LOCUS       DASRPQ010000001         1214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_313488, whole genome shotgun sequence.
ACCESSION   DASRPQ010000001 DASRPQ010000000
VERSION     DASRPQ010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_313488"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..647)
                     /locus_tag="VFD73_00005"
     CDS             complement(<1..647)
                     /locus_tag="VFD73_00005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72414.1"
                     /translation="MRDHESSRPRVLVLLGTAYFPPFIDDLAELHREGMGPRAWLLEL
                     PYELTQLDQRFLTGPPAWLLALYRRIPMWAAQTLEAFRVRRRYDVVFSWHAGPVALSF
                     ALLLKLTRSRVPMVAIFSWISRPKKAWFLRLVQSHITKLILPPPTQLEFAIDRLRLPA
                     AKVVGIPWSVDEQFWRSPPDVIPDMICSAGREMRDYETLIEALDGTGIRCHIAGAL"
     gene            917..>1214
                     /locus_tag="VFD73_00010"
     CDS             917..>1214
                     /locus_tag="VFD73_00010"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HZI72415.1"
                     /translation="MSDDRGQWPLVSVIVPTRGRPELVRQALSSVIGQTYPGAIECIV
                     VHDQEPPQPELAGLGTANRSVRVVSNSRSPGLAGSRNTGVALARGEFIASCDDDD"
BASE COUNT          240 a          403 c          390 g          181 t
ORIGIN      
        1 agcgcgccgg cgatatgaca gcggatgccg gtaccgtcaa gcgcctcgat gagcgtctca
       61 taatcgcgca tctcccgccc cgccgagcag atcatgtcgg gtatcacatc gggaggtgac
      121 cgccagaatt gctcatcgac actccaggga ataccgacca ctttggccgc gggcagccgc
      181 aagcgatcga tggcgaattc gagctgggtg ggaggcggca ggatcagctt ggttatatgc
      241 gattgcacca gccgcagaaa ccaggccttc ttgggacgcg aaatccagct gaaaatggcc
      301 accataggca cccgggagcg ggtgagcttg agcagcaggg caaacgacag cgccaccggt
      361 cccgcatgcc aggagaacac cacatcgtag cggcgccgga cccggaaggc ctccagcgtc
      421 tgcgcggccc acatcgggat cctgcggtaa agagctagca gccatgcggg tgggccggta
      481 aggaaccgct ggtctagctg ggtcagctcg taagggagct ccagcagcca ggcacgcggg
      541 cccatgcctt cccggtgcag ttcagcaagg tcgtcgatga acggcggaaa gtaagcagtc
      601 cccagcaaca ccagcacgcg cggccggctg ctttcatgat ccctcataac caggccttac
      661 gacggggtca ttactgcacg gcaatccgaa cgcaattgcc ggtcaccacg aaggtgaccg
      721 gtcaccacac ggcagagcat accgcctccc cggaacgtag aaccgctctg actcctgcag
      781 acacccacag aaaccaacgt accggcatgc cagccggcag cgtcgctgcc ggtcccggcg
      841 ctgccggtcc cggcgccagg gctgggcctg cgccgctatg gacatcgctg ccggttatcc
      901 gtaacttggt atgactgtga gtgatgaccg cgggcagtgg cccctcgtct cggtgatcgt
      961 gcccacgcgc gggcgcccgg agctagtccg gcaagcgctc tcctcggtca tcggccagac
     1021 gtacccaggg gcgatcgagt gcatcgtggt ccacgaccag gagccgccgc agcctgaact
     1081 ggcagggctc ggtaccgcca accgcagcgt ccgggtcgta tcgaacagcc ggtcgcctgg
     1141 cctggcgggc tcccggaaca cgggcgtcgc cctggctcgc ggcgagttca tcgcgagttg
     1201 cgacgacgac gacg
//
LOCUS       DASRPQ010000002         1035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_940499, whole genome shotgun sequence.
ACCESSION   DASRPQ010000002 DASRPQ010000000
VERSION     DASRPQ010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_940499"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..885)
                     /locus_tag="VFD73_00015"
     CDS             complement(<1..885)
                     /locus_tag="VFD73_00015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72416.1"
                     /translation="MPVTGTWQVVPSPAIDVSSSTFGAKLNAVAVVSATDIWAVGFGP
                     QPGGPAYAKQTLIEHWDGTSWRIVPSPKPPSTYAQVELDSVFALAANDVWAVGFGENP
                     AGLVSPADITLVEHWDGTSWGIVPSPNPDQEVNQLHSIAGVASNDLWAVGQRGEGSAA
                     CCPYESLIEHWNGTSWSVAPNPGQAALQGITAVAANDVWAVGTPAAGGGDIIEHWDGT
                     AWSTVAAPVANANGGGISLRAVTAVSATDIWAVGDQENPLIGEGGTYDSVTEHWNGSV
                     WTLTGLNIQDSVLEGVVAT"
     gene            875..1024
                     /locus_tag="VFD73_00020"
     CDS             875..1024
                     /locus_tag="VFD73_00020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72417.1"
                     /translation="MTGTGVGVGLGVALAVGVAVGVGVAVAAAVGVGFGLGFAPASAV
                     EPELI"
BASE COUNT          165 a          336 c          349 g          185 t
ORIGIN      
        1 cgtcgccacg actccttcaa ggactgagtc ttgaatgttg agtcctgtga gcgtccagac
       61 gcttccgttc cagtgttcgg tcaccgaatc atacgtgcca ccctcaccaa tcagcggatt
      121 ttcctggtcc cccactgccc agatatccgt cgccgagacg gcagtgaccg cacgcagact
      181 gatgccgccc ccgttggcat tggcaaccgg ggccgctaca gtggaccagg cggtcccgtc
      241 ccagtgctcg atgatgtcac ccccgcccgc agcaggcgtc cccacggccc acacatcgtt
      301 ggccgctacg gcggtgatgc cctggagcgc ggcctgtccc ggattgggcg ccacggacca
      361 gctcgtcccg ttccaatgtt cgatcaacga ctcgtacggg cagcacgcgg cgctgccctc
      421 cccgcgctgg ccgacggccc agaggtcatt gctggcgacg ccggctatcg agtgaagctg
      481 gttcacctcc tgatctgggt tggggctggg cacgatgccc caactggtgc cgtcccagtg
      541 ctcgacgaga gtaatatcgg cgggcgagac gaggccggcg ggattctcgc cgaagcccac
      601 cgcccaaaca tcattggcgg ccagcgcaaa gaccgaatcc agctccacct gggcgtaggt
      661 cgagggaggc ttcgggctgg gtacgatgcg ccagctcgtg ccatcccagt gctcgatcaa
      721 ggtctgcttg gcgtacgctg ggcctcctgg ctgcgggcca aaacccacgg cccagatgtc
      781 ggtggcggag acgaccgcga ccgcgttgag cttggcgcca aacgtgctgc tggatacatc
      841 aatggcaggg ctggggacaa cctgccaggt tccggtgaca ggcacaggtg tgggcgtggg
      901 actgggcgtc gcgctggccg tgggtgtcgc ggtcggggtg ggagtcgcgg tggccgcggc
      961 ggtcggggtt ggttttggtt tgggtttcgc cccggcgagc gcagtagagc cggagctcat
     1021 ctgagaccac aggct
//
LOCUS       DASRPQ010000003         1671 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3762473, whole genome shotgun sequence.
ACCESSION   DASRPQ010000003 DASRPQ010000000
VERSION     DASRPQ010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3762473"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..417)
                     /locus_tag="VFD73_00025"
     rRNA            complement(<1..417)
                     /locus_tag="VFD73_00025"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            complement(694..>1671)
                     /gene="tyrS"
                     /locus_tag="VFD73_00030"
     CDS             complement(694..>1671)
                     /gene="tyrS"
                     /locus_tag="VFD73_00030"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HZI72418.1"
                     /translation="GDFTGMIGDPTGRSETRRPLTWEEIRENAETYKAQLGKVLDMGR
                     TQVRFNSEWLAPLTFEQIIRETAHLTVARILQREDFAARYAAGRPISLHEFLYPLAQG
                     YDSVALGADVELGGTDQTFNLLVGRDLQRAHGQEPQIALTVPILEGLDGVQKMSKSLG
                     NYVGINEPPADMYGKLMSVSDALMFRYFELATRVAEEEMAALRSLHPMEAKKRLARTI
                     TAMYHGEEGAAAGEAHFARVVQSKEAPENIEEVRIPTGAAQEPLWKVLARAGLVASGS
                     EGRRMIQQGAVELDGRPIHDLNHAVVTSSTPHLAKVGKRRFKRFVLVKE"
BASE COUNT          272 a          561 c          516 g          322 t
ORIGIN      
        1 cacgcggcgt cactccgtca ggctttcgcc cattgcggaa aattccccac tgctgcctcc
       61 cgtaggagtc ggggccgtgt ctcagtcccc gtgtggctgg tcgtcctctc agaccagcta
      121 cccgtcatag ccttggtggg ccgttacccc gccaactagc tgataggccg cgagcccctc
      181 caagagcggc agcttgcgcc acctttcctc cccgatcttt caaccgagga acgtatccgg
      241 tattagcccc cctttcgagg gggtatcccg aactctaggg caggtcaccc acgtgttact
      301 cacccgtgcg ccactaggat cgccaatgta ttgctacacc gatgatcctc gttcgacttg
      361 catgtgttaa gtacgccgcc agcgttcgct ctgagccagg atcaaactcg ccataatgat
      421 tcgacaaatc tgaagcctgg tccctaaagc ccaaccaaga tgttgcttcg gtcgagcgca
      481 aggtactcag tagttacgga tgggtgctca cacttcttcg gtgagccagt aacatatgcg
      541 attttcaaag agcggcgggg cgtgaacccc tcgggttgaa tcgaggccag cggactacag
      601 cggaccggct gacttctctc aacgcccccc tgcggcttgc accggaggga tgggcaagga
      661 gtgatgatac ggatcggtca cagagctgtc aagctattcc ttgaccagga cgaatctctt
      721 gaagcgtcgc ttgccgacct tggcgagatg gggcgtcgag gaggtcacca cggcgtggtt
      781 caggtcatga atcggccgac cgtcgagttc caccgcgccc tgctggatca tgcgtcggcc
      841 ttccgagccc gaggccacca ggccggcccg ggccagcacc ttccagagcg gctcctgggc
      901 ggcgccggtc gggatccgaa cttcctcaat gttctccggc gcttccttgc tctggaccac
      961 ccgagcgaag tgcgcctcgc cggccgcggc cccctcctcc ccgtggtaca tcgcggtgat
     1021 cgtccgggcc aggcgcttct tggcctccat cgggtgcagg ctccgcaggg ctgccatctc
     1081 ctcttccgcc acccgggtgg ccagctcgaa gtagcggaac atgagcgcgt ccgacaccga
     1141 catgagcttg ccgtacatgt cggcgggcgg ctcgttgatg cccacgtagt tgcccaggct
     1201 cttggacatc ttctggacgc cgtcgagccc ttccaggatc ggcacggtga gcgcgatctg
     1261 cggctcctgc ccgtgcgcgc gctgcaggtc gcgcccgacc agcaggttga acgtctggtc
     1321 ggtgccgccc agctccacgt cggccccgag cgccaccgaa tcgtagccct gggcgagcgg
     1381 gtagaggaac tcgtggaggc tgatcggccg gcccgccgcg taccgcgccg cgaagtcctc
     1441 gcgctggagg atgcgagcca ccgtcaggtg cgcggtctcg cggatgatct gctcgaaggt
     1501 gagcggggcg agccactccg agttgaagcg cacctgggtg cgccccatgt cgagcacctt
     1561 gccgagctgg gccttgtagg tctccgcgtt ctcgcggatc tcctcccagg tgagcggacg
     1621 gcgggtctcc gatcggccgg tgggatcgcc gatcatgccg gtgaaatcgc c
//
LOCUS       DASRPQ010000004         1305 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3762487, whole genome shotgun sequence.
ACCESSION   DASRPQ010000004 DASRPQ010000000
VERSION     DASRPQ010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3762487"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(464..775)
                     /locus_tag="VFD73_00035"
     CDS             complement(464..775)
                     /locus_tag="VFD73_00035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72419.1"
                     /translation="MVNAVRSTGVTVVGMGWYRSKDWKRLLQVISDRDEMYDSHAEWL
                     AEAQRAERAVAAEGIQVKRVPVDPDELAAWCVIRGRTPNAAARAEFVTDKLQREAQQR
                     R"
     gene            complement(880..>1305)
                     /locus_tag="VFD73_00040"
     CDS             complement(880..>1305)
                     /locus_tag="VFD73_00040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72420.1"
                     /translation="LGVAARLEARGIATEQGALVREVRAEREEQRSLVNELRGWLTEK
                     ARQVAERAHAFKDALRERLAGLAGADLSSLRQANLEVALARWDRGQEHLLTGQERSQV
                     AEHRTAEAERQRQAELERAQAQEREGPRLRRIRSLGLER"
BASE COUNT          232 a          477 c          348 g          248 t
ORIGIN      
        1 aaatacaagg tctgctgcgg tcgcctccac tgaagccgcc gtagggcttc cattctgcat
       61 cagagttctg catcaaaaaa gcccaacggt ctcaagagct cggcgctgat gcaaaactca
      121 taagttctgc aacacagcta caggttcttg cagcagacga accccaggcc cgaactcatc
      181 ggcggggatc aagagtacct caccctcact caagcgtgag cacgatccga acggcggaat
      241 tgcaattgag caggtctggg gcagctaacg ccgagccatt cgggccgtcg ggggcaccga
      301 aaagcgtgaa aaccagtgag agcgtgggcc ggcacatagg acgggcagga tagtacgctg
      361 agctatgtgc caaccccagt ccgaggtgcc tttatcgatg tcatccttga cacgaatagc
      421 cgccccccat cgctgcctga gcaggctact ctcctgcgca agcctaccgt cgctgctgtg
      481 cctcgcgctg cagcttatcg gtcacaaact ctgcgcgggc cgcggcgttt ggtgtgcgac
      541 cacggatcac gcaccaagcc gccagctcgt cgggatcgac cgggaccctc ttgacctgga
      601 tgccctcggc cgccacagcc cgctcggccc gctgcgcctc ggccagccac tccgcatggc
      661 tgtcgtacat ctcatccctg tcggagatga cttggagcag gcgcttccaa tccttggagc
      721 gataccagcc catgccgacg acggttacac ccgtggaccg taccgcgttc accatggttg
      781 gaggcctatc ccgactattc ctgctctgtt cagtttagcg tgctattcca ctcaatgtcc
      841 cgaccttcag cggcctaaac caactgagcc cttcagcggc tatcgctcca agccgagact
      901 ccgtatccgt ctcagccgcg gtccctcacg ctcctgtgct tgtgcgcgct ccagttctgc
      961 ttgtctctga cgctcggcct ccgcggtccg gtgctccgcc acctgcgatc gctcttggcc
     1021 ggtcagaagg tgttcctggc cgcgatccca ccgtgctaac gccacctcca agttcgcctg
     1081 acggaggctg ctcaggtcgg caccggcgag ccctgccaaa cgctcccgca gcgcatcctt
     1141 gaacgcatgc gctcgctccg ccacctgccg cgccttctcg gttagccacc cgcgcagttc
     1201 gttcaccagc gaacgctgct cctccctctc ggcccgaacc tcgcgtacca gcgcgccctg
     1261 ctccgtcgcg atcccccgcg cttccagccg cgccgccacc ccgag
//
LOCUS       DASRPQ010000005         1483 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2509073, whole genome shotgun sequence.
ACCESSION   DASRPQ010000005 DASRPQ010000000
VERSION     DASRPQ010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1483
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2509073"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..313
                     /locus_tag="VFD73_00045"
     CDS             <1..313
                     /locus_tag="VFD73_00045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72421.1"
                     /translation="TPTIAPPAPSTPRWRLTAEEEATTLAELKQAAAGWAALLAKCAG
                     LALGYGEHQLDAARYRHIAELCVAAGVDQTLVEAWIEVGRQRASAAAVTTHRACVLWD
                     S"
     gene            558..770
                     /locus_tag="VFD73_00050"
     CDS             558..770
                     /locus_tag="VFD73_00050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72422.1"
                     /translation="MDVEKLSVNLSSDDPAIGLRASLALHRLAERVEANHVASAREKG
                     WSWQQIGDALGVTRQSVHTKYTKESS"
     gene            767..1279
                     /locus_tag="VFD73_00055"
     CDS             767..1279
                     /locus_tag="VFD73_00055"
                     /inference="COORDINATES: protein motif:HMM:NF014862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
                     /protein_id="HZI72423.1"
                     /translation="MTTESVVPEMLHGWAIYLRASEEARRRGDRRTGTDHILLALLED
                     PSIEVVLGVSLQQARQALDSLDQEALGALGLGSGLDAPELPMRAVPKRPRIRDIAQKD
                     RLRMTPAAKKVLEEASKPNRRRLKVTAQQVLAQILTLQPPDPAAVLLGALGVNTSEVR
                     RRLDAVTPGS"
BASE COUNT          279 a          499 c          468 g          237 t
ORIGIN      
        1 cacacccacc atcgcgcctc cggcaccttc cactccccgc tggcggctga ccgccgaaga
       61 agaagcaacc acgcttgccg aactcaagca ggccgccgcc ggatgggccg ccctgctggc
      121 caagtgcgcc ggcctggccc tgggctacgg cgagcaccag cttgacgcgg cccggtaccg
      181 ccacattgct gagctgtgcg tggccgccgg ggtggaccag acgctggttg aggcctggat
      241 cgaggtgggg cgccagcggg ccagcgctgc ggcggtcacc acccacaggg cctgtgttct
      301 ctgggacagt taacctggta aaacgcatca ccgaccagcc ggtggggagc gtatggggga
      361 agagcacgcg ttgtgagtgt caacgttggc ccgtcggctc cccagcctgg ctgattcaag
      421 atctcaatag ccagccgacg cagtgcaccg ggcaggcgtg gatcccgcga cccggccatc
      481 tggggcactt cggtgtggcg atctgccgtg tcagtttaga ttgacaaaat caaggacgtc
      541 agtctatact gacaggcatg gacgtcgaaa aactcagcgt gaatctctcg tcggatgacc
      601 cggcaattgg gcttcgcgcc tcgttggcgc tacatcgcct ggctgagagg gtcgaagcga
      661 accacgtcgc gtcggcccgg gaaaagggct ggtcgtggca gcagatcgga gacgctttgg
      721 gcgttacccg ccaatccgtg cacaccaaat acaccaagga gtcatcatga ccaccgaatc
      781 cgttgtgcca gagatgcttc acggctgggc catctatctg cgggccagtg aggaggctcg
      841 ccgccgaggt gatcgccgaa ctggcaccga tcacatcttg ctcgccttgt tggaggatcc
      901 ctcgatcgaa gtcgtgttgg gcgtgagcct gcagcaagct cgccaggccc ttgactcgct
      961 cgatcaggaa gctttgggcg ctctgggcct gggctccggc ctcgacgctc ccgaactgcc
     1021 gatgcgcgcc gtgccgaaga ggccgaggat cagagacatc gcgcaaaaag atcgcctccg
     1081 catgacgccc gcggcaaaga aagtgcttga ggaagcgtct aagcccaacc gtcggaggct
     1141 caaggtcacg gcccagcagg tgctagccca gatcctcact ctccaaccac cagatcctgc
     1201 ggcggtgctg ctgggcgctc tcggcgtgaa cacatcggag gttcggcgcc gattggatgc
     1261 ggtcacgccc ggcagctgag cccagcgacc ttcacgaccc cgagcgaagg cgcccggacc
     1321 gggccgccta ccggcagcca acaaccgcca gcgctgacct ctgcagaccg ctcctcaacg
     1381 gccacaattc accgcgacgc ctgccagctc gtggcggaga agcccgcagc catcccaccc
     1441 ctcgggcagc cccaaacgtg cgcttcttcg ggccctgcgg gta
//
LOCUS       DASRPQ010000006         1879 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1568082, whole genome shotgun sequence.
ACCESSION   DASRPQ010000006 DASRPQ010000000
VERSION     DASRPQ010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1879
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1568082"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..208)
                     /locus_tag="VFD73_00060"
     CDS             complement(<1..208)
                     /locus_tag="VFD73_00060"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase family
                     protein"
                     /protein_id="HZI72424.1"
                     /translation="MPGAGWYVDLVTVVRINAITVPAESGDELARRFAARAGAVDDQD
                     GFEGFELLKPTDGRTTWLVVTRWRD"
     gene            complement(235..414)
                     /locus_tag="VFD73_00065"
     CDS             complement(235..414)
                     /locus_tag="VFD73_00065"
                     /inference="COORDINATES: protein motif:HMM:NF016070.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF397 domain-containing protein"
                     /protein_id="HZI72425.1"
                     /translation="MTNEPTWRTSSYSGQGNCVELADRGGRVLVRDTKQAGTGPVLAF
                     SAPAWRRFARELKER"
     gene            complement(567..1022)
                     /locus_tag="VFD73_00070"
     CDS             complement(567..1022)
                     /locus_tag="VFD73_00070"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Scr1 family TA system antitoxin-like
                     transcriptional regulator"
                     /protein_id="HZI72426.1"
                     /translation="MIDASSSALGFFAAEVVRLRKARRLSQPALAKLLNYSPSQVAKI
                     ETAERIPKRPLALRLDEVFQADGHFARLQALVENTSVLPWFRDLYLVEGEATELRTYE
                     SYLIPGLLQTESYARAALEAASRDHHSGDRERAGHLLRIWPGVRRSVVR"
BASE COUNT          362 a          608 c          567 g          342 t
ORIGIN      
        1 cgtcccgcca ccgggtcacg accagccagg tggttcgtcc gtcggtcggc ttgagcagct
       61 cgaagccctc gaagccatcc tggtcgtcga ccgcgccagc ccgggcggcg aaccggcggg
      121 caagctcgtc cccgctctcg gcgggtaccg tgatcgcgtt gatcctcact accgtcacca
      181 ggtcaacgta ccaaccagcg cccggcaccg agctactgcc tgggtcgaag atctctagcg
      241 ttccttcagt tcgcgggcga accggcgcca ggccggcgcg ctgaaggcca gcacgggacc
      301 ggtaccagcc tgcttggtgt cgcggacgag cacccggccg ccccggtcgg ccagctcgac
      361 gcagttgcct tgacccgagt atgaggatgt ccgccaggtt ggttcattgg tcatttgcaa
      421 ggctccgaat cagctcagcc gacttgctgt ccggcagcgc cgacgcacgt agatgatcga
      481 aggccaggca gtagcggtca acttcttctc tcttccggac gtaccgggcc gatcctatgt
      541 cctcgatgta gaccagatca ccctggctat cgaacgacag aacgacgaac gcccggccat
      601 atgcgcaaca gatgccctgc ccgctctcga tcacctgaat ggtgatctct ggacgctgcc
      661 tccagcgccg ctctcgcgta actctcggtc tggagcaatc cggggatcag gtaggactcg
      721 tacgtccgca gttccgtggc ctcaccttcg accaggtaaa gatcacggaa ccacggcagg
      781 accgaggtgt tctccaccag agcctgtagc cgggcgaagt ggccgtcagc ctggaatacc
      841 tcatccagcc tcagcgccaa cgggcgcttc ggaatccgtt cggcggtttc gattttggca
      901 acctgagatg ggctgtagtt cagcagcttc gccagcgcgg gctgagaaag ccgccttgcc
      961 ttacggagcc ggacgacctc cgctgcgaag aatccgagcg cgctggacga tgcatcgatc
     1021 atcagggctt caccccgtac aactctgggg gatctcgtac accaacagcc gtcatctgca
     1081 cagcgattac cgacattcgg acagttctgg ccgtccacgt gtggctactt ctcaacgtta
     1141 gtcctggctt gggatcttag gtagcgggac cgcgtatccg gcgtaaaaca gccaagtgct
     1201 gcgctcaaac tcggggacgc ggtcctctcc acagacgacc gaatacgcgg agggataagt
     1261 agcagatgcc cattgattcg acgaacgtcg cgccgccgga acatccattg ccgaggctgg
     1321 ccacattcga gctgacgaga taccggcgcg aactcgaaag agccctaaaa cgactgccca
     1381 ccgactccgg cgcgcggccg ggtctcctgg gacagttgag cgaggtactg gctgagcagg
     1441 aatcgcgcga gaggatcgcg aacgcgtctg tcagccggaa gagcccccgt ggactgtgaa
     1501 gccccagacc acctggcgga gcgcttcctc cgcgggaccg cggaaaacca gttgcctgat
     1561 gcccgctgtc cgaagatcat ggcggacatg gatcactagg cagtggcacg cgtgcggagt
     1621 gaaggcgggt tcgagttact ccctgtctcc ccggtacgca actcgaggtc cgcgcttctt
     1681 gatgaatgcg ggcttctttc acgcgacgtg atatgcgacg tcgcgctagc cggcgtaaac
     1741 gctggccgca tgccactgga tctaggaggc agttcgcggt gccctgaccg ctgccttcac
     1801 aagccttgga attcgcgaag ctatgaacga tttccgtaat aatggtatgc ccgcggcagc
     1861 taccggatct gacgccagc
//
LOCUS       DASRPQ010000007         1183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_941256, whole genome shotgun sequence.
ACCESSION   DASRPQ010000007 DASRPQ010000000
VERSION     DASRPQ010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_941256"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..391
                     /locus_tag="VFD73_00075"
     CDS             <1..391
                     /locus_tag="VFD73_00075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72427.1"
                     /translation="MRMGTRVSALAAVACSTLAIAGVALAGAAKSVPTKVTIRPPNSK
                     TTTLHGKVYSTNKSCWTRTIEVHQIQGPAQNPSKDKVVATTTSKAGHGNGFWKLSSDP
                     HPGRYYARATKKAGCRPGSSKLLHLTS"
     gene            complement(961..>1183)
                     /locus_tag="VFD73_00080"
     CDS             complement(961..>1183)
                     /locus_tag="VFD73_00080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72428.1"
                     /translation="HLTPAALAEALLQAHALRAVELDINPDWVAGFLYAHHSLRGRPV
                     PLPVLDGQTTIPGDYLTPWSRDFFTIVAR"
BASE COUNT          214 a          394 c          383 g          192 t
ORIGIN      
        1 catgcgtatg gggactcgtg tctcagcgct cgctgcagtc gcatgcagca cgttggccat
       61 cgccggcgtt gcactggccg gagccgccaa gtcagttccg accaaggtca ccatcaggcc
      121 gcccaacagc aagaccacca cactccatgg caaggtctac agcacgaaca agagctgctg
      181 gacgcggacc atcgaagtgc accagattca ggggccggca caaaacccgt ccaaggacaa
      241 ggtcgtggct acgacgacct ccaaggcggg ccacggtaat gggttctgga aactttcctc
      301 ggacccccat cccggccgct actacgcccg ggctaccaag aaggccggct gcaggccagg
      361 gtccagcaag ctgctgcacc tgacttcatg atctaggccg acggggagcg gagggtctct
      421 ccgctccccg tcgccgaaac tgagagcccc cagcttcgtc gcagatcccg acggcgactc
      481 gcctctagga ttagcaactg cgatggagag cgctcagact ccccagttcc cgctcaccgg
      541 cggctgtggc tgcggggcgg ttcgctttga ggtgaccgcg cccctggctt cctcggacta
      601 ctgccactgc acccggtgcc agcgtcgcac cggcaccgcg gcttcggcta acgcacgccc
      661 agcgccaggg tcgtttcgca tcgtcggggg ggcggtgcat ttgcgagcgt ggcgaccgcc
      721 gggcggtttc gaaaagcttt tttgcaatga gtgcggctcg gcggtgttca gccgtcaccc
      781 cgaggacctc aatcgcgtga gcatccggtt gggcgagttc gattcggatc ccggtatccg
      841 accgagtgcc cgtcagttcg tcgcctatgg ggcgccgtgg gaaccgatcc ccgatgacgg
      901 cctcccgcgg taccccgaga gctctccctg agaccaaacg cgccgcccgc aaggcgcgcc
      961 tcagcgggcg acgatcgtaa agaaatcccg gctccaaggg gtcaggtaat cgcctgggat
     1021 ggtggtctgg ccatccagta ccggaagcgg cacgggccga ccgcggagac tgtgatgcgc
     1081 atagagaaac ccagccaccc agtcgggatt gatgtcgagt tcgaccgcgc gtagcgcgtg
     1141 cgcttgaagg agcgcttcgg cgagcgcggc gggcgtgagg tgc
//
LOCUS       DASRPQ010000008         1003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2509374, whole genome shotgun sequence.
ACCESSION   DASRPQ010000008 DASRPQ010000000
VERSION     DASRPQ010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2509374"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..513)
                     /locus_tag="VFD73_00085"
     CDS             complement(<1..513)
                     /locus_tag="VFD73_00085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72429.1"
                     /translation="MASRSPSEISSRELALIDALGSGCVVECSKLTVEQLAATDDPRC
                     SVRAELLRELVLGRSGEPLDPLGVRLHGARITGTLDLTHVPAVVGLELRNCFFEHPVL
                     LVSARLPWLTLAGSQLSVLDGDGLQVDGDVLLGDGFTATGDDDNGAVRLLGAHIKGQL
                     NFNGARLSNDA"
     gene            619..>1003
                     /gene="nadD"
                     /locus_tag="VFD73_00090"
     CDS             619..>1003
                     /gene="nadD"
                     /locus_tag="VFD73_00090"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: protein motif:HMM:NF000840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HZI72430.1"
                     /translation="MSGRRLGVMGGTFDPIHHGHLVAASEVQARFGLDQVVFVPTGIP
                     WQKDEREVSPAEDRYLMTVIATASNPRFSTSRVDIDRRGPTFTVDTLTDLRTQFPRQE
                     MYFITGADALAQILSWERVDELFDLA"
BASE COUNT          187 a          324 c          309 g          183 t
ORIGIN      
        1 agcgtcgttg ctcagcctgg cgccgttgaa gttgagctgg cccttgatgt gggcaccgag
       61 tagccgtact gcgccgttgt catcatctcc ggtggctgtg aagccatcac cgagcaacac
      121 atcgccatcg acttgaagac cgtcaccgtc tagcaccgac agctgcgaac ccgccagagt
      181 caaccacggc aaccgggcac tgaccaggag cacgggatgt tcgaaaaaac agttccgcag
      241 ctcgaggccc accacggccg gaacgtgggt taaatcgagg gttccggtga tccgggcgcc
      301 atgtaggcgc acgcccaacg ggtcaagggg ttcaccgctg cggcccagca ccaactcccg
      361 cagcaactcg gcccggacgc tgcaccgcgg gtcatccgtg gcagccagct gctcgacggt
      421 gagtttgctg cactcaacta cgcagccaga tcccaaggcg tcgatcagcg cgagttctct
      481 ggacgagatc tcgctggggc ttctgctcgc cacgactgtc ccaccaccgg ttgcttagtg
      541 aagcgcaggc ctactggagt gaacgttcag cttatctccg cgggaggcga tcaggggcga
      601 ctcgcctagg ctgcgcccat gtccggccgg cgactcgggg tcatgggagg cacctttgac
      661 ccgatccatc acggtcatct ggtggccgcc agcgaggtgc aggcacgttt cgggctggat
      721 caggtcgtgt ttgtaccgac cggaatccca tggcagaaag atgagcgcga ggtcagcccg
      781 gccgaagatc ggtatctcat gacggtcatc gccaccgcgt ccaacccgcg gttctccacc
      841 agccgggtgg atatcgaccg ccgcggtcca acgttcactg tcgacactct gacggatctg
      901 cgtacccagt ttccccgcca ggagatgtac ttcatcacgg gtgctgacgc gttggcgcag
      961 atcctgtcct gggagcgagt cgatgagttg ttcgacctcg cgc
//
LOCUS       DASRPQ010000009         1334 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1254896, whole genome shotgun sequence.
ACCESSION   DASRPQ010000009 DASRPQ010000000
VERSION     DASRPQ010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1334
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1254896"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1334)
                     /locus_tag="VFD73_00095"
     CDS             complement(<1..>1334)
                     /locus_tag="VFD73_00095"
                     /inference="COORDINATES: protein motif:HMM:NF012361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HZI72431.1"
                     /translation="GRPFVFYEGPPTANGRPGIHHVFARTIKDLVCRYHAMLGESVTR
                     IAGWDTHGLPVEIEVEKELQLSGKKDIERFGVEAFNARARKSVFRYQAEWENLSDRIG
                     YWLDYDHPYITCSNRYIESVWWLLHRLHERELLYRGHRVLPYCPRCGTVLSSHELAQG
                     YEDVTTNSVYLTFPLEDDPSRQLLVWTTTPWTLVSNVAVAVHPEMEYGEYRVGDRRII
                     LATSRASLPSSSAKGAPSFAELGAERTFPGSELLGLRYRRPLEVVPLPEDKSSRVVVP
                     GSFVTAEDGSGLVHMAPAFGADDFQAGVEHSLALVRPVAPDGTFTGTSWPELEGKLVT
                     ARDTNDLIIARLKRDGRWHLTEPYEHKYPHCWRCSSPLIYYARDSWFIRTSAVKERML
                     ELNRQVDWHPPEVGAGRFGEWLENNVDWALSRDRYWGTPLPVWVCDQDSSHI"
BASE COUNT          240 a          441 c          420 g          233 t
ORIGIN      
        1 tcgatgtgcg acgagtcctg atcgcacacc cacaccggga gcggcgtacc ccagtagcgg
       61 tcgcgggaga gcgcccagtc cacgttgttc tccagccatt cgccgaatcg tccggctccc
      121 acctccggag ggtgccagtc gacctgccgg ttcagctcca gcatccgctc tttcaccgcg
      181 gaggtccgga tgaaccagga atcccgggcg tagtagatca ggggactcga gcaacgccag
      241 cagtggggat acttgtgctc gtacggctcc gtcagatgcc agcgaccgtc gcgcttgaga
      301 cgagcgatga tgagatcgtt cgtgtcccgg gcggtcacca gctttccctc gagctcgggc
      361 cagctggtgc cggtgaacgt tccgtcaggc gccaccggcc gcaccaacgc gagactgtgc
      421 tcgacgcccg cctggaagtc gtcggctccg aacgcgggcg ccatgtgcac cagccccgag
      481 ccgtcttccg cggtaacgaa gctgccgggg accacgactc gggaactctt gtcctccgga
      541 agcggcacca cttccagcgg ccttcggtaa cgcaggccca gcaactccga gccgggaaac
      601 gttcgctcgg ctcccagctc ggcaaagctc ggtgctcctt tggccgaact gctgggcagc
      661 gaggcgcgcg aggtggcgag aatgatccga cgatctccga cccggtactc gccgtattcc
      721 atctcggggt gaaccgcgac ggccacgttg gagaccagag tccacggcgt agtggtccag
      781 accaaaagct gccgggaagg atcgtcctcc agcggaaacg tcaggtagac cgagttggtg
      841 gtgacatcct cgtagccctg tgccagctcg tgactggaga ggaccgtgcc gcagcgggga
      901 cagtacggca gaactcgatg accccggtac agcagctcac gctcgtgcag ccggtgcaac
      961 agccaccata cgctctcgat gtaccggtta ctgcaggtga tgtaggggtg gtcgtagtcg
     1021 agccagtagc cgatccggtc cgagaggttt tcccactccg cctgatatct gaacacgctc
     1081 ttgcgggccc gggcgttgaa cgcttcgacc ccaaaccgct cgatgtcctt cttgccgctg
     1141 agctgaagct ccttctccac ctcgatctca accggcaggc cgtgagtgtc ccaaccggcg
     1201 atgcgggtca ccgactcacc cagcatagcg tggtaccggc agaccaggtc cttgatcgtc
     1261 ctggcaaaga cgtggtggat tcccggcctg ccattggcgg tgggtgggcc ctcgtagaag
     1321 acgaacgggc gtcc
//
LOCUS       DASRPQ010000010         2012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1568327, whole genome shotgun sequence.
ACCESSION   DASRPQ010000010 DASRPQ010000000
VERSION     DASRPQ010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1568327"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(185..1378)
                     /locus_tag="VFD73_00100"
     CDS             complement(185..1378)
                     /locus_tag="VFD73_00100"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HZI72432.1"
                     /translation="MAEASARRRGHGEDSIYFAAAKNRYVGAVSVGHTPEGKRIRRKV
                     YGRTKQDVRDKLKALHQELNAGIRSSAGYTVRDAVEDWLREGLDGRSERTRALYEGLL
                     EPVLEIIGTRPLRDLSAREVRSALSQLTSRYSSRSLQITRNSLDRTIRHAQAYDLVAR
                     NVAALVKPPRGRTGRPSQSLTLEQAKALLAATEGTRMHAYVALSLLAGIRTEEARALR
                     WDHVVTWADDAAGWQPITTPRFDHARAGEDRFAIYVWRSQRHGGDTKTGKSRRTLALP
                     RRCVEALRGHRKLQAKDRIRAGALWQDRGLVFSSRVGTPLSANNVIRSFRRITEKAGL
                     GQDWVPREMRHTFVSVLSANGVPVESIALLAGHDRTATTELVYRHEIRPALTQGAEVM
                     DRIFD"
     gene            complement(1455..1527)
                     /locus_tag="VFD73_00105"
     tRNA            complement(1455..1527)
                     /locus_tag="VFD73_00105"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1492..1494),aa:Arg,seq:cct)
     gene            1667..>2012
                     /locus_tag="VFD73_00110"
     CDS             1667..>2012
                     /locus_tag="VFD73_00110"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HZI72433.1"
                     /translation="MQVRDVMTEATVTDSTTDTLRSAAERMWREQTGSLLILDGERLA
                     GIITERDLLRAVALGADPATATVDEAMTTEVFTVPPDMPLLDAAREMATRWIRHLPVE
                     DDGQLVGMVSMRD"
BASE COUNT          318 a          684 c          664 g          346 t
ORIGIN      
        1 tagacctgtc gcacatcagc tggcggacat gtggcgcgga ctgttggcgg atcacacggg
       61 cggcggatca tatcctccgt caggtgatgc gcgacacacg tccgccaaga gttcatgcct
      121 ggtggtagtg cacacgtcca tgcctaccgg tcgcacaccg agcgggcggc gacccagcgc
      181 actgctagtc aaagatccgg tccatcacct ctgcgccctg ggtaagcgca ggccggatct
      241 catggcggta gaccagttcg gtagtggcgg tccggtcatg ccccgccagc agcgcgatgc
      301 tctctaccgg aacgccgttg gcggatagga ccgacacgaa cgtgtgcctc atctcacggg
      361 gtacccagtc ctgcccgagc cccgcctttt cagtgatcct ccggaaggag cggatcacgt
      421 tgttcgcgct cagcggcgtg ccgactctgg aagagaagac caggccgcgg tcctgccaca
      481 gcgcccccgc ccgtatgcgg tccttcgcct ggagcttccg atgcccccgg agtgcctcga
      541 cgcaacgccg gggaagtgcc agggtcctcc gtgacttccc ggtcttggtg tctcccccgt
      601 gccgctggga acgccagaca tagatcgcga agcggtcctc tcccgcccgt gcatgatcga
      661 accggggcgt ggtgatcggc tgccatccgg cagcatcatc ggcccacgtc accacgtgat
      721 cccaccgcag ggcccgggcc tcctcagtgc ggatgccagc cagcaggctc agtgccacat
      781 aggcgtgcat gcgcgtgccc tcggttgcgg cgagtagggc ctttgcctgc tccagcgtca
      841 agctctgcga cggtctgcca gtgcggcccc tcggtggttt caccagcgcg gcgacattgc
      901 gcgcgactag atcgtaagcc tgggcgtgcc ggatagtgcg gtccagcgag ttgcgggtga
      961 tctggaggga ccggctcgag tagcgagatg tgagctggct caaagctgac ctgacctcgc
     1021 gtgcgctgag gtcccggagc ggacgggtgc cgatgatctc caataccggc tccagcaggc
     1081 cctcatacag cgcgcgggtc cgctcggatc ttccatccag cccctcccgg agccagtcct
     1141 ccaccgcatc gcggaccgtg tacccggccg acgatctgat cccggcgttc agctcctggt
     1201 ggagcgcctt gagtttgtcc cggacgtcct gcttcgtgcg accgtagacc ttccggcgga
     1261 tccgcttgcc ctcgggcgtg tggccgaccg agacggcccc cacgtaccgg ttcttggccg
     1321 ccgcgaagta gatcgagtcc tcgccgtgcc ctcggcgcct ggcgctggcc tccgccatgt
     1381 agggagccta acagtttggc tccccgtttg gctccccact gatccgcgaa ggcccactat
     1441 aggcccctga actgcgcccc gagcaggatt cgaacctgcg acctactgct taggaggcag
     1501 tcgctctatc cactgagcta tcggggctgg tgcgaccatc gccacgccgc gcacggccaa
     1561 ggctgaacca gcctaatcgt atgctgccgg tctcgcgccc ggtgcccctg cgcgagccta
     1621 gggtgggtgg caggctcggc gtctgccaag gacaggagca cgcgcggtgc aggtacgaga
     1681 tgtgatgacc gaggcgacgg tcaccgattc gacgacggac acgctccggt cggcggccga
     1741 gcgcatgtgg cgcgagcaga caggctcctt gctgatcctg gatggggaac ggctcgctgg
     1801 gatcatcacc gagcgggacc tgctgcgggc agtggcactc ggcgcggacc cggccactgc
     1861 aaccgtggat gaggccatga ccacggaggt attcacggtc ccgccggaca tgccactgct
     1921 ggacgcggcg cgcgagatgg ccacgcgctg gatccggcat ctgcccgtgg aggatgacgg
     1981 ccagctggtc ggcatggtca gcatgcggga cg
//
LOCUS       DASRPQ010000011         1250 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2509650, whole genome shotgun sequence.
ACCESSION   DASRPQ010000011 DASRPQ010000000
VERSION     DASRPQ010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2509650"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1250
                     /locus_tag="VFD73_00115"
     CDS             <1..>1250
                     /locus_tag="VFD73_00115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72434.1"
                     /translation="KRGDLIFLDTGIDVPTTPSRVSTPIRPAKESARVTYEPPAPAPP
                     APPSVEPDAEPETAPEVEPESEPATVPEGLLLNEPLTASANPMSDLIVDPLISDAQGA
                     DSSDEILGIERLGDPLAGGSDLSGSLDIQRGGESSSLDFESMTVEGIEGSSLSGLLPD
                     QPGPLDFSVDPTASSVDFPDDLIVSLPDTETGFNVDMPDAPESGSPPEVAEPPLVEDD
                     LSLVGSSDGDGDTLADLENRVLDDPENPDVHLALADKLLAMDETDRVAEELELALAGF
                     EDRQDWGRASEMADRLVKLMPDSIGHHQKRVELAYRTGDRGPLLEAYMGLGDALAKSG
                     ALDKAAAVYGRVLEHDPGNSPATAALARVGAAPKSPPAPDRAPKAEPAPPVRDSKPAP
                     SAPPSKPMSSASPAPTAPEPPSPP"
BASE COUNT          217 a          413 c          402 g          218 t
ORIGIN      
        1 ccaaacgcgg cgacctgatc ttcctggata ccgggatcga tgtcccgaca actccatccc
       61 gggtgtccac tcccatccgc cctgccaagg aatcggcacg agtcacgtat gagccgccgg
      121 ctccggcgcc gccagcgcca ccttcggtcg agcccgacgc agagcccgag acggcgccgg
      181 aggtcgagcc cgagtctgag cccgcgacag tgccggaagg gttgctgctg aacgagcccc
      241 tgaccgccag cgccaacccg atgtccgatc tgatcgtaga tcccctgatc tcggatgccc
      301 aaggcgccga cagctcagac gagattctgg gaatcgaacg tttgggcgat ccactggcgg
      361 gtgggagtga tctctccgga tctctggaca ttcagcgcgg tggcgaatcg tccagcctcg
      421 atttcgagtc catgacagtc gaagggatcg agggcagcag cttgagcggg ctgctgcccg
      481 atcaaccggg accgctggac ttttcggtgg acccgactgc gagctcggtg gatttccccg
      541 acgacctcat cgtgtcgctg cccgataccg agacggggtt caatgtcgac atgccggatg
      601 ctcctgaatc cggctcgcct ccggaggtcg ccgagcctcc actggtggag gatgatctct
      661 cgctggttgg ctcgagcgat ggcgacggcg acactctggc ggacctggaa aaccgggttc
      721 tcgatgatcc cgaaaatccc gacgtgcacc tggcgctggc cgataagctc ttggccatgg
      781 atgagactga tcgggtcgct gaggagctgg agctggcgtt agcggggttc gaagatcggc
      841 aggattgggg ccgcgcgtca gagatggctg atcgcctggt caagttgatg cccgacagta
      901 tcggccacca tcagaagcgg gtcgagctgg cctaccgcac cggcgatcgt ggtcctctcc
      961 tcgaagccta tatgggtctg ggcgacgcgc tggcgaaatc aggcgcgctg gataaggcgg
     1021 ccgcggtgta cggacgggtc ctcgagcacg atcccggcaa ctcgccggca acggcagcct
     1081 tggcccgagt gggtgcagca cccaagtctc ctccggcgcc tgatcgtgcc cccaaggcag
     1141 agccggcgcc tccagttcgg gactcgaagc ccgcaccgtc ggccccgcct tcgaagccaa
     1201 tgagttcggc ctcacctgcg cctacggctc ctgagccccc ctctcctcct
//
LOCUS       DASRPQ010000012         1114 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2195568, whole genome shotgun sequence.
ACCESSION   DASRPQ010000012 DASRPQ010000000
VERSION     DASRPQ010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2195568"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          203 a          346 c          365 g          200 t
ORIGIN      
        1 tccacctgct cggtcagctt ctcagggctg ctggccgcga ccagcgtccg cttgcccctg
       61 accgcgaccc acacgctttc caggggatca aacatgatgc cccaccgggg gaacctggcc
      121 cggagcttgc gcgtgtcgtc agccgcatgg gcgttgtcat ctggcatggc atccccctat
      181 ttgctgagag ccagcctgtt ctcccagcat aagcccgggg agcctggacc gctgggggac
      241 agccagattg cctcaagtga cgtcccgccg ccgacgcggg aggctggatc ctggccgccc
      301 ctgctggtgg tgcgtgcatc gtccgtcaag gcggacgtca ggctccagcg ggctgtcaga
      361 cgctgcggca ggctacggtg ggttggatac cgccctgccc gattcatccg ggtgaacttt
      421 gctggctgac tgtgtacatc catgtggatt acctgtgtaa aacgaagccg agcctgtgtg
      481 cgtagtgggg aatgctgagg atcgtgtggc cgggtcgcgg gcataacatg gccttcacct
      541 gggaggatgc gggttatgcc ctgtgcataa aaaagaaccg gaattgtcca tgcgccacgc
      601 cgcacagccc cataaataag ccgaacgttt atcgcaagta tatccagttg tgattcgggg
      661 ccgggaccgt cgataaatga agcccagaga cggtgagccc ggggcgcttt gacaacggga
      721 gggcaagccg caacagcggc acgcgtgcac cggggcgaac aggcgctcgc tgatgacagg
      781 tcacgatccc tgcacttgcc gatgacagcc cggcatgatc gtgtatgccg cgtaggcagc
      841 gccctatccc gcacatgcgg atgcgtagcc attagccggt ctctcatccg cgtgtgggcc
      901 tgtcccagag gtcacctggg cttatacggc gctcgccgct ggctcaatgg gaggtgcgac
      961 atgaaaatca agatccggcc acatgatcca ggcgtgctcg acgaggcgga ctggctccag
     1021 atggatggct ggctcgccaa gctccgggac gatggcaagg ccgggtcggc cggcgatgac
     1081 cacgtccagc ccgcgcacgg cagcggcgtc cgcc
//
LOCUS       DASRPQ010000013         2375 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1568581, whole genome shotgun sequence.
ACCESSION   DASRPQ010000013 DASRPQ010000000
VERSION     DASRPQ010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2375
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1568581"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..357)
                     /locus_tag="VFD73_00120"
     CDS             complement(<1..357)
                     /locus_tag="VFD73_00120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72435.1"
                     /translation="MAPDRDVQGVAGVEPNVHLERSAVPLHAFILALSTSGSAQIKDN
                     SFLLEEAYNQEPGVVQHINSFVRSGEGDWSYLFTQEWPLGSLQHQLSYSLLLQHSRGE
                     GTGFGDAVLNYRYQLIG"
     gene            complement(318..1676)
                     /locus_tag="VFD73_00125"
     CDS             complement(318..1676)
                     /locus_tag="VFD73_00125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HZI72436.1"
                     /translation="MSAASTRPVSDSGAWRYPRTLPSLPESYHSVQVPRGVSFWRKAL
                     AFAGPGYMVAVGYMDPGNWATDLAGGARFGYTLLSVVLLSNLMAILLQALALKLGIAT
                     GRDLAQACRDHYSRPVSFVLWVLCEIAIAACDLAEVIGSAIALNLLFGVPLVWGVCLT
                     ALDVLLILLLQHKGFRYLEALVITLVGTIGLCFAIELIMARPEIGQIVRGLVPTGQIV
                     SNPAMLYIAIGILGATVMPHNLYLHSSIVQTRKVLSDNASKREAIRFATLDSTLALLF
                     AFFINASILILAAAAFHDSGHQGVADIGDAYRLLSPLLGTGLASTLFAVALLASGQNS
                     TITGTLAGQIVMEGFLDIRLPAWLRRLITRLIAIVPAVVVTALYGEHGAGGLLILSQV
                     VLSLQLSFAVVPLVYFTSERRKMGEFVNGRAVTGAAWLVAGAIIGLNAWLLIATFREW
                     LA"
     gene            complement(1673..>2375)
                     /locus_tag="VFD73_00130"
     CDS             complement(1673..>2375)
                     /locus_tag="VFD73_00130"
                     /inference="COORDINATES: protein motif:HMM:NF014762.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HZI72437.1"
                     /translation="LNPSFPVSAAATESLTRSVEDYLKAIYQLSPEGRPASTSEIAHL
                     LALSPPSVTGMVKRLSEHGLLEHVPYRGVQLTGQGRRAALRMIRRHRLIEAYLVEFLG
                     YSWDLVHDEAERLEHAVSDTMVERMASALGHPEVDPHGDPIPSADGSIHEPACIPLSE
                     LPAGATAEIHRVSESQPDRLRYIASLGLRPGVTVKVLDRQPFDELVTVQVGAEQHVVG
                     PELGRVLQCLMLEAR"
BASE COUNT          528 a          721 c          750 g          376 t
ORIGIN      
        1 gccgatcagt tgatatctgt agttgagaac cgcgtcgccg aaaccggtcc cctcgccgcg
       61 gctatgctga agaagaagcg aataactcag ctggtgttgg agacttccga gcggccattc
      121 ctgggtaaag aggtacgacc aatcgccctc ccccgatcga acgaagctat tgatgtgctg
      181 aacaacgccc ggttcctggt tgtacgcctc ttccaggaga aagctgttgt ccttgatctg
      241 tgctgacccc gaggtcgaca gggcgagtat gaacgcgtgg agcgggaccg ccgagcgctc
      301 aaggtgcacg tttggctcta cgccagccac tccctgaacg tcgcgatcag gagccacgca
      361 ttcagtccaa tgatcgcgcc agcgacgagc cacgcagccc cggtcaccgc ccggccgttc
      421 acgaactctc ccatctttcg acgctcgctc gtgaagtaga ccaagggaac caccgcgaag
      481 gagagctgga ggctcagcac gacctgactc aggatgagaa ggccacccgc cccgtgctcg
      541 ccgtagagtg cggtcaccac cactgccgga acgatcgcaa tgagccgggt gatgagtcgc
      601 ctgagccagg cagggaggcg gatatcgagg aatccctcca tgacgatctg accggccaac
      661 gtcccggtga tggtcgaatt ttgccctgat gccagaagcg ccacagcaaa caaggtgctc
      721 gccaggccgg taccgaggag cggcgacagg agacggtatg catctccgat gtccgcgaca
      781 ccctggtgcc cggaatcatg gaatgcggca gcggccagga tgagaatcga ggcattgata
      841 aagaaggcga acagcagtgc cagggtagag tcgagcgtag caaagcggat cgcctcccgc
      901 ttggaagcgt tgtccgatag cactttccgg gtctgcacaa tcgaagaatg caggtaaaga
      961 ttgtgcggca tgaccgtggc acccaggatg ccgatggcga tgtagagcat ggcagggttg
     1021 ctgacgatct gaccagtggg caccagaccg cggacaatct gcccgatctc ggggcgcgcc
     1081 atgatcaact cgatggcaaa gcagagcccg atggttccta ccagagttat gaccagcgcc
     1141 tccaggtacc ggaaaccttt gtgctgcagc aggagaatga ggagcacgtc cagggcggtc
     1201 agacacacac cccacaccag cggaacgccg aaaagaagat tgagcgcgat cgcagaaccg
     1261 atgacttctg ccagatcgca ggcggcaatc gcaatttcgc agagcaccca gaggacaaag
     1321 ctgaccggac gggagtaatg atcccggcag gcctgggcga gatcccgacc ggtggcgatg
     1381 cccaacttga gggcgagcgc ctgaagcaga atggccatca ggttggacag cagaactacg
     1441 ctcagcaggg tatagccgaa ccgggcacct ccggcgaggt cggtggccca gtttcccggg
     1501 tccatgtacc cgaccgcgac catgtatccc gggccggcaa acgccagcgc cttgcgccaa
     1561 aaggagactc cccgagggac ctgaaccgag tggtatgact cgggaagaga gggcagggtg
     1621 cgagggtacc gccacgctcc agaatcggac accggacggg tagaggcagc gctcatcgag
     1681 cctccagcat gaggcactgc agcaccctgc caagctccgg acccactacg tgctgctcag
     1741 ctcctacctg caccgtgacc agctcatcaa agggctgccg atcgaggacc ttcaccgtaa
     1801 ccccaggacg caggccgagc gacgcgatgt atcgcaggcg atcgggctga ctctcggaga
     1861 cccgatggat ctctgccgtg gctcccgccg gcagttccga aagcggaatg caagcgggct
     1921 cgtgaatgga cccgtcggcg gatggaatcg ggtcgccgtg agggtcgacc tcaggatggc
     1981 ccagcgcact cgccatgcgc tctaccatcg tgtccgagac agcatgctcc agccgctcgg
     2041 cctcatcgtg gaccagatcc caggagtatc ccagaaattc aacgaggtaa gcttcgataa
     2101 gccgatgccg gcggatcatc cgaagcgcag cccggcggcc ctggccggtc aactggacgc
     2161 cccgataggg gacgtgctcc agcaacccat gctctgacag ccgctttacc atccccgtga
     2221 cggagggtgg cgacagcgcc agtagatggg cgatctcgct ggtggaggcg ggccgcccct
     2281 caggggaaag ctggtaaatg gctttgaggt agtcttcgac cgagcgggtc agtgattcgg
     2341 ttgcggcagc actcacaggg aagctcgggt ttagg
//
LOCUS       DASRPQ010000014         1162 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3449584, whole genome shotgun sequence.
ACCESSION   DASRPQ010000014 DASRPQ010000000
VERSION     DASRPQ010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3449584"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            18..>1162
                     /locus_tag="VFD73_00135"
     CDS             18..>1162
                     /locus_tag="VFD73_00135"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HZI72438.1"
                     /translation="MRTFRRFLVLAMRARWVTILVTLGLFGAALYGMRLVPQQFFPSS
                     DRPELLVDLQLPENASVYATKDVSVRLDKLLKSDPDVDHWSTYVGQGAVRFYLPLNVQ
                     LPNDFFGQAVVVTKGVQQRERVKARLEHALATEFPSVVGRVYPLELGPPVGWPLQYRV
                     SGPEPDQVRAIAFKVAEEVGSTPGAENINYNWMEPARTIRIRVDQDQARLLGLSSQQL
                     ALSLNAVVSGVTATQMRSGIYLVDVLVRASAEQRMSLSTIRTLQVPLPNGQTVPLSQI
                     AFVEYGQEYPIVWRRDRRPTVTVQADVVPGTQAATVVQALAPKIAALNASLPSGYHIN
                     VGGTVEESSKAQTSVAAVLPLMLILILTVLMIQLQSFNSLFLVLSVAP"
BASE COUNT          205 a          373 c          370 g          214 t
ORIGIN      
        1 aggagcccgg cccaatcatg cgcacgttcc gccgcttcct cgtgctggcg atgcgggcac
       61 gctgggtcac gatccttgtc acgctgggcc tgttcggggc agcgctgtat ggcatgcgct
      121 tggttccgca gcaatttttc ccgtcatcgg accgccccga gctgctcgtg gatctgcaat
      181 tgccagagaa cgcttcggtc tatgcaacaa aggatgtctc ggtccggctg gacaagctcc
      241 tgaaaagcga tccggatgtg gaccactgga gcacctatgt cggacagggc gccgtgcgct
      301 tctatctgcc tctcaacgtt cagctgccca atgacttttt cggccaggca gtggtcgtca
      361 ccaaaggtgt gcagcagcgg gaacgcgtga aggcgaggtt ggagcacgcg cttgcgaccg
      421 agttcccgag cgttgtcggg cgggtctatc cgctggagct cggcccgccg gtagggtggc
      481 cgctccaata ccgggtgagc ggaccggagc cggaccaggt gcgcgcgatc gcgttcaagg
      541 tcgccgagga ggtagggtcc acccccggtg cagagaacat caactacaac tggatggagc
      601 cggcgcgcac gatcaggatc cgggtcgacc aggaccaagc ccgcctcctt ggcctgagct
      661 cgcagcagct ggccctgtcc ctgaacgcgg tcgtatccgg cgtcacagcg acccagatgc
      721 gcagcgggat ctatctcgtc gatgtcctgg tccgggcctc cgccgagcag cgcatgtcac
      781 tgtcaacgat tcgcacgctg caagtgccgc tgccaaacgg gcagaccgtt cccttgagcc
      841 agatcgcctt tgtcgagtac ggccaggaat atccgatcgt ctggcgccgg gaccggcggc
      901 ccacagtgac cgtgcaggcc gacgtcgtgc ccggcacgca agccgccacc gtcgtccagg
      961 cgctggcgcc gaagattgca gcactaaatg ccagcctgcc gagcgggtac catatcaacg
     1021 tcggcgggac agttgaggag agcagcaagg cgcagacgtc ggtcgccgcc gttctgccat
     1081 tgatgcttat tctgatcctc acggtactga tgatccagct ccagagcttt aacagcctgt
     1141 tcctggtgct cagcgtggcc cc
//
LOCUS       DASRPQ010000015         3832 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2822726, whole genome shotgun sequence.
ACCESSION   DASRPQ010000015 DASRPQ010000000
VERSION     DASRPQ010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3832
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2822726"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..229
                     /locus_tag="VFD73_00140"
     CDS             <1..229
                     /locus_tag="VFD73_00140"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="flavin reductase"
                     /protein_id="HZI72439.1"
                     /translation="LARVRIRPGQAGSPILEDALAYFECALEGRTRAGDHELVLGRVM
                     NGQILDPKATPLTYAETGDMDGSSALYPGSF"
     gene            298..828
                     /locus_tag="VFD73_00145"
     CDS             298..828
                     /locus_tag="VFD73_00145"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI72440.1"
                     /translation="MSTVMITRPAQDESVGYYHRYIDQVTDDDIAGQLGGQLREVEKL
                     FENVTDRDASARYAPGKWSIKEILGHLSDVERIFGYRLLRIARGDTTPMAGFDENAYV
                     PAGQFDERPLPMLLAEFRAVRQSTAALIEGLPAEAWERRGVANNQSISARALAYVIVG
                     HVTHHFRVLQERYGLR"
     gene            complement(854..2440)
                     /locus_tag="VFD73_00150"
     CDS             complement(854..2440)
                     /locus_tag="VFD73_00150"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HZI72441.1"
                     /translation="MRTTRVWPALAALLLATPAAAIAQQPPPPEFDGYVKRVMQTFTV
                     PGLAVAVVKDGKVVLARGYGVRRMGAATPVDSLTRFGIASNTKLFTATAIALLVEEGK
                     LGWDTPVSTYLPGFAMSDPYVTHELTVRDLLVHRSGLGLGAGDLLWWPPSTYNRKEIA
                     RRIRYIPLSTSFRSAYAYDNVLYLVAGELIEAVSGQSWEDFVRSRILRKVGMTASDVR
                     HAGAAEAGNVAGTHAEVNDTVRPVAPFTSDNTNPAGGIMAGAADMAKWLLVQLDSGRV
                     SDGSRLFTPASAKQLWREVTPTPIADPPQGMPQLAHLRPTMAGYALGLGVRDYRGYIL
                     RQHTGGLPGYLSKVAMIADLRLGVAVLTNQESSAAFDAIVYRVLDYYIGAKSPDYSAL
                     FQQLVAKNRQTVQAAEQKAATSRDSTSGPSLPLAKYAGIYRDPWYGDVKISEEANGLV
                     IRFTHTPSLVGDLVHWQHDTFLARWRDRELRADAYATFWLNADGTVNQLRMIPASPSV
                     DFSFDFQDLVLRPATDSTRH"
     gene            complement(2451..2714)
                     /locus_tag="VFD73_00155"
     CDS             complement(2451..2714)
                     /locus_tag="VFD73_00155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72442.1"
                     /translation="MDLSALFDALTPVAGIGVIMLGLVKIVRYWSQASQARSTGGAQL
                     ESRLESVEQDLAALHQELTDTQERLDFAERLLAQSRESKRLPE"
     gene            2903..3406
                     /locus_tag="VFD73_00160"
     CDS             2903..3406
                     /locus_tag="VFD73_00160"
                     /inference="COORDINATES: protein motif:HMM:NF017758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HZI72443.1"
                     /translation="MGLLTKPIKTLNDLFVHTLQDVYYAEQKITKALPKMISKVSDQQ
                     LQSAFLTHLAETEHHIERLEQVFQMHGEPVKAVTCPAIDGIVDEAEEIMKDASDPEVL
                     DAAALASAQAVEHYEITRYGTLVAWARELGRNDCASVLQQNLDEEKATDQKLTQIAEA
                     RINRVAV"
     gene            3476..>3832
                     /locus_tag="VFD73_00165"
     CDS             3476..>3832
                     /locus_tag="VFD73_00165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72444.1"
                     /translation="MQRLPRSLLLFAPVLLGCATRAPGPVQSSSSGLAAAESLYADLR
                     DRRDRIDVTLASGRTAAADPDAASIQRYNELRRTVAVRLAAIDSSTLRNDDGRAFSVM
                     RQTLERDLDSLPLRAGS"
BASE COUNT          741 a         1207 c         1195 g          689 t
ORIGIN      
        1 gctggcgcga gtccgtatcc gtcccgggca ggcgggctct cccattctgg aagacgcgct
       61 ggcgtatttc gaatgcgcgc tggagggacg tactcgagca ggcgatcacg agctggtatt
      121 gggccgggtg atgaacgggc agattctcga tcctaaggcc accccgctga cctatgctga
      181 gaccggagac atggacggca gcagcgcgct ctaccccggc agtttctgac gccaagagat
      241 gagcggttac actttaggca gcaccggaca gcgacaaaaa gcgtgatgga ggcaagcatg
      301 agcaccgtaa tgattacccg ccccgcgcag gatgagtcgg taggctacta tcaccgctac
      361 atcgaccaag tcactgacga tgacattgct gggcaactcg gagggcagct gcgagaggtc
      421 gagaagctgt ttgagaacgt gaccgaccgc gatgcctcgg cccggtacgc gcccggcaaa
      481 tggagcatca aggagattct cggtcacctc agcgacgttg agcgaatttt cgggtatcgc
      541 ttgcttcgga ttgcacgggg agacaccacc cccatggcag gcttcgatga gaacgcctac
      601 gtgcctgccg ggcagttcga cgagcgaccg ttaccgatgc tgctggccga gttccgcgcg
      661 gtccggcaga gcaccgccgc cttgatcgag ggactaccgg ctgaggcttg ggaacggcgc
      721 ggggtggcca acaaccaatc aatcagcgcg agagcgctgg cctacgttat cgtcggccat
      781 gtcacccatc atttccgcgt tctccaggag cgctatggac tgaggtagct ccggccgcgg
      841 atcaggtact ccgctagtga cgggtagaat cggtggccgg cctcagtacc agatcctgaa
      901 agtcgaagct gaagtccacc gaaggcgagg cggggatcat gcggagttga ttgaccgtcc
      961 cgtcggcgtt gagccagaag gtggcatacg cgtcggctcg aagctcccga tcccgccagc
     1021 gcgcaagaaa cgtgtcgtgc tgccagtgaa ccaggtcgcc caccagcgac ggtgtgtggg
     1081 tgaaccggat gaccaatccg tttgcttcct ccgaaatctt tacatcaccg taccacgggt
     1141 cgcgatagat gccggcatac ttcgcgagcg gaagcgacgg gccggacgtc gagtcgcggc
     1201 tcgtggcagc cttctgctct gccgcctgga cggtctgccg gtttttcgcc accagttgct
     1261 ggaacagcgc tgagtagtcg ggagatttgg cgccgatgta gtaatccagc acgcggtaga
     1321 caatggcatc gaaggcggca ctcgactcct ggttggtcag cacagccacg ccgaggcgga
     1381 gatcggcaat catcgcgacc ttcgagaggt agcccggcaa cccgccggtg tgctgccgca
     1441 ggatgtaccc gcggtaatcc cgaacgccca ggcccagggc atagccggcc atcgtaggcc
     1501 tcaggtgcgc cagctgaggc atgccctgcg gcggatcggc gataggcgtc ggcgtcactt
     1561 cgcgccagag ctgctttgcg ctggcgggag taaagagccg acttccatct gagacccggc
     1621 ccgaatccag ctgaaccaga agccacttgg ccatgtcggc ggcacccgcc atgatgccgc
     1681 ccgctggatt ggtattgtcg ctggtgaacg gcgcgactgg ccgtacggtg tcattcactt
     1741 ccgcgtgagt gccggccacg ttgcccgcct cggctgcacc ggcatgccgc acgtcgctgg
     1801 cggtcattcc gactttgcgc aggatccggc tccggacgaa atcttcccac gattggccgg
     1861 agaccgcctc gatgagctcg cccgccacca gatagagcac gttgtcatag gcgtaggcgc
     1921 ttcggaatga ggtcgagagt gggatgtagc ggatccggcg ggcgatctct ttccggttgt
     1981 acgtggaggg cggccaccag agcaggtcac cggcgccgag accgaggccg cttcgatgca
     2041 ccagcaggtc acgcaccgtc agctcgtggg tcacgtaggg atcggacatg gcaaagccgg
     2101 gcagataggt gctgaccggc gtatcccagc caagctttcc ctcttccacc agcaacgcga
     2161 tcgcagttgc ggtaaacagc ttggtgttcg acgcaatgcc gaatcgggtc aggctatcga
     2221 ccggagttgc ggcgcccatc cggcggacgc catagcccct ggccagaacc accttgccgt
     2281 ccttgacgac cgccaccgcc agaccgggaa cggtaaaggt ctgcatcacc cgcttcacgt
     2341 acccatcgaa ttcgggcggc ggaggctgtt gggctatggc ggcagccggt gtagccagta
     2401 gaagcgctgc gagagcaggc cagactcgag tcgtcctcat cggttctcct ctactccggc
     2461 aggcgcttgg attcacggga ctgggccaga aggcgttccg cgaaatcgag ccgctcctgg
     2521 gtgtcggtca gctcctggtg cagagccgcc aggtcctgct ccaccgactc caaccttgac
     2581 tccaattgag ccccgccagt gctccgggcc tgagacgcct gggaccagta tcgcacgatc
     2641 ttcacgaggc cgagcatgat gacgccgatt cctgccaccg gcgtgagcgc gtcaaaaagg
     2701 gcgctgagat ccatagaatc gcctcgtcgt gtattgcagt tagactgcta ccagcagggc
     2761 cgacttaccg cccggcgcac tgcgcccatc cgtgatcctg atcacggtcg cgcgagcgca
     2821 atcgccccag actgtcagtc ccagttggcg aacatcttgt cgcagcattc aacgcggcga
     2881 tcacctttac cggagaaaca tcatgggtct gttgaccaag ccaatcaaga cactcaatga
     2941 cctctttgtc cataccttgc aggacgtcta ctacgccgaa cagaagatca ccaaggccct
     3001 tcccaagatg atctcgaagg tgtcggatca gcagctccag tccgcctttc tgacccacct
     3061 ggcagagacc gagcatcata tcgagcgcct ggagcaggtc ttccagatgc atggtgagcc
     3121 ggtcaaggca gtgacctgcc cggccatcga cgggatcgtg gatgaggccg aggagatcat
     3181 gaaggacgcg agcgaccccg aagttctgga cgccgccgcg ctggcttcgg cgcaggcagt
     3241 ggagcattac gagattaccc ggtacggcac cctcgtcgcc tgggctcgtg agctcggccg
     3301 gaacgactgc gccagcgttc tccagcagaa cctggacgag gagaaggcta ccgaccagaa
     3361 gctgacccag atcgccgagg ctcgcatcaa ccgggtggca gtctgaggtt gtcggcagta
     3421 tcagttgaac agttgcacca acagcgccgg cccaggccgg cgctatcttt ttcgagtgca
     3481 gcgactcccc cgcagcctgc ttctctttgc ccccgtcctg cttggctgtg cgacacgagc
     3541 acctggtccc gttcagagct cctcctcggg actggccgcc gctgagtcac tctacgccga
     3601 tcttcgggac cgccgcgatc gaatcgatgt caccctggct tccggccgaa ccgcggcggc
     3661 tgacccagac gctgcctcga ttcagcgcta caacgaactg aggcgaactg tggccgtccg
     3721 cctggcggca atcgattcca gtacgcttcg gaacgacgac ggcagagctt tctccgttat
     3781 gcggcaaacc ctggagcgtg atctggattc gcttccactt cgagcgggat cg
//
LOCUS       DASRPQ010000016         3118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3137083, whole genome shotgun sequence.
ACCESSION   DASRPQ010000016 DASRPQ010000000
VERSION     DASRPQ010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3118
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3137083"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..670)
                     /locus_tag="VFD73_00170"
     CDS             complement(<1..670)
                     /locus_tag="VFD73_00170"
                     /inference="COORDINATES: protein motif:HMM:NF013109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HZI72445.1"
                     /translation="MLVPKLVTTLRTYSRELFLADLIAGAIVGVVALPLAIAFAIASG
                     VTPERGLYTAIIAGALISALGGSRVQIGGPTGAFVVIVYGIVQTYGVAGLTVATIMGG
                     LLLVAFGLGRLGGAIKFIPFPVVIGFTSGIGLILTVQQLRDALGLKLASAPPDVIERI
                     GVYARHLETTNYYAVAVSLLTLLLLQFWPRVSHKVPAPFVALIVTTLAVQLLDLPVET
                     IGTRF"
     gene            815..1927
                     /locus_tag="VFD73_00175"
     CDS             815..1927
                     /locus_tag="VFD73_00175"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HZI72446.1"
                     /translation="MRIALVSEYYFPHLGGVTEHVHNLAVILNRTGHTAIVITSHMGP
                     GGDDIEPDAEWVHRVGTSRVIFSAGSFARLTTGRHLRSQIREILQRERIDLVHVHGGL
                     NPVLGLVAPEAAHDLGLPVVATFHSWFRSSALCRIFRRQLQQRLDRHAAAIAVSQPVV
                     DAHARYLTADWHIIPNGVDTGFFSPQHEPSSSSSGPELLFLGRLDPRNGLDTILAAMP
                     EVVRRRPDVHLTIAGDGPLRPFYERLAQRTADHVTFVGRVNGNRPLYYSKADLYLCPT
                     TKASFGVTLLEAMACGTPQIVSDITGFRELVGEGSEAVLIPKNDSEAWAETIVGLLED
                     TERRREMAAAGSAKAREYAWPRVVERIAGVYRQVLG"
     gene            1924..2619
                     /locus_tag="VFD73_00180"
     CDS             1924..2619
                     /locus_tag="VFD73_00180"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HZI72447.1"
                     /translation="MIAPVALGAGIAAAGLWGAYDPNSPVYGPVIGRGPKERVVYLTF
                     DDGPNPSVTEWILKTLRRAGVPATFFMLGSYVEEYPGTALAVARAGHEIGNHTYSHAK
                     LHRLSASRVAEEVDRAHQAIVHITGRVPCSFRAPHGYRGPFVSRAVGRYGYQVFGWTF
                     GVRDSDCPGVEHIRWRVRARLRPGSIILLHDGDGYDPKGDRWQTAAALGDIIRDVRAA
                     GYRFEPLSRLVPP"
     gene            2616..>3118
                     /locus_tag="VFD73_00185"
     CDS             2616..>3118
                     /locus_tag="VFD73_00185"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HZI72448.1"
                     /translation="MSRSSWASLFLAVVGVICAVHFGWSFPWSRTFSLLADCNWALLT
                     AAAVVNIVSLAAKGGAWYLLLRQSSPLRLVTGEAATFIGAAVNSVSVSISGDVVRSQI
                     AAGRDGVPFGNAVAAVIVSRVVEAAALMGIVGIAAFSLAPDHRARLAGAAVLFLVAGF
                     SAWWSRAP"
BASE COUNT          530 a          998 c          989 g          601 t
ORIGIN      
        1 cgaagcgggt tccgatggtt tccaccggca aatccaggag ctgcaccgcc agcgtcgtaa
       61 cgatgagggc cacgaatggg gccggcacct tgtggctgac tctaggccag aactgcaaaa
      121 gcaggagcgt cagaagcgag accgccacag catagtagtt ggtggtctcc aggtgtctgg
      181 catagacccc gatccgctcg atgacatcag gtggcgcgct cgcgagcttg aggccgagtg
      241 cgtcgcgcaa ctgctgcacc gtgaggatca gcccgatgcc ggaagtgaac ccaatcacca
      301 ccgggaacgg aatgaacttg attgcgcccc ccagccggcc cagtccgaaa gcgaccagca
      361 gcaatcctcc catgatggtt gcgacggtga ggccagccac cccgtaggtc tggacaatcc
      421 cgtagacgat cactacgaag gcacccgttg gtccaccgat ctggaccctc gacccaccca
      481 gggcggagat cagcgcgccg gcgatgatgg cagtgtagag cccgcgttca ggggtcaccc
      541 cgctcgcgat ggcgaatgcg atcgccaacg gcaacgccac aacccccacg atggccccgg
      601 caatgagatc agcgagaaac aactcccggc tatacgtccg gagcgtagtg actagtttag
      661 gaaccagcac ccggcctctg ggacagtttg actcacctcg ggccctcccc gtgggtcatt
      721 gtgtctccct tagggcgctg gcactcgcac gtcgcgcttc ccgggctggc cacattcttg
      781 cctttgcgcg cgctgacaaa caggagtccc ccacatgcgc attgctctcg tgagtgagta
      841 ctactttccc cacctcggcg gcgtcaccga gcacgttcac aatctcgctg tcatcctgaa
      901 ccgaactggc cacacagcca tcgtgatcac ctctcacatg ggcccgggtg gagacgacat
      961 agagccggat gccgagtggg tccaccgggt cgggaccagc cgggtaatct tcagcgccgg
     1021 gtccttcgcc cggctgacca ctgggcgaca cttgcggtcg caaatccggg agatcctcca
     1081 gcgggagcgc atcgatctgg ttcacgtgca tggtgggctc aacccggttc tgggcctggt
     1141 cgctccggag gcggctcatg atcttggctt gccggtggtc gccacctttc actcatggtt
     1201 tcgaagctct gccctctgcc ggatctttcg ccggcaatta cagcaacggc tggatcggca
     1261 tgccgccgcg attgccgtga gccagcccgt ggtcgatgct cacgcccgct atctgaccgc
     1321 ggactggcac atcattccta acggcgtaga caccgggttc ttcagcccgc agcacgagcc
     1381 ttcctcgtcc agctccggtc ccgagctgct gttcctgggt cggttggacc cccgcaatgg
     1441 cctcgatacc atccttgccg ccatgccgga agtggtgcgc cggcgccccg atgtgcattt
     1501 gaccatcgcc ggtgatggtc ctctccgtcc gttttatgaa cggctcgctc agcgcaccgc
     1561 cgaccatgtc accttcgtgg gccgggtcaa tggtaatcga ccgctgtact actccaaggc
     1621 ggacttgtat ctctgcccca ccactaaggc gtcgttcggg gtgacgctgc tcgaagcaat
     1681 ggcctgcggg accccccaga ttgtctccga catcaccggc ttccgggagc tggtgggtga
     1741 gggtagcgag gcggttctga ttccgaaaaa cgattccgag gcgtgggcgg agacaatcgt
     1801 aggccttctg gaggataccg aacgccgcag agagatggcc gccgcgggat cggccaaggc
     1861 tcgagagtac gcctggcccc gggtggtcga acggatcgcc ggcgtgtacc gccaagtact
     1921 gggatgatcg ctccagtcgc gctcggggcc ggcattgcag ctgcaggctt gtggggagcg
     1981 tatgatccga acagtccggt ctacggtccc gttatcggac gcggcccaaa agaacgggtc
     2041 gtgtatctga cctttgacga tggtccgaac ccctcggtaa cggagtggat cctgaagacg
     2101 cttcgtcggg caggcgtgcc tgccaccttt ttcatgctgg gcagctacgt cgaggagtat
     2161 cccgggaccg cacttgccgt cgcacgggca ggacacgaga tcggcaatca tacctattct
     2221 catgccaaac ttcatcggct tagcgcgtcg cgagtggccg aggaggtcga ccgcgcacac
     2281 caggcgatcg ttcatattac cggacgggtg ccttgcagtt ttcgggcgcc ccacggctat
     2341 cgcggcccat tcgtgagccg cgctgtcggg cgatacgggt atcaggtgtt cggctggaca
     2401 ttcggtgtcc gcgattccga ctgccccggc gtagaacaca ttcgctggcg ggtccgggcg
     2461 cgactccggc ccggctcgat catccttctt catgacggcg acggctacga cccgaagggg
     2521 gatcgctggc agacagcggc ggcgctgggc gacatcatcc gggatgtgcg tgccgccggt
     2581 taccgcttcg aaccactttc gcgcctggtt cccccatgag cagaagcagc tgggcgagtc
     2641 tcttcctggc ggtggtcggt gtcatctgtg ccgtccattt cggatggagt ttcccgtggt
     2701 cgcgtacgtt cagcttgctc gcggactgca actgggcgct gttgactgcc gccgcggtgg
     2761 taaacatcgt ctcgttggct gccaagggcg gtgcgtggta tctgctgctg cggcagagct
     2821 cccccctccg gctggtgacc ggcgaggcag ccaccttcat cggcgcagcg gtcaactcgg
     2881 taagcgtctc gatcagcgga gacgtggtgc gatcgcagat cgccgctgga cgcgacggcg
     2941 tgcccttcgg caacgcggtg gcggctgtca tcgtgagccg ggtggttgag gcggccgcgt
     3001 tgatgggaat cgtgggaatc gccgcatttt cattggcccc agatcatagg gcacggctcg
     3061 cgggcgcggc cgtgctcttc ctggttgccg gcttttcagc ctggtggagt cgcgctcc
//
LOCUS       DASRPQ010000017         1396 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1425, whole genome shotgun sequence.
ACCESSION   DASRPQ010000017 DASRPQ010000000
VERSION     DASRPQ010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1396
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1425"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            22..>1396
                     /locus_tag="VFD73_00190"
     CDS             22..>1396
                     /locus_tag="VFD73_00190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72449.1"
                     /translation="MLLLAILPGAEPSNAASGDRYFPETGFTVPAIFANYWDTHGGLP
                     IFGYPITAAQMENGYLTQYFERNRFEYHPEHAGTQYEVLLGLLGDTLTVGRDFPRADP
                     FSDNPTHRYFTATGHDLQGSFLQYWEENGGLAQFGYPISNELQETSATDGKTYTVQYF
                     ERNRFEYHPENAGTPYDVLMGLLGRDYLTHLGPPSSPPASGPFPGWTPNPPAGYPPAP
                     SGPFLSGPHVGFGITVHMYYQNHKRVLDAVQDIGFNWIKQQVQWKDIEGSPGAYAWAE
                     LDSIVADTAARGLKLMISVVKAPAWANGGGNGFPTDPAYLGNFMHAMAAHYGGWVQAY
                     EIWNEQNLFSESGDLNPARYAELLKAGYLGVKAGNPQAVVVAGALTPTGIYNPAVAME
                     DTWYLDQLYQWHNGELRNYYDVLGSHPYGYNNPPDTMWPDNPSKAGAFTNHGQFYYRR
                     IEQQRQVM"
BASE COUNT          280 a          448 c          414 g          254 t
ORIGIN      
        1 cgtctgctcc ttccggttgt catgttgctg cttgccatct taccgggggc tgaaccgagt
       61 aatgccgcat cgggtgatcg ctacttccct gagaccggct tcacggtacc ggcgatcttc
      121 gccaattact gggatacgca cgggggcttg cctatcttcg gctatccgat cacagcggca
      181 cagatggaga acggctacct cacccaatac ttcgagcgca accgctttga gtatcatccc
      241 gaacacgccg gtacgcaata cgaggtgctc ctgggcttgc tgggcgacac gctgactgtg
      301 ggccgggatt ttcccagggc cgaccccttc tcggataacc ccacgcaccg ctatttcacc
      361 gccacggggc acgatctgca gggttccttt ctgcaatact gggaggaaaa cggcgggctg
      421 gcgcagttcg gctatccgat ctccaacgag ctacaggaaa ccagcgcgac cgacggcaag
      481 acctacaccg tgcagtattt cgagcgcaac cgcttcgagt atcacccgga aaatgccggg
      541 actccctatg atgtgctgat gggcctgctg ggccgggact acctgacaca cctcggcccg
      601 cccagttcgc cgcccgcctc cggccccttc cccggctgga cgccgaatcc gcccgccggg
      661 tatcctccgg cgccgtcggg gcctttcctc agcggcccgc atgtaggctt cgggatcacc
      721 gtgcatatgt attaccagaa ccacaagcgg gtactcgatg ccgtgcagga tatcgggttc
      781 aattggatca agcagcaggt gcaatggaag gacatcgaag gctcacccgg cgcgtatgcc
      841 tgggcagaac tggacagcat cgtcgccgat acggcggcgc gcgggctgaa gctgatgatc
      901 agcgtggtga aagcaccggc ctgggccaat ggcggcggga acggcttccc gaccgatcca
      961 gcgtatctgg gtaacttcat gcacgccatg gccgcgcact acggtggctg ggtgcaggcc
     1021 tatgaaatct ggaacgagca aaacctgttc agcgagagcg gggatttgaa cccggcccgc
     1081 tacgccgaac tcctgaaggc gggctacctg ggcgtcaaag cgggcaaccc gcaggcggtg
     1141 gtggtcgcgg gcgcgctcac gcccacgggg atctacaacc ccgctgtggc gatggaagac
     1201 acgtggtatc tcgaccagct ttatcagtgg cacaacggcg agctacgcaa ctattacgac
     1261 gtgctagggt cgcaccccta cggctacaac aacccccctg atacgatgtg gcccgataat
     1321 cccagcaaag ccggcgcttt caccaaccat gggcagttct actaccggcg catcgaacag
     1381 caacgccagg ttatgg
//
LOCUS       DASRPQ010000018         1263 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4076470, whole genome shotgun sequence.
ACCESSION   DASRPQ010000018 DASRPQ010000000
VERSION     DASRPQ010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4076470"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..131)
                     /locus_tag="VFD73_00195"
     CDS             complement(<1..131)
                     /locus_tag="VFD73_00195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016283109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HZI72450.1"
                     /translation="MKGIVLAGGSGSRLYPLTKITNKHLLPIYDKPMIYYPIQTLVDA
                     "
     gene            184..513
                     /locus_tag="VFD73_00200"
     CDS             184..513
                     /locus_tag="VFD73_00200"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZI72451.1"
                     /translation="MPEDQLNPTISRQMIHGETMTIARIHLRKGAVVPLHQHPNEQIS
                     MVEHGRLRFVIAGQEQIVQGGDMVAIPPNAPHLVEALEDSLATDLFSPIREDWIRGDD
                     AYLRGQK"
     gene            complement(550..>1263)
                     /locus_tag="VFD73_00205"
     CDS             complement(550..>1263)
                     /locus_tag="VFD73_00205"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HZI72452.1"
                     /translation="KAVQDKAKEVVSLVAPDLAPYIPKMAEQKQQMGGGGGGGDRSPT
                     PASKGRLPKPSMKQFTPPMAVVNNPNPKLVMEPTIIAPPDTPLPNVNMPVWGDPLAKM
                     GPPSNGPGSGGGIGSGSGGGVGSGKGGGFGPGEGGGVGGGVFRVGGGVSAPVPLYKPD
                     PEYSEEARKAKYSGTVVLSIIVDSTGKPRDIKVLRSLGLGLDEKAIEAVTKWKFRPGY
                     KNGQPVAVQASIEVNFRLL"
BASE COUNT          243 a          401 c          362 g          257 t
ORIGIN      
        1 gcatccacca gtgtctggat cgggtagtag atcatcggct tatcgtagat cggcagcaga
       61 tgcttgttgg tgatcttcgt cagtgggtac agtctgctcc cgctgccgcc ggccaggacg
      121 atgcctttca tgatccttaa tgatagaata ccggtcgccg tgaagctata tacgtgggga
      181 gaggtgccgg aagatcagct gaaccccacg atatcccgcc agatgatcca tggggagacc
      241 atgaccatcg cccgcatcca cctgcggaaa ggcgctgtcg tgccgctgca tcagcacccc
      301 aacgagcaga tcagcatggt tgagcacggc aggctgaggt tcgtgatcgc gggccaggaa
      361 cagattgttc agggcggcga catggtcgca ataccgccca acgcgccgca tcttgtggag
      421 gcgctcgaag actcgctggc caccgacctg ttctccccca ttcgcgaaga ctggattcgc
      481 ggcgatgacg cctatctccg cgggcaaaaa taacggggaa aatcggtagg gaagcgggta
      541 gtccagcgtt tacagcagcc ggaaattcac ttcgatggag gcctgcaccg ccaccggctg
      601 gccattcttg tagcccgggc ggaacttcca tttcgttacg gcctcgatgg ctttctcgtc
      661 cagaccaaga cccaggctgc gtagcacctt gatatcacgg ggtttaccgg tggaatccac
      721 gatgatgctc agcactaccg tgcctgaata cttggctttc cgggcttctt cggaatactc
      781 cggatcgggt ttgtaaagcg gtactggggc cgaaacgccg ccgcccactc tgaacacacc
      841 gccacctacc cctccgccct cacccggacc aaacccacca cctttacccg agcctacgcc
      901 gccgcccgaa ccgcttccaa tacccccgcc ggatccaggc ccattcgagg gcggacccat
      961 tttggccagc ggatcccccc acaccggcat gttcacattc gggagcggcg tgtccggcgg
     1021 ggcgatgatc gtcggctcca tcactagctt gggattgggg ttattcacaa ccgccatggg
     1081 aggtgtgaac tgcttcatag agggtttggg caaacggcct ttactcgcgg gagtggggga
     1141 ccggtcgccg cctccgcctc ctccgcccat ctgctgcttc tgctcggcca ttttgggaat
     1201 gtacggggcc aggtctggcg ccacgagtga aaccacttcc ttggccttgt cctgcaccgc
     1261 ttt
//
LOCUS       DASRPQ010000019         1144 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1569024, whole genome shotgun sequence.
ACCESSION   DASRPQ010000019 DASRPQ010000000
VERSION     DASRPQ010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1569024"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /locus_tag="VFD73_00210"
     CDS             complement(<1..228)
                     /locus_tag="VFD73_00210"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase family
                     protein"
                     /protein_id="HZI72453.1"
                     /translation="MTNNATEPTKPDGPEVAIVVRYQAMVGKGDEVAALLARHTAATR
                     AEPGNLDFVALRGTEDPDSFVLYERYESTDAF"
     gene            323..>1144
                     /locus_tag="VFD73_00215"
     CDS             323..>1144
                     /locus_tag="VFD73_00215"
                     /inference="COORDINATES: protein motif:HMM:NF040570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI72454.1"
                     /translation="MSRYRLVPSPAQEGALRDHCAHARFVWNLAVEQHSHWRRSRASA
                     PGYLEQCRQLTAVREEHPWLAAGSQMVQQQALRDFAQAMANFFAGTHRRPTWRKAGRN
                     DGFRVVAVKPRHVRRLSRKIGEVWIPKAGWVRFRWSRVVPAGVKSYRVTCDRAGRWHI
                     AFAVIPQPILAPGNDLAVGIDRGVVVSVALSTGELLHTPGLTAKERKRLHHLERRLAR
                     ADRRSNRRNRLRLAIARMRARETDRRKDWAEKASTDIARRFDLIRVEDLQIGKMTR"
BASE COUNT          183 a          356 c          391 g          214 t
ORIGIN      
        1 gaacgcgtcg gtgctctcgt accgctcgta cagcacgaac gagtccgggt cctccgtccc
       61 gcgcagcgcc acgaagtcca ggttgcccgg ctcggcccgg gtggccgcgg tgtgccgggc
      121 cagcagcgcc gcgacctcgt ctcccttgcc caccatcgcc tggtagcgca ccacaatggc
      181 gacctcgggg ccgtcaggct tggtcggctc ggttgcgttg ttagtcatag gtatcgcggg
      241 ccacaggctc tgccttcagg ccgagctggg aacaccgctc tctcctctct gaaatgtcag
      301 aggtgttcgc tagtgtgttc gtatgtcccg ataccggctg gtcccctcgc ctgctcagga
      361 aggagcgctg cgggaccact gcgcacatgc ccggttcgtg tggaacctgg ctgtggagca
      421 gcattcgcac tggcgccgga gccgggcgag tgcgccaggt taccttgagc agtgccgtca
      481 gctcaccgcc gtacgggaag agcatccttg gctggccgca ggctcccaga tggtgcaaca
      541 gcaggcgctg cgggacttcg cccaggccat ggcgaatttc ttcgccggta cccatcgcag
      601 gccgacatgg cggaaagctg gccggaacga tggattccgg gtcgtcgccg tgaagcctcg
      661 gcatgtgcgt cggctcagcc ggaagattgg agaggtttgg ataccgaagg ccggatgggt
      721 gcgtttccgt tggtcccgtg tcgtgccggc tggcgtgaag tcttaccgcg tgacgtgtga
      781 ccgggccggg cgctggcata tcgccttcgc cgtaattccc cagccgattc ttgcgccggg
      841 taacgacctg gccgtaggca ttgaccgggg cgtcgtggtg tctgtggcct tgtcgactgg
      901 cgagttgctg cacacacctg gcctgaccgc gaaggagcgt aagaggcttc accacctgga
      961 acgtaggctc gcccgcgctg accggagatc gaaccgtcgt aacagattgc ggctggccat
     1021 cgcccggatg cgcgctcgcg agacggacag gcggaaggac tgggccgaga aggcgagcac
     1081 cgatattgcg cgcagattcg acctgattag ggtcgaggat ctccagatcg gtaagatgac
     1141 gcgc
//
LOCUS       DASRPQ010000020         4483 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_941974, whole genome shotgun sequence.
ACCESSION   DASRPQ010000020 DASRPQ010000000
VERSION     DASRPQ010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4483
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_941974"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..218
                     /locus_tag="VFD73_00220"
     CDS             <1..218
                     /locus_tag="VFD73_00220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72455.1"
                     /translation="LLPPAFAMRVEWSLEELAGYVRTWSATKRYLETAGNDPVNPLEI
                     QMRPLWGDLQSKKTVSWPLSLRVGRKD"
     gene            368..736
                     /locus_tag="VFD73_00225"
     CDS             368..736
                     /locus_tag="VFD73_00225"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI72456.1"
                     /translation="MDDESSVRRFAARVLERNGFAVLEATDGLHALEMLRDQSQSIDA
                     VVSDIVMPRMNGVELMSALAASHPELPVILMSGYATAALTEMGIASPCSILPKPFPAE
                     RLLAEVRRCITQRNGGSSAA"
     gene            1074..3272
                     /locus_tag="VFD73_00230"
     CDS             1074..3272
                     /locus_tag="VFD73_00230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72457.1"
                     /translation="MSLTARIKFAALLLLPILGCDGGPSSPSAGGSLRVTILGLPSGA
                     AATVSVSGPGGFAQSVTGTQTLSQLAPGTYTVTANDVTSGTAQYSPSPPSQTVAISST
                     QASATVVYSTSSGSLAVNISGIGTSNAASVTVSGPSGYSHLVTASTTLKGLTPGDYAV
                     NASNPATIGCASTTPSPTNQTVTVVAKSTAVANVSYDPTPAGSTVNLCIGAMYLIQSA
                     QNLSGSVPLVQNRPAYLRVFAIADQANTLGPTVNVRLRFFLGGVLQTAQTQTITTSLT
                     SVPTAPDESSLNNSWNYLVPASLIQPDLSIEATVDPSNLVAESNDSDNVLIFTPPDVR
                     AVPALNVTFVPILQTSTNKQGGVTDVNKSAFLDVARSMHPLQGVNLQVRSTPISTSTT
                     LQSDGTGWQTVLDQVDAAAVVAGQYYYGVAKVSYTTGVAGIAYVSTSLNPARSALGWD
                     DPGTRGIVLAHELAHNWGRMHAPCGGPANLDANFPDPAGLTDSYGLDLSTNAPTLKPP
                     TSSDIMGYCNSKWVSEYTYRGVFDYLAPASPLSMGASASSSQPGLLVWGHSGSDGLVL
                     EPAFQVTTRPRLPAGHGPYTLELRSDDGSVLYAQSFAMNLVADLPGGHQSFAFAIPIS
                     AAQADHLASIRLTGEGRTAVLSTAGQSTAAPPPGLRNSPEVHRVLGGRALVRWDSGAH
                     AMAMVRDPDTGEVLAFAREGEVEVVTGKPHLDLLLSDGVKTRRQRLQVQQ"
     gene            3269..3772
                     /locus_tag="VFD73_00235"
     CDS             3269..3772
                     /locus_tag="VFD73_00235"
                     /inference="COORDINATES: protein motif:HMM:NF040422.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6438 domain-containing protein"
                     /protein_id="HZI72458.1"
                     /translation="MKGALAALLFLSAACAPRKSVAPPAERKAGESRSDDPALTLERT
                     PCFGRCPVYRLSISSNGLVSYHGVANVRQLGDASGQIPAERVAHLVQELEEAGYFLFA
                     SRYTPAESTCGRYATDLPTAITSVSLEGRRKRIEHDQGCGAAPGALRVLEHRIDEVAQ
                     SSRWTGH"
     gene            complement(3774..>4483)
                     /locus_tag="VFD73_00240"
     CDS             complement(3774..>4483)
                     /locus_tag="VFD73_00240"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI72459.1"
                     /translation="LHTDIHGTFHLFGTDRFGRDVWARLAYGARVSLGVGVLAVLLSL
                     IIGTAVGAAAGFWQGGLGVVLLGITDFALALPRVVLLLLLASLWQPSATLVIIVLGVT
                     GWMTIARLVHGEVRALAARPFVESAIALGVRAPRVLVRHILPNALTPVIVASALGIGN
                     AIMLEAGLSFLGLGVQPPTPSWGNLIASGRDTLVNAPWVATAPGVALVLVVVAATLLG
                     DALRDRLDPAQRQGNRV"
BASE COUNT          858 a         1442 c         1381 g          802 t
ORIGIN      
        1 agctgctgcc gccggcgttc gccatgcgcg tcgaatggag cctagaggaa ttggcgggct
       61 acgtccgcac ctggtcggcc acgaaacgat acctggaaac agcgggcaac gatcctgtaa
      121 atccgttgga gattcagatg aggccactct ggggagatct ccagagcaag aagacggtct
      181 cctggccgtt gagcctgcgg gtgggccgga aagactagta cggcagaagt tcaagaaagg
      241 ggtggtggga acctgggcca agcattagat tctggcgccc tatcaaccca aatcaggcat
      301 gaagacaatc gaggagttgc cgtcggcctc aacggcacac gatggcagca gagcttctgt
      361 actggtagtg gacgacgaaa gttcagtgcg gcgctttgcg gcccgagttc tggagcgcaa
      421 tggcttcgct gtgctggagg ccaccgacgg cttgcacgca ctggagatgc tgcgcgatca
      481 aagccagtcg atcgatgccg tggtctccga catcgtcatg ccgcggatga acggcgtcga
      541 gttgatgagt gcgttggccg cctcccaccc ggagcttccg gtcatcttga tgtcgggcta
      601 tgccacggcg gcattaaccg aaatgggcat cgcgtcgccc tgcagcatcc tgcccaagcc
      661 gtttccggcc gagcgtctgt tggccgaggt ccgccgctgt atcacgcaac gcaacggagg
      721 gtcaagcgcc gcctgacgct ctgacccggt agtgccatcc gctgtcccgc acgtcttcct
      781 cacacctcac aaatctgctg ttgccgctgg cgcgggtatt gccaactcca ctccggtgga
      841 aatgagcccg ctccaggttg acactgattt gaacccgcgg tgcttcccta ggagtgggta
      901 gtctccattg ttgtcaatgg taagttgctg ccactacgct agttagtcct ggcgcccaga
      961 atccgctgca ccccgtggcg gtggtgcaaa cccggatcga tgcaaggcgt gctggtgcat
     1021 tacgcaagag cccatccgtc aacgaaagcg atctcgcgct cctgagggct tcgatgagtc
     1081 tcaccgccag aatcaagttc gccgcgttgc tgctgctccc aatccttggc tgcgatggag
     1141 ggcccagcag cccgtcggct ggtggcagct tgagagtcac gattctgggt ttgccctcgg
     1201 gagcagcggc aacggtttca gtcagcggtc ccggcgggtt tgcccagtct gtgaccggca
     1261 cgcagaccct cagtcagctt gctcccggta cgtacaccgt aaccgctaac gatgtgacca
     1321 gcggtactgc tcagtattcc ccgagcccgc ccagtcagac ggtagcgatc agtagtaccc
     1381 aggccagcgc cactgtggtt tactcgacga gctcaggaag tctggccgtc aacatcagcg
     1441 gcatcggcac gagcaacgct gcttcggtca cggtgtcggg tccgtcgggc tacagccatc
     1501 ttgtgacagc tagcaccacg ctgaaaggtc tcacgccggg cgattacgcg gtgaacgcct
     1561 cgaacccggc caccatcggc tgtgccagca ccactcccag tcctaccaat caaaccgtca
     1621 cggtcgtggc aaagtcgacc gcagtggcca acgtcagcta tgatcccacc cccgccggta
     1681 gcacggtgaa cctgtgtatc ggcgcgatgt acttgatcca gagcgcgcag aacctctcgg
     1741 gcagcgttcc gctggtccaa aaccgtccgg cctatctgcg ggtgttcgcc attgcggacc
     1801 aggcaaacac attaggacca acggtgaacg tgaggctcag gttcttcctg ggaggggtgc
     1861 tccagacggc gcagacccaa acgatcacca cgagcttgac ctcggtgccg acggcgccgg
     1921 atgaaagctc attgaacaac tcctggaact acctcgtgcc tgcctcgctc attcagccgg
     1981 atctcagcat cgaggcaaca gtcgacccgt ccaatctggt cgcggagagc aacgacagcg
     2041 ataatgtcct gatctttact cccccggatg tacgggcggt gccggcactg aacgtgacgt
     2101 tcgtgcctat cctccagacc agcaccaaca aacagggcgg cgtcaccgac gtaaacaaaa
     2161 gcgcttttct ggatgttgcc cgaagcatgc acccgctcca gggggtgaat ctccaggttc
     2221 ggtccactcc catctccacc agcacgacgc tgcagtccga cggcaccggc tggcagacgg
     2281 ttctggatca ggtggatgct gccgcagtgg tggcggggca atactactat ggagtggcaa
     2341 aggtttcgta cacgaccggc gtggccggca ttgcctacgt gagtacatcc ttgaatcccg
     2401 cgcgttcagc tctgggatgg gacgacccag ggacgagggg tatcgtcctg gcgcacgagc
     2461 tggcccataa ttggggacgc atgcacgccc cctgcggcgg cccggcaaac ctcgacgcca
     2521 actttcctga tcccgccggc ctcacggaca gctatggtct cgatctctcg accaacgcac
     2581 ctacgctcaa gccacccacg tccagtgaca tcatgggcta ctgtaactcg aaatgggtga
     2641 gtgaatacac ctaccgaggc gtgttcgact atctcgcgcc agcgagcccg ctgagcatgg
     2701 gcgcgagcgc gtcgagctcg cagccgggac tcttagtgtg ggggcattcc ggaagtgacg
     2761 ggttggtact ggagccggca ttccaggtga ctacccgccc tcggctcccg gccggacatg
     2821 gtccgtatac cttggagctg cggtccgatg acgggtcggt gctatacgct cagtcctttg
     2881 ctatgaacct ggtggcagac cttcccggtg gccatcagag ctttgccttt gccattccca
     2941 tctcagccgc acaggccgat cacctcgcca gtatccgttt gactggagaa ggcagaacgg
     3001 cggtgctgtc gaccgcaggc cagtccaccg cagcgccacc gccgggattg agaaattcgc
     3061 cggaggttca ccgggtgctc gggggacggg ccttggtcag gtgggacagt ggagcccatg
     3121 caatggcgat ggtgcgggat cccgataccg gcgaggtgct ggcgtttgct cgcgaagggg
     3181 aggtcgaggt cgttaccggc aagccgcact tggacctgtt gctctctgat ggagtaaaga
     3241 ctcggcggca gcggcttcag gtacagcaat gaagggtgcg ctggcggcac tcctcttctt
     3301 gagtgccgcg tgtgcccctc ggaagagcgt ggcgcctccg gcggagcgga aggcaggcga
     3361 gagccggagc gacgaccctg ctcttacgtt ggagcgtacc ccgtgcttcg gccgctgccc
     3421 agtgtatcgt ctctccatct cctctaacgg gctggtctcc tatcatggcg tggccaacgt
     3481 gaggcagctc ggcgatgcct ccggccagat tcccgccgag cgagtggctc acctggtcca
     3541 ggagctggaa gaggccggat attttctctt cgcttcccgc tatactccgg ccgaatccac
     3601 ctgcggccgc tacgccaccg atctccccac tgcaataacg tctgtgtctc tcgaaggccg
     3661 tcgcaagcgg atcgagcacg atcaggggtg cggagcggcc cccggcgctc tccgcgttct
     3721 cgagcacaga atagacgagg tggcccagtc ttcgcgctgg accggccact gagtcatacg
     3781 cggttcccct gtcgctgagc cggatccagc cgatctcgca gcgcgtctcc cagcaacgtc
     3841 gccgctacca caacaagcac cagcgccacg cctggcgcgg tcgccaccca gggcgcattg
     3901 accagggtat cccgaccgga cgcaatgaga tttccccacg atggtgttgg cggctgtacc
     3961 cctaggccaa ggaacgaaag ccccgcctcg agcatgatgg cgttcccgat gccgagcgcg
     4021 gaggccacga tcaccggggt gagcgcgttg ggcaggatgt ggcgaaccag cacccgcggt
     4081 gctcgcaccc ccagggcgat cgcgctctcc acaaacggtc gcgccgccag cgcgcgaacc
     4141 tcaccatgca ccagccgcgc aatcgtcatc cacccggtta cgcccaggac gatgatcacc
     4201 agcgtcgcgc tcggctgcca caacgaggcg agcagcagga gaaggaccac ccgggggagg
     4261 gccagggcaa aatcggtgat ccccaggagc acgactccga gaccgccttg ccagaatccc
     4321 gcggcggcac cgaccgcagt tccgatgatc agcgagagca agaccgcgag cacgcccacc
     4381 cccagcgata cgcgcgcgcc gtaggcgagg cgggcccaca cgtcccggcc aaagcggtcg
     4441 gtcccgaaaa gatggaaggt cccgtggatg tcggtgtgca acg
//
LOCUS       DASRPQ010000021         1248 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2510792, whole genome shotgun sequence.
ACCESSION   DASRPQ010000021 DASRPQ010000000
VERSION     DASRPQ010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1248
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2510792"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..213
                     /locus_tag="VFD73_00245"
     CDS             <1..213
                     /locus_tag="VFD73_00245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72460.1"
                     /translation="PARSARAAAVSASLRTARGASIEVREGADGHYLCPPRGGHLPWR
                     RCGLWHGISLSVMVFSLPLGAEARLS"
     gene            complement(371..>1248)
                     /locus_tag="VFD73_00250"
     CDS             complement(371..>1248)
                     /locus_tag="VFD73_00250"
                     /inference="COORDINATES: protein motif:HMM:NF037725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptide ligase PGM1-related protein"
                     /protein_id="HZI72461.1"
                     /translation="ALVKLNEGVSGEGNALVDLRNLTVPGSPGEKEETARRVQEMAFE
                     LPGTPFSSYAAKLAERGGIVEERITGLELRSPSVQLRVTPFGEVELLSTHDQMLGGPS
                     GQSYLGCTFPADFEYARMISADAQRIGERLAHEGVLGRFAIDFVVVRSGDGSWTTYAI
                     ELNLRKGGTTHPFLTLQFLTDGRYDPATALFLTPNNREKHLVATDHLESPMLRGLAVD
                     DLFDIVARHGLHFDPARQQGVVFHMISCLTELGRVGLTAVGDTPASAKAMYHKAERIL
                     LDEARASLAERPLLG"
BASE COUNT          223 a          391 c          385 g          249 t
ORIGIN      
        1 ccagcgcgtt cagcccgggc ggcggcggtg tccgccagtc tacggaccgc ccgaggagct
       61 tcgattgaag tccgcgaggg agcggatgga cattatctct gcccaccgcg aggtgggcac
      121 ctaccgtggc gccgctgtgg cctgtggcac ggaatctcgc tgtcggtcat ggtcttttcc
      181 ctccccctcg gagccgaagc ccggctgagc tgacctaccg agtacagcgc tgagtccgcc
      241 gtcgcccgcc acgtgaaatg gttgcccagg caaggcatgg aacgatcgct gctgcgctcg
      301 gttctgattc ttctatgagg tgagccaagg cttccagcgg cgtcccgccc ggttacagct
      361 cccgctaggt ctacccgagc agtggccgct cggccagaga tgcgcgggcc tcgtcaagca
      421 agatgcgttc agctttgtga tacatggcct tggctgaggc gggcgtgtcc ccaactgcgg
      481 tgaggcctac acgcccgagc tccgtcaggc agctgatcat atggaacacg acgccttgct
      541 gtctggctgg gtcgaaatgc agaccgtgtc gcgccactat atcgaatagg tcgtctacgg
      601 ctagtccgcg gagcatgggc gattcgagat gatctgtcgc aacgagatgc ttctcccggt
      661 tgtttggggt aaggaacagt gccgttgccg ggtcgtaccg accgtcagtg aggaactgca
      721 aggtgaggaa gggatgagtc gttccacctt tccgaagatt cagctcaatc gcatacgtcg
      781 tccaggagcc gtcgcccgac cgcacaacga caaagtcgat agcaaatcgg cccagcacac
      841 cttcatgggc cagtcgttcg ccgatccgct gcgcatccgc gctgatcatc ctggcgtatt
      901 cgaaatctgc gggaaacgtg caccccaagt agctctgccc gctagggccg cccagcattt
      961 ggtcgtgggt ggacaggagc tctacttctc cgaagggtgt gactcgcagt tgaacgctcg
     1021 gactgcgcaa ctcaaggccg gtgatgcgct cctcgacgat gccaccccgc tcggcgagct
     1081 ttgcggcata ggagctgaaa ggagtgcctg gcagctcgaa tgccatttcc tgcacgcgac
     1141 gtgccgtttc ctctttttca cccggcgacc cgggaacggt caggttgcgc aggtcgacca
     1201 gcgcgttgcc ctcgccggac acgccttcgt taagcttaac caatgcct
//
LOCUS       DASRPQ010000022         1687 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_629479, whole genome shotgun sequence.
ACCESSION   DASRPQ010000022 DASRPQ010000000
VERSION     DASRPQ010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_629479"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..333
                     /locus_tag="VFD73_00255"
     CDS             <1..333
                     /locus_tag="VFD73_00255"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZI72462.1"
                     /translation="LNPYCFPGFSLHDELALLVEAGLTPMEALQAATRNPAIFLNATD
                     SLGTIATGKLADLVLLDADPLADIHNTTKINAVVLDGQLLDQAARQRLLDFVRLQVSL
                     PPPDTARH"
     gene            complement(338..1345)
                     /locus_tag="VFD73_00260"
     CDS             complement(338..1345)
                     /locus_tag="VFD73_00260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72463.1"
                     /translation="MTHWCGVLGAALWLAACSDLNRPSSGGGGGFLADRYPCDQGIGN
                     DPQVVWHEDFEAGSVPAVTARYNEYQNTSGMALVADKPSASCGAASMRLTSGGSVSAT
                     DLYKKPLKPDGSGYDELFVRWYVKYQAGAPWHHSGVWFGGYNPPTDWPNPQAGTRPVG
                     DDRVSIAMEPIWGVGSPNPRFDFYDYWMTMHTCSSCAGAYWGNALVSRNAFTADDDQW
                     ACVEVHAMLNTDVASAAGAELEVWKNDVLVQHFPETGGAGAGAIGDWVQDHYCPAGAD
                     GAQCNYSPTAPGPLGLQFRSSAALQLNHLWLQNYITDTSTGSVWFDDVVVATTRIGCL
                     R"
     gene            complement(1409..>1687)
                     /locus_tag="VFD73_00265"
     CDS             complement(1409..>1687)
                     /locus_tag="VFD73_00265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72464.1"
                     /translation="RPRPRPRRCSTCARLAVDGAAPAEVISAALRAAGEQRKGSRPPR
                     SRIARDHSHSVVELDLGLSRKTVVVLRHEDLVAEGVVRHSLLGSKRRS"
BASE COUNT          279 a          578 c          536 g          294 t
ORIGIN      
        1 ctgaacccgt attgctttcc tgggttcagt ctccatgacg agcttgcctt gctggtggaa
       61 gcgggattga cgccgatgga ggcactgcag gctgccacca ggaatccggc catcttcctg
      121 aatgctaccg attcgcttgg caccatcgcg accgggaagc tggcagacct cgtgctcctg
      181 gacgcggacc ctctagcgga cattcacaac acgacgaaga tcaatgcggt tgtgctcgac
      241 ggacagctgc tcgaccaagc cgctcggcag cgactcctgg acttcgtgag gctgcaagtg
      301 tcgctcccgc cgccggacac ggcacgacac taatctgcta gcggagacag ccgatccggg
      361 tcgtcgccac gaccacgtcg tcgaaccaca cgctgccggt gctcgtgtcc gtgatgtagt
      421 tctgcagcca caggtggttc agttgcaacg ccgcgctgct ccggaactga aggcccagcg
      481 ggcccggcgc cgtaggcgag tagttgcact gcgccccgtc ggcgccggcc gggcagtagt
      541 ggtcctgcac ccagtcgccg atcgcccccg cccccgcccc cccagtctcg gggaagtgtt
      601 ggacgaggac atcattcttc cacacctcga gctcggcccc tgccgcggat gccacgtccg
      661 tgttgagcat ggcgtggacc tcgacacaag cccattggtc gtcatccgca gtgaaggcat
      721 tgcggctgac cagcgcgttg ccccagtagg caccggcgca gctcgagcac gtgtgcatcg
      781 tcatccagta gtcgtagaaa tcgaagcgcg gattgggtga gccgacgccc catatcggct
      841 ccattgcgat ggacacgcgg tcgtctccga caggcctggt cccggcctgc gggttgggcc
      901 agtcagtggg agggttgtac ccgccgaacc agacgccgct gtggtgccac ggagcgccgg
      961 cctgatactt gacgtaccag cgcacgaaca gctcgtcgta gcccgagcca tccggcttga
     1021 gaggcttctt gtataggtcc gtggcgctga ctgagccacc ggacgtgagc ctcatcgagg
     1081 cggcaccaca gctcgccgat ggcttgtctg cgaccagcgc catgccggac gtgttctggt
     1141 actcgttgta gcgcgcggtt accgccggca ccgagcccgc ttcgaagtct tcgtgccaga
     1201 ccacctgcgg atcattgccg atcccctggt cacaggggta gcggtcggct agaaagcccc
     1261 ccccgccccc gctcgaaggt ctgttcaagt ccgagcaggc tgcgagccag agcgcagctc
     1321 ccaggactcc acaccagtgc gtcatgacca atctctacgt ccaggctgtc ccggctgacg
     1381 gtgataagac tcacgccact ccggggcatt agctgcgtcg cttcgatccc agcagcgagt
     1441 gcctgacgac gccttctgca accaggtctt cgtgccgcag cacgacgacc gtctttctgc
     1501 tcagcccgag gtcgagctcc actaccgaat ggctgtggtc ccgggcgatg cgcgatcggg
     1561 gagggcggga tcccttccgc tgctcgcccg ccgccctgag cgcggccgag atcacctccg
     1621 ctggcgcagc gccgtccacc gcgagccgcg cgcaggtgga gcagcggcgg gggcgggggc
     1681 gggggcg
//
LOCUS       DASRPQ010000023         1048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_315456, whole genome shotgun sequence.
ACCESSION   DASRPQ010000023 DASRPQ010000000
VERSION     DASRPQ010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_315456"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..548
                     /locus_tag="VFD73_00270"
     CDS             <1..548
                     /locus_tag="VFD73_00270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72465.1"
                     /translation="ARAHPHAFPLVATRPPSAPWVNPPLRSLRWVEAMLSGLAGEGFS
                     DEQVLFTYRTFNGFLLGYLLLETSAMALRDPKPGDGSFASTDTLSGEFSSPGGIATAD
                     PVPGGLSPARSPEQRAAIADAGSPRELIDPADEIDARRFPTLHRLAAGLAQDQWEQEF
                     ETGLAHMLDRVASFVADGSGP"
BASE COUNT          170 a          351 c          337 g          190 t
ORIGIN      
        1 acgcccgggc gcatccgcat gctttcccgc ttgtcgctac ccggccgcct tcggctccgt
       61 gggttaatcc gccgcttcgg tcgctgcgct gggtcgaggc gatgctgagc ggattggccg
      121 gagagggctt cagtgacgag caggtgctgt tcacctaccg gacctttaac gggttcctcc
      181 tcggttacct gctcttggag acgagcgcca tggcgctgcg tgatccgaag ccaggggacg
      241 gatcgttcgc cagcaccgat accctttccg gcgagttcag ctcacctggc gggatcgcga
      301 cggccgatcc ggtgcccggc gggctgagtc ctgcccgttc tcctgagcag cgagcggcga
      361 tcgcggacgc cggcagcccg cgcgagctca tcgaccccgc ggacgagatc gacgccaggc
      421 gtttcccgac gctgcaccgc ctggcggccg gcctcgccca ggatcaatgg gagcaggagt
      481 tcgagacagg cctggcccat atgctcgacc gcgttgcgag tttcgtggct gacgggtcgg
      541 gcccctgacg aggctgatgt cgtaagcgcg gacattgctg ccgcagcccc ggcctgatcc
      601 ggatctgcct ggaagggaat ttgcgactcc caggttggcc gcagcgtacc tgacctgctc
      661 tgatcacgcg cgaccaaggc ttccgcccgg acgcccgcta ccggacattt taaagtggac
      721 gccgtaagct tctatagtaa gtttctgacg taagcttacc gggtaagtca cttggtggtg
      781 cctgcggggt ccagccacac gatccatggc accagccgcg ctatcagccg cagaccaccc
      841 ggatttcagg gcctggcttg ccacctacga gcgcaggccg gcccgttcac agcaaagcgg
      901 aggcgcgacg ctgaagtcaa ggcgttaccc cattaccgag ctaccggtaa ccctgcagcg
      961 ctcgtgccgg gacgcacacg agacattcct gtcggcgctc gatgacgcgg tacttatcca
     1021 cgggacgggc gatctggctc atcgggcc
//
LOCUS       DASRPQ010000024         1039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1569442, whole genome shotgun sequence.
ACCESSION   DASRPQ010000024 DASRPQ010000000
VERSION     DASRPQ010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1569442"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..377)
                     /locus_tag="VFD73_00275"
     CDS             complement(<1..377)
                     /locus_tag="VFD73_00275"
                     /inference="COORDINATES: protein motif:HMM:NF025092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HZI72466.1"
                     /translation="MRTRRQLFAFATLVGFAGRLTAQQPTTVSGHVNREDGAPLPAAT
                     VSIPSLGISTTSRGDGSYAMLVPASHLGERVALMVRAIGFKPTTTEITLAASGVVQDF
                     GLASNPLQLGEIVVTGAGTVSEV"
     gene            426..584
                     /locus_tag="VFD73_00280"
     CDS             426..584
                     /locus_tag="VFD73_00280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72467.1"
                     /translation="MLQAIRFSQGMGVEVGGRAMPDDTAQLESRQYSQTTNLGDTSDI
                     LGWAFQTE"
     gene            605..997
                     /locus_tag="VFD73_00285"
     CDS             605..997
                     /locus_tag="VFD73_00285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72468.1"
                     /translation="MRLQFVALVFLLAVGSAPACGLFSSRHHQTPPPSSAPSQVQVAV
                     TNHNWSDITVYLLAGGLPQRLGMVSALSEATFDFSSLRLNTSGGVRLRALPVAGRPFT
                     SETILVLPGQAIFWTLENNLETSNFTVY"
BASE COUNT          180 a          313 c          345 g          201 t
ORIGIN      
        1 tcgacctcgg agacggttcc tgccccagtg accacgatct cacccagctg gagcggattc
       61 gacgccaggc caaagtcctg gactaccccg gacgcggcga gggtgatttc ggtggtcgtc
      121 ggcttaaagc cgatagctcg aaccatcagc gcaacccgct cacccagatg gctcgcgggc
      181 acgagcatcg cgtagctgcc atcgccgcga gacgtggtgc tgatcccgag acttggaatg
      241 gagacggtcg ctgcgggcag tggggcgccg tcctcacggt ttacatggcc actgacggtg
      301 gtgggttgct gggcggtgag tcggccggcg aatccgacca gcgttgcaaa ggcgaaaagc
      361 tgacgacggg tgcgcacgat tcgtcctccc tgcgtacgag gttggagcgt gctggtgcct
      421 ctggggtgct gcaggcgatc agattttctc agggtatggg cgtcgaagta ggtggacgcg
      481 ccatgccaga cgatacggca cagctggaaa gtcgtcaata cagccagact accaacctcg
      541 gcgacacgag tgatattttg ggttgggcgt tccaaaccga atgaccggga cacccggagg
      601 tcacatgcgg ttacagttcg tcgcgctggt gtttctcctc gcggtgggct ccgcgcccgc
      661 ttgcggtttg ttctcctccc gtcatcatca aacgccgcca cccagcagcg cgccgagcca
      721 ggtgcaggtc gccgtgacca atcacaattg gagtgacatc accgtctatc tgctggcagg
      781 cggactcccc cagcggttgg gcatggtgtc ggcgctgagc gaagccacct tcgatttctc
      841 gtcactgcgg ctgaacacca gtggaggtgt gcggcttcgt gcgctgccgg tggcgggccg
      901 gccgttcacc tcggagacga tcctggtgct gccagggcag gcgatcttct ggaccctcga
      961 gaacaatctg gagacgtcca attttacggt gtactgagcg tctcgtccga acggcgctgc
     1021 tgcgcgggct ggccctggg
//
LOCUS       DASRPQ010000025         1080 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4077579, whole genome shotgun sequence.
ACCESSION   DASRPQ010000025 DASRPQ010000000
VERSION     DASRPQ010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4077579"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..430)
                     /locus_tag="VFD73_00290"
     CDS             complement(<1..430)
                     /locus_tag="VFD73_00290"
                     /inference="COORDINATES: protein motif:HMM:NF013183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-binding protein"
                     /protein_id="HZI72469.1"
                     /translation="MNAEIVSIGTELLLGNITDTNATFLTQELAALGINCYWVSQVGD
                     NPARLEEVLRRAWQRSDLIILTGGLGPTEDDVTRETISALLGETMEVQADLEADLRAF
                     FSSRNLVMPEQNRKQATLIPSATVLPNPIGTAPGWWVERAQ"
BASE COUNT          173 a          340 c          337 g          230 t
ORIGIN      
        1 cctgcgcccg ctcgacccac cagcccggcg cggtgccgat ggggttcggc aacaccgtcg
       61 ccgaggggat cagcgtggcc tgcttgcgat tctgctccgg cattacgagg ttgcggctgg
      121 agaagaaggc acgcaggtcg gcttcgagat cggcctggac ctccatcgtc tcgcccaaca
      181 aggcgctgat cgtctcgcgg gtgacatcgt cctcggtcgg tcccagcccg ccggtcagga
      241 tgatcagatc ggagcgctgc caggcccggc gcagtacctc ctccagccgc gccgggttgt
      301 cgcccacctg cgacacccag tagcagttga tccccaatgc agccagctcc tgggtcagaa
      361 acgtggcgtt cgtgtcggtg atgttgccca gcaacagttc ggtgcctatg gagacgatct
      421 cggcgttcat agcatccttt acctgtggag ggtagcgcgt ggttgatggt tcgtggctca
      481 cgctaccgcg gcgtgggctg acgcgcctat tatatcacag tgcctgtgcc ggcaagtgtg
      541 actgccggac ggtgaataat tcggtaaggt aggttacagc ccggtgaaca tccatccatt
      601 ataatcatgt gtatattact gagaaccccc gccgggcgcg ggacctgggt tatgcttatg
      661 actggtcggg ctatgataat cgcacagcgc cctatccgtg ctgcggtgat cgccaccgcg
      721 ggcgggtgtt gttgcgcgtg tccccggctg gccgcgtgcg cctgtcgcgt ggtcagcctc
      781 cctccgcctg gtccggctcc cggttcgtct gcctgagcaa ccgctcacat ccacattggc
      841 gtggtgatcc atattgctga attcgggggc tggccgcatg gtcagccctt tgtcgttgcc
      901 tggaggccat tttggatacg atagctatcc caacattcac cccgccgctc gcctatcagc
      961 gggatgattt aatcggtcag atcggcaata caccgttgct gcgcctggat cggctggccg
     1021 ccgcgcaagg catcgccccg gcggtcgcgc tatacgccaa agcggagtgg tttaaccccg
//
LOCUS       DASRPQ010000026         1216 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_942658, whole genome shotgun sequence.
ACCESSION   DASRPQ010000026 DASRPQ010000000
VERSION     DASRPQ010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1216
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_942658"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..913
                     /locus_tag="VFD73_00295"
     CDS             <1..913
                     /locus_tag="VFD73_00295"
                     /inference="COORDINATES: protein motif:HMM:NF024930.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72470.1"
                     /translation="GDYVCGLSAAGTILCQGILLVNYDGGASISTVLTPLDHQVPVDT
                     LATGSTHFCGLTSAGAAWCWGDLNAGMRGTGQPEGANWSLQPNQVAGGLIFTSIGAGV
                     SHTCGMTSEGTVFCWGTGSRLGAPSAQLDTSSSNCGLSTQGGAPCAHAPVQTELPAPA
                     RALFVGPSATCAVTTTGELWCWGSLFGEAAETIAPRRIDAPTDLISVALGWEHACMLT
                     MSGQAYCLGLNTAGQLGTGASGPPQAMPVAVSGDLRFATLSASSNTTCGITAKGALYC
                     WGGNDFGQLGTGDRIQREAPVRVRLQD"
     gene            920..1129
                     /locus_tag="VFD73_00300"
     CDS             920..1129
                     /locus_tag="VFD73_00300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72471.1"
                     /translation="MTITRTDGIQWRTLVRPSLLATTLAFAPACSRAPEAHAPARLAA
                     AALADPTFTRIRRSPGFRVYFIAES"
BASE COUNT          204 a          406 c          391 g          215 t
ORIGIN      
        1 cggcgattac gtctgcggcc tttccgcggc cggcaccatc ctgtgccagg gaattcttct
       61 cgtaaattat gacggcggtg ccagcatcag cacggtgctg actccgctgg accaccaggt
      121 gccggtcgat accctggcca ccggcagcac ccacttctgc gggctgacga gcgccggcgc
      181 cgcgtggtgc tggggagatc tcaacgccgg catgagaggc accggccagc ccgaaggcgc
      241 caactggagc ctgcaaccca atcaggtcgc cggtggattg attttcacca gcatcggtgc
      301 gggagtgtcc cacacctgcg ggatgacgtc agagggaacc gtgttctgct ggggaacggg
      361 atcgcgtctc ggtgctccgt cggcccagct cgacaccagc tcatcgaact gcggtctcag
      421 tacccagggt ggtgcaccct gcgcccacgc accggtgcag accgagctgc ccgctccggc
      481 acgggcgctc ttcgtgggac cgagcgccac ctgcgcggtg acgaccaccg gcgagctttg
      541 gtgttgggga agcctgttcg gcgaggcagc cgagaccatt gctccgagac ggatcgacgc
      601 tccgaccgac ctcatatcag ttgccttggg ttgggaacat gcctgcatgc tgaccatgtc
      661 ggggcaagcc tactgcctcg gactcaatac cgcgggtcag ctcggcaccg gagcgagtgg
      721 tccgcctcag gccatgccgg tcgccgtctc aggcgatctc cgctttgcca ccctgagcgc
      781 cagctcgaac actacctgcg gcatcacggc gaagggtgcg ctgtactgct ggggtggcaa
      841 tgatttcggc cagctgggca ccggtgacag gatccagcgt gaagccccgg tgcgggtgcg
      901 gctgcaagac tgagcacaga tgacaatcac gaggactgac ggcatccagt ggcgaaccct
      961 cgtccgtccg tctctcctgg ccaccactct cgccttcgct cccgcgtgct cccgcgctcc
     1021 tgaggcgcat gcgccggcgc gcttggcggc ggcagcgctg gccgacccaa catttaccag
     1081 gatccggcgg agccccggtt tccgggtcta cttcatcgcg gagtcctgat gaagaaactg
     1141 ggtgaactct tgccgagaac ggggagtctc attacgactc acgttcaggc tcggctcgcg
     1201 agcacatgag tgtcac
//
LOCUS       DASRPQ010000027         1107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2645, whole genome shotgun sequence.
ACCESSION   DASRPQ010000027 DASRPQ010000000
VERSION     DASRPQ010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2645"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1080
                     /locus_tag="VFD73_00305"
     CDS             <1..1080
                     /locus_tag="VFD73_00305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72472.1"
                     /translation="LNTSPAWLSKPASLLYVSNRDGGRDLYQVPLSRSGKPAGEPVRL
                     TTGLNAATVSISADGRRLVYAAFNRTTNVWSIGVPQSGSLPVERAEPVTTGNQEIEAF
                     DISADGRWLIFDSDRGGTQQLYRMPLQGGEVEQLTNGDEPSMAPSLSRDGREIAYHTF
                     RNGIRQLFVLPAEGGTPVQVTHDSFQNRMAFWFPDGRSIAFVRNAVLPGAATRMVTRD
                     ENGRWSAPRVLLDGGDLAVPSPDGRSVLTITRDGDFVIVPVSGGPPRRVLSGRHTSPA
                     RGYIWAWSSDGRFVYYTGKDPANKVFGIWRVSAAGGVPQLAVSFDDPSRYLVRPWMRI
                     HGNRIYFSRSDQQSDVWMTEIQGER"
BASE COUNT          197 a          342 c          367 g          201 t
ORIGIN      
        1 ttgaatacca gcccggcctg gctgtcgaag ccggcatcgt tgctgtacgt atcgaaccgg
       61 gatgggggac gcgacctcta ccaagtgccg ctctcgcgtt ccggaaagcc tgcgggtgaa
      121 ccggtgcgac tcaccaccgg actcaatgcg gccacggtga gcatctccgc cgacgggcgg
      181 cggttggtat acgccgcgtt caaccggacc acgaatgtgt ggtcgatcgg ggttccgcaa
      241 tcgggcagcc tcccggtcga gcgagccgag ccggtgacca ccggcaatca ggagatcgag
      301 gcatttgaca tctcggccga tggccgctgg ctgatcttcg attccgaccg gggcggcacg
      361 cagcagctct accgtatgcc gcttcagggc ggtgaggtgg agcagctcac caatggcgat
      421 gagccttcca tggcgccgtc actctcgcgg gacggacgcg agattgcgta tcacaccttc
      481 cgcaacggca tccggcagct cttcgtattg ccggccgaag gcgggacacc ggtgcaggtg
      541 actcacgaca gcttccagaa ccgaatggct ttctggtttc ccgatgggcg atcgatcgcg
      601 ttcgtgcgga acgcggtgct gcccggcgcg gccacccgca tggtgacccg tgacgagaac
      661 ggccggtgga gcgctccccg agtcctgctc gatggtggtg acctggcggt gccatcacct
      721 gatggacgct cagtgctcac gattacgaga gacggagact tcgtgatcgt cccggtctcc
      781 ggtggacctc cccgccgagt gctctcaggc aggcacacat caccggcacg cggatacatc
      841 tgggcctggt cttcggatgg ccgcttcgtc tactacaccg gcaaggaccc agcgaacaag
      901 gtattcggca tctggcgggt ctcagcggcc ggcggggtac ctcagctcgc ggtgtcattc
      961 gatgacccgt cgcgctatct ggtgcgaccg tggatgagga tacacggcaa ccggatctac
     1021 ttcagcagga gcgatcagca aagcgatgtg tggatgacgg agattcaagg tgagcggtga
     1081 gatgcgtcct gggcctcagg ctcgcag
//
LOCUS       DASRPQ010000028         3876 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3139590, whole genome shotgun sequence.
ACCESSION   DASRPQ010000028 DASRPQ010000000
VERSION     DASRPQ010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3876)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3876)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3876
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3139590"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2129)
                     /locus_tag="VFD73_00310"
     CDS             complement(<1..2129)
                     /locus_tag="VFD73_00310"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HZI72473.1"
                     /translation="MYLRTSEVVPAGTGSGLATLTPTCAGLVVPLPPSSRFLLTGIAA
                     LVLAGLFLLWLQWRRRRAAERLVAELRSQLQTVTATMREGVITCDMDRKLTFVNPAFE
                     RLTGYPDEELRDQEFLQYIHPNDRPAIIAEWDRLAQGGALRDQEYRVVTRAGQIRWCS
                     SSWEPMRDESGRQIGYMGTEFDITERKLAEEEMRVDTELFQAVLEVEQAVMAAGLDSQ
                     TVMRAIAERSMALTGASGAVIEAIVGDELVPQIHVGTEAPTLKINSSLSGLCVRTGEL
                     QRSDDTYSDPRIEHTAYRDLGIRSLLVVPLKDEPRILGVLKVVSPEVAAFSDREAKAL
                     RLLGGLMGAALSHAAAFEGRQSRLEERTRALQESEQRFKQLVDVAQEGIWVTDDRGVI
                     TYVNQRMADLLGHPSGNILGRPVYDFIEADSRPGAKHALSRRGSRPGQAQDLRFRKQD
                     GSQLWGLVSSSPILGKNGTLVGTVGMVTDITERKRAEEQLRRSADRLAMLHDMDQAIA
                     AAQSPAEIGRAALARMRRMVNCQYCAVILFDVRRREAQMIAGFARGVHLAPTRIQPGE
                     LFAEAFRADSVRYIEDLAVLETPSPQQRELLAEGIRTFLSVPLLVEGAAIGEITLGAT
                     APAAFEAEHRDIALEVAAPIAIAIQHARLREELARQAAELERRVAERSAAVRAVTAEL
                     ETVLYSVSHDLRSPLRQLLGFSNLLLE"
     gene            2152..3237
                     /locus_tag="VFD73_00315"
     CDS             2152..3237
                     /locus_tag="VFD73_00315"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HZI72474.1"
                     /translation="MAPGTGNPYSSAMPFLDSKRNRAAFLIFVLGIALVWTLWPFSTG
                     LIGAPVLYVVFAPVFRWLSARMRPGLAAGLVVLLGVILILGPGVSLVGVIAGEAQDMA
                     SGVIQSPLLTRLRELKIGPYDVGAQIEALGSRLVSFIGSSALGLIGTATRLGIQLTIM
                     FFGLFYLLLAPRTAWRQLQPFVPFSRRNTEILRQRFRDVTISTLVGTGLTATVQGLLV
                     GLAFWIVGIPNAVFWGVVTVVLAILPVVGSGLVWGPGALSLALGGSYGRAIGLALWGV
                     LVVGNVDNVIRPMVFRRWAQIHPFITIIGAFAGIQYFGLLGLLIGPLAISYFFELIRM
                     YRAEYLDDEEAAEEIEADARKPVTQLS"
     gene            complement(3232..>3876)
                     /locus_tag="VFD73_00320"
     CDS             complement(3232..>3876)
                     /locus_tag="VFD73_00320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HZI72475.1"
                     /translation="LGVSIVVAVYLLANLAYVRTLGLAGLAASTAPAADSMEALLGKP
                     GRTLIAAGIALSTFGFLNLVILVSPRVYQAMAGDGLFFPSVARLHPRYRTPSGAILFQ
                     GAWAILLTLTGRYGDLLDYVVFGDWIFFGATAATLFVFRARETAGQPAHVRFRMRGHP
                     VGTAIFVLAAVYVVVGSIASNPGNALKGTVLILLGIPVFLWWDGRRIRSAKEPL"
BASE COUNT          688 a         1236 c         1221 g          731 t
ORIGIN      
        1 tcttcgagca gcaagttgga aaatcctagt agctgccgca ggggcgaccg cagatcgtga
       61 gataccgagt agaggaccgt ctccagctcg gccgtgacgg cccggactgc cgcgctccgc
      121 tccgcgactc gccgctccag ctctgctgcc tggcgggcga gctcctcgcg aagccgggca
      181 tgctgaatcg cgatcgcgat cggggccgcc acttcgaggg caatgtcacg atgctcggcc
      241 tcgaatgcgg ccggagcagt ggcgcccaat gtgatctccc cgatggccgc accttcgacc
      301 aggagaggca cggaaagaaa cgtccgaatg ccttcggcca gcagctcgcg ctgctgagga
      361 gacggcgttt ccagcaccgc cagatcttcg atgtagcgca ccgaatcggc ccggaacgcc
      421 tccgcgaata gttcgcccgg ctggatccgc gtgggtgcca ggtgaacccc gcgggcaaaa
      481 cccgcgatca tctgcgcttc acgccggcgt acgtcgaaca ggatcacggc gcaatactgg
      541 cagttcacca ttcggcgcat ccgggcgagt gcggctcggc cgatctcagc aggagactgg
      601 gccgcggcga tggcctgatc catgtcgtgc agcatggcca gccggtcggc cgatctccga
      661 agctgttcct cggcgcgctt gcgctcggtg atgtcggtga ccatccccac agtgccgacc
      721 agcgttccat tctttcccag gatcggactg gaggaaacca acccccagag ttggctgcca
      781 tcctgtttgc ggaaccggag gtcctgcgct tgacccggcc gagaaccccg ccggctcagc
      841 gcgtgtttgg cgccgggccg cgaatcagcc tcgatgaagt cgtacaccgg gcgacccagg
      901 atattgccgc tggggtgacc caggagatct gccattcgct ggttcacgta ggtgatcacc
      961 ccacggtcgt cggtgaccca aatcccctcc tgggcgacgt cgaccagctg cttgaaccgc
     1021 tgctcgcttt cctgcagcgc gcgggttctt tcctccagac gcgactggcg tccctcgaaa
     1081 gctgccgcat ggctcagcgc ggcacccatc aagcccccca ataaccggag tgccttggcc
     1141 tcccgatcgg agaacgcggc tacttcgggg gaaacgacct tgagtactcc gaggatccga
     1201 ggctcgtcct tgagaggaac caccaggagg gatcggatgc ccagatcgcg gtaagcagtg
     1261 tgctcgatgc gcgggtcgct ataggtatcg tcgctccgct gcagctcccc ggtccggacg
     1321 caaagcccgg agagactcga gttgatcttg agcgtgggcg cttcggtccc gacatgtatc
     1381 tgcgggacca gctcatcgcc tacgattgcc tcgatgacgg cgccactcgc tccggtcagc
     1441 gccatgctgc gctccgcgat cgcccgcatg actgtctggg agtcgagccc cgcggccata
     1501 acagcctgct ctacctcgag caccgcctga aagagctcgg tgtcgactcg catttcttct
     1561 tcggcgagct tgcgctcggt gatgtcgaac tccgtcccca tgtagccgat ctgacgaccg
     1621 gactcgtctc gcatcggctc ccaggagctg gagcaccagc gtatctgccc cgctcgggtc
     1681 accactcgat actcctggtc gcggagggct cctccctgcg ccagtcgatc ccactcggcg
     1741 atgatcgcgg gccggtcgtt cggatggatg tattgcagga attcctggtc ccggagctcc
     1801 tcatcgggat agccggtgag ccgttcgaaa gccggattca cgaaagtgag tttgcggtcc
     1861 atgtcacagg tgatcactcc ctcccgcatg gtcgcggtaa ccgtctggag ctggctccgg
     1921 agctcggcta ccagccgctc ggccgcccgc cgccggcgcc actgaagcca gagcaggaac
     1981 agtccggcaa gcaccagggc agcgatgccg gtgagcagaa accgcgagct cggaggtagt
     2041 gggaccacga gtcctgcaca ggttggagtc aacgtcgcga ggccggagcc agtgccggcc
     2101 ggcaccacct cggacgttcg aagatacatc ccggccagga cttggtcgag gatggcgcca
     2161 ggtaccggga atccctactc ttccgccatg ccattcctgg attccaagcg caaccgcgcg
     2221 gcattcctga tctttgtctt gggaattgcc ctggtctgga cgctgtggcc gttcagcacc
     2281 ggactgatcg gtgcccctgt cctctatgtt gtgttcgcac cagtctttcg gtggctgtcg
     2341 gctcgaatgc gaccagggct cgccgccggc cttgtggtgc tattgggggt gatcctgatc
     2401 ctgggaccag gggtctcact cgttggcgtc atagccggtg aagcgcagga catggcaagt
     2461 ggtgtcattc aaagccccct tctcacccgg ctgcgtgagc tgaagatcgg gccgtacgat
     2521 gtaggtgccc agatcgaggc gctcgggtcg agactggttt cctttatcgg ctccagtgcg
     2581 ctcggcctga tcggtaccgc gacccggttg ggtatccagc tgaccatcat gttcttcggt
     2641 cttttttacc tgctgctggc accccgcaca gcgtggaggc agctacagcc gttcgttcca
     2701 ttttcccggc ggaataccga gatcctccgc cagcgattcc gggacgtcac catatcgact
     2761 ctggtcggca ccgggctgac cgctaccgtg cagggactcc tggtgggact cgccttctgg
     2821 atcgtgggaa ttcccaatgc ggtgttctgg ggcgtggtca ccgtagttct ggcgattctc
     2881 cccgtagtgg gaagcggact ggtttggggt cccggtgcac tctcgttggc gctggggggg
     2941 agctacggtc gggcaatcgg tctggcgctc tggggagttc tggttgtagg aaacgtcgac
     3001 aacgtgatcc ggccgatggt gttccggcgc tgggcccaga tccacccgtt catcaccatc
     3061 attggagcct ttgcgggtat ccagtacttc ggtctcctcg gattattgat cggtcccctc
     3121 gccatctcct atttcttcga gttgatccgg atgtaccggg cggaatatct ggatgatgaa
     3181 gaggctgccg aggagatcga ggccgacgcg cggaaaccgg tgacgcaatt gtcataacgg
     3241 ctccttcgct gagcggatcc gccggccgtc ccaccataga aacaccggta ttcccaacag
     3301 gatcagaacg gtgcccttga gagcgttgcc ggggttggat gcaatcgagc caaccaccac
     3361 gtacacagcg gcaaggacga agatcgctgt ccccaccggg tgtccccgca tcctgaatcg
     3421 cacatgcgcc ggttgcccag ctgtctcgcg tgctcggaag acgaagagcg ttgcggcggt
     3481 cgccccgaag aagatccaat caccgaacac cacatagtcc aagagatcgc cgtaccggcc
     3541 ggtgagggtg agaagaattg cccaggctcc ctgaaacagg atggcaccgc tcggggtgcg
     3601 gtaccggggg tgcaaccgcg ccacgctggg aaagaagagg ccatcgcccg ccatggcctg
     3661 atacactctg ggagagacga gaatcaccag gttgagaaat ccaaaggtcg agagcgcaat
     3721 gcctgcggca atgagcgtgc ggcctggctt accgagaaga gcctccatcg aatcggcggc
     3781 gggtgcagtg cttgccgcca gcccggccag gccaagggtc cggacatagg cgaggttcgc
     3841 gaggagatac acggcaacga cgatgctcac gcccag
//
LOCUS       DASRPQ010000029         4731 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4391653, whole genome shotgun sequence.
ACCESSION   DASRPQ010000029 DASRPQ010000000
VERSION     DASRPQ010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4731
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4391653"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..196)
                     /locus_tag="VFD73_00325"
     CDS             complement(<1..196)
                     /locus_tag="VFD73_00325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72476.1"
                     /translation="MNRAIVHVASGREWRGGQRQVWLLARELSRRGVPQVVVTGRGSE
                     LASRLTMDGISVRTVPWKLGL"
     gene            complement(193..2214)
                     /locus_tag="VFD73_00330"
     CDS             complement(193..2214)
                     /locus_tag="VFD73_00330"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI72477.1"
                     /translation="MTHPPLPRLATQSRGTSDTPGLDLVQRLTAFGQEVAGTLRRASV
                     IDLLVRHVRESLTPSEIAVALFQQAETIDFVLGWPPGRSNPRPLLELASRRGPLLIHD
                     GLETLLRDAGLAVPPLTPGSWLISPFIAKGRVTGAIAVRGEAGRYEPADLILLEGLVS
                     QASIALESARLIDLHDDGRRTWQEVVDAISPALCIVDRSGAIRRANRAFADLVNAPPA
                     SLIGRPWQAFAPPEWSAELQRALDQQGVGREVELRTGERTYAVTAVPISSADRSAVVL
                     LFDDQTERRRLQDQLIQSEKMSAIGQLIAGIAHDLNNPLASVVGFADFLTEIPHIPPS
                     IREPLTVVREEAERASGIVRNLLGFARKQEHQRRPTALKPLLDATFVLLRNQLMAQRV
                     DALIEVEPDLPMPDIDPNQIQQVFVNLINNAAQAIASTGRPGTIVVRARRWLDGVAID
                     VIDDGPGMAETLAGQVFEPFFTTKPEGEGTGLGLSISQGIVKEHGGRIMLSTEEGSGS
                     TFTVQLPLSTRSATPQADLDAQVHPRRLRVLVVDDEPHILHYMRATLEAWGHIPVVAS
                     DGQEALARAIDEHFDLIISDLRMPRFGGREFYEELTRRNPTMASRLVFSTGDTVRGDT
                     LTFLETLDRPYLHKPFSLAELRTLLADVVRETGVSEEHGALPADALPSV"
     gene            2213..2890
                     /locus_tag="VFD73_00335"
     CDS             2213..2890
                     /locus_tag="VFD73_00335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72478.1"
                     /translation="MIRANTRGRLTAADLQLVILLLSRGSAHRRAYLERRLSSEGPDP
                     LLDTPDLLERLLTVRSMLLPSEALFFYVLVRHALRGFHLEDREVADYIAALLLEFGQR
                     DRAWRVDWNDDQRHRYLVDILADLDATAGDRRFRVMVHLGNYALWLSGLFPDYIAARR
                     LRKAGPDVSYYEALGSRGFGLASDHVLAQEYGLGAVLKTAAERFPALRSALNGVSDRV
                     LFPSFAH"
     gene            complement(2831..3619)
                     /locus_tag="VFD73_00340"
     CDS             complement(2831..3619)
                     /locus_tag="VFD73_00340"
                     /inference="COORDINATES: protein motif:HMM:NF019342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HZI72479.1"
                     /translation="MSLPRIGVSGVVRTWDGADRTGVNGAYVRAVLNGGGVPIILSPL
                     LGPSFAARALDGIEGLVLTGGEDMDPAWYGAEPSPLLSPPSRERDLFELALFAVARQR
                     GLPILGICRGIQLINVALGGTLYQDISSERRGALEHRPDGPRDLRSHRIRLEVGSRVS
                     QALGATELTVNSSHHQAIWQLAPALVATGWSDDGLIEAVESPAGAPWVLAVQWHPEEM
                     YADHTAPERGLFASLAVEAERVRSGSVGEGGKEHAVADAVQRAP"
     gene            complement(3616..4098)
                     /locus_tag="VFD73_00345"
     CDS             complement(3616..4098)
                     /locus_tag="VFD73_00345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72480.1"
                     /translation="MASVLTATLLLGCSSSGDKRAGAAACGLASLAGPTALLGQFSVP
                     NQTLGSPPRNLPERLVVRLVAGPAYRAIVGRSDSLWVIGVEGALPAAVKPGFGVLVLD
                     QGARARGVMLFEGIPVEGAPQIGTVSVGNMTVPLIGIQLDPARIEDPRCAFFPDSVLR
                     "
     gene            complement(4109..4417)
                     /locus_tag="VFD73_00350"
     CDS             complement(4109..4417)
                     /locus_tag="VFD73_00350"
                     /inference="COORDINATES: protein motif:HMM:NF025479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4286 family protein"
                     /protein_id="HZI72481.1"
                     /translation="MILYEVLLEVEPGLAAEVEEHMRRIHIPAILATGCFQRIRFLQA
                     AAGRFRTSYETRSQGELDRYLRDHAPELRSTFSALFPAGVALSREVWVEREAWDQVLS
                     "
BASE COUNT          889 a         1510 c         1481 g          851 t
ORIGIN      
        1 ccaggccgag cttccacggc accgttcgca ccgagatgcc gtccatcgtc agccgagagg
       61 caagctcgct gccccgccca gtgaccacga cctgaggaac gcctcgtctg ctcagctcac
      121 gagcgagaag ccagacctgc cgctgacctc cacgccactc tcgtcccgag gcaacgtgaa
      181 cgatcgcgcg attcacacgc tcggcagtgc gtccgctgga agagctccgt gttcttcgct
      241 gacaccggtt tcccgcacca catccgccag caacgtccga agctcggcca ggctgaaggg
      301 cttgtggagg tagggccgat ccagcgtttc caggaaggtg agggtgtctc ctctgaccgt
      361 gtcaccggta ctgaagacca gccgagacgc catcgtgggg ttccgccggg tgagctcttc
      421 gtagaactcg cgaccgccga accgtggcat ccggagatca gatatgatca ggtcgaaatg
      481 ttcgtcgatt gcccgagcca gcgcctcctg gccgtcggaa gcaaccacgg ggatgtgacc
      541 ccaggcctcc agcgtggccc gcatgtagtg caggatgtgg ggctcgtcgt ccaccacgag
      601 aacgcgcagc cgccgggggt gcacctgagc atcgagatcg gcttggggcg tggcggaccg
      661 ggtggagagc gggagttgca ccgtgaaggt tgagccgctg ccctcctcgg tcgagagcat
      721 gattcgccct ccgtgctcct tgacgatgcc ttggctgatc gagagaccca gaccggtgcc
      781 ctcaccctcg ggtttggtgg tgaagaacgg ttcgaagact tgacccgcca gagtctcggc
      841 catgcctggg ccgtcatcga tgacatctat ggcaactccg tcgagccagc gacgggcgcg
      901 caccacgatg gttcccggcc gccccgttga cgcgattgcc tgggcggcgt tgttaatcaa
      961 attgacgaat acctgctgga tctggttggg atcgatgtcc ggcattggaa ggtcgggctc
     1021 gacctcgatc agggcatcca cccgttgcgc catcaattga tttcgcagca gcacgaaggt
     1081 ggcatcgagt agcggcttga gcgccgtagg ccgccgctgg tgctcctgct tccgggcgaa
     1141 ccccagcaga tttctcacga tcccggaagc ccgttcggcc tcttcccgga cgaccgtcag
     1201 gggctctcga atgctgggtg ggatgtgggg aatttcggtg aggaaatccg caaacccgac
     1261 cacggaagcc agggggttgt tcagatcgtg tgcgattcct gcaatcagtt gcccgatggc
     1321 agacatcttc tccgactgaa tcagctggtc ttgcaaccgg cgccgttccg tctgatcatc
     1381 aaacagcaag accacggcgg accggtcagc gctgctaatc ggcaccgcgg taacggcata
     1441 cgtgcgctct ccggtgcgaa gctcgacctc gcggcctact ccttgctggt ccaacgcccg
     1501 ctggagctca gcggaccatt cggggggtgc aaaggcttgc cagggtcggc caatcaggct
     1561 ggcgggtgga gcgttcacca gatcggcaaa cgcccggttg gctcggcgaa tggcgccgct
     1621 ccggtcgacg atgcagaggg cgggcgagat tgcgtccacg acctcctgcc aggttcgccg
     1681 gccatcgtcg tgaaggtcga tcagtcgggc gctctcgagg gcgatgctgg cctgcgacac
     1741 gagcccttcg agcaggatca ggtccgctgg ttcgtagcga cctgcctcac cgcgcaccgc
     1801 aatggcaccg gttactctac ccttggcgat aaatggtgaa ataagccagc ttccgggcgt
     1861 cagaggggga acggcgagcc cggcatcgcg cagcaaggtt tcgagcccgt catgaatgag
     1921 caggggaccc cgtcggctcg ccagttccag tagagggcgc gggttggagc gcccgggggg
     1981 ccagccgagc acgaaatcga tggtttcggc ctgctggaac agcgcgaccg cgatctcgct
     2041 cggggtgagg ctttcccgga catgccggac caggagatcg ataacggacg cccggcggag
     2101 ggtgcccgcc acttcctgac cgaaggcagt gagccgctgc accaaatcca ggccgggagt
     2161 atcggatgta ccgcgcgact gagtcgcgag tcttggtaga ggagggtggg tcatgatccg
     2221 tgcgaatacg cgaggtcgcc tgactgcggc cgacctgcag ctggtgatcc tgctcctgag
     2281 tcgcggttcc gcgcaccgcc gtgcatacct cgagcggcgc ttgtcttctg aaggaccgga
     2341 tccgctgctg gacacgcctg atctactgga acggctgctg accgttcggt caatgctgtt
     2401 accgtctgag gccttgttct tctacgttct ggtccgccac gcactccgag gattccatct
     2461 ggaagaccgg gaggtggcgg actatatcgc tgctctcctg ctcgaatttg gccaacgcga
     2521 tcgtgcctgg cgcgtcgact ggaatgacga ccaacggcat cggtatctgg tcgacatcct
     2581 ggccgacctc gatgccactg ccggcgaccg tcgcttcagg gtgatggtgc acctgggcaa
     2641 ctacgcactg tggctgagcg ggctctttcc cgattatatc gccgcgaggc ggctgcgcaa
     2701 agcaggtcct gatgtgagct attacgaggc gctgggaagt cggggatttg gccttgcgtc
     2761 cgatcacgtc ctggcgcagg aatatggtct cggcgcagtc ctcaagacgg cggccgagcg
     2821 gtttcccgcc ttacggagcg cgctgaacgg cgtcagcgac cgcgtgctct ttccctcctt
     2881 cgcccactga cccactgcgg actcgctcgg cctccacggc cagcgaggca aacaaaccac
     2941 gttcgggcgc agtgtggtcg gcatacatct cttccggatg ccactgaact gcgagtaccc
     3001 agggcgcgcc ggccggactt tcgaccgcct cgatcagacc atcatcactc catccggttg
     3061 ctaccagagc gggcgccagc tgccaaatgg cttgatggtg tgacgaattt acggtgagct
     3121 cggtagctcc cagcgcctgc gacacgcgac ttcccacctc cagccgtatc cgatgactcc
     3181 gcaagtcccg cgggccgtcg ggccgatgtt ccagggctcc gcgtcgctcc gaggaaatgt
     3241 cctggtacaa ggtaccgccg agcgccacgt taatgagctg aatgccgcga cagatgccca
     3301 gaatcggcag cccgcgttgc cgggcaacgg cgaagagcgc caattcgaat agatcacgtt
     3361 ctcggctggg cggactcaga agcggagagg gctccgcgcc ataccaggcg gggtccatgt
     3421 cctctcctcc cgtcagcacc agtccttcga taccgtccag ggcccgggcg gcaaacgaag
     3481 gacccagcaa gggcgagagg ataatcggga ctcctcctcc attgaggacg gcccgaacgt
     3541 atgcgccatt gactccggtc cggtcggccc catcccaggt ccggaccacc ccgctgacgc
     3601 cgatccgggg aaggctcacc gcaaaaccga atcggggaaa aatgcgcagc gcggatcctc
     3661 gatcctggcc ggatccagct gaatcccgat caacggcaca gtcatgttgc ccaccgacac
     3721 agtgccaatt tgcggagctc cttcgaccgg gattccctca aacagcatga caccacgcgc
     3781 tcgtgcgcct tgatccaaca ccagaacgcc gaacccgggc tttactgcag cggggagcgc
     3841 gccctctacg ccgatgaccc acagagagtc ggaccggccc acaatggccc gataggctgg
     3901 accggccacg agccgaacca cgagccgctc cggcaaattg cggggaggtg agccgagcgt
     3961 ctgattagga acgctaaact gccccaggag cgcagtgggg ccggccagcg atgccagtcc
     4021 gcatgcggcg gccccggcac gtttgtctcc tgacgaactg cagccgagga ggagcgtcgc
     4081 cgttagtacg ctggccaatc gcatccactc aagataacac ctggtcccag gcttctcgtt
     4141 cgacccacac ctctcgcgac aatgccactc cagccgggaa cagcgcactg aacgtggaac
     4201 gcagctccgg tgcatgatcc cggagatatc gatccagctc accctgcgat cgagtctcat
     4261 agctagtgcg gaatcgaccg gcggcggcct gcaaaaaccg gatccgctgg aagcagccgg
     4321 tcgcaagaat ggctgggatg tgaatccgcc gcatgtgctc ttccacctcg gcagcgagtc
     4381 caggctcaac ctcgagaagg acttcgtaca ggatcattgg tgtccgctcc atgtgagttg
     4441 agggagcatg tgagcttgat cacatcctgc gcatcatacg gctgatatgc atcgcacacg
     4501 cgggcaggag ctggttcggt gacctgactg taatcacgaa atcgccacgc ggggcaacag
     4561 ccctgggtgg cgatgtttgt tttgggcccg gccgatccca gctctctatt acagcaatct
     4621 tgaagcggag aaggatactg atgtccccga ggactgccgc actcaatctt cacgagatga
     4681 ttcacccatt ggcgggatcg tcgagtgact acgatcttct gctggagctg a
//
LOCUS       DASRPQ010000030         1503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_316579, whole genome shotgun sequence.
ACCESSION   DASRPQ010000030 DASRPQ010000000
VERSION     DASRPQ010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316579"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..479
                     /locus_tag="VFD73_00355"
     CDS             <1..479
                     /locus_tag="VFD73_00355"
                     /inference="COORDINATES: protein motif:HMM:NF013252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72482.1"
                     /translation="EERYDGWRMLAYKHGRQVRVVSRLGRDHTDRFPELAAAIAAVAP
                     PTLILDGEVARFDETLVSRNEWLRRGLPNRLATSRLYMAFDCLYLAGRDLRKHPLRGR
                     RNWLEDVLEGQQLLFPHVGWPQTASRPGPKSLSAATRVSWQRTLPGPTSAVARWRG"
BASE COUNT          277 a          498 c          460 g          268 t
ORIGIN      
        1 acgaagagag atatgacggt tggcggatgc tggcctacaa acatggtcgc caggtccggg
       61 tcgtgagccg cctcgggcgg gaccatacgg accgcttccc cgagctcgca gccgccatcg
      121 ccgcggtcgc gccgccgacg ctaattctgg atggcgaggt cgcccggttt gacgagaccc
      181 tggtctctcg taacgagtgg ctccggcggg gactgccgaa ccgcctggcg acctccaggc
      241 tctacatggc gttcgactgt ctgtacctcg ccggccgcga tcttcggaag cacccgctgc
      301 gggggcggcg caactggctc gaggacgtgc tcgagggcca gcaacttcta ttcccgcacg
      361 tcggctggcc tcaaacggcc tcacggcctg ggccgaagtc cttgagcgcg gctacgaggg
      421 tctcgtggca aaggactctg cctgggccta cgtcggcggt cgcacgctgg cgtggctgaa
      481 ggtgaagcag gccaactatc gggttaaagc gcgcggctgg gggccgaagg agaaattgca
      541 gtttccgcag cgaccaccca cctcccttcc gagcgactac cgtagccggc gccgtactct
      601 cccgtgccca agaggctcgg gtgcgagaga tcctcggcaa tgatttgcct gggaccctcc
      661 agatgtattt cgtcagcatc tacccgccac cgcacaggtc cccgtcgccc atctcgtagt
      721 ctcgcggcct tcatccgcaa tgtccggccg cccgtggctt gaagcccagt gcggggacgg
      781 ctgtggtccg ggcggaccat gcgccggcaa ggcttctggt ttcgggccgc ctgcgccacg
      841 cgctgctgag ggacagaaga ggggaaggag tggccgtcga gctactccat cacactgtga
      901 caagtgaaga gctgaaaccg atcttgagac tcaatacaac gatctaacag aacctccgcg
      961 cccgccaaac ccggacctga tctatccgag ggacggttca tcatcacgcg ctcattgttc
     1021 cgtcacgaca ctctcctcgg caagctgagt cgaccgagga gtgctcctca acatgctcac
     1081 agcgtggccg atgatctgcg caggatcgaa caagacgaac gaggagaact tgcgccgtat
     1141 cactaagacc acctccagac ttcttggcgt gaccctgctc gccccagcct cctgaacatt
     1201 ttccggccaa accatcagag cgccccgccg tggcagcaga tcatgtagaa gccacatcta
     1261 cttgcgcgct ccaaaatcga tgcctatcct tcaggcctac cgaccgactg ccagccgcgg
     1321 cgccggcgct ttcgacctgc caccgcggct cgcacagggg cacgatgtgg gttccggaaa
     1381 ctctggcagt ccatttccgg aaattctggt aggtgctggg gatgatgcct ccgggtcctg
     1441 ggtcaggtca agtttcgcat gccgggtccg ataggaggcg ccgcgcagct cgagatgccg
     1501 ccc
//
LOCUS       DASRPQ010000031         2572 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4391879, whole genome shotgun sequence.
ACCESSION   DASRPQ010000031 DASRPQ010000000
VERSION     DASRPQ010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2572
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4391879"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1224
                     /locus_tag="VFD73_00360"
     CDS             <1..1224
                     /locus_tag="VFD73_00360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72483.1"
                     /translation="GWSDKASAVAKSMAPISKGVVIVTRLGLRLTTAIVIGSAVASSA
                     SAQTTRWSEQQANAWYAAQPWLVGSNYVPKSAINQLEMWQEATFDPAEIDKELGWAEE
                     LGMNTMRVFLHDLLWQQDSVGFRKRIDQFLVIASRHHIRPVFVLFDSVWDPSPHLGPQ
                     HPPVPGVHNSGWVQSPAVSALADPAQYPRLRDYVQGVIGAYAGDPRVLAWDLWNEPGN
                     ENSDSYGKEELRDKRERVAILLPQAFQWARAAHPTQPLTSGVCCVEWNPDGRNLDRIR
                     QIQLRESDIITFHNYSWPEYFQRQVAWLKKYNRPVICTEYMARPVGSTFDALLPLAKQ
                     QRVGMINWGFVAGKTQTYLPWDSWQHPYVVAEPPVWFHEVLRPDGTPYRQAEVDLIRQ
                     LTGVQSADARRTSLR"
     gene            2085..2567
                     /locus_tag="VFD73_00365"
     CDS             2085..2567
                     /locus_tag="VFD73_00365"
                     /inference="COORDINATES: protein motif:HMM:NF019241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1572 family protein"
                     /protein_id="HZI72484.1"
                     /translation="MSDFRAEYLADIQSQFAKLRSTAERAMVQVPDADFATALDGENN
                     SIAILLKHVSGNLRSRCTDFLTSDGEKPDRDRDAEFVLDSRDTRAALMNAWSRSWDLL
                     AETLRSLRAEDLERTVHIRAEPHTVLRALQRQLGHLAYHVGQIVLLARHWVGPRWQSL
                     "
BASE COUNT          465 a          831 c          824 g          452 t
ORIGIN      
        1 ggctggagcg acaaagccag tgcggtggcg aaaagcatgg ccccaatctc gaagggggtt
       61 gtcatcgtga caagactcgg tctccggctg accactgcga tcgtcatcgg cagcgccgtc
      121 gccagctcgg cctcagccca gaccactcgc tggtcggagc agcaggccaa cgcatggtat
      181 gcagcccagc cgtggctggt ggggagcaac tacgtcccca agtcggcgat caatcagctg
      241 gagatgtggc aggaggccac gttcgatccg gcggagatcg acaaggagct gggctgggcc
      301 gaagagttgg gcatgaacac catgcgggtc tttctgcacg atctcctgtg gcaacaggac
      361 tcggtgggtt tccggaagcg catcgaccag ttcctggtga tcgcatcgcg gcaccacatc
      421 cgtcccgtgt tcgtcctttt cgattccgtc tgggacccct caccccacct cggtccgcaa
      481 catccaccgg tccccggcgt tcacaactcg ggctgggtgc agagtccagc ggtcagcgcg
      541 ctggccgatc cggcacaata tccccggctc cgggactacg tgcagggagt catcggagcg
      601 tacgccggcg atccccgcgt cctggcctgg gacctgtgga acgagcccgg caacgagaat
      661 tccgattcgt acggcaaaga ggagttacgg gacaagcggg aacgcgttgc aatccttctt
      721 cctcaggcct tccaatgggc ccgcgccgcc catccgacgc agcccctcac cagtggcgtg
      781 tgctgtgtcg agtggaatcc ggatggcaga aacctggacc ggatcaggca aatccagctc
      841 cgcgagtcgg acatcatcac cttccacaac tacagctggc cggaatactt ccagcggcag
      901 gtggcgtggc tgaagaagta caaccgtccc gtgatctgca ccgagtacat ggcccggccg
      961 gtggggagca ccttcgacgc gctgttgccg ctggcgaagc agcagcgagt ggggatgatc
     1021 aattggggat tcgtcgcggg gaagacgcag acctatttgc cctgggactc gtggcagcat
     1081 ccctacgtcg tcgccgagcc accggtgtgg tttcacgaag tgcttcgccc cgacgggaca
     1141 ccgtatcgtc aggccgaggt ggatctgatt cgccagctca ccggggtgca gagcgcggat
     1201 gcgaggcgga cgagcctgcg ctaaaggttg ctagactgac cgacgactga agaaagctgc
     1261 ggtgcagtca ccagctatgc accgatgata ccgcgctggg tgcagctccg gagggcacgt
     1321 cagaacgagg tgaggagacc gggcctcagc tgccagggca gtttctcctc tgctagatac
     1381 ggcccgggct ccgagcgtcg agttctgcag tgcccggagg agctgcccca gcgcggtacc
     1441 caagagcacg gcccttcggg cgcagtcgga gatcctttgt tgcgcccagg atcacgacgc
     1501 caggcgggct agtctgtgtt agcggcgctg gtgcctgctc gctccgggcg ctgtagcact
     1561 cgacggtcgg agcccgggca gcacccggat cctgcggagc acgaacctgc aacgcccggt
     1621 ctcctcccct cgtgctaacg cgccctgcgg agcaggtcac cagcgccgac ggccaccatc
     1681 gccatcttga acaggtcttt cggcagttgg tcttcggcgg tcgctgatcc ttatctgacg
     1741 gaattgggct gcgactggcg ttggggtccg aagggcgcgt cagcacgagg ggaggagacc
     1801 ggcgcaatcc cgttctcctg ctgtgagagt tgggcagtcc agcgccgggc tccgaccgtc
     1861 gagtgctgca gcgcccggag gaccccacgc cagtcgcaca aaccccgaat caagatctgc
     1921 aaccctcgag tgccgaagcg cgcaccagtc gcaggaaccc tgaatcaccc ctcgcgagcc
     1981 cggtcaccgc cgggcaccat cccgcgctca ttgatgcccg agcccatcgg ggtagcttgt
     2041 gatgttgctg ctgcgcatct tcgatctcag agttcagagg agccatgtcc gactttcgcg
     2101 ccgagtatct cgccgatatc cagagtcagt tcgccaagct ccggagcacc gcagagcgcg
     2161 ccatggtcca ggtgcctgac gccgactttg ccaccgcgct ggacggcgag aacaacagca
     2221 tcgccatcct gctcaagcat gtgagcggca atctccggtc ccgctgcacc gactttctca
     2281 cctccgacgg cgagaagccc gatcgggacc gtgatgccga gttcgtgctg gattcgcggg
     2341 atacccgggc tgcgttgatg aatgcctggt ctcgcagctg ggatcttctc gcggagacgc
     2401 tacgatcgct gagggccgag gatctcgagc gaaccgtcca tatccgagcg gagccccaca
     2461 ccgtgctgcg agcgctgcag cgccagctcg gccatctcgc gtatcatgtt ggtcagatcg
     2521 ttcttctggc ccggcactgg gtcggtcctc ggtggcagag cctctagagg ct
//
LOCUS       DASRPQ010000032         1269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4078347, whole genome shotgun sequence.
ACCESSION   DASRPQ010000032 DASRPQ010000000
VERSION     DASRPQ010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4078347"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..1138)
                     /locus_tag="VFD73_00370"
     CDS             complement(149..1138)
                     /locus_tag="VFD73_00370"
                     /inference="COORDINATES: protein motif:HMM:NF040183.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI72485.1"
                     /translation="MGTFERFHTGRSPPYDAGGLRPGSRRTTLIGSQVSTSSQEEAPG
                     SGPTVLRILLGAQLRRLREQKGISREDAGWEIRASGSKISRMELGRVSFKERDVSDLL
                     TLYSVTDQKERETLLSLARQANSPGWWHHFGDILPPGFQSFLGLESAATLIRTYEIQF
                     VPGLLQTGDYARAIMLLGHPDEKPDEIDRRVALRLQRQQVLARPDAPQLWAVIDEAVL
                     RRPIGSVEVMKAQIKSLIEASRMPNVRLQIIPFLSGGHAAAGGSFTILRFPEPDLPDV
                     VWVEHLTSSIYLDKREDVDVYAIAMERVCIEAEPPSSTAEILEKLLTEIGRIS"
     gene            complement(1051..>1269)
                     /locus_tag="VFD73_00375"
     CDS             complement(1051..>1269)
                     /locus_tag="VFD73_00375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72486.1"
                     /translation="KAVLFGTLCQEWYVVSAIMLANKCRRKVVCTCIRLVRQPSVSAR
                     WERSSGFIPDDLPRTMLGDCGRAAVVRR"
BASE COUNT          233 a          427 c          390 g          219 t
ORIGIN      
        1 acgacggaga cttcgacaac ctactgaact gatcaaccac atcgcgcgat cttggagttg
       61 tggttggccc aaaccgcgcg aagagcgcat aagggcaacc acaactccaa gatcggcgag
      121 gaatgcagcg accgtcggtt ctcgatgctc agctgatcct gccgatctcg gtcagcagct
      181 tctcgaggat ctcggcggtg ctgctgggcg gctcggcttc gatgcacacc cgttccatcg
      241 cgatggcgta cacatcaacg tcctcgcgct tgtccaggta gatcgagctg gtcagatgct
      301 cgacccagac gacgtccggc aggtcgggct ccgggaaccg caggatcgtg aaagatcctc
      361 ccgcggccgc atgcccgccg gacaagaacg ggatgatctg cagccggacg ttgggcatcc
      421 gggatgcctc gatcagggac ttgatctgcg ccttcatgac ctccacgctg ccgatcggcc
      481 ggcgcagcac cgcctcgtcg atgaccgccc acagctgggg ggcgtccggg cgcgcgagga
      541 cctgctgacg ctgcaaccga agcgccaccc gacggtcgat ctcatccggc ttctcgtccg
      601 gatgcccgag caacatgatc gcccgggcgt aatccccggt ctgcagcagc ccgggcacaa
      661 actggatctc gtacgtacgg atcagtgtgg ccgcgctctc cagaccgagg aacgactgga
      721 agccgggcgg cagaatgtcg ccgaagtggt gccaccagcc ggggctgttc gcctgccgag
      781 cgaggctgag cagcgtctcg cgttctttct gatcggtgac gctgtagagg gtgagcaggt
      841 cggagacgtc ccgctccttg aagctgaccc ggccgagctc cattcggctg atcttcgacc
      901 cggacgcacg gatctcccag ccggcgtcct cccggctgat ccccttctgt tcgcgcagtc
      961 gccgcagctg agctccgagc aggatacgga gcacggtcgg gccgctgccc ggtgcctcct
     1021 cctgcgagct ggtgctcacc tgactcccta tcagcgtcgt acgacggctg cccggccgca
     1081 gtcccccagc atcgtacggg ggagatcgtc cggtatgaaa ccgctcgaac gttcccatcg
     1141 tgccgacacg gaaggctgac gcacaagacg tatgcacgtg cagacgacct tgcgacggca
     1201 cttgttcgcg agcatgatag ccgacaccac ataccactcc tggcacagcg tgccgaaaag
     1261 taccgcttt
//
LOCUS       DASRPQ010000033         1018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4078375, whole genome shotgun sequence.
ACCESSION   DASRPQ010000033 DASRPQ010000000
VERSION     DASRPQ010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4078375"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1003)
                     /locus_tag="VFD73_00380"
     CDS             complement(<1..1003)
                     /locus_tag="VFD73_00380"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HZI72487.1"
                     /translation="MSKRDRTPGIGNMAHYNFGSPTPDLNLLLSSEQYDMPFWKSLLR
                     QVQEKLHPEKLPPLHLTSKPVPVRDIWGAYNYKKRGAIGSTVIHTAVVAGIIAASVLG
                     ARVVKQVEKHETVTLVAPDISDYMPLSNKKNDTIGGGGGGGDRDKIQAPKGRLPKLAM
                     EQITPPAMVIRNEHPKLAVEPTVVVPPQVKLPQIASLNLGDPKAVIPTGPMSNGTGSG
                     GGIGSGSGGGVGSSEGPGVGPGRGGGIGGGVFKVGGGVSAPRALSTPDPEYSEEARKA
                     KYQGTVVLWLIVDQNGHPQQVRVARSLGMGLDQKAIEAVKQWKFEPAMKDGKPVAVQI
                     "
BASE COUNT          176 a          323 c          303 g          216 t
ORIGIN      
        1 tgatctgcac tgcgactggc ttgccgtctt tcatggcagg ctcgaacttc cactgcttca
       61 cggcttcaat ggccttttgg tccaaaccca tgcccaggct gcgggcgacc cgcacctgct
      121 gcggatggcc gttctggtca acgatcagcc agagaacgac ggtgccctgg tacttggctt
      181 tgcgggcttc ctcgctgtac tcggggtctg gcgtcgagag cgctcgcgga gcggacacgc
      241 cgccgccgac cttgaataca ccgccgccga tgccgccgcc acgacccgga cccacgccag
      301 ggccttcgct ggacccaacg ccaccacccg agcctgaacc gatgcctccg ccagagccgg
      361 tgccgttcga catcgggccg gtcggaatca cggccttcgg atcaccgagg ttcagtgaag
      421 caatctgggg cagcttcacc tgaggcggaa ctacaaccgt cggttcaacc gcgagtttgg
      481 ggtgttcgtt acgaatcacc atcgccggag gcgtaatctg ttccatggcc agcttgggga
      541 gacggccttt gggcgcttgg atcttgtcgc gatcgccacc accgccgcca ccgccaatcg
      601 tgtcgttctt tttgttcgac agcggcatgt aatcggagat atctggggcc accagggtaa
      661 cggtctcgtg cttctccacc tgctttacaa ccctggcgcc cagcacggat gcggcgataa
      721 tgccggccac cactgccgtg tgaatcacgg tcgagccgat cgcgccgcgt ttcttatagt
      781 tgtaagcacc ccagatatcc cgcacgggga cgggcttcga ggtcaaatgt agcggtggca
      841 gcttctccgg gtgaagcttt tcttggacct gccgcagcag cgacttccag aacggcatgt
      901 cgtactgttc gctggagagc agcaggttga gatcaggagt tggtgagccg aaattgtaat
      961 gtgccatatt gcctattccg ggtgttcggt ccctcttgct cactccgcgg cgtgcgaa
//
LOCUS       DASRPQ010000034         1437 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1884565, whole genome shotgun sequence.
ACCESSION   DASRPQ010000034 DASRPQ010000000
VERSION     DASRPQ010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1437
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1884565"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..248
                     /locus_tag="VFD73_00385"
     CDS             <1..248
                     /locus_tag="VFD73_00385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72488.1"
                     /translation="AIPFLLFSILGTIVSAASGSMAVAILFVGVVLVYGTEIPTRFGV
                     FRGQRLIGLWQVLTGMWLMYLTYGTVFNIALGRHWWA"
     gene            complement(296..799)
                     /locus_tag="VFD73_00390"
     CDS             complement(296..799)
                     /locus_tag="VFD73_00390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72489.1"
                     /translation="MVWLQGLAVVLPGKEAILAEEIVQRQVGREPVLAVDHDVRRFRQ
                     HLHLAEYRSRRDAFPDVIQLAPARDTVHVGQYLDARQSNELVIIALPRRFDKAPDTER
                     PLGAPVLVCLAQGIEVGIVRDTAGVQDRPLARQNLPRGNAVFPPHIGAGDARCGRAGS
                     VRVGSNL"
     gene            939..>1437
                     /locus_tag="VFD73_00395"
     CDS             939..>1437
                     /locus_tag="VFD73_00395"
                     /inference="COORDINATES: protein motif:HMM:NF017051.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72490.1"
                     /translation="MNVVILGCSYRTAPVGVRERLAFTDEQVGRALDRLSACPGREAV
                     LLSTCNRVELYLGYPGEGKEAGQELTDFLADFHGLPADEIRPHLYAPHHLDAIRHLFR
                     VAASLDSMLVGEGQIAGQVKLAYERARTQGATGPLLNALFPHARRVAKRVRAETGISQ
                     GHVSVP"
BASE COUNT          241 a          475 c          455 g          266 t
ORIGIN      
        1 tggccatccc cttcctgctg ttttccattc tgggcacgat cgtctctgcg gcgtccgggt
       61 ccatggccgt ggcgatcctg ttcgtcggcg tggtcctcgt ttatggcacg gagatcccga
      121 cgcggttcgg cgtctttcgc ggccagcgac tcatcggact gtggcaggtc ctcacgggaa
      181 tgtggttgat gtatctgacc tacggcaccg tattcaatat cgccttgggt aggcattggt
      241 gggcctaaag ggtcaccccg cccgggactg gacaatctcc atgaaagact ctgaatcaca
      301 agttgctccc gacgcgaacg ctcccggctc gcccacacct cgcatcacca gctccgatgt
      361 gcggcgggaa aaccgcattc ccccgaggca agttctgacg cgcaagtggc cggtcttgca
      421 cgccggcagt gtcccggact atgcctactt cgattccctg ggccagacac accaggactg
      481 gcgcgcccag tggacgttcc gtatctgggg ccttgtcgaa gcgccgtggc agtgcaatta
      541 tcacgagttc attgctctgc cgcgcgtcga ggtactggcc gacatgcact gtgtcacgcg
      601 ctggagcaag ctggataacg tctgggaagg cgtctcgacg cgaacggtac tcagcaaggt
      661 gaaggtgttg ccggaagcgg cgtacgtcat ggtccactgc gagcacgggt tcacgaccaa
      721 cttgccgctg gacgatttcc tcggcgagga ttgcctcttt gcctggaagc acaacggcca
      781 gcccctggag ccagaccacg gctatccgct gcgcctggtc gtgccgcggc gttacgcctg
      841 gaaaagcgcc aggtgggtcc cggtttctgg gaggaatggg agcacggggg ctatcacatg
      901 cgcggcgatc cgtggaagga acagagggac cgagcgcgat gaacgtagtg atcttgggtt
      961 gcagttatcg cactgccccc gttggggttc gcgagcggct cgctttcacg gacgagcagg
     1021 tcggccgggc cctcgaccgg ctctcggcct gccccggccg ggaggcggtc ctgctcagca
     1081 cctgcaaccg cgtcgaactg tacctcggct accccggtga aggcaaggag gccggccagg
     1141 agctcacgga cttcctggcg gatttccacg gcctgccggc cgacgagatc cgcccccacc
     1201 tctacgcacc ccaccatctg gacgccatcc ggcacttgtt ccgcgtcgcc gccagtctcg
     1261 acagcatgct cgtcggcgag ggccagatag ccggccaggt caagctggct tacgagcgag
     1321 cccgtaccca aggggccacg ggcccgctgc tcaatgcgct gttcccgcac gcccgccgag
     1381 tggccaagcg cgtccgcgcc gagaccggca tcagccaggg ccacgtcagt gtcccta
//
LOCUS       DASRPQ010000035         1175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2514228, whole genome shotgun sequence.
ACCESSION   DASRPQ010000035 DASRPQ010000000
VERSION     DASRPQ010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2514228"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..608)
                     /locus_tag="VFD73_00400"
     CDS             complement(<1..608)
                     /locus_tag="VFD73_00400"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HZI72491.1"
                     /translation="MGQLMMCLRTLSPPPLTVGILLFCLCACAGNGTQPAPSARDAFA
                     QEEQTRRQGLALRENERQQSRLDDIAYPILSGGTPLCPGARARHLGARLATIQSYRRE
                     LQPAAAQGLELGDTLTVLSVTYGGPAGDGGLRPGDRIVAVDQTPIAPGAGAVDQFSTL
                     VLADQRRSPEVSIALMRDGEPGHATVRLDEVCDYGSEVVESG"
     gene            776..>1175
                     /locus_tag="VFD73_00405"
     CDS             776..>1175
                     /locus_tag="VFD73_00405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72492.1"
                     /translation="MKRFAIPLFTTAGVAALVSCEGQPTQPSTGSSDAPAAMASSLPA
                     FDPDNFVRVVDNRFFPLRPGTRYVYHGVEDGEVETNITIVTHDRKEILGISATVVFDR
                     VFVHGELKEKTFDWYAQDRNGNVWYLGEDTR"
BASE COUNT          218 a          379 c          377 g          201 t
ORIGIN      
        1 tcgccgctct caacgacctc gctgccataa tcgcagacct cgtccagtcg caccgtggcg
       61 tgccccggct cgccatctcg catcagcgcg atcgagacct cgggactcct cctctggtcg
      121 gccaaaacca gggtgctgaa ctggtcgacc gcgcctgcgc caggtgcaat cggagtctgg
      181 tccacggcga cgatgcgatc gcccggtctc agacccccat cccccgccgg accgccatag
      241 gtgacactca ggacggtgag ggtgtcaccc agctccagac cctgggcggc agcaggttga
      301 agctcgcgcc ggtagctctg gatggtggcg aggcgggcgc ccaggtgccg ggcccgggca
      361 ccggggcaga gcggcgttcc gcccgagagg atcggatacg cgatgtcatc cagccggctc
      421 tgctgtcgct cgttttccct gagggccagg ccttgccgcc tggtttgctc ctcctgggcg
      481 aaagcgtcac gcgccgaggg agcgggttgg gtgccatttc ctgcacaggc gcagagacag
      541 aacaggagta tgccgacggt taaaggcggc ggagatagcg tgcggaggca catcatcagc
      601 tggcccacgg gggactggac tcggaggttg tgaacgcgtg gctaccccca tagtacgtcg
      661 gtgaaccgac ccccgccaga cgtatggtcg cccattttgc acctttgatc ttccctgtgg
      721 cccgccctgg gcgcattctc cggaaggcct gcaatacagt caccaggagg tcgatatgaa
      781 acggttcgcc atacctctat tcacgaccgc cggagtggcc gcactggtga gctgcgaagg
      841 acagcccacc cagccgtcga ccggctccag cgacgctccg gcggccatgg ctagctccct
      901 acccgcattc gacccggaca actttgtccg agtggtcgac aaccggttct ttccgctccg
      961 gcccggaacc cggtacgtct accatggagt cgaggatgga gaagtggaga cgaacatcac
     1021 tatcgtgacg catgaccgga aagagatcct gggaatcagc gcgacggtgg tcttcgaccg
     1081 ggtcttcgtc catggcgagt tgaaggagaa gacgttcgac tggtacgccc aggaccgaaa
     1141 cggaaacgtc tggtatctgg gagaggacac cagag
//
LOCUS       DASRPQ010000036         7696 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_631676, whole genome shotgun sequence.
ACCESSION   DASRPQ010000036 DASRPQ010000000
VERSION     DASRPQ010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7696
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_631676"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..881)
                     /locus_tag="VFD73_00410"
     CDS             complement(<1..881)
                     /locus_tag="VFD73_00410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72493.1"
                     /translation="MRRSAVFFIAAGAFLVSCSDSTGPGNTLDCTAASTHALAVGDHQ
                     IIDPTQQGACVRLPAAGAQGAVHLYVPLATAGNETTNGVSSPYIVSSGAGATASAPAL
                     RSPLLSAFRGRVPAGAFHMMLRERERALAADPSRALFSLAGQPHAAAVPPVFGEHRTF
                     NVCASATCTSFVQRSATAQSIGQRVAIFVDDSAPAGGYTPTDLDQVRTRFDQYLYPID
                     TTAFGRESDVDSNGVVIVLLTPQVNALSPGCNQTGQIILGFFFGADLLPKSPDNPGSN
                     EAEIFYGLVPDPTNTTCT"
     gene            1147..4674
                     /gene="dnaE"
                     /locus_tag="VFD73_00415"
     CDS             1147..4674
                     /gene="dnaE"
                     /locus_tag="VFD73_00415"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF004226.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HZI72494.1"
                     /translation="MSFVHLHTHSEYSLLDGANRIPELVAHVKKLGMDSLAVTDHGNL
                     HGAWAFYEQARAQQIRPILGFEAYLAFGSRTLREKPAWAPAPYSHLVLLARNRTGYHN
                     LVRLTSIGFVEGFYRRPRIDKDVLAAHSEGLVCLAACLSGEVALYLRHGKYEEARRSA
                     EWFSQTFGPEGFWLEIQQHGIPEERQVTEGMLRLGRELGIGVVATNDAHYLRREDAES
                     HDVLLAIGTGSDLDDPKRFRFLGQESYVKSEPEMRALFPDHPETLDNTARVAELCEFD
                     FEKRYFLPTFPRPAEYPSDEALLDHLATTGAERRYGSPLPPEVQDRLAYELGVIEKAG
                     YAGYFLIVQDFIAAARERGIPVGPGRGSAAGSLVAYSLGITDVCPLKFDLLFERFLNP
                     ERVSMPDIDVDFCFERRGEVIEYVRERYGRESVGQIVTFGTMKARAAVKDVARVLRIP
                     PGEADRITKLIPSGPAYSLNIRDAEKKIDELRELVRSNPQYRRLVDLSSRIEGISRHM
                     SVHAAGVVIAPGPLADYVPVCTAPTKGAGAAADGEESIITQYEMGALEKVGMLKMDLL
                     GLKTLTVIHDTVAMLQERHGTAPDMNALAQDDPAVYELLRQGRTAGVFQFESPLATDT
                     LRAMRCDRFDDLVASNALLRPGPLDAGMHTVFVRRKLGLEKVTYPHPLLTEILEPTYG
                     VITYQEQVMRIANVLGGFSLAEADVLRKAVGKKDQELANKEVARFVERAVANGHSRSM
                     VEELGRQIVTFGRYGFNKSHSVAYSILSYQTAWLKAHHPAEFMAALLSSEIGNTDKVV
                     QYINEARELGLEILPPDVNESGFKFTVVGERRIRFGLGAVRNVGEGAIASIIAGRERG
                     PYASVADLVTRIDLRLCNKRVLESLVAAGACDSLGGHRKQLIESLEPALAEAQLLQAE
                     REAGQGSLFGDGRMLGSENGGSPVTAVSASSAHAARPYPDIPPWTEAERLAKEKEVLG
                     FFISGHPLERFRDEVELFGTRTTATLDRWSEHPVSVAAVVTAVKRQISKKTGKEYARL
                     VLEDFHGTAEAIVFPEAWAKLNQVILPDSALLLSGGYSERDRGEDQAPFIVEGARPLE
                     ELKTSGALALSLQWKAPAAPQPDALKEVVALCSAHPGPVPLYIEWSDGNGEAVRLRSR
                     RIRVAAEDDLVRALRTLLGTGSVHYVKAG"
     gene            4679..5641
                     /locus_tag="VFD73_00420"
     CDS             4679..5641
                     /locus_tag="VFD73_00420"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HZI72495.1"
                     /translation="MASAYTLDFEKPLLELERQIDDLKRIGSERQIDIEGELQGLTGK
                     LESLRAEIYRNLTPLQRVMVARHPRRPYTLDYLSTIFTDFIELHGDRLYMDDPAIVGG
                     WARLSGISVMVVGHQKGRDTKDNLKRNFGMPHPEGYRKALRLMKLAAKFNAPVITLID
                     TPGAYPGLGAEERGQSEALARNILEMSSLPTAIIAVVIGEGGSGGALALGVADRVLML
                     ENSVYSVISPEGCAAILWKDASQRERAAEALKITAEDLLRLNVIDEVIKEPVGGAHVD
                     PDGAGEALREALIRHLTELRKMKPEKLVRRRAEKYAAMGAFTEA"
     gene            5641..6567
                     /gene="ricT"
                     /locus_tag="VFD73_00425"
     CDS             5641..6567
                     /gene="ricT"
                     /locus_tag="VFD73_00425"
                     /inference="COORDINATES: protein motif:HMM:NF041131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory iron-sulfur-containing complex
                     subunit RicT"
                     /protein_id="HZI72496.1"
                     /translation="MTQTVEVRFKGTRKAYFLWPDDSDPLRVTECVVVEVERGRDLGR
                     ITAVGDVATKKCGGCTSCAVGEAAAEPVELKAVLRRATEDDLKLHQEIRLSEEDVRQK
                     VIQRVRAHELLMKVSDTEWQWDRNKLTIYFTADKRVDFRALVRDLASLFRTRIELRQI
                     GVRDEAARLSGVGRCGREYCCSTWLKELSPVNLGLAKDQHLSLNPSQISGGCGRLLCC
                     LKYEHEFYVAARKRFPKEGKTLKTAVGPEKVIAVDIFRERVFLRHQEHGSRIIPLAQL
                     RSELDQLGEVFPTAEPRSRRGRSGNPESGTRN"
     gene            6665..>7696
                     /locus_tag="VFD73_00430"
     CDS             6665..>7696
                     /locus_tag="VFD73_00430"
                     /inference="COORDINATES: protein motif:HMM:NF020892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HZI72497.1"
                     /translation="MSKFFLTTAIDYSNGDPHLGHALEKVGADCIARYRRLRGDQVHF
                     LMGMDEHSQSVLQAAARAGTDPQQWVDRMARRFEEFWERLECSNDDWIRTTEPRHARS
                     VTELLRRIQRLHPDDLYVAEYEGLYCTGCEEFKQESQIVDGHCIEHPTLELIRTRERN
                     HFFRLSRYRDAVLELITSGKFLVEPGIRRNEVLRLLEGGLQDISVSRLRQPWGIPFPG
                     DPEQTVYVWFDALINYLSATGFPDPGYERLWPADLHVIGKGITRFHCVIWPAMLLSAE
                     LPVPREVWAHGYVQWEGAKMSKTSGTAVTLDEAIDRHGPDALRYFLLREVGFEADGNF
                     SWERFDERYT"
BASE COUNT         1430 a         2418 c         2481 g         1367 t
ORIGIN      
        1 gtgcaggtgg tgttggtcgg atcgggaacc agtccgtaaa agatctcagc ctcgttggag
       61 ccgggattgt ccggcgattt gggaaggaga tcggccccga aaaaaaagcc caggatgatc
      121 tgaccggtct ggttgcagcc cgggctcagc gcattcacct gaggcgtcaa caggacgata
      181 acaaccccgt tgctgtcgac gtcagactcc cggccgaatg ctgtggtatc gatgggatac
      241 agatactgat cgaagcgagt ccggacctga tccagatcag tcggggtata cccgcccgcg
      301 ggagcgctgt cgtcaacgaa gatcgctacc cgctggccga tcgactgagc cgttgcgctc
      361 cgctggacga aactggtgca cgtagcagac gcgcagacgt tgaaggtgcg gtgctccccg
      421 aacaccggag gcaccgccgc cgcatggggc tgccccgcca gactaaacaa cgcgcgggag
      481 ggatctgccg ccagagcgcg ctcccgctcg cggagcatca tgtgaaatgc cccggccggg
      541 acccgcccac gaaacgccga caacagggga gaacggagtg ccggcgcgga cgccgtagcg
      601 cctgcaccac tggagactat atagggggac gagaccccgt ttgtggtctc atttccggcg
      661 gtggccagcg gaacgtacag gtgcaccgcg ccctgggctc ctgcggcggg cagccggacg
      721 cacgcgcctt gctgggtcgg atcgatgatc tggtggtcac ccactgccaa cgcatgggtg
      781 ctcgcggccg tgcaatccaa cgtattgccc gggccggtgc tatcactaca actgaccagg
      841 aaggctcctg ccgcgatgaa aaatacggcc gatcgtcgca ctgggtgaac actccgggtg
      901 tgatggggga agccacggga agaagaccca tcggatatcc caaaataagg cgcggcaacg
      961 gcttttgaca atctcactga ctgccggtac cttcactccg tgtcccagaa caatcggctg
     1021 tcgtcggtct ggtcggcgct gagggtctgg tgtcgggcgt gacccaggag agccgttccg
     1081 gcgagagatc gttctgtcgc caagtcagcc gggagtagcg cggctgtact ctctctaccg
     1141 gttataatgt ctttcgtcca tctccacacg cacagcgaat attccctgct cgacggggcc
     1201 aaccggatcc cggagctggt cgcgcacgtc aagaagttgg gtatggacag cctggcggtg
     1261 accgaccacg gcaacctgca cggggcgtgg gccttctatg agcaggcgcg tgcgcagcag
     1321 atccgtccaa ttctcggttt cgaggcatac ctcgccttcg gatcccgcac cctccgagaa
     1381 aagcccgcct gggcacccgc gccgtatagt cacctcgtgc tcctggcccg gaaccggacc
     1441 ggctaccaca acctggtccg gctgacctcg atcggctttg tcgagggatt ctatcgccgg
     1501 ccgcgcattg acaaggacgt cctggccgcg cactccgaag gcctggtctg tctcgccgcc
     1561 tgcctctccg gtgaagtcgc cctttacctc cgccacggca agtacgaaga ggcgcggcgg
     1621 agcgccgaat ggttcagcca gacgtttgga cccgagggct tctggctcga gatccagcag
     1681 cacggcattc ccgaggaacg gcaggtgacg gaaggaatgt tgcgcttggg acgcgagctt
     1741 gggatcggag tggtcgcgac caacgacgca cattatctcc gccgggaaga cgccgagtcg
     1801 cacgatgttc tgctcgcgat cggcaccggc agcgacctgg acgatcccaa gcggttccgc
     1861 ttcctgggac aggagtccta cgtcaagtcg gagccggaga tgcgggcgct ctttccggac
     1921 cacccggaaa ccctggacaa taccgcgcgg gtggcggagc tctgcgagtt cgacttcgag
     1981 aagcggtatt tcctgccgac cttcccccgc cccgccgagt atcccagcga tgaagcgctc
     2041 ctcgaccacc tcgcgacaac tggtgccgag cgccgctacg ggtccccctt gcctcctgag
     2101 gtccaggatc gactcgcgta tgagctgggc gtcatcgaga aggcaggcta cgccggctat
     2161 tttctgatcg tccaggactt catcgccgca gcccgggagc gagggattcc cgtcggtccc
     2221 ggccgaggct ccgccgcggg ctcactggta gcctactcgc tcggcatcac cgacgtgtgt
     2281 cccttgaagt tcgatctgct gttcgagcgg ttcctcaatc ccgagcgcgt gtccatgcct
     2341 gatatcgacg tggacttctg tttcgagcgg cggggtgagg tgatcgagta cgttcgagag
     2401 cgctacggcc gtgaaagcgt aggacagatc gtcaccttcg gcaccatgaa ggcccgggcc
     2461 gcggtaaagg acgttgcccg ggtgctgcga attccccccg gtgaagccga tcgcatcacc
     2521 aagctgatcc cctccggtcc cgcatacagt ctgaacatcc gtgatgccga gaaaaagatc
     2581 gacgagctcc gcgagttggt gcggagcaac ccccagtatc gccgcctggt cgacctgagc
     2641 tctcggatcg aaggaatttc ccggcatatg tcggtccacg cggccggcgt ggtgatcgcg
     2701 ccgggcccgc tggcggacta tgtcccggtg tgcaccgccc ccaccaaagg ggccggcgca
     2761 gcggccgacg gggaggagtc catcattacg cagtacgaga tgggcgccct ggaaaaagtg
     2821 ggcatgctca agatggacct gctcggcctg aagacgctga cggtaattca cgacaccgtc
     2881 gccatgctcc aggagcggca tggcaccgca ccggacatga atgcgctcgc gcaggacgat
     2941 ccggcggtgt acgagctgct ccggcagggc cgcaccgcgg gcgtcttcca gttcgagtct
     3001 ccactcgcca ccgacacgct ccgcgcgatg cgctgcgacc gcttcgacga tctggtcgcc
     3061 agcaacgcgc tgctccgccc ggggccgctc gatgctggaa tgcacaccgt ctttgtcagg
     3121 aggaaactgg ggctcgagaa ggtgacgtac ccccatccgc tcctgaccga aattctggag
     3181 cccacgtacg gcgtgatcac ctatcaagag caggtgatgc ggatcgccaa cgtgctgggc
     3241 ggcttttctc tggcagaagc cgacgtgctc cggaaggcgg tgggcaagaa ggatcaggag
     3301 ttggccaaca aggaggtcgc ccgcttcgtc gagcgcgcgg tggccaatgg gcattcgcgg
     3361 tcgatggtcg aggagcttgg acgccagatc gtcaccttcg ggcgctacgg attcaacaag
     3421 tcacactctg tcgcctactc gattctttcg tatcaaaccg cctggctcaa ggctcatcat
     3481 cctgccgagt tcatggcggc actgctctcc tccgagatcg gcaataccga taaggtggtg
     3541 caatacatca acgaggcccg cgagcttggc ctcgagatcc tgcctccgga tgtgaacgag
     3601 tccggcttca aattcaccgt cgttggtgag cgcaggattc gcttcggcct cggcgcggtg
     3661 cggaacgtcg gtgaaggtgc catcgcatcg atcattgccg gccgcgagcg cgggccctat
     3721 gcctcggtgg ccgatctggt caccaggatc gacctccgcc tctgcaacaa gagggtcctc
     3781 gaatccctcg ttgcggctgg cgcgtgcgac agcctcggag ggcaccgcaa gcagctcatc
     3841 gagtcgctgg agcccgcgtt ggccgaagcg cagttgctgc aggcggagcg cgaggcagga
     3901 caggggtccc tcttcggtga cggtcgcatg ctgggcagcg agaacggtgg cagtcctgtc
     3961 accgccgttt ccgcatcgtc cgctcacgcc gctcgcccct accccgacat tccgccctgg
     4021 accgaagccg agcgcctggc caaggagaag gaggtgctgg gattcttcat ctcagggcac
     4081 ccgctggagc ggtttcggga cgaagtcgag ttgttcggca cccgcaccac ggccacactg
     4141 gatcgctgga gcgagcaccc ggtcagcgtg gccgcggtgg tcaccgcggt caaacggcag
     4201 atctcgaaga agacggggaa ggagtatgcc cggctggtgc tggaagactt ccacggaacc
     4261 gccgaggcga tcgtctttcc agaggcctgg gccaagctca accaggtgat cctgcccgat
     4321 tctgcgctgc tgctttcggg aggatacagt gagcgcgacc ggggagagga tcaggcgccg
     4381 ttcatcgtgg agggagcgcg cccgctggaa gagctgaaga cgtcaggagc actcgcgctc
     4441 agcctgcagt ggaaggcacc cgcggctccc cagcccgatg ccctcaagga agtcgtcgcg
     4501 ctctgttccg ctcatcccgg gccggttccg ctgtacatcg agtggagcga tggcaacggt
     4561 gaagcggtgc gtttacggtc ccgccggatc cgcgtggccg cggaagacga tctggtccgc
     4621 gcgctgcgta cgctgctggg cacgggctcg gtccactacg tgaaggcggg ctgagtcgat
     4681 ggcctctgcc tacacgctcg atttcgaaaa acctttgctg gagctggagc gccagatcga
     4741 tgatctcaag cgcatcggca gcgagcggca aatcgacatc gagggtgagc tccagggcct
     4801 gaccgggaag ctggagtcgc tgcgggccga gatctatcgc aacctgactc cacttcaacg
     4861 cgtcatggta gcacgccatc cccgacggcc ctacaccctc gattacctga gcaccatctt
     4921 caccgatttc atcgagctgc acggcgaccg attgtacatg gacgaccctg ccatcgtggg
     4981 cggctgggct cggttgagcg ggatttccgt catggtagtg ggacatcaga aggggcgcga
     5041 caccaaggac aacctgaagc gcaatttcgg tatgcctcat ccagagggct accgcaaggc
     5101 actccggctg atgaaactgg cggccaagtt caacgctcct gtcatcactc tgatcgacac
     5161 gccgggcgcc tatcctggcc tgggagcgga agagcgcggc cagtccgaag ctctggcgcg
     5221 aaatattctc gagatgtctt ccctgccaac cgccatcatc gccgtggtca tcggtgaggg
     5281 cggctccggc ggtgcgctgg cgctgggagt ggccgaccgg gtgctcatgc tggaaaattc
     5341 ggtctactcg gtgatctcgc ctgaaggctg cgccgccatt ctgtggaagg atgccagcca
     5401 acgcgagcgc gccgcggagg cgctcaagat cactgctgag gatctgctgc ggctgaacgt
     5461 gatcgacgag gtgatcaagg agccggtggg cggagcgcat gttgatcccg atggcgccgg
     5521 cgaggcgctt cgggaagcat tgatccggca tttgaccgaa cttcgcaaga tgaagcccga
     5581 gaaactggtt cgccgccggg cggagaagta cgccgccatg ggcgcgttca ctgaggcgta
     5641 atgactcaga ccgtcgaagt ccgcttcaag gggacccgca aagcctactt cctgtggcct
     5701 gacgactccg acccgctgcg ggtcacggag tgcgtggtgg tcgaggtgga gcgcggccgc
     5761 gacctggggc ggatcaccgc ggtgggagac gtggccacca agaaatgcgg cggctgcacg
     5821 agttgcgcgg taggagaggc cgcggccgag ccggtcgagc tcaaggcggt cctgcgtcgt
     5881 gccaccgagg acgacctgaa gctgcaccag gaaatccgcc tctccgaaga ggatgtccga
     5941 caaaaggtga tccagcgggt ccgggcccac gagctgctga tgaaggtgag tgataccgaa
     6001 tggcagtggg accgcaacaa gctgaccatc tactttaccg ccgacaaacg agtcgacttc
     6061 cgcgcgttag tccgcgatct ggcctctctc tttcggacca ggatcgagct ccgtcagatc
     6121 ggcgtccgcg atgaggcagc ccggctctcc ggggtgggtc gctgcggacg ggagtactgc
     6181 tgctccacct ggctcaaaga gctttcgccg gtgaatctgg gcctggccaa ggaccagcat
     6241 ctttcgctca atccttccca gatctccggc gggtgcggcc gattactctg ctgcctcaag
     6301 tacgagcacg agttctacgt tgccgcgcgc aagcgattcc ccaaggaagg caagacgctc
     6361 aagaccgcgg ttggaccgga gaaagtcatc gccgtggaca tcttccggga acgggtcttc
     6421 ttgaggcacc aggaacacgg gtcgcgtatc atcccccttg ctcagctccg gagcgagctc
     6481 gaccagctag gtgaggtctt tcccaccgca gagccccgga gccggcgagg gcgctcgggg
     6541 aaccccgaat caggcacccg gaactagcaa agccccgttg cggttttata ctccgaacgc
     6601 agcgaagccg cagatcgaga gatctgcggc taacgttttg tccgtccttt cgtcaggagc
     6661 ccgggtgtcg aagttctttc tcaccaccgc aatcgattat tccaacgggg atcctcacct
     6721 ggggcacgcg ctggagaagg tcggcgcgga ttgcatcgcc cgctatcgcc ggctccgcgg
     6781 agatcaggtc catttcctca tgggcatgga cgagcacagc cagtcggtgc tccaggcggc
     6841 ggcacgggcg gggacggatc cccagcaatg ggtcgatcgg atggcgcgcc gcttcgagga
     6901 gttctgggag cgtctggagt gcagcaacga cgattggatc cggaccaccg agcctcgcca
     6961 cgcccggtcg gtcaccgagt tgttgcgccg aatccagcgg ctgcacccgg acgatctcta
     7021 tgtcgcggag tacgaaggac tctactgtac cggctgcgag gagttcaaac aggaaagcca
     7081 gatcgtcgac ggacactgta tcgagcaccc gacgctcgag ctgattcgca cccgggaacg
     7141 gaatcacttc ttccggctga gtcgctatcg ggacgcggtg ctcgagctga tcacctccgg
     7201 aaaatttctg gtcgagcccg gcatccggcg caacgaagtc ttgcggctgc tcgaaggcgg
     7261 cttgcaggac atctccgttt cccgtcttcg gcagccatgg ggaattcctt tccccggcga
     7321 tccggagcag accgtctacg tctggttcga tgccctcatc aattatctct cggccaccgg
     7381 ctttcccgat ccgggatacg agcgcctctg gcccgccgat cttcatgtga tcgggaaagg
     7441 catcactcgg tttcactgcg tgatctggcc cgcgatgctc cttagtgcgg agctgccggt
     7501 cccccgcgag gtctgggcgc acggttacgt ccaatgggaa ggcgccaaga tgtccaagac
     7561 cagtggcacc gccgtcacct tggacgaagc gatcgaccgc cacgggcccg acgcattgcg
     7621 ctacttcctg ctgcgtgagg tcgggttcga ggccgacggc aatttcagct gggagcgatt
     7681 cgatgagcga tacacc
//
LOCUS       DASRPQ010000037         1325 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_944073, whole genome shotgun sequence.
ACCESSION   DASRPQ010000037 DASRPQ010000000
VERSION     DASRPQ010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1325
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_944073"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            71..550
                     /locus_tag="VFD73_00435"
     CDS             71..550
                     /locus_tag="VFD73_00435"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HZI72498.1"
                     /translation="MTGSKVSPNRSSTDRIEKSVILRAPRSRVWRALTDPAQFGEWFG
                     ARLSGTFTPGQRMRGQITIPGYDHLAFDVLVDRMEPERLFSYRWQPGGDPDKDPAEPM
                     TLVVFELEDVPEGTRLTVTESGFDQIAPARRSKAFRENEQGWAGQLENISRYLAKPR"
     gene            534..863
                     /locus_tag="VFD73_00440"
     CDS             534..863
                     /locus_tag="VFD73_00440"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HZI72499.1"
                     /translation="MPSRGRAPSRASVFAALGDETRLQLIARLSSQGPASISTLTAGS
                     GVTRQAVAKHLRVLAAAGLVRGARQGRQSMWRLERRQLEEARRSLAQISRQWDQALDK
                     LKLFVER"
     gene            complement(865..>1325)
                     /locus_tag="VFD73_00445"
     CDS             complement(865..>1325)
                     /locus_tag="VFD73_00445"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZI72500.1"
                     /translation="TYLVADIYNDDYILSEYKRLNFPDKILAKEREVGKAQRENFRRA
                     VRAGVKIAFGTDAGVYPHGLNARQFAVMVRYGLTPMQAIQSATTSAADLLGWSDRVGS
                     VTPGKYADLVAVDGDPLADITLLERVNFVMKGGVVYKSNGQTGAARTSAR"
BASE COUNT          230 a          414 c          435 g          246 t
ORIGIN      
        1 atcaggcgca accgaacggt tgcgcttttt cagatttgcc ctagattgac aggcaaccag
       61 gaggttgctc atgaccggca gcaaagtctc acccaatcgt tccagcaccg atcggatcga
      121 gaaaagcgtc atcctgcggg cacccaggtc cagggtctgg cgagcattga ccgaccccgc
      181 gcagttcggg gaatggttcg gtgctcgact gagcggcacg ttcacgcctg ggcagcggat
      241 gcggggacag atcaccattc ccggctacga ccatcttgcc ttcgacgttc tggtcgaccg
      301 gatggagccg gagcggctgt tctcctaccg ctggcagccg ggtggagacc ctgacaagga
      361 tcctgccgaa ccgatgacgc tggtggtgtt cgagttggag gatgttccgg agggcactcg
      421 cctgacggtg accgagtcag gcttcgacca gattgcaccg gctcggcgga gcaaggcgtt
      481 ccgggaaaac gagcaggggt gggctggtca gctggagaat atctcccggt accttgccaa
      541 gccgaggtag agctcctagc cgggcctcgg tcttcgcggc gttgggcgat gagacgcggc
      601 ttcagctcat cgcccggctc tcgagccagg gaccggcgtc gatcagtacg ctcaccgccg
      661 gctccggagt gacccgccag gcggtcgcca aacacctcag agtgctggcg gctgcaggcc
      721 tggtccgcgg cgcacgccag gggcgccaga gtatgtggcg actggagcgg cgccagctcg
      781 aggaggctcg ccgctcgctc gctcagatct cccggcagtg ggaccaggcg ctcgacaagc
      841 tcaagctgtt cgtggagcgc tagtctatcg ggcgctggtc ctcgccgctc cggtctgtcc
      901 gttggatttg tacacgactc cgcccttcat cacgaaattc actcgctcca gcaaggtgat
      961 gtcggctaaa gggtcgccgt ccaccgccac cagatcggca tacttgcccg gcgtgacact
     1021 gcccacccgg tcagaccagc ccagaaggtc ggcggcactg gtcgtggcgg actggatcgc
     1081 ctgcattggc gtcagtccgt agcgtaccat caccgcgaac tgccgagcat tcagcccgtg
     1141 agggtagacg ccggcatcgg tgccgaaggc gatctttacg ccggcccgta ccgcgcgacg
     1201 gaagttctct cgctgggcct tgccgacctc acgctctttg gccaggatct tgtcggggaa
     1261 gttgagccgc ttgtactcgc tcaggatgta gtcgtcgttg tagatgtcgg cgacgagata
     1321 ggtgc
//
LOCUS       DASRPQ010000038         3512 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_944294, whole genome shotgun sequence.
ACCESSION   DASRPQ010000038 DASRPQ010000000
VERSION     DASRPQ010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3512
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_944294"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            292..765
                     /locus_tag="VFD73_00450"
     CDS             292..765
                     /locus_tag="VFD73_00450"
                     /inference="COORDINATES: protein motif:HMM:NF024937.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4126 family protein"
                     /protein_id="HZI72501.1"
                     /translation="MLILFLAIGFVTGLRSLTGVAAVSWAAYLGWIDLRDSTFRWLSS
                     GVAVAVFTIAALAELVADKLPRTPKRTAPGSLVGRFVLGGIAAAALAASIGESLLVGA
                     LLGGIGAVIGSFAGYETRRRLVRVFGGKDLPVAVIEDLVTIALAYLVVSGVHSPP"
     gene            746..3508
                     /locus_tag="VFD73_00455"
     CDS             746..3508
                     /locus_tag="VFD73_00455"
                     /inference="COORDINATES: protein motif:HMM:NF015644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HZI72502.1"
                     /translation="MSTRLPRQVSTMSLRRWLIFLIVLFFAGTFFIPTLLGILVDWWW
                     YQEIGYQVVFSREVLTELLLFLIVGSLTFGFFYFNLRLAQRGLVPYPVVLRFAQAAPR
                     VDITRPLRRLTLPVSVVFGVLAGLAATPAWATLLRSMYATPFGIRDPIFGRDIGFYVF
                     QLPALSALLGYLSVLLLLTLIALVPVYALRGDIQIVPGAGRRPRLRVEPSASLHMGSI
                     LATLFLITALRLWLVDIPNLLYSTTGPLVGASYTDIHASLPALYVSAAVAVIAAVAVL
                     IGAIRRELGRAAVLAIAGYWVIAIVGRGFFPGLVQKFIVAPTELTRETPYLRYHIAAT
                     RQAWGLDSVETRELGGGPALTLADIKANATTIDNVRLWDRDPLLQTFGQLQEIRTYYD
                     FVSVDDDRYWIDGKYRQVLLSPRELNARSLPTRTFINEHLTFTHGMGLTLSPVNQVTT
                     EGLPVLFIKDLPPSSSISIGIKRPQIYFGELSNDYVFTGTRQREFDHPSGEQNVYASY
                     AGKAGVSIGNVLRRTVFASQFGSSKILFSGDITDQSKILYYRNIMERASKALPFLTFD
                     RDPYLVIAADGTLKWILDAYTSTGHYPYAERLRDGTSYMRNAVKLVIDAYDGTLTAYV
                     SAPSDPLIRTWSRIFPGIFVSMDKLPDDLRAHIRYPDGIYRIQTNLYTTYHMDDPEDF
                     YHREDQWQIPTAAESEGKVPFMRHLVMRLPEEKNAEYIYMVPFTPRGKDNLAAWMVAR
                     NDGAEYGRLRVYRLSRQTLAFGPQQIVNRINQNTEISSQLTLWDQRGSQVIRGDLLVI
                     PIEEALLYVQPIYLQAQGGRIPELKRVVAAYQNRVVMRETLDAALAELFGGPQARPAP
                     EPEIVADSTASSGLVTRDSRVSTLLQQARQHYQTAIQAQRELDWARYGEEMRRLGEVL
                     DQLGRR"
BASE COUNT          605 a         1128 c         1057 g          722 t
ORIGIN      
        1 gacctccgcg gtatcgagaa aagtgcaccc cagctccagg gagcgatgaa tcgtggcaat
       61 cgattcccgc tcgtcccgct cctccgccgc cccatacgac tgactcattc ccatgcaacc
      121 gagtccgagg gctgagacgg agaggccttg gtttccgagt ttgcgttgtg gcaacatggt
      181 cctgattccc tcgttcagag attcccgcct tccatcccta caacctaacc tgaagaacga
      241 cgccaggtcc tctgctctag cccccgggcc ccgtctactt agaatcattg catgctgatc
      301 ctcttccttg cgatcggatt cgtcacggga ctgcgttccc tgaccggcgt tgcagcggtg
      361 agctgggccg catacctggg gtggatcgac ctccgagact ccaccttccg ttggctgagc
      421 tccggcgtag cggtcgcggt gttcaccatc gccgcactgg cagagctggt ggcggacaag
      481 ctgccgcgca cgccgaagcg gaccgcaccg ggctcgctcg tcggacgatt cgtcctgggt
      541 ggaatagccg ccgcggctct tgccgcctcg attggagagt cgctgctggt tggggcgttg
      601 ctcggcggaa tcggggcggt gatcggctcg tttgcagggt atgaaacccg gcggcgactg
      661 gtcagagttt tcggagggaa agacttgccg gttgctgtga tcgaagacct ggtgacgatc
      721 gcgttggcct atctggtggt cagcggtgtc cactcgcctc cctagacagg taagtaccat
      781 gtcgctccgg cgctggctga tcttcctgat cgttctgttc tttgccggaa cgttcttcat
      841 tccgacgctg ctcgggattc tggtggactg gtggtggtac caggagatcg ggtatcaggt
      901 ggtgttcagc cgggaagtgc tcactgagct cctgctcttc ctcattgttg gcagcctcac
      961 cttcggtttc ttctacttca acctgcgtct cgctcagcgt ggattggtgc cctacccggt
     1021 ggtgctccga tttgctcagg cggctccccg ggtggacatc acccgcccgc tccgccggct
     1081 gacgcttccg gtgtcggtgg tcttcggcgt actcgctggt ttagcggcca ctcccgcatg
     1141 ggcgacattg ctgcgctcga tgtacgcgac tccgttcggt atccgcgatc ccatcttcgg
     1201 gcgagatatc ggcttctatg tcttccagct gccggcgctc agtgcccttc tcgggtacct
     1261 atccgtactg ctgcttctca ccctgatcgc gctggtcccg gtgtatgcct tgcggggcga
     1321 catccagatc gttcccggtg ctggccgcag gccgagactc cgggtggagc cctccgcatc
     1381 gctgcacatg ggatccattc tcgcgaccct gtttctgatc actgcgcttc gcttgtggct
     1441 ggtggacatt cccaacctgc tgtactccac caccggccca ctggtcgggg ccagctacac
     1501 cgatatccac gccagcctgc ctgcactgta cgtctccgcc gcggtggcgg tcatagcagc
     1561 ggtggctgtt ctcattggcg cgatccgccg ggaactgggt cgtgccgccg tgctcgccat
     1621 tgccggctac tgggtgattg cgatcgtggg aaggggattc tttcccgggc tggtgcaaaa
     1681 attcatcgtt gcaccaactg agctgacccg tgagacgccc tatttgcgct atcacatcgc
     1741 cgctacccgg caggcgtggg gactggatag cgtggagact cgggagctgg gcggcgggcc
     1801 cgccctcacc ctggccgata tcaaagccaa tgcgaccacg atcgacaacg tgcggctctg
     1861 ggatcgggac ccgctgctgc agacgttcgg ccagctgcag gagatccgga cctactatga
     1921 cttcgtatcg gtggacgatg accgctactg gatcgatggc aagtaccgcc aggtgctgct
     1981 ctcaccgcgc gagttgaacg cgcgttcgct tccgacccgg acgttcatca acgagcacct
     2041 cacctttacc cacgggatgg ggctcaccct gagcccggtg aatcaggtga ccaccgaagg
     2101 tcttccggta ctcttcatca aggacctgcc gccgtcgagc tctatctcga ttgggatcaa
     2161 gcgtccgcag atctacttcg gcgagctgtc caacgactac gtgttcaccg gcacccgcca
     2221 gcgggagttc gaccacccct ccggcgagca gaacgtgtac gcatcgtacg ccgggaaggc
     2281 tggagtctcc atcggaaatg tgcttcggcg gacggtcttt gcctcccagt tcggctcgtc
     2341 caagattctc ttctccggcg acatcaccga ccagagcaag atcctgtatt accgaaacat
     2401 catggagcgg gccagcaagg cgctcccctt tcttaccttc gatcgggatc cctatctggt
     2461 gatcgccgcc gacggcaccc tcaagtggat cctcgacgcg tacaccagca ccgggcacta
     2521 tccctacgcc gagcgcctgc gggatggaac cagctacatg cgcaatgccg tgaagctggt
     2581 gatcgatgcc tacgacggca ctctcacggc gtatgtgagc gcaccgagcg atccgctcat
     2641 ccggacctgg tcccggattt tcccgggcat cttcgtttcg atggacaagc tccctgacga
     2701 tctcagagcg cacatccgct atcccgacgg gatctaccgg atccagacca atctgtacac
     2761 cacatatcac atggatgacc cggaagactt ctaccaccgg gaggatcagt ggcagatccc
     2821 cactgcagct gagtcggaag gcaaggtgcc gttcatgcgg cacctcgtga tgcggctgcc
     2881 agaggagaag aatgccgagt acatctacat ggtgccgttc acgccgcggg ggaaagacaa
     2941 ccttgccgca tggatggtgg cgcggaacga cggcgcggaa tacggaagac tgcgggtgta
     3001 ccggctgtcg cgacagacgc tggccttcgg cccccagcag atcgtgaacc gcatcaacca
     3061 gaacaccgag atctcgagcc agctcacgct ctgggatcag cgaggctcgc aagtgatccg
     3121 gggtgacctg ctggtgattc cgatcgagga ggcgctcctc tacgtccagc cgatctatct
     3181 ccaggcgcag ggcggaagga ttcccgagct caagcgggtg gtggccgcct accagaaccg
     3241 ggtggtcatg cgggaaacac tggacgctgc cctagccgaa ctgttcggtg gcccgcaggc
     3301 acggcccgca ccagagcccg aaattgtcgc agacagcacc gcttccagcg gactcgtgac
     3361 tcgcgactcg cgagtttcga ctctgctcca gcaggcccgg cagcactacc agaccgcgat
     3421 ccaggctcag cgtgagctcg actgggcccg ctatggtgag gagatgcgcc ggctgggaga
     3481 ggtcctggat cagctgggca gacggtaatc ac
//
LOCUS       DASRPQ010000039         1103 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3141950, whole genome shotgun sequence.
ACCESSION   DASRPQ010000039 DASRPQ010000000
VERSION     DASRPQ010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1103
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3141950"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..708
                     /locus_tag="VFD73_00460"
     CDS             <1..708
                     /locus_tag="VFD73_00460"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane dipeptidase"
                     /protein_id="HZI72503.1"
                     /translation="DSARHNGLTEFGREVVREMNRLGMLVDLSHVSPATMSDALDVSE
                     APVIFSHSSARALTNHPRNVPDSILVRLKRNGGVVMVTFVPAFVSSDAAAWDMDAQRE
                     FNRIKASVSDTAEQRKLQDQWKAAHPQPRATLSQVADHIEHVRDVAGIDHVGIGSDFD
                     GIDTVPEGLEDSSKFPQLFAELIRRGWSDADLKKLAGENLLRAFSGAEATAARLQKTR
                     QPSTKTIEQLDGGAVVP"
     gene            complement(671..>1103)
                     /locus_tag="VFD73_00465"
     CDS             complement(671..>1103)
                     /locus_tag="VFD73_00465"
                     /inference="COORDINATES: protein motif:HMM:NF014193.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SURF1 family protein"
                     /protein_id="HZI72504.1"
                     /translation="EIVSPLVLSNDTAAVLVNRGFVPAPDAVTIPSDSFREPGPKIVQ
                     GLLIPLPSGKGAPIGRGDQTTWARLDRDALARRLPYRIYPYFILQLPDSSLPRFPRRL
                     EAPPLDDGPHLSYAIQWFSFSLIALVFAGIMARQRHHPAVQ"
BASE COUNT          231 a          329 c          344 g          199 t
ORIGIN      
        1 gacagcgctc ggcataacgg cctcaccgag ttcgggcgcg aggtggttcg cgaaatgaac
       61 cggcttggca tgctggtaga cctctcccac gtctccccgg caaccatgag cgacgcactg
      121 gatgtgagtg aagcgccggt catcttttcc cactcttccg cccgggccct caccaatcat
      181 ccgcgaaatg tgccggactc gattctggtg cggttgaaac gcaatggtgg ggtggtcatg
      241 gtcaccttcg tcccggcgtt cgtatcatct gacgccgcgg cctgggatat ggacgcgcag
      301 cgggaattca accggatcaa ggccagcgtc agtgacaccg ccgagcaacg aaagctgcag
      361 gaccaatgga aggccgctca cccgcagcca cgagcgacgc tgagccaggt tgccgatcac
      421 atcgagcacg tccgcgatgt ggccggtatc gaccacgtgg gaattggtag cgatttcgat
      481 ggcatcgaca ccgtccccga gggactggaa gactcatcga agtttcccca gcttttcgcc
      541 gagctgatcc ggcgcggctg gagtgacgcc gacctcaaga agctcgctgg cgagaacctg
      601 ttgcgagcct tcagtggtgc cgaggcgacc gccgcccggc tgcaaaaaac tcggcagccc
      661 tcgactaaaa ctattgaaca gctggatggt ggcgctgtcg tgccataatc cccgcgaaca
      721 cgagagcgat cagcgaaaac gaaaaccact ggatggcgta actgaggtgg ggaccgtcat
      781 ccagcggggg tgcttccagt cgccggggaa atcgggggag tgagctgtct ggcaattgca
      841 ggatgaaata cgggtagatc ctgtatggca gccgtcgcgc caacgcatcc cggtcgagtc
      901 gggcccaggt cgtctgatcc cctcggccga taggcgcacc cttgccgctc gggagaggaa
      961 tcagcaaccc ttggacgatt ttggggcctg gttctctgaa cgaatccgaa ggtattgtca
     1021 ctgcatcggg agctgggaca aagccgcgat tgaccaacac tgctgccgtg tcattgctca
     1081 ggaccagcgg agacacaatc tcg
//
LOCUS       DASRPQ010000040         1663 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1885308, whole genome shotgun sequence.
ACCESSION   DASRPQ010000040 DASRPQ010000000
VERSION     DASRPQ010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1663
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1885308"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..522
                     /locus_tag="VFD73_00470"
     CDS             <1..522
                     /locus_tag="VFD73_00470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72505.1"
                     /translation="GATMHRAFCLIAFVLLPGAAGQAAAQRSQLAPTKSSEAAISVAV
                     GGKVAGKKIDGSGTGSCSHAADASIHGVSASLWKVEYSGTSGSLKQLNLTLWRPKDEG
                     PDQLMLGVETKSGSYRIETGNPGDGKGEGSVTILPSGPGGRLEVRGKEAGGKPVQITI
                     DCSGFTEAQGEGD"
     gene            complement(533..>1663)
                     /locus_tag="VFD73_00475"
     CDS             complement(533..>1663)
                     /locus_tag="VFD73_00475"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HZI72506.1"
                     /translation="EVLGADEQQGWLYYVASPDNPTQQYLFRTRLDGKGGAERLSPKS
                     ESGTHEYDRAPGFRYALETYSSFGNPPIIRLVRLPTHQVIRTLVDNAGLRRRVSSLKR
                     GTVEFFSVTAEDGSKMPAYLMKPADFDSTKKYPLLFHVYGGPGSSTVKDLWGGYYLWH
                     LMLTQHGYLVASVDNHGTPAPLGRKWRKAIYGQLGVLETRDQAVAARTLAQRSYVDPA
                     RVGIWGWSYGGFMSLNALFQHPELYRTAVVVSPVTHWALYDNVYTERFNGLPSQNKAG
                     YDRGSPLTYVNGLRGNLLLVHGSGDDNVHFQNSEMLINALVAANKPFTMMDYPNRTHC
                     LCQGRNTQLHLFELISRYLDANLKEANSPNQVGSERAAADTR"
BASE COUNT          328 a          506 c          520 g          309 t
ORIGIN      
        1 ggagcaacga tgcatcgagc cttctgcctt atcgcctttg tgctgcttcc aggtgcagca
       61 gggcaagccg ccgcccagcg gagccagctg gcacccacga agagcagcga agcggcgatc
      121 agcgttgccg tcggaggaaa ggtggctggg aagaagatcg acggcagcgg aacgggcagc
      181 tgcagccatg cggcggacgc ttccattcac ggcgtgtccg cctcgctctg gaaagtcgag
      241 tacagcggca ccagcgggtc actgaagcag ctcaacctta ccctatggcg gccgaaggac
      301 gagggtcccg atcaactgat gctgggggtc gaaaccaaat cgggatctta ccggatcgag
      361 accggcaacc ccggcgacgg caagggcgag ggctcggtga cgattcttcc cagcggccca
      421 ggtgggcggc tggaggtccg agggaaggag gcgggcggca aaccggtgca gatcacgatt
      481 gactgcagcg gtttcacaga agctcagggt gagggcgact gaacatcacc gatcatcgag
      541 tatcagctgc cgcccgctct gagccgactt gattggggct gttggcctcc ttcagattcg
      601 catccaggta gcgggaaatt agctcgaaca ggtgcagctg ggtattccgc ccctggcaaa
      661 ggcaatgcgt ccggttggga tagtccatca tggtgaacgg cttgttcgcc gcaaccagcg
      721 cattgatcag catctcactg ttctgaaaat gcacgttgtc atcgccgctg ccgtgcacca
      781 gtagcaggtt tccgcgtagc ccattcacat acgtgagcgg tgaccctcgg tcgtaaccgg
      841 ccttgttttg gctcggcagt ccgttgaacc gctcggtgta gacgttgtcg tacagagccc
      901 aatgggtcac cggggacacc accaccgcgg tacgatagag ctccggatgc tggaacaggg
      961 cgttcagact catgaacccg ccgtagctcc aaccccagat tccgacccga gccggatcca
     1021 cgtacgaacg ctgggccagc gtccgcgcag ccacggcctg gtccctcgtt tccagcactc
     1081 ccagctggcc gtagatcgct ttgcgccatt tgcgtccgag cggggcgggt gtcccatggt
     1141 tatcgacgct ggccaccaga tacccgtgct gggtgagcat cagatgccac aagtaatatc
     1201 ctccccagag gtcctttacc gtggaggacc ccggcccgcc atacacatgg aagaggaggg
     1261 gatacttctt cgtggaatcg aagtcggcgg gcttcataag gtaggccggc atcttggagc
     1321 cgtcttccgc cgtgacgctg aagaactcga cggtacctcg cttgagactg ctcacgcgcc
     1381 gacgcaggcc ggcgttgtcg accagcgttc tgatcacttg atgagtgggg agccgtacca
     1441 gccggatgat cggcggatta ccgaaactgg aataggtctc caacgcatag cggaatcccg
     1501 gcgcccgatc gtattcgtgg gtccccgact cactcttggg tgacaaccgc tccgctccgc
     1561 ctttcccatc gagccgagtg cggaagagat actgctgggt aggattgtcc ggcgaggcca
     1621 cgtagtagag ccatccctgt tgctcgtccg cccccagcac ttc
//
LOCUS       DASRPQ010000041         1023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3142137, whole genome shotgun sequence.
ACCESSION   DASRPQ010000041 DASRPQ010000000
VERSION     DASRPQ010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3142137"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..>1023
                     /locus_tag="VFD73_00480"
     CDS             27..>1023
                     /locus_tag="VFD73_00480"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016041.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HZI72507.1"
                     /translation="MSDRPLIRASCDFFSHSSARRSLTCVNALSGFLYGLPPQMRDPV
                     LLAIPFFLLLLTLEWTAARKLEHLTAEAADTARPASGAHLTRDSVASISMGLVSVATT
                     AGWKTLALLGYAAIYAYLAPWHLPATRWYTWVIAILGVDLLYYAYHRIAHRVRLIWAT
                     HQAHHSSEYYNFATALRQKWNNSGEILMWIPLPLLGIPPWMVFFSFSLNLIYQFWIHT
                     ERIDKLPRPFEFLFNTPSHHRVHHGMDKVYLDKNYGGIFIVWDRLFGTFQPELFRPHY
                     GLTKRVDTFNIWSLQTREYVAIARDWRSADRLRDRLGYVFGPPGWLPRAARHTDAN"
BASE COUNT          171 a          354 c          283 g          215 t
ORIGIN      
        1 cacagcgctc aaccgcttac cacctcatgt cggaccgccc gctcattcga gcatcatgcg
       61 actttttctc gcactccagt gcccgtcgta gtcttacctg tgtgaatgcc ctctcaggct
      121 tcctctacgg gctgcctccg cagatgcggg atccggtgct gttggcgatc ccgttcttcc
      181 tgctgctgtt gacgctcgaa tggaccgcgg cccgaaagct ggaacatctc acggccgagg
      241 ctgccgacac ggcccgtccg gcgtcggggg cgcacctcac ccgcgattcg gtggccagca
      301 tctcgatggg actggtttcg gtggccacca ccgccggctg gaagaccctg gccctgctcg
      361 gctatgccgc catctatgcc tatctggcgc cctggcatct gccggcgact cgttggtaca
      421 cctgggtcat cgcgatactc ggtgtcgacc tgctctacta cgcctatcac cggatcgcgc
      481 accgcgtccg attgatctgg gcgacgcacc aggcccatca ctccagcgag tactacaact
      541 tcgccaccgc gctgcgccag aagtggaaca acagcggcga gatcttgatg tggattccat
      601 tgccgctgtt gggaattccg ccctggatgg tgttcttcag tttctccctg aacctgatct
      661 accagttctg gatccacacc gagcggatcg acaagctacc gcgaccgttc gagtttctct
      721 tcaacacgcc gtcgcatcac cgggtgcacc acggaatgga caaggtttat ctcgacaaaa
      781 actacggcgg catcttcatc gtctgggacc ggcttttcgg taccttccaa cccgagctgt
      841 tccggccgca ttacggcctc accaagcgcg tggacacgtt caatatctgg tcgctgcaaa
      901 cccgcgaata cgtcgcgatc gcccgcgact ggcgatcggc cgaccgcctg cgtgatcgac
      961 tgggttacgt gttcggcccg cccggctggc tgccgcgggc ggcccggcac acggatgcca
     1021 acg
//
LOCUS       DASRPQ010000042         1038 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_632046, whole genome shotgun sequence.
ACCESSION   DASRPQ010000042 DASRPQ010000000
VERSION     DASRPQ010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_632046"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..520
                     /locus_tag="VFD73_00485"
     CDS             <1..520
                     /locus_tag="VFD73_00485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72508.1"
                     /translation="RDIYRSHMLLGAYGREWTDCRSNIERMRENQVDDFLDNPLSFVT
                     VADGSDSGCSGDSLKQGPAFSRGGSLLNVAVPWFRAEDYDRIRQISGDNMLPTFAEWE
                     AKMTRTLAQSAAAGVRGEKVIIRPDELLAFAKQIHAKTIDNHVRNQFATVKLLGEERT
                     NASVGLNPRSRT"
     gene            557..763
                     /locus_tag="VFD73_00490"
     CDS             557..763
                     /locus_tag="VFD73_00490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72509.1"
                     /translation="MSEVAQYKKNAEECRELARSMPRPEDRARLEQMAEAWEQLAAEA
                     NNDATPLDKDRRQARELPPGPSGR"
BASE COUNT          213 a          294 c          346 g          185 t
ORIGIN      
        1 ccgagacatt tatcgctccc acatgctgct cggcgcgtat ggccgagaat ggacggattg
       61 tcgcagcaac attgaaagga tgcgtgaaaa tcaggtggat gattttctgg ataacccact
      121 gtcatttgtg acagttgcgg acggctcgga ttcgggatgt agcggagact ctctgaaaca
      181 aggcccagcc ttttctcgcg gggggagtct cttgaatgtc gccgttccgt ggttccgagc
      241 ggaggattac gaccgcattc gccaaatctc gggcgataac atgctcccca cattcgcaga
      301 gtgggaggcc aagatgacac ggacgctcgc acaatccgcc gcggcgggag ttcgtgggga
      361 gaaggtgatc attcgtccag atgaactgct ggcgtttgcc aaacagattc atgccaagac
      421 gatcgataat cacgtgcgca atcaattcgc aaccgtgaag ctcctagggg aggagcgcac
      481 taatgcgagt gtcggactta acccgcggtc gagaacatga tggtctgccc agcttggcgc
      541 tcataggttg gccggcatga gcgaagttgc acagtataag aagaacgctg aggagtgccg
      601 cgagctggcg cgaagcatgc cccgcccaga agacagggcc aggctggagc agatggccga
      661 agcctgggaa cagctcgcgg ccgaggccaa caacgatgcc accccgttgg ataaagaccg
      721 ccgacaggcc cgggagcttc cccccggtcc atccggacga tgacttgctg ctggtctccg
      781 gtgctttcgt gctcggtcgc gtgctgcccg ccatggcagg acgatccata ccgacgcgct
      841 ggggctggtt gctcaccggg ccctactcgc cgggggaggc tggcgcgccg acgcatggtt
      901 atgcgaccag ccctcgaaga agcgaaggcc gcgctgctcg cgagctggca gcgatgacag
      961 caatgggcgg gggtgcggga cgcctgagag aaagccccgg ccgggggcgc tttgggtcct
     1021 gccggggctc agggccgt
//
LOCUS       DASRPQ010000043         1551 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4456, whole genome shotgun sequence.
ACCESSION   DASRPQ010000043 DASRPQ010000000
VERSION     DASRPQ010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4456"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            450..1298
                     /locus_tag="VFD73_00495"
                     /pseudo
     CDS             450..1298
                     /locus_tag="VFD73_00495"
                     /inference="COORDINATES: protein motif:HMM:NF040183.3"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
     gene            1346..>1551
                     /locus_tag="VFD73_00500"
     CDS             1346..>1551
                     /locus_tag="VFD73_00500"
                     /inference="COORDINATES: protein motif:HMM:NF016070.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF397 domain-containing protein"
                     /protein_id="HZI72510.1"
                     /translation="MSASTSEQDSWRTATMSGAQNCVQVKSKDGMIIVGNSRLADGPF
                     LSYTRDEWVAFLDGAKKGEFDDLL"
BASE COUNT          293 a          469 c          488 g          301 t
ORIGIN      
        1 cgcccgggcc gggcaccgcg agacctcggc ctcagccggg ccggcgccgt gcgccatgct
       61 ggtaccgctg ccgcacccac cggccgtcag cgccacgagc acagccgcgg ccgtggcctt
      121 caccaatcgc ctcatgaccc ctcccacacc ggggttcagc gtgacctatc tccttggacg
      181 ccggacggga ccggcgcgtt gggatccggt ccgcgcatcc cgcccgcatg cctggtgaga
      241 cccgtttccc ttgggggggt tcagcgccga ataacacttg ggccacgatg cttgacttct
      301 gagttctgtg ctgcgagtgt ctcctcgttg cttcctggaa gtacacttgg tacttgccag
      361 aggtacggta cgccagggcg gttttcccca gggccagccc ggacggtccg tagttgcatc
      421 gtcgcaatga ggtgagccgg tgcgtccacg tggccgctga tcgaagcccc actctccgcc
      481 gtcgggagct ggctagccag cagcgcgacc tgcgtaagca atcgggccgc acggtcgagg
      541 atgtggcgcg ggagttgctg tgctcgccgc ccaagatcag ccgcatcgag accggggtgc
      601 gcccggccag cttgcgcgac gtccgcgatc tctgcgccat ctacggcgtc gatgactcgc
      661 tccgtgaccg gctgatgggc ctggcccggg aggcaaaaca gcagggctgg tggaacaagt
      721 acgaagatat cgccatcgac aggcttatcg ggctggagat cgaggccgca caggtcagct
      781 cgtacgaatc ctgcgtgatt ccatggatgt ttcagacgaa agagtacgcc cgggcagtta
      841 tcaggggaag cctgccgcga attgacgacc acgtcttgga cgagcgagta gcggccagga
      901 tcacaaggca ggaaataatc acaagggaat cgccgccgca cttctggtca ctggtagatg
      961 aatcatcgct ccggcgtcgt gtgggcagca accagatcat gcgcgatcag cttaagggaa
     1021 tggtagatct tgccgccatc cccaacatga cacttcaggt cgttccgttc ggcctcgggg
     1081 cacacccggg ccttgacaat acgtttgagt tcctggagtt ccagtctggc tagcctccgg
     1141 tggtctatct ggagaatatg gcgggagggc tgtacctcga gagcgcatcg gatgtcgata
     1201 ggtataaaga ggccttaatg cacctgcgtg ctggtgctct tgatccagaa ggttccgttt
     1261 ctctgatcga acaagttagg gagaccttca aagcctgaaa gcaggcttac ccgtctccct
     1321 caagcacacc aaaggaggtg tggggttgtc agcttctacc tcagagcagg attcctggcg
     1381 taccgccacg atgagcgggg cccagaactg cgtacaggtc aagtccaagg atggcatgat
     1441 tatcgtcggg aattcacggc tcgccgacgg gccatttctc tcctataccc gcgatgagtg
     1501 ggtcgcgttt ctggacgggg caaagaaggg cgagttcgac gaccttcttt a
//
LOCUS       DASRPQ010000044         1813 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3452478, whole genome shotgun sequence.
ACCESSION   DASRPQ010000044 DASRPQ010000000
VERSION     DASRPQ010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1813
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3452478"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            428..1075
                     /locus_tag="VFD73_00505"
     CDS             428..1075
                     /locus_tag="VFD73_00505"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZI72511.1"
                     /translation="MTATAVRMHGDVSVTDMVTRARNDDTQAWDVLVERYAPLVWSIC
                     RRYRLSGADAADVGQNVWLRLVEQLDRLRDPAALPGWLVTTTQRECWQFVRTAGRRHA
                     VEQVPDAADIPGPTGVVEQELLAVELGAALREAFSQLPSGYQQLITLLTQDPPVPYAE
                     ISARLGIPVGSIGPTRRRCLNRLRRHPAVAALINPEADSQANRTPGRLAAVGCRV"
     gene            1250..>1813
                     /locus_tag="VFD73_00510"
     CDS             1250..>1813
                     /locus_tag="VFD73_00510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72512.1"
                     /translation="MPESQTVSSGEHTDPQPTAAEHVAPERSVQDPAAQFRGTVRGWP
                     ALDVRQLRHPSEPSRFALAASASILLGGLGLLVALRFAGVTEIILITATLAVALGSVW
                     WLVQVHRAKLLGGAARVTPQTFPVLSAAADEVKRQLDYTQPVEIFVLAQMDESVLLTS
                     FFGTHVLIMEGALVAELVKPENRPQLDF"
BASE COUNT          338 a          608 c          555 g          312 t
ORIGIN      
        1 cgattttgct gcagtaggag taccgccaaa acaacctgct gttgcacagg gccaaggttt
       61 atgccaacgt ctccgcgcca agcccgcagc ggtccaagca cctcaaagcg caccggtgga
      121 ccgcctggat cgctcatccc gcctccccgc gttgagcaat cccttgcagt ttagctcggc
      181 cttgctgaac gcctcatcac agttttctcc aggaagcctc aacgcacgaa cgccaggctg
      241 agccggcaag cgatacccac tgatgccgtg tgactcggca ctggctgtgt aatcccgaac
      301 cacagagcgg ctatgggtgt ccagcccccg cggcagtgca tcggctggtg cagcgaccag
      361 tgcagcggtt actgcaatcc ccgcggcgat gatgagccgg ttcgagttcg aaagggagag
      421 caaagggatg accgctacgg cagttcggat gcatggtgac gtgtcagtca ccgacatggt
      481 tacgcgcgca aggaatgacg acacgcaggc gtgggacgtc ttggtcgagc gctacgcccc
      541 gctggtgtgg tcgatctgcc gcaggtaccg gctgagcggc gctgacgccg ccgacgtcgg
      601 gcagaacgtc tggctgcggc tggtggagca acttgacagg ctgcgcgacc cggccgcgct
      661 tcctggctgg ctggtaacca cgacccagcg ggaatgctgg cagttcgtgc gcacagcggg
      721 caggaggcat gctgtcgaac aggtgccgga cgccgctgat attcccggcc cgaccggggt
      781 ggtagagcag gagctgctcg cggtcgaact cggtgcagcg ttgcgcgagg cgttcagtca
      841 gcttccgtcc ggctaccagc agctgatcac cctgctaact caggaccctc cggtgccgta
      901 tgcggagatc agcgcccggc ttggcatccc ggtcggcagc atcgggccta ctcgccgccg
      961 ctgtctcaat aggctacgtc gccacccggc cgtcgccgcc ctgattaacc ccgaagccga
     1021 cagccaggcg aacaggacac cgggcaggct cgctgcggtt ggttgccggg tatgaccgga
     1081 cgccggagct gggaaacagc ttggcctcac agccagcctc gtccggagcg cccgcgagaa
     1141 cggaagcaat caaggacagg agtccgcatc gtggctccaa tagccaggat cggcatcaaa
     1201 gtcctcccaa tggctcaaac tcaccccgac gcactgcaca ggagacgtta tgcctgaatc
     1261 ccagaccgtg agctccggcg agcacactga cccacaaccc accgctgccg aacatgttgc
     1321 accggaacga tccgttcagg acccggctgc ccagtttcgc ggcaccgtcc gcggctggcc
     1381 tgccctcgat gtccgccaac tcaggcatcc gtccgagccc tcccgattcg ctctcgccgc
     1441 ctcggcatcc atacttcttg gaggtctcgg cctgctggtg gccctgcggt tcgccggcgt
     1501 tacagagatc atcctcatca ccgccaccct ggcggtggca ctcgggtcgg tttggtggct
     1561 ggtgcaggtc caccgggcaa agctgctcgg aggtgctgcg cgcgtcacgc cgcagacctt
     1621 tcccgtgctc agcgcagcag ccgacgaagt gaaaagacag ctggactata cccagccggt
     1681 cgagattttc gtcctcgccc agatggacga gtcagtcctg ctcaccagct ttttcggcac
     1741 gcacgtcctc ataatggagg gcgccttggt ggccgaacta gtcaaaccgg aaaaccgccc
     1801 acagctagac ttc
//
LOCUS       DASRPQ010000045         1041 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1258689, whole genome shotgun sequence.
ACCESSION   DASRPQ010000045 DASRPQ010000000
VERSION     DASRPQ010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1258689"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(309..779)
                     /locus_tag="VFD73_00515"
     CDS             complement(309..779)
                     /locus_tag="VFD73_00515"
                     /inference="COORDINATES: protein motif:HMM:NF023420.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3489 domain-containing protein"
                     /protein_id="HZI72513.1"
                     /translation="MRIYVIGNDGITLCREPLATVTEGEVAVTSKEELQAAPLSGKRL
                     LALWNALPGVEKRKKLGDRAALVDQLWSAIEALPDPEPEPDAKRQSKQGKVIAMLSRP
                     EGATVDEVASAMGWQRHTVRGLFSGTLKKKLGLTLASAQEERGRVYRITEPAGA"
BASE COUNT          163 a          341 c          329 g          208 t
ORIGIN      
        1 cgcgcttttc gcgctctccg gtcaaagtct gcaggcggcg cttccgccac agctctgctc
       61 ttgtagctgg tgagcgaggg ctcggatcag cagatcgcga ctgagccctt ggggcggtgc
      121 cacccgatgc aattggcgcc aggcaagacg cagatcgtgc gtcgaccgat ccaccaattc
      181 ggcaatttgg ctgtcgacct cggccacaac tccgccccgc ggaccaagct tcgggtcgcc
      241 gcattgaccg ggaaccgagg acggcccgcc agagtgtggg cgggccgaag tgccgtggcg
      301 tagcggtttc atgcgcctgc cggttcggtg atgcggtaga cccggccgcg ttcctcttgt
      361 gccgaggcga gggtgagccc gagcttcttc ttcagggttc ccgagaagag accgcgcacc
      421 gtgtgccgct gccaccccat tgcgctcgcg acctcgtcga cggtggcgcc ttcggggcgg
      481 ctcagcattg cgatgacctt accctgcttc gactgccgct tcgcgtcggg ttccggttcc
      541 gggtcgggca gcgcctcgat tgccgaccac agctggtcga ccagtgccgc gcggtccccg
      601 agctttttcc gcttctcgac accgggcagt gcattccaca atgccagcag ccgcttgccg
      661 ctgagcgggg cggcctgcag ttcctccttc gaagtgacgg cgacctcgcc ctcagtcact
      721 gtggccaatg gctcgcggca cagagtaatt ccgtcattgc caatcacgta gatgcgcatg
      781 ggtgggttct cctgacttat ccggcggccg gttgccgccg gtgacccact cacgctctct
      841 ttgccgagca aagccactcc attccggata atcttgtggc gttgtcgggc gcagttcgag
      901 catggaatta ctcgggctga acactgcagc tcgtactggc gatgacaggc cacagtcatc
      961 acgaactgat gaccgaagcg tccgctgtcg agtcgaatgc tgaccgaggc tgggcgggaa
     1021 ggcggtccca gtttgactca a
//
LOCUS       DASRPQ010000046         1551 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1258738, whole genome shotgun sequence.
ACCESSION   DASRPQ010000046 DASRPQ010000000
VERSION     DASRPQ010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1258738"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..711
                     /locus_tag="VFD73_00520"
     CDS             <1..711
                     /locus_tag="VFD73_00520"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI72514.1"
                     /translation="SYPMATTTLTRALELHDKLGDRLGQADALSELGCVQRLTGDYRE
                     ARTSLERALDLYQDLGDRHGQADSLRYLGRVFQETGDYEIVTSCYADALELYRGLDDR
                     LGQAHTLNYLGIAQNVSDDYPAAEDTLTDALKLYRDLGHRLGQAEVLNNLGDSYAISD
                     LGQARTHYEQALEIARSISVILEEARALEGIGNIEILETRPGDESGYLRRALGLYRRI
                     GSPHAARVSETLRFHGLG"
     gene            1065..>1551
                     /locus_tag="VFD73_00525"
     CDS             1065..>1551
                     /locus_tag="VFD73_00525"
                     /inference="COORDINATES: protein motif:HMM:NF013384.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-eliminating lyase-related protein"
                     /protein_id="HZI72515.1"
                     /translation="MSDIDLRSDTVTLPTADMLRAMTRAPLGDDVFGDDPTVNRLEET
                     AAGRMGKQAALFVAGGTMGNLLGLLVSACPGQEVIADADSHVFLNEAAGAAMVGGVQI
                     RQVRTERGVLSPAQVLAALRPADDDHQPLSAAVMIENTHNWHGGVAWSLQDLQRLSET
                     AR"
BASE COUNT          294 a          488 c          493 g          276 t
ORIGIN      
        1 agttatccga tggccaccac gaccctgacc cgagcgcttg agttgcacga caagctcggc
       61 gaccgactcg gccaagccga tgcgctaagc gaactcggct gcgtgcagcg gctgaccgga
      121 gactataggg aggcaagaac aagccttgaa cgggcgctcg atctatacca ggatctcggt
      181 gaccggcacg gccaggctga ctcgctgcgc tatctcggta gggtatttca ggaaaccggg
      241 gactatgaga tcgtgacctc ctgttacgcc gacgcgctgg aactctatcg cggcctcgat
      301 gaccggctgg gccaggctca cacactcaat tacctcggaa tagctcagaa tgtatcagat
      361 gactaccccg cagctgagga tacactgact gacgcgttga agctgtatcg cgatttgggt
      421 catcgccttg gccaagccga ggtactcaat aacctgggcg attcgtacgc catctccgat
      481 ctcggccagg cccgcactca ctacgagcag gctctcgaga ttgctcgcag tatctccgtg
      541 attcttgagg aggcccgcgc gcttgaaggc attggtaaca ttgaaattct ggagactaga
      601 cccggggatg agagtggata tctccgccgc gcactgggac tgtaccgacg gatcggatcc
      661 cctcacgcgg cacgcgtcag tgagactctc cgttttcatg gtctaggata accaggctct
      721 ggttggtacc tcgcctgaac caaagtcgcc ttcacttcgg caggactgca ccatcaatcc
      781 ggccgccaga agacggccct ctgtcaattt gcacaaacga acttggttca cattacctgc
      841 cgctcgccga cagcggccct acccatcgcc tccaggttcg ctgctcagcg cggccgggat
      901 gcgggatcat gggagctcag gtgcgggcgg gccccggagg cgccggacgg ccgctgcgcc
      961 ggctcgcgga ttgtaaggtg acctgtcgcg ggatccggtg aaaccttccg ggccggcggg
     1021 cctcggtgaa tggctgacga tccaccgcgc ggaagcgagt tgagatgagc gatattgacc
     1081 ttcggtccga cacggtgacg ctccccacgg cggacatgct ccgggctatg accagggcgc
     1141 cgctcggcga cgacgtcttc ggtgacgacc ccaccgtcaa ccggctggag gagacggcag
     1201 ccgggcggat gggcaagcag gccgcgctgt tcgtagccgg cggaaccatg ggcaatctgc
     1261 tcggtctgct ggtcagcgcc tgtcccgggc aagaggtcat cgcggatgct gactcccacg
     1321 tgttcctgaa cgaggcggca ggagccgcga tggtcggggg cgtccagatc cggcaagtgc
     1381 ggacggagcg gggcgtactg agcccggcgc aggtcctggc cgcgctccgc cccgccgacg
     1441 atgatcacca gccgctgtca gctgccgtca tgatcgagaa cacgcacaac tggcatggcg
     1501 gagtggcctg gtccctgcag gatctgcagc gcctgtccga aactgcccgc t
//
LOCUS       DASRPQ010000047         1391 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3452920, whole genome shotgun sequence.
ACCESSION   DASRPQ010000047 DASRPQ010000000
VERSION     DASRPQ010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1391
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3452920"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(97..768)
                     /locus_tag="VFD73_00530"
     CDS             complement(97..768)
                     /locus_tag="VFD73_00530"
                     /inference="COORDINATES: protein motif:HMM:NF015534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Type 1 glutamine amidotransferase-like
                     domain-containing protein"
                     /protein_id="HZI72516.1"
                     /translation="MKLLLTSGGVKNASIHQTLVDLLGKPIAESNALCIPTAQYGHPR
                     VGPGVGAWRFISGNSENPMVDLGWKSVGVLELTALPGIDAERWVPLVREADVLLVAGG
                     DALYLCHWMRQSGLADLLPSLTETVWVGLSAGSMVMTPTIGEDFIQWKPPTGDDSTLG
                     IVDFSICPHLARNGMPGNSMAEAEQWAAGISGPAYAIDDQTAIKVVDGTVEVVSEGHW
                     KHFPS"
     gene            1065..1391
                     /locus_tag="VFD73_00535"
     CDS             1065..1391
                     /locus_tag="VFD73_00535"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HZI72517.1"
                     /translation="MEAVLRALADESRRTLLEALADGEATAGELVALLPIARPGASRH
                     LRVLREAGLVEVRQEAQRRIYSLRPQPLAEVDEWLGRYRALWEQRLDALHTEVARGKH
                     ERRSTR"
BASE COUNT          238 a          449 c          472 g          232 t
ORIGIN      
        1 gccagcacgg gcgcgtggcc agctgggccg cgcaggagca gcaagcgcac agcggcacgt
       61 gagggcgctg cgctaactcg cggtcggcgc cggcacttat gacggaaagt gcttccagtg
      121 cccttctgac acgacctcga cggtgccgtc gaccaccttg atggccgtct ggtcgtcgat
      181 ggcgtacgcc ggccccgaga tgccggccgc ccattgttcc gcctcggcca tggagttgcc
      241 cggcatgccg ttgcgagcca ggtgtggaca gatcgagaag tcaacgatgc ccagcgtgct
      301 gtcgtcgccg gtcggcggtt tccactggat aaagtcctcc ccgatcgtgg gggtcatcac
      361 catgctcccg gcgctgagtc ccacccagac cgtttcggtc agcgacggga gcaggtccgc
      421 cagcccggac tgccgcatcc agtggcacag gtagagggca tcgccgccag ccaccagcag
      481 cacgtccgcc tcacggacca agggcaccca gcgctctgca tcgatgccgg gcagtgcggt
      541 gagctccagt acgccgaccg acttccagcc caggtcgacc atgggattct cggaattccc
      601 actgatgaac cgccaggctc cgacgccagg gccgacccgg gggtgtccgt actgagccgt
      661 gggaatgcac agggcgttgg attcggcgat cggcttgccc agcaggtcga ccaacgtctg
      721 gtggatgctg gcgttcttga cgcccccgga ggtgagaaga agtttcaagt tgcatcccga
      781 ttcgagtgcg atggagcggt cgcgatgttg acctgagaca accgcgaaac tcatcgctgc
      841 tgacccaggc aaaactatcc gcacaggccg ctcgctccgc ggtagctcac gcgcacgcgg
      901 caccgcacgc tacacgcggc gcatgcgtgc gttggttcgt tcctacctac ctggcgtttc
      961 gtggggtggc tcatgtcgcg cggttcgaga ggttcagcgc tcgaagcgaa cctgaacgct
     1021 tacgtacctt gacgggtacg taaccacttc gctacattga tcggatggaa gcagttctgc
     1081 gggcgctggc ggacgagagc cggcgcacgt tgctagaggc tttggccgac ggggaagcga
     1141 ccgcgggtga actggtggcc ctgctgccga ttgcccgccc gggcgcatcc cggcacctgc
     1201 gggtgctgcg ggaggcgggt ctggttgagg ttcgccagga ggcgcagcgg cgcatctaca
     1261 gcctccgccc gcagcctctc gccgaggtcg atgaatggct gggtcgatac cgggccttgt
     1321 gggagcagcg gctggacgcc ctgcacaccg aggtcgcccg aggaaagcac gaacggagga
     1381 gcaccagatg a
//
LOCUS       DASRPQ010000048         1748 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3144042, whole genome shotgun sequence.
ACCESSION   DASRPQ010000048 DASRPQ010000000
VERSION     DASRPQ010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3144042"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..404
                     /locus_tag="VFD73_00540"
     CDS             <1..404
                     /locus_tag="VFD73_00540"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HZI72518.1"
                     /translation="LLLLLTAGVTGQFAHFRPQQVSGVALLAWAYLVVFGSLVGFTAY
                     IWLLGATSIAKAGTYAYVNPIVAVLLGWAILGEQVTPRMLLAAAVILVGVALVSVKWS
                     PERVLTWRPSRMPTSPDLPTLRASRDSPDDC"
     gene            complement(346..1047)
                     /locus_tag="VFD73_00545"
     CDS             complement(346..1047)
                     /locus_tag="VFD73_00545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72519.1"
                     /translation="MSRRRALRWVAVVSLFSCSTAYQELHRGEGLYDAGRYRESYVAF
                     QRALQASGDPAIQFSIGNALYRMRRYEEAAKSFREATAVPRLRQRSYFNLGNANVRAA
                     EDAQDKARFLEQAIQAYEEALRLEPADSAAKWNLELALKRRGEDRESGGSPGRGRSAD
                     YGRGNMSTPGYEGNPEAAVGAMAGGGFGAGEGESAEELSESQARQLLEAVEREQLSSH
                     QGNPAMRGGSEGQDW"
     gene            complement(1044..>1748)
                     /locus_tag="VFD73_00550"
     CDS             complement(1044..>1748)
                     /locus_tag="VFD73_00550"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HZI72520.1"
                     /translation="NAADGGTARLTLAKRTISDLLAASPHNRVGLVVFGGSAFLQLPL
                     TTNYAAFQRYLAAATTDDLGDPGTDLGNALMTAATTFEHEGERGYQSVLLISDGENGR
                     SDIGPALTRLARAHIPVLAVGVGTPEGSPIPADSTEAPEKWHRDHIGRIVISRLDEGD
                     LRRAARETGGVYQRWSPTVAQSLALDLARLSQRPITSSDARERVDRFQWPLALAIVFL
                     ALEQLLRMLPPRRATA"
BASE COUNT          258 a          593 c          564 g          333 t
ORIGIN      
        1 gcctgctcct gctccttacg gctggtgtca ccggccagtt cgcgcacttc cggccccagc
       61 aagtgtccgg cgtcgccctg ctggcctggg cgtatctcgt ggtgttcggc tcgctggtgg
      121 gctttacggc gtatatctgg ctgctgggag ctacgtcgat cgcgaaggca ggtacctacg
      181 cgtacgtcaa tccaatcgtc gcggtgctgc tgggctgggc catcctgggc gagcaggtca
      241 ccccgagaat gttgctggct gccgcagtga ttctggtggg ggttgccttg gtcagcgtga
      301 agtggtcacc ggaaagggtg ctgacgtggc gcccgagtcg catgcctacc agtcctgacc
      361 ttccgaccct ccgcgcatcg cgggattccc ctgatgactg ctgagctgtt cccgctcgac
      421 ggcctccagg agctgtcgcg cctggctttc actcagctcc tcggcagatt ctccttcgcc
      481 ggcgccgaat ccgccccctg ccatggcacc gaccgcggct tccgggttcc cttcgtaccc
      541 gggggtactc atgttgcccc gcccataatc cgccgagcga ccccgaccgg gagagcctcc
      601 ggattcgcgg tcttcgcccc ttcgcttgag cgccagttcg agattccact tggccgctga
      661 atcggccggt tcgagccgaa gcgcttcctc gtaggcttgg atcgcctgct ccaaaaatct
      721 ggctttgtcc tgggcatcct ctgccgcgcg aacgttcgcg tttcccaggt tgaagtaact
      781 ccgctgccgc aggcgaggaa ccgcggttgc ttcccggaag ctcttggccg cctcctcgta
      841 ccgccgcata cgatagagcg cgttgccgat agagaactga atggcgggat ctccgctggc
      901 ctggagcgcc cgctgaaacg cgacgtacga ctcccgatac cggccggcat cgtagagccc
      961 ttcgccgcga tgcagctcct ggtaggcggt actgcaggag aacagggaaa cgacagctac
     1021 ccaccgtagg gcgcggcgcc ggctcatgcg gtggctctcc tgggcgggag catccggagc
     1081 agctgttcca gagccaggaa cacgattgcc agtgccagcg gccactgaaa ccggtccacc
     1141 cgttctcgcg cgtcactcga ggtgatcggt cgctggctca ggcgcgccag gtcgagggcg
     1201 aggctttgcg ccaccgtggg cgaccaccgc tggtacaccc caccggtctc tcgggccgcc
     1261 cggcggagat cgccttcgtc cagccgcgag atcacgatcc gtccgatgtg atcgcgatgc
     1321 cacttttccg gcgcctcggt gctatcggct gggatgggac tgccctcggg agtgccgacg
     1381 ccgacggcga gcacgggaat gtgcgcccgc gcgagccgag tcagcgctgg cccgatgtcg
     1441 ctccgaccat tttccccatc ggaaatcagg agcaccgact ggtagccccg ctccccctcg
     1501 tgctcgaagg tggtggctgc cgtcatcaga gcattgccca ggtcggtgcc gggatctccc
     1561 agatcgtcgg tcgtggcggc agccaggtac cgctggaacg ccgcgtaatt ggtcgtcagc
     1621 ggaagctgca ggaaggcgct tcctccaaac acgacgagcc ccacccggtt atgcggcgat
     1681 gcggcgagca ggtcgctgat ggttcgcttg gcgagcgtca ggcgagcggt gccgccatcg
     1741 gccgcatt
//
LOCUS       DASRPQ010000049         2239 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_5920, whole genome shotgun sequence.
ACCESSION   DASRPQ010000049 DASRPQ010000000
VERSION     DASRPQ010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2239
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5920"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="VFD73_00555"
     CDS             complement(<1..184)
                     /locus_tag="VFD73_00555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72521.1"
                     /translation="MNARDVAEAALGTAGIWLIVSRIPDFGLNIALWPVGPDGVLHWV
                     GVIHFLLWLGCGLALIL"
     gene            417..725
                     /locus_tag="VFD73_00560"
     CDS             417..725
                     /locus_tag="VFD73_00560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72522.1"
                     /translation="MPVSEREQIVRQQFSLGHTVYAGAHTRCGCGFRDDQDPAAAARS
                     RAALLQYLERAAATGPVELFVCWEGDWAKLPRTRTDRSLASLRADIDWLGELAFTRVT
                     "
     gene            842..1471
                     /locus_tag="VFD73_00565"
     CDS             842..1471
                     /locus_tag="VFD73_00565"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HZI72523.1"
                     /translation="MRRPADDRLAVQGESVPAKQRKIIVHIATSLDGFIAGPGGDLEW
                     LTSRPAPEGFYGMGAFEKTIDTKVLGRKTYDISLGLGAKFDPRSPTIVFSRRPPPRDV
                     PSGVEFVNEPIADFVSRLRQQPGKHIWLMGGGELIAAFLDAGAVDEFVVSVVPVLIGE
                     GIPLLAPRHRHVSLHLHSVERFDDGLVQLHYHIPNQAAVRQAARRQRER"
     gene            1468..1818
                     /locus_tag="VFD73_00570"
     CDS             1468..1818
                     /locus_tag="VFD73_00570"
                     /inference="COORDINATES: protein motif:HMM:NF016854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HZI72524.1"
                     /translation="MTVSPSFRTFVLEQLGRSVPGIRGQSMFGGVGIYGRDLFFALIA
                     DDTLYFKVDESTRPEFEARGAAPFRPYGEHGEVMQYYRVPEDLLDDAELLGRWAEKAI
                     VVARRAKRPHRRRN"
     gene            1821..>2239
                     /locus_tag="VFD73_00575"
     CDS             1821..>2239
                     /locus_tag="VFD73_00575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72525.1"
                     /translation="MPAAPEHLRIAAIVFAMVSVVLLAVAVRQWSAPPSEAGSDESAQ
                     TRWQGNLLLFLLSIGLVVSVLLAADLAGWNRDRALWISVGSFLGLMTLLRPWWFWENY
                     RARWLRNLIGDEATMVVYLGIAAIMVWVGLNTDWTFGR"
BASE COUNT          397 a          678 c          729 g          435 t
ORIGIN      
        1 acagaatgag ggccaatccg cagccgagcc agagaaggaa gtgaatcacc cccacccagt
       61 gcagcactcc gtccggaccg accggccata aggcaatgtt gagaccgaag tcgggtatcc
      121 ggctcacgat cagccagatg ccggcggtgc caagggcggc ttcggctacg tcacgcgcgt
      181 tcacacccgc ctccctggcg cactctcgcc acgcggatca gcttgaagag gtcaccctca
      241 tacagaggta gcatggcaat cgattcggtc aaccggtacc acaatgtgta ctcggacttc
      301 gcaagcagcg caaaagtcac ctgaggtcga ccgctttgtg cctagccgta tttatcgcct
      361 ctgaccgacc tccggttctg gtgccatggg atgagactgc cccggctttc aacgtcgtgc
      421 cggttagtga gcgtgagcag attgtgcgtc aacagttctc tctggggcac acggtctacg
      481 cgggtgcaca tacccgatgc ggctgcggat tcagggatga ccaggatccg gcagcggcgg
      541 ctcgttcgcg ggcagcgctg ctgcagtacc tcgaacgggc ggcggccacg ggtccggttg
      601 aactcttcgt ctgctgggaa ggagattggg ccaagctccc ccgtacccgg acagatcgtt
      661 cgctggcttc gctgcgcgcg gacattgact ggctcggcga gctggcgttt actcgcgtca
      721 cttgacggcg gcttgaccgc atgccgaccg tgcaatccct acgcggaggg cttcatgcga
      781 gacgcttctg agcaggcggc ggcgcttcag atctgaaggg atgtccagta atttcgcagg
      841 catgcgcaga ccggcggatg atcgattggc cgtccagggt gagtcggtgc cggcaaagca
      901 gcgaaaaatc atcgttcaca tcgcaaccag cctggacggg ttcatcgccg gtcctggcgg
      961 tgacctcgaa tggctgacgt cgcgtccagc ccccgaaggc ttctacggca tgggcgcctt
     1021 cgagaagacg atcgacacga aggtgctggg ccggaagacc tatgacatca gtctaggcct
     1081 gggagcgaag ttcgacccca ggagcccgac catcgtcttt tcccgccgtc caccaccgcg
     1141 cgatgtcccg agcggcgtgg agttcgtgaa cgaacccatt gccgattttg tgagccgcct
     1201 tcggcagcaa ccgggaaagc atatctggtt gatgggtggc ggcgaactca tcgccgcctt
     1261 tctcgatgcg ggggcggtcg acgagttcgt cgtcagcgtc gttccggtgc tcatcggaga
     1321 gggtatcccg ctgctggccc cacgtcaccg tcacgtgtca ttgcatttgc actcggttga
     1381 gcgcttcgat gacggcctgg tgcaactgca ctaccacatt ccgaaccagg cagcggtgcg
     1441 gcaggctgcc cggcgccaac gcgagcgatg accgtcagtc ccagttttcg cacgtttgtc
     1501 ctcgagcaac tcggcaggag tgtgccggga atccgcggac aaagcatgtt cggtggggtg
     1561 gggatttacg gccgtgatct gttctttgcc ctcatcgcgg acgacacgtt gtacttcaag
     1621 gtcgacgaat cgacccggcc tgagttcgag gccaggggcg cggccccatt ccggccttac
     1681 ggagaacacg gagaggtgat gcaatactac cgtgtgccgg aggatctgct cgacgacgcc
     1741 gagctgctgg gccggtgggc cgagaaggca atcgttgtgg ctcgccgggc caaacgccct
     1801 caccggcgaa ggaactagga gtgccagcgg cgccggagca cctccgaatc gcggcaatcg
     1861 tctttgcgat ggtgagtgtg gtgctgctcg ccgtcgccgt gagacaatgg tcggccccac
     1921 cctccgaggc cggctcggac gagagcgcgc aaacccgctg gcaagggaat cttctcctct
     1981 tcctgctatc cattgggctg gtcgtgagtg tgttgctcgc tgccgacctg gcgggttgga
     2041 accgggatcg ggcgctctgg atttcggtgg gctcgtttct cggtctcatg acgctgctcc
     2101 ggccgtggtg gttctgggag aactaccgtg cccgctggct gcgcaatctg atcggcgatg
     2161 aggcaacgat ggtggtgtac ctgggcattg cagcgatcat ggtctgggtc gggctgaaca
     2221 ccgactggac cttcggccg
//
LOCUS       DASRPQ010000050         1414 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1886867, whole genome shotgun sequence.
ACCESSION   DASRPQ010000050 DASRPQ010000000
VERSION     DASRPQ010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1414
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1886867"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..785)
                     /locus_tag="VFD73_00580"
     CDS             complement(<1..785)
                     /locus_tag="VFD73_00580"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HZI72526.1"
                     /translation="MRPEVSGRIPARLILPALRSEALSGFAHEAGRIADALEIGVGGF
                     IIFGGTAETVRKLTADLLRRAGRPLLLAADLERGAGQQIAGLTEFPPPMALASIGDPN
                     VVRWAASVTAQEARAVGINWIFAPVADLDLSAENPIVQTRAFGDDPNEVATCVRHWIE
                     GCQSAGALACAKHYPGHGRTTVDSHITLPVVEAPASALRSADLLPFRVAIESGVASIM
                     TAHVAYPALDNSSLPATLSRTVLGELRRNSRFDGLVVTDALIM"
     gene            complement(782..>1414)
                     /locus_tag="VFD73_00585"
     CDS             complement(782..>1414)
                     /locus_tag="VFD73_00585"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: protein motif:HMM:NF015647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HZI72527.1"
                     /translation="RILLNLGGMANLTYVQRRAQEDGVLAFDTGPGVAIIDATARLVD
                     PAIDFDRDGRIAAKGRIDLAVLEELLADPFFRMSPPKSTGRERFGDQYARTLFERVRG
                     ADAVATAVELTARTVAEAIARWTPPTVEVVASGGGCHHPILMKSLSGHLQEGGAHPLR
                     RFDDLFFPGDAKEAVAFALLGYLTLHGQPGNLPAATGAEGARVLGTVTPA"
BASE COUNT          250 a          469 c          467 g          228 t
ORIGIN      
        1 tccatgatga gcgcatcggt caccaccaag ccatcgaaac gactgttccg tcggagctcc
       61 ccgagcacgg tgcgggagag cgtggcgggt aaactcgagt tgtccagcgc ggggtaagcg
      121 acgtgcgcgg tcatgatgga cgcgacgccg ctctcgatgg caacccggaa gggcagaagg
      181 tccgcggagc ggagggcgga ggcaggtgcc tccaccaccg ggagcgtgat atgtgaatcc
      241 acggtggtgc gcccgtgccc cggataatgc ttcgcgcagg ccagggcgcc ggccgactgg
      301 cagccctcga tccagtgccg cacgcaggtg gcaacctcgt tggggtcatc cccgaaggca
      361 cgggtctgca cgatggggtt ctcggccgac aaatccagat cggccaccgg ggcgaaaatc
      421 cagttgatgc ctaccgctcg ggcttcctga gccgtcaccg atgcggccca ccgcaccacg
      481 ttcggatcac ctatcgacgc caacgccatc ggcgggggaa attcggtcag tccggcgatc
      541 tgctgcccgg cgccgcgctc gagatcggcc gccagcagca gcggtcgtcc ggcccgccga
      601 agcaagtcgg cggtcagctt gcgcacggtt tccgcggtgc cgccgaagat gatgaatccg
      661 cccactccga tctccagcgc atccgctatg cgaccggctt cgtgggcgaa tccgctgagc
      721 gcctccgagc gcagtgcggg caggatgagg cgcgcgggaa tccggccaga gacctcgggc
      781 ctcatgccgg tgtcaccgtg ccgaggaccc gtgcgccttc ggcgccggtg gcggcgggaa
      841 gattaccggg ctgtccgtgc agcgtcagat atcccaacag cgcgaacgcc actgcttcct
      901 tggcatcgcc gggaaagaac aagtcgtcga aacggcgcaa tgggtgggct cctccttctt
      961 ggagatggcc agagaggctc ttcatcagta tcggatggtg gcagcctcca ccggaggcca
     1021 ccacctcgac tgttggggga gtccagcggg caattgcctc tgccaccgtt cgggcggtca
     1081 gctccacggc agtggcgacg gcatcggccc cgcgcacccg ttcgaacagt gtgcgagcgt
     1141 attgatcgcc gaaccgctcc cgcccggtgc tcttcggcgg gctcatccgg aagaacggat
     1201 cggccaacaa ctcttcgagc acggcgaggt cgatccgtcc cttggcggca atgcgtccat
     1261 cccgatcgaa atcaattgca gggtcgacca ggcgtgccgt agcatcgatg atcgccacac
     1321 cggggccggt gtcgaacgcc aggacaccgt cctcctgcgc tctccgttgc acgtacgtca
     1381 gatttgccat tccccccaga ttgaggagaa tgcg
//
LOCUS       DASRPQ010000051         1071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1887009, whole genome shotgun sequence.
ACCESSION   DASRPQ010000051 DASRPQ010000000
VERSION     DASRPQ010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1887009"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            177..332
                     /locus_tag="VFD73_00590"
     CDS             177..332
                     /locus_tag="VFD73_00590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72528.1"
                     /translation="MNAKTLMGWVAIAFVVWWVIEEPAAAAHLVHNIGAFLSTAAHSL
                     SSFVSSI"
     gene            351..878
                     /locus_tag="VFD73_00595"
     CDS             351..878
                     /locus_tag="VFD73_00595"
                     /inference="COORDINATES: protein motif:HMM:NF015648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HZI72529.1"
                     /translation="MRLVPNTDTVPASVNRYLLPHERQVITVHQHPAVLIRPIFEVLI
                     GLAIAGWLTVAFAKNNGVAVLIIWIIWGLVFLRLVIKVIEWGETYFVVTSQRFLLATG
                     LVTRKVNMMPLAKVTDMSFQRSAMGRLLGYGEFILESAGQDQALNKVDHLPYPEQLYL
                     EVCGLIFKDTGDSGD"
BASE COUNT          191 a          352 c          319 g          209 t
ORIGIN      
        1 ggcggccatg tccggtcacg cactgttttc accgatgggg catactggag accggcacgg
       61 ggcatactca tgccggcgcg gcagcttcac tccgttagca ttggccggga aatcggcgag
      121 agctagcata ggttcactga cagatccgac aagtctgggc gcccgtggga ggcgacgtga
      181 acgctaagac cctcatggga tgggtcgcaa ttgccttcgt cgtatggtgg gtcatcgagg
      241 agcccgctgc cgccgctcat ctcgtccaca acatcggggc gttcctgtcc acggcggccc
      301 acagcctctc cagcttcgta tcgtccatct aagcaggata ggcactggta atgaggctgg
      361 ttccgaacac tgatacggtt cctgcctcgg taaacaggta cctcctgccg cacgagcgcc
      421 aggtcatcac ggtccatcag caccccgccg tactgatcag acctattttc gaagttctca
      481 tcggactggc cattgccggg tggctgacag tcgccttcgc caagaacaat ggcgtggccg
      541 tgctcattat ctggatcatc tggggacttg ttttcctccg tttggtcatc aaggtcatcg
      601 aatggggcga aacttatttc gtcgtcactt cccagcggtt cctgctcgcg accggcctcg
      661 tgacccgcaa ggtgaacatg atgccgctgg ccaaggtgac ggacatgagc ttccagcggt
      721 ccgcgatggg ccggctcctc ggttacgggg agttcatcct ggaatccgcg ggacaggacc
      781 aggccctcaa caaggtcgac cacctgccct acccggagca gctctacctc gaggtctgcg
      841 gcctgatctt caaggacacc ggcgacagcg gggactgatt ttccccgctc acctccgggc
      901 cccacccacc tccccattcc cccttcatgt cggcgccctt tggctcgcgg gggattagcg
      961 ggttagcagc accactccgg cggcggcgag cagcaggccc gcgcgctgga gccagcgcat
     1021 ccgctcgccg aggacccacc gggccagcag gacggtcatg cccgggtaca g
//
LOCUS       DASRPQ010000052         1326 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_319467, whole genome shotgun sequence.
ACCESSION   DASRPQ010000052 DASRPQ010000000
VERSION     DASRPQ010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1326
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_319467"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..563
                     /locus_tag="VFD73_00600"
     CDS             <1..563
                     /locus_tag="VFD73_00600"
                     /inference="COORDINATES: protein motif:HMM:NF014755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HZI72530.1"
                     /translation="FVEEKEIDPVYYERSYYLEPAERSEKPYALLLKALEKKGLTAIA
                     TITIRKKEQLCAIRVHEGTIMLETLFYPDEIRTERGTDPGNVKISDRELEMAFTLIDI
                     FRKPFDPSEYQDHYREALAELIEAKLEGKQVVKAPAARETRVIDLADALKKSVEAARK
                     DAAKPKPPARARTRAARPARRPRKVG"
     gene            560..>1326
                     /locus_tag="VFD73_00605"
     CDS             560..>1326
                     /locus_tag="VFD73_00605"
                     /inference="COORDINATES: protein motif:HMM:NF045432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72531.1"
                     /translation="MSQVVTEADAVLEQLEARDQKMLLRIDGHQLSVTNLDKVLWPGV
                     GRNKPLTKRDLLRYLTRVSPWLLPHLAGRPMFTTRFPDGIHGKSFYQKHWRPAPPFAR
                     TVTIFSSHNEGDSEYLICENLATLLFLAQMGGLELHPWFSRVDPAPDARGRSRTFSGS
                     EENLEKSVLNYPDFVIFDLDPYLYSGREGKGEEPELHRKAFSRTRSLALRLRDMLGRL
                     DLEIFVKTSGRTGLHLYLPLVRKFDYDAARNIAETIGR"
BASE COUNT          263 a          422 c          413 g          228 t
ORIGIN      
        1 cgttcgtcga ggagaaggaa atcgatcccg tctactacga gcgcagctac tatctcgagc
       61 cggccgagcg gtcggagaag ccctatgcgc ttctgctgaa agcgttggaa aagaagggtc
      121 tcaccgccat cgccaccatc accatccgca agaaagagca actctgcgcg atccgggtgc
      181 acgagggcac catcatgctg gagacgctct tctatcccga cgagatccgc accgaacgcg
      241 gcaccgatcc gggcaacgtg aagatctcag atcgtgagct ggagatggcg ttcacgctga
      301 tcgacatttt ccgcaagccg ttcgatccca gcgagtatca ggaccactac cgggaggctc
      361 ttgcggagct catcgaggcc aagctggaag gcaagcaggt ggtcaaggcg ccggcggctc
      421 gggagacccg ggtcatcgac ctggccgacg ccctgaaaaa gagtgtggaa gcggccagga
      481 aggacgcggc caaaccgaag ccaccggctc gcgcgcgcac ccgtgccgcc cggcccgcgc
      541 gtaggcctcg gaaggttgga tgagtcaggt agtgaccgaa gccgatgccg tgctcgagca
      601 gctcgaggcg cgggatcaga agatgctgct ccgcatcgat ggccatcagc tgtcggtcac
      661 caacctggac aaagtgctct ggcctggagt ggggcggaac aagccgctca ccaaacgcga
      721 tctgctccgc tatctcaccc gggtttcccc ctggctcctg ccgcacctgg ccggccgccc
      781 gatgttcacc actcggttcc ccgacggcat ccacggcaag agcttctatc agaagcactg
      841 gaggccggct cctccgtttg cccggaccgt cacgatcttc tccagtcata acgaaggcga
      901 cagtgagtac ctgatttgcg aaaatctcgc gaccctgctc tttctggcgc agatgggggg
      961 tctcgagctg cacccctggt tctcgcgggt ggatcccgcg cccgatgccc gcggccggag
     1021 ccgcaccttc tccggttcgg aggagaacct ggagaaatcg gtgctcaact atcccgattt
     1081 cgtgatcttc gacctcgatc cctatctcta ctccggacgc gaggggaagg gggaagagcc
     1141 ggagctccac cgcaaggcgt tcagccgcac tcgaagcctg gcgcttcggc tgcgggatat
     1201 gctgggccgg ctggatctgg agatcttcgt aaagacgtcg ggccgaacgg ggctgcacct
     1261 gtatctcccg ttagtgcgga agttcgacta cgacgccgct cgcaatatcg cggagacgat
     1321 cgggcg
//
LOCUS       DASRPQ010000053         1639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_6235, whole genome shotgun sequence.
ACCESSION   DASRPQ010000053 DASRPQ010000000
VERSION     DASRPQ010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6235"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..307
                     /locus_tag="VFD73_00610"
     CDS             <1..307
                     /locus_tag="VFD73_00610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72532.1"
                     /translation="QNDLAGEPRRAFQYWDKGQLAVIGRGRAVADIWKLHFGGFLAWL
                     VWTFVHIFFLIGFRNRILVMIQWAWSYLTYGRGARLITSETPCTVPPLPAVTAAPSR"
     gene            259..1245
                     /gene="queG"
                     /locus_tag="VFD73_00615"
     CDS             259..1245
                     /gene="queG"
                     /locus_tag="VFD73_00615"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0052693 - epoxyqueuosine reductase
                     activity [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HZI72533.1"
                     /translation="MHGSTAASGYRRTEQMTLTERVKARAQELEFIACGITHPGPTAH
                     ADELDAWLKNGYAGTMRYLHRQANRRKDPGLIAPEARSVVVVLDNYFTRDDESDLEAP
                     RIAKYARGEDYHRVTMDRLGTLAEFLKENGARLARSYADAGPVPERELAQRAGLGWIG
                     KNTMLVSPGIGSFFFIGSIFTDLDLDLDLSFELDRCGSCTRCIEACPTGALLQPRLLD
                     ATRCISYLTIEQKGPIPEELAREFRGYVFGCDICNDVCPWNVRFASETAVPEFRATRP
                     VVESDPDFFETMSEEEFTRRYDGSPLDRAGLEGMRRNYRAAFSDREPRLLPR"
     gene            1242..>1639
                     /locus_tag="VFD73_00620"
     CDS             1242..>1639
                     /locus_tag="VFD73_00620"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI72534.1"
                     /translation="MTQLLDRLVHYDLWANRETLQSLRQGAPTARSLRWMAHIIGAEF
                     LWLDRIDGRPASLPVWPTLSLDQCAERLEQLSSLLPRAARTDQLARAVHYTNSKGEPW
                     TSSVEEILTHVTVHSAYHRGQIASDVREAG"
BASE COUNT          290 a          526 c          514 g          309 t
ORIGIN      
        1 tcagaatgac ctggctggag agccgcggcg cgcatttcag tactgggaca aagggcagct
       61 cgccgtgatc ggccgcggcc gggcggtggc cgacatctgg aagctgcact tcggcggctt
      121 cctcgcatgg ttggtctgga ctttcgtgca catcttcttt ctcatcgggt tccgcaaccg
      181 gatcctggtg atgattcaat gggcctggtc ctatctgacc tatggccgcg gcgctcgcct
      241 catcaccagt gagacgccgt gcacggttcc accgctgcca gcggttaccg ccgcaccgag
      301 cagatgacgc ttacggagcg agtgaaggct cgggcccagg agctcgagtt cattgcctgt
      361 ggtatcaccc atccagggcc gaccgcccac gccgacgagc tggatgcatg gctgaagaac
      421 ggatacgccg gcaccatgcg gtacctgcat cgccaggcga accgccggaa ggaccccggt
      481 cttatcgcac ctgaggctcg ctccgtggta gtcgtgctcg acaactactt caccagagat
      541 gacgagtcag acctcgaagc cccccgcatc gcgaaatacg ccagaggaga ggattaccat
      601 cgcgtcacca tggaccgtct cggaacgctg gcggagtttc tgaaggagaa tggcgcccgc
      661 ctggcgcgga gctatgccga tgctggtcca gtgccggaac gtgagctcgc gcagcgggcc
      721 ggtctcggct ggatcggcaa gaacaccatg ctggtgagcc ccggcatagg gtcgttcttt
      781 ttcatcgggt cgatcttcac cgatctggac ctcgatctcg acctgtcctt cgagctggac
      841 cgctgcggca gctgcacccg ctgcatcgag gcgtgcccca ccggcgcctt gctgcagcct
      901 cggctgctgg atgccacccg ctgtatctcc tatctcacga tcgagcagaa gggaccgatt
      961 ccggaagagc ttgcccggga gttccgcggc tacgtcttcg gctgcgacat ttgcaacgac
     1021 gtctgcccct ggaatgtgcg gttcgccagc gagaccgcgg ttccggaatt ccgagccacc
     1081 cggcctgtgg tcgagtccga tccggacttt ttcgagacga tgtcggagga ggagttcacc
     1141 aggcggtatg acggatctcc gctcgaccga gccggcctgg agggaatgcg gcggaattac
     1201 cgtgcagcgt tctcagatag ggaaccgagg cttttgccga gatgacacaa ctgctggacc
     1261 ggctcgtgca ttacgacctg tgggccaacc gtgagacgct gcagtcgctg cgccaaggcg
     1321 ctcctactgc ccggagcttg cgctggatgg cccacatcat cggggccgag ttcctttggc
     1381 tcgaccgcat cgatgggcgc ccagcgtccc ttccggtttg gcccactctc agcctggacc
     1441 agtgcgccga gcgactggag caactatcca gtcttctgcc gagggccgcg cgtaccgacc
     1501 agctggcccg agcggtccac tacaccaaca gcaagggaga gccctggacc agctcggtcg
     1561 aggaaatcct tactcacgtg acggtgcatt ccgcctatca tcgggggcag attgcctccg
     1621 atgttcggga agccgggca
//
LOCUS       DASRPQ010000054         1150 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1260229, whole genome shotgun sequence.
ACCESSION   DASRPQ010000054 DASRPQ010000000
VERSION     DASRPQ010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1260229"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(44..355)
                     /locus_tag="VFD73_00625"
     CDS             complement(44..355)
                     /locus_tag="VFD73_00625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72535.1"
                     /translation="MSKSFRTRFIRLGEDFYIAFLYGDVPDETEFLRSARAVWLELKS
                     DNVKEVSRKILASGLVRKLEIPDPHLYLQAPGGQCLRLVGIDEDLSFYRGPEKARTWE
                     R"
     gene            421..741
                     /locus_tag="VFD73_00630"
     CDS             421..741
                     /locus_tag="VFD73_00630"
                     /inference="COORDINATES: protein motif:HMM:NF013844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HZI72536.1"
                     /translation="MGKRGRGRHPVFDSSDSLLDARAEAELDLHGLSAPEAQVAVRTF
                     LESWQRRKAGAVVLIITGKGKGSPNGPVLRGLVKNLLQGELYALVKESRLDDGEGGYR
                     VKVR"
BASE COUNT          224 a          339 c          385 g          202 t
ORIGIN      
        1 gcacccagcg gaggtcagga agccattttt gtgagtgcgt cttttacctt tcccatgtcc
       61 gggccttctc cggcccccta tagaaggaga ggtcctcgtc gattccgact aaccggaggc
      121 attgacctcc cggagcctgg aggtaaaggt gcgggtccgg tatctcgagc ttcctcacga
      181 gaccagacgc gaggattttt cggctcactt ctttcacgtt gtcggacttg agctccagcc
      241 acacggctct cgcactacgt aagaactcgg tctcatctgg gacatcacca tagagaaacg
      301 cgatatagaa gtcctctccc aaccgaatga accgggtccg gaaggatttg ctcaactatt
      361 gtgaacggga tacgtgggcg atggtaaagt tgctggagaa gctggaggag ctggtcagga
      421 atgggtaagc ggggaagggg tcggcatcct gtctttgact cgagcgactc gctgctggat
      481 gcgcgcgcag aggctgagct ggaccttcac ggcctcagtg cgcccgaagc gcaagtggcg
      541 gtgcggacct tcctcgagag ctggcagcgg cgcaaggccg gcgctgtggt cctcatcatc
      601 acgggcaagg gaaagggctc tccgaacggc ccggtgctcc gcgggctggt gaagaacctg
      661 ctgcaggggg agctgtacgc gctggtgaaa gaatcgaggt tggatgatgg ggagggaggg
      721 taccgggtga aggttcggta gcgactatct cagcaacctc accacgccga acaccagccc
      781 caagcgcggg ggaggccgtt tcctcgcgac aacggctcgc cggccgcgcc aaccaagcgg
      841 ccacgtcttt aggtcccatc ccatacccgc cccccggccg cgcttgccgg ccgagcaggt
      901 cgtcggacca gagggcgagg tgcaagggcc ccgaatcccg aagaacgaca tcctgatgct
      961 ccgactgacc ttccccgaat tccgggggta ttcaccctga acggacgccg ctcagcctga
     1021 gttgtcgcag gcgaggtgcg caacgggcgg gatccgtcgc aggacccggt aggtagcccg
     1081 gggtgggtat ggtttcgcag gaagcgaacg cgcaaggcga ttcgcgagcg gccgcagccc
     1141 cggacggggg
//
LOCUS       DASRPQ010000055         1928 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2200274, whole genome shotgun sequence.
ACCESSION   DASRPQ010000055 DASRPQ010000000
VERSION     DASRPQ010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1928
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2200274"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1227)
                     /locus_tag="VFD73_00635"
     CDS             complement(<1..1227)
                     /locus_tag="VFD73_00635"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HZI72537.1"
                     /translation="MARELPAQHAAQPPRILDDIKFLTDDRLQGRATGSPGADSAAAY
                     LARRFSQVGLQPAAGGWFQSFTIGRDAPAITSGGVTALSGKNVIGILPGRDPVLRNQT
                     VILGAHYDHLGLGGFGSLDPDSTGRVHNGADDNASGVAAVIQVAARLAASPPARTVVF
                     IAFSGEELGLLGSAYYVKQPIYPLTGTLAMINLDMVGRLRNGHLIVYGVQSAKQFPAL
                     LDSLNWYAGFDLKAQGDGYGPSDQSSFYAAKRPVLHLFTDLHEDYHRTTDDWEKINLD
                     GLKRVADFTLGLVTALANRRTPLTFMEAAPAFPPRNSTAAVSSPGYGAYLGTVPDMTG
                     APGGVRLVGVRAGSPAEQAGLRGDDIITRIGSMETPDLQAMTEALRSHQPGDTVTIVV
                     RRGAALTTLRARLGTRG"
     gene            complement(1297..>1928)
                     /locus_tag="VFD73_00640"
     CDS             complement(1297..>1928)
                     /locus_tag="VFD73_00640"
                     /inference="COORDINATES: protein motif:HMM:NF017181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HZI72538.1"
                     /translation="AETRVRIGDPGVLAAGVIEFPNGRLVSRSIDNRIGAFVVLEALR
                     LLAGNRQQGTVTAVATTREEIAATGGGARSSANRLEPDVALVVDVTHATDYPGVDKRK
                     HGDYRLGGGPAISRGASVSEIVFDLLIETAEAERIPYRIEAASRDTHTDAEAIFNAHR
                     GVATGLVSVPNRYMHSPNEMVALEDLDRTARLLAAFARRLRPDTSFIPQ"
BASE COUNT          356 a          609 c          632 g          331 t
ORIGIN      
        1 gccccttgtg ccgagacggg cgcgcagagt cgtcaacgcc gcgccccgac gcaccacaat
       61 ggtgacggta tcgccaggct gatggctacg gagcgcttcc gtcatggcct ggaggtcggg
      121 cgtttccatg ctgccgatgc gggtgataat gtcgtctccc cggaggcccg cctgctccgc
      181 cggactgccg gcccgtacac cgaccagacg tacgcctcca ggtgcgccgg tcatatcagg
      241 aactgttccc aggtacgcac catagcctgg cgacgagacg gcggccgtcg aattacgtgg
      301 tgggaatgcg ggcgcggcct ccatgaacgt cagaggtgtg cgacgattcg ccagcgcagt
      361 caccagtccg agagtaaagt ccgcaacgcg tttgagacca tccaggttga tcttttccca
      421 gtcgtcggtg gtgcggtgat agtcctcatg cagatcggta aagaggtgga gcacaggtcg
      481 cttggcggcg tagaaggagg actggtcact gggtccgtaa ccgtcaccct gggctttgag
      541 gtcgaaacca gcgtaccagt tgagcgagtc gagaagggcg gggaactgtt tcgcactctg
      601 cacgccgtat acgatcaggt gcccgttccg aagccggccg accatgtcga gattgatcat
      661 ggccagcgtg ccggtaagcg gatagatcgg ctgcttgaca tagtatgccg agcccaggag
      721 gcccagctcc tcgccgctga aagcaatgaa gacgacggtg cgagccggcg gagatgccgc
      781 aagccgagcg gccacctgaa tcaccgcggc aaccccggac gcgttgtcgt cggcaccgtt
      841 gtgcaccctc ccggtgctgt ccggatcgag gctgccgaag ccgccgagtc cgagatgatc
      901 gtaatgggcg ccgagaatca cggtctgatt gcggagcacg gggtctcgcc cgggaaggat
      961 gccaatcacg ttctttcccg agagcgcagt gacgccgccc gatgtgattg cgggcgcgtc
     1021 ccgaccgatg gtgaacgact ggaaccagcc gcccgctgcc ggctgcaggc cgacctggga
     1081 aaagcggcgc gcgagatagg ccgccgccga gtccgcgccg ggagagccgg tggcccgccc
     1141 ctgaagacga tcgtcggtca ggaacttgat gtcgtcaaga atccggggag gctgggcagc
     1201 gtgttgcgcc ggaagctctc tcgccatcca tccggacatc agcactaccg ccgcaagtat
     1261 ccgcaacata ggaggaggat agcagaatgg acgctgctat tgggggatga aactcgtgtc
     1321 cggccggagt cgccgggcaa acgccgccag cagcctggct gtgcggtcga gatcctccag
     1381 tgcgaccatc tcgttcggac tgtgcatgta gcggttcggc actgagacaa gtccggtggc
     1441 aacacctcga tgggcgttga agattgcctc tgcatcggtg tgggtgtcac gtgacgctgc
     1501 ctcgatgcgg taggggatcc gctccgcctc cgctgtctca atcagcaggt cgaagacgat
     1561 ctcactcacg gaggcgcccc gggaaatggc tggcccgccg cccagtcggt aatccccgtg
     1621 cttccgcttg tccacgccgg ggtagtcggt ggcgtgagtg acgtcgacca ccagggccac
     1681 atcaggctcc agccggttgg cggacgatct cgcaccacct ccagtggcgg cgatctcctc
     1741 tcgagtagtg gccaccgccg tgacggtacc ctgctgccgg ttccctgcaa gcaacctgag
     1801 cgcctcgagc acgacgaacg cgccgatccg attgtcgatc gaacggctca ccagccggcc
     1861 attgggaaac tcgatcactc ccgccgccaa gactccggga tcgccgatcc gaacccgtgt
     1921 ctcagctt
//
LOCUS       DASRPQ010000056         1297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_946210, whole genome shotgun sequence.
ACCESSION   DASRPQ010000056 DASRPQ010000000
VERSION     DASRPQ010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_946210"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1029
                     /locus_tag="VFD73_00645"
     CDS             <1..1029
                     /locus_tag="VFD73_00645"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HZI72539.1"
                     /translation="IFTQRWLCVGRADRIANPGDYVLQPVGNESIIVLRDRSGGVRAY
                     YNVCRHRGTRLCEEASGRFSETIQCPYHAWTYALDGRLIGAPSSGEIEGFTKADYPLH
                     RVAVEQWEGFLFINLAEEPEPFASAYARLLGRFSRFNLPALAVARTLEYEVRANWKLL
                     FQNYSECYHCGPVHPPLAKLTPPTSGENDLVDGPFTGGFMVINEGHQSLTMSGRSCGL
                     MVGDLPKEDLNRVYYYAIFPNMLLSLHPDYVMFHTLWPEAPDRTRIFCSWLFNPDSLT
                     DPACNPDDGIEFWDMTNRQDWHICEQSQLGVQSRAYEPGPYSKRESLSVQFDREVLRA
                     LGHRAPVS"
     gene            complement(1022..>1297)
                     /locus_tag="VFD73_00650"
     CDS             complement(1022..>1297)
                     /locus_tag="VFD73_00650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72540.1"
                     /translation="LMFASMIRLQREPAPAGTLRVPGGRWGATTLAGVGLVTTSISIV
                     LALVPAEDESHKTLAVVKVAGLTLLLLGLGAWLYYLADFRRSSGDLS"
BASE COUNT          256 a          414 c          387 g          240 t
ORIGIN      
        1 atctttaccc aacgctggct ctgcgtcgga cgggcggacc gcattgccaa cccaggcgac
       61 tacgtgctgc agccggtcgg gaacgaaagc attatcgtct tgcgagatcg cagcggcggt
      121 gttcgggcgt attacaacgt ctgccggcac cgcggtaccc gcctgtgtga ggaggcaagc
      181 ggacgattct ccgagacgat ccagtgtccc taccatgcct ggacctacgc gctcgatggc
      241 agactgatcg gcgctccatc gtccggcgag atcgagggat ttaccaaggc cgactacccg
      301 ctgcaccggg tagcggtgga gcagtgggaa ggattcctct tcatcaatct ggcagaggag
      361 ccggaaccct tcgccagtgc gtacgcgcgg ttgcttggcc gcttcagccg cttcaatctc
      421 cctgctctcg ccgtggctcg gacgctcgaa tacgaggttc gcgccaactg gaagcttctc
      481 tttcagaact actcggaatg ctaccactgt ggcccggtgc accctccgct cgcgaagctc
      541 acacctccga caagtggtga gaacgatctg gtggatggcc cgtttaccgg cggattcatg
      601 gtcatcaatg agggacacca gagtctcacg atgagcggcc gctcctgcgg cctcatggtg
      661 ggcgacctcc cgaaggaaga tctgaatcgg gtgtactatt acgccatttt ccccaacatg
      721 ctgctcagcc tgcatcccga ttacgtgatg tttcataccc tctggcccga ggcgccggat
      781 cggaccagaa tcttctgttc ctggctgttc aaccccgact cgttgaccga tcccgcgtgc
      841 aaccctgacg atgggatcga gttctgggac atgacgaacc ggcaggattg gcacatctgc
      901 gagcagagcc agctcggggt acagtcgaga gcctacgaac cagggcccta ttcgaagcga
      961 gaaagcctct cggtgcagtt cgatcgagag gtactgcggg ctctcggcca ccgagcgccg
     1021 gtcagctaag atcgccggac gagcgcctga agtcggccag atagtagagc caggcgccga
     1081 ggccaagcag gagaagcgtg aggcccgcga cctttaccac tgccagcgtc ttgtgcgact
     1141 cgtcttccgc gggcaccaga gccagcacaa tgctgatgct cgtggtaacg agacctacgc
     1201 ccgcaagcgt cgtggcaccc caacgcccac cgggcacccg aagcgtccct gccggtgccg
     1261 gctcgcgctg caaccggatc atcgaagcaa acatcag
//
LOCUS       DASRPQ010000057         1445 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2827806, whole genome shotgun sequence.
ACCESSION   DASRPQ010000057 DASRPQ010000000
VERSION     DASRPQ010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2827806"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1039)
                     /locus_tag="VFD73_00655"
     CDS             complement(<1..1039)
                     /locus_tag="VFD73_00655"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HZI72541.1"
                     /translation="MKAAVYYGPGDVRIENIREPGPPGPAEVVIQVKMGSLCGTDASQ
                     YKAATMVPLNGPHHVSGHSGPVILGHEVVGVVVAKGSEVSHLEIGQRVAPGAGWWCGE
                     CPRCKEGRINICENYYLYGIHANGGLAEFATFPAQMCIPVPAACSDEAAAMAQPCAVA
                     LHALARGGIGSDQTVALFGIGSIGTLLLAALQAQAAGRQHVIAIDVEQGRLATARQLG
                     AAAQINARMEDPVAVIAELTGRRGVDVAIDATGVPETIAEALAIVRRGGRLLQVGIPV
                     TPVTLVLDTAIVREKDIITTNGQVCTVDLPKALELLSTTDLARRIGYHVIRLDALVEE
                     GLVPLVEHRATA"
     gene            complement(1199..>1445)
                     /locus_tag="VFD73_00660"
     CDS             complement(1199..>1445)
                     /locus_tag="VFD73_00660"
                     /inference="COORDINATES: protein motif:HMM:NF036826.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72542.1"
                     /translation="EPGPITLMVQAEPDHYTFVVLGKSGEQQVLATGESPYLAPEVAS
                     PFTGVFFALYASGNGAATTAPSFFEWFDYRVAAQDSN"
BASE COUNT          263 a          466 c          419 g          297 t
ORIGIN      
        1 tcgccgttgc cctgtgttct accaggggca ccagcccctc ttccaccagc gcgtccagtc
       61 tgatgacgtg atagccgatg cgccgggcga ggtctgttgt ggagagaagc tccagcgctt
      121 tgggcagatc gacggtgcaa acctgcccgt tcgtcgtgat gatgtccttc tcccgcacga
      181 tcgccgtatc caggaccagc gtcaccgggg tcacgggaat gccgacctgg aggagacggc
      241 cgcctcgacg tacgatggca agcgcctctg cgatcgtctc ggggacgccc gtcgcatcga
      301 tggcgacatc aactcctcgc ctgccggtca actcagcaat gacagcaaca ggatcctcca
      361 tacgggcgtt gatctgggcg gccgcgccca gctgtctggc agtagcaagc ctgccctgct
      421 caacgtcgat ggcgatgacg tgctgcctac cagccgcctg agcctgtaaa gcggccagga
      481 gcaaggtccc gatactgcca atgccgaaga gcgcgacagt ctggtcgctg ccgattccac
      541 ctctcgccag ggcgtgaaga gctacggcgc acggctgggc catcgccgca gcttcatcgc
      601 tacacgcggc gggaacgggg atgcacatct gcgccgggaa tgtagcgaat tcggcaaggc
      661 ccccgttcgc atgaataccg tagaggtagt agttttcgca gatgttgatg cgcccctctt
      721 tacacctggg acactcccca caccaccatc cggcaccggg agcgacacgc tgcccgatct
      781 caaggtggct tacttctgag cctttcgcta ccacgactcc gaccacctcg tgtccgagga
      841 tgacgggacc agagtgacca ctgacgtggt gcggtccgtt gagaggaacc atcgtcgccg
      901 ccttgtactg gctggcgtct gttccgcaca gggagcccat cttcacctgg atgaccacct
      961 ctgctggccc aggcggccct ggctcgcgga tattctcaat cctcacatct cccggtccgt
     1021 aatacaccgc tgctttcatc gcctcgctcc tttcttgttg ccggatagtc agtttgcttc
     1081 ctctgataaa tgtcatccaa gcagtcccaa cggctcctcc ataaggtccg ccagtgtggc
     1141 cagaaattgt gctcatcgtg ctccatcaca tagttgattc ctttctggcg ctatgacgtc
     1201 agttgctgtc ttgcgcagca acgcggtagt cgaaccactc gaagaacgag ggcgcggtgg
     1261 ttgctgcgcc gttgccactg gcgtagagcg cgaaaaacac gcctgtgaat gggctggcca
     1321 cctctggggc caggtagggt gactcgccgg tcgcgaggac ttgctgttca ccgctctttc
     1381 ctaagacaac gaaggtatag tggtccggct cagcctggac catgagcgtt atcggtcccg
     1441 gctcg
//
LOCUS       DASRPQ010000058         1206 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_6334, whole genome shotgun sequence.
ACCESSION   DASRPQ010000058 DASRPQ010000000
VERSION     DASRPQ010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1206
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6334"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..301
                     /locus_tag="VFD73_00665"
     CDS             <1..301
                     /locus_tag="VFD73_00665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72543.1"
                     /translation="CEPPGCGYVAGVSGKLAPLIALQFRRLGAQRSRVPVAAVILNWL
                     ATQQDGTYADARTPDLRVPNEHMDRERSQIYRICARKERHRYAQPSLPNGGSRSD"
     gene            359..>1206
                     /locus_tag="VFD73_00670"
     CDS             359..>1206
                     /locus_tag="VFD73_00670"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase domain-containing protein"
                     /protein_id="HZI72544.1"
                     /translation="MADSGGAFVIDHGPDARYRIGHQDNSRWDGFVFRPGDIVISTRS
                     RSGTTWMQMICALLIFQTPDLPAPLAEMSPWMEWLPLDREELLAGLAAQKHRRFIKTH
                     TPLKGLPLDPRVTYVVVARHPLDMAVSLYHHYANLDARRLNELAGYPETGTPEPLPPL
                     REWLLSWVAQDCDPYQRLDSLAGVMHHVADAWSRRAEPNVILVHYDDLAGDLEGQMRQ
                     LAERLGIAVPASLWPELVSAATFHGMRSRAERLTPGPPGLFLDDTAFFRNGRSGTGNA
                     ILTPEEL"
BASE COUNT          202 a          417 c          367 g          220 t
ORIGIN      
        1 gtgcgagcca ccaggctgcg gctacgtcgc cggtgtcagc ggaaagcttg ctccattgat
       61 agcactgcag ttccggcgtc ttggcgctca gcgttcccgc gtgcctgtcg ccgctgtgat
      121 cctcaactgg ctagctaccc agcaagatgg aacttacgcc gacgcccgaa cgccggacct
      181 ccgggtccct aatgagcaca tggaccgtga acgcagccag atctaccgga tctgtgcccg
      241 caaggaacgg catcgttatg ctcagccttc cctaccgaac ggcggttccc gctcagattg
      301 agctcgcagt ccgtaactgc ccgcgacctt cctgtccgcg aagatatagt cttcgcgcat
      361 ggctgactcc ggcggcgcgt tcgttatcga tcacgggccc gacgctcggt accggatagg
      421 ccaccaggac aactcgcgct gggacggatt cgtgttccgt ccgggtgaca tcgtgatcag
      481 cacaaggtct cgcagcggaa cgacatggat gcagatgatc tgcgcgctgc tgatcttcca
      541 gaccccggac ctccccgccc cgctcgctga gatgtcgccc tggatggagt ggctgccgct
      601 cgaccgggag gagctgctag ccggactcgc cgctcagaag caccggcgat tcataaagac
      661 ccacacgccg cttaagggcc tgccgctgga tccgcgggtc acctatgtcg ttgtggcccg
      721 gcatccgctg gacatggcgg tatcgctgta tcaccactac gccaatctcg atgcgcggcg
      781 cctgaacgag cttgcgggct accccgagac gggcacacca gagcccttgc ccccgctgcg
      841 ggagtggctg ctctcctggg tcgctcaaga ctgcgacccg taccagcggc tcgattctct
      901 cgccggggtg atgcaccacg tcgctgacgc ctggtcgcgg cgggccgaac ctaacgtcat
      961 cctggtgcat tacgacgatc tggccggtga tctcgagggg cagatgcggc agctggccga
     1021 gcgcctgggc atcgcggttc cggcatcgct gtggccggaa ctcgtgagcg cggccacctt
     1081 tcacggcatg cgctcccgcg ctgaacgcct cactcccggt ccgccaggac tcttcctgga
     1141 tgacaccgcc ttcttccgga acggccggtc gggcaccggc aacgcgatac tgacccccga
     1201 ggaact
//
LOCUS       DASRPQ010000059         1621 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_633664, whole genome shotgun sequence.
ACCESSION   DASRPQ010000059 DASRPQ010000000
VERSION     DASRPQ010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1621
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_633664"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1335)
                     /locus_tag="VFD73_00675"
     CDS             complement(<1..1335)
                     /locus_tag="VFD73_00675"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72545.1"
                     /translation="MVSLALLLGGPSQERGISLNSARSVADHLVGTDVQLKEVIYFDR
                     RLRAYSISRSLLYCNTPSDFDFKLTLDGSALTEEELVARLQGVDFIFPAIHGAFGEDG
                     QLQALLESAKVPFIGTGASACQVAFDKFRATDTLRTAGIGAVPGVLVTSQQSAAERAR
                     ALLGAFPEAAKVVIKPAQGGSSIDVHVLSDRSAGVGIVEGMIGRYSRVVIQPWITGTE
                     MTTIVMQGPSGPVALIPLQIELRNRLSDNDIFDYRRKYLASNDSHYYCPPAQDVAVIK
                     EIQRVSERAFSLLGLRDFARIDSWLRPDGEILVSEINPISGMEQNSFLFISAAQLGMS
                     HADILKFVVRTAARRIGIEWAGRSPVDAGVPPARQRVGVLFGGETAERQVSVLSGTNV
                     WLKLLGSRRYLPVPYLLDPDGSVWQLSYSAALRHSVEEIVESCRDAQRLDDVR"
BASE COUNT          334 a          500 c          507 g          280 t
ORIGIN      
        1 gcggacgtcg tcgagtcgtt gcgcgtcccg gcaggattcc acgatctcct cgacggagtg
       61 gcgcagcgct gccgagtacg acagctgcca tacagagcca tcggggtcca gcaggtaggg
      121 caccggcagg tagcgccgcg agccgagcag cttcagccag acgttggtgc cggacaggac
      181 cgaaacctgc cgctcggcgg tctcgccgcc gaacagtacc ccgacacgct ggcgcgccgg
      241 gggaacgccg gcatcgaccg ggctccggcc agcccactcg attccgatcc tcctggccgc
      301 ggtccggacg acaaacttca ggatgtccgc atggctcatc cccagctgcg cggcggagat
      361 aaagaggaag ctattctgtt ccataccgct gatggggttt atctcggaga caagaatctc
      421 gccgtccggc cgtagccagc tgtcgatcct ggcaaagtcc ctgaggccaa gcagtgagaa
      481 cgcccgctca gagacacgct ggatctcttt gatgaccgcc acgtcctgcg cgggcgggca
      541 atagtaatgc gagtcgttgc tggcaaggta cttacgccgg taatcgaata tatcgttgtc
      601 gctcaaacga ttcctcagct caatctgcag gggaatcaaa gcaaccggcc cggacggccc
      661 ttgcatgacg atcgtggtca tctcggtgcc ggtgatccac ggctggatga cgacgcggct
      721 gtaccggccg atcatgcctt cgacgatgcc aactcccgcg cttcggtcgg acaggacatg
      781 aacatcgatg ctggacccgc cctgagcagg cttgatgaca accttggcgg cttcggggaa
      841 ggcgccgaga agcgcccggg cgcgttcggc ggctgactgc tgcgatgtga ccaagacgcc
      901 gggaacggca cctatgccgg cggtccgcag tgtgtctgtc gcccggaact tatcgaacgc
      961 cacctggcag gcgctggcac cggtcccgat gaacgggacc tttgccgact cgagcagtgc
     1021 ctggagttgc ccatcctcgc cgaaggcgcc gtggatggcc ggaaagatga aatccacgcc
     1081 ctggagccgg gcaacgagct cttcctcggt gagcgcgctg ccatccagcg tcagcttgaa
     1141 gtcgaaatcc gagggagtat tgcagtacag gaggctccgc gaaatggagt acgcgcgcag
     1201 gcggcgatcg aagtaaatga cctctttaag ttgtacatcc gtacccacga gatggtcagc
     1261 gacggaacgt gcggagttga gagagatacc tcgctcctgc gagggaccgc cgagcagcaa
     1321 cgcaagcgat accatcaatg tcccacttat cttttggcaa gtatttaaag gataccagta
     1381 gaactcaatt cccccgtggg aggcctgcga ggcgaccgtg ccccgtcaag cttgactgcg
     1441 tgtagcatag gcgatccgcg gacagtacga gccccgtgga acaaaacggt tgccaggcgt
     1501 gacggcagcc ccggtaggct gcggtttgct agatgcccgc agcggagacc ggcggctcac
     1561 ctgatagctt caagatcacc tctgcccgca acttcaaccc gcgaagtatt taaggcgcag
     1621 a
//
LOCUS       DASRPQ010000060         1438 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2517924, whole genome shotgun sequence.
ACCESSION   DASRPQ010000060 DASRPQ010000000
VERSION     DASRPQ010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1438)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1438)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1438
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2517924"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(235..708)
                     /locus_tag="VFD73_00680"
     CDS             complement(235..708)
                     /locus_tag="VFD73_00680"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZI72546.1"
                     /translation="MGRRRRLAGAPGRGTLEKDKPPILGLIQRGGPVVLRMLANVQQI
                     TIQPIIAATIAKGALVHTDEYGVYARLPAWGYRHKTVCHAQGEYARDEDGEGFCEVHV
                     NTIEGFWSLLRSWLRPHRGISQDKLPDYLGFFQFVHNARRRGKALLAALVAALVV"
     gene            complement(660..1178)
                     /locus_tag="VFD73_00685"
     CDS             complement(660..1178)
                     /locus_tag="VFD73_00685"
                     /inference="COORDINATES: protein motif:HMM:NF024170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZI72547.1"
                     /translation="MPASDLVNLSGLLDDAKCFALVRQLRWPEGMRCLGCGRDAVIRD
                     GCDDTQPHRQRYRCKACAGRFDDLTGTALAGHHQPLRVWVLCLYLMGLNLSNRQIAAE
                     LGLNASDVQAMTEQLRRGLVAEAAAVRLEGEVEIDEVYVVAGHKGQPAAVAKRGGSDA
                     VAGWQVHRAGAR"
BASE COUNT          243 a          473 c          465 g          257 t
ORIGIN      
        1 cactcaggcc gatcaaggct ggggaagaga aaaggggtcg cgagctctcc aactctgcct
       61 ctcgaaggat gcacccgaga ccggccaggc gaaccgagat cggctcaccg gcacgagatc
      121 ttgcattcgt ggaggaaagg gcaatgcgcg tcatcgtact cggtagcggc atcgtcggca
      181 cgagcacagc ctattacctt aggctcttgt tggcttgcgg ggtgttggtc tgggtcatac
      241 gaccaaggcg gcaacgagtg cggcgagcag ggctttgccg cgacggcgtg cgttgtgcac
      301 gaactggaag aagccgaggt agtccggcag cttgtcctgc gagatcccgc ggtgcgggcg
      361 cagccaggag cgcagcaggg accagaaccc ctcgatggtg ttgacgtgca cctcgcagaa
      421 cccctccccg tcctcgtcgc gggcgtattc accctgtgcg tggcagaccg tcttgtgccg
      481 gtagccccag gctggcaggc gggcgtagac gccatactcg tcggtgtgga cgagggcgcc
      541 cttggcaatt gtggccgcga tgatcggctg gatcgtgatc tgctgcacgt tggccagcat
      601 gcgcaggaca accgggccac cgcgctggat caggccgagg atgggcggct tgtctttctc
      661 tagcgtgccc cggcccggtg cacctgccag cctgcgacgg cgtccgatcc gccccttttg
      721 gccacggccg cgggctggcc cttgtgcccg gccaccacgt agacctcgtc gatctccacc
      781 tcgccttcca gcctcaccgc cgctgcctcg gcgaccaggc cacggcgcag ctgctccgtc
      841 atggcctgca cgtccgaggc gttcaagccg agttctgccg cgatctgccg gttcgagagg
      901 ttcaggccca tgaggtagag gcacagcacc cacacccgca gcggctgatg gtgcccggcc
      961 agcgccgtgc cggtaaggtc gtcgaagcgc ccagcgcatg ctttgcagcg ataccgctgc
     1021 cgatggggtt gggtgtcgtc gcacccgtcg cggatcaccg catcacggcc acacccgaga
     1081 cagcgcatgc cctccggcca gcgaagctgg cgcaccagcg cgaagcactt ggcgtcgtcc
     1141 aacagccccg agaggttgac caggtcggat gcaggcatga tcgctagggc tccttgcatg
     1201 aagacggcag ccgcccatca tccgatcaga agtctcgcgc gacggctacc cgctcccctt
     1261 ccgctcatca ccccggaagc caacaagagc ctctcggatg agccttggcg agcagatata
     1321 tggggagttt gcgtcacgat ttcaataggt taggcctgca tctcgcctcg gaaccgacct
     1381 gtgtttttcg gtgttgatcc tatgcaggtt cggcatgtgc ctcgccggct ggcctgat
//
LOCUS       DASRPQ010000061         1028 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1573305, whole genome shotgun sequence.
ACCESSION   DASRPQ010000061 DASRPQ010000000
VERSION     DASRPQ010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1573305"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            210..>1028
                     /locus_tag="VFD73_00690"
     CDS             210..>1028
                     /locus_tag="VFD73_00690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72548.1"
                     /translation="MGIRRTVVPYGRLAMRGAKLAAARGQQQGVQVLSFEQLVTRLAG
                     GFARPIDPDTLKQVLREALPTAPLGELDPIKALPGMAGAAAETLSKAWRAGIDLDQRA
                     SGQDRIRSIALLERAVLERLPPSMKRPMDLVAAAMKRLAHAPAVLGPVEIVGLTELSP
                     CWRPLLLALAHHIPVLWNAGPRFVPTWLSGSKVIVQQSQATNPEITVVSAATALHEAI
                     EALRWARDLVSSGRAQPSEIGITACQTADYDDAFVTLRAEGDLDFRFVHGIPAAA"
BASE COUNT          165 a          345 c          318 g          200 t
ORIGIN      
        1 cccatcaccg gggaaggtcc ggaatgggtt agccttcgcg caggttggta taagtggttt
       61 ttcagagata agttcatctt tcgttccggt cgctgctgcc gcggttgtag tctagtgagc
      121 gttctcgcga gaatgccacc catggactgc tggctgtgct tggacatcaa aacgatctcg
      181 gagcggaact tcgctcccaa ggggccggga tgggcattcg tcgaaccgtc gttccgtatg
      241 gccggctcgc catgcgcgga gccaagctcg ccgcggcccg cggacagcag caaggcgtcc
      301 aggtcctttc ctttgagcag ctcgtcacgc gtttggcggg aggctttgcc cggccgatcg
      361 atcccgacac cctgaaacag gttctgcggg aggctctccc gaccgccccc ctcggcgaac
      421 tagacccgat caaggccctc ccgggcatgg ccggggcagc ggccgaaacc ttgtccaagg
      481 cttggcgggc cggcatcgac ctcgaccagc gcgcatcggg gcaggatcgc attcggtcca
      541 tcgctctcct ggagcgggcc gtcctcgagc ggctaccccc gtcgatgaag cggccgatgg
      601 acttggttgc cgcagccatg aagcggctcg cccatgcccc tgctgttctc gggccggtcg
      661 agatcgtggg tctcaccgag ctttcgccgt gctggcgtcc gctgcttctc gccctggccc
      721 accacattcc tgttctctgg aacgcggggc ctcggtttgt cccaacttgg ttgagcggct
      781 cgaaagtcat tgtccaacag agccaggcga caaatcccga aataaccgtt gtgagcgccg
      841 cgacagctct gcacgaggcc atcgaggcct tgcgctgggc ccgagacctc gtgtccagcg
      901 gacgcgccca accctctgag atcggcatca cggcctgtca gaccgccgac tacgacgatg
      961 cctttgtcac cctccgggca gaaggggacc tcgacttccg tttcgtgcat ggcatcccag
     1021 ccgccgcg
//
LOCUS       DASRPQ010000062         1970 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4394715, whole genome shotgun sequence.
ACCESSION   DASRPQ010000062 DASRPQ010000000
VERSION     DASRPQ010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1970
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4394715"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="VFD73_00695"
     CDS             complement(<1..263)
                     /locus_tag="VFD73_00695"
                     /inference="COORDINATES: protein motif:HMM:NF019499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin K epoxide reductase family protein"
                     /protein_id="HZI72549.1"
                     /translation="MRPVPPGWSYNPSSWSERVPLIALAVVGGVIATYLALYQTGVVN
                     SVWDPFFGSGSQTILKSSVSRILPIPDAALGALGYVLDAVSGA"
     gene            complement(260..1492)
                     /locus_tag="VFD73_00700"
     CDS             complement(260..1492)
                     /locus_tag="VFD73_00700"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HZI72550.1"
                     /translation="MQSDSDRVSRVMAALERSGLDGLVCSLPTNVLLLSGYWPVVGTA
                     IAMANRHGDTALVVPSDELELAERGWAQEIHIFESGSLQSMHRAIDGVRRPLVEALRA
                     LGLSRGRLGLESGPGFEPSSYAAMHFYGMSLRDLLWDLAALASTVPADSLLAELRSCP
                     TQGELERIGIACEIAEHAFQTGCQLIEAGQREYRVAAGFRRPLYDLVEETRVARADGY
                     AFCMSGPNSAHAHGAYARSTNRAVEVGDLLLVHCNSCADGYWTDITRTYCLGEPNDKQ
                     FRMYEAVLAAREAAFAAIAPGVVASEVDRAAREVLEQRGFGSAFKHPTGHGVGFAAID
                     HNAIPRIHPESADRLQPGMVFNVEPAIYLEGVGGMRHCDMVAVTEDGMELLTPFQSQT
                     TELTLAPNLAHTASEAHR"
     gene            complement(1482..>1970)
                     /locus_tag="VFD73_00705"
     CDS             complement(1482..>1970)
                     /locus_tag="VFD73_00705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72551.1"
                     /translation="EQSGQLIGVAREEYHSLGKLLLTFVLFWAYVAYSQLLIVWIADL
                     PKEVTWYVPRLRGSWGVLGLVLLGGQFLIPFLLLLFRRITTRSRALGWLGGWLLLMHY
                     LDVYWLVLPTLHPGGVRFHWLDLAGILLVGGFGVAYASRLRPEAFTAVLASRHAGESY
                     AV"
BASE COUNT          418 a          640 c          604 g          308 t
ORIGIN      
        1 atggcgccgc tcacggcatc cagtacatac ccgagggcgc ccagagcggc atcgggtata
       61 gggaggatgc gggagacgct cgacttgaga atggtctggc tgccgctgcc gaagaacggg
      121 tcccataccg aattcaccac accggtctga tagagggcga ggtaggtagc tatcacgccg
      181 ccaaccaccg ccagcgcgat cagtggcacg cgctctgacc aggaggatgg gttgtagctc
      241 catccgggag gcaccggtct catcgatgcg cttccgatgc ggtgtgggcg aggtttggtg
      301 ccagcgtcag ctctgtcgtc tgactctgga acggcgtgag cagttccatt ccatcctcgg
      361 tgacggcgac catgtcgcag tgcctcatac ccccgacacc ctcgagatag atcgccggtt
      421 cgacattgaa caccattcct ggttgcagcc gatcagcgga ttcggggtga atgcggggaa
      481 tcgcattgtg atcgatggcg gcaaacccaa cgccgtgtcc ggtgggatgc ttgaacgcgg
      541 aaccgaaccc tctctgctcg agcacctcgc gcgcagcccg gtccacttct gaagcaacaa
      601 cgcccggcgc aatggcggcg aatgccgcct cgcgagctgc cagcaccgcc tcatacatcc
      661 ggaactgctt atcattgggc tcgccgagac aatacgtgcg ggtgatgtcg gtccaatacc
      721 catcggcgca ggagttacag tgcaccagca gaagatcacc cacctcgact gcccgattgg
      781 tcgatctggc ataggcgcca tgggcatggg ccgagttcgg accggacatg cagaaggcgt
      841 agccatcggc ccgagctacc cgcgtttcct cgaccaggtc atacaacggc cggcggaatc
      901 ccgccgcgac ccgatactcc cgctgtccgg cctctattag ctggcagcca gtctgaaagg
      961 catgctccgc gatctcacag gcgatgccga ttcgctccag ctctccctgg gtaggacagg
     1021 agcgcagctc ggccaggagg ctgtcggctg gaacggtgga agccagcgcc gcgaggtccc
     1081 acagcagatc tcggagcgac atcccataga agtgcattgc ggcatagctg ctcggctcga
     1141 agccgggacc agactcgagg cccagccttc cccgactcaa tccgagtgct cgcagggctt
     1201 cgaccagcgg tcggcgcacg ccgtcgatcg cacggtgcat ggactgcagc gatcccgact
     1261 cgaagatgtg gatctcctgg gcccaaccac gttccgccag ctccagctca tctgacggca
     1321 ccacaagcgc cgtgtcgccg tggcgattgg ccatggcgat ggcggtacct accaccggcc
     1381 aatagccgct cagaagcagg acgttggtag ggagagagca gaccaggccg tcgagcccgc
     1441 ttcgctcgag cgcggccatg acccgggaca ctcggtcgct gtcagactgc ataggattcc
     1501 cccgcatgcc gagaagccag aacagcggtg aatgcctcag ggcgcagccg actggcatat
     1561 gccacgccga atccacccac cagcagaatt ccagccagat ccaaccagtg gaaccgcaca
     1621 ccaccgggat gaagcgttgg aagcaccagc caatacacgt cgaggtaatg catcaggagc
     1681 agccaaccgc cgagccaacc gagagcgcga gatcgggtgg tgatcctgcg gaagagcagc
     1741 agcagaaatg gaatcaggaa ctggcctccg agcaggacca gacccagcac gccccagctg
     1801 ccgcgcagcc gcggaacgta ccaggtgacc tctttcggca gatccgcgat ccagacgatc
     1861 aagagctggg agtacgcgac atacgcccag aacaggacga aggtgagcag cagcttgccg
     1921 agcgagtggt actcctcccg agcgacgccg atcagctgac ccgattgctc
//
LOCUS       DASRPQ010000063         2297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1887693, whole genome shotgun sequence.
ACCESSION   DASRPQ010000063 DASRPQ010000000
VERSION     DASRPQ010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2297
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1887693"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(41..838)
                     /locus_tag="VFD73_00710"
     CDS             complement(41..838)
                     /locus_tag="VFD73_00710"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HZI72552.1"
                     /translation="MTFALIPGPAGTLSIDDAPPAGRSDAMPVILVHSLAGNALQWSA
                     QLTHLQSTRRAVALELRGHGRSDPAKNGDYTLEGMANDIAAVVERLNLDRVVLVGHSL
                     GGGVALVYAGAHPERVAGLLLVDPIGDGKQISPAQAQPLLHALTTDYATTIHEYWKGI
                     AGNDPVVRQRLLADLDATPRQVVVRAFGEGLRFDPDPWLRAYHGPILSVVTPYNDQPF
                     SLHRLGKGFPHRVVSDTGHWIQLDAPDELNQIMDEFLEKSAAHPRLP"
     gene            complement(835..1422)
                     /locus_tag="VFD73_00715"
     CDS             complement(835..1422)
                     /locus_tag="VFD73_00715"
                     /inference="COORDINATES: protein motif:HMM:NF015319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HZI72553.1"
                     /translation="MNATTYCDFAPGHEWHGPYHDREYGFPLQEDAALFERLMLEINQ
                     AGLSWLTILKKREAFRRAYGGFDPEVVAAYGARDRRRLLAEAGIIRNRLKVEAAIANA
                     QKILELRTTYRSFDGWLAAHHPQSKEEWVKLFRKTFRFTGGEIVGEFLMSIGYLPGAH
                     ATSCPVYQRILTLRPPWLTTSSVAPPAPAGAREHG"
     gene            1450..>2297
                     /locus_tag="VFD73_00720"
     CDS             1450..>2297
                     /locus_tag="VFD73_00720"
                     /inference="COORDINATES: protein motif:HMM:TIGR02824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase"
                     /protein_id="HZI72554.1"
                     /translation="MIFEGAGGPEVITIGEVPKPEVKPEHIRVRVHAAGVNRADLIQR
                     RGHYPAPPGWPSNIPGLEYAGEVEAVRSGVTRWQIGDRVMGLVGGGAQAEMVVVHQDE
                     VLAIPDGLSYPEAAAIPESFLTAYDAIVTRGRLEAGERILIHAVGSGLGTAAAQIAKY
                     LGATVLGTSRSGDKLARALIYGLDVGIDTSRTAFPDAVGEPVHVILDVLGGTALADNL
                     AVLAPRGRLVLLGFLAGSQAEVDLAPILRKRLELIGTVMRTRGREERIPLIAEFAERM
                     LPLFES"
BASE COUNT          429 a          700 c          748 g          420 t
ORIGIN      
        1 cgtgaaggtg ggtgaacatc cgatcgaacc gtcagcggga ctacggcaac cgtgggtgag
       61 ccgcgctttt ctccaggaac tcatccatga tctgattcaa ttcatcgggc gcatccagct
      121 gtatccagtg accggtatcc gacaccactc gatgaggaaa cccctttccc aagcggtgca
      181 ggctgaatgg ctgatcgttg tacggagtga ccaccgacag aatcgggccg tggtaggcgc
      241 gaagccaggg gtcgggatcg aagcgaagac cttcgccgaa cgcgcgcacc accacctgcc
      301 ggggcgtggc gtccaaatca gcgagcagac gctgacggac aaccggatcg ttgcctgcga
      361 tccccttcca gtattcatgg atcgtggtgg cataatcggt cgtcagcgca tggagcaatg
      421 gctgtgcctg cgccggagag atctgtttgc cgtctccgat agggtcgacc agcaatagtc
      481 ccgccacccg ctccggatga gcgccggcgt acaccagcgc cactccacct cccaggctgt
      541 gcccgaccag cacgacgcga tcgaggttca gccgctcgac caccgccgcg atgtcgtttg
      601 ccattccctc gagcgtgtag tcgccatttt ttgccgggtc cgaccggcca tggccccgaa
      661 gctccagtgc cacggcacgc cgagtggatt gcaggtgggt gagctgagcc gaccattgga
      721 gggcattccc ggcaagggag tgcaccagga tgacgggcat ggcatcggac cgccctgcgg
      781 gtggtgcatc gtcgatgctc agcgttccag caggacccgg gatgagcgcg aaggtcaacc
      841 gtgctccctt gcaccagcag gggcaggtgg tgcgaccgag ctcgtagtca gccagggtgg
      901 tcgcagggtg agaatgcgct gataaaccgg acaactcgta gcatgagctc ccggcagata
      961 tccgatgctc atcagaaact cgcctacgat ttcaccgccg gtaaaccgaa acgttttacg
     1021 aaagagcttg acccactcct ccttcgattg cggatggtgg gctgccagcc agccatcgaa
     1081 agatcggtac gtggtccgca gctccaggat cttctgcgca ttggcaatgg cggcctcgac
     1141 cttcagccga ttgcggatga tgcccgcctc ggccagcaac cgccgtcggt ctcgggcgcc
     1201 atacgccgcg acgacctcgg ggtcgaaccc gccgtacgcg cgccggaatg cctcgcgctt
     1261 cttgaggatg gtgagccagg agaggcccgc ctgattgatt tccagcatga gccgctcgaa
     1321 cagggcggca tcctcctgga gcggaaagcc atactcccga tcgtgatacg gcccgtgcca
     1381 ttcatgtccc ggcgcaaagt cacagtatgt agtcgcgttc atggctgcta agctacaagg
     1441 atgcgcgcag tgattttcga aggagccggt ggtcccgagg ttatcaccat cggtgaagtg
     1501 ccgaagcccg aggtcaagcc ggagcacatc cgggtccggg tgcacgccgc cggcgtgaac
     1561 cgggccgacc tgattcagcg gcggggacac tatcccgctc ctccgggctg gccgtcgaac
     1621 atccccggac tggaatatgc cggcgaagtg gaagcggtcc gctccggggt aacccgctgg
     1681 cagatcggtg accgcgtcat gggactggtt ggcggtggcg cccaggcaga gatggtggtc
     1741 gttcaccagg acgaggtgct ggcgataccg gacgggttgt cctatcccga agcagcggcg
     1801 attccggaat cttttcttac cgcatacgat gccatcgtga cccgaggccg gctcgaggcg
     1861 ggagagcgca tcctgattca cgccgtgggt agtggtctcg ggactgcagc cgcccagatt
     1921 gccaagtatc tgggagccac cgtgctgggc acctctcgca gcggcgataa gttggcccgg
     1981 gcattgatct atggcctgga tgtgggaatc gataccagcc gaacggcgtt tcccgatgcg
     2041 gtgggagagc cggtgcatgt gatcctcgac gtccttggcg gaactgcgct ggccgataac
     2101 cttgccgtgc ttgcgccgcg aggccggctg gtcctgctgg ggtttctcgc cggcagccaa
     2161 gccgaggtgg atctggcgcc gattcttcgc aaacgattgg aactgatcgg aacggtgatg
     2221 cgaactcggg gccgggagga gcggattcca ctgatcgcgg agttcgctga acggatgctg
     2281 ccgctcttcg agagcca
//
LOCUS       DASRPQ010000064         1174 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_946607, whole genome shotgun sequence.
ACCESSION   DASRPQ010000064 DASRPQ010000000
VERSION     DASRPQ010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1174
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_946607"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1082)
                     /locus_tag="VFD73_00725"
     CDS             complement(<1..1082)
                     /locus_tag="VFD73_00725"
                     /inference="COORDINATES: protein motif:HMM:TIGR03437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72555.1"
                     /translation="MTIIGSGFGPDSTVYFDGLQAVTQSPFTGSDAQGSISVIPPQAG
                     SGQIATLTVFNSDGQNSMILQSQNAPTYAYPSIFPPQISNISVNALPANSSSMVEIST
                     SNTNFVEGQVTVGLGSDDITVRRVWVLSPTRLIANVAVAPGAALGFSEVSVISGMQVL
                     AQPAAFQTQPARAGLPALSLPVVNTDTSQQTIYPGSTASIFGSNLLAGTVQVTLNDVP
                     VQVQSATSTQVNFLVPPSFPTGPATLRFSNGTQAAFPVTVQIDAPPPAISALTSFSNF
                     SLAGLSSAAGDILNVQVTGLEPSITANSPRLRVTVSGIEMTVLQVTPLPNGAAQIQII
                     LKQSFGGSQVPLMVWVDGSSSAPVNI"
BASE COUNT          229 a          318 c          404 g          223 t
ORIGIN      
        1 ctgatgttta cgggggcgct gctggatccg tctacccaga ccatcagggg cacctggctg
       61 ccgccgaagg actgtttcag gatgatctgg atctgggcgg cgccgttcgg caggggcgtc
      121 acctgcagaa cggtcatctc gattccggac acagtgactc gcagccgcgg tgagtttgcc
      181 gtaatcgaag gctcgagtcc cgtcacctgg acgttgagaa tatcgccggc tgcggaggag
      241 agcccggcca gggagaagtt ggagaaactg gtgagcgcgc tgattgcggg cgggggagca
      301 tcgatctgta cggtcaccgg gaaggcagcc tgcgtaccgt tactgaaccg cagggtggcc
      361 ggcccggtcg ggaaactcgg gggtaccagg aaattaacct gggtggaagt ggcggactgc
      421 acctgtacgg gaacgtcgtt gagcgtcact tgcacggttc cggccagcag attggagccg
      481 aagatgctgg ccgtgctgcc tggataaatc gtctgttgcg aggtgtccgt attcactacc
      541 ggcagggaga gggcggggag tccggcacgg gcgggctgcg tctggaaagc agccggctgc
      601 gccaggacct gcatgcccga aatcacgctc acttccgaga atcccaacgc cgcgccgggc
      661 gctaccgcaa cattcgcaat gaggcgggtc gggctcagca cccagacgcg gcgaactgtg
      721 atgtcgtccg atcccagtcc gacagtgact tgtccctcga caaagttggt attggaggtg
      781 gaaatctcta ccattgacga ggaattcgcc ggcagggcat tgaccgagat attgctgatc
      841 tgcggcggga agatcgaagg ataggcgtac gtcggagcat tctgcgattg cagaatcatc
      901 gaattctgcc cgtcggagtt gaacaccgtg agggtggcga tctgtccgga accggcctgc
      961 ggcggaatta cgctgatgga cccctgggca tcgctaccgg tgaagggact ctgtgtcacg
     1021 gcctgcaggc cgtcgaagta gaccgtgctg tcggggccga atcccgatcc gatgatggtc
     1081 accgagccgt cctggttcag cgacgacgat ttgatgacgg ggggtccttt ttgaaccagg
     1141 ttgaccgcat ccgggagcac atagatatcg ttgc
//
LOCUS       DASRPQ010000065         1014 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1260812, whole genome shotgun sequence.
ACCESSION   DASRPQ010000065 DASRPQ010000000
VERSION     DASRPQ010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1260812"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..911)
                     /gene="ltrA"
                     /locus_tag="VFD73_00730"
     CDS             complement(<1..911)
                     /gene="ltrA"
                     /locus_tag="VFD73_00730"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: protein motif:HMM:TIGR04416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZI72556.1"
                     /translation="MGNRAAWPGRRHVSRSGTQEKPFRISKQLVWEAWKRVRANKGAP
                     GADMQSLAEFESGLRDNLYKIWNRMSSGTYFPPPVRAVEIPKPHGGGVRILGVPTVAD
                     RVAQTVAAMALEARTESIFHDDSFGYRPRRSALDALAKCRLRCQKKNWVLDLDIQKFF
                     DSVDHQLMVKAVEANTTHDQRWVVLYVKRWLKAPLQLPDGTIQARDRGTPQGSAVSPV
                     LANLFMHYAFDTWLEKEFPAVEFERYADDAVVHCVTERQALQVRDALAERMGQVGLRL
                     HPDKTKIVYCRDDNRPGSHEHVSFTFLG"
BASE COUNT          170 a          353 c          287 g          204 t
ORIGIN      
        1 cccaggaacg tgaacgacac gtgctcatgc gagccgggcc ggttatcgtc cctgcagtac
       61 acgatcttgg tcttgtccgg gtggagccgg aggccgacct gtcccatccg ctccgcgagc
      121 gcgtcccgca cctggagggc ctgccgctcg gtcacgcagt gcaccacggc gtcgtccgca
      181 tagcgctcga attccactgc cgggaattcc ttttccagcc aggtatcgaa cgcgtaatgc
      241 atgaacaggt tcgccagcac gggcgatacc gccgaccctt gcggggttcc gcggtcccgt
      301 gcctgaatgg tgccgtcggg cagctgaagc ggggctttca gccaccgctt cacatatagc
      361 actacccacc gctggtcgtg cgtggtgttg gcctcgaccg ccttgaccat cagctgatgg
      421 tccacggaat cgaagaattt ctggatgtca agatctagca cccagttctt cttctggcac
      481 cgcagacggc atttcgctag cgcgtccagc gcactgcgcc ggggccggta cccgaaggaa
      541 tcatcgtgga agattgactc cgtgcgggcc tccagcgcca ttgccgcgac tgtttgcgcg
      601 acacggtctg ccacagttgg caccccgagg attctcaccc cgccgccgtg cggcttgggg
      661 atttccaccg ctcgcaccgg gggcgggaag taagtcccgg acgacatccg gttccagatc
      721 ttgtagaggt tgtccctcag accggactca aattccgcca gcgactgcat atccgctccc
      781 ggcgctccct tgttagccct gacccttttc cacgcctccc atacgagctg cttggatatc
      841 cgaaacggct tttcctgtgt ccctgacctg ctcacgtgtc tcctcccagg ccatgcggcc
      901 cggttgccca tgcgaacaaa tccagatgag ccggcccctt cgctccactc ccattacagg
      961 agcctcgcca ctactacggg ccggtccgcc ggcagatgcc gtgacggtac tcag
//
LOCUS       DASRPQ010000066         4913 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3772325, whole genome shotgun sequence.
ACCESSION   DASRPQ010000066 DASRPQ010000000
VERSION     DASRPQ010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4913
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3772325"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..995)
                     /gene="obgE"
                     /locus_tag="VFD73_00735"
     CDS             complement(<1..995)
                     /gene="obgE"
                     /locus_tag="VFD73_00735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HZI72557.1"
                     /translation="MLIDRAVIRVVAGAGGSGASSFARFKYKPKGGPDGGDGGHGGSV
                     YVKADPNLATLLDYRYRNLWQAERGEHGKGKTQTGASASDVHLPVPPGTVVRDAITGE
                     LIGEVLQPEDTLRVARGGRGGRGNARFATATHQAPREWEPGEPGEDRQIELVLKLIAD
                     VGLVGEPNAGKSTLLSVISAARPKIADYPFTTLEPNLGVVALSNHRTFVVADIPGIIE
                     GAHHGKGLGFRFLQHVERTRVLAFLIPLDQEDPQAAYDRLREEVRQYSEELVHKTHLV
                     VLTKLDLWKPGESVPEPTTEGAVGVVAISSATGQGVENLKNYLWQLVQQAKTSESP"
     gene            complement(995..1642)
                     /locus_tag="VFD73_00740"
     CDS             complement(995..1642)
                     /locus_tag="VFD73_00740"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HZI72558.1"
                     /translation="MMMSKQDSLDPLTRDLVRFAAAIAQGYEPELRESADLLRSSQVP
                     AGWVDELLLQSILMVGYPRALIAFGVWRKVSGLPPAESDPDQDYGRAGEWTKRGEEIC
                     AVVYGENYGKLRESVRALHPAVDSWMITEGYGRTLARPALDLRRRELCTVAQTAVLEA
                     PRQLHSHLRGALNAGASFGQIEGTLSIVNPLLSFDQWKKIKQLWRTVRDGWVPAH"
     gene            1777..3291
                     /locus_tag="VFD73_00745"
     CDS             1777..3291
                     /locus_tag="VFD73_00745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72559.1"
                     /translation="MPAPIRAVLLATALAGWFLPVPCVGQAASPYITLDDPRLPLLEH
                     LIARGDVEDPSPMVRPFRRADAVRVLAAADTGDSGSTAPLIRQLRNEFEDPSGNVWIL
                     SGRLGGQAYTHARRELLHPAGPDGVRPYVEAAASAVFGNLVLVTRPTIEPRLVNDPDW
                     LGRRELKLAGRVADAYISAQFKYAKLFYGQTDRNWGPVGLPGIPLSNYGYERQGLAIE
                     VGGGPLRLAALATDLQDQPDSIGQTLHRYYFVHRLQIRASRRLFLGPWEGIIVAGPNR
                     NFETRFRNPLSLGYLANTIGFGDRSNVMLGLDVLWRAWRKTSLQAQLALDDFWYDDRQ
                     RNRDRWALTIGAEGALGPTAGWQALYTQVSSLALRAFNPAENFTDGGVGIGRNFSDQD
                     QLTVRATLPLRNRWLLAPELTVLRQGEGQINDPYPVPDANGVLSTPALFIGVVEKTYR
                     AAIAFSGRSGPFDLSVNAGFHHVVNSGHVPGNSVDRFEGRLQATVGLWRKGVFQ"
     gene            3288..4322
                     /locus_tag="VFD73_00750"
     CDS             3288..4322
                     /locus_tag="VFD73_00750"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HZI72560.1"
                     /translation="MKQAPAPLSRDRVLHLIQRMQSSRVAVLGDIMLDRYLIGDTERL
                     SPEAPVPVVTVAERHAALGGAANVAANVVALGAHCLLVGVVGDDVDGAAIRQELAVAR
                     LEDRFVQTVAGRPTTSKTRIIARGQQIVRIDDEVDTLLEGQDLSRLVAGAREALADAD
                     ALLLEDYNKGTLSPGVIASVMEVAKRRGIPIVVDPKYRQFFEYAGATVFKPNRRELES
                     ALGAAVDLQNGNALPGVLSRLKVDNLLVTLGSEGMVLVTKDGALTQIPSIARQIYDVS
                     GAGDTVTAWLGTALAAGASIREAAQLANYAAGVEVGKPGVATVSPDEVLAAHEERFDQ
                     IGKLRRGGLI"
     gene            complement(4319..>4913)
                     /locus_tag="VFD73_00755"
     CDS             complement(4319..>4913)
                     /locus_tag="VFD73_00755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72561.1"
                     /translation="ACWTPLGPDALRSPIPPHDTSFQSMLGALGKLSLVTRAHAVDAL
                     RHLAADPHTPRSLASLCRYETKRSGLDIADSSRMVLDSGLVVPARDVGGWLKAWTRRQ
                     LLSFLNSLGVRAPKSWSKERLTEVALTDCEAEVRSRMDEYGAVELAPVYAEAAARLGS
                     YLEDVKETWRVWLGFGTGVRRSLRRLEQEDTAETPTP"
BASE COUNT          887 a         1541 c         1541 g          944 t
ORIGIN      
        1 ggcgattcgg aagtcttggc ctgctgcacc agctgccaca aatagttctt cagattctct
       61 actccttgtc cagtcgcgct ggaaatagcg accacgccga cagcgccctc ggtggttggc
      121 tcgggcactg actcgccggg cttccataga tcgagcttgg tcaggacgac gaggtgggtc
      181 ttgtgcacca gctcttcact gtactgccgc acttcctctc tcagacgatc gtaggcggcc
      241 tggggatcct cttggtcgag cggaatgaga aaggctagaa cccgggttcg ctcgacatgc
      301 tgcaagaacc ggaaccccag gcctttgccg tggtgagcgc cttcaatgat gccaggaatg
      361 tcggccacca cgaacgtgcg atggttcgag agcgctacca ctccgaggtt gggctccagt
      421 gtggtaaacg ggtagtctgc gatcttggga cgcgcggccg aaatgactga gagaagagtg
      481 ctcttgcccg cgttgggctc acccaccaga ccgacatcgg caattaactt gagaaccagc
      541 tcgatctggc ggtcttctcc cggctcaccg ggctcccatt cgcgtggtgc ctggtgggtt
      601 gcggtggcaa accgcgcgtt ccccctccct ccgcgccctc cgcgggcaac tctcagggtg
      661 tcctcgggct gaaggacctc cccgatcagc tcgccggtga tggcgtctcg caccacggtt
      721 ccggggggaa cagggagatg aacgtcgctt gcggacgccc cggtttgggt cttgcccttc
      781 ccgtgctcac cccgctccgc ttgccacagg ttgcgatatc tgtagtcgag tagtgtagcc
      841 agattcggat ccgccttgac atagacgctc ccgccgtggc cgccatcgcc gccgtcggga
      901 cctcccttgg gcttgtactt gaatcgggca aaggagctgg ccccggagcc accggcacct
      961 gccacgaccc gaatgacggc gcggtcgatc agcatcagtg tgccggcacc cacccatctc
     1021 ggactgtgcg ccacaactgc ttgatttttt tccactgatc gaacgagagc agcggattga
     1081 cgatcgagag agtgccctcg atttggccga agctggctcc tgcattgagc gcgccccgga
     1141 gatgggagtg cagttggcga ggagcctcga gtaccgccgt ttgcgcgacg gtgcagagct
     1201 ctcttcttct caagtcgagt gccggccgag ccagggtccg gccgtaccct tccgtgatca
     1261 tccagctatc cacggctgga tgcagggcgc ggacactctc gcggagcttg ccataatttt
     1321 cgccatatac caccgcacag atttcttctc cccgtttggt ccactcacca gcgcgcccgt
     1381 aatcctgatc gggatcggac tcagcgggcg ggagcccgct gactttgcgc cagacgccga
     1441 aggcgatcag ggcgcgtgga taccccacca tgaggatgct ttgcaacagc agttcatcga
     1501 cccagccggc cggcacctgg ctcgagcgca gcaagtcggc gctttcgcga agttcaggct
     1561 cgtagccctg cgcgatggca gcagcgaacc ggaccagatc ccgagtgaga ggatcgaggc
     1621 tgtcctgctt cgacatcatc atagtcccga atgcgaagga tggcggatcg attccctgcc
     1681 agcaccatca gattctgtcg ccgacggctt ggacgggaga tgaagatagc atcctgccac
     1741 tgcaatattc ctttcgggcc cttaggtttc gccgccatgc cggctccaat tcgcgctgtt
     1801 ctcctcgcga ccgctttggc cggctggttc ctccccgtgc cctgtgtcgg ccaggcagcc
     1861 tcaccctaca taacgctgga tgaccctcga ctcccgctgc tggagcacct gattgcacgg
     1921 ggtgatgtcg aggacccctc gcccatggta cggccattcc gccgcgccga tgccgtacga
     1981 gtcttggcgg cggcggatac gggagatagc ggctcgaccg cccctctcat tcgacagctc
     2041 aggaacgagt tcgaggatcc ctcaggcaac gtatggattt tgtcgggtcg tttggggggc
     2101 caggcataca cccacgcccg acgagagctc cttcaccccg ccggccccga tggagtccgc
     2161 ccctatgtag aggcagcagc ctcggcggtg tttgggaatc tggtactcgt aaccagaccc
     2221 accatcgaac cccgtttggt gaacgatcct gactggctcg ggcgcaggga gttgaagctg
     2281 gcaggcagag tcgccgacgc ttatatcagc gctcagttca agtacgccaa actgttctat
     2341 ggccagaccg acagaaactg gggaccggtc gggctgcccg gcattccgct cagcaactac
     2401 ggctatgaga gacaaggtct cgccatagag gttggaggcg gcccactccg gctcgcggcg
     2461 ctcgcgactg acctgcaaga ccagcccgac agcatcggtc agacgttgca ccgctactac
     2521 ttcgtgcatc ggctgcagat tcgagcctct cgccgactct ttttgggccc atgggaggga
     2581 atcatcgttg ccggccccaa ccggaacttc gagacccgtt tccgaaatcc tttgtcgctc
     2641 ggttatttgg ctaacacgat aggctttggc gaccgaagca acgtgatgct cgggctggac
     2701 gtcctgtggc gcgcctggag gaaaacctct ctacaagcac agctggcgct cgacgacttc
     2761 tggtacgatg accggcagcg gaaccgcgac cgttgggcac tcaccattgg tgccgagggg
     2821 gcgctgggtc caactgctgg gtggcaggct ctctataccc aggtctccag tctcgccctt
     2881 cgcgccttta atcccgccga aaacttcacc gacggagggg ttgggatagg tcggaacttc
     2941 agtgatcagg accagctcac ggttcgcgcc accctgcctc tgcggaaccg atggttgctg
     3001 gcccctgagt tgacagtact ccggcaggga gagggccaga tcaacgaccc gtaccccgtt
     3061 cccgatgcga atggcgtgct ctccactcca gcccttttca tcggggtcgt cgagaaaacc
     3121 tatcgagcgg ctatcgcctt cagcggccgc agtggaccct tcgacctgtc ggttaacgcc
     3181 ggctttcatc atgtagtcaa cagcgggcat gtcccgggaa acagcgtcga tcgtttcgag
     3241 ggtaggctcc aggcgaccgt gggcctgtgg cgaaaggggg tgttccaatg aaacaggcgc
     3301 ccgcgcccct cagccgtgac cgtgtgttac acctgatcca gcggatgcag agcagtcggg
     3361 tggctgtgct tggtgatatc atgctggacc ggtacctgat cggtgacacc gagcggcttt
     3421 ccccggaagc ccccgtcccc gtcgtgaccg tggccgagcg ccacgctgcg ttgggtgggg
     3481 cggcgaacgt tgccgcaaac gtcgtcgccc tgggtgccca ttgtttgctc gtgggagtcg
     3541 taggggacga cgtcgatggt gcggccatcc ggcaagaact ggcggtagca cggctggagg
     3601 atcgcttcgt acagacggta gccggcaggc caaccacctc gaagacgcgg atcatcgctc
     3661 gaggccagca gattgtccgc atcgatgatg aggtggacac cctgctcgag gggcaggatc
     3721 tgagccgact ggtggctggc gcccgagagg cactggccga cgccgatgcg ctgctgttgg
     3781 aggactacaa caagggaacg ctttcgcccg gggtgatcgc ttccgtcatg gaggtcgcga
     3841 agcggcgggg cattcctatc gtcgttgatc ccaagtaccg ccagttcttc gagtatgcag
     3901 gggcaacggt atttaagccc aaccggcggg agctggaatc ggctctggga gcggcagtgg
     3961 acctgcagaa cggcaatgcc ttgcccggtg tcctgtcacg cctcaaagta gacaatctgt
     4021 tggtgacgct cggatccgaa ggcatggttc tggtgacaaa ggatggagcg ctcacccaaa
     4081 tccccagcat tgctcggcag atttacgacg tatcgggggc gggtgatacg gtgacggcct
     4141 ggctgggtac cgcactggcg gcaggggcct ccattcgaga agccgcccag ctggcgaact
     4201 atgccgcggg agttgaggta gggaaaccgg gagtggcgac ggtctcgccg gacgaggttc
     4261 tggccgcgca cgaagagcgc ttcgaccaga ttggcaagct gagacgggga ggtcttatct
     4321 agggtgtcgg ggtttcagcc gtgtcctcct gttccaatcg acggagcgag cggcgcacgc
     4381 cggtaccaaa tccgagccag acccgccaag tctccttcac gtcttcgagg tagctgccca
     4441 gccgtgcagc cgcctcagcg tacacgggtg caagctcaac cgcaccgtat tcgtccattc
     4501 gcgaccgaac ctctgcctcg cagtcggtca aggcaacctc ggtgaggcgc tccttgctcc
     4561 aggacttggg cgcccgaacc cctaggctgt tgaggaagct gagcaactga cggcgggtcc
     4621 acgccttgag ccagcccccc acatctcgcg ccggcaccac cagaccgctg tccagtacca
     4681 tccgtgagga gtcggcgatg tcgagccctg accgcttggt ttcgtaccga cacaggctgg
     4741 cgagcgacct cggagtatgg ggatccgccg ccaggtgacg aagcgcatcg accgcatgag
     4801 cgcgggtaac cagagagagt tttcccaggg cgccaagcat actctggaag ctcgtgtcgt
     4861 gcggagggat cggtgaccgg agtgcgtcgg gtcccagggg cgtccagcag gcc
//
LOCUS       DASRPQ010000067         1158 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2201003, whole genome shotgun sequence.
ACCESSION   DASRPQ010000067 DASRPQ010000000
VERSION     DASRPQ010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2201003"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..322
                     /locus_tag="VFD73_00760"
     CDS             <1..322
                     /locus_tag="VFD73_00760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72562.1"
                     /translation="AAAGAGAGIYLTSRGAESLVASQIDQVARNAQSVMSDEGIVPDA
                     SSTENSGDKRELKGKKGDLDVTISMERKDPSTTQVEVTARKNVAEWDKDYAQQLLSKI
                     VKKS"
     gene            complement(398..>1158)
                     /locus_tag="VFD73_00765"
     CDS             complement(398..>1158)
                     /locus_tag="VFD73_00765"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HZI72563.1"
                     /translation="PLGQLKAADADRPVYAPSRSLDYEAEMGCFVGPGTRLGERVSME
                     ASEQHLFGMVLVNDWSARDIQSWEYQPLGPFLAKSFATTISPWVITMEALEPYRVPAV
                     ERSAGDPQPLDHLDSPSNRSHGAIDAIVEVYLSSNAMRHAGTAPVRVSRARLADLYWT
                     PAQMLAHQTSNGCNLHPGDLFATGTISGPTPESRGCLLERTWRGAEPLTLPSGERRSF
                     LEDGDEVIMRAFCERPGAARIGFGECRGTIVAAG"
BASE COUNT          237 a          370 c          356 g          195 t
ORIGIN      
        1 tgccgccgct ggtgccggcg cgggcattta tctcaccagt cgcggagccg aatcactcgt
       61 ggcatcgcaa atcgatcagg ttgcgagaaa tgctcagtcg gtgatgagtg acgaaggaat
      121 cgtacccgac gcttccagca ccgaaaacag cggagataag cgggagctca agggcaagaa
      181 gggtgacctt gacgtcacca tttcgatgga acggaaagac cccagcacca cccaggtcga
      241 agtcaccgcc cggaagaacg tggccgagtg ggacaaggac tacgcccaac agctgctctc
      301 gaagatcgtg aagaagagct gagccgagaa aagaccggct agccaaacga aatgctcggg
      361 agcacgcgcg ctcgagcatt ttccttttca cactctttca gcctgctgca acgatcgtcc
      421 cccggcactc cccaaaccca attcgcgcgg cccccggtcg ctcgcagaac gcccgcatga
      481 tcacttcgtc tccgtcctcc aggaacgatc gccgttcgcc cgatggcagg gtgaggggct
      541 cagccccgcg ccaggtccgc tcgagcaggc atccgcggct ctccggcgtc ggccccgaga
      601 tcgtgccggt agcgaatagg tcgccggggt gcaggttgca tccattgctg gtctgatggg
      661 caagcatttg cgccggggtc caatacaagt cggccaggcg ggcccgactg actctgaccg
      721 gtgccgtccc ggcgtgacgc atggcattgg atgagagata gacttccact atggcatcga
      781 tggctccgtg tgagcggttg gacggagagt cgaggtgatc caacggctga ggatcgccgg
      841 cggaccgctc gaccgccggg acacggtatg gctccagcgc ctccatcgtg attacccagg
      901 gagagatagt ggtcgcgaag cttttcgcca ggaacggacc cagcggctga tattcccagc
      961 tctggatgtc ccgggccgac cagtcgttga ccagcaccat gccgaacaga tgctgctcgc
     1021 tcgcctccat cgatacccgc tcacccaggc gagtacccgg tcccacgaag caccccattt
     1081 ccgcctcgta gtcgagcgaa cggctcggtg catagaccgg acgatccgcg tcggctgctt
     1141 tgagctggcc caaggggc
//
LOCUS       DASRPQ010000068         2065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3145308, whole genome shotgun sequence.
ACCESSION   DASRPQ010000068 DASRPQ010000000
VERSION     DASRPQ010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3145308"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1014)
                     /gene="coaBC"
                     /locus_tag="VFD73_00770"
     CDS             complement(<1..1014)
                     /gene="coaBC"
                     /locus_tag="VFD73_00770"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HZI72564.1"
                     /translation="MTVWTDRHVVLGVSGGIASYKSCILARRLTEAGASVDVVLTRGA
                     AEFVGPLTFEGLTGRPVLGSLWEPGRALAHVRLGQDAAIIIVAPATAHLIARVAQGLA
                     DDVLTALLLARTAPLVMAPAMNDEMYARPETQANLERLRVRGVVLVGPEIGALAEGPS
                     ERPGRMSEPETIMAYAARVLRAGRLQGAKVVVTAGPTRESIDPVRVVTNRSSGKMGYR
                     VAEAAWERGAEVVLITGPVTLPDPIGVTVRRVESTQQLEEAVRAELPAADVLVMAAAP
                     ADFRPSSPSEGKRSRIDGALAVPMEPTSDVLDATRELRKPGSMMVGFALETGDALAKG
                     LAKL"
     gene            complement(1011..1223)
                     /locus_tag="VFD73_00775"
     CDS             complement(1011..1223)
                     /locus_tag="VFD73_00775"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:NF013365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HZI72565.1"
                     /translation="MRIITPSEVAKQAGNKYLGVLVAAKFARYLNEFPKDHLARPSEK
                     LTTKALQELVEGELNYKLLRRRRSEA"
     gene            complement(1282..>2065)
                     /gene="gmk"
                     /locus_tag="VFD73_00780"
     CDS             complement(1282..>2065)
                     /gene="gmk"
                     /locus_tag="VFD73_00780"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: protein motif:HMM:NF012832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HZI72566.1"
                     /translation="NRPAGGRYEGRAGEVPGTAREPRVKPFLLVLSAPSGGGKTTIAK
                     MLLQGRDDLGYSVSATTRPRRPGERNGVDYHFLSRDEFISRQESGEFLEWATYGGELY
                     GTLKSEIDRIFSEGRHAVLDVEIEGARQIRANFPNALLLFVLPPSASALVERLVGRKT
                     EDPQLVRERIVRAADELAAVAEYDYAILNEDLVVAVSQVAAILEAESWRVSRQDTLPE
                     FIEQLRRDVVKAAERIGSKSSVISRRSSDRSKESRSSEFTDD"
BASE COUNT          368 a          706 c          609 g          382 t
ORIGIN      
        1 cagcttggca agtccttttg ccagggcgtc tcccgtctcc agggcaaaac ccaccatcat
       61 gctgccgggc tttcgcagtt cccgcgtagc atccaggacg tcactggtgg gctccatcgg
      121 aactgccagc gcgccatcga ttcgggaccg cttgccctcg ctcggactgc tgggtcgaaa
      181 atcggctggt gccgctgcca tcacgaggac atcggccgcc ggcagttcgg cgcgcaccgc
      241 ttcctccagt tgctgggttg actcgactcg gcggaccgtc accccaatcg gatcgggcag
      301 cgtcaccggt ccggtaatga gcaccacttc agctccgcgt tcccacgccg cctccgcgac
      361 ccgatatccc atcttcccac tcgatcgatt ggtgaccact cggaccggat cgatggattc
      421 gcgggtggga cccgcagtga cgacgacctt ggcaccctgg agccggccgg cacggagaac
      481 ccgcgccgcg taggccatga tcgtctcggg ttcgctcatc cgtcccggcc gctccgatgg
      541 tccttcggcc agcgcgccga tctcgggtcc caccaggaca acaccacgga cccggagccg
      601 ctccaggttg gcctgggtct cgggacgggc gtacatctca tcgttcattg cgggagccat
      661 tacgagcggc gcggtgcggg cgaggagcag tgccgtgagc acatcgtcgg cgaggccttg
      721 agccacccgg gcgatgagat gtgccgtggc cggagcgaca atgatgatgg cagcgtcctg
      781 acccaaccgc acatgagcga gcgcccgtcc tggttcccac aaggaaccca gaaccgggcg
      841 cccagtcagt ccctcgaagg tcaacgggcc cacgaattca gcagccccgc gggtgagaac
      901 gacgtccacg gacgcgccgg cctcggtgag ccggcgtgcc aggatacagc tcttataact
      961 ggcgataccg ccagacacgc cgagaacgac gtgccggtcg gtccacacgg tcacgcctcg
     1021 gagcggcgac ggcggagaag cttgtagttc agctcgcctt cgacgagctc ctgcagggcc
     1081 ttggtcgtga gcttctcgct cggccgggcc agatgatcct tggggaactc gttcaggtag
     1141 cgggcaaact tcgccgccac aagaacgccc agatacttgt tgcctgcctg cttggcgact
     1201 tcacttggcg taatgatccg catccttcac ctcctctaag tagtcgtcag tcgtcagtcg
     1261 tcagtgatca gtcgtcagtg atcagtcgtc agtaaactca gaggatcgag attccttcga
     1321 cctatctgac gaccgacgac tgatgactga ggacttgctt ccgattctct ccgccgcttt
     1381 taccacgtct cgccgcagct gctcgataaa ctccggcaag gtgtcctgcc gggagactcg
     1441 ccatgactcc gcttccagga ttgccgcgac ctgggagact gccaccacca ggtcctcgtt
     1501 gaggatggcg tagtcgtact cggccacggc ggccagctcg tcggcggcgc ggacgatccg
     1561 ctcccgcacc aactggggat cctcggtttt tcttcctacc agccgctcga ccagtgcact
     1621 ggccgatggc ggcagcacaa acagcagcag ggcattcgga aaattagccc gaatctggcg
     1681 agcaccctcg atctcgacgt cgagcacggc gtgccggccc tcggaaaaga tccgatcgat
     1741 ctcgctcttc agtgtgccgt acagctcgcc gccgtaggtg gcccactcaa ggaactcccc
     1801 actctcctgc cggctgatga actcgtcgcg actcagaaag tgatagtcca ccccattccg
     1861 ctcgccggga cgcctgggac gagtggtggc cgagaccgag tagcccagat cgtccctacc
     1921 ctgcaacagc atcttcgcga tcgtcgtctt cccgccgccg gatggcgccg agagcacgag
     1981 gagaaatggc ttcactcgag gttctcgagc tgttcccgga acttctccag ctctcccttc
     2041 atagcgacca ccagctgggc gattt
//
LOCUS       DASRPQ010000069         3482 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3454977, whole genome shotgun sequence.
ACCESSION   DASRPQ010000069 DASRPQ010000000
VERSION     DASRPQ010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3482
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3454977"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..196)
                     /locus_tag="VFD73_00785"
     CDS             complement(<1..196)
                     /locus_tag="VFD73_00785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HZI72567.1"
                     /translation="MNISRRHFLAGLGAAGAAVGADAFGLEATRVELTRHDVQVRNLP
                     PALDGIRLAQISDVHFPGNTL"
     gene            complement(254..1783)
                     /locus_tag="VFD73_00790"
     CDS             complement(254..1783)
                     /locus_tag="VFD73_00790"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZI72568.1"
                     /translation="MAGEQSAPSGPDLGAGIAVASVPDGKLIGGHVGKEAVLLSRHGG
                     EWFAVGAVCSHYSGPLPEGLMVGDTVRCPWHHACFSLRTGEALRPPALNDITCWVVEQ
                     DGEMVYVRHPAPKAATSKRSRKADGPDSVLIIGAGAAGECAVETLRREGYEGTVTMFD
                     PDPDAPYDRPNLSKDYLAGSASEDWIPLHPDEFYAEKNIDIVRNRRVVGLEPRNRRIR
                     LDDGSTRQYGALLLATGATPIRLAPEVDRGAGAHYLRSLADSKAIIAAAASARRAVIL
                     GASFIGLEVAASLRARHLDVHVVAPQARPLERVMGPELGDFIRKLHEEHGVVFHLPHT
                     AKEITRGTVVLDNDERLPADLVVAGIGVRPNLELAQQAGLEIDRGIVVDELLQTSAPG
                     IFAAGDIARWPDPHSGERIRVEHWVVAQRQGQAAARNILGRREVFDAVPFFWSQHYDV
                     PINYVGHAEQWDRLAVDGNIDQRDCAVRFFRGDRALAVATIYRDVESLEAEVAMEQVA
                     V"
     gene            complement(1789..2241)
                     /gene="mscL"
                     /locus_tag="VFD73_00795"
     CDS             complement(1789..2241)
                     /gene="mscL"
                     /locus_tag="VFD73_00795"
                     /inference="COORDINATES: protein motif:HMM:TIGR00220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HZI72569.1"
                     /translation="MFKEFKAFALRGNVLDLAVGIIIGGAFGTIVKSLVDDIIMPPVG
                     LLLGNVDFSDLFVLLKTGPKAAPPYASLADARAAGAVTWNYGQFINNVVTFLIIAFAV
                     FLVVRMANRLSPKDATAAPATKDCPYCRMAIPVGASRCPHCTTELQAA"
     gene            complement(2282..>3482)
                     /locus_tag="VFD73_00800"
     CDS             complement(2282..>3482)
                     /locus_tag="VFD73_00800"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HZI72570.1"
                     /translation="GARLYLSGMGGADWQYDFASEANTSLLEDGSRFSVGRVVLDVLH
                     VPGHTPEHLSFLVTDCASAGEPMGALTGDFIFVGDVGRPDLLERAVKVRGSMEDSARQ
                     LYRSLQRFRALPDYLQIWPGHGAGSACGKALGAVPQSTLGYEKRYNWAFSVADESAFV
                     SAVLAGQPDPPRYFAEMKRINRSGPRILGQHARPAKLAVDSVAAVLADGSPVVDTRAA
                     AAFRRGFLTGTINIPANRSFTTWSGSLLPYDRKLYLIAEDQRIDELVEDLAGVGLDQI
                     EGYWSPDLLEHPGVKDSLQQLPTIAVADLADGKNDHVVVDVRAEAEWNAGHIPGSVNI
                     PLGELEQRLRELPRDELVVHCQSGGRAAIAASLLRARGFTGVQLFSGGFAEWCRAGQP
                     SSRLRTA"
BASE COUNT          666 a         1125 c         1077 g          614 t
ORIGIN      
        1 cgagagtgtt gccgggaaaa tgcacatcgc tgatctgcgc caggcgtatg ccgtccagcg
       61 caggagggag attccggacc tgcacgtcgt gtctggtaag ctctacccgg gtggcctcca
      121 ggccgaaggc gtcggcgccc acggccgcgc cggccgcgcc caaaccggcc agaaaatgcc
      181 ggcggctgat gttcatgcct gaaggtagtt cagcggagcg ggagcgagac gaggagcgtt
      241 cggaagggcc agctcagaca gccacctgct ccatcgccac ctctgcttcc aggctctcga
      301 catcgcgata gatggtggca accgctaacg ctcgatcgcc gcggaagaac cgcacggcgc
      361 agtcccgctg gtcgatattc ccgtctaccg cgagacggtc ccactgttca gcatgcccga
      421 cgtagttgat cgggacatcg tagtgctggc tccagaagaa cggtacggcg tcgaacacct
      481 ctcgccggcc caggatattc cgggccgcag cctgcccctg gcgctgcgcc actacccagt
      541 gctcgacccg gatgcgctca ccactgtgag gatccggcca gcgggcgata tcacccgcgg
      601 caaagattcc cggtgcgctg gtctggagca gctcatccac cacaattccc cggtcgatct
      661 cgagtccagc ttgctgtgcc agctcgaggt tgggccgaac accgatgccc gcgacgacca
      721 gatccgccgg cagtcgctca tcgttgtcga gtacgacggt tcctcgcgtg atctctttgg
      781 cggtgtgcgg cagatggaag acgaccccgt gttcctcatg cagcttgcgg atgaaatcac
      841 ccagctcagg gcccatgact cgctcgagcg gacgcgcctg aggcgccacg acatgcacat
      901 cgaggtgtcg tgctcggagc gatgccgcca cttccagccc aatgaagctg gccccaagga
      961 ttaccgcgcg gcgggcgctc gccgcagcgg cgatgatggc tttgctgtct gccaggcttc
     1021 tgaggtagtg ggccccggcc ccgcgatcaa cttctggtgc cagacggatc ggagtggcgc
     1081 cggtcgcaag caaaagagct ccgtattgcc gggtgctccc atcatccaga cgaatccggc
     1141 gattgcgagg ctccagcccc acgaccctcc gattccgaac gatgtcgatg ttcttttcgg
     1201 cgtagaactc gtcggggtgg agagggatcc aatcttccga ggcggagcct gccaaatagt
     1261 ccttggacag attgggccgg tcgtagggag cgtcgggatc agggtcgaac atggtgacgg
     1321 tcccttcgta gccctcgcgc cgcaacgtct ctacggcaca ctcccccgct gcgccggcgc
     1381 cgatgatcaa cactgagtca ggaccgtcgg ctttccggct tctcttgctt gtcgcggctt
     1441 tgggagcggg gtgacgaacg tacaccatct ccccgtcctg ttcgaccacc cagcaggtga
     1501 tatcgttgag cgccggcgga cggagagcct cgcccgtccg caggctgaag cacgcgtggt
     1561 gccaggggca gcgaacggta tcgcccacca tgagaccttc cggcagcgga ccactgtagt
     1621 ggctgcaaac ggcacccaca gcaaaccatt cacctccatg gcggctgagg agtacagcct
     1681 ccttaccgac atgtccgccg atcagctttc cgtccgggac agatgcaacg gcaattcctg
     1741 ctccgagatc ggggccgctg ggggcgctct gttctccagc catgagtgct acgccgcctg
     1801 cagctcggtg gtgcagtggg ggcaccgact ggcaccgacc ggaatagcca tgcggcagta
     1861 gggacagtcc ttcgtggcgg gtgcagccgt agcgtctttc gggctcaagc ggttggccat
     1921 tcgaaccacc aggaacacgg caaaggcaat gatcaggaag gtgaccacgt tgttgatgaa
     1981 ctggccatag ttccaggtga cagcgccggc cgccctggca tcggccaacg acgcataggg
     2041 aggggccgcc ttagggccag tcttcagaag aacgaacaaa tccgagaaat ccacattgcc
     2101 cagtagcagg ccgacaggcg gcatgatgat gtcatcgacg agcgatttca cgatggtgcc
     2161 gaatgctcca ccgatgatga tgccgactgc cagatccaga acgttgccgc gcaaggcgaa
     2221 ggccttgaac tctttgaaca tggatgttct ccgaagagag gttcctggat ataccggccg
     2281 ctcaggcggt gcgcaaccgt gacgatggtt ggcctgcccg gcaccattcg gcgaacccgc
     2341 ccgaaaacag ctgcaccccg gtaaacccac gggcgcgaag caggctcgcg gcaatcgccg
     2401 ctcgacctcc gctctggcag tgcaccacca actcgtctct gggaagctct ctcagtcgct
     2461 gctcgagttc tcccaacgga atgttcaccg acccgggaat gtggccggcg ttccattccg
     2521 cttcggcccg gacgtccaca acgacgtgat cgttcttgcc atcggccagg tcggccacgg
     2581 ctatggtcgg gagctgctgc agcgaatcct tcaccccggg atgctccagc agatcagggg
     2641 accagtagcc ctcgatctga tcaaggccga ccccggccaa atcttcgacc agctcatcga
     2701 ttcgttgatc ttcggcaatg agatacagct tgcgatcgta aggcaggaga gaccccgacc
     2761 aggtggtaaa actgcggttt gccggaatgt tgatggttcc cgtaagaaag ccgcgtcgga
     2821 aagctgcggc agccctggta tcgaccaccg ggctcccatc agcgaggacc gctgccacgc
     2881 tgtcgaccgc cagtttcgcc ggccgggcgt gctggccgag aatgcgggga cccgagcggt
     2941 tgatccgctt catctcggcg aaatatcgag gtggatccgg ctgacccgcc agtacagcag
     3001 agacgaatgc cgattcgtcg gcgacgctga aggcccagtt gtaccgtttc tcgtagccca
     3061 gggtggattg gggaacggct cccaatgcct tcccgcaggc cgacccggcg ccatgaccgg
     3121 gccagatctg caggtagtcg ggcagagcac ggaatcgctg taacgagcgg tagagctggc
     3181 gggcgctgtc ctccatcgat ccccggacct tgacggcgcg ttccagaaga tcgggtcggc
     3241 ccacatctcc aacaaagatg aagtcgccgg tcagcgcacc catcggctcg cctgcgctcg
     3301 cgcagtcggt taccagaaag ctcaggtgtt ccggggtgtg ccccggcaca tgcaggacgt
     3361 ccagcaccac tcgtccgact gagaaccggg agccgtcctc cagcaagctc gtattggctt
     3421 cgctggcaaa atcgtattgc cagtcagctc cgcccatccc ggacagatag agcctggctc
     3481 cg
//
LOCUS       DASRPQ010000070         1534 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3145664, whole genome shotgun sequence.
ACCESSION   DASRPQ010000070 DASRPQ010000000
VERSION     DASRPQ010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1534
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3145664"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1338
                     /locus_tag="VFD73_00805"
     CDS             <1..1338
                     /locus_tag="VFD73_00805"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI72571.1"
                     /translation="LERVARGEHVAHYETMRRRKDGSQIDVALTLSPIHATDGKIIGA
                     SSIQRDITERKRAEEALRQASKMEAIGALAGGLAHDFNNQLYAVSGFAHFIGRDASLS
                     PSGRADLLEIQKTTERMASLTRQLLAFARQQVLSPETLDLNAAVSDTSPMLRRLLGAA
                     TNVELVLSPGPKWVRVDRAQLVQVLLNLVINARDAMPEGGRIEIRTDTLEVSPGQVLD
                     RLQVAVEPGAYAGLTVTDEGEGIPPEHLSHIFEPFYTTKEVGIGTGLGLATVDGIVSQ
                     SGGHIQIRSSQGKGTRIKILFPLCGEPTPASSVDAISQQPGNSRGRILVVDDEEAVRS
                     IVGRMLQSEGYEVLRARDGLEALRELQEVGGAVNLVISDLVMPLMGGRVLGEELARRY
                     PGIPLVWISGHSRDVEFPRDTPGYEHPFLMKPVSPEALLETVSRTLHSTATSS"
     gene            1347..>1534
                     /locus_tag="VFD73_00810"
     CDS             1347..>1534
                     /locus_tag="VFD73_00810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72572.1"
                     /translation="MNARTEGATVSQHQLRGITVRVINSRPDIATRAVLERLDQALEL
                     IALYAPRRFRRMTQDLSG"
BASE COUNT          312 a          468 c          489 g          265 t
ORIGIN      
        1 ctggaacggg tggcccgggg tgagcacgtc gcgcactacg agacgatgcg gcgccgaaag
       61 gacggcagcc agatcgatgt cgcgctcacg ctttcaccga ttcacgccac tgacggaaaa
      121 attatcggag cctcgtccat ccagcgggac atcaccgaac ggaaacgggc ggaggaagcc
      181 ttgcggcagg cctcgaagat ggaagccatc ggcgcacttg ccggcggctt ggcgcacgac
      241 ttcaacaatc agctgtacgc ggtgagcggc tttgcccact ttatcggtcg cgacgccagc
      301 ctcagtccgt ccggtcgagc cgatttgctg gagattcaga aaacgacgga acgaatggca
      361 agtctgaccc gccagctcct cgcgttcgcc cgacagcagg tgctgagtcc ggagacgctc
      421 gatctcaatg ctgcggtcag cgataccagc cccatgctgc gccgcctgct gggagctgcc
      481 accaatgtgg agctggtcct cagccccgga ccaaaatggg tgcgggtgga tcgcgcgcag
      541 ctcgttcagg tcctgctgaa cctggtcatc aatgctcgag atgcgatgcc cgagggcggg
      601 cggatcgaga tccgaaccga cacgctcgag gtaagtcccg gccaggtgct ggaccggcta
      661 caagtcgcgg tggaacccgg ggcgtacgcc gggctgacgg tgaccgatga aggcgagggg
      721 attcccccgg agcacctgtc gcacatcttc gagccgttct ataccacgaa ggaagtcggt
      781 atcgggaccg gcctcggtct tgccaccgtg gacgggatcg tctcccagag tggcggccac
      841 atacaaatcc gaagctcgca gggaaaaggc actcgcataa aaatcctttt ccccctttgt
      901 ggggaaccaa caccggcatc ctctgtcgat gccatcagtc agcaaccggg aaattcgcgg
      961 ggccgcatac tcgtggtgga cgacgaggag gcagtccgct cgatcgtcgg acgaatgctt
     1021 caatcagagg ggtatgaggt actgcgtgcc cgtgacggac tggaggcgct gcgcgagctg
     1081 caggaagttg gaggcgctgt caacctggtc atctctgacc tggtgatgcc cctcatgggc
     1141 ggccgggttc ttggcgagga actggcccgg cgctatcccg gaattccact ggtatggata
     1201 tcgggacact ccagagatgt ggaattcccc cgggacacgc cgggatacga gcatccgttc
     1261 ctgatgaagc cggtctcacc cgaggcactg ctcgaaaccg tgagccgaac cctgcacagc
     1321 accgcaacct cctcctaagc gctgcaatga acgctcgcac ggaaggggca acggtcagcc
     1381 agcatcagct gcgcgggatt actgtccggg tgatcaactc tcgaccagac attgctacta
     1441 gggcggtgct cgagcggttg gaccaggcgc tcgagctgat cgcgttatac gctccgcgcc
     1501 ggtttcgccg gatgacccaa gatctgagcg gaat
//
LOCUS       DASRPQ010000071         1110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1888637, whole genome shotgun sequence.
ACCESSION   DASRPQ010000071 DASRPQ010000000
VERSION     DASRPQ010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1888637"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..98)
                     /locus_tag="VFD73_00815"
     CDS             complement(<1..98)
                     /locus_tag="VFD73_00815"
                     /inference="COORDINATES: protein motif:HMM:NF012239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HZI72573.1"
                     /translation="MSQARIRNFCIVAHIDHGKSTLADRLIEMTGAV"
     gene            166..>1110
                     /locus_tag="VFD73_00820"
     CDS             166..>1110
                     /locus_tag="VFD73_00820"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HZI72574.1"
                     /translation="MTANTSPDHSKIAPAPLPRGPAAAPVAADVGMLLVCLIWGLNFS
                     ITKLALHEIPPLPFTAIRFTCASVLLWAILRATEGPQTDEPQGIKRLILLGLVGNTAY
                     QLVFTVGLSRTTATNSALILSTVPMVVALMAGALGLERVTRRMGIGVVLGTLGVALVI
                     ATRGVAFDTKTMSGDVLSVLAVFCWASYTVWLRRVPAGVSPLRITTITTVAGTPGLVL
                     AGIPGLIRLDWRIVSWSAWLALAYAAVLSLVVAYLLWNRSVKLVGSTRTAIYMCVTPL
                     VAVCGAWLLLGEQPHPLQAVGAALIVAGVLLTRAQRTNA"
BASE COUNT          182 a          330 c          374 g          224 t
ORIGIN      
        1 accgcaccgg tcatctcgat gagacgatca gccagggtgg atttcccatg gtcgatgtgg
       61 gcgacgatgc aaaagttccg gattcgggcc tgggacatgg gccggaagat agcgagacag
      121 tggggcggga gggcagcggg ccagaacgtg attacacttg agcgcgtgac agccaacacc
      181 tctccagatc actcgaaaat tgctccggca ccgctgccgc gcggccccgc ggccgcgccg
      241 gttgcagccg acgtcggcat gctcctggtg tgtctcatct ggggcctcaa cttcagcatc
      301 acgaagctgg cgttgcacga aattcccccg cttccgttca cggcgatccg gttcacctgt
      361 gccagtgtgc tgctgtgggc gattctgcgc gcgaccgagg gtccccagac cgacgagcca
      421 cagggaatca agcggctgat tcttctcggc ttggtaggga acactgcgta tcagctggtc
      481 ttcaccgtcg gtctgtccag aaccactgcc acgaacagcg ccctcattct ttccaccgtc
      541 ccgatggtgg ttgcactcat ggccggtgcg ctggggctcg agcgcgtcac ccgcaggatg
      601 ggaatcggcg tggtcctcgg gacccttggc gtggccctgg tgatcgccac cagaggcgtg
      661 gcgttcgaca ccaagacgat gagcggagac gtgttgtcgg tgctggccgt gttctgctgg
      721 gccagctata ccgtttggct ccgtcgggta ccggctggag tcagcccgct tcggattacc
      781 acaatcacca ccgtggcggg aacgccggga ttggtgcttg cggggatacc gggtctcatt
      841 cggctggatt ggaggatcgt gagctggagc gcctggctgg cgttggccta tgcggcggtg
      901 ctctcactgg tggtggcgta cctgctctgg aaccgcagcg tgaagctggt aggcagtacc
      961 cgcacggcaa tttatatgtg cgtcactccg ctggtcgctg tttgcggagc gtggctcctc
     1021 ctgggagagc agccccatcc actgcaggcg gttggtgcgg cattgatcgt ggcaggcgtg
     1081 ctgctcacca gagcgcagag gacgaatgct
//
LOCUS       DASRPQ010000072         1019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1888640, whole genome shotgun sequence.
ACCESSION   DASRPQ010000072 DASRPQ010000000
VERSION     DASRPQ010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1888640"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            75..>1019
                     /locus_tag="VFD73_00825"
     CDS             75..>1019
                     /locus_tag="VFD73_00825"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HZI72575.1"
                     /translation="MTANTSPDHSKIAPAPLPRGPAAAPVAADLGMLLVCLIWGLNFS
                     ITKLALHEIPPLPFTAIRFTCASVLLWAILRATEGPQTDEPQGIKRLILLGLVGNTAY
                     QLVFTVGLSRTTATNSALILSTVPMVVALMAGALGLERVTRRMGIGVVLGTLGVALVI
                     ATRGVAFDTKTMSGDVLSVLAVFCWASYTVWLRRVPAGVSPLRITTITTVAGTPGLVL
                     AGIPGLIRLDWRQVSWSAWLALAYAAVLSLVVAYLLWNRSVKLVGSTRTAIYMCVTPL
                     VAVCGAWLLLGEQPHPLQAVGAALIVAGVLLTRAQRTNA"
BASE COUNT          161 a          309 c          346 g          203 t
ORIGIN      
        1 gggacatggg ccggaagata gcgagacagt ggggcgggag ggcagcgggc cagaacgtga
       61 ttacacttga gcgcgtgaca gccaacacct ctccagatca ctcgaaaatt gctccggcac
      121 cgctgccgcg cggccccgct gccgcgccgg ttgcagccga tctcggcatg ctcctggtgt
      181 gcctcatctg gggcctcaac ttcagcatca cgaagctggc gttgcacgaa attcccccgc
      241 ttccgttcac ggcgatccgg ttcacctgtg ccagtgtgct gctgtgggcg attctgcgcg
      301 cgaccgaggg tccccagact gacgagccac aaggaatcaa gcggctgatt cttctcggct
      361 tggtagggaa cactgcgtat cagctggtct tcaccgtcgg tctgtccaga accactgcca
      421 cgaacagcgc cctgattctt tccaccgtcc cgatggtggt tgcactcatg gccggtgcgc
      481 tcgggctcga gcgcgtcacc cgcaggatgg gaatcggcgt ggtcctcggg accctcggcg
      541 tggccctggt gatcgccacc agaggggtgg cgttcgacac gaagacgatg agcggagacg
      601 tgttgtcggt gctggccgtg ttctgctggg ccagctacac cgtttggctc cgccgggtac
      661 cggctggagt cagcccgctt cggattacca caatcaccac ggtggctgga acgcccggat
      721 tggtgcttgc ggggataccc ggtctcattc ggctggattg gaggcaggtg agctggagcg
      781 cctggctggc gctggcctat gcggcggtgc tctcgctggt ggtggcgtat ctgctctgga
      841 accgcagcgt gaagctggtg ggcagcaccc gcacggcgat ttatatgtgc gtcactccgc
      901 tggtcgctgt ttgcggagcg tggctcctcc tgggagagca gccccatcca ctgcaggcgg
      961 ttggtgcggc attgatcgtg gcaggcgtgc tgctcaccag agcgcagagg acgaatgct
//
LOCUS       DASRPQ010000073         1090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3146258, whole genome shotgun sequence.
ACCESSION   DASRPQ010000073 DASRPQ010000000
VERSION     DASRPQ010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3146258"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..>1090
                     /locus_tag="VFD73_00830"
     CDS             134..>1090
                     /locus_tag="VFD73_00830"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HZI72576.1"
                     /translation="MSTVELSLLGSFLLNVNGTRVRLPTRKAESLLAYLVLHRGVHHR
                     ERIASMFWGDSPDELARRSLRTALSSLRKEVGEDLLISDRETLQLNPVFPLRVDVHEM
                     EKQAREVTSGNPQAVIAPGLYPGDLLQDFYEEWILEERGYYRDLFVNALLRSAGSLRS
                     EGEYGRAIELAQKVVSVDPANERAYQHLIFCYGALGDRSAALKSYEDCAARLQELLGV
                     PPADDTNALVEQVKGSPSGGLRPSHVKSNLPLSLTSFIGREQELKTLQGVFQKTRLLT
                     LTGVGGCGKTRLAIELAGQLADRSAEGTWWAGLASVQEETLVA"
BASE COUNT          205 a          315 c          347 g          223 t
ORIGIN      
        1 aattcattac attccagacc ctccgaaaga aaccttcagg gtttgacagg aagtcaatcc
       61 gaatggcggt cggcgaaaga gaccctatag gtctgtttta cgatcctctc gtagtttggt
      121 attatgagaa acaatgtcga ccgtagagtt atccctgctc ggctcgttcc tcctgaacgt
      181 caacggtacg cgggtccggc tgccgacgcg caaggcggag tcgttgctgg cgtacctggt
      241 cctgcatcgc ggggtgcatc accgggaacg gatcgcctcc atgttctggg gagactctcc
      301 cgacgagctg gcacgcagat cgctgcgcac cgcgctttct tccctgcgta aggaagtggg
      361 ggaagatcta ctgatcagtg accgcgaaac gctgcagctg aatcctgtgt ttccgctccg
      421 ggtggacgtg cacgagatgg aaaaacaggc cagggaagtc acctccggga atccgcaggc
      481 ggtcatcgct cccggcctgt atcccggtga cctgctgcag gacttttacg aggaatggat
      541 cctggaggag cgcgggtatt accgggatct ctttgtgaat gcgctgctcc ggtctgccgg
      601 gtccctgcgg tcggaagggg aatacggccg cgcgatcgag cttgcgcaaa aggtcgtttc
      661 ggtggacccc gccaatgagc gcgcctacca gcacctgatc ttttgttacg gcgcactcgg
      721 ggaccggtcg gcggcgctca agagttatga agactgtgct gctcggctgc aggagctcct
      781 gggcgtgccg cctgccgacg atacgaacgc actggttgaa caggtcaagg ggtctccttc
      841 cggtggactc cggccctcgc atgtgaaatc caatctaccc ctttccctga ccagtttcat
      901 cggtcgtgaa caggagctca agaccctcca gggcgtgttc cagaaaacgc gtctgctcac
      961 cctgacgggc gtcggcggct gcggaaaaac ccgccttgcg atcgagctcg ccgggcaact
     1021 ggcagatcgt tctgcggagg ggacgtggtg ggccgggctg gcctcggtgc aggaggagac
     1081 gctggtcgcg
//
LOCUS       DASRPQ010000074         1193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1261615, whole genome shotgun sequence.
ACCESSION   DASRPQ010000074 DASRPQ010000000
VERSION     DASRPQ010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1261615"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VFD73_00835"
     CDS             <1..276
                     /locus_tag="VFD73_00835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72577.1"
                     /translation="APSSLAAQPLVVPGTEADFVNGLVKQRQRAPGGEHADGGPYQMA
                     TPVDDIGQGTRRQSEEEDRKLGDRFGRCRLLKAQRASILGIFRQRYC"
BASE COUNT          227 a          374 c          375 g          217 t
ORIGIN      
        1 gcacccagca gtttggcagc ccagcctctt gtggtgccgg gtactgaggc cgattttgtc
       61 aacgggctgg taaagcagcg ccagcgcgcc ccaggcggcg agcatgccga cggtggccca
      121 taccaaatgg cgacgccggt cgacgatatc ggccagggca cccgccggca gagcgaggag
      181 gaggaccgga agttgggaga ccgattcgga cgctgccgac tgttgaaggc gcagagagcc
      241 agcattttag gaatcttccg ccaaagatac tgctgaacat tggcgaattt ccgatagcga
      301 acgagagccc acctgccagg aagctgcgct tcattgagtg ccgctcatgt ctcctggcga
      361 ctgaccgcag ccaggtccgg ctgggcagca agcttctctc gtcagctgcc tggtcgggcg
      421 ccgtagcgaa cgcagccggc cacgcccgta aaggagattc cgcatgccag caacgatagc
      481 tcgaagaatc cacacgacgt gcgccgagcg gaagcccctc ccaggtgtaa acttgcaacc
      541 ttgtcgggta acttcgctcg ttcggcaggt ggacggtcga gcacgtgctg tctgtgaccg
      601 aatccccaaa gccattcctc cctcgaagga gtgggggcag tgatggttcg gatcaccttt
      661 gctgtctttt cccttgccct aggcggctgc acggcgggcc tgtcgaccaa cttcacccaa
      721 gttcaaggcc cgtcattcag tgcaccgcag cgtcttccct gggcctgttg ggcggcgtcg
      781 ccggatggca ggaatgcacg ggtcctcaat ccggaagtcc ttccgaaagg gataacggtg
      841 agtgccgaac cccctgcgac gttttcggcg atgatccact gcattcttcc agggctggac
      901 tgggtagcgt ctggctcacc cttgccacac ggtagtgagg cgcacctggg cccggcgatg
      961 tgccgaggcc ggagtgggac ctgctccgaa tctcggacgc tggggagaac tgggggctaa
     1021 cccgctcgcg ccgatcagtg gcatgatctg ctgaagatcg tcgacgaccg gcacagccgg
     1081 gccggcagca tcgtcaccgg ccaactccca gtgaccgcgt gccgcaaatg ggtcgccgac
     1141 cccactctct gggatgctgc ccttggaacg ctagtcatca gagctaacct tat
//
LOCUS       DASRPQ010000075         1190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3455521, whole genome shotgun sequence.
ACCESSION   DASRPQ010000075 DASRPQ010000000
VERSION     DASRPQ010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3455521"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            146..952
                     /locus_tag="VFD73_00840"
                     /pseudo
     CDS             146..952
                     /locus_tag="VFD73_00840"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
BASE COUNT          239 a          352 c          389 g          210 t
ORIGIN      
        1 gccagcacga agagaacgcc ctggcgtcgg atactgccaa tgaccgcgag cgcacggccc
       61 tcaaacgggt gacgctcgcg ggtaaccgtt accgaagcgg ggaaatctcg gcgatgggta
      121 gtctgtcgcc gcttccttcg attccgttga ccccggatgg ctgatgcgga tgttggggca
      181 caggattgct gacctccggg tcctccgctt gatcgagcgg tggctcaggg ccggcgtcct
      241 cgagagcggc cgatgggaac cgggggagat gggggtgccg caaggatctg ggatcagccc
      301 aatccttgcg aacgtctttc tccattatgt cgtcgacctc tggatccacc aatggcggcg
      361 acatcgagca gccggacagg tcatcgtgtg tcggtatgcg gatgacctgg tgatcggctg
      421 tcagtacgga acggagggga gaaagctcct cggagcgctg acacaaaggc tggcgcaatt
      481 cggcctgtcg gtccacgagg gcaagacccg gctgatcgcg ttcgggcggt tcgctgccga
      541 gcgccgagcg gccgccgggc aacggcgccc ggagaccttc aactttctgg ggttcacgca
      601 ctattgcggg aagaccagaa acgggaggtt catggccaag cggaagacgc aagcgacacg
      661 cctagtccga aagctgaggg cgctccgaga ggacatgctg cggcggatgc acgccccggt
      721 tcgggagcag catcggtggc tatgccaagt gctgagaggt cactatcagt actacggggt
      781 catcttcaac tatagctcac tacgcgcgtt caaagactgc gtcgtcaggc tctggcgcaa
      841 gacactcggc aagcacagcc agaagggccg cgtgacctgg gcgtcctata gccggctcct
      901 ggccgccttg ccgctccctg aaccggttat ccatcaggct tggcacagat gatcaatccg
      961 cctcaggtcc gtcctgaaga gcccactgcg gtaacgccgc acggtgggat ctgtgggggc
     1021 aaaagtcagt aatggctaag ctacccgaca aagccgcacg tacggttctg tgcggggggc
     1081 gctcagtaat ggacgtccct accgcgatcg gctttgactg cctccaatac tttctgcaca
     1141 ggcacaagat atagaaaacc gggcggcagc tcgacttacg accccgagcg
//
LOCUS       DASRPQ010000076         1405 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1574799, whole genome shotgun sequence.
ACCESSION   DASRPQ010000076 DASRPQ010000000
VERSION     DASRPQ010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1405
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1574799"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(286..708)
                     /gene="mnhG"
                     /locus_tag="VFD73_00845"
     CDS             complement(286..708)
                     /gene="mnhG"
                     /locus_tag="VFD73_00845"
                     /inference="COORDINATES: protein motif:HMM:TIGR01300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0098662 - inorganic cation transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation/H(+) antiporter subunit G"
                     /protein_id="HZI72578.1"
                     /translation="MTNAADLPAWAALPTALLLVLGAGLALTGSFGLLRLGSFYERIH
                     APTLGTTMGIGCVLGASMLFFSVLQTRLVLHELLIAAFMVVTTPVTLMLLARAALYRD
                     RSEGCDEVPPPPLPSAAVRPHALVNAREAAIDDGHEPT"
     gene            complement(705..986)
                     /locus_tag="VFD73_00850"
     CDS             complement(705..986)
                     /locus_tag="VFD73_00850"
                     /inference="COORDINATES: protein motif:HMM:NF004812.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015075 - monoatomic ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="K+/H+ antiporter subunit F"
                     /protein_id="HZI72579.1"
                     /translation="MSTALLNWSILLAQILLALAMGCATYRLLRGPRAQDRVLGLDTL
                     YVNAIMLLLTFGMRSGSTLYFEAALIIALLGFVATAALAKFLMRGEVIE"
     gene            complement(983..>1405)
                     /locus_tag="VFD73_00855"
     CDS             complement(983..>1405)
                     /locus_tag="VFD73_00855"
                     /inference="COORDINATES: protein motif:HMM:NF014012.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit E"
                     /protein_id="HZI72580.1"
                     /translation="GSVAAGTVVLGGVLAIGAARALMTLAPPKTRLRRPRAVFRLALV
                     VLAEIVRSNWAVARIILLPGMRQRRSGFVRIPLDMHAPYGLAALACIITATPGTLWVE
                     YDSADNTMLLHVLDLIDEEEWVRIIKGRYEKRLMEIFE"
BASE COUNT          282 a          456 c          434 g          233 t
ORIGIN      
        1 tgtcccgacc cctggaggaa gcgtgtggcc acccgaccac tctcactctc ggcctcttcc
       61 agcatgctct cgtggctgaa atagacgcgg gaaatccgga gcatagtctc cccatcctcg
      121 aaaaaacctc tgggtcagtg atccggcact gcgagattga gccagtctcc caagctactc
      181 tgccggcaag atctctgact ttgatccatt ggacgccgcc ggagcggcgt tccaaaatgc
      241 ggtgctgctt ctgcaggtgg taggccacgg cgcgagtaaa aaccctcatg taggttcatg
      301 cccgtcatcg atggctgctt ccctggcgtt taccaaggcg tgcgggcgaa ccgctgcgga
      361 tggtaagggc ggcggcggta cctcgtcgca gccttcgctg cggtcacggt acagtgccgc
      421 gcgcgccagc agcatcaggg taacgggtgt ggtgacgacc atgaaggccg cgatcagcag
      481 ttcgtgcagt accaggcgcg tctgcagcac ggagaagaag agcatggagg caccgagcac
      541 acagccaatt cccatcgtcg tacccagcgt cggagcatgg atccgctcat agaagctccc
      601 gagccgcaac agcccgaacg aaccggtcag cgccagtccg gccccgagca caagcagcag
      661 tgctgttggc agcgccgccc aggctggaag atccgcggcg tttgtcattc gatcacctct
      721 ccacgcatga ggaacttcgc cagggccgct gttgcgacga agcccagcag ggcgatgatc
      781 agagccgcct caaagtaaag cgtgctgccc gagcgcatgc cgaaggtcag cagcagcatg
      841 atggcgttga catacagggt gtcgagcccg agcacccggt cctgcgcccg cggtccccgc
      901 agcaacctgt acgtagcaca gcccatggcc agggccagga ggatctgagc caggagaatg
      961 gaccagttca acagtgctgt gctcattcga atatctccat cagccgcttc tcatagcggc
     1021 ccttgatgat ccgcacccac tcctcttcat cgatcaggtc gaggacgtgc agaagcatgg
     1081 tgttgtcggc ggaatcgtac tccacccaga gggtgccggg cgtggccgtg atgatgcagg
     1141 ccagcgccgc caatccgtaa ggagcgtgca tgtcgagcgg aattcttacg aaaccggatc
     1201 tccgctgccg catccccgga agcaggatga tccgggcgac ggcccagttg gaccggacaa
     1261 tttcggccag gaccaccagt gccagcctga ataccgcgcg cggccgccgg agcctggtct
     1321 tcggtggggc aagcgtcatc agggcccggg cagcgccgat cgccaggacg ccgcccagga
     1381 ccacggtgcc cgcggccacg ctccc
//
LOCUS       DASRPQ010000077         1459 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2519763, whole genome shotgun sequence.
ACCESSION   DASRPQ010000077 DASRPQ010000000
VERSION     DASRPQ010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1459
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2519763"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            144..1190
                     /locus_tag="VFD73_00860"
     CDS             144..1190
                     /locus_tag="VFD73_00860"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HZI72581.1"
                     /translation="MLTGRGAPFTTKLIAVVLSVGALALGREFFIPIALALCFQALLT
                     PAVRGLGRLRIPAPAGAAIVVLGALAVFGIGGRALSGPVSAWVNKAPSDIATARRRLR
                     ELGRPLGRLTDAAEGTPAVNPPAAAPDAPRPPAPAQALFTRLLGHATTLVVGLLEVIV
                     LVYLMLAAGNMLFRKLVKLLPSPDELRTATDILNKTESIVAKYLRVTALINLGQGIAV
                     GLAMWAIGMPDPFIWGLMTFVLEFIPYLGGAINVGLLLISGFSVFSGLGQVLLGPAIY
                     LIISTLQNNVVSPYVYGNRLKLNPLAVMIFVLFWWFIWGIPGVFLSIPIAATLKVLGD
                     QLPRLAPLGELLGE"
     gene            1220..1292
                     /locus_tag="VFD73_00865"
     tRNA            1220..1292
                     /locus_tag="VFD73_00865"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1253..1255,aa:Ala,seq:cgc)
     gene            1297..1369
                     /locus_tag="VFD73_00870"
     tRNA            1297..1369
                     /locus_tag="VFD73_00870"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1330..1332,aa:Gln,seq:ctg)
BASE COUNT          218 a          465 c          469 g          307 t
ORIGIN      
        1 cgaccaaggt ctcgctcaag cacatctggc agccgtccgg ctttcgctcc tggctcaacg
       61 ggcagttcta ccgccggcgt aatgcgcgcc gcatgttcga tgggctgatc aacaacatcc
      121 ggaaagcgct gacgcgctga gctatgctca cgggccgagg cgctcccttc accacaaaac
      181 tcatcgcggt cgttctttcg gtcggcgcac tcgcgctggg ccgagagttc tttatcccga
      241 tcgccctggc actgtgcttt caggcgctgc tgacgccggc cgtccgtggg ctgggacggc
      301 tgcggatccc cgcgccggcc ggcgcagcga tcgtggtgct cggcgcgctc gcggtgttcg
      361 gcatcggggg tcgggcgttg tcggggccgg tgagtgcctg ggtgaacaag gcgccgtcgg
      421 acatcgccac cgcacggagg aggctgcgcg agcttggccg accgctcggc cggttgaccg
      481 atgcggcaga gggaacgccc gccgtcaatc cgccggctgc ggcgccggac gcgccgcgac
      541 ctcccgcgcc cgcccaggcg ctcttcaccc ggctgctggg acatgcgacc acactcgtgg
      601 tgggactgct cgaggtcatc gtcctggtct acctgatgct cgcggcgggg aacatgctgt
      661 ttcgcaagct ggtgaagctg ttgccgagcc ccgatgaatt gcggaccgcg accgacatcc
      721 tgaacaagac cgagtcgatt gtggcgaagt atctccgggt cacggcgctc atcaacctgg
      781 ggcaaggcat tgccgtcggt ctcgccatgt gggcgatcgg catgcccgat ccattcatct
      841 ggggcctcat gacgttcgtg ctcgagttca tcccgtacct ggggggcgcg atcaatgtcg
      901 ggctactctt gatcagcggc ttctcggttt tctcggggtt ggggcaggtg ctgctcgggc
      961 cggcgatcta tctcatcatc agcacgctcc agaacaacgt ggtctcgccc tatgtctacg
     1021 gtaatcgcct caagttgaac ccgctcgccg tcatgatctt tgtgctgttc tggtggttca
     1081 tttgggggat cccgggtgta ttcctctcca tcccaatcgc cgcgacattg aaggtgctgg
     1141 gcgatcagtt accgcgactc gcgccgctgg gcgagttgct tggagaatag attgggaatg
     1201 gttacttttc gggcccttcg gggctgtagc tcagctggga gagcgcctgg atcgcaccca
     1261 ggaggtcagg ggttcgagcc ccctcagctc catcagtgcc ccttggtgta actggcaaca
     1321 cgcctgactc tggatcagga gagtcctggt tcgatcccag gaggggcaat cttcgagggc
     1381 cgcggcggcc gaatggccgc cgctttttgt tgcccataac tttcctgcct ccatgaccat
     1441 atcgctcctg ccactcctg
//
LOCUS       DASRPQ010000078         2573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1574905, whole genome shotgun sequence.
ACCESSION   DASRPQ010000078 DASRPQ010000000
VERSION     DASRPQ010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2573
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1574905"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..514
                     /locus_tag="VFD73_00875"
     CDS             <1..514
                     /locus_tag="VFD73_00875"
                     /inference="COORDINATES: protein motif:HMM:NF013116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transaldolase family protein"
                     /protein_id="HZI72582.1"
                     /translation="ISRVDSEVDTRLDQIATPQATQLKGKAAIANARLAYQAYQEVIT
                     SQRWQKLAVLGAQPQRPLWASTGVKNPAYPDTMYVTELVAADTVNTMPRTTLAAFADH
                     GEVTGNTITGRYHDARRVLDQLTTIGVDFEDVTDQLEREGLAKFEESWNQLSHTIAAE
                     LHRSHPARQS"
     gene            complement(1033..1206)
                     /locus_tag="VFD73_00880"
     CDS             complement(1033..1206)
                     /locus_tag="VFD73_00880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72583.1"
                     /translation="MDALVVAPLAAMLICRAPGSAARAIQQAREMTGREDPRLTSLAD
                     GLSVNDTFVPRVA"
     gene            complement(1644..2129)
                     /locus_tag="VFD73_00885"
     CDS             complement(1644..2129)
                     /locus_tag="VFD73_00885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72584.1"
                     /translation="MRISAWFVEMHKDSHGEDSHGEDPRREAWLPPELRGRAADVELL
                     NNSADPVTDVLIFLSRVSYKVQRWWDQEPEYRVMIGVLPPGRWTIRVPKSGGAIVDVK
                     LGGSPAMSRVMVIISFTDNAGNHWARGARGELRQLTTPAIDYWKVNKEDIDWRAPRRL
                     D"
BASE COUNT          512 a          883 c          766 g          412 t
ORIGIN      
        1 catctcccgg gtggactccg aagtcgacac ccggctcgac cagatagcga ccccccaggc
       61 cacccaactc aagggaaagg cggctatcgc caacgcccgc ctggcctacc aggcttatca
      121 ggaagtcatc accagccagc gatggcaaaa gctggctgtg ctcggggctc agccgcagcg
      181 cccgctctgg gcctccaccg gcgtcaagaa ccccgcctat cccgacacta tgtatgtgac
      241 cgagctcgtc gccgccgaca ccgtcaacac gatgcccaga accaccctgg cagccttcgc
      301 cgaccacggc gaggtgaccg gcaacaccat cacgggccga taccacgatg cacgccgcgt
      361 cctcgatcag ctgacaacca tcggcgtcga cttcgaagac gtcaccgacc aactcgagcg
      421 cgaaggcctc gccaagttcg aggagagctg gaaccagctg agccacacca ttgccgccga
      481 actgcatcgc agccaccctg ccaggcagtc ctgacccggc cgcgacagcg gaccggatcc
      541 cttagcaaat cgcctgcacc cggaggcggt cttgatctca ttcgcctgtt cagcggtttc
      601 aagggagcca tgcggcgttg ccagtcaggc cggttccagg gtcgcgatct tcgatgcgcc
      661 gccgatcggc gaggggcgag gaggctgatg gcaatatccg caaggtttga gcggcatccg
      721 gcatggaaga tggcagccac cggatcgtcg cgttcagggc cgttgccctg ggacaaagag
      781 gagtaagtca tgggtgtggc taagaaggcc aaacaagggg caaagtcaat aaagggcgac
      841 actaagaaag gcgcaggcaa agtcaagcat aaaggcaaga aagccaagaa tgccgcgaag
      901 cattaatcag gcgatctggc accgacagcc cgccgggaat catgtgcttc tgtttcacta
      961 tctgtgatcg tccccagctc gccacatgat ccgtcggatc cgatctggca ttgcctgcgc
     1021 atgccgcaca cctcaggcaa ctcgggggac gaaagtgtca ttgacagaaa gcccgtcggc
     1081 caggctggtt agccgcgggt cttccctgcc cgtcatctcg cgcgcctgct ggatggcccg
     1141 ggccgccgaa cccggcgcgc ggcagatgag catggcggcc agcggcgcga cgaccagcgc
     1201 gtccacgtgt cctacgacga catgcggccc cacgcagcag cagccgccaa cttcccgcgc
     1261 acccccgaag agatcacccc accggaccgt ccaacaggga cggcaagccg agtaacgccg
     1321 ccccgcacga ggccaggcgg cggcaccccg cttcccgcgg tactgtggct gcgcggcaag
     1381 gaagcgcagc tgccgcgcat ctgctagtcc tgccacaggc ccggatcgca gaggcgtgac
     1441 cagcagagca ctaggacctc agaaccgggc agcaccgcag cgaagtgggc ggccgtaggc
     1501 tcccatgacg tcaggtgcgg ctgggtgcgg cgatctggag ctggtgtgcc cgttcctatc
     1561 ggtgcatcag cgctgggcat cggcaagctt gcccgatacc cctacccccg ccacatttcg
     1621 aggtgcgcca gatacccctt tgttcaatcc aagcgtctgg gcgcccgcca atcgatgtct
     1681 tccttgttga ccttccagta atcgatggcg ggggtagtca gctgccgtag ttctcctcta
     1741 gctcccctcg cccagtggtt acccgcattg tcagtgaaac tgataatcac catcacgcgg
     1801 gacatggcgg gtgatccccc cagtttgaca tccacgatag cgccaccgct cttaggcacc
     1861 ctgatggtcc atcgtccggg tggaagcaca ccgatcatga cccgatactc cggttcttga
     1921 tcccaccagc gctggacctt gtacgagacc cgcgatagga agatcaggac gtcggtcacc
     1981 gggtctgccg aattgttgag aagctcaacg tcggcagccc ggccccgcag ctctggggga
     2041 agccaggctt cgcgacgcgg gtcttcgcca tgcgaatctt cgccatgcga gtctttatgc
     2101 atctcgacga accacgccga tatcctcacg gcttgttgcc tgagttcccc ggcgcaagcg
     2161 ctccttccgg tccccccggg tttcccacag cgcgagggag actgctgcga cggtcccgac
     2221 cgaggccacc caggtagcga cggtccccca ctgcaaggcg ctcatattgt catgatgggg
     2281 gacggatcgg gctgtccaac agggcccaac ggatccaaag acaggccggt cacccaggca
     2341 attccgactg gacagccccg ccaggtgcgt ctgctgtaag cctgtcgccg gacggcccga
     2401 tgggtcggac catagtgcga taacggcgtg gccgccagga cccggtctca ttgctctgcg
     2461 gctacccggc acaatcagtc agtcgcgccc gccacctcga cgctctgacc gaggtgtgcc
     2521 gcatccacgc agaggtcatc ggcggcctgt ccacgctgga acaagcccgg ccg
//
LOCUS       DASRPQ010000079         2033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2829464, whole genome shotgun sequence.
ACCESSION   DASRPQ010000079 DASRPQ010000000
VERSION     DASRPQ010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2829464"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..605
                     /locus_tag="VFD73_00890"
     CDS             <1..605
                     /locus_tag="VFD73_00890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72585.1"
                     /translation="LSFVHDNSLWIPSGPIDGGRLSFTAGISSDFTNSRFDSYVLIGD
                     WRRYFRLGSRSTYAVRGFGFYSGGDRPHRTNIGGTVGLRGYPEFGYIVGTRAYMLNQE
                     IRFPLLTHLTLGTPVGDVDFPEIQGAIFTDLGKALLHQDFDRALLGSYGLSFRLALGP
                     LAVLRLDVGRRFTNRDYQGYSLSDQQKKPGFVHFFFGYNY"
     gene            605..1309
                     /locus_tag="VFD73_00895"
     CDS             605..1309
                     /locus_tag="VFD73_00895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72586.1"
                     /translation="MPQCVRLDRQLLLVYLGVAGWACRNAPGPLLPVGAQPVSRPQVL
                     AWVDSTRTHGHELYRFKWLFRDERGSAGGRGSARIAPPDSLRFDVAGPFGSGAASAVV
                     VGDQALWMEPPDAIAKLVPNYPLMWAMFGITQEPPDQAALSGIFNDRLLAWQYAGPTD
                     TVVYALSSGDPRRLVAEVHQSGSLIGRAETTFKPDGAPLKSRLTVPSGPAQLDLTFLS
                     TEQASFAPEIWLPRKH"
     gene            1332..1772
                     /locus_tag="VFD73_00900"
     CDS             1332..1772
                     /locus_tag="VFD73_00900"
                     /inference="COORDINATES: protein motif:HMM:NF016290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptE family protein"
                     /protein_id="HZI72587.1"
                     /translation="MYGFAGGGLPPSIKTVAVLPFDNQTPEPTLTQEISRAVREAVEQ
                     RLGLRQSAEPQADAVVRGSITRYEPDLPVAYTGGDSSVTVTRRQVEITVSVEIRDQKQ
                     NKALWERSGLTVRGDYEPGQEAVGRQKALDDLVVNIVEGAQSQW"
BASE COUNT          343 a          640 c          623 g          427 t
ORIGIN      
        1 acctgagctt tgtgcacgac aactcacttt ggattccgtc cggtccgatt gatggcggac
       61 gactgagctt caccgccggt atctccagcg attttaccaa cagccgattc gacagctacg
      121 tcctgattgg tgattggcgc cgctacttcc gactgggaag ccgaagcacc tacgccgtcc
      181 gcggttttgg tttctatagc gggggagatc ggccccatcg gaccaacatc ggaggaacgg
      241 tgggccttcg cggctatccc gagttcgggt acatcgttgg tactcgggca tacatgctga
      301 atcaagagat tcggtttccc ctcctgaccc acctcacgct gggaactccg gtgggagacg
      361 tcgattttcc ggaaatccag ggcgcgattt ttaccgatct gggaaaggcg ctgctccatc
      421 aggacttcga tcgcgctctc ctcgggagct atggtctgag tttccggctg gccttgggtc
      481 cccttgccgt gctgcgtctg gacgtcggac gccgcttcac caaccgagac taccagggct
      541 acagcctcag cgaccaacaa aagaaacccg gcttcgtgca tttcttcttc ggttataact
      601 actgatgcca caatgcgttc ggcttgaccg ccagcttctc ctggtctatc ttggcgtggc
      661 tggttgggct tgccggaacg ccccggggcc tttgctcccg gtcggtgcgc agccggtcag
      721 ccggccgcaa gtcctcgctt gggtcgactc gacccggaca catgggcacg agctgtatcg
      781 gttcaagtgg ctgtttcgtg atgagcgtgg cagtgccggc ggtcggggga gcgcccgcat
      841 cgcgccgccc gattctctgc gcttcgacgt tgccgggccc tttggaagcg gcgccgcatc
      901 ggcggtcgtt gtcggcgatc aggcgctttg gatggagccg ccggacgcga ttgcgaaatt
      961 ggtgcccaac tacccactga tgtgggccat gttcggcatc acccaggagc cgcccgacca
     1021 ggcggcgctg agcggaatct tcaacgaccg tctacttgcc tggcagtacg cagggcccac
     1081 tgacactgtc gtatacgccc tgagctcagg agacccgcgt cgcttggtgg ccgaagtgca
     1141 tcagtcgggc tcgctgatcg gccgggcgga gaccacgttc aagcctgatg gagctccttt
     1201 gaagtcgcgg cttaccgttc cgagcgggcc ggcgcaactc gatctcacct ttctttccac
     1261 cgagcaggcc tcctttgcgc ctgagatttg gcttcctcgc aagcattagc acgctgaccc
     1321 tgactggatg cttgtacggg tttgccgggg gcggtcttcc gccctcgatc aagaccgttg
     1381 ccgtgttgcc gttcgacaac caaacgcctg aaccgaccct gactcaggaa atttcccggg
     1441 cggtgcgtga ggcggtcgaa cagcggctgg gactccggca atcagcggag cctcaggccg
     1501 atgccgtggt ccgaggctcc atcactcgct atgagcctga cctccccgtg gcgtacaccg
     1561 gaggggacag ctccgtcact gtcactcgcc gtcaggtcga gatcaccgtc tcggtggaga
     1621 tcagggacca gaagcagaac aaggcactct gggagcgaag cgggctcacg gtgaggggag
     1681 actacgaacc cggccaggaa gctgtaggcc gccaaaaggc attggacgac ctggtggtca
     1741 acattgtcga aggcgcccag tcgcagtggt aggcctggcc tcggtaccgg gcaacacttc
     1801 tcctccgtcc ccgacctcat cgctcccctg ccagtaaact gatgcaccca cagatcggcc
     1861 attggctgta gcgtgcacca gatctccatt cccgagcttt ttctcgtcct cgccgcggtg
     1921 ctggttgggg ccaagctcct cggtgaactc gccgagcgaa ttgggcagcc ctcggtcctt
     1981 ggtgagctgg ttgccggtgt cctgctgggg caaagtgtgc tcggcgtcat tcc
//
LOCUS       DASRPQ010000080         5021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2829571, whole genome shotgun sequence.
ACCESSION   DASRPQ010000080 DASRPQ010000000
VERSION     DASRPQ010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5021
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2829571"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..242
                     /locus_tag="VFD73_00905"
     CDS             <1..242
                     /locus_tag="VFD73_00905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72588.1"
                     /translation="RGIALEGVETTIHGDLDLRGFLGLDSDVRPGYEQIQVTIKVAGD
                     FDDDQFAELASLIRYSPVRDIVRNPVPVAVDVARA"
     gene            complement(355..1359)
                     /locus_tag="VFD73_00910"
     CDS             complement(355..1359)
                     /locus_tag="VFD73_00910"
                     /inference="COORDINATES: protein motif:HMM:NF019350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HZI72589.1"
                     /translation="MIAVHEQRESSTAARILEQALRRLLENPSAFSYGALAISALIVL
                     PRGFDSVQDFGLFVVEVAAYAAWLPLWARRRAQDPTGRSAWTVGMAFLGNLLLATLAA
                     RHLGFTLVATTILPQYFTTLALPVAALSFVPMFIASEYSHTAAVLANPSSIPWDMALI
                     RGAAVILIGICFKVLAMQIEERVRLQRSLSSAERKAGMLEERQRLAREIHDTLAQGFA
                     SILVHFERAEQIDPLAASPARPHLQLARSVAHEGLEEARRMLAAMRPEILEQRALPEA
                     LGRVCEEWSRRTGIDAKLSVTGSPAPLHPDIELTVLRGTEERSIQVRFGQDGQPEGSA
                     "
     gene            1835..2380
                     /locus_tag="VFD73_00915"
     CDS             1835..2380
                     /locus_tag="VFD73_00915"
                     /inference="COORDINATES: protein motif:HMM:NF024978.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4136 domain-containing protein"
                     /protein_id="HZI72590.1"
                     /translation="MRQRAIATLMGTAMAALLSTSLMAQDVSYDYDRSVDFTKLKTYA
                     WVPGTNLSDELNHKRIVDAIDAQMAMKGLVKVDSGTNADVLIAYQTAFDKNLEINGFS
                     TGWAGYRFGRTGSARVEEVVVGRLAVVMIDAKTHALLWRGIATRDVDANASPEKRDKN
                     INKAAEKLFKKYPPTSHPPID"
     gene            2460..2624
                     /locus_tag="VFD73_00920"
     CDS             2460..2624
                     /locus_tag="VFD73_00920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72591.1"
                     /translation="MVATFNGWDDMPEAERESLEQWEREHEGQSSAWALPTRFSMLFP
                     VALSLPVIAQ"
     gene            2648..3640
                     /locus_tag="VFD73_00925"
     CDS             2648..3640
                     /locus_tag="VFD73_00925"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HZI72592.1"
                     /translation="MQRATWLLAVLAMACSGKRPAQVVAEGTIEVAETDVVPRIDGRI
                     SRIWVAEGDRVRAGDTVATLVSSTMPEDLREREARVAQAEAELRDLERGSRPEEIARA
                     EAELRTAQAEDLRAARDLERMESLGAANAVSQQEVDQARAAAGEARGRRQASEHSLEL
                     LREGPTREAREAARSRLAEARAFLAQGKASNGELILLAPADGVIMPYYYRVGEAVESG
                     DPVLTIADVTRPWIRVYVNQRDLPGLRIGATAEAVLDGDTRQAIPGRIVAINHKAEYT
                     PRVALTTDERADLMFGVKVALSNPSGTAQAGLPATVRLARHTAETSTQIAEARP"
     gene            3637..4383
                     /locus_tag="VFD73_00930"
     CDS             3637..4383
                     /locus_tag="VFD73_00930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI72593.1"
                     /translation="MTSSVAVETLGMRKVFGHLVAVDSLDLTVARGTVFGLLGSNGCG
                     KTTTIRMLCGLLIPTSGSATVVGLDVATQGEAIRRRIGYMCQKFGLYDDLTVRENLRF
                     YSSIYGLRREQLAARMEEQLTDLRLTKRVDQLVGTLSGGWKQRVALACATAHRPELVF
                     LDEPTAGVDPAARRLFWEIIYELANTGTTIVVTTHYMDEAARCQRLGFMSKGKLIAHG
                     TQDEILHHFGQPTVEDVFVELQRKDEGVAA"
     gene            4380..>5021
                     /locus_tag="VFD73_00935"
     CDS             4380..>5021
                     /locus_tag="VFD73_00935"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI72594.1"
                     /translation="MRLLKRMRDSSLWPMLWKEFRQMRRDRFTVAMLVGLPSVQLLLF
                     GYAIRTEVRHVPMLVLDQSQTQESRALTTLLTNTQNFDVAGMARGQSEVDRRIASGNV
                     RAALIIPPDFSRDLKRGRGATAQVIVDAVDPLSASAAISAAGLASQTDLLALTRGEPV
                     PQPPLEVRVRPRYNPGLVSAFNIVPGLIGVLLTMTLVAITAMALVRERERGTLE"
BASE COUNT          920 a         1627 c         1655 g          819 t
ORIGIN      
        1 cgcgcggcat cgccctggaa ggcgtggaga ccacgatcca cggcgacctg gacctgcgcg
       61 gcttcctcgg cctggacagc gatgtccgcc ccggttacga gcagatccag gtgaccatca
      121 aggtcgctgg cgacttcgac gacgatcagt tcgccgaact cgccagcctc atccgctact
      181 cacccgtccg ggacatcgtc cgcaaccccg tccccgtcgc cgtcgacgtg gcccgcgcct
      241 gagcggtccg cacgatgtcc gcgccagcca tcccggcggc gcggacatcg tgcccggcgc
      301 ccggcgtgca ccaaggtccg ttcggcccct ggtcgtcagc aggggagaag ctggtcaggc
      361 tgatccctcg ggctggccgt cctgaccgaa ccgtacctgg atgctgcgct cttcggtgcc
      421 gcgcagcacg gtcagctcga tgtcggggtg cagcggggcc ggtgagccgg tgaccgaaag
      481 ctttgcgtcg atgccggtgc gacgggacca ctcttcgcag actcggccca gcgcctcggg
      541 caacgcccgc tgctccagaa tctccggccg catcgctgcc agcatccggc gggcctcctc
      601 cagtccttca tgcgcgaccg agcgggccag ttgcagatgg ggccgggcag gcgacgctgc
      661 aagcggatcg atctgctctg cccgttcgaa gtgcaccagg atgctggcaa atccctgggc
      721 caacgtgtcg tgaatctccc gcgcgagccg ctggcgttcc tccaacatgc cggccttccg
      781 ttcggccgac gacaagctcc gttgcagtcg gacgcgctcc tcgatctgca tggccagcac
      841 cttgaagcag atgccgatca ggataaccgc cgcacctcgg atgagcgcca tatcccacgg
      901 gatgctcgag ggattggcca gcactgccgc cgtgtgggag tactcggacg caatgaacat
      961 gggtacgaac gacagggccg cgaccggcag cgcgagcgtg gtgaagtact gcggcagaat
     1021 cgtcgtggcg acgagggtaa acccaaggtg ccgggcggcg agcgtcgcca gcagcagatt
     1081 gcccagaaag gccatgccaa ccgtccaggc actccggccg gtgggatctt gggctcgcct
     1141 gcgagcccaa agtgggagcc aggcagcata ggcagcgact tccaccacaa agaggccaaa
     1201 atcctgcacc gagtcgaagc ctcgcggcag cacgatgagg gcgctgatcg cgagagcgcc
     1261 ataggagaac gccgaagggt tctcgagaag gcgccgtaac gcctgctcca gaatgcgcgc
     1321 ggcggtgctc gactcccgct gttcgtgcac agcaatcatc tgacctctcc ccagtcgtcc
     1381 ctgacagatg ctatcaccga accaacttat ctcgcgcacg gtcttctgtc gccagcctcc
     1441 agacggacgc tgacatccac cgatcgactg atggctaagg gatcggccgc tggatggcag
     1501 ggccggacct tccctgaaat attgtcgccg cgttcaggga gttcgccagt caccgaaagg
     1561 aggttcgttg cgaccggaag tcgcgaccgg cagatcgatc cgcacaccgc ccgcaggact
     1621 gagcagccgg tggccgtgcc gccatcggct gcttccccac tatccccctg attcgagcac
     1681 aggtctgtca tcgttgtggc gagaaatcca gtggatatgc cgacccaccg atcgatggat
     1741 gcgctcagcg ccttgtgctg gatacccgca cactgcactc gacgccatac tgtgccccct
     1801 tgatgtctgg ccaaacactt tccgaggagg gcagatgaga cagcgggcga tcgcgacact
     1861 gatgggaacg gcaatggcgg ctctgttgag caccagcctg atggcgcagg acgtgagcta
     1921 cgactacgac cgtagcgtcg acttcaccaa gctcaagacc tacgcctggg ttcctgggac
     1981 caatctgagc gatgagctga accacaagcg catcgtcgac gcgatcgacg ctcagatggc
     2041 aatgaaaggc ctggtgaagg tggactccgg cacgaacgcg gacgtgttga tcgcctatca
     2101 gacggcattc gacaagaatc tggagatcaa cgggttctct accggatggg ccggttatcg
     2161 cttcggccgg accgggtcgg ctcgagtgga ggaggtcgtt gtcggccgac ttgcggttgt
     2221 catgatcgac gcgaagaccc atgccctcct ctggcgcggg atcgccaccc gggatgtgga
     2281 cgccaacgcc agtccggaga agcgggacaa gaacatcaac aaggcggctg aaaagctgtt
     2341 caagaagtat ccgcctactt cccatccacc aatcgactga tgccggctgc tccgagcgct
     2401 tgataccgcg atctcggccc gagcgcgata ctgtgcccgc actcaaaggg agcgatcaaa
     2461 tggttgcgac gttcaacggc tgggacgata tgccggaagc cgagcgggaa agcctggagc
     2521 aatgggaacg ggagcatgag ggacagtcgt ccgcctgggc gctgccgacc cgattctcga
     2581 tgctgttccc ggtcgcgctg tccctaccgg tcatcgcgca gtgagactcg agatggagga
     2641 tcgcacgatg cagcgagcaa cctggctgtt ggcagtgctg gcaatggcgt gcagcggcaa
     2701 gcggccggcg caggtcgtcg ccgagggaac catcgaggtc gcggaaaccg acgtggtgcc
     2761 gcgaatcgat gggcggatca gccggatctg ggtcgccgaa ggcgatcgag tgcgcgccgg
     2821 tgataccgtg gccaccctag tgtcgtccac catgccggag gatctccgcg agcgggaagc
     2881 ccgcgtggcg caggcggagg cggagttgcg cgacctcgag cgcggctccc gtccggaaga
     2941 gatcgcccgg gccgaagccg agcttcgaac cgcccaggcc gaagatctcc gcgctgcccg
     3001 cgacctcgag cgcatggagt cgctgggggc cgccaacgcg gtgagccagc aggaggtgga
     3061 ccaggcgcgc gcggcggcag gtgaagcgcg cggccggaga caagcaagcg aacactcact
     3121 cgaactgctg agagaaggcc ccacgcgcga agcccgcgag gccgccaggt caaggttggc
     3181 ggaggcccgc gccttcctgg cacagggcaa ggccagcaac ggtgagctga tcctgcttgc
     3241 tccggcggat ggcgtcatca tgccctacta ctatcgcgtg ggtgaagcgg tcgaatcggg
     3301 cgatccggtg ttgaccattg cggacgtgac tcgtccctgg atccgagtgt acgtcaatca
     3361 gcgggacctc cccggccttc gcattggagc caccgcggaa gccgttctcg acggggatac
     3421 ccggcaggca atccccggcc ggatcgtcgc gatcaatcac aaggcggaat acaccccgag
     3481 ggttgcactc accactgacg agcgggccga cctgatgttc ggagtgaaag ttgcgctttc
     3541 gaatccctcc ggtacggccc aggccggtct gccggccacg gtacggctgg cccggcatac
     3601 ggccgagacc agcacgcaga ttgccgaggc ccgcccatga cctcgagcgt ggcggttgag
     3661 accctcggca tgcgcaaggt gtttggtcat ctggtggcgg tggattcgct cgatctcacc
     3721 gtggcgcggg gaaccgtctt cgggttgttg gggtccaacg gctgcggcaa gaccacgacc
     3781 atccggatgc tttgcggatt gctgatcccc accagcggca gcgccacagt ggttggtctg
     3841 gatgtggcca ctcagggtga ggcaatccgt cggcgcatcg gctatatgtg ccagaagttc
     3901 ggcctgtacg acgacctcac cgtacgggag aatctccgct tctactcctc gatctacggg
     3961 ctgcggcggg agcagctggc cgcccgaatg gaagagcagc tcaccgatct ccggctcacc
     4021 aagcgggtcg atcagctggt cggcacgttg agcggcggct ggaagcagcg ggtggcattg
     4081 gcctgcgcga ccgcccatcg gccggagctg gtgtttcttg acgagccaac cgccggggtc
     4141 gatcccgcgg cccgccggct cttctgggaa atcatatacg agttggccaa taccggcacc
     4201 accattgtgg taaccacgca ctacatggat gaggcggccc ggtgccagcg gcttggcttc
     4261 atgtcgaaag gcaagctcat cgctcacggc actcaggacg agattctcca ccacttcggc
     4321 cagcccacgg tggaagacgt cttcgtcgag ctgcagcgga aggacgaggg ggtggcggca
     4381 tgagactgct caagcggatg cgcgactcgt cgctatggcc gatgctgtgg aaggagttcc
     4441 gccagatgcg ccgggatcgg tttaccgtcg ccatgctggt gggcctgcca tcggtgcagc
     4501 tgctgctgtt cggctacgcc atccggaccg aggtgcgcca tgtgcccatg ctggtcctgg
     4561 accagtcgca aacccaggaa agccgagccc tcaccacgct gctcaccaac acccagaact
     4621 tcgacgtggc agggatggcc cgcggccaga gcgaagtcga tcgccggatc gccagcggaa
     4681 atgtgcgggc ggcgctcatc attccgcccg atttcagccg ggacctcaag cggggtcgcg
     4741 gcgccaccgc gcaggtcatc gtcgatgccg tggatcccct ctcggcgtcg gcggcgatat
     4801 cggcagcggg cctagccagt caaaccgacc ttctggcgct cacccgcgga gagcctgttc
     4861 cccagccgcc gctcgaggtg cgggtgcgtc cccgctacaa ccccggtctg gtgagcgcgt
     4921 tcaacatcgt ccctggactg atcggcgtcc tgctcaccat gactctggtg gcgatcaccg
     4981 ccatggcgct ggtgcgggag cgggagcgcg gcacgctgga g
//
LOCUS       DASRPQ010000081         1035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1262096, whole genome shotgun sequence.
ACCESSION   DASRPQ010000081 DASRPQ010000000
VERSION     DASRPQ010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1262096"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..330
                     /locus_tag="VFD73_00940"
     CDS             <1..330
                     /locus_tag="VFD73_00940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72595.1"
                     /translation="LRFASFIYAGGLGMIYLTRLGSLAAYPLALLLLGAGRTPLAIIE
                     VMAAVGLVRASTALVLPVRGLDRMSSDAVPTWLQKHSKGMQRAEVLVLVGLILLPIGM
                     LLNRYFV"
BASE COUNT          185 a          329 c          304 g          217 t
ORIGIN      
        1 ctgaggtttg cgagcttcat ctatgctggt gggcttggaa tgatctacct cacccggctg
       61 ggatcgctgg cagcttaccc gctcgcgctt ctgctgcttg gcgcgggccg aactccgctc
      121 gccatcatcg aggtgatggc cgcagtgggc ctggtacgtg cctccaccgc ccttgtgctg
      181 cctgtgaggg gactggaccg catgagtagt gacgccgtgc caacgtggct gcaaaaacac
      241 tccaaaggga tgcagcgtgc cgaggtcctg gtactcgttg gcctcatctt gctccctatc
      301 gggatgctat tgaatcgtta tttcgtatga ctcgacggag gtggcaatga ccacggctca
      361 aggagctggc cgaaagacct tggcgcggcg tgcggtcttg ctcagctcgg gcttgtcgcc
      421 gacagccgga atgatctctg gcatgaggcg cgccgcggcc gcgacggaat gggcaaatta
      481 tgccagccca gactccggag catcgatcag atacccggca tcgtgggctg tcgacgcccg
      541 cgctaacgtc aatctacttt atccgcatca gagcctcgcc gtacggagcg cggcagcgcc
      601 cagcaggtca gccgaagatt tccccgacct gtcgtcgtat tccaccagag gcgtttacct
      661 gtggctgctc cattacgacg gtctgcacca agactgcccg cccttccatg ccctcacatc
      721 ccatacccag ctgaaggaac aggtatccga attcggtacc ttcagccgat acggggccct
      781 tttctcaggc tcgcagcggt cgttcatcgt ccggctctgg atcgggcgcg ccgtatcaca
      841 ggactcaacc tctctgctgg acaaatgcct gtcctcgctc agcctgccgt agcaaggaac
      901 accgattcgt aacacgctgt cagggcttag cctcgatccg ccgtgtaagt aggtgttctc
      961 gggggcctgt cgacccgaag gtgcccgctg agcagatgcg aatgcgacaa gcggttcgaa
     1021 tccgctcacc ggctc
//
LOCUS       DASRPQ010000082         8662 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4396394, whole genome shotgun sequence.
ACCESSION   DASRPQ010000082 DASRPQ010000000
VERSION     DASRPQ010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8662
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4396394"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..560
                     /locus_tag="VFD73_00945"
     CDS             <1..560
                     /locus_tag="VFD73_00945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72596.1"
                     /translation="AVVADTVLNAPDKESTDSALKERPIFHTDAGRVVRGGGGIVPDL
                     VVRPDTLTDPEREFAKALGNGFPQYKDALTSIALDAKKNHGVRTEAFKVTPQMREEVY
                     TRLRDHNVDVSQSVFNGAGALIDEQLGYEIARYVFGRPAEFRRRAANDAQMQTAMTLL
                     RKAQTPKELLSLSRTSVPATTAQNQ"
     gene            647..1501
                     /locus_tag="VFD73_00950"
     CDS             647..1501
                     /locus_tag="VFD73_00950"
                     /inference="COORDINATES: protein motif:HMM:NF022188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rossmann-like and DUF2520 domain-containing
                     protein"
                     /protein_id="HZI72597.1"
                     /translation="MSQPRITIIGAGRMGQGLGLALKRRGYRVLLVNRTPRDVMAPLI
                     LHQGSWAEATLGAELILIATPDDAIEQVATDLAAEGAVSRDQVVLHLSGLLDRGALSA
                     LDGTGAACGSFHPVQTIAAPGTAAERLKGAYVGIEGDERALVAAERLANTLRMVPVRI
                     PAAAKPAYHAGAALVANYSIALVGVAERLARSAGIPADVAARVYLPLWAGAVSNVTEA
                     GTASALTGPLRRGDVQTIRAHLAALGPEDRQLYRAVGRAALALAREAGLDGAAAARLQ
                     TVLEEPTD"
     gene            complement(1510..2157)
                     /locus_tag="VFD73_00955"
     CDS             complement(1510..2157)
                     /locus_tag="VFD73_00955"
                     /inference="COORDINATES: protein motif:HMM:NF015510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HZI72598.1"
                     /translation="MRALWLVVVTLLTAQPVHAQDAQAIIGRSARVYRSLRNLTADFV
                     QVINNPMIDSAESKGTLVQSGPAKLAMRFTDPPGEAIVIDGEHVWVYTPSTVPGQVIR
                     MSVPNGGPVYGYNLLAWFLDRPSERYKPSYVRTEQRGGHPVDVIQLVPTVPDMPFSKA
                     VIWLDRDDGLPRRLEIQEESGAQRTLDLSHIRLNQALPDDTFRFKVPKGDRIVDQ"
     gene            complement(2154..3194)
                     /gene="aroF"
                     /locus_tag="VFD73_00960"
     CDS             complement(2154..3194)
                     /gene="aroF"
                     /locus_tag="VFD73_00960"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HZI72599.1"
                     /translation="MLIVMRHGAPEEDIQRVARTIEEMGYQARPMPGKQRTTVGLVGN
                     DGRVDGSRLAALPGVQEVIHVTKPYKQVSREWKPESTVIRLPGGLSIGGDEVVVMAGP
                     CSVESEGQILESAKAVREAGATVLRAGAFKPRSSPYSFQGLGMAGLKLLARAREETGL
                     LIVTEAMDGEAIDAVADTADIIQIGARNMQNYSLLKRAGRLGKPVLLKRGLSATIQEL
                     LLSAEYILAEGNPNVILCERGVRGFDPATRNLLDLSAIPVVHGVSHLPIIADPSHGTG
                     HRDMVMPMAKAAVAAGADGLLIEVHPTPDRALSDGAQSLYPEQFERLMREIRLIAEAI
                     GRRVAEPAGVRA"
     gene            complement(3348..6818)
                     /gene="smc"
                     /locus_tag="VFD73_00965"
     CDS             complement(3348..6818)
                     /gene="smc"
                     /locus_tag="VFD73_00965"
                     /inference="COORDINATES: protein motif:HMM:TIGR02168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HZI72600.1"
                     /translation="MKLTKLELSGFKSFADTVTLTFDQGVTAIVGPNGCGKSNVSDSV
                     RWVLGEQSARLLRGGKMEDVIFQGSAARRPVNVTEVSLFLDNSDGDLPIAYREVVVTR
                     RLSRSGQSDYLLNGSPVRLRDIQDLLRGTGLGSDAGVVIEAKMIDLLLSDRAEERRSL
                     FEEAAGIGLYRDRKHSTERRLEETAVDLQRVEDLIAEVQSQIRSLARQRGKAERHAKL
                     SEEKFSVQLTLARRHLEQLSSEVEGMEARYAELSELRPLARQRVEESGARREHWARAR
                     MAAEARRTELSQRLATLRMEIGKLDGDLALAGERLAHASSRRLRATEERTQMEFRAQQ
                     AALEQSTAAEDHDAAASEHTRIGRELAGRAEAEESVRRRLAEQRATVRRLEQDLQGYA
                     QSLRSLEGERAALEGELAALRERAGHAETHRSRLSLELAEAQEHHSRTAESAEQLSRE
                     AKRASAAADHARHLVAETREREAMHRSDRRQAEESLAQLTARRQALEELERDRVGLAP
                     AAASLLAVREQFDDAVLGPLSDFVSTGRENAELAERLLGEWMHAVLVRDTASVQAIQT
                     WHAEVQPGALVLLPVDPGPSAVVADAGFADQLKAEGPALGWVRAALAGSEVLDDSGRV
                     LRRASGAIFLSGQGAPFGPIRRRAELVTLLQESENGETALRTAEQALDATLERLKELE
                     QTLAQAVTELERAREAERVAAAARDDSARITTNLGRELVESETQLARINERVGVSEQR
                     LAEIDRSLTEGELTRSRGEAELGAARIVLADLEGEQEAAREQRAHWQVQEAHVAGSLR
                     AAAERLERGARSRTEAEEVARALSLELEQLESNAALLTAQQGEWLEALAEKRAALQEL
                     ESASSAAEAELTSADGALAEAERELAASRADLESAGDESHRLEVRLTEVAGLRRSIVE
                     RVEAEWHRPFDQLMETAELLDLDLDTLESEALRIHGALESIGPVNPLAVEEHAEESKR
                     LEFLTSQRDDLVSARHSLMQAIREIDGTARTMFVETFTAIQANFSKVFQTLFGGGECE
                     LRLTTPDDPLESEIDIHAAPRGKRTQRIHLLSSGERTLVAVSLLFSIYLTKPSPFCLM
                     DEVDAPLDDANVGRFTRLLEEFKTDTQFLVITHNPRTMQSADAVYGVTMQEPGISSIV
                     GVRLGEGEHV"
     gene            complement(6846..8240)
                     /locus_tag="VFD73_00970"
     CDS             complement(6846..8240)
                     /locus_tag="VFD73_00970"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HZI72601.1"
                     /translation="MKSPAILLGSLAVLISSACKGSPELATGSFSATSRNVPSVTVLR
                     IPKEGGLPRLYRIPGLDSAAWKLSDRLPPLERTIGADPEQGLVYALDRKNNVVGVDLD
                     TRRVRTFLENIRYAALGPDGALYAVDTGSTVTQLVRRTPVRFRSKLQGKPLEMQGTMD
                     GALLAQLAGSKPALEFLGSDQSPTSTVLPEGQVAATFLGDLVAVAADTAVVLYTPQNK
                     SKPKVIHVEGDARAVLFSPSGHRLYVARAAAPLLVLDRYDGVKLREIELPGPARGLRS
                     DLFGSWLLVRPETADSVWVIDIGTGKYAGATAARWSDDLPAVAAPRTLLVRRGNDVVA
                     LDLGAPGFKEVGRVPGGAADIWLPMAWHPASDNEIPVVADSSASAAADTSGNRPTVYL
                     QVSSSQNPTWASELSEKLRAAGLPASVLTPRRADEAYRVVLGPYATREQAEETGGKLG
                     MPSFIVTAQDQSAR"
     gene            complement(8322..>8662)
                     /locus_tag="VFD73_00975"
     CDS             complement(8322..>8662)
                     /locus_tag="VFD73_00975"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HZI72602.1"
                     /translation="LDRLVGTQIGVASGEIRFPILTPALGFVPQGFPPLEGAIFYDLG
                     LTWDETSTIRWSRQPGDDPVRVRTPLQTWGASLRLNLFGFAIARVDYSIPQERKAVKG
                     LWTLSLGPTF"
BASE COUNT         1481 a         2836 c         2797 g         1548 t
ORIGIN      
        1 tggcggttgt ggccgatact gtcttgaatg cgccggacaa ggagtccacc gactcggcgc
       61 tgaaagagcg gccgatcttc cataccgatg cgggccgggt ggtccgcggt ggtggcggta
      121 tcgtccccga cctggtggta cgacccgaca cactcaccga ccccgagcgc gagttcgcca
      181 aggcgctggg gaacggtttc ccccagtata aggacgcctt gacctccatc gcgctcgacg
      241 caaagaagaa tcacggggtg cgcaccgagg cgttcaaggt gacaccacag atgcgcgaag
      301 aggtgtatac ccggctgcgt gaccacaacg tcgacgtgag tcagagtgtg ttcaacggag
      361 ccggcgctct gatcgacgaa cagctgggat acgagatcgc ccggtatgtc ttcggccgtc
      421 ctgcggagtt ccggcgtcgt gccgcgaacg acgcgcaaat gcagaccgca atgactttgc
      481 tgcgcaaggc tcagacaccc aaggagctgt tgagcctctc ccggacgagt gttccggcaa
      541 caaccgcgca gaatcagtag gcagatacag gaactcttgt tgaaggaagc ccggtcggcc
      601 ataagggtcg gccgggtttt catttggggc tacgaccggg agtggcatgt ctcaacccag
      661 aatcacgatc ataggcgcag gacgaatggg tcaggggctc gggttggcgc tgaaacgccg
      721 cggctaccgg gttctgctgg tgaaccgcac gccgcgagac gtaatggcgc cgctgattct
      781 gcaccaaggc agctgggcgg aagcaacctt gggtgcggag ctcattctca tagcgacccc
      841 cgacgatgcg atcgaacagg tggccactga cctggccgcc gaaggcgctg taagccgcga
      901 ccaggtggtg ctccacttgt cgggactgct ggatcgcggc gcgctgtcgg ccttggacgg
      961 aacgggagcc gcctgtggct cattccaccc cgtccaaacc atcgccgcgc cgggcacagc
     1021 ggcggagcgg cttaaaggcg cctatgtggg aatcgagggc gacgaacggg ctctggtggc
     1081 ggcggagcgg ctggcgaaca cgcttcggat ggtaccggta cggattcctg cagcggccaa
     1141 gccggcgtat cacgcgggcg ccgcgttggt agcgaactac agcattgcgc tggttggggt
     1201 agcagagcgg ctcgcgcggt cggccgggat tcctgccgat gtggcagcgc gggtctatct
     1261 cccgctctgg gcaggcgccg tgtcgaatgt cactgaggcg ggaactgcat cggcgctcac
     1321 cggaccgctt cgccggggag acgtgcagac catccgtgcc cacctcgcag cactagggcc
     1381 ggaagaccgc cagctctatc gtgcagttgg gcgagcggcg ctggcgctgg cccgcgaggc
     1441 aggactcgat ggggcggcgg cagcccgact gcagacggta ctcgaggagc cgacggactg
     1501 agcgaggcac tactgatcga cgatccgatc gcctttgggc accttgaacc gaaaagtatc
     1561 gtcgggcagc gcttggttca gccgaatgtg agagaggtcg agagtacgct gggcaccgga
     1621 ctcttcctgg atttccagcc gccgtggaag cccgtcgtct cgatcgagcc agatcaccgc
     1681 cttgctgaat ggcatgtcag gcaccgtcgg caccagctgg atgacatcca ccgggtgacc
     1741 accgcgctgc tccgtccgga cgtaggaagg tttgtatcgc tccgagggac gatcaagaaa
     1801 ccaggcgaga agattgtagc cgtacaccgg tcctccgttc ggtaccgaca tccggatgac
     1861 ctgtcccgga accgtgctcg gggtatacac ccagacgtgc tccccgtcga tcacgattgc
     1921 ttcgccggga ggatcggtga accgcatcgc gagctttgcc ggcccggact ggaccagtgt
     1981 acccttgctc tcggcgctat cgatcattgg attattgatc acctggacga aatcagcagt
     2041 caggttccgg agggagcggt agacccgcgc cgatcgcccg atgatggcct gagcgtcttg
     2101 ggcgtggact ggctgagctg tcagcagggt gacgacaacc agccaaagcg ctctcacgcc
     2161 cggacccctg ccggctccgc cacccgccgc ccgatggcct cggcgatcag ccggatttcc
     2221 cgcatgagac gctcgaactg ctcgggatag aggctttggg cgccatccga gagcgcgcgg
     2281 tccggggtcg gatgcacctc gatgaggagc ccatcggccc cggcggcgac agccgccttt
     2341 gccattggca tgaccatgtc ccggtggccg gttccgtgac tcggatcggc gatgataggc
     2401 aggtgcgaaa ctccatggac caccgggatg gcgctgagat cgaggagatt ccgggttgcc
     2461 ggatcgaagc cgcgcactcc tcgctcgcaa aggatcacat tggggttacc ctcagcgaga
     2521 atgtattcgg ctgaaagcag cagctcctga atggtggcgg acagcccccg cttgagcagg
     2581 accggcttgc cgagccggcc ggcgcgtttg agcagagagt agttctgcat gttccgggcg
     2641 ccgatctgga tgatatcggc tgtgtcggcg acagcatcga tcgcttcacc atccattgcc
     2701 tcagtcacaa tcagcagacc ggtctcttct cgggcccgcg ccagaagctt gagaccagcc
     2761 atgccgagtc cctggaaaga gtacggcgag ctccgcggct tgaacgcacc agcccggagc
     2821 acggtcgctc cggcctctcg caccgccttg gccgattcca gaatctgtcc ctcgctttcg
     2881 acggagcacg gtccagccat gacgacgacc tcgtcgccac ctatgctgag tccaccgggc
     2941 agacggatga cagtggactc tggcttccac tcccgtgaga cctgcttgta cggcttggtg
     3001 acgtggatga cttcctgaac tccagggagg gccgccagcc tggacccatc cacccgccca
     3061 tcatttccga ccaggccgac ggtcgtgcgc tgtttgcccg gcatgggcct ggcctggtat
     3121 cccatctcct cgatggtccg ggccactcgc tggatgtcct cttccggcgc gccatggcgc
     3181 atgacgatca acatctaggc tccttccccc agaacctttg gctcctcacc ccgagcgcaa
     3241 cgagggacct actccgcggg tacggacccc gtcaggtagg tccctcaata cgatgaggag
     3301 tttgcgggcc cgcagccgct ctcgcaagct ctgggccaac tcagccgcta gacgtgctcc
     3361 ccttcgccca aacggacgcc aacgatcgaa gagattcccg gctcctgcat cgtcacccca
     3421 tacacggcat cggcagactg catcgtcctc ggattgtggg tgatgaccag gaactgggtg
     3481 tcagtcttga attcctcgag caaccgggtg aaccggccga cattggcgtc gtccagcggg
     3541 gcatcgacct cgtccatcag gcagaacgga ctcggcttgg tgagatagat gctgaatagc
     3601 agggacacgg ccaccagggt tcgctcgccc gaggagagca gatggatccg ttgggtccgc
     3661 ttccctcgag gagcggcgtg gatgtcgatc tcgctttcca gtgggtcatc cggagtagtg
     3721 agacgcagct cgcattcgcc tccaccgaaa agcgtctgga ataccttgga aaagttggcc
     3781 tgaatagcgg tgaacgtctc tacgaacatg gtgcgggcgg tgccgtcgat ctcccgtatc
     3841 gcctgcatca gggagtgacg ggcgctcacc aggtcatctc gctgtgaggt caggaactcc
     3901 agccgtttac tctcctcggc gtgctcctcg acggcgagag gattcaccgg accgattgac
     3961 tccaacgcgc cgtggatccg gagcgcttcc gactccagcg tgtccagatc gagatccagc
     4021 agctccgccg tctccatgag ctgatcgaag ggacggtgcc actcggcttc gacccgctcg
     4081 acgatgctgc gccgcagtcc ggcgacctcg gtgagacgaa cctcgaggcg gtgactctca
     4141 tcgccggcag attccagatc agctcgagac gccgcgagtt cccgctccgc ttcggcgaga
     4201 gccccgtcgg cgctggtcag ctcggcttcg gccgcactgc tggccgattc cagctcctgc
     4261 agggctgccc gtttctcggc cagtgcctcg agccattctc cctgttgggc tgtcagcagg
     4321 gcggcattgc tttccagctg ctccagctcc aaagacaggg cgcgggctac ctcttccgcc
     4381 tcggtgcgac tgcgagctcc tcgctcgagc cgttccgccg cggcccgaag gctccctgcg
     4441 acgtgagcct cctgcacctg ccaatgggcc cgttgctctc gagccgcttc ctgctcgccc
     4501 tccagatcgg ccagcactat tcgtgcggcg ccgagctctg cctctccccg gctgcgggtc
     4561 aactcgccct cggtgagtga tcggtcgatt tccgccagcc gctgttccga aactcccact
     4621 cgttcgttga tgcgcgcgag ctgcgtctcg gattcaacga gctctcgccc gagattggtt
     4681 gtgatgcggg ccgagtcatc ccgtgccgcc gcagccaccc tctccgcctc ccgagcccgt
     4741 tccagttcgg tcactgcttg cgccagcgtc tgctccagct ctttcaagcg ctcgagggta
     4801 gcatcgagcg cctgctcggc tgtacggaga gcggtctcgc cattttccga ctcctggagc
     4861 agtgtgacga gctccgcccg acgccgaatc ggcccgaatg gtgcgccctg gccggaaagg
     4921 aagatcgccc cgctcgcacg gcgcaggacc cggccgctgt cgtccaggac ctcggaacca
     4981 gccaacgccg cgcggaccca gcccaaagcg gggccctcgg ccttcagttg atcggcgaat
     5041 ccggcgtccg ccacaaccgc gctgggtccc gggtcgaccg gcagaagcac caaggcacca
     5101 ggctggacct cggcgtgcca ggtctggatt gcttgtaccg acgcggtatc gcgcaccagc
     5161 actgcgtgca tccactctcc caggagccgc tcagccaact ctgcgttctc ccgcccggtg
     5221 ctgacgaagt cactcagcgg accgagcacc gcgtcatcga actgttcccg gacagcgagc
     5281 aacgatgcag cggctggcgc caggccgacg cggtcccgct ccagctcctc caaggcttgt
     5341 ctgcgcgcgg tgagttgggc cagagactct tccgcctgtc ggcggtcaga ccgatgcatt
     5401 gcttcgcgct ctcgggtctc ggccacgaga tgccgcgcat gatcggctgc cgcgctggcc
     5461 cgcttggcct cacggctgag ttgttcggcg ctctccgcag ttcggctgtg gtgctcctga
     5521 gcttcggcga gttccaggct gaggcgggac cggtgcgtct ctgcgtggcc ggcgcgctct
     5581 cgcaatgcgg ccaactcacc ttccagcgcc gcgcgctccc cttcgagaga cctgagactc
     5641 tgggcatacc cctggagatc ctgctccagc cggcgtactg tcgctcgctg ctcggcgaga
     5701 cgccggcgca ccgattcctc ggcttcggcc ctaccggcca gctcccggcc aatacgggtg
     5761 tgttccgagg ctgccgcatc gtggtcctcg gccgcggtgc tttgctcgag cgcggcctgc
     5821 tgggcacgga actccatttg ggtgcgctct tcggtagctc tcaggcgacg cgatgaggca
     5881 tgcgccagtc gctcgccggc gagcgcgagg tcgccgtcca gtttgccgat ctccatgcgc
     5941 agggtcgcca aacgctggct cagttcggtg cgccgggcct cagccgccat tcgtgccctg
     6001 gcccagtgtt cgcgccgggc accgctctct tccacacgct ggcgggcaag cgggcgcaac
     6061 tcgctcagct cggcgtagcg cgcctccatg ccttcgacct cactggacag ctgttcgagg
     6121 tgccgccggg caagcgtgag ctgtacgctg aatttctctt cggagagttt ggcgtggcgc
     6181 tcagctttgc cacgctggcg ggccaggctt ctgatctgcg actgaacttc tgcgatgaga
     6241 tcttccactc gctggagatc caccgcggtt tcctccagcc gccgttcggt gctgtgcttg
     6301 cggtcgcggt agaggccgat accggcggct tcctcgaaca acgatcgccg ctcttccgcc
     6361 cggtcggaca ggaggaggtc tatcatcttg gcctcgatca cgacgccggc gtcgctgccg
     6421 agcccggtgc ctcgcagcag atcctgaatg tctcgcagcc gcactggcga cccgttcagc
     6481 aggtagtcgc tctgccccga tcgcgacaac cgacgggtga ccaccacctc gcggtaagcg
     6541 atcggcagat cgccgtcgct attgtccaga aaaagggaga cctcggtgac gttaaccggc
     6601 cggcgagcgg cggaaccctg gaagatcacg tcctccatct tgccgccgcg gagcagccgg
     6661 gcggactgct cacccagcac ccagcgaacc gagtcggaga cgttggactt gccgcagcca
     6721 ttgggtccaa cgatggcggt gacgccttgg tcgaaggtca gggtcaccgt atccgcaaat
     6781 gacttgaagc cggacagctc cagcttggta agcttcatgc gatctacccc ccacgaaggg
     6841 tgacgctatc gagccgactg atcctgagct gtgactatga atgaaggcat gccgagcttc
     6901 ccgcccgtct cctcggcctg ctcccgagtc gcgtacgggc caagcacgac gcgatacgct
     6961 tcgtccgctc ggcggggggt cagtaccgag gccgggaggc ctgcggccct gagcttttcc
     7021 gagagctcgc tggcccaggt tggattctgt gagctgctta cctgcaggta cactgtcgga
     7081 cggttgccgc tggtgtccgc cgcggcgctc gcactggagt cagccacgac agggatctcg
     7141 ttgtcgctgg cagggtgcca cgccataggc agccagatgt ccgcggcgcc cccaggtacc
     7201 cgtccaacct ctttgaaccc aggcgcgccg aggtcgagtg ccaccacgtc gtttcctcta
     7261 cgaaccagga gggtacgcgg cgcggcaacg gcaggaagat cgtcggacca ccgggcagcg
     7321 gtggctccag cgtacttgcc ggtcccgata tcgatcaccc agaccgagtc agctgtctct
     7381 ggccggacca gtagccagct cccgaagaga tcgcttcgaa gtccgcgagc cggtcccggc
     7441 agctcgatct cgcgcagttt gacgccgtca taccgatcga gcaccaggag cggtgccgcg
     7501 gcgcgggcaa cgtacagcct gtggcctgag ggcgagaaga gaacggcacg ggcatcaccc
     7561 tcgacgtgga tcaccttggg cttggacttg ttctgcgggg tgtatagaac aacggcggtg
     7621 tctgcggcga cggctaccag atcgcctaga aatgtggcgg cgacctgtcc ttcggggaga
     7681 accgtcgaag tgggagactg gtctgatccc aaaaactcga gcgcgggctt gctgcccgcc
     7741 agctgggcca gcagcgcgcc atccatggtg ccctgcattt ccagcggctt gccctgaagc
     7801 ttggagcgga accgcacagg ggtgcggcgg accagttggg tgacggtgct gccggtgtcg
     7861 accgcataca gggcgccatc tggaccgagt gcagcatacc gaatgttttc caggaacgtt
     7921 ctcactcggc gggtgtccag atccacgccg acgacgttgt tcttgcggtc gagggcatag
     7981 accagaccct gttccgggtc ggccccaatg gtgcgctcga gtggagggag gcgatcggac
     8041 agcttccacg cagccgagtc gaggcctgga atccggtaga ggcggggcag gccgccttcc
     8101 ttcggtatcc gaaggacggt gacgctcggg acgttgcgcg aagtagccga gaagctgccg
     8161 gtcgcgagct cgggggagcc cttgcacgcc gagctgatca gcacggccag ggatcccaac
     8221 agtatggcag gggatttcac ggacggaaaa tagcggggag gcagggagcc agggaagcgg
     8281 ggaaggggga agaggatccc gacttccccg ctgccccgct gttagaacgt cgggcccagg
     8341 ctcagcgtcc agagaccctt cacagccttt cgttcctgcg ggatcgagta gtccacccgt
     8401 gcaatcgcaa aaccgaagag gttcagccgg agcgatgcgc cccaggtctg gagcggagtg
     8461 cgaacccgga ccggatcgtc gcccggctgc cggctccacc tgatggtcga ggtttcgtcc
     8521 caggtgagtc cgagatcgta gaagatggcg ccctcgaggg gcgggaaacc ctgaggcacg
     8581 aagccgagcg cgggcgtaag aatggggaat cgaatttcgc cgctcgccac tccgatttga
     8641 gtgccgacca ggcggtccag ct
//
LOCUS       DASRPQ010000083         3062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1890337, whole genome shotgun sequence.
ACCESSION   DASRPQ010000083 DASRPQ010000000
VERSION     DASRPQ010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3062
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1890337"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..607)
                     /locus_tag="VFD73_00980"
     CDS             complement(<1..607)
                     /locus_tag="VFD73_00980"
                     /inference="COORDINATES: protein motif:HMM:NF013168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HZI72603.1"
                     /translation="MQIIPVLDIAGGIAVHAKAGDRTQYAPLGSDLAPGRVGDALAVL
                     RAFHSTLGIHECYVADLDAIQGGAVQRSLLRELSEFHTGFAGALLVDAGTHSPDGALE
                     VLSCGASQVVVGLETLQAFADLRKIVEVVGPSRSVFSLDLRLGTPILHKAIQDLQGAG
                     PDPVSVAEQAADAGAATLLILDIGRVGTGVGVDLGLIETLRH"
     gene            634..1674
                     /locus_tag="VFD73_00985"
     CDS             634..1674
                     /locus_tag="VFD73_00985"
                     /inference="COORDINATES: protein motif:HMM:TIGR03123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HZI72604.1"
                     /translation="MHDNPAVLGWDIGGVNLKVARFPSGTPLPKVVCRPLEIQHVLPT
                     LATTLADVARELGARPGDQHAVTMTAELSQAFRTKREGVGYVLDALEASFPFGSLHVY
                     TAGAEFVSSGHARQHPLAVAASNWMATACWVSQSFPNCLLIDMGSTSTDLIPIVEGEV
                     TAIGRNDPERLQNGELLYTGLVRTPIEAIVHQVPLWDGDAGVSAEGFALIGDAYVWLG
                     RLRPEDYTWRTPDGRPATREYAGERLARVVCADREMLKESDIDVLASAVAGAQVEMIG
                     ARVRQIRARHPSIGLAVVTGMGAEIATQAAEAAGLKVVSLGSELGIVPQATPAAAVAS
                     LLSAQLLRQARA"
     gene            1671..2267
                     /locus_tag="VFD73_00990"
     CDS             1671..2267
                     /locus_tag="VFD73_00990"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72605.1"
                     /translation="MSAPPAEPICVVKIGGGLSAIPGALNLVCATVGEAARGQRLLIV
                     PGGGPFADGVREFQIRIGVSEEAAHWMALLAMDQYAYALAERIGGCVLLEDPGLIPAA
                     LKEGHPVVLAPSRWMRHADVLPRVWDVTSDSIAAFVAGALDARGLILIKPSAQRAGLD
                     RYFESALPANMAWRVVGADQIDALSAVLNGLIAGDGRE"
     gene            complement(2233..>3062)
                     /locus_tag="VFD73_00995"
     CDS             complement(2233..>3062)
                     /locus_tag="VFD73_00995"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HZI72606.1"
                     /translation="MTTTALQRMTLENDLRRALERNEFEVHYQPIVDAYTNTVVGAEA
                     LLRWRHPELGLLLPSEFIPIAEENGLIVPMGEWILQSACLQNRAWQDAGLPRIRVAVN
                     LSSRQLKKGLTDTIGRALQISGLDSRYLSLELTESVLVNYHREGTEALHALRAMGLHL
                     AVDDFGTGYSSFSYLKHFPLDTLKIDRSFIREIAIQPDDAAITTAIIAMGHALGLRVI
                     AEGVETDAHLTLLQKQGCDEVQGYLLGRPVPPDRFIEHLSRKRSSPVTPVRRQRSIR"
BASE COUNT          563 a          957 c          986 g          556 t
ORIGIN      
        1 gatgccgcag cgtttcgatc agtcccaagt ccacgccgac gccggttcct acccgtccga
       61 tatccaggat cagtagcgtt gctgccccgg catctgcagc ctgctccgcc acactgacgg
      121 ggtctggacc ggcgccctgg aggtcttgaa tggccttatg caggatggga gttcccagac
      181 gcagatcgag gctgaacacg ctgcgggagg gtcctaccac ttcgacaatc ttccgaaggt
      241 ccgcaaacgc ctgcaacgtc tccagtccca ccaccacttg gctggcgccg caggagagca
      301 cctccagcgc gccgtcgggg ctgtgggtgc cggcatccac aagcagcgcg ccggcaaatc
      361 cggtgtgaaa ctcggagagc tcgcggagca ggctccgctg aaccgctccg ccctgaatgg
      421 catcgagatc ggccacatag cattcgtgga tgccgagggt agagtgaaac gctcgaagaa
      481 cagccagggc atcgccgact cggccggggg ccagatccga tcccaagggc gcatactgag
      541 tccggtcacc ggccttggcg tgcaccgcga taccacccgc gatatccaac actggaatga
      601 tctgcatccg taaacgcgct ccgcggagct gccatgcatg acaacccagc ggtgctgggc
      661 tgggacatcg gcggggtaaa cctcaaggtc gcccgatttc cgtccgggac gccgctcccc
      721 aaggtggtct gccggccctt ggagatccag cacgtattgc caaccctggc gactacactg
      781 gctgacgtcg cgcgtgagct cggcgccagg ccaggcgatc agcatgccgt gacgatgacc
      841 gctgagctct cacaagcttt ccggaccaaa cgagaaggtg tcggttacgt tctcgacgcg
      901 ctcgaggcca gcttcccatt cgggagcctc cacgtataca cggctggtgc tgagttcgtc
      961 agctccggtc acgcgcgaca gcatcctctg gccgtggctg cctcgaattg gatggccacc
     1021 gcctgctggg tctcccaaag tttcccaaac tgtcttctga tcgacatggg ctcgacgtcc
     1081 accgacctga ttccgatcgt cgagggagag gtaacagcga tcgggcggaa cgatcctgaa
     1141 cgcctgcaga atggggaact gctctacacc gggctggtgc ggaccccaat tgaggccatc
     1201 gtgcaccagg tcccgctctg ggacggtgac gctggtgtgt ctgccgaagg ctttgccctg
     1261 attggtgacg cgtacgtctg gctcggccga ctccggcctg aagactacac ctggcggacg
     1321 ccggatgggc gtccggccac ccgggagtat gcgggagagc gattggcgcg ggtggtgtgc
     1381 gccgaccgcg agatgctgaa agagtccgac atcgatgtcc tcgcatcagc cgtggccggc
     1441 gcacaggttg aaatgatcgg cgcgagggtc cggcagatcc gagcccggca tccctcgatt
     1501 gggctggcgg tggtcaccgg aatgggtgcc gagattgcaa cccaagcggc ggaagcagcc
     1561 ggcctgaagg tcgtctcact cgggtccgag cttggcatcg ttccccaagc aacgcccgcc
     1621 gcggccgtcg catctctcct ctcagctcag ctcctgcggc aggcgcgagc gtgagcgcac
     1681 caccggctga accaatctgt gtcgtcaaga tcggtggagg actcagcgca attcctgggg
     1741 cgctgaacct ggtctgtgcc acggttggcg aggcggcaag gggacaacgg ctgctcatcg
     1801 taccaggggg tgggccgttc gcagatggag tacgagagtt ccaaatccgc atcggtgtgt
     1861 cggaggaagc cgctcactgg atggcgctgc tcgcgatgga ccagtatgcc tatgcgctgg
     1921 cggagcggat cggggggtgc gttctcctcg aggatcccgg tttgatccct gctgccctga
     1981 aagaggggca tcccgtagtg ctggcaccct cgcggtggat gcgacatgca gatgttctgc
     2041 cgcgcgtttg ggatgtcacc agcgatagca ttgccgcatt cgtggctggt gcgctcgatg
     2101 ccagaggttt gattttgatc aagccctccg ctcagcgggc cggactagat cgttatttcg
     2161 agtcggcgct tccggcaaac atggcttggc gggttgtggg agccgaccag atcgacgcgc
     2221 tcagtgccgt gctcaacgga ttgatcgctg gcgacggacg ggagtaaccg gactgctccg
     2281 ctttcgagag agatgctcga tgaaccggtc gggaggcacc ggccggccca gcaagtaccc
     2341 ctgcacctcg tcgcagccct gcttctgcaa cagcgtgaga tgcgcatcgg tctccacgcc
     2401 ttccgcaatg acccgaagcc ccaacgcatg tcccatggcg atgatggcgg tggtgatggc
     2461 ggcgtcatcc ggctggatgg cgatctcccg gataaaggag cgatcgatct tgagcgtatc
     2521 gagggggaag tgcttcaggt agctgaacga cgaatagccg gtgccgaaat catccacggc
     2581 gagatgaagc cccatggccc gaagcgcatg cagcgcttct gtgccctcac gatgataatt
     2641 gaccagcaca ctctcggtga gctcgaggct gaggtagcga gagtccagcc cactgatctg
     2701 gagtgcccgg ccgatggtat cggtgaggcc tttcttcagc tgacgactgg agagattcac
     2761 cgccacgcga atgcggggca gacccgcgtc ctgccacgcc cggttctgca agcacgcact
     2821 ctgcaggatc cactcgccca tcgggacaat gaggccgttt tcctccgcaa tcgggatgaa
     2881 ctccgacgga agcagcaatc ccagctcggg gtgccgccag cgcaacaacg cctccgcacc
     2941 cacgacggtg ttggtgtagg catcgacgat cggctgatag tggacctcga actcgttccg
     3001 ttccagggca cggcgtaggt cgttctccag cgtcatccgc tggagcgcag tcgtggtcat
     3061 cg
//
LOCUS       DASRPQ010000084         1126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_8399, whole genome shotgun sequence.
ACCESSION   DASRPQ010000084 DASRPQ010000000
VERSION     DASRPQ010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8399"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            689..>1126
                     /locus_tag="VFD73_01000"
     CDS             689..>1126
                     /locus_tag="VFD73_01000"
                     /inference="COORDINATES: protein motif:HMM:NF013104.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72607.1"
                     /translation="MTAATLVGLMSIPALAVLYGGLVQKKWAINTVMMVFTTFCLVLI
                     TWVLWGFKLGFGTPLVSTFLGDPRTVLGHDALQGQASIPLLNGLMPNFRFPQSSLVYF
                     QFVFAAITPILFIGSVIGRISFKVWLVFVPLWITFVYCVNAFLL"
BASE COUNT          179 a          380 c          343 g          224 t
ORIGIN      
        1 ggcccgggcc acgtcgtaga tcgtcggcgc ggcgatcgag ccaccttcgt catcaaagcc
       61 tggggcgttc cccccgggaa tgcccacgtg cgccggggcg cctccgggaa cgcccgccgg
      121 gttcctgcgt atcccgtcca cggccgctcc tcacggtttt ccatcgcccg ggccggtgcg
      181 gtaagcgctt acccgaactg cccgagtaat ggtgccgctc gtcacggcac ccagtccgat
      241 cctggcaccg ccccaggccg accccggtcc ggcccggagc ggagctctgc ggtaagcgct
      301 taccaacccc gtatgccagc agactacgac tatcgagcaa gttatctcaa gggtgagtat
      361 cgccactgtt acgtgaacgt gacatgagcc ggatcgcctg tactgccggg gattccgcgc
      421 cgtcggcttg tcgcgcggct ccctggatgg ggctgacctg gcgatcgccc gcgacatctc
      481 caggtaacgt cctccgcgct cgttacctgc tgtgtaacaa ccgggaaata ctgccgaaac
      541 tcgcgtatgg gacacattcc ttgcaggaat acggagtggc cgaggcggag ccagccagca
      601 cgttggaacc tcgaaggcct gattgcccca tggaggcata gtgattccat accccagctg
      661 gcttaacgcc ggagacaact cctggcagat gaccgctgcc acgctggtcg ggctgatgtc
      721 gatcccggcc ctggccgtcc tgtacggcgg cctcgtccag aagaagtggg cgatcaacac
      781 cgtcatgatg gtgttcacca ccttctgcct cgtcctgatc acctgggtgc tgtggggctt
      841 caagctgggc ttcggcacgc cgctcgtcag cacgttcctc ggtgacccgc ggacggtgct
      901 ggggcacgat gccttgcagg gccaggcgag catcccgctg ttgaacggcc tgatgccgaa
      961 cttcaggttc ccccagtcgt cgctggtcta ctttcagttc gtgttcgcgg ccatcacgcc
     1021 gatcctgttc atcggcagcg tgatcggccg gatcagcttc aaggtctggc tggtcttcgt
     1081 accgctgtgg atcacgttcg tctactgcgt gaacgcgttc ctgctc
//
LOCUS       DASRPQ010000085         1293 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2829782, whole genome shotgun sequence.
ACCESSION   DASRPQ010000085 DASRPQ010000000
VERSION     DASRPQ010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2829782"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1293
                     /locus_tag="VFD73_01005"
     CDS             <1..>1293
                     /locus_tag="VFD73_01005"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HZI72608.1"
                     /translation="DQQRLVERYHRDFVRAGAQLSASDQDRLRKLNQEEATLSTDFQN
                     KLLDATKNGALVVDRPTELQGLSKEEIAAAGQAAQERKLPGKYVIPLQNTTQQPAQAS
                     LMNRSVRQRLFEASIHRADRGDSNDTRAIVRRLAQLRTERAQLLGFPTYAAYALDNQM
                     AKTPDHAIGLLSQVVPPATRKARTEAEKMQGLIDRQNGGFTLAAWDWQYYAERVRQAE
                     YNLDETQIKPYLLLDRVLQDGVFLAANRLYGLTFKERKDIPVYHPDVRVFEVFDADGS
                     SLALFYTDYFKRDNKGGGAWMDYLVDPSGLTGQKPVVYNVANFSKPAPGMPALLTFDD
                     VTTMFHEFGHALHGMFAHVPYPTLLNTTTDFVEFPSQFNEHWALEPSVFANYAKHYET
                     GQVMPQDLVDRIKRSRTFNQGFSTTEYVAAALLDLAWHT"
BASE COUNT          271 a          425 c          367 g          230 t
ORIGIN      
        1 gaccagcaac gcctggtgga gcgatatcat cgcgacttcg tgcgtgccgg cgcccagctc
       61 tccgcctcgg atcaggatcg gcttcgcaag ctgaaccagg aggaggccac cctctccacc
      121 gactttcaga ataaactcct agacgctacc aagaacggag ccttggtggt ggaccgtccg
      181 actgagctgc agggtctcag caaggaagag attgccgctg cgggccaagc tgcccaggag
      241 cgaaagctgc cgggcaagta tgtcatccca ctgcaaaaca ccacccagca accggcacaa
      301 gcctcgctga tgaatcgctc cgttcggcaa cggcttttcg aggcatccat ccaccgggcc
      361 gaccggggcg actccaacga cacccgggca atcgtgcgcc gtttggcgca gctccggacg
      421 gaacgggcgc agctcctggg gttccccacc tatgcggcct acgcgctgga taaccagatg
      481 gccaagacac cagaccatgc catcggattg ctcagccagg tcgttccccc ggcaactcgg
      541 aaggcgcgga ccgaagcaga gaagatgcag ggactcatcg atcggcagaa cggcggcttc
      601 acgctggctg cctgggattg gcagtactac gctgagcggg tgcgtcaggc ggaatacaac
      661 ctggacgaaa cgcagatcaa gccatacctg ctgctggatc gggtgctgca ggacggtgtc
      721 ttccttgccg ccaatcggct ctatggcttg accttcaagg agcgcaagga cattccggtc
      781 taccaccccg acgtcagggt attcgaggtc ttcgatgccg acggctcatc cttggccttg
      841 ttctacaccg attacttcaa gcgcgacaac aagggtggcg gagcctggat ggactacctg
      901 gtcgacccct ccgggctgac cgggcaaaag ccggtggtct acaacgtcgc caacttctcg
      961 aagccggctc caggaatgcc ggcgctgctg acgttcgatg acgtgaccac gatgttccac
     1021 gaatttggcc atgcccttca cggcatgttc gcccacgtgc cgtatcccac cttgctcaac
     1081 accacaaccg acttcgtcga attcccctcg caattcaacg agcactgggc cctggagcca
     1141 agcgtctttg ccaattacgc caagcactat gagaccggcc aggtgatgcc gcaggatctg
     1201 gtcgatcgca tcaagcggtc tcgcacattc aaccagggct tcagcaccac cgagtatgtc
     1261 gcggccgcgc tcctcgatct tgcctggcac acc
//
LOCUS       DASRPQ010000086         1666 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_948303, whole genome shotgun sequence.
ACCESSION   DASRPQ010000086 DASRPQ010000000
VERSION     DASRPQ010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1666
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_948303"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1449)
                     /locus_tag="VFD73_01010"
     CDS             complement(<1..1449)
                     /locus_tag="VFD73_01010"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZI72609.1"
                     /translation="MEQDLIRKGGDGSQLITFASVEWYDQFERRRKMRKLLTLISLLA
                     VLSLVLTACGGGATPTEAPAATEPPATEAPAATEPPAAATEAPAATEAPATGEKVTIV
                     IESWRNDDLSIWQDTIIPAFEAKYPNIHVEFAPTAPAEYNGVLNTKLQGGTAGDLITC
                     RPFDASLELFQQGHLTSLNDLPGMENFGDVAKSAWITDDGADVFCVPMASVIHGFFYN
                     KDKFDELGLAEPATKEEFMNVLQALKDTGDTPLVMGTADQWESATMGFQNIGPNYWKG
                     EEGRQALIAGTAKFTDAPYVQTWQDLADWAQYLPDGYEAVKYPDAQSLFTLGQGVIYP
                     TGSWEISLFEDQADFNMGIFPPYVENAGDACYISDHTDIAIGMNAASPHPEESKTFLS
                     WVASDEFAALYANALPGFFPLSNAQVTLDDPLANEFLSWRQQCESTIRNSYQILSRGE
                     PNLENELWRVSAGVMNGSITPEQAGEEVQAGLD"
     gene            complement(1462..>1666)
                     /locus_tag="VFD73_01015"
     CDS             complement(1462..>1666)
                     /locus_tag="VFD73_01015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72610.1"
                     /translation="PLRFVLGGGLGLAGFEFIVPAALHELSQRTIPESRSLLEVLPSE
                     VDSPAIGAACLVWYARAGETANS"
BASE COUNT          314 a          479 c          527 g          346 t
ORIGIN      
        1 atcgagacca gcctgaactt cttcgccagc ctgttcgggg gtgatcgagc cattcatcac
       61 gcccgcgctc acacgccaga gctcgttctc gagattgggt tcgccccgcg agaggatctg
      121 gtaggagttg cggatcgtgg actcacactg ctggcgccag ctcaggaact cattcgccag
      181 cgggtcgtcc agggtgacct gggcattgct cagcgggaag aagccgggca gggcattggc
      241 atacagggcc gcgaattcat cggaggcaac ccagctcagg aaggttttgg attcctcggg
      301 gtgcgggctg gcagcgttca tgccaatggc aatgtcggtg tggtcgctga tgtagcaggc
      361 atcgccggcg ttctccacat agggcgggaa gatgcccatg ttgaagtcgg cctggtcttc
      421 gaagagactg atctcccacg aaccggtcgg gtagatgacg ccctgtccga gggtgaacag
      481 actctgcgca tcaggatact tcactgcctc ataaccgtcg ggcaggtatt gcgcccagtc
      541 ggcaaggtcc tgccaggtct ggacgtaggg tgcatcggtg aacttggcgg tgccggcgat
      601 caacgcctgg cggccttcct cgcccttcca gtagttggga ccgatgttct ggaagcccat
      661 cgtggcagat tcccactggt cggcggtgcc catcacgagc ggggtatcgc cggtatcctt
      721 gagggcctgg agcacgttca tgaactcttc cttggtggcg ggttctgcca gtccgagctc
      781 gtcgaactta tccttgttgt agaagaaacc atggatcacc gaggccatcg gcacacagaa
      841 gacatccgcg ccatcgtccg tgatccaggc gctcttggcc acgtcgccaa agttttccat
      901 gccgggcagg tcattcaggg aagtcaggtg cccctgctgg aacagctcga gcgaggcgtc
      961 gaagggacgg caggtgatca ggtcaccggc ggtgccgccc tgcagcttag tgttgagcac
     1021 accgttatat tcggcgggag ccgtgggggc gaattccacg tggatgttgg gatacttggc
     1081 ttcgaaggcg gggatgatgg tatcctgcca gatcgagaga tcgtcattgc gccagctctc
     1141 gatgacgatg gtgactttct caccggtggc gggagcctcg gtcgcagctg gcgcttccgt
     1201 cgcagcggcg gggggttcgg tcgcagccgg tgcttctgtg gctggtggtt cggtggctgc
     1261 cggagcttcg gttggcgttg ctccaccacc acaggcggtg agaaccaggg aaagtactgc
     1321 cagcaggctg atcagggtta acaacttacg catttttctt ctcctttcaa attggtcgta
     1381 ccattctaca cttgcaaagg tgattaactg agaaccatca cctcctttcc ttataagatc
     1441 ctgctccaat ggatcaaagc ttcaactatt tgctgtctct ccagcgcgag cataccagac
     1501 caggcaggca gccccgatcg ccggcgagtc gacctcggag ggaaggacct ccagcagact
     1561 gcggctctcg gggatggtcc gctggctcag ctcgtgcaga gcagccggta cgatgaactc
     1621 gaagcccgcc agccccagcc cgccgcccaa tacaaaacgc aagggg
//
LOCUS       DASRPQ010000087         1033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2521354, whole genome shotgun sequence.
ACCESSION   DASRPQ010000087 DASRPQ010000000
VERSION     DASRPQ010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2521354"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..495
                     /locus_tag="VFD73_01020"
     CDS             <1..495
                     /locus_tag="VFD73_01020"
                     /inference="COORDINATES: protein motif:HMM:NF017538.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqiA/YcfP family alpha/beta fold hydrolase"
                     /protein_id="HZI72611.1"
                     /translation="AFVREQGFEKVCLLGSSMGGGTALWYSALHPDHIVAGLHIAPAL
                     QMEKGLTAWAGPERCRTWQETGTIHFENDLVSCELSWDLIEDLRRHAFEDLLQRYRTP
                     ALLLQGKLDTSVPWKDVSDFATRCPYPGIELHLFADGDHRLTDRKGRLWELMLEFLRG
                     RALV"
     gene            603..839
                     /locus_tag="VFD73_01025"
     CDS             603..839
                     /locus_tag="VFD73_01025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72612.1"
                     /translation="MLRKVGLLTLLLALTLLATGVAQATPLAGSMRASESNGIVDRFW
                     DWFQSLFRFGGSSSGEIKSLWEGEGSHAHPNGNH"
BASE COUNT          163 a          337 c          317 g          216 t
ORIGIN      
        1 gccttcgtgc gtgagcaagg tttcgagaag gtctgcctcc tcggctcctc catgggaggc
       61 ggcaccgccc tctggtactc cgctctccat ccggaccaca tcgtggccgg cctccacatc
      121 gcgcccgcgc tccagatgga gaagggcctc acggcctggg ctggaccgga gcgctgccgc
      181 acctggcagg aaacgggcac gatccacttc gaaaacgacc tcgtctcctg cgagctgagc
      241 tgggacctga tcgaggacct ccgccgccac gccttcgaag acctcctcca gaggtaccgc
      301 acgcccgcgc tcctcctgca aggcaagctc gacacctccg tcccctggaa ggacgtctcc
      361 gacttcgcca cccgctgccc ctaccccggc atcgagctcc acctgttcgc ggacggcgac
      421 catcggctca cggaccgcaa ggggcggttg tgggagctga tgctggagtt cctgcgcggg
      481 cgtgcgctgg tctgagaaga ccccctttcc cgctttcggg gaaaagtgcc actctttcca
      541 gtagagggac gcctggcggc catgggggcc gccattttgg gtttcccagg gggaggattt
      601 ttatgcttcg aaaggtgggt ctgctcactc tgctcctagc cctgaccctg ctggctaccg
      661 gcgttgctca ggcgacgccg ctggcagggt cgatgcgggc gtccgagtcc aatgggatcg
      721 tggatcggtt ctgggactgg ttccaatcgc tctttcggtt tggcggatcg tcctcgggag
      781 agatcaagtc gctctgggag ggtgagggaa gccacgcgca tccgaacggc aaccactgag
      841 cccctgtcga gcgccggatc gaactgatcc ggcgccctct ttgttttttg tcacgctttt
      901 cggttctcag gcatcttttc ttgtagatgc cactcctctg ccaatctaat cgaccgtctg
      961 ggcagcactt ccgccgtgat tacggccgta agcggaagtt atacgcgggc ctgaagactt
     1021 ttggagggtt tga
//
LOCUS       DASRPQ010000088         1460 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1575767, whole genome shotgun sequence.
ACCESSION   DASRPQ010000088 DASRPQ010000000
VERSION     DASRPQ010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1460
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1575767"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1460
                     /locus_tag="VFD73_01030"
     CDS             <1..>1460
                     /locus_tag="VFD73_01030"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HZI72613.1"
                     /translation="VRELFEGSFRLDLVHPYPQPDPADLERAKPFMERLERFMRERVD
                     SDKIDREGKVPAEIVKGLGEIGAFGIKIPVEYGGLGLSQYSYTHAIGLVTSQDGNLTA
                     LLSAAQSIGVPTPLKLFGTPAQKKKYLPRLAKGAVSAFALTENHVGSDPASLTTTATL
                     SEDGRSYILNGEKLWCTNGTIAELMVVMARTGPKKITAFIVETNWPGVEVVQRLHFMG
                     LKALENGIIRFSNVRVPVENVLWGEGKGLKLALITLNTGRLTLPASAVAGAKRCLEVA
                     RRWASERVQWGAPIGKHDAIAQKIGRMAADTFAMEAVSDLASLMADRGGTDIRLEAAM
                     AKMWNTEIGWRIVDDTLQIKGGRGYETADSLRSRGERPDAVERMMRDYRINLIFEGSS
                     EIMRLFIAREAVDTHLKLAGDLIDPKAPMGKKIQALLRSGAYYAYWYPKLWLATGIIP
                     RYGEFGALATHIRFVARSCRRLARTLFHCMVRFGPK"
BASE COUNT          281 a          435 c          492 g          252 t
ORIGIN      
        1 tcgtgcgcga gctgttcgag ggttcgttcc ggctggacct ggtccatccc tacccgcaac
       61 ccgaccccgc agatctcgag cgcgccaagc cgttcatgga gcgactcgag cggttcatgc
      121 gggagcgggt ggacagcgac aagatcgatc gagaaggaaa agttcccgcc gagatcgtca
      181 aaggactggg cgagatcggc gcgttcggga tcaagatccc ggtcgagtat ggcgggctgg
      241 ggttgagcca gtacagctac acccacgcca tcggactggt caccagccag gatggcaatc
      301 tcacggcgct cctctcggcg gcgcagtcga ttggcgtgcc cacgcctctc aagctgttcg
      361 gtacgccggc ccagaagaag aagtatctgc ctcggctggc caagggtgcc gtctccgcgt
      421 ttgccctgac cgagaatcac gtcggctccg atccggcaag cctcaccacg acagccaccc
      481 tatccgagga tggcaggagc tacatcctga acggggaaaa actctggtgt accaacggca
      541 ccattgccga gctgatggtg gtcatggcgc ggaccggccc gaagaagatc accgcgttca
      601 tcgtggagac gaactggccc ggtgtcgagg tggttcagcg gctccacttc atgggactga
      661 aggccctgga gaacggcatc atccggttca gcaacgtgcg ggtcccggtg gagaacgtgc
      721 tctggggaga aggcaaggga ctgaagctgg cgctgatcac cctgaatacc ggacggctga
      781 cgctgccggc atctgcggtg gcgggcgcca aacggtgtct agaggtcgct cgccgctggg
      841 cctcggagag agtccagtgg ggcgctccga tcggcaagca cgacgccatt gcgcagaaaa
      901 tcggccgcat ggccgccgat acctttgcga tggaagcggt ctccgacctg gcttccctca
      961 tggcagaccg gggtgggaca gacatccggc tcgaggccgc catggccaag atgtggaaca
     1021 cggagatcgg ctggcggatc gtggatgaca cgctccagat caagggaggc cgtggctacg
     1081 agacagcgga tagcctgcgg agccgaggcg agcggccgga cgcggtggag cggatgatgc
     1141 gcgactaccg gatcaatctg atcttcgaag ggtcgagtga gatcatgcgg ttgttcatcg
     1201 cccgtgaagc ggtggacacg cacctgaagc ttgccggtga cctcatcgac cccaaggcac
     1261 cgatggggaa aaagatccag gcgcttcttc gttcgggagc gtattacgcg tactggtatc
     1321 ccaagctctg gctcgccacg gggatcatcc cgcgttatgg cgagttcggc gcgctggcga
     1381 cccatattcg gttcgtggcc cgctcctgtc ggcggctcgc gcggacactg ttccattgca
     1441 tggttcggtt cgggcccaag
//
LOCUS       DASRPQ010000089         2290 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_321922, whole genome shotgun sequence.
ACCESSION   DASRPQ010000089 DASRPQ010000000
VERSION     DASRPQ010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2290
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_321922"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            127..1527
                     /gene="hemG"
                     /locus_tag="VFD73_01035"
     CDS             127..1527
                     /gene="hemG"
                     /locus_tag="VFD73_01035"
                     /EC_number="1.3.3.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004729 - oxygen-dependent
                     protoporphyrinogen oxidase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase"
                     /protein_id="HZI72614.1"
                     /translation="MASVAVIGGGVTGLTAAFNLKQRGFQVVLYEAGRRVGGSVLTER
                     RDGYIAELGANSMTRPNPAVGQMFTELGLDSSRISASPEAAHRYVVRRGKPVRVPLSP
                     AELLTSRLLSNTAKLAVFGEPLIEATDTPMEESVAAFVRRRFNQEIVDYLANPFVAGT
                     FAGDPEQLSLRHALPNLQALERTQGSLIKAYMKGMKARREPGHSAPAGQRLLSFSKGL
                     AEIPEALEHRLKGVIRLGSPVTQIRAGNKTWTVGAAFQAAEVYDAVIYAAPAYALDDI
                     DLDFPGGERLSTLSSIDYPPVAVLALGFRREDVTHPLDGFGFLVPEVERRRILGAIFS
                     SSLFPGRAPSGHVLLTLFLGGTRDPDFVDTDPQTLTARVLDELRLLLGVQGDPTFRAH
                     QVWPKAIPQYVLGYGRFKDIMEHTEQANTGLLLAGSYRDGISLADALASGEKAATRVA
                     ASLESVASGPVPSEPH"
     gene            1524..>2290
                     /gene="hemC"
                     /locus_tag="VFD73_01040"
     CDS             1524..>2290
                     /gene="hemC"
                     /locus_tag="VFD73_01040"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: protein motif:HMM:TIGR00212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HZI72615.1"
                     /translation="MNPPAVPLRIGTRSSALALWQTERIREQLRLRGWETHRVELKTT
                     GDLAPDVPLSRLGSRAIFTKQIDDALIQGRIDLAVHSLKDLPTQLPEQIEIAAIAFRE
                     DPRDALVGRGPIRFGDLKEGALVATSSLRRRAQLLHLRPDIKVIELRGNVDTRLAKLD
                     SHPEWSAIVLASAGLVRLGLEHRIGERLPHALMLPAPGQGALAVTVRSGDLAVGSIVR
                     EALHEPETATAVAAERAFLRQLEGGCQVPVAAYAEMTP"
BASE COUNT          381 a          746 c          740 g          423 t
ORIGIN      
        1 ccgattcttt catgccatgc tggagagcgg gatctatttt cccccctcag cctttgaggc
       61 ctccttcagc tcgacagtcc atggtgccgc cgagctggat atgctggaat ccgccctcga
      121 ggtggcatgg cgagcgtagc cgtcatcggt ggcggggtca ccggcctcac cgccgccttt
      181 aacctgaagc agcgtggttt tcaggtggtg ctgtacgagg ctggccgacg ggtcggcggg
      241 tcggtcctga ccgagcgacg cgacggctac atcgctgagc tcggcgccaa ttccatgacg
      301 cggcccaacc cggccgtcgg gcagatgttc accgagctcg ggctcgactc ctctcggatc
      361 tccgcctcgc ctgaagcggc tcaccgctac gtggtccgcc ggggaaagcc ggtacgggtc
      421 ccgctgtctc cggccgagct gctcacctcc cgccttctct ccaacacagc aaagctcgcg
      481 gtcttcggcg agccgttgat cgaggccacg gacactccga tggaggagag tgtcgccgcc
      541 tttgtgcgcc gccggttcaa ccaggaaatc gtggattatc tcgccaatcc tttcgtggcg
      601 ggtacctttg ccggcgatcc ggagcagctc tcgttgcgcc acgcccttcc gaatttgcag
      661 gcgctggagc ggacccaagg ctcgctgatc aaagcctata tgaaaggaat gaaggctcgg
      721 cgggagcccg gccactctgc accggcgggt caacggctgc tctcgtttag caaggggctg
      781 gccgagattc ccgaggcgct ggagcatcgg ctgaagggag tgatccgact gggctctccg
      841 gtgacccaga tacgcgcagg caacaagacc tggacggttg gagcggcgtt tcaagccgcg
      901 gaagtatacg atgcggtcat ctatgccgcg ccggcgtatg cgctggacga catcgatctc
      961 gactttcccg gaggagagcg tctctccacg ctgtccagta tcgactatcc cccggtcgcg
     1021 gtgctcgcgc tgggttttcg ccgggaggac gtgacccacc cgctggatgg gttcggcttt
     1081 ctggtgcccg aggtcgaacg ccgcagaatt ctgggagcga tcttttcctc gtccttgttt
     1141 cccgggcggg cgccgagcgg acatgtcttg ctgaccttgt tcctgggagg cacgcgcgac
     1201 ccggacttcg tcgataccga tccccagacg ttgaccgctc gcgtcctgga cgagctgcgc
     1261 ctgctgctgg gtgtacaagg cgacccaacc ttccgggccc accaggtttg gcccaaggcc
     1321 attcctcagt acgtgctcgg gtatggtcgt ttcaaggaca tcatggagca taccgagcag
     1381 gccaacacgg gcttgctgct cgccggcagc taccgtgacg gaatctcgct ggctgatgca
     1441 ctggcttcgg gtgaaaaggc ggccacccgc gtggcggcca gtctggaatc ggtcgccagc
     1501 ggcccggtac catcggagcc gcattgaacc ctcccgcggt tccgcttcgg ataggtactc
     1561 gcagcagcgc gttggccctc tggcagaccg aacgaattcg ggagcaactg cggctgcgag
     1621 gatgggagac gcaccgggtg gagctcaaaa ccacgggcga cctcgcaccc gacgttcccc
     1681 tctcgcggct cggcagcaga gcgatcttca ccaagcagat cgatgacgcg ctcatccagg
     1741 ggcggatcga tctcgcagtc cactccctca aggatctgcc aacccagctt cccgagcaga
     1801 tcgagatcgc ggcaattgcg tttcgggaag atccccgcga tgcgctggtg ggtcgcgggc
     1861 caattcggtt cggcgatctg aaggaaggcg ccctcgtcgc caccagcagc cttcggcgaa
     1921 gggcgcagct gctgcatctc cgccccgaca tcaaggtgat cgagctccgc ggcaacgtgg
     1981 acacccgcct ggccaagctc gattcgcatc cggaatggtc ggccatcgtt ctagcttcgg
     2041 cagggttggt gcgactggga ctggagcatc ggatcggcga gcgactcccc cacgcgctca
     2101 tgctaccggc cccggggcag ggcgctctcg cggtgacggt gcgcagtggg gaccttgccg
     2161 tgggcagcat tgttcgcgag gcgctgcatg agccagaaac cgcgacggca gtcgccgccg
     2221 aacgtgcctt cctgcggcaa ctggagggag ggtgccaggt accagtcgcc gcctacgcag
     2281 aaatgacgcc
//
LOCUS       DASRPQ010000090         2990 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1575823, whole genome shotgun sequence.
ACCESSION   DASRPQ010000090 DASRPQ010000000
VERSION     DASRPQ010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2990
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1575823"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1500
                     /locus_tag="VFD73_01045"
     CDS             <1..1500
                     /locus_tag="VFD73_01045"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZI72616.1"
                     /translation="GGGVQGATIAWDASLRGLSVALVDQSDFGSGTSANSLRIVHGGL
                     RYLSRADFPRMRESIRERSALLRIAPDLVEPLPVLIPTSGNSPLQSRFAFALALAAND
                     LVSWNRNRGIEAHRHLPRSRLVSRAECLRQFPWFAGERLTGGAIWYDARLRQPHRLTL
                     SFVCSASRQGAVPANYVRVEGLLTGKAGVEGAAVTDIIGGQAFEIRARALVVAAGPWT
                     NGVIASTLGQGQPKVGPTKAFALNLVLGRRLSEVAVGVQSQRPAGRAPGSGGNRFLFI
                     HPQARSTLLGTWYSVSETEGVSGLCTRGAHELLDEVNAACHGLSLTAADIVRYQWGWL
                     PLKAGREAGSPLELAERPFIVDHGSGNGIRHLFSVEGVKYTTARAVAERVVDQVARDL
                     GAGAAACRTAETRLVESKAALDLYSDGTMNRATILRAIREEMALKLSDIVLRRYDGGV
                     LPALPRRLVAEVAEVAGSELGWTAQQQLSEIEEVLRQANSLPTVMEPTG"
     gene            1497..2690
                     /locus_tag="VFD73_01050"
     CDS             1497..2690
                     /locus_tag="VFD73_01050"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HZI72617.1"
                     /translation="MRILVLAPHPFFQARGTPLAVRRVLEFLSSRGHQLDLLTFHEGE
                     DVEIPNCRIHRIIRPLWIRNIRPGFSFKKVVCDLLMFAKCLRMVRRNRYDLIHAVEES
                     AFIAAAMQRMVGIPYVYDMDSSLAEQLVEAYPGLHFAFSTLRRCEALAVRHSLGVLTV
                     CAALEDVAHGHAPDKPIGRVEDTTLLQADETHSGNGHRRERLLPAGVDGQSPIAMYVG
                     NLEHYQGIGLLLEGFRHALSRVPNAHLVIVGGLPEDIAHYSRRALQLGIANRVHFLGP
                     RPISELEPLFHRADVLVSPRLKGLNTPMKIYSYLDSGTAVLATRLRTHTQILDDRTAY
                     LVAPEPAALGDGLVDLLSNPVLREQLASRAKAYVQQEFTPEAAHRKLGSFYSMMESRA
                     SGVGA"
     gene            2687..>2990
                     /locus_tag="VFD73_01055"
     CDS             2687..>2990
                     /locus_tag="VFD73_01055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72618.1"
                     /translation="MRRLEKLWYSPTLRTVLVYGVAGLGFSGSNLILARVLPTAEYAV
                     FTLVVALSNLAYSLAPAGVDGIVNRRQLDMGPQVLRRTLYPAVLVGLAFVAIAALSY"
BASE COUNT          497 a          931 c          967 g          595 t
ORIGIN      
        1 ggcggcggcg ttcaaggtgc cacgatcgcc tgggacgcga gcctgcgggg gctctccgtg
       61 gcgctcgtcg accagagcga cttcgggagc ggaacgtcgg ccaacagcct gcgcattgta
      121 cacggtggcc ttcgctatct ctcgcgcgcg gatttcccca gaatgcgcga gtcgatccga
      181 gagcgaagcg ctctcctccg aatcgctccc gatctggtcg agccccttcc cgtcctgatc
      241 cccacctccg gcaactcacc actccaaagc cgctttgcct ttgccctcgc actcgccgcc
      301 aatgacctcg tgtcctggaa ccgtaaccgg gggattgaag cgcatcggca ccttccccgc
      361 agccggctag tctccagagc ggaatgtctt cgacagttcc cctggtttgc cggggagcgc
      421 ctgactgggg gagccatctg gtacgatgcc cggttgcggc agccgcaccg gctcaccctc
      481 agctttgtgt gttctgcctc tcggcaagga gccgtgccgg ccaattatgt tcgagtagaa
      541 gggctcttga ccgggaaggc cggcgtggag ggtgccgccg tgaccgatat catcggcggc
      601 caggcgttcg agattcgagc ccgagcgctg gtggtggcgg cgggaccctg gaccaacggt
      661 gtgatcgcct ccaccttggg acaggggcag ccgaaagttg gtcccaccaa agcgtttgca
      721 ctgaatctcg tgctcggtcg ccggctgagc gaggtagcgg taggggttca gagtcaacgg
      781 ccagccggac gggccccagg atctggtggg aatcgctttc ttttcattca tccccaggca
      841 aggtcgacgc tgctggggac gtggtacagt gtcagtgaaa cggagggggt cagcggcctc
      901 tgcacacggg gggcgcatga gctgctggac gaggtcaatg ccgcgtgtca cggcctcagt
      961 ctcactgcag ccgatatcgt gcggtatcag tggggttggc tccctttaaa ggcaggccgc
     1021 gaagccggat cgccgctgga gctggcggag cgccctttca ttgttgatca cggctctggg
     1081 aacggaattc gtcatctgtt ctcggtggag ggggtgaaat atacgacggc ccgtgccgtg
     1141 gcagagcggg ttgtcgatca ggtggcgcgc gatctcggag cgggcgcggc agcgtgccgt
     1201 accgccgaaa caagattggt cgaatcgaag gctgctttgg acctgtattc cgatgggaca
     1261 atgaaccggg ccactattct tcgcgccatt cgtgaggaga tggcgctcaa gctcagcgat
     1321 atcgtgctgc gtcgctatga cggcggggtg ttgcctgcgc taccgcggag gcttgtcgcc
     1381 gaggtggcag aagtggcggg ctcggagctg gggtggactg cgcaacagca actctcggag
     1441 attgaagagg tgctgcgcca ggccaattcc ctcccgactg tgatggagcc caccgggtga
     1501 gaatcctcgt cctcgcgccg caccccttct ttcaggctcg aggtaccccg ctggcggttc
     1561 gtcgggtgct ggagttcttg agctcccgtg gtcatcagct cgaccttctg acgtttcacg
     1621 aaggcgagga cgtggagatc cccaactgcc ggatccatcg tatcatccgg ccgctctgga
     1681 tccgcaacat ccgtcccggc ttttcgttca agaaagtcgt ctgcgacctg ctcatgttcg
     1741 ccaagtgtct gcgcatggtc cggcgcaatc gctacgactt gatccacgcg gttgaagagt
     1801 ccgcattcat tgccgccgcg atgcagcgca tggtgggaat accgtacgtc tacgacatgg
     1861 actcgtcatt ggctgaacaa ctggtcgagg cgtatccggg attgcacttc gccttctcca
     1921 ccctcaggcg gtgcgaggcg ctcgcggtca ggcacagcct cggagtcctt accgtctgcg
     1981 ccgcgctgga agatgtcgcc cacggccacg cgccggacaa gccgatcggc cgggtcgaag
     2041 ataccacact cctgcaggct gatgagacgc actccgggaa cggccatcgg cgagaacgcc
     2101 tgctgcctgc aggagtggat ggccagagcc cgatcgcgat gtacgtaggc aatctcgagc
     2161 attaccaggg catcgggctc ctgctggaag gattccggca tgcgctgagc cgggttccca
     2221 acgcacatct ggtgattgtg gggggcctgc cggaggatat cgcccactac agccgccgtg
     2281 cgcttcaatt ggggatcgcc aaccgggtgc atttcctggg gccccggccg atcagcgagc
     2341 tggagccgtt gttccatcgc gccgacgtcc tggtctcgcc ccgcctgaag gggctgaaca
     2401 ctccgatgaa gatttattcc tacctcgatt cgggcaccgc ggtgctggcc acgcggctcc
     2461 gcactcacac tcagatcctg gacgatcgta cggcatatct ggttgcgccg gagcctgcag
     2521 cgctcgggga cggcctggtg gatctgctga gcaacccagt cctccgggaa cagctcgcga
     2581 gccgcgccaa agcctacgtc cagcaggaat tcactcccga ggcagcacac cgcaagctgg
     2641 gctcgttcta cagtatgatg gagtcgagag ccagtggggt gggcgcgtga ggagactgga
     2701 aaagctctgg tactcaccga cgctccgtac tgtgcttgtg tatggagttg ccgggctggg
     2761 cttttccggc tcgaatctta tccttgctcg cgtcctcccc accgctgagt acgccgtctt
     2821 cacgctggtc gtagccctgt ccaatctggc ctactctctc gcacccgcgg gagtggacgg
     2881 gattgtgaat cgtcggcagc tggacatggg accccaggtt ctccggcgca ctctctatcc
     2941 cgccgtcctg gtcggtcttg cgttcgtggc catcgccgcg ctgagctacg
//
LOCUS       DASRPQ010000091         1054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2521661, whole genome shotgun sequence.
ACCESSION   DASRPQ010000091 DASRPQ010000000
VERSION     DASRPQ010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2521661"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..605
                     /locus_tag="VFD73_01060"
     CDS             <1..605
                     /locus_tag="VFD73_01060"
                     /inference="COORDINATES: protein motif:HMM:TIGR04085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SPASM domain-containing protein"
                     /protein_id="HZI72619.1"
                     /translation="EADRVELANTQYYGWAWRNRAGLLPSRAQLERAEATVRATRGRL
                     DGRMEIIYVVPDYYSRYPKPCMGGWARRQLTVAPNGDVLPCPTAHALPLPRASVREHS
                     LAWIWERSPLFQRFRGTGWMPYPCQGCDRREIDFGGCRCQAFQLTGDAARTDPVCHLS
                     PDHGLVAAAVRAANSDTRAAREPLIFRPHPDRANVPRRAS"
     gene            615..>1054
                     /locus_tag="VFD73_01065"
     CDS             615..>1054
                     /locus_tag="VFD73_01065"
                     /inference="COORDINATES: protein motif:HMM:NF014689.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump"
                     /protein_id="HZI72620.1"
                     /translation="MLLNLIGLGFVLSLDNFRTAIILGPLRFAWPHALKIAVVFGFFD
                     GVAPLAGILLGHDVSQKIGGDIADSVGATALGLYGVYLIVRAMQTATQEELEAERRWS
                     IFGLPVPLSLDNVIAGTGLGMMGMSPLVPATLFGVITTLMTLLGL"
BASE COUNT          179 a          347 c          321 g          207 t
ORIGIN      
        1 tagaggcgga ccgcgtcgaa ctggccaaca cgcagtacta cggatgggcc tggcggaacc
       61 gggccgggct cctgccgagc agggctcagc tcgagcgcgc cgaggccacg gtgcgcgcca
      121 cacgcggtcg gctggacggc cggatggaga tcatttatgt cgttcccgac tactacagcc
      181 gataccccaa accctgtatg ggcggctggg ctcgacgcca gctcacggtg gcgccaaacg
      241 gcgacgtact cccctgtccg accgcgcatg ctcttcccct tccccgcgcc agcgtgcgtg
      301 agcactcact ggcatggatc tgggagcggt ctcccctctt ccagcgtttc cggggaacag
      361 gctggatgcc ctatccatgc caaggctgcg accgccgcga gatcgatttc ggcggatgtc
      421 gctgccaggc attccagctg accggcgacg ctgcccgaac cgacccggtc tgtcacctct
      481 cccccgatca cgggcttgtc gccgcagcgg tgcgggccgc caattccgac acgcgggcgg
      541 ccagggagcc acttatcttc cggccgcatc cagaccgagc caacgtgccg agaagggcta
      601 gctaggaccg agacatgctc ctcaacctta tcggcctcgg ttttgttctc agcttggata
      661 acttccgaac ggccatcatc ctcgggccgc ttcggttcgc gtggccccat gccctgaaaa
      721 tcgccgttgt tttcggtttt ttcgatgggg tggcgccgct tgctggaatt ctgctggggc
      781 atgatgtcag ccaaaagatc ggaggcgata tagcggacag tgtgggagcc actgcactcg
      841 gcttgtacgg cgtctacctg attgtccggg caatgcagac tgccactcag gaagaactgg
      901 aggcagagcg ccgctggtca atcttcggtc ttcccgtgcc gttgagcctg gacaacgtga
      961 tcgccgggac aggcctaggc atgatgggca tgtccccatt ggttccagcc acactattcg
     1021 gcgtcatcac caccttgatg actctccttg gtct
//
LOCUS       DASRPQ010000092         1239 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3457170, whole genome shotgun sequence.
ACCESSION   DASRPQ010000092 DASRPQ010000000
VERSION     DASRPQ010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3457170"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..666)
                     /locus_tag="VFD73_01070"
     CDS             complement(<1..666)
                     /locus_tag="VFD73_01070"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HZI72621.1"
                     /translation="MAIDFTLSEQQRQLQLDARRFAQNVLAPVVREADAEPDPLRAFQ
                     LTKPAYIEAYKHGIAFCMVPKEYGGGGLSNIDLILAAEEICAVDPGFACTILVNGLGL
                     LPVWYWGTDEQKNRFLRAATSDPSGEYIVGYAVSEPAGTPGGTANFDAPSPHPVGIGV
                     TARRDGDDYVLNGRKYWPCNVAGWDGQGANVSIVVVRTDSEKGGTEGLSAIMVERGTP
                     GVTY"
     gene            852..1136
                     /locus_tag="VFD73_01075"
     CDS             852..1136
                     /locus_tag="VFD73_01075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72622.1"
                     /translation="MLRARAAQALPWAIPLASVRLSLVADSTNALVGTLAAELVLGLA
                     GSRWSPEDHIVGLPGLRTGPFPNRNFEGLLVDNGTHDAAPSRCAPSSRSR"
BASE COUNT          213 a          420 c          368 g          238 t
ORIGIN      
        1 gtaggtcaca cccggggtgc cgcgctcgac catgatcgcg gagagacctt ctgtgccgcc
       61 cttttccgag tcagtgcgca ccacgacgat gcttacgttc gcaccctggc catcccagcc
      121 agccacgttg cacggccagt acttgcggcc gttcagcaca tagtcgtcgc cgtcccgccg
      181 ggcggttacc ccgattccca ctggatgtgg cgacggggcg tcgaagttcg cggtccctcc
      241 cggcgttccg gcgggctcgc tgaccgcata gccgacgatg tattcgccgg agggatcaga
      301 cgtcgccgcc cgcaggaacc ggttcttctg ttcgtcggtt ccccagtacc agacgggcag
      361 cagcccgagc ccgttgacca ggatggtgca ggcaaagccc ggatcgactg cgcagatctc
      421 ttcggcggcg aggattaggt cgatattgga cagacccccg cccccgtatt ctttgggaac
      481 catgcagaat gcgatcccat gcttgtacgc ctcgatatag gcgggctttg taagctggaa
      541 cgcccgcagc gggtcaggct cagcatcagc ctcccgtact acaggcgcga gaacgttctg
      601 ggcgaaccgc ctcgcgtcca gctgcagctg cctttgctgc tcgctaagcg taaaatcgat
      661 agccattggc atttcctcca gatctactcg gacgcctggc ttctcctaac tgccgcgaaa
      721 gtcgcgcttc atttgaagat cgcggcgact gtggccactt cttggccttg tctcaccgag
      781 ccgccctcac gccgactgcg ccaaacaggg gctgaccagg ctgacgcagc gaggtcaggt
      841 ctctggcaga catgctgaga gcacgggctg cgcaggcctt gccttgggcg ataccgctcg
      901 cctccgtgag gctgagtctg gtcgccgaca gcaccaacgc tcttgtcggt accctcgccg
      961 ctgaactggt ccttggcctg gccggcagcc gatggagccc ggaagatcac atcgtcgggc
     1021 tgcccggcct gaggaccgga cccttcccca accgcaactt cgaagggctt cttgtagaca
     1081 acggcacgca tgacgccgcc ccctcgcgct gtgcaccttc ctcccgaagc cgctagccgc
     1141 cctcatgcat ctggcgtccc taggttcaca gaggaggtgc taaacctcat gatgcatccg
     1201 ttggagcaag cgctgtcaag gtatcggtgg caagcggcg
//
LOCUS       DASRPQ010000093         2217 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1576565, whole genome shotgun sequence.
ACCESSION   DASRPQ010000093 DASRPQ010000000
VERSION     DASRPQ010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1576565"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..217)
                     /locus_tag="VFD73_01080"
     CDS             complement(<1..217)
                     /locus_tag="VFD73_01080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HZI72623.1"
                     /translation="MTESTTARPKSKSKGLDPARAEEYRGWLRQMLLIRRFEEKAGEA
                     YSLGKIGGFCHLYIGQEAVAVGSLGALG"
     gene            complement(214..1155)
                     /gene="lipA"
                     /locus_tag="VFD73_01085"
     CDS             complement(214..1155)
                     /gene="lipA"
                     /locus_tag="VFD73_01085"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HZI72624.1"
                     /translation="MTRSSPGSPAGGGPSGGFAPVRKPGWLKVRAPGGQNYVRIKSLM
                     RELELHTVCEEARCPNVGECWEHQAATFMILGDVCTRNCTYCAVTHGAPSAFDPLEPV
                     RLAEAVARMGLQHVVITSVDRDDLPNGGAEAFAGCITEIRRRLTDTSVEVLIPDFKGS
                     EPALSIVMDASPDILNHNLETAERLYPMVRPGGRYTRALGLLASARRMSPKALTKSGV
                     ILGMGEEWDEVVTCMRDLRQSDVNILTLGQYLRPSAAHLPVARYYTPDEFAELGEIAL
                     SLGFSHVQASPLTRSSYHAWEQARAAGSRPQTEGARL"
     gene            complement(1247..1663)
                     /locus_tag="VFD73_01090"
     CDS             complement(1247..1663)
                     /locus_tag="VFD73_01090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72625.1"
                     /translation="MRCRTCFVGALLLSTSCGGQLATSTSTSTAATPDQSFQCVQQQM
                     DALGYRRSSYDADERRVTGTKIDMKSRRADTQFRRMLDRLQAEVKPQSDGKTSIQVIA
                     HTFAEYTTQRGPTEVEEKASSEVRSAAQDLLERCRS"
     gene            complement(1770..>2217)
                     /locus_tag="VFD73_01095"
     CDS             complement(1770..>2217)
                     /locus_tag="VFD73_01095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72626.1"
                     /translation="TAVGAGGGFRFGRSQFSLTGSGYWGKGIGTTLQFNGVGGGNGAV
                     SGLGVGTDGDLRTSYGFIGQVTFTPASSKVTVAGSYGSSYLKADSGEPIDFKTENSLI
                     SGGIYFQATKSLKVVGEGNYAWTKEKVADTPKNKTFAPAFGFMLFF"
BASE COUNT          415 a          677 c          714 g          411 t
ORIGIN      
        1 gtcccagcgc tcccagactg cccacggcca cggcttcctg gccgatatac agatggcaga
       61 agccgccgat cttccccagg ctgtacgcct cccccgcttt ctcctcgaaa cgccggatca
      121 ggagcatctg ccggagccaa ccgcggtact cctcggcccg ggccgggtcc aggcccttgg
      181 atttcgattt ggggcgggcg gtggtggatt cggtcacaga cgggccccct ctgtctgggg
      241 acgcgagccg gcggctcgcg cttgctccca cgcatgatag gaggaccggg tcaaggggct
      301 ggcttgcacg tgggagaacc ccagtgagag ggcaatctca cccagctcgg cgaactcatc
      361 aggagtgtag tagcgggcca cgggaaggtg ggcggcggat ggcctgagat actgtcccaa
      421 cgtgaggatg ttgacgtcgc tctggcgcag atctcgcata caggtcacta cctcatccca
      481 ttcctctccc attcccagaa ttactcccga cttggtcagc gccttcggcg acatgcgccg
      541 ggcgctcgcg agcaggccga gcgcgcgggt ataacggcca ccgggacgta ccatgggata
      601 gagccgttct gcggtctcga gattgtggtt gagaatgtca ggcgaggcgt ccatcacaat
      661 ggacagggcg ggttccgagc ccttgaaatc ggggatgagc acctcgacag atgtatccgt
      721 caggcgccgt cggatttcag taatacagcc ggcaaacgcc tctgcaccgc cgttgggcag
      781 gtcatcgcga tcgaccgagg tgatcaccac atgctggaga cccattctgg ccactgcttc
      841 ggccagtcgc accggctcca gagggtcaaa cgcggacggg gcgccatggg tgacggcgca
      901 gtaggtgcag ttacgggtac acacgtcgcc aagaatcatg aaggtggcgg cctgatgttc
      961 ccagcactcg ccgacgttgg ggcaccgcgc ctcttcgcat acggtgtgca gttcgagctc
     1021 gcgcatcagg ctcttgatgc ggacataatt ctgtccgccc ggcgctctca ccttcagcca
     1081 gcccggctta cgtaccggcg caaatccgcc tgagggtccg ccgcccgcgg gactgccagg
     1141 cgaggaacgc gtcagttgta ccagaggcac ggccactacg gcttctcgct cctggaggag
     1201 aatggatgga ctcggatgga agctagcagg gacggagggc cgggagctag ctgcggcagc
     1261 gctccaggag atcctgggcg gccgagcgga cttcggagga ggccttctcc tctacctcgg
     1321 tgggcccgcg ttgcgtggtg tactcggcaa aggtatgcgc gatcacttga atactggttt
     1381 ttccatcgga ttgtggcttg acctctgcct gcagacgatc gagcatccgg cggaactggg
     1441 tgtctgcccg gcgtgatttc atgtcgatct tggtgccggt aacgcgacgc tcatcggcat
     1501 cgtaagagct ccggcgatat cctaaggcat ccatctgctg ctgcacgcat tgaaagctct
     1561 ggtcgggtgt tgcggcggtg ctggtactgg ttgaggtggc gagttgcccg ccacaggagg
     1621 tggacagcag aagggcacca acaaaacacg tgcgacagcg cattagctgc tccagggtaa
     1681 cgagaaggcc gaaatgtaac gcctgccggg ggtcagaaaa aaaacggccc tcgtgagagg
     1741 gccgtccgtt ttctacccag cggctgaggt tagaagaaga gcatgaagcc gaacgccggc
     1801 gcgaaggtct tgttcttggg agtatccgcg accttctcct tggtccaggc gtagtttcct
     1861 tcgccgacca ccttcagtga cttggtggcc tggaagtaga tgccgcccga gatcaggctg
     1921 ttctcggtct tgaaatcaat cggctcgcca gaatcggcct tgagatagct cgagccatag
     1981 ctgcccgcca ccgtcacctt gctgcttgcg ggggtgaagg tcacctggcc gatgaagccg
     2041 taggaggtgc gaagatcgcc atcggtgccg acgcccaatc cgctgacggc gccattgccg
     2101 ccgccgacgc cattgaactg cagggtagtg ccgatgccct tgccccaata ccctgacccg
     2161 gtgagcgaga actgcgaacg accgaaccgg aagccaccac ccgcgccgac cgcggtc
//
LOCUS       DASRPQ010000094         1941 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2203186, whole genome shotgun sequence.
ACCESSION   DASRPQ010000094 DASRPQ010000000
VERSION     DASRPQ010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2203186"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..832)
                     /locus_tag="VFD73_01100"
     CDS             complement(<1..832)
                     /locus_tag="VFD73_01100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72627.1"
                     /translation="MAAATARTNAAQQSKAEHAQALEGFTSENPNWTHRYGMVSFDDV
                     IVDPAVQRPEQPGEIAAIVRDYNPLALGTVTISRRVVPAIGPGVVCALCGQDGSKEHV
                     EMVLIDGQQRRRASQIVGYSGQVHADVHDGLTPADEATLFRQLNFRKAISPVVLFRNA
                     LREGNANALAVQAILDGLKIPFGTAKGYMAAKGAVALVQRKNGVTNLEWALRQVQRLY
                     DRGQGGVYEGAVVEAFFLLYERYGNRIDEKRLFEQLASDEGTTAALVEFARSLRRIKK
                     G"
     gene            complement(877..1905)
                     /locus_tag="VFD73_01105"
     CDS             complement(877..1905)
                     /locus_tag="VFD73_01105"
                     /inference="COORDINATES: protein motif:HMM:NF014273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HZI72628.1"
                     /translation="MKTTIRTSATMPIRQLRNVNLTWVRRDLGDLTDLCDSIDKDGLQ
                     LPVLLTPTLQVADGARRLVACEMLGWTQIPVLRTVDWDEVTSYYEQVAQLNEKYPHLP
                     MDWRSTTELYRGPLKELFAERLIELRREVLDQNAKAKRQGKKLDRPSRRDFYLMAAVK
                     TLGLRLTDFRAIREAYSILDKLEEPAARDEDPQAVKQRHEWAAILGDQLLESEADGGN
                     RLTAVLARLRMARRGEDPTTVREARGRRIGVADDSSFQARRAAARGKPMPPSGREIDA
                     ATIASIAQVVTHIADMAHGYGRVRPDAPVDVVAKAVDEIKTATSRLNALNKILRAFST
                     NPNLEERS"
BASE COUNT          293 a          642 c          610 g          396 t
ORIGIN      
        1 gccccttctt gatccggcgc agtgaccgag cgaactccac cagcgccgcc gtggttccct
       61 catcggaggc cagctgctcg aagaggcgct tctcgtcgat ccggttcccg tagcgctcgt
      121 agagcaagaa gaaagcctcc acgacggcgc cttcgtacac gccgccctgg ccccggtcat
      181 agagccgctg cacctgccgc agggcccatt cgaggttggt gacgccgttc ttgcgctgca
      241 ccagcgccac cgcacccttg gctgccatgt agcccttggc agtaccgaag ggaatcttga
      301 ggccgtccag gatcgcctgc actgccaggg cgttggcgtt gccttcccgc agggcgttgc
      361 ggaacagcac caccggtgag atcgccttgc ggaagttgag ctgccggaac agcgtcgcct
      421 catccgccgg agtcagaccg tcgtgcacgt cggcgtggac ctggccgctg tatccgacga
      481 tctgcgacgc cctgcggcgc tgctgcccgt cgatgagcac catctccacg tgttccttcg
      541 aaccgtcctg gccacacagg gcgcacacaa caccggggcc aatggcgggg accacgcggc
      601 ggctgatcgt gacggtgccc agggccagcg ggttgtagtc gcggacgatg gccgcgatct
      661 cgccgggctg ctcgggccgc tgcaccgccg ggtcgacgat cacgtcgtcg aagctgacca
      721 tgccgtagcg gtgggtccag ttcgggttct cgctggtgaa tccttccaat gcctgcgcgt
      781 gctcagcctt cgactgctgc gcggcattgg tacgcgctgt ggccgcagcc acgtccttga
      841 tgctgaccct gcccgatcgg gtggaggttg gagttgtcat gatctctctt ccaggttggg
      901 gttggtactg aaggccctga gtatcttgtt cagggcattg aggcggctgg ttgcggtttt
      961 gatctcatcc acggcctttg ccaccacatc aactggtgcg tccggccgca ctcggccgta
     1021 gccatgcgcc atatccgcga tgtgcgtcac cacctgtgcg atgctggcga tcgttgctgc
     1081 atcgatttcc ctgcccgaag gcggcattgg cttgccccgc gcagcagccc gtcgggcctg
     1141 gaacgatgag tcgtcagcaa cgcctatgcg gcggcctcgt gcctcgcgga cggtcgtggg
     1201 gtcttcgccc cgtcgtgcca tgcgcagccg tgccaggacc gcggtgagcc ggttcccgcc
     1261 atctgcctca ctttcaagga gctggtcgcc gaggatcgct gcccactcgt gccgctgctt
     1321 gacggcttga gggtcctcat cgcgggcggc tggctcttca agtttgtcca ggatgctgta
     1381 ggcctcccgg atggccctga agtcagtcag cctcagcccg agcgtcttga ccgcggccat
     1441 caggtagaag tcgcgccggc taggccggtc gagcttcttg ccctgacgct tggccttggc
     1501 gttttggtcc aacacttccc gacgcagttc aatgagccgt tcggcgaaca actccttcaa
     1561 cggcccccgg tacagctcgg tggtggaacg ccaatccata ggcagatgcg ggtacttttc
     1621 gttgagctgt gcgacctgct cgtagtagct ggtcacttca tcccagtcca ctgtgcgcaa
     1681 gacggggatc tgtgtccagc cgagcatctc gcaggccacc aaacgccgcg caccgtcggc
     1741 gacttgcagt gtcggggtga gcagcacggg cagctgcagg ccgtccttgt cgatgctgtc
     1801 acacaggtcg gtcaggtcac ccaggtccct cctcacccag gtcaggttga cgttgcgaag
     1861 ctgcctgatc ggcatcgtcg cagacgtcct gatggtggtc ttcacagttg gctccacttc
     1921 aacttatgaa cttacggcga g
//
LOCUS       DASRPQ010000095         1401 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3457351, whole genome shotgun sequence.
ACCESSION   DASRPQ010000095 DASRPQ010000000
VERSION     DASRPQ010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1401
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3457351"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1043)
                     /locus_tag="VFD73_01110"
     CDS             complement(<1..1043)
                     /locus_tag="VFD73_01110"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HZI72629.1"
                     /translation="MSHHILITGGAGFIGSHLADALLSRGHRVRALDCLSAQVHGPDA
                     PRPSYLNPEVELIRGDVRDPESVRRALKGIDVVYHLAATVGVGQSMYEIAQYTSVNNM
                     GTAVLLEALVARPVDRLIVASSMSLYGEGLYRCPDGSTCLGVERDLPQLRAGEWEIRN
                     ERGEILTPVPTPESKLPSLASIYALSKFDQERMCLMVGRAYGIPTTGLRFFNVFGTRQ
                     ALSNPYTGVLAIFASRLLNGNRPTVFEDGLQRRDFVSVYDVARACCLVLEHPGSAGGV
                     FNIGSGRSYTILEIAERIAKVLGKEYLEPEVTGKYRVGDIRHCFADISLARSALGYQP
                     QVQLDDGLEELAN"
     gene            complement(1101..>1401)
                     /locus_tag="VFD73_01115"
     CDS             complement(1101..>1401)
                     /locus_tag="VFD73_01115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72630.1"
                     /translation="VAELCRAKLKVEHKPLPQDDPTQRRPDISRAERLLGWQPSVPLR
                     QGLERTIPYFAHRLKRTSGHSAKHNGRLAPAGDIPFVERRRAYSEAANWTDRHRF"
BASE COUNT          250 a          453 c          438 g          260 t
ORIGIN      
        1 caattggcca gctcctccag cccgtcatcc agttgaacct gaggttggta ccccaatgcc
       61 gaacgggcca gggagatgtc ggcgaagcaa tgcctgatat cgcctacccg gtacttgccg
      121 gtaacctccg gctccagata ctccttcccc aggaccttcg cgattcgctc ggcgatctcc
      181 aggatagtgt aggaccgacc actcccgatg ttgaacaccc cgcccgcgga accgggatgc
      241 tccagcacca aacaacacgc ccgggccaca tcatagacgc tgacgaaatc tcggcgctgg
      301 agaccatcct cgaatactgt cggtcgattc ccgttgagga gccgggaggc gaagatcgcg
      361 agcacgccgg tgtagggatt ggagagtgcc tggcgggtgc cgaagacatt gaagaagcgc
      421 aggccggtcg ttgggatccc atacgcccgg ccgaccatga ggcacatgcg ttcctggtcg
      481 aacttggaaa gcgcgtagat cgaggcgagc gaggggagtt tactctccgg cgtcggaacg
      541 ggcgtgagga tctccccgcg ctcgttgcga atctcccact ccccggcacg gagctgcggc
      601 agatcgcgct ccacgcccag gcaggtcgag ccatcgggac aacggtagag tccctcgccg
      661 tacaggctca tgctcgacgc cacaatcagc cggtccaccg gcctcgctac cagggcttcc
      721 agcagtacgg ccgtgcccat gttgttgacc gaggtgtact gcgcgatctc gtacatgctc
      781 tgtcctacgc ccaccgtggc cgccagatgg tagaccacat cgatgccctt gagcgcccgc
      841 cggacgcttt ccggatcgcg cacgtctccc cggatcaact ccacttcggg attgagatat
      901 gacggtctcg gtgcgtcagg cccgtggacc tgagccgaaa ggcagtccaa ggcgcggacg
      961 cggtgaccgc gactcagcag tgcgtcggcg aggtgcgaac cgatgaatcc ggcgccacca
     1021 gtgatcagga tatgatgact catcctccgt ctcccgtttg ggtgcgcgcg ccatccagtg
     1081 gtgcgttccg gcgctcaatc tcagaatcgg tgtcggtcgg tccagttcgc ggcctcgctg
     1141 taggcacggc gccgctccac gaacgggata tctccggctg gcgccagccg accgttgtgc
     1201 ttggccgaat gtcccgatgt ccgcttcagc ctgtgtgcga aataggggat ggttcgctcg
     1261 agcccttgcc ggagcggcac gcttggttgc catccgagga gtcgttcggc ccggctgatg
     1321 tccggccgac gttgcgtggg atcgtcctgt gggaggggtt tgtgctcgac tttcagcttg
     1381 gcccggcaca gctcagcaac a
//
LOCUS       DASRPQ010000096         4602 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1892487, whole genome shotgun sequence.
ACCESSION   DASRPQ010000096 DASRPQ010000000
VERSION     DASRPQ010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4602
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1892487"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..1752)
                     /locus_tag="VFD73_01120"
     CDS             complement(40..1752)
                     /locus_tag="VFD73_01120"
                     /inference="COORDINATES: protein motif:HMM:TIGR00641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HZI72631.1"
                     /translation="MTARREDRRSKPTRRLSEQEVELERLRAEVAAWRARAAGLPVRA
                     DAAPISSSGRVVEPVYTALDLPSDIIAATGLPGNFPYTRGIHPTMYRGRLWTMRQFAG
                     FGTAEDTNARYKFLLERGQTGLSVAFDFPTLMGYDSDHPRSEGEVGKCGVAISSLADM
                     ETLFEGIPLDQVSTSMTINGPAAMLFCFYVAAAEKQGVPIDQLQGTIQNDILKEYMAQ
                     HAWIFPAEPALKIIVDLFEWAAEHTPQWNTISISGYHIREAGATAAQELAFTLANGFC
                     YVEHGIARGLDVDSFAPRLSFFWDVHNDFFEEIAKLRAARRIWARHMRERYRAKEPRS
                     WKMRFHCQTAGVTLTAQQPHNNVVRVAYQALAAVLGGTQSLHTNALDETLALPTEESV
                     RIALRTQQIIAYETGVPNVADPLGGSYYLEALTDQLEREAEGLFAEIEAQGGVVQAIE
                     SGWFQRQIAHSSMRFQAEVEQGRRTIVGVNDFVEEAEAPVEILKVGDEAEQTQRERMQ
                     RLRASRNRELVQQRLEALRAAAAEDRNIIPAMLDCARAYCTLFEIRHVLEEIYGSYRE
                     PIFF"
     gene            complement(1749..2834)
                     /gene="meaB"
                     /locus_tag="VFD73_01125"
     CDS             complement(1749..2834)
                     /gene="meaB"
                     /locus_tag="VFD73_01125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0015819 - lysine transport [Evidence IEA];
                     GO_process: GO:0015822 - ornithine transport [Evidence
                     IEA];
                     GO_process: GO:1903826 - L-arginine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HZI72632.1"
                     /translation="MDLDLLISELVSGKTAALARAISIVENMRPGFERLLGELHRSLG
                     RARRIGITGPPGAGKSTLVERLVSHYRSSGFKVGVIAVDPTSPFTGGALLGDRIRMES
                     IALDTGVYIRSMASRGSLGGLATTTREVCDLLDAAGFDRILVETVGVGQSELDVARMA
                     DSTVLVLVPESGDGIQTLKSGVMEIADIFAVNKADRSGADKLRQEIEVTLGIRRGNAF
                     RNVPAHHGRAIGVSDRRRVGVSEDDVLGGTASSAPPPLRSSAWEQPVVLTSAVKGDGV
                     ADLVAALDRHHDWLVASGELDQRRRRRLMERTREVVDRATRKWLWEETRAERLINDRL
                     DEVAGGEVSPYALAQDVLEELKQGEKI"
     gene            2970..3218
                     /locus_tag="VFD73_01130"
     CDS             2970..3218
                     /locus_tag="VFD73_01130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72633.1"
                     /translation="MTALWAAGIGAVVLLGLLSRIGERSTTPRSGSGDAPPSPERIDE
                     LLRAGRKIDAIKAYRVLHRADLKTAKDAIDARARELGS"
     gene            3293..3712
                     /locus_tag="VFD73_01135"
     CDS             3293..3712
                     /locus_tag="VFD73_01135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72634.1"
                     /translation="MRLLCLGLIGIGAVGCAGDSLNPAALDLSGTWVFTATIEETTQS
                     CNVTEAPITFTAVSADSLVGRGGEGGTIQCSNAARTFAASPYLEHATVFLSRRGTSVR
                     IDRHGSLLFQGEIRSDSRMSGTVTTDSLPGSWVAERQ"
     gene            3717..3875
                     /locus_tag="VFD73_01140"
     CDS             3717..3875
                     /locus_tag="VFD73_01140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72635.1"
                     /translation="MNNLLGFVGATLVGSIGWWMGERVGFMTAFILSMIGTGVGMYAG
                     RRLADYLS"
     gene            3926..4234
                     /locus_tag="VFD73_01145"
     CDS             3926..4234
                     /locus_tag="VFD73_01145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72636.1"
                     /translation="MRLSIGMVVSLGGVVACGTGPDQPATLGYFLNMNASISDTTPER
                     IRTFSCGVSGIFHLPSPAPATGTVRFSASVIRTIDEQPTVWIPTFSSTESGRSRQNDR
                     "
     gene            complement(4253..>4602)
                     /locus_tag="VFD73_01150"
     CDS             complement(4253..>4602)
                     /locus_tag="VFD73_01150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72637.1"
                     /translation="MWQENGSWHLLYSGNLWNTDQYAIGYAECETPLGPCRKVGDGPV
                     MASDGETAGPGGAEVFSDHEGRRWIAYHGWSAPLVGYASGGVRSLRLDRIDLVRASAA
                     EKSRDLPSGVASR"
BASE COUNT          838 a         1524 c         1398 g          842 t
ORIGIN      
        1 ccatggaccg tctgccgtcc ggctgccccg ttgccgacat cagaagaaaa tcggctcgcg
       61 ataactgcca taaatttcct cgagcacatg cctgatctcg aacagcgtgc aataggcacg
      121 cgcgcagtcg agcatggctg gtatgatgtt tcggtcctct gcggcagccg cccggagcgc
      181 ttcgagtcgc tgttgcacca gctcacggtt gcgtgacgcc cgcagccgct gcatccgttc
      241 ccgctgggtc tgctccgctt cgtctccgac tttcaggatc tcgaccggcg cttcggcttc
      301 ttccacgaag tcgttcaccc ccacgatggt tcgacgtccc tgttccacct ctgcctgaaa
      361 acgcatcgag gagtgcgcga tctgacgttg gaaccagccg gattcgatgg cctgtaccac
      421 cccaccctgg gcctcgatct cggcgaagag tccctcggcc tcgcgctcca gctggtcggt
      481 caacgcctcg aggtaatagg agccccccag cgggtccgcc acattgggga ctccggtctc
      541 gtaggcaatg atctgctgag tgcggagggc aatccgtacc gactcttcag ttgggagagc
      601 cagcgtttca tccagcgcgt tggtgtgcaa cgactgggtg ccgcccagca ccgctgccaa
      661 cgcctgatac gccactcgca cgacgttgtt gtgcggctgt tgagccgtga gtgtgacacc
      721 ggcagtctgg cagtggaagc gcatcttcca gctgcgaggt tccttggccc gatagcgctc
      781 gcgcatgtgc cgggcccaga tccgccgtgc cgcgcgaagc ttggcaatct cctcgaagaa
      841 gtcgttgtga acgtcccaga aaaatgacag gcgaggagcg aagctatcca cgtccagccc
      901 tcgggcaatg ccgtgctcca cgtagcagaa gccgtttgcc agcgtaaagg ccagctcctg
      961 cgcggcggtc gcgccggcct cccggatgtg gtagccggaa atcgaaatcg tattccactg
     1021 cggcgtatgt tccgccgccc attcgaataa atcgacgatg atcttgagcg cgggctccgc
     1081 cggaaaaatc caggcgtgct gcgccatgta ctccttcaag atgtcgttct gaatggtgcc
     1141 ctgaagctga tcgatgggaa cgccctgctt ctcagcggcc gccacataga agcagaagag
     1201 catggccgca gggccgttga tcgtcatgga ggtcgagacc tgatccagcg ggatcccttc
     1261 gaacagcgtc tccatgtcgg ccagactcga aattgccact ccgcacttcc cgacctcgcc
     1321 ctcggagcgg ggatggtcgg agtcgtagcc catcagggtc ggaaaatcga aggcgaccga
     1381 tagtccggtc tgaccccgtt cgagcagaaa cttgtagcgc gcgttggtgt cttcggcggt
     1441 gccgaagccg gcgaactggc gcatggtcca gagccggcct cggtacatcg tggggtggat
     1501 gccgcgggtg tagggaaagt ttccgggcag tccggtggca gcgatgatat cgctcggcag
     1561 gtcaagtgcc gtatacacgg gctcgaccac ccggcccgag gacgagatcg gcgcggcgtc
     1621 cgcgcgcacc ggcagaccgg cggcacgagc ccgccaggcg gccacttccg cccgtaggcg
     1681 ttccagctcg acttcctgct ccgaaagccg tctggtgggt ttgcttcgcc ggtcctcgcg
     1741 ccgtgccgtc atatcttctc cccctgcttc agctcttcga gcacgtcctg ggccagcgca
     1801 tatgggctca cctctccacc cgccacctca tccagtctgt cattgatcag ccgctcggcg
     1861 cgggtctctt cccatagcca tttccgggta gcgcgatcca cgacttcccg ggtgcgttcc
     1921 atcagccttc ggcggcgccg ctggtccagc tctccgctgg caaccagcca gtcgtggtgc
     1981 cggtccagcg cggcgacgag gtcggcaacg ccgtctccct tcaccgcgct cgtaaggacg
     2041 acaggttgtt cccaggcgga ggagcggagg ggcggagggg cggaggaggc ggtaccgcca
     2101 agcacatcat cttccgacac tccgaccctc cgcctgtccg acactccaat cgcccgcccg
     2161 tgatgcgccg gaacgttccg gaacgcgttc ccacgccgga tcccgagcgt cacctcgatc
     2221 tcttgtcgta gcttgtcggc tccactgcgg tcggccttgt ttaccgcaaa gatgtcggca
     2281 atctccatta caccggactt gagtgtctga atcccatcgc ctgactccgg caccaacacc
     2341 agtacagtgg aatcggccat gcgcgcgaca tcgagctcgg actggccaac ccccacagtc
     2401 tcgaccagga tccgatcgaa gccggcagcg tcgagcaagt cacagacctc ccgggtcgtg
     2461 gtcgcgagac ctccgagcga gccccggctc gccatcgaac ggatatagac gccggtatcc
     2521 agagcgatcg attccatgcg gatccggtca cccagcaagg cacccccggt aaacggactg
     2581 gtaggatcga ccgcgatcac gccgaccttg aatccgctgg agcgatagtg gctcaccaga
     2641 cgttccacca gagtggattt tcccgcccca ggggggcccg taatcccgat gcgacgagcc
     2701 cggccaagcg atcggtgcag ctcaccgagg agtcgctcga agccgggccg catgttctcg
     2761 acgatcgaga tcgcccgggc cagtgccgcg gttttgccgg acaccagctc ggagatcagg
     2821 agatcgaggt ccatagaggg aaaagtcgcc tgccaggata ggtcaggcaa gcggcgccgt
     2881 cacttccgag gatgcagaac gccgcaggca accatctcgg cgagccaacc gtatattcct
     2941 tagcatacag cacctaccct ggaggtgaga tgaccgcact ctgggcggcc ggaataggcg
     3001 cggtggtact gctgggtctg ctgagccgaa tcggtgaaag gtcgacgacg ccgcgcagcg
     3061 gcagcggcga cgcgccacca tcaccggagc ggatcgacga gcttcttcgc gccgggcgaa
     3121 agatcgacgc catcaaggcg taccgggtac tgcatcgcgc ggacctgaag acggccaagg
     3181 acgcgatcga tgctcgggcc agggagttgg gatcctagca ccttgatcac cgccccactc
     3241 ctcggcagca ttcctgaggg ctggcgtccc tgaagaatcc tgagaggtgt cagtgcggct
     3301 gctttgtctc ggactgattg gcattggcgc agttggctgt gccggtgatt cgctcaatcc
     3361 cgcggcgttg gatctgagcg ggacctgggt ctttaccgcc accatcgaag agaccaccca
     3421 gagctgtaac gtcaccgaag cgccgatcac cttcaccgcg gtgagcgccg acagcctggt
     3481 cggccggggc ggcgaaggcg gaacgatcca atgcagcaac gccgcgcgca cgttcgcagc
     3541 gagcccttac ctcgagcacg ccaccgtctt tctctctcgt cgcggcacca gtgtccgcat
     3601 cgatcgccac ggctcactct tgttccaagg tgagatccgc tccgacagcc ggatgagcgg
     3661 tacggtcacc accgacagtc tgccgggcag ctgggtagcc gagcggcagt aagctgatga
     3721 acaacctgct tggctttgtg ggagcgacgc tggtaggcag catcgggtgg tggatgggcg
     3781 agcgcgttgg attcatgacc gccttcattc tcagcatgat cggaaccggg gtcgggatgt
     3841 atgccggccg ccggctggcg gattacctca gctgatcgtc cgggccacta accacgcacc
     3901 gggatgttta cgtccaggag cagggatgag actgtccatc ggcatggtcg taagtctggg
     3961 aggtgtcgtg gcatgcggca ccggtcccga tcagcctgcc acactgggct acttcctcaa
     4021 catgaacgcc tcgatcagcg atacgacccc tgaacggatc cgcacgttca gttgcggcgt
     4081 gagcggaatc tttcacttgc ccagcccggc ccctgcaacc gggaccgttc gcttttcagc
     4141 cagtgtcatc aggacgatag atgagcagcc tacggtttgg atcccaacct tcagttcgac
     4201 ggagtctggc agatccaggc agaacgaccg ataggatcag tctgcagccg ggttagcggc
     4261 tggccacgcc gctgggcagg tctctcgact tctccgccgc agacgctcgg accagatcga
     4321 tgcgatcgag tcgcaggctg cgaactcctc cgctggcata gcccaccagc ggcgcactcc
     4381 acccgtgata cgctatccag cgccgccctt cgtggtcgct gaagacctcc gcaccgcccg
     4441 ggccggcagt ctccccgtca gaagccataa ccggcccatc tcccaccttc cgacacggcc
     4501 cgagcggcgt ctcgcactcc gcatacccga tcgcatattg gtccgtgttc cacaaattgc
     4561 ctgagtagag cagatgccac gagccgttct cctgccacat cg
//
LOCUS       DASRPQ010000097         1569 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3457464, whole genome shotgun sequence.
ACCESSION   DASRPQ010000097 DASRPQ010000000
VERSION     DASRPQ010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3457464"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(214..633)
                     /locus_tag="VFD73_01155"
     CDS             complement(214..633)
                     /locus_tag="VFD73_01155"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HZI72638.1"
                     /translation="MSREENIAAHAHCHDLLAAREFDRLGEVFAANVVDHDPSSDQAP
                     GVEGVKQFWREFMMSFPDFRMEVDALSADEDYGTMVYRLSGTHQGDYMGIPPTGKHFE
                     VRGLQMGRFENSVIAERWGSSDSLGILSQLGISVKAV"
     gene            925..>1569
                     /locus_tag="VFD73_01160"
     CDS             925..>1569
                     /locus_tag="VFD73_01160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72639.1"
                     /translation="MPGDVLFNGTGAVLAGTLIDSSQIVTFTVGSGGLLTPAPGSPFP
                     AQATGPFGSEFRPTNPSQLFVSNAHAGNNLGSVSAFSVAANGNLKSIGASPFANLQTA
                     PCWVEITHNGRFLFAVKHGSSQHLQLRDQPRRLAEAAGSTVFNFPTGLTPQDARLSPD
                     GQVPLCRRHRSRQGKRVQGPRRQPDRAAILADISASGRSGVRHRRHRAIGAVTTL"
BASE COUNT          267 a          540 c          476 g          286 t
ORIGIN      
        1 ccgggggcgt gcagcgccgg gcacacttcc gcgtgccctg gaggaagaga gcgagagcag
       61 atgcctggcc tgctgctgta cttgctgctg tatccgcaaa gcagccggtt ccgggttcag
      121 caccggcaat ggcttttcgg cccaatgccg gacgaaacgc gtagccgggt atcgggcgac
      181 agcacggtga gttctgcacc ggcggcccgt cggctagaca gccttcaccg agatccccag
      241 ctgcgacaga atgcccaggc tgtcgctgct tccccaacgc tcggcgatca ctgaattttc
      301 gaacctgccc atctgaagac cgcggacctc gaagtgtttc ccggtcgggg ggatgcccat
      361 gtagtcccct tggtgggttc cggaaagacg gtagaccatc gtgccgtaat cctcgtcggc
      421 ggacagagcg tctacctcca tgcgaaagtc cggaaatgac atcatgaatt ctcgccagaa
      481 ctgcttgacg ccctcgacgc caggagcttg gtcagacgac ggatcgtggt cgacgacatt
      541 tgcggcaaat acctccccga ggcggtcgaa ctcacgtgcg gccaagagat cgtggcagtg
      601 ggcatgtgca gcgatgttct cttcccttga catctgcgtc tccctcatcg tcgggtcatg
      661 tgagcgcgac ggcgcacggc ggcttcgtca ttggcggcca cggcctgcat cagttccatg
      721 gcaagctcag gtcggcccgc tcggcagccg ggccagcccc gccagccacg tcgtcggcac
      781 gccatacctg gttagatgcc cgtgttgggc tcgctgtagt acaggaactc ggcgcgcacc
      841 ccgaacttca ccggtttcaa gatcaacccg gcgggagcgc tcacacctct cgcaggttcc
      901 acggtcaccc tgccttccgg atcgttgcct ggcgacgtcc tgttcaacgg cactggcgcg
      961 gtgctcgcgg gaacgctgat cgacagttcg cagatcgtca ccttcaccgt cgggtccggc
     1021 ggcctgctga cgcccgcgcc gggctcgccg ttcccggctc aggccactgg ccccttcggc
     1081 agtgagttcc ggcccacgaa cccgagccag ttgttcgtct ccaacgcgca tgccggaaac
     1141 aatctaggtt ccgtctcggc cttcagcgtg gcagccaacg gcaacctgaa gtccatcgga
     1201 gcctccccgt tcgccaacct gcagactgcg ccttgctggg tagagatcac gcacaacggg
     1261 cgcttcctct tcgccgtcaa acacggcagt tcccagcatc tccagctacg cgatcagccc
     1321 cggcggctcg ctgaggctgc tggcagcacc gtgttcaact tcccgaccgg cctgacgccg
     1381 caagacgccc gtctcagccc ggacgggcaa gttcctctat gtcgtcggca ccggagccga
     1441 caaggtaagc gggttcaagg tccgcggcgg cagcctgacc gagctgccat cctcgccgac
     1501 atctctgcca gcgggcgcag cggcgttcgg catcgtcgtc accgggccat cggggcagtg
     1561 acgaccttg
//
LOCUS       DASRPQ010000098         1657 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1892689, whole genome shotgun sequence.
ACCESSION   DASRPQ010000098 DASRPQ010000000
VERSION     DASRPQ010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1892689"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1372)
                     /locus_tag="VFD73_01165"
     CDS             complement(<1..1372)
                     /locus_tag="VFD73_01165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72640.1"
                     /translation="MRCVLALGFLLSLSSRGPAAAQSPTRDWRPEDRTIIGDFTRISA
                     IATTMDRVYIVSPSGVLLWNPQFQKWDGVVDPPDPGLLAGVFTGLADPLDNSLWLAAS
                     NSWVHYQPDIQLWEHGVVPDGVLGIAFDHNDPGAGLYLRTRSGWLQILRGGAVATPSN
                     APAQPLAPAAVADAVRSNPGLQANAAAILTDNRLRSVRYTAAARSADNRGWFLGTSGV
                     GALYLPDGAALPQRLTFGLPSVRAGAVFSWPGGVWVATDRTALSDASLTFVGTELEQF
                     HSYPGTSAMGTPFNQVRELAGQGRAVWAATDLGVARVEPAESTLQFIDERRGLPDSRV
                     FAIVSRNDRIVVGTAHGVARVSDSMRVERIAPNYSDAVYSVFPEGDSIWAGTPGGLLL
                     ALPNQSNLVRPAGLGSASLQASVVDLATLGDTLVALTFDQLLWRNPRSGQWTLGPNLS
                     ALLGRLR"
     gene            complement(1387..>1657)
                     /locus_tag="VFD73_01170"
     CDS             complement(1387..>1657)
                     /locus_tag="VFD73_01170"
                     /inference="COORDINATES: protein motif:HMM:NF013425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HZI72641.1"
                     /translation="TGGSGDILTGLVAANLAQGLEPITAAAVAAQALGGAADTAARRF
                     TARGVRPMDVVGALPDVWRDWEMLQSGRTPSRPPLLLELPRPQTV"
BASE COUNT          318 a          533 c          554 g          252 t
ORIGIN      
        1 tgcgcagccg cccgagcagt gccgacaggt tgggcccgag cgtccattgc ccgctccgcg
       61 gattccgcca gagcagctgg tcgaaggtga gtgcaaccag cgtatcgccc agggtggcaa
      121 gatcgactac gctcgcctgg agactcgccg atccaaggcc ggctggccgg accagattgg
      181 attgattggg cagcgcgagc agcagaccgc cgggagtgcc ggcccagatg gagtctcctt
      241 caggaaagac ggagtacacc gcatccgaat agttcggcgc gatccgttcc acccgcatcg
      301 aatcgctcac ccgagccacc ccatgcgcgg ttcccaccac gatcctgtcg ttccgggaca
      361 caatcgcgaa cactctgctg tcgggcagcc cccgccgttc atcgatgaat tgcagcgtgc
      421 tctcggcagg ctccactcgg gcgacgccga gatcggttgc ggcccagact gcacggccct
      481 gcccagcaag ctcgcgcacc tgattgaatg gcgtgcccat tgccgaggtg ccgggatagg
      541 aatggaactg ttccagctcg gtaccgacga acgtcagcga ggcgtcgctg agcgctgttc
      601 ggtcagtcgc aacccagacg ccgccaggcc agctgaacac cgcgccggca cgtactgacg
      661 gcagtccaaa agtgagtcgc tgaggcagtg ccgcaccatc gggaaggtag agcgccccta
      721 ctccggaggt gccgagaaac cacccgcgat tgtcggcgga gcgggcggcg gcggtgtagc
      781 gcaccgagcg gagtcggtta tcagtgagga tggcggcggc attggcctgg agaccgggat
      841 tggaccggac cgcatcggcg actgccgccg gggccagcgg ctgagcgggc gcattggacg
      901 gagtagccac cgctcccccg cgtagaatct gcagccagcc tgaccgggtg cgcaggtaga
      961 ggcctgcacc cggatcgttg tggtcgaaag cgatcccgag cacaccatcg gggaccacac
     1021 cgtgctccca gagctgaatg tcgggctgat agtggaccca gctgttcgag gccgcgagcc
     1081 agagcgagtt gtccagtgga tcggccaggc cggtgaacac accagcaagc aagcctggat
     1141 ccggaggatc gaccacgccg tcccattttt ggaattgcgg attccagagc aggacgccgg
     1201 acggagagac gatgtagacc cggtccatcg tggttgcgat ggccgagatc cgggtaaagt
     1261 caccgatgat ggttcggtct tcggggcgcc agtctctggt cggcgattgt gcggctgcgg
     1321 ggccgcgtga cgagagtgag agtaggaagc cgagggcaag aacacagcgc attcggcaat
     1381 ctacactcag actgtctggg gacggggaag ctccaggagc aacggaggcc gggacggagt
     1441 ccgtccactc tgcaacatct cccaatcgcg ccacacgtct ggcagtgcgc caaccacatc
     1501 cattggccgc accccacggg ccgtgaaccg tcttgcggca gtatcagcgg caccgccgag
     1561 cgcctgcgca gccacggccg ctgcggtgat cggctcgagc ccctgcgcca gattggccgc
     1621 caccaaaccg gtgaggatgt ctccactgcc tccggta
//
LOCUS       DASRPQ010000099         1825 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_9591, whole genome shotgun sequence.
ACCESSION   DASRPQ010000099 DASRPQ010000000
VERSION     DASRPQ010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1825
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9591"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..754)
                     /locus_tag="VFD73_01175"
     CDS             complement(<1..754)
                     /locus_tag="VFD73_01175"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HZI72642.1"
                     /translation="MPVLGLKADWHLAAAFLDSAVAAGAAPGAVLAIAYPGGRYIHAT
                     GQLGADEPEPTSGATIYDLASVTKVVGLTTALMFAVEDGLVQLDAPVARYVPAFAGSG
                     KEGVTVRMLLTHSSGLPAWRPLFREISNRDAAFALADSTPLEAPPGTRETYSDLGAIV
                     LTQVVEAAYHERLDSLLERRLFQPLGMTSTRYLPPIEWRERIAPSELDPWRGRVLRGE
                     VHDENAAIMGGVSGHAGLFASANDLLTFAEWIL"
     gene            complement(829..>1825)
                     /locus_tag="VFD73_01180"
     CDS             complement(829..>1825)
                     /locus_tag="VFD73_01180"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HZI72643.1"
                     /translation="SAIAAGVTSIMSAHIALPGINGGQMQPGTVAPNILTGILRDSLR
                     FQGLVITDALNMAGVANEYGAEAAVRAFEAGADLLLQPADPQTAIDAIAAAVARREIL
                     PERLSRSVKRVLELKRQLGLFARRTVPLDSVAEVVGRAEFQARARDMAARSIVLVKDS
                     GGTVFSLRRTRPPMTLVTYGEEDYRSVGTAMAGELRNRGFAITLFKLWPASGPASYDS
                     AETAIAQSPVALFVTADRPVPSRGTIGQIPDAMQALIASTAVSRPTILVSMGSPYIIS
                     ELPEVGSYLIGWRSNSVTEQAVARALAGVNPISGRLPISIPPEYARGWGVERRVP"
BASE COUNT          339 a          596 c          596 g          294 t
ORIGIN      
        1 ccagaatcca ctcggcaaag gtcagcagat cgttggccga ggcgaacagg ccggcgtgac
       61 ccgacacgcc gcccataatc gccgcattct catcgtgcac ctctccccgc agcacccggc
      121 cgcgccaggg atccagctcg gatggagcaa ttcgctctcg ccactcgatc ggcgggaggt
      181 aacgggtgga ggtcataccg aggggttgga acaaacgccg ctccagcagg gagtccaaac
      241 gctcgtggta tgctgcttcg accacctgag tcagcacgat ggcacccagg tcagaatagg
      301 tctctcgggt tccgggtggc gcctcgagcg gagtgctatc ggccagtgcg aacgccgcgt
      361 cgcggtttga gatttctcga aagagcggtc gccaggcggg aagtccgctg gagtgagtga
      421 ggagcatgcg gacggtaaca ccctccttgc cactcccggc aaaggcgggc acgtaccgcg
      481 caaccggcgc atcgagctgc accagaccgt cctcgaccgc gaacatcaga gcggtggtca
      541 ggccgaccac cttggtgacc gaagcaagat cgtagatcgt agcgccgctg gtcggctctg
      601 gctcgtctgc tccgagctga ccagtggcgt ggatgtagcg accgccggga taagcgattg
      661 cgagaacggc cccaggcgca gctcccgctg caactgccga atcgaggaaa gcggcagcaa
      721 gatgccagtc tgccttcagt cccagcacgg gcacaggcga agtcggcgat ggaggctgtg
      781 agccgcaggc agccaaggtc gcagcaagga gcaacgtcca cgcaccgatc acggcacccg
      841 ccgctcgacg ccccaccctc gggcatactc gggcggaatt gatatcggga gtcgaccgct
      901 gatggggttc acccctgcga gcgcgcgagc aaccgcctgc tccgtcacgc tgttggatcg
      961 ccatccgatc aggtaagacc cgacctccgg aagctcgctg atgatgtacg ggcttcccat
     1021 ggagaccaga atcgtgggac ggctgaccgc ggtggatgca atcagagcct gcatcgcgtc
     1081 cggaatctgg ccgatggtcc cgcgcgaggg caccggtcgg tcagcggtca cgaacaatgc
     1141 gaccgggctc tgcgcgattg ctgtttcggc cgagtcgtag cttgccggcc cgctggcagg
     1201 ccacagcttg aacagagtga tggcgaagcc gcggttcctc aactcaccgg ccatggcggt
     1261 tccaaccgag cggtaatcct cttcaccgta ggtaaccagc gtcatggggg gacgggtgcg
     1321 gcggaggctg aacacggtgc cgcccgagtc ctttaccagg acgatcgatc gcgcggccat
     1381 gtcacgcgct cgggcctgga attcggcgcg tccgaccacc tcggcgacac tgtcgagcgg
     1441 cacggtccgt cgcgcaaaga ggccgagctg ccgcttcagc tcgaggacgc gcttgaccga
     1501 ccggctcagg cgttcgggca gtatctcccg ccgagctacg gctgctgcga tggcatcgat
     1561 cgcggtctgc gggtcagccg gttggagcag cagatctgct ccagcctcga acgcgcgcac
     1621 cgccgcctcc gctccgtact cgttggcgac acccgccatg ttgagcgcgt cggtgatcac
     1681 cagtccctga aaccggagcg aatcgcgcag aatcccagtc aggatgttcg gtgcgacggt
     1741 tcccggttgc atctgccccc cattgatgcc gggcagtgcg atgtgcgccg acatgatcga
     1801 ggtcactccg gcagcgatcg cactt
//
LOCUS       DASRPQ010000100         2924 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3457562, whole genome shotgun sequence.
ACCESSION   DASRPQ010000100 DASRPQ010000000
VERSION     DASRPQ010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2924
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3457562"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..302
                     /locus_tag="VFD73_01185"
     CDS             <1..302
                     /locus_tag="VFD73_01185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72644.1"
                     /translation="MAEGRIIARIYLRPRETESYDKFNLAPGDITYWWVKFEPDTSQF
                     IRKSARGAELSLQGRHLSKTPHPPGSFQQAFAQWVWDPTDEKLNAGCPGACCKSP"
     gene            complement(307..816)
                     /locus_tag="VFD73_01190"
     CDS             complement(307..816)
                     /locus_tag="VFD73_01190"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HZI72645.1"
                     /translation="MNTRRPQQSASRGVLEVDWPFFGELCRALALRVARDYQPEIVLG
                     IAKAGVIPGVVVASIMQCDFASMTVTRNDPAAPPVLVSGPPSSVRGRRILLVDETCDT
                     GSTMRLALNEVRALRPAEVKTAVSFKTGEYAPDFHAFETENFIILPWDREIIQNGEII
                     VRPDYAARL"
     gene            1055..1507
                     /locus_tag="VFD73_01195"
     CDS             1055..1507
                     /locus_tag="VFD73_01195"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI72646.1"
                     /translation="MSFWKRMFGKRSRETVAPQRIDYLNEGLALERQGDFEAALTSYR
                     LAFRDNPSDSRILLNMAIACTKTGQDDEAIRHYKRALELDDSLGGAHYGVAFLLKKRG
                     DTQEAAKHLRAFLARPAKGPDAERWVKYAEAELQKMGGGNTPKASETR"
     gene            1504..2196
                     /locus_tag="VFD73_01200"
     CDS             1504..2196
                     /locus_tag="VFD73_01200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72647.1"
                     /translation="MIRSAGPLLLILMAGCSSLDETAGGVVALQIQLPALRTVEVGES
                     VQLSAVALDKDGLPVSAEITWRAPDPTLTVDPTGLITGAAVGTGRVQAFAGSLASDLA
                     SFTVILRPDTLMIVGDSVVVVDSTAAASTPLTVSVQSFSPPGTVISGWPVVYSITSPP
                     DVGGPHTVELPGAVLTDTVPTGTDGAVSTVTLNRVAGIAQPDTAIVEVRSFHTRGEPV
                     SGSGQRFIVIFQ"
     gene            2201..>2924
                     /locus_tag="VFD73_01205"
     CDS             2201..>2924
                     /locus_tag="VFD73_01205"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HZI72648.1"
                     /translation="MATPSTLNELYFGALERFASQPVAVRAKREGRWIELSYAALADR
                     VQNLSLGLLELGIQPGDRVAILSENRPEWAIADYACLTARYTDVPIYPTLPTKQVEYC
                     LCDSGAIAILVSSKHQLEKVATLRQRVPGLTHVISFDPDATGPGVMSLEQVYALGAAA
                     RSRRSGWMSEAIKAAPGDLATLIYTSGTTGDMKGVMLTHGNITYDVTTCCNLFSFRET
                     DECLSFLPLSHIFERMFGHYSMF"
BASE COUNT          534 a          949 c          912 g          529 t
ORIGIN      
        1 caatggcgga ggggcgaatc atcgcccgga tctacctgcg accgcgcgag acggagagct
       61 atgacaagtt caacctggcg cctggggata tcacgtactg gtgggtgaaa tttgagccgg
      121 acacgtcgca atttattcgg aaaagtgcgc ggggggctga gctctctctc caaggacgcc
      181 acttaagtaa gacaccacac ccgccagggt cattccagca ggccttcgcg caatgggtct
      241 gggacccgac agacgagaaa ctgaacgccg gatgtccggg agcttgctgc aaatcaccgt
      301 agcggactat agccgggctg cgtagtcggg acgaacgatg atctcgccgt tttggatgat
      361 ctcgcggtcc cagggcagga tgatgaagtt ctcggtctcg aaggcgtgga agtcgggagc
      421 gtactcgccg gtcttgaaag acactgcggt cttcacctcc gccggtcgca gcgcacgaac
      481 ctcgttcagc gcgagccgca tggtgctgcc ggtgtcgcag gtctcgtcca ccagaagaat
      541 ccgcctgccg cggacgctgg acggcggtcc cgagaccagc accggcggag cggccgggtc
      601 gttgcgggtc accgtcatcg aggcgaagtc gcactgcatg atcgacgcga cgaccacacc
      661 cggaatgaca ccggccttgg caatgccgag cacgatctcc ggctgatagt ccctggcaac
      721 gcggagggcc agtgcgcggc agagctcgcc gaagaacggc cagtcgactt ccagaacgcc
      781 gcgtgaggcg gattgttgcg gacggcgggt gttcaaagtg tctcgcaggt cagggctagc
      841 gtacggagtc cggcgtctgg cgttcaggaa ggtggtacgg ggaccgtgat ccgtccagtg
      901 gtaaggtaca gcaattcacc gctcctagaa acaacttgag gctcgagacc ctcgaatccc
      961 aatcgcccta gaccctcgcc gtattatcct ctatcttttc cccttcgcaa cgccttgtgc
     1021 ccgttcgact ttcctcggag acccctcgct cggcatgagc ttctggaaac gcatgttcgg
     1081 gaagcgatcg cgggaaaccg tggcccccca gcgtattgac tacctcaacg agggcctggc
     1141 tctcgagcgg caaggagatt tcgaagccgc actcaccagc tatcgcctgg ccttccggga
     1201 caatccttct gattcgcgca tcctgctcaa tatggcgatt gcgtgcacca agaccggtca
     1261 ggacgacgaa gcaatccggc actacaagcg cgcgctggag ctggacgata gcctgggggg
     1321 cgcacactac ggtgtcgcct ttctgctgaa gaagcgcggt gacacccagg aggcggccaa
     1381 gcacctgcgt gccttcctcg cgcggccggc caaagggccc gatgccgaac gctgggtcaa
     1441 gtacgccgaa gcggagctcc agaagatggg aggaggcaac actccgaagg catcggagac
     1501 gcggtgattc gttcggcggg cccgctgttg ctgatcctca tggcaggttg cagctcgctg
     1561 gatgagaccg caggcggcgt cgtggcactc cagatccagc tccccgccct ccgaaccgtc
     1621 gaagtgggcg aatcggtcca gctgtctgcg gtcgcgctcg ataaagatgg cctcccggtg
     1681 agcgccgaga ttacctggcg cgcccctgac cccaccctca ccgtcgatcc taccggcctc
     1741 atcaccggcg ctgccgtcgg taccggacgg gtgcaggcgt ttgccgggtc gctcgcgtcc
     1801 gatctggcat cattcaccgt cattctgcgg cccgacacat tgatgatcgt aggcgactcg
     1861 gtcgtggtgg tggactcgac cgccgctgcg tccacgccgc tcaccgtctc ggtgcagagt
     1921 ttttcacctc cgggcacggt catctccggc tggccggtgg tctacagcat cacctctcct
     1981 cccgatgtcg gtggcccgca taccgtcgaa ttgcctgggg cggtgctcac cgataccgtc
     2041 cctactggca cggatggtgc tgtctcgacg gtgaccctca atcgagtcgc cggcattgcc
     2101 cagccagaca ccgccatcgt cgaggtacgc tcgttccaca cgcggggtga gccggtttcc
     2161 ggctccggac agcgcttcat cgtcatcttc cagtaagtca gtggccacac cgagcaccct
     2221 gaacgagctc tacttcggcg cgctcgaacg attcgcctct cagccggtcg ccgtgcgggc
     2281 gaaacgcgag ggccgctgga tcgagctgag ctatgcggcg ctggcggacc gggttcagaa
     2341 cctgagcctg gggctgctcg agctcggcat tcagcccggt gaccgggtcg cgatcttgtc
     2401 ggagaaccgc cccgagtggg ccatcgccga ctacgcctgc cttaccgccc gctacaccga
     2461 cgtccccatt tacccgacgc ttccgacgaa gcaagtggag tactgcctct gcgactccgg
     2521 cgcgatcgcg atcctggtct cgagcaaaca tcagctggag aaggtcgcca cgctgcgaca
     2581 gcgggtgccc ggcctcacgc acgtgatcag cttcgacccg gacgccaccg ggcccggggt
     2641 catgagcctg gagcaggtgt acgcgctggg cgccgccgca cgttcgcggc gcagcggctg
     2701 gatgagcgag gcgatcaagg cagcacccgg ggatctggca accctgatct acacctcagg
     2761 caccaccggt gacatgaagg gggtcatgct cacccacggc aacatcacgt atgatgtgac
     2821 cacctgctgc aacctgttca gcttccggga gaccgacgag tgtctctcct ttcttccgct
     2881 gagccacatc ttcgaacgga tgttcgggca ctattcgatg tttc
//
LOCUS       DASRPQ010000101         1445 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_637481, whole genome shotgun sequence.
ACCESSION   DASRPQ010000101 DASRPQ010000000
VERSION     DASRPQ010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_637481"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            248..>1445
                     /locus_tag="VFD73_01210"
     CDS             248..>1445
                     /locus_tag="VFD73_01210"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI72649.1"
                     /translation="MTAPPKGFAEALHDRYLLERELGRGGMATVYLARDLRHNRLVGL
                     KVLRPELAVAVGPERFIREIRLTARLQHPHILPVFDSGEAHGRLWYSMPFVEGESLRA
                     RLNREGRLEVEDALKLIREVADALHYAHGQGIVHRDIKPENILLSQGHALVADFGIAQ
                     ALEVGTGTKLTETGLALGTASYMSPEQASGGQVDARSDLYSLGCVMYELLAGEPPYTG
                     PSIHAVIAKRFTEPVPAVQRLRPSVPPAVATAVERALALAPAERFPSVAAFSSALEPS
                     TGTIFPAARQWVRPRSRAPLLAAVAVAAALGLGIWLQSKGSARPGGTPTPVRLAVLPF
                     ENLGGSQAYLSDGIADGIRGKLAALPGVQVIAASSSDLYRNGGKPLSQVARELGVDHV
                     VAGQVRP"
BASE COUNT          246 a          472 c          472 g          255 t
ORIGIN      
        1 tcgcttccct cttcagattg gaaatgaagc cagaggccgc gccaagcgcg caggccgtcc
       61 gggaattcgc agcccgtcta ttcacaggac gtacaagggc tcatgctttc gacacggctg
      121 tcttactttg ggagagcata cgccgagtta gccgcaatcc gccaccggag cctaagctcg
      181 gtgatttgga cgaactggag gagcacgggc ccaggctcta cattagacct ctctctcgca
      241 gcactggatg accgctcccc ccaaaggctt cgccgaagct ctccacgacc gctacctcct
      301 agaacgagag ctcggccgcg gcggcatggc aaccgtttac ctcgcccgcg acctccggca
      361 taaccgcctg gttgggctca aagtgctgcg cccggaactg gcagtcgccg tcggccccga
      421 acggttcatc cgcgagattc gcctcaccgc tcgtctccag caccctcaca tcctgccggt
      481 cttcgattcg ggagaggctc atggtcgcct ctggtacagc atgccgtttg tcgaaggcga
      541 aagcttgcgg gcgcggctga atcgcgaggg ccggctggag gtcgaggacg cgctgaagct
      601 gatccgcgaa gtggccgacg ctctccacta cgcgcacggt caagggatcg ttcatcggga
      661 tattaagccg gagaacattc tcctctcgca gggacacgcc ctagtcgccg acttcggcat
      721 cgcgcaggcg ctggaggtgg gaaccggcac gaagctgacc gagacggggc tggcgttggg
      781 caccgcctcg tacatgagcc ccgaacaagc gagcggcggg caggtcgatg cgcgctccga
      841 tctctactcg ctcggctgcg tcatgtacga gctgctggca ggcgagccgc cgtataccgg
      901 tccttcgatc cacgccgtca ttgccaagcg attcaccgag ccggttccgg cggtacagcg
      961 cctgcggccg tctgttccac cggcggtagc caccgcagtc gagcgcgcgc tagcactggc
     1021 ccccgccgag cggttcccgt cggtcgctgc gttcagctcg gcgctggagc cttcgactgg
     1081 gaccatcttt ccggcggcaa gacagtgggt ccggccgagg tcgcgagctc cgctgctggc
     1141 ggcagtggcg gttgcagcgg cgctcggtct gggaatatgg ctgcagtcga aggggtccgc
     1201 tcgaccagga ggtaccccca caccagtacg attggcggtg cttcctttcg agaatctggg
     1261 tggcagccag gcctacctct cagacggcat tgccgacggt attcggggga agctggcggc
     1321 gttacccggt gtccaagtca tcgcggcgag cagcagcgat ctgtatcgga acgggggaaa
     1381 gccactctcg caggtcgccc gggagctcgg ggtggaccac gtggtggcgg gccaggtacg
     1441 tccgg
//
LOCUS       DASRPQ010000102         1263 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_323219, whole genome shotgun sequence.
ACCESSION   DASRPQ010000102 DASRPQ010000000
VERSION     DASRPQ010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_323219"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..181)
                     /locus_tag="VFD73_01215"
     CDS             complement(<1..181)
                     /locus_tag="VFD73_01215"
                     /inference="COORDINATES: protein motif:HMM:NF023583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit M
                     N-terminal domain-containing protein"
                     /protein_id="HZI72650.1"
                     /translation="MGDHELVAMTGGVSVTPTTKEAQRAELHKTIWRIANDLRGSVDG
                     WDFKSYVLGMLFYRFI"
     gene            596..823
                     /locus_tag="VFD73_01220"
     CDS             596..823
                     /locus_tag="VFD73_01220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72651.1"
                     /translation="MAIRVNRVAIGWGGIKLAAGMLARAISYWVASLLPAAGRATLKV
                     TMQVNGGEGSTGSAVQTRLGLDLPALHELRA"
BASE COUNT          212 a          388 c          434 g          229 t
ORIGIN      
        1 agatgaagcg gtagaacagc atgccgagca cgtagctctt gaagtcccag ccgtccacac
       61 tgccacgcag atcgttggcg atgcgccaga tggtcttgtg cagctcggct cgctgcgctt
      121 ccttggtagt aggggtcaca ctcacgccac cagtcattgc caccagctca tgatcgccca
      181 accgcgctcc gagacagggc atttggtccg gcgagttcca accgtacgac ctcaccagcc
      241 gtacagcacg caagtacagc aacgtgatcg gctgcgaacg actccgagcg accaccatcg
      301 gtcgctgact tgccccaacg accccgagcg acctcaccgc cgagagttcg catcgaggtg
      361 ctcaaacggg cacaagcgca cgttgccgaa tcggggccgt actcttacga ggcggcatgg
      421 cgtcggcgcg agcagcccct ggcaactagc cacaggtagc ttgccgggtg aatgatcagg
      481 aggacgccta tgggtgccca ggccgggacc tgaggctggt cgtgtggttt ccgtgtgcct
      541 cgttggggcc tgaattggcc gcgctggccc ttggcggcag tacgaggtga tcggcttggc
      601 gatccgtgtc aaccgggtgg cgatcggctg gggcgggata aagctagcgg cggggatgct
      661 ggcacgagct atctcgtact gggtggcctc cttgctcccc gctgctggcc gggcaacact
      721 gaaagtgacg atgcaggtca atggaggcga gggctcgacg gggtcagcag tgcagacgag
      781 gctaggactc gatctaccgg ccttgcatga gcttcgcgcc tgaccccggg acgatagggc
      841 atcaacgtcc gtgtctcacc gggatcgaag agcattttga ggtgatcgtt accggctggc
      901 cgagggtctg gaagtcaccg ccgatggccg ggtgtcgtgt cgcatgccgg gcctcgacgt
      961 gagcgtcgat cgcccggtct gtggcttgcc tgtgcgccct tcgcccggtg gtgctggcga
     1021 cagagggtgg tactgccacc cttcagatcg atcccggtgg tccgtaacct gaggtccagc
     1081 cggcaccaag aggcgggagg cacggcgtgg gggcgaatcc ggatggtgcg ctgctgagcg
     1141 cgtcggtcgc attcgctggc gcaaccatgc tgggcagcgc ggtagcgatc cgcgatcagc
     1201 ttcccggcca gcccctcggt gtgagcgtcc cgctgtcggt gccggctggg ttgctcgccg
     1261 gat
//
LOCUS       DASRPQ010000103         1805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1893234, whole genome shotgun sequence.
ACCESSION   DASRPQ010000103 DASRPQ010000000
VERSION     DASRPQ010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1805
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1893234"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..247
                     /locus_tag="VFD73_01225"
     CDS             <1..247
                     /locus_tag="VFD73_01225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72652.1"
                     /translation="SQSELTAPVAGLQAAAFSVVGLVLLARGLTDLLGRLVMSVTYPD
                     RMTLEWLAAALAEIAIGLAVFLGARGLVRLWHAIRRR"
     gene            455..>1805
                     /locus_tag="VFD73_01230"
     CDS             455..>1805
                     /locus_tag="VFD73_01230"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HZI72653.1"
                     /translation="MVTLVGRTLSAGLRVLELTGVTPNGELYRARYPSGREVAVLLLP
                     PDASNSEPFIALRQRLRDAIRIQHPNVAAIYEVAETDDQLVYVVVESLTGELLADTLA
                     RRGALPVSEALDLCRQAADGLQAAHEAGWVHGRLSPESILLSRAAGDGALVKLIGFTP
                     EFLLRSDDAELTSKPDAALEYSSPERIAGNAPDVPGDVYSLGAVLHHLLTGVPPRKGG
                     AAPEALRAVLARALDPSPDERFQTVADFAAALARPMEPVIHPAEPQPNQLPEPTRATR
                     RRFLPTLWPEERAVAATLLTVVAGLALLWITQRSGLLAIRRHQLEESAAVAPLSSDSI
                     SSSSAVLPPSRLPATPPSAPTMRRETVSSRIPASAPRVATGTAGADSLLVDVRSIDPT
                     IQTDLRYATANNFTGAPLPGYEAARALLRPEAAAALARVQASLRSKGLGLRILDAYRP
                     "
BASE COUNT          278 a          622 c          578 g          327 t
ORIGIN      
        1 ttcccaatcc gagctcaccg cgccagtcgc cgggctgcag gctgcggcct tctcggtcgt
       61 cggcctggtg ctgctcgccc gcggcctcac cgacctgctg ggccggctgg tgatgtcggt
      121 gacgtatccg gaccgcatga ctctggagtg gctggcagca gcgctcgctg agatcgcgat
      181 cggtctcgcc gtgttcctcg gagcgcgcgg gctggtcagg ctttggcacg ccatacggcg
      241 gcgataagcc gttctcaatg caacgatgct ggcgctcgtt cccgaatccc tattccctaa
      301 gggtgggcta tgccagcgca gcccaaagtt gctgagtgga tacctttggc ttacagtgtt
      361 caggtaaagg atgagcgtta tcgggaatgg cttggcagtt cgacagtacc cgctgtgacc
      421 gctgtaaagc ggagcacgac cgaggggcga ggccgtggtg actctggtcg gccgcaccct
      481 ctctgcaggc cttcgtgtcc tggagctcac cggcgtcacg cctaacggag agctctaccg
      541 cgcccgatac ccgagcgggc gcgaagttgc ggtcctgctg ctgccccccg acgccagcaa
      601 ctccgagccg ttcatcgcac tcaggcaacg cctgcgcgac gccatccgga tccagcatcc
      661 caacgtcgcg gcgatctatg aggtggccga gactgacgat cagctggtct acgtcgtggt
      721 ggagtctctc accggcgagt tgttggcgga cacgctggct cggcgcggcg ctcttccggt
      781 aagcgaagcc ttggacctct gccggcaagc ggcagatggg ctccaggccg cgcatgaagc
      841 cggctgggtt catgggagac tctcgccgga gagcattctg ctgagccgtg cggcgggcga
      901 cggtgcactg gtcaagctca tcggcttcac cccggagttc ctcctgcgct cggacgatgc
      961 cgagttgacg agtaagccgg acgccgctct cgagtactcg agtccggagc ggatcgctgg
     1021 aaacgcaccc gacgtaccgg gcgacgtgta tagcctggga gcggtgctcc atcacctgct
     1081 caccggagtg ccacccagaa aaggcggcgc cgctccggag gcgttgcgcg ccgttctcgc
     1141 ccgcgcgctc gatccctcgc cggatgaacg ctttcagaca gtggctgatt tcgcggccgc
     1201 actggctcgc cccatggagc cggtgattca tccagccgag ccgcagccca accagcttcc
     1261 ggagcccacc agggctacga gacgcagatt ccttccgacg ttgtggcccg aagaacgcgc
     1321 cgtcgccgcc accttgctca cggtggttgc cggactggcg ttgctctgga ttacgcagag
     1381 gtcgggactc cttgccatcc ggcggcatca gctcgaggaa tcggcggccg tagcaccact
     1441 ctccagcgat tcgatttcct cgtcgtccgc agtgctgccc ccgtcgcggc ttcctgctac
     1501 gccgccatcg gcaccgacca tgaggcggga gaccgtgagc tcccggattc ctgcgtccgc
     1561 tcctcgagtt gctaccggca ctgcgggggc ggactcgctc cttgtcgacg tacgctcgat
     1621 cgatcccacc atccagaccg atcttcgcta cgccacagcc aacaacttta ccggtgcgcc
     1681 gctcccgggc tacgaggcgg ctcgcgcgct gctccggccg gaagcggccg ccgcactggc
     1741 ccgggtgcaa gccagcctcc gcagcaaggg cctggggctc aggattcttg acgcctaccg
     1801 cccgc
//
LOCUS       DASRPQ010000104         2701 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2523764, whole genome shotgun sequence.
ACCESSION   DASRPQ010000104 DASRPQ010000000
VERSION     DASRPQ010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2701
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2523764"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1990
                     /locus_tag="VFD73_01235"
     CDS             <1..1990
                     /locus_tag="VFD73_01235"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HZI72654.1"
                     /translation="PIIWHSDDDSVATVSLEGVLVARSGGSTRITAELDEARSTVAIT
                     VAPSPVAALHISPPPETVVSGESFALTATPLDRWAGPLTGRTISWTVSDVGVAVVTAG
                     GWVITRNPGLVVLTATCENATASVSVNVVAKKAESVPAEGLDRPVRPAGRPQSEPWET
                     VPEPRPSPEPQRRRSRPAWVIGAGGAAMIAAGLWLVGGRRPQSDPAPLTETAAAPRES
                     AAGEPVSSNESGIKSGALPPGATADSSSPASITIVQRPATPLQLGTTADLVAEVRDVH
                     GDILGGHPISWSSTDSAVASVDSASGTVRAIGPGRAQIVATAGTRQDTARIVVHAGGK
                     QPVRAPGPTVEPVSLTMAPHDPIRVGDTTTLVVAAVNGAGKPLRRVRVTWSSSEPRVA
                     DVDAAGRVRAYSPGSTLIIARSGSESAMGPLTVLPASVASVNITGAQPLKVGDTLTLR
                     AEAQDQRGTSLSGRPVAWTSGNPDVAPVDSASGVVVAQQAGSAEITATVEGKSGTAKI
                     TILPQPRTGRSEPPPPTQAPPRVVASANDAAREHQKVLEQMVAGVEQCYQALHNKDVL
                     RVQALYNPADKADEDRLKKLNRILSTHEWDAQVGERQDGAQKVGDNTARMDFSFRLTW
                     KDAFGGRLSSDPAFRAEFSILGSQLTLSSCRIINSPKL"
     gene            complement(1996..2598)
                     /locus_tag="VFD73_01240"
     CDS             complement(1996..2598)
                     /locus_tag="VFD73_01240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72655.1"
                     /translation="MNRTVFLILTGTAISHQAAAQSAQAISIQFSGLYNGVFGDVFSN
                     LKDGFGGEAQLRYTPSALSIGAGFQYTVHKRPPLQPGEPDEARLYGGFVEPRYRIHTG
                     SNVVAPYVSARFSLLKVGFSGSGGSFSLSSSFIQLNAGGGLLYRMGPRVNLDMGATFG
                     YNRLGDGTLTNEATGQGRFVPASSGSNLVLRFGFAVGLGG"
BASE COUNT          522 a          851 c          874 g          454 t
ORIGIN      
        1 tcccatcatc tggcactccg acgacgattc cgtggcaacg gtaagtctcg aaggcgtgtt
       61 ggtggctcgt tccggcggca gcacccggat cacggcggag ctggatgagg cgcgctccac
      121 ggtagccatc actgtcgccc caagtcccgt tgcagccctt cacatctccc cgccgcctga
      181 gacggtcgtc tcgggagagt cgtttgccct gacagctaca cctctggacc gctgggcggg
      241 gccgctcacc ggtcgtacca tcagctggac ggtaagcgat gttggggtcg cagtggtcac
      301 cgctggaggt tgggtgatca cccggaaccc cggtctggtg gtgctgactg cgacgtgcga
      361 gaacgccacc gcgtcggtga gcgtgaatgt ggtcgcgaaa aaagccgaat cagttccggc
      421 cgagggactc gatcgcccgg tccggcccgc ggggcgccct cagtcggaac cgtgggaaac
      481 cgtcccggag ccccgccctt ctcccgagcc gcagcgtcgg cgctctcgtc cggcttgggt
      541 gattggcgcg gggggcgcgg cgatgatagc agctggtctg tggctcgtag gtggccgacg
      601 accgcaatcc gatccggctc ctctgaccga gacggcagcg gctccgcggg aatcggccgc
      661 tggagaacca gtttccagca acgaatccgg catcaaatct ggtgccctcc cacccggcgc
      721 cacagccgat agcagcagtc ctgcatcgat caccattgtc cagcggcctg ctacgccatt
      781 gcagttgggc accacggccg acttggtcgc tgaggttcgc gacgtccacg gcgacatcct
      841 ggggggacac ccgatcagct ggtcgagcac ggactccgcg gtggcaagcg tggattccgc
      901 gtccggcacg gtgcgcgcca ttggtcccgg ccgggcacag atcgtagcga ccgccggtac
      961 tcgccaggac accgcccgaa tcgtcgtcca tgctggaggc aagcagccgg tgcgtgcgcc
     1021 cggacccacc gtcgagccgg tttcgttgac gatggcacct cacgatccga ttcgagtcgg
     1081 cgacacgaca accttggtgg tggccgcggt gaacggcgcc ggtaagccgc tccgccgagt
     1141 gagagtgacc tggagctcga gtgagccgcg ggtagccgat gtcgatgccg ctggccgggt
     1201 gcgggcgtac tctcctggga gcacgctcat tatcgcccgg agtggcagcg agtctgccat
     1261 ggggccctta acggtgcttc ccgccagtgt tgcatcggtc aacatcaccg gtgcgcagcc
     1321 gttgaaggtg ggcgacacgc tcacgctgcg ggcggaggcg caagaccagc ggggcaccag
     1381 cctgagcggt cgaccggtgg cctggaccag cggcaacccg gatgttgctc cggtggattc
     1441 agcttccggt gtggtagtcg ctcagcaggc cggatcggcc gagatcactg ccaccgtcga
     1501 ggggaagtcg ggcaccgcga agatcacgat tctgccccaa ccccgaaccg gaagaagcga
     1561 accgccgcct ccaacgcagg ccccgccccg cgtggtcgcg tccgctaacg acgccgcacg
     1621 agagcaccag aaggtgctcg aacagatggt ggcaggagtg gagcagtgct atcaagcgct
     1681 ccacaacaag gacgtgcttc gggtgcaggc cctctacaat cccgcagata aagccgacga
     1741 agaccgtctg aaaaaactga atcgcatcct ctcaacccac gaatgggacg cgcaggttgg
     1801 tgagcggcaa gacggcgcac agaaggtggg cgacaatacc gcccgtatgg acttcagctt
     1861 ccggctgacc tggaaggatg cgtttggcgg acgtctgagc agcgatccgg cgttccgggc
     1921 ggagttttcg atcctgggga gtcagctgac gctgtcgagc tgccgtatca tcaactcacc
     1981 gaaactctag cgcgttcaac ctccaagccc cacagcgaag ccaaaacgca ggaccaaatt
     2041 tgaacccgag ctcgctggga cgaatctgcc ctgtccggtg gcctcattag tgagtgttcc
     2101 gtctcccaga cggttgtaac cgaaggtggc gcccatatcc aggttcaccc gaggtcccat
     2161 gcggtagagt aggccacctc cagcgttgag ctgaataaac gaggaggaga gagaaaacga
     2221 tcccccggac ccggaaaacc cgactttaag cagagaaaag cgcgccgaga cataaggcgc
     2281 aaccacatta ctccccgtgt ggatcctgta tcgaggctcg acaaaccctc cgtagagtct
     2341 cgcctcatcg ggttcaccgg gctgaagcgg cgggcgtttg tgtaccgtgt actggaaacc
     2401 agcgccgatt gaaagcgcgc taggtgtgta gcgaagttgg gcttctcctc caaatccatc
     2461 cttcagattg ctgaatacgt ctccgaagac cccgttatac aagccggaga actgaatcga
     2521 gattgcctgg gcggactgcg cggccgcctg gtgcgaaatc gcggtgccgg tgaggatcag
     2581 gaaaaccgtc cggttcaaat gcacgtcgag tcctgtcgga tcacgggatg atcggaacct
     2641 actcgtctaa ggggcaatcg ggggaggccc agagtgccgc gacaccgatc cggagctggt
     2701 c
//
LOCUS       DASRPQ010000105         1025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2523838, whole genome shotgun sequence.
ACCESSION   DASRPQ010000105 DASRPQ010000000
VERSION     DASRPQ010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2523838"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            64..>1025
                     /locus_tag="VFD73_01245"
     CDS             64..>1025
                     /locus_tag="VFD73_01245"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HZI72656.1"
                     /translation="MILTNPGGPGGSGLNLNVFLIDALKAEHLSAAAADYDWIGFDPR
                     GVGSSVPALTCQPNYFSPDRLPYNPKTKAILSYWKARSAKYAAACQTHSAAQAALLKN
                     MTTVDAARDMDSIRQALGQKQITYYGFSYGTYLGQVYSTLFPGHVRRLIMDSNVDPRH
                     VWYTANLKQDIAFNRNVNIWFGWLAKYDNVYHLGATESAVQHRWYAEKARLAKHPILG
                     KVGPDEWTDIFLGAGYYEQTWLQLGSAFADWENTHSAKAAKNLVALYKGSDGLGNDNG
                     FAVYNAVQCTDVQWPLSWAKWNRDNTRINRIAPFETWGNAWFNAP"
BASE COUNT          211 a          348 c          312 g          154 t
ORIGIN      
        1 cccaagatca agatcgcggt ttcgcggatc aagcacacct ccagcgcgaa gaactaccag
       61 ggcgtgatcc tgacgaaccc gggcggcccc ggaggctccg ggctcaacct gaacgtcttc
      121 ttgatcgacg cgctcaaggc cgagcacctg agcgctgccg cagcggacta cgactggatc
      181 gggttcgacc ctcgcggcgt ggggtccagc gttccggcgc tgacctgtca gccgaactac
      241 ttcagccccg accggctccc ctacaacccg aaaaccaagg cgatcctgtc gtactggaag
      301 gcgcggtcgg cgaagtacgc tgctgcgtgc cagacgcaca gcgccgccca ggccgcgctg
      361 ctcaagaaca tgaccacggt ggatgccgcc agggacatgg acagcatccg gcaggcgctc
      421 ggccagaagc agatcactta ctacgggttc tcgtatggca cctatctagg ccaggtctac
      481 tcgacgctgt tccccggcca tgtccgccgc ctcatcatgg acagcaacgt cgacccgcgg
      541 catgtgtggt acacggccaa cctgaagcag gacatcgcct tcaaccggaa tgtcaacatc
      601 tggttcggct ggcttgccaa gtacgacaac gtctaccacc tgggcgcgac cgagagcgcg
      661 gtccagcacc ggtggtatgc ggagaaggcc aggcttgcca agcaccccat cctcggcaag
      721 gtcggcccgg acgagtggac cgacatcttc ctgggcgccg ggtactacga gcaaacctgg
      781 ctccagctcg gctccgcgtt cgccgattgg gagaacaccc acagcgccaa ggcggccaag
      841 aacctcgtcg cgctgtacaa gggctccgac gggctcggca acgacaacgg gttcgcggtg
      901 tacaacgcgg tgcagtgcac cgatgtgcaa tggccgctga gctgggccaa gtggaacagg
      961 gacaacacgc gcatcaaccg catcgcaccg ttcgagacct ggggcaacgc ctggttcaac
     1021 gcgcc
//
LOCUS       DASRPQ010000106         2514 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3150670, whole genome shotgun sequence.
ACCESSION   DASRPQ010000106 DASRPQ010000000
VERSION     DASRPQ010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2514
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3150670"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(308..1270)
                     /locus_tag="VFD73_01250"
     CDS             complement(308..1270)
                     /locus_tag="VFD73_01250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72657.1"
                     /translation="MCLIRASCCWAAFFLLSPPPLAAQGSDTRNVAVQMRHVDFHVDS
                     TIVLRIEFLRGDLEPTSPDHAPYFDDKTSFNIKIDSAQVRIAPEQLGYLLNRYTFAYP
                     GSPLRHLSVSVEKGQLKQEGTLKGVSFTMLGDLSLTSSGELRLHPTSVKAIGMKVGGL
                     MKFLGLNLEKLVKVRGARGVRIDKNDFFLDPAGLLPPPLVRGRVVATELTDSAVSLTF
                     HPADSSKVKELAVPNPKVTNYMYYRGNVLRFGKLTMRDTDLLIEDANPDDPFDFFLDH
                     YLAQLVAGYSRTRPDQGLTVVMQDFAKTPELPARKTENRQRTPS"
     gene            complement(1584..>2514)
                     /locus_tag="VFD73_01255"
     CDS             complement(1584..>2514)
                     /locus_tag="VFD73_01255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HZI72658.1"
                     /translation="GDWVDPTGETRDVTVRLAPEARERTVDLERLPLVIPGPTGAPVT
                     LPLGQVASIRQALGPAQINHLNREAVVNVQANVQGRSLTEVTGDINAKLAGLEKQLPP
                     GYRITQGGEARDQAEVFTRIFTALGAAVLLMYLILVIQFGSFLDPLAILISLPLSLIG
                     VVLALLVTHDTLNIMSLIGVILLMGIVAKNAILLIDFAKWSHERGTPLREALIEAGRI
                     RLRPIMMTTIALIAGMIPVALGRGEGADFRAPLGRAVIGGVITSTLLTLLVIPTVYEI
                     LDGFRSWLMAKAFRRVFRGHPEPAAGTQAGGVD"
BASE COUNT          484 a          784 c          780 g          466 t
ORIGIN      
        1 agttggtgtc gctggtcggc agcatccggc gtatcccgcc gaaccacccg gatgcccggg
       61 tgcgccgcat tgaaccgggt tagctggcgg ttcagcacct cggcttccgc gccgagggag
      121 ctacccggga aggttacgac aaccggcccg ccctctgagt gcccagcaca cccaaccgag
      181 agcagggcaa tcgctagggt gagccgccgg tcaggcaccg gcgcgcccaa gcacaagagg
      241 atgagaagag gtacgccgcc gggcaggatt catcagaggg tattctggcg cggcccgaac
      301 gatcgcgcta ggagggagtc ctttgtctat tctccgtctt tcgcgccggc aactccggcg
      361 tcttggcgaa gtcctgcatc acgacggtga ggccctgatc gggtcgggtt ctggagtagc
      421 cggccacgag ttgggctagg tagtggtcca ggaaaaagtc gaacgggtca tccgggttcg
      481 cgtcctcgat caacagatca gtgtcccgca tggtgagttt cccgaaccgc agcacgttgc
      541 ctcgatagta catgtagttc gtgaccttgg gattcggcac cgcgagctct ttaactttac
      601 tgctgtcggc tggatggaag gtgagggaga ctgcgctgtc ggtcagctcc gttgccacca
      661 cgcgccctct caccagtggt ggtggcagga ggccggcagg atccagaaaa aaatcgttct
      721 tgtcgattcg cacgccccgg gctccccgca ccttcaccag cttctccagg ttgagcccca
      781 ggaacttcat caggccaccc accttcatcc cgatcgcctt cactgaagtg ggatggagcc
      841 gcagttcccc gctggacgtg aggctcagat caccgagcat ggtgaaggac actcctttca
      901 aggtgccctc ctgcttgagc tggcccttct cgacactcac gctcaggtgc cgaagcggcg
      961 atcctgggta ggcgaaggtg taacggttca acagatagcc gagttgctcc ggagcgatcc
     1021 tcacctgggc cgagtcgatc ttgatattga aggaggtctt atcgtcgaag tagggcgcgt
     1081 ggtccgggga ggtaggctcg agatctccgc ggagaaattc gatgcgcaag acgatggtcg
     1141 aatcgacgtg gaagtcgacg tgccgcatct ggacggcgac gttgcgggta tcgctgcctt
     1201 gagcagccag gggcggcggg gagagtaaga agaatgctgc ccaacagcag ctagcccgga
     1261 tcaggcacat cgctcctcat tatagatcca ctacagaatc tacgttgtag gtgcttcggg
     1321 tgagtctcgt cctttcggcc actgaggagc gccggagcta tcgagatccc aacaaccgaa
     1381 cagagcgccc cacgtggcct gcaggacgag actcaccctc agcaagacac acgaacgggg
     1441 ctccgttact cctcagaacg cgggcctggt ttgccccagg gacaggcgag agcttagtcg
     1501 ctttgactcg tgacccgtga ctcgtgactc gtgacccgtg actcgtgact cgcgactttc
     1561 gactttcgac tttcagccct cgactagtcc actccacccg cctgcgttcc tgccgcgggc
     1621 tccggatgtc ctcgaaacac ccgtcggaac gcctttgcca tgagccagga ccggaatcca
     1681 tccagaatct cgtagaccgt cggaatcacg agcagggtca ggagcgtaga cgtgatcacc
     1741 ccgccgataa ccgctcgtcc caatggtgcc cggaagtcgg cgccttcgcc ccggcccagc
     1801 gcaacgggaa tcataccggc aatcagggcg atggtcgtca tcatgatggg acgcagccgg
     1861 attcttcccg cctcgatcag cgcctcccgc agcggcgtcc cccgctcgtg cgaccacttg
     1921 gcaaagtcga tcagcagaat ggcattcttt gccacgatgc ccatcagcag aatgaccccg
     1981 atcaggctca tgatgttgag cgtgtcgtgg gtgaccaaga gggccaatac gacgccgatg
     2041 agcgaaaggg ggagcgagat caggatcgcc agcggatcga ggaacgagcc gaactgaatg
     2101 accaggatca ggtacatgag cagaacggcc gcgccgaggg cggtgaagat ccgggtgaag
     2161 acctcagcct ggtcccgcgc ttccccgccc tgagtgattc ggtatccagg aggcagctgc
     2221 ttttcgaggc cggccaactt ggcgttgatg tcgccagtca cttccgtgag ggaccgtccc
     2281 tgcacgttgg cctgtacgtt cactaccgcc tcgcggttca ggtggttgat ctgcgccggc
     2341 ccgagcgcct ggcggatgga tgccacctgc cccagtggaa gcgtcaccgg tgcccctgtt
     2401 gggccgggaa tgacgagtgg cagccgctcc aaatccaccg ttctctcccg agcctccggc
     2461 gcgagccgga cggtcacatc ccgggtctcg ccggtgggat cgacccagtc accc
//
LOCUS       DASRPQ010000107         2623 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1893709, whole genome shotgun sequence.
ACCESSION   DASRPQ010000107 DASRPQ010000000
VERSION     DASRPQ010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2623
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1893709"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..272)
                     /locus_tag="VFD73_01260"
     CDS             complement(<1..272)
                     /locus_tag="VFD73_01260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72659.1"
                     /translation="MATVRIPEENRSLTEQHDVTDYLAKLGIDYERWPVSERVPEHAS
                     ADEVLEAYRPEIDQLKARGGYVTADIIDVTAETPGLEAMLAKFKTE"
     gene            complement(260..880)
                     /gene="mtnB"
                     /locus_tag="VFD73_01265"
     CDS             complement(260..880)
                     /gene="mtnB"
                     /locus_tag="VFD73_01265"
                     /EC_number="4.2.1.109"
                     /inference="COORDINATES: protein motif:HMM:TIGR03328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016835 - carbon-oxygen lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylthioribulose 1-phosphate dehydratase"
                     /protein_id="HZI72660.1"
                     /translation="MIFAEVAPQLAEIARQCCARGWALATSGNFSAVVNRSPLRLAIT
                     PTGADKAGLTSDDILEIDDRGTVLRGSGRPSAETSLHLAIARSRGAGAVLHTHSVWST
                     ILSEGTTGQGVAIEGYEMLKGLDGVATHQHREWLPLLENRQDWAAAVPELEALLTQHP
                     DAHGFLIRRHGLYTWGQDLAGAKHQLEALEFLFEVMGRKRGMTWQP"
     gene            930..1931
                     /locus_tag="VFD73_01270"
     CDS             930..1931
                     /locus_tag="VFD73_01270"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HZI72661.1"
                     /translation="MRAPTTHSRGGFIHLDPLLSLASFGVGIVVGLTGMGGGALMTPV
                     LVLFFAVPPLTAVSSDLVASAVMKPVGSFVHLRRGTVHLGLVKWLCIGSIPGAFSGVI
                     IARSLGRGQQVQDIIRFALAVALLLAAIGLIIRAYIRLVERARRRDGRATPLPQGPPS
                     VRLRPLPTVLVGVLGGLVVGLTSVGSGSLIIIALMVLYPLLTANELVGTDLVQAVPLV
                     ASAALGHLLFGDFKMEITTSLLLGSIPGVWIGAHLSAQAPGGLVRRALAFVLLASSLK
                     LFNLSNGTTGLVLAVVLVFAPVLWMLVRRHYGFPALARRGSGPAAGPSGPQRKATSE"
     gene            complement(2005..>2623)
                     /locus_tag="VFD73_01275"
     CDS             complement(2005..>2623)
                     /locus_tag="VFD73_01275"
                     /inference="COORDINATES: protein motif:HMM:NF018436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1206 domain-containing protein"
                     /protein_id="HZI72662.1"
                     /translation="AFLVLIALGFFGYAAWRLVEAVLDPGRRGTDWKALATRAGFAIR
                     GLIHGAFGITALRMTAGRHSGGGNQAQHWAARSLELPAGGLLVGAAGLAIAGYGVYQL
                     YRAWAAKLGTQLRLGQAPAGLRPWIVGISRFGIAARGLVFCLIGWFLAQAGLRHDAGE
                     AAGLRESLRAVAEMGRWPFAAVAIGLAAYGVYELVNARYRTIRVQ"
BASE COUNT          422 a          877 c          822 g          502 t
ORIGIN      
        1 tgctccgtct tgaacttggc cagcatggcc tcgaggcctg gcgtctccgc ggtcacgtcg
       61 atgatatcgg cggtgacata gccgccacgc gccttgagct gatcgatctc cggtcgatac
      121 gcctcgagca cctcgtcggc ggaggcgtgt tcgggcaccc gctcggatac cggccaacgc
      181 tcgtagtcga tacccagctt tgccaggtag tcggtgacgt catgctgctc ggtcaggctg
      241 cggttttctt cggggattct cacggttgcc atgtcatgcc tcgctttcgg cccatcactt
      301 cgaacaagaa ctccaaagct tccagttggt gtttggctcc ggccaggtcc tgaccccagg
      361 tgtagagccc atgccggcgg atcagaaagc cgtgggcgtc gggatgctgg gtcagcaatg
      421 cctccagctc gggcactgct gcggcccaat cctgccggtt ctccagcagc ggcagccact
      481 cgcggtgctg atgggtcgcg accccatcca gtcccttcag catctcgtag ccttcgatgg
      541 ccacgccctg accggtggtc ccttccgaga gaattgtgct ccaaaccgag tgggtatgca
      601 acaccgcgcc agcaccgcgg gagcgggcaa tggcgagatg gagactggtt tccgccgagg
      661 ggcggcccga cccgcgcagg acagtgccgc ggtcgtcgat ctcgaggatg tcatccgagg
      721 tcaggccggc tttgtccgct ccggtgggag ttatcgcgag acgcagggga ctccggttca
      781 ccacggcgct gaagttgcca ctcgttgcca aggcccagcc gcgagcgcag cactgacggg
      841 caatctcggc gagctgggga gcaacttcag cgaagatcat gatcaagaat accgagagcg
      901 gtggtcattt gtagctcgac cgcctactct tgagggcccc gacgacccac tctcgtggag
      961 gtttcattca cctcgatccg ctgctctccc ttgcctcgtt cggcgtcggc atcgtagtgg
     1021 ggttgaccgg gatgggcggg ggagcgctca tgacaccggt gctcgtgctg ttcttcgctg
     1081 tgccgccgct taccgctgtg tcttccgacc tcgtcgctag cgccgtcatg aagccggtag
     1141 gatcgttcgt tcatctccgc cgtggcaccg tgcacctggg gttggtgaag tggctctgca
     1201 tcggatcgat tccgggcgca ttcagcgggg tcatcatcgc gcgctcgctc ggcagaggac
     1261 aacaggtgca ggacatcatt cggtttgccc tcgcggtcgc tctgttgctc gcggccatcg
     1321 ggctcatcat ccgggcctac attcgcctgg tcgagcgggc tcgccgtcgc gatggccggg
     1381 cgaccccgct tccccagggt ccaccctcgg tacgtctgcg cccgcttcca acggtcctcg
     1441 ttggtgtgct tgggggactg gtggtcggtt tgacctcggt cggctcggga tcgctcatca
     1501 ttatagcgct gatggtgctc tacccgctgc ttaccgccaa cgagctggtc ggcaccgacc
     1561 tcgtccaggc ggtgccgctg gttgcctcag ccgcgctggg tcaccttctg ttcggcgact
     1621 tcaaaatgga gatcaccacg tcgctgctgc tgggctcgat tcctggcgtc tggatcggcg
     1681 cccatctctc ggcccaggcc ccaggcggac tggtgcgccg tgcgctcgcc tttgtgttgc
     1741 tcgcgtcctc gctcaagctc ttcaacctgt cgaacggaac taccgggtta gtgctggcgg
     1801 tcgtcctggt atttgccccg gtactctgga tgctggtccg ccggcactac gggtttcctg
     1861 cacttgcccg ccgcggtagc ggaccggctg ctggcccttc gggtccgcag agaaaggcga
     1921 catcggaata aaagaattca ccacaaggca cagaggacac ggagggtggt gaatttgaag
     1981 taaacagaaa cccttccgca gcacttactg gacgcggatg gtgcggtagc gggcgttgac
     2041 cagctcatag acgccgtacg cggccaggcc gatcgcgacc gcggcaaagg gccagcggcc
     2101 catctccgct acagctcgga gcgattcgcg aagcccggcg gcttccccag catcgtgccg
     2161 aagccctgcc tgggcgagaa accagccgat caaacagaag accagtcccc gtgccgcaat
     2221 tccgaagcgg ctgatcccaa cgatccatgg ccgcagcccc gcaggcgcct gacccaatcg
     2281 aagttgcgtt cccagctttg cggcccacgc gcgatacagc tgatagacac cgtacccggc
     2341 gatcgccagg ccggccgcgc caacgaggag cccaccggcc ggcagctcca ggctccgggc
     2401 cgcccagtgc tgcgcctggt tgccgccacc actatgccgc ccggcggtca tccggagcgc
     2461 ggtgatgccg aatgccccgt gtatcagtcc ccgaatcgcg aaccccgcgc gagtggccaa
     2521 ggccttccag tccgtgcccc tgcgcccagg atcgagcact gcctcgacca acctccaggc
     2581 cgcgtagccg aagaagccga gggcgatcaa caccaggaat gcg
//
LOCUS       DASRPQ010000108         1239 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1264508, whole genome shotgun sequence.
ACCESSION   DASRPQ010000108 DASRPQ010000000
VERSION     DASRPQ010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1264508"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            425..808
                     /locus_tag="VFD73_01280"
     CDS             425..808
                     /locus_tag="VFD73_01280"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HZI72663.1"
                     /translation="MSFLEVSVEAGDLGPVIVLAGDADGSSVTQLNEALTAQVSARAT
                     HLTINATNLRSIDPATAQTLMLAALIITVQGGSTVLVNPQEPVLKMLNHTRIAEMFTI
                     QSQTPAETAPDTSAANEREETRTYD"
BASE COUNT          278 a          421 c          380 g          160 t
ORIGIN      
        1 aaacccggcg cggtcccggc cgatactcag ctgacagcaa cggtgacagc aacagcagcg
       61 accaacggca agcaacggcg accggcgacg tcgtgtccgc ggacggcatc cgctcccacc
      121 tgaccggcat caagccgccg acggagcctg gccctggcgt cgagtgagcg ctcgcagcct
      181 agccgcatag cacgacccgg ggacgctcgg cggcacaatg ccgctggacg tcttcgcgtc
      241 tctgacctgg agatcctgcg ggcctgacgg caagggccag gcccgaacag cgcgcgacga
      301 accttctcgc ctgtgagaac gggcaacgcc tacatcccta cccgagagat cacccagcac
      361 aggtcccggc taccgtataa aataatctta aatttcacta agaaggtggc gaagaggtgg
      421 ccttgtgagc ttcctggaag tatccgtgga ggccggggac ctcggcccgg tcatcgtcct
      481 ggctggcgac gcagacggct catccgtcac gcaactgaac gaagcactca ctgcccaggt
      541 atcagcccgg gccacgcacc tgaccatcaa cgcaacgaac ctgcgctcca tcgacccggc
      601 aacggcccag acactgatgc tggccgcact gatcatcacg gtccagggcg gcagcacggt
      661 gctggtgaac ccgcaggagc ccgtactcaa gatgctgaac cacacacgca tagccgagat
      721 gttcacgatc caaagccaga caccagccga gaccgcaccg gacaccagcg ccgccaatga
      781 gcgagaggag acccgtacct atgactgacc acgagcacaa gccccggact ggtcaatcac
      841 gctccggcgc cagccagcca gtctcagcac cggcacgcag aaggcgacac cagcacgttc
      901 gaaatcgcct gccgcgagtg cggtgatgag cccgcgctgg gtcatcggga ggtctcagcg
      961 gagctgcagc agatccgcgg accctacacg ctcagcactg gcatcgccgc gttcaccagg
     1021 cacaacgagt tccacaaggc cgaagggcgc gcggcgaagc tgccgatcgg gactgtaatt
     1081 tcaatggtgt aactcctgag acggaaggag acaccagtga ccgacgtgac acagaaccag
     1141 gatcgggccg agacggagct ctccgcggct gatgagcagg tgctgcgcga gctgaccgag
     1201 cgggcccgta ccggcgggct gaagctgacc ggcgagggc
//
LOCUS       DASRPQ010000109         1152 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1264606, whole genome shotgun sequence.
ACCESSION   DASRPQ010000109 DASRPQ010000000
VERSION     DASRPQ010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1152
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1264606"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..524)
                     /locus_tag="VFD73_01285"
     CDS             complement(<1..524)
                     /locus_tag="VFD73_01285"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF015753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HZI72664.1"
                     /translation="MSSTAAGWLQFGLLVAALAACYVPLGNYIARVFTAKEHWRAERG
                     IYKLCGIDPEADMRWGVYARSLLAFSLVSVLFLYLIQRTQQWLFLSAGMSNVSPVTAW
                     NTAASFTTNTNWQNYSGESTMGYLTQMAGLAVQNFGSAAVGLAIAIALIRGFTRSRTD
                     KLGNFWVDLTRGTIR"
     gene            complement(885..>1152)
                     /locus_tag="VFD73_01290"
     CDS             complement(885..>1152)
                     /locus_tag="VFD73_01290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72665.1"
                     /translation="WILYSGSSAHTFFCGNPARGSSSEMIISCVVPAPDGATRREAAE
                     DTIAGTAVLALAELPAGLPLVVIRNPTSTSRHITNIADQASRPT"
BASE COUNT          226 a          360 c          385 g          181 t
ORIGIN      
        1 cggatcgtcc cccgggtcag gtccacccag aagttgccga gcttgtcggt ccgggaccgg
       61 gtgaacccgc ggatcagcgc gatcgcgatg gccaggccga ccgcggccga gccgaagttc
      121 tgcaccgcga gcccggccat ctgggtcagg tagcccatgg tggactcgcc ggagtagttc
      181 tgccagttgg tgttggtggt gaacgaggcg gcggtgttcc acgcggtgac cggcgagacg
      241 ttggacatcc cggcggacag gaacagccac tgctgggtcc gctggatcag gtacaggaac
      301 agcacgctga cgagcgagaa cgcgagcagg gagcgggcgt acacgcccca ccgcatgtcc
      361 gcttccgggt cgatcccgca cagcttgtag atgccgcgct cggcccgcca gtgctccttg
      421 gcggtgaaga cgcgcgcgat gtagttgccc agcggcacgt agcacgcggc cagcgcggcc
      481 acgagcagcc cgaactgcag ccagcctgcg gcggtgctgc tcatcagaac ctctcaggga
      541 gaatcagggc cacgaacagg tagatcgtca gcaagatgcc gccgatcagc ccgatccagt
      601 tctcagcgct caaagcgctc gacccccttc aaaatgagga ggagcacggc gaagacgacg
      661 atcgtcagcc cgacatacag caggtccgac acagtgactc ctagtgatgc gatgcttgcc
      721 cggcatacgg aagccgcagg cagatcacag ttaacgccag gaatcaccca ggaatagcag
      781 cccttgcagc atccatgcgc tcgcggccgg attcctaaca gaacccatgc gggcggacct
      841 ggggtctgtc ttggcaggta tcccagcagt ggcctagggt cgtgtcaggt gggccgggaa
      901 gcctggtcgg cgatgttcgt gatatggcga ctcgtggacg tcggattcct gatgactacc
      961 aatggcagac cggcaggcag ctcggccaga gcgagcacgg cagtgcccgc gatcgtatct
     1021 tccgctgcct cgcggcgcgt ggcgccgtcc ggtgccggta ccacgcagct gattatcatc
     1081 tcggagctgc tgccgcgagc gggattaccg cagaagaagg tgtgggcaga tgacccgcta
     1141 tacagaatcc ag
//
LOCUS       DASRPQ010000110         1112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2204477, whole genome shotgun sequence.
ACCESSION   DASRPQ010000110 DASRPQ010000000
VERSION     DASRPQ010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2204477"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..973)
                     /locus_tag="VFD73_01295"
     CDS             complement(<1..973)
                     /locus_tag="VFD73_01295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72666.1"
                     /translation="MVSTWLGVVLVVLIACGLTAFTYLGLERAGRRAWPAMVFRAVAW
                     AALGLLLLDLSCAVHRPAGRPLVLLDASLSLSAPGGQWRAARDSALRWGEVRTFGDER
                     VMTDTVPSRGRSLLAPALIAASASDRPVVVVTDGEIEDLPDIPADILARSGVRLFARS
                     PISDLAISAVTGPDRVSAGDSIPLDIQVQATAGVGRDTIPVEVIAGGKRLGRRTVRLR
                     GGSVARVHLQVPTTGLAPGDQVLHIQLAGNKDAEPRTDTRLHLVTVAPTPGVVFLAGP
                     ADWDSRFLFTTLREVAQLPVRGYVRLEPNRWRSMTNLQPASAAEVRRA"
BASE COUNT          222 a          370 c          362 g          158 t
ORIGIN      
        1 ccgcgcgccg gacctcggcc gctgaggcag gctgcaagtt ggtcatcgag cgccagcggt
       61 tgggctccag acgtacgtag ccacggacgg ggagctgagc gacttctcgc agggtcgtaa
      121 agaggaagcg gctgtcccaa tcggcggggc ctgccaggaa caccacaccc ggtgtgggcg
      181 ccaccgtcac cagatgcaac cgggtgtcgg tacggggctc cgcgtctttg ttgccggcca
      241 gctgtatgtg gaggacctga tctccgggtg ccagtcctgt cgtaggtacc tgcaggtgca
      301 ctcgagcaac ggatccacca cggaggcgaa cggttcgccg accgagtcgc ttccctccgg
      361 cgatcacctc taccggtatc gtatctcttc caacgcccgc tgtcgcctgg acctgaatgt
      421 cgagcggaat cgaatcgccg gcgctcaccc ggtccggacc ggtcacagcg ctaattgcca
      481 aatcggaaat gggcgatcga gcaaacaggc ggactccgct gcgcgccagg atgtcggcag
      541 gaatgtcggg caggtcctcg atttcaccat cagttactac cacgaccggg cgatcagagg
      601 cggatgctgc gatgagcgca ggggccagca gcgatcgtcc gcgactcggc accgtgtcgg
      661 tcatcacccg ttcatcgccg aacgtccgaa cttcgcccca gcgaagggca gaatcgcggg
      721 cggcacgcca ctggccgccc ggtgcgctca ggctgaggga agcatccagc agcacgagtg
      781 ggcgcccggc tggacggtgc actgcgcagc tcaggtcgag caggagcagt ccgagcgcag
      841 cccacgcaac cgctcgaaac accatagcgg gccacgctcg gcgaccggcg cgctccagcc
      901 ccaggtaggt aaaggctgtc agaccacaag cgatcaggac gacgagcacc acgcccagcc
      961 atgtactcac caatgcagcg ctccggatgg gtcagctcgg ctgaatgcac cgggggcgcg
     1021 cccggcgcaa tcaccgctgg ggaagagacc cacgccacga agacacatca tgtcagctga
     1081 aaggaggcca ctacaagggc gctacggcaa cc
//
LOCUS       DASRPQ010000111         1452 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_323979, whole genome shotgun sequence.
ACCESSION   DASRPQ010000111 DASRPQ010000000
VERSION     DASRPQ010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1452
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_323979"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..331
                     /locus_tag="VFD73_01300"
     CDS             <1..331
                     /locus_tag="VFD73_01300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72667.1"
                     /translation="LALPEFDPYYSVASWYRDYAAYCGVSDDGKKLFAVVFQIGRRKP
                     ILKKALGEAGGDDAPDSECPAPGWERRPVRVTFEPDETRKSTYAVRGHAADLLTDDDG
                     EEEKASQ"
     gene            complement(701..>1452)
                     /locus_tag="VFD73_01305"
     CDS             complement(701..>1452)
                     /locus_tag="VFD73_01305"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HZI72668.1"
                     /translation="RPLARMAMVGVLLLVGGNLTLAYAERYVASGLAALIIAVTPLWF
                     LVLDSLLLGDHHIALRGKVGLGMGVAGLLVLLWPDLSATTTLGRVQFWASLSLVGGSF
                     SWALGSVLAKKWKSSAVDPFSATAWQMIAAGLANLLIAFALDDTSRTVWTARGIAATL
                     YLVVFGSWVGYTAYIWLLGHVPTSKVSTYAYVNPVVAVFLGWLVLHERVTGFILSGSA
                     IVVASVALVTSAPVTAKAALQEMPAVETMGD"
BASE COUNT          304 a          469 c          445 g          234 t
ORIGIN      
        1 tctcgccctg cctgaattcg atccctacta ttcggtggcc agctggtatc gcgactacgc
       61 cgcctattgc ggcgtctccg atgacggcaa aaaactcttt gccgtcgtct tccagatcgg
      121 acgccgcaag ccgatcctga agaaagctct cggagaggcc ggtggcgacg acgcgcccga
      181 ttcggagtgc ccggcgccgg gttgggagcg gcgtccggtg cgggtcactt tcgagcctga
      241 tgaaacccgc aaatccacgt acgccgtgcg cggacatgcg gcggaccttt tgaccgacga
      301 cgacggggag gaggaaaagg cttcgcagta aacaaagcgt ggagggtacg acttcagtct
      361 tgctatcagc tgcgatcgat cctttgccct cgcgcaggcg aacaacaggt ccctccactc
      421 cgctcgctgc gctctgctac ggttgggatg acagggagac ggatgtgggt cgtggctgga
      481 ggcgggactg ggacggatct ctgcttgagg taggtgtatc ccgcgaacag aagcaccgtc
      541 gttccgacgg ccaaatctcc aggcacttgt agcgccggca tcttgccggc tggctcgggg
      601 gcatcctgcc cccgggggcg ggcaagatgc ccgcccgaca gccggcggga cgacggcgct
      661 acattcagat caaaagccga ctcgccatca tcgtacgtga ctagtcgccc atcgtctcta
      721 ccgccggcat ttcctgcaga gcggctttag ccgtcaccgg agcgctggtg acgagggcca
      781 ccgaggccac tacgatggcg ctgcccgaca ggatgaatcc ggttacgcgt tcatgcagca
      841 ccagccagcc cagaaacacc gccacgaccg gattgacata cgcgtaggtg gaaaccttcg
      901 aggtcggcac gtggccgagc agccaaatgt atgcggtgta tcccacccag gacccgaaaa
      961 ccaccaggta gagcgtggcc gcgattccgc gggcggtcca caccgttctc gaagtgtcgt
     1021 ccagggcaaa tgcgatgagc aggtttgcca gccctgccgc aatcatctgc caggcggtgg
     1081 cagagaaagg atcgaccgca gatgacttcc acttttttgc cagcaccgaa cccagcgccc
     1141 agctgaacga tccacccacc aggctcaggg aagcccagaa ctgaacccgc cccagggtgg
     1201 tggtggctga gagatcaggc cacaacaata ccaacagccc ggcaaccccc atgcccagtc
     1261 cgaccttgcc tcggagcgcg atgtgatgat cgcccagcag cagtgaatcc agcaccagaa
     1321 accagagcgg ggtcacggct atgatcaaag ccgccaggcc ggaggcgaca taacgttctg
     1381 cataagccag cgtgaggttg ccgcccacca gcagcaggac gcccaccatc gccatccgag
     1441 ccagcgggcg cg
//
LOCUS       DASRPQ010000112         1139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3776183, whole genome shotgun sequence.
ACCESSION   DASRPQ010000112 DASRPQ010000000
VERSION     DASRPQ010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3776183"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..692)
                     /locus_tag="VFD73_01310"
     CDS             complement(<1..692)
                     /locus_tag="VFD73_01310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI72669.1"
                     /translation="MIQLEDVTKVYRMGKVEVRALESVDLTIDDGELVAIMGPSGSGK
                     TTLMNILGCLDLPTAGRYLLDGSDVSRLSDNRLAKIRSRKIGFVFQSFNLVSRTSAIR
                     NVELPLVYAGVRARRNPARIALEQVGLGDRQKHFPNELSGGQQQRVAIARALINDPAL
                     LLADEPTGNLDTAASAEILKLLGALNDAGRTVVIITHEEEVSRFARRVVRMRDGRIVS
                     DQVQRSRTEVTA"
     gene            complement(950..>1139)
                     /locus_tag="VFD73_01315"
     CDS             complement(950..>1139)
                     /locus_tag="VFD73_01315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72670.1"
                     /translation="RELPWDRSTTGPIEPDRFRYEMVSVEHDHERRVVLGESEIPDAL
                     RPLLALLADQGQIRPASG"
BASE COUNT          218 a          388 c          325 g          208 t
ORIGIN      
        1 cacgcggtga cctccgtccg gctccgctgc acctgatcac tcacgatgcg cccatcgcgc
       61 atccgcacga cccgcctcgc gaaccgggag acctcctcct cgtgagtgat gatcacaact
      121 gtccgaccgg catcattgag cgccccgagc aatttcagaa tctccgcact ggcggcagtg
      181 tcgaggttgc cggtgggctc atcggcgagt agcaatgcgg gatcgttgat cagcgccctc
      241 gcgatcgcaa cccgctgctg ctgaccaccg gatagctcgt tggggaaatg cttctggcga
      301 tcacccaacc cgacttgttc cagcgcgata cgggccggat tacgccgggc gcgcaccccc
      361 gcgtaaacca gcggaagttc gacattacgg atcgcgctgg tgcgcgatac gaggttgaac
      421 gactggaaca cgaagccgat cttgcggctg cggatcttgg ccagccggtt gtcagacagc
      481 cggctgacat cgctgccgtc aagcagatag cgccccgcgg tgggcagatc cagacagccc
      541 aggatgttca tcagcgtggt cttgcccgat cccgacggcc ccatgatggc gaccaactca
      601 ccatcgtcga tagtcaggtc gacactttcg agtgcccgca cctcgacctt gcccatccga
      661 taaactttgg tgacgtcctc aagctggatc atgctggccc cccaataccc ctatgaccaa
      721 atacccctgt ggccaatacc cctgtgatga cccccgtgtc tatgggatcg cgcaggcaca
      781 cggcggccgg caggcgacat cgcgccaacc gtccgatcgt gaccatgagg cggataggga
      841 cgtcacccac cgtgcgcggt ccacactaga cgctaccgcg ttgtgctcgt cacggaaagt
      901 gctggagcag ctagcgcgcg atcttcaacc atgagtatgg gtttttcact caccctgaag
      961 ccgggcggat ctgtccttgg tcggcgagca atgccagcag cgggcgcagc gcatccggga
     1021 tctcactttc tcccagcacc acccgccgtt catggtcgtg ctcgacactg accatctcgt
     1081 agcggaagcg atccggctca atgggtcccg tagtagaccg atcccagggc agctcccgc
//
LOCUS       DASRPQ010000113         1893 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3459004, whole genome shotgun sequence.
ACCESSION   DASRPQ010000113 DASRPQ010000000
VERSION     DASRPQ010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1893
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3459004"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            102..590
                     /locus_tag="VFD73_01320"
     CDS             102..590
                     /locus_tag="VFD73_01320"
                     /inference="COORDINATES: protein motif:HMM:NF013798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macro domain-containing protein"
                     /protein_id="HZI72671.1"
                     /translation="MIVDDLALAQADAVLRPTDQTLSALTETISRLDQQAGPRFAEQR
                     RLSSPLKAGSAVVTGSGALSAPFVLHAVIRDEESAVGRDVVRRALVSAWQRANDWELK
                     IIASPLVGAGAGQLSPEEAAALLVQTFPSNDSDGFPAVLRIVLEADADRQAVESILRR
                     TV"
     gene            587..1345
                     /locus_tag="VFD73_01325"
     CDS             587..1345
                     /locus_tag="VFD73_01325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI72672.1"
                     /translation="MIRLAHLTKRYGKFTAVDGIDLVVPSGELFGFLGPNGAGKTTTF
                     RMIAGILRPTSGSVEIGGIDISRRPLEAKARLGFIPDRPFVYDKLTGGEFLRFAAALY
                     GQQGPMVERRIDELLELFELSRWKDELTESYSHGMRQKLIISGALVHRPEVIVVDEPM
                     VGLDPRSARLLKDLFRQFVDRGGTVLMSTHTLEVAESMCDRIAIIHGGRIAVHGTMAE
                     VQEQTASEDLGLEDLFLKLTGGMLTHQLDSILDG"
     gene            1349..>1893
                     /locus_tag="VFD73_01330"
     CDS             1349..>1893
                     /locus_tag="VFD73_01330"
                     /inference="COORDINATES: protein motif:HMM:NF028259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72673.1"
                     /translation="MSGSPAVRPSLWTVLTPKWRSMLGRLRQEQSGVGRALLLGFVAV
                     LFWSAVFGVAYRVLDYFRGVEDIGNLMAAKILDVILLGFLSILLLSNIITALSTFFLA
                     KDLDLLVAAPIGRSRFYLAKLAETVVHSSWMVGLLALPIFTAYGIVYHGGPLYPLVAL
                     AAFVPYLVLPAVVGTAITMVLV"
BASE COUNT          299 a          590 c          607 g          397 t
ORIGIN      
        1 acctatcact tgatgggaag agtgctggac cggatgtgcc tgccggagca ggcccaggag
       61 atgtatcggc gcgggcgcga gctcgccggc ttgtgatcga ggtgatcgtc gacgacctgg
      121 ctctcgcgca agccgatgca gtccttcgcc cgaccgatca gaccctcagt gccctcaccg
      181 agaccatctc ccgcttagat caacaggcgg gcccgcgatt tgccgagcaa cggcggctgt
      241 cttctccact caaggcaggc tccgcggtgg tcaccggcag cggagcactg tcggccccat
      301 tcgtgctcca tgccgtcatt cgggacgagg agtcggcggt tggccgtgac gttgtccggc
      361 gagcgctcgt ctccgcctgg cagcgcgcga atgattggga gttgaagatc atcgcctcgc
      421 cactggtcgg ggctggagct ggtcagctga gtccggagga agccgccgcc ttgctggtac
      481 aaaccttccc ctcgaacgat tcagatggtt ttcccgcggt gctgcggatc gtgctcgaag
      541 ccgatgccga ccgccaggcc gtggagtcca ttctccggag gaccgtttga ttcgactcgc
      601 gcacctcacc aagcgctacg gcaagttcac ggcggtcgac ggcatcgatc tggtggttcc
      661 gagtggcgag ctgttcggct ttctcggccc caacggtgcc gggaagacga ccaccttccg
      721 gatgatcgcc ggtatcctgc ggccgaccag cggcagcgtc gaaatcggtg gcatcgacat
      781 cagccggcgt ccgctggaag ccaaggcacg gctgggcttc atccccgacc gcccgttcgt
      841 gtacgacaag ctgaccggag gcgagttcct ccggtttgcc gcggcgttat acggacagca
      901 aggtcccatg gtcgagcgga gaatcgatga gctgctggaa ctcttcgagc tgagccgctg
      961 gaaggatgag cttaccgaat cctacagcca cggaatgcgg cagaagttga tcatctccgg
     1021 tgccctggtg catcgcccgg aggtgatcgt agtggacgag ccgatggtcg gtctcgaccc
     1081 gcgcagcgcg cgcctgctca aggatctgtt ccgccagttc gtcgatcgtg gcggcaccgt
     1141 gctcatgagc acgcacacgc tggaggtggc ggagagcatg tgcgaccgca tcgccatcat
     1201 tcatggtggc cgcatcgcgg tgcatgggac catggccgaa gtgcaggaac agaccgcctc
     1261 cgaggacctg ggtctggaag atctcttcct caagctgacc ggtgggatgc tgactcacca
     1321 gctcgattcc attctcgacg gctgaccggt gagcggatct ccggcggtcc ggcccagcct
     1381 ttggaccgtg ctgacgccca agtggcgaag catgctcggg cgcctgcggc aggagcagag
     1441 cggcgtgggc cgtgcgcttc tgctgggctt tgtcgccgtt cttttctgga gcgcggtttt
     1501 cggcgtcgcc tatcgggtgc tggactactt ccggggggtg gaggacatcg ggaatctgat
     1561 ggccgccaag atcctcgatg tgattctgct ggggtttctc tccattctac tcctctccaa
     1621 catcatcacc gcgctctcta cgttcttcct cgccaaagac cttgatctcc tggtggcagc
     1681 cccgattggg cgctcccgct tttatctcgc caagctggcc gagaccgtag tccattcctc
     1741 atggatggtg ggactgttgg cgcttccgat ttttacggcg tacgggatcg tgtatcacgg
     1801 tggccctctg tacccgctgg tcgctctggc ggcgttcgtt ccctatctgg ttcttcccgc
     1861 cgttgttggc accgccatta cgatggtgct ggt
//
LOCUS       DASRPQ010000114         1169 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2831866, whole genome shotgun sequence.
ACCESSION   DASRPQ010000114 DASRPQ010000000
VERSION     DASRPQ010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1169
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2831866"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..813)
                     /locus_tag="VFD73_01335"
     CDS             complement(<1..813)
                     /locus_tag="VFD73_01335"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HZI72674.1"
                     /translation="MFAPWNARENWRAGISSWRGSIPEEVGVERGNARRLAGILRDHG
                     LDGEPVGVDVVELPVLRALEAEGLNITDGHGFMQNIRAIKTADEIALLDHSAALVDGA
                     YDELYRYLRAGIRENACVALVTRYLYENGSEEVEAVNSISGERCSPHPHVFSDRLIRP
                     GDTAYFDIIHSFNGYRTCYYRTLNVGSADRQQRAAYRRAREFMDNAIAEIRPGATSAD
                     VVRHFPAATEFGFADEEEAFGLQYCHGLGLSNWERPLMSRYHSFEHPVELKEG"
BASE COUNT          217 a          422 c          313 g          217 t
ORIGIN      
        1 gccttccttc agctcgaccg gatgctcgaa cgagtggtag cggctcatca gcggccgttc
       61 ccagttcgac aggcccaggc cgtggcagta ttgcagcccg aacgcctctt cctcgtcggc
      121 gaaaccgaac tccgtggcgg cggggaaatg gcgcaccacg tcggccgagg tcgccccggg
      181 ccggatctcg gcgatcgcgt tgtccatgaa ctccctggcg cgccggtatg cggcacgctg
      241 ctgccggtcc gcgctaccca cgttgagcgt ccggtaatag caggtccggt acccgttgaa
      301 tgagtggata atgtcaaagt acgcggtgtc accgggccgg atcagccgat ccgaaaacac
      361 atgcgggtgc gggctgcacc gctcaccgga aatcgagttg accgcctcga cctcctccga
      421 gccgttctcg taaagataac gggtcaccag cgcgacgcag gcgttctccc tgatgcctgc
      481 gcgcaggtaa cggtacagct cgtcgtaggc gccgtccacg agtgcggcag aatggtcgag
      541 cagggcaatc tcgtcagcag tcttgatggc cctgatattc tgcatgaacc cgtgcccgtc
      601 ggtgatgttc aggccctccg cctccagcgc gcgcagcacc ggcagttcca ccacatccac
      661 cccgaccggc tcaccgtcca gcccgtgatc ccgcaggatc ccggccagtc gccgggcatt
      721 cccccgctcc acccccacct cttccggaat ggacccccgc cagctggaaa tccccgcccg
      781 ccagttctcc ctcgcgttcc acggcgcgaa catctggtgc gtcctcgccg ccgacccgat
      841 atcccaaaga atcggctgct ccccccgcat caccaaacag caccgaaaca acttgtcccg
      901 cgcccagttc ccaatatgcg tagcggtggc atagcggatg ttgttcatgt caaaaagaat
      961 cagtgagcct atttctgaac ggtccagagc ctcctgaacc tttctcgtac gatcgactct
     1021 gagcctggca aagtcaaccc gctgctccca atcggtcccc agcgtcgccc ccggcgatgc
     1081 gatagccacg gactgcgccg tagcatcgta attctgaacc accactacct cctaggttcc
     1141 catcaccacg aaccacttct cgttttttt
//
LOCUS       DASRPQ010000115         1070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1265002, whole genome shotgun sequence.
ACCESSION   DASRPQ010000115 DASRPQ010000000
VERSION     DASRPQ010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1265002"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(119..517)
                     /locus_tag="VFD73_01340"
     CDS             complement(119..517)
                     /locus_tag="VFD73_01340"
                     /inference="COORDINATES: protein motif:HMM:NF016840.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI72675.1"
                     /translation="MFICWCPLPGSPLTTISGLVSHLRWVEYYWIRLVLIGEQDQMPV
                     TDDDPDAEMRLALSIPLARLLAEYRASCEQLRQLVAPLNLDTSSRGTMSWRTDPVTLR
                     WVLLHLIEETARHNGHIDILREMADGVTGR"
     gene            complement(822..962)
                     /locus_tag="VFD73_01345"
     CDS             complement(822..962)
                     /locus_tag="VFD73_01345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72676.1"
                     /translation="MEETDVAIVILKCLEEVPLLVSEGMRLYYPIGTSVSLDTNRNCP
                     FC"
BASE COUNT          225 a          316 c          318 g          211 t
ORIGIN      
        1 gcacccacgt cacatcgtgc cggtcccggg gctgccgggt tcgggacgct cactctgaga
       61 gagccacacc cttcccgcat cgacccctgc ggccggaagg cagtcagggg ccggggcctc
      121 accggccggt cacgccgtca gccatctccc tgaggatgtc gatatggccg ttgtgccgcg
      181 cggtctcctc gatcaagtga agcagcaccc atcgcagcgt gaccgggtcg gtccgccagc
      241 tcatcgtgcc ccgggatgaa gtgtccaggt tcagcggggc caccagctgc cgtagttgct
      301 cgcagctggc ccggtactcg gccaacagcc gcgcgagcgg gatgctcagt gccagtcgca
      361 tctccgcgtc ggggtcatcg tcggtgaccg gcatctggtc ctgctcgccg atcaggacta
      421 accggatcca gtaatactcc acccatcgca gatgactcac taggccggaa atggtggtca
      481 gcggcgagcc gggcagtggg caccagcaga tgaagatgct gtggaggcta tatggagatc
      541 atgtggagat aataaaaata gtctattaag aattgaatac agtcttctgg gatgcctttt
      601 ggttgacaca gttaagcgcc gaggtgatac tgagaaaata tccggcccgg aaaaggcgtt
      661 ttccgctctg ggcgggcacg gcgttctgtg ctatgactca aacatcctgg ccgcgactga
      721 tagcaagcgc cgctcggcgc ggcggcagga aatttgccaa aagggggttt ggtagtgaca
      781 catcttattc ttccgatcca gaaaatccgc ctttttagcg ttcagcagaa cggacagttc
      841 ctattcgtgt ccaacgacac agaggttccg atcgggtagt agaggcgcat cccttcggag
      901 acgaggagcg gaacttcttc caggcacttc aggatgacaa tggccacgtc cgtttcttcc
      961 acccttcaac gaacacgttc ctgttcgtgt ccaacgacct ggcaggccca gaccggatcg
     1021 tcgaagcaca ccctaatgcc gatgaggagc gcaacaagtt cgaagtcgat
//
LOCUS       DASRPQ010000116         1126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1894609, whole genome shotgun sequence.
ACCESSION   DASRPQ010000116 DASRPQ010000000
VERSION     DASRPQ010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1894609"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            518..721
                     /locus_tag="VFD73_01350"
     CDS             518..721
                     /locus_tag="VFD73_01350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72677.1"
                     /translation="MATPSKETLRGYWRLPIAAEPELRAHYRALARRQGLSVAVYVGL
                     LLRNHAARPFKLELLPAWRRDDA"
     gene            714..956
                     /locus_tag="VFD73_01355"
     CDS             714..956
                     /locus_tag="VFD73_01355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72678.1"
                     /translation="MHEMERLRQERLKKEQLERERLTPEQLEQERLEQEGLRPETEEE
                     YSERILGHLGCIGLVVLVGIGVGIAYVAWHFITKYW"
BASE COUNT          193 a          326 c          379 g          228 t
ORIGIN      
        1 ggccgttacg acatcaacgt cgcgccgagc accgcgtgga agatccacaa agcgattgcc
       61 ggctcccagt gggtcgtgtt cgagaagagc ggccacctgc cgtacttcga agagcccgcg
      121 gagttcgttc gcgtggtgga agggttcgtg gggtcgccgt agcgtgcgtt ggatcctccc
      181 cggtcgctcc gcgacagtcc cgccaggttg cctgggcgcg gtgcggacta ttcgcgtatc
      241 ttattatcct gctccgcgga ggggtggccg agtggtttaa ggcggcggtc ttgaaaatag
      301 gcttgggccc cgtctcgcct accatcgctg agcatcatcg agtgtcgttg agtgtgcgga
      361 gtctgccagt tacgcgggat cgttcctcgt gccctccctc gcctagtctc tgccagtccc
      421 cgcgagtctc attcgctgga aactacattc gagactacac gcgttcccgg ctaccggtag
      481 gtaggttggt acctaaggct tggggtaaga tgcgttcatg gcgacaccga gcaaagagac
      541 gttgaggggc tactggcggc ttcccatagc ggcagagcct gagctacgcg ctcactaccg
      601 cgcccttgcg agacgccaag ggctatcggt ggcggtctat gtcgggctgc tgctccgaaa
      661 ccatgctgcc cgacccttca agctggaact gctccccgcg tggagacgcg acgatgcatg
      721 agatggagcg gctgaggcag gagcggctga agaaggagca gctggagcga gagcggctga
      781 ctccagagca gttggagcaa gagcggttgg agcaagaggg gctcaggccg gaaacggaag
      841 aagagtatag cgagcggatc cttggccatc tcggctgtat cgggctggtg gtattggtgg
      901 gaatcggggt cggcattgcc tatgtggcct ggcacttcat caccaagtat tggtgagcca
      961 ccgctagaag ccccaggaga ggctttctct cccggggccg tggttgccct tcgctagtac
     1021 gtggatcacg tcctacgcgg tccgccgttg ggccacgcgc cttgcgtcct ccctcaccat
     1081 cgcctgagtc ggcttcgcgt agtgcgccgt cagctcgacc gtggag
//
LOCUS       DASRPQ010000117         1091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4086412, whole genome shotgun sequence.
ACCESSION   DASRPQ010000117 DASRPQ010000000
VERSION     DASRPQ010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4086412"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(8..205)
                     /locus_tag="VFD73_01360"
     CDS             complement(8..205)
                     /locus_tag="VFD73_01360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72679.1"
                     /translation="MSRNQGHRYTASRLGRNPIVAIAVGVVLLAIGFVVPGTTRDTVL
                     RVAGVLALLAGGVMLVARRRG"
     gene            complement(249..797)
                     /locus_tag="VFD73_01365"
     CDS             complement(249..797)
                     /locus_tag="VFD73_01365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72680.1"
                     /translation="MIASDLNALNHEMHTVAAWMRPEDWLRRNVPGTNLPAFTFWHIA
                     RIIDSTVHMGLRGVPELITSEPWVSKAWARPEGGVGYSAEQADQLAVQVVPGEVLDYA
                     DALRSAVSLWLRSITDEELQAPARLRDHAEAQPAYNTPAVLDAVDALDGQPAWLILTI
                     TCFAHCWAHLEEIRLLAGAGRR"
BASE COUNT          179 a          365 c          345 g          202 t
ORIGIN      
        1 cgtgacctca gccacgtcgc cgcgcgacca acatcactcc gccggccaga agggccagga
       61 cgcctgccac gcgcaacaca gtgtcccgcg ttgttccggg aactacgaac ccgatcgcga
      121 gcagcacgac acccacggcg atggcgacaa tcggattccg gcccaacctg ctggcagtgt
      181 accggtgacc ctggtttcgg ctcatcgctc gggaaggccg gtcttccgcg tgatcaggct
      241 cccgatggct acctgcgtcc ggcgccggcc aacagcctta tctcttcgag gtgagcccag
      301 cagtgggcga agcatgtaat ggtcaggatc agccaggcgg gctggccgtc gagcgcatcc
      361 acagcgtcga ggaccgccgg ggtgttgtag gccggctgcg cttcggcgtg atcccgcagc
      421 cgggccggcg cttgcagctc ctcatcggtg atcgacctca gccagaggct caccgccgag
      481 cgcagtgcat ccgcgtagtc gagtacctcg ccgggcacca cctgaacggc cagctggtcc
      541 gcctgctcgg ctgagtagcc gacgccgcct tcgggacgcg cccaggcctt cgacacccac
      601 ggctcgctgg tgatgagctc gggcacgccg cgcaagccca tgtggaccgt cgagtcgatg
      661 atccgtgcga tgtgccagaa ggtgaaggcg gggaggttgg tgccgggtac gttccttcgc
      721 agccagtctt ctggtctcat ccacgcggcc actgtgtgca tctcatggtt gagcgcattc
      781 aggtcgctgg cgatcacccg gctcgcctcc acacgcacag tgtgatacgg ctggatgcga
      841 cttcactcat gcgcagaggt ggagacgcag cccgcaagac gtggtcggcg gcttttgaga
      901 ccagttttga aaccccggtg agactggctt tgagacggcc ttcacctgag catctggacc
      961 gttccggccg caacgtattt gaggtaacga atcatgctca aacggtttct tcgctttggc
     1021 gtaatcgctc cggtcatggc gctggcgctc cttcccagcg cggtgtccgc cgattccggt
     1081 ctcgccgctt c
//
LOCUS       DASRPQ010000118         1106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1265233, whole genome shotgun sequence.
ACCESSION   DASRPQ010000118 DASRPQ010000000
VERSION     DASRPQ010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1265233"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..418
                     /locus_tag="VFD73_01370"
     CDS             <1..418
                     /locus_tag="VFD73_01370"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HZI72681.1"
                     /translation="ARLERLQDRGVITGYGPDVDPAALGYEVTAFVTLEIRQAGGHDP
                     VAERLAAIAEVLEVHTITGAGDMLCRVVARSNADLQRVIDAIVSTEGVVRSATLISLA
                     TQVSYRVLPLVRAASHQRSLLQDICALAHDFAASGC"
     gene            778..>1106
                     /locus_tag="VFD73_01375"
     CDS             778..>1106
                     /locus_tag="VFD73_01375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72682.1"
                     /translation="MASTLFSCSRSKILWSLRLLVILCLLLVTQFALPRGASAATLAS
                     DDFNRANGSLGAGWTAVSDGSMSIASQQVIGTVGATTGDIRTGETYPSNQFSQIQVTS
                     TALSGGQ"
BASE COUNT          191 a          347 c          365 g          203 t
ORIGIN      
        1 ggccaggctg gaacggctgc aggaccgcgg cgtgatcacc gggtacggac ccgacgtgga
       61 tccagctgcc cttggctacg aggtgaccgc gttcgttacc ctcgagatcc gccaggccgg
      121 cggccacgac ccggtggcgg aacgactcgc cgccatcgcc gaggtactcg aggtgcacac
      181 catcaccggg gcaggcgaca tgctctgccg ggtggtggcc cggtccaacg ccgacctgca
      241 gcgcgtgatc gacgcgatcg tctccactga gggcgtggtc cgctccgcca ccctcatctc
      301 gctggccaca caggtctcgt accgagtcct gcccctggtc cgggcggcct cgcatcagcg
      361 cagcttgtta caggatattt gtgcattggc gcacgacttt gcggcatccg gatgctaatg
      421 tgaccatcag tcacgctacg tcagccggtt tccgcggcct gcggcggacg cctggcgcga
      481 tgggtgttgc catcgtaggg actggagtga tggttgtgac taaaaccggt cacgttatac
      541 cgcgctcgcc gcaggcgcct atgcacacgc cgcgagcgcg tcgtcatctg cagccagata
      601 gctccagatc tggagtatgc gggaggagca cctgaccgat cgagtcagcc aggcacggac
      661 tcagcaggta tcgggtaagc gctttgtcat ctgagcggct gcatcagggc agagccgaga
      721 gataaacaac acttgggcgt tcgctggaaa tcagcggcgg cacggtgggg ggacaagatg
      781 gccagcactc tctttagctg ttcaagatca aaaattctgt ggtcactgag gctgctggta
      841 attctctgcc tcctgctcgt cacgcagttc gcgcttccgc gaggtgcctc ggcggccacg
      901 ctggccagcg atgatttcaa tcgggccaac ggctcgcttg gcgccggctg gacggcggtc
      961 tcggacgggt cgatgtcgat cgcctcgcag caggtgatcg gtacggtcgg cgcgaccacc
     1021 ggtgacatcc ggacgggcga gacgtatccc agcaatcagt tctcgcagat ccaggtgacc
     1081 tcgaccgcgc tgtcgggggg ccagtg
//
LOCUS       DASRPQ010000119         1846 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4399469, whole genome shotgun sequence.
ACCESSION   DASRPQ010000119 DASRPQ010000000
VERSION     DASRPQ010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1846
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4399469"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..187)
                     /locus_tag="VFD73_01380"
     CDS             complement(<1..187)
                     /locus_tag="VFD73_01380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72683.1"
                     /translation="MLTDTSGQPTVTATGIMRAAVIAAPRRTSIDQVNLPQPGSGEVR
                     VRLEGCGVCGSNLPAWEG"
     gene            complement(177..1289)
                     /locus_tag="VFD73_01385"
     CDS             complement(177..1289)
                     /locus_tag="VFD73_01385"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HZI72684.1"
                     /translation="MSPLHGARVERRVLITGGSGFIGTNLAHRLLSQGRPVLLYDSLA
                     RPGVEQNLRWLHDTHGKLVEIMIADVRDAPAVRHAVEQASQVFHFAAQVAVTTSLTDP
                     VEDFEINARGTLNILEAIREQEAPPPLVFTSTNKVYGALEDVGLRRRNLRYEPTDPSL
                     RQTGISENRPLDFHSPYGCSKGTADQYVLDYTRSYGLPAIVFRMSCIYGQHQFGTEDQ
                     GWVAHFLIRALEGKPITLYGDGRQVRDILFVEDLVDAFLLAQERMSVEAGQAFNLGGG
                     PANAVSLLELLHLIAELLGHRPDVRFDAWRTGDQRYYVSDTGKFQRATGWKPETSVHE
                     GLEQLLRWLKETRRRPAVVGAIGPAHGNRRKAAGAD"
     gene            complement(1286..>1846)
                     /locus_tag="VFD73_01390"
     CDS             complement(1286..>1846)
                     /locus_tag="VFD73_01390"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HZI72685.1"
                     /translation="KFDQERMCLMVGRAYGIPTTGLRFFNVFGTRQALSNPYTGVLAI
                     FASRLLNGNRPTVFEDGLQRRDFVSVYDVARACCLVLEHPGSAGGVFNIGSGRSYTIL
                     EIAERIAKVLGKEYLEPEVTGKYRVGDIRHCFADISLARSALGYQPQVQLDDGLEELA
                     HWLEGQEATDRVDQARAELAARGLTV"
BASE COUNT          338 a          600 c          558 g          350 t
ORIGIN      
        1 ggccttccca tgctggaagg ttggaaccgc agacgccgca cccttccagt cgcacccgaa
       61 cttcaccaga tcccggctgt gggagattga cctggtcgat ggaagttcgt cgcggcgccg
      121 cgatgactgc ggcccgcatg atgccggtcg ccgtgaccgt cggctgtcca gaggtatcag
      181 tcagcaccgg ccgccttccg ccggttgccg tgtgccggac caatcgctcc gacgactgct
      241 gggcgtcgcc tggtctcctt caaccagcgc agcagctgtt ccagaccctc atgcaccgag
      301 gtctcgggtt tccacccggt tgcccgctgg aattttccag tatcggagac gtagtaccgt
      361 tgatcgccgg tgcgccacgc gtcgaatctc acgtctggtc tgtgccccaa cagttccgca
      421 atgagatgga gcagctccaa gaggctcacg gcattggcag gcccgccgcc cagattgaat
      481 gcctgtcccg cctcgacgct catgcgctcc tgggccagca ggaaggcatc caccagatcc
      541 tccacgaaca gaatgtcgcg gacctgccgg ccgtctccat agagggtaat gggcttgcct
      601 tccagggcgc ggatgaggaa gtgcgcgacc caaccttgat cctcagtgcc gaactggtgc
      661 tgaccgtaga tacaactcat tcggaacacg atcgcaggca ggccatagct tcgggtgtag
      721 tccagcacgt actggtcggc ggtccccttg gagcagccat aaggactgtg gaagtccaac
      781 ggccggttct cgctgatgcc ggtctgtcgc aaggacgggt cggtcggctc atagcggagg
      841 ttgcggcgcc ggagtccgac atcctccaga gcgccataca ccttgttcgt cgatgtaaac
      901 acgagaggcg gcggcgcctc ttgttcgcga atggcctcca gaatattcaa cgttccccgg
      961 gcattgatct cgaagtcttc gaccgggtcg gtcaaactgg tcgtgactgc aacctgagcg
     1021 gcaaagtgga agacctggga tgcctgctcg actgcgtggc ggacggccgg tgcatcccgc
     1081 acatcggcga tcatgatctc cacgagcttg ccatgggtgt cgtgcagcca tcggaggttc
     1141 tgctctacac caggtcgtgc cagactgtcg tacagcagca ccgggcgccc ctggctcagt
     1201 agccggtgcg cgaggttcgt cccgatgaag ccggatccac ccgtgatcag gactcgccgc
     1261 tcgacgcgcg caccatgcag agggctcata ccgtcagccc ccgcgccgcc agctccgctc
     1321 tggcttggtc gaccctatcg gtcgcctctt gcccttccag ccaatgggct agctcctcca
     1381 gcccgtcatc cagttggacc tgaggttggt accccaatgc cgaacgggcc agggagatgt
     1441 cggcgaagca atgcctgatg tctcctaccc ggtacttgcc ggtaacctcc ggctccagat
     1501 actccttccc caggaccttc gcgattcgct cggcgatctc caggatggtg taggatcgac
     1561 cactcccgat attgaacacc ccgcccgcgg agccgggatg ctccagcacc aaacagcacg
     1621 cccgggccac atcatagacg ctgacgaaat ctcggcgctg gagaccgtcc tcgaatactg
     1681 tcggtcgatt tccgttgagg agccgggagg cgaagatcgc gagcacgccg gtgtagggat
     1741 tggagagtgc ctggcgggtg ccgaagacat tgaaaaagcg caggccggtg gttgggatcc
     1801 catatgcccg gccaaccatg aggcacatgc gttcctggtc gaactt
//
LOCUS       DASRPQ010000120         1916 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_11331, whole genome shotgun sequence.
ACCESSION   DASRPQ010000120 DASRPQ010000000
VERSION     DASRPQ010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1916
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11331"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..579)
                     /locus_tag="VFD73_01395"
     CDS             complement(<1..579)
                     /locus_tag="VFD73_01395"
                     /inference="COORDINATES: protein motif:HMM:NF014919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72686.1"
                     /translation="MAATAVWPGDSYPLGATYDGAGTNFALFSEVADRVELCLFGEDG
                     TESRFDLHEVDGFVWHGYLPGVSPGQRYGYRVHGPYHPADGQRCNPHKLLLDPYAKAV
                     EGAVDWGQPVFSYQFGHPDRRNNADSAPHVPRSVVVNPYFDWNLDRPPRIPYHETVIY
                     EAHVRGLTMQHPVIPDEQRGTYLGLAHPAVISH"
     gene            1317..1466
                     /locus_tag="VFD73_01400"
     CDS             1317..1466
                     /locus_tag="VFD73_01400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72687.1"
                     /translation="MKTVVPDLTDVSLDQLAEFGATPLAHSIALYRERLKKNGVPLSS
                     FNARI"
     gene            1473..>1916
                     /locus_tag="VFD73_01405"
     CDS             1473..>1916
                     /locus_tag="VFD73_01405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72688.1"
                     /translation="MSRAAALKNHTLPETAFTALAAGEGDTDIICLLRRAQQSKHTML
                     LHAIAEAARDVDPGDPAIIAFRAGYELLARVQEADLAVSTWLLGLPQFGGWANDGLIR
                     LDQGTPPDFAYLACAAAAGAVRARVPFELDVPARDGHVLLPGLGRI"
BASE COUNT          343 a          637 c          576 g          360 t
ORIGIN      
        1 gtgcgagatc accgccggat gggccaggcc caggtaggtg ccgcgctgct cgtcagggat
       61 gaccgggtgc tgcatggtca ggccgcggac gtgcgcctcg tagatgacgg tctcgtggta
      121 cgggatgcgg ggcggccggt ctaggttcca gtcgaagtac gggttcacca ccaccgagcg
      181 cggcacgtgc ggcgcggagt ccgcgttgtt ccgccggtcc gggtgcccga actggtacga
      241 gaacaccggc tggccccagt ccacggcgcc ctcgaccgcc ttggcgtacg ggtcgagcag
      301 cagcttgtgc gggttgcagc gctgcccgtc ggccggatgg taggggccgt gcacccggta
      361 cccgtaccgc tggccggggc tgacgcccgg caggtaccca tgccacacga acccgtcgac
      421 ctcgtgcagg tcgaaccggc tctccgtgcc gtcctcgccg aacaggcaca gctcgacccg
      481 gtcggctacc tcggagaaca gggcgaagtt cgtgccggcc ccgtcataag tggcgcccag
      541 cggatagctg tcgcccggcc atacggcggt cgccgccaag tgcttcccat ctctctcgct
      601 gaacacgcgc tccgatcatc acacaccttc ccacctcgag ggcgaccaca cgggatcacc
      661 ctggccggca gcaagctgac cacgcgaaac ccaggatagt cactgtaacg attaaatctc
      721 gggagctacg aatcctgccc gcttccgtcc gcgacagcat ttgacctcag cgttccgccc
      781 tagaggattt ctgaaatctg gcggcggaac gcttaccgac atgctaaaag gttatctggg
      841 atccgccagc cacctacggt gacaccgtcg gcgacgaggc gattagactc aatttcgcgc
      901 ccggcgggcc ggctggaatg ctgccattcc gatggaatta acggaaaggc acattgcata
      961 tgcggtcggc tttcgttccc gatttcggca cctctaaacg gattgtaact aatcttaacc
     1021 aatgttacag gtgattccca tggacacagt gagacacatt caatctgtcc agtttcgtac
     1081 attcatgtct ttagccgtcg ctcgcctcac tacttcgatc acgcctctcg ccagcctggt
     1141 tagctgcttc ttaagctgcg ttctagacgt cgcggtgacg tcaaccactg aggccaccgc
     1201 ggcatcatgc gattgagtcc gttggtccgc cggagtatct tcggagtcgc gacgaaagcg
     1261 gttttgttcc tttctcccta tatccggaga tataaatgac catgccaccg gagagcatga
     1321 agacggtagt ccccgatctg accgacgtta gcctagacca gctggccgag ttcggcgcca
     1381 ccccgctcgc gcactccata gctctctacc gggagaggct caagaaaaat ggcgtgccgc
     1441 tcagctcttt caatgcgagg atataggagc cgatgagccg ggccgccgcg ctcaagaacc
     1501 acaccctgcc ggaaacggca ttcacggctc tcgctgctgg cgagggagat acagacatca
     1561 tctgcctgct gcgccgagcg cagcagagca agcacaccat gctcctccat gctatcgccg
     1621 aggctgctag ggatgtcgat ccaggcgatc cggcgataat cgccttccgg gctggctatg
     1681 agctgcttgc ccgggtccag gaagccgatc tggccgtctc cacctggctg cttggtctgc
     1741 cccagttcgg cggctgggcc aacgacggcc tgatccgcct cgaccagggc acgcctccgg
     1801 acttcgccta cctggcctgc gcggcggctg cgggcgcggt ccgggccagg gttcccttcg
     1861 agctcgacgt cccggcccgc gacggtcacg tcctgctgcc cggcctgggc cggata
//
LOCUS       DASRPQ010000121         1450 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_951404, whole genome shotgun sequence.
ACCESSION   DASRPQ010000121 DASRPQ010000000
VERSION     DASRPQ010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_951404"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..470
                     /locus_tag="VFD73_01410"
     CDS             <1..470
                     /locus_tag="VFD73_01410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72689.1"
                     /translation="DVTSMIPSSLTVASVLVVLVSACASEGTAPAARPSVGIWNQGAN
                     LRDSVNKQTHIHTGYFSFSQAGNGFTGTGEQSGFCHGANGDYVGPLAEGTPFKVTDGV
                     QQGDRVSFKTDLCSYEGALSEDHDHMNGTVRCAYIDNGVSFVWQGDWLANRER"
     gene            497..760
                     /locus_tag="VFD73_01415"
     CDS             497..760
                     /locus_tag="VFD73_01415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72690.1"
                     /translation="MTLFNSRIRLVRLRPEFAELYPGLDPSVWETATELMARLIGQHR
                     VQPSPGFKPSNRVLPDAHFEFQGGDARRGSWQPSRVTDQPQPT"
     gene            complement(806..1273)
                     /locus_tag="VFD73_01420"
     CDS             complement(806..1273)
                     /locus_tag="VFD73_01420"
                     /inference="COORDINATES: protein motif:HMM:NF016535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HZI72691.1"
                     /translation="MPILSFLVFALLGVLAGASLATQAAVNAELGKSLSSLSAAAFVS
                     YLGGTIVMGLVLAIGGGTGLTSVPLSTTILGRVPWWAWTGGFLGSVYVMISIWLVPRL
                     GSATVLSLFVLGQMIASVIFDNFALLGLQQRPADPGRVIGAGLVVLGVLLMRR"
BASE COUNT          289 a          484 c          442 g          235 t
ORIGIN      
        1 gtgatgttac ctcgatgatt cccagcagcc tgacagtcgc ctcggttctt gtggttctgg
       61 tgagcgcctg tgcttccgag ggcaccgcgc ccgccgcgcg gccgagtgtc ggcatctgga
      121 accagggtgc caatcttcgt gactccgtga ataagcagac ccacattcac accgggtatt
      181 tctccttctc ccaagcgggg aacgggttca ctggaaccgg cgagcagagc ggattctgcc
      241 acggtgcaaa cggcgattac gtcggacctc tggccgaggg cacgccattc aaggttacgg
      301 atggggtcca gcagggcgac cgagtgtcgt tcaagactga cctgtgtagt tatgaaggcg
      361 cgctatcgga ggaccatgac catatgaacg gcaccgtccg ttgcgcgtac atcgacaacg
      421 gcgtcagctt cgtctggcaa ggcgactggc tggcgaatcg ggaacgctga atggggctga
      481 ctcggatcct gacccgatga ccctgttcaa cagcaggatc cgtctggtcc ggctgcggcc
      541 ggagttcgct gagctctacc ccggtctgga tcccagcgtc tgggagaccg ccaccgagct
      601 catggccagg ctcatcgggc aacaccgggt gcagccgagc cccgggttca agccgagcaa
      661 tcgcgtcctg cccgatgctc atttcgagtt ccagggcgga gacgcccgtc gaggctcctg
      721 gcagccgtcc cgagtcaccg accaacctca gccaacctga tcgtcgagag cggtcgctgt
      781 cacgaagctc gctgctcgtc ctgcattagc gccgcatcag caataccccg agcacaacca
      841 ggccggcacc aatcacccgc ccgggatcgg ctgggcgctg ctgcagcccc agcaacgcga
      901 agttatcaaa gatgacggat gcgatcatct gacccaggac aaacagcgag agcaccgtcg
      961 cgctgcccag ccgcggcacc agccagatcg aaatcatcac gtacactgac cccagaaagc
     1021 cgccggtcca ggcccaccac gggacccggc ccagaatggt cgtgctgagc ggcacgctgg
     1081 tgaggcccgt ccctcctccg atggcgagca ccagccccat gacgatcgtc ccccccagat
     1141 agctcacgaa ggcagccgcg gaaagcgagc tgaggctctt ccccagctcg gcgttcaccg
     1201 ctgcctgggt ggccagactc gcgccggcga gcacgccgag gagtgcgaac acgaggaagg
     1261 acagtatcgg catggtcggc acctccgcgg cgaagagtag atcctgcaaa aaaacagagc
     1321 ggtgccgggt ggcaccgctc ttactatcct aaactagcgc cggcttagta gcaggccgga
     1381 gcgccttcgg ctttgaccgc ggcgttcggc gcattggccg caacacccac gtacacaccg
     1441 cagacgtcgc
//
LOCUS       DASRPQ010000122         1058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2525600, whole genome shotgun sequence.
ACCESSION   DASRPQ010000122 DASRPQ010000000
VERSION     DASRPQ010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2525600"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..269
                     /locus_tag="VFD73_01425"
     CDS             <1..269
                     /locus_tag="VFD73_01425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI72692.1"
                     /translation="SGGKERLGRTSKRGDKYIRSLLTAGAVAVLRHARHRPTRDGQWV
                     RALLARKPTKLAAVALANKTARIVWAVMRRGDGYRAKQVFEQPA"
BASE COUNT          225 a          315 c          326 g          192 t
ORIGIN      
        1 cgagcggcgg caaggaacgc ttgggccgga ccagcaagcg cggcgacaaa tacatccgca
       61 gtctgctcac cgccggcgcg gttgccgtgc tgcgccatgc ccgccatcga ccaacccgtg
      121 atgggcaatg ggtccgggcg ctgctggcac gcaaaccgac caaactcgct gcggtcgcac
      181 tggccaacaa gaccgcccgc atcgtctggg cggtgatgag gcgcggggat ggataccgag
      241 cgaagcaagt atttgagcag ccggcatagc caccgacagc tcattcagca tgcgagggtg
      301 aagaagaggt gatggcaagc ggtcgagccg cggatcggga agacccgaaa aattcaaagc
      361 gcagcgcagc gcgcagtctt gatagggacc cgatcagcga actccatcag ggccggcggt
      421 cataggcacc gcactcaagg gccggacata tgactgcacc cgaccatttt gccaagactg
      481 aactcagaac cctttgcagg cgagggccgt ccacatatga gttttgtgag cggcttcgca
      541 tgcagagggg gaggtataag caccaccacc ggctcgatcc cactcccacc cccggtcttt
      601 tcggggccgg gagtgtgggc ttgggcgttg atcgcgtcgg gtataggcgc aactcgccca
      661 gaatgacgga cagctgtgcc ggccaacgtc cgcaacgtta gtattgatct accgggttaa
      721 cgctgtctct ccggcatatc ggcgggtaca atccgctcac cgtcctatgc ggcactggtt
      781 gtggccattg ctgccgccgg attcaggcca ccccggtaag ctgagacttt catcctcggg
      841 atacctaggg gatacctaaa ttccgctgat ctcggactgt cccctataaa tccttgattt
      901 tgtggtgggt gcacaaggac tcgaaccttg gacccgctga ttaagagaaa gtgactaata
      961 ccgtactgcc gtgcccgcgc cggctgatag gtatagcatg agtgcgcccg atcctttcgc
     1021 cctgggggta gacgatagga tgacgaggcc atcctgac
//
LOCUS       DASRPQ010000123         1618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_11926, whole genome shotgun sequence.
ACCESSION   DASRPQ010000123 DASRPQ010000000
VERSION     DASRPQ010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11926"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..878
                     /locus_tag="VFD73_01430"
     CDS             <1..878
                     /locus_tag="VFD73_01430"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HZI72693.1"
                     /translation="VVATPGPVVITHLSDLHFGGYADLKQIEALEEFLPTLNPTALVI
                     SGDVSQRARHGEFQAGHVFLHRMRMRMPALIVPGNHDVEWWKSPFGILGEKRKYAKYK
                     LYYGDLRPQLEVPGAIILGAVSGYGVAFGSLTWNLRDLAVKGHMPRSETNRVKKIFSN
                     TPNTLAKVLVVHHNVLAGGTGRMGLARWRSAHRRLQETGADVILCGHDHYEGAGQIEG
                     GVAVSTSGTHSYRQRGGRPSVFNLVTLDADSVHIQHFRWVSADRQFIPSDKFSFARRG
                     APKVAVSVAGGDQGL"
     gene            947..1561
                     /locus_tag="VFD73_01435"
     CDS             947..1561
                     /locus_tag="VFD73_01435"
                     /inference="COORDINATES: protein motif:HMM:NF021759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT-like domain-containing protein"
                     /protein_id="HZI72694.1"
                     /translation="MDRIQTHANTTVMLSLNRRTLRLHRGYAFAPDEVLRAIVRFLDP
                     RIPRGSRRQAEREFLRFPVSAYVAPRERPRIERARPGDVALLNRLTELHRALNVRYFG
                     GALRDIPIRLSGRMKSRLGELAANWDTGEAREIGISRRHVLRHDWSEVEHTLLHEMVH
                     QWQAEAGLRVDHGASFRTKAREVGIVPAAKRQVVVPPGVRQAAG"
BASE COUNT          293 a          487 c          526 g          312 t
ORIGIN      
        1 tagtcgtggc aacgccgggg ccggtggtca ttacccatct gtccgacctt cacttcggcg
       61 gctacgccga tctcaagcag atcgaggcgc tggaggagtt cctcccaacc ctgaatccga
      121 cggccctcgt catctccggt gacgtcagcc agcgggcccg ccatggcgag ttccaggcgg
      181 gacacgtctt cctccaccgc atgcgaatgc ggatgccggc cctcatcgtt cccggcaatc
      241 atgacgtcga atggtggaag agcccgttcg gaatactcgg tgaaaaacgg aagtacgcga
      301 agtacaagct ctactacgga gacctccggc ctcagctgga ggtcccgggc gcgatcattc
      361 tcggggcggt gagtggctac ggtgtggcgt tcggctcgct cacctggaac ttgcgggatc
      421 tggcggtgaa agggcacatg cccagatcgg aaaccaaccg ggtcaagaag attttctcca
      481 ataccccaaa caccctggcc aaggtgcttg tggttcatca taacgttctg gccgggggta
      541 ccggccggat gggattggcc cgctggcggt cggcccatcg gcggctgcag gaaaccgggg
      601 ccgacgtcat tctctgcggt cacgaccact acgagggcgc cgggcaaatc gaaggcggtg
      661 ttgcggtcag cacctccggt actcacagct atcgccagcg gggtggccgc ccatcggtgt
      721 tcaatctggt cacgctcgat gccgattcgg tccacatcca gcattttcgc tgggtttccg
      781 ccgaccggca gtttatccca tccgataaat tttcttttgc ccgacgtgga gcgccgaagg
      841 tcgcggtatc ggtggcaggc ggggatcagg gactgtgata ccgggccagt gctttctctt
      901 cgaagagtgt ctgcccgagc gacttcggag acttggactg atccacgtgg atcggattca
      961 aacccacgcc aacacgacgg tgatgctgag tctgaatcga cgcacactcc gtctccaccg
     1021 cggatatgcg tttgctcccg atgaggtgtt gcgagccatc gttcggttcc tcgatcctcg
     1081 catcccgcgg ggcagccgac ggcaggccga gcgtgaattc ctgagatttc cagtctcggc
     1141 ctatgtcgca ccgcgtgagc ggccgcggat cgagcgcgcc cgcccgggag acgtggcact
     1201 gctgaatcga ctgactgaac tgcaccgagc cctcaatgtc cgttatttcg gtggcgccct
     1261 ccgcgatatc ccgattcgcc tgtccggccg gatgaagagc cggctgggcg agcttgcggc
     1321 caactgggac actggtgagg cgagggaaat tgggatcagc cggaggcatg tcctgaggca
     1381 cgattggtcg gaggtggagc acaccctctt gcacgagatg gtgcatcagt ggcaggcgga
     1441 ggcgggactt cgggttgacc atggtgccag cttccggacc aaggcgcggg aagtgggaat
     1501 tgtgccggcc gccaagcggc aggtcgttgt cccaccggga gttcgccaag ctgccggctg
     1561 acccctgtac ggctcgtccg cggacggtat actcaagtga aggtggcgga cgtaggaa
//
LOCUS       DASRPQ010000124         1954 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3153388, whole genome shotgun sequence.
ACCESSION   DASRPQ010000124 DASRPQ010000000
VERSION     DASRPQ010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1954
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3153388"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..218
                     /locus_tag="VFD73_01440"
     CDS             <1..218
                     /locus_tag="VFD73_01440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72695.1"
                     /translation="GDDQLRVLEALEALSLGIQGKLLLWRALATVASRVPPLQSVDLG
                     RLQQRASEQFEQVDGERLQVAKAALAR"
     gene            279..497
                     /locus_tag="VFD73_01445"
     CDS             279..497
                     /locus_tag="VFD73_01445"
                     /inference="COORDINATES: protein motif:HMM:NF039472.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6494 family protein"
                     /protein_id="HZI72696.1"
                     /translation="MNEEVFNLELRKFLKKFGVTAQREIEKAVQAGLERGALSGDETL
                     HVEATLSMGSILPALRIDGDIALTRSAP"
     gene            588..1424
                     /locus_tag="VFD73_01450"
     CDS             588..1424
                     /locus_tag="VFD73_01450"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HZI72697.1"
                     /translation="MPTPHAPAGTSPRQLVSPRERTRYALVLGISLAVYGGLALGAVQ
                     NPQAAATIVAYGLVFSLLGLLTHGLALGRIRGNAVRVSERQFPVVLRLAVAHARKLGL
                     KQVPAIYVVQSGGLLNAFATRFLGRDFVILYSDVLELALARGEAAVGFIVAHELAHVA
                     RGHLKHRWLTAPGRFFPYLGAAYSRACEYTCDRLGAFCQPDGAITGLLALAAGKRLHG
                     LVDVREFAAQAVSDHGFWVRRAELVSSHPLLTKRVAALLNAGIVIPPREQWAASSQAV
                     AA"
     gene            1561..>1954
                     /locus_tag="VFD73_01455"
     CDS             1561..>1954
                     /locus_tag="VFD73_01455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72698.1"
                     /translation="MAPRRRYQLELVTVWPGDRRSATWTFGGSPVSGEEQSYAVRDEN
                     FASRNEWEFIVRIPDSRDDRIEVRPRTTPNLKAWAELPDRSLTFSRATKGDARGKWYC
                     QVALADPTGAKSRDVIRRDQRDQLPRWFD"
BASE COUNT          355 a          594 c          633 g          372 t
ORIGIN      
        1 ccggtgacga tcagctgcga gtcctggaag cattggaagc attgagcttg ggtatacagg
       61 gaaagctttt gctgtggcgc gcattggcta cggtggcgag cagagtgccg ccactccaat
      121 cggtagacct cggccggctt cagcaaagag ccagcgagca gttcgaacag gtggatgggg
      181 agcgtttgca ggtggccaaa gcggccctcg caagatgatc agcgcgagac tgcgcacacc
      241 ttcgccaaac tctagagacg cctacactgg aggccctaat gaatgaggag gtcttcaacc
      301 tcgagttgcg aaagtttctc aagaagttcg gagtaactgc tcagcgcgag atcgaaaagg
      361 cggttcaggc cggcctcgag cgcggcgctt tgagcggaga tgaaaccctg cacgtggaag
      421 ccacactctc gatgggatcg atccttccgg cacttcggat cgatggagac atcgcgctta
      481 ccagatccgc gccatagagc tgcaactcct tgcacgcatt gacgtagcgc tgcgcgacta
      541 tcgatcttcc gcagccccct tttacctctc acaagctgga gttctccatg cctacgccgc
      601 acgcgcccgc gggcacgtcg ccgcgccagc tggtctctcc gcgtgaacgc actcgctatg
      661 ctttggtgct cggtatcagt ctggctgtgt acggcggtct ggcgctcggg gcggtgcaga
      721 acccccaagc ggccgcgacg attgtggcgt acggtctggt gttcagcctc ttaggactcc
      781 tgacccatgg cttagcgctg ggacgcattc gcggcaacgc agtccgggtg tccgagcggc
      841 agtttccggt ggtgctgcgg ctggcggtag cgcatgcccg gaagttgggc ctcaagcagg
      901 tgcccgcgat atacgtcgtc caatctggtg gattgctgaa tgcgttcgcg acgcggtttc
      961 tcggacggga ctttgtcatc ctctactccg atgtcctcga attggcactg gcccgaggag
     1021 aggcagccgt aggattcatc gtggcccacg agctggcaca tgtcgcgcgc ggccacctga
     1081 agcaccggtg gcttaccgct ccggggcgat tctttccgta tctcggggct gcatactccc
     1141 gggcgtgtga gtatacctgc gaccgtctag gcgcgttttg ccagcccgac ggggccatca
     1201 caggattgct ggcgctcgcc gctgggaaac ggctccatgg cctggtggac gtccgggagt
     1261 ttgccgcgca ggcggtctcg gatcacggct tctgggtccg gcgagcggag ctggtgtcgt
     1321 ctcatccgct gctgaccaag cgagtagcgg cactgctgaa tgccggcatt gtcattcctc
     1381 ccagggagca gtgggccgcg tcctcgcagg cggtagcggc ataacacagt cagggccgcc
     1441 gtcgaccgat ggcggccccg ctcctgttgc gtcgtgcggc aggatgaccc atcatcgtag
     1501 tgtcctacag tccagccact gcttctcatt cagcgtctcg gccaccacag ggaggccagg
     1561 atggcaccac gacggcgcta tcagctggaa cttgtaacgg tttggcccgg cgaccggcgc
     1621 agcgccacat ggacgttcgg tggaagtccc gtcagcgggg aggagcaaag ctacgcggtc
     1681 cgcgacgaga actttgcttc gagaaacgaa tgggagttca tcgttcggat tccggatagc
     1741 cgcgacgatc ggatagaagt ccggccccgc accacgccaa acctgaaggc gtgggccgag
     1801 ctgccagacc gctcgctcac gttttcccga gcgacgaagg gagacgcgcg aggcaagtgg
     1861 tactgccagg tcgcgctcgc agacccgacc ggagccaaga gccgagacgt gatccggcgc
     1921 gaccagcggg atcaattacc tcgctggttc gatc
//
LOCUS       DASRPQ010000125         2061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2526732, whole genome shotgun sequence.
ACCESSION   DASRPQ010000125 DASRPQ010000000
VERSION     DASRPQ010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2526732"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            202..>2061
                     /locus_tag="VFD73_01460"
     CDS             202..>2061
                     /locus_tag="VFD73_01460"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZI72699.1"
                     /translation="MRTSMISCQTLGPVGLSLDGAPAPPELLWRKHLGLLVYLARSPR
                     GRTREHLIGLLWGEKPEASARHSLNEAIRVLRRYLGDENVDTAAGQVRLTPGSVRLDV
                     ERFEELAAASDWAGAARLIAGEFLEGFSIAGASEFENWLASERSGVRLRSVDVLVHHA
                     GDLLRAGQAAEASAVAARALGLDPTSEPAVQIAMRSLVLAGDRAGALERFEEFTARFQ
                     EEVGTAPGTETQALAERVRHERPIRPAAVTHSPELSEREARLPLIGREAELTRLAETT
                     AQACREHRACGLVLEGESGSGKTRLLEEFLARLRLDGVVVAAVRAVEADREEDWSGVL
                     GLARSGLLDARGLAGAPSRALAVLADAIPEWADRFPGVRHEGTPLSYGKALSEVLRAV
                     TEEQPIALAVDDAQWLDQPSMLALLAAFRDLEAAPLILLFAADSHPPRLELDNLRSRL
                     GGTLRGVALRLSLLDSADLRALARRMLPGFSEVEIERVARRVATDSAGLPLLAVELLR
                     AVALGLDLRGSAGAWPEPYKTLDQTLPGDLPDTVVAAIRVGFRRLSPGAQRALAAASV
                     LGDRISLELLAKVLGLPAAQVATSLDELEWHRWLVYDPRGYTFVARVVRKVVAR"
BASE COUNT          322 a          654 c          713 g          372 t
ORIGIN      
        1 ggccggcggc ataggttatc ggaaagctga atccacaatt caggcatgtc agtacgacag
       61 tcaccaacgg ctcctgagag tcactggcga acaatcgcac ccgcaggaca tctccgcagt
      121 gcgcgggacc acatccgacc atcacggcag gtcacactca cgcttgagct ttcggcgggt
      181 atcttaggat taaggaccac cttgagaacg tcgatgatct cttgtcagac gttgggaccc
      241 gtcggtctga gtctcgacgg ggcgcctgct ccacccgaac tcctctggcg caagcacctt
      301 ggtttgctgg tgtacctcgc gcgctcaccc cggggtcgta cccgcgagca cctgatcggg
      361 cttctctggg gagaaaagcc cgaggcttcc gcccgccatt ctctcaacga ggccatccga
      421 gtcctccggc ggtatctggg ggacgagaac gtcgacaccg cggccggcca ggtgcggctc
      481 acgcccggat ccgtgcgact cgacgtcgag cggttcgagg agctggcggc cgccagcgac
      541 tgggccggcg cggcccggct gatcgccggt gaatttctcg aagggttctc catcgcggga
      601 gcgtcagagt tcgagaactg gctggcgagc gaacgctcgg gcgttcgact gcggtcggtg
      661 gacgtcctgg tgcatcacgc tggtgacttg ttgcgagctg ggcaggccgc tgaggcctcc
      721 gcagttgccg cccgcgcgct cggtctcgac cctacctccg aaccggcggt acaaatcgct
      781 atgcgcagcc ttgtgcttgc cggtgaccgg gcaggggcgc tggagcggtt cgaggagttc
      841 actgcccgat ttcaagagga ggtgggcact gctcccggca cggagaccca ggctctggcg
      901 gaacgcgtgc ggcacgagcg gcccatccgg cccgctgccg tcacccactc gcccgagttg
      961 agtgagaggg aggcccggtt acctctgata ggccgcgaag ccgagttgac ccgtctggcg
     1021 gagacgacgg cccaagcctg ccgagagcac cgcgcctgcg gtctggtgct tgagggcgaa
     1081 agtggctccg gaaaaacccg cctattggag gagttcctgg cccggctccg gctcgacggt
     1141 gtcgtggtgg ctgcggtgcg cgcggtcgaa gccgaccgcg aggaagactg gagcggggtg
     1201 ctgggcctgg cccgaagcgg cttgctcgat gcgcgtggtc tggcgggggc tccctcgcga
     1261 gcactcgcag tcctggccga tgccatcccc gaatgggccg atcgatttcc cggagttcgc
     1321 catgaaggaa cgccgctctc gtacgggaaa gccctgagcg aagttctccg agcggtgacc
     1381 gaggagcagc cgatcgcatt ggcggttgat gatgcccagt ggctcgatca accatcgatg
     1441 cttgcgctgc tggcggcgtt tcgcgacctg gaggcggcgc ctctgatcct cctttttgca
     1501 gcggactcgc acccgccccg actggagctc gacaatctgc ggagccgatt gggcggaact
     1561 cttcgcggcg tggcgctacg gctcagcctg ctggactcgg ccgatctgag ggcgctggca
     1621 agacggatgc tgcctggctt cagcgaggtc gagatcgagc gagtggctcg tcgggtggcc
     1681 accgattcag ccggccttcc tctcttagcg gtagagctgc tgcgtgcggt ggcgctggga
     1741 ctcgatcttc ggggctcggc gggagcctgg cccgagccgt acaagacgct ggatcaaacg
     1801 cttcctggag acctgccgga cacggtcgtc gccgccattc gggtagggtt tcgccggttg
     1861 agccctggcg cgcagcgagc gcttgcggcg gcctcggtac tgggagaccg gatttcgctg
     1921 gagctcttgg ctaaggttct gggcctgcca gcagcccagg tcgcgacatc cctggacgag
     1981 ctcgagtggc atcgctggct ggtctacgac cccagaggat acaccttcgt cgcccgtgtc
     2041 gtgcgcaaag tggtcgcccg t
//
LOCUS       DASRPQ010000126         1089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1896849, whole genome shotgun sequence.
ACCESSION   DASRPQ010000126 DASRPQ010000000
VERSION     DASRPQ010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1896849"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(539..>1089)
                     /locus_tag="VFD73_01465"
     CDS             complement(539..>1089)
                     /locus_tag="VFD73_01465"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI72700.1"
                     /translation="GFLREMLVAPVRRWAIVIGKCLGGATVATFQGVIFLALAGVAHV
                     PYDPVLLLTLVGELLLLSFTLTAFGVMMAARIKQIQAFMALTQLFVLPLFFLSGALYP
                     LNGLPAWLTVLTRVDPITYVVDPMRQAVFAHLPFGQVLNRLSPGVTWFGWQVPLGLSL
                     GIVAAMGLAMLGIAIAEFRKTE"
BASE COUNT          212 a          290 c          409 g          178 t
ORIGIN      
        1 aagggaaatt gacactggct tggcttggct cggcttggga gcgttgaggt gagtaccagg
       61 gaggacacgg ggagtgaaga tcattagggg tggggtcatg atcgagggac ggggcggagg
      121 gatcttggtg actcggtgtc acgggggtgg ccggggcgct gaggtcgcgg gctgggcgcg
      181 gggtgccggg ggcccggaga cgtggagagc cggggcgccg gggaggttca gcggggttct
      241 ggggatgctc tggggatcat ctgcgggagg ggttgcgggc gcgaggagga tcaggggtga
      301 agtgggtttg cgccataact gcgaattagg ttccccgggg tgcgagagtt ggagttatgg
      361 cgcgcgagcg caatccgtaa ggtttcttgc gctacagaga gcggaatggt tgcgtagcgt
      421 ggcgaggatt gttcgtcact tttcgttata gagacgagca aaacctggag aatgatcagc
      481 agctgcttac taattaatgg atcccgaatg ccgccgcatt gtatgcaatg tgcgatggct
      541 attctgtctt acggaactcg gctatggcta tgccgagcat cgccagcccc atggcggcga
      601 ctatgcccag cgacagacct agcgggacct gccagccgaa ccaggtgacg ccgggactca
      661 gccggttcag cacctggccg aagggcaggt gggcgaacac cgcctgccgc atcgggtcga
      721 ccacgtaggt gatcggatcg acccttgtca gcacggtcag ccaggccggc agcccgttca
      781 gcgggtacag cgcgccggac aggaagaaca gcggcagcac gaacagctgg gtgagcgcca
      841 tgaacgcctg gatctgcttg atcctggccg ccatcatgac gccgaacgcg gtcagcgtga
      901 acgacagcag cagcagctcc cccaccaggg tgagcaacag caccggatcg tagggcacgt
      961 gcgccacgcc ggccagggcc aggaagatga ccccctggaa ggtggccacg gtcgcgccgc
     1021 ccaggcactt gccgatcacg atggcccagc ggcggactgg cgcgaccagc atctcgcgca
     1081 ggaagccga
//
LOCUS       DASRPQ010000127         2882 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1579775, whole genome shotgun sequence.
ACCESSION   DASRPQ010000127 DASRPQ010000000
VERSION     DASRPQ010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2882
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1579775"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..356
                     /locus_tag="VFD73_01470"
     CDS             <1..356
                     /locus_tag="VFD73_01470"
                     /inference="COORDINATES: protein motif:HMM:NF024375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZI72701.1"
                     /translation="FTNTVETSMVQAIPAPFPNTKGTVTIQVLNSDQSLGPAVIVLRM
                     EPGSEIARHLHEETTETSYVLEGVFINEGISYPPGSEWNIKPNTPHGPHTTEVGCTVL
                     VTFSYPSTLEDFKLA"
     gene            738..1166
                     /locus_tag="VFD73_01475"
     CDS             738..1166
                     /locus_tag="VFD73_01475"
                     /inference="COORDINATES: protein motif:HMM:NF013331.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group 1 truncated hemoglobin"
                     /protein_id="HZI72702.1"
                     /translation="MAEPTLYERLGGIFAIAAVADRFSERVLKNPKIVDANPELHEWH
                     TVTYRTRLPGLKWGRTLWLADVAGGPYEYTGREMRDAHFDFKISPEVFDEVSAELANA
                     LDDFNVPEREKQEVLAAFNGEKGEVSAGSQPGEVNWRRWR"
     gene            1476..1757
                     /locus_tag="VFD73_01480"
     CDS             1476..1757
                     /locus_tag="VFD73_01480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72703.1"
                     /translation="MTPRSTSITSITRPTYHVVGLLTEHAEIPVISSELKSAGVDVAA
                     VEILCGERGAAILDEHGRYHRLRARVVRAFQRLGYDRRPWRPTTRRCAR"
     gene            2201..2536
                     /locus_tag="VFD73_01485"
     CDS             2201..2536
                     /locus_tag="VFD73_01485"
                     /inference="COORDINATES: protein motif:HMM:NF019401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1622 domain-containing protein"
                     /protein_id="HZI72704.1"
                     /translation="MIEKIGMTIDAAGVVVIVTGAAIAFVVTAVRLSRRESDVYRRFR
                     QQLGRAILLGLELLVAGDIVRTVAASPSLTSVAILAAIVLIRTFLSFSLELETTGRWP
                     WQKRDISAS"
BASE COUNT          549 a          917 c          925 g          491 t
ORIGIN      
        1 cctttacgaa cacggtcgaa acctcgatgg tccaggctat accggcaccg tttcccaaca
       61 ctaaagggac tgtcacaatc caggttctga acagtgacca gtctttgggt cccgcagtga
      121 tcgtactgag aatggagcca ggaagcgaga ttgcaagaca cctgcacgag gagacaacgg
      181 agacgtcgta cgtcctcgag ggtgttttca taaacgaagg catctcatat ccaccaggct
      241 cggagtggaa tatcaagccg aacactcctc acggtcccca cacgacggag gttggctgca
      301 ccgtcctggt tacgttcagc tatccgtcca cgctcgaaga tttcaaattg gcctagcggg
      361 gtcagcccca ccggagccga cgtctgtatg aacaaagcgg ccctggcggc ccgccgctct
      421 gatctggctg acggtgtcgt ccgccccctt ggcatcgatg tcggccacga tcacgtctgc
      481 ccccgcacgg gcaaagggat cgctgtagca cgcccgatgc ccgccgagcc tcccgtcacg
      541 gtggcgactg cggcacggat ctgcattatt cccgagcctc cggcgcgtgg tactcacggc
      601 atattgctgg ccatgttgct gccaattcgc cagccgacca aagctcttgg gagcccatag
      661 agtcccaacc gggccgcccc catgaattgg gacgacccac cgatcagtca ggagacgacc
      721 cgtaggagga tggagtcatg gccgagccga ctctttatga acgtctgggc ggcatcttcg
      781 ccattgccgc cgtggccgac cgcttcagcg agcgggtgct gaagaacccg aagatcgtcg
      841 acgcgaaccc cgagctgcac gagtggcata cggtgaccta ccgcacgcgg ctgccggggc
      901 tgaagtgggg cagaaccttg tggctcgccg acgtggcggg ggggccatac gaatacaccg
      961 gccgggagat gcgcgacgcg catttcgact tcaagatctc acccgaggtg ttcgacgaag
     1021 tgtccgcgga actagcgaac gccctggatg atttcaacgt gcccgagcgc gagaagcaag
     1081 aggtcctggc cgccttcaac ggagagaagg gtgaggtttc ggctggttcg cagccggggg
     1141 aggtcaattg gcgccgctgg cgttgagccg ggcgtgatcc gggcagcgaa ctcaatccag
     1201 ggataacctg gacacgacgc ggcggagatg gtgagcaggg aaaacagtat cggacttcgc
     1261 cgtcttaact ggacgtctgg tggaccctga ccccccggat ggattccgcg gcactgacca
     1321 ggcgcgctgc gttgatcgat ggatcaaacg atcagcgatg cggccaagct ggtcagtccg
     1381 tgacaacccg gcagacgcgc gcggcgtggc agaacagcac acgggtgctg ttaccgcatc
     1441 atgctgggac ggctcgagtg ggagccgcga tatgaatgac ccccagatca acgtcgatca
     1501 cttctatcac ccggcccacc taccacgtgg tgggcctgct gaccgagcac gcggagatcc
     1561 cggtcatctc cagcgaactc aaatcggccg gggtggacgt cgcagcggtg gagatcttgt
     1621 gcggcgagcg cggagctgcc attttggatg agcatggccg ctaccacagg ctgcgagccc
     1681 gggtcgtgcg ggcctttcag cggctcggtt acgacaggag accctggaga cctacgacga
     1741 ggcgctgcgc acggtgacct gctgctgcag gttccggtgc gcccggctga ccgttaccac
     1801 ataacggcgc tgctccagcg ccaccaggtc cacgacgtgg gctacttcgg gccgggcacc
     1861 ttcgagcagt tcgctatccc cgatacgggc tgacgccgat ctgccccgga acagctggcc
     1921 gccttggcgg ctggtgcgtc caggacctcg cgccgtgccc gccgcatgcc cgaaaggagg
     1981 gtcacacccg gcgattcacg gtcattcacg gcgcaaccgc actgctattg acctgtgcaa
     2041 ccacaggtac ccgccagacc tcgcccctta gcggcccggg cggtggaagg agatgccagc
     2101 atgtactttg gagcctggcc ggccgtgcgc cgacggcccg gggcgcgtcc tggacagccc
     2161 aacgagcagg tcaacgggga acgagatggt tttcaacgac gtgatcgaga agatcgggat
     2221 gaccatcgat gccgccgggg tcgtggtcat cgtgaccggc gcggcgatcg cgttcgtggt
     2281 caccgccgtc cgcctctccc ggcgcgagag tgatgtctac cggcgtttcc gtcagcagct
     2341 aggccgggcc atcctgctcg gcctggagct gctggtggcc ggcgacatcg tccgcaccgt
     2401 cgccgcctca cccagtctga ccagcgtggc gatactggcc gcgatcgtcc tcatccgcac
     2461 cttcctgagc ttctcgctag agctcgagac aaccgggcga tggccgtggc agaaacgcga
     2521 catttccgcg tcttagatca agaacggccc cgcttgctgg ggaggcccgt gccagatccg
     2581 tgccagatgc agcgcgaaac gacggtcacc ggccgcccgc agctgaccca gatgcaggcc
     2641 aacctgggca gatgcgaggt agctgacgag cccgaaacga cctcctaagc caccggaatc
     2701 ctcgccgaga cgcccattcc aggcagaaaa ttggggagtg gccgttgccc gctgacgccg
     2761 actgttgctt gatcgccaag gtcgtttcta agccgggcgt gggagcaggg tctcggcaaa
     2821 gtggcgtagc gtccggttga ttgcctcgca cacggtctgg cattcctggt aggacgggga
     2881 cg
//
LOCUS       DASRPQ010000128         1016 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4400442, whole genome shotgun sequence.
ACCESSION   DASRPQ010000128 DASRPQ010000000
VERSION     DASRPQ010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4400442"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1014)
                     /locus_tag="VFD73_01490"
     CDS             complement(<1..1014)
                     /locus_tag="VFD73_01490"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI72705.1"
                     /translation="MEQQTARLGISAVTKFLGDLPADQARSHLLHADLALVTGRGDAT
                     GRPALEALIAGVPVVACWDSGGAVEIVPESGAGRLCLPSPEAMSECVLSLLADRDRLS
                     MARLVGEAWRARLAPDHVAELCAGCTGMPSADKLRILTVTHNYPRFPGDPAGAFVARI
                     ALGVVEQGHHVQVIAPHAPGLTFEEESGGVRVRRFRYAPDALERVAYTGGLHHTTLRS
                     PLAALAFPGFLAAFARAVRAAIREMRPDVIHAHWWFPAGWFVRHADVPYVITCHGSDV
                     RLLSKGSIVRLAARRVFTRATTVSTVSQFLAREVEHFLPGAARNLVVAPMPVDVERFS
                     QASA"
BASE COUNT          207 a          333 c          335 g          141 t
ORIGIN      
        1 ggctgacgct tgactgaatc gctctacgtc aaccggcatc ggcgcgacca caagatttcg
       61 agcggcgccc ggaaggaagt gttccacctc gcgggcaaga aattgggaga cggtgctgac
      121 ggttgtggct ctggtaaaaa ccctccgcgc ggccagccgc actatcgatc ccttggacag
      181 gagccgcacg tctgatccat gacaggtgat cacatagggg acatcggcgt gccggacgaa
      241 ccagccggcg ggaaaccacc agtgcgcgtg gatgacatcg ggacgcatct cgcgaatcgc
      301 cgccctgacg gctcgagcaa aggcagcgag aaacccggga aaggccaggg cagcgagagg
      361 agagcgcaga gtagtgtggt gaaggccacc ggtgtaggcc acccgctcga gcgcatccgg
      421 agcatagcga aagcgccgta cccgcactcc accactctcc tcctcgaagg tgagccccgg
      481 agcgtgcggc gcgatcacct gtacgtggtg tccctgctcg accacgccga gagcgattcg
      541 ggcgacaaag gcgccggcgg gatcacccgg gaatcgagga tagttgtgag tcaccgtgag
      601 aatgcggagc ttatcggccg acggcatccc ggtacagccg gcacagagct cagccacatg
      661 atccggcgcg aggcgggcgc gccaggcttc gcccaccagt cgggccattg acagccggtc
      721 gcgatcggcc aggaggctga ggacgcactc agacatcgcc tcgggcgagg ggaggcagag
      781 ccgtcccgct cccgattcgg gcacaatctc caccgcaccg ccgctgtccc aacacgccac
      841 gaccggcacg ccggcgatca aagcctccag agctggacgc ccggttgcat cgccccggcc
      901 cgtgaccagg gcgagatcgg catggagcag atggctgcgc gcctggtccg ccggcagatc
      961 acccaggaac ttcgtcactg ctgagattcc cagtcgagcg gtctgttgtt ccagca
//
LOCUS       DASRPQ010000129         1754 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_12387, whole genome shotgun sequence.
ACCESSION   DASRPQ010000129 DASRPQ010000000
VERSION     DASRPQ010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1754
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12387"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(284..682)
                     /gene="rplL"
                     /locus_tag="VFD73_01495"
     CDS             complement(284..682)
                     /gene="rplL"
                     /locus_tag="VFD73_01495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HZI72706.1"
                     /translation="MPATTLSNEEILEAIGNKTVVELAELIEAFKAKFNVTIAAAAAA
                     PAAGGGGGGAAPAAPAEEKTEWTVVLKEGGAKKIQVIKVVREITSLGLKEAKDAVDNA
                     PSNIKEGVSKAEAEEIKKKLEEQGAVVELK"
     gene            complement(711..1226)
                     /gene="rplJ"
                     /locus_tag="VFD73_01500"
     CDS             complement(711..1226)
                     /gene="rplJ"
                     /locus_tag="VFD73_01500"
                     /inference="COORDINATES: protein motif:HMM:NF000955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HZI72707.1"
                     /translation="MNKTERQQTVESLTEQLRASPNLYVTDFTGLNVLRMTEFRRRLR
                     AAGVSYVVVKNTLAQRALAANQVSSLDEHLAGPTGLILAGKDPIVAAKVLTDFAREFE
                     KPAIKIGLVDGKPVTADQVQRLATLPSKEVLLSQLAGAMQAPLAQLAGVMNGMLYQVV
                     GALEALRAQRS"
     gene            complement(1223..>1754)
                     /gene="rplA"
                     /locus_tag="VFD73_01505"
     CDS             complement(1223..>1754)
                     /gene="rplA"
                     /locus_tag="VFD73_01505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HZI72708.1"
                     /translation="HADQVVRGTVVLPHGTGKPVRVLVITQGDRVREAEAAGADFVGT
                     EYIQKIKDGWLDCDVIVATPDVMGQLGALGRVLGPRGLMPNPKAGTVTMDVSRAVREI
                     KAGKIEFRVDKSGNVHAPVGKVSFSKDQLAANVQAFMDTIVRVKPAAAKGTYIRSATV
                     SSTMGPGVRLETAGFK"
BASE COUNT          282 a          585 c          519 g          368 t
ORIGIN      
        1 gtctggaacg cggcggtctg gatatcgagc aagtgcggca tcggcatgcc gccctcgcgc
       61 ttactgaatg tgattaccga tcgggtctga ggcatcagtc actcactctc gcgcaacaca
      121 aatggcccca gcgcagaacc cgcggttctg gggctcgtaa aaaatcggga acggacggtc
      181 agagcttggt actttttcat tcgtctcact gaaataggtt gaaagcttgt cccgaaccgg
      241 aacgcgcaac gtgcgtcccg gcgagggatc tcgcgctttc cgcctatttc agttcgacga
      301 ccgcgccctg ctcttccagc ttcttcttga tttcctcggc ctccgccttg gacacgcctt
      361 ccttgatgtt gctgggggca ttgtccaccg catccttggc ttctttcaga cccaggctgg
      421 tgatctcgcg aaccaccttg atgacctgaa tcttcttggc gccgccctcc ttcaggacga
      481 cggtccattc ggtcttctct tccgccggcg cggccggggc ggcgccaccg ccacctccgc
      541 cggctgcggg agccgccgcg gcggccgcga tcgtgacgtt gaacttggcc ttgaacgcct
      601 cgatcagctc ggccagctcg acaacggtct tgttgccgat tgcctcgaga atctcttcgt
      661 tactcagcgt ggtagcgggc atcgatttgg tctctccatc cagtgatttg ttacgaacgc
      721 tgcgcgcgaa gcgcctcgag ggcgccgacg acctgataca acattccatt catgacgccg
      781 gccaactggg ccagcggggc ttgcattgct ccagccagct gcgacagcag aacttctttc
      841 gagggaagcg tggccaggcg ttgtacctga tcggccgtga ccggctttcc atccaccagg
      901 ccgatcttga tcgccggctt ttcaaactcc cgggcaaagt cggtcagcac cttggccgcg
      961 acgatcgggt ctttgccggc caggatgagg ccggtcgggc cggcgagatg ctcatccagg
     1021 ctggagacct ggtttgccgc cagtgcccgc tgtgccaggg tgttcttcac caccacatag
     1081 ctcaccccgg cggcccggag gcggcggcgg aactcggtca tccgcagcac gttgagcccg
     1141 gtgaagtcgg tgacgtacag gttgggcgag gcccggagct gctcggtcag gctctccacc
     1201 gtctgctggc gctcggtctt gttcatttga accccgccgt ctccagccgc acgccgggtc
     1261 ccatggtgct cgagaccgtg gccgaacgga tgtaggtgcc cttggccgcc gccggcttga
     1321 cccggacgat ggtatccatg aaggcctgca cgttggcagc cagctggtcc ttcgagaagg
     1381 acactttccc gaccggcgcg tgcacattgc cgctcttatc cacccgaaac tcgatctttc
     1441 cggccttgat ctcccggacc gcccgggaaa cgtccatggt cacggtcccc gccttgggat
     1501 ttggcatcag gcctctgggg ccgagcaccc ggccgagggc gccgagctgt cccatgacgt
     1561 ccggagtggc cacaatgacg tcacaatcca gccacccatc tttgatcttc tggatgtatt
     1621 cggtaccgac gaagtctgcc ccggcggcct cggcttcccg tacccgatca ccctgggtta
     1681 tcactaacac acgaacgggc tttccggttc cgtggggaag caccacggtg ccgcggacca
     1741 cctggtcggc gtgc
//
LOCUS       DASRPQ010000130         1397 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2527322, whole genome shotgun sequence.
ACCESSION   DASRPQ010000130 DASRPQ010000000
VERSION     DASRPQ010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1397
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2527322"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..676)
                     /locus_tag="VFD73_01510"
     CDS             complement(<1..676)
                     /locus_tag="VFD73_01510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72709.1"
                     /translation="MPAPASLSVLADRIAANLIHHEPGWRLPRQSALARRFNASAPEI
                     DAVLEELVDRHLIRRLPDGQLYRASPADYLIRLEGMPGLGSHIDPMGAVITCHSFHVS
                     ARRAPEKIALALGIGSESVCVARLTWTANGQPAALATTYLTSLPPGLALGEQPTSPAT
                     ALTVVPPALAEPNGQDERADGTGPFAVHAVSVEMLPPPPSVARTLRLSAGASATLITA
                     RFDHAAT"
BASE COUNT          221 a          433 c          482 g          261 t
ORIGIN      
        1 cagtggccgc gtggtcgaag cgcgcagtaa tcagagtcgc cgatgcgcca gccgacaggc
       61 gcagggttct ggctaccgat ggcggcgggg gcagcatctc gacgctcact gcgtgcaccg
      121 cgaacggccc cgtgccgtct gcgcgttcgt cttgcccgtt cggctctgct agcgctgggg
      181 gaaccaccgt cagtgccgtc gcggggctgg tgggttgttc acccagagcc agccctggcg
      241 gcaggctggt gagataggta gtggccagag cggctggctg gccgttggca gtccacgtca
      301 gccgggcgac gcagaccgat tcggatccga ttccaagggc cagggcgatt ttctcgggtg
      361 cacgacgggc ggacacgtgg aagctgtggc aggtgatcac tgctcccatg gggtcgatgt
      421 gcgagcccaa gccgggcatg ccctccagcc ggatgagata gtcggcgggg ctggcgcggt
      481 agagctggcc gtctgggagg cgccggatca ggtggcggtc gaccagttcc tcaagcacgg
      541 cgtcgatctc tggtgcgctg gcgttgaagc ggcgcgccaa agcgctctgc cttggcaggc
      601 gccacccggg ctcgtggtgt atgaggttgg cagcgatcct gtcggcgagg acggaaagtg
      661 aggctggggc tggcatcgtg ctgtcagcac cggtgagact gccggttctg gagcacgctc
      721 ctgcccggtg ctgcccgtat caaatcgcat cccacccact ggggcccgca ttcgcccgca
      781 tctgtcggca gcgtggccct cgccccgttc gctggcgccg ctgggagcgc cgctgcgtgg
      841 cccgcccccc aattgctagg agtccaaggt gatgcgcaga tgaacgacag gagaaccaaa
      901 ggtgacaatc agccgccagt taatcgacgc cagcctggcg gcttagcggc tcggtgtcct
      961 ccggcaagac ctttcaaaca cggcttcaag aacctgccga gcgtgctgca tgcccggcgg
     1021 cgccgggcgt ccctatgcag cgggtctcga atccaagccg gtcgtcggcc gacggaggtc
     1081 gcggtgctcc ggccgtacaa ggtgtgtgcc cagggtagtc ggcatatttg ctagcgtgat
     1141 atacccgggt agtcagcacg ctcggccgca actccgatgc cagcggtaat catggaaatg
     1201 ccggcactgg gttggccggg cagccgatgt tcgtaaccct ttaatcacct ttagttcact
     1261 ttctgttttt gtagctttca ccacctgttc cccacttctt aacttgcgag tacaggcagc
     1321 gcgccacact cgtcagggct agtacggttt gcatgcctgg cagggcgccc gggggggtct
     1381 ggtgctgatc gcaaccc
//
LOCUS       DASRPQ010000131         1369 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4087896, whole genome shotgun sequence.
ACCESSION   DASRPQ010000131 DASRPQ010000000
VERSION     DASRPQ010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1369
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4087896"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..216
                     /locus_tag="VFD73_01515"
     CDS             <1..216
                     /locus_tag="VFD73_01515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72710.1"
                     /translation="LARSAAELAAQSDLLSEHADIMLDLAHVLAAAGQILEAHASATR
                     ALDLYQRKGHLPGARESLRYLAQYAPA"
     gene            230..769
                     /locus_tag="VFD73_01520"
     CDS             230..769
                     /locus_tag="VFD73_01520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72711.1"
                     /translation="MPPSVNWQVPQVQLTGNNVVLTINVGGFSFGNWAEISGYIIQDD
                     VMAGDAIQQPGAIIPFSAIQAVPDPATGPSSVTVSIAAQGLDPDTDVRVITRVAEVQI
                     WPTGLQRDSQPAAGVTRWQARPGNPASNPQYHPQSIAPAPATTPAATVRVSGPDPRVS
                     VKNLRPGRQYHITVDEGPE"
     gene            858..>1369
                     /locus_tag="VFD73_01525"
     CDS             858..>1369
                     /locus_tag="VFD73_01525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72712.1"
                     /translation="MTQPYDVPATRYVIDNEIVQEKLGYLSELAGTWEGRGFNLIARP
                     DFHDKANLYLQLNQTHETLTVAPIGSPIPNRGFGQDDIELFGLSYLQKIHDHYTGGAL
                     HLEPGLWITQPPTTYPPENPPTGGQIIARMASIPHGTVVLAQGNAISFTGAPTLRPPD
                     GVMKYHGSLFP"
BASE COUNT          293 a          475 c          391 g          210 t
ORIGIN      
        1 ctcgcgcgct cggcggcgga actcgccgcg caaagtgact tgctcagcga gcacgccgac
       61 atcatgctcg atctcgctca cgtcctcgct gcggccggcc agatcctcga agcgcacgcc
      121 tcagccacgc gggcccttga cctctaccaa cgcaagggcc acctgccagg agcccgggaa
      181 tcactccggt acctggctca gtacgcaccc gcctgaaagg atcccaccca tgccaccctc
      241 ggttaactgg caagttcccc aggtccagct cacaggtaac aatgtggttc tcacaattaa
      301 cgtcggcggt ttcagtttcg gcaactgggc cgaaatatcg ggctacataa tccaggacga
      361 cgtaatggcg ggcgacgcaa tccagcaacc tggagcaatc attccctttt ccgccatcca
      421 ggcggtcccc gatccagcca cgggaccttc ttccgtcacg gtgagcatcg cagcacaggg
      481 gctggaccca gacacagacg tcagggtcat cacgcgggtg gcggaggtac agatctggcc
      541 caccgggttg cagcgagatt cgcagcctgc cgcgggtgtc acaagatggc aggcaagacc
      601 aggcaaccca gcctctaacc ctcagtatca cccccagtcc atcgcgcccg cgcccgccac
      661 cacgccggcc gcaaccgtgc gggtctccgg cccggacccg agggtctcgg tgaagaacct
      721 gaggcctggc aggcaatacc acatcacggt ggacgaaggc cccgagtgag ccggtggact
      781 aacacatagg cggttaattt cacgcctgcc tggcgcgggc cgctggcaga aggcgaggaa
      841 gcgagaaagg gggaacaatg acacagccct acgacgtgcc tgctacccgt tacgtaatcg
      901 acaatgagat agtccaggag aagctgggat acctctctga gctcgcaggg acatgggaag
      961 gccgcgggtt caatctcatc gcccggcccg acttccacga caaagcgaac ctctatctcc
     1021 agctcaacca gacccacgag acgctcacgg tcgcgccgat cgggtccccg ataccgaacc
     1081 ggggcttcgg gcaggacgat atcgagttgt tcggactgag ttacctgcag aaaatccatg
     1141 atcactacac cggaggcgca ctgcacctag agccaggcct gtggatcacc cagcccccga
     1201 ccacctaccc gcccgagaat ccgccaaccg gcggccagat catcgccagg atggcctcga
     1261 tcccgcacgg caccgtcgtg ctcgcgcagg gaaacgcgat cagcttcacg ggtgccccga
     1321 cgctgcgtcc gccggacggg gtcatgaaat accacggctc gttgttccc
//
LOCUS       DASRPQ010000132         1428 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1897497, whole genome shotgun sequence.
ACCESSION   DASRPQ010000132 DASRPQ010000000
VERSION     DASRPQ010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1428
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1897497"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..261
                     /locus_tag="VFD73_01530"
     CDS             <1..261
                     /locus_tag="VFD73_01530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72713.1"
                     /translation="LKIVIVDGVYTVKGSTNWSLSGEQQQDNELTLSRNAVIAAETRA
                     ILDLNHDFMLKQMVGTKLDVTKLQAPTTSTAMPPLPPAPVAP"
     gene            complement(307..>1428)
                     /locus_tag="VFD73_01535"
     CDS             complement(307..>1428)
                     /locus_tag="VFD73_01535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72714.1"
                     /translation="GLAVVAGVALTGPAWKEVPVSASSGGLAITASGAADSGLEALLN
                     AGGADSAAPARHTSESPALVAAAAGADDQQFYQLGELLVRDRLSSAIINLSREMNGWW
                     YEWSEWHAPSYELDAFIRAWRHVVTAMRSVPGEHFKFLWTIYPEGATVAECWPGSGYV
                     DYVGTDIFDWHGGPHGTYPHTASGTLYWAGHWQQTLTAVPGGLDWIARFSRLTGKPII
                     IPEWGLDFHAFGGQDDTYFLTQMTAWLKAHHAIGLYWSGVHVASSGWPGGPLLAAQGA
                     AAQDNTPGAVDGMGKLLGGHLQYAGVYLPDQATISDASAQPVLAPWENAGYQLVLSVD
                     IIPNPPVIKSYSGPPEPGNKPYQLSNYPDAVAALKHGTG"
BASE COUNT          282 a          479 c          436 g          231 t
ORIGIN      
        1 ctgaagatcg tgatcgtcga cggcgtctac acggtcaagg gctctaccaa ctggtccttg
       61 tcgggcgagc agcagcagga caacgagctc accctgagcc gcaacgcggt gatcgccgcc
      121 gaaacccgcg ccatactcga cctgaatcac gacttcatgc tcaagcagat ggtcggcacc
      181 aagcttgacg tgacaaaact ccaggccccc accacaagca cagccatgcc accgctgccc
      241 ccggccccgg tggcaccata agtccgacag aaaccgatag ccgccgggag atcttcgcct
      301 cgataatcac ccggttccgt gcttgagcgc agctaccgcg tcagggtagt tggaaagctg
      361 gtagggctta ttcccgggct cgggcgggcc ggaataggat ttgatgacag gcgggttcgg
      421 aatgatatcg acgctcagga ccagttggta gcccgcgttt tcccacggag ccagaacagg
      481 ctgcgcgctg gcgtcggaga ttgtcgcctg gtctggcagg tacacccccg cgtactgcag
      541 atgcccgccc agtagcttcc ccatgccgtc gaccgcgcca ggggtgttgt cttgcgccgc
      601 cgcgccctgg gcagccagca acgggccgcc aggccagccg gacgaagcaa cgtggacccc
      661 tgaccagtac aggccgatag cgtgatgagc cttcagccat gccgtcatct gggtcaggaa
      721 gtacgtgtcg tcttgcccgc cgaaggcgtg gaagtccagg ccccactcgg ggatgatgat
      781 gggcttgccg gtaagcctgg agaaccgggc tatccagtcc agtccgcccg ggacggcagt
      841 cagggtctgc tgccagtgac cagcccagta gagcgtgccc gatgcggtgt gcggatacgt
      901 cccgtggggg ccgccgtgcc agtcgaagat atcggttccc acgtagtcga cgtaaccgct
      961 accgggccag cactccgcta ccgttgcccc ctctgggtaa atggtccaca agaacttgaa
     1021 atgctcaccg ggcaccgatc gcatggccgt gacgacgtgc cgccaggcac ggatgaaagc
     1081 atcgagttca tatgacgggg catgccactc gctccactcg taccaccagc cgttcatctc
     1141 gcgactgagg ttaataatgg cgctggagag cctatcccgt accagcagct cacccagctg
     1201 gtaaaactgc tggtcatcag cgcccgccgc cgccgcgacc agagcagggc tctccgacgt
     1261 atgacgggcg ggcgcggcgg aatctgcccc gccagcgttc aacagcgcct ccagcccgga
     1321 atccgcagcg ccagacgccg tgatggctag cccgcccgag ctggccgata caggtacttc
     1381 tttccacgca ggcccggtca aggcaacgcc ggcaaccacg gcaaggcc
//
LOCUS       DASRPQ010000133         3092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3778069, whole genome shotgun sequence.
ACCESSION   DASRPQ010000133 DASRPQ010000000
VERSION     DASRPQ010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3092
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3778069"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..914)
                     /gene="prfB"
                     /locus_tag="VFD73_01540"
     CDS             complement(<1..914)
                     /gene="prfB"
                     /locus_tag="VFD73_01540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_319006963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HZI72715.1"
                     /translation="MTGKGERLQTLEAEQASPGFWADPEAARASVQEIKSLKNWLTPY
                     DTLHHRLQGALEMAELLEAEPDAGLDADLVTEADEIERATEAFELQAMLQGPEDARDA
                     LLTIHPGAGGTESQDWAEMLMRMYVRWAERHGFEVSVLDLLPGEEAGIKSVSIEIRGQ
                     YAYGYLKAEKGVHRLVRISPYDSQARRHTSFASVFVYPDIDDTIEIDLRDEDIKMDVF
                     RASGAGGQHVNKTSSAVRLTHIPTNTVVSCQQERSQTKNRATAMKMLRAAIYQKKLEE
                     QEAARAAVEATKTDNSWGNQIRSYVFQP"
     gene            complement(1041..1271)
                     /locus_tag="VFD73_01545"
     CDS             complement(1041..1271)
                     /locus_tag="VFD73_01545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72716.1"
                     /translation="MKARRLARALISDMVVYHPGKRQEGLRDGNLKALFEEEIKKSWE
                     EYADQVGREIADSTPYFREALNEILAGGRQIF"
     gene            1397..1561
                     /locus_tag="VFD73_01550"
     CDS             1397..1561
                     /locus_tag="VFD73_01550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72717.1"
                     /translation="MPLRLETPRRARALGGGLLEAEWQLGAPVLPLVPRGVPPLGSRL
                     KRPVGRERLG"
     gene            complement(1935..2918)
                     /locus_tag="VFD73_01555"
     CDS             complement(1935..2918)
                     /locus_tag="VFD73_01555"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HZI72718.1"
                     /translation="MRTRPTILFFSPDGCPVPVLVRQWAGVHSFPLLAFREPADVESI
                     VLRGHPCLLFIDADSSPQVGLGLVRRLKSDAFTAIVPVTAMAGSHQPDQVQAWFASGA
                     DEVITGLFAPAEQRSRLDAMLVRTERDVSVHPSTRLPGTTEIEREIRRRLESNQEFAV
                     CYADLDHFKEFNDRYSYYEGDRVIYILSRILHDVVKGLLGAKGFVGHIGGDDFIFVIP
                     AADISPVCTEILEVFDGLVPLQYNDQDRRAGYFFGKDRRGQLHRVPLMTLSIGIVTNR
                     HRRFAHPAQVSELATEMKSYAKTLPGSVFVVDRRHSTNGEERTGERSREKP"
BASE COUNT          543 a          952 c          990 g          607 t
ORIGIN      
        1 tacggctgga acacgtacga acggatctgg tttccccagg agttgtctgt cttggtagcc
       61 tcgaccgctg cccgagcagc ttcctgttct tccagttttt tctgatagat cgccgctcgc
      121 aacatcttca tggcggtcgc ccggttcttg gtctgactcc gctcctgctg acaggatacg
      181 accgtgttgg ttggtatatg ggtcagccgt accgccgatg aagtcttgtt gacgtgctgg
      241 ccgcctgctc ccgacgcgcg aaatacatcc atcttgatgt cctcgtcccg aagatcgatt
      301 tcgatcgtgt cgtcgatgtc gggatagacg aacaccgagg caaacgaggt gtgacgccga
      361 gcctgggaat cgtagggaga aattcgcacc aggcggtgaa cacccttttc cgccttgagg
      421 tatccgtagg cgtattgtcc ccggatctcg atcgagaccg acttgattcc ggcttcttct
      481 ccgggcagca ggtccaagac ggagacctcg aatccatgcc gctcggccca ccgcacatac
      541 atccgcatga gcatctccgc ccaatcctgc gattcggttc cgccggcacc aggatgaatg
      601 gtgagcaagg cgtcccgggc gtcttcgggt ccctgcagca tggcctgaag ctcgaacgcc
      661 tcggttgcgc gctcgatctc gtcggcctcg gttacgagat cggcgtcaag gccagcgtcc
      721 ggctctgcct cgagcagttc agccatctcg agagcgcctt gcagtcggtg atgcagcgtg
      781 tcgtaagggg tgagccagtt cttcaggctc ttgatctcct gcaccgaggc acgggcggct
      841 tcagggtccg cccagaagcc gggggatgcc tgttcggctt cgagcgtctg cagccgctcg
      901 cctttgccgg tcaggtcaaa gaaagtctcg gagttcggcg acccgccgct gcaggtcggt
      961 cagtcggtcc accagctcgg acatccagtc tccaggaaga ggatagactg aaaactaatg
     1021 gggagggatg aggtcccgcc ttagaagatc tgacgcccgc ctgccagaat ctcgttcagt
     1081 gcctcgcgga aatatggcgt cgagtccgct atctcacgtc caacctggtc ggcgtactcc
     1141 tcccagctct ttttgatctc ctcttcgaac agtgctttca gatttccgtc tcgcaatcct
     1201 tcctgacgct ttcccgggtg atagacgacc atgtctgaga tgagggcccg agcaagacgc
     1261 cgagccttca tcgctggatc ctgtgacaag aaggggttgg tggggcgact gcctgtcgcc
     1321 gcgctcgacg gccctcgcga ggcagcgggg ctggccggtg cagccgcggc gggggccgcg
     1381 ggtttgggcg gagcgggtgc cgctgcgact ggagacaccc cggcgggcgc gggccctggg
     1441 cggggggctg ctggaggcgg agtggcaact gggcgcaccg gtgctgccgc tggtgccccg
     1501 gggggtaccg ccgcttgggt cgaggttgaa gcggcctgtc gggcgggagc ggctggggta
     1561 actggccgcg gggccggtgg gcgcggtggc gctgcgttca gcggtgccgc cgcggccgcg
     1621 gctggtgcgg gggatactgg agcaggcgct gaggcaccta gcggcgcggg cgctggggcc
     1681 gctggcgggg gcgccggtgt ctgagcaaca gcagtctggg accgcgcggg ctctgacgtc
     1741 gatacgctct tcttcggctc ttgcgagctc tgggttaccg gcgccttgac cgcttcgggc
     1801 tcaccttcac ggcgcacagc gaacaccgca ctgcagacgt tgcaacgcgc ccggactcca
     1861 gcaacgggga ctttggcggg gtcgacccga tacaccgtcg cacaattcgg acaggtgacg
     1921 ttcatctcat ctcctcaagg cttctcccgc gagcgctctc cggttcgctc ctcaccgttc
     1981 gtgctgtggc ggcggtcgac gacaaagacc gagcccggca gcgtcttggc gtagctcttc
     2041 atttcagtgg cgagctcgct cacctgtgcc ggatgagcga atcgccgatg tcgattggtc
     2101 acgatgccga tcgacagtgt catgagtgga acccggtgta gctggccgcg ccgatctttt
     2161 ccgaaaaagt agccggctct tcggtcctgg tcattgtact ggagtgggac caggccatcg
     2221 aacacctcca agatttcggt gcacacggga ctgatgtcgg ccgccggaat aacgaagatg
     2281 aaatcgtcgc ctccgatgtg ccccacaaag cctttcgccc ccagcagtcc cttcacgaca
     2341 tcatgaagga ttcgcgacag gatgtagatg acccgatcac cctcgtagta gctgtacctg
     2401 tcgttgaact ccttgaagtg gtccagatcg gcatagcaga cggcgaattc ctggttggac
     2461 tccagccgcc ggcggatctc gcgttcgatc tcagtggtgc ccgggagccg ggtcgaggga
     2521 tgcaccgaga catcgcgttc cgtccgcact agcatggcat ccaggcgcga tctctgttcg
     2581 gccggtgcaa agagcccggt aatgacctcg tcggccccgg acgcgaacca agcctggact
     2641 tggtccggct gatggcttcc agccattgcc gtgacgggga cgatggccgt aaaggcgtcg
     2701 ctcttgagcc gccggaccag acccaggccg acctgcggtg aactgtccgc gtcgataaac
     2761 aacaggcagg gatgtccccg gagcacgatg gactcgacgt cagcaggctc acggaaggcc
     2821 agcaatggga atgagtggac cccggcccat tgtcgtacca ggaccggcac cggacagccg
     2881 tccggcgaaa agaagagaat cgtcgggcga gtccgcaccc acaacctttc gtaacgagtt
     2941 atgcctggct aacttagggc tcacctgccg gtaagtcaaa ccagatagaa tgctcccacc
     3001 gccatcatgc cgtagactgc aagaagctgc actccctcga accaatgtga ctctccatcg
     3061 agggtaatga tggccgtgac cagggttgcc ag
//
LOCUS       DASRPQ010000134         1054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4087992, whole genome shotgun sequence.
ACCESSION   DASRPQ010000134 DASRPQ010000000
VERSION     DASRPQ010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4087992"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..419
                     /locus_tag="VFD73_01560"
     CDS             <1..419
                     /locus_tag="VFD73_01560"
                     /inference="COORDINATES: protein motif:HMM:NF025007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cupin-like domain-containing protein"
                     /protein_id="HZI72719.1"
                     /translation="DFSCDERFLDAAAAARRVFFWFGPAGTVTPLHHDVSNILLVQVR
                     GTKRVTLVPALESHLMYNDVAVYSPVNAEFPDEQRHPRFSTATRLTVDLHEGEALFIP
                     VGWWHHVRSLEICISLSFTNFAFPNHFDWSFPNIVR"
     gene            complement(456..830)
                     /locus_tag="VFD73_01565"
     CDS             complement(456..830)
                     /locus_tag="VFD73_01565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72720.1"
                     /translation="MTPLYLRNTGDSPMQVTYSANPGYAMSWLKASPVEILPGEAASI
                     PLTLVVPPNAGPAEAYVILTAGGAHFDVRFSVGVPPPSQCLAAGYKPPPGTSPFVFLW
                     LIVPVVIILAAVLVWRRLAGRL"
BASE COUNT          191 a          333 c          333 g          197 t
ORIGIN      
        1 ccgatttcag ctgcgatgaa aggtttctcg acgccgcggc cgcggcacgg cgcgtgttct
       61 tctggttcgg ccccgccggg acagtgacgc cgcttcacca tgacgtctcc aacatcctcc
      121 tggtgcaggt ccgcggcaca aagcgcgtta ccctggtgcc tgcactggag tcgcacctga
      181 tgtacaacga cgtcgccgtc tacagcccag tcaacgccga gttcccggat gaacagcgac
      241 atccaaggtt cagcactgcg acccggctga ctgtggacct gcatgagggg gaagcgctct
      301 tcattcccgt cgggtggtgg catcacgtgc ggagcctgga gatatgcatc agcctctcat
      361 tcacgaactt cgcgtttcct aaccatttcg actggtcgtt cccgaatatc gtgcgataga
      421 cggcagtccg ccgtgcggga gattcgcgaa ggatttcaca gtcttcctgc cagcctgcgc
      481 cataccaaga cggccgcgag gatgatcacc acgggaacga tcagccacaa gaacacaaag
      541 gggctggttc ccggcggggg cttatatcct gccgcgaggc actggctggg aggggggacc
      601 ccgacgctga acctgacgtc gaagtgggct ccccccgccg tcaggatcac gtaggcttcc
      661 gcgggacctg cgttcggcgg gaccaccagg gtcagcggga tgctcgcagc ttccccgggg
      721 aggatttcca ccggggaggc cttcagccac gacatggcat accccgggtt ggccgagtac
      781 gtgacctgca tcggggaatc ccccgtgttc ctcaggtaca ggggagtcat cgggtagctg
      841 tgcccggggg aggctgagcc ccggatgcag atcaacgggt tcacgtcttc ctcgcagtcg
      901 gttgcccgga accccacatc ccggactgca acgctcccta ctgctatatc cactggcgcg
      961 tgtctgagtc catcggggga aacctgggcg gaaggtggcc ttggtgcagg actataggcc
     1021 aatgggccat gagccggctg gcgctgattt cagc
//
LOCUS       DASRPQ010000135         2271 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3460862, whole genome shotgun sequence.
ACCESSION   DASRPQ010000135 DASRPQ010000000
VERSION     DASRPQ010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2271
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3460862"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(118..1287)
                     /locus_tag="VFD73_01570"
     CDS             complement(118..1287)
                     /locus_tag="VFD73_01570"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HZI72721.1"
                     /translation="MRACQLLRPLGLSLIAVLSASTCSSRSEAGQPSGTGARLQQIAS
                     GLSSPLYLTAPPADSSRLFVVEQTGAIRIIKDGAVLPTPFLDVSGEITSGGEQGLLGM
                     AFDPSYASTGRFVVHYTDKAGNTHLSMFTVSSNPDVADPATEQVILTAQQPFSNHNGG
                     QVLFGPDGFLYLGLGDGGSEGDPQGRGQDRSDLLGSILRIDVHGAAPYAVPPDNPFVG
                     QSGVQPEIWSYGLRNPWRFSFDRATGDLYVADVGQDSYEEVDVMPAARGAGKGANFGW
                     NIMEGKHCYNASSCTQNGLTLPVYEYTHGEGCSITGGYVYRGAALPALQGLYFFGDFC
                     QGWVRSFRYQAGAATELTDWQSLRPGGMITSFGEDAAGELYIIVQGGSVFKVVPE"
     gene            1321..1785
                     /locus_tag="VFD73_01575"
     CDS             1321..1785
                     /locus_tag="VFD73_01575"
                     /inference="COORDINATES: protein motif:HMM:NF015147.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LEA type 2 family protein"
                     /protein_id="HZI72722.1"
                     /translation="MRVVCTRVVWILSVMGCTPLGLWIYEDPVVTVARISFELRQSAS
                     VQAPLVVALAVKNRNDYPLSAEQVELSLRLDGIPVGEIKRDSSVSLATDTVSTVALPL
                     PMAKPANPGQLRSGVHTFAVQGRAIFRTPIGTRKVRFAQEGSMVFGQRLGRS"
     gene            complement(1780..>2271)
                     /locus_tag="VFD73_01580"
     CDS             complement(1780..>2271)
                     /locus_tag="VFD73_01580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72723.1"
                     /translation="VNRPAAPLPRCPPDWFDDLPPAIPVLKEYSPERRRREECDILGF
                     ITDAHPMQLHAERLRQYRLCPSTELHRYVGRPVLAAGMLTTAKPVHAKTEEPMEFVTF
                     DDGYGLIEAVLFPQVYRERGHVLFDQGPFIFRGKVEEEFGAVTLTLTHLERLERTRTP
                     ARL"
BASE COUNT          430 a          687 c          727 g          427 t
ORIGIN      
        1 cgcgccatcc cggataattc caggtgctgg tcccgaatcg gatcgaggct ggaattcgtg
       61 ctccgagctg ctcgaaccga ctgaggttct gaccctgcgc tgcgatgtcg cccacgatca
      121 ttccggaacg accttgaaca cgctgccacc ctgcacgatg atgtacagtt cgcccgccgc
      181 atcttcgccg aagctggtga tcatgccgcc gggacgaagg ctctgccagt cggtcagttc
      241 agtcgcggcg cctgcctgat agcggaagct tcggacccac ccctgacaaa agtctccgaa
      301 gaagtagagg ccctgcaagg cggggagcgc ggcgccgcga tagacgtacc ctcccgtgat
      361 cgagcaccct tcgccgtgag tgtattcgta caccggaagg gtgagaccgt tctgggtaca
      421 tgaggatgca ttgtagcagt gcttgccttc catgatgttc cagccaaagt tggcgccctt
      481 accggcgccc ctcgctgccg gcatcacatc cacctcctca taactgtcct ggccgacatc
      541 ggccacgtac agatcgccgg tggcacgatc gaagctgaag cgccaggggt tcctgaggcc
      601 gtaactccag atctccggct ggacgcccga ttgcccgacg aacggattat cgggaggtac
      661 ggcatagggc gcggctccat ggacatcgat tcgcaggatg gacccgagca gatcgctccg
      721 gtcctggccg cgaccctgag ggtcgccctc tgatccacca tccccgagcc caaggtagag
      781 gaatccatcg gggccaaaga gcacctgccc gccgttgtgg ttgctgaacg gctgctgggc
      841 cgtcaggatc acctgttcgg ttgcgggatc tgctacgtcg ggattgctgg acacggtgaa
      901 catcgagaga tgggtgtttc ccgccttgtc ggtatagtgg acgacaaagc gtccggttga
      961 ggcgtacgat ggatcgaacg ccataccgag caacccctgc tcgccgccgg aggtgatctc
     1021 tccactgaca tccaggaacg gggtcggaag aaccgcgccg tctttgatga tccggatggc
     1081 tccggtctgt tctactacga acagccggct cgaatcggca ggcggtgcgg tcagatacaa
     1141 cgggctgctc aggccggagg cgatctgctg tagccgagcg ccggtgccgg aaggctgacc
     1201 ggcttcggat cgtgagctac aggtactggc gctcaggacg gcaatgagcg agagtccaag
     1261 gggtcggaga agctggcagg cacgcatatc ggttgcaatt caatgaggtc gggtgagtcg
     1321 atgcgggtcg tctgtactcg agtggtatgg attctctcgg ttatgggctg tacgccgctg
     1381 ggcctctgga tatatgagga tccagtggtg acagtggctc gaatcagctt cgagctcagg
     1441 cagtccgcct cggtgcaagc tccccttgtt gtcgcgctgg cggtgaagaa tcgaaatgat
     1501 taccccctct cagccgagca ggtggagctg tcgttgcggc tggacggcat accagtcggc
     1561 gagatcaagc gagacagcag cgtctcgctg gcaaccgata cggtatcaac cgtggcgctg
     1621 ccccttccga tggccaaacc ggcgaatcct gggcagctcc gctcgggggt ccacaccttc
     1681 gcggtgcaag ggcgggcgat attccgaacc ccgatcggaa cccgcaaagt ccggtttgcc
     1741 caggaaggat ccatggtgtt cggtcagcga ctcggccgct cataggcggg ccggcgtccg
     1801 ggtgcgctcc agccgctcca ggtgcgtcag cgtcagtgtc accgctccaa actcctcctc
     1861 caccttgccc cgaaagatga acggtccctg gtcaaacaag acgtgaccac gctcacgata
     1921 gacctgggga aagagcacag cctcgatcaa gccgtagcca tcgtcgaagg tgacaaactc
     1981 catcggctct tcggttttgg cgtgaaccgg cttggcggtg gtcagcatac ctgctgccag
     2041 taccggtcgg ccgacgtacc ggtgcaactc ggtgctgggg cagagccgat actgccgcaa
     2101 acgctcggcg tgcaactgca tcgggtgggc atcggtgatg aagcccagga tgtcacattc
     2161 ctctcgccgg cggcgctcgg gcgagtattc ctttaatacc ggtatcgccg gcggaagatc
     2221 gtcgaaccaa tcaggggggc agcggggcag tggggcggcg gggcggttca c
//
LOCUS       DASRPQ010000136         1064 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1897768, whole genome shotgun sequence.
ACCESSION   DASRPQ010000136 DASRPQ010000000
VERSION     DASRPQ010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1897768"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(193..489)
                     /locus_tag="VFD73_01585"
     CDS             complement(193..489)
                     /locus_tag="VFD73_01585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72724.1"
                     /translation="MRTHFPDLEAKAPARHVMTNWEPTLDELLGEPIVRQLMARDGVT
                     EPAMRSLASRIGERRGSASERGRTAPRASEQRERVKAHLRAVLKRLNERLRQRT"
     gene            complement(560..919)
                     /locus_tag="VFD73_01590"
     CDS             complement(560..919)
                     /locus_tag="VFD73_01590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72725.1"
                     /translation="MFPSRTVCGLLLAILALISALDGYAAYAAPIFKKAGYAQPSQAK
                     AVLALMAPAVSDDDDDGHSPELGHAPPPLISEPLAPAALFSQDEAWDVKARPAGEIVQ
                     HPPCAVPQTGPPAHATA"
BASE COUNT          168 a          343 c          366 g          187 t
ORIGIN      
        1 gcccgaccta atggcactaa cggcactatt ggcacgccac tcctgtagag agttcagagg
       61 gggttgagag cccgcgcaac ccgctctgct ccggcgcttg cggctccaca tgaggcgctg
      121 gctcggctcc tgacgcgatt ggctgctgga tagagcggcc ctcgaggggg gcgagccctc
      181 ggccgcgcac ttctaggttc gctggcgtag ccgctcgttg aggcgcttca gcaccgctct
      241 gagatgcgcc ttcacgcgct cccgctgctc ggatgcgcgt ggggctgtcc tgccccgctc
      301 tgaggctgag ccacggcgct cgccaatcct gctggcgagc gagcgcatcg cgggctccgt
      361 gacgccgtct cgggccatca actgccggac gatcggctct cccaggagct cgtccagggt
      421 cggctcccag ttggtcatga catgacgggc aggcgctttg gcctctaggt ccggaaagtg
      481 cgttctcatg gggtgctcca cgcgaaaggg ccagggccga aggggttcgg cccgatgcgc
      541 gtccagggct ggtggacgcc taggcggtcg cgtgagcagg aggtccggtc tggggaacag
      601 cgcagggtgg atgctggacg atctctccag ctggacgcgc cttcacgtcc caggcttcat
      661 cctggctgaa gagcgctgct ggcgctagcg gctcggagat gagcggcggt ggcgcatggc
      721 cgagttcggg gctgtggcca tcatcgtcat catcgctgac cgctggagcc ataagcgcca
      781 gcacggcctt ggcctgcgaa ggctgggcat agccggcttt cttgaagatc ggggctgcgt
      841 aagcggcgta gccgtccagc gccgagatca gcgccaggat ggccagaagg agcccgcaga
      901 cggtacgaga gggaaacacc ggcacccttt cgatgtccca gcagcagacc ttctacccca
      961 ctgccattct caccgcaaag gatcgagcag ccgcgaggtt gcgagatagg accgcaggtg
     1021 ccgattttgg gccgcccttg cttcccatgc gcttcccaac ccgg
//
LOCUS       DASRPQ010000137         1949 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_640605, whole genome shotgun sequence.
ACCESSION   DASRPQ010000137 DASRPQ010000000
VERSION     DASRPQ010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1949
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_640605"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            476..1807
                     /gene="ltrA"
                     /locus_tag="VFD73_01595"
     CDS             476..1807
                     /gene="ltrA"
                     /locus_tag="VFD73_01595"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: protein motif:HMM:TIGR04416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZI72726.1"
                     /translation="MGNLATPKSVQKLQTALHAKAKAEAGYRFYALYDKISRDDILAH
                     AYAQCRSNKGAPGIDGQDFAEIEAYGVERWLAELALALRQETYRPEPIRRVFIPKANG
                     KLRPLGISSVRDRVCMTATLLVLEPIFEADLPPEIYAYRVARNAQQAVVEVEELMFRG
                     HPDVVDADLADYFGSIPHADLLKSVARRIVDRRVLHLIKMWLECPVEETDQRGRTTRT
                     TEARDSRRGIPQGSPLSPLLANLYMRRFVLGWKKLGLEQSLGTRLVTYADDLVILCRR
                     GSAENALHHLREIMGKLKLTVNEEKTRICRVPDGEFDFLGYTFGRMYSPETGKARLGY
                     RPSKKSIKRMVERVHALTDRAGTWQGTTRLVDQLNQALRGWANYFSVGTTRKAYRVLD
                     NYTALRLRRWLRFKHKVWRRKGGAYPLPHLYEHFGLVRLTQLGRGPSWVKA"
BASE COUNT          423 a          553 c          660 g          313 t
ORIGIN      
        1 gcgctttcca gtgggtgcaa ggcccacccg gcgattcgct ccagccggaa gcaatcggag
       61 cagtcatgga ggtaacgaaa tggctgaagc cttcgaatag cggtcacgac ttggtgaccg
      121 cgcgagtgtg caggccgcaa cacgagtgaa cgccgagcaa acctcgaaaa ggtcgatgtg
      181 caggccgact cgactgccga atcggggaag gctgatacgg ccgggtgaga tgagcgagga
      241 ttacgcccag ccgctgcacc ggggtactgg cggcggcatg tacacaagga aagcgcacgc
      301 aacacgggaa gccccactgc gtgatcaggg atgatcaacc ggacgcccgt gagggacagg
      361 ccgggcgcac tggggtggcg gagaggcccg tagtaccgat gaagccgggt aatgccgggg
      421 gagggaaggg gcctcagttc aagacagacg caagacgtgg tgagggacct ggagattggg
      481 caacctagca actccgaaaa gcgttcagaa actgcagacg gcgttacacg cgaaagctaa
      541 ggcagaagcc ggctatcggt tctacgctct gtacgacaag atcagccgcg acgacattct
      601 ggcgcatgcc tatgcccagt gccgctcgaa caagggcgcg ccggggatcg atggccagga
      661 cttcgcggaa atcgaggcat acggggtcga gcgatggctg gctgaactgg cgcttgcgct
      721 caggcaggag acctaccggc cagagccaat cagacgagtg tttataccga aggccaacgg
      781 caaactcaga ccgctgggca tctcgagcgt gcgggatcgg gtctgcatga cagccacgct
      841 gctcgtgttg gaaccgatct tcgaagccga tcttccgccg gaaatctacg cctaccgcgt
      901 tgcgcgcaac gcccagcagg cagtcgtaga ggtggaggag ctaatgttcc gtggtcaccc
      961 ggacgtcgtc gacgccgatc tcgcggacta cttcgggagc attccgcacg ccgacctcct
     1021 aaagtcggtg gcgcgtcgga ttgttgaccg gcgcgtgctg catctgatca agatgtggct
     1081 ggaatgtccc gtggaagaaa ccgaccaacg gggccggacg acacgcacga cggaggcccg
     1141 ggacagccgg cgaggcatcc cgcagggctc accgctctca ccactgctgg cgaacctgta
     1201 catgcgccgg tttgtgctgg ggtggaagaa gctcggcctt gagcaaagcc ttggcactcg
     1261 cctcgtcact tatgcggatg accttgtgat cctgtgccga aggggcagcg cggagaacgc
     1321 actgcaccat ctgcgcgaga tcatgggcaa gctgaagctg acagtgaatg aggagaagac
     1381 acggatctgc agagttccgg acggggagtt tgacttcttg ggctatacgt ttgggcggat
     1441 gtactctccg gagacgggca aggcccggct gggctaccga ccgtcaaaga agagcatcaa
     1501 gcgcatggtc gaaagggtcc acgcgctgac cgaccgagcg ggtacttggc aggggaccac
     1561 aaggctggtg gatcagttga accaggcgct ccgcggatgg gccaactact ttagcgttgg
     1621 aaccacccgc aaagcgtatc gggtgctcga caactacacg gctctgcggt tgcgccggtg
     1681 gttgcgcttc aagcacaagg tctggcgacg caagggcggg gcttatccac tcccgcacct
     1741 ttacgagcac ttcggcctcg tacgcctgac ccagcttggt cgtggcccgt cgtgggtgaa
     1801 ggcgtgacgt cttgtccgag agccggatgc gggcaatccg ccagtccggt tcgatgagcg
     1861 ggatgtggaa acggagccac ggccgaacca gtgaggcacc gccagacgaa aggggcggct
     1921 acagatatgt tcgacctaca gccaccgcg
//
LOCUS       DASRPQ010000138         1129 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1897940, whole genome shotgun sequence.
ACCESSION   DASRPQ010000138 DASRPQ010000000
VERSION     DASRPQ010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1897940"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..846
                     /locus_tag="VFD73_01600"
     CDS             <1..846
                     /locus_tag="VFD73_01600"
                     /inference="COORDINATES: protein motif:HMM:NF014869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M4 family metallopeptidase"
                     /protein_id="HZI72727.1"
                     /translation="GGQANRTIYDQQHATDQSPGTAVRAEGQPAVADQAVNQAYDGLG
                     ATYDYYWSVFQRDSIDGQGLPMLGCVHFGTNYDNAFWDNAGHMFFGDGDGTLLTETTA
                     GIDVIGHELTHGVTQHEANLTYSGQSGALNESISDVFGIQVKQRALNQDVTQSDWLIG
                     EDIVGSELRPALRSMKDPGTANPHDQQPADMDHYIPGGDVHLNSGIPNKAFYVVATTL
                     GGHAWDAAGPIWYLTLCDPALHQGATFAQFAGLTLKHTQRKYGRASNEVNAVQAGWDA
                     VKVPV"
BASE COUNT          234 a          371 c          334 g          190 t
ORIGIN      
        1 ggcggccagg ccaaccggac catctatgac cagcagcatg cgacggatca gtcaccgggc
       61 accgcggtcc gcgccgaggg gcaaccagct gtcgccgacc aggcggtgaa ccaggcctac
      121 gacgggctgg gcgccacgta cgactactac tggtcggtct tccagcgcga ctccatcgac
      181 gggcagggcc tcccgatgct cggatgtgtg cacttcggga ccaattacga caatgccttc
      241 tgggacaacg cggggcacat gttcttcggc gacggcgacg ggacgttgct caccgagacc
      301 acggccggca tcgacgtcat aggccacgaa ctcacccacg gagtcacgca gcacgaggcc
      361 aatctgacgt actcggggca gtctggtgcg ctgaacgagt ccatctcgga tgtcttcggc
      421 atccaagtca agcagcgtgc actcaaccag gacgtgaccc agtccgactg gctgatcggc
      481 gaagacatcg tcgggtcgga gctacggcca gcgctgaggt ccatgaagga cccgggcacc
      541 gcgaatccac atgatcagca gcctgcggac atggatcact acattcccgg cggggacgtt
      601 caccttaact ccgggatccc aaacaaggcc ttctacgtgg tcgccaccac tctaggtggc
      661 cacgcctggg acgccgccgg gccgatctgg tatttgaccc tctgtgaccc tgcactgcac
      721 caaggtgcca cgtttgcgca attcgctgga ttgacgctca agcacaccca gcggaagtac
      781 gggcgcgcca gcaacgaggt caacgccgtg caagccggct gggacgccgt caaggttccg
      841 gtataggcag gaaaggccag cctgagcggc ggccgcgccg tcacttttgt ctctgcatta
      901 acggaattaa actagagccc ccgccattat cagcaggctg ccaagatcac tgactcacca
      961 gagccgcttc ctgcacgtca gcttgttcga tatcacaagc cacttgggcc acttggctcc
     1021 cagtccgacc tggtcgtctg cagcggatgg cgatagggcg ccgcaacagg attcttacca
     1081 tcctggccag gaacatcggc tcccgaactg tatgtgctca gacggacac
//
LOCUS       DASRPQ010000139         3298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_952952, whole genome shotgun sequence.
ACCESSION   DASRPQ010000139 DASRPQ010000000
VERSION     DASRPQ010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3298
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_952952"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="VFD73_01605"
     CDS             complement(<1..255)
                     /locus_tag="VFD73_01605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72728.1"
                     /translation="MSDDVLRIYLNDHLAGATAAIDLLQHLTKLRPESDAQQRYAQLR
                     WEIEEDKQVLQNILVGLGGTESPARKAAGWLSGKLGQVKMA"
     gene            complement(248..670)
                     /locus_tag="VFD73_01610"
     CDS             complement(248..670)
                     /locus_tag="VFD73_01610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72729.1"
                     /translation="MNRRRVGQVAAGAASAGCFAWALWASRSSAIPELRVYDGYLMVI
                     GATVLVGVMAPLAWRWPRERSLVAIAIAATAGCIVPLAMSALRHHIPLVARLRGAWIL
                     GGADLVGPALIIGFVGLWFALREHGAERRRTAGGAIHE"
     gene            complement(667..1236)
                     /gene="pyrE"
                     /locus_tag="VFD73_01615"
     CDS             complement(667..1236)
                     /gene="pyrE"
                     /locus_tag="VFD73_01615"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR00336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HZI72730.1"
                     /translation="MTDQEALRRLLLQRSVQQGDFILASGRRSSFYIDCRLTTMSAEG
                     MVIIGRMGLAAIEGAGWAPQAVGGLTLGADPVAYAIAAASFLNRTAATSLVDAFTVRK
                     EAKTHGTKRLIEGNLRDGDAVVVVEDVITSGASAARAASAIEDAGGNVLGVLAVVDRE
                     EGGRQMLESAGRKVVTLIGVSDLGLDQGQ"
     gene            complement(1233..2132)
                     /locus_tag="VFD73_01620"
     CDS             complement(1233..2132)
                     /locus_tag="VFD73_01620"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI72731.1"
                     /translation="MTADTLTGRTIAGYHLTRYVGEGGTATVYRAEHPERGVAAVKIL
                     RARLAQDPVAVKRFLREAEYGARIHHPNIVQTYDYGQADGLHYLALEWAEGEPLAKFV
                     NRSGNLAPSLVAKIVEQIGAALTAAHRAGIIHRDLKPANIMYDPAQQTAKLLDFGIAR
                     DAEMSPEERLTRAGFFVGTLQYVAPETLSGELVNEQADVYSLATITYYLLTGALPFLG
                     KSPRELFQQLLTQPPVKLNEARRGLRFPPAVESTVMQGLERDLSKRCRTVEEFARAFC
                     AAVQDEPSKRPGFFAGLFRKGGE"
     gene            2275..>3298
                     /locus_tag="VFD73_01625"
     CDS             2275..>3298
                     /locus_tag="VFD73_01625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72732.1"
                     /translation="MRRHLVLLFLCLGAADCGSWRRVGTKDAPTPADQLTRVVNPNAF
                     YQRLGRLAAGDPLPFIGTVAFAAGPQDSVISVLGLSLENRALSFQRDGNVFVARYRVG
                     VSFQKEGARPVELTREEIVRVPTFKETLRAEESVLFQQILRLTPGSYNVSVTVRDAGS
                     TSESRAQGRYTAPSFHPGSTSAPILAYQATGRGARTDPLSVVLNPRGAVGYGADTLLA
                     YIEGYDFPAAATIPFEVRDEQGDVIYTDSLRFRGGRPVESQVIRLAPDSISLGELELV
                     VGNKPEQRSTSALVSFSQAWIVTNYDEMLDLLRYFGEDARVNAMRKASPAERSRLWRE
                     FYADTDP"
BASE COUNT          578 a         1087 c          991 g          642 t
ORIGIN      
        1 ggccattttg acctggccca gcttgcccga gagccatcca gctgccttcc tcgccgggct
       61 ctcagtgccc cccaacccta cgaggatgtt ctgtagtacc tgtttgtctt cttcgatctc
      121 ccagcggagc tgggcgtatc gctgctgtgc atcgctctca ggacggagtt tggtcagatg
      181 ctgcagcagg tcgatggcag cggttgcccc ggcgaggtga tcgttgagat agatccgcag
      241 aacatcgtca ctcatgaatc gcgccccctg ctgttcggcg tcgctcggct ccgtgctccc
      301 gtagcgcgaa ccaaagacct acgaagccga tgatcagcgc cggccccacc aggtcggctc
      361 cgcccagaat ccaggcgcct cgaagccgcg cgacgagcgg gatatggtgt cgcagtgctg
      421 acattgccag cggaacgatg cagccggcag tggctgctat cgctatggct acgagagacc
      481 gctcccgggg ccagcgccag gcgagtggcg ccatgactcc aaccagtacg gtggcgccaa
      541 tgaccatcag ataaccatca tagactcgaa gctctggtat ggcggacgac cgcgaggccc
      601 agagtgccca ggcaaagcac ccggccgatg ccgctcccgc tgcgacctgt cccactctcc
      661 gtcgattcac tgcccttggt ccagccccag atcactgacg ccgatcaggg taacgacctt
      721 tctccccgct gactccagca tctgtcgccc accttcttcc cgatcgacca ccgccagcac
      781 gccgagaacg ttgccgcccg catcttcgat cgccgaggcg gcgcgtgccg ctgaggcgcc
      841 ggatgtgatc acgtcttcga ccacaaccac tgcatctcca tcccggaggt tcccctcgat
      901 gagtcgcttg gtcccgtggg tctttgcctc cttccgcacg gtaaaagcat ccaccagaga
      961 cgtggccgcc gtgcgattca aaaaactcgc cgcggcaatg gcataggcta ccgggtcggc
     1021 tcccagggtg aggcctccga cagcctgggg cgcccaacct gctccctcga tagcggcgag
     1081 acccatccgg ccgataatca ccatgccctc ggctgacatc gtggtgagtc gacagtcgat
     1141 gtagaaggag gagcgccggc ccgacgccag aatgaaatct ccctgctgga cggagcgctg
     1201 caacaggagg cgccgaagcg cctcctggtc agtcactcgc cccccttccg gaagagccct
     1261 gcgaagaaac ccggtcgctt gctcggctcg tcctgcacgg cggcgcagaa cgcgcgggca
     1321 aactcttcca ccgtccggca gcgcttgctg agatcgcgct ctagtccctg catgaccgtg
     1381 gattcgactg ctggtggaaa ccggagcccg cggcgggctt cgttcagctt gactggaggc
     1441 tgggtgagga gctgttggaa cagttcccgt ggactcttcc ccaggaacgg gagtgcccca
     1501 gtgaggagat aataggtgat ggtggccaga ctgtagacat ccgcttgttc attgaccagc
     1561 tcaccgctca acgtctcagg cgcgacgtat tgtagcgtac ccacgaagaa cccggcccgg
     1621 gtgagccgtt cctccggact catctcggcg tcgcgtgcga tgccgaagtc gagcagcttt
     1681 gccgtctgct gcgccgggtc atacataatg tttgcgggct tgagatcgcg gtgaatgatg
     1741 ccggcccggt gtgcggcagt cagcgcggct ccgatctgct cgacaatttt cgcaaccagc
     1801 gatggtgcca gattgccgga acgattcacg aacttggcga gcggttcgcc ctcggcccac
     1861 tccagcgcaa ggtagtgcag tccatcggct tggccgtagt cataggtctg gacgatgttg
     1921 ggatgatgga tccgggcgcc gtattcggct tcacgcaaaa agcgcttgac cgctaccgga
     1981 tcctgggcca ggcgcgcgcg cagaatcttc acggcggcca cgcctcgctc cggatgctcg
     2041 gcccggtaca ccgtggccgt gcctccctcg ccgacgtagc gagtcaggtg atatccggcg
     2101 atcgtcctgc cggtaagggt atctgcggtc attgagacgc caagctacct tatctctcgc
     2161 ggggcagcaa gttagcgctc gtccgcgaaa tgagacgtgc ttgacgcctc tcctgcggcg
     2221 tcactaacgt tcgcaatcac ccaacattgc cgctccgctc attcagggca ggtcatgcgt
     2281 cgacacctcg ttcttttgtt tctctgcctc ggggctgccg actgcggcag ttggaggcga
     2341 gtgggcacga aggacgcccc gacgccggcc gaccagctca ccagggtagt caacccgaat
     2401 gcgttctatc aacggctggg gcgtctagcc gccggagatc ctctcccatt catcggcacc
     2461 gtcgccttcg ctgcgggccc gcaggactcg gtgatcagcg ttctcggcct ctcgctggag
     2521 aaccgcgccc tctcctttca gcgtgatgga aacgtgttcg tcgcgcgata ccgcgtcgga
     2581 gtttcttttc agaaggaagg tgctcgcccg gtcgaattga cccgtgagga gatcgtccgc
     2641 gtccccacct tcaaggagac gctccgggcc gaggaaagcg tgctgtttca gcagatcctc
     2701 cgcctcacgc cgggttccta caacgtgtcg gtcaccgttc gcgacgcggg ctctacgtcg
     2761 gaaagccggg cccagggccg ctacaccgcc ccttcttttc atccggggag tacgtccgcc
     2821 ccaatcctgg cctatcaggc cacgggtcgc ggcgctcgga ctgaccctct ctccgtggtg
     2881 ctcaacccga ggggggccgt gggctatgga gccgacactc tgctggcata catcgagggc
     2941 tatgatttcc ccgccgcggc aaccattccc tttgaagtgc gtgatgaaca gggcgatgtg
     3001 atctacaccg attcgctgcg attccgcggt gggcggccgg tagaaagcca ggtaatccga
     3061 ctcgctccgg acagcatttc cctcggcgag ctcgagctgg tggtgggaaa taagccggaa
     3121 cagcggtcca cttcggctct ggtttccttt tctcaagcct ggatcgttac gaactacgat
     3181 gagatgctcg acctgttgcg ctactttggt gaggatgccc gggtgaacgc aatgaggaaa
     3241 gcctcacccg ccgagcggtc tcgtttgtgg cgcgagttct acgccgacac cgatccca
//
LOCUS       DASRPQ010000140         1012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2206878, whole genome shotgun sequence.
ACCESSION   DASRPQ010000140 DASRPQ010000000
VERSION     DASRPQ010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2206878"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..857)
                     /locus_tag="VFD73_01630"
     CDS             complement(<1..857)
                     /locus_tag="VFD73_01630"
                     /inference="COORDINATES: protein motif:HMM:NF019262.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome domain-containing protein"
                     /protein_id="HZI72733.1"
                     /translation="MVSLLLLWGTPLRAEPPGQKPAEPAEVSYYRHVLPVFQQHCQGC
                     HQPAKPQGGFVMTSHADLLKAGDSKDSGVVPGQPEKSAVFRLITPQDGKPPTMPRGKA
                     PLIEREVALIKKWIAQGAKDDTPSSTREVVDVDHPPRYTLPPVITALGYSPDGSLLAV
                     SGYHEVLLHKADGSGLVARLVGSSERIQSLAFSPNGKLLAVTGGNPGRFGEVQIWDVG
                     RQELRLSVAVTYDTVYGVSWSPDGSKIAFGCSDNTLRAIDAKTGKQVLYQGAHNDWVL
                     GTVFSADAS"
BASE COUNT          180 a          309 c          353 g          170 t
ORIGIN      
        1 tggctcgcat cagcggaaaa gaccgtcccc aggacccagt cattgtgcgc accctggtag
       61 aggacttgct tgcccgtctt cgcgtcaatg gcgcgcaggg tgttgtccga acagccgaac
      121 gcgatcttcg atccatcggg cgaccagctg accccgtaca ctgtgtcgta ggtaacggcc
      181 acggagagcc ggagttcttg cctgcccacg tcccagattt gcacttcgcc gaagcggccg
      241 ggattgccgc ccgtgacggc gagcagcttg ccgttggggg agaaggccaa cgattgaata
      301 cgttccgagc tgccgaccag ccgggcgacg agtccggagc catcggcctt gtgcaacaag
      361 acttcgtggt agccggagac ggccagcagg ctgccgtcgg gggaatagcc cagcgcggta
      421 atgacggggg gcagggtgta cctgggcggg tggtccacgt ccaccacctc ccgggtggag
      481 gatggcgtgt cgtccttggc cccctgggca atccacttct tgatgagcgc gacctcgcgc
      541 tcgatcaggg gggccttacc cctgggcatg gtggggggct taccgtcctg aggggtgatc
      601 aggcggaaga cggcgctttt ctccggctgt cccgggacga caccggagtc cttgctgtcg
      661 cccgccttca gcaggtcggc gtggctggtc atgacgaagc cgccttgggg cttggcaggc
      721 tggtggcagc cctggcagtg ctgctggaag accggcagga cgtggcggta gtagctgacc
      781 tcggccggct ccgcgggctt ctggccgggc ggctcggccc gcaggggggt tccccagagc
      841 agcaaaaggg agaccacgag aacgagcctt cgaacggccg acatcaccac ttacctctcc
      901 aaaaggggcc gggaaaaaca ccggacggtt accgccaggg taacagcaaa ctccgttcag
      961 tcaaaaggat tctggtgtgg ggcaacgaac caggctctga cagcgggggc cg
//
LOCUS       DASRPQ010000141         1549 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1580284, whole genome shotgun sequence.
ACCESSION   DASRPQ010000141 DASRPQ010000000
VERSION     DASRPQ010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1549
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1580284"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..286
                     /locus_tag="VFD73_01635"
     CDS             <1..286
                     /locus_tag="VFD73_01635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72734.1"
                     /translation="EYLSGKSVFLLQSPDGVTWVMQCYGNHIDSGLSQATLPGLGQRL
                     NLPAGWDFKAKTLDRNLILDTKGVARIIPDDLENIYQRCTKDVRNFDPWE"
     gene            903..1322
                     /locus_tag="VFD73_01640"
     CDS             903..1322
                     /locus_tag="VFD73_01640"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZI72735.1"
                     /translation="MVFRQRKGRSKLTLQCPPPVLELLREHRKRQAAERLRAGDAWKD
                     HDLVFTTRHGGSIERTEDWRAWKAILRQAGVRDARVHDARHTAATLLIEQGVHIRVVQ
                     EVLGHTRVTTTERYTHMATLQMRDASERMGEALWGQG"
     gene            complement(1410..1498)
                     /locus_tag="VFD73_01645"
     tRNA            complement(1410..1498)
                     /locus_tag="VFD73_01645"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1460..1462),aa:Ser,seq:gct)
BASE COUNT          298 a          491 c          524 g          236 t
ORIGIN      
        1 cgagtacctg agcggaaagt ctgtcttcct gctgcagtcc ccggacgggg tgacctgggt
       61 catgcagtgt tatggcaacc acatcgattc cggcctgagc caggccaccc tgcccggcct
      121 ggggcagcgg ctgaacctac ccgcagggtg ggacttcaag gcaaagaccc tcgaccggaa
      181 cctcatactc gacaccaagg gcgtggcccg catcatcccc gatgacctcg aaaacatata
      241 tcaacgctgc accaaggacg tccgcaactt cgacccgtgg gagtgacctg aggccccgca
      301 caacgcgtcg tcaccggctg gcacggacac cccgacaccc ttggcatcca cgctgttgac
      361 gcggtgacgg cgactgggag catcggacac gaggcaagtc ggctgcatgc tgaaccgccc
      421 ggacatgaca atatgccggt cagatccgtg ctgccgcccg gctggtccgg cgcgggcgcg
      481 ccgggcgggg cctcccaagg ccagagcccg gcgcgaggag cgccggacgc ggcgccgcgc
      541 agcggcgcct tgatgtcgcc gctagcaaga gaaacggcgc tcgatggtcg gtcgctcttg
      601 ctcttggcat acggcaggga gaagcccttg gtctccgctg atcgtatgtg gacctggaaa
      661 ctggcgtgat ccgagcatgg tttcaggttc agcgtctcgc gtggcggcat ggctgcgatg
      721 atccgcatgc gtgcggcgga caatggcgcc gtctcgcctg caagaagggc tgcaagcagc
      781 accggcaccg ccggacttgt gaaccgggtt gcacgagaaa gggacacgtt tgctacaagc
      841 gtccctgccg ggcggattgc attgctcacg ccgacaaatg ccccaagcgg agcggcgggg
      901 gcgtggtctt ccggcaacgc aagggcagga gcaaactcac cctccagtgc ccgcccccag
      961 tgctggagct gctcagggag caccgcaaga ggcaggcggc cgagcggctg agggcaggag
     1021 atgcctggaa ggatcacgat ctggtcttca ccacgcggca tggcggttcg atcgaacgta
     1081 ccgaggactg gcgggcctgg aaggcaatcc ttaggcaggc cggggtgcgg gatgcccgag
     1141 tccatgacgc ccggcatacc gccgcgacgc tgctgatcga gcagggcgtg catatccgcg
     1201 tcgtccagga ggtgcttggc cacacgaggg tcacgacgac ggagcgctac acccatatgg
     1261 ccacgctcca gatgagagac gcgagcgagc ggatgggtga ggcgctatgg ggccagggat
     1321 gagctcaact gcaacccgaa ttgcaacctt tggcttcctc gtaaggcatg ccccatcccc
     1381 gcatgttccg ggagagggct tgagagctgc ggaggatcgg ggatttgaac cccggagggt
     1441 ggttacaccc aaccgcatta gcagtgcggc gccatagacc ggactaggcg aatcctccag
     1501 ccgcacacgt ggtgcggtgg gccatagcgt accggcacta gcccggccc
//
LOCUS       DASRPQ010000142         1365 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3155166, whole genome shotgun sequence.
ACCESSION   DASRPQ010000142 DASRPQ010000000
VERSION     DASRPQ010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1365
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3155166"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..430
                     /gene="eno"
                     /locus_tag="VFD73_01650"
     CDS             <1..430
                     /gene="eno"
                     /locus_tag="VFD73_01650"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016387099.1"
                     /note="catalyzes the formation of phosphoenolpyruvate from
                     2-phospho-D-glycerate in glycolysis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HZI72736.1"
                     /translation="IEDGLAENDWAGWGLLTERLRDRVQLVGDDLFVTNVDRLGRGIE
                     EGVANAVLVKVNQIGTLTETLQCIELAKGSGYGVIISHRSGETEDTFIADLAVATGAG
                     QIKTGSASRTDRTAKYNQLLRISEELGDLAHYPGRDLYQL"
     gene            427..762
                     /locus_tag="VFD73_01655"
     CDS             427..762
                     /locus_tag="VFD73_01655"
                     /inference="COORDINATES: protein motif:HMM:NF016839.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HZI72737.1"
                     /translation="MTLARWAMVVGLLSALYFALQGGEYSTLDLLQLRREEAAERGTV
                     ERLTRVVDSLEHAAVAIERDPRTQERVARERFGMLRKGEFLYRLVPTDNSVSGERELQ
                     QREQEEQER"
     gene            884..957
                     /locus_tag="VFD73_01660"
     tRNA            884..957
                     /locus_tag="VFD73_01660"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:918..920,aa:Met,seq:cat)
     gene            1141..>1365
                     /locus_tag="VFD73_01665"
     CDS             1141..>1365
                     /locus_tag="VFD73_01665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72738.1"
                     /translation="MATIATSLAASENIQAIQLLLEVGAIRTNVVRVTPEMIAPGTLD
                     LIIDQPLVDYLPTSFGRALADYVATDMGAFE"
BASE COUNT          254 a          392 c          456 g          263 t
ORIGIN      
        1 gatcgaagat ggtcttgccg agaacgactg ggctgggtgg ggcctgctga ccgagcggct
       61 gcgcgatcgg gttcagctgg tgggagatga cctgttcgtt accaacgtcg atcgtctggg
      121 gcggggaatc gaagagggcg tggcgaacgc cgtgctggtg aaggtcaacc agatcggcac
      181 tctcaccgaa actttgcagt gcatcgagct ggccaagggg agtggctatg gcgtgatcat
      241 ctcgcataga tcgggcgaga cggaggacac cttcatcgcc gacctcgcgg ttgcgactgg
      301 ggcagggcag atcaagaccg gcagcgccag ccgcaccgat cgcaccgcga agtacaacca
      361 gctgctccgg atttccgagg agctgggaga cctggcgcac tatcccggcc gggacctcta
      421 ccagctgtga ccctggcccg ctgggcgatg gtggttgggt tgttgtcggc tttgtatttc
      481 gcgttgcagg gaggagagta cagcacgctg gatctgctgc agcttcggcg ggaagaagcg
      541 gcggagcggg ggacggtgga gcggctgacc cgggtggtgg actcgctcga gcacgcagcc
      601 gtcgcaatcg aacgggatcc ccgcacccag gagcgggtgg cccgggagcg atttgggatg
      661 ctgcgaaaag gggaattcct ctaccgctta gtcccgacgg acaacagcgt gagtggtgaa
      721 cgggaactgc aacagcgtga gcaggaagag caagagcggt gagcgataag cggtacgtga
      781 agggtctggg gcaggttatt ttggtgtggg acgacggtgg gagtatggcc gcggttgagc
      841 agggccgctc actgcttacc gctcaccgct tacggttgga tacggcaggg tagctcagct
      901 ggttagagca cggcactcat aatgccgggg tcgcgggttc gagtcccgcc cctgctatca
      961 cccgaagcct cgcgctccca ctgagttgcg gggctttctt catgcgattc ctcagactcc
     1021 cgcgtttcct tggcacctcc agcggcaccc cgagagcccc atttctctgc atctcgagcc
     1081 gcggcgatct tctcccagcg gtcccgctcc tcagtgtcgg gcttgaatcg accgtacacc
     1141 ttggcgacca tcgcaacgtc cctggccgca agcgagaaca ttcaggccat tcaactcctc
     1201 cttgaggttg gtgcaattcg cacgaacgta gttcgagtta cgccagagat gattgccccc
     1261 ggcaccttgg acctgatcat tgaccaacca ctggtcgatt acctcccgac ctctttcggc
     1321 cgagcgctcg cagattatgt cgcaactgac atgggggcct ttgaa
//
LOCUS       DASRPQ010000143         1190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_953170, whole genome shotgun sequence.
ACCESSION   DASRPQ010000143 DASRPQ010000000
VERSION     DASRPQ010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_953170"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            447..>1190
                     /locus_tag="VFD73_01670"
     CDS             447..>1190
                     /locus_tag="VFD73_01670"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI72739.1"
                     /translation="MIELLERQRRLTVNQWKLICTANLADLLDFFDLFLIGYVTAALT
                     KEWSLTYWQGGVILMASGIGAPPGAFVWGWLGDRIGRRTVFIWSAITISFATGIMVFT
                     PGPHALIPGWLYLAFFRVFVGVGNAGIYAIDLPLVQEFIPGYKRGWVSALVTTMLPAG
                     GILAGFISWQLLPVVGWRGLFLVGLVPLVLVFMIRYWVPESPRWLIRMGRLEEARKSL
                     AWALMIDPGKITLPAHVEAGDQTRWLELFK"
BASE COUNT          189 a          341 c          410 g          250 t
ORIGIN      
        1 tggcgatggc ggcataagac gaggcggggc cgctgtgggg attggtgttg ccaatcttga
       61 tctcggtggc cgtgacgccg ggttgggcca gcgccggagc gccggtcgtc gctaggccga
      121 atgccagtag ggccgcgggc aacaaggctc gtctcagcat gatgtcctcc tcgaggatga
      181 gtgtggatgg agacgtgggt atcgagtgta gaggtaaata gattttcagg ttgacacgtt
      241 tccgcgaggg tcctacagtt ccgccgcgca gatacaccgc gtgcagttcc ggcccgggcc
      301 ccaccgaggt tgggatggga gacggcgcat gacgagtcgc cccgttcagg agattacctg
      361 acggggcgtt cgtgttttct gatcccttgc agcgtgacgc cgggccgaat cggacgctcg
      421 ggagcccacg cagagagggg accgtcatga tcgagttgct ggagcgccaa aggcgcctga
      481 ccgtgaatca gtggaagctg atctgcacgg ccaacttggc tgacctgctc gatttcttcg
      541 atctgtttct gatcggctac gtcaccgcag cgctgaccaa ggaatggtcg ctgacctact
      601 ggcagggcgg cgtgatcttg atggcttctg gcatcggcgc tccacccggc gcctttgtct
      661 ggggctggct cggcgatcgc atcggccggc gcaccgtctt catatggtcg gcgataacga
      721 tctcgttcgc caccggcatc atggtgttca cgccaggacc gcatgcgctg atccctggat
      781 ggctgtacct ggcgttcttc cgggtatttg tcggcgtcgg caacgccggc atctacgcca
      841 tcgacctgcc attggtgcag gagttcatcc cgggctacaa gcgcggctgg gtcagcgcgc
      901 tggtcacgac gatgctgccc gccggcggca tactggcagg gttcatttcg tggcaactgc
      961 taccggtagt cggctggcga gggctgttcc tggtcggtct tgtgccactg gtgctcgtgt
     1021 tcatgatccg ctattgggtg ccggaatcgc cccgctggct gatccggatg gggcgtctcg
     1081 aagaggcccg caagtcgctg gcttgggcgc tgatgatcga tccgggaaag atcaccttgc
     1141 ccgcccacgt ggaggcgggg gaccaaaccc gctggctaga gctgttcaag
//
LOCUS       DASRPQ010000144         3474 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_326659, whole genome shotgun sequence.
ACCESSION   DASRPQ010000144 DASRPQ010000000
VERSION     DASRPQ010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3474
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_326659"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..549
                     /gene="mug"
                     /locus_tag="VFD73_01675"
     CDS             <1..549
                     /gene="mug"
                     /locus_tag="VFD73_01675"
                     /EC_number="3.2.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000700 - mismatch base pair DNA
                     N-glycosylase activity [Evidence IEA];
                     GO_process: GO:0006285 - base-excision repair, AP site
                     formation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="G/U mismatch-specific DNA glycosylase"
                     /protein_id="HZI72740.1"
                     /translation="IRRPSRSEVAASVGRRVPDLIEPNLDVLFCGINPGLYSGATGHH
                     FARPGNRFWPALHRSGFTPTLLSPWQERSLLDLGIGITNLVARATAAASDLTEAELRA
                     GRRRLEGKVRRYTPRWVAVVGIGAYRTAFDRPRAVIGPQPERLHRSRLWVLPNPSGLN
                     ANHQIAELTQAFETLRCAIMER"
     gene            546..1007
                     /locus_tag="VFD73_01680"
     CDS             546..1007
                     /locus_tag="VFD73_01680"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI72741.1"
                     /translation="MKTGVDAVAIRRATPEDATRLAQLSAVLGYPVKPEILRDRLDRL
                     IESSRDVVLLAELPEAGTLGWIHGAEQDLLESDRRCEILGLVVDPEHRGKGIGRRLVE
                     AVERWAEQRGLKQMAVRSNVTRLESHPFYERLGYARAKTQHAYRKRLSPTA"
     gene            complement(997..1608)
                     /locus_tag="VFD73_01685"
     CDS             complement(997..1608)
                     /locus_tag="VFD73_01685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72742.1"
                     /translation="MQHALALCGSLLLSACASKYSQVPARLNLAPYGRVAIVTFGADQ
                     PNSAISSLATQRFAEALLANQTGIELLELGSADSTLKALASSSDGVALAKTLGKERNV
                     PAVFVGYLKVSNVKPRGHIDASGMNVRAGVSAELTVRLLSTSTGGTVWRSSSVANGTL
                     GGLNISDRLPSIGVRDKNEAYGEMVSQLISEVTRDLRPTWIKQ"
     gene            1862..2269
                     /locus_tag="VFD73_01690"
     CDS             1862..2269
                     /locus_tag="VFD73_01690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72743.1"
                     /translation="MLRSAVLRRTLWLESAGFLLIVAIIWMDEILDLPHLLFGATPTP
                     LRLGEAWLESILTATVGAVIVSVTYRAFRRIEYLESLVVICAWCRRVRADREWLSMEE
                     FLERQHNAQTTHGICEGCAAGIATPPYSMASTS"
     gene            complement(2282..>3474)
                     /locus_tag="VFD73_01695"
     CDS             complement(2282..>3474)
                     /locus_tag="VFD73_01695"
                     /inference="COORDINATES: protein motif:HMM:NF020660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-amylase/4-alpha-glucanotransferase
                     domain-containing protein"
                     /protein_id="HZI72744.1"
                     /translation="IAYLPTASYREMESWALPPDAALRLLRLERDLGESRVAGPDGAL
                     LRGAHWRNFLVKYSESNRMHKKMQALSQLCRERGDPPAARRAIGRAQCNDAYWHGVFG
                     GLYLPHLREAIWRNLAQAERELRSDESIAAEVFDLDGDGHEEVWIHSSRFSAIVSPSR
                     GGCLTEYTVFATQTNYANTLTRRREAYHDTALEHRGSSSDGGDGGTRSIHDIEDGLRL
                     DQRPPIDADDRALFVDRVLPRSLAFEQYVSGDYWPVRSWARTPYEFTLDRSADSVEIV
                     CSAPGPAGGPAAVVKRYRFGVDGDFSVAYRWDPTLADAEDFFGTEISLFAALELQSQP
                     EAEVWSFPIETVAKSERGFDRTVQGESVTLRWKVSLGAAQVDVRSLASSVAHAEPATV
                     ESAE"
BASE COUNT          649 a         1084 c         1093 g          648 t
ORIGIN      
        1 atccggcgac ccagccgatc ggaggtggca gcgtcggttg gccgcagggt gccggacctg
       61 atcgagccca acctcgacgt tctgttttgc ggaattaatc cagggctcta ctccggcgcg
      121 acgggccatc acttcgctcg cccgggaaac cgtttttggc ctgcgctcca tcgttccggg
      181 ttcaccccca cacttctcag tccctggcaa gaacggtcgc tgctggacct tggcattgga
      241 atcaccaacc ttgttgctcg cgccaccgct gcagcaagcg acctgaccga ggccgagctg
      301 cgagcgggcc gccgacgctt ggagggcaaa gtgcggcgct atactcccag gtgggtagcg
      361 gttgtgggca tcggtgcgta ccggacggcg tttgatcgcc ctcgagccgt cattggtccc
      421 caaccagagc gactgcaccg aagccgtctc tgggtgcttc ccaacccgag tggcctgaat
      481 gccaatcacc agatcgcgga gctgacgcag gcattcgaga cgcttcgctg cgccatcatg
      541 gaacggtgaa gaccggcgtc gacgctgtgg cgatcaggcg cgccacgccg gaggacgcca
      601 ctcgcctggc gcagctgtcg gctgtgctcg ggtaccccgt gaaaccggaa attctgcggg
      661 atcgcctaga ccggctgatc gaaagttcga gagacgtcgt gttgctcgcg gagctaccgg
      721 aagcaggcac gctcggctgg attcacggcg ccgaacagga tctcctggaa tccgaccgac
      781 gctgtgaaat tctgggccta gttgtcgacc cggagcatcg ggggaaaggt attggacgtc
      841 ggctggtgga agcagtcgag cggtgggctg aacagcgtgg actgaaacag atggccgtgc
      901 gaagtaacgt cacccgcctg gaatcacatc cattctacga gcggctgggt tatgcccggg
      961 ccaagaccca gcatgcgtat cggaagcgtc tgtcgcctac tgcttgatcc aggtaggccg
     1021 cagatcccga gtcacttccg agatcagctg actgaccatc tctccatagg cttcgttctt
     1081 gtctcgcact ccgatcgagg gcagccggtc ggagatattc aagcctccca gtgtcccgtt
     1141 cgccaccgag ctggagcgcc acaccgtccc tccggtgctg gtcgagagca gtctcacagt
     1201 cagttcggcg gagacgccgg cccgcacgtt catgccggag gcgtcgatgt gcccgcgggg
     1261 tttgacattg gagaccttga gatagcctac gaacaccgcc ggaacattgc gttccttgcc
     1321 caatgtcttg gccagcgcca ctccatcgct gctgctggcg agtgccttca gcgttgaatc
     1381 ggcagaaccc agctccagca gttcgattcc cgtctgattg gccagcaggg cttcggcgaa
     1441 gcgctgggtc gccagcgagc tgatcgcgct attcggctgg tcggcgccga acgtgacgat
     1501 cgcgactcgc ccatagggcg ccagattcag tcgcgccgga acctggctgt atttggaggc
     1561 acaggccgac agcaggagcg acccgcaaag cgcgagcgca tgttgcaatc ggacaggctg
     1621 aactgcgctg ttcctgagca ttttagtccg tgtctgctgg ggatgtccgc ggaaggggca
     1681 agagccgcgc caatggccgg gcatgcccag cgagaccggc tcggacaacc ctgaagtctc
     1741 gccgcgcatt ccatgagagt tcggtctatt gttctcggta gacgccgatc ccatagtgta
     1801 tgcggaagat tctaggcatc cggcgggtgc tcgaccttca tgatccgagg gcagacttgt
     1861 gatgctgcgt agtgccgtgc ttcgccgcac cttgtggctg gaaagcgctg gcttcctgct
     1921 gatcgttgca atcatctgga tggatgaaat cctggaccta ccccacctcc tctttggggc
     1981 cacgccaacc ccgctccggt tgggcgaagc ttggctggaa tcgatcctga ccgccaccgt
     2041 cggtgccgtg atcgtgtcgg ttacctatcg ggcgtttcgg cggatcgaat acctggagtc
     2101 gttggtggtg atctgcgcgt ggtgtcgacg ggtgcgggct gatcgagaat ggctgagtat
     2161 ggaggaattc ctggaacgcc aacacaacgc gcagaccaca cacgggattt gcgaaggctg
     2221 cgccgcgggt atagccacac ctccttacag catggcgtcc accagctagc agaacatcgg
     2281 tctattcagc cgactcaaca gtggccggct cggcatgagc aacgctactg gccagggagc
     2341 gaacgtcgac ctgagccgcg cccagactga ctttccaccg caaggtcacc gattcgccct
     2401 ggacggtgcg atcgaagccc cgctccgact ttgctaccgt ttcgatgggg aagctccaga
     2461 cctcagcctc aggttgagac tgcagctcga gtgcagcgaa gagggagatc tcggttccga
     2521 agaaatcctc agcatccgca agagttgggt cccagcgata ggccacggaa aagtcgccgt
     2581 ccacgccgaa gcggtaccgc tttaccacgg cggcaggacc tccggcggga ccgggagcgc
     2641 tgcagacgat ctccacacta tccgcggaac gatcgagggt gaattcatag ggggttcgag
     2701 cccaggatcg caccggccag taatccccgc tgacgtactg ctcaaaagcc agactcctcg
     2761 gcagcacccg gtccacgaat aaggcccggt cgtcggcgtc gatcggcggt cgctgatcca
     2821 gccgcagtcc gtcctcgata tcgtgaatgc tgcgcgttcc cccatcgcct ccgtcggaag
     2881 agctcccccg atgctccagc gcggtgtcgt ggtaggcttc acgacgacgg gtgagagtgt
     2941 tcgcgtaatt ggtctgggtg gcaaagacgg tgtattcggt gaggcagcca ccacgcgagg
     3001 ggcttacgat ggccgaaaac cggctggagt ggatccagac ctcctcgtgg ccatcaccgt
     3061 ccagatcgaa gacctcggct gcaatgcttt cgtcgctgcg caattcgcgc tcggcttgcg
     3121 ccaggttgcg ccagatcgcc tcacgcagat ggggcaggta gagcccgccg aagacgccat
     3181 gccaataggc gtcgttgcat tgagcccggc cgatggcccg gcgagccgca ggtggatccc
     3241 cccgctcacg gcaaagctgg gagagcgcct gcatcttctt gtgcattcgg ttggactcgg
     3301 agtacttcac caaaaaattg cgccagtggg ctccccgaag aagcgcaccg tccggtcccg
     3361 ccacccggga ttcaccgaga tcgcgctcga gcctcagcag gcggagagcg gcatcgggcg
     3421 gcaacgccca actctccatc tcccggtatg aggcggtggg cagataggca atcc
//
LOCUS       DASRPQ010000145         1160 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_953608, whole genome shotgun sequence.
ACCESSION   DASRPQ010000145 DASRPQ010000000
VERSION     DASRPQ010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_953608"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            262..570
                     /locus_tag="VFD73_01700"
     CDS             262..570
                     /locus_tag="VFD73_01700"
                     /inference="COORDINATES: protein motif:HMM:NF014279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIB/MDM2 domain-containing protein"
                     /protein_id="HZI72745.1"
                     /translation="MPTEASTTPKKADTAKDAPAKKVNPALLKPLQPSKELAAVVGAD
                     PLPRPEVVSKVWDYIKKHKLQDPQNKREIMADEKLQAVFGKNRVTMFEMNKHLAQHLK
                     "
     gene            complement(618..>1160)
                     /locus_tag="VFD73_01705"
     CDS             complement(618..>1160)
                     /locus_tag="VFD73_01705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72746.1"
                     /translation="IRAPEPIPDRRAAEAVTPKAPAEAGPVQRLTGRILPDLFGETRA
                     EERLRQDLDERATRLRTARGARKTRPSVEPMGANTPLVDEPDTAHKAALEPTPAAEPL
                     SLEAPVLAVEDVVAPAAVQPVLSLSVSSLDQPPGRTGRLRECRTKPDQAVGRRAERQE
                     AATRLRAGERWKRRLPQVCW"
BASE COUNT          206 a          385 c          377 g          192 t
ORIGIN      
        1 ttagccccgg ataggtcagg cgaggggagc gacacgggca tcacggttca gagtcgccgc
       61 ccgcgcaata gccgcgcaac caaacgggcg tttccggttg cgatcgcgac cgtatgggtg
      121 ttgtcacctg catggtggct aggagcccgc gtcctatcag gttagcggtc tcggtcgtgg
      181 cgcggcttgg accatgcgtt tgggccggtg tccgtcctcc tgaccacacc gacagccgtc
      241 tgaacagaac ggagaacgac catgccgacc gaagccagca cgaccccgaa gaaggccgat
      301 accgccaagg atgcacctgc caagaaggtg aacccggctc tgctaaagcc cttgcagccc
      361 tccaaggagc ttgcggccgt ggtgggagca gacccgctgc cccggcccga ggtggtcagc
      421 aaggtttggg actacatcaa gaagcacaag ctccaggacc cgcagaacaa gcgcgagatc
      481 atggcggacg agaagctcca ggccgtgttc ggcaagaacc gcgtcaccat gttcgagatg
      541 aacaagcacc tcgcccagca cctgaagtaa ggcgccgagc cgcaggtaat ttagagcgcg
      601 acgcctttgg cctgtcccta ccagcagacc tggggcaagc ggcgcttcca tctctcaccc
      661 gctcgcaggc gcgttgccgc ttcctggcgc tcggccctgc gaccgacagc ttggtcgggc
      721 ttggtccggc attctcgcaa ccgaccggtt cgtcctggtg gctgatccag agagctgacg
      781 ctcaacgata ggaccggctg cacggcggct ggcgcaacaa cgtcctccac agccaagacc
      841 ggcgcttcca ggctcaacgg ctcggctgcc ggggtcggct cgagggcagc cttgtgtgca
      901 gtatctggct catccaccag cggggtgttg gcccccatgg gttcgacgct gggccttgtc
      961 ttgcgcgccc ctcgcgcagt ccgcaggcga gtggctcgct catccaggtc ctggcggagc
     1021 cgctcctctg cgcgggtctc cccgaagagg tcgggcagga tgcggcccgt cagccgctgc
     1081 acaggacccg cttccgcggg cgccttgggt gtaaccgcct cagcagcacg tcgatccggt
     1141 atgggttcag gggctcggat
//
LOCUS       DASRPQ010000146         1490 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1899614, whole genome shotgun sequence.
ACCESSION   DASRPQ010000146 DASRPQ010000000
VERSION     DASRPQ010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1490
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1899614"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="VFD73_01710"
     CDS             <1..429
                     /locus_tag="VFD73_01710"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZI72747.1"
                     /translation="GGQLLHRETKTEASEATLPMPGICVTALRIRDKDQAAAKAAAGA
                     SWIQSGLVFTTRAGTPFEPRNLNRRFETRCAKAGARRITVHDMRHTCATLLAALDVHP
                     RVAMRILRHAQIDVTMNVYTEVSDAKTLHALKRLGRQLGS"
     gene            794..1414
                     /locus_tag="VFD73_01715"
     CDS             794..1414
                     /locus_tag="VFD73_01715"
                     /inference="COORDINATES: protein motif:HMM:NF024952.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2'-5' RNA ligase family protein"
                     /protein_id="HZI72748.1"
                     /translation="MKTYGREMQLECRSIGLAAGTAAADSVKVVSVASPHAQSALILE
                     VPEAEPAVQRLRERLDASALLGVPAHITVLAPFIPADAIDAAVLAQLDRLFAAVSRFR
                     FRLDHTGWFSVEVLWLGPQEPAPFRALTHSVHQAFPAFPPFGGRFDEVVPHLTIGYGH
                     PLSDLRAAEKAAQAHLPIEARASRVALMTQLSPGGRWVTTASFSFT"
BASE COUNT          258 a          492 c          467 g          273 t
ORIGIN      
        1 ggcggccagc tcctccaccg ggaaaccaag accgaggcct cggaggccac cttgccgatg
       61 cccggcatct gcgtgacggc cttgcggatc cgtgacaagg accaggccgc cgcgaaggct
      121 gcggcaggcg cctcctggat ccaaagcggg ctggtgttca ccacacgggc tggtacgcca
      181 ttcgagccgc ggaacctgaa ccgtcgtttc gagacacgct gcgctaaggc gggcgcccgc
      241 cgcatcaccg tgcacgacat gagacacacc tgcgccactc tcctggctgc gctcgacgtg
      301 catcctcggg tcgctatgcg gatcctgcgt catgcgcaga tcgacgtgac gatgaacgtc
      361 tacaccgagg tctccgatgc taagacgctc catgcgctca agcggctcgg gaggcagctt
      421 ggctcgtagg cgttgctgta ctttgctgct gtacggcata agaaaaggcc acgtcccatc
      481 gtgggaagtg gcctgtgacc tgggtcgggg tggccggatt tgaaccggcg gcctcttcgt
      541 cccgaactgc gcaaacgttc aaataacgga cctgattgtg gatttatgcg ctggtcagag
      601 cactgtgcac ggtcaagctg accgcatctg accgcatctg cccacacgtg cacgcggctg
      661 gccgctcccg tttcgctccc agaatcggac acagccaagg tgccgagcgg tatagcgggg
      721 catcgcagga ttcgagtctg cgctcacggc tccggagagc actgatcctg accttcgtga
      781 ccagggcaac cctatgaaaa cgtatggccg cgagatgcaa ctggagtgcc gctctatcgg
      841 gctcgcagcg ggcacggctg ctgcggacag cgttaaggtc gtttctgtgg cgagcccaca
      901 tgctcagagc gccctgatct tggaggttcc cgaggcggaa ccggccgtgc agcggctccg
      961 ggagcgcctt gacgcgagcg cgctgcttgg cgttcccgcg cacatcacag tgctcgcccc
     1021 tttcattcct gccgatgcga tcgatgcggc cgtgctggcc cagctcgacc gcctattcgc
     1081 agccgtcagc cgattccgct tccggctgga ccacacgggc tggttcagcg ttgaggtgct
     1141 ctggctgggc ccgcaggagc ctgctccgtt ccgggccctg acccatagcg ttcaccaggc
     1201 gttccctgcc ttccccccgt tcggaggccg gttcgatgag gtcgtgcccc atctgaccat
     1261 tggctatggg cacccgctga gcgacctgcg cgccgctgag aaggctgctc aagcgcacct
     1321 gccgattgaa gcacgcgcca gcagggtcgc ccttatgacc cagctgtctc cgggcggccg
     1381 gtgggtcacg actgctagct tctctttcac ttaatagcga ccggccacga cctgcaacgg
     1441 cttgagaggc cttgacgtcg gccatgacaa gaagaaagcg cggaaaagca
//
LOCUS       DASRPQ010000147         1897 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1581234, whole genome shotgun sequence.
ACCESSION   DASRPQ010000147 DASRPQ010000000
VERSION     DASRPQ010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1897
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1581234"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..575)
                     /locus_tag="VFD73_01720"
     CDS             complement(<1..575)
                     /locus_tag="VFD73_01720"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HZI72749.1"
                     /translation="MDPNVFQTANAGFAQAMYEEYLREPGAVAPEWRRLFESGVIGEG
                     NGVPEAGQRGGGAAGQVNTGLTEQRAVQAAPLPRSPAAEPIKGPAAKLVANMTESLSV
                     PTATTFRVLPVALLEDRRGALNSAIQVAGKSGKISFTHLIAYAIVQAAKQQPAMAQTF
                     AVIDGTPHRVQPDGIGLGLAVDVQRKDGSRGL"
     gene            857..1867
                     /locus_tag="VFD73_01725"
     CDS             857..1867
                     /locus_tag="VFD73_01725"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HZI72750.1"
                     /translation="MLRLCANRLTPGAVLFGILLSSCGGGGDGGTGTPPSTTVIAKAS
                     ANNGDAQTGTVGQALPTPLQVVVTDAGAASVGTTVTWATRSGGTVNPTSAVTDANGAA
                     TTTWTLGTTSGSQAATATLSGASGSPVTFSATANPDAATGLSLVSGDGQTGVLNSQLA
                     QQLQVKVADQFGNGVAGVAVAWAATGGTVSSASVQSDGSGISAVTVTVGGSAGPVTVT
                     ATADGLTGSPVTFNETAATAPPIPTTASVSVGNIFFKSGHNGLSNPATDTVAVGGTVT
                     WTWVGGSHSVVSTGTQQFTGSGLAQSSGTYQFTFNTAGSYTYICGVHGAAMNGRVVVL
                     TP"
BASE COUNT          333 a          623 c          590 g          351 t
ORIGIN      
        1 agtccccggc tcccgtcctt ccgctggacg tcgacggcca gccccaggcc gataccatcg
       61 ggctgtaccc ggtgcggagt cccatcgatc accgcgaacg tctgggccat ggcgggctgt
      121 tgcttggccg cctgcacgat ggcgtacgcg atgagatgag tgaaggagat cttgcccgac
      181 tttcctgcga cctggatggc ggagttgagc gctccgcggc ggtcctcgag cagcgcgacc
      241 ggcagcacgc ggaacgtggt ggcagtggga accgagaggc tctcggtcat gttggccacg
      301 agtttggcgg cagggccttt gataggttcg gcagcggggc tgcggggcaa aggggcagcc
      361 tgaacggcgc gctgctccgt cagcccggtg tttacctgcc ccgctgcccc gccgccccgc
      421 tgccccgctt ccggtacccc gttcccttcg cctatcacgc cgctttcgaa cagcctcctc
      481 cactccgggg caaccgcccc gggctcacgg agatactcct cgtacattgc ctgggcaaac
      541 ccggcattgg ccgtctggaa gacatttgga tccacgagtc acatcctgcc ctgtggggcc
      601 tgtcggctca aatccggcat ttcacagttg acaaaggaag ttggccgcaa tctctcaaag
      661 ataacggctt cgccggtgtt atctggataa cttgcagacc ggcttcccgc cggtatcctt
      721 ggtcgaggag tcgcgagtca agagccacga gtcacggttg ccagtccagg gtcgggagtc
      781 agggtctgag ttccagaccg cgactcgcga ctcgcgacct ttgactctat ccgtcccctc
      841 aagcatcggc aggcgtatgc tccgactttg cgccaatcgg ctgaccccag gcgcggttct
      901 cttcggaatt ctcctcagct cctgtggtgg gggcggagat ggaggaactg gcactccacc
      961 ttctaccacg gtcattgcca aggcttcggc caacaacggc gatgcgcaaa ccggaacagt
     1021 tggtcaagca ctgccgacac cactgcaagt ggtggtcacc gatgccgggg cggccagcgt
     1081 gggtacaacc gtgacctggg caactcgatc tggcggaacg gtgaacccaa cctcggcggt
     1141 gaccgacgcc aacggcgctg ccactaccac ctggacgctg gggacaacct cgggttcgca
     1201 agccgctacc gcgactctca gtggggccag tggctcccca gtcaccttta gtgccaccgc
     1261 aaatccggac gccgccactg gactgtctct ggtcagcggc gacggccaga ccggcgtgct
     1321 gaactcgcaa ctcgctcaac agcttcaggt caaggttgcc gatcagtttg ggaatggagt
     1381 cgccggagtt gccgttgcct gggccgcgac cggcgggacg gtatcttccg cctcggttca
     1441 aagcgacggt tccggaatct ctgcggtcac cgtgacggtt ggcggctccg ccgggccggt
     1501 gacggtaacg gcgaccgccg atggcctcac cgggtcgccg gtgacgttca acgaaaccgc
     1561 agcgacagcg ccaccgatcc ccacgaccgc ttcggtcagc gtcggaaaca ttttcttcaa
     1621 gagcggacac aacggcctgt ccaatccggc cacggatacg gtggcggtcg gcggcacggt
     1681 gacctggacc tgggtcggag gcagccacag tgtggtctcg accggtactc agcagtttac
     1741 tggaagtggt ttggcccaaa gcagcggcac ctatcagttc accttcaaca cggcgggaag
     1801 ttacacctat atctgcggag tccatggagc tgcgatgaac ggccgcgtcg tcgtactcac
     1861 cccctaaggt ccgcctgcag cttagtcttc cagctgc
//
LOCUS       DASRPQ010000148         1456 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1581295, whole genome shotgun sequence.
ACCESSION   DASRPQ010000148 DASRPQ010000000
VERSION     DASRPQ010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1456
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1581295"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1422)
                     /locus_tag="VFD73_01730"
     CDS             complement(<1..1422)
                     /locus_tag="VFD73_01730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72751.1"
                     /translation="MLAVLPFKNMGAAGDQYFADGLTEEITSRLAGISDLGVVSRTST
                     DAYKGSSKSIRQIGQELGVGYILEGSVRWEKASDGSSRVRVTPQLIRVEDDRHLWTDR
                     YDAELADVFQVQSSIAERVTSAMDLALDPAEKRTINERPTENTEAYDFYLRGIEYANR
                     GFGREDIHNSIQMFRRAIALDSGFAQAWARLSQARSSEYWFFYDRTQAALSEAKAAAE
                     QSLRLRPDLPDPHVALGYFYYWGKLDYDHALQELAKARERQPNNPDLVFATAAVQRRQ
                     GRWAEAVANFERAVQLNPRSSEVIRNLSETYLLVRKYDLSCSTADRAISIGPDIAAVR
                     WTKILCLVLRDSVPQARQSLHDAVNAVDFVQMSRLAAGSGAVASFAVSPTFLLVDDSM
                     YQAKLEQLTPTEFTDTLGLYSLKAEVYRAKSQAGMQRTYLDSARTILESQVQAHAEEA
                     NFHSQLGLIYAYLGRKSEALREGQ"
BASE COUNT          268 a          452 c          434 g          302 t
ORIGIN      
        1 ttgaccttcc cgcaacgctt cggactttcg tccgagatag gcgtagatca gaccaagctg
       61 agagtggaag ttggcctcct cggcgtgggc ctgaacctga gattccagaa tggtccgtgc
      121 ggaatccagg taagtccgct gcatccctgc ctgactcttc gcgcggtaga cttcggcctt
      181 gagactgtag agtccgaggg tatcggtgaa ctccgtgggc gtcagctgtt ccagcttggc
      241 ttgatacatt gagtcgtcga ccaacaggaa cgttggcgat accgcgaagc tggccaccgc
      301 gccgcttcca gcggccagcc gactcatctg cacgaagtct accgcattca cggcgtcgtg
      361 aaggctctgc cttgcctgcg gaacgctgtc ccttaataca agacatagga tcttcgtcca
      421 tcgaacggcg gcgatgtcgg gaccgatgct gatcgctcga tcggcggtcg agcatgacag
      481 atcgtacttg cgtaccagca ggtaggtctc cgagagattg cggatcacct cgctcgatcg
      541 cgggttcagc tgaaccgccc tttcgaaatt tgcgaccgct tcggcccagc ggccctgccg
      601 ccgctgaacc gccgcagtgg caaagaccag gtctggatta ttgggttgtc gctcgcgggc
      661 tttggcgagc tcctggagcg cgtgatcata gtcgagcttg ccccaatagt agaagtaacc
      721 caatgccacg tgcgggtcgg gcagatcggg acggagccgg agcgactgct cggcggccgc
      781 cttcgcctca gacaacgccg cttgggttcg atcatagaag aaccagtact cgctggaccg
      841 tgcctgcgac aatctggccc aggcctgcgc gaaaccggag tccagcgcaa tggctcggcg
      901 gaacatctgg atcgagttat ggatgtcctc ccgaccaaag ccacgattcg cgtactcgat
      961 gccgcgcagg taaaagtcat acgcttcggt attttccgtc ggccgctcgt tgatggtccg
     1021 cttctccgcg ggatccagcg caaggtccat cgcgctggtc acccgctccg cgatgctgga
     1081 ctgcacctgg aacacatctg ccagctccgc gtcatatcgg tcggtccaga ggtgccgatc
     1141 atcctccacc cgaatgagct gaggggtcac gcgaactcgg ctgctcccat ccgaagcttt
     1201 ctcccagcga acacttccct ccagtatgta gccgacaccc agctcctgtc cgatctgccg
     1261 gatgcttttg ctgctgccct tgtaggcatc tgtgctggta cgggagacca cgccgaggtc
     1321 ggagattccg gcgagacgac tggtaatttc ctcggtgagt ccgtcggcga agtactgatc
     1381 accggcagcg cccatgttct tgaagggaag caccgccagc atcttggttc ctgccggttc
     1441 ggccgggcgg cggcta
//
LOCUS       DASRPQ010000149         3437 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_642125, whole genome shotgun sequence.
ACCESSION   DASRPQ010000149 DASRPQ010000000
VERSION     DASRPQ010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3437
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_642125"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1317
                     /gene="secD"
                     /locus_tag="VFD73_01735"
     CDS             <1..1317
                     /gene="secD"
                     /locus_tag="VFD73_01735"
                     /inference="COORDINATES: protein motif:HMM:TIGR01129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HZI72752.1"
                     /translation="ITDKTNALEKALPAMDRTLRGLGIKGAAEPTKPSAVEQLLGGDT
                     AHQSPKDSAAGKSKPAAASKKTAAPKPDSAKADSVASSPGVLAGLIQSAATAGAGGVP
                     GEYLVPETAYLRVDSLLSIPAVARQLPRGITLRWSAAPTSVGVQPVRFLYALEDKNIV
                     TGSNLVNAQAQLDPLTNGPIVTFELDRAGGRKFGEETGKHIGDYMAILLDGRVQGRPP
                     VIQSRIGRNGQITLGGKTLQEAQDLALTLKAGALPIPLKIVEERQVGASLGSDSIHKG
                     ITAGIVGTILVVLIMVIFYRLSGVLAVVALGLYILFTLGALSMVDATLTLPGLAGIVL
                     SIGIAVDANVLIFERIREELLHGKTVRTAIDEGFRHAMNAIVDSNVSTVLTALFLFQF
                     GTGPVKGFAVTLILGIIASMITAVFVTRTFFMIWLQRRPALSTLSI"
     gene            1319..2302
                     /gene="secF"
                     /locus_tag="VFD73_01740"
     CDS             1319..2302
                     /gene="secF"
                     /locus_tag="VFD73_01740"
                     /inference="COORDINATES: protein motif:HMM:TIGR00966.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HZI72753.1"
                     /translation="MLRLFSNAHYDFIGVRRYAYALTAAILIPGLIFLLVAGLNYSIE
                     FTGGTLLQIRSQHPVDVAQLRTGLDREGIHGAEIQNFGSQDEYVIRARVAKPGSDAND
                     TQATAKAVSIALDNVLGAGKYTVLRTEAVGPKVGGELRQKAFLAIFLSFFAVLAYLAY
                     RFEWRFGLAAVIATAHDILATIAFIGVLRLEVSLTVVAAVLSMVGYSLNDTIIIFDRV
                     RENLRKHKHESFEQILNRSINETLPRSVLTHGTSLATLAALAVFGGEVIRPFALVMFF
                     GVFTGTFSSIYIASPVLMAIEKRWPGPAARGHLAARKPAPAGAARKPQTVG"
     gene            2391..3149
                     /locus_tag="VFD73_01745"
     CDS             2391..3149
                     /locus_tag="VFD73_01745"
                     /inference="COORDINATES: protein motif:HMM:TIGR00010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HZI72754.1"
                     /translation="MLIDTHCHLADAAYASDLPEVLERTWSAGVSRVVVVGESRASAE
                     RALSLAAGEPRLVATAGIHPHNAKSWNPEVEAWLREIVRDPRIVAVGETGLDFHYDHS
                     PRETQLAAFDAQLGLAAEIGKPAVIHARDADEEVAALLEAHPATTAILHSFSSGMRLL
                     RVGLLHRHYVSFSGMVTFKNWQLDDAIRETPIDRLLLETDGPYLAPVPHRGKRNEPGF
                     VRHVAERVATVRGLAVEDLIAETGNNAQRVFQLD"
     gene            3163..>3437
                     /locus_tag="VFD73_01750"
     CDS             3163..>3437
                     /locus_tag="VFD73_01750"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004329 - formate-tetrahydrofolate ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HZI72755.1"
                     /translation="MATAATAAKVPSDIAIAQGAKLRPIADVAAEVGLTADEILSYGR
                     YKAKISAEAIARRKPKGRLVLVTGINPTPAGEGKSTVTVGVSQALRRL"
BASE COUNT          614 a         1073 c         1086 g          664 t
ORIGIN      
        1 atcaccgaca agaccaatgc gctggaaaag gcgcttccgg cgatggatcg cacccttcgt
       61 gggttgggca tcaagggcgc ggccgagccc acaaaaccgt cggccgtcga gcaactcctg
      121 ggcggagaca cggctcacca gtcacccaag gattcggctg ccggcaagag taaaccggcc
      181 gcggcgtcca agaagactgc cgctcctaaa ccagacagtg cgaaggcgga ttctgtggct
      241 agctcgcccg gcgtgctcgc cggattgatc caatcggccg ccactgccgg cgccggcggg
      301 gtaccagggg agtatctggt gccggagacg gcatacctca gggtcgatag tctcctcagc
      361 attccggcgg tggctcgtca gcttccccgc ggaattacgc tgcgatggag tgccgcgccc
      421 accagcgttg gggtgcagcc ggtcaggttt ctctatgcgc tggaagacaa gaacatcgtg
      481 accggcagta acctggtcaa cgcgcaggcg cagctcgatc ctctgaccaa tggtcctatc
      541 gtcaccttcg agctggatcg tgccggcggc cggaagttcg gcgaagagac cgggaaacac
      601 atcggcgact acatggccat tctgctcgat ggccgggtgc agggaaggcc cccggtaatt
      661 cagagccgca tcggacggaa cgggcagatc accctcggtg ggaaaacctt acaggaggcg
      721 caggacctgg cgctcacgct caaagccggc gcgctgccga tcccgctgaa gatcgttgag
      781 gagcggcagg tgggcgccag tctcggttcc gattcgattc acaaaggcat caccgccgga
      841 atcgtcggca ccatacttgt cgtgttgatc atggtcatct tttaccggct gagcggtgtc
      901 ctggcggtgg tcgcgctggg gctctatatc ctgttcacgc tcggggcgct ctcgatggtc
      961 gatgcgacgc tgacgctgcc gggactggcg ggcatcgtcc tctccatcgg catcgccgtc
     1021 gatgccaacg tgctgatctt cgaacgcatc cgcgaggagc tattgcacgg gaagacggtg
     1081 cgcacggcaa tcgacgaagg atttcggcac gccatgaatg ccatcgtcga ctcgaacgtg
     1141 agcaccgttc tgaccgcgct cttcctcttt cagttcggta ccggtccggt caagggattt
     1201 gccgtcaccc tcatcctggg catcattgcc tcgatgatca ccgcggtctt cgtcacccgc
     1261 acattcttca tgatctggct gcagcggcgt cctgcgctct ctaccctgag catctgatat
     1321 gctgagactc ttttccaacg cgcactacga cttcatcgga gtccgccggt acgcgtacgc
     1381 gttgactgct gcgattctca ttcccggcct gatctttctc ctggtagcgg ggctgaatta
     1441 cagcatcgag tttaccgggg ggacgctgct ccagatccgg agccagcatc ctgtggacgt
     1501 cgcgcagctg cgaaccggtc tggaccgtga aggcattcac ggcgctgaga tccagaactt
     1561 cgggtctcag gacgaatacg tcatccgggc ccgggtggcc aagccgggca gtgatgccaa
     1621 cgacacccag gccactgcca aggccgtgtc tattgcgctc gacaatgtgc ttggcgccgg
     1681 caagtacacg gtgctccgga ccgaggcggt gggcccaaag gttggtgggg agcttcggca
     1741 gaaagcgttt ctcgcaatct ttctctcctt ctttgccgtg ctggcctacc tcgcgtaccg
     1801 gttcgagtgg cgattcggcc tcgccgcggt gatcgccacc gcccacgaca tcctggcgac
     1861 gattgccttc atcggcgtac ttcggctgga agtcagtctg acggtcgtgg ctgcggtgct
     1921 ctcgatggtg ggctactccc tgaacgacac gatcatcatc ttcgatcggg ttcgggaaaa
     1981 cctgcgcaag cacaagcacg aaagcttcga gcagatcttg aaccgctcga tcaacgagac
     2041 acttccccga agcgtgctga cccacggcac atcgctggca accttggcgg cgctcgccgt
     2101 gttcggcggt gaggtcatcc gtccatttgc cctggtgatg ttcttcggcg tgttcaccgg
     2161 gactttctcg tcgatctaca tcgcctcacc agtgctgatg gcgatcgaga agcggtggcc
     2221 cggccctgct gcacgcggac acttggcggc cagaaaacct gctccggcgg gtgccgcgcg
     2281 gaagcctcag acggtcggct gagcagctcg gtttccgtta gccatctgcc acaaccggtt
     2341 ttggttgagt cggttctcgt cggtgtggtc gcgctgccct gcgcttattc gtgctgatcg
     2401 acacccactg tcacctggcg gatgccgctt atgcgtccga tctccccgag gtgctcgagc
     2461 gaacctggtc ggcgggggtg agccgggtgg tggtcgtggg agagtcgcgg gccagcgccg
     2521 agcgagccct cagcctcgct gccggcgagc cgaggctcgt ggctacagcc ggcattcacc
     2581 cccacaatgc caagagctgg aatcccgaag tggaggcgtg gctccgcgag atcgttcgag
     2641 atccccgcat cgtagccgtg ggcgaaacgg gcctcgattt tcattacgat cactcaccgc
     2701 gtgagaccca gctcgccgcg ttcgacgcgc agctcgggtt agcggccgaa atcggcaaac
     2761 ccgccgtcat ccacgcccgg gacgctgacg aggaggttgc ggcgctgttg gaggcacatc
     2821 ccgccacgac ggcgatcctg cactcgttca gcagtgggat gcgactcttg cgggtggggc
     2881 tgctccaccg ccactatgtg tcgttcagcg ggatggtgac gttcaagaat tggcagctgg
     2941 atgatgcgat tcgggaaacc ccgatcgatc ggctgttgct tgaaaccgac ggaccttacc
     3001 tggcgccggt gccgcatcgg gggaaacgga acgaaccggg atttgtccgc catgtggccg
     3061 aacgggttgc gacggtgcga gggctggcag tcgaggacct gattgctgag accggcaaca
     3121 atgcccagcg ggtatttcag ttggactgag gagcaatagt tcatggccac tgcagccact
     3181 gcagcgaaag ttccctccga tatcgccatc gcgcaggggg cgaagctccg gcccattgca
     3241 gacgttgcgg ccgaggtcgg cctcactgcc gacgagattc tttcctatgg ccggtacaag
     3301 gccaagatca gcgctgaggc aatcgcgcgc cgaaagccga agggccggct ggtgctcgtc
     3361 accggcatca accctactcc cgccggcgag ggaaagagca ccgtgaccgt tggcgtcagc
     3421 caagccctac gccgtct
//
LOCUS       DASRPQ010000150         3195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_14389, whole genome shotgun sequence.
ACCESSION   DASRPQ010000150 DASRPQ010000000
VERSION     DASRPQ010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3195
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14389"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..474
                     /locus_tag="VFD73_01755"
     CDS             <1..474
                     /locus_tag="VFD73_01755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72756.1"
                     /translation="LRDYQCAGAGAGGSYSFDQNNLDWSGSVLLFSQYQLDNYRAGHP
                     NQNFRVIALEDDDTGCVIKFDADRFRNVLTTIQSLYPNLTGAKDTTSGLVKFVKRANA
                     LQKILRAVYSFITTQDDFIGNAMEDVVVGEFHSGANWIVKGESNKTNGWLKLEMH"
     gene            478..1101
                     /locus_tag="VFD73_01760"
     CDS             478..1101
                     /locus_tag="VFD73_01760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72757.1"
                     /translation="MRTTLRQQTPLLWSILSLAWCSPLVGQWRIGAEVGVSRFWGGSQ
                     DTGGDHTSVRPYRPTTFGLGLQRQYGRYAIGLQVQYAEASLGLQGPEAVVAVNGAFTI
                     VSISPELAVRIATVGPGNQLRLHAGPLFEVWDIIDQDSRTRLGFQGAVSLDVPLGERL
                     VGTVVGGGAVTPSPYKDGELDLGGGAPSYDLRPLWRRRFALGIGYRL"
     gene            complement(1112..1657)
                     /locus_tag="VFD73_01765"
     CDS             complement(1112..1657)
                     /locus_tag="VFD73_01765"
                     /inference="COORDINATES: protein motif:HMM:NF024183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HZI72758.1"
                     /translation="MLGEALAAAIVGCVVLWLVLQPLIRPAAPRPPVYEPLDPEETAK
                     GIALTALKEIEFDRETGKLSDPDYQLLKAKYTAAALEALRQEPEAGTHRVSDDVEAMI
                     AAKVRALRSASATTSSNTSVPLAVLAPACSSCGPRPEADAVYCSSCGRRLPLRAACDR
                     CGTTLPPGSRYCESCGRQVAA"
     gene            complement(1658..2275)
                     /locus_tag="VFD73_01770"
     CDS             complement(1658..2275)
                     /locus_tag="VFD73_01770"
                     /inference="COORDINATES: protein motif:HMM:NF015853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HZI72759.1"
                     /translation="MNDLPIGQRHLSRRAFLQSGLGAAAMLAGAHSLRAQQPDSLAGR
                     GAMGTLRDPTAVGRLQQPTDPNENSAEIQAIEKRLACNCGCTLDVFTCRTTDFSCTYS
                     PKLHREVLALRASGKTAQQILDAFVAKYGEKALMAPEPHGFNLTGYFLPGAAIAAAGA
                     GLLLFISRRKAAVAGGSVEPVAVVTPGGTPEEMERLRRELGALED"
     gene            complement(2272..>3195)
                     /locus_tag="VFD73_01775"
     CDS             complement(2272..>3195)
                     /locus_tag="VFD73_01775"
                     /inference="COORDINATES: protein motif:HMM:NF027651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis CcmF C-terminal
                     domain-containing protein"
                     /protein_id="HZI72760.1"
                     /translation="FPILSELVRGTKITVGAPFFNRVNVPLGLLLLALTGIGPLIAWR
                     KASTANLRRQFVAPTLSGLLTLVGLYAAGMRDFYALCALSLAGFVAGTIVQEFYRGIR
                     ARRRMHGESAAVAFARLIARNRRRYGGYIVHAGILIYFIAFSGMAFQREQEATLKPGQ
                     AVEMRSPFGHTYRFTHLGVSQFEALNRIVSAATVEVSKDGRPAGIMTSEKRQHVDSFK
                     RPTFEPSTEVGIRSNLQEDLYIVFAGSVEGTEQAVYRFNINPLVWWVWFGGAVLMVGG
                     LITLWPGGGPVSRPRPAQAGYEVTLVEAGRP"
BASE COUNT          619 a         1013 c          983 g          580 t
ORIGIN      
        1 ctgcgagact atcagtgcgc aggtgcgggt gcgggcggat cctacagctt cgatcagaac
       61 aatctggact ggagcggcag cgttctgctg ttcagccaat atcagctcga caattatcga
      121 gccggccacc ccaaccagaa ctttcgcgtc atcgcgctgg aagacgacga caccggctgc
      181 gtcatcaagt tcgacgccga tcgctttcgc aatgtgctca cgacaatcca gagtttgtat
      241 cccaacctga ccggggccaa ggacaccacc agcggactcg tgaagtttgt aaagcgggct
      301 aacgcgctgc agaagatcct gagggcggtc tactcgttca tcaccacgca ggacgatttc
      361 attgggaatg ccatggaaga cgtggtcgta ggcgagttcc actccggagc aaactggatt
      421 gtcaaaggcg agagcaacaa gacgaacggc tggctcaaat tggagatgca ctgacctatg
      481 cgaaccaccc ttcggcaaca gactcccctt ttgtggtcta tcctctcact cgcctggtgt
      541 tcgccgcttg tcggacagtg gcgcataggc gcggaagtcg gcgtcagtcg tttctggggc
      601 gggtcccagg acaccggtgg cgaccacacc tcggtcagac cgtaccgccc caccaccttc
      661 ggcttgggac tgcagcgtca atacgggcgc tacgccatag ggctacaagt gcagtatgcg
      721 gaagcaagtt tggggctgca ggggcctgag gcagtcgtcg ccgtcaatgg tgcgttcacc
      781 atcgtaagca tctcgcccga actggccgtt cggatcgcaa cggttgggcc cggtaaccag
      841 ctccgcctcc acgctggtcc actgttcgag gtgtgggaca tcatcgacca ggactcgcgt
      901 accagactcg gatttcaggg cgcggtgtcg ctggatgtgc cgctgggcga acgtcttgtt
      961 ggaacggtgg tgggcggggg tgccgtcacg ccttcgccat acaaagacgg agagctcgat
     1021 ctgggcggcg gcgccccatc gtatgatctc cggccccttt ggcgtcgtcg ttttgcgctg
     1081 ggaatcggct atcgactctg atacgctgga ttcaggcggc cacctgtcgg ccgcagctct
     1141 cgcagtaacg actgccgggc ggaagcgtag ttccacatcg gtcacaggcg gctcggagcg
     1201 gcaggcggcg cccacagctg gagcagtaca ccgcgtccgc ttcgggccga ggaccgcagc
     1261 tcgaacaggc tggagccaag actgcaagcg gtaccgaagt gttcgatgat gtcgtagccg
     1321 aagcggagcg aagcgcgcgc actttggcgg caatcatggc ctcgacatca tcggagactc
     1381 ggtgcgttcc ggcctccggt tcctgtcgca gcgcttccag cgccgccgcc gtgtacttgg
     1441 cctttaaaag ctggtaatcc ggatccgaca gctttccagt ctcacgatcg aactcgatct
     1501 ccttcagcgc cgtcagagca attcccttag ctgtttcttc cgggtcaagc ggctcgtaca
     1561 cgggcgggcg cggcgcggcc gggcggatca acggctgcaa gaccagccac aggactacac
     1621 acccgacgat cgccgccgcc agggcttcgc ccaacattca atcctcgagt gcgcccagct
     1681 cgcggcgcag acgctccatc tcttccggcg ttccgccggg cgtcaccacc gcaaccggct
     1741 cgacagatcc accggccacc gctgccttac gccggctaat gaagaggagc agccccgctc
     1801 ccgctgcagc aattgccgcc ccagggagga agtagcccgt cagattgaag ccgtgcggct
     1861 ccggcgccat gagtgccttc tcgccatact tggcaacgaa cgcgtccaga atttgttgcg
     1921 cggtcttccc gctggctcgg agcgccagga cttcgcggtg gagcttggga gagtaggtgc
     1981 aggagaaatc ggtcgtgcgg caggtgaaga catcgagagt acagccgcag ttgcaggcca
     2041 agcgcttttc gatagcctga atttctgcac tgttctcgtt cgggtccgtc ggctgttgga
     2101 gccggcctac tgctgttgga tcgcgcagcg ttcccatggc gccgcgccca gccagcgaat
     2161 ccggttgctg tgcgcggagc gagtgggccc cggcaagcat cgctgctgct cccagtccgc
     2221 tctggagaaa cgcccggcgg gagagatgcc tttgcccgat agggagatcg ttcacggccg
     2281 gccggcctcc accagagtca cctcgtaccc tgcttgggcc ggtcgcggac gggacaccgg
     2341 gccgccacca ggccaaaggg tgatcagacc ccccaccatc aatacggcac cgccaaacca
     2401 gacccaccag acgaggggat tgatgttgaa ccggtacaca gcctgttcgg tgccctcgac
     2461 cgatccggca aaaacgatat acagatcctc ctgcagattg cttcggatcc cgacttcggt
     2521 cgatggctcg aaggtcggcc gcttgaagct gtccacgtgc tggcgctttt cactggtcat
     2581 gatgccggcc ggccgaccat ccttggacac ctccaccgtg gcggccgata cgatccgatt
     2641 cagcgcttcg aattgggaga cgccgaggtg ggtgaatcgg taggtatgcc caaagggact
     2701 cctcatctca accgcctgcc ctggcttcaa ggtggcttcc tgttcccgct gaaaagccat
     2761 gccggaaaag gcgatgaagt agatcaggat ccccgcatga acgatgtacc cgccgtaccg
     2821 ccggcggttc cgagcaatga gccgggcgaa tgccacagcg gcagactccc catgcattcg
     2881 ccggcgggcc cggatcccgc gatagaattc ctggacgatg gttcccgcca cgaatcccgc
     2941 caggctgagg gcacagaggg cgtagaagtc ccgcatgccg gccgcataca acccgaccag
     3001 cgtcagcaat cccgagagag taggagcgac gaactgccgg cgaaggttgg cggtggacgc
     3061 ctttcgccac gcgatcaacg gccctatccc cgtcaatgcc agcagtaaca gtcccagcgg
     3121 cacgttgacc cggttaaaga agggagcgcc tacggtgatc tttgttccgc gcacgagctc
     3181 ggagaggatc ggaaa
//
LOCUS       DASRPQ010000151         1323 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1900633, whole genome shotgun sequence.
ACCESSION   DASRPQ010000151 DASRPQ010000000
VERSION     DASRPQ010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1900633"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            221..1156
                     /locus_tag="VFD73_01780"
                     /pseudo
     CDS             221..1156
                     /locus_tag="VFD73_01780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_045243001.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT          233 a          402 c          422 g          266 t
ORIGIN      
        1 tatatggccg ttttctgagg gtcagcttag cggatgattt ttcggctcaa ccgtttgatg
       61 cggttctcag gatcctgcgt tccccatgga tatcgcggcg cggcctgtgg cgcattcggt
      121 gctacagtga aggtccaccc ggtcgccgtc cgcacccccg gcctcgcata atacaagact
      181 ggggtatcca tttaaccgga gctaggcgca taatggctct atggagctcc cgcgcgcagg
      241 aattcactat cctggttctc tgggcgagtt ccagacgtgg ttccagaccg acgctgactg
      301 cctggactat ctcgagtggc tacgatggcc gtccgagttt gtctgccctg aatgcggcca
      361 cgccggtggg tggcgtctgg gcgatggtag attcatgtgt gcggactgtg gaagccgtac
      421 atccgtgacg gcgggaacca tcttcgaccg aacccgcaca ccgcttaccg tctggtttgc
      481 tgcctgttgg agcttcgcgt ccggtaaaga cgggatttcg gctttgagcc tgaaacgcac
      541 cttggaaatc ggctcgtacc agacggcttg ggccatgctg cactggttac gatccgtgct
      601 ggttcgtccc gatcgggaac tcctacgcgg cagggtagag gtggacgaaa cctacatcgg
      661 tgggctcgat cccgggttgg ctgggggtcg cgcccaaggg aagaaggtcc tgacgtgtgt
      721 cgcggtcgag atcatcgagc ccaagggatt cgggcgctgc cgtatgacgc ccgtgacgga
      781 tgcctcggca gagtcgctgc tggccttcgt gtcggcgaac gtcgagccgc ggaccacggt
      841 gatcaccgat gcttggcagg gctaccgagg actggaaaga aagggctata tccacgaccg
      901 ccgcagccag cgggcagcca gtgctcgcgg cgaagacccg gccgcgctgt tgcctggcgt
      961 gcatcggatc gcgtctctgg caaaacgctg gctgctcggc acccaccagg gagcagtgga
     1021 cgctgcgcac ttgcccagct acctcaacga gtttgtgttc cgtttcaacc gccgacactc
     1081 acgtagccgc ggcatgctgt tctacagagt cctggagctc gccgtcgccc attcccccgt
     1141 gcgctaccgg gaccttgcgc tgacgaaaag ccccaaggcc aaacggccca agccgccggc
     1201 gaaacgcggg catcctccaa gcctggagcg ccctcggcag gaccgacctt ggagaggtcg
     1261 caactccggt taaatggata ccccggagcg ggtttatcag aggtgaggcg gcgcttcttt
     1321 cca
//
LOCUS       DASRPQ010000152         1142 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1581769, whole genome shotgun sequence.
ACCESSION   DASRPQ010000152 DASRPQ010000000
VERSION     DASRPQ010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1581769"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            248..>1142
                     /locus_tag="VFD73_01785"
     CDS             248..>1142
                     /locus_tag="VFD73_01785"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HZI72761.1"
                     /translation="MTKKLHILHLEDDHLDLELVSGALEQAKLSFEINVASTEAEYRQ
                     ALEVASPDVIIADSSVLGFDALSAMRLARARLGPVPFIVVSGLLNAQQRTRCLAAGAN
                     GCVAKSALADLAGTILRCLEEAGPIVPASHWYARAMEKLVAVIQELSLARDLPRIMEI
                     VRRSARELTGADGATFVLRDGEQCHYADEDAIAPLWKGRRFPMTSCISGWAMLNRQAA
                     VIEDIYADPRIPAEAYRPTFVKSLVMVPIRTADPVGAIGNYWAARRKPRPEEVKLLQA
                     LADSTSVAMENVQLYAGLERKV"
BASE COUNT          199 a          361 c          385 g          197 t
ORIGIN      
        1 cgcggcggcg gaccgcgtgc ccgcgtcgtt gccggtcccg cgaccggccc tctggccgac
       61 aaaccgcctg gccagcgtga gtcccgtcga ccgtatcccg ccccgtttct caagcgtttc
      121 ccagccgtca ccgatgtact ctgttggggc gatgggattt cctaggatga cagagtagga
      181 aaatgggggg atactgactc tcgggtgacc ccaggggcgc gtggttgatc gagctgttcc
      241 agacgtaatg acaaagaaac tacacatcct gcacctggag gatgaccact tggacctgga
      301 gttggttagc ggggccctcg agcaggccaa gctcagcttc gagatcaatg tggccagcac
      361 ggaggcggag tatcgtcagg ccctggaagt ggcttcgccc gatgtgatca tcgccgacag
      421 ctcggtgctt ggattcgatg ccttgagcgc gatgcgcctc gcccgggccc ggctggggcc
      481 ggtgccgttc atcgtggtga gcgggctgct caacgcccag cagcgcaccc gctgcctggc
      541 cgccggagcg aatggttgcg tggccaaatc agcgctggcg gacctggccg ggaccatcct
      601 tcgctgcctc gaggaagccg gcccgatcgt ccccgcttcc cactggtacg cccgggcgat
      661 ggaaaaactg gtcgcggtca tccaggagct ttccctcgcc cgcgacctgc cccgcatcat
      721 ggagattgtg cgacgctccg cccgcgagct gacgggcgcg gacggcgcca ccttcgtcct
      781 gcgcgacggc gagcaatgcc attacgcgga cgaagacgcc atcgcgcctc tctggaaggg
      841 acgccgtttt ccgatgacga gctgcatcag cggttgggcg atgttgaacc ggcaggcggc
      901 ggtgattgag gacatctacg ccgatccgcg cattccagcg gaggcatatc gtccgacatt
      961 tgtgaagagc ctggtgatgg tgccgatccg gacggccgac cccgtgggtg ccatcgggaa
     1021 ctactgggcg gcgcgacgaa agccccgccc ggaggaggtg aaactcctgc aggcgctggc
     1081 agacagcacg tccgtggcca tggaaaacgt gcaactgtac gcagggttgg aacgcaaggt
     1141 cg
//
LOCUS       DASRPQ010000153         1779 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3462792, whole genome shotgun sequence.
ACCESSION   DASRPQ010000153 DASRPQ010000000
VERSION     DASRPQ010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3462792"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..899
                     /locus_tag="VFD73_01790"
     CDS             <1..899
                     /locus_tag="VFD73_01790"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HZI72762.1"
                     /translation="VQSAENVSQFDLDGDTATTFDNEMFGNNSFRHFSREITDWAGSV
                     GLNFAVRKNLALYAAGARGYKMPALDGFVNAVAQEQVDLFDAEEVQSLEAGVKAQVAN
                     VAFTFDGFYAGLRNLIGQGVELDSLTGAARWVIEREPETRSYGAEMETVAFPMNGLQL
                     FGNATLLQAEFSTGADVGRRIIGVPRTIGNLAAVYSRGGAELKADFHWVASRPVEVGR
                     GTTLPAYSYFNFGLGYALPGGGARIDADLLNAFQAKGLEEGNPTAQSVPGSGLFLARP
                     ILPRRVTISLRYELGGHAPAQP"
     gene            1121..1516
                     /locus_tag="VFD73_01795"
     CDS             1121..1516
                     /locus_tag="VFD73_01795"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72763.1"
                     /translation="MRSQLQEGLGGSYVLERELGRGGMATVYLARDLKHDRPVALKVL
                     HAELASTLGPERFQREIQLAARLEHPHILTVLDSGAATVAGGQRLWFTMLEPLLTVPY
                     FLSPGWLRVDPTFDPLRSNPRFKRLAESG"
BASE COUNT          309 a          544 c          616 g          310 t
ORIGIN      
        1 acgtgcagag cgcggagaac gtctcccagt tcgatctgga cggtgacacg gcaaccacct
       61 tcgacaacga aatgttcggc aacaacagct tccgccactt ctcccgcgag atcaccgact
      121 gggcgggttc cgtcggtctc aacttcgccg ttcggaaaaa cctcgcgctc tacgcggcgg
      181 gtgcgcgggg atacaagatg ccggcgctcg atggcttcgt gaacgcggtg gcccaggagc
      241 aggtcgacct gttcgacgcc gaggaggtcc agtcgctgga ggcgggagtg aaggcgcagg
      301 tcgcaaacgt ggccttcacc ttcgatgggt tctacgccgg gctcaggaac ctgatcggcc
      361 agggcgttga gctggactcg cttaccggcg cggcgaggtg ggtcatcgaa cgggagccgg
      421 agacccgttc ctacggagca gaaatggaaa cggtcgcgtt tcccatgaac ggccttcagt
      481 tattcggcaa cgccacgctc ctgcaggcgg agttcagcac cggagccgac gtcggccgcc
      541 ggatcatcgg ggtacccagg acgatcggca atctggccgc ggtctattcc cgtgggggcg
      601 ccgagctcaa ggcagatttt cactgggttg ccagcaggcc ggtggaggtc ggtcggggaa
      661 cgacgctgcc ggcctacagt tatttcaact ttgggctggg ctatgctctg ccgggcggtg
      721 gcgcgagaat cgatgccgat ctgctgaacg ccttccaggc gaaaggactc gaggaaggca
      781 atcccacggc gcagagcgtg cccggctcgg gactgtttct cgcgcggccc atcctgccgc
      841 ggcgggtcac aatatcgctg cgctatgagc tcggaggcca cgcgccggcg cagccatgat
      901 acggtagccg cccttggacg gcgccggcac cgaggagggg gcgggaacgg tcttatcagg
      961 gtcggtcatc ggcctgtctg gatcggggat aatgaggcct aaagttagcc cgattggagt
     1021 gctgccatcg gcgtgccggc ggcaccttcc cccctttccg cggctccctc tataggaatt
     1081 ggccggtcac gccaccccga atcggttcct tatgacagac ttgcggtcgc agctccagga
     1141 aggcctgggc ggcagctatg tgctcgagcg cgagctgggg cgcgggggca tggccacggt
     1201 ctatctggct cgcgacctca agcacgaccg gccggtggcg ctcaaggtgc tgcacgccga
     1261 gctggcctcc acgctgggac ctgagcggtt tcagcgcgag atccagctcg ccgcgcggct
     1321 ggagcacccg cacatcctga cggtgctcga ctccggggcg gcgacggtgg ccggcgggca
     1381 gcggctctgg ttcaccatgc tcgagccgct gctcacggtg ccgtattttc tctcgcccgg
     1441 atggctgcgg gtcgatccca cgttcgatcc gttgcggagc aacccgcggt tcaagaggct
     1501 ggctgagtca ggctgagaac ggaaggacgg gcggccgatc tgcgcgcgat gcaccacgag
     1561 gtgcccggtg aggccgcggt gatatcattc cttcgaacct ctccgttttc ggtctctcaa
     1621 cggctggagt ccgcatgcca ttcaagagca aggcgcaacg cagaaagttt gcggagctcc
     1681 tggtcaaggg cgagatctcg gaagagacct tcgaggagtg gaatcgggag actgggagca
     1741 cgaagcttcc cgagcgggtt acaccgaagc cgcggaggg
//
LOCUS       DASRPQ010000154         1056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3158004, whole genome shotgun sequence.
ACCESSION   DASRPQ010000154 DASRPQ010000000
VERSION     DASRPQ010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3158004"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..260
                     /locus_tag="VFD73_01800"
     CDS             <1..260
                     /locus_tag="VFD73_01800"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HZI72764.1"
                     /translation="HKLPAVYFERAFITAGGLISYGPDLVDQFRRAAQYVDRILKGEK
                     PADLPVQAPTKYDVVINLKTAKALGLTVPQLLLATADEVIE"
     gene            complement(279..713)
                     /locus_tag="VFD73_01805"
     CDS             complement(279..713)
                     /locus_tag="VFD73_01805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72765.1"
                     /translation="MPGSKTTPGLAGARNDAPASVAFRGVNNVGTRVYNAFAAQWLAY
                     TLPYRRFAVILAEDCARIGGDVGCYSFIAVDSHHILLAGLPAHSLALRPAHSRGHQFV
                     TRYPKASDISSPPCLLRLLPAGAVAGWGLHPLESAALSRRTP"
BASE COUNT          220 a          295 c          364 g          177 t
ORIGIN      
        1 ggcacaaact gccggcggtc tatttcgagc gcgcttttat taccgccggc ggcctcatct
       61 cctacggtcc tgatcttgtc gatcagttcc ggcgtgcagc ccaatacgtc gatcgcattc
      121 tcaagggcga aaagccggcc gatctgccgg tgcaggcacc aactaagtac gacgtggtca
      181 tcaacctgaa gaccgccaag gcgctcggcc tcaccgtgcc gcaattgctg ctcgcgaccg
      241 cggacgaggt gatcgagtaa ggcaggcgaa atggccgctt agggtgtgcg ccgtgacaag
      301 gcggcgcttt ccagtgggtg caagccccac ccggcaaccg ctccagccgg aagcaaccgg
      361 agcaggcatg gaggagacga aatgtctgaa gccttcggat agcgggtcac gaattggtga
      421 ccgcgcgagt gtgcaggccg caacgcgagt gagtgcgccg ggagaccggc aaggagtatg
      481 tggtgagagt ccactgcgat gaaggagtag caacccacgt cgcccccgat ccgtgcgcag
      541 tcttccgcga ggatgactgc gaagcgtcgg taggggagcg tataggccag ccattgagcc
      601 gcgaaagcgt tataaactcg ggtgccgacg ttgttcactc cacggaaggc aacactggcg
      661 ggtgcgtcat tgcgagcgcc cgccagaccc ggcgtggtct tagaccctgg catgtacgga
      721 cgctccttgc gcgggaaccg ggagatctct ggatcggcca taggcgcagt tgtggccgga
      781 tggtccgtag cgggaaggtg aggagccgaa gccgctgatg cacgatccag agaagtctga
      841 ctccggcata gtgtgtgcct gacagctgac gtgtcaggtg ggttgaagtc ccgctcagcc
      901 cgaggccccg ggctgatatc caaagatggg ggtaatgcct catcggccga agatgatgga
      961 aaggtatgga gaggctagtg aggcacgacg gcgaaagccg ggacacggat aggctgacct
     1021 ggagccgcca tcggcgaatc ttcggagggc agggcg
//
LOCUS       DASRPQ010000155         5974 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2208494, whole genome shotgun sequence.
ACCESSION   DASRPQ010000155 DASRPQ010000000
VERSION     DASRPQ010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5974
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2208494"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..599
                     /gene="cysT"
                     /locus_tag="VFD73_01810"
     CDS             <1..599
                     /gene="cysT"
                     /locus_tag="VFD73_01810"
                     /inference="COORDINATES: protein motif:HMM:TIGR02139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HZI72766.1"
                     /translation="LLVAWVLVRYRFPGRRLIDAIVDLPFALPTAVAGIALTTLYATN
                     GWIGSALAPWGIKVSYTWLGITVALIFIGLPFVVRTVQPVLDDLEIEVEEAAASLGAR
                     RWQTFSRVVFPTIAPALLTGFALAFARAIGEYGSVVFISGNMPMKTEIVPLLIITKLE
                     QYDYAGATAVALVMLVASFLLLLLINLMQWAARRRVKA"
     gene            603..1508
                     /gene="cysW"
                     /locus_tag="VFD73_01815"
     CDS             603..1508
                     /gene="cysW"
                     /locus_tag="VFD73_01815"
                     /inference="COORDINATES: protein motif:HMM:TIGR00969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HZI72767.1"
                     /translation="MGTLALTQADAGAPRVLATGEVRWVRWSLIGIALLFLALCLVLP
                     LVLVFHQALSKGVSAYWNAIREPDALSAAKLTLLIASIAVPINLIFGVAASWCIAKFS
                     FPGRSLLVTLIDLPFAVSPVISGMIFVLLLGTHGWFGPWLQDHDIKIIFAVPGIVLAT
                     TFVTAPFIARELIPLMEEQGAEEEEAAIVLGAGGWQTFFRVTLPNIKWGLLYGLILCN
                     ARAMGEFGAVSVVSGHIRGETNTLPLHVEILYNEYAFASSFAVASVLTLLALVTLALK
                     TLVEWQQRRVNHTGDPEAVLERTAA"
     gene            1505..2569
                     /locus_tag="VFD73_01820"
     CDS             1505..2569
                     /locus_tag="VFD73_01820"
                     /inference="COORDINATES: protein motif:HMM:TIGR00968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter ATP-binding protein"
                     /protein_id="HZI72768.1"
                     /translation="MSIEVRNLRKTFGDFVALDNVSLEVPGGELVALLGPSGSGKTTL
                     LRIIAGLEPADQGSIHFHGEEATDQPVRERQVGFVFQHYALFRHMSVFENVAFGLRVR
                     PRRLRPSEASIRETVMGLLSLVQLDVLADRRPSELSGGQRQRVALARALAVKPKVLLL
                     DEPFGALDAKVRKELRRWLRRLHEEVHVTSVFVTHDQEEALEVSDRVVIMNAGRVEQS
                     GTPEEVYERPATPFVYGFLGDVNLFHGRIHQGRVDIGQGELLAPEWAGAKDQAGIAYV
                     RTYEVELDPAPTSGASLPAFVRHIRAFGPVVRLELDLVDGGKTIEAHLPRGRFNSLAL
                     TKGQRVYVSPTNVRVFAESG"
     gene            complement(2585..3490)
                     /locus_tag="VFD73_01825"
     CDS             complement(2585..3490)
                     /locus_tag="VFD73_01825"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase domain-containing protein"
                     /protein_id="HZI72769.1"
                     /translation="MATRPNFFIVGAPKCGTTALYEYLRPHPNVFMSPVKEPHFFATD
                     LGEYPFVRTWEEYTALFQESTDRHLAVGEASVYYLRSSVAIQKIHQFNPEARIIAMFR
                     NPVDMVYSLHSQLLYWSHEVETDFETAWRLQSRRRQGLDLPSRSKGAFLVQYEDVGRF
                     GTQVERLLSVFPPNQVKLILYDDFTRSPQRIYDETIEFLRIPHDGRSDFPRINENKRA
                     RVTWIRDLIRKPPPALRRVYRGVKEAVGGGGLDVLKSRMVDLNTVRERRPPLSPAFRS
                     ELVETFRDEVALLSRIMNRDLSHWT"
     gene            3912..4841
                     /locus_tag="VFD73_01830"
     CDS             3912..4841
                     /locus_tag="VFD73_01830"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HZI72770.1"
                     /translation="MKPVSRPIFIVGTGRCGSTAFQRVLSMHREVMWLSGVAYLFPRR
                     PVWNRRAVTAMGNPLLHRILGGVIRPGEQYRFWEEHAHGFSEPFRDLVASDVTPRVKK
                     QVRAAIAPMLTGKRSRLLAKITGWPRMGFLNEIFEDARFVHIIRDGRAVASSLLHVDF
                     WSGWAGPGGWRAGPLSAEDQAAWEASSRSFVTLAGLEWRIQMRAMDAARRALSPEQFL
                     EVKYEEFCEQPLETCRRVLDFAELPQSAWFDDRVRAASIRDMSGRWRGDLTPEQQVSL
                     DNLLREDLQRYGYQVSPPAREVRDLEGAGLRSR"
     gene            4838..>5974
                     /locus_tag="VFD73_01835"
     CDS             4838..>5974
                     /locus_tag="VFD73_01835"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HZI72771.1"
                     /translation="MSNHTVSPKEPKRAGSHGLTGRALAGLFWTFSGTGVQLVVQLLV
                     IMALGRLLTPAEFGLMGAAAVIIALSQIVSQVGVGPAIIQRQELDSLHIRVAFSLSGI
                     LGFLLGVIIWFAAPAIAAFYRIPAVEPVLRGMSLLFPIDGLNTVGESLLARRLRFRLY
                     AALDVGSYVFGYACIGVFLAWRGYGVWSLVAANLAQVTLRTISMYVATMHEVRPSLNL
                     QASRELLSFGFGISLAQIGRVFSQQGDNMVVGRWLGPSALGIYGRAYTLMVMPAQVFG
                     RIVNRVLFPVMAQVQDDPERLSRAYERALAVVALVALPISAFLLVVAPEFIPVLLGPA
                     WTGVIVPFRLFTFSLLFRMSSMISDTLTNATGVVYARALRQAFYA"
BASE COUNT         1015 a         1840 c         1882 g         1237 t
ORIGIN      
        1 ggcttctggt ggcctgggta ctggtgcgct accgatttcc gggacggcgt ctgatcgacg
       61 cgatcgtcga ccttcccttt gccttgccga ccgctgtggc gggcattgcc ctcaccactc
      121 tctatgccac gaatgggtgg atcgggagcg cactcgcccc ctgggggatc aaagtctcct
      181 acacctggct gggcatcacc gtggctctga tcttcatcgg cctgcctttc gtcgtgcgca
      241 cggttcagcc ggtgctcgac gacctcgaga tcgaagtgga ggaagcggcg gcaagtctcg
      301 gcgctcgacg ctggcagacc ttcagcagag tggttttccc cacgatcgcg ccggcgctcc
      361 tcaccggctt tgccctggcc ttcgcgcgcg ccatcgggga gtacggatcg gtggtcttca
      421 tctccggcaa catgccgatg aagacggaga tcgtgccgct tctcatcatc accaagctgg
      481 agcagtacga ttacgccggg gcgaccgcag tagccctggt gatgctcgtc gcctcctttc
      541 tgctcctgct gctcatcaat ctgatgcaat gggccgcgcg ccggcgggta aaggcctagc
      601 cgatggggac tctcgcgctt acccaggccg acgccggcgc gccccgagtc ctggccaccg
      661 gcgaggtgag atgggtgcgc tggagtttga tcggcatagc gctgctgttt ctggcgctct
      721 gtctcgttct cccgctcgtc ctggtcttcc accaggcctt gtccaaggga gtgtcggcct
      781 attggaatgc cattcgcgag cccgatgcgc tgagtgcggc caagctgacg cttctgatcg
      841 cctcgatcgc ggtgccgatc aacctgatct ttggcgttgc tgcctcatgg tgtatcgcca
      901 agttcagctt ccccggccgc agcctgctgg tcaccctgat cgacctgccc ttcgcggtgt
      961 cgccggtgat ctccgggatg atcttcgtcc tgctcctggg aacccacggt tggtttgggc
     1021 cgtggctcca agatcacgat atcaagatca tcttcgccgt tccgggcatc gtgctcgcca
     1081 cgaccttcgt gactgctcca ttcattgccc gggagctgat cccgttgatg gaggagcagg
     1141 gtgccgaaga ggaagaagct gccatcgtgc tcggtgctgg tgggtggcag accttcttcc
     1201 gggtaactct gccaaacatc aaatggggat tgctctacgg gctgattctc tgtaatgcac
     1261 gagcgatggg ggaattcggc gcggtgtctg tcgtctccgg ccacatccgg ggagagacca
     1321 acacccttcc actacatgta gaaatcctct acaacgagta cgcctttgcc tccagcttcg
     1381 cggtggcatc ggttctcacg ctgctggcgt tggttaccct tgctctgaag acgctggttg
     1441 aatggcagca acgacgggtg aaccacaccg gcgatcccga ggcggttctt gaaaggactg
     1501 cggcatgagc atcgaggtgc gaaacctccg caagaccttc ggcgatttcg ttgccctgga
     1561 taatgtcagc ctggaagtcc cgggtggtga actggtggcg ctcctggggc cctccggctc
     1621 gggcaagacg acattgctca ggatcattgc cgggctggag ccggctgacc aaggcagcat
     1681 ccatttccat ggagaagagg ccaccgatca gccggtgcgg gagcggcagg tcggattcgt
     1741 gtttcagcac tatgcgctgt tccgtcacat gagcgtcttc gagaacgtcg ccttcgggct
     1801 gcgggtgcgt ccgcgcaggc tccgcccttc cgaagccagc attcgggaga cggtcatggg
     1861 cctgctcagc ctggtgcagc tggacgtgct ggcagaccgg cgcccatccg agctctccgg
     1921 gggccaacgt cagcgggtgg cgttggcgcg ggcgctcgcc gtcaagccca aagtgctgct
     1981 gctcgacgag ccgttcgggg cgctcgatgc caaggtaagg aaagagctgc ggcgctggct
     2041 ccgtcggctg cacgaggaag tgcacgtgac cagcgtgttc gtgactcacg atcaagaaga
     2101 agcgctggag gtctccgatc gtgtggtgat catgaacgcg ggccgggtcg agcagagcgg
     2161 cacgccggag gaagtctacg agcgaccggc gactccgttc gtgtacgggt tcttgggaga
     2221 cgtcaatctg ttccacggcc gaattcacca gggccgggtc gacatcgggc agggggagct
     2281 gcttgcgccg gagtgggccg gcgccaagga ccaggcaggc atagcgtacg tcagaacgta
     2341 tgaagtcgag ctggatccgg caccgacgag tggggcctca ctgcccgcct tcgtgcgcca
     2401 catccgcgcc tttggcccgg tcgtgcgtct ggagctcgac ctggtggacg gcggaaagac
     2461 gatcgaagct caccttccgc gcggccgatt caactcgctc gctcttacga aagggcagcg
     2521 ggtgtatgta tcaccgacca atgtccgggt atttgccgag agcggctgac ctgaattgaa
     2581 ctcctcaggt ccagtgactg aggtcccggt tcatgatccg ggacagcaac gccacttcat
     2641 ctcggaacgt ctccaccagc tcggaccgaa aagccgggct gaggggagga cggcgctccc
     2701 ggaccgtgtt caggtcaacc atcctgctct tcaagacatc cagtccgcca ccgccaacgg
     2761 cttcctttac tccgcgatac acccgtcgca aggccggcgg aggtttgcgg atgagatctc
     2821 ggatccaggt gacccgcgcc cgcttgtttt cgttgatccg gggaaagtcg gagcgaccgt
     2881 cgtgcgggat ccgcagaaac tcgatcgtct catcatagat gcgttggggt gatcgagtaa
     2941 aatcatcgta gaggatgagc tttacctgat tcgggggaaa gaccgacagg agccgctcca
     3001 cttgggtccc gaagcgaccc acgtcctcgt actgcaccag gaatgctccc ttcgaccgtg
     3061 atggcagatc gaggccctga cgtcgccgac tctggagccg ccacgcggtc tcgaagtcgg
     3121 tctctacttc atgtgaccag tagagcagct gagagtggag tgaatacacc atgtccaccg
     3181 gatttcggaa catcgcaatg atccgggcct ccggattgaa ctggtgaatc ttctgaatgg
     3241 ccacggacga gcggaggtaa tagaccgagg cttcccctac cgcgagatgc cgatcggtgc
     3301 tctcctggaa caatgccgtg tactcttccc atgtcctgac gaatggatac tcgcccaggt
     3361 ccgtcgcgaa gaaatgaggc tctttgaccg gtgacatgaa tacgttcgga tgcggtcgca
     3421 gatactcgta caaggcggtg gtcccgcact ttggggcacc tacgatgaaa aagttcggtc
     3481 gagtggccac tcagatctcc caagaacgga ccgggcacaa accccacggc ttcggtgacg
     3541 gattataaac gaccctacgc ttccttcctt cgtgatctca gccacggcgc gccgggaacc
     3601 aggaagggcc cgcgccactg ctgtggcaaa cccgcgacat gatggttccc cttgccaggt
     3661 cgcggggtga ccgtttctga gggtcggctg caattggacg caggtttcgc gctggccggc
     3721 catctaagtg gcagatactc cattaccccg cccaccggtt atcatctttg acggtaaatg
     3781 tggggcatgg atcgtgctca tcccccggtt ccggcccaac cgaccagcag cccccggcgc
     3841 tgccccaggc tcgggatcgg cccctcatgc ccacagtcgc gggagcagct ccgacgagga
     3901 tgccgtcagc aatgaagcca gtcagcagac caattttcat cgtggggacc ggccgctgcg
     3961 gctcgaccgc attccagcga gtgctgtcga tgcatcggga ggtcatgtgg ctgtccgggg
     4021 tggcgtacct gttcccccga aggccggtct ggaatcgccg ggcggtcacg gccatgggaa
     4081 atcctctgct gcaccgcatc ctgggcggag tgatcaggcc gggcgagcag tatcgatttt
     4141 gggaggagca cgcccatggc ttctccgagc cgtttcgaga tctggttgcg agtgacgtga
     4201 cccctcgggt caaaaagcag gtccgtgcgg ccattgctcc catgctcact ggcaagcgca
     4261 gtcggctact cgcgaagatc accggctggc cccgcatggg atttctcaac gaaatcttcg
     4321 aagatgccag gttcgttcac atcattcgtg acggccgggc agtcgccagc tcactgctgc
     4381 acgtggattt ctggagcggc tgggcggggc ccggcggctg gcgggccggg ccgctctcgg
     4441 cagaggacca ggccgcctgg gaggcttctt cgagatcgtt cgtcacgctc gccggcctcg
     4501 agtggcgtat tcagatgcgt gcaatggacg cagctcgccg ggcgctttct ccagaacagt
     4561 tcctggaagt gaagtacgag gaattctgcg agcagccgtt ggagacctgc cgcagagtgc
     4621 tggattttgc cgagcttcct cagtcggcct ggtttgacga tcgggtacgc gcggcgtcga
     4681 ttcgagacat gagtggccgc tggcgcggtg acctcacccc tgaacagcag gtcagcctgg
     4741 acaatcttct gcgcgaggac ctgcagcgat acggctacca ggtgtcgcca cccgctcgcg
     4801 aggtgcgaga tctcgaaggg gcgggacttc ggtcgcggtg agcaaccata ccgtttcccc
     4861 caaagaaccg aagcgcgctg gatctcatgg tctgaccggt agagcgctgg ccggactgtt
     4921 ctggaccttc tccggaaccg gcgtccagct ggtggttcag ctgctggtca ttatggcgct
     4981 gggccggctc ctcaccccgg ccgagttcgg gttgatggga gcagcggccg tgatcatcgc
     5041 gctctcccaa atcgtctccc aggttggcgt cggtcccgcg atcatccagc gccaagagct
     5101 ggactccctc catatccggg tcgccttcag cctttcagga atcctgggtt tcctgttagg
     5161 cgtgatcata tggttcgccg ctcctgcaat cgccgctttc taccgcattc ccgcagtgga
     5221 accggtactc cggggaatgt cgctgctatt tccgatcgat ggcctgaaca ccgtcggcga
     5281 gtcgctgctc gcccggcggc tccgctttcg actgtatgcc gcgctggatg tcggcagcta
     5341 tgtctttgga tatgcctgca tcggtgtctt tctggcgtgg cgaggttatg gagtatggtc
     5401 gctggttgcc gccaacctgg cgcaggttac gctgcggacc atcagcatgt acgtcgccac
     5461 catgcacgag gtccggccca gcctcaacct ccaggccagc cgagagctcc tgagctttgg
     5521 attcggtatc tcgttggccc agattggccg ggtcttttcc cagcaaggcg acaatatggt
     5581 tgtcggacgc tggctcggcc cctcggccct gggcatctac ggccgagcgt acactctcat
     5641 ggtgatgcct gcgcaggtgt ttggccggat cgtcaatcgg gttctcttcc cggtaatggc
     5701 ccaagtgcag gacgatccag aacgactgtc gcgagcgtac gagcgcgcgc ttgcggtggt
     5761 cgcactggtc gccctcccca tcagcgcctt tctgctggtc gtggcgccgg agttcattcc
     5821 ggtgctcctg ggtccggcct ggaccggtgt gatcgtaccg ttccgtctct tcaccttcag
     5881 tctgctgttc cgcatgagca gtatgatcag tgacacgctc acgaatgcga cgggtgtggt
     5941 gtacgcgcgc gctctccgac aggcattcta tgcc
//
LOCUS       DASRPQ010000156         1074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3780968, whole genome shotgun sequence.
ACCESSION   DASRPQ010000156 DASRPQ010000000
VERSION     DASRPQ010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3780968"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(260..460)
                     /locus_tag="VFD73_01840"
     CDS             complement(260..460)
                     /locus_tag="VFD73_01840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72772.1"
                     /translation="MKILMAAETKSPALCIIKRIPGLDEFDSEPPDRSDLSLYRGRRS
                     HYCGPAAEARCGIGNTQRMVSC"
     gene            564..>1074
                     /locus_tag="VFD73_01845"
     CDS             564..>1074
                     /locus_tag="VFD73_01845"
                     /inference="COORDINATES: protein motif:HMM:NF040570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI72773.1"
                     /translation="MGKVVKRAYRYRFYPSPEQAAELSRTFGCVRKVYNLALEARTAA
                     WYQRQERVSYVQSSALLTEWKRDPGMKWLNEVSSVPLQQALRHLQGAFAAFWDKRAQY
                     PKFKSRKKSRASAEYTRSAFRYRDGRLTLAKMAEPLDIRWSRPLPEGAEPSTVTVSRD
                     AAGRWFVSLL"
BASE COUNT          181 a          351 c          349 g          193 t
ORIGIN      
        1 tggtacgtag agttatgcct gatatgggat atccgtgatg agccctccgc gttccgtcag
       61 gccgcccacg cttgacgagg ttcatcatgc tgcccggttc atcgcccgca tcctgcctcc
      121 gacgccgctt gccgcaccgg tagatgcgac ctcgcccgta cttaaactcg aaggcctgca
      181 accgactggc tcattcaagg tccgcggagc gcttgccgcg ctggaatccc tggcgccaga
      241 tcgagccgtc gtaactgcct cagcaggaaa ccatgcgctg ggtattgcct atgccgcaac
      301 gcgcctccgc cgccgggcca cagtagtgac ttcgacgacc gcggtagagg ctaagatcac
      361 tgcgatccgg cggttcgctg tcgaactcat ccaggccggg aattcgtttg atgatgcaga
      421 gagccgggct cttcgtctcg gcggccatga ggattttcat caattaggcg aggcgcggat
      481 accccggcgt tcacgccggg gaggagcgcc cctacctccc ttccaggtgt atggctcaca
      541 caacgagccg gtagaatgtg agcatgggca aggtggtgaa gcgggcgtac aggtaccgct
      601 tctacccgtc gccggagcag gcagcggaac tgtcccgcac gttcggctgt gtccggaagg
      661 tctacaacct ggcccttgag gcgcgcactg cggcctggta ccagcgccag gagcgcgtgt
      721 cctacgtaca gtcctccgcc ctgctgacgg agtggaagcg cgacccgggc atgaagtggc
      781 tgaacgaggt ctcgtccgtc ccgctccagc aggccctgcg gcatctccag ggcgcgttcg
      841 ccgcgttctg ggacaagcgg gcgcagtacc cgaaattcaa gtcccggaag aagtcgcggg
      901 cgtcggccga gtacaccagg tcggcgttcc gctaccggga cgggcggctc accctggcga
      961 agatggcaga gccgctggac atccgctggt cccggcccct tccggagggc gcggagccgt
     1021 ccacggtcac cgtgagccgg gacgcggcag ggcgctggtt cgtttccctg ctgt
//
LOCUS       DASRPQ010000157         1912 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_955335, whole genome shotgun sequence.
ACCESSION   DASRPQ010000157 DASRPQ010000000
VERSION     DASRPQ010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1912)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1912)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1912
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_955335"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            87..944
                     /locus_tag="VFD73_01850"
     CDS             87..944
                     /locus_tag="VFD73_01850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72774.1"
                     /translation="MAAIVSPGPQGVIAALTAISLAVSAARSSREHTLLGTAQEIGAG
                     TVQSFVKVAANGAPVALGVTLSRGALEQLPRIPNTTSRCFDMDGNGRYNGHECMGDEE
                     RILDVPTGASSLPFSWVMLNWNPAGHHGTPYAQGHFDFHFYMTDRNLVESIRPGRCGE
                     MVDCGDFKRGSERVPPRYLPAGYIDIGAVAPRMGNHLLDSRSPELKDSLPFTSTFIYG
                     AYQGDIIFLEPMITLDVLRSPENRCLEIRQPQAFRRAGYYPTQYCVRQERNGQRTVSL
                     EGFRYAEAQ"
     gene            1002..>1912
                     /locus_tag="VFD73_01855"
     CDS             1002..>1912
                     /locus_tag="VFD73_01855"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA/HSCARG family protein"
                     /protein_id="HZI72775.1"
                     /translation="MPDRKIIAVIGATGAQGGGLVRAIQADRSGSFAARAITRNPNSE
                     KAQALKASGVEVVTADADDPASLERAFAGAYGAFCVTNFWEHFSPERELAQARNQAQA
                     AKQAGLQHVIWSTLEDTRKWIPLEDTRMPTLMGKYKVPHFDAKGEADGIFKELGVPTT
                     WLLTSYYWDNLIYFGAGPQRSPDGVLAVTFPMDDKKLPGIAVEDIGKCALGVFKRGKE
                     FINKTVGIAGEHLTGQQIATALTEALGQEVRYNNVSPEVYRSFGFPATDDLGNMFQFK
                     RDFNDYFCGARNLEFSRSLNPELQTFR"
BASE COUNT          374 a          571 c          605 g          362 t
ORIGIN      
        1 gaggtgcggg ccggcatccg accgtatccc tgatttttgt tggacggtac ttgttataac
       61 ggataacctt acacaaggag aataccatgg cggctatcgt ctctccggga ccgcaggggg
      121 tcatcgcggc gctgaccgcc atcagcctgg ccgtgtcggc agcgagatca tcacgcgagc
      181 acacgctcct gggaacggca caggaaatcg gggccggcac ggtgcagagc ttcgtgaagg
      241 ttgcggccaa tggcgctccc gtggctctgg gcgtgacgct ctcccggggc gcgctggagc
      301 agcttccccg gataccgaac acgaccagcc gctgtttcga catggacggc aatggccggt
      361 acaatggtca cgagtgcatg ggagacgagg agcggattct ggatgttccc actggtgcat
      421 cctcgctccc gttcagctgg gtcatgctga actggaatcc tgccggccat catggcacgc
      481 cctacgctca gggccacttc gattttcact tctacatgac tgatcggaat ctggtggaat
      541 cgattcgtcc cggccgctgc ggcgaaatgg tagactgtgg cgacttcaag cggggttcag
      601 agcgggtgcc gccgcgatac ctcccggcag gttatatcga tattggtgca gtggcgccga
      661 ggatgggcaa tcatttgttg gattcgcggt cgccggagct caaagattcg cttccgttca
      721 ccagcacctt catctatggc gcctatcagg gcgacatcat tttcctggag ccgatgatca
      781 cgcttgacgt tcttcgcagc ccggaaaacc gctgcctgga gatacgccag cctcaagcgt
      841 ttcgcagagc aggctattat cccacgcagt actgcgtgag acaggagcgg aacggccagc
      901 gcacggtgtc gctggagggc ttccgctacg ctgaggcgca gtagccgggt catcgacagg
      961 accgttgagc gttcattctc acaccgcgag ggagatgcac catgccggac cggaagatca
     1021 ttgccgtgat tggagcgacg ggcgcgcagg gcggaggatt ggtgcgggcc attcaggctg
     1081 accgaagcgg ctccttcgcc gcgcgggcca tcacgcgaaa cccgaactcc gaaaaagctc
     1141 aagcactcaa agcgagtggc gtggaggtcg tgacggcgga cgccgatgac cccgcgagtt
     1201 tggagcgagc gtttgccgga gcgtacggcg cgttctgtgt taccaacttc tgggagcact
     1261 tctcgcctga gcgggaactg gcccaggctc gcaatcaggc gcaggcagcc aagcaggccg
     1321 ggctgcagca tgtgatctgg tccaccctcg aggatacccg gaaatggatt ccgctcgagg
     1381 acacccgtat gcccacgctc atgggcaaat acaaggttcc gcatttcgac gccaaggggg
     1441 aggccgatgg catcttcaag gagctgggtg tgccaaccac ctggctcctc acctcctact
     1501 attgggacaa cctgatctac ttcggggccg gtcctcagcg tagccctgat ggtgtcctcg
     1561 cggtcacctt ccccatggat gacaagaagc ttcccggcat cgcggtcgag gacatcggca
     1621 agtgcgccct gggggtcttc aagcggggga aggaattcat caacaagacg gtgggcattg
     1681 ccggcgagca cctgaccggc caacagatcg ccacggcgct taccgaggcg ttggggcagg
     1741 aggtgcgcta caacaacgtg tcgcccgagg tgtaccggag cttcggcttt ccagccacgg
     1801 acgatctggg caacatgttc cagttcaagc gcgacttcaa cgattacttc tgcggggccc
     1861 ggaacctcga gttcagtcgc tcactcaacc ccgagctgca gaccttccgg ga
//
LOCUS       DASRPQ010000158         1059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_329302, whole genome shotgun sequence.
ACCESSION   DASRPQ010000158 DASRPQ010000000
VERSION     DASRPQ010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_329302"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..322)
                     /locus_tag="VFD73_01860"
     CDS             complement(<1..322)
                     /locus_tag="VFD73_01860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI72776.1"
                     /translation="MIEVEGLEKQYGDFPAVRGLSFSVQPGEVLGLVGPNGAGKTTTI
                     RSIAGIIIPTRGTIRIGGHDLASQPVAAKSMLAFIPDEPHLFEYLTVEEHLRFVGRLY
                     QVADV"
     gene            456..>1059
                     /locus_tag="VFD73_01865"
     CDS             456..>1059
                     /locus_tag="VFD73_01865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72777.1"
                     /translation="MRSYWGRILLGAFGIFCLGMIVVSIFRHGRSKVESVIASSEPLS
                     IPLPFVPFQVNGSKLGQLERLTVNRETPKKVSSIELQVKMDDSLVAKGLAGCRLAANI
                     ESDSAKRRGDVNIHMNRLDEKTFFFCVTQDSGYEEMGTATLTPGDIELPLLLPESLAQ
                     HLRNGDWADGADSSDAIGARADSIAEAAQATADSAQAKAEQ"
BASE COUNT          197 a          337 c          345 g          180 t
ORIGIN      
        1 cgacgtcggc cacctggtac agccgaccga cgaagcggag atgttcctcc accgtcaggt
       61 actcgaacag atggggctcg tccgggatga acgcgagcat cgatttcgcg gcgaccggct
      121 gggacgccag atcgtggccc ccgatccgga tggtgccgcg ggtagggatg atgatgccgg
      181 cgatgctccg gatcgtcgtg gtcttgccgg cgccattggg ccccaccagc cccagcactt
      241 cgccaggctg cacgctgaag ctgagccccc gtacggcggg aaagtcgcca tactgcttct
      301 cgagtccctc gacctcgatc acggccgctc ccgccggcgg ccctgtcgaa aggcgccggg
      361 caggtgaaac tttcgacggt cggccaacgt ctctagttgg aacattttac ccctgagcgg
      421 gtgtggaccc ctgcgagcgg cccggaggcc gaaccatgcg aagctattgg ggacggatcc
      481 tgttgggcgc cttcggcatc ttctgcctcg ggatgatcgt ggtctcgatc ttccggcacg
      541 gcaggtccaa ggttgaatcg gtcattgcca gctcggagcc cctgagcatt ccgctgccct
      601 tcgttccttt ccaggtcaac ggcagcaagc tcggccagct cgagcgattg acggtgaacc
      661 gagaaacccc caagaaggtg tcctcgatcg agcttcaggt gaagatggac gattcgctgg
      721 tggccaaggg actggccgga tgccggttgg ccgccaatat cgagagcgac tcggccaaga
      781 ggcgcggtga tgtgaacatt cacatgaacc ggctggatga gaagacgttc ttcttctgcg
      841 tgacgcagga ctcggggtac gaggagatgg gaaccgccac gctgaccccg ggcgacatcg
      901 agctcccgct gctgctgccg gaatcgctgg cccagcacct caggaacggc gattgggccg
      961 atggcgccga ctcctccgac gcaatcggag cccgggccga ctccattgcg gaagcagccc
     1021 aagccacagc ggactcagcg caagccaagg ccgaacagg
//
LOCUS       DASRPQ010000159         1685 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3463671, whole genome shotgun sequence.
ACCESSION   DASRPQ010000159 DASRPQ010000000
VERSION     DASRPQ010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1685
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3463671"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1072)
                     /locus_tag="VFD73_01870"
     CDS             complement(<1..1072)
                     /locus_tag="VFD73_01870"
                     /inference="COORDINATES: protein motif:HMM:NF044997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72778.1"
                     /translation="MSDAGTDRDGGSRATSCGQPLSRRTMLRAGAGVLGVLTLDAGAL
                     MALPGGSALAVGPSPNVGSASSSDDVVIQWNNAALQAVRDVNPGPTVASRALAIMHTA
                     MYDAWAAFDSVAVPTRPNGIPRHSGSANGLGNKNKAVSYAAYRAMLDLFPSDAAVFKA
                     LMSSLGYDPNDTSADTRSPTGIGNVAAQAVLSFRHGDGSNQLNGYADTSHYQPVNTPN
                     QIIDPLRWQPLRVNGKVQNYTTPHWGTVTPFALSSGSQFRPAGGPIMDTGSSAYQAQV
                     DTILNYSANLSDTTKTIADYWANGPHSETPPGHWMLISQFTSAQSVARRNKNDANNDV
                     KLFFALSNALLDAGIACWDTKRA"
     gene            1204..1590
                     /locus_tag="VFD73_01875"
     CDS             1204..1590
                     /locus_tag="VFD73_01875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72779.1"
                     /translation="MIADMMDARSQTTHYAALVARIATWLRGKTPGLPYRIISATTIP
                     LFRAMPSTVPAANPMACGWAKEPGADERFGAWRSSMAWGGQHHANLIHIAAGLFTYVR
                     TARFVRVSALMPLLGPETPTVPNLYR"
BASE COUNT          285 a          518 c          559 g          323 t
ORIGIN      
        1 acgcccgctt cgtgtcccag caggcgatgc ccgcatcgag gagcgcgtta ctcagcgcga
       61 agaacagctt cacgtcgttg ttggcatcgt tcttgttccg gcgggcaacg gactgcgccg
      121 aggtgaactg ggagatgagc atccagtgac cgggaggggt ctcgctgtgg gggccgttgg
      181 cccagtagtc ggcgatcgtc ttggtcgtgt cgctcaggtt cgcgctgtaa ttgaggatgg
      241 tgtcgacctg ggcctggtag gcggaactac cggtgtccat gatgggtccg ccggcgggcc
      301 ggaactggga gccagagctc agcgcgaacg gcgtgaccgt cccccaatgc ggggtcgtgt
      361 aattctggac cttgccgttc acccgcagag gctgccagcg cagcgggtcg atgatctggt
      421 tgggcgtatt gaccggctgg tagtggctgg tgtccgcata gccgttgagc tgattcgacc
      481 cgtcgccatg gcggaaggag agcaccgcct gagccgccac gttgccgatc ccggtcggtg
      541 aacgggtgtc ggccgacgtg tcgttggggt cgtatcccag cgaggacatc agcgccttga
      601 agacagccgc gtcactgggg aacaggtcca gcatggcgcg gtaggccgcg tagctgacgg
      661 ccttgttctt gttgcccagc ccgttggccg acccggagtg gcggggaatg ccgttgggac
      721 gggtcggaac cgccacggaa tcgaaggcgg cccacgcgtc atacatggcc gtgtgcatga
      781 tggccagcgc gcgcgaggca accgtgggcc cgggattgac atcccggacg gcttggaggg
      841 ccgcgttatt ccactggatc acgacgtcgt ccgagctcga ggcggatccc acgttcgggg
      901 agggccccac ggccaaggca gatccgcccg gaagtgccat cagcgctccg gcgtcaagcg
      961 tcagcacgcc cagaacccca gccccggcac gcagcatcgt gcgcctgctc aaaggctggc
     1021 cgcaggaggt tgcccggctg ccgccgtcgc ggtccgtccc ggcgtcagac atgccgtccg
     1081 gcctcatctg gctgcccccg ggtcaggatc cggcgggatt caggccctgg ataaatggca
     1141 tgctgccggg caaaatgcgt gatcatcccg caaatcctcc ttttcggggt ttcttgacga
     1201 aggatgatag cggacatgat ggacgctcgc tcccaaacca cgcattacgc agcgctggtg
     1261 gcccgcatcg caacttggct tcgaggcaaa acgccgggcc taccataccg gatcatttcg
     1321 gccacaacta ttccattgtt ccgtgcgatg ccctcgacgg tgccggccgc gaacccgatg
     1381 gcatgcggat gggctaagga gcccggcgcg gatgagcgct tcggcgcctg gcgcagctcc
     1441 atggcctggg gcggccagca ccacgccaac ctcatccata tagcggcagg gctctttacc
     1501 tatgttcgga cagcccggtt cgtccgggtg tctgccttga tgccccttct ggggccggaa
     1561 accccgactg tcccgaattt atatcgctga aatcacttca atatatattt tgagtagaat
     1621 cgtgctattt tggttgaaat ccccggtcag cgtctgcttt gctatctgac tgagaccgaa
     1681 ggtcc
//
LOCUS       DASRPQ010000160         1084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3159297, whole genome shotgun sequence.
ACCESSION   DASRPQ010000160 DASRPQ010000000
VERSION     DASRPQ010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3159297"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..702)
                     /locus_tag="VFD73_01880"
     CDS             complement(<1..702)
                     /locus_tag="VFD73_01880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI72780.1"
                     /translation="MAQNFIFTMQDLRKVKGGKDILKGIYLSFFPGAKIGVIGPNGAG
                     KSTLLRIMAGVDKEFFGVAKPDPGARVGFLPQEPQLDASLDVKGNVELGLKPVRDLLN
                     RFNEVSAKFAEPMDDAAMEKLLAEQGRLQDAIDACNGWELDRTLEMAMDALRLPPGDA
                     DVTKLSGGEKRRVALCRILLEKPDLLLLDEPTNHLDAESVAWLEQALKEYKGTVVCIT
                     HDRYFLDNAAEWILEL"
     gene            857..>1084
                     /locus_tag="VFD73_01885"
     CDS             857..>1084
                     /locus_tag="VFD73_01885"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI72781.1"
                     /translation="MSSPPALELRGLSKTYGGNRLTALSDVTLNIRPGEIFALLGPNG
                     AGKTTLIGSVCGLVKKTSGKVLVFGQDLDEDP"
BASE COUNT          174 a          400 c          321 g          189 t
ORIGIN      
        1 cagctccaga atccactccg ccgcgttgtc caggaagtag cggtcgtgcg tgatgcacac
       61 caccgtcccc ttgtactcct tgagcgcctg ctccagccac gccacgctct ccgcgtccag
      121 gtggttggtg ggctcgtcca agagcagcag gtccggcttc tccagcagaa tccggcacag
      181 cgccacacgg cgcttctccc cgcccgacag cttcgtcacg tccgcgtccc ccggcggcag
      241 ccgcagcgcg tccatcgcca tctccagcgt ccggtccagc tcccagccgt tgcacgcgtc
      301 gatggcgtcc tgcagccgcc cctgctccgc cagcagcttc tccatcgccg cgtcgtccat
      361 cggctcggcg aacttcgcgc tcacctcgtt gaagcggttg agcaagtccc gcaccggctt
      421 gagccccagc tccacgttcc ccttcacgtc cagcgaggcg tcaagctgcg gctcctgcgg
      481 caggaagccc acccgcgcgc ctgggtccgg cttggccaca ccgaagaact ccttgtccac
      541 cccggccatg atgcgcagca gcgtggactt gccagcccca ttggggccga tgacgccgat
      601 cttcgcgccc gggaagaagg acaggtagat gcccttgagg atgtccttgc ctcccttgac
      661 cttgcgcaag tcctgcatgg tgaagatgaa gttctgggcc atcgtgctct ctcgctctct
      721 tgaggctggg tgacgggacg ctggcggata ctaaggagcc acggcgggcg caagacgcac
      781 ggacggtgcg atggcgtcca gcgggcatca aaacgctgcc aggacgctcg gccagggtgc
      841 taaagcccct gccatcatgt cctcgcctcc cgcgctcgaa ctccgaggtc tctccaagac
      901 ctatggcggc aacaggctca ccgccctgtc cgatgtcacc ctcaacatcc ggcccgggga
      961 gatcttcgcc ctcctcggcc ccaatggtgc cggcaagacg acgctcatcg gctcggtctg
     1021 cggcctggtg aagaagacga gcggcaaggt gctcgtcttc gggcaggacc tggacgagga
     1081 tccg
//
LOCUS       DASRPQ010000161         1129 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2532534, whole genome shotgun sequence.
ACCESSION   DASRPQ010000161 DASRPQ010000000
VERSION     DASRPQ010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2532534"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..244)
                     /locus_tag="VFD73_01890"
     CDS             complement(<1..244)
                     /locus_tag="VFD73_01890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI72782.1"
                     /translation="MTRRIHLQPHLSVAELERRYRAAKEPHERSWWRSGQILWLLGRG
                     QLAKDIAESTGYSRYWIGQLVRRYNTQGPAGMHNRQH"
     gene            complement(458..967)
                     /locus_tag="VFD73_01895"
     CDS             complement(458..967)
                     /locus_tag="VFD73_01895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72783.1"
                     /translation="MSEHHEVSGADLVLVVTGNIGGLSVTSTVQLSPPTGNRLVVHVS
                     TSVAGTVVLDSRPGEAFKPVMVASMHESTSIWDARSAYVGSSTVVFPGSGWITQPPVD
                     ATSFGLRGGTSSWKVNAPTIGIGLDRSMPVTGWVTASNDPNADNVGFWCATDTVLASW
                     SYTITASAT"
BASE COUNT          224 a          374 c          327 g          204 t
ORIGIN      
        1 tgtgctggcg attgtgcatg ccggctgggc cttgcgtgtt gtagcgccgg accaactgcc
       61 cgatccaata gcgcgagtag cccgtgctct cggcgatatc cttggcgagc tggccccgcc
      121 ccaacagcca caggatctgc ccagatcgcc accaactgcg ttcgtgcggc tccttggccg
      181 cgcggtagcg tcgctccagc tccgcgacgc tcaagtgcgg ttggaggtga atgcgtctgg
      241 tcatgccgct attctaccgc cacccatgcc cattccgtat cacagttcgg ggcgatgtcc
      301 gcaggccaca gggccgtctc aggtggcccg cccaccaacc gagatgtacc ctccggcggc
      361 ataatgtctg tgaccagcaa ggccagcctt gcgtctggta ttgatcgccc cacggcctct
      421 cggtgcccca tccagccaca atcggtatag cgcaaggtca tgttgcggaa gctgtgatgg
      481 tgtagctcca agaggccagt accgtgtcgg tggcacacca gaacccaacg ttgtcagcat
      541 tgggatcatt gctcgctgtc acccagccgg tcaccggcat tgaccgatcc agcccaatgc
      601 cgatggtggg agcgttgacc ttccacgacg aggtgccgcc acggagcccg aaggacgttg
      661 catccacggg cggctgggtg atccagccgc tgcccggaaa cacaacggtc gagctgccca
      721 cataggccga tcgcgcatcc cagatgctcg tcgactcatg catgcttgcg accatgacgg
      781 gcttgaaggc ctcgcctggc cgcgaatcca gcactactgt acctgccacg ctggtcgaga
      841 catggacgac gagacggttg cctgtcggtg gagaaagctg cacggtggaa gtcacagaaa
      901 gtccgccgat atttcctgtc actacgagca ccagatccgc cccggacacc tcgtggtgct
      961 cgctcacggg cgcaccttga caatacccac ctgggcatgc cgctgcgctc cagaatgcag
     1021 gcaggagaat aaccgatgat ccccaaccag aagcgggacc atagttcacg cgaaagtacc
     1081 cactcgacaa atgcagagcg gcatactcag gatatgaacc ctcgctgcc
//
LOCUS       DASRPQ010000162         1245 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2836876, whole genome shotgun sequence.
ACCESSION   DASRPQ010000162 DASRPQ010000000
VERSION     DASRPQ010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2836876"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(9..539)
                     /gene="gmk"
                     /locus_tag="VFD73_01900"
     CDS             complement(9..539)
                     /gene="gmk"
                     /locus_tag="VFD73_01900"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: protein motif:HMM:NF012832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HZI72784.1"
                     /translation="MLSGPSGVGKSTVVAGLRAQCPDIWLSVSVTTRAPRPGEVNGRE
                     YHFVTDAAFDAMVARGELLEWATFDGKKYGTPKAPVAEQAVAGVATLLEIDIEGARQV
                     RRSVPGALLVFLAPPSRAELARRLTGRGTEPPDVIARRLEVARQEIEAGREFDITLVN
                     TSVKDVCRQLVTLMTA"
     gene            complement(659..979)
                     /gene="mihF"
                     /locus_tag="VFD73_01905"
     CDS             complement(659..979)
                     /gene="mihF"
                     /locus_tag="VFD73_01905"
                     /inference="COORDINATES: protein motif:HMM:NF041260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor, actinobacterial type"
                     /protein_id="HZI72785.1"
                     /translation="MALPPLTPAQRAAALEKAAKARKDRAEVKNNLKRGAITLPAVLK
                     QGQSDEIVGKMKVSALLEAMPGVGKVRARQIMERLGIAESRRVRGLGANQRTALENEF
                     GGEL"
BASE COUNT          222 a          419 c          381 g          223 t
ORIGIN      
        1 ggcacgctct aagccgtcat caaggttacc agttgcctgc acacgtcctt gacggatgtg
       61 ttcaccagcg tgatatcgaa ctcccggccg gcttcgatct cctgcctcgc cacttccaag
      121 cggcgggcga tcacgtcggg cggctcggtg ccgcggccgg tgagcctgcg ggccagttcc
      181 gcacgggacg ggggggccag gaagaccagc agggcgcccg gcacgctgcg gcgcacctgc
      241 cttgcgccct cgatgtcgat ctccagaaga gtcgccaccc ccgcgacggc ctgctccgca
      301 acgggagcct tcggggtgcc gtacttcttg ccgtcaaacg tggcccactc aagcaactcg
      361 ccgcgggcca ccatggcatc gaatgccgca tcggtcacga aatggtattc acgaccgttg
      421 acttcgcccg gccgtggcgc gcgggtagtc acggaaaccg acagccagat gtccgggcac
      481 tgcgcccgca agcccgccac gaccgtgctc ttgccaacac cggaagggcc ggaaagcacc
      541 gtcagccggg cttcatggct gcccccccgg acaagcgcgg catcgcttac gcgatgtaac
      601 ggcgaatcag ccgcggatct gtgttccccg cgctcgtcct tggggtcgtt agggtcggtc
      661 agagctcacc accgaactcg ttctcaaggg cggtgcgctg attggcaccc aggccgcgaa
      721 cccggcgcga ttccgcgatg ccgagccgct ccatgatctg ccgcgcccgt accttgccaa
      781 cccctggcat ggcctcaaga agcgccgaga ccttcatctt gcccactatc tcgtcagact
      841 gcccctgctt gaggacagcc gggagcgtga tggcaccacg cttcaggttg ttcttgacct
      901 cggcacgatc cttacgtgcc ttagccgcct tctccagggc agctgcgcgc tgagcgggag
      961 tgaggggagg aagagccact ccgtgtcacc tcgggtttct aatagaaaac attggttcgg
     1021 gatgggaaag tagcgagttc ggctctccag ggcaacgcga atgcccgttt aacacggtat
     1081 aaattaacta ctactactcc atgaaaccgg ccggttgctc agggtagtta actggagtgg
     1141 ttgcccgatg ctcaagggcg gcgcccggcc ctgcgctgac ccctgaaccg gaggccgacg
     1201 agacaggtcg ggcctgctga cggccagctt tctaccgatc gtata
//
LOCUS       DASRPQ010000163         2630 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4404328, whole genome shotgun sequence.
ACCESSION   DASRPQ010000163 DASRPQ010000000
VERSION     DASRPQ010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2630
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4404328"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2068
                     /locus_tag="VFD73_01910"
     CDS             <1..2068
                     /locus_tag="VFD73_01910"
                     /inference="COORDINATES: protein motif:HMM:NF040057.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="putative LPS assembly protein LptD"
                     /protein_id="HZI72786.1"
                     /translation="ILWLPFIFQDTRPGRHSGILIPQFGLNDLVRPTRTYNRQISNIG
                     YYWAPSDYFDLTGRLDWFANRYVQYGVAGQYRWLNRFMSGSVGVNEQDEVGGGSGFNL
                     RWDHSQQFSLSSSLTFNINYASNTAVVNRNAIDPFQNTQQITSSLNYSKRLSWGTLTL
                     GGNRRQSLSDGSVQQLLPAVTLSPVPIALGSDITWSPGLSFTNNTTKNPSADTLLRAL
                     PGGLFDTVTTNATSRVTALNFDTPVRFGGFNWQNSIQLNDQHSAGQEVVTFRTPDLST
                     PDPSDSIEVQRTFLSDFQSSFDWDTGINLPVLFRGSWKIQPGIGVGNTTAGPFAIRNR
                     NTNGDWVTQGKRFRFGATASPTLFGFFPGIGPLARIRHSLSPVITWNYQPAATVNEAF
                     ARATTVPGQPVELRSDAQQQVSVALSQTFEGKYKATGTDTSATEESRKIRLLSINTSG
                     ITYDFEKAKKPGFTGWATQTVTNSILSDLLPGFTLSFSHDLWRGVVGADSSKFSPFLQ
                     SMSASFQVSGNTFRSIASIFGLGGKPGPGRGPENVPSYVADLGRRSRPGSFFSPSQSQ
                     LRQPGRGFTASFNYQLGRTRTPFGINPSTGQPYAPVPDRQSLAFSTNFSPTPFWNLSW
                     NTQYNITDGKFEGQNVRLERELHEWRAAFSYQKNPTGSFAFYFTIYLTDLPELKFDYD
                     QTTIER"
     gene            2198..>2630
                     /locus_tag="VFD73_01915"
     CDS             2198..>2630
                     /locus_tag="VFD73_01915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72787.1"
                     /translation="MRGWWTLGALAVLAACSSDDRTGPGVPPDVPATLSSTSLDGAIA
                     LTWTDNSYTSDPGNFQNYRVYSTSYDLDQNLCGTSWQLEGTTVSAEFVVGALTNGIPR
                     CFGVSAVSIDGFESDRSPLRSDTPRPDSRNIILYATQFQAAG"
BASE COUNT          496 a          911 c          783 g          440 t
ORIGIN      
        1 gatcctctgg ctgccgttca tcttccagga cacccggccg ggccggcact cgggaatcct
       61 gattccgcag ttcgggctca acgacctggt gcggcccacc cgcacctaca atcggcagat
      121 cagcaacatc gggtactact gggcgcccag cgactacttc gacctgacgg gccggctcga
      181 ctggttcgcc aatcggtacg tgcagtacgg cgtggcgggg cagtatcgct ggctcaaccg
      241 gttcatgagc ggctcggtcg gcgtcaacga gcaggacgag gtgggaggcg gctcgggctt
      301 caacctgcgc tgggaccaca gccagcagtt cagcctctcc agcagtctta cgttcaacat
      361 caactatgcc agcaacaccg cggtcgtgaa ccggaacgcc atcgatccct ttcagaacac
      421 ccaacagatc accagctcgc tcaactactc gaagcgactg tcctggggca ctctgacgct
      481 gggcggtaac cggcgccaga gtctcagcga cggcagcgtg cagcagctgc tgccggccgt
      541 gacgctctca ccggtgccga tcgccctggg ctccgacatc acctggtcgc ctgggctcag
      601 cttcaccaac aacaccacca agaacccttc ggccgatacg ctgctccgcg cgctgccggg
      661 cgggctgttc gataccgtca cgaccaacgc cacctcccgg gtaaccgcgc tcaacttcga
      721 cacgccggtg cgattcggcg gcttcaactg gcagaactcc atccagctca acgaccagca
      781 ctcggcgggg caggaggtcg tcacgttccg gaccccggat ttgtcgacgc ccgatcccag
      841 cgacagcatc gaggtgcagc gcaccttcct gagcgatttt caaagctcgt tcgactggga
      901 taccggcatc aacctcccgg tgctgttccg ggggagctgg aagatccagc caggcatcgg
      961 ggtagggaac acgacggcgg gcccgttcgc cattcgaaac cggaacacca acggcgactg
     1021 ggtaacgcag ggcaaacgct tccgattcgg cgccaccgcc tcgcccacgc tgttcgggtt
     1081 cttccccggc atcggtccgc tggcccggat ccggcacagc ctgtcgccgg tcatcacctg
     1141 gaactaccag ccggcggcga cggtgaacga agcgttcgcg cgtgccacga cggtgccggg
     1201 ccagccggtc gagctccgga gcgacgcgca gcagcaggtg agcgtggcct tgtcccagac
     1261 gttcgagggc aagtacaagg cgacgggcac cgataccagc gcgaccgagg aaagccggaa
     1321 gatccgcctg ctcagcatca ataccagcgg catcacgtat gatttcgaga aggccaagaa
     1381 gccgggcttc acgggctggg cgacgcaaac cgtcaccaac tcgatcctga gtgacctgct
     1441 gcccgggttc accctgagct tctcgcacga tctctggcgc ggcgtagtgg gggcggacag
     1501 ctccaagttc tcgccgttcc tgcagagcat gagcgccagc ttccaggttt ccgggaatac
     1561 cttccgctcg atcgcgtcga tcttcgggct gggtggcaag ccgggaccgg ggcgcgggcc
     1621 ggagaatgtg cccagctacg tggcggatct gggacgccgc agccggccgg gctcgttttt
     1681 cagcccgagc cagtcacagc tccggcagcc cgggcgcggc ttcaccgcca gcttcaacta
     1741 tcagctcggc aggacccgga cgccgttcgg catcaacccg tcgacggggc agccgtacgc
     1801 gcccgtgccg gaccggcaaa gccttgcgtt cagcacgaat ttttcgccca ccccgttctg
     1861 gaacctgtcc tggaacacgc agtacaacat cacggacggc aagttcgaag gccagaacgt
     1921 gcgactggag cgggagctcc acgaatggcg cgcggccttc agctatcaga agaacccgac
     1981 cgggagcttt gccttctatt tcacgatcta cctcactgac ctgccggagc tcaagttcga
     2041 ctacgaccag acgaccatcg aacgctgagc tgtccactgg cgagcagatc gcgagcagac
     2101 gctgttgttt aacccattag ccagcaacat gttaccaatt tcacccactg gcacgcgttt
     2161 cgcagatcgg ccccgcgaac cccttcggag aattcccatg cgtggctggt ggacactcgg
     2221 cgccctcgcc gtgctggcgg cctgctcgtc cgacgatcgc accggaccgg gcgtgccgcc
     2281 cgacgtaccg gcaaccctgt ccagtacgtc cctggacggc gccatcgccc tcacctggac
     2341 cgacaactcg tacacatcgg accctggcaa ctttcagaat tatcgcgtgt acagtaccag
     2401 ctacgacctc gatcagaacc tctgcggaac gagctggcag ctcgaaggga cgacggtctc
     2461 cgccgagttc gtcgtcgggg cgctgaccaa tggcataccg aggtgtttcg gggtgtccgc
     2521 ggtcagcatc gacggcttcg agagcgatcg ctcgcccctc cgctccgata ccccgcggcc
     2581 cgacagccgc aacatcattc tctacgcgac ccagtttcag gctgccggca
//
LOCUS       DASRPQ010000164         1073 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3781969, whole genome shotgun sequence.
ACCESSION   DASRPQ010000164 DASRPQ010000000
VERSION     DASRPQ010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3781969"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..891
                     /locus_tag="VFD73_01920"
     CDS             <1..891
                     /locus_tag="VFD73_01920"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72788.1"
                     /translation="ALQEALGQGEPVLRGTADMYVGLSELHRERDDLHTATELLLRSK
                     ELGVLAELSQNRYRWCVAMARIREAQGDLDGALDLLGEAERVYMGDFFPNVRPVAASV
                     SRVWVAQGRVGEALGWARERGLSVSDDLSYLREFEHITLARVLLARSTSDRTEHSMLE
                     AMELLERLLQAAEEGERTGSVIEILVLQALAHQTQGDIPAALVPLSRSLTLAEPEGYV
                     RMFMDEGTPMAVLLAKLHERSRKRPRAASTNVPLAYIERLLALLRGERVQEGTSPAAT
                     SSPAAPTPAQPLLDLLTERE"
BASE COUNT          200 a          349 c          336 g          188 t
ORIGIN      
        1 gcattgcagg aggctctggg acagggcgag ccggtcctgc ggggaacggc cgacatgtac
       61 gtgggactga gcgagctcca ccgtgagcgt gacgatctgc acaccgctac ggaactcctg
      121 ctgcgaagca aggagctggg cgtgctcgcc gagttgtcgc aaaaccggta tcgctggtgc
      181 gttgccatgg ctcgcatacg ggaggcccaa ggtgatctcg acggcgcgct cgacctgctc
      241 ggtgaggcag agcgcgtgta catgggagac ttcttcccca atgtgcgtcc tgtcgcggcg
      301 agcgtttcac gggtgtgggt cgcgcagggg agggtgggtg aagccctcgg ctgggcgcgt
      361 gagcgtggcc tctccgtttc ggatgacctc agctacctgc gcgagttcga gcacatcacc
      421 ctggccaggg tgctcctggc ccggtctacg agcgaccgta cagaacactc catgcttgag
      481 gcaatggaac tcctggagcg cctcctgcaa gcggcggaag aaggggagag gacgggaagc
      541 gtcatcgaaa tcctggtgct gcaggcactc gcccaccaga cgcaaggcga catccctgct
      601 gctcttgtgc cgctctcccg ctccctaacg ctggctgagc cagagggcta cgtccgaatg
      661 tttatggatg aaggcacacc aatggcggtc ctgctcgcaa agctccacga acgctcgcgg
      721 aaacgacctc gtgccgcctc gacgaacgtt cccctggcct acattgaacg gctcctggca
      781 ctgctgcgcg gagaacgggt tcaggaaggt acctcccctg ctgccacctc ctcacccgct
      841 gcaccaactc cggcccagcc gctgctcgac ctgctgaccg agcgcgaata ggaagtactg
      901 cgcctcattg cgactggcct ctccaatcga gagattgcgg cccgactcgt cctggcactg
      961 agcaccgtca aatcgtatgt caataccatc tacagtaagc tccaggtgga gagccgcacc
     1021 caggcggtgg cacgcgccag agcactccac ctgctctccg agtagccacc tcc
//
LOCUS       DASRPQ010000165         1155 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1583667, whole genome shotgun sequence.
ACCESSION   DASRPQ010000165 DASRPQ010000000
VERSION     DASRPQ010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1583667"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1013)
                     /locus_tag="VFD73_01925"
     CDS             complement(<1..1013)
                     /locus_tag="VFD73_01925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72789.1"
                     /translation="MNAADSFLPPPREVRAVIQGAFTAPITAASPRSANGIVYGQYHA
                     PILQYIFPENIPGTPFPENNFNTINFLAQGGYSSSAGTLVGQLNPWPSNVIPAITCAA
                     AAANTGGPYAANSGQTIPITGGAIGTQPISFVWTATGGTFSNASLSVTNWTAPQVAVS
                     TAFSLTLTATNCGGSSSATTSVTVAAASAPTVNPIPNQSVISGAAGSFNVTGSDPNVP
                     PATPLTWTVSQAGAPALLSLVITPAGATATVSFTAPTGVLAPTPITVTVTATNSIGLS
                     TSAVTTVTINPAPAILQPVANPVATSSVPVGSTDVSILITGTDPNVPARTPLLFTVTQ
                     APAG"
BASE COUNT          217 a          317 c          409 g          212 t
ORIGIN      
        1 ccagccgggg cctgcgtcac ggtgaagagt agcggcgtgc gcgcgggcac attgggatca
       61 gtgccggtga tcaggatgct gacgtccgta gagcccacgg gtactgaaga cgttgccacg
      121 ggattggcca cgggctgcag aatcgcggga gcgggattga tagtcaccgt cgtgactgcc
      181 gacgtggaaa gcccgatcga gttggttgcg gttacggtaa ccgtaatggg tgtgggcgcc
      241 agcacgccag tgggcgcggt gaagctcacg gttgcggttg cgccagcagg ggtaatcacc
      301 aggctcagca gagcaggcgc cccggcctgg ctgacagtcc aggtgagcgg agttgccggc
      361 ggcacgttag gatcagagcc ggtaacgttg aacgaacctg ccgctccgga aatcactgac
      421 tgattgggta tcggattcac ggtcggggcc gacgccgcgg cgacggtcac gctcgtggtc
      481 gcgctcgaag acccaccgca attggtggcc gtgagcgtca ggctgaacgc ggtcgagaca
      541 gctacctggg gcgccgtcca gttagtcacc gacaggctgg cattcgagaa tgttccacct
      601 gttgccgtcc agacaaagga gatgggctgt gttccaatgg cgccaccggt gatggggata
      661 gtctgtccgg agttagctgc gtatgggcct ccggtgttgg cggctgccgc tgcgcaggtt
      721 atagctggaa taacgttgct gggccaggga ttgagctgcc ccaccaatgt acccgccgat
      781 gagctatacc cgccctgggc caggaagttg atggtattga agttgttctc cgggaacggg
      841 gtgccgggaa tgttctctgg gaagatgtac tgcagaatag gagcatggta ctggccatag
      901 acaatcccgt tggccgatct gggagatgcg gcagtaatgg gagcggtaaa tgctccctgg
      961 atgactgctc gcacttcgcg cggcggcgga aggaagctgt ccgcggcatt catcacgcag
     1021 tccttgaccg gtttggctgg acttgaccca aacggcaggc acggcggacg gaagcgccag
     1081 cggcccctta ccgcgcccag agcattctcc gggcccggat cgacgccgat ggtgccaaaa
     1141 tcgcggtccg tggcc
//
LOCUS       DASRPQ010000166         2164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3160644, whole genome shotgun sequence.
ACCESSION   DASRPQ010000166 DASRPQ010000000
VERSION     DASRPQ010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3160644"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1008
                     /locus_tag="VFD73_01930"
     CDS             <1..1008
                     /locus_tag="VFD73_01930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72790.1"
                     /translation="QKWGLAVLVSEESLAAAPNHPQEALELARLALHIAERVGGTKEW
                     RWRIQGYCGGILCNALRACNDMPAARDARVRARKLWDDGAPGDPGGLLNEAMLPWVEA
                     ACHRAQRELPQARKRIEEALELDNGELRGKILLTKSYIHYALAEPELAIAAILEALPL
                     INAERDPRLAWASRHNLLLYLTQLGRAEEARQRMPEARRLAEQLGGELDLQRVSWVEA
                     KIAYGLGDLAEARNRFEKVRRAFDKPELSYDYALVSMELSQVLLEQGETARVCAIAKE
                     MFAIFRRQEVPVEALKALRIFYEAARQEAATVELARRVVRYLYRAQSDPGLRFEEAGA
                     E"
     gene            complement(1287..1460)
                     /locus_tag="VFD73_01935"
     CDS             complement(1287..1460)
                     /locus_tag="VFD73_01935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72791.1"
                     /translation="MGEFEEAELELEKVEETLAMADRIIEISRREQERIAAELPSALS
                     EPAQPDGPAVETA"
     gene            1621..2082
                     /locus_tag="VFD73_01940"
     CDS             1621..2082
                     /locus_tag="VFD73_01940"
                     /inference="COORDINATES: protein motif:HMM:TIGR02944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system Fe-S cluster assembly regulator"
                     /protein_id="HZI72792.1"
                     /translation="MIRITKQTDYGIVLLTHLASQPERHLNAPELASETQLPLPMVSK
                     ILKLLVREGLLLSHRGVKGGYSLTRPPGEITMAEIIACLEGPIAITECIDDGSDCSHE
                     RLCPVRSNWQRINAAVRGALEGITLAEMTHPLPGMQKLVTLGSGRPYGAQI"
BASE COUNT          409 a          711 c          715 g          329 t
ORIGIN      
        1 cagaaatggg ggctcgccgt gctggtctcc gaggagagcc ttgccgcggc gccgaaccat
       61 ccgcaggagg cgctggagct ggcgcggctc gccctgcaca tcgccgagcg ggtgggaggc
      121 accaaggagt ggcgctggag aattcagggc tattgcgggg gaatcctctg caacgcgctg
      181 cgcgcctgca acgacatgcc cgcagcccgg gacgcccgag tgcgcgcccg caagctctgg
      241 gacgacggcg ctcccggtga tccgggcggc ctgctcaacg aggccatgct gccctgggtc
      301 gaagccgcat gccatcgtgc tcagcgggag ctcccgcagg ctcgcaagag gatcgaggaa
      361 gccttggagc tggacaacgg cgagctgagg ggcaagatcc tgctcaccaa gtcgtacatc
      421 cactacgccc tggccgaacc ggagcttgcg atcgcggcga tcctggaagc gctccctctc
      481 atcaacgccg agcgtgaccc gcggttggca tgggccagcc gccacaatct gctcttgtac
      541 ctgacccagc tcggccgtgc cgaggaggcg cggcagagga tgcccgaagc acggcggctg
      601 gccgagcagc taggcggcga gttggacctt cagcgtgtca gctgggtgga ggccaagatc
      661 gcctacggtc tcggagacct cgccgaggcg cgcaaccggt tcgagaaggt gcgccgtgct
      721 ttcgacaagc ccgagctgag ctacgactac gccctggtga gcatggagct gtcacaagtg
      781 ctcctcgaac agggcgaaac ggcgcgggtg tgcgccatcg ccaaggagat gttcgcgatc
      841 ttccgcaggc aggaggtgcc cgtggaggct ctcaaagccc tgcggatctt ctacgaggcg
      901 gcccggcagg aggccgccac ggtcgagctg gcgcggcggg tggtccggta tctctaccgg
      961 gcgcagagcg atcccgggct acgttttgaa gaggccggag ccgaatgaag gcggcggcca
     1021 cttgtttcat ggcggagacg ctcgcctgac ctcatcgcct gagcctgagc cgagaaacga
     1081 aatcttgaga aacgggaagg aagaactttt ctccgggtag ccatggctac ccagtgggta
     1141 gacccctcta cccagcgggt agaccccgcc cggcgtggaa ggcgagcgcc ggattcgcgc
     1201 agagatcgca ggccctgggg ctccccgaac agagtcttga tggcgagtgc ccctcatgtc
     1261 atcacggaat ctgtccccaa aaagagctat gccgtctcga cggccggacc gtccggctgc
     1321 gccggctcgg acagagcgga cggcagctcg gcggcgatcc gctcctgctc ccggcgcgag
     1381 atctcgatga tccgatccgc catcgcgagc gtctcctcca ccttctccag ctccagctcg
     1441 gcttcctcga attcacccat gcagcagatc ctccactcgc ctatccgatt ctgggatgca
     1501 gattccgtac ccgtacccgg ccgggagcgc ccttgacttt ccccaccatc tgagatggaa
     1561 tcaggaccga tccggtactg tttcaaccgg tggagccatt cgacgggagc aacagcgggc
     1621 atgatccgaa tcaccaagca gaccgactac gggatcgtcc tcctgacgca tctggcatcg
     1681 cagccggagc gccatctgaa cgctcccgag ctggcgtccg agacccagct gccgctgccc
     1741 atggtgagca agatcctgaa gctcctcgtg cgcgaggggc tgctgctgtc ccaccgcggg
     1801 gtcaaggggg gctacagcct gacccgcccg ccgggcgaga tcacgatggc ggagatcatc
     1861 gcgtgcctgg aagggccgat cgccatcacc gagtgcatcg acgacggcag cgactgctcc
     1921 cacgagcggc tctgccccgt gcgcagcaac tggcaacgca tcaacgccgc ggtccgggga
     1981 gccctggagg gcatcaccct ggccgagatg acccatccgc tgccggggat gcagaagctg
     2041 gtcacgctcg gaagcggcag gccgtacgga gcccagattt aaacgacacg gtcgaaaaga
     2101 cctggatcga gggagacatg cagagcagct caagcagcac catcgaacaa ttcgcgacgc
     2161 agga
//
LOCUS       DASRPQ010000167         1854 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1270627, whole genome shotgun sequence.
ACCESSION   DASRPQ010000167 DASRPQ010000000
VERSION     DASRPQ010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1854)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1854)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1854
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1270627"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1346
                     /locus_tag="VFD73_01945"
     CDS             <1..1346
                     /locus_tag="VFD73_01945"
                     /inference="COORDINATES: protein motif:HMM:NF024703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="helicase C-terminal domain-containing protein"
                     /protein_id="HZI72793.1"
                     /translation="FERNGRGLAPTLSHELNSHPDLLSRASLDLLQQRLLPGVGDARR
                     SSEALFLRLLHRLEDVPSGQLRLDDDFASDPVWQQGLGFDLDATLGSFRQLREAVEII
                     ADRLSQAEETERRAQLLQELRGVMRRLETLSDGLNRSLRPAAGGAPVVRWMERSARGQ
                     HVSLSVVPLDLAPLLRELLFKRLQTVVLTSATLAAAGEFEFLESRLGLSGESSPVTIR
                     EIFPSPFDYPSQCVFGVPNDLPEPRDDEAGHGAAVVQVVSDLAYASDGGMFVLFTSHA
                     ALRRAAQELRAGLGSRWPILVQGESPRDVLLRRFREAENAILLGTDSFWEGVDVPGRA
                     LRALILNKLPFKVPSEPITAARLERLAEEGLDGFMHYLLPHAALKLKQGFGRLIRSRQ
                     DTGIVILLDSRVVTKRYGHLLLSGLPRAERIVGSWRQVRIRCEDFFARQGIGAPV"
     gene            1343..>1854
                     /locus_tag="VFD73_01950"
     CDS             1343..>1854
                     /locus_tag="VFD73_01950"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HZI72794.1"
                     /translation="MMPLRPSKIIGIGRNYVAHARELGNEVPEVPILFFKPPTSLIGP
                     GEPILLPGVSQWVEFEGEIGVVIARRIRNADADLAERSIGGYVCVNDVTCRDLQKADG
                     QWGRAKGFDTFCPAGPRVASGLDWRNLELTCRVNGVERQRAKATEMHFSIPDLVSFLS
                     QIMTLEPGDL"
BASE COUNT          315 a          558 c          619 g          362 t
ORIGIN      
        1 gatttgagcg gaacggccgg ggtctggctc cgaccctatc ccacgagctg aatagccatc
       61 ccgatctgtt gagccgtgcc agtctggacc tgttgcagca gcggctcctc cccggcgtgg
      121 gtgatgcgcg gaggtcgagc gaggcactct tcctccgact tctgcaccgg ctggaggacg
      181 ttcccagcgg tcagctgcgt ctggacgacg acttcgcgag cgaccctgtc tggcagcaag
      241 ggctgggctt cgatctggac gccaccttgg gctcgtttcg ccagctccgc gaggcggtag
      301 agatcatcgc cgaccgattg tcgcaggccg aggagaccga gcggcgagct caactgctgc
      361 aggagctgcg tggagtcatg cgccggctgg agactttatc ggacggattg aaccgttcgc
      421 tccgccccgc agctggcggt gcaccagtgg tccgctggat ggagcggtcg gcccgcggcc
      481 agcatgtgag tttgtcagtg gtcccgctcg acctcgcgcc gctcttgcga gagcttttgt
      541 tcaagcggct gcagaccgtc gtgcttacca gtgccacgct ggcggccgcc ggcgagttcg
      601 agtttctgga gtcgcgcctg ggactcagtg gcgagtcgtc gccggttacc atacgcgaga
      661 tattcccctc gccgttcgac tatccatccc agtgcgtgtt cggagtgccc aacgatttgc
      721 cggagccacg ggatgacgaa gccggccacg gggcggctgt ggtgcaggtt gtgagcgatc
      781 tggcgtacgc gtcggatggc gggatgtttg tcctcttcac cagtcacgcg gcgctgcgga
      841 gagccgcaca ggagttgaga gcagggctgg gaagccgctg gccgattctg gtccagggtg
      901 aatccccccg ggatgtcctg ctccggcggt tccgtgaagc ggaaaacgcc attctgctgg
      961 ggaccgactc gttttgggaa ggcgttgatg ttccggggcg tgcactgcgc gcactcattc
     1021 tgaacaagct acctttcaaa gtgccgtcgg agccgatcac ggctgcacgg ctcgagcggc
     1081 tggcagaaga gggactggat gggttcatgc actatctgct ccctcatgcc gcgctcaagt
     1141 tgaagcaggg attcgggcgg ctcatccgga gccgacagga caccgggatc gtgatcctgc
     1201 tggacagcag ggtcgtgacg aagcgctacg gccacctgct cttgagcgga cttcctcggg
     1261 ccgagcgcat cgtcggcagc tggcgtcagg tgcgaattcg gtgtgaggac ttctttgcca
     1321 ggcaagggat cggtgctccg gtatgatgcc cctgcggccg tcgaagatca ttggaatcgg
     1381 tcgcaactac gtcgctcacg ctcgggagct cggcaatgaa gtgcccgagg ttcccatcct
     1441 gttcttcaag ccgcccacct cgctcattgg accaggtgag ccaatcctgc tgccgggcgt
     1501 ctcccaatgg gtggagttcg aaggggagat cggcgtagtg atcgcacgac ggatccgaaa
     1561 cgccgacgcg gacctggccg aacggtcaat tggtggatac gtctgcgtga acgacgtcac
     1621 ctgccgagat ttgcagaagg ccgacggcca gtggggcaga gccaagggct tcgatacctt
     1681 ttgcccggcc ggtccccgag tcgccagcgg tctcgattgg cgcaatctgg aactgacctg
     1741 ccgagtcaac ggagtcgaac gccagcgcgc caaggcaaca gagatgcact tctccattcc
     1801 ggacctagtc tcgttcttga gtcagatcat gacactggag ccaggcgacc tcat
//
LOCUS       DASRPQ010000168         1076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1584016, whole genome shotgun sequence.
ACCESSION   DASRPQ010000168 DASRPQ010000000
VERSION     DASRPQ010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1584016"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1076)
                     /locus_tag="VFD73_01955"
     CDS             complement(<1..>1076)
                     /locus_tag="VFD73_01955"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HZI72795.1"
                     /translation="DRSLNVGRTLNEGLVGGLQIITAGVHVVVDQTKERTKDLGFFGQ
                     EEVLIKDRLNVTAGIRGDQSSNNTQADKLYYYPKGALSYRFGSIKRGLIDELKIRGAI
                     GESGNEPLYEKKFSELNSVNIAGVPAQTINATIAGADVHPERQREIEAGIDATLFGSR
                     ANLEATVYDKHISDLLLNRSLAPVSGFTTQFFNGGVMRTRGLELGLNVIPIQTRSLQW
                     SSNFNFFMSRSKMLSMPVPTFRQSANASYGSLQIEVGKSPTQVIAWVPSDPSNPNSPR
                     KDAVIGDYNPDYKLSWSSDLSFKKFKLYWLWDHYQGGWIHNYTELLYDFAGTTKDYTD
                     PVPQGSPLAAYGSQMGPARIKAGT"
BASE COUNT          179 a          337 c          333 g          227 t
ORIGIN      
        1 cgtccccgcc ttgatacgag ccggccccat ctgactgcca tatgccgcca ggggcgagcc
       61 ctggggcacc gggtccgtgt aatccttggt ggtgccggcg aagtcgtaga gcagctcggt
      121 gtagttatgg atccagccgc cctggtaatg atcccacagc cagtagagct tgaacttctt
      181 gaacgacaga tcgctcgacc acgacagctt gtaatcggga ttgtaatcgc cgatcaccgc
      241 gtccttccgc gggctgttcg gattcgaggg atccgagggg acccaggcga tcacctgcgt
      301 gggcgacttc ccgacctcga tctgcagcga cccgtagctc gcgttcgccg actgccggaa
      361 ggttggcacc ggcatcgaga gcattttgct ccggctcatg aagaagttga aattcgagct
      421 ccactggagc gagcgggtct ggatcggaat gacgttgagc ccgagctcca ggcccctcgt
      481 ccgcatcacg ccgccgttga agaactgggt ggtgaagccg ctgaccggag ccagcgaccg
      541 gttcagcagc aggtcggaga tgtgcttgtc gtaaaccgtc gcttcgagat tcgcccggct
      601 gccgaacagg gtggcatcga tgccggcctc gatctcccgc tgccgctcgg ggtgcacatc
      661 cgcacccgcg atggtggcgt tgatcgtctg tgccggtaca cccgcgatgt tgacgctgtt
      721 cagctcgctg aactttttct catacagcgg ctcattgcct gattcgccga tcgcgccgcg
      781 gattttcagt tcgtcaatca ggccacgctt gatggagccg aaccggtagg acagcgcgcc
      841 cttcgggtag tagtagagct tgtcggcctg ggtgttgttg ctgctctggt cgccccggat
      901 cccggccgtc acgttcagcc ggtccttgat cagcacctct tcctggccga aaaagcccag
      961 gtccttggtg cgctccttgg tctggtccac cactacgtgg acgccggcgg taatgatctg
     1021 gagcccaccg accaggcctt cgttcagggt ccggccgacg ttgagactgc gatcct
//
LOCUS       DASRPQ010000169         1039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1903748, whole genome shotgun sequence.
ACCESSION   DASRPQ010000169 DASRPQ010000000
VERSION     DASRPQ010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1903748"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            802..>1039
                     /locus_tag="VFD73_01960"
     CDS             802..>1039
                     /locus_tag="VFD73_01960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72796.1"
                     /translation="MKHLKVRIRRLPSDRSQSPSRPVIVELIEMPTGMSLAPSYSVRR
                     VFFSAEPSKPGGKSGTEDSVGRISIEYIRIIRSGG"
BASE COUNT          183 a          307 c          341 g          208 t
ORIGIN      
        1 caccggaccc tgcacttgca ggtcgcggag gttgcctggc gggcggatgg gatgtgcctg
       61 gtcgaggggc agctggatgg tcatgccttc ctccggtgtg cggctcccct catgctgacc
      121 cagcacgcac cctctgtaca cccggcggac cgcctcagtc agcagcagcg ccgtccgggt
      181 cccaggccag gccgccggtc agtgcattga tgacgctctc tgtttcgcga cctcacgaca
      241 tgcccggcat gtaattgcta acgcagcgtg accggcaagg attatgcgcc cagtactaga
      301 tcgccgattc ggaatgaggg gcgcgaggct ttcaaggatg ttgcctcgcg ctcgtaaggc
      361 ccggttctgt gcgcgatacg gtaggggcgg ccgccagagg gcattgcggg gccgggattc
      421 aggctggccg acacggttgg gcgaaagctg acttgggaga cgctgatcgc ctggttcggc
      481 cttgcctccg ccctcttgcc cgtgactgga agctaaccat aagcaacggg aggcatccgc
      541 gccgcgtagt accgctagtg tgagcatccc aggggcacca ccgcccttcg cactagatgc
      601 ccgcttccat ttgctcatgc tgagcgacgc agcgatgctc catcttgagt gtcgcgctga
      661 accgttgacc taggcatgga ggaagtatgt gcctgggccg gcttggaccc aggtgtgtag
      721 aggtgttttt cgccagcgag cgggtatttc gtaagaatcc tgcgagttgc agcgtcccag
      781 ttgaccgata ggaggcgccg tgtgaaacac ctcaaggtcc gcatccggcg gctaccgtcg
      841 gatcggtcac agtctccatc gcggccggtc atcgtagagc tgatagaaat gccgacgggc
      901 atgagccttg cgccttcata ctccgtcagg cgcgtgttct tttcggctga accgtcaaag
      961 ccggggggga aatccgggac tgaggatagc gtgggacgga tctccataga gtacatccga
     1021 attattcgga gcggcggta
//
LOCUS       DASRPQ010000170         2115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3782554, whole genome shotgun sequence.
ACCESSION   DASRPQ010000170 DASRPQ010000000
VERSION     DASRPQ010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3782554"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            199..426
                     /locus_tag="VFD73_01965"
     CDS             199..426
                     /locus_tag="VFD73_01965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72797.1"
                     /translation="MPIAVPVGLAASLAASTLVSGPTDLSNVASASAEAGADSTLVIA
                     AFSESGAGSELAGRLVAPASGEWLFEEAVSR"
     gene            423..899
                     /locus_tag="VFD73_01970"
     CDS             423..899
                     /locus_tag="VFD73_01970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72798.1"
                     /translation="MTGSDPRGQGGKGPLLAALVLLLALIVGGLAGVALDRHVLLRRG
                     FPDGFDHHRPPRDREFRKRFAKELGLSPEQQTRIDSIMDRQSRELRAVRGTVQPQLDS
                     IIGRTRRALDSVLTPEQRQKAEEIRRRHPRPSGPPPGDFRGADRPPPGEPPPEPPR"
     gene            1004..>2115
                     /locus_tag="VFD73_01975"
     CDS             1004..>2115
                     /locus_tag="VFD73_01975"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HZI72799.1"
                     /translation="MPRHTSSPSSQSRVLVTETGDAPVGPLLPPVRRGLPDDLLREAA
                     HRLGIMSLVIAGLLVIEFLLVHFLFGLPGTLTPEAAAKLSRWLPVFDLIGPATILVSL
                     ALFWYTRNRRRKPRFLLDLALGYEVFLALTVGMLNYAVMPPTGVSWIAVIIVMFAAVV
                     PSTPQKTLVTALVAALMDPAAAVIWEALGRHSVGTQQAFLLAIPNFLCALVAPVISHI
                     ITRLGREVRRAREMGSYVLGDLIGRGGMGEVWEARHRFLARPAAIKLIQPDVLSAVTK
                     VQADVLVQRFRREARAAANLRSPHTIQLYDFGIASDGTFYYVMELLNGMDLQTLIEEH
                     GPLPPSRAVHILRQAAESLAEAHDRGLVHRDIKPAN"
BASE COUNT          343 a          696 c          674 g          402 t
ORIGIN      
        1 ggttgaatga gctggctttg gcgcgagcca cggcgcgatc ccaaactcgg agcagccctt
       61 cgcagcctcg aaaccgagga cgccggttcc ctcaatcctg atctgctacg gcaaaggatc
      121 ttggccgccg ccgggccgtc attgcggaag ttgcggtctc ctgccgcacc tcaatggtgg
      181 gagtggattt cgcgctggat gccgatcgct gtgccggtcg ggctggcggc ctccctggcg
      241 gccagcactc tggtgtccgg tcccactgac ctgtcgaacg tcgcctcagc cagcgctgaa
      301 gccggcgccg atagcaccct ggtgatcgcc gcgttctctg aaagcggagc cggcagcgaa
      361 ttggccggcc ggctggttgc tccggcaagc ggtgagtggc tattcgaaga ggcggtcagc
      421 cgatgacggg cagtgaccct cggggccagg ggggaaaggg accgctgctg gcggcactgg
      481 tgctgctgct tgccctgata gtgggtgggc tggcaggcgt tgctctcgat cgtcacgtat
      541 tgctccgacg cggctttcct gatggtttcg accatcaccg tccaccgcgg gatcgagagt
      601 tcagaaagcg gtttgccaaa gagctcgggc tctcaccaga gcagcagacc cggatcgact
      661 ccatcatgga tcgtcagagc cgggagctgc gggcggtcag aggcacggtt cagccccagc
      721 tcgattccat catcggccgg acccggcggg cgttggactc ggttcttacg ccggagcagc
      781 ggcagaaggc agaagagatc cgccgtcgcc atccccgacc atctggccca ccgccgggtg
      841 atttccgcgg agcggatcga ccgccgccag gggagccccc tcccgaaccg ccgaggtgag
      901 cggttcaacc cttatcgacg gcaggctggc ggcagaagcc tcggaatcgt agccttcctc
      961 aacctagaga gcatggcttc cttctgacct gacgcgattc aacgtgcctc gccataccag
     1021 ttctcccagc tcccagtccc gcgtcctcgt caccgaaacc ggcgatgctc ctgtgggccc
     1081 gctccttccg ccggtgcggc gggggttgcc cgatgatctg ctaagagaag cggcccaccg
     1141 gctcggcatc atgagtctgg tgatcgctgg gctgctcgtc atcgaattcc tgctggtcca
     1201 cttcctcttt gggttacctg ggacactgac gcccgaggct gccgccaagt tgtcccgctg
     1261 gcttccggtt tttgacctga tcgggcccgc aaccatcctc gtctccctgg ccctgttctg
     1321 gtataccaga aaccggagga ggaagccgcg attccttctc gacctggcgc tcgggtacga
     1381 ggtatttctg gccctgaccg tcgggatgct gaactacgcc gtcatgccac ccaccggcgt
     1441 gtcctggatt gcggtcatca tcgtgatgtt tgccgcagtc gtgccgagta cgccgcagaa
     1501 gacgctcgtg accgcgttgg tcgcggcgct gatggatccc gccgccgccg tcatctggga
     1561 agcattaggc cgacattcgg tcggcaccca gcaggcattc ctgctggcca ttccgaattt
     1621 cctctgcgcc ctggtggcgc ccgtcatctc ccacatcatc acccgtctgg gccgagaggt
     1681 gcggcgcgcg cgcgagatgg gaagctatgt cctgggcgat ttgatcggac gaggtggaat
     1741 gggcgaggtg tgggaggcac ggcatcggtt tctcgcccgg ccagcggcca tcaagctgat
     1801 ccagccggac gtcctgagcg ccgtcaccaa ggtgcaggcc gatgtcctgg ttcagcggtt
     1861 ccggcgcgag gcacgagcag cggccaatct gcggtcacct catactatcc agctgtacga
     1921 cttcggtatc gccagcgacg gcaccttcta ctatgtgatg gagctgctca acggcatgga
     1981 tctgcagacg ctcatcgagg agcacggccc cctaccaccg tctcgcgccg tgcacatcct
     2041 gcggcaggcg gccgaatcgc tggccgaagc ccacgatcgc gggctggtcc accgcgatat
     2101 caagccggcc aacat
//
LOCUS       DASRPQ010000171         2020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3161152, whole genome shotgun sequence.
ACCESSION   DASRPQ010000171 DASRPQ010000000
VERSION     DASRPQ010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3161152"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1167
                     /locus_tag="VFD73_01980"
     CDS             <1..1167
                     /locus_tag="VFD73_01980"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HZI72800.1"
                     /translation="NSPPSVLAEMVTATLGAQCMSWATSPAATELEQITMTWLRQMLG
                     LPEGFTGVIQDTASTATLVALLSARQRYQSEPGDESSGRLTVYASTEAHSSVEKAVKL
                     SGIGLEQFRRIAVDDEYAMRADLLAQAIQRDLGNGYRPACVVATAGTTSSTAIDPLSA
                     VAEICDGRNVWLHVDAAYAGAAAIVPELRPLFAGIERADSIVFNPHKWMLVNFDCSAY
                     FVRDTQALLRTFQITPEYLRTSQDAEVVNYRDWGIQLGRRFRALKLWFVIRQYGVNGL
                     RDMIRHHVGLAHQLAGWIRETPGFEVVAPVRFGLVCFRYCPRAAAGLDSERLNDLNRR
                     VLAKVNAGRKVFLTRTMLGENYVLRMAIGQRLTMRSHVELAWDLIQEAASSETL"
     gene            complement(1164..>2020)
                     /locus_tag="VFD73_01985"
     CDS             complement(1164..>2020)
                     /locus_tag="VFD73_01985"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI72801.1"
                     /translation="GEPVGDIASLTGWEFLQDVLLVDQSPIGRSPRSNPVTYIRAFDE
                     IRELFAAQPLARQRKYTSATFSFNLAGGRCEACEGAGHVQVQMVFLADVFVPCEACGG
                     SRYRPEVLDVRIQGRSIHDVLQWTVDEAVGRFRRQPRLGSALWQLQQVGLGYLRLGQP
                     ATTLSGGEAQRLKIARELTQAGKREGRKLYILDEPTTGLHLDDVRVLIHVLDRLVDAG
                     HTVVVIEHHLDVIKRADWVIDMGPEAGPSGGKVVGQGTPEEIAEIAASHTGRYLQPLL
                     APAPALAG"
BASE COUNT          370 a          635 c          652 g          363 t
ORIGIN      
        1 aacagcccgc cttccgttct cgccgagatg gtcaccgcta cactcggggc ccaatgcatg
       61 tcgtgggcaa cttctccggc ggcgactgag ctggagcaaa ttaccatgac ctggctgcgg
      121 cagatgctcg ggttgcccga ggggtttacc ggagtgattc aggacaccgc ttcaactgca
      181 acgctggtgg cgctgctctc ggcacggcag cgataccaat cggaaccggg tgatgagagc
      241 agcggcagac tcacggttta cgcctccacc gaggcgcact cttcggtgga gaaagcagta
      301 aagctttcgg gtatcggttt ggagcagttc cgcaggattg cggtggacga tgaatacgcc
      361 atgcgagccg accttctggc gcaggcgatc cagcgggatc tcggcaacgg atatcgaccc
      421 gcatgcgtcg tcgcgacggc cggaacaacg tcgtcgaccg cgatcgatcc gctttcagcc
      481 gtggcggaga tctgcgacgg ccgaaacgtc tggctccatg tggatgccgc gtatgccggc
      541 gcggcggcga tcgtaccgga actgcggccg ctcttcgccg ggatcgagcg ggctgacagc
      601 atcgtcttca acccgcacaa gtggatgctg gtgaacttcg actgcagtgc gtatttcgtg
      661 cgcgacaccc aggcgctgct ccgcaccttt cagatcacgc cggagtatct gcgcacatcg
      721 caagatgccg aggtcgtcaa ctaccgggat tggggaatac agcttggccg gcggttccgc
      781 gcgctcaagc tatggttcgt cattcggcag tacggggtca acggccttcg tgacatgatc
      841 cggcatcacg tcggcctggc tcaccaactc gccggctgga tccgggaaac gccaggattc
      901 gaggtggtgg ccccggtgcg attcgggctg gtctgcttcc gctattgtcc cagagcagcc
      961 gcaggtctgg actccgagcg gctcaacgat ctcaatcgca gagtgctcgc caaggtcaac
     1021 gccggccgaa aggtttttct cacccgcacg atgctgggcg agaactacgt actccgcatg
     1081 gcgattggcc agcggctgac catgcggagc cacgtggaac tggcgtggga cctgattcag
     1141 gaagcggcgt cgagtgagac gctctaaccc gcgagggcgg gggcaggcgc gagcaatggc
     1201 tgcagatacc gcccggtatg ggaggctgca atctcggcga tctcttccgg cgttccctgt
     1261 ccgacgacct ttccgccgga aggaccggct tcgggtccca tatcgatgac ccaatcggcc
     1321 cgcttgatga catccaggtg gtgctcgatg accacaacgg tgtgtccggc gtcgaccagg
     1381 cgatccagta cgtggatgag cactcggacg tcgtcgaggt gcagcccggt ggtgggctca
     1441 tccagaatgt agagcttccg accctcgcgc tttccggcct gggtcagctc gcgggcgatc
     1501 ttgagacgtt gcgcttcacc cccggagagt gtcgtcgccg gctggcccag ccggaggtac
     1561 cccaacccga cctgctgcag ctgccacagg gcgctgccga gccggggctg acgccggaac
     1621 cgcccgaccg cttcgtccac cgtccattgc aacacgtcgt gaatcgagcg gccctggatc
     1681 cgaacgtcca aaacctcggg acggtagcgc gatccgccgc aggcttcgca aggcacgaag
     1741 acgtcggcga gaaacaccat ctgcacctgc acgtggccgg cgccctcgca ggcctcgcaa
     1801 cggcctccag ccaggttgaa ggaaaaggtg gccgacgtgt acttccgttg ccgggcgagc
     1861 ggttgtgcgg caaacaattc gcggatttcg tcgaatgctc tgatgtaagt caccgggttg
     1921 gagcggggcg accgaccgat cggtgattga tcgaccagta ggacatcctg caggaactcc
     1981 cacccggtca gggaggcaat gtcgcccacc ggctctccca
//
LOCUS       DASRPQ010000172         1361 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2534647, whole genome shotgun sequence.
ACCESSION   DASRPQ010000172 DASRPQ010000000
VERSION     DASRPQ010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1361
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2534647"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..322)
                     /locus_tag="VFD73_01990"
     CDS             complement(<1..322)
                     /locus_tag="VFD73_01990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72802.1"
                     /translation="MPTMMRAIVPVILAVTAAAPALAQKQEPPPVGTPKDLKLPPRHE
                     ISLPNGMAVTLVPFGTVPKAAVVLAVRAGRVNERTDQVWLSQLTADLMQEGTRTISSA
                     KVAEL"
     gene            complement(339..>1361)
                     /locus_tag="VFD73_01995"
     CDS             complement(339..>1361)
                     /locus_tag="VFD73_01995"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HZI72803.1"
                     /translation="TILWGEADRMHGLAIDSSNLKNQQEVVKNEVRVNVMNQPYGSFP
                     WIDMPMRANTNWYNAHNFYGEFKDLDAANLNDAAAFFRTYYAPNNAVLVVTGDFNPDE
                     TRSWIEKYFSGIPSAPQPPKPDLTEPKQSQERRFSKVDSLATRPAIGLAYHVPERFTP
                     QWYAFGLLDQILGQGRDSRFYNELVRKRGLTGEVSAGINWGLGNMYDYNGPMLWLVDA
                     FHDSDKSPDSLIAAFDAAIEPLRNTPISQNELARALVKLRSSFYSEIESFSGFGRANL
                     LASFALFDDDPGRINRLEPEFAKVTPELLMATAREYLAPTNRTILTIVPGKKVSASAG
                     SPGATD"
BASE COUNT          229 a          405 c          449 g          278 t
ORIGIN      
        1 tcagctccgc caccttggcc gaggaaattg tcctggtccc ttcctgcatc aggtcggcgg
       61 tcagctgtga gagccacacc tggtcagtcc gctcattgac ccgtcccgca cggacggcca
      121 ggacaacggc cgccttgggt acggtgccga acgggaccag cgtcacggcc atgccgttcg
      181 gcaacgagat ctcgtgccga ggcgggagct tcaggtcttt gggggttccg actggaggag
      241 gctcctgttt ctgggccagg gcaggtgccg ccgccgtgac agcgaggatg accggaacga
      301 tcgctctcat catcgtgggc atggcgtgtt ctccccgctc agtcggtggc gccgggggat
      361 ccggcgctgg ccgaaacctt ctttcccgga acgatggtga ggatggttcg gttggttggc
      421 gcgagatact ctcgcgccgt tgccatcagc agctcgggtg tcaccttggc aaactccggc
      481 tccagccgat tgattctgcc cggatcgtca tcgaacagcg cgaaggaggc cagcagattg
      541 gcccggccga agccggagaa cgattcgatc tcggaataga agctggagcg cagcttcacc
      601 agtgcccgcg ccagctcgtt ttgcgagatc ggagtgttcc gtagcggctc gatcgccgca
      661 tcgaatgctg caatcaggga gtcgggcgac ttgtcgctgt cgtgaaatgc gtcgaccagc
      721 caaagcatgg gaccgttgta gtcgtacatg ttacccaggc cccagttgat cccggccgaa
      781 acctcaccgg tcagtccgcg cttccgcacc agctcattgt agaaccggct gtcgcgccct
      841 tgtcccagga tctggtcgag gagtccgaag gcgtaccact gaggcgtgaa tcgctccggc
      901 acgtggtacg cgaggccgat cgccgggcgg gtcgccagcg aatcgacctt ggaaaaccgt
      961 ctctcctgag actgcttggg ctcggtgagg tcgggcttgg gtggctgcgg agccgaggga
     1021 atgccgctga aatatttctc gatccaggag cgggtctcgt cgggattgaa gtcgccggtt
     1081 accaccagga cggcgttgtt gggagcgtag taggtgcgga agaaggccgc ggcatcgttc
     1141 aggttagcgg cgtcgagatc cttgaactcg ccgtagaagt tgtgggcgtt gtaccagttg
     1201 gtgttggccc gcatcggcat gtcgatccag gggaagctgc cgtacggctg gttcatcacg
     1261 ttcacccgca cctcgttctt caccacctcc tgctggttct tgagattact gctgtcgatc
     1321 gcgagcccgt gcatccggtc ggcttcgccc cagaggatcg t
//
LOCUS       DASRPQ010000173         1024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3464953, whole genome shotgun sequence.
ACCESSION   DASRPQ010000173 DASRPQ010000000
VERSION     DASRPQ010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3464953"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..938)
                     /locus_tag="VFD73_02000"
     CDS             complement(<1..938)
                     /locus_tag="VFD73_02000"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI72804.1"
                     /translation="MPPQFSIVVFSHLRWNFVYQRPQHLLSRLAATRPVFFIEEPEFD
                     ADGPVRWERTSPHANVTVLRPRTPIEPPGFTSEQLSLLAPLMQELASELESTRIVAWL
                     YTPLALPLLRALRPEVVVYDCMDELSLFLGAPPELLTREAELLRCADVMFTGGPSLYR
                     AKQARHPNVHCFPSSVDAAHFRSAREGQPSQVAEAVDQSALPHPRLGFYGVIDERLDI
                     GLLDYLAEHRPDWQFVLVGPVVKIDPARLPHRPNVHYFGQRSYDELPRYLVGWDVCLL
                     PFALNEATRFISPTKTLEYMAAERPIVSTPITDVAEP"
BASE COUNT          222 a          302 c          329 g          171 t
ORIGIN      
        1 ggctccgcca cgtcagtgat cggggtgctc acgatgggac gctcggccgc catgtattcc
       61 agcgtcttgg tgggactgat gaacctggtg gcctcgttca gcgcgaacgg aaggaggcac
      121 acatcccagc ccaccagata gcggggcagc tcgtcgtacg acctctgccc gaaataatga
      181 acgttgggcc ggtgcggcaa cctcgcaggg tcaatcttca ccaccgggcc aaccaggacg
      241 aactgccaat ccggtcggtg ctcggccaga tagtcgagca agccgatatc cagacgctca
      301 tcgatcacac cgtagaagcc cagccgcgga tggggtagag ccgactggtc gaccgcttcg
      361 gcgacctgag agggctgccc ctcgcgtgcg gagcggaagt gtgcggcatc cacgctgctg
      421 ggaaagcagt gtacgttggg atgccgggcc tgcttcgccc ggtagaggct gggtccgccg
      481 gtaaacatca cgtcggcgca ccgcaacagc tccgcttctc gagtcaacag ctccggaggt
      541 gctcccagaa acagcgaaag ctcgtccatg cagtcataga ccacgacctc gggcctgagc
      601 gcgcggagca gcggcaaggc cagcggcgtg tagagccagg caacaatccg ggtactctct
      661 aattcactcg cgagttcctg catcagtggg gcaagcagag acagctgctc ggaagtaaac
      721 ccaggtggct cgatcggggt tcgcggacgc agaacagtga cattggcatg agggctcgtt
      781 cgttcccagc gtactgggcc atcggcatcg aactctggct cttcaatgaa aaaaaccggc
      841 cgggttgcgg ccaagcggga aagcaggtgc tgggggcgct gataaacgaa gttccagcgg
      901 aggtgcgaaa acacgacgat cgaaaactga ggcggcatga agcgctcgtg gttgaaagaa
      961 cttcgggctc gttggtctag agatgtgcta tggacaaacc cttcctctcc cggagcagcc
     1021 ctac
//
LOCUS       DASRPQ010000174         1277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4405378, whole genome shotgun sequence.
ACCESSION   DASRPQ010000174 DASRPQ010000000
VERSION     DASRPQ010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4405378"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..553)
                     /locus_tag="VFD73_02005"
     CDS             complement(<1..553)
                     /locus_tag="VFD73_02005"
                     /inference="COORDINATES: protein motif:HMM:NF015674.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF308 domain-containing protein"
                     /protein_id="HZI72805.1"
                     /translation="MDERTDISSRTRAGLARLAGPWWMFLLTGVAWLILAWIALRFNP
                     ASIPTVGVLLGVYFLVATINEFFIASVMPGWRWLHIVMGIIFAFGAGWSFARPYNAFW
                     ALASILGLLLIFQGTFYIITSVSTREVNSMWWLGLLVGILEILLGFWASQQYRPVQGA
                     LLLLWVGFFALFRGISEIVIAFEL"
     gene            complement(773..>1277)
                     /locus_tag="VFD73_02010"
     CDS             complement(773..>1277)
                     /locus_tag="VFD73_02010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72806.1"
                     /translation="NGDFQHLPSWRELVVATALSLRRHHAETLIVPMSLIRDAYRVEI
                     LGGLADAGEEVLHVFLEVDAGVLRERLNARVTHRGSEWDQAARELGMTGLDEIVAAAA
                     RQPAGTLVLRSDRLTPAELADEVLAGTELRQVHGDGKRAHQARSLEPEDVRSIGQEGV
                     TLSSVDT"
BASE COUNT          243 a          402 c          424 g          208 t
ORIGIN      
        1 ggagctcgaa ggcgatcacg atttctgaga tgccgcggaa cagggcgaag aagccgaccc
       61 agagcagcag cagcgctcct tgtaccgggc ggtactgctg ggaggcccag aaaccgagca
      121 agatctccag gatgccgacc agcaggccaa gccaccacat ggagttgact tccctggtgc
      181 tgacggaggt gatgatgtag aacgtgccct ggaagatgag cagcagccct aggatcgagg
      241 cgagcgccca gaacgcgttg tagggccggg cgaatgacca gccggcgccg aaggcgaaga
      301 tgatgcccat cacgatgtgc agccagcgcc agccgggcat gaccgaggcg atgaagaact
      361 cgttgatcgt ggccaccagg aagtagacgc ccagcaggac gcccactgtg gggatcgagg
      421 cggggttgaa ccgcagtgca atccacgcga ggatgagcca cgcgacgccg gtcagcagga
      481 acatccacca ggggccggcc aggcgcgcta gccctgcgcg ggtcctggag ctgatatctg
      541 tgcgttcgtc catggcgctc atgagcagct tcctttccgg caggtggcta cctggatatg
      601 gggaccgtct gcccgatgtt tacccggttc ctgggattat gaagccggtc gggaacaggc
      661 atcacgccaa gtggcgtcac cgtttgttta tagcgaaaca gccgaggtcc gtgggtgagc
      721 cgtagccctt cgggatcgct gggcctttaa cgtcaaagtg gactattccc tgtcaggtat
      781 ccactgacga taaagtaacg ccctcctggc caatcgagcg gacgtcttct ggctccagcg
      841 atcttgcctg gtgcgcccgc ttgccgtctc cgtgaacctg acgcaattcg gtcccggcca
      901 gcacctcgtc ggcaagctcg gccggggtga gcctgtcaga gcgcagcacg agcgtcccgg
      961 ccggctggcg ggcagcggca gcgactatct catccaagcc ggtcatgccg agctcgcggg
     1021 ctgcctggtc ccactcgctg ccgcggtgag tcactcgggc attgagccgc tcccggagca
     1081 cgccggcgtc cacctccagg aacacgtgca ggacctcctc acccgcgtcg gccaggccgc
     1141 cgaggatctc gacccggtag gcgtcgcgga tcagcgacat cgggacgatg agcgtctccg
     1201 cgtggtgtct gcgcagcgac agcgccgtcg cgacgaccag ttcccgccag ctcggcaggt
     1261 gctggaaatc gccgttg
//
LOCUS       DASRPQ010000175         1269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4405470, whole genome shotgun sequence.
ACCESSION   DASRPQ010000175 DASRPQ010000000
VERSION     DASRPQ010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4405470"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="VFD73_02015"
     CDS             <1..188
                     /locus_tag="VFD73_02015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72807.1"
                     /translation="GEELARRYPGIPLVWISGHPRDVEFPRDTPGYEHPFLMKPVSPE
                     ALLETVSRTLQSTATSS"
     gene            197..754
                     /locus_tag="VFD73_02020"
     CDS             197..754
                     /locus_tag="VFD73_02020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72808.1"
                     /translation="MNARAEGATVSRHQLRGITVRVINSRPDIATRAVLERLDQALEL
                     IALYAPRRFRRMTQDLSGIVVQRFPCRGAFFPQTRECLVELTFTVNPAHTLPEIAASI
                     VHEATHARIAARCGTLPEALRPREERICRRAELEFGTALPDGEVVVERARRSLGLSDL
                     EVAPQVDWREAARRVESIDRQQLPG"
     gene            complement(765..>1269)
                     /locus_tag="VFD73_02025"
     CDS             complement(765..>1269)
                     /locus_tag="VFD73_02025"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI72809.1"
                     /translation="GQYYDYVKVLDFGLVKNEGADPLIDPRLTAPNVVAGTPAYLSPE
                     SALGEPVDRRTDIYALGCVAYWMLTGRYVFQEQGAVQMLARHIHTPPDPPSLYSLFRI
                     PPELDEIVLACLAKAPEDRPASARELADRLAGCEVDERWSRDHARLWWESRVQPEPAL
                     ALNDGAW"
BASE COUNT          245 a          418 c          387 g          219 t
ORIGIN      
        1 ttggcgagga actggcccgg cggtatcccg gaattccact ggtatggata tcggggcacc
       61 ccagggatgt ggaattcccc cgggacacgc cgggatacga gcatccgttc ctgatgaaac
      121 ccgtctcacc cgaggcactg ctcgaaaccg tgagccgaac cctgcagagc accgcaacct
      181 cctcctaagc gctgcaatga acgctcgcgc ggaaggggca acggtcagca ggcatcagct
      241 gcgcgggatt actgtccggg tgatcaactc tcgaccagac attgctacca gggcggtgct
      301 cgagcggttg gaccaggcgc tcgagctgat cgcgttgtac gctccgcgcc ggtttcgccg
      361 gatgacccaa gatctcagcg gaattgtcgt gcagcggttt ccctgtcggg gagccttctt
      421 tcctcagacc cgcgagtgcc tggtcgagct cacctttacc gtgaaccctg cccacactct
      481 acccgagatc gccgcatcca tcgtccacga agccacccac gcgcgaattg ccgcccgctg
      541 cggcacgctg ccggaagcgc tccgcccgcg agaagagcgt atctgccgtc gggccgagct
      601 cgagttcggc acggccctac ctgacgggga ggttgtggtt gagcgggctc gccggtcact
      661 cggactgagt gacttggagg tcgctcccca agtcgattgg cgtgaggcgg cacgccgggt
      721 ggaatcgatc gatcgccagc aacttcctgg ataggccgcc gagatcacca ggctccatca
      781 ttgagggcaa gagcaggctc cggctgaacc cgggactccc accagagacg ggcatgatcc
      841 cggctccaac gctcgtccac ttcacaccca gccaaccgat ctgccagctc ccgcgcactg
      901 gcgggacggt cctcaggtgc cttggccaga cacgccagca cgatttcatc cagctccggc
      961 ggaattcgga acaagctata cagcgacgga ggatccggag gcgtgtggat gtgccgagcc
     1021 agcatttgaa ctgctccctg ttcctggaac acatagcgac cagtgagcat ccagtaggcc
     1081 acgcacccga gagcatagat atcggttctc cgatcgaccg gctcgccgag cgcgctctcg
     1141 ggcgagagat aagccggggt cccggccacc acgttgggag cggtgagccg agggtcgatc
     1201 agcggatcgg caccctcgtt tttgaccagg ccgaaatcca ggactttcac atagtcgtag
     1261 tactgccca
//
LOCUS       DASRPQ010000176         2498 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_644760, whole genome shotgun sequence.
ACCESSION   DASRPQ010000176 DASRPQ010000000
VERSION     DASRPQ010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2498
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_644760"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1019
                     /locus_tag="VFD73_02030"
     CDS             <1..1019
                     /locus_tag="VFD73_02030"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HZI72810.1"
                     /translation="TAVLKQELSYYRSRAAHDVSTAGILGRSPAMLDVLERVRQVAAL
                     SEMPPVLITGETGTGKGLVARTLHSAGPRATKPFIDINCTALPASLMEAELFGYERGA
                     FTDAKESKLGLFEAAEGGFLFLDEIGDLELSLQGKLLRAIEERMVRRVGGIRDRRIDV
                     RIVAATNRDLEQEVQRNQFRGDLYFRLAVILLHLPPLRERGDDILLLADQFLQRFSGK
                     YGKEVHGMDQSARDALLAYPWPGNVRELSHVMERAVLWTRQPMLSAEHLALPVVTRAA
                     PAADTSIGTDEMPDGDLSQWERSIIERAMRESGGNQTRAAQRLGITRDTLRYRLKKFG
                     IQGG"
     gene            1338..2246
                     /gene="pqqB"
                     /locus_tag="VFD73_02035"
     CDS             1338..2246
                     /gene="pqqB"
                     /locus_tag="VFD73_02035"
                     /inference="COORDINATES: protein motif:HMM:NF003523.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqB"
                     /protein_id="HZI72811.1"
                     /translation="MQVVLLGTAAGGGFPQWNCWCPVCRVGRTNPGRAHSRSQSSAAI
                     SADGERWFLLNASPDVREQLACLPGPLPTGIRHVPVEGIVTTDAELDHTLGLVLLREA
                     RALQLYATASVRDILERYSNILPVTGAFAEVTVTETCLQRRSELRYRDGTLSGIAVTP
                     FPVPADPPRFAPDAGPGHTVGLIVEDEMTGGRMAFVPGCGELDSELMAQLQDTDLLLF
                     DGTFWSDDELVTLGISERRAREMDHLPIWGKGGSLSWLSSLERPQTVYTHINNTNPIL
                     LEDSSERAEVEQRGLKVGSDGMSFSI"
     gene            2249..>2498
                     /locus_tag="VFD73_02040"
     CDS             2249..>2498
                     /locus_tag="VFD73_02040"
                     /inference="COORDINATES: protein motif:HMM:NF015057.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72812.1"
                     /translation="MTIALSPSALAAPPRPPFPELHQPLSSDALADAMRSFSTSYYAK
                     HPFHQLMHEGRLTARQLQGWVANRLAYQRAIPRKDAAII"
BASE COUNT          464 a          771 c          788 g          475 t
ORIGIN      
        1 agacggcggt gctcaagcag gagctgtcgt actatcgaag ccgtgccgcg cacgatgtct
       61 cgaccgccgg catcctgggt cgttcacccg ccatgctgga tgttctcgag cgggttcgcc
      121 aggtggcggc tctttccgag atgccgccgg tgcttatcac gggtgagacc ggaaccggca
      181 aagggctggt ggcacgaacc cttcattccg cgggcccgcg ggcgaccaag ccgtttatcg
      241 atatcaactg caccgctctt cccgccagcc tcatggaagc cgagctcttc gggtacgaac
      301 gaggagcgtt tactgatgcc aaggagtcga agctcgggct gttcgaggcg gctgaaggcg
      361 ggtttctgtt cctcgacgag atcggcgacc tggagctgtc actccaggga aagttgttgc
      421 gggccatcga agagcgcatg gtgcgacggg tcggcggcat tcgagaccgc cgcatcgatg
      481 ttcggatcgt tgccgccacc aaccgtgatc tggagcagga ggtccagcgc aatcagtttc
      541 gtggcgatct ctacttccgg cttgccgtga tcttgctcca cctcccgccg ctgcgcgagc
      601 ggggcgacga catcctgctg ctggccgacc agtttctcca acggttcagc gggaagtacg
      661 gcaaggaggt ccacgggatg gaccagagtg cgcgcgatgc gctgctggcc tatccctggc
      721 ccggcaacgt gcgggagctg agtcatgtga tggaacgcgc cgtcctctgg acccggcaac
      781 cgatgctctc ggcggagcac cttgccctcc cggtcgtcac ccgagcggct ccggcagcgg
      841 acacttcgat cggaaccgac gagatgccgg acggagatct gagccagtgg gagcgatcga
      901 tcatcgagcg ggcgatgcgt gagtccggcg gcaaccagac cagagcggct caacgactgg
      961 gtatcacacg ggatactctg cggtatcggc tgaagaagtt tggcatccag ggtgggtgaa
     1021 gaaacccacc ggatggttag atgacccagg caaatgacgc aacgagacgc gaccgccgcc
     1081 cgggttgatt cataacgctc ccgataacag ggacttacgg ccgatgagtt tttaccatgg
     1141 aagtggcacg gtgcctgctc ctggtccggc cgtgggtact cgagaccttc ttaccacttt
     1201 tgggagtaca tcatgtcctg gaccaagccc caagccgaag ttgttgccgt gaccatggaa
     1261 gtcaccgctt acgttgccac gctgtaacca gcactgaccg gagggctcgc gaaagcgagc
     1321 ccttcagctt tccccctttg caagtcgttc ttcttggcac tgcggccggt ggagggttcc
     1381 cgcagtggaa ttgctggtgc ccggtgtgcc gcgttggccg aaccaatccc ggacgagccc
     1441 attcccgtag tcagtcatcc gccgcgatca gcgccgacgg ggaacgctgg tttctgctca
     1501 acgcctcacc cgatgtgagg gagcagctgg cctgccttcc aggaccgttg cccacaggta
     1561 tccggcacgt tccggtggaa ggcatcgtga ccaccgatgc cgagctcgac cacacgctgg
     1621 gcttggtgct gctgagggag gcccgggcgc ttcagctgta cgcaaccgct tccgtccggg
     1681 acattctgga acgctattcg aatattctgc cggtcaccgg cgcgttcgca gaagtcacgg
     1741 tgaccgagac ctgccttcag cggcggagtg agctcaggta tcgggacgga acattgagcg
     1801 gaatcgcggt cacaccattt ccagtaccgg ctgaccctcc gcgatttgct ccggacgcgg
     1861 gacccggtca tacggtggga ctgatcgtcg aagacgagat gaccggtggg cgcatggcat
     1921 tcgtgccggg ctgtggggag ctcgattccg agctcatggc tcagcttcag gatacagacc
     1981 tcttgctgtt cgacggtacc ttctggagcg acgacgaact ggtgacgctt ggaatcagcg
     2041 agcgccgcgc tcgggaaatg gatcatttgc cgatctgggg caaaggaggg agcctgtcct
     2101 ggctcagctc gctggagcga ccgcaaaccg tctataccca catcaacaac accaacccca
     2161 ttctgctgga ggattcttcc gagagagccg aagtcgagca acgcggcctc aaggtgggat
     2221 ccgacggcat gagcttcagc atttgaacat gaccatcgcc ctgagcccct ccgcgctggc
     2281 ggcgccgcct cgaccgccgt ttcccgagct ccatcagccg ctttcttctg atgccctggc
     2341 ggatgcgatg cgatcgttca gtacgtccta ttacgcaaag catccctttc accagctcat
     2401 gcacgagggc aggctgacgg cacggcagct ccaggggtgg gtggcaaatc ggctggccta
     2461 ccagcgcgcc attccccgga aagacgcggc catcatct
//
LOCUS       DASRPQ010000177         1001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4092172, whole genome shotgun sequence.
ACCESSION   DASRPQ010000177 DASRPQ010000000
VERSION     DASRPQ010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4092172"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..391
                     /locus_tag="VFD73_02045"
     CDS             <1..391
                     /locus_tag="VFD73_02045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZI72813.1"
                     /translation="GNELITLVTNITDPDEIAAIEMAAAYHERWEAELVIDELKTHQR
                     GSGVILRSRKPEMVEQEIWGLLLTHYGIRHLMREAADQAGLDPDRMSFIRALRVVRRQ
                     VSGQAAFPPSAADVSGTGGDPGNPGTA"
     gene            545..745
                     /locus_tag="VFD73_02050"
                     /pseudo
     CDS             545..745
                     /locus_tag="VFD73_02050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611990.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
     gene            complement(785..>1001)
                     /locus_tag="VFD73_02055"
     CDS             complement(785..>1001)
                     /locus_tag="VFD73_02055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72814.1"
                     /translation="EAFAALGPVDGPDVRGMPDGRLLHLRDTYPAETAWAPQWVGDEL
                     RQVRASAWNTRLAGIRAASEAASAQLK"
BASE COUNT          198 a          316 c          319 g          168 t
ORIGIN      
        1 cggaaatgag cttatcacgc tggttaccaa tatcaccgat cctgacgaga tcgctgcgat
       61 cgagatggcc gctgcctatc atgagcgctg ggaggccgaa ctcgttattg acgagctcaa
      121 gacgcaccag cgcgggtccg gggtgatcct ccgctccagg aagcccgaga tggtcgaaca
      181 ggaaatctgg ggcttgctgc taacccacta cggaatacgg cacctaatgc gagaagccgc
      241 cgaccaggcc ggtctggacc ccgacaggat gtccttcatc cgcgccctcc gtgtcgtccg
      301 ccgccaggtc tccggccagg cggcttttcc cccctcggcg gctgatgtca gcggaacggg
      361 aggcgatcca ggaaatcctg gaacggcctg acccagtccg ccgggagcgg tcctgcccgc
      421 ataaagtaaa gagagcccgg cccaactctt atttcgtgaa gcaacccgga gataagaata
      481 ttgtgtacag ttcaccgccg acgatacggc tgctccatcc cgccgcttaa ttgaacggca
      541 ttgtgccctg gcggaatcgg tcaacgggac gctgaaggtc gagctcgttt accgcaccgt
      601 ctatcccacc cgcgagaagg cacgggaaga cattgcgcgg tggatcgagc ttcgctataa
      661 tcagactcgt ctccactcgg gactcggtta caggactccg caagaagtca tggacgagta
      721 cctgaatggg caggaagccg cgtgaattaa ccgcaaattc cctgtccgga aaacgcggag
      781 cagctcactt gagctgtgcg gacgcagcct cggatgcggc gcggatgccg gccaggcggg
      841 tgttccaggc gctggcgcgg acctgccgga gctcgtcccc gacccactgc ggtgcccagg
      901 cggtctcggc gggataggtg tcgcgcaggt gcagcagccg cccgtcgggc atgccgcgga
      961 cgtcgggccc gtcgaccggg ccgagggcgg cgaaggcctc g
//
LOCUS       DASRPQ010000178         1549 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1905022, whole genome shotgun sequence.
ACCESSION   DASRPQ010000178 DASRPQ010000000
VERSION     DASRPQ010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1549
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1905022"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..483
                     /locus_tag="VFD73_02060"
     CDS             <1..483
                     /locus_tag="VFD73_02060"
                     /inference="COORDINATES: protein motif:HMM:NF024685.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIR2 family protein"
                     /protein_id="HZI72815.1"
                     /translation="VKSFDWDKDRPESRPLAVTADDPDNPVVFRLFGNFDDIDSIVLT
                     EDDYFQYLTNWTLSRSFLRGLSSKLTNANLLLLGFGLDDWDFRVLFRSIQAMGGAVNM
                     DRLAHVAVQLNPESETFEPEAVQQYLEDYLGRSNFSIHWGTSAEFLRDLSERWQLSRG
                     "
     gene            462..>1549
                     /locus_tag="VFD73_02065"
     CDS             462..>1549
                     /locus_tag="VFD73_02065"
                     /inference="COORDINATES: protein motif:HMM:NF044287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI72816.1"
                     /translation="MAAVPRLTEKEAFRRGAETNPYVGPRAFREQDRLYGREQELAEL
                     VDLVVAERVVLMYSPSGAGKTSLIQASLIPELRRQRFRPLPPARVNLPKQADTEINQY
                     EMSVMLSLESQLRLPHTQQSAEQLSTIHLPEYLRAEANRKPPLAEGVPLVLIIDQFEE
                     ILLLDPGDQSGQSAFFRQLGDALDKQRLWVLLSMREEYLGGLDKFSYELPTSLNVRYR
                     LDLLTRPAAKSAIQSPPEKDHDVTVCDAAVDLLVKNLSTIIVQRPGNSASREESPYVE
                     GVLLQTVCRQIWDEIDPLRNGIKTIKPEDLGDLQNVDRALAKYYSDAVARAARSAKLS
                     QRLIRDWFEDVLITQHGFRSQTESGPGE"
BASE COUNT          312 a          489 c          481 g          267 t
ORIGIN      
        1 gtgaagagct tcgactggga caaggaccgg cccgaatccc gtccgctcgc ggtgaccgca
       61 gacgacccgg ataatcccgt ggtgttccgg ctgttcggca acttcgacga catcgattcc
      121 atcgtgctga ccgaagacga ctacttccag tacctgacga actggacgct gtctcgcagt
      181 ttcttgagag gcctgtcgag caagctgacc aatgccaacc tcctgttgct cgggttcggc
      241 ctcgatgact gggatttccg ggtgctgttc cggagcatcc aggcgatggg gggcgcggtc
      301 aacatggaca ggctggcaca cgtcgcggtt cagctcaacc cggagagcga gaccttcgag
      361 ccggaggccg tccagcagta tctcgaggac tacctcggca gatcgaactt ctcgatccac
      421 tggggcacct cggccgagtt cctgagggat ctgagtgagc gatggcagct gtcccgcggc
      481 taaccgagaa ggaagccttc cggcggggtg ccgagaccaa cccctacgta ggaccgcgag
      541 cattccggga gcaagatcgc ctgtacggcc gtgagcaaga gctggccgaa ctggtcgacc
      601 ttgtggtggc agagcgggtt gtactgatgt actcgccgtc cggcgccggg aagacctccc
      661 tgatccaggc ctctctcata cctgagctcc gccgtcagcg cttccgcccg ctgccgccgg
      721 cccgggtaaa cctgcctaag caggcagaca cggagatcaa tcaatacgaa atgagcgtca
      781 tgctctccct ggagagccag ctccggcttc cccatacgca gcagtcggcg gaacagctgt
      841 ccacgatcca cttgccggag tacctgcgcg ccgaggccaa ccgcaagccg cctctggccg
      901 aaggcgtgcc gctggtcctc atcatcgatc agttcgagga gatcctgctg ctcgatccgg
      961 gcgaccagag cgggcaaagc gccttcttca ggcaactcgg cgatgcgctc gacaagcagc
     1021 gcctgtgggt gctcctctcg atgcgcgagg agtatctcgg cggactggac aagttctcct
     1081 acgagctgcc cacgtcactc aatgtcaggt accggctgga tctgctcacc cggccagccg
     1141 ccaagagcgc gatccagagc cctcccgaaa aggaccatga tgtcactgtc tgcgacgcgg
     1201 cggtggacct gctcgtcaag aatctgtcca ccatcatcgt gcaacgcccg ggcaattccg
     1261 ccagccgaga ggagagccca tatgtcgaag gcgtgctgct gcagaccgta tgcaggcaga
     1321 tctgggacga gatagatccg ctccgtaacg gcataaaaac catcaagcca gaggatctgg
     1381 gggatctgca gaacgtcgac cgggccctgg cgaagtatta ctcggacgcg gtcgcacggg
     1441 cggcgcggag cgccaagttg agccagcgat tgatcaggga ctggttcgaa gatgtcctga
     1501 tcacgcagca cggattccgc agccagaccg aatccgggcc gggcgagga
//
LOCUS       DASRPQ010000179         1323 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2535578, whole genome shotgun sequence.
ACCESSION   DASRPQ010000179 DASRPQ010000000
VERSION     DASRPQ010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2535578"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            66..890
                     /locus_tag="VFD73_02070"
     CDS             66..890
                     /locus_tag="VFD73_02070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72817.1"
                     /translation="MNEGPTARIDRTALERIIRRAAELQTAEREAGETLSSDELIAVG
                     REVGIPVRHLQQAILEERTRIGGGSGFLDRAAGPGEIAAQRVVSVDADEVERCLIQWM
                     ERNELLCIQRQQPGRITWEPLGGFQAAVRRSAAALGSGKRPFMLSRASTVTATTLPLE
                     PGYAHVALVADVRKVRAEYLAGGSAVAGAGAASTAAMIALGALLPVAILPLPVAMGVG
                     YAMLRRYRPTVSRILLGLERALDSLEQGRSKAPRQLLERPGLLNLLTDELRKALKP"
     gene            887..>1323
                     /locus_tag="VFD73_02075"
     CDS             887..>1323
                     /locus_tag="VFD73_02075"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HZI72818.1"
                     /translation="MSINKVGVLGCGLMGSGIAQTSAAAGFSTVARDVSEPLLEKGRA
                     GILKSLGKLVEKGKLDQKSREAAVGKLAFTTDLGALRDCDIIIEAVTEDLELKNELFR
                     ELDRLCPPKTIFASNTSSLTIAAMAAATGRADRFVGLHFFNPVP"
BASE COUNT          228 a          429 c          436 g          230 t
ORIGIN      
        1 tgacatttcc tctctcatgt ctcagctcag gattcaggcg gcccagactc cctccaagga
       61 ataggatgaa cgagggtcca acagcccgga tcgaccggac cgcgctcgag cggatcatcc
      121 ggcgggccgc cgagctgcag accgccgagc gcgaagccgg cgaaaccctc agctcggacg
      181 agctgatcgc ggtcggccgt gaggtgggca tcccggtccg acacctccag caggcaattt
      241 tggaggagcg cacccggatc ggcggcggat cgggatttct cgaccgcgcg gctggtcccg
      301 gtgagatcgc cgcccagcgg gtggtgtcgg tggatgccga tgaggtggag cggtgcctca
      361 tccagtggat ggaacgcaat gagctgctct gcatccaacg ccagcagccc ggcagaatca
      421 cctgggaacc gctcggcggg ttccaggcgg ccgtacgccg atccgcagct gccctcgggt
      481 ccggcaagcg gccgttcatg ctctcgcgcg ctagcacggt cacggccacc accctccctc
      541 tggaacccgg gtatgctcac gtggccctcg tcgccgacgt gagaaaggtt cgcgcggagt
      601 atctcgctgg tggctctgcg gtggcgggcg ctggcgcggc aagcaccgca gccatgattg
      661 ccctgggcgc gttgctgccg gttgcaatcc tgccgcttcc ggtcgcgatg ggcgtggggt
      721 acgccatgtt gcggcgctat cgaccgactg tctcccgtat cctgctggga cttgagcgcg
      781 cgctcgactc gttggagcag ggacgcagca aggcgccgcg ccagcttctg gagcggcctg
      841 gcctgttgaa tttgcttacg gatgagctcc gcaaggcgct gaagccgtga gcatcaacaa
      901 agtcggtgtg ctcggctgcg gcctgatggg aagcggcata gcccagacct cggcagcggc
      961 cggcttcagc accgtggcgc gggacgtctc cgagccgctc ctggagaagg gccgggccgg
     1021 aattctcaaa tcgctcggca agctcgttga aaaggggaag ctcgaccaga aaagccggga
     1081 agccgcagta ggaaagctcg ccttcactac cgaccttggt gctttacgcg actgcgacat
     1141 catcatcgaa gcggtcacgg aagatcttga gctcaagaac gagctcttcc gggagctcga
     1201 ccggctgtgt ccgcccaaga cgatctttgc ctccaacacc tcgagtctga ccattgccgc
     1261 tatggcggcg gccaccgggc gcgccgaccg tttcgtagga cttcacttct tcaatccggt
     1321 ccc
//
LOCUS       DASRPQ010000180         1554 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3465619, whole genome shotgun sequence.
ACCESSION   DASRPQ010000180 DASRPQ010000000
VERSION     DASRPQ010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3465619"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1093
                     /locus_tag="VFD73_02080"
     CDS             <1..1093
                     /locus_tag="VFD73_02080"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF006006.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HZI72819.1"
                     /translation="SGWSARGGQCRNPYALDRNPCGSSSGSAVAVSANLGAIAVGTET
                     DGSIVCPASTTGIVGIKPTVGLVSRAGIIPISHTQDTAGPLCRSVADAAVLMTVMAGA
                     DPRDPATSTSPRHLRDYTKLLDPAGLRGARIGVARAKFFGYSDRTDRLADEALALLRH
                     EGAVLIDPADVPHAGEYDDAELDVLLYEFKADLARYLEQLGPKAPVKKLQDVIAFNEQ
                     HREQEMPYFGQELFLRAQKNGTLASPGYAKALHKCRRLSRDLGIDAVMAKHRLDALVA
                     PTGNPAWPTDLVNGDHFTGGSSTPAAVAGYPSVSVPMGFAFGLPVNLSFFGRAWSEPT
                     LIKLAYAYEQASKHRKAPDFAASVTLPPA"
     gene            1154..>1554
                     /locus_tag="VFD73_02085"
     CDS             1154..>1554
                     /locus_tag="VFD73_02085"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HZI72820.1"
                     /translation="MAVTSPLASGSAKLPPGLSRDQLLELYYYMRLTRSLEERLVNLY
                     RQTKVVGGLFRSLGQEADAVGSAYALDRSKGDVLSPLIRNLGSMLVQGATPLEILRQY
                     MAKGDSPTRGRELNIHFGDTGRGFIGQISHLG"
BASE COUNT          271 a          512 c          486 g          285 t
ORIGIN      
        1 cagcgggtgg agcgctcgtg gtggccagtg ccgcaatcct tatgcgctgg accggaaccc
       61 ctgtggctcg agctccggat cagcggtcgc ggtctccgcc aaccttggtg cgatcgccgt
      121 ggggaccgaa accgacggat ccatcgtctg tcccgcatcc accaccggga tcgtcgggat
      181 caagccgacc gttggactgg tgagccgggc cgggatcatt ccgatctcgc acacccagga
      241 caccgcgggg ccgctctgcc ggagcgtggc ggatgctgct gttctcatga cggtgatggc
      301 gggcgctgac ccgcgcgatc cggcgacctc gacctcgccc cggcacctgc gcgactacac
      361 gaagctgctc gatcccgcag gcctccgcgg ggcacgcatc ggggtggcgc gggcaaagtt
      421 cttcggctac agcgatcgga ccgaccggct cgccgacgaa gcgctggccc tgctccggca
      481 cgagggtgcg gtgctcatcg atcccgccga tgtgccgcat gcaggcgaat acgatgatgc
      541 cgagctggat gtgctgctct atgaattcaa agccgacctg gctcgatatc tggagcagct
      601 cggccccaag gcgccggtca agaagctgca ggatgtgatc gccttcaacg agcagcatcg
      661 cgagcaggag atgccgtatt tcggccagga actctttctc cgggcccaga agaacggcac
      721 gctcgcttca cccggctacg cgaaagcgct ccacaagtgc cggcgcttgt cgcgtgatct
      781 gggaatcgac gcggtcatgg ccaagcaccg gttggatgcg ctggtggcgc ccaccggaaa
      841 tcctgcctgg ccgaccgatc tggtgaacgg cgatcacttc accggcggaa gctccacgcc
      901 ggccgcggtc gccggctatc ccagcgtcag tgttccgatg gggttcgcct ttggactgcc
      961 ggtcaactta tcgttctttg gacgcgcgtg gagcgagccg acgctgatca aattggcata
     1021 cgcgtacgag caggcgtcca aacaccgcaa agcaccggat tttgccgcca gtgtaacgct
     1081 ccctccggct tgattctctt cttcgggcgg tcgatcttcc tgcccggaac cgcaccttca
     1141 gaccaggacc agcatggcag tcaccagccc tctcgcttcc gggtcggcca agcttccgcc
     1201 cggcctcagc cgcgatcaac tgctcgagct gtactattac atgcggctga cgcgctcgct
     1261 ggaggagcgg ctggtcaatc tgtatcgtca gaccaaggtg gtcggcggac tcttccgctc
     1321 gttggggcag gaagccgatg cagtaggatc cgcctacgca ctggatcgct ccaagggcga
     1381 tgtcctctct ccgctgattc gaaatctcgg ctccatgctg gtccagggag cgaccccgct
     1441 ggaaattctg cgacaataca tggccaaggg cgactctcct acgagaggcc gggagctcaa
     1501 tatccatttc ggagacactg gccgaggctt catcggccag atctcccatc tggg
//
LOCUS       DASRPQ010000181         1671 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_957605, whole genome shotgun sequence.
ACCESSION   DASRPQ010000181 DASRPQ010000000
VERSION     DASRPQ010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_957605"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(162..491)
                     /locus_tag="VFD73_02090"
     CDS             complement(162..491)
                     /locus_tag="VFD73_02090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72821.1"
                     /translation="MSSRNVGAVALVILLGLVIGTLGLVEADLYAVGVLLLFLGGVGA
                     AVLMGAYLIRYFSAKRHALAAAGPSITYGQLGERAELEGQFQGQNGACRRWFGLPPLT
                     CACVLPG"
     gene            614..>1671
                     /locus_tag="VFD73_02095"
     CDS             614..>1671
                     /locus_tag="VFD73_02095"
                     /inference="COORDINATES: protein motif:HMM:NF013791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HZI72822.1"
                     /translation="MGALAHVLAADPIPARSQMGSSLGFHIILACFGVAFAAVTMTAE
                     WIGIKRGDAAALLLARRWSKVMAVLVAVGAVSGTVLSYELGLLWPGLMGRFGAAYGVG
                     FSIEGIFFFLEAIFVGVYLYGWNRLSPWAHWWSGMPIVVSGVLGAMSVVAMNSWMNSP
                     AGFTLSNGKITSVSPVSVFFNASTPYQTAHMVLAAYMVTGFVTAGVYAVGLLRGRRDR
                     YHRLGFAIPFTIAGIFAPLQVMMGDIIARFIAHNQPIKFAAMEYVSTTGNNVPEWLGG
                     ILINGNIYFGLSIPSFDSILVGFNPHTVVIGWDSVPPDQRPPLATLIHLSFDLMVGLG
                     FFLFALAAWQGWWWWFHRR"
BASE COUNT          272 a          539 c          542 g          318 t
ORIGIN      
        1 ccagccgcct ggtgagccca cgatcggccc gatcggccgc ctgcgccgcc agccacgccg
       61 ggaagctgca ctctttcatt gctgcatcca ctggaaaggg atccgtggac cttctccctt
      121 ccatgtcccg ccgagcggca cccgtggccc aggtacagcc cctaaccagg taatacgcaa
      181 gcacaggtta gcggaggcaa gccgaaccag cgccgacaag caccgttttg cccctggaac
      241 tgcccctcaa gttcagcacg ctcgccgagc tgcccgtacg tgatactggg gccagccgcg
      301 gctaacgcat ggcgcttcgc gctgaagtac ctgatgaggt acgcgcccat caggacagcg
      361 gcgccgacgc cgccgaggaa caggagcagc accccgacgg cgtagaggtc ggcctcaacc
      421 agcccgagtg tgccgatgac cagcccgagc aggatgacca gggccaccgc tccaacgttt
      481 ctgctgctca taggtccgac acctctggga taacgttggc ggctgctcca acgtgtaccc
      541 ggagtgcgat ggcggtacac atagcgtggt ggctttgcag gcgcaacacg ggtatccagc
      601 tgacgggagc gcaatgggcg cactggcaca cgttctggcc gcggatccga tcccggcccg
      661 atcgcagatg gggtcatcgc tggggttcca catcatcctc gcgtgctttg gcgtcgcgtt
      721 cgcggccgtc accatgaccg cggagtggat cgggatcaag cgcggcgatg ccgccgcgct
      781 gctactggca cgccgctggt cgaaggtcat ggcggtgctg gtggcggtcg gcgcggtgtc
      841 ggggaccgtg ctgtcgtatg agctgggcct gctgtggcct ggtctgatgg gccggttcgg
      901 tgcggcgtac ggcgtggggt tctcgatcga aggaatcttc ttcttcctgg aagcgatctt
      961 cgtaggggtc tacctgtacg ggtggaaccg gctgtccccc tgggcgcact ggtggagcgg
     1021 gatgccaatc gtggtatccg gggtgctggg tgccatgtcg gtggtcgcga tgaactcgtg
     1081 gatgaactca ccggccgggt tcacacttag caatggcaag atcaccagcg tcagcccggt
     1141 atcggtgttt ttcaacgcct cgactccgta tcagaccgcg cacatggtgc tcgccgcgta
     1201 tatggtgacg ggattcgtca ccgccggtgt ctacgcggtg gggctactgc gcggccgccg
     1261 ggaccgctac caccggctgg gcttcgccat cccgttcacg atagccggga tcttcgcccc
     1321 cctgcaggta atgatggggg acatcattgc ccggttcatc gcgcacaacc agccgatcaa
     1381 gttcgctgcg atggaatatg tctccacgac cgggaacaat gttcccgaat ggctgggcgg
     1441 gatcctgatc aacggcaaca tctacttcgg tctctccatc ccgtcgttcg actcgatcct
     1501 ggtcggattc aacccgcaca ccgtggtcat cggctgggac agcgtgcccc cggaccagcg
     1561 gccgccgctg gccacgctca tccacctgag cttcgacctg atggtgggcc tcggcttctt
     1621 cctattcgcg ctggcggcgt ggcaaggctg gtggtggtgg ttccatcgcc g
//
LOCUS       DASRPQ010000182         2112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2838769, whole genome shotgun sequence.
ACCESSION   DASRPQ010000182 DASRPQ010000000
VERSION     DASRPQ010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2838769"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..284
                     /locus_tag="VFD73_02100"
     CDS             <1..284
                     /locus_tag="VFD73_02100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72823.1"
                     /translation="GAVRLSNVNGSFFDFRADRFRGTTRECICQPPDDWGGRAIVDWA
                     RRLAGGSGFDPSARELVTVAKVLDAIYGRRPSSPTQSQNRRLQELVELG"
     gene            317..1408
                     /locus_tag="VFD73_02105"
     CDS             317..1408
                     /locus_tag="VFD73_02105"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HZI72824.1"
                     /translation="MTADTVGGVWTYALDLTRALRHRGVEVFLATMGAKASPQQQKAA
                     QAAGAAGLAESTLRLPWMEQPWQDVEVAGDWLLDIAERVQPDVIHLNEPVFGKLDWPA
                     PTVAVVHSCVLSWWENVRNAPAPAEWNRYREEMRHGLLETDEVVAPSTWMLDTVRRLY
                     EVRGGRVIPNGRDPDMFTPEAKQPFVFAAGRLWDQAKNLGALDRVAKGLEWPVYVAGE
                     SQHPAGGEHPRFKHCRTLGPLPAEDVAAWLRRASIYAFPAKYEPFGLSVLEAALAGCT
                     LVLSDLATLRELWDGAAVFVSPDEQPTLRLAIQSLIADSGLRNALAMRARRRAAELTP
                     ERMARAYLEVYTGLLAGGHRRAKEPACAS"
     gene            1396..>2112
                     /locus_tag="VFD73_02110"
     CDS             1396..>2112
                     /locus_tag="VFD73_02110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72825.1"
                     /translation="MRVVMFYHSLVSDWNHGNAHFLRGIASELQSRGHEVRIYEPESS
                     WSRENLLQEYGTQAVTSFARAYPALASTTYELATLDLDRELDGADVVLVHEWNDHALV
                     DAIGRHRAAGREYRLFFHDTHHRSVTDSASMAAYQLENYDGVLAFGEVIRQRYLREGW
                     AGRVWTWHEAADVRVFYPRSSEQTTGDLIWVGNWGDEERTAELEEFLIQPIEQLRLKA
                     RAHGVRYPPSAIERLADAGID"
BASE COUNT          372 a          641 c          717 g          382 t
ORIGIN      
        1 taggagccgt ccgcctgagc aacgtcaacg gctccttctt cgatttccga gccgatcgat
       61 ttcggggaac cacccgggaa tgcatctgcc aaccacccga tgactggggg ggccgagcca
      121 ttgtggactg ggcccgacgg ttggctggcg gaagcggttt cgacccctcg gctcgggagc
      181 tggtgacggt tgcaaaggtt ctcgacgcga tatatgggcg acggccctcg agtccgaccc
      241 agtctcagaa ccgcagactg caggaactgg tggagctcgg gtagcgatgc ggcctgctgc
      301 tcctcgccgg gtgctgatga ctgcggacac tgtcggcggg gtgtggacct atgccctcga
      361 tctcacgcga gcactccgcc atcgaggtgt ggaggtgttc ctggctacta tgggggccaa
      421 ggcgagcccg caacagcaga aagccgctca ggccgctgga gccgccggcc tggcagagag
      481 cacccttcgg ctgccctgga tggagcagcc gtggcaagat gttgaggtcg ccggagactg
      541 gctgctggat atcgccgaac gagtgcagcc ggatgtcatc catctcaatg agccggtctt
      601 tgggaagctg gactggccgg ctccgacagt cgctgtggtg cactcctgtg ttctgtcctg
      661 gtgggagaac gtgcggaacg ctccagctcc cgcagagtgg aaccgctacc gcgaggagat
      721 gcgtcacggg ttgctcgaaa ccgacgaggt agtggctccg tccacctgga tgctcgacac
      781 cgtccgccgt ctgtatgagg tgcgtggggg ccgggtgata ccaaatggcc gggaccccga
      841 catgttcacc cccgaagcga agcaaccatt cgtgttcgcg gccggtcgtc tctgggacca
      901 ggcaaagaac cttggggcgt tggatcgggt ggcgaaggga ctggaatggc cggtctatgt
      961 cgctggtgag tcgcagcatc ctgccggcgg cgaacaccca cgattcaagc attgccggac
     1021 cctcggcccg ctcccggccg aagacgtagc cgcttggctt cggcgcgcga gcatctacgc
     1081 ctttcccgcc aagtacgagc ccttcgggct gtcggtactc gaggccgcac tggcgggctg
     1141 caccctcgtg ctcagcgatc tcgccacact ccgagagctg tgggatggtg ccgctgtatt
     1201 cgtctcgccg gacgagcagc ccaccctgcg cctggccatc cagtcgttga tcgcagattc
     1261 ggggttgcga aacgctcttg cgatgcgggc acgccggcgg gcagcagagc ttaccccgga
     1321 gcgcatggcg agagcttatc tcgaggtgta taccgggcta ctcgcaggtg gtcacaggcg
     1381 cgcgaaggag ccggcatgcg cgtcgtgatg ttctaccact ctctggtgtc ggactggaac
     1441 cacggaaacg ctcacttcct tcgaggaatt gcctccgagt tgcagtcccg aggccatgag
     1501 gtacgcatct acgagccgga gagctcctgg agcagagaaa atctcctgca ggagtacggc
     1561 actcaggcgg tgacatcctt cgcccgggcg tatcctgcgc ttgcgagcac cacgtacgaa
     1621 ctggcgaccc tcgatctgga ccgggagctg gacggcgcag acgtggtgct ggtgcacgaa
     1681 tggaacgacc atgccctggt cgatgccatt ggtcggcacc gagccgcagg tcgtgagtac
     1741 cggctcttct tccacgacac gcatcaccgc tcggtcaccg attctgccag catggcggcg
     1801 taccagctgg agaattacga cggggtactg gccttcgggg aagtgatccg gcagcggtat
     1861 ctcagggagg ggtgggcggg aagagtgtgg acctggcatg aggcagccga tgtccgggtc
     1921 ttttatcccc gatcgtcgga gcaaacaact ggcgacctga tctgggtcgg gaactggggc
     1981 gacgaggagc gtaccgccga gctcgaggag ttcctgatcc agcccatcga acagctccgg
     2041 ctcaaggctc gggcgcatgg ggtacggtac ccgccgagtg cgatcgagcg gcttgccgat
     2101 gccggcatcg ac
//
LOCUS       DASRPQ010000183         1631 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1585534, whole genome shotgun sequence.
ACCESSION   DASRPQ010000183 DASRPQ010000000
VERSION     DASRPQ010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1585534"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            203..275
                     /locus_tag="VFD73_02115"
     tRNA            203..275
                     /locus_tag="VFD73_02115"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:236..238,aa:Phe,seq:gaa)
     gene            277..350
                     /locus_tag="VFD73_02120"
     tRNA            277..350
                     /locus_tag="VFD73_02120"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:309..311,aa:Gly,seq:tcc)
     gene            352..425
                     /locus_tag="VFD73_02125"
     tRNA            352..425
                     /locus_tag="VFD73_02125"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:385..387,aa:Lys,seq:ctt)
     gene            446..519
                     /locus_tag="VFD73_02130"
     tRNA            446..519
                     /locus_tag="VFD73_02130"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:480..482,aa:Gln,seq:ctg)
     gene            525..601
                     /locus_tag="VFD73_02135"
     tRNA            525..601
                     /locus_tag="VFD73_02135"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:559..561,aa:Thr,seq:cgt)
     gene            603..676
                     /locus_tag="VFD73_02140"
     tRNA            603..676
                     /locus_tag="VFD73_02140"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:637..639,aa:Leu,seq:gag)
     gene            681..753
                     /locus_tag="VFD73_02145"
     tRNA            681..753
                     /locus_tag="VFD73_02145"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:714..716,aa:Thr,seq:tgt)
     gene            759..834
                     /locus_tag="VFD73_02150"
     tRNA            759..834
                     /locus_tag="VFD73_02150"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:793..795,aa:Gln,seq:ttg)
     gene            839..915
                     /locus_tag="VFD73_02155"
     tRNA            839..915
                     /locus_tag="VFD73_02155"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:873..875,aa:Thr,seq:ggt)
     gene            917..989
                     /locus_tag="VFD73_02160"
     tRNA            917..989
                     /locus_tag="VFD73_02160"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:951..953,aa:Gly,seq:gcc)
     gene            997..1071
                     /locus_tag="VFD73_02165"
     tRNA            997..1071
                     /locus_tag="VFD73_02165"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1032..1034,aa:Leu,seq:cag)
     gene            1502..1578
                     /locus_tag="VFD73_02170"
     tRNA            1502..1578
                     /locus_tag="VFD73_02170"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1536..1538,aa:Ile,seq:gat)
BASE COUNT          272 a          490 c          564 g          305 t
ORIGIN      
        1 gggttcgatt cccgccgtct ccaccgtgct gcgcccggat ggcgcagcac atctcgggat
       61 cgaggaagac ggtaatctgc ctgattcgga ttcaggagaa acgcggttcg actccgcggg
      121 tcccgaccgg gatgtggtgt atgggtaagc gcgcctggcc tgggaccagg tagacgggtt
      181 cgagtccctg cttcccgacc acgggtctct agctgagacg gattagcgcc aggttgaaaa
      241 cccggagtag gaaggttcga taccttcggg acccgcgcgg atgtcgttca acggcaggac
      301 gccagccctc caagttgact atgggagttc gattctcctc atccgctcca ggcgccgcta
      361 gctcagcggt cagagcatcc gactcttaat cggtaaggtc cggggttcga gtccctggcg
      421 gcgcacggag tcctcgccta tttgatgggg aatggtgtaa ccaggcaaca cgcttgcccc
      481 tgaagcaaga gagtccaggt tcgagccctg gttccccagc tcatgcctct gtagctcacc
      541 tggccagagc gtcctcttcg tacggggaag gcaggcggtt cgagaccgtc cagaggctcc
      601 atgcgctcgt gccgcaacag gtagacgggc ttggttgaga gccaagctga tgcgggttca
      661 actcccgccg agcgtactgc gcccctgtag ctcggcaggc agagcggacg ccttgtaagc
      721 gtcagggcat cggttcgaag ccggtcgggg gctcttgatg ggtggtgggg aaattggcag
      781 acgcggcagg ctttgaccct gcgtcttttc caggttcgag ccctgggcac ccagctctgc
      841 cttcgtagct ctagtggtct gagcgtcgcc tcggtaaggc gaaggtcgtc cgttcgaatc
      901 ggaccggagg ctccacgtga ccgtagtgtc agcggttagc acgagacctc gccagggttt
      961 cagcaccggt tcgaatccgg tcggtcactc tcaaatgccc ttctagtcca acttggtaga
     1021 ggcgcttccc tcagaaggaa gaggttccga gttcgaatct cgggtggggc acgtagtgag
     1081 gcggggaagc acgaccgcgc aggtcggtac gtaccgcgcg gtgcgcctgt cccgggcccc
     1141 gccgctcatg gagggtgaac cggccagggt gccgggctcc gttgctaacg gatgcgcggg
     1201 tagcaccgtg gcgttcgagt cgcccgctct cctccgaggg agatgaaacc accaggtggt
     1261 ggtccccggc tggaaagcgg gtgggggtga aggccctgtg gatcgtgtcc accgtcttcc
     1321 gccatggaga gtgaacctgc caggcggcag gctccgtttc gaaaacgggt ggccgccgcg
     1381 aggcggtggg gctcaggacc tccgctctcc gctcacggat ggcgaaccgg ccgggtggcc
     1441 ggctccggct tgaacccgga agggcgcgcg agcgctgggg gtcgggacct ccgccatctg
     1501 ctggccacga cccagctggt cgacggggcc tgcctgatac gcaggtatcg cgcggttcga
     1561 ttccgcggtg gccaaccatg gcgagatagc tcagttggct cagagcgccg cgcccataac
     1621 gcggaggtcg t
//
LOCUS       DASRPQ010000184         2188 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_645545, whole genome shotgun sequence.
ACCESSION   DASRPQ010000184 DASRPQ010000000
VERSION     DASRPQ010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2188
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_645545"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..637)
                     /locus_tag="VFD73_02175"
     CDS             complement(<1..637)
                     /locus_tag="VFD73_02175"
                     /inference="COORDINATES: protein motif:HMM:TIGR01670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HZI72826.1"
                     /translation="MTLFSAAEAQRVRLLGLDVDGVLTDNGVFIGPVGTGTVELKRFD
                     IQDGLGLILLGSAGMPVVWISGRRSEATSVRAAELGVELLQVPGPRKAAAFDEVLTRR
                     GVGWEEVAFVGDDLADLPILRRVGLPIAVANAVTDVKQVATYTTSAAGGHGAVREVIE
                     ALLRARGEWPDILERYFAGGVQKRERTERTEKTEKREKMERRGSEPMKRKSG"
     gene            complement(634..1434)
                     /gene="kdsA"
                     /locus_tag="VFD73_02180"
     CDS             complement(634..1434)
                     /gene="kdsA"
                     /locus_tag="VFD73_02180"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HZI72827.1"
                     /translation="MGWSFTRAPFLIAGPCVIEPGEMLLTIGETLARLEQDLGLPVCL
                     KASFDKANRSRLAGNRGPGLEEGLRALERVRTATGLPVLTDIHESQQAAVVAEVVDVL
                     QVPAFLCRQTDLLSAAGRTGKPVNVKKGQWLQPEAMHGAVEKLRNAGASEVAVTERGT
                     FFGYGDLVVDMRNFARLRAATKAPVIFDATHSVQQPGQGELGASGGQREFIPPLLAAA
                     AAAGADGFYLETHPDPSLALSDSATQWPLERLAELVGQTLDVWGRARV"
     gene            complement(1434..>2188)
                     /locus_tag="VFD73_02185"
     CDS             complement(1434..>2188)
                     /locus_tag="VFD73_02185"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HZI72828.1"
                     /translation="GLRDAYKSVEEALNHAGIPNDTKVNIEWIASDEFTDQSAAGRLL
                     GGYDGLLIPGGFGERGIGGMVEAIRWARENDLPFFGICLGLQVAIIEFARNVCRLPDT
                     NSTEFEPNCQTPVISLMHSQRDVADLGGTMRLGAYTARLRPGSRVAQAYGTQEISERH
                     RHRWEVSNAYRDVLAEFGLRLSGQSPDGGLVEVIELPDHAWFIGCQFHPELKSRPTRP
                     HPLFAGFIAAAMRRRDAAATRAAVEELARSTR"
BASE COUNT          383 a          770 c          651 g          384 t
ORIGIN      
        1 caccactctt tcgtttcatc ggctcggagc ctcgcctctc catcttctcc ctcttctccg
       61 tcttctccgt tctctccgtc ctctccctct tctgaactcc tcccgcaaag taccgctcca
      121 gaatgtccgg ccattctccg cgggcgcgca gcagcgcttc gatgacctca cgcaccgctc
      181 catggccccc tgctgcgctc gtggtgtagg tggcgacctg cttgacgtcg gtcaccgcat
      241 tggcaaccgc aatgggcagg cccactcgcc gaaggatcgg caggtccgcc aggtcatcgc
      301 ctacgaaggc cacctcttcc cagcccacac cccggcgggt gagcacctcg tcgaaggcgg
      361 ccgccttgcg gggaccaggg acctgcagca actccacccc aagctctgct gctctgaccg
      421 aggtggcctc tgacctccgt ccgctgatcc acaccaccgg catgcctgcg cttccgagca
      481 gaatcagtcc tagtccgtcc tggatgtcga aacgcttcag ttctacggtg ccggtcccga
      541 ctggaccgat gaaaacccca ttgtcggtca gcaccccgtc cacatccaat cccagcagcc
      601 gcacccgctg ggcttccgca gcgctgaaca gcgtcatacc cgggctcggc cccaaacgtc
      661 cagcgtttgg ccgacaagct cggccaaccg ctccagtggc cactgggtag cgctgtcgct
      721 caacgctaga gacgggtcgg gatgggtctc gagatagaat ccatcggctc ctgcagcagc
      781 ggcggccgcg agcaacggtg gaatgaactc gcgttggccg ccgctggctc ccagctcacc
      841 ctgcccgggt tgctggactg aatgggtggc atcgaagatc accggcgcct tcgtggccgc
      901 acggagccgg gcgaagttgc gcatgtccac gaccagatcc ccgtagccga agaacgtccc
      961 tcgctctgtc actgctacct cggaggcgcc ggcattccgg agtttctcga cggcgccatg
     1021 cattgcctcg ggctggagcc actggccttt cttcacattc accggcttgc cggtgcgtcc
     1081 agcggcgctg aggaggtcgg tctgacggca gaggaacgcc ggaacctgta gcacgtccac
     1141 cacctcagcg accaccgcgg cctgttgcga ctcgtgaatg tcggtgagca ccggcagacc
     1201 cgtggccgta cggacccgtt ccagagcgcg cagcccctct tccaggccag gcccgcggtt
     1261 gccggcaagg cgcgaccggt tggccttgtc gaagctggcc ttgaggcaga cgggcaatcc
     1321 cagatcttgt tccagtctgg ccaacgtctc accgatcgtg agcagcatct cgccgggctc
     1381 gatgacacag ggcccggcga tgagaaaagg agctcgggtg aacgaccacc ccatcagcga
     1441 gtgctccggg cgagctcctc aacagccgca cgcgtggccg cggcgtctct gcggcgcatg
     1501 gctgcggcga tgaatccggc gaagagcgga tggggacgag tgggccgtga tttcagctcg
     1561 ggatggaact gacacccgat aaaccaggca tggtcgggaa gctcgatcac ctccaccaga
     1621 ccgccgtccg gggactggcc ggaaagccgc agaccgaatt cggcgaggac gtcgcgatac
     1681 gcgttactca cttcccaccg atgccgatgc cgctcgctga tctcctgagt gccgtaagcc
     1741 tgggccaccc gggacccggg ccgaagccgc gcggtgtacg cacccagccg catggtgccg
     1801 ccgagatccg ccacatcgcg ctgcgagtgc atgagagaga tcaccggggt ctgacagttg
     1861 ggctcgaact cggtgctgtt ggtgtcgggc aggcggcaca cgttgcgagc gaactcgatg
     1921 atcgcaacct gtaagcccag acagatcccg aaaaacggca gatcattttc ccgagcccag
     1981 cggatggcct cgaccatacc gccgattccc cgctcgccga aaccgccggg aatcagcaat
     2041 ccatcgtacc caccgagcag ccgaccggcc gcgctctgat cggtgaattc gtcactggca
     2101 atccactcga tattgacctt ggtatcgttg ggaatgccgg cgtggttcag tgcttcctcc
     2161 accgacttgt acgcgtcgcg caggccgg
//
LOCUS       DASRPQ010000185         1328 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1906685, whole genome shotgun sequence.
ACCESSION   DASRPQ010000185 DASRPQ010000000
VERSION     DASRPQ010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1328
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1906685"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..553
                     /gene="purN"
                     /locus_tag="VFD73_02190"
     CDS             <1..553
                     /gene="purN"
                     /locus_tag="VFD73_02190"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HZI72829.1"
                     /translation="IERGELPARIVLVLSNVADAPGLDRARELGLPAEAIPHRGEPSR
                     QAHEEKVIAALQAAGVEWVCLAGYMRLLSPAFVAAFPRRVVNIHPSLLPAFPGVDAQE
                     QALAHGVRISGCTVHLVDEGLDSGPIVVQRAVPVLDGDTPRTLAARILEQEHLAYPEA
                     LRRLLTEPWTIEGRRLVFGENRG"
     gene            911..>1328
                     /locus_tag="VFD73_02195"
     rRNA            911..>1328
                     /locus_tag="VFD73_02195"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          246 a          394 c          473 g          215 t
ORIGIN      
        1 catcgagcgc ggcgagttgc cggcgcggat cgtcctcgtc ctgagcaacg tggccgatgc
       61 tccggggctc gatcgggctc gggagctggg cctgcccgcc gaagccatcc cgcaccgggg
      121 cgagccgagc cgccaggcgc acgaggagaa ggtcatcgct gcgctccagg cggccggcgt
      181 cgaatgggtc tgcctggccg gttacatgcg cctcctctcg ccggccttcg tggcggcctt
      241 cccgaggcgg gtggtcaaca tccacccgag cctcctgccg gccttccccg gcgtggacgc
      301 ccaggagcag gccctggcgc acggcgtcag gatctcgggc tgcaccgtgc atctggtcga
      361 cgaggggctc gacagcgggc cgatcgtggt ccagcgggcg gtcccggtcc tcgacggcga
      421 caccccgcgg accctggcgg cgcgcatcct ggagcaggag cacctggcct atcccgaggc
      481 cctgcggcgc ctgctgaccg agccctggac cattgagggc cgcagactgg tcttcgggga
      541 aaacaggggg tagacaagcc cggcggatcg ggtatactca ccctctcgcg caagcgagtc
      601 tttgagagag cggattggcg gatagccttt ggcgggctgg caggtagccg gaataaccgc
      661 ctgggcttct tggttatacc cctttgcgcc ggggcggatg cgagcggcgg gcgaaaaagg
      721 gggttgacac ccaaaacgac ctgccctaca cttcgcctcc cctcggaaac gaggggtcgc
      781 gaaagcgagc ccctgagggg cgccggttct ttgaaaacta ggtagaggaa gagagagcag
      841 tcgggcgact gttaactttg attccgaaaa acgactgccg gagctgtagc ggcttcggtg
      901 gtgaggatct aaactggaga gtttgatcct ggctcagaat gaacgctggc ggcgtgctta
      961 acacatgcaa gtcgtgcgcg aaagcggctt cggccgctgg agagcggcga acgggtgagt
     1021 aacacgtggg tgatctgcct gggagcgggg gataacctgg ggaaactcgg gctaataccg
     1081 catacgttgg cgaggttgcg gccttgccaa gaaagctggc ctctatttat aagctagcac
     1141 tcccagagga gcccgcggct gattagctag ttggtggggt aaaggcccac caaggcgacg
     1201 atcagtagcc ggcctgagag ggtgatcggc cacactggga ctgagacacg gcccagactc
     1261 ctacgggagg cagcagtggg gaatattgga caatgggcgc aagcctgatc cagcaacgcc
     1321 gcgtggag
//
LOCUS       DASRPQ010000186         1317 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4093149, whole genome shotgun sequence.
ACCESSION   DASRPQ010000186 DASRPQ010000000
VERSION     DASRPQ010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4093149"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1135..>1317
                     /locus_tag="VFD73_02200"
     CDS             1135..>1317
                     /locus_tag="VFD73_02200"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HZI72830.1"
                     /translation="MRLALVSSKGGTGKTTSSVFLASALHLQGRTLAIDADPQGSLMA
                     WSAGGELPFTVVSMPTP"
BASE COUNT          227 a          399 c          461 g          230 t
ORIGIN      
        1 atgggttcgc cgtgtgtcag cggacgcgag agtgcaggcg cgtatacgct cagcgccgcc
       61 gtgctgtccc ggctgtcgcc gccgcgcagc gggactctaa ccgcaggtcg tacgcggcta
      121 accgcaacag caatctggcc cggcaagcgg agcgcagggc ggcccgccgt ccagacaggc
      181 gcaagccatg cgaggtgtgc gggaggctga gtctgtcact gctcggggta tgtcaggaga
      241 cgccaaggtg ccggactgag tacaaccgga gattccgggc cgccaaccgt gaatctcgcc
      301 gcgagtacaa gcgcgcggac cgggttgcga acctggagcg ggagcgagaa cgtgaccgca
      361 gaaggtacgc gggcaacccg gcccggcgtg agtatcagcg tcgggtaagg caggcggagg
      421 atccgaaggc aatagcggag cgaaaccgca ggtactacga ggccaatcgc gagaccctcc
      481 tggagtatgc gcgcgcgtac ctccgtcggc cgggccggcc atgcaggtac gcagctggcg
      541 gctgtacgga ggacgctctt cccgggtcga ggtcctgcag gaagcaccgt gtggtcggcg
      601 gcaggcggca taagttggcg tggcgggcaa gactggccgc taggcagggc atgatctgcc
      661 cttggtgtga tcgcgcattg ccgcaggatc ttgccgatac gcaggtagat cacaacattc
      721 ctgtatcgcg cggcggcgtg gatgatgctt ggaatctgca gttgctccat ggccggtgta
      781 accgggcgaa agggtctaag ctcacgcctg cagccgtcgc gctggcgctt gcacacggca
      841 ttgagcttgc tcgtggcgat tccggcttga ccggcgcgca gggcgctgag agtcctcggg
      901 agtgtcagat cccccgcgta actgtgaggc cgtgaccggg agatcctgcc tggtggcccg
      961 cagtttctca gtagcagctg accacggact tactgcatgg tcttactgca ctttatcacg
     1021 gtactgactt ctgtacctta gatactgcca gggtccgctg cccgggcttg atttctgtac
     1081 ttcaggcgcg gcggtgctgt actgaccgcc gtggctcctc tacggtgctg agccatgaga
     1141 ctcgccctgg tttccagcaa aggcggcacc gggaagacaa cgagttcggt gttcctcgcc
     1201 agcgctctgc acctgcaggg ccggacgctg gcgatcgacg ccgacccgca gggatcgctg
     1261 atggcatggt ccgcaggcgg cgagctgccc ttcacggtgg tctcgatgcc gaccccg
//
LOCUS       DASRPQ010000187         1035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_19478, whole genome shotgun sequence.
ACCESSION   DASRPQ010000187 DASRPQ010000000
VERSION     DASRPQ010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19478"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..246
                     /locus_tag="VFD73_02205"
     CDS             <1..246
                     /locus_tag="VFD73_02205"
                     /inference="COORDINATES: protein motif:HMM:NF012601.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HZI72831.1"
                     /translation="GLTICAERAAVFAAVQAGARRFRRAVVVSDTDPPAAPCGACRQV
                     LAEFGLDLKIDGVGPRNTVHWRLSELLPSAFGPEQLR"
     gene            435..>1035
                     /locus_tag="VFD73_02210"
     CDS             435..>1035
                     /locus_tag="VFD73_02210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72832.1"
                     /translation="MLVSNGGIEQRAIMRFPRRSDSVGVRDTLRAYAIDSVGLAFTVV
                     ARDTNLSGDQLEVYRLPTTIDSTTTSVQTDSAFLPQNLVVTIPIPDSVKTGVVRTLLQ
                     GPDLAKVAIAPADSGVLALGVRLIAPLATGVRLGALGSTAPAFVTYATLDVPDTGTAK
                     LRSFPLSPSFSTFLPPIQQPDDSNLLNVGGEPSARVLMRF"
BASE COUNT          156 a          339 c          326 g          214 t
ORIGIN      
        1 ggactgacca tctgcgcgga gcgcgcggcg gtgttcgcgg cagtccaggc cggagcccgc
       61 cgctttcgtc gggcggtggt ggtgtccgac accgatcccc ccgccgcccc gtgcggcgcc
      121 tgccgtcagg tgctggccga attcggcctc gacctcaaaa tcgacggtgt agggccccgg
      181 aacacagtgc attggcgctt atccgaactt ttgccctcgg cctttgggcc ggagcaactc
      241 cggtgagagt gcgcctgtgg atcggggcct ttgtccttgg aatcgcgggg tgtcaggaga
      301 agctcacggc cccgggagat tgtcctgcat tgtgtcccgg cggcgtgcct caagtgtttg
      361 aggaggtgct cgaacccatc gcgggttctg acagtagttt ccggggttac gttcaaccga
      421 gtgctgcagc cgcgatgctg gtctccaatg gaggcataga gcagcgggcc atcatgcggt
      481 ttccccgccg cagcgattcg gtcggcgtgc gcgacacgct gcgagcctat gccatcgact
      541 cggttggcct ggcctttacc gtggtggcac gggacacgaa tctgagcggc gatcaactcg
      601 aggtctatcg ccttccaacg accatcgatt ccactaccac ctcggtccag accgattcgg
      661 cgttcttgcc gcagaatctg gtcgtcacaa tcccgatccc cgactcagtg aaaaccggcg
      721 tggtgcggac gctgctgcag ggtcctgatc tggcaaaagt cgcgattgct cctgccgact
      781 ccggtgtcct ggcgctgggc gttcgtctca ttgccccact ggcgacgggc gttcgcctgg
      841 gagcgcttgg gtccacggcc cccgcgttcg tgacctatgc cacgctcgat gtgcccgata
      901 ccggtacggc caagctacgc tcattcccac tgtcgcccag cttcagcacc ttcctgcctc
      961 cgattcagca gcccgatgat tcgaacctgc tcaatgtcgg cggagagcct tcggcccgag
     1021 tgctgatgcg attcg
//
LOCUS       DASRPQ010000188         3463 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1272894, whole genome shotgun sequence.
ACCESSION   DASRPQ010000188 DASRPQ010000000
VERSION     DASRPQ010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3463
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1272894"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..849)
                     /locus_tag="VFD73_02215"
     CDS             complement(<1..849)
                     /locus_tag="VFD73_02215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72833.1"
                     /translation="MTYTFKLARRLAVSRRLNMLPVLIILAACSSNDATAPEGTPAET
                     PAGTDVSNPDLTPVKVRVTPNTVTLETNQLIQFSAHARTQSGDSVGAAVTWRASGGTI
                     LPDGRFSAAAIGTFDIIGRSRVRGQLQEDTARVKVVRRQTRVVSVEISPGSASLAPGI
                     TQQFSAIGRLANGSRVDIGVNWSATGGSIDPGGAFVAGDTAGSYRVIATNTAGTLADT
                     ASVTITAPPAPPPPPETTPPPAPAVSQLVLNPPSATLTASASKQFAAFGRTSQGDSVA
                     VAVTFSA"
     gene            1220..2407
                     /locus_tag="VFD73_02220"
     CDS             1220..2407
                     /locus_tag="VFD73_02220"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HZI72834.1"
                     /translation="MKIAFLVTRADPIGGAQIHVRDLAAELRRQGHSPTVLLSGSGPF
                     IDDLRARGIPVIVLRHLVNPIRPYRDALALREIVRTINELKPDLMTAHGAKVGILGRL
                     AARHLQLPLVVTVHGWACAPGTPRVQAAVSRGLERTIGALASKVITVSEFDRQFGLRA
                     KLVTDRRVVTVHNGMPDIPAALQADPSRSPVKLIMIARFEPQKDHGTLLRALGGLRHH
                     QWELDIVGDGPLRQDMEALASSLSIRERVHFLGQRTDVDHLLAKAQISVLASNWEGFP
                     LSILEAMRAGLPIVASNVGGVAEAVEENQTGYVVPRGDVESFRARVADLLDSAALRSR
                     LGAAGRRRYEAQFTLGRLVEKTLAVYGDALGRKRISSSSSRDLAEGPSSIEPSGADLH
                     ASS"
     gene            2502..2855
                     /locus_tag="VFD73_02225"
     CDS             2502..2855
                     /locus_tag="VFD73_02225"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI72835.1"
                     /translation="MEDEDALRASIRRLLSSGGFEVVEAQNGATALQLLERASVPKVS
                     LVLTDLRMPVMDGRQLASALARRYPSLPIVFMSGFTAQLMDLRLVSPNVAFLAKPFRE
                     AELLAMVRRQLGEAD"
     gene            complement(2862..>3463)
                     /locus_tag="VFD73_02230"
     CDS             complement(2862..>3463)
                     /locus_tag="VFD73_02230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72836.1"
                     /translation="TIGLETMPRTVDNIGFYSRIGLVPSHLTVTLVHDVSRRPAGVPE
                     LLSGAGNRWSEQLEECRRLSDRILPGVDFTRELVLTRELRIGDTTLVRDGDRLTGFAL
                     WHSTPLAAGRPKDELRVLKLVAAGPAQFDRLLQAIQLSASGERVQRVAIRCQTEFSTA
                     YLRLIELGYRVHWTDLRMLLEGFPQRTPAEGILMSNWEI"
BASE COUNT          659 a         1043 c         1088 g          673 t
ORIGIN      
        1 ggcgctaaac gtgacagcga cggcaacgct gtcaccttgt gaggtccgtc cgaacgcagc
       61 gaactgcttg ctggccgagg cagtcagggt agcgctcggc gggttcagca ccagctgtga
      121 aaccgcggga gccgggggag gagtggtctc cggcggcgga ggaggagccg gcggagcggt
      181 gatcgtcacc gaggcggtgt ccgccaaggt gccggcggtg tttgtggcaa tcacgcggta
      241 gcttcccgcg gtatccccgg ccacgaaggc cccacccgga tcaatggagc cgccggtggc
      301 gctccagttc accccaatgt ccacccgact gccgttcgcc aggcgaccaa ttgctgagaa
      361 ttgctgagtg atgccgggtg cgagggaggc acttccggga ctgatttcaa ccgacacaac
      421 acgggtctgc cgacgaacaa cctttacccg ggcggtatct tcttgcagct ggccccggac
      481 gcggcttcgg ccgatgatgt caaaggtgcc gattgcagcg gcggagaatc ggccgtcggg
      541 caggatcgtc ccccctgagg ctctccaggt taccgctgca ccgacgctat caccggactg
      601 ggtccgcgcg tgggcgctga actgaatcag ttggttggtt tcaagggtaa cggtgttggg
      661 agttacccgc acctttaccg gggttagatc tggattgctg acatctgtgc ctgctggggt
      721 ttctgctgga gtgccttccg gagcggtagc gtcgttgcta ctgcacgccg cgaggatgat
      781 caaaaccggc agcatgttca aacgtcgtga gactgccagt ctccgcgcaa gcttgaaggt
      841 gtacgtcatc gggctaccct ttcatcgatc tccttgcatg aagtcccaac cgttccccgt
      901 ccgtccaccg ccgcccttgg gctacaggta ctctagggag ttccaagctg tcgatcaata
      961 gcaagatctt tacatcagga tggtacatat gttaagctga aatcggcaac ttcttggagt
     1021 catggcaatt atacgaacac cgttcaatgc attgtaacaa atctttgact agaaacctta
     1081 cagcgagcca atcttggacg gcagccgtgc aagcccatgc acccggacgc cgattttgtc
     1141 cgcgattctg cggagctata cttccacacc actcagcgaa gcatttatcc cgcggcccac
     1201 gacttcagct gctgatgcaa tgaagatcgc ctttctggtg actcgagcag acccgattgg
     1261 cggagcccag atccacgtcc gcgatctggc agccgaactg cgacgccagg gacattcgcc
     1321 cactgtcctg ctgagtggaa gcggtccatt cattgacgat ctacgggccc gcgggattcc
     1381 agtcatcgtg cttcgtcatc tggtcaaccc catccggccc tatcgcgacg ctctggcgct
     1441 gcgggagatc gtccgcacga tcaacgagtt aaagccggac cttatgacgg cacacggggc
     1501 gaaggtcggc atcctgggac gactggctgc gcgccacctc caactgccct tggtggtaac
     1561 tgttcacggc tgggcctgcg ccccaggtac tccccgcgtt caggcagcag tgtcgcgggg
     1621 gctggagcgc actatcggtg cgcttgcaag caaagtgatt acggtctcgg agttcgatcg
     1681 ccagtttggg cttcgcgcca agctggtgac cgaccgcagg gtcgtgacgg tgcataacgg
     1741 aatgcccgac attccggccg ctttgcaagc agatccgagc cgatcgccgg ttaaactgat
     1801 catgattgcc cggttcgaac cccagaaaga tcacggcacg ttactgcgtg ccttgggtgg
     1861 gcttcgccac catcagtggg aactagacat cgtgggtgat gggccacttc gccaggacat
     1921 ggaagctctt gccagctcac tgagtatccg cgagcgggtc cacttcctgg gtcagcgcac
     1981 cgacgtggac catctcctgg cgaaagccca gatcagtgtg ctcgccagca actgggaagg
     2041 gtttcctctc agtattctgg aggcgatgcg ggccggcctt cccatcgtgg catcgaacgt
     2101 gggtggagtt gccgaggcag tcgaggagaa tcagaccggc tatgtggtgc ctcggggaga
     2161 tgtggaatca ttccgcgcga gagttgcaga ccttctcgac tcggcagcgc tccgctcgcg
     2221 gctcggcgcc gcaggtcgcc gccggtacga ggcgcagttc accctgggcc gattagtaga
     2281 gaagacgctg gcggtatacg gcgatgccct tgggcggaaa cgcatcagct catcctcgag
     2341 tcgcgacttg gcagagggtc cgagcagtat tgagccgagc ggcgctgacc ttcacgcgtc
     2401 tagctagctg acggccgacc tgattcgtga gcatgccgcg tcgtagcgca gccgggccgg
     2461 ctgagccgtc gacaccaagg tcgacccaca ccgttctcgt cgtggaagac gaggacgcgc
     2521 tccgcgccag catccgacgg ctgctctcga gtggcgggtt cgaggtggtg gaggcgcaga
     2581 acggcgcaac ggcgctgcag ctactcgaga gagcgtcggt tccgaaggtg tcactggtgc
     2641 tcactgacct gagaatgccg gtcatggatg gtcggcagct cgcctcggcg cttgcgcgcc
     2701 gctatccgag cctccccatc gtcttcatgt cagggttcac cgctcagctg atggatctca
     2761 ggctggtatc tccgaatgtg gcatttctgg ccaagccatt cagagaggca gagttgttgg
     2821 ctatggtgcg gcgacagctc ggcgaggcag actgagcagt ctcaaatttc ccagttcgac
     2881 atgagaatgc cttctgccgg ggtgcgttgg ggaaagcctt ccagcagcat gcgcagatcg
     2941 gtccagtgca cccggtagcc caactcgatg agacgaagat aggctgtgct gaactcggtc
     3001 tggcagcgga tggcaactcg ctgaacccgt tcgcctgaag ccgacagttg aattgcctgc
     3061 agtaaacggt cgaactgagc agggccggcc gccaccagct tgagcactcg gagctcatcc
     3121 ttgggacgac ccgctgccag cggagtagag tgccacaggg caaagccggt gagccggtcg
     3181 ccatcccgga ccaacgtcgt atctccgatg cgaagttctc tcgtcaggac caactcgcgg
     3241 gtgaagtcca ctccgggaag tatccgatcc gacagccgcc gacactcctc cagctgctcg
     3301 ctccagcgat tccctgcccc cgagagtagc tccggaactc cagcgggccg ccgagaaacg
     3361 tcgtggacca gggtgacggt caggtgactg ggtaccagtc cgatccggct gtaaaaaccg
     3421 atattgtcca cggtgcgggg catggtctcg agcccaatgg tgg
//
LOCUS       DASRPQ010000189         1769 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2537433, whole genome shotgun sequence.
ACCESSION   DASRPQ010000189 DASRPQ010000000
VERSION     DASRPQ010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1769
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2537433"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1349..>1769
                     /locus_tag="VFD73_02235"
     CDS             1349..>1769
                     /locus_tag="VFD73_02235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72837.1"
                     /translation="MLDDYNVVRRATMHYMSHPLSVRLNDATIARLGRHAQRAHLAPR
                     TLAQRYVEEGLRMDEHPLIRFADGPAGRRARLVGTGKDVWEIIAVVRDNNGDAAETAR
                     YLEIPLGLVQAAISYYGAYREEIDQWIEANEQQAAEAH"
BASE COUNT          313 a          559 c          587 g          310 t
ORIGIN      
        1 tcggcggcca agaccgggtt gcggcaggcg atcagccgct cgccggggaa gtcccgggga
       61 gctgatctcg gccaggtcct gttggtcgaa caggcatagc tgcagcgagc tgcgcgggac
      121 cggccgcgcc ccggtcgtag gcgagaacga cctgcaggcg gtggctcaag ccggacgggt
      181 accggctcgg agttaggtag ccggcgcaag gctctgcgtg gatgaatacc gggccgcgtt
      241 cggaataggc accacgggtg cccggcggtg tgtaggcgat gagcagcatc cgctcgccgg
      301 gttcggattc ctgcaggcag catcgcagcg gagtgccgcc ctcggtatca acctgcacgg
      361 ttagctggtt gcgagcctca tccactccag ccgccttgag ctctcgcagt ctggcctgcg
      421 ggatcgcctc gaagatgagc ccgctagcac ccgaagttcc agccacgatc tgttcgcaag
      481 gtcgcttcgt cataccaggt agacgccggg cccagtcaga acgtgagatt tccccgatgc
      541 ttgttcaggc gacatcgaaa ttaccgctcc gcttagaatc cgaacggaac ggccgcggcc
      601 aacgtttctt tctaacggcg gtgtcgagtg ccagtggaaa ggatcataga gtaaggcata
      661 tattcagcct gcgccctttc ttgtcgccgg cagtcacgca acccgaccca ggcgaagact
      721 tgcgggcgcg ctcggcggcc aagaccgggt tgcggcaggc gatcagccgc tcgccgggga
      781 agtcccgggg agctgatctc ggccaggtcc tgttggtcga acaggcatag ctgcagcgag
      841 ctgcgcggga ccggccgcgc cccggtcgcg atcttgcggg gatgacccgg ccaggcgccg
      901 tcttatgtca gttgtgccgt taccggtgcg ggcctgtccg gcgctcggtt cccctggctg
      961 ccaaaggggc cagggatcgg acgggctgcc ccgggcagcc cagcaactgt cggcatgcct
     1021 ggcgggagtg gctcgctggg cggccagcgt cccctacggc agccattagt ccccaccggc
     1081 cctcaaggtc ctgtctaatt ttttcgaatc acaccattta gctggagtcc cgttacggaa
     1141 tcgaaccgtg gaccttctcc ttacgatgca ggccgacacc gtctggcagc atcgtgtccg
     1201 gtcgcgttcc tgcaagtcag agggatagca gtgtccggct aggtcgcact gcgtcgatag
     1261 ttgcctgaag ccgttgtcac ttggtttgtc actgactgcg cccggcagga atcgcggctg
     1321 gagtagccag gcgcgcacca gcaggcaaat gctggacgac tacaatgtag tgcgtcgtgc
     1381 tacaatgcac tacatgagtc atccgttgag tgttcgcctg aatgatgcca cgatcgcgcg
     1441 tcttggcagg cacgcacagc gcgcgcacct agccccgcgc accttggcgc agcggtacgt
     1501 ggaagagggc ctgcggatgg acgagcatcc gctcatccgg ttcgccgacg ggccagcagg
     1561 ccgacgggcc cggctcgtgg gaaccggcaa agacgtctgg gaaatcatcg cggtcgtacg
     1621 cgacaacaat ggcgacgccg ccgagacggc ccgctacctt gagatcccgc tcggcctcgt
     1681 ccaggccgcc atcagctact acggcgctta ccgggaggaa atcgatcagt ggatcgaggc
     1741 taatgagcag caggccgccg aggcccacg
//
LOCUS       DASRPQ010000190         1504 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2537503, whole genome shotgun sequence.
ACCESSION   DASRPQ010000190 DASRPQ010000000
VERSION     DASRPQ010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2537503"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..849
                     /locus_tag="VFD73_02240"
     CDS             <1..849
                     /locus_tag="VFD73_02240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HZI72838.1"
                     /translation="GSDEQKEQWLPLLASGQEIGCFGLTEPDYGSNPAGMVTTARETR
                     DGWVLNGTKMWITNGSQATVAIVWAKTGDVADPKSIRGFVVPTDTKGYTGKDQKGKLS
                     LRASDTSEIHLQDVHLPKTAILPGSSGLKSPLMCLTQARYGIAWGAIGAAMACYDEAL
                     RYAGSRVMFEKPIAATQIQQVRLVEMLTEITKAQFMTLQLGRLKDAGTMTPYQVSLCK
                     RNNVNMACECAREARRLLGANGILAEYHSMRHMANLESVYTYEGTHDMHSLIVGEAIT
                     GFGAYK"
     gene            922..1155
                     /locus_tag="VFD73_02245"
     CDS             922..1155
                     /locus_tag="VFD73_02245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72839.1"
                     /translation="MANRVTVWWQGEEYDAVRKQGEASDPDPGPVWQLLHDGAPLTSF
                     AADPGESPGSVKEKIFGWLEANRSRPALDVGRQ"
     gene            1256..>1504
                     /locus_tag="VFD73_02250"
     CDS             1256..>1504
                     /locus_tag="VFD73_02250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72840.1"
                     /translation="MSCWLILAGIAAPALLSAQQPDTAKTDTARVTTLKTIEVTNSIA
                     PTAGPAIGSGIPARISTVSGAAIEAWEPRLLADALGSQA"
BASE COUNT          307 a          455 c          483 g          259 t
ORIGIN      
        1 ggcagcgacg aacagaaaga gcagtggctg ccactgctcg cgtcgggtca ggagatcggc
       61 tgttttgggt tgactgagcc ggactatggc tcgaatccgg cggggatggt gaccacagcc
      121 cgggaaaccc gagacggttg ggttctcaat ggaaccaaga tgtggatcac caacggttcc
      181 caggcaacgg tggcaatcgt ctgggccaag accggcgatg tggccgaccc gaaatcgatc
      241 cgcgggttcg tcgttcctac cgacaccaag ggctacaccg gcaaagatca gaagggaaag
      301 ctctcgctcc gggcatcaga taccagcgag atccatttgc aggacgtaca ccttccgaag
      361 accgctatcc tcccgggctc cagtggcctc aagagcccac tcatgtgttt gactcaggcc
      421 cgctacggca ttgcctgggg cgctatcgga gcggcgatgg cctgctacga tgaagcgctg
      481 cgctatgccg gcagccgagt gatgttcgag aagccgattg ccgccacgca aatccagcag
      541 gttcggctgg tggagatgct gaccgagatc accaaggcgc agttcatgac cctgcagctc
      601 ggtcgcctga aggacgctgg aactatgaca ccgtaccagg tctccctctg caagcgaaac
      661 aatgtgaaca tggcgtgcga gtgtgcccgc gaggcccgcc ggctgctcgg ggccaacggg
      721 atcctggccg agtaccactc gatgcggcac atggccaacc tggaatcggt ctacacctac
      781 gaggggactc acgatatgca ctccctcatc gtgggcgagg cgatcacggg cttcggcgcg
      841 tacaagtgac gttcgtcacg gcctgattgc cgcggtgtcg ccaccctgga gagcgtcggg
      901 aacactacca gggagtgccc aatggcaaat cgggttacgg tgtggtggca gggcgaggaa
      961 tacgatgcag tacggaagca gggagaggca tccgatccgg atccgggtcc ggtatggcag
     1021 ctgctccacg atggagcgcc actgaccagc ttcgctgcgg acccgggtga gtcgcccgga
     1081 tcggtaaaag agaaaatctt tggatggtta gaggccaacc ggtcgcggcc cgcgctggat
     1141 gtaggccggc agtaattctc aatgctctga cgcggccccc cgcaggaata tcctcggggg
     1201 gctttattta tgtatggtcc aaactcgcgc gccgtttcgg ggaagcaaca gcgtgatgag
     1261 ctgctggctc attctcgccg gcatcgccgc tcctgcactg ctcagcgccc aacagccgga
     1321 cactgctaag accgataccg cccgggtgac taccctgaaa accatcgagg tcaccaactc
     1381 gatcgcgccg accgcagggc cggcgatcgg ctcgggtatc cccgcacgaa tctcgacggt
     1441 ctccggcgca gccatcgagg cctgggagcc gcggctgctg gcagatgcgc ttggcagtca
     1501 ggcc
//
LOCUS       DASRPQ010000191         1287 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4093406, whole genome shotgun sequence.
ACCESSION   DASRPQ010000191 DASRPQ010000000
VERSION     DASRPQ010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4093406"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..288)
                     /locus_tag="VFD73_02255"
     CDS             complement(<1..288)
                     /locus_tag="VFD73_02255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72841.1"
                     /translation="MTLRTVEMALATTGVDAAGQPTRVPLGVAGNGGADYGEDLGAEH
                     MLVNIGPQHPATHGVLRLVLELEGETVRRCIPHIGYLHSGFEKLGEYRQYNQ"
     gene            complement(285..953)
                     /locus_tag="VFD73_02260"
     CDS             complement(285..953)
                     /locus_tag="VFD73_02260"
                     /inference="COORDINATES: protein motif:HMM:NF012549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HZI72842.1"
                     /translation="MTADLAPSGARDLSTGRANGVSESIPALRSQFGPAIERHFVSSG
                     QTVVFVLRDRSHDVLAWLRDTPGQEFNYLTDITAVDYRDPERSLEVVYQLRSLGRKAD
                     LRLKVALDKRQPLEVRSVYDLWRGADWLEREVYDMFGVTFLGHPDLRRILMWETYAEG
                     YPLRKDFPLRGHFSRAEQTRQALAANPEAHYSLEELSIAESYGELPRDMQERLAKGER
                     GFLR"
     gene            complement(950..1267)
                     /locus_tag="VFD73_02265"
     CDS             complement(950..1267)
                     /locus_tag="VFD73_02265"
                     /inference="COORDINATES: protein motif:HMM:NF013242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72843.1"
                     /translation="MPQPRWSISMGACASTVGIFDNYSMDHGIDTSIPVHVYVPGCPP
                     RPEGLMYGIMLLQKKIKGETIADDQLRVEKLVGPSGLFLPPERVDELSEPFGNSVSQT
                     RSA"
BASE COUNT          216 a          418 c          415 g          238 t
ORIGIN      
        1 ctggttgtac tgccggtact cccccagctt ctcgaagcca gagtggagat agccgatgtg
       61 cggaatgcag cggcgcaccg tctctccctc gagctcgagg accaggcgca gcacgccgtg
      121 ggtggccggg tgctgcggcc cgatgttcac cagcatatgc tcggcgccaa gatcttcccc
      181 gtagtcggcc ccgccgttgc cggcgacgcc cagcggcacc cgagtgggct gcccggcggc
      241 atccactccg gtcgtcgcca gcgccatctc gaccgtacgt agcgtcatct cagaaatcct
      301 cgctcacctt tcgccaggcg ctcctgcatg tctctgggca gctcgccgta gctctccgcg
      361 atagacagct cttccaggga atagtgggcc tcggggttgg cggcgagtgc ctgtctggtc
      421 tgctccgccc ggctgaagtg acctcgcagg gggaagtctt tcctcaaggg atagccctcc
      481 gcgtaggtct cccacatcaa gatccgccgc aggtcgggat gtcccaggaa ggtgacgccg
      541 aacatgtcgt agacttcgcg ctccagccaa tcggcccctc gccagaggtc gtagacggac
      601 cggacctcca gtggctggcg cttgtccagt gcaaccttga gccggagatc agcttttcgt
      661 ccgagggagc ggagctgata gaccacctcg agggagcgct cggggtcccg ataatcaacg
      721 gcggtgatgt cggtgaggta gttgaattcc tgtcccggcg tgtcccgaag ccaggccagc
      781 acgtcgtgcg agcggtcgcg caggacgaag accacggtct ggccggacga gacgaagtgc
      841 cgttcgatcg cgggaccgaa ctgggagcgg agagccggta tggattccga gacaccgttc
      901 gccctaccgg tggacaggtc cctcgcgccg ctcggggcga gatccgctgt catgccgatc
      961 tcgtctgcga taccgagttg ccgaacggct cgctgagctc gtccactcgc tctggcggta
     1021 agaacagtcc ggagggtcct accagcttct cgacccggag ctggtcgtcg gcgatggtct
     1081 cgcccttaat cttcttctgc agcagcatga tcccgtacat cagcccttcc gggcggggcg
     1141 ggcacccagg cacgtacaca tgcaccggga tgctggtatc gatgccatgg tccatggagt
     1201 agttgtcgaa gatccctacg gtcgaggcgc aggcgcccat ggagatcgac cacctgggct
     1261 gcggcatctg atctcagatc cggcgga
//
LOCUS       DASRPQ010000192         1525 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2840239, whole genome shotgun sequence.
ACCESSION   DASRPQ010000192 DASRPQ010000000
VERSION     DASRPQ010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2840239"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..446
                     /locus_tag="VFD73_02270"
                     /pseudo
     CDS             1..446
                     /locus_tag="VFD73_02270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611772.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            669..902
                     /locus_tag="VFD73_02275"
     CDS             669..902
                     /locus_tag="VFD73_02275"
                     /inference="COORDINATES: protein motif:HMM:NF025742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HZI72844.1"
                     /translation="MPGAEVERIAAEDEDNPATDESHWANATIGVPPLKVPVNAKFDR
                     DVVDWFKRQGRGYQTRMNAVLRKYMEAQSKKAG"
     gene            complement(1113..1304)
                     /locus_tag="VFD73_02280"
     CDS             complement(1113..1304)
                     /locus_tag="VFD73_02280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72845.1"
                     /translation="MKVFVAFDQLYGLIETVPLTRVPKMGQVETIPADVRQPGKRCIE
                     FWGDGIRAIEAARSRSVHP"
BASE COUNT          299 a          470 c          491 g          265 t
ORIGIN      
        1 cccggcaccg ccgccgctgg cgggtgtggc agcgctacat ggatggtgag cgcttcgtct
       61 tcatcgacga gacagccgcg accacagcga tgacccgcct ctccggctgg agcccaaagg
      121 gcgagcgcct ggtcgatgcg gcaccggcgg gtcactggaa aaccacgacc gttgtggcgg
      181 gcctgcgggc aagcgggatc attgcacctt tcgtcttgag tgggccgatg acaggcgagg
      241 cctttcgtgc ctacgtcgag caggtgctcg cgcctgagct ggagccgggc gacgcggtgg
      301 tgatggacaa cctctccact cacaaggtcc ctggggtcga agaggcgatc agggcggtgg
      361 gagccagtgt gctttatctc ccgtcctact cgcccgatct gaacccaatt gagcagctac
      421 tcgccaagct caaggccctc ctcagagcct gtttgagtga ggaattccaa tagcttgccc
      481 gaaaagactt tgccgccgtg gctgtcggaa cctagcccac aaggatcggg caagcagagg
      541 gcagctggtc ttgtaggcca gagcctgctc gaggctgagg gccgatactg cggagacggt
      601 gtaaatcctt gaaatcgcac actcaaacag gctctaagga ccggaccgac tgggagcgtc
      661 tgcgggccat gcccggcgcg gaggttgaac ggatcgccgc cgaggacgag gacaatccgg
      721 ctacggacga gagccattgg gccaacgcca cgattggcgt cccgcccctc aaggtgccgg
      781 tcaatgccaa gttcgaccgg gatgtcgtgg actggttcaa acgccagggc cggggctatc
      841 agacccgcat gaacgcggtg ctccgcaagt atatggaagc gcaatcgaag aaggcgggct
      901 aaggcccgcc tcgtttcctc agagccatgc cgcccacgac cacgcgcacc ctcaacccgg
      961 tgccctttga gcactgggag cccaagcggt ttggacgtgg tgcggcagct ctcttacggg
     1021 tcccggtcct ggcggcagct tgtgaggcaa actgggcgca ccggatcaga cgatgggttt
     1081 gcggcaggcc ggaccgcggg cctatctgac catcaagggt gaaccgaacg ggatcgtgcc
     1141 gcttcgatcg cccggatgcc atcgccccag aattcgatgc accgtttgcc cggctggcgt
     1201 acgtcggccg ggatcgtttc gacctgtccc attttcggca cacgggtgag tggtaccgtc
     1261 tctatcaatc cgtaaagctg atcgaaagcc acgaacacct tcatccgatg agagccatcg
     1321 cggcttcgga tccgacagaa tagtccgcaa gcaagctctg ctcagcagcg gccgcacgtt
     1381 gatcaacgtg gtgcccatgc gccgatggtc agtgcccaat cccgcatccg ggaaatccgg
     1441 gtttaggctg ccgccgtggt cggcagtgac acgaacaccg gaagctgccg tgcaaggtta
     1501 gatgcacaca cggattgagc tgcag
//
LOCUS       DASRPQ010000193         1068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1273632, whole genome shotgun sequence.
ACCESSION   DASRPQ010000193 DASRPQ010000000
VERSION     DASRPQ010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1273632"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..440)
                     /locus_tag="VFD73_02285"
     CDS             complement(<1..440)
                     /locus_tag="VFD73_02285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72846.1"
                     /translation="MQRTRTANCGIVTALVLGGLLLARPASAQQPADTLDKPIELGNQ
                     SGDLGEGDQFPLQITGFAIGNYSYDGRTGDNSFAASKVAVALFREITGNAYVFGQLTT
                     ALQEPEGGGEPATEIEIDNLLVSLVPRGAANVAINAGKLDLPIG"
     gene            complement(559..924)
                     /locus_tag="VFD73_02290"
     CDS             complement(559..924)
                     /locus_tag="VFD73_02290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72847.1"
                     /translation="MMKGTWSPIISRGAASRLVAAATLAVFLLSQPAVICLPLCISGG
                     HYQASMEMHRHSPLQPCHSLDAIRAPASILQISSTMLPAAGSPSIPLLPLLSLGTRSP
                     VDLSSAPIPSLDPPPPRLI"
BASE COUNT          197 a          315 c          386 g          170 t
ORIGIN      
        1 aacccgatgg ggaggtcgag cttgcccgcg ttgatcgcga cgttggcggc tcccctgggc
       61 accagcgata cgaggaggtt gtcgatctcg atttccgtcg ctggctcgcc gccgccctcc
      121 ggctcctgca gcgccgtagt gagctggccg aagacgtagg cgttgccggt gatctcgcgg
      181 aacagcgcca ccgcgacctt gctggccgcg aacgagttgt ctccggtccg accatcgtag
      241 ctgtagttgc ctatagcgaa gccggtgatc tgaagcggaa actggtcgcc ctcgcccaga
      301 tcgcccgact ggttgcccag ctcgatcggc ttatcgagcg tatcggccgg ctgttgggca
      361 ctggctggtc gagcgagcag taacccgccc aacacgagcg ccgtcacgat cccgcagttg
      421 gcagtacggg tgcgctgcat gatcctcctc cacaggtcga agcagcagga tgccgcgcgg
      481 ccgagagtgg ctggcgtgaa cctcgcccgg ctgagtccgg acgcggcgac ggcaccatat
      541 agatgaaacg gttgctgctt agatcaggcg cggagggggt ggatccaggg aaggaatcgg
      601 ggcggagctc aggtcaaccg gtgatctggt gccgagcgac agcagcggca agagcgggat
      661 tgagggactt cccgctgccg gaagcatggt gctggaaatc tgtaagatgg aagccggagc
      721 acggatggcg tcgagcgagt gacagggctg gagcgggcta tggcggtgca tctccatgct
      781 ggcctgatag tgtccgccgg agatgcagag cggcagacag attacggccg gctggctcag
      841 caggaacacc gccagcgtgg ctgccgcaac cagccgggag gctgcgccgc gggaaatgat
      901 cggagaccag gtgcccttca tcatgttacg agcaaactag tgttccggag cgggagagcc
      961 aaggcggggc ggagaggcgg aggggcgggc ggtaaggcgg tacggcggta cggcggtacg
     1021 gcgacccacc cgccccccct gcctactctc cgtaggcgat cacacaga
//
LOCUS       DASRPQ010000194         1127 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3785428, whole genome shotgun sequence.
ACCESSION   DASRPQ010000194 DASRPQ010000000
VERSION     DASRPQ010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1127
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3785428"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..577
                     /locus_tag="VFD73_02295"
     CDS             <1..577
                     /locus_tag="VFD73_02295"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HZI72848.1"
                     /translation="LLIRQGNLVRTSATQPLVTINQIRPILVRFAVPAPNLPLIQEHR
                     GKDVVVRADAPGGGDPSEGTLSFVDNAVDTATGTILLKGKFPNDDGALWPGAFVNVRL
                     QLYVEPNALVVPASAVVAGQQGSFIYVIQKDSSAATRAVTVSRTAGDFAIINGDVQPG
                     DQVVTDGQLRLRQGSKVQIKAPADTSRLGAL"
     gene            574..>1127
                     /locus_tag="VFD73_02300"
     CDS             574..>1127
                     /locus_tag="VFD73_02300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HZI72849.1"
                     /translation="MNFTELFIRRPVMTTLVMAGILIFGIVAYRQLPVSDLPAVDYPT
                     INVSASLSGASPETMASSVATPLEKQFSTIPGVETMTSTSTQGSTSITLQFALSRNID
                     AAAQDVQAALSQAQRTLPRDVLPPSFRKVDPSAQAILYYALTTTTLPLTQLNDYAETF
                     LAQRLSTIDGVAQVQVYGSMKYAVR"
BASE COUNT          210 a          370 c          347 g          200 t
ORIGIN      
        1 tctgctgata cggcagggga atctggtgcg gaccagcgcc acccagccgc tggtcacgat
       61 caatcaaatc cgcccgatcc tcgttcgttt cgcggtgccc gcacccaacc tgcccctcat
      121 tcaggaacat cgggggaaag acgtcgtcgt gcgagcggac gcgccgggcg gtggtgatcc
      181 cagcgaaggc acgctcagct tcgtggataa cgcggtagac actgcgaccg gaacgatcct
      241 gctcaagggg aaattcccca atgacgacgg cgcgctctgg cctggtgcct tcgtgaacgt
      301 acggctccag ctctatgtcg agcccaacgc gctggtggtc ccggcatcgg cagtagtggc
      361 cggtcagcag ggtagcttca tctacgtcat tcaaaaggac agctcagcgg ccacccgggc
      421 ggtcacagtc agccggaccg caggagattt tgccatcatc aatggcgacg tgcagccggg
      481 agaccaggtg gtaactgatg gccagctccg gctccgccag ggatccaagg ttcagatcaa
      541 ggcaccggcg gatacttcgc ggttgggagc gttatgaact tcaccgaact gttcatccgc
      601 cggccggtca tgaccaccct ggtcatggcg ggcattctca tcttcggcat cgtcgcgtat
      661 cgccagctgc cggtcagcga cctgcccgcc gtcgactacc ccacgatcaa tgtctcggcc
      721 agcctgtcgg gtgccagccc ggagactatg gcatcgtcgg tggcgactcc gctggagaag
      781 cagttctcca ccatccccgg ggtggagacg atgacgtcga ccagcaccca gggcagcacc
      841 tcgatcactc tgcagtttgc cctgagccga aacatcgacg cagctgccca ggacgtgcag
      901 gcggcgctct cccaggctca gcggactctg ccccgggacg tgctgccgcc cagcttccgg
      961 aaggtggatc cgtctgcgca ggcgatcttg tattacgccc tcaccaccac gacgctgccg
     1021 ctgacgcagc ttaacgacta tgcggaaacg tttctagcgc agcggctgtc gacgatcgac
     1081 ggggtggccc aggtccaggt ctacgggtcg atgaagtacg cggtccg
//
LOCUS       DASRPQ010000195         1115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2213145, whole genome shotgun sequence.
ACCESSION   DASRPQ010000195 DASRPQ010000000
VERSION     DASRPQ010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2213145"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..212)
                     /locus_tag="VFD73_02305"
     CDS             complement(<1..212)
                     /locus_tag="VFD73_02305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72850.1"
                     /translation="MTDRDPPLERGSGSSGIDGMATMVQASSELLDEGTGAATGRHQD
                     GCRVQEHYVADRAGPSLENLMNDAGVV"
     gene            complement(224..703)
                     /locus_tag="VFD73_02310"
     CDS             complement(224..703)
                     /locus_tag="VFD73_02310"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI72851.1"
                     /translation="MLLRFADPADTSALLDVQEPGAVRGLGHIFPQEKHPFPRDELRA
                     RWLREIADADVTVYVAEDEDHRLVAFAATRADEFLHFGTAVDTWGTGLATEVHDEVLQ
                     RMSAAGVSRARLHVFEENRRARRFYEKHGWRATGRRRRTSFAPYPELLEYGHSPSVG"
BASE COUNT          200 a          373 c          348 g          194 t
ORIGIN      
        1 acaacgcccg catcgttcat gaggttctcg agggacggcc cggcccgatc cgcgacgtag
       61 tgctcctgaa cgcggcagcc gtcctggtgg cggccagtgg cggcgccggt tccctcgtcc
      121 agcagttcgc tgctggcctg caccattgtg gccatgccgt cgataccgga cgagcccgag
      181 ccacgctcga gcggtgggtc acggtcagtc aacgggcgag acgtcaaccg actgatggtg
      241 agtgcccata ctcgagcaac tccgggtagg gcgcgaaact cgttcgccgt cgccggccgg
      301 ttgcacgcca gccatgcttc tcataaaagc gccgcgccct gcggttttcc tcgaagacgt
      361 gcaagcgcgc ccgggacact ccggcggccg acatccgctg cagcacctcg tcatgcacct
      421 cggtggccag gcctgtgccc caggtgtcca cggcagtccc gaaatgaagg aactcgtccg
      481 cacgagtggc tgcgaacgcg acgagacgat gatcttcgtc ctcggccacg tacacggtga
      541 cgtcggcatc ggcgatctcc cgcagccacc tggctcggag ctcgtcccgg ggaaacgggt
      601 gcttctcctg cggaaagatg tgtcccaggc ctcggacggc gcccggctcc tgaacatcca
      661 gaagtgcaga cgtatccgcc ggatccgcga agcgaagcaa catgcctcga gagtcccaag
      721 gcctggcggt ggggtgcaac gtgatttgta ctccagccgc ctgccccgag ccgctgcata
      781 attgattgcg gccaccgctc gctgttgccg ggcgccggtg ctgactgaca agcaaggtgc
      841 tgactggcaa gcaaggtgct gactggcatc agctgctgac tgacaatcag ctgctgactg
      901 acaatcagct gctgactgac aatcagctgc tgtcgggcag atccgctgct gccgggcaat
      961 tcggctgctg acgaccaagg gggagtccac cggatggagt ccaccccaga cccacgggtc
     1021 acgtccgagg agcccatcgt agaaatcgtt ccttcgcccg agctgatggc cgcgcattca
     1081 cgctttaccg agacgctgtc cttggttccg accat
//
LOCUS       DASRPQ010000196         1116 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_21139, whole genome shotgun sequence.
ACCESSION   DASRPQ010000196 DASRPQ010000000
VERSION     DASRPQ010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21139"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..237
                     /locus_tag="VFD73_02315"
     CDS             <1..237
                     /locus_tag="VFD73_02315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72852.1"
                     /translation="PNVARRAYADHRDRLPDNAELMDYEDTQGRKLWIRKNEPSGMRP
                     GLPAAPVMIVQVAPGRVTEVPCLAGDELTGEITP"
     gene            234..767
                     /locus_tag="VFD73_02320"
     CDS             234..767
                     /locus_tag="VFD73_02320"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZI72853.1"
                     /translation="MIPAGELEKEIEALVAEHYKDLERYLRCGKIRLPEFLVGEVIND
                     ALLVIVDKRRRGHAFADVRAYLFRVARNAAIDSLKFLYAIEIPDSEAITAHPDGHDML
                     ASAEISYDIRQAVRQLPRRQRQVVELRFRGDFTVKETAEILDMAEGTVGPTTSAALRR
                     LKQIMTAPGGTREDESA"
     gene            764..>1116
                     /locus_tag="VFD73_02325"
     CDS             764..>1116
                     /locus_tag="VFD73_02325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72854.1"
                     /translation="MSEVIRDRAAAAFQRLIADAATGEASRDTECDIDQVMAAFRTAL
                     AHMDHSTRETARIRNLANVTDAQEAEEEESRTPATPAGHTLSQVRETAAAPLAASVTR
                     LAEPSDVPWRPGHPSG"
BASE COUNT          257 a          354 c          340 g          165 t
ORIGIN      
        1 cctaacgtgg cgcgcagggc atacgcagac caccgggacc ggttgccaga caacgccgag
       61 ctcatggact atgaggacac ccagggaaga aagctctgga tcaggaagaa cgaaccttcc
      121 ggtatgcgcc cggggctgcc agctgcgccg gtcatgatcg tccaggtagc gcccgggcga
      181 gtaaccgagg ttccctgcct ggcaggtgac gagctgacgg gtgaaataac gccatgatcc
      241 cggccgggga actcgagaaa gagatcgagg ccctcgtcgc agagcattac aaagaccttg
      301 agcgctacct gcggtgcggg aagatccgtc tccctgagtt cctcgtggga gaagtgatca
      361 acgacgcact cctcgtcata gtggacaaac ggcgccgtgg tcacgccttc gctgacgtca
      421 gggcttattt gttcagagtt gccaggaacg cggccatcga ctctctcaag ttcctctacg
      481 ccatcgaaat cccggactcg gaagccatca ccgcacatcc agacgggcac gacatgttgg
      541 caagcgcgga gatcagctac gacatccggc aagcggtcag gcagcttccc cgccgccagc
      601 ggcaggttgt cgagctgcgt ttccgaggcg acttcaccgt taaagaaaca gctgagatcc
      661 tcgacatggc cgaaggaaca gtaggaccca ccaccagcgc cgcactgcgg cgactgaagc
      721 agatcatgac ggcaccaggc ggaacccggg aggatgagag cgcatgagcg aagtcatccg
      781 cgaccgcgcc gccgcagcct tccagcgtct catagccgac gcggcaacag gcgaggcaag
      841 ccgggacacc gaatgcgaca ttgaccaggt catggcagct ttcaggaccg ccctggccca
      901 catggatcac agcaccaggg aaacggctcg tatccggaat ctcgctaacg tgaccgacgc
      961 gcaagaggca gaagaggaag aatctagaac tcccgccaca cccgcagggc acaccttgag
     1021 ccaggtgaga gaaaccgccg cggcgccgct ggctgccagc gtaactcgcc tcgctgagcc
     1081 ttcggatgtg ccatggcgac ctggccaccc ttctgg
//
LOCUS       DASRPQ010000197         1027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3786330, whole genome shotgun sequence.
ACCESSION   DASRPQ010000197 DASRPQ010000000
VERSION     DASRPQ010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3786330"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1027)
                     /locus_tag="VFD73_02330"
     CDS             complement(<1..>1027)
                     /locus_tag="VFD73_02330"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HZI72855.1"
                     /translation="ADTAAKLIGVAKEGRSPINLLVSTVGDELKTASNGRSRVITMAG
                     KDRSAIMLGGHQADAAYWTEDTLFVSSTYYMKQLPRWVQRFNASGHITRYRGAVWDRV
                     LPPAEYSFMGPDDVPAEENAEGMGRTFPHRLGTGGSGGGSFVESFQVSPFENEALVEF
                     AMEAVKQEALGQDDDTDLLGIGFSANDLVGHSYGPDSHEMMDITIRTDRLLQSFFTFL
                     SQQVGIQRVLIVITSDHGVVPFPELMQRRNPRLHARRLDPALIEAAAEQALRARYGVP
                     RRPGYVDQPSWIMYEGWPWLYLNLEGLRDKRIRIRDAERVAQRAVRAVPGVDRAITAT
                     ELARLRN"
BASE COUNT          190 a          332 c          311 g          194 t
ORIGIN      
        1 ctgttgcgta ggcgggccag ctccgtcgcg gtgattgcgc ggtccacccc gggcaccgcc
       61 cgcaccgcgc gttgggcaac ccgttcggcg tcccgtatcc ggatccgctt gtcccgcagt
      121 ccctccagat tgagatacaa ccagggccag ccttcataca tgatccagct gggctggtcg
      181 acatagccgg ggcggcgcgg cacaccatag cgggcacgca gcgcctgctc cgccgcggcc
      241 tcgatcagcg ccggatccaa acgtcgggcg tgaagccgag ggttccgacg ctgcatcagc
      301 tcaggaaacg ggaccactcc atgatccgac gtgatcacga tgagaacccg ctgtatcccg
      361 acctgctggc tcagaaaggt gaagaaactt tgcagtaagc ggtcggtacg gatggtgatg
      421 tccatcatct cgtgactgtc ggggccatag ctgtggccca ccagatcgtt ggccgagaag
      481 ccgatgccga ggagatcggt gtcgtcgtcc tgaccgaggg cttcctgctt gaccgcttcc
      541 atcgcgaatt ccacgagcgc ttcgttctcg aaaggagaaa cctgaaaact ttcgacaaag
      601 ctgcctccac cggatccgcc ggtacccaga cgatgcggaa acgtccggcc catgccttcg
      661 gcattttctt ctgccggtac atcatccgga cccatgaaac tgtactccgc cggcggaaga
      721 acgcggtccc agacggcacc gcgatagcgc gtgatgtgac ctgaggcgtt gaaccgctgc
      781 acccatcggg gcagctgctt catgtagtag gtcgaactga cgaagagagt gtcctccgtc
      841 caataggccg cgtctgcctg gtggcctccc agcatgatgg cagagcggtc ctttcccgcc
      901 atggtaatga ccctgctccg gccgttgctc gccgtcttga gctcatcgcc gacggtggag
      961 accagaagat tgatgggcga gcggccttcc ttggcgactc cgatgagctt cgccgccgta
     1021 tctgcgg
//
LOCUS       DASRPQ010000198         3663 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2539241, whole genome shotgun sequence.
ACCESSION   DASRPQ010000198 DASRPQ010000000
VERSION     DASRPQ010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3663
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2539241"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(51..1346)
                     /gene="larC"
                     /locus_tag="VFD73_02335"
     CDS             complement(51..1346)
                     /gene="larC"
                     /locus_tag="VFD73_02335"
                     /EC_number="4.99.1.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarC"
                     /protein_id="HZI72856.1"
                     /translation="MSDAQFAILDPVAGISGDMLLGALIGAGAPREWLLGLPARLGFD
                     QVRVEIEQTDRCGIQATKVSVILPGGIQEKPSDSIAHPDQESHSHDHPSTHSHPHSGH
                     TDGGHRHIGELIDLVRRARLSPWVEQRAVRAFELLGEAEGRVHGLPADRVPLHEVGAV
                     DALVDIVGAIEGFEQLGITRIYNRPVAVGSGWMRAAHGLMPVPAPATAILLEGLELAS
                     SGPVTGEATTPTGAVLLRVLSSGPPPSRWRAVSADAWGAGGRNPASYPNALRLMTASG
                     ASEAGEVVVLSTDLDDLSPEYLDPLREALVAAGALDVQVWATQMKKGRTGFRIEAIAN
                     PADADAVSSALFRHSTTAGIRRQVVERLTLARRQVEVTSADGTPVRVKILEGPDGPRV
                     KPEYEDVAALARRTGQPVHEVARDLHNRALWSLFPNKES"
     gene            complement(1399..3216)
                     /gene="uvrC"
                     /locus_tag="VFD73_02340"
     CDS             complement(1399..3216)
                     /gene="uvrC"
                     /locus_tag="VFD73_02340"
                     /inference="COORDINATES: protein motif:HMM:NF001824.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HZI72857.1"
                     /translation="MTAPAIPEALQRKLDTLPEGPGVYLWKAKDGEVLYVGKAKRLRS
                     RVRSYFATDFPDSPRNRLLQRLIFDVETIVVPSEPGSLILENNLIKEYRPRFNVRLKD
                     DKSYPSIAVTLGEPFPRVLVTRKRDIPGARYFGPYTDVGQLRRTLAIIRRLYTVRSCH
                     DRLPEDRRERPCLDYYIGRCRAPCMGWHDVPEYQRMVDDVVNFLEGRTQDVRVRVREA
                     MLEASSREDFERARELRDALRWLDRLEEPLSVEVMGTGDADVVGYARDGDDAVGVLMR
                     VREGRVVGREHRFLEGVEEEDDSAVLSAFLVRYYVPADDRARRVVVPFPPAEWETVQE
                     LLPGTDWAVPQRGTAQRWLELADQNARHLLESLRIESFETEERAEDPVYALGRDLGLS
                     VVPRSFVCIDISHNQGRDTVGSLVWFEAGRPRKSEYRKFKIQGVGQQDDYAAIQEVLI
                     RFLTRRRDEQLQVPDLIVIDGGKGQLSAAVAAAEQLGFSQLPIVSLAKREEEVFLPGR
                     SESLRLPRRSPSLRLLQRARDEAHRFGLAYNRKRRTQRTITSELLTIPGIGPTKRRRL
                     LERFGSLAGVKSASVAELASVPGFSVRQAERILDHLSRR"
     gene            complement(3241..>3663)
                     /locus_tag="VFD73_02345"
     CDS             complement(3241..>3663)
                     /locus_tag="VFD73_02345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72858.1"
                     /translation="RTPLRFAVIRVGLTIVLGYLFAIPLPGALGLDHRWGAAGLTVSA
                     GLAGWVEFALLRRALNRRIGRTGLPPALLARLWAGAVGAGLAGAVVKLMLETQPPIVV
                     ALFSLGMYGIAYFGITAQLGVTEARQMLTNLPWRRKGK"
BASE COUNT          692 a         1222 c         1108 g          641 t
ORIGIN      
        1 gcgccggatc cgatcagcag gccggccaac acgattcgcg ttttcactcg tcatgactcc
       61 ttgttcggga acagtgacca aagcgcccgg ttgtgcaagt cccttgccac ctcgtgcacc
      121 ggctgcccgg tacggcgggc aagtgctgct acatcttcat attccggctt cactcgggga
      181 ccatcaggcc cctccaggat cttgacccgg accggagttc catcggctga agtgacctca
      241 acctgccgtc gagccaaggt cagtcgctcg acaacctgac gccggattcc agccgtcgta
      301 ctgtggcgga agagtgcgct cgagacggca tcggcgtccg caggatttgc gattgcctcg
      361 atccgaaacc cggttcgccc ctttttcatc tgcgtggccc agacctgaac gtcgagcgct
      421 cccgcagcga ccagcgcctc ccgcagggga tcaagatact ccggactgag atcatcaaga
      481 tcggtggaca aaactacgac ttcgccggcc tcggaagccc ccgatgcggt catgagacgg
      541 agagcattgg gataggaagc cgggtttctt ccaccggcgc cccacgcatc cgcactgact
      601 gcccgccatc gcgagggtgg tggtcccgat gaaagcaccc gcagcagaac cgcccccgta
      661 ggagtggttg cctcaccggt gactggtccg ctcgacgcca gttccaatcc ttcgagaaga
      721 attgccgtgg ccggagccgg gaccggcatg agcccatgtg ccgcacgcat ccacccacta
      781 cccactgcaa ccggtcgatt gtagatccgg gtgatgccga gctgctcaaa tccttcgatc
      841 gctccaacga tgtcgaccag ggcatcaacc gctcccacct catggagcgg aacgcgatct
      901 gccggcagac catggacccg gccctccgct tcccccaaga gctcgaacgc ccgcactgct
      961 cgctgctcga cccagggtga cagccgggct cgcctcacca gatcaatcag ttccccgatg
     1021 tgccggtgtc caccgtcggt gtgtccactg tgcgggtgcg aatgagtaga agggtgatcg
     1081 tgcgaatgag actcttgatc cgggtgggca atactgtccg acggcttctc ctgaattccc
     1141 ccagggagaa tgacactcac tttcgtggcc tgaataccgc agcgatccgt ctgctcgatc
     1201 tccactcgca cctgatcaaa cccgagccga gccggaagcc cgaggagcca ttcccgcggt
     1261 gcgccggccc cgatgagggc cccgaggagc atgtcgccac tgatgcctgc gaccggatcg
     1321 agaatggcaa actgagcatc cgacatagac ttacaatatg ccgggaaatt ggctgaatgg
     1381 tagggcgcaa ccaatgagtc agcggcgact taaatgatcg agaatgcgct cggcctgccg
     1441 caccgaaaac ccgggcaccg aggcgagctc agcgactgag gcagatttga ctccagccag
     1501 gctgccgaac cgttccagca gccggcggcg tttggtgggg ccgatccctg gaatggtaag
     1561 aagctccgag gtaatagttc gctgggtgcg tcgcttgcga ttgtacgcca gcccgaatcg
     1621 atgggcctcg tcgcgggccc gctgtaacag tcgcaacgag ggactccggc gcggcagtcg
     1681 gaggctctca ctccttccag ggagaaagac ttcttcctcc cgctttgcca ggctgacaat
     1741 cggaagctgg gagaacccca gctgctcggc tgcagcgacc gcagcgctga gctgcccctt
     1801 tcccccatcg atcacgatga gatctggaac ctgcagctgt tcgtcacgcc ggcgggtcag
     1861 aaaccggatc agcacctcct gaatggcggc gtaatcatcc tgctgcccga ctccctggat
     1921 cttgaacttc cggtactcgc ttttgcgggg ccgccccgcc tcgaaccaca cgagtgatcc
     1981 gacggtatcg cggccttggt tgtgcgagat gtcgatacag acaaagctcc tgggcacgac
     2041 actcagaccg agatctcgac ccagcgcgta gaccgggtcc tctgcccgct cctcggtctc
     2101 gaacgactcg atgcgcaggc tttcgagcaa atgtcgggcg ttctggtctg ccagttccag
     2161 ccaccgctgc gcagtccctc gctgcgggac ggcccagtcg gttcccggca ggagctcctg
     2221 gacggtctcc cactctgccg gcgggaacgg gactaccacg cgacgcgccc ggtcgtcagc
     2281 ggggacatag tagcgcacca ggaatgcgct gagtaccgcg ctgtcgtcct cttcctccac
     2341 tccctccagg aagcggtgct cccgcccaac gacccgaccc tcccgaactc gcatgaggac
     2401 accaacggcg tcatctccat cgcgagcgta gccgaccacg tctgcatcac cggtccccat
     2461 cacctccacg ctcagcggtt cctccagccg gtcgagccag cgcagcgcgt ctcgcagctc
     2521 gcgggcccgc tcgaagtcct cacggctgct cgcttcgagc atggcttcac ggactcgcac
     2581 ccggacgtcc tgggtccggc cctcgagaaa gttgaccacg tcatcgacca tgcgctggta
     2641 ctctgggacg tcgtgccagc ccatgcaggg agcccggcag cggccgatgt agtagtccag
     2701 gcagggtcgc tctcgacggt cctccggcag ccggtcgtga caactgcgca cggtatagag
     2761 tcggcgtatg atggcgagtg tgcgccggag ctggcccacg tcggtgtacg gtccgaagta
     2821 gcgcgctccc ggaatgtccc gcttccgcgt gaccaggacg cggggaaatg gctctcccag
     2881 ggtaaccgca atggaggggt agctcttgtc gtccttgagc cggacgttga atctgggccg
     2941 gtactccttg atcagattgt tttcgagaat gagcgacccg ggctcactcg ggaccacgat
     3001 ggtctcgacg tcgaagatca gccgctgcag taggcgattg cgggggctat cgggaaaatc
     3061 ggtggcgaag tagctccgca cccggctgcg cagccgtttt gccttgccga cgtacagcac
     3121 ctccccatcc ttggccttcc acaggtacac accgggtcct tccggaagcg tatcgagctt
     3181 ccgttggagc gcttccggaa tggcaggtgc agtcatagcg agtacctggt cgcgacggtg
     3241 tcattttccc ttccgccgcc acgggagatt cgtcagcatc tgcctcgcct ccgtcacgcc
     3301 gagctgagca gtgattccga agtaggcaat gccgtacatc cccagggaaa ataacgccac
     3361 aacgatggga ggctgcgtct cgagcatcaa cttgacaacg gccccggcaa ggccggcacc
     3421 aaccgcgccg gcccaaagtc gggcgaggag ggccggcggc agtccagtcc ggccgatgcg
     3481 ccggttgagc gcacgccgaa ggagcgcgaa ctcgacccaa cccgccaggc cggcagagac
     3541 ggtgagtccg gcagcgcccc agcggtgatc gaggcctagt gcccccggaa gcggaatggc
     3601 gaaaaggtag ccgagtacga tagtgagtcc cacgcggatg acggcgaatc gaagcggagt
     3661 gcg
//
LOCUS       DASRPQ010000199         1820 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3786388, whole genome shotgun sequence.
ACCESSION   DASRPQ010000199 DASRPQ010000000
VERSION     DASRPQ010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3786388"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1589
                     /locus_tag="VFD73_02350"
     CDS             <1..1589
                     /locus_tag="VFD73_02350"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI72859.1"
                     /translation="LGIPSHFLRGKAFTAYIDSEDRPRFHQLLSSAVSQEGPRTASFR
                     IRPRDGPRRHAEMTFSCVRDADGTPTGFRWLVRDVTEQERLAQRIRTLNSELEFRVAE
                     RTADLVAAQQLSGDLLRREQAARRAAEASEAQSRHVQKLESIGVLAGGIAHDFNNLLH
                     VVLGNADIALSRLPGRSPAREPLEEVVRATLRAADLTRQMLAYSGKGAFVVRHLDLSK
                     EVREMATLLRTAISKQASLVWELAPSLPAVNADPTQIRQIVMNLITNASDALGDSGGS
                     ITLHTGVLRAEELNDGRFGVSVEGEEPPPSPQAPYVYLEVTDTGSGMTPDTLHRIFDP
                     FFSTKFAGRGLGLAAVMGIVHTHKGLIRIRTEPGRGTSFRILFPAVPTTVGEVVQSSP
                     ERGDWQGTGTILIVEDEEGVREVAERILSSIGFTTLTAVDGRDGLEQMERAADRITAV
                     LLDLSMPRLNGAETFRRLRAVYPGLPIIMMSGYTEESVAAEFLEAGSGPTAFLQKPFL
                     ADDLVLALRRVLEDTPAPLH"
     gene            complement(1586..>1820)
                     /locus_tag="VFD73_02355"
     CDS             complement(1586..>1820)
                     /locus_tag="VFD73_02355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72860.1"
                     /translation="RILPKLMGSAHLARTASHPALTAEARVPRTSKALEPSCLRLMLL
                     HRAVRDDWAVGDALGGTSCTETKWRIGRSGAVA"
BASE COUNT          319 a          608 c          576 g          317 t
ORIGIN      
        1 tgctcggcat ccccagccac tttctccgcg gcaaggcgtt cactgcatac attgactcgg
       61 aggaccggcc tcggttccac cagctgctca gctcggcggt cagccaggaa ggccctcgaa
      121 cggcgtcctt cagaatccga ccccgggatg ggccgcggcg ccacgccgag atgacctttt
      181 cctgcgtcag ggacgccgac ggcacgccca ccggatttcg ctggctcgtc cgcgacgtca
      241 ccgagcagga gcgcctggcc cagcggatcc gaaccctcaa ttccgagctt gaatttcggg
      301 tcgccgagcg taccgccgac ctggtagccg cccaacagct ctccggtgat ctgctccgcc
      361 gggagcaggc ggcgaggcgg gcggcagagg cgagcgaggc gcaatcgcgg catgtgcaga
      421 agctggagag catcggggtc ctcgccggcg gaatcgccca cgacttcaat aacctgttgc
      481 acgtcgtgct gggcaacgcc gacatcgcgc tgagccgatt gccgggccgg tcgcccgccc
      541 gggagccgct cgaagaggtg gtgcgggcca ctctccgtgc ggccgatctg acccgccaga
      601 tgctggcgta ttccggcaag ggcgcgttcg tggtccggca tctggacctc tccaaggagg
      661 ttcgggagat ggcgacgctg ctgcgaaccg cgatctccaa gcaggcatcc ctcgtctggg
      721 aactcgcgcc ttcactcccg gcggtgaatg ccgatccgac gcagatccgg caaatcgtga
      781 tgaacctcat caccaacgcc tccgacgcgc tgggcgattc cggcggcagc atcaccctgc
      841 acacgggagt gcttcgcgcg gaggagctga acgacggtcg attcggcgtc tcggtggagg
      901 gagaagagcc gccaccctca cctcaggctc cttatgtcta tctggaggtg accgacaccg
      961 gttccgggat gacgccggac acgctccatc gcatcttcga tccgtttttc tccaccaagt
     1021 ttgccggacg tggcctcggg ctcgccgcgg taatgggcat cgtccacact cacaaaggac
     1081 tgatccggat ccggacggag cccggtcggg gaaccagctt ccgcatcctc tttccggcgg
     1141 tccccaccac ggtcggggaa gtcgtgcaat cttcgccgga gagaggtgac tggcagggga
     1201 ccggcacgat tctgatcgtt gaagatgaag aaggagtgcg cgaagttgct gagaggatcc
     1261 tgagcagcat tggcttcacg acgctcaccg cggtcgacgg tcgagacggg ctcgagcaga
     1321 tggagcgcgc cgccgaccgg atcaccgcgg tgttgctgga tctgtcgatg ccgagactga
     1381 acggcgccga aaccttccgc cggttgcgcg cagtttaccc cggcctccct atcattatga
     1441 tgagcggtta caccgaagag tcggttgcgg ccgagttcct ggaggccggc tccggtccca
     1501 ccgcatttct tcagaaacca tttctggccg acgatctggt gctggcactg cgaagagtgc
     1561 tcgaggacac accagctccc ctgcactagg cgacggcgcc cgatcggccg atccgccatt
     1621 tagtctccgt gcaacttgtc ccacccaacg catctcccac cgcccagtca tcccgaactg
     1681 cccgatgcag cagcatcagt ctcagacaac ttggctcgag cgccttggat gtccgcggga
     1741 cccgagcttc cgcggtcaag gccgggtggc tggctgttct cgccaagtga gccgagccca
     1801 tgagcttggg caggatgcga
//
LOCUS       DASRPQ010000200         2626 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1587979, whole genome shotgun sequence.
ACCESSION   DASRPQ010000200 DASRPQ010000000
VERSION     DASRPQ010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2626
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1587979"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..503)
                     /locus_tag="VFD73_02360"
     CDS             complement(<1..503)
                     /locus_tag="VFD73_02360"
                     /inference="COORDINATES: protein motif:HMM:NF017346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-utilizing N-terminal
                     domain-containing protein"
                     /protein_id="HZI72861.1"
                     /translation="MTRIFRGVGVSPGVACAPALIIRWDFPEVADRTVSADEVEGEVR
                     RLREAVDYVVSHLRELGERVLQRAGPEESRIFDAQILMAQDQDFLASVETLIRKNQLS
                     AETAYEFRALELRALWSNAARLRERLADLHAIQMRMIHRLLGRTDSELWSVPSDEQVI
                     VVAHELSP"
     gene            complement(500..772)
                     /locus_tag="VFD73_02365"
     CDS             complement(500..772)
                     /locus_tag="VFD73_02365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HZI72862.1"
                     /translation="MIEREATIVNLEGLHARPAARIVRLASTFNSEIEICKDGVGVNG
                     KSIMGVMMLAAECGSSITIRADGPDAEQAAEALAALVATGFGETLQ"
     gene            complement(769..1503)
                     /locus_tag="VFD73_02370"
     CDS             complement(769..1503)
                     /locus_tag="VFD73_02370"
                     /inference="COORDINATES: protein motif:HMM:NF015570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HZI72863.1"
                     /translation="MNRRLQALLRLFAVQGTWNYERMLGVGMGYAAEPLLEDLKAVDP
                     VRHGEAVVRSAEFFNCHPNLAGLALGATTRAEYEGVPGPQIVRLRTALCSPLGSMGDQ
                     LFWAGLVPSLIGFTLVAIVLGAGTWAILLFLLAYNAVRVWTAYWSLQTGMASGMKVGS
                     AIGSSWLPRALEWAGPAAGFALGLALPVVAVWYLRGFGWTAAIGAAGVGVAGVALTRW
                     FGPGLTSVRFALMAMILLLLFRRMGL"
     gene            complement(1500..2177)
                     /locus_tag="VFD73_02375"
     CDS             complement(1500..2177)
                     /locus_tag="VFD73_02375"
                     /inference="COORDINATES: protein motif:HMM:NF015566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HZI72864.1"
                     /translation="MDFSPHVVLPLLLWGTLVGLDLVSVPQAMISRPLVAGAVAGYLA
                     GDLAAGVRIGVLFELFALDVLPAGAVRYPDYGPATIGAVALGVGTAWELGLGISAALG
                     LVLAVLGGWSLQVVRRWNARAIQRRAASLAAGESSAIRQLQYGGVLRDAARGFILTLG
                     GLVLASTITDSVRLDRQTAVAFTLVAIGSALAAGASGAFRSSGSGTRLKWLIAGLAAG
                     LVLAVLL"
     gene            complement(2177..>2626)
                     /locus_tag="VFD73_02380"
     CDS             complement(2177..>2626)
                     /locus_tag="VFD73_02380"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF015769.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HZI72865.1"
                     /translation="DRLIHGQVVVGWGRPMGIDLIILVDDQVASSDWEQELYRMAVAP
                     GIEVKFVTVAEAAAHLSEWQANGQRGLVLTGDLDTMAALHAASPEVIHRINLGGIHHR
                     PGRRERLPFVYLTDQEMRTLITLEQSGAVITAQDLPTTPAVPLKSLG"
BASE COUNT          537 a          909 c          795 g          385 t
ORIGIN      
        1 ggcgacagct cgtgggccac gacgatgacc tgctcgtcgc tgggcaccga ccacagctcc
       61 gagtcggtcc ggcccagcag ccggtggatc attcgcatct ggatcgcatg aagatcggcc
      121 agacgctccc gaagccgggc agcattggac cagagcgccc gaagctccag ggcgcggaac
      181 tcatacgcgg tctcggcgct gagctgattc ttccggatga gcgtctcgac cgaggccaga
      241 aaatcctggt cctgggccat cagaatctgg gcgtcgaaga tgcgggactc ttccggaccg
      301 gctcgctgca gcacgcgctc acccagctcg cgcaggtgag acacgacgta atcgaccgcc
      361 tcacgcagcc gacgtacctc cccctcgacc tcatcagcgc tgaccgtccg gtcggccact
      421 tcggggaaat cccagcgaat gatcagcgcc ggcgcgcagg ccacgccggg agagacgcca
      481 acaccccgga agatcctggt cactgcagcg tttcaccaaa gcctgtagcg accagtgccg
      541 ctagcgcttc cgccgcctgc tcggcatcgg gtccatcggc tcggatagtg attgagctgc
      601 cacactcggc cgcgagcatc atcacaccca tgatactttt gccattgacg ccgaccccat
      661 ccttgcagat ctcaatctcg gagttgaagg tgctcgcgag ccgcacgatc cgggctgcgg
      721 gccgggcatg gagtccctcc aggttgacga tggtagcttc gcgctcgatc acaggcccat
      781 ccggcggaag agcagcagaa gaatcatggc catgagcgcg aatcgcaccg aggtcaggcc
      841 cggtccaaac cagcgggtga gcgccactcc agcgacgcca acgccggcgg ctccaatcgc
      901 cgccgtccat ccgaagccac gcaggtacca gacggccacg accggcagtg ccagaccaag
      961 agcaaagccc gcggcagggc ctgcccattc gagggcccgg ggcagccagg agcttccgat
     1021 ggcgctgccc actttcatgc ctgacgccat cccggtctgc agcgaccagt atgcggtcca
     1081 gacccgaacc gcattgtagg caagcaggaa cagcagaatg gcccaggttc ctgcccccag
     1141 cacaatcgcc accagcgtga agcctatcaa tgacggcacc agaccagccc agaagagttg
     1201 atcgcccatg gagccaagcg gactgcacag ggccgtgcgc aaccgcacga tctggggacc
     1261 gggaacgccc tcgtactcgg cgcgtgtcgt ggcgcccaag gcgagcccgg ccaggttcgg
     1321 atgacagttg aagaactctg ccgaccggac cacagcttcg ccgtggcgga ccgggtccac
     1381 cgctttgaga tcttccagca gcggttcggc ggcgtacccc atgccgacgc ccaacatccg
     1441 ctcgtaattc caggtgccct gcaccgcaaa caagcgcagc agagcctgaa ggcgacgatt
     1501 cacagcagaa ccgccagtac gagcccggca gccaggccgg cgatcagcca cttgagtcgg
     1561 gtgccactgc ccgagctgcg gaaggcgccg cttgctccag ccgcgagagc cgaaccgatg
     1621 gcgacgagag tgaaggcgac ggcggtctgg cgatccagcc gcacggaatc ggtgatggtg
     1681 gacgccagta ccagacctcc gagcgtgagg atgaatccgc gggcagcatc tcgcaggact
     1741 ccgccgtact gaagctgacg aatcgcgctg ctctcgccgg ccgccagcga agcggcgcga
     1801 cgctggatcg cgcgcgcgtt ccagcgtcgc acaacctgaa ggctccatcc tcccagcacc
     1861 gccagcacca gacccagcgc ggcactgata ccgagtccca attcccatgc ggtaccaact
     1921 cccaaggcga cggctccgat cgttgccggc ccgtagtccg ggtaccgcac ggcaccggca
     1981 gggagcacat ccagggcaaa cagctcgaag agcaccccga ttctcacccc ggcagccagg
     2041 tcgccggcca gatacccggc aaccgcgccc gcaaccaggg gccgagagat cattgcctgg
     2101 ggcacgctca ccagatccag ccccaccagc gttccccaga gcaggagcgg tagcacaacg
     2161 tgaggtgaga agtccattaa cccaagctct tgagggggac cgctggcgtt gtcggtagat
     2221 cctgagcagt aatcaccgcg ccactttgct ccagagtgat gagggttcgc atctcctgat
     2281 cggtgagata gacaaacgga agccgctctc ggcgccccgg acggtgatga atgccaccca
     2341 aattgattcg gtggattacc tcgggactgg cggcatggag cgccgccatg gtatcgagat
     2401 caccggtgag caccaagccg cgttgtccgt tggcctgcca ttcactcaga tgggccgccg
     2461 cctcggccac ggtgacgaat ttcacctcta tgccgggcgc aaccgccatg cgatagagct
     2521 cctgctccca atcgctggag gcaacttggt catctaccag gatgatgaga tcgatgccca
     2581 ttggccgtcc ccagcccacg accacctggc cgtgaatgag acggtc
//
LOCUS       DASRPQ010000201         1846 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4408919, whole genome shotgun sequence.
ACCESSION   DASRPQ010000201 DASRPQ010000000
VERSION     DASRPQ010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1846
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4408919"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..434
                     /locus_tag="VFD73_02385"
     CDS             <1..434
                     /locus_tag="VFD73_02385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72866.1"
                     /translation="PMLSDLLLFVPGDPLPKSLEGALATALHSPTVRRSRPTGLYWET
                     YEKTDSSVTVELAVSNIKPKDKNEPPYPVGRPSCPFAAPAHSPVRLRWVEEPATRPSG
                     VGRSVVIDLHTVSPGRALVTLQTSVSGRVRGCSSREIQIVK"
     gene            complement(595..1269)
                     /locus_tag="VFD73_02390"
     CDS             complement(595..1269)
                     /locus_tag="VFD73_02390"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZI72867.1"
                     /translation="MGHTSRDTEDVAVFYARGLERERLTSGAGALELLRTQALLQRYL
                     PPAPAVVADVGGGPGRYALWLATLGYRVHLIDPVPLHIEQARDAGGRLPRTKLASADV
                     GDARSLPFSDASVDAVLLLGPLYHLTQRSDRVQALAEARRVCRPGGVVLAAAISRFAS
                     TLDGLRGGYLEDPIFAGIASADRRDGQHRNPTVPSTSPPRTSITPTSWPPNVPRRVWF
                     TRRRSP"
     gene            complement(1244..>1846)
                     /locus_tag="VFD73_02395"
     CDS             complement(1244..>1846)
                     /locus_tag="VFD73_02395"
                     /inference="COORDINATES: protein motif:HMM:NF019241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1572 family protein"
                     /protein_id="HZI72868.1"
                     /translation="CCCASSISEFRGAMSDFRAEYLADIQSQFAKLRSTAERAMAQVA
                     DADFATALDGENNSIAILVKHVSGNLRSRCTDFLTSDGEKPDRDRDAEFVLDSGDTRA
                     ALMNAWSRSWDLLAETLRSLVPDDLERTVHIRAEPHSVLRALQRQLGHLSYHVGQIVL
                     LARHWVGPRWQSLSIPRGQSRAFNQAMEAQRVHGPHVSRH"
BASE COUNT          337 a          585 c          610 g          314 t
ORIGIN      
        1 cgccgatgtt gtccgatctc ctgctgtttg ttccagggga tccgctgccg aagtccctgg
       61 agggtgcgct ggccaccgcg cttcattcgc cgactgtgcg ccggagccgg ccgactgggc
      121 tgtattggga gacgtacgaa aagaccgatt ccagcgtgac ggtggagctc gcggtgtcca
      181 acatcaaacc gaaagacaag aacgagccac cctaccccgt gggacgtccg tcctgtccct
      241 ttgcggcgcc ggcccactca ccggtccggc ttcgctgggt ggaggagccc gctacccggc
      301 ccagtggtgt cggtcgctct gtcgtgatcg acctgcacac cgtttccccg ggacgagcgc
      361 tggtgacgct gcaaaccagc gtgtccggtc gggtacgggg ctgctccagt cgagaaattc
      421 agatcgtcaa atagtcagca cctcacggca gccgtgcgac gacgagcagg tgtgcgctca
      481 cgcccaggag tgtgggctcg gcttctatct ccaccaacgt gtccagcaaa atctggcgcc
      541 gatgttgttc ggccaatcgt ctatccagat cgggatagag ccacgccggt ccttctatgg
      601 cgagcgtcgc ctggtgaacc agacccgccg cggtacattc ggcggccagc tcgtcggggt
      661 gatggaagta cgcggtggtg aagtactcgg gactgtcgga ttccggtgct ggccgtcccg
      721 ccgatcggcc gaagctatgc cggcaaaaat cggatcctcg agatacccgc cccggagccc
      781 gtcgagtgtc gacgcaaacc gggagatcgc ggcggcgagc accacgccgc caggccggca
      841 gacgcggcgc gcctcggcaa gtgcctgaac ccggtccgat cgctgggtca ggtggtagag
      901 cgggccgagc agaaggacgg catcgacact tgcatcggaa aaggggaggc ttcgcgcgtc
      961 gcctacgtct gcgctcgcaa gcttcgtccg gggcaaacgt ccgccggcgt cacgtgcctg
     1021 ctcgatatgg agagggaccg gatcgatcag gtgaacgcga tagcccagtg tcgcaagcca
     1081 gagcgcgtag cggccaggtc cgccgcctac gtcagcgacg acggccggcg cgggcgggag
     1141 ataacgctga agcagtgcct gggtacgcag gagctccagc gctccggcac cgctggtcaa
     1201 ccgctcgcgc tcgagtcctc gggcataaaa gaccgcgacg tcttcagtgt cgcgagacgt
     1261 gtggcccatg aaccctctga gcctccatcg cctggttgaa tgccctcgac tggccgcggg
     1321 gaatcgagag gctctgccac cgaggaccta cccagtgccg ggccagaaga acgatttgac
     1381 cgacatgata cgagagatgg ccgagctggc gctgcagcgc ccgcagcacg ctgtggggct
     1441 ccgctcggat atggacagtt cgctcgagat cgtccggcac cagcgatcgt agcgtctccg
     1501 cgagaagatc ccagctgcga gaccaggcat tcatcaacgc agcccgggta tcccccgaat
     1561 ccagcacgaa ctcggcatcg cggtcccgat cgggcttctc gccgtctgag gtgagaaagt
     1621 cggtgcatcg ggaccgaaga ttgccgctca catgcttgac caggatggcg atgctgttgt
     1681 tctcaccgtc gagggcggtg gcaaagtcgg cgtctgcgac ctgggccatg gcgcgctctg
     1741 cggtgctccg cagcttggcg aactgactct ggatgtcggc gagatactcg gcgcgaaagt
     1801 cggacatggc tcctctgaac tctgagatcg aagatgcgca gcagca
//
LOCUS       DASRPQ010000202         2101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3786482, whole genome shotgun sequence.
ACCESSION   DASRPQ010000202 DASRPQ010000000
VERSION     DASRPQ010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3786482"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..339)
                     /locus_tag="VFD73_02400"
     CDS             complement(<1..339)
                     /locus_tag="VFD73_02400"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZI72869.1"
                     /translation="MGIHHITAIAGDPQRNLDFYAGLLGMRLIKLTVNFDDPTTYHLY
                     YGDEIGRPGSILTFFPWPSGQRGRQGTGQAAVVAFAIPSSSLGFWLERLLTHQVKYEG
                     PVRRFEQQVLA"
     gene            complement(351..1364)
                     /locus_tag="VFD73_02405"
     CDS             complement(351..1364)
                     /locus_tag="VFD73_02405"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HZI72870.1"
                     /translation="MIATLPNRQLGATDLHLSTVGFGAWAIGGGGWSFGWGPQDDAAS
                     IASIRHAVQLGINWIDTAAVYGLGHSEEVVRRALEGIPAPDRPYVFTKCGMVWDDRKP
                     HVPPRQVLEPSSIRAECEASLRRLGLDRIDLYQFHWPDQTGTPIEDSWETMARLVEEG
                     KVRAAGVSNFSVELLERCESLRHVDSLQPPLSLIRRQAAEVEIPWCRAHGTGVIGYSP
                     LQSGILTDGFSEARLTSLAPDDWRRRSPEFTAPRLKRNLALRDALRPVAQRHSTTVSA
                     VAIAWTLAWPGVTAAIVGARSPEQVEGWIGAATLELTVEDLDEIARAIGQSGAGSGPA
                     LPR"
     gene            1415..>2101
                     /locus_tag="VFD73_02410"
     CDS             1415..>2101
                     /locus_tag="VFD73_02410"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HZI72871.1"
                     /translation="MPEGIPERNSPPGKGSPTSGYIPTLGVFSGTMMVVGGIIGSGIF
                     LNPAIVAQRVGSVKLTLLAWVLGGVIALIGALVYAELGSQRPLAGGGYIYLRDGYGRL
                     PAFLYAWTLLLVIATGAIAAVAVTFASYTSALLGLGPAMRVPLANGAIVILSAVNYLG
                     VRPGSITQNVFTLLKLAALACLIAAGLLAQPSAATTAAVPAQQGGTILALGAAMVPVL
                     FAYGGWQQTNF"
BASE COUNT          378 a          648 c          671 g          404 t
ORIGIN      
        1 tgcgagcacc tgctgctcga agcggcgtac cgggccctcg tacttcacct gatgagtcag
       61 gagccgctcc agccagaacc cgagtgagga ggatgggatg gcaaaggcga cgactgcagc
      121 ctgaccggtg ccctgacggc cgcgctggcc gcttggccaa gggaagaatg taaggatcga
      181 gcccggacgt ccgatctcat cgccgtaata gagatgatac gtggtgggat cgtcgaagtt
      241 cactgtcagc ttgatcagcc gcattccgag cagcccagcg tagaaatcaa gatttcgctg
      301 tgggtcgccc gcgatggcag tgatgtgatg gatgcccatc gttttcgctc ctacctcggc
      361 agagccggtc cggatccagc accggattgt cctatcgcac gggcaatctc atccagatct
      421 tcgactgtga gttcaagagt ggcggcgccg atccagcctt ccacctgctc gggcgaacgc
      481 gcccccacaa ttgcagcagt gacgccgggc cacgccaggg tccaggcgat ggccaccgcg
      541 ctcacggtgg tgctgtgccg ttgggccacc ggccggagcg catcgcgaag ggccaggttc
      601 cgcttcagtc gtggagcggt gaactccggg gaacggcggc gccagtcgtc cggggccagg
      661 gaggtcaggc gagcctcgga gaaaccatcg gtcaggatgc cggattgcag tggactgtag
      721 ccgatgacgc cggtgccatg ggcccggcac caggggatct ccacttcagc tgcctggcgg
      781 cgaatgagag aaagcggagg ctgcagagag tccacgtgcc gcagagattc acaccgttcc
      841 aggagctcca cgctgaagtt ggagactccg gcagcgcgga ccttcccctc ctccaccagc
      901 ctggccattg tctcccagga gtcttcgatc ggggtgccgg tctggtccgg ccagtggaac
      961 tggtagaggt cgattcggtc caatcccagt ctgcggagag aggcttcgca ttcggctctg
     1021 atcgaggacg gctccagcac ctgccgaggc ggcacatggg gcttacgatc gtcccatacc
     1081 attccacact tggtgaacac atatggccgg tcaggagcgg gaatgccttc gagtgcccgg
     1141 cggacgactt cctctgaatg acccagcccg tacactgccg ccgtgtcgat ccagttgatg
     1201 ccaagttgga cagcgtgccg aatactggcg atggaggcgg cgtcatcctg gggtccccac
     1261 ccaaacgacc accctccacc accaatggcc cacgctccga agccaactgt gctgaggtgt
     1321 aaatcggtgg cgcccagttg ccgatttgga agagtcgcta tcatccgtgc cgcccaatca
     1381 ccgcgtgtga ccgcctctca tcaaggagcc ggccgtgcct gaaggtatac cagagcgcaa
     1441 cagtccgccg ggtaagggat caccaacgtc gggatatatc cccacattgg gcgtgttctc
     1501 cggaacgatg atggtggtgg gcggcattat cgggtcgggc attttcctca accctgcgat
     1561 cgttgcgcag cgggtcggat cggtgaagct gaccttgctg gcgtgggtgc ttggcggcgt
     1621 catcgctttg attggagcac tggtgtacgc cgagctaggg tcccagcgcc cgctggcggg
     1681 cggcggatac atctacctga gagatggtta tggccggcta ccggcatttc tctatgcctg
     1741 gacgctgctg ctggtaatcg cgaccggcgc aattgcggcc gtggcggtca catttgcgag
     1801 ctataccagt gctcttctcg gactcggacc agctatgcgg gtgccgctcg ccaacggggc
     1861 catcgtcatt ctctccgcgg tgaattacct cggcgtgcgc ccgggctcca tcacccagaa
     1921 tgtctttact ctgctcaagc tggccgcctt ggcatgtctt attgccgccg gccttctggc
     1981 tcagccttca gccgctacca cagcggcagt gccggctcag cagggaggga caatactggc
     2041 gctcggtgca gctatggtgc cggtgctctt tgcgtacggc ggatggcagc agaccaactt
     2101 t
//
LOCUS       DASRPQ010000203         1084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1588338, whole genome shotgun sequence.
ACCESSION   DASRPQ010000203 DASRPQ010000000
VERSION     DASRPQ010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1588338"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..506
                     /locus_tag="VFD73_02415"
     CDS             <1..506
                     /locus_tag="VFD73_02415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72872.1"
                     /translation="EAEIPGIAQKFRLPREAVPYLAFRTAARGMLAEAQAQKDLLVRH
                     GLLEAVLDAMSDNLNKFEEAVEQGTEGRRSHVGASAELEALADELTQICRLMDAITRS
                     RFSEDPESLAQWESASNVIGPPRSAGGTESRSGGQADGQPVSRSVGQGTTNSESPPAA
                     GEVKPAA"
     gene            704..>1084
                     /locus_tag="VFD73_02420"
     CDS             704..>1084
                     /locus_tag="VFD73_02420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72873.1"
                     /translation="MNRRRWDIIACAGGLTDVIVLRFDPDQRLTMTQRNVKKKDLPVK
                     RFRSQEAWEKWLKAEHERSQGIWLEFAKKASGRASVNYKEALEVALCYGWIDGQTAAV
                     DETWYRQRFTPRRPRSKWSQINRVA"
BASE COUNT          221 a          328 c          367 g          168 t
ORIGIN      
        1 ccgaagccga aatccccggt atcgcccaga agttccggct cccccgggaa gccgttccct
       61 atctggcttt ccgaaccgcc gcccggggga tgctggccga agcccaagcc caaaaggacc
      121 ttctggtccg gcacggactg ctggaggcgg tcctcgacgc catgagcgac aacctgaaca
      181 agttcgagga ggcggtggag cagggcaccg aaggccgccg cagccatgtc ggcgcgagcg
      241 cggagctgga ggcgctggcc gatgagctga ctcagatttg ccgcctgatg gatgcgatca
      301 cccggagccg gttctccgag gatcccgaat cgctggctca gtgggagagc gccagtaatg
      361 tgatcgggcc gccgcggtcg gccggaggga cggagagtcg gagtggcgga caggcggacg
      421 gtcagccggt cagtcggtcg gtcgggcagg ggacgaccaa ctcggagagc ccaccggccg
      481 ctggtgaagt caagcctgca gcctgaggag tagttcgatg gagctgttca aatcagggag
      541 cttttcgcgc cggcggaaca cgggtcgcaa ccggaaaccg ctccctgtgc ttcaccacac
      601 gcaaaactag acgttcttct cgctcgccta taaccgggac atcgatccac cctccccaca
      661 ttccgattct ccaactcacc agcacatcgg gccaagctag ggtttgaacc ggcgccgttg
      721 ggacatcatc gcgtgcgcag gtggattgac cgacgtgatc gtgttacggt ttgatcccga
      781 ccagcgactg acaatgactc agcggaacgt caaaaagaaa gacctgccgg tcaagcgctt
      841 ccgttcccag gaggcgtggg agaagtggct caaagccgag cacgagcgct cgcaggggat
      901 ctggctggag tttgccaaga aggcgagcgg gcgcgcctcg gtcaactaca aggaagcgct
      961 ggaggtggcg ctctgctatg gctggatcga cgggcagacc gcggcagtgg acgagacctg
     1021 gtatcgccag cggttcacgc cgaggcggcc cagaagcaag tggtcgcaga tcaaccgcgt
     1081 ggcg
//
LOCUS       DASRPQ010000204         3085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3165222, whole genome shotgun sequence.
ACCESSION   DASRPQ010000204 DASRPQ010000000
VERSION     DASRPQ010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3085
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3165222"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2151
                     /locus_tag="VFD73_02425"
     CDS             <1..2151
                     /locus_tag="VFD73_02425"
                     /inference="COORDINATES: protein motif:HMM:NF019155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SEC-C metal-binding domain-containing protein"
                     /protein_id="HZI72874.1"
                     /translation="LKLYQAQLGMPKNKRLLKMLNETGIKQMVQRMELDAIADRKLPM
                     KQQRMRDLEETLYFVLDEKGHSVHLTDRGAEAMSPNDPGLFLVPDISEEIHQIDKDPD
                     LSPHDRIERRRQVESEYAIKSEKLHIIHKLLQAHVLYEKEVDYLVQEGQVMIVDEFTG
                     RVMTGRRWSDGLHQAVEAKEGVQVKGETQTFATITIQNYFRMYDKLAGMTGTAETEET
                     EFYSIYGLEVSVIPTHRPIRRIDQADRIYKTRKEKHDAIMDEVERLHGLGWPILIGTV
                     NVDVSETLSRQLKRRGLKHEVLNAKYHQREAEIVAGAGQKSAITIATNMAGRGTDIKL
                     GKDLDLSQPEAGLQIIGTERHESRRIDRQLRGRSGRQGDPGQSIFFLSLEDDLMRLFG
                     SDRIARWMDKSGAEEGEVITGGLVTRAIEQAQKRVELQNFQQRKRLLEYDDVMNQQRE
                     VIYSLRLFALERGEQLKAEARRMIEMALERAVTQFLSGTERPEEYDRGGLREALAIQY
                     LVSVDSLTDAEAAPGLEQMIALAKQEGEASFQRKITYLADFGNSIGLPEVDTQVLSQV
                     MLSVLDERWKDHLYDLDQLRNAIQYRAWGQKDPLVEYKREAFEMFEDLIHDIQSTFTE
                     RFLKIQVSAEPPRPEPQVRRVAAPEPVAEPVGAEDLFTAPPRRVAPPMAAPSLSGSLG
                     PAGRATAAVPEVGRNDPCPCGSGRKYKKCHGAGR"
     gene            2224..2907
                     /gene="radC"
                     /locus_tag="VFD73_02430"
     CDS             2224..2907
                     /gene="radC"
                     /locus_tag="VFD73_02430"
                     /inference="COORDINATES: protein motif:HMM:NF000642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HZI72875.1"
                     /translation="MALPVSILPTDDRPRERLWSLGPAALTTAELLAILLGTGGAGQD
                     VLGLAGHLLEVSEGSLRRLARRPRAELLRSPGIGPTKAGRLIAALELGARAAREERPP
                     VPRIREPEDVVRLFGTRLRDLQVEEFHLLALDSQSQVLREVLVTRGLLNSSLVHPREV
                     FRAAIAEAAAGIIVVHNHPSGDPTPSAEDRAATKQLVSAGRLLDIPLYDHVIIAGDQF
                     VSLATAGLL"
     gene            2904..>3085
                     /locus_tag="VFD73_02435"
     CDS             2904..>3085
                     /locus_tag="VFD73_02435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72876.1"
                     /translation="MTGTLPDLAPDLRAVLEKHADRLDLELVDRALRFSASAHRGQKR
                     MSGEDFVSHSIAVALIL"
BASE COUNT          627 a          935 c          996 g          527 t
ORIGIN      
        1 ctcaaactct accaggccca gctgggcatg ccgaagaaca agcggctgct caagatgctg
       61 aacgagacgg gcatcaagca gatggtccag cggatggagc tcgatgccat cgccgaccgc
      121 aagctcccga tgaagcagca gcggatgcgc gacctggagg agacgctcta cttcgtgctc
      181 gacgagaagg gccattcggt ccatttgacc gatcgaggag ccgaagcgat gtcgcccaac
      241 gaccccggcc tcttcctggt acccgacatc tccgaggaga tccatcagat cgacaaggat
      301 cccgatctct ctccccacga tcggatcgag cggcgccggc aggtggagtc ggagtacgcg
      361 atcaagagcg agaagcttca catcattcat aagctgctgc aggcccacgt tctctacgag
      421 aaagaggtgg actacctggt gcaggaaggc caggtaatga tcgtcgacga attcaccggg
      481 cgagtgatga ccggccggcg ctggtccgac gggttgcacc aggcagtgga ggccaaggaa
      541 ggcgttcagg tcaaaggcga aacccagacc tttgccacca tcacgattca gaactacttc
      601 cggatgtacg acaagctggc gggaatgacc ggaaccgccg aaacggaaga gaccgagttt
      661 tactcgatct atgggctcga ggtcagcgtt atccccacgc accgacccat tcgccgcatc
      721 gatcaggccg atcgcatcta caagacccgc aaagaaaaac acgacgcgat catggatgag
      781 gtggaacggc tgcacgggct cggctggccg atcctgatcg gcaccgtcaa tgtcgacgta
      841 tcggagacgt tgtcgcgcca gctcaaacgc cgcggactca agcacgaggt gctcaacgcc
      901 aagtatcacc agcgtgaggc ggagatcgtc gcgggagcgg gacagaagag cgccatcacg
      961 atcgcgacca acatggcggg ccgcggaacc gacatcaaac tgggtaaaga cctggacctg
     1021 agtcagccgg aagcaggact gcagatcatc ggcaccgagc ggcacgagtc ccggcgcatc
     1081 gaccggcagc ttcggggtcg ttccggccga cagggagacc cggggcagtc gatcttcttt
     1141 ctgtctctcg aagatgattt gatgcggctc ttcgggtccg accgcatcgc ccgctggatg
     1201 gacaagagcg gggcggaaga aggcgaagtc attactggcg ggctggtcac tcgcgccatc
     1261 gaacaggcgc agaaacgggt ggaattgcag aatttccagc agcggaaacg gctgctggag
     1321 tacgatgacg tgatgaacca gcagcgcgag gtcatctact cgcttcggct gtttgcgctg
     1381 gagcggggcg aacagctcaa agccgaagct cgtcgtatga tcgagatggc gctggagcgg
     1441 gcggtcaccc agttcctctc cggcaccgag cggccggaag agtacgaccg gggtgggctg
     1501 cgcgaggcgc tcgccatcca gtacctcgtc agcgtggatt cgctgaccga tgccgaagcg
     1561 gcgccggggt tggagcagat gatcgcactg gcaaagcagg agggcgaggc gtcattccag
     1621 cgaaagatca cttacctggc cgacttcgga aactcgattg gtttgccgga ggtggatacc
     1681 caggttctct cgcaggtgat gttgtcggtc ctggatgagc gctggaaaga tcacctctac
     1741 gacctcgatc agctgcgcaa cgccattcaa tatcgggcct ggggacagaa ggacccgctg
     1801 gttgagtaca agcgcgaggc cttcgagatg ttcgaggatt tgatccacga catccagtcc
     1861 accttcaccg aacgattcct caagattcag gtcagtgccg agccgcccag gccggaacct
     1921 caggtccgac gcgtggcggc cccggaaccc gtcgcggaac cggtcggcgc ggaggacctc
     1981 tttaccgctc ctccccggag agtcgcccca ccgatggcgg ccccgagtct gagcggctca
     2041 ctggggccag ccggacgggc aacggcggcg gtacccgagg tcggccgcaa cgatccctgc
     2101 ccctgtggct cggggcggaa gtacaagaag tgtcacggag ccggccggta gcaagagcgt
     2161 aagttccgtt ggcttcgcag gataatggca ccgcgcagag ccggagggcc gctatcctgc
     2221 aggatggcac tcccggtttc catccttccc accgacgatc gtccccgaga gcggctctgg
     2281 tcgctcgggc ctgccgcgtt gacgaccgcc gaacttcttg ccatcctgtt aggtaccggt
     2341 ggtgctggcc aagatgttct ggggctggcg ggccacctgt tagaggtcag tgaggggtcg
     2401 ctccgccgtc tggcgcgacg ccctcgtgct gaactgcttc ggtctcctgg catcggtccg
     2461 accaaagcag gacggctgat tgcagccttg gaactgggcg cgcgggccgc gcgggaagag
     2521 cgaccgccgg tcccccgcat cagggaaccc gaggacgtgg tccggttgtt cggtacgcgg
     2581 ttgcgggacc tgcaggtcga agagttccac ctgctggcgc tggacagtca aagtcaggtg
     2641 ctgcgcgagg tgctggtcac tcgtggattg ctgaacagtt cgttggtgca tccgcgggag
     2701 gtctttcgtg cagccatcgc agaagccgcg gcgggaatca tcgtcgttca caatcatccc
     2761 agtggcgacc cgacaccctc ggcggaagac cgggcagcta ccaagcaact ggtctcggcc
     2821 ggccgactgc tggatatacc gttgtatgat catgtcatca tcgccggaga ccaattcgtg
     2881 agccttgcaa ctgcaggcct actgtgaccg gaactctgcc cgatctggcg cccgacctcc
     2941 gagcagtgct ggaaaagcac gccgaccgtc tcgatctcga gctggtcgac cgcgcgctcc
     3001 gcttcagcgc gtccgctcac cggggccaga agcggatgtc gggcgaagat ttcgtgtctc
     3061 actccatcgc ggtggcgctc attct
//
LOCUS       DASRPQ010000205         1039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3165314, whole genome shotgun sequence.
ACCESSION   DASRPQ010000205 DASRPQ010000000
VERSION     DASRPQ010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3165314"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            63..317
                     /locus_tag="VFD73_02440"
     CDS             63..317
                     /locus_tag="VFD73_02440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72877.1"
                     /translation="MSASSAEPSDDHEMIHLGGETAVVVPLGEYRMLAALREHASAEE
                     IEEAEIDAAIAEHEAWKAAGRPGGTIPHEVVMAELLGGGR"
     gene            314..544
                     /locus_tag="VFD73_02445"
     CDS             314..544
                     /locus_tag="VFD73_02445"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HZI72878.1"
                     /translation="MRIVWRRDALVSARRFMGDQSGIRAINQAVATLADDPEPPDAFV
                     RGSYRRLRVGAYRVLYEVENDVITILRVDKAL"
     gene            complement(626..>1039)
                     /locus_tag="VFD73_02450"
     CDS             complement(626..>1039)
                     /locus_tag="VFD73_02450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72879.1"
                     /translation="DPEPAELEPAEPEPVEPELEEPELVEAPEPELDEEFDVPVEVDP
                     LDVVLFADPGRARASAPAVTTLATVTVVVADRTLARPRSLAATAWRIPSFWRALLISL
                     ILRSRTRKSLHEPSGRAMSPASSWRAPAAVATQAT"
BASE COUNT          176 a          351 c          340 g          172 t
ORIGIN      
        1 aacagcattc tgagtgcgtc ccttgaccac ccagacgacc ttccgggaat agcatcattt
       61 ccatgagcgc atcgtcagca gagcccagcg atgatcacga gatgattcat ctgggcggcg
      121 agacggccgt ggttgttcct ctgggtgagt accgcatgct cgcagcgctc agggagcacg
      181 cctcggccga ggagatcgag gaggcggaga tcgacgccgc catcgcggag cacgaggcgt
      241 ggaaagcggc cggccgaccg ggcggcacca ttccccacga ggtagtcatg gccgagctgc
      301 ttggcggcgg ccggtgagaa tcgtctggcg ccgcgatgca ctggtgtcag cgcgcaggtt
      361 catgggcgat cagtcaggga tccgagccat caaccaggct gtcgcgacct tagccgacga
      421 cccggagccg cccgatgcat tcgtgcgcgg cagttaccgc aggctccgcg tcggggctta
      481 ccgggtgctg tacgaagtgg agaacgacgt gatcaccatc ctgcgggtag acaaggctct
      541 ctgagccgcg agacccagcc agcctgctcg tctccgcccg aacagcattc tgcttttctc
      601 cctccggcgt cgcttcaggt gtctgtcatg ttgcctgggt agccacggcc gccggagcgc
      661 gccatgagct ggccgggctc atagctctcc cagagggttc gtgcagggat tttcgagtac
      721 gcgaccgcag gatgagtgat atgagcagcg cacgccaaaa tgacggaatc cgccaggccg
      781 tggcggccag ggagcgcggc cgggccaagg tccggtccgc gaccaccacg gtcaccgtgg
      841 ccagcgtggt cacggccggc gcgctggctc tggccctgcc cgggtccgcg aacaagacca
      901 catccagcgg atccacctcg accggcacgt cgaactcctc gtccagctca ggctccggcg
      961 cctccaccag ctccggctcc tccagctcgg gttctaccgg ctccggctcc gctggctcga
     1021 gctccgctgg ctccggatc
//
LOCUS       DASRPQ010000206         2075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2842311, whole genome shotgun sequence.
ACCESSION   DASRPQ010000206 DASRPQ010000000
VERSION     DASRPQ010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2075
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2842311"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1394)
                     /locus_tag="VFD73_02455"
     CDS             complement(<1..1394)
                     /locus_tag="VFD73_02455"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family metallopeptidase"
                     /protein_id="HZI72880.1"
                     /translation="MRGADVAALLLGLLAANRAAAQTTRAERSGYRETSSYDDVLTFL
                     DSLQRVSSDLRVATLATSPEGRRVPCVITGHPLALTPAEAHRAGKPIVYLQANIHAGE
                     VEGKEAAQMLLRDLTVGSLRPLLQRLTLLVVPIYNVDGNERWGPGERNRPGQNGPGLV
                     GQNPNGQGLNLNRDYVKMEAPETRGSTSLIESWDPDLFIDLHTTNGSYHGYVLTYAPG
                     LNPNPTPSTTLIRDRVLPLIQRRMLQKYGEKTFSYGNFRNQNPDSLTQGWETYDARPR
                     FGTNWMGLRGRPAILSEGYSNAPFEVRVHATYDFVHEILEYVADQGGSLHAAITASEH
                     QRPDSVIVRSVLAPPIRQEVIAEITTEAGEGTGGYARRKRTGIYKAIRMPVFDRFTAA
                     RKEAIPAAYLIPPRLTDVVALLRRQGIAVDVLTQSRNVVPIESFAVESLAVDSLFEGH
                     RTVRLEGHWNSQPV"
     gene            complement(1381..>2075)
                     /locus_tag="VFD73_02460"
     CDS             complement(1381..>2075)
                     /locus_tag="VFD73_02460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72881.1"
                     /translation="LPQGDSTLVLLQTSSETLRLTTVSRQARESLNGFLEPQDAIAID
                     PGYSPLLGLGAVVHEWQHLLFRRCQLERYADGLGRRDARIVRLPAVEPHLAEGFAEWS
                     AERILDPVVRRWPLIGLGELEKRAGLVQAHSDDQHALGYALVRALAAALPQPELTTEL
                     LLRYADAPAGLLNEPKLRKAWSQYHGGSQVEAGAAAPRILMPEVTFTIEDGVPDVEST
                     RILLPPGSDARR"
BASE COUNT          381 a          651 c          658 g          385 t
ORIGIN      
        1 tccacgggct ggctgttcca atgcccctcg agccgaacgg tgcggtgacc ttcgaagagc
       61 gagtccacag ccaggctttc caccgcaaat gactcgatcg gaacaacgtt cctggactga
      121 gtgaggacat cgactgcgat cccctgtctc cgcaataggg ccactacatc ggtcagtcgc
      181 gggggaatga ggtacgccgc cgggatcgcc tccttacggg ccgcggtgaa gcgatcgaac
      241 accggcatcc gaatggcttt gtagatcccc gtccgcttgc gcctggcata gcctcccgtg
      301 ccttccccgg cttcggtggt aatttctgca atcacttcct gcctgatcgg aggcgccagc
      361 accgagcgaa cgatgacaga gtccggtcgc tgatgctccg acgcggtgat ggcggcgtga
      421 aggctcccgc cctggtcagc gacgtactcg aggatctcat gcacgaagtc gtaggtggca
      481 tggactctca cttcgaaagg agcgttgctg tacccctcac tcagaatggc gggccggccg
      541 cgcaggccca tccagttggt tccaaatcgc ggacgcgcat cataggtctc ccagccctgg
      601 gtcaacgaat cggggttctg attacggaag ttgccgtacg agaatgtctt ctcgccgtat
      661 ttctgaagca tgcgtctttg gatcagcgga agcacccggt ctcggatcag ggtggtcgag
      721 ggagtcggat tgggattgag cccgggagca taggtcagga cgtacccgtg atagctccca
      781 ttggtggtat gcaggtctat gaagagatca gggtcccagc tctcgatcag tgaggttgac
      841 cccctcgttt ccggcgcctc catcttgaca taatcgcggt tgagattgag accctggccg
      901 ttgggatttt ggccaaccag cccggggccg ttttgcccgg gacggttgcg ctcgccgggg
      961 ccccagcgct cgtttccgtc gacgttgtag atcgggacca ccagcagtgt cagccgctgc
     1021 aacagcggcc gcaaagatcc gaccgtcaga tccctcagca gcatttgagc ggcttctttg
     1081 ccctccactt cgccggcatg aatgttggcc tggaggtaca cgatcggctt cccggctcga
     1141 tgtgcctccg ccggagtgag cgccagcggg tggccggtga tcacacaggg cacccgacgg
     1201 ccttccgggc tcgtcgccag cgttgcgaca cgaagatcgc tgcttacccg ctgcagcgag
     1261 tccagaaagg tgaggacgtc gtcgtacgac gaggtctccc gatagccgga ccgctcggcg
     1321 cgagtcgtct gagcggcagc gcgattcgcc gccagcaatc ccagcagaag agccgcgaca
     1381 tcagcgcctc gcatcggaac ctggcggaag cagaatgcgg gtggattcca cgtcgggaac
     1441 gccgtcctcg atggtgaacg tgacctcggg catcaatatc ctgggggccg ccgcccccgc
     1501 ctcgacttgc gagccgccgt gatactggct ccaagccttc cggagcttgg gctcgttgag
     1561 caaaccagcc ggggcgtcgg cgtaccgcag caacagctcc gtggtcagtt ccggctgcgg
     1621 cagtgccgct gccagcgctc gcaccaatgc gtagccgagc gcgtgttgat cgtcggaatg
     1681 agcttgcacc agaccggctc gcttctccag ctcacccaac ccgatgagtg gccagcggcg
     1741 gaccaccgga tcgagaatgc gctccgcact ccattctgca aagccctcgg caagatgggg
     1801 ctccaccgca ggcagacgga cgatacgagc atctcggcgg cccaagccat cggcgtatcg
     1861 ttccagctgg cagcggcgaa agaggaggtg ctgccattcg tgcactacgg ccccgagccc
     1921 gagcagcggt gaatatccgg gatcgatcgc gatggcatcc tgaggctcga gaaagccgtt
     1981 gagactttct ctcgcctgcc gagaaacggt ggtgagccgg agcgtctccg aagaggtttg
     2041 gagcaggacc agggtagagt cgccttgcgg cagcg
//
LOCUS       DASRPQ010000207         1551 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1275627, whole genome shotgun sequence.
ACCESSION   DASRPQ010000207 DASRPQ010000000
VERSION     DASRPQ010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1275627"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(185..>1551)
                     /gene="glmS"
                     /locus_tag="VFD73_02465"
     CDS             complement(185..>1551)
                     /gene="glmS"
                     /locus_tag="VFD73_02465"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HZI72882.1"
                     /translation="YGLAFISSEEPGVIVAARNGSPLLVGVGENEFFVASDASPLLEH
                     TRAVVYLDDGEMVVLTRDGYRVRNLETARISKPVNQIDWDLATVERGGYAHFMLKEIC
                     EQAESLCNTLRGHLLEEEGTARVSGLNLTDDELKQFERVIITACGTSWHSGIIGEYML
                     EEMARLPVEVEYASEFRYRNPVVDPKTLVIGISQSGETADTLAAIREAKRRGGRTVGL
                     VNVVGSTIAREVDGGIYLHAGPEIGVASTKAFTSQVAALALITLRIARLRNLSILQGR
                     EFIKALQRLPGQVSQILERSHEIEALADRFLRTSKNALYLGRGVNFPVALEGALKLKE
                     ISYIHAEGYPAAEMKHGPIALIDENMPVVFIAPRDAVHSKIVSNIEEVKARGGKVIAL
                     INDGDAEIQRLADATFTIPVTLDLLTPILTSIPLQLLSYYVAVRRGCNVDQPRNLAKS
                     VTVE"
BASE COUNT          290 a          501 c          461 g          299 t
ORIGIN      
        1 cgtctctttc ggatctcgcc gcctggctca gagcagttgc gcaggacgac gtatcctacc
       61 tggtgatcga gccgtccgtc acaccctgac ccctgagcta agaaggacaa acccccggcg
      121 agagccgggg gtttcccgtg agatgccaag tgcggtgagg gaggcggcgt tatcgtttcg
      181 ccggctactc cacagtcacc gacttggcaa gatttcgggg ctgatccacg ttacagcccc
      241 ggcgaacggc gacatagtac gacaataact gcagcggaat actggtgaga atcggagtca
      301 gcaggtcgag cgtcaccgga atggtaaagg tggcgtcggc caaacgctga atctcagcgt
      361 ccccatcgtt gatcagggcg atgaccttcc caccgcgagc ttttacctct tcgatattcg
      421 agacgatttt cgagtgcacc gcgtcccggg gcgcgatgaa caccaccggc atgttctcgt
      481 cgatcaaggc gatcggcccg tgcttcatct cagcggccgg gtacccttcc gcgtggatgt
      541 aggagatctc cttcagcttg agcgcccctt ccagggccac cgggaagttg actcctcggc
      601 cgagatagag cgcattcttg ctggtccgca ggaagcggtc ggccagcgct tcgatctcat
      661 gactccgctc cagaatctgc gacacctgtc ccggcaatcg ctggagcgcc ttgatgaact
      721 cgcgtccctg gaggatgctc aggttcctga gccgggcgat gcgtaaggtg atcaatgcga
      781 gggcggcgac ctggctggtg aacgccttgg tgctggcgac cccaatctcg ggacccgcgt
      841 ggagatagat gccgccatcc acctctcgcg cgatggtcga ccctaccacg tttaccaggc
      901 cgacggtccg gccgccgcga cgcttcgcct cccgaatcgc tgccagcgta tcggctgtct
      961 ctcccgattg ggagatgccg atgaccaggg tcttgggatc gaccacggga ttgcggtagc
     1021 ggaactccga ggcgtactct acctccaccg gcaggcgcgc catttcctcc agcatgtatt
     1081 cgccgatgat tcccgagtgc caggaggtgc cgcacgcggt gatgatcacc cgctcgaact
     1141 gcttcagctc atcgtcggtc aggttcagac cgctgacccg cgcagttccc tcctcttcca
     1201 gcaggtgacc acggagcgtg ttgcacagac tctcggcctg ctcacagatc tccttcagca
     1261 tgaagtgggc atagccgccg cgctccacgg tggcgaggtc ccaatcgatc tggttgaccg
     1321 gtttgctgat gcgcgcggtt tccagattgc gcacccggta cccgtctcga gtcagcacaa
     1381 ccatctcacc gtcatccaga tacaccaccg cccgggtgtg ctccaagagc ggtgaggcat
     1441 cggacgccac gaaaaattcg ttctcgccga caccgaccag gagcggagaa ccattccggg
     1501 ccgctacgat gacgcccggc tcctcggagg agatgaaggc aagcccatag g
//
LOCUS       DASRPQ010000208         1291 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1589101, whole genome shotgun sequence.
ACCESSION   DASRPQ010000208 DASRPQ010000000
VERSION     DASRPQ010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1291
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1589101"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1252)
                     /locus_tag="VFD73_02470"
     CDS             complement(<1..1252)
                     /locus_tag="VFD73_02470"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZI72883.1"
                     /translation="MRRTTGVSHGREVPLLPILSLLRDYFSITEEDDPGQGREKIARP
                     LLDLDPALEDTLPLLYDLLEVPDPAHPIAALAPKVRMRRIFEALHRVIQQRSDREVLV
                     LVVDDLHWFDPQSEVFLDRLVESFPGSKTLVIANFRPEFSVGWMRHSYYRQLPLAPLS
                     SKAVAEMLGGLLGVDLSLVALLKFVQERTGGNPFFLEEMVRALVEDGTLTGGTGSYRL
                     TRPLHEVQVPPSVQAVLAARIDRLPIEHKAILQTAAVIGRTFAEPVLAMVTGSAHETL
                     QDALIALRAAELLQAEGNLPVVEFRFWHPLTQEVAYRSLLSDRRARLHAAVAKALLEH
                     DPARSGERAAVLAWHWERAGQKLEAARWNVRAGTWAVRTDITEARRRWQVAINLLMEV
                     DEGAESLELNVRAHIRLLQFGARTG"
BASE COUNT          246 a          388 c          435 g          222 t
ORIGIN      
        1 tcccggtacg ggccccgaac tgcaaaagtc gaatgtgagc gcgtacattc agctcgagac
       61 tttcagcgcc ctcgtcgact tccatcagga gattgatggc tacctgccag cggcggcgcg
      121 cttctgtgat gtcagtgcga actgcccagg tgccggcccg gacattccac cgggccgcct
      181 ccagcttttg gccggcccgt tcccagtgcc acgcaagcac tgcggcccgc tcgccggaac
      241 gggcggggtc atgctcgaga agggccttgg ccaccgccgc atgcagccgc gcccgccggt
      301 cggaaagaag gctgcggtag gccacctcct gggtgagcgg gtgccagaag cggaactcga
      361 cgactggaag gttgccttct gcttggagga gctcagcagc gcgcaaggct atgagggcat
      421 cttgcagcgt ttcgtgcgcg gaccccgtca ccatggccag aaccggctcg gcgaatgtgc
      481 gcccgataac agcagcggtt tggaggatgg ccttgtgctc aatggggaga cggtcgatgc
      541 gagctgccag tacagcctga acgctgggag gcacttgcac ttcgtgaagg ggccgggtga
      601 gacggtaact tccggtgccg ccggtaaggg taccgtcctc gaccagggcg cgcaccattt
      661 cttcgaggaa gaagggattg ccgccagtac gctcctgaac gaacttgaga agtgcgacca
      721 gggataggtc gactccgagc agcccgccca gcatttcggc caccgccttg ctcgagagtg
      781 gagcgagagg caattgacgg taatacgagt ggcgcatcca gccgaccgag aactcgggac
      841 ggaagttggc tatgactagt gttttggagc cgggaaagga ctccaccagt cgatccagga
      901 agacttcgct ttgcgggtcg aaccagtgca ggtcgtccac caccaggaca agcacctctc
      961 gatcgctacg ttgctggatc acccggtgca gcgcctcgaa gatccgccgc atacgcacct
     1021 tcggtgccag cgcagcgata gggtgagcgg ggtctgggac ctccagcaag tcatagagga
     1081 gcggaagggt gtcctcgagg gctggatcga ggtctaacag gggccgggca atcttctccc
     1141 ggccctggcc gggatcgtct tcctcggtga tcgagaagta gtctcgtagc aggctcagaa
     1201 tcggtagcaa cgggacctcc cggccgtggg agacgccggt ggtccgccgc acagtgatcc
     1261 ctcgggcggt ggtggagcgg gcaaactcct c
//
LOCUS       DASRPQ010000209         1358 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1275880, whole genome shotgun sequence.
ACCESSION   DASRPQ010000209 DASRPQ010000000
VERSION     DASRPQ010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1358
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1275880"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..376)
                     /locus_tag="VFD73_02475"
     CDS             complement(<1..376)
                     /locus_tag="VFD73_02475"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HZI72884.1"
                     /translation="MATVRGQFDKVSGSVVIDPLNPAESRIHAVIDAASIDTREPQRD
                     AHLRSPDFLDVEQFPTIEFRSTRVARTKDGYAVPGDLTIHGVTRSVILAVEATDDEIR
                     DHVGNVKRAATATTKINRKDFGL"
     gene            586..939
                     /locus_tag="VFD73_02480"
     CDS             586..939
                     /locus_tag="VFD73_02480"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI72885.1"
                     /translation="MKSGDHEFCPVYASIELLQEKWNLHIIRALLEGPMGFNDLGRAC
                     GANPSTLAQRLERLEAAGVVERTVHSVMPPRTSYALTGAGRGLQDVIEAIDRWGKQHL
                     QAALEAKREAAAASA"
     gene            complement(945..>1358)
                     /locus_tag="VFD73_02485"
     CDS             complement(945..>1358)
                     /locus_tag="VFD73_02485"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI72886.1"
                     /translation="NLLVDPAGFLKVMDFGIARLAERRPDTGEALTAVGVVVGTPQYM
                     APEQLFGESVDQRTDLWATGAVLFECVTGRLVFDPPSLSELGAFHLNRKPPDPSSLNA
                     DVSVEFSRIILRALAHRPADRWQTAAELLKALEAV"
BASE COUNT          252 a          440 c          427 g          239 t
ORIGIN      
        1 tcagcccgaa gtccttgcgg ttgatctttg tggtcgcggt cgccgcccgc ttgacgttcc
       61 cgacgtgatc ccgaatttca tcgtcggtgg cctcgacggc gaggataacg gagcgggtca
      121 cgccgtgaat ggtgagatcg ccggggaccg cgtacccatc cttggtgcga gccacccggg
      181 tgctccgaaa ctcgatggtc gggaattgct cgacgtccag gaaatcggga ctgcggaggt
      241 gcgcgtcccg ctgaggctcg cgagtgtcga tgctggcggc gtcgatgacc gcgtggatcc
      301 tcgactcagc cgggttgagt ggatcgatga ccactgaccc tgagaccttg tcgaactgcc
      361 ctcggaccgt cgccaccacc aagtgcttga ccgagaaatg gaccccgctg tgggcggagt
      421 ctatgctcca agttgtttta ctttcagcag ttatcgcgga tgacatcgcc aactccattg
      481 ctggggtgaa ccggtgctgt cgactgactg acgctatact atagcaagca ctataaaaaa
      541 gcaagtgctt gaacaaatat actgccagcc ttagatttgg tccccatgaa gtccggcgat
      601 cacgagttct gccccgtcta cgcttccatc gagctcctcc aggagaagtg gaacttgcac
      661 atcatccggg ccctgctcga gggcccgatg ggcttcaacg atctcggccg tgcttgcggc
      721 gccaacccgt ccaccctcgc gcaacggctg gaacgcctgg aagccgccgg ggtggtcgag
      781 cgcaccgtcc actcggtcat gccgccgcgc accagctatg ccctgacggg cgctgggcgt
      841 ggactgcagg acgtgatcga ggcaatcgac cggtggggaa aacagcacct gcaagccgcc
      901 ctggaggcca agcgcgaggc agctgcggcc agcgcctgac cgcctcagac ggcttcgaga
      961 gccttgagca gctccgcggc tgtctgccac cggtcggcgg ggcgatgggc cagcgcgcgg
     1021 agaatgatcc gggagaactc caccgacaca tccgcgttga gcgaggacgg atcaggcggc
     1081 ttgcggttca ggtgaaacgc gcccagctcg ctgaggctgg gcggatcgaa cactagccgg
     1141 cccgtgacgc actcgaacag caccgcgcca gtagcccata gatcggttcg ctgatccacc
     1201 gattccccga acaactgctc gggcgccatg tactgcgggg tgcccacgac cacccccacc
     1261 gctgtcagcg cctcgccggt atcgggccgg cgctccgcca gccgagcgat cccgaagtcc
     1321 atgactttga gaaagcccgc cgggtccacc agcaggtt
//
LOCUS       DASRPQ010000210         1024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3165726, whole genome shotgun sequence.
ACCESSION   DASRPQ010000210 DASRPQ010000000
VERSION     DASRPQ010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3165726"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..182
                     /locus_tag="VFD73_02490"
     CDS             <1..182
                     /locus_tag="VFD73_02490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72887.1"
                     /translation="LRVSFAAFLIATVGWALVHPRKPAAGGRSATGSSTEPGTHLQAV
                     LHRPAPGAEGRNAPT"
BASE COUNT          190 a          339 c          338 g          157 t
ORIGIN      
        1 ccctgcgggt cagtttcgcc gccttcctga tcgcaaccgt gggctgggct ctggtgcacc
       61 ctcggaaacc agccgcaggc ggtcgctcag cgacgggaag cagcacagag ccgggtactc
      121 accttcaggc cgtcctgcac cggcccgcac ccggagcgga gggacgcaat gcgccaacat
      181 aggcctcccc tccgcctccg caccactgga caacccagcc tcgagcgcac tgatgcagga
      241 gcccttgcgg atcgcggccc acccgccccg gactgatctt gcaccgcgag gaagatcact
      301 accttcaaag ttgaaggccc cggctctgcc ggtgccgggg gcggaggaga tcagcacgaa
      361 cgaatcgtgc gagcctcggc cgctgatggc gccgatcccg gccaggagca acccgtcacc
      421 cggcgcgagc gcgaccacca ggtgctcctg ctaaagtcca gacaggccgg gccagggcaa
      481 gacgacgatg cccaagcgga aatcactcac cccggttggc gggaagaaac agaaccagcc
      541 ccatcggttg gcggggttcc gtgaagaggc tgcgaacaga cacgcgctca acgcagagca
      601 gccgcagaaa tcacatcacc ctcggtgact ttgcctggtc agcgctagtg cgcaagtagc
      661 cgccgatctg atcgggcgat gatcgcgtct gctccgcgca cgtggccgcg cgcaactggt
      721 agttctggct ggcttttagc cggtgctgaa ctcgcctgcg catactggaa gggacggtcc
      781 ggaaagctag cgtgcgctct tcaggcagcg cctgtgagtc cggccacggc cgggagctgc
      841 ctgtctctgg cactcggccg gcaggccccg ttgtcagggc actccttcat agtggcggcg
      901 cgtcgggagc cagaaccggc ggtcgcgcct gtggtcagtg gcaaaggcgg ccagctgaac
      961 aggagatcaa ggccggttcg gtagtgggtc agtttggatg ttgatcttga taccgcaagg
     1021 cggg
//
LOCUS       DASRPQ010000211         1252 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_649523, whole genome shotgun sequence.
ACCESSION   DASRPQ010000211 DASRPQ010000000
VERSION     DASRPQ010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_649523"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..487)
                     /locus_tag="VFD73_02495"
     CDS             complement(<1..487)
                     /locus_tag="VFD73_02495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72888.1"
                     /translation="MSLPTPSETVGKLQTSLQAKAKAEPAFRFYALWDKVCRKDVLLE
                     AYARCRANAGAPGVDGETFEQIEAHGRERWLETLREELVSGRYTPQPLLRVWIPKSNG
                     GQRPLGIPPIRDRVVEMATVLIIGPIFEADLLPQQYGFRPGLDAKMALRRVYWHVTQH
                     GR"
BASE COUNT          194 a          431 c          358 g          269 t
ORIGIN      
        1 gtcggccatg ttgcgtcacg tgccagtaga cccgtcggag agccatcttg gcatccagtc
       61 cggggcggaa gccgtactgc tggggcagta agtccgcctc gaaaatggga ccaatgatca
      121 gcaccgtcgc catctcgacc acgcggtcgc gaattggcgg gatgccgagg ggccgctggc
      181 ctccgttgct cttcggtatc cagacgcgca gcaggggctg aggggtgtag cgtcccgaga
      241 ccagctcctc ccgcagcgtt tccagccatc gctctcgacc gtgagcctcg atctgttcga
      301 acgtctcccc gtccaccccc ggcgctcccg cattggcgcg gcagcgggcg taggcttcca
      361 ggagcacgtc cttgcggcag accttgtccc agagggcata gaagcggaag gctggttcag
      421 ccttagcttt cgcctgcagc gaggtctgca gcttcccaac cgtttcagac ggcgttggta
      481 gactcatcgt caatcaccgg gctgtcggcc cttccctcgc ctggggcggg acagggctcc
      541 ttccctccgc cggcattacc cggcctcgtc ggtgtcgggt cggaggaggc gcgctcgatt
      601 gctctcgcgc tggcctccgt ccgccgctca aactggacgt gcagttttcc cgcatccagc
      661 tttcacgaaa gcgttttatt tgagcgacgc gagaaggggt catgcagcga ggtctgacgt
      721 gttcgaggtt ggcatcctcg gacatacagc cagcgatgta tatctcgccc atgagcgagt
      781 gaaccttctt cgcctcccgt cgattcggtc cagtccacga gtctcctcgg ccggtgaggt
      841 tcgggtcttt cgctaaagga actatcctcc tcaccagctt tactcatctc gtcttccggc
      901 tctcctcgac cgccttcgcc ggccggcttc cccagcacac tctgctgcca catacatggt
      961 cgtgcggctt tcaccgcact tgaggtacta cccagccgtc cgacgactcc cagaacgccg
     1021 cttcccactt cgcttgcgct tatagggtca cttccctcgg tgcctcccga ggatcctgag
     1081 agccctcctg gggtcacgct cagatcttcc ataccgtgcc gtccgcaaac accttggtgc
     1141 ggtgggtgga tgagaaacgc cttcgcctcc atagtgcagg ctcgaccttg ccccaccttt
     1201 ggccgaccgg ttcgtccttg gggtagcccc catcgactac agcccggtac tt
//
LOCUS       DASRPQ010000212         1554 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3470072, whole genome shotgun sequence.
ACCESSION   DASRPQ010000212 DASRPQ010000000
VERSION     DASRPQ010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3470072"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1027)
                     /locus_tag="VFD73_02500"
     CDS             complement(<1..1027)
                     /locus_tag="VFD73_02500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72889.1"
                     /translation="MKPTSESLGLTHRVAALVGSIASRPKALRADKFLSIFGAALTVG
                     LALVVYPRQPDIGFAILVLLGGAAGWLLAGRVAGLICLGEVIALAGCVRSGIVPWPTG
                     LVQIGIVISLTWLAHVAAERELSARRNAADQRRLDGLTLLLETAESLARESDRDTILR
                     TAVWAAARGVSRSGNGRSAHAAFHEVIGEQSRIVVVADEATEQEVATGFEYPIARNQA
                     ARAAIRIGKPALVRPDHLSGPLRELSDRLGWQVLIMAPVYSARSLHGLLAASARDGPA
                     VDQFQQYMLGALARLTSASLDSAAAKQERLLAMARNSAEVVAGPGLLPDIVGELHEAL
                     KPIKEHIL"
BASE COUNT          299 a          501 c          498 g          256 t
ORIGIN      
        1 caaggatgtg ctccttgatc ggcttgaggg cttcatgcaa ttccccgacg atgtcaggga
       61 gcagccccgg tccagcgacc acttctgcac tattccttgc cattgccagg agtcgctcct
      121 gcttggccgc ggcggaatca aggctcgcgc tcgtcaagcg ggccagggcg cccagcatgt
      181 attgctgaaa ctggtcgacc gccgggccgt cacgggcgga cgccgcgagc aacccgtgca
      241 gtgaccgggc gctgtagacg ggcgccatga tgagcacttg ccagccgagg cgatcggata
      301 gctctcgcaa agggccgctg aggtgatctg gacggacgag cgccggctta ccgatgcgga
      361 tggcagcgcg tgctgcctga tttctggcga tcggatattc gaatccggtc gctacctcct
      421 gttccgtcgc ttcatccgcg accaccacaa tcctgctctg ctcgccgatg acttcgtgga
      481 acgcggcgtg tgcggatcga ccgttacccg atctagaaac tccgcgagct gcagcccaca
      541 ccgcggtcct caggatcgta tcgcgatccg actctctggc cagggactcc gcagtctcga
      601 gcagcaaggt caatccgtcc agtcgccgtt ggtcggcggc gttgcggcga gcactcagct
      661 ctctctccgc ggcaacatgg gcaagccagg tcaaggagat cactatcccg atctggacga
      721 ggccggtcgg ccacggcacg atgcccgacc ggacgcatcc ggccaaggcg atgacttcgc
      781 caaggcagat caggccagcg actcggcctg cgagcagcca gccggcggcc cctccaagaa
      841 gaaccagaat ggcgaacccg atgtccggct ggcgggggta gacgacgagc gccaacccca
      901 ccgtcagagc ggcgccaaat atggacagga acttgtcggc ccgcaaggct ttgggtctgg
      961 aggcgattga gccaaccagg gcggccaccc gatgggtcag gccgagcgat tccgaggttg
     1021 gcttcacccg actgaaccga gccgcagcct ggccgacggg ggaaccctcc accacacctt
     1081 ggcccggaaa tccggcccct cgcccggcat tttcgtgtcc cccctcatcg ctcgtcgtcc
     1141 cgtgttcgag catatgccga ccgtgccgga tttgagcttg attagcgcac gaaacacccg
     1201 ggtcggctgc tcctgtcagc tggtgtgaaa ctgcccagat ggcaccggtt tcccagcctt
     1261 gtgaggtacg ggaggttcct cccgtcggtc ttcgcgtcgg aggagaagga actgacggcg
     1321 ttggcgacgt tgcaaagggc ggccaacggc gcttgactcg aacgaagagg acgatcacag
     1381 tgacgattgg ggagaccgag gaggaccaaa cggagaacaa gaggtccacg gcgaggcggt
     1441 cccagaatga tcgccggggc aaagagcgca gggtggaacc ccacagcgct ctcacgaccc
     1501 ttgcgcgtgc caatgaagcc atcgcgttgg agcgccgagg agcattccga cgaa
//
LOCUS       DASRPQ010000213         2391 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_649579, whole genome shotgun sequence.
ACCESSION   DASRPQ010000213 DASRPQ010000000
VERSION     DASRPQ010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2391
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_649579"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            309..1190
                     /locus_tag="VFD73_02505"
     CDS             309..1190
                     /locus_tag="VFD73_02505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72890.1"
                     /translation="MKTQPFGALLGSAIVVSLALACERGDSPAAPAASSAPAASRINP
                     FSPHVGLSAGAEHDEQTGCTLASLTGTYGVQRMGFTTQGRLTAVGITTFDGQGNSLAT
                     ETISRNGVVSVAQSPSAYTVAPDCTGTLTVNGAIVAHLLIVHQGTGVLGMSLTPGDNV
                     SSHYERVVDRPDDAGCTNASLTGTYGFQRMGQNPQGPVTALGIGTFDGQGSDVASQTT
                     SRSGVFSDQQPFVSFYTVNPDCTGTAILNGSAFAYFVIVHGGSEVLGMALNPGLNVAV
                     HYERLVDRPGHGPEGAR"
     gene            1345..>2391
                     /locus_tag="VFD73_02510"
     CDS             1345..>2391
                     /locus_tag="VFD73_02510"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZI72891.1"
                     /translation="MEARQQSLCVIRFGDFEVDQRAGELRRHGTKVKLQQQPFRVLVR
                     LLERPGELVTREELREAIWAPGTFAEFDGGLDATIHKLRSALGDSAEHPRFVETLPRR
                     GYRFIGGAVEVVTPKARAQHRWVRRWPIVLTAGLTGLIALGLAAKFVLRDRLSSRGIA
                     ERIQSIAVLPLRDLSGDSAQAYFAAGMTEALVTRLGKTSGLRVISLTSAMSYQGTRVT
                     LPTIARQLNVDAVVEGAVLREGNRVRVTAQLVEASSDRHVWAETYEGGLQDVLELQDE
                     IARAITTEVLARVSAPAGGTLSSNRARPVNPDAYDLYLKGRYEWNDWTEQGLKRSIEY
                     FEQAVQKDPSYAPAW"
BASE COUNT          453 a          718 c          799 g          421 t
ORIGIN      
        1 tcgcgccatc gctggtcctg ctctcccaga gaattgtcga gcggtggctt ctgcaacccg
       61 tgtggggcct tttctttcag ccggcaatga tggtgccgaa cgtcaagtcc cagcacgggc
      121 gcaatccgat gtgaccgacc actcagatcc tcgcgtagtc cagcctgttc cagccgggtc
      181 atcgggtaag gtgcaggtga gctacaagtg aggggcgggc cattgaccta cgcggctccg
      241 cgcgagaaca gtgacctgat atatggcccc gaaggcactg agaccgcgtg acgccgctag
      301 gaggtaccat gaaaacgcag ccattcggcg cactgctagg aagcgctatc gtcgtgagcc
      361 tggcgttggc atgtgagcgg ggggactcgc ctgcggcacc ggcagcgtcc tcggcgcccg
      421 cggcgtctag gatcaaccct ttctcccctc acgtcggtct gtcggcgggc gcagaacacg
      481 acgagcagac aggctgcaca cttgccagcc tgactggcac ctacggcgtc cagaggatgg
      541 ggttcaccac ccagggccgg ttgaccgccg tagggattac cacgtttgac ggtcagggca
      601 acagcttggc gaccgagacg ataagcagga acggcgtcgt tagtgttgcg cagtccccct
      661 cagcttacac cgtggctccg gactgtacgg gcacgcttac cgtgaacggc gccattgttg
      721 cgcacctcct aattgttcac caaggcaccg gggtgttggg catgagtctg actccgggag
      781 acaatgtgtc gtcgcactat gagagagtcg tagaccggcc cgacgatgca ggatgcacga
      841 acgcgagcct gacaggcacc tacgggttcc agaggatggg gcagaacccc cagggcccgg
      901 tgacggccct cgggatcggc acgttcgatg gccagggcag cgacgtggca agccagacca
      961 ctagcagaag tggcgtgttt agtgaccagc agccattcgt gtccttctac acggtgaatc
     1021 cagactgtac gggcacggcg atcctgaacg gcagcgcatt tgcgtacttc gtgattgttc
     1081 acggaggcag cgaagtgctg ggcatggcct tgaatccggg actcaacgtg gcggtccact
     1141 acgagagact ggtagaccgc cccgggcacg ggcccgaggg agcgaggtaa ccctggagcg
     1201 aggtggtgag atcggcgagc gtgccgtagc agacggggct cttgcgtaag catttggaat
     1261 cgaaagactt acggcgagag ctgatccgcc gtggtctcgc ttgcatcgag cgatatgtta
     1321 ggcctgggcc cttgaggatg ctcgatggaa gcgcgccagc aatccctttg tgtcatccgg
     1381 ttcggtgact tcgaagtcga tcagcgcgcc ggtgagctcc gcaggcatgg aacgaaggtc
     1441 aagctgcagc agcaaccatt tcgcgtcttg gtgcggctcc tggagcgccc cggcgaactg
     1501 gtgacccggg aggaattgcg ggaagcgatt tgggcccccg gcacgttcgc tgagttcgac
     1561 ggaggcctcg acgcaacgat tcacaagctc cgcagcgcac tcggtgactc ggccgagcac
     1621 cctcgattcg tggagaccct gccacgccgc ggctaccgat tcatcggagg cgccgtcgag
     1681 gtggtcacac cgaaggcgcg agcccagcac cgctgggtca ggcgttggcc gatcgtcctc
     1741 acggcgggac tgaccgggct gattgcgcta gggctcgccg ccaagtttgt cctgcgcgat
     1801 cgcctgagta gccggggcat cgcggaacga atccagtcca tcgctgtctt gcccctccgc
     1861 gacctctcgg gcgactctgc ccaggcctat ttcgcggcgg gcatgactga agctctggtc
     1921 acgaggctcg gtaagacaag cggcctacgg gtgatctcgc tcacgtcggc catgagttac
     1981 cagggcacgc gcgtgaccct gcccaccatt gcgcgccagc tcaatgtgga cgccgtggtg
     2041 gaaggagcgg tgctgcgtga aggcaaccgg gtgcgcgtga cggcgcagct ggtggaggca
     2101 tccagtgacc gccacgtttg ggcagagaca tatgagggcg gcctgcaaga tgttctcgag
     2161 ctgcaggacg agatcgcccg ggcgatcaca acggaagtcc tcgcgagggt ctcagcgccg
     2221 gcgggcggta cgctgtcgag taaccgcgcc cgcccggtga accccgacgc ctacgacctg
     2281 tatctcaagg gtcgttacga gtggaacgat tggactgagc aaggtctcaa gaggagcatc
     2341 gaatacttcg agcaagccgt tcagaaggac ccgagctatg caccggcgtg g
//
LOCUS       DASRPQ010000214         1805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1589843, whole genome shotgun sequence.
ACCESSION   DASRPQ010000214 DASRPQ010000000
VERSION     DASRPQ010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1805
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1589843"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..798
                     /locus_tag="VFD73_02515"
     CDS             <1..798
                     /locus_tag="VFD73_02515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72892.1"
                     /translation="TTSVQTDSAFLPQNLVVTVPIPDSVKTGVVRTLLQGPDLAKVAI
                     APADSGVLALGVRLIAPLPTGVRLGAIGSTAPVFVTYATLDVPDTGTAKLRSFPLSPS
                     FSTFLPPIQQSDDSTLLNVGGEPSARVLMRFALPARLRDSATIVRATLELTPVAPING
                     LATDPLRLQGRAIVADLGAKSPVNTSRVVADTIVAGTSGTVSLEAVRLVQLWAPGTPT
                     ALLLSVAPDQEAASFSRPSFYSTRAADPALHPRLRLSYMLSFPFENP"
     gene            810..>1805
                     /locus_tag="VFD73_02520"
     CDS             810..>1805
                     /locus_tag="VFD73_02520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72893.1"
                     /translation="MTRIWLFLLLPTALQAQSSQFGVRGLGYPGREMATRAAASGGAF
                     ALFDPESSVNPAALGGIPVLTSIFTIQQNFMTQDNPAGSASTRDTRFPQLMVVGPVRQ
                     TGVALGFSYSNYTSRDFSIASQSTIDLRGIPVGITDSFSSRGGLSDLRLAGSYRIHDR
                     WMLGGAFHILTGSNRLRSRRLFADSSYLASLQQSEVSYAGIGLSLGVIRQFGPQFAVA
                     AMVRSDGHLNVDRDSTRVGRVDLPYSFGFGLRWQATSKLDLAAHSMYRTWSAANSDLL
                     AQGGTGSDNTLELAVGANYTRNLKRPFRWPFRVGARYARLPFPLLPGNRPHEVGVS"
BASE COUNT          292 a          593 c          538 g          382 t
ORIGIN      
        1 acgacctcag tccagaccga ttcggcgttc ttgcctcaga atctcgtggt cacagttccg
       61 attcccgact cagtgaaaac cggcgtcgtg cgcacgctgc tgcaaggtcc tgatctggca
      121 aaagtcgcta ttgcccctgc cgactccggt gtcctcgcgc tgggcgttcg tctcattgcc
      181 ccacttccga ccggcgttcg cctgggagcg atcggatcca ccgcccccgt gttcgtgacc
      241 tatgccacgc tcgacgtgcc cgataccggt acggccaagc tacgctcatt cccattgtcg
      301 cccagcttca gcaccttcct acccccgatt cagcagtccg acgattccac cctgctcaat
      361 gtcggcggag agccttcggc ccgagtgctg atgcgattcg ccctgccggc gcgcttgagg
      421 gattcggcaa cgatcgtgcg cgcgaccctg gagttgacgc cggtcgctcc catcaacggc
      481 ctggctaccg atccgctgcg gcttcaaggc agagcgatag tggcggacct gggagcgaaa
      541 tccccggtga acacctctcg tgtcgtcgca gataccatcg tagcgggcac cagtggaacg
      601 gtgtctctgg aggcggtccg gctggtgcag ctctgggctc ccgggacgcc cacggcgctg
      661 ctgttgtcag tggcgcccga ccaggaggca gccagctttt ctcggccgtc gttttactct
      721 acccgagcgg cagaccccgc gctccacccg aggctccggc tgagctacat gttgtccttt
      781 ccgttcgaga atccttgatg ggccgccgaa tgacgcgtat ctggctgttc ctcttgctgc
      841 cgactgcgct tcaggcgcaa tcgtcgcaat tcggcgtgcg cgggctgggc tatcccggga
      901 gagaaatggc aactcgggca gcagcaagtg gcggcgcctt tgctctgttt gatcccgagt
      961 cgagcgtcaa tccggcagcg ctcggtggaa ttcctgtctt gaccagcatc ttcaccatcc
     1021 agcagaactt catgacgcag gacaacccgg cgggctcagc ctccacccgg gatacccgat
     1081 tccctcagct gatggtggtc gggccggtgc ggcagaccgg agtggcactg gggttcagct
     1141 attcgaatta caccagtcgt gacttcagca ttgccagcca gagtactata gacctccgcg
     1201 gaattccggt gggaatcacc gattccttct cgtcgcgtgg cggtctgagc gatcttcgtt
     1261 tggcagggtc gtaccggatc cacgatcgtt ggatgctcgg gggggcattt cacattctca
     1321 ccggctccaa tcgcctccgt tcgcgcagac ttttcgccga ttccagctac ctcgcgagtc
     1381 tccagcagtc ggaggtatcg tatgcgggaa tcgggctctc gctcggtgtc atccgacagt
     1441 tcgggcccca gttcgcggtg gcggcgatgg tgcgatccga cgggcacctc aatgtagatc
     1501 gggactcgac cagggttggc cgagtagatc taccgtacag cttcgggttc ggccttcggt
     1561 ggcaagcaac gtccaagctt gatctggccg cgcattcgat gtaccggacc tggtcggcgg
     1621 ctaacagcga tctgctcgcc cagggcggca ccggctctga caacactctg gagctcgctg
     1681 tcggggccaa ttatacccga aacctgaagc gtcccttccg ctggcctttt cgggtcggtg
     1741 cacgatatgc ccggctaccg tttccgctgc tgccgggaaa tcgcccccac gaggtaggcg
     1801 tctcc
//
LOCUS       DASRPQ010000215         1403 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2215507, whole genome shotgun sequence.
ACCESSION   DASRPQ010000215 DASRPQ010000000
VERSION     DASRPQ010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1403
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2215507"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..889
                     /locus_tag="VFD73_02525"
     CDS             <1..889
                     /locus_tag="VFD73_02525"
                     /inference="COORDINATES: protein motif:HMM:NF014273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HZI72894.1"
                     /translation="GEGFGILGRLAEGHERGSRPPVAENLMSKIVLSTSRDIPLNKLV
                     LSQANVRRIKASVSVDELAEDIARRGLLQSLSVRPVRDGHGQETGTFEVPAGGRRFQA
                     LQLLVKQKWLAKTAPVPCLVKTDGVAEEDSLAENTMREALHLLDQFRAFQVLRDEHGL
                     GDEEIAARFFVIPAVVRQRLKLVAVSPKLLDLYAANAMSLEQLMSFTVMNDHARQEQV
                     WEGLARGYNKEPYLAWCTDRLAGAEELSGVGERPCPAPGCRSCRSSSTRTAATIFRAS
                     GARLRTGRPTTPTYVSAAA"
     gene            781..1059
                     /locus_tag="VFD73_02530"
                     /pseudo
     CDS             781..1059
                     /locus_tag="VFD73_02530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012881221.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(1059..1331)
                     /locus_tag="VFD73_02535"
     CDS             complement(1059..1331)
                     /locus_tag="VFD73_02535"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI72895.1"
                     /translation="MLGLDSAGWHTAPNLVVPEGIRLAYLPPYSPELQPAEHLWPILD
                     EPLANRYFATLADLERTIADRCRVLEGDQLSLGTNFHWWPKPATPS"
BASE COUNT          244 a          432 c          500 g          227 t
ORIGIN      
        1 gggagagggg ttcgggatct tgggtcgact ggcagaaggg cacgagagag gctcgcgccc
       61 gcccgtcgcg gagaacctca tgagcaagat cgtgttgagc acgtcgcgcg acatccccct
      121 gaacaagctc gtgctgagcc aagccaacgt gcgccgcatc aaggccagtg tgagcgtgga
      181 cgagctggcc gaggacatcg cccggcgtgg tctcttgcag tccctgagcg tgcgacccgt
      241 gcgggacggg catggccagg agacgggcac gttcgaggtg ccggcgggcg ggcggcgctt
      301 ccaggccctg cagctcctgg tcaagcagaa gtggctggcc aagacggctc cggtgccctg
      361 ccttgtgaag acggacggcg tggcggagga ggacagtctc gccgagaata cgatgcgcga
      421 agccctgcac ctgctggatc agttccgggc tttccaggtg ctgcgcgacg agcacgggct
      481 gggggatgag gagatcgcag cccggttctt cgtcatcccg gcggttgtgc gccagcgcct
      541 caagctggtt gcagtcagcc cgaagctgct cgacctctac gccgcgaatg cgatgagcct
      601 cgagcagctg atgtccttca ccgttatgaa cgaccatgcc cgtcaggagc aggtgtggga
      661 gggcttggcc cggggctaca acaaagagcc gtatttagcg tggtgcacgg atcggttggc
      721 tggtgctgag gaactgagtg gcgtaggaga gcgcccctgt cctgcccctg gatgccgatc
      781 gtgccgttca agctcaacca ggaccgccgc caccatattc cgcgccagcg gcgcaaggtt
      841 acgaactggc cggcctacga cgccaactta cgtcagcgcg gcagcctgac ggcgtggttc
      901 accgtggagg cggtcgaagc gtgggcggcc gaaccccgga cgacccgggg cgggcagccc
      961 tggtattcgc ccctggcgat cctgacgacg ctgaccttgc gcgctgtgtt ccgcctggcg
     1021 ttccggcaga ccgaaggcct gatacgatct ccggctgatt agctcggggt ggctggcttg
     1081 ggccaccagt ggaagtttgt cccgagactg agctgatcgc cttcgaggac ccggcaacgg
     1141 tctgcgatcg tgcgttccag atcagcgaga gtcgcaaagt agcggttcgc gagcggctca
     1201 tccagaatgg gccagaggtg ctcggcgggc tgaagctcgg gcgagtacgg gggcaagtag
     1261 gcgagccgga tcccctccgg cacgaccagg ttgggcgcgg tgtgccagcc ggcgctgtcg
     1321 agcccgagca cgatgatacg atcccgtccc gccccagcct cacgcgcaaa cagcgccagc
     1381 cgcgcggcaa agaatggctt cga
//
LOCUS       DASRPQ010000216         3896 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1590040, whole genome shotgun sequence.
ACCESSION   DASRPQ010000216 DASRPQ010000000
VERSION     DASRPQ010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3896
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1590040"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..715)
                     /locus_tag="VFD73_02540"
     CDS             complement(<1..715)
                     /locus_tag="VFD73_02540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72896.1"
                     /translation="MPDIKLIGLPAQDTPPDLQTGAGHRRQIPADLLRQASRRLETLA
                     LVGAALWILGPAFGHLALALTEPDNPRWSQFGATETIATAGFVISLLVFGFSRSRERN
                     PKLVMDIGLAYMVACAACIGAMIHWDLATGAPRGTDPMITWTPAVILIFAALLPAPPW
                     KMAVAGFIAASMDPLGMITAQAAGEYHFGPLRNAFLMHYPNYLLLGVAVVISHVVTRL
                     GRQVAKEREMGSYRLGELLG"
     gene            complement(724..1656)
                     /gene="ligD"
                     /locus_tag="VFD73_02545"
     CDS             complement(724..1656)
                     /gene="ligD"
                     /locus_tag="VFD73_02545"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF045432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HZI72897.1"
                     /translation="MAGIAGVIRVDGREIEISRSEKVLFPDDGITKGELIEYYARIAA
                     RMLPYLRDRPLTLERYPNGIKTKRFFQKEVSSYFPKWIRTVTVQKVGGSVTHVVCNDT
                     ATLVYIANQACVTPHIFLSRIDKINVPDQLVFDLDPQGDDFEVVKATALAFKQLLDEL
                     ELPAFLKTTGSRGLHVVVPLQRRESYDSVREFGRELAEIIVSQAPKARTMEQLKANRG
                     NRVFIDTNRNGYAQLVAPAYAVRARNGAPVSVPLDWGELGKKGLRANSFTIRNVFARF
                     QKVNDPWRDFWRSGASLAGARRKLKRRTSFRSVP"
     gene            complement(1717..2520)
                     /locus_tag="VFD73_02550"
     CDS             complement(1717..2520)
                     /locus_tag="VFD73_02550"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZI72898.1"
                     /translation="MSLKGKFALITGGSRGIGRGIALKLGAQGVRIGVHYYRNDKAAK
                     ETLTAIRQTGSDGTVLQADLTRPDQVTRLFQQVRNEFDRLDIFVSNARPEASEFFVPP
                     LEITLEQWNSAINSQATAFLIGVREAARLMVDNGRIIAITYAPGGRTGGLQPWVAMGA
                     AKAALETLVRYFAVALAQRGITVNSVSPGWTEDSVLNSLPDAVQRAIGDWHKRGWTPM
                     RRLGTPADIGNIVALLCREEAAWITGQLISADGGSSLMNAEVPPDLQLA"
     gene            2731..3246
                     /locus_tag="VFD73_02555"
     CDS             2731..3246
                     /locus_tag="VFD73_02555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72899.1"
                     /translation="MDDRLIMIILRLIHILAGIFWVGTALVVAAFLVPTMRETGREGG
                     RVIQHLMVQRRLQLFIVITMALTILSGITMYARWEAATHGTWAGTAPGIGYGIGGAAA
                     ILGALAGGLISAAAGRRLGEIGQGIGSGVPSAEQQAEMAKLQTRIAVGTKLSSALLLV
                     AAGAMSIARYL"
     gene            3327..>3896
                     /locus_tag="VFD73_02560"
     CDS             3327..>3896
                     /locus_tag="VFD73_02560"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI72900.1"
                     /translation="MGEIPPSLAAALAERYVIEREVGAGGMATVYVAQDLRHKRRVAI
                     KVMRPELGGPDGVERFLREIDLAAGLQHPNILSVFDSGAVEQNGGTPLPYFVMPYVEG
                     ETLRGRLQRERRLPLATAATLAAEVADALAYAHRHGVVHRDIKPENILLSGGHAMVTD
                     FGVAKALVSSTAPTGLGDATRLTRAGIAIG"
BASE COUNT          711 a         1202 c         1235 g          748 t
ORIGIN      
        1 gtcccagaag ctcgcccagt cgataactcc ccatctcccg ttccttggcg acttgccttc
       61 cgaggcgggt gacgacgtgg gagatcacca cggctacgcc gagcaggagg tagttgggat
      121 agtgcatcag gaaggcgttg cgaagcgggc cgaagtggta ctctcctgct gcctgagcgg
      181 tgatcattcc caacggatcc atcgatgccg caatgaagcc cgcgaccgcc attttccagg
      241 gaggggccgg cagcagtgca gcaaagatca agatcacagc gggtgtccag gtgatcatcg
      301 gatcggtgcc ccgcggcgct cctgtcgcta agtcccagtg gatcatcgcc ccaatgcacg
      361 ccgcgcatgc caccatgtag gcgagcccga tgtccatcac caatttcggg ttgcgttccc
      421 ggctccggct gaagccaaag accaggagcg agatcacaaa tcctgcggtg gcaatggtct
      481 ccgtcgcgcc gaactgggac cagcgcggat tgtccggctc ggtcagggcg agtgccaggt
      541 gaccgaaggc cggacccagg atccagagcg ccgcgccgac cagtgcgagc gtctccagcc
      601 tgcgggacgc ctgccgcagc aaatccgccg ggatctgtcg gcgatgaccc gcgccggtct
      661 ggaggtcggg gggagtgtct tgggccggaa gccctatgag cttgatgtct ggcatggaac
      721 ggttcagggc accgaacgaa agctagtgcg acgctttagc ttgcgccgag ctccagccag
      781 ggaagcgccg ctgcgccaga aatcgcgcca gggatcgttc accttttgga accgagcgaa
      841 gacgttgcga atggtgaagc tgttggcccg aagccccttc ttgccgagct caccccaatc
      901 cagcggaacc gataccggag cgccgttcct ggcccggacg gcgtatgccg gggccaccag
      961 ttgggcgtac ccgttgcgat tggtgtcgat gaagacccgg ttgccgcgat tggccttgag
     1021 ctgctccatg gtccgtgcct tcggtgcctg ggacacgatg atctcggcca gctctcggcc
     1081 gaactcccgg accgaatcgt agctttctct ccgctgcagc gggaccacga cgtggagccc
     1141 gcgcgagccg gtggtcttga ggaatgccgg cagctccagc tcgtccagca gctgcttgaa
     1201 ggcaagtgcc gtcgccttca ctacctcgaa atcatcgccc tggggatcga gatcgaagac
     1261 cagctggtcg ggcacattga tcttgtcgat ccggctcagg aaaatgtgcg gggtaacgca
     1321 tgcctggttg gcgatgtata ccagcgtcgc ggtgtcgttg cagactacgt gggtgacgct
     1381 gccgcccacc ttctggaccg tcacagtgcg gatccacttg gggaaatagg acgagacctc
     1441 tttctgaaag aaccgtttgg tcttgatccc gttggggtag cgctcgaggg tgagcggccg
     1501 gtcgcgcaga tagggcagca ttcgagcagc aatccgggcg tagtactcga tcaactcgcc
     1561 tttggtgatg ccgtcatcgg gaaagagcac cttttccgaa cggctgatct cgatctcacg
     1621 gccatcgact ctgattactc cagcgatacc cgccatattc gctcccatct gcacgctgcc
     1681 aggctccagt tttgagtctc tgagccaact cgtaggtcag gcgagctgta aatccggagg
     1741 cacctcggca ttcatcagag agctgcctcc atcggcacta atcagctggc cggtgatcca
     1801 tgccgcctct tctcggcaga gcagcgccac gatgttgccg atatcggccg gcgttcccag
     1861 gcggcgcatg ggggtccatc cccgcttgtg ccagtcaccg attgctcttt gcaccgcgtc
     1921 cgggagtgag ttgaggacgc tgtcttcggt ccagccgggg ctgaccgaat tcaccgtgat
     1981 gcctcgctgg gcgagggcca cggcgaagta ccggaccaac gtttccaggg cggctttggc
     2041 agcacccatt gcgacccatg gttgtaagcc accggtccgt cctcctggag cataggtgat
     2101 ggcgatgatg cggccattat cgaccatcag ccttgccgcc tcccggacgc cgatcaggaa
     2161 tgcggtggcc tgggaattga ttgccgaatt ccattgttcc agcgtgatct ccaaaggcgg
     2221 aacgaagaat tccgaagcct ctggtcgcgc gttgctgacg aagatatcga gccgatcgaa
     2281 ctcatttctc acctgctgga acagccgggt gacctgatca gggcgagtga gatccgcctg
     2341 cagcacggta ccgtccgatc cggtttggcg gatggccgtc agagtctcct tggcggcctt
     2401 gtcgttccgg taatagtgca ccccaattct gactccctgc gcgccgagct taagcgcgat
     2461 accccgcccg attcccctcg atcctcccgt aatgagggca aacttccctt tcagtgacat
     2521 accatcctcc tggaaagacc acctatactg actctcgtct gctccatccg gtctggggat
     2581 ggttgctcct agtagaacct atggagattg gagccgacca gtgagagaca aagtgtccac
     2641 tgaagattcc ttgttgaagg caagaattcc gggtgcgagt gtgggctatt gtatagggat
     2701 gtaccacgaa aaccccttgc cggaggcagc atggacgacc gcctgatcat gatcattctc
     2761 cgtctcatcc acattctcgc cggtatcttc tgggtgggaa ccgcgctagt tgtcgccgca
     2821 ttcctggtgc ccactatgcg ggagacgggt cgcgagggcg gccgggtgat ccaacatctg
     2881 atggtccaac gccggctgca gctcttcatc gtaattacga tggcgctcac gattctgtcg
     2941 gggattacga tgtacgcccg ctgggaagcg gccacccacg gcacctgggc cggaaccgcg
     3001 cccggcatcg gttacggaat cggcggcgcg gcagcgatcc tgggtgcact cgcgggcggg
     3061 ctgatcagcg cggctgcggg acggcgattg ggagaaatcg gccagggtat cggcagtgga
     3121 gttccctcag ccgaacagca ggccgagatg gccaaactcc agacccgtat tgcggtgggc
     3181 accaagcttt cttcggctct cctattggtc gcggcgggag ccatgagcat cgctcggtac
     3241 ttgtgagctg gagtagctag cctggcagac gagcaactgg ccgggcgagc atccggggag
     3301 gctcgaactc actagattcc cgatccatgg gtgaaatccc tccttcgctg gcggcggccc
     3361 tcgccgagcg ctacgtgatc gagcgtgagg tcggggccgg cggtatggcg acggtctatg
     3421 tcgcgcagga cctccgccac aagcgccgag tcgctatcaa ggtgatgcgg cccgagctgg
     3481 gcggacccga cggagtcgag cgattcctgc gggagatcga cctggctgcg ggcctgcagc
     3541 atcccaacat cttgtcggtt ttcgactcgg gcgcggtcga acagaacggc ggcactccgc
     3601 taccctattt cgtgatgccc tacgtcgagg gcgagacgct gcgcgggcgg ctgcagcgcg
     3661 agcgccggct tcctctcgcg accgcggcga ccctggcggc cgaagtggcc gacgcgctgg
     3721 cctatgccca tcggcacggg gtcgtgcatc gggacatcaa gccggaaaac attcttctga
     3781 gcggcggcca cgccatggtc accgactttg gagtggccaa ggcgctggtg agcagcacgg
     3841 cgcccactgg cctgggagat gccaccaggc ttacccgcgc cggcatcgcc atcgga
//
LOCUS       DASRPQ010000217         1664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3470643, whole genome shotgun sequence.
ACCESSION   DASRPQ010000217 DASRPQ010000000
VERSION     DASRPQ010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1664
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3470643"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..903)
                     /locus_tag="VFD73_02565"
     CDS             complement(<1..903)
                     /locus_tag="VFD73_02565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010078638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
                     /protein_id="HZI72901.1"
                     /translation="MTAPSSIDPARFLHDQLASASPDLLRSMLTTFVNTLMSAEADAI
                     CGAPYGMPGPDRVNVRNGYRHRDFDTRTGTLDVAIPKLRSGSYFPDWLLERRRRAEAA
                     LTSVVATCYLLGVSTRRMEKLVESLGITRLSKSQVSVMAADLDAAVEDFRTRPLDAGP
                     YTFVAADALVLKVREGGRVVNVHALLATGVNADGHREILGLQVTSAEDGAGWLGFFRD
                     LTARGLTGVALVTSDAHRGLTEAIGATLPGAAWQRCRTHYAANLMSVTPKASWPWVRT
                     LLHSVYDQPDAASVHAQYDRLIDAI"
BASE COUNT          300 a          551 c          534 g          279 t
ORIGIN      
        1 gatggcgtcg atgagccggt cgtactgggc gtgcacgctg gcggcgtcgg gctggtcgta
       61 gaccgagtgc agcagggtcc gcacccaggg ccaggaggcc ttcggggtga ccgacatgag
      121 gttggcggcg tagtgggtgc ggcaccgctg ccacgcggcg ccgggcaagg tggcgccgat
      181 cgcctcagtc aggccgcggt gcgcatcgga ggtgaccagg gcgacgccgg tcaggccgcg
      241 ggcggtcagg tcgcggaaga agcccagcca gccggcgccg tcttcagcgg aggtgacctg
      301 caggcccagg atctcccggt gcccgtcggc gttgacgccg gtggccagca gggcatgcac
      361 gttcaccacc cggccgccct ctctgacctt cagcaccagc gcgtccgcgg ccacgaaggt
      421 gtacgggcca gcgtccagcg gccgggtccg gaagtcctcc accgcagcgt ccaggtcggc
      481 cgccatcacc gacacctgcg acttggacag ccgggtgatg cccagcgact ccaccagctt
      541 ctccatccgc cgggtcgaga ctcccagcag gtagcaggtc gccaccacgc tggtcagcgc
      601 cgcctccgcg cgtcgccgcc gttccagcag ccagtccggg aaatacgagc ccgaccgcag
      661 cttcgggatc gccacatcca gcgtccccgt ccgggtgtcg aagtcccggt gccggtagcc
      721 gttacggacg ttgacccggt ccgggccggg catcccgtac ggggcaccgc agatcgcgtc
      781 agcctccgcc gacatcagcg tgttcacgaa cgtggtcagc attgaacgca gcaggtccgg
      841 cgacgcggac gccagctggt cgtgcaggaa ccgcgcaggg tcgatactgc tgggagcggt
      901 catcgtgatg tctccttcag aagcactgtg agaggtcttc caaaggatca cgcggtgacc
      961 gccttcacgt cctcacgcca cgcccatcat cgggccggtc ggtacaccac tctgcaggac
     1021 gcaacttcgc tatccaggct gacccggaag ggcaggctga taccggcaat caggccagca
     1081 tgctaatgag gagagaacat gacaagaagg catggcaacg ccaggcatga aatgaccggg
     1141 cagcggggcc tccagagtcg gccagccaac gacactgagc gggcgcagcg tatattccac
     1201 gagctgcacg gcgacgggcg tcacgctctt tgcagtatct gcgatgactg gcgctgttga
     1261 gttgtcaagg ttcaagatct cgcagattca gcgtgccaag cctcccacgc tccacgcgcc
     1321 gtactgtcgc cgctttgcct tctccaggtc ggcggcacta gagtcgcaca tggtgagcgg
     1381 accgctagtt cgccatacga gcgtaacgag acaggccctt accggcttgc gagcaaagga
     1441 cttgccttca cacatttccc tgccgcattc gaccacaatt tctgcattgt gaatgttcca
     1501 gtcgggagcg tcaggctgaa aagattgtta aggctcacag acggggcgca caggtctcct
     1561 atctcgaatt gcttattccc accacttgtg gcccatcccg tatggaacct ctgggagttg
     1621 atagtgggat ctgtgaccgc ttctgcccac tcatgcccgg ctac
//
LOCUS       DASRPQ010000218         1746 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1276791, whole genome shotgun sequence.
ACCESSION   DASRPQ010000218 DASRPQ010000000
VERSION     DASRPQ010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1276791"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..425)
                     /gene="grpE"
                     /locus_tag="VFD73_02570"
     CDS             complement(<1..425)
                     /gene="grpE"
                     /locus_tag="VFD73_02570"
                     /inference="COORDINATES: protein motif:HMM:NF013212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HZI72902.1"
                     /translation="MTRQTDVRNEIEGEDPPIDTPAGMAEPASETGPSAEGGDIASTD
                     MSAVPSSRTEETQPRFRGGRDAKLEGDLAELKDRHLRLAAEFDNYRKRSSRERAELAD
                     RAQASFVAKLLDVLDDLDRLVASDASTPLPALREGLSAV"
     gene            complement(595..>1746)
                     /locus_tag="VFD73_02575"
     CDS             complement(595..>1746)
                     /locus_tag="VFD73_02575"
                     /inference="COORDINATES: protein motif:HMM:TIGR00200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family nicotinamide mononucleotide
                     deamidase-related protein"
                     /protein_id="HZI72903.1"
                     /translation="VRVVRRTSVADRPDEIRNAVSDALGRTGAVLTTGGLGPTRDDIT
                     KKVVAEIFSAPLDFDESVWANLLERFARLERKPAESNRSQAEVPRGAVVLRNRWGTAP
                     GLWLDGAPGLVIMLPGVPLEMRNLLEHEVVPRLRPKADGSVIRSLMVRTTGIPESALA
                     ERLGNVEDEIAPVTLAYLPGLEGVDLRLSVWNVPLDEADLRLQRAAELLRSRAGEHVY
                     AEGDTDLAEVLLERARALGLRLAVAESCTGGLIGARLTEIPGSSDVFVGGVIAYDNRI
                     KVEQLEVPPSLVAEHGAVSEPVVRSMAEGVARRFGVAAAVAVTGIAGPAGGTATKPVG
                     TVWLASVLNGSVLTRRSVFPGARHEVRGRAAQAALHLLLRHLNRSGQTD"
BASE COUNT          311 a          573 c          548 g          314 t
ORIGIN      
        1 tcgaccgcgc tgagaccttc gcggagggcg ggaagcggag tcgacgcatc gctggcgacc
       61 agccggtcca agtcgtcgag cacgtccagc agcttggcca cgaagctggc ttgcgcacga
      121 tcagcgagct cggcgcgctc ccggctgctg cgctttcgat aattatcgaa ctcggcggcg
      181 agccgcaggt gccggtcctt gagctcggcg aggtcgcctt ccagcttggc gtcgcggcca
      241 ccacggaagc ggggctgggt ttcttccgtt cgggaggacg gcacggcact catatcagtg
      301 gaagcgatat cgccaccctc agcgctcggg ccggtttcac tcgcaggttc ggccattcca
      361 gcgggggtat cgattggcgg gtcctcgccc tcgatctcat ttctaacatc ggtttgtctg
      421 gtcacttgcg cacactcact ctgtgagacc ccgggaagat aacacgcggt gaagccagag
      481 tggcagcccg tggtcaggac ccatagggcc cgctagctag atgccgtaac tggttggaat
      541 aacaagaggt gcgtgcctga gcttaagaac tttctagcag ggttggcgac tcgatcagtc
      601 ggtctggccg gatcggttga ggtggcggag cagtagatga agtgcggctt gggctgcgcg
      661 cccccggact tcgtgtcttg cgccgggaaa caccgaccgg cgggtgagga ctgagccgtt
      721 caataccgag gcgagccaca ctgttccaac tggcttcgtc gccgtgccac cggccgggcc
      781 ggctatgccg gtcaccgcaa ccgccgcagc cacaccgaat cgacgagcaa ctccttcggc
      841 catgctgcgg accaccggct cgctcaccgc accatgctcc gccacgaggg acgggggcac
      901 ctcgagctgt tccaccttga ttcgattgtc atacgcgatg acgcctccga cgaagacgtc
      961 ggagcttccc ggaatttcgg tcaagcgggc accgatcaga cctccggtgc acgattccgc
     1021 cactgccagt cggagaccta aggctcgcgc tcgctccagc agcacctccg cgaggtcggt
     1081 atcaccttcg gcgtagacgt gctctcctgc acgagagcga agcagttcgg ctgcccgctg
     1141 cagccgcaga tcggcctcgt cgagagggac gttccacaca ctcagccgca ggtccacgcc
     1201 ctcgagaccg gggagatagg caagggtgac cggcgcgatt tcgtcctcga catttcccag
     1261 ccgctcggcc aatgccgatt cgggtatacc ggtggtccgg accatcagtg accggatgac
     1321 cgacccgtcg gccttgggcc gcagtcgggg aacgacttcg tgctccagca ggttgcgcat
     1381 ttccaaggga actcccggca gcatgatgac gagtccagga gctccatcca gccagagacc
     1441 tggtgccgtt ccccaccggt tccgcagtac gaccgccccc cgaggaacct cggcctggct
     1501 ccggttgctc tcggccggtt tgcgctccag ccgggcaaat cgctccaaaa ggttggccca
     1561 gacactttca tcgaaatcga gcggagcact gaagatctcg gcgacaactt tcttggtgat
     1621 gtcatcgcgg gtaggaccga gaccaccggt cgtcagcacg gcgccggtgc gccccagtgc
     1681 atcgctgact gcattgcgga tctcgtccgg tcgatcagcg accgatgtgc gacggacgac
     1741 cctcac
//
LOCUS       DASRPQ010000219         1012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4097154, whole genome shotgun sequence.
ACCESSION   DASRPQ010000219 DASRPQ010000000
VERSION     DASRPQ010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4097154"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..436
                     /locus_tag="VFD73_02580"
     CDS             <1..436
                     /locus_tag="VFD73_02580"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI72904.1"
                     /translation="AGVAHVPYDPVLLLTLVGELLLLSFTLTAFGVMMAARIKQIQAF
                     MALTQLFVLPLFFLSGALYPLNGLPAWLTVLTRVDPITYVVDPMRQAVFAHLPFGQVL
                     NRLSPGITWFGWQVPLGLSLGIVAAMGLAMLGIAIAEFRKTE"
BASE COUNT          187 a          384 c          252 g          189 t
ORIGIN      
        1 ggccggcgtg gcgcacgtgc cctacgatcc ggtgctgctg ctcaccctgg tgggggagtt
       61 gctgctgctg tcgttcacgc tgaccgcgtt cggcgtcatg atggcggcca ggatcaagca
      121 gatccaggcg ttcatggcgc taacccagct gttcgtgctc ccgctgttct tcctctccgg
      181 cgcgctgtac ccgctgaacg ggctgccggc ctggctgacc gtgctgacaa gggtcgatcc
      241 gatcacctac gtggtcgacc cgatgcggca ggcggtgttc gcccacctgc ccttcggcca
      301 ggtactgaac cggctgagtc ccggcatcac ctggttcggc tggcaggtcc cgctaggcct
      361 gtcgctgggc atagtcgccg cgatgggcct ggcgatgctc ggcatagcca tagccgagtt
      421 ccgtaagacg gaataacgat cgcacattgc atacgatgcg atggcattcg gcatccatta
      481 ttagtaagca cctgctgatc gttttccagg tttttgctcg tctctataac gaaaagtgac
      541 gaacaatcct cgccacgcta cgcaaccatt cggctctctg tagcacaaga aaccttacgg
      601 attgcgctcg cgcgccataa ctccaactct cgcacccccg gggaacctaa ttcgcagtta
      661 tggcgcaaac ccacttcacc cctaatcctc ctcgcgcccg caacccctcc cgcagatgat
      721 ccccagagca tccccagaac cccgctgaac ccccggagcc ccggctctcc acgtccccgg
      781 gccctcggcg ccccgcaccc agtccgcgac ctcagcgccc cgtccacccc cgtgacaccg
      841 agtcaccaag atccttccgc ccatccccgt caatcttgaa cccgccccta attgatcttc
      901 accccccgtg ttctccctgg taccccccgc ccccaccaac gaaccagccc aagcgaagcg
      961 agtgtcaacc ccccttgcca agcgcaacca gaaaccagaa ccaaggaccc ca
//
LOCUS       DASRPQ010000220         1517 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_339135, whole genome shotgun sequence.
ACCESSION   DASRPQ010000220 DASRPQ010000000
VERSION     DASRPQ010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_339135"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..1143)
                     /locus_tag="VFD73_02585"
     CDS             complement(139..1143)
                     /locus_tag="VFD73_02585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72905.1"
                     /translation="MSAEAGGIRSNLIQELFWTRTGLLLLILVVTSAASLAISSQMDS
                     GTARNLLTALGTGTLISAVVSFTQTLITSKAAQKALLAPVIEESRKALKELTEEYRAL
                     DREFFPSHVFEPTATPDPEFNKLMMQDLERTRLYCFRGFAGRYAAGRVLLSQTECELK
                     AVLADPRDDSAISGRARYLLRNEGADGDYDEIQDRLKEQISIGLVGLYQARSRCSRID
                     VTIVSDPPLDRLELFDDSVWMTLYSNTAGVLRPYPRTLRFTESSFLYAMERAEFLRIS
                     NSKAGYHFVITPSTSRNDFLALYEKITGETLEQDGFKELEEKFHAFRREFSASAQLRS
                     "
BASE COUNT          252 a          487 c          487 g          291 t
ORIGIN      
        1 ctccggccgg gccgcccact cgcggaacca ctcgccgacg tcggtccagt ggtccacgac
       61 gggaaattcg gcgcacttca cccgagcggc gagctcctcg agcgcggaca acccggtgaa
      121 ctcggctagc aagatcgatc agctcctcaa ctgagcggaa gcggagaatt cgcgacggaa
      181 agcgtggaac ttctcttcca gctctttgaa cccgtcttgt tcgagagttt cgccggtgat
      241 cttctcgtac agcgccagga agtcgtttcg cgacgtgctc ggcgtgatga cgaagtggta
      301 cccggccttg gaattgctga tccgcaggaa ctcggcgcgc tccatcgcgt acaggaacga
      361 gctctcggtg aacctgagcg tcctgggata gggcctcagc actccggcgg tgttgctgta
      421 gagcgtcatc cagacgctgt cgtcgaacag ctcgagcctg tcgagcggcg gatcggaaac
      481 gatggtgaca tcgatcctgc tgcacctgct tctcgcctgg tacagcccga ccagcccgat
      541 gctgatctgt tccttcagcc tgtcctggat ctcgtcgtag tcaccgtcgg cgccttcgtt
      601 gcgcaacagg taccgcgccc gcccgctgat cgcgctgtcg tcacgcggat ccgccagcac
      661 ggccttgagc tcgcactccg tctggctgag cagcactctt cccgccgcgt accgcccggc
      721 gaacccgcgg aagcagtaca gccgcgtccg ctccaggtcc tgcatcatga gcttgttgaa
      781 ctcggggtcg ggcgtggccg tcggctcgaa cacgtgactc gggaagaact cccggtccag
      841 cgcccggtac tcctcggtga gttctttgag cgccttcctg ctctcctcga tgacaggagc
      901 gagcagcgcc ttctgcgcgg ctttcgacgt gatcaacgtc tgcgtgaagc tcacgaccgc
      961 cgatatgagc gtgccggtgc ccagcgctgt cagcaggttt ctagctgtac cggaatccat
     1021 ttgactggaa atggccaagc tggccgcgga cgtcaccacg agtatgagga ggagcaaccc
     1081 ggtccgagtc cagaacaact cctggatcag gttgctgcgg atgcctccgg cctccgcgga
     1141 cacgggtccc acctcctggg ttcacctcaa cggctgctac ccgaacggac gaatgcaggc
     1201 cgtgtccgat caagtgcgcg gagttactgt acgcgtcggt caaaagataa ggaagctgct
     1261 attcgtgcga catttagaac cggaataacc gcccttgagc ccagtcgccg gcccgcatcc
     1321 gtgcgcatcg gtgacgccct gtcgctggtg gccccgaacg tgtcggatga gggtgaccca
     1381 ggcgcccgaa cgcacccacg tggtgtggga tgggccgctc ggggctgggg ggcgttgggc
     1441 cggtgggcgg agcgttctgg ggcggtctgg gcgtgtcggg ggtgccgggt ctgcttgcga
     1501 tggcttgccc cggtggc
//
LOCUS       DASRPQ010000221         1821 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2216171, whole genome shotgun sequence.
ACCESSION   DASRPQ010000221 DASRPQ010000000
VERSION     DASRPQ010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2216171"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..962
                     /locus_tag="VFD73_02590"
     CDS             <1..962
                     /locus_tag="VFD73_02590"
                     /inference="COORDINATES: protein motif:HMM:NF015573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015501 - glutamate:sodium symporter
                     activity [Evidence IEA];
                     GO_process: GO:0015813 - L-glutamate transmembrane
                     transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HZI72906.1"
                     /translation="SMGLLRAGGLQVLIFLLFSTAFCLVQNFVGMAIADGFHQHPLLG
                     VVAGSVTLVGGPATGMAFAPIFEQAGLRGAGPLALTSATVGIVFGGLVGGPVGTWLIR
                     RFGLAPQAGTRSELDAELDTAPETLVVEVDREDSSLIRNLVILALAMGLGSIVSNYIQ
                     SLGVTLPAYIGAMIVASAIRNLDDATGWFGIDIRAMEFVGNLALNIFLVVALMNLRLW
                     ELAHLALPLSVILAVQVVVVLVFAATASFRLMGRDYDSAVMASGFVGFVLGTTANAVA
                     NMRALVVRFGPAPRAFLVVPLVGAFFIDFTNAIIITLFVNWLK"
     gene            1337..>1821
                     /locus_tag="VFD73_02595"
     CDS             1337..>1821
                     /locus_tag="VFD73_02595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72907.1"
                     /translation="MYRTSSKLASRPRPKVQLLGNQGPLPQFFLVGLKWCAAWAVIGC
                     ILGLLLMLGKAEPLAESGAKPSSIFAYIFWVPALAGGAAAAGLAIGLIFGGLMAVTTD
                     WRDSLADTPGMLAQAGPHVMCGAGAGLVAGLLAGGMGGALFFGALGACTAAGFYWMSV
                     R"
BASE COUNT          298 a          529 c          598 g          396 t
ORIGIN      
        1 cgagcatggg gctgctcagg gccggcgggc tccaggtgct catcttcctg ctcttctcga
       61 cggcgttctg tctggtccag aatttcgtcg gcatggcgat cgcggacggg ttccaccagc
      121 acccgttact gggagtcgta gcgggatcgg taacgctggt gggcgggccc gccaccggaa
      181 tggcattcgc tccgatcttc gaacaagccg gcctcagagg agcgggcccg ctggcgctca
      241 cctcggccac agtcggcatc gtcttcggcg gactggtggg cggcccggta ggaacctggc
      301 taatccgccg ctttggtttg gcgccacagg caggcacgag atccgagctc gacgcggaac
      361 tggacactgc tcccgagact ctggtggtcg aagtcgaccg ggaggattcg tcgctgatcc
      421 gcaatctggt gatcctggct cttgccatgg ggctcggcag tatcgtgagc aactatatcc
      481 aatcactggg cgttactctg cccgcctaca tcggcgcaat gatcgtcgcg tcggcaatca
      541 gaaacctgga cgatgccacc ggctggttcg gaatcgatat ccgcgccatg gagttcgtag
      601 gaaatctggc gctgaacatt tttcttgttg tggcactcat gaatctgagg ctctgggagt
      661 tggcccacct tgccctgccg ctctcggtaa tcctcgcagt ccaggttgtg gtcgtgctcg
      721 tcttcgccgc aacggcatcg ttccgtctca tgggaaggga ctacgactcc gcggtcatgg
      781 ccagtgggtt tgtgggattc gtgctgggca cgactgcgaa tgcggtggcc aatatgcgcg
      841 cgctggtggt gcggttcggc ccggcaccca gggcctttct ggtggtgcca ctggtgggag
      901 cattctttat cgacttcact aacgccatca tcatcacgct gttcgtcaac tggctgaagt
      961 gacgaagctc gaaaacctcc gtggtgaacg atctcgaatg gccccctcgc cgagattgac
     1021 cgtgagtcat caaggaggga cgcgggcgca ggtgccacgc cggtcagtgc agaattcggg
     1081 cggcggaggg ctgattcatg ccgtactctg cattacgccg atcatcgatg gcagaggtgc
     1141 cgtgctgcca gcgcaggagc tgagccaaca tctcgacggt aagtggttat cacgatgcgc
     1201 aatgcgtctc ccgtccggct tggcggatac ggcattcggc ttcgctcccg acgttcagcg
     1261 ggcggcttgc cccttgctta cagaacctgg gattcatccg agacaactgg cgtaatcctc
     1321 cggaagagga ggctgaatgt accggacgtc atccaaactc gcgtcgcggc cgagaccgaa
     1381 ggtccaactg ctgggaaacc aaggcccgtt gccccagttc tttctggtgg gtctcaaatg
     1441 gtgcgccgcc tgggcggtga ttggctgtat cctgggcttg ctgttgatgc tgggcaaagc
     1501 ggaaccgctc gcggaatctg gcgcgaaacc cagcagtatc ttcgcctata tcttctgggt
     1561 cccggctctc gccgggggag cagccgccgc cggtctggca atcgggctga tattcggcgg
     1621 tctgatggcg gtcactacgg actggcgcga ctcattggcg gataccccgg gcatgctggc
     1681 ccaggcagga cctcacgtaa tgtgtggcgc tggtgcaggg ctggttgctg gattgctcgc
     1741 gggtggtatg ggtggcgctc tctttttcgg ggcactcgga gcctgcactg ccgcgggctt
     1801 ttactggatg agtgtgcggt g
//
LOCUS       DASRPQ010000222         2144 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_650334, whole genome shotgun sequence.
ACCESSION   DASRPQ010000222 DASRPQ010000000
VERSION     DASRPQ010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2144
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_650334"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..385)
                     /locus_tag="VFD73_02600"
     CDS             complement(<1..385)
                     /locus_tag="VFD73_02600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72908.1"
                     /translation="MRYRLIPAALAAGASLALLASPATATPAWTAVPLTPRITANRKC
                     IMNPFTDSDNGAARAARLLADAERIANSITDETPKAWALSAVASTLAATEPDRAEHIA
                     NSITDETAKASALGVVAAAVAATDSD"
     gene            complement(840..1238)
                     /locus_tag="VFD73_02605"
     CDS             complement(840..1238)
                     /locus_tag="VFD73_02605"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HZI72909.1"
                     /translation="MIDCSAMIELLAAKTHTGDAIARRVTSALTLYAPYVLDGEVISA
                     LLGLRRGQKISEQEADAALSSYCAFPIKRQDVLPLWPRLKSLHANLSAYDAQYVALAE
                     ALNVPLITADVRIKRSNAARCEVEVFDTNS"
     gene            complement(1241..1471)
                     /locus_tag="VFD73_02610"
     CDS             complement(1241..1471)
                     /locus_tag="VFD73_02610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72910.1"
                     /translation="MTALTIRDVSEDAVRTMKIRAAQAGQSLQAYLRGLIEREAASPT
                     VAEAVEQARRQATANISTADILAAIDEGRAGR"
     gene            complement(1556..>2144)
                     /locus_tag="VFD73_02615"
     CDS             complement(1556..>2144)
                     /locus_tag="VFD73_02615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72911.1"
                     /translation="GSGPSAEPGKRLLKWGYNLQVPQDALSSVLVDAQERQQSSSVPF
                     GKVHPQVRAALESRLADLLPSPLFELVRQSSKSAIQAIYSVVPCSYARDRLCLVGDAG
                     AVFTPFTSSGVLKAVANATSLADALVGAPAVDDVLRRWSKAQLQVAAQVVPFAEFAER
                     SQVFEMPDLAAMPTTATNDWLASSYSGFVLTLPGV"
BASE COUNT          359 a          657 c          742 g          386 t
ORIGIN      
        1 ggtcggagtc ggtggccgcc actgccgccg cgacgacacc cagcgctgat gccttcgccg
       61 tctcgtcggt gatggagttg gcgatgtgtt cggcgcggtc gggctcggtg gccgccagcg
      121 tcgacgcgac ggcgctcagt gcccatgcct tgggggtctc gtcggtgatg gagttggcga
      181 tgcgctcggc atcagccagg agccgggcag cacgggctgc accgttatcg ctgtcggtga
      241 acgggttcat gatgcacttt ctattagcag ttatgcgggg agtcaggggc accgccgtcc
      301 aggccggcgt cgccgtggcc gggctggcga gcagggcgag tgaggctccg gcggccagcg
      361 ccgcggggat gagccgatat cgcatgctgg ttccttcgcg gaacgtgaac tgcctgaacc
      421 agcacccgac catagagaac acggctgtaa cggtgctgac gcggcgttga aacgggaggg
      481 ctctccccgg attgacatca cgctatggcg agcggcttaa cgaactcgtg gctcaagccg
      541 ctggcggaac ccgtagctct cctcgagcgg ccttgtgcca acgggcgcag gcacgcgctg
      601 atcagccggg cggaggtaac gttctgtagt cggcatccgg tgatcgctcc ggtgaggcgt
      661 ggaccggttc gtggaccgag ccacccgtgc aatcggtgca atcagcgcta tcggtggcgc
      721 gacttcgtgg tatccgtgca ggtagggtac ctggagcgcc gggctgtgct tctcataatc
      781 cgctggtcgt gggttcgagc ccccaccagc cacgcacagc cgcccgccaa ctccgccggt
      841 caactgtttg tgtcgaagac ctcaacctcg catcgtgctg cattgctgcg tttgatccgt
      901 acgtcggcgg tgatcagggg gacgttgagg gcttcggcca aggcgacgta ctgagcgtcg
      961 taggcggaca ggttggcatg aaggctcttg aggcgaggcc acaagggcag cacgtcctgc
     1021 cgtttaatgg ggaacgcaca gtagctggag agcgcggcgt cggcttcttg ttccgagatt
     1081 ttctgtccgc gcctgagccc gagaagcgcc gagatgacct ctccgtcgag cacgtatggc
     1141 gcatacaggg tcagcgctga ggtcacccgg cgagcgatgg catctcccgt atgcgtcttc
     1201 gcggccagca gttcgatcat ggccgagcag tcgatcacgg tcaacgtccg gctcgtccct
     1261 cgtcgattgc ggcgaggatg tcggcggtgc tgatgttggc ggtcgcctgc ctgcgggctt
     1321 gctccacggc ctccgccacg gtggggctgg ccgcctcgcg ctcaatcagg cctcggaggt
     1381 aagcctgcaa agactggccg gcctgagccg cgcgaatctt catcgtgcgc acggcgtcct
     1441 cggacacgtc ccggatggtg agtgcggtca tgaatgcata ttacagtcac tgactgcata
     1501 atgcattcaa ttgcggtcca ggcacatcgt ctcatgcgtg ccgacgggca gaccgtcaca
     1561 cgccggggag cgtgaggacg aacccggaat aagaggaggc cagccagtcg ttggtcgccg
     1621 tggtgggcat ggcggcgagg tctggcatct cgaacacctg gctccgctcg gcgaattcag
     1681 cgaacggcac tacctgggca gcgacctgga gctgggcctt actccaccgg cggagaacat
     1741 catcaacggc cggggcgccg acgagagcgt ctgccagtga ggtggcattg gccactgcct
     1801 tgagcacgcc gctggaggtg aacggggtga acaccgcacc ggcgtcgccg actaggcaca
     1861 ggcgatcgcg ggcgtagctg cagggcacta cggagtaaat tgcctggatc gctgatttgc
     1921 tgctctggcg caccagctcg aacagcggcg agggcaacaa gtccgccagg cgggactcca
     1981 aggccgccct gacctgcgga tgcaccttcc cgaacggcac cgagcttgac tgctgccgct
     2041 cttgagcatc gaccagcacc gaggacagcg cgtcctgcgg gacctggagg ttgtaacccc
     2101 acttgagaag gcgtttgccc ggttcagcgc tcggcccgga tccg
//
LOCUS       DASRPQ010000223         1254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1276988, whole genome shotgun sequence.
ACCESSION   DASRPQ010000223 DASRPQ010000000
VERSION     DASRPQ010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1276988"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1242)
                     /locus_tag="VFD73_02620"
     CDS             complement(<1..1242)
                     /locus_tag="VFD73_02620"
                     /inference="COORDINATES: protein motif:HMM:NF012873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="condensation domain-containing protein"
                     /protein_id="HZI72912.1"
                     /translation="MEGAKQGRLPEIERVERGERIPLSFAQERLWFLAQMEGVSAAYH
                     IPLGVRLRGELNREALVRALGRIVERHEALRTTFVMVDGEAEQRIAPVEESRFELREH
                     DLRECEDAQEELKRIVIEEAGTRFDLEAGPLVRGRLIQVSEEEHVLLITMHHIVSDGW
                     SLGVLFEELGVLYGAYVKGEEDPLPELAVQYADYAVWQRRWMEGEVLERQAEYWKENL
                     SGVPEVLEVPRDHVRPAQQDYAGALVEVELSEQLTAGLKELSSRQGTTLYMTLLAGWA
                     VLLGRLSGQQDVVIGTPVANRGRMEIERLIGFFVNTLVLRVDVSGRPTVGEVLERVKR
                     QAIGGQQHQEIPFEQVVELVQPVRSLAHSPVFQVMFTWQDVVEGKLELAGLEMGGLES
                     GGGAVVSKFDLTLSLQETGGRI"
BASE COUNT          239 a          552 c          216 g          247 t
ORIGIN      
        1 aatccttcct cccgtctcct gcaatgacag cgtcaggtca aacttcgaca ccaccgcccc
       61 gccgcccgac tccagccctc ccatctccaa tcccgccagc tccagctttc cctccaccac
      121 gtcctgccac gtaaacatca cctgaaacac cggactgtgc gccagactcc gcaccggctg
      181 taccagctcc accacctgct cgaacggtat ctcctgatgc tgctggcctc caatcgcctg
      241 tctcttcacc cgctccagca cctcgcccac cgtcggccgc cccgatacat ccacccgcag
      301 caccagcgtg tttacaaaaa atccaatcag cctttctatc tccatccgtc cccgattggc
      361 caccggcgtc ccaatcacca catcctgctg tcccgacaat ctccccagca ataccgccca
      421 ccccgccagc agcgtcatat acaacgtcgt tccctgacgg ctgctcagct ccttcaaccc
      481 ggccgtcagc tgctcgctca gctctacttc caccagcgct cccgcataat cctgctgcgc
      541 cggacgcaca tggtcccgcg gcacctccag cacctccggc actccagaaa gattttcctt
      601 ccagtactcc gcctgccgct ccagcacctc cccttccatc catctcctct gccacaccgc
      661 atagtcggca tactgcaccg ccagctccgg caacggatct tcttctcctt tcacatacgc
      721 tccgtacaac acgcccaact cttcaaacaa cacccccagc gaccatccgt ccgacacgat
      781 gtggtgcatc gtgatcagca gcacatgctc ttcttcgctc acctgaatca accgcccgcg
      841 caccagcggc cctgcttcca gatcaaaccg cgtccctgct tcctcaatca ctatccgctt
      901 caactcttcc tgcgcatctt cacattcccg taaatcgtgt tcccgcaact cgaaccggct
      961 ctcctcgact ggcgcgattc tctgttccgc ctccccatcc accatcacga acgttgtccg
     1021 cagcgcttca tgccgctcca cgatccgccc cagcgcccgc accagcgcct cccgattcaa
     1081 ctctccacgc aaccgcactc ccagcggaat gtgatacgcc gcgctcactc cctccatctg
     1141 cgccaggaac cacaaacgct cctgcgcaaa cgacaatgga attctctctc cccgctccac
     1201 ccgctcgatc tccggcagcc ggccctgttt cgctccctcc atcccccgca caaa
//
LOCUS       DASRPQ010000224         2743 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2543476, whole genome shotgun sequence.
ACCESSION   DASRPQ010000224 DASRPQ010000000
VERSION     DASRPQ010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2743
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2543476"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..132)
                     /locus_tag="VFD73_02625"
     CDS             complement(<1..132)
                     /locus_tag="VFD73_02625"
                     /inference="COORDINATES: protein motif:HMM:NF019814.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72913.1"
                     /translation="MPPIWSSDLMKATDIRRGHVIFFEGQHCRVMEFTHRTPGNLRAF
                     "
     gene            249..545
                     /locus_tag="VFD73_02630"
     CDS             249..545
                     /locus_tag="VFD73_02630"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HZI72914.1"
                     /translation="MTWGEGRSGAERRKPGGSHTGPRPQLQRRSDDKIYEEVWELLTN
                     NADLDASEIELHVEGGEVTLTGTVDSRDAKWLTEDLVNSVTGVREVNNRLKVSR"
     gene            549..1517
                     /locus_tag="VFD73_02635"
     CDS             549..1517
                     /locus_tag="VFD73_02635"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HZI72915.1"
                     /translation="MAAPPDFDLLHHEDEGRLRLERWRKNVGAPVALDLAPATSSSGD
                     VASLLVLSWNVWIGRGKLSEVVSRIRAGAFRHHGAEPDIPLIVLLQEAFRTDGSIPEK
                     SSGRSGRVLVAGLGIQEDIVETAQALGLSLRYAPSMRNGVDRSDRGNAILSSLALQYA
                     QAIELPLVLQRRVAVSAQVTVANTRFRLVSAHLDPRGPPGHRWLGAAGRERQARHLME
                     TIIDDSVILGADLNLGRGRYERAWRLLSDAGFTFGVPPSAPKWRHTFHALPRLILDYL
                     LIRDRQSAIRQARIHRLDEHPRDRGPRVFGSDHHPLLARIDFHSFS"
     gene            1529..>2743
                     /locus_tag="VFD73_02640"
     CDS             1529..>2743
                     /locus_tag="VFD73_02640"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HZI72916.1"
                     /translation="MGEWLGFGADLPWWGWALMIIGVIALVGVIGALFLPDWPNPDFS
                     IGFDADPGSDEFSGGVATFLNEPLFQGGKATLLQNGDAFYPAMLQAIREARDTINFET
                     YIFEPDEIGQQFIDAFKERAMAGVEVRLLVDGFGGMKLKRRYRDDLKRAGVKVHRFRP
                     LGLRNLVRIYRRAHRRAIVMDGKVGFTGGAAVSKKWKGNVTNNHEWRDSMTQVTGPLV
                     AGIQSAFAENWVYCTGEVLAGPRFFPPLERGPGVCGISVVSSPSDSLQPIRLLFWLSF
                     SNARKRLWICNSYFIPDRRLRDAVVDRARHGVDVRILVPGNHTDAVPVQAAGQSYYEE
                     LLAAGVRIFEFEPAMMHAKTAVVDSAWSIVGSANMDERSMELNEENVLGIADREFARS
                     IEEGLSADYTRSR"
BASE COUNT          501 a          816 c          892 g          534 t
ORIGIN      
        1 gaaggctcgc aggttccctg gcgtccgatg ggtgaattcc atgacccggc agtgttggcc
       61 ttcgaagaag atgacatgtc cccggcggat atcggtggcc ttcatgagat cggagctcca
      121 gataggtggc attcggatcg gggggactct tgcctcgtcc cggaaagttt gaaaatatac
      181 gagcgtccag tccccgcccc gcggggatag gttaggttct gctcttccag aatgcgaggg
      241 tgcgggtcat gacttggggt gaaggccgga gcggagcgga gcggcgaaaa cccggcggct
      301 cgcacaccgg cccgcgaccg cagcttcaac gccggtcgga tgacaagatc tacgaagagg
      361 tttgggagct gctgaccaac aatgcggacc tggacgccag cgagatcgag ctccacgtcg
      421 aaggtggcga ggtcaccttg accggcacgg tagacagccg ggatgccaag tggctcacgg
      481 aagacctggt aaactcggtc accggggttc gtgaggtgaa taaccgtctc aaggtgtccc
      541 ggtaactgtt ggccgcgccg cccgatttcg atctcctcca ccatgaggac gaggggcggc
      601 tccggctgga gcgttggcgt aagaacgtcg gagcgccggt ggcgctggac ttggctcccg
      661 ccacgagcag ttccggcgac gtggcaagtc tcctggtcct cagctggaac gtctggatcg
      721 gaaggggaaa actcagcgag gttgtcagcc gcatccgggc cggcgcgttc aggcatcatg
      781 gcgccgagcc ggatatccct ctgatcgtgc tgctgcagga ggctttccgc accgacggct
      841 cgatcccgga aaaatcgtcg ggccgctccg ggcgggttct ggttgcgggg ctcggcattc
      901 aggaagacat cgtcgagaca gcccaggcgc tcggtctgag ccttcgctat gcaccctcga
      961 tgcgcaacgg ggtcgaccgt agcgaccgag gaaacgcaat cctctcctcc ctcgcgctgc
     1021 agtatgccca ggcaatagag ctccccctgg tactgcagcg ccgagttgcc gtctcggccc
     1081 aagtcaccgt tgccaacacc aggttccgtc tggtgagtgc ccacctggac cctcgcggtc
     1141 ccccgggcca ccggtggctt ggcgcggcag ggcgggagcg ccaggcccgc catctgatgg
     1201 agaccatcat cgatgatagc gtcatccttg gagccgatct gaacctcggg cgagggcggt
     1261 atgagcgagc ctggcgctta ctgtccgatg cgggcttcac ctttggcgtg cccccttctg
     1321 cacccaagtg gcgccacacc ttccatgctc ttccacgact aatcctggat tacctgctca
     1381 ttcgcgatcg tcagagtgcg atacgccagg ctcgaattca ccggttggac gagcatcccc
     1441 gagaccgggg acctcgcgtg tttggctctg atcatcatcc gctgctcgcg cggatcgact
     1501 tccactcgtt cagctgaggg caggtccaat gggcgaatgg ctcggcttcg gcgccgatct
     1561 accctggtgg ggttgggccc tgatgatcat tggagtgatc gccctggtcg gggtgatcgg
     1621 cgctttgttt ctgcccgatt ggcccaaccc cgacttcagt attggattcg atgccgaccc
     1681 cggctcagac gagttcagcg gaggagtcgc gactttcctg aatgaaccgc tgtttcaggg
     1741 aggcaaggcc acgctcctgc aaaacggcga tgcattctat ccggccatgc ttcaggcgat
     1801 ccgggaagct cgcgacacca tcaatttcga gacctacatc ttcgagcccg atgagatcgg
     1861 gcaacagttc atcgatgcct tcaaggaacg agcgatggcg ggagtggagg tccggctcct
     1921 cgtcgacggg ttcggaggaa tgaagctgaa gcgtcgttac cgggacgatc tgaagcgggc
     1981 aggagtcaag gtgcatcgct tccgccccct gggcctgcgc aacttggttc ggatttaccg
     2041 gcgagcgcat cgacgtgcca tcgtcatgga cgggaaggtc ggatttaccg gtggcgcggc
     2101 ggtcagtaag aaatggaagg gcaatgtcac taacaaccac gagtggcgtg acagcatgac
     2161 ccaggtcact ggacccttgg ttgccgggat ccagtccgcc ttcgcggaga attgggtgta
     2221 ctgcaccggg gaggtgctgg ccggacctcg attctttcct cctttggagc gcggcccggg
     2281 ggtctgcggc atctctgttg tcagctcgcc atccgactcg cttcaaccga tccggcttct
     2341 gttctggctc agcttcagta atgcgcgcaa gcgcctctgg atctgcaact cttatttcat
     2401 acccgaccgc cgtctgcgag acgcggtcgt ggaccgggcc cggcacggcg tggacgtacg
     2461 aatcctggtc ccgggaaatc acaccgacgc agttcccgtc caggcagcgg gacagagcta
     2521 ttacgaagag cttctcgcgg caggggttcg aattttcgaa tttgagccgg cgatgatgca
     2581 cgccaagacg gcggtggttg acagtgcctg gtcgattgtc gggtcggcca acatggatga
     2641 acggagcatg gagctcaatg aggagaacgt gctgggaatt gccgaccgcg agttcgcgcg
     2701 gtctatcgag gaagggctca gcgccgacta cacgcgctcg cgg
//
LOCUS       DASRPQ010000225         1309 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_651396, whole genome shotgun sequence.
ACCESSION   DASRPQ010000225 DASRPQ010000000
VERSION     DASRPQ010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_651396"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..349)
                     /locus_tag="VFD73_02645"
     CDS             complement(<1..349)
                     /locus_tag="VFD73_02645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72917.1"
                     /translation="MVMLPLRDVRLPKATQQFYDGWLADLEEQLSAPGADWHKLARDL
                     LFQINYPGDRDYDGLLQDPKTPETTRVALLSLDPRNVTLEPEYYADVDSERYARVKPL
                     IWLWQGFDRSPIGG"
     gene            503..>1309
                     /locus_tag="VFD73_02650"
     CDS             503..>1309
                     /locus_tag="VFD73_02650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72918.1"
                     /translation="MRTLRPAALLLAGLSLPTLLLAQDQSESTTIGGYGEVHYTNASG
                     PNSPGQIDVRRFVVYVAHSFSERLAIRSELELEDAKVEGGESGGEIALEQLYLDYTLS
                     PAITLRAGLVLPPVGILNETHEPPTFNGVERPLFDQDVLPSTWRELGAGVVGTLPGSS
                     GLSYRVYLVNGLRAEGFDAVSGIRGGRQEGKEASFANPSVTGRLEWARPGLRLGGSFW
                     YGGSANQDPALGTGSFDNAVALLSADARYDTGPLMFRAVAARISIADADLI"
BASE COUNT          246 a          406 c          416 g          241 t
ORIGIN      
        1 cgcccccaat cggcgaccga tcaaacccct gccaaagcca gatgagcggt ttgacacggg
       61 catagcgctc ggagtctacg tcggcatagt actcaggctc gagcgtcacg ttcctgggat
      121 cgagcgacag cagcgcgacc cgtgtggtct ccggggtctt cgggtcctgc agcagtccgt
      181 cgtaatcccg gtcccctgga tagttgatct ggaagagcag gtcgcgagca agcttgtgcc
      241 aatccgcgcc cggcgccgag agctgttcct ccaggtctgc cagccagccg tcgtagaact
      301 gttgcgtggc cttgggaaga cggacatctc gcagtggcag catgaccatt ggggcctcgg
      361 gggtgcccag ggaaagtgat ggaagtctgg ctgccgtcca atgatgcgca gtttcgagtg
      421 ttgacaccag tgctaaaagg gaataaagta gtaggggttc tacatgaaaa tgattctcat
      481 ctagtcttcg accaggaccg ccatgcgaac gcttcgtccc gccgctctcc tcctggccgg
      541 tctctccctc cccaccctcc tcctcgccca agaccaaagc gagtccacta ccatcggggg
      601 atacggagag gtgcactaca ccaatgccag cggcccgaac agccccggac agatcgacgt
      661 ccgccggttc gtcgtttacg tggcccacag cttcagcgag cggctggcca ttcgatccga
      721 gctggagctg gaagacgcga aagtcgaggg tggcgagtca ggcggcgaaa tcgcgctgga
      781 gcaactatac ctggactaca cgctctcgcc ggctattacc cttcgcgccg ggctggtcct
      841 gccgccggta gggattctca acgagactca cgagcctcca acattcaacg gcgtcgagcg
      901 tccgctgttc gatcaggacg tgcttccgag cacctggcgc gagctgggag ccggcgtggt
      961 gggaaccttg cccggctcca gcggtctgag ctatcgagta tacctcgtga acggactcag
     1021 agctgagggc tttgacgcgg tctcagggat tcggggcggc cggcaggagg ggaaagaggc
     1081 cagcttcgcc aatccttcgg tgaccgggag gctcgagtgg gcccgaccag ggctccggct
     1141 gggcggctcg ttctggtatg gcggaagtgc caaccaggat cctgccctgg gcaccggcag
     1201 cttcgataac gcggtggcgc tgctgtcggc cgacgcacgc tatgataccg gccccctgat
     1261 gtttcgcgca gtggccgcca gaataagcat cgcggatgcc gatctaatc
//
LOCUS       DASRPQ010000226         1001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4098456, whole genome shotgun sequence.
ACCESSION   DASRPQ010000226 DASRPQ010000000
VERSION     DASRPQ010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4098456"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            248..>1001
                     /locus_tag="VFD73_02655"
     CDS             248..>1001
                     /locus_tag="VFD73_02655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72919.1"
                     /translation="MPAFICTTCGTQHSPSEAPPAACLICTDERQFVPASGQSWTTLE
                     GLRKAHSNKFRRLATGLTTIETTPAFGIGQRAILVRTPAGNVLWDCIALIDEATVDVL
                     KGLGGITAIAISHPHYYTTMVEWSRALGGVPIYLHAADREWVMRADPAVEFWQGDTKP
                     IGQGLTLVRLGGHFDGGTVLHWADWGEGRGVLLSGDILQVVPSGHVSFMWSYPNLIPL
                     SAAEVRRMADILQPFAFDAVYGAFSGRGQIDAN"
BASE COUNT          186 a          312 c          324 g          179 t
ORIGIN      
        1 atgcgccgaa cacagacgca agatcagccc ggctcgcatg caggagctgc tccaacggtg
       61 ccagaaggac gctgaacgcg tagatcgagc caagcggcag gctcaagatg ctagcagcgg
      121 caagggccgc accgggcctc gcttgcacgc caatttgttt gctcagcatg tacggaattt
      181 ccagaattcc tcgcaactcc tagtgcaggt gatggaggaa accaagggat tgatgtagtc
      241 tgcgctcatg ccagctttca tctgcacgac gtgcggtacg caacattcgc cctccgaggc
      301 tccgcccgct gcttgtctga tctgcaccga cgagcggcag ttcgtcccag catcgggcca
      361 gtcctggacc acgctcgagg gcttgcgcaa ggcgcacagc aacaagttcc gccgcctggc
      421 gacggggctt acgaccattg agaccacccc cgcatttggc attgggcagc gcgccattct
      481 ggtgcgcacg ccggctggca atgtgctgtg ggattgcatc gctctgatcg acgaggccac
      541 agtcgatgtg ctgaagggcc tgggcggcat tacggcgatc gcgatctccc acccccacta
      601 ttacaccacg atggtggagt ggagccgcgc cctcggggga gtgccgatct acctgcacgc
      661 ggccgatcgc gagtgggtga tgcgggcgga ccccgcggtg gagttctggc aaggagacac
      721 caagccaatc ggacaaggcc tcacgttggt tcggctggga ggacactttg acggtggcac
      781 cgtcctgcac tgggcggact ggggtgaagg tcgcggcgta ctgctgtcgg gcgacatcct
      841 gcaggtggtc ccgagcgggc acgtcagctt catgtggtca tacccgaacc tgatcccgct
      901 ctctgccgcc gaggtacggc gcatggccga catcttgcag ccgttcgcat tcgacgcggt
      961 ctacggcgcc ttctccgggc gggggcagat agacgcaaac g
//
LOCUS       DASRPQ010000227         1559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2217221, whole genome shotgun sequence.
ACCESSION   DASRPQ010000227 DASRPQ010000000
VERSION     DASRPQ010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1559
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2217221"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..410
                     /locus_tag="VFD73_02660"
     CDS             <1..410
                     /locus_tag="VFD73_02660"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI72920.1"
                     /translation="GNIVGGRIADKSVMGTIYRVLPGIAVALVVYAVAVHWPWSAFVM
                     VFVVGGAGSMLVPALQTRLLDASPDAPSLASSLNHAALNVANALGAFLGGVVIAWGWG
                     YVAPALVGAVLAILGLLVALLSGLLERKKPLAP"
     gene            complement(448..1401)
                     /locus_tag="VFD73_02665"
     CDS             complement(448..1401)
                     /locus_tag="VFD73_02665"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HZI72921.1"
                     /translation="MAANGGTKAIVAALAANLTIAVLKFVAFLLTRSSSMLAEAIHSV
                     ADSGNQVLLLVGGKRAQRAASPEHPFGYGRERYIYAFIVSIVLFSVGGLFALYEAWEK
                     IQHPHGIEGDFWWVPLAVLVGAIIAEGFSFRTAITEANHIRGSQGWISFVRTAKQPEL
                     PVILLEDFGALLGLLFALLGVGLTLLTGNGIWDGIGTGMIGLLLVAIAVILAMETKSL
                     LLGESATKDDVGRIRRAIEADGTTIIHLKTMHLGPEELLVAAKISVEAGDSGLGIAKA
                     IDDAEARIRSAVPIARVIYLEPDIRRAQVASGPALAGDPGA"
BASE COUNT          277 a          491 c          519 g          272 t
ORIGIN      
        1 tgggcaacat cgtcggcggc cggatcgcag acaagtccgt gatggggacc atctaccggg
       61 tcctgccggg aatcgccgta gcgctggtgg tgtacgccgt ggccgtgcac tggccttggt
      121 cggcctttgt catggtgttt gtcgtcggtg gtgccggttc catgctcgtc ccggccctgc
      181 agacccggct gctggatgcg tctcccgatg ccccgtcact ggcgtcctcc ctgaaccacg
      241 cggcgctgaa cgtcgccaac gcgctgggtg ctttcctcgg cggggtcgtg atcgcctggg
      301 gctggggtta tgttgcgccc gccctggtgg gtgcggtgct ggccatcctc ggcctgctag
      361 tggctctgct gagcggcctg ctggaacgca aaaaaccgct ggccccgtaa cggcagttcc
      421 ggaaccagcg gctcgtacgg cgagtagcta ggcgccggga tcgcccgcaa gggcgggccc
      481 gctggccacc tgggcacggc ggatgtcggg ctccaggtag atgacccgcg caatggggac
      541 ggccgagcgg atccgtgctt cggcgtcgtc gattgctttg gcaataccca ggccggaatc
      601 gcccgcctcc acgctgatct tggcggccac gagcagttcc tccgggccaa ggtgcatggt
      661 cttgaggtgg atgatggtgg ttccgtccgc ttcaatggcg cgccggatgc ggccaacgtc
      721 gtccttggtg gcggactccc ccagcagcag cgacttggtt tccatcgcca ggatcacggc
      781 gatggccacg agcaggaggc cgatcatccc ggtcccgatt ccgtcccaga tgccgttgcc
      841 ggtgagcagg gtcagtccca cgccgagcag ggcgaacagc aggccaagca gtgcgccgaa
      901 gtcttcgagg aggattaccg gaagctcggg ctgcttggct gtccgcacaa agctgatcca
      961 cccctggctg ccgcggatgt ggttggcctc ggtgatggcg gtccggaacg agaagccctc
     1021 ggcgatgatg gcacccacca gaacagccag gggcacccac cagaagtcac cttcgatgcc
     1081 gtgcgggtgc tggatctttt cccatgcctc atacagggca aacaggccgc cgacactgaa
     1141 cagcacgatg gaaacaatga acgcgtaaat gtaccgctcg cgcccgtacc cgaaggggtg
     1201 ctccggactg gcagcccgtt gcgcgcgttt gccgcccacc agcaggagca cctggttgcc
     1261 ggaatcggcc actgagtgaa tggcctcggc aagcatcgag gacgagcgtg tcagcaggaa
     1321 cgcgacgaac ttcaggacag cgatggtcag gttggcggcc agcgccgcga ctatcgcctt
     1381 ggtaccgcca tttgcagcca aggaaggctc acctcttaac gtggtatttc aacggatggg
     1441 acagggcggt atggaaccgc cgcctagtaa ataccgtacc cgtccggccg cagacagaca
     1501 ccgcagaggt gccttggcac gccacgaaaa aggcaaaact aagcctgctg acaaagaaa
//
LOCUS       DASRPQ010000228         1169 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_340594, whole genome shotgun sequence.
ACCESSION   DASRPQ010000228 DASRPQ010000000
VERSION     DASRPQ010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1169
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_340594"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..425)
                     /locus_tag="VFD73_02670"
     CDS             complement(<1..425)
                     /locus_tag="VFD73_02670"
                     /inference="COORDINATES: protein motif:HMM:NF024172.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI72922.1"
                     /translation="MGGGGSRRGLRRGRAQGPAGRSREKGRSGRRRRLTGAPGRGTLE
                     KHKPPIFGLIQRGGQLMIRMLANVQQKTIQPVITATVAPDSLIHTDEYDIYARLPAWG
                     YRHKTVCHGRGEYARDEDGDGFCEVHANTIEGVWSLLRS"
     gene            complement(323..814)
                     /locus_tag="VFD73_02675"
     CDS             complement(323..814)
                     /locus_tag="VFD73_02675"
                     /inference="COORDINATES: protein motif:HMM:NF024170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI72923.1"
                     /translation="MATVDPVNLASLLDDAKCFALVRQHRWPEGVRCPGCGSNAVVRN
                     GHDDTQLHRQRYRCQACASRFDDLSGTVLAGHHQPLRIWVLCLYFMGLNLSNRQIAAE
                     LGLGTSDVQFMTEQVRNGLVAKAPEVTLSGEVEVDEVYVVAGHKGQPAAVAKRGARAD
                     AAG"
BASE COUNT          211 a          399 c          362 g          197 t
ORIGIN      
        1 caggagcgga gcagtgacca gacaccctcg atagtgttcg cgtgcacctc gcagaagccg
       61 tcgccgtcct cgtcgcgggc atactcgccg cggccgtggc agactgtctt gtgccggtag
      121 ccccaggccg gcaggcgcgc gtagatgtca tattcgtcgg tatggatcaa gctgtccggg
      181 gcaacggtcg ccgtgatcac tggctggatt gtcttctgct gcacgttggc gagcatgcgg
      241 atcatgagct gaccaccgcg ctggatcagc ccgaagatcg gcggcttgtg cttctctagt
      301 gtgccccgtc ccggcgcacc cgtcagcctg cggcgtcggc ccgagcgccc cttttcgcga
      361 ctgcggccgg ctggcccttg tgcccggcca cgacgtagac ctcgtcgact tccacctccc
      421 ccgatagggt cacctcaggg gccttggcaa ccaggccgtt gcgcacctgc tcggtcatga
      481 actgcacgtc cgaggtgccg agacccagtt ccgcggcgat ctgccggttg gacaggttca
      541 gacccatgaa gtagaggcac aacacccaga tccgcagcgg ctggtggtgc ccggccagca
      601 ctgtcccgct gaggtcgtca aagcgcgacg cacacgcctg gcagcgatac cgctgccgat
      661 gcagctgcgt gtcatcatgc ccgttccgga ccaccgcgtt gctgccgcat ccaggacaac
      721 ggaccccctc tggccagcgg tgctggcgca ccaaggcaaa gcacttcgcg tcgtcgagca
      781 gggaggcgag gttgaccggg tccaccgtgg ccatgatgac agaaacccct cgtcttcgcc
      841 ggccaccgtc gaccgcctgg aaccctcatc atacccaaac ccaccgccac gagcctccat
      901 caccccggaa gccgataaga gccatctctg attctgctat gatattagcg ctttgatttc
      961 ggccaggaaa tcaaacgaaa atcaaacgag gggagaattc aatgccgcca ccggtgaaaa
     1021 tgccggtccg cgccgtgcgg gctgtctatg agaccagcaa cgcgtccatt cgggcgatcg
     1081 cgcgccgcta tggcatcagc gaccgcgcga tccgcaagcg agcagcggcc gagggctggg
     1141 accgcagccg tcgcgaggct ggggcgagg
//
LOCUS       DASRPQ010000229         2854 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3472030, whole genome shotgun sequence.
ACCESSION   DASRPQ010000229 DASRPQ010000000
VERSION     DASRPQ010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2854)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2854)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2854
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3472030"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..693
                     /locus_tag="VFD73_02680"
     CDS             <1..693
                     /locus_tag="VFD73_02680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72924.1"
                     /translation="GEWTVSPGAMGDHGRVFPVSQTVHDVIAERVERLPEELREVLIT
                     VALSGIGCRTEVLSHVHGISRLHAAADCDALVDRRLIVEDAGIYRCAHPVIAHVVRDG
                     LSVSRALELHRTLALALERALGSELDNAETAREIARHADRGGEPELAYRFALIAGQAA
                     IERYAFAEALSWLDLAATNAGDGPQADAVNRLTASVLEAAGWSEAPPPDDPGGPMTRE
                     LQTEDLDLPVRS"
     gene            771..843
                     /locus_tag="VFD73_02685"
     tRNA            771..843
                     /locus_tag="VFD73_02685"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:804..806,aa:Asn,seq:gtt)
     gene            complement(847..2421)
                     /gene="aceB"
                     /locus_tag="VFD73_02690"
     CDS             complement(847..2421)
                     /gene="aceB"
                     /locus_tag="VFD73_02690"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004474 - malate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase A"
                     /protein_id="HZI72925.1"
                     /translation="MTALTIHAPDHPDTAQIITPESLQFLELLVRHFGPRRQTLLQRR
                     RETQECLKSGALPDFLEETREVRERSWTVAPAPDDLNDRRVEITGPVERKMMINALNS
                     GARVFMADFEDALSPPWANVMAGQVNCREAVRRTLDYISPEGKQYQLAERLATLVVRP
                     RGWHLEEKHVRMNGEPISASLFDFGLYFFHNARELLARNSGPYFYLPKLENHLEARLW
                     NEVFDLSQDALGIPRGSIRATVLIETVLAAFEMDEILYELRDHAAGLNAGRWDYLFSI
                     IKNFRHRPEFLLPDRSQLTMTVPFMQAYTDLLIKTCHRRDAHAIGGMAAFIPSRRDPE
                     INETALRRVREDKLREARAGYDGAWVAHPDLVPVVTEVFTEVLGSKPNQKDRQRDDIA
                     IRRDQLLDVRVPGGRITEAGLRGNISVALQYLTAWLGGSGAVAINNLMEDAATAEISR
                     SQLWQWIHHQATTTDGEEITLARCRKILREEMGKLEGVGGDHERLAAAAELLDSLMAA
                     EVFPEFLTLAAYQRLS"
     gene            complement(2423..>2854)
                     /locus_tag="VFD73_02695"
     CDS             complement(2423..>2854)
                     /locus_tag="VFD73_02695"
                     /inference="COORDINATES: protein motif:HMM:NF014997.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HZI72926.1"
                     /translation="RALRTLDHIAIYFLIAGTYTPIALVTLHGRFGWSLLTAVWLIAM
                     AGIPFKLFFLDAPVWISTSTYLGMGYLALFAVPLIARVVPWSGLLWLVMGGAAYTVGA
                     IIYSRERPNPFPGLLGHHEIWHVLVLIGSACHFAFMVYHVA"
BASE COUNT          557 a          889 c          866 g          542 t
ORIGIN      
        1 ggagagtgga ccgtcagtcc cggtgcgatg ggcgatcacg gtcgagtctt tccggtctct
       61 caaacggtcc acgatgtgat cgccgagcgg gtcgagcgac taccggaaga attgcgagag
      121 gtcctcatta cggtggcact ctcgggcatc gggtgccgca ccgaggtgct atcccacgtc
      181 cacggcattt ctcgactgca cgccgcggcc gactgcgatg cgctggtaga ccgccggctg
      241 attgtggaag acgccgggat ctatcgctgt gcgcatccgg ttatcgccca cgtggttcgt
      301 gacgggttga gcgtatctcg agcgctggag ctgcatcgaa cgctggccct ggcgctcgag
      361 cgtgccttgg gctcagagct ggacaatgca gaaacggccc gggagattgc acgtcacgcc
      421 gaccgggggg gcgagcccga actggcctac cgctttgccc tcattgctgg ccaggcggca
      481 atcgaacgct acgcttttgc cgaggcactg tcctggcttg atttagcggc aaccaatgcc
      541 ggcgacggtc cccaggctga tgcggtaaat cggctgacag ccagcgttct ggaagccgcg
      601 gggtggagtg aggcgccgcc gccggatgat ccaggtggtc caatgactcg agagctccag
      661 accgaagacc tcgacctgcc cgtcagaagc tagcccccag tctggccttg accttgctgg
      721 tcgggcacgg ctaaagtccc ctccccttcg tatccgtcca gtcattctct tggggtgtag
      781 ctcaattggc agagcgcccg gctgttaacc gggaggttgc tggttcgacc ccagccgccc
      841 cagctcctag ctcaacctct gatacgctgc cagcgtcagg aactctggaa agacctctgc
      901 cgccatcagc gagtccagca gctcggctgc agccgccagc cgctcatggt cgcctcccac
      961 cccctccagc ttccccatct cttcccgcag aattttccgg caacgagcca gagtgatctc
     1021 ctcgccatcg gtggtcgtgg cctggtggtg aatccattgc cagagctgag accgggagat
     1081 ttccgcggtg gcggcgtcct ccatgaggtt gttgatggca acggcgcctg agccaccgag
     1141 ccaggcggtc aaatactgga gtgccacact gatgttgcct cggagccccg cctccgtgat
     1201 acggcctccg ggaactcgga catcgagcag ctgatcccgc cggattgcga tatcgtcccg
     1261 ctgccggtct ttctgattgg gcttcgatcc gaggacttcc gtaaagacct cggtgaccac
     1321 cggcaccaga tcgggatgag caacccaggc tccgtcgtag cccgcgcgtg cttccctcag
     1381 cttgtcctcc cgaactctcc ggagcgcggt ctcgttgatc tccggatccc gacggctggg
     1441 aataaacgct gccatgcccc caatcgcatg agcgtcccga cggtgacatg tcttgatcag
     1501 cagatcagtg tacgcctgca taaacggaac tgtcatcgtc agctgggacc ggtcgggcaa
     1561 gagaaactca ggccggtgcc gaaagttctt gatgatgctg aagagatagt cccatcgccc
     1621 tgcgttcagc ccggctgcgt gatccctcag ttcgtagaga atttcatcca tttcgaacgc
     1681 ggccagaaca gtttcgatta aaaccgtcgc ccgaatgctc cctcggggaa tgccgagcgc
     1741 atcctgagag agatcgaaca cctcgttcca gagcctggcc tcgagatgat tttccaattt
     1801 gggcaggtag aaataaggcc cgctgttgcg ggccagaagc tctcgggcat tgtgaaagaa
     1861 gtagagaccg aaatcgaaca agcttgccga gatcggctcc ccgttcatcc gaacgtgctt
     1921 ctcctcgagg tgccatcccc gggggcgcac caccagggtc gccagccgct ctgccagctg
     1981 atactgcttt ccttccgggc tgatgtagtc cagggttcgc cgcaccgcct cccggcagtt
     2041 gacttgtccc gccatgacat tggcccaggg cggtgacaac gcatcttcga agtcggccat
     2101 gaagacgcgg gcgcccgagt tcagtgcatt gatcatcatc ttgcgttcga ccgggcccgt
     2161 aatctcgacc cgtcgatcat tcagatcgtc cggagccggc gctaccgtcc agctacgctc
     2221 gcggacctcg cgggtctcct ccagaaaatc cgggagagca ccggatttga gacactcctg
     2281 cgtttcccgc cggcgctgaa gcagcgtctg ccgccgaggg ccaaaatgcc ggaccagcag
     2341 ctcgaggaac tggagtgact cgggcgtgat gatctgggca gtatcgggat ggtcgggggc
     2401 gtgaatggtt aaggcagtca tgtcacgcga cgtgatacac catgaaagca aagtgacagg
     2461 cgctgccgat gagcaccagc acatgccaga tctcgtgatg cccgagcagg ccagggaatg
     2521 ggttgggacg ttcccggctg taaatgatcg ccccgactgt gtaggcagcc ccacccatca
     2581 ccagccacaa aaggccggac caggggacaa cccgggcgat caatgggacg gcaaacaggg
     2641 cgagatatcc catgcccaga taagtgctgg tggaaatcca gactggtgca tcgaggaaga
     2701 acaatttgaa cggaatgcct gccatggcga tcagccacac tgcggtgagc agactccagc
     2761 cgaaccgccc gtgcagcgtt accagcgcga tcggagtgta tgtgccggcg atcagaaagt
     2821 agatggcaat gtgatccagc gtgcggagcg ccct
//
LOCUS       DASRPQ010000230         3231 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2844733, whole genome shotgun sequence.
ACCESSION   DASRPQ010000230 DASRPQ010000000
VERSION     DASRPQ010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3231
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2844733"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1177
                     /locus_tag="VFD73_02700"
     CDS             <1..1177
                     /locus_tag="VFD73_02700"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HZI72927.1"
                     /translation="GDKIAIGTHELRVVDSTRGGSTQLFDSGAFTDLVPPKSTKPPAG
                     TTNGRLVCLTDGREYKMGDGPLTLGRDAASDVVVSGSEVSRQHAEIRPDPQGYLLVDV
                     SVNGTYVNGERIAKTHRLARADVIRIGNDEFRFYADSPPAPAPSARPEVSPRSPQPAG
                     AAHRLSDTMMGIPTTAPARTAAPVQPPSSSQAAPAPAPAPASPAAPPLASLLLRSGQL
                     KGERLPIKVPVVNIGRGDFNDVILADPSVSTMHAKLQRRDAIWILTDLGSTNGTYIDG
                     ERLTGEAPLSPGTTIKFGDIVALFEPLDESARTEPGDRTRMMDRIVVPDPVRAPEPKR
                     PADAMPAEEPAVQAERPRPRSRRPIHVSTPRPRSPSTLTVVGLLILVVILAYLLASF"
     gene            1187..1972
                     /locus_tag="VFD73_02705"
     CDS             1187..1972
                     /locus_tag="VFD73_02705"
                     /inference="COORDINATES: protein motif:HMM:NF033484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HZI72928.1"
                     /translation="MHFTCAARTDVGIVRSGNEDNYLMLADHGIFIVADGMGGHAAGE
                     VASEMAVRITSQAIGSLRGLSDEEAGERVRSAIRAANDAIFERTLSEQDKRGMGTTAT
                     VLVLLPNRYLIGQVGDSRAYLFRDGQFQQLTKDHSYVQEQVDAGLLTPDQARVHPYSN
                     VITRCVGAGIDVVPDIYFGTLEKGDVLLLASDGLTGMLEDEHLLQILRLDGGPQAWVD
                     RMVAEANRRGGLDNITAIIIRIDSVDSDTGEHPTVPAAASQGS"
     gene            complement(1973..2425)
                     /locus_tag="VFD73_02710"
     CDS             complement(1973..2425)
                     /locus_tag="VFD73_02710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72929.1"
                     /translation="MEDHRVLKEAPDHHDADLVLKIYDLRREAVMRESRSAINAKYWP
                     RSAEEAIAVTASDHPLNTAFRQTAGYWEMVYGMARHGIVHPDFLVENNGEGLFLFARV
                     EPYLAALRSAASSRSFRNAEWVATNCAAGKMLMESFRAGVKRALEARS"
     gene            2526..2786
                     /locus_tag="VFD73_02715"
     CDS             2526..2786
                     /locus_tag="VFD73_02715"
                     /inference="COORDINATES: protein motif:HMM:NF016141.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HZI72930.1"
                     /translation="MDVLTWIIVGLVAGLLASLVMGGIGYGILGDIIIGILGALFGGW
                     LFARMGWSTPFAGIAGTIFVAFIGAVVLLLILRLLRGARRAP"
     gene            complement(2722..>3231)
                     /locus_tag="VFD73_02720"
     CDS             complement(2722..>3231)
                     /locus_tag="VFD73_02720"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI72931.1"
                     /translation="PYRQEFRSAFERLNREWIETWFEVEDEDREVFRNPEAKILAAGG
                     QIFFVLRQGEVLGTCAVIPHSPREWEIAKMAVASAARGQGLGDLLMDVAIDFAHSVKA
                     RRVIIVSNTALQPAIRLYQKHGFQVVPMIDDGRYRRANIRLELELDATEPSGRPGAAG
                     ESAAEPRHQ"
BASE COUNT          583 a         1041 c         1017 g          590 t
ORIGIN      
        1 tggagacaag attgcgattg ggacgcacga acttcgggtg gtcgactcga cccggggtgg
       61 cagcacgcag ctcttcgatt ccggggcgtt caccgatctg gttcccccca agagcaccaa
      121 gccgcctgca gggactacca atggccggct ggtatgtctc accgacggca gggaatacaa
      181 gatgggcgac ggaccgctca ccctggggcg ggatgccgcg tcggacgtgg tggtctcggg
      241 aagcgaggtc tctcggcagc atgcggagat ccgtcccgat ccgcaaggct atctcctggt
      301 cgacgtcagc gtgaacggca cctacgtcaa cggggagcgg attgccaaga cacaccgact
      361 cgcgcgggcg gatgtgattc ggatcgggaa cgacgaattt cggttttacg ccgactctcc
      421 accggcccca gcaccctccg cgcggcccga ggtctcgccg cggagcccgc agccggcagg
      481 ggcagcccac cgactttcgg acaccatgat gggcatcccg accacggctc cggctcggac
      541 tgcggcgccg gtgcaaccgc cttcgagctc ccaggcggcc cccgctccag ctccggcacc
      601 cgcgagcccg gcggcacccc cactcgcctc cttgctgctt cgcagcggac agctcaaggg
      661 cgagcgcctt ccaatcaagg tgccggtggt caatatcggg cggggcgatt tcaacgatgt
      721 gattctcgcg gacccgagcg tgagcaccat gcacgccaag ctgcaacgcc gggacgccat
      781 ctggattctg accgatctgg ggtcgaccaa cggcacctac atcgacggcg agcgactgac
      841 cggtgaagca cccctcagtc caggcaccac aatcaaattc ggggacatcg tggctttgtt
      901 cgagccactc gatgagtcgg cccgaacgga accgggcgac cgcaccagga tgatggatcg
      961 catcgtggtg ccggacccgg tacgcgctcc ggagccgaaa cggccggccg atgccatgcc
     1021 cgccgaagaa ccagccgtcc aagcggagcg gccgcgcccg cggtctcggc gcccgattca
     1081 tgtttccact ccccgtccga gaagtccctc gacgctgacc gtcgttggat tgctgattct
     1141 ggttgtaatt ctggcctacc tgttggcgag cttttaacgg agtcccgtgc acttcacctg
     1201 cgccgctcgc accgacgttg ggatcgtccg ttcgggcaac gaagacaatt atctgatgct
     1261 cgccgaccat ggcatcttca tcgtggccga tggcatggga gggcacgctg ccggagaggt
     1321 cgccagcgag atggcggtgc ggatcacctc gcaggcaatc ggctcgctcc gcggcctcag
     1381 cgatgaagag gcgggcgagc gagtgcgaag cgcgattcgg gcggccaacg acgccatctt
     1441 cgagcgaacg ctttcagagc aggacaagcg agggatgggc accaccgcaa cggtgctggt
     1501 gctcctgccg aaccgctatc tgattggcca ggtcggagac agccgggcgt accttttccg
     1561 cgacggccag ttccagcagc tcaccaagga ccactcgtat gttcaggagc aggtcgatgc
     1621 cgggctgctg actccggacc aggcgcgggt ccatccctac agcaacgtca tcacccggtg
     1681 cgttggcgcg gggatcgacg tggttcccga catctatttc ggaacgctgg agaaaggaga
     1741 cgttctcctg ctcgcttccg acggtttaac cgggatgttg gaggacgagc acctgcttca
     1801 gatcctccgg ctggacggcg gccctcaggc ctgggtggac cgcatggtgg cggaggcgaa
     1861 tcgccgaggc gggctggaca acatcactgc cattatcatc cgcatcgatt cggtcgacag
     1921 cgataccggc gagcatccga ccgtgcccgc ggcggccagt caaggctcct gatcagctcc
     1981 gggcttcgag cgcccgcttg acgccggctc gaaagctttc catcaacatc tttcccgccg
     2041 cgcaattggt ggcgacccat tccgcgttcc gaaatgagcg ggaagaggcg gcgctgcgca
     2101 gcgcagcgag atagggttcc acccgggcaa acaggaacaa gccctctccg ttgttttcga
     2161 ccaaaaaatc ggggtgcacg atcccgtggc gggccatccc gtaaaccatc tcccagtagc
     2221 cggcggtctg ccgaaaggcg gtgttcaggg gatggtcact ggcggtgacg gcgatcgctt
     2281 cctcggcgct ccggggccaa tacttggcat tgattgcgga ccgagactcg cgcatcaccg
     2341 cctcgcgccg gagatcgtag atcttcagga cgaggtcggc atcgtgatgg tcgggagctt
     2401 ccttcaacac gcgatgatcc tccatggttc gggagagcta gccagctcag gtttccgggc
     2461 acatactcaa gtcccgcctg atggctcagg attgagcttc actcctggaa agcaagcgag
     2521 gcctcatgga cgttctgacc tggattatcg taggactggt cgccgggctc ttagcctcgc
     2581 tggtgatggg aggcatcggc tacgggattc tgggtgacat catcatcggg attctgggcg
     2641 cactgttcgg tggctggctc tttgcccgaa tgggctggag cactccgttt gcggggattg
     2701 cgggcacgat tttcgtcgcc ttcattggtg ccgtggttct gctgctgatt ctccggctgc
     2761 tccggggcgc ccggagggct ccgtagcatc gagctccagt tccagccgga tgttcgccct
     2821 acggtaccgg ccatcatcga tcatcggcac tacctgaaat ccgtgcttct ggtagagccg
     2881 gatggcgggc tgcagagccg tgttggagac gatgatgaca cggcgcgcct ttaccgaatg
     2941 cgcgaaatcg attgccacgt ccatgagcag atcgccaagc ccctggcccc gcgccgctga
     3001 tgccaccgcc atcttggcga tctcccactc ccggggacta tgggggatga ccgcgcaggt
     3061 ccccagcact tccccctgtc gcaagacgaa gaagatctga ccgccggcag ccagaatctt
     3121 tgcttccgga ttccggaaca cctctcggtc ctcatcttcg acctcgaacc aggtctcaat
     3181 ccactcgcgg ttcagccgtt cgaaagcaga cctgaattcc tggcgatacg g
//
LOCUS       DASRPQ010000231         1095 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2844757, whole genome shotgun sequence.
ACCESSION   DASRPQ010000231 DASRPQ010000000
VERSION     DASRPQ010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2844757"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..226
                     /locus_tag="VFD73_02725"
     CDS             <1..226
                     /locus_tag="VFD73_02725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72932.1"
                     /translation="SRESAAERPGTPAATAAQAEVTSPPWYQFLTIAGRWRNQQRPDL
                     RRTEPCRAGRYGGAPASASAGAITGASALA"
BASE COUNT          186 a          375 c          340 g          194 t
ORIGIN      
        1 cagccgagag tctgcggctg aacgcccagg caccccggcg gccactgccg cccaggccga
       61 agtgaccagc ccgccttggt atcagttcct gacaatcgcc gggcgctggc gtaatcaaca
      121 gcgtcctgat ctgcggcgca ccgagccttg ccgtgcaggc cggtacggtg gcgccccggc
      181 gtcggcgtca gcgggggcaa tcaccggcgc tagtgcgctg gcctgacacc tcgtgcgacg
      241 gcgagcgacc tggcgggcat ggcagccagc gtcagctcca ccgccagtcg gtagctaacg
      301 gcccagccgg gtgggcacag gcccgtccca atgaccatga gcaagtcgct cgatcaggga
      361 tcttaggtcc cagatccctg gtgcagaatg gccaattcga gggtgaggca tggacggcca
      421 ggcacgaccg ggaaggcatg ccgaacggca gttatatgcg caggctggca aggttcaagc
      481 tgactacctt gcgcaatggc gcgcgacaaa cgccccgcat cggcaccgcg gtgtccgaga
      541 tgctttcgtt gaattcgagt atggctgcgt ctcgcgctct tggttgccgc atgccacagg
      601 cagacgtccg gcggacctgg cccgacactc gtcgcggcta ccgcgttccg gctcgttcag
      661 cacgaacgcg atgagatcgg cggccatttg ggggtatctc tgggctaagc gcccggcgac
      721 cgagggcggc agcgtccgcc acgtccacgc tgtctcatcc cgtgccatcc cgtctccccc
      781 gtctcgccgc caggccgcgc cgagccttac tcttactaca gtgcccagca cgcaaaagac
      841 ccttctccta ataggaaaag ggtcttgacc tgcgggaact agtagcgggg gcgggatttg
      901 aacccgcgac ctctgggtta tgagcactac gacgcacgtc tcccccgtct ccggcgttcc
      961 gccgcgtctc gctgagctgg cgaaaggcct cggaaagcgt ctccgatgtc tcgtatcgtc
     1021 tcccccatcc ctgacggtct cgttagcaaa tccgttagcc gatacgttcc tcaagctgcg
     1081 gctttctggc tcctc
//
LOCUS       DASRPQ010000232         1092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_964384, whole genome shotgun sequence.
ACCESSION   DASRPQ010000232 DASRPQ010000000
VERSION     DASRPQ010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_964384"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            541..>1092
                     /locus_tag="VFD73_02730"
     CDS             541..>1092
                     /locus_tag="VFD73_02730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72933.1"
                     /translation="MLDPLPSGMGPSSQLRAAIAALSAHLAIVLAAVYGTAQPLVAPA
                     VTRRDTVLIELPTMPSGEVTERGGSVPTAPRLPTAPLLPVVPLDQPTPTVSLTVAADA
                     GALAALREAAVADVGTLGTASDETPALPVSALDELPALLNDLRPRYPEQLRAATVNGE
                     VVVEYVIDSNGRVLANSIRTIRSD"
BASE COUNT          199 a          361 c          339 g          193 t
ORIGIN      
        1 tcaccgtgca gagtcgcccg gggcggggat cggtgtttac cgttcgcctg cccaagtctc
       61 ctgcagcaac tgcctgagcg actgctcaaa gccaacagct gagatcgtgg gtgttgggcg
      121 ggggagacct ctcgtcctcg ggcgccggcg caaccgctac gctcccgctt ccccgtccaa
      181 gggcgagagg cggttgctaa cgcgccctgc ggtcgagaag tccccccgcc cgccagcatc
      241 acggggagag tgggaaggaa agctctctac tgatacaggg agtggcgtgt ggccgggagg
      301 gacaccctgg agcgcgcgtt agcaagcgcc ggtatacctg gtacgaggta gcgcgagcgt
      361 agcggttgcg ccggtccgcg gaacgggtgc cctcccgcca cacatccaaa cggaatcatt
      421 attggggatc gtctatgtcg ggtgcgacct ctcaccaagc agtcattctc ccgtcatcca
      481 tcgttcacca cggttccacg ctgaggcgct aggtatcaga agacctcgcg ggagcctgaa
      541 ttgctcgatc cactgccatc cgggatgggg ccaagctcgc agcttcgtgc tgcaatcgct
      601 gcgctgtcgg ctcacctggc catcgtcctt gccgccgtct acggaaccgc tcagccgctc
      661 gtagctccag ctgtgacccg ccgcgatacg gtgctcatcg agctgcccac gatgccgagc
      721 ggagaagtaa cggagcgtgg cggcagtgtt ccaaccgcac cacgactgcc gactgcacct
      781 cttctccccg tcgttccgct cgaccaacca actccaacgg tgtctctcac cgttgctgcg
      841 gacgccggcg cactagcggc actgcgcgaa gcagcggtcg cagacgtggg cacacttgga
      901 accgcgtcag atgaaacacc ggcgcttccg gtgagcgccc tcgatgagct tccagccttg
      961 ctcaacgatc tcagaccgcg ctatccggaa cagctccgag cggcaaccgt caatggtgag
     1021 gtcgtggtcg agtacgtcat cgatagcaac gggcgggttc tggcgaactc gatccggaca
     1081 atacggagcg at
//
LOCUS       DASRPQ010000233         1190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1278229, whole genome shotgun sequence.
ACCESSION   DASRPQ010000233 DASRPQ010000000
VERSION     DASRPQ010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1278229"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..488
                     /locus_tag="VFD73_02735"
     CDS             <1..488
                     /locus_tag="VFD73_02735"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HZI72934.1"
                     /translation="TMRAQTNGPEVTAPGDDRVTWLGALMRKTSIDELPQMLNVLLGH
                     MTLVGPRPESVTLARRYPEELRFIFRHRPGVTGPCQVLVRDEKVLGWAADVEKFYLTK
                     LLPHRVDMDLAYLKDPTLARTVRWLVITFLYLVRTAQPKPAAGQPEFAGAAALVRPTD
                     D"
BASE COUNT          221 a          405 c          376 g          188 t
ORIGIN      
        1 gcaccatgcg ggcccagacg aatggccccg aggtgactgc ccccggggac gaccgggtga
       61 cctggctcgg ggcgctcatg cgcaagacga gcattgacga gctgccgcag atgctgaacg
      121 tgctactcgg ccacatgacg ctggtcggcc cgcggcccga gtccgtcacg ctggcccggc
      181 gctaccccga ggagctccgg ttcatcttcc ggcaccgccc cggcgtcacc ggcccgtgcc
      241 aggtcctggt ccgcgacgag aaggtcctgg ggtgggccgc ggacgtggag aagttctacc
      301 tgaccaagct tcttccgcac cgggtggaca tggatctcgc ttatctgaag gacccgacgc
      361 tggctcgcac cgtccggtgg ctggtcatca cgttcctgta cctggtgcgg acggcgcagc
      421 cgaagccggc cgcgggccag cccgaattcg ccggggccgc ggccctagtc cggccgaccg
      481 acgactgaaa cctcgcgtaa ccgcgagcgc ccagggcggg cgaggctgct cgcccgccct
      541 gggcgagcag cctcgctgcc tgcacccgcg tgcgcggaac acgaaagtca tagccgggaa
      601 acggcaatgg cagcctcact ctgcctccaa acccagccga tctccgtatc tccattcgct
      661 caactggaat tcaatgcgga gcatccgggc aacgcggaaa ttccggagtc tataacttgc
      721 gcatccgaat aggaacgcca ccgccgtgcg gaccatatag aaatgctgcc gaggcagcga
      781 ctgagatcat tgagcccgag gccgcggaaa cgagatccgg cattgcgcgg gacaggaatg
      841 cgtggcagga ttgcggagta ctggtgaagt tccgctcacg gatacgaatt cctgtggccg
      901 ccgtcttgat catgctggtg gctgtaagcg ctggatgcca atcttcgcgc cctttggcga
      961 gcggagcgtc cacggccccc ggatcggtcg cggccacgca cccgacgtca caggaatcgg
     1021 ccagttctcc ggcgccggga acgcatccgc acgtcatggt catcgttgac gagaaccaca
     1081 gccagcagca agtcatcggt aatgcccaga tgccgtacct caacagcctg gtaacccggt
     1141 acggcctcgc aacgcgctgg aatgatctgt cccacccgag cctgcccaat
//
LOCUS       DASRPQ010000234         1146 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_25018, whole genome shotgun sequence.
ACCESSION   DASRPQ010000234 DASRPQ010000000
VERSION     DASRPQ010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25018"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..241
                     /locus_tag="VFD73_02740"
     CDS             <1..241
                     /locus_tag="VFD73_02740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72935.1"
                     /translation="QKAGKVVHAWAWEGDADASAIVSNTARVEWPPGSGRWLTYPEVD
                     RCAWCDPDSARRRINAAQAALIDRLEVTLRGGASD"
     gene            complement(448..801)
                     /locus_tag="VFD73_02745"
     CDS             complement(448..801)
                     /locus_tag="VFD73_02745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72936.1"
                     /translation="MTTIDEKEAQTFCQRAALELAALINHQRKPRGRLRRDSVLLRRF
                     ISVVLGAGLPMHLLQGGPWKVATKPLKKPGRGGLDFIPLVRRGDTTIMVSTPQEAEEM
                     VAFLNYCGMSEFAAG"
BASE COUNT          208 a          338 c          400 g          200 t
ORIGIN      
        1 tcagaaggcc ggcaaagtgg tgcacgcgtg ggcctgggaa ggcgacgcgg acgcgagcgc
       61 gatcgtcagc aataccgcgc gggtggagtg gccgccgggg tcgggccgtt ggttgactta
      121 tcccgaggtc gatcgctgcg cctggtgcga tccggactcg gctcgccggc ggatcaatgc
      181 cgcgcaggcg gcgctgatcg atcggctgga ggtgacgctg cgtggcgggg cgtcggactg
      241 agcacagaag cgcggaagga ggggtgtgtc gaaccgagcg aatcgggagt gcgtgtcatg
      301 cggaatgcca atcacgctgt gtcccagtca gtgctgaatc ccgtcaggct gaatttcggt
      361 caggtcgaat ttcggtcagg ctgaatcccg gtcaggctga gtcccggtca ggctgagtcc
      421 cggtcaggct gagtcgcggc caggcactca gccggcggcg aattcactca tgccgcaata
      481 gttgaggaac gcgaccatct cctccgcctc ctgcggagtc gagaccatga tcgtcgtgtc
      541 gccccgccgc accagcggga tgaagtcgag gccaccccgg ccgggcttct tgagcggctt
      601 ggtcgccacc ttccagggcc caccctgcag cagatgcatc ggcagtccag cacccaacac
      661 caccgaaatg aaacgccgca gcaacaccga gtctcgccgt agccgtccgc gcggcttgcg
      721 ctggtggttg atcaacgccg ccagttcgag cgccgcccgc tggcagaagg tttgagcctc
      781 tttttcatcg atagtggtca cgatgagacg ctaccaggaa atcggctccg cgtcaaaccg
      841 tgtgacccgg ctcacccgca atcgagaggc accgggtgtg agttggaacc cggcggacct
      901 cgcaggaatt gggttacggt atgaatcaag caacctcgca cgttgcccat ggcatcgatg
      961 cgaggagcgc aacggaagag cattgggcaa acggaagggc acgatgatag acggaaatgt
     1021 catggtatgg agtgcggcgg tcggggtttc cgccgagcac ctgtcgcgta cgctggcggt
     1081 ggtgatgggc ggctcgtgga tcgccctcct gtttcacgag ttggggcacg cgtttgcggc
     1141 gtcggc
//
LOCUS       DASRPQ010000235         1374 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_25298, whole genome shotgun sequence.
ACCESSION   DASRPQ010000235 DASRPQ010000000
VERSION     DASRPQ010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1374
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25298"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..718
                     /locus_tag="VFD73_02750"
     CDS             <1..718
                     /locus_tag="VFD73_02750"
                     /inference="COORDINATES: protein motif:HMM:NF014533.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030420 - establishment of competence for
                     transformation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HZI72937.1"
                     /translation="VCRQASATVARAGAVVVSGMARGLDAIAHSAALDAGGTTIGVLG
                     NGHGVIYPSANRALYERVAQHGLLLSEFPPGERPHAGSFPRRNRLISGLSRVTLVVEA
                     AAGSGALITAGTALDQGREVMAVPGNITSPVSVGTNRLIRDGAAPLLEPTDLLQHFPE
                     FPAPTAEKWGPVPAISSLPDTLSPEERELAGFLDSDPIHPDELAGRSRRPITEVLSLL
                     GGLEIAGVVEQGPGRVFRRV"
     gene            733..>1374
                     /locus_tag="VFD73_02755"
     CDS             733..>1374
                     /locus_tag="VFD73_02755"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HZI72938.1"
                     /translation="MHVYVHVPFCARRCSYCDFAIAVRREVPSEAFLCAVLKEWGLWQ
                     ATPIWDHSRAIETIYLGGGTPSRLAPSAVASLLDALARDRPVRAHAEITLEANPDDVT
                     PAAARAWMAAGVNRISLGVQTLDSGVLRWMHRTHTAAQTSVAVEVLRAAGLQNLSLDL
                     IFGLPSELGRDWARDLDLVLALEPEHLSWYGLTVEPRTPLGRWTERGEVAPVSE"
BASE COUNT          211 a          448 c          450 g          265 t
ORIGIN      
        1 ggtctgccgc caagcttctg caaccgtagc cagggctggc gcggttgtcg tcagcggcat
       61 ggctcggggg ctcgacgcca tcgctcacag cgccgcgttg gatgccggag gcacgacgat
      121 tggtgttctg ggaaacgggc acggggtcat atacccgtct gccaatcgag cgctctacga
      181 gcgggtggcc cagcatggtc tgctcctcag cgagttccca cccggcgaga ggccacacgc
      241 cggcagcttc cctcgccgca accggctcat cagcgggctc tcacgagtca ccctggtggt
      301 cgaggcggcc gccggctctg gagccctgat caccgccggt acggcactcg atcagggcag
      361 agaggttatg gccgtgcccg gaaatatcac gagcccggtc tcagtgggca ccaatcgcct
      421 gatccgtgat ggggcggcgc ccctgctcga gcccaccgat ttactgcagc actttcccga
      481 gttcccggct ccaaccgcgg agaagtgggg gccggtgccg gccatcagct ctttgcctga
      541 tactctctcc ccggaagagc gagagctcgc cgggtttctc gattccgacc cgatccatcc
      601 ggacgagctg gccggccgat cccgtcgtcc catcaccgag gtgctgagcc tgctgggcgg
      661 gctggagatt gccggggtgg tcgagcaagg ccctggccgg gtctttcgaa gagtctagcc
      721 tacatttccc caatgcacgt gtacgtccac gtccctttct gcgcccgccg gtgcagttac
      781 tgcgattttg ccatcgcggt tcgtcgtgag gtgccgtcgg aggcatttct gtgcgcggtg
      841 ttgaaggaat ggggcctctg gcaggcgaca ccgatctggg accactcgcg ggcaatcgaa
      901 accatttatc tgggcggagg cacgccttcc cggctggcgc caagcgccgt cgcctcgctt
      961 ctcgatgccc tagccagaga ccggccggtg cgggctcatg cagagatcac tctcgaagcc
     1021 aacccggatg acgtgacccc agccgctgcc agggcctgga tggcggcggg ggtgaaccga
     1081 atttccttgg gagttcagac tctggattcg ggcgtgctcc ggtggatgca tcggacccac
     1141 actgctgcgc agaccagcgt cgcggttgag gtccttcgcg cagcgggcct ccaaaacctg
     1201 tctctcgatt tgatctttgg cctgccatcg gaactcgggc gcgactgggc ccgggatctc
     1261 gacttggttc tggcattgga acctgagcat ctctcgtggt atggacttac cgtggagccg
     1321 cgtaccccgc tcggccgctg gaccgagcgc ggtgaggttg ctccagtctc ggag
//
LOCUS       DASRPQ010000236         1121 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1278873, whole genome shotgun sequence.
ACCESSION   DASRPQ010000236 DASRPQ010000000
VERSION     DASRPQ010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1278873"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..318)
                     /locus_tag="VFD73_02760"
     CDS             complement(<1..318)
                     /locus_tag="VFD73_02760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72939.1"
                     /translation="MTQVLSWRAVPAPIRTVARWITIVQVVGYTTSLLFIHHTTGMTP
                     AGVAARYRGSAADTSDAAMQFPKSFAEMLTITHTHLLSMAVIFVLSGLALALCIHPPE
                     RWRR"
     gene            complement(315..824)
                     /locus_tag="VFD73_02765"
     CDS             complement(315..824)
                     /locus_tag="VFD73_02765"
                     /inference="COORDINATES: protein motif:HMM:NF016121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein"
                     /protein_id="HZI72940.1"
                     /translation="MAISSSGRAAVAVATLTLCLATIGRTQAAPPKKLAASVTRIYGP
                     GTTVDTLSVDSARVLRISRAGALLGFAQVRNVKGKDQPITFLVAIDSVNALKDIDVLV
                     YREPYGGEVAYEPWRKQFRGKTSAAPLEVGKDIRNVSGATISSHSVTLGVRKALADLT
                     AWHQAGRIK"
     gene            complement(808..>1121)
                     /locus_tag="VFD73_02770"
     CDS             complement(808..>1121)
                     /locus_tag="VFD73_02770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72941.1"
                     /translation="YGNQVGSRISGGYLEAAYNVLSLFAPASSQRLNSFVRYERFDTQ
                     ADVPAGLTRDESLARQITTFGLAYKPLYNVVFKGDYQVQRTRSGLAEGELLSLGIGYQ
                     F"
BASE COUNT          216 a          348 c          361 g          196 t
ORIGIN      
        1 ccggcgccag cgctctggag gatgaatgca gagagccagc gccaggccac taagcacgaa
       61 gatcaccgcc atgctcaaca gatgcgtgtg ggtgatcgtc agcatttccg caaacgactt
      121 ggggaactgc atggcggcgt ccgatgtgtc cgcggccgac ccccggtaac gggcagcgac
      181 cccagccggg gtcatgccgg tggtatggtg gatgaagagg agtgacgtgg tatagcccac
      241 gacctggacg atggtgatcc agcgggccac cgtccgaatc ggcgcgggga cagcacgcca
      301 ggagaggacc tgagtcattt gattctgccg gcctggtgcc aggccgtgag atcggcgagt
      361 gccttgcgca ccccgagtgt taccgagtgc gagctgattg tggcaccgga gacgttccga
      421 atgtccttcc ccacctccag cggcgcagcg ctcgtcttgc cccggaactg tttccgccac
      481 ggctcatacg cgacttctcc gccgtacggc tcgcggtaga ccagcacgtc gatgtccttg
      541 agcgcattga cggagtcgat tgcgacgaga aaggtgatcg gctggtcctt gcccttcaca
      601 ttgcggactt gggcaaaccc caggagtgcc ccggccctgg agatcctgag gacccgggcc
      661 gagtcgacgc tgagagtgtc caccgtggtg ccgggaccat agatacgcgt gaccgacgca
      721 gcgagcttct tcgggggtgc cgcctgggtc cggccaatcg tagccagaca gagtgtcagc
      781 gtcgcaacgg cgaccgctgc acggccgcta gaactgatag ccaatgccca gactcaacag
      841 ctcaccctcg gccagaccgg accgagtgcg ctgtacctgg tagtcgcctt tgaagaccac
      901 gttatacagt ggcttatagg ccagtccgaa agtggtgatc tgccgcgcca gtgactcgtc
      961 ccgtgtaagt cccgcgggca cgtcggcctg ggtgtcgaac cgctcgtatc gcacgaagct
     1021 gttcaaccgc tgactcgagg ccggcgcgaa aagagaaagc acattgtacg ccgcttcgag
     1081 gtagccgccg gaaatccggc ttccgacctg attgccatag g
//
LOCUS       DASRPQ010000237         2092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_965623, whole genome shotgun sequence.
ACCESSION   DASRPQ010000237 DASRPQ010000000
VERSION     DASRPQ010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_965623"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1821)
                     /gene="uvrA"
                     /locus_tag="VFD73_02775"
     CDS             complement(<1..1821)
                     /gene="uvrA"
                     /locus_tag="VFD73_02775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HZI72942.1"
                     /translation="MAQDSLVVRGAREHNLKNISVAIPRNRLTVITGLSGSGKSSLAF
                     DTIYAEGQRRYVESLSAYARQFLGLMEKPDVDAIEGLSPAISIEQKTTGQNPRSTVGT
                     VTEIYDYLRLLWARVGIPHCPNDGTPVARQSAAQITDAVLSWPEESRIEVLAPLVRGR
                     KGEFRDMLEDVRKRGFVRVRVDGETYDLGSVPALNRRQNHDIAVIVDRLVVRGSDRSR
                     LNDSIETALKTADGIVEVVRYGGQSASRSAGQPHTSNELTGQADGPTGRPSVQSVIFS
                     ERFACPVCGLSLPELEPRQFSFNSPFGACPDCHGVGTRREVNAELVLGDPSISILEGV
                     ILPWGEPSGYLRKVVLPTLAKAFTFDLNAAWSEHSEAARRAILYGAPGQFKFQTNGGR
                     GAGEYETEWEGVLRNIERRYRESSSDSVRSTLEEFMTEQPCQTCGGKRLRPESLSVLV
                     NGTSIGDVVDLPIERAIEFFESIPLRGECSNGRGGLDPDIAGPILKEVVDRLRFLRDV
                     GLDYLTLGRAATSLSGGETQRIRLATQIGSRLVGVLYILDEPSIGLHQRDNERLLATL
                     RGLRDLGNTVIVVEHDEDTIQAADHVIDLGPRAGRFGGEVV"
BASE COUNT          383 a          693 c          637 g          379 t
ORIGIN      
        1 aacgacctca ccaccgaagc gtccggcccg aggtcccagg tcgatgacat gatccgccgc
       61 ctggatggtg tcctcatcgt gttcgacgac gatcacggtg tttcccagat ctctcaggcc
      121 gcgcagcgtg gcgaggagac gctcgttgtc gcgctggtgc agtccgatgc tgggttcgtc
      181 gaggatgtat agcacgccca cgagtctaga gccgatctgg gttgccagcc ggattcgctg
      241 ggtctcgccg ccggacagcg aggtggccgc gcgaccgagc gtgagataat ccaggcccac
      301 atcgcggaga aaacgcagcc ggtccaccac ctctttgagg atcggtccag cgatgtcggg
      361 atccagtccg ccccgaccat tgctgcattc gccccgcagc ggaatgctct cgaagaactc
      421 gatcgctcgc tcgattggaa gatcgaccac atcgccgatg ctggtgccgt tcaccaggac
      481 cgacaaactc tcgggccgga gccgcttgcc accgcaggtc tggcacggtt gctcggtcat
      541 gaattcttcc agcgtactcc gcacactgtc gctgctggac tcgcggtagc ggcgctcgat
      601 gttgcggagc accccctccc actccgtctc gtactcgccg gcacctctgc cgccgttcgt
      661 ctggaacttg aactgcccgg gtgcgccgta gagaatggca cgccgcgccg cttcgctgtg
      721 ctcgctccag gcagcgttca ggtcgaacgt gaacgccttg gcgagggtgg gaagcaccac
      781 cttccgcagg tatccgctcg gctctcccca ggggagaatc accccttcga gaatggagat
      841 gctcggatct cccagcacca gctcggcatt cacctctcgc cgagtgccca caccgtgaca
      901 atcgggacag gccccgaatg gagagttgaa ggagaactgc ctgggctcga gttcggggag
      961 ggataggccg caaaccgggc aggcgaatcg ctcagagaag atgacggact ggaccgacgg
     1021 gcggccggtc ggaccatcgg cttgtccggt gagttcgttg ctagtgtgcg gttgaccggc
     1081 ggaccgactg gccgactgac cgccgtagcg aacgacttcg acgatcccgt ccgccgtctt
     1141 cagcgccgtc tcgatcgagt cattcagcct ggagcggtcg ctcccgcgga ccaccaggcg
     1201 atcgacgatc accgcgatat catggttctg ccggcgattc aacgcgggga ccgagcccag
     1261 gtcatacgtc tcgccatcca cccgtacccg cacgaagccg cgcttacgga catcctccag
     1321 catgtcccgg aactcgccct tacggcctcg caccagcggg gcgaggacct cgattctgct
     1381 ctcctccggc cagctgagca cggcatcggt aatttgcgcc gcgctctgtc gcgctaccgg
     1441 cgtgccgtcg ttcgggcagt gcgggattcc cacccgggcc cagagcagtc tcagatagtc
     1501 gtagatctct gtaaccgtcc cgaccgtgga gcgtggattt tgtccggtgg tcttttgctc
     1561 gatcgagatg gcgggggaaa gtccctcgat ggcgtcgacg tcaggctttt ccatcagccc
     1621 gaggaactgc cgagcgtagg ccgagagtga ctcgacatac cgccgctgtc cctcggcata
     1681 aattgtgtcg aaggcgagcg atgacttccc cgaaccggag agaccggtga tgaccgtcag
     1741 gcggttacgg ggaatcgcga cggagatgtt cttgagattg tgctcgcggg cgccacgtac
     1801 gacgagagaa tcttgagcca tagccccgaa agctacccga agctcttacc gtgggtcaac
     1861 cgggctgtgg ttccaaaact atgggccgcc agcgacatct gtggcagcca acgcttcccg
     1921 tttccctcgg cgccatctac catagagtgc ccagcgattc actccaaacc agcaccgtga
     1981 tgtgagcctt gagtccacca acgcggcacg aaccccagat tgaaccggta catacgccgg
     2041 gcggccctgc caaaaccggc gacgcgtccg ctccagcccg cgaccagagc ca
//
LOCUS       DASRPQ010000238         1051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_652590, whole genome shotgun sequence.
ACCESSION   DASRPQ010000238 DASRPQ010000000
VERSION     DASRPQ010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_652590"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          197 a          339 c          325 g          190 t
ORIGIN      
        1 cggaattggt agacgcacta gtttcaggta ctagcggtgt aaaagccgtg gaggttcgag
       61 tcctctcctg ggcaccactg caataaaaat taatgacatc agtgtcttag caacctgaaa
      121 gatccgaccc aggcgcccca gctctcatca atccggcacg tcagctctcg gcagagttcc
      181 cgcacattgc tccaatcgca tccggtatgg gacaaaggag taagagcccg cgccgttcct
      241 ccttggcagc ccttccgcgg ttcggctcaa gtagccgcag gcccgcgcag ccgcggcatg
      301 cggagaagac gtcgtgagcg cgattggctg cagcatcgac gagacctcgg ccttgccgct
      361 tccggcggca tcggcgctcg aggctcttgc cctccttctt tccgggacaa tcgctcaggg
      421 gtgaaaccag gcaacggcct gatagggtcg ggtgcccctt tcctttcgct tgccgtcgcg
      481 accggtccgc ctgacccctt gcctacacag gtctgcgcgc tggcgacatg aagggggcgg
      541 tattctgcgc cgctgcgctg gtgagcttcg gggtccgggg aggaatgacc caaatgcacc
      601 tggacacaca cagccattcc gatcgtggaa tttttttggc ttcagcattc cgccagcggc
      661 aaacggcagc aacggcgcag atagagcgac gcctgcccgc aaggccgggc ctggtggctg
      721 ggctcagagc tgcaagggtt gtactcggtc catgccagcg gcctccgcct caggcaggcg
      781 accggcccag gataaaggcg cctgtggagc cgacccggtc ccgtcaatcg aagatcgccg
      841 ggagctgcta ttccgttccc ggatgagtgg gcgccggcgc caacatcgcc cgccgtgcta
      901 ggggcaaagc aaagctcgga cggagcgtca cgatggccaa attgtggagc gacatcggcc
      961 ggtgcaccga accccgcaag ccaagatggc agtacaccct cacggtttgc gctcgccgtc
     1021 gagcttttac acccgcgcct cggctgtcgg g
//
LOCUS       DASRPQ010000239         1740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4413353, whole genome shotgun sequence.
ACCESSION   DASRPQ010000239 DASRPQ010000000
VERSION     DASRPQ010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4413353"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            83..1218
                     /locus_tag="VFD73_02780"
     CDS             join(83..350,350..1218)
                     /locus_tag="VFD73_02780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612008.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZI72943.1"
                     /translation="MTRRPRRNHTPAFKAKVALAAVRGEKTLTELAQQFDIHPNQITQ
                     WKAQLLDGAAGLFGSESRSDRQGPAVDLTVLHAKIGELTLENDFLGRSARQGGFAERK
                     AMIDRSHDLPITRQAKMLNVSRGSVYYLPRAPSTADLALMRRMDELHLDFPFAGSRML
                     RDLLTAEGFQAGRRHVATLRKRMGIQAVYRKPNTSKPAPGHKIYPYLLRNLPVTRPNQ
                     VWAMDITYVPMARGFVYLAAVIDWFSRRVLSWRLSITMEAGFCVEAVEEALARHGKPE
                     IFNTDQGSQFTSTAFTGQLIDNAIAISMDGRGAGRDNVFVERLWRSVKYEEIYLRAYD
                     TVAEARNSLASYFSFYNSRRPHSSLDRQTPDQACFTPLPQIAAA"
     gene            complement(1309..>1740)
                     /locus_tag="VFD73_02785"
     CDS             complement(1309..>1740)
                     /locus_tag="VFD73_02785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72944.1"
                     /translation="PSGPVSFRDGAAKPWLAAGWLEPHPTGGALAKAVVTRLVLAVTG
                     RPEALRLTLADVAAPIGMAVPLSIRVAGLAARTVLLQPDGGPATITLDLPSAATIGGA
                     VDVEFRAEATITPKRLGWSSDDATPLSFALLSAEALPGGGR"
BASE COUNT          351 a          546 c          540 g          303 t
ORIGIN      
        1 gctggctcag gaaatctgaa caacgggata agtggagttt ctgcctgaaa gcggccagta
       61 tgcgtgccgc acaggagaaa caatgaccag acgaccgcgc cggaaccaca caccggcttt
      121 caaggcgaag gtggctttgg ccgccgttag gggcgagaag acgctgaccg agttggctca
      181 gcagttcgac attcatccca accagatcac tcagtggaag gcgcagcttc tcgacggggc
      241 agccggattg tttggctcgg agagtcgcag cgaccgtcag ggtccagcgg tggacctgac
      301 ggtgctgcat gccaagattg gagagctgac gctggagaac gattttttgg ccggagcgct
      361 cggcaaggcg ggtttgctga gcgcaaagcg atgatcgacc gctcccatga tctgccaatc
      421 acgaggcagg ccaagatgct gaacgtcagc cggggcagcg tttattacct gccaagggcg
      481 ccctcgaccg ctgatctcgc cctgatgcgc cggatggacg agttgcatct ggatttcccc
      541 ttcgcgggca gccgcatgct gcgtgatctg ctgacggctg agggcttcca ggctggccgc
      601 cgacatgtcg ccacgctgag gaagcggatg ggcatccagg ccgtttaccg caagcccaac
      661 acatcgaagc cggcgccggg acataagatc tatccgtatc tcctgcgcaa tctgccggtc
      721 acacgtccca accaggtgtg ggccatggac atcacctacg ttcctatggc acgtggtttc
      781 gtctatctcg ccgccgtcat cgactggttc agcaggcggg ttctgtcctg gcggttgtcg
      841 atcacgatgg aggccgggtt ctgtgttgag gcggtcgagg aggccctggc ccgccatggc
      901 aaaccggaga tcttcaacac cgatcagggc agccagttca ccagtaccgc attcaccggc
      961 cagctgatcg acaatgctat cgccatcagc atggacggcc ggggcgcagg gcgggacaat
     1021 gtgttcgtgg agcgactctg gcgatccgtc aaatatgaag aaatatactt gcgggcctac
     1081 gacacagtag ccgaggcgcg gaattcgctc gccagttact tcagctttta caactcccgc
     1141 agaccgcatt ccagccttga ccggcaaaca cccgatcagg cctgcttcac cccgcttccg
     1201 cagatcgcgg cagcctgaac ccggcaggcg ctccacttat ccgctgaaaa atctgttcag
     1261 acaagcggag ccacctcacc agctatctca taacgttacg atgattttct aacgtccgcc
     1321 gccgggcagg gcctccgcgc tcagcagcgc gaaggacagg ggcgttgcgt catcggaact
     1381 ccagccgagc cgtttgggcg tgattgtcgc ctcggcacgg aactcgacat cgaccgcccc
     1441 gccaatcgtc gcagcggacg gaagatcgag cgtaatcgtg gccggccctc cgtcaggctg
     1501 aagcaggacg gttcgagccg ccaggcccgc gacccggatc gacaggggaa cggccatgcc
     1561 aatgggagcg gcaacatcgg cgagagtcag gcgaagcgcc tccggtctgc ccgtcaccgc
     1621 caggaccaga cgcgtgacga ccgccttggc tagggcacct cccgtcgggt gcggttccaa
     1681 ccagccagcc gccagccagg gtttggcggc cccatcccgg aacgagaccg gaccgctggg
//
LOCUS       DASRPQ010000240         2969 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1593024, whole genome shotgun sequence.
ACCESSION   DASRPQ010000240 DASRPQ010000000
VERSION     DASRPQ010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2969
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1593024"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..967
                     /locus_tag="VFD73_02790"
     CDS             <1..967
                     /locus_tag="VFD73_02790"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HZI72945.1"
                     /translation="GRAMDGMASRLRGVVVAVVNEASQIGNSATDFSAMSEQLAASSG
                     QISTAMVKIASSADQQVRGMEKADALLLSLRHIAETNATASARMVELGDRIRELAARH
                     RTDVSSAGQTLLDIQEVVATSARQVQELSRLSEPITAFIALIRQISSQTNLLALNAAI
                     EAARAGEHGRGFAVVAEEVRRLADSSSSAAEDVAKTVEFIRKQVRDVSQTMDVGSARV
                     QGIEVVANAAAHALEDIATAVQEVHTAASEVAREAEANRRIVAQLGERTQEVSQAASE
                     HASASEQVTAAAEEQTASTQEMAASAGDLLQGATRLTALMQDFKT"
     gene            complement(974..1345)
                     /locus_tag="VFD73_02795"
     CDS             complement(974..1345)
                     /locus_tag="VFD73_02795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72946.1"
                     /translation="MVSELGGSQISTLLETLPGIANVLRSPVADALSSVIRAAARVGE
                     FNVADAEELVRYATRRGLLGMDEGDRLLAEIHAAQQKRLDKAADRERAHKAKARAKAK
                     PVKRIKPVKAVKKTVKAGRKR"
     gene            complement(1446..1862)
                     /locus_tag="VFD73_02800"
     CDS             complement(1446..1862)
                     /locus_tag="VFD73_02800"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HZI72947.1"
                     /translation="MFHSFKLLTVCLVASLSLTRSAAAQRVHQIRLEANPAKETFRFS
                     PALVTARPGDVLLFKAGPGVPHSIVFESGGLSEDAHEALNGAMSRRTGDLSSPMLTTE
                     GAVYRMVVPQLAPGIYVIYCLPHRAYDERAQIRVTR"
     gene            complement(2249..>2969)
                     /gene="lepB"
                     /locus_tag="VFD73_02805"
     CDS             complement(2249..>2969)
                     /gene="lepB"
                     /locus_tag="VFD73_02805"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: protein motif:HMM:TIGR02227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HZI72948.1"
                     /translation="TARTAAHTRSLVHWLWDWTKSIVVALVVWFLLRTFLVEAFRIPS
                     GSMENTLLIGDFLFVNKALYGAEVPIIHAHLPAVREPQRDDILVFDSVEEEGLKVVKR
                     LIGMPGDTLSMENGELFRNGKRVNEPYAIHTDPTRSEDPIQRAKMREWQLPHLVHRDP
                     NAYQPDLQEWGPIVVPPDSFFMMGDNRDSSYDGRYWGFLPRENVRGRPLVVYFSYDPS
                     SWRALPFLTAVRWNRLFTSPR"
BASE COUNT          583 a          940 c          894 g          552 t
ORIGIN      
        1 aggccgggcc atggacggca tggcctcgcg gctccgggga gtcgtcgtgg ctgtcgtcaa
       61 tgaggcaagt cagatcggta atagcgccac cgacttctct gctatgagcg agcagctcgc
      121 ggccagcagc gggcagatct ccactgcaat ggtcaagatc gcctccagtg cagaccagca
      181 ggtccgcggc atggagaagg ccgacgcatt gctcctgagc ctgcggcata tcgcggagac
      241 caacgcgact gcctcggccc gcatggtgga gttgggagat cgaatcagag agctcgccgc
      301 gcggcatcgg accgacgtgt cttccgccgg ccagacgctg ctggacattc aggaggtcgt
      361 tgcgacgtcg gcccggcagg ttcaggagct cagccgtctg tccgagccga ttaccgcgtt
      421 catcgctctc atccggcaga tctcgtcaca gacaaatctg ctggccctga acgctgccat
      481 cgaggccgcc cgcgcgggag aacacggccg aggctttgca gtcgtggcgg aagaggtccg
      541 ccgcctggcg gactccagct ccagcgccgc cgaggatgtc gccaagacgg tagagttcat
      601 tcggaagcag gtgcgcgacg tgtcccagac gatggatgtg ggctcagccc gggtgcaagg
      661 catcgaggtt gttgccaacg ctgcagccca cgccttggaa gacatcgcca cggcggtgca
      721 ggaggtccat accgcggcca gtgaagtggc gagagaagcc gaggccaatc gtcggatcgt
      781 agctcaactg ggtgagcgaa cccaggaagt aagccaggca gcaagcgagc acgcatctgc
      841 cagcgagcag gtgaccgccg ccgcggagga acagacggcg tcgactcagg agatggcggc
      901 ttcggccggg gacctgctgc agggggccac ccggcttacc gccttgatgc aggattttaa
      961 gacgtagagg accctaccgc ttccgccccg cttttaccgt cttcttcact gccttgactg
     1021 gcttgatgcg cttgaccggc ttggccttgg cccgagcctt ggccttgtgg gcccgctcgc
     1081 ggtccgctgc cttgtcgagc cgcttctgtt gagcggcatg aatctcggcc agtaagcggt
     1141 cgccttcgtc catcccaaga agaccgcgcc gggtagcata gcggaccagc tcctccgcgt
     1201 ctgccacgtt gaattccccc accctggccg cagcccggat aacgctgctc agcgcatccg
     1261 caaccggact tctgaggaca ttggcaatcc ctgggagagt ctccagcagg gtagagattt
     1321 gcgacccacc aagttccgaa accacgttcc ctcctaaccc gctctgatgt gcccgaccgg
     1381 ataccgtcca gtcagcagcg ggaattctcg cacggagggc cctgcttcgc tagtagtatc
     1441 taaagctacc tcgttactcg gatctgcgcc cgctcgtcgt aagcgcgatg tggtaggcaa
     1501 tagatgacgt aaatccctgg cgctaactgt ggtacgacca tccggtagac cgccccttcg
     1561 gttgtcagca tcggactgct caaatctccc gtgcgccggc tcatcgcgcc attgagtgcc
     1621 tcatgagcgt cctcgctcag tccgccactc tcgaacacga tgctatgagg cacacctggt
     1681 cccgccttga acagcagaac atcaccgggc cgagcggtca ctaatgccgg actgaaccgg
     1741 aacgtttcct tggcagggtt ggcttccagt cttatttgat ggactctttg agccgcggcg
     1801 ctcctggtga gcgagagcga cgcgaccaag cagaccgtca gcagtttaaa actgtggaac
     1861 atgagatgcc tcccgagaca aggtgccgaa ctttgcgcga caccgaaaaa ttccgtattt
     1921 tggacaggtg gggtcgagcc agatccgtgc caccaaggct ccactggaag ggccgactgt
     1981 gggccgtcgg ggaattaagg agtaccgcgc gcctgaggcg ctgattctga tcgcggcaga
     2041 tcgggaccag aggcctctgg tttgtccctc ttgtggttca attgccgtcc accgttttcc
     2101 agagcgttcc agcagcgaag atgcacccgg gggccgagtc accctgaact gcaccgcctg
     2161 caaccggacc gccgcctaca ttccgcgtac cctcagccgg tcatctcttc cagagtcgcc
     2221 ccggccctcg cattcctcgt aagcccactc agcgaggaga cgtaaacagc cggttccacc
     2281 gtaccgcggt cagaaacggc agtgcccgcc agctactcgg atcgtagctg aagtacacga
     2341 ccagtggccg tccccggaca ttttcccgag gaagaaagcc ccagtatctc ccgtcgtacg
     2401 agctgtcgcg gttgtctccc atcataaaga aagaatccgg cggcacgaca ataggccccc
     2461 attcctgcag atccggctga tatgcgttcg ggtcgcggtg caccaagtgc ggcaactgcc
     2521 actcgcgcat cttggcccgc tgaatcgggt cctccgaccg tgtcggatcg gtatggatcg
     2581 cgtagggctc attcacccgc ttgccattcc gaaagagctc gccgttttcc atgctgaggg
     2641 tgtcgcccgg cattccgatg agccgcttga ccaccttcaa cccctcttct tccactgaat
     2701 cgaacacgag aatgtcgtcg cgttggggct cccgaaccgc gggaaggtgg gcatggatga
     2761 tggggacctc cgccccatag agcgccttgt taacgaacag gaaatctccg atgaggagag
     2821 tgttttccat gctgcccgat ggaatacgga acgcttcgac gagaaaggtc cgcaaaagaa
     2881 accagaccac gagagctacg acgatggact tggtccaatc ccaaagccaa tgaaccagcg
     2941 atcgggtgtg tgcggcggtg cgcgcggtc
//
LOCUS       DASRPQ010000241         1004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_652778, whole genome shotgun sequence.
ACCESSION   DASRPQ010000241 DASRPQ010000000
VERSION     DASRPQ010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_652778"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..982)
                     /locus_tag="VFD73_02810"
     CDS             complement(<1..982)
                     /locus_tag="VFD73_02810"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HZI72949.1"
                     /translation="MTDQQQWGTIAGRSGCRTPNLNRLASQGMLCERSYTPSAVCCPA
                     RAMILSGAYHWHNGVYNQIHSNPSVHRDMNPDVVLYSQRLRDAGYRLGYIGKWHASYK
                     RQPLDFGYHEVAAINGCDPEILKGIDMNPDNVPRPAGRLRTVSERSMQWPGSEPFNMW
                     GYREGAEEDTQEQYLADLTIKMMSRFARGNQPWHLELHLVEPHDPYMPLKKYLDRYDP
                     RSIPVPKSFTDTFLGKPGLHRRESESWGKVTEDDVRQSRAHYYAYVEQVDAQVGRILD
                     ALERTGQAANTLVAFTTDHGDMVGAHRMWIKGWIPYEECYRVPLIIRWPGV"
BASE COUNT          167 a          320 c          305 g          212 t
ORIGIN      
        1 tcacgccggg ccagcggatg atcagcggca cgcggtagca ctcttcgtac gggatccagc
       61 ccttgatcca catgcggtgc gcgcccacca tgtctccgtg atcggtcgtg aacgccacca
      121 gcgtgttagc cgcctgcccg gtccgttcca gagcgtccag aatgcggccc acttgcgcgt
      181 ctacctgttc gacatacgcg taataatgcg cgcgactttg acggacatcg tcttccgtca
      241 ctttgcccca gctctccgat tcacggcggt gcagtccggg ctttcccaga aacgtatcgg
      301 tgaagctctt cggcaccgga atggaccggg gatcgtaacg gtccaggtac ttcttgaggg
      361 gcatgtacgg atcgtgcggc tctaccaggt gcaattccag gtgccagggc tgattgcccc
      421 tggcaaagcg gctcatcatc ttgatggtca ggtccgccag gtactgttcc tgcgtatcct
      481 cctcggcgcc ttcccgatac ccccacatat tgaacggctc ggatcctggc cactgcatgg
      541 aacgttcgga aaccgtgcgg agccggcctg ccggacgcgg tacgttgtcc gggttcatgt
      601 cgatgccctt caggatctcg ggatcgcaac cgttgattgc cgccacctcg tggtatccga
      661 agtcgagcgg ctgccgcttg tagctggcgt gccactttcc tatgtagccc aagcggtagc
      721 ccgcatcccg aagccgctgc gagtaaagca ctacgtccgg gttcatgtcg cggtgcacgg
      781 agggattcga gtggatctgg ttgtatactc cgttgtgcca gtggtacgcg ccggagagga
      841 tcatcgcccg cgccgggcag cagaccgccg aaggcgtata gctcctctcg cacaacatcc
      901 cctggctcgc cagccggttg agattcggcg tgcggcagcc cgaacggccc gcgatggtcc
      961 cccactgctg ctggtcggtc atgatgtgga ggatattggg ccgt
//
LOCUS       DASRPQ010000242         1028 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2218732, whole genome shotgun sequence.
ACCESSION   DASRPQ010000242 DASRPQ010000000
VERSION     DASRPQ010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2218732"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(59..541)
                     /locus_tag="VFD73_02815"
     CDS             complement(59..541)
                     /locus_tag="VFD73_02815"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HZI72950.1"
                     /translation="MDRPIAQFIERMGVALESDGMPRIAGRILGLLLVSEDALSLDEL
                     ASELGVSKASISTNARLLEQRGVLERISRPADRRDYYRVPPDLFTHTMAQRLARWERF
                     HTAIAAARTNLPIRSREVLERLREFEEAYAYMARTIREALAHWETSREERSARTAVLR
                     "
     gene            complement(659..>1028)
                     /locus_tag="VFD73_02820"
     CDS             complement(659..>1028)
                     /locus_tag="VFD73_02820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72951.1"
                     /translation="TLATQLEVPAHIPDRFTPLRLKELATSEQRALMLLSALRLFYGS
                     LGAFAGAALSSLLGAGLSAGPAGALAGTLELLAIAAGFIGVGGLILGCVLLVRETRIA
                     VLVVSEEAALLRDHFATRAR"
BASE COUNT          197 a          359 c          305 g          167 t
ORIGIN      
        1 ccaacgcagg cccacgctcc cgccagcacc aatccggcat acccaaaaag cttcgatgtc
       61 accgcagcac agctgtcctg gccgaccgct cctcccggct cgtctcccaa tgggccaacg
      121 cctctcggat cgtccgcgcc atgtaggcgt aggcctcctc gaactctctg agccgctcca
      181 acacttcccg gcttcgaatc ggcagattgg ttcgggccgc ggcgatggcg gtatggaacc
      241 gctcccaccg ggcaagacgc tgcgccatcg tatgagtgaa caggtcgggt gggacgcggt
      301 aataatcgcg gcggtcggcg ggccggctga tccgctccag gaccccgcgc tgctccagca
      361 gccgcgcgtt ggtgctgatg cttgccttgc tcacgcccag ttccgaggcc agctcatcga
      421 gcgaaagtgc atcttcgctc accagcaaca ggcccaggat gcgcccggcg atcctcggca
      481 tgccgtccga ttccagggca actcccattc gttcgatgaa ctgcgctatc ggtcgatcca
      541 tcggctcctc ggcttgcccg cgcgattcgc gagccccccg ccgaaagtta attcgttcaa
      601 tatcaactta acgatatcct gccgagcaga agtgacagcg agcacagatc gaatcgattc
      661 acctggctcg ggttgcgaaa tggtcccgca gcaaggcggc ttcctcactc accacgagca
      721 ctgcgattct ggtctcgcgg accaacagca cgcagccgag gatcagccca cccactccga
      781 tgaatccggc ggcgatggcg agcagctcca gcgttccagc cagggcgccg gccgggccgg
      841 ccgacagccc ggcgccgagc agcgagctca gggcagctcc ggcaaacgct ccgagggatc
      901 cgtagaacag gcggagcgcg ctgagcaaca tgagcgcacg ctgctccgaa gtggcaagct
      961 ccttcaagcg gagcggagtg aaacggtcag ggatatgggc cggcacctcc agctgagtcg
     1021 ccagtgtt
//
LOCUS       DASRPQ010000243         1021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3473304, whole genome shotgun sequence.
ACCESSION   DASRPQ010000243 DASRPQ010000000
VERSION     DASRPQ010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3473304"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            748..>1021
                     /locus_tag="VFD73_02825"
     CDS             748..>1021
                     /locus_tag="VFD73_02825"
                     /inference="COORDINATES: protein motif:HMM:NF015581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HZI72952.1"
                     /translation="MTDDRILTEADVVTKLSPQPVPETVAKLTAMISAKGMRLFAVID
                     QAAEARQAGLTLRETTLVIFGSPAAGTPVMAASPLSALDLPLKVLIW"
BASE COUNT          203 a          328 c          303 g          187 t
ORIGIN      
        1 gccggggccg agccgacggc gggcatctca gcggcgatag cgagcgcgct gccagccacc
       61 gcaatgatta accggcggct gaacactcgc ataatcgtca gtttaacggt ttggatcccg
      121 ttggcccccg gtgatcactt caagatcgca ccatgcctct gagatgcgcc ccgagcgcga
      181 tccgaacgcg cgactagggt gtattaagat cttgacagtg acaaccggaa acggctgcct
      241 tctcataaag ttctaggccg cagcaaccgc tgcataatca acaacccgag aaactatcca
      301 agatcgttga cacggctcag tgccgacttg caagacagcc tgaacacttt tgccaggacg
      361 ggtccgtcca catactggcc agcccaattg ttcaggtgtt cgcgctcgtg aacttcgaaa
      421 gatcggtgcc tgccgggacc gcatagttct gctctcccta ttgcctttga gcgggcccag
      481 atcgatgaat ccattcctgt atgcaacggc gttcgcaaat acacagcttc gactacgcca
      541 attcgatagc ttctggctgc cgcaattcca cacccctgac cgtaccgccg caatcgggga
      601 ttccactgga caggcgaccg gagggaggcc gattgttcgg ccgggccgaa cagtccctgc
      661 gtgagttgcc ccttgttccg cggccagggc catgtgagcc tggcaccgca ggcagggtca
      721 ccagtcagtg aagaagggcc acttgccatg accgacgacc ggatcctcac tgaggccgat
      781 gtggtgacga aactcagccc tcagccggtg cccgaaacgg tggcgaagct caccgccatg
      841 atcagtgcca aggggatgcg gctgttcgcg gtcatcgacc aggcggccga ggcccggcag
      901 gcggggctca ccctgcggga gaccacgctg gtcatcttcg gcagccctgc ggcgggcacg
      961 ccggtgatgg ccgcctcgcc gctgtccgcg cttgacctgc cgctcaaggt gctgatctgg
     1021 g
//
LOCUS       DASRPQ010000244         5196 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_967037, whole genome shotgun sequence.
ACCESSION   DASRPQ010000244 DASRPQ010000000
VERSION     DASRPQ010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5196
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_967037"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..908)
                     /locus_tag="VFD73_02830"
     CDS             complement(<1..908)
                     /locus_tag="VFD73_02830"
                     /inference="COORDINATES: protein motif:HMM:NF012447.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid lyase"
                     /protein_id="HZI72953.1"
                     /translation="MPSPTFILDGQSLGIEDVVRVARDPTTRVTTAPDARRALKGGRD
                     IVDQAIASGQTIYGINTGFGKLANVRIPPDQLDQLQTNLIRSHASGVGSPLPATVVRA
                     TMLLRANVLLRPTSGVRPELVDALIAMLNAGVLPVVPEQGSVGASGDLAPLSHIALAL
                     MGEGEVADGLGPPTAARTALLHAGLTPYRFAPKECLAFINGTQAQTALLALYVYDSEV
                     LWRSAVGAAAMSLEALRGTPAPLDPRIHEARPHAGQIRAAALMRALLQESAIRESHRE
                     NDPRVQDAYSLRCAPQVLGAVADAIA"
     gene            complement(962..1846)
                     /locus_tag="VFD73_02835"
     CDS             complement(962..1846)
                     /locus_tag="VFD73_02835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72954.1"
                     /translation="MRGWPASILLLSIVACSSNRTGPGNPPDVPASLSSTTLDGAIAL
                     TWSDNSYTADPANFEHYRVYSTSYDLGITQCGSSWRLEGTTVAPEFLVGALTNGISRC
                     FSVSAASRDGAESARSEVRHDTPRPDARNVVLFARQEQNAGSGFRFWKDGNGDRVVQD
                     GELGLVLSGSDPSIDFSVERDGSGAFFLTPVRPGTGVEFYSDTPVEDLTSIDVAPCLP
                     ASDPSACSAYATTPIEASPGFAYVFEMQTDDPSDPYLRYGAVRVTHVGQTFLIMDWAF
                     QTDPGNPELLTGRHRGAS"
     gene            complement(1912..>5196)
                     /gene="tatC"
                     /locus_tag="VFD73_02840"
     CDS             complement(1912..>5196)
                     /gene="tatC"
                     /locus_tag="VFD73_02840"
                     /inference="COORDINATES: protein motif:HMM:NF040057.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HZI72955.1"
                     /translation="LMVGLVLASPVILWQAWAFLAPALYQREKRALVPSLFVGLLLFL
                     TGVVLAYLFVVPQALRVLFSFQTEAIAPFITYDAYFGFVLQVTLALGLSFELPLVIII
                     LSWLGVIGPAELNRFRRYAIVLAFIAGAVLSPGTDVLSMIMMTVPLLLLYEVGFAGSL
                     IMRRRRARAEREPVAGSTIGLVILLCLIGTRVEAQVPRQQRRPPAVRPDSLRDSTRLA
                     DSTRARAGQTLDTATARRMGLPTAPTRSFATPDSVTAELLARPGYQSTRYTADTATVF
                     VQDERVLLKGKALTERRGTSLEANTITYRRSSCLLDASGDPHLFDRGQVLVGQGIRYD
                     TCVRRGVISDALTNFSQGSTVWFLRGNVSQDSSASRIYAASSEITSCDLPVPHYHFAG
                     REVKWVSSNVLVARPVVLYVRDVPILWLPFIFQDMRPGRHSGILIPQFGFNDLVRPNR
                     SYNRQITNLGYYWAPNDYIDLTARLDWYSNRYLQYGLSGQYNWINRFVDGAVAFSKQQ
                     QSGGSSSTTLRWDHRQNFDLSTSLNLDLNYASNTSVLQRNAIDPLLNTQQITSSLNFS
                     KRYGWGTLTIGGNRRQSLSDGSIQQLLPALTISPASIALGSNITWSPGLSVTNNTTSK
                     VRQGTFVQVLPTGALDSIGQLGSTRSTVLDFQTPVRIGGFNWQNSLRVQDDRNTGRTA
                     DTIRVADATTPDPADSALVIRTFPGDFSSRLDWDTGINLPVLFRGSWKLQPAVGIANT
                     TSDAFMIRNRNTNGAWVHQGKRFRFSASASPTLFAFYPGFGLASRIRHSLSPTLSWNY
                     SPAASVPEEFARALAAPGQPLQLRSDATQTMSLGLSQTFEAKAKTRPGDSTNVEARKI
                     RVLSINTSPISYDFEQAKKPGRTGWITDVVTNSFLSDLLPQFTLSLTHDLWRGAVGSD
                     TAKFAPFLSSVSASFAVSSNTLRSIGSIFGLGGKSSSPGSNQVPRSYVADAGRRNRPS
                     AFYNTGQVPFSGGRSFSANFNYTLSRTRPVPGLPAPETQQNLGFSTNFSPTPFWTLSW
                     SSQYNITDTKFESQVVRLERQLHEWRAGFNFVRNANGNFAFYFSIYLTDLPDLKFDYN
                     QTTFER"
BASE COUNT         1029 a         1562 c         1700 g          905 t
ORIGIN      
        1 aaggcgatgg catcggccac ggcaccaagc acctggggcg cgcaccggag actatacgca
       61 tcctgtacgc gaggatcgtt ctctcgatgc gactctcgga tggcgctctc ctgaagcagg
      121 gctcgcatca gcgccgctgc cctgatctgg ccggcgtgag gccgcgcctc gtggatcctg
      181 gggtccagcg gtgccggggt tcctcgaagc gcctccaggc tcatggccgc tgccccaacg
      241 gcgctccgcc agaggacctc ggagtcgtaa acgtagagcg ctagaagagc ggtctgcgcc
      301 tgagtcccat taatgaaggc aaggcattct ttcggcgcga agcggtaggg ggtcaggccg
      361 gcgtgaagca aggctgtccg ggcggctgtc ggcgggccca ggccatcggc gacctcaccc
      421 tcacccatta gtgccagggc gatgtggctc aagggagcaa ggtcgccgct ggcacccacg
      481 cttccctgct ccggcacaac cggaagtacc ccggcgttga gcattgcgat cagggcatcg
      541 accagctctg ggcgaacccc gctggtcgga cgaagcagca cgttcgccct cagcagcatg
      601 gtggcccgca ccaccgttgc cggcaacggc gaaccgacgc cggaggcatg actccggatc
      661 agattggtct gcagctggtc gagttgatcg ggcggaatcc gaacgttggc gagcttccca
      721 aaaccggtat tgatcccgta aatcgtctgc cccgatgcga tcgcctggtc aacgatgtcg
      781 cgtccaccct tgagcgcgcg ccgggcgtcc ggggccgtcg tgacccgagt ggtgggatcg
      841 cgagcgacac gaacgacgtc ctcgataccg agcgattgtc catcgagaat aaaagtcggg
      901 gagggcatcg ccccgaagtt cactctgtca gggcgacgat tcaacccccg cgtctgctaa
      961 gtcaggatgc tccgcgatgc ctgccggtca ggagctctgg atttccggga tcggtttgaa
     1021 acgcccaatc catgatgagg aaagtctgac ccacatgagt cactcgaact gctccatagc
     1081 gtagatacgg atcgctggga tcatccgtct gcatctcgaa cacataggca aagccgggag
     1141 acgcttcgat cggcgtagtg gcataggcag agcacgccga cggatccgat gccggcaaac
     1201 atggcgccac atcgatactg gtgagatcct cgaccggcgt gtcggagtaa aactcaaccc
     1261 cagttcccgg acgcaccgga gtgaggaaga aagctccgga tccatcacgc tccaccgaga
     1321 agtcgatgga tggatccgat ccggacagga ccagcccgag ttcgccatcc tgcacgaccc
     1381 gatccccgtt tccatccttc cagaatcgaa agccgctgcc ggcgttctgt tcctggcggg
     1441 caaacagaac cacgttccga gcgtccggcc gaggcgtgtc atgccggacc tccgaccggg
     1501 cgctctccgc gccgtcgcgg gacgctgcac tgactgagaa gcaacgggag atgccgttgg
     1561 tgagtgcccc caccaggaac tctggtgcga ctgtggtacc ctccagccgc cacgagcttc
     1621 cgcactgtgt gataccgagg tcgtaggagg tgctatacac ccggtagtgt tcgaagttcg
     1681 cgggatcggc tgtgtaggag ttatcagacc aggtcagtgc aatcgcacca tcgagggtgg
     1741 tgctcgagag gctcgctgga acgtcgggag gatttccggg cccggtccgg ttggacgagc
     1801 acgctacgat ggaaagcaga aggatcgacg ctggccagcc ccgcatggct cttctcctgg
     1861 gagggatgcg agggtctgtg gcagatactg tgccagaccg cggacccgag cctaccgttc
     1921 gaacgtcgtc tggttgtagt cgaacttgag gtccggcagg tcggtcaggt agatcgagaa
     1981 gtagaacgcg aagtttccgt ttgcattccg cacgaagttg aatccggccc gccactcgtg
     2041 cagctgccgc tccaggcgga cgacctgaga ttcgaacttg gtgtcggtga tgttgtattg
     2101 agacgaccag gagagcgtcc aaaagggcgt gggggagaag ttggtgctga accccaaatt
     2161 ctgttgcgtt tccggggcgg gaagaccagg aaccgggcga gtccgggaaa gggtgtagtt
     2221 gaagttagcc gaaaagcttc gcccacccga gaacggcacc tgcccggtgt tatagaaggc
     2281 actcggacga ttgcgtcgac cggcatcggc gacgtatgaa cgaggcacct ggttgctgcc
     2341 gggcgagctg gacttccctc cgagtccgaa gatcgagccg atggaacgga gcgtgttgct
     2401 ggaaacagcg aagctcgcgc tgacgctact caggaaggga gcgaatttgg cggtgtcgct
     2461 tcccacggct ccgcgccaca gatcgtgcgt caggctcagc gtaaactggg ggagcagatc
     2521 gctgagaaac gagttggtga ccacatccgt aatccagccg gtccggcccg gcttcttggc
     2581 ctgctcgaaa tcgtagctga tcgggctggt gttgatgctc aggactctga tcttccgcgc
     2641 ctcgacattg gtggaatcgc cggggcgggt cttggctttg gcctcgaagg tttgcgagag
     2701 accgagactc atcgtttggg tggcgtcgct ccggagctgg agcggctgcc ctggggcagc
     2761 cagtgcccgg gcaaattcct ccggcacact tgcggcaggg gaatagttcc agctcagcgt
     2821 cggcgagagg ctgtgccgaa ttcgactggc cagcccgaag ccgggataga aggcaaagag
     2881 ggttggcgat gcggacgcgg agaagcgaaa ccgctttccc tgatggaccc aggcaccatt
     2941 ggtgttccga ttccgaatca tgaaggcatc gctggtcgta ttggcgatcc ccaccgcggg
     3001 ctgcagcttc cacgatcccc ggaacagcac cggcaggttg atgccggtgt cccaatcaag
     3061 ccgggacgag aagtcacccg gaaaggtccg aatcaccagg gcggagtcgg caggatcggg
     3121 cgtggtggca tcggccaccc ggatcgtatc cgccgtcctg ccggtgtttc ggtcgtcctg
     3181 gacccggagt gagttctgcc agttgaatcc accgattcgg accggcgtct gaaagtccaa
     3241 cacggtggac cgcgtgctcc ccaactggcc aatgctgtcc agtgcaccgg tgggaagcac
     3301 ctgaacgaag gtcccctggc gcactttcga ggtggtgttg ttggtgacgc tgagcccggg
     3361 cgaccaggtg atgttcgagc ccagggcaat cgacgccggc gagatcgtga gtgctggaag
     3421 cagctgctgg atgctaccat ccgacaagct ctgccgccga ttgccgccga tcgtcaacgt
     3481 tccccagccg taccgcttgg agaagttcag cgagctcgtg atctgctgcg tgttgagcaa
     3541 tgggtcaatg gcattccgct ggaggaccga cgtgttgctg gcatagttga gatcgagatt
     3601 cagactggtc gagaggtcga aattctgccg gtgatcccag cgaagggtgg tggaggatga
     3661 gcctccactc tgctgttgct tgctgaacgc cacggcccca tcgacgaatc ggttgatcca
     3721 gttgtactgg ccgctcagac catactggag atagcgattg gagtaccagt cgagccgtgc
     3781 cgtcaaatcg atgtagtcgt tgggcgccca gtaatagccc aggttggtga tctgccgatt
     3841 gtacgaacgg ttgggccgga ccagatcgtt gaagccgaac tgcgggatca gaatgccgga
     3901 gtgccggccg gggcgcatgt cctggaagat gaacggcagc cagagaatgg gcacgtcacg
     3961 cacgtagagc accactggcc gggccaccag cacgttgctc gacacccatt tcacttcccg
     4021 gccggcaaag tgatagtgag gcaccggaag gtcgcagctg gtgatttcac tgctggcggc
     4081 gtagatccgg ctcgcgctcg agtcctgcga tacgttcccc cgcaggaacc acaccgtcga
     4141 gccctgagaa aagttggtca aggcatcact gatcactcca cggcgcacac aggtgtcgta
     4201 tcggatgccc tgccccacca gcacctgccc ccggtcgaac agatggggat cgccggaagc
     4261 atcgagcaga caactcgatc gtcggtacgt aatggtgttc gcctccagcg acgttcctcg
     4321 acgctcggtc aacgccttgc ccttgagcag gactcgttcg tcctgcacga agacggtcgc
     4381 ggtgtcggcg gtgtatcggg tactctgata cccaggccgc gccaggagtt ctgcggtaac
     4441 cgaatcggga gtggcaaagc ttcgggtcgg cgccgtcggc aatcccatcc ggcgtgccgt
     4501 cgccgtgtcc agtgtctggc cggcccgggc ccgggtcgaa tcggccaggc gggtgctgtc
     4561 gcgaagcgaa tccggtctga ccgccggcgg ccggcgctgc tgccgcggca cctgggcttc
     4621 aacccgggtg ccgatcagac acagcagaat gaccaggccg atcgtgcttc ccgccacggg
     4681 ctcgcgctca gctcgggctc ggcggcgccg catgatcagc gacccggcga atccaacctc
     4741 atacagcaag agcagcggca ccgtcatcat gatcatcgac agcacatcgg tgcccggcga
     4801 cagcacggca ccggcaatga acgccagcac gatggcgtag cggcggaatc ggttgagctc
     4861 cgcgggaccg ataacgccga gccaggacag gatgatgatg acgagcggca gctcgaagga
     4921 gagccccagt gccagcgtca cctggagcac gaagccgaag taggcgtcgt aggtgataaa
     4981 gggggcgatc gcctcggtct gaaaactgaa gaggactcgg agcgcctgcg gcaccacgaa
     5041 cagataggcc agcacgacgc cggtgagaaa cagcagcagc ccgacaaaga gtgagggcac
     5101 cagcgcccgc ttttcccgct gatagagggc cggcgccaga aacgcccagg cttgccacag
     5161 gatgaccggt gacgccagca ccaggcccac catcag
//
LOCUS       DASRPQ010000245         1021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4100573, whole genome shotgun sequence.
ACCESSION   DASRPQ010000245 DASRPQ010000000
VERSION     DASRPQ010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4100573"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..345)
                     /locus_tag="VFD73_02845"
     CDS             complement(<1..345)
                     /locus_tag="VFD73_02845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI72956.1"
                     /translation="MREMSVTEQRYKAVLAVIAEGRTVTQVARDWDVARQTVHVWLER
                     YEADGLEGLTNHSHRPAHCPHQMSAAVEAQLLEMRRAKPYWGARRLALELWRKGVEPA
                     PSKSAVYRSLVRA"
     gene            553..>1021
                     /locus_tag="VFD73_02850"
     CDS             553..>1021
                     /locus_tag="VFD73_02850"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI72957.1"
                     /translation="MQLARFLVEAVVVGKQSPNQLVREHPISRSWFYELLARYRRDGP
                     AALEPKSHRPAASPHQVDQAVVDAILELRAQLSAAGLDAGPLTILHHLGSRFDKTPSR
                     VTIWRILKRQGLITPEPHKRPKASFVRFEAQLPNELWQTDATEWQLVDSSKVEI"
BASE COUNT          189 a          359 c          292 g          181 t
ORIGIN      
        1 agccctcacc aaggagcggt agaccgctga cttggaaggt gccggctcga cccctttacg
       61 ccacagctcc agtgctaggc gtcgagctcc ccagtaaggt ttcgcccgtc gcatctcgag
      121 cagctgggct tccacagccg ccgacatctg atgtgggcaa tgggccggcc gatgtgaatg
      181 gttggtgagg ccttcgagtc catccgcctc gtagcgctcg agccacacgt gaaccgtctg
      241 cctggccacg tcccagtctc gagccacctg cgtcaccgtg cgaccctcag cgattacggc
      301 caggactgcc ttgtaccttt gctccgtcac gctcatctcc ctcatgcgcg ggagtgtcag
      361 gtatcaaccg ggacacctgt caggcatcag ccgaaacgct gacaggcatc ctccgggacg
      421 cttttgtcgt gcttcagccg aatcagcaca caggacaaaa gtgcccccgg aggtgtgaga
      481 gttcagtagt taccggaccg gctgggcata gcatgtctca ggtgataccg gaccgccact
      541 ggaggtggcg gcatgcagct ggcgaggttc ctggtcgagg cggtcgtcgt aggcaagcag
      601 agccctaatc aactcgtacg cgagcacccg atctcgcgca gctggttcta cgaactcctg
      661 gctcgctacc gccgcgacgg acccgctgcc ctggagccca agtctcaccg gccagcggcc
      721 agtccgcatc aggtcgacca agctgtggtc gatgccatcc tcgagctccg cgcccagctc
      781 tcagcggccg gactcgacgc cggtccgctg accatcctcc atcacctcgg gagccgcttc
      841 gacaaaaccc cgtcgcgagt caccatctgg cgcatcctca aacgccaggg cctgatcacg
      901 cctgagccgc acaagcggcc taaggcctcc ttcgtccgct tcgaggctca gctgcccaac
      961 gagctctggc agaccgacgc caccgaatgg caacttgtcg actccagcaa ggtcgagatc
     1021 c
//
LOCUS       DASRPQ010000246         2276 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_653453, whole genome shotgun sequence.
ACCESSION   DASRPQ010000246 DASRPQ010000000
VERSION     DASRPQ010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_653453"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..292
                     /locus_tag="VFD73_02855"
     CDS             <1..292
                     /locus_tag="VFD73_02855"
                     /inference="COORDINATES: protein motif:HMM:NF014047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAM domain-containing protein"
                     /protein_id="HZI72958.1"
                     /translation="NHIAHPVSADRLRRLIEKVRLNVRRKNIARVGETHEVLVERPAK
                     RGGLMLGRTRTNHLVLLDLPPGSAGEYHTVQLTGTTGSTFIGSVVLPALAIL"
     gene            289..579
                     /locus_tag="VFD73_02860"
     CDS             289..579
                     /locus_tag="VFD73_02860"
                     /inference="COORDINATES: protein motif:HMM:NF022179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="late competence development ComFB family
                     protein"
                     /protein_id="HZI72959.1"
                     /translation="MIKNLVEEHVIAAYDTLRLHFPAFCGCELCRDDVLTFALNRIPP
                     RYVSRREGSVVTEVSLEKEQSRAAIEVVVMEALRKISVAPRCGRPGGVAPPR"
     gene            593..>2276
                     /locus_tag="VFD73_02865"
     CDS             593..>2276
                     /locus_tag="VFD73_02865"
                     /inference="COORDINATES: protein motif:HMM:NF015714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HZI72960.1"
                     /translation="MRPRPQILLTLAYGAGLATGLLHLLGPIGIAAVALASLTLRRHP
                     LLGLLCAAAALGRISAEVAWARESTSCAARFHPGPMRLVVRLLEPVDSAGARTLVRPM
                     NSGCGGVVMARWPRGRRLPAGMTATLTGQWIPRLGVAQRPSGLLLVQNVGRLGGTPAM
                     SDRIRTSLSRASGALYGTRAPMVDALVLGRRDGFDRDLQDRFAQSGLVHLLSISGFHV
                     GVITAWIFLLCRLVRVARPRALLTAAGASVAYVGFLGWPAPAARAAALAVLVSLSRVR
                     QRRVETTALLSATCLCVLLLDPWSLLDLGGWLSVTALWGATTFSRWTDRVLGSSVWWR
                     TLGSSVGATLATAPITAGVLGTVALVGIGLNFAAIPLAALAIPGVFASLLLYPIWPWL
                     AGALAGGAGLGLHLLELLATAGAAIPYGHTTMVAQPRSAVIWLALLLAGLWVIGRQNT
                     LQEAARRCSWCTAVVIWLGFFRGWFPSDEGSGFALHFLDVGQGDGAVLRTPKGRWILI
                     DAGPVNEAGDAGGRVVAPFLVRHGARGLALAFVSHAHADHLGGVATVLRRFRP"
BASE COUNT          308 a          758 c          749 g          461 t
ORIGIN      
        1 gaaccatatc gcgcacccgg tttccgccga cagacttcgc cgactcatcg agaaggtccg
       61 cctgaatgtg cgtcgcaaaa acatcgcccg agtcggtgag acgcacgagg tcctggttga
      121 gcgacccgcc aagcggggtg gactcatgct cggccgtacc cgcaccaacc acctcgttct
      181 gctggacctg ccgcctggca gcgcaggcga gtaccacact gtgcagctca cgggaacgac
      241 tgggtccacg ttcatcggct ccgtcgtgct tccggctctg gcgatcctgt gatcaagaac
      301 ttggtggaag agcacgtcat cgcggcctac gacacactcc ggctgcattt tcccgcgttc
      361 tgtggctgcg agctgtgccg cgacgacgtc ctgacctttg cgctgaaccg gattcctccg
      421 cgctatgtgt cccggaggga aggttccgtg gtcaccgaag tgagtctgga aaaggagcag
      481 agtcgcgcag cgatcgaggt cgtggtcatg gaggccctgc gcaagatttc ggtggcgccg
      541 cgctgcggca ggcccggagg agtagcgcca ccgagatagc cggcgagacg aggtgagacc
      601 ccgtccgcag attctgctta ccctcgcata cggggccggt ctcgcaaccg gccttttgca
      661 tttactggga cccattggca tagccgcggt ggcgctcgcc tccctgacgc tcaggcgcca
      721 cccgctgctg ggtcttctct gtgctgcggc ggcgctcggc agaatcagtg cagaggtcgc
      781 gtgggcccgc gaatccacca gctgcgcggc tcggtttcac cccggtccga tgcgtctcgt
      841 agtccggctg ctggagccgg tcgactcggc cggtgcccgc acgctcgtgc gaccaatgaa
      901 tagcggctgc gggggagtag tcatggcccg ttggcctcgc ggtcgccggc tgccagccgg
      961 gatgaccgcc actctcaccg gtcaatggat cccgcggctc ggagtggcgc agcgcccatc
     1021 gggcctgttg ctggtccaga acgtcggtcg actcggcggc acgccggcca tgagtgaccg
     1081 cattcgcacc tcactctccc gggccagcgg tgccttgtac ggcactcggg caccgatggt
     1141 cgacgcactc gttctgggac gtcgagacgg gttcgatcga gacctgcagg atcgatttgc
     1201 tcaatcgggg ctggttcatc tgctctcgat ctccggcttc cacgtcggcg tgattacagc
     1261 ttggatcttt ctgctgtgcc gtttagtgag ggtggctcgg ccgcgtgccc tccttacagc
     1321 agcaggtgcg agcgtggcct acgtggggtt tctgggctgg ccggcgcccg cagcccgggc
     1381 cgcggctctg gccgttctgg tgagtctcag ccgtgtgcgg cagcggcggg tcgagaccac
     1441 agcgctcctc tccgccacgt gtctctgtgt tctcctcctg gatccatggt cgctactcga
     1501 tcttggtggt tggctttcgg tgacggcgct ctggggtgcc accaccttct cccgctggac
     1561 cgaccgggtt ctgggctcct cggtgtggtg gcgcaccctg ggctcctcgg tcggcgccac
     1621 actggcgacc gcgccgatca ccgccggcgt tctcggcacg gtggctctgg tcggcatcgg
     1681 gctcaacttt gccgccatac cactcgccgc cctagccata cccggtgtat ttgccagtct
     1741 gctgctgtat cccatctggc cttggctcgc cggcgcgctc gccggcggag ccggcctcgg
     1801 actacacctg ttggagctgc ttgcgaccgc gggcgccgcg atcccttatg ggcacacgac
     1861 catggttgcc cagccccggt ctgcggtcat atggctggct cttcttctgg ctggtctgtg
     1921 ggtgatcgga cgccaaaaca ccctgcaaga ggcggcgcga cggtgcagct ggtgcaccgc
     1981 cgtagttatc tggctgggat tctttcgcgg atggtttccg tctgacgagg ggtctgggtt
     2041 cgcgttacat tttctcgacg tcggccaggg cgatggagcc gtcctccgca cccccaaagg
     2101 acgctggatc ctgattgacg ccggaccggt caacgaggct ggtgacgctg ggggccgagt
     2161 agtcgccccc ttcctggtgc gccacggcgc tcgagggctg gcgcttgcct tcgtgtccca
     2221 tgcccacgca gaccatctcg gcggcgttgc cacagtgctg cgccggttcc gtccgg
//
LOCUS       DASRPQ010000247         1294 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3170043, whole genome shotgun sequence.
ACCESSION   DASRPQ010000247 DASRPQ010000000
VERSION     DASRPQ010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1294
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3170043"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..581)
                     /locus_tag="VFD73_02870"
     CDS             complement(<1..581)
                     /locus_tag="VFD73_02870"
                     /inference="COORDINATES: protein motif:HMM:NF014862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
                     /protein_id="HZI72961.1"
                     /translation="MSDEAMNNFTPRAQQVLALARKEADRFNHNFVGTEHLLLGLIKL
                     GQGVAVNVLQKMGLDLETVRMEVEKQVGTGPDQKMIGNIPYTPRVKKVLALAAKEART
                     LTHTYVGTEHILLGLLREGDGVAARVLKNLDVDIEQTRQEILKELDPNFNAQEEPAVP
                     ESPEKAAPEKKGEVKTPALKAFGRDLTEIARKG"
     gene            complement(761..1252)
                     /locus_tag="VFD73_02875"
     CDS             complement(761..1252)
                     /locus_tag="VFD73_02875"
                     /inference="COORDINATES: protein motif:HMM:TIGR02603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HZI72962.1"
                     /translation="MRENPANNQQLIAKWKAQLAPATLAKSDLSQGRAVFNLACAVCH
                     TLYGEGGKIGPDLSGAGRDNLDYLLENIIDPSAMVPADFKVTVVSLKDGRVFNGVVMS
                     QNARTLTLKIMNGTVTLEKGEIEETRPSELSLMPEGLLEAWPLDQIRDLIGYLQHPTQ
                     VEP"
BASE COUNT          215 a          421 c          377 g          281 t
ORIGIN      
        1 tcgcccttgc gcgcgatctc ggtcaggtcg cggccgaacg ccttgagggc gggcgtcttg
       61 acctcgccct tcttctcggg cgccgccttc tcggggctct cgggcacggc cggctcttcc
      121 tgggcgttaa agttgggatc cagctccttc aggatctcct ggcgggtctg ctcgatgtcg
      181 acgtcgagat tcttcagcac gcgggccgcc acgccatcgc cctcgcgcaa gagccccagg
      241 agaatgtgtt cggtgccgac gtaggtgtgg gtcagcgtgc gcgcttcctt ggcggccaga
      301 gcgaggacct tcttcacccg gggcgtgtaa gggatgttcc caatcatctt ctgatcgggt
      361 ccggtgccga cctgcttctc gacctccatc cggacggtct ccagatcgag ccccatcttc
      421 tggagcacgt tgacggccac gccttggccc agcttgatca ggccgagcag cagatgctcg
      481 gtcccgacga aattgtggtt gaaccgatcg gcctcttttc gcgccagcgc cagaacctgc
      541 tgggcgcgag gcgtgaagtt attcatggct tcgtcgctca tacgcttcta atagatgcac
      601 ctagagtttg ctttgtccag cgttccgatt tgaaccccgg accggacgcc cacgagcgcc
      661 cgactccgtt gccaccaccc ttatcgtatg gatgggccag gaggttagcg ggaatctcat
      721 cccagctgca cccccgggga gagcccccgg gcgaaccgca tcagggctcc acctgggtcg
      781 gatgctgcaa ataaccaatc aaatcgcgga tttggtccag cggccacgcc tcgagcaggc
      841 cctccggcat cagggacaac tccgacgggc gcgtctcttc aatctcgcct ttttccagcg
      901 tcaccgtgcc gttcatgatc ttgagcgtca gggtccgggc attctggctc atcaccaccc
      961 cgttgaacac ccgcccatcc ttgagggaga ccacagtcac tttgaagtcc gccggcacca
     1021 tggcgctcgg gtcgatgatg ttctccagca ggtaatccag gttatcgcgg ccagccccgc
     1081 tgagatcagg gccgattttc ccgccttcgc cgtaaagtgt gtggcagacc gcgcacgcta
     1141 aattaaaaac agcccgtcct tgactcagat ctgacttggc aagggtggcg ggcgcgagtt
     1201 gagccttcca cttggcgatc agttgctggt tattggccgg attttcgcgc attgctcccc
     1261 agacgtcagc caacttctgt gttagcggtg aatc
//
LOCUS       DASRPQ010000248         1099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3791577, whole genome shotgun sequence.
ACCESSION   DASRPQ010000248 DASRPQ010000000
VERSION     DASRPQ010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3791577"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(800..976)
                     /locus_tag="VFD73_02880"
     CDS             complement(800..976)
                     /locus_tag="VFD73_02880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72963.1"
                     /translation="MATYRMVYGDDEQVVRETFENIDGVEREDGWVVLFRGPEAILRV
                     QEIHVQSLELLTDP"
BASE COUNT          202 a          385 c          329 g          183 t
ORIGIN      
        1 ccgggacgtt cccgtggtgc aggaaggtac gaaggtcctc cactacctgt gtgatcggcc
       61 ggggcgtcga cgccggatcg ctcttgccgt acccggcccg gtcataggag cagaccatgg
      121 cccgatcgag cagcgcctcg ccgatcggct gcagctgggt acggtcattc cctgccccga
      181 gtcaaggacg atcgttggcg cgccggggac cggcttccca ttgcactcgc ccgcgatcgt
      241 tcgtccctga accgtcacgg tgatctctcg acgtccgccg ctggaaccga tcccgccagc
      301 agcgctagct gacgccgtgc cctccacaga cttgggcttg ctcgccgacg tttgaccgcc
      361 agggttgccc gatcccgcgc aacccgccag cgcaatgagc aaacacgcga ctcccagcgg
      421 cgcggcgcat atgtttcgca tggcccccct tgccacgcgc ggcacactga tcaggccgct
      481 cgcaaggccc acgctaggag ggccggggcc atagggcaag ggtgaatcct ttacgtttcc
      541 atggtgtgac cactatcaga gtttgaccca agctgttacg cctcgggtgc caaggagcga
      601 tcaggcaacc ggcagccggg catcaagccc gcggtgaaat acatgacgct cgccaccgag
      661 acgatcaagc aaggatgcgg tcgctgggag ccaccggcgc gaacgacttc ctgcgcccag
      721 cgaacgagcc cggacaggca gattgtgatc aggccaggtc gtggaccgat ccgggcgacg
      781 ctgaacggct gacaggtatc tacggatccg tgagcagttc cagcgactgc acgtggatct
      841 cctgcacacg caagatcgcc tccggcccac ggaagagcac gacccagccg tcctctcgct
      901 ccaccccgtc gatgttctcg aacgtctccc gcacgacctg ctcatcgtct ccgtagacca
      961 tccggtacgt agccatcggc aatgctcctg aaatctccga aacgctcgcc cgcggggggg
     1021 ccggtgatct atccctgccc attcgccggg agcagcaaca cgtggaaaat tgctcatcca
     1081 ttggctcgcg cgcgccgat
//
LOCUS       DASRPQ010000249         1405 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_653881, whole genome shotgun sequence.
ACCESSION   DASRPQ010000249 DASRPQ010000000
VERSION     DASRPQ010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1405
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_653881"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..762)
                     /locus_tag="VFD73_02885"
     CDS             complement(<1..762)
                     /locus_tag="VFD73_02885"
                     /inference="COORDINATES: protein motif:HMM:NF005560.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZI72964.1"
                     /translation="MSGNQAPHVVVIGAGFAGLSAAWELVQRGLRVTVCEADDEVGGL
                     AGSFPVGETRLEKFYHHWFTSDTHVLDLVRELGREDQVLHRATRTGMYFAHQFFRLST
                     PADVLRFTPLSLAGRLRLGLLALRARRVREWDELEDLTAEEWLIRLGGREVYDVVWRP
                     LLKGKFGPYADEISAVWFWNKLKLRGGSRGRGGEEVLAYYKGGFAALASQLANEICAR
                     GGMIRLESPVTALRVEDGRTTGVKIDHAPIAADAVL"
     gene            complement(759..>1405)
                     /locus_tag="VFD73_02890"
     CDS             complement(759..>1405)
                     /locus_tag="VFD73_02890"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HZI72965.1"
                     /translation="MLDLLVLLAILFAGAIGTSGVFPHGFIVLAGIAGTVAVVLLLIL
                     TIFPGEITTLLQRLLIRIFSGRTWLPTLSQAVAQLTGSVALLRSPRRAIRLIGLSILA
                     WILEGAVFASVVWSLGIAVPWTAPWLSLAAATLATLLPSSPGYVGTFDYFAVLGLSAY
                     GARAADATAFALLTHLMLWIPITVAGLLALGLSRPRSNPATVGDSLSSQSGAVA"
BASE COUNT          305 a          466 c          428 g          206 t
ORIGIN      
        1 gagtaccgca tcagccgcaa tcggagcatg atcgatcttc actccggtgg tcctgccatc
       61 ttcgacccgg agcgccgtta ccggcgattc cagccggatc attccgcccc gggcgcagat
      121 ctcgttggcc agctggcttg ccagcgcagc aaacccaccc ttgtaatagg ccagaacctc
      181 ctcgcctccg cgtccccggc ttccaccgcg cagcttgagc ttgttccaga accagaccgc
      241 cgagatctcg tccgcgtatg gaccgaactt tcctttcagc agtgggcgcc agacgacgtc
      301 gtacacttca cgtcccccga gacggatcag ccattcttcg gcagtcagat cctccagctc
      361 atcccactcc cggactcggc gagcgcggag agcaaggaga ccgagacgca accgacccgc
      421 cagtgacagc ggtgtgaacc ggagcacatc cgccggcgta ctgaggcgga agaattgatg
      481 tgcgaaatac atccccgtcc gagtggctcg atggagcacc tgatcttctc ggccaagctc
      541 gcggacgaga tcgagaacgt gagtgtcgct ggtgaaccag tgatgataga acttttccag
      601 gcgggtctca cccacgggga agctgcctgc cagccccccc acttcatcat cggcctcaca
      661 gacggtgact cgcagtcccc gctgtaccag ttcccatgcg gccgaaagcc cggcgaagcc
      721 ggcaccgatc accacgacat gcggtgcttg gttcccgctc acgcgaccgc ccccgactgg
      781 gatgagagcg aatcacccac agtcgcgggg ttgctccgcg ggcgggacag cccaagcgca
      841 agcagaccag cgaccgtgat agggatccac agcatcaggt gcgtgagcag cgcgaaggcg
      901 gtggcatcgg ccgcccgtgc gccgtaggcg ctgagtccca gaacggcgaa atagtcgaag
      961 gtgcccacgt acccgggcga gctggggagc agagtcgcca gggtcgcagc ggccagcgaa
     1021 agccacggcg ccgtccatgg cacggcgatg cccagggacc agacgacaga ggcaaacacc
     1081 gctccttcca ggatccacgc caggatactc agcccaatga ggcggatggc ccggcggggt
     1141 gatcgaagca gcgccaccga tccagtcagc tgcgcgactg cctggctgag cgtgggtagc
     1201 cacgttcgtc cggaaaagat ccggatcagc aggcgctgga gcagggtggt gatttcaccg
     1261 gggaaaatgg taaggatcag gagcagaaca accgccacgg ttccagcaat gccggccaga
     1321 acgatgaacc catgagggaa cacgccggac gtgccaatgg cgccggcaaa aagaattgcc
     1381 agcaacacca agagatccag catcc
//
LOCUS       DASRPQ010000250         1512 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1914535, whole genome shotgun sequence.
ACCESSION   DASRPQ010000250 DASRPQ010000000
VERSION     DASRPQ010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1914535"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            471..1280
                     /locus_tag="VFD73_02895"
     CDS             471..1280
                     /locus_tag="VFD73_02895"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZI72966.1"
                     /translation="MLQRAPTAESYDHYYGSGLYDARYPRPNPPTYRSALRLARTSSR
                     ILDFGAGSGRYTMPFLQATDAFVCAYDISADACRALETQAAAAGVGSHRLLVTDDLDA
                     ARAAGPYDLAVALFGVLSHIEGKENRIDILSSIRSVLSRDGLLLLTVPHALRRFPFHM
                     SSDRPGSESGASSARAQARRYFPSARPVIYRHDVENEARTFSYYLFSRRELIAELSAA
                     GFALESLESDSILPERRLVLRPTLAPVDDLLCRLLPSWAGYGLRAICRARP"
     gene            complement(1333..>1512)
                     /locus_tag="VFD73_02900"
     CDS             complement(1333..>1512)
                     /locus_tag="VFD73_02900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72967.1"
                     /translation="RPIGTARDETGHLDGHERLAVSAQQHYEALPDYRPPGLVTYLSD
                     LASLHLEPVPEKAWS"
BASE COUNT          268 a          521 c          445 g          278 t
ORIGIN      
        1 cagccacgaa cccggccccc tcggaccaga acccgcagcc cccctgctgg tcgatacctc
       61 ccgcgaacag ctgccagccg cagccgacct gctccgcacg ccataacccg cccacccgga
      121 ctaaaagccg acagccagga caagtccggc accacgaagc aggcctccag gaggttcccg
      181 ccatgcggcg gcgctcaggc acatggccga atagcggaat gcgtgtgcat acccctctca
      241 gcatccgggc caacctcgtt atcgaagatc gttagtcctg aacggcacag catttcagcg
      301 ccgcgccagt gttgttcaag cgccggatga catggttcgg ctgggagttg cggcgggcga
      361 ggatatccgg gcaggcgccc ggtgccccgt cggcgaacat acggcagcat gccgcttgcc
      421 gatcctgaga ggaagagatc tgtgctgaaa tcctccggtg ggtagccgcc atgcttcaaa
      481 gggcacctac cgcggaaagc tacgaccact actatggcag cggcctgtac gatgcgcgtt
      541 atccccgtcc gaacccgcct acctaccggt ctgcgctgcg actcgccagg acgtcgtcac
      601 gcatactcga tttcggcgcg ggaagcgggc gctacactat gccattcctc caggccacag
      661 atgcttttgt atgcgcttat gacatatcag ctgatgcctg ccgggcgctg gaaacacagg
      721 ccgcagcggc cggcgtcggc agccaccgcc tgctggtcac cgacgacctc gatgccgccc
      781 gggcagcagg tccgtatgac ctagctgtag cgctcttcgg cgtgctttcc cacatcgaag
      841 gaaaagaaaa ccggatcgac atcctcagtt cgatacgttc ggtgctcagc cgggacggcc
      901 tgcttcttct caccgttcct cacgcgcttc gccgctttcc ctttcatatg tcatcagatc
      961 gtcccggcag cgaaagcggg gcgtcttccg cccgggcgca ggctcgccgt tacttcccct
     1021 cggcacgacc ggttatctat cgccatgacg tcgagaacga ggcgaggacg ttttcttatt
     1081 acctgttctc acgtcgcgag cttatcgctg agctttccgc agccggcttt gctctggaat
     1141 cccttgaatc agacagtatc ttgccggagc gaaggctggt tctcaggccg acgctggcgc
     1201 ctgtcgacga cctgctgtgc cgtcttcttc catcatgggc cggttacgga ctgcgagcta
     1261 tctgccgagc caggccctag cgatcgagcg cccctgagca ccgcgacgaa ccgccgagga
     1321 cgggccgggg cttcaggacc aggccttctc tggcaccggc tcaaggtgca agctggctag
     1381 atccgacagg tacgtgacaa gtcccggcgg ccggtaatcg gggagcgcct cgtagtgctg
     1441 ctgggcgctc acggccagcc tctcatgccc gtcgaggtgg ccggtctcgt cccgggccgt
     1501 cccgatcggc cg
//
LOCUS       DASRPQ010000251         1433 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_26871, whole genome shotgun sequence.
ACCESSION   DASRPQ010000251 DASRPQ010000000
VERSION     DASRPQ010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1433
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26871"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..969)
                     /locus_tag="VFD73_02905"
     CDS             complement(<1..969)
                     /locus_tag="VFD73_02905"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HZI72968.1"
                     /translation="MESTLAPYSRWDPVLPGQKGGPVRDQFIWSKPDPGPLPADTEDI
                     AFAPLTRLARWIETRQLTSERLTNIYLDRLRQFDPKLRCVITLTADLAMAQARQADQE
                     IKAGRYRGPLHGVPWGGKDLLDTAGIPTTYGAEPYRNRVPKEDAAVVKRLREAGAVLV
                     AKLSLGALALNDVWFGGQTVNPWLLEEGASGSSAGPGAATAAGLVGFSIGSETGGSIV
                     SPSMRCGITGLRPTYGRVPRTGAMTLCWSLDKLGPMTRSVEDAMLVLHAISGPDAGDV
                     ASVPARLEFDATAPVKGLRVGYLESWMKEAPATDVDRATLDATRKLG"
BASE COUNT          248 a          487 c          411 g          287 t
ORIGIN      
        1 cccgagcttg cgggtcgcgt cgagcgtggc acgatcgacg tcggtcgcgg gcgcctcctt
       61 catccacgat tcgaggtagc caacacgcag ccccttcacg ggcgcggtgg catcgaactc
      121 caggcgtgct ggcacgctcg ccacgtctcc cgcgtcggga ccactgatcg cgtggaggac
      181 cagcatcgca tcttcgacgg agcgcgtcat cggaccgagc ttgtccagcg accagcagag
      241 cgtcatcgcg cctgtccgcg gcacacgccc ataggtcgga cgcagccccg tgataccgca
      301 acgcatgctc gggctcacga tgctgccacc ggtctcgctg ccgatcgaga atcccaccag
      361 ccccgcagct gtcgctgcgc ccggcccagc gctcgaccct gacgctcctt cttcgagaag
      421 ccatggattg acggtctgac cgccgaacca gacatcattg agcgccagag cgcccaggct
      481 gagtttcgcc accagtacag cgcctgcttc acgcagccgc ttcaccaccg ccgcatcttc
      541 cttgggaaca cggttgcgat acggctcagc tccgtaggtg gtaggaatgc ccgccgtatc
      601 aagaagatcc ttgcctcccc acggaacacc gtgaagcggc cctcgatacc tccctgcctt
      661 gatctcctgg tctgcctgcc tcgcctgcgc cattgccaag tcggccgtaa gtgtgatgac
      721 gcagcgcagt ttgggatcga actgccgcag acggtcaaga tagatgttcg tgagccgttc
      781 agacgtcaac tgccgggtct caatccagcg tgcgagccgt gttagcggag caaaagcgat
      841 gtcctctgtg tcggcgggca acgggccagg atcaggcttg ctccagataa attgatcgcg
      901 aaccggaccg cctttctgtc ccggcaagac agggtcccag cgcgagtagg gcgccagagt
      961 cgattccaac tcaactttgt ggggtcccgt tcggcgctca tacagaggcg ccatcgccat
     1021 gcgccagttc cccgccgctt ccgtacgctc agcggcagtc agttccaccc gtacgagctt
     1081 ttccgcttcg gcaaatgtcc ctgtcgagac ctccgggcca acagccgggg ctgtcccaaa
     1141 tgcgggagga gctcccgggg gcggctcggc aggctttggt gtctccgttg gtttctgtgc
     1201 gtctaccgtt gatgcgaccg ccgctcccaa tactccgagt gaagcttctg ccaggaactg
     1261 cctgcgcgat ttcgccattc ttcaggattc ctccggggca agattataga cggggcacca
     1321 cgctttttcg gttttctaaa cgggtctgat cgaacttgca gttcgattat ccggcctctt
     1381 cgctgatctc caccagtttt tgccccacca ccttggtttc accggcggta agc
//
LOCUS       DASRPQ010000252         1091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3170342, whole genome shotgun sequence.
ACCESSION   DASRPQ010000252 DASRPQ010000000
VERSION     DASRPQ010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3170342"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1086)
                     /locus_tag="VFD73_02910"
     CDS             complement(<1..1086)
                     /locus_tag="VFD73_02910"
                     /inference="COORDINATES: protein motif:HMM:NF024189.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YXWGXW repeat-containing protein"
                     /protein_id="HZI72969.1"
                     /translation="MLSGAAEANARAQGYYGPPPPYGPPPPGYYAPPPRYGSAPRGYY
                     GPPHAGYAARPPRAVVAASISVAPPPLPVYEQPLCSGPGYIWTPGYWAYASGGYYWVP
                     GTWVLPPAVALVWTPGYWGYEGQQYIWHAGYWGPHVGYYGGINYGFGYSGSGYEGGYW
                     NNGMFFYNTAVTRVDTAVITNTYNKQAVSTVTVNNVSFNGPGGMAAQPTAQEVAWSRE
                     RRTQPTSLQVKHQRTASTNRALFAAVNHGTPTIAATSKPGVFKGTAIVGPKPVVATTN
                     ASVGAGSTVSNPKAPSHGQNGTVPAASEAGSGSGKQAPAGPNGTAAPVANGGAALDQH
                     TPGRPLGVDAAAVNGGAAPAQPDAPAAV"
BASE COUNT          203 a          326 c          354 g          208 t
ORIGIN      
        1 aacagcagca ggagcgtccg gttgagcggg ggctgctcct ccgttcaccg cggcagcgtc
       61 gacccctagt gggcgaccgg gagtatgttg atcgagcgct gctcctccat tggccacagg
      121 agcagcggtg ccgttaggac cagcaggagc ctgtttaccg ctgcctgatc ctgcttcgct
      181 ggcagctgga acggtcccgt tttggccatg cgagggagct ttgggattag acactgttga
      241 cccggcaccc actgaggcgt tggtcgttgc aacgaccggt tttggcccga cgatcgcggt
      301 ccccttaaac actccaggct tggaggttgc cgctattgtc ggagtgccat ggttcaccgc
      361 agcaaaaagg gcgcgatttg tgctcgcggt gcgctgatgc ttgacttgca gggacgtcgg
      421 ctgagtgcgt ctttcccgag accaagccac ttcttgagcc gttggttggg ctgccatacc
      481 gccgggccca ttgaagctga cattgttcac cgtgacggtg ctgacggctt gtttgttgta
      541 agtgttggtg atgacggccg tgtccaccct tgtaacggcg gtgttgtaga agaacattcc
      601 gttattccag tagccgcctt catagccgga gccggaataa ccgaagccat agttgatacc
      661 cccgtagtag ccgacgtgcg gtccccaata tcccgcatgc caaatgtact gctggccctc
      721 atacccccag tagcctggag tccagactag ggcgacagcg gggggcagta cccaggtgcc
      781 aggcacccaa tagtatcccc ccgaagcgta agcccagtag cccggcgtcc atatgtaacc
      841 cggtccggaa cagagcggct gttcgtaaac tgggagggga ggcggagcga cacttatgga
      901 cgccgcgaca accgcgcgag gtggccgggc ggcgtaccca gcatggggcg gcccgtagta
      961 accacgaggc gccgagccgt acctgggcgg cggagcgtag taaccgggag gcggcgggcc
     1021 gtaggggggt ggcggcccat aataaccctg agcccgcgca ttagcctcgg cagcaccact
     1081 caacaccccg a
//
LOCUS       DASRPQ010000253         1002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4101164, whole genome shotgun sequence.
ACCESSION   DASRPQ010000253 DASRPQ010000000
VERSION     DASRPQ010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4101164"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            200..>1002
                     /locus_tag="VFD73_02915"
     CDS             200..>1002
                     /locus_tag="VFD73_02915"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HZI72970.1"
                     /translation="MPGFFPMWVVITHFLNLFFMLLLFRSGFEVLSAFPKLYWHDDSP
                     PGREWLRLSKTAYAADSRKPWSSLDEEESWSPLVALPGKKNLGLGRHWHFMSIQFWIL
                     TGVVYVVLTFATGYWRYLVPQHWSLLPDSIRAIGTYLQFKTPAKIPGQPFEPAQKLSY
                     FLVVFVLAPAQIATGAAMSPSVLARFPWYGRVFGGKQGARSLHFLGMCAFAMFLVVHV
                     AMVIVHGVPKEFAAIVLGDPDGNRRLALGVGLSGLFAIALIHVIITWFSL"
BASE COUNT          139 a          342 c          296 g          225 t
ORIGIN      
        1 gagccctcat ccgagtcctc aagcgcgcgg gtgccgacct cggtgcccgc atttttggcc
       61 ctgttcacaa cgctcattct gccatagttc gttgcgcttc cgcaaccttt gcgcttatgc
      121 tgacaccgtt gcggacgtag ccgaccgaac ggctaccggc ccgccggccc gcgccagtgg
      181 agctaaggag cagatctcgg tgcctggttt cttcccgatg tgggtggtca tcacccactt
      241 cctcaacctc ttcttcatgc tcttgctgtt ccgttccgga ttcgaggtgc tctcggcctt
      301 cccgaagctg tactggcatg acgacagtcc cccgggccgg gagtggctcc ggctgtccaa
      361 gaccgcctat gcggccgact cgcgtaagcc gtggtcctcg ttggatgagg aggaatcatg
      421 gtcaccgctg gtcgcactgc ccggtaagaa gaacctgggc ctgggccggc actggcactt
      481 catgagcatc cagttctgga tcctcaccgg cgtcgtctac gtcgtgttga cgttcgccac
      541 cggatactgg cgctacctgg tgccgcagca ctggtcgctg ctgcccgact cgatacgcgc
      601 tatcggcacc tacctgcagt tcaagacccc agccaagatc cccggccagc cgttcgagcc
      661 cgcccagaag ctgagctact tcctcgtggt cttcgtcctc gccccggcgc agatcgcgac
      721 cggggcggcg atgtcgccgt cggtactggc ccgctttccc tggtacggac gagtctttgg
      781 cggcaagcag ggggcccgca gcctccactt cctggggatg tgcgccttcg cgatgttcct
      841 ggtggtgcac gtcgcgatgg tgatcgtcca cggtgttccc aaggagttcg ccgccattgt
      901 cttgggcgat cccgacggca accggcgcct ggctttgggt gtcggcctgt ctggcctgtt
      961 cgccattgcc ctcattcacg tgatcatcac ctggttctcg ct
//
LOCUS       DASRPQ010000254         1329 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1280652, whole genome shotgun sequence.
ACCESSION   DASRPQ010000254 DASRPQ010000000
VERSION     DASRPQ010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1329
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1280652"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(524..599)
                     /locus_tag="VFD73_02920"
     tRNA            complement(524..599)
                     /locus_tag="VFD73_02920"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(564..566),aa:Val,seq:tac)
     gene            complement(590..853)
                     /locus_tag="VFD73_02925"
     CDS             complement(590..853)
                     /locus_tag="VFD73_02925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72971.1"
                     /translation="MSQKPNVTRPKSLKAKAAVPEVDLGFRWGVLNTALLGLGVAVLA
                     GGYMSLSKGSLTLAPVLLVTGYCVLIPAALLVRGTGNSSTEGE"
     gene            896..1030
                     /locus_tag="VFD73_02930"
     CDS             896..1030
                     /locus_tag="VFD73_02930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72972.1"
                     /translation="MNACDLAGTFSRSRSPALGRAFRGPGHGDLSEDRGGAAASDGAH
                     "
BASE COUNT          240 a          438 c          393 g          258 t
ORIGIN      
        1 tgaggatcag gcacgccgac cttgctgccg acgagcttga tgcagctggg taccgtcgag
       61 ttgccggggc tgggcacgcc cgccatcgcg accgaggcga tgagaagacc ggccgcagta
      121 aggagcgtgg ccttgcgaac caaaccagtc attgttgcac ctccctaaag ggtgaaaacc
      181 tgttgcatgt gttccaggca aggctcagtt gcgcgcaatc aggtctggct tcgagccacc
      241 tcctttcgaa ctcttcatat cttcaatatg agcttagagt tcgagtgcct tggcgagctt
      301 atctcctgcg ctaacaaggc cttccaagac agaacaaagt ctaggcggcg tgtttgcgcg
      361 gtgtcaagga cgttcttggc gtccgcatgc catggaactc gttttctcgc ctcactttgg
      421 gagtcagtac ccgcgttcac cgatcggaca gcgagagccc gtactgctgg cgaaccgcga
      481 ccccttctcc ctccccttct ccgtctggat cctttgtcac cgctggtggg cgaaacaggg
      541 ctcgaacctg tgaccccttg cttgtaaggc aagtgctcta ccagctgagc tattcgccct
      601 cggtcgagct gtttccggta ccgcgcacca gcaaagcggc cgggatcagg acgcagtacc
      661 cggtgaccaa cagcaccgga gcaagcgtca aggagccctt cgagaggctc atgtagccac
      721 ccgccaggac cgccacgccg agacccagga gcgcggtgtt gagcactccc cagcggaagc
      781 cgaggtccac ctcgggcacc gccgccttgg ccttcaaact cttgggacgc gtgacgttag
      841 gcttctggct catcttcccg acccctattc ttgctccccg cggaagcgtc gagctatgaa
      901 cgcctgcgac ctcgccggga cgttctcccg ttcgagatcg ccggcgctgg gccgggcctt
      961 tcgaggcccg gggcacggcg atctcagcga agatcgcggt ggtgccgccg cctccgatgg
     1021 ggcgcactga ttcgtaccca tacaggaagc cgcggttccg gaattgttcc cacttcgttg
     1081 tgcgccgaag attgttggac gccccggcag agctccttct tgcctggcag ccattccatt
     1141 tttgaacgag ttacagcgtc aaggaatccc ccccacaatc ttcgacgcac tctgtggggg
     1201 attgaggttg ccggacttga ggccctccag gtcgagggcg acccagcgga acccgagctc
     1261 cttgagaccc cggacgagcc cctcccgcac ccccggcgcc accaggcgcg gcaggtcagg
     1321 gagcgggac
//
LOCUS       DASRPQ010000255         4272 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_27337, whole genome shotgun sequence.
ACCESSION   DASRPQ010000255 DASRPQ010000000
VERSION     DASRPQ010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4272
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27337"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..570
                     /locus_tag="VFD73_02935"
     CDS             136..570
                     /locus_tag="VFD73_02935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72973.1"
                     /translation="MHRLLRVLLAISLTIPGLLRAQDESLRGAAERARRAWSAHDPVG
                     LVGGSPRVQVQLPGADPSAALGPGQAAALLGDFISSAQEVETTVRGAREVTPGSGYVE
                     LQRRYRVAGTQDIRVQVLLLSYRLTKAGWRLVEVRVVDNGSH"
     gene            654..770
                     /gene="rpmJ"
                     /locus_tag="VFD73_02940"
     CDS             654..770
                     /gene="rpmJ"
                     /locus_tag="VFD73_02940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020322760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HZI72974.1"
                     /translation="MKVRSSVKPICEHCKVIKRQGVVRVICKRNPKHKQRQG"
     gene            773..1153
                     /gene="rpsM"
                     /locus_tag="VFD73_02945"
     CDS             773..1153
                     /gene="rpsM"
                     /locus_tag="VFD73_02945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HZI72975.1"
                     /translation="MARIAGVDLPREKRVEIALTYIFGIGRPTSSRILGETGVNPDTR
                     VRDLSDAEVARLRQIIERSVKVEGALRTEVAMNIKRLMDIGSYRGIRHRRGLPVRGQR
                     THTNARTKKGPRRAIAGKKKVTKK"
     gene            1155..1556
                     /gene="rpsK"
                     /locus_tag="VFD73_02950"
     CDS             1155..1556
                     /gene="rpsK"
                     /locus_tag="VFD73_02950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010646231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HZI72976.1"
                     /translation="MTAPTPAKAATAKRSKKVVDTEGIAHISATFNNLLITITDMRGN
                     ALAWGSAGKAGFKGSKKSTPFAATVAAENCGREAMNLGLRRVHVRVQGPGSGRESAIQ
                     ALASVGLRVVSIRDVTPIPHNGCRPPKKRRV"
     gene            1663..2721
                     /locus_tag="VFD73_02955"
     CDS             1663..2721
                     /locus_tag="VFD73_02955"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:NF003513.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HZI72977.1"
                     /translation="MTIDLSGLVRPHLVEMTKRDDNPNAAEFRLQPLERGFGYTLGNS
                     LRRLLLSSLRGSAVWGFRLDGVVHEHQTVQGVLEDVHQIVQRLKALTLVLAENVDDAV
                     LHIRREGAGPVYARDIQEHGSVAIKNPDHLLFTLQDNRDVSMELYVNKGRGYVEAEMH
                     PADRSLPIDLVRVDAIYNPVRRANFTVAETRVGQRTDYDRLTVSVETNGTISPEDAIA
                     YAAALAQVHFQYFVDFGKVPTMRDTGSATGGAGGTNLRQRLARPIDDFGLSVRSLNSL
                     KNSNIRTLKDLVEFSEDDLLKVKNVGEKALSEIAELLQREGLNFGMAFEETDGELRVT
                     RPGVPPVVQPTTAGGDGL"
     gene            2721..3077
                     /gene="rplQ"
                     /locus_tag="VFD73_02960"
     CDS             2721..3077
                     /gene="rplQ"
                     /locus_tag="VFD73_02960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HZI72978.1"
                     /translation="MRHRAKGRQLSRTSSHKRAMLNNMATSLFEHGRVITTEAKAKEL
                     RPFAEKLITLARRGDLHARRLAERKIKDRETLTRLFAEIGPRFAARPGGYTRILRLGH
                     RPGDGADVARIELLAE"
     gene            complement(3163..3354)
                     /gene="rpmB"
                     /locus_tag="VFD73_02965"
     CDS             complement(3163..3354)
                     /gene="rpmB"
                     /locus_tag="VFD73_02965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014398134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HZI72979.1"
                     /translation="MARVCAVCAKGPVTGNNVSHANNRTKRRWYPNLQTVRVLVDGAP
                     KRIRVCTQCLKSNRIKKAS"
     gene            3443..>4272
                     /locus_tag="VFD73_02970"
     CDS             3443..>4272
                     /locus_tag="VFD73_02970"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HZI72980.1"
                     /translation="MPKALITGVTGQDGSYLAELLLSKGYEVVGVVRRTSHHSYERIE
                     HLLNRIEVVAADLLDQHSLTVVLQETRPDEVYNLAAQSYVPTSWTQPVLTGEFTALGV
                     TRILEAVRLVHPSAKFYQASSSEMFGRVTETPQTETTSFYPRSPYGVAKVYGHWITVN
                     YRESYDLYAVSGILFNHESPRRGIEFVTRKVTDGVARIKLGLASEIRLGNLEARRDWG
                     YAGDYVDAMWRMLQQPSPQDYVVGTGQTHSVRELVETAFAHVGLDWRKYVVSDPKYMR
                     P"
BASE COUNT          831 a         1293 c         1368 g          780 t
ORIGIN      
        1 cctcggcgac cagtcccggg tggcgactgc aacggacgcg gctcgaaatg gtgccactca
       61 tctcgtggtg gggcggccca ttcttcaagc gtccgatccc gccgcagcgc tggagcggct
      121 gatgaaggag gctcagtgca ccgattgttg agagtgctgc tcgcgatctc gcttacgatt
      181 cccggcctgt tgagggcaca ggacgagagc ctccgaggcg cggcggaacg ggctcgccgt
      241 gcctggtcgg ctcatgatcc agtcgggctg gtcggtggga gtccccgagt gcaggtgcag
      301 ttgcctgggg cggacccatc ggccgcactc ggcccgggcc aggccgcggc gctgttggga
      361 gacttcatct cgtccgccca ggaagtcgag accaccgtgc ggggagcacg agaggtgaca
      421 ccggggagcg gctatgtcga gctgcagcgg cggtatcgag tcgccggcac tcaagacatc
      481 cgggtacagg ttctcttgct cagctaccgc ctgaccaaag cgggctggcg attggtcgag
      541 gtcagggtcg tggataacgg gtcgcattaa ttctgttggc ttcttcgact tgcgtgacat
      601 tctgatcact tctatattgc ccagctagcc tcaaacctgg ccgggagaag cacgtgaagg
      661 ttcgttccag cgttaagccg atctgcgagc actgcaaggt catcaagcgg cagggcgtcg
      721 ttcgcgtcat ctgcaagcgc aatcccaagc acaaacagcg gcaaggctga tcatggcacg
      781 tattgccggc gtcgatcttc cccgggagaa gcgggtcgag atcgccctga cctacatttt
      841 tggtattggt cgtcccacca gctcgcggat cctcggggaa accggggtca acccggatac
      901 ccgggtgcgc gatctctcgg atgcggaggt tgcccggctc cgtcagatca tcgagcgctc
      961 ggtcaaagtg gaaggcgcgc ttcgcaccga agtggcgatg aatatcaagc ggctgatgga
     1021 tatcgggagc taccggggaa tccggcatcg ccggggtctt ccggtacggg ggcagcggac
     1081 ccacacgaac gcacggacca agaaaggtcc ccggcgtgcc atcgccggta agaagaaagt
     1141 gacgaagaag taagatgact gctcccactc cggccaaagc ggcgacggcc aagcgatcga
     1201 agaaggtcgt ggacaccgag ggtatcgccc atatttcggc gacgttcaac aacctgctga
     1261 tcacgattac ggacatgcgc ggcaacgcgc tggcgtgggg atcggcaggt aaggcggggt
     1321 tcaagggctc gaagaagtcc actccctttg ccgctaccgt tgccgccgag aactgcggac
     1381 gggaagcaat gaatttggga ttgcgccggg tacatgtgcg ggtgcagggc ccgggcagcg
     1441 gacgagagtc tgccattcag gcgctcgcat cggtgggcct ccgggtggtc tccatccgcg
     1501 acgtcacacc gattccgcac aacggctgcc gcccgcctaa gaagcggcgc gtgtgagtga
     1561 gtccagagtc gatcgtcacg agtcgcattg tgtatccaca ggcggactcg cgactctcga
     1621 ctcacgactc gagactttta tcggagtatt gacgaagtga ccatgaccat cgatctcagc
     1681 gggctggttc gtccccacct ggttgaaatg accaagcggg acgacaaccc gaatgctgcc
     1741 gagttccgtc tccagccatt ggagcggggc ttcgggtaca ccctgggcaa ctccttgcgt
     1801 cgcctgctgc tctcctctct gcgcggtagc gcagtgtggg ggttccggct ggatggcgtg
     1861 gtgcatgagc accaaaccgt acagggggtg ctggaagacg ttcaccagat cgtccagcgg
     1921 ctcaaggcgc tgaccctcgt actcgccgag aatgtggacg acgcagtgct ccatatccgg
     1981 cgggagggcg ccgggcccgt ctatgcgcgg gatatccagg agcacggatc ggtggccatt
     2041 aagaatcccg atcatctgct ctttaccctg caggacaatc gtgacgtgag catggagctc
     2101 tacgtcaaca agggtcgcgg ctacgtggaa gccgaaatgc atccggccga ccgctcgctg
     2161 ccgatcgatc tggtccgggt ggacgctatc tacaatccgg ttcgccgggc caacttcacc
     2221 gtggccgaaa cccgagtcgg tcagcgcaca gactacgacc ggcttaccgt ttcggtggag
     2281 acgaatggca ccatcagccc ggaagacgcc atcgcgtacg cggctgcgct ggcccaggtg
     2341 catttccagt acttcgtgga tttcggcaag gtgccgacca tgcgggacac ggggtcggcc
     2401 accggcgggg cgggaggcac caatctgcgt cagcggctcg ctcggccaat cgacgacttc
     2461 ggtctctcgg tacggtcgct gaactctctc aagaactcca atatccggac tctcaaggat
     2521 ctggtggagt tttcggagga cgatctcctc aaggtcaaga acgtgggaga aaaggcgctc
     2581 agcgaaatcg cggagctgct ccagcgcgag ggcctcaact tcgggatggc gttcgaggag
     2641 accgatggtg agctccgcgt cactcggccc ggtgttcccc cggtagtgca accgacgacc
     2701 gccggaggag acgggctgta atgcgacacc gcgccaaagg ccgccagctc tcccgtacat
     2761 cgagtcacaa gcgcgccatg ctgaataaca tggcgaccag tctcttcgag cacgggcgag
     2821 tgatcaccac cgaggccaag gccaaggagc tgcggccgtt tgccgagaag ctcattacct
     2881 tggcccgtcg gggcgatctt cacgcgcggc gcctggcaga gcggaagatc aaggatcggg
     2941 agacgttgac tcggctcttc gccgagatcg gcccccgttt cgctgcgcgg ccgggaggct
     3001 acacccggat tctcagactc ggccatcgtc ccggcgacgg agcggatgta gcccggatcg
     3061 agctccttgc ggaatagaga gtttgccgcc agtcagaaac aaaaagaggg gaccttcggg
     3121 tccccttttt tacagcagtg gcgagaacat tgccgccgga cgttagctgg ctttcttgat
     3181 ccgattactc ttgaggcatt gagtacacac gcggatccgc ttcggcgccc cgtccaccag
     3241 gacgcgcacc gtctgcagat tcggatacca gcgccgcttg gtgcggttgt ttgcgtggct
     3301 gacgttattg ccggtgaccg gcccctttgc gcacaccgcg catacccgtg ccatacgctc
     3361 cactccaaaa taagtcttcg aagacaagcc agtaaacgta acgagggcag ctggatgaca
     3421 caactccgcg gggtctgccg ggatgcctaa agcgctcatc accggtgtca ccggccagga
     3481 tggttcctat ctggccgagc tactcctgtc caagggatac gaggtagtag gcgttgtccg
     3541 ccgtaccagc catcacagct acgaaagaat cgagcacctg ctcaatcgaa tcgaggtggt
     3601 ggccgccgac ctgctggacc agcactcgct caccgtggtg ctgcaggaga ccaggccgga
     3661 cgaagtctac aacttggcgg cgcagtctta cgtgcccacc tcctggaccc agccggtgct
     3721 caccggcgag ttcactgcgc tcggcgtgac ccggatcctc gaggcagttc ggctggtgca
     3781 cccttccgcc aaattctacc aggcgagctc gtccgaaatg ttcggccggg tgaccgaaac
     3841 gccgcagacc gagacgacct cgttctatcc gcgatcgccc tacggagtag ccaaggtgta
     3901 cgggcactgg atcaccgtga actatcggga atcatacgat ctgtatgcgg tgagcggcat
     3961 tctgttcaac cacgaatccc cgcgtcgcgg catcgaattc gtcacccgca aggtcactga
     4021 cggcgtggcg cggataaagt tggggctcgc gtcggagatc cggctcggga acctggaagc
     4081 tcgccgagac tggggctacg caggtgacta cgtggacgcc atgtggcgca tgctgcaaca
     4141 gccttcaccc caggattatg tcgtcggcac cgggcagacc cacagcgttc gggagctggt
     4201 cgagaccgcc tttgcgcacg tagggctgga ttggcggaag tatgtggtca gcgatcccaa
     4261 gtacatgcgt cc
//
LOCUS       DASRPQ010000256         1623 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1915072, whole genome shotgun sequence.
ACCESSION   DASRPQ010000256 DASRPQ010000000
VERSION     DASRPQ010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1915072"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1381
                     /locus_tag="VFD73_02975"
     CDS             <1..1381
                     /locus_tag="VFD73_02975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HZI72981.1"
                     /translation="AANPLSTFSIDVDAASYSNVRRFLSQGTLPPPDAVRLEELVNYF
                     SYTYPDQTGSRPFAVSADVGPCAWEPEHRLVRIGLQARKMATRDLPPSNLVFLIDVSG
                     SMQSEDKLPLVKQAFRALVQELRPEDRVAIVVYAGAAGLVLPSTSGADKSTILGAIDR
                     LEAGGSTAGGAGLRLAYDVARENHLSEGNNRVILATDGDFNVGESSDAEMIRLVETRR
                     EEGTFLTVLGFGTGNLKDTKMEQMADKGNGHYAYIDSFREAHKVFVREFGGTLFTVAK
                     DVKIQVEFNPARVQSYRLLGYEDRILAKEDFADDRKDAGEIGAGHAVTALYEIVPTGA
                     SPVAIGDDSLTYQQVTLRPSAGRSPELLTIRLRYKEPTGSKSRFLSVPVVDRGERGSD
                     DFRFASAVAAFAMVLRNSEYKGAADYSLVLALARQARGEDEEGYRQEFISMVERARAL
                     SMGGDTALE"
     gene            1506..1592
                     /locus_tag="VFD73_02980"
     tRNA            1506..1592
                     /locus_tag="VFD73_02980"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1540..1542,aa:Ser,seq:cga)
BASE COUNT          308 a          466 c          528 g          321 t
ORIGIN      
        1 agcggccaat ccgctctcca ccttctccat cgacgtggat gccgcatcct acagcaacgt
       61 gcgtcggttt ctgagtcagg gcacgctgcc tccgccggat gccgttcggc tggaggagct
      121 ggtcaactac ttctcatata cctaccccga tcagacgggc agccgcccat tcgcggtgag
      181 cgccgacgtc ggaccgtgcg cctgggaacc ggagcatcgc ctggttcgca ttggactcca
      241 agcaaggaag atggccaccc gagacctgcc gcccagcaat ctggtcttcc tgatcgacgt
      301 ctccggctcc atgcaatcgg aggacaagct tccgctggtc aagcaggcct ttcgcgcact
      361 ggtccaggag cttcggccgg aggacagggt cgccatcgtg gtgtatgccg gggccgccgg
      421 actggttctc ccctcgacct ccggcgcaga caagtcgacg atcctcggcg cgatcgaccg
      481 gctcgaggca ggcggctcta ccgctggtgg cgcaggactg cggctggcct acgatgtcgc
      541 cagagagaat cacctgtcgg agggcaacaa ccgcgtgatc ctcgcgacgg acggagattt
      601 caatgttggt gagagctccg acgcggagat gatccgcctg gtcgagacga gacgggaaga
      661 gggaacgttc ctgacggttc tcggcttcgg caccggcaac ctcaaggata cgaagatgga
      721 gcaaatggcc gacaagggaa atggtcatta tgcgtacatc gacagctttc gcgaggcaca
      781 caaagtcttc gtgcgggagt tcggcggtac cctgtttact gttgcgaagg acgtgaagat
      841 ccaggtcgag ttcaatccgg cacgggtgca gtcgtatcgg ttgctgggct acgaggatcg
      901 gatccttgcc aaggaggact tcgccgacga tcgcaaggat gccggtgaga taggggccgg
      961 gcacgcggtg acagcgttat atgagatcgt gcccaccggc gcttctccgg ttgcgatcgg
     1021 tgacgacagc ctcacctacc agcaggtcac ccttcggccc agcgccggcc gcagtccgga
     1081 gctgttgacg atacggcttc gctacaagga gccaactgga agcaaaagtc gtttcctgag
     1141 cgtaccagtc gtggatcgcg gtgagagagg ctcggacgat ttccggtttg cttcggccgt
     1201 ggcggcgttt gccatggtgc tccggaactc ggagtacaag ggggccgccg actacagtct
     1261 ggtgctggca ttggctcgcc aggcgcgggg tgaggacgag gaagggtatc ggcaggagtt
     1321 catcagcatg gtggagcggg cgcgcgctct gagtatgggc ggagatacgg cgctcgaata
     1381 gcggtgagcg gtcagaggta agcgataagc ggtaagcggt gagcggggtt gctcagcgat
     1441 gcattcgccg agtacccgct cacgcttttt ctttccccct cacgttttat ctttccccca
     1501 gttctggaca ggtgtccgag tggctgaagg agccggtctc gaaaaccggt atacccgcaa
     1561 gggtatcgtg ggttcgaatc ccaccctgtc cgtttgtttc gttaaatatc ttttgtactc
     1621 aca
//
LOCUS       DASRPQ010000257         1004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3171053, whole genome shotgun sequence.
ACCESSION   DASRPQ010000257 DASRPQ010000000
VERSION     DASRPQ010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3171053"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="VFD73_02985"
     CDS             complement(<1..383)
                     /locus_tag="VFD73_02985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004512 - inositol-3-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006021 - inositol biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-3-phosphate synthase"
                     /protein_id="HZI72982.1"
                     /translation="MAERSGRQIAPAEGKLGVMCVGLGAVATTFMAGVENVRRGTARP
                     IGSVTQMGTIRLGKRTEKRAPLIRDFVPLAALDDLVFGAWDPVPDDAYAAAIHAGVLD
                     RHEHIEPVASFLKGIKPMPAAFDQN"
     gene            complement(376..>1004)
                     /locus_tag="VFD73_02990"
     CDS             complement(376..>1004)
                     /locus_tag="VFD73_02990"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HZI72983.1"
                     /translation="GLVLVSALAYATGHVRTGGLLLLLSGVADTLDGQVARSGAMVTR
                     FGAFYDSTLDRVGDGATFIGIGAYLLTAPDVAYRTPAIILCMVAILGSLLVSYARARA
                     EGLGLDCKVGIAQRAERILGVGIASVVFGAGPHALLLEAIVALLAVASLITVVQRFAY
                     VYRHAGRVDEALREEERRYVEAVQQQPEEPRRVKRPALDPLAKGHSSG"
BASE COUNT          194 a          325 c          319 g          166 t
ORIGIN      
        1 tagttctgat cgaaggccgc cggcatcggt ttgatgccct tgagaaagga agcgacgggc
       61 tcgatgtgct cgtggcggtc cagaactccg gcatggatag cggcggcgta ggcatcgtcg
      121 ggcaccgggt cccaggcacc aaacacgaga tcgtcgagcg ccgcgagggg aacgaagtcc
      181 cggatcagag gtgcccgctt ctcggtccgc ttccccagac ggatggtccc catctgggtg
      241 accgagccga tgggacgagc ggttcctcgg cggacgtttt cgactccggc catgaaagtc
      301 gtcgcgaccg cgcccagccc tacacacata actccgagct tgccttctgc cggggcgatt
      361 tgtcggcccg atcgttcagc cactgctgtg tcctttcgcg agtgggtcga gcgcagggcg
      421 tttgacccgc ctcggttcct ccggctgctg ctgcaccgcc tcgacgtacc tgcgctcctc
      481 ttctcggagc gcctcgtcga ctcggccagc gtgtcgatac acgtaggcaa accgctggac
      541 cacggtaata agagaggcca ccgcgaggag cgctacaata gcttcgagga gcagcgcgtg
      601 aggtcctgca ccaaagacca ctgaggcaat gcccacgccc aggatccgct ctgcccgctg
      661 agcgatgccc accttgcagt cgagacccag accctcagcc cgtgcccggg cgtaggacac
      721 caggagagag cctaaaatcg caaccatgca gagaatgatg gcgggagttc ggtaggcgac
      781 gtcgggagcg gtgaggagat aggcacctat gcctatgaac gtcgctccat caccgacacg
      841 gtccagtgtc gagtcataga acgcgccgaa gcgggttacc atggctccgc tgcgggccac
      901 ctggccatcg agggtgtcgg ccaccccact caggagcagc aggagtcccc cggttcggac
      961 atgtccggtt gcatacgcca gagcagagac cagcaccaga ccgg
//
LOCUS       DASRPQ010000258         1160 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3475127, whole genome shotgun sequence.
ACCESSION   DASRPQ010000258 DASRPQ010000000
VERSION     DASRPQ010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3475127"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            103..>1160
                     /locus_tag="VFD73_02995"
     CDS             103..>1160
                     /locus_tag="VFD73_02995"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZI72984.1"
                     /translation="MMVGMEKAEGLGPHFLGDGRQDVEVTSTLPISMTTFVGRDQELD
                     EIRSLFRGGKRLVTLVGIGGIGKTRLALELGFSADDLGWANVYFVELAPLTSADLVDD
                     AVLESVGGGSSRSPLQAVVEHLREATGLLVLDCCEHVLDAARRVAEVVLPRCPSVAIL
                     ATSRSPLDIEGELVWQVPPLSMQKRGDASDTGASDAARLFADRASHVQARFELSEDVA
                     GAVEAIVRKVDGIPLAIELAAARVRVLSAEEIADGLDDHLQLLRGGHRSDPRHQTIRA
                     SLDWSQELLTDRERQLFARLSVFSVGFDLEAAATVCAGRAIAPGQVLDEIQGLVDKSL
                     LAVERKARTTRFRMLDFVR"
BASE COUNT          171 a          349 c          415 g          225 t
ORIGIN      
        1 cgccaagctg caggcctgtg atcgtttctc ggcggtgcgg cgcgcgcgag agctgcggct
       61 gctggcgcct gcgggcggtg gcaggttcac ctgatcctgg ccatgatggt tggcatggaa
      121 aaggcagagg gtctcggacc tcatttcctt ggcgacggcc gacaggacgt ggaggtcacc
      181 agcacccttc cgatctccat gaccaccttc gtcggccgag accaagagct ggacgagatc
      241 cggtcgctgt tccggggggg aaagcggctg gtcaccctgg ttggcatcgg ggggatcggt
      301 aagacccgtt tggccctgga gctgggcttc agcgcagacg acctgggctg ggcgaacgtc
      361 tatttcgttg agcttgctcc gctgaccagc gccgacctgg tcgacgacgc cgtgctcgaa
      421 tcggtgggcg gcgggtctag ccgctctccg ctgcaagcgg tggtggagca cctgcgcgaa
      481 gctaccggac tgcttgtttt ggactgttgc gagcatgtcc tggatgcggc ccggcgtgtg
      541 gccgaggtgg tgttgcccag gtgtccatcc gtggcgattc tggccacgag ccgctctcca
      601 ctcgacatcg agggggagct ggtgtggcaa gtgcccccgt tgtcgatgca gaaacgcggc
      661 gacgctagtg acacgggggc gtctgatgcg gcccggcttt tcgccgatcg ggccagccac
      721 gtgcaggcac ggttcgagct gagcgaggat gtcgctggag cggtcgaggc gatcgtgcgc
      781 aaagtagacg gcatcccctt ggctatcgag ctggccgcgg cacgggttcg tgtcctgtcc
      841 gctgaggaaa tcgccgacgg gctcgatgat catctgcaac tgctgcgtgg cggtcaccgg
      901 tcagatcctc gccaccagac catccgggcg tcgctggact ggagccagga actcctcacc
      961 gaccgggagc gtcagctgtt tgcccggttg tccgtcttct cggtgggctt cgacctggaa
     1021 gccgccgcga cggtgtgcgc cgggcgtgcc atcgctcccg gccaggtact ggatgagatc
     1081 cagggcctag tggacaagtc gctgctggcc gtggagcgca aggcacgtac cacgcgcttc
     1141 cggatgcttg atttcgttcg
//
LOCUS       DASRPQ010000259         1193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1281324, whole genome shotgun sequence.
ACCESSION   DASRPQ010000259 DASRPQ010000000
VERSION     DASRPQ010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1281324"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..439
                     /gene="hpt"
                     /locus_tag="VFD73_03000"
     CDS             <1..439
                     /gene="hpt"
                     /locus_tag="VFD73_03000"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006166 - purine ribonucleoside salvage
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HZI72985.1"
                     /translation="AYPNGELLVLGLLKGSFIFLSDLVRKIERPIQVDFLVASSYGNR
                     KVSSGTVRLLYDPETRLEGKHILLVEDIIDTGKTLQRLMGLLGKRRPQSLAICALLDK
                     QLASEIRPELRFVGFKAPPAFLVGYGLDHAEDFRHLPFIADLE"
     gene            439..>1193
                     /locus_tag="VFD73_03005"
     CDS             439..>1193
                     /locus_tag="VFD73_03005"
                     /inference="COORDINATES: protein motif:HMM:NF018218.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent metallopeptidase FtsH/Yme1/Tma
                     family protein"
                     /protein_id="HZI72986.1"
                     /translation="MADRLPNRPPRTNWGNLSKNLALWLLVGLLALALFQMMSRQRNP
                     TQEFSYTEFSKQLDQGNVARVEVFDGKRLEGDFKSPVTQDGRSAKSFQVLLPVANSEA
                     FIKRLEDANVPILAKEPKGGITAIVIAALPWIVILGLWFFLLRQLQAGGSRAFAFGKS
                     KAKLLAGDTPKVTFADVAGADEAKVELQEIIEFLKDPQKFTRLGGRLPKGALLVGPPG
                     TGKTLLAKAVEGEAGRPFFSMSGSDFVEMFVGVG"
BASE COUNT          222 a          343 c          389 g          239 t
ORIGIN      
        1 cgcctatccc aatggcgagc tgctggtttt gggactcttg aaggggagct tcatctttct
       61 gagcgacctg gtccgcaaga tcgaacggcc gattcaggtc gactttctgg tggcgagctc
      121 ctacggcaat cggaaggtct ccagcggaac ggtccggctg ctctacgatc ccgagactcg
      181 gctggaaggc aaacatatcc tgctggtcga ggatataatt gatacaggaa agaccctgca
      241 gcggctgatg gggctgctgg gcaagcggag gccgcagagt ctggcgatct gcgccctgct
      301 ggacaaacag ttggcgtccg agattcgccc ggagctccgg ttcgtggggt tcaaggcacc
      361 accggcgttt ctagtcggtt atgggctcga tcacgccgaa gattttcgac atctcccgtt
      421 catcgcggat ttggagtaat ggcagaccga cttcctaatc gtcccccccg caccaactgg
      481 ggcaatctga gcaagaacct tgcgctgtgg ctcttggtag ggctgctcgc gctggcactc
      541 ttccagatga tgagccgcca gcggaacccg acgcaggagt tctcctatac cgaattcagc
      601 aagcaactgg atcagggcaa tgtggcccgg gtcgaggtat tcgatggcaa gcgcctcgaa
      661 ggcgatttca agagcccggt gacgcaggac ggcaggagcg ccaagagctt ccaggtgttg
      721 ctgccggtcg ccaacagcga ggcgttcatc aagcgtctgg aagacgcgaa cgttcccatc
      781 ctggccaagg agccgaaggg tgggatcacc gcgatcgtca ttgcggcgct tccctggatc
      841 gtgattctgg gcctctggtt cttcttgttg cgtcagctgc aggcgggcgg cagccgggcc
      901 ttcgcgtttg gaaaatccaa ggccaagctt ctagccggcg acacgcccaa ggtgacgttt
      961 gccgacgtgg ccggcgctga tgaggccaag gtcgagctgc aggaaatcat cgagttcctc
     1021 aaggacccgc agaagttcac ccggctgggc ggacgcttgc ccaagggagc cctgctggtg
     1081 gggccgcccg gcaccgggaa gacccttttg gccaaggctg tggagggcga ggccggccga
     1141 cccttcttct cgatgtccgg ctcggatttc gtggagatgt tcgtcggcgt cgg
//
LOCUS       DASRPQ010000260         1735 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3171300, whole genome shotgun sequence.
ACCESSION   DASRPQ010000260 DASRPQ010000000
VERSION     DASRPQ010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1735
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3171300"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1072)
                     /locus_tag="VFD73_03010"
     CDS             complement(<1..1072)
                     /locus_tag="VFD73_03010"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI72987.1"
                     /translation="MSRKFAVSLPALALIVAAGCGRSHKTETTSSSGANTPTVSGSTT
                     SRGGNDSSTNAPVPVTYASAESAFKSGDYPAATELFTRYTQSNPDNAWGFYMLGVAAW
                     KKGEPKNALEAFDRALQIDPDHQKSLFNSSRVLLDMNRPQQALKRIEQALGREPMSNE
                     GLRLLGRARYQSGKVDEAIDAYRKALAVDPNDVWSMNNLALIYLDQNRSQEAIPPLAR
                     AVELRTHAPVFQNNLGMALERSGYPTAAAKAYETAIALDSSYQKASVGLSRVTGGGQT
                     PEETPVDLSRLSQQFQDEISGWQADSPVDSTVTRPVNDSTSGAGHEDQSSSVDSSPAL
                     GISDSAPASVEAVSDSVEDCEQD"
     gene            complement(1280..>1735)
                     /locus_tag="VFD73_03015"
     CDS             complement(1280..>1735)
                     /locus_tag="VFD73_03015"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI72988.1"
                     /translation="VPPLRDHLSDVPELAERFLVSIAERFGIRPKRLSADALEALMRY
                     DWARNNVRELKNALERMIIAADGEVLQAEHVPLEIQEQSRPKKPAAGKRSFYSLREEA
                     ERQIVAAALERNDWHITRTAEELGLADHASLLKVMRRLNLRREDRSQSK"
BASE COUNT          294 a          540 c          543 g          358 t
ORIGIN      
        1 aatcctgctc acaatcttcg acactgtcgc tgaccgcctc gacggaggcc ggggccgagt
       61 cgctgatacc cagtgcggga gacgagtcga ccgagctgct ctgatcctcg tgacccgctc
      121 cgctggtgga atcgttgacc ggtcgggtca cggtcgagtc gaccggagag tcggcctgcc
      181 aaccggagat ctcgtcctgg aactgctgag acagacggct caggtccact ggagtttcct
      241 ccggggtctg gcctcccccg gtcacccgcg agagcccgac cgaggccttc tgatagctgc
      301 tgtccagggc gatcgccgtc tcataggcct tggctgctgc agttggatat cccgagcgct
      361 ctagcgccat ccccagattg ttctggaaca ccggcgcgtg ggttcgaagc tcgaccgctc
      421 gtgccagcgg gggtatggcc tcctgactcc gattctggtc gagatagatc aaggccaggt
      481 tgttcatcga ccagacgtcg ttggggtcga ccgccagcgc ctttcgatat gcgtctatgg
      541 cttcgtccac ctttccgctt tggtagcggg cccggccgag cagacgcagg ccttcgttgg
      601 acatcggctc gcgtccaagt gcctgctcga tccgtttaag cgcctgctga ggacggttca
      661 tgtccagcag cacccggctc gagttgaaga ggctcttctg gtgatccgga tcgatctgga
      721 gcgcgcgatc gaacgcctcg agcgcgttct tcggctcgcc tttcttccag gcagcgacac
      781 ccagcatgta gaatccccag gcgttgtccg ggttgctctg ggtataccgg gtaaacaact
      841 cggtcgcggc cggataatcg ccagacttga acgctgactc ggccgacgca taggtgaccg
      901 ggaccggagc gtttgtgctc gagtcattcc ctcccctgga ggtggtgctt cccgacactg
      961 tcggcgtgtt ggctccgctt gacgacgtgg tctcggtttt gtgcgagcgc ccgcatcctg
     1021 cggccacgat caacgccaga gcgggcaacg aaactgcgaa cttgcgggac atagtttcct
     1081 cctcgatgtg ggcgccgtcg aagcgcagtg aacacgccct ttctcaaggc aagcaggcgg
     1141 ccacaaacga ggcggtgacg gggctgtacg aaaagagact gaatgaaaac gacttagcga
     1201 gaggttgctg gggcgctcgg gtggttgccg tgtccggccg gacacgaact ctcagtggcg
     1261 acgtgtcctc ctggacacgc tacttcgact gactccggtc ctcccttcga agattgagcc
     1321 ggcgcatcac cttgagaagg ctggcgtgat ctgccaggcc caactcttcc gcggtgcggg
     1381 tgatatgcca gtcgttccgc tccagggctg cggcaacgat ctggcgttcg gcttcttccc
     1441 ggagactata gaagctccgc ttgccggccg ctggtttctt cgggcgactc tgctcctgga
     1501 tctccaacgg tacgtgctcg gcctgtagta cttcgccgtc ggcggcaatg atcatgcgct
     1561 cgagcgcatt tttcagctcg cgaacattgt tcctagccca gtcgtaccgc atgagggcct
     1621 cgagagcgtc ggccgagagc cgctttggcc gaatcccaaa ccgttcggcg atcgatacca
     1681 gaaaacgctc ggccagctcc ggcacatcgg agagatggtc gcggaggggc ggaac
//
LOCUS       DASRPQ010000261         4141 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1281591, whole genome shotgun sequence.
ACCESSION   DASRPQ010000261 DASRPQ010000000
VERSION     DASRPQ010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4141
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1281591"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..1818)
                     /gene="recJ"
                     /locus_tag="VFD73_03020"
     CDS             complement(64..1818)
                     /gene="recJ"
                     /locus_tag="VFD73_03020"
                     /inference="COORDINATES: protein motif:HMM:TIGR00644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008297 - single-stranded DNA
                     exodeoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HZI72989.1"
                     /translation="MTVPDTDTLPKVSVFPPPVLRWRVVPAPDQLQAQALAATLKLPL
                     ALAALLLQRGHGTEEAARRFLRPSLSELSDPTLIAGMGEAVEAIAGTVRAGGRIFVHG
                     DYDVDGQCASALLTRALRVAGADVLPFLPHRLRDGYDFGPAGLEAARAAGVSLIITCD
                     CGITAVDTVVAANAAGIGVVITDHHLPGTELPPALAVVDPQRNDDSSGANALCGTGIA
                     FKLVQALVPALGLPPNLPFHLLDLVALATVADVVPLQGENRILVKHGLKLLHQSPWPG
                     LRALLDATGLAGKEVRAHHLGFILGPRLNAAGRVGDATDGLRLLLSDDAGEAAELARR
                     LVSLNVERQALDQRILDEALEQVERTGNPERDAGFVLVGDGWHPGVVGIVASRVVERY
                     GRPTFLIAFDGEIGKGSGRSTSRFNLHDALLTCGDLLERYGGHHMAAGLTIRRGRLDA
                     FRERFGDAARQALGPDDLGPEQRVDLEVGLHEVTRDLERLCRYLEPCGQGNPSPVFGV
                     RGVRFTNRSVVGTGHLKGALDDGRTRLWAIGFQWADRVPWLGDGLVDAAFRIECDEYN
                     GLTSLQAKLCALTPHVPG"
     gene            complement(1815..2534)
                     /locus_tag="VFD73_03025"
     CDS             complement(1815..2534)
                     /locus_tag="VFD73_03025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72990.1"
                     /translation="MRPELITLLDLQAKDAALSEADAKLAAVREETAQMDQALARARE
                     SVEAARRALADGRKRRDELETKIESYRTLQERRRQRLEQVRNPKEASAVMAELDLAKS
                     VMAKEESEWVRSADAVVQLEHRVDTEELNLKTLEASQAEERGRLDDRRRALQAERDTA
                     HDQREATAALIDKPLRTRYDRLRRTRNSNVVVPLIGGACGGCHTAVPLNRRSQIRSGA
                     VLDGCEACGAILYPAELGGST"
     gene            complement(2535..>4141)
                     /gene="dnaG"
                     /locus_tag="VFD73_03030"
     CDS             complement(2535..>4141)
                     /gene="dnaG"
                     /locus_tag="VFD73_03030"
                     /inference="COORDINATES: protein motif:HMM:TIGR01391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HZI72991.1"
                     /translation="GDVFSWFMKRAGMTYPDAVREVARRVGITIPERAERAGPDPHEP
                     LFSAVAVAHDWFTRQLLESPDARIAREYLERRALPLETAAMLGLGFAPHGKAFLDAMN
                     TLGVQQEVLLSAGLAAQRDDGQVSARFRGRLLFPIHDLRGRAVGFGGRLLVEGEPKYL
                     NSPETEIFHKGRQLYNLHQAKGPIRKEESVILVEGYFDVLRLVLAGVEHVVAPLGTAL
                     TPDQAALLKRFTPAATLLYDSDQPGLRATFRSGDELLKHGIRVRVATLPPGEDPDTLV
                     QTGGVAALDEVLHDAVDLLERKIQLLERKGYFESFEHRREAVDRLLPTIRAATDPITR
                     ELYLALVAERTGISKEVLEGELAAPVRGSVQSSPGRDGAAAGPPRSRYQSSAGRRARR
                     NPESQLLTTLLAGPEWIDKARAEVPPELLENPRLREVYEAVLRTDPDAEQMPQGLSDS
                     AAATWSALKEAAHEISRHELASIYDRATQILRARPLYREMHALADPGSKQRRRAELRT
                     QYPAADAWYEYQKAARREARNASRGR"
BASE COUNT          688 a         1405 c         1341 g          707 t
ORIGIN      
        1 cttggggagg accagtcggc gtccaccaaa ctgcccggcg acgattcgca cggggctggg
       61 cgatcaacca gggacgtgag gtgtgagggc gcagagcttg gcttgcaaac tggtcagccc
      121 gttgtactcg tcgcattcga tgcgaaaggc ggcgtccacc agcccatcgc ccagccaggg
      181 gacccgatct gcccactgga atccgatggc ccagagccga gtgcgtccat cgtcgagggc
      241 gcccttcaaa tgcccggtgc ctaccacact ccggttcgtg aaccgaacgc cgcggactcc
      301 aaacaccggg ctgggattgc cctggccgca gggctccaga taccggcaga gccgttcgag
      361 gtcgcgggtg acctcgtgaa gaccgacctc gaggtcgacc ctctgctccg gaccgagatc
      421 gtctggcccg agcgcctgac gggcagcgtc gccgaagcgc tcgcgaaacg catccaatcg
      481 tccgcggcga atggtgagcc ccgcggccat atggtgcccg ccgtagcgct ccaacagatc
      541 gccgcaggtg agcagcgcat cgtggaggtt gaagcgggag gtgctgcggc ctgagccttt
      601 gccgatttca ccatcgaagg cgatcagaaa agtgggacgg ccgtagcgtt cgacgacgcg
      661 cgaggcgact atgccgacga ctccgggatg ccagccgtcg cccaccagca cgaaccccgc
      721 gtcgcgttcc ggatttcccg tgcgctccac ctgctccagt gcctcatcga gaatgcgctg
      781 atccagtgcc tgacgctcga cattcaagct caccaagcgc cgggccaact ccgcggcctc
      841 acccgcgtcg tcggagagca ggagtcgcag cccgtcagtg gcatcgccga cccgcccggc
      901 cgcattgagc cgagggccca aaatgaagcc gagatggtgg gcccgaacct ctttcccggc
      961 aagccccgtg gcatccagca gtgcccgcag tccgggccag ggactttgat ggagcagctt
     1021 gaggccgtgc ttgacgagga tgcggttttc cccctgcagc ggcacgacgt cggccacggt
     1081 ggccagtgca accaggtcca gcaggtgaaa gggcagattg ggcggcagcc ccagggcggg
     1141 aaccagcgcc tgcaccagct tgaacgcgat gccggttccg cagagcgcat tggcacccga
     1201 gctgtcgtcg ttccgttgtg gatccacgac cgccagcgcg ggaggcagtt ccgttcccgg
     1261 caggtggtga tcggtaatca ccactccgat accggcagca ttggcggcga ccaccgtgtc
     1321 gacggcggta atgccgcagt cgcaggtgat gatcagcgac actccggccg cgcgcgccgc
     1381 ttccagaccg gccggaccga agtcgtagcc gtcgcgcaac cggtgcggga gaaacgggag
     1441 gacgtcggct ccggcgactc ggagcgcccg ggtaaggagg gcagaggcac actgcccatc
     1501 cacgtcatag tctccatgca cgaaaatccg gccgccggcc cggaccgtgc cggcaatggc
     1561 ttccactgct tcgcccattc cggcaatcaa ggtgggatcg gagagctcgc tcagcgaagg
     1621 gcggaggaag cgccgcgcag cctcttccgt gccatgcccc cgctgcagca gcaaggcggc
     1681 gagcgccagc ggcagtttga gcgtagccgc gagcgcctgt gcctgcagct ggtcaggggc
     1741 agggacgacg cgccaccgga ggaccggagg gggaaagaca ctcaccttgg gcagtgtatc
     1801 ggtgtcggga accgtcacgt tgaccctccc agctcagccg ggtacagaat cgccccgcat
     1861 gcctcgcagc cgtccagcac cgcgcccgat ctgatctggc tccggcggtt gagcgggact
     1921 gccgtgtggc agcccccgca ggcgccgccg atcagaggca ccacgacgtt gctgttccgg
     1981 gttcggcgta gccggtcgta acgggttcgg agcggcttgt cgatcagagc ggcggttgcc
     2041 tcccgctgat cgtgggccgt atcgcgctcg gcctggagcg cgcgccggcg atcgtcaagc
     2101 cgtcccctct cctcagcctg ggatgcttcc agcgtcttga gattcaattc ttcggtgtcc
     2161 actctgtgct ccagctgcac gactgcatcg gcgctgcgca cccactcgct ttcctccttt
     2221 gccatgaccg acttggccag atcgagctct gccatgaccg cggaggcctc cttcggattg
     2281 cgcacctgct ccaggcgctg gcgccgcctc tcctgcagcg tccggtagct ctcgatcttc
     2341 gtctcgagct cgtcgcgcct ctttcgccca tcagccagcg cccgccgagc ggcctcgaca
     2401 ctctcgcggg ctcgggccag ggcctgatcc atttgggcag tttcctcgcg aacggcggca
     2461 agcttcgcat ctgcctcgct gagtgccgca tccttggcct gaagatcgag cagggtgatc
     2521 agctcaggcc gcattcaccg tcccctcgaa gcattccttg cctctcgtcg agctgccttc
     2581 tggtactcgt accaggcatc ggcagcaggg tactgggtgc ggagttcagc cctccttcgc
     2641 tgcttgcttc ccgggtcggc aagggcgtgc atctcgcggt agagcggccg agctcggagg
     2701 atctgtgttg cacgatcgta gatgctcgca agctcatgcc ggctgatctc gtgcgcggct
     2761 tccttcagcg ctgaccaggt ggccgcggca ctgtcgctca gaccttgagg catctgctcg
     2821 gcgtcgggat cggtacgcag caccgcttca tacacctctc ggagtcgagg gttttccaac
     2881 agctccggtg ggacctcggc acgagccttg tcgatccact ccggccccgc gagcaatgtc
     2941 gtgagcagct ggctctccgg attccggcga gctcggcgac cggcgctgga ctggtaacgg
     3001 gaccggggcg gacctgcggc tgcgccatcc cggccaggag atgattgcac cgagcctcgg
     3061 accggcgccg ccagctcgcc ctccaggact tccttgctga tgccggtccg ctctgccacg
     3121 agagcgaggt acagctcgcg ggtgatcggg tccgtggccg cgcggatcgt cggcaggagc
     3181 cgatccactg cctcacgacg gtgctcgaag ctctcgaagt aacccttccg ctcgaggagc
     3241 tggatcttcc gctcgaggag gtcgaccgcg tcgtgaagca cttcgtccag agccgccacg
     3301 ccgccggtct gcaccagggt atcggggtcc tcgcccggtg gtagcgtggc gacgcggact
     3361 cgaattccgt gtttcagcag ctcgtctccg ctgcgaaagg tcgctcgaag cccgggttga
     3421 tcgctatcat agagcagcgt ggccgcaggg gtgaagcgct tgagcaacgc tgcctgatcc
     3481 ggggtcagcg cggttcccaa tggtgcgacg acatgctcca cgccggccag caccagtcgt
     3541 aacacatcga aatacccctc gaccaggatg accgattctt ctttccggat cgggcccttg
     3601 gcctggtgca ggttatagag ctgtcttccc ttgtggaaga tctccgtctc cggtgagttg
     3661 agatacttgg gctcgccttc gaccaacaag cgcccaccga agccaacggc gcggccgcgg
     3721 agatcgtgaa tcggaaaaag caaccgaccc cgaaatcgag cactcacctg cccatcgtct
     3781 cgctgtgccg ccagcccggc acttagcaga acctcctgct gcactcccag ggtgttcatg
     3841 gcatcgagga acgctttgcc gtggggcgcg aaccccaagc cgagcatggc cgcggtttcc
     3901 agcgggagcg cgcggcgctc caggtactcc cgggcgatgc gggcatcggg agattcgagg
     3961 agttggcggg tgaaccaatc gtgtgctaca gccacggcgg aaaagagcgg ctcgtgggga
     4021 tcgggcccgg cccgttcagc gcgctcgggt atagtgatgc ccacccggcg cgccacctcc
     4081 cgcaccgcgt cgggatacgt catgcccgcc cgcttcatga accaggagaa cacgtctcct
     4141 g
//
LOCUS       DASRPQ010000262         1266 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2848500, whole genome shotgun sequence.
ACCESSION   DASRPQ010000262 DASRPQ010000000
VERSION     DASRPQ010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2848500"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1025
                     /locus_tag="VFD73_03035"
     CDS             <1..1025
                     /locus_tag="VFD73_03035"
                     /inference="COORDINATES: protein motif:HMM:NF044559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72992.1"
                     /translation="RWIKEDPERAWQVFQRVVQEAPDDPDVLESVAFNLQLLLGERWE
                     EFLPRAVALVRSSPLLDVIVGPELLTREYYGPRYRDLDELAWVWVRQHCHSDASRRLS
                     ETIRTDPELGLDLALEIIERGPLHGLETDDLHDPLRELVQYQGAAVVDRVEAAARRSA
                     ALRQALWDMRRLNASPSSLAAVPADLWDRLMRAAGDTTLYNTPRPKGRRRSLGTELDE
                     LVDRWFIWKECFWAWCEVNDLVHEDAPKAWLVIQTLVRHAPDEETLGSIGAGPLEDLI
                     RIHPLKFIQPIEKLARRDERFRFALGCVWLKVEGAPEHLVRRYWNASGRELRVVDAPF
                     GWERGE"
BASE COUNT          230 a          377 c          403 g          256 t
ORIGIN      
        1 aacgctggat caaggaggac cctgaacggg catggcaggt atttcagcgg gtagtccagg
       61 aggctcccga cgatcccgat gtactcgagt cagtggcatt caatcttcag ctcctcctcg
      121 gcgagagatg ggaagagttc cttcctcgag ccgtcgctct ggtccgatct tcacctctgc
      181 tcgacgtcat tgtaggaccg gagctgctca cccgtgagta ctatggtccg cgatatcgag
      241 acctggacga gctcgcctgg gtttgggttc ggcagcattg ccattccgat gccagtcgtc
      301 gcctgagcga gaccatccgg actgatccgg aactaggcct ggatctggcg ctggaaatca
      361 tcgaacgagg gccgctgcat ggcctcgaga ccgacgacct gcatgatcca ttgcgcgagc
      421 tggtccaata ccagggcgca gccgtcgtcg accgagttga agctgccgca cgccgctcgg
      481 ctgcgctgcg gcaagcgtta tgggatatgc gacgcctgaa cgccagccct tcaagtttgg
      541 ccgctgtgcc ggccgatctc tgggatcggc tgatgcgcgc ggcgggcgat accacgttgt
      601 ataacactcc ccgcccgaaa ggccggcgcc gctcgctcgg gaccgagctg gatgaactcg
      661 tggaccgatg gttcatttgg aaggagtgtt tttgggcctg gtgcgaagtc aacgacctcg
      721 ttcacgagga tgcgccaaag gcctggctgg tgatccagac cctggtccgg catgcgccag
      781 atgaagagac gttgggaagt attggcgcgg gaccactgga agatctcatc cggatacatc
      841 cgctgaagtt tatccagccg atcgaaaagc ttgcgcggag ggatgagcgg tttcggtttg
      901 ccctggggtg tgtctggctg aaggtggaag gtgctccgga gcacctggtc cggcgatact
      961 ggaacgcgtc cggccgagag ctcagggtcg tggatgctcc attcggctgg gaaaggggcg
     1021 agtaaccttc gtacaccgtg ctccgcgtgg gcagcacgag tcccacaccc gtagagcccg
     1081 aaccgaaccc ggagttcacc atgaacgatt cccagctgcc gtcctccagc gccgagcttc
     1141 agctcagcgc ccatatcttc gccgtgtcgg ctgggctcgt tggcgtgtgc ctcactgtta
     1201 tcgggctctt ccgcgtcgtg gtgcgctcgc agcacatcga tagcattgcc gacaacctgc
     1261 ttgcca
//
LOCUS       DASRPQ010000263         1417 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_655313, whole genome shotgun sequence.
ACCESSION   DASRPQ010000263 DASRPQ010000000
VERSION     DASRPQ010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1417
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_655313"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..892
                     /locus_tag="VFD73_03040"
     CDS             <1..892
                     /locus_tag="VFD73_03040"
                     /inference="COORDINATES: protein motif:HMM:NF038287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Amuc_1100 family pilus-like protein"
                     /protein_id="HZI72993.1"
                     /translation="SSDMLWIKRNLFLTAGGLVAIVLLGVGIYYALNAVSRNSTLDGE
                     LEQNTSTLTRLYGQDPFPATTNVDAARRETERVRSAVGRMRKFFAAPPVERVTGLAFR
                     SYRDNLLAELRETAKNAGMETPSGSYAFSFEEQRTRVDFDPRTFPLIPEQMADVRAIC
                     NVLAESRVNPLVNIRRSRVSGDDERSSHQSDYHLLGLVTNVAMGVVTSPYEVTFQSLS
                     SELAAVLQKLAASPYGMVVKSVAVDPVGEDTRQAPRRTAAVAPKPGSDRGVTVLNERR
                     FQVNLLIYVVRAVDVPKAAK"
     gene            951..>1417
                     /locus_tag="VFD73_03045"
     CDS             951..>1417
                     /locus_tag="VFD73_03045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72994.1"
                     /translation="MLVLVLVLMAGAALVIYGQSQEQRDRIQKIPVGFVNTKVKGVKP
                     VDLTRVEQSIKAAASPPNVVLSGNHNLFNPVRWMHNPGQPLIKVETGRELGPSKLLIE
                     KIRPLNLIITLERAVTSGPADQKVVIGYQTIVTNDMATRITARKIAQFMAVNET"
BASE COUNT          273 a          441 c          459 g          244 t
ORIGIN      
        1 aagctctgac atgctctgga ttaagcgaaa tctctttctg accgccggcg ggctcgtggc
       61 catcgttctg ctcggggtcg gaatctacta cgcgctgaac gcggtcagcc gtaactccac
      121 gctcgacggc gagctggagc agaacacgtc caccctgacc cgcctctacg gccaggatcc
      181 gtttccggcc acgaccaacg tggacgcggc caggcgggag acggagcgcg tgaggtccgc
      241 ggtgggccgc atgcggaaat tctttgccgc gcccccggtg gagcgggtga ccggcctggc
      301 ttttcgctcc tatcgggaca acctgctggc ggagctgcgc gaaaccgcca agaacgccgg
      361 catggaaact ccgagcggga gttatgcgtt ctcgtttgag gagcagcgga cccgggttga
      421 tttcgatccg cgcacgtttc cgctcatccc ggagcaaatg gccgatgtcc gggcgatttg
      481 caacgtcctg gcggagtcgc gggtgaatcc gctggtcaac atccgtcgca gccgcgtctc
      541 aggcgacgac gaacgcagca gccatcaaag cgactaccac ctgctggggc tggtgaccaa
      601 cgtggccatg ggcgtcgtga ccagccccta cgaagtcacc ttccagagcc tgagctccga
      661 gctggcggct gtgctgcaga agctggccgc ctcgccctat ggcatggtgg tcaaatcggt
      721 ggcggtggac ccggtgggag aagatacgcg ccaggccccc cgccggacgg cggccgtcgc
      781 gcccaagccc ggctccgatc gcggagtgac cgtgctgaac gagcgccggt tccaggtgaa
      841 tttgttgatt tacgtcgtgc gggcggtgga cgtgccgaag gccgccaagt aagcgtatgg
      901 agcaactcaa acgaatcggc ggagtttgtc ggaagcacta cgagaagatc gtgctggtcc
      961 tcgtgctggt gctcatggcc ggggccgcgc tggtgatcta cggacagagc caggagcagc
     1021 gggatcggat ccagaagatc ccggtcggct ttgtgaacac gaaggtcaag ggcgtgaagc
     1081 cggtggatct gacccgcgtg gagcagtcga tcaaggcggc ggcctctccg cccaacgtcg
     1141 tgctcagcgg caatcataat ctcttcaacc cggttcggtg gatgcacaac ccgggccagc
     1201 cgttgatcaa ggtcgaaaca gggcgggaac tcgggcccag caaattgctc atcgaaaaga
     1261 ttcgtcccct gaatctcatc atcacgctcg agcgcgccgt cacctccggc cccgccgatc
     1321 agaaggtcgt catcggctac cagacgatcg ttacgaatga catggccacg cgcatcaccg
     1381 cgcgcaagat cgcccagttc atggcggtca acgaaac
//
LOCUS       DASRPQ010000264         2478 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1916030, whole genome shotgun sequence.
ACCESSION   DASRPQ010000264 DASRPQ010000000
VERSION     DASRPQ010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2478
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1916030"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..300
                     /locus_tag="VFD73_03050"
     CDS             <1..300
                     /locus_tag="VFD73_03050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI72995.1"
                     /translation="MALTAVTRTYLEMSSPDELRPAPTPTPEPKLERVQDCSVALFRF
                     LYREVGRTYHWTDRLDWSDSTIASYLADPDVSLWMLSWEGIPAGYFELKRDAEWH"
     gene            complement(670..2055)
                     /locus_tag="VFD73_03055"
     CDS             complement(670..2055)
                     /locus_tag="VFD73_03055"
                     /inference="COORDINATES: protein motif:HMM:NF009709.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophanase"
                     /protein_id="HZI72996.1"
                     /translation="MHTIIEPFKIKAVEPIRMTTPEERDRKLRDAGFNVFLLRAEDVL
                     IDLLTDSGTAAMSSEQWAAIMRGDESYAGSRSWYRFEQAVRDIFGFRYVLPTHQGRAA
                     ERILFSLLCKPGDVVPSNTHFDTTRANIEFAGAEARDLLTSVGKVPSAHHPFKGNMDV
                     DQLERLIAEVGRERIPLCMLTVTNNSGGGQPVSMANVRAVSRICRTHRIPFYIDACRF
                     AENAYFIKLREEGYADKAPVEIARELFSHADGCTMSAKKDGIANIGGFLATNDEGLAA
                     RQRNLLILTEGFPTYGGLAGRDLEAIAVGLHEALNEDYLLYRIRSTTYLGEHISRAGV
                     PIVQPPGGHAIYIDAAAFFPQIPALELPGQALVVELYREAGIRAVEIGTVMFGKRDPV
                     SGEEIPGPQELVRLAIPRRVYTQSHIDYVVEAILQVWARRAGVTGYRFVEQAPMLRHF
                     TAKFQALAAGP"
     gene            complement(2097..>2478)
                     /locus_tag="VFD73_03060"
     CDS             complement(2097..>2478)
                     /locus_tag="VFD73_03060"
                     /inference="COORDINATES: protein motif:HMM:NF013231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HZI72997.1"
                     /translation="GRSPAQSVNELAELTRTHQSSVSVVVSRLVQRGLAARRQAADDA
                     RRVELRITAAGQALLRRSPASPQTRMIAALERMPSSAREKLAELLENMVREMGAAMEP
                     AAMFFEEARSAPARARRRRRTSQR"
BASE COUNT          435 a          801 c          800 g          442 t
ORIGIN      
        1 atggccctga ccgccgtcac ccgcacatac ctcgagatgt catcgcccga cgagctccgg
       61 ccggcgccca cgccaactcc ggaaccgaag ctggaacggg tccaggattg cagcgtggca
      121 ttgttccgct ttttgtatcg cgaagtcggg cggacctacc attggaccga tcggctcgac
      181 tggagcgaca gcacgatcgc gagctatttg gctgatcccg acgtgtcact gtggatgctc
      241 tcgtgggaag gcattcccgc tggctatttc gagctcaagc gagacgcgga gtggcattga
      301 gatcgcttac ttcgggctga cgcccggctt catcggacgt ggctggggga aatacctgct
      361 cacccgggca gtcggtgccg cctgggagct cggcacgcat cgagtgtggc tgcacaccag
      421 tactctggat cacccggcag cgctcccgaa ctacttgaag cggggtttcc gagcggtgcg
      481 gagagaggtg tatcacgtaa gcggggcagc ggggcaccgg ggcagcgggg cagggaagtc
      541 ggagtagaaa ctggcgggga aggccgaaaa ggaagcgcct tatcctccgg gctgttcctg
      601 gcgttttcct tccactgatt tacctcccgg gaccggtaag ccgatccagg atcgcagcag
      661 catcagcatc tagggcccgg cggcgagcgc ctgaaatttc gcggtgaagt gacggagcat
      721 cggcgcctgc tccacaaagc gatagccggt gacgccggca cgccgagccc agacctggag
      781 gattgcctcc acgacgtagt caatatgact ctgggtgtac acccgtcgcg ggatcgcgag
      841 ccggaccagc tcctgcgggc cagggatttc ctccccgctc accgggtcgc gcttgccgaa
      901 catcacggtt ccgatctcga ccgcgcgaat tccggcctca cggtagagct ccaccaccag
      961 tgcctgtccc ggtagctcca gcgctggtat ctgggggaag aacgccgccg cgtcgatata
     1021 aatcgcgtgc cctcccggcg gctgcacgat ggggacacca gcgcgggaga tatgctcgcc
     1081 gaggtaggtg gtcgagcgga tacggtacag caggtagtct tcgttgagcg cctcgtgcag
     1141 tccgaccgca atggcctcga ggtcccgccc cgccagtccg ccataggtcg ggaacccctc
     1201 ggtcaggatc agcaggttgc gctgcctggc cgcgagccct tcgtcattgg tcgcgagaaa
     1261 ccccccgatg ttcgcgatcc cgtccttctt ggccgacatg gtgcagccgt cggcgtggga
     1321 aaacagttcc cgcgcgatct cgaccggagc tttgtcggcg tagccctcct ccctcagctt
     1381 gatgaagtag gcgttctccg caaaccggca ggcgtcgatg tagaacggta tgcggtgagt
     1441 acggcagatc cgggataccg cacggacatt ggccatcgag accggctggc cgccaccgga
     1501 gttgttggtc accgtgagca tacagagcgg aatccgctcg cgacccacct ccgcgatcaa
     1561 ccgctccagc tggtcgacgt ccatgttgcc tttaaatgga tggtgcgccg acgggacctt
     1621 gccgacgctg gtgagcagat cccgcgcttc ggcgccggcg aactcgatgt tggcccgagt
     1681 agtgtcgaag tgggtgttgc tgggcacaac gtcgcctggt ttgcagagta gggaaaagag
     1741 aatccgctcc gctgccctgc cctggtgggt cggaagcacg tagcggaagc cgaagatatc
     1801 gcgcaccgcc tgctcgaacc ggtaccacga acggctgccg gcgtaggatt cgtcgccccg
     1861 catgatcgca gcccactgct ccgagctcat cgccgccgtc ccgctatcgg tcagcagatc
     1921 gatgagcacg tcttccgccc gcagcaggaa aacgttgaag ccggcgtcgc ggagcttgcg
     1981 gtcgcgctcc tccggtgtgg tcatgcggat cggctcgacc gccttgatct tgaacggctc
     2041 gatgatggtg tgcatggagg taaactgaag cgggacggcg aatctgtaca gcgaaatcag
     2101 cgctgagatg ttctgcggcg ccgacgcgcg cgtgccggag ccgaacgcgc ttcctcgaag
     2161 aacatcgccg caggctccat cgctgcaccc atctcgcgaa ccatgttctc cagcagctcg
     2221 gccaactttt cccgcgccga tgacggcatc cgctccaggg cagcaatcat ccgcgtctgc
     2281 ggactggccg gtgagcggcg cagtaacgcc tggcccgccg cggtgatccg gagctcgacc
     2341 cggcgcgcgt cgtccgctgc ctgcctgcgt gccgccaggc cgcgttgcac cagtcggctc
     2401 accaccacag acaccgagct ttggtgcgtc cgggtgagct cggccagctc attgaccgat
     2461 tgcgccggcg atcggccc
//
LOCUS       DASRPQ010000265         1270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_344518, whole genome shotgun sequence.
ACCESSION   DASRPQ010000265 DASRPQ010000000
VERSION     DASRPQ010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1270
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_344518"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..246
                     /locus_tag="VFD73_03065"
     CDS             <1..246
                     /locus_tag="VFD73_03065"
                     /inference="COORDINATES: protein motif:HMM:NF015087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016051 - carbohydrate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate synthase family protein"
                     /protein_id="HZI72998.1"
                     /translation="SDHTRRVETGAFAVCAGADYVEVHYRLDDTAESCPDYPVSLTPD
                     ELDTYVKLARAAWLMRGDGKKAPQMAERDNLKYRVIR"
     gene            243..638
                     /locus_tag="VFD73_03070"
     CDS             243..638
                     /locus_tag="VFD73_03070"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI72999.1"
                     /translation="MNLRPATDDDCLYFFQLRCEPVASAMSRRRAPTWEEHVRWWEQT
                     TDLRFVAQETLVRVGTLRLSQDGIVSIIVDRNERGRGFGPAMLKALEPYAQAAGITTM
                     LAEIAYENERSQKAFTNAGWRPVLMEKHV"
     gene            761..>1270
                     /locus_tag="VFD73_03075"
     CDS             761..>1270
                     /locus_tag="VFD73_03075"
                     /inference="COORDINATES: protein motif:HMM:NF014409.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73000.1"
                     /translation="MASPLVIIQARENSSRLPGKIHADICGMSMLSHVVMRASRIAPV
                     VIAMPSEEEDENDVLSRYARVARANPGADPIIRITADCPLLDSGLGLGMVDRYAQGRH
                     DILGTAPGFDGLDIEIFSRVALRIADMFAQSRLDREHVTPWMKQHLLYEEITLRGPAL
                     RWSVDDEEGL"
BASE COUNT          247 a          373 c          413 g          237 t
ORIGIN      
        1 agtgaccata cgcgacgtgt cgagaccgga gccttcgcgg tgtgtgctgg tgccgattac
       61 gtcgaggtcc actatcgact ggacgacaca gcggagtcgt gccctgatta tccagtcagc
      121 ctcacccccg atgagctaga cacgtatgtg aagctggccc gcgccgcatg gctgatgcgt
      181 ggagatggga agaaagcgcc ccagatggcc gagcgtgaca atctcaaata ccgggtgatc
      241 cgatgaatct gcgtccagcg actgacgacg attgcctcta tttcttccag ctccggtgcg
      301 agccggtcgc gtccgcgatg tcccgccgga gagccccgac gtgggaagag catgtccgct
      361 ggtgggagca gaccaccgat ctccggttcg tcgcacagga gaccctggtt cgcgtcggga
      421 cgctccggtt gagccaggac gggatcgtct cgatcatagt ggaccggaac gagcgaggca
      481 gggggttcgg gccagcgatg ctgaaggccc tggagccgta cgctcaggcc gccgggatca
      541 ccacgatgct ggcagagatc gcgtacgaga acgagcgcag ccagaaggcg ttcacgaacg
      601 ccggctggag acccgtcctg atggagaagc atgtctaaga catacactgc tgggcatctg
      661 tggcttgttg tgctgatcgt gctttgttta atcggcccag atggatcggc agcggcttgg
      721 ttcttcagcg ggctcgtggc tactgtgaag gttaccgtag atggctagcc ctctagtcat
      781 aatccaggcc cgggagaatt cgtcccggct tcccgggaag atccacgcgg acatctgcgg
      841 gatgtcgatg ctgtcgcacg tcgtgatgcg agccagccgg atcgcgccgg tcgtgatcgc
      901 catgccgtct gaggaagagg acgagaatga cgtgctctcg cggtatgcca gggtcgcacg
      961 ggccaacccc ggcgctgatc caattatccg aatcacggct gactgccctc tgctggactc
     1021 gggactcggg ctggggatgg tggaccgcta cgctcagggt cgccacgaca tcctgggaac
     1081 ggctccaggg ttcgatggcc tcgatatcga aatcttcagc cgggtcgccc tccgaatcgc
     1141 ggacatgttc gcccagtcca ggctagaccg ggagcacgtc actccctgga tgaaacagca
     1201 cctgctgtac gaggagatca ccctacgtgg cccagccctc agatggtcag tcgatgacga
     1261 agaaggactc
//
LOCUS       DASRPQ010000266         1871 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3793385, whole genome shotgun sequence.
ACCESSION   DASRPQ010000266 DASRPQ010000000
VERSION     DASRPQ010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1871
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3793385"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..534)
                     /locus_tag="VFD73_03080"
     CDS             complement(<1..534)
                     /locus_tag="VFD73_03080"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dolichyl-phosphate beta-glucosyltransferase"
                     /protein_id="HZI73001.1"
                     /translation="MAGTVDLSIVIPAYNEEFRIEPTVRDIVMYCRERVRTFEVILVD
                     DGSRDGTTSVGRKLGEEFPELRVIRLAANHGKGYAVRSGVVNALGRLILFADADGATP
                     ISELERLERALDAGADVAVGSRAYPTSGVQVQAKLYRHLIGRTFHFFVERLTDAGVKD
                     TQCGFKLFQSRAAQDLFS"
     gene            complement(638..1588)
                     /locus_tag="VFD73_03085"
     CDS             complement(638..1588)
                     /locus_tag="VFD73_03085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73002.1"
                     /translation="MDVLPVAVCIVTFVFVWVGRSPPASWRLDFDYLWTAGRAVWQGT
                     DPYAAVNEAIRQGSLRWPFYYPGTAAVLMAPLGALSSQLAAAVFTALGLGFLTWSVQG
                     WRRWIVLSPPALEAMLLGQWSPWLTAAAAIPWLGFIWAAKPSVGAALFAGWPSRKAFF
                     GGLAILMLSLILLPHWPIEWLHTVQNTAHYKAPVQRVGGFLLLLAWLRWRRPEARMLG
                     ALALIPHTTNVYEQLPLFLVPQTGRSFATLMGLTYLATAIVYVRYPFGGSVSGTLDAR
                     WPYFLVLVWLPALLMALRLPNLPTLFGLLRKRLVLHKPDP"
     gene            complement(1659..>1871)
                     /locus_tag="VFD73_03090"
     CDS             complement(1659..>1871)
                     /locus_tag="VFD73_03090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73003.1"
                     /translation="DRTPELESKGFPTVWAALAANPSKLGALRDDSRWRPLGVRPGVG
                     LWTDDYSNIFSVFMWSVPHSERTKTP"
BASE COUNT          426 a          563 c          576 g          306 t
ORIGIN      
        1 ggaaaacaga tcctgagcgg ccctcgactg gaacagctta aagccgcatt gcgtgtcctt
       61 gacgccggca tcagtgagcc gctccacgaa aaagtggaag gttcggccga tcagatgtcg
      121 gtacaacttg gcttgcacct ggactccgct ggtcgggtac gcccgagagc cgactgccac
      181 gtcggcgccg gcgtcgagcg cccgctccaa tcgctcaagc tcactgatcg gcgtggcacc
      241 atcagcatcg gcaaagagga tcaaacgccc gagcgcgttc acaactccgc ttcggacagc
      301 gtatcccttg ccgtggttgg cagcgaggcg gatgacccga agctcgggga actcttcgcc
      361 cagcttccgg cctaccgagg tcgtgccgtc tctgcttccg tcgtctacca gaatcacttc
      421 gaacgtccgt actcgctctc ggcagtacat gacgatgtca cgaaccgtcg gctcgattcg
      481 gaactcttcg ttataggctg gaatgacgat ggataggtct acagtgcctg ccacgggtgc
      541 ctgtcagccg agtgcctgtg ggttggggag gagggtgata accgacctaa catgcaccaa
      601 aatccgggca attgccagtt cccctcgaat gcagggctta tgggtccggc ttatggagga
      661 cgagccgctt ccgtagcagg ccgaacaggg taggcaaatt cggcagccgc aatgccatga
      721 gcagggcggg aagccagacc agcaccagga aatagggcca gcgcgcatcg agagtgcccg
      781 ataccgatcc gccaaatggg tatcgcacat agacaatggc tgtggccaag taggtcagcc
      841 ccatgagcgt agcaaatgaa cgcccggtct gggggaccag gaagagcggt aactgctcat
      901 agacgttggt cgtgtgcggt atcagcgcca atgcgcccaa catcctggct tcgggtctcc
      961 gccagcgaag ccaggcgaga agcaggagaa atcctccgac gcgctgcacc ggcgccttgt
     1021 agtgtgcggt gttctgcact gtgtgcagcc actcgatcgg ccagtgtggc agcaggatca
     1081 acgaaagcat gagaatcgca agcccgccaa aaaaagcttt ccgagatggc catccagcga
     1141 acaatgccgc accaactgaa ggtttcgctg cccagatgaa cccaagccag gggatcgcgg
     1201 cagccgcggt gagccaaggc gaccactggc ccagaagcat cgcctctaac gcaggcgggc
     1261 tgagaacgat ccaccgtcgc cagccttgga cactccaggt caggaagccc aggccaagcg
     1321 cggtgaagac ggccgcggcc aactgactgg agagagctcc caacggagcc atcagaaccg
     1381 cagcggtgcc aggatagtag aaaggccagc ggagagagcc ctgacggatc gcttcattta
     1441 cggcagcgta gggatcagtg ccctgccaaa ccgcccgacc ggcggtccac agatagtcga
     1501 aatccagacg ccatgaagcc ggtgggctcc gcccaaccca gacgaacaca aaggtcacaa
     1561 tacatacggc aacagggagg acgtccaccc gtcgcactgg gtgcgattcg gagatatgaa
     1621 cctcaggccc ggttcatgaa ttcacacgct ggaggctgtc acggggtctt ggtccgctcg
     1681 gagtgcggca ccgaccacat gaagacactg aagatgttgg agtagtcgtc agtccagaga
     1741 ccgacacccg gtcggactcc cagcggtcgc catctgctgt cgtctcgaag ggcacccagc
     1801 ttggaaggat tggcggcgag ggcggcccag acggtcggaa atccctttga ttcaagctca
     1861 ggggtgcgat c
//
LOCUS       DASRPQ010000267         1625 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_344850, whole genome shotgun sequence.
ACCESSION   DASRPQ010000267 DASRPQ010000000
VERSION     DASRPQ010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1625
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_344850"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..321)
                     /locus_tag="VFD73_03095"
     CDS             complement(<1..321)
                     /locus_tag="VFD73_03095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73004.1"
                     /translation="MVEVDRGIMARDSYVARPQEETVATMEAGSVGEAVAGAAGLVLA
                     ILGLLGILPLTLDAIAGIALGVALLLGGAALAARYSRAIPPTALPRARHDISGALGLQ
                     AIAGI"
     gene            720..>1625
                     /locus_tag="VFD73_03100"
     CDS             720..>1625
                     /locus_tag="VFD73_03100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73005.1"
                     /translation="MITAFAPPSRFSASRVIARSNNIVPVLNLPNGPAAISSGTNLAF
                     TALRHSQFEIENLAKPLQCNLSGGDPMNRALLFPALITLAGLGACSNDQSTGPSASSG
                     TEALLTSQTGNGAPSGAHYNLNIIGVPKDKSPNFTGGDGHRIFVDLGKTGQVANTRIN
                     LREGDFQVLDANGTDGTAAFQLPNPDPDGDGTTSYSVYVRALGKPGGKASLQSCYEDA
                     TGTWCAVNFPGGVEPITVERSKGGVAKFDNVSKDLLFIDFCTAWSAGLDGILGTQDDV
                     CTSVDQVPLFSNNTLSYLWSYDNEGL"
BASE COUNT          317 a          542 c          464 g          302 t
ORIGIN      
        1 aatgccggcg attgcctgga gacccagcgc accgctgatg tcgtgacgag ccctcggcaa
       61 agcggtcggc gggattgcgc gtgagtagcg tgccgccaga gcggcgcccc cgagcagcaa
      121 ggcgacaccc agcgcaatgc cggcgattgc gtccagcgtg agcggcagaa tgccaagcag
      181 ccccaggatt gcgaggacca gccccgcggc acccgcgacc gcctcaccga ccgagccggc
      241 ctccatcgtt gcgacagttt cttcctgcgg ccgcgcgaca tagctgtcgc gagccatgat
      301 acctcgatcg acctcgacca tagtgaacct cgcaagtgat ggcgggcggc ctgccccgat
      361 cttcgatctc tgcgccggcc ggagcctcgc ccgccgggca acgattaccg gcgcgcgacc
      421 agtgcgagca atggaccggc tgcgaccctc ggggtccggc tgccaagcgg tgtactggac
      481 tgctggagag cgaactgcgg agggtgaaga gcggcagaca ctgcgtgttc ctttgccaaa
      541 gcatttgccc taccctggaa aaatatatgg gctcccatgc aatgcaagtc ccgcgatcgg
      601 gtgcccacct cctctgttta cccgatcagc ccgcctgccc gggtagctct gatgtcagtt
      661 cttcatccct ggcaagcgca ctttggaccc acaccgccaa tcgcgtaagt cttggcgcga
      721 tgatcacagc ctttgcaccg ccttcccgct tttccgcctc acgagtcatc gcccgcagca
      781 ataacatcgt cccggtgctc aacttgccca atggcccggc agccatctca tcgggcacga
      841 atctcgcctt tactgcgctc cgccattctc aattcgaaat cgagaatctc gcgaaacctc
      901 tccagtgcaa cctctccggc ggagatccca tgaaccgagc cctcctcttc cctgccctca
      961 ttacgctggc cggcctcggc gcctgcagca acgaccagag caccgggccc tccgcctcga
     1021 gcgggaccga agctttgttg acttcgcaga ccggaaacgg tgcgcccagt ggtgcacatt
     1081 acaatttgaa catcatcggt gtacccaagg acaagtcacc caatttcacc ggtggcgatg
     1141 gtcaccgcat ctttgtggat ctggggaaga caggccaggt ggcgaacact cgtatcaatc
     1201 tgagagaagg cgattttcaa gtgctcgacg ccaatgggac cgatggaacc gcagccttcc
     1261 agcttcccaa tcccgacccg gacggcgatg gcaccacttc ctactcggtg tacgttcgtg
     1321 cgctgggcaa gccgggcggg aaggcctctc tgcaatcctg ctatgaagat gccaccggca
     1381 cctggtgcgc cgtcaacttt ccgggaggcg tcgaaccgat cacggttgag cgcagcaaag
     1441 gtggggtggc caagttcgac aacgtgtcga aggatcttct cttcattgac ttctgcaccg
     1501 cgtggtccgc gggtttggac ggcatcctgg gaacgcagga tgatgtatgc accagtgtcg
     1561 accaggtccc gctgttcagc aacaacacgc tgtcgtacct ctggtcctat gacaacgaag
     1621 gactg
//
LOCUS       DASRPQ010000268         3582 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3172321, whole genome shotgun sequence.
ACCESSION   DASRPQ010000268 DASRPQ010000000
VERSION     DASRPQ010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3582
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3172321"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..371)
                     /locus_tag="VFD73_03105"
     CDS             complement(<1..371)
                     /locus_tag="VFD73_03105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HZI73006.1"
                     /translation="MIPSRGDLSMRECWRGILLAITLVSCRSGDPPPTPPLPVTVMQV
                     GNVSGGDNATRYSGSINADASVDVAFKVSGVVDEVTQIEGADGRRRNLQDGDRVRRGT
                     VLARLRPNEFRDQVADAEATLR"
     gene            complement(371..2797)
                     /locus_tag="VFD73_03110"
     CDS             complement(371..2797)
                     /locus_tag="VFD73_03110"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HZI73007.1"
                     /translation="MSNERRRGRQPTGFGINGQRARVRTLSVGIMCAIAAPLHAQSHP
                     PRIAFILDRESPRFAPLVNATQREIQGFFRPEEIELLPARAGDGTAAGISAELSRAMH
                     DSSIAAVVTLGPIGSHLLARSGSPAKPAIAGTIIDATWQGIPARDGASGVRHLAYVDP
                     SYPVGNTLADFHHLIPFHRIAILLDSDLLQAIPLLKASATAMVRKATGAEALVVSGSD
                     RADPVLAALPSGVDAVYLTPFPRMKDDEYARLIAGLNARRLPTLSYTADPDIRLGALA
                     SYEPPENWQRRARRIAVDLQRILAGDDAATLPVELVSAPRLTLNLSTARLIGVSPGWS
                     VLTDAELVGVDSAGPRDTLTLAEAMQQAQAANLDLAAADLDVASGRQEVTRSRANLLP
                     QIDSRISQTYTRQGTAAASLGQQPERLLDAGVTFSLPLYAEQAWAGYGSQQSLQRGRE
                     AERDKLRLDVVLDAAAAYLGVLQARTLADVQRSNLYRTRSNLEVARLREGVGSASRAD
                     IYRWQGEVATARRDLISAETQVRVAQLELKRLLNRQLQQPLAQQPVTLGDPALLAQDS
                     SVLSWFDDPARFAALTDFLVGYALRLSPELGQVDASISAQRRQHTAAGRALWLPTLSL
                     QGGLSNVFDRSGAGSTVPTLPSPIAFPTAPDMTWQLRVEATLPIFTGFENTATRVQTG
                     IDLDRLEVQRNAVKLAVDQRVRAAMETAAAAYAAIALTRDAAEAAGRNYTLVSDAYAN
                     GAASITTVLDAQSAALTSSEEAANAVHDFLLDLMKVERAMGTFGVLQPAEQRRAFLEQ
                     LRGVGQPKAP"
     gene            complement(2902..>3582)
                     /locus_tag="VFD73_03115"
     CDS             complement(2902..>3582)
                     /locus_tag="VFD73_03115"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI73008.1"
                     /translation="LLALTRGEPAPQPPLEVRVRPRYNPGLVSAFNIVPGLIGVLLTM
                     TLVAITAMALVRERERGTLEQLIVTPVARSSVILDKILPFVIVGHVQMTVILALGHFA
                     LSVPLRGSLLLLYGITFPFIVAVLGVGLLISTAVKTQTQAMQLSIFYMLPSILLTGFM
                     FPREAMPLVIRELGLLLPMTYYIGIVRGIALKDVGLFDVWQPALVLTLFALLLVTVSV
                     KRFSKTME"
BASE COUNT          649 a         1140 c         1207 g          586 t
ORIGIN      
        1 cgcaatgtcg cttctgcgtc ggcgacctgg tcccgaaact cgttgggacg gagccgagcg
       61 agcacggtac ctcgccgaac gcgatcgccg tcctgcagat tccggcgccg cccgtccgcc
      121 ccctcgattt gggtgacctc atcgaccacg ccgctgacct taaaggcgac atccaccgat
      181 gcatcggcgt tgatggaccc ggaatagcgg gtcgcgttgt ccccgccgga cacatttccg
      241 acctgcatta ccgtcaccgg cagcggcgga gtgggcggcg ggtccccgct cctgcagctg
      301 accaaggtga ttgccagcaa aatccctctc cagcactccc gcatgctcag gtctcctcgt
      361 gacgggatca tcatggcgct ttcggttgcc ccactccgcg cagctgctcc aggaaggcac
      421 ggcgctgttc cgccggctgg agcacaccga aggttcccat cgcgcgctcc accttcatca
      481 ggtcgagcag gaaatcgtgg accgcgttgg ccgcctcctc cgaggaggtg agtgctgcag
      541 actgagcgtc gagcaccgtg gtgatcgatg ccgcgccgtt cgcgtatgcg tcgctcacca
      601 gcgtgtaatt ccggcccgca gcctcggcgg cgtcacgcgt cagtgcaatc gcagcgtagg
      661 cagcggccgc cgtctccatc gcagcccgca ctctctggtc tacagccagc ttgaccgcgt
      721 tgcgctggac ctcgagtcgg tcgaggtcga tgccggtctg cacccgggtg gcggtgttct
      781 cgaagccggt gaagatcgga agcgtggcct caacccgaag ctgccaggtc atgtcgggcg
      841 cggtcggaaa cgcaatgggc gaaggcagcg tcggaacggt ggacccggcc ccactccggt
      901 cgaacacgtt gctgaggccg ccctggaggc tcagggtagg caaccagagc gcccgcccgg
      961 cggcggtgtg ctgccgccgc tgcgccgaga tggaggcatc gacctgaccg agctccggcg
     1021 agaggcggag cgcatagccg accagaaagt cggtcagcgc cgcgaagcgg gccggatcgt
     1081 cgaaccagct gaggacgctg gagtcctggg cgagcagggc agggtcgccc agtgttaccg
     1141 gctgctgggc cagcggctgt tgcagttggc ggttgagcag gcgcttgagc tcgagctgcg
     1201 ccacccgcac ctgagtctcc gcggaaatca aatcgcgccg cgcggtggcc acctcgcctt
     1261 gccagcggta gatgtctgcc cggctcgcgc ttcccacacc ttcacgcaag cgtgccactt
     1321 cgaggttgga gcgagtgcgg tacagattgg agcgctgtac gtcggccagg gtgcgagcct
     1381 gcagcacgcc gagatacgcg gccgcggcat cgagcactac gtcgagccgc agtttgtcgc
     1441 gctccgcctc gcggcctcgt tggagactct gctgcgagcc atagccggcc caggcctgct
     1501 ccgcgtagag cggcagcgag aaggtgaccc cagcatcgag cagtcgctcg ggctgttgtc
     1561 ccagactggc agcagcagtt ccctgacggg tataggtctg ggagatccgg ctgtcgatct
     1621 ggggcaggag gttggcccgg gagcgggtga cctcctgtcg accggaggcg acatccagat
     1681 cggccgcggc cagatccaga tttgccgcct gggcctgctg catcgcttcg gccagagtca
     1741 gcgtgtcgcg gggaccggct gaatcgactc ccaccaactc ggcatcggtg agcacgctcc
     1801 agccgggcga cacgccaatc aatcgagccg tggacaggtt cagggtgaga cgcggtgcac
     1861 tgaccagctc caccggaagc gtcgcggcgt cgtctcccgc gagaattcgt tggaggtcca
     1921 ccgcaatccg tcgggcgcga cgctgccagt tctccggcgg ctcatacgag gccaacgccc
     1981 cgagccggat gtcgggatcg gcggtgtaac tcagggtggg aagtcgccgg gcattgagtc
     2041 ccgcgatgag ccgagcgtac tcgtcatcct tcattcgggg gaacggggtg agatagacag
     2101 cgtccacgcc cgagggtagc gcggcaagaa ctggatcggc gcggtcgctg ccggagacca
     2161 ccagggcctc ggctccagtc gctttccgca ccatggcagt ggcactcgct ttcagcagcg
     2221 gaattgcctg gagcaggtcg gagtcgagca ggatcgcgat ccgatgaaac gggatcagat
     2281 gatgaaaatc ggcgagcgta ttgccgaccg ggtacgacgg atcgacatag gccaggtgcc
     2341 ggacgccact cgcaccgtca cgcgccggga tgccttgcca agtggcatcg atgatggtgc
     2401 cggcgatagc cggcttggcg ggggagcctg atcgcgccag caagtgggaa ccgatcggtc
     2461 cgagggtcac aaccgcggcg atcgatgagt catgcatcgc ccggctcagc tccgcggaga
     2521 tgccggcggc agtaccgtcg ccggcgcgag cgggcaagag ctcgatctcc tccgggcgaa
     2581 agaacccctg gatttcccgc tgggtggcgt tcaccagcgg tgcaaagcgt gggctctcgc
     2641 gatcgagaat gaaagcgata cgaggcggat gactttgagc gtggagaggg gccgcgatcg
     2701 cgcacatgat tccaacgctc agggttcgta ccctggctcg ctgaccgttg atgccgaagc
     2761 ctgtcggctg acggccccgc cgccgttcgt tgctcatgcc acaacttgaa taggatacgc
     2821 tagagatgag gctccaaact ctctccgtca agcggatccg ccggccggct tcggcatcgt
     2881 tacagtgttg tgtcatctcg cctactccat ggtcttggag aagcgtttca cactcacggt
     2941 caccaacagc agcgcaaaca gggtcagcac cagcgcgggc tgccacacat cgaacaaccc
     3001 gacatccttg agcgcgattc cccgcacgat tccgatgtag taggtcatcg gaagcagcag
     3061 ccccagctcc cggatgacga ggggcatcgc ttcgcggggg aacatgaagc cggtgagcag
     3121 gatgctcggc agcatataga agatgctgag ctgcatggcc tgggtttggg tcttgaccgc
     3181 agtggagatc aaaagaccga ccccgaggac ggcaacgatg aaagggaaag tgatgccgta
     3241 cagcagaagc aggctgcccc ggagtggtac gctcagggca aagtgtccca gcgccaggat
     3301 cacggtcatc tgcacgtggc cgacgatcac gaacggcaga atcttgtcga ggatgacgct
     3361 ggagcgcgcc accggtgtga cgatcaactg ctccagcgtg ccgcgctccc gctcccgcac
     3421 cagcgccatg gcggtgatcg ccaccagggt catggtgagc aggacgccaa ttagtccagg
     3481 gacgatgttg aacgcgctca ccagaccggg gttgtagcgg ggacggactc gcacctcgag
     3541 cggcggctgg ggagcaggct ctccgcgggt gagcgccaga ag
//
LOCUS       DASRPQ010000269         3621 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4416792, whole genome shotgun sequence.
ACCESSION   DASRPQ010000269 DASRPQ010000000
VERSION     DASRPQ010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3621
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4416792"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..532)
                     /locus_tag="VFD73_03120"
     CDS             complement(<1..532)
                     /locus_tag="VFD73_03120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73009.1"
                     /translation="MASATCCIASLLCAQTNDLKQAGLWQLQGLRSSYCVHFLVNPEA
                     GSKELKQGLTAIRASEDATLNPALQQVVHSQPEFAGWTPSNLCLYYLDAVQVGKQRIV
                     ERDPRRYQLIGVWTLAAREAGGARRDFVVDMYASRENLLDAAHVAEVRLHEMESAYYD
                     HPDTTDDTYNLKIGKTQ"
     gene            complement(585..1172)
                     /locus_tag="VFD73_03125"
     CDS             complement(585..1172)
                     /locus_tag="VFD73_03125"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HZI73010.1"
                     /translation="MRLSRTMISLATSLVIGVPVLAAQGNEGKVKAVLQSGPDVGRRA
                     PDFSLPWASKDSVGPIESPYQLASDRGKTVVIAFYPRDFTQSSTAEMRTLAQQYDSLA
                     GPDVVLVAISTDSVSTHRRFAQSLNLPFRLLSDPDQRISKQYASKDPNGYNRRTVYVV
                     GSDGRVAFRNLQFNALDPKDYAELRNAVKNSLRPS"
     gene            complement(1196..1693)
                     /locus_tag="VFD73_03130"
     CDS             complement(1196..1693)
                     /locus_tag="VFD73_03130"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HZI73011.1"
                     /translation="MKFWLILGALTGLLLAGPVHAQESGIPVGSRAPAVQVNDLNGHP
                     VSLSSYIGKKPVFLEFWATWCELCEQLLPKVRQAVAQYGNQVEFLGVNVTVNQTPAKV
                     QRYLDKNKPGFQTLYDDQGSSIRAYQVPSTSYVVIVDRTGKVVYTGTGGTQNFDTVLR
                     RVTRG"
     gene            complement(1690..2391)
                     /locus_tag="VFD73_03135"
     CDS             complement(1690..2391)
                     /locus_tag="VFD73_03135"
                     /inference="COORDINATES: protein motif:HMM:NF014713.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HZI73012.1"
                     /translation="MTGLEAALKERPLAAAAALFVAGLATSLTPCVYPMIPITAGILG
                     GAGASTAGPRRRTVLLTLSYVLGLALVYSLLGLLAGLTGSIFGTVSSSPWALFIMGNF
                     LLVFGLGLLDVFTIGVPARVTSWISGIDAGSIPGVFLLGATSGLVAAPCGAPAFAAVL
                     TFVSTTGSAWLGFFYLFVFSLGLTALLVVVGLVSGGLGALPRSGAWTGVVKRIGGVLL
                     IAAAEYYFIRMGSVL"
     gene            complement(2388..>3621)
                     /gene="ispG"
                     /locus_tag="VFD73_03140"
                     /gene_synonym="gcpE"
     CDS             complement(2388..>3621)
                     /gene="ispG"
                     /locus_tag="VFD73_03140"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HZI73013.1"
                     /translation="VASRRRTVSTLIGGGAVGSAHPIVVQSMTNTDTADITGTTMQIT
                     ELAAAGSELVRVTVNNEESAAAVPVIVERLAAAGVMVPIVGDFHYNGHLLLTKYPACA
                     RALAKYRINPGNVGAKRRDENFRAIIDVALVNDKPVRIGVNWGSLDQSLLTAMMDSNA
                     RRASPRDTRLVVIDAMVESALQSAALAEATGLGHDRIVLSAKVSGVQDLIDVYRLLAS
                     RCDYPLHLGLTEAGMGAKGIIASTAGLSVLLQEGIGDTIRVSLTPEPGGDRTEEVRVA
                     QQILQSLGLRSFTPQVTACPGCGRTTSTFFQQMALEIQNYLQQRMPLWRGEYPGVEDL
                     KVAVMGCVVNGPGESKHANIGISLPGTFEEPKAPVYVDGRLLITLRGDNIVPEFLGIL
                     EDYVASRYGGAAAPVGRY"
BASE COUNT          742 a         1109 c         1071 g          699 t
ORIGIN      
        1 gctgagtctt tccaatcttg agattgtagg tgtcgtctgt ggtatcgggg tggtcgtagt
       61 atgctgattc catttcatgc aagcgtacct cagcgacatg ggctgcgtcg agcagatttt
      121 cccggctggc atacatgtca accacgaaat cacgacgggc gcccccagct tctcgtgcag
      181 ccagggtcca aaccccgatc aactggtagc gccggggatc ccgctcaacg atgcgctgct
      241 ttccgacttg aacagcgtcc aggtagtaca ggcagaggtt cgatggagtc cagccggcaa
      301 attcgggttg ggaatgcacc acctgctgaa gcgccggatt gagggtcgca tcttccgagg
      361 ctcggattgc tgtaagaccc tgcttcagct ccttggaccc ggcctcgggg ttcaccagaa
      421 agtggacaca atagctgctg cgcagaccct gcagctgcca aagaccggct tgcttgaggt
      481 cgttggtttg ggcgcagagc agcgaggcaa tgcagcaggt tgccgatgcc accccaagcg
      541 ttagacgcgg tttgataaag cttcctggcg ctagtggtac tctgtcagct cgggcgcagg
      601 ctgtttttga ctgcgttccg aagctccgca taatctttgg gatcgagcgc gttgaactgc
      661 aggttgcgga aggctactcg gccatcggaa cccacaacgt agaccgtgcg ccggttgtac
      721 ccattcggat ctttgctggc gtactgcttg gatattcgct ggtccggatc gctgagcagg
      781 cggaaaggaa gattcaaact ctgggcgaac cggcgatgag tggagaccga gtccgtgctg
      841 atcgccacca ggacaacgtc gggaccggcc aggctgtcat attgctgagc caaggtccgc
      901 atttcagcgg tggagctctg ggtgaaatcc ctgggataaa aggctatcac caccgtcttg
      961 ccgcgatcac tggcaagctg atagggagac tcgatggggc caacgctgtc cttgcttgcc
     1021 cagggaagcg aaaagtccgg agctcggcgg ccgacatcag gcccactttg cagaacggct
     1081 ttgactttcc cttcattgcc ctgtgccgcg aggacaggca caccgatcac cagtgacgtt
     1141 gccagggaaa tcatcgtgcg agaaagacgc atgtgaactc ctgatgatat agcgatcaac
     1201 ctcgggtgac ccggcgcagc acagtatcga agttctgcgt gccgccggtt ccggtgtata
     1261 ccactttccc ggtccggtcc acgataacca cataggacgt ggagggaacc tggtatgccc
     1321 tgatgctgct cccctgatca tcgtacagcg tctgaaagcc gggtttgttc ttgtccaggt
     1381 accgctgaac ctttgccggt gtctggttga cggtgacatt cacacccagg aattcgacct
     1441 ggttgccgta ttgggccact gcctgccgaa ccttcggaag caattgctcg cagagctcgc
     1501 accaggtcgc ccagaactcc agaaacacgg gcttctttcc gatgtaggaa ctgagcgaaa
     1561 ccggatgccc gttgagatcg ttcacctgaa ctgcaggcgc ccggctcccg accggtatcc
     1621 ccgattcctg cgcgtggacc gggcccgcaa gaaggagacc agtcagagct cccagtatta
     1681 accagaattt cataagacac ttcccattct gatgaagtag tactcggccg ctgcgatcag
     1741 cagcactcct ccgattcgct tgaccactcc ggtccaggcg cccgatcggg gcagcgcgcc
     1801 gagtcccccg cttaccagac ccaccacgac gagcaacgcg gtcaaaccca gagagaatac
     1861 gaacaagtaa aaaaatccaa gccatgcgct gcctgtcgta ctgacaaagg tcagcaccgc
     1921 agcgaaggcc ggcgccccac aaggagctgc caccaatccc gaagtggcgc cgagtaagaa
     1981 cacgccgggg atggaaccgg cgtcgatccc ggaaatccag ctggtcaccc gtgctggaac
     2041 gccgatggta aagacgtcca gaagccccag tccgaacacg aggaggaaat ttcccatgat
     2101 gaacagggcc catggactcg agctaacggt gccgaagatg ctcccggtga gtcctgccag
     2161 gaggcccagc agggagtaga ccaaggcgag tcccaggacg tagctcaacg tcagcaacac
     2221 cgttcgacgc cgagggccgg cagtgcttgc ccctgccccg cccagaatcc cggcggtgat
     2281 cggaatcatg gggtagacgc agggggtgag gctggtggcg agacccgcga cgaagagcgc
     2341 tgcggccgct gccaagggcc gttctttgag ggcggcttcc agaccggtca atatcgtccc
     2401 accggagccg ccgctccccc ataccggctg gcgacatagt cctcgaggat gcccaggaat
     2461 tcaggaacga tattgtcgcc gcgaagggtg atcagcagtc ggccatctac atacaccgga
     2521 gccttgggct cctcgaacgt gccaggaagc gaaatgccga tgttggcgtg cttcgactct
     2581 ccaggaccat tcactacgca ccccatgacc gcgaccttca ggtcttcgac cccagggtac
     2641 tcgccccgcc agagcggcat tcgttgctgc aggtagttct gtatttccag agccatttgc
     2701 tgaaagaacg tactggtggt tcggccacac cccggacagg ccgtcacctg gggcgtgaag
     2761 ctacgcagcc cgagggactg cagaatctgc tgggcaaccc gaacttcttc ggtacggtcg
     2821 ccgccgggct ccggcgtaag cgacactcga atggtgtcgc cgatgccctc ctgcagcaga
     2881 acgctcagac ctgccgtact cgcaataatc cctttggcgc ccattcccgc ttccgttaac
     2941 ccgaggtgca gcgggtagtc gcagcgcgac gcaagcaggc ggtacacgtc gatcaggtcc
     3001 tgaacacctg acactttggc gctcagcacg atacgatcgt gtccgagtcc agtggcctcc
     3061 gccagtgccg cagactgcag cgcgctttca accatggcat cgatcacgac caggcgcgta
     3121 tctcgagggc tggcccggcg ggcgttgctg tccatcatgg cggtcaagag actctggtcc
     3181 agcgagcccc agttgactcc aatgcggact ggtttgtcgt tgaccagtgc cacgtcgatg
     3241 atggcgcgga agttttcgtc gcgccgtttc gcaccgacgt tgccgggatt gatccggtat
     3301 ttcgcgagcg cccgcgcaca ggcgggatat ttggtgagca gcaggtgccc gttgtagtga
     3361 aagtcgccga cgatggggac catcactccc gccgctgcta atcgctccac gatcactggc
     3421 accgcggcag ccgattcttc gttgttcacc gtgactctga ccagttcgct tccagcggcc
     3481 gccagctcag tgatctgcat ggtcgtgccg gtgatatccg cagtatcggt gttggtcatc
     3541 gactgaacca cgatcggatg cgccgaccca acggcacccc ccccgatcaa cgtggataca
     3601 gtacgtctcc ggctggcaac t
//
LOCUS       DASRPQ010000270         1375 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_345130, whole genome shotgun sequence.
ACCESSION   DASRPQ010000270 DASRPQ010000000
VERSION     DASRPQ010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1375
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_345130"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            380..>1375
                     /gene="speA"
                     /locus_tag="VFD73_03145"
     CDS             380..>1375
                     /gene="speA"
                     /locus_tag="VFD73_03145"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF003763.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008792 - arginine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HZI73014.1"
                     /translation="MEHTPGTSRAGALGQGPGSILLARPLHFSPSTARSRAIASTVVA
                     PPSWTIKDAEKLYNMSGWGQGYFRVSPDGHVTVHPDANRKRGLDLYQLAMDLNAQGVG
                     LPLLLRFSDILRSRIQSLASEFASAIKEFGYEGSYTTVYPVKVNQQRHVVQEIVEFGA
                     PHGVGLECGSKPELQAILGLNESTNHLIVCNGYKDEEFMRLALMGQRLGHTVMIVLEQ
                     LNELEVLLKVADEMGVQPTAGVRVKLATEGSGRWAKSGGERSKFGLGAVELMRLLDQL
                     ERLGRKDILKLVHFHLGSQITDIRFVKAGLEEIGRYYAELRGMGYDISHVDVGGGL"
BASE COUNT          255 a          425 c          479 g          216 t
ORIGIN      
        1 atccggccgc gcaggcgccg gacgaatgcc acggcctggg tgcgataggt atcggcgagc
       61 gactcgaacg ccttggcgaa caagacctga agccgcaggc gcagcgggtg cgagaatcga
      121 cgagcgacaa tcagactggg cgcagccatg gtgcacctct cttcgcgtga ggcagtgcag
      181 aatctgagac ggaatcgtgt cgagtgatgc gacggctaaa aatgcgagga tcgtgcccga
      241 ccagggcgcg atgtgagtct gggctcgcaa tggtatcttg ttgtcgatga accgattgta
      301 agccgtgcga ggggctgcac gggtaggcgg aacggccctc tgtggcgcgc ccgctactgc
      361 ctccgagaaa ccctgtaggg tggagcacac ccccggaacc tcccgggccg gagcgctcgg
      421 ccaggggccc ggaagcattc tcctcgcgag gccattacat ttttcgcctt ccacggccag
      481 gagtcgcgcc atcgccagca cagtcgtcgc cccgccgagc tggaccatca aggacgccga
      541 gaagctctac aacatgagcg gctggggcca aggctacttc cgggtgagcc cggacgggca
      601 cgtcaccgtg catcccgacg ccaaccggaa acgcgggctc gatctgtacc agctcgcgat
      661 ggacctgaac gcccagggtg tcggactgcc gctcctgctt cggttcagcg atatcctgcg
      721 ctcccgcatc cagtcgctcg cctccgagtt cgccagcgcc atcaaggagt tcggctacga
      781 gggcagctac acgacggtct atccggtgaa ggtgaaccag cagcgccacg tggtgcagga
      841 gatcgtcgag ttcggcgccc cgcacggggt cgggctcgag tgcggcagca agcccgagct
      901 ccaggcgatc ctcggcctga atgagagcac caaccacctg atcgtctgca acgggtacaa
      961 ggacgaggag ttcatgcggc tggcgctgat gggccagcgg ctgggccaca ccgtgatgat
     1021 cgtgctggag cagctgaacg agctcgaggt gctgctcaag gtggccgacg agatgggcgt
     1081 gcagccgacg gccggcgtgc gggtcaagct cgcgaccgag gggtccggac gctgggccaa
     1141 gagcgggggt gagcgctcca agttcgggct gggcgcggtc gagctcatgc gcctgctgga
     1201 ccagctcgag cgcctgggcc gcaaggacat cctcaagctg gtgcacttcc atctgggcag
     1261 ccagatcacc gacatccgct tcgtgaaagc cgggctggag gagatcggcc gctattacgc
     1321 cgagctgcgc gggatggggt acgacatctc tcatgtggac gtgggcggtg gcctg
//
LOCUS       DASRPQ010000271         1178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1282495, whole genome shotgun sequence.
ACCESSION   DASRPQ010000271 DASRPQ010000000
VERSION     DASRPQ010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1282495"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..998
                     /locus_tag="VFD73_03150"
     CDS             <1..998
                     /locus_tag="VFD73_03150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HZI73015.1"
                     /translation="DGIFTQSGLGIVTQMTIALSRRPDAIKIFLFGLKRSEKLGDLVE
                     LVREVNARFPGIVGGINLMNAHRMLAMAAPYPHERLGPDGLISPEVLAELSHQNQVMP
                     WTGFGTLYGSKEVVRAVQRDVRRLLRPLVSRLVFISPEGGRMLARAGGLLPGYFRSKF
                     ARKLEMLERSLQLVAGRPNETALPLCYWNTRKQPRAGVAMDPARDGCGVAWYSPLVPM
                     KPESVAAYVQMVTAIMRKHRLEPLITLTSLSDRCFDSTVPLLFDLDSEESRRNAETCY
                     WALLEAGRGQGFLPYRVGIQTMSWLSRNDTTFWQVVREIKKTLDPHGIISPGRYI"
BASE COUNT          209 a          356 c          379 g          234 t
ORIGIN      
        1 tggacgggat cttcacgcag agcggcttgg gcatcgtgac gcagatgacc atcgctctct
       61 cccgtcgccc cgatgccatc aagatctttc tcttcggctt gaagcggtcc gagaaactcg
      121 gggacttggt ggagctggtg cgcgaggtga acgcccgatt cccggggatc gttggcggca
      181 tcaacctgat gaatgcgcat cgaatgctgg ccatggcggc gccctatccg cacgagcgac
      241 tgggtcccga tggtctcatc tctccggaag tgctggccga gctcagccac cagaatcaag
      301 tgatgccctg gacgggcttc ggcacgctgt acggctcaaa ggaagtagtg agggccgtgc
      361 agcgtgacgt ccgccgtctc ttacgacccc tggtgtctcg gctggtattc atcagcccgg
      421 agggcggacg gatgttggct cgcgctggag gtctgttgcc aggctatttt cgttcgaagt
      481 tcgcccggaa gctggagatg ctcgaaaggt ccctgcagct cgtcgcgggg cggccgaatg
      541 aaaccgctct gcccctgtgc tattggaaca ctcgcaagca acctcgtgct ggtgtcgcca
      601 tggatccggc ccgagacggc tgcggcgtgg cgtggtattc accgctcgtg cccatgaagc
      661 cggagagcgt tgccgcctac gtgcaaatgg tcaccgccat catgcgaaaa catcggctcg
      721 agcccctaat cactttgacc agcctgtccg accggtgctt tgacagcacc gtgccattgc
      781 tgttcgacct ggattcggag gagagccgga ggaatgccga gacctgttac tgggcgctcc
      841 tggaggcggg gcgcggccag ggcttccttc cgtaccgggt gggcattcag acgatgagct
      901 ggctgtcccg gaatgacacg acgttctggc aagtcgtccg ggagatcaaa aagacgctgg
      961 acccccacgg gatcatctct ccgggaaggt atatttgatc tcggccgtcc tcacttgccg
     1021 agttctcgga gaatcgaaca tctatgagcc ggctacggtg gtcgccaccg gctgcccgcc
     1081 gcgcataaac gcctgctgag cgcagcgact cttcgactat gccattgcga gaccaggcag
     1141 ctcgcgcggg cgacgaggat tcgagcggtc cggcgcgt
//
LOCUS       DASRPQ010000272         3671 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_656407, whole genome shotgun sequence.
ACCESSION   DASRPQ010000272 DASRPQ010000000
VERSION     DASRPQ010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3671
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_656407"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(186..2531)
                     /locus_tag="VFD73_03155"
     CDS             complement(186..2531)
                     /locus_tag="VFD73_03155"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HZI73016.1"
                     /translation="MTHLIHLWLWLATISAPTLPSSIAADTGDVRTVLDSTLAQAGEA
                     LARGRPWQATRLLSAALHDSASRTPAAVFLAATAASEWGGWNEVRQLLEGERWLDTLY
                     DGRGRLLLARAEVEQHADSAALEHASIALRGDPQSGERLMLLAVVLERVGARDSAAMV
                     YQRAADQLPQVADWLRLRAAGVTADSSARARLYSQIRDSLPRSRIPWTEAAAYEHIGD
                     ITEAARRYTELGERLTSLRLRLAQSADSASRADVRREMLALLAGRVSSAAARQAIGVL
                     DSAFASLTPAEELQVARAAADCGLPFRAAGGFAKVGSKRLGSGQDRFAYAGVLTRLKR
                     NAEAAQQFKLVHSPKSLAALAAYQGARALVRDGQIKAGRRALTRVTRSYARDTTAAAS
                     AYFLLADLASDDRAEGEARRLYRVVAQRYPTSRFAPTARFRAAMIALLSGSSQQAAEE
                     FDALGQRYSSSDESLGATYWAGRSWAQAGDSAKARDRWQRVTSRDPLSYYAALSANRL
                     GTRPWTPPAAPDSFPSDPDVAGVVSRAALLSRLGMAQESRWELERLTKAPETSPERLL
                     VLANAFRSQGMAGQAIQLARRALAEGAPADARTFRLIYPVIHADALLAEAAEQGVDPS
                     FVAAVIRQESSFNPGATSPAGARGLAQVMPEVGERLARALNYPVWDPVLLYQPDVSIQ
                     LGAFHLRELLSQYDQRARILAAYNAGAPRVERWAKRIGVDDPEVFAEQISFVETRDYV
                     RVIQRNEDIYRALYGTEVSSEVPVPAGPQEGPVVPSDDQQM"
     gene            2664..3059
                     /locus_tag="VFD73_03160"
     CDS             2664..3059
                     /locus_tag="VFD73_03160"
                     /inference="COORDINATES: protein motif:HMM:NF013633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HZI73017.1"
                     /translation="MAETDDRTRLDKWLWAARFYKTRSMAAEAIAGGKVQVNGDRVKR
                     AKPLQINDEIRIRQGPYEYQIVVRGLSERRGPASEAVTLYDEKPESRAAREALALQLK
                     TLHAAFIPDRGRPTKKDRREINRLKGRDR"
     gene            complement(3077..>3671)
                     /locus_tag="VFD73_03165"
     CDS             complement(3077..>3671)
                     /locus_tag="VFD73_03165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012536130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HZI73018.1"
                     /translation="AVAQGYASVTLVHKGNIMKYTEGGFRDWGYAVAREEFGATEIDG
                     GPWSRLPNGLIIKDVIADAFLQQILTRPKEYGVIATMNLNGDYISDALAAQVGGIGIA
                     PGANINYLTGHAVFEATHGTAPKYAGQDKVNPGSVILSGEMMFRYLGWQEAADLIISS
                     LEKTIGQKRVTYDFERLMSGATLLSTSEFGRAMVENM"
BASE COUNT          717 a         1148 c         1204 g          602 t
ORIGIN      
        1 atgcgggaga gaactcgctc ggcttggcga ttgagatagg cgaagcgcca ctcaggatcg
       61 agggcaaaga tcccttcgcc aatatgctcg agcagatcca gcggttgagt ggtattgagc
      121 aaccgattca accttcgact ggaggaggca gctgcaaact aagagcagga gcccccagtg
      181 ccaagctaca tctgctgatc gtctgagggg acgaccggac cctcctgggg tccggccggg
      241 accggtacct cactactgac ttcagtgccg tacaaggccc ggtagatgtc ctcgtttcgc
      301 tgaatcaccc gaacgtaatc ccgagtctcg acgaatgaga tctgctcggc aaacacctcc
      361 gggtcatcca ccccgatacg ttttgcccag cgctcgaccc ggggagctcc ggcgttgtac
      421 gcggccaaga tgcgagcacg ctgatcgtac tggctcagca gctcacggag atggaaggcg
      481 ccgagctgaa tgctcacgtc gggttgatag agcagcacag gatcccatac cgggtagttg
      541 agcgcccggg ccagacgttc gccgacctcc ggcatgacct gggccaggcc acgggcaccg
      601 gcgggtgagg tggctccagg attgaagctg gattcctgcc tgatgacggc cgccacaaag
      661 ctgggatcga cgccctgctc cgccgcctcg gccagcaacg catctgcgtg gatcacagga
      721 tagatcagcc ggaaggttcg ggcatcggct ggtgctccct ctgccagcgc acgacgggcc
      781 aactggatcg cctggccggc cataccctgg ctgcggaacg cgttggccag caccaagagg
      841 cgctcgggag aagtctccgg ggctttggtg agccgctcca attcccagcg tgattcctgg
      901 gccatgccca ggcgggagag caacgccgcg cgggacacaa cgcccgccac atctggatcg
      961 gagggaaagg aatcaggggc cgcgggaggc gtccacgggc gagtgcccag ccgattcgca
     1021 ctgagcgccg cgtagtagga gaggggatca cgggaagtga cccgctgcca gcggtctctg
     1081 gcctttgcgc tgtcaccggc ctgggcccag gaacggcccg cccaataggt cgctccaaga
     1141 ctctcgtcgc tgctgctgta acgttggccg agggcatcga actcttccgc cgcttgctgc
     1201 gagcttccgc tcaagagcgc aatcattgcg gcgcggaacc gggcagtcgg ggcaaagcgg
     1261 ctggtgggat agcgctgggc caccactcga tacaatcggc gtgcctcgcc ttcggctcgg
     1321 tcgtccgagg cgagatccgc cagcagaaaa taggcggacg cggcagcagt cgtgtcgcgg
     1381 gcataactcc gggtaacccg cgtcagcgcc ctgcgcccag ccttgatctg cccgtcgcga
     1441 accagtgccc gggcgccctg gtatgcagcc aaggcggcca acgacttcgg ggagtggacg
     1501 agcttgaact gctgggctgc ctcagcgttc cgcttgagcc tggtgagcac accggcatat
     1561 gcgaatcggt cctggcctga gcccaggcgc ttcgatccca ctttggcaaa gccgccagcg
     1621 gcgcggaagg gcaacccgca atcagcggcc gcgcgggcga cttgcaactc ttcggcgggt
     1681 gtgagcgagg caaacgcact gtccagcaca ccaatagcct ggcgagctgc ggccgacgag
     1741 acccggccag ccagcaacgc aagcatctcg cggcgaacgt ctgcccgaga cgcgctatcg
     1801 gcactttgcg ccagccggag gcgcaggctg gtcaaacgct cgcccagctc ggtatatcgc
     1861 cgagctgcct cggtgatgtc accgatatgc tcgtaggcgg ctgcctcggt ccagggtatc
     1921 cgcgagcgcg gcagggaatc tcggatctgc gaatagagtc gggctcgagc gctgctgtca
     1981 gcggtcacac cagctgcgcg gagccgcagc cagtcggcca cctggggcag ttggtccgcg
     2041 gctctctgat ataccatcgc cgcgctgtcc cgcgctccca ctcgctcgag tacaacggcg
     2101 aggagcatga ggcgttcgcc ggactgcgga tcgccgcgca gagcaatgga ggcatgctcc
     2161 aacgcggcgg aatcggcatg ctgctcgact tccgcacggg ccagcaggag ccgcccgcga
     2221 ccgtcgtaca gggtatcgag ccagcgctca ccttcgagga gttgccggac ttcgttccat
     2281 cctccccatt cgctcgcggc ggtcgcggcc aggaataccg cagccggcgt tcggctggct
     2341 gagtcgtgga gcgccgccga aagcagccga gttgcttgcc agggccggcc ccgcgcgagc
     2401 gcctcaccgg cctgagccaa ggtcgagtcg agaacggtgc gaacgtcacc ggtatccgcc
     2461 gcaatactgg atggcagagt cggagcgctg atcgtggcca gccacagcca gaggtgaatc
     2521 agatgagtca cggcgaggtc accagttcag agagatgaac ccaggatcac cctgcaaatg
     2581 ccgcgccgtc ggagacttag ctcctgaggg cactgatacc tgtgggaggg acggattctg
     2641 cgccagaatc gttactttgc accatggcgg agactgacga ccgaacccga ctggacaagt
     2701 ggctttgggc tgctcgcttc tacaagaccc gctcgatggc ggccgaggcg atcgcgggag
     2761 gcaaggtgca ggtcaacggg gaccgggtga agcgggcaaa gccgctgcag atcaatgacg
     2821 aaatacgaat tcggcaggga ccctacgagt atcagatcgt ggtcagagga ctcagtgagc
     2881 ggcgaggacc ggcaagtgaa gcagtgaccc tctacgacga aaagccggag agtcgagcgg
     2941 cgcgggaagc gctcgcgcta cagctcaaga cgctgcacgc cgccttcatt cccgatcgag
     3001 gacggccgac caaaaaggac cgaagggaga tcaaccggct gaaggggcgg gacagatgag
     3061 gagtaagcgg tgactctcac atgttctcca ccatggcccg accaaactcg ctggtagaaa
     3121 ggagcgtggc acccgacatc aaacgctcga aatcgtaggt cacccgcttc tgtccgatgg
     3181 tcttctccag tgacgatatg atcaggtccg cggcttcttg ccatcccaga tatcggaaca
     3241 tcatctcgcc ggagagaatg acggatccgg gattcacctt gtcctggccg gcatatttgg
     3301 gagcggtgcc gtgagtggcc tcgaagacgg cgtggccggt tagatagttg atattggctc
     3361 cgggagcgat gccgatgccc ccgacctgcg cggcaagcgc atcggagatg tagtcgccgt
     3421 tcaggttcat cgtcgcaatg acgccgtact ccttgggtcg ggtaagaatc tgctgcagga
     3481 acgcgtcggc gatgacgtcc ttgatgatga gaccgttggg gagtcgggac caggggccgc
     3541 catcgatctc ggttgcgcca aactcctccc gggccaccgc gtagccccaa tcgcggaagc
     3601 ctccctcggt gtacttcatg atgttgccct tgtgcaccag cgtgacgctg gcatagccct
     3661 gggccaccgc a
//
LOCUS       DASRPQ010000273         1003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2222588, whole genome shotgun sequence.
ACCESSION   DASRPQ010000273 DASRPQ010000000
VERSION     DASRPQ010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2222588"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..543)
                     /locus_tag="VFD73_03170"
     CDS             complement(<1..543)
                     /locus_tag="VFD73_03170"
                     /inference="COORDINATES: protein motif:HMM:NF013698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI73019.1"
                     /translation="MANGLHPAMKSQKRRAAKSKVTQPVAPLQPDAAGLDIGSSELWV
                     AVPPERSDESVRCFGTFTADLAALVGHLKACGIRSVAMESTGLYWIPVYQVLADAGFE
                     VCLVNARHVKHVPGRKSDVRDCQWLQYLHSVGLLRGSYRPTQAVCAARSVYRYRQNLV
                     SQSAQQVQHIQGALDQMNLKL"
BASE COUNT          187 a          330 c          312 g          174 t
ORIGIN      
        1 cagcttcagg ttcatctggt ccagggcccc ttggatgtgc tggacctgct gcgcactttg
       61 gctcaccagg ttctggcggt agcgatacac cgagcgggcc gcgcagacgg cctgggtcgg
      121 ccgataggag ccccgcaaca gccccacgct gtgcaggtac tgcaaccatt ggcaatcgcg
      181 cacgtcgctt ttgcgcccgg gcacatgttt gacgtgccgg gcgttgacca agcagacctc
      241 aaagcccgcg tcggccaaca cctggtagac cgggatccag tacaggccgg tggactccat
      301 ggccaccgaa cggatgccgc aggcttttaa gtgccccacc agggcggcta aatcggccgt
      361 aaaggtgccg aagcagcgga ccgattcatc actgcgctcg ggcggcacgg ccacccacag
      421 ctcgcttgag ccgatatcga ggccggccgc atcgggttgc aggggcgcta cgggctgggt
      481 gactttggac ttggcggcac ggcgcttttg gcttttcatg gcggggtgga gtccgttggc
      541 cacggcgggg gcggggctcc gacggcgaac aaacgaggca atctcataga cggggtctgg
      601 gccgcaacca ggttgcgggc ccgccaccac tgacaaagcc gcacgtcgga ttccatgctg
      661 tgaggcgggc ttagcgacac ctaagcacca ctgaactggc ggagtacagg cctcgcctcc
      721 ccgtggttgg ctgccttata gcccaaacgc acggccttgc caactcaccc ctgttcccac
      781 ccttacaaac acccgccccg ccgggttgga tttgctgtga ggggctcggg gtgaaagtcc
      841 ccgggcctac tcggcatctg gaaacggagc caacaggcca ccgcgccaga tctcgactct
      901 acccagagcc cattctatcg ccccgccatt catgcaccaa cgcgctacgg acccggtaaa
      961 tccagaaagg tcttgcggta tcgctcgctt ggaaagtaca gct
//
LOCUS       DASRPQ010000274         3879 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_656704, whole genome shotgun sequence.
ACCESSION   DASRPQ010000274 DASRPQ010000000
VERSION     DASRPQ010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3879
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_656704"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..507
                     /locus_tag="VFD73_03175"
     CDS             <1..507
                     /locus_tag="VFD73_03175"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI73020.1"
                     /translation="PDREARVEEFFLAAAAALPEKRFLLGGSGWGDKHLPANVHYVGH
                     VYTKHHNAFNCSPMAVLNVNRESMARYGFSPPTRVFEAAGAGACLITDDWVGIELFLE
                     PQREVIVARSGADVAERLGHLSHREARQMGLAAQRRILAQHTYSHRAAQVEALLDATR
                     PTAGGIAG"
     gene            504..1592
                     /locus_tag="VFD73_03180"
     CDS             504..1592
                     /locus_tag="VFD73_03180"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI73021.1"
                     /translation="MTAPRLRIVILGLSITSSWGNGHATTYRGLVRELTRRGHDVLFL
                     ERDVPWYASNRDLPRPPHGRTALYLDLEELKRRFVDEVQDADLVIVGSYVPEGVEVGR
                     WVTQTAQGVTAFYDIDTPVTLAKLARGDEEYLSPELIQEYQLYLSFTGGPILERLERD
                     YGSPMARALYCSVDPEVYYPEALPVRWDLGYMGTYSDDRQPGLKRLLITPATTWPEGR
                     FVVAGPQYPKTLRWPPNVQRIQHLPPKRHRGFYNAQHFTLNLTRADMVAAGYSPSVRL
                     FEAAACSTPIISDHWDGLETLFEPGREILIATTSRQVVEWLCDMPEPERKKLGARARH
                     RVLAEHTAAHRAAELEGYALTLLSRQLS"
     gene            1619..2398
                     /locus_tag="VFD73_03185"
     CDS             1619..2398
                     /locus_tag="VFD73_03185"
                     /inference="COORDINATES: protein motif:HMM:TIGR04290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04290 family methyltransferase"
                     /protein_id="HZI73022.1"
                     /translation="MKSRHERLEEIAALAPWFHNLHLPDGTETAPSHFLGDFPRYKWQ
                     ALAPHLPKRLDGWTALDIGCNAGYYAFELARRGARVTGIDVDPHYLRQAEWAARELGV
                     EKDIEFREMQVYDLAAEDEKFDLVLFMGVFYHLRYPLLGLDIVARRTRRLMVFQTLTV
                     PGMEVYTNTWDRPIHDRDALRDPVWPRMAFIEHRFASDPTNWWVPNHAGVEAMLRSSG
                     MNVRAHLGHEIYLCEPSPPGAPTRAPYDFSAELRSATGRSR"
     gene            2414..>3879
                     /locus_tag="VFD73_03190"
     CDS             2414..>3879
                     /locus_tag="VFD73_03190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73023.1"
                     /translation="MIIYRDQRSAADTRTLLARARSTLDELSATSSHQQLVEILIALG
                     TLESALSDALFPEVEAVHPTIDLLRQASVAAGHMLWHSWHGRPHLIDRWAGLASRALS
                     QAGGHVLPKQVEISVPEGYAYYGVYPEMYLEAAKSFAQPLQRSSAVCLGLRSIGSSLS
                     AVVAAALEELGWNVQSWTLRPRGHPFERTPRLAAELDQKFRSTTDTRFLVIDEGPGIS
                     GSSFVGTGAMLRELGIPQDRITLFPSWRTEGGQLRSPAARDQWSSYEQVVTTFESVWL
                     ESGRLTQAFPGALTDLSAGSWRQLVFQSSACFPPVQPQHERRKYLLRPTERTSAAQQP
                     LLLKFAGLGSQARANVLRGKALAQAGFSPAPVDLCHGFMATPFVEGKPVPMGHTSGEF
                     LQRVAQYLAHLACANRAEPTVADAELREMTAVNLNEAMDSEEFRRLERLLPRKWTEWP
                     VALDARMQPHEWLQTPTGYVKTDAIDHHRDHFFPGCQD"
BASE COUNT          740 a         1206 c         1205 g          728 t
ORIGIN      
        1 cccgacagag aggcccgggt agaggagttc ttcctggccg ctgcagccgc attgccggag
       61 aagcgcttct tgttaggcgg gagtgggtgg ggagacaagc acctgcctgc caacgttcac
      121 tatgtggggc acgtgtatac caagcaccac aacgcgttca attgcagccc aatggccgtg
      181 ctgaacgtga atcgcgagag catggcgcgc tacggcttct cccctccgac tcgagtgttc
      241 gaggccgccg gtgccggcgc ctgcctcatc accgatgatt gggtgggcat cgagttgttc
      301 ctggaaccgc aacgggaagt gattgtcgcc cgctcgggtg ccgacgtcgc cgaacgactc
      361 ggtcacctga gtcatcgtga ggcaaggcag atgggccttg cggcgcagcg gcgaattctg
      421 gcgcagcaca cctacagcca ccgggcggct caggtcgaag cgttgctcga tgccacccgg
      481 ccgacagcgg gaggcatcgc cggatgacgg caccacgtct ccgcattgtc atcctcggcc
      541 tgtcgatcac ctcctcctgg ggaaacggcc acgcgacaac gtatcgtggt ctggtccgcg
      601 agctcacgcg tcgagggcac gacgtgctct ttctcgaacg tgacgtgccc tggtatgcct
      661 cgaatcgcga tcttcctcgt ccaccgcacg gacggaccgc gttgtatctc gacctggagg
      721 agttgaagcg gcgtttcgtc gacgaggtcc aggacgccga tctcgtgatc gtgggctcgt
      781 atgtccctga aggcgtggag gtcgggcgct gggtaacgca aactgcgcaa ggggtgaccg
      841 cgttctacga catcgacacg ccagtcaccc tggccaagct ggcgcgggga gacgaggagt
      901 accttagtcc ggagctgatt caggagtatc agctctacct ctcctttact ggtggaccga
      961 ttctcgagcg cctggaacgg gactacgggt ctcccatggc tcgggcactg tactgttcgg
     1021 tcgatccgga ggtgtattac ccggaagcgc tgcccgtcag gtgggatctg ggatacatgg
     1081 ggacatacag cgacgaccgg cagccggggc taaagagact tctgatcacc cctgctacca
     1141 cctggcccga gggacgtttc gtcgtggccg gtccacaata ccccaagacg cttcgctggc
     1201 cgccgaatgt ccagcggatt cagcaccttc cgccgaagcg tcaccgtgga ttctacaatg
     1261 cgcaacactt caccttgaac ctgacccggg ccgacatggt ggccgccgga tattcaccga
     1321 gcgttcgcct gttcgaggcc gcggcctgca gcactccgat catcagtgac cactgggatg
     1381 gactcgagac cctcttcgaa ccgggacgcg aaattctgat cgccacaacg tcccggcagg
     1441 tggtcgagtg gctctgtgac atgccggagc cggagcggaa aaagctcggc gctcgtgcac
     1501 ggcaccgggt cctggcggag cacacggcag cccaccgtgc ggcggagctc gaggggtacg
     1561 cactcacact cctttcacgc cagctctcct agccatgaca caacctctgg aacagacagt
     1621 gaagtctcgg cacgagcgtt tggaagagat cgccgccctg gcgccctggt ttcacaatct
     1681 gcatctcccc gatggaacgg agacggcacc ctcacatttt ctgggcgact ttcctcgata
     1741 caaatggcag gccttggcgc cgcaccttcc caaacggctc gatggctgga cggcgctcga
     1801 tatcggatgc aacgccgggt actacgcctt cgagctggcc cggcggggtg cccgggtcac
     1861 cggcatcgat gtcgatccac actatttgcg ccaggcggaa tgggcggcca gggaactcgg
     1921 cgtggaaaag gacatcgagt tccgggaaat gcaggtctac gatctggcag ccgaggatga
     1981 gaagttcgat ctcgttctct tcatgggagt gttttaccat ctccggtacc cgctcctcgg
     2041 attggatatc gttgcccggc gaactcgccg cctgatggta tttcagacgc tcacggtccc
     2101 cggcatggag gtgtatacca atacctggga ccggcccata cacgatcgag acgcgctgcg
     2161 ggatcccgtc tggcccagga tggcattcat cgagcaccgc ttcgccagcg atccgaccaa
     2221 ctggtgggtg ccgaaccacg ccggggtcga agccatgctg cgatcgagcg gaatgaatgt
     2281 ccgggcccac ctgggacatg agatttacct ttgcgagccg agtccaccgg gggcacccac
     2341 ccgcgcaccc tacgatttct cagccgaact gcgttcggcg acgggccgaa gccgctaggg
     2401 ctgcgctgta tcgatgatca tatatcgaga tcagcgatcc gccgccgaca cccgcacgct
     2461 tctcgcgaga gctcggtcca cactcgacga gctgagcgcc accagcagcc accagcagct
     2521 tgtggagatc ctgattgcac taggaacgct ggagagcgct ctcagcgacg cactgttccc
     2581 cgaagttgag gcagttcacc cgaccataga cctgctgcgc caggcaagcg tcgccgccgg
     2641 acacatgctg tggcacagct ggcacggccg gccccatcta atcgacaggt gggccgggct
     2701 ggcgagtcgc gcactgtctc aggcgggcgg gcacgtactg ccgaaacagg tggagatcag
     2761 cgtccctgag gggtacgcat actatggcgt ctatccggag atgtacctcg aagcggcgaa
     2821 atccttcgct cagccgctcc agcgatcctc tgccgtgtgt ctcgggttgc gaagcatcgg
     2881 atcgagcctc tccgcggtcg tggcggccgc tctggaggag ctgggctgga atgtccaatc
     2941 ctggactctg cgtcctcgag ggcacccgtt tgaacgcact ccgcgactcg ctgcagaact
     3001 ggatcagaag tttcgatcaa ccaccgatac ccggttcctc gtcatagacg agggcccggg
     3061 aatcagcggc tcctcgttcg tcggaacggg agcgatgctt cgggaactag gaattccaca
     3121 ggatcgtatc acgttgtttc ccagttggag aacagaaggc ggccagctga gatcgcccgc
     3181 ggcacgggat caatggtcca gctatgaaca ggtagtcacg acgttcgaga gtgtctggct
     3241 ggagtcggga cgtctgacac aggcgtttcc cggtgcgctg accgaccttt ccgcgggctc
     3301 atggcgccag ctagtgttcc agtcgtccgc ttgctttccc ccggttcagc ctcagcacga
     3361 gcgccgaaag tatttgctcc gtccgacgga gaggacatcg gcagcacagc aaccgctact
     3421 gctgaagttc gccgggttgg gttcgcaagc gagagccaac gtgctccgcg gcaaggctct
     3481 ggcccaggca ggattttccc ctgctccggt ggatctgtgt cacggtttca tggccacgcc
     3541 cttcgttgaa ggaaaaccgg taccgatggg gcatacgtcc ggtgagttcc tccagagagt
     3601 agcccagtat ctggcccatc tggcgtgcgc caatcgagct gaacccacgg tagcggatgc
     3661 cgagctgcgg gaaatgaccg cagttaatct gaacgaagcg atggacagtg aggaatttcg
     3721 ccggctcgaa cggctcctcc cccggaaatg gaccgagtgg ccggtcgcgc tggatgccag
     3781 aatgcagccc catgaatggc tgcagactcc gacaggatac gtgaagacgg acgcgatcga
     3841 tcatcaccgt gatcactttt tccctggttg tcaggatat
//
LOCUS       DASRPQ010000275         1223 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2550169, whole genome shotgun sequence.
ACCESSION   DASRPQ010000275 DASRPQ010000000
VERSION     DASRPQ010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1223
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2550169"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..593)
                     /locus_tag="VFD73_03195"
     CDS             complement(<1..593)
                     /locus_tag="VFD73_03195"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HZI73024.1"
                     /translation="MNDENLVAVLGQQIRVDIRWGTGIPLVLCNGIGASLEVLDPFVA
                     QLDPSTTVVRFDVPGSGGSPDSLLPYRFPYLATVLSALLKKLGILSRHTGGSQVDVLG
                     LSWGGALAQQFAFQNPHRCRKLILVSTGTGSFMIPGKPSVLAKMLTPRRFLDHRYAAK
                     IAPEIYGGAARNDPTMIKRVFDRQLMAGSYVGYMHQL"
     gene            complement(797..>1223)
                     /locus_tag="VFD73_03200"
     CDS             complement(797..>1223)
                     /locus_tag="VFD73_03200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73025.1"
                     /translation="ALTEPGAVKMLGTPVDLGMVMADTYVVAGIADHISPWQACYHSA
                     RTLGSKELRFILSTSGHIAALVNPPGNPKASYRAGTTDEPDPQRWVTSAEEHRDSWWP
                     DFSAWLAERGGDEKPAPRKLGGDGLETLASAPGSYVHER"
BASE COUNT          224 a          393 c          388 g          218 t
ORIGIN      
        1 atcagctggt gcatgtatcc gacgtaggag cctgccatca actggcggtc gaagacacgc
       61 ttgatcatcg tggggtcgtt gcgcgctgca cctccgtaga tttccggagc gatcttggcg
      121 gcgtagcggt gatccagaaa tctccgcggc gtcaacatct tcgccagcac cgagggcttg
      181 ccagggatca tgaacgaacc ggtaccggtg gacaccagaa tgagtttccg gcaccggtgc
      241 gggttttgaa acgcgaactg ctgggcaagt gcgccgcccc atgacagtcc cagcacgtcg
      301 acctgagacc cgccggtgtg ccgactcagg atgccgagct ttttcagtaa cgccgagagg
      361 acggtggcca gatacgggaa tcggtatgga agcagtgaat ccggcgagcc gccggaaccc
      421 ggcacatcaa acctcaccac agtcgtgctc ggatccagct gtgccacaaa agggtcgagc
      481 acttctaggc tcgccccgat tccgttgcac agcaccaacg gaataccggt tccccatcgg
      541 atgtcgaccc ggatctgctg gccgaggacc gcaacaaggt tttcatcgtt catgcttgcg
      601 ctcacgagag agcactatga catcagcgac gccatccccg tgcttcggct gctgccgtgg
      661 aaccggtccc gccagtatca agcgtagcct tgcggctgcc agcacatcgg cgctcgcagc
      721 cgctgcccgg ccaactctcg tcaaaatgca ctcccaggcc gccagcagga gttcgacggg
      781 aagcgcgagg cggctgtcaa cgctcatgga cgtagctacc cggcgccgaa gccagcgtct
      841 cgaggccgtc accgccgagc ttgcgggggg cgggtttctc atcaccgccg cgctccgcca
      901 gccacgccga gaagtcgggc caccacgagt cgcggtgctc ctcggccgag gtcacccagc
      961 gctgcgggtc gggctcgtcg gtggttcccg cgcggtagga ggccttcggg ttgccaggtg
     1021 gattgaccag cgcggcgatg tgtccgctgg tcgagaggat gaatcgcagt tctttgctcc
     1081 ccagtgtccg ggcactgtgg tagcaggcct gccatggtga gatgtggtcg gcaattccgg
     1141 cgacgacata ggtatcggcc atcaccatgc ccaggtccac gggcgtgccg agcatcttca
     1201 ccgcccctgg ttcggtcagg gcg
//
LOCUS       DASRPQ010000276         2064 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4417531, whole genome shotgun sequence.
ACCESSION   DASRPQ010000276 DASRPQ010000000
VERSION     DASRPQ010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2064
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4417531"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..307)
                     /locus_tag="VFD73_03205"
     CDS             complement(<1..307)
                     /locus_tag="VFD73_03205"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HZI73026.1"
                     /translation="MERQLVSSGTSWESAIGYSRAVRTGPWVHVAGTTATGPDGAIVG
                     VGDPYAQTVQVLRNIARALEEAGSSLGDVVRTRMYVTNMDHWPEIGRAHGEFFRDIRP
                     "
     gene            complement(317..493)
                     /locus_tag="VFD73_03210"
     CDS             complement(317..493)
                     /locus_tag="VFD73_03210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73027.1"
                     /translation="MPNPREEQNSESVDPGRVLLILLRLGERYYDVAPASDRIASCVW
                     AELTDSEEHPSVLS"
     gene            757..1836
                     /locus_tag="VFD73_03215"
     CDS             757..1836
                     /locus_tag="VFD73_03215"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HZI73028.1"
                     /translation="MLTGKVPDRVLVVDAEPGVRETIEGHLTHRGYEVLTAVSGEEAL
                     GMLTRQKVACMLADARLFGTRSGELLSRALERDPNLAVLVATSTASVEEAVRYLQYGA
                     VDYLAKPLDLPRLEAALQRALRRRAELARERSMVRVLKEEVVNVGAELARERSKVKGL
                     SIATLQALVAVVEARDPWFAGHSQRVAQLAASLAAETSRSDEEIEQVRQAGLLHDIGM
                     ISVPEGLLSKAGPLSAEEFEQIKRHASVGSQILAPLPHLNGVSGFVRGHHERWDGTGY
                     PDGLAGDAIPWGARLIGAAEIYDALATARPYHEQLTPELAVERMRGLIGTVIGPEVHR
                     VLATVVDRGKALVFVADEPSRELTL"
BASE COUNT          374 a          641 c          655 g          394 t
ORIGIN      
        1 cgggacgtat atccctgaag aactcgccat gggctcggcc gatctccggc cagtgatcca
       61 tattcgtgac gtacatgcgg gtgcggacga cgtcgcccag agaggacccg gcttcctcga
      121 gtgcgcgagc gatgttccgg agcacctgta ccgtctgggc atagggatca ccaacgccca
      181 caatcgctcc gtcaggaccg gtggcggtgg ttcccgcgac gtgcacccag ggtccggtgc
      241 ggaccgcgcg ggagtagccg atggcggact cccatgaggt tccactggaa accagctgcc
      301 gttccatgca ccaagatcag gaaaggacgg agggatgctc ttcggagtca gtcagctctg
      361 cccacacgca agacgcgatg cggtcagatg cgggggccac gtcgtagtac cgctctccca
      421 aacgcagcag aatcagaaga acccggccgg ggtcgactga ttcggagttt tgctcctcgc
      481 ggggattcgg cacgcgcaac ctttctggga tgaacttcac cgtgagtttt cggtcgggtg
      541 gaaccgattc tttacccgtt gcgacacttg aacgtgctgc tgcggaagag agtagaccat
      601 tgtaacctgc caccgcgtgg gacactagag cagcaggcgc cgccgcaacc ccgttcccgc
      661 tcaagaaagc ctccactcat ccgatccttt tcttggtgct ctgattctcc ccccactcgg
      721 tcgcattcca tcacgcaagt agactcgagg agagtcatgc tcacgggcaa agtgcctgat
      781 cgtgtcctgg tcgtcgatgc agagccgggt gttcgcgaga cgatcgaagg acacctgacc
      841 catcgcggat acgaggtgct gacggcggta tcgggcgaag aggccctggg gatgctcacg
      901 cggcagaagg ttgcctgcat gctcgccgac gcccgcttgt tcggcactcg ctcgggcgag
      961 ctcttgtccc gtgcactgga acgcgatccc aatctggcgg tgctggtcgc cacttcgacc
     1021 gcttcggtcg aggaagccgt acgctatctc caatacggtg cggtggatta cctggccaag
     1081 ccacttgacc tcccgcggct cgaggcagca ttacagcgag cgctgaggcg gcgagcagag
     1141 ctggctcggg aacgaagcat ggttcgggta ctcaaggaag aagttgtgaa cgtcggcgct
     1201 gagctggccc gagagcgctc caaggtcaaa ggcctgtcga tcgccacgtt gcaggcgctg
     1261 gtcgcagtgg tggaggcgcg ggatccctgg tttgcgggtc actcgcagcg agtagcgcaa
     1321 ttggcggctt ctctggcggc cgagaccagt cgcagtgacg aggagattga gcaggtacgc
     1381 caggcagggc tgctgcacga tatcggcatg atctccgtgc ccgaaggcct gctctccaaa
     1441 gcgggtccgc tcagcgctga agagttcgag cagatcaagc gacacgcttc tgtcggttcc
     1501 cagattctgg cgcctctgcc gcacctgaac ggggtgagcg gctttgtgcg cggacatcac
     1561 gagcgctggg atggcacagg gtaccccgac ggcttggcgg gggacgccat tccctgggga
     1621 gcgcgtctca ttggcgcggc cgagatctac gacgctttag ctacggcccg accataccac
     1681 gagcagttga ctcctgagct tgccgtcgag cggatgcgtg gcttgatcgg cacggtcatt
     1741 ggacctgagg tccatcgggt gctggcaacc gtggtggatc gggggaaggc tctggtgttc
     1801 gtggccgatg agcccagcag ggagctgacg ctgtagatcc cgcaagttgc ccgggcgcct
     1861 tgcccgtttc tgccccagat ctgtgagacc ctttccttca tctgctgtcg ccaacgcccc
     1921 ggcagccggc caaccagttc ctccgccgtc ccttctaagc aaccactaat caaccatttg
     1981 gccgttccac tgcagctgtt tgcactgctg ccactgcact cctccgcact gtgtggtaca
     2041 ggcgttgcca ccacccccgc caga
//
LOCUS       DASRPQ010000277         1197 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1917402, whole genome shotgun sequence.
ACCESSION   DASRPQ010000277 DASRPQ010000000
VERSION     DASRPQ010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1197
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1917402"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1197
                     /locus_tag="VFD73_03220"
     CDS             <1..>1197
                     /locus_tag="VFD73_03220"
                     /inference="COORDINATES: protein motif:HMM:NF024298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HZI73029.1"
                     /translation="ECVFSEDFDAITAVAISRSGQDWAALSRRGEMRVWREDGKRLHR
                     AWQAHTNTTLALAFSPNEHTLASGSEDGSVKLWDVASGALIWSGWHTKVTLCLAFSPD
                     GSLLASGSQDGSVRLWEASLGTPLEDIPHPGAVFALAWSPDGCLLASGDFAGTIRLWE
                     RQQTGPAHCVEILSEHTTLVRGLTFAPDGSVLASASWDSTVKLWERASGRCLKTLVGH
                     TERVQALAWSPDGGTLASGGRDTTIRLWNGKLGALRAVLQGHSAIVFGLAFTPDSSHL
                     LSGSDDGTLRLWEVERALCVRVMQGSVASLYDLDWSPDGTQLASSGTDTLVTIWEVAG
                     GRPRGVLRGHRRRVYGVAWSPDGSRLVSSGSDSDIRLWDPTLGSCLQILGDSDSADTI
                     FYGVAW"
BASE COUNT          193 a          354 c          428 g          222 t
ORIGIN      
        1 tgagtgcgtc ttttcggagg acttcgatgc catcaccgcc gtggctatca gccgcagtgg
       61 gcaggactgg gcagccctca gcaggcgggg ggaaatgcgg gtgtggcgcg aggacggcaa
      121 gcgcctgcac cgtgcctggc aagcccatac caacacgacg ttagccctcg ctttcagccc
      181 gaatgaacac accctcgcca gtggaagcga ggatggcagc gtcaagctgt gggacgtagc
      241 gagtggggcc ttgatctggt cgggctggca cacgaaggtc accttgtgct tggcgttttc
      301 ccccgatgga agcctgcttg ccagtggaag ccaggatggc agcgtccggc tctgggaggc
      361 ttcgctgggc acgcctctgg aggacatacc gcatcccggt gcggtcttcg cgctggcatg
      421 gagcccggat gggtgcttgc tcgccagtgg cgacttcgcg ggcacgatcc ggctctggga
      481 gagacagcag accggaccgg cccactgcgt tgagatcctg tccgagcata ccaccctggt
      541 gcgcggcctg acctttgccc ccgacggcag cgtgctcgcc agcgcgagct gggatagcac
      601 cgtcaagctg tgggaacgcg ccagcggacg ctgtctcaag accctggtgg ggcataccga
      661 gcgggtgcaa gccctggcct ggagtccgga tggaggcacg ctggctagtg gcggtcggga
      721 cacaacaatc cggctgtgga atggaaagct cggcgcattg cgggcggtgc tgcagggtca
      781 tagcgccatt gtgtttggcc tggccttcac ccccgatagc agccacctgc tcagtggtag
      841 tgacgatggc accctgcggc tgtgggaggt cgaacgtgcg ctgtgcgtgc gggtcatgca
      901 gggctccgtg gcctccctct acgacctcga ctggagtcca gacggcacgc agttggcgag
      961 ttccggtacg gataccctgg tcaccatctg ggaggtggcc ggtgggaggc cgcgaggcgt
     1021 gttgcgcggt catcgcaggc gtgtatacgg cgtggcatgg agtcctgatg ggagcaggct
     1081 ggtgagttcc gggtcggata gtgacatccg gctctgggac ccaaccctgg gctcctgtct
     1141 ccagatcctt ggggactccg actccgctga caccatcttc tatggtgtgg cgtggag
//
LOCUS       DASRPQ010000278         3381 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_346354, whole genome shotgun sequence.
ACCESSION   DASRPQ010000278 DASRPQ010000000
VERSION     DASRPQ010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3381
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_346354"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1395
                     /locus_tag="VFD73_03225"
     CDS             <1..1395
                     /locus_tag="VFD73_03225"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004370 - glycerol kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase"
                     /protein_id="HZI73030.1"
                     /translation="QSFPQPGWVEHDPEEIFRVSIEALREALAGSQGQPAALGITNQR
                     ETIVLWDRRTLAPVAPAIVWQDRRTAERCRELREAGLEPMLRARTGLIADPYFSATKL
                     EWLLRDPGIRRRAERGELAAGTIDSWVIARLTGGRLHVTDHTNASRTLLYDLETRNWH
                     PDLLGLFGIPREVLPSIVTSSGVVGDIDPEHLGFPLPIAGIAGDQQAALFGQGCVAPG
                     LAKNTYGTGAFLLVMAGEDLPLPVEGLLITVGCGPHGEPWYAVEGSVFIAGAAIQWLR
                     DGLRIINDAAESEALARSVPDTGGVHFVPAFVGLGTPYWEPEARGTITGLTRGTGRAH
                     LVRAALEAMAFSSAELLSTMSSAEGLTVPVLRVDGGAAANNWLMQFQADVLGIPVERP
                     DLIETTALGAAGLAGLGSGVWTSAEEFLAGRKFTRFEPRLDASERRAKLKDWQRAIAA
                     ALFWARDKGEAGAP"
     gene            1490..1903
                     /locus_tag="VFD73_03230"
     CDS             1490..1903
                     /locus_tag="VFD73_03230"
                     /inference="COORDINATES: protein motif:HMM:NF015085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HZI73031.1"
                     /translation="MQAGRKFIVGAALIVGSVGFMIAEGVKETGVYFLTPAELAAKTS
                     ADPTFVGNVGFKLGAKVVPGSVHRYSSAQRIDFQVSDGVKTYPVVYQGLVPDTFTDAS
                     DIEVIVEGRLGQDGVIRATDVLAKCGSRYEAVPKA"
     gene            1910..>3381
                     /gene="ccsA"
                     /locus_tag="VFD73_03235"
     CDS             1910..>3381
                     /gene="ccsA"
                     /locus_tag="VFD73_03235"
                     /inference="COORDINATES: protein motif:HMM:NF013725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HZI73032.1"
                     /translation="MTLLGQFALWAAFLLGLWCVVLSFSGRWRTRPELSSTIVRSVYA
                     IFGCLVVASLSLWTGLIRHDFNMEYVWAYTSSNLPTPYIVSAFWAGQKGSLLFWAVVL
                     SLFATAAQLLTPRRFGYLMPYVAGVTSAVVAFFVSVMLFAANPFERLGFTPADGRGLN
                     PQLQNVGMVIHPPMLYLGYISITIPFAFAVAALLSRRLDVGWLHAIRKWTLVSWLFLS
                     IGITLGMWWAYVELGWGGYWAWDPVENASFLPWLTMTAFLHSVMIQEKRGMLKRWNFG
                     LIIGSFLLSIFGTFITRSGVIASVHSFTQSNVGYLFLGFLVVTAVLAFTLLHTRWDVL
                     EADVRLESVVSREAAFLFNNLLLVGVAFSVLWGTLFPILSELVRGTKITVGAPFFNRV
                     NVPLGLLLLALTGIGPLIAWRKASTANLRRQFVAPTLSGLLTLVGLGAAGVRDFYALC
                     ALSLAGFVAGTIVQEFYRGIRARRRMHGESAAMAFARLVAR"
BASE COUNT          531 a         1010 c         1113 g          727 t
ORIGIN      
        1 cagtccttcc cccagccagg atgggtggag catgatccgg aagagatctt ccgggtctcg
       61 atcgaagcgc tgcgcgaggc gttggccggt tcccaagggc agccggccgc gctcggcatt
      121 accaatcagc gggaaaccat cgttctttgg gaccggcgga ccctcgctcc cgtagccccc
      181 gccatcgtct ggcaggatcg caggaccgcc gagcgctgcc gtgagctccg agaggctggt
      241 ctggagccaa tgctccgggc tcgtacgggg ctcattgccg acccctactt ttccgccacc
      301 aagctcgaat ggctcctgcg cgatcccggt attcgacgcc gggcagagcg aggcgagctt
      361 gccgccggca caatcgacag ctgggtgatc gccaggctta ctggcgggcg gctgcatgtc
      421 accgaccaca ccaatgcctc caggacgctg ctgtacgatc tggaaacccg gaactggcac
      481 cccgatctcc tggggctgtt cgggatacct cgcgaggtgc tgccatcgat cgtcacgtcc
      541 tcaggggtgg tgggcgacat cgatccggag cacctggggt ttcctctgcc aatcgccgga
      601 atagccggtg atcagcaagc agcattgttc ggccaagggt gcgtggctcc gggcctggcc
      661 aagaacacct acgggacggg ggcctttctc ctggtcatgg ccggcgaaga cttgccgctt
      721 ccggtcgagg gtctcctaat cactgtgggg tgtggtcccc atggcgagcc atggtatgcg
      781 gtggaaggaa gcgtattcat cgcgggagcg gccatccaat ggctccgcga tggtctccga
      841 atcatcaacg acgctgcgga gagcgaagca ctggcgcgca gtgttcccga taccggcgga
      901 gtgcacttcg ttcccgcctt tgttggcctg ggcacgccgt attgggagcc tgaggcgcgg
      961 gggacgatta ccggtctcac tcgcggcacc gggcgcgcgc atctagtgcg ggctgcgctc
     1021 gaggccatgg ccttcagcag tgccgagctc ttgagcacca tgtcgtcggc ggagggcctg
     1081 actgttccgg tgctccgggt cgacggtgga gcagccgcga ataattggtt gatgcagttt
     1141 caggcggatg tgctggggat cccggtggag cggccggatt tgatcgagac aacggcgcta
     1201 ggcgccgccg gcctggccgg gttggggtcg ggcgtctgga cgagcgcgga ggagttcctg
     1261 gccggccgaa agttcacccg gttcgagcca cgcctggatg cctcagaacg tcgagccaaa
     1321 ctcaaggact ggcagcgggc gattgcggct gcgctgtttt gggcgaggga caaaggagag
     1381 gcgggagcgc catgatgaat gggccggttg agaggtggtc ggattggcgt cgctgcatgc
     1441 cacctttaaa ggctatattg aaagaggctg atccttctcg gagctcctga tgcaggcagg
     1501 ccgcaagttc atcgtcggtg ccgcgctgat cgtgggcagt gtgggcttca tgattgccga
     1561 aggcgtcaag gagaccggcg tgtactttct cacgccggcc gaactggcag ccaagaccag
     1621 cgcggatccc accttcgtcg gcaacgtcgg cttcaagctc ggggccaaag tggtccccgg
     1681 ttcggtccac cgctatagca gtgcgcaacg catcgatttt caggtctccg acggggtaaa
     1741 gacgtatccc gtggtgtatc agggcctggt acccgacacc tttaccgacg ccagcgatat
     1801 cgaggtgatc gtcgaaggcc gcttgggcca ggacggggtc atccgcgcca ccgatgtgct
     1861 cgcgaaatgc gggtcccgct atgaggctgt tcccaaggcc tgacatttca tgaccctgct
     1921 tggacagttt gctctttggg ctgccttcct tctggggctc tggtgcgtcg tcctctcctt
     1981 ctctggcaga tggcgaaccc gaccagagct cagctccacg attgtgcgtt cggtgtatgc
     2041 cattttcggc tgcctcgtgg tcgcttcgct gtccctctgg acagggttga tcaggcacga
     2101 cttcaacatg gaatacgtgt gggcctatac ctccagtaac cttcccacac cctacatcgt
     2161 ttcggcattc tgggcgggac agaaaggatc gctgctcttc tgggcggtgg tgctctcgct
     2221 gttcgcgact gcggcgcagc tgctcacgcc gaggcgcttc gggtatttga tgccgtatgt
     2281 ggccggggtg acctctgcgg tggtcgcctt tttcgtcagc gtgatgctgt tcgccgcgaa
     2341 tcccttcgag cgactcgggt tcactcccgc ggatggccga gggctgaacc cccagctcca
     2401 gaacgtcggg atggtgattc acccgccgat gctgtacctg ggatacatca gcatcacgat
     2461 tccgttcgcg ttcgctgttg ccgcgctgct ctccaggcgg ctcgatgtcg gatggcttca
     2521 cgcaatccgg aagtggactt tggtgtcttg gctgttcctg tccatcggaa ttacgctggg
     2581 catgtggtgg gcctacgtcg agctgggatg ggggggctac tgggcgtggg atccggtgga
     2641 gaacgcgagc tttctcccct ggctcaccat gacggcgttc ctccattccg tgatgattca
     2701 ggaaaaacgc ggaatgctga agcggtggaa cttcggcctc atcatcggaa gctttctcct
     2761 cagcatcttc ggcaccttca tcacccgttc gggcgtgatc gcgagcgttc acagcttcac
     2821 gcaatccaat gtcggctacc tcttcctggg ctttctggtg gtcactgcgg tcctggcgtt
     2881 tacgctgctg cacacccgtt gggatgtcct ggaggctgac gtccggctcg aatcggtggt
     2941 gagccgtgaa gcggcgttcc tgttcaataa tctgctgctg gtaggagtcg cgttctcggt
     3001 tttgtggggg acgctatttc cgatcctctc cgagctcgtg cgcggaacaa agatcaccgt
     3061 aggcgctccc ttctttaacc gggtcaatgt gccgctggga ctgctgctgc tggcattgac
     3121 ggggataggg ccgttgatcg cgtggcgtaa ggcgtccacc gccaaccttc gccgccagtt
     3181 cgtcgctccc actctctcgg gattgttgac gctggtcggg ttgggtgcgg cgggagtgcg
     3241 agacttctac gccctctgtg ccctgagcct ggcgggattc gtggcgggga ccatcgtcca
     3301 ggaattctat cgcgggatcc gggcccgccg gcgaatgcat ggcgagtccg ctgctatggc
     3361 attcgcccgg ctcgttgccc g
//
LOCUS       DASRPQ010000279         1206 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3478038, whole genome shotgun sequence.
ACCESSION   DASRPQ010000279 DASRPQ010000000
VERSION     DASRPQ010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1206
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3478038"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..612)
                     /locus_tag="VFD73_03240"
                     /pseudo
     CDS             complement(160..612)
                     /locus_tag="VFD73_03240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933337.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(883..>1206)
                     /locus_tag="VFD73_03245"
     CDS             complement(883..>1206)
                     /locus_tag="VFD73_03245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73033.1"
                     /translation="LGGGTACAGCRGSRSFAIWTGRCAVGKNTIDKTGFLIADKPKQE
                     KGWQAHAAAAMKMRNRMARLKTAQAPHSDRALIEAFIRERGITKVAMGASGPPSGRDE
                     VIEEL"
BASE COUNT          236 a          378 c          378 g          214 t
ORIGIN      
        1 gtacgggttg gtttccgtcg cagccgtgat tgctggagtg gtgttcggag acataaccga
       61 gccgtctgta aagaggatgg ctcagcgctg gcggcagtcg gtaagccgaa agcgggagaa
      121 gccgggtcag gacaagaacg gctaaatcca agaaacagct acatgcgtgg agtcggtcct
      181 ctgccgcccc cgggccttga ggacgctgag ctctcgggcg acctcaagca gccgctccag
      241 caagcgctcg tgcgcgccac cagccagaag acgatctcga aactcgcaga gcacgctgaa
      301 gtcagagccc gggtcagaca gctcgaggcc gagcaggtac ttccagtcaa tccgcgcccg
      361 gaccgcctca gcggcctgcc gatcgctcaa gccctcgcgg aacggcatca gcgtgatcag
      421 ggccaggcgc cagggtggac aggctggctg accctgcttg ggatagaggt cggcgaagtg
      481 gccatccgcg aagatcgtcc cgagcgtgtc gcgcagggtc agataggggc tgcctttggg
      541 aaaggcggcg cgagcgatgc gggcggtttg ttcgggcaca gacgggatcg ggtgctgcgg
      601 gcagagcgac atggcgaagc ctccagagat caccgcgcca acgccgctct cgaccctccg
      661 tctcacccat tcgccaacgg tatccaggcg aaaatgggac agtcgggtcg agctatccgc
      721 ccgcgaggac gagccccaaa atccatccga tcagagccct cgccaggccc cgcatttggc
      781 cctgtggcgg acgttgtggt tggggaggag atggcaccgg acaatcgaaa cgcgcgcctg
      841 taagtctccc aaccgcccta acgggcatgg gtatgtccga aatcaaagct cttcaattac
      901 ctcgtctctg ccggagggtg gaccgctcgc acccatcgca acttttgtga tgccccgttc
      961 gcgaatgaac gcctcgatca gcgcgcgatc cgaatgagga gcctgagccg ttttcagccg
     1021 cgccatgcgg ttccgcattt tcatggctgc agccgcgtgc gcctgccatc ctttctcctg
     1081 tttcggtttg tcagctatca ggaaacccgt tttgtcgata gtgttcttac ccacggcgca
     1141 tctgcccgtc catatggcaa agctgcggga accccggcag cctgcacatg ctgttccacc
     1201 gcctaa
//
LOCUS       DASRPQ010000280         1711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3795359, whole genome shotgun sequence.
ACCESSION   DASRPQ010000280 DASRPQ010000000
VERSION     DASRPQ010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3795359"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1540
                     /locus_tag="VFD73_03250"
     CDS             <1..1540
                     /locus_tag="VFD73_03250"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HZI73034.1"
                     /translation="GVSGSASGSSHGDAGGWVRGGSRSDRGGFFLAGDGQRQQGWRDN
                     SAYWLGNGILRGWRQVGSGRLEGGLVLYGSNWDSPGFVSISRFNNDSLRQAMDPTDGG
                     TAYRGILHGRYTTVLGQTGIEATAWGQAVHSGVYLTIPEDGLLNQSDEEDRRTALGGR
                     FQVSRPVGGGDFSAGFDGRLDVAKYDLYDTEQRVRLDPSIQYDARYFGGGAFARWRTL
                     VGEHVALDLGVRADGVYYRSLNRLAGTPWTGAGAILLSPKLGARYLVGGGWSLLGSFS
                     QGFRGAPGVIGDPSLEPVRGWSKEVGARYDGASFTGQLALFRLDVSHERIQDPVTREV
                     LPTGKSVRQGINLDGQLRVGSRITIRADGTVNDAHVKGDPGKGLTPLVIPDLDVTVNG
                     KPIRPSYHIEPLEPGDPVPNVASWLGRVGMDAALTSRLTARGQLRLSGPYTPIGEPGI
                     ETRSYAVVDLGTSVELPGFGAVADLELQNVFDAKYPEIRASGFINPGAPRTLRAALRF
                     TDDQ"
BASE COUNT          282 a          544 c          585 g          300 t
ORIGIN      
        1 cggcgtctcc ggcagcgcct cgggctcgag ccacggcgat gccgggggct gggtccgggg
       61 aggctcgcgg agcgaccggg gaggcttctt cctcgctggt gatggacagc gccaacaagg
      121 ctggcgcgac aactctgcgt actggctggg gaacgggatc ctccgcgggt ggcggcaggt
      181 cggctccggc cgcttggaag gtgggctggt cctgtatgga tccaactggg actcgcccgg
      241 cttcgtctcg atctcccgct tcaataacga ttcgctgcgc caggcgatgg atcccaccga
      301 tggcggaacg gcgtaccgcg gcattctgca cggccgatac accacggttc tgggtcagac
      361 cggaatcgag gcaacggcat ggggacaggc agtgcattcg ggagtgtatc tcaccattcc
      421 cgaagacggg ttgctgaacc agagtgatga ggaggaccgg cgtaccgcgc tcggagggcg
      481 gtttcaggtg agccgcccgg tgggtggcgg tgatttcagc gccgggttcg acggccgcct
      541 ggacgttgcc aagtacgacc tctatgacac cgagcagcgg gtccgcctcg acccgagcat
      601 ccagtacgat gcgcgctact tcggaggagg cgccttcgcc cgctggcgca cgctggtggg
      661 agagcacgtc gcgctcgatc tcggggttcg tgccgacggc gtatactatc gaagtctgaa
      721 ccggctcgcg ggcactccct ggaccggcgc cggcgccatc ctgttgagcc ccaagctggg
      781 cgcgcgctac ctggtgggag gcggctggtc gctgctcggc tccttcagcc agggattccg
      841 cggcgctccc ggcgtgatcg gcgatccctc gctggaaccg gtccggggct ggagcaagga
      901 agtgggtgcg agatacgatg gagcgtcgtt caccggccag cttgccctgt tccgcctgga
      961 cgtgtcgcac gagcggatcc aggatccggt cacccgcgaa gtgcttccaa ccggaaagag
     1021 tgtccggcag ggaatcaacc tcgacggcca gctgagggtc ggctcccgaa tcaccatccg
     1081 ggctgatggc acggtcaacg acgcccacgt caagggtgac ccgggcaaag ggcttacccc
     1141 actggtgatc ccggatcttg acgtgacggt gaatgggaag ccaattcgac cgtcctacca
     1201 catcgagccg ctggagcccg gagacccggt gcccaacgtg gcgagttggc tcggccgggt
     1261 tggaatggat gcggcgctga ccagccggct caccgctcgg gggcagctcc gcttgtcggg
     1321 cccgtatact ccgatcgggg agcccgggat cgagacccga tcgtacgcag tggtcgatct
     1381 cggtacgtcc gtcgagctcc ccggttttgg ggcggtcgcg gacctggagc tgcagaacgt
     1441 attcgacgcg aagtatccgg agatccgggc ctccgggttc atcaacccgg gagcgccccg
     1501 cacgcttcgc gccgcgctcc gctttaccga tgaccagtaa tccgtcgcga ccttatcccg
     1561 aggatagttc cgtgcgaacc ttaactcgca gatttctggc cgttgtccct actgcacttc
     1621 tcggcggaat gctctggggc tgcggtagcg atgagcagca agcggttctg cccgaccaca
     1681 ccccgacgcg ttacaacctc attatcaaca a
//
LOCUS       DASRPQ010000281         2732 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2851197, whole genome shotgun sequence.
ACCESSION   DASRPQ010000281 DASRPQ010000000
VERSION     DASRPQ010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2732
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2851197"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..388
                     /locus_tag="VFD73_03255"
     CDS             <1..388
                     /locus_tag="VFD73_03255"
                     /inference="COORDINATES: protein motif:HMM:NF014619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="laccase domain-containing protein"
                     /protein_id="HZI73035.1"
                     /translation="AGWRGTAGGIVARGIERLTSLTSTPSSDIVMHCGVGICGTCYEV
                     GSEVMAGCGALAKGAGPWHLDLRECLADQAASAGIRVLTTSSWCSAHDGSRFYSHRAS
                     RGRDGRMVAYLGMLPANDPAVALPEV"
     gene            544..1026
                     /gene="rimP"
                     /locus_tag="VFD73_03260"
     CDS             544..1026
                     /gene="rimP"
                     /locus_tag="VFD73_03260"
                     /inference="COORDINATES: protein motif:HMM:NF014617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000028 - ribosomal small subunit assembly
                     [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0042274 - ribosomal small subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HZI73036.1"
                     /translation="MSADALLGPIRDHIAELGFELVDLRRAGTLQRPILQVRVDRPDS
                     RPGQGVTADDCAVISRSLERFLESRAMVGSRYVLEVSSPGWERPLRWPEHWRRFVGRE
                     ARVRAKSLSGRQRYRIVSVPDAEHIVLRRDDGTEVTLSLDEIHEATLVADSEVFGKRR
                     "
     gene            1091..2413
                     /gene="nusA"
                     /locus_tag="VFD73_03265"
     CDS             1091..2413
                     /gene="nusA"
                     /locus_tag="VFD73_03265"
                     /inference="COORDINATES: protein motif:HMM:TIGR01953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HZI73037.1"
                     /translation="MAGSTEMLAAFRELTTTKQLERSDLLELLRDGIHAALVRKFGPN
                     VRFELSVDELQGTIKVVRLRQVVETVEDPSSQITLEEAQYEDPDFQIGDMLEEEVPFV
                     DFGRLAVQAAKQRIIQRVREGERARIREEFTSKVGELLSGEVQQIERGKLVIMLNKFR
                     EAEAIVPYREQNHREHFHQGDTIRAVLKRLEETPKGPRLILSRGDPLFVKALFKLEVP
                     EIQQQVVEIRAIAREVGSRTKVAVISRDDAIDPVGACVGLKGSRVQAVVNELGGERID
                     IVPWSPDPERFARLALAPARVAKVFSDPEAKTIQAVVDEDQLSLAIGRNGQNVRLASE
                     LTGWKIDLYSSREWLERGGEGPLFAPLPPEEEMAGKVPLSELKGLSPDLTGILENAGY
                     KMLNDILDLEREDIAKIPGMTTETADQLMAFLSELTDEESGEESRPRA"
     gene            2410..2715
                     /locus_tag="VFD73_03270"
     CDS             2410..2715
                     /locus_tag="VFD73_03270"
                     /inference="COORDINATES: protein motif:HMM:NF013417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal L7Ae/L30e/S12e/Gadd45 family protein"
                     /protein_id="HZI73038.1"
                     /translation="MSRLLGLVGLGYRGGRIVVGVDAVRKELQANKCWCVVVAEDASP
                     RAVDKVVRLAGAKGVPMLAGPSAAAIGAQLGRPPVMAVGVRDRALAGGMVQQAAVRS"
BASE COUNT          471 a          795 c          944 g          522 t
ORIGIN      
        1 cgccggctgg agaggaaccg ccggtggaat cgttgcccgt gggatagagc gactcacatc
       61 gctgacctcg actccttcca gtgatatagt aatgcactgc ggcgtaggca tttgtggcac
      121 ctgctatgaa gtaggatctg aggttatggc gggctgcggt gccctggcaa agggagccgg
      181 gccctggcat ttggacctgc gggagtgcct ggcagaccag gcggccagtg ccggtatccg
      241 cgtgctcacc acctcttcct ggtgctctgc ccatgacggt tcgcggtttt acagccaccg
      301 ggcatcgagg ggccgggatg gtagaatggt cgcgtatctg ggaatgctgc cggcgaacga
      361 tcctgccgtc gcgctgcctg aggtctgagc cgctatcggc agtcgagccc gttacttcct
      421 ctctcgatct gcattgactc cccactagtc cgaggctagt tttacacgct gtctcgggcg
      481 gcgctggttg gggccgactg tcgatgtggg gtgttccccc acattttttt tccttctccg
      541 ccgatgtccg ccgacgcgct gctgggtccc attcgcgatc atattgccga gctggggttc
      601 gagctcgtcg atctcaggcg ggcggggacc ctccagcggc ccatcttgca ggtgcgcgtg
      661 gatcgcccgg acagccgacc cggccaggga gtcacggccg acgactgtgc ggtgatcagc
      721 cggtctctcg agcgattcct cgaatccaga gcgatggtcg gatcccgcta tgtgctggag
      781 gtgtcgtctc ccggttggga gcggccgctg cgatggcccg aacactggcg tcgctttgtc
      841 gggcgagagg cccgtgtccg cgcgaagtcg ctctctggcc ggcagcgcta ccggatcgtc
      901 tctgttcccg atgctgagca catcgtgctc cggcgggacg atgggaccga ggtcacgctc
      961 agcctggatg agattcatga ggccacgctg gtggctgaca gcgaagtgtt tggcaagcgg
     1021 cggtagccgg gacgcctggt gctcccgtca cgctgacggc gccgcttgag cccactcaga
     1081 gggagaatgg atggcaggat cgacagagat gttggccgcg tttcgcgagc tgacaacgac
     1141 aaagcaactc gagcgctccg atctgttgga gctgttgcgc gacggcattc acgctgcgtt
     1201 ggtccgcaag ttcggtccca acgtacgctt cgagctgagc gtcgacgagc tgcagggcac
     1261 catcaaggtg gtccgtttgc ggcaggtcgt ggagacggtg gaggatccca gctctcagat
     1321 cacgctggaa gaggcccagt acgaagaccc cgacttccag atcggcgaca tgctcgagga
     1381 agaagtcccc tttgttgatt tcggccggct ggcggtgcag gcagccaagc agcggatcat
     1441 tcagcgagtg cgtgagggcg aacgggcccg aatccgggag gagttcacgt ccaaggtggg
     1501 cgagctgctc tcgggcgagg tgcagcagat tgagcggggc aagctggtga tcatgttgaa
     1561 caagttccgg gaggcggaag cgattgttcc ttatcgcgaa cagaatcacc gcgagcactt
     1621 ccaccagggc gacaccattc gtgccgtgct caaacgcctg gaagagactc ccaagggtcc
     1681 ccgtctgatc ctctcgcgcg gcgatccgct gttcgtcaaa gcgctcttca agctggaagt
     1741 tcccgaaatt cagcagcagg ttgtcgagat ccgcgccatt gcccgagagg tcggcagccg
     1801 caccaaggtg gccgtcatct cccgtgacga tgcaatcgat ccggtcggtg cctgtgtggg
     1861 gctcaaggga tcgcgggtcc aagcagtggt caacgagttg gggggcgagc gcatcgatat
     1921 cgtcccctgg tcgccggacc ccgagcgctt tgctcggctg gcgctggcac ccgcccgggt
     1981 cgcgaaggtc ttttccgatc cggaggccaa gaccattcag gccgtggtag acgaagacca
     2041 gctctcgctt gccatcggcc gcaacggcca gaacgtgcgc cttgcctcgg agctcaccgg
     2101 ctggaaaatc gacctctact ccagccggga atggctggaa cggggtggcg aaggaccgct
     2161 gttcgcgccg cttcctcccg aggaggagat ggccggcaag gtacctctca gtgagctgaa
     2221 gggactgtcg cccgatctga ccggaattct cgagaacgcc ggttacaaga tgctgaacga
     2281 cattctcgat ctcgagcggg aggacatcgc gaagattccc gggatgacca cggaaaccgc
     2341 cgatcagctc atggcgtttc tctctgagct caccgatgag gagagcggcg aggaatcccg
     2401 accccgcgca tgagccgatt gctgggcctg gtggggttgg gctaccgcgg agggcgaatc
     2461 gtcgtgggag tcgacgcggt tcggaaggaa ttgcaggcga acaagtgctg gtgcgtagtg
     2521 gtggcggagg acgccagccc gcgtgccgtt gataaggtgg ttcggttggc cggtgccaag
     2581 ggggtaccga tgctggccgg gcccagcgcc gcggcgatcg gcgcgcaatt ggggagaccg
     2641 ccggtgatgg cggtcggagt acgggatcgc gccttggctg gcggcatggt tcagcaagcg
     2701 gccgtacgct cctgatggag gtatgagtgg tt
//
LOCUS       DASRPQ010000282         1506 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_971258, whole genome shotgun sequence.
ACCESSION   DASRPQ010000282 DASRPQ010000000
VERSION     DASRPQ010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_971258"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..398
                     /locus_tag="VFD73_03275"
     CDS             <1..398
                     /locus_tag="VFD73_03275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73039.1"
                     /translation="DGHCVTHDPGGLSALDPEVEQCHLLISSLQHGGDLPRVDLLEDL
                     RQQLPSLPILYLASAADATAVPEAQLPRDVQVLRSPFTSAELRAAVRRLLPQLGAGTV
                     LARPMVEPTTVTDILELPGGASAPEETNA"
     gene            391..543
                     /locus_tag="VFD73_03280"
     CDS             391..543
                     /locus_tag="VFD73_03280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73040.1"
                     /translation="MRDSVWVTLGLVVLIVLSVPTLRELRGWRAGRRAAWERERVLWR
                     AWISRP"
     gene            complement(802..>1506)
                     /locus_tag="VFD73_03285"
     CDS             complement(802..>1506)
                     /locus_tag="VFD73_03285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73041.1"
                     /translation="DKMDRFLKLPSGELARLADIQRKEELKRELGQGPPPLFGEVRQL
                     ILRKCRPGRAEQVRAIFEKQPFGELERLITQRLLDVLQAVARQELANDYWLRMVADLG
                     GRSFEEMRVIVLEFLDTDIFHLSREHCASFLEPLVESWDIDLATFALDISLNPRAVSE
                     HEKRFEFVEREADQLFVEEPGLTEFLQDASLSGTITVEEIEFLKRLRFKGRRPAALYF
                     YRELQNLRDPLHFRAP"
BASE COUNT          254 a          502 c          482 g          268 t
ORIGIN      
        1 gtgatggtca ttgcgtcacc cacgaccctg gggggctgtc ggccctggat cccgaggtcg
       61 agcagtgcca cctcctgatc agcagcctgc aacatggggg agacctgcca cgggtggacc
      121 tgctggaaga cctgcggcag cagctgccct ccctgcccat cctgtaccta gccagcgcag
      181 cggatgccac ggcggtgccg gaggcgcagc tgccgagaga cgtccaggtg cttcgttcgc
      241 cgttcacctc cgcggagttg cgggccgcgg tgcgccggct cctgccgcag ctcggagcgg
      301 gcactgtctt ggcccgcccc atggtagagc ctaccacggt caccgatata ctcgagctgc
      361 caggaggagc ctcggccccg gaggaaacca atgcgtgaca gcgtttgggt aacgctaggg
      421 ttggtggtgc tgatcgtgct gtcggtgccc actctccgag aactccgtgg ctggcgcgca
      481 ggtcgtcggg cagcctggga gcgggaacga gtcctgtggc gggcctggat cagcagacca
      541 taaaatgacg ggcgtgccga ggacttccgc cgctcggccc gatccgcttc gtcatatcca
      601 ctagccgtgc gctagccctg ccagagtccg ccgggatttc agcggattgt cggcaggatg
      661 gcgaagggaa ctagggctgc ggcatccagc agcctcacgg agcaccgttt ctgctgcgcg
      721 cccatgtcga tgccttgcgg ggcctgagcc cgaaccggct gttgttccac atccgtgaga
      781 ccgactcgtg gcgattccta cctatggggc gcgaaaatgg agcgggtccc tgaggttctg
      841 cagctcccgg tagaagtaga gagccgcggg acgcctcccc ttgaacctca gccgtttgag
      901 aaactcgatc tcctccacgg taatggtgcc gctgagtgac gcatcctgga ggaactctgt
      961 gagtcccggc tcctcgacga agagctgatc ggcctcccgc tcgacgaact cgaaccgctt
     1021 ctcatgctcc gagaccgccc tggggttcaa gctgatgtcc agggcgaacg tcgccaggtc
     1081 gatgtcccag gactcgacca ggggctccag gaacgaggcg cagtgctccc gagacaggtg
     1141 aaagatgtcc gtgtcgagga actcgagcac gatgacgcgc atctcctcaa agcttcgccc
     1201 gcccaggtcc gccaccatgc gaagccagta gtcgttggcc aattcctgtc tggccacggc
     1261 ctggagcacg tccagcagac gctgagtgat gagccgttcg agctcgccga agggctgctt
     1321 ctcgaagatc gcgcgaacct gctccgcccg gcccgggcgg cacttccgca ggatcagctg
     1381 gcgaacttca ccgaacagag gcggcggccc ctgccccagc tcccgcttca gttcttcctt
     1441 ccgctggatg tccgccagcc gcgccagctc cccgctgggc agcttcagga acctgtccat
     1501 cttgtc
//
LOCUS       DASRPQ010000283         1037 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4104895, whole genome shotgun sequence.
ACCESSION   DASRPQ010000283 DASRPQ010000000
VERSION     DASRPQ010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4104895"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            380..988
                     /locus_tag="VFD73_03290"
     CDS             380..988
                     /locus_tag="VFD73_03290"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZI73042.1"
                     /translation="MTWLDRYLQKWRIREARREMPPGARVLDIGTHDGTLFALAGARG
                     VGIDPELPAVASIPGVTLVKGLFPMDLPELPDESFDAVTALAVIEHVPETDLLAWSEA
                     IARLLVPNGRLIITVPAPAVDQILHVLIRLHLAAGMEAHQHHGFQPATLDNTFTAPLW
                     HQAKHRTFQLGLNHVYVFERAPQLPTQNPELHRHPPASRQGN"
BASE COUNT          162 a          362 c          319 g          194 t
ORIGIN      
        1 tatcgttacg tgctgccggc cgtgccgttc ggctgcctcg cggccgccat cgcattcagc
       61 cccggcaccg caggcggacg cctggtgcgg gcgctagctg cccgagcctg gaaccgcgag
      121 gttccggcac ctcgccggta gcatcggccc ggcccaggcg ccggcgccag cgtcctggat
      181 gtcgcgttcg ctcaccttcg ccgctagttt gccgctagtt tgctgcagtg ccagacattg
      241 acctaaaact gggtaaattt tcaggtgaca ctttgccagt ttgcaggggt ttcaagccct
      301 gtttgcggag agggcttcct gagccagtct cggaccttcg ccgctcgccc gtcgccagcg
      361 cgctgcatcg gaggaacaca tgacttggtt ggaccgctac ctgcagaaat ggcggatccg
      421 ggaagcgcgg cgcgagatgc cgcccggtgc gcgcgtgctc gatattggca cgcacgacgg
      481 cacgttgttc gctctcgcgg gcgctcgtgg agtcggcatc gaccctgagc tgcccgcagt
      541 ggcctcgatt cccggagtga cgctggtgaa gggcttgttc cccatggacc tgcccgagct
      601 gccggacgag tcattcgacg cggtcaccgc gctggcggtc atcgagcacg tacccgaaac
      661 cgacttgctg gcctggtccg aggcgattgc ccggctgctg gttcccaacg gacggctgat
      721 cattaccgtg ccagccccgg cggtcgacca gattctccac gtgctcatac ggcttcatct
      781 ggccgcaggg atggaggctc accagcacca cggattccag ccggccaccc tggacaacac
      841 cttcacggct ccgttgtggc atcaagccaa gcaccgcaca ttccagctgg gcctgaacca
      901 tgtctatgtc ttcgaacgcg ccccgcaact gccgacgcag aaccctgagc tgcaccgtca
      961 ccctccggcc agccgtcagg gcaactgagt aactcctgat tccgagtcgg cgcgctgcgt
     1021 cccgcgcctg cgcgatc
//
LOCUS       DASRPQ010000284         1807 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2551469, whole genome shotgun sequence.
ACCESSION   DASRPQ010000284 DASRPQ010000000
VERSION     DASRPQ010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2551469"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1378)
                     /locus_tag="VFD73_03295"
     CDS             complement(<1..1378)
                     /locus_tag="VFD73_03295"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HZI73043.1"
                     /translation="MPYRLVSFSGDQSFELPHGRSLVVGRGINSDIAIYDPTISRRHA
                     ELTVGPDGVQVKDLGSSNGTCINGNRVTAGRLQANDSITFGKVLFQLKEMRPSGAGAP
                     GPSAAAAVRPSPGPFAAPPVAGDTIVRQLNVSGAGPTGITSRDRRSGVGQLRVAAGSA
                     EERQAKKLSLLLDISQKLSGEFDLDKLLRNVVDMMFEVMDVDRVSILLRNETTGELVP
                     SISRSRLGDREFQQVPRSIVDKVIRERVAVVSDNTRSDSRFKGHSIVTQSVRSAMCSP
                     LMASGDRVLGLLYVDSVTAANTFSDEDLQFLVAFSGLVAIGIRNSRYAEQVRREALVR
                     SNFERYFAPNIAAEIAQQEAVVPLGGERRPITILFSDIRGFTSMAESMGPDAIAQLLT
                     EYFSEMVEIVFEHGGTLDKFVGDAIMALWGAPIAHADDPDRALRAAVAMQRGVARLNQ
                     QWALAGRPE"
     gene            complement(1421..>1807)
                     /locus_tag="VFD73_03300"
     CDS             complement(1421..>1807)
                     /locus_tag="VFD73_03300"
                     /inference="COORDINATES: protein motif:HMM:NF012640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HZI73044.1"
                     /translation="GAPKVRAMEIIDELEPVRRGPYAGAVGYVGWGARTLDTAIAIRT
                     CVMRGNRAWIQAGAGIVADSDPVNEWHETEAKARAVLLAIALAVREAEKAEKAEKAEK
                     AEKAEKAEKAEKAERTVQNKPRQRKK"
BASE COUNT          307 a          620 c          536 g          344 t
ORIGIN      
        1 tttcgggccg tcctgccagc gcccactgct ggttcaagcg agcaaccccg cgctgcatcg
       61 ccacggcggc gcgcagcgcc cgatcgggat cgtcggcgtg cgcgatcggt gctccccaca
      121 gtgccatgat tgcgtcaccg acgaatttgt cgagcgttcc accatgctcg aacacgatct
      181 ccaccatctc gctgaagtac tcggtcagga gttgcgcgat tgcgtcggga cccatcgact
      241 ccgccatcga ggtgaagccc cggatgtcgc tgaagagaat cgtgatgggt cgccgctcgc
      301 ctccgagtgg aaccaccgcc tcttgttgag cgatctcggc tgcgatgttc ggagcgaagt
      361 agcgctcgaa gttcgaacgc accagcgctt cgcgccgcac ctgctcggcg tagcggctgt
      421 tccggatgcc gatcgccacc agaccactga acgctaccag gaattgcaga tcttcatcgc
      481 tgaaggtgtt ggccgcggtc acgctgtcca cgtacagcag tcccagaact cgatcgccgg
      541 aggccatcag tggcgagcac atcgcgctcc tgacgctctg agtcacgatc gagtgcccct
      601 tgaaccggct atccgatcgg gtgttgtccg agacaaccgc aacgcgctcc cgaatcacct
      661 tgtccacgat cgaacggggg acttgctgga actcccggtc acccaggcgg cttcgagaga
      721 tcgagggtac cagctctccc gtggtctcgt ttcggagcag gatcgagacc cgatcgacgt
      781 ccatgacctc gaacatcatg tccaccacgt tgcgaagcag cttgtcgaga tcgaactcgc
      841 ccgaaagctt ctgcgagata tccagcagca aagaaagctt tttggcctgg cgctcctcgg
      901 ctgagccggc cgctacccgg agctgaccga cacccgagcg ccggtctcgg ctggtgattc
      961 ccgtgggccc ggcgccactc acgttcagct ggcgcacgat ggtgtccccc gccactggag
     1021 gggcagcgaa ggggccgggc gagggccgaa cggcagccgc tgcactcggg ccaggcgctc
     1081 cggcgcccga cgggcgcatt tccttcaact gaaacaggac ttttccgaag gtgatcgaat
     1141 cgtttgcctg cagccgcccc gcagtgaccc gattgccgtt gatgcaggtt ccgttggagc
     1201 tgcccaggtc cttgacctga accccatcgg gtcccacggt gagctcggcg tggcgccgag
     1261 agatcgtggg atcgtaaata gcgatgtcac tgttgattcc ccggccaacc acgaggcttc
     1321 tgccgtgggg cagctcgaag ctctggtctc cggagaagct caccaagcga tagggcatat
     1381 tcggaatatg gcggaagaaa tggaaccagc ggaaggcggc ttacttcttc cgttgccggg
     1441 gcttgttctg cacagttcgt tccgccttct ccgccttctc cgccttctcc gccttctccg
     1501 ccttctccgc cttctccgcc ttctccgcct tctccgcctc cctcaccgcc agcgcaatcg
     1561 ccagcagcac cgcccgggcc ttggcctcgg tttcgtgcca ctcattcacc gggtcggaat
     1621 cggcgacgat gccagcgccg gcctggatcc acgcgcggtt acccctcatg acgcaggtgc
     1681 gaatggcaat ggcggtgtcg agggttcgtg cgccccagcc tacgtagcca acggcgccgg
     1741 cgtacggtcc ccgacgcacc ggctccagct cgtcgataat ctccatggcc cggaccttcg
     1801 gtgcacc
//
LOCUS       DASRPQ010000285         1127 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_971660, whole genome shotgun sequence.
ACCESSION   DASRPQ010000285 DASRPQ010000000
VERSION     DASRPQ010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1127
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_971660"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(10..1014)
                     /locus_tag="VFD73_03305"
     CDS             complement(10..1014)
                     /locus_tag="VFD73_03305"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase family protein"
                     /protein_id="HZI73045.1"
                     /translation="MAFMGGKSSGWVKRLAIAASATVLVPGLVNVAGGTATAHAFSNP
                     ALPIEYFEVPSQGMGRNIKVEFLSGGPTAHAVYLLDSMEAGDDLNGWDINTQAFDWFN
                     GSGMSLVMPVGGKSSFYSDWYGPAVGNNGTYTYKWETFLTQELPAWLSAHKGTPPTGN
                     AIVGFSMGGSSALVLAAYHPQQFIYAGSLSGFLNLSAPNEPGQVRIAMMWNGGFNPDA
                     MWGPPGDPAWARNDPTVQAGRLAANGTRLWIYCGNGTLSDPALASPDAPIAGLGFLEG
                     FAIDSNHAFVNAYIAAGGNNAVFNFPEGIHSWGYSGQQLQQMKPDIQRVLGATPTAQA
                     "
BASE COUNT          202 a          360 c          357 g          208 t
ORIGIN      
        1 ccctggtgct cacgcctgcg cggtcggagt ggcgccgagc acccgctgga tatcgggttt
       61 catctgctgc agttgttgac ccgagtaacc ccagctgtgg ataccctccg ggaagttgaa
      121 cacggcgttg ttcccgcctg cggcgatgta ggcgttgaca aatgcgtggt tggagtcgat
      181 tgcgaagccc tccaggaatc cgaggcccgc gatgggcgcg tcggggctgg ccagggcggg
      241 atcggaaagt gttccgttgc cgcaatagat ccaaaggcgg gtgccgttgg cggccagcct
      301 gccggcctgg acggtgggat cgttgcgggc ccaggccggg tcacccggcg gcccccacat
      361 cgcgtcggga ttgaagccgc cgttccacat catcgcgatc cgaacctggc caggttcgtt
      421 gggtgccgag agattcagaa agcccgacaa cgatccggcg tagatgaact gctgcgggtg
      481 ataggcggcc agcaccagtg ccgaggatcc gcccatcgag aaccccacga tcgcgttgcc
      541 ggtcggcggc gtgcccttat gcgcggagag ccaggccggc aattcctggg tcagaaaggt
      601 ctcccacttg taggtgtagg tcccgttgtt tccgacggcc ggcccgtacc agtcgctgta
      661 gaagctcgac ttgccgccga caggcatcac aagcgacatg cctgatccgt tgaaccagtc
      721 gaacgcctgg gtgttgatgt cccagccgtt gaggtcgtcg ccagcctcca tgctgtccaa
      781 caggtacacc gcatgggcgg tcggaccgcc gctgaggaat tcgaccttga tgttgcggcc
      841 catgccctgc gatggcacct cgaagtattc gatcggcagc gcggggtttg agaaggcatg
      901 tgctgtcgcg gtaccgcccg cgacattgac caaccccggc accagcacgg tcgcgctcgc
      961 tgcgatagcg agccgtttca cccagccgct ggacttccct cccatgaacg ccatggctcc
     1021 ccttcacctc ggccccgacc cccgagcgga cgatacgctc aacaggtgca tcaccagcca
     1081 cttttcggcc acggttggca attgttataa aaacaataag aatggcc
//
LOCUS       DASRPQ010000286         1009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4105244, whole genome shotgun sequence.
ACCESSION   DASRPQ010000286 DASRPQ010000000
VERSION     DASRPQ010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4105244"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..559
                     /locus_tag="VFD73_03310"
     CDS             <1..559
                     /locus_tag="VFD73_03310"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HZI73046.1"
                     /translation="AARGADLAAERGDEERAQRWRAGADEIKAEVLDKGVSGRGVFRQ
                     HYETDGLDASLLLLPIMGFLPPDDKRVRSTVLAIADELTQDGLVLRYRVEGTDTGFSG
                     DEGTFTICSFWLVTTLAMIGETDRARALCQKLLSFAGPLQLYAEEIDAATGEHLGNFP
                     QAFTHLALIEAVSLLIKSEQEKGAP"
BASE COUNT          186 a          334 c          315 g          174 t
ORIGIN      
        1 cgccgcgcgc ggcgcagatc tggccgctga gcggggcgat gaggaacgcg cccagcgctg
       61 gcgggcaggt gccgatgaga tcaaagccga ggtactggac aagggcgttt ccggccgggg
      121 cgtcttccgg cagcactacg agaccgatgg cctggacgcc tcgctgctgc tgctgcccat
      181 catgggattc ctgccgccgg acgacaaacg cgtccggtcg accgtgctgg ccatcgccga
      241 tgagctgacc caggacggcc tggtcctgcg gtaccgggtc gagggaaccg acaccgggtt
      301 ctccggcgac gagggaacgt tcaccatctg ctcgttctgg ctggtgacca cactggccat
      361 gatcggcgaa accgaccgcg cacgcgccct gtgccagaag ctgctgtcgt tcgccggtcc
      421 gctgcagctg tacgccgagg agatcgacgc cgcaaccggc gagcatctcg ggaatttccc
      481 gcaggccttc acccacctgg ccctgatcga agccgtgtcg ctgctcatca agtccgagca
      541 agaaaagggc gccccttagt ccggtaaggc gaaaaccaga cttacacttc ggcgaacacc
      601 gatacgcact gcctgggagg gagaatcggt gtggcaggcg gtgtcatcgg cactgccgtc
      661 ccgtagcccg cattgcgcac gacctcgacg tcggcgtcca tcatccgctg ggcgaactcc
      721 ccggatcatc gcgcgcagca agtccgggtt cgccgatgcc agcgtctcct cgactgctcc
      781 gggaaccact tgcgggaacc accgtgcaaa ctctcccagg cacgccaggg catctccagg
      841 catggttttc gcagttcaga cccatgaacc gatccgggga gctgggcgta ttcctcgccg
      901 ttttccgcct tacaagcgag gggtcactgg ttcgaaccca gttgcgtcca ccaagtttgc
      961 gcagctagat gacctttttt gaaacgataa tcggagactc gggaaccat
//
LOCUS       DASRPQ010000287         2556 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2224753, whole genome shotgun sequence.
ACCESSION   DASRPQ010000287 DASRPQ010000000
VERSION     DASRPQ010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2556
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2224753"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..860
                     /locus_tag="VFD73_03315"
     CDS             <1..860
                     /locus_tag="VFD73_03315"
                     /inference="COORDINATES: protein motif:HMM:NF016354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF512 domain-containing protein"
                     /protein_id="HZI73047.1"
                     /translation="LYVSVHATDPTIRRYLLRNPTAPEILPQLQDFAEHGIEFHTQIV
                     MSPGVNDGPVLRQTLSDLYDFGSSILSCSVVPVGLTEFSKHHLVREPTAEECRAAVAL
                     VEQHAQRCRRERGASWAFGADELYLRANLDLPPAEHYDGFDQVENGVGAVRWLQQRIE
                     SAPLALAAWADRRIGVVTGTAMAKLMPLVLRPLEESTGSRFELIPVVNSLFGSTVTTA
                     GLLPGAALQEALRGRTDLEMALLPGESLNDDDLFIDGISLELLQATLPMKLYPSKDFV
                     DVLEAPLAA"
     gene            857..2179
                     /gene="der"
                     /locus_tag="VFD73_03320"
     CDS             857..2179
                     /gene="der"
                     /locus_tag="VFD73_03320"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HZI73048.1"
                     /translation="MSKPTVAIVGRPNVGKSTLFNRILGGRPAIVSERPGTTRDRHFG
                     DAEWQGRRFWLVDTGGLIPGSHDSLDRAIEKQVEFALAESDVIIFVVDGREGLHPLDQ
                     AIAERLRRAARPVLLAVNKLDNLEHSTEQFQFYALGFGDPVGVSAGVGKGSGDLLDVV
                     VSRLPPFDPEESADVINVAVVGRPNVGKSSLVNRLLGEERHVVAAQAGTTRDAIDSVL
                     RFRGKILNFIDTAGLRRRSKVEDDLEFYSTLRTERAIERAHVCVLVVDATLGMHNQDL
                     RIATEVWERGAALIVVVNKWDLVAEKSANTAREGQDAQIAKAPFLRYVPFVYVSALTG
                     QRVRKILDLILEVEEGRQQRVPTAEVNKVLADLVQRNAPPQKPGEEVKLLYASQIGTA
                     PPTLAIVSNRPDEVPESYQRYLVHGFRQAWPFPGSPLRLKFTSKGSRR"
     gene            2179..>2556
                     /locus_tag="VFD73_03325"
     CDS             2179..>2556
                     /locus_tag="VFD73_03325"
                     /EC_number="2.3.1.275"
                     /inference="COORDINATES: protein motif:HMM:NF014690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043772 - acyl-phosphate
                     glycerol-3-phosphate acyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate acyltransferase"
                     /protein_id="HZI73049.1"
                     /translation="MLAALGWLVASYLLGAVPTSHLVSRSIAHIDLRQHGSGNLGATN
                     LYRVLGWKYAVPVALFDMAKGAIPVIVFARQVSRSELFAISCGIAAILGHVFSVFVRF
                     KGGKGVATAAGVMLGLTPVALGVA"
BASE COUNT          468 a          781 c          794 g          513 t
ORIGIN      
        1 ccttatatgt ctcggtccac gcgaccgacc caaccatccg tcggtacctc ctcaggaatc
       61 caacggctcc ggaaatcctg ccgcaactgc aggactttgc cgaacacggg atcgagttcc
      121 acactcagat cgtgatgtca ccaggagtca acgacggccc cgtgctgcga cagacgctgt
      181 ctgacctcta cgacttcggc tcctccattc tgagttgctc tgtcgtgccg gtcgggttaa
      241 ccgaattctc caagcatcac ctggtccgcg aacccaccgc cgaggaatgt cgggcagcag
      301 tggcgctggt ggagcaacac gcccagcggt gtcgacgaga gaggggagcg tcctgggctt
      361 tcggcgccga cgagctctat ctccgggcga acttggatct gcctcccgcc gagcactatg
      421 atggcttcga tcaggtggag aacggggtcg gggcagtgcg ctggctgcag caacggatag
      481 agagcgcccc actcgctctc gcagcatggg ccgaccggcg aatcggcgtg gtgacgggaa
      541 cggcgatggc caagctgatg cccttggtgc tccgtccgct ggaggaaagc accgggtccc
      601 gtttcgagtt gataccagtg gtgaactcct tgttcggatc caccgtcacg accgccgggt
      661 tgctccccgg cgcggcactt caggaggcgc tccgcggccg aaccgacctc gagatggcgc
      721 tcctgcccgg tgaatcgctc aatgacgacg acctcttcat agatgggatc agcttggagc
      781 tgctccaggc cacgctgccc atgaagctct atccgtcgaa ggacttcgtc gacgtgctcg
      841 aagcgccgct cgctgcatga gcaaacccac cgttgccatc gtcggccgcc ccaacgtagg
      901 caaatccacc ctcttcaacc gcattctcgg cgggagaccg gccatcgttt ccgagcgacc
      961 cggcaccacc cgtgaccggc atttcggtga cgccgaatgg cagggccggc ggttctggct
     1021 cgtcgatacc ggcgggttga ttccggggtc ccacgattcc ttggatcgcg ccatcgagaa
     1081 gcaggtggag ttcgccctgg ccgaatccga tgtcatcatc ttcgtggtcg atggaaggga
     1141 aggcctgcac ccgctcgatc aggcgatcgc cgagcggttg cggagggcag cgaggccggt
     1201 cctcctggcc gtgaacaagc tcgacaactt ggagcacagt actgaacaat ttcagttcta
     1261 tgctctgggt ttcggtgacc ccgtaggtgt gagcgcggga gttggaaagg ggagcggtga
     1321 tcttctggat gtcgttgttt cgcggcttcc tcctttcgac ccggaagaat ctgcggacgt
     1381 catcaatgtg gccgtggtgg gccgccccaa cgtgggaaag tcttcgctgg tgaaccggct
     1441 tctcggcgag gagcgtcacg tggttgcagc gcaggcagga actactcggg atgcgatcga
     1501 ctctgtcttg cgctttcgag gtaaaatact caacttcatt gacaccgcag gcttacggcg
     1561 tcgctctaaa gtagaagatg acctggaatt ctactctacg ctcagaaccg agcgagccat
     1621 cgagcgagcg cacgtctgtg tgctggtggt cgacgccaca ctgggaatgc ataaccagga
     1681 tcttcggatt gcaaccgagg tgtgggaacg cggcgccgcc ctgatcgtgg tggtgaacaa
     1741 atgggatttg gtagccgaga agagcgccaa cactgcgcgt gagggacaag atgcgcaaat
     1801 cgccaaagca ccttttctgc gctacgtccc cttcgtatac gtctcagcgc tgaccgggca
     1861 gcgggtccgg aaaattctcg atctgattct cgaggtggag gaaggccggc agcaacgcgt
     1921 cccaaccgcc gaggtgaata aggtgctggc cgatctggtc cagcggaatg cgccaccgca
     1981 gaaaccaggt gaggaggtca agctgttgta tgcgtcccag atcggtaccg ctccccctac
     2041 gctggccatc gtgagcaatc gccccgacga ggttcctgag tcctaccagc gatatctcgt
     2101 ccacgggttt cggcaggcgt ggccgtttcc cggatctccc cttcgactca agttcaccag
     2161 caagggctcg cgacgctgat gcttgccgca ctcggctggc tcgtggcgtc ctacctgctc
     2221 ggagcggttc ccaccagtca tctcgtcagt cgcagcatcg cccatatcga cttgcgtcag
     2281 catggcagcg ggaatctggg tgcgaccaat ctctatcgtg tccttggctg gaaatacgcg
     2341 gttccggtgg cgctgttcga tatggcgaaa ggcgccatcc cggtcatcgt ctttgcccgt
     2401 caggtctccc gctcagagct cttcgccatc agctgcggca tcgctgccat cctgggtcac
     2461 gttttctcgg tgttcgtgcg cttcaaagga ggaaagggtg tcgccacggc agcaggggtg
     2521 atgctcgggt tgacgccggt ggccctggga gtggcg
//
LOCUS       DASRPQ010000288         1176 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3479077, whole genome shotgun sequence.
ACCESSION   DASRPQ010000288 DASRPQ010000000
VERSION     DASRPQ010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1176
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3479077"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..291)
                     /locus_tag="VFD73_03330"
     CDS             complement(<1..291)
                     /locus_tag="VFD73_03330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73050.1"
                     /translation="MRVLSRSKACCHSADAGRTNRERSRTARIQPPNNRSQQAIAPTS
                     QAATTQGSSGSDNTRGTPLGNHAATLVPAGATVEAGPAKFMEPETGTEAAAFI"
     gene            173..>1176
                     /locus_tag="VFD73_03335"
     CDS             173..>1176
                     /locus_tag="VFD73_03335"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HZI73051.1"
                     /translation="MACWLRLLGGWIRAVRLRSRFVRPASAEWQQAFDRLKTRIRVSL
                     PVRLVVSSLVQAPAVVGWLRPVVLMPVGALTGLPLDHIEALLLHELAHIRRHDYLVNV
                     LQSMVETLLFYHPAVWWISGHIRTERELCCDDAAVSVTGDVLTYARALAGLESARPTN
                     LNPVMAASGGSLAHRIARLLGQSRPVPRTLAGPAIVTVAMLLAVTALAVFGQPVARPK
                     FEAASIKTSEETNFRMVRPLPGRLTADATVRLLVQNAYTVQPFQVVGGPAWIDAEQYE
                     IEAKADGSANRAQMFLMLQSLLEDRFQLKTHRETRELPVYALVPARSGPKLPLPKDGS
                     "
BASE COUNT          177 a          374 c          371 g          254 t
ORIGIN      
        1 gatgaacgcg gcggcctcgg tcccggtttc gggctccatg aatttcgcag ggcccgcttc
       61 aaccgtggcg cccgccggga ccagtgtggc cgcatggttg cccagcggtg tcccgcgtgt
      121 gttgtccgag ccgctgctgc cttgggtagt tgccgcctgg ctcgtgggtg cgatggcctg
      181 ctggcttcgg ttgttgggcg gctggatccg ggcagtgcgg cttcgctcgc ggttcgtccg
      241 tcccgcgtcg gcggaatggc agcaggcttt cgaccggctc aaaacccgca ttcgcgtctc
      301 actaccggtc cgcttggtcg tatcctcact ggtgcaagcg cctgcggtgg tgggctggct
      361 tcgtcccgtt gtgctgatgc cggtcggtgc gctcaccggt ttgcccctcg accatataga
      421 agcgcttctc ctgcatgagc tggcgcacat ccgccgccac gactatctgg tcaacgtctt
      481 gcagagcatg gtcgagacct tgctgttcta ccatcccgcg gtttggtgga tatcgggcca
      541 catccgcacg gaacgcgagc tgtgttgcga cgacgctgcc gtttccgtca ccggtgacgt
      601 tctcacttac gcccgcgcac tggcagggtt ggaatcggcg cgcccgacaa atcttaaccc
      661 ggttatggcc gcgagcggtg gttctctcgc acaccgaatc gccagattac tgggccagtc
      721 gcgtccggtt ccccggactc tcgccgggcc ggcaatcgtt accgtcgcga tgctcctggc
      781 tgtcacggcc ctggccgtat tcgggcagcc cgtggcccgg cctaaatttg aagctgcctc
      841 catcaaaact tcggaggaga ctaatttcag gatggtgcgc cctcttccag gccgcctgac
      901 tgcggacgct accgtgagac tgctggtgca gaatgcctac acggtgcaac cgtttcaagt
      961 cgtgggtggt ccggcctgga ttgatgccga gcagtatgaa atcgaggcca aagccgatgg
     1021 cagcgccaat cgcgcccaga tgtttctcat gttgcaatcg ctgctcgagg accgcttcca
     1081 gttgaagacc catcgcgaaa ccagggagct cccggtctat gccctggtac ctgcaagaag
     1141 tggccctaag ttgccgctgc cgaaggacgg gagctg
//
LOCUS       DASRPQ010000289         2265 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1598931, whole genome shotgun sequence.
ACCESSION   DASRPQ010000289 DASRPQ010000000
VERSION     DASRPQ010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2265
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1598931"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..406)
                     /locus_tag="VFD73_03340"
     CDS             complement(158..406)
                     /locus_tag="VFD73_03340"
                     /inference="COORDINATES: protein motif:HMM:NF003817.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HZI73052.1"
                     /translation="MAPIHCSRCGQDKERMAFQPFQNDIGRRAYEQICATCWAEWLKM
                     QQQLINHYGLNLREPKAKEFLFQNMEQFLFATPRPVDG"
     gene            complement(475..756)
                     /locus_tag="VFD73_03345"
     CDS             complement(475..756)
                     /locus_tag="VFD73_03345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73053.1"
                     /translation="MLQLLITLAAGAIGFIMARNFVRRRLRFVDAIHSPFAPFVAGAA
                     AALIASPTVLLPVMTVTTAVAFGVGTGLGTARGARAIRELDHIPRRLAP"
     gene            917..1348
                     /locus_tag="VFD73_03350"
     CDS             917..1348
                     /locus_tag="VFD73_03350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73054.1"
                     /translation="MPRHPTVLVPNIGPMDHAWDLLGEWQAEFELPETESPVHGTVTF
                     RSWTDAELQLDPIEAAIAGIPSSVPLERASEIHLTDAGGGALQWVLHAPSTNWSLQAT
                     LWPGSLHLFVHDADDDEEQLYRARATRDQEYYRRKYPLDAK"
     gene            1435..1836
                     /locus_tag="VFD73_03355"
     CDS             1435..1836
                     /locus_tag="VFD73_03355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73055.1"
                     /translation="MEVRTLELPLKGFGAPPTLAHVEFLSLSPVDRFKRAGMILGACL
                     LAAIIFIPVPLVHLIIVPGALILGFVFALIRLQQREIFRSVVGRCPFCGTEQRFTALG
                     RFRIPKALTCSSCRRQVVLEEPTSEAPRSPT"
     gene            complement(1805..>2265)
                     /locus_tag="VFD73_03360"
     CDS             complement(1805..>2265)
                     /locus_tag="VFD73_03360"
                     /inference="COORDINATES: protein motif:HMM:NF020130.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /protein_id="HZI73056.1"
                     /translation="LAFDLHAEGAHAEKLWVDAPGSMYHPRVSATQIEAGRHYLEMDG
                     REVFRHAVVRMPESVRAVLAKAGEDIADLKLLLAHQANLRISEVMQKELGLGDDQVYN
                     NIMWYGNTTAATIPIALDECVRGGRLQRGDLLVLTAFGSGFMWGSAALRW"
BASE COUNT          415 a          674 c          733 g          443 t
ORIGIN      
        1 agacgacgct gccggcgctg gaccttcgcg agctgtctct ggatttcggc tggatactga
       61 gagctcggaa gggaagtgaa tggcggatcg gtcttaccga agacctggag cccggcgggc
      121 cggcggtgga tttggtgatc cggttgggcc ggaggttcta gccgtcgacc ggccgcggag
      181 tggcaaagag gaactgctcc atgttctgga acaggaactc cttggctttg ggctctcgaa
      241 ggttgagtcc gtagtggttg atgagttgct gctgcatctt cagccattcg gcccagcagg
      301 tcgcacagat ctgctcatag gcacgacggc ctatatcgtt ctgaaagggc tggaacgcca
      361 tgcgctcttt gtcctggccg cagcggctgc agtgtatggg tgccatggcg gcaaaatagg
      421 gacgtcggga aatgtgatcc agtctacggg caacgccgga acaaagggct atgatcaggg
      481 agcgagtcgc ctcgggatgt gatccagctc tcgaattgcc cgggcgccgc gtgcggtacc
      541 tagtccagtg ccaaccccga atgccaccgc agtggtgacg gtcatcaccg gcaggagcac
      601 tgtcggagag gcgatcaggg cggcagcagc gccggccacg aatggcgcaa aaggcgagtg
      661 gatggcgtca acgaagcgga ggcggcggcg cacaaaattg cgcgccatga tgaagccgat
      721 ggcacccgcg gccaaggtaa tgaggagttg aagcatcgct gttccttgct gagaggcaga
      781 ttgttgcgtt acagtacgaa acgctgtgag aaaagattca ccactgagct atgttacgca
      841 gaaatgtttg tggtacgcga atcgcggacg atttcgtgtc cttggctaag ctctttcacc
      901 cggaaggagc ctaaagatgc ctagacatcc aaccgttctg gtaccgaaca tcggtcccat
      961 ggatcatgcc tgggacctgc tgggtgagtg gcaggccgag ttcgagctcc ccgagaccga
     1021 gtcgccggtt cacggaacgg tgacctttcg ctcgtggacg gatgcggagc tgcagctcga
     1081 tccgatcgag gcggcgatcg ccggcatccc ctccagtgtt ccgctggagc gggccagtga
     1141 gatccacctg acggatgcag gcggcggggc gctccagtgg gtgctgcacg ccccgtcgac
     1201 caactggtcc ttgcaggcaa cgctctggcc cggctcgctg cacctgttcg tgcatgacgc
     1261 ggatgacgac gaagagcagc tctatcgggc ccgcgccacc agggatcagg agtactatcg
     1321 caggaagtac ccgctcgacg cgaagtagga tcagtacgcc cgtcatcagc aatggtgacg
     1381 ggcatcgtgt ttgtcccgct ttacatgggg acccatacat ttccgggagg atttgtggaa
     1441 gtccgaaccc tggagttgcc gctcaaaggc tttggcgctc cgccgacgct ggcccacgtc
     1501 gagtttctca gcctgtcccc ggtggaccgc ttcaagcggg cggggatgat tttgggcgcc
     1561 tgtctcctgg ccgcgatcat cttcatcccg gtgccgctgg ttcacctcat catcgtgccg
     1621 ggtgccctga tcctgggctt cgtgtttgcc ctgatccggc tgcagcagcg ggagatcttc
     1681 cgctcggtgg tgggacgctg ccccttctgt ggaaccgagc agcgcttcac cgcgctgggg
     1741 cggttccgga ttcccaaggc gctcacttgc tcatcgtgcc ggcggcaggt ggttctggag
     1801 gagcctacca gcgaagcgcc gcgctccccc acatgaaccc cgatccaaat gcggtgagga
     1861 ccaggagatc gcctcgctga agccggccgc cccggacgca ctcgtccagg gcaatgggaa
     1921 ttgtggccgc ggtggtgttc ccgtaccaca tgatgttgtt gtacacctgg tcgtccccta
     1981 ggcccagctc cttctgcatc acctccgaga tccgaagatt ggcctggtgc gccagcagca
     2041 gcttgagatc ggcaatatcc tctcccgctt tggccagcac cgctcgcacc gactccggca
     2101 tccggacgac ggcgtgacgg aacacctccc gaccatccat ttccaggtag tgccggccgg
     2161 cctcgatctg ggtggccgac acgcgtgggt ggtacatcga gcctggagca tcgacccaca
     2221 gcttttcagc atgcgcccct tcggcgtgga gatcgaatgc cagaa
//
LOCUS       DASRPQ010000290         1626 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4105738, whole genome shotgun sequence.
ACCESSION   DASRPQ010000290 DASRPQ010000000
VERSION     DASRPQ010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4105738"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          258 a          508 c          564 g          296 t
ORIGIN      
        1 tggaaagatt cgcctggtcg gcatttttga atatcagtgc ccaatgttcc ctcatcaacc
       61 gaaccttgag aagcacctcg gttgcggcct gcagatggag aatggcatac ttcaggtctc
      121 gctgatttgg ctcgccgcgc aggtgttcca cgacgctctc aagatagtcg agaccgttcg
      181 gcaggggtgg gaacgagaga ggctgcggca cggggtcaca gcgtacgcga tcagagtgat
      241 ctgtccgagg tagcggggct gggctcaagt atggttcgcg cacactggtg cacggcagtc
      301 tgacggcctt tgatcggcaa ggctgcctta aggtagcttc cagactgtcg gctattccac
      361 gtagctgccg aacgcgagcg cggtgaacac gatgctcagg gctgtcgagc ttgctggtcg
      421 gctcgatgat ccgcgccagc accggctgcc ggaacgcacg ccccaactcc cggcggcctg
      481 actcttgcca gcctttgtga tcttgaactg gggtgcgtgc tgacctgcag gttggtgcgt
      541 ggtgtgcgcg gattggtgcg ctaagcctgg ctcgtagggt cggggtcgtg gcgtttgagc
      601 gtgtcgggtg ccagaactcg gccatggtgc ctgacgagcg gtttcaaagc ggaagcgcgt
      661 cggagctaaa cttccgctgg acgccgcagg ttcacctggc tcaaacccgg tgttcgggcg
      721 gcggccatcc gggctggtga cgataagccc acgattcccc ttctgacctg cgacgagtgc
      781 gccgtcgagc tgacgggcga ggtctgggtg gtgcgtgagc tcctggcgcg cggctcgggt
      841 gggcgccgcg gcacgaccga tccgcgatcc aggcgcacgg ttacggtgtg ccagacctgc
      901 tggggccgcc tcgcccgcgg cgcccgctcc gttgacctgc cctgcggggt ctgcggacgg
      961 atccgccact gcgacgcctc gagcaacttc ggcgctcgtt tccaagccct gcacgcctgc
     1021 tccccccaat gcgcccgcgg cgcccgccgc ggccccgacc gcatcgtcat gaccctgcgc
     1081 tgccagtggt gcggcgaggc cttctccgct atcaggcgcg acgcgcgctt ctgctcggtt
     1141 gcccaccgca aagccgccca ccaggcgagg agctctacct gacccggtgg ttcgtgccca
     1201 gcgtcggggc tgggcagtgt cgtcgccccg gtgggggtcg tggtcggtga gtggccaggg
     1261 ccgttcggag cggctgcggc gcagcgtggg cgacctcgga gcgtgaaagc aaccctcgcc
     1321 ccccaggagg gagatgggct gagcgacgcg atcagaatgc catgttccgc gctgcgtcgc
     1381 ttcctgtcgg cctggaggta gatggccgcg tgctccacat gtgatgcgtg gtgatcgtga
     1441 caataggaag gcaggcccgc accccggctg gaaccgctat cggcgccggt tccgagcgag
     1501 gggatgggat gcgggccacc caatcacaag gtatggctcg ctactaagca accgctgaga
     1561 tttgggccaa tcaggacaaa gagaaagact gcgactgccg acccgtaccg cagccgacga
     1621 tgcgat
//
LOCUS       DASRPQ010000291         2540 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2225023, whole genome shotgun sequence.
ACCESSION   DASRPQ010000291 DASRPQ010000000
VERSION     DASRPQ010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2540
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2225023"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..637
                     /locus_tag="VFD73_03365"
     CDS             <1..637
                     /locus_tag="VFD73_03365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HZI73057.1"
                     /translation="GGYLKGGSVYHSQTGAAVFTGVPGLRVVCPATSLDANGLLRTAI
                     RCEDPVLFLEHKHLYRQTYNKAPNPGPNFMIPFGKAKVVREGSDLTVVTYGAVVQRAI
                     LAAKAVEDERGISVEVIDLRSLSPVDWDTIYQSVRKTSRVIVAYEDSFSWGYGSEIAA
                     RIADEAFAYLDAPVKRVAATDTFVAYAPELEDVILPQVDDLKEAITDLLAF"
     gene            complement(1142..>2540)
                     /locus_tag="VFD73_03370"
     CDS             complement(1142..>2540)
                     /locus_tag="VFD73_03370"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2TM domain-containing protein"
                     /protein_id="HZI73058.1"
                     /translation="TDFGIAKALSTGTGATLTGVGVAIGTPAFMSPEQAAGESDIDGR
                     SDLYSLGVVSYQMLTGELPFSAPSVAGLLMKQITEPAPDLRIKRPDIPEDLALAVARC
                     LEKDPSNRWPTADALRRALEARTVNGYQPTGLGWKAAERSFSRSASRPAGGRSPLERP
                     RGQPRRSPGLPEVRRPKELNRAQRRDARRGRSDQQIPDTGEPKIIQRVRGQFASWAAV
                     TAGCMGINVATGIEHPWFLFPMFGMGIGLLRNYATLWQAGYSWRDVLSRPPAPDSLET
                     TMVKGKAARPLPSPTAEEFGAQLPAILQVYGDRLAILKLMAKLPVSERKMLPEIQQTA
                     DALYARATDLARTLHAMDTNLDSQEVAAIDERIAGIAREPDDPERARRLGLLQRQRQT
                     ITDLRDRRSQVASHLESCVLAMQNVRFDLLRLRSAGVAAVLDDLTQATQQAKALSRDV
                     DNVIAAAGEIREVMK"
BASE COUNT          461 a          790 c          786 g          503 t
ORIGIN      
        1 tggagggtat ctcaagggcg gttcggtata tcactcgcag acgggagccg ccgtgtttac
       61 cggtgttccc gggcttcggg tggtctgccc tgccacatcg ctcgacgcca acggtctgct
      121 ccgcaccgcc atccgctgcg aagatccggt gctgttcctg gagcacaagc acctgtaccg
      181 gcagacctac aacaaggcac cgaaccccgg ccccaatttc atgatcccgt tcgggaaggc
      241 gaaggtcgtg cgggaagggt ccgatctcac ggttgtgacc tacggcgcag tggtgcagcg
      301 ggcgatcctg gcggcgaagg ctgtcgagga cgagcgcggg atcagcgtgg aggtcataga
      361 ccttcgttca ctttctcccg tggattggga cacgatctat caatcggttc ggaagaccag
      421 ccgggtgatc gtggcctacg aggactcgtt ttcctggggg tacgggtcgg agattgcggc
      481 gcgaatcgcc gacgaggcgt ttgcctatct cgatgcgccg gtcaagcgcg tcgcggccac
      541 cgataccttc gtggcctacg cccccgagct ggaggacgta atcctgccac aggtcgacga
      601 cctgaaagaa gcgataaccg acctgctcgc gttttaaaaa aatcaccaca gaggcacaga
      661 ggacacagag ttacgacttc acttcgatct ccggttcaac ttgccgcgta gatcagaaac
      721 gattttgatt tttctgaacc gcttaccgca agaacaacaa aagaatctga ctcgaagcct
      781 gtggcgctgt gggcgggctc taactattga cgttacctct gcgtcctctg tgcctttgtg
      841 gtgaatctct aaaagcctct gtggtgaatt tctaaagaag aacggggccc tatggcaatg
      901 tggggccccg ttgcgctcta gcgcgcagca atcctgctac gtggcacgcg gatcgatccg
      961 cggcacaatt ccaactactt gtcctgatga gagatgatta ggtgtgctcg gttcatacgc
     1021 cggcgcacgc ttcgcgggta cccgagtctg gacgagcgcc gaagctcctc ccttcgagcg
     1081 gagtgcaata tatgactagg aaattggacc ggcgctgtca atccagaaaa tattccggca
     1141 gctacttcat gacttcgcgg atctctcccg ccgcagcaat cacattgtcg acatcgcgcg
     1201 aaagagcctt ggcctgctgg gtggcttgag tcagatcgtc cagcactgcg gccactcctg
     1261 ccgagcggag ccgcagcaag tcgaatcgaa cgttctgcat ggcgaggaca cacgactcga
     1321 gatggctggc gacctggctc cggcggtccc ggagatcggt aatggtttgg cgttgccgct
     1381 gcagcaggcc caggcgccgc gcccgttccg gatcgtctgg ctcccgggca atgccggcaa
     1441 tccgctcgtc gatggccgcc acttcctgag aatccagatt ggtgtccatc gcgtgcaggg
     1501 tccgcgccag atccgtggcg cgggcataga gcgcatcggc ggtctgctgg atttccggca
     1561 gcatcttccg ttctgagacc ggcagcttgg ccatcagctt gagaatggca agccgatcgc
     1621 cgtacacctg gaggatcgcc ggaagctggg ctccgaactc ttctgccgtc gggctcggga
     1681 gcggccgggc agcctttccc ttgaccattg tggtttccag tgagtcgggt gcaggcggac
     1741 ggctcaagac atctctccag ctatacccgg cctgccatag cgtggcgtag ttacgcagga
     1801 gtccgatccc catgccgaac atggggaaca agaaccaggg gtgctcgatc ccggtggcca
     1861 cgttgatacc catgcacccc gcggtaaccg cagcccagct ggcgaactga ccccggactc
     1921 tctggatgat cttgggctcg ccggtatcgg ggatctgctg gtcactccga ccgcgacggg
     1981 cgtcgcgcct ctgggcccgg ttcagctcct tgggtcgccg aacctccggc agcccgggcg
     2041 accttcgtgg ctgaccccgc ggccgctcga gtggcgaccg tccccccgcc ggtcggctcg
     2101 cgcttctgga gaacgagcgc tcggccgcct tccagcccag accggtcggc tggtatccgt
     2161 tcacggttct ggcctcaagg gctcggcgca acgcatccgc ggttggccat ctattagaag
     2221 gatctttttc cagacaacgg gcaaccgcca gcgccaagtc ctccgggatg tctggtcgct
     2281 tgatccggag atcgggggcg ggctcggtga tctgtttcat caggaggccg gcaaccgagg
     2341 gagcgctgaa cggcagctct ccggtcaaca tctggtagct gaccacaccc aggctgtaca
     2401 agtcggagcg gccgtcgata tcgctctccc cggccgcctg ttccgggctc atgaacgctg
     2461 gagtgccgat ggctaccccc acgcccgtga gggtggctcc cgttccggtc gaaagcgcct
     2521 tggcgatacc gaaatcggtc
//
LOCUS       DASRPQ010000292         4378 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4105960, whole genome shotgun sequence.
ACCESSION   DASRPQ010000292 DASRPQ010000000
VERSION     DASRPQ010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4378
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4105960"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1380
                     /locus_tag="VFD73_03375"
     CDS             <1..1380
                     /locus_tag="VFD73_03375"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HZI73059.1"
                     /translation="RKDLRQGNSTVGLIATAVNRHQDDAALSSLLRGSAYIFGADCTN
                     SWGNRTWSLDGSVGVSTVRGTTNAIALTQQSSARYYQRPDATSFEFDPSRTSLSGYAY
                     QWALAKNSGRHWLGGLVYQETSPGFEANDLGFQADASQRGVSSALEYHERKPGRLLRN
                     YGIFPFTNHAWNFDGNLVFGSYGLILEGQLRNFWDFELRGDYAPPIYDDRLTRGGPLA
                     RQPTFGDVRLTLNSDTRKTTRLTLNFTQSWTAAQEHQTKADLTLSMRPLPALHLSLGP
                     ALLRNRTLSQYVTSVADPVAARTYGVRYVFATLSQSEVSMITRLDWTFTPTLSLQLFV
                     QPLISAGDFTDLKEFVAPRRYDFAVYGKDKGTVTPSPDGAVIDPGDGGSSFTVPNQNF
                     TIRSLRGNAVLRWEWRPGSTLFLVWQQNRDNDAEFGNLRLGRDLDAVFSGGDARNVLA
                     VKASYWLSW"
     gene            complement(1399..2043)
                     /locus_tag="VFD73_03380"
     CDS             complement(1399..2043)
                     /locus_tag="VFD73_03380"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase-like oxidoreductase"
                     /protein_id="HZI73060.1"
                     /translation="MTVNAKATPAQRLPPGQVLTKKWPVLTYGETPRFDPATWNFRCF
                     GLVRQPVTWSWSEFLALPRFEVTSDIHCVTRWSRFDNRWEGVSIAEVLRRVEPLPEAR
                     AVVIHADPDYTTNLLLSELNVEDALLALKHDGADLPADHGGPSRLVVPRLYFWKSAKW
                     VRALEFLDHNAPGFWEMNGYHLRGDPWSEERYAAQETDAMQRMRAESARRRRSR"
     gene            complement(2083..2985)
                     /locus_tag="VFD73_03385"
     CDS             complement(2083..2985)
                     /locus_tag="VFD73_03385"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HZI73061.1"
                     /translation="MRIFVTGATGVIGRRVVPVLLRNGHQVTAAGRSLSRLQTLERIG
                     AAVVALDLFGSSSVRASIAGHDVVINLATHVPTGVKTFLPGAWKQNDRIRREASALLV
                     DEAIRAGAQVYLQESFVTYPESGDRWVTEEVSPEPPSYNRSTLDAEASALRFAREGGR
                     GVVLRFAYFYGPNDDFTATLAASVRRGWLPIPGQPQGYFSMVTHDDAAAAVIAALAAP
                     SGIYNVVEDEPLTRRLIGDVLARHLGVSPPRLLPPWVAHLAGSVGEMLSRSIRMSNAK
                     LKHAVGWAPKYPSLKEGLLAAREN"
     gene            complement(3038..3832)
                     /locus_tag="VFD73_03390"
     CDS             complement(3038..3832)
                     /locus_tag="VFD73_03390"
                     /inference="COORDINATES: protein motif:HMM:NF021465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2182 domain-containing protein"
                     /protein_id="HZI73062.1"
                     /translation="MSSAASSPGWFQKTLRRDRLPLVAGLLGITALAWLYIVQIGRTM
                     SPHPGTAMPMAGDADLPGLAMLVPMWIVMMVAMMVPSASPTILLFATVARGRQARGVP
                     TASTAVFTLGYLLVWAFYATVAAVLQWELHRLALLSPAMVSARPWLGGGLLIAAGIYQ
                     WLPVKNSCLSHCRSPLGFLSAEWREGTWGALVMGIRHGSFCVGCCALLMTLLFVAGVM
                     NLLWVAAIAIFVLIEKLAPAGKAVGRVIGFAMVVWGVWVIAAPGFH"
     gene            complement(3842..>4378)
                     /locus_tag="VFD73_03395"
     CDS             complement(3842..>4378)
                     /locus_tag="VFD73_03395"
                     /inference="COORDINATES: protein motif:HMM:NF018712.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1326 domain-containing protein"
                     /protein_id="HZI73063.1"
                     /translation="NSKSGGCDAVIGGEVKEGKYGDVDLKGVRYIVACSYPKAIHEGN
                     GKVAVFIDQKASDKQAEAITMILSGQAGGMPWEALAGTIAVLEGPVRKPIDMQVNGTK
                     SGYKIPGILEMRQTPIRDGVSGQDKEVQIVYPKGGFFWNKADIATTDVLEVNYGPVKF
                     RHGGGFASYSTTTWSNQR"
BASE COUNT          875 a         1378 c         1316 g          809 t
ORIGIN      
        1 cggaaagatc tgcgacaagg aaattcgacc gtgggactga ttgccaccgc ggtaaaccga
       61 caccaggacg acgcggcgct atcgtcgctg ctccggggca gcgcctacat cttcggagcc
      121 gattgcacca actcgtgggg caaccggacc tggtcgctgg acgggtcggt cggcgtgagc
      181 accgtccgag gcacgaccaa cgcgattgcg ctcacccagc aatcgagcgc ccgatactac
      241 cagcgcccgg acgccaccag cttcgagttc gatcccagcc gcacgagcct gtcaggctat
      301 gcctaccagt gggccctcgc gaagaacagc ggccgccact ggctgggagg attggtgtac
      361 caagagacca gcccaggctt cgaggcgaac gaccttggtt tccaggcgga tgcgtcgcag
      421 cgcggcgtct cgagcgcttt ggagtatcac gagaggaagc cgggtcggct gctccgcaat
      481 tatggaatct tcccgtttac gaaccatgcc tggaacttcg acggaaattt ggtcttcggg
      541 tcctacggcc tgattctgga aggacagctt cgtaacttct gggatttcga gttgcggggt
      601 gattacgcgc ctccgatata cgacgatcgg ctcacccgcg gcggtccact cgcccggcaa
      661 ccgacgtttg gagacgtgag actgacgttg aactccgaca cccggaagac aacgcggctg
      721 actctcaact tcactcagtc gtggactgcg gcccaggagc atcagaccaa ggccgatctc
      781 acattgagta tgcgcccgct ccctgccctg catctcagcc tcgggccggc gttgctgagg
      841 aaccgcacac tctcccaata cgtcacgagc gtagccgatc cggtagcggc gaggacctac
      901 ggcgtgcgct acgtgtttgc caccttgagt cagtccgaag tctccatgat tacccggctg
      961 gactggacct tcacgccaac gctcagtctc cagctctttg ttcaaccatt gatctcggcg
     1021 ggagatttca ccgacctcaa ggaattcgtg gcgccgcgaa ggtacgattt tgcggtgtat
     1081 ggcaaggaca aagggactgt aacgccgtcc cctgacggcg ccgtgatcga ccccggagac
     1141 ggtggctcgt catttaccgt tccgaatcag aacttcacga tccgatcgct cagaggaaac
     1201 gcggtgcttc ggtgggagtg gcgtcccggt tcgacgttgt ttctggtctg gcagcagaat
     1261 cgcgacaacg acgcggagtt cggtaatctg cggctgggcc gcgatctcga tgccgtcttt
     1321 agcggaggag acgctcggaa cgtgctggct gttaaagcga gttattggct cagctggtag
     1381 ccgagccgat gcacgtggct atcgagagcg gcgccgacga gccgactcgg cccgcattcg
     1441 ttgcatggcg tccgtctcct gcgctgcata ccgctcctcg ctccagggat cgccccgaag
     1501 gtgatagcca ttcatctccc aaaatccggg ggcgttgtgg tcaaggaact ccagggcgcg
     1561 gacccacttg gcgctcttcc agaagtagag acgcggcact accagccggc tggggcctcc
     1621 gtgatcggcc ggaaggtctg ccccgtcgtg cttgagcgcc aggagggcat cctcaacgtt
     1681 cagctcagag agaagcaggt tggtggtgta gtcggggtcg gcgtgaatca cgaccgccct
     1741 ggcctcgggc agcggctcta cccgccgaag gacctccgcg atcgacacac cctcccagcg
     1801 attatcgaac cggctccagc gcgtgacgca gtggatgtcc gaggtgacct cgaaccgcgg
     1861 cagcgccagg aactcggacc agctccacgt caccggctgc cgcactaggc cgaagcagcg
     1921 gaagttccag gtggctggat cgaaccgggg cgtttcgccg taggtgagga ccggccattt
     1981 cttggtgagc acctgaccgg gcggaagtcg ctgagcaggg gtggctttgg cgtttacggt
     2041 caatagcttc tccggcctga atcgctggaa tagatcggct gtttagtttt cccgcgccgc
     2101 gagcaatccc tctttcaggc tcgggtactt tggcgcccac ccaacggcat gcttcagttt
     2161 tgcgttggac atccgaatcg agcggctgag catctcgcca acgctgcccg ccaggtgggc
     2221 gacccagggc ggtagcagtc tcggcggaga aacgccgaga tgacgagcca agacatcgcc
     2281 gatgagtcgg cgagtaaggg gctcgtcctc caccacgttg tagatgccgg agggtgccgc
     2341 cagggcggcg atcacggctg ccgcggcatc gtcgtgcgtc accatggaga aatatccttg
     2401 gggttggccc ggaatcggaa gccagccccg acgaacgctt gcggcaagcg tagctgtgaa
     2461 atcgtcgttt ggcccgtaga aataggcgaa gcgcaggacc actccccggc caccttccct
     2521 agcaaagcga agtgccgacg cctccgcatc cagtgtgcta cgattgtagc tcggtggctc
     2581 aggggagacc tcttccgtga cccagcgatc gccggactcg ggataggtga caaatgactc
     2641 ctggaggtac acctgcgcac ccgctcgaat tgcttcgtcg accagaaggg ccgacgcttc
     2701 ccggcgaatt cgatcgttct gcttccaggc tcccggcagg aatgttttca caccagttgg
     2761 gacgtgagtt gccagattta tgactacatc gtgtcctgca atcgacgccc tgaccgagga
     2821 agaaccgaag agatcgaggg ccactacggc agcaccgatt cgctcgagcg tctgcagcct
     2881 actcagcgag cgtcccgcgg ctgtgacctg gtgtccgttc cgaagcaaca ctggaactac
     2941 tcgtcggccg atgaccccgg ttgcacctgt tacgaaaatc cgcatgtccc acccagctca
     3001 cagcgcgtct gaccggccga gccgatgccg tgctcgatca gtggaaaccg ggtgccgcaa
     3061 tgacccacac cccccaaacc accattgcaa atccgatgac gcggccaaca gccttgccgg
     3121 caggggcgag cttctcgatc agcacgaaga tggcgatggc cgcaacccag agcaggttca
     3181 tcacgccagc gacaaaaagc agcgtcatca gcagcgcaca gcagccaaca caaaagcttc
     3241 catgtcggat ccccattacc aacgcgcccc aggttccttc gcgccattcc gccgacagga
     3301 atcccagggg cgatcggcaa tgtgaaagac aggagttttt gaccggcagc cattgataga
     3361 tgcccgcagc aatcagcagt cctccgccca gccaggggcg agcactcacc atcgccggtg
     3421 atagcagggc gagtctatgc aactcccact gcagcactgc ggccaccgta gcgtaaaatg
     3481 cccagaccag gagatagcca agcgtaaaga ccgccgtgga tgcggtcggc acaccccggg
     3541 cttgacgccc tcgggcaacc gtcgcgaaga gaagaatggt gggcgaagcg gaggggacca
     3601 tcattgcgac catcatcacg atccacatgg gcacgagcat ggccaacccg ggaaggtcgg
     3661 cgtctcctgc catcggcatc gccgtgccgg ggtgaggcga catggtccga ccgatctgga
     3721 cgatgtagag ccaggcaagc gccgtaatac cgagcagacc agccacgagc gggagtcggt
     3781 cgcggcgcag ggtcttctga aaccagccgg ggctggaggc agcgctactc atcaagctgg
     3841 cttatcgctg attgctccag gtcgttgtgg aatagctggc gaaaccgcca ccatggcgga
     3901 acttgaccgg accatagttc acctccagga catccgtcgt cgcaatgtct gccttgttcc
     3961 agaagaagcc gcccttgggg tacacaattt ggacttcctt gtcctggccg gacacgccgt
     4021 ctcggattgg cgtctgtcgc atctcgagga tccctggaat cttgtagccc gacttggtgc
     4081 cattcacctg catatcgatc ggcttacgga ccgggccctc caacacagcg atggttccag
     4141 ccaaggcttc ccacggcatg ccgcccgcct ggccggaaag gatcatggtg atcgcctcag
     4201 cctgtttgtc actggccttc tgatcgatga atacggcgac ctttccgttg ccttcgtgaa
     4261 ttgccttggg gtaggagcac gcgacgatat agcgaacacc tttgagatcc acatcgccgt
     4321 acttcccttc cttcacctca cctcctatga cggcgtcgca accgccgctc tttgagtt
//
LOCUS       DASRPQ010000293         1034 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_659465, whole genome shotgun sequence.
ACCESSION   DASRPQ010000293 DASRPQ010000000
VERSION     DASRPQ010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_659465"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1034
                     /locus_tag="VFD73_03400"
     CDS             <1..>1034
                     /locus_tag="VFD73_03400"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HZI73064.1"
                     /translation="PDAACTFFSRGWHEYTGQEEESALGFGWLAAVHPDDREEASSVI
                     KEATGRQAAFSLDCRLRRADGEYRWVLSSGRPRFNGRGVFEGFTGSVIDIHERKQAAR
                     SSALLSAIVDSSDDAIISKDLTGTIMSWNQGAERLFGYTAAETVGRSILMLIPPDRHE
                     EEPKILDRLRRGERVDHFETIRVRKDGRLLNISLTISPVKDSTGRIVGASKIARDITE
                     RVRQEAALKRAHADLQQFAYSASHDLQEPLRMVATYSELLRRRFGGKLGPLGDEYIGY
                     TVKGALRMETLLRDLRSYTRVSTSDELPTEEVDASEVLERALLNLHAAITESGASITS
                     GELPRVCMHG"
BASE COUNT          201 a          312 c          345 g          176 t
ORIGIN      
        1 ccggacgcgg catgcacctt cttctcccgc ggatggcacg agtacacggg tcaggaggag
       61 gagtcggcgc tgggctttgg ttggctcgcg gcagttcacc cggacgatcg cgaggaggcc
      121 agttccgtga ttaaagaggc caccggacgg caggcagcgt tttcgttgga ttgccgcctg
      181 cggcgggccg acggcgaata ccgctgggtg ctgagctcgg gccggccgcg gttcaacggg
      241 cggggagtgt tcgaagggtt caccggatcg gtgatcgaca tacacgagcg caagcaggcc
      301 gcacgctctt cggcactgct gagcgccatc gtagattcct cagatgacgc catcatcagc
      361 aaggatctga ccggcacgat catgagctgg aaccaggggg cggagcgcct gttcgggtac
      421 accgccgccg aaacggtggg ccgttccatc ctgatgctga ttccgcccga tcgccacgag
      481 gaagagccga agatcctgga ccggctcagg cgcggggagc gcgtcgacca cttcgaaacc
      541 atccgggttc gcaaggacgg caggctgctc aacatttccc tgaccatctc tccggtcaaa
      601 gactcgaccg gccggatcgt gggcgcctcc aagatagccc gggatattac cgagcgcgtc
      661 cggcaggagg ccgcgctcaa acgggcccat gcggacctgc agcagttcgc ctattccgcc
      721 tcgcacgact tacaggagcc gctgcgtatg gtcgccacgt acagcgaact cctgcgcaga
      781 cggttcggcg ggaaactcgg tcctttggga gacgaatata tcgggtacac cgtgaaaggc
      841 gcgctcagga tggagaccct gctgcgggac ctgaggtcgt acacccgggt gtccacatcg
      901 gatgaactac caaccgaaga agtggacgcg agtgaggtgt tggagagagc tcttctgaac
      961 ctgcatgcgg cgatcacgga aagcggggct tccattacgt ccggcgaact ccctcgtgtg
     1021 tgcatgcacg gcta
//
LOCUS       DASRPQ010000294         1444 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_659650, whole genome shotgun sequence.
ACCESSION   DASRPQ010000294 DASRPQ010000000
VERSION     DASRPQ010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1444
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_659650"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..595
                     /locus_tag="VFD73_03405"
     CDS             <1..595
                     /locus_tag="VFD73_03405"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HZI73065.1"
                     /translation="GEWGRAGVLAAQAGMVLRRAGIEDSRVTALLGAVQARIALHRGH
                     VSAVRRELVSAQRLRALLTYAIPHVAVQARLELIRVHLALTDLAGARTLMREVDELFR
                     RRPGLGTLVGEAAALRAQLSRQRGAGSPGASALTAAELRVLPLLVTHLSFPEIAAEMF
                     LSPSTIKSQVKTIYSKLEATSRNQAVMRARELGLLEG"
     gene            complement(1179..>1444)
                     /locus_tag="VFD73_03410"
     CDS             complement(1179..>1444)
                     /locus_tag="VFD73_03410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73066.1"
                     /translation="SEKARQIINRLNGNPSFVVEKEYLGGPSRSRTLISYFSKLDQAR
                     AEALAAIIRSEGLPLAYSELSGDGDHIPGTLQIFFGRDAEKPG"
BASE COUNT          251 a          455 c          473 g          265 t
ORIGIN      
        1 cggcgaatgg ggccgggccg gggtcctggc cgcgcaggca ggtatggtct tgcgccgggc
       61 cgggatcgag gacagccgcg tgacggcgtt gctcggtgcc gtgcaagccc ggatagccct
      121 gcaccgggga cacgtcagcg cggtgcgccg ggaactggtc agtgctcagc ggctgagagc
      181 cttgctgact tacgcgatac cccacgtggc cgtgcaggcc aggctcgagc tgatccgcgt
      241 gcacctggca ctgaccgacc tggccggggc caggacgctg atgcgtgagg tcgatgagct
      301 gttccggcgg cgaccgggcc tgggcaccct ggtgggcgag gccgcagcac tgcgggccca
      361 gctgtcccgg cagcgcggtg ccggcagtcc gggggcgtcg gcgctgacag ctgccgagct
      421 gcgcgtgctg ccgctgcttg tcacgcactt gtcgttcccg gagatcgccg ccgagatgtt
      481 cctgtcaccg tccaccatca agtcgcaggt gaaaacgatc tacagcaagc tcgaagccac
      541 ctcgcggaat caggcggtca tgcgagcccg ggagctgggg ctgctggagg ggtgaggacc
      601 ggtcttacca gagccgcacg atcggccgta gacggtacgt aacgaaactg ctgtcagtgc
      661 acccctgtca caagcatcgg tgatgcccga cagagatcac aatgacgaac tgatctctca
      721 caaattgtcc cgaaacccga aatcatcgtc caggacccga tatttccccc catcgggggg
      781 gtggaactcg ccccggcaca cgatggactg gtcctagaca ccacggggag gcgcaggcct
      841 gatggcgagt tcccaggaga cttcacgccc ggacgatctt cgccgcgggg ttcgtcaatg
      901 cttgggagtc ccgttagatg cgagagagtg attgtccagt tcgccgggcg ggtgaggtgg
      961 accggactcg cattcgcggc atggtcggcc gctgcccgag cgtgcctgtg gtcctgatct
     1021 cggcgccggc tggttacggc aagtctgtcc tggcggccca gctggtcagg gaccatcccc
     1081 tgccgtccgt ctggctatcc ctgaccgaaa cggacaatga ccccgctcat ctcgtgcgct
     1141 ctgtggtcat gaggctgaac acgccggagc cctggcatct acccgggttt ctcagcatct
     1201 ctgccgaaaa atatctgcag cgtgcctgga atatggtccc catccccgct gagctcagaa
     1261 taagccaaag gcaagccttc ggatcgaatg attgcggcaa gagcttccgc cctggcctgg
     1321 tctagcttgc taaagtacga aatcagggta cggctcctgc ttgggccgcc cagatattcc
     1381 ttctctacga caaaggacgg gttgccgttc agtctgttta taatctggcg cgccttctcc
     1441 gact
//
LOCUS       DASRPQ010000295         1209 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2852956, whole genome shotgun sequence.
ACCESSION   DASRPQ010000295 DASRPQ010000000
VERSION     DASRPQ010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2852956"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            116..874
                     /locus_tag="VFD73_03415"
     CDS             116..874
                     /locus_tag="VFD73_03415"
                     /inference="COORDINATES: protein motif:HMM:NF015438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC N-terminal beta barrel domain-containing
                     protein"
                     /protein_id="HZI73067.1"
                     /translation="MPITVSQLAIAPVKGMRLQHSTELQLAHHGATGDREFLIVNDDC
                     KLLLTSRNPRLLRIEPSWEPARNLLALRFPDGRVVQDEPGPGTAAVTRMYDGRKIPGQ
                     VISGPLGAALSGYLGRGVHLFRRAADHLGNDDRPVTLMSAASLHALAAEFSGTVPDPR
                     RFRMTVTVTGARPWAEHGWSGQQVTIGDIALRVLAPVPRCVVTTRNPESGATDARILH
                     ALARLRGKNDITFGVWCEIIRPGHIRLGDLVIPS"
BASE COUNT          193 a          411 c          387 g          218 t
ORIGIN      
        1 caggagcacc ggcccctccg aatcaggagc ggcccagcgc ggctgagcgc ccagcactgg
       61 gacagggacc tcaaccacgc caactgttac cgtcgtcggc aggaggtgtg aagggttgcc
      121 gatcaccgtt tctcagctgg caattgcgcc ggtcaagggc atgcggctgc agcacagcac
      181 cgagctccag ctcgctcatc acggggcaac aggtgaccgt gagttcctca tcgtcaatga
      241 cgattgcaag ctgctcctga cctcccggaa cccgcgcctg ctgcggatcg agccgtcttg
      301 ggaaccggcc cggaacctcc tggcgttgcg tttccctgac ggccgcgtcg tccaggacga
      361 gcccgggccc gggaccgccg cggttacccg gatgtatgac ggccggaaaa tacctggaca
      421 ggtcatctcc ggacccctgg gcgccgcgct ttccggctac ctcggccggg gcgttcacct
      481 gttcaggcgg gcggcagacc acctcggtaa cgatgatcgt cccgtgacgc tgatgtccgc
      541 ggcatcgctg cacgcgctcg ccgcggagtt cagcggcacg gttcctgacc cgcgccgatt
      601 ccgcatgacc gtcacggtca cgggcgcccg cccctgggcg gaacacggct ggagcgggca
      661 acaggtgacc atcggagaca ttgcgctgcg cgtcctcgcg cccgtgccgc gctgcgtcgt
      721 caccactcgt aaccccgagt caggcgcaac tgacgcgcgt atcttgcacg cgctggcccg
      781 gctccgtggc aagaacgaca tcaccttcgg cgtttggtgc gaaatcatcc ggcccggcca
      841 tatccggttg ggtgacctgg taataccgtc ttgagcggca agccgtggct gttgccaggc
      901 acccccgctt tcccatgatg ccggcatggc ttgccagctg ctgggcagcc gatacgggga
      961 ctacttgctg gcacttgcct gtcccgaagc tgataggccc gacgagaggg agaccgatga
     1021 caggcagagg gcgtcatatg aggagtgagc ccggatcccc cggccctgcg gtaggagcga
     1081 atgacgcacg agagctgcgt gcactgctac cgccgatcac cctgcggttg attcttcggg
     1141 cgctccttgg agtgctcctc ttcttttgcg gcatcgttct gggtgcctgg ctcatctttc
     1201 gtttccggc
//
LOCUS       DASRPQ010000296         5695 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_659715, whole genome shotgun sequence.
ACCESSION   DASRPQ010000296 DASRPQ010000000
VERSION     DASRPQ010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5695
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_659715"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..3395)
                     /locus_tag="VFD73_03420"
     CDS             complement(114..3395)
                     /locus_tag="VFD73_03420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012874565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:complement(2817..2819),aa:Sec)
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HZI73068.1"
                     /translation="MPLTRREFLRASAATLGPSTALGSLVGLGATLVPATMRAQQIRI
                     KEAKATPTVCPYCSVGCAMIAHTIGNEIVNIEGDKRSPHNEGCLCPKGAATYQLIKNP
                     NRATRVLHRKPGAVDWEEVELDWAMDRIAELVKKTRDETFVERLEDGTLVNQTTAIFS
                     LGGATLDNEWNHVQQKLMRGLGVVAIENQARIUHSSSVPGLGTRLGRGAASTYPRNLS
                     FSDCIVFEGSNMAECHPVAFRWPMKAKVENGAKLIHVDPRFTRTSAMCDLYAPIRAGS
                     DIAFLGGLINYVINDQRWKTDSFFQEYLLNYTNASAIVRPDFKGTEELDGVFSGLMEY
                     KRDKPGWDYDGFLGAYNTDSWQYATQGDEMGQPRGGEENSAPGRKEAQYKPKPGEPFE
                     HIIQKLIKPTTRHDPTLQHPHCVFQLVQRHFSRYTPEMVERVTGCPRDTFTKVAQTIL
                     ENSGRNRTTAFAYAVAWTQHTNGPQMIGCCALLQLLLGNMGRPGGGIMALRGHASIQG
                     STDVPTLYHSIHGYMSAPSGLKDHATLRDYIATEANATSYWANYPKFMVSYLKSMYGD
                     AATAQNDYGYDWHPKIIGDHSHMPMFVAMADGKVKGMLCIGQNPATSLNAALERKGMR
                     RLEWLVVRDIFLTESATFWKKSPEIEAGEVKPQDIQTEVFFMPAAQAAESDGSFTNTQ
                     RMLQWHFKAADAPGQCRSDPWFTHQLALRLKKMYANSTLPRDQGIKNLLWDFDFDAEA
                     PAGDSANSAHSAASAHPPGEPDAHKILRELNGYITGHPDQHLDGFDKLKDDGSTTCAS
                     WIYCGVYPAPDQNLAAKKEADPPGSTNAERNWGWAWPANRRVLYNRASADLDGKPWSE
                     RKKWVWWDGKEWTGYDTPDFAKTKQPRAPADYKKTGLDALGGDQPFIMIPDGRGWLYN
                     PSGLLDGPLPTHYEPAESVVRNPLYRQQSSPVFKYWKRDDNPLAGIADPKYPYVITTY
                     RLTEHYLSGVMSRWNPWLTELMPELFIELSPELASEKGIRNTDLVRISTPRSEIRAKA
                     LVTRRLRPFRLGGQVVHQVGMPWHWGWEGVVTGDVVNSLSSMVGDPNVTIHEGKAFVC
                     NVEKA"
     gene            3624..4313
                     /gene="msrA"
                     /locus_tag="VFD73_03425"
     CDS             3624..4313
                     /gene="msrA"
                     /locus_tag="VFD73_03425"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR00401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HZI73069.1"
                     /translation="MPRYPIVPFTGLALFGLLGTTVMGFGPSGSSRSELTPAPLPVPT
                     ATQQVATFAGGCFWSMQKAFDGVSGVVSVTAGYAGGSETNPNYELVETGKTRYAESVQ
                     VIYDPARISYDGLLEVYWHHIDPLTENRAFCDTGPQYRSIIFYRDAAQQRAAEASKQA
                     VNDSHRFKSPIVTVIQPATRFYPAEEYHQQFYKKNPARYQAYVIGCGRNERIKELWGD
                     QEKAKAMSRKS"
     gene            4340..4948
                     /gene="msrB"
                     /locus_tag="VFD73_03430"
     CDS             4340..4948
                     /gene="msrB"
                     /locus_tag="VFD73_03430"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HZI73070.1"
                     /translation="MRFTTTMALTFLMVSGLSTLNFGLMTLGPGTLNAQTKEQGWNPV
                     TFKKPSDAELKSRLSTEQYQVTQHEGTERPFSNAYWDNHQAGIYVDVVSGEPLFSSLD
                     KYDSGTGWPSFTKPLEPANIKTKTDHKLFAERTEVRSAHADSHLGHVFDDGPRPTGLR
                     YCMNSAALRFIPVDKLEEEGYGQYLTLFRQGEKTSSAGASHK"
     gene            5277..>5695
                     /locus_tag="VFD73_03435"
     CDS             5277..>5695
                     /locus_tag="VFD73_03435"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI73071.1"
                     /translation="MSRVFVAREKALGRTVVLKVLSPDLSAGISVERFRREIQLAAGL
                     QHPNILPLLSAGRAGNFLYYTMPFVEGESLRDRLSKGGELPVRSAVRILGGVARALAC
                     AHRQGIVHRDIKPDNILLTGDDAQVADFGIAKAISASA"
BASE COUNT         1011 a         1780 c         1788 g         1116 t
ORIGIN      
        1 cgcgccggct agcgggccgc ggccctgccc agccgccgcg ctgtcctgca gcccagccgc
       61 agcgttgtct tgcagcctag ccgccccgct gccccgcggc cccgctgccc cgcttacgct
      121 ttctccacgt tgcatacgaa cgccttcccc tcgtgaatcg tcacgttcgg gtctccgacc
      181 atggacgaca gactgttcac cacgtcgccg gtgactactc cctcccatcc ccagtgccac
      241 ggcatcccga cctggtgcac cacttgaccg ccgagccgga acggccgaag ccgccgggtg
      301 accagcgcct tggccctgat ctccgaccgc ggagtgctga tccgaaccag atcggtgttc
      361 ctgattccct tttcgctggc aagctcgggc gacagctcga tgaagagctc gggcatcagt
      421 tcggtgagcc atggattcca ccggctcatc acgcctgaga ggtaatgttc ggtgagccgg
      481 taggtggtga tcacgtacgg gtacttgggg tcggcgatcc cggccaatgg attgtcgtcc
      541 cgcttccagt acttgaacac cgggctgctc tgctgccggt agagcggatt tcggacgacc
      601 gattccgccg gctcgtagtg ggtcggcagc ggcccgtcca acagaccgga ggggttgtac
      661 agccagccgc ggccatccgg gatcatgatg aacggctgat ctccacccag cgcgtccagg
      721 ccggttttct tgtagtcggc cggcgccctg ggctgcttgg tcttggcaaa atcgggggtg
      781 tcgtagccgg tccactcctt accgtcccac cagacccact tcttccgctc actccagggt
      841 ttgccatcga gatcggcgga ggcgcgattg tagagcaccc tccggttggc cggccaggcc
      901 cagccccagt ttcgctcggc gttcgtgctt ccgggcgggt ccgcctcttt tttcgccgcc
      961 agattctgat cgggggccgg atagaccccg caatagatcc aggaggcgca ggtcgtcgac
     1021 ccgtcgtcct tcagcttgtc gaatccatcc agatgctgat cgggatggcc ggttatatag
     1081 ccgttgagct cgcgaaggat cttatgagca tccggttcgc caggaggatg agcggacgct
     1141 gcggaatggg cggaattggc ggaatcgccg gccggtgctt ccgcatcgaa gtcaaagtcc
     1201 cacagcaaat ttttgatgcc ctgatcccgg ggcagcgtgc tgttcgcata catcttcttg
     1261 agccggagcg cgagctggtg ggtgaaccac gggtccgacc ggcactgccc cggcgcatcc
     1321 gccgccttga agtgccactg cagcatccgc tgagtgttgg taaagcttcc atcgctctct
     1381 gcagcctgag cggcgggcat gaagaagacc tcggtctgga tgtcctgcgg cttcacctcg
     1441 ccggcctcga tctcgggcga cttcttccag aacgtggctg actcggtgag gaagatgtcc
     1501 cggaccacca gccactccag ccgccgcata cccttccttt ccagtgcggc attgagcgag
     1561 gtggcggggt tctggccgat gcagagcatg cccttcacct tgccgtccgc cattgccacg
     1621 aacatcggca tgtgggagtg gtcaccgatg atctttgggt gccagtcgta gccgtagtcg
     1681 ttttgggccg tagcggcgtc gccgtacatc gacttgagat acgagaccat gaacttgggg
     1741 tagttggccc agtagcttgt cgcgttggcc tcggtcgcga tgtagtcccg cagcgttgcg
     1801 tgatccttga ggccggacgg cgccgacatg tacccgtgaa tgctgtgata gagggtgggg
     1861 acgtcggtgg acccctgaat cgacgcgtgg ccgcgaagcg ccatgatccc gccgcccggg
     1921 cgacccatgt tgcccaacag cagctgcagc aaggcacagc acccgatcat ctggggacca
     1981 ttggtgtgct gggtccaggc gacggcgtag gcgaaggcgg tggtccgatt gcgacccgaa
     2041 ttctccagga tggtttgagc gactttcgtg aaggtgtccc gggggcagcc ggtgacgcgc
     2101 tccaccatct ccggcgtgta gcggctgaag tggcgctgca ccaactggaa cacgcagtgc
     2161 gggtgctgca gcgtcggatc gtgccgggta gtcggcttga tcaacttctg gatgatgtgc
     2221 tcaaaaggtt cgccgggttt cggcttgtac tgagcttcct tccggcctgg agccgagttc
     2281 tcctcgccgc cccggggctg gcccatctcg tcaccctggg tagcgtactg ccacgagtct
     2341 gtgttgtagg ccccgagaaa gccgtcgtag tcccaccccg gcttgtcccg cttgtattcc
     2401 atcaggcccg aaaagacccc gtccaactct tcagtgccct tgaagtcggg ccgcacgatc
     2461 gccgaggcat tggtgtagtt gagcaggtac tcctggaaga aggagtccgt cttccagcgc
     2521 tggtcgttga tgacgtagtt gatgagcccg ccgagaaacg cgatatcgct gcccgcgcga
     2581 atcggggcgt agagatcaca catggcgctg gtgcgggtga agcgcgggtc gacgtgaatc
     2641 agcttcgcgc cgttttccac cttcgccttc atcggccagc ggaacgccac cgggtggcac
     2701 tccgccatgt tgctgccctc gaagacgatg cagtcagaga aggagagatt gcgcgggtag
     2761 gtggacgccg cgccgcgtcc gagccgggtc cccagaccgg ggacgctaga ggagtgtcat
     2821 attcgggcct ggttttcgat cgccaccacc cccaggccgc gcatgagctt ctgctgcacg
     2881 tggttccact cgttgtccag agtggcgcca cccagcgaga aaatggcggt ggtctgattg
     2941 accagggtgc cgtcctccaa tcgctccaca aaggtttcat cgcgcgtctt cttgaccagc
     3001 tcggcaatcc ggtccatggc ccagtccagc tcgacctcct cccaatcgac agcacccggc
     3061 ttccggtgga ggacacgggt tgcccggttg ggattcttga tcagctggta agtcgcggct
     3121 cccttgggac agaggcagcc ctcgttgtgc gggctccgct tgtcgccctc gatgttgacg
     3181 atctcattgc cgatcgtatg ggcgatcatc gcgcagccga ccgagcagta gggacagacg
     3241 gtgggagtgg ctttggcttc cttgatacgg atctgctgag cccgcatcgt ggccggaacc
     3301 agggtggcgc ccagtcctac gagcgagccg agggcggtgc ttgggccaag ggttgctgcg
     3361 gaagcacgga gaaactcgcg gcgggtgaga ggcacggctc agaatcgggg gaactccagg
     3421 acgcagccgt gatgtggatc accatgcgtt ccgtgccgcc aacgccggtc tcgagaagct
     3481 ggaaccgatt gaaacatctg gtggaggaga cacattctcc cccattatgg gtgcccgcgg
     3541 caaagccgcc gatcatcggg ttggcgggat caaaagggaa cccggcggcg ttatgtatgt
     3601 acctccttcg aaagtgccct gccatgcctc gctatccgat cgtccccttt accggtctgg
     3661 cccttttcgg gcttctgggt acgaccgtta tgggtttcgg cccgagcggg tcatcccggt
     3721 ccgaactgac cccagccccg cttccggtac ccacggcaac acaacaggtt gcgacgtttg
     3781 ccgggggctg cttctggtcc atgcagaagg ctttcgacgg ggtcagcggg gtggtgagtg
     3841 ttaccgccgg ctatgccggg ggctctgaga ccaaccccaa ctacgagctg gtcgagaccg
     3901 gtaagacccg gtacgccgag tcggtccagg tgatctacga tccggcccgg atctcctacg
     3961 acgggttgct cgaggtctac tggcaccaca tcgatccgct caccgagaat cgagccttct
     4021 gcgacacggg cccccagtac cgttcgatca tcttctaccg cgacgccgct cagcagcgtg
     4081 ctgccgaggc ctcgaagcag gccgtcaacg actcgcatcg gttcaagagt ccgattgtga
     4141 ccgtgatcca gccggcgacc aggttttacc cggcagagga gtatcaccag cagttctaca
     4201 agaagaaccc cgcgagatat caggcgtatg tgatcggttg cgggcggaat gaacgaatca
     4261 aggagttatg gggggatcag gagaaggcga aagccatgag tcgaaagtcg tgagcgggaa
     4321 gagatcaggg aggatggaga tgagattcac caccactatg gcgctcacct ttctcatggt
     4381 ttcgggtctt tcgactctca actttggact catgactctc ggtcccggaa ctctgaacgc
     4441 acagaccaaa gaacaaggat ggaatccagt gacattcaag aagccgagcg acgccgagct
     4501 caagagccgg ctcagtacgg aacagtacca ggtgacccag cacgagggga ccgagcggcc
     4561 cttcagtaac gcctactggg acaatcacca ggcagggatc tacgtggatg tggtttccgg
     4621 cgagccgctg ttcagctcgt tggacaagta cgactccggt accgggtggc ccagcttcac
     4681 caagccgctc gagccggcca acatcaagac caaaaccgat cacaagctgt tcgccgagcg
     4741 gaccgaagtg agatcggccc acgccgactc acatctgggt cacgtcttcg acgacggtcc
     4801 gcgtcccacc ggtcttcgct actgcatgaa ctcggcagcg ctccggttca ttccggtcga
     4861 caagctggag gaggaagggt acggccagta cctgacactc ttcaggcagg gcgagaagac
     4921 ttcgtcggct ggagcttccc ataagtaaat gagcgccaga gccactccgc tgggaataga
     4981 ggtgcgctag cggagagtaa taagctctgg tcacgagtcg cgaatcacga gcccagcgaa
     5041 gctggtcagc gcgagcggcg ggattgcttc ggcatccgcg gcctcgcaat gactccgttg
     5101 gctggcgcga ctcgtgactc gcgactcgtg actcatccca actagtctcc catcccgacg
     5161 ctgcttacct tccaacaccg ctcccgcgcg ggtgatccct ggacgatatc cgtaactcgc
     5221 ttcaagcgtc gttaggcgac gccttcctcc tgatgcgcga gctcaggggc ggtggcatgt
     5281 cgcgtgtgtt cgttgcccgg gagaaagcgc tgggccggac cgtggtcctc aaggtgttgt
     5341 cccccgatct ctcggcgggc atcagtgtcg agcgcttccg ccgtgagatc caactcgccg
     5401 ccggtctgca gcatcccaac attctgccgc tgttgagcgc cggccgggcc ggaaatttcc
     5461 tctactacac catgccgttc gtcgaaggcg aatcgctccg cgaccgattg tcgaagggcg
     5521 gcgagcttcc ggtccggagc gcggtgcgga tcctgggtgg ggtcgcccgg gcgctggcct
     5581 gtgctcatcg gcaaggcatc gtccatcgcg atatcaagcc cgacaacatc ctgttgaccg
     5641 gtgacgacgc ccaagtcgcc gatttcggga ttgcgaaggc gatcagcgcg tccgc
//
LOCUS       DASRPQ010000297         1008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4420713, whole genome shotgun sequence.
ACCESSION   DASRPQ010000297 DASRPQ010000000
VERSION     DASRPQ010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4420713"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            678..869
                     /locus_tag="VFD73_03440"
     CDS             678..869
                     /locus_tag="VFD73_03440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73072.1"
                     /translation="MLKTGIFSDQEIAYWVRNNQLSASQELELTRAVVDFKGSPLTSV
                     IRTALRELHGNPPIPGDDI"
BASE COUNT          186 a          299 c          321 g          202 t
ORIGIN      
        1 ctggccgtgg gcgcaccgat ggaaccggcc gagctggaag aaagcgacgc catccgcttg
       61 cccggcgcgc tggaggcggc gggcggcggc tcgtccttgc tggcaggcgc gctgcgctca
      121 accctggacc tgctgcagcc gggcgtcggc cgggcaggac agcaatgatc cccacacagc
      181 ggcgtggcct tgacgctccg tttacaagat ggctgagaca tccttgtggt taagctgttg
      241 tcccgctcgt gccggctgca gccgtacttc gccgttcatg ttcgcccgtt ccgcgcggtg
      301 cactcttggc tgcacccctg aggtgagagg gcttgcaggc cgggacgttg gtccctacct
      361 cagtgagggg cggggcttga ccgggcggtc ttgcacctgg tggcggcggc aacgatccgg
      421 gcgttcatga gccgcgtcgc ggattcatcg gcccgggtcc ctcccgcgcc cgggcgccag
      481 caggcaatga ggcccggcca ccagggccgg aggaatgcgg cgcgtgtccg atacagcccg
      541 tgtgcccggt gaggcgaccg ttcgggccga gacagttgcc gagctgtgca acttgcactg
      601 gttatcagtt ggtaagtcgc taggatctaa tccgtgactg actcacttgc tcaatacctc
      661 tggatcagtt cataaatatg ctcaaaacgg gcattttttc tgaccaagag atcgcctact
      721 gggtccggaa caaccaacta agcgccagcc aggagctaga gctgacccgc gcagttgtcg
      781 atttcaaggg ttcccctcta acgagtgtca tccgaacggc gctgcgcgag ctgcatggta
      841 acccgccgat cccaggcgat gacatctaac tgtaactatc gaagaaagaa tggggaggga
      901 atctaaggac gtctgagact cgaaattaca gacgttttat tccggtcatg tcggtggtga
      961 tcattctacc tgtgatgttg atgatcaacg catgtagctc aggtccac
//
LOCUS       DASRPQ010000298         1701 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2553456, whole genome shotgun sequence.
ACCESSION   DASRPQ010000298 DASRPQ010000000
VERSION     DASRPQ010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2553456"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(373..1059)
                     /locus_tag="VFD73_03445"
     CDS             complement(373..1059)
                     /locus_tag="VFD73_03445"
                     /inference="COORDINATES: protein motif:HMM:TIGR02595.1"
                     /note="PEP-CTERM proteins occur, often in large numbers,
                     in the proteomes of bacteria that also encode an
                     exosortase, a predicted intramembrane cysteine proteinase.
                     The presence of a PEP-CTERM domain at a protein's
                     C-terminus predicts cleavage within the sorting domain,
                     followed by covalent anchoring to some some component of
                     the (usually Gram-negative) cell surface. Many PEP-CTERM
                     proteins exhibit an unusual sequence composition that
                     includes large numbers of potential glycosylation sites.
                     Expression of one such protein has been shown restore the
                     ability of a bacterium to form floc, a type of biofilm;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-CTERM sorting domain-containing protein"
                     /protein_id="HZI73073.1"
                     /translation="MGRHHGAMEEAMLRWKLSICAVGLALGAWANQSAQATFIQTSDP
                     RFGLHSGVLDTSTGLEWLNLTFSQGLSANQVLVQLGAGGTFSGFRYATSSEFSGLVNE
                     VFGRLDICCFIDLPLNTTVNFIDLFGLTVPGSAQQYGMLPISTDLVLLTHFFVEPNVP
                     GTALVGAYDQDTNSFDFRHPQRGSYLVRAETTNVPDPESPVPEPASLVLLGAGLTALM
                     ATKRCSRGGQ"
BASE COUNT          354 a          521 c          515 g          311 t
ORIGIN      
        1 gcagctagcc tgctgtccgg aggctgccca tgcagaagtc ccatgatcac cgtcgcgatc
       61 tgatcgatac gtatgctgcg gcggagcatc tggtggacgt cgaatcgcac attgcgcaat
      121 cgcactgcgc ggcggtcaat cgcgatctcc tcgcagctct gaagtggctg gtgtgggccg
      181 tagatttcca gcgggtttca ggagaaggga cagacccgca ggacctaaag gccgccctgg
      241 tcgccgctcg acagcaatcg ccaaggcggg gggatgagag gacaagtggg cctgagggct
      301 ggaaccgtag tgcgctccga tacccccgac cgagctcgcc ccgaagctta tccagggcga
      361 taatgcaccg gatcattggc caccacggct gcagcgcttg gtcgccataa gtgcagtcag
      421 accagcgccg agtagcacca aggacgccgg ctcaggcacc ggagattctg ggtcgggcac
      481 atttgtcgtt tcggcccgca ccaggtagct tcccctctgc gggtgacgga agtcgaatga
      541 attggtgtcc tgatcatagg ccccgacgag cgctgtacca gggacgttcg gctccacaaa
      601 gaagtgggtg agcagcacta aatcggtgct tatcggaagc attccgtact gctgtgcgct
      661 gccaggaact gtcaatccaa aaaggtcgat gaagttcaca gtcgtattca gtggaaggtc
      721 gatgaagcag cagatatcca gtcgtccaaa cacctcgttc actagcccac tgaactccga
      781 gctggtcgca tagcgaaacc cagagaatgt gccaccggcg ccgagctgaa ccaaaacctg
      841 gtttgctgaa aggccctggg agaatgtgag attgagccac tccaggccgg tactcgtatc
      901 aagcacgcca gagtgcagcc cgaaccgtgg gtcgctggtc tggatgaagg tggcttgtgc
      961 ggattgattt gcccatgcgc ccagcgccag gccaacagca caaatactca gtttccacct
     1021 aagcattgcc tcctccattg cgccatggtg gcggcccatc gtgcggtgat tggtgccctt
     1081 gatgcgcggt tcgtccccta ctccccactc ccaaaatggc gatctcgccg acagaagcgc
     1141 gcatgggacg gagcaataga gctacagcgt aatcagggtc agcagtgttt tacctcgtgc
     1201 ccagcatcgg ttcccacgcg ataatatgca gcggcagcaa ttaggttccg cccagccgca
     1261 ggagatgcga cagacccgga ggacttaaag gccgccctgg tcgccgctcg gcagcgatcg
     1321 cgaaggcggg gatgagagga ctaccacgct gcctcaccat cgcgactaaa cgaggtgtgc
     1381 acctcgaccg aatgcggctg ggaggataat gctgagcggg atgtcccgtt gcgaggatcg
     1441 atcgatgcgc gctgtgatac tgctcgttct cctactagtc gcgggctgca tcagcgtctc
     1501 tagaaccacc ccgcctcccg ccagcagcac ggtggtcgcg ccacctggcg ccactgtggt
     1561 ctgctcggac ggcacccggc cgccttgccg ctgagccgcc cggatcgcca cccagcttcg
     1621 gctcagccct gagtcattgc aagcgtcacg gaccgaagcg gaacgcctcc atcttggcga
     1681 gcgaattcga gcgtcatgcc a
//
LOCUS       DASRPQ010000299         1112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3480370, whole genome shotgun sequence.
ACCESSION   DASRPQ010000299 DASRPQ010000000
VERSION     DASRPQ010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3480370"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..646)
                     /locus_tag="VFD73_03450"
     CDS             complement(<1..646)
                     /locus_tag="VFD73_03450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73074.1"
                     /translation="MLRRVGRLLLALTCLITIPGVLFGQADSTRPDTAGPRVRLSFGA
                     EPFRLTEPATFRAPWSAGEHSPPALRVMSWDSTVTSALDSARQERRMALRMLTLYGQA
                     EAEPTEPGAPPPDQGVLGLSKKYADLALDGQVRLELRTDRLRNERCGTAELLDPNSGC
                     RGGFKPPRLDNQVAVRSSGIVGQRAHLAVDYDTERDFTANNNVQVYYQGLEDEIV"
     gene            725..>1112
                     /locus_tag="VFD73_03455"
     CDS             725..>1112
                     /locus_tag="VFD73_03455"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HZI73075.1"
                     /translation="MRLISRYLLRQLTAPFIFALVAQTSLMLLSQIAKKFGALVGKGL
                     SWTVISEVFVLSLPFIVAMTLPMAVLLAVLYTFSHLAADNEITAMRASGLSIYQVLTP
                     VLLWGVFMSAVNYAFVDQVLPRTNARL"
BASE COUNT          188 a          353 c          364 g          207 t
ORIGIN      
        1 ggacaatctc gtcctcgagg ccctgatagt agacctggac gttgttgttc gcggtgaagt
       61 cccgctcggt gtcgtagtcc acggcgaggt gcgctcgctg ccccacaatg ccgctggagc
      121 ggacggcgac ctggttgtcc agccggggag gcttgaatcc gccgcgacag ccggagttgg
      181 ggtccagcag ctccgccgta ccgcagcgct cattcctgag tcgatcggtc cgaagctcca
      241 atctgacttg gccgtcgagc gcgaggtcgg catacttctt ggagagtccg aggaccccct
      301 ggtccggggg cggagcgccc ggctcggtcg gctctgcctc ggcctgtccg tagagggtca
      361 gcatccggag cgccatccgc cgttcctgtc tggcagaatc cagcgcgctg gtgacggtgc
      421 tgtcccagga catcacccgg agcgcgggag gcgagtgctc gcccgcactc cagggagccc
      481 ggaacgtcgc cggctcggtc agccgaaacg gctcggcgcc aaagctgagg cggactctgg
      541 gccccgccgt gtcgggccga gtcgaatcgg cctgaccaaa caggaccccg ggaatcgtga
      601 tgaggcaggt gagggcgagg agtagacgcc ctactcttcg gagcacaacg atagggcttg
      661 ggagtagaga agcgagcaat ataatgaagt tacgaacccg ttacaacaag acaagttagc
      721 ctctgtgcgc ctgatcagcc gatacctgct gcgccagctc acggcgccct tcatctttgc
      781 gctggtcgct cagaccagcc tgatgttgct cagccagatc gccaagaaat tcggcgccct
      841 ggtgggcaag gggctgtcct ggacggtgat cagcgaggtg ttcgtgctga gtctgccgtt
      901 catcgtggcc atgactcttc cgatggccgt gttgctcgcg gtgctctaca ccttcagcca
      961 tctcgccgcc gacaacgaga tcaccgccat gcgggcgagc gggctcagca tctatcaggt
     1021 gctcaccccg gtgctgctct ggggtgtctt catgtcggca gtcaactacg cctttgtgga
     1081 ccaggtgctg ccgcggacca acgcccggct cc
//
LOCUS       DASRPQ010000300         1014 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2553574, whole genome shotgun sequence.
ACCESSION   DASRPQ010000300 DASRPQ010000000
VERSION     DASRPQ010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2553574"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..988)
                     /locus_tag="VFD73_03460"
     CDS             complement(<1..988)
                     /locus_tag="VFD73_03460"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HZI73076.1"
                     /translation="MKRQVVPYANLITKVLQEASAGDLPNIVMLDNPNVPQVAATGQL
                     KPLNGLPGFTTSGYVPGAISECTYQGKQYCYPIGTNTIGIFYNKAMLAAAHVSPPKTW
                     AQLQAAAKTLTKGNVKGFAFDATADEQSTWQLEPFFWSSGGNLAKVNSPAFTQSLQLW
                     VNMVKDGSASKSVLQWGQDPDLTQQFLHKTAAMIEDGPWIFPELNAAGWKYNKTYGIV
                     PIPTQKVGQTVVTPLGGETWNIGNSGSAEQQNMAWQWIKGAQVPSVMTHITKLMYYLP
                     TKPAVTADYLKGGPQYTVFAHETQTSRSRTTQYGANYPKVSQAIWTAIQAAIT"
BASE COUNT          151 a          294 c          355 g          214 t
ORIGIN      
        1 cggtgatggc ggcctggatc gccgtccaga tggcctgcga caccttcggg tagttggcgc
       61 catactgggt cgtccgggac cgggacgtct gggtctcatg ggcgaacacg gtgtactgcg
      121 ggccgccctt gaggtagtca gccgtcaccg ccggcttggt cggtaggtag tacatgagct
      181 tggtgatgtg cgtcatcacc gacggcacct gagcgccctt gatccactgc caggccatgt
      241 tctgctgctc cgcgctgccg gagttgccga tgttccaggt ttccccgcct agcggggtga
      301 ccacggtctg gccgaccttc tgcgtgggga tcggcacgat cccgtaggtc ttgttgtact
      361 tccagccagc cgcgttcagc tcagggaaga tccacgggcc gtcttcgatc atggctgcgg
      421 tcttgtgcag gaactgctgg gtgagatccg ggtcctggcc ccactggagg accgacttgg
      481 aagccgaccc gtccttgacc atgttgaccc agagctggag ggactgggtg aaggcagggg
      541 aattcacctt ggcgaggttg ccgccagaac tccagaagaa cggctcgagc tgccaggtgg
      601 actgctcatc ggcggtcgcg tcgaacgcga agcccttgac gttccccttg gtgagggtct
      661 tggcggcggc ctgaagctgc gcccatgtct tcggcgggga cacgtgcgcg gcggcgagca
      721 tcgccttgtt gtagaagatg ccgatcgtgt tggtgccaat gggatagcag tactgcttcc
      781 cctggtaggt gcactcactg atggcgccgg gcacgtagcc gctggtggtg aagccgggga
      841 ggccgttgag tggcttgagc tgcccggtgg cggcgacctg cggcacgttc gggttgtcca
      901 gcatcacgat gttcggcagg tcaccggcgc tggcctcttg cagcaccttg gtgatcaggt
      961 tggcgtaggg caccacctgg cgcttcaccg tgacattggg atgagccttt tcga
//
LOCUS       DASRPQ010000301         1211 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4107158, whole genome shotgun sequence.
ACCESSION   DASRPQ010000301 DASRPQ010000000
VERSION     DASRPQ010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1211
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4107158"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(188..1096)
                     /locus_tag="VFD73_03465"
     CDS             complement(188..1096)
                     /locus_tag="VFD73_03465"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI73077.1"
                     /translation="MIADLDTLLIALYVELTDSIIPCLGFTRSGPGQRPEVTDAELVC
                     LAVAQMLLRYDGERHWLRAAPARVGHLFPRLLAQSEYNQRLKNAAPLMEAALRWLAGA
                     TPATAELLRLMDATPISCGQSVITARRSDLFGWAGYGYCPSHSRWYWGTKLLLICTCE
                     GTVTGFSLANPKLAGEREQARTTLECQPANRPQPGTAIVTDKGLAGEGTEEFFASPGL
                     DLDLIRPARTDEKTPRYFPNWLRQRIEAIIWTLKNQLGLERHGGRVPAGLWARITQRL
                     LALNAVIWFNWQIGAPIKRSLIAYDH"
BASE COUNT          207 a          401 c          400 g          203 t
ORIGIN      
        1 atcgcatacg catcggtcag agaccccaca tcaggccaag cgtcacagaa ctgagagccc
       61 tcagctcggc aaggctcgcc aaagccacca ctcagatgga gtgggcctgc ggcgcctccg
      121 ccggctccac gcgcttggcc agtgccatcc gatactctta gatcgttgac aggggattgt
      181 gggctggtca gtgatcgtag gcgatgaggg atcgcttgat gggtgcgccg atttgccagt
      241 tgaaccagat gactgcgttg agcgcgagca ggcgctgggt gatgcgggcc cacagcccgg
      301 cggggacccg gccgccgtga cgttcgaggc cgagctggtt cttcagcgtc cagatgatcg
      361 cctcgatgcg ctgccgcagc cagttcggga agtacctggg tgtcttctcg tccgtgcggg
      421 ccgggcggat caggtccagg tccaggccgg gactggcgaa gaactcctcg gtgccctcgc
      481 cggccaggcc cttgtcggtg acgatggcag tgccgggctg cggccggtta gccggctggc
      541 attccagcgt cgtgcgggcc tgctcgcgtt ccccggccag tttcgggttg gccaggctga
      601 acccggtcac ggtcccttcg caggtacaga tcagcagcag cttggtcccc caataccagc
      661 gcgaatgcga cgggcagtac ccgtaaccgg cccatccgaa caggtcagag cggcgggcgg
      721 tgatgaccga ttggccgcac gagatgggag tggcatccat cagccgcagc agttccgcgg
      781 tcgctggcgt ggccccggcc agccaccgca gcgccgcttc catcagcggc gccgcgttct
      841 tcagccgctg gttgtactca ctttgggcca gcagccgggg gaacaggtgc cccacccgtg
      901 ccggggcggc gcgcagccag tgccgctcgc cgtcataacg caacagcatc tgcgctaccg
      961 ccaggcagac cagctcagcg tcggtcacct ccggccgctg ccccggcccg gaccgggtaa
     1021 agcccaaaca ggggatgatc gagtcggtca gctccacata gagtgcgatc agaagagtgt
     1081 ccaggtcggc gatcacgatg acttcccaag gtcagacgtg tgtagacacg ccgatcttgg
     1141 acactcttcg cctgcccggc aacctgcagc taatccccgg tcaacgatct agtccccggc
     1201 cgtggaatcg g
//
LOCUS       DASRPQ010000302         1157 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2553700, whole genome shotgun sequence.
ACCESSION   DASRPQ010000302 DASRPQ010000000
VERSION     DASRPQ010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1157
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2553700"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            110..403
                     /locus_tag="VFD73_03470"
     CDS             110..403
                     /locus_tag="VFD73_03470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73078.1"
                     /translation="MRNHDRNQDRNHDRQDPNTGVQHMLSAFSEQRRLSLLKDLSYLR
                     MRARSSRGTPLLDWEIEDLCDALESTEDFFMQIWPVMIRLLEAMADQPYLDHQ"
     gene            complement(607..>1157)
                     /locus_tag="VFD73_03475"
     CDS             complement(607..>1157)
                     /locus_tag="VFD73_03475"
                     /inference="COORDINATES: protein motif:HMM:NF024872.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZI73079.1"
                     /translation="QWVWQALGRPEVSALDRTLRLEHHSLVSGWKQAMWDAIRDHRPG
                     LVVIDTCTPAFQLKDENDNAEAVQVLNILRDIRARIDPLMSFLLLKHERHRDDAMRER
                     TIRGAKSWLGACDQVIYHVIPRGGRRRKDGLRRTHLEPNKSRAFGMKSTLIIDPEWTE
                     GSPKGLILHAKPFLGESEKLAG"
BASE COUNT          221 a          336 c          371 g          229 t
ORIGIN      
        1 aacccctgca tgcggaccgg aaatgctcat gttggccctg tccgtgcaga tgctgaagac
       61 gtgtgcaggc caagccttac tactacgata gcggaaggag actgatcccg tgcggaacca
      121 tgatcggaac caggaccgga accatgaccg gcaagaccca aacactggtg tccagcacat
      181 gctctccgcc ttcagcgagc agcgccgcct cagcctgctc aaggacctga gctacctgcg
      241 gatgcgggcc cggagcagcc gggggacccc gttgctggac tgggagatcg aggacctctg
      301 tgacgccctg gagagcacgg aggacttctt catgcagatc tggcccgtga tgatccggct
      361 gctggaggcg atggccgacc agccgtacct ggaccaccaa tgaaaagcac gggagatata
      421 gcgcagtgtg tcaggtgtgc tacgaggcac tgtgtccact ggcggtgctt atgggtctgg
      481 gggtactgct gcgcctgtgg ggccaagaga aacagtggcc cccaggcatg aataagaaag
      541 aagagagaga agagatatgc tgtttgtttc tttaccactt gtagtatgtg ggtatttgtt
      601 taggaattat ccggcgagtt tttcactctc gccgaggaag ggtttggcat gcaatatcaa
      661 gcccttcggg gacccctccg tccactcggg gtcgatgatc agcgtggact tcattccgaa
      721 ggctctcgat ttgtttggtt caaggtgcgt gcgccggagg ccgtcctttc ggcggcggcc
      781 tccccggggg atgacatggt aaatgacctg gtcgcaggcc cccagccagg acttggcccc
      841 ccggatcgtc cgctctcgca tcgcgtcatc ccgatggcgc tcgtgcttga ggagcaggaa
      901 ggacatcagg gggtcgatcc gggctcggat gtcccggagg atattcagga cctggacggc
      961 ctcggcgttg tcgttctcgt ccttgagctg gaaggccggg gtacaggtgt cgatgaccac
     1021 cagccccggt cgatggtccc ggatcgcgtc ccacatcgct tgcttccagc ccgaaactag
     1081 ggagtggtgt tccagccgga gcgtccggtc cagggcactg acctccggcc gccccagcgc
     1141 ctgccagacc cactggt
//
LOCUS       DASRPQ010000303         2016 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1920943, whole genome shotgun sequence.
ACCESSION   DASRPQ010000303 DASRPQ010000000
VERSION     DASRPQ010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2016
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1920943"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1526)
                     /locus_tag="VFD73_03480"
     CDS             complement(<1..1526)
                     /locus_tag="VFD73_03480"
                     /inference="COORDINATES: protein motif:HMM:NF013123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DPP IV N-terminal domain-containing protein"
                     /protein_id="HZI73080.1"
                     /translation="MPITLFAPESPVIRFTLLTSLTLLLVGRPAKAQRPDSSLLTVQR
                     IYGSSEFKSQSFGPARWLGTDGSAYTTLEEADEQGGQNLVRYDTERGGRQVVVAARQL
                     IPPGDSVPLRVEEYAWSPDNRMLLIFTNTQPVWRLNTRGDYWVLELATGRLHQLGGKD
                     AKPSTLMFAKFSPDGRRVAYVRENNLYVEDLGTGAITPLTNDGSRTLINGTFDWVYEE
                     ELMNYYADGWRWSPDGRSIAYWQLNADSVRDFDLINDTDSLYSRVVPVQYPKAGEANS
                     AARVGVVSAYGGPTRWLDVPGDPRNHYIARMEWAPASDEVVLQRLNRLQNTNEVMLGD
                     PGTGKVHTVLTERDSTWVDLTDDFAWLNGGKNFLWVSERDGWNHVYIVSRDGKSVRLV
                     TRGNFDVSEVLGADEQQGWLYYVASPDNPTQQYLFRTRLDGKGGAERLSPKSESGTHE
                     YDRAPGFRYALVTYSSFGNPPIIRLVRLPSHQVIRTLVDNAGLRRRVSSLKRGTVEFF
                     "
     gene            complement(1819..>2016)
                     /locus_tag="VFD73_03485"
     CDS             complement(1819..>2016)
                     /locus_tag="VFD73_03485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73081.1"
                     /translation="VAGLELESPALVDTAPEAGTVFGFVLTRPGSILGRTLGLTGAAV
                     AAVLVFGRSVSAGLGEVEAVS"
BASE COUNT          379 a          640 c          621 g          376 t
ORIGIN      
        1 ctgaagaact cgacggtacc tcgcttgaga ctgctcacgc gccgacgcag gccggcgttg
       61 tcgaccagcg ttctgatcac ttgatgactg gggagccgta ccagccggat gatcggcgga
      121 ttaccgaagc tggaataggt caccaacgca tagcggaatc ctggtgctcg gtcgtattcg
      181 tgggtccccg actcactctt cggtgacaac cgctccgctc cgcctttccc atcgagccga
      241 gtgcggaaga gatactgctg ggtaggattg tccggcgagg ctacgtagta gagccatccc
      301 tgttgttcgt ccgcccccag cacttcggaa acatcgaagt tcccccgagt caccagccga
      361 acggatttcc cgtcgcgcga gacaatgtag acgtggttcc acccgtcacg ttcgctgacc
      421 cacaggaaat ttttgccgcc gttcagccag gcgaagtcgt cggtcagatc gacccaggtg
      481 ctgtcgcgct cggtgagcac cgtgtgcact ttgcccgttc ccgggtcgcc cagcatgacc
      541 tcgttggtgt tctggagacg attgagccgc tgcagcacga cctcatcgga cgcaggcgcc
      601 cactccatcc gagcgatgta gtggttgcgg ggatcaccgg gaacatccaa ccagcgggtg
      661 ggaccaccat acgcgctgac cacaccaacc cgcgccgcgg agttggcctc gcccgctttg
      721 gggtactgca ccggtaccac ccgggaatag agcgagtcgg tgtcgttgat caggtcgaag
      781 tcgcgaaccg aatccgcgtt cagctgccag tacgcgatgc ttctcccgtc cgggctccat
      841 cgccagccat cggcgtagta attcatcagc tcttcttcgt atacccagtc gaaggtgccg
      901 ttgatcagcg ttctggagcc gtcgttggtg agtggggtaa tcgccccggt gccgaggtct
      961 tccacgtaga ggttgttttc ccggacgtag gccacgcgac ggccatcggg ggaaaacttg
     1021 gcaaacataa gggtggaggg tttggcgtct ttgccgccaa gctggtggag gcgcccggtg
     1081 gcaagctcga gcacccagta atcaccgcgg gtattgagac gccacaccgg ctgggtgttg
     1141 gtgaagatca ggagcatccg gttatcggga gaccaggcgt attcctcgac ccggagtgga
     1201 acgctgtcac ccggaggaat cagctgccgg gcagccacca cgacttggcg accaccgcgc
     1261 tcggtatcgt accgaaccag gttctgccct ccttgctcat ccgcctcctc caacgtggtg
     1321 tacgccgagc cgtcagtccc gagccagcgc gccggcccga agctctggct cttgaactcg
     1381 gaggatccgt agattcgttg aacggtgagc aggctggaat cgggccgttg ggccttcgcc
     1441 ggccggccca cgagcaggag agtgagtgag gtcaaaagag taaagcggat cactggagat
     1501 tccggagcga agagtgtgat gggcatcgct gcgggcagca tgcggtcagg actatccctt
     1561 cagccagatg ccaggcagga ttatacatct tccaaacggg agtcacatgt tcgattcaga
     1621 ctttggccgg catccggccc tgctcctcgc cggagcgctc ctgctcgccg gttcggcctg
     1681 cgccaaaggc gccgatcagc agaaagccgc ggactccggg acctcgtcgg cagcagtggg
     1741 aacctcggac accgcctcac ccaccggcgg gaccacggcc tccgatagcg gagctcgcgt
     1801 tacgacgtct gctgccagtc aagacaccgc ctcgacttcg ccaagtccag ctgacacgga
     1861 gcggccgaag accagcaccg ccgctactgc tgctccggtc aagccgaggg tgcgccccaa
     1921 tatcgatccc ggtcgagtga gcacgaaacc gaagaccgtt ccggcttcgg gtgcggtgtc
     1981 taccagcgct ggtgattcca gctccaatcc cgcgac
//
LOCUS       DASRPQ010000304         1005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_349364, whole genome shotgun sequence.
ACCESSION   DASRPQ010000304 DASRPQ010000000
VERSION     DASRPQ010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349364"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VFD73_03490"
     CDS             <1..244
                     /locus_tag="VFD73_03490"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YhjD/YihY/BrkB family envelope integrity
                     protein"
                     /protein_id="HZI73082.1"
                     /translation="FVLASLGFSFYVAKFGSYGKTYGALAGVVILIFWLYLAGTAILL
                     GAEVNAESERQAAAQAGHPSAKASAAQMERGERSPR"
     gene            complement(248..577)
                     /locus_tag="VFD73_03495"
     CDS             complement(248..577)
                     /locus_tag="VFD73_03495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73083.1"
                     /translation="MTSQPTPPLLTGHVLEISFATFTPQITVHSERQLTVEIIAGDGI
                     GFSDTVEYEAVAVRDDLVVLSWQEHIGSTVVHVLDLSSSRAYTAVTPAKGGFMRLTGR
                     LEVKSET"
BASE COUNT          173 a          311 c          338 g          183 t
ORIGIN      
        1 cttcgtgctg gcctcgctcg ggttctcgtt ctacgtggcc aagttcggct cgtacggcaa
       61 gacgtacggc gcgctcgccg gggtggtcat cctgatcttc tggctctacc tggccggcac
      121 cgcgatcctg ctcggcgccg aagtcaacgc ggagtctgag cgccaggcgg ccgcgcaggc
      181 cggtcacccg agcgcgaaag ccagcgcggc gcagatggag cgcggcgagc gcagtccccg
      241 ctaagcctca agtttcagat ttgacctcaa gccggcccgt caatcgcatg aaaccgcctt
      301 tggcgggtgt gactgcggtg tacgcgcgag aggagctgag atcaagcacg tgtacgaccg
      361 tgctaccgat gtgctcctgc caggaaagga cgaccaagtc atcgcgaaca gcgactgcct
      421 catactcgac ggtatcggag aaaccgatac cgtcacccgc gattatttcc acggtcagct
      481 ggcgttcgga gtgaacagtg atctgcggtg tgaaagtcgc gaaactgatc tcgagtacgt
      541 ggccggtgag aagcgggggt gtgggttgtg aggtcatctc gaactcctgc gggtccggtc
      601 cgcctatcta tcagggtatt gggcggggta cagcctggct gggcgggatt gcatcgcggt
      661 atcaccgcgc gctgagtatc accgccccgg cgccgaggag ttctgttgcg cgaatgaaca
      721 ggaacgagct gccccagata accgaagcgg caatgaacag cagcagcgcc ttccgggtca
      781 cgtctccgtc ccgcccgtcg gggtataccg cgccgcggct ggcttcgggt tactcacgaa
      841 ttcccagcta cccgagagcg gcaggttatt accagccagg ccaacggcgg gccatgaccc
      901 tgaccgttgc cgggacgccg gcaggcctcc cgggcggtgc tggtggtgct ggcggtgcgc
      961 aggtcctttc acgaggcgcg tgctgtgctc gccttccggc ggcag
//
LOCUS       DASRPQ010000305         1154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1600788, whole genome shotgun sequence.
ACCESSION   DASRPQ010000305 DASRPQ010000000
VERSION     DASRPQ010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1600788"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(66..503)
                     /locus_tag="VFD73_03500"
     CDS             complement(66..503)
                     /locus_tag="VFD73_03500"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HZI73084.1"
                     /translation="MTAFTIQDVSRRSGLSEPTLRYYEEVGLIGPVDRDGSSGHRRYS
                     SEDVDTLQMLACLRAMGMGIEDMRTYQANRARGRAAAAEQRDLLLRHAERVEAQIETL
                     RTHLDYLRDKAAVWDARDRGDELAEAAAWERVRVVVERMEVAR"
BASE COUNT          222 a          385 c          360 g          187 t
ORIGIN      
        1 ccgcagcagc gccgcgatca actgcgtgcc cacgtaacca gaaccgccgg tgacgagaac
       61 cgggctcatc gtgccacctc catccgctcg acgacgactc gtacccgctc ccaggccgct
      121 gcctcggcga gctcgtcgcc gcggtcgcgg gcatcccaca cggccgcctt gtcgcgcagg
      181 tagtcgaggt gggtgcgcaa cgtctcgatc tgcgcttcga cccgttcggc atggcgcagc
      241 agcaggtcgc gctgttcggc cgctgccgca cgtccgcgcg cccggttggc ctggtacgtg
      301 cgcatatcct cgatgcccat gcccatggcg cgcaggcagg caagcatctg gagcgtgtcg
      361 acatcctcgc tgctgtagcg gcggtggccg ctgctgccgt cccggtcgac cgggccgatc
      421 agcccgacct cctcgtaata gcgcaacgtg ggctcgctga gcccgctgcg ccgggagaca
      481 tcctgaatgg tgaaggccgt catgactgca gcaaagcaaa cctcaagcgc ttgaagtcaa
      541 ggccgggttt cgcgggttct gtgccggccg ccactgtgat ggcccagatc cacaccagca
      601 ggagcatcca ggccgtatag atcgcgaacg gaattcccga tccgaagaac aaatcgagga
      661 tggacttacc gacggtcgga gttgaccagg cgtgagctga ccctggcgca tggcgagtgc
      721 ctccgcaccg gctggagtta gctgatatcg ccgctttccg ctgtcacctt cggctccgat
      781 cagcccggac cggctgaggg ccgatagggc gggatagaca ctgcccggcg atggagcgta
      841 tcccggggag aaaagcctcc cgagctccac cagcatctcg tagccattca tggacctctg
      901 ctggagcagt gccaacagca ccaacggcag ttcaccgtac cgaaagaacc ccacgccgct
      961 cacctgtccc gcggaacgat ttacgattct attacgaaag ccctccgagg tgaaggagcg
     1021 gagaggcgga gagggaggcc ggcgctcgcc gccgcgtcgc gacggaatcc gactgtgagc
     1081 agcactttca accacaaggt tgacagatgg acgaccggaa gcctagagta ctttcaacca
     1141 tcgagttgaa acgg
//
LOCUS       DASRPQ010000306         2148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2554156, whole genome shotgun sequence.
ACCESSION   DASRPQ010000306 DASRPQ010000000
VERSION     DASRPQ010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2554156"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VFD73_03505"
     CDS             <1..180
                     /locus_tag="VFD73_03505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73085.1"
                     /translation="GAAGQRGSGAAGQRGSGAAGQRGSAEDLQKEESSRAAEGGVAIR
                     PWTRLDCHGGFAASQ"
     gene            complement(254..1057)
                     /locus_tag="VFD73_03510"
     CDS             complement(254..1057)
                     /locus_tag="VFD73_03510"
                     /inference="COORDINATES: protein motif:HMM:NF013397.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015499 - formate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015724 - formate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HZI73086.1"
                     /translation="MAEKAEAGTRLSAVEIHDNILEPAKKEMDRPAASLLWSALASGM
                     VIGFSFLASAFAAHLVSEPYRTAAAAAAYPLGFIFVVMARSELFTENTLDPVVPLLEQ
                     RNWETFRKMLRMWGLLLAGNLVGALIFGWVLARTPVVQPELHPSMLKIATEVSSGGFG
                     QVLYAGVFAGWLIALLSWLLASTHSTPAQIVLIWLCTAPISALHFRHSIAGSVEAFYR
                     AASGGASWGSMLGQFVVPAVIGNAIGGVLLVALLNYGQVAQEKAQGEGK"
     gene            complement(1057..1365)
                     /locus_tag="VFD73_03515"
     CDS             complement(1057..1365)
                     /locus_tag="VFD73_03515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73087.1"
                     /translation="MAGREVRLEHLLGRVVRTAAGRAVGRIDDLRAEPDGEDYVVTDV
                     VLGELGFRAWLFSLTAQLPTFQSLGLRQRSRVRAIPWRWIDLSDPEHPRFRGPEQEEG
                     "
     gene            complement(1368..1718)
                     /locus_tag="VFD73_03520"
     CDS             complement(1368..1718)
                     /locus_tag="VFD73_03520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73088.1"
                     /translation="MDLGRQVLDQQLVDRSNLNIGKVDGIVLELTDEGPPRVAAILTG
                     GHILAWRLHPWIERVAARLTRRCGPMASEPFRIPWSKVKKIGVDVKVDVAADEVMPWE
                     HWVRDHILRHIPGA"
     gene            complement(1720..>2148)
                     /locus_tag="VFD73_03525"
     CDS             complement(1720..>2148)
                     /locus_tag="VFD73_03525"
                     /inference="COORDINATES: protein motif:HMM:NF013715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HZI73089.1"
                     /translation="NTLGRPGFYLFAATLFISCLGAALEISLATAYSFAQGLGWNWGE
                     SVHAHDAARFSLTYTIMLAAASVLMVAGLDPLKLTLFSMALTSLTLPIVTFPFLVLMN
                     DGDYVGEHGNGWISNAAVIAISLLASIIALVAIPLQLMGG"
BASE COUNT          413 a          714 c          685 g          336 t
ORIGIN      
        1 ggggcagcgg ggcagcgggg cagcggggca gcggggcagc ggggcagcgg ggcagcgggg
       61 cagcggggca gcgcagaaga tctgcaaaaa gaggagtcat cgcgagccgc cgaaggcggc
      121 gtggcgatcc ggccgtggac gcgtctggat tgccatggcg gcttcgccgc ctcgcaatga
      181 ctccgctttc gttgacgttc ccgtgtcctc cgtgccgtct ctgccccgcc gccccgctgc
      241 cccgccgccc cgcttacttc ccctccccct gcgccttctc ctgggcaacc tgcccatagt
      301 tgagcagtgc gaccagcagc acccctccga tagcgttgcc gataacggcg ggcaccacga
      361 actgaccaag cattgatccc catgacgctc cacccgaggc tgcccggtag aacgcttcga
      421 ccgagccggc aatcgagtgg cggaagtgga gagcggagat tggggcggta cacagccaga
      481 tcaggacgat ctgcgctggc gttgaatggg tagaagcgag gagccagctg agcagcgcga
      541 tgagccagcc ggcgaagact ccggcgtaga gcacctggcc gaatccgccg gagctcactt
      601 cggtcgcgat cttcaacatg ctgggatgga gctccggctg caccaccggc gttcgtgcga
      661 gcacccaccc gaagatcagc gctcccacca gattgccggc cagaagcaaa ccccacatcc
      721 gaagcatctt tcggaaggtc tcccagttcc gctgctccag gagcggcacc accggatcga
      781 gcgtgttctc ggtgaacaat tcgctccggg ccatgaccac gaagatgaag ccgagcgggt
      841 aggccgcggc cgccgccgca gtgcgatacg gctccgaaac caggtgagcg gcaaaggcgc
      901 tggccaggaa gctgaaccca atgaccatgc cggatgcgag cgccgaccag agcagcgatg
      961 ccgccggccg gtccatctcc ttcttggccg gctccaggat gttgtcatgg atctcgaccg
     1021 cactcagccg agtacctgcc tcggctttct ctgccatcac ccctcctctt gctccggacc
     1081 gcgaaagcgc gggtgctccg gatcagacag atcgatccac cgccagggga tggcgcggac
     1141 tcgagaccgc tgccggagac ccagcgactg gaacgtcggg agctgcgccg tcaggctgaa
     1201 gagccatgcc ctgaagccaa gctcccccaa aaccacgtcg gtaaccacgt agtcctcgcc
     1261 atcgggttcg gcgcggagat cgtcgatccg gccgaccgcg cggccggcgg cggtgcgcac
     1321 cactcgtccg agcagatgtt ccaggcgaac ttcgcgtccc gccataatca tgctcccggt
     1381 atgtgccgga ggatgtgatc ccggacccag tgctcccaag gcatcacctc gtctgcagcg
     1441 acatccactt tcacgtcgac cccgatcttt ttcaccttgg accaggggat gcggaacggt
     1501 tcggaggcca tgggtccgca acgccgggtg agacgagcgg ccacccgttc gatccaggga
     1561 tggagtcgcc aggccaggat gtggccgccg gtgaggatcg ccgcaaccct aggcggcccc
     1621 tcgtccgtga gctccagcac gataccgtcg accttgccga tattgagatt gctgcgatcc
     1681 accagctgct gatccagcac ctgtcggccc aggtccattt caccctccca tgagctgcag
     1741 gggaatggcc accagcgcga tgatcgatgc cagcagactg atcgcgatga ccgcggcgtt
     1801 gctgatccac ccgttgccat gctcgccgac gtagtcgccg tcgttcatca gcactagaaa
     1861 tggaaaggtg acgatcggga gcgtgagcga ggtcagggcc atggagaaca gcgtcagctt
     1921 caggggatcg agacctgcaa ccatcagcac cgaggcagcc gcgagcatga tggtgtaggt
     1981 gagactgaac cgcgcggcgt cgtgcgcatg cacgctctct ccccagttcc agcccaggcc
     2041 ctgggcaaag gaatacgctg tggccaaact aatctcgagt gctgcgccga gacagctgat
     2101 gaagagagta gcggcaaaga ggtagaagcc cggccgcccc agggtgtt
//
LOCUS       DASRPQ010000307         1978 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_973852, whole genome shotgun sequence.
ACCESSION   DASRPQ010000307 DASRPQ010000000
VERSION     DASRPQ010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1978
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_973852"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="VFD73_03530"
     CDS             complement(<1..184)
                     /locus_tag="VFD73_03530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73090.1"
                     /translation="MNRISFALACAVLALAGCKPSTPGAGNERGQASTPDGSAAAGQP
                     LTIAFMPKSKGNAYFIA"
     gene            complement(323..1498)
                     /locus_tag="VFD73_03535"
     CDS             complement(323..1498)
                     /locus_tag="VFD73_03535"
                     /inference="COORDINATES: protein motif:HMM:TIGR02603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73091.1"
                     /translation="MPRSLAGLQTRLRPGRAVLLFAILVLLTGSFSRADDAADRLTLA
                     VDALTRLEGIDLQANPAMKERVLLVLAKTRGTANFVRLVRHFSLPDQDPGLLDVAVAL
                     PKDEYGVEAIRMLLADGRTNLLAATLAMGGPSAVALAEALGNSGQRDAVKVLLPALSP
                     AKANLTNVNAGTAELQNQIVRSLTRSADGARQLLALAQADQLKEPLRKTALDELAQVH
                     WETIKADALKLRGQSDVKMPAMSELVKMSGNRERGQSVFFRASPGCFNCHVVHGKGTD
                     LGPNLSEIGGKLAREALFQAILEPSAGISFGFEAFTVTLRDGDEAYGLIASETATELA
                     LKTVGGVVARYKKSEIASRQKSTLSLMPAGLEAGLTPQEMVDLVEFLSSLKKGTGSE"
     gene            complement(1621..>1978)
                     /locus_tag="VFD73_03540"
     CDS             complement(1621..>1978)
                     /locus_tag="VFD73_03540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73092.1"
                     /translation="FLIVLAPYFFPLYAILVVGGFALGHLLFGWHSYRVWFHLLLGAA
                     YAFHLTLTWHILQTRQSDITSQGYLFSGVVIFLGNIVVLLVGLPLLTSQVGLITVFSW
                     WLQSTAALLQWVTRLL"
BASE COUNT          389 a          585 c          680 g          324 t
ORIGIN      
        1 aggcgatgaa gtaggcgttg cccttgctct tgggcatgaa cgcgatggtc agcggctggc
       61 ctgcggcggc ggaaccgtcc ggggtcgaag cctggccgcg ttcattcccg gcgccggggg
      121 tggaaggctt gcagccggcc aaggccagga cggcgcaggc gagagcgaaa gagattctgt
      181 tcatacgtgg tttaatgggc ccgatgtcac cacgacccac ctggccaagg cgagcaattg
      241 ctgcagccat tgccggtgca ttggaccgga gcgcagccgg aacagagacg gcgcggagct
      301 gcgctcccgt tgcgtccctc aactactccg agcccgttcc ctttttaagc gaggagagaa
      361 actccacgag gtcgaccatt tcctgcgggg tcaagccggc ttccagaccg gcgggcatga
      421 gcgagagcgt cgatttttgc cgcgaggcga tctcggactt tttgtagcgc gccaccacac
      481 cgccaaccgt cttgagggcc agttcggttg ctgtttcgct ggcgatgagg ccgtaggctt
      541 cgtcgccgtc ccggagcgtg acggtgaacg cttcaaaccc gaacgagatc ccggcgctgg
      601 gctcgaggat ggcctgaaag agcgcttccc tggccagttt gccgccaatt tcggatagat
      661 tcgggcccaa atccgttcct ttaccgtgaa cgacatggca attgaaacat ccggggctgg
      721 cgcgaaaaaa caccgactga cccctttcac gattccctga cattttcacc aactcggaca
      781 ttgcaggcat ctttacgtcg gactgacccc tcagcttcaa tgcgtcggcc ttgatggttt
      841 cccagtgcac ttgggcgagt tcgtccaggg cggtttttcg gagcggttct ttgagttgat
      901 ccgcttgagc cagcgcgagc aactggcgtg cgccgtcggc actgcgggtc agcgagcgga
      961 cgatctgatt ctgcaattcg gccgtgcccg cgttgacgtt ggtgaggttg gccttggctg
     1021 gcgaaagggc gggcaggagc accttcacgg cgtcgcgttg cccgctgttg cccagggcct
     1081 cggccagagc cacggccgac gggccgccca tggccagcgt ggccgcgagc aggttggtgc
     1141 gtccgtcggc cagcagcatg cggatggctt caacgccata ctcatccttg ggcagcgcga
     1201 ccgccacgtc cagcaagccc gggtcctggt ccgggaggga gaaatggcgg accaagcgga
     1261 cgaaattcgc cgtcccgcgg gtcttagcca gcaccagcag cacgcgctcc ttcatcgccg
     1321 ggttggcctg gagatcgatg ccttccaacc gcgtcagggc gtcgacagcg agcgtcaggc
     1381 gatcggcggc gtcatccgcg cggctgaacg agcctgtcag cagaacgagg atggcgaaca
     1441 ggagaacggc cctgcctggg cgcagtcggg tctgaagccc ggcgagcgaa cgcggcaaaa
     1501 ccaaaactcg ttccacagat ggggcacagc gcataaccgg ttgagcgtcc catggagagc
     1561 ggaggccgga caagccggga gttccggact tcggggacga caggcgacgg cacggccggc
     1621 tcacagcagg cgggtcaccc attgcaacag cgcggcggtg gactgcagcc accaggagaa
     1681 caccgtgatc aatccgacct gggaggtgag caggggaagc ccgacgagca ggaccacgat
     1741 attgccgagg aagatgacga cgccggaaaa gaggtaaccc tggctggtga tgtccgactg
     1801 gcgggtctgc aggatgtgcc aggtcagcgt gaggtgaaag gcgtaggcgg cgccgagcag
     1861 gagatggaac cagacgcggt acgagtgcca gccgaagagc aggtggccga gggcaaaccc
     1921 accgacgacc aggatggcat agagcgggaa gaagtacggc gcgaggacga tgaggaag
//
LOCUS       DASRPQ010000308         1603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4421637, whole genome shotgun sequence.
ACCESSION   DASRPQ010000308 DASRPQ010000000
VERSION     DASRPQ010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4421637"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..212
                     /locus_tag="VFD73_03545"
     CDS             <1..212
                     /locus_tag="VFD73_03545"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HZI73093.1"
                     /translation="GREGRVWMSYVVDSTGLSQTGTLRALLSDDPLFTQAAMNAVLHS
                     KFRPALRGGRPVRQRVFQAIVFRQR"
     gene            280..672
                     /locus_tag="VFD73_03550"
     CDS             280..672
                     /locus_tag="VFD73_03550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73094.1"
                     /translation="MQTRVVSNIHRLTFRHTARAMFQHGLALVSLVLLALGLGMAIYH
                     WSAHLPWTDAFLNASMILGGMGPVDRLSSSTAKLLAGVYALFSGLVFLVVAGAMLGPL
                     VHAVLHRFHAEPLEEQRTGHKETRSGHR"
     gene            730..1077
                     /locus_tag="VFD73_03555"
     CDS             730..1077
                     /locus_tag="VFD73_03555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73095.1"
                     /translation="MAHRERLERVFIGFHVVLGLALLWGSVHTVLHLGPTDLHARIIG
                     TIEGVGAAAFLLPATLRAGAGLLLFSLIGAILVHATQGELRPDLVVYAAGVLLVLVHG
                     SAYRPGAAEISAA"
     gene            1110..>1603
                     /locus_tag="VFD73_03560"
     CDS             1110..>1603
                     /locus_tag="VFD73_03560"
                     /inference="COORDINATES: protein motif:HMM:NF017464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase N-terminal
                     domain-containing protein"
                     /protein_id="HZI73096.1"
                     /translation="MNRICRHPLGSLVTLALLATPLAAWAQSDHTASSVGIDLAGMDR
                     SVKPGDDFFAYANGTWIKQTDIPPDKSSYGAGGILADSTDRQVADLIQTMARSSSGTA
                     EQEKIGDYYAAFMDTTAIDAAGLKPLQPTLDSIEAIQDRKGLASFLGTTIRADVDALN
                     ATNF"
BASE COUNT          281 a          496 c          496 g          330 t
ORIGIN      
        1 atggccgtga gggccgggtg tggatgtcgt acgtggtgga ctcgaccggc ctcagtcaaa
       61 ccggaactct tcgtgcgctc ttgagcgacg acccgctgtt tactcaggca gcaatgaacg
      121 cggtgctcca cagcaagttc aggcccgctc tccgcggggg ccggccggtg cgtcagaggg
      181 tatttcaagc aatcgttttt cggcagcgtt agcggccgca ggcgccgccg ctgggggcgt
      241 gttgccccgc gatgggacca agggaccaat ggaggcccaa tgcaaacacg ggttgtgtcc
      301 aacattcacc ggctgacatt ccgacatacc gctcgggcca tgtttcaaca cggcctggcg
      361 ctggtctcgc tggttctcct cgcgctcggt ctgggcatgg ccatctatca ttggtcggcg
      421 cacctgccct ggaccgatgc gttcctcaat gcctccatga tcctgggtgg gatgggaccg
      481 gtcgatcggc tctccagctc taccgcaaag ctgctggccg gggtgtacgc gctgttctcc
      541 ggattggtct ttctggtcgt cgccggagcg atgctgggac cgctggtcca tgcggtgttg
      601 caccgtttcc atgccgagcc cctggaggag cagcggaccg gccacaagga aacccggagt
      661 gggcaccggt gacacaaatc cacggctgat ttcgtccaat cgatggtacc cgttcccttc
      721 ggaggttcca tggcccatcg cgagcgcctc gagcgagtct tcattggctt ccatgtggtg
      781 ttgggcctgg cactgctctg gggcagcgtc cataccgtgc tccacctggg ccctaccgat
      841 ctccacgccc gcatcatcgg cacgatcgag ggtgtcggag ccgcagcgtt tctcctgccg
      901 gctacgcttc gggctggcgc tggactcctg ctcttcagtc tgatcggagc gatactggtc
      961 catgcgactc agggggagct caggcccgat cttgtggtct acgcggccgg tgtgctgctg
     1021 gtgctggtgc acggaagcgc ataccgccca ggagcggctg agatctcggc ggcctgaacc
     1081 atctactgct ttcaaccaat ggatctgtca tgaataggat ttgtcggcac ccgctcggct
     1141 ctctggtgac gctcgccctg ctggcgactc ctcttgccgc atgggcccag agcgaccaca
     1201 cagcgagctc agtaggaatt gatctggcgg gcatggaccg gtcggtcaag ccgggcgacg
     1261 atttctttgc gtatgccaac gggacctgga tcaaacaaac cgacattccg cctgacaaga
     1321 gttcgtatgg agcgggtggc attctggcgg acagtaccga tcgtcaggtg gcagacctta
     1381 ttcaaacgat ggccagaagc tcctcaggaa cggcggaaca agagaagatc ggcgactact
     1441 atgccgcgtt catggacact accgccatcg atgccgccgg tctcaagccg ctgcaaccca
     1501 ccctcgactc catcgaagcg attcaggatc gaaagggcct tgcgagcttc ctgggcacga
     1561 ccatccgggc cgacgttgat gccctgaatg caacaaactt tta
//
LOCUS       DASRPQ010000309         1571 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3798674, whole genome shotgun sequence.
ACCESSION   DASRPQ010000309 DASRPQ010000000
VERSION     DASRPQ010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3798674"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(19..432)
                     /locus_tag="VFD73_03565"
     CDS             complement(19..432)
                     /locus_tag="VFD73_03565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73097.1"
                     /translation="MNRTQVINNTLKEFRQNVPDYVASGFVDMSTGMLLAVDTVDNHP
                     REILDVLAAATADLFQGKNVTQIEALWNQYRGVSEGGNYFKEILINSDNLVHLFLRSA
                     SNPEVTAVIVCTRQVSIGMLFAQARAVLKEYDAAG"
     gene            775..>1571
                     /locus_tag="VFD73_03570"
     CDS             775..>1571
                     /locus_tag="VFD73_03570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73098.1"
                     /translation="MRKQISAELSILAQQRASGALEIIGNPGGMVFLSGGYLTYAESP
                     SIPDLRTRLIRSQRITVDRWNDIIASDQDHGGVGALLVSGDVISRGELRDLLWSVALD
                     ALVALTLPRPTGSQVRVRFWPRRSHWVGSLLRLDVASVWADVRRKTERLARREIPAEG
                     CPQLHRMTRPWAVVRSEQWAIAWQLDGLATVRDLAWRNGYALYDTLELVGDLVQAGLC
                     TVNPPVAVAVPVTALPAPTELPPATEPSPTELSPATELSPATELPSVP"
BASE COUNT          263 a          491 c          512 g          305 t
ORIGIN      
        1 gccgcccagc tccgggggtc agccggcggc gtcgtactcc ttcaggaccg cccgagcttg
       61 cgcgaagagc atcccgatgc tcacctggcg tgtgcagaca atgactgcgg ttacttcggg
      121 attgctcgcg ctccgcagga aaaggtgcac caggttatcg ctattgatca ggatttcctt
      181 gaagtaatta ccgccctcgc tgacgccgcg gtactgattc cagagcgcct cgatctgggt
      241 aacgttcttg ccctggaaaa gatcggccgt cgccgccgcg agcacatcga ggatctcccg
      301 tggatgatta tcaacagtat ccactgcgag aagcattccg gttgacatgt cgacgaatcc
      361 agaagcgacg taatcgggga cgttctggcg gaattccttg agcgtgttat tgataacctg
      421 agtgcggttc accggtgtgc ctctctgcgc cgtgcggtgg ttctggatag cggtaaccta
      481 ggatgccatg accgagacgt gcaggtggga ggcttgttga ccttggtcgg atcgagacga
      541 aaaaaacgtt tgtcagtggc tagaccgtta cgcaaagtaa gtatcaagcg cggtctgcga
      601 gtttccggga cccgttttgc gtagtcccgt ggtgacgcgg gcggcaacag ttatacgctc
      661 tgctcggcca ctggccggcg caggacatcc agtgatgcgc agcaacgggc tggggtgccg
      721 gttgggggct gcggacggag gaagtgggtt cggctgagcg caccagaagt aaacatgaga
      781 aagcagattt ctgctgagct ttccatactc gctcagcagc gtgcctccgg cgcgctcgag
      841 attatcggga atccgggcgg aatggtattt ctgagtggtg gctatctcac ctacgctgag
      901 tcgccgtcga tccccgacct gcggacccgc cttatccgct cgcagcggat aacggtcgac
      961 cgctggaacg acataattgc cagcgaccag gaccacggcg gcgtcggcgc cctgctggtg
     1021 agcggcgacg tcatcagccg gggtgagctg cgggatctgc tctggtcggt ggcgctggac
     1081 gcgctcgtcg cgctgacctt gccgaggccg accgggtcgc aggtccgcgt ccggttctgg
     1141 ccgcgccggt cgcactgggt cgggtcgttg ctgcgcctcg acgtcgcctc cgtctgggcc
     1201 gacgtcaggc ggaagaccga acggctggcc cgccgcgaga tccccgccga aggctgtccg
     1261 cagctgcacc ggatgacgcg cccctgggcc gtggtcagga gcgagcagtg ggcgatcgcc
     1321 tggcagctcg acgggctcgc caccgtccgt gacctggcct ggcggaacgg ctacgcgctc
     1381 tacgacacct tggagctggt cggcgacctg gttcaggccg gcctgtgcac ggtcaatccc
     1441 ccggtcgcgg tggccgtccc ggtcaccgcg ctccccgcgc ccacagaact tcccccggcc
     1501 acagagcctt ctccgacaga gctttctcct gccacagagc tttctcctgc cacagagctt
     1561 ccctcggtcc c
//
LOCUS       DASRPQ010000310         1156 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4107987, whole genome shotgun sequence.
ACCESSION   DASRPQ010000310 DASRPQ010000000
VERSION     DASRPQ010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1156
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4107987"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..801
                     /locus_tag="VFD73_03575"
     CDS             <1..801
                     /locus_tag="VFD73_03575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73099.1"
                     /translation="YAAERAAKVAASLPSAQPDWLGAVPAVTGGIQVIRDSYGTRLGI
                     IAGFSYPDRAEPVTWLLDIDGGGFITIAGARTFGSPDEAAEAWRAVVGQSADSAVPSA
                     VDADALMFLAACVQSDQFVGGRESRSRMDNWYRAYRRLDDIVKALSERGMELPWEGTR
                     TPRAQPVNPAPMIGEFTAWYTGRRGQAPDAEIVEEVAGEWLDCVVPGTERLISPTRTT
                     LFRALIGDWRKPYATPGLDLLTEWVRWLGEESGLPEALIEQALGGDHG"
BASE COUNT          194 a          370 c          401 g          191 t
ORIGIN      
        1 tacgcggccg agcgggcggc gaaggtggcc gcttccctgc cctccgcgca gccagactgg
       61 ctcggtgccg taccagcggt gactggtggc atccaggtga tccgggactc ctatggcacg
      121 cgccttggca tcatcgccgg attcagctat ccagaccggg cagaaccggt cacgtggctg
      181 ctggacatcg atgggggtgg cttcatcacc atcgcagggg ccaggacgtt cggttcgccg
      241 gacgaggccg ccgaggcatg gcgcgcggtg gtggggcaga gcgcagactc ggctgtgccg
      301 agtgcggtcg atgccgacgc gctcatgttc ctggctgcgt gtgtgcagtc ggatcagttc
      361 gtcgggggtc gcgaatcgcg ttcccggatg gacaactggt accgggccta ccgacggctg
      421 gatgacatcg taaaggcgct gtcagagcgt ggcatggagc tgccctggga gggcacgcga
      481 accccgcggg ctcagcccgt caatcccgcg cccatgatcg gtgagtttac cgcctggtac
      541 accggcaggc gcggtcaggc accggatgcc gagatcgtcg aagaggtcgc gggagagtgg
      601 ctcgactgcg tcgtgcccgg tacagagcgg ctgatctcac cgaccaggac aacgctcttc
      661 cgcgctttga tcggagactg gcgcaagccg tacgccaccc ccgggttgga cctgctcacg
      721 gaatgggtcc gctggctcgg ggaggagtcc gggctgccgg aggcactgat cgagcaggct
      781 ctgggaggcg accatggatg atctgccgca cattctcgtg cgcagttccg tactcaagcg
      841 ccagctgtcg acttggggcg cgacggcaca accagacggc tcgaggccca gtaacacctc
      901 cccgacgtac ccggtgtgcc gtcagtcggc ccaggtgtcc ggcatgccga gttgctcgca
      961 gagccagacg gcgaggcccg tcgggttgtc acgaggaccc gcgcatccct gtacgccccc
     1021 agggaggcag gcctcaccga cagcctgttc agtaagacag gcttcaccga tgatctggca
     1081 gccgaagcgg ccgccagcgg aggcaggatt ctccttctca ccttggacga actctacggc
     1141 cagtcgtcat aaccag
//
LOCUS       DASRPQ010000311         2788 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_660919, whole genome shotgun sequence.
ACCESSION   DASRPQ010000311 DASRPQ010000000
VERSION     DASRPQ010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2788
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_660919"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..919)
                     /locus_tag="VFD73_03580"
     CDS             complement(<1..919)
                     /locus_tag="VFD73_03580"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR01930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HZI73100.1"
                     /translation="MSDAFITAAVRTPVGRAGGVLAEVRPDDLAAVALRGVIQRGGIP
                     ADRIDDVILGCANQAGEDNRNVARMAVLLAGLPVEVPGQTVNRLCGSGLQAVTAATHA
                     IRAQEGDLFLAGGVESMTRAPQVMLKSGRAWDRTPPVIADSTVGWRFVNPRMPREWTI
                     SLGETAEKVGAIYGISRKEQDEFALKSQRRAAAAIAAGVFETEIIPVELPGQPGKQIC
                     QDEAPRPDVTLQSLEQLKPAFTRDGTVTAGTSSGINDGAAALSIVSRDALEELHLQPI
                     ARVVATAVAGVDPSCMGLGPVPATRKALHR"
     gene            983..1070
                     /locus_tag="VFD73_03585"
     tRNA            983..1070
                     /locus_tag="VFD73_03585"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1017..1019,aa:Ser,seq:gga)
     gene            1276..2184
                     /gene="msrP"
                     /locus_tag="VFD73_03590"
     CDS             1276..2184
                     /gene="msrP"
                     /locus_tag="VFD73_03590"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016667 - oxidoreductase activity, acting
                     on a sulfur group of donors [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HZI73101.1"
                     /translation="MLIRRPPDIPNSEITDESLFWNRRSFIKAAGLGAAAITLLPRGW
                     RRLEGNTDDKLTPYEDVTGYNNFYEFGTDKGDPKANATHFRTQPWKVEVAGEVNKPAS
                     YNLDDLLKGFTPVERVYRHRCVEAWSMVVPWLGIPLGGIIDKLGPTSKAKFVEFTTIL
                     DPSQMPGQRSNILPWPYVEALRMDEARHPLTMLVTGLYGKPLPNQNGAPLRLIVPWKY
                     GFKGGKSIVKIRFTEQQPMTTWNIAAPNEYGFYANVNPEVDHPRWSQARERRVGEFFK
                     RKTLMFNGYADQVASMYAGMDLRKNF"
     gene            2195..>2788
                     /locus_tag="VFD73_03595"
     CDS             2195..>2788
                     /locus_tag="VFD73_03595"
                     /inference="COORDINATES: protein motif:HMM:NF013918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HZI73102.1"
                     /translation="MTRVQVITRVVKPVLYVAAVLPLGWLMFALFSGIVMGDQVKFMQ
                     HVTGDTVLSCLMLTLAITPLRRLTGWNEIIRVRRLIGLTAFWYACLHLTTYVVFDQDF
                     SLMEITKDIAKHPWVLVGFTGFLCLLPLAITSTNGWIRRLGGKNWNRLHRLVYVAAIA
                     GVLHYLWLVKKDIHYPLVYGAVLTVLLLTRVWYAAARP"
BASE COUNT          482 a          879 c          886 g          541 t
ORIGIN      
        1 cgcggtggag tgccttgcgg gtggcgggca ccgggcccag ccccatacag ctggggtcga
       61 ctccagcgac cgcagtggca acaactctcg cgatcggctg gaggtgcagc tcctccagag
      121 catcgcgact gacgattgaa agggcggcgg cgccgtcgtt gatcccgctg gaggttccgg
      181 cggtaacagt gccgtccctg gtaaaggcgg gcttcagctg ttccagcgac tgcagcgtga
      241 catccggccg cggtgcctcg tcctggcaga tctgctttcc gggctgaccg gggagctcga
      301 ctggtatgat ctcagtctcg aacacaccag cggcgatagc ggccgcggct cggcgctggc
      361 tcttcagggc aaactcatcc tgctctttcc ggctgatacc gtagatggcg ccgacctttt
      421 cggcggtttc tccgagcgag atggtccact cccggggcat ccgcggattg acgaaccgcc
      481 agcctacggt tgaatcggcg atgactggag gcgtccggtc ccaggcacgg ccgctcttga
      541 gcatgacctg gggagcccgg gtcatgcttt cgactccgcc ggcaaggaag agatctccct
      601 cttgcgctct gatggcgtga gttgcggcgg tcactgcctg gagccccgag ccgcagagcc
      661 ggttgacggt ctgcccggga acctcgactg gcaatccagc gagcagcacc gccattcgag
      721 cgacattccg attgtcctcg ccggcctgat tggcgcagcc gagtatgacg tcgtcgatcc
      781 gatcggcagg aatgccgccg cgctggatga cgccccggag ggccacggcg gcaaggtcgt
      841 cgggccggac ctcggccaga accccgccgg cgcgccccac cggggtccgc acggccgcgg
      901 tgatgaaggc gtcgctcacc ccacgttcct cacgttgaac ttcctctctc agagggctaa
      961 gttgccgccc ggcaacggtt caggacaggt ggccgagtgg tttaaggcgc acgcctggag
     1021 agcgtgtata cgtcaaaagc gtatcgaggg ttcgaatccc tccctgtccg tgctggtcgg
     1081 gacaccgaac agcgtgagcg ggacaatgac aagcgtgagc ggagccggat gcgggcggag
     1141 cactagttgt agctctgcca gggaactgtt ttccgcctac cggcgtatct taagtgatat
     1201 gtgaagacga gtgacagggc ggtcccgctc acgctcgtcc tttcccgctc acgcttgtcc
     1261 tcgtcccggg gtcgtatgtt aatccgccgt cctcctgaca ttcccaactc cgagatcact
     1321 gacgaatcgc ttttctggaa ccgtcgcagc ttcatcaagg cggcgggact gggcgcggcc
     1381 gccatcacgc tgttgccacg gggctggcgt cgcctcgagg gcaacaccga cgacaagctc
     1441 acgccgtacg aggacgtgac cggctataac aacttctatg agttcggcac cgacaagggc
     1501 gatccgaagg ccaacgcgac ccacttccgt acccagccgt ggaaggtcga ggttgcggga
     1561 gaggtaaaca agccggcgag ctacaatctg gatgatctgc tcaagggctt taccccggtc
     1621 gagcgagtgt accggcaccg ctgtgtcgag gcctggtcga tggtggtgcc gtggctcggc
     1681 attccgcttg gcggcatcat cgataagctg ggtcccacct ccaaggccaa gttcgtggag
     1741 ttcaccacca ttttggaccc gtcgcagatg ccgggtcagc ggagcaatat tctcccgtgg
     1801 ccctatgtcg aggcgttgcg gatggacgag gcccggcatc cgctcacgat gctcgtcacc
     1861 ggattgtacg gcaagccgct ccccaatcag aacggcgctc cgcttcggct catcgtcccc
     1921 tggaagtacg ggttcaaggg cggcaagtcg atcgtgaaga tccgctttac cgaacagcag
     1981 ccgatgacca cctggaacat cgctgccccc aacgaatacg ggttctacgc caacgtgaac
     2041 cctgaggtcg accatccgcg ctggagccag gcgcgggagc gcagggtagg ggagttcttc
     2101 aagcgaaaga cgctcatgtt caacggctac gccgaccagg tcgcctcgat gtacgccggg
     2161 atggacctcc gcaagaactt ctgattccgt caccatgacc cgagtccagg tgatcacgcg
     2221 ggtggtcaag cccgtgctgt atgtcgccgc ggtgctgccg ctcggctggc tcatgtttgc
     2281 gctgttcagc gggatcgtca tgggcgatca ggtcaagttc atgcagcacg ttaccggtga
     2341 caccgtgctg tcctgtctca tgctcacgct cgcgatcact ccactgcgcc ggctgaccgg
     2401 ctggaacgag atcatccggg tgcgccggct gatcggactc accgctttct ggtacgcctg
     2461 tctccacctc accacctatg tggtgttcga tcaggacttc tccctgatgg agatcaccaa
     2521 ggacatcgcc aagcacccgt gggtcctggt cgggttcacc ggctttcttt gtctgctgcc
     2581 tctggcgatc acttcgacga acggctggat ccggcggctg ggcgggaaga actggaatcg
     2641 gttgcaccgg ctggtgtacg tcgcggcgat cgcgggtgtg cttcactatt tgtggctggt
     2701 gaagaaagac attcattacc cgctggtgta cggtgccgtg ctcacggtgc tgctgctcac
     2761 tcgcgtctgg tacgcggcgg cccgacct
//
LOCUS       DASRPQ010000312         1922 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3481268, whole genome shotgun sequence.
ACCESSION   DASRPQ010000312 DASRPQ010000000
VERSION     DASRPQ010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1922
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3481268"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..838
                     /locus_tag="VFD73_03600"
     CDS             <1..838
                     /locus_tag="VFD73_03600"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HZI73103.1"
                     /translation="TSNVSGGTTLLKMADLNQVQVRTLVDETDIGKLQPGLLATVTVD
                     AYPQRPFSGTVLKIEPQAQTEQNVTMFPVLVRIDNKEGLLRPGMNAEVEVHVGQRQNV
                     LAVPNAALRTPRDVGSAAQVLGLSPDNVQKQLAAAAPASGAPGAAGVRGDSSGSPDSA
                     GHATMGATPGGAARGSFAGRGGVRGRRGQAQGEGARYIVFVKKNGQPTPVWIRTGLTD
                     MDYSEVRQGLSESDSVLILPSQSLVQSQQDMKERFNRVTGGGAVPGMRQQTQPSGGAP
                     RP"
     gene            841..>1922
                     /locus_tag="VFD73_03605"
     CDS             841..>1922
                     /locus_tag="VFD73_03605"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI73104.1"
                     /translation="MLVGETVAVALQSIRANMLRSMLTMLGIIIGVGAVITMVALGNG
                     AQKAVQDRIAALGANVLTVTAGQAMFGGIRITDRTILSTDDYDALLRDAHLLKAVVPE
                     MQQSLQVKYGNQNSNLNIVGTTANYTTVKNYTLPYGRMFTEGEDQARQRYAVLGASVP
                     RMLGGNPAGMIHQTLLIRGIPFEIIGVLSEKGSAGGFGNPDEQILIPLETARYRVFGS
                     NRLRSFSVQVKDSVPVEQGMVDLERVLRREHKIRPGGENDFTIRNQQDVLATQEQATQ
                     VFTSLLASIAAVSLLVGGIGIMNIMLVSVTERTREIGIRMAIGARRLHILLQFLVESA
                     LLSIVGGLAGALLGIAASKIPSSLAN"
BASE COUNT          360 a          601 c          628 g          333 t
ORIGIN      
        1 cacttccaac gtgagcggcg gaacgaccct tctgaaaatg gccgatctca accaggtcca
       61 ggtcaggacg ctggtggatg aaaccgatat cgggaagctt cagcccggtc tcctggcaac
      121 cgtcaccgta gacgcatacc cgcaacgtcc gttctcggga acggtgctca agatcgagcc
      181 gcaggcccag accgagcaga acgtgaccat gttcccggtg ctggtacgga tcgacaacaa
      241 ggaagggctg ctgcggcccg ggatgaacgc cgaagtcgag gttcacgtgg gacagcggca
      301 gaacgtcctc gcagtgccta atgctgccct ccgcaccccg cgtgatgtcg gctccgctgc
      361 ccaggtgctg ggcttgtcgc cggacaacgt gcagaagcag ctcgccgcgg cggcgcccgc
      421 ttccggcgct cctggcgccg ccggtgttcg cggcgactcc tctggatctc ccgactccgc
      481 cggccacgcg acgatgggtg cgactccggg cggagcggcg cgcggctcgt tcgccgggcg
      541 cggcggtgtg cgcgggcgcc ggggacaagc tcagggtgaa ggggcccgct acatcgtgtt
      601 cgtcaagaag aacgggcagc ccactcccgt ctggatccgc accggcctga ccgacatgga
      661 ctacagcgag gtgcggcagg gtttgagtga atccgactcg gtgctcatcc tgccgagtca
      721 gagcctggtc caatcgcagc aggatatgaa agagcgcttc aaccgggtga ctggtggtgg
      781 cgccgtcccc ggtatgcggc agcaaactca gccgtccggc ggcgctccga ggccctgacc
      841 atgctcgttg gagagaccgt cgccgtagcg ctgcagtcca tccgagccaa catgctccgc
      901 tcgatgctca ccatgctcgg catcatcatt ggtgtcggcg cggtaatcac gatggtggcg
      961 ctggggaacg gcgcgcagaa ggccgtccag gaccggatcg ctgccctggg agccaacgtg
     1021 ctgacggtca ccgcgggtca ggcgatgttc ggaggcatcc ggattacgga ccgcaccatt
     1081 ctgagcaccg acgattacga cgctctcctt cgggatgcgc acctgctcaa ggcggtggtc
     1141 ccggagatgc agcagtcgct gcaggtcaag tacggcaatc agaacagcaa cctcaacatc
     1201 gtgggcacca ccgcgaacta caccacggtc aagaactaca cccttccgta tggcaggatg
     1261 ttcaccgagg gtgaggacca ggctcgccag cggtatgccg tgctgggtgc ctccgtcccg
     1321 cggatgctgg gcggcaaccc agccggcatg atccaccaga cactcctgat ccgcgggatc
     1381 ccattcgaga tcatcggagt gttgagtgag aagggatccg ctggcgggtt cggcaacccc
     1441 gacgaacaga tactgatccc gctggaaact gcgcgctatc gggtcttcgg gagcaaccgg
     1501 ctccggtcgt tctcggtcca ggtgaaggac agcgttccag tcgaacaggg catggtggac
     1561 ctggaacggg tcctccggcg ggaacacaag atccgtcccg gcggcgaaaa cgatttcacc
     1621 atccgcaatc agcaggatgt tttggcgaca caggagcaag cgacccaggt cttcaccagc
     1681 ctgctggcaa gcatcgccgc cgtaagcctt ctggtcggcg gcatcgggat catgaatatc
     1741 atgttggtgt ccgtgaccga gcgcacccgg gagatcggta tcaggatggc gatcggggcg
     1801 cgccggctgc atatcctttt gcagtttctg gtcgaatccg ctctgctaag cattgttggc
     1861 ggattggccg gggcgctgtt ggggatcgct gcctcgaaga ttccctcaag tctggcgaat
     1921 tg
//
LOCUS       DASRPQ010000313         1674 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1287688, whole genome shotgun sequence.
ACCESSION   DASRPQ010000313 DASRPQ010000000
VERSION     DASRPQ010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1287688"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            166..498
                     /locus_tag="VFD73_03610"
     CDS             166..498
                     /locus_tag="VFD73_03610"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: protein motif:HMM:NF012785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HZI73105.1"
                     /translation="MSISIRVVDCIYGLPAVGVPVEVTRELEGTVIQQWRNHTGDDGY
                     VPVRSGAMQGRGSYTLEFDLEGYFRKLGYAPLNSAISVRLRLASDSHHYGLSMLITPS
                     SCITFRQD"
     gene            505..921
                     /locus_tag="VFD73_03615"
     CDS             505..921
                     /locus_tag="VFD73_03615"
                     /inference="COORDINATES: protein motif:HMM:NF014273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HZI73106.1"
                     /translation="MTVELCAPDETAAIEALHNAELLPVASLCPADSPRLNGISHRHA
                     EVLAKSKGELPAILVQRGTMRVIDGMHRVRAALLGGCDSIAARFADVADDAAFLPAVE
                     ANTAHSLPLSLADRKEVRPVSGVAAAIEERDRLETT"
     gene            1172..>1674
                     /locus_tag="VFD73_03620"
     CDS             1172..>1674
                     /locus_tag="VFD73_03620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI73107.1"
                     /translation="MISEMLDLDEADIIIYSQVAQQFECTIDHLVKATGVPENEVRRS
                     LTRLVDAGLACSEQMGRYRATLDGPETVVERLRTEVDIQYGRQRSKITNLQSELTGLL
                     KRYPKLSSIHAGPSIDRIRNPETSSIRIAELMCGTRHEILRVRRPRSPQQARQDEAAE
                     EKALDRG"
BASE COUNT          360 a          519 c          537 g          258 t
ORIGIN      
        1 cacccggcac gccgccgcgc tcctccccgg ctcctggcgc gggcgcagtt gctgagcgcg
       61 gcgggagcac cgtgagagcg ggtgagaagc cgtgccgccc agcatgggat tgaaggtcat
      121 ggaacacgcg gcgggcttac cagatttcga gggctacgcg agacgatgag catctctatc
      181 agggttgtgg actgtatcta cggcctgccc gcggtcgggg taccggtaga ggtcacacgt
      241 gaactcgaag gcaccgtcat ccagcagtgg cgcaaccata ctggcgacga cgggtacgtc
      301 cccgtgcgat caggggccat gcaggggcga ggctcctaca cactcgaatt cgatcttgaa
      361 ggctacttcc ggaagctggg atacgcgccg ctcaactcag cgatcagcgt tcggctccgc
      421 ctggccagtg acagccatca ctacggcctt tccatgctga tcacgccatc gagctgcatc
      481 actttcaggc aggactgact ccaaatgacc gtagagcttt gtgcaccgga cgaaaccgcg
      541 gctatcgagg cactccataa tgccgaactg ctgcctgtcg cgagcctgtg tccggccgac
      601 tcaccccggc tgaacggaat cagccatcgt cacgcggaag tgctcgccaa gtccaaaggc
      661 gagttgcctg ccatcttggt gcagcggggc accatgcgcg tcatcgacgg catgcaccgg
      721 gtccgcgcgg cgctgctcgg gggctgcgac agcatcgccg cgcgattcgc cgacgtggcc
      781 gatgacgccg cgttcctgcc ggccgtcgag gcaaataccg cgcacagcct cccgttgtcc
      841 ttggcggacc ggaaggaggt acgaccggtc agcggcgtcg ccgcggctat cgaagagcgc
      901 gaccggctcg agacgacgta acggtccagg cccactttcg acccggcgcc cccggggcca
      961 atgagcgaca gaccgccatc ccggtcgtgt catgggggcg tcgaacgaag ctaacgcgaa
     1021 cgttaggcga cgtagaacag aaggcaaaag aaaccacaag tccggctaga gccggaaata
     1081 gtccggccga cagttcagcg aatgccctca aggcaagctg catattcgac cgcaaatcct
     1141 taacgaagtc aacgctgaac cgggagcaga cgtgatatca gagatgctgg acctggacga
     1201 ggctgacatc attatctaca gccaggtggc ccagcaattc gagtgcacca tagatcactt
     1261 ggtgaaggcg acgggggtac ccgagaacga ggtcaggaga agcctgaccc ggctggtcga
     1321 cgcgggtctg gcatgtagcg agcaaatggg ccgctaccgg gcaacgttgg acgggccgga
     1381 aactgtcgta gagcggctgc gcaccgaggt cgatatccaa tacggacggc agcggagcaa
     1441 gatcaccaac ttgcaatccg agctgacggg cctactgaag cgctacccga agctgtcatc
     1501 catccacgcc gggccttcga ttgaccggat cagaaatccg gaaaccagca gtatccggat
     1561 agccgagttg atgtgcggca cccggcatga aattctgcgc gtccggcggc cgagatcgcc
     1621 gcaacaagcc cgacaggacg aggcggccga ggagaaggcg ctggaccgcg ggat
//
LOCUS       DASRPQ010000314         1860 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3798956, whole genome shotgun sequence.
ACCESSION   DASRPQ010000314 DASRPQ010000000
VERSION     DASRPQ010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1860
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3798956"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..498
                     /locus_tag="VFD73_03625"
     CDS             <1..498
                     /locus_tag="VFD73_03625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73108.1"
                     /translation="VVIGGSALTALGLVRRATRDVDLLAIADNGALRLAEPLPQPLLT
                     ARSAVAADFGLAENWLNAGPTNLLKWGLPEGFMSRVVTRSYGTALVVHFASRLDQIHF
                     KLFAMVDQGGGRHEADLRALGPTPGELAAAARWSITQDPSPGYRSVLVDALRVLGVED
                     ADLGD"
     gene            479..1489
                     /locus_tag="VFD73_03630"
     CDS             479..1489
                     /locus_tag="VFD73_03630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73109.1"
                     /translation="MLISEIRDEVSQELLGFAWRQWAQVGVSATIEGADRWAVDPEAL
                     ILFTIGIARRDPRLFDEMLDWMAFNHELLSTQRLRNLTGKFPLPPGLVAAVTTWTRQT
                     APVNLPVSDQTLPARDSEPVFRTDVLACVSKQDPVFAQHGFTRPPAVRTGKSHEPDLA
                     LPVNLSFRLRHLFGPGGRSEAMRVLLAWPVGPLDAARIADEAGFAKRNVSDVLTSLAA
                     SGVIKAVWAGNERHFTAYRERWAQLLNLAGPGMPSFVSWVHLLPAALQIIMWLDEKAD
                     TAESDYLIASQARSLVNRITRDLEAAGIDIPHQRPAHGTAYLSVFAEISRALLARLGT
                     AH"
BASE COUNT          344 a          611 c          580 g          325 t
ORIGIN      
        1 gtggtcatcg gcggttccgc gctgaccgca cttggcctcg tcaggcgcgc gaccagggac
       61 gtggatctcc ttgcgatagc cgacaacggc gcactacgcc tcgccgagcc gctgccgcaa
      121 ccactcttga ccgcgcgatc ggctgttgcg gccgacttcg gactcgccga gaactggctg
      181 aacgcagggc cgacaaacct gctgaaatgg gggctgcctg agggcttcat gagccgggta
      241 gtgaccaggt cctacggaac ggccctcgtc gttcacttcg ccagccgcct cgaccagatt
      301 cacttcaagc tctttgccat ggttgaccaa ggcggagggc gtcatgaggc tgacctccgg
      361 gcgctcggcc cgacgccagg agaactggcc gccgcggcgc gctggtctat aacgcaggat
      421 ccatcgcctg gatacagatc ggtcctggtg gacgctctgc gcgtcttggg ggtggaagat
      481 gctgatctcg gagattaggg acgaggtcag ccaggaacta ctcggcttcg cctggcgtca
      541 gtgggcccag gtcggcgtct cggcgaccat tgagggagcc gaccgatggg cggtcgatcc
      601 cgaggccctc attctcttca ccatcggaat cgctcgccgc gatccgcggc tgtttgatga
      661 gatgctcgac tggatggcgt tcaatcatga actcctgtcc actcagcggc tacggaacct
      721 gaccgggaag tttcccctgc ctccaggcct agtcgctgcc gttaccacgt ggacccggca
      781 gactgcgccc gtcaatctgc ccgtcagtga ccagacgctc cccgcccggg acagcgagcc
      841 agtcttcaga accgatgtcc tggcatgcgt ctcgaagcag gatccggtct tcgcccagca
      901 cggcttcacc cgtcccccgg ccgtgaggac cgggaagtcg cacgagcctg atctggccct
      961 tccagtgaac ctgtccttcc ggcttcgcca cctattcggg ccaggcggcc gctctgaggc
     1021 gatgcgagtg ctgctcgcct ggccagtcgg ccccctcgat gccgctcgga tcgccgatga
     1081 agcaggattc gccaaaagga acgtcagcga tgtcctgaca tccctcgcgg cttccggggt
     1141 catcaaagcc gtctgggcag gcaacgaacg ccacttcacc gcataccggg agagatgggc
     1201 gcagctcctt aacctcgccg gaccgggcat gccgtccttc gtgtcatggg tccacctgct
     1261 gcccgcagca ctacagatca tcatgtggct agacgaaaag gccgacaccg cagaatccga
     1321 ctacctgatc gccagccagg cccgcagcct cgtgaaccgc atcacccgcg atcttgaggc
     1381 cgcaggcatt gacatcccgc accagcggcc agcgcacggc actgcttacc tatccgtatt
     1441 cgccgaaatc agccgcgctc tcctcgcccg gctgggaact gctcactaac gagcagaatc
     1501 tgatgattag tgcgctgcag gcgcgcaagg gttcctcttt ctcagagtga cagcatcgcc
     1561 ctgatgccat gcgtgtctgg atgtcacgac cgtggcggga tgggcccgct tgatgaggaa
     1621 tgcgaagcgc aaggccttgc tgtacacccg gtaatcgcag aacgtatcag gtaggtcgta
     1681 atcgaggatc ggggtgtggg ccatggccgg gcgaaagcgc cagaagcctg acggagtggc
     1741 tggactcatc gccggtgcca taagcgaccg gcagaaagcc caggcgcaga accagcgcct
     1801 ggaggccagg gctcagatgg cgcgggcaaa ggagaacgcc aagacggcgg ctgcgaatgc
//
LOCUS       DASRPQ010000315         1639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_661281, whole genome shotgun sequence.
ACCESSION   DASRPQ010000315 DASRPQ010000000
VERSION     DASRPQ010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_661281"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..711)
                     /locus_tag="VFD73_03635"
     CDS             complement(<1..711)
                     /locus_tag="VFD73_03635"
                     /inference="COORDINATES: protein motif:HMM:NF014428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HZI73110.1"
                     /translation="MNARTLSIAMLAGLPLLYAGCGGDSLTLPSEGEPAQISIQSGSG
                     EAGRVGTQLGDSLVALVTDTQNRPVPGATVQFVLTDDRGGGTVTPASAQTGADGTAKA
                     KITLGSQAGQMQGQAQVPVPSGAAPIQAPFTAIVLSGDANGIAMVSGDGQSGAVGDTL
                     AAPLIVKVTDASGNPISGVPVTWSPEGQGSVSETTTVTGDDGQTSVLRILGPNAGQQT
                     TTATAQGLVGSPVTFTSTA"
     gene            complement(1006..>1639)
                     /locus_tag="VFD73_03640"
     CDS             complement(1006..>1639)
                     /locus_tag="VFD73_03640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73111.1"
                     /translation="PASQENVALTKMQGDEQTGAVGEVLGTPLIVKVVTQTQQPASGV
                     EVAFALSDPAGGTVTPPTATTNSDGEAVAMWTLGTVPGTYTATAQLVVAGGENQVTQF
                     QAIAIAGEPDTLAAQSPLAQPGLRNQPVSTPPQVRVVDRFGNPIPGVPVSWQVISGGG
                     QVNSPITASDERGLASVEWDLGNQRGVHKLTAAIDKATGSPVTFTATVLF"
BASE COUNT          288 a          516 c          530 g          305 t
ORIGIN      
        1 ggcggtggag gtaaaggtga ccggcgaacc caccagtccc tgggcggttg cggtcgtggt
       61 ctgctgtccc gcgttcggac ccagtattcg cagcaccgag gtttgtccgt cgtcgccggt
      121 gacagtcgtg gtctcgctca cgctgccctg cccctcgggg ctccacgtca ccgggacgcc
      181 gctgatggga ttgccggatg cgtccgtgac cttgacgatc agcggcgcag ccagggtatc
      241 accgacagct cctgactggc cgtcccccga aaccatggca ataccattgg catcacccga
      301 caggactatg gcggtaaatg gggcttggat cggtgccgcc ccactaggca ccggcacctg
      361 cgcctggcct tgcatctgtc cggcctgcga accgagggtg atcttggcct tggccgttcc
      421 atctgcaccg gtctgagcac tggcaggagt tacggtgccg ccgccacgat cgtcggtgag
      481 cacaaattgg acggtggcgc cgggcaccgg ccgattctgg gtgtccgtga ccagagcgac
      541 gagcgaatcg cccaattgag tgcccacccg acccgcttct ccactccccg actggatgct
      601 gatctgagcc ggttcccctt cgctgggtag cgtcagacta tccccaccac agccggcata
      661 tagcagggga agtccagcga gcatcgcaat cgagagcgtt ctagcgttca cgcgtcatac
      721 ccagcaatga gttgtagaag gcggatccac gggaagtggg agccggcatg agtctattcg
      781 catgcccctc ccaacaaaag gacgtggctc acaagtcgcc tccaacctcc tgcctcccaa
      841 tagctttgat tttgcgacgg ggaaagcggt ggaaacggtg agctagcgga tcaagcagct
      901 tatgtgcccg ggcagcgcct ggaacccggg cgctaacgca gcatgtacgc tgatgttaca
      961 ggaggatgcg cgagcggtgt agcgggcgcg ctacggcagg taaccttaga agagcacggt
     1021 ggcagtgaac gtcacggggg aaccggtggc cttgtcgatg gcggccgtga gtttgtggac
     1081 tccgcgctga ttgcccaagt cccactcgac gctggcaagc ccccgttcgt cgcttgcggt
     1141 gatcgggctg tttacctgac ccccaccgga aatgacttgc caggagaccg ggacaccggg
     1201 gatcggattg ccaaaccgat ccacgactcg gacctgaggc ggggttgaca ccggctgatt
     1261 ccggaggccg ggctgcgcca ggggactctg cgcagccagc gtgtcgggct cgccggcaat
     1321 cgcaatggct tggaactggg tgacttggtt ctcgccccct gcgacaacca gttgcgccgt
     1381 ggccgtgtaa gtgccgggca cggtgccgag agtccacatg gcaaccgcct ccccatcgct
     1441 gttggtcgtc gcagttggag gagtgaccgt accaccggcg ggatcagaca gggcgaacgc
     1501 cacttctact ccactcgcgg gctgctgggt ctgggtaacc actttgacga tgagcggggt
     1561 gccgagcact tcgccgaccg cgcctgtctg ttcgtcaccc tgcatcttgg tcagggcgac
     1621 attctcttgg ctcgccgga
//
LOCUS       DASRPQ010000316         2154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3481827, whole genome shotgun sequence.
ACCESSION   DASRPQ010000316 DASRPQ010000000
VERSION     DASRPQ010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3481827"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..216
                     /locus_tag="VFD73_03645"
     CDS             <1..216
                     /locus_tag="VFD73_03645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73112.1"
                     /translation="EFDGVKGPPFQQLYVDPETLIRHAAKEHWDCEILQPPDHYGHYL
                     VRLTPRATIDQAKPRARRGAARRPSNP"
     gene            complement(179..1927)
                     /locus_tag="VFD73_03650"
     CDS             complement(179..1927)
                     /locus_tag="VFD73_03650"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HZI73113.1"
                     /translation="MVLTSRPSQPLHILDSRRLTGPGLLLDGPGAVLDVRVDEDIRAE
                     AVAAWERFARRYLDAVGWPNEKLTTRSFTDGVSLALTAPLDGLYAATELNERAWASAL
                     AEIRGEKLPDFRAGVASLLEDAVSERNPAIVRLCREAKARRLTFLMGEDLVSVGSGTG
                     ALLWRLNEPPEPSEVDWSSAHEVPIALVTGSNGKTTVVRLLGAMLETAGKTPGLTSTD
                     GVTVGRELLEEGDFAGPSGARMVLRHPQVETAVLETARGGILRRGLPVDRANVAVVTN
                     IADDHLGEFGIETLPDLADTKLVVAKALGTAGTLVLNADDPLLVERSRTVAARLAWFS
                     LDPNSELVARQIKAGAIVALLEDEALVLWQGNNPTTLASLAEIPITYRGVATHNVANV
                     LAAAAAGLALGISPEAIGAAARRFGTGLDDNPGRANLMELGGVRILLDFAHNPHGMSA
                     LVKLARTIPAKRRLVLVGQAGDRSDEAIRALARATLELAPDHVIVKDMEEYLRGRAPG
                     EVPEILADEFFRLGLPEEALTRAERELAGVRWALEWVRPGDLLVLAVHEDRRSVVSLL
                     DRLAAMDWKAGEPLPV"
BASE COUNT          389 a          753 c          648 g          364 t
ORIGIN      
        1 gaattcgatg gagtaaaggg accgccgttc cagcagctct acgtggatcc cgagacgctg
       61 atccgccatg ccgcaaagga gcactgggat tgcgagattc tccagccgcc cgaccactac
      121 gggcactatc tggtgcgatt gacaccgcga gcaaccatcg atcaggccaa gccgagagct
      181 agacggggag cggctcgccg gccttccaat ccatagcggc gagccggtcg agcagcgaca
      241 caaccgaccg ccggtcctca tgaactgcca ggaccaggag atcgccggga cggacccact
      301 ccagcgccca gcgtaccccg gccagctccc gctcggcccg ggtgagcgcc tcctccggaa
      361 gtcccagccg gaagaactcg tcagccagaa tctcgggtac ttctcccggt gctcgtcccc
      421 ggaggtactc ctccatgtcc ttcacgatga cgtgatcggg agccagctcc aaggtggccc
      481 gggccagcgc ccggatcgcc tcgtcgcttc tatcgccggc ttgccctacg agcaccaggc
      541 gccgcttcgc cggaatcgtg cgcgccagct tcaccaacgc cgacatgcca tgcggattgt
      601 gagcaaagtc gagcaggatt cgaacgccgc cgagctccat caggttggct cggccgggat
      661 tgtcgtccaa cccggtcccg aaccgtctgg ctgccgcgcc tattgcctcc ggtgaaatgc
      721 ctagcgccag gccggctgcc gcggccgcaa ggacgttggc aacgttgtga gttgccacgc
      781 cccggtaggt gatgggaatc tcggcgaggc tcgcgagggt ggtggggttg ttcccctgcc
      841 acagcaccag cgcttcgtcc tcgagaagtg ccacgattgc gcccgccttg atctgccgtg
      901 cgaccaactc cgagttgggg tccagcgaga accaggcaag ccgggcggcg accgtccggc
      961 tgcgctcgac cagcagtggg tcatcggcat tcaggacgag ggttccagct gtccccagcg
     1021 cctttgccac taccagcttg gtgtcggcca gatcgggcag cgtctcgatc ccgaactccc
     1081 ccaggtgatc gtcagcgatg ttcgtgacca ccgcgacatt cgcgcggtcc accgggagac
     1141 cacgccggag aatgccgcct cgggccgttt ccagcacggc ggtctcgacc tggggatgcc
     1201 gcagcaccat ccgggcaccg cttggccccg cgaagtctcc ttcctccaaa agctcgcgcc
     1261 ccacggtgac tccatcggtt gacgtcaggc cgggggtttt ccctgcggtc tccagcatgg
     1321 cgccaagcag tcgtacgacc gtggtttttc cgttggaccc ggtgaccagc gcgatcggca
     1381 cctcgtgagc cgagctccag tccacctcgg acggctccgg tggctcattc agccgccaga
     1441 gcaaggcgcc ggttcccgag ccgacggaga cgagatcctc gcccatcaga aacgtcagtc
     1501 ggcgagcctt ggcttcccgg cacagccgga cgattgccgg atttctttcc gagaccgcgt
     1561 cctccagcag cgatgccaca ccagcccgga aatcgggaag cttctcaccc cggatctcag
     1621 ccagtgcgga ggcccaggct cgttcattca attcggtggc cgcatacaat ccgtccagcg
     1681 gcgccgtaag cgccagactc acgccatcgg tgaatgatcg agtcgtcagc ttttcgttgg
     1741 gccaaccgac agcgtcgaga tatcgccggg cgaacctctc ccacgccgcc accgcctccg
     1801 cgcggatatc ctcatccacc cgtacatcca gaaccgcacc gggtccatcg agcagcaacc
     1861 caggcccggt cagccggcgg gagtccagga tgtgcagtgg ctgtgacggg cgagaggtga
     1921 gtaccatagg ctgtattgac tacgctcagc gggtgtgtgg tgggtcaccg acgggataat
     1981 cgtcataagc aactctggtg tccaccctga aacagcgggt ctgccagcag gaggcttgca
     2041 ccgccgcata acccccgatg acacaaccta gcctcacggc ggactctccg tctctcgacc
     2101 cagctcagct ggaaattact cgtctacgcg cgctccgagg tcccaactat tggc
//
LOCUS       DASRPQ010000317         1020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2855251, whole genome shotgun sequence.
ACCESSION   DASRPQ010000317 DASRPQ010000000
VERSION     DASRPQ010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2855251"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(286..>1020)
                     /locus_tag="VFD73_03655"
     CDS             complement(286..>1020)
                     /locus_tag="VFD73_03655"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HZI73114.1"
                     /translation="PFHLDLAGRSLGPSFPGQARTVLEYLVSHRKRPVHRDALLDLLW
                     PDADPSIACSRLRVVMHTLRKSLPSLHPDSQDLVVMMGNVFMVNPVFELRVDVEEFER
                     HWLNGWRLSRLGKTEQALAEYEQAEALYLGDYLEDEPYADWTLLRREALRDAYTSILT
                     TLATMSLEACDYTGAIIWAQRLLAIDNYREDAYQLLMTAHQRVGQPNRAIHWYRLCAR
                     MLQQELGIDPSAETQALFSNITSSVG"
BASE COUNT          196 a          310 c          315 g          199 t
ORIGIN      
        1 tcttcttacc ggttccaaca tgctggatca gtccccagcg ccagccttgt cccggttcga
       61 cccacagccg taacacgaac gagctatagt gtgccacctc aaaaccccca aagccccaac
      121 ggggctaccc caacgtctaa cccagccgcc ggtcgtacaa agataccacc gagcagtttg
      181 ctcaacgtta actgagcgtt aggcgagcgt tagatgggta ttgggtgccg ggtgctgggt
      241 gccgagcgcg gggcgcgggg cgcggcgcgc ggggtgcctt atgctttacc ccacactgga
      301 agtgatgttg ctgaacaagg cttgcgtttc cgccgatggg tcgatgccca gctcctgttg
      361 cagcatgcgg gcgcacagtc tgtaccagtg gatagcacgg tttggctgtc ccactcgttg
      421 gtgggcggtc atcagcaact ggtaggcgtc ctcgcggtag ttgtcaatgg caaggagtct
      481 ttgtgcccag atgatcgcgc ccgtataatc gcaggcctcg agcgacatgg ttgcgagcgt
      541 ggtgagaata cttgtatagg catcgcgcag cgcctctctg cgcaataacg tccagtcggc
      601 gtagggttcg tcttccaggt agtctcccag gtacaaagcc tcggcctgct catactcggc
      661 caatgcctgc tcggtcttcc ccaacctgga caaccgccag ccgttgagcc agtgccgctc
      721 gaactcctca acgtccaccc gcaattcgaa cacggggttt accataaaaa cgttgcccat
      781 cataaccacc aggtcctggg agtcggggtg cagggaaggc aggctcttgc gcagggtatg
      841 catcaccaca cggaggcggc tgcacgctat cgaagggtcg gcgtccggcc acagcaggtc
      901 gagcaaggcg tctctgtgca cgggccgctt ccggtggctg accaggtatt cgagcacggt
      961 tctagcctgg cccgggaagc tcgggccaag agagcggccc gccaggtcga ggtggaaggg
//
LOCUS       DASRPQ010000318         6651 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_350716, whole genome shotgun sequence.
ACCESSION   DASRPQ010000318 DASRPQ010000000
VERSION     DASRPQ010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6651
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_350716"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..904
                     /locus_tag="VFD73_03660"
     CDS             <1..904
                     /locus_tag="VFD73_03660"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HZI73115.1"
                     /translation="EERDERESIATIHRSLELGCTFLDTAEVYGPFTNEELVGRALKG
                     RRERAVIATKFGWKIENGKMVGLDSRPSHIREAVEGSLRRLGTDYIDLLYQHRVDPAV
                     PIEDVVGAMGQLVDEGKVRYLGLSEAGEATIRRAHAVHPISALQSEYSLWERNLEPRI
                     IPLLRELEIGLVPFSPLGRGFLTGTVKRAEEYPEEDYRRGDPRYQGENFDANMRAASA
                     VQELARRKSATPGQIALAWLLHKGDDVVPIPGTKRRKYLEENIASVAVELSPQEMAEL
                     DRALPPEKVAGPRYNDRMMATVDR"
     gene            914..1909
                     /locus_tag="VFD73_03665"
     CDS             914..1909
                     /locus_tag="VFD73_03665"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HZI73116.1"
                     /translation="MVPLSVLDLAPIPEGSDAAEALRRSLDLAQHAERWGYQRFWLAE
                     HHSMPGIASAATAVVIAHVAGGTSSIRVGAGGIMLPNHAPLVIAEQFGTLASLFPGRI
                     DLGLGRAPGSDQLTIRALRRYHSAADSFPNDVAELMYYFRPVEPGQAVQAVPGAGLEV
                     PIWILGSSLYGAQLAAAMGLPFAFASHFAPAMMTEAIQLYRTGFRPSDQLKRSYLMLG
                     VNVVAAETDEEARFLFTSLQQAFINLRLGRPGRLPPPVSGFGDRLDPVARSILDQALG
                     RAIVGSPDTVRRGLRAFAAETGADELMITSQIFDHDARLRSFEIVANSHQLTAVS"
     gene            complement(1906..2163)
                     /locus_tag="VFD73_03670"
     CDS             complement(1906..2163)
                     /locus_tag="VFD73_03670"
                     /inference="COORDINATES: protein motif:HMM:NF016811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YHS domain-containing protein"
                     /protein_id="HZI73117.1"
                     /translation="MNRVKDPVCGMMIDPSTAAGSTTFEDQEIYFCSEECRKEFEADP
                     GRYYDRIERQEPAYTVKDGIAAPKFGSAASGGLEDEPAPRR"
     gene            complement(2287..2502)
                     /locus_tag="VFD73_03675"
     CDS             complement(2287..2502)
                     /locus_tag="VFD73_03675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002439184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HZI73118.1"
                     /translation="MARTTGTVKWFNDSKGFGFITPENGQKDCFVHHSAIQGQGFKSL
                     AEGDRVEFDVVQGQKGPAAENVVKIAK"
     gene            complement(2728..3585)
                     /locus_tag="VFD73_03680"
     CDS             complement(2728..3585)
                     /locus_tag="VFD73_03680"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI73119.1"
                     /translation="MAAPLDSAVVQDIQVGNGEMLRTTSMGSGQPIVLVPGIFGGAFG
                     YRKITGSLASAGYRIIVVEPLGYGSSSHPKNADYSFEAQTGRVAKTLDQMGVKGALVV
                     AQSSGAAIAFRLAIQRPDLVRGLLSIDGGPAESAATPGMKKAFKFGGGLVKFAMDESK
                     LRHDVRREIIRNSGDTTWVTDAVVRGYTAGPAADLDGSIDAFHQMAKSKETVSLADRL
                     DQCTAPVVLLLGTVEHPAEVTDDQQQLLQQKLRHFSAERISGAGQYIQEEQPGAVLAA
                     VARLEKESR"
     gene            3812..4141
                     /locus_tag="VFD73_03685"
     CDS             3812..4141
                     /locus_tag="VFD73_03685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73120.1"
                     /translation="MTDRSPDRISTPAETSQSLTDLVAERVMQARLDVEARSRKRSSP
                     AEVRETQSLNRVFREMGYAYRRYRSQTRKPVVPGLRDAAYAFRANPSLPALVAVAGYL
                     EKLDLLS"
     gene            4213..4458
                     /locus_tag="VFD73_03690"
     CDS             4213..4458
                     /locus_tag="VFD73_03690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73121.1"
                     /translation="MRTRQARIRQPYEAWFPTIEPGIWHNAAWMAERVLQQQRRGSPT
                     WALDGRVLQDKHIEFRGYGPLRRKFPLSRRSDLPTHQ"
     gene            4455..5846
                     /locus_tag="VFD73_03695"
     CDS             4455..5846
                     /locus_tag="VFD73_03695"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HZI73122.1"
                     /translation="MIGISSGRRIPSASALLCAGLLTCAVSASAQTSHLRVPYSTDTL
                     PNGLILVVHEDHSTPIVTVSTLRRVGSADEKPGRTGFAHLYEHLMFMGSEHAPYPMFD
                     RLLEAAGANNNAYTTEDRTVYYEWGPATALPLMLWLEADRTGWFLPTMDSVKVDLQRD
                     VVKNERRQSYENQPYGLANETILRMLYPPQHPYHWPVIGSMADLTAASLEDVKDFFRR
                     YYAPDNTTMVVAGDVKSDSVRRLVHGWFERIPRGPSISRPTLPGFSLQHDTTATLEDR
                     VQLPRLYYTWHTVRRGQQDDAPLRILAYILTGAKNGRLTQPMVYERQIASDVSAIPDH
                     KRLDGNFTIQATARPGKALPELQVFVDSELTRLAQTGPTERELQQAKNATEASFLSRL
                     ETVSGKAEQMNQYLYYTGEADYFQKDLDRYLAVTAGDVQRVARQYLQRPKVILSVVPE
                     GKRNLAAERRMQP"
     gene            5843..>6651
                     /locus_tag="VFD73_03700"
     CDS             5843..>6651
                     /locus_tag="VFD73_03700"
                     /inference="COORDINATES: protein motif:HMM:NF012879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HZI73123.1"
                     /translation="MRWAIALLGLAGVFSSSLAAQQLDITHPPRLGPPDPLKIPPVQR
                     TSLANGLQLYVIEQHEVSVVQLLLSVRGGGRNDGTEPGLASFTGNMLDEGADTLDAFG
                     IAAREAYLGADLETGADWDATEIGLKVPAKTLSPALDLMATVALKPSFRSDVVKRQRD
                     LRLAAILQQRDEPDVVAGKTFDALVFPAGHPYHEPLIGDSASTVSLDSTMVREFYRRT
                     FRPDRATMIVSGDITLLEARTMVEREFGAWRPTKAADYLSSRISPPVPRGGT"
BASE COUNT         1252 a         2099 c         2038 g         1262 t
ORIGIN      
        1 ggaggagcgg gacgagcggg agtcgattgc caccattcat cggtcattgg agctcgggtg
       61 cacctttctc gataccgcgg aggtctatgg gcccttcacc aatgaagagc tggtcggccg
      121 ggcactgaag ggaagacgcg agcgggcagt catcgcgacc aagttcggct ggaagatcga
      181 gaacggaaag atggttggcc tcgacagtcg gccctctcat atacgcgagg cggtagaggg
      241 gtcgctgcgg cgtttaggta ccgactacat cgacttgctc tatcaacacc gggtagaccc
      301 cgcggtgccc atcgaggacg tcgtcggcgc catgggccaa ctggtagatg aaggaaaggt
      361 gcggtatctg ggtctttccg aggccggcga ggccaccatt cgaagggcgc acgcggtgca
      421 tcccatctcc gctctccaga gtgagtattc gctctgggag cggaacctgg aaccccggat
      481 cattccgctc ctgcgggagc tggagattgg actggtcccc ttcagcccat taggccgcgg
      541 gtttctcacg ggcaccgtca agcgcgccga ggagtatccg gaggaggatt accgcagagg
      601 agatcctcgg taccagggag agaacttcga tgccaatatg cgggccgcct cagcagtgca
      661 ggagctggcc cggaggaagt cggcgacacc cggtcagatt gcgctcgcct ggctcctgca
      721 caagggcgac gacgttgtgc cgatccccgg caccaagcga cgcaaatacc tggaggagaa
      781 catcgcgtct gttgcagtcg agctcagccc gcaggagatg gcggagctgg atcgggctct
      841 tccaccggag aaggtggccg gcccgagata caacgatcgt atgatggcaa cggtggaccg
      901 atagcactct tcgatggttc cactttcggt acttgacctc gcgccgattc cggaggggag
      961 cgatgccgct gaggcgctgc gccgctcgct ggacctggcg cagcacgccg agcgctgggg
     1021 ctatcagcgg ttctggctgg cggagcatca cagcatgccg gggatcgcga gtgcagcaac
     1081 ggcggtcgtg atcgcccatg ttgccggcgg gacctcgagc atccgggttg gcgctggcgg
     1141 gatcatgctg ccgaaccacg caccgctggt gatcgcggaa cagttcggga cgctggcctc
     1201 gctctttccc gggaggatcg atctgggact cgggcgggcc cccggctcgg accagctgac
     1261 aatccgcgcc ttacggcgat accactcagc ggcagacagc tttccgaatg atgtcgcgga
     1321 gttgatgtac tacttccgtc cggtcgagcc gggccaggcg gtccaggcag tgcccggagc
     1381 agggctcgag gtgccgatct ggatcctggg ctccagcctc tatggcgcgc agctcgccgc
     1441 ggcgatggga ttgccctttg cctttgcctc ccatttcgcg ccggccatga tgacggaggc
     1501 catccagctc taccgcaccg gctttcgtcc atccgaccag ctgaaacgtt cttacttgat
     1561 gctgggagtc aacgtggtag ccgcggagac cgatgaggag gcgagatttc tcttcacttc
     1621 gctgcagcag gcgttcatca acctgaggtt aggccggccg gggcggctgc cacctccagt
     1681 ttctggattc ggagatcggc tcgatccagt ggctcggtcg atactcgatc aggccctcgg
     1741 ccgggcgatc gtgggatcgc ccgacacggt acgacgggga ctccgggcgt ttgccgccga
     1801 gactggagca gacgagctga tgatcacctc ccagatcttc gatcacgacg cgcgattgcg
     1861 gtcgttcgag attgttgcca acagccacca gctgacggct gtgagctagc gcctcggagc
     1921 cggctcatcc tccaggccgc cactcgcggc agagccgaac ttcggcgcgg caatcccgtc
     1981 tttgaccgta tacgccggct cctgtcgctc gatccggtcg tagtagcgcc cgggatcggc
     2041 ctcgaactcc ttccggcact cctctgagca gaagtagatc tcttgatctt cgaaggtggt
     2101 gctgcccgcg gcggtgctgg gatcgatcat catgccgcag actggatctt ttactcggtt
     2161 catacgaact cctggtgaat ccgattccta ttcttcgcgg ggcaccttga ccgaactgtg
     2221 aggtgggtca cacgaaaaac ggccggtccc tgaggggccg gccgcctgtc tgattcggtg
     2281 aagccgttac ttggcgatct tcacgacgtt ctcggccgcg gggcctttct gaccctgcac
     2341 gacatcgaac tcgacgcggt caccctcggc gaggctcttg aagccctgac cctggatggc
     2401 cgaatgatgc acgaagcagt ccttctgacc gttctccggc gtaatgaagc caaagccctt
     2461 cgagtcattg aaccacttga ccgtgcccgt agtgcgtgcc atttcccact ccttgatact
     2521 gatgtaatcg gagtggggac atgccacacg accgactacg ttttgcgcgt ggacgtcgcc
     2581 cccacgccgg ccggcggtcg cggcgctaca tgcgccagga acaaccacca agcaaacggg
     2641 gaccggcctc agcgccaggt ccccggtgtt cgcttggtac ggaaagtaga agcggtgaac
     2701 ggcaaaaaca agtgatcgaa ggccctgcta cctggactcc ttctccagcc gcgctactgc
     2761 cgctagaacc gctcccggct gctcctcctg aatgtattgg cccgctcccg aaatcctctc
     2821 ggcactgaag tggcgcagct tctgttgcag gagctgctgc tgatcatcag taacctctgc
     2881 tgggtgctcc acggtaccaa gcagaagcac taccggagca gtgcactgat cgagccggtc
     2941 tgccaaggag accgtctcct tggatttcgc catctgatga aacgcgtcaa ttgatccatc
     3001 gaggtcagca gctggcccgg cagtgtatcc ccggaccacc gcgtcggtca cccaggtggt
     3061 gtcaccggaa ttgcggatga tctctcttcg cacatcgtgc cgaagcttcg attcatccat
     3121 ggcgaacttg acgagtccac cgccgaattt gaaggctttt ttcatgcccg gagtcgcagc
     3181 gctctcggct gggccgccat cgatcgagag gagaccgcgt accagatcgg ggcgctgaat
     3241 ggcaagccgg aacgcgatgg cagcgccgct ggactgcgcc accaccagcg cgcccttcac
     3301 gcccatttgg tccagtgttt tggccactct tccggtttgg gcttcgaagg aataatccgc
     3361 gttcttggga tgggaggaag aaccgtagcc gagtggctca acgacgatga tgcgataccc
     3421 ggcgctcgcg agagacccgg taatcttccg ataaccaaat gcaccgccaa agatgccggg
     3481 caccagcaca atgggctgcc cactgcccat gctcgtggtg cgaagcatct ctccgttgcc
     3541 cacctggata tcctggacca cggcactatc aagtggggca gccatcagca gtatgctgag
     3601 caggtacata gcaactcacg tttccaagag aggactacgg catgacttgc accgccgtgc
     3661 caggaatgtg cgaatacaat ctaccgcatc tgctgcactt ggccggtgat tgatggccca
     3721 attcgctaaa tgcactttcc ccggctattt ttcctgagcc ctcagctcct cgtctgcagc
     3781 gctgaggctc cccacaacca gtaggatccc catgaccgac cgttcgccgg acaggatttc
     3841 gactcctgcg gaaacatctc agtcacttac agacctggta gccgagcggg tgatgcaggc
     3901 ccgactcgac gttgaagccc ggagcaggaa gcgctcgtct cccgcagaag tccgcgagac
     3961 ccagtcactg aatcgggtat ttcgggagat gggctacgcg tatcgacgct atcgcagcca
     4021 gacccgcaaa ccggtggttc caggcctccg cgatgcagcc tacgcatttc gggcaaaccc
     4081 cagtctcccg gccctggtcg cggtcgcggg atatctggag aagctcgatc tgctgagttg
     4141 aaccaaacgt gatccagctc gtggtcggcc gatagcgcaa ccactatcct tccaggtcaa
     4201 cgggaggatc acgtgagaac tcgacaagct cgtatccgac aaccgtacga agcgtggttc
     4261 ccgaccatcg agcccggcat ctggcacaat gcagcatgga tggccgagcg ggtgctccag
     4321 caacagcggc gcggctctcc tacctgggca ctggatggcc gcgttctgca ggacaagcac
     4381 atcgagttcc ggggatatgg ccctctccgc cgaaagtttc cgctttcccg ccgaagcgac
     4441 cttccgaccc atcagtgatt ggcatctctt caggccggcg catccccagc gcttcggcgc
     4501 tgctgtgcgc tggtctcctc acctgtgcgg tgtcagcctc ggcccagacc agtcatctca
     4561 gagttcctta cagcacggat actctgccga atggactcat cctcgtcgtg cacgaggatc
     4621 actccactcc catcgtaact gtcagcaccc ttcgtcgggt cggctccgcc gatgagaagc
     4681 ccggacggac cggcttcgcg catctgtacg agcatctgat gttcatggga tcggagcacg
     4741 ctccgtatcc catgttcgac cggctgctgg aggctgcggg cgcaaacaac aacgcgtata
     4801 ccaccgagga ccgcactgtc tattacgagt gggggccggc cactgctctt cccttgatgc
     4861 tctggctgga ggccgaccgg accggatggt tccttccgac gatggactcg gtaaaggtgg
     4921 atctgcagcg ggacgtggtg aagaacgaga ggcggcagag ctacgagaac cagccgtacg
     4981 ggttggcgaa tgagacgatc ctccgcatgc tctatccccc gcagcatccc tatcattggc
     5041 cggtgatcgg gtcgatggcc gacctgaccg cggcttccct ggaggacgtc aaagatttct
     5101 ttcgacgcta ctatgctccc gacaacacga ccatggtggt tgctggggac gtgaagtcgg
     5161 attcagtgcg gcggctggtg cacggctggt tcgaaaggat tccgcgcggg ccctcgatct
     5221 cccgtccgac gctacccggc ttctcacttc agcacgacac taccgcgacc ctggaagacc
     5281 gcgtccagct tccccggctg tattacacgt ggcacacggt ccggcgggga cagcaggatg
     5341 acgctccgct tcgaatcctg gcctacatcc tgaccggcgc aaagaacggg cgactcaccc
     5401 agccgatggt ctacgagcga cagatcgcga gcgatgtgag tgcgattccc gatcacaagc
     5461 gcctcgatgg aaatttcacc attcaggcca ctgctcggcc gggaaaggcg ttgcccgagc
     5521 tccaggtttt tgtcgatagc gagctcaccc ggctggcgca gaccgggcct accgagcggg
     5581 agctgcagca ggccaagaat gcaaccgagg cgagctttct ctcacgcctg gagacggtga
     5641 gtggcaaggc cgagcagatg aatcagtatc tctactacac cggggaggca gactacttcc
     5701 agaaggacct cgatcgctat ctcgcggtga ccgctggcga tgtccagcgg gtggcccggc
     5761 aatatctcca gcggcccaag gtcattctga gcgtggttcc tgaaggaaag cgaaatctcg
     5821 cggcggagcg gaggatgcag ccgtgagatg ggccatcgcc ttgctcggcc tcgccggagt
     5881 gttcagcagt tcgcttgcgg cccagcaact cgacatcacc catccccccc gactcgggcc
     5941 tcccgatccg ctcaagattc cgccggtcca gcgaacttcg ctggcgaacg gactccagct
     6001 ctatgtcatc gagcagcatg aggtatcggt ggtgcagctg ctgctctcgg tgcgcggcgg
     6061 aggccggaat gatggcaccg agccgggact cgcctcgttt accggcaaca tgctggacga
     6121 gggcgccgat acgctggacg cgttcgggat cgcggcacgg gaagcgtatc taggagcgga
     6181 cctcgagacc ggtgcagact gggatgctac ggagatcggc ctcaaggttc cggccaagac
     6241 actgagcccc gcactggacc tcatggccac agtggcgctc aagcccagct ttcgatccga
     6301 tgtggtcaaa cggcaacgcg atctgcgtct ggccgccatc ctccagcagc gggatgagcc
     6361 cgacgtggtg gccggcaaga cgttcgacgc gctggttttt cctgcgggcc acccgtatca
     6421 cgaacctctg atcggcgatt ccgcatccac cgtcagtctc gattcgacaa tggtgcgcga
     6481 gttctatcgc cggacctttc ggcccgaccg ggccacgatg atcgtctccg gtgacatcac
     6541 cttgctcgag gctcgcacga tggtcgagcg ggagttcgga gcctggcggc ccaccaaggc
     6601 ggcggactat ctctcttccc ggatcagccc tcccgtgccc cgcggcggca c
//
LOCUS       DASRPQ010000319         3615 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2227746, whole genome shotgun sequence.
ACCESSION   DASRPQ010000319 DASRPQ010000000
VERSION     DASRPQ010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3615
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2227746"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..558
                     /locus_tag="VFD73_03705"
     CDS             <1..558
                     /locus_tag="VFD73_03705"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HZI73124.1"
                     /translation="IIVVHRSDGSGTTFIFTDYLSKISGQWKGQVGKATSVQWPVGLG
                     GKGNEGVTQLVKQTEGAIGYVELIYAISNNLPYAWLKNAGGAFIEPTLKSVSAAAAGA
                     HLAPETDFRVSITNAAGVESYPISSFTWLLVQRQPRDSVKARLLHNFLAWMLEPEAQR
                     MAADLHYSPLPVSLIETVHRRIQTP"
     gene            629..1612
                     /gene="pstC"
                     /locus_tag="VFD73_03710"
     CDS             629..1612
                     /gene="pstC"
                     /locus_tag="VFD73_03710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HZI73125.1"
                     /translation="MTALEAPPRISSAQPVPLERANYGDRAFKLVLTAAAVVIPVLLG
                     FLIYQLWSGAAPAISRYGLSFITTSTWDPVAEEFGAFPLIFGTLVSSLIALLIAVPLS
                     LGVAVYLTEFAPKAVRQPVAFLIGLLAAIPSVVYGLWGIFVLVPALRTTAFPLLRKAL
                     GFLPFFQGPIYGPSMLAAGIILAIMVMPYVMSVAREVLLAVPNTQREAALALGATRWE
                     AVITAVVPYARSGLIGAIILGLGRALGETMAVTMVIGNRHEVAASLFAPGYTMAAAIA
                     NEFSEAVGDLHLSALAYVAFTLFVVTVVVNAGARLLIWRVARGSAAGSRAL"
     gene            1609..2472
                     /gene="pstA"
                     /locus_tag="VFD73_03715"
     CDS             1609..2472
                     /gene="pstA"
                     /locus_tag="VFD73_03715"
                     /inference="COORDINATES: protein motif:HMM:TIGR00974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HZI73126.1"
                     /translation="MTSTFRLDRRVLRRALSNLMVGLMIGAVIVALIPLFFILLNLLL
                     KGAGSLSLAFFTRTPAPAGETGGGVAHALVGTLLIVGMASAIGLPIGIGAGVYCAEYP
                     GSRLTWITRFVADVMNGTPSIVIGVFAWAWIVARQKHFSALAGSVALALLMIPMVLRT
                     TEEMIKLVPNSLREAALALGYPRWRTSLSVVIRTTLPGITTGALLAIARIAGETAPLL
                     FTALGSQYLSFNVNQPMAALPLTVFNYATGPYEEWHRYAWAAALVLILVVFLLSLGAR
                     LAIHRRSALGG"
     gene            2465..3277
                     /gene="pstB"
                     /locus_tag="VFD73_03720"
     CDS             2465..3277
                     /gene="pstB"
                     /locus_tag="VFD73_03720"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HZI73127.1"
                     /translation="MAELMLSRVPERTSPAAQAADRVVTEKLTAMYGKFAAVKSVSLG
                     FSPNRVHALIGPSGCGKSTFLRCLNRMHELTEGGWITGRVLLDGENIYAPKVNAMQLR
                     RRVGMVFQRPTPFPTMSIYENVAAGLKVERRIPKRELDGIVEQALQGAALWDEVKDRL
                     KGSAMALSGGQQQRLCLARTIAPRPEVILLDEPTASLDPQGTQRIEELLFELKRDFTI
                     IIVTHNMQQAARVSDTTTFFYLGTMVETGPSRQIFTAPRNEQTEAYITGRFG"
     gene            3361..>3615
                     /locus_tag="VFD73_03725"
     CDS             3361..>3615
                     /locus_tag="VFD73_03725"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI73128.1"
                     /translation="MQHGGRLAVPPPRCPAIVIHDFSFFYGQRQALRDLNFSIERRAV
                     TAIIGPSGCGKSTFLRSINRLNDLIPGVRHRGDILVEGTSV"
BASE COUNT          578 a         1163 c         1161 g          713 t
ORIGIN      
        1 atcatcgtgg tccaccgttc cgacgggtcc ggcacgacat tcattttcac cgactacctc
       61 tccaagatct caggccaatg gaagggccag gtgggcaagg cgacgtcggt ccaatggccg
      121 gtggggttgg gaggcaaagg gaatgagggc gtcactcaat tggtgaagca gaccgagggt
      181 gctatcggat acgtcgagct gatctacgcc atctctaaca atcttccgta cgcttggctc
      241 aagaacgccg gtggcgcgtt tatcgagcca acgctcaaga gcgtttctgc agcggcggcg
      301 ggcgctcacc ttgcccctga gaccgatttc cgcgtgtcga tcaccaatgc tgccggggtc
      361 gaatcgtatc cgatctcctc ctttacctgg ctgctggttc agcgacagcc gagggacagc
      421 gtgaaggcgc ggctgctgca caatttcctg gcctggatgt tggagcccga agcgcagcgc
      481 atggctgccg atctccacta cagcccctta ccggtgtcac tgatcgagac ggtacaccgc
      541 cgcatccaga ctccctagct gcccggtcgt gacgtatccg ttacgtcacc gtgactatcc
      601 gcctaagccc gttctctaca atcagagcat gaccgccctc gaagcgcccc cgcgcattag
      661 ctcggcgcag cccgtcccgc tggaacgggc gaactacggc gaccgcgcgt tcaaactggt
      721 cttgacggcc gcggcggtcg tgatcccggt actgctcggg ttcctgattt accagctctg
      781 gtccggcgcg gcacccgcaa tcagccgcta cgggctgagc ttcatcacaa ccagcacctg
      841 ggatccagtg gcggaggagt tcggcgcctt tccactgatc ttcggaaccc tggtctcctc
      901 gctgattgcc ctgctcatcg ccgtcccact ttcgctcggg gtggcggtct atctgaccga
      961 atttgctccc aaggcggtcc gccagccggt tgcgtttctc atcggcctgc tcgccgcgat
     1021 cccgagtgtg gtctacggac tctggggcat cttcgtgctg gtgcccgcgc tccgcaccac
     1081 cgccttccct ttgctgcgaa aagcgctcgg gtttctcccc ttctttcagg gtcccattta
     1141 cgggccgtcg atgctggcgg cgggaatcat cctcgccatc atggtcatgc cgtatgtgat
     1201 gtcggtggcg cgggaggtcc tgctcgccgt acccaatacc cagcgtgagg cggcgctggc
     1261 gctcggggca actcgatggg aggcggtgat caccgcggtg gttccctatg ccaggtccgg
     1321 actgatcggc gcaatcatcc tggggctggg gcgcgccctg ggcgagacga tggcggtgac
     1381 gatggtgatc gggaaccgcc acgaggtggc ggcgtcgttg ttcgcccctg gctataccat
     1441 ggcggcggcg atcgccaacg agttttccga ggcggtcggt gacctgcacc tctcggcgtt
     1501 ggcctacgtt gccttcaccc tgttcgtggt caccgtggtg gtgaacgccg gcgcgcggct
     1561 tctgatctgg cgggttgccc gcggatcggc cgcggggagc cgggccctgt gacctcgact
     1621 ttccggctgg accggcgtgt gctccggcgg gctttgagca acctcatggt cggcctgatg
     1681 atcggggcgg tgatcgtggc gctgatcccg ctgttcttca ttctgctgaa cctgctgctg
     1741 aagggcgccg gcagtctgtc gctggcattc ttcacccgga cgccggcccc ggctggagag
     1801 accggtggag gagtggccca cgccctggtc ggtactctgc tcatcgttgg catggcgagc
     1861 gccatcgggc tcccgatcgg cattggggca ggcgtctact gtgccgagta cccggggagc
     1921 agactcacct ggatcacgcg tttcgtggcc gatgtcatga acggcacccc atcgatcgtg
     1981 atcggtgtgt ttgcctgggc ctggatcgtc gcgcgacaaa agcacttttc cgcgctggcc
     2041 ggaagcgtgg cgctggctct cctcatgatc ccgatggtgc tgcgcaccac ggaggagatg
     2101 atcaagctgg tgcccaactc gctccgggag gccgcccttg cgctggggta cccccgctgg
     2161 cgaaccagtc tgtcggtggt gatccgaacc actctgcccg gcataaccac cggagccttg
     2221 ctcgccattg cccgaattgc cggggagacc gcgccgctcc tctttaccgc gctcggcagc
     2281 cagtacctca gcttcaatgt caatcagccg atggcggcgc tgccgctgac cgtgttcaac
     2341 tatgccaccg gtccctacga ggaatggcac cgctatgcct gggccgcggc gctggtcctc
     2401 attctcgtgg tgttcctgct gagcctgggg gcccggctcg cgatccaccg gaggtctgcc
     2461 ctcggtggct gagttgatgc tgagccgcgt accggagcgg accagtcccg ccgcccaggc
     2521 ggccgaccgg gtcgtcaccg agaagctcac ggcgatgtac gggaagttcg ccgcggtaaa
     2581 aagcgtgtcg ctcggatttt cgcccaaccg ggtgcacgcg ttgatcggtc cgtcgggctg
     2641 tggcaagtcc acctttctcc gctgcctcaa ccggatgcac gagctgaccg aaggcgggtg
     2701 gatcaccggc cgggtattgc tcgacggcga gaacatctac gcgcccaagg tcaacgcgat
     2761 gcagttgcgc cgccgtgtcg gaatggtctt tcagcggccg actccattcc ccacgatgtc
     2821 gatctacgag aatgtggcag ccgggctcaa ggtcgagcgc cggatcccca agcgggagct
     2881 ggacggcatc gtagagcagg cgctccaggg agcggcactg tgggatgagg tgaaagaccg
     2941 gttgaaggga agcgccatgg ctctctccgg cggtcagcag cagcggctct gcctggcccg
     3001 aaccattgcg ccgaggccgg aggtgattct tctggatgag cccaccgcct cgctcgaccc
     3061 gcagggaacc cagcggatcg aggagctgct gttcgagctc aagcgcgact ttaccatcat
     3121 catcgtgacc cacaacatgc agcaggccgc ccgggtctcg gacaccacca ccttctttta
     3181 tctggggacg atggtggaga ccggtccctc gcgccagatt tttaccgcgc ctcggaatga
     3241 acagactgag gcgtacatca cgggaagatt cggatgatgg gcagcggggc agcggggcgg
     3301 cgggacagcg gggcagtgac tctgtctgag cgcagagtac ccttcgagct tagaaggtcg
     3361 gtgcagcacg gcggccggct tgctgtcccg ccgccccgct gccccgccat cgtgatacac
     3421 gacttcagct tcttttatgg gcagcgacaa gcgctgagag acctgaactt ctcgatcgag
     3481 cgcagggccg tcacggcgat catcggacca tccggctgcg gcaagtcgac gtttcttcgc
     3541 tcgatcaacc ggctgaacga tctgatccct ggcgtccggc accggggcga tatcctggtc
     3601 gaaggaacct cggta
//
LOCUS       DASRPQ010000320         3312 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3481898, whole genome shotgun sequence.
ACCESSION   DASRPQ010000320 DASRPQ010000000
VERSION     DASRPQ010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3312
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3481898"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..439
                     /locus_tag="VFD73_03730"
     CDS             <1..439
                     /locus_tag="VFD73_03730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73129.1"
                     /translation="PAVSLPLGFTKCTPQPFASDTARIGPSGGTLRAGRHMLKIPAGA
                     LKRSVQITMAAPSDSLNYVEFGPEGLTFDPANLPTLSMSYRNCSLTQPAEQNLEIVYT
                     NDSLTTVLDTTETVSSDTLNHVLGAQLRHFSKYVLKSRYAVAY"
     gene            447..1529
                     /locus_tag="VFD73_03735"
     CDS             447..1529
                     /locus_tag="VFD73_03735"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI73130.1"
                     /translation="MTATNNHAEGALLVRSARQLLDEGRRHEMAGQSSLAVECYAAVI
                     DYNASDKDQRAHAEALRRLAVLHHLRAESGIAADLCRRSHEVATLAGEPDLAADASNA
                     LAGFALEHGDLTGATELYSSALQLADGNPALVGKIEQNLGIVANIRGDWAKALEHYER
                     SLEAYKSICDTRGCAIAHHNLGMIHTKRKNWPEADRNYRRCHGLAEAVGDRHLSGLAA
                     LNRAEVRLAIEDYEGAKAGAEQALRIFNEVEARRDKAGAHRLLGMVFRQRGQMALAES
                     HLRSALEIAAGAQCPLTEADAARELARLYHLQLRRDAAVNLLERARAVYQRLEAAADL
                     KDVEEQIASVRSSALNESPETRGLHA"
     gene            1522..2172
                     /locus_tag="VFD73_03740"
     CDS             1522..2172
                     /locus_tag="VFD73_03740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73131.1"
                     /translation="MRNLILAVVVGLAVGCSDSTSPTTPSEVTPSFQVVDKAQHEQLK
                     QQLEAAKQRMKQERDEGKLALEVARAEWKAYRKQFKDAKKTGGMLIDLLRCEPRPLEG
                     DAEIIGPEGGTLHIGEHELLIPRGALSEEKLIVAEARTSSLVDVQFEPEGLQFQVPAT
                     LTLSYKNCDVPAGVDLMVAYLSVGNQIAELPPSEDYRSYSEVIGEIRHFSRYAVAY"
     gene            complement(2281..>3312)
                     /locus_tag="VFD73_03745"
     CDS             complement(2281..>3312)
                     /locus_tag="VFD73_03745"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HZI73132.1"
                     /translation="QFDAFRVTADVARELDFWGRIRRGLQAARADLASQEATQRAVLL
                     SLVSDVATSYLSLLELDQERSLAERTLASRQATLNLARRRFQQGLTSELDVRQFEAQV
                     AVPAATLAQTERFRAEQEHQLSLLLGQAPTAIGRRGSLVGIVEALRVPDSLPAALLER
                     RPDVQAAERAYAAATARIGVAQAARLPTISITASYGSQAPRAGDLFGSNSEIYQALAG
                     VSLPLFTGGRLINQTRAARARADQARLQYEQSVLIALREASDALAGVRTSRDQVVAQQ
                     TQAEALRRALQLAELRYRTGIASYIEVLEAQRSLFDAELALSQAQLGQLSAAVQLYRA
                     LGGNWPTGR"
BASE COUNT          594 a         1070 c         1117 g          531 t
ORIGIN      
        1 tcccgcggta tctctgcccc ttgggtttac caaatgcacc ccccagccct tcgcttccga
       61 tacggcgcgg atcgggccca gcggcggcac gcttagggct ggacggcaca tgctgaagat
      121 tccggcgggc gcgctcaagc gctcggtgca gatcaccatg gcggccccgt cggacagcct
      181 gaactatgtc gagttcggtc ctgaggggct gaccttcgat ccggcaaatc tgccaacact
      241 gtcgatgagc taccggaact gctcgttgac ccagccggcc gagcagaatc tcgagatcgt
      301 gtataccaac gactcgctga ccacagtgct ggatacgacg gagaccgttt cctccgacac
      361 gctgaatcac gtgcttggtg cccagttgcg gcatttctcc aaatacgtgc tcaagtcccg
      421 ctacgccgtt gcgtattgag ggggacatga cagccaccaa caatcacgcg gaaggcgcac
      481 tcctggtgcg ctccgcccgg cagctgttgg atgagggacg ccgccacgag atggcgggtc
      541 agtcgagcct cgcggtggag tgctacgcgg cggtcatcga ctacaacgcc agtgacaaag
      601 atcagcgcgc tcatgccgag gcgctgcgtc gcctggccgt gttgcaccac ctccgcgcgg
      661 agtccggtat agctgccgat ctctgccggc gcagtcacga agtggccacg ctggcaggtg
      721 agcccgatct ggcggcggat gcgagcaatg cgctggccgg gtttgccctg gagcacgggg
      781 acctcaccgg cgcaactgag ctctacagct ccgcgctcca gctggcagac gggaatccgg
      841 ctctggtcgg caagatcgag cagaacctcg gtatcgtggc gaacattcgg ggggattggg
      901 cgaaggcgct ggagcactac gagcgttcac tggaggcgta caaatcgatc tgcgataccc
      961 ggggctgcgc catcgcgcat cacaacctcg gaatgatcca caccaagcgg aagaactggc
     1021 cggaggcaga ccggaactac cgccgctgtc acgggctggc ggaggcggtt ggcgaccggc
     1081 acctgagcgg gctggccgcg ctgaaccgag ccgaggtgcg gctcgctatc gaggactatg
     1141 agggagcgaa ggcgggagcg gaacaggcgc tcaggatctt caatgaagtc gaggcgcggc
     1201 gcgacaaggc cggggcccac cgcctgctgg ggatggtgtt tcggcagcgg gggcagatgg
     1261 cgttggccga atcgcacctt cgctcagcgc tggagatcgc cgctggagcg cagtgccctc
     1321 tcaccgaggc cgatgccgcg agggagctgg cccgtctcta tcacctgcag cttcggcgcg
     1381 atgccgcggt gaacctgctg gagcgagccc gggcggtgta ccagcggctg gaagccgccg
     1441 cggacttgaa ggacgtggaa gagcagatcg catccgtcag atccagtgcc ctgaacgaat
     1501 cacctgaaac tcgaggtctg catgcgtaac ctcatcctgg cagtggtcgt tggcctggcc
     1561 gtcggttgca gcgacagcac ctcgcccacg acgccatcgg aggtgacgcc aagcttccag
     1621 gtggtggaca aggcgcagca tgagcagctg aagcagcagc tcgaggcggc aaagcagcgg
     1681 atgaagcagg agcgggatga gggcaagctc gcgcttgaag ttgcgcgggc ggagtggaag
     1741 gcgtatcgga agcagttcaa ggacgcgaaa aagaccggcg ggatgctgat cgatctgctt
     1801 cgctgcgagc cccggccgct ggagggcgac gccgagatta tcgggccgga aggcggcacg
     1861 ctccacatcg gtgagcacga gctgctgatc ccgcgaggtg cgctgagcga ggagaagctc
     1921 atcgtcgccg aggcgcggac ctcatcgctg gtggacgtgc agttcgagcc cgaggggctt
     1981 cagttccagg tgccggccac gctgacgctc agctacaaga actgcgacgt gccggccggt
     2041 gtcgacctca tggtggcgta tctgagcgtc ggcaatcaga tcgcggagct gccgccgtcg
     2101 gaggactacc ggtcatattc ggaagtcatc ggagagatcc gccacttttc gaggtatgcg
     2161 gtagcgtatt aaacgggcgg agagacagag ggtcggaggg ggacggaggg tcggagggct
     2221 gacttgttaa atcatctacg ttctccgcct ctccgactct ccacctctcc gaccctccgc
     2281 ttaccgtccc gtcggccagt tcccccccag cgcgcgatac agctggaccg cggcagagag
     2341 ctggcccagc tgcgcctggc tcagcgccag ctcggcgtcg aacagactgc gttgggcttc
     2401 gagcacctcg atatagctcg caatgccggt gcgatagcgg agctccgcca gctgcagcgc
     2461 tcggcggagc gcctcggcct gggtctgctg ggccaccacc tggtctcgcg acgtacgcac
     2521 tcccgccagc gcgtcactcg cttcccgcag cgcgatgagg acgctctgct cgtactgtag
     2581 tctggcctgg tcggcccggg cccgcgccgc acgagtctgg ttgatcagcc gaccgccggt
     2641 gaaaagcggg agggaaacgc cggcgagtgc ctgatagatc tcactgttac tgccgaagag
     2701 gtcaccggcc ctgggcgcct gactgccgta agaagccgtg atcgagatgg tgggcagccg
     2761 agccgcttga gctactccga tgcgggcggt tgccgcggca taggcgcgct ccgccgcctg
     2821 cacgtcgggc cgcctctcca gcagcgccgc ggggagcgaa tcgggcaccc gcagagcttc
     2881 cacgatcccc accagacttc cccgccgtcc gatcgccgtc ggcgcctggc ccagcagcag
     2941 actgagctga tgctcctgtt cggctcgaaa gcgctcggtt tgcgccagcg tcgccgccgg
     3001 caccgccacc tgcgcctcga attgacgcac gtccagctcc gaggtcagcc cctgctggaa
     3061 ccgcctccgc gccagattga gcgtcgcctg acgcgaggcc agcgtccgct ccgccagcga
     3121 gcgctcctgg tccagctcca agagcgacag gtagctggtg gccacgtcgc tcaccagtga
     3181 caggagcacc gcgcgctggg tcgcctcctg cgaagcgaga tcggcccgag cagcctgcag
     3241 cccacgacgg attcgtcccc agaagtcgag ctccctggca acgtcggcgg tcacccggaa
     3301 ggcatcgaat tg
//
LOCUS       DASRPQ010000321         1109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_34279, whole genome shotgun sequence.
ACCESSION   DASRPQ010000321 DASRPQ010000000
VERSION     DASRPQ010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34279"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..271
                     /locus_tag="VFD73_03750"
     CDS             <1..271
                     /locus_tag="VFD73_03750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73133.1"
                     /translation="QKIFAADPRLGFLSHAAMTADQVASGAVPAGRGARLIFNDRLDA
                     VVTFSYMVVTILVVLASAREWALILTRRKPATAKESPFVETAYAG"
     gene            261..554
                     /locus_tag="VFD73_03755"
     CDS             261..554
                     /locus_tag="VFD73_03755"
                     /inference="COORDINATES: protein motif:HMM:NF016234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HZI73134.1"
                     /translation="MRGRGDVRNVGNRAAVEAAEGDEGKAKRRTAKRSTVPSFLSFRT
                     FLTFLRRIAGMPDYRAHVEHLRRCHPESPIPSEREFFEDYLQRRYQNGATRCC"
     gene            complement(564..>1109)
                     /locus_tag="VFD73_03760"
     CDS             complement(564..>1109)
                     /locus_tag="VFD73_03760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73135.1"
                     /translation="PGLTAEDVLPSLHAIELERRRAVLGDSAVLADILRRVTKKDYDH
                     GDAWVLGRLGAGAVDSLSARFRSADSDEFRVRYLTLLSYFTDPKLISLLSQVYGAPDS
                     FKIPKRYAIRASDGLLWIGTRQSLQALLDARERARKSGVYADSSLARGGYDFLANDSS
                     AVISRTGKWLTEWVKELAGAS"
BASE COUNT          207 a          362 c          336 g          204 t
ORIGIN      
        1 gcagaagatt tttgccgccg atcctcgcct cggatttctc tcccatgctg caatgacggc
       61 ggaccaggtc gcttcgggcg ccgtgccggc tgggcgaggc gctcgcctca tcttcaacga
      121 tcgcttggat gcggtagtga ccttctccta catggtggtg acaatcctgg tggtgctcgc
      181 ctcagcccgc gaatgggcgc tgatcctcac tcgccggaaa ccagcgacgg ccaaggaatc
      241 gccttttgtg gagacagcgt atgcggggta ggggggacgt gaggaacgtg gggaaccgag
      301 cggcagtcga ggccgccgaa ggcgacgagg ggaaagccaa acgtagaact gccaaacgtt
      361 ctactgttcc gtcgttcctc tcgttccgca cgttcctcac gttcctacga cgtatcgctg
      421 gtatgcccga ctaccgcgcg catgtcgagc acctgcgccg ctgccatccg gaaagcccca
      481 tcccgagcga gcgagagttt ttcgaggact acctacagcg acgctaccag aacggcgcca
      541 cccgctgctg ctagccccgg ctcttagctc gcacctgcca gctccttcac ccactcggtg
      601 agccatttcc cggttcgaga gatcacggcg gagctgtcat tcgccaggaa gtcatacccg
      661 ccgcgcgcca gactcgaatc ggcgtagacg cccgatttgc gtgcgcgttc tctcgcatcc
      721 agcagcgctt ggagactctg tcgggtgccg atccagagca gcccgtccga cgctcggatg
      781 gcgtagcgct tgggaatctt gaagctgtcc ggtgcgccgt agacctggct gagcagggag
      841 atcagtttcg gatcggtgaa gtaggagagc agagtgagat agcgaacccg gaactcgtcc
      901 gaatcggccg accggaatct ggccgacagg gaatcgacgg cgcctgcccc cagccgtccc
      961 agcacccagg catcgccgtg atcgtaatcc ttcttggtga cccgccgcag aatgtccgcc
     1021 agcacggcag agtctcccaa caccgcccga cgccgctcca gctcgatagc atgtaatgag
     1081 ggaagcacat cttctgccgt gagccccgg
//
LOCUS       DASRPQ010000322         2700 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_974788, whole genome shotgun sequence.
ACCESSION   DASRPQ010000322 DASRPQ010000000
VERSION     DASRPQ010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2700
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_974788"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..180)
                     /locus_tag="VFD73_03765"
     CDS             complement(<1..180)
                     /locus_tag="VFD73_03765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73136.1"
                     /translation="MANRRRYFVKWLRSLAEMWQSGELNREDAIADMVMALNTYEEQS
                     LALRPKLRGVTAPRKA"
     gene            complement(1003..1266)
                     /locus_tag="VFD73_03770"
     CDS             complement(1003..1266)
                     /locus_tag="VFD73_03770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73137.1"
                     /translation="MTERTWAAAERRLPVSASDLPRQERKLFYGFRTGCVAECALLRT
                     GWSRALDEWIRPSAMRARLPGERSRITGIQCRTIGEWLRRDAV"
     gene            2383..>2700
                     /locus_tag="VFD73_03775"
     CDS             2383..>2700
                     /locus_tag="VFD73_03775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73138.1"
                     /translation="MRVSRLSFIVVALAACSERTDQLRSDLDAAAAPLVRPAALRVST
                     EPVLVRSSETAVPHLSSDTLPWTDSAVRGDTTLLTRGRAITTTSVVTDSQWIHVAAPP
                     RQKG"
BASE COUNT          470 a          947 c          795 g          488 t
ORIGIN      
        1 tgcctttcgt ggagcagtca cccccctgag ctttggcctc aaggccagcg actgctcttc
       61 ataagtgttc agagccatga ccatgtctgc aatggcgtcc tcccggttaa gctcgccgct
      121 ctgccacatc tcggcgagag atcgaagcca cttcacgaag taacgtcgtc ggtttgccac
      181 aggagctcca aattcaagat tagcggtgca gtgccaggct gttggctgtg agctgcggca
      241 ttgggacagc cggctatcgg ggtatgagcc catgctcgac tgattcacag ctcacagcca
      301 aacagctgtc gtgccgtcgc ggaaatgttg ctttgcggcg ggatccacac ggccagttcg
      361 ctacccgtcc gggtcccctc gtgtcgatga ctcggggcag agactgccct gagctcgtcg
      421 aaggaactct cgcaatgact gcgtcaggct gcgggtctga gatcgtgctg aatcggcgcc
      481 gtctgttctg caatgagcct cgccctgcgc tcgagatccc ggaggatcat gagctgcgcc
      541 aggactgttc gacgttcgcc gccaccggca ggctgtcgta attctttgac atgatatccc
      601 tccggcccag gtccctcgag tcgacccgct cagcgctcac cgcttaccgt cggtgtgcgc
      661 ccttccttat atagagaacg atcagctctc ctccgccgcc gctcgagcag ccgtgtcatc
      721 tgcacacatc caattagcca agaggagaca cctctttatg gctgaaaggg aaagcccgga
      781 tggcgcgcag gtcgcaatcg gaaccgccaa ggctctcccg cggccaaaca aggcttcctc
      841 cgcttgggac aaggtctcca ccaggccaaa caagactcgc tccgcgcccg acagactccg
      901 ctcggcactg gacaaggtcc gcacggcgag agtccgcctc cgttcggctg ttgtccgcga
      961 gcgggcgccc gctggccagg acacgctcag aaccggccca gctcacaccg cgtcgcgcct
     1021 cagccactct ccgattgtcc ggcactggat gccggttatc cggctccgct ctcccggcaa
     1081 ccgcgctcgc atcgcggatg gccggatcca ttcgtccagc gctcgggacc accccgtccg
     1141 gagcagggca cactcggcga cgcacccagt cctgaacccg tagaacagct tccgctcctg
     1201 gcgcggcaga tccgaggcag agaccggcag cctccgctcc gccgccgccc aagtccgttc
     1261 cgtcactgcc cgctttcagt tctcgtgcag caggaaccgc gcaaccggag cacccatccg
     1321 taccggtggg agccgactcc gcgaagccat agcccagctt cgaaaccgta gagacaggac
     1381 gaggtccgcc cgaggccggt ctcacactcg ggtgacccgg acgcgcatcg gcttcggccc
     1441 gggcggcact ccagtagttc gacagcgtat cggctttggc aggctccgca ccatgactgc
     1501 cagggtccgc atgaaagccg ctcgcatccg cattgcgacc gccaatgtcc gcgcggtaag
     1561 cggcagcctc cacgccaggg gcgcccctgt ccgtgcgaca ggcgccagca tccgcaccgc
     1621 accagtcagc ctcgacaatc ccatcggccg gcgccgcatc gctctgatcc gcgtccgcct
     1681 cgccgcgatc caaacccgaa ttgtcattgc cgacatccct tctgccgagg ccggcgttgc
     1741 tcctccgtca atcggggtcg tgccggcagc gggcagatcc gttcttgact ggcccgactc
     1801 cgcgtggcgg aagtccaact gcgcacggcc ggtggccgat gccgtgcttc aaggaacggg
     1861 gtccatacct ggccggctgc gaccacatcg aaggtgtcca acgccaactc ggcgtcagcc
     1921 gagtccgcac agcagttgtc cgaccggtac tcgcgccagc tcgactccac ttccggacga
     1981 tcccatgcct gctctcgcgg gaacggctcg cgttttcgcg cgcacacgcg cactcgcgtg
     2041 agtgtgaatc ggaaaatcac aaatgtgctt tttgaaaatg tggcacactc ctcgcgatcc
     2101 ggcgttttcc gccgaatgat gatcgggagc attcgcgcat ccacttgaat gacacgccga
     2161 cggcgggacg ccaccgtcgg gcgggctcag gccggcggca tgatcggtaa gcgggtaagc
     2221 agtgagcagg aagcggtgag cggtgagcgg tgagtggtcc tgacttgccg ccgccgctga
     2281 ctgtctgcct caccgcctgc aataaccgct caggtttgag gtcccgaaac catttattct
     2341 tggagttcat cctttaacag ggggttccgg aggagtagtc gcatgagagt gagccgtctt
     2401 tcctttatag tggtggcgct ggccgcttgt tccgaacgca ccgaccagct ccgaagcgat
     2461 ctcgatgccg cggccgctcc gttggtccgt ccggcggcgc tccgggtgtc gaccgaaccg
     2521 gtcctggtgc ggagctcgga gaccgccgtc cctcacctct ccagcgacac gctcccctgg
     2581 accgactccg ccgtccgggg cgacaccacc ctcctcaccc ggggacgggc gattaccacc
     2641 acctcggttg tcaccgactc gcagtggatc cacgttgccg cgcctcccag gcagaagggc
//
LOCUS       DASRPQ010000323         1020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2227803, whole genome shotgun sequence.
ACCESSION   DASRPQ010000323 DASRPQ010000000
VERSION     DASRPQ010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2227803"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          183 a          341 c          320 g          176 t
ORIGIN      
        1 gaagcaatgc gccaccaggg cgccgatcga tgcgtcctac ctcggcgcgc tcctgcagat
       61 tgcagcacca ccaagcctgg cgccgcgtcg gcgcaggtca cagggcttat cgtacctctg
      121 ggcgaggcac ccagcgaccg agggggcagc gtccaccacg tccacgctgt ctcatcccgt
      181 gccattccgt accatccagt cccccggtct cgccgccagg ccgcgcggag ccctgctcct
      241 actacacctt ttactaaagc ggccgatacg caaaaggccc tcgccccact gggaaagggc
      301 cttgacctgc gaaaactagt agcgggggcg ggatttgaac tcgcgacctc tgggttatga
      361 gcaagccgac cgccgtccca gcccaccccg gcccgtcgca cacacccctg ctggcctcgc
      421 ccggcggcac tgtgccgtct cagcctgtcc cactatgtcc ggcttgttcc gaggagtctt
      481 ggtcacaatc agggtcacgg gcgccggccc gggtcagagg tatctgcgac agtccaaagc
      541 gcggatcgca gattcggatg cgtcggcaaa atccgtctgc ttcacagact ggcggcgaag
      601 tgacgctacc gactcgcgct acgggcgaat gttggtcctg ggtgccggtt tcggggacgt
      661 tctctacagc gcgtggcctc gtagagccct cgccagtcga accggccttc attcacccgc
      721 atgtcgcggc ggcctaggcc cacgctatcg gtgagggttt ccactagcgg cggcgtctgg
      781 ccctcgacca gcggggttca tgcgtggaag attgtgatgc gatcgaatgc agcaagacgg
      841 acgacccggg gggcgcatga cggatctggg gacgatcctg gctgagtact ggccgctcag
      901 gagctatgaa agagccttcc aggaggccat caccgcggac gacctgagac agccgattcg
      961 agacctaacc ggcgtcctgg acactgaagg tttgaagcgc gagtggcgtg gcgaactgct
//
LOCUS       DASRPQ010000324         1061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_350825, whole genome shotgun sequence.
ACCESSION   DASRPQ010000324 DASRPQ010000000
VERSION     DASRPQ010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_350825"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            335..>1061
                     /locus_tag="VFD73_03780"
     CDS             335..>1061
                     /locus_tag="VFD73_03780"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HZI73139.1"
                     /translation="MVVKPVALDAWRDELEQVQDRLGELFVRPEPRQQAGLYLEALLS
                     SAERKNGWQLAEQIGDARPWRTQRVLSDALWSQDKARALCRSYVIEHLGAPDGVLVVD
                     ETGFLKKGTKSVGVARQYSGTAGRVENCQIGVFLSYGSSKGHALIDRELYLPKAWTDD
                     RERCDAVSVPPERAFMTKPQLAQLMIERAIAARVPFSWVAGDEVYGNDRRLRLWLEQQ
                     ERPYVLAVRSTETLGVQLADQEPG"
BASE COUNT          196 a          309 c          355 g          201 t
ORIGIN      
        1 ttgccgccgc ggctccggcc gcacgaagag ctctcccagc cggtcctgca cctgctccag
       61 ttcatcccgc cactggtcca aaacgaccgg cttcaccacc atacccacgt cgatcaacac
      121 cttcaaacgc ttcaactcgc agcccgactc gctgctcttg taatattaca tggtgcctta
      181 acgccaaaat gcaaatcaaa attcccaact gtagtattag tactacagtc gcggttttcc
      241 gcttgcgatt ttccgtcaag acaccatgta tcattgcgag tgcggcgcag aaggctgcgg
      301 gttgaggcgt ttgagggtat agatcgacgt gggcatggtg gtgaagccgg tcgctttgga
      361 cgcgtggcgg gatgaactgg agcaggtgca ggaccggctg ggcgagctgt tcgtgcggcc
      421 ggagccgcgg cagcaggcgg gtctgtatct ggaagccctg ctgagttcgg ccgaacgcaa
      481 gaatggttgg caattggccg aacagatcgg cgatgcccgg ccctggcgca cccaacgcgt
      541 cttgtccgac gcgttgtgga gtcaggacaa ggcccgggcc ttgtgtcgca gctatgtgat
      601 cgaacacttg ggtgctccgg atggtgttct ggtcgtcgac gagacggggt tcttgaagaa
      661 aggaaccaag tcggtcggtg tcgctcgcca gtactccggc acggcggggc gggttgagaa
      721 ttgccagatc ggggtgttcc tgagctacgg cagcagcaag ggtcacgctc tgatcgaccg
      781 ggaactctac ctgcccaaag cctggaccga cgatcgggag cgctgtgacg cggtcagcgt
      841 gccgccggag cgggcgttca tgaccaagcc gcagctggcc cagctcatga tcgagcgcgc
      901 gatcgccgcg cgggttccgt tctcctgggt ggccggcgac gaggtctacg ggaatgaccg
      961 ccgactgcgg ctgtggctgg agcagcagga gcggccgtat gtgctcgcgg tcaggagcac
     1021 cgaaacgctg ggggtgcagc ttgccgacca ggagccgggg c
//
LOCUS       DASRPQ010000325         1495 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1602054, whole genome shotgun sequence.
ACCESSION   DASRPQ010000325 DASRPQ010000000
VERSION     DASRPQ010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1495)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1495)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1495
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1602054"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1045)
                     /locus_tag="VFD73_03785"
     CDS             complement(<1..1045)
                     /locus_tag="VFD73_03785"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZI73140.1"
                     /translation="MASHRAFTAGATTTPAAQSPGTRMSARDATPASRGQGLTRAALY
                     ARVSTDKQEREETIASQVDLLQQTAQARGYEVLPGNLFIDDGVSGARLDRPALERLRD
                     LAAEGAFEVVLVTAPDRLARRYAYQVVLVDELTRQGCEVVFVQQSLGASPAEQMLLQM
                     QGVFAEYERALIHERTRRGQLFAARQGRVNWGNPPYGYTYIRKTPTTPQHVVINEAEA
                     EIVRQVYRWCVEEQMSSYAIHQRLTAQGIPPRKASPRGWAQSSVIEMLRDSLYKGEAY
                     YNRTQPGDVRRPHGRRGLKDRPPGNGQGRMRRPQTEWIPVRVPAIIDPETWERAQGQL
                     ARNRERAQRNNTQH"
     gene            1310..>1495
                     /locus_tag="VFD73_03790"
     CDS             1310..>1495
                     /locus_tag="VFD73_03790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73141.1"
                     /translation="MQRLSVDQLASIPEEQVWLASRKSARTRRAYHNDVAHFMRTFNI
                     QTPEELRKIDHRAVMAWE"
BASE COUNT          268 a          467 c          464 g          296 t
ORIGIN      
        1 gatgctgggt gttgttgcgc tgcgcgcgct cgcggttccg ggccagttgg ccttgggccc
       61 gttcccaggt ctcgggatca atgatcgcgg gtacccggac tggaatccat tcggtctgtg
      121 ggcgtcgcat acggccctgg ccgttgccgg gggggcgatc cttgagcccg cgccgcccat
      181 gggggcgtcg gacatcccca ggctgcgtac gattgtaata ggcttcccct ttatagagag
      241 agtcgcgtaa catctcaatc acactacttt gggcccaccc ccgtggggaa gccttccgag
      301 gcgggatccc ctgggccgtg aggcgctgat gaatagcata cgaactcatc tgctcctcca
      361 cgcaccagcg atagacctgc cgcacaattt ccgcctcggc ctcattgatc actacatgct
      421 gtggggtggt gggcgttttc cggatatagg tgtagccata ggggggattc ccccagttga
      481 cccgcccttg gcgcgccgca aacagctgcc cgcggcgggt acgttcatgg attaaggcgc
      541 gctcgtactc tgcaaagacg ccttgcatct ggaggagcat ctgttctgcg gggctggccc
      601 ccaggctctg ctggacaaag accacctcac agccctgtcg cgtcaattca tcgaccaaca
      661 cgacctgata ggcataacgg cgggcgagac ggtccggggc cgtgaccagc acgacctcga
      721 aggcgccttc agccgcgaga tcgcgcaacc gctcgagggc gggccgatcc aggcgtgcgc
      781 cactgacgcc gtcatcgatg aagaggttgc ccggcaggac ctcatagcct cgcgcctgtg
      841 ctgtctgctg gagcaagtcg acctgactcg cgatggtttc ctcccgttct tgtttatccg
      901 tggagacgcg ggcatacaag gccgcccgcg tcaggccctg ccctcgcgac gccggcgtcg
      961 cgtctcgggc cgacatacgg gttccgggac tctgggctgc tggggttgtc gtggctcctg
     1021 ccgtaaaagc tcgatggctt gccatacgcg ttccctcccc tcgcgacatg gaactctgac
     1081 acaaagaatc acttcgactc gtggaggacc ctcggacgcc ataggcctcc ctcctgtgtg
     1141 catgctggtc atccttcatg atcgttgcct ctctttagca gagcggtgat cctgatgcac
     1201 attcacggtg ggagtggggt gggggccacg atgaccccag aggggcagga caacctcaaa
     1261 ggttaggcgt gtttgggttg taaacggaac agcttgggca aaaaacccca tgcagcggct
     1321 cagcgtggat cagctcgcca gcattccgga agaacaggtc tggctcgcga gtcgcaagag
     1381 tgcccgcacc cgccgggcct accacaacga cgtggcgcat ttcatgcgca cctttaacat
     1441 tcagacgcca gaagagttac gcaagatcga tcatcgcgcg gtcatggcgt gggaa
//
LOCUS       DASRPQ010000326         1084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2227961, whole genome shotgun sequence.
ACCESSION   DASRPQ010000326 DASRPQ010000000
VERSION     DASRPQ010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2227961"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            103..>1084
                     /locus_tag="VFD73_03795"
     CDS             103..>1084
                     /locus_tag="VFD73_03795"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HZI73142.1"
                     /translation="MEFPLTLAHIFERAGRLFPRSEIVSRLPDKSLHRHTYADFFRRS
                     QGLISALRKLGLKRGDRVATLMWNHYAHLEAYFAVPCAGGVLHTLNLRLAPDDIAYIA
                     SHAGDRFLIVDDVLLPLFDKLKANAKFEKVIVVPLTGAPVAKEYEDYERLIGRARAVK
                     LPRLREDDPAGMCYTSGTTGRPKGVVYSHRALVLHTLVSALPDVLGLANGDTVCPVVP
                     MFHVNSWGIPYTAVMIGSKIVFPGPHLDAVSLLDLYQSEGVTLTAGVPTIWGGILQAL
                     EQEPSRWKLTPGMRMVVGGAAAPETLFRAFDRFGLRVIHGWGMTETTPVAS"
BASE COUNT          179 a          349 c          344 g          212 t
ORIGIN      
        1 ttcggtcgca gccagcgtca tgcagctctg ggcggtcatc ctgctattca cgagcccggg
       61 taaaggctgg tttggtaaga aggcgtcgga cccggcgccg tgatggagtt tccgctcacg
      121 ctcgcgcaca tcttcgagcg cgcgggccgg ctgtttcccc gctccgagat cgtttcgcgg
      181 ctgcccgaca aatcgctcca tcgccatacc tacgccgatt tcttccgccg ctcgcagggg
      241 ctgatctccg ccctgcgcaa gctcggcctc aagcgaggag accgggtagc gacgctcatg
      301 tggaaccact acgctcatct cgaggcgtac ttcgcggtgc cgtgcgcggg cggggtgctg
      361 catacgctca acctcaggct cgccccggac gacatcgcct atatcgccag ccatgcgggt
      421 gaccgtttcc tgatcgtcga cgacgtgctt ctgccgctgt tcgacaagct caaggccaat
      481 gcgaaattcg agaaggtcat cgtcgtgcct ctgacgggcg cgccggtggc gaaggaatac
      541 gaggactacg agcgtctcat cgggcgggca cgtgcagtga aactgcccag gctcagggaa
      601 gacgatcccg ccggcatgtg ctacacctcc ggcaccaccg ggcggccgaa gggcgtcgtt
      661 tactctcacc gtgctctggt tctgcacaca ctggtgtcgg cgctgccgga tgtgctgggc
      721 ctcgccaacg gagacaccgt ctgcccggtg gttccaatgt tccacgttaa ctcctggggc
      781 attccgtaca ccgccgtaat gatcggctcg aagatcgttt ttccggggcc gcacctcgat
      841 gccgtgagcc tgctggatct ctatcaatcg gagggcgtaa cgctgacggc aggcgtgccg
      901 acaatctggg gtggcatcct gcaggcgctc gagcaggaac cgtcgcgctg gaaactcacc
      961 cctggcatgc ggatggtggt cggtggagcg gcggcaccag aaaccctgtt ccgtgcgttc
     1021 gaccggttcg gtctcagagt cattcacggc tggggcatga ccgagaccac gccggttgct
     1081 tcgg
//
LOCUS       DASRPQ010000327         1168 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3178536, whole genome shotgun sequence.
ACCESSION   DASRPQ010000327 DASRPQ010000000
VERSION     DASRPQ010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3178536"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..844)
                     /locus_tag="VFD73_03800"
     CDS             complement(<1..844)
                     /locus_tag="VFD73_03800"
                     /inference="COORDINATES: protein motif:HMM:NF014759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease H3TH domain-containing
                     protein"
                     /protein_id="HZI73143.1"
                     /translation="MIVHLVDGTYELFRHFYGLRRFNKGKDAPLGAVFGVLNTLLELI
                     ETGATHVGVATDHVIESFRNELWPGYKTGAGIDPALLSQFQPLEDAIAALGVTVWPMV
                     ELEADDALASASHIASAELAVEKICIWTPDKDLAQCVEGDRVVQVDRRAHKIRDAAGV
                     REKFGVDPPLIPDLLALVGDAADGYPGIPGIGATTAARLLNRYGAIESFPDTVLGTGR
                     ELALLFKDLATLRTNEPLFERAESLVWRGPTPAFATFNDYPGGARLLERCRKAEEKFG
                     GGVDS"
     gene            complement(856..>1168)
                     /locus_tag="VFD73_03805"
     CDS             complement(856..>1168)
                     /locus_tag="VFD73_03805"
                     /inference="COORDINATES: protein motif:HMM:NF024922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-ketoglutarate-dependent dioxygenase AlkB"
                     /protein_id="HZI73144.1"
                     /translation="SFAGLVPEQLAQVLLTEYDAGATIGWHRDKSVFGDVVGISLLSA
                     CRFRFRRKVGTDWQRASVTAEPRSVYLLRGPSRTDWEHSIPAVDALRYSVTFRTLRSK
                     G"
BASE COUNT          224 a          373 c          362 g          209 t
ORIGIN      
        1 cggaatcgac acctccccca aatttctctt cggcctttcg gcagcgctcg agcaatcggg
       61 cgcctccggg gtagtcattg aacgtggcaa acgccggggt cggcccacgc cacacgaggc
      121 tctccgcccg ctcgaacagt ggctcgttcg ttctgagtgt ggccagatcc ttgaataaca
      181 gcgccagctc ccgcccggtc cccaacaccg tgtccggaaa gctttcgatt gccccgtagc
      241 ggttcagcag tctggcggcg gtagtggccc cgatgccggg aatcccgggg tatccgtctg
      301 ctgcatcgcc aaccagggcc agcaggtccg gtatcagcgg aggatcgact ccaaatttct
      361 ctcgtacgcc cgccgcatcc cggatcttgt gggctcgacg atccacctgc accacccggt
      421 cgccctctac acactgcgcg agatccttgt ccggggtcca aatacagatc ttctccaccg
      481 cgagctcagc ggaagcaata tggctggcgg acgcgagagc atcgtcggcc tccaactcga
      541 ccatcggcca gaccgtcact cccagggcgg cgattgcgtc ttcgagtggc tgaaattggc
      601 tgaggagggc gggatcgatg ccggccccgg tcttgtagcc gggccagagc tcattgcgga
      661 acgactcgat gacatggtcg gtggcaacac cgacatgggt ggctccggtc tctatcagct
      721 cgagcagggt attcagcacc ccaaacaccg ctcccagggg tgcatccttt cccttgttga
      781 accggcggag gccgtagaaa tggcggaaca gctcgtaggt tccgtcgacg agatggacga
      841 tcattggttt ctgaatcagc ctttggagcg caacgtccgg aaggtcaccg aatagcgaag
      901 agcgtcaacg gctggaatgc tatgctccca gtccgtgcgg gaagggccgc ggagaaggta
      961 aacggagcgc ggctccgccg tgactgaggc gcgctgccaa tcggtgccga ccttgcggcg
     1021 gaaacgaaag cggcaggccg acaggagcga gatgccgaca acatcaccga agacactctt
     1081 gtcccggtgc cagccgatgg tcgcgcccgc gtcgtactcg gtgagcagca cttgggcgag
     1141 ttgttctgga accaggcccg cgaagctc
//
LOCUS       DASRPQ010000328         5262 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1922841, whole genome shotgun sequence.
ACCESSION   DASRPQ010000328 DASRPQ010000000
VERSION     DASRPQ010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5262
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1922841"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..778
                     /locus_tag="VFD73_03810"
     CDS             <1..778
                     /locus_tag="VFD73_03810"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HZI73145.1"
                     /translation="TAYAVLVEAWRRVVLSMGQRLPFFSAVRIWFLASLGKYIPGKVW
                     AVAGAAVLARRAGVDPSVAVAGALVLQALALASGAAAVALTARDALQALGPAAVPIAA
                     VLLGLSAVGLAALASQSWLDRISRLLPSSFPRLRAVGLGILTLAFAANLLAWALYGSA
                     LLLLTRGVLPEVSLSLPQAIGVFTCSYLAGFVALFAPGGLGPRESVFLLMLAGDIGLK
                     PAAGLALASRLLLTGTEVLPAVPLLLLRRDATSPPSVREA"
     gene            779..3151
                     /locus_tag="VFD73_03815"
     CDS             779..3151
                     /locus_tag="VFD73_03815"
                     /inference="COORDINATES: protein motif:HMM:NF042625.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6541 family protein"
                     /protein_id="HZI73146.1"
                     /translation="MEQAKSPELDQMPRWVPFAVMAGLTLLVFRQYVLSGPGQMLLGQ
                     DTIAAGIMFRKFFVEHMRALGRLPLWNPYLFGGVPTIEAGSGDILYPTSILHFLLPLT
                     SALAWKLILHVYLAGVLMYLAARALGARRYVALFAGSAYLLSANLVSLVWGGQDGKMY
                     VTALFPGALWLLITAIDRRSWIRFLWLGVVAGLMVIAHPQLAYYAYIALAAYAAGSLW
                     SRREEGGAVLASRLAGGMVAVVTAIGVAAVVLLPMYRYLREDSPRAGPGRGFEYSASW
                     SLHAEELVSLFVPEFSGTDVQSETYWGKNPFKHNSEYGGALVLVLGIAALAGVKGDRR
                     RWGLGSMALVAVLYALGAGTPFFRVVYALIPGVKNFRAPSLATFVAIAALTLLASLLL
                     ERAVAEEDPQARRIGAMALVIGAAIALLIGAAALAGGPGLYSTWGSIFGVAEIDRGAA
                     FAANLSRLAGGALLVALLCGLAAAGLYLRGRRALTGKQLVIILVCLTALDLLRVDNRY
                     IQVVRYEDFFPADPGIESLRDRLAPGERVLSVGGVYPEGFLATYGVPEVFGYHGNQLR
                     WYNALTRYDVRQGARSASEAQQYWLSFLNSGALRSLAARYVLLPGQVELPGYRLLGSD
                     QRVAVYVNDAAMGGAAVVPEVQVEPDSARRIALLWSPTFDPSKTTIVEQPVLAVGEAG
                     GTGTATIDGNGDDTLAVRVHSTGPALLAISRTYHPSWEAEIDGVPAPVLRANHALMAV
                     PLTRAGDHRVILRYRPRIVYVAAGISAATWIMVLLASALAGALVLRQPRG"
     gene            3144..3863
                     /locus_tag="VFD73_03820"
     CDS             3144..3863
                     /locus_tag="VFD73_03820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenol monophosphomannose synthase"
                     /protein_id="HZI73147.1"
                     /translation="MAERFLVVVPTYNERVNLPLVVPAILSQDPRFEVLVVDDNSPDG
                     TGQLADELAASTPRIHVMHRPGKSGLGKAYLAGFRWALDRGYDLIFEMDADFSHDPKF
                     LGDLVCASSNADVVIGSRYRSGVNVINWPISRLLLSIGANQYARWITGLPLTDSTGGF
                     KCFRREVLESIDLEKVRSNGYAFQIEMSFRAWKKGFRLVEIPIVFTDRVEGQSKMNKR
                     IVREAIWMVWWLRLQAMFRRL"
     gene            3884..4705
                     /gene="dapF"
                     /locus_tag="VFD73_03825"
     CDS             3884..4705
                     /gene="dapF"
                     /locus_tag="VFD73_03825"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HZI73148.1"
                     /translation="MTGSGNDFVVLDGRVSVAAQWMAPQIRALCDRRNGVGADGLVIL
                     TPVAGEAVRMQYWNLDGSVGAMCGNAALCSARLARVLDMVAAPEFCLLTDSGTVRVRT
                     EEGREPEINLPDVELDPEPLAGIDLGPGERWMRFVRVGVPHLVVRVDDVGTIDIPTRG
                     RSLRWHPALGPEGANANFISHQVGGDAPWLIRTYERGVEGETLACGSGTVAATLALAS
                     AGEAKPRLVLRSRGGLPLEVHATLEGNRARNIWLRGQGRLVYRGYVSSAQISNPT"
     gene            complement(4881..>5262)
                     /locus_tag="VFD73_03830"
     CDS             complement(4881..>5262)
                     /locus_tag="VFD73_03830"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI73149.1"
                     /translation="REAVITLNQVRMVNGQSELAAVGLREFLSSKPPAKYLAPADGLL
                     GAALENSKRWAEAANAYTQAADAAGVDYLKAAYLVDAGRAFREAGRTDDAIKTYRTVV
                     QKYADSPSLTEAQVRLAELTQGRM"
BASE COUNT          815 a         1630 c         1713 g         1104 t
ORIGIN      
        1 taccgcttac gccgtgctgg ttgaagcgtg gcgccgcgtg gtgctcagca tggggcagcg
       61 gttgccgttt ttttcagccg tccgaatctg gttccttgcc agcctcggca agtacatccc
      121 cggaaaagtc tgggcggtcg cgggagctgc agtgctggct cggcgcgcgg gcgttgatcc
      181 ctcggtagcc gtggctgggg cgctggtact ccaggcactg gcgcttgcca gtggcgcggc
      241 agcggttgcg ctgacggccc gagatgctct tcaggcactc ggtcccgccg ctgtgccgat
      301 tgctgccgtg ctgctgggct tgtccgctgt aggactggcg gcgctcgcct cccaatcatg
      361 gctcgaccgg atcagccgtc ttctgcccag ctcgtttccc cggcttcgcg ccgtcggcct
      421 cggcattctc actcttgcct ttgcggccaa ccttctggcg tgggctctct acggatcggc
      481 cctcctcctt ctcacccgcg gtgtgcttcc cgaggtcagt ctgagtctac cgcaagcgat
      541 tggtgtgttc acctgctctt acttggcagg gttcgtcgcc ctctttgctc ccggcggcct
      601 cggtccgcgc gaatccgtgt ttctgctgat gctggccgga gacatcggac tcaaaccggc
      661 agccggtctg gcactcgcca gccggctgct ccttaccggg actgaagttc tgccggcggt
      721 gccgctgctc ctgctgcgac gcgacgccac gagcccaccg tcagtccggg aggcgtgagt
      781 ggagcaggcc aaatcccctg agctcgacca gatgccacgt tgggttccgt ttgctgtgat
      841 ggctggtctc acgctgctgg tcttccgcca atacgttctc agcgggccag gccagatgct
      901 cttggggcag gacacgatcg ccgctgggat catgttccgc aaattctttg tggagcacat
      961 gcgggcgctg ggtcggctgc cgctctggaa cccttacctg ttcggtggag taccgaccat
     1021 cgaagccgga agtggggata tcctgtatcc cacttccatc ctgcacttcc tcctgccgtt
     1081 aaccagcgca ctggcatgga agctcattct gcacgtctac cttgccggtg tcttgatgta
     1141 tctcgcggca cgcgcactgg gagccaggcg ctacgtcgcg ttgttcgccg gttccgccta
     1201 tctcctctcc gccaacctgg tcagcctcgt gtggggtggt caggacggaa agatgtacgt
     1261 gacggcgctg tttcccggcg cgctctggct cctgatcacc gcaatcgacc gccgctcatg
     1321 gatccgcttt ctctggctcg gagtggtggc gggtctgatg gtgatcgcgc acccgcagct
     1381 ggcctactat gcgtatatcg cgctggcggc gtatgccgcc ggcagccttt ggtcccgccg
     1441 agaagagggc ggagcggtgc tggccagccg gttggcgggc ggcatggtcg cagttgttac
     1501 ggctatcgga gtggctgcgg tggtgctcct gccgatgtac cggtacctcc gcgaggactc
     1561 tccccgcgcc ggcccgggca gagggttcga gtattccgcc agctggtcac tccacgccga
     1621 agaactggtc tccttgtttg tgcccgagtt ctccggaacc gacgttcagt cggagacgta
     1681 ctggggaaag aacccgttca agcacaactc cgagtacggc ggcgccttgg tgctcgtact
     1741 cggcatcgcc gcgctggccg gggttaaggg agatcgtcgc cgatggggac tgggcagcat
     1801 ggcgctggtg gcagtgctgt acgcgttggg ggcgggcacc ccgttcttcc gcgtggtcta
     1861 cgccctcatc ccaggcgtaa agaatttccg ggccccgagc ctggccacgt tcgtggcgat
     1921 cgccgcgctg acgctgctgg catcgctgct gctcgagcgc gcagtggcag aggaagatcc
     1981 ccaagcacgt cggatcgggg caatggcgtt ggtcatcggc gccgccatcg cgcttctgat
     2041 cggagctgcg gcgctggctg gaggtcccgg tctctactcc acttggggat cgatcttcgg
     2101 tgtcgcagag atagaccgcg gggcagcttt tgcggccaac ctttctcgat tggctggggg
     2161 agcgctactc gttgccttgc tctgtggcct ggccgccgcc gggctttatc tccggggcag
     2221 gagggcgctg acgggaaagc agctcgtcat catcctggtt tgcctgactg cgttggacct
     2281 cctgcgggtg gacaatcggt atatccaagt cgtgcgctac gaggacttct tcccagccga
     2341 tcccgggatc gagagtcttc gggatcgcct ggcgcccgga gagcgggtcc tgagcgtcgg
     2401 gggagtttac ccggaaggat ttctcgcgac ctacggagtg ccggaggtgt tcggctatca
     2461 cggcaaccaa cttcgctggt ataacgcgct cacccgttat gatgtccggc agggggcccg
     2521 gagcgccagc gaggcccagc aatattggct gtcctttttg aacagcggtg ccctacggtc
     2581 gctcgctgcc cggtatgtgt tgcttccagg acaggtggag ctgccggggt accgtctcct
     2641 ggggtcggac cagcgggtgg cggtctacgt gaacgatgcg gcgatgggcg gcgctgccgt
     2701 tgtccccgag gttcaggtcg agcccgactc cgctcgtcgg attgcgctcc tctggtctcc
     2761 caccttcgac cccagcaaga caactatcgt ggaacaaccg gtacttgcgg tgggggaggc
     2821 gggaggaacc ggcaccgcga ccatcgatgg aaacggcgac gacactcttg ccgtgcgggt
     2881 ccactccacc gggcccgccc tgttggccat cagccgaacc tatcatccct cgtgggaagc
     2941 cgaaatcgac ggagttccgg ccccggttct ccgggccaac catgcgctga tggcggtgcc
     3001 gttgacccgg gcaggagacc accgggtgat tctgaggtat cgtccgcgca tcgtgtatgt
     3061 cgccgccgga atcagtgccg caacgtggat catggtcctc ctggcaagtg ctctggccgg
     3121 agcactcgtg ctgcggcagc cccgtggctg agcgtttcct ggtggttgtt cccacgtaca
     3181 acgaacgggt caatctgccg ctcgtggtgc ccgccattct gagccaggat ccccggttcg
     3241 aagtcctggt ggtggatgac aactcgcccg acggaaccgg gcagctggcg gatgagctcg
     3301 ccgcctccac tcctcggatc cacgtgatgc atcggcccgg taagtccgga ctcggaaagg
     3361 cctatctggc tggattccgc tgggcgttgg atcgggggta cgatctgatc ttcgagatgg
     3421 atgccgattt ctcccacgat cccaagttcc tgggcgactt ggtgtgtgcg tccagcaacg
     3481 ccgacgtggt catcggatcg cgataccgaa gcggcgtgaa tgtcatcaat tggccgatct
     3541 ctcgccttct gctctcgatt ggcgccaatc agtacgcccg gtggatcacc gggctcccgc
     3601 tgaccgactc gacgggagga ttcaagtgct tccgccgaga ggtgctggag tccatcgatc
     3661 tcgagaaggt gcgctccaat ggttacgcct ttcagatcga gatgagtttc cgcgcctgga
     3721 aaaaaggctt tcgtctggtc gagatcccga ttgtgttcac cgacagggta gagggccaaa
     3781 gcaagatgaa caagcggatt gtccgcgagg caatctggat ggtgtggtgg cttcgcctgc
     3841 aggcgatgtt tcgtcgtctg tgagcgagct cgcgttctat aagatgaccg gctcgggcaa
     3901 cgacttcgtg gtgctcgatg gacgggtctc ggtcgctgca caatggatgg caccgcaaat
     3961 cagagcgctg tgtgaccgcc gaaacggcgt tggagccgat ggcctggtga tcctgacgcc
     4021 ggtagccggg gaggcggtcc gaatgcagta ctggaatttg gacggttcag tgggcgccat
     4081 gtgcggaaac gccgcgctct gctcggcccg gctggcccgg gtgctggaca tggttgctgc
     4141 cccggaattc tgcctgctga ccgattcggg tacggtgcgg gttcggacag aggaggggcg
     4201 tgagccggag atcaacctgc cagatgtcga gctcgaccct gagccgctgg ctggcatcga
     4261 cctgggaccg ggagagcgct ggatgcggtt tgtgcgggtg ggcgtgcctc acctggtcgt
     4321 ccgagtcgac gacgtaggta cgatcgacat cccgacgcgg ggtcgatcct tgcggtggca
     4381 tccagcgctc ggacccgaag gcgccaacgc gaacttcatc agccaccagg ttggtggcga
     4441 tgcaccctgg ttgattcgaa cctacgagcg aggggtggaa ggagagacac tcgcttgcgg
     4501 gagtggcacc gtcgcggcga ccctggccct cgcctcagcc ggggaagcca agccgcgcct
     4561 ggtgcttcgc agcaggggag ggctgccgct cgaagtccac gcgacgcttg agggaaaccg
     4621 ggcccgaaat atttggcttc ggggccaggg ccggctggtg tatcgaggct acgtgagttc
     4681 cgcccaaatc agtaatccca cctaagccag tagccaacaa gaatttagcg agttactcca
     4741 gcgtgagatc ccagttctcc acagttatcc accattctac ttaacataac atatcttata
     4801 cgacattttc caatggacaa aaagaaagga ggatcgctgc ttcggcgttt gtctctcttc
     4861 ccctgatccc ctcggaaggc ctacatgcgt ccttgcgtca gttcggccag tctgacctgg
     4921 gcctccgtga gactcggcga gtcagcgtac ttctgcacca ccgttcgata ggtcttgata
     4981 gcgtcatcgg tcctcccggc ctcccggaac gcgcggccgg cgtctaccag gtatgccgcc
     5041 ttgaggtaat caaccccggc agcatcggct gcctgcgtgt aggcgttggc cgcttcggcc
     5101 cagcgtttcg agttctccag cgccgctccc agcagcccgt ctgctggggc gagatacttt
     5161 gcgggcggct tactcgagag gaactcccgt agacccaccg ccgccagctc gctctgtcca
     5221 ttcaccatcc ggacctggtt cagagtaatc acggcctctc gt
//
LOCUS       DASRPQ010000329         1622 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1922911, whole genome shotgun sequence.
ACCESSION   DASRPQ010000329 DASRPQ010000000
VERSION     DASRPQ010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1622
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1922911"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..821)
                     /locus_tag="VFD73_03835"
     CDS             complement(<1..821)
                     /locus_tag="VFD73_03835"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HZI73150.1"
                     /translation="MADIKRRVLVTGAGGFIGHHLVTYLKERGYWLRGVDIKLPEFET
                     SRADEFLVLDLRSAENARAACDGMSEVYNLAANMGGIAFIERYKAVVMHDNVLINIHM
                     LEAARLQKVQRYLYTSSACIYPGYLQKVVDVTPLKEEDAYPADPEDGYGWEKLFSERQ
                     CRHYHEEYGLETRVVRFHNIFGPLGTYEGGREKSPAAICRKVALAGQDDEVEVWGDGE
                     QTRSYCYIDDCTEGLHRLMQSDYREPLNLGQDRMISINQLVDIVAAIAGKRIRKR"
     gene            complement(844..>1622)
                     /locus_tag="VFD73_03840"
     CDS             complement(844..>1622)
                     /locus_tag="VFD73_03840"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HZI73151.1"
                     /translation="ALPMRSHYEQIETALSVCERTGVRAKWLADIFDSARGRRQYEFS
                     EKFSVVSITGEADHHRLLLKRLVDVVGATLSLIILSPVLVCAAVTIKLTSPGPILYSQ
                     DRFGLYRRRFKMYKLRTMVMDAELLQSELEHLNEASGPVFKIKDDPRVTPIGRFLRRT
                     SIDEIPQLVNVLRGEMSLVGPRPLPMRDVGRFTEAALVRRFSVRPGMTGLWQVSGRSE
                     LSFDRWMELDMQYIDQWSLGLDLKIIAQTIPAVLRTTGAT"
BASE COUNT          312 a          515 c          462 g          333 t
ORIGIN      
        1 taccgcttac gaatgcgctt gccggcgatt gctgccacga tatcgaccag ctgattgata
       61 ctgatcatcc ggtcctgacc cagattgagc ggctcccggt aatccgactg catcaggcgg
      121 tgcagccctt cggtacaatc gtcgatgtag cagtaagacc gggtctgctc cccatcgccc
      181 cagacctcca cctcgtcgtc ctggcccgcc aatgccacct tccggcagat cgctgccggt
      241 gacttctctc ggcctccttc gtaggtgccg agcgggccaa agatgttgtg gaagcggacc
      301 accctggtct ccaggccgta ctcctcgtgg taatggcggc actggcgttc ggagaagagt
      361 ttctcccagc cgtagccgtc ttccggatca gccgggtacg cgtcttcctc cttgagcggt
      421 gtaacatcaa cgaccttctg caggtagcca ggataaatgc aggccgatga ggtgtagagg
      481 tatcgctgaa ccttctgcag tcgtgccgcc tcgagcatgt ggatgttgat cagcacgttg
      541 tcgtgcatga ccacagcctt gtatcgctcg atgaacgcga tgccgcccat gtttgcggcc
      601 aggttgtaga cctccgacat gccgtcacaa gcggccctgg cgttctcggc gctccgcagg
      661 tcgaggacaa gaaactcgtc ggcccggcta gtctcgaact ccggcagctt tatgtctacc
      721 cctcgaagcc agtaccccct ctccttgagg taggtaacga ggtggtgacc gatgaagccg
      781 ccagcaccag tgaccaggac tctccgcttg atatctgcca tgcgatcctc gggtgtctcc
      841 ctcttaagta gcgcctgtcg ttcggagcac tgccggaatg gtctgggcga tgatcttcag
      901 gtcgagcccg agcgaccatt ggtcgatgta ctgcatatcc aattccatcc agcggtcgaa
      961 gctcagctcg ctgcgaccac tgacctgcca gaggccggtc ataccaggcc gcacgctgaa
     1021 gcggcgtacc agggccgcct cggtaaagcg gccaacatct cgcatcggga gcggacgcgg
     1081 gcctaccagg gacatttccc cccgcaggac attcacgagc tgaggaatct cgtcaatcga
     1141 ggttcgccga aggaaccgtc cgatcggagt aacccgagga tcgtctttga tcttgaacac
     1201 agggccggag gcttcgttca aatgttccag ctcggactgc agcagctctg catccatgac
     1261 catggtccgg agcttgtaca tcttgaacct gcggcgatac agcccgaaac gatcctgcga
     1321 gtacagtatc gggcccgggc tggtcagttt tatcgtgaca gcggcacaca ccagaacggg
     1381 tgagaggata atcaggctta gcgtcgcccc gaccacatcc accaagcgct tcagcagcag
     1441 ccggtggtgg tccgcctctc ccgtgatact gacgacgctg aatttttccg agaactcgta
     1501 ctgccgtctt ccccgcgccg agtcgaagat gtcggccaac cacttggcgc gcaccccggt
     1561 gcgctcgcag acgctcagag cggtctcgat ttgctcgtaa tgcgaccgca tcggcagggc
     1621 ga
//
LOCUS       DASRPQ010000330         7051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1923054, whole genome shotgun sequence.
ACCESSION   DASRPQ010000330 DASRPQ010000000
VERSION     DASRPQ010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7051
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1923054"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            156..839
                     /locus_tag="VFD73_03845"
     CDS             156..839
                     /locus_tag="VFD73_03845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73152.1"
                     /translation="MTATSVMIGRRFSPATRLRLQLVFARAVEALAETYQQQAAEFVR
                     RLKSRLTVDEALQRYFREVGVPATIEETVRSRALISLAGLIENPPKPESRASGWTILR
                     PDQLIEALRRRVQHVEETNLDCRLAASMSDEAVAATHVRMALETAEVLAEEVTPDQAI
                     MLYVRTFNLPSIDAQGVFRTAMSQWAELHPLPGEPHALLQQKVAFEAETHPKLGLLPR
                     REFGLRVMV"
     gene            896..1969
                     /locus_tag="VFD73_03850"
     CDS             896..1969
                     /locus_tag="VFD73_03850"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HZI73153.1"
                     /translation="MRWSYRIGVVAGTEIKVHVTFLLIVAWWALIGYNEAGPSGALVR
                     ALALLALFACILLHEFGHILMARRFGVRTPDVILLPIGGVARLERIPDEPRQELLIAI
                     AGPAVTLVIAVLLWAVLRLTGSHANIMQLSENEPFLAQLATANIYLLLFNLIPAFPMD
                     GGRVLRALLASRLGLLRGTRIAATLGQTFAVLGGLYGITKPEPILILVAFFVFLGANA
                     EATSVETRLAGEGIQVRQMMVTDFRTIPIHATLNDAVALLLSGEQREFPVVDNLGRTE
                     GILTRDNLIRGLSLRGPQSTVAEAMSAGVPSVPSTLGFQEALDRLRSSRLPALPVIDG
                     GALVGLLTLDNITDLLLVRRARG"
     gene            complement(1975..3882)
                     /locus_tag="VFD73_03855"
     CDS             complement(1975..3882)
                     /locus_tag="VFD73_03855"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HZI73154.1"
                     /translation="MNLRAAGWLIAWALLQRSAAAQSHSGGDTLPTPPSVFRALSLPA
                     PNEYRTGSGRPGRAYWQQRADYRIVATLDTARRVLQGRETVHYTNNSPDALPYLWMFL
                     EQNICDPHGVTEQLDQPPLVFLGSTFDFSCKGFNGGLTLERITVEGRALHPQIYGTTM
                     RVDLPRPLASERTLDLSVSWRFTVPDYGAGRMGRDGSLYEIAQWYPRLAVYDDVRGWN
                     HDPYIGAGEFYLEYGSFDITLTLPAGYLVAATGTLRNPEQVLTPAQRNRLAIARTSTQ
                     PVAIVTQDEAGNSERTRPRSTGELTWKFTADSVRDFAFAAGPVLRWDASDYQGILIQT
                     FYRPQATRWTEANRMAREAIKYFSEQWYRYPYPQATTVEGPIEGMEYPMLTFVPNSPS
                     REELQWVLSHEFGHEWFPMVVGSNERLYPWMDEGFNTFIDLGGAARYFAGTPYGDSIE
                     VHPLHLYHDHAIPGREQPLIVRPVESKDLFWTGYQKPALMMQTLRYEVLGKDRFDRAF
                     RDYINAWAYKHPTPADFFRLMRDASGMDLDWFWRDWIYTTARLDQAVDSIGTDRVYLA
                     NRGTMTLPLEMELVYQDDSTERVRLPVEMWNQGPRFGYRIRRGKAVKRVVVDPDQALP
                     DVDRSNNERTR"
     gene            4096..4890
                     /locus_tag="VFD73_03860"
     CDS             4096..4890
                     /locus_tag="VFD73_03860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73155.1"
                     /translation="MAAADSSSRADSSTAGTPATVVVTAADYRFSAPSTVPAGLVSID
                     LVNHGKEMHQAQIVKLEDGKTVADLEKALSSQGPPPSWIKFVGGANGVAPGGEAHAAS
                     VLTPGNYAFLCFIPSPDGKMHAAKGMVQPFTVAGGASAGASEAPHGDVTMKLTDYNFT
                     LSKPLTPGKHTILVENAGPQPHEVVLLKLAPGKKAEDFGKWAETMKGPPPAQPLGGVT
                     FLDKGAQGSFTADLTAGDYGLICFVPDAKDGKPHFVHGMIKTIKVG"
     gene            complement(4877..5437)
                     /locus_tag="VFD73_03865"
     CDS             complement(4877..5437)
                     /locus_tag="VFD73_03865"
                     /inference="COORDINATES: protein motif:HMM:NF012774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HZI73156.1"
                     /translation="MASPVFQSLIENTLLHGMLNRLIVPLLIILASACGSGLIGQQGP
                     AACTVSRVSDGDTFRCRDGRRVRLTGIDGPELEQQPFGLASRAALLRLLPPGITVRLE
                     TDVAPLDQYGRVLAYVWSGDTLINEVMLRNGWAVLYTVPPNIKYVERLARAQKEARAN
                     HAGLWSEGGFDCPPSQFRRNHCLSRP"
     gene            5431..6342
                     /locus_tag="VFD73_03870"
     CDS             5431..6342
                     /locus_tag="VFD73_03870"
                     /inference="COORDINATES: protein motif:HMM:TIGR01777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HZI73157.1"
                     /translation="MPRHLLVSGASGLIGTSLVQHLQANGHRVTRLVRRPAGKNEVSW
                     DPMGPHLDLSSLPRVDGVVNLAGENIATRWTSAARRRIHDSRVFGAQLLSRAIARLQP
                     RPEVMVSASAIGIYGDRGDQELTETSPVGDPARDFLVSVCLGWEAAAEEARQAGIRVV
                     HPRFGVVLGREGGALKKMLPAFRAGLGSRIGPGTQWMSWIALDETVEIIDHILGDRSL
                     AGPVNVTAPHPVRNAEFTSSLARALGRPAPLVVPGAALRLIFGDMGQSTLLASARVLP
                     ARLQQVGYQFRFPDLPGALQHLLEQPH"
     gene            6352..>7051
                     /gene="queC"
                     /locus_tag="VFD73_03875"
     CDS             6352..>7051
                     /gene="queC"
                     /locus_tag="VFD73_03875"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HZI73158.1"
                     /translation="MTRSKAVVLLSGGMDSATTAAIALEQGFDVHALSFRYGQRHVAE
                     LQAAGRVAASLGIRRHVVLDIDLRPFGGSALTGELPVPKDTPMDDIGQRIPVTYVPAR
                     NTIFLAFALGWAEVLGAADIFMGANAMDYSGYPDCRPEYIEAFERMAQLATRAGVEEG
                     RRIKIHTPLITLAKREIVERGRALGVDYSLTVTCYDPDGQGRACGHCEACLLRLKGFR
                     EAGIEDPAQYQQVSG"
BASE COUNT         1260 a         2232 c         2275 g         1284 t
ORIGIN      
        1 gcattgtatc acaattcatt aaggcaggtg caacggaagt attcacggta ccgtcccctt
       61 tcccccaccg gcacaaagat cgcattctcc ccggacacta gcccatcagt tcagatcgcg
      121 ttcagactgg ctcgtcagtg cgaggagagg acagcatgac tgcaacaagc gtcatgatcg
      181 gccggcgatt ttcccccgcc acacggcttc ggcttcagct ggtctttgcc cgggcggtgg
      241 aggcgttggc tgagacctat cagcaacagg cggcggagtt cgtgcggcgg ctcaagtcac
      301 ggctcacagt cgatgaggcg ctgcaacgct atttccgcga ggtcggcgtt cccgccacca
      361 tagaggagac ggtccgatcg cgggcgctga tctccctcgc cgggttgatc gagaatccgc
      421 cgaaaccgga aagccgggcg agcggctgga ccattctccg tcccgaccag ctgatcgagg
      481 cattgcgccg ccgggtgcag cacgtcgagg aaaccaacct cgactgccgg ctggctgcgt
      541 ccatgtcgga tgaagcggtg gccgccacgc acgtgcgcat ggcgctggag acggccgaag
      601 tgctggcgga ggaagtcacg cccgaccagg cgatcatgct ctacgtccgc accttcaatc
      661 taccgtccat cgatgcccag ggcgtgttcc gcacggccat gtcgcaatgg gccgagctgc
      721 acccgctccc tggcgagccc cacgcgctgc tgcagcagaa ggtcgccttc gaggcagaga
      781 cacaccccaa gctgggtctt ctgccgcgcc gcgagtttgg tctccgcgtc atggtctgag
      841 ccacccgagg gtcgccgctc cgttatcttt cggaggtgag agcgaggcgg ttccaatgag
      901 gtggtcctac cggataggag tcgtcgccgg caccgagatc aaggtgcacg tgacgttctt
      961 gctgatcgtc gcctggtggg cactcatcgg gtacaacgaa gctggtccat ccggagcgct
     1021 ggttcgggcg ctcgcgctgc ttgctctctt tgcctgcatc ctgctgcacg agttcggcca
     1081 cattctcatg gcgcgccgct tcggcgtacg caccccggac gtcatcctgc tccccattgg
     1141 cggtgttgcc cggctggagc gaattcccga cgagccgcga caggagctgc tgatcgcgat
     1201 cgcgggcccc gcggtcaccc tggtcatcgc tgttctcctc tgggcggtcc tccggttgac
     1261 cggcagtcac gccaacataa tgcagctgag tgagaacgag cctttcctgg cccaactggc
     1321 gaccgcaaat atctatctcc tgctcttcaa cctgatcccc gcctttccca tggacggggg
     1381 acgagtgttg cgcgcgctcc tggccagcag actcgggtta ctgcgcggca ctcgaatcgc
     1441 tgcaacgctg gggcagacgt ttgcagtgct gggcggcctc tatgggatca ccaagccgga
     1501 gcccatcctc atcctggtgg cgttctttgt tttcctgggc gccaatgcgg aggccacctc
     1561 ggtcgaaacc cggctggcgg gagagggcat ccaggtgcgg cagatgatgg tcaccgattt
     1621 ccgcaccatc ccgatccatg cgacgctcaa cgatgcagtc gcccttctgt tgagcggcga
     1681 gcagcgggaa tttccggtgg tcgacaatct gggtcgaacc gaaggaatcc ttacccgcga
     1741 caacctgatt cggggactct cgcttcgagg accgcaatcg acggtggcgg aggcgatgag
     1801 cgccggcgtg cccagcgtcc cttcgacgct gggctttcag gaagcgctcg accgcctgcg
     1861 gtccagcagg ctgccggccc tccctgtgat cgacggcggg gcactggtgg gactcttgac
     1921 cctggacaac atcaccgacc tgctgctggt ccggcgcgct cggggttagg aacgctagcg
     1981 ggtacgctcg ttgttgctgc ggtcgacgtc gggcagcgct tggtccggat ccaccaccac
     2041 tcgcttgacc gccttgcctc gtcgaattcg gtacccgaag cgcggcccct ggttccacat
     2101 ctccaccggt aggcgaaccc gctcggtcga atcgtcctgg tataccagct ccatctccag
     2161 cggaagcgtc atggtcccgc ggttggccag atagacccga tcggtgccga tcgagtcgac
     2221 tgcctggtcc agtcgtgccg tggtgtagat ccagtccctc caaaaccaat cgagatccat
     2281 cccggaggcg tcgcgcatca gccggaagaa atcagccggc gtcggatgct tgtacgccca
     2341 cgcgttgatg taatcccgaa aggctcggtc gaaccggtcc ttgcccaaaa cttcataccg
     2401 tagcgtttgc atcatgaggg caggcttctg gtatccagtc cagaagagat ccttgctctc
     2461 caccggccgg acgatgagcg gctgctctcg tcccggtatg gcgtggtcgt ggtacagatg
     2521 gagtggatgc acctcgatcg agtcgccgta cggtgtgccg gcgaagtagc gggcggcccc
     2581 gccgagatcg atgaaggtgt tgaagccctc gtccatccag ggatagaggc gctcgttgct
     2641 cccgaccacc atagggaacc actcgtggcc gaactcgtgc gagagcaccc actggagttc
     2701 ctcgcgcgag ggactattcg gaacgaaagt gagcatgggg tattccatgc cctcgatcgg
     2761 tccttcgaca gtcgtggcct gaggataggg atagcggtac cactgctcgc tgaagtactt
     2821 gatcgcctcc cgggccatgc ggttggcctc ggtccagcgg gttgcctgcg gacggtagaa
     2881 ggtctggatg aggatgccct ggtagtcgct ggcatcccag cgcagcaccg gcccggcggc
     2941 aaacgcgaag tcccgtacgc tgtccgcggt aaacttccag gtgagctcgc cggtgctgcg
     3001 gggacgggtg cgttccgaat tgccggcttc gtcctgggtc acgatcgcga ccggctgggt
     3061 ggaggtcctt gcaatggcaa gtcggttccg ctgagccggc gtgagcacct gctccgggtt
     3121 tcggagcgtg cccgtggccg ctacgaggta gccggcgggc aacgtcagag tgatgtcgaa
     3181 gctgccgtac tccaggtaga actcgccggc cccgatatag ggatcgtggt tccagccccg
     3241 aacgtcatcg tagaccgcca gacgcggata ccactgcgcg atctcataga gcgatccatc
     3301 ccgccccatc cggcccgctc cataatcggg aacggtgaac cgccagctca ccgagagatc
     3361 cagcgtccgc tctgaggcca gaggacgggg caggtccacc cgcatggtgg tgccgtagat
     3421 ctggggatgg agggcccgac cctcgacagt gatgcgctcc agagtcagac cgccattgaa
     3481 gcccttgcag gagaagtcga aggtcgagcc cagaaagacc agcggcggct ggtcgagctg
     3541 ctcggtgacc ccatgagggt cacagatgtt ctgctccaga aacatccaga ggtagggcag
     3601 cgcgtccggc gagttgttgg tgtagtgcac tgtctcgcgc ccctggagca cacgccgcgc
     3661 ggtatccagg gtggccacga tgcggtagtc ggcccgctgc tgccagtagg ctcggcccgg
     3721 tcggccggag ccggtccggt actcgttggg ggcggggaga gaaagggcgc ggaacaccga
     3781 cggtggagtg ggaagcgtgt ccccacccga atgactctgg gccgcggcgg agcgctgcag
     3841 cagtgcccac gcgatgagcc aaccggcggc acggaggttc atggcgacaa catactaccg
     3901 gaaggacgtc gggcaaggcg cgtcggccct ctggcgcaga aacccgatca gtcgcatttt
     3961 ggcggcgctc tctattcacc cccttcagga gacagtatgt cccgtgcttt tgcccgctca
     4021 tgtctcggtt tgatcgttgt tgcaactgtg gccggctgta agtccgaccg tcgctcagga
     4081 gacggcggag cgaccgtggc agcagcagat tcctcgagtc gagccgattc ctccacagcg
     4141 ggcaccccgg ctaccgtcgt ggtgacggcc gccgattacc gtttcagtgc accgagcacc
     4201 gtgcccgcag gtctggtctc gatcgatctg gtcaaccatg ggaaggagat gcaccaggcg
     4261 cagatcgtca aactggaaga cggtaagacc gtcgccgatc tggagaaggc gctgtccagt
     4321 caaggccccc cgccctcctg gatcaagttc gtgggaggag ccaacggggt cgcgcccggc
     4381 ggcgaggccc atgcggcctc ggttctcaca cccggcaact acgccttcct ctgcttcatt
     4441 ccaagccctg atggcaagat gcacgcagcc aagggcatgg ttcagccctt cacggttgct
     4501 ggcggcgcct ctgccggagc gtcagaagct cctcacggag acgtcacgat gaagctgacc
     4561 gactacaact tcactctctc gaagccgctc acccccggca agcacaccat cctggtggag
     4621 aacgccggac cgcagccgca cgaggtcgtg ctgctcaagc tggcgccggg caaaaaggcc
     4681 gaagatttcg gtaaatgggc ggagacgatg aaaggcccgc ctccggccca gccgttgggc
     4741 ggagtgacct tcctcgataa gggagcgcag ggctccttta ccgccgatct cactgcggga
     4801 gactacggcc tgatctgctt cgttcccgac gcgaaagacg gcaaacccca cttcgtccac
     4861 gggatgataa agacgatcaa ggtcggctga ggcagtgatt ccggcggaat tgactgggag
     4921 gacagtcgaa cccgccctcg gaccagaggc ccgcgtgatt ggcgcgggcc tccttttgtg
     4981 cccgggccag ccgctcgaca tacttgatgt tgggcggcac cgtatacagc acggcccagc
     5041 cgttccgcag cataacctcg tttatgaggg tgtccccgct ccacacgtac gccagcaccc
     5101 ggccatactg atccaggggc gcaacatcgg tctccagcct gacggtgatt ccgggaggaa
     5161 gcagacggag cagcgccgca cgggaggcca agccgaacgg ctgttgctcg agttcgggac
     5221 cgtcgatgcc ggtcagccgg accctccggc cgtcgcgaca ccggaacgtg tcgccgtcgg
     5281 acacgcggct cacggtacag gctgccggcc cctgctggcc gatcaatccc gacccgcagg
     5341 cgctcgccag aatgatgagc agtgggacga tgagccgatt gagcattccg tgcagcaatg
     5401 tattctcgat caagctttgg aataccggtg atgccacgtc acctgctggt gagcggcgcc
     5461 agtggcttga ttggcacttc cctcgtccaa catctccaag ccaacggaca tcgggtcacc
     5521 aggctggtcc gccggcctgc tgggaagaac gaggtctcct gggatcctat gggaccgcac
     5581 ctcgatcttt cttctctgcc cagggtcgac ggggtggtca atctggccgg agagaatatc
     5641 gccacccgct ggacctcggc tgcacgaagg agaatccacg acagcagagt gtttggcgca
     5701 cagctgctca gtagagcgat tgcccggctg cagcccaggc cagaggtcat ggtgtctgcc
     5761 tcggccatcg ggatatacgg agatcgcggc gaccaggaac tcacggaaac tagccccgtc
     5821 ggcgatccgg ctcgggattt cctggtgtcg gtctgtctcg ggtgggaggc tgcggcagag
     5881 gaggctcggc aagccgggat ccgcgtggtg cacccgcggt ttggcgtggt gctgggccgt
     5941 gagggtggag cgctcaagaa aatgctgccg gcgttccgag ctgggcttgg aagcagaatc
     6001 gggccaggta ctcagtggat gagttggatt gccctcgacg agaccgtgga gatcatcgac
     6061 cacatcctgg gagatcgtag cctggcgggt ccggtaaacg tcaccgcccc tcatcccgtc
     6121 cggaatgcgg agttcaccag cagtctcgcc cgcgccctgg ggagaccggc gccgctggtc
     6181 gttcccggtg cggcgctccg actcatcttc ggcgacatgg gccagagcac gctgctcgcc
     6241 agcgcccggg tcttgcctgc caggctccaa caggtgggtt accagttccg atttcctgat
     6301 cttccgggag cgctccagca tcttctcgaa caaccgcact aggtttgcac ggtgaccaga
     6361 tccaaagcgg tggtcctctt gagcggcgga atggactccg caaccaccgc ggccattgct
     6421 ctcgagcagg ggttcgacgt ccatgccctc agctttcgct acgggcagcg gcatgtggcg
     6481 gagctccagg cggcgggtcg cgtcgcagcg agcctcggca tacgccggca tgtcgtgctc
     6541 gatatagacc ttcgaccgtt cggcggctcc gctctgactg gcgaactgcc ggttcccaaa
     6601 gacacgccga tggacgacat cggtcagcgg attccggtga cgtacgttcc cgcccggaac
     6661 acgatatttt tggcgtttgc gcttggctgg gccgaagtcc tgggcgcagc cgacattttc
     6721 atgggcgcca acgccatgga ctacagcgga tacccggact gtcgtccgga gtacatcgag
     6781 gcgttcgagc gcatggcaca gttggcaact cgcgccggcg tcgaggaagg ccggcggatc
     6841 aaaatccaca caccgctgat cacgctggcc aaacgcgaga tcgtggagcg gggccgagcg
     6901 ctgggcgtag attacagtct gacggtcacc tgctacgatc ctgacgggca aggacgcgcg
     6961 tgtggccact gcgaggcatg tctgcttcgg ctgaaagggt ttcgggaggc gggaatcgaa
     7021 gatccggccc agtatcagca ggtaagcggt g
//
LOCUS       DASRPQ010000331         3387 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_34953, whole genome shotgun sequence.
ACCESSION   DASRPQ010000331 DASRPQ010000000
VERSION     DASRPQ010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3387
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34953"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(691..764)
                     /locus_tag="VFD73_03880"
     tRNA            complement(691..764)
                     /locus_tag="VFD73_03880"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(728..730),aa:Pro,seq:tgg)
     gene            complement(832..1452)
                     /locus_tag="VFD73_03885"
     CDS             complement(832..1452)
                     /locus_tag="VFD73_03885"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009146 - purine nucleoside triphosphate
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP pyrophosphatase"
                     /protein_id="HZI73159.1"
                     /translation="MKLLAATRSPGKQEEIRRILTPAGLEVVFPDDVGLWETSAEDAL
                     ELGETFEANARRKAEHFARLSGLPTFADDSGLEVMALGGAPGVKSKRWAGASGSAGQV
                     DAANNAELLRRLAGAPQRQRAARYRCVLVYLARSGAIPVVSQGDCIGRILEAPQGSAG
                     FGYDPLFFSQELGKSFGEATPEEKDSVSHRGRALRALVRSLARVSP"
     gene            complement(1449..2159)
                     /gene="rph"
                     /locus_tag="VFD73_03890"
     CDS             complement(1449..2159)
                     /gene="rph"
                     /locus_tag="VFD73_03890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004549 - tRNA-specific ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HZI73160.1"
                     /translation="MPRPDGRTNDQLRPLALERRANPYAEGSCLIRMGGTLVHCTASV
                     EPGVPAFKKGSGEGWVTAEYAMLPRATVERTSRERNGPGGRTQEIQRLIGRSLRAAMG
                     TLSFGEFTIRIDCDVLQADGGTRTAAITGGCVALADACEWLAQRTGQASPFRRLVSAI
                     SVGVIDDEVRLDLAYAEDKDAGVDANIVMAEPEDFVEVQGTGEHSTFSRDQLDTLVDL
                     AGRGIRELFRAQKQVLGW"
     gene            complement(2146..2631)
                     /locus_tag="VFD73_03895"
     CDS             complement(2146..2631)
                     /locus_tag="VFD73_03895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyltransferase/cytidyltransferase family
                     protein"
                     /protein_id="HZI73161.1"
                     /translation="MRVLDTTTKLRALPDAVVWRGRQEGPLVFTNGVFDLIHPGHVEL
                     LEAARREGAALVVAVNSDASARRLEKGPGRPVNPAAARARILAGFAAVDCVVLFDEDT
                     PLELIQKLCPDVLVKGADYPPDSIVGADWMEARGGRLVRVPIVTGYSTTSMVERLRAS
                     T"
     gene            complement(2628..>3387)
                     /locus_tag="VFD73_03900"
     CDS             complement(2628..>3387)
                     /locus_tag="VFD73_03900"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HZI73162.1"
                     /translation="QKMHTPEARIIIGAAVIDDVLGLVILAVVSGLAAGVSVGALAVL
                     RILGLAVGFLVLAVLVGRYAAPRLFDLVVRMRVRYVLLVFAMAFVLGLSGVAALVGSA
                     LIIGSFAAGLILSGIDQFDTIEREVRPIVSVFAPIFFVSVGASVNVRLLDPSHAGTRS
                     ILGVAAVLTVLAVVGKLAAGWAAPWVRFRRLVVGVGMVPRGEVGLIFADIGRRAGILN
                     EAIFGAILLMIMATTFVAPPGLKLLFGARPEADE"
BASE COUNT          688 a         1134 c          984 g          581 t
ORIGIN      
        1 atgacgcggc gggatccaca gggtcgctgc aacgctaatg tccgcagcgc tggcagcgtt
       61 gcattggtat tgtctgtgga atgcacttac atgtctctcg agagaagctg aggaggcgag
      121 gtgtcagaca aggtctgcgc agtgaaccac atcgtagcgc ttagtagagc agacggagga
      181 gacggggatc gaaccgctct ccttgtgaga tgttcttttg aacatatgca gtggacgcga
      241 agagtctgta gtccatggct gagtagatgc tcaggcgagg cgtaacgacg cgtagagcgc
      301 ttcgtagaaa aatgcccagg cgctccatgg tctcgtggtg aaacgaccag gcgcacctcc
      361 gaacctcaaa aaaatatgtt gcgcatttct cgaaaggatc cgcattactt ccctggccca
      421 tggggggtca ggcacctgcg ccaaccccag gagctgaggt ctagaccgtg gctgggaata
      481 gcaccatcca ctatgcccgc gtgccctcgg cgtctgactt cgacctcttc gcctacctag
      541 tattcagtca cctccacaca tgatcagtct taaccagacc tgcccaacac ccttactacg
      601 aggtcggttg tgtgacgttt actgcccatg tcatgaaacc tgcgaagccc gctaggttcc
      661 aaaaggtggc aggagtgtaa gttagtgaag tcggggcgcc gggatttgaa cccgggacct
      721 cctgctccca aagcaggcgc gctaccggac tgcgccacac cccgtaaagt cagccgcaaa
      781 atagccgctg tcagaaaagc caggtagcac tggtttcccc gtggctctgc gtcatgggga
      841 cactcgagcc aggctcctga ccagagcccg caacgctcgt ccccggtggc tcacactatc
      901 cttctcctcc ggggtggctt caccgaaact cttgccgagc tcctggctga agaacagagg
      961 gtcgtagccg aaccccgccg acccttgcgg tgcctccaaa atccggccga tgcaatctcc
     1021 ctggctcacg acgggaatcg cgccgctcct ggccaagtag acgagcacac agcggtatct
     1081 cgctgcccgc tggcgctgcg gggctccagc cagcctccgg agcaactcag cgttgttggc
     1141 cgcgtcgacc tgcccggcgc tgcccgaggc tcctgcccac cgtttggact tcacgcctgg
     1201 ggcgccaccc agagccatga cctccaatcc cgagtcatcg gcgaacgtcg gaagcccact
     1261 gagccgcgca aaatgctcgg ctttgcggcg ggcgttggct tcgaaggtct cgcccagctc
     1321 caacgcatcc tcggccgagg tctcccaaag tccgacatcg tccgggaaaa caacctcgag
     1381 acctgcgggg gtcagtattc tacggatctc ttcctgttta cccgggctgc gcgttgccgc
     1441 cagcagcttc accagccgag gacctgtttt tgggcccgaa acaactctct gatcccgcgg
     1501 ccggccaagt cgaccaaggt atcgagctga tcccgcgaga acgttgaatg ctcccccgtc
     1561 ccctgtacct ccacaaaatc ctcgggctcg gccatgacga tattcgcgtc gactccggcg
     1621 tccttgtctt cggcataagc cagatccaat cgcacctcgt catctatgac cccgaccgag
     1681 atcgctgaga ccaatcggcg gaacggcgac gcctgcccgg tgcgttgggc cagccactca
     1741 caggcatccg ccagcgccac acagccaccg gtgatcgccg ccgtacgagt acctccgtcg
     1801 gcttgcagca catcgcaatc gattcgtatg gtgaattcgc cgaagctcaa ggtgcccatt
     1861 gccgcccgga gggaccggcc gatgagcctt tggatctcct gggtccggcc accgggcccg
     1921 tttcgctcac gcgacgtgcg ctcgaccgtg gcccggggga gcattgcata ctcggccgta
     1981 acccagcctt ccccactccc cttcttgaag gcggggacac caggctctac gctcgcggtg
     2041 cagtgcacca aagtgccccc cattcgaatg aggcaactgc cttccgcgta gggattggcc
     2101 cggcgctcca gcgccagtgg tcttagttga tcgttggtgc ggccgtcagg tcgaggcacg
     2161 gagtcgttcc accattgatg tagttgaata gccggtaacg atgggcactc ggaccagccg
     2221 tccgcccctg gcttccatcc aatcggcgcc gacgatggag tcgggaggat agtctgcccc
     2281 cttcacgagg acgtcggggc aaagcttctg gatcagctcc agcggagtat cctcatcgaa
     2341 gagcactacg cagtccaccg ctgcaaagcc ggcgagtatc ctggcccggg cagccgcagg
     2401 attgaccggt cgtccggggc ccttctccaa gcgtcgagcc gaagcatcgc tgttcaccgc
     2461 aaccaccagg gcggcaccct cgcgtctggc ggcctcgagc aattccacat gcccggggtg
     2521 gatcagatcg aacacgccgt tggtgaacac cagcgggccc tcttgtcggc cacgccagac
     2581 cactgcgtcg gggagagccc ggagcttggt cgtcgtgtcg agcaccctca ttcgtccgcc
     2641 tccgggcgag cgccgaagag gagcttgagg ccgggcggag ccacaaacgt ggtcgccatg
     2701 atcataagca ggatagcgcc aaagattgcc tcattgagga tccctgcccg ccggccgatg
     2761 tcggcaaaga tgagccccac ttcgcctcgg ggcaccatgc cgacccccac caccaggcgc
     2821 cgaaaccgta cccagggagc agcccagccg gcggccaact ttcccaccac cgccagcacc
     2881 gtcagaacgg cggcaacccc gaggatacta cgggtgccgg cgtgactggg atcgagcagc
     2941 cgaacgttta ccgatgcgcc gacactcacg aagaatatgg gagcaaagac cgacacgatg
     3001 ggtcggacct cccgttcaat agtgtcgaac tggtcgatgc cggacagaat cagcccggcg
     3061 gcaaacgagc caatgatcaa cgccgacccc accagcgctg ctacgcccga gagtcccagc
     3121 acgaaagcca ttgcaaagac caggagcacg taacggaccc gcatgcgcac gacgaggtcg
     3181 aacagtcgcg gggccgcata ccggccgacc agcaccgcca gaaccagaaa tccgacggcc
     3241 agccccagga tcctaagcac ggcgagcgca cccaccgaca ctccggctgc caggccggaa
     3301 acgacggcga gaatgaccag cccgagcaca tcgtcgatga ccgctgcgcc gatgatgatt
     3361 cgggcttccg gggtgtgcat cttctga
//
LOCUS       DASRPQ010000332         1627 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_351561, whole genome shotgun sequence.
ACCESSION   DASRPQ010000332 DASRPQ010000000
VERSION     DASRPQ010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_351561"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1124)
                     /locus_tag="VFD73_03905"
     CDS             complement(<1..1124)
                     /locus_tag="VFD73_03905"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI73163.1"
                     /translation="MADAIRDLLFGGVIPGRELVEAVEPRRSFDDVVLPATTMRALNH
                     ALALVRKHDLIFHQWGLSERHSTGLGLAFHFAGPPGTGKTVCAEALAYSLNKKLLVVR
                     YAELESRWVGQTAKHVATVFRSAARQDAVLFFDEADAIAGRRFTSVSAAYEREANAIV
                     NVLLHELETFPGVVIFATNLAANIDPAFERRIRTHILFDMPNVEERERIWRVQLHARK
                     TPLAEDVDFAALAEAYPRSGGDIKNAVLKAAQIATVEPGPDADKRIHQRHFIQGMEEV
                     IAAESVMSQSLFESGPIADRWGEAHEELRGELGLLAERFDGLERTLRKLAAEQSSGRA
                     ELEAEQTRLLEALATKHQRTERILTAGIVAALVIALAAVLV"
     gene            complement(1158..1526)
                     /locus_tag="VFD73_03910"
     CDS             complement(1158..1526)
                     /locus_tag="VFD73_03910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73164.1"
                     /translation="MSDPNTFDRVSPVDPAAWQASWETEDNYWHENFTSRPYALGPDY
                     YDQFRPAYRYGFESAQHHLGRNWDDAETDLRSGWDNYPHRGATSSTWEEIKDAVRDAW
                     DRVVSGGKHERDRKDEEARE"
BASE COUNT          281 a          530 c          514 g          302 t
ORIGIN      
        1 accaacacgg cagcgagggc aatcaccagc gcagccacga tgccggccgt aaggatgcgc
       61 tcggtgcgct ggtgtttggt ggccagcgcc tcgagcagcc gggtctgttc cgcctccagc
      121 tcagcgcgtc cggaagattg ctcggcagca agcttccgca atgtgcgctc cagaccatcg
      181 aagcgctcgg cgagcagccc cagctctccc cgcaattcct cgtgggcttc gccccagcga
      241 tcggcgatgg gacccgactc gaacagcgat tgcgacatga ctgattctgc cgcgatcacc
      301 tcttccatgc cctgaatgaa atggcgttga tggatacgct tgtccgcgtc cggcccgggc
      361 tcgaccgtcg cgatctgggc ggctttcagg actgcgttct tgatgtctcc gccgctccgc
      421 ggataggcct cggccagagc cgcaaagtcc acgtcctcgg ctagcggagt tttcctcgcg
      481 tgcagctgta cccgccagat ccgctctcgc tcctcaacgt tcggcatatc gaagaggatg
      541 tgggtgcgaa tcctccgctc gaaggccgga tcgatgttgg cggcgagatt ggtggcgaag
      601 atgaccactc ccggaaatgt ttccagctcg tggagcagca cgttaacgat ggcgttggcc
      661 tcgcgctcgt aggccgcgct caccgaggtg aagcggcgac cggcgatggc atccgcctcg
      721 tcgaagaaca gcaccgcatc ctggcgggca gcggagcgga acaccgtcgc cacgtgtttg
      781 gcggtctgcc ccacccagcg cgactccagc tcggcgtagc ggaccaccag cagctttttg
      841 ttgagggaat aggcaagggc ctcggcgcag accgtcttgc cggtacccgg gggcccggcg
      901 aagtgaaagg cgagtcccag gccggtggaa tgccgctcgg ataaccccca ctgatgaaag
      961 atcaggtcgt gcttccgcac cagagcgagc gcatggttca gcgcccgcat cgtggtggcg
     1021 ggaagcacca cgtcgtcaaa cgaacgccgc ggctcgacag cttcgacgag ctcgcggccg
     1081 ggaatgactc ctccgaagag gagatcgcga atcgcgtcgg ccattgattc ctgttgttac
     1141 cggtcctcca attatagcta ctcgcgagcc tcctcgtcct tccgatcccg ctcgtgcttc
     1201 cctccgctca cgacccgatc ccaggcgtcg cgcaccgcat ccttgatctc ctcccaggtg
     1261 gaggatgtcg ccccgcggtg cgggtagttg tcccagccgc tccggaggtc ggtctcggcg
     1321 tcatcccagt tccgacccag atggtgctga gccgattcaa agccgtaccg gtatgccgga
     1381 cggaactggt cgtagtagtc gggacccagt gcgtacggcc ggctggtgaa gttctcgtgc
     1441 cagtagttgt cctccgtctc ccaggacgcc tgccaggcag cggggtcgac cggtgacacg
     1501 cggtcaaagg tattcggatc ggacatggag tgtctccctg aaggtgaacc gtacaatctt
     1561 gcgtggcctc ccagggtaac acttggggcg cgcgaggcgg gtgagcgaca tcacgaacct
     1621 ttgccgg
//
LOCUS       DASRPQ010000333         1618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1602735, whole genome shotgun sequence.
ACCESSION   DASRPQ010000333 DASRPQ010000000
VERSION     DASRPQ010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1602735"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..431)
                     /locus_tag="VFD73_03915"
     CDS             complement(<1..431)
                     /locus_tag="VFD73_03915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HZI73165.1"
                     /translation="MIRNLAIIAHVDHGKTTLVDQMLRQAGAFRANQQVEERVMDSNP
                     LERERGITILAKNTAVRWKGTKINIVDTPGHADFGGEVERILRMVDGVLILVDAAEGP
                     MPQTRFVTRKALALGLRPIVAINKIDRADAEPLRVHDEVLGL"
     gene            complement(547..1533)
                     /locus_tag="VFD73_03920"
     CDS             complement(547..1533)
                     /locus_tag="VFD73_03920"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HZI73166.1"
                     /translation="MGESGLSAQAAATRLRADCTSLQSRSPGAPLRRLSAVLALTMTF
                     MVVEAIGGWLSGSLALLADAGHMLTDAGALGLSLLSAWIALRPANDTKTYGYHRWEIL
                     AALINGAALFGIAAWVIVEAVHRMRHPEAIRADLFLAVAAAGLVVNLVSLKILHGIRH
                     GSLNTRGAYLHVMGDALGSIGALAAAAIILLTGWTLADPIISVVIALLILAGAWRLIR
                     ESTDVLLEAVPGHVSMAEVQRRILNVAGVAAVHDLHVWTVNSGIVAMSGHAIAPELPS
                     HPRVLEAIRLEMARLGIGHVTIQLEVQHECEEPREVAGISTLSHQHHPGHKH"
BASE COUNT          291 a          512 c          525 g          290 t
ORIGIN      
        1 agtcccagca cctcgtcgtg cacccgcaat ggttcggcgt ccgcccggtc aattttgttg
       61 atggcgacaa tcggcctgag gccgagggcc agcgccttcc gggtgacgaa acgggtttgc
      121 ggcatcggac cttcggcggc atcgaccagg atcagcacgc cgtcgaccat gcgcaggatg
      181 cgctcgactt cgccgccaaa gtcggcgtgg cctggagtgt ccacgatgtt gatcttggtt
      241 cccttccatc gcaccgctgt gttcttggcc agaatcgtga tgccccgctc ccgctccagc
      301 gggttggagt ccatcacgcg ctcttcgacc tgctggttgg cacgaaatgc tcctgcctga
      361 cggagcattt gatccaccag tgtggtcttg ccatgatcga catgggcgat gatcgccaag
      421 ttccgaatca atctgcgctt ccggccaagg atctaacggc ggaggcccgg acgcccgggc
      481 ctccgcggcg catatatagg tggagcattg ggatgccgca agagagcttg gaagggggga
      541 actgccctag tgcttgtgtc cgggatggtg ctggtgggac agggtggaga tgccggcgac
      601 ctccctcggc tcctcgcact cgtgctggac ctcgagctgg atggtcacgt gaccgatgcc
      661 cagcctggcc atctcgagcc ttatggcttc cagaaccctt ggatgtgagg gcagttccgg
      721 agcgatggcg tggccgctca tcgcgactat cccgctgttc accgtccaga catggaggtc
      781 gtgcactgcc gcaaccccgg caacgttcag gatccggcgc tggacctcgg ccatcgagac
      841 gtgacccggc actgcctcga ggagcacgtc ggtgctctcc cggatgagcc gccatgctcc
      901 cgccagaatc agcagggcga tgacaaccga gatgatcgga tcggccaggg tccagccggt
      961 gagcaggatg atggcggcag cggccagcgc gccgatggag cccagtgcgt cgcccatgac
     1021 gtgaaggtag gcgccgcggg tattgaggct tccatgccgg atgccgtgga gaattttgag
     1081 gctcaccaga ttcaccacca gaccggcggc tgcgaccgcg agaaacaggt cggctcggat
     1141 ggcctcgggg tgtcgcatcc gatgcactgc ttccacgatc acccaggccg ctatcccgaa
     1201 gagtgccgca ccgttgatca acgcggccag gatctcccac cggtggtagc cgtaagtctt
     1261 ggtgtcgttg gccggtcgga gtgcgatcca ggcgctgaga agcgaaagcc ccagcgctcc
     1321 ggcgtcggtc agcatatgac cggcgtcggc cagcagggca agggagccgc tcagccaccc
     1381 accaatcgct tcgaccacca tgaacgtcat ggtgagcgca agaacggcgc tcagccggcg
     1441 gagcggcgca ccggggctcc gcgactgcag cgatgtgcag tcggctcgca gccttgtggc
     1501 ggcggcctgc gccgagagac cagattcacc catgcctgaa atttagtaga agaccgggtc
     1561 ctcgcacgat gcttcccccg cgattacgct tgagccatat gcaagaatca cagccagg
//
LOCUS       DASRPQ010000334         1259 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2556339, whole genome shotgun sequence.
ACCESSION   DASRPQ010000334 DASRPQ010000000
VERSION     DASRPQ010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1259
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2556339"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..225
                     /locus_tag="VFD73_03925"
     CDS             <1..225
                     /locus_tag="VFD73_03925"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HZI73167.1"
                     /translation="LKQQGDGHLVIYGYGQLAQTLLEHGLVDKLNFVINPVMAGSGTT
                     LFRPGKRTNLRLVSATERRNGVVTLSYANA"
     gene            complement(331..738)
                     /locus_tag="VFD73_03930"
     CDS             complement(331..738)
                     /locus_tag="VFD73_03930"
                     /inference="COORDINATES: protein motif:HMM:NF037170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZI73168.1"
                     /translation="MVAGVLLHAAGVIGRYEKTVIDCPDPRALAKFYCQVLGMRVNED
                     VDGWVVIGSEPGLRELAFQRATEWVPPRWPDPAHPQQLHLDIRVDDPDQAEQKLRALG
                     ATRVPGKPETGFRVFIDPVGHPFCIVFGRHSAG"
BASE COUNT          241 a          399 c          403 g          216 t
ORIGIN      
        1 ctcaagcagc agggggacgg gcacctggtg atctacggct acggccagct cgcccagacg
       61 ctgctcgagc acggcctagt cgacaagctg aacttcgtca tcaacccggt catggcgggc
      121 agcgggacca cgctgttccg ccccggtaag cgcacgaacc tgcgcctagt ctccgccacc
      181 gagcgccgca acggcgtggt caccttgtcc tacgcaaacg cctgaaggac gccgagcgga
      241 gcagacgtag cctgatggat actagctatc gcaagatccc gcaaggtcag gcaaggaata
      301 acccgatctg cggcatatgc gggcgacggt tcagcctgcg ctgtggcgac cgaagacgat
      361 gcagaatggg tgcccgacgg ggtcgatgaa gacccggaac cctgtctcag gcttacctgg
      421 cacgcgagtg gcgccaagcg cccggagctt ctgctcggct tgatccgggt catccacgcg
      481 aatgtcgaga tgtagttgct ggggatgcgc tggatcaggc cagcgcggcg ggacccattc
      541 ggtggcccgc tggaaagcca gctcacgaag accaggctct gagccgatga cgacccagcc
      601 gtcgacgtcc tcgttgactc gcattcccag cacctggcag tagaacttcg cgagagcgcg
      661 agggtcgggg cagtcgatca ctgtcttctc gtagcgtccg atcacaccag cagcatgcag
      721 taaaacgccg gccaccactt ccgctcacct gcagcgccac gcacctgtcg cactcagagc
      781 ggcgattgag gacgtgacct caagcgcggc gatgtataaa tatacggctg gttgacgtcg
      841 tagccaggac tggcgagggc ggtcgacggc acgaagattg cctgataaca gcgcgccgac
      901 ccgccgttcg gcgcggtagc cgggatctcg gtttgcagcc gctgaggcgc gctgaacggg
      961 atgttcggtg ccctccgggc atggccgtgg gaaatacccg gccatattgc atctggggat
     1021 agtgatcgcc atagcgtttg cgcaggtacg ccggactctt gaacccggcc gctcgctgga
     1081 ctcatgatcc gccgctctgc cagttattcg aggttatgac gcagcgtcgg cagtgccgaa
     1141 cctgccactt gggccctcga aacgaaggcg aagaggccgc ttacactgcc gaatctggcc
     1201 ggtttgtaat caaggcggct ccgctgcgcc tggctccact cgcggcgggc tctggcctt
//
LOCUS       DASRPQ010000335         1040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_35524, whole genome shotgun sequence.
ACCESSION   DASRPQ010000335 DASRPQ010000000
VERSION     DASRPQ010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35524"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..233)
                     /locus_tag="VFD73_03935"
     CDS             complement(<1..233)
                     /locus_tag="VFD73_03935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73169.1"
                     /translation="MNEGQVPGSALAPHQVAIRLQGQVSDGITWARRRKAKFRRSASG
                     IRILSLVLAVASTIILGLQQLNFWTGLAFSFVAV"
BASE COUNT          184 a          320 c          349 g          187 t
ORIGIN      
        1 acggccacaa aggagaatgc cagaccggtc cagaagttca gctgctgcag gccgaggatg
       61 atggtggacg caaccgccag gaccaggctc aaaatccgga tacccgaggc tgacctgcgg
      121 aatttcgcct tacggcgccg ggcccacgtg atgccgtcgg agacctggcc ctgcagccgt
      181 atcgccacct ggtggggcgc tagagcgctc cccggaacct gcccctcatt catgccccat
      241 tctgacgcct gatcgctatg cgctgagcta ctcgatgctc atctcctgcc aagtctcatc
      301 tgaccgggcg ccgacctgga tcgcgttcgc ttcggccgcc gtgtccatcg cgtttccgcg
      361 gaagcgcttt gtgcaggctt tcacaagccg tagcggaaac gctcatgccg cggacagggt
      421 cgagcaccgc aggcctggcg cgagactagg ccatgcccgg gagcagtcga cagccgcggt
      481 ctctgctact ggaggacgga agctgacggg gaagcctgcc acggagagca acctgagtct
      541 ttgcgcaccc gcgcaaagag tcgccgttcg gagcgacttc caggcgtttg ctctcatccg
      601 gtgcggccat ccataacgat ctttctgccg cctgctggtg gaggggaagg gacggcagac
      661 ggcggtgctg ttgatgacgt ggccgaaagc ggatcgaatg taagtcgccc gccgagcgct
      721 gcgggcctgt cggccaggtt ctggtgggca ggcccctttg ggtgtcgcgt cgcagccggc
      781 ctggcgcggg cccagtgaag cacagggttc cgttctgggc cctaaggaag gtgtggcacc
      841 aggaagcatg aatggccctc ctttgccacc ggctgggcac tgggaaatcg aggcaatgca
      901 gcgcgccacg ggcttgccga ggtggaagca gctgctctaa atgtgtatct gaaccaccgc
      961 tcgccactcc gttacaatga gcgagggggt gagggacggc atgaattcgt ggctcgtctg
     1021 gggcggattt gcgctcgctg
//
LOCUS       DASRPQ010000336         1053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2229191, whole genome shotgun sequence.
ACCESSION   DASRPQ010000336 DASRPQ010000000
VERSION     DASRPQ010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2229191"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..708
                     /locus_tag="VFD73_03940"
     CDS             <1..708
                     /locus_tag="VFD73_03940"
                     /inference="COORDINATES: protein motif:HMM:NF014049.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF92 domain-containing protein"
                     /protein_id="HZI73170.1"
                     /translation="TGGGIAGVLIGTLILLGAGWQGGAVLAAFFVSSSLVSSITSRRS
                     PAGVLDAKGNRRDAWQVLANGGAAAVAAVIAGPHSLLSIWLVSASLAAAAADTWATSI
                     GLLSPTPPRLLWNNRPVPAGTSGGVTMAGVAGGLIGAGIVGLTAALVTGRSRLALGAM
                     LVGFAGMLMDSLLGGTLQGRFYCLHCGQDSEWKQHRCGCKTEFRGGLAWLNNDAVNGL
                     ATTLAALLAWALWYQLD"
     gene            701..>1053
                     /locus_tag="VFD73_03945"
     CDS             701..>1053
                     /locus_tag="VFD73_03945"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HZI73171.1"
                     /translation="MTDFPREVDVLIAGAGPAGSAVAGLLADNGLSVLAVDRAAFPRD
                     KPCSEYMSPEAVRILSRLGALDALEQAGAALPRGTKVIASKGASLHGVFDRASHQPYR
                     PTGLAISRRVLDQELL"
BASE COUNT          152 a          327 c          376 g          198 t
ORIGIN      
        1 accggcggcg gcatcgcagg agtcctgatc ggaacgttga ttctgttggg cgcagggtgg
       61 cagggcggcg cggtcctcgc cgcctttttc gtctccagca gtctggtctc cagcatcaca
      121 tcgaggcgat ctccggcagg agttctggat gccaagggca accggcggga tgcctggcag
      181 gtgctcgcca atgggggtgc cgcggcggtc gcagcggtga tagccggccc gcactcgctg
      241 ctcagcatct ggctggtgtc ggcgagcctg gcggcggcag ctgccgacac ctgggccact
      301 tcgatcggac tgctcagtcc cacgccgccc cgactcctct ggaataatcg cccggtgccg
      361 gctggtacaa gcggaggggt gacgatggct ggcgtcgccg gaggactcat cggtgccggc
      421 atcgtgggtt tgaccgcggc cttggtgacc gggcgctctc ggctcgccct cggagcaatg
      481 ctggtaggtt tcgcagggat gctgatggac tcgctgctcg ggggaaccct gcagggacgc
      541 ttctattgtc tccattgcgg gcaggacagt gagtggaagc agcaccgctg cgggtgtaag
      601 acggagttcc ggggaggatt ggcatggctc aacaacgacg cggtgaacgg ccttgcaacc
      661 acccttgcgg cgctgctcgc atgggcgctg tggtaccagc ttgactgact tcccgcgcga
      721 agtggacgtt ctcatcgccg gcgccggtcc ggcagggagc gctgtcgccg ggctcctggc
      781 ggacaacggg ctttccgtgc tcgcggttga ccgggccgcg ttccctcgcg acaaaccttg
      841 ttccgaatac atgagtccgg aggcggttcg cattctgagc cggctgggtg ctctggatgc
      901 gctggagcag gcgggagcgg ccctcccccg aggcaccaag gtgattgcct cgaagggggc
      961 cagccttcat ggagtgttcg atcgcgccag ccaccagccg tatcgtccca ccggcctcgc
     1021 gatctctcgg cgggttctgg atcaggaact gct
//
LOCUS       DASRPQ010000337         1437 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_35598, whole genome shotgun sequence.
ACCESSION   DASRPQ010000337 DASRPQ010000000
VERSION     DASRPQ010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1437
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35598"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..617
                     /locus_tag="VFD73_03950"
     CDS             <1..617
                     /locus_tag="VFD73_03950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73172.1"
                     /translation="ERGGFLFAMCTATETLDLALAADGVDIAAAYSDGTPMDPNASAK
                     MKWDRALAFHNAQLELSPTIPVYSDIDGHQVNSPERRQPLGSFTLFNFSAKIDPVATM
                     LVQNHRQVIPDFYGLTTSFTRKTLKPSVTVLAEEPGAPWVKYIHGEHGQGTWTFFGGH
                     DPEDPQHQIGDVLTDLSLHPHSPGYRLILNNVLFPAAKKKELKT"
     gene            614..>1437
                     /locus_tag="VFD73_03955"
     CDS             614..>1437
                     /locus_tag="VFD73_03955"
                     /inference="COORDINATES: protein motif:HMM:NF015935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="JAB domain-containing protein"
                     /protein_id="HZI73173.1"
                     /translation="MSERLAPGVRAYLAAEISAAGGREVSFFGDVDRDGVVTGARVAA
                     RGTVEMVLALPGGARRGQMLLHNHPSGVLEPSVADLNVAAQLHDAGVGFGILNNSATE
                     LYVVVEVPHDRPVVPIDPYEVVVSLGERGPIAQQMSRYEDRRSQRDMAAHIADGYNDG
                     GVQLLEAGTGVGKSFAYLVPALAWARANGERTIVSTNTINLQEQLVGKDLPLLRQALG
                     DSEYTPSYALLKGWRNYLCLARMNQAVSSQRTLLEQDKLDELLGIAEWAGHTADGTL"
BASE COUNT          276 a          459 c          452 g          250 t
ORIGIN      
        1 tcgagcgggg cgggttcctc tttgccatgt gcaccgcaac cgaaaccctc gatctcgcgc
       61 tggcagctga tggggtggac attgccgccg cttactccga cggcacgccg atggacccca
      121 atgcctcggc aaagatgaaa tgggaccgcg cgctcgcgtt tcataatgcc cagctggagc
      181 tgagtcccac cattccggtg tactccgaca tcgatggcca ccaggtaaac tcgccggagc
      241 ggcggcagcc gctcggatcg ttcaccctgt tcaacttcag cgcgaagatc gaccccgtgg
      301 ccacgatgct ggtgcagaac catcgccagg tcatccctga cttctatgga ctgacaacct
      361 catttacccg aaagacgctc aagcccagtg tcaccgtgct cgctgaagag cccggggctc
      421 cctgggtcaa gtacatccat ggcgagcatg gccagggcac ctggacgttc ttcggcggcc
      481 acgacccaga ggacccgcag catcagatcg gcgatgttct gactgatttg tcacttcacc
      541 ctcactcacc cggctaccgg ctcatcctca acaacgtgct gttcccggcc gcaaagaaga
      601 aagagctgaa gacttgagcg agcgcctcgc cccgggcgtt cgggcgtatc tggctgccga
      661 gatcagcgca gccggcggcc gggaagtctc cttcttcggg gacgttgacc gggacggagt
      721 ggtcaccgga gcgcgggtcg cagcccgggg cacggtggag atggtcttgg cactacccgg
      781 cggagcgcgc cggggacaga tgctgctgca caaccacccc agtggcgtgc tggagccctc
      841 ggtggccgac ctgaacgtgg ccgcccagtt gcatgatgcc ggcgtcggat tcggcattct
      901 caacaacagt gcaaccgagc tgtacgtcgt ggtggaagtc ccgcacgatc gtccggttgt
      961 tcctattgat ccctacgaag tcgttgtctc gctcggtgaa cggggaccga tcgcacagca
     1021 gatgagccgc tacgaggacc gtcggagcca gcgcgacatg gctgctcaca tcgccgacgg
     1081 ctacaacgat ggcggagttc agctgctgga ggcaggcacc ggggtaggaa agtcatttgc
     1141 ctacctggtg ccggccctgg cctgggcgag ggccaacggc gagcggacca tcgtcagcac
     1201 caatacgatc aatctgcagg agcagctggt ggggaaggat ctgccgctgc tgcggcaggc
     1261 gctcggtgac agcgagtata ccccgagcta tgcgctactg aaggggtggc gcaactatct
     1321 ctgcctcgcc cggatgaacc aggctgtctc gtcacaacga accttgctgg agcaggacaa
     1381 gctcgacgag ctcctgggca tcgccgaatg ggcgggccac actgccgacg gaaccct
//
LOCUS       DASRPQ010000338         1417 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3483351, whole genome shotgun sequence.
ACCESSION   DASRPQ010000338 DASRPQ010000000
VERSION     DASRPQ010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1417
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3483351"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1192
                     /gene="rho"
                     /locus_tag="VFD73_03960"
     CDS             <1..1192
                     /gene="rho"
                     /locus_tag="VFD73_03960"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF006886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HZI73174.1"
                     /translation="PRHDPNSGTYGNPASNQELSGSGSLMLGVLDLTARGSGFLRRRE
                     ASYLPSKGDVHVGERLIRQYQLRSGDEIAGSVRNGGKGRGPTLESISAVQDRPPEEMR
                     NRPEFSRLGAVHPNEQLRLESTTSSGPDDFTNRVIDLLCPLGKGQRALVVAPAKAGKT
                     MVLQSIARGVNRNQPAAELFILLVDERPEEVFEMEAAGVGEVIASSFDNPAQQHLTVA
                     ELTLERARRRVELGGDVVLIVDSLTRLARAYNTVEKGTGRTLSGGLDAQSLEKPKRFL
                     GSARRIDPGQGGGSLTIIATALVDTGSRMDQVIFEEFKGTGNSELVLSRELAERRIYP
                     AIDLVASATRREELLLDPTTLAASRALRQRIAGMTPINAMNDLLTDLRRTKTNSELIK
                     TLAA"
     gene            complement(1173..>1417)
                     /locus_tag="VFD73_03965"
     CDS             complement(1173..>1417)
                     /locus_tag="VFD73_03965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73175.1"
                     /translation="DSRSLMNVCFRAPSEELEAKFISEATKRGLDGLKGHRSVGGMRA
                     SIYNACPREAIEALVRFMKEFERANRTAARATQPAS"
BASE COUNT          270 a          447 c          464 g          236 t
ORIGIN      
        1 ccctcggcat gacccgaact cagggactta cggcaatcct gcatcgaatc aagagctcag
       61 tggcagcggc agcctgatgc tcggcgttct ggatttgacg gctcgaggca gcggtttcct
      121 ccgccgtcgt gaggcgagtt atctgccctc aaagggagac gttcatgtag gggaacggct
      181 catccggcag taccagcttc gctcgggcga cgagattgcg ggatcggttc gcaacggcgg
      241 aaagggtcgc ggcccgacgc tggagtcgat cagcgcggtg caagaccggc cgccggaaga
      301 gatgcgcaac cggcccgaat tcagccgcct cggcgcagtt cacccgaacg agcagcttag
      361 gctggaaagc accacgagca gcgggcccga cgactttacc aatcgagtca tcgatctgct
      421 gtgtcccctg ggcaagggac agcgggccct ggtggttgct cccgccaagg ctggcaagac
      481 gatggtactc cagtccattg cccgaggggt gaaccggaac cagcccgcgg ccgagctctt
      541 catcctgctg gtggacgaac ggccggaaga ggtgttcgag atggaggcgg ccggcgtcgg
      601 cgaggtgatt gcatccagct tcgacaaccc cgcgcagcag cacctgacgg tcgccgagct
      661 gacactcgag cgggcccgcc ggcgagtgga gttgggcgga gacgtggttc tgattgtgga
      721 ttctcttacc cggctggccc gagcctacaa cacggttgag aagggcactg ggcgaaccct
      781 ctccggcggt ctcgacgcgc aatcgctgga aaagcccaag cgctttctgg gcagcgcccg
      841 ccggatcgac ccgggccagg gaggcggttc actgaccatc atcgccaccg ccctggtgga
      901 caccggcagc cggatggatc aggtaatctt cgaggagttc aagggaaccg gaaacagcga
      961 gctggtattg agtcgagaac tggcggagcg acgcatctac cccgctatcg atctcgtggc
     1021 cagcgccact cggcgggagg agctgttact cgacccaacg acgctggcgg cctcccgggc
     1081 gctgcgtcag cgcattgccg gaatgacgcc gatcaacgcg atgaacgatc ttctgactga
     1141 cctgcggcgc accaagacca acagcgagct catcaagacg ctggctgcgt agcccgagcc
     1201 gctgtgcggt tcgcccgctc gaactccttc ataaaccgca ccagagcctc gatcgcctct
     1261 cgcggacagg cattgtagat gctggcccgc atcccgccga ctgagcggtg gcctttcagt
     1321 ccatcgagac cgcgcttggt ggcctcgctg atgaacttgg cctcgagctc ctcgctggga
     1381 gcgcggaagc acacattcat gagtgagcgg ctgtccg
//
LOCUS       DASRPQ010000339         1151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2856865, whole genome shotgun sequence.
ACCESSION   DASRPQ010000339 DASRPQ010000000
VERSION     DASRPQ010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2856865"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..303
                     /locus_tag="VFD73_03970"
     CDS             <1..303
                     /locus_tag="VFD73_03970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73176.1"
                     /translation="RTRRYEPVALYALAKSLKREGVDLHSFRGPWRPIRRALRRPGRN
                     AERAVPIVTNGNVEIVVDTAEHAADLSGFLNSAGVQHLEPVPNLRPPEQDLVSDAP"
     gene            611..>1151
                     /locus_tag="VFD73_03975"
     CDS             611..>1151
                     /locus_tag="VFD73_03975"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HZI73177.1"
                     /translation="MADPTRGELIEQDIRDLHRLGYAQQLFREMGGFSNFAISFSIIS
                     ILTGAVLLYGYGLKFAGPIINTVGWPIVSLFTLCVAASMAELASAYPTAGGLYFWAYR
                     LGGRSWAWVTAWMNMVGQITITAGINVAAAIYLVGAVTRILGVPAEQPIPMFGTTTSW
                     YFYIAVMVLIMIPQVLINVY"
BASE COUNT          201 a          353 c          359 g          238 t
ORIGIN      
        1 cgcacgcgaa ggtacgagcc cgtcgcgctt tacgcgctgg cgaagtctct caaacgtgaa
       61 ggtgtcgatc tccacagctt ccgcgggccg tggcgcccta tcaggcgtgc actccggcgt
      121 ccgggacgaa acgccgaacg cgcggttccc atcgtgacga acggcaatgt ggagatcgtg
      181 gtcgataccg cggagcacgc ggcggacctc tctggattct tgaattcggc aggagtacag
      241 cacttggagc cggtgccgaa cttgaggcca ccggagcagg atctggtatc tgacgcgccg
      301 tagggaagtt gcgcgacgcc gttagttgga gacggtcgta gagtctgctg ggggggtggt
      361 ctcggtagtc ttcgggaacg ctccccctat gagtgcgcct gcgatgccac cgattacccc
      421 gcccaaagcg actccgccaa gaccgggtcc gaggcagctc tcttgggtct ccctgagctc
      481 ctcgcacaga gcatacgcca gcccgccgag cgtgaacact cgtggatctc agctgttgcc
      541 gaacattcaa ggcggtgtat cgtcttgatc ttcggtcatc agacagtgct ctcgcatgag
      601 gacgagctgc atggcggatc ccacccgtgg cgagctgatc gagcaagaca tccgggacct
      661 ccatcggctg ggctacgcgc agcaactgtt ccgggagatg ggtgggtttt ccaatttcgc
      721 aatctccttc tcgatcatct ccatcctcac cggcgccgtg ctgctgtacg gctacggtct
      781 caaattcgcc ggcccgatca tcaatacggt cggctggccg atcgtcagcc tcttcactct
      841 ctgcgtggcg gcctcgatgg ccgagctcgc ctcggcatac cccacagcgg gcggattgta
      901 cttctgggcg taccggctgg gtggcaggag ctgggcgtgg gtgacggcgt ggatgaacat
      961 ggttggccag atcaccatca ctgccggcat caacgtcgcc gcggcgattt acctcgtggg
     1021 ggcggttacc cggatcttgg gagtacccgc cgagcagccg atcccgatgt tcggcacgac
     1081 taccagctgg tacttctata tcgccgtcat ggtgttgatc atgattccac aggtcctgat
     1141 caatgtctat g
//
LOCUS       DASRPQ010000340         1067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2556742, whole genome shotgun sequence.
ACCESSION   DASRPQ010000340 DASRPQ010000000
VERSION     DASRPQ010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2556742"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..404)
                     /locus_tag="VFD73_03980"
     CDS             complement(<1..404)
                     /locus_tag="VFD73_03980"
                     /inference="COORDINATES: protein motif:HMM:NF014015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73178.1"
                     /translation="MPRTLLAWSSGKDSAWALHMLQRQGVRVEALLTTLNEAADRVAM
                     HGVRRTLLESQAESLGIPLWQVPLPWPCTNDDYESRMADACRRAVANGFDSIAFGDLY
                     LRDVREYRERQLAGTGLTPVFPLWDIPTSLLA"
     gene            complement(406..948)
                     /locus_tag="VFD73_03985"
     CDS             complement(406..948)
                     /locus_tag="VFD73_03985"
                     /inference="COORDINATES: protein motif:HMM:NF042461.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6580 family putative transport protein"
                     /protein_id="HZI73179.1"
                     /translation="MQKNTARPLAIGLMILGALIRVTQHWNFAPVGAMSLFAGARMRG
                     WKAYLLPLALMAITDPLLGGYSVATPLVYASFLINVWIGSRLRNSESPVLIGSAALAG
                     SVQFFLITNFAWLTGSSMYPHSFAGMMSCYAAAVPFFWRTLASDLFYSGLLFGLHAWL
                     SRTVVRSERIGQQQAQAVAA"
BASE COUNT          220 a          323 c          345 g          179 t
ORIGIN      
        1 caggccagaa gtgaagtcgg gatgtcccac aaggggaaga cgggagttaa tcctgtaccg
       61 gcgagctgcc gttcccggta ttcccggacg tcgcgaaggt acaaatcgcc gaaagcgatc
      121 gaatcgaacc catttgccac cgcgcgccgg caggcatccg ccatccgcga ttcgtaatcg
      181 tcattggtgc agggccaggg gagtgggacc tgccagagcg ggatgccgag cgattcggct
      241 tgggattcca gcagcgtacg ccggacgcca tgcatggcga cccggtccgc cgcctcgttc
      301 aacgtggtga gaagagcctc gacccggacg ccctggcgct ggagcatgtg gagcgcccag
      361 gcgctgtctt ttcccgaact ccaggcgagc agggttcttg gcaagctacg ccgcgactgc
      421 ttgggcctgc tgctgcccga tcctctcgga gcggaccacc gtgcggctta gccaggcatg
      481 caaaccgaag agaagccctg aatagaacag gtccgatgcc agggttctcc aaaaaaacgg
      541 aaccgcggcg gcatagcagc tcatcatacc cgcgaacgag tgcgggtaca tgctgctgcc
      601 ggtcagccac gcgaagttag tgatcaggaa aaactggacg ctgccggcca gggctgccga
      661 tccaatcagg accgggctct cggaattacg gaggcggctg ccgatccaga cattgatgag
      721 aaaactcgca tagaccagcg gagtcgccac ggaatagccg ccgaggagcg gatcggtgat
      781 cgccatcaat gcgagcggca ggaggtaagc cttccagccg cgcatgcggg ctccggcgaa
      841 gagactcatg gcgccgacgg gggcaaaatt ccagtgctgc gttacccgaa tcagggctcc
      901 caggatcatg aggccgatcg cgagcggccg ggccgtgttc ttttgcatcg atttctcctc
      961 ctttattatg taccagactg cccggaggtg gactggttcg gttcccacaa ggtctccggg
     1021 gctccggtga tgtggctggc ccaccggctc cagacgaaca gcgcgtc
//
LOCUS       DASRPQ010000341         1007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4111040, whole genome shotgun sequence.
ACCESSION   DASRPQ010000341 DASRPQ010000000
VERSION     DASRPQ010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4111040"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(41..427)
                     /locus_tag="VFD73_03990"
     CDS             complement(41..427)
                     /locus_tag="VFD73_03990"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI73180.1"
                     /translation="MRLLIVEDSDLIRKVTRLAFPSRQHELHEADNGRKALEILTSAG
                     EPFDAIVLDLQMPDMNGVEFLRELRYRPRHAATPIVVATSETEDSPLLQQARRLGVAA
                     VLKKPWKPHELAATVLKASGRPSQET"
     gene            668..814
                     /locus_tag="VFD73_03995"
     CDS             668..814
                     /locus_tag="VFD73_03995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73181.1"
                     /translation="MAVEVVLNLLLMYLKYSLVVIALLIVVGAVLWLWAVARAWLHRA
                     RGPD"
BASE COUNT          163 a          302 c          348 g          194 t
ORIGIN      
        1 gcatccgtgt cggaaagccg cgatgggcgg tcatacttct tcacgtttcc tgtgacgggc
       61 ggccgctggc cttcagcacc gttgcggcga gttcgtgcgg cttccagggc ttcttgagga
      121 cggcagcgac accgagtcga cgagcctgct gcagcagggg cgagtcctcg gtttcactcg
      181 tcgcgactac gatgggagtg gccgcatggc gcgggcggta acgcaactcg cggagaaatt
      241 ccaccccgtt catgtcgggc atctggagat ccagaacgat ggcgtcgaac ggctcaccgg
      301 cactggtcag gatctccagt gccttgcgac cgttatctgc ctcgtggagt tcgtgctgcc
      361 gggagggaaa ggcgagcctg gtgaccttcc gaatgaggtc cgaatcctcg acgatcagaa
      421 gccgcacagt cgagccattg tcagggtgag cgatcgtggg cgaggcagtg aatctatggc
      481 ccgccgcgga ggcggatagg gcgactaccg taccgttgag ccaccgcgca accccctagg
      541 cactgccgca caaacaggac gggactcagc gtgtgggctg gggagtaacg gctccgcagc
      601 tccacggagg tgctgcagac cggctggctc ggatcctgcc tggagccgct tatcgcgttc
      661 aggatgaatg gccgtggagg tggtgcttaa cctgctcctg atgtacctga agtactccct
      721 ggtggtgatt gcgctgctca tcgtcgtggg cgcggtcctg tggctctggg ccgtggcccg
      781 cgcctggcta caccgcgccc ggggcccgga ttgacggcac cagaccccct cgctgcttcc
      841 aatggtgtgg gagcgactcc cgggtcagtg agaggccggg ttaggtgtcc gggttgatct
      901 gctcttgtag ggcacggcgg gcaagcacca tgtctttccg gagtaactcg acctccgctt
      961 tgatactggc cgcagcggca gcgagtgcct ctgaccgtcg gcgcagg
//
LOCUS       DASRPQ010000342         1115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4111046, whole genome shotgun sequence.
ACCESSION   DASRPQ010000342 DASRPQ010000000
VERSION     DASRPQ010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4111046"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1082)
                     /locus_tag="VFD73_04000"
     CDS             complement(<1..1082)
                     /locus_tag="VFD73_04000"
                     /inference="COORDINATES: protein motif:HMM:NF018208.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73182.1"
                     /translation="MRLLGEASTLRNQLTQVDSYLAGIDRESARASREEETATTELDR
                     LRVTRKSLSETMSQRQLELEAVAGERRRTEEELAAKRSANAELRKLLDGLRAETSKLQ
                     ARKQSLEEVLAHRTYTTESVKRLFAALDKGAVDGFRPLGVLADFVEVDPSFEKCVEEF
                     LHDELEYVVVQDWGHANSGVDFLRRDLDGRATFLVHPEPGTNGKMRLPEPTIGPETGI
                     VARLTDALKLTNGLKDRAADLLPRVSLCFVAEDRESARRLAVAYPHLYFLLQDGLCYH
                     GQTLAGGKKTASGPLALKREAREVGLTLVGKVAELESAAARAESLAREIGVLEAELER
                     LRGSQQAREKDRLALEHEMRKVAEDTG"
BASE COUNT          206 a          443 c          273 g          193 t
ORIGIN      
        1 cccgtatcct cggcgacctt gcgcatctca tgttccagcg ccagccgatc cttctcccga
       61 gcctgttgcg acccgcgcag ccgctccaac tccgcctcca gcaccccgat ctcgcgcgcc
      121 agcgactcag cccgcgccgc agccgactcc aactccgcca ccttccccac cagcgtaagc
      181 cccacctccc gagcctcccg cttcaaagcc agcggaccgc tagccgtctt cttcccccca
      241 gccaaagtct gcccgtgata gcaaagcccg tcctgcaata aaaagtaaag atgcggataa
      301 gccaccgcca gccgacgcgc cgactcccga tcctccgcca cgaagcatag cgacacccgc
      361 ggcagcagat ccgccgcccg atccttcagc ccgttagtca gcttcaaagc gtcggtaagc
      421 cgcgcgacaa tcccggtctc cggcccgatc gtaggctccg gcagccgcat cttcccgttc
      481 gtccccggct ccggatgcac caggaacgta gcccggccat cgaggtcccg gcgcagaaaa
      541 tcgacgcccg aattcgcatg tccccagtcc tgcactacga cgtactccag ctcgtcgtgc
      601 agaaactcct ccacgcactt ctcgaacgac ggatccactt ccacgaagtc cgccagaact
      661 ccaagcggac ggaagccgtc cacggcgccc ttatccagcg cggcgaatag ccgctttacg
      721 gactcggtgg tataagttcg atgtgccagc acctcctcta aagactgctt tcgcgcctgc
      781 agcttcgaag tctccgcccg caacccgtca agaagcttcc gcaactcggc gttggcagac
      841 ctcttcgccg ccagctcctc ttccgtccgg cgccgttccc cagccacagc ctccagctcg
      901 agctgacgct gggacatcgt ctcagacaaa gatttccgtg tgacccggag cctgtccagc
      961 tcggtcgtgg ccgtctcttc ttcccgagac gcgcgcgcgg actcgcgatc gatgcccgcc
     1021 aggtaactat cgacttgcgt gagctggttg cgtagagtgg aagcctcgcc caggagccgc
     1081 aaaaccgcct gacggccgct ttcgatcccc ttctc
//
LOCUS       DASRPQ010000343         1295 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2230083, whole genome shotgun sequence.
ACCESSION   DASRPQ010000343 DASRPQ010000000
VERSION     DASRPQ010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2230083"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            488..691
                     /locus_tag="VFD73_04005"
     CDS             488..691
                     /locus_tag="VFD73_04005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73183.1"
                     /translation="MPPEPRSAEYFDGWYADRVATPTVDEIMNRHMGFPPDTRAGVVP
                     AEAIPQLLKQDSTLRHGRERGAD"
     gene            1035..>1295
                     /locus_tag="VFD73_04010"
     CDS             1035..>1295
                     /locus_tag="VFD73_04010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HZI73184.1"
                     /translation="MPNPSHPSCGCHVASVYGPRMEVAELAHLRRARDLLDREYARPL
                     DVPAMARAALMSPSLFSRRFREAYGDTPYGYLQARRVERAMAL"
BASE COUNT          226 a          410 c          410 g          249 t
ORIGIN      
        1 tgcggacagc gctgccgact tatcctcgtt tccgcacgcc gaaatcaggg caaagcgggc
       61 ggtcggccgt gcgtaagtga ggataagtca agatgatcat ggaagtggcg ccggttggcg
      121 ccgcctgccc acccggacac aatcagcgct ggtaacccag ggttatcctg acggccactt
      181 gcctatgatc acgccgggag gtggtacttc gggcttggca cgccatggcc cagcgcgttg
      241 gcgcgggtag gagcgggcat gcaacctcca ctcgtctgag gacgtttcgg gcgtgtctgt
      301 ccccgccagg caccggcaaa ccaccagtgt catcccaccc catgagcggc tgtcgctacc
      361 tcaccccgaa cgggtgatgg gcctgacctc tcccatccag gcgggatata ccgtccaagc
      421 ccgtccagaa gggtgcgtgc gagcagcgcc agctgggagc aggattccag gtttctatac
      481 tgagccaatg cctccggagc cgcggtccgc cgagtacttc gacggctggt acgcagaccg
      541 ggttgccacg ccgaccgtcg acgagatcat gaacaggcac atgggctttc ctccggacac
      601 gcgagctgga gtggtccccg ccgaggcaat cccgcagctc ctgaagcagg acagcaccct
      661 caggcacggc cgggaaaggg gtgctgacta actagcttta cataatgtac attatcggca
      721 tctaggcgag acagggttgc atctgatgcg agaactcatc tcactgcgcg catctcggct
      781 cgatcctcag gtgagacgac ccggctggat gtctttctcc agctgcctgg cttgacttga
      841 gctttgcgct ccccgcgctg gtacttcaag aacctccgct tcttgctgtt atctgccagg
      901 gcgcagttgg tggtatgtgc catcgttgac cggtcggatc gcagacgacg cgacggctga
      961 cacgaagccg gctatgcgtg ccaggctccg gccactccct gggtgagcgg ctcgactgtc
     1021 ccgtcttaga gaacatgcct aatcccagcc atccatcgtg cggctgtcat gtcgcctcgg
     1081 tgtacggtcc tcgtatggag gtcgctgagt tggcgcatct gcgccgggcc agggacctgc
     1141 tggaccgcga gtatgcgcgg ccgctggacg tcccggcgat ggcgcgtgcc gcgctgatgt
     1201 cgccgtcact gttctctcgc cggttccgcg aagcatacgg cgatacaccg tacggctact
     1261 tgcaggccag gcgtgtggaa cgggcgatgg cgctg
//
LOCUS       DASRPQ010000344         1104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4111231, whole genome shotgun sequence.
ACCESSION   DASRPQ010000344 DASRPQ010000000
VERSION     DASRPQ010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4111231"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1104
                     /locus_tag="VFD73_04015"
     CDS             <1..>1104
                     /locus_tag="VFD73_04015"
                     /inference="COORDINATES: protein motif:HMM:NF037084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutamine synthetase type III"
                     /protein_id="HZI73185.1"
                     /translation="FGTIPPRVLAFMAEAERELYRLGVPVKTRHNEVAPGQYEIAPLF
                     EPSHIASDHQMLMMETLKRVAPRYGLQALLHEKPFAGVNGSGKHNNWSMSTDTGVNLL
                     DPQDETHTNMQFLVFLCATIRAVDLHADLLRASIASAANDHRLGANEAPPAIISIFLG
                     KMLNDILEQIEAGLPKRTIKGGVLDLGAKTLPMLPRHSGDRNRTSPFAFTGNKFEFRA
                     VGSSASIAWPNTVLNTIVAESLDTIAGELESAAGPKPTSAKLQSAVVEVLKRLIHSHK
                     RVLFDGDNYSEEWHAEAERRGLPNLKDSVTAFGVLRDKKNAQLFQKYGVLSQPELDSR
                     THIALEKYIKQLGIEAETMVSMARNQIFPAALQ"
BASE COUNT          223 a          348 c          344 g          189 t
ORIGIN      
        1 acttcggcac catcccgcca cgggtgctgg ccttcatggc tgaggcagaa cgggagctct
       61 accggctggg cgttccggtc aagactcggc acaacgaggt tgccccgggg cagtacgaga
      121 tcgcgccctt gttcgagccg agtcacatcg cgagcgatca tcagatgctc atgatggaga
      181 cgctgaagcg ggtggccccg cgttacgggc tgcaggcgct actgcacgag aagcccttcg
      241 cgggggtcaa cggatcgggc aaacacaaca actggtcgat gtccaccgat accggggtga
      301 acctgctcga tccgcaggat gagacccaca ccaacatgca gttcctggtc ttcctctgcg
      361 ccactatcag ggcggtcgat ctccacgctg atttgctccg ggcttccatt gcctcggccg
      421 cgaacgatca ccggctgggc gccaacgaag cgccccccgc gatcatctcg atctttctgg
      481 gcaagatgct gaacgacatt ctggagcaga tcgaagccgg gcttcccaag cggaccatca
      541 aaggtggggt gctcgacctc ggtgccaaga cgctgccgat gctcccccgg cattccggcg
      601 accggaatcg aacctcgccc ttcgcattta ccgggaacaa gttcgaattc cgcgccgtgg
      661 gctccagcgc cagcattgcc tggcccaaca cggtgctgaa caccatcgtg gccgagtcgc
      721 tcgataccat cgcgggcgag ctggagagcg ctgcgggccc gaagccgact tcggcgaagc
      781 tgcagtccgc cgtggtcgaa gtgctgaaac ggctgatcca tagtcacaag cgggtgctct
      841 tcgatggcga caactactcg gaggagtggc acgccgaagc ggaacggcgg ggacttccca
      901 acctcaagga ttcggtgacg gcgttcgggg tgctgcggga caagaaaaat gcccagctat
      961 ttcagaagta cggcgtgctc agccagccgg agctcgactc gcgcacccac attgcgctgg
     1021 agaagtacat caagcagctg gggatcgagg ccgagacgat ggtgtcaatg gcccggaatc
     1081 agatctttcc agccgcgctg cagc
//
LOCUS       DASRPQ010000345         1314 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_36951, whole genome shotgun sequence.
ACCESSION   DASRPQ010000345 DASRPQ010000000
VERSION     DASRPQ010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1314
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36951"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            285..>1314
                     /gene="gtdA"
                     /locus_tag="VFD73_04020"
     CDS             285..>1314
                     /gene="gtdA"
                     /locus_tag="VFD73_04020"
                     /EC_number="1.13.11.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR02272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047922 - gentisate 1,2-dioxygenase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gentisate 1,2-dioxygenase"
                     /protein_id="HZI73186.1"
                     /translation="MSAVLQSSIAADRKTFYDKIDKANVTPLWEVLHGIITPTPNTPC
                     KPYLWKWDQMWPWIQEAGRLISAQEAERRVLVLENPGLRGRSSITHSLYAGLQLILPG
                     EVAPAHRHSQSALRFILLGRGAYTAVDGEKVTMSVGDFVITPSWTFHDHGNPSDEPMV
                     WMDGLDVPLVELLDAQFMEKGSQESQHTDLDEGDNLAQFGNTMKPVEHRAKSRTSPLF
                     WYPYERTREALETMSRGRAPHPCWGHKMQYTNPVTGGWAMPTIGTFMQLLPKGFRGRD
                     YCSTDSTVYAAVEGSGRCCIGGETLAFGPRDVFVCPSWMAYRLEADEQAVLFSFSDRP
                     VQQALDLWR"
BASE COUNT          264 a          411 c          397 g          242 t
ORIGIN      
        1 agactcgtgg tatatggccc actgtctagg tgagtgttcg cttatgcgta attttatcta
       61 cataactgta tgattaacaa atcattatat tgtaatctcc agaactggct tttctaaacc
      121 ctcatcctga tacgttttga caatctcgcc ccaaggcatg tctaaggctc ggaatgtccc
      181 agaaagtggg ctattgccca tatcccagac gcgaagcgcc ttggttgccg cggccagctt
      241 ctttagcgga caatcgccgc atatccgcat cccagaggga gtcgatgtcc gcagtcctgc
      301 aaagcagcat cgccgccgac cggaagacct tttacgacaa gatcgacaag gccaacgtca
      361 ctcctctgtg ggaggtgctg cacgggatca tcacccccac ccccaacacg ccctgcaagc
      421 cctacctgtg gaaatgggac cagatgtggc cctggatcca ggaggccggg cggctcatca
      481 gcgcacagga agccgaacga cgcgtactcg tgctggagaa cccggggctg cggggccggt
      541 cgagcatcac tcacagcctt tacgccgggc tgcagctcat tctgccgggc gaggtcgcgc
      601 cagcgcaccg ccactcgcag tcggccctgc gcttcatcct gctcggaagg ggcgcctaca
      661 ccgccgtgga cggagagaag gtcaccatga gcgtgggcga cttcgtcatt actccgtcct
      721 ggactttcca cgaccacggg aacccgtccg acgagccgat ggtgtggatg gacgggctgg
      781 acgtgcccct cgtggagctc ctggacgcgc agttcatgga gaagggctcg caggagtcac
      841 aacacaccga cctcgacgaa ggcgacaatc tggcgcagtt cggaaacacg atgaagccgg
      901 tcgagcaccg ggcgaagagc cggacctcac cgctgttctg gtacccgtac gagcgcaccc
      961 gcgaagcgct cgagacgatg tcgcgggggc gcgcaccgca cccctgctgg ggccacaaga
     1021 tgcaatacac caatccggtt acgggcggct gggcgatgcc gacgatcgga accttcatgc
     1081 agctgctccc caaagggttc cggggcagag attactgctc gaccgattcg acggtgtacg
     1141 ccgccgtgga aggcagcggc cgatgctgca tcggcggcga aactctggcg ttcggaccgc
     1201 gcgatgtgtt cgtctgcccc tcgtggatgg cgtaccgcct cgaggcggat gagcaggcgg
     1261 tgttgttcag cttctccgat cgcccggtac agcaggcgct cgatctctgg cgag
//
LOCUS       DASRPQ010000346         1423 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4425547, whole genome shotgun sequence.
ACCESSION   DASRPQ010000346 DASRPQ010000000
VERSION     DASRPQ010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1423
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4425547"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            332..835
                     /locus_tag="VFD73_04025"
     CDS             332..835
                     /locus_tag="VFD73_04025"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI73187.1"
                     /translation="MPAYFFRSEPGAAELRRLARGESGRVCQRVLMIANLLEGMEHEE
                     AARLAGLSRSAAYEWHNRYEEDGIEGLRDRPRPGRQPRVDAVTRARFKERIVAGAELE
                     RDGVVAFRGVDAQRILKAEFDVDCSLSSTYRLLHRIQLSWLAPRPRHPQADATAQAAF
                     SQLLDCN"
     gene            826..1395
                     /locus_tag="VFD73_04030"
     CDS             826..1395
                     /locus_tag="VFD73_04030"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI73188.1"
                     /translation="MQLERVRAAQARGMRVEVWFQDEARIGQKNSLTRVWGQTGSRPV
                     APKDLGFVSAYLFGAVCPSEGKAAALILPICNTAAMNHHLSEISSQVAPDAHAVVILD
                     RAGWHRSQGLVVPGNITLLELPPYSPELNPVERVWHYLRSHWLANSVFPGPADIMDAW
                     EMAWNRFAANHGLVRSLCAVAWAPASPAP"
BASE COUNT          241 a          415 c          483 g          284 t
ORIGIN      
        1 tgctcgacag cgacggacag ctcagcgggg cggtctctcc ggattggctg catttcagcg
       61 aacgtggcta tgcgctcctc gcaacgagcc tcgagccggt gttggaccgt gtcctctatg
      121 gcgcccgctc ctgctgcaag cccagatgag ttacgctgcg cgctgggctc atcgccgttg
      181 gtctttgttt ctctaccagg aagtcaattc gcccttgacg ggggacatcg tgatccgctg
      241 gttcacgact aatacaaatt ataccggctt ccggtgatac ccagatgtgg tagagttgat
      301 aggcaagggt accatgtttg ggggatggat gatgccggcc tatttctttc gcagcgaacc
      361 tggagcggca gagctgcggc gcttggcacg aggcgagagc gggcgtgtgt gccagcgggt
      421 tctaatgatc gcgaacctgc tcgaggggat ggagcatgag gaggcggcgc ggctggcggg
      481 tctgagccgg tcagcggctt acgagtggca taatcggtac gaagaggacg gcatcgaggg
      541 attgcgtgac cgcccgcgcc cgggtcgaca gccccgggtg gacgccgtga cgagggcgcg
      601 tttcaaggaa cggattgtcg ctggcgccga gctggagcgg gacggggtag tggcgtttcg
      661 tggggtcgat gcgcaacgaa tattgaaggc ggagtttgat gttgattgca gcctgtcgag
      721 cacttaccgg ctgctgcacc ggatacagtt gagttggttg gccccgcgtc ctcgccaccc
      781 gcaggccgac gcgacggcgc aagcggcgtt ttcgcaactc ttggattgca attagagcga
      841 gtccgggccg cgcaagcacg cggtatgcga gtcgaggtgt ggtttcagga cgaggctcgg
      901 atcggccaga aaaacagcct gacccgagtg tgggggcaaa ccggcagccg gccagtcgcg
      961 ccgaaggacc tcgggttcgt ctcggcctat ttgtttggtg cggtctgccc gtcggagggc
     1021 aaagcggcgg cgctgatcct gccgatctgc aataccgccg ccatgaacca ccatctcagc
     1081 gagatcagca gtcaagtcgc gcccgatgct catgccgtgg tgatcctcga tcgtgccggc
     1141 tggcaccgca gccaaggcct ggtggtgccc ggcaatatca ctttgttgga gctgccgcct
     1201 tacagcccgg agctcaaccc ggtcgagcgg gtttggcact atctgcgcag ccactggctc
     1261 gccaactcgg tattccccgg cccggcggac attatggatg cctgggagat ggcctggaac
     1321 cggttcgccg ctaaccatgg cctggtccgc tcgctctgcg cggtcgcctg ggctcccgct
     1381 tcgcccgccc cctaggaatg cctgctatca aaccttgtcc tga
//
LOCUS       DASRPQ010000347         1113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2857971, whole genome shotgun sequence.
ACCESSION   DASRPQ010000347 DASRPQ010000000
VERSION     DASRPQ010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2857971"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(775..>1113)
                     /locus_tag="VFD73_04035"
     CDS             complement(775..>1113)
                     /locus_tag="VFD73_04035"
                     /inference="COORDINATES: protein motif:HMM:NF015999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaK/EbsC family protein"
                     /protein_id="HZI73189.1"
                     /translation="GYALMAVPATCRLDMHLVQAAVGDPHVRLATEQELLRDFPGIEL
                     GALPPLGSLLGAPLYVDQEVLQHETVVFAAGSQTESVQIKTADLLQHEQVTTLPLIKH
                     ADENGKDWLR"
BASE COUNT          200 a          358 c          363 g          192 t
ORIGIN      
        1 agcacgcctg tcacatgtcg tctcatgcgt cctcccatag ctactgccgt ccgcccgccg
       61 gaagacgcat gtgccgaagt cgaggctgac gatctggacg ttcgcgccga cgcgctcgat
      121 gcccctgaca ctgtccgtca ctccgccacg gcggcgatga ccggttagtg ggacaagtta
      181 agaagtgcca ggccatcacc cccaggcagc agtgctgcgc gacgcggacg gacgggcacg
      241 gccggcgatg accggcagcg gcatcggtgg ccgtgctcag gttccgctca cgcagacggc
      301 aacgcgccga tgtgcagacg ggctggtgaa cgtgtgtaga tggcatggag atctctcgat
      361 aagacggcga aacaccatac tgggcgccgg taagaacgtg tcacgagctg ctaaccggca
      421 gtgaccgtgc cctgccgagt cagtgacaac cagcgtggca atggtgacgt ggggcccgag
      481 agcagcccct ggtccccggg ccggtctcgc agaccgctgt catacttgcc gtgacctggc
      541 gctacacttc ccggctgctg aacttcgccg catattcgcc agaagatagc caacgcgaca
      601 gaaaatgccg tcctgcgcgc ctccaacgga tcgtaccgaa gggattgttc cagtacagaa
      661 ccgcggctac ttgcgcactg ggccgggcca gcatccgtca ctgagtgtga tccgatctca
      721 ggaccggcgt gttgcctgcc ggctatgcgt gccgcaggag gtgcagaccc gtggctaccg
      781 cagccagtcc ttgccgttct cgtccgcgtg cttgatcaac ggcaaggtcg tcacctgctc
      841 gtgctggagc aggtccgccg tcttgatctg aacggattcg gtctggctcc ctgcggcaaa
      901 gaccaccgtt tcgtgctgga gcacctcctg atcgacgtag aggggtgcgc ctagcagcga
      961 gccgagcggc ggcagggcgc ccagttcgat gcctggaaag tcccgtagca gctcctgttc
     1021 ggtggcaagc cggacatggg ggtcgcccac cgctgcctgg acgagatgca tgtcgaggcg
     1081 gcaggttgcc gggaccgcca tcagggcgta gcc
//
LOCUS       DASRPQ010000348         2871 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2858146, whole genome shotgun sequence.
ACCESSION   DASRPQ010000348 DASRPQ010000000
VERSION     DASRPQ010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2871
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2858146"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2245
                     /locus_tag="VFD73_04040"
     CDS             <1..2245
                     /locus_tag="VFD73_04040"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HZI73190.1"
                     /translation="FDWDATAFDGKVTTTLVSLRPGLDSVVMDMGHRLAVRSVIVEQI
                     AKGRAPSGRPAARPSARLAARFARPGDTLVVRLPHSVAMGDTVRFTVDYRGKITQGRG
                     LYFFKAEPERPHRPQQIYSGGGTDGNPNWIPTYGAPNDKETWELVATAPAGYTVVSNG
                     RQISDVGGKGKPHTVTWRQERPASTYLISLVIAPLVKVADRWRNVPLAYYVYPEDVPL
                     ARRLFGMTPDVIETYSKLTGVPYPWPQYAQTTVTDFVGGMENVGATTLVDWLPDARAY
                     QDRPWYRQSLIPHELAHQWFGNLVTTENWVNYWLNEGMAEFMGGQYWGAKLGRLGEED
                     YYLDEYRQFLSIDARRRSPLAAFNSNNVYSKGALVLEMLKKQLGPERFWASIHRYLTT
                     HAFGNVITEDLRRSVLQATGENLEWFWRQWMYQAGYPELVVTSAYDSAAATVALTVRQ
                     TQLDTAQADSTGIRVSTPEVFTGPVSVWVSTAKGDVRARLQLERREQVFQIAGVRSAP
                     LMVVFDANNAMLKRLTFEQRTTMLATQLARDPNLWNRTWVIEQLGRRASDTLALAALS
                     RAARGADYYRVRAEAALALGAFPAASALPALEAAIRDTSATVRERAVEALGAVGGAKA
                     YSLVVSAWKRDSSYEVRASALAAAVGIDSTGSKELVRAALTTPSYRDVIQDAAIDAAP
                     GVADSSIVDGLEKILGHQRGSALALASLARRGNNQALAVLVRHKEDSRAWVRRWVLDA
                     IDQQLQK"
     gene            complement(2249..>2871)
                     /gene="bioD"
                     /locus_tag="VFD73_04045"
     CDS             complement(2249..>2871)
                     /gene="bioD"
                     /locus_tag="VFD73_04045"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: protein motif:HMM:NF024891.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004141 - dethiobiotin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HZI73191.1"
                     /translation="LARALKNTGKSVVAIKPVETGCSGPPSSSEDGVRLARATGQSSP
                     AHAILRLPEPVAPVLATDGKVDEIDFDSLLLKIERFADQADYAIIEGPGGLLTPITWE
                     WNMADVARSLGAAALVVGADRRGTINHTLLTLSALELAGLPCLGVVLTTPGKPDPSTG
                     TNAAAIARLSGIDRVVALPSTDEDRVAAEAVEPVLGWLGTVVGAKG"
BASE COUNT          504 a          931 c          928 g          508 t
ORIGIN      
        1 cttcgattgg gacgcgactg cgttcgatgg gaaggtcacg accaccctgg tgtcgctcag
       61 gccgggactg gattcagtcg tcatggatat gggtcatcgg ctggcggttc gcagcgtgat
      121 cgtggagcaa atcgcgaaag gcagagctcc gtccggccgc ccggccgccc ggccgtccgc
      181 ccgactagcc gcccggtttg cccgccccgg cgacacgctg gtcgttcgct tgccccatag
      241 cgtggccatg ggcgacaccg tccgctttac ggtggactat cgcggcaaaa tcacccaggg
      301 gcgcggactc tatttcttca aggcggaacc cgaacggccc catcgtccgc agcagatcta
      361 cagcggcggc ggaaccgacg gaaacccgaa ctggattccg acctacggcg cgccgaatga
      421 caaggaaacc tgggagctcg tcgctaccgc cccagctggt tacaccgtcg tctccaacgg
      481 caggcagatc agcgatgttg gcgggaaagg aaagccgcat acggtaacct ggcggcagga
      541 gcgcccggcc tcgacctatc tcatctcgct cgtgatcgcg cctctggtca aggtggcgga
      601 tcgctggcgc aatgttcccc tcgcctacta cgtgtatccc gaggacgttc cccttgcccg
      661 ccgattgttc gggatgacac ccgatgtcat cgagacgtac agcaaactca cgggagtccc
      721 ctatccctgg ccccagtatg cccagaccac ggtcaccgat ttcgtgggtg gcatggagaa
      781 cgtcggtgcc accacactgg tcgattggct gcccgatgct cgcgcctatc aggaccgtcc
      841 ctggtatcgc cagtcgctga ttccgcacga gctggcacac cagtggttcg gcaatctcgt
      901 gaccaccgaa aattgggtga actactggct caacgaggga atggcggaat tcatgggagg
      961 gcaatactgg ggcgctaagc tcgggcgatt gggcgaggag gactactatc tcgacgaata
     1021 ccgccagttt ctcagcatcg atgcgcgccg ccgctcaccc ttagcggcgt tcaactccaa
     1081 caacgtgtac tccaagggtg cgctggtcct ggagatgctg aagaagcagc tgggtccgga
     1141 gcgcttctgg gcctcgatcc accggtatct gaccacccac gcattcggga acgtcatcac
     1201 cgaagacctc cgccggtcgg tgctgcaggc caccggcgaa aatctggagt ggttctggcg
     1261 gcagtggatg tatcaggccg gctatcccga gctggtggtg acttcggcat acgactctgc
     1321 cgctgcaacc gtcgctctca ccgttcggca gacccagctc gatactgccc aggccgactc
     1381 gaccggcatt cgggtcagca ctccggaggt gtttaccgga ccagtgtcag tctgggtgag
     1441 caccgccaag ggtgacgtcc gagcccggct gcagcttgag cgtcgggagc aggtgtttca
     1501 gatagcgggc gtcaggtcgg cgccgctgat ggtcgtgttc gatgccaaca atgccatgct
     1561 caagcgtctc accttcgagc agcgcactac catgctcgca acccagctcg cccgcgaccc
     1621 gaatctttgg aaccggacct gggtcatcga gcagctgggc cggcgggcca gcgacaccct
     1681 ggcgcttgcc gccctgagcc gggctgcgcg cggcgcggat tactaccggg tccgggccga
     1741 ggcggccctc gcgctcggcg cgtttccggc agcgtcggcg ttgccggcgc tcgaggcggc
     1801 gatccgtgat acttcggcca cggttcggga gagggcagtc gaagcgctcg gcgcggtggg
     1861 cggagcgaag gcctacagcc tggtggtttc cgcctggaaa cgagactcga gctacgaggt
     1921 ccgcgccagt gcgctcgccg cggcagttgg cattgactcg accggctcga aagaactggt
     1981 gcgggccgcg ctcacgactc cgtcgtatcg tgacgttatc caggacgccg caatcgatgc
     2041 tgcaccgggc gttgccgatt cctccatcgt cgatggattg gaaaagattc tgggacatca
     2101 gcgagggtcg gcactcgcgc tggccagcct ggctcggcga ggcaataacc aggcgctcgc
     2161 cgtcctggtc cgccacaaag aggacagccg tgcctgggtg cgccgctggg ttctggacgc
     2221 gatcgatcag cagttgcaga agtaacgtct agcccttggc tcccaccacg gttccaagcc
     2281 agcccaagac cggttccacc gcctccgccg caacccgatc ctcgtcggtg gagggcaggg
     2341 caacgactcg atcgatgcct gaaagacggg cgatggcggc agcgtttgtc ccggtagaag
     2401 ggtccggctt tccgggcgtg gtcagcacca cgccgaggca gggaagcccg gccagctcca
     2461 gagcgctcag ggtgagcagc gtgtgattga tcgttccccg gcgatcggcc ccgaccacca
     2521 gcgcggcggc gcccagactg cgggccacgt ccgccatgtt ccattcccag gtgatcggag
     2581 tgaggagtcc acccggtcct tcaatgatgg catagtccgc ctgatcggcg aaccgctcga
     2641 tcttgagcag caaggagtcg aaatcgatct cgtccacctt gccgtcggtg gcgagaactg
     2701 gcgcgaccgg ttcgggtagg cggagaatcg catgggccgg cgaactttgc ccggtagctc
     2761 gggccagccg cactccatct tccgagctgc tcggtgggcc ggagcagccc gtctccaccg
     2821 gcttgatggc aaccacggat ttgccggtgt tcttgagcgc ccgtgccagc g
//
LOCUS       DASRPQ010000349         1227 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1605273, whole genome shotgun sequence.
ACCESSION   DASRPQ010000349 DASRPQ010000000
VERSION     DASRPQ010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1605273"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(131..694)
                     /locus_tag="VFD73_04050"
     CDS             complement(131..694)
                     /locus_tag="VFD73_04050"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI73192.1"
                     /translation="MVTEEAAKHPDKPVEVWATDEHRIGLKPILRRVWAPKGQRPIAL
                     GHHRYKWLYVTAFVQPTSGEVFWYISNGVSKPFFAALLALFACEAGAGRDRVIVLELD
                     NAGWHTAPNLAVPDGIRPVYLPPYSPELQPAEHLWPVLDEPLANHYFGTLAELEHVVT
                     ERCRVLHRDQLKPGTNFHWWPNPAIPV"
     gene            complement(616..1188)
                     /locus_tag="VFD73_04055"
     CDS             complement(616..1188)
                     /locus_tag="VFD73_04055"
                     /inference="COORDINATES: protein motif:HMM:NF024980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI73193.1"
                     /translation="MARVVDHLSVEDLEARLRSARDPTATRHFQVIWLLARGHTIADV
                     AAVTSFGPRWIEQLLARYNAHGPEALGDLRRRNGSAPSVLRPELLARLPERLATPPSD
                     GGLWTGPKVAAWMAGELGLAAVLPQRGWEALKAINWSVQKPRPRHPAAATPAECETFK
                     KSWPRWSRRKRQSTRTNRLRSGPRMSTALG"
BASE COUNT          210 a          421 c          393 g          203 t
ORIGIN      
        1 ccaatggccg gtggatctcc gagtttatgg ccagccagcc cctgcacagg tgagcgactt
       61 gccccggtcc gcttgagctc ttgcggacgg caccgaagat gcctgggcgc cttatacggt
      121 ttccggttga tcagaccggg atagctgggt tgggccacca gtggaagttt gtcccgggtt
      181 taagctgatc gcgatggaga acgcgacagc gctcggtcac gacgtgctcg agctcagcaa
      241 gcgtcccgaa gtagtggttg gcgagtggct catccagaac aggccagaga tgttcggcgg
      301 gctgaagctc gggcgagtac gggggcaggt agacgggccg gatcccgtcc gggacagcca
      361 ggttcggtgc ggtgtgccag ccggcgttgt cgagctccag cacgatgacg cgatcccgtc
      421 ccgccccagc ctcacaggca aacagcgcca gcagcgcggc aaagaatggc ttggagaccc
      481 cgttcgagat gtaccagaac acctcgcccg aggtcggctg cacgaaggcg gtcacgtata
      541 accacttgta ccggtggtgg cccagcgcga tcggccgctg acccttgggc gcccacaccc
      601 ggcgcaggat cggcttcagc ccaatgcggt gctcatccgt ggcccagacc tcaaccggtt
      661 tgtccgggtg ctttgccgct tcctccgtga ccaccgtggc cagctttttt taaatgtttc
      721 gcactccgcc ggcgtggccg cggccggatg gcgcgggcgc ggcttctgca ccgaccaatt
      781 gatcgccttc agggcctccc agccgcgttg gggcaggacc gcagcgagcc cgagttcgcc
      841 cgccatccag gccgccacct tggggccggt ccacaggcca ccgtcggacg gaggcgtcgc
      901 aagccgctcg ggcaaccgcg ccagaagctc agggcgcagc acactcggtg cgctgccgtt
      961 gcgccgacgc aagtcaccca gggcctcggg gccatgggcg ttgtagcggg ccagcagttg
     1021 ctcaatccag cgcggcccaa agctcgtcac cgcggcgaca tccgcgatcg tgtgcccccg
     1081 cgctaacaac cagatcacct gaaagtgccg tgtcgcagtc ggatcccggg ccgaccggag
     1141 cctcgcttcc agatcctcca cgctcagatg atcaacaacc cgcgccatgg ctcacctccg
     1201 cgactcatgg ctcaccagcc tacccgt
//
LOCUS       DASRPQ010000350         3390 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2858439, whole genome shotgun sequence.
ACCESSION   DASRPQ010000350 DASRPQ010000000
VERSION     DASRPQ010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3390
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2858439"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..873
                     /gene="dnaA"
                     /locus_tag="VFD73_04060"
     CDS             <1..873
                     /gene="dnaA"
                     /locus_tag="VFD73_04060"
                     /inference="COORDINATES: protein motif:HMM:TIGR00362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HZI73194.1"
                     /translation="VVERHPETRVLYVGAEQFINEVIESIHSRTMPEFRRRYRTDVDL
                     FLVDDVHFLEGKEMTQEEFFHTFNALYEGNKQIVLTSDRPPKELPGLEARLVSRFEWG
                     MVADIGQPDLEHRIAILRKKQEQDHLELTIPDDVLRFIAEHVRSNVRELEGCIIKLLL
                     FASLKHKEVSIELAREALSDKIRPGEDGLAAPRALPSINKVQEVVARRWGVTPEGLRS
                     KARIKTLTVPRQIAMYLARELLEMQLVEIGQAFGGRDHSTVIHSVDKVSRQMSRDRGF
                     RERVEHARQELSAE"
     gene            1103..2218
                     /gene="dnaN"
                     /locus_tag="VFD73_04065"
     CDS             1103..2218
                     /gene="dnaN"
                     /locus_tag="VFD73_04065"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HZI73195.1"
                     /translation="MKLTITREQLQEGLVAVAASVPAKTTLPILSNILLEAGKDGIRL
                     SGTDLDISVSTTIAASVDQEGAITLPARKLVEIVRELPSAAIRLTASGEQRVTIECGR
                     SRFRLLGLPREEFPAFPSLKFEGGWRTSSRELQKLIGHVAFAASTEESRPILNGVLWE
                     LRPERMRMVATNGHRLARMDVPTSETQGASQADLIVPPKALEQIRRLFDTDETVEIAK
                     SENHLGFRTSATQIFTRLIEGPYPNYEQVIPRENDKVATADKSALTSALRRMSIVASD
                     QTHRIRMAFANGSCKLSVQTPDLGEAQEEVNVSYEGDPLEIGFNASYLLEILKYIPTD
                     EVRMTFKAPERAATCEPVGWDDPASYLALVMPLRLVD"
     gene            2246..2722
                     /locus_tag="VFD73_04070"
     CDS             2246..2722
                     /locus_tag="VFD73_04070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HZI73196.1"
                     /translation="MSRQEQQQTDRGGFWALAALAATVGASAAVLFAPDEGAKTRQRV
                     GRRLQSLRGEAAGTITYFQRELRRRRRQSRREKQLAGLTGFLIGAGMTALFMTESGSS
                     TRRRLGGTLSRIKVGAVDRIDRLRQQRSQSDAVEPGSAEPSVRSVQELGRDPDSVF"
     gene            complement(2730..>3390)
                     /locus_tag="VFD73_04075"
     CDS             complement(2730..>3390)
                     /locus_tag="VFD73_04075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73197.1"
                     /translation="NQVQLIDRTAYVRLTLARDTNSYLATIVLDSLQAAVGGVPASPD
                     SVIPARGTRWTGTLSPDGKLGALRADRSTTVGDQIGSQLRLLFPALPPAGARPGMDWT
                     DSTQVPIRADAFDAVESSLTSYHASESDDQRAKKALKLESRGTYQRTGKGSQYDQQME
                     MKASGSRTAVYYLNPDGTLVSAHGNDTGDMTITVPAVGQTVPVKQAGTYSISAIRPAK
                     R"
BASE COUNT          640 a         1044 c         1057 g          649 t
ORIGIN      
        1 gtcgtggagc ggcatccgga aacccgggtg ctctatgtcg gtgcggagca gttcattaac
       61 gaggtcatcg agagcatcca cagccggacc atgccggagt tccgccggcg ctatcgcacc
      121 gatgtcgacc tcttcctggt ggacgacgtc catttcctcg aagggaagga gatgacccag
      181 gaagagttct ttcatacctt caacgcgctc tacgagggta ataaacagat cgttctgacc
      241 tctgaccggc ctccgaagga gctgccgggt ttggaggccc ggctggtgag ccgcttcgag
      301 tggggcatgg tggcggatat cggccagccc gacctggagc accggatcgc cattctcagg
      361 aagaagcagg agcaggacca cctggagctc accatccccg acgacgtgct gcggttcatc
      421 gccgagcacg tgcgctccaa cgtgcgggag ctcgaaggct gcatcatcaa gttgcttctc
      481 tttgcctcct tgaagcacaa agaggtctcc atcgagctgg cccgcgaagc cctctccgac
      541 aaaatccggc cgggtgagga tggcctggcc gctcccagag cgcttccttc catcaataag
      601 gtgcaggaag tggtcgcccg gcgttggggc gtcacccctg aaggccttcg ctccaaggcc
      661 cgcatcaaga cgttgacggt tccccgacaa atcgcgatgt acctcgcgcg ggaactgctg
      721 gagatgcagc tggtcgagat cggtcaggcg ttcggcggac gcgaccactc caccgtgatc
      781 catagcgtcg acaaagtcag ccgtcagatg tcgcgcgacc gcggctttcg tgaacgggtc
      841 gagcatgccc gacaggaatt gtccgcagaa taatccccgc gacatcaccc agggtgtggg
      901 tactctggac agcggtggac agcggacgtt ttactcagcg cgactcccca tggcccacag
      961 cgagtcgaca gccgaaaaaa gttgtaagtg ccatgaaccc gagtttcttg gagcaccggt
     1021 caacatttcc agagcctcta ctaccgctac taagttttta aatacgaagg gtagtatcta
     1081 ttaaagcgtc ccgaggagcg gcatgaagct tacgattacg cgggagcagc tgcaggaagg
     1141 tctggttgcg gttgctgcca gtgttcccgc caagacgacg ttgccgatcc tgtcgaatat
     1201 cctgctcgag gccggcaagg acgggatccg tctctcgggt accgatctcg atatctcggt
     1261 cagcaccacg atcgcggcgt cggtcgatca ggaaggcgct atcacccttc cggctcgcaa
     1321 gctggtcgag atcgtgcgtg agcttcccag cgctgccatc cggctgactg cctcgggcga
     1381 acaacgggtc accatcgagt gtgggcgctc ccgcttccgg ttgttgggct tgcctcggga
     1441 agagtttcca gcatttccca gcctgaagtt cgaggggggc tggcgcacct cctcgcggga
     1501 gctacagaag ctcattggcc atgtcgcctt tgccgccagc accgaagaga gccggccgat
     1561 tctcaatggc gtcctctggg agcttcgccc cgagcgcatg cgtatggtcg ccaccaacgg
     1621 acaccgcctg gcccgaatgg atgtgccgac cagcgagact cagggtgcct ctcaggccga
     1681 cctgattgtc ccccccaagg cgctggagca gatccggcgg ctcttcgata ccgatgagac
     1741 ggtggagatt gccaagagcg agaatcatct cggattccgc accagcgcca cccagatctt
     1801 cacccgcctg atcgagggtc cctatcccaa ctacgagcag gtcattcccc gcgaaaatga
     1861 caaggtcgcc actgccgaca agagcgccct gacgtcggcg cttcgccgga tgagcatcgt
     1921 ggccagcgat cagacgcacc ggatccgtat ggcgttcgcc aatggctcgt gcaagctctc
     1981 ggtccagacc cccgatctgg gagaggctca ggaagaggtc aacgtgagct atgagggcga
     2041 tcctctggag atcggcttca atgcctccta cctcctggag atcctgaagt acatccccac
     2101 cgacgaagtt cgaatgacct tcaaggcacc cgaacgcgcc gccacctgcg agccggtcgg
     2161 ctgggacgat ccggcgagct atctggcatt ggtgatgccg ctacggctgg tagattaaat
     2221 agtcgctatc gaagcagagg agctcatgtc caggcaggag cagcagcaga cggaccgggg
     2281 tggattttgg gcgctcgccg cacttgcggc cacggttgga gccagcgcgg cagttctctt
     2341 cgccccagat gaaggtgcca agacccgcca gcgggttggc cgccgcctcc agtcgcttcg
     2401 cggtgaggcg gcaggaacga ttacctattt tcagcgtgag ctgcggcgtc gccggcgcca
     2461 gtctcggcgg gaaaagcaac tcgccggatt gactggattc ctcatcgggg cagggatgac
     2521 cgcactcttc atgaccgaga gtggttcatc cactcgccgg aggctcgggg ggacgctgag
     2581 ccggatcaag gtcggggcgg tggatcgaat cgatcggctt cgccagcaac gctcgcagtc
     2641 tgacgcggtg gaacctgggt ccgcggagcc gagcgtgcgg agcgtccagg agctcggccg
     2701 cgatcccgat tcggttttct aggtgcggtt cagcgtttgg cgggacggat cgcgctgatg
     2761 ctataggtgc cggcttgctt gaccggcacc gtttgtccaa ccgcaggcac cgtgatggtc
     2821 atatcgccgg tgtcgttgcc gtgcgccgac accagcgttc cgtcgggatt caggtagtaa
     2881 actgcggtcc ggctgcctga cgccttcatc tccatctgct ggtcgtactg acttcccttc
     2941 ccggtccgct ggtaggtccc cctgctctcc agtttcaagg ctttcttggc ccgctgatcg
     3001 tcgctctcgc ttgcgtgata gctggtgaga gaactttcga cggcatcgaa cgcatcggcc
     3061 cggattggaa cttgggtgct gtcggtccaa tccattcccg ggcgtgcgcc cgccggtggc
     3121 aaagccggga acagcaggcg cagctgacta ccgatctggt ctcccacagt cgtcgagcgg
     3181 tcggcccgca acgctcccag ctttccatcg ggactcagag taccggtcca tcgggtgccc
     3241 cgagccggaa tgaccgagtc gggagatgcg ggcactcccc ccacggcggc ctgcaatgag
     3301 tccaggacaa tggtggccag atagctgttg gtgtcccggg cgagggtaag acgaacgtac
     3361 gcagttcgat cgatcagctg aacctgattg
//
LOCUS       DASRPQ010000351         1226 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2558842, whole genome shotgun sequence.
ACCESSION   DASRPQ010000351 DASRPQ010000000
VERSION     DASRPQ010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1226
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2558842"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1226)
                     /locus_tag="VFD73_04080"
     CDS             complement(<1..>1226)
                     /locus_tag="VFD73_04080"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HZI73198.1"
                     /translation="QLEDKADVYTLLEQWDDILARSREMHPGMLVVGRLKPGVPLSQA
                     QSEMTAIAARLAEAYPKSNSKHGVNVAPLTAVIVGNVRPTLLVLLGAVGFVLLIACAN
                     VANLLLARSTGRQKEMAIRCAIGAGRGRVVRQLLTESVVLALAGGIAGLAVARWGTQA
                     VLAAVPGGLPRMNSIGVDASVLAFTLGVSLLTGIVFGLVPALQVSVIDLHEMLKEGSR
                     GSSAGHRRLRNLLVISEVAAALVLLAGAGLMLRTVWSLRGVNPGFDTSHVLTFSVGLS
                     PANTSSSQRILQTLEQTVDRIDNVPGVKSAGLSPLIPLGGSDNEMPFYVNGRPRPTSQ
                     GDMSWALLYVTDPGYLKAMSIPLLRGRYIEPQDMHRGSHVVVIDDVMARTVFPNEDPI
                     GKSIVMGNLSGDLGPE"
BASE COUNT          232 a          382 c          406 g          206 t
ORIGIN      
        1 ctcgggaccg agatcgccgc tcaagttgcc catcacgatg ctcttgccaa tcgggtcttc
       61 attcgggaat accgtgcgcg ccatgacatc gtcgatcacc accacgtggg agccgcggtg
      121 catatcctgg ggttcgatgt aacgtccgcg aaggagcgga atgctcatgg ccttgagata
      181 gccggggtct gtaacgtaca acagcgccca tgacatgtcg ccttgggagg tggggcgagg
      241 ccgtccgttc acgtagaagg gcatctcgtt gtcgctgccg cccaggggaa tcaacgggga
      301 caatccggcg ctcttcactc cgggcacatt gtcgatgcga tctacggtct gctcaagcgt
      361 ctggaggata cgttggctgc tgctggtgtt ggccggggac aggccgactg aaaaggtcag
      421 aacgtggctg gtgtcgaaac cgggattgac gcccctgagg ctccagacgg tgcgcagcat
      481 caagccggct ccggcgagca gcaccagcgc ggcggctact tcggagatca ccagcaggtt
      541 gcgcaggcgg cggtgcccgg ccgaggaacc acggctgccc tctttcaaca tctcgtgcag
      601 atcaatgacg gagacctgca gggccggaac cagtccgaag acgatgccgg tgaggagcga
      661 gacgcccaga gtgaaggcga gcaccgaggc gtccacaccg atgctgttca tgcggggcag
      721 gccgccggga accgccgcca gtaccgcttg cgtgccccag cgggcaacgg ccaacccggc
      781 gatacccccg gcgagcgcaa gcaccacgct ctcagtaagc agttgccgga ccacgcggcc
      841 gcgtccggcg ccaatagcgc agcggatggc catctccttc tggcgtccgg tagaacgggc
      901 caggagcagg tttgccacgt tggcgcacgc gatgagaagc acgaatccca ccgcgcccag
      961 cagcaccagc agggtgggac ggacgtttcc aacgatcacg gcggtgagcg gcgcgacatt
     1021 gacgccgtgc ttggagttcg attttggata agcctcagcc aggcgggccg cgatggcggt
     1081 catttccgat tgcgcctggc ttagcggtac gccgggcttg agccgcccca ctaccaacat
     1141 gccgggatgc atctcgcgcg acctggccag gatgtcgtcc cactgttcca gcagcgtgta
     1201 gacgtcggct ttgtcttcga gctgaa
//
LOCUS       DASRPQ010000352         1541 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2859352, whole genome shotgun sequence.
ACCESSION   DASRPQ010000352 DASRPQ010000000
VERSION     DASRPQ010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2859352"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1008
                     /locus_tag="VFD73_04085"
     CDS             <1..1008
                     /locus_tag="VFD73_04085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73199.1"
                     /translation="SPVSGRGQFVPLDMSFRQTSVSGFPAIALRSSYIEIVAVPTIGM
                     KLTNLRRLNGREWLWRSDQIPLAPPIPGASFVDTADSGGWDECFPTVGPCPVPGAPAG
                     AATLPDHGELWSARWTSSVYDHAEGTTLAGSAPGTLFPYEFHREVTLDSARPVVRFRY
                     RVRHTGDTPFPWIWSSHPLLNVQPGSELHLPGVSQVKVDAVHGRNDLQEDEVVGWPGG
                     VSRDADRFTFPPDGGWAAKLFGDIGPESRMRLTDPRKGERLEIVVDRAVVPQVGLWIN
                     CSGWAPPRRKDYYNFGLEPCIGAPDRLDRAVSDWRTAQILHPGEIREWSLEVWLLEDT
                     D"
     gene            complement(1005..>1541)
                     /locus_tag="VFD73_04090"
     CDS             complement(1005..>1541)
                     /locus_tag="VFD73_04090"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HZI73200.1"
                     /translation="EEIYHPYRRYFASNTGPFVFEFQTIAKFSGMDPQRFAGRLDEFF
                     SALPRDAEYAVEIRNEEFLTPMYFAVLREHGVAHVFNSWTRMPPIGHQMDLPGAITAP
                     FIIARALLRPGRTYNEAVDAFAPYDRIREPNPKLRRDLVRLVHTALETRVPAYLLVNN
                     RTEGSAPLTIAAVAEMLD"
BASE COUNT          281 a          465 c          492 g          303 t
ORIGIN      
        1 tcgccggttt cgggacgtgg ccagttcgtg cctttggaca tgtcgttccg tcagactagc
       61 gtttccggct ttccagcaat cgcgctgcgt tccagctata tcgagattgt ggcggtcccc
      121 acaatcggaa tgaagctcac caacctccgc aggctgaatg gccgcgagtg gctttggagg
      181 agcgaccaga ttccgctggc acccccaatt cccggcgcct ccttcgtcga cactgcggat
      241 agcggaggat gggatgaatg ctttccaaca gtgggtccct gcccggttcc cggagcgccg
      301 gctggtgctg cgaccctgcc tgaccacgga gagttgtggt ctgcccggtg gaccagctcg
      361 gtctacgatc atgccgaggg gacgaccctc gccggctcgg cgccaggcac tctctttccc
      421 tacgagttcc accgggaggt caccctcgac tctgcccggc cggtggtccg gtttcgctat
      481 cgggtgcgcc acaccgggga cactccgttt ccatggatct ggtcgtcaca tccattgctg
      541 aatgtccaac caggctccga gctgcaccta ccgggggtga gccaggttaa ggttgacgcg
      601 gttcatggcc ggaacgatct ccaggaggac gaggtggtcg gctggccagg aggagtgagc
      661 cgtgacgccg atcgcttcac cttccccccg gatgggggct gggctgcaaa gctcttcggt
      721 gatataggac ccgaatcgcg aatgcgattg accgatcccc gcaaaggaga gcgactcgag
      781 atcgtggtgg accgcgcagt ggttccccag gtcgggctgt ggatcaattg cagcggatgg
      841 gcaccgcctc gacgaaaaga ctattacaac tttgggctgg agccctgtat cggcgctccc
      901 gatcgtctcg accgcgcggt gagtgactgg aggacggctc agatccttca cccgggcgag
      961 atcagagaat ggtcgctgga ggtgtggctg ctcgaggaca ccgactagtc caacatttcg
     1021 gcgactgccg cgatcgtcag tggagcactc ccttccgtcc gattgttgac caggagatag
     1081 gccggcactc gggtctccaa cgccgtatgg accagccgca caagatctcg cctcagcttc
     1141 ggattgggct cccgaattcg gtcatacggt gcaaacgcgt cgactgcctc gttgtaggtg
     1201 cgaccagggc ggagcagtgc ccgggcgatg ataaacggag cggtgatcgc gcccggcaga
     1261 tccatttggt gcccgatcgg tggcattcga gtccaggagt tgaacacgtg tgctacgccg
     1321 tgctcgcgaa gcaccgcaaa gtacatcggc gtcaggaatt cctcgttccg gatctcgact
     1381 gcgtattccg cgtcacgagg cagcgcggag aagaactcat cgagacgccc ggcgaaccgc
     1441 tgcggatcca tgccgctgaa cttggcgatg gtctgaaact cgaagacgaa gggcccggtg
     1501 ttgctggcga aataccggcg atacggatgg tagatctcct c
//
LOCUS       DASRPQ010000353         1018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4113112, whole genome shotgun sequence.
ACCESSION   DASRPQ010000353 DASRPQ010000000
VERSION     DASRPQ010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4113112"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..590)
                     /locus_tag="VFD73_04095"
     CDS             complement(<1..590)
                     /locus_tag="VFD73_04095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012881221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZI73201.1"
                     /translation="MPFKANAARRHHIPKQRHRVTNWAAYDAGLRARGSLTIWFTTEA
                     IEAWRAEPRPGRGGQPSYSDLAITTALTLRAVFRLALRQTEGLIGSLLQLLGLDLPVP
                     DHSTLSRRAETLEVPRPKAGSAPMHLLVDSTGLKLCGPGEWLTEQHGTKRRRAWRVLH
                     LATDADTGRIVASVLTDKDTDDSSQVGPLLDQLEGAV"
     gene            706..>1018
                     /locus_tag="VFD73_04100"
     CDS             706..>1018
                     /locus_tag="VFD73_04100"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HZI73202.1"
                     /translation="MPELNGGCLCGAVRYTSNSAPEFVGVCHCRDCQKYTGSAFAIMV
                     SLPKTALQIRGTIKTFSKLGDSGKPILRHFCPECGSSIADEPSRRPGAIILNAGTLDD
                     PS"
BASE COUNT          182 a          330 c          325 g          181 t
ORIGIN      
        1 accgctccct cgagctggtc gagcagggga ccgacctggg agctgtcatc ggtatccttg
       61 tcggtcaaca ccgaggcgac aatccggccg gtgtcagcgt ccgtcgccag atgcagcact
      121 ctccaggccc ggcgccgctt ggtgccgtgc tgctcggtca gccactcgcc cgggccacag
      181 agcttcagcc ccgtgctgtc caccagcagg tgcatcggcg cactccccgc ttttggtcgc
      241 ggcacctcca gcgtctcagc ccgccggctc agcgtggagt ggtccggcac cggcagatcg
      301 aggccgagca gctggaggag ggagccgatc agcccctcgg tctggcgcag cgccaggcgg
      361 aacaccgccc gcagggtcag cgccgtcgtg atcgccagat cggagtagga gggttgccca
      421 ccccggccgg ggcgcggctc agctctccag gcctcaattg cctccgtcgt gaaccatatg
      481 gtcaggctgc cacgggcgcg taggccagcg tcatacgcgg cccagttggt cactcggtgc
      541 cgctgcttgg ggatgtgatg gcgccgagcg gcattcgctt tgaacggcaa gaggggtgcc
      601 cctgctggtg gaggggtctc gccccggtgt catcttaccc caagccccca agcgggcgat
      661 cgatgcaaca aggtgatata gcggccgaaa ttagagggag agcaaatgcc tgaattgaat
      721 ggcggctgcc tttgtggcgc ggttcgctat acatcgaatt cggcaccgga attcgtcggt
      781 gtatgtcact gtcgcgactg ccagaaatac accggcagcg cgtttgcgat catggtgagc
      841 ctgcccaaga cagctctcca aatccgggga acgatcaaga cattcagcaa actcggcgat
      901 agcggtaagc cgatcctgcg ccatttctgc ccagaatgcg gctcatccat tgccgacgag
      961 ccatcaaggc gacccggggc gattattctc aatgctggca ccctcgatga tccgagct
//
LOCUS       DASRPQ010000354         1060 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_354994, whole genome shotgun sequence.
ACCESSION   DASRPQ010000354 DASRPQ010000000
VERSION     DASRPQ010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_354994"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..110)
                     /locus_tag="VFD73_04105"
     CDS             complement(<1..110)
                     /locus_tag="VFD73_04105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017370549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine synthetase N-terminal
                     domain-containing protein"
                     /protein_id="HZI73203.1"
                     /translation="MSKNYIFSSESVGEGHPDKVCDTISDAVLDACLAQD"
     gene            217..>1060
                     /locus_tag="VFD73_04110"
     CDS             217..>1060
                     /locus_tag="VFD73_04110"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HZI73204.1"
                     /translation="MSTTLRALRALSDPTRLRIVALVEKNELSVNELQEITQMGQSRI
                     STHLGLLQDAELVQSRREGKRTFYRLNETANEVAREFIQVAIRGAKELTEYAADQVNL
                     KRLLSRREDQAQLFFNQIAGRYDRCYGPGRSWQAFGQLLLEILPPLTVADLGAGEGLV
                     SELLARRCKKVIAVDNSEKIVEFATAKARKNGLKNLEFRLGDLQDPPVDSSSVDLVIL
                     SQALHHAAEPLKAIHAAFRILKPGGQLVILDLLRHKFDQARELYGDRWLGFPESDLQR
                     WIESA"
BASE COUNT          204 a          315 c          332 g          209 t
ORIGIN      
        1 ttgtcctggg ccaaacacgc gtccagcacc gcatcggaaa tcgtgtcgca gactttgtcc
       61 ggatgcccct cacccacgga ctcggaagaa aagatgtagt ttttgctcat tcagttttgg
      121 tgtcgcgcag ccggtatgcc agccacatat tgacgtatca ggatgcgaag atataatcgt
      181 tgcgtcattc gtcaatgcgg ttttttaaaa acgatcatgt caaccacgct tcgagcgctt
      241 cgtgccctgt cggacccgac ccggttacgc atcgtagcct tggtggagaa aaacgagctt
      301 tcggtcaatg agctgcagga gatcacgcag atgggccagt cgcggatctc gacccatttg
      361 gggctgttgc aggacgcgga gctggtgcaa tcccggcggg agggcaagcg caccttttat
      421 cgcctgaacg agacggccaa cgaggtggcg cgggagttca tccaggtagc catccggggg
      481 gcgaaggagc tgaccgagta tgcggccgat caagtgaacc tgaagcgtct cctttcccgg
      541 cgggaggatc aggcgcagct gttcttcaat cagattgccg ggcgctacga ccgttgctac
      601 ggcccggggc gttcctggca ggcctttggg cagctgctcc tggagatcct gccgcccttg
      661 acggtcgccg atctcggcgc gggcgaaggg ctggtgagcg agctgctagc ccggcgctgc
      721 aagaaggtga tcgcggtgga caactcggag aagatcgtgg agttcgccac ggccaaagcc
      781 cgcaagaacg ggctgaagaa cctggagttc cgcctgggcg acctgcagga tcccccggtt
      841 gattccagct cggtcgacct ggtcatcctc agccaggcgc tgcatcacgc ggccgagccc
      901 ctcaaggcta tccatgccgc ctttcgcatt ctcaagccgg gcggccagct cgtcatcctg
      961 gatctgctcc ggcacaagtt cgatcaagca cgcgagcttt acggggaccg ctggctgggc
     1021 ttcccggaaa gcgatctcca gcgctggatc gaatccgccg
//
LOCUS       DASRPQ010000355         2693 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_355087, whole genome shotgun sequence.
ACCESSION   DASRPQ010000355 DASRPQ010000000
VERSION     DASRPQ010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2693
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_355087"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..558)
                     /locus_tag="VFD73_04115"
     CDS             complement(<1..558)
                     /locus_tag="VFD73_04115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI73205.1"
                     /translation="MTAILEASGLRKIYRGGDGNPIEVLAGVDFNVDRGEFVAIVGAS
                     GSGKSTLLHLLGALDAPSEGTVRLAGQAYQSETAEGLAAIRNRKLGFVFQFHHLLREF
                     TALENVMMPLLIAGETDAKARSRAEELLAAVGLAGRMSHRPSQLSGGEQQRTAVARAL
                     AADPLVVLADEPSGNLDYGNSERLHQ"
     gene            complement(555..1736)
                     /locus_tag="VFD73_04120"
     CDS             complement(555..1736)
                     /locus_tag="VFD73_04120"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HZI73206.1"
                     /translation="MNTVISTGGVAVGVTALIVVLGVMNGLRDDLRERILVANPHLRI
                     LTYGAGLRLDDWRNVLLQIRKQPGVVAASPEVISQAGITAGQDYGEGVNLLGFDPDTG
                     KKAVTSLPQSITKGDLSFRTTKPGVDGGVLLGSRLASRLSVYPGDVVTLVPVTETKVN
                     PALGVAVPRFWKLEVTGIFNTGMFQYDNQFVVMSRQLAQRFTGLGDAVSGIAVRVNDP
                     DRAPEIGTALENRLGYPYRALDWQTQNSSLFSALQLEKLAMGLIIFFIMVVAAFNIVG
                     TLTMVVTDKTREIGILRAMGLTSPAVARVFLVQGAVIGVVGTTIGLLLGLSVSYVVDR
                     SGWVRINPAVYFIDHLPVHIEWSDVAVVVLASLAIALAATVYPSRSAAALTPVEAIRH
                     E"
     gene            complement(1919..>2693)
                     /locus_tag="VFD73_04125"
     CDS             complement(1919..>2693)
                     /locus_tag="VFD73_04125"
                     /inference="COORDINATES: protein motif:HMM:NF012379.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HZI73207.1"
                     /translation="GGFERVYEIGHDFRNEGMDRTHNPEFTMLELYQAYADYEDMMRL
                     TEALVCGTVEHCVGTRRLERFGTTLDFTPPFPRVRFLDAVQQQAKLDLRVASDAEMRG
                     VLQRAGSEPEALGALSGPRLQDEVFKTLVEPDLIQPTFVVDYPKALSPLAKEHRNDPW
                     LTERFELFIGGRELANAFSELNDPDDQRRRFQEQAQERAKGDAEAHSYDADYIRALEY
                     GMPPAGGMGLGIDRLMMIIAGQPSIRDVILFPAMRPEGT"
BASE COUNT          520 a          865 c          814 g          494 t
ORIGIN      
        1 ctggtgaaga cgttcgctgt tgccgtaatc gagattacca gaaggttcat cagccagcac
       61 aacgaggggg tcagccgcaa gcgcccgggc gactgccgtg cgctgctgct ctccgcccga
      121 gagctgcgac ggccgatggg acatccttcc agccagccct actgccgcga gcagctcttc
      181 ggcacgggaa cgggctttgg catcggtctc accggcaatg agcagcggca tcatgacatt
      241 ttccaaggcg gtgaattccc gtagcaggtg atgaaactga aacacgaaac cgagctttcg
      301 gttccggatg gcggccaggc cttcggcggt ctccgattgg tatgcctgac ccgccagcct
      361 gacggtaccc tccgatggtg cgtccaacgc tcccaataga tgaaggagcg tactcttgcc
      421 cgagccgctc gccccgacga tggccacgaa ctcccctcga tccacgttga agtcgacgcc
      481 ggcaaggact tcaatcggat tgccgtctcc accgcggtag atcttccgca agcccgacgc
      541 ttcgagaatg gccgtcattc gtggcggata gcctcgacgg gagtcagggc ggcagcggat
      601 cgtgaggggt acacggtcgc ggcgagcgcg atggcgagac tggcgagcac cactaccgcc
      661 acgtcggacc attcgatgtg gaccggaagg tggtcgatga agtataccgc gggattgatg
      721 cggacccacc cagaccgatc gaccacgtac gagaccgaga gcccgaggag taatccgatt
      781 gtggtcccga ccaccccgat cactgctccc tgcaccagga acacccgggc cactgccggt
      841 gaggtcaggc ccatggcgcg aaggatgccg atctcccggg tcttgtccgt caccaccatc
      901 gtgagcgttc ccacgatatt gaacgccgcc accaccatga taaaaaagat aatcagcccc
      961 attgccagct tctcgagttg caaggcgctg aatagactcg agttctgggt ctgccaatca
     1021 agcgcccgat agggatatcc caggcggttc tccaacgccg tcccgatctc cggtgcccgg
     1081 tcgggatcgt tcacccggac ggcgattcca gagaccgcat cacccagacc ggtgaaccgt
     1141 tgcgcgagct gccgcgacat gaccacgaac tggttgtcgt attggaacat gccggtgttg
     1201 aagatcccgg tgacttcgag cttccagaag cgtgggaccg ccacgcctag cgccggattg
     1261 accttggtct cggtgaccgg caccagggtg accacgtctc cgggatacac cgagagcctg
     1321 ctcgccaggc gagagcccag cagcactcct ccgtccacgc ccggcttggt ggtccggaac
     1381 gacaggtcgc ctttggtgat ggactgagga agcgaggtga ccgctttctt accagtatcg
     1441 ggatcaaagc cgagaagatt gacgccctcc ccataatcct ggccggcagt gattccggcc
     1501 tggctgatga cctcgggact ggcagccacc actccaggtt gtttacggat ctgtaggagc
     1561 acgtttcgcc agtcatccag ccgcaacccg gcgccatagg taagaatccg caggtgcgga
     1621 ttggccacga ggatccgttc ccggagatca tcgcgaagcc cattcatgac gccgagcaca
     1681 acgatgagcg ccgtaacacc gaccgcgaca cctccagtgg agattacggt gttcaatgag
     1741 gcggtccgag aatttctgcg gctgcggagg tatcggcggg cgattctcca ttccagtttg
     1801 gacggccaac ggaaggtggc ggtcagctcc cgcgcggcag cccgccaccg ctgtaccatg
     1861 ggtggcctac cgctgcgggt tggttgcccc actgccccac tctcctgctg cgctatcgtc
     1921 atgtgccttc cggccgcatc gcgggaaaaa gaatgacatc ccggatcgat ggctgacccg
     1981 cgatgatcat catcaatcga tcgatgccga ggcccatacc cccggccggt ggcataccgt
     2041 attccagcgc tctgatatag tcggcatcgt agctgtgcgc ctcggcgtcg cctttcgccc
     2101 gttcttgcgc ctgctcctga aaccggcgtc gctgatcgtc gggatcgtta agctcgctga
     2161 acgcgttggc cagctcccgc ccaccgatga agagctcgaa ccgctcggtc aaccagggat
     2221 cgttgcggtg ctccttggcc aagggggaga gcgccttcgg atagtcgacg acaaaggtcg
     2281 gctggatcag atcgggctcg accagggtct tgaagacctc gtcctgcaga cgagggccgg
     2341 aaagagcgcc caaggcctcc ggctcgctcc ccgctcgttg cagaacaccg cgcatctcgg
     2401 cgtccgaggc tacccggaga tcgagcttcg cttgttgctg aaccgcgtcg aggaatcgaa
     2461 cccggggaaa tggcggagtg aagtcgagcg tggtaccgaa gcgctccagc cgccgggtgc
     2521 cgacgcagtg ctccactgtg ccacagacca gtgcctccgt cagccgcatc atgtcctcgt
     2581 aatcggcgta ggcctggtac agctcgagca tcgtgaattc cgggttgtgg gtccgatcca
     2641 tgccttcgtt tcggaagtca tggccgatct cgtatacccg ctcgaatccg ccc
//
LOCUS       DASRPQ010000356         1094 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1293001, whole genome shotgun sequence.
ACCESSION   DASRPQ010000356 DASRPQ010000000
VERSION     DASRPQ010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1293001"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..608)
                     /locus_tag="VFD73_04130"
     CDS             complement(<1..608)
                     /locus_tag="VFD73_04130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73208.1"
                     /translation="MSSTPPLRSVSDSSYRLTDEPLGLVRLVVGTLALIGTVLAVVVA
                     LVAREPRALKLVGALWAVYGLVVGFVSGVLEPVIDGFFQLLANAGLMRAGGGYSSVET
                     LVARGHLDAAAEAYAERARNPAERAEATLRRAALLAGPLGEPETAAIELDNLRASHLS
                     KRDDFRVGLALVELYEHHLADPGRAMSELRRLIDRYPTAQDAR"
     gene            781..>1094
                     /locus_tag="VFD73_04135"
     CDS             781..>1094
                     /locus_tag="VFD73_04135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73209.1"
                     /translation="MRAVVIALLALLPGLQVAAQEVAEESPPAPWRTSYFPYLSGGSN
                     DGPVLSFRVRYWQAAEYEDRVTANAALNAEAGITPRGGRHAYVQFRAPQLLEGWRFDA
                     KIG"
BASE COUNT          208 a          370 c          349 g          167 t
ORIGIN      
        1 cgggcatcct gggcggtggg atatcgatcg atcaagcggc gcaactcgct catggcgcgt
       61 ccaggatccg caaggtgatg ctcatacagc tcaaccagcg ccagacccac ccggaagtca
      121 tcccgcttgg acaggtgcga cgcccggaga ttatcgagct ctatggccgc ggtctccggc
      181 tcccccagcg gtcctgctag caaagcggcc cggcgcaggg tggcttcggc acgctccgca
      241 ggattccgcg cgcgctcggc atacgcttcg gcggccgcat ccaggtggcc gcgggcaacc
      301 agggtctcga cgctggagta gcctccgccg gcacgcatca gtcccgcgtt ggccagtagc
      361 tggaagaaac catcgatcac cggctccaac acaccggaca cgaacccgac gacgaggccg
      421 tagactgccc acagcgcacc aaccagcttc aatgcccggg gctccctggc caccagcgca
      481 accactacgg cgagcacggt gccgatgagc gcgagagtac ccacgaccag gcgcacgagt
      541 ccgagcggct catcggtgag ccgataggaa gaatcagaga cactgcgcag tggaggagtg
      601 gagctcaagc cgacaagtta gggagcgcgt ggggagcgag caagcgacat gctctcagtt
      661 gactttcgct tcttgccggg cctaaatccc cgcagagcag tcatcgcact cctgcgctga
      721 atgcaccctg ggaggctcca tgtcacggcc gatcgagtcg gttgcaaaga ggcccgtctg
      781 atgcgcgcgg ttgtcatcgc actgctcgca ttactccccg gactgcaagt agccgcgcag
      841 gaggtggctg aagagtctcc ccccgcgccc tggcgtacca gctacttccc ctacctgagc
      901 ggcggctcga atgatgggcc ggtcctgagc ttccgcgttc gctactggca ggcggccgag
      961 tacgaggatc gggtcaccgc caacgccgcg ctcaatgccg aggccggcat cacgccgcgc
     1021 ggtggacggc atgcctacgt gcagttcaga gcgccccagc tcctggaggg ctggcgcttc
     1081 gatgccaaga tagg
//
LOCUS       DASRPQ010000357         1022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1293108, whole genome shotgun sequence.
ACCESSION   DASRPQ010000357 DASRPQ010000000
VERSION     DASRPQ010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1293108"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(708..>1022)
                     /locus_tag="VFD73_04140"
     CDS             complement(708..>1022)
                     /locus_tag="VFD73_04140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73210.1"
                     /translation="EDVNVAIERTDGTTASFLKELIRRSVLESLHGDPVLTAVTGTHL
                     TRALDDLLDAAQAVTRTLLGVGVDPADLPAGGVLQAGQAPGAMMAYRRQVMVPRMGHF
                     RG"
BASE COUNT          175 a          335 c          315 g          197 t
ORIGIN      
        1 ctgaggcctc acgccaagcc aatgccctac tgggtctccg gaatctaccc catgactgcc
       61 caccagcgtt cgaattatgc tgtctagctg ggagccgcct atcggaatcg aaccgatgac
      121 ctacgcatta cgagggtgtc accgtgcgtt gctcgcgagc tcaaaaccgg ggctagcttc
      181 atgttcgcag gtagctgatg gtggcgatcg ttggcaattg atggcagttc ggggacatgt
      241 cggggacacg ggtccgtaat gcgtaggcca cgttctcggc gggacggcgc tgtcgaacga
      301 ccttccgctt caggccggac atatccccag ttggcgcaga tcgtgcgaat gctatgcgct
      361 gtggccggtc gccgctgtca gcggttggct gctgctgttg ctgtcagcca cagccgattc
      421 ggaggtgtca ggccgggacc caggcctcag atcctacgcc cgcaccaggt caaaaccccg
      481 caagccgggc cgcggtccga ggactatcta catcctccct gccgattacg cgcttcacgg
      541 atctccagcg cagcaaccac aagcgatgcc catatcaacc agttctgtgc accgccgccg
      601 atctgtcccg aagcaattac cgccgtacaa aacggcagtt cgggcacgtt tcagttcgac
      661 gtccattgct tgccgtttag cttattggtt tgtcttttcc ccggagttca gccgcggaag
      721 tggcccatgc gcggcaccat cacctgacgg cggtaggcca tcatggcgcc gggcgcctgg
      781 ccagcctgca gtacgccgcc ggctggcagg tcagccgggt cgacgcccac gcccagcagg
      841 gtgcgggtca ccgcctgcgc ggcgtcgagc aggtcatcga gcgcccgggt caggtgcgtt
      901 ccggtgaccg cggtcagcac cgggtccccg tgcagtgact ccaggacgct gcgccggatc
      961 agctccttga gaaaggacgc cgtggtaccg tcagtgcgct cgatggcgac gttcacgtcc
     1021 tc
//
LOCUS       DASRPQ010000358         4445 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3486708, whole genome shotgun sequence.
ACCESSION   DASRPQ010000358 DASRPQ010000000
VERSION     DASRPQ010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4445
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3486708"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1289
                     /locus_tag="VFD73_04145"
     CDS             <1..1289
                     /locus_tag="VFD73_04145"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HZI73211.1"
                     /translation="EIPMPRKCSAKPSRTAVPALRVLGWCASLAVAFPATDLLAQDSV
                     SHAPPRDSAAQFTAAAPDSLPRTHTVRKGDTLWDLAQFYLKDPFLWPSIYRINTDVVE
                     DPHWIYPGEVLRIAPVDNLAAVPTMDTPLPESAKDSAALAADSARGLNGDSTDALARG
                     PQQPSSAEGEDTDRQPLFPERQARSVAEILKAYTHQPYRPLRRSEFYSSGFLTENQHL
                     PYGKVLGPVTPPQIRATHSAANAMPFTTVAIEAPHGSTYQVGDSLLLLQLGKELEPYG
                     NVVVPTGVVKITEITDGHYLGNIVSTYGPIRNGQLTLPIESFSSGSGAHAVAVSDGVR
                     GSLIGGMGRQDLKEPQMVVFINKGREDGVAPGDLFEIRRRPSHAPDGTVRVNEVMATM
                     QIVHVRDHTATGILLSVVSPDIAPGTDVMQVAKLPS"
     gene            1581..2519
                     /locus_tag="VFD73_04150"
     CDS             1581..2519
                     /locus_tag="VFD73_04150"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HZI73212.1"
                     /translation="MLVTGGAGFIGSHIAEAYLREGWEVVVLDDLSRGQERNVPKGAR
                     FVRADIRSPDARQTVASGRFDVVNHHAAQIDVRVSVDQPAFDSQINVVGLVNLLEGAG
                     QGGVRRFIFASSGGVVYGDPEIIPTPETAPKLPISPYGVSKLSGEYYLRAIGALRGFE
                     GIAMRYANVFGPRQDPKSEAGVVSIFVSRLLEKQPLTVFGDGKQTRDYVYVKDVARAN
                     VLASTAPSIAATSLDAPAFNIATSKQRSVLELAASVGDVMRQKPTLEFAPPRAGELLR
                     SALDVSKAKKVLGWTPQYVFEDGLRELVDWFKKEAK"
     gene            2516..3226
                     /locus_tag="VFD73_04155"
     CDS             2516..3226
                     /locus_tag="VFD73_04155"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HZI73213.1"
                     /translation="MIQQSGAVPQSSLDLVLSSSPETKVVLLVTALFSLVSWFIIILK
                     WWQFRKLNRQADRFFTEMERTTRLKDAYHAVMKLPPSPYNRLFREAVTFYSELRPGAL
                     RDERGADRSSLSMTQLEALKMVLGKEVAAERDLLGHYIPWLATIGSVSPLLGLTGTVL
                     GIMSAFIGISSKGSGNLAAVAPGVAEALVATFAGLVAAIPAVITYNLYVNRVRLFAGE
                     LEGFANELIGTMAREGLV"
     gene            3227..3658
                     /locus_tag="VFD73_04160"
     CDS             3227..3658
                     /locus_tag="VFD73_04160"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HZI73214.1"
                     /translation="MAVGLGGGLGSQRGELPLMADVNVTSLVDVMLVLLIIFMITAPI
                     MQGGVDVELPRAEARPLSPKEGMVVTVNRDGRIFIDQTPVSYTDFRVTFRSLVATRKP
                     TGVYLQADARVPYGDVVRVLAVIRTAGVQNVGLVAAEEESS"
     gene            3655..4347
                     /locus_tag="VFD73_04165"
     CDS             3655..4347
                     /locus_tag="VFD73_04165"
                     /inference="COORDINATES: protein motif:HMM:NF024503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB C-terminal domain-containing protein"
                     /protein_id="HZI73215.1"
                     /translation="MNVRSAERQPPGRAAGLVGTILVHAAAVSFLFTTVKATKASPPS
                     YAVDLVAAPAPSQKRLAREALPTPPPEEKPAPVKPAPPKPVKTPAPPKQKPPPPTEVK
                     KEPPPKTAAPATPAEGETPSTGSDVATIKTPGLAFPYPEYLRNIVTQVYQRWERGSGE
                     QRNFAEISFFILRDGSVRDIHFVTRSGSFAFDLNAQGAIEAAGNSRAFGPLPDGWEAD
                     VLPVSFYFKPTQ"
BASE COUNT          795 a         1386 c         1420 g          844 t
ORIGIN      
        1 gggagattcc gatgccgcgg aagtgttctg caaagccgag ccggaccgct gtccctgccc
       61 tccgggttct ggggtggtgt gcgtctttgg ccgtagcatt ccccgccacg gacctcttgg
      121 cacaagattc cgtcagccac gcgccgccac gcgatagtgc tgcccagttc acggcagcgg
      181 caccggactc cttgccgcgg actcacaccg tccgcaaggg agacaccctc tgggacttgg
      241 cccagttcta cctcaaggat cccttcttgt ggccaagcat ttatcggatc aacacggatg
      301 tggtggagga cccgcactgg atctatcctg gtgaggtcct ccggatcgct ccggtcgaca
      361 acctcgctgc cgttcccaca atggacacgc ctcttccgga gtcggccaag gatagcgccg
      421 ctctggcggc cgatagcgcc cgcggactca acggcgattc caccgatgcg ctggcgcgag
      481 ggccgcagca gccgtccagt gccgaaggcg aggataccga tcggcagccg ttgtttccgg
      541 aacggcaagc acgctctgtc gccgagatcc tcaaggcgta tacgcatcag ccttatcgcc
      601 cacttcgcag aagcgagttc tattcttcgg gctttttgac cgagaaccag cacctgccct
      661 acggcaaagt gctcgggccg gtaacgccgc cccaaatcag ggccacgcat agcgcggcca
      721 atgccatgcc gttcaccacg gtcgccatcg aagcgccgca cggttcgact taccaggtgg
      781 gagatagcct gcttctgctg caactcggga aggagctgga gccctacggc aacgtggtcg
      841 tgcctactgg ggtcgtgaag atcaccgaaa tcaccgatgg gcactacctg ggcaacatcg
      901 tttcaaccta cgggcctatc aggaatgggc agctgactct tccgatcgag agcttcagct
      961 ccggctccgg cgcgcatgct gtagcggttt cggatggcgt ccggggaagt ctcattggtg
     1021 ggatggggcg tcaggacctc aaggaaccgc agatggtcgt gttcatcaac aagggacgcg
     1081 aggatggggt cgcaccggga gatctgtttg agatccgccg ccggccttcg catgcgcctg
     1141 acggcaccgt gcgggtaaac gaggtgatgg cgacaatgca gatcgtgcac gtccgcgatc
     1201 ataccgcaac cggaatcctt ttgagcgtcg tgtcgcccga tatcgcgccg gggacggatg
     1261 tgatgcaggt ggctaaactg ccttcgtaag cggggcagcg gggcagcggg aaaggaactg
     1321 agtctatcag cgggaggacc gaaaccagcg cggtttcggt cctctccgct ttcatatgac
     1381 catcaggatc agtccgatct gagcatttga tctccctggc tgccccgctg cctcgccgcc
     1441 ccgctgcccc gctgactacg gttccttcct cgaaccccgc ctctatattg cggggcgctg
     1501 ttgcagggcg cttcccagtg gtcacccaat caacgttggt aggagttggc aatgcaaaga
     1561 cgccggatat gagcggcaga gtgttagtca ccggtggcgc cggttttatc ggctcgcaca
     1621 tcgcggaggc atatctccgg gaaggatggg aggtggtcgt tctcgatgac ctatcgcgcg
     1681 ggcaggagcg gaatgtgccg aagggtgccc gcttcgtgcg cgcggacatc aggtcccccg
     1741 acgctcggca gacggttgcc tcagggcgat tcgacgtggt caatcaccat gcggcacaga
     1801 tcgacgttcg cgtctccgtc gatcaacctg ccttcgacag tcagatcaat gtcgtgggtc
     1861 tggtgaattt gctggaaggc gcgggacagg gcggcgttcg gcgcttcatc ttcgccagca
     1921 gcggcggggt cgtctatggt gatcccgaga ttattcccac gccggagacc gctcccaagc
     1981 tgccgatctc accctatggg gtgagcaagc tctccggcga gtattacctg cgcgcgatcg
     2041 gcgcgctccg gggcttcgaa gggatcgcca tgcgctacgc caacgtgttc ggtccccgcc
     2101 aggatcccaa atccgaggca ggggtcgtgt cgatcttcgt gtcccgtctt ctggagaagc
     2161 agccgctcac tgttttcggc gacggcaagc agacccgcga ttacgtctac gtgaaggacg
     2221 tggcgcgggc caatgttctg gcgagtaccg cgccatcgat agccgccacg agtctagacg
     2281 cgccggcatt caacatcgcc acctcgaaac agcgcagcgt cctggagctg gccgcctcgg
     2341 tgggtgacgt catgcggcag aagcccaccc tggagtttgc ccctcctcgc gccggcgagc
     2401 tgctccgcag cgcgctggac gtcagcaaag ccaagaaggt gctgggctgg acgccacagt
     2461 atgtcttcga agacggattg cgtgagctgg tcgactggtt caagaaggag gcgaagtgat
     2521 ccagcaatca ggagcggtgc cccagtcgtc gctggacctg gtactgtctt ccagtccgga
     2581 gaccaaggtc gtgctgctgg tgacggcgct gttctccctg gtctcctggt tcatcatcat
     2641 cctgaaatgg tggcagttcc gcaaactgaa ccggcaggct gaccggttct tcaccgagat
     2701 ggagcgcacc actcggctga aggacgccta tcacgccgtc atgaagctgc caccatcgcc
     2761 ctacaaccgt ctctttcgcg aggcggtcac cttctattct gagctccgcc cgggcgccct
     2821 gcgcgacgaa cggggggccg atcggagctc gctgagcatg actcagctcg aggcgctcaa
     2881 gatggtgctc ggaaaggagg ttgccgcgga gcgtgacctc ctgggccact acatcccctg
     2941 gctggccacg atcggctcgg tgagccccct gctggggctc accgggacgg tgcttggcat
     3001 catgagcgcc ttcataggca tctctagtaa ggggtccggc aaccttgccg cggtcgcccc
     3061 gggggtcgcc gaggcactgg tggcgacgtt cgccggtctg gtcgcggcga ttccggcggt
     3121 gatcacctac aacctgtatg tcaaccgggt gaggctcttc gctggagagc tcgaggggtt
     3181 cgccaacgaa ctaatcggga cgatggcccg ggaaggtctg gtctaaatgg cagttggtct
     3241 tggaggcggc ctcggcagtc agcgtggcga gctgccgctc atggcggatg tgaacgtcac
     3301 ttcgctggtc gatgtcatgc tggtcctgct gattattttt atgatcacgg caccgatcat
     3361 gcagggcggg gtcgacgtcg agcttcctcg tgcggaggct aggcccctca gtccgaaaga
     3421 ggggatggtg gtgactgtga accgcgacgg ccgcattttc atcgatcaaa cgccggtgtc
     3481 ctacaccgat tttcgggtga ccttccgctc tctcgtcgcg acccgcaagc ccactggagt
     3541 gtacctccag gcggacgctc gggtccccta cggagatgtg gtacgggttc tggcggtcat
     3601 tcgtaccgcc ggagttcaga acgtgggcct ggtcgctgcc gaggaagaat cgtcgtgaac
     3661 gttcgttcgg ccgaacggca gccgccgggg cgggcggccg gtttggtcgg gacaatcctg
     3721 gtgcacgcgg ctgcggttag ctttcttttt acgacggtca aggcgaccaa ggcttccccc
     3781 ccatcctacg cggttgacct ggtagcggcg ccagcccctt cccagaagcg gctggcccgc
     3841 gaagcgctgc cgacgcctcc accagaggag aaaccggctc cggtcaagcc cgcgccgccg
     3901 aagccggtca agactccggc gccgccgaag cagaagccac cgccgcccac cgaggtcaag
     3961 aaggagccac cgcccaagac ggcagctcca gcgacaccgg cggagggaga gacgccgagc
     4021 accggcagcg acgtcgccac gatcaaaacg ccgggactcg cctttcccta tcccgagtat
     4081 ctgaggaaca tcgtgacgca ggtctatcag cgatgggaac gcgggtcggg cgagcagcgg
     4141 aactttgccg agatcagctt tttcatatta cgggacggct cggtgcgcga cattcacttt
     4201 gtgactcgct cgggcagctt cgcctttgat ctgaacgctc agggtgccat cgaagcagcc
     4261 ggcaacagcc gagcgttcgg cccgctcccc gatggctggg aggccgacgt gttgccggtc
     4321 agcttctact tcaaaccgac acaatgacca agacctttct tctgagcatg tcggcaatcg
     4381 ttttcgccgg acccgtggtc gcgcaggaca cgacccgggt ggatcaaggg gtgcggatcg
     4441 gggtc
//
LOCUS       DASRPQ010000359         7485 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_39098, whole genome shotgun sequence.
ACCESSION   DASRPQ010000359 DASRPQ010000000
VERSION     DASRPQ010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7485
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39098"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..767
                     /gene="metK"
                     /locus_tag="VFD73_04170"
     CDS             <1..767
                     /gene="metK"
                     /locus_tag="VFD73_04170"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004083625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HZI73216.1"
                     /translation="AVRKGLNGHPRIDWLRPDGKSQVSVEYEGDRPVAVRTVVVSTQH
                     AERNGSRQLAHRTIKEAVIEEVIQPVLESAGLEPHRTKFLINPTGRFVIGGPHGDAGL
                     TGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARWVAKNIVEAKLARRCEVQLA
                     YAIGVAEPVSVMVQTFGTGALPDTRLEKMVLEVFDLTPRGIIDALRLKRPIYRPTASY
                     GHFGRKPRIRDYDGKKVDLFTWEQPDRVKDLLSAAR"
     gene            775..2118
                     /gene="ahcY"
                     /locus_tag="VFD73_04175"
     CDS             775..2118
                     /gene="ahcY"
                     /locus_tag="VFD73_04175"
                     /inference="COORDINATES: protein motif:HMM:TIGR00936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004013 - adenosylhomocysteinase activity
                     [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HZI73217.1"
                     /translation="MPVQTAAASYDIKDIALADEGKRRTEWAERSMPVLRQIRARFAK
                     ERPLKGLKLSACLHVTTETANLMQTLRAAGADIALCASNPLSTQDDVAAHLVRDHGVH
                     VYAIKGEDHRTYYGHIAQALAFGPHMTQDDGADLVGSLHMIALNRLDDLAPPIREWVE
                     GLSAAERKALVGGVRGSTEETTTGVIRLKAMAKEGVLQFPIIAVNDSNTKHMFDNRYG
                     TGQSTLDGVVRATNLLLAGSTVVVAGYGWCGRGVASRARGAGAHVIVTEIDPLPALEA
                     RMDGFEVMPMADAAPRGDLFITLTGNIHVVRPEHFSAMKDGAIVCNSGHFNVELDLEG
                     LARISSGRRYVREMVEEFVVKGKRIMVLAEGRLINLAAAEGHPASVMDMSFANQALAA
                     EVLAKESATMSKAVHRLPASVDQEIARLKLQSMGVAIDSLTPEQVEYLASWDAGT"
     gene            2128..2619
                     /locus_tag="VFD73_04180"
     CDS             2128..2619
                     /locus_tag="VFD73_04180"
                     /inference="COORDINATES: protein motif:HMM:NF014618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nuclease family protein"
                     /protein_id="HZI73218.1"
                     /translation="MIEVTVAHLGLDRTTNTPVVILREKEGSRVLPIWIGPAEASAIA
                     MELQGMKAQRPLTHDLLKQILVGLGGDLRRVVISAVKENTYFAELLIRRDDHVFQVDA
                     RPSDSIALALRMRAPIFTSDQLLDQSGVETDEPSPNPSLEADKLKDYLEKMDPQDFGK
                     FNP"
     gene            2660..3739
                     /locus_tag="VFD73_04185"
     CDS             2660..3739
                     /locus_tag="VFD73_04185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73219.1"
                     /translation="MLSAFSTLPTLSAQTRATGRVLNGDSVPLAGIRVVLHRVGQDTQ
                     GPIDSTRSDRDGRFRFSFHADTAAFYLVSGRYAGIEYFSNPVATNPHRPDSAVTVVVY
                     DTSSTAPVVMEARHLVVTRPGENGDRGVLDLVILKNTGRRTRIASDSLHPSWSIPLPS
                     GTIGLDVGESDISAGAVARRGDSLLISAAISPGEKQLTLQYEIPAGTESIRLAIRNPG
                     VTINVLAEEPGTRVAGPGLALADSQVIQGRSFRRWTGRVSATGVVRIAVPRRPTTPRW
                     VLYALVGGLGLGLAAAAWRLLTRKPAAQPRPTDSLVSAIAELDARYLGRQEEVGEEEW
                     QSYQMRRAQLKAELEASLAGGGWSP"
     regulatory      3783..3906
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            4007..4933
                     /locus_tag="VFD73_04190"
     CDS             4007..4933
                     /locus_tag="VFD73_04190"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helical backbone metal receptor"
                     /protein_id="HZI73220.1"
                     /translation="MGEIISPTPLVRSRRPIAARVVFFWMLSAIAGGCAKPPRGTAAI
                     TVIDDAGDSVRLKAPARRVVSLIPAATELLFAIGAGPTVVGRTAYCDYPPAAAAVPNL
                     GDGIKPSIEAILARHPDLVVLYNSGQNAGVAGRLSELGIPALRINTDALRDVDRIGRM
                     LGTMTGHQTEAESLATVFDSALVNATVRPAGPRPKVLLLVWEQPPMTIGRGSFLSELV
                     ERSGGENLFQDVTASSGVVSVEAVAARNPDLIFTTTEGPISFATRPEWQVVPAVRKHR
                     FLRVSGSEFNRPSPRAPAAIRELAAKLRTVGR"
     gene            4930..5907
                     /locus_tag="VFD73_04195"
     CDS             4930..5907
                     /locus_tag="VFD73_04195"
                     /inference="COORDINATES: protein motif:HMM:NF013219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HZI73221.1"
                     /translation="MNRARVALLLALGVLGCVLLGLSVGSVSIPLREVWDALWHSGGS
                     NAAIIRELRAPRVVLAFLVGGSLGVCGAALQAMIRNPLAEPYLLGLSSGAGLGAVVAI
                     ASRAGSAWSIPAAAFAGALLTVALVYRLSLVSGRRLDPHVLLLSGVVVGAFAGALMSA
                     IMVLSDAPGVRNAFLWLLGGFGTASWGALLVFAAYAILPLALLFFYARSLDLIALGDE
                     PAQHLGAEVDRIRRMVYLSTALLTAASVATCGIVGFVGLVVPHAVRTRFRPLHRTLLP
                     LVFLVGGCFLVLADVVSRVAVRPLELPVGVVTALVGVPVFALLLRRTLA"
     gene            5904..6695
                     /locus_tag="VFD73_04200"
     CDS             5904..6695
                     /locus_tag="VFD73_04200"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI73222.1"
                     /translation="MILVARDVTARYRPQQAAALQSVTCEVAGAELVAVVGPNGSGKT
                     TLMRAMLGLVRLERGTVLIDGRPLREWSRRALARTVGVVGQQEEPVFPLSVAETVMLG
                     RYAHLGPVDPPGARDRRAVAAALERCDIADLSSRSVDTLSGGEWQRVRIARALAQEPR
                     ALILDEPTASLDVRHEMELFELTRGLVRDGLASLVITHHLNLAARFADRIVLLNSGAV
                     VAAGSPNDVLDQDMLSRVFQWPVAVTTWQDGSPQIVPLRTGERRP"
     gene            6722..>7485
                     /locus_tag="VFD73_04205"
     CDS             6722..>7485
                     /locus_tag="VFD73_04205"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HZI73223.1"
                     /translation="MNSPLPRTLTLVLAVVLVNSGQAFAQEAQDTTTLKELVVTANRL
                     PTPADAVTASVTVITGDQLRSGGLRFVQDALRDVPGANVVQAGSYGGVSSLFLRGGES
                     DYVKVLIDGVPVNQAGGSFNWANLTTDNVDRIEVLRGPASVVYGSDAVTGVVQIFTRT
                     GQGPAALEGSAEAGSFGSVNGRAGILGGSERLSYSLEGSRISTDGTYPFNNNYGNTVI
                     SSRVRARPDEKSDVSLSARWSDNRYRFPTDFSGALA"
BASE COUNT         1260 a         2410 c         2451 g         1364 t
ORIGIN      
        1 cagcggtccg aaagggactg aacggacacc ctcgcatcga ctggctgcgg ccggatggaa
       61 agtctcaggt gtcagtcgag tatgaaggcg accgtccggt cgccgtccgc accgtggtgg
      121 tctcgaccca gcacgccgag cgcaacggtt ctcggcagct ggcacatcgt accatcaaag
      181 aggcggtgat cgaagaggtg attcagccgg tgctggagag cgccggactg gagccgcacc
      241 gcaccaagtt cctgatcaac cctacgggcc ggttcgtcat cggcggaccg cacggcgacg
      301 ccggtctgac cggccgaaag atcatcgtgg acacctacgg cggcatggca cgccacggcg
      361 ggggggcgtt cagcggaaag gacccgtcaa aggtcgaccg ctcggccgcc tacgcggctc
      421 gctgggtggc caaaaacatc gtggaagcaa agctggcccg acgctgtgaa gtgcagctcg
      481 cctacgcgat cggagttgcc gagccggtct ccgtcatggt gcagaccttc gggaccggag
      541 ctctccccga taccaggctg gaaaaaatgg tgctggaggt cttcgatctg accccgagag
      601 ggatcatcga cgccctccgg ctcaaacgcc ccatctatcg tccgaccgcg agctacggtc
      661 acttcgggcg gaaacccagg atcagggatt atgatggtaa gaaggtggat ctcttcacct
      721 gggaacaacc cgatcgcgtg aaggacttgc tgtctgccgc ccgctgagga gcttatgccc
      781 gttcaaaccg ccgctgccag ttacgatatc aaagacatcg cgcttgccga cgaaggaaaa
      841 cgccgtaccg agtgggccga acgctccatg ccggtgctcc ggcagatccg ggcccggttc
      901 gccaaggagc ggccgctcaa agggctcaag ctctccgcct gtctccacgt gaccacagaa
      961 acggccaatc tgatgcagac gctgcgggcc gccggcgccg acatcgctct ctgtgcctcg
     1021 aatcccctgt cgacccagga cgatgtggcg gcgcatctgg ttcgggatca cggggtccac
     1081 gtctacgcga tcaagggcga ggaccaccgg acctactacg gccacatcgc ccaggcactc
     1141 gccttcggtc cgcatatgac ccaggacgac ggcgccgatc tggtcgggtc actccacatg
     1201 atcgcgctca accgcctgga cgatctggcg ccaccgattc gcgagtgggt ggaaggcctt
     1261 tccgccgctg agcgcaaggc gctggtgggc ggggtccggg ggtcgaccga ggagaccacc
     1321 accggcgtca tccgcctcaa ggcgatggcc aaggaggggg tactccagtt ccccatcatc
     1381 gcagtaaacg actccaatac caaacacatg ttcgacaacc ggtatggtac cgggcaatcc
     1441 acgctggacg gggtcgtccg ggcgaccaac ttgctcctgg cgggcagcac ggttgtcgtg
     1501 gccggctacg gttggtgcgg taggggagtc gccagcaggg cccgaggggc gggggcccac
     1561 gtcatcgtga ccgagatcga tccgcttcct gcactggaag cgcggatgga cggcttcgag
     1621 gtcatgccga tggccgacgc ggctcctcgc ggcgatctct tcatcaccct caccggcaac
     1681 atccacgtgg tgcgcccgga gcacttcagc gcgatgaaag acggggccat cgtctgcaac
     1741 tccggccact tcaacgtcga gctcgatctc gaagggctgg cccggatttc ctccggccgg
     1801 cgctatgtgc gagagatggt cgaggagttc gtcgtcaaag gcaaacggat catggtgctg
     1861 gccgaaggtc gcctgatcaa tctggccgcc gccgaaggac accccgccag cgtcatggac
     1921 atgtcatttg cgaaccaggc gcttgccgcc gaggttctcg ccaaggagtc ggcgacgatg
     1981 agtaaggccg tccaccgtct ccctgcatcg gtggaccagg aaattgcgcg actcaagttg
     2041 cagagcatgg gtgtggcgat cgattcgctc acgccggagc aggtcgaata cctcgcgagc
     2101 tgggacgccg gtacctgagc tgagttgatg atcgaagtca ccgtcgcgca tctgggcctg
     2161 gatcgaacca ccaatacgcc cgtcgtcatt cttcgggaga aggaaggctc gagggtgctg
     2221 ccgatctgga tcggaccggc ggaggcaagc gcgattgcca tggagctcca gggcatgaag
     2281 gcccaacgcc cgctcactca cgatctgctc aagcagattc tggtgggcct gggtggcgat
     2341 cttcgccggg tggtgatcag cgccgtcaag gagaacacct acttcgccga gctcctgatc
     2401 cgccgggacg accatgtgtt tcaggtggac gccagaccct cggacagcat cgccctcgcc
     2461 ctccgcatgc gggcaccgat cttcaccagc gatcagttgc tcgaccagag cggggtcgag
     2521 accgacgagc cgtcgcccaa cccgtcgctc gaggccgata agctgaagga ctatctcgaa
     2581 aagatggatc ctcaggattt cgggaaattc aatccgtaga gcggggaggg cggtcgttcc
     2641 gatccttctc gctcttgcag tgctctccgc cttttccact cttccgaccc tttccgccca
     2701 gactcgcgcc accggccgcg tcctgaatgg cgactccgtt cctctcgccg gaattcgggt
     2761 cgtcctccac cgcgtgggtc aggatacgca gggaccgatc gactccaccc gatccgaccg
     2821 ggacggcaga tttcgcttca gcttccacgc cgacaccgcc gcattttatc tggtaagcgg
     2881 caggtacgcc ggaatcgagt acttctccaa tccggtcgcc accaatcccc atcggcctga
     2941 ttccgccgtc actgtcgtgg tctacgatac ctcgagcact gctccggtgg tcatggaagc
     3001 gcggcacctc gtggtgacca ggccgggcga gaatggagac cgcggcgtgc tggacctcgt
     3061 cattctcaag aacaccggcc ggcgtaccag gatcgcctcc gatagcctcc acccgtcgtg
     3121 gagtattccg cttccctcag gcacgattgg gctggacgtc ggcgagagcg acatctccgc
     3181 tggggccgtt gccaggaggg gagattcgct cctcatctcg gccgccatct cgccgggaga
     3241 gaaacagctg acgcttcagt acgagattcc tgcgggaacc gagtcgattc gactggcgat
     3301 tcgaaatccg ggcgtcacca tcaacgttct tgccgaagag ccggggacca gggttgccgg
     3361 accggggctg gcgctcgccg atagtcaggt gatccagggc cgctcgtttc ggcgctggac
     3421 cggcagagtg tcagcaacag gtgtcgttcg aatcgcagtg ccgcgccgtc cgacgacgcc
     3481 acggtgggtt ttgtacgctc tggtgggcgg acttgggctg gggctcgccg cagcggcctg
     3541 gcgtctcttg accaggaagc cggccgccca acctcgtccg accgactcgt tggtgtccgc
     3601 catcgctgag ctcgacgcgc gctatctcgg ccgccaggag gaggtcggcg aggaggagtg
     3661 gcagtcgtat caaatgcgcc gagcgcaact gaaagcagag ctggaagcat cccttgcggg
     3721 aggcggctgg agtccataga ctagcgtgca ggacaatcga accaacacga acggggctac
     3781 tcggaagccg gtgcaaatcc ggcgcggccc cgccactgta acgggagcct ggctgtgagc
     3841 caggcgctcc actcacgaag ccactgggaa accgggaagg cgagtggagt cccgaagcca
     3901 ggagacctct ccgttcgtgc caccacagaa gccctcgggg gagggtcggt ggcgtgtcgg
     3961 cggttccgct ccgtcgttca tcgcccattc ctcgaggcac gaagggatgg gcgaaatcat
     4021 ttcaccaacc ccgctggtcc gctcccgccg gccgatcgct gctcgggtgg tgtttttctg
     4081 gatgttgagc gcaatcgcag gtggctgtgc caagccgcca cgtggcaccg ccgcaataac
     4141 tgtgatcgac gatgccggcg acagcgttcg cctcaaggcg ccggcacgcc gggtcgtctc
     4201 cctcattccg gccgctaccg agctcctgtt tgccatcggc gcaggtccaa ccgtggtggg
     4261 ccgcaccgcg tactgcgact accctcccgc cgcggcagcg gttcccaatc tcggcgacgg
     4321 gatcaagccc agcatcgaag caatcctcgc ccggcacccg gacctggtag tgctctacaa
     4381 ctccggacag aacgccgggg tggcgggccg gctctccgag ttgggcatcc ccgccctccg
     4441 aatcaatacc gacgcgctcc gagacgtgga cagaatcggc cggatgctgg gcaccatgac
     4501 gggccaccag accgaagccg aatccctcgc aaccgtcttt gatagcgcat tggtgaatgc
     4561 caccgtgcgt ccagcgggac ctcggcccaa ggtgctgcta ctcgtctggg agcagccacc
     4621 gatgaccatc ggccgcggca gtttccttag cgagctggtt gaacgatcgg gcggagagaa
     4681 cctgttccag gacgtgaccg cgtcgtccgg cgtggtgagt gtcgaggctg ttgccgcccg
     4741 gaatcctgat ctgattttca ccaccaccga aggccctatc agctttgcca ctcgtccgga
     4801 gtggcaggtc gtgcccgcgg ttcggaaaca tcgcttcctt cgagtgagcg gatcggagtt
     4861 caatcggccg agcccgaggg cgccggctgc catccgggag ctcgccgcca agcttcgcac
     4921 ggtgggccgg tgaaccgggc gcgggtcgcg ctgctattgg cactgggagt gctcggctgt
     4981 gtgttgctgg gtctcagtgt cggatcggtc agcataccgc ttcgtgaggt ttgggatgcg
     5041 ttgtggcatt cgggcggaag caatgcagca atcatccggg agctgcgcgc cccccgggta
     5101 gttctggcgt ttctggtcgg tgggagtctg ggggtctgcg gtgcagcgct ccaggcaatg
     5161 attcggaacc ctctggcgga gccgtacctg ctgggactct ccagcggagc agggctcggt
     5221 gccgtggtcg cgatcgcgtc gcgggcagga agcgcctgga gcattccggc cgccgcgttc
     5281 gccggcgccc tgctcaccgt ggcactggtc taccgcctga gcctggtgtc agggagacgg
     5341 ctcgatcccc acgtactcct gctctcgggc gtcgtggtgg gcgccttcgc cggcgcgttg
     5401 atgagcgcga tcatggtgct ctccgatgca cccggcgttc gaaacgcatt tctctggctg
     5461 ctgggtgggt tcggcaccgc ctcctggggt gccctcctgg tcttcgccgc ctatgcgatt
     5521 ctcccgctgg ccctgctgtt cttttacgcc cgctcactcg atctgatcgc gttgggggat
     5581 gagccggcgc agcatctcgg cgccgaggtg gatcgcatcc gccgaatggt ctacctctcc
     5641 acagcgctgc ttacggcggc gagcgtcgct acctgcggga tcgtcggctt cgtgggcctg
     5701 gtggttccgc atgccgtgcg cacccggttc cgtccactcc accggacgct gctccctctc
     5761 gtgttcctgg tcggtggatg ctttctcgtt ctggctgacg tcgtctcccg agttgcggtg
     5821 cgtcctctgg agttgccggt tggggtcgtc accgccctcg tcggggtgcc ggtcttcgcg
     5881 ctgctgctgc gccggacgct ggcatgatcc tcgtggcccg agacgtcacc gctcggtatc
     5941 gcccccaaca ggcggcggcg ctgcagtcgg tgacctgtga ggtcgccggg gccgagctgg
     6001 tcgccgtggt cggtcccaac ggcagcggca agactactct gatgcgcgcg atgctgggcc
     6061 tggtccggct ggagcgcggc accgttctta tcgacggccg ccctctccgg gagtggtcgc
     6121 gccgagcact ggcccgaacc gtcggggtcg ttgggcaaca ggaggagccg gtctttccgc
     6181 tgagcgtggc ggagacggtc atgctgggcc ggtatgccca cctcggacca gtggatcctc
     6241 ctggtgcccg cgatcggaga gcggtagccg ctgcgctcga gcgatgtgac atcgctgatc
     6301 tgagcagccg ttccgtggat acgctctccg gtggggagtg gcagcgggtc cgcatcgccc
     6361 gggcactggc ccaggagccg cgcgcgctga tcctggatga gcccacggcg tcgctcgacg
     6421 ttcgccacga aatggagctc ttcgagctga cgcgcgggtt ggtgcgcgat ggtctcgcca
     6481 gcctggtgat tacccatcac ctgaacctcg ccgcgcggtt tgccgaccgc atcgtcctgc
     6541 tgaactccgg tgcagtcgtg gccgcgggct cgccaaacga cgtcctcgat caggatatgc
     6601 tgtcgcgggt ctttcagtgg ccggtcgcgg tcaccacctg gcaggacggc tcaccgcaaa
     6661 tcgttcctct ccgcacgggc gagcgccgcc cgtgatcctc tcattccagt tggagcgcac
     6721 catgaattca cctctccctc ggacgctcac cctggtgctg gctgtcgtcc tcgtcaatag
     6781 cgggcaggcc tttgcccagg aggcgcagga cacgaccacc ctcaaagagc tggtggttac
     6841 ggccaatcgt cttcccactc cagcggatgc cgtcaccgct tcggtcaccg tgatcaccgg
     6901 tgaccagctg cggtccgggg gactgcgctt cgtgcaggat gcgttgcgcg atgttccggg
     6961 ggcaaacgtg gttcaggccg gttcgtacgg cggcgtgagc tcgctgtttc tccggggagg
     7021 agagagtgat tacgtcaagg tgctgatcga tggcgttcca gtgaatcagg cggggggcag
     7081 cttcaactgg gccaatctga cgactgacaa cgtggaccga atcgaagttc tgcgagggcc
     7141 ggccagcgtg gtctatggct cggatgcagt caccggtgtc gtgcagatct tcaccagaac
     7201 ggggcagggg ccggccgcac tggagggaag tgccgaagcc ggcagcttcg ggagcgtcaa
     7261 cggccgagcc gggatcctgg gcggcagcga acggctgagc tattcgctgg aaggcagccg
     7321 catctctacc gacggcacct accccttcaa taacaattac ggcaatacag tgatcagtag
     7381 ccgagtccga gcccgacccg acgaaaagag tgatgtcagt ctatcggcac gttggagtga
     7441 caaccgttac cggtttccca ctgatttctc gggggccttg gccga
//
LOCUS       DASRPQ010000360         2918 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1293284, whole genome shotgun sequence.
ACCESSION   DASRPQ010000360 DASRPQ010000000
VERSION     DASRPQ010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2918
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1293284"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..638
                     /locus_tag="VFD73_04210"
     CDS             <1..638
                     /locus_tag="VFD73_04210"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HZI73224.1"
                     /translation="RDESFRDDLSPQAILDTIDAETESRAVIVSDVGQHQMWAAKLFP
                     YQRPGSHFTSGGLGTMGFAVPAAMGVAFARPGEPIWAISGDGGFQMNMQEIATMVQEG
                     IPVKMAVFNNGYLGMVRQWQQFFHGRRYSATPIWSPDYVRLAEAYGIAGWRVDSASTL
                     AESVRAAQAEPGPALVEFMIEQEANVYPMIPPGGSLSEPIENAPASPLVPA"
     gene            635..1141
                     /gene="ilvN"
                     /locus_tag="VFD73_04215"
     CDS             635..1141
                     /gene="ilvN"
                     /locus_tag="VFD73_04215"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: protein motif:HMM:NF008864.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HZI73225.1"
                     /translation="MTARQAVSVLLEDRLITLTRAVGLIRRRNLPVRSLAVGPGNTPG
                     ISRLTIMLQSDPATAERAVQHLQKVVGVHSAVAFPAGEGVTRELALVKVRVPSERYGE
                     LLDVIQLYKGSIIDDSPDAMIVEVSGSEAFILSCIRALERFGVVEIARSGTVALVPGS
                     DSQPRTLP"
     gene            1138..2238
                     /gene="ilvC"
                     /locus_tag="VFD73_04220"
     CDS             1138..2238
                     /gene="ilvC"
                     /locus_tag="VFD73_04220"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: protein motif:HMM:NF004017.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HZI73226.1"
                     /translation="MTAPVRMYYDADADRRRLTGRTFAILGFGSQGHAHALNLTESGA
                     QVLVGLRKNRPSWDRARAAGLEVRTADEAANAADVIMMLVPDQDARSVYEASVAPALK
                     AGKTLMFAHGFNIHYGEIVPPADVDVTMVAPKSPGHLVRSEFEAGRGVPGLVAVHQDA
                     SGEALANALAYASGIGCTRAGVIETSFREETETDLFGEQAVLCGGVTALVKAGFETLT
                     AAGYRPEMAYFECLHELKLIVDLMYRGGLQFMRYSISDTAEYGDYTRGPRVITPETRA
                     AMRRILDAVQDGSFAREWLAENQAGRHRFEQLRREDRDHDIERVGAKLRAMMPWSEEG
                     KRGEAAGQRSSQPEAQGQQPERPRRPAAPLPR"
     gene            2242..>2918
                     /locus_tag="VFD73_04225"
     CDS             2242..>2918
                     /locus_tag="VFD73_04225"
                     /inference="COORDINATES: protein motif:HMM:NF012550.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HZI73227.1"
                     /translation="MSRTLFDKIWDAHVVAQVPDGPALLYVDLHLVHEVTSPQAFDGL
                     RLAGRRVRRPERTVATLDHNVPTGDRRLPIADEISARQVDALIRNARAFGIELFDLHS
                     AEQGIVHVIGPELGLTQPGMTIVCGDSHTSTHGAFGALAFGIGTSEVEHVLATQCVVQ
                     SRPKTMEIRCSGRLGPGISSKDLILWVIRQIGTAGASGHVIEYTGSAVRALSMEGRMT
                     VCNMSIEA"
BASE COUNT          506 a          926 c          968 g          518 t
ORIGIN      
        1 ggcgggatga gagctttcgc gacgatctct cccctcaggc gatcctcgac accatcgatg
       61 cggagaccga aagccgagcc gtgattgtct ccgatgtcgg gcagcaccag atgtgggctg
      121 ccaaactctt tccgtaccag cgcccgggca gtcacttcac ctccggtggg ctgggaacca
      181 tgggctttgc cgtgcctgcg gctatgggcg ttgccttcgc ccgcccgggc gagccgatct
      241 gggccatctc cggtgatggc ggattccaga tgaacatgca ggagatcgcg accatggtgc
      301 aggaaggcat tccggtcaag atggcagtct tcaacaacgg ctacctgggc atggttcggc
      361 agtggcagca attctttcat ggccgccgct actcggcgac gccgatctgg agccccgact
      421 atgtccggct ggcggaggca tatgggatcg cgggttggcg ggtggactca gcgtcgaccc
      481 tggcagaatc agtccgtgcg gcgcaggcag aacctggtcc cgccctggtg gagttcatga
      541 tcgagcagga ggcgaatgtg tatcccatga tcccgccggg tggttcgctc tcggagccga
      601 ttgaaaacgc gcccgcgtcg ccgctggtac cggcatgacc gcacgccagg ccgtgtccgt
      661 cctcctcgaa gaccgtctca tcactctcac ccgggctgtt ggactcatcc gccgccgcaa
      721 tcttccggtg cggagtttgg cggtgggtcc cggtaataca cccggaatct ccaggctcac
      781 catcatgctg caatcagatc cggcgaccgc cgagcgcgcg gtccaacatc tacagaaagt
      841 ggtcggggtt cattccgccg tcgcattccc cgcgggtgag ggagtgaccc gggagctggc
      901 gctggtcaag gtgcgcgttc ccagcgagcg ctacggcgag ctcctcgacg tgatccagct
      961 ctacaagggt tccatcatcg atgactcgcc cgatgccatg atcgtcgagg tcagcgggtc
     1021 cgaggcgttc atcctctcct gtattcgcgc gctggaacgc ttcggtgtgg tcgagatcgc
     1081 ccgcagcgga acggtcgcgc ttgttcccgg cagtgactct caaccaagga cgttgccatg
     1141 accgcacccg tgcggatgta ctacgatgcc gatgccgatc gccgacgcct aaccggccgc
     1201 acctttgcca tcctcggctt cggaagtcag ggccacgccc acgccctgaa tctcaccgag
     1261 agtggcgccc aggtgctggt gggcctgaga aagaatcggc cctcctggga tcgggcgcga
     1321 gccgccggcc tggaggtgcg caccgcggac gaggcggcca acgccgccga tgtgatcatg
     1381 atgctggtgc cggatcagga cgcccggagc gtgtacgaag cgtcggtcgc gccggcattg
     1441 aaggccggca agaccctgat gttcgctcac ggcttcaaca ttcactatgg cgagatcgta
     1501 ccgccggccg acgtcgatgt gaccatggtg gcgcccaagt ccccgggcca cctagtacga
     1561 agcgagttcg aagccggccg cggagtgcct ggactggttg cagtccatca ggatgccagc
     1621 ggcgaggcgt tggccaacgc gctggcgtac gcatcgggca tcgggtgtac ccgagccgga
     1681 gtcatcgaga cctcgtttcg cgaggagacc gagaccgacc tgttcggtga gcaagcggtg
     1741 ctctgtggcg gagtgacggc gctggtcaag gctggattcg aaacgcttac cgccgcgggc
     1801 taccggccag aaatggccta cttcgagtgt ctgcacgagt tgaagctgat cgtggacttg
     1861 atgtaccgcg gcggccttca gttcatgcgc tactccatca gcgacacagc ggagtacggc
     1921 gattacaccc gggggccgcg ggtgatcacg ccggagacca gggcagccat gcgacggatt
     1981 ctcgacgccg tccaggacgg ctcattcgcc cgcgagtggc tggctgaaaa ccaggcaggg
     2041 cgtcatcggt tcgagcagct tcggcgggaa gatcgcgatc atgacatcga gcgggtggga
     2101 gccaagctgc gcgcgatgat gccctggtcg gaggagggaa agcgcggcga ggccgcgggt
     2161 cagcggagca gccagcccga agctcagggg cagcagccgg agcggccccg tcggccggct
     2221 gccccgctgc cccgctgatt catgtcccga actctgttcg acaagatctg ggacgctcac
     2281 gtcgtcgccc aggtgccgga tgggcccgcc ctgctctatg tggacctcca cctggtgcac
     2341 gaggtcacct ctcctcaggc gttcgacggt ctccggctgg caggccgcag ggtgaggcgg
     2401 ccggagcgca ccgttgccac gctcgatcac aacgtaccca cgggcgatcg ccggctcccg
     2461 attgcagatg agatctcggc gcgacaagtc gatgccctga tccggaatgc acgggcgttt
     2521 ggaatcgagc tcttcgatct tcactcggcg gagcagggca tcgtccacgt cattggaccg
     2581 gagctcgggc ttacccagcc gggcatgacc atcgtctgcg gcgattccca cacctcaacc
     2641 catggggcgt tcggcgcgct cgccttcggc atcggcacca gtgaagtgga gcatgtgctc
     2701 gccacgcagt gcgtcgttca gagtcgcccg aagaccatgg agatacggtg ctcgggccgg
     2761 ctcggacccg gaatctcatc caaggatctg attctctggg tgattcgcca gatcggtacc
     2821 gcaggagcgt ccgggcatgt catcgaatac accgggagcg ccgttcgcgc gctctcgatg
     2881 gaagggcgga tgacggtctg caacatgtcc atcgaggc
//
LOCUS       DASRPQ010000361         2259 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3804283, whole genome shotgun sequence.
ACCESSION   DASRPQ010000361 DASRPQ010000000
VERSION     DASRPQ010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2259
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3804283"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..300)
                     /locus_tag="VFD73_04230"
     CDS             complement(<1..300)
                     /locus_tag="VFD73_04230"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73228.1"
                     /translation="MKVLVADKFEKVGIDGLKELGCTVESQPDVKAEALPELIRSVDP
                     NILIVRSKKVNADALRAGTALSLVIRAGAGIDTIDVAAASELGVFVSNCPGRHSIA"
     gene            complement(386..1612)
                     /locus_tag="VFD73_04235"
     CDS             complement(386..1612)
                     /locus_tag="VFD73_04235"
                     /inference="COORDINATES: protein motif:HMM:NF018004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1015 family protein"
                     /protein_id="HZI73229.1"
                     /translation="MRLHPFSAVRPMPELAARVAAVPYDVVSRSEAVELARGNPYSFL
                     HVGRSDIDLPEGTDPHDSLIYATAREALDRLIRETTLIRDREPALYLYRQIREGRAQT
                     GIVACVHVDDYESDVIRKHEKTRPDKEDDRTRHVLTLNAHAEPVFLAYRGRSEIDELM
                     AAMMGTPALYDFVAPDDVRHTVWKVSHPAAIVEAFRSVPHTYVADGHHRSASAWRAGR
                     ERRAANPNHTGNEEYNWFLAVLFPADQLTILPYYRLVRDLGGQTADAVLERLRAVGQV
                     SPVKVPQPVRPGRFGVYLGGKWYEIVIDERSINRKDPIGSLDVSLLQDRILGPVLGVG
                     DPRTDKRLEFVGGSRGTPELERRVDSGEMAIAFSLYPTTMDQLMAVADAGTVMPPKST
                     WFEPKLRSGLFVHQLD"
     gene            complement(1630..>2259)
                     /locus_tag="VFD73_04240"
     CDS             complement(1630..>2259)
                     /locus_tag="VFD73_04240"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI73230.1"
                     /translation="RVGVTRYLWQERRTILSLTLRHLLLVGISLAAAIAFSLPLALAL
                     ERGRSVAEPVIRGVGLLQTLPSIALLAFMIPLLGIGVVPALVALFLYSLYPILRNTYT
                     GVRDASPSAVDAAWALGMTPSQVLRDVRLPLAAPVIMAGIRTAAVINVGTATLAAFIG
                     AGGLGDLISAGLALSDTRMILSGALPAAVLALLVDGALGYCERLVAPRI"
BASE COUNT          451 a          708 c          702 g          398 t
ORIGIN      
        1 ggcgatggaa tgccgtccgg ggcagttgga gacgaagacc ccaagctccg aggcggcggc
       61 aacatcgatt gtatcgatgc cggccccggc ccggatcacc agactcagcg cggtgccggc
      121 ccgaagtgcg tccgcgttta ccttcttgct ccgcacaatg aggatgttgg gatcgacgct
      181 gcggatcagc tctggcagcg cttccgcctt cacatccggc tgggactcga ccgtacatcc
      241 caattccttg agcccgtcga ttcccacctt ttcgaacttg tcggcaacga gaaccttcat
      301 ttcctctcca gaacagcagt cgagagtcga ggtctagagt ctagagtcta gggcctagag
      361 gcttggggtt ccagaccttc gacgctcaat ccaactggtg gacaaagagc ccgcttcgga
      421 gcttcggctc gaaccaggtg ctcttggggg gcatgacggt cccggcgtcg gcaaccgcca
      481 ttaactggtc catggtggtt ggatacagcg agaaggcgat cgccatttcc ccggagtcga
      541 ctcggcgttc cagctcaggg gttcctctgc tgcctccgac gaactccaat ctcttgtcgg
      601 tccgcgggtc gccgacgccg agcaccggac cgaggatccg atcctggagc agcgagacat
      661 cgagcgagcc gatcgggtcc ttgcggttaa tggatcgttc gtcgatgacg atctcgtacc
      721 acttcccgcc gagatacaca ccaaatctcc ctgggcgaac cggctgtggc acttttaccg
      781 gcgaaacctg gccaacagca cggaggcgct ccagcacggc gtcggcggtc tgaccgccca
      841 gatcacggac cagccggtaa tagggcagga tcgtcaattg gtctgccgga aagagaaccg
      901 cgagaaacca gttgtactcc tcattcccag tgtgattcgg gttggcggcc cgccgttctc
      961 ttcccgcccg ccatgcactg gccgaccggt gatgtccatc ggcaacatag gtatgaggta
     1021 ccgagcggaa cgcctcgacg attgccgcgg gatgtgaaac cttccagacg gtatggcgca
     1081 cgtcgtccgg cgcgacaaag tcgtacaatg ccggtgtgcc catcatcgca gccatgagct
     1141 cgtcgatttc gctccgcccg cgatatgcca gaaacaccgg ctcggcatgt gcgttcaggg
     1201 taagcacgtg gcgagtccgg tcgtcttcct tgtcgggccg ggtcttctcg tgcttccgga
     1261 tcacatcact ctcataatca tcgacgtgaa cgcaggccac gattccggtc tgagctcggc
     1321 cttccctgat ctggcgatag agatagaggg ctggctcccg atcccggatc agcgtcgtct
     1381 cgcggatcag ccgatcgagt gcttcgcgag cggtggcgta gatcagcgag tcatgggggt
     1441 cggtaccctc gggcagatcg atgtcggagc gtcccacgtg gagaaagctg taaggatttc
     1501 cccgggccaa ctcgaccgcc tcggaccggc tcacgacatc atagggaacc gcggccactc
     1561 gagcggcgag ctcaggcatt ggccggacgg cactgaatgg atggagtcgc acgtctttga
     1621 gcctctgatc tagatccgcg gagccaccag ccgctcacag tagccgagcg ctccgtcgac
     1681 cagaagcgcg agcaccgcgg caggtaacgc gcccgaaaga atcatgcggg tgtccgataa
     1741 cgccagtccc gccgagatga gatcacccag acctcctgct ccaataaagg cggcaagggt
     1801 ggcggtccca acgttgatga ccgcggcggt gcggataccg gccatgatca ccggtgcagc
     1861 caacgggagc cgtacgtcgc ggaggacctg gctcggagtc attccgagag cccaggccgc
     1921 gtccaccgca ctgggcgagg cgtcccgcac cccggtatag gtgttccgga ggatcggata
     1981 gagcgagtag agaaacagcg cgaccagtgc tggcacgaca ccgatcccga ggaggggaat
     2041 catgaaggcg agaagtgcaa tgctgggcaa cgtctgcagc aggccaacac cacggataac
     2101 cggctctgcc acgctccggc ctcgctccag cgcgagggca agcggcagcg agaaggcgat
     2161 tgctgccgcg agcgagattc cgaccagcag caagtggcga agggtcagac tcagaatggt
     2221 ccgacgctcc tgccacagat agcgcgttac tccgacacg
//
LOCUS       DASRPQ010000362         1862 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_39249, whole genome shotgun sequence.
ACCESSION   DASRPQ010000362 DASRPQ010000000
VERSION     DASRPQ010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1862
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39249"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1381
                     /locus_tag="VFD73_04245"
     CDS             <1..1381
                     /locus_tag="VFD73_04245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73231.1"
                     /translation="ADCHPAGWNYRDNLTGQSLLVDVLLASGWSRGYLELLVTTSYHP
                     ASAGRAAGNYSLSYQFVPGGQASAMANGNAGVIRVPVTSSWQTVTLTPSSDIAKLWPD
                     LDYRDFAMWELNLSAVSTGDKVVGYFDYLRFDRTISGQAQFSEQAAMKQALTSKYPGV
                     TQQQGLEVSRNQPHVNWFGPSVTLPSYSGISSSAYQGYLQNTVIPQIHASGGLASYNH
                     PYGYSSLPAQPQSQQDTLLSQVASKLLANHVLGADLLEVGYNLRQGVDVKHHIGLWDV
                     LSRNAVFTTGNGVSDDHVGTNWRGIRNNWVTMAWAVSTAQSDLIKALAAGRAWCGSLS
                     SFGKGTLDLLVDGTVPMGAVSVSSVTSRKLTITATKMPSGSTLQLLQGAVDYAGQNGL
                     SPDTRVISSFTTSQLSAGSVTQQVSTSADSFLRTQVVSSTGTILATSNPVWLLRKAPP
                     NGIPPARAA"
BASE COUNT          335 a          620 c          584 g          323 t
ORIGIN      
        1 cgcggactgc cacccggccg ggtggaacta ccgggacaac ctcaccggcc agtctctcct
       61 ggtcgatgtt ctgctggcgt ccgggtggtc ccgtggctac ctcgagttgc tggtcaccac
      121 ctcctaccac ccggcctcgg cggggcgtgc ggcgggcaac tattcgctgt cttaccagtt
      181 cgtccccggc gggcaggcct cggccatggc caacggcaac gccggagtca ttagggtccc
      241 ggtaacaagc tcctggcaga cggtcaccct cacgccgtca tcggacatcg cgaagctgtg
      301 gccagacctg gactaccggg acttcgccat gtgggaactg aacctgtcgg cggtgagcac
      361 tggcgacaag gtggtgggct atttcgacta cctgcggttc gaccggacca tcagcggcca
      421 ggcacagttc agcgaacagg ccgcaatgaa gcaggcgctg acgtcgaagt accccggcgt
      481 gacgcagcag cagggccttg aagtgtcgcg gaaccagccg catgtcaact ggttcggccc
      541 gagtgtcacc ctgccgagct actcgggcat ctcgagctcg gcctaccagg gatacctgca
      601 gaacaccgtg atcccgcaaa tccatgcctc cggcgggctc gcctcctaca accatcccta
      661 tggctacagc tctctcccgg ctcagcccca gtcccagcag gacaccctgc tatcccaggt
      721 ggcctccaag ctgctggcta accacgtgct cggcgcggac ctgctggagg tcggatacaa
      781 cctgcggcag ggcgtggacg tcaagcacca catcggcctg tgggacgtgc tgtcccgcaa
      841 cgcggtgttc accaccggca atggcgtatc cgacgaccat gtgggcacca actggagggg
      901 cataaggaac aactgggtca ccatggcctg ggctgtgagt accgcccagt ccgacctgat
      961 caaggccctg gccgcgggcc gggcctggtg cgggtcactg tccagtttcg gcaaaggcac
     1021 tttggacctg ctcgtggacg ggacggtgcc gatgggcgcg gtcagcgtgt ccagcgtgac
     1081 ttcccggaag ctcaccatca ctgcgaccaa gatgccgtcc ggcagcaccc tgcagcttct
     1141 ccagggcgcc gtggactacg ccgggcagaa cggcctatcc cctgacaccc gggtcatcag
     1201 ttccttcacc acctcgcagc tttccgccgg ctcggtcacc cagcaggtct ccacgtccgc
     1261 ggacagcttc ctgcggaccc aggtggtctc ctccaccggg acgatcctcg ccacatccaa
     1321 cccggtgtgg ctgctgcgga aggctccgcc gaacggcata cctcccgcca gagcggcgtg
     1381 acgccggtcc gccgctatcc agaacccgga aacaggactc gcaaacggcc cgccccgagc
     1441 tcactctggc ctcgggatga atcatcacgg ttagatgtcc ggctggttaa cgttcgcgat
     1501 ctcgcccgta aacggacgta ttgacctatg ttgctgatcg tgtaaatatg tcaggcatag
     1561 tcatgttggc gtaggaaacc gtttgaacac gtgggcgctg cctgggaggg tgcgtgttaa
     1621 cttcctgcgg gagcgcaagc gcgatgcgct gcctggatag ggagctgcgg cggtgcggca
     1681 ccgatcgttg cagtcccgcg agccgtgggc gcgtcagcca acctcaccgg ccaggctttc
     1741 gaaacgccct gaccgggatg taacaggtca ggcggcgatg gctgccattt ggcaggagcg
     1801 tggagtagcg cggaaacgtg ggcgatccgc cgtccggtca gtgctagccg aaagggaaaa
     1861 at
//
LOCUS       DASRPQ010000363         1161 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3183264, whole genome shotgun sequence.
ACCESSION   DASRPQ010000363 DASRPQ010000000
VERSION     DASRPQ010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3183264"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..686
                     /locus_tag="VFD73_04250"
     CDS             <1..686
                     /locus_tag="VFD73_04250"
                     /inference="COORDINATES: protein motif:HMM:NF014895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HZI73232.1"
                     /translation="QVRAVLRAAAGHNIHLMLPLVTTVQEVKEAREILMEESRALQKA
                     GVRAAPSVPVGVMVETPAAVLMADRLAEVSAFFSVGTNDLTQYTMAVDRGNARLATRF
                     TPHDPSIVRQLQRVLEVGKAAGLPVSVCGEMASEPLSAVLLLGLGYDCLSVSPPALPL
                     VKWVVRTVPEESAQRAADASLTASSAAEVSNVLRETVGEFIDLRLLDPHSTLPGRGRV
                     ASLPPGNTA"
     gene            718..>1161
                     /locus_tag="VFD73_04255"
     CDS             718..>1161
                     /locus_tag="VFD73_04255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine synthetase N-terminal
                     domain-containing protein"
                     /protein_id="HZI73233.1"
                     /translation="MIGARHHIFTSESVTEGHPDKVADQISDAVLDAILARDPAGRVA
                     CETLVTTGMAVVAGEITTSTYVHIPDLVRETVESIGYTDASYGFDGRTCAVLTTIDRQ
                     SPDIAMGVDAAGNKEQGAGDQGMMFGYATDETRERMPLPIVLAHRI"
BASE COUNT          202 a          384 c          373 g          202 t
ORIGIN      
        1 cccaggtccg tgccgtcctg cgagcggcag ccggccacaa catccatctc atgctgccac
       61 ttgtgaccac ggtgcaggag gtgaaagagg cgcgcgaaat cctgatggaa gaatcgcggg
      121 ccttgcagaa ggccggcgtt cgcgccgctc cgtcggtacc ggtcggggtg atggtggaaa
      181 ccccagccgc ggtgctgatg gccgaccggc tggcggaggt cagcgcgttc ttcagcgtag
      241 ggaccaacga cctcactcag tacaccatgg cggttgaccg tgggaacgcg cgactggcta
      301 cccggttcac gccgcacgat ccatcgatcg tgcggcagct ccagcgggtg ctcgaggtgg
      361 ggaaggccgc ggggctaccg gtgagtgtct gcggggaaat ggcgtcggag ccgctaagcg
      421 ccgtcctgct gctcggattg ggctacgatt gcctgagcgt ctctcctccg gcgcttcccc
      481 tggtaaagtg ggtggtgcgc acggtgcccg aggaatctgc ccagcgcgcc gccgacgctt
      541 cgctgaccgc ttcgagcgcc gccgaggtgt cgaacgtcct ccgggagacg gtcggagagt
      601 tcatcgatct ccgactcctc gatccgcact caacgttgcc tgggcgtggc cgggtcgcta
      661 gcttgccccc cggaaacacc gcctaacacg cagtaccaac ctcgacccga ccccccaatg
      721 atcggtgcca ggcatcacat ttttacttcc gaatcggtga cggaaggcca cccggataag
      781 gtggccgacc agatctccga tgcagtgctc gatgccattc tcgcgcggga ccccgccggg
      841 cgggttgcct gtgagacgct ggtgaccacc ggcatggccg tcgtagccgg cgagattacc
      901 accagcacct atgtccacat ccccgatctg gtccgcgaga ccgtcgaatc gatcggctat
      961 accgatgcgt cctacggctt cgacggacgc acctgtgctg tccttaccac gatcgaccgg
     1021 caatctcctg acatcgccat gggagtcgat gccgctggca acaaggagca gggtgccggc
     1081 gaccagggga tgatgttcgg ctatgccacc gacgaaaccc gggaacgcat gccgctcccg
     1141 attgtcttgg cgcaccggat c
//
LOCUS       DASRPQ010000364         1494 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2233125, whole genome shotgun sequence.
ACCESSION   DASRPQ010000364 DASRPQ010000000
VERSION     DASRPQ010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1494
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2233125"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..233
                     /locus_tag="VFD73_04260"
     CDS             <1..233
                     /locus_tag="VFD73_04260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HZI73234.1"
                     /translation="DRMLAEQEAARSRDRRAMVGTGDRSAKIRTYNFPQSRITDHRIN
                     LSVHNLTDVLNGNLDELVNALRMASRQELMDA"
     gene            226..1083
                     /gene="prmC"
                     /locus_tag="VFD73_04265"
     CDS             226..1083
                     /gene="prmC"
                     /locus_tag="VFD73_04265"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: protein motif:HMM:TIGR03534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HZI73235.1"
                     /translation="MPEAIAPMRAVLQQAVNRLRGHGVSDCRRQVLSIWSGISGDRWS
                     AVLDQETGPDAAVVDRFEHAVDRLVRGEPLAYVIGTIGFRHLTLQTDRRALIPRPETE
                     GLIDLLLERVHGGVVADVGTGTGCLALSLALEGGFSQVLAIDNSQPALELAAQNVAAT
                     PTTTPVRLIQGDLCTSIAHGTLDALVSNPPYLSADEYAALDRSVRDWEPAAALVAGVE
                     GLEIARRLLIEGRGTLRPRGWLALEVDCFRAHRAAQDAVYSGWENVSIHQDLFGRERY
                     LLAQRSESL"
     gene            1080..1433
                     /locus_tag="VFD73_04270"
     CDS             1080..1433
                     /locus_tag="VFD73_04270"
                     /inference="COORDINATES: protein motif:HMM:NF017902.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF family regulator"
                     /protein_id="HZI73236.1"
                     /translation="MIWDKAQDLGRLIGQSAEYQALRRAETSLREDKETVAKLDQIQT
                     LARKVDQAVSSGQMPDQATAESYENAVRDLEMSPTGQAYVVARSNFEKLMQKVNQQIS
                     EGMDKGAASSIITLG"
BASE COUNT          286 a          439 c          499 g          270 t
ORIGIN      
        1 tggatcgcat gctggcggag caggaggcgg cccggtctcg ggatcgacgt gcgatggtgg
       61 ggaccggtga ccgatcggcc aagatccgga cctataactt tccccaaagc cgcatcactg
      121 atcaccggat caatctctcg gtgcacaatc tgaccgacgt gctcaacggg aacctggacg
      181 agctggtcaa cgcgttgcga atggcgagcc ggcaggagct catggatgcc tgaggccatt
      241 gctcccatgc gggcagtcct gcagcaggcg gtcaatcgtc tcagaggtca cggtgtatcc
      301 gactgccggc gtcaggtgct ctcgatctgg agcgggattt ccggtgatcg ctggtcggcg
      361 gtgttggatc aggagacagg tccggacgcc gccgtcgtag accgtttcga gcacgcggtc
      421 gaccggctgg tgcgaggaga gccgttggcg tacgtcattg gaacgatcgg gttccgccat
      481 cttaccctcc agactgaccg ccgcgccctc atcccgcggc ccgaaaccga gggattgatc
      541 gatcttctcc tggagcgagt gcacggaggt gtcgtcgctg acgtgggtac cggcaccggg
      601 tgcctggcct tgagcctggc cctggagggt ggcttcagcc aggttctggc gatcgacaac
      661 tcgcagccgg cgctcgagct cgccgctcag aacgttgcag cgaccccaac aacgacgcca
      721 gtccgtctga ttcagggtga cctctgcacc tctatcgcgc acggcacctt ggacgcactt
      781 gtctcgaacc caccatatct ttcagcggat gagtacgccg cactggatcg ctcagtgcga
      841 gactgggagc ctgcagctgc cctggtggcc ggagtggagg ggttggagat cgcccgccga
      901 ctgctgattg agggccgtgg cacgttgcgg cctagagggt ggctggctct cgaggtggac
      961 tgcttccggg cgcatcgtgc agcgcaggac gcggtgtaca gcggctggga gaacgtgagc
     1021 attcatcagg acctatttgg ccgcgagcgc tacctgctcg cgcagaggag cgagtcattg
     1081 tgatctggga taaagcgcag gacctcggcc ggctgatcgg ccagtctgcg gagtatcagg
     1141 cgctcagacg ggcggagaca tccctgcgag aggacaaaga aaccgtcgca aaactggatc
     1201 agatccagac gctcgcccgc aaggtagacc aggctgtgtc ctccggtcag atgccggatc
     1261 aagcaacggc tgagtcgtac gagaatgccg tgcgggatct ggagatgagt cccaccggac
     1321 aagcctacgt cgtagcccgg tcgaatttcg aaaagctgat gcagaaggtg aaccagcaga
     1381 tcagtgaggg catggacaag ggagcagcca gcagcatcat cacgctggga tgagctctcg
     1441 cggtttcttc atcgtcctcg aagggccgga ggcctccggc aaatccacac tgct
//
LOCUS       DASRPQ010000365         1107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4114100, whole genome shotgun sequence.
ACCESSION   DASRPQ010000365 DASRPQ010000000
VERSION     DASRPQ010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4114100"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..598
                     /locus_tag="VFD73_04275"
     CDS             <1..598
                     /locus_tag="VFD73_04275"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZI73237.1"
                     /translation="SRSRSSRAPPVANATIRRYPARRRHGQAKPGGKPSGILPCSGDG
                     AAKTMAQMKNVSEFNKLRVQLFIEAVLNEGRLELIDELIAADFVGHIPCAEPGVTGPA
                     GVRQLVSSHRHAHPGLHIKIEDQIAEEDRVVTRWHATVPARETQAPPASARRTACYAG
                     ISITRLLAGKQVDSHTECTSFTTSPAPAGLPITLKSEP"
     gene            674..>1107
                     /locus_tag="VFD73_04280"
     CDS             674..>1107
                     /locus_tag="VFD73_04280"
                     /inference="COORDINATES: protein motif:HMM:NF018561.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1254 domain-containing protein"
                     /protein_id="HZI73238.1"
                     /translation="MFAILRVRFAHSKKWISHFAICLLAGAGLVAALAPAGAAASARH
                     PASTARPFFSVAENYTIRYYPRFMTYFQQKLGGFNRLAGPNRVGPLYGYVVSINVDTL
                     YASFFLDLSQGPQIFTIPPTDVTYSLLTLDVFGDAFQTKIKS"
BASE COUNT          200 a          399 c          303 g          205 t
ORIGIN      
        1 ctcgcgttcg cgctccagca gagcgccccc tgtagctaac gccaccattc gacgctaccc
       61 cgcacgccgg cgacatggcc aggcaaaacc tggggggaaa ccctcgggga tcctcccttg
      121 tagcggcgac ggcgccgcaa agaccatggc gcagatgaag aacgtcagcg agttcaacaa
      181 gctcagggtc cagctgttca tcgaggcggt cctcaacgag ggacggctcg agctgatcga
      241 cgagctgata gccgccgact tcgttggcca catcccctgc gccgagccgg gcgtgaccgg
      301 tccagcaggc gtgcgccagc tcgtgtcgag ccaccgccac gcccatcccg gcctgcacat
      361 caagatcgag gaccagatcg ctgaggagga ccgcgtcgtg acgcgctggc atgcgacggt
      421 tccagcacgg gagactcagg ctccccccgc ttccgcccgg cgcactgcgt gctacgccgg
      481 aatctcgatc acccggctcc tggccgggaa gcaagtcgac tctcacaccg aatgcaccag
      541 cttcaccacc agccccgccc cagcgggtct gccaataaca ctgaaatctg agccataacc
      601 cactaactgc tggccattac tgccgcgtct tcatgtcggc gcagcaggct tctattcacc
      661 tacgggaggt tccatgtttg ccattcttcg agtgcgcttt gctcattcca agaagtggat
      721 tagtcacttc gccatctgcc tcttggctgg cgctggcctg gtcgcagccc tggcgccagc
      781 gggtgccgct gccagcgcgc gccacccggc gtcgacggcg cggccgttct tttccgtcgc
      841 cgagaattac acgatccgtt actacccccg tttcatgacc tacttccagc aaaagctcgg
      901 gggtttcaac cggctcgccg gccccaaccg tgtcggcccg ctttacggct atgtcgtctc
      961 catcaacgtc gacactctgt acgccagctt tttcctggac ctgtcccagg gcccgcagat
     1021 cttcacgatc cctccgacgg acgtgaccta ctcgctgctc accctggatg tgttcgggga
     1081 cgcattccag accaagatca agtccca
//
LOCUS       DASRPQ010000366         1720 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4114133, whole genome shotgun sequence.
ACCESSION   DASRPQ010000366 DASRPQ010000000
VERSION     DASRPQ010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4114133"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..402
                     /locus_tag="VFD73_04285"
     CDS             <1..402
                     /locus_tag="VFD73_04285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73239.1"
                     /translation="LALDPEFAMKDGKRPGTDWMGRMDASEVNHAIDVLAKIVDEEQL
                     PPKVLVVHRFTRNMLTNASQIRLDPRVQVVIDMDGWGSPGSKMGAYRWFVVRHPVQYT
                     GFKLFYKNDKPMMKPEEVLELYPKPMYIQYQ"
     gene            519..998
                     /locus_tag="VFD73_04290"
     CDS             519..998
                     /locus_tag="VFD73_04290"
                     /inference="COORDINATES: protein motif:HMM:NF039391.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6265 family protein"
                     /protein_id="HZI73240.1"
                     /translation="MRASILPVLLLTSLFSSPLPREPASAPTISDLGWLEGTWRGSIG
                     SRQFEARYSGPDGGQILSASKYTQDGTPAGFEFERFEQQGDSLVLTPFPEGKSSVSFP
                     LSEYDAKARHAVFENLAHDFPARISYQRVGRDRLIIIVSGPGEDGNEQVVTYALTRK"
     gene            1002..1625
                     /locus_tag="VFD73_04295"
     CDS             1002..1625
                     /locus_tag="VFD73_04295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73241.1"
                     /translation="MSSNSTSSIADQPPSRRQASAPDGAALERQLARWIAEGDEAALA
                     ELLDLVGPTLYAVAFKITSNEQHATAALEESLVELWEQRAWLTRLPALSPWIVERSRA
                     WAIALRNGVSPSAPAPVRDRSGDVPLSRRLLRCPQPIRVARGMAALDQLGSPECQALV
                     LALRAGRPVAEIATELGASVDQVAPLLRDGLHNARHTLEQTLRREAL"
BASE COUNT          326 a          509 c          552 g          333 t
ORIGIN      
        1 cttgccttgg atccagagtt cgccatgaag gacggcaaac gtccaggcac cgactggatg
       61 ggacgaatgg atgccagcga ggtgaaccac gccattgatg tcctggccaa gatcgtggac
      121 gaggagcagc tgcctcccaa ggtgctcgtc gtgcaccgat ttacccggaa tatgctgacc
      181 aatgcctcgc agattcgtct cgacccgcgg gtccaggtgg tgatcgacat ggacggctgg
      241 ggctcacccg gcagcaagat gggtgcgtat cgctggttcg tggttcgtca cccggtccag
      301 tacaccggat tcaagctgtt ttacaagaac gacaaaccga tgatgaagcc ggaggaggtt
      361 ctggagctgt atcccaagcc gatgtatatc cagtatcagt agaggcgggg taagtggtaa
      421 gcggggaagt gtgagggtcg ggagttgatg atgtcgggag ttgaggagag gtcggaagtt
      481 ggtgagttgg aaaatcgcaa agcgcaggtg gaggtcaaat gcgtgcttcg atcctgccgg
      541 ttctactgct gacatcactc ttttcctccc cgcttccccg cgaacctgct tcggcaccta
      601 ccatctccga tctcggatgg ctggagggta cctggcgcgg cagcatcggc agccggcagt
      661 tcgaggcccg atactctggc cccgacggcg ggcagatctt gagcgcgagc aagtacaccc
      721 aggacgggac tcccgccggc tttgaattcg aacgcttcga acaacaaggc gactcgctgg
      781 tgctgacccc gttccccgag ggcaagtcgt cggtatcttt ccctctgtcg gagtacgatg
      841 ccaaggctcg gcacgcagtc ttcgagaatc tggcgcatga cttccctgcc cgcatcagct
      901 atcagcgagt aggacgggat cggttgatca ttatcgtctc cggaccggga gaagatggaa
      961 acgaacaggt agtgacctac gcattgactc ggaagtgagt agtgtccagc aattcgacct
     1021 cctccattgc tgatcagccg ccctcgcggc gccaggcgtc cgcgcctgac ggagctgcgc
     1081 tggaacgtca actcgcacgc tggatcgcag aaggagacga agccgccctg gctgagctgc
     1141 tcgatctggt cggtcccacg ctgtatgcag tagccttcaa gatcaccagc aatgaacaac
     1201 atgccacggc ggcattagaa gaaagcctcg tggagctttg ggaacagcgt gcctggctga
     1261 cccggcttcc agcactgtct ccgtggatcg ttgagcgctc tcgggcatgg gcgattgccc
     1321 tgcgaaacgg cgtgagtccg tctgcgccgg cccccgttcg agaccggtca ggggacgttc
     1381 ccttgtcgcg ccggctgctc cgctgtcctc agccgattcg ggtcgcgcgg gggatggccg
     1441 cactcgatca gctcggctcg ccggaatgtc aggcgttggt gctagccctg cgagctggcc
     1501 gacccgtcgc ggagatcgcg acggagctgg gggcctcagt cgaccaagtc gctcccctgc
     1561 tgcgggatgg tttgcacaac gcgcgtcaca cactggagca gacgctgcga cgggaggcgt
     1621 tgtgactcac acgcaggcaa tgctcgacag cctggctccc ttcgccctcg gacttccgga
     1681 tgccgatccg ggtggggcac tggctgccca ccttgccgag
//
LOCUS       DASRPQ010000367         1830 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2234055, whole genome shotgun sequence.
ACCESSION   DASRPQ010000367 DASRPQ010000000
VERSION     DASRPQ010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1830
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2234055"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VFD73_04300"
     CDS             complement(<1..186)
                     /locus_tag="VFD73_04300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73242.1"
                     /translation="MHGADSATFPFSGRTYPQLARIVRALCAVPGRWCLPVVAAVAVT
                     VAVSLGRDAFARLLLEFA"
     gene            complement(462..1028)
                     /locus_tag="VFD73_04305"
     CDS             complement(462..1028)
                     /locus_tag="VFD73_04305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73243.1"
                     /translation="MVRLAKDGATWRIGTDAEVDWIANGTSIGRTITAAIPPVFEAYA
                     TVVLPEGGEGQDTYDPAVLALLCEQSPDQPWWLGYLDTGADDIVFPGAPMVTLYSGWH
                     YVLVEAGPDQAATWRRHGPWSFWKGALPNLMFPADHSWLVSTLWDDDWTCIGGPAELV
                     DRFLGHPDLAARPVVLGQDATPPGHEAL"
     gene            1116..1191
                     /locus_tag="VFD73_04310"
     tRNA            1116..1191
                     /locus_tag="VFD73_04310"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1139..1141,aa:Ser,seq:tga)
     gene            1277..>1830
                     /locus_tag="VFD73_04315"
     CDS             1277..>1830
                     /locus_tag="VFD73_04315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73244.1"
                     /translation="MAVGTAYHWPSECSARRGLSSAREFEAPLLAGLAKVQGNQEVAH
                     MMPFRIGADASCTDGACGQVSRVIVNPIAREVTHLAVDPKGRYGPGRLVPIDLVDATT
                     GQIRLRCTLAEFQALHPAQETESVRDLDPTGHDNAPKKVKWVVVGTPGSGVGVFARPP
                     KPEAPQQVSVCHREAAAGVDTKPV"
BASE COUNT          366 a          618 c          584 g          262 t
ORIGIN      
        1 ggcgaactcc aggagcagcc gggcaaaggc gtcccgaccg agactgacag caacggtgac
       61 agcaactgca gcaaccaccg gcaagcacca gcgaccgggg acagcgcata acgctcgcac
      121 gatccgtgcc aactggggat acgtccggcc tgaaaagggg aaggtcgccg agtccgcacc
      181 gtgcacccca ccgagtcgag cagcgagacg gtacagcagc aaagtacagc aacgccccct
      241 gccagcaaca agcacgagct gccgcccaca ccctgcgtta gctgggacag cagacaaacg
      301 cccagaggcg ccgctagttc gggacgaaga ggccgctggg ccattagcgg gccattagcc
      361 acggtgagca gcagtcaact acggctactg ggaagcatca aacttcccag ctcagcggcc
      421 ctgacggcta tgcgccatac accttccaag ctggtcatgc gtcagagcgc ctcatgacct
      481 ggtggtgtgg cgtcctgccc gaggactacc ggccgggccg ccagatcagg gtggcccagg
      541 aacctgtcca ccagctcggc cgggccgccg atgcaggtcc agtcgtcatc ccacagcgtc
      601 gacaccaacc atgagtggtc tgcggggaac atcaagttgg gcaaggcgcc cttccagaac
      661 gaccaggggc catgcctgcg ccaggtggcg gcctggtcgg gccccgcctc gaccagcacg
      721 taatgccacc ccgagtacaa ggtcaccatc ggcgctccag ggaagacgat gtcatcggcg
      781 ccggtgtcca gatacccaag ccaccacggc tggtcgggcg actgctcaca cagcagcgca
      841 agcacggccg ggtcataagt gtcttgcccc tcacctcctt ccggtagtac gacggtggcg
      901 taggcctcga agaccggcgg gatggcagcg gtgatggtcc ggccgatgga tgtgccgttg
      961 gcgatccagt cgacctcggc gtcggtcccg atccgccagg tggcgccgtc cttggcaagc
     1021 ctcaccatgc caccagccta aacgcgggat atacgcggga tgatcctgct tgacaggcca
     1081 tccccgagtg ccgaaaggca ggtagcagcg ccgcagggtc gtggaccacg gatgctcttg
     1141 aaaaccattg tggcggcaac gtcaccgtgg gttcgaatcc cacgccctcc gctccgacct
     1201 cgcaaaacgg attctgaccg gggcttatgc ccgcctgtct gacgtcgcag gctcgtcacg
     1261 cacagcgcca cgccgcgtgg ccgtcggcac ggcttaccat tggcccagcg aatgctcggc
     1321 caggcgcggc ctgtcctcgg cccgggagtt cgaggcgccg ctgctggctg ggctggccaa
     1381 ggtccaagga aaccaggagg tggcgcacat gatgccgttc aggatcggcg ccgacgccag
     1441 ctgcaccgat ggagcctgcg gtcaggtaag ccgcgtaatc gtcaacccga tcgctcggga
     1501 ggtcactcat ctcgcagtcg accccaaggg ccggtacggc ccgggacggc ttgttcctat
     1561 tgacctcgtg gacgctacga caggccagat ccggcttcgc tgcaccctgg ccgagttcca
     1621 ggcgctccac cccgcccagg agaccgagtc cgtgcgagac cttgacccca ccgggcacga
     1681 caacgccccc aagaaggtga agtgggtggt tgtgggcacg ccgggaagtg gcgtgggggt
     1741 gttcgcgagg cctcccaaac cagaagcccc gcagcaggtc tcagtatgcc accgtgaagc
     1801 agcggctgga gtggatacaa agccagtaca
//
LOCUS       DASRPQ010000368         1804 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4429243, whole genome shotgun sequence.
ACCESSION   DASRPQ010000368 DASRPQ010000000
VERSION     DASRPQ010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4429243"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VFD73_04320"
     CDS             <1..190
                     /locus_tag="VFD73_04320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73245.1"
                     /translation="EKPRYHGRHSMYLHQEPRWCRAGKLQYPEALRGWSPRVQQSQYP
                     SGQEQVSAGQLRRSERTP"
     gene            775..>1804
                     /locus_tag="VFD73_04325"
     CDS             775..>1804
                     /locus_tag="VFD73_04325"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI73246.1"
                     /translation="MTNCTMCHTPIPGDGRFCPNCGTPSGGLSHPVPQPTDELRQRLA
                     LALAGRYEITRLLGRGGMAVVYLAQDLTLERQVAIKVLPPEMAHDQKLVVRFQQEAKT
                     AAKLDHPNIIPIYRVEHEAGLVYFVMKYVTGRSLDQLLEQGPVSFDVARRILREAALA
                     LGHAHQRGIVHRDVKPANIMMEADGRVMLTDFGISKVLEGSSQLTGTGNIIGTPHYMA
                     PEQAKGLEVDGRADQYALAVVGHQLLTGKQPFDGSSHSILYKHVFEAPPRIFESRPDA
                     PTDLCAALDRALAKEPEKRFRTMEEFAAAVSGERRSSPTLVTPAVATKEVAIRSPRWT
                     QRVVPRVLI"
BASE COUNT          336 a          556 c          559 g          353 t
ORIGIN      
        1 cgagaagcca cggtatcatg gacggcattc gatgtatctg caccaggagc cacggtggtg
       61 tcgcgccggg aagttgcagt atcccgaggc actgcggggc tggagtccac gggtgcagca
      121 gtcgcagtat ccgtccgggc aggagcaggt ctcggccggg cagttgcgac gctcggagcg
      181 tacgccttga ccgatgtgtc ggtggtcgca cgggaatgtc tcgtcgcgac tctctgctgt
      241 ttgtgctggg gcgaagccgg tcgggtcttg gctgcctccg ttcggcttgc cggttgctct
      301 atgggagaca ccgcctggtt agccttggct gaagtcgtcg tggatgtgtc cctcgcttga
      361 ctcgtgtcgg gaagtgtcag gtcaggggcc ggagcgctgc tcctgctatt ggtgctgacc
      421 cgctgctctc gccggttgga gcagccagaa agaacgctga gtcccatgag taccagaatg
      481 aggcgcttca tcactcctcc agaagccgtc gggtagagcc gcagtcttcc actcccaacc
      541 gcgagattct gtgcgatggc tcacccggct ggtctcccga tcctaccagg gcacaggcct
      601 tgctccccca ctattagaga cgttctaacc ccttctaatt ccgagatctc ggcgaatcag
      661 cccgggagcg cggtcccttt gctgacggag tccgccagag atgcggagat ttaccagact
      721 tgaccgtagc ggatcgatga ccttcccgcc cctcgttgga accggagtag cacggtgacc
      781 aactgcacga tgtgccatac cccgattccc ggggacgggc gattctgtcc gaactgtggc
      841 actccatccg gtggtctctc gcacccggtt ccccaaccaa ccgacgaact ccggcagcgt
      901 ctggctctgg cgctcgccgg tcgctatgag atcaccaggc tcctcggccg cggcggaatg
      961 gcggtagtat atctggccca ggacctgacc ctcgagcgcc aggtcgcgat caaggtgctc
     1021 ccgccggaga tggcacacga tcaaaagctt gtggtccggt tccagcagga agcaaagacc
     1081 gcggccaagc tggaccaccc caacatcatt ccgatctacc gggtagagca tgaagcaggt
     1141 ctcgtgtact tcgtcatgaa gtacgtcacg ggacgctcac tggatcagtt actcgaacag
     1201 ggaccggttt ccttcgatgt cgcccggcga attctccggg aggcggcact cgcgctcggc
     1261 catgctcacc aacggggcat cgtccatcga gatgtgaaac cagccaatat catgatggaa
     1321 gccgatgggc gggtgatgct gacggacttc ggcatctcca aggtgctcga aggatcgtcc
     1381 cagctgaccg gaaccgggaa catcatcggc actccccact acatggcccc agaacaggcc
     1441 aagggactgg aggtggatgg ccgggccgac cagtatgccc tggcggtggt ggggcatcag
     1501 cttctcacgg gtaaacagcc gttcgacggc tcgtcccaca gcatccttta taagcatgtc
     1561 ttcgaggcac cgcctcgcat cttcgagtct cgacccgatg ccccgactga tttgtgtgcc
     1621 gctctggatc gggccctggc gaaagaaccg gagaagcgtt tccgcacgat ggaggaattt
     1681 gccgctgcgg tcagcgggga acggaggagc tcacccactc tggtaacccc agccgttgct
     1741 acaaaggaag tggcaattcg gtcaccgcgt tggactcagc gcgtggtacc ccgagtgctg
     1801 atcg
//
LOCUS       DASRPQ010000369         1502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3806025, whole genome shotgun sequence.
ACCESSION   DASRPQ010000369 DASRPQ010000000
VERSION     DASRPQ010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3806025"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..535
                     /locus_tag="VFD73_04330"
     CDS             <1..535
                     /locus_tag="VFD73_04330"
                     /inference="COORDINATES: protein motif:HMM:NF012612.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73247.1"
                     /translation="MHIANGMYGAIIVDPARPRPKAREFVFVQSEFYLTPKPASNGTR
                     SLEWERLLSGAPDHVVFNGRANQYASHPIQVRPNELLRLYLVNAGPNRISSFHVVGAI
                     FERVFQDGSQASPLVGVQTVNVPVGGGSIFELRLRQSGDYPFVTHAFADATKGGVGVL
                     RAVARGESPSGKAAAGH"
     gene            709..1407
                     /locus_tag="VFD73_04335"
     CDS             709..1407
                     /locus_tag="VFD73_04335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT family protein"
                     /protein_id="HZI73248.1"
                     /translation="MRTVHPELHRTERIGWLRAAVLGANDGIVSTASLVLGVARAEAS
                     RSAVLVAGVAGLVAGAMSMAAGEYVSVSSQADTEKADLERERGELAASPAAEHAELAR
                     FYQQRGLSADLAAEVASQLMARDALGAHARDELGITAALTARPIQAALTSALTFAVGA
                     ALPLLIATLSPKHSLVPWVAGASLLCLGTLGGVAARAGGAPPWVGVVRVVFWGALAMG
                     LTAAIGGLFGTSAG"
BASE COUNT          226 a          491 c          502 g          283 t
ORIGIN      
        1 gatgcacatc gccaacggga tgtacggcgc catcatcgtc gacccggcac ggccccgccc
       61 caaggctcgg gaattcgtct tcgtacagag cgagttctac ctgactccga agccggcgtc
      121 gaatggaacg cgaagcctcg agtgggagcg cctgctgagc ggggcacccg atcacgtggt
      181 cttcaacgga cgagccaacc agtacgcatc ccatccgatt caggtccgac ccaacgagct
      241 gctgcgcctg tacctggtga atgccggccc caaccgaatc agctccttcc acgtggtcgg
      301 cgcgatcttc gaacgcgtct tccaggatgg ctcccaagct agtccgctcg taggggtcca
      361 gaccgtcaat gttccggttg ggggaggcag catcttcgag cttcggctcc ggcagtcggg
      421 cgactatccc tttgttaccc acgctttcgc cgatgcaacc aagggaggag tcggagtgct
      481 gagagcagtc gctcgagggg aaagtcccag cgggaaggcg gctgcgggcc actaatgtct
      541 gttcttcagc acgagggcaa ccaaccgccg ccggtacgag gcattactcg gctccagtgg
      601 ttgatctgga tcgctgcact ctgggccgcg atattcccgg gcctgacctg gtcgctggca
      661 gttttctttc agaggctcgc gggcccgcag ctgcgcgagg ttccttgaat gcgcaccgtt
      721 catcccgagc tgcaccgcac cgagcgcatc ggctggctcc gcgctgctgt cctcggcgcc
      781 aacgacggaa tcgtatccac cgcaagcctg gtgctcggtg tcgccagggc cgaggcctcc
      841 cgctcggctg tgctcgtggc cggagtggcc gggctggtcg cgggggccat gtcgatggca
      901 gcaggggaat acgtgtcggt gagctcccag gccgacacgg agaaagccga cctcgagcgc
      961 gagcggggcg agttggctgc tagtcccgcc gcggagcacg cggagctggc ccggttttat
     1021 cagcagcgcg gtctgtcggc tgatctggcg gccgaggtcg ccagccagtt gatggcgcgc
     1081 gacgccctcg gcgcgcatgc tcgcgacgag ctgggaatta cggcagcgct cactgctcgc
     1141 ccgattcagg cggcactgac gtcggccctt acctttgctg tcggcgcggc gttgccctta
     1201 ctcatcgcaa cgcttagccc taagcactcg ctggtccctt gggtggctgg tgcttcgctt
     1261 ctctgcctcg ggacgctggg cggagtggca gcgcgggcag gcggggctcc gccgtgggtg
     1321 ggagtagttc gggtggtgtt ctggggcgcg ctcgccatgg gcctcaccgc ggcaatcggc
     1381 gggctcttcg gcaccagtgc cggctgagga cttcttgatc gcggcgtatt cgaccatctg
     1441 agacccgtcc ggagtcccct gcctgccgca actcagccgt tggtttatcc gcactgccct
     1501 cg
//
LOCUS       DASRPQ010000370         1207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3185029, whole genome shotgun sequence.
ACCESSION   DASRPQ010000370 DASRPQ010000000
VERSION     DASRPQ010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3185029"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..203)
                     /locus_tag="VFD73_04340"
     CDS             complement(<1..203)
                     /locus_tag="VFD73_04340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HZI73249.1"
                     /translation="MADDIQTRLSAEGADPLLFAGVNDSNLQELQRALGVRVSFRGEA
                     VTLSGSPEQLERAGPVVQGLLDLA"
     gene            complement(259..>1207)
                     /locus_tag="VFD73_04345"
     CDS             complement(259..>1207)
                     /locus_tag="VFD73_04345"
                     /inference="COORDINATES: protein motif:HMM:NF012379.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HZI73250.1"
                     /translation="SLSLPIPRMRHADALERFGTDKPDLRFGLEIFDATEVFRSAEFS
                     VTRAAIGSGGRVRGIRVPGGARLSRKQLDELEAAAKSLGAAGLLRLKAADGALEGPAA
                     KFLPPDAAARLGLDHADLGLFVAGPDRVSNPSLDRLRLETARRMGLIREAENRFVWII
                     DFPLFEKDPVSGALTSVNHPFTAPHPDDVGLLEMAPERVRALAYDMVLNGTELGGGSL
                     RIADPSLQRRVFALLGIGEQQAEERFGFLLEGLRAGAPPHGGFAFGLDRIVMLLAQAD
                     SLRDVIAFPKTTAQRALFEGAPTRVDQADLSELHLEIKE"
BASE COUNT          223 a          401 c          384 g          199 t
ORIGIN      
        1 gccaggtcca gcaggccctg tacaaccggg ccggcgcgct ccaattgttc cggcgagccc
       61 gagagggtca ccgcttctcc ccggaaggaa accctcacgc ccagggcgcg ctgcagctcc
      121 tgcaggttgc tgtcgttcac gccagcaaac agcaagggat ccgccccttc ggcggagagt
      181 ctggtttgga tgtcgtcggc catactctaa gctaagctct gggcggtgag cggtaagcgg
      241 gatggcgaaa gtctgagctc actcctttat ctccaggtgg agctcactga gatccgcctg
      301 atccacccgg gtcggggctc cctcgaagag ggcccgttgg gccgtcgtct tgggaaaggc
      361 aatcacgtcc cgaagcgaat cagcctgggc cagcaacatg acgattcggt ccagcccgaa
      421 ggcaaagccg ccatggggcg gtgcgccggc cctgaggcct tcgagcagga agccgaaccg
      481 ctcctctgcc tgctgctcgc cgattcccag caaggcaaac acccgccgct gcagcgacgg
      541 atcggcaatt ctgagacttc ctccccccag ctcggttccg ttgaggacca tatcataggc
      601 cagcgcacgc actcgctcgg gggccatttc cagcaacccg acgtcatcgg ggtggggtgc
      661 ggtaaacgga tgattgaccg aggtcagggc accactgact gggtcttttt cgaacagcgg
      721 aaaatcgatg atccagacga agcgattctc ggcttctcgg atcaggccca tccggcgagc
      781 ggtctccagc cgcagtcggt ccagcgaagg attggagact cggtccggac cagcgacgaa
      841 caagccgagg tcggcatggt ccaggccaag ccgggccgca gcgtctgggg gcagaaactt
      901 cgccgctggt ccctccagtg ctccgtccgc cgccttgagg cgcagcagcc ccgcggcgcc
      961 cagggatttt gccgctgcct cgagctcatc gagctgcttg cgggagagcc tggcgccgcc
     1021 gggcacccga atgcctcgga cccggccgcc ggatccgatc gcggcgcgcg tcaccgaaaa
     1081 ctcggcgctt cgaaagactt cggtggcgtc gaaaatctcc agcccgaacc gaaggtccgg
     1141 cttgtccgtc ccaaagcgtt ccagagcatc cgcgtgacgc attcgcggga ttggcagcga
     1201 cagtgag
//
LOCUS       DASRPQ010000371         1227 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4429609, whole genome shotgun sequence.
ACCESSION   DASRPQ010000371 DASRPQ010000000
VERSION     DASRPQ010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4429609"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /locus_tag="VFD73_04350"
     CDS             complement(<1..240)
                     /locus_tag="VFD73_04350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73251.1"
                     /translation="MWAKGLFSTEAAVELLIGHGLWLCREDFLEIAVEFGWEIADGVV
                     LAAVDWDAAVAALEAGGLPCSGGEGRIQRLAASVAS"
     gene            315..>1227
                     /locus_tag="VFD73_04355"
     CDS             315..>1227
                     /locus_tag="VFD73_04355"
                     /inference="COORDINATES: protein motif:HMM:NF013511.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006397 - mRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZI73252.1"
                     /translation="MLSILAEKIHDNRFLRLMRNMLKAGYLEDWRWNATLSGVPQGGV
                     VSPVMSNIYLHKLDNFVETVLIPEYTRGGRRRQSANYARVRAARDRAHRRGDRDTARQ
                     LRKQLRGMPSGDPHDPGYRRLQYCRYADDTLLGFIGPKAEAEEIKQRLAAFLRDDLKL
                     ELSPGKTLITHARTQAARFLGYEITVLHNDRKVTRGIRRANGTVSLRVPAAVIKAKSA
                     PYLARGKPARRPQLRNEDDHTIVSVYGAEYRGIVQYYLLAGNVSRLYRLHWVMETSLL
                     KTLADKHRSSVTAMARKHKAVADTPSGP"
BASE COUNT          250 a          438 c          370 g          169 t
ORIGIN      
        1 gctggcgacg ctcgcggcca gccgctggat ccgcccctcc ccacccgagc acggcaaccc
       61 gcccgcctcc agcgcggcca ccgccgcatc ccagtcgaca gccgccaaaa ccacgccatc
      121 tgcgatttcc cagccgaatt ccacagctat ttccaggaaa tcctcgcggc aaagccacaa
      181 gccatgcccg atcagcagct caaccgctgc ctccgtgctg aacaggcctt tcgcccacac
      241 ccgcagcgct gctgcgaggt catcgaagca cgtagtaagc cgggggttct tttgggagcc
      301 ttgaccacaa ggtcatgctc tcgatcctgg cggagaagat ccacgacaac cggttcctgc
      361 gactgatgcg gaacatgctc aaggcgggat acctggagga ctggcggtgg aacgcgacgc
      421 tgagcggggt tccgcaaggc ggcgtggtct cacccgtcat gtccaatatc tacctgcaca
      481 agctggacaa cttcgtcgag acagttctga tcccggaata cacccgaggc gggcgcagga
      541 ggcaaagtgc caactacgcc agggtgcgcg cggcccgtga ccgggcacac aggcgaggcg
      601 accgcgacac ggcacgccag ctgcgtaagc aactgcgcgg catgcccagc ggagacccgc
      661 atgatcccgg ttaccggcgg ctgcagtact gccgctacgc cgacgacacc ttgctcgggt
      721 tcatcggacc gaaggccgag gccgaggaga tcaaacagcg cctcgcggcg ttcctgcgtg
      781 atgacctcaa gctggaactg tcgccaggca agacgctgat cacgcacgcc cgcacccagg
      841 cggcgcgatt cctcggctat gagatcaccg tgctgcacaa cgaccgcaag gtcacccggg
      901 gcatccgcag agccaacgga accgtcagcc tgcgggtccc ggcagcggtg atcaaggcca
      961 agagcgcccc ttacctggcg cgcggcaaac ccgcgcgacg gccccagttg cgcaacgagg
     1021 acgaccacac catcgtcagc gtctacgggg ctgagtaccg gggcatcgtc cagtactacc
     1081 tgctagccgg gaacgtctca cggctgtacc ggctgcactg ggtcatggag acctcgctgc
     1141 tgaagaccct ggcagacaag caccgctcct cggtcacggc gatggcccgc aagcacaagg
     1201 ccgtcgccga cacgccgagc gggccac
//
LOCUS       DASRPQ010000372         2441 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2235213, whole genome shotgun sequence.
ACCESSION   DASRPQ010000372 DASRPQ010000000
VERSION     DASRPQ010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2235213"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(345..719)
                     /locus_tag="VFD73_04360"
     CDS             complement(345..719)
                     /locus_tag="VFD73_04360"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI73253.1"
                     /translation="MPTVLLVDDERPVRSALRRIFEHGGLTVREAESGRDALEALAKD
                     PGIDAVVSDFIMPELDGVDFYDALVARSPHLRNRVVFLTGAARNPTVYQPLEDRGVPL
                     INKLEDLQIVLDAVRLVLLRTD"
     gene            900..2153
                     /gene="tig"
                     /locus_tag="VFD73_04365"
     CDS             900..2153
                     /gene="tig"
                     /locus_tag="VFD73_04365"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HZI73254.1"
                     /translation="MTPITVEKTAEDSASKSLHVTVPVDRVREAEARALKYYAKRARL
                     PGFRPGKAPDTVVRKRFGDAIRQTVLEEVIRESWETAKTSESLKPVTDPSIRNLKFEE
                     GSPIEFELHVEVRPDLKLERIGGFKLERQVAPVPDSAVDEQVARIQEHKAAWIPVDGE
                     KPSPGHMVRVEVAPVENGVPGNAQPHDLVLGQNQAIPELEEQIMRLLPGESTETEVRF
                     PEDHPDESRRGQTRRVKITLHEVKRQELLPLDDALASEAGDFESLEVLRSTIREDLDR
                     EAVRDADAAVRQKLLAQIVEANRVEAPHSLVHRLLHGYAEMYKVPEDQLATFEQQFQP
                     IAENQVKRDLVLDAIVETHGLRATEADLDERVNAIAAARGTPAGQVYASLQKANRLQE
                     LERSITEEKVFDFLLKQSTIEEVKP"
     gene            2156..>2441
                     /locus_tag="VFD73_04370"
     CDS             2156..>2441
                     /locus_tag="VFD73_04370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HZI73255.1"
                     /translation="MATLYPPYIIERSSRGERTYDIFSRLLMDRIVFLGAPINDDVSN
                     IIIAQLLFLEADNPDKDIYLYINSPGGVVSAGMAIYDTMQHLRAPVNTICM"
BASE COUNT          519 a          768 c          756 g          398 t
ORIGIN      
        1 tgcagtggta ctctccggtt gcgtcgcaga tgactgcgcc agcgctagtc ccgggtgttc
       61 catcgcgagg aacgtaacca gcgcggctgc cggtagaatg cgtatgaacc gatacatgtt
      121 ctccactccc caagctgaaa cttcgcccag caacatcagt cggcgaagac aatgaggtca
      181 ccctcaggca acaatgccgg cgacacacac caggaaggca accagcatgc cacgagtgcg
      241 ttggggcgta aacgccgcag cggcgggtca cgtggcgtcg tggaccgtgg aggggcgaca
      301 aaaatgtaga gacgacgcga gagtttctac ggaattgtct gagcctagtc agtccgaagg
      361 agcaccaggc gaaccgcgtc caggacgatc tgtagatcct ccagcttatt gatcagcgga
      421 acgccgcgat cttcgagcgg ctgatacacg gtgggatttc gggcagcgcc cgtcaggaac
      481 acgacccggt ttcttagatg gggcgaacgg gcgaccagcg catcgtagaa atcaacacca
      541 tccagctccg gcatgatgaa gtcgctcacc acggcgtcga tgccggggtc cttggccaga
      601 gcctcgagcg cgtcgcggcc ggactccgcc tcccgcaccg taagaccccc gtgctcgaaa
      661 atccggcgga gcgcactccg aaccgggcgc tcgtcgtcta ccaggaggac ggtcggcacg
      721 aggcagagtg ggcgacacgg ctcatgcgtt ctccatgcag acagggtgcc ggcagtgcgc
      781 tccggtcgcg ccgaatttgc cgtacatcgg gatgctctgc aaccggaggg gagtgcaacg
      841 gactgcgcgg cccgccaaaa ttgaccctga ggatcacgcc agggtagatt ccccgcacaa
      901 tgaccccgat taccgtcgag aaaaccgccg aagattccgc ctccaagtcg ctgcatgtga
      961 cggtaccggt cgatcgcgtc cgcgaagccg aagccagagc cctcaagtac tacgccaagc
     1021 gtgccaggct tcctgggttc cgcccaggaa aggcccccga tacggttgtc cgcaagcgct
     1081 tcggtgacgc catccgtcag acggtgttgg aagaggtcat tcgcgaaagc tgggagaccg
     1141 ccaaaaccag cgaatcactg aagccggtca ccgatccttc catccgcaat ctcaagttcg
     1201 aggaaggcag tccgatcgag ttcgagctcc acgtcgaggt ccgtcccgac ctcaagctgg
     1261 agcggatcgg cgggttcaag ctggagcgcc aggtggcgcc ggtccccgac tcggcagtgg
     1321 acgagcaggt ggcccggatc caggagcaca aagccgcctg gatccccgtg gatggtgaaa
     1381 aaccgtcacc cggacacatg gtgagggtcg aagtggcgcc ggtggaaaac ggggtgccgg
     1441 gtaacgcgca gccgcacgac ctcgtcctcg gccagaatca ggccattccc gagctggaag
     1501 agcagatcat gcgcttgctg ccgggcgaga gcacggagac agaggttcgt tttcccgagg
     1561 accatcccga cgaatcccgc cggggccaaa cccgccgagt caagattacg ctgcatgagg
     1621 tcaaacggca ggagctccta ccactcgatg atgctctggc gagcgaggcg ggagacttcg
     1681 agagtctgga ggtgctccga tccaccatcc gggaagacct cgaccgggag gccgtgcgtg
     1741 acgccgacgc ggcggtgcgg cagaagctgc ttgcccagat cgtcgaagcc aaccgggtgg
     1801 aggcaccgca ttcgctggtg caccgactgc ttcacggtta tgccgagatg tacaaggtcc
     1861 ccgaagacca gctcgccacc ttcgagcagc agttccagcc aatcgcggag aatcaggtca
     1921 agcgtgatct ggtgctcgat gcgatcgtgg agacccacgg ccttcgcgcc accgaggccg
     1981 atctggacga acgggtaaac gccattgccg ccgcccgcgg cacgccggcc gggcaggtct
     2041 atgcctccct gcagaaagcc aaccggctgc aggagctgga gcggtcgata acggaggaga
     2101 aggtgttcga ctttctcctc aagcagtcca ccatagaaga ggtcaagccc tgacgatggc
     2161 cactctgtat ccgccctata tcatcgagcg ttccagccgc ggcgaacgga cctacgacat
     2221 cttttcccgg ctgctgatgg atcggatcgt ctttctcggc gcaccgatca acgacgatgt
     2281 ctccaacatc atcattgcgc agctcctgtt tctcgaggcg gacaatccgg ataaggacat
     2341 ttacctgtac atcaactctc cgggcggcgt cgtctccgcc gggatggcca tctacgacac
     2401 catgcagcac ctgcgcgccc cggtgaacac gatctgcatg g
//
LOCUS       DASRPQ010000373         2610 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3185586, whole genome shotgun sequence.
ACCESSION   DASRPQ010000373 DASRPQ010000000
VERSION     DASRPQ010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2610
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3185586"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1024
                     /locus_tag="VFD73_04375"
     CDS             <1..1024
                     /locus_tag="VFD73_04375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73256.1"
                     /translation="AMKELGGGTLHLHGMASAEPLTIGAQGYPLLLQTGEAYRGAPLH
                     DRQHPHDLFMELSVMYERPLTRELGFMIYAAPDGEPGIGPVAYMHRPSALNDPFAPLA
                     HHWTDATHITYGVLTAGLFTRTMKLEGTLFNGREPDEHRYDFDFHPLDSYGARLSFNP
                     TPQWAISASYGCLKQPEELRPDENQHRIGISVLHSIRLGRRAEWASALIYGGNKHAPA
                     TAGGTAGWEHSVIAESNLQLDRFNSVFGRVEYVRKSAEELAVQTTEDNGEFGLGALVL
                     GYIREFAAFSGATMGIGARGALNRVPRSLEDVYGGRTPAGLAVFLRVRPALLDGSHMM
                     HDMDGM"
     gene            1117..2472
                     /locus_tag="VFD73_04380"
     CDS             1117..2472
                     /locus_tag="VFD73_04380"
                     /inference="COORDINATES: protein motif:HMM:NF021446.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2157 domain-containing protein"
                     /protein_id="HZI73257.1"
                     /translation="MPKRAITPKQRAWLLDELTVWRSGAIVSEQQAQRIADLYEGAGE
                     LAERGRSRAVFTLMAAAATLVGLAALLLIGYNWAQLSRESKLLIVLGTIGITHWAGFT
                     LRYRRNARALSETVFFLGCLFYGAGIWLVAQAFHISAHYPDGVWWWAVGVLPFALCLE
                     TRLLHVLVVSLLAVWAGMEVLNFGYLGAWLFGWRWGALPNGAYTLPLLALPGILWAYR
                     NQSVQTVGLYVPLLAWWTVLQVFAWHVSSNPIYFIGGVGALLLVIAECHARGSRFAIP
                     YRYYGSLLVGGALVPLSFLSLHKHLADGRFIAVAPSLLLATSAVGIVLLTQRTIPQRQ
                     TIPLGLSLLMTLLPVIATISRSGAVDAGTAALMPTVLVNLAMLAGAFWLMQVGLREDR
                     GRPFSAGVLYFLLWAVLRYVDLFGNLGGMLGAALMFFACGGALFLVGRYWQSRKEVRY
                     A"
BASE COUNT          417 a          817 c          854 g          522 t
ORIGIN      
        1 ggcaatgaag gagctgggtg ggggcaccct gcacctgcac ggcatggcga gcgcggagcc
       61 gcttacgatc ggtgcccaag ggtatccact cctgctgcag accggcgagg cgtatcgggg
      121 tgcgccgctc cacgaccggc agcatccgca cgatctcttc atggagctgt ccgtgatgta
      181 cgagcggccg ctcaccagag agctaggatt tatgatttat gccgctccgg acggcgagcc
      241 gggcatcgga ccggtggcct acatgcaccg tccgtcggcc ctcaacgatc cattcgctcc
      301 gctggcccac cactggaccg acgccacgca catcacctat ggagtgttga ccgcgggact
      361 gttcacccgg acgatgaagt tggagggcac gctcttcaat ggcagggaac cggacgagca
      421 tcgctacgac ttcgattttc atcctctgga ctcgtacggc gcacgcctct ccttcaatcc
      481 gacgccgcag tgggcaatca gcgcgagcta tggctgcctg aagcagccgg aagagctccg
      541 tcccgacgag aaccagcatc gaatcggcat ctcagtactg cactccatcc ggctcggccg
      601 ccgggccgag tgggcctcgg ctctcattta tggcggcaac aagcacgcac ccgccaccgc
      661 tggtggaact gccggatggg agcacagtgt catcgccgag tccaacctgc agctggatcg
      721 attcaacagc gtgttcgggc gagtcgagta cgtgcggaag agcgccgagg agctggccgt
      781 gcaaaccact gaagacaacg gagagttcgg cctcggtgcc ctcgtgctgg ggtacatccg
      841 cgagtttgcc gccttcagcg gcgcgaccat gggcatcggt gcccggggcg cactcaaccg
      901 ggtgcctaga tcactggagg atgtgtacgg tggcaggact ccagcgggac tggcggtgtt
      961 cctccgcgtg cggccggcgc tgctcgacgg atcgcacatg atgcatgaca tggatggaat
     1021 gtgatgtccg ggttgctcat cgtttcagtt tcaccctgcg aatgccgaaa atagaagcgt
     1081 ccccctctcc acctcggatc gcgtgcgagc acccacatgc cgaagcgagc gataaccccg
     1141 aagcagcgtg cctggctgct ggacgagctc accgtttggc gcagcggcgc gatcgtctcc
     1201 gagcagcagg cccagcgcat cgccgacctt tacgagggtg cgggagagct ggccgaacgc
     1261 ggccggtcgc gggcggtgtt cacgctgatg gcggcggccg cgaccctcgt cgggttggct
     1321 gcactgcttc tgatcggcta caactgggcg cagctctccc gtgagagcaa gctcctcatt
     1381 gtcctcggca cgatcggaat tactcactgg gccggattca cgctgcgtta tcggcggaac
     1441 gcgcgtgcat tatccgagac tgtcttcttc ctgggatgcc tcttctatgg agcaggaatc
     1501 tggctggtag ctcaggcctt ccacatcagc gcgcactatc ccgacggcgt ctggtggtgg
     1561 gcggtaggag tcctgccgtt cgcgctctgc ctggagactc ggctgctcca cgttctggtg
     1621 gtctcgctcc tcgccgtgtg ggccgggatg gaggtgctga acttcggtta tctaggagct
     1681 tggctcttcg gatggcgctg gggagctctc ccgaacggcg cctacaccct gccgctcttg
     1741 gcgctgccgg gaattctctg ggcgtatcgt aaccagtcgg tgcagacggt agggctatac
     1801 gtcccgcttc tggcctggtg gacggtgctc caggtctttg cctggcatgt gagctccaac
     1861 ccgatctact tcatcggcgg cgtcggcgcg ctcctgctgg tcatcgcgga gtgccatgcc
     1921 agagggagcc gctttgccat tccctatcgc tactacggaa gcctcctggt tggaggcgcc
     1981 ctagtgccgc tcagcttcct cagtcttcac aagcatcttg cggatggtcg cttcatcgcg
     2041 gtcgcccctt ccctgctcct cgcgacgtcg gccgtcggca tcgtactgct gacccagcgg
     2101 accattccgc agcggcagac gatcccgttg gggctttcgc tgctcatgac gctccttccg
     2161 gtgattgcga cgatctcccg gagcggcgct gttgatgccg ggaccgcggc gctgatgccg
     2221 accgtgctgg tgaacctggc gatgctcgcg ggggcgttct ggctgatgca ggtgggactc
     2281 agggaagacc gcggccgacc gttcagcgcc ggcgtgctgt acttcctgct ctgggcggtg
     2341 cttcgctacg tggatctgtt cggcaacctg ggcggaatgc tcggtgcggc gctcatgttc
     2401 tttgcctgtg gcggcgcgct cttcctggtc ggccggtatt ggcagagccg aaaggaggtt
     2461 cgctatgcgt gaggcgacgg cgcggccaat cgatatcgat ctgggatgga tcaaggccag
     2521 agaaaagaag atcctgctgg tgaccgcggc ggttcagcta ctgatcctgg tagcgatgat
     2581 cgccgtccgg gcgatgccgc tgatgaccgg
//
LOCUS       DASRPQ010000374         1445 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1930317, whole genome shotgun sequence.
ACCESSION   DASRPQ010000374 DASRPQ010000000
VERSION     DASRPQ010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1930317"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1413)
                     /locus_tag="VFD73_04385"
     CDS             complement(<1..1413)
                     /locus_tag="VFD73_04385"
                     /inference="COORDINATES: protein motif:HMM:NF013123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DPP IV N-terminal domain-containing protein"
                     /protein_id="HZI73258.1"
                     /translation="MPSRPVLWALVLFPLLASTLPAQDSLTVERIFNSHDFAPERLGQ
                     VRWLEKEAAYVKLEADSATGGQELVRYDAATGRRQVWIPAARLVPKGDSMPLTVEDYA
                     VSPDQQRLLIFTNSQKVWRQNTRGDFWSLDLSSWQLRKLGGAQAKPSTLMFAKFSPDG
                     NRVAYVRENNLYVENLADGGITQLTHDGSRTIINGTFDWVYEEELNLRDGFRWSPDGT
                     RIAYWQLDASGVRDFLLINNTDSLYSFTIPVQYPIAGTTNSAARVGVVSASGGNTVWL
                     AVPGDPRNKYIARMDWSGSSAEVGVQQLNRLQNTLTVMLGDANTGQVRTVHTERDSAW
                     VDVGNDLRWLGGGKNFTWISERDGYRHLYLISRDGKQQRLLTPGNFDLHSPASSFGEP
                     FVLGQDSARGWIYFTASPENATQLYLFRSRIDGKGRPERVTPKTQAGYHGYYISSDAR
                     WAIHGYSSFGTPQRVELISLP"
BASE COUNT          260 a          440 c          479 g          266 t
ORIGIN      
        1 ggggagactg atcagctcga cccgttgtgg agttccgaat gacgagtagc cgtgaatggc
       61 ccagcgggca tcgctggaga tgtagtagcc gtgatagccg gcctgcgtct tcggagtcac
      121 ccgctcgggc cgccccttgc cgtcgatccg gctccgaaag agatagagct gggtggcgtt
      181 ctccggcgac gccgtgaagt agatccagcc ccgagccgag tcctgtccca gcacgaacgg
      241 ctcaccaaag gaactggcgg gactgtgcag gtcgaagttg cccggggtca gcaggcgctg
      301 ctgctttcca tcgcgggaga tgagatagag atggcggtag ccgtcccgct cactgatcca
      361 ggtgaagttc tttccgccgc cgagccagcg caggtcgttt cccacatcca cccaggcact
      421 gtctcgctcg gtgtgcaccg tccgcacctg gccggtgttg gcgtctccca gcatcaccgt
      481 cagcgtgttc tgcagtcgat tgagctgctg gaccccgacc tcagccgagc ttcccgacca
      541 atccattcgg gcgatgtatt tgttgcgggg atcgcctgga acggcgagcc agacggtgtt
      601 gccgcccgac gcgctcacca cgcccacccg cgccgccgag ttggtggtac cggctatggg
      661 gtactgcacc ggaatggtga aggagtagag cgagtcggtg ttgttgatca gcaggaagtc
      721 gcggacgccg gatgcgtcga gctgccaata ggcgatgcga gtgccgtcgg ggctccagcg
      781 gaacccgtcg cgcagattca gttcttcctc gtagacccag tcgaaagtcc cattgatgat
      841 cgtgcgagag ccgtcatggg tgagctgggt gatgccacca tcggcgagat tctccacata
      901 caggttgttc tcccgcacgt acgccactcg atttccgtcg ggcgaaaact tggcgaacat
      961 gagggtcgaa ggcttggcct gagcgccccc cagcttccgg agctgccagc ttgagagatc
     1021 gagcgaccag aagtcgcccc gggtgttctg ccgccacacc ttctgcgagt tggtgaagat
     1081 caggagcctc tgctgatcgg gcgagacggc gtaatcctcc accgtgagag gcatcgagtc
     1141 acccttcggg accagtctgg ctgcggggat ccagacctga cgcctgccgg tggcggcatc
     1201 atagcgaacc agctcctggc caccggtcgc gctgtcggcc tccagcttca cgtacgccgc
     1261 ttccttctcc agccagcgaa cctggcccag ccgctcggga gcaaaatcgt gggagttgaa
     1321 gatccgctcg acggtgaggc tgtcctgggc ggggagggtg gaagcgagca atgggaagag
     1381 gaccagggcc cagagcacag gacgagaagg cattgacatc tccggcgggt cggggtggtg
     1441 tgact
//
LOCUS       DASRPQ010000375         2331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2562128, whole genome shotgun sequence.
ACCESSION   DASRPQ010000375 DASRPQ010000000
VERSION     DASRPQ010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2331
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2562128"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..882
                     /locus_tag="VFD73_04390"
     CDS             <1..882
                     /locus_tag="VFD73_04390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73259.1"
                     /translation="SRLAERQLQVQEELRQGQPSAATRAEQAAIEEGVRKILDQVKQA
                     GGKNALVSPQIAGALGAAELQMQQAREAISSAAPNVREAADQAGGAVDALNAAAHQLM
                     RARDDVSGSQSGSGLAEALERMAQLAQQQGGLGKQAAGLLPMAGAGGMQQQLQQLAAR
                     QRALSQELEKLRAQGRISGAGQMADEAKDLSRRMEAGKLDRQVVERQERLFRRMLDAG
                     RTLQGHEEDLKKERQSTPATDDSVHVPPALRARLQDENDRLRVPSWEELQRLSPEERR
                     LVVDYFRRLSLLLEVNQ"
     gene            879..>2331
                     /locus_tag="VFD73_04395"
     CDS             879..>2331
                     /locus_tag="VFD73_04395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73260.1"
                     /translation="MTRFLRSAVLLSLLVPAALASQQPAGLTQALDLERRGDYAAAVD
                     AYKSVLRARPADPSALLGLERCLLPLNRSGEMIPVAQTALAAAPANPAVYGIALRTWA
                     AAGRMDSVRSIATRWATIAPTDETPYREWGGAELGRENRAGARAAYLLGRSRLGRPDA
                     LAGELAQLAAAEGDYPSALEEWLLATRRYPGYLGSAVATLGQAPDAVHENLLRTLSKD
                     SDFPARRLEAELRAHWGDPEGAVRVLTGALPSDRIQAIAALRGLLDRLHELRSPEGKL
                     AEGRVLEALADRFPASQAARFRLDAAQAYSVGGDKGSARRMLGGLASDRNTPASISSD
                     AAATLVRVLIGEGKLADAQKRLADARAALDPDDFDALRRELVTAWMRSGELARADSAI
                     APDSSVEGLALGGRVRLYRGDISGAIERFKEAGPFIQDREEATQRTALLALLQPLERD
                     SFPELGHALLLLEQGDTSGAAGALQQLTTGLPPE"
BASE COUNT          412 a          736 c          816 g          367 t
ORIGIN      
        1 agccggctcg cggagcggca gctgcaggtg caggaggagc tccggcaggg ccaaccgagt
       61 gccgccaccc gagcggaaca ggcggcgatc gaggaaggcg tcaggaaaat tctcgatcag
      121 gtaaagcagg ccggcggaaa gaacgcactc gtatcgcccc aaatcgccgg agcgctgggc
      181 gcggccgagt tgcagatgca acaagcccgg gaggcgattt cctccgccgc accaaacgtc
      241 agggaggcag cggaccaggc tggcggggcg gtcgatgctc tgaatgcagc ggcccaccag
      301 ctgatgcggg ccagggatga tgtctccgga tcgcagtcgg gctctggcct ggcggaagcg
      361 ctggagcgaa tggcgcagct ggcccagcaa cagggtggcc tcggcaagca ggctgccggc
      421 ctgcttccga tggcgggggc tggagggatg cagcaacaac tgcaacagct cgccgctcgg
      481 caacgtgccc tgagtcagga gctggaaaag ctgcgcgccc aggggcgcat ttcaggggcg
      541 ggccagatgg ccgatgaggc caaggacctc tcccgccgga tggaggcagg caagcttgat
      601 cgtcaggtcg tcgagcgaca agagcgatta ttccgaagga tgctcgacgc aggacggacc
      661 ttacagggac atgaggagga tctcaagaag gaacggcaaa gcactcccgc aaccgacgac
      721 agcgtgcacg ttcctccggc gctccgcgcc cgcttgcagg acgagaacga tcgcctgcgg
      781 gtccccagtt gggaggagct gcagcggttg tcgccggagg agcggcggct ggtggtagat
      841 tacttccgcc gcctgtcgtt gttgctcgag gtaaatcaat gacccgcttt ctgcgcagcg
      901 ccgtgctcct gagcctactg gtcccggccg ctctcgcctc ccagcagcct gccggcctga
      961 cccaagcgct cgatctggag cgacgcggtg attatgcagc ggcggtcgat gcgtacaaat
     1021 cggtgctgcg ggcgcggcca gcggatccat cggcccttct cggactcgag cgttgtctcc
     1081 ttccactcaa tcgaagcggg gaaatgatcc ccgtggcaca gacggcactg gccgccgcac
     1141 cggcgaatcc ggcggtgtac ggcatcgcac tccgcacctg ggcggccgcc gggcgaatgg
     1201 attcggtgcg cagcattgca acccgctggg ccacgatcgc tcccacagat gagacgccct
     1261 atcgggagtg gggcggcgcc gaactgggcc gggaaaaccg ggcgggggct cgggcggcct
     1321 atttgctggg gcgctcacgc ctgggccgcc ctgatgcgct tgcgggggaa ctggcacagc
     1381 tggccgctgc cgaaggcgac tatccgtccg cgttggagga atggctcctg gccacgcggc
     1441 ggtatcctgg atatctcggg tcggcggtcg cgacattggg gcaagccccc gacgcagtcc
     1501 acgagaacct cctgcggacc ctgtcgaaag actccgactt cccggctcgg cggctggagg
     1561 cggagcttcg cgcgcactgg ggcgaccccg aaggcgcagt tcgagttctc actggcgcat
     1621 tgccttccga ccggatccag gccatcgccg ctcttcgcgg cctgctcgac cgccttcatg
     1681 aattgcggtc acccgagggt aagctggcgg agggccgtgt actggaggca ctggccgacc
     1741 gtttcccggc ttcacaggcg gcacggtttc ggttggacgc agctcaggcc tattcggtcg
     1801 gcggcgataa aggaagtgcc cgccgcatgc tgggtggtct cgccagcgac cggaataccc
     1861 cagcatccat ctcctccgat gcagcggcga cgctggtccg agttcttatc ggtgagggca
     1921 agttggccga cgcgcagaag cgcttggcgg atgcgcgggc ggcattagac cccgacgact
     1981 tcgacgcgct gcggcgagag ctggtgaccg cctggatgcg aagtggtgag ctggcacgcg
     2041 ccgactccgc cattgcgccc gacagcagcg ttgaagggct ggctcttgga ggaagagttc
     2101 gtctttatcg gggcgatatc tcgggggcca tcgaacgatt caaggaagca gggcccttta
     2161 tccaggatcg cgaagaggcg acgcagcgaa ccgcgctgct tgcgcttctg cagccactcg
     2221 agcgcgactc ctttcccgag ttgggtcatg cgctccttct cctcgagcag ggagacacca
     2281 gcggagccgc cggagcacta cagcagctga ccacggggtt gcctcccgaa c
//
LOCUS       DASRPQ010000376         2343 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2862975, whole genome shotgun sequence.
ACCESSION   DASRPQ010000376 DASRPQ010000000
VERSION     DASRPQ010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2343
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2862975"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(297..1208)
                     /locus_tag="VFD73_04400"
     CDS             complement(297..1208)
                     /locus_tag="VFD73_04400"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase domain-containing protein"
                     /protein_id="HZI73261.1"
                     /translation="MISLPVRYRSDEEDSARWIGFPFREGDIVISTRSKTGTTWVQMI
                     CALLIFQTPELPEPLGRLSPWLDHLITPREEIYARLDRQQHRRFVKTHTPLDGIPLDP
                     RATYIVTARHPLDMAVSLYHQGNNIDRSRVRQLTGQSEPAAPPPARPQLRQWLLEWIG
                     DDANPREKMDSLPGVMWHLSDAWDRQSQLNVLLVHYDDLLRDLDGEMRRLARRLGATV
                     PEQAWPSLVQAATFEQMRARADQFVTAGGLLKSTAAFFRRGRSGAGQEILTDAEIDHY
                     HQRAAQLAASDMLAWLHCADHSRPSSA"
     gene            complement(1381..1584)
                     /locus_tag="VFD73_04405"
     CDS             complement(1381..1584)
                     /locus_tag="VFD73_04405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73262.1"
                     /translation="MAGYGVPAVVVPHCKPQLASYPAFAASLETLRGMGVRVLFDPDA
                     PYECRLPPWSEVVDALPVRAGTS"
     gene            complement(1637..1798)
                     /locus_tag="VFD73_04410"
     CDS             complement(1637..1798)
                     /locus_tag="VFD73_04410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73263.1"
                     /translation="MVFCTPTGIRFIDAAELEQLTGEPVRSEYRMPGTGSPVPAADAV
                     LACPLRLTA"
     gene            complement(1805..2152)
                     /locus_tag="VFD73_04415"
     CDS             complement(1805..2152)
                     /locus_tag="VFD73_04415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73264.1"
                     /translation="MTATARRGHGEDSVYRDAANGTWVGAISLGWRPDGSRIRRKVTG
                     RTKIKVREKLKKLQAEADAGLKTSASYTVAKAVADWAAHCRASHNVLYLVVSDAPTPE
                     GIPALVAACQVAG"
     gene            complement(2222..2294)
                     /locus_tag="VFD73_04420"
     tRNA            complement(2222..2294)
                     /locus_tag="VFD73_04420"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2259..2261),aa:Ala,seq:tgc)
BASE COUNT          426 a          804 c          734 g          379 t
ORIGIN      
        1 gggcaagaac ccccggagcc accatgatcg tccgggtaac cgcgacaaca gcggtactga
       61 tggcagactg aacgcgcaac ggaggtcctc ggcagcgggc tgatcttggt cgacacccgt
      121 cttaccggac ctccgttgcc atgtccgcac atccacgccg atcccaggca aactgcttga
      181 atgcagaccg caacccttaa ctccccggca ttgcgtctag gtcgccctgc gggcgtcgtt
      241 gcgcgatcgg ctgcgtcgaa cctagacccg acgtccactc gtatggggat cggcgcctat
      301 gcggaagatg gcctggaatg atcggcgcaa tggagccagg ccagcatgtc agatgcggcc
      361 agctgcgccg cgcgctggtg gtaatgatcg atctctgcat cggtcagaat ctcttgcccg
      421 gcgccagatc tgccccggcg gaagaacgcg gcggtgcttt tgaggaggcc gccagcggtg
      481 acgaactggt cggcgcgggc gcgcatctgc tcgaaggtgg ccgcctggac aaggctgggc
      541 cacgcctgct ccgggaccgt tgcgcccagc cgcctcgcca gccgccgcat ttcgccgtcc
      601 aggtcgcgca ggagatcgtc gtagtgcacc agcagcacgt tcagctgact ctgtctgtcc
      661 cacgcatctg acaggtgcca catcacgcca ggcagcgagt ccatcttctc gcgggggtta
      721 gcgtcatcgc cgatccactc aagcagccac tgccgcagct gcgggcgcgc cggtggcggc
      781 gcggctggct cggactggcc agtcagctgg cgcacccggg accggtcgat gttattaccc
      841 tggtggtaca gcgaaaccgc catgtcgagg ggatgacggg cggtgacgat gtaggtggcg
      901 cgtgggtcga gcgggatccc atccagcgga gtatgggtct tgacgaaccg ccgatgctgc
      961 tggcgatcca gccgggcata gatctcctcg cgcggggtaa tgaggtgatc cagccacggg
     1021 gaaagccgcc ccaacggttc tggcagctcc ggagtctgga agatcagcag cgcgcagatc
     1081 atctgcaccc acgtggtgcc ggtcttggac ctggtgctta tcacaatgtc gccctcgcgg
     1141 aacgggaaac cgatccagcg agcactgtcc tcctcatcag agcgatagcg aactggcagc
     1201 gaaatcaccc ggcgagcata accagcaacg aaccagaccg gggtcgcagg caaggccccg
     1261 tgccagatgc aacacgaaac agcagtcact cacggccgct cacaagtgac ccagatgcag
     1321 ttcaccgccg cctcctggcc tgcgcgatcc gctgcccggc cgcctcgcgg tcggacggcg
     1381 tcatgaggta ccagcccgaa ccgggagcgc gtcgacgacc tcgctccacg gcggcagcct
     1441 gcactcatac ggcgcgtccg gatcgaacag cacccgaaca cccataccac gcaacgtctc
     1501 caagctcgcg gcgaacgccg gataactggc gagctggggc ttgcagtgcg gcaccaccac
     1561 ggccgggacg ccgtaaccgg ccatctcgca cagcaacccg accgcgaatt gtctgcgtga
     1621 ccgtgggcga acttgttcac gctgttaaac gcaaagggca cgccagcacg gcgtccgcag
     1681 cggggaccgg gctgccggtg cccggcatcc ggtactcaga ccgcaccggc tcgccggtca
     1741 gctgttccaa ctccgccgca tcgatgaacc tgatgccggt cggcgtgcag aagaccatga
     1801 cccgctaccc tgcgacctgg cacgcggcga ccagcgcggg tatgccctcg ggcgtcgggg
     1861 cgtcgctgac caccaggtac agcacgttgt gagaagcgcg gcagtgtgcc gcccagtcag
     1921 ccaccgcctt ggccaccgtg taggaagccg acgtcttcag cccagcgtct gcttccgcct
     1981 ggagcttctt cagcttctcc cggaccttga tcttggtccg gccggtcacc ttccgccgga
     2041 tccgcgaacc gtccggacgc cagccgagcg agatcgcacc cacccaggtg ccgttcgccg
     2101 catcccggta gaccgaatcc tcaccgtgcc cacggcgcgc agtagccgtc ataggccaca
     2161 tgggacgccg agtttggctc ggcttcgagg ccttcaagat ctcattttgg cctatgacct
     2221 gtggagctaa ggggactcga acccctggcc ttctggatgc aaaccagacg ctcttccagc
     2281 tgagctatag ccccggatgc cttccgacca gggtacccgg tgcgtactgg ttagggcgca
     2341 tcc
//
LOCUS       DASRPQ010000377         1251 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_982334, whole genome shotgun sequence.
ACCESSION   DASRPQ010000377 DASRPQ010000000
VERSION     DASRPQ010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_982334"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..951)
                     /locus_tag="VFD73_04425"
     CDS             complement(<1..951)
                     /locus_tag="VFD73_04425"
                     /inference="COORDINATES: protein motif:HMM:NF040570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI73265.1"
                     /translation="MRTAYRCRAYPDEQQQAVLRRTFGCVRVVWNRTLATRRARYFAE
                     GKAISYAETDRALTEMKRDPDLAFLTEVSSVPLQQTLRHQHQAFTAFYEKRARYPRFK
                     SRAGCQSAHYTRSAFSLRNGMLRLAKTSTPLRFTWTWPEVDLTALDPAMVIICREPDG
                     RWYVTFTIDTGSPEPLPETGHAVGIDLGVTVYAVTSNGDRITNPRHLDSKARKLARYQ
                     RRLARCQKGSALREKAKLKVARAHRKVRDARRDFLHRASARLVRSADTIVIEDLNVSG
                     LVRNRKLARAISDCGWAEFRRQLAYKCQRYGRQLVVIDRWF"
BASE COUNT          207 a          396 c          409 g          239 t
ORIGIN      
        1 aaaccagcgg tcaatgacga cgagttgccg tccgtaccgt tgacacttgt atgccagttg
       61 gcggcggaac tcggcccaac cgcagtccga gatggcgcgg gccagtttcc ggttacggac
      121 caggccggag acgttcaggt cctcgatcac gattgtgtcg gcagagcgga caagcctggc
      181 gctagcccga tgcaagaagt cgcgccgcgc gtcgcggacc ttacgatggg cgcgggcgac
      241 cttgagttta gccttttccc ggagcgcgga acccttctgg cagcgggcca ggcgccgctg
      301 gtatcgagcc agtttgcggg ccttgctgtc caggtgccgg gggttggtga tcctgtcgcc
      361 gttgctggtc acggcgtaaa ccgtcacgcc gagatcaatg ccgacggcgt gcccggtctc
      421 tggcagtggt tcggggctcc cggtatcgat ggtgaaggtc acgtaccagc ggccgtccgg
      481 ctcccggcag ataatgacca tcgccgggtc cagcgcagtc aggtccacct ccggccaagt
      541 ccaggtgaac cgcaacggcg tggacgtctt ggccagcctc agcatcccgt tgcgcaggga
      601 gaacgccgac cgggtatagt gcgcggactg gcacccagcg cgggatttga accgggggta
      661 gcgagcgcgt ttctcataaa acgcggtgaa cgcctgatgc tggtgccgca gcgtctgctg
      721 cagcggcacg ctggacacct ccgtcaagaa cgccaagtcc gggtcgcgct tcatctcggt
      781 cagcgcccgg tcggtttctg catacgagat ggccttgccc tcggcaaagt agcgggcgcg
      841 ccgcgtcgcc agggtccggt tccacacgac gcggacgcag ccgaacgtgc ggcgcaacac
      901 tgcctgctgt tgctcatcgg gataggcccg gcacctgtac gctgtccgca tatgcttact
      961 gtcgcacact ttttcgttaa agctacacag gcgcgccgta tatgtttcgg ttctctatgc
     1021 tggcctgcct cgtgggagta cctgcatgaa ggctgtggcc tccttcggag gtcatggtga
     1081 ccacccctcg atctgacgca gctgaaaccc agaccgttcg ggatgatctg cttcctggcc
     1141 ttcgcggctg gcagaaggat gcctatcacg agtacttccg gttgccgaga cgcgacttcc
     1201 tgctcgtcgc cacgcccggc gcgggcaaga cggcctacgc gctgacggtg g
//
LOCUS       DASRPQ010000378         2500 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3807119, whole genome shotgun sequence.
ACCESSION   DASRPQ010000378 DASRPQ010000000
VERSION     DASRPQ010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2500)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2500)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2500
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3807119"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..196
                     /locus_tag="VFD73_04430"
     CDS             <1..196
                     /locus_tag="VFD73_04430"
                     /inference="COORDINATES: protein motif:HMM:NF014012.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit E"
                     /protein_id="HZI73266.1"
                     /translation="KWGVALFAYLVSLTPGSTCLHVADDRRTLYVHFLDAPDPEARAA
                     GIKALFERRIIQLEGPETSG"
     gene            193..474
                     /locus_tag="VFD73_04435"
     CDS             193..474
                     /locus_tag="VFD73_04435"
                     /inference="COORDINATES: protein motif:HMM:NF015993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015075 - monoatomic ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation/H+ antiporter complex subunit
                     F"
                     /protein_id="HZI73267.1"
                     /translation="MTMLDLATVAKVLIAALALPLALAAYRMIKGPGYADRFVALDML
                     TAVVVSLAALTAVATGRGAFLDIGLGVALINFASTCAFATFLERRRNPQ"
     gene            471..854
                     /gene="mnhG"
                     /locus_tag="VFD73_04440"
     CDS             471..854
                     /gene="mnhG"
                     /locus_tag="VFD73_04440"
                     /inference="COORDINATES: protein motif:HMM:TIGR01300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0098662 - inorganic cation transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation/H(+) antiporter subunit G"
                     /protein_id="HZI73268.1"
                     /translation="MTRVMVGTMLLVLGVVFITLAGLGVARLPDVFQRMHAATKAGGI
                     GTSLLVLGVLVAGDIVQPISGVLTIGFMLLTLSVASQLLARAAYISGAPLQGLDRGDP
                     LAGILGRASEPEDEGADFSSTYEEG"
     gene            854..1327
                     /locus_tag="VFD73_04445"
     CDS             854..1327
                     /locus_tag="VFD73_04445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73269.1"
                     /translation="MRAQLSLVTVIVLAAVACGGRRATELRTSEYPVGTRWNASLAAP
                     AAMVGVVQVGGRAWMAPGADSGETRASIAIRNAIPGARYPWHVHRGQCGSPGNVLGPA
                     DAYGVLQVGKNGQASRSVTLPLPMPKDGAYMVDVHASASNPGTIVSCGNLAPPVR"
     gene            complement(1376..2347)
                     /locus_tag="VFD73_04450"
     CDS             complement(1376..2347)
                     /locus_tag="VFD73_04450"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HZI73270.1"
                     /translation="MTSRLLSQRLESLRGFHSILVPVDQSPLAEQAISVALAIAERAR
                     SKIKLVHVHRELRPLFELEPSQDYVELRLAMRKSGREYLRTLTRHLQQRMGRAASSVM
                     LTGPVAPTLATYVKDLRADLVVMTSHGYGGLRRIWLGSVADELVRTVEVPVLLVRPAE
                     NENPDPASFRRIMVPLDGSPLAEEILAPALLLGRLWSAELNLLQIVHPLPYAAGAVPK
                     PLRSTAHYNPLVSRELEIARAYLEGIAGSLRDQQVTASSRAVVGASVAETLVDSAHQE
                     GAGLIALATHGRSGVRRLVLGSVADKLLRATELPVLVYRPRRRRKRS"
BASE COUNT          439 a          788 c          829 g          444 t
ORIGIN      
        1 aaagtggggc gtggcgctct tcgcctatct ggtgtcgctc acccccggat ccacctgcct
       61 gcacgtcgcc gacgatcgcc gcaccctgta cgtccacttc ctcgacgcgc cggatccgga
      121 ggcacgggcc gccgggatca aggcgctctt cgagcggcgg atcattcaac tggaaggacc
      181 ggagacgtct ggatgaccat gctcgatctc gccacggtgg cgaaggtcct gatcgcggca
      241 ctggccctac cgctcgccct cgccgcgtac cgtatgatca agggtccggg atatgccgac
      301 cgcttcgtcg cgctggacat gctcaccgcc gtcgtggtct cgctcgccgc cctaactgcg
      361 gtggcaaccg ggcggggcgc gttcctcgac atcggcctcg gcgtcgcact gatcaacttc
      421 gcgtccacct gcgcgttcgc aaccttcctg gaacgtaggc ggaacccgca gtgacccggg
      481 tgatggtggg caccatgcta ttggtcctgg gggtggtctt catcaccctg gccgggctcg
      541 gtgttgcgcg gctgccggac gtcttccagc ggatgcatgc ggcgaccaag gcgggcggca
      601 ttgggaccag cctcctcgtt ctcggagtgc tggtcgccgg ggatattgtg cagccgatca
      661 gcggcgtcct caccatcggg ttcatgctgc tgaccttgtc ggtggcatct cagctgctgg
      721 cgcgagcagc ctacatctcg ggcgcgccgc tgcaagggtt ggatcggggc gatccgctgg
      781 cggggatact gggccgggcg tccgagccag aagacgaagg agcagatttc agttctacct
      841 acgaggaggg ataatgaggg cacagctgtc actggtcacg gtcatagtgc tggctgcggt
      901 ggcctgtgga ggcaggcggg caactgaact gcgaacgtcc gaatacccgg tggggacccg
      961 atggaacgca agcctggctg ctccggcagc aatggtcggc gtcgtgcaag tgggcgggcg
     1021 cgcatggatg gcaccagggg cggactctgg agagactcgc gcctcgatcg ccatccggaa
     1081 cgccataccg ggtgcacgtt acccgtggca cgtgcaccgg gggcagtgcg ggtccccagg
     1141 taatgtgctc ggtccggcgg atgcctacgg agttctccaa gtgggaaaaa acggccaggc
     1201 ttcccgttcg gtgacgctac cgctgcccat gcccaaagac ggggcttaca tggtcgacgt
     1261 ccacgcctcg gccagcaatc ctggcaccat tgtctcgtgc ggcaatctcg cgccaccggt
     1321 ccgataatcc ttggacgtcc actcgctgcg gcgctggatg cgacgggaga agaagtcagc
     1381 tgcgtttccg gcgccggcgg ggacgataga ccaggaccgg aagttcggtc gcccggagca
     1441 gcttgtcggc tacgctgccg agtaccaatc gacgaacgcc actccgaccg tgagttgcca
     1501 gcgcgatcag accagcgcct tcctgatgcg cggagtcaac cagagtctcc gccacgctcg
     1561 ccccgacaac cgccctcgac gacgcggtga cctgctgatc ccgcagactc ccggcgatgc
     1621 cctcgaggta ggctcgagcg atctccagct ctcgggatac cagtgggttg tagtgagcgg
     1681 tgctacgaag aggttttgga acagcacccg cggcgtaggg aagcgggtgc acgatctgta
     1741 gcagattgag ctcggcgctc cagagccgcc caagtaatag ggccggtgcc aggatctctt
     1801 ctgcgagagg cgacccgtcg aggggtacca tgatccggcg aaagctggct gggtcgggat
     1861 tctcattttc agcgggccgc accagaagaa ccggaacctc aaccgtccga accagctcat
     1921 cggcaacgct cccgagccag atacggcgga gccctccgta cccatgggac gtcatcacca
     1981 cgaggtcagc ccgcaggtcc ttgacgtagg tggcaagagt cggagccacc ggtccggtca
     2041 gcattacgct ggaggccgca cgccccattc gctgttgcag atgccgggtg agagttctga
     2101 gatactcacg cccggatttc cgcattgcga gccggagctc gacgtaatcc tgactgggct
     2161 cgagttcaaa cagcggccgg agctctcgat ggacgtgcac cagtttgatt ttgctccggg
     2221 cgcgttcggc aatcgcgagc gcgaccgata ttgcctgctc ggccaggggg gactggtcta
     2281 ccgggacgag gatggaatga aatcctctaa gggattcaag tcgctgggag agcagacgag
     2341 aggtcactga aggccccgct taccctcgaa gatgccacgc cttcggctgc acgaatgctc
     2401 tgatgccggc gaccgataag gtggtgccca ggccggagtg ctttcgtccc gaccagggca
     2461 gtctggggct cacccggtcg cagcagttcc agtaggcact
//
LOCUS       DASRPQ010000379         2344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4430643, whole genome shotgun sequence.
ACCESSION   DASRPQ010000379 DASRPQ010000000
VERSION     DASRPQ010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4430643"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1182
                     /locus_tag="VFD73_04455"
     CDS             <1..1182
                     /locus_tag="VFD73_04455"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI73271.1"
                     /translation="GVLDADRLRFRQVVLNLLSNAVKFTPDGGRVDVRASIRDQDLVV
                     EVADTGPGVAAEDRLRIFDSFQQGARLPGQAEGTGLGLTLSKRILELHGGRIWVESEA
                     GKGSTFGFALPAGSGEPALTSVPQVGLDSGLPTELAPGPGPTVVVVEDDRRSFDLLRA
                     YLEAAGARVVSARDGEEGLDTVRQLSPAGVILDILLPGIDGWEVLARLKADPRTTAIP
                     VIVVSMLDERGRGFALGAAEYLVKPVGKEQLLAALYRAAAMPERKHTVVAIDDDPLAI
                     ELVRASLEPEGWTVLGAATGQEGLALIRERQPSAVLLDLLMPGMDGFEVVEALRSDPD
                     TKSVPVVILTSKSMTQQDKERLQGRITYVARKTEFDLSGLAGLLRWASTSRQSPASES
                     G"
     gene            1179..1565
                     /locus_tag="VFD73_04460"
     CDS             1179..1565
                     /locus_tag="VFD73_04460"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI73272.1"
                     /translation="MTYVILVVEDNERNLKLLRDVLEYAGYDVRVARTAEDGITSAVS
                     EPPDLVLMDLQLPGINGMEALRRLRESSRTADIPVVAVTAQAMKQDRERALDAGFNGY
                     VEKPISVRAFPDQVRRFLSGGEVGTE"
     gene            1562..>2344
                     /locus_tag="VFD73_04465"
     CDS             1562..>2344
                     /locus_tag="VFD73_04465"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI73273.1"
                     /translation="MTSDPLVLVVDDLAQNVRLLEAVLSPKGFRVAKASSGVEALDVL
                     SKEHPDVVLLDILMPGMDGYEVCRRIREDPGTAFLPVIMITASGEQEKIRAIESGADD
                     FVSKPFDQAELLARVRSLLRVKRYHDTIEHQAAELARWNRELEQRVQDQVEQLERVGR
                     LRRFLPAQLADLIISSGDESFLNPHRREITVVCCDLRGFTPFAETAEPEDVWEILGEY
                     HGALGDLIARFEGTLEHFAGDGLVVFFNDPLPCDDAPLRSVRM"
BASE COUNT          404 a          726 c          799 g          415 t
ORIGIN      
        1 ggcgtgcttg acgccgatcg cctacgcttc aggcaagtcg tgctgaatct gctgtccaac
       61 gcggtgaagt tcacccccga cggcggacgc gtagacgtcc gcgcctcaat acgtgatcag
      121 gacctcgtcg tggaggtagc cgacacggga ccgggcgtgg cggccgagga ccgcctgcgc
      181 atcttcgact ccttccagca aggcgcccgg cttcccgggc aggccgaggg caccgggctc
      241 gggctcaccc tgtccaagcg gatccttgag ctgcacgggg gcaggatctg ggtcgaaagt
      301 gaagctggga agggcagcac cttcgggttc gcgctgccgg ccggatccgg ggaaccggcg
      361 ttgacgtcag tcccgcaggt cggcctggat tcaggtctcc ccaccgagtt ggccccgggc
      421 cccgggccca ctgtcgtcgt cgtggaagac gaccggcggt ccttcgatct gctgcgggct
      481 tatctcgagg cggcgggtgc ccgcgtcgtc agcgcccgag acggcgaaga aggcctggat
      541 acggtgcgcc agctgagtcc cgcaggcgtc atcctcgaca tccttctgcc gggaatcgac
      601 ggctgggagg ttctcgcccg gctcaaggca gacccacgga cgacagcgat accggtgatc
      661 gtggtgtcga tgctcgatga gcgtggccgc ggtttcgcgc tgggcgccgc cgaatacctc
      721 gtcaagccgg tgggcaagga gcagctgctg gccgccctct atcgcgcagc ggcaatgcct
      781 gagcggaagc acacggtggt ggcaattgac gacgatcctc ttgccataga gctggtccgg
      841 gcaagtctcg agcccgaggg atggaccgtg ctgggcgcag ccacgggcca ggaagggctg
      901 gcactgatcc gggaacggca accctccgcc gttctgctgg accttctcat gcccggtatg
      961 gatggcttcg aagtcgtgga ggctctgcga tcagaccccg acacgaaatc cgtccccgtg
     1021 gtcatcctca cgtccaagtc aatgacccag caggacaagg agcggctgca ggggcgaatc
     1081 acgtatgtag cgcgcaagac ggagttcgat ctgtcgggcc tcgcgggact gctccgctgg
     1141 gcgagcacta gtcgccagtc cccggcatcg gagtcgggat gacctacgtg atcctagtcg
     1201 tggaggacaa cgagcggaat ctcaagctgc tgcgagacgt gcttgagtac gcaggctacg
     1261 acgtgcgggt ggcccggacg gccgaggacg gcatcacctc ggcggtcagc gagcctcccg
     1321 atctcgttct catggatctc caactgcccg gtatcaacgg catggaggct cttcgccggc
     1381 tgcgcgagag ctcgcggaca gcggacatac ccgtggtcgc ggtaacggcc caggcaatga
     1441 agcaggatcg ggaacgggcc ttggatgccg gtttcaacgg gtacgtagag aagccgatca
     1501 gtgtccgtgc attccccgat caggttcgca gattcctctc aggtggggag gtggggactg
     1561 agtgacatca gacccgctcg tactcgtcgt ggatgatctg gcgcagaacg tccgcctgct
     1621 tgaggcggtg ctgtcgccaa agggattccg ggtggctaag gcgtcctccg gagtggaagc
     1681 tctggacgtg ctgagcaagg agcacccaga tgtcgttctg ctggacatct tgatgcccgg
     1741 aatggatggg tatgaggtct gccgccgaat ccgagaagat ccagggacgg ctttcctgcc
     1801 ggtgatcatg atcactgcga gcggagaaca ggagaagatc cgcgccatcg agtccggcgc
     1861 cgacgacttc gtcagcaagc ctttcgacca ggccgagttg ctggcccggg tgcgctcact
     1921 gctccgggtc aagcggtacc acgacacgat cgaacatcag gccgccgagc tggctcgctg
     1981 gaatcgtgag ctcgagcagc gcgtccagga ccaggtcgag cagctggaac gcgtgggtcg
     2041 gctgcgccgg ttccttccgg cacagctggc cgacctcatc atcagctcgg gcgatgagtc
     2101 tttcctcaac ccgcaccgcc gcgagatcac ggtggtgtgc tgtgacctgc gcggcttcac
     2161 ccccttcgcc gagacggctg aacccgagga tgtctgggag atcctcgggg agtatcacgg
     2221 cgccctgggc gacctcatag cccgcttcga ggggactttg gagcatttcg ccggtgatgg
     2281 actcgtggtc tttttcaacg atcccctccc gtgcgacgac gcgccgttgc ggtctgtccg
     2341 gatg
//
LOCUS       DASRPQ010000380         2622 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_359108, whole genome shotgun sequence.
ACCESSION   DASRPQ010000380 DASRPQ010000000
VERSION     DASRPQ010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2622
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_359108"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(50..826)
                     /locus_tag="VFD73_04470"
     CDS             complement(50..826)
                     /locus_tag="VFD73_04470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HZI73274.1"
                     /translation="MVYDARHALEHPEVAGWALGSLDPDDMAAFEQHLQTCDQCRGEV
                     AEFTPVAKSLALSAPAVEPPADLELKVVAAVQYAAMADSAAASCAVPEPPAATTHADV
                     KPGTATKARRWWHLHWTNPLLAALAAAAVTAAAFLGGTLFESAPALAATFTLRPQPGQ
                     AGSATAVARSVTGGFQIKMDLKHLAKLGPGQFYECVYLGHGDGELVSAGTFLTSNGPV
                     TMQSAANPGEFRIIQIRREQPGVDVQDAPVVLTGVADTRS"
     gene            complement(816..1388)
                     /locus_tag="VFD73_04475"
     CDS             complement(816..1388)
                     /locus_tag="VFD73_04475"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZI73275.1"
                     /translation="MTETAGSAAVAAEEAGLVARMASGDVGAPVAELYRRYGRRLYRF
                     GVNHLGNEGLAEEMVQETFVRLWRTAGRFDADKASVGTYLYVLARSAAADIYKRPSSR
                     PFLSDTTIDEQAMADSVDQILDSMIVREALESLSPEQAEVIRLGQENGLTQSQIAERL
                     NLPLGTVKTRSFHGMRALRSALIERGFHGV"
     gene            2003..>2622
                     /locus_tag="VFD73_04480"
     CDS             2003..>2622
                     /locus_tag="VFD73_04480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73276.1"
                     /translation="MGVVMLASLLLAGMVAAPLSFTGLVIPVKRHACATAGQWPAVRR
                     LALAMAATAAVAVAVAVSLGLVGISRHDRDAGIACVVLANLAWLPVTGRWMARARLCW
                     ASSIFLVTVYLTAALGWTLTSGSGAASMIGGMLLWVFELFAAVLSCAYLWEICEALGT
                     QHWRRRPAPDAPAAEDSDLPMISLHVPAHNEPPGMVIDTLRSLVRL"
BASE COUNT          441 a          829 c          870 g          482 t
ORIGIN      
        1 ttccggccca tgaacccagt atgctcctcc tcgcccctaa cagcgggcgc taggagcgag
       61 tatcagcgac tccggtcaag acgaccggag cgtcttggac gtcgacgccg ggctgctctc
      121 gcctgatctg aatgatcctg aactcgcccg ggttggccgc gctttgcatg gtcacgggcc
      181 cgttgctggt caagaacgtc cccgccgaca ccagttcgcc atcgccgtgg ccgaggtaca
      241 cgcactcgta gaactggccg gggccgagct tggcgaggtg cttcaggtcc atcttgatct
      301 ggaagccgcc cgtgacgctg cgggcgacgg ccgtggccga gccggcttgt ccgggctgcg
      361 ggcgcagggt gaaggtggcg gccagcgctg gtgctgactc gaacagcgtg ccgccgagaa
      421 aggcagccgc ggtcaccgca gcggcggcca gggcggccag cagggggttg gtccagtgca
      481 ggtgccacca gcggcgcgcc ttggttgccg tgcccggctt gacgtcagca tgggttgtcg
      541 ctgcaggcgg ttcgggaacc gcgcaggagg cggcggcgct gtcggccatg gcggcgtact
      601 ggacggcggc cacgactttg agctcgaggt cggcaggcgg ttcgacggct ggcgccgaca
      661 gggcgaggct cttggctacc ggggtgaatt cggcgacttc gccccggcac tggtcgcacg
      721 tctgcaggtg ctgctcgaag gcagccatgt cgtcggggtc cagggatccg agggcccatc
      781 cggcgacttc aggatgctcc agggcatgcc gcgcgtcata caccatggaa acctcgctcg
      841 atcagagcgc tgcggagtgc tcgcattcca tggaaggacc gggtcttgac cgtaccgagg
      901 gggagattga gccgctcggc gatctggctc tgggtgagac cgttctcctg gcctaggcgg
      961 atcacctcgg cctgttctgg gctgagactc tccaatgcct cccgcacgat catggagtcg
     1021 agaatctggt cgacgctatc ggccatggcc tgctcgtcaa tagtggtgtc ggaaaggaac
     1081 ggccgggacg acgggcgctt gtagatgtcg gcggcggcgc tgcgagccag gacgtacagg
     1141 taggtgccga cgctggcctt atcagcgtcg aagcgccccg ccgtccgcca tagcctcacg
     1201 aaagtctcct gcaccatttc ctcggctagg ccttcgttgc cgagatggtt caccccgaag
     1261 cggtagagcc gtctgccgta ccggcggtac agctccgcta ccggggctcc gacatcacca
     1321 gatgccatcc gggcaacaag accagcctcc tccgctgcga ccgcggctga gcccgcagtc
     1381 tcggtcaccg acactgccag ttccccccag caggtttata cgaggtcttt cggccgaacg
     1441 gttcacgctg gtctcgattt tcctaaccga aacaagctgg ctcaaaccac cctgggacgg
     1501 atcacgcata aaacgctcgc ggaccagcgc ttctgtccgc tgcagcttca tttgtatacg
     1561 acaaacaacc cgggtcttgt catcgtctca tcctgggtgc gcgcaggcac ctcagattgt
     1621 ttaaaatttt cttaccgagc agtgaaccac tcaagctaag gccgccgtat atccgaccac
     1681 aaccccgcag ggggaggcat gggagcgagc ggaggacgac taaattgggc gccttcaagg
     1741 aggctttgac gactggaaaa gccgtcaacg agccatcgaa cggaaacagc ggtagcggcc
     1801 aagtaggaga gccgtaggcg ttctccggag ccagttgtac ccgtggccgg ttatgaacga
     1861 aatggacctc gcacagggtc gagcctgata agccagcttc agggccaggc tagaaatgcg
     1921 ccgatcaacc gtgcggaccc ttcccaggcc ggctctcaga aattcctctt cttcgcgtct
     1981 tcgacgtcct atctaattag cagtgggggt agtaatgctt gcgagtttgc tattggccgg
     2041 catggtggcg gcgccgctga gctttaccgg cctggtaata ccggttaagc ggcacgcctg
     2101 tgctacggcc ggtcagtggc cagccgtccg ccggctggcg ctagcgatgg ccgccacggc
     2161 ggcggtcgcg gtggcggtgg cggtgtctct gggactggtc gggatttcca ggcacgaccg
     2221 ggacgcgggc atcgcctgcg tggtgctcgc gaacctggcc tggctccctg tgaccggccg
     2281 ctggatggcc cgggcccggc tgtgctgggc gtcaagcatc ttccttgtca ccgtgtatct
     2341 gacggcagcg ctggggtgga ccctcaccag cggatcgggc gcggccagca tgatcggcgg
     2401 catgctgcta tgggtcttcg aactgttcgc cgccgtcctg tcgtgtgcct acctatggga
     2461 gatctgcgaa gcgctcggta cgcagcactg gcgcaggcgg ccagctcctg atgctccggc
     2521 cgccgaggac agtgacctgc cgatgatcag cctgcacgtc ccagcccata acgagccgcc
     2581 aggcatggtc atcgacacgc tgcgttccct ggtgcgcctc ga
//
LOCUS       DASRPQ010000381         1140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4430779, whole genome shotgun sequence.
ACCESSION   DASRPQ010000381 DASRPQ010000000
VERSION     DASRPQ010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1140
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4430779"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            39..299
                     /locus_tag="VFD73_04485"
     CDS             39..299
                     /locus_tag="VFD73_04485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73277.1"
                     /translation="MPQESRSQLRCRDGHFEMAEFEIKGQPDGFWMWVACEFDGHRGG
                     HWLAPDPTQPGRLTVTSEPYGWPSALDAYAARDRWTEQDDTP"
     gene            740..>1140
                     /locus_tag="VFD73_04490"
     CDS             740..>1140
                     /locus_tag="VFD73_04490"
                     /inference="COORDINATES: protein motif:HMM:NF017758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF892 family protein"
                     /protein_id="HZI73278.1"
                     /translation="MPMTNPSDLFLHELGDIYDEENRLLQILPALASEVDNQQVKQAF
                     QQHLQETQQQVKNIEQVFQMLGKQPKRETCAAIQGLKQEHDTFMKQEKPSPQITTMFD
                     LGAAAKTEHYEIASYEGLIEQCQLMGQQDCA"
BASE COUNT          225 a          383 c          330 g          202 t
ORIGIN      
        1 cctgaagcca gccaccacag aaaaggaggg tatcgtccat gccccaggaa tcgcgctcgc
       61 agctccgctg ccgtgacggc cacttcgaga tggccgagtt cgagatcaag ggccagcccg
      121 acggcttctg gatgtgggtc gcctgcgagt tcgacggcca ccgcggcggc cactggctcg
      181 cccccgatcc cactcagccc ggccgcctca ccgtcacctc cgagccatac ggctggccct
      241 ccgccttaga tgcctacgcc gcccgcgacc gctggaccga gcaggatgac accccatgaa
      301 agtataaacc atcgctaatg ccaacgcaca tatctattta tttgactttg cgctcgtctc
      361 cggctatact ctctccatca cggaggggcg cgagcggcta tcgcaacctt ccggatgcgc
      421 gacccgggct gttttccggg ttctcgcaca ggtggagctt ccatgccggc gggctgtttt
      481 ccgtcgccct ggcctgctga ttggccaggg gaagagtgaa gcgacgccgc accgataccg
      541 taggctgctt ctacgcggta ggctgttctc taccggacgg tgcttgaaat ctggggcggg
      601 tgtatcccgc ccccttttcg tgtgcggcgt ttgctgcccc tgatggcatg gatggtgcgg
      661 cattacctcc tctggcgccg tggatcatga gggtccacgg ccatgtagtg accccacaac
      721 gagaaggaga cgccgaccca tgcccatgac taacccatcc gatctcttcc tgcacgagct
      781 cggcgacatc tacgacgaag agaaccgcct cctccagatc ctgcccgcac tggcgtcgga
      841 agttgacaat cagcaggtga agcaggcctt ccagcaacac ctgcaggaga cccagcagca
      901 ggtcaagaac atcgagcagg ttttccagat gctcggcaag cagcccaagc gcgagacctg
      961 cgcggccatt cagggcctca agcaggaaca cgatacgttc atgaagcagg agaagccctc
     1021 gccccagatc accaccatgt tcgacctggg cgcggcggcc aagaccgagc actatgagat
     1081 cgcctcctac gaggggctga tcgagcagtg ccagctgatg ggccagcagg actgcgccca
//
LOCUS       DASRPQ010000382         1128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4430809, whole genome shotgun sequence.
ACCESSION   DASRPQ010000382 DASRPQ010000000
VERSION     DASRPQ010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4430809"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..136)
                     /locus_tag="VFD73_04495"
     tRNA            complement(63..136)
                     /locus_tag="VFD73_04495"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(100..102),aa:Lys,seq:ctt)
     gene            complement(155..225)
                     /locus_tag="VFD73_04500"
     tRNA            complement(155..225)
                     /locus_tag="VFD73_04500"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(191..193),aa:Gly,seq:tcc)
     gene            complement(229..301)
                     /locus_tag="VFD73_04505"
     tRNA            complement(229..301)
                     /locus_tag="VFD73_04505"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(266..268),aa:Phe,seq:gaa)
     gene            complement(310..381)
                     /locus_tag="VFD73_04510"
     tRNA            complement(310..381)
                     /locus_tag="VFD73_04510"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(346..348),aa:Pro,seq:tgg)
     gene            complement(560..631)
                     /locus_tag="VFD73_04515"
     tRNA            complement(560..631)
                     /locus_tag="VFD73_04515"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(598..600),aa:Trp,seq:cca)
BASE COUNT          221 a          353 c          341 g          213 t
ORIGIN      
        1 gaacgcgcaa gccgcgaggt ctgagctcgc gaggtatccc ggttcccgtc actcccgcat
       61 cgtgcgccac cagggacttg aaccccgaac cgtcagctta agaggctgct gctctgacca
      121 tttgagctag tggcgcgcac cgtgatttac ccagagcgga tggagagagt cgaactctca
      181 ttatcagtgt ggaagactga agtcctgccg ttgaacgaca tccgcatgcg gttccccgag
      241 gactcgaacc tcgtacctgc gctacttcac agcgccgctc ttcccggtga gctagagaac
      301 catcgatcgt cgggaagcag ggactcgaac cccgtccatc cggccccaaa ccggaggcgc
      361 taacccttac accacatccc gttgagtgga gatggccgga atcgaaccgg ctacggcagc
      421 gcttgcgggg cgcgcccgct ccttagctgt cacccccgcc ggcaggcctc ggccggtgct
      481 tgtcacacgg ctctggcctg ccgtttcatg gtgctcacac tatggacgtg tcaataacca
      541 agcctgtatt aaaggcatgc ggggacgtca ggagtcgaac ctgaatttcg ccggttttgg
      601 agaccagatg cctatccgct ggctcatccc caggtaaatg aaaaccgccc cccgggagat
      661 tctccctggg acggctgccg gtaagtgcct gctggacgct tacacggcaa ccacgccaca
      721 ccgattgctg aacagggcag catcgagtga cgagtccggg tgcatgtacc cggctcgttt
      781 cagcgcctgc cacgtcgtca tgaatccatg gtaagtcttc acatagaagg gagcaattgt
      841 attttcccgc ttattcctcg gcgggtgcgg aaggtccggt ggcggttcac gctcgaagcc
      901 ggccaggggc ccctacccgg cggttcggcc tggcgggcgg caccgactgt cgacaagctg
      961 tggataagtc ggtggataac tgcccggatc ctgtggacgc catgtggaca gcacgaaaac
     1021 tgcaagtgaa tggcccaggt gaacggaccc ggcaaggccc ccttcatctc atacatggag
     1081 ggggcctgcc tcgcagtgtg gtgcatccgg ttgcggcggc caggcagg
//
LOCUS       DASRPQ010000383         1596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4117408, whole genome shotgun sequence.
ACCESSION   DASRPQ010000383 DASRPQ010000000
VERSION     DASRPQ010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4117408"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..437)
                     /locus_tag="VFD73_04520"
     CDS             complement(<1..437)
                     /locus_tag="VFD73_04520"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HZI73279.1"
                     /translation="MPGQRETQATRREQILEAAYEVALRRGIDGLTVRAVAARARLSH
                     SLVLFHFKRKDELGLALLDRVLAGTLALAVPEEIRHIRKPRERLHALVRQELQRVAVE
                     PRRLRLLLEFWTRGGHNAVIRQKIGAGLDRYRTTFQDLIAEMP"
     gene            576..1061
                     /locus_tag="VFD73_04525"
     CDS             576..1061
                     /locus_tag="VFD73_04525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73280.1"
                     /translation="MYHPRLLLLAVSGLALMSCNPFRHDQAVQVSTKDENLNSRWHAT
                     LATPADLAGAVQMNGTASMAPATKSGNTTVSLDLANATPGGLHPWQLHRGQCGADAGV
                     VGSVASYPSAKVGRDGRATATANLPLTTPTAGSYFVIVQASAANNAMTVACGNLAPPT
                     L"
     gene            1132..1443
                     /locus_tag="VFD73_04530"
     CDS             1132..1443
                     /locus_tag="VFD73_04530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73281.1"
                     /translation="MRARLRTARRAVDRRATATRPRLRQRPARPADPGSPNLDEARER
                     ESLRQVFQELGTSYRRYRSQVGGPVAPGLRDAAYNFRAEPSLASLVTVAGFLDELKLL
                     D"
BASE COUNT          278 a          537 c          494 g          287 t
ORIGIN      
        1 tggggcatct ccgcaatgag gtcctggaat gtggttcggt atcgatccag tccggcaccg
       61 atcttctgcc gaatgacggc gttgtggcct ccgcgagtcc agaactccag cagcagccgg
      121 agccggcgag gctctacggc cacgcgctgc agctcctgcc gaaccagcgc atgcagtcgc
      181 tcgcgcggct tcctgatgtg ccgaatctct tcggggaccg cgagcgcgag ggtgcccgcc
      241 agcacccggt cgagcagggc caatcctagc tcgtccttcc gcttgaaatg gaacaggacc
      301 aggctgtgac tgagcctggc ccgggcggct acggcccgca ccgtgagacc atcgatgccg
      361 cgccgaaggg cgacctcata tgccgcctcc aggatctgct cccgtcgggt ggcttgagtt
      421 tctctctggc ctggcatgcg tccctccgtg gaagtcgcta ttgacctggt taatgaagac
      481 tagtatttat taaccgcttg gtcaatagcg ccgcctcttt cccgccgcgt tccgctcgaa
      541 ccaggcttcc tgcagcaccg ttcttctgga ggcatatgta ccatccccgg cttctcctgc
      601 tcgcggtctc tggcctggca ctgatgtcct gtaacccgtt ccggcatgat caggcggtcc
      661 aggtcagcac caaagacgag aacctgaact cccgctggca cgccacactg gccactccgg
      721 ccgatctcgc cggtgcggtg cagatgaacg gcaccgcgtc gatggctccg gcgaccaaga
      781 gcgggaatac tacggtgtca ctcgatctgg ccaacgccac accgggcggc ctccatccct
      841 ggcagcttca tcggggccaa tgtggtgccg acgctggtgt ggtcggctcg gtagcctcgt
      901 acccgagcgc caaggtggga cgcgatggcc gagccactgc gaccgcaaat ctgccgctca
      961 ccacaccaac ggcgggcagc tacttcgtga tcgtccaggc gtccgcggcc aataatgcga
     1021 tgaccgtcgc ctgcggcaat ctcgcccctc cgactctgta aggttgccat ggtccaccaa
     1081 tccgacgccg tggccgtgcc tgcattcgaa tccgaacctc tagccgaccg gatgcgtgcg
     1141 cggctccgca ctgcgcgccg cgccgtggac cggcgggcga cagccaccag accgcgcttg
     1201 aggcaacggc cagcgcgtcc ggcggatcct ggctcgccca atctggatga agcccgagag
     1261 cgggagtcgc tcaggcaagt gttccaggaa ttagggacct cctaccgccg ataccgcagc
     1321 caggtcggag gcccggtggc gccgggactg cgagacgccg cctacaactt ccgggcggag
     1381 cccagcctgg cttcgctggt cacggttgcc ggcttcctgg atgagctcaa gctgctggac
     1441 tgagacgagg attccaatgc agaagcggtt ggttactgcc cccgagcaaa gaaccatgac
     1501 cgaggagaac tggttggatc tcggcgccat ggcagaggtc gaactgacat ccgaggaccc
     1561 ggcctatcct atcgagggag cattgcttcc ggatgg
//
LOCUS       DASRPQ010000384         3245 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1931626, whole genome shotgun sequence.
ACCESSION   DASRPQ010000384 DASRPQ010000000
VERSION     DASRPQ010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3245
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1931626"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..783
                     /locus_tag="VFD73_04535"
     CDS             <1..783
                     /locus_tag="VFD73_04535"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HZI73282.1"
                     /translation="RSGDLVKLEALANVQEGVGPRELNHFDRVRSATLTASLAPGFTL
                     GEALDSLNRIAAEVLPKGSSTALSGESRELEESGSALYFAFLLALVVVFMVLASQFES
                     LVHPFTVLLAVPLAVTGALFTLKLAGSTLNVYSQIGMILLIGLVSKNSILLVEYINQL
                     KDRGMTALAAAQEAGRIRLRPILMTSVATVMGALPIALGLGAGSLSRRPLGYAIVGGL
                     VFSTLLTLYVVPAVYLIFDGLLERSRRRRTARTPVLASVEAD"
     gene            783..2084
                     /locus_tag="VFD73_04540"
     CDS             783..2084
                     /locus_tag="VFD73_04540"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HZI73283.1"
                     /translation="MLLLLFALQAAPIQKDAVAPADSIPRISLDEAIRRSAHLDPDYV
                     RAVGQIENAEWGRRAAMLAFFVPSVEFGLDETKYSQEFFNPANPANPTSTLVVGRASA
                     TYELFSLRKFAELSRTKAELASADAGELEQRFQAALETESSYYDVLVNQELGRVSDER
                     VVRAREGLAVARARVSSGAAVQTDSLQLVLELIQAQVEVLRQRNALRTAQLELARRVG
                     AAGPVDAVPLDTAPAPALPISLAEAVRIGLDQGPQYRAALANESSAEATLRSHRGDYL
                     PVLTLGGLHQRYDTQLFPGAANISSVTFSVSFPLWNNGQREIEVSQARVNRDVARTIR
                     EDLERAVRRDVSSAYDTYQTATAAVELARVGVTVARQNYRMQELRYRSGATTILDLLD
                     AQVSLAQAEAGLVQARYQTRLALARLEAILGRRLFSNKDVP"
     gene            2081..>3245
                     /locus_tag="VFD73_04545"
     CDS             2081..>3245
                     /locus_tag="VFD73_04545"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HZI73284.1"
                     /translation="MRQIPWTFLMVAALPACNKAASEGKGAGPGGAAGGGGPPAMLVE
                     AAAARSDTVIDAILATGQIEAVQSIDLKPEVEGRLIQILVREGALVRQGTPLFKIDDA
                     ELKAQVAEIQAERDLAKQSLTRTRDLLAQKASSQAELERAEATLRSDEAQLDRLEVRL
                     QRTLVRAPFGGVVGQRFVSLGDYVNTDTRLAALQTVSPQRASFQVPERYADQLKLGQQ
                     VSFRVAALPGREFTGKVDFVDPIVQLPARTITVKARVPNPRRELQSGMFIEARLATAV
                     RPNAVVIPEDAILPLQGSNFVWVVSSGKATKRQVELGVRTPGFVEVKDGVHRNEQVVV
                     GGQERLAEGAPVQIKLVDRRPLGGQEESATAARRDDSSDSTVSGGGDADQSPSA"
BASE COUNT          571 a         1016 c         1073 g          585 t
ORIGIN      
        1 cgcagcggtg acctggtcaa gctggaagcg ctggccaacg tgcaggaagg cgtgggcccg
       61 cgggagctga accatttcga tcgagtgcgc tccgccaccc tgaccgccag tttggcgccg
      121 ggtttcacct tgggagaagc gctcgactct ctgaaccgga ttgccgcgga ggtcctgccg
      181 aagggaagca gcaccgccct gtcgggggag tcgcgcgagc tggaagaaag cggatccgcc
      241 ctctacttcg cattcctgct cgccctcgtc gtggtgttca tggtgctcgc gagccagttc
      301 gaatcgctgg tgcatccatt taccgtgctg ctcgcggtgc ctctcgcggt aaccggggcg
      361 ctgttcaccc tcaagctcgc ggggtccacg ctgaacgtgt acagccagat cggcatgatc
      421 ctgctgatcg gactggtctc gaagaactcg attctgctgg ttgagtacat caaccagctg
      481 aaggatcggg ggatgacggc cctggcagcg gcccaggagg cgggccgcat ccggctgcgt
      541 cccatcctga tgacatcggt tgccaccgtc atgggggcgc tgcccatcgc gcttgggctc
      601 ggcgcaggat cgctcagccg ccgtccattg ggttatgcga ttgtcggagg cctagtgttt
      661 tccactctgc tcaccctcta cgtcgtgccg gcggtctacc tgatcttcga tggactgctg
      721 gagaggtccc ggcgccgcag aaccgccagg acaccggtcc ttgcatcggt ggaggcagac
      781 tgatgctgct actgctcttt gccttgcagg ccgcgccgat acagaaagac gcggttgccc
      841 cagccgattc cattcctcgc atcagcctgg acgaggccat acgtcgctcg gcgcacctgg
      901 acccggacta cgtgcgggcc gtagggcaga tcgagaacgc agagtgggga cggcgggcgg
      961 caatgctggc gttcttcgtg ccatcggtgg agttcggcct ggacgagacc aagtactccc
     1021 aggagttctt caatccggcc aacccggcca acccaaccag caccctggtc gtcggtcggg
     1081 ccagcgcgac ctacgagctg ttcagccttc gcaagttcgc cgagctctcg cgcaccaagg
     1141 ccgagcttgc cagcgccgac gccggtgagc tggagcaacg atttcaggcg gcgctggaga
     1201 ccgagtcgag ctattacgac gtgctcgtga atcaagagct gggccgcgtg tccgacgaac
     1261 gcgtcgttcg ggcccgcgaa gggctggctg tagcccgagc gcgggtgagc tcgggagcgg
     1321 cggtgcaaac cgactcactc cagttggtgt tggagctcat tcaggcgcag gtcgaggtgc
     1381 tgcgccagcg aaacgctctc cgcactgctc aactcgagct tgctcgccgg gtgggggccg
     1441 cgggaccggt cgacgccgtg ccgttggata ctgctccggc tccggcgctt cctatctcac
     1501 tggcggaagc cgtgagaatc ggcctggacc agggaccgca gtatcgggct gcgttggcca
     1561 acgagagctc ggccgaggcg actctgcgct cccaccgcgg cgattatctc cccgtgctca
     1621 ctctcggcgg actgcatcaa cggtacgaca cgcagctgtt tcccggtgcg gcgaacatca
     1681 gctccgtcac gttcagcgtc tccttccctc tctggaacaa tggccagcga gagatcgaag
     1741 tcagccaggc tcgggtcaac cgggatgtgg cacggaccat acgcgaagac ctggaacgcg
     1801 ccgtacgccg ggatgtgtcc agcgcgtacg acacctacca gaccgctact gccgcggtgg
     1861 agctcgcgcg agtgggcgtg acggttgcca ggcagaatta tcgaatgcag gagctgcgct
     1921 accgctccgg ggcaacgacc attctcgatc tgctcgatgc ccaggtaagc ctggcgcaag
     1981 cggaagctgg gttggttcag gctcgctatc agacccgcct ggccctggcc cggctggagg
     2041 cgattcttgg ccggagactt ttctcgaaca aggatgttcc gtgagacaga ttccgtggac
     2101 ttttctgatg gtcgccgcat tgccggcctg taataaggcc gcgtccgagg gcaaaggcgc
     2161 gggccctgga ggagctgccg gcgggggcgg tcccccggcc atgctggtcg aagcggcggc
     2221 ggcccggtcg gataccgtga tcgacgctat cctggccacc ggtcagatcg aggcggttca
     2281 atcgatcgat ctcaagcccg aggtcgaggg ccggctgata cagatcctgg tccgcgaagg
     2341 tgccctggtc cgccagggaa cgccgctgtt caagatcgac gacgccgagc tgaaagcgca
     2401 ggtcgccgag attcaggcgg agcgagacct ggcgaaacaa tccctcaccc ggacccgaga
     2461 tttattggca cagaaggctt cctcccaggc agagttggaa cgggccgaag cgacgctgcg
     2521 aagcgacgaa gctcagctgg accgtctgga ggttcgcctg cagcgaaccc tggtccgggc
     2581 tccgtttgga ggcgtggtcg ggcagcggtt cgtgagcctg ggtgattacg tcaacaccga
     2641 tacccgtctt gccgcgctcc agaccgtgtc gccccagcgc gcgtcgttcc aggtacccga
     2701 acgctacgcc gatcagctga agctgggaca gcaggtgagc ttccgggtgg ccgcacttcc
     2761 ggggagagag tttaccggaa aggtcgactt cgttgatccc atcgtgcagc ttcccgctcg
     2821 caccatcacc gtcaaggcac gagttcccaa tccgcgccgc gaactgcaat ccggaatgtt
     2881 catcgaagca aggcttgcga cggcggttcg ccccaatgcc gtcgtgattc ccgaggatgc
     2941 cattctcccc ttgcaagggt ccaacttcgt ctgggtagtc agcagcggca aagccaccaa
     3001 acggcaagtg gagttgggcg tgcgtactcc cggatttgtg gaggtaaagg acggcgtgca
     3061 ccgaaacgag caggtcgttg ttggaggaca ggagcgcctt gccgagggcg ctccggtgca
     3121 gatcaagctg gttgaccgcc ggcctctggg tggacaggaa gaaagcgcaa ccgcagctcg
     3181 tcgggatgac agcagcgatt ctaccgtcag tggcggtggt gatgccgacc agtcgccctc
     3241 ggcca
//
LOCUS       DASRPQ010000385         1146 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1610743, whole genome shotgun sequence.
ACCESSION   DASRPQ010000385 DASRPQ010000000
VERSION     DASRPQ010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1610743"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..851)
                     /locus_tag="VFD73_04550"
     CDS             complement(<1..851)
                     /locus_tag="VFD73_04550"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HZI73285.1"
                     /translation="MSYPRFKFRALGAVGCVAALAALAACSSGGGNTNSNTGTVTVAV
                     VSNPLITDQMIPLTKSKFAKQYPGVTVKFATYTEGDLRAAIQRAISTHSYAFNVVMIG
                     PYETPLYAKNGWLTNLSSQYIAKDPSYGASDLLPPIAKSLSYKGSLYAVPFYGESSMM
                     FYRKDMFAKAGLTMPLHPTWAQIQTFAARLNQPGKVAGICLRGLAGWGDNMAALDTVV
                     NTFGGQWFNMQWKPQLTSPAFTAATNFYVNLVRKYGEPGASSDSFNQLLTLYGQGKCA
                     MWYDATVA"
BASE COUNT          204 a          356 c          373 g          213 t
ORIGIN      
        1 gcgaccgtcg cgtcatacca catcgcgcac ttgccctggc cgtacagcgt cagcagctgg
       61 ttgaagctgt cgctggacgc accgggctcg ccgtacttgc ggacgaggtt gacgtagaaa
      121 ttggtcgcgg ccgtgaacgc cggcgaggtg agctgcggct tccactgcat gttgaaccac
      181 tggccgccga aggtgttgac gacggtgtcc agcgcggcca tgttgtcgcc ccacccggcc
      241 aggccgcgca ggcagatccc ggctaccttg ccgggctggt tcagcctggc cgcgaaggtc
      301 tggatctgcg cccaggtggg gtgcagtggc atggtcagcc cggccttggc gaacatgtcc
      361 ttgcggtaga acatcatcga cgactcgccg tagaacggca ccgcgtacag gctgcccttg
      421 taggataggg acttggcgat cggcggcagc aggtcggagg cgccgtagct cggatctttc
      481 gcgatgtact ggctggacag gttggtcagc cagccgttct tggcgtacag cggcgtctcg
      541 tacgggccga tcatgacgac gttgaacgcg taactgtgcg tgctgatcgc cctctggatc
      601 gcggcccgca ggtcaccttc ggtgtaggtg gcgaacttga ccgtgacccc cgggtactgc
      661 ttcgcgaact ttgacttggt cagcgggatc atctgatcgg tgatcagcgg gttggacacc
      721 accgccacgg tcaccgtgcc tgtattgcta ttggtattgc cgccgccgct cgaacacgcg
      781 gccagcgccg ccagcgcggc tacgcagccc acggccccga gcgcgcggaa cttgaatctg
      841 ggatagctca tctacgaacc tccgcaacgg tgagaagggt gcagctgggg aagcccacca
      901 gaccccgggt tgcgaccgcc tggacaggag cacccaggcc gttctaccct cttggtaacg
      961 ttactaagct tggccagaac gtacgcttgt gacacctgga cgtcaacccc ccgaaaccaa
     1021 atcgatacct agctatgctg ggctatccct agagaggaag ttaggggaac aggaggtctg
     1081 cacttgggga acgatcccag ttccggccgt accggcgctc acccgacgat gcgcgatgtg
     1141 gcagcg
//
LOCUS       DASRPQ010000386         1779 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2237248, whole genome shotgun sequence.
ACCESSION   DASRPQ010000386 DASRPQ010000000
VERSION     DASRPQ010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2237248"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..191)
                     /locus_tag="VFD73_04555"
     CDS             complement(<1..191)
                     /locus_tag="VFD73_04555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73286.1"
                     /translation="MNRWPHPVVVLAVLGLVSSLQAQSVSPPLAEYQERARASFQLQN
                     ASIYPMTVVLEVRGFAITD"
     gene            complement(188..748)
                     /locus_tag="VFD73_04560"
     CDS             complement(188..748)
                     /locus_tag="VFD73_04560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73287.1"
                     /translation="MRFGRLGPLFLALGVVTLRAGELSAQARIISLVATSPGALSVTV
                     TSGAVQTLANVADNAVNNFPTPVGIQTSWDVNPGQTNTVRLIAYFSVPAQALVGPTVQ
                     IPSSRILGRMTTGIPVAYTAMTQNAVGGVGTAGGSLQLFSQNITGTNKTGSRSDNLDL
                     QLNLVGFPSLPAGAYVGVLNIRAVTQ"
     gene            complement(776..1333)
                     /locus_tag="VFD73_04565"
     CDS             complement(776..1333)
                     /locus_tag="VFD73_04565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73288.1"
                     /translation="MHPMFKKALAGAAALLVVGTSSAVAQVGLTSNGATVDLTATKSA
                     TLTVSPNASTATLASITDNSTANNFSAVSLTTAWNLTAGSTVRLIGWFATPAQALVNG
                     TDLIPSSKVEGRVGATAFAPFTGAAVGGVGVAGGSLQLFSQAVAAGSYFGSRTDQLDL
                     RLNLTGTTTLAGNYTGTLNLQAIVQ"
BASE COUNT          351 a          511 c          580 g          337 t
ORIGIN      
        1 tggtcggtga ttgcaaaccc gcgcacctcg agcaccacgg tcatcgggta gatggaggcg
       61 ttctggagtt gaaagctggc tcgggctcgc tcctggtact cagccagtgg aggactgacc
      121 gattgagcct gaagtgaact caccagaccc agcacagcca ggacgaccac tggatgaggc
      181 caccggttca ctgggtcacc gccctgatat tgagcacgcc aacgtaggcg cccgcaggaa
      241 gagatggaaa acccaccaga ttcagctgca ggtccaagtt gtcgctgcgg ctgcccgtct
      301 tgttggtacc ggtaatgttc tgcgagaaca gttgaaggct tccgccggca gtaccgacgc
      361 ctccaacggc attctgagtc atggctgtat acgccacggg aattccggtg gtcattcgac
      421 ccaggattcg gctggagggt atctgaacgg tcggtccaac cagggcctgt gccggaaccg
      481 agaagtaggc aatgagcctc acggtattgg tctgccccgg gttgacgtcc caggaggtct
      541 ggatcccgac gggggtcggg aagttgttca ccgcattatc ggctacgttt gccagcgtct
      601 gtaccgcgcc ggaggtaacg gtcaccgaca gggcgccggg ggaggtcgca accagcgaga
      661 tgattcgcgc ctgggccgaa agctcccccg ccctgagcgt tactacgccc agggcgagga
      721 agagaggtcc gagtctgccg aaccgcatgg attttcggcg tgaacgagtc caggcctact
      781 ggacgatcgc ctggaggttc agggtaccgg tgtagttacc agccagtgtg gtcgtgccgg
      841 tcaggttgag acgcaggtcc agctgatcgg tacggctccc gaagtagctc cccgcggcaa
      901 cagcctggct gaacagctgg agacttccac cggcgacacc cacgccaccc acggcagcgc
      961 ccgtgaacgg agcgaaggcg gttgcgccaa ctcgtccttc gactttcgac gaaggaatca
     1021 ggtcggttcc attcaccagg gcctgggccg gcgttgcaaa ccagccgatc agccggacag
     1081 ttgagccggc ggtcaggttc cacgccgtgg tgagacttac tgcgctgaag ttgttcgccg
     1141 tggagttgtc agtgatcgat gccagggtag cggtggaggc gttcgggctc accgtgagcg
     1201 tcgcgctctt cgtggccgtc agatccaccg tggcaccatt ggaggtgaga ccgacctgtg
     1261 ccacagcgct gctggtgccg accaccagaa gggcggctgc gccggccaac gccttcttga
     1321 acatgggatg cattgctcca ctccggggct agggttcgga acagggaccg tttgattttc
     1381 cagggggaag tacaagaggc gtgcctgtag cacttacgcc tgggcagccg agctttttga
     1441 cagtcgtttg gcatggaaga cgaccggacg cccgggattg cagtcgggcc ctgtcaagca
     1501 gcagttggga ggtccggagc gagcgactcc aagccgggtc cggctcggct taaccggtga
     1561 cgatccaaaa gtttatgcga cagcctccgg cagctctttc gagggcgaga aggagacaag
     1621 ctattctcgt aactaccgct gcagccgggg tttgtatcgg ggttgttaca aaggcgggtg
     1681 gttttaagac gggagtgccg atcgtgtcac ctttcgcccg cactcgctca aaatgcgaca
     1741 aaaaactgcg acgcaagcca cctcaatgat cgtcgttgt
//
LOCUS       DASRPQ010000387         2104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4118156, whole genome shotgun sequence.
ACCESSION   DASRPQ010000387 DASRPQ010000000
VERSION     DASRPQ010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4118156"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            318..2036
                     /locus_tag="VFD73_04570"
     CDS             318..2036
                     /locus_tag="VFD73_04570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73289.1"
                     /translation="MVTQAKSDAEKRTMLGEADERDLVLAAWPGEWSQDVFVVDDLKG
                     ARVSVGLPRHKATSTTASPPHGGAAAQRDYISRIGLWQRLAESPSLSPEGRRQVAAAR
                     GSQSADVALALLARPDLDEEARQLVLKADGYAVPEALIASGRLTSDEIAALIDRHPDS
                     GDLYQAALCSPEGKAAAQRKIALLSFAEAAHVWMYSHLWSKKRPELAAELLLVILAAS
                     ADSPSNVASDDDRYDRSSVIRSIVSNLPPEQRLEFLRSPVHGRLLQRAFLDDKAHDPL
                     TDEELVACVPEITRPQEHVSAGSTPDVIRYIQRFPRLVDLAQPQLEQAVADLDVSGWS
                     PAQCARSDQWDVLLTVARISERASLLGELAQASVHDRATMTDRPGSLHQQRWHDPRRY
                     DLVETLLNKALIADAAASYILDRLGESELNDMAVSAVDGSRLHHLCSAALQRRPPRAL
                     PPFAATTSRQPEKLPSDEDLSRVDDPQAVLLDLIKSRGVDQDRKIEHALSSSYITDDL
                     AWRVPVKALESHPVYGPRLATQVADICGGSPARWQEFIRSWSHQPTQLLASSLFKRLR
                     NAGATD"
BASE COUNT          379 a          701 c          638 g          386 t
ORIGIN      
        1 tcggcggcac ggctccgtgc tatccgtgca ggtagcgcac ccggagcacc gggccgtact
       61 gctcataatc cgccggttgt gggttcgagc cccacccgcc ccacataaac catcggttca
      121 tcttgcaggt tcctcgcgga cggcatcgaa ggctggccag gacgattcgg gtacgatcca
      181 ccaatcgtag tcatatgatt acgcaagtgg ctgctcatat cagttttgat ggcaagggtc
      241 ttcgtccgac aagcgcggtc ccgtcattcc cgtggctggt caagcttgtg actttggtcc
      301 gcgtcacgcc agatggcgtg gttacacagg cgaagagcga tgcggagaag cgcaccatgc
      361 tcggggaggc ggacgagcgg gacctagtgc tagcggcctg gcccggagag tggagccagg
      421 atgtattcgt cgtcgatgat ctcaagggcg cccgtgtttc ggtcggactg ccacggcata
      481 aggcgacctc gacgacggct tccccacctc acggcggcgc ggctgcccag cgggactaca
      541 tctctcggat agggctgtgg cagcgcttgg cagagtctcc gagcctgtcc ccggagggtc
      601 ggcggcaggt cgctgcggct cgtggctcgc agtccgctga tgttgccctc gccctgctag
      661 cgcggcccga tcttgacgaa gaagcgcgac aactggtgct gaaggccgac gggtacgccg
      721 tccccgaggc gctaatcgcc agtggacgac tcaccagcga tgagatagca gcccttattg
      781 accgccatcc cgattcgggt gatctctacc aggctgcctt gtgcagtccc gaaggcaagg
      841 ccgcagctca gcgcaagatc gccttgctgt ccttcgcgga ggcagcccac gtctggatgt
      901 acagccatct ctggtcgaag aagcgaccgg aactcgcggc cgaactcttg ctggtgatac
      961 tggccgcatc tgcagactcg ccgagcaatg tggcttccga tgatgaccgc tatgaccgct
     1021 cctcggtcat tcggtcgata gtctctaacc tgccgccaga acaacggctt gagtttctac
     1081 gcagcccggt tcacggccgc ctactccagc gagcgtttct cgatgacaag gcgcacgatc
     1141 ctctcaccga cgaggaactg gtcgcgtgcg tcccagagat cacgcgcccg caggaacacg
     1201 tttcggccgg aagcactccc gacgtcatcc ggtatattca gcgctttccc cgcctggtcg
     1261 acctcgcgca gccccagctg gagcaggcag tggcggacct cgacgtcagc ggctggtcac
     1321 ctgcccagtg cgcacggtct gaccagtggg atgtcctcct gaccgtcgcg cgcatctccg
     1381 agcgagcaag cctgctcgga gagctggcac aggcatccgt ccatgaccgt gccaccatga
     1441 ctgaccgccc tggctctctt caccagcagc gctggcatga tcctcgccga tacgacctcg
     1501 tcgagacgct gctcaacaag gcgctgatcg cggatgccgc tgccagctac atcctggatc
     1561 ggctggggga aagcgagttg aacgatatgg ccgtctcggc ggtcgatggg agcaggctcc
     1621 accacctgtg ctcagcagcc ctccagcgcc gccctccacg cgcactgcct ccgttcgcgg
     1681 ccactaccag tcggcagccc gaaaagctac cgagtgatga ggacctctcc cgggttgacg
     1741 acccgcaagc agtcctgctc gatttgatca agtcccgagg cgtggaccag gatcgcaaga
     1801 tcgagcacgc gctcagctct tcttacataa ccgatgacct cgcctggcgg gtcccagtca
     1861 aagcccttga gagccatccg gtctacggcc cccggctcgc aacccaggtt gccgacatct
     1921 gcggcggctc cccagcccgc tggcaggaat tcatcaggtc gtggagccac cagcccactc
     1981 agttgctggc atcgagcctc ttcaagcgcc tgcgcaatgc gggcgctacc gactgacgca
     2041 cctacctaac agggactagg ggcgctgacg aggagcttct acgggtgctg gggttagctg
     2101 atcc
//
LOCUS       DASRPQ010000388         1162 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2864724, whole genome shotgun sequence.
ACCESSION   DASRPQ010000388 DASRPQ010000000
VERSION     DASRPQ010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2864724"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..583
                     /locus_tag="VFD73_04575"
     CDS             59..583
                     /locus_tag="VFD73_04575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73290.1"
                     /translation="MKIAGGLIVGAGLLLAVGEAEADWRYTDDKGRSRTVTLKMDVPR
                     QYANTAVEVDGSAHGSNTLVPAGALTLPVPVPEQQPTEPPVLVPGKMWWSYPVSSPER
                     AAAQHEASAKAYSLRQQAGTTTSFNEATITCLGVSNSFTAMDKHRYGIATKEDSYNYF
                     RQCMAQQGHPVGNK"
     gene            841..1038
                     /locus_tag="VFD73_04580"
     CDS             841..1038
                     /locus_tag="VFD73_04580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73291.1"
                     /translation="MTKLSIGLIVGFLLGSATAGLACGMWKLTIEDYVSLSNGKQINV
                     TCTAWIHDVYLATQKSCEAFE"
BASE COUNT          237 a          355 c          364 g          206 t
ORIGIN      
        1 cccatggcgc accctatgca acacctctcc tgactcgagg aggcacgcca taaactccat
       61 gaaaatcgca ggcggactga tcgtaggcgc ggggctactc ctcgccgtag gagaggcgga
      121 ggcggactgg cggtacaccg acgacaaggg tcggagtagg accgtgacgc tcaagatgga
      181 tgtgccaagg cagtacgcga acaccgctgt ggaggttgat ggcagcgccc atggtagcaa
      241 caccctcgtg cctgccggag ccctaaccct gccggtgcca gtgccagagc agcagccgac
      301 ggaaccccct gtcctggtgc cggggaagat gtggtggagc tacccggtga gctcgcccga
      361 gcgtgcggcc gcgcagcacg aggcctcggc taaggcgtac tcgctgcgcc agcaggccgg
      421 gactactact tcattcaacg aggcgaccat cacttgtctc ggcgtttcaa acagtttcac
      481 ggcgatggac aagcaccggt acggcattgc caccaaagaa gattcctaca actacttccg
      541 ccagtgcatg gcccagcaag gtcatccggt ggggaacaaa tagtccactc ggccagctgt
      601 ccacggactt acagcttcga caggcggtcc gcacaggctt ctcggagcta tcccatgggc
      661 tcgccggcct gatggaagac gagagcggtg ccttggatgc cgccgtcctt ctagaacagg
      721 catacccgcc agcgatgatc aacgtcggtg caggtcccgc ttcgtactga agagcttcgg
      781 tggtccggga acgggcctgg ggtttccgta gacggtggac gcgggcaagg aggcctggct
      841 atgaccaagt tgtccattgg attgatcgtg ggatttctgc tcggaagcgc gaccgcgggg
      901 cttgcctgcg gcatgtggaa gctgacaatc gaagactatg tctcactttc gaacggcaag
      961 cagatcaacg tgacgtgcac ggcgtggatt cacgatgtct atctagcaac gcagaagtcc
     1021 tgcgaggcct tcgagtagcc tgtcgggcca gctcacgcgg tagaacgctc gctcagctca
     1081 ctaggttgct acacgcgtcg gtatgcggcc caccagctgc cttcgcagtc agcatccctg
     1141 cggatgccgc ccgccaactg gc
//
LOCUS       DASRPQ010000389         6224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1611398, whole genome shotgun sequence.
ACCESSION   DASRPQ010000389 DASRPQ010000000
VERSION     DASRPQ010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6224
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1611398"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..379
                     /locus_tag="VFD73_04585"
     CDS             <1..379
                     /locus_tag="VFD73_04585"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HZI73292.1"
                     /translation="LITPVIRNADLKTLREISVESHDLAARARERRLKPEEYTGGTFS
                     ISNLGMLDIDEFTAVINPPETGILAVGRIAEKPVVESGQVVIRRRLRLTMSCDHRVID
                     GATGAQFLKTVKGMLENPLALVW"
     gene            482..1879
                     /gene="lpdA"
                     /locus_tag="VFD73_04590"
     CDS             482..1879
                     /gene="lpdA"
                     /locus_tag="VFD73_04590"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HZI73293.1"
                     /translation="MANAFDVIIVGGGPAGYVCAIRAAQLGLATAVVERDKLGGVCVN
                     IGCIPTKALLHSAYVANLVAHDAKELGVEVGTVKTDYGVAMRRSRKVSEQNSRGVEFL
                     MKKHKITVLKGTATVGRNRTIRIGKDEYQARKAVIIATGSRVKGIPQIGLEIDKTTVI
                     SSDEALFLEKLPASMAIIGAGAVGCEFADIFNAFGTKVTLIEALPRILPLEDAEASDA
                     LTKSYKKRGITIMAGVKVKKANVRKDKVSLEIENNGKTETVESEKVLMAAGRALNTEE
                     LGLKDAGVQLTDRGFIKVNLATLETTAPGVYAIGDVAGPPMLAHKGSREGVVVAERIA
                     GHHPQAIKYDNVPSVTYCHPEVASIGLTEEQAKEKKLEYQIGRFPFSANGRARTANET
                     EGFVKIIKDKKYGEIIGAHIVGSHASEIIHELAVARENEYTVEEVDLAIHAHPTLSEA
                     IAEAALDSMQRVIHI"
     gene            1885..2316
                     /locus_tag="VFD73_04595"
     CDS             1885..2316
                     /locus_tag="VFD73_04595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73294.1"
                     /translation="MSRSSLGPFQLVATSMACALCLGLLLITATLLAVDALRVRGGTA
                     ALDQSFYLLVAGTLGGIFLAGYASWHLLAPVPSTYRRGGLAMVSGFATVPLMLICVPV
                     HQLLGRAGLCLLLVLCAALAIVLGRHALGARIIDETPSSRL"
     gene            2291..2968
                     /gene="lipB"
                     /locus_tag="VFD73_04600"
     CDS             2291..2968
                     /gene="lipB"
                     /locus_tag="VFD73_04600"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: protein motif:HMM:NF010925.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HZI73295.1"
                     /translation="MKRRLLVSDLGRESYVTVLELQRSLCRQRLAGELQDDVLLPVEH
                     EPVVTLGRGTHPESLPPPAAELERRGIGVYDVERGGDVTFHGPGQLVGYPILNLRDHR
                     EDLHWYLRTLESALVSALAGLGISAGVRPGLTGVWTQGRKIASIGIHVKQWITYHGFA
                     LNVSTDLSYFGLIVPCGISGVVMTSVGAELGRSDAQLGEEARLAVVQGLSAALDLAPF
                     EANSVRA"
     gene            3022..3576
                     /locus_tag="VFD73_04605"
     CDS             3022..3576
                     /locus_tag="VFD73_04605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73296.1"
                     /translation="MADSTRRPSPEAQADQRIREILRAADSWSREAPRALMPPIRAVC
                     IRLAEMVADQRHYLAPLPEPQESERRTVLSLVADRLRSRPVVEGVEQHLKELEEMELR
                     STGSWAVVASAQTEWITTAIRYLEGCAARLPPGERPDPYWADDVVAGIIASVRALIGV
                     DELQARTEARYSGPIKRVSPEDDE"
     gene            complement(3531..4937)
                     /locus_tag="VFD73_04610"
     CDS             complement(3531..4937)
                     /locus_tag="VFD73_04610"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF006053.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HZI73297.1"
                     /translation="MDTTFIDREQGRMLRELNELLAIPSVSALPAHAADCRRAAEWLR
                     EHLRGLGCPVVDLIEGRGHPVVWAESPKLPGLPTLLIYGHYDVQPPDPLEEWKSPPFA
                     PTIRDGKLYARGASDDKGQLFCLLKAYEATLDGDGRPPLNMHFIFEGEEESGGTLVAD
                     LLRREPKRSTADAALVCDMSYYAPGWPAVYTALRGLCYAEISVRTSERDLHSGTYGGV
                     APNAIETLVRLLSQLKAESGEIRVPNLYEAVDPPTAAELKTWNELPFDREEFIRREVT
                     AKALTGLQNRSVFERVWALPTFEIHGIKGGFIGEGAKTVIPAQAMAKVSLRLVPGQEY
                     EKVGRDLERAVMQLAPAWADVKVTLLHGGDPVQVDVDAPAFEILDEAFERVVGRKAVQ
                     IRAGGSIPIVPELGQGGAPVILTGIGLPDDGLHSPNEKLDLDQLWTGIRTFGEFFELL
                     ATKVYSSSSGETRLMGPE"
     gene            complement(4981..6054)
                     /locus_tag="VFD73_04615"
     CDS             complement(4981..6054)
                     /locus_tag="VFD73_04615"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF021535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HZI73298.1"
                     /translation="MVFFVVVAALFAGYGTAYLASDDIRYLTRAGFEETRILQSRQPL
                     QKLVSSPSLDGSVRRSLQLVLDTRDYAARLGLEAKETYTTYADVGRDTLLLVLQAAPK
                     DCICPHTWKYPIVGRIPYKGFFDPKAARREEARFIARGFDTYLRPSSAFSTLGWFNDP
                     LLSTALDRDSVELAVTVFHEIAHNTLYVRSATPFNESFAQLVGYRSAERFFRERGDSG
                     AAQRAADRWHDEMVLADYYRALIDRLDSLYEGHPDSAALESGRREAALWAHSQLEGPV
                     ASQLKTYRLGKLKERPVNNAQLIGATIYRTHLDWFDHWYHEHGDDIGRSVSALKQLMQ
                     GAEGDSAFARLQRAVADSSARTK"
BASE COUNT         1158 a         1927 c         1968 g         1171 t
ORIGIN      
        1 gctgattact ccggtcatcc gtaatgccga tctcaagacg ctgcgggaga tctccgtgga
       61 gtcccacgat ctcgcggccc gagcccgcga gcggcgactg aagcccgagg agtacactgg
      121 tgggacgttt tcgatctcga acttgggcat gctcgacatc gacgagttta cggcggtgat
      181 caatccaccg gagacgggga tccttgcagt cgggcgtatc gccgagaagc cggtggtcga
      241 gtcgggccag gtggtcatcc ggcggcgact ccgactcacc atgtcgtgtg accaccgggt
      301 gatcgatggc gccaccggag cacagttcct caagaccgtc aaggggatgc tggaaaatcc
      361 actggcgctc gtttggtaac gcgtaaacag cgacaggtca gtactgaacg gggtcggcac
      421 ttgccacccc gtttactgtt cactggtcac cgtggaagct gtttcaacca atgaggcacc
      481 tgtggcaaac gcgtttgacg tgatcatcgt cggtgggggg ccagcaggat acgtgtgcgc
      541 catccgcgcg gcacagctcg gactcgccac tgcggtggtc gagcgggaca agctcggcgg
      601 cgtgtgcgtc aacatcggct gcattccgac taaggcgctg ctgcacagtg cctacgtggc
      661 gaacctcgtc gcccacgacg ccaaggagct gggcgtggag gtcggcacgg tcaagaccga
      721 ctatggcgtc gccatgcggc gatcacgcaa ggtgtctgag cagaactcca ggggcgtcga
      781 attcctcatg aagaagcaca agatcaccgt gctcaagggg acagcgacgg tcggccgcaa
      841 tcggaccatc cgcatcggga aggatgagta ccaggcgcga aaggcggtga tcatcgcgac
      901 cggatcccgg gtcaagggca ttccccagat cggtctggag atcgacaaga ccaccgtgat
      961 cagctcggac gaggcgctct ttctggagaa gctccccgcc tccatggcca tcatcggggc
     1021 cggcgcggtc ggctgtgagt tcgccgacat cttcaacgcg ttcgggacca aggtcactct
     1081 gatcgaggcg ttgccccgaa tcctcccttt ggaggacgcc gaagcctccg acgcattgac
     1141 caagagttac aagaagcgcg gcatcaccat catggcgggg gtcaaggtca agaaggcaaa
     1201 cgtgcggaag gacaaggtct cgctcgagat cgagaacaat ggcaagactg agacggtcga
     1261 gtccgaaaag gtcctgatgg ccgcggggcg cgcgctaaac acggaggagc tcggcctgaa
     1321 ggatgcgggg gtgcagctga ccgaccgcgg cttcatcaag gtgaatctcg cgaccctcga
     1381 gaccaccgcg cccggagtgt atgccattgg agatgttgct gggccgccaa tgctcgctca
     1441 caagggcagc cgcgaggggg tcgtggtagc tgagcggatc gccgggcatc acccgcaagc
     1501 catcaaatac gacaacgttc ccagcgtgac gtactgccat cctgaggtgg ccagcatcgg
     1561 cctgaccgaa gaacaggcca aggagaagaa gctggagtat cagattggcc gctttccctt
     1621 cagcgccaat gggagggccc ggacagcgaa cgagaccgaa gggttcgtga agatcatcaa
     1681 agataagaaa tacggtgaaa tcatcggtgc ccacatcgta gggagccacg cctcggagat
     1741 catccacgaa ctggcggtcg cgcgggagaa cgagtacacg gtagaagagg tcgatctcgc
     1801 catccacgcg catcctacgc tgtccgaagc catcgctgaa gcagcgctcg actcgatgca
     1861 acgagtcatc cacatctgag cgcgatgagc cggtcgtcac ttggcccctt ccagttggtt
     1921 gccacctcga tggcttgtgc gctctgtctc ggactcctcc tgatcaccgc tacgttgctg
     1981 gccgtcgacg cgctgcgagt ccggggcggg accgcggcgc tcgaccaatc cttttacctc
     2041 ctcgtggctg gtaccctggg tgggatattt ctggccggct acgccagctg gcaccttctc
     2101 gccccggttc cttcgaccta ccgtcggggc ggccttgcga tggtcagtgg atttgccacc
     2161 gtcccgctca tgcttatttg cgttccggta catcaactcc tgggacgcgc cggcctatgc
     2221 ctgctgctcg tcctgtgtgc tgctctcgca atcgtgctgg ggcgccatgc ccttggtgcc
     2281 agaatcatcg atgaaacgcc gtcttctcgt ctctgatctc ggacgtgagt cctacgtcac
     2341 cgtgctggag ctgcagcgca gcctctgccg gcagcggctt gccggagagc ttcaggacga
     2401 tgtgcttttg ccggtggagc acgagccagt ggtcactttg gggcgtggca cccaccccga
     2461 gagtttgccg cctccagcag ctgagttaga acgccgggga ataggagtgt acgacgtcga
     2521 gcgcggtggc gacgtcacct tccacggacc cggtcagctg gtgggatatc ccatcctgaa
     2581 cctgagggac caccgggagg acctgcactg gtaccttcgg actcttgagt ctgcattggt
     2641 gagcgcattg gctggccttg gcatcagcgc cggcgtccgc cccggtctga ccggggtctg
     2701 gactcagggc cgcaagattg ccagcatcgg gattcacgta aagcagtgga ttacctacca
     2761 cggctttgct ctcaacgtca gcactgatct ttcctacttt gggctgattg tgccgtgcgg
     2821 aatttccgga gtggtcatga cgagtgttgg ggcagagctg gggcggtcgg acgcccagct
     2881 cggggaagag gcccgtctgg ctgtagtcca gggcctctcg gcggcgcttg atctcgcccc
     2941 attcgaggcc aattccgttc gggcgtaacc tggctcctac cccggttgcc tttgcggggc
     3001 caaccgattt ttctccctac catggccgac tcgaccaggc gtccgtcacc tgaggcccag
     3061 gctgaccagc ggatcaggga gattctccgg gcagcagaca gctggtcgcg tgaggcgcca
     3121 cgggccctca tgcctccgat ccgggcagtg tgtattcgcc tggccgagat ggtggcggac
     3181 cagcgtcact acctggcgcc tctgccggaa cctcaggaat cagagcgccg aacggtgctg
     3241 tcgctggtgg ccgaccgctt acgctctcgt cctgttgtgg aaggggttga gcagcacctg
     3301 aaggagctgg aagaaatgga gctgcgctcg acgggctctt gggctgtcgt agcgtcggcg
     3361 cagaccgagt ggatcaccac ggccattcgc tatctggagg gctgcgccgc gcggcttccg
     3421 cccggcgagc ggcccgatcc ctactgggcc gacgatgtcg tggctgggat catcgcctcg
     3481 gtccgagcgc tgattggggt agatgagctc caggcacgaa ccgaggctcg ctactccggt
     3541 cccatcaagc gggtctcgcc ggaggacgac gaataaacct tcgtcgcaag caactcgaag
     3601 aactctccaa aggttcgaat cccagtccac aactggtcca gatcgagttt ctcatttggt
     3661 gagtggagtc cgtcatcggg caatccgata ccggtcagga tcaccggcgc acctccctgc
     3721 cccagctccg gcacaattgg aatcgaaccc ccagcgcgaa tttgaacggc ctttcgtccc
     3781 accacccgct cgaacgcttc gtcgagtatt tcgaatgcag gcgcgtcgac atccacttga
     3841 acgggatcgc caccatggag tagcgtcact ttgacatcgg cccacgcggg agccagctgc
     3901 atcaccgccc gctcgagatc ccgcccgacc ttttcgtact cctggcccgg caccaatcgc
     3961 aagctcacct tggccatggc ttgcgccgga atgacggttt tggccccctc gccaatgaag
     4021 cctcccttga tcccgtgaat ctcgaaagtg ggcagagccc agacccgctc gaagaccgac
     4081 cgattctgga gcccggtcag cgcctttgcg gtgacctctc ggcggatgaa ttcctcccga
     4141 tcgaagggga gttcgttcca ggtcttgagc tcagccgccg tgggcgggtc cacggcctcg
     4201 tagaggttgg gtacccggat ttcccccgac tcagccttca gctggctgag caatcggacg
     4261 agcgtctcga tcgcgttggg cgcgaccccg ccgtaggtac cggagtgcag atcgcgctcc
     4321 gaggtccgca ctgagatctc tgcgtaacag aggcctcgaa gggcagtgta gaccgcgggc
     4381 cagcccggag cgtagtaaga catgtcgcac accagcgcgg catcggcagt gctgcgcttc
     4441 ggctcccgcc gaaggaggtc ggcgaccagc gtgccgccgg attcttcctc cccctcgaaa
     4501 atgaaatgca tattgagggg cggccggccg tcaccatcga gcgttgcctc gtacgccttg
     4561 agtaaacaga agagctgccc cttgtcgtcc gatgcaccgc gcgcgtagag cttgccgtct
     4621 cggatggttg gagcgaacgg aggggacttc cattcctcga gcggatccgg cggctgcacg
     4681 tcgtagtgtc cgtagatcag aagggtgggc aggcccggaa gcttcggact ttccgcccac
     4741 accaccggat ggccccgtcc ttcaatgaga tctacaacag ggcagccaag ccctcgcagg
     4801 tgctctcgca gccactcggc cgctctccgg cagtctgctg catgtgccgg aagcgcactg
     4861 acgctgggaa tggcaaggag ctcattgagc tcccgcagca tacggccctg ctcccggtca
     4921 atgaatgtgg tgtccatagg ttcctgagct ggtaaaggat ctgatcccgg accgtgactt
     4981 ttacttggtg cgcgccgatg agtcggcgac cgcccgttgc agtcgggcga atgcgctgtc
     5041 tccctcggcg ccctgcatca gctgtttgag ggcgctcacg ctcctgccaa tatcatcccc
     5101 gtgctcgtga taccagtggt cgaaccagtc gaggtgggtt cgatagatag tcgccccgat
     5161 caactgagcg ttgttgacgg gacgttcctt gagctttccc agtcgatagg ttttgagctg
     5221 gctcgccacc ggcccttcca actggctgtg ggcccagagg gctgcctccc gtctgccgga
     5281 ctcgagtgcc gcagagtcgg gatggccttc ataaagcgaa tcgagccggt cgataagagc
     5341 gcgatagtaa tcggccagca ccatctcatc gtgccatcgg tctgccgcac gctgcgccgc
     5401 accgctgtcg ccccgctccc ggaagaatct ctccgccgag cgatacccga cgagctgagc
     5461 gaagctctcg ttgaacggag tggcgcttct gacgtagagc gtgttgtggg caatttcatg
     5521 gaatacggtg accgcaagct cgacggaatc gcggtcgagc gcggtcgaga gcagcggatc
     5581 gttgaaccag cctaacgtgg agaaggccga ggatggacga aggtaggtgt cgaagccccg
     5641 tgcgataaag cgggcttctt cccgccgcgc tgccttggga tcgaagaacc ccttgtacgg
     5701 tatcctcccg acaatgggat acttccaggt atggggacag atgcagtcct tcggggctgc
     5761 ctgaaggacg agtagcaggg tgtcgcgacc aacgtcggcg taggtagtgt aggtctcctt
     5821 tgcctcgagt ccgagtcgcg cggcgtagtc gcgggtatcc agcaccagtt ggagcgagcg
     5881 ccgcaccgac ccatcgagag acgggctgct gaccagcttc tgcagcggct ggcgtgactg
     5941 caggatcctg gtctcttcga acccggcgcg ggtgagatac cggatatcgt cgctcgccag
     6001 gtaggcggtg ccatatccgg caaagagcgc ggccaccacc acgaagaaca ccatgcggct
     6061 caacgaatcc ggaccagcgc cacgcgcggc tggatgctgc tcggcaggga cgctccagtt
     6121 ccaccggtca cccgaaggtc aaccgctgcc gcgccgggtg gctgcaccac taggacatgc
     6181 tttccagagc cggctcgaag cgttccggtg tgctcgtagc caat
//
LOCUS       DASRPQ010000390         1618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3187975, whole genome shotgun sequence.
ACCESSION   DASRPQ010000390 DASRPQ010000000
VERSION     DASRPQ010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3187975"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..1455)
                     /locus_tag="VFD73_04620"
     CDS             complement(1..1455)
                     /locus_tag="VFD73_04620"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase family protein"
                     /protein_id="HZI73299.1"
                     /translation="MPSFDSFDGGDRLPFRCIPPIASQASHQENRVIDLKALESQIRD
                     GSVDTVISAITDLQGRLMGKRVTGDFFLEQAHHGTHLCTYLLGTDMEMRTPAGYRLMS
                     WETGYGDYLAAPDWSTLRIIPWLEKTALVLADVKDEATGALVPVAPRTVLRQQVERAR
                     QMGFEAMMASELEFYLLRDSYEGAARKNFHDLEPFGWYNEDYHLLQASKAEPLYRRFR
                     NEMSAAGIPVEFSKGEAAPGQHEVNIHYADALVSADRHALFKHGLKEMAWQSGHAVTF
                     MAKPDQSWTGNSAHVHVSLRRIEGSDPAFHRAGASPYGMSETMRHFLGGLMSGIRELA
                     FFIAPFVNSYKRYAPGSWAPTNLVWGRDNRTCAFRIVGDGAALRIETRLPGGDANPYL
                     AYAAIIGAGLRGIQQQIEPPAEYRGNGYEANNVPRIPRALWEAAQLLERSALAREIFG
                     PDVVEHYVNTANVEQEAYDSTVTCWERQRYLERG"
BASE COUNT          282 a          528 c          496 g          312 t
ORIGIN      
        1 tcatccccgc tccaaatacc gttgccgctc ccagcacgtc acggtgctgt cgtatgcctc
       61 ctgctccaca ttggcggtat tcacatagtg ctccaccaca tccgggccaa agatctcccg
      121 cgcgagcgcg ctccgctcca gaagttgggc agcttcccag agggcccgcg ggattcgggg
      181 gacgttgttg gcctcgtagc cgttaccgcg gtattcggct ggcggctcga tctgctgctg
      241 gataccgcgg agccccgcgc cgatgatggc tgcgtaggcg agatatggat tggcgtcgcc
      301 tcccggcaac cgggtctcga tccgaagcgc ggcgccgtcg cccacgatcc gaaaagcaca
      361 ggtgcggttg tctcggcccc acaccaggtt ggtgggcgcc cagctgcccg gcgcgtaccg
      421 cttgtacgaa ttcacgaacg gagcaatgaa gaaggcaagc tcgcgaattc cgctcatcag
      481 cccacccagg aagtgccgca tcgtctctga catgccgtag ggcgatgcgc cggcacggtg
      541 gaatgcaggg tcgctcccct cgatgcggcg caggctgacg tgcacgtggg cgctgtttcc
      601 ggtccagctc tggtccggtt tggccatgaa ggtgacggca tgcccgctct gccaggccat
      661 ctccttgaga ccgtgtttga agagcgcgtg tcggtccgcc gacaccagtg cgtcggcgta
      721 gtggatgttg acctcgtgct ggcccggcgc tgcctcgccc ttgctgaact ccacgggaat
      781 tccggctgcc gacatctcgt tccgaaaccg gcgatagagt ggctccgcct tgctggcttg
      841 aagcagatga taatcctcgt tgtaccagcc gaacggctcc agatcatgaa aattcttcct
      901 ggcggctcct tcatagctgt cacggagcag gtagaactcg agctcgcttg ccatcatggc
      961 ctcgaagccc atctggcgcg cccgctccac ttgttggcga agcacggtcc tgggggcaac
     1021 cggcaccagt gccccggtag cctcgtcctt cacgtcggcc agcacgagcg ccgttttctc
     1081 cagccacggg atgatgcgga gcgtggacca gtccggggct gcgagatagt cgccgtaacc
     1141 tgtctcccag ctcatcaggc ggtagccggc cggtgtgcgc atctccatgt cggtgccgag
     1201 gaggtaggtg cagagatggg tgccgtgatg ggcctgctcc aggaagaagt cgccggtcac
     1261 ccgcttgccc atcagtcgcc cctgcagatc ggtgatggcg ctgatgacgg tgtcgacgga
     1321 cccgtcccga atttgcgact cgagcgcctt tagatcgatc acccgattct cctgatgcga
     1381 ggcctgggaa gctatcgggg ggatgcaccg gaacggaagc cggtcgccgc cgtcgaacga
     1441 atcaaatgac ggcatgcact ctgcactccg cgaggcgatc acgctgtcaa ctgccgaatt
     1501 cgtggctcaa gcctcacagc acggccaact ctttcactct tgctgcaaca cgctgcagct
     1561 ccacacgaaa ggaagcctgc atcatgcatc gtccactcag atcagcggga tacctggc
//
LOCUS       DASRPQ010000391         1012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4119079, whole genome shotgun sequence.
ACCESSION   DASRPQ010000391 DASRPQ010000000
VERSION     DASRPQ010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4119079"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..459)
                     /locus_tag="VFD73_04625"
     CDS             complement(<1..459)
                     /locus_tag="VFD73_04625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73300.1"
                     /translation="MSSKIAVFALAAALSSFRAAPLWGQVRVQAVTLAVHGGGYSAVD
                     DAFNLQTGTTDNFKPGFVLGGSVGLRLHRNVELRASLVGAQSPLRVNGTETGTYLNRY
                     YVGADVKGEYALGSGITPYGLAGGGFVILHEKGTSAGDKTQGFGHLGLGVA"
BASE COUNT          184 a          338 c          315 g          175 t
ORIGIN      
        1 cgcgactccg aggccaagat gcccgaagcc ctgcgtcttg tcaccggcgc tcgtgccctt
       61 ttcgtgcagg atcacaaacc cgccgcccgc caggccgtac ggtgtgatcc cgctgcccag
      121 cgcgtactcc cccttcacgt cggctccgac gtaataacgg ttcaggtacg tcccggtctc
      181 ggtgccgttc acacggagag gactctgcgc ccccaccagg ctagcacgga gttccacatt
      241 cctgtgcagc cggaggccga cactaccgcc cagcacaaac cccggcttga agttgtctgt
      301 ggtacccgtc tggaggttga aggcatcgtc cacggcgctg tagcctccgc cgtggaccgc
      361 gagggtcacc gcctggacgc ggacttggcc ccacagcggt gcagcgcgga aactggacaa
      421 cgcggcggcg agcgcgaaga cagcgatctt ggaactcatt tggcttgccc tgctcggtcg
      481 cccacgctca tggtgtcgat tccgaggaaa gagtttagga aacacaagcc tgtcagggcc
      541 gtcctaaggc ctccgacacc tgcgagctat tgtaatcatc attcccgcac cgtgaaggct
      601 ccgtgaggac gacaggaaga aggcaaggcg cggccgcagc gctgaggccc taccatggaa
      661 gagcccaaga gtcacggaac cgcttccaga gacgggtgat tctcttcaca cgtggtttca
      721 agttccttgc ggatcgcctc accatgttgc gcgatgatcg ggggccatac gagagagggg
      781 cgaactggaa cgctgcgacg ggggcatctc gcgatgtcgc tccacctccg cccgccagca
      841 ccctcctcag cgcgggcagc cagggccccc cacgcggtcg gcttgctggc aagggagacg
      901 atttccgtcg cgctcgaagc gctgcgccag aacaagttgc gctcgctgct gacgatgctg
      961 ggcattgtca tcggcgtggc ctcggtggtg acggtcctgg ccatcggcag cg
//
LOCUS       DASRPQ010000392         1147 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_672268, whole genome shotgun sequence.
ACCESSION   DASRPQ010000392 DASRPQ010000000
VERSION     DASRPQ010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_672268"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VFD73_04630"
     CDS             complement(<1..317)
                     /locus_tag="VFD73_04630"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HZI73301.1"
                     /translation="MPAGVKSPASMPQPLGRAPSPGAIWRLLILALVLAAGTTFSPAG
                     LGAQETVGGPAVTSDPGEIVRPGDLIRLKIWREPDMSGDIAVDEAGVATLPRLGAWRV
                     ANLP"
     gene            525..>1147
                     /locus_tag="VFD73_04635"
     CDS             525..>1147
                     /locus_tag="VFD73_04635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73302.1"
                     /translation="MNSTKWLVLLVTLALITRVGAALAIGADFHFADEAIYVDTARRV
                     SQGGGFGADYSQAPGYPVFLMLVSLGNLGSPGFLRLAQAVVVSMGALSVFWLADCTFG
                     RLTAIAAGLVYALDPLLAISSGLLYPEAISALVLPLAVLTVWLGATQDKLLRSALAGG
                     LLGVLALLRPVALILPIVVAVWIALGTTLPPRRRLVHVAAVALAFLLV"
BASE COUNT          192 a          387 c          322 g          246 t
ORIGIN      
        1 ggaagattgg ccactcgcca cgcacccaga cgcggaagag tggcgacccc tgcttcatcc
       61 accgcgatgt cgcccgacat gtccggctcc cgccagatct tcaggcgaat aaggtcgccg
      121 ggacgaacga tctctccggg atctgacgtc accgcaggac cgcccacagt ctcctgcgcg
      181 cccagacctg caggcgagaa ggttgtccct gccgccagga cgagcgccag aatgagcaga
      241 cgccatatcg cgcccggcga tggcgcgcgg cccaggggct gcggcatgga agccggagac
      301 tttacgccgg cgggcatgac attactctca accacaacga ctcaggtcac acgacctgcg
      361 tacagacgaa gaaaatttca tgacgtacct cctccaactt gctgccgatg ttgaataccc
      421 gcaagccact gagaggctcc catcggcggc actgtaactc ctgagctaca ttcgagttcc
      481 cgacttctcg gtttcccgtc cgagctgtct gaaagtgagc gccggtgaac tccaccaaat
      541 ggttggttct cctcgtaact ctggctctga tcacccgggt gggtgccgca ctggcgatcg
      601 gcgccgactt tcacttcgcg gacgaagcca tctatgtaga tacagcccga cgggtatccc
      661 aaggcggtgg attcggagcc gattattccc aggcccccgg atacccggtc ttcctcatgc
      721 tcgtctctct cggcaacctc gggtctcccg gttttcttcg cctggcccag gcggttgtcg
      781 tttcgatggg agctttatcg gtgttctggt tggccgactg cacgttcggc cgcctgaccg
      841 caatcgctgc cggcctggtg tacgccctcg atccgctcct ggccatctct tccggactcc
      901 tttacccaga ggcgatttcc gctctggtgc ttcctctcgc cgtactcaca gtctggctgg
      961 gcgccacaca agacaagctc ctgaggtctg cgcttgccgg tgggctccta ggtgtgcttg
     1021 ctctcctcag gccggtggct ctgattctgc caatagtcgt agcggtgtgg atcgctctcg
     1081 gaacaacgct ccccccgcgc aggcgtctcg tacatgtagc cgcggttgct ctggcctttc
     1141 ttctcgt
//
LOCUS       DASRPQ010000393         1869 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2865997, whole genome shotgun sequence.
ACCESSION   DASRPQ010000393 DASRPQ010000000
VERSION     DASRPQ010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2865997"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..612
                     /locus_tag="VFD73_04640"
     CDS             <1..612
                     /locus_tag="VFD73_04640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73303.1"
                     /translation="GALGDMGCYSYDTIFRVLKLEAPLSVEASSTDRYAETYPMASII
                     RYQFAARGEMPPVTFTWYDGGLKPARPAELEENRPFKGEGEEDEGLLFIGDSGKILCG
                     FDGRGPKLIPQAKMDAFQPPPKTLPRSPGNEREWLDACKGGTVKPGGNFEFSSMVTET
                     LLLGNVATMLGQQLIWDRPNLQVVNAGAADKYIRPERRAGWEL"
     gene            649..1512
                     /locus_tag="VFD73_04645"
     CDS             649..1512
                     /locus_tag="VFD73_04645"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HZI73304.1"
                     /translation="MTALSRRQFCETVAQQAAFAGLFSLGAREFLAKPLDLPIGCQTW
                     SVRDLIAKDFPGALQQLKTAGFEAIELCSPVGYSDSGFAGLAKYKPAELRAMLSDVGL
                     SCVSSHFNMDELRKDQAGRIAWAKDVGLTQMIVPSLDGPPHPTMDDVKRAADEYNKMG
                     EQAKAAGIQQGLHNEEFELTTVDGKRTYDLLFELLRPELVKFQFQVSTIRQGYDAAEY
                     FTKYPGRFISMHVQGWSANTRKIMPVGQDTLDWKKIFTAARTGGIRNYFVEMNLDMMR
                     ASVPYLRGLQV"
     gene            complement(1652..1725)
                     /locus_tag="VFD73_04650"
     tRNA            complement(1652..1725)
                     /locus_tag="VFD73_04650"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1689..1691),aa:Pro,seq:ggg)
BASE COUNT          396 a          591 c          584 g          298 t
ORIGIN      
        1 ggcgcgctgg gcgacatggg ctgctacagc tatgacacca tcttccgcgt gctcaagcta
       61 gaagcaccgc tcagcgtgga ggccagctcc accgatcggt atgccgagac ctaccccatg
      121 gcttccatca ttcgctacca attcgccgcc cgcggcgaga tgccgccggt caccttcacc
      181 tggtacgatg gcggtctcaa gccggcccgt ccggctgagc tggaagagaa ccgccccttc
      241 aaaggtgagg gcgaagaaga cgaggggctg ctgttcatag gggacagtgg gaagattctc
      301 tgtgggttcg acggccgggg tcccaaactg atcccgcagg ccaaaatgga cgcgttccag
      361 ccaccgccca agacgctgcc ccgctcgccc ggcaacgagc gcgaatggct cgacgcctgc
      421 aagggcggca ccgtcaagcc gggcggcaat ttcgagttct ccagcatggt caccgagacc
      481 ctgctgctcg gtaacgtggc cacgatgctc gggcaacagc tcatctggga ccgccccaat
      541 ctccaggtgg tcaatgcggg agccgccgac aagtacatcc gcccggaacg ccgtgcggga
      601 tgggagctgt aaccgtccgc cggcccgccg agcgatgtgg gaggagccat gacggcactt
      661 tcaagaagac agttttgtga gaccgttgcg caacaagccg cgtttgccgg actattctcg
      721 ctgggggcaa gggagttctt ggccaagccg ctcgatctac ccattgggtg ccagacctgg
      781 tcggtcagag acctgatcgc caaagacttc cccggcgccc tccagcagct taagacggcg
      841 ggctttgaag ccatcgagtt gtgctcgccg gtgggatact ccgactcagg cttcgccggc
      901 ctcgccaagt acaaacccgc cgagctgcgt gccatgctga gcgatgtcgg cttgagctgc
      961 gtgagctcgc atttcaacat ggacgagctg cggaaggacc aggccggccg gatcgcctgg
     1021 gccaaggacg tggggctgac ccagatgatc gtccccagcc tcgatgggcc accccatccc
     1081 accatggacg acgtcaaacg ggcggcggat gagtacaaca agatgggcga gcaggccaaa
     1141 gcggccggca tccagcaggg cctgcacaac gaggaattcg agctcaccac ggtggacggt
     1201 aagcgcacct acgacctgct cttcgagctg ctacgaccgg agctggtgaa gttccagttt
     1261 caggtctcga ccatccgcca gggctacgac gccgcggagt atttcaccaa gtaccccggg
     1321 cgctttatct ccatgcacgt acaaggctgg tccgcgaaca ctcgaaagat catgccggtg
     1381 ggacaggaca cactagactg gaagaagatc ttcacggcgg ccaggacggg cggcatccgg
     1441 aattacttcg tggagatgaa cctggacatg atgcgggcca gcgttccgta cctgcggggc
     1501 ctgcaagtct gagcgacggc gcactgcccg gcgtcccgac gcaaaacggg acggcgggat
     1561 ttgagcggtc agtcgcgagc gcagcgagcg acggcgccaa gagcccgccg gcccgacgca
     1621 aaacggcgag cctgtcggct cgccgtttaa gtcgggacgg cgggatttga acccgcgacc
     1681 ccctgaaccc cattcaggtg cgctaccgga ctgcgctacg tcccgaaata ctagacgggt
     1741 agacgcgtag acgcccagac gcctaggaaa ggcaacaaca aacaactacc ggactaatgc
     1801 caagaaaagg ctcaggaaga tatctgagcc cctgggtata gtaaacgcat gactcgctcg
     1861 acgctcttc
//
LOCUS       DASRPQ010000394         1952 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4433246, whole genome shotgun sequence.
ACCESSION   DASRPQ010000394 DASRPQ010000000
VERSION     DASRPQ010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1952
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4433246"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..269)
                     /locus_tag="VFD73_04655"
     CDS             complement(3..269)
                     /locus_tag="VFD73_04655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73305.1"
                     /translation="MPRRLLYGLPDALRAARYTNLPEPADIARTINAGLIPWIERRDG
                     RWSFDEGDIDRIAGALGLTKPAPEPNLAPHGIAEISAKIDELLR"
     gene            370..852
                     /locus_tag="VFD73_04660"
     CDS             370..852
                     /locus_tag="VFD73_04660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73306.1"
                     /translation="MPCPHCQSASTTEQEGRTTHGYRRFRCRACERRFNERTGTVLNR
                     VQVPSDIVFLVVFWRLRYKLSLRDLAEMFLLRGIVFTHEAVRDWEARLAPLLSDALRK
                     RRSGKIGRSWHADESVPRTHWQRWQCGAAHEMRGGPSEPAVRGRLQTASSCNGQEPVW
                     "
     gene            1263..>1952
                     /gene="ltrA"
                     /locus_tag="VFD73_04665"
     CDS             1263..>1952
                     /gene="ltrA"
                     /locus_tag="VFD73_04665"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019332377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZI73307.1"
                     /translation="MAKPFDISKQEVWDAYQRVKANRGAAGVDEQSIAEFEGDLRNNL
                     YKLWNRLVSGSYFPPPVRQVEIPKETGGTRMLGIPTVADRIAQSVVKARLEPVLEPRF
                     HADSYGYRPGRSALDAVGTARQRCWRSDWVLDLDIKAFFDSIDTELLMRAVCKHATSR
                     WEVLYIERWLKAPVQMPDGTIVERTRGTPQGGVISPLLANLFLHYAFDLWMTRNFPDV
                     RFERYADDAICH"
BASE COUNT          359 a          557 c          697 g          339 t
ORIGIN      
        1 ggttacctaa gtagttcgtc gattttcgca gaaatctcag caatgccgtg tggcgccagg
       61 ttcggttcgg gcgccggctt tgtcagcccc agcgctccag cgatgcgatc gatgtcgcct
      121 tcgtcgaagc tccaccggcc atctcgccgc tcgatccagg ggatcagccc ggcgttgatg
      181 gtccgggcga tgtcggcggg ttcgggcagg ttggtgtagc gggccgcccg gagggcgtcg
      241 ggcaagccat agagcaagcg tcgaggcaca ggaacctcct cagatggttc cgtcagcgtt
      301 cagggcgggt tgccagggga gcggtcatcc gatatagggt cgcggccccg tctggagaga
      361 gcccgcccca tgccgtgccc gcattgtcag tcagcatcga ccaccgaaca ggaggggcgg
      421 accacgcatg gctaccggcg gttccggtgc cgggcctgcg aacggcggtt caacgagcgc
      481 accggcacgg tgctgaaccg ggtccaggtg ccgagcgaca tcgtgttcct ggtggtgttc
      541 tggcggctgc gctacaagct gagcctgcgg gatctcgccg agatgttcct gctccgcggc
      601 atcgtgttca cccatgaggc ggtgcgggac tgggaggcca ggctggcgcc gctgctcagc
      661 gacgccctgc gcaagcgacg gagcggcaag atcggccgca gctggcacgc cgacgagagt
      721 gtgccaagaa cgcactggca gcgatggcag tgcggtgctg cacacgagat gaggggaggc
      781 ccctcggagc cggccgtcag gggcaggctt caaaccgcct caagctgcaa cggtcaagag
      841 ccggtgtggt gagcgttgag gaaaaggcga ggctggacct cgtcaggtag ggactgagaa
      901 gacgagcgaa agcgaaccgc tgatgacgtg tcgaaagcgt atggatgatg tcaaaaccgg
      961 agggttctcg ttactccggg acaagtcggg cgggcgacct gatttccggc tcggcggcat
     1021 ccggcatgga ggcggcgtga cctcagtcca ggctcgtatg cggaacttgg gaacctgtcg
     1081 ctccgatgcg aagggagaag tccaagtggg cagcccccat gaggacgagc gtaccgaggc
     1141 ggagcacagg gacggagcaa cccgtagtag gggtgagggt cctgtaatgg ggccggaccg
     1201 aaggggttgc cttatccggc ccgagccctg ggtcaacctg caaggggagg aacccggcgg
     1261 tgatggccaa gccgtttgat atttccaagc aggaggtgtg ggacgcgtac cagcgtgtca
     1321 aggcgaaccg cggggcggcg ggcgtcgatg agcagtcgat tgcggagttc gagggggatc
     1381 ttcggaacaa cctctacaag ctctggaacc ggctggtctc gggcagctac tttccgcctc
     1441 cggtccggca ggtcgagatc ccgaaggaga cagggggcac ccgcatgttg ggaataccca
     1501 cggtagcgga tcggatcgcc cagagcgtcg tcaaggcgcg tctggaaccg gtcctggaac
     1561 ctcggttcca tgccgactcc tacggctatc gcccgggccg gtcggcgctc gatgccgtcg
     1621 ggacggcgcg ccagcggtgc tggcggtcgg attgggtctt ggatcttgac atcaaggcct
     1681 tcttcgacag tattgacact gaactcctga tgcgcgcagt ctgcaaacat gcgacgagcc
     1741 ggtgggaggt gctgtatatc gagcgatggc tcaaggcacc agtccagatg ccggacggca
     1801 ccattgttga gcggaccagg ggaacaccac agggtggagt gatttcaccg ctgctggcca
     1861 atcttttcct gcattatgcg ttcgatctct ggatgacgcg gaactttccg gacgtccggt
     1921 tcgaacggta cgccgacgat gcgatctgcc at
//
LOCUS       DASRPQ010000395         1234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2866021, whole genome shotgun sequence.
ACCESSION   DASRPQ010000395 DASRPQ010000000
VERSION     DASRPQ010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1234
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2866021"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..312)
                     /locus_tag="VFD73_04670"
     CDS             complement(<1..312)
                     /locus_tag="VFD73_04670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73308.1"
                     /translation="MRRLASWSLDRVVGAWLAWFGLIVAALAFDVMRHWQTSAPAQRP
                     VSAAEPGKLDTVGAAKTARQPTLPEQHTDFVYSVVIDRVLLLRWAIVVLGPPTLLTAL
                     WL"
     gene            complement(326..757)
                     /locus_tag="VFD73_04675"
     CDS             complement(326..757)
                     /locus_tag="VFD73_04675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73309.1"
                     /translation="MRVKHIRLLALLAAILAVSRCSTDVCACPPVPPTALVYGRVTAP
                     TGEAVPGTVVRAYSAPAPGCHADGGAGQDYGVIAALDDGSFSMGLAGADARDSICVFV
                     FARPDPHAQGLTVSDTTLVLLDFGIDVPQDSAHVDLVLRAL"
     gene            complement(865..>1234)
                     /locus_tag="VFD73_04680"
     CDS             complement(865..>1234)
                     /locus_tag="VFD73_04680"
                     /inference="COORDINATES: protein motif:HMM:NF024820.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI73310.1"
                     /translation="FDAPTRRLRLALETRIRNLGIASGLAYLDSLLPSFPQGLPEEVL
                     NRLGYRLLSVGQVSAAVTIFHRNAEAYPNSSNAYDSLGEACAAAGDTSGAIANYRRSL
                     ALDPTNQNAVRMLARLGASP"
BASE COUNT          252 a          385 c          390 g          207 t
ORIGIN      
        1 gagccagagc gcagtcagca acgtgggcgg gccgagtact actatggccc accggagaag
       61 caacacacgg tcaatgacga cgctgtacac aaaatcagta tgctgctcgg gtagagttgg
      121 ctgtctggcc gtcttcgctg ccccgaccgt gtcgagtttg ccgggctccg cggctgacac
      181 tggtctctgc gctggagccg atgtttgcca gtgtcgcatc acatcgaagg ccagcgcggc
      241 aacgatcagc ccgaaccagg ccaaccacgc tcccaccact cggtcaagag accaggaggc
      301 cagtcggcgc aatcagactc ctacgttaga gagcccgcaa cacaagatcc acgtgtgcgc
      361 tgtcctgcgg cacatcgatc ccgaagtcga gtaggaccag cgtggtatcg gaaactgtca
      421 aaccttgggc atgcgggtcc ggcctggcga aaacgaagac gcaaatgctg tcgcgggcat
      481 ctgcgccagc cagccccatg gaaaagctgc cgtcgtccag ggccgcgatg actccgtagt
      541 cctggccggc gccgccatcc gcgtgacacc caggtgccgg tgcgctgtac gcgcggacca
      601 ccgtgcccgg cacagcctct cctgttggag cggtaactcg gccatacacc agagccgttg
      661 gcggcacggg agggcaggca caaacgtcgg tgctgcatcg ggaaacagct agaatcgccg
      721 caagaagagc cagtaaccgg atgtgtttca ctctcatctt gacctctccg tgacccgagc
      781 gacccaagcg cgaacgcctg gctgtacgtc gccgccagtt tagccagctt tgtgtggaga
      841 cgatctaccg ggttatcgat ctccttaggg actcgccccc aatctagcga gcatccggac
      901 tgcgttctgg ttggtcggat cgagcgcgag tgaccggcga tagttcgcga tagctccgga
      961 ggtgtcgcct gcggcggcac acgcctcacc caggctgtcg tacgcgttgg aggagttggg
     1021 atacgcttcg gcgttccggt ggaagatggt cactgctgcg gagacttggc caaccgacag
     1081 gagccgatac cccagccgat tcagcacctc ttccggaagg ccctggggaa acgacggcag
     1141 cagagaatcg agataggcca ggccggaagc gatgccgaga ttgcggatcc gagtctccag
     1201 cgcaagccgg aggcgtcggg ttggcgcatc gaac
//
LOCUS       DASRPQ010000396         2877 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3809634, whole genome shotgun sequence.
ACCESSION   DASRPQ010000396 DASRPQ010000000
VERSION     DASRPQ010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2877
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3809634"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..196)
                     /locus_tag="VFD73_04685"
     CDS             complement(<1..196)
                     /locus_tag="VFD73_04685"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HZI73311.1"
                     /translation="MSGVDCVQALAHLDDYLKRELTPQLMVEVRQHLEDCRDCFKHAR
                     FEENFLAMLETRAARETCPQK"
     gene            complement(193..762)
                     /locus_tag="VFD73_04690"
     CDS             complement(193..762)
                     /locus_tag="VFD73_04690"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZI73312.1"
                     /translation="MAEPSAAGRTFDAEALPHLDALYRVALRLTGDTSQAEDLVQDTM
                     LKAYRSWRQYRPGTNAKGWLLTILRNTFINDYRRRKHEPVAMDLEAVEPHALDRSIQE
                     VDPEGSFFAQIVDAKVLEAIDALPEEFREVLVLSDVEGMRYAEIAEALNIPVGTVKSR
                     LFRARRQLQSELYAHAVEMGYIQPRESHT"
     gene            952..1578
                     /locus_tag="VFD73_04695"
     CDS             952..1578
                     /locus_tag="VFD73_04695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73313.1"
                     /translation="MNKPTVPALIPLSLLEAIRNLDTPVEDGLEELAEEITARRLGLS
                     PTVAAQIQRYRQAADKRGSVDLDETVSVLRLVGRRGDAHLVFADAGRRAARYASRGRG
                     RSTRTLAKLSPGGMAYRLAMRTFARLTRTIFGGELKPGAQDVEVCMDSPLSIVALPTG
                     EACVFYGSVYQELLRGLTGFEGAVIHERCRSRGDQSCVWRTAVAEVYE"
     gene            1575..2735
                     /locus_tag="VFD73_04700"
     CDS             1575..2735
                     /locus_tag="VFD73_04700"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HZI73314.1"
                     /translation="MIDRAEVQKALTEAGLDGWLLYAFRGMNPVAVRVLGLTGMNTRR
                     LFVLLPREGEPVAVAHKIELQGMESFPGKVIPYARWSELHEILGSLLQGRTVAMEISP
                     EDAVPYLDRVPYGVIELLRRAGAVVVPSGGLVSRFAASWSRSELQDHRAAAEILAGVA
                     RRSLERAVGEADQNLSETALQVRVIAEVESQGLVFDEPPIVAFGANSAKPHYHPQPGK
                     DATLRKGDVVLLDLWAGRSRETVFADQTWIGVADRAASDRIREVWDTVRHARDAAVET
                     IRQAWNEHRPVMGFEADQAARAVVERAGLGDRFVHRTGHSIDRDLHGSGPHLDDYETH
                     DDRTLVPGIGFSVEPGVYLPGEFGIRSEVNVFMGESGPEVTPRQPQTELITA"
BASE COUNT          489 a          890 c          964 g          534 t
ORIGIN      
        1 acttttgggg gcaggtctcc cgcgccgctc gcgtctccaa catcgcgagg aagttctcct
       61 cgaagcgagc gtgcttgaag cagtcccggc agtcctccag gtgctgccgc acctccacca
      121 tcagctgggg cgtcagttcc cgtttgagat agtcgtcgag gtgcgccagc gcctggacgc
      181 agtcgacgcc gctcatgtgt gactctctct cggttggata tatcccattt caaccgcgtg
      241 agcatacagc tcggattgga gctggcggcg ggcacgaaac aggcgcgact ttaccgttcc
      301 caccggaatg ttcaacgcct ctgcgatttc ggcgtaccgc atgccttcca cgtcgctcaa
      361 caccagcact tcccggaact cctccggcag cgcatcgata gcttcgagca ccttggcatc
      421 cacgatctgc gcgaagaaac tgccttcagg atcgacctcc tgaatcgagc ggtccagggc
      481 gtggggctcg acggcttcca gatccatggc gaccggctcg tgcttgcgac ggcgataatc
      541 gttgataaac gtgttgcgca ggatggtcag gagccagccc tttgcattgg taccgggacg
      601 atactggcgc cacgaccggt aggctttcag catcgtatcc tgcaccagat cctcggcctg
      661 gctggtgtcg ccggtaagcc gaagcgccac ccgatacaac gcgtccaggt ggggcagtgc
      721 ttccgcatcg aaggtgcgtc cggcagcaga cggctcagcc atgagggaat gtaggcgggt
      781 aggagggtaa gcgggtaggc gggtaagtgg taggcgaacg atgtaagcag gatgagaaca
      841 agcgccagcg gtgagagggt ggtgcctggg cctgcccact gcgtacgctc tgacacttcc
      901 cgcccatcac ccgcttacct gcttaccggc ttacccgctt actttccgcc cgtgaacaag
      961 ccgaccgttc ccgccctgat tccgctcagc ctgctggagg cgatccgaaa cctcgacact
     1021 ccagttgagg atgggctcga agagttggcc gaggagatca cggcgcgtcg gctgggtctc
     1081 agccccacgg tggcggcgca gattcagcga tatcgccagg cggcggacaa acgaggcagc
     1141 gtggatctgg acgagaccgt atcggtgctc cgactggtgg gccgccgggg agatgcgcat
     1201 ttggtcttcg ccgacgccgg acggcgcgcg gcgcgctatg cctcacgcgg gcgcggccgg
     1261 tctacccgga cgttggcgaa gctctctccc ggcggcatgg cgtaccgtct ggcgatgcga
     1321 acctttgccc ggctgacccg gaccatcttt ggcggcgagc tcaaacccgg cgctcaggac
     1381 gtggaggtgt gcatggactc accgctttcc atagttgcgt tgccgaccgg cgaggcatgc
     1441 gttttctacg gatcggtcta ccaggagctc ctgcgggggc tcaccgggtt cgaaggcgcg
     1501 gtgattcacg agcggtgccg ttcccggggc gaccagtcct gtgtatggag aactgcggtt
     1561 gcggaggtct acgaatgata gatcgggcag aggtacagaa ggcgctgacc gaggccggtc
     1621 tggatggttg gctcctgtat gccttccgcg gaatgaatcc agtggcggtg cgcgtcctcg
     1681 gcttgaccgg catgaatacc cgccggctct tcgtgctgct gccccgggaa ggcgagccag
     1741 tggcggtagc tcacaagatc gagttgcaag ggatggagag cttccccggc aaggtcattc
     1801 cgtatgcccg ctggagcgag ctccacgaga tcctcggctc ccttttgcag ggtcggaccg
     1861 tggcgatgga gatttctccc gaggacgccg tgccttacct cgatcgcgtt ccctatggag
     1921 tgatcgagct attgcggcgg gccggtgccg tggtggtgcc ctcgggtggg ctggtttccc
     1981 ggttcgctgc cagctggagc cggtccgagc tgcaggatca tcgggccgca gccgagatcc
     2041 tggccggggt ggctcgccgt tcgctggagc gtgccgtcgg cgaggcggac caaaatctga
     2101 gcgagaccgc attgcaggtc cgggtgatcg ctgaggtgga gagccagggg ctcgtgttcg
     2161 atgagccgcc catcgtcgcc ttcggagcaa actccgccaa gccacactac caccctcagc
     2221 ccggcaaaga cgcaacgctt cgaaagggag atgtcgtctt gctcgacctc tgggcgggcc
     2281 ggagcaggga gacggttttt gccgatcaga cctggatcgg ggtcgcggac cgggcagctt
     2341 ccgaccggat tcgcgaggtg tgggacacgg tgcgtcacgc ccgggatgcc gcggtggaga
     2401 ccatccggca ggcatggaac gagcatcgcc cggtcatggg cttcgaagcg gatcaggcag
     2461 cgcgcgccgt ggtcgagcgg gccggcctgg gcgatcgatt cgtgcatcgg accgggcact
     2521 cgatcgatcg ggacctccac gggtcgggcc cgcatctcga tgactacgag acccacgacg
     2581 accggacgct ggtgccgggg atcggcttct cggtcgagcc cggggtctac ctccccggcg
     2641 agttcgggat ccgcagcgaa gtgaacgtct tcatgggcga gagtggcccg gaggtcacgc
     2701 cgcggcagcc gcaaacggag ttgatcaccg cttagtcaga cgtcagacct cagctgtcgg
     2761 tcgttagcct cagccaagta tccggcgccc tcgcgcttgg taactgcgaa ggatcttcag
     2821 cgaactgacg tctgacgtct gacgactgac gtctgacccc tactccctcc cgtcaca
//
LOCUS       DASRPQ010000397         1059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_361731, whole genome shotgun sequence.
ACCESSION   DASRPQ010000397 DASRPQ010000000
VERSION     DASRPQ010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361731"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1059)
                     /locus_tag="VFD73_04705"
     CDS             complement(<1..>1059)
                     /locus_tag="VFD73_04705"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HZI73315.1"
                     /translation="TSLLLGAALVALVLFLFLADLRAAAISLTAIPLSLLAAITLLNL
                     LGFGLNTLTLGGLAIALGEVVDDAIIDVENIARRLRQNRLLADPRSPARVVLDASLEV
                     RGSVVYATFVVALVFVPVLALSGVQGALFRPLGLAYIFATLASLLVALTVTPALALML
                     LAGRERRAHESAVLAWIKGRYVGALNYLLSRPRMVLPATLGLCLAAIVTLPFLGATFL
                     PEFREGHYLIHMSAVPGTSLQESLRLGQRVTQVLRRDPRVRSVAQRIGRAELSEDTWG
                     THYTEFEVDLKPLSGEDAENIQDDLRRELSGFPGVNFAIRGFLAERIEETLTGSTADL
                     VVRVFGEDLDSLDTAAQN"
BASE COUNT          248 a          328 c          329 g          154 t
ORIGIN      
        1 cgttttgagc cgcggtgtcc aggctgtcca ggtcttctcc gaaaactcga accacgagat
       61 cggcggtgga accggtgagc gtttcctcga tccgctcagc caggaacccc cggatggcaa
      121 agttgacgcc gggaaatccg ctgagctccc ggcggagatc gtcctggatg ttctccgcat
      181 cctctccgct cagcggcttg aggtcgacct caaattcggt gtaatgggtc ccccaggtat
      241 cttcggagag ctcggcccgt cctattctct gggccaccga tcgcacccgc ggatcgcgcc
      301 ggagcacctg agtgaccctc tgtcccagcc gaagcgactc ctggagcgac gtgccgggaa
      361 ctgcggacat gtggatcaga taatgtcctt cgcggaactc cggcagaaac gttgcgccca
      421 ggaatggcaa cgtgacgatg gcagccaggc aaagcccaag ggtcgcggga agaaccatcc
      481 gaggtcgcga cagcaggtaa ttcagggccc caacatagcg gcccttaatc catgccagca
      541 cggcggattc atgcgcccga cgttcacgcc cggcgagcag catcaatgcc agagcgggag
      601 tgacggtgag cgccacgagg agagaggcga gagtcgcaaa gatgtaagcg agcccaagag
      661 gacggaacag cgctccctga actccggaga gcgcgagtac cggaacgaat accagcgcaa
      721 caacaaaggt tgcgtagacc acgctgcctc gaacctccag agaggcatcg agcacaaccc
      781 gagcggggct ccgaggatcg gccagcaaac ggttctgtcg cagccgacga gcgatgttct
      841 ccacatcgat aatggcatca tccaccacct cccccagtgc gatggccaag ccacccagag
      901 tcagggtatt gaggccgaat cccagcaggt tgagcagcgt gatggcggct agcagcgaca
      961 gcggaatggc ggtcagtgag atggcagcgg cccgcaagtc ggcaagaaac agaaacagca
     1021 ccaaggcaac cagcgcggca ccgagcaaca gcgacgtgg
//
LOCUS       DASRPQ010000398         1379 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_361756, whole genome shotgun sequence.
ACCESSION   DASRPQ010000398 DASRPQ010000000
VERSION     DASRPQ010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1379
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361756"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..608
                     /locus_tag="VFD73_04710"
     CDS             <1..608
                     /locus_tag="VFD73_04710"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HZI73316.1"
                     /translation="PAPDSRHHGATDLNAAVHTVLDFLEAQGLLRGQALEVSLDEGLP
                     PVRGDQHLLEQVIVNLVVNACQASPGGRVVVGTRAKAIGTQRRITTRQGDSKYHWPDP
                     GRRWAPEPRPRELEPGTRGVMLFVADDGPGVSEADRERVFDPFFTTKDPGQGTGLGLA
                     IVARTIYESGGTVWVDRAREGGAVFKAFLPIASEIDAAADR"
     gene            589..>1379
                     /locus_tag="VFD73_04715"
     CDS             589..>1379
                     /locus_tag="VFD73_04715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HZI73317.1"
                     /translation="MRLLIVDDDAGFRQSLALLLGESGYAVEAEGDPERALSRALAEE
                     FDLILCDVKMPGMDGLSFLRRYRDQSGNALIIMMSAYGDEDAALAAMREGAYDYLQKP
                     FKPDEVILTVKKAEERERMRRELDALRSSLGVGAVGDLVVSQSRGMRDVVELAARVAR
                     HNTTVLITGESGTGKEVIARAIHRMSPRNERSFTAINCAAIPEQLLESELFGHTKGAF
                     TGATSDHPGLFELSNGGTLLLDEIADLPQSLQAKLLRVLEEGEIRR"
BASE COUNT          250 a          424 c          480 g          225 t
ORIGIN      
        1 aacccgcgcc cgacagccgg caccatggcg ccaccgacct gaatgccgcg gtccacacgg
       61 tgctcgactt tctggaagca cagggactgc tgcggggaca ggcactggaa gtctcgctcg
      121 acgaggggct cccgccggtt cgaggcgatc agcacctgct ggagcaggtc atcgtcaatc
      181 tggtggtgaa cgcctgtcag gcgagcccag gtggacgggt ggtagtgggc actcgcgcca
      241 aggccatcgg cactcagcgg cggatcacga cgagacaggg cgacagcaag tatcactggc
      301 ccgatccggg acgaaggtgg gcaccggagc cgcggccgcg tgagctggaa ccggggacga
      361 gaggggtcat gctcttcgtt gccgatgacg ggcccggggt gtcggaggcg gatcgggagc
      421 gggtgttcga tcccttcttc acgaccaagg atccgggaca gggaacgggg cttggactgg
      481 cgatcgtcgc ccggacgatt tacgagagcg gcggtacggt ctgggtagac cgagcgagag
      541 aaggtggggc ggtgttcaag gcatttctcc caatcgcgag tgagatcgat gcggctgctg
      601 atcgttgacg acgacgcggg tttccggcaa tcgctcgcgc tgctgctcgg cgagtccggc
      661 tatgccgttg aggccgaggg cgacccggag cgggcgctct cccgcgcact ggccgaggag
      721 ttcgacctca tcctctgtga cgtaaagatg cccggcatgg acgggctcag cttcctgcgc
      781 cgctaccgcg atcagagcgg caatgccctg atcatcatga tgagcgccta tggtgacgaa
      841 gacgctgccc tcgctgccat gcgtgagggt gcgtacgact acctgcagaa gccgttcaag
      901 ccggatgaag tcatcctgac ggtgaaaaag gcggaggagc gggaacgcat gcgccgtgag
      961 ctcgacgcgc tgcgctccag tctcggggta ggcgccgttg gtgatctggt ggtttcccag
     1021 agccggggga tgcgcgacgt ggtcgagctc gcggcccggg tggcgcgcca caacaccacg
     1081 gtgctgatca ccggtgagag cggaaccggc aaagaggtca tcgcccgcgc cattcaccgg
     1141 atgagccctc gcaacgagcg cagcttcacc gcgatcaact gcgcagccat ccccgaacag
     1201 ctgctggagt cggagctctt tggtcacacc aagggcgcct ttaccggtgc cacctccgat
     1261 catccagggc tcttcgagct gtccaacggc ggcaccctgc tgctcgacga gattgccgat
     1321 cttccccagt cgctccaggc caaactcctc cgggtgctcg aagaaggtga gatccgccg
//
LOCUS       DASRPQ010000399         1107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_672514, whole genome shotgun sequence.
ACCESSION   DASRPQ010000399 DASRPQ010000000
VERSION     DASRPQ010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_672514"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..869
                     /locus_tag="VFD73_04720"
     CDS             <1..869
                     /locus_tag="VFD73_04720"
                     /inference="COORDINATES: protein motif:HMM:NF024644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HZI73318.1"
                     /translation="DTATSMRSIVEGIDKSGFSRDEPWRLTGSSLPEHETFFFYLQRI
                     CNHCTYPGCLAACPRKAIYKRPEDGIVLIDQNRCRGYKKCVEQCPFKKPMYRGTTRVS
                     EKCIACYPRIEGKDPLTGGEPMETRCMAACVGKIRMQSLVRIGEDGLWAEDRWHPLYY
                     TIRVEQVALPLYPQWGTEPNGFYIPPRHSPRGYARQMFGPGVDNAIEKYLVPSRELLA
                     VLQLWRASQQIVFRYDVIPGPKVFETQIHGKRFEMYNDTVLGFNKSGKEVARIQVEEP
                     IYVRPAERVNWL"
BASE COUNT          210 a          332 c          361 g          204 t
ORIGIN      
        1 aggacaccgc gacctcgatg cgctccatcg tggagggtat cgacaaatcc ggcttctcgc
       61 gggatgaacc gtggcggctc accggcagca gcctgccgga gcatgagacg ttcttcttct
      121 acctgcagcg gatctgtaac cactgtacgt acccggggtg cctcgcggcc tgtccgcgca
      181 aggcgatcta caagcggccg gaagacggca tcgtgctgat cgaccagaac cgctgccgcg
      241 ggtacaagaa gtgcgtggag cagtgcccgt tcaagaagcc gatgtaccgg ggcacgaccc
      301 gggtgtcgga aaagtgcatc gcgtgctatc cgcggatcga ggggaaggat ccgctgacgg
      361 gcggcgaacc gatggaaacg cgctgtatgg cggcctgcgt gggcaagatc cgcatgcaga
      421 gcctggtgcg catcggcgag gacggcctgt gggcggaaga ccggtggcat cccctgtact
      481 acaccattcg ggtggaacag gtggcgctgc ccctctatcc gcagtggggc accgagccca
      541 acggcttcta cattccgcca cggcacagcc cccgcggcta tgctcggcag atgttcggcc
      601 cgggcgtcga caatgcgatc gagaagtacc tcgtgcccag ccgcgaactg ttggccgtcc
      661 tccagctctg gagagccagc cagcagatcg tcttccggta cgacgtcatt ccgggtccga
      721 aagtgttcga aacccagatc cacgggaagc ggttcgagat gtacaacgac accgtgctgg
      781 gcttcaacaa gtcgggcaag gaagtggcgc gtatccaggt cgaagagccg atctatgttc
      841 ggccggccga gcgcgtgaac tggctgtaat acgcagctag gatcgcttca cgaaggggca
      901 gggttcccga agggaccctg ccccttctgt ttccaccggt cttttgcctc agggcctatg
      961 ctgcttctgc gcgcttgacg ggttatgggg ggtccagtag agttgtcgca tgtttcacgg
     1021 ccttccatga ggtgcgggca gcgtgacctc cggtcaagac cagtcaattc catttgcggc
     1081 gcaggcgata ccgttcgaag agttcct
//
LOCUS       DASRPQ010000400         1695 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_45632, whole genome shotgun sequence.
ACCESSION   DASRPQ010000400 DASRPQ010000000
VERSION     DASRPQ010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45632"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..348)
                     /locus_tag="VFD73_04725"
     CDS             complement(<1..348)
                     /locus_tag="VFD73_04725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73319.1"
                     /translation="MCWRWALPGFASTNWENDSGFLPAVMAMLAGPSVAGLLLTALLD
                     GRPGLRAVLSCLLRWRVGAEWYAVALLPAPLLATGTLALQSIGAPIYTAPDKPAVLLS
                     GLMAGFSVVFEELG"
     gene            complement(456..1448)
                     /locus_tag="VFD73_04730"
     CDS             complement(456..1448)
                     /locus_tag="VFD73_04730"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI73320.1"
                     /translation="MKHAGRTEPFRGPDGKIVPGSIAEIEYLTLGGLDQWVMIRGESL
                     NNPPLILLSGGPGLSEAPFFRHCNAPLEKTFTLVYWDQRGSGKSFDRRTPRSSMTLEQ
                     FISDLTELVEAVCRRVGQKKVVIFGHSWGSALGVLYAARHPDRVSAYVGSGQIGDWPA
                     GEAASYAFALRELQRLNRRKGVEKLRAIGPPPYPAKSLWTQRIWLNRIEGHLTPASLW
                     KVERMLLGGPEFSIFDQPNVVRGFRFSLDAMWDEVSRLNLLQLVPALTMPVFFFLGRQ
                     DHWVPPETSVAYFEALTAPSKKLVWFEQSGHEPFVDEPVKFNESMVQLVRPVVV"
BASE COUNT          356 a          545 c          519 g          275 t
ORIGIN      
        1 gccgagctct tcgaagacga cgctgaagcc ggccatcagg ccggagagca gaacggcagg
       61 cttatctggc gccgtataga tcggcgcgcc gatcgactgc agagcgagag ttcccgtcgc
      121 cagcagcggc gccggcagga gcgcgaccgc gtaccactcg gcacccactc gccaccgcag
      181 caggcaggac aacaccgctc gcaggccggg ccgtccgtcg agcaaggcgg tcaggagaag
      241 cccggccacg ctgggacccg cgagcatggc catcacggcg gggaggaatc cggagtcgtt
      301 ctcccagttg gtgctggcga accccggcag ggcccagcgc cagcacaaag ccgccccagg
      361 agatcgcgaa cgtgagggcg aaataggccg ggagcggatg ccgctggatg aaagctttga
      421 tggccgacat gagaccgttc gcccggcaat tagcttcaga ccacaaccgg ccgcaccaac
      481 tgcaccatcg attcattgaa cttgaccggc tcatcgacga acggctcatg tccggactgc
      541 tcgaaccaaa cgagtttctt cgagggcgcg gtcaacgcct cgaaataggc cacactggtc
      601 tccggcggta cccagtggtc ctggcggccc agaaagaaga agaccggcat ggttaaggcg
      661 ggcacgagct gcagcagatt cagccgggac acctcgtccc acatcgcgtc gagtgaaaac
      721 cgaaacccgc gcaccacatt gggctgatcg aagatcgaga attcaggtcc gccgagaagc
      781 atccgctcca ccttccacaa gctggccgga gtgaggtggc cctcgatgcg attcagccag
      841 atgcgctggg tccacaagct tttcgcgggg tagggcgggg gtccgatcgc ccgcaacttt
      901 tccacccctt tacgccggtt gaggcgctgc agctcgcgga gcgcaaaggc atacgaagcc
      961 gcctccccgg caggccagtc gccgatttgt ccgctgccca cgtaggctga cactctgtcc
     1021 gggtggcgtg cggcgtagag cacgcccaga gcagagcccc aggaatgccc gaagatcacc
     1081 accttcttct gccccactcg ccgacagacc gcttccacca gctccgtcag atcgctgatg
     1141 aactgctcca gcgtcatgga ggatcgaggg gtccggcggt cgaatgattt gccgctgccg
     1201 cgctggtccc agtagaccaa cgtgaaggtc ttctccagcg gcgcattgca gtggcgaaag
     1261 aacggcgcct cggaaaggcc ggggccgccg gacaggagga tgagcggagg attgttgagg
     1321 ctctcgcccc gaatcatgac ccactgatcc aggcctccca gcgtgagata ctcgatctcg
     1381 gcgatgctgc cgggaacgat cttgccgtcc gggccacgaa atggctccgt cctgcccgca
     1441 tgcttcacag acgctctcct gctttggtcg ttcaaagagt cagagaatgc gatacctcca
     1501 ctatagagcg tctgtctgaa ggactacgcg agatcatcat gaagaagatc tcatcctgaa
     1561 ctccggtccg cttcgaggtg ccggtcctag tctcataccc attgaatgag ttggggacag
     1621 actgtcgcga gcagcacttc aacaccggag gaatcatgct catcgaacgc tatctgcccc
     1681 gctatgacgt gagcg
//
LOCUS       DASRPQ010000401         1014 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_985819, whole genome shotgun sequence.
ACCESSION   DASRPQ010000401 DASRPQ010000000
VERSION     DASRPQ010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_985819"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1014
                     /locus_tag="VFD73_04735"
     CDS             <1..>1014
                     /locus_tag="VFD73_04735"
                     /inference="COORDINATES: protein motif:HMM:NF017964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HZI73321.1"
                     /translation="RDTMISLEGLTLTTGRHDEAGYILRTFADYVRDGLIPNLFPEGE
                     QEGLYHTADATLWFFHALDRYLDLTGDQTTLRLVLPKLLDIVEHHLRGTHFGIRVDPQ
                     DGLLCQGQEGYQLTWMDAKVGDWVVTPRRGKAVEINALWYNALRLLEGWVRAEQDEPT
                     AQRLAEHAALAYQSFNDRFWYAAGGYLYDVVDGEQGDDPACRPNQVLAISLRHAVLAP
                     ARWQPVLTVVQQRLLTPVGLRSLAPGHPDYKARYDGDLRARDAAYHQGTVWAWLIGPF
                     IDAWLKVYPEDYPGARRFLHGFEAHLSEACIGSISEIFDAEEPFTPSGCVAQAWSVAE
                     VLRC"
BASE COUNT          176 a          334 c          308 g          196 t
ORIGIN      
        1 cgcgatacca tgatcagtct ggagggcctc accctcacca cgggacgcca cgacgaagcc
       61 ggctatattc tccgcacgtt cgcggactat gtgcgtgacg gtcttattcc caacctgttc
      121 ccggagggcg aacaggaagg cctgtatcat acggccgatg ccacgctctg gttttttcat
      181 gccctggatc gctacctcga cctaacggga gatcagacca cgctccgact cgtactcccc
      241 aagctgctcg acattgtcga gcaccatctg cgcggcacgc acttcggcat tcgggtggat
      301 ccgcaggacg gcctgttgtg ccagggacag gaaggctacc agctgacctg gatggacgcc
      361 aaggtcggcg attgggtcgt cacgccgcgg cggggcaaag cggttgagat caatgcgctc
      421 tggtataacg ctctgcggtt gttggaaggt tgggtacgcg ccgaacagga tgagccaaca
      481 gcgcaacgtc tggccgagca cgccgcgcta gcctaccagt ccttcaatga ccgcttctgg
      541 tacgctgccg gtgggtacct gtacgatgtc gttgacggcg agcagggtga cgaccccgcc
      601 tgccggccca atcaggtcct ggccatctcc ctgcgtcatg ccgttcttgc cccagcacgc
      661 tggcagccgg tgctcacagt cgtccagcag cgtctgctca cgcccgtggg cctgcgctcg
      721 ctggcgcctg gccatcccga ctacaaggcc cgctacgacg gtgacttgcg agcccgcgac
      781 gcggcctatc accagggaac tgtctgggcc tggctcatag gtccctttat tgacgcctgg
      841 ctcaaggtct accccgagga ctaccctgga gcccggcgct tcctgcacgg ctttgaggcc
      901 cacctcagcg aagcctgtat tggctccatc agcgagatct tcgatgccga agagccgttt
      961 acgcccagtg gctgcgtggc gcaggcctgg agcgtagccg aagtgctacg gtgc
//
LOCUS       DASRPQ010000402         1072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_985854, whole genome shotgun sequence.
ACCESSION   DASRPQ010000402 DASRPQ010000000
VERSION     DASRPQ010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_985854"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..505
                     /locus_tag="VFD73_04740"
     CDS             <1..505
                     /locus_tag="VFD73_04740"
                     /inference="COORDINATES: protein motif:HMM:NF012720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HZI73322.1"
                     /translation="GSTLFICVVTYFYLRRNFATWPPEHIYRPSLVIPSIQAALMLLS
                     NIPMRAVDRASSRLDLAGVRSGMVICSVLSVIMCVLRALELKALNVRWDTNAYGSVAW
                     ATLVAHSTLLLLETAETLAITALMFQPDVEARDLSGVSDNALYWYFLTGVWIPLYVMV
                     FLSPYFM"
     gene            531..905
                     /locus_tag="VFD73_04745"
     CDS             531..905
                     /locus_tag="VFD73_04745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73323.1"
                     /translation="MTVDPRTPVPDAPEIRALWAGMLLAPTAFLLNLELAYAVVPHAC
                     SSQNRLPVHLVHLVCLVIALVGGLFALRSWRSCGETWPGEEGGPVSRSRFMAGLGLLL
                     SVLFALVIVAQWIPSFVLSPCQ"
BASE COUNT          153 a          351 c          331 g          237 t
ORIGIN      
        1 ggggtccacc ctcttcatct gcgtggtgac ctacttctat ctgcgccgga acttcgccac
       61 ctggccgccg gagcacatct accggccatc gctggtgatc ccctcgattc aggcagcgct
      121 catgctgctc agcaacattc ccatgcgcgc ggtcgatcga gcttccagcc gtctggatct
      181 tgcgggcgtg cggagcggca tggtgatctg ttcggtgttg agcgtgatca tgtgcgtgct
      241 ccgcgccctc gagctcaagg cgctgaacgt ccgctgggat accaatgcct acgggtcagt
      301 ggcgtgggcc acgctggtgg ctcactcaac gctgctgctg ctcgagacgg cggagacgct
      361 ggccatcacc gcgttgatgt tccagcccga tgtcgaggcg cgggatcttt ccggcgtcag
      421 cgacaacgcc ctgtactggt acttcctgac tggggtgtgg attccgttgt atgtgatggt
      481 gttcctgtcg ccttacttca tgtaggcgaa caacccggtt cccggcttct atgaccgtcg
      541 atccccgcac cccagtgccc gacgccccgg agatcagagc tctctgggcg ggaatgctgc
      601 tcgcacctac ggcattcctc ctgaatctgg agctggcgta cgcggtggtg ccgcacgcct
      661 gttcctccca aaatcggctg ccggtccacc tggtccatct ggtatgtctc gtcatcgcgc
      721 tggtcggcgg cttgttcgcg cttcggtcat ggaggtcctg cggcgagacc tggcctggtg
      781 aagagggcgg acctgtgagc cggagccggt tcatggcggg cctcggtctc ctgctgagcg
      841 ttctctttgc gctggtgatc gtcgcccaat ggatcccaag cttcgtgttg agtccatgcc
      901 agtgagaggc ggtaggagcg gaaggagcgg aagaagcgga acgctagtat ccgcctgtac
      961 cgcctttacc gcccttaccg cctctaccgc ctttaccgcc cttaccggct cctccgccta
     1021 cgccctcgac ggcagacctg tcgcgccacc cgagctctgg cgtgcctgga gc
//
LOCUS       DASRPQ010000403         1671 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_986110, whole genome shotgun sequence.
ACCESSION   DASRPQ010000403 DASRPQ010000000
VERSION     DASRPQ010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_986110"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..296)
                     /locus_tag="VFD73_04750"
     CDS             complement(<1..296)
                     /locus_tag="VFD73_04750"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZI73324.1"
                     /translation="MGSPMYRQIAEDLREQIESGAIRPGQQLRTELELRDHYGASRNT
                     VRDAIKWLTTLGLVQTKPGQGTFVVRKIKPFVTTLTADPNNPGGDKVVGPSGGT"
     gene            698..916
                     /locus_tag="VFD73_04755"
     CDS             698..916
                     /locus_tag="VFD73_04755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73325.1"
                     /translation="MAGFVAVVAAALFLAVLVGLGVVAVAVRREDRRFTLVGDAPDML
                     SRSARRLNGVGRRDLDPEFLRPVGELVH"
BASE COUNT          273 a          535 c          552 g          311 t
ORIGIN      
        1 taggtgccgc cgctcggtcc gacgaccttg tcgccgcccg gattattcgg gtcggcagtc
       61 aaagtggtga cgaaaggctt aatcttgcgc actacgaacg tgccctggcc cggcttggtc
      121 tgcactaggc caagcgtggt aagccacttg atcgcgtccc ggaccgtgtt ccgcgaggct
      181 ccgtagtgat ctcgtagctc gagttcggtc cgcagctgct ggccgggcct gatcgctccc
      241 gactcgatct gctcgcgcag atcttcggcg atctgccggt acatcggact acccatcggc
      301 cctcctctcc gctcgacctt cctctggttg gggtgatcct acctgtccgg accacccatg
      361 ccatccgacc gagcagaata tttggcattg atgggtttat acccgcccaa cgttggtaac
      421 acctggaaga gataccagag gttgggatgg ctcggatggc agggtgcata ggatctatcc
      481 tagcagtccg actgcttggt tgcactagga cctccccaat gggtctagcc agtggaacag
      541 tcagactcaa cgggacttac ctgagcgcac gtacagatcg tggacacacg gggacgccgt
      601 ggcccgcgag cactaggccg gcggacacgc gccggaccag gttgcaccta gttggacccc
      661 gcggatgtaa cgcgggacga aagtgctgga ggccatcatg gccggtttcg tagccgtagt
      721 agcagccgct ctcttcctgg ccgtcctggt aggactgggc gtagtggcgg tcgcggtccg
      781 ccgcgaggac cggcggttca cgctggtggg cgacgcgcct gacatgctct cccgcagtgc
      841 ccggcggctg aacggcgtgg gccgcaggga ccttgacccg gagttcctcc ggcccgtggg
      901 cgagctcgtc cactagggcg attgcgactc gctgaccagc atctttacca agggatacga
      961 cgatcgttac cggtctggct ggccatggcg ctccggctct ccggttctcc gcgggccggc
     1021 cggcccggac cgtggccggg taacatccgg cccggcgagg ccaggccctg cacccgcgac
     1081 tgtggacatc ggatgcccgg ccccacgcgg ttgccagggt gcctgacccc gcatcgggcg
     1141 gccggtcggc ccgggcccgg cgcctagggc tggccgggcg cggagccccg gatgtccggg
     1201 gaccggagac ccgcggggcc ggcgttggca ccccgttcca cgggctcggt tcgcatatgc
     1261 cagccatccc aatcactggg ctggctaggt ctggtggaat catcctcgct atcggaatgt
     1321 aagccatctg agatggtttc gaggccttaa gggtcgggta ttcagcccac atgtaccaaa
     1381 tgttgggatc gccaggacga tcggtaagag cctggctatc cggctgcttg gtcatagaag
     1441 tacaggccat accaccccta ctggaccgat ggttcgcctc agcccagtag atcggatggt
     1501 gggcggagcg tacgggacga tgacgaccct cgcgcactga ctccggagac tctccggggc
     1561 cgcaccaaca gtagggcccg gcggttcccg caccgccggc aggttctggg gaggctgcaa
     1621 tgagcggcag cggagcatca gtagcgtact tgatcctggc gacgttcttc g
//
LOCUS       DASRPQ010000404         1186 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_986116, whole genome shotgun sequence.
ACCESSION   DASRPQ010000404 DASRPQ010000000
VERSION     DASRPQ010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_986116"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            150..488
                     /locus_tag="VFD73_04760"
     CDS             150..488
                     /locus_tag="VFD73_04760"
                     /inference="COORDINATES: protein motif:HMM:TIGR04529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophore-related protein"
                     /protein_id="HZI73326.1"
                     /translation="MTESWLTRFTVAAGGLALSLTAGAGVASAAPDLGPAINTTCTYD
                     QLVAALNVEDPDVATFFNADPAMQAGLRDFLAGSPSQRRQTAQEIVSNPHSQPYLDSL
                     QRTFATCHNY"
     gene            complement(529..>1186)
                     /locus_tag="VFD73_04765"
     CDS             complement(529..>1186)
                     /locus_tag="VFD73_04765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73327.1"
                     /translation="AMFLAGGVMFTLTLLIGVYVQDILGYSTLRAGVAFIPFAVAVGV
                     GAGVSSRLVMSLPPRVVVIIGGLIVLGAVLYASTLHQGVPYFPNLVLPLVISGIGIGV
                     INVPLALSLIASVGLDQIGPISAISLMLSRLGGPMVLAFIQGVITWRTLQLGGTTGPV
                     KSMNAAQLHALDHGYTYGLQWLAGVALLVCGVALLIGYSAQQVAHAAEVKKAYDLGEL
                     "
BASE COUNT          241 a          391 c          345 g          209 t
ORIGIN      
        1 aatcttcata ccccattcga gtgccgttgt cagcgacatc aggcccgagc cgtgctcgtc
       61 cctatggact atttctgagg tttgcttacc ccactactcg agctgcatgt ttgcgttaga
      121 gtcggcgccg tcagggaagg agtccacgca tgactgaatc gtggttgacc agatttactg
      181 tggcggctgg tggtctggcg ttgtcgttga ccgctggggc cggggtcgcg tccgcagccc
      241 ccgatctagg tcctgccatc aacacgacct gcacttacga ccagctcgtg gcagcactga
      301 acgtggaaga tccggatgtt gccacctttt tcaacgccga tccggcgatg caggccgggc
      361 tgcgtgactt tctcgccggg tcacccagtc aacggaggca aactgcccag gagatagtga
      421 gcaatccaca tagccagccc tacctcgaca gtctccaacg gaccttcgct acttgtcaca
      481 actactgagc cgcggccgac ccagtgttct tgtgcccgtt ggttttagct acagttcccc
      541 caagtcgtag gccttcttga cctccgccgc atgcgctacc tgctgcgcac tgtagccgat
      601 gagcaacgcg accccacaga ccagcaaggc caccccggcc agccactgca ggccgtaggt
      661 gtagccgtgg tccagtgcat gcaactgggc ggcgttcatt gacttcactg gcccggtggt
      721 gccgccaagt tgcagtgtgc gccaggtgat gacgccctgg ataaaggcca gcaccatcgg
      781 cccgccgagg cgggacagca tgagcgagat cgccgatata ggcccaatct ggtccaaacc
      841 gacgctggcg atcagcgaga gcgcgagcgg cacattgatc acgccgattc cgataccgga
      901 gatgacgagg ggcagcacca gattcgggaa gtacggcact ccctggtgga gcgtcgaggc
      961 gtacagcacc gcgcccagca cgattaagcc gccgatgatc accaccacgc gcggcggcaa
     1021 cgacatcacc aaccgcgacg acacgcccgc cccgacgccc accgcgacgg cgaacgggat
     1081 gaatgccacg cccgcgcgca gcgtgctgta gccgaggatg tcctgtacat acacgccgat
     1141 cagcagcgtc agggtgaaca taaccccacc ggccagaaac atggcc
//
LOCUS       DASRPQ010000405         1160 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1934426, whole genome shotgun sequence.
ACCESSION   DASRPQ010000405 DASRPQ010000000
VERSION     DASRPQ010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1934426"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..343
                     /locus_tag="VFD73_04770"
     CDS             <1..343
                     /locus_tag="VFD73_04770"
                     /inference="COORDINATES: protein motif:HMM:TIGR00149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HZI73328.1"
                     /translation="QRLVRDSGIQTGILTVQMIGSTGGMTTIEYESGALNDLRQALER
                     VAPVTEEYAHNVRWGDGNGFSHVRSAILKTSLSIPVIQGNLALGTWQQVVAINLDNRD
                     RMRELVAVLVG"
     gene            340..>1160
                     /locus_tag="VFD73_04775"
     CDS             340..>1160
                     /locus_tag="VFD73_04775"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HZI73329.1"
                     /translation="MRSFLLGVCITAIAVPGLAGQSPIRADTGLAVPMRDGVVLRADL
                     YRPVEPGKFPALVYRTPYDRTDTVGGSAFIHAAVRRGYAVLLQDVRGRYGSGGVFEAY
                     RQEGPDGYDTIEWAARQPWCNGSVGTYGLSYPAAVQWLAALEHPPSLKAMVPAMTFST
                     PESFWYQGGVWDGSWLDWTWLNIAPDLRRRLGVAGPRTDEDAARSWDRDGPAARRYRP
                     MLELPDFKGVASWYYDWMRHPPGDKYWDFARLPGRYERIDAAVLNLSGWFDEAYGP"
BASE COUNT          199 a          357 c          387 g          217 t
ORIGIN      
        1 gcaacggctg gtccgcgatt ccggcattca aactggaatc ctgacggtgc agatgatcgg
       61 ttcgaccggc ggcatgacga cgatcgaata cgaatcaggg gcgctgaacg acctgcgcca
      121 ggctctggag cgggtcgctc cagtaactga ggaatacgct cacaatgtac gctggggaga
      181 cgggaacggc ttctctcatg tcaggagcgc aatcctcaag accagcctct ccattccggt
      241 gatccaagga aatctcgcgc tgggcacctg gcagcaggtg gtcgccatca atctcgacaa
      301 ccgagaccgg atgcgagagc tggttgcggt gctggtcgga tgagatcgtt cctcctcggt
      361 gtatgcatca cagcgattgc ggtacccggt ctcgccggtc agagcccgat tcgagccgac
      421 accggcctcg cagtcccgat gcgggacggg gtcgtgctcc gggccgatct ctatcgtcct
      481 gtcgaaccgg gaaagttccc ggcgctggtc taccgcacgc catacgaccg aaccgataca
      541 gtcggagggt cggcgttcat ccatgccgct gtcaggcgcg gctacgccgt cctccttcag
      601 gatgtgcgcg gtcggtacgg ctcgggcggg gtgttcgaag cctatcgtca ggaaggacca
      661 gatggctacg acacgatcga gtgggcggcg cggcagccgt ggtgcaatgg gtccgtcggg
      721 acatatggtc tctcctatcc cgctgcggtg cagtggctcg ctgcgctcga gcatccgccg
      781 tcgctcaagg cgatggtgcc cgcgatgacg ttctccacgc cggagagctt ctggtatcag
      841 ggtggagtct gggacggatc gtggctggac tggacctggc tcaacatcgc tcccgatctc
      901 cggcggcgcc tcggcgttgc cggaccgcgc accgacgagg atgcggcgag atcgtgggat
      961 cgcgacggac ctgccgcccg gcggtaccgg ccgatgctcg agctgcctga cttcaaaggc
     1021 gtggcttcct ggtactacga ctggatgcgc catccgccgg gcgacaagta ttgggacttt
     1081 gcccgacttc ccgggcgcta cgagcggatc gatgcagcgg tgctcaacct ctccggttgg
     1141 ttcgacgagg catacggtcc
//
LOCUS       DASRPQ010000406         4285 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1934498, whole genome shotgun sequence.
ACCESSION   DASRPQ010000406 DASRPQ010000000
VERSION     DASRPQ010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4285
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1934498"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..560
                     /locus_tag="VFD73_04780"
     CDS             <1..560
                     /locus_tag="VFD73_04780"
                     /inference="COORDINATES: protein motif:HMM:NF012800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73330.1"
                     /translation="AMKHLADVRKQLAVPTIMNLIGPLANPAGVLRQVIGVADPSRGP
                     LLAHALAVLGIRHALVLHAAVGMDEISPSGRTSVWEVREGKTSTWELNPADFGLECDD
                     LDGLAGAEPAENASTIAALLAGKASTALRCAVLLNAAAAMYVAGRGWSLEEALARGRD
                     ALDSGAAAAVLERLRAAAPAVSTSG"
     gene            complement(544..1152)
                     /gene="lexA"
                     /locus_tag="VFD73_04785"
     CDS             complement(544..1152)
                     /gene="lexA"
                     /locus_tag="VFD73_04785"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: protein motif:HMM:TIGR00498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HZI73331.1"
                     /translation="MPLTKRQSEILTYLQTHINGQGYAPSFEEIAEHFGFQSLATVHE
                     HLTNLERKGYIRRSYNESRSIEVLPPRGTSSASEIPLLGKVAAGTPIESLMHQESISV
                     PEQMLPRRGPNYALKVQGTSMIDEHIVDGDIVVVHGKQSAENGEMVIALVNGSEATVK
                     KFYREPGGWIRLQPANSTMQPMRFQERDVLIQGVVVGVIRKY"
     gene            1227..2018
                     /gene="trpC"
                     /locus_tag="VFD73_04790"
     CDS             1227..2018
                     /gene="trpC"
                     /locus_tag="VFD73_04790"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: protein motif:HMM:NF001377.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HZI73332.1"
                     /translation="MPVSLHQIIETTRSRLPALQARRAALERDILRETLARPSFRAAL
                     RRPQVSVIAEIKRRSPSVGAIREDLDPGARAALYAANGASAISVLTDTPYFGGSLEDL
                     REAARQCALPPLRKDFILDEVQVLEARAAGASAVLLIVRVLGRERLEQLLCFAQELGL
                     DALVEVHDRRELDIALELDAAVVGVNSRDLDTFAIDVDSALRLVGPIPGDRIAVAESG
                     LHGANDVALAAAAGVDAVLIGTALSSAESPEQLMRELSAVPRRGR"
     gene            2008..2652
                     /locus_tag="VFD73_04795"
     CDS             2008..2652
                     /locus_tag="VFD73_04795"
                     /inference="COORDINATES: protein motif:HMM:NF012900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HZI73333.1"
                     /translation="MAVKIKFCGLMRPRDVDRAVQVGAAYLGVVFAEGPRTVTPGLVS
                     ELIRASAGVPVFGVFAEHRVEEILQISEQTGLRGAQLHGRYSPSDAERLRAAGLEVWR
                     VVRIAAPLDLDALSSAVLGSHAVLVEPKVPHALGGSGIPLEYTVARQARVRLASHPMV
                     LAGGLTAENVAEAMERVRPDIVDVSSGVEAGPGAKDHAKLARFAEAVFAYSPII"
     gene            2630..3832
                     /gene="trpB"
                     /locus_tag="VFD73_04800"
     CDS             2630..3832
                     /gene="trpB"
                     /locus_tag="VFD73_04800"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HZI73334.1"
                     /translation="MPIVQSSERAVSGRFGPYGGRYVPETLVAALDELAALYDSVRAD
                     PAFWSDLQRLLAEFVGRPSPLTEAPRLSQAVGARVVLKREDLNHTGAHKINNTVGQAL
                     LALRMGKRRIIAETGAGQHGVATATVCARFNLECVVYMGAEDMERQRLNVYRMQLLGA
                     TVVPVESGTRTLKDATNEALRDWVTNVPTTHYIIGSVVGPDPFPRMVRDFQSVIGREA
                     REQILERYAGLPHTVVACVGGGSNAIGIFSGFLDDREVRLVGVEAAGEGISTGHHSAT
                     LSAGTPGVLHGSLSYLLQDADGQVSPAHSISAGLDYPGVGPEHSYLRDTGRVRYQAAT
                     DAEALDAFQELSRLEGIIPALETAHALAWVRRSAGSFPADAIVLICLSGRGDKDVAHV
                     AAALGIRL"
     gene            3829..>4285
                     /locus_tag="VFD73_04805"
     CDS             3829..>4285
                     /locus_tag="VFD73_04805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73335.1"
                     /translation="MTAQPQTATLPVSQVADLIAVMAKALRAFQMYLPNNPIYQRAVK
                     NVQAACPPIWASVEEVVLKVTETEFVWEEQVVYHQPNKSDSLSWSLFKDGMRALTIRR
                     GAEEVDLPHLLTVINKARFLPADAGDDLPTLLWEHEFEYIEFRFIDFFSG"
BASE COUNT          710 a         1313 c         1434 g          828 t
ORIGIN      
        1 ccgcgatgaa acatctggcc gacgttcgaa agcagcttgc ggtgcccacc atcatgaacc
       61 tgatcggacc gctggcaaat ccggcaggag ttcttcgcca ggtcatcggc gttgccgatc
      121 cctcgcgagg gccgctgctg gcccacgctc tggccgtgct gggaattcgg cacgcgctag
      181 tgctccatgc cgcagtggga atggatgaaa tcagtccgtc ggggcgaacc tcggtttggg
      241 aggtcaggga agggaaaacc agcacctggg aattgaaccc ggcggatttc gggctggagt
      301 gtgatgacct cgacgggctg gccggcgcgg aaccggcgga gaacgcgagc actattgccg
      361 cgctgctggc cgggaaggcc agcaccgcgc tccggtgcgc ggtgctgctc aacgcggcag
      421 cggcgatgta cgtggcgggg cgagggtggt cgctggagga ggcgctggct cgaggtcggg
      481 atgcgctgga tagcggggct gcggccgcgg tgctcgagcg attgcgagcc gcagccccgg
      541 cggtcagtac ttccggatga ctcctacaac cacgccctgg atgaggacat ctcgctcctg
      601 gaagcgcatg ggctgcatgg tcgaattggc cggctgcagt ctgatccagc cgccgggctc
      661 gcggtagaac ttcttcaccg tggcctcgct gccgttgacc agggcgataa ccatctcgcc
      721 gttctcggcc gattgcttac cgtggaccac cacgatgtcg ccgtcgacga tatgctcgtc
      781 gatcatcgag gtgccctgca ccttcagggc gtaattcggg ccgcgccgcg ggagcatctg
      841 ctccggtacg gagatgcttt cctgatgcat caaggattcg atcggagtgc cggcggcgac
      901 tttgcccagc agggggattt cgctggcgga cgaggtgccc cgcggtggga gtacctcgat
      961 ggaacggctc tcgttgtagg agcggcggat atagcccttg cgctccaggt tggtgagatg
     1021 ctcgtggact gttgccagag attgaaaccc gaaatgctcg gcgatttcct cgaagctggg
     1081 ggcgtagccc tgaccattga tgtgagtctg taggtaggtc aggatttcac tctggcgttt
     1141 ggtcagcggc atccgtgtct ccgtgcgtga cgttgtgacc gaatagagcc cgaactaagg
     1201 tacccgaaca ccggccgaag gacaagatgc cagttagcct gcatcagatc atcgagacca
     1261 cccgaagccg gcttcccgcc cttcaagcgc gccgggcggc gctggaacgg gatattctga
     1321 gagagaccct ggcccgtcct tccttccgcg ccgctctccg cagaccccaa gtctcggtca
     1381 tcgcggagat caagcgtcgc tccccatcgg ttggagcaat tcgtgaagat ctcgatcctg
     1441 gggcccgggc cgcgctctac gcggcaaacg gggcatcggc gatctcggta ctgaccgata
     1501 ctccttattt cgggggttct ctggaggacc tgcgggaggc tgctcgccag tgtgcgctcc
     1561 ctcccttgcg caaggacttc attctggacg aggtccaggt gctggaggcc agagctgccg
     1621 gggcatcggc cgttctcctg attgtcaggg tgctcggacg ggaacgtctg gagcagcttc
     1681 tttgctttgc tcaagagctc ggcctcgacg cactggtcga ggttcacgat cggcgtgagc
     1741 tcgatatcgc cctcgagctg gatgcagccg tcgttggggt gaacagccgt gatctcgata
     1801 ctttcgcgat cgatgtcgat tccgcgttgc ggttggtcgg ccctatcccg ggcgatcgca
     1861 tcgccgtcgc agagagcggc ttgcatggag ccaacgatgt ggcgctcgcg gcggcggctg
     1921 gagtggatgc ggtgttgatc gggacggcgc tctcttccgc agagtcgccg gagcagctca
     1981 tgcgcgagct ttccgcggtg cctcgccgtg gccgttaaga tcaaattctg tgggctgatg
     2041 cggccccgcg acgtggatcg cgcggtccag gtgggtgcgg cctatctggg cgttgttttt
     2101 gctgaaggac ccaggacggt tacccccggc ctcgtttctg agctcatcag agccagtgcc
     2161 ggtgttcctg tcttcggggt ttttgccgaa cacagggtgg aggaaatcct ccagatctct
     2221 gagcagacag ggcttagggg agcccagttg catggccggt attccccctc ggatgcggag
     2281 cggctccggg cggcggggtt ggaggtctgg cgcgtcgtgc gaatcgcggc gccgctggat
     2341 ctggatgcct tgagttctgc tgttcttgga tctcacgcag tcctggttga gccaaaggta
     2401 ccgcacgccc taggcggctc tggaatcccc ctcgagtaca cggttgccag gcaggctcga
     2461 gtccgtctgg caagccaccc aatggtcctg gccggtggcc tcactgccga gaacgtcgct
     2521 gaagccatgg agcgggtgcg gcccgacatc gtggatgtga gttccggtgt cgaagccggc
     2581 cctggcgcca aggatcacgc gaaacttgcc cgatttgcgg aggcggtctt tgcctatagt
     2641 ccaatcatct gagcgggcag tctccggccg cttcggaccg tacggcggcc gctatgtccc
     2701 cgagacgttg gtggccgcgc tggacgaatt ggccgcgctg tacgattccg tccgggcaga
     2761 tccggccttc tggtcggatc tccagcgcct gctcgccgag tttgtaggcc gaccgtctcc
     2821 actcaccgag gctccgcgtc tcagccaggc cgtgggggcc cgcgtggtgc tgaagcggga
     2881 agacctgaac cacaccggcg ctcacaagat caacaacacc gttggtcagg ccttgctggc
     2941 cctgcgcatg ggcaagcgca gaatcatcgc ggaaaccggc gccggccagc acggagtagc
     3001 tactgccacg gtatgcgccc gcttcaacct ggagtgcgtg gtctacatgg gcgccgaaga
     3061 catggagcgc cagcggttga acgtttaccg gatgcagctg ctgggtgcca ccgtggtgcc
     3121 ggtcgagtcc ggcacccgca cgctcaaaga tgccaccaac gaggcgctcc gagactgggt
     3181 gaccaatgtg ccgaccaccc actacatcat cggctcggtg gtggggcccg acccgttccc
     3241 gcgcatggtg cgcgacttcc agtcggtgat cgggcgagag gctcgcgaac agatactcga
     3301 gcgctatgcc gggctgccgc atacggtggt tgcctgtgtc gggggtggct ccaacgccat
     3361 cggcatcttc agcggcttcc tcgacgatcg tgaggtcagg ttggtcggag tcgaggctgc
     3421 gggagagggc atctccaccg gtcatcatag cgccacgttg agcgcaggca cgccaggggt
     3481 gcttcacgga agcctgagtt acctgctgca ggacgccgac ggccaggtgt ccccggcgca
     3541 ctcgatctcc gcgggactcg attaccccgg cgttggcccc gagcatagct acctcagaga
     3601 taccggccga gtccgctacc aggctgcgac cgacgccgag gcgctcgatg catttcagga
     3661 gctctcccgc ctcgaaggga tcatccctgc gctggaaacg gcccacgcgc tcgcctgggt
     3721 ccggcgcagc gctggaagct ttcctgccga cgcaatcgtc ttgatctgtt tgagcgggcg
     3781 cggcgacaaa gatgtcgccc acgttgcggc agcgctcggg attcggctgt gacggcgcag
     3841 ccccagacag ccacgttacc ggtctcccag gtcgccgacc tgatcgcggt gatggccaag
     3901 gccctccgcg catttcagat gtatttgccg aacaatccga tctatcagcg cgcggtcaag
     3961 aacgtgcagg cggcctgccc acccatctgg gcgtctgtcg aggaagtggt gctgaaggtg
     4021 accgagaccg agttcgtctg ggaggagcag gtggtctacc atcagcccaa caagagcgac
     4081 agcctgagct ggagtctgtt caaggacgga atgcgtgctc tgaccatccg gcggggcgcg
     4141 gaggaggtgg acctgccgca tctcctcacc gtcatcaaca aagcccgctt tctgcccgct
     4201 gacgccgggg acgatctccc cactctactt tgggagcacg agttcgagta catcgagttt
     4261 cgattcatcg acttcttcag cggtg
//
LOCUS       DASRPQ010000407         1744 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2867096, whole genome shotgun sequence.
ACCESSION   DASRPQ010000407 DASRPQ010000000
VERSION     DASRPQ010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1744
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2867096"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1647)
                     /locus_tag="VFD73_04810"
     CDS             complement(<1..1647)
                     /locus_tag="VFD73_04810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HZI73336.1"
                     /translation="MAERLTLPVLPLREVVLFPGVTAPIGAGRPATLRAIEAALAGSD
                     RLVFAVSQRQNVESVTSDALYTIGTIARIGQLQRGLSGMQLLLNGERRGIAIHYSEHD
                     GYLQAIVREAEEMLPLKDDDPAFVALHREARARATELGQKSGLPDEVVQQVLAGVNEP
                     GRFADLVAGYIDITPPQRQMLLETLSVEERLRRVLVHMQRQIGVLDAQEDIKSQVQEE
                     LGERQREMFLREQLKTIQRELGEGDERDDLQELKDRLATLDLPPEARKEVDREFGRLA
                     RIGRESMESQVIRTFLENIAELPWNERSKEHLDLPEAQRILDEDHYALGDVKDRVLEF
                     LAVRQLREQAEAAEKPEGAEPAEERAEQKAEEVAAGESTDAPQATATVPAPNAPIKGN
                     EDDRVAKGPILLFVGPPGVGKTSVAKSIARAMGRKYVRISLGGARDEADIRGHRRTYV
                     GAMPGRIIQGMKQAGTRNPVFLLDEVDKLGVSFQGDPASALLEVLDPAQNDTFVDHYL
                     GVPFDLSEVLFIATANFIQNIPSPLLDRMEVVEFAGYTERE"
BASE COUNT          311 a          588 c          503 g          342 t
ORIGIN      
        1 ctctcgctcg gtgtagccgg cgaactcgac gacttccatc cggtcgagca gcgggctcgg
       61 gatgttctgg atgaagtttg ccgtggcgat gaacagcact tcactcagat cgaacggcac
      121 acccagatag tgatcgacaa atgtgtcgtt ctgagccgga tccagcacct cgagcagcgc
      181 actcgccgga tcgccctgga aagagacgcc cagcttgtcg acttcatcca gcaggaagac
      241 agggttcctg gtgccagcct gcttcattcc ctggatgatc cgcccgggca tggccccgac
      301 gtaggtccgc cgatgacccc ggatatccgc ctcgtctcgc gcaccgccca atgaaatccg
      361 gacgtacttc cgccccatgg cccgggcaat cgacttggca accgaggtct taccaacacc
      421 cggaggaccc acgaacaata ggattggccc ctttgcgacg cggtcatcct cgttgccttt
      481 gatcggggca ttcggagcgg gaaccgtcgc ggttgcctga ggcgcatcgg tcgactcacc
      541 tgccgcaacc tcctcagcct tctgctcggc ccgctcttcc gccggttccg ctccttcggg
      601 cttttccgcc gcttccgcct gctccctcaa ctgccgtacg gcgagaaact ccagcactcg
      661 atcctttacg tcgcccaggg cgtagtgatc ctcgtcgagg atacgctgtg cctccggcag
      721 gtcgagatgc tctttgctcc gctcgttcca gggcagctcg gcgatgtttt ccaggaacgt
      781 ccggatgacc tgagactcca tggactcccg gccaatccgg gccagccggc cgaactcacg
      841 gtcgacttcc tttcgtgcct ccggcggtag gtccagcgta gccagacgat ccttcagctc
      901 ctgcagatca tcccgctcgt caccctcgcc gagctcgcgc tgaatggtct tcagctgctc
      961 gcgcaggaac atctcccgtt gacgctcgcc cagctcctcc tgcacctggg acttgatgtc
     1021 ttcctgagca tcgaggactc cgatctgccg ctgcatgtgc accagcaccc ggcgaagccg
     1081 ctcctcgaca ctcagcgttt ccagcaacat ttggcgctgg ggtggggtga tgtcgatata
     1141 accggcgacc agatcggcga agcgcccagg ctcgtttact ccagccagaa cctgttgcac
     1201 cacctcgtcc ggcaggcctg atttctggcc gagctcggtg gcgcgggcgc gagcctcacg
     1261 gtgcagcgct acgaatgccg ggtcatcgtc cttcagagga agcatctcct cggcctcgcg
     1321 gacgatggcc tggagatagc catcgtgttc gctatagtgg atagctatgc cccggcgctc
     1381 gccattgagc agcagctgca tcccggaaag gccgcgttga agctgcccga tcctggcgat
     1441 cgtaccgatg gtataaagtg cgtctgaagt gacgctttcc acgttctgcc gttgcgagac
     1501 cgcgaacacc aggcggtcag atccggccag ggcggcctcg atggcccgca gcgtcgctgg
     1561 ccggccggct ccaatcggag cagtgacgcc cggaaaaagg acgacctcgc gcagaggaag
     1621 aacgggtaat gtcaaacgtt cggccattac ttggcactcc ttaggggccc cactcaaggg
     1681 gcaaaatgac agtcctgcag acgaatcgag cggtgaggtg caccgaccgt gccactcttt
     1741 tgca
//
LOCUS       DASRPQ010000408         1126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1934930, whole genome shotgun sequence.
ACCESSION   DASRPQ010000408 DASRPQ010000000
VERSION     DASRPQ010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1934930"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(403..657)
                     /locus_tag="VFD73_04815"
     CDS             complement(403..657)
                     /locus_tag="VFD73_04815"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HZI73337.1"
                     /translation="MIVMAVDWANFVAHRGATPVYVQLANWIEDQIKAGNLAPGDQIP
                     SQREMRDLTGHSMETAGKAMTLLREHELVETSTIGTFVKR"
     gene            873..>1126
                     /locus_tag="VFD73_04820"
     CDS             873..>1126
                     /locus_tag="VFD73_04820"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI73338.1"
                     /translation="MNADASNPALHFGSEVKRARIAAGMTLAELGRVVGYHKSQISRV
                     ERGVRAPTRKFAQMCDLAFPGRGGWFLRFYEDSRQWSAMPP"
BASE COUNT          197 a          356 c          362 g          211 t
ORIGIN      
        1 ccgcgccagt tggccaccgt gcggaccgat acggtcaggt gctccgcgaa tgactcgttg
       61 gacatgcgga aggcttgccg gagcagatcc gcgcggccac cggaccacgt cgcgattacc
      121 tgcatacgcg gctaccggag aagcagtctg cgcacgtggg cttggcgccg gccgcatcgg
      181 cgtcttgccc atctggacgc gcgcggacgc ggtcaacgaa cgcccgcaca ctggcgggtg
      241 tgagtgtcat atggcgcgct gcccgttccc tttggtcgct cgcctattac caacagcgtg
      301 tccaacttct cacactacgg agtaatacgg gcgggaaacg tcatgggttc accaggcaga
      361 cctgggagtc ttgcgagcca agtacctgcc cggttcggac tttcagcgct tgacgaacgt
      421 cccgatggtc gaggtctcga ccaactcgtg ttcccggagg agcgtcatgg ccttgccggc
      481 cgtctccatg gagtggccgg tcaggtctct catctcccgc tgactaggga tctggtctcc
      541 gggtgcaagg ttgccagcct tgatctggtc ctcgatccag ttggctagct ggacatacac
      601 cggcgtagcg ccacggtgcg ccacgaagtt tgcccagtcc acagccataa cgatcatggt
      661 aagacaatgc cagatcatgc cttgctagcc agaacaaggc atgacaatgc atagcactgg
      721 catgtagcct aaagatgctc ctcggcaggg tcgttcggtc gcttgcttcg gcttgcattc
      781 cgttcccgcg accctgccga ggagcacccc agcccgtgct tgcgtcgcgc gaggcagggg
      841 tcctatcgcc gcgtagcgcg aggtatgcac cgatgaacgc tgacgcgagc aaccccgcgc
      901 tgcacttcgg cagcgaggtc aagcgggcca ggatcgcggc gggcatgacg ctggccgagc
      961 tggggcgagt ggtcgggtac cacaaaagcc agatctcgcg ggttgagcgc ggcgtccgcg
     1021 caccgaccag gaagttcgcg cagatgtgcg acctggcgtt tcctggccgc ggtggctggt
     1081 ttctccgttt ctacgaggac agccgacagt ggtcagcgat gccgcc
//
LOCUS       DASRPQ010000409         3187 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_46502, whole genome shotgun sequence.
ACCESSION   DASRPQ010000409 DASRPQ010000000
VERSION     DASRPQ010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3187
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46502"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..487)
                     /locus_tag="VFD73_04825"
     CDS             complement(<1..487)
                     /locus_tag="VFD73_04825"
                     /inference="COORDINATES: protein motif:HMM:NF023853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase III"
                     /protein_id="HZI73339.1"
                     /translation="MTTRSSLTVEASPPVTTIPRSLNGGTMSAAERIDSIFGSDIFSR
                     SMMRQRLPKEVYRSLLRTIDRGEPLDPAVADVVAASMKDWAIENGATHYTHWFQPLTG
                     LTAEKHDSLAAPDGAGGVVFNFSGSELVQGEPDASSFPSGGLRATFEARGYTAWDATS
                     PA"
     gene            complement(493..1488)
                     /gene="cysK"
                     /locus_tag="VFD73_04830"
     CDS             complement(493..1488)
                     /gene="cysK"
                     /locus_tag="VFD73_04830"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: protein motif:HMM:TIGR01136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HZI73340.1"
                     /translation="MAHGRIYQDVSETVGNTPLIRLNRLTAGLPGKIAIKHEGYNPYD
                     SVKDRIGAAMINDAVEKGRLRPGMVIVEPTSGNTGIGLAYVAAARGYRCIFTMPDTMT
                     VERRNLLRAVGAKVVLTEGAKGMKGAMARAEEILSRLGNRAWMPRQFDNPANPAIHYR
                     TTGPEIWEDTKGAVDVFVSGVGTGGTITGAGHFLREKKPGIKIVAVEPAESPVLSGGQ
                     HSPHRQQGIGAGFVPSILDTKVYDEIIRVTSEDAIATARRMAREEAIFAGISSGSITW
                     AALQVAKRPESAGKLIVSIVCDFGERYLSNPVYTELPDPDFSDLEDALAPPVAVG"
     gene            complement(1568..2557)
                     /locus_tag="VFD73_04835"
     CDS             complement(1568..2557)
                     /locus_tag="VFD73_04835"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF015692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HZI73341.1"
                     /translation="MIRDQLAGLILGQALGDAVGFVVEAEPPEVATQYVEQFLRTGRA
                     SERSHPHYPFGQYSDDTQLARELLRSFHESGRWDPAAFAARLAQLFRDRRDVGAGKGT
                     RSAALRLLMGVPWSESGTAAPYAGNGSAMRAGPLGLLFENLSDVTRAARQQSRITHLD
                     PRCAAGAAVLACAVWHASKREPIDRSALIAALAECAEVDDRSVAEAIRGLADWISLSP
                     ADAARHVHQGGLDPAHPRWHGISAFVTPSLLWSLYAFLRSPDDYWETICTAVGVAGDT
                     DTMAAMAGAISGARAGVSGLPGDMLSYLTDQGEWGARDLTELAHSCADLLRRQ"
     gene            complement(2554..>3187)
                     /locus_tag="VFD73_04840"
     CDS             complement(2554..>3187)
                     /locus_tag="VFD73_04840"
                     /inference="COORDINATES: protein motif:HMM:NF015648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HZI73342.1"
                     /translation="GGVPYFPAMSYLDDHLLDGEQIVYRAHLHWTIFGSAIFVVLLGV
                     ALAIVLRIYQPEYWWLGLILVGIGLLLAIGPAIRYNSSEFAVTNKRVLAKHGFIERES
                     IETLLTKIEAISVDQRIMGRIFGYGTIIITGTGGTEESFPHISAPLEFRRQIQGQVVA
                     LEERRGPPAGEALSQPDTSRVERDCPYCAERILARARVCKHCGREVTPVA"
BASE COUNT          561 a         1034 c         1038 g          554 t
ORIGIN      
        1 aggcgggact ggtggcatcc cacgcggtat agccgcgggc ctcgaacgtt gcccggagtc
       61 cccctgaagg aaagctcgac gcgtcgggct cgccttggac cagctccgag cccgaaaagt
      121 tgaacaccac cccgccggcg ccgtcaggag cggccagcga gtcgtgcttc tccgcggtca
      181 acccggtgag cggctggaac cagtgggtgt agtgggttgc gccgttctcg atggcccagt
      241 ccttcatcga cgccgccacc acatcggcga cggccgggtc gagcggctct ccccggtcga
      301 tcgtccggag taggctccga tacacctctt ttgggagccg ctgccgcatc atgctgcggg
      361 agaaaatgtc gctgccgaag atgctgtcga tgcgctctgc ggcactcatg gtgccgccgt
      421 tcagcgagcg tgggatggtg gtcacggggg gtgatgcctc gacggtaaga gatgaacggg
      481 tggtcatgct ggtcagccca ccgcgaccgg aggagcgagc gcgtcctcga gatcggagaa
      541 gtcgggatcg ggcagttccg tgtagaccgg gttcgacaga tagcgctcgc cgaaatcaca
      601 gacgatcgac acgatcagct tgccggcact ctccggccgc ttggccacct ggagcgcggc
      661 ccaagtgatc gagccgctgg aaatgccggc aaagatcgcc tcttcccggg ccatccggcg
      721 cgcggtcgcg atggcatcct cactggtcac ccggatgatt tcgtcgtaca ccttggtatc
      781 cagaatcgaa ggcacaaacc cggcaccgat tccctgctgc cggtggggtg aatgctgtcc
      841 cccggataag accggactct ctgcgggctc gaccgcaacg attttgatgc ccggcttctt
      901 ttccctgagg aagtgacctg cgccggtaat ggtgcctccg gtcccgacgc cagacacgaa
      961 gacgtccacg gcgcctttgg tgtcttccca gatctcaggg ccggtggtgc ggtagtgaat
     1021 tgccggattg gccggattat cgaactgccg cggcatccag gcccggttgc ccagccgcga
     1081 cagaatctcc tcggcgcggg ccatggcgcc tttcattccc ttggcaccct cggtcagcac
     1141 caccttggct cccacagcgc ggaggagatt ccgccgctca acggtcatgg tatcgggcat
     1201 ggtaaagatg cagcgatagc cccgtgcggc cgccacgtac gccaggccga ttccggtgtt
     1261 gccgctggtg ggctccacga tcaccatgcc gggacggagc cggcccttct cgaccgcatc
     1321 gttgatcatg gcggcgccga tccggtcctt gaccgaatcg tatgggttat agccctcgtg
     1381 ctttatcgcg attttgccgg ggagtcccgc ggtcagccga ttgagtcgga tcaggggagt
     1441 gtttccaact gtctcgctga cgtcctgata gatcctgccg tgtgccatgg gttgacctca
     1501 aaccggtgga gtgccatgag cccagagttc gaccgtgatg ggcagaataa ataatagaag
     1561 gcgaccacta ctgcctcctc aggaggtcgg cgcaggaatg ggctagctcg gtaaggtcgc
     1621 gggcgcccca ttcaccctgg tcggtcagat agctgagcat gtcgccgggc agcccggaga
     1681 cgccggctcg ggcgccgctg atcgcaccgg ccatcgctgc catagtgtcg gtgtcaccgg
     1741 caacgcctac ggcggtgcag atcgtctccc aatagtcgtc gggagaccga agaaaggcat
     1801 agagactcca caacagactg ggagtcacga acgccgagat gccgtgccag cggggatgag
     1861 cgggatcgag accaccctgg tgcacatggc gcgccgcatc tgcaggtgag agcgagatcc
     1921 aatccgccaa tccccggatc gcctccgcca cggagcgatc gtccacctcg gcgcactcgg
     1981 cgagcgctgc gatcagggcg gagcgatcga tcggctcacg tttagaggcg tgccacaccg
     2041 cgcaagcgag cactgccgcg cccgccgcac accggggatc gagatgcgtg atcctgctct
     2101 gctgtcgggc cgctcgggtg acgtcgctca agttctcgaa cagcaggccg agcggtcctg
     2161 cccgcatggc gctcccgttt cctgcgtagg gcgcggccgt tcccgattcc gaccacggta
     2221 ctcccatcag caggcggagg gccgccgacc gcgtcccctt ccctgcgccc acgtcccgac
     2281 gatcgcggaa cagctgcgcc agccgggccg caaacgccgc cggatcccac cggccggatt
     2341 cgtggaagct ccgcagcagc tcgcgggcga gctgggtgtc gtcgctgtat tgcccgaagg
     2401 gatagtgcgg gtgggagcgc tccgacgcgc gcccggtgcg gaggaactgc tcgacgtact
     2461 gagtggccac ttcggggggc tcggcctcga ccacgaaccc gactgcgtca cccagggcct
     2521 gccccaggat caggcccgcc aactggtcgc gaatcacgcc acgggggtca cttcccgtcc
     2581 gcagtgtttg catacccggg cacgcgccag gatccgctcg gcgcaatagg ggcagtctcg
     2641 ctcgactcgc gaagtatcag gttggctcag tgcctcgccc gcgggtggtc cccgtcgctc
     2701 ttccagggca accacctggc cctggatctg gcggcgaaac tcgagcgggg ccgagatgtg
     2761 cggaaacgac tcctcggttc cgccggtgcc ggtaatgatg atcgttccgt acccaaagat
     2821 ccttcccatg attcgctggt cgacggagat cgcctcgatc ttcgtcaaca gcgtctcgat
     2881 ggactcacgc tcgatgaagc cgtgcttggc cagcacccgc ttgttggtga ccgcgaattc
     2941 ggagctgttg taccggatcg cggggccgat cgcgagcagg agtccgatgc cgaccaggat
     3001 cagccccagc caccagtatt ccggctgata gatccgcagg acgatggcga gcgcgacacc
     3061 aagcagtacg acgaaaatgg cggagccgaa gatggtccaa tggaggtgcg cccggtaaac
     3121 gatctgctca ccgtcgagga gatggtcgtc gaggtagctc atggcaggaa aatagggcac
     3181 tccaccg
//
LOCUS       DASRPQ010000410         2059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4434703, whole genome shotgun sequence.
ACCESSION   DASRPQ010000410 DASRPQ010000000
VERSION     DASRPQ010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4434703"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(103..852)
                     /locus_tag="VFD73_04845"
     CDS             complement(103..852)
                     /locus_tag="VFD73_04845"
                     /inference="COORDINATES: protein motif:HMM:NF037084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73343.1"
                     /translation="MGSSASIAWPNTVLNTIVAESLDYVAGELEAALGAKPSAAKLES
                     AVVAVLKQIIHRHKRVIFDGDNYSEEWHAEAERRGLPNLKDSVAAFGVLRDKKNAELF
                     RKYGVLTQAELDSRTHIAVEKYIKQLGIEAETMVSMARNQIFPAALQHQQRMAEAVGA
                     TKAAGVECADTIAALRSFVDVVNRLGTATSAVERAAAHHDGDPMKHASQISRELKPAM
                     AELRNVVDTLETLVAADLWPLPTYRDLLFLK"
     gene            complement(892..>2059)
                     /locus_tag="VFD73_04850"
     CDS             complement(892..>2059)
                     /locus_tag="VFD73_04850"
                     /inference="COORDINATES: protein motif:HMM:NF012348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamine synthetase III"
                     /protein_id="HZI73344.1"
                     /translation="DWAIENGASHYTHWFQPLTGQTAEKHDSLAAPDGNGGVVFNFSG
                     SELVQGEPDASSFPSGGLRATFEARGYTAWDATSPAFLMRGENNVTLCIPTAFVSWTG
                     EALDTKIPLLRSVEALSKQALRILKMFGTDQGVSRIVTTVGPEQEYFLVDRELFYQRP
                     DLLTCERTLFGAKPPKGQQLEDHYFGTIPPRVLAFMAEAERELYWLGVPVKTRHNEVA
                     PGQYEIAPLFEPSHIASDHQMLLMETLKRVAPRYGLQALLHEKPFAGVNGSGKHNNWS
                     MSTDTGVNLLDPQDETHTNMQFLVFLCATIRAVDLHADLLRASIASAANDHRLGANEA
                     PPAIISIFLGKMLGDILEQIEAGLPKRTIKGGILDLGAKTLPQLPRHSGDRNRT"
BASE COUNT          355 a          652 c          647 g          405 t
ORIGIN      
        1 cgttaccaaa ttcgcgcaga tacaagccat tgtgagttgt agtccgtggc cagcaagacg
       61 tccacgactg agaactgacg actgacgtct gacgactgac gtctacttca aaaacaacaa
      121 atccctatac gtcggcagcg gccagagatc cgccgccacc agcgtctcca gcgtgtccac
      181 cacgttcctg agctccgcca tggccggctt cagctctcgg ctgatctgac tcgcgtgctt
      241 catcgggtcg ccgtcgtgat gggcggcggc acgctcgacc gcactcgtgg cggtgccgag
      301 ccggtttacc acatcgacga agcttcggag cgcggcaatg gtgtcggcac actccacccc
      361 ggccgccttg gtggctccaa ccgcctccgc catccgctgc tggtgctgca gcgcggcggg
      421 aaaaatctga ttgcgggcca tcgacaccat cgtctcggcc tcgatgccga gctgcttgat
      481 gtatttctcc accgcgatgt gggttcgtga atcgagctcc gcctgggtca gcaccccata
      541 cttccggaac agctccgcat ttttcttgtc gcgcagcaca ccgaatgcgg caaccgaatc
      601 tttgaggttg ggcagcccac ggcgctccgc ctcggcgtgc cattcctcgg aatagttgtc
      661 gccatcgaag atgacccgct tatggcgatg gatgatctgc ttgagcaccg ccaccaccgc
      721 cgattccagc ttggccgcgc tcggcttcgc gccgagtgcc gcctcgagct ctcccgcgac
      781 atagtcgagc gattcggcga caatggtgtt gaggaccgta ttgggccacg caatgctggc
      841 gctggagccc accgcccgga actcgaactt gtttcccgtg aaggcgaacg gctaggtgcg
      901 gttgcggtcg ccggaatggc ggggcagctg cggcagcgtt ttggcaccga gatcgagtat
      961 ccctcccttg atcgttcgtt taggaagccc ggcttcgatc tgctccagga tgtcgcccag
     1021 catcttgccc aggaagatcg agatgattgc gggcggcgct tcgttggcgc cgagccggtg
     1081 atcgttggcc gccgacgcaa tcgaggcccg caagagatcg gcatgtagat cgaccgcccg
     1141 aatggtggcg cagagaaaca ccaggaactg catgttggtg tgcgtctcgt cctggggatc
     1201 gagcaggttg acgcccgtgt cggtcgacat cgaccagttg ttgtgcttgc ccgagccgtt
     1261 cactccagcg aacggctttt catgcagcaa tgcctgcagt ccgtatcgcg gagccactcg
     1321 cttgagtgtc tccatcaaca gcatctggtg atcgctggcg atgtgactcg gctcgaacag
     1381 cggggcgatc tcgtactgtc ccggggcgac ttcgttgtgc ctggttttga ccgggacacc
     1441 cagccagtag agctctcgct ccgcctctgc catgaacgcc agcacccggg gaggaatggt
     1501 gccgaagtag tggtcctcca gctgctggcc cttcggcggc ttggcaccga agagcgtgcg
     1561 ctcgcaagtc agcaagtccg gccgttggta gaagagctcg cggtcgacca ggaagtactc
     1621 ctgctccggg cccacggtgg tgacgatgcg ggagactccc tggtcggtgc cgaacatctt
     1681 gagtatccgg agcgcctgct tggagagcgc ctcgaccgag cggagcagcg ggatcttggt
     1741 gtccagcgct tcgccggtcc aggagacgaa cgccgtcgga atgcagaggg tgacgttgtt
     1801 ctctcctcgc atgagaaagg cgggactggt ggcatcccac gcggtatagc cgcgggcctc
     1861 gaacgttgcc cggagtcccc ctgagggaaa gctcgacgcg tcaggctcgc cctggaccag
     1921 ctccgacccg gagaagttga ataccacgcc accgttcccg tccggcgcgg ccagcgagtc
     1981 gtgcttctcg gcagtctgac cggtcagcgg ctggaaccag tgggtgtagt ggctggcgcc
     2041 gttctcgatg gcccagtcc
//
LOCUS       DASRPQ010000411         1277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_987480, whole genome shotgun sequence.
ACCESSION   DASRPQ010000411 DASRPQ010000000
VERSION     DASRPQ010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_987480"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            267..611
                     /locus_tag="VFD73_04855"
     CDS             267..611
                     /locus_tag="VFD73_04855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73345.1"
                     /translation="MKRVLLLAAAALTLTAFVPEQADAQGRRFGVRGGVVRDPVIVGR
                     GPVHAYPRGYYGYRRGYYGPGLGAAVGLGILGGAALGAAAAAPYYGDPCLRQQQVIDA
                     WGYARWTYVRVC"
     gene            complement(748..1032)
                     /locus_tag="VFD73_04860"
     CDS             complement(748..1032)
                     /locus_tag="VFD73_04860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73346.1"
                     /translation="MRCYYNLVSSHHTITDEEGLEVADMEEAHTFAREAVRQMAQDGV
                     AEIAHWRGWQMEARDASGAVLFTVGFEASLVEDQATEASANETHAYDKAA"
BASE COUNT          196 a          388 c          430 g          263 t
ORIGIN      
        1 agccatgttc tggagttcga ctatggggcg cgctttgagg tgatctatga ccgggagggc
       61 agccccgttg acttcagggc tgaccgggtg cgcttcgagc ttctggcggg ccacatcgtc
      121 gtcagcggcg cgtcgtcacg acagctcgat taactctgct gccgtgttgc aggggtagcg
      181 aggtatgccg caggctgccc ttgtcctatg gtcgccagga gaccggcaca gaccggcgtg
      241 gggcgatgcg accggagacc ctcctgatga aacgagttct gcttcttgcc gcggctgccc
      301 tgaccctgac ggcctttgtg ccggagcaag ccgatgctca aggccgccgt ttcggtgtgc
      361 ggggcggcgt ggtgcgcgac cccgtgatcg tcgggcgggg gccggtccac gcctatccgc
      421 gcggctacta cgggtaccgg cgcggctact acggtcctgg cttgggcgcg gcggtgggct
      481 tagggatcct cggcggggcc gctctcggtg cggcagcggc ggcaccctac tacggcgacc
      541 cgtgcttgcg tcagcagcag gtcattgacg cgtggggcta cgcccgctgg acttacgttc
      601 gcgtgtgctg attgagatgg gctgctgaag cacaggatta cgggtaacgc agtccagagg
      661 tgccaagccc ctcaccgagg ttcctcggga ggggctttcg tttttcaggc gcagtctgtt
      721 gggccgagcg gccacactcc gggtcggtca agccgctttg tcgtaagcgt gggtctcgtt
      781 cgcggaggcc tcagtggctt ggtcctccac gagcgaggct tcaaagccga ctgtgaacag
      841 gacagctccc gaggcatctc gggcctccat ctgccacccc cgccagtggg cgatttccgc
      901 aacgccgtcc tgagccatct gcctgaccgc ttcgcgggcg aacgtgtgcg cctcttccat
      961 gtcggccacc tcgagaccct cctcgtcggt gatggtgtgg tgcgagctaa cgaggttgta
     1021 gtagcagcgc atggtctctc cctcaggtga acgctcggca tcagcgggga ttccctcacc
     1081 cctggagccg agggcgggaa aacttccggg tgaatgtgtc aacaagaagt taacgcgctt
     1141 gggccgcttt gaagcgacat gcgatgggct tcatctgaca agtaatgcca agctttcgtg
     1201 acatggaggg cagtttagcg gcccagctct gtcatgatgc ttcagcatat cccgcatgac
     1261 tcctggtcat gctccac
//
LOCUS       DASRPQ010000412         3165 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_674164, whole genome shotgun sequence.
ACCESSION   DASRPQ010000412 DASRPQ010000000
VERSION     DASRPQ010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3165
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_674164"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..348
                     /gene="rpsD"
                     /locus_tag="VFD73_04865"
     CDS             <1..348
                     /gene="rpsD"
                     /locus_tag="VFD73_04865"
                     /inference="COORDINATES: protein motif:HMM:NF003717.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HZI73347.1"
                     /translation="RLLQLLELRLDAVVLRAGFVRTIYAARQAVSHGHVTVNGKRVDR
                     PSYRLRPGDVVALAQKSRDLAAFTVPLEVARPPAYLELDKDARSVRVREIPEREQIPV
                     QCEASLVIEYYSR"
     gene            623..1057
                     /locus_tag="VFD73_04870"
     CDS             623..1057
                     /locus_tag="VFD73_04870"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI73348.1"
                     /translation="MSVPPATATILVVDDEISLRHILARQLRSQGYTVLEAGYGLEAL
                     EVARNSPDPVDLVLSDIVMPGMIGTELAQRLLAEHPGIQVVLMSAHIVDELARPDRWN
                     VPVLQKPLEGKKVLAIVQSMLSTPEPHRAGETLIPLSPQPPT"
     gene            1057..1452
                     /locus_tag="VFD73_04875"
     CDS             1057..1452
                     /locus_tag="VFD73_04875"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZI73349.1"
                     /translation="MTDNLLAARQYLTAIQSGATGDQLARFFAADVMQQEFPNRLNPE
                     GASRGLSEILEGAERGQKLLRSQRYEIIREVTSGENVALEVQWTGTLSIPFGGLPPGG
                     VLRARFAVFLDYRDGKIVQQRNYDCFDPW"
     gene            complement(1428..1622)
                     /locus_tag="VFD73_04880"
     CDS             complement(1428..1622)
                     /locus_tag="VFD73_04880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73350.1"
                     /translation="MIVEHVDTVAIMAAIIYAGRTGESAQAPNEKVFGVIAKAAWDLH
                     KAVAAAGEAHPSAHQGSKQS"
     gene            complement(1728..2276)
                     /locus_tag="VFD73_04885"
     CDS             complement(1728..2276)
                     /locus_tag="VFD73_04885"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HZI73351.1"
                     /translation="MHRPLRSAGYLAALALLAAGCGHKTQPEMPEPVSQDAAAPEVET
                     PATPTRATEPIAAKGLDQSQRAILEERISFDFDKSDLSAEARQKLSAKAEILRQLGNL
                     SMRVEGHADERGSDEYNLALSNRRAATAMRYLLSQGIAQDRLESVGYGEERPLDSAEN
                     EAAWAKNRRDEFQVSSGPLAQQ"
     gene            2501..>3165
                     /locus_tag="VFD73_04890"
     CDS             2501..>3165
                     /locus_tag="VFD73_04890"
                     /inference="COORDINATES: protein motif:HMM:NF012348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase"
                     /protein_id="HZI73352.1"
                     /translation="MIDLKALESRIRDGSIDTVISAITDLQGRLMGKRVTGDFFLEQA
                     HHGTHLCTYLLGTDMEMRTPAGYRLMSWETGYGDYLAAPDWSTLRIIPWLEKTALVLA
                     DVKDEATGTLVPVAPRTVLRQQVERARQMGFEALMASELEFYLLRDSYEGAARKNFHD
                     LEPFGWYNEDYHLLQASKAEPLYRRFRNEMSAAGIPVEFSKGEAAPGQHEVNIHYADA
                     LVSA"
BASE COUNT          577 a          972 c          985 g          631 t
ORIGIN      
        1 agactgcttc agctgctcga gctccggctc gatgcagttg tgcttcgtgc cggcttcgtg
       61 cggaccatct acgccgccag acaggcggtg agtcacgggc acgttaccgt aaacggcaaa
      121 cgcgtcgacc gcccgtcgta ccggctccgg cccggtgacg ttgtcgcgtt agcccagaag
      181 agccgcgatc tggctgcctt taccgttccc ctcgaagtgg cgcgtccgcc cgcctacctc
      241 gagctggaca aggatgcccg cagcgttcgg gtccgggaga ttccggagcg ggagcagatt
      301 cccgttcaat gcgaggcctc cctggtcatc gagtactatt cccgctaatc ccgaactgat
      361 tcgacggttc ggtagccatg cgaccctccg acttcgtcgg agggtttttg ttgcctgctg
      421 ccagccgcgc tgaaccggtc tctgcgcggg agtccggact tcgacgcaag gtgtttaggc
      481 tctttgactt aggattgtaa aaagttccga cagcgggctc tccattgcac gccttgccag
      541 tcaaaacagc ccgccatagc atccaagtaa gccagcctcg gtccccaccc gctcaccgat
      601 cgccccggcg atgaaggagc ctatgtcggt gccccctgca acggccacaa ttctcgtggt
      661 cgacgacgag atctcgctgc gccatattct cgcgcgtcag cttcggagcc agggatatac
      721 ggttctggag gcgggttatg gactggaagc actcgaggtc gcccgcaatt ccccggaccc
      781 ggtcgacctg gtcttgagcg atatcgtgat gcccggcatg atcggcacgg aactggccca
      841 gcgcctgttg gccgaacatc ccggcattca ggttgtgctc atgtcggctc acattgtcga
      901 tgagctggcg cgaccggatc ggtggaacgt tccggtgctg caaaagccat tggaagggaa
      961 aaaggtgctg gcgatcgttc agtcaatgct gagtacccca gagcctcacc gcgcaggcga
     1021 aaccctgatt ccgctctctc cgcaaccgcc gacttgatga cagacaacct gcttgctgcc
     1081 cgacagtatc tcacggcaat ccagtcgggt gccaccggtg atcaactggc gaggtttttt
     1141 gcggcggatg tcatgcagca ggaatttccc aatcggctca atccggaggg tgcgagccgc
     1201 gggctgagcg agatactcga gggggccgag cggggacaga aactgctccg aagccagcga
     1261 tatgaaatca ttcgagaggt gaccagcggc gagaacgtcg ccctcgaagt ccagtggacc
     1321 ggtacgctgt ctatcccgtt cggggggttg ccgcccggcg gagttttgcg agcccgtttc
     1381 gcggttttcc tggattatcg tgacgggaag atcgtccagc agcggaacta cgactgcttc
     1441 gatccctggt gagcagacgg gtgagcttcc cccgcagcag ccaccgcctt gtgaagatcc
     1501 caggccgctt tggcgatgac cccgaacacc ttctcgttcg gggcttgggc tgattcgccg
     1561 gtgcgaccgg catagatgat cgccgccata atcgccaccg tatcgacgtg ctccactatc
     1621 atgattggtt ctcccctgag ggtagaagaa gctctggcag gaatggtagc cctgcgccaa
     1681 caaaaaggcc tccgttcagg aggcccttta tgcatcaatg ccggcggtta ctgctgcgcc
     1741 agaggtccgg agctcacctg aaactcgtcg cgccggttct tggcccaggc agcctcgttt
     1801 tcggccgagt ccagtggccg ttcttcacca tagcctacgc tctcgagccg atcctgagcg
     1861 atgccctggc tgagcaggta gcgcatggcc gtcgccgcgc gacggttgct gagcgccagg
     1921 ttgtattcat ccgagccccg ttcgtcagcg tgcccctcaa cccgcatgct cagatttccc
     1981 agttggcgaa ggatttccgc cttggccgac agcttttgcc gtgcctcggc ggacaggtcg
     2041 gatttgtcga agtcgaaaga aatccgctct tccaggatgg cacgttgact ctggtccagg
     2101 cccttggcgg caatcggttc agtggcgcgc gtgggcgttg ccggagtctc aacttccggc
     2161 gcggcggcat cctggctgac tggctccggc atctctggct gggtcttgtg tccgcagccg
     2221 gcagccagga gcgcaagggc ggccaggtat cccgctgatc tgagtggacg atgcatgatg
     2281 caggcttcct ttcgtgtgga gctgcagcgt gttgcagcaa gagtgaaaga gttggccgtg
     2341 atgtgaggct tgaggccacg gattcggcgg ctgacagcgt gatcgcttcg cggagtgcag
     2401 agtgcatgcc gtcaattgat tccttcgacg gcgtcaaccg gcttccgttc cggtgcatcc
     2461 ccccaatagc ttcccaggcc tcgcatcagc ggagaatcgg gtgatcgatc tgaaggcgct
     2521 cgagtcgcga attcgggacg ggtccatcga caccgtcatc agcgccatca ccgatctgca
     2581 ggggcggctc atgggaaagc gggtgaccgg cgacttcttc ctggagcagg cccatcacgg
     2641 tacccacctc tgtacctatc tcctcggcac cgacatggag atgcgcacac cggccgggta
     2701 ccgcctgatg agctgggaga caggttacgg cgactatctc gcagctccgg actggtccac
     2761 gctccgcatc attccatggc tggagaaaac ggcgctggtg ctggccgacg tgaaggacga
     2821 agctaccggg acactggtgc cggttgcccc caggacagtg ctccgccaac aagtggagcg
     2881 ggcgcgccag atgggcttcg aggcgctgat ggcaagcgag ctcgagttct acctgctccg
     2941 tgatagctat gagggagccg ccaggaagaa ctttcatgat ctggagccgt tcggttggta
     3001 caacgaggac tatcatctgc tccaggccag caaggcggag ccactctatc gccgattccg
     3061 gaacgagatg tcggcagccg gaattcccgt ggagttcagc aagggcgagg cagcgccggg
     3121 ccagcacgag gtcaacatcc actacgccga cgcactggtg tcggc
//
LOCUS       DASRPQ010000413         1452 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_47484, whole genome shotgun sequence.
ACCESSION   DASRPQ010000413 DASRPQ010000000
VERSION     DASRPQ010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1452
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47484"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..217
                     /locus_tag="VFD73_04895"
     CDS             <1..217
                     /locus_tag="VFD73_04895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73353.1"
                     /translation="IRSEPAAGIMDSRHFVFRAHTAVRIGEPTERNESDRIEWIPLDD
                     VPGMIARHEIVSGITLVGLQQLLIQER"
     gene            233..424
                     /locus_tag="VFD73_04900"
     CDS             233..424
                     /locus_tag="VFD73_04900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73354.1"
                     /translation="MGAAPRFQLVSLVMLGGSDEAGECEARTCAGPLSSPACPLGLLL
                     RLLDLVSEAEAPVLLCGLQ"
     gene            complement(536..823)
                     /locus_tag="VFD73_04905"
     CDS             complement(536..823)
                     /locus_tag="VFD73_04905"
                     /inference="COORDINATES: protein motif:HMM:NF014520.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WhiB family transcriptional regulator"
                     /protein_id="HZI73355.1"
                     /translation="MSVSFLDVFNEVASSQDLPCRSYAPELFFAESPADVEYAKSLCT
                     TCPLKAECLAGALERSEPWGVWGGELFVQGVVVPRKRPRGRPRKSDTVTAA"
     gene            complement(991..1185)
                     /locus_tag="VFD73_04910"
     CDS             complement(991..1185)
                     /locus_tag="VFD73_04910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73356.1"
                     /translation="MSNITKKPFSNAVALPCALIPGASPRVHGISVVLMAVSPAQFKG
                     GAVGDAKYGGSGSRAWSPPV"
BASE COUNT          247 a          452 c          477 g          276 t
ORIGIN      
        1 gatccggtcg gagccggccg ccgggatcat ggactcccgg cacttcgttt tccgtgccca
       61 tacggcggtt cggatcgggg agccgaccga gcggaacgag tcggaccgga tcgagtggat
      121 cccgctggac gacgtacccg ggatgatcgc gcggcacgag atcgtcagcg ggatcacgct
      181 ggtcgggctg cagcagctgc tgatccagga acgctgaagg ggcggcaccc ctgtgggtgc
      241 cgcccctcgg tttcagctgg tcagcctggt gatgctgggt ggatcagacg aggcgggcga
      301 gtgcgaggcg cgcacgtgcg ctggccctct cagctcgccg gcctgcccgc tcggcctgct
      361 tctgcgcctt ctcgatctgg tgagcgaggc ggaagcgccg gttctgctct gcggccttca
      421 gtgaagcccg acagtgagca cgggcgagat cttcattgag taaatgcatt tcggtgctcc
      481 tagagaaagt ctgggtcgtc atcgttcgga ctcgtttcgg atggttgggt gtcgttcagg
      541 ctgcggtaac ggtgtcgctc ttgcggggac gcccacgggg ccgcttgcgc ggaaccacca
      601 caccttggac gaacagctcg ccaccccaca ctccccacgg ctcggaacgc tcgagcgctc
      661 cggccaggca ctcggccttc agcgggcagg tcgtgcagag cgacttcgcg tactcgacgt
      721 ccgccggcga ttcggcgaag aagagttctg gcgcgtagga ccgacagggc aggtcctgcg
      781 acgatgccac ctcgttgaag acatcgagga agctcacgct cattccggtc acctcccagt
      841 gacttgtggt gctgatcttt tgtcgtcgga gacggtccgc ggttgctgac cgccaaactt
      901 ggttcttcaa tgacgctcct ggacaaacaa aagggccgcg ggaccctttg gtgggttccg
      961 cggcctggag gtgccgggtc tgactcgatg tcagaccggt ggactccatg ctcgagaacc
     1021 cgaaccgccg tacttcgcat cgccgacagc tccgcccttg aactgggccg ggctgacagc
     1081 catcagcaca acggagatgc cgtgcacgcg cggcgaggca cccgggatca gggcgcacgg
     1141 cagcgctaca gcgttgctga acggcttctt ggtgatgttc gacatttccc aggcacctcc
     1201 tctcgttgtg gcgaagcaag cggatggctc gatcgctatg gttgtttgaa gttttcgggc
     1261 cggactccga ccgcagaaag aacagtacgc tgtcgtcctc ggagcccgca aactatttat
     1321 tggcatgttt gcgaagttgg ccggaagttg ccgccacggt gaccgaaacc ggtcgccgcg
     1381 acagacatcc accacgctcc ggggcgccga acgcacgctc cgagatcgtt gcctctgtca
     1441 cctaaatgcc ga
//
LOCUS       DASRPQ010000414         1131 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2868508, whole genome shotgun sequence.
ACCESSION   DASRPQ010000414 DASRPQ010000000
VERSION     DASRPQ010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2868508"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..374)
                     /locus_tag="VFD73_04915"
     CDS             complement(<1..374)
                     /locus_tag="VFD73_04915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73357.1"
                     /translation="MTLTLGAYFFFIALILAHLEIQIEGPHGWAEKLPTWRWDGPTVR
                     RLFGKPVTGYHVCLVTCILLFLHVPQFYAGSWEREADLLAMFFLLTVTWDFLWFACNR
                     HFGVARFRRGQVWWFPAWALGVP"
     gene            complement(495..>1131)
                     /locus_tag="VFD73_04920"
     CDS             complement(495..>1131)
                     /locus_tag="VFD73_04920"
                     /inference="COORDINATES: protein motif:HMM:NF039480.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF6529 family protein"
                     /protein_id="HZI73358.1"
                     /translation="AGDGRNAQGGRVVELRKNEATMIKDRGRSTSKRRTWTRVAPLLA
                     VFVVSFLTIRLLAGSRAGGYPSPPFFHLFFSDTIHMKAWLATGAIALALFQVMSAARL
                     FELFHWAPSGRLWGRMHRVSGYLAILLTAPVAYHCIFLLGFDTTSSRVAIHSVLGAGF
                     YGAFLVKVILVRSEGFPGWVLPVAGGLLFAILVGLWLTSSLYFFGSNPITL"
BASE COUNT          250 a          365 c          355 g          161 t
ORIGIN      
        1 ggcacgccga gcgcccaggc cgggaaccac cagacctggc cccggcggaa ccgggccacg
       61 ccgaaatgcc ggttgcatgc gaaccagaga aagtcccagg tcacggtgag gaggaagaac
      121 atcgcgagca ggtcggcctc gcgttcccag gagccagcgt aaaactgcgg gacgtgcaag
      181 aacaggagaa tacacgtcac gaggcagacg tgatatccgg tcaccggctt tccgaacagc
      241 cggcgcaccg tggggccgtc ccagcgccag gtgggcagct tctcggccca cccgtggggg
      301 ccctcgatct gaatctcgag gtgcgccagg atgagcgcga tgaagaagaa ataggctccc
      361 agcgtcaggg tcatcaggtg gccgctcccc gctcatagtc ccacactcgc gcgcatcgct
      421 gctccggtcg gacagagcgt gccccgcggg tggaggctcg tcaagcgccc cgttccaggc
      481 cgcccctggc ctcgctatag agtgatggga ttgctgccga agaaatagag cgatgaagtc
      541 aaccacagcc caaccaagat cgcgaacaag agaccccctg cgacgggcag cacccatccg
      601 gggaaccctt cggagcgcac caggatcact ttgaccagga atgctccata gaatccggcc
      661 cccaagaccg aatggatcgc gacccgcgag ctcgtggtgt caaaccccag caggaagatg
      721 cagtggtagg cgactggcgc cgtgaggagg atggcgagat atccggatac gcgatgcatc
      781 ctgccccaca aacgcccgga tggcgcccag tggaacaact cgaatagccg tgccgcgctc
      841 attacctgaa acagggcgag cgcgatggct cccgtggcca gccacgcttt catgtggatc
      901 gtgtcgctga agaataagtg aaagaaaggc ggtgaggggt agcccccggc gcggctgccg
      961 gcaagcaggc ggatcgtcag gaaagacacc acgaagaccg ccagaagcgg agcaacccgg
     1021 gtccaggtcc gccgcttgga tgtcgaccgt ccgcgatcct tgatcatggt tgcctcgttc
     1081 ttccgcagtt caactactcg cccaccttga gcattcctgc catccccagc g
//
LOCUS       DASRPQ010000415         1543 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1935861, whole genome shotgun sequence.
ACCESSION   DASRPQ010000415 DASRPQ010000000
VERSION     DASRPQ010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1543
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1935861"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..658
                     /locus_tag="VFD73_04925"
     CDS             <1..658
                     /locus_tag="VFD73_04925"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HZI73359.1"
                     /translation="TALSTARQYDRLVTVGVVPSRPETGYGYIVPGPALGDGARMVAR
                     FSEKPDAATALDLMAAGALWNSGLFAWTAARLLNEAEQHTPEVAPKLPLLRSGNVQQF
                     FQEVTPISIDVGLLERSGSVAVVSGAFAWDDIGTWQALTRVRPKDPNGNIVVGPAFMH
                     KAEDCIVWSERDTVVLSGVQDLIVVQANGRILVMPAEHAAHMKQLLDALPAEIRDVGS
                     "
     gene            655..>1543
                     /locus_tag="VFD73_04930"
     CDS             655..>1543
                     /locus_tag="VFD73_04930"
                     /inference="COORDINATES: protein motif:HMM:NF024951.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative sugar nucleotidyl transferase"
                     /protein_id="HZI73360.1"
                     /translation="MTSLYLLEPESPGAEWAPFAGVRPIAELRAGIWRIRERWEAAAG
                     NDATALLGDHAAGFAESDEPSIRALGAIDGPALIGAAWFAPTGVPLSPGPGVRRLVHA
                     EETVGWVVPGGERWRGPHESGPALVIDGIRLRGTFDLLTALEQLLSADCADFFAAPHR
                     GVPEGSIVLGDPSHVIVLGAAVEPGVVFDVRHGAVVVDQGSEVRSGTRLEGPLYIGPG
                     TRALGGFLRSSVFGPECRVHGEVSSSVFQGFANKSHDGFVGHSVIGQWVNLGAGTTTS
                     NLKNTYGPVRLEVAGARIET"
BASE COUNT          248 a          468 c          539 g          288 t
ORIGIN      
        1 gaccgctctc agcacggcca gacagtacga tcggctggtc accgtcgggg tggtcccctc
       61 gcgacccgag accggatatg gctatatcgt gcccggcccc gcactgggag acggagcccg
      121 tatggtcgcg cggttctccg agaagccgga tgcggccacc gctctcgatc tgatggcggc
      181 gggggcgttg tggaacagcg ggctctttgc ctggacggct gctcggcttc tgaacgaagc
      241 ggaacagcat actcccgagg ttgcccccaa gctgccgctc ctccgatcgg ggaatgtgca
      301 gcagttcttt caggaagtga ccccgatctc catcgacgtg ggacttctgg agcgaagcgg
      361 ctcggtggcc gtggtgagtg gtgcctttgc ctgggatgac atcggcacct ggcaggcgtt
      421 gacccgggta cggcccaaag atcccaatgg aaacatcgtc gtggggcccg ccttcatgca
      481 caaggcggag gattgtatcg tctggagcga acgggatacc gtggtgctga gcggcgtgca
      541 agacctgatc gtggtccagg cgaacggccg gatactggtg atgccggcag aacatgcggc
      601 gcatatgaag cagctcctcg atgcccttcc agccgaaatc cgcgacgtag gctcgtgaca
      661 tctctctatc tgttggagcc ggagtccccc ggggccgaat gggccccctt tgccggggtg
      721 cgtcccattg cggagctccg ggccggcatc tggcgcattc gggagcgctg ggaagccgca
      781 gccgggaacg acgcgaccgc actgctgggt gatcacgccg ccgggttcgc ggagtcggat
      841 gagccctcga tccgtgcgct gggggccatc gatgggcccg ccctgatcgg cgcggcctgg
      901 tttgctccca ccggcgtgcc gctgagtccc ggaccaggcg tacgtcgcct ggtgcacgca
      961 gaggagaccg tgggctgggt cgttcccgga ggtgagcgct ggcgaggtcc ccatgagagt
     1021 ggccccgctc tggtcatcga tgggatccgg cttcgaggca ccttcgatct gctcacggcg
     1081 ctggaacagt tgctgtccgc cgactgcgct gatttcttcg ctgcacctca ccggggtgtt
     1141 cccgagggca gcatcgtcct gggagatccg agccacgtca tcgtcctggg tgccgcagtg
     1201 gaacctggag tcgtgttcga tgtgcgccac ggcgcggtgg tggtcgacca aggcagcgag
     1261 gtaaggagcg gcacccgtct cgaaggcccg ttgtacattg ggcccggtac tcgcgccctg
     1321 ggcggttttc ttcggagctc ggtcttcggg cctgaatgcc gagtgcacgg cgaggtgtcc
     1381 agcagcgttt ttcaggggtt tgccaacaag agtcatgacg ggttcgtggg acacagcgtc
     1441 attggacaat gggtcaatct gggcgctgga accacgacct ctaatctcaa gaacacctac
     1501 ggaccggtgc gcctggaggt cgccggagcc cgaattgaga cgg
//
LOCUS       DASRPQ010000416         1243 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_987913, whole genome shotgun sequence.
ACCESSION   DASRPQ010000416 DASRPQ010000000
VERSION     DASRPQ010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1243
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_987913"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            614..1054
                     /locus_tag="VFD73_04935"
     CDS             614..1054
                     /locus_tag="VFD73_04935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73361.1"
                     /translation="MFPPVWGGIRASRANADTAGCARSTVAEALKALEWAGVLTWQHR
                     ITRIHDRCTDLFGRISWRWRVIRTSNAYAFRDPKSQLADVPASKSENQPGTQDQDILD
                     PVHHPARNPDSALERALARFGAAVAAKQGIEQDAGPPAGPHSHQ"
BASE COUNT          246 a          390 c          402 g          205 t
ORIGIN      
        1 atgaaacccc ccaccgccgt tcggtgaagg ggacttccta ctactgaaca aacttgcccc
       61 ggcatctgag aggtgccggg gccttttgtg agcctcactg atatacagac tattcgttcc
      121 gacttcgtcc tgtccacagg gtccgggcgc gggctgagca ggcggcggag caagcccgac
      181 agcatgtcag gaagaccgag ggcgcgctcg cggagctgcg tcggactgat gcagataggc
      241 gcgggccggg gggctgggcg cgtctacgtg ccgcgtggca tggagagtaa aaggcagccg
      301 ggcaggtgtg tcgcgcaaac ccgcccggcc taggtttcat tcccgggttg ggaagggaat
      361 ggggggatcg gcggcccggt ctgggtctgg gttccgccgg tccccgaagg ccgtcgtaac
      421 gagaaggctt ccattcggct accgaacggg aattgcaaag cgccgggttt tacaccgggc
      481 aggcgcggct ctgccccgcg cctcaggtca gaagcgcctt cgtggaaaga gcgatgactc
      541 ctccgagcaa taagcgggca gccaggacgc tgagaatcac gagagccgaa cgcatccccg
      601 ttctctgggc atgatgttcc ccccggtctg gggaggcatc agggcatcga gggcaaatgc
      661 cgacacggca ggctgcgccc gcagcacggt tgccgaggca ctgaaggcgc tggaatgggc
      721 cggtgtgctg acctggcagc accgtatcac ccgcatccac gatcgctgca ccgatctgtt
      781 cggccgcatc agttggcgct ggcgggtgat ccgcacgtcg aacgcctacg cattccgcga
      841 cccgaaatcg cagctcgccg atgttccggc ttctaagtcc gaaaatcagc caggaacaca
      901 ggatcaagat attcttgatc ctgtacatca cccggcacgc aatcccgaca gcgcgcttga
      961 acgtgccctt gcccgattcg gcgcagctgt tgcagcaaag cagggcattg aacaagacgc
     1021 cggcccaccg gccgggcctc atagccacca gtaggaggcg ccactggtcg acgaaccttt
     1081 ggacgatgct tcagcccgtg ccatcaacgc gcaggcatgg gaaccgccac ccggcatgat
     1141 caagcgacaa tgcccgcagt gccgatactg gttcgctgcg tcacctcata gcaacgagga
     1201 atgctgtccc gactgcgcca gcatcggaca gcgacgggtc gtg
//
LOCUS       DASRPQ010000417         2536 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_987938, whole genome shotgun sequence.
ACCESSION   DASRPQ010000417 DASRPQ010000000
VERSION     DASRPQ010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2536
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_987938"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..220)
                     /locus_tag="VFD73_04940"
     CDS             complement(<1..220)
                     /locus_tag="VFD73_04940"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZI73362.1"
                     /translation="MLPLSAKSLALLTYLVLEPGPHSREELAGLLWGESSDEEARASL
                     RQALKQLRGELGEILRSDRSVIQLCGPID"
     gene            416..571
                     /locus_tag="VFD73_04945"
     CDS             416..571
                     /locus_tag="VFD73_04945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73363.1"
                     /translation="MTTSGNLRITLTPEQKEQVRKATGKEAEAVELSIEELEERIAPM
                     RKKPLGL"
     gene            654..809
                     /locus_tag="VFD73_04950"
     CDS             654..809
                     /locus_tag="VFD73_04950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73364.1"
                     /translation="MENSKEQFRIHLTPEQKSQVRDATGKDAEAVELSVEELEERIAP
                     MKLKPKP"
     gene            924..>2536
                     /locus_tag="VFD73_04955"
     CDS             924..>2536
                     /locus_tag="VFD73_04955"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HZI73365.1"
                     /translation="MTQTVPPVPDNTLDLREEVERLRLMHSIGLEFSASLDFDELIPR
                     VFQRVLTALGAEGGSLWIAEGDMLCCRLAQGGASQKLIGAKMPVGTGFIGDVAQRPHT
                     TVVTRAVDDPRFQAQVDSGEMLALTVMATAMVAGGVTVGAIQVSNKLTGDGIFDERDR
                     ELLEGLAASAATALRNAQLHTVETRARDLALLLEISREITATLDLDRVLRSVVNLASR
                     ALAFDRGAVGLYQKGQCEIRAVAGQDTVDPKDPKLQDLIARAAWAAGQGEPLYLSDRT
                     APGSDAERMFVSIFDPDLERDGVQSGVYLPLKDEEGVLGVLVFEASQPDFATPVQLEL
                     AGILANQTAVALRNAQLYHQVPMVDALGALAAKRQAFQAVPRRKLQIYAAAAVVVLAV
                     LSLVRWPLRVSGTDAVFRPMMLTPVRALVPGVVERLLVQEGARVTKDMPVATLRASQL
                     LSEQAATAAEVSAADRAAALAASRGDAAEERLQRIRGDALRQEQQLLDQEVGLTTIRA
                     PTSGVVLTPHLSEKVGTSLDEGDLVLTIGR"
BASE COUNT          489 a          760 c          833 g          454 t
ORIGIN      
        1 agtcgatggg cccgcagagt tgaatcacgg accggtcgga ccgaaggatc tcgcccagtt
       61 ccccccgaag ctgtttgagc gcctgccgaa gggacgcgcg cgcttcctcg tccgatgact
      121 caccccaaag gagcccggcc agctcctcac gcgaatgcgg tccgggctcg agcaccaggt
      181 acgtcagcaa ggccagggac ttggcactga gcggaagcac actaccgcca gccgcccggg
      241 agacggtggg aggaccgatg agattgagtg tgacgttggc cagtagggcc cggcctgcga
      301 ggggagttac aaccttacga caaattcacg gacctgcaag gggcttttca cgctctcttc
      361 acgctgcggt tgcagattgt ctcccgttca gttggcccat tcacaggagc gatctatgac
      421 gacctcagga aatttgcgga tcacgctgac gccagaacag aaggagcagg tccggaaggc
      481 aaccggcaaa gaggctgaag cggttgagct ttcgatcgag gaactggagg agcggatcgc
      541 tccgatgcgg aagaaaccct taggcctctg atttttcacg attttttcac ggtgagtcgc
      601 aacattgcga atgtcacttc gacgccatac ccgtcacaat ccaggaggac tctgtggaaa
      661 attctaagga gcagtttcgg atccatctga cgcccgagca gaagagtcag gttcgtgatg
      721 ccaccggcaa ggatgcggaa gcggtggaac tctcggtcga agagctcgag gagaggattg
      781 ctccaatgaa gctcaagcca aagccctaat aactagcggt agttagcagc tgaaaatttg
      841 atcgctctgg tgccgcccct tccgggcccc ggcaccagag ctatgttgtt gtgtgagact
      901 cccgccggcc tgtcgaacga gagatgacgc aaacggttcc cccggtccct gataatactc
      961 tcgaccttcg agaagaggtc gagcggctcc ggctcatgca ctccatcggc ctggagttca
     1021 gcgcgtcgct ggatttcgac gagctgattc cccgggtgtt tcagcgggtg ctgacggcgc
     1081 taggagccga gggcggttcc ctctggattg ccgaggggga catgctctgc tgccgcctgg
     1141 cgcaaggcgg ggccagccag aagctgatcg gcgcgaagat gccggtgggc acgggcttta
     1201 tcggagacgt ggcccaacgg ccccacacca cagttgtaac ccgcgcagtc gacgaccccc
     1261 gcttccaggc ccaggttgac tcgggcgaga tgttggcctt gaccgtcatg gcaacggcta
     1321 tggtcgccgg tggagtgacg gtgggtgcca tccaggtctc gaacaaactc actggcgacg
     1381 gaattttcga cgagcgcgac cgggagctac tcgagggtct tgccgcgagc gccgctaccg
     1441 ccctgcgcaa cgcccaattg catacggttg aaacgcgcgc gcgtgacctg gctctgctgc
     1501 tggagatcag ccgcgagata actgctacgc tcgacctgga ccgagtcctt cggtcggtag
     1561 tgaatctggc ttcccgtgcc ctggcgttcg atcgcggggc ggtgggcctc tatcagaagg
     1621 gtcagtgcga gatcagggcc gtagcgggcc aggacaccgt ggacccgaag gatcccaagc
     1681 tccaggacct gattgcgcga gcggcgtggg cggccggcca aggagaaccg ctctacctca
     1741 gtgaccggac tgcgcccgga tcggatgccg agcgcatgtt cgtctccatc ttcgaccccg
     1801 atctcgagcg agatggggtg cagagcgggg tctaccttcc cctcaaggat gaggaggggg
     1861 tgctgggggt tttggtattc gaggcctctc agcccgactt tgccactccg gtacaactgg
     1921 agctggcagg gatactcgcc aatcagaccg cggtagcgct gcgcaacgcc cagctgtacc
     1981 accaagtgcc catggtcgat gccctggggg cgctcgccgc gaagcgtcaa gcgttccagg
     2041 cagttccgag gcgaaaactc cagatatatg ccgcagcggc agtggtggtg ttggcggtgc
     2101 tctctttggt acggtggccg ctccgcgtca gcggcactga tgcggtcttt cgtcccatga
     2161 tgctgacgcc ggtgcgagcc ctggtgccgg gcgtcgtcga gcgtctgttg gtccaagaag
     2221 gagctcgggt gaccaaggac atgccggtgg ccaccctccg agcaagccag ctcctgagcg
     2281 agcaggccgc aaccgcggca gaagtgagtg ccgccgaccg ggccgctgcc ctggccgcca
     2341 gccggggtga tgccgccgag gagcggctcc aaaggatccg aggtgacgca ctgcgtcagg
     2401 agcaacagtt gctcgatcag gaggttgggc tcaccaccat tcgcgccccg accagcgggg
     2461 tggtgctgac cccgcacctc tcggaaaagg tgggaacttc gctggacgaa ggagatctgg
     2521 tcctgaccat cggccg
//
LOCUS       DASRPQ010000418         1172 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_47758, whole genome shotgun sequence.
ACCESSION   DASRPQ010000418 DASRPQ010000000
VERSION     DASRPQ010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1172
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47758"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            154..>1172
                     /locus_tag="VFD73_04960"
     CDS             154..>1172
                     /locus_tag="VFD73_04960"
                     /inference="COORDINATES: protein motif:HMM:NF018968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1464 family protein"
                     /protein_id="HZI73366.1"
                     /translation="MTRAVGIDPGTVSIDVCGLIDGEVYLDHSWPTQQALASSDEFIR
                     LLTEFGVPDLVAGPSGYGLPLIRAHELTDADLRLAFLAGPDEPGGIGGLRRFAKLLGS
                     SGLPVVFLPGVIHLQTVPEHRKLNRVDLGTADKLSAAVLGIQQECVRRGSRSDQVSFI
                     LLELGGAFTAGVAVEQGQVVDGIGGTSGPIGWQAAGALDGEVAFLAGRISKADLFQGG
                     ISTLLERDRTRASIAHDAYREGAVKAVRQLRHSAPSARDVLLSGRRSTPEMVERLRRE
                     LADVGAVRRLNGFAQQAKEGAQGAALLADGLAGGQYRDLVDRLGLRHARGTVLDHLLF
                     VSPDRA"
BASE COUNT          201 a          343 c          413 g          215 t
ORIGIN      
        1 cgtctcttca cccgaaacga tctggtgctg gacgccgagg ccattgccga gattgcgcgt
       61 gagctgctgg ggaccaagga accagcaagg aaagacagtg cgactcgccg ggagcccgac
      121 gccagaaaag agctcgcaaa gaagaagtaa gcgatgaccc gagcggtggg gatcgatccg
      181 ggcacggtca gcatcgacgt ctgtggcctg atcgatggcg aagtgtatct cgaccacagc
      241 tggcccactc agcaggcgtt ggccagttcg gatgagttca ttcgcctgct caccgagttc
      301 ggcgtgccgg acctggtggc aggtccttcc ggctacggtc taccgctgat ccgggcgcat
      361 gagctgacgg acgccgatct gcgtctggcg tttctcgccg ggccggacga gcccggcggc
      421 attggcggac tcagacgttt cgccaagctg ctgggaagct cgggactgcc ggtcgtgttt
      481 ctgccgggag tcattcatct gcagacggtt ccggagcacc ggaagctgaa tcgcgtggat
      541 ctgggcacgg cggacaaatt gtcagcggct gtgcttggca ttcaacagga gtgtgtgcgc
      601 cgagggtctc gatcggatca ggtctccttc attctcctcg agctgggggg agcgtttacg
      661 gcaggcgttg ccgtggagca ggggcaggtg gtggacggaa tcggcggcac cagtggccct
      721 atcggatggc aagccgcagg cgcgctcgat ggagaggtgg cattcctggc aggccggatt
      781 tccaaggccg atctcttcca gggtggcatc tcgacacttc tcgagcggga tcgcactcgc
      841 gcttccatcg cccacgacgc ctatcgcgag ggagcagtga aggcggtgcg ccagctccgg
      901 cattcagcgc cttcggcccg cgacgttctg ctctccggac gaaggagcac accggagatg
      961 gtagagcggt tgcgacgcga gttggcggac gtcggagcgg ttcggcgcct caacggtttt
     1021 gcccaacagg ccaaagaggg agcccagggt gcggcgctcc tggccgatgg tctggcgggc
     1081 ggtcagtacc gtgacctggt cgatcgcctg ggccttcggc acgccagagg aacggtgctg
     1141 gaccatctgc tctttgtctc cccggatcgg gc
//
LOCUS       DASRPQ010000419         1459 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1614832, whole genome shotgun sequence.
ACCESSION   DASRPQ010000419 DASRPQ010000000
VERSION     DASRPQ010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1459
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1614832"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(253..1032)
                     /locus_tag="VFD73_04965"
     CDS             complement(253..1032)
                     /locus_tag="VFD73_04965"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HZI73367.1"
                     /translation="MPLPLALAFAFLFGLSVGSFLNVVIARLPAGRSIVRPGSSCPRC
                     GSAIAWYDNVPLLSYALLRARCRSCQAWISWRYPAIEFTCGALFVLAYLSFGSSPQLV
                     AALIFLAGLVAITWIDLDHQIIPDVLSLPGIVLGLLLSLAPGGIGWKDALVGTIVGGG
                     LFVLIIVGSALVIGQPGMGVGDVKLGAMIGAFLGWKLVLLSILLSVLIGGPLAAALLA
                     TGRKGRKDPVPFGPFLAMGGMISLFCGNALLAWYFGQFLAE"
     gene            complement(1188..>1459)
                     /locus_tag="VFD73_04970"
     CDS             complement(1188..>1459)
                     /locus_tag="VFD73_04970"
                     /inference="COORDINATES: protein motif:HMM:NF019934.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type II secretion system protein GspG"
                     /protein_id="HZI73368.1"
                     /translation="RARLAKAQADARALASAVSIYSAHMGTLPTALTNLTSVVTNSLG
                     QPAGPFLASVPAGPAGWGTYVYTPVASAGTFTISNSGDSTSVSVP"
BASE COUNT          294 a          459 c          503 g          203 t
ORIGIN      
        1 caggggcagg cctccggaat cgcgtccgat gccgtggacg aggcgatcac ccctggaact
       61 cacagccaat tcaagcagtt gcggagctat cccacatgga tcagtcacgc cgacgcgttg
      121 ggctccgcac ggcattccag actgccagtg gtgggtgacc aaaggcgtca tcggcagcga
      181 cggaggcggt cgctgcgcgg tggtcttgtt gtaaagcggg acaggggtga cgtcagcccg
      241 gcgacggccg attcactctg cgagaaactg cccgaaatac cacgcgagaa gcgcgttgcc
      301 acagaagagg ctgatcattc ctcccatcgc gaggaatggc ccgaaaggga ccggatcctt
      361 cctgcctttc cggccggtgg cgagcaatgc cgccgccaga gggccgccga tcagaaccga
      421 gagcaagatg ctgaggagca cgagcttcca gcccaggaat gccccgatca tggcgccgag
      481 cttcacgtcg ccgacgccca tgccaggctg accgatgacc agcgcgctgc ccacgatgat
      541 cagcacgaac aagccccctc ccacgatcgt tccgacgagc gcgtccttcc atccaatgcc
      601 gcccggagcg aggctcagca acaaccccag gacgatgccc ggcaggctga gcacgtcggg
      661 gatgatctga tggtcgaggt cgatccacgt gatcgcgacg agcccggcga ggaagatcaa
      721 ggcggcgacg agctgaggac tcgagccgaa ggacagatag gcaagcacga agagtgctcc
      781 gcacgtgaat tcgatcgccg ggtagcgcca cgagatccag gcctggcagc tgcgacagcg
      841 agcccggagc agtgcgtacg acagcagggg gacgttgtcg taccaggcaa tcgcgcttcc
      901 gcaccgcgga caagaggatc caggacgaac gatgcttcgg ccggcgggca aacgggcgat
      961 caccacgttc aagaagctgc caacgctgag gccgaagagg aaggcgaacg ccagagctag
     1021 cggcagtggc atcatccggc cttgccctgg atcctgtgca cgtcgatcct gatcatatct
     1081 gcactaccgg gcagttccct cagactctga gcacgtcagc cgccgacgtg cgtcggggga
     1141 ggcgggacat gcccgcctcc cccgagtggt caaccctgct ggagtgacta cggaacggag
     1201 acgctggtgc tgtcgccgga gttgctgatg gtgaaggtac cggcggacgc caccggggtg
     1261 tagacgtagg tgccccagcc cgcgggcccc gccggcacgc tggcgaggaa gggaccggcc
     1321 ggctggccga gcgagttggt cacgaccgag gtgaggttcg tcagggccgt ggggagcgtg
     1381 cccatgtgtg cggaatagat gctgacagcg gacgcgaggg cccgggcgtc ggcctgggcc
     1441 ttggccagcc gcgcgcgcg
//
LOCUS       DASRPQ010000420         5848 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3191208, whole genome shotgun sequence.
ACCESSION   DASRPQ010000420 DASRPQ010000000
VERSION     DASRPQ010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5848
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3191208"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..1064)
                     /locus_tag="VFD73_04975"
     CDS             complement(45..1064)
                     /locus_tag="VFD73_04975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73369.1"
                     /translation="MPLHPFFGLGMATAASFATPEQHPTIAPYAAEAMVRDTLRNKPH
                     STSATSSSSRSEVVSGYWSSWGLPPVPGQLAVTDTQVVLRSLPAAMGLSSPLQLRPTD
                     VTLAYVDQDTDGIHYIFRIDAGVFETDFPGPLLEVATELRSLDHDRPEAGLAYQPLVN
                     PGDAAAVQKKAREIAFSPYADSLYVLFGRPAAGIGVVGPKGRRAGRLGEYIAARDSLA
                     LDPGRIVGQAQLRHALAHEMGHRWQSRSKAQLATLWKGVPEIRDPRRYGYADRSEHQA
                     EAIAFAFSFLQATASSKDSPATSLQLLDHYERLVPGTRIIARYLLLQPLYAGHPLRSA
                     LTTRP"
     gene            complement(1076..1312)
                     /locus_tag="VFD73_04980"
     CDS             complement(1076..1312)
                     /locus_tag="VFD73_04980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73370.1"
                     /translation="MASTSASEFTVSAEPSPSPTAPSGPSNLSAFGRTAMAILATMVL
                     LIVALTGILVETTWHHPAGSVEVAPGEPGSFARR"
     gene            complement(1312..2838)
                     /locus_tag="VFD73_04985"
     CDS             complement(1312..2838)
                     /locus_tag="VFD73_04985"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HZI73371.1"
                     /translation="MKRLILWTNLLALAACARAMPPAPSGISPVAAIPGFRLPDISLS
                     KQRQNATADAAVNDLADAEPDADAVPSFDADKVSWDIDVRSFADHPRVQYYLNYFQGA
                     SRPGMTLFLTRGAQYEPMIRRRFEAEGLPGDLGYLALIESGYSNDAVSRSRAVGMWQI
                     MKSTAQGYGLRIDSWVDERRDPVKATDAAARHLHRLRDRFGSLYLAAAAYNAGAGKVS
                     RSLGKLQWDAQDVNDSADTLDTVVEDPDSVAEDVAEVDTADAETAIDSTDVTSDAAFF
                     RLAGNDLLTVETQDYVPKLIAAAVVAKQPERFGIVLPAAAPFSYDSLVVSGPTGLDVV
                     ARLADVPVADIQELNPQYLRLATPPHSVSVIRLPPGTGETVETAFDKLKPEARIHFMT
                     HVVRRRERLGAIAARYHLPVQEIRAANPAGRTAHLKAGTRLIIPTVAIPSALAMRAAI
                     GPALAVRQYRVATHRVRAGETLIGIARHYRVSVRALRRVNALPVEYTLRAGKRLRIPS
                     "
     gene            3029..4273
                     /locus_tag="VFD73_04990"
     CDS             3029..4273
                     /locus_tag="VFD73_04990"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI73372.1"
                     /translation="MNPVPHVPYSSLRFPNFRWFIASLLAMTVATQIQAVVVSWQIYQ
                     LTRDPFSLGLIGLAEAVPFIGFALFAGHVADTAGRLRISLISLVVLLGCSLTLLGFSV
                     RPGIIGPGRVWPVYLVIFVSGIARSFLQPARSALGAELVPRELYHNAVTWRSSSWQLA
                     EVVGPAIGGLVYGFGSASAAYAVDASLMAVGLLSLARIQHRPRSTLSTESSFLGSLAS
                     GIRFVRSQPVILGALTLDLFSVLFGGAVALLPVFAAEILHAGPEGLGVLRAAPAVGAV
                     AMSLVLAHRPPLRRAGHTLLVSVALFGLSMIGFGLSRNFLLSTGLLAMSGMFDTISVV
                     IRSTLLQVMTPDHLLGRVASVNAIFIGSSNELGAFESGTAARLIGTVPSVVAGGLATL
                     LVVLVTAVKVPTLRKLQEIRSP"
     gene            4294..5232
                     /locus_tag="VFD73_04995"
     CDS             4294..5232
                     /locus_tag="VFD73_04995"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HZI73373.1"
                     /translation="MRSNGSGADSSATAPHLGGKGRLAVVVWLVLCAIWGSTWLAIKL
                     GLRDLPPLTFAGIRFALAAILLGIIVWRPRGPVVRLSSEDWWVLAYTGFLSITVNYAL
                     VFWGEQYISSGLAALLSATVPLFGLPLAHWYLDAEPLTWRKVAGALLGLVGVGIVFSG
                     ELGIGGPRALWASIGIIVAALATAHAGVLVKHRATHIDPSVLAGVQMAGGCIPLLLLG
                     TALEGNPLSYHWTGLAVACLAYLTIVGSVIAFMLYYWLIRHTPVTGVLMIPLVTPLIA
                     VLFGVVFGGEMIGWHTAFGGTAILAGVGMAVLSRRS"
     gene            complement(5234..>5848)
                     /locus_tag="VFD73_05000"
     CDS             complement(5234..>5848)
                     /locus_tag="VFD73_05000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73374.1"
                     /translation="LYFESAQLDLDAKVPSKRYRGKMYRELLASDEGRDYLAWMAESF
                     NEPEIRDFVRRLLAGEDIVSRRGRQLNPHWYEHGAMKAARNARFRLIPGSVRAQVMAA
                     AKESGRTRVVDTKPATSPSELPGEFASRREPVGRPGPHSPTEKQVAFYQRLAASPVFT
                     DEERKRALDWLATKATRQTIKDQIDWLKRQVETRKPRSANESAA"
BASE COUNT          995 a         1769 c         1895 g         1189 t
ORIGIN      
        1 gggtgaatgc cagctgactg gggaacgctg ctacctgcga ggtctcaggg tctggtggtc
       61 agggccgatc gcaacgggtg gccggcgtag agcggctgga gcaggagata tcgagcaatg
      121 attctcgtgc ctggaaccag ccgctcataa tggtcgagca actggagcga ggtggcagga
      181 gagtccttcg aagaagccgt tgcttgaagg aagctgaagg caaaggcgat ggcctcggcc
      241 tgatgctcgg aacggtcagc gtatccatag cgtcgcggat cacggatctc cggcactcct
      301 ttccagagag tggcgagctg cgccttcgat cgcgactgcc agcgatgtcc catctcgtga
      361 gccaacgcat gacgcagttg cgcttggccg acaatgcgac caggatcgag cgcgagtgaa
      421 tccctggcag cgatatactc gcccaatctt ccggcacgcc gacccttagg tccaaccact
      481 ccgattccgg cagcgggccg tccgaacagc acgtagagtg agtctgcata cgggctgaat
      541 gcgatttccc gtgccttctt ctgaactgca gcagcatccc cgggatttac cagcggctgg
      601 taggcaaggc ccgcctcagg gcggtcatga tcgagcgatc tcagctcagt agccacctcg
      661 agtaatgggc ccggaaaatc cgtctcgaac actcccgcgt cgatccggaa gatgtagtgg
      721 attccgtccg tgtcctgatc cacgtaggcc agcgtcacgt ccgtcggccg tagctgcagt
      781 ggagaggaga ggcccatggc ggccggcagc gaccgaagaa ccacctgggt gtcggtgacg
      841 gcaagctgtc ccggtaccgg cggcagtccc cacgatgacc agtagcctga aaccacttca
      901 ctgcgagacg aactggacgt ggcgctggtc gaatgcggct tgtttctgag ggtgtcccga
      961 accatcgctt cggcagcgta aggcgcaatg gtcgggtgct gttcaggagt ggcgaacgac
     1021 gctgctgtag ccatgccgag gccgaaaaac gggtggagcg gcatggcgca gcaaatcaac
     1081 gccgggcgaa gctccccggc tcgccagggg cgacttcgac cgaaccggcg ggatggtgcc
     1141 aagtggtttc caccaggatt ccggtgagtg ccacgatgag aagcaccatg gtggccagaa
     1201 tggccatcgc tgtgcggccg aaggccgaca ggttgctagg cccgctgggg gcagtgggag
     1261 aggggctggg ttcggcagac acggtgaatt ccgaggctga ggtggaagcc atcaactggg
     1321 gattcgaagc cttttccctg cgcgcaacgt gtactcgacc ggtagggcat tcacccggcg
     1381 gagggcccgc accgacaccc ggtaatgccg ggcaatgccg ataagagttt cacccgcgcg
     1441 gacccggtgg gtggcaaccc gatactgccg caccgcaaga gcgggcccaa tggcggcgcg
     1501 catggccagc gccgacggga ttgcgacggt ggggatgatc aggcgagtgc ctgctttgag
     1561 atgggcggtg cggcccgctg gatttgccgc ccgaatctcc tgtactggga ggtgatagcg
     1621 agctgcgatg gcacccagtc tctcccggcg ccggaccacg tgagtcatga agtggattcg
     1681 ggcttcgggc ttcagcttat caaatgcggt ttcgactgtc tcgccggtac cgggtggcag
     1741 acgaatcacc gagaccgagt gcgggggagt ggccagccgc aagtactgcg ggttcagctc
     1801 ctgaatgtct gccactggca cgtcggccaa ccgggcaacg acatccagcc cagtggggcc
     1861 agacacgacc agggagtcgt agctgaacgg agcagctgcg gggaggacga ttccaaagcg
     1921 ctccggctgc ttggcgacga ccgcggcggc gatcagcttc gggacataat cctgagtttc
     1981 cacggtgaga agatcgttgc ccgccagccg gaagaatgcc gcatcgctgg tgacgtcagt
     2041 gctgtcgatc gctgtttccg catcagcggt gtccacctcg gccacgtcct ctgccactga
     2101 gtcgggatct tccacaacgg tatccagcgt atcggctgaa tcgttcacgt cctgggcgtc
     2161 ccattgcagc ttgcccaggc tgcgcgacac cttgccggct ccagcattgt atgcagcggc
     2221 ggccagataa agcgatccga atcgatcgcg caatcgatgg aggtgacggg ccgcagcatc
     2281 ggtggccttg accgggtcgc ggcgctcgtc aacccaactg tcgattcgca ggccgtaacc
     2341 ctgtgcagtg ctcttcatga tctgccacat gcccaccgcg cgtgatcggc tcaccgcgtc
     2401 gttggagtag ccactctcga tcagtgccag gtagcccaga tctccgggca acccctcggc
     2461 ctcgaatcgg cgtcgaatca tcggttcgta ctgcgcgcca cgggtgagga agagagtcat
     2521 tcccggccgg gacgctccct ggaagtagtt gaggtagtac tgcactcgcg ggtggtccgc
     2581 aaaactcctc acatcgatat cccaactcac cttgtcggcg tcgaaggagg gtacggcatc
     2641 ggcgtccggc tcggcgtcgg cgaggtcgtt caccgcggcg tcggcggtgg cgttctgccg
     2701 ctgtttggac agcgatatgt ccggcagtcg aaatccgggg attgctgcga ccggggaaat
     2761 accggagggt gccggcggca ttgcgcgcgc acacgcggca agggccagga ggttggtcca
     2821 gaggatcagc cgcttcatgc ctgccaggag taagtgcgga ttagagagtg ttaacggcgc
     2881 tttcactcgc acaaaatggg ccgcttcgtg cagaacgcca cagtcgttcg tgcgcaacga
     2941 cttagcgaac cggacctccc aacttgctgc cggtggcacc cgcaaaactc tttgcccatc
     3001 ggcaaatcgc agctactttg cgccgcgaat gaatccagtt ccccacgttc catattcctc
     3061 ccttcggttt cccaacttca ggtggttcat agccagtctt ctcgccatga cagtcgccac
     3121 tcagatccag gcggtggtag tgtcgtggca gatctaccag ctgaccagag acccattctc
     3181 cctcggcctc atcggcctgg ctgaggcggt ccccttcatc ggctttgcgc tgtttgccgg
     3241 gcacgtggca gatacggccg gccggcttcg gatttcgctg atttccctgg tcgtattact
     3301 gggctgctct ctgacgctgc tcggattttc cgtacggcct ggtatcatcg gaccgggacg
     3361 agtgtggccg gtttatctgg tgattttcgt cagcggcatt gcccggagct ttctgcagcc
     3421 ggcgcggtcg gccctcggag cggaactcgt tccgagggag ctgtatcaca acgcggtgac
     3481 ctggcgcagc tccagctggc agctggcgga agtcgtcggg cccgcgattg gcggcctggt
     3541 gtatggattc gggagcgcca gcgcggcgta cgccgttgac gcgagcttaa tggcagtggg
     3601 acttctttcc ctcgctcgta tccagcaccg gcccagatcg actctctcaa ctgaatcgtc
     3661 gttccttgga agcctggcct ccggcattcg cttcgttcga agtcagccgg ttattctcgg
     3721 tgccctgacg ctggatttgt tctcggtgct gttcggggga gcggttgcac tgctgccggt
     3781 ctttgcggcg gaaatcctcc acgcgggtcc agaaggactt ggggtcctgc gcgcggctcc
     3841 cgcggtgggc gcggtggcca tgtcgttggt cctggcacat cgcccgccgc ttcgacgagc
     3901 cggacatacc ttgctggtca gcgtagcact tttcgggctt tcgatgatcg gcttcggcct
     3961 gagccgcaac ttcctgctct cgaccggtct gctcgcgatg agtgggatgt tcgatacgat
     4021 cagcgtcgtg attcgctcaa ccttgctgca ggtcatgact ccggatcatc tcctgggtcg
     4081 agtcgcctca gtgaacgcga ttttcatcgg gagctccaat gaactcggcg cgttcgaatc
     4141 cggaacggcc gcgcggctca ttggaaccgt cccctcagtc gtggcgggcg gcctggcaac
     4201 cttgctcgtt gtgctcgtga ccgccgtgaa ggtgcccacc ctcagaaagc ttcaggagat
     4261 ccgcagcccg tgacggctca ggaaacagtc ggcatgcgct cgaatgggtc cggggctgac
     4321 tcgagtgcga cagccccgca cttgggcggc aaaggacggc tggcggtggt ggtgtggctg
     4381 gtactctgcg cgatttgggg atcgacctgg ctggcaatca agttgggatt gcgagacctt
     4441 cctcctctca cctttgccgg tatccgcttc gcacttgctg cgattctcct gggtatcatc
     4501 gtctggcgac cacgaggccc cgtggtccgc ctcagctccg aagactggtg ggtgctggcg
     4561 tataccggct tcctgagtat caccgtcaac tacgctctgg tcttttgggg agagcagtac
     4621 atctcgtcag gattggcggc tctactcagt gcaacggtgc cgctcttcgg gctgcccttg
     4681 gcgcactggt atctggatgc ggagccgctc acctggcgga aggtcgcggg tgcgttgctc
     4741 ggcctggtcg gagtcgggat cgtattttcg ggagagctgg gaatcggggg accgcgtgcg
     4801 ctctgggcca gcatcggcat catcgtcgcg gcactcgcca ccgcgcatgc gggagtgctg
     4861 gtgaaacacc gcgctactca catcgatccc tcggtactgg ccggtgtgca gatggccgga
     4921 ggctgcattc cacttctcct gctcggcacg gcactcgagg gaaacccgtt gagctatcac
     4981 tggaccggcc ttgccgtggc ctgtctggca tacctgacga ttgtcggttc agtcattgcc
     5041 ttcatgttgt actactggct gatccgacat actcccgtca ccggggtctt gatgattccc
     5101 ctggtgactc cattgattgc cgttctcttt ggggtggtgt tcggaggaga gatgataggc
     5161 tggcatacgg ccttcggcgg taccgccatc ctcgctgggg tggggatggc ggtcctgagc
     5221 cgaagaagct gacttatgct gccgattcgt ttgccgatcg cggcttccgg gtctcgacct
     5281 ggcgcttgag ccaatcgatt tggtccttga tcgtctggcg ggtggccttg gtggccagcc
     5341 agtcgagcgc gcgcttccgc tcctcgtcgg tgaagacggg ggatgccgcg agccgctgat
     5401 agaaggcgac ctgcttctcc gtcggggaat gcggtcccgg gcggccgacc ggctcccgcc
     5461 ggctggcgaa ctccccgggc aattcgctgg gggaagtcgc aggtttcgta tcgacgactc
     5521 gagtcctgcc cgattccttg gccgctgcca tcacctgcgc ccgcacgctt cccggaataa
     5581 gccggaatcg cgcgtttcga gcagccttca tggcgccgtg ctcataccaa tggggattga
     5641 gttgacgccc gcggcgggaa acaatgtcct cacccgccag tagccggcga acaaagtcgc
     5701 ggatttccgg ctcgttgaag ctttcggcca tccaggcgag atagtcccgg ccctcgtcgg
     5761 aggccaacag ctcccgatac atctttccgc gatatctctt actggggacc ttcgcatcga
     5821 ggtccagttg cgccgactcg aagtacag
//
LOCUS       DASRPQ010000421         1385 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3812486, whole genome shotgun sequence.
ACCESSION   DASRPQ010000421 DASRPQ010000000
VERSION     DASRPQ010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1385
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3812486"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..301
                     /locus_tag="VFD73_05005"
     CDS             <1..301
                     /locus_tag="VFD73_05005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73375.1"
                     /translation="EVIRIFRIAGEYAAKLWTGTMPESGIGSQAALAAGALPGCVYPS
                     DLEPSSRWFGPGSDVIELRMDAKGRMQVPNRSVATLLDRERFAAASRLLTITPAR"
     gene            366..593
                     /locus_tag="VFD73_05010"
     CDS             366..593
                     /locus_tag="VFD73_05010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73376.1"
                     /translation="MGFGDTVRRWAGWVCLALVAIFVLLGYYFGNIRFTPIAGGFLIL
                     SAVFLIERGEEQVGSNAIHQGADSGVHRARR"
     gene            544..840
                     /locus_tag="VFD73_05015"
     CDS             544..840
                     /locus_tag="VFD73_05015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73377.1"
                     /translation="MPFTREQIRESIERAGDEHWRALVRHHEDAYPASRPTPGDVAKA
                     EAERLNGMGLDRDPNLTLVESRVEQQPSSVRLTHLFEYRPLGIRLQTEPYTGYE"
     gene            862..>1385
                     /locus_tag="VFD73_05020"
     CDS             862..>1385
                     /locus_tag="VFD73_05020"
                     /inference="COORDINATES: protein motif:HMM:NF013256.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73378.1"
                     /translation="MPGYTFHLIPHTHWDREWYLPQTVFLPRLIAALDDLFDRLTTEP
                     ELTFLLDGQTVLLDDYLRVRPERAAQAADLVRGGRLQVGPWYVLADELIPSGESLMRN
                     LLLGKSDSDAVGGRTDVLYSPDAFGHPAVWPQLAGEFGIRFGVVWRGLGGEPGQEHDL
                     YRWRGPDGREVLLY"
BASE COUNT          233 a          433 c          454 g          265 t
ORIGIN      
        1 tgaggtcatc cggatttttc gaatcgcagg ggagtatgct gccaagctct ggaccggaac
       61 gatgcccgag tcggggatcg gctctcaggc agcactcgcg gcgggcgcac tgccgggctg
      121 cgtgtatccc tccgacctgg agccgagcag ccggtggttc ggccctggat cggacgtgat
      181 cgagctgcgc atggatgcaa aaggtcgcat gcaggtgccc aaccgctcgg tggccacgtt
      241 gctcgaccgg gagcgattcg cggccgcatc gcggctttta acgatcactc cggcaaggtg
      301 acctgtggta cagcccaccc aaccccggtg ccgcatcatt catacggcac cttccaggag
      361 cgatcatggg gttcggagac acagtccgac gctgggcggg atgggtttgt ctcgcgctgg
      421 tagcgatctt cgtcctgctc gggtactact tcgggaacat ccggttcacg ccgattgctg
      481 gagggttcct cattttgtcc gccgtgttcc tgatcgagcg cggtgaggag caggttggga
      541 gcaatgccat tcaccaggga gcagattcgg gagtccatcg agcgcgcagg tgacgagcac
      601 tggcgggctc tcgtccgcca ccacgaggac gcctacccgg ccagccgtcc gacaccgggg
      661 gacgtcgcca aggcagaggc agagcgcctg aacggaatgg gtctcgaccg agaccccaat
      721 ctcaccctgg tcgagagcag agtagagcag cagccttcgt cggttcgcct cacgcacctc
      781 ttcgagtatc gaccgctggg catccgcctc cagacagagc catacaccgg gtacgagtag
      841 ggcgggttag ttttccccgc aatgcccggg tacaccttcc acctgatccc gcatacccac
      901 tgggaccggg aatggtacct cccgcaaact gtcttccttc cgcggctgat cgccgcgctg
      961 gatgatctgt tcgatcgtct caccaccgaa ccagagctga cattcctgct ggacgggcaa
     1021 accgttctgc tggacgatta cctacgcgtt cgccccgaga gagctgcgca ggcggccgat
     1081 ctggtacggg gtggtcggct tcaagtaggt ccgtggtatg tgctcgccga cgagttgatc
     1141 ccttccggcg aatcgctgat gcggaacttg ctgctgggaa agagcgacag cgatgccgtg
     1201 ggcggccgca ccgatgtgct ctactctccc gacgcgttcg gccaccctgc cgtctggccg
     1261 cagctcgccg gcgagttcgg catccggttc ggtgttgtgt ggcgtggtct gggcggcgag
     1321 ccgggacagg agcacgatct ctaccgctgg cggggcccgg atgggcgcga ggttctgttg
     1381 tacca
//
LOCUS       DASRPQ010000422         1677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3191529, whole genome shotgun sequence.
ACCESSION   DASRPQ010000422 DASRPQ010000000
VERSION     DASRPQ010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1677
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3191529"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1456)
                     /locus_tag="VFD73_05025"
     CDS             complement(<1..1456)
                     /locus_tag="VFD73_05025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73379.1"
                     /translation="MEGQAGAMESLAVRWSAAIACLVLSIIAGAALVGPSASKASAWA
                     QQSTVDPEPLPPESRLNAVSCPTTTFCAAFGHDDGGVKELFHLWNGTEWKVGSSETPN
                     ELPADASCGSTTSCIVVGTDSAGAARAERWSAPAEGKPWGWTALTVPKPAESQELVLS
                     SVSCTSASACTAVGSYFDKTGRKLTLAERWNGTSWSIQTTANPASGNAELFGVSCTSS
                     TSCTAVGKQVSGTLAERWNGSTWSISTTPNPTGTGIRLREVSCPTTSFCLAIGMYGAL
                     QKTLAETWNGSAWTLVSSPNPTETGSTYLTDVSCPTTESCAATGYYFVGGGETRTLIE
                     RWNGSALSLQSSPNPEGKAVAQLSDVSCASASICASVGFSQTTTTGPAAGTLGERWNG
                     SAWSIQSTVNPEPLPPESRLTAVSCSTSSFCAAFGYDTSREKELFRVWNGTEWKVASV
                     WSGETLNRSPADASCSSTTYCIVVGSTPTGEVKSE"
BASE COUNT          276 a          532 c          555 g          314 t
ORIGIN      
        1 attccgactt tacttcgccc gtcggggtgc tgcccaccac gatgcagtag gtcgtcgagg
       61 aacaggaagc gtcagctggt gaccgattca gtgtttcgcc gctccagacg ctcgccactt
      121 tccattcggt cccgttccac acccggaaga gctccttttc gcgagaggtg tcatagccga
      181 aggcggcgca gaaggaggag gtcgagcagg agaccgcggt caggcgcgat tcgggaggaa
      241 gcggttcggg attgaccgtg gactggatcg accaggcgct accgttccag cgctccccca
      301 gtgtccctgc cgccggccct gtcgtcgtcg tctgagagaa gcccacgctc gcgcagatgc
      361 tcgcgctagc gcaggagacg tcgctcagct gggccaccgc cttgccttca ggattgggcg
      421 agctctgaag cgacagggcg ctgccgttcc agcgctcgat cagcgtcctc gtttcgccgc
      481 cacccacgaa gtaatagccc gtggccgcgc acgattcggt cgtcgggcag gaaacgtcgg
      541 tcaggtaagt gcttcctgtt tcggtcggat tggggctgga gacgagcgtc caggcgctgc
      601 cgttccaggt ctcggcgagg gtcttctgga gtgccccata catgccgatg gcgagacaga
      661 agctcgtggt cgggcaggag acctcgcgca gcctgatccc ggtgcccgtc ggattcgggg
      721 tggtggagat cgaccaggtg ctgccgttcc agcgctcggc gagggtgccg ctcacctgct
      781 tgccgacggc tgtgcaggac gtcgaggagg tgcaggaaac gccgaacagt tcggcgttgc
      841 cgctggcggg attggcagtg gtctggatcg accagctggt gccgttccag cgctcggcga
      901 gggtcaattt ccgtccggtt ttgtcgaagt agctccccac ggccgtgcag gccgaagctg
      961 acgtgcagga aaccgagctc agcacgagtt cttgagattc cgccggtttg ggaacggtca
     1021 gggcagtcca tccccacggt ttgccttctg ctggggcaga ccagcgttcc gcgcgggcgg
     1081 cgccagccga gtcagtaccc actacgatgc agctcgtggt cgagccacag gaagcgtcgg
     1141 ctggcagctc attcggggtt tcgctgctcc cgactttcca ttcagtgccg ttccagaggt
     1201 gaaacagctc ctttacgccg ccgtcgtcat ggccgaacgc ggcgcagaac gtggtggtcg
     1261 ggcatgagac cgcgttgagg cgcgattcgg gtgggagcgg ttcgggatcg acggtcgact
     1321 gctgcgccca ggcgctcgcc ttcgacgccg aaggtccgac gagggcggcg ccagcgatga
     1381 tcgagagcac aaggcacgcg attgcggcgc tccaacgaac agccaaagac tccattgccc
     1441 ctgcttggcc ttccacctaa cccctccctc gccgatgttt cccgttcggt caactacatg
     1501 agttgagcgg gggtcacact cccagagcgc cacttgcccg aaccttgcga tgtgcccccc
     1561 tttgcggaca ttcgcttggc aaatgtcaag ggcaagccgc gggctaactc ccctccaatc
     1621 ggatcgccag ctcgagctcg gtggcgcagc gctcgagcgg ctggccgagc ctctcct
//
LOCUS       DASRPQ010000423         1068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_48633, whole genome shotgun sequence.
ACCESSION   DASRPQ010000423 DASRPQ010000000
VERSION     DASRPQ010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48633"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..980)
                     /locus_tag="VFD73_05030"
     CDS             complement(<1..980)
                     /locus_tag="VFD73_05030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73380.1"
                     /translation="MCESDTCNSFVQTTAMARSVGQRVAIYVDTTAPAGGYTTADLDQ
                     VKTLFDQYLYPIDTTAFGRESDIDGNGVVIVLLTPQVNALSPGCNSTGRIILGYFFGA
                     DLLPKSSVNPGSNEAEVFYGLVPDPNNSSCTIDKAEANSRLPATFIHEFQHMISFNQH
                     VLIRNGSAEDTWLNEWLSHFAEELGGRLVPDQECPVTGSCEVEFLADGDVLNAFEYLA
                     SPEDFFLIEPGNSTGKLEERGANWLFVRWLADHFAADTILGTELTRALVATNQTGSAN
                     VAARTGVDFSTLVGEWQLTNYLDDLPGFPTTDPRLRYKSWNFRAIADANA"
BASE COUNT          205 a          311 c          344 g          208 t
ORIGIN      
        1 tcggcattgg cgtccgcaat ggctcggaag ttccagctct tgtagcggag cctcgggtcg
       61 gtggtgggaa atcccgggag gtcgtccagg taattggtca actgccactc ccctacgagg
      121 gtggagaagt ccacaccggt ccgggcggcc acgttggcac tcccggtctg gttcgtggca
      181 actaacgccc gggtgagctc ggtgcccaga atggtatcgg cggcaaagtg gtccgccagc
      241 cagcgaacga atagccagtt ggctccccgc tcctccagtt tccccgtgga gttgccgggc
      301 tcgatcaaaa agaaatcctc gggagacgcc aggtattcga aggcattcaa cacgtctccg
      361 tccgcgagga actccacttc gcaggagccg gtcaccggac actcctggtc agggaccagg
      421 cggccaccca gctcctcggc gaagtgagag agccattcgt tcagccaggt atcttcggcg
      481 ctgccgtttc ggatcagcac gtgctgattg aagctgatca tgtgctgaaa ttcgtggatg
      541 aacgtcgcag gcaaccggct gtttgcctcc gccttgtcta tcgtgcaaga ggagttgttg
      601 ggatccggaa ccagaccgta gaagacctcg gcttcattgg aaccgggatt gactgacgac
      661 ttgggaagca ggtccgctcc gaagaaatag cccaggatga tccgcccggt ggagttacac
      721 cccggactca gggcattcac ctgcggcgtc agcagcacaa tgactacgcc gttgccgtcg
      781 atgtctgatt cccggccgaa cgcagtcgta tcgatcggat agaggtactg atcgaacagg
      841 gttttcacct ggtcgaggtc ggcagtggtg tatccgccgg cgggtgcggt ggtgtcaacg
      901 tagatcgcca cccgctgacc taccgaccgc gccatggccg tagtctggac gaagctgtta
      961 caggtgtcgg attcgcacac gctgaatgtc cgcagttctc ccagcgccgg cggggctgct
     1021 gtggccgggt gaggggatgc gctgaacaga gccgaagacg gctcgcgg
//
LOCUS       DASRPQ010000424         5231 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2869722, whole genome shotgun sequence.
ACCESSION   DASRPQ010000424 DASRPQ010000000
VERSION     DASRPQ010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5231
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2869722"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..204)
                     /locus_tag="VFD73_05035"
     CDS             complement(<1..204)
                     /locus_tag="VFD73_05035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73381.1"
                     /translation="MRSIILSTALLAAFSVAGCGNDTTDAGQPLGRKLPPNGIDILMG
                     AQNKGTGAFTPNPLTIPLANGGVV"
     gene            complement(219..1526)
                     /gene="purD"
                     /locus_tag="VFD73_05040"
     CDS             complement(219..1526)
                     /gene="purD"
                     /locus_tag="VFD73_05040"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR00877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HZI73382.1"
                     /translation="MRSLVIGSGGREHALCWALRRENPDAELYCAPGNPGTAEIATNL
                     PIAADDLDRIADAADMYGIDLTVVGPEVPLARGLADRLRAEGRAVFGPSAAAAQIEAS
                     KAFAKQVMSDAGVRTAPSGAFTDLEPALAFVDRQSEPLVVKASGLAAGKGAIVCTTRS
                     EAAKAVRWLLDEGGLGDAGQTVVIESYLEGEELSVMAVTNGKDVELLPVAQDHKRLLD
                     GDTGPNTGGMGAYSPVSIAGPALLERVKRDILFPTLEQMQRLRAPFTGVLYTGLMIDP
                     SGIPWVIEYNCRLGDPEAQAILPLLSQGLTDSLWRAARGQPPARINVARGAAVTTVLA
                     SRGYPERPEKGAEIKVPDALPSGAIVFHAGTKRGEDGALRVDGGRVLTATGLGTTFLE
                     AQRISRQTAESIQYDGKVFRHDIGRREAARVQQRRPIGASQRV"
     gene            complement(1523..2539)
                     /locus_tag="VFD73_05045"
     CDS             complement(1523..2539)
                     /locus_tag="VFD73_05045"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HZI73383.1"
                     /translation="MSTSLPAVRPRQRFPEISAVSWEHPADRAALQSLRAIPGVDDII
                     RKVLGMLGGERGIRLLFQGNAVRIGPAQFPKLWHLHTEVTTTFDWNVVPELYVSQTPF
                     FNAGAYGIDTPFIVVHSAAVELLADDELRVLLSHELGHVMSGHALYRTIAAILAMVSL
                     GVLPVLAELVVLPVRLGFLEWSRKSELSADRAGLLGAQDIVAAQRLDMKMAGGGRGPG
                     FAAQLNVDAFMQQAHEYASSSEGMDVVYKLLSTLALTHPMHTVRAAELQRWVGTGDYD
                     RILRGEYVRRGNETEDRPWRDDVAAAGSYYAAEARELAGQLADAARRAAERARDAYKN
                     AQKS"
     gene            complement(2608..3780)
                     /locus_tag="VFD73_05050"
     CDS             complement(2608..3780)
                     /locus_tag="VFD73_05050"
                     /EC_number="2.5.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase"
                     /protein_id="HZI73384.1"
                     /translation="MTRILPHDHEHGFATRSVHAGQIVEPLAGAVMTPIYQTSTYVQE
                     GLGKHRGYEYARTQNPTREALERNVASLEGGTYGFAFGSGLAALDAVLKLFKTGDHIV
                     CGENVYGGSHRLMERVYGNLGLRVSFVDMREVGNIEQALTPATRMIYCETPTNPMMNL
                     IDLAAVGDLAQAHGYLYVVDNTFATPFFQRPLEHGADIVLHSTTKYLNGHSDMVGGLL
                     ITSRDDVAERLGFIQNAAGAVPGPMDCWLALRGIKTLPLRMRQHDANGRRIAEWLTHQ
                     RSVTKVYYPGLPSHPQHEIACRQMSGFGGMISLDLGEAGRARRFVESTRIFVLAESLG
                     GVESLIGHPASMTHASVPPSMRQAMGLTDSLIRLSCGVEDADDLIADLDGALRASA"
     gene            3907..4950
                     /locus_tag="VFD73_05055"
     CDS             3907..4950
                     /locus_tag="VFD73_05055"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HZI73385.1"
                     /translation="MSNNSLEGSATGCLIVDDDPQVRQVLTRIIATDGLAPLEASSGA
                     DALRVLKQVGEIPICISDIYMPEMDGVTFLREALQRYPDMGVIMLTGMAEVNTAVECL
                     KLGALDYISKPVLVEEVRARLRKALEKRRLLLENRFYQQSLELRVRDLDRKNRASLIN
                     GVQMLVHALEAKDAYTSGHSSRVSRYATTTAVRLGFTDDALEHVRLGGELHDIGKIGT
                     REAILNKPGPLTSGEFEHIKEHSALGEKILAPFLAQSPVVLRIVRSHHERIDGSGFPD
                     ALRGNRIPLEARIVAVVDAFDAMTTNRAYRPSLPTENAIEELRRCANVHFDADVVDAF
                     LSAHGNGSKLPIA"
     gene            4965..>5231
                     /locus_tag="VFD73_05060"
     CDS             4965..>5231
                     /locus_tag="VFD73_05060"
                     /inference="COORDINATES: protein motif:HMM:NF014877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73386.1"
                     /translation="MSETLMISVSGIRGHVGTDLTPELVARYAAAFGSWARTNGSTNR
                     PADRPPARPTDRPSIVLGRDARTSGAMFARAATAGLMSVGVDVVD"
BASE COUNT          903 a         1712 c         1678 g          938 t
ORIGIN      
        1 gaccacgccg ccgttcgcca atgggatggt cagcggattg ggagtgaacg cgccggtccc
       61 cttgttctgg gcgcccatca ggatgtcgat gccgttgggc gggagcttcc ggcccagcgg
      121 ctggccggca tcggtcgtat cgttgccgca ccctgcgact gaaaaagccg cgagcaacgc
      181 ggtgctcaaa ataattgaac gcatgtaacc tcctcccatc agacccgctg cgacgcaccg
      241 attggccgcc gctgttgcac gcgtgccgct tcccgccggc caatgtcatg gcggaaaact
      301 ttgccatcgt attgaatcga ttcggcggtc tggcggctga tgcgctgtgc ttccaagaag
      361 gtcgtgccca ggccggtggc agtcaacaca cgcccgccat ccacccgcag agccccatcc
      421 tctcctcgtt tggttccggc atggaagacg attgcccccg agggcaaggc atccggcact
      481 ttgatctccg ctcccttttc aggccgttcg ggatagccgc gtgacgcgag gaccgtcgtc
      541 acagcggctc ctctggcgac attgatgcgg gccggcggct gcccccgcgc cgctcgccac
      601 agagaatccg tgagaccctg tgagagcaac ggaagaatgg cctgcgcctc cggatcgccg
      661 agacggcaat tgtattcgat cacccaggga atgccggatg ggtcgatcat cagtccggtg
      721 tacagcaccc cggtgaacgg agcccgcagg cgctgcatct gctccagggt ggggaagagg
      781 atgtcccgct tgactcgctc cagcagtgcg ggaccggcga tcgacaccgg gctgtaggca
      841 cccatgccgc cggtattggg tccggtgtcg ccgtcgagca gccgcttgtg atcctgcgca
      901 accggcagga gctcgacgtc ctttccgttg gtcaccgcca tgaccgagag ctcctcgccc
      961 tcgagatagc tctcgatcac gacggtttgc ccggcgtcgc ccaggccacc ttcgtccaga
     1021 agccagcgga ccgccttggc cgcttccgac cgggtcgtgc agacgattgc acctttgccg
     1081 gcggccaatc cggacgcctt caccaccaaa ggctccgatt ggcggtctac gaacgccagg
     1141 gcgggctcca gatcggtaaa ggcaccactg ggagccgtcc gcacgcccgc gtcgctcatg
     1201 acctgtttgg cgaaggcctt gctcgcctcg atctgggccg cggcggcact gggaccgaag
     1261 acggcgcggc cctcggctcg cagcctgtcg gccagtcccc gcgccagcgg cacctccggg
     1321 ccgaccaccg tcaggtcgat gccatacata tctgcggcgt cggcgatccg atcgagatcg
     1381 tcggccgcga tcggaaggtt cgtcgctatc tccgcggtgc ccggattgcc cggtgcgcag
     1441 tagagctctg cgtccggatt ctcccggcgc aaagcccagc aaagcgcgtg ctctcggccg
     1501 ccacttccga tgaccagtga tctcacgatt tctgcgcgtt cttataggcg tcgcgggccc
     1561 gctctgccgc ccggcgggct gcgtcggcca gttggcccgc gagctcgcgc gcctcggccg
     1621 cgtagtaact cccggcagcg gcaacgtcgt cccgccacgg ccgatcctct gtctcatttc
     1681 ctcggcgcac gtactccccg cgcagaatcc ggtcgtagtc gccggttcct acccaccgct
     1741 gcagctcggc ggcgcgaacc gtgtgcatgg gatgcgtaag cgccagcgtg ctgagcagct
     1801 tgtacaccac gtccataccc tcgctgctgc tggcgtattc gtgagcttgc tgcatgaagg
     1861 cgtcgacatt gagctgagcg gcaaaccctg gtcctcggcc gccgccggcc atcttcatgt
     1921 cgagccgctg ggctgcgacg atatcctgcg ctcccagcaa tcccgcgcgg tcggccgaga
     1981 gctccgattt gcgagaccat tccagaaacc ccagtcggac cggcagtaca accagctctg
     2041 ccagcaccgg cagcacgcca agactcacca tcgccaggat ggcggcgatg gtgcgataca
     2101 aggcgtgtcc gctcatgacg tggcccagct cgtgggacag aagcacccgg agctcgtcgt
     2161 cggccagcag ctcgaccgcg gccgagtgga ccacgatgaa cggcgtgtcg atcccgtacg
     2221 cccccgcgtt gaagaaaggg gtctgcgaga catacaattc ggggaccacg ttccagtcaa
     2281 aggtggtggt cacctcggtg tgcaggtgcc acaatttggg aaactgcgcg ggcccgatcc
     2341 ggaccgcgtt gccttgaaac agcaaccgga taccgcgctc gccgcccagc atgccgagca
     2401 cttttcggat gatgtcgtcg acgccgggta tggcgcgcag actctgcagt gccgcccgat
     2461 cggcggggtg ctcccaggaa accgcggaga tttcagggaa acgttgacgg ggccggacgg
     2521 cgggaaggct ggttgacatg agaggctcga cgttggagac ccgggatcgt acgagttcct
     2581 ggggtgcggg tttcagactg tgacgcgcta cgcgctcgcc cgcagcgcgc catccagatc
     2641 ggcaatcagg tcgtccgcgt cctccacgcc gcagctgagc cgaatcagac tgtcggtgag
     2701 tcccattgcc tggcgcatgc tcggcggcac ggatgcgtgg gtcatggatg caggatggcc
     2761 gatcaggctc tcgaccccgc cgagcgactc tgccagcacg aagatccggg tactctcgac
     2821 gaaccggcgg gcgcgcccgg cctcgcccag atcgagggag atcatgccgc cgaatccgct
     2881 catctgccgg caggcgatct cgtgctgtgg atgcgaaggc aaccctggat agtagacctt
     2941 ggtgacggaa cgctggtggg taagccactc ggcgatccgg cggccgttcg cgtcgtgctg
     3001 acgcattcga agcggcagcg tcttgatgcc gcggagcgcg agccagcaat ccatcggacc
     3061 cggaacggcg ccggctgcgt tttgaatgaa gccgagccgc tcggcgacat cgtcgcggga
     3121 ggtgatcaag agcccgccca ccatatcgct atggccgttg aggtatttgg tggtcgagtg
     3181 gagaacgatg tcggccccgt gctccagcgg ccgctggaag aagggcgtag caaaggtgtt
     3241 gtccaccacg tacagatagc cgtgggcctg ggcgaggtct cccaccgcag cgaggtcgat
     3301 caggttcatc atggggttgg tgggcgtctc gcagtagatc atccgggtgg ccggcgtgag
     3361 cgcctgctcg atgttgccga cctcccgcat gtcgacgaag ctcacgcgca gccccaggtt
     3421 cccgtagacc cgctccatca accgatgact gcccccgtag acgttctccc cacagacgat
     3481 atggtcgccc gtcttgaaca gcttcaggac ggcatccagc gcggccaggc cggaaccgaa
     3541 tgcaaatccg taggtcccac cttccaggct cgcaacgttc cgctccagcg cttcccgcgt
     3601 cgggttttgg gtgcgggcat actcgtatcc ccgatgcttg cccagtcctt cctgcacgta
     3661 ggtggaggtc tgataaatcg gcgtcatcac cgcgccggca agcggctcca cgatttgccc
     3721 ggcgtgcacc gaccgggtgg cgaagccgtg ctcatgatcg tgtggaagaa tccgggtcat
     3781 cgggcctgcg gtgaggggtg tggagaagcg taatcaggct cggtgctggg agctaggagc
     3841 ttgcagctaa aatctgtggc tggtagctcc tagctcctgg atggtagctc tatttagttt
     3901 cgaaccgtgt cgaacaattc cctggaaggc tccgcaaccg gctgcctcat cgttgacgac
     3961 gacccccaag tacgtcaggt tctgacccgg atcatagcga cggatgggct ggctcccctg
     4021 gaggcttcct ccggggcgga tgcactccgt gtactcaagc aggtgggcga gatccccatc
     4081 tgcatctcgg acatctatat gccggagatg gatggggtca cctttctgcg ggaagcgctg
     4141 cagcgctacc cggacatggg tgtcatcatg ctcaccggca tggcggaggt gaacacggca
     4201 gtcgagtgcc tcaagcttgg ggccctcgac tacatctcca agccggtgtt ggtcgaagag
     4261 gtccgggccc gactccgcaa ggcactggag aaacgccgtc tgctgctgga gaatcgcttc
     4321 tatcagcaga gtctggagct gcgggttcgc gatctcgatc ggaagaatcg ggcaagcctg
     4381 atcaacggag tgcagatgct ggtgcacgcg cttgaagcca aggacgcata caccagcggc
     4441 cactccagcc gggtgagtcg atatgccacc acgacagcgg tccggctcgg gtttaccgat
     4501 gacgcgctgg aacatgttcg actgggaggg gagctgcatg acatcgggaa gatcgggacg
     4561 cgggaagcta tcctgaacaa gccgggacca ctcacctcgg gggagttcga gcacatcaag
     4621 gagcactcgg cgttgggcga gaagatcctg gcgccctttc tggcccagtc tccggtggtc
     4681 cttcgcatcg tacgaagcca tcacgagcgc atcgacggca gcggctttcc cgacgcgttg
     4741 cgggggaacc gaattcccct cgaggcccgc atcgtcgccg tggtcgacgc gttcgatgcc
     4801 atgaccacga accgtgccta ccggccctcg ttgccgacgg agaacgccat cgaggagctg
     4861 cgtcggtgcg ccaacgttca cttcgatgcc gatgtggtgg acgccttcct gagtgcccac
     4921 ggtaacggct ccaagctccc catcgcttga gcctgcgtcg atccatgtcc gagaccctga
     4981 tgatcagcgt ctccgggatc cggggacacg tgggtaccga tctcacgccg gaactggtgg
     5041 ctcgctacgc cgccgccttt ggctcatggg ctcgtactaa cggctcgacc aaccgaccgg
     5101 ctgaccgacc gcccgcgcgc ccgactgacc gtccgtccat cgttctcggc cgcgacgccc
     5161 gcaccagcgg agcgatgttc gcccgcgcgg ccaccgcggg actcatgtcg gtgggcgtgg
     5221 atgtggtgga t
//
LOCUS       DASRPQ010000425         1108 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3495953, whole genome shotgun sequence.
ACCESSION   DASRPQ010000425 DASRPQ010000000
VERSION     DASRPQ010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3495953"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            266..955
                     /locus_tag="VFD73_05065"
     CDS             266..955
                     /locus_tag="VFD73_05065"
                     /inference="COORDINATES: protein motif:HMM:NF024790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M50 family metallopeptidase"
                     /protein_id="HZI73387.1"
                     /translation="MLALSLELAQHQLEQSPALSSVPIGEPIGIIVLLGFAVEGIWRL
                     AMHIGVIAHEGAHALAGWSVGRKVNSVKLNRDGSGETVTQGPATGPGRVLTSFAGYLG
                     PSLSGLGAAALLAHHQVRAVLIVAGIALFLMLLLIRNSFGCVSVLLNGGLIFLVLRYG
                     NVEIETIAAYALSWFLLLSGVRFVLMPGSWRGDSETLSRNTHIPRVVWIALWLAGAVL
                     ALWIGGHLLVR"
BASE COUNT          177 a          339 c          362 g          230 t
ORIGIN      
        1 cagctcagtc acattggcca tgcctatttc taaccgatgc tgcccaggcc agcagccacc
       61 ggctgcctgg ccgcatagcc gtcatggccc cagtgcccct cggtgctcgc tcgcgcatga
      121 ggaccgcttg gggcacttgt caagacctcg ctccggtgtt tggctgataa gtgggctccg
      181 caggggaact cttgatggcg cgggtgcggg aaagtgttgc ccgccgttat ccccctccta
      241 gccctcagag ggtccggggg gcgaaatgct ggcactgtcg ctggaattag cgcaacacca
      301 gttggagcag agccccgcgc tgtcgtcggt accgatcggt gagcctatag ggataatcgt
      361 tctcctcggg ttcgcagtgg aaggcatctg gcggctcgcg atgcacatcg gtgtgatagc
      421 gcacgagggc gcgcacgcac ttgccggctg gagcgtggga cgcaaggtca actcggtcaa
      481 actgaacagg gacggcagcg gggaaaccgt cacccagggg cctgcgaccg gcccgggcag
      541 ggtacttacc agcttcgccg gctacctggg gccaagcctg tcgggccttg gcgcggcggc
      601 cctcctggcg caccaccagg tgcgggcggt cctgatcgtg gcaggaatcg ccctcttcct
      661 catgctgctt ttaatccgta attcctttgg ctgcgtctcg gtgctcttga acggtgggct
      721 cattttcttg gtcctgaggt acgggaacgt tgagatcgag accattgccg cctacgcgct
      781 cagctggttc ctgcttttgt ccggtgtccg tttcgttctt atgccaggca gctggcgggg
      841 agattcggaa accctgagca ggaacactca catcccacga gtcgtctgga tcgccctctg
      901 gctggcaggt gctgttctcg cgctatggat cggtggtcac ctcctcgtcc gatgaccccc
      961 gcactcacgg ctagtacgtt ggctgatata ttggccaacg tactaggagg ctggatggca
     1021 cctcgtggaa cggaacggga cggcgcgggc ggccaagatg tgctgcgccg cgccggcgat
     1081 gcgtcggtcc tgatactgac gagcctgg
//
LOCUS       DASRPQ010000426         1109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3192411, whole genome shotgun sequence.
ACCESSION   DASRPQ010000426 DASRPQ010000000
VERSION     DASRPQ010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3192411"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1029)
                     /locus_tag="VFD73_05070"
     CDS             complement(<1..1029)
                     /locus_tag="VFD73_05070"
                     /inference="COORDINATES: protein motif:HMM:NF012945.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73388.1"
                     /translation="MVQPERMELMLLGFGQIGRALASLLTKVKRPGLQLRVCAVLDRS
                     GFIFDPAGLSSKQLASIAALKKTGRTIAQHPDGTPATAEDAVTQIAQHALTRPVLVDL
                     TAGDTAPVLQQGLLHGMDLVLANKRPLADRRAVSDALWQVARARGWRILHEATVGAGL
                     PIIDTFHKLTESGDRVERIEGLLSGTLGYVLSEVSNGVAFSKAVRTAMGLGYSEPDPR
                     EDLSGMDVARKALILARLLGYRGELRAELVESLVPPWAQALSLDQFLHRLKELDASWR
                     KRAERAQKHGAVLRYVAAVTARRIAVGVQAVPRSSPFAAIHGSDNQLVFTTSRYQANP
                     LVITGPGAG"
BASE COUNT          200 a          362 c          364 g          183 t
ORIGIN      
        1 gcctgcgccg ggcccggtga tcaccagtgg attggcctgg tagcgtgagg tcgtgaacac
       61 gagctgattg tccgatccgt gaattgcggc gaatgggctg gacctgggca ctgcctgaac
      121 cccgacagcg atgcggcgag ccgtcactgc agcgacgtac cgaagcaccg ctccgtgctt
      181 ttgtgcgcgc tccgcccgct tgcgccagga ggcgtccaac tctttcagcc gatgaagaaa
      241 ctgatccagc gacaaggcct gggcccacgg cggcaccagg gactcaacca actcggctcg
      301 aagctctccg cggtagccga ggagccgagc caggatcaac gccttccgcg cgacgtccat
      361 tccagagaga tcctcccgtg ggtccggttc ggaatagccc agacccatgg cggttctgac
      421 cgccttggag aacgccaccc cattcgagac ctcgctcagg acatacccca gcgtgccgga
      481 gagcagtcct tcgatccgct ccacgcgatc gccggactcg gtcagcttgt ggaaggtgtc
      541 gatgatggga agcccagctc caacggtggc ctcgtgcagg atgcgccagc cgcgcgcccg
      601 cgccacctgc cagagagcat cgctcaccgc ccggcgatcg gctagtggac gtttgttggc
      661 caggaccagg tccatgccat gaagcaagcc ctgctgcaag accggagcag tgtcgccggc
      721 ggtgagatcg accagcaccg gacgggtgag cgcgtgctgg gctatttggg taaccgcgtc
      781 ctccgcggtt gcgggcgtgc catcgggatg ctgggcaatg gtgcgcccgg ttttcttgag
      841 cgcggcgata ctggcaagct gctttgaact cagcccggcg ggatcgaaga tgaagccgga
      901 tcggtcgagc acggcgcaaa cccggagctg cagtcccgga cgtttgactt tggtcaggag
      961 ggatgccagc gctcgcccga tctggccaaa gccgaggagc atcagctcca ttcgctccgg
     1021 ctgaaccacg gcacctcccg caatgcggga cagctggaaa gccgtgtgga tccgccgctg
     1081 ggcttctgcc gcgtccgcgg cagagacca
//
LOCUS       DASRPQ010000427         2310 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_989485, whole genome shotgun sequence.
ACCESSION   DASRPQ010000427 DASRPQ010000000
VERSION     DASRPQ010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2310
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_989485"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..674)
                     /locus_tag="VFD73_05075"
     CDS             complement(<1..674)
                     /locus_tag="VFD73_05075"
                     /inference="COORDINATES: protein motif:HMM:NF015699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HZI73389.1"
                     /translation="MPYSMTGFGAAEGPVAGRRLRVEIRTVNHRYFNLSAKLPSDLTA
                     MEVELRERLRRDFERGHITVQARWTEAADADVGFAIDLHRARLVAARLRELQAALGLG
                     GEVTLDLVARQPDVVSHAGNGTSEIAWSEVEPVVARAGQECRSMRAREGEALTQELNH
                     RLDQLEQSVQRIAALAPARLVRERDRLRTAVGQLLDGRTVDEERLSQELAFLADKLDI
                     TEELVR"
     gene            807..1694
                     /locus_tag="VFD73_05080"
     CDS             807..1694
                     /locus_tag="VFD73_05080"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HZI73390.1"
                     /translation="MTVPQTAEPLVTAPRKPRDEEIDVYGVTHPGKVRSENQDHFLIC
                     SLRKQVDIRMTSLPEADRLMADPQRLAFVAMVADGVGGGAKGAEASRFALEAVMQYVT
                     NSMQSYYAANRQDEGRLIHAIEEGALQCHAELVRRGQEDPDYRGMATTLTLYLGVWPK
                     AYMLQVGDSRCYLLRNDALTQITRDQTMAQELIDLGVITRTDAASTRLANSLSSSLGG
                     RQTEPVVTRFDMDWNTVVLLCSDGLTRHVSDEQIRERLRSMTSAQQVCQELLQDALEG
                     GGTDNITIVVGRPLAETGS"
     gene            1778..>2310
                     /locus_tag="VFD73_05085"
     CDS             1778..>2310
                     /locus_tag="VFD73_05085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73391.1"
                     /translation="MYPRRPLSPDVLRICLPLLLTALPQSFIQAQTVTAVSAHRASPP
                     GPDRSAPAWTLKTKQDIRWQQVTPAGTLLISTDGSLSGIDMERGQVIWEKPELRGLDV
                     DSVRIVDGSLLMEAARPGLLEVFDPVTGAVVFDSRKLGLAEIVTRRVLPQTGTLLIHG
                     RRASGPPVVALYDLTTG"
BASE COUNT          426 a          779 c          695 g          410 t
ORIGIN      
        1 aagcggacca gctcctcggt gatgtccagc ttatccgcca ggaaggcgag ctcctgactc
       61 aagcgctcct cgtcgactgt gcggccgtcc agcagctgcc ccaccgcagt acgaagccgg
      121 tcccgctccc gcaccagccg ggccggcgcc agcgccgcga ttcgctgcac cgactgctcc
      181 agctggtcga gtcggtgatt gagctcctgg gtcagcgcct cgccttcacg ggcccgcatc
      241 gagcggcatt cctgacccgc gcgcgccacc accggctcga cctcgctcca ggcgatctcc
      301 gaggttccgt tgccggcatg gctcaccacg tccggctgtc gggcaaccag atccagagtt
      361 acctcaccac ccagccccag cgccgcttgc agttcgcgca gccgagcggc caccagccga
      421 gcacgatgca gatcgatggc gaacccgacg tcggcatctg ccgcctcagt ccagcgtgcc
      481 tgaaccgtga tgtgccctcg ctcaaaatcc cgacggagcc gctcgcgcag ctcaacttcc
      541 attgcagtga ggtcgctggg tagtttggcc gacaggttga aatagcggtg gttgacggtt
      601 cggatttcga cccggagccg ccggccggcg accggtcctt ccgcagcgcc gaacccagtc
      661 atgctgtacg gcaagcgtcc tcccggaagc cagaacagcc cgaaaactta gtctggaaat
      721 ggctgtttcg gtaggtgaat cggacagcgc tggcaacccg cacaagattg cgctaattgg
      781 agcaaccacc aaggagtttc cccgcgatga ccgttccgca gaccgccgag ccgctggtga
      841 cggccccgcg caagccgcgc gatgaagaga tcgatgtcta cggagtgacg caccccggca
      901 aagtgcgcag tgagaatcag gaccattttc tcatttgctc gcttcgcaag caggtcgaca
      961 ttcggatgac cagcctacct gaggctgatc gcttgatggc cgatccgcag cggctcgcct
     1021 tcgtcgcgat ggttgccgac ggcgtcggag gaggggcgaa gggtgccgag gccagccggt
     1081 ttgcactcga agcggtcatg caatacgtca ccaacagcat gcagagctac tatgccgcca
     1141 accgccagga tgagggaagg ctgatccacg ccatcgagga gggtgctctt cagtgtcacg
     1201 ccgagctggt gcggcggggg caggaggacc cagactatcg cggtatggcc accacgctca
     1261 cgttgtacct cggcgtttgg ccgaaagcct atatgctcca ggtgggcgac agccgctgct
     1321 acctcctgcg caatgacgcg ctcacccaga ttacccgaga tcaaaccatg gctcaggagc
     1381 tcatcgatct cggagtcatc acccgcacag atgctgccag cacgcggttg gccaactcgt
     1441 tgtcaagttc cttgggtggc agacagactg agccggtggt aacgcggttc gacatggact
     1501 ggaacacggt ggtacttctc tgcagcgacg gactgacccg gcacgtgtcg gatgagcaga
     1561 tccgcgagcg cctcaggtcg atgacatcgg cccaacaggt ctgccaagaa cttttgcagg
     1621 acgcgctcga aggcggtggt accgacaaca tcaccatcgt ggtaggccgg cccctggccg
     1681 aaacaggctc ttaactccca gcccttagct cccctggcac ggcatctgcc ttcaaccggc
     1741 agaccttttt accccgacca ttgccagggg agttgccgtg taccctcgcc gcccgctgtc
     1801 cccagatgtg ctgcggatct gcttaccgct cctgctgacc gctctgcccc agtcgttcat
     1861 tcaagcacag acggttactg ccgtatccgc acatcgagcg agtcctcctg gtcccgaccg
     1921 ctcggccccc gcctggacgc tcaagaccaa gcaggacatc cgctggcagc aggttactcc
     1981 ggctggtacc ctgctgatct caaccgacgg ttcgttatcg ggcatcgaca tggagcgggg
     2041 ccaggtcatc tgggagaagc ccgagctcag aggactcgac gtcgatagcg tcaggatcgt
     2101 cgacggatcg ctgctgatgg aggcggctcg gccgggcctc ctggaagttt tcgatccggt
     2161 caccggcgca gtcgtgttcg actcccggaa gctgggcctc gcggaaatcg tcacccgccg
     2221 cgttctgcca cagactggta cgctgctgat ccatggccgc cgcgcctcag gaccgccggt
     2281 tgtcgcgctg tacgacctga ccaccggtga
//
LOCUS       DASRPQ010000428         1527 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1937641, whole genome shotgun sequence.
ACCESSION   DASRPQ010000428 DASRPQ010000000
VERSION     DASRPQ010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1937641"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..309)
                     /locus_tag="VFD73_05090"
     CDS             complement(<1..309)
                     /locus_tag="VFD73_05090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73392.1"
                     /translation="MRRLRIGILDLVTKSPNPSLYGRVMNANLASIMPQVLGVWCEQE
                     GHDVRVVCYTGMENLLEELPPDLDLVFVGAFTQSAQLAYALSNYFRRSGAVTVLGGPH
                     A"
     gene            complement(421..1347)
                     /locus_tag="VFD73_05095"
     CDS             complement(421..1347)
                     /locus_tag="VFD73_05095"
                     /inference="COORDINATES: protein motif:HMM:NF039905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HZI73393.1"
                     /translation="MGWTAIVLNDSSGSGDGAKSAQQLSEIFAEAGREARITVARGGD
                     QLRTAMKEAVKGRCETLVAGGGDGTINTAASELVDSDIPLGVIPLGTLNHFAKDLGIP
                     IDLAGAAKVVLEGARCQVDVGEVNGRVFLNNSSLGAYPAIVRLRDRYQASGWGKWLAA
                     LWAGLVVLRRNPFMGVRIEAEGETILRRTPLVFVGNNEYQMTGLQAGSRKSLTTGRLA
                     VYVLHAERRSGLLRLAAQILLKGAEVKELDLLSVETATVETRRPLVQVALDGEVVSSK
                     SPMSYRIKPGALAVFVPQGTPACYPEGSMTSY"
     gene            complement(1348..>1527)
                     /locus_tag="VFD73_05100"
     CDS             complement(1348..>1527)
                     /locus_tag="VFD73_05100"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HZI73394.1"
                     /translation="VLLWVCTIALILLIGFSRVYLGVHYPSDVLAGYAVAVVWVTAVA
                     LGDRLASHRRRARRV"
BASE COUNT          288 a          510 c          471 g          258 t
ORIGIN      
        1 cgcatggggc ccgccaagca ccgtcaccgc gccactgcgc ctgaagtagt tgctcagggc
       61 ataggcgagc tgggccgact gggtaaaggc gcccacgaag accagatcga ggtccggtgg
      121 aagctcttcc agcaggttct ccatcccggt gtaacacacc acccggacgt cgtgtccctc
      181 ctgctcacac cagacaccga gcacctgggg catgatgctc gccaagttgg cgttcatcac
      241 tcggccgtac agcgatggat tggggctttt tgttacgaga tcgagaatgc cgatgcggag
      301 tcggcgcatt gatggccttt gtaggcagaa ttggccattt cctgggctga accgcaggcg
      361 cgggtgcggg agcccgtaaa ggaggaacga ccgaaaggac tgcaggaatt gtacaactgg
      421 ttaataagat gtcatggacc cctctggata gcaagcgggg gttccttgtg ggacgaaaac
      481 cgctagggcc ccaggtttga tacggtagga cataggcgat tttgatgata ccacctcgcc
      541 gtcgagcgcc acctgcacca gcggccggcg ggtttccacc gttgcggtct cgaccgagag
      601 cagatccagt tccttcacct ccgccccctt cagaaggatt tgcgccgcca gccgcagcag
      661 gccggagcgc cgttcggcgt gaaggacgta cacggcgagc cgtccggtgg tgagcgactt
      721 cctcgatccg gcctggagcc cggtcatctg gtactcgttg ttccccacga acaccagcgg
      781 agtccggcgg aggatggtct ctccctccgc ctcgatccgg actcccatga agggattacg
      841 ccggaggacc accaggccgg cccagagcgc ggcaagccac ttgccccagc cactggcctg
      901 gtaacgatcc ctgagccgga cgatcgcagg ataggcgccg aggctcgagt tattcaggaa
      961 gactcgcccg ttgacctctc ccacgtcgac ctggcagcgc gctccctcga gcaccacctt
     1021 cgccgccccc gcgaggtcga tgggaattcc caggtccttg gcaaaatgat tcagggtgcc
     1081 gagcgggatc acgccgagag ggatgtcgct atccaccagc tcagaggcgg cggtgttgat
     1141 cgttccatcc ccgccgccgg cgaccagcgt ctcgcaccgc cctttcacag cctccttcat
     1201 cgccgtccgc agctgatccc ctccccgggc gacggtgatg cgggcctctc tgccggcctc
     1261 ggcaaagatc tcgctcagct gctgcgcgga cttcgcgccg tcgcctgagc cggaggagtc
     1321 gttgagtacg attgcggtcc accccactca gaccctccgt gcccgacggc ggtggctcgc
     1381 caaccgatcc ccgagggcga cagccgtcac ccacaccacc gcgacggcgt agccggcgag
     1441 cacgtcactg ggatagtgca caccgagata gacccgggag aacccgatca gcaggatgag
     1501 agcgatggtg cacacccaca gcaggac
//
LOCUS       DASRPQ010000429         1162 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1937849, whole genome shotgun sequence.
ACCESSION   DASRPQ010000429 DASRPQ010000000
VERSION     DASRPQ010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1937849"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(92..793)
                     /locus_tag="VFD73_05105"
     CDS             complement(92..793)
                     /locus_tag="VFD73_05105"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HZI73395.1"
                     /translation="MSLTPVAPEISVVIPVHNGERYLAESIRSVLDQGHAALELLVID
                     NGSTDATADVVRTFSSVRYFHLAEKGVSKALNYGLEQCRGAFLAFLDADDVWPPNRLA
                     IQLDAFTRNPTVEMVFGYVEQFISPELEESAKSKLTIRDRLLPGRHRGCMLIRKESFW
                     KVGRFEPSIEYGEFIDWYMRAEEQEIRELMLPNVLTLRRIHGGNLGFTDRNKRVEYAR
                     ALKRGLDRRRRLSKE"
     gene            complement(790..>1162)
                     /locus_tag="VFD73_05110"
     CDS             complement(790..>1162)
                     /locus_tag="VFD73_05110"
                     /inference="COORDINATES: protein motif:HMM:NF017239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PqqD family protein"
                     /protein_id="HZI73396.1"
                     /translation="NGNYYSLSQSATVIWAGIQERATLERLQDHLHRRYSGQTESMGR
                     DLAQLIQALETEQLITRRSAAELPAGAEADPAEAEVTDQRETYQPPLFERFTDMGDLL
                     LLDPVHETEDEKGWPHAKGTA"
BASE COUNT          201 a          361 c          355 g          245 t
ORIGIN      
        1 gcccgcgcaa ccggcgtggg ttgggtggca gcgctcagca gccagtcttc tgcgggagta
       61 aagtgagggt ggctggagcg aatcttggcc ttcattcctt gctcaagcgc cgcctgcgat
      121 ccaggccccg cttgagtgcc cgcgcatact cgacccgttt attccggtcc gtaaatccca
      181 gatttcctcc gtggatgcgc cgcagggtga ggacgttggg cagcatcaac tcccgaattt
      241 cctgctcctc ggcgcgcatg taccagtcga tgaattctcc atactcgatg gacggctcaa
      301 atcgcccaac tttccagaaa ctctccttcc ggatgagcat gcagccacgg tggcgaccag
      361 gcagcagccg gtctctgatg gtcagcttcg acttggccga ctcctccagc tcgggcgaga
      421 tgaactgctc cacgtagccg aataccattt cgactgtagg atttcgggtg aacgcgtcga
      481 gctgtatcgc cagtctgttg ggtggccaca catcgtcggc gtcgagaaag gccaggaacg
      541 ctcctcggca ctgctccaga ccatagttca gcgctttgga gacgcctttc tcggcgaggt
      601 ggaaatagcg tacggacgag aatgtccgca ccacgtcggc cgtggcatcg gtggatccgt
      661 tgtcgatgac gagaagttcg agcgcggcat ggccctggtc cagcacgctt cggatgctct
      721 cggcgagata ccgctcccca ttgtgcacgg gaatcacgac gctgatctcg ggcgcaacgg
      781 gagtcagact cacgcggtac ccttggcgtg cggccagccc ttctcatcct ccgtctcgtg
      841 gacggggtcc agcaagagca ggtcacccat atcggtgaag cgctcgaaca aggggggttg
      901 gtacgtctcc ctctggtcgg tgacttctgc ctccgccgga tctgcctcag ctcccgcggg
      961 tagctcggca gcggaccggc gggtaataag ctgctccgtt tccagtgcct gaatcagttg
     1021 cgcgaggtcc cgccccatgg attcggtctg gccggaatac cgtctgtgca ggtgatcctg
     1081 tagccgctcc agcgtggcgc gttcctggat accggcccag atgaccgtcg cgctctggga
     1141 caggctgtag taattcccgt tt
//
LOCUS       DASRPQ010000430         2029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2569121, whole genome shotgun sequence.
ACCESSION   DASRPQ010000430 DASRPQ010000000
VERSION     DASRPQ010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2569121"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(676..>2029)
                     /gene="ltrA"
                     /locus_tag="VFD73_05115"
     CDS             complement(676..>2029)
                     /gene="ltrA"
                     /locus_tag="VFD73_05115"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: protein motif:HMM:TIGR04416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZI73397.1"
                     /translation="QDGITTEQAKGRTLRWQPLLPNLRRVNEAARRSGRTRFTALLHH
                     VDVAALERAFRRQRRAASPGVDGVTVAEYEQALESNLQNLHDRVHSGQYWPQPVRRTY
                     IPKGDGGQRPLGIPALEDKIVQGAVAEVLNAVYEADFLGFSYGFRPGRSPHTALATLE
                     QALMTQRVNWVLDLDIRTFFDSVDPGWLMRMLRHRIADPRILRLIERWLRAGVLESGR
                     WEPGEVGVPQGSGISPILANVFLHYVVDLWTHQWRRHRAAGQVIMCRYADDLVIGCQY
                     GTDGRELLAALTQRLAQFGLSVHEGKTRLIAFGRFAAERRAAAGQRRPETFNFRGFTH
                     YCGKTRNGRFMVKRKTQATRIVRKLKALREDMLRRMHTPVREQHRWLCQVLRGHYQYY
                     GVIFNYNSLRAFKDCVVRLWRKTLGKRSQKGRVTWASYSRLLAALPLPEPVIHQAWHR
                     "
BASE COUNT          329 a          701 c          587 g          412 t
ORIGIN      
        1 acgtcgacgt gatgcagcag tgccgtgaac cgtgttcgac cagatcgtct ggccgcctca
       61 ttcacacgcc ggaggttcgg cagcaagggt tgccagcgca gtgtccggcc cttcgcctgt
      121 tccgtcgtga tcccgtcctg ccgctccctt ctctccatca cctcgtttcc ttcggcgact
      181 tcagcgatac tatggagcgg tccgactccc atccgcgatg cggcgtcctt tggttgtccc
      241 tcgttcgccg cccccggcgg tgaccagccg ccggatgctg atgggcctca taggttccgg
      301 tatgtgcctt tcggacgtga cgtgtcctca gcccccggcg gagcatccgc tctctcgcat
      361 aacgagaacg gctgtgctgc tttcgctggt gcgggcgcca gctctgcctc cgcgacatgc
      421 ctatttcggg agtcaatccc ataccccgta cgaccgctgt ctacgcttcg gaccccgcgt
      481 tgccgcgacg cccgcaagac tcgctcccgt cccgcttgct cagctttgga cggaccagac
      541 ttgcactggc aagctcatac cggcttctcc tatcgcacgt cgggtagcgc agccattact
      601 ggcttttgcc cccacagatc ccaccgtgcg gcgttaccgc agtgggctct tcaggacgga
      661 cctgaggcgg attgatcatc ggtgccaagc ctgatggata accggttcag ggagcggcaa
      721 ggcggccagg agccggctat aggacgccca ggtcacgcga cccttctggc tgcgcttgcc
      781 gagtgtcttg cgccagagcc tgacgacgca gtccttgaac gcgcgtagtg agttatagtt
      841 gaagatgacc ccgtagtact gatagtgacc tctcagcact tggcatagcc accgatgctg
      901 ctcccgaacc ggggtatgca tccgccgcag catgtcctct cggagcgcct tcagctttcg
      961 cactatgcgt gtcgcttgcg tcttccgctt gaccatgaac ctcccgtttc tggtcttccc
     1021 gcaataatgc gtgaaccccc gaaagttgaa ggtctccggg cgccgttgcc cggcggccgc
     1081 tcggcgctcg gcggcgaacc gcccgaacgc gatcagccgg gtcttgccct cgtggaccga
     1141 caggccaaat tgcgccagcc tttgtgtcag cgctgcgagg agctctctcc catccgttcc
     1201 gtactgacag ccaatcacca ggtcatccgc ataccgacac atgatgacct gcccggctgc
     1261 tcgatgtcgc cgccattggt gtgtccagag gtcgacgaca taatggagaa agacgttcgc
     1321 aaggattggg ctgatcccag atccttgcgg cacccccacc tcccccggtt cccatcggcc
     1381 gctctcgagg acgccggccc tgagccaccg ctcgatcaag cggaggatcc gggggtcagc
     1441 aatcctgtgc ctcaacatcc gcatcaacca tccggggtca acggaatcga agaaggttcg
     1501 gatgtcgaga tcgagcaccc agttcacacg ttgcgtcatc agggcctgtt cgagggtcgc
     1561 caaggccgtg tgggggctcc gtcccggccg gaagccataa ctgaagccca gaaaatcggc
     1621 ctcgtagacg gcgttcagca cctcggccac cgccccttgg acaattttgt cctcaagcgc
     1681 gggtatgccg agaggccgct ggccaccgtc gcctttcggg atatacgtgc ggcgcaccgg
     1741 ctgcggccag tactgcccgc tgtggactcg gtcgtgcaga ttctggagat tgctctccaa
     1801 cgcctgctcg tattccgcca ccgtcacccc atcaaccccg ggactggctg cgcgccgctg
     1861 ccgccggaac gccctttcga gcgcggcgac gtcgacgtga tgcagcagtg ccgtgaaccg
     1921 tgttcgacca gatcgtctgg ccgcctcatt cacacgccgg aggttcggca gcaagggttg
     1981 ccagcgcagt gtccggccct tcgcctgttc cgtcgtgatc ccgtcctgc
//
LOCUS       DASRPQ010000431         1522 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4437997, whole genome shotgun sequence.
ACCESSION   DASRPQ010000431 DASRPQ010000000
VERSION     DASRPQ010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4437997"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1018..>1522)
                     /locus_tag="VFD73_05120"
     CDS             complement(1018..>1522)
                     /locus_tag="VFD73_05120"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HZI73398.1"
                     /translation="NAGAHPLLRPLHKYSWETFSSNWEVDVRHVFNWTREALLAPLDP
                     GSVVVAVSSGAALQGSSIGGGYSGAKATILFMTGFAAEESDRAKLGIRFVSAVPGLNA
                     GTALGHAAATAHAQREGVSLDRFLQRLDPTLTPERVGQEIAALATGSEFDSGAYRVTA
                     NGLTPVD"
BASE COUNT          266 a          466 c          525 g          265 t
ORIGIN      
        1 cgagtacgcc atcgagcggg aggggcagcg ggtggccgag gtgtccaagc ggtggttccg
       61 ggtccgtgac acctacgggg tggaggtagc gccgggtgag aacgacatcc tggtcctggc
      121 gaccgccgcg gtgatcgaca cgatggccca tccggaccgg tagcccagga tccgcagcca
      181 gtcacaatcg cacgtgagcg gtaccttcgc ggcccagctc ccaggtagcg ccatcgaggg
      241 atcagcaggg ataaggaccg tgacggcggg cgctgcatga ccggtagtgg atgaatccgg
      301 gggggaggag ttcctggagc cagtgacaaa ccaagtgact acggctccag atagccacag
      361 gctcagcgcg acttacccag acaccgatat ccctctgacc tccagtaatg cgacctcatg
      421 cgacgtcacc agacggtgtc ggcctgcatg gtaaggagaa ggtctacggt tcgattccgt
      481 aacggggctc caccgggctt agcctgcgag gccaggtcaa aagctcactg gacagctctc
      541 atcctacgct gcggatggga gctgttgccg tgttgggagg aatttgggag atcgcctccc
      601 gcgctctcgc ctggccgccg atcgaccgtg acgccgtgcc ggtggccgcg tgggtgaacg
      661 ggagggacag cggggaagga cggcataccg ggccgtccct tgctcgcgcg ctccttcggc
      721 cttcagttca gcctctgcgg gaccttcgtc atcgtcggcc tgggcaagaa cgctgaagga
      781 ccagtgccca tgtcgccggc cccaggccat tgtcatcctt aaaagatcag cgtcggctat
      841 ctgatgtctg ccttatccag gcggcggtgc agcatggacg cgagggtgag catgtccagg
      901 gcatcgctgc gcgaggtggc ccgggccacc ctgggagcgt gggctgccgg gttgcggaag
      961 gtgcctggcc acctgacgac gcgacgatcc gctggttgtg ctcggtcgga tggtgggtca
     1021 gtccacgggt gtaagtccgt tggccgtgac acggtaggcg ccggaatcga attcgctgcc
     1081 agttgccagg gcggcgattt cctgaccgac tcgctcgggg gtcagtgtgg gatcgaggcg
     1141 ctgtaggaag cggtcgagcg aaactccttc gcgctgggca tgtgcggtag ccgcggcgtg
     1201 tcccagagct gtgcccgcgt tgagccccgg cactgctgaa acgaatctga tgccgagctt
     1261 cgcacggtcg gattcctccg ctgcgaatcc cgtcatgaac aggatggtcg cctttgctcc
     1321 ggagtatcca ccgccgatcg aggagccctg aagcgcggca ccgctggaga cagcaaccac
     1381 cacgctcccc ggatccagag gagccagcag cgcctcacgt gtccagttga acacgtggcg
     1441 gacgtcgacc tcccagttgc tgctgaacgt ctcccagctg tacttgtgca gcggccgaag
     1501 cagcgggtgc gcaccggcgt tc
//
LOCUS       DASRPQ010000432         1545 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1938090, whole genome shotgun sequence.
ACCESSION   DASRPQ010000432 DASRPQ010000000
VERSION     DASRPQ010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1938090"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(65..337)
                     /locus_tag="VFD73_05125"
     CDS             complement(65..337)
                     /locus_tag="VFD73_05125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73399.1"
                     /translation="MPEAVGHTELSTTALARLLAGGMRDELLAIMREMSERNTLAERL
                     AYSPDEAAELLGISTELIHDLLRTGQPGRLRLIPPRLLVPRAVPCG"
     gene            complement(725..>1545)
                     /locus_tag="VFD73_05130"
     CDS             complement(725..>1545)
                     /locus_tag="VFD73_05130"
                     /inference="COORDINATES: protein motif:HMM:NF014124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RyR domain-containing protein"
                     /protein_id="HZI73400.1"
                     /translation="AIRGESADTLPGFLNHFPVVREKCRVSQDGEPPPRPSQEAGPTL
                     TFVCLSDNDDALTAGLGAAHSLTGRADRVVICMSEPSPFGTILTGRHALLDDRQGRLA
                     VFEVTEEGCVPGRIREDLTDQLARAIHQAYVDNRMRRGDSPRLNKSMGPWEELPPDRQ
                     RANLAQAKDIGVKLEAIDSIVVPRSAGAPEFAFTAEEIEQLAQMEHRRWVQDRQAEGY
                     VHGLDRESGQHPDLVDWEHLSESAREKDRDAIRELPQILRQAGFQILRLPPRSP"
BASE COUNT          239 a          517 c          510 g          279 t
ORIGIN      
        1 cgaccggttg atccgcgacg ccatgacacc cctcccgcac gtggcctacg aacggaggat
       61 gcgctcaccc gcacggaacc gcacgcggaa ccagcaacct cggcggtatc aggcggagcc
      121 tgcctggttg gccggtgcgc aacaggtcat ggatgagctc tgtggagatg cccagcagtt
      181 cggcggcctc gtcggggctg taggcgagcc gctcggcgag ggtgttgcgt tccgacatct
      241 cgcgcatgat ggcgagcagt tcgtcgcgca tgccaccggc gagcaaccgc gcgagcgcgg
      301 tggtactgag ctcggtgtgg ccgacagcct caggcacggc cacgtgactc ccctgcggct
      361 ccatcaggtt ttgtagtcct tggcctcgtc cgggcagtcg cgggttgggt tcccggtggt
      421 gatctgctgc ccggccagcc gtggatcggc ttggctgtcg ccgctggatg ttggcagtga
      481 gttatgggcg tcggcttcag ttctgacggg aaatacctcg tcacggcgaa cgcaagaacc
      541 ggtggcccgg cagacccctg ccagataacc gaatgggctt atcgccaagc ctctggtccg
      601 agatcgcggg cgcctcggcc gggcatgccc tcaccagcaa cgagtggcag gaatacgtcg
      661 ggcccggcag gcgagcgatg ccgaaccagc tcgcgtgcgg gtcctgagcc cctcctccgt
      721 gcgcttacgg cgatcgcggt ggcaggcgga gaatctggaa tcccgcctgc cgcagtatct
      781 gcgggagctc acggatcgcg tcacgatcct tctcccgggc gctctcgctg agatgttccc
      841 aatccaccaa gtcggggtgc tggccgctct ctcggtcaag cccgtgcaca tagccttccg
      901 cctggcggtc ctggacccag cgccgatgct ccatctgagc cagctgctcg atctcctccg
      961 cggtgaacgc gaactccggg gcgcccgcgg accgcgggac gacgatgctg tcgatggcct
     1021 cgagcttgac gccgatgtct ttggcctgcg caaggttggc ccgctggcga tcgggcggca
     1081 gttcctccca gggccccatc gacttgttga ggcgcggtga gtcgccccgg cgcatccggt
     1141 tatccacata ggcctggtgg atggcacgag caagctggtc agtcaggtct tccctgatcc
     1201 tccccggcac gcatccctcc tcagtgactt cgaacaccgc aaggcgtccc tgtctatcgt
     1261 ctagcaatgc atgccgtccg gtcagtatcg tcccgaacgg tgagggctca ctcatgcata
     1321 tcactacacg gtcggcacgg cccgtcaacg agtgggccgc tcccagtccg gcggtcagcg
     1381 cgtcatcgtt gtccgagagg cagacgaagg tcaaggttgg cccggcctct tgtgatggcc
     1441 gaggcggcgg ctcgccgtcc tggctgaccc ggcacttctc gcgcaccacc ggaaaatggt
     1501 taaggaagcc cgggagggtg tccgcgctct caccgcggat ggcca
//
LOCUS       DASRPQ010000433         1463 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_990183, whole genome shotgun sequence.
ACCESSION   DASRPQ010000433 DASRPQ010000000
VERSION     DASRPQ010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1463
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_990183"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..265)
                     /locus_tag="VFD73_05135"
     CDS             complement(<1..265)
                     /locus_tag="VFD73_05135"
                     /inference="COORDINATES: protein motif:HMM:NF020387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RES domain-containing protein"
                     /protein_id="HZI73401.1"
                     /translation="MPTVYRLAKRRYPVYDGTGAALEGARWNSPGRTLIYASEHYATT
                     LLEKLVHAGRTTLPGAHHAAAIVIPDDLSIVVLDPATLPGWELE"
     gene            complement(273..716)
                     /locus_tag="VFD73_05140"
     CDS             complement(273..716)
                     /locus_tag="VFD73_05140"
                     /inference="COORDINATES: protein motif:HMM:TIGR02293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin Xre/MbcA/ParS toxin-binding
                     domain-containing protein"
                     /protein_id="HZI73402.1"
                     /translation="MASYPDVLKVAQALGGPKILRKNVFTVADLERVVGNGLPFAALK
                     HVVRHFPERQKTRVQQIVVPRSTLQRREEEGKLRPAESERLERIARLATLAEQVWESP
                     DEAQRFLTTPHPLLGNEAPIDLAASDLGTRRVETLLWKLEHSLPV"
     gene            complement(854..1084)
                     /locus_tag="VFD73_05145"
     CDS             complement(854..1084)
                     /locus_tag="VFD73_05145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF378 domain-containing protein"
                     /protein_id="HZI73403.1"
                     /translation="MKSLDLAAVTLLVIGGLNWGLVGAAKFDLVAALFGTLSPLSRVV
                     YILVGLAAVYRLLQWKSIEHRRAFAPAESAGR"
     gene            1199..>1463
                     /locus_tag="VFD73_05150"
     CDS             1199..>1463
                     /locus_tag="VFD73_05150"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HZI73404.1"
                     /translation="MLTDPTQPRYPVRVAAERSGVNPHVLRAWERRYRVVTPHRSQAG
                     QRLYSDLDVQRLGLLRQLTGQGHSISRLATLSLEELERIAAEDR"
BASE COUNT          285 a          475 c          440 g          263 t
ORIGIN      
        1 cctccagctc ccagccgggc agggtggctg gatcgagcac cactatggag agatcatccg
       61 gaatgacgat cgccgccgcg tggtgagccc cggggagtgt cgtgcggccg gcatggacca
      121 gcttctccaa cagggtggtc gcgtagtgct cggaggcata gatcaatgtc cgcccaggcg
      181 aattccaacg ggcaccctcc agcgcggcac cggttccgtc gtagacgggg taccttcgtt
      241 ttgccaggcg ataaacggtc ggcactgcga gatcagaccg ggaggctgtg ctccagtttc
      301 caaagcagcg tctctactcg acgagtgccc aggtcactcg ccgccagatc gatcggcgcc
      361 tcattcccca gcaaggggtg gggagtcgtg aggaaccgct gcgcttcatc cggcgactcc
      421 cacacctgtt cggccagggt ggccagacgg gcaatcctct cgagccgctc gctctctgcc
      481 ggccggagct tcccctcctc ctcccttcgc tgaagcgtcg accgggggac gacgatttgt
      541 tggacgcgag ttttctgacg ctcgggaaaa tgtctcacga cgtgcttcag agcggcaaag
      601 ggcaacccgt tgccgacgac ccgctcgaga tcggccacgg taaagacgtt cttgcgcaga
      661 atcttggggc caccaagcgc ctgcgccacc ttgagtacgt cgggataact ggccatagtg
      721 cctcctgccc agatggtaag aagataatcc caattgggca gattggctag ggctagggct
      781 acggttctct ggccagcaac ggcggggcta accaaacggc ccgggaaccg ggccgttttg
      841 ctgcatcaag agcctaccgt ccagcgctct ccgccggcgc gaaggcacgg cggtgctcga
      901 tggatttcca ctggagcagg cggtacaccg cagccagccc gaccaggatg tacacgaccc
      961 ggctaagggg gctcagcgtt ccgaagagcg ctgcgaccaa gtcgaatttc gctgccccaa
     1021 ccagccccca gttcaatcca ccgatgacca gcagggtcac ggcggcaaga tcgagcgatt
     1081 tcatgaaagg acctccaaag ggtttattgt ctaactaacg tccattaaat tgcacgcctg
     1141 cccccggggt gtcaagcttt tcctttgaca aaccttggac attagagtaa gttcacctat
     1201 gctcacggac ccgacccagc cccgataccc cgttcgagtc gcggcagaga gaagtggcgt
     1261 caatcctcac gtcctccgag cctgggagcg gcgctaccgg gtggtcaccc cacaccggag
     1321 tcaggccggc caacggctct actccgatct ggacgttcag cgtttaggtc tgcttcggca
     1381 gctcaccggc cagggccaca gcatcagccg tctcgccacc ctctctctgg aggagctgga
     1441 gcgcatcgcg gccgaagatc gcg
//
LOCUS       DASRPQ010000434         2376 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1617040, whole genome shotgun sequence.
ACCESSION   DASRPQ010000434 DASRPQ010000000
VERSION     DASRPQ010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2376
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1617040"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..342)
                     /locus_tag="VFD73_05155"
     CDS             complement(<1..342)
                     /locus_tag="VFD73_05155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73405.1"
                     /translation="MTSEPVRDPLADHLLTPRNCALIIIDYQPTQIRSIKSMDQDLLV
                     DRVVHLARYGMLYRLPVVLSTVNVSTGRNQPTIGPLQDVLPGITALDRTTINAWEDAE
                     FKQAVRAAGRRK"
     gene            complement(446..781)
                     /locus_tag="VFD73_05160"
     CDS             complement(446..781)
                     /locus_tag="VFD73_05160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73406.1"
                     /translation="MPDWTVCLKATSEHADAGNVGYRPAGRANGQQDGEAAVSLNQLL
                     VDQPRPEIARSTLSLGAWISAAPHQARRTQAGITVRSAGNKARYRAITDGYTWPQAAQ
                     GRGGYSAGL"
     gene            complement(1074..1418)
                     /locus_tag="VFD73_05165"
     CDS             complement(1074..1418)
                     /locus_tag="VFD73_05165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73407.1"
                     /translation="MLRLTVARRLASLALHPVCSVLHAGTQDKQRAIAAALAEEVFIP
                     PSPSCCGFAGDRDFLHPELTQSATAPMADQLAGRECSGYLSSNRTCEIGMQRVTGRPS
                     PSFMFLLEELTR"
BASE COUNT          401 a          710 c          832 g          433 t
ORIGIN      
        1 cttgcggcgg ccggccgccc ggaccgcctg cttgaactcg gcgtcttccc aggcgttgat
       61 ggtggtccgg tccaaagcgg taattcccgg caggacgtcc tgaagcggcc cgatggtggg
      121 ctggttccgt ccggtactga cattgaccgt cgacagcacg accggcagcc ggtacaacat
      181 gccgtaccgg gccaggtgca cgactcggtc gaccagcagg tcctgatcca tggatttgat
      241 ggacctgatc tgggtgggct ggtagtcgat gatgatgagc gcgcagtttc gcggggtgag
      301 cagatggtct gcgagcgggt cgcggacggg ctcacttgtc atgagatgcc tcctggccgg
      361 tgactgtacg ggcagcggac cgcctttctt catccccagt ccatctggcc tgtgcccgtt
      421 ggccaaagcg gcggtggctg ttgcgtcaga ggcccgcgct ataaccaccg cgtccttggg
      481 ctgcctgcgg ccaggtatag ccgtcggtga tggctcggta acgcgccttg ttcccggcag
      541 accgaacggt gatgcctgcc tgagtgcggc gggcctggtg aggagccgcg ctgatccacg
      601 cgcctagcga aagcgtggac cgggcgatct ctggtcgggg ctggtcaacc agaagctgat
      661 tcaagctcac ggcggcctca ccatcctgct ggccgttggc gcgtccggcc ggtctgtaac
      721 cgacattacc cgcgtcggca tgttcgctgg tggccttcag gcagaccgtc cagtcgggca
      781 tggcatgccc aaccggtcac gcggggctgc gcgattctca tagtgcggac gacccgaccg
      841 ggtgcgtgca ggcggccggg agagcaacag gcccggaccg ttcgggatca ttctgttctt
      901 cctcattccg aacagtccgt agtacttggc ccggcaccgg ctctccagct tcgcggccat
      961 catcggtcga gaagggacac aacttcatga gatgagagtg ccttcgtcgg tggccggagt
     1021 tcgctgtgga ggaatgtcgc aaccgggcca ggcggagggc cggctggcgt gcgttagcgg
     1081 gtgagttcct cgagcaggaa catgaaggag ggggacggcc ggccggtgac gcgctgcatg
     1141 ccgatctcgc aggtgcggtt actggacagg tagccggagc actcgcgccc ggccagctga
     1201 tcggccattg gtgcggtcgc cgactgggtg agttctgggt gcaggaagtc gcggtcgccg
     1261 gcgaagccgc agcaactcgg ggatggcggg atgaagacct cctcggcgag ggcggcggcg
     1321 atcgcccgct gcttgtcctg ggtgcctgcg tggagcacgg agcagactgg gtgcagcgcg
     1381 agcgacgcca acctgcgcgc cacggtcagc cgcagcaaca gccggtcatg ggcgtagtcg
     1441 acgctgtcca gcagcgtgag cgcgtcgaac cgccgctggt tctgcggatt gagttacggc
     1501 cggatgccat gcaggccgta ggcgcatgaa ctggcattag tcaccagcac tagccagccg
     1561 ccgccgtcca ccggtacgcg cgctctgcca ccggttggcc atcagggcgt tgccgtcaca
     1621 ccaggcgcga cacggatcga cgtgctgggt cgtagctgcc aataccgcat aatcgccgac
     1681 gcgcggccgc aggctggtcc tctcccggct gcatgtccaa cccgaccggc tcggcgggca
     1741 gggtatgccg ccagcgttct ccacgcaacg gagacggccg gtggtcgaag ccgggtacat
     1801 caggctgaca ccgtcgcatt gagtcttatt accgcaggcc agacggacgt cggtgtctta
     1861 gatacgtcgc gccatgcctg ccgtcagctg gcgtcggaaa gacaccatat cacttggcta
     1921 gtcacttgat cttgaacgta gtagtcgaaa ataaaacgga aatctcgttg agctggagcc
     1981 ccgttacgga atcgaaacgt agaccttctc cttaccatgc aagccgacac cgtctggcag
     2041 cgtcgcatgc agtcgaatca ctgcagttca gagggacacc ggtgtctggg taggtcgtgc
     2101 tgggtccgtt gttatctgga gccgtagtaa taggacaacg cgctagaggc gcccgttttg
     2161 cgggatgcgg ttgaggcggg gacgtcctcc cggtgcgata gtgcgggctt ggtgtcccag
     2221 gcgcaaccag agaggacgtc ctgtgagcaa gggtagcggc atgacccggg gggatagtag
     2281 gcgtaatgcg cgccgtgagc ggctgcgcga ggtgctcccg cgtgatggcg cggtgatcgg
     2341 gatcgacctg gccgaggata agcaggcgat cgcagt
//
LOCUS       DASRPQ010000435         1175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2870875, whole genome shotgun sequence.
ACCESSION   DASRPQ010000435 DASRPQ010000000
VERSION     DASRPQ010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2870875"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..264)
                     /locus_tag="VFD73_05170"
     CDS             complement(<1..264)
                     /locus_tag="VFD73_05170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73408.1"
                     /translation="MAVRLLPFPADSAGVISGWARTREEVIMWCGHQSAPVPAGQVSA
                     WAREDGVQPFGLYRDGQLVAYGELWTDDSEAEAELARLIVDPGE"
     gene            520..>1175
                     /locus_tag="VFD73_05175"
     CDS             520..>1175
                     /locus_tag="VFD73_05175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73409.1"
                     /translation="MLRRALTLLAAVTALLVPATAAFASIGQNPRWESSARQATWHHG
                     GFLFQNDMWNCPQAACGKQTIWANSASNWGAVSDMATGNTAVLTYPNIAKLFNDEPVS
                     HFGLIRNGFAESMPRQIKGLSAEAADDVWLNNYSIEMMIWVDSAGRSLAGSTRLGSAT
                     ISGQHFTVWKYGGTEFIFKLNHNETSGQTAILASINWLISHHLVPAGVTLTQVDFGWE
                     V"
BASE COUNT          214 a          404 c          359 g          198 t
ORIGIN      
        1 ctcaccggga tcgacgatga gccgcgcgag ttctgcttct gcttcgctgt catcggtcca
       61 cagctcgccg taggccacga gttgcccgtc acggtacaga ccgaatggct gcaccccgtc
      121 ctcgcgggcc caggcactga cctgcccggc cggcactggt gcggactggt ggccgcacca
      181 catgatcact tcctcgcgcg ttctggccca gccggagatg accccggccg agtcagcagg
      241 gaaaggaagc aaacgcacgg ccatggcagc ggactcctct ccagggaccg cgaaccatca
      301 tcctcttgtg atcgcgcgcg gtgcaccccc gcacgtccgc catatccggg gccattgacg
      361 acggcggtca cccgcccgcc acgggttatt ggctccgcct ttttgcggat ttctcccgaa
      421 cgcaccctgt tcgtggtggt cgctgctgta gcgtgcccgg cggtggcgta tctctgagcg
      481 ccgccgatgc caggtatccg accggaaagg caagccccga tgctgagacg cgcccttacc
      541 ctgctggcgg ccgtgacggc cttgctggtg ccggccacgg ccgcattcgc gtcaatcggg
      601 cagaatccga gatgggaatc cagtgcccgg caggccacct ggcaccacgg cggctttctg
      661 ttccagaacg acatgtggaa ttgcccgcag gccgcctgcg gcaagcagac catctgggcc
      721 aactcggcca gtaactgggg ggcggtctcc gacatggcga ccgggaacac cgccgtgctg
      781 acctacccaa acatcgcgaa actgttcaat gacgagccgg tgtcgcactt cgggctgatc
      841 cgcaacggat tcgccgagtc aatgccacgg cagatcaagg gcctgagcgc cgaggccgcc
      901 gacgacgtgt ggctcaacaa ctacagcatc gaaatgatga tctgggttga cagcgcaggc
      961 cggtcactag ccggatccac ccggctcggc agcgccacga tctccggcca gcacttcacc
     1021 gtgtggaagt acggcggcac cgagttcatt ttcaagctga accacaacga gacatccggc
     1081 cagacagcca tcctggcctc aatcaactgg ctgatcagcc accacctggt tccggccggc
     1141 gtgacgctga cccaggtgga tttcggctgg gaggt
//
LOCUS       DASRPQ010000436         1482 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3496838, whole genome shotgun sequence.
ACCESSION   DASRPQ010000436 DASRPQ010000000
VERSION     DASRPQ010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1482
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3496838"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(244..>1482)
                     /locus_tag="VFD73_05180"
     CDS             complement(244..>1482)
                     /locus_tag="VFD73_05180"
                     /EC_number="3.4.17.19"
                     /inference="COORDINATES: protein motif:HMM:NF014165.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase M32"
                     /protein_id="HZI73410.1"
                     /translation="ELRREYDRYVRLPRTLVEGVARTTALAQTAWATARARSDFEIFR
                     PWLEKIVELKRAEAECVGYAREPYDALLEDHEPGMTSEIVARLFYALRRELVPLAARI
                     RESRMRAKPLRSSFPVEQQRAFGESVAVAVGFDDTRGRFDLGVHPCCTGIGPGDCRLV
                     LRFDAYDFPGGLLTILHEVGHGLYEQGLDPEYYGTPMGEPASVGMDEAQARLWENRVG
                     RSRGFWQHFYRRAQRLFPAALTGSLEQFLLLVNQVRPSLIRVNADEVTYNLHVLVRFE
                     LERALVSGDLKAADIPEAWNAGYRRYLGIEPGNDREGCLQDGHWADGLLGYFPTYTLG
                     DVFAAQLFARAEAELGSLEQQFAAGEFAELVGWLSRSVYKEGSRYPSARLIEVATGGA
                     PSHRPLVAALQEKYSRLYRL"
BASE COUNT          267 a          512 c          443 g          260 t
ORIGIN      
        1 cgttaccttg cgagatcgca cgctgatttg cggaaaattg agaaggaaag tagcttcgcc
       61 cctgggtggt gagcgcgagc gtgacgaccc ggattgttcg gaacccaaat tccggcgatc
      121 aatgagcggg aagttgcgta ggccctcggc cctaaactcc cttgggtgcg ctcccaccta
      181 cttccgtcca tctccagccc cgtccagccg ggcaaattcc ccttcctgca tgcgtccggc
      241 gagttacagt cgatagagcc tggagtactt ctcctggagc gccgccacca gagggcggtg
      301 actcggcgcg ccccccgtcg cgacctcgat cagccgggcg gagggatagc ggcttccttc
      361 cttatagacg cttctgctga gccagcccac cagctcggcg aactccccgg ccgcaaactg
      421 ctgctccaga cttcccagct cggcctcggc ccgggcaaag agttgagccg cgaacacgtc
      481 gcccagcgtg taggtcggga agtacccgag aagaccgtcc gcccaatgtc cgtcctgcaa
      541 gcatccctcg cggtcgttac ctggctcgat cccgagatac cggcggtaac cggcgttcca
      601 ggcctcgggg atgtcggctg ccttcaggtc tccagacacc agcgcccgct ccagctcgaa
      661 gcgcaccaga acatgcaggt tgtaggtcac ctcgtcggca ttgacccgaa tcagcgaggg
      721 ccgcacctgg ttgaccagca gcagaaactg ttcgaggctt ccggttaacg cagctggaaa
      781 gaggcgttgg gctcgacgat aaaagtgctg ccagaatccc cggcttcgtc cgacccggtt
      841 ttcccagagc ctggcctggg cttcatccat tcccaccgac gccggctcgc ccatgggggt
      901 cccgtagtac tccgggtcca ggccctgctc gtacaacccg tgacccactt cgtgcagtat
      961 ggtgagcagt cctccgggaa agtcgtaggc atcgaaccgc agcacgagac ggcagtctcc
     1021 cggccctatt ccggtgcagc agggatggac gccgagatcg aatcggcctc gggtatcgtc
     1081 gaatcccacc gccaccgcaa ccgactcacc aaaggcgcgc tgctgctcga cgggaaacga
     1141 gctccgaagc ggttttgccc gcatccggga ttcccgaatc cgcgcggcga gagggaccag
     1201 ctcccgccgt aaggcgtaga acagccgggc gacgatctcg ctggtcattc ccggttcgtg
     1261 gtcttccagc agggcgtcgt acggctctcg ggcatagccg acgcactccg cttcggctcg
     1321 cttcagctcc acgatcttct ccagccacgg tcggaaaatc tcgaagtcgg agcgggcccg
     1381 cgcagtggcc cacgcggtct gcgccagcgc ggtggtccgc gcaacgcctt cgaccagggt
     1441 gcgcgggagc cgcacatacc gatcgtactc ccgcctgagc tc
//
LOCUS       DASRPQ010000437         1072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1938465, whole genome shotgun sequence.
ACCESSION   DASRPQ010000437 DASRPQ010000000
VERSION     DASRPQ010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1938465"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(123..833)
                     /locus_tag="VFD73_05185"
     CDS             complement(123..833)
                     /locus_tag="VFD73_05185"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HZI73411.1"
                     /translation="MNHFLPTATTSDEKERDAKCAILPVGSFEQHGEYLPLITDTVIA
                     TVLSRELAGAYPLLQLPPVTVSCSHEHSAWRGTVSISSTTLQAIVDDIYRSITASGLT
                     SLVVVNCHGGNYSLANVVQEGNAHRKKMALFPTGTDWAEARQAAGLATSNHEDMHAGE
                     LETSILLHAHPELVRDGYQAADWTADDRRHLLTTGMGEYTHNGVIGRPSLASAEKGKA
                     VLSSLVDSFASVLEILQR"
     gene            complement(833..>1072)
                     /locus_tag="VFD73_05190"
     CDS             complement(833..>1072)
                     /locus_tag="VFD73_05190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73412.1"
                     /translation="LCVSRLALAYAAAGDVERACAAADEVVTLAQGLGSRRVVSQLCL
                     LYRGLERWRRDPAVARVRGRLKMLADSFKPEREAS"
BASE COUNT          179 a          341 c          353 g          199 t
ORIGIN      
        1 aaggctgacc tgcgcattcg ttaaccgagc ttgctagtgc tatgccaagc ttggtacggt
       61 aacaggaccc cggcagagcc gtcagtgtcg tcaggcactc gttccccgga tctgccgggg
      121 gttcaccgtt gcaggatctc cagcacggac gcgaagctgt cgaccagcga ggacagcacg
      181 gcctttccct tctctgcgga agccagagac ggccggccta tcacaccgtt atgggtgtat
      241 tcacccatcc ccgtggtgag gagatggcgc ctgtcgtctg ctgtccagtc cgcggcctgg
      301 tagccgtcgc ggactagttc ggggtgcgcg tggagcagga tggaagtctc gagctcgccg
      361 gcgtgcatgt cctcatgatt tgacgtggcg agcccggctg cctgccgggc ttccgcccag
      421 tccgtaccgg tcgggaacag cgccatcttc ttgcggtgcg cgtttccctc ctggacgacg
      481 ttggccaggg agtagttccc gccgtggcag ttcacgacga ccagcgaggt caggccggac
      541 gccgtgatgg agcggtagat gtcatcgacg atggcctgaa gggtggttga cgagatgctc
      601 accgtgccgc gccaggcgct gtgctcatgg gagcaggaga cggtgactgg cggaagctga
      661 aggagtggat aggcgcccgc cagctcccgc gataggacgg tcgcgatcac cgtgtcggtg
      721 atcagcggca ggtattcgcc gtgctgctcg aagcttccga ctggaaggat cgcgcatttt
      781 gcgtcgcgtt ccttctcgtc cgaggttgtc gccgtgggca ggaagtgatt catcagcttg
      841 cctctcgttc tggcttaaac gaatcggcaa gcatcttcag cctccctcgc acgcgggcga
      901 cggcaggatc ccgccgccac ctctccagcc cacggtagag caggcaaagc tggctgacta
      961 cccggcgcga gccaagtccc tgggccagcg tcacgacctc atcagccgcc gcgcaggccc
     1021 gctccacatc gccagccgcg gcgtaggcca gcgccaggcg tgacacgcac ag
//
LOCUS       DASRPQ010000438         1253 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_50379, whole genome shotgun sequence.
ACCESSION   DASRPQ010000438 DASRPQ010000000
VERSION     DASRPQ010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50379"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            108..356
                     /locus_tag="VFD73_05195"
     CDS             108..356
                     /locus_tag="VFD73_05195"
                     /inference="COORDINATES: protein motif:HMM:NF013236.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliM/FliN family flagellar motor switch protein"
                     /protein_id="HZI73413.1"
                     /translation="MNPQEEIAALGDVPVEIEVELERRWMGTEEVLQLEEGSVISTER
                     SAGENIDIYIGSVLCGSGEIVVIENTLGVRITDFRDDF"
     gene            369..656
                     /locus_tag="VFD73_05200"
     CDS             369..656
                     /locus_tag="VFD73_05200"
                     /inference="COORDINATES: protein motif:HMM:NF016250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliO"
                     /protein_id="HZI73414.1"
                     /translation="MEPVWQIAAVSAVLGLLGATLWWLRRRGMAGLVPAGWTGRRRLE
                     PLERLPLGPQQTLHLVRLGETALLVASSPAGCALVHSLPFREIESGREAVR"
     gene            653..>1253
                     /locus_tag="VFD73_05205"
     CDS             653..>1253
                     /locus_tag="VFD73_05205"
                     /inference="COORDINATES: protein motif:HMM:NF013011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HZI73415.1"
                     /translation="MRGIRWTILLAAGLPAMAAGPEPLSMLGITTGKGAGLSVPMQIV
                     ILMTLMTMLPAAVVCITPFLRITVVLHFLRQALGTQSAPSNQVLLGLSLFLTIVIMQP
                     VAADMYHQGWEPMEAGQLTSQQAFDRAATPLRAFLVRFARERDIKLFVEVSKTPPPRT
                     PADVELRVLIPAYILSELKAGFQIGAVLFLPFLVIDLVVA"
BASE COUNT          221 a          356 c          440 g          236 t
ORIGIN      
        1 agcgggggta cgaagcgaac tcgagggtgg tatccaccgc ggacactttg agccaggaca
       61 ctatcaactt aatccactag gctgccgatt aatcaaccag gcagccgatg aatcctcagg
      121 aagagatcgc agctttgggc gacgtcccgg tcgagatcga ggtggaactc gagcggcgct
      181 ggatgggcac cgaagaagtg cttcagctcg aagaaggaag tgtcatctcg accgagcgct
      241 cggccggcga aaacatcgat atctacatcg ggagcgtgct gtgcggctcc ggagagatcg
      301 tggttatcga gaacacgctg ggcgtacgga tcaccgactt ccgcgacgat ttctgaaagg
      361 gcgggtggat ggaaccggtt tggcaaattg cagcagtgtc ggcggtactg ggcctgctag
      421 gggcgaccct gtggtggctg cggaggcgcg gcatggcggg cctggttccc gcaggctgga
      481 cgggacggcg ccggctggag ccgctggagc ggttgcctct cggacctcag cagacgcttc
      541 acctggtccg tttgggcgaa acggcgctgc tggtggcgtc gtcgcccgcg ggctgcgccc
      601 tggtgcacag cctgccgttc cgtgaaatcg aatcgggacg ggaggcggtc cggtgagggg
      661 catccgatgg acgattctgc tggcggcggg tttgccggca atggctgccg gcccggagcc
      721 gctctcgatg ctggggatca ccacgggaaa gggcgcgggg ctgagcgtgc ccatgcagat
      781 cgtcatcctg atgacgttga tgactatgct gccggcggcg gtcgtctgca taacgccgtt
      841 tctgcggatc acagtggtgc tccactttct gaggcaggcg ctgggaacac aatcggcgcc
      901 gtcgaaccag gtgctgctgg ggctgtcgct cttcctgacg atcgtgatca tgcagccggt
      961 cgcggcggac atgtaccacc aggggtggga accgatggag gcaggacagt tgacgtcgca
     1021 acaggcattc gatcgtgcag ccacaccact gcgcgccttc ctggtgcgct tcgcccgcga
     1081 acgggacatc aagttgttcg tggaagtctc caagacaccg cctccgagaa cgccggcgga
     1141 cgtcgagctg cgggtgctga tcccggccta cattctttcg gagctgaagg cgggattcca
     1201 gatcggcgcc gtgctgttcc tgccgtttct ggtcatcgac ctcgtggtcg cat
//
LOCUS       DASRPQ010000439         1406 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3193762, whole genome shotgun sequence.
ACCESSION   DASRPQ010000439 DASRPQ010000000
VERSION     DASRPQ010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3193762"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VFD73_05210"
     CDS             <1..201
                     /locus_tag="VFD73_05210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73416.1"
                     /translation="RLEGALQVQPGQTVSAVVAHNCAVACVADTGASTADRKGARLAV
                     YGTGEGSGVVPLPKRTRRPSGV"
     gene            327..560
                     /locus_tag="VFD73_05215"
     CDS             327..560
                     /locus_tag="VFD73_05215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73417.1"
                     /translation="MLPDYGYPRRRETPRSSEADHDLETDATTLKAVNDQLKRRMHQP
                     IPEQGRWLAAWCPHMVYYAVPGNYEAVAASVTR"
     gene            1183..>1406
                     /locus_tag="VFD73_05220"
     CDS             1183..>1406
                     /locus_tag="VFD73_05220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73418.1"
                     /translation="MTPDHPGPVSPGDIYEDCAFHPVLCTDTCDDEVRGISLIDATSP
                     RSCSLIHCGVIKLTIAEVVEARADFPAYQAR"
BASE COUNT          247 a          455 c          469 g          235 t
ORIGIN      
        1 cggctggaag gtgccctgca ggtgcagccc ggccagaccg tcagtgccgt tgtagcccac
       61 aattgtgccg tcgcctgtgt tgccgacacc ggagctagca ccgctgatcg taagggtgcc
      121 cgtcttgccg tctacggtac cggtgaaggt tccggtgtcg tgccattacc caagaggacg
      181 agacggccga gcggagtgtg acgttcggca gcgggcagcg ggcagcggcc gctaccgccc
      241 tatcgctgcg gcgactgccc taagccgaac ttcccccacc ttggccgggc gtagggcgtt
      301 tacctgcgga aatgtagggt gatctgatgc tgcctgacta cgggtacccg aggcggcgag
      361 agacgccgag aagctcggaa gcggatcacg atctcgaaac ggatgcgacg acgctgaaag
      421 cggtcaacga ccagctcaag cggcgcatgc accagcccat accggagcag ggccgctggc
      481 tggccgcgtg gtgccctcac atggtctact atgccgtgcc cggcaactac gaggcggtgg
      541 cggcttctgt gaccaggtga cccgtactgg ctgaagaagc tgcggcgccg cagtcagaaa
      601 ccagggtcga ccggacgcgg atggtccgga tccggaaacg atggctgccg ccggtgcggg
      661 tgatgcatcc ttcccggagg cgcgcttcgc cgccacacac ccaaggtagt aggagcccag
      721 tcggtaatcc cgcaagctgg gatctgcgcg gcgggcccgc ccgcaagggc ggcccctact
      781 gggactatca gaaccctccg aatacccagc ccgcatcgtg gcggggacgg ggacccgtac
      841 gcttgctggc gatcaggcag cctggcctgc ccgccctgcc gattattaaa tggcgtgctg
      901 acgtgcccgt atgccggcat ggccgcgcgg aacagccagt tctggtcgtc cacgctgagc
      961 ggcggccacc gtcggcaaga gtttccagcc ggagtgccct ggccgcatgc gcatgagtgc
     1021 cttcggattg ccatgcggcg gcggggattg cgcgctcagt agcctgggat gatcaatgga
     1081 tctacacctg acctggtccg tcgctagtct cgacgatacg gcaggcatct ggctggccgc
     1141 tgcggcctgc agactgcgca cgccagcagg cagactggca gcgtgacacc agaccatccg
     1201 gggccggtca gccccggtga catctatgag gactgcgcgt tccatccggt cctgtgcacg
     1261 gatacctgcg acgatgaggt caggggtatc tccctgatag atgccacctc accccgctcg
     1321 tgctccctca tccattgcgg agtcatcaag ctgaccatcg cggaggtagt ggaagcacgg
     1381 gctgactttc ccgcctacca ggcgcg
//
LOCUS       DASRPQ010000440         1782 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1303887, whole genome shotgun sequence.
ACCESSION   DASRPQ010000440 DASRPQ010000000
VERSION     DASRPQ010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1303887"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1782
                     /locus_tag="VFD73_05225"
     CDS             <1..>1782
                     /locus_tag="VFD73_05225"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="adenosylcobalamin-dependent
                     ribonucleoside-diphosphate reductase"
                     /protein_id="HZI73419.1"
                     /translation="WFVPNSPTLMNAGRPLGQLSACFVLPVDDALSNGKSGIYDTLRS
                     MALVHQSGGGTGFSFSRLRPKNDIVRSTMGVASGPVSFMTLFDASTDVVKQGGTRRGA
                     NMGILRVDHPDILEFITCKDDTSKVTNFNISVAVTDAFMEAVETDSRYDLIHPKTGEV
                     TGQLRAREVWALIIHGAWKTGEPGVFFIDKANYYNPVPHLGQYEATNPCGEQPLLPYD
                     VCNLGSINLGAFVTGAPQAGPLSTKDQLAAALDRVDWAQLRRVIHLSTHFLENVIDAN
                     QYPLPEITELAQRIRRIGLGVMGLADVFVKLGIPYDSEEGVEVGRRLQRFVDEEAKVE
                     SERLARERGVFPEWERSIWGPDGTCARNAAGERIRPMRRLRNCNVTTVAPTGTISIIA
                     GCSSGIEPLFAVAFMRNQAGVLMPDVNEDFVAIAKLEGWYSDDLMRRIAEAGHIEFPE
                     VPARWQRVFVTANAIKPEWHIRMQAAFQEFNDSAISKTCNFAHDASEEYVEEIYRLAY
                     RLNCKGVTVYRDGSREMQVLSTGSTAKKVVAGSAPAAPAAVSADLHGELAELRADNER
                     LQRLVHELESENLQRRQKRSRPEVLRG"
BASE COUNT          335 a          565 c          568 g          314 t
ORIGIN      
        1 gatggtttgt ccccaactct cccaccctca tgaatgccgg ccggcccctg ggacagctct
       61 ccgcctgttt cgtgcttccg gtagacgatg ctctctccaa cggaaaaagc gggatctacg
      121 ataccctccg ctccatggcc ctggtgcatc agtccggcgg cgggaccggg ttcagctttt
      181 cccgtctacg ccccaagaac gacatcgttc gttccactat gggcgttgcc tccgggccgg
      241 tgtcgttcat gaccctcttc gatgcctcca ctgacgtggt gaaacaaggc ggaacccgcc
      301 gcggggccaa tatggggatc ctgcgggtgg atcacccgga cattctggag ttcatcacct
      361 gcaaggacga cacaagcaag gtcaccaact tcaacatctc ggtcgcggtc accgacgcct
      421 tcatggaggc ggtggaaacc gacagtcgct acgacctgat ccatccgaaa accggagagg
      481 tgacggggca gcttcgggcc cgcgaggtct gggccctgat cattcatggc gcctggaaga
      541 ccggtgagcc cggcgtgttc ttcatcgaca aggccaacta ctacaatccg gtcccccacc
      601 tgggacagta cgaggccacc aacccgtgtg gagagcagcc gctgctgccc tacgacgtat
      661 gcaacctggg ctcgatcaac ctcggcgcct ttgtcacggg agctccccag gcggggccgc
      721 ttagcaccaa ggaccagctc gcggcagcgc tcgaccgggt ggactgggct cagctccgtc
      781 gcgtgatcca tctctcgacc cacttcctcg agaacgtgat cgacgcaaac cagtacccgc
      841 ttccggagat caccgagctg gcccagcgca ttcggcgcat cggcctggga gtgatgggac
      901 tcgccgatgt cttcgtgaag ctgggaattc cttacgattc cgaagagggg gtcgaggtcg
      961 gtcggagact ccagcgcttc gtggacgaag aggccaaggt cgaatcggaa cggctggcgc
     1021 gcgagcgtgg ggtctttccc gagtgggagc ggagcatctg gggtcccgac gggacctgcg
     1081 cccgcaacgc tgccggtgaa cggatccgcc ccatgcgccg gctgcgaaac tgcaacgtca
     1141 ccaccgtggc tccgaccggc accatctcga tcatcgccgg ctgcagctcg ggaatcgagc
     1201 cgcttttcgc cgtggcattc atgagaaacc aggccggggt cctgatgccg gatgtcaacg
     1261 aggactttgt ggccatagcc aagttggagg ggtggtactc cgacgatctc atgcgccgca
     1321 tcgcggaggc gggacacatc gagttcccgg aggtgccggc ccggtggcag cgggtcttcg
     1381 tgacggcaaa cgccatcaag ccggagtggc acatccggat gcaggcggca ttccaggagt
     1441 tcaacgacag cgccatctcc aagacctgta actttgccca cgatgccagc gaagagtatg
     1501 tcgaggagat ctaccgtctg gcctatcggt tgaactgcaa gggtgtgacg gtgtaccgcg
     1561 acggcagccg ggagatgcag gtgctgtcga ccggatctac cgccaagaag gtggtggcag
     1621 gttccgcccc ggccgctcca gctgctgttt ccgccgatct gcacggcgag ctggccgagc
     1681 tgcgggcgga caatgagcgc ttgcagcggc tggtgcacga gctggagtcg gagaatctcc
     1741 aacgccggca aaagcggtcc cggccggaag tgctccgggg aa
//
LOCUS       DASRPQ010000441         1540 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_50608, whole genome shotgun sequence.
ACCESSION   DASRPQ010000441 DASRPQ010000000
VERSION     DASRPQ010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50608"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1147)
                     /locus_tag="VFD73_05230"
     CDS             complement(<1..1147)
                     /locus_tag="VFD73_05230"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HZI73420.1"
                     /translation="MAQLEPPSAGGTVALDQELRMLGHYKRVLMIGAHPDDEDTELLT
                     VLVRGMGAEAAYLSLNRGEGGQNLIGPELGEALGLLRTEELLAARRLDGARQYFTRAY
                     DFGYSKTLDETWQHWPREEILKDVVRIVRKFRPQIIVSIFSGTPRDGHGQHQAAGWAA
                     REAFHVAGDSLRFPELAGEGLVPWTPLKFYRSARFDTGSTTLTIEGGVLDRAVGKSFH
                     QIAMAGRSLHRSQDMGQLQQLGPSKVRLSLVEDRTGSGNGGLFAGIDTSLAAMPLGER
                     RLVSGTASLVGHSDVPAVLRRYQTRVDSLRAAVPGDNARARQLAARAARDLEEAVVGT
                     GRGDTVERGRFYTRGIEVSDQMAHLNAAAGYLSRVIFDALVDDDRVVA"
     gene            complement(1270..>1540)
                     /locus_tag="VFD73_05235"
     CDS             complement(1270..>1540)
                     /locus_tag="VFD73_05235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73421.1"
                     /translation="LGMGLVALVHWGVRDPVVRYALLPVFLVFEVLFYGLLEVFSERT
                     NELFPFWAVVVANTLAAACMGLYLWSRHPDFRAACRDIPLGDAPQ"
BASE COUNT          313 a          496 c          485 g          246 t
ORIGIN      
        1 ctgcgaccac ccggtcatca tcgaccagag catcgaagat cacgcgactc agatagccgg
       61 cggcggcatt caaatgcgcc atctgatcgc tcacttcgat gcctctggtg tagaaccttc
      121 ctcgttccac ggtatcgccc cgcccggtcc ctactaccgc ctcctccaga tctcgagcgg
      181 cccgagccgc cagctggcga gctctggcgt tgtcgccggg cacggcggcg cgcaaggaat
      241 cgactcgcgt ctggtatcgg cggagcacag cgggcacatc actgtgtccc accaggctgg
      301 ccgtgccgct gaccaggcgg cgctcaccca gcggcatcgc cgcgagcgag gtgtctatac
      361 cggcaaacaa cccgccgttt ccgctaccgg tccggtcctc gaccaatgac agccggacct
      421 tggatgggcc gagctgctgc agctgaccca tgtcctgaga gcgatgcaga ctccgtcccg
      481 ccatggcaat ctgatgaaac gactttccca cggcgcggtc gagcaccccg ccttcaatgg
      541 tgagtgtcgt ggagccggta tcgaagcggg cgctgcggta aaacttgaga ggggtccagg
      601 ggaccaatcc ttcgcccgcg agctcgggaa agcgaagcga gtccccagcg acatggaatg
      661 cctcgcgcgc cgcccacccg gccgcctggt gctgaccatg tccatcgcgg ggggtcccgc
      721 tgaagatcga gacaatgatt tgggggcgga atttccggac aatccggacg acgtctttca
      781 gaatttcttc gcggggccag tgttgccagg tctcgtccaa ggtcttggaa tatccgaagt
      841 cataggcccg ggtgaaatac tggcgagcgc cgtcgagccg gcgcgcagcc aggagctctt
      901 cggtgcgaag aaggccgagt gcttctccca gctccggacc aatcaggttc tgtccaccct
      961 cgccgcggtt gagcgacagg taggcggctt cggcgcccat tccccgaacc aggaccgtca
     1021 atagctcggt atcctcgtcg tcaggatgag ccccgatcat cagcacgcgc ttgtagtgcc
     1081 ccagcatgcg gagttcctgg tcgagtgcga cggtgccccc ggccgaggga ggctcgagct
     1141 gggccaacag acacggtgcg aagggaagtg aggtgaagag aagcaggaca gctgtagcga
     1201 ggtatcgccg atgcacagac ccggccgcaa tgaagtgaag ctggaaacta atgcggtcca
     1261 gaggttacgt cattgcggag cgtcccccag cgggatgtcg cggcaggcag cccggaagtc
     1321 gggatggcgg gaccagaggt agaggcccat acacgcggct gcgagagtat ttgccaccac
     1381 gactgcccag aacggaaaga gctcgttggt ccgctccgaa aaaacttcca ggagcccgta
     1441 gaagaggacc tcgaagacca gaaacaccgg tagcaacgcg tagcgaacca ccgggtcccg
     1501 cacgccccag tgcaccagag caaccaggcc catgcccaga
//
LOCUS       DASRPQ010000442         2523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4124634, whole genome shotgun sequence.
ACCESSION   DASRPQ010000442 DASRPQ010000000
VERSION     DASRPQ010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2523
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4124634"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1194)
                     /locus_tag="VFD73_05240"
     CDS             complement(<1..1194)
                     /locus_tag="VFD73_05240"
                     /inference="COORDINATES: protein motif:HMM:TIGR01499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HZI73422.1"
                     /translation="MSLSYQEALDFLFPRTTTIKFGLATTRALLRSLGNPHEVMPSIH
                     IGGTNGKGSVSTLIAAALEEAGWRVGLYTSPHLVSFRERIQVSGVPISEDAVAMWTER
                     LLSPILERKATFFEATTALAFADFAARGAEIAVIEVGLGGRLDSTNVVQPLVSGVTKI
                     ARDHMKYLGDTLELIATEKAGIAKPGVPFVIGERDPALVEVLRREARRAVARTGRAPA
                     DIRVLPADYEWCGPLSLAGPHQRRNAAVAQGILCALPAPYRPTQHQIEHAFGGARVPG
                     RLDRRGRWLFDVAHNPDGMRALVAALEVMRLPRPLHALVSILGDKDWTDMLVQLDQSI
                     DRGILTSAPTAAARGWDIDWLSRWLRDPSRPPAHAEWTLVPDFNEAIARVQEDAGTIL
                     VTGSFH"
     gene            complement(1279..2145)
                     /gene="accD"
                     /locus_tag="VFD73_05245"
     CDS             complement(1279..2145)
                     /gene="accD"
                     /locus_tag="VFD73_05245"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HZI73423.1"
                     /translation="MAWFKKERKPRTSQRERLEIPADAWEKCDACGHIDIREKFEKAL
                     NVCPECGKHRRIGAEDYIQLLTDPGTWRELYTELRSADPLEFENYAERLDAARQKAGD
                     TDAVYTGTAKLDGLPFNLAVMNFRFMGGSMGSVVGEKIARLARRSLEKKIPLVIVSTS
                     GGARMQEGVLSLMQMAKTSAAIAQLHRECIPYISILTDPTTGGVSASFAMQGDVVLAE
                     PGAVVGFAGQRVIKQTIGQDLPDGFQTAEFLLEHGQIDDVVPRASLRDTTARLLRHMQ
                     GQRPHVELAELS"
     gene            complement(2259..>2523)
                     /locus_tag="VFD73_05250"
     CDS             complement(2259..>2523)
                     /locus_tag="VFD73_05250"
                     /inference="COORDINATES: protein motif:HMM:NF013279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HZI73424.1"
                     /translation="LSLFLVLLRVARRATDSFSSLAVFGIIGLFFTHVFENVGMTVNL
                     MPITGIPLPFFSYGGSFFIICSLCLGLALRVAWDSRLSGYTEG"
BASE COUNT          473 a          798 c          810 g          442 t
ORIGIN      
        1 atggaacgag ccggtgacca agatggtccc ggcgtcctcc tgtacccggg cgattgcctc
       61 gttgaaatcc ggcaccagcg tccactcggc gtgggccggc ggacgcgagg ggtcgcgcag
      121 ccagcggctc agccaatcga tgtcccagcc ccgcgctgcc gccgtcggcg cgctggtgag
      181 aatgccgcga tcgatcgact ggtccagttg caccagcatg tcggtccagt ctttgtcgcc
      241 cagaatggag acgagagcat ggagcggccg gggcagtcgc atgacctcca gcgccgccac
      301 cagtgcacgc atgccgtcag ggttgtgcgc cacatcgaac aaccaacggc ctcgccggtc
      361 gagtcggccg ggaactcgcg cgcctccgaa ggcgtgctcg atctggtgtt gagtcggtcg
      421 gtacggcgcc ggcagcgcgc agagaatgcc ctgggccacc gctgcgttcc gccgttgatg
      481 cggaccggcc aggctcagcg gcccgcacca ctcgtagtct gcgggaagca cccggatatc
      541 ggccggcgcc ctgccggtac gtgcaacggc tcgcctggct tctcgccgca gcacctcgac
      601 cagcgcggga tcgcgctctc cgatcacgaa cggcacgccc ggcttggcaa ttcctgcctt
      661 ttcggtggcg atcagctcca gagtatcgcc gagatacttc atgtggtccc gcgcgatctt
      721 ggtgactcca ctgaccagcg gctgaaccac gttggtactg tccaaccggc cacccagtcc
      781 tacttcaatc acggcaatct ccgctccccg agcggcaaag tcggcaaagg caagcgccgt
      841 ggttgcctcg aagaaagttg ccttgcgttc caggatcggt gagagcaacc gttcggtcca
      901 cattgccacg gcgtcttcgg aaatggggac gccgcttacc tgaatccgct cgcggaacga
      961 caccaggtgc ggcgaagtgt acagtcccac ccgccagccg gcttcctcga gtgcggctgc
     1021 aatcaacgta ctgacgcttc ccttgccgtt ggttcctccg atgtgaatcg atggcatgac
     1081 ctcgtgcggg ttgcccagcg atctcagcag ggcacgcgtg gtcgcgagac cgaatttgat
     1141 ggtcgtcgtg cggggaaaca ggaaatcgag agcttcctga tagctgagtg acatcgaatc
     1201 cgcttggagg ttccgcaaac gattgcgccc cagccggcga gagtcgtcgg tggggcgcga
     1261 gaccggcgcg gccgggcctc agctcaattc agcgagctcg acatgaggac gttggccctg
     1321 catgtgacgc agcagccggg cggtcgtgtc gcggagcgag gcgcgcggta cgacgtcgtc
     1381 gatctgcccg tgctccagca gaaactcagc ggtctggaag ccgtcgggga gatcctgtcc
     1441 gatggtctgc ttgatcacgc gttgcccggc aaatccgacc acggcacctg gctccgccag
     1501 gaccacatcg ccctgcatgg caaaggaggc ggagacgcca ccggtggtgg gatcggtcag
     1561 gatcgagatg tagggaatgc actcccggtg aagctgggcg atggccgccg aagtcttggc
     1621 catctgcatg agtgagagga ccccctcctg catgcgggcg ccaccggagg tagaaacgat
     1681 gacgaggggg atcttcttct ccagcgagcg gcgggccagt cgcgcgatct tctcccccac
     1741 caccgagccc attgaccccc ccatgaacct gaagttcatg acggccaggt tgaaagggag
     1801 tccgtcgagc ttggcggtgc cggtataaac cgcatcggtg tcacccgcct tctgccgggc
     1861 ggcatccaga cgttctgcat agttctcgaa ctcgagtggg tctgccgagc ggagctcggt
     1921 atacagctcg cgccaggtgc ccgggtcggt taacagctgg atgtagtctt cggcaccgat
     1981 ccggcggtgt ttgccgcact cgggacagac gttcagcgcc ttctcgaact tctcccggat
     2041 atcgatgtgt ccgcaggcat cgcacttctc ccacgcgtcg gcgggaatct ccaaccgctc
     2101 gcgctgggaa gtccgaggct ttcgttcctt cttaaaccat gccatcacgg ccatagggaa
     2161 gtagggagcg agggtgatcg tacgacatgg ggctctttcg gtgcatggaa tttcatcggg
     2221 gccactctcc cgcgccagac ccttcggcta acctgctgtc agccctcggt atagcctgag
     2281 agcctcgagt cccatgccac ccgcagggcg agcccgaggc agagtgagca gatgatgaaa
     2341 aacgagccgc cgtacgagaa gaacggcaag ggaatgccgg tgataggcat caggttcacg
     2401 gtcatcccga cattctcgaa gacgtgagtg aagaagagcc cgatgattcc gaacacggcc
     2461 agactgctga aggagtcggt ggcacgacgg gcaacccgaa gcaagacgag gaaaagcgac
     2521 agg
//
LOCUS       DASRPQ010000443         1419 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2570404, whole genome shotgun sequence.
ACCESSION   DASRPQ010000443 DASRPQ010000000
VERSION     DASRPQ010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1419
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2570404"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(531..809)
                     /locus_tag="VFD73_05255"
     CDS             complement(531..809)
                     /locus_tag="VFD73_05255"
                     /inference="COORDINATES: protein motif:HMM:NF025039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase N-terminal
                     domain-containing protein"
                     /protein_id="HZI73425.1"
                     /translation="MPEPMGKLGTVMVNGPEGDVLDWGAVDWRQAEDDVRRLRQRIFT
                     ASKAGDLKKVRSLQKLTAPRGALSYPRCSREELEGRFLGLMADLDPKW"
BASE COUNT          218 a          539 c          389 g          273 t
ORIGIN      
        1 gggttgaaca actgccggta gagttcgttc aacggcaggc cacgcctgcc gcggtcacgg
       61 aggacaccca gtaccgtttc ggcgtcttgc atttcgcata cctttcggcc ctcggatatc
      121 cagtcacctg gcccccttcg cccgactgtg gacggccttc ccgccctccc tggtgcggcg
      181 ttactcgcac gactactacg gcgcctgtgt caccttaggg ctcgcgcccc ttaggcgatc
      241 ccacgttcgt ccctgtcata cgtgatagcg cggtttaggc tccacactca tctccttgaa
      301 taccctcact gggcatcgct ccgcaccccg aaggttgcat cgaccagctg atgaggccga
      361 cgcaggatgc ggcaccggtt tcaggcgtct ttccggcggg cgtgcagttg caccttctgg
      421 agattgtggt acaggcaatc cagctttagc catgccgcgc gggtcccgca acgcgccgtt
      481 tcatacgcct gaacacgacc gttgctttcc tggcatgcta tggtccccca tcaccatttc
      541 ggatcgaggt cagccatcag acccaggaac ctcccttcga gttcctcccg gctgcaccgg
      601 ggatatgaca aggcgcctcg tggcgcagtc aacttctgca aactacggac cttcttcagg
      661 tcccccgcct tgctcgccgt gaagatccgc tgccgcagcc gccgtacgtc gtcctcggcc
      721 tggcgccagt ccacggcgcc ccagtccagg acatcgccct caggtccgtt caccatgacg
      781 gtgcccaact tgcccatcgg ttccggcatc tccattcacc aggtccacac aggctcacct
      841 gacccacgtc agctcccttt cgggccgggc agccgcccgt atccggccag ttatccggga
      901 accgccagcg gaggcgctgg catgcggtcc ccggtttcct gccgcctttc ggccaccggc
      961 gttcgcttct tgggtcatcc tgcgcccgct ggggaactca gccttcctca cagtcggccc
     1021 accagcggag caagcccgcc ggaccccaac ggggttgtcg tgttgcacat gagcaagaca
     1081 caaccgggca gggtgctctc tttaccccgg ggacggtggt gcgctcccgg ccagcgacta
     1141 ccttccggcc ggcacctgcc gctctcctgc ggccagtccc tacggccccg ctgaaacatc
     1201 ccatcggcga ggtgcacttt cacgaggcgt caacgagagt tcacgctatt cacccatcac
     1261 cccggatccg gctggctgcc ggcccccgag ccgagaaccc ctccgggctc ccgccggtct
     1321 tctcctcgcc cgccaccctg gatggaacac gagcggcttc ggcttttacc ccgggctccg
     1381 caccccgcag ttacccgcgg cgcacgccag ggcggagac
//
LOCUS       DASRPQ010000444         1117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_991441, whole genome shotgun sequence.
ACCESSION   DASRPQ010000444 DASRPQ010000000
VERSION     DASRPQ010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_991441"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..339
                     /locus_tag="VFD73_05260"
     CDS             <1..339
                     /locus_tag="VFD73_05260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73426.1"
                     /translation="TVPAHQWMFSEHDVALHHFRRYSKASIRSLLEGTGMKIRRLSYW
                     NASLFPLICLSRLVKAGRSSADARSDTAGAAPWWLNQTLAGVLASEAALLRRVSLPWG
                     VSLVAMAQRM"
     gene            complement(310..>1117)
                     /locus_tag="VFD73_05265"
     CDS             complement(310..>1117)
                     /locus_tag="VFD73_05265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73427.1"
                     /translation="FHETSGKILLVVLVGSFSLLVLYRPRPTLPRLLLVCAGALLALM
                     ALRNVPLFGLTAVPVLALHTDPLWRSLPYGREVRRRFETTARATRTLPWVLGATALLL
                     VLCLAQGRVGSVQLIQLGFDKTIFPVTAVAEARRHRLDGRLFTEFVWGGYILYAWPEQ
                     RVFIDGGTDFYGEDLFREYTRIKRMSPGWRDDMAKRDISLLLLERDKPFTYEIARDAS
                     WSMWYCDSLAVVFRKSSSGSERAAERGDSVDRALNDCGQRSSHPLGHRHE"
BASE COUNT          233 a          338 c          349 g          197 t
ORIGIN      
        1 accgttccag cccatcagtg gatgttttcg gagcacgacg tggcactcca tcattttcgc
       61 cggtacagta aagcgtcgat ccgaagtttg ctggagggca ccgggatgaa gattcggcgg
      121 ctctcgtact ggaatgcctc actctttccg ttgatctgcc tcagccggct ggtgaaagcg
      181 ggacgctcca gtgccgacgc gaggtccgac acagcaggcg ccgctccctg gtggctcaat
      241 cagacgctcg ccggcgtgct cgcgagcgag gcagcgcttt tgcggcgtgt ctcgctcccc
      301 tggggcgtat cactcgtggc gatggcccag cggatgtgaa ctgcgttgcc cgcagtcatt
      361 cagtgcccgg tcgacggaat cgccacgttc tgcggcacgc tctgatcctg aactggattt
      421 acggaagacg actgcgaggg aatcgcagta ccacatcgac cagctcgcgt ctcgcgcaat
      481 ctcgtaggtg aaaggcttat cccgctccag cagcagcagc gagatgtcac gcttggccat
      541 gtcgtcacgc catcccgggc tcattcgctt gatccgcgtg tattcacgga agagatcctc
      601 accataaaag tcggtgccac catcgatgaa tacccgttgc tcgggccagg cgtacaggat
      661 gtatccgccc caaacgaact cagtgaagag ccttccgtcg agccgatgcc ggcgcgcttc
      721 ggcgacggcc gtgaccggaa agatggtctt gtcaaatccg agctgaatga gttgcaccga
      781 gcctacccgt ccctgggcaa ggcacaacac gagaagaagt gcggtagctc ccagcaccca
      841 gggcagcgtg cgggtagccc gggctgttgt ctcaaagcgc cgccgcactt cacgaccata
      901 cggtagcgag cgccagagtg ggtcggtgtg cagggcaagc acgggcaccg cggtcaaccc
      961 aaagagggga acattccgca gggccatcag ggcgaggaga gcaccggcgc agaccaagag
     1021 aagccgaggg agtgtaggcc tgggccgata caggacgagg agcgaaaacg atccaaccag
     1081 taccacgagc aggatcttgc cgctggtttc gtgaaag
//
LOCUS       DASRPQ010000445         1518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1304716, whole genome shotgun sequence.
ACCESSION   DASRPQ010000445 DASRPQ010000000
VERSION     DASRPQ010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1304716"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            174..509
                     /locus_tag="VFD73_05270"
     CDS             174..509
                     /locus_tag="VFD73_05270"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HZI73428.1"
                     /translation="MSKPTDLVQGTLDLLLLKILALEPLHGWAISQRLKQVSGDVLQV
                     SEGSLYPALHKLEQEGWIKAEWKVTQNNRRAKFYSLTRPGRKHLQAEAANWTRLSDAI
                     SAVVRLEEA"
     gene            513..>1518
                     /locus_tag="VFD73_05275"
     CDS             513..>1518
                     /locus_tag="VFD73_05275"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI73429.1"
                     /translation="MRMERWPYAARHFLRALFQRNRVERELDEELRYHLEERIQNDIA
                     CGVPPAEARAAALRDMGGIEFRKEECRDMRKSRLAEQFLQDVRYGLRSLARSPVFTAV
                     TVLSLALGIGANTAIFSLMDKLLLESLPVENPRELVLLNPQGFQNGWTAGDMMWSYAV
                     YTGIRDAQRVFTGVLAERAETVNLTLNNATQRATARIVSGNYFAVLGVRALVGRVFSD
                     EDDRVRGGHPLAVISYGFWVEQFGSRPDVLGQTIRINRHPFTIIGVSEKGFSGLEIGE
                     TVDVFVPAAMLRETTTYGQALDMRSAYIWQVYGRLKPGVTRQQAATQLQPLYLAQLEQ
                     D"
BASE COUNT          279 a          414 c          550 g          275 t
ORIGIN      
        1 aagggcgcgc ttcgcgcgct cgagcgttcg attggctcgc aggcctggag gcccgcgcta
       61 cggtggcgga ggtctccggc gtcaggtaga ggaaattcac ccggacgtgg gggagctccc
      121 cttgtttacc gagagaaact cggatagaat gaacctcggt aacctaggga agaatgagca
      181 aaccaaccga tcttgtccag ggcacgctgg acctgctgct tttgaagatt ctcgcgctcg
      241 agccgctgca cggctgggcg atcagccagc ggctgaaaca agtctccggc gatgtcttac
      301 aggtgagcga gggctcgctg tatccggcgc tgcacaagct ggagcaggag ggctggatca
      361 aggccgagtg gaaggtgacg cagaacaacc gccgcgccaa gttctactcg ctgacgcggc
      421 cggggcggaa gcatctccag gctgaggccg ccaactggac acggttgtcc gacgcaattt
      481 ccgcggtggt gcggctcgag gaagcataag ccatgaggat ggagcgctgg ccgtatgcgg
      541 ctcgccattt tctgcgggcg ctgtttcagc gcaaccgggt ggagcgcgag ttggacgaag
      601 agctgcggta ccacctggag gagcggatcc agaacgatat tgcgtgcggt gtgccgccgg
      661 cggaggctcg agccgcggct ttgcgcgaca tgggcggaat cgagtttcgg aaggaggagt
      721 gccgcgatat gaggaagtcc cggctggcgg aacagtttct gcaggacgtt cgttacggtt
      781 tgcggtcgct ggcacggagt ccggtgttca cggcggtgac ggtgttgtcg ctggcgttgg
      841 gaatcggcgc caacacggct atcttcagcc tgatggacaa gctgctgctg gagtcgctgc
      901 cggtggagaa tccgcgcgag ctggtcctgc ttaaccccca gggctttcaa aacgggtgga
      961 cggccggaga catgatgtgg tcgtacgcgg tgtacacggg aattcgcgat gcgcagagag
     1021 tcttcacggg agtgctggcc gagcgcgccg agacggtgaa cctgacgctc aacaacgcga
     1081 cgcaacgcgc cacggcgcgg atcgtgagcg ggaattattt cgcggtgctg ggcgtgcgtg
     1141 ccctggtggg ccgcgtattc tccgatgagg acgatcgggt tcgcggcggt cacccactcg
     1201 cggtcatcag ctacggtttt tgggtggagc agttcgggag ccggcctgat gtcttgggcc
     1261 agacgatccg gatcaaccgc cacccgttca cgatcatcgg ggtgagcgag aagggtttca
     1321 gcggcctgga gatcggcgaa acggtggatg tgtttgtgcc ggccgcgatg ctgcgcgaaa
     1381 ccacgacgta cggccaggcg ctggacatgc gctcggctta tatctggcag gtttacgggc
     1441 ggctaaagcc cggagtgacc cggcagcagg cggcgaccca gttgcagccg ctctatctgg
     1501 cgcaactgga gcaggacg
//
LOCUS       DASRPQ010000446         1240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1618341, whole genome shotgun sequence.
ACCESSION   DASRPQ010000446 DASRPQ010000000
VERSION     DASRPQ010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1618341"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..481)
                     /locus_tag="VFD73_05280"
     CDS             complement(<1..481)
                     /locus_tag="VFD73_05280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73430.1"
                     /translation="MARDSGKVHVVRVRKTGYVDKQGRPRDYSSAYLRRTYREAGTVK
                     NETVANLSALPDHVIDLIDAGLKGRQLVPAGQAVTITRSVPHGHVAAAHAMAGELGLP
                     ALLGPAGRHRDLALALIISRVIKPGSKLSTLAWWADTTLGADLGVAEASTDDIYAAMD
                     "
BASE COUNT          226 a          359 c          394 g          261 t
ORIGIN      
        1 agtccatcgc ggcgtagatg tcatcggtgc tggcctcggc cacgcccagg tcggcgccca
       61 gcgtcgtgtc cgcccaccag gccagcgtgg acagtttcga gcccggcttg atcacccggg
      121 agatgatcag cgccagggcc aggtcccggt gccgcccggc cgggccgagc agcgcgggca
      181 ggccgagctc gccggccatg gcgtgcgccg cggcgacgtg gccgtgcggc accgaccggg
      241 tgatggtgac cgcctgcccg gcgggcacca gctggcggcc tttcagcccg gcgtcgatca
      301 ggtcgatgac gtggtccggc agcgcggaca ggttggccac ggtctcgttc ttgaccgtgc
      361 cggcctcccg gtaggtgcgc cgcaggtagg ccgaggagta gtcccggggc cggccctgtt
      421 tgtcgacgta cccggtcttc cggactctga ctacgtgtac cttgccgctg tcgcgcgcca
      481 tagcaaaatc ttatgggaat acaggcgcat gacaccgtag cgacgcgctg attttctgac
      541 tacatcctgt gggcagatcc ggttgaagcc tcaggtcagg atgcaatacc tacggagagc
      601 tacggcaact tcggcttaga tggagagcag taaatctggc accttgagac tgcattcccg
      661 gtttttaatg ttgaaataat tccatctgcg gtctggcgcg caggaccggt gtttgcccat
      721 tccgtctaat ttatcgtaat atattgtccg tggctacgga tcgcgcggat gctgctcggt
      781 ggtgtgcctg acgaaattgg tagccttact tgcccacgct ctgaataggt gctggaaata
      841 ttcaggtatc ggaagctctg gcagctgagc atccggctca tgatcccagc gccggagaat
      901 gtacgggtat aggtcgctga aagcgcccaa cggtgagttc ttgtcactcg ggagaattct
      961 gttgcaggtt atttctgccg tgataaggag tgtggccgca ataccgagat atacaaccgg
     1021 gtcagtcgtc gagaatagat cccgcgctct agtgtattct tgttcggcga ataggctgaa
     1081 aggttcccac cgggatgcaa ggcatactga tagccatggt ggtgtgggat ggctgatcag
     1141 gaacccgcca acagcagcga agtcctcatt catgctgtct tcggtagcct ggggcaagcc
     1201 agagtgaact acccggcccc acgctcttgc cgcagcccct
//
LOCUS       DASRPQ010000447         4328 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4439505, whole genome shotgun sequence.
ACCESSION   DASRPQ010000447 DASRPQ010000000
VERSION     DASRPQ010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4328
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4439505"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..358)
                     /locus_tag="VFD73_05285"
     CDS             complement(<1..358)
                     /locus_tag="VFD73_05285"
                     /inference="COORDINATES: protein motif:HMM:NF023144.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylpyruvate isomerase N-terminal
                     domain-containing protein"
                     /protein_id="HZI73431.1"
                     /translation="MSDHSALTSMRPVQLVGLFPDLHHELMTLLRGLAPQAWNRPTAC
                     ARWSVQDIVAHLLDTCFRRLSLGRDQTEIAPPRPLGRYGDLVAFLNQLNAEWVIAARR
                     LSPRMLMDLMEWAEPQL"
     gene            481..1113
                     /locus_tag="VFD73_05290"
     CDS             481..1113
                     /locus_tag="VFD73_05290"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013352894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HZI73432.1"
                     /translation="MAFTLPPLPYDYKALEPHIDEQTMRLHHDKHHAAYVNNLNAALE
                     SQPDLQNKSIEELLAMLDRIPEAIRTTVRNNGGGHANHTMFWEMMAPGGAKEPGGELA
                     EAINSTFGGFTAFKEQFSKACTGRFGSGWGWLTADRSGKLAIESTPNQDSPLMAGKTP
                     VLGCDVWEHAYYLKYQNRRPDYVTAWWNVVNWSDVAARFAKARGREKAMR"
     gene            1187..1633
                     /locus_tag="VFD73_05295"
     CDS             1187..1633
                     /locus_tag="VFD73_05295"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZI73433.1"
                     /translation="MEDRTPSGSRRDEDSIQHLLSRYAQRLSRRDWSGVRSLFWQDGT
                     YAGPIAPGAPTDYHQSIPIDAAIRSLDHWLRGVEPQNFDVRVLRTDLRQEGDLAAAWL
                     FTHRRSPSGPGSLEIDWVEHIVLRRIDGDWRILSVAVASPPRGNSR"
     gene            1666..3129
                     /locus_tag="VFD73_05300"
     CDS             1666..3129
                     /locus_tag="VFD73_05300"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI73434.1"
                     /translation="MAKLLNSGREADDTLVAVAGALQTGLPAEQVALWYRDTRTGAFR
                     AAGSPAQANGKVVESLEALDSNGPGCRLRLEHEESLMGLLQVRPDLEPQQRKTLTVVA
                     DLLAPFLASVALSADFAVEVAAQSREMQEQRRFISLIIDSLPIGLYVVDRDYRIQLWN
                     RQREVGSPLRRDEVVGRQVFEVLTRQPQEELRAEFDRVFQTGEILQDELEVTVGGEVR
                     AFRLSKIPMRLEGDRISHVITIGEDVTESRRIQGQIMQSEKLAAIGQLAAGVMHEINN
                     PLATISACVAAIEGRIGAMTSAEKTAVEEYLEIIDKEVDRCTRIVDGLLDFSRPKGKS
                     KGKVVLNSVVEETLFLLKHHQRFKRLTVVRELDSSIPATHANPEQLTQVLMALMLNAV
                     DAMDDRRGRLTVRTGRNPNQNDEVVVEIEDNGTGISRADQAKIFEPFYTTKPPGRGTG
                     LGLSICYGIVEDHRGRIEVDSQPGRGSIFRVFLPVHQ"
     gene            3126..3794
                     /locus_tag="VFD73_05305"
     CDS             3126..3794
                     /locus_tag="VFD73_05305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HZI73435.1"
                     /translation="MKILVVEDDRTVGQYVKRGLEEQRYHADLVEDGMEGLRLASGGR
                     YDLIVLDLRLPEMNGLEVLRTLRDRGNTTPVLVLTAQDAVDFKVQALRSGADDYVTKP
                     FAFEELLARVEALGRRPKEIRSPVLRVGDLELDMETREVRRAGEPIELTPKEYTVLEY
                     LMRHAGRVMSRTLITEYAWDYHFDPGTNIVDVVINRLRKKVDSGHAQKLVHTVRGVGY
                     VVKA"
     gene            3796..>4328
                     /locus_tag="VFD73_05310"
     CDS             3796..>4328
                     /locus_tag="VFD73_05310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73436.1"
                     /translation="MATIRRRLTLWYTVALAATVLAFGTALYLERRQASARELDQRLE
                     IESDLAQRWLTQSYKVLGRIVTMANMKPSLDPAISAYLEAARDYLIVTDTAGQVLALS
                     DVTRSLNGPALERLSAPLDTLPLRPHSGVLSLGSPVGSVRYRVTPVDSAGSGIGGLLV
                     ATPVNQASFGPSDLLRS"
BASE COUNT          822 a         1350 c         1408 g          748 t
ORIGIN      
        1 gcagctgtgg ctcggcccac tccatgaggt ccatcaacat tcgagggctc agtcgtcgcg
       61 cagcgatgac ccactccgca ttcagctgat tcagaaaggc gacgagatcg ccataacggc
      121 cgagaggtcg agggggagcg atctccgttt gatcccgccc cagcgagagc cggcggaaac
      181 aggtgtccag caaatgcgcg acgatgtcct gaaccgacca gcgggcgcac gcggtgggcc
      241 gattccaggc ttgcggggcc aagccgcgga gaagcgtcat cagctcgtgg tgcagatcgg
      301 ggaagaggcc gaccaactgc accggacgca ttgaagtcag tgcggagtga tcagacacga
      361 tcggcctgcc cgggggcttg cggccacgct catcgtcgtt gaccccattt gggcacggaa
      421 tgatatttcg cgccagcgag aatgttgatc acgagaggtc ctttgcgcga ggagtcggtc
      481 atggcgttca cccttccccc tctgccctac gactacaagg cgcttgagcc gcacatcgac
      541 gagcagacca tgcggctgca tcacgacaag catcatgcgg cctatgtcaa caacctgaac
      601 gcggcgctcg agtcgcagcc cgacctgcag aacaaatcca ttgaagagtt gctggcgatg
      661 ctggaccgca tcccggaagc gatccgcacc acggtccgga acaacggcgg cggccatgcg
      721 aatcatacga tgttctggga gatgatggcg ccgggtggtg ccaaggagcc cggaggtgag
      781 ctggccgagg ccatcaacag caccttcgga ggattcaccg ccttcaagga acagttctcg
      841 aaggcgtgca ctggccggtt cggcagcggc tggggctggc tcaccgccga ccggagtggc
      901 aagctcgcca tcgagagcac gcccaatcag gacagtccgt tgatggcggg aaaaacaccg
      961 gtgctcggct gtgacgtgtg ggagcacgcg tactatctca agtatcagaa ccgccggccc
     1021 gactacgtga cggcatggtg gaacgtggtc aactggagcg atgtcgccgc gagattcgcg
     1081 aaagcccggg gccgcgagaa ggccatgagg tagcgcgcca atccgcctga gcggcaccag
     1141 gtttctcgcg ctctacgtcg gcatcctggc agtcaccggg tgccgcattg aagatcgtac
     1201 cccctccggc agccgtcggg acgaggacag catccagcat ctgctcagcc ggtacgcaca
     1261 acggctgtct cggcgcgact ggagcggggt gcgctcgttg ttctggcagg acggcacata
     1321 cgccgggccc atcgcaccgg gcgctccgac cgattatcac cagtccattc cgatcgatgc
     1381 ggccattcgg agtctcgatc attggctccg cggcgtcgag ccgcagaatt tcgacgtccg
     1441 ggtgctgcgt actgatctgc ggcaggaagg cgacctcgcc gcggcctggt tatttactca
     1501 ccgccgcagc ccttcgggac ccggttcgct cgagatcgac tgggtcgaac acatcgtgct
     1561 ccgccggatc gacggagact ggcgcatttt gagcgtggcc gtggcatcac caccccgagg
     1621 aaattcccgc tgagcgcgtc ggacggcttg gcgctggttg ggacggtggc caagctcctg
     1681 aacagtggcc gggaggccga tgatacgctg gtcgccgtgg ccggcgccct gcaaaccggt
     1741 ttacccgccg aacaggttgc gctctggtat cgggataccc gaaccggcgc cttccgcgct
     1801 gccggctcgc cggcacaggc gaacgggaag gtggtcgagt cgctcgaggc gctcgattcg
     1861 aacggcccgg gttgccgtct tcggctggag cacgaagaaa gcttgatggg cttgctccag
     1921 gtgcgtcccg acctggagcc ccagcagcgc aagaccctca ccgtcgttgc cgatctgctc
     1981 gctccgttcc tggcctctgt ggccttgtcc gccgacttcg ccgtcgaggt ggccgcccag
     2041 tcgcgagaaa tgcaggagca gcgccgcttc atcagcctca tcattgatag cctgccgatc
     2101 ggcctgtatg tggtggaccg cgactatcgg attcagctct ggaatcggca gcgtgaggtc
     2161 ggttcaccac ttcggcgcga cgaggtggtc gggcgccagg tcttcgaggt cctgactcgg
     2221 caaccccagg aggagcttcg ggcggaattc gatcgggtgt tccagaccgg cgagatcctg
     2281 caggacgagc tggaggtgac ggtaggaggc gaagtgcgag catttcggct gagcaaaatc
     2341 ccgatgcgcc tggagggaga tcgcataagt cacgtcatca ccatcggcga agacgtgacc
     2401 gaatcccggc ggatccaggg ccagatcatg cagagcgaaa agctcgccgc catcgggcag
     2461 ctcgccgccg gcgtgatgca cgagatcaac aacccgctcg ccaccatcag cgcctgcgtc
     2521 gccgcgatcg aaggacgcat cggggcgatg acatcggcgg agaaaactgc agtcgaggag
     2581 tacctggaga tcatcgataa ggaagtggat cgctgcacca gaatcgtgga cggactgctc
     2641 gatttcagcc ggcccaaggg gaagagcaaa ggcaaggtgg tgctcaacag cgtggtggag
     2701 gagacgttgt ttctgctcaa gcatcaccag cgcttcaaac gcctgaccgt agtccgcgag
     2761 ctggactcat ccattccggc gacacacgcc aacccggaac agctgaccca ggtccttatg
     2821 gcattgatgc tgaatgcggt ggatgcgatg gacgatcgcc gaggacggct cacggtgcgc
     2881 accggccgca acccaaacca aaacgacgag gtggtggtcg agatcgaaga caacggcacc
     2941 ggcatttcgc gggccgacca ggccaagatc ttcgagccct tctataccac caagccgcca
     3001 ggacggggca ccggtctcgg actctcgatc tgctatggta ttgtcgagga ccaccggggt
     3061 cgcatcgagg tcgacagcca gccgggacgc ggatccatct tccgggtgtt tctgccggtc
     3121 caccagtgaa aattctcgtg gttgaagacg atcgtaccgt aggccagtac gtcaagcgcg
     3181 gactggagga acagcgctac cacgccgacc tcgtggagga tggcatggag ggacttcggc
     3241 tcgcctctgg tggccgttac gatctcatcg tgctggattt gcggctgccg gagatgaacg
     3301 gcctggaggt gctcaggacg ttgcgcgatc ggggaaacac gacgccggtt ctggtgctca
     3361 ccgcccagga tgcagtcgac ttcaaggtgc aggcactccg ctcgggcgcg gacgactacg
     3421 tcaccaagcc atttgcattc gaggaactgc tggcccgggt ggaggcattg gggcggcggc
     3481 ccaaggagat ccgctcgccg gtgctccggg tcggtgatct cgagctcgac atggaaacgc
     3541 gcgaggtcag gcgtgcgggc gagccgatcg agctcacccc caaggagtac accgttctgg
     3601 aatatctcat gcggcacgcc ggacgggtga tgtcgcggac actgatcacc gagtacgcct
     3661 gggattacca cttcgaccca ggcaccaaca ttgtggacgt ggtgatcaac cggttgcgga
     3721 agaaggttga ctccggccat gcccagaagc tggtgcacac cgttcggggc gtgggatacg
     3781 tcgtgaaagc ctgacgtggc caccatacgc cggcggctca ccctgtggta cacggtggcg
     3841 ctcgcggcga cagtgctggc ctttgggacc gccctctatc tcgagcggcg acaagccagc
     3901 gctcgggagc tggaccagcg cctcgagatc gagtccgatc ttgcccagcg ctggctgacc
     3961 cagtcctaca aggtgctggg ccggatcgtg accatggcca acatgaagcc ctcgctggac
     4021 cccgccatca gcgcatacct ggaggccgcc cgcgactacc tgatcgtcac cgacacggcc
     4081 ggtcaggtgc tcgcgctctc tgatgtcacc cgctcgctca acgggcctgc cttggaacgg
     4141 ctgagtgctc ccctggacac cctgccgctg cgaccgcatt ccggtgtgtt gtcgctgggc
     4201 tctccagttg gttccgttcg ctatcgagtt actccggtcg acagcgccgg gtcaggcatt
     4261 ggcggtctgc tcgtcgccac cccggtgaat caggcttcct tcggaccgtc cgacctgctc
     4321 cgctccat
//
LOCUS       DASRPQ010000448         3175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1939930, whole genome shotgun sequence.
ACCESSION   DASRPQ010000448 DASRPQ010000000
VERSION     DASRPQ010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3175
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1939930"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1104)
                     /locus_tag="VFD73_05315"
     CDS             complement(<1..1104)
                     /locus_tag="VFD73_05315"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HZI73437.1"
                     /translation="MDRRTWVARLAASGAIFALFGCGDDNSTAPDRTPALSSSSTEMH
                     ALAAEVRLLTAGRGITALSKPPAVRPALVRLGQALAFDKILSGNKDISCMTCHLPTFA
                     TSDGRSLSVGQGGTGLGPARVPPAGGFIPRNSPQVFNLFAIDQLFWDGRVSRDAVGNY
                     HTPAGAALTSAMTQVFEFGAASAQPMFPVLSREEMRGFNGNELAAISDNQEQQIWAGI
                     MARLGAIPEYRRMFQAAYPGQRFEQMTFAHASNAIAGFIIDRLSFNNSPWDRFLAGND
                     AAMSQVQLQGAKDFMTARCSVCHNGPALTDNKFHNVAVPQLGPGKGDGNGRDDFGRMR
                     ETGDAADKYAFRTPALRNVELTAPYGHDGAFFSL"
     gene            complement(1251..2900)
                     /locus_tag="VFD73_05320"
     CDS             complement(1251..2900)
                     /locus_tag="VFD73_05320"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZI73438.1"
                     /translation="MSNDRDVAFPTLTVAEVQALSVRGTRREVRTGEILYQEGDRDHS
                     FFVVLEGAVEVLDNSRGAPHQLTVHRRGQFSGDVDLMSSRVTLVTGRVIEDGAVLQLS
                     IPELRRAVDEMPDLGDKILKAFLMRRTLILADGFQGVRIIGSRFSPEAHQLRDFASRN
                     AIPIRFMDVETDHEAESILRGLGISAAETPIVLGSAGQFHRKPSIAQFANCAGLTAVL
                     EPEHVYDLIVVGAGPAGLAASVYAASEGLDVLTADALAAGGQAGTSARIENYLGFPAG
                     ISGADLTQNALIQAQRFGARITVPVSARSLGIDGGDRIVTLVDGRRLRTRCVLVASGV
                     AYRKLDVPRFSEFEGAGIYYAATEMEAKLCRGEEVVVVGAGNSAGQAVVFLSRHASRV
                     HLIVRSDDLGRSMSRYLVDRVQGLENVNICCQTVVSGLEGNGHLSAVELKTGSTRETI
                     PTSSLFLFIGADPKTDWLRNCVELDRKGFVLTGNWLPQETASNERWRAAGRSPFLLET
                     SLPGVFAAGDVRSGSTKRVAAAVGEGSMAVSFVHAHIGRPV"
     gene            complement(2906..>3175)
                     /locus_tag="VFD73_05325"
     CDS             complement(2906..>3175)
                     /locus_tag="VFD73_05325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73439.1"
                     /translation="RVVMRETLDDALAQLFGGAQARPAPEPEIVADSTAPSGPVTRDS
                     RVSTLLQQARQHYQTAIQAQRDLDWARYGEEMRRLGEVLDQLGRR"
BASE COUNT          567 a         1035 c         1009 g          564 t
ORIGIN      
        1 caggctgaag aaggctccgt cgtggccgta cggagcggtc agctcgacgt tccggagagc
       61 aggagttcgg aaggcgtatt tgtcggctgc atcaccggtc tcccgcatcc gcccaaagtc
      121 gtcacgtccg ttgccgtcgc ccttcccggg accgagctgg ggcaccgcca cgttgtggaa
      181 cttgttgtcg gtaagcgcag ggccgttgtg gcagaccgag caacgcgcag tcatgaagtc
      241 tttagcaccc tgcagctgga cctgagacat ggcggcgtcg ttgccggcca ggaagcgatc
      301 ccatggcgag ttgttgaatg acagacggtc gatgatgaag cccgcaatcg cgttgcttgc
      361 gtgggcaaag gtcatttgct cgaaccgctg ccccggatag gctgcctgga acatccgccg
      421 gtattcgggg atggcgccga gccgggccat gatgccggcc cagatctgct gctcctgatt
      481 atctgaaatg gcggccagtt cgttcccgtt gaacccccgc atctcctcac gcgaaagcac
      541 cgggaacatc ggctgagcag aggcggcgcc gaattcgaag acctgggtca tggccgaggt
      601 gagcgccgcg ccggcggggg tgtggtagtt gcccacggca tcccggctca ctcggccatc
      661 ccagaagagc tgatcgatcg cgaagaggtt gaagacctga ggggagtttc ggggaatgaa
      721 ccccccagcg ggagggactc gagcaggacc gagtccggtg ccaccctgcc ccaccgaaag
      781 gctgcggccg tcgctggtcg caaatgtcgg cagatggcag gtcatgcagg aaatgtcctt
      841 gttgccactg agtatcttgt cgaacgccag cgcctgcccc agccgcacca gggctggccg
      901 gactgccggc ggcttcgaca gggcagtgat gccccgtcct gccgtcaaca gtctcacttc
      961 cgctgccaga gcgtgcatct cggtgctgga cgacgagagt gccggagtcc tgtccggcgc
     1021 ggtggagttg tcgtcgccac agccgaagag ggcaaaaatc gcccccgacg cggccagcct
     1081 ggctacccac gtcctgcggt ccatagctcc cttacctctg caactgctgt ttggtgttga
     1141 gtggtgttgg tagagttact atgctcgttc ggaattccgg tgaatcccaa cactaatact
     1201 accggtggtt cgagctttcg ctagacaggg gcagcgcccg gtcgcgatga ctacacgggc
     1261 cggccgatgt gcgcgtgcac gaagctcacc gccatcgaac cttcgcccac cgcggcggca
     1321 acccgcttgg tcgaaccgct tcggacatct ccggcggcaa agaccccagg caggctcgtc
     1381 tccagaagaa atggcgaccg tcccgcagcg cgccagcgct cattactcgc ggtctcctgc
     1441 ggcaaccagt tgccggtcag cacaaatccc ttccgatcca gttcaacgca gttccggagc
     1501 cagtcagtct tgggatctgc gccaatgaaa aggaagagcg agctggttgg gattgtctcc
     1561 cgggtcgaac cggtcttcag ctcaaccgcg ctcaggtgac cgtttccctc gaggccgctc
     1621 acaacggtct ggcagcagat gttcacgttc tccagaccct gcacccggtc taccagatag
     1681 cgcgacatgc ttcggccgag gtcgtcgctc cggacgatca ggtggacgcg gctggcatgg
     1741 cgtgagagga atacgactgc ctggcctgcc gaattcccgg ctccgaccac taccacctcc
     1801 tcgccccggc agagcttggc ttccatctca gtagccgcgt agtaaatccc ggcaccctcg
     1861 aactcactga atcggggtac gtccagtttg cggtaggcaa cgccgctcgc caccagcacg
     1921 catcgggtgc ggagccgccg tccatccacc agggtcacaa tacggtcgcc gccatcgata
     1981 cccagcgagc gcgcgctgac cggtacggtg atccgcgcgc cgaagcgctg ggcctggatc
     2041 aacgcgttct gggtgagatc cgcgcccgag atcccggcgg ggaatccgag ataattctct
     2101 atcctggcgc tggtgccggc ctgtcctccg gcagcgagcg cgtcggcggt cagcacatcc
     2161 agtccctccg aggcggcgta cactgacgcg gcgagtcccg ccggccccgc gcccacaacg
     2221 atgaggtcgt agacatgctc cggctccagc accgccgtga gccccgcgca gttggcgaac
     2281 tgcgcgatgc tgggcttccg gtgaaactga ccggcactcc cgagcacgat cggagtctcc
     2341 gccgcggaga taccaagccc ccgaagaatc gactcggcct cgtgatcggt ctccacgtcc
     2401 atgaagcgaa tgggaatcgc gtttcggctg gcgaagtcgc ggagctggtg ggcctcgggg
     2461 gagaaccgcg agccgatgat tctgacaccc tggaatccgt cggccaagat gagtgtgcgg
     2521 cgcatgagga atgccttcag aatcttgtcg cccagatcgg gcatctcatc caccgcgcgg
     2581 cgcagctcgg gaatgctgag ctgcaggacc gcaccatcct cgatcacccg gccggtcacc
     2641 agagtgacgc ggctgctcat cagatcgacg tcgccgctga actgtccccg gcggtggacg
     2701 gtgagctggt gcggagcacc gcgggagttg tccagcactt cgaccgctcc ctcgagcacc
     2761 acgaagaagg agtggtctcg atcgccttcc tgatacagga tctcgccggt ccgcacctcg
     2821 cgccgggtgc cccggaccga gagagcctgg acctcggcga cggtgagcgt agggaacgct
     2881 acgtcgcgat cattcgacat ggtgattacc gtctgcccag ctggtccagg acctctccca
     2941 gccggcgcat ctcctcgcca tagcgggccc aatcgagatc gcgctgagcc tggattgcgg
     3001 tctggtagtg ctgccgggcc tgctgaagaa gagtcgaaac tcgcgagtcg cgagtcacgg
     3061 gtccgcttgg agcggtgctg tctgcgacga tttcgggctc tggtgcgggt cgtgcctgtg
     3121 cgccaccgaa cagttgggcc agggcatcgt ccaacgtttc ccgcatgacc acccg
//
LOCUS       DASRPQ010000449         3151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_368435, whole genome shotgun sequence.
ACCESSION   DASRPQ010000449 DASRPQ010000000
VERSION     DASRPQ010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3151
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368435"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1071)
                     /locus_tag="VFD73_05330"
     CDS             complement(<1..1071)
                     /locus_tag="VFD73_05330"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HZI73440.1"
                     /translation="MSAIPSPFSDALRERYLLERQLGQGGMATVYLAQDLKHDRYVAL
                     KVIRPELSGSFGTERFLQEIRLAARLQHPHILTVFDSGETDGRLWFTMPYVEGESLRE
                     RLRREGALPRSEALRIAREAGQALQYAHDHGVVHRDIKPENILLTRDGNTLVADFGIA
                     RASLGPTPHLTATGMIIGTPSYMSPEQAAGESDIDGRSDIYSLGCVLYEMLAGQPPFT
                     GPTAQGIIAKQLGQSPSLAASRVPRGLSPVLGRALAKQPADRFQTAAEFVRALTEPAT
                     VQPHSGVRRAGIALAAGVVLLTAILLGHRIGSRTAATGSVTPGHERKLSPITDAAGVE
                     EWPAWSPDGKQLVYSADADGFKQ"
     gene            1144..1953
                     /locus_tag="VFD73_05335"
     CDS             1144..1953
                     /locus_tag="VFD73_05335"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HZI73441.1"
                     /translation="MIRPYRVPLVLATLLGGCTPTTNLLNPATPSFSGAYAVARPDTS
                     GARQLRIVTFNVKLSQDIPGAIRVLSSDSLRGADILALEEMDDVGVERIARALKLNYV
                     YYPGIIYRNGNYFGPALLSRWPIEQSWKLLLPHEGLIRHQRRTATAAVLRIRGQRVLA
                     YAVHLETQLKISEQGRRDQVQAILDDAKGFSGPTVLAGDFNSQGIGPYLVQRGFTWVT
                     SRVGPSISVFSWDHIFVRNLSPTRSPGAGLVKDVHGASDHRPVWAVVTERA"
     gene            1970..2329
                     /locus_tag="VFD73_05340"
     CDS             1970..2329
                     /locus_tag="VFD73_05340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73442.1"
                     /translation="MSNWFRSLVGAVLTASLAMSAVTWGSMPGCTSAQASDAPAGHQH
                     GMPAHPGGPAHQAATVQCFVHLCCLQLVSLPSGTRALERSDGSGNASVPPPVPSFLPI
                     RRSHVLPFAHAPPSFLV"
     gene            2430..2651
                     /locus_tag="VFD73_05345"
     CDS             2430..2651
                     /locus_tag="VFD73_05345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73443.1"
                     /translation="MKNTTRVPHVALGYVIGCVAALLSVAAPAWAQRDSTIKPDSTKI
                     RQLEAITVMAERPKSAAPPVTTIEVPATG"
     gene            2660..>3151
                     /locus_tag="VFD73_05350"
     CDS             2660..>3151
                     /locus_tag="VFD73_05350"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Plug domain-containing protein"
                     /protein_id="HZI73444.1"
                     /translation="MATDPYDLLRTSGIEVHQQGQGPGFASDAVIRGFSSDHSSDVLL
                     VYDGVPINLPVHGHVEGYSDWSILSPAAMSSLRVITGPASPLYGDFSLAGVVEVFSPA
                     DATGVSGSVSGSSQGDAGGWVRGGSQTERGGFFLAGDGQRQQGWRDNSAYWLGNGILR
                     GWRQ"
BASE COUNT          496 a         1055 c         1048 g          552 t
ORIGIN      
        1 ctgtttgaac ccgtcagcat cggccgagta gaccagctgc tttccgtcgg gagaccaggc
       61 cggccattcc tcgacaccgg cggcgtcggt aatgggcgag agcttccgct catgccccgg
      121 tgtgaccgat ccggtggcag cagtgcggct tccgatccgg tggccgagca ggatggcggt
      181 gagcaggacg actccggcgg cgagcgcgat gcccgcacgg cgaacgccgg aatggggctg
      241 caccgtcgcc ggctcggtca gcgcgcgcac gaactcggca gcggtctgga accggtcggc
      301 cggttgcttc gccagcgctc ggcccagcac cggcgacaga ccgcgcggga cccgtgacgc
      361 tgcaagggaa gggctctgtc ccagctgctt agcgatgatg ccctgggcgg tcggaccagt
      421 gaagggaggc tgtccggcca gcatctcgta gagcacgcag cccagagagt agatgtcgct
      481 tcggccatcg atgtcggatt ctcccgccgc ctgctccggg ctcatgtaac tgggcgtccc
      541 gatgatcatc ccggtggcag tgaggtgcgg cgtgggtccc agcgacgcgc gcgcgatgcc
      601 aaagtctgcg acgagggtgt tcccatcccg ggtgagcagg atgttttccg gtttgatgtc
      661 gcggtggacc acaccgtgat cgtgggcgta ttgcagcgcc tggcccgctt cgcgggcgat
      721 acgaagcgcc tctgagcggg ggagtgcccc ctctcgccgg agccgctcgc ggagactctc
      781 cccctccacg tacggcatgg tgaaccagag ccggccgtcg gtctctccgg agtcgaacac
      841 ggtgaggatg tggggatgct gaagccgggc cgccaggcga atctcctgga ggaatcgctc
      901 ggtgccgaag ctgccggaaa gctcgggccg gatcaccttc agcgcgacgt agcggtcgtg
      961 cttcaggtcc tgcgccagat acaccgtcgc cataccgccc tggcccaact ggcgctcgag
     1021 caggtatcgc tcgcggagtg catcggagaa cggcgacggg atcgcgctca cgaactcgct
     1081 ggggctggag aagcactcaa tttgccggaa tgcatccgac cggggaagct ggtaccttga
     1141 gggatgatca ggccttaccg cgttccgctc gtcctggcga ccctcctcgg cggttgcacg
     1201 ccaaccacaa acctgctgaa cccagcaacc ccgagcttct ccggtgcgta tgcggtggca
     1261 aggccggaca cgagcggcgc ccggcagctc cgcatcgtca ccttcaatgt gaagctttcc
     1321 caggacatcc caggcgccat ccgggtgctc agttccgaca gcctccgggg agcggacatt
     1381 ctcgcactgg aggagatgga cgatgtgggg gtcgagcgga tcgcccgtgc gctgaagctg
     1441 aattacgtct actatcccgg catcatttac cgcaacggca actacttcgg accggcgctc
     1501 ctctcccgct ggcctatcga gcagagctgg aagctgttgc tgccgcacga gggattgatc
     1561 cggcaccagc gccgcacggc caccgccgcg gtgctgcgga ttcgagggca gcgggtgctg
     1621 gcctacgccg tccatctcga gacccagctc aagatctcgg aacagggccg cagggatcag
     1681 gtgcaggcga ttctggatga tgcgaagggc ttctccggcc ccaccgtgct cgccggcgac
     1741 ttcaatagtc aggggatcgg cccctacctg gtgcagcggg gcttcacctg ggtgacctct
     1801 cgcgtcggcc ccagcatctc ggtgttctcc tgggatcaca tctttgtgcg gaacctgtct
     1861 ccgacccgct ctcccggcgc cggcctggtg aaagacgtgc atggcgcgag cgatcatcgc
     1921 ccggtctggg cagtcgtcac cgagcgggca tgacgcgaca ttctccgccg tgagcaactg
     1981 gttccgcagt ctggtcggtg cggtcctcac cgcgtcgttg gcaatgagcg ccgtcacctg
     2041 gggctcgatg cccgggtgta cgtccgctca ggcatcggac gcacctgccg ggcaccagca
     2101 cggaatgccg gcgcacccag gtggccccgc ccaccaggcg gctacggtgc agtgcttcgt
     2161 ccatctctgc tgcctgcagc tggtgtcgct cccatcggga acccgcgcgc tggagcgctc
     2221 ggatggatcc ggcaacgcgt ccgttcctcc gcccgtcccg tcatttcttc cgatccgcag
     2281 gtcccacgtc cttcccttcg cgcacgcccc accctcgttc ctcgtctagc ctgaccgcag
     2341 cttgctctgg gccgtagccc aggcattacc agcagcaaat catcgccggc cgctcatccg
     2401 ggcgaaccgg tcttgacgag gggtaaagag tgaagaacac aacgcgtgtt ccgcacgtcg
     2461 ctcttgggta tgtcattggt tgtgtggccg cactgctcag cgtggccgcg ccggcctggg
     2521 cccagcgcga ttcaacgata aagccggata gcaccaagat tcggcagctc gaggcgatca
     2581 cggtgatggc cgagcggccc aagtccgccg ctcctccggt gacaaccatc gaggtgccgg
     2641 ccactggctg aggcgaacct tggccacaga cccgtacgat ctgctccgga ccagcggcat
     2701 cgaagttcac cagcagggcc aggggcccgg tttcgcttcg gacgcggtga tccggggatt
     2761 ctcgtccgac cactcgtccg atgtgctcct ggtctatgac ggcgtgccta tcaacctgcc
     2821 ggtccacgga catgtggagg gctactctga ctggagcatc ctctcgcctg ccgcgatgag
     2881 ctcgcttcgg gtgatcaccg gcccggccag tccgctctac ggcgacttct ccctcgccgg
     2941 cgtggtggag gtgttcagtc ccgcagatgc gaccggcgtc tccggcagcg tctcgggctc
     3001 gagccagggc gatgccggcg gctgggtccg gggaggctcg cagaccgagc ggggaggctt
     3061 cttcctggcc ggcgatgggc agcgtcaaca gggctggcgc gacaactctg cgtactggct
     3121 gggcaacggg atcctccgcg ggtggcggca g
//
LOCUS       DASRPQ010000450         4345 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2872871, whole genome shotgun sequence.
ACCESSION   DASRPQ010000450 DASRPQ010000000
VERSION     DASRPQ010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4345
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2872871"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..812)
                     /locus_tag="VFD73_05355"
     CDS             complement(<1..812)
                     /locus_tag="VFD73_05355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73445.1"
                     /translation="MRWFLRGAAAAVALAGVYSPAVRSQAVAPQSRFTNLRDSLSAVS
                     DSAALRQLLEHAARSDLLRRGLIALRLGEMRADPDFSQALSIFQDASKQAGDHPETWY
                     GLGLAEAARSEWEMRDRKRLGSRVGIGALERAAADNGRALAADPRFLPAALALARIEL
                     TLLDTTRLKRARDVLRRTVAASFPAPPELLLAWGRVERAAGTLDSAEIAFERYLMTGG
                     RRALGLLELARTRLALGRPDGDEPYYEGAALDDPEAEAGYRADLALIAPDSIL"
     gene            complement(834..1286)
                     /locus_tag="VFD73_05360"
     CDS             complement(834..1286)
                     /locus_tag="VFD73_05360"
                     /inference="COORDINATES: protein motif:HMM:NF012579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HZI73446.1"
                     /translation="MQLKDFFTPDALTFNLRGGSKDEVLAELVGLLHMDERSTGTLLR
                     IIQRRENLGSTGIGRGIAIPHCRSLVVNRLHLAFGRRSEGIEYQAIDGKPVCHFFLIV
                     APPLEISNQYLPVLGKIAQFAKEPDVPDRLNGLQTPDDFWRLLEEKGV"
     gene            1383..2366
                     /gene="dusB"
                     /locus_tag="VFD73_05365"
     CDS             1383..2366
                     /gene="dusB"
                     /locus_tag="VFD73_05365"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HZI73447.1"
                     /translation="MQLPYPSGHSFPLMLAPMAGVSEAPFRQICRQMGADVVLSEFLS
                     SEAIRRRIRTTLEGAEFEEVERPIGIQIYGSDPNAMAEAAGLITEHYSPEFIDINFGC
                     PVKKVVQRNGGSGCLRDLTLVERIIRAVIGATHLPVTVKTRSGWSDETRDPVSIALRM
                     QDAGARAFTLHARTRTQMFSGKANWDEIAKVVEALDIPVIGNGDIESGDDIVRMRDHT
                     GCAGVMVGRGAFGNPWLFRDGRALLSGHAAPSPPSAAERFTVALQHAKLAIRLQGDTR
                     RTVLEFRKHLGWYTRGLHGSSALRQRLFQIESVGEAEAIFLEYLEPVAQVA"
     gene            2363..3118
                     /gene="larB"
                     /locus_tag="VFD73_05370"
     CDS             2363..3118
                     /gene="larB"
                     /locus_tag="VFD73_05370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018281842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarB"
                     /protein_id="HZI73448.1"
                     /translation="MTPEQLEALLTEVAAGRLLPRAAVERLRHLPFEDLSFARVDHHR
                     ALRLGHPEVVFCQGKTPEQVVAICERLEAASGGFLGTRASAEVAQLLQSRFPDLIWNS
                     LARTVHLPAPSRGTSPRKTGTILVVSAGTSDLPVAEEAAVVGEAFGHPVERLVDVGVA
                     GLHRLLASADQLRQARVVIVVAGMEGALPSVVGGLVGTPVIAVPTSVGYGASFGGLAA
                     LLGMLNSCASGVTVVNIDNGFGAAVAASRICDA"
     gene            3115..4050
                     /locus_tag="VFD73_05375"
     CDS             3115..4050
                     /locus_tag="VFD73_05375"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CorA family divalent cation transporter"
                     /protein_id="HZI73449.1"
                     /translation="MTVQIVLTGAEPPFTWVDVVNPTPSELVEVANQYNLHPMSVEDS
                     LEPEHLPKYERIGATTFIIVRAMDTTAAPDCSSVHEMTRKVAIFYGQEFLITIHRSEQ
                     PFLTSIINEYVSASPPHGIKERRKGYLPRLLIDLINGAITTFEKPLGAAETAIDAFEA
                     TVFGEHDFTSLLRRIYLEKRRVTQMRRMLSHTLDAVQKLVPASEPTAPLYQDLRENAE
                     SMHFYADELVDDVNNLLSVQLALASHRTNEVVRVLTVFSVFFLPLTFIVGVYGMNFQF
                     MPELRERWGYPSVLAGMAVVTLAIYVWFRRRGWLR"
     gene            4053..>4345
                     /locus_tag="VFD73_05380"
     CDS             4053..>4345
                     /locus_tag="VFD73_05380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73450.1"
                     /translation="MEALALIVVGVAGVLVGWLAARRRRGRQLGSAVAPHLLPDPALE
                     WLRRAHRALGVWITELDPSEEGPRAERILEPERLSVAQIVAVDRRLERARDQE"
BASE COUNT          758 a         1381 c         1398 g          808 t
ORIGIN      
        1 agaatcgagt ccggggcgat gagcgccaga tcggcgcgat agccggcctc cgcttcaggg
       61 tcgtccagcg ccgctccctc gtagtagggc tcgtctccgt ccgggcgccc cagcgccagt
      121 cgcgtacggg ctaactccag aagtcccagc gcccgcctgc cgccagtcat caggtaccgt
      181 tcgaaggcga tctcggctga atccagggtg ccagcggccc gttcaacccg gccccaggcg
      241 aggaggagct ccggcggcgc gggaaaagat gctgcgaccg tccggcgaag cacatcccgt
      301 gctcgcttca gccgcgttgt gtccagcagc gtcagctcga tacgggccaa ggccagtgcg
      361 gccggaagaa atcgcgggtc ggcggccagg gctcggccat tgtccgccgc cgcgcgttcc
      421 aacgcgccga tgccgacccg gctgccaaga cgctttcggt ctcgcatctc ccactcactc
      481 cgggctgctt cggccagccc cagtccatac catgtctcgg ggtggtcgcc tgcctgcttg
      541 gatgcgtcct ggaagatgga gagagcctgg ctgaaatcgg gatccgcgcg catctcgccc
      601 agccggagcg caatgaggcc gcgtcgcaag agatcgctcc gggcggcgtg ctccagcagt
      661 tgccgcaacg cggcgctgtc ggaaaccgcc gagagggagt cccgaaggtt cgtgaatcga
      721 gactgcggcg caaccgcttg gcttctgact gctggggaat agacaccggc gagcgctact
      781 gctgctgcgg cgccgcgcag gaaccatctc actgaatcac ctcgggcgtt gagctagacg
      841 cccttctcct ccagcagccg ccagaagtca tcgggcgttt gcagcccgtt gagacggtcg
      901 ggaacgtcag gctccttggc aaactgcgcg atttttccga ggaccggaag atactggttg
      961 gagatttcca ggggtggggc cacaatcaga aagaaatggc agaccggctt gccatcgatg
     1021 gcctggtact cgatgccctc acttctgcgc ccaaaggcca gatgcagccg gttgaccacc
     1081 agggatcggc agtgcggaat ggcaatccct ctgccaatgc cggtcgagcc gagattttct
     1141 cgccgctgaa tgatgcgaag cagcgtgccg gtcgatcgct catccatgtg cagcaatcca
     1201 accagctcgg ccagcacctc atccttggat ccaccccgca ggttgaaggt gagtgcgtcg
     1261 ggggtgaaga agtccttgag ctgcatggcg gggcaaccta attcgcgttg ctaagagtgt
     1321 caaagtcctg tgaaacagct tgattggttg ccccggcttc tgcagccaag tattttctcg
     1381 gcatgcagtt gccatatccc tcgggacatt ccttcccgct catgctggcg cccatggcgg
     1441 gcgtctccga agcgccgttc cggcaaattt gccggcagat gggtgccgat gtggtgctct
     1501 ccgaattcct ctcctcggag gcaatccggc ggcgcattcg gaccacgctg gagggcgccg
     1561 agttcgaaga ggtggagcgt cccattggca tccagatcta tggctcggat ccgaacgcca
     1621 tggccgaagc cgccggtctc attaccgagc attactcgcc cgagttcatc gacatcaact
     1681 tcggatgtcc ggtcaagaaa gtggtgcagc ggaacggagg atcgggctgc ctccgggatc
     1741 tcaccctggt cgagcgaatc attcgcgcgg tcatcggcgc cactcacctg ccggtgacag
     1801 tgaagacccg cagcgggtgg agcgatgaaa cccgggatcc ggtgtctatt gccctgcgga
     1861 tgcaagatgc cggcgcgcgg gcgttcaccc ttcatgcccg cacccgtact cagatgtttt
     1921 cgggcaaggc gaactgggat gagatcgcca aggtagtgga ggcgctggat attccggtca
     1981 tcggtaatgg agacatcgag tctggtgacg acatcgtccg catgcgcgac cacaccgggt
     2041 gcgccggcgt catggttggc cgcggcgcgt tcggcaatcc atggctcttt cgggatggcc
     2101 gggcactcct gtcgggtcat gcggcgccat cgcctccttc agcggccgaa cggtttactg
     2161 tcgctctgca acacgccaaa ctcgcaattc ggctgcaagg cgacacccgc cggactgttc
     2221 tggagttccg gaagcaccta gggtggtaca cccgggggct gcacggctcc agtgccctac
     2281 gccagcgcct attccagatc gagtcggtcg gggaagcaga agccatcttc ctcgagtatc
     2341 tcgagccggt cgcgcaggtg gcgtgacccc ggagcagctc gaagcgctcc tcaccgaggt
     2401 ggctgcgggc cgcctactcc cccgcgccgc agttgaacga ttgcggcatc tccctttcga
     2461 agacctctcg ttcgcacggg tagaccacca ccgcgcgctg cgattgggcc acccggaagt
     2521 cgtcttctgc cagggaaaga ctcccgaaca ggtggtcgcg atctgtgagc ggctggaggc
     2581 agcaagcggt ggttttctgg gaactcgagc cagcgctgaa gtggcccagc tgctccagtc
     2641 acgcttcccg gatctgatct ggaattcgct ggcccgaacc gttcatctgc ctgcgccctc
     2701 gcgaggcacg tctccccgaa aaaccggaac gattctggtg gtctcggcgg gcaccagtga
     2761 tcttccggtc gccgaagaag ctgccgtcgt gggagaggca tttggtcatc cggtagagcg
     2821 cctggtcgat gtcggcgtgg ctgggctgca ccggctgctc gcctccgccg atcagctgcg
     2881 ccaggccaga gtggtcatcg tcgttgccgg aatggagggc gctctgccga gcgtggtcgg
     2941 tggcttggtg ggcactccgg tcatcgcggt accgaccagt gttggctatg gcgcctcgtt
     3001 cggtgggctg gcggccctgt tgggaatgct gaactcctgc gcatcggggg tgacggtcgt
     3061 gaacatcgac aacggtttcg gcgcggcggt agcggccagt cggatctgcg acgcatgacc
     3121 gtccagatcg tactcaccgg cgccgagccg ccattcacct gggtcgatgt ggtgaacccc
     3181 accccgagcg agctggtcga ggtggccaac cagtacaacc tgcacccgat gtcggtggag
     3241 gactcgctcg agccggagca ccttcccaag tacgagcgca tcggagcgac gacgttcatc
     3301 atcgttcggg ccatggatac taccgctgct cccgactgct cttcggtcca cgagatgacc
     3361 cgcaaggtgg ccatcttcta cggtcaggag ttcctcatca cgatccaccg gagcgagcag
     3421 cccttcctga cctcgattat caacgaatac gtgagtgcct cgccgccgca cggcatcaaa
     3481 gagcggcgca agggatatct gccccggctc ctgatcgact tgatcaatgg ggcgattacc
     3541 accttcgaaa agccgctggg ggcggcggaa acagcaatcg acgccttcga ggccaccgtg
     3601 tttggcgagc acgatttcac ctcactgctc cgccgtatct acctggaaaa gcgccgagtc
     3661 acccagatgc ggcgcatgct gtcgcacaca ctcgacgcag tccagaagct ggtgcctgcc
     3721 tccgagccca cggcacccct gtaccaggac ctgagggaaa acgccgagag catgcacttc
     3781 tacgccgatg agctggtcga tgacgtcaac aacctgctga gtgttcagct tgccctggcc
     3841 tcgcatcgca ccaatgaagt ggtgcgggtg ctgacagtat tctccgtgtt cttcctgccg
     3901 ctgaccttca ttgtcggggt gtacgggatg aacttccagt tcatgccgga gctgcgcgag
     3961 cgctggggct acccttcggt gctcgccgga atggcggtgg tgacgctggc gatttacgtg
     4021 tggtttcgtc gccgaggatg gttgcgatag gcatggaggc actcgccctg atcgtggtcg
     4081 gcgtggccgg tgtactggtc ggctggctcg cggcgcggcg acggcgggga cgccagcttg
     4141 gttcagcggt tgccccacac ctgctccccg atccggcact ggaatggttg cgacgggccc
     4201 accgcgcgct cggcgtctgg atcaccgagc tcgatcccag cgaagagggc cctcgtgcgg
     4261 agcgcatact cgaaccggag cggctgtcgg tagcgcaaat cgtggccgtg gaccggcgac
     4321 tcgagcgcgc acgggaccag gaaca
//
LOCUS       DASRPQ010000451         1114 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2571865, whole genome shotgun sequence.
ACCESSION   DASRPQ010000451 DASRPQ010000000
VERSION     DASRPQ010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2571865"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            170..430
                     /locus_tag="VFD73_05385"
     CDS             170..430
                     /locus_tag="VFD73_05385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73451.1"
                     /translation="MALALLYAGACRTGFVILTAKPIAGHAQRASGGSAGQDDPVAAG
                     ALDVDPGRETGTSPGSSACPRTPRQTAMPENAAAEPTATAQQ"
BASE COUNT          191 a          354 c          364 g          205 t
ORIGIN      
        1 ccgcgactgc cactcttact cccggttcgt gctccgtgcc ggcgtggatc tcagacatca
       61 aagagcctcc cgtaccgctg gcaagggctc aagagttgaa cgcagcgacg ttgagtacgg
      121 aaactagggg acgctctgtc atgccgccga caggatcttc caggccgcaa tggcactggc
      181 acttctgtac gcaggtgcat gccggacggg gttcgtcatc ctgacggcga agccgatcgc
      241 cggtcacgcg caaagggcga gcggcgggag cgcagggcag gacgatccag ttgccgctgg
      301 cgccctggac gtggatccgg gccgagagac aggcaccagc cctggatcat cggcgtgccc
      361 tcgcaccccc cggcagacgg ccatgccgga gaacgccgcg gcagagccga ccgccactgc
      421 gcagcagtga acggctgccc gaaacgtccg tctccctacc cggcatcacg ctgagcgaca
      481 atggaggtca aggagaacgc gcacactgtc gttatgcacg gaaacgccct cttcgatctg
      541 gctcgttgga ggcgcgccta acaggatctt ctgttgctcg ctatccccgg cgaattcgcg
      601 gcgaagttta gcggcctgga actgtgtcgc ctggtcacga gcattgtgag actgatctgc
      661 ggcagatctt tgcggctatc ggcaggagac tcgatgctat ggcagggccg ggcacggtgc
      721 tgtggtcatt ggtctccggc agcgccagat gtaggtcgcg ctggtcggcc gcgtggacgt
      781 ggtggcacat gtgggtgagg cagcccggtg cggcgacgcg cccgtgcggg acggcttcga
      841 tccggccgcg cggtcatacc tcggtcatac ctggcgtctg tccgcggcgc ggccatgctg
      901 accgcgaccg gtcaggatgg gcgtccagcc gaagcactgg ccctataagg cgcggagcag
      961 atcgtaggtg cagtccgggc cgaccgccat cttcacggcc tgttcctttg aattccggag
     1021 tgtaatactt tcctttcgcc atttcccccc gtcccctttc agggaagatc tttgatctcg
     1081 ctgtccggga actcgggggc acctcaacta ttca
//
LOCUS       DASRPQ010000452         1549 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1940765, whole genome shotgun sequence.
ACCESSION   DASRPQ010000452 DASRPQ010000000
VERSION     DASRPQ010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1549
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1940765"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1151
                     /locus_tag="VFD73_05390"
     CDS             <1..1151
                     /locus_tag="VFD73_05390"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZI73452.1"
                     /translation="TGGSATEDLTLDLRDLLAQGVTTVRDMGGNPAELLARVHATTAT
                     PRVYAMQLVAGQRFFFNGGFQGIRTSRGIVFRQPPAMTMQALGWTPILFRREDDPDSV
                     VAVAQQAGAMGLKLYAQLDLVSVKKLVAAAHRAGMPVWGHAWVQPASALEQAAAGQDG
                     IVHAAGLAGELFTPEERDTLVKDGDLQLATAEVATVGSAHDPRIAAALDSMAKMGTFF
                     EPTLDATRHSLAYFDSKRQHIPSEQEEYVRAGSGFGMEVTREAVRRGVRISAGSDHVA
                     YGPVSERASLFGELRLLVDSIALSPTAALLAATRDAARAIGGEPARRLGTIEAGRYAD
                     LVLLSKNPLLDIDNLDSVEWIMKGGQIWRPGQLRSGIAMVTAGQRGGE"
     gene            complement(1165..>1549)
                     /locus_tag="VFD73_05395"
     CDS             complement(1165..>1549)
                     /locus_tag="VFD73_05395"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HZI73453.1"
                     /translation="QQHDGILVDARPPEQYSGQAGAQIRRGHIPGAISHYWQDDLTQE
                     GFGHVWKAAPELRSSYAAQGITPDKSIIVYCNSTTEASHVHFTLRYLLGYPRVRIYTG
                     SWTEWAARLDLPIEAGQRGSGAAGR"
BASE COUNT          257 a          491 c          525 g          276 t
ORIGIN      
        1 tgaccggtgg gagcgccacc gaagatctca cgctcgacct gcgggacctc ctggcacaag
       61 gagtcaccac cgttcgagac atgggtggca accctgccga gctgctggcc cgggtccatg
      121 ccacaacggc aaccccgcga gtctacgcca tgcagctggt ggcggggcag cgcttcttct
      181 tcaatggtgg gttccagggc atcagaacca gccgcggcat cgtattccgt cagcctcccg
      241 cgatgaccat gcaggcgctg ggctggacac ccattctgtt tcggcgcgaa gacgatcctg
      301 attcggtggt ggcggtcgcc cagcaggcgg gcgccatggg cctcaaactg tacgcgcaac
      361 tcgatctcgt ttccgtgaag aagctggtgg cggcggccca ccgggctggt atgccggtct
      421 ggggacacgc ctgggttcag ccggccagcg cgctcgagca ggccgcggcc ggacaggacg
      481 gcatcgtgca cgccgctgga ctggccggcg agctgttcac gccggaggag agggatacgc
      541 tggtgaagga tggcgatctc cagctcgcca cggcggaagt ggcaaccgtt ggatcggcgc
      601 acgatccgcg catcgcggcg gccctcgatt cgatggccaa gatgggaacg ttctttgagc
      661 ctacgctgga tgccacccgc cacagcctgg cctacttcga ctccaagcgg cagcacattc
      721 cttcggagca ggaagagtac gtgcgcgccg gttcggggtt cgggatggag gtcacccggg
      781 aagcggtgcg gcgcggagtc cggatcagcg ccggaagcga tcacgtcgcc tatggtccgg
      841 tgagtgagcg ggcgtcgctc tttggcgagc tccgccttct ggtggattcc atcgctctgt
      901 cgcctacggc tgccctgctc gcagcgacac gcgatgcggc ccgggcaatc ggcggggaac
      961 cggcgcggcg gctaggaacg atcgaggcgg gccgctacgc tgacctggtc ctgctcagca
     1021 agaacccact cctcgacatc gacaacctcg attcggtcga gtggatcatg aagggtggac
     1081 agatctggag gccgggacag ttgagaagcg ggattgcgat ggtgacagcg gggcagcggg
     1141 gcggcgagtg atttttcttg ttcgttaccg ccccgctgcc ccgctgcccc gctgccccgc
     1201 ctcgatcggc agatcgagcc gcgccgccca ctccgtccag gacccggtgt agatccgcac
     1261 tcggggatag cccaggagat acctcaatgt gaagtggacg tggctcgctt ccgtggtgct
     1321 gttacagtac acgatgatgc tcttgtctgg cgtgattccc tgcgcagcat aggagctccg
     1381 aagctcggga gccgctttcc agacatggcc aaagccctcc tgcgtcaagt cgtcctgcca
     1441 gtagtgactg atcgctcccg gaatatgtcc ccggcggatc tgcgcccctg cttgcccgga
     1501 atactgctcg ggtggccgag catcgaccag gatgccgtcg tgttgctgg
//
LOCUS       DASRPQ010000453         1100 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2572081, whole genome shotgun sequence.
ACCESSION   DASRPQ010000453 DASRPQ010000000
VERSION     DASRPQ010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2572081"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..293)
                     /locus_tag="VFD73_05400"
     CDS             complement(<1..293)
                     /locus_tag="VFD73_05400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73454.1"
                     /translation="MTDGPPPSRLPAPDSSGLAGTATADNDHAPHQDEGEDAADRLNP
                     HVAAAVVDIFVYVVVLNMFVEYLPGVLSETFTLSLVTAVLLKGVLEIVVAVKNR"
     gene            complement(286..663)
                     /locus_tag="VFD73_05405"
     CDS             complement(286..663)
                     /locus_tag="VFD73_05405"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HZI73455.1"
                     /translation="MPLAEVDSQMERFQETLRRLAMIDETFIQDQAGLRLELAEASAL
                     DSRTAALVQVGVSAAIGSPAVSLEWSAARALAAGASEDQIADVLLAIAPVAGLDRVVA
                     AAPHIGIALGYDVAVALVEPDDD"
BASE COUNT          187 a          365 c          342 g          206 t
ORIGIN      
        1 cggttcttta ctgccacgac aatctccaga acgcccttca gcaggactgc cgtgaccaga
       61 gagagggtaa aagtctcgct gagaaccccg ggaaggtact ccacgaacat gttcaggacg
      121 accacgtaga cgaagatgtc aaccaccgcc gctgcgacgt gcggattcag ccggtctgca
      181 gcgtcttcgc cttcgtcctg atgaggcgca tggtcattgt cggcagtcgc cgtcccagcc
      241 aggccgctgg aatccggtgc ggggagccga ctgggtggtg gcccgtcagt catcgtccgg
      301 ttctaccagc gcgactgcga cgtcataccc tagtgcgatt cctatgtggg gagcagcggc
      361 cacgacccgg tcgagcccgg ccaccggggc gatcgccagc aagacgtcgg cgatctgatc
      421 ttcacttgcg cccgccgcga gcgcccgggc ggcgctccat tccaggctga ccgctggcga
      481 cccgatggcc gccgacaccc ccacctgaac cagcgccgct gtcctggaat ccagggccga
      541 ggcctccgct agctccagcc tcagcccggc ctggtcttgg atgaacgttt cgtcgatcat
      601 ggccagcctg cgcaatgtct cctgaaatct ctccatctgg ctatccacct ccgccagcgg
      661 catcgcacca ttccatctcg cggccgggcg gcttacatca ccctgatgac gtgaagacgt
      721 ccgacctacg ggaaatccca gcttgctgca tggcgatcgc ctggtttcgt gacggggaat
      781 ccagcttgcg gcagatcggc agaacttggg acttgatgct ggtgctagcg gccaggcttt
      841 cacgctctcg ggtggatgcc gcccgtgagc ctatgcggtg ggatcgatag cggtaggggt
      901 ccgcatatgt cgtaagcagg gacgttgccg tgcagtcagc gccttctcag tcccgttggt
      961 acatgcgtgc cacgagacgc gcaaccgatg tcccgggcgg catagtctgc ctgcggctta
     1021 cggcgagctg tgcgctgatg ccgcagacgg gcactggtgt cgctgcagcg ccgactggcc
     1081 gatctgacca tccggctccg
//
LOCUS       DASRPQ010000454         1158 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_992943, whole genome shotgun sequence.
ACCESSION   DASRPQ010000454 DASRPQ010000000
VERSION     DASRPQ010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_992943"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..611)
                     /locus_tag="VFD73_05410"
     CDS             complement(<1..611)
                     /locus_tag="VFD73_05410"
                     /inference="COORDINATES: protein motif:HMM:NF021254.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exosortase/archaeosortase family protein"
                     /protein_id="HZI73456.1"
                     /translation="MDTVSSAGPAPAKSPAAAFPWVPVAWFAVLLCIPYLGILTGMVR
                     EWFQLDDMGHGIFVPLLSGYIVWANRETIFDSENPPRPNWWGLLLVVWAFFQAVLGIL
                     GADYFIARTAFLLALIGLIVTVGGLETVRKLAFPLFLLLFMIRIPQFVYSQITFPLQI
                     LASQLATATLSVLGVPVMREGNVLELANQTLSVVEACSGIRSL"
     gene            789..>1158
                     /locus_tag="VFD73_05415"
     CDS             789..>1158
                     /locus_tag="VFD73_05415"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HZI73457.1"
                     /translation="MVVVNWNRKELLRACLRSLQGEAQAQVEFETIVVDNGSSDGSAE
                     LAEEEFGARVIRNAENRGFCAANNQGIAIARGEFIALLNNDAEAEPGWLAALVRACSQ
                     APDVGMAASKVLVWEDPRRID"
BASE COUNT          245 a          308 c          430 g          175 t
ORIGIN      
        1 atcagcgagc ggatgccgct gcaggcctcc acgaccgaga gggtctgatt ggcgagctcg
       61 agcacattgc cttcgcgcat caccgggacg ccgaggacgg agagtgtggc ggtggcgagc
      121 tggctggcga gaatttgcag cggaaacgtg atctggctgt agacgaactg cgggatgcgg
      181 atcatgaaca gcagcagaaa gagcggaaac gccagcttgc gaaccgtttc cagaccgccg
      241 acggtgacga tcaggccgat caaagccagc aggaaggcag tgcgggcgat gaaatagtcc
      301 gcgccgagaa tgccgagcac cgcctggaag aaggcccaga cgaccaggag cagcccccac
      361 cagttcgggc gtggggggtt ctccgagtcg aagatggttt cccgattggc ccagacgatg
      421 tagccggaga ggaggggaac gaagatgccg tggcccatgt cgtcgagctg aaaccactcg
      481 cggaccatgc ccgtgagaat gccgagatag ggaatgcaga ggaggacggc gaaccacgct
      541 acggggaccc aggggaacgc cgctgcagga gacttcgcgg gagctggtcc ggcagatgac
      601 acggtatcca ttatggtcta cagcgaatag tcaacatcct gaggaggcct gcggctgctc
      661 cacgccagtc taacatacac attttgcgct acggcacaca aggagctcgc ctggcggcgg
      721 caggagtgcc ggcgcggcag gctcgagtgc ctgcgccaca ggactgctag cataatcggt
      781 tgatatcggt ggtggtggtc aattggaacc ggaaggaact gctgcgcgcc tgcctgcggt
      841 cgctccaggg ggaggcgcag gcgcaggtcg agttcgagac tatcgtggtg gacaatggat
      901 cgagcgacgg gtcggccgaa ctggccgaag aagagtttgg cgcgcgggtg atccggaacg
      961 ccgagaaccg cgggttttgc gcggcgaaca accaggggat cgcgatcgcg cgtggggagt
     1021 ttatcgcgct gctcaataac gatgcggagg cggagccggg gtggctggcg gccctggttc
     1081 gcgcgtgttc gcaggcgccg gacgtgggaa tggcggcgag taaggtgctg gtctgggagg
     1141 atccgcggcg catcgaca
//
LOCUS       DASRPQ010000455         1158 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3195746, whole genome shotgun sequence.
ACCESSION   DASRPQ010000455 DASRPQ010000000
VERSION     DASRPQ010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3195746"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..358)
                     /locus_tag="VFD73_05420"
     CDS             complement(<1..358)
                     /locus_tag="VFD73_05420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73458.1"
                     /translation="MRLRSFNELLQSPRALKALVAGGSALGLLLLGLLAMPALVRGKL
                     ERAARERGLEVTVGAVQLGWSSVWARDVRVTSPGDHAELRLDAVNVGVFSGAIRAVGG
                     ALRGSGDPEPLLTKLRG"
     gene            complement(479..595)
                     /gene="rrf"
                     /locus_tag="VFD73_05425"
     rRNA            complement(479..595)
                     /gene="rrf"
                     /locus_tag="VFD73_05425"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(735..>1158)
                     /locus_tag="VFD73_05430"
     rRNA            complement(735..>1158)
                     /locus_tag="VFD73_05430"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          237 a          394 c          317 g          210 t
ORIGIN      
        1 tcccacgcag cttggtgagc aacggctccg gatcaccgct gccacgcaag gcgccaccga
       61 ccgcccggat cgcgccggag aacaccccga cattcaccgc gtccagccga agctctgcgt
      121 ggtcgccagg cgacgtcacc cggacgtcgc gggcccacac gctgctccag ccaagctgca
      181 ccgcgccaac cgtgacttct agcccgcgct cacgagccgc ccgctccagc ttgccgcgca
      241 ccagcgccgg catcgccagc aagccgagca gcagcaaccc gagcgcgcta ccaccagcca
      301 ccagggcctt gagagcccgc ggactctgga ggagctcgtt gaagctacgc aagcgcaaca
      361 ggtgtagtgc caacgctcgc ggggcccaag cccatccgtc ccgccgcgcc aaggcgctgg
      421 gccgaaggac aaaaaagcaa agccccagtg agttaacact ggggctttgg gggaattaac
      481 ccggcaccgt cctactctcc cacacagttg cccgtgcagt accatcggct ccgaagagct
      541 tgacttccga gttcgagatg ggatcgggta tggcctcttc gatataggca ccggaaattt
      601 ttgggcgtcc aaagcagctt tttggtgctg cgctgtttat tggctactgg ggatctcgcc
      661 cgagcttgcg ctcgagatat cgatagatcc cgcccggagt ccgggcacca accagaatgt
      721 ttgccttaga gaatgagatc aagccgcacg gcctattagt actcgttagc tccgcgcctt
      781 gcagcgcttc cacaccgagc ctatcaacct cgtagtcttc gaggggcctt tagtgacttg
      841 cgtcagggat acctagtctt gaggccagct tcccgcttat atgccttcag cggttatctg
      901 ttccgaacat ggctacccgg ctatgccact ggcgtgacaa ccggagcacc agaggttcgt
      961 ccatccaggt cctctcgtac tatggatagc tcctctcaag tatcctgcgc ccacggaaga
     1021 tagggaccaa actgtctcac gacgttttaa acccagctcg cgtaccgctt taattggcga
     1081 acagccaaac ccttgggacc tgctccagcc ccaggatgcg atgagccgac atcgaggtgc
     1141 caaaccgcgc cgccgatg
//
LOCUS       DASRPQ010000456         4532 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1941164, whole genome shotgun sequence.
ACCESSION   DASRPQ010000456 DASRPQ010000000
VERSION     DASRPQ010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4532
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1941164"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..859)
                     /locus_tag="VFD73_05435"
     CDS             complement(<1..859)
                     /locus_tag="VFD73_05435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73459.1"
                     /translation="MRVRRRLFTGFLLAVAGLAPASAKADPTPAWAIQSIAAPTNFAP
                     GDESGSDRYFAFITNSGGKATDRSPITITDTLPPGVKVKRIILKSPRGETEIGNAPVC
                     EAEESGGVATASCEVTEAVDPPREPALLYPGNQLLFEIRVKTPASASGTLVNRVEVAG
                     GGAEPVSREIENPASEEEAHIGFEEFHAGLVGADGKPARGAASHPYQYVTSFAVNTVP
                     SVKEGDNFIPAEGDLKDVEVALPAGLAGNPTAIGECTPEKFTNVHTGHTKLGQSPIGV
                     NECPVDTAVG"
     gene            complement(856..>4532)
                     /locus_tag="VFD73_05440"
     CDS             complement(856..>4532)
                     /locus_tag="VFD73_05440"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NHL repeat-containing protein"
                     /protein_id="HZI73460.1"
                     /translation="DTQVCATGTGLGKCAKPLGLATDFETGLLYVADSGNNRVDVFKN
                     GGTELGTPSSLGGVSAPNWIAVDNVAASPSHHDIYSTTADFKVKKLNPNGTLIDEFGE
                     QGDGTPEGCQLERANDQVAVGPGGDVYLADSYDKDGNGGGQVFVNRIVKFDDTGNCIG
                     AVPLFESALQVIRDLAVDSTGAIYVTVAGAGGVIRQYTGAGTMVRQFENLETKGLAVD
                     AADHLFAKQGGEKPVEPWGIVFTTEYDSAAAGGAILHRFDYAPGAIVAGGIPESTGLA
                     ALHTPSGDLFASRPSGGSSGAFYSKLPPPGPVLFPEPCQVSENGNTKATLYAEVNPEG
                     KATTVHAEYITEADYEGNGNSFAGPHPASQTPESEPIGPGFEMREATAEAEVEPETEY
                     RCRVVATNADGSTTGEEGSFTSLKPIEIGLSTPTDVGTEEATLNVQADPLGIETSGYF
                     EYVEEATYRKDIEELGPEHGFDHALKAPDPETEEEIDFGAEKGFKLRSQLVKGLAPAT
                     AYRFRLHATNTFFKAKGETGVLGPIAFLRTYGSSTEALPDQRAFELVSPGEKNSAEVV
                     GPMNTRGLFLNVPAEIKAASPNGESLTYTSWTSFGDAEGAPATSQYLSKRTATGWSTE
                     NVSPGGFQPEVVTPPYLGYSPDLGFGAFQASRTSLAPGCPQSRENLYLHEADGQTRCL
                     TPEAPNASNEFGYAFSYAGASEDGSRAFFRSHASYAGAPTGGFSLYEAHQGQISVASV
                     LPGGEAAPASQETSFGAPSAEPLHPTDLSILRNAISADGTRAIWTYVPGSGPSQLLDR
                     IGGTETIQLDALHGGSSKTGGNGLFWGASKDGSIVYFTDPERLVKGSKAETGKPDLYR
                     YDLNDESLTDLTKGIEAADVQGVLGASEDGSVVYYVARAALTPEAQQNEAAQHAEAGK
                     YNLYRYGAEAEESTFIAQLSGEDADNWNTQPWLITSRVSPDGEHLAFLSSEAKALAGY
                     DNTLAATEGRFAAGTQCRIPDPSIPELGGGPSCPEAFLYDAQSGKLSCASCNPSGSRP
                     LGPALFPFWSRDLEGPRVLSGDGSRLFFESYDRLADQDESAKRDVYEFELPGSGSCTS
                     ESAAYDPASGGCHYLLSSGKSEGDSYLIDASADGRDVFLSTRAQLLGSDSNEQYDAYD
                     AREGGGFPEPPQVPICGSADACKPPATAPPAPGSSPASATLVGAGNPRPKKHRARHHK
                     GHSKKHKAKKKRHEKGRGAR"
BASE COUNT          611 a         1328 c         1636 g          957 t
ORIGIN      
        1 tgcccaccgc ggtgtcgacc gggcattcgt tcactccgat tgggctctga cccagtttcg
       61 tgtggcccgt atgaacgttt gtgaactttt cgggtgtgca ctccccgatc gctgtcgggt
      121 tgcccgccag accagctggc agcgccactt caacgtcttt caggtcgcct tcggcgggga
      181 tgaagttgtc accttctttt acgctcggca ccgtgttgac cgcgaagctc gtcacgtact
      241 ggtatgggtg agaggcagca ccacgtgccg gtttgccgtc ggctccgacc agcccggcgt
      301 ggaattcctc aaagccgatg tgggcttctt cttcgctggc ggggttttcg atttcccggc
      361 ttactggctc cgctccgccg cctgccacct ccacccggtt gaccagagtg cctgaagcgc
      421 tcgctggggt cttcaccctg atttcgaaga gcagctgatt gccggggtaa agcagcgccg
      481 gttcgcgcgg cgggtccacc gcttcggtca cttcgcagct tgcggtcgca accccgccgc
      541 tttcttctgc ttcgcaaacc ggcgcgttgc cgatttccgt ctcacccctg ggagacttca
      601 ggatgatgcg tttgaccttg acgcccgggg gaagcgtgtc tgtgatcgtg atcgggctgc
      661 ggtccgtggc tttcccgccg ctgtttgtga tgaaggcgaa atagcggtcg ctgccgcttt
      721 cgtcgccggg agcgaagttg gtcggggcag cgattgactg gattgcccag gcaggggtgg
      781 ggtccgcctt agccgaggcg ggcgcgagtc ccgcgaccgc gaggagaaat cccgtgaaga
      841 gccgccttct caccctcacc gcgcccccct ccccttctcg tgcctcttct tcttcgcctt
      901 gtgcttcttg gaatgcccct tgtggtgcct tgccctgtgc ttcttgggcc tggggttgcc
      961 cgctcccacc aaggtcgcgc tcgcgggcga ggagccgggg gcgggcgggg cggttgcggg
     1021 cggcttgcag gcatcggcgc tcccgcagat cgggacctgg gggggttcag ggaagcctcc
     1081 cccctccctt gcgtcatagg cgtcgtattg ctcgtttgag tccgagccca gcagctgcgc
     1141 gcgggtcgag aggaagacgt ctcgcccgtc ggcggaggcg tcgatcaggt agctgtcgcc
     1201 ttcgctcttg ccgctggaga gcaggtaatg acagccgcct gaggcagggt cataggcggc
     1261 gctttcgctc gtgcagctac cgcttccggg gagctcgaac tcatagacat cgcgcttggc
     1321 gctttcgtcc tggtcggcga ggcggtcata gctctcaaag aagagacggc tgccgtcgcc
     1381 ggagaggacc ctggggcctt ccaggtcgcg gctccagaaa ggaaagagcg ccgggcccag
     1441 gggccttgag cccgaggggt tgcaagaggc gcagctgagc ttgcccgact gggcgtcata
     1501 gaggaaggcc tccgggcagc tgggacctcc gccgagttcg gggatgctgg gatcggggat
     1561 ccggcactgc gtgccggcgg cgaacctgcc ctcagtggcg gccagggtgt tgtcatagcc
     1621 cgccagcgcc ttggcttcgg aggagaggaa ggcgaggtgc tctccgtcgg ggctgacccg
     1681 ggaggtgatc agccagggct gggtgttcca gttatcggcg tcttcgcctg agagctgggc
     1741 gatgaaggtg ctctcttcgg cttcggcgcc gtagcggtag aggttgtatt tgcccgcttc
     1801 ggcgtgctgg gcggcttcgt tctgttgggc ttcgggggtg agcgcggccc tggcgacgta
     1861 gtagacgact gagccgtcct ctgaggcgcc gagcacgccc tgcacgtcgg cggcttcgat
     1921 ccccttggtc aggtcggtga gcgattcgtc attgaggtca tagcggtaga ggtcgggctt
     1981 gcccgtttct gcttttgagc ctttaaccag cctctcgggg tcggtgaagt agacgatcga
     2041 gccgtccttt gaggctcccc agaagaggcc gttgccgccg gttttgctgc tgccgccgtg
     2101 gagggcgtcg agctggatgg tttcggtgcc gccgatgcgg tcaagcagct ggctcgggcc
     2161 cgagccgggc acgtaggtcc agatcgccct ggtgccgtcg gctgagatcg cgttgcggag
     2221 gatcgagagg tcggttgggt gaagcggttc ggcgctcggc gcgccgaagg aggtctcctg
     2281 ggaggcggga gccgcttcgc cccccggcag cacgctggcg acgctgatct ggccttggtg
     2341 ggcttcatag aggctgaagc cgcccgtggg ggcgcccgcg taggaggcgt gggagcgaaa
     2401 gaaggcgcgc gatccatcct cagaggcgcc ggcgtagctg aaggcatagc cgaactcatt
     2461 ggacgcgttg ggcgcttcgg gggtgaggca gcgggtttgg ccgtcggctt cgtgcaggta
     2521 gaggttttcc ctcgattgcg ggcagccggg ggcaagcgag gtacggctgg cctgaaaggc
     2581 gccgaagccc aggtcggggc tgtagccgag gtaggggggg gtgactactt cgggctgaaa
     2641 gcccccgggg gagacgttct cggtgctcca acccgtggcg gtgcgcttgg agaggtactg
     2701 gctggtggcg ggggcgcctt cggcgtcccc gaaggaggtc caggaggtgt aggtgagcga
     2761 ttccccgttt ggggaggcgg ccttgatctc cgccggcacg tttaggaaga ggcccctggt
     2821 gttcatcggg ccgaccacct cggctgagtt cttctccccc ggggagacga gctcaaaggc
     2881 gcgctggtct ggcagcgctt cggtggatga gccgtaggtg cgaaggaagg cgatcggccc
     2941 caggaccccc gtttcgcctt tggctttgaa gaaggtgttg gtggcgtgca ggcggaagcg
     3001 gtaggcggtg gctggtgcga ggcctttgac cagctgggag cgcagcttga agcctttttc
     3061 cgccccgaag tcgatttctt cttcggtttc tgggtcggga gccttcagcg cgtgatcgaa
     3121 gccgtgttct ggccccagct cttcgatgtc tttgcggtag gtggcttctt cgacgtattc
     3181 gaagtagccg ctggtttcga tccccagggg gtcggcctgg acgtttaggg tcgcttcttc
     3241 tgtgccgacg tcagttgggg tgctgaggcc gatttcgatc ggcttaagcg aggtgaagga
     3301 gccctcttcg cctgtcgtgg agccatcggc gttggttgcc accacccggc agcggtattc
     3361 ggtttccggt tctacttccg cttcggcggt tgcctcgcgc atttcgaagc cagggccgat
     3421 cggttcggac tctggggttt ggcttgccgg gtgggggccg gcgaagctgt tgccgtttcc
     3481 ttcgtagtcc gcctcggtga tgtattcggc gtggacggtg gtggctttgc cctcggggtt
     3541 gacctctgca tagagggtgg ctttggtgtt gccgttttcg gagacctggc aaggctcggg
     3601 gaagaggacc gggcctggcg ggggcagctt ggaatagaag gcgccgctcg agccgcccga
     3661 gggccggctg gcaaagaggt cgccgctggg ggtatggagg gcggccaagc cagtggattc
     3721 ggggatcccg ccggcgacga tcgcgcctgg ggcgtagtcg aagcgatgca ggatcgctcc
     3781 cccggctgcg gcggaatcgt actcggtggt gaagacgatt ccccacggtt cgaccggctt
     3841 ttcgcctccc tgcttggcga agaggtggtc tgcggcgtca accgccagac ccttggtttc
     3901 caggttttcg aactgcctca ccatcgtccc ggcgcctgtg tactggcgga taacgccgcc
     3961 ggcgccagcc accgtcacgt agatggcgcc cgtcgagtcc acagcaaggt cgcggatcac
     4021 ctggagagcg ctttcaaaca gcgggaccgc cccgatgcag ttgccggtgt cgtcaaactt
     4081 aacgattcgg ttgacgaaga cctgcccgcc tccgttgccg tctttgtcgt agctgtcggc
     4141 caggtagacg tcgccgcccg gcccaacggc gacctgatca ttggcccgtt ccaattggca
     4201 gccttccggg gtgccgtcgc cctgttcgcc gaattcgtcg atgagggtcc cgtttggatt
     4261 gagcttcttc accttgaagt cggccgtggt tgagtagatg tcgtggtggg aggggcttgc
     4321 ggcgacgttg tcgacggcga tccagttcgg cgcgctcact ccgccgaggc tggagggcgt
     4381 acccagttcc gtaccgccgt tcttgaagac gtcgacgcgg ttgttgccgc tgtcggcgac
     4441 gtagagcagg ccggtttcga agtcggtggc gagccccagg ggtttggcgc atttgccgag
     4501 gccggtgccg gtggcgcaga cctgggtgtc gg
//
LOCUS       DASRPQ010000457         2285 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1619963, whole genome shotgun sequence.
ACCESSION   DASRPQ010000457 DASRPQ010000000
VERSION     DASRPQ010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1619963"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(111..1136)
                     /locus_tag="VFD73_05445"
     CDS             complement(111..1136)
                     /locus_tag="VFD73_05445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73461.1"
                     /translation="MTDGLGNGADAAGPRAAPTETLARLWPATAVGVTSGLAYGLVTR
                     MLAEATRYGALFGVMTLSFLFVVPMVVGYLTVRPHPQPSWSYRLLAPWLPTILSVAAC
                     YAVGWEGTICIVMGLPVLLIFSSLGGVLGAVGPRRSAGAVGAILLPFVTAQLEHRIPA
                     HVSVHRVHTSIAIAAPPVTVWNEIVEVPTIQPAEQHPALFTRLGFPRPVSATLSRPGV
                     GGVRRARFEGGVLFLERVTDWVPGRLLRFSIAAQTDSIPPATLDRHVTIGGPYFDVLA
                     GRYDIRPLAGGGVVLDLTSELRVSTHFNAYASPWADAIMRSIQRNILQIIRTRAEAKH
                     FRTRWSE"
     gene            1506..2000
                     /locus_tag="VFD73_05450"
     CDS             1506..2000
                     /locus_tag="VFD73_05450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73462.1"
                     /translation="MDLIKKGRWDYVVLQQGPTSQQLGRDTLILASKMLEPLVTAAGG
                     QIAELMAWPSSENRSSFDGALQSCEEAAQAVNGICFPAGQAWRAAWAFDASLPLYGPD
                     GYHPSELGTYLAALVVYEGITGKSAEALPEQALVNGHALDIPINIVQQLQRVAHETVL
                     GYGR"
BASE COUNT          449 a          707 c          734 g          395 t
ORIGIN      
        1 agcggcgctc agacgcagag gtctgccgac gggcgcgtgg aatttcgcga cccgtgtcat
       61 actgcatcgg aaaggcttgg gcgtcaacag tcagtgtggc tcggtcggcg ctactccgac
      121 caacgagttc ggaaatgctt ggcttcagct cgggttcgaa tgatttggag aatgttgcgc
      181 tgaatgctgc gcatgatcgc gtcggcccag ggtgaggcat aagcattgaa atgggtcgac
      241 acccggagct cgctggtgag atccagaacg acaccgcctc cggccagagg cctgatgtca
      301 taccgtcctg ccagcacgtc gaagtacggt cccccaatgg tgacgtggcg gtccagtgtc
      361 gccggaggga tgctgtcggt ctgggcggcg atgctgaagc ggagcaggcg ccccggcacc
      421 cagtcggtta cccgctccag aaagagcacc cccccttcga aacgcgcacg ccgaacgccg
      481 ccgacaccag gccggctcag cgtcgcgctg accggacggg gaaagccaag gcgcgtaaag
      541 agtgccggat gttgctccgc gggctggatg gtaggcacct cgacgatttc gttccacacc
      601 gtaacggggg gtgccgcaat agcgatcgag gtatggaccc ggtgaacgct gacgtgagcg
      661 ggaatccggt gctccaactg cgcggtgaca aacgggagta agattgctcc gaccgcgccg
      721 gccgaccttc ttggccctac cgcaccgagc actccaccaa gcgagctgaa gatgagcagc
      781 accggcagcc ccatcacaat gcagatggtg ccctcccatc ctaccgcata gcaggcggcc
      841 acgctcagga tggtgggcaa ccacggtgcc agaaggcgat aactccagga tggctgagga
      901 tggggacgca cggtgaggta gcccactacc atggggacca caaacaggaa gctcagcgtc
      961 atcacaccga acagcgcacc atacctggtg gcctcggcca acatccgggt taccagtcca
     1021 tacgcgagac cgctggtgac gcctactgcg gttgccggcc agagccgggc cagcgtctca
     1081 gttggcgcgg cacgagggcc tgccgcatcg gcaccgttgc ccaaaccatc tgtcatgaag
     1141 attccgtgat gctgtcggag gaggcggcat caatcttaac tgtccgacgc ggggcggagc
     1201 agtcctgtgt gtggccgcag gacaacgcgc cgtcacactc tctgactcca atgaggtgaa
     1261 ccccactgcg taaggatctg ctaggactgg cgctgctggc ggccgcctgc gccggtgagc
     1321 cgtttcagca ggcaccggcg ccgcactacc acgttctctt tatcggcaac agtctcacgg
     1381 cggtcaacga tctgccgcat accgtctccg ggattgcgac aacggttcac gacagcattg
     1441 cggtcgaggc ggccacggga tccaaccttg ccataatcga ccatgtcaac ggtgcgaccg
     1501 aggcagtgga tctcatcaaa aaagggaggt gggactacgt tgtcttgcag cagggtccca
     1561 ccagccagca attgggccgc gacaccctca ttctggcgag caaaatgctc gagcctctgg
     1621 tgacggctgc cggtggacag attgcggagc tcatggcgtg gccaagctcg gagaaccgct
     1681 cctcattcga cggcgcgctc caatcgtgcg aggaggcggc tcaggccgtc aacgggatct
     1741 gtttcccggc ggggcaggcc tggcgcgccg cctgggcctt cgacgcttcg ctcccgctct
     1801 atggacctga tgggtatcac ccgtcagagc tgggcaccta cctcgcggcg cttgtggtct
     1861 atgaggggat caccgggaag agtgcggagg ccctgccgga acaagcgctg gtcaatgggc
     1921 acgctctcga tattccgatc aacatcgtgc agcagttgca acgcgtggct cacgaaacgg
     1981 tgctgggcta cggacggtga ggtggaactc ggaagcgaga gatggcgttc aataggctgg
     2041 tcgctggaac gaacgctcat cctggagctg ctatgcggcg tatgattctc actccgagca
     2101 ccaaccccgc tgctgttcag cagcccgatc cgctgcttct cttcattcag caggcccagc
     2161 tggcgctggt gtacgcgagc ccacgctaga atctcggaga atcgggcggc tggcgactta
     2221 tctcacccga ggggacgttg ggtcaacgcc cgctcgatgc cttcgaggtg acgggcaatc
     2281 cgctc
//
LOCUS       DASRPQ010000458         1402 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1306447, whole genome shotgun sequence.
ACCESSION   DASRPQ010000458 DASRPQ010000000
VERSION     DASRPQ010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1402
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1306447"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="VFD73_05455"
     CDS             complement(<1..363)
                     /locus_tag="VFD73_05455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086557956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI73463.1"
                     /translation="MLASASPDVLREMIREFAQRMMDADVEVRCNAGYGEVTPDRVNS
                     RNGYRRREWDTRAGTVELAIPKLRSGSYFPSFLEHRRRAERALASVVATSYLLGVSTR
                     RVEKLAASLGVAGLSKSQV"
     gene            563..>1402
                     /locus_tag="VFD73_05460"
     CDS             563..>1402
                     /locus_tag="VFD73_05460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73464.1"
                     /translation="MEPRWGDPEAPWWAKLRRAKSHISEVRQQVHALQVAEPWSVQRE
                     RAGPDGWAYRFRVHKPVPADLAAATGDAVANMRAALDNIAYELARHHAGTMSDAEERA
                     TFFPICENKAAFEKFFQHPLRSNLYSDTGRRALQCVQPFARADEMREHGVEPGTDPKS
                     DLLTDHAYALNTIWNIDKHRRLPGLAWAAEGPVWFDQVTGCRWRGHVSGVTLLPDGGV
                     LGELHGPAGSGRPQAELHYTIDLVLTDDPSPYPSLLGERLEWLHQSLTGWVVPRIFIV
                     ADGN"
BASE COUNT          257 a          501 c          424 g          220 t
ORIGIN      
        1 gacctgcgat ttgctcagcc cggccacgcc gagggaggcg gccagcttct ccacccgccg
       61 ggtcgagacc cccagcaggt acgacgtggc caccaccgag gccagcgccc gctccgcccg
      121 ccgccggtgc tccaggaacg acgggaaata cgacccggac cgcagcttcg ggatcgccag
      181 ctcgaccgtc cccgcccgcg tatcccactc ccgccgccgg tagccgttcc gcgagttcac
      241 ccggtccggc gtcacctcgc cgtaccccgc gttacaccgg acctcgacgt cagcatccat
      301 catccgctgg gcgaactccc ggatcatctc ccgcagcaca tccgggctcg ccgacgccag
      361 catctgctcg aacgactccc cggaaacggg cacaatgtca cctgcggcca cttcgctctc
      421 cttcgttgca ccgaaaccac ttcgaaggat cgcgaggtgg ccgcctcgca tcacggcaac
      481 acgccgtact ccggcaactc agtaccggtt accccataca ccacttccgt ggacgtgaac
      541 cgcggaactg ggagaatcgg gcatggagcc gcgctggggt gaccccgaag caccgtggtg
      601 ggcgaagctg cgcagggcga aatctcatat cagcgaagtc cggcagcagg tacacgccct
      661 ccaggttgcg gagccctggt ctgtccagcg cgagcgggct ggcccggatg gctgggcata
      721 ccggttcagg gtccacaagc cagttccggc ggatctggca gcagccaccg gggatgcggt
      781 ggccaatatg cgcgccgcgc tcgacaacat cgcctacgag ctggcccgcc accacgcagg
      841 aacgatgagt gatgccgagg aacgtgccac cttcttcccg atctgcgaga acaaggcggc
      901 atttgagaag ttcttccagc accctctgcg cagcaatctg tacagcgaca ccgggcgccg
      961 agcactccag tgtgtccagc cattcgcccg cgccgatgag atgcgggaac acggcgttga
     1021 acccggcact gatcccaaga gcgacctgct gacggaccac gcctacgcgc tgaacacaat
     1081 ctggaacatc gataagcacc gtcggctacc cgggcttgcc tgggcagccg aagggccggt
     1141 gtggttcgat caggtgacag gctgccgatg gcgggggcat gtctcgggag tcaccctcct
     1201 gcctgacggc ggcgtgctcg gtgagctgca cgggccagca ggctctggcc gaccacaggc
     1261 ggagcttcac tacaccatcg atcttgtgct caccgatgac ccgtcgcctt atccgtcact
     1321 gcttggggaa cgcctcgaat ggctccacca gtcgctcacc ggctgggtcg tgccgaggat
     1381 cttcattgtg gccgatggca at
//
LOCUS       DASRPQ010000459         1279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_993634, whole genome shotgun sequence.
ACCESSION   DASRPQ010000459 DASRPQ010000000
VERSION     DASRPQ010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_993634"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            247..>1279
                     /locus_tag="VFD73_05465"
     CDS             247..>1279
                     /locus_tag="VFD73_05465"
                     /inference="COORDINATES: protein motif:HMM:NF033594.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HZI73465.1"
                     /translation="MDETQQYSVAEMERMMKVQDVLLKAMAKKITWWAAAEIIGVTDR
                     TMRRWRERLEQDGYTGLADRRKGKPSAKRIPLATVEKVLGLYKERYYDLNIRHFHEKL
                     RDEHGMRLSYTWVQKALQGAGLVAKRHKRGPHRRRRPRRPLPGMLLHIDGSKHRWLND
                     DRWYDLIVILDDATSEIYYAQLVAEESTRTVMAGLREVIEKEGLFCALYSDRGSHFFV
                     TVKEGEKVDKHRLTQVGRAMKELGVQMIAAYSPQARGRSERSFGTWQGRLPQELRLAG
                     ISTVEGANAFLRGQYIGEFNSKFQVAATEKGTAFRRTSRSDLNWIFTVQTERVVEKDN
                     TVAIQDRWWQ"
BASE COUNT          288 a          322 c          457 g          212 t
ORIGIN      
        1 gacgaccccg gttaaatccc ctccattcac ctgtgactgg gccaaacaga tgctgctccc
       61 gagggcgaat gtgcaaaaag aaaagagcct tccccgcatc gagacacctc ccgatttggg
      121 gcactctacc gtaacgggat ctcgactgca aggtgtatat gtggagaatg tcgttagtat
      181 gtgagttgtc cggtcgagtt cacacgtgat ctgtccgctt ttggccgggg cgggtaatgc
      241 tgggtagtgg acgaaaccca gcagtactcg gtcgccgaga tggagcggat gatgaaagtg
      301 caagacgtgc tgctgaaggc catggcgaag aagatcacct ggtgggcagc ggcagaaatc
      361 atcggagtga cggatcggac gatgcggcgg tggcgcgagc ggctcgagca ggacggctac
      421 accgggctgg cggatcgtcg caagggaaaa ccgagcgcga aacggattcc gctggcgacg
      481 gtagagaagg tgcttggcct gtacaaggag aggtactacg acctgaacat ccggcacttc
      541 cacgaaaagc tgcgagacga gcacggaatg cggttgagct acacctgggt gcagaaagcg
      601 ctgcaagggg ccgggctggt ggcgaagcgg cacaaacggg gcccgcaccg gcggaggcgg
      661 ccgcggcgac cgttgccagg gatgctgctg cacatcgacg gcagcaagca ccggtggttg
      721 aacgacgatc gctggtatga cctgatcgtg attctggacg atgccaccag cgagatttat
      781 tacgcgcaac tggtggcgga agaatcgacg cgcacggtga tggccggctt gcgcgaggtg
      841 atcgaaaagg aggggttgtt ctgcgccttg tacagcgacc gtgggagtca ctttttcgtg
      901 acggtgaagg aaggcgaaaa ggtggataag caccgcctga cgcaggtggg gcgggccatg
      961 aaggaattgg gagtgcagat gatcgccgcc tattcgcccc aggcgcgggg ccggtcggag
     1021 cgcagctttg ggacctggca gggtcggttg ccacaagagc tccgactggc ggggatcagc
     1081 acggtggagg gagccaatgc ttttctgcgg gggcaataca tcggggagtt caacagcaag
     1141 ttccaggtgg cggcgacgga gaaaggcacc gcctttcggc ggacgagccg cagcgacctg
     1201 aactggatct tcacggtaca gacggagcgc gtggtggaaa aggacaacac ggtggccatc
     1261 caagaccgct ggtggcaaa
//
LOCUS       DASRPQ010000460         1197 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_680273, whole genome shotgun sequence.
ACCESSION   DASRPQ010000460 DASRPQ010000000
VERSION     DASRPQ010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1197
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_680273"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1197
                     /locus_tag="VFD73_05470"
     CDS             <1..>1197
                     /locus_tag="VFD73_05470"
                     /inference="COORDINATES: protein motif:HMM:NF037959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HZI73466.1"
                     /translation="LLVFFVTGLVCHGELAATRPSPARLTDFYLCIAVGGVLGGVFNA
                     LLAPAVFDSVLEYPLTILAACAVRPWPSPGESWRPLRWELALILAAAALLVGTRLSDP
                     ERPATAAVILASAVAAVVCLRMSRDPARFTLAIGLVVVAGMITAGAQKGILLKERNFF
                     GVRQVRDDAQKHMRWLMHGTTNHGAQSTDPAKRREPVTYYYRSGPIGDVFRAFPPRPG
                     RRVAVVGLGAGGLSAYAGPGEEWTFYEIDPDIARVASDTNYFTYLKDTPAKIRIVLGD
                     GRLSLAKAPDHYYDILVLDAFSSDAIPTHLLTREALAVYRSKLSDSGVLAWHLSNRYL
                     DLEPVLGRLIRETGIAGLIRVNIDRTPELESKGFPTVWAALAANPLKLGALRDDSRWR
                     PLGVRPG"
BASE COUNT          199 a          359 c          381 g          258 t
ORIGIN      
        1 cctcctggtg ttctttgtga cgggactggt atgccacggg gagctcgcgg cgacgagacc
       61 gagccccgcc cggctgacgg atttctactt gtgcatcgcc gtgggcggag tgctgggggg
      121 agtgttcaac gcgctgttgg cgccggctgt cttcgattca gttctcgagt acccgctcac
      181 cattctggcc gcgtgtgcgg ttcggccctg gccttcgccc ggcgagtcgt ggagaccatt
      241 acgatgggag ctggcattga tcctggcagc agccgcgctg ctggtcggga cccgcctgag
      301 cgatcccgag cgtccggcca ctgctgccgt catccttgcg tccgccgtgg cagcggtggt
      361 ttgccttcgg atgagtcggg atcctgcgcg gtttaccctg gcgatcggtt tggttgtggt
      421 tgccggaatg attactgccg gagcacagaa aggaattctc ctgaaggaac gcaacttctt
      481 tggcgtccgg caggttcgag atgatgctca gaagcacatg cgctggctga tgcacggtac
      541 gaccaaccac ggcgctcaaa gcaccgatcc tgcaaagcgg agagagccgg tgacgtacta
      601 ctaccgctcg ggccccattg gcgacgtatt ccgcgcattc ccgccccggc ccggtcggcg
      661 cgtagcggtc gtcggactcg gagctggtgg actttctgcc tatgccggtc cgggggaaga
      721 gtggaccttc tatgagatcg atcccgatat cgcgcgagtc gccagcgata cgaattattt
      781 cacgtacctg aaggacaccc ctgccaagat ccggatcgtt cttggagacg gacgtttatc
      841 cctggcaaag gcgccggatc actactacga catcctggtg ctcgatgcgt tcagctcaga
      901 tgccattccc acccacctgc tcacccgtga ggcgctggcg gtttaccgct ccaaactgtc
      961 tgattcgggc gtgcttgcgt ggcacttgag caatcgttat ctcgacctgg agccggtgct
     1021 aggaaggctc attcgggaga ccgggatcgc cggactgatc cgcgtcaata tcgatcgcac
     1081 ccctgagctt gaatcaaagg gatttccgac ggtctgggcc gccctcgctg ccaatccttt
     1141 gaagctgggt gcccttcgag atgatagcag atggcgaccg ctgggggttc gaccggg
//
LOCUS       DASRPQ010000461         3356 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1620424, whole genome shotgun sequence.
ACCESSION   DASRPQ010000461 DASRPQ010000000
VERSION     DASRPQ010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3356
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1620424"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..656)
                     /locus_tag="VFD73_05475"
     CDS             complement(<1..656)
                     /locus_tag="VFD73_05475"
                     /inference="COORDINATES: protein motif:HMM:NF014731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HZI73467.1"
                     /translation="MTRRQKKGGPRGRALLGLALVALGVVYGDIGTSPLYALKQCFSG
                     LHSIPPTPENVIGVLSLVVWSLNFVVSFKYISFVLKADNRGEGGILALLALVRPLGKS
                     SGVRAILITLGLFGAALLYGDGVITPAISVLGAVEGLSVATPAFQPYVWPLAVFILSV
                     LFFFQRHGTARVGRVFGPIMGLWFASIALLGVRGILMKPSVLRAINPWYAFDFFVRDG
                     L"
     gene            complement(653..1120)
                     /locus_tag="VFD73_05480"
     CDS             complement(653..1120)
                     /locus_tag="VFD73_05480"
                     /inference="COORDINATES: protein motif:HMM:NF019499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin K epoxide reductase family protein"
                     /protein_id="HZI73468.1"
                     /translation="MKYRMTAALLSLAGLFISAYLYLYKIGKIGTLACGTGACETVQL
                     SQWSRFGGLEVSLIGLLGYALLLGLTLVALQHPPSSRSWPMTLLLILSGLGVAFTGYL
                     TYLELFVIHAICRWCVGSAVIILGIFIVGLLEYRRTQRSAGRTSPYPETSLTR"
     gene            complement(1131..1811)
                     /locus_tag="VFD73_05485"
     CDS             complement(1131..1811)
                     /locus_tag="VFD73_05485"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HZI73469.1"
                     /translation="MATPQAGVRRFYTIFAVLVVVGLGILAYLIFKPQTVSIPANVTV
                     QASDTSGFRGYIKGSPNAPIEITEYADFQCPFCQTFATLQMPTIDERLIQTGRVRWRY
                     RDFPLQQHPFSRLAAHSAACADEQGKYWQQHQRIYEGQSEWSEARDAGAIFRNYAKAN
                     GLDLGRYDACMKSGKYAGRIQASYNEGVQVGVNSTPTLLIGDRLYKGRFDSDAIIKMV
                     DSLAPRSK"
     gene            complement(1787..2092)
                     /locus_tag="VFD73_05490"
     CDS             complement(1787..2092)
                     /locus_tag="VFD73_05490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73470.1"
                     /translation="MAEHDEVYNEERANRLAALLRALAARIQELDRTGHLLRGVPELL
                     RLMGDARSEMFHYEVRSTYDTPEVADNRRIVEEAQRQDPFLPDDPEDDEPWRRPRPE"
     gene            2312..2575
                     /locus_tag="VFD73_05495"
     CDS             2312..2575
                     /locus_tag="VFD73_05495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73471.1"
                     /translation="MSKKKIRNTPEAASFAQARDELFSHILRCGVIDALPEHQKDWFD
                     DTMGYIGERYEDLSDVELAQLRTLGERYCQPVRRVEPLESGVA"
     gene            complement(2624..2992)
                     /locus_tag="VFD73_05500"
     CDS             complement(2624..2992)
                     /locus_tag="VFD73_05500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73472.1"
                     /translation="MATLSRQSAVVAGGYGALRTSGRTRLSLDLGIGVGGNDLVWRAE
                     ALGHFLFSPEERRKPGFYIAGGLAVAGGDTTHGYLVLTLGLEQRPQSRSGWALEAGVG
                     GGVRLVGGYRWRFESLASRK"
     gene            complement(3072..>3356)
                     /locus_tag="VFD73_05505"
     CDS             complement(3072..>3356)
                     /locus_tag="VFD73_05505"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HZI73473.1"
                     /translation="TLLLAAAACTGSDVVVILQKMRVQLSEFQIEAAGVRRETEPRRY
                     LAIHLTYRIGGSGLDESKARRAIDLSLEKYCSVVHSLAPDIAVTYALSLA"
BASE COUNT          704 a         1064 c         1003 g          585 t
ORIGIN      
        1 agtccatccc gaacaaaaaa gtcgaacgca taccacgggt ttatcgctcg aagtacactt
       61 ggcttcatca gaatcccgcg tacccccaat agtgcaatcg acgcgaacca caggcccatt
      121 atcgggccaa agactcggcc cacccgcgca gtgccgtgcc gctggaagaa gaagaggacg
      181 ctcaggatga agaccgccaa cggccacacg tagggctgga aggccggggt agctacgctc
      241 aagccttcta ctgcgcccaa taccgagatt gccggcgtga tcaccccatc cccataaagg
      301 agcgcggctc cgaacagacc cagggtgatc aagatcgccc gcacgcctga gctcttgccc
      361 aacggtcgaa ccagggcgag caaagcgaga atccccccct ctccacggtt gtcggccttg
      421 agcacaaagc tgatgtactt gaatgacacc acgaagttga gcgaccagac caccagtgac
      481 agaaccccga tgacgttttc gggagtcgga ggaatgctgt ggagcccgct gaagcattgc
      541 ttaagcgcat agagcgggct ggtcccgatg tccccataga cgacgccaag cgcgaccaat
      601 gccaggccga ggagggctcg tccgcggggt ccgcctttct tctggcgcct ggtcatcggg
      661 tgagggaggt ctcgggatag ggcgacgtac gacccgcact ccgctgagtg cgccgatact
      721 ccagaaggcc tacgatgaat atgccgagaa tgatgacagc ggagccaaca caccagcgac
      781 agatggcgtg aatgacgaac agctccagat aggtcaggta tccggtgaac gccacgccca
      841 accccgaaag gatcaggagc agggtcattg gccagcttcg gctcgagggt ggatgctgca
      901 gtgccacgag agtgagcccg agcagcagag cgtaccccag cagtccgatc agggaaacct
      961 ccaaccctcc gaagcgactc cactgactca gctgcactgt ctcacacgca cccgtgccgc
     1021 aggcgagggt gccgatcttc ccgatcttgt agaggtagag ataggcggaa atgaacagtc
     1081 cggccaggct caagagcgcc gccgtcatgc ggtatttcat cagctaccga tcacttggag
     1141 cggggcgcca gcgagtccac cattttaatg atcgcgtccg agtcgaaccg gcctttgtag
     1201 agccggtccc cgatcagcag cgtgggcgtc gagttgaccc cgacctgtac gccttcattg
     1261 tagctcgcct ggatccggcc ggcatacttg ccggatttca tgcaggcgtc atagcgtccg
     1321 aggtccagcc cgttggcctt ggcatagttg cggaagatgg cgccggcgtc gcgcgcttcc
     1381 gaccattccg attgaccctc ataaatgcgc tggtgctgtt gccagtattt cccctgctcg
     1441 tcggcgcagg cagccgagtg cgccgcgagc ctggaaaagg gatgctgctg caaagggaag
     1501 tcccgatagc gccagcgcac cctgccggtt tgaatcaagc gttcgtcgat cgtcggcatc
     1561 tggagggtgg cgaatgtctg gcagaaggga cactggaaat cggcgtattc ggtgatctcg
     1621 atcggggcat tgggcgagcc cttgatatag ccacggaacc cggaggtatc cgaggcctgc
     1681 accgtcacgt tagccgggat gctgaccgtc tggggtttga agatcagata ggcgagaata
     1741 ccgagaccaa ccaccacgag aactgcgaag atggtgtaga aacgccttac tccggcctgg
     1801 ggcgtcgcca tggctcgtcg tcctcgggat cgtcgggtag gaatggatcc tgccgctggg
     1861 cctcttccac gatacgccgg ttatcggcta cttcgggcgt gtcgtaggtg cttcggacct
     1921 cataatggaa catctcgctt cgggcatctc ccatcagccg aagcagttcc ggcacgccgc
     1981 gcagcaggtg accggtccgg tccagctcct gaatgcgggc cgccagcgct cgcagcagag
     2041 cggccaggcg attagcccgc tcctcgttgt acacctcgtc atgctctgcc atagctacct
     2101 cgagagcgtc gcgctctcgc tcgagttcag atcttcgggc agggaaagat aatgggggac
     2161 tgggagccgg gagcgggatc tcgccgggag tctcagcccg cgctaagcac ggaccgaagc
     2221 ggatgcttgg cagccatttt gcagcatctg tagcaaccgg ctatctttac gctcgaggac
     2281 atttatatct gattcgccaa aaggacggtg catgagtaag aagaaaatcc gcaatacccc
     2341 tgaggcggcc tctttcgccc aggcacgtga tgagctgttc agccacattc tccgctgcgg
     2401 tgttatcgac gccctgccgg aacatcagaa ggactggttc gacgatacca tgggttatat
     2461 cggagagcgg tacgaagacc tgagcgacgt ggagctagcc cagctccgga ccctcggtga
     2521 gcgctactgc cagccagtcc gccgggtcga gccactggaa tccggcgtcg cctgagacac
     2581 aggccgagat gaagcgcccc ggagtagatt ctccggggcg ttgctatttc ctggaggcca
     2641 gcgactcaaa cctccaccgg taaccgccca ccagccgaac ccctcccccg acgcctgcct
     2701 ctagcgccca gcccgaacga ctctgggggc gctgctcgag gcccaaggtc agaaccagat
     2761 agccatgggt cgtatctccc ccagcgactg caaggccgcc cgcgatgtaa aacccgggct
     2821 tgcgccgctc ctccggactg aagaggaagt gtcccagcgc ctcggctcgc cagaccagat
     2881 cgtttccacc gacgccgata cccagatcga gagacagccg cgttcgtcct gatgtcctta
     2941 gggcaccgta tccgcccgca acaactgccg attgccggga cagggtcgcc accgactgga
     3001 ctccgatctc cgtcctctgc tgcgctcccg ccgtccggcc aacccataac aacactgtgc
     3061 ccagcagcag ctcacgcgag cgacagcgca taggtcacgg caatgtccgg agccagggag
     3121 tgcaccaccg agcaatattt ctcgagcgac agatcgatag cccggcgggc tttggactcg
     3181 tccaatccgc ttccgccgat ccgataggtg aggtggatcg cgaggtatcg ccgcggctcc
     3241 gtctctcggc gaacgccggc cgcctcgatc tggaactcgc tcaactgaac ccgcatcttc
     3301 tgcaggatga ccaccacatc agagccggtg catgcggcgg ccgccagcag gagagt
//
LOCUS       DASRPQ010000462         2806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3500208, whole genome shotgun sequence.
ACCESSION   DASRPQ010000462 DASRPQ010000000
VERSION     DASRPQ010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2806
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3500208"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..888
                     /locus_tag="VFD73_05510"
     CDS             <1..888
                     /locus_tag="VFD73_05510"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HZI73474.1"
                     /translation="RTGIVNLYLYGRPGAPNGSWVLIDTGLPGSAGRIMHAAEEWIGP
                     WARPVAIILTHGHFDHVGALKELLRHWNVPVYAHRLELPFLTGRSSYPPPDPSVGGGA
                     MAALSRLYPRGPIDLGDQVQALPENGTVPGMPGWRWIHTPGHTPGHISLFRDEDRTLI
                     AGDAFVTTKQESATAVLAQRPELHGPPAYFTPDWEAARDSVERLAALEPLRVATGHGP
                     PLEGEAMLRDLHALARNFSRRAVPAEGRYIRQPAVFDENGVVAVPPPVPDRLPRVLLG
                     VGLGLMLTGMLSRRQHRSR"
     gene            complement(885..1346)
                     /locus_tag="VFD73_05515"
     CDS             complement(885..1346)
                     /locus_tag="VFD73_05515"
                     /inference="COORDINATES: protein motif:HMM:NF016130.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HZI73475.1"
                     /translation="MPNRRDFIVSAAGLLLTAAWTRRVPASAPHQSITIYKSKTCGCC
                     AKWVEHLQAKGFTTQVHDDESMDQVKENLGVPSALRSCHTGLAGRYLIEGHVPAGDIR
                     KLLAERPAVAGLAVPGMPSGTPGMAQSEADAGNYVVLAFQLDGTSRPYAKH"
     gene            complement(1356..>2806)
                     /locus_tag="VFD73_05520"
     CDS             complement(1356..>2806)
                     /locus_tag="VFD73_05520"
                     /inference="COORDINATES: protein motif:HMM:NF039904.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HZI73476.1"
                     /translation="RELRAVQGRRSCVSGRCRAGMSKAAGPRGSRTTRARAAPVSSSN
                     TDPADTSRFPTPPPVRPAEIIRDPLWDNIRVDRAALLALDTPTMQRLRYIRQVGHSFL
                     VYPGATHTRFEHALGAYHLTRRAIASLEEMGELAAATAEDCLAVRMAALLHDIGHYPF
                     SHALEEAGFPSHEVLGVAKLTQGELGQRLVEIGGHELPRAIGALISGVSRNPLQGLIS
                     GSIDLDKVDYLSRDARMCGVPYGTVDVDRLLSSLTLVEVEPNRWEVGVQEKGVSALES
                     LLFAKYQMYRNVYWHHAVRSATCMFKRAVRGAVRRGSVTVEHIAQATDDGLMELIVER
                     DRNQLAAAIRARRLHKRALDLPASDVPGDVQTWVAQDPDLLEQVEDALGAEVGLSAGA
                     LLIDFPARSAMLGVNLPLRTRSGSIERLTDAGRAGHLGLPVVADELYRSARRLRIFVA
                     ETPSRALESVLDLLTCPADEVRQSLDCGASLL"
BASE COUNT          503 a          886 c          923 g          494 t
ORIGIN      
        1 agaaccggga tcgtcaatct gtatctgtac ggccgacccg gcgccccaaa tgggtcgtgg
       61 gtgttgattg acaccggcct gccgggatca gccggccgaa tcatgcacgc agccgaagag
      121 tggattggcc catgggcccg ccccgtggcg atcatcctga cgcacggaca cttcgatcac
      181 gtcggggcgc tgaaagagct actccggcat tggaacgtgc cggtctatgc tcatcggctg
      241 gaactgccgt ttctcaccgg gcgctcatcg tatccgccgc ccgatccgag cgtgggtgga
      301 ggagcgatgg cggcgctgtc gcgtctgtac ccccgcgggc ctatcgattt gggcgaccag
      361 gtgcaggcac tcccggagaa tggaacagtt ccgggcatgc ctgggtggcg ctggatccac
      421 acgccaggtc acacgcccgg ccacatctca ctcttccgtg atgaggaccg cacccttatt
      481 gccggggatg ccttcgtgac gacgaagcag gagtcggcca cagcggtgct tgcccaacgt
      541 cccgagctcc acgggccgcc agcctacttc acaccggact gggaggcagc gcgagactcg
      601 gtcgagcggc tcgccgctct ggaaccacta agggtggcaa ccggtcacgg gccgccgctg
      661 gagggggaag cgatgcttcg agatctccac gcgctggccc gcaacttctc caggcgagcc
      721 gttccggcgg aaggaaggta catccgccag ccggcggtct tcgatgagaa tggcgtggtg
      781 gcggtaccgc cgccggttcc tgatcgactc ccgcgagtgc tactcggggt tggattgggt
      841 ctgatgctga ccgggatgct cagccggcgc cagcatcgtt cgcgctagtg tttggcgtag
      901 ggacgggagg tcccatccag ttggaaggca agcacgacgt aattgcccgc atccgcttct
      961 gattgagcca tgccgggtgt tcccgagggc atgcccggta ccgccagtcc ggcgacggcg
     1021 ggccgttcgg ccagaagctt acgaatgtcg cctgccggca catgtccttc tatcagatac
     1081 cgcccggcca gcccggtatg gcaggatcgg agcgcggagg ggacaccgag gttttccttt
     1141 acctgatcca tcgactcgtc atcgtggacc tgggtagtaa aacccttggc ctgaaggtgc
     1201 tcgacccatt tggcacagca gccgcaggtc ttgctcttgt agatcgtgat ggactggtgc
     1261 ggcgcggacg caggaacccg ccgggtccaa gcggctgtta gcagaagacc agcggcgctc
     1321 acaataaaat cacgacggtt cggcatacat cctcgtcaaa gcagagacgc cccgcagtcg
     1381 agagactggc gaacttcgtc tgcgggacag gtcagtaggt ccagcacgga ttccagcgca
     1441 cgcgacggtg tttcggccac gaagatacgt agccgacgtg cactgcggta cagctcgtcg
     1501 gccaccacgg gcagcccaag gtgaccggcg cgccccgcat cggtaaggcg ttcgatgctg
     1561 cccgaccggg tacgcaacgg caggttgacc cccaacattg ccgagcgggc cggaaagtcg
     1621 atcaacagcg cgccggcgct gagtcctacc tcggccccca gggcgtcttc aacctgctcc
     1681 agcaggtctg gatcctgcgc aacccaggtc tgcacgtctc cgggaacgtc actcgcaggt
     1741 agatcaaggg cccgcttatg aaggcgccga gcacggatgg cggcggccag ttggttccgg
     1801 tcgcgttcga cgatcaactc catgagtcca tcgtcggtcg cctgcgcgat gtgctctacc
     1861 gtaacgcttc ctcgacgcac cgctccccgc actgctcgtt tgaacatgca ggtggcggag
     1921 cggacggcgt ggtgccagta gacgttgcgg tacatctggt atttggcaaa gagcagcgac
     1981 tcgagggcgc tcacaccctt ctcctgaacg ccgacctccc agcggtttgg ttcaacctcg
     2041 accaacgtca gcgaggagag caggcggtcg acgtccaccg tcccgtaggg tacaccgcac
     2101 atccgcgcgt cgcggctgag atagtccacc ttatcgagat cgatggaacc ggagatcagg
     2161 ccctgcagtg gattccggct cactcccgaa atgagggcgc ctatcgcgcg gggcaactcg
     2221 tgcccgccta tttcgaccag tcgctgaccc agctcgccct gggtcaactt cgcgacgccg
     2281 aggacctcgt gcgaggggaa tccggcttcc tccagtgcat gagagaaggg gtaatgcccg
     2341 atatcgtgca ggagtgccgc catacgcacg gcgaggcagt cctcggccgt cgcggcggca
     2401 agctccccca tctcttctaa agacgcgatg gcacggcggg tcagatggta cgcgccgaga
     2461 gcgtgctcga aacgggtgtg tgtggcgcca gggtagacca gaaaactgtg gccgacctgc
     2521 cggatgtacc ggagacgctg catggtaggc gtatcgagtg ccaggagggc ggcacggtcg
     2581 acgcggatgt tgtcccagag aggatcgcga atgatttcag caggacggac gggtggaggg
     2641 gtagggaagc ggctggtgtc ggccggatcg gtattcgagc tgctgacggg tgccgctctc
     2701 gctcgtgtcg tacggctccc ccggggtcct gccgccttgc tcatgccggc ccggcacctg
     2761 ccactgacgc aggaacgtcg gccctgtact gctcgaagtt ctcgcg
//
LOCUS       DASRPQ010000463         1270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_680663, whole genome shotgun sequence.
ACCESSION   DASRPQ010000463 DASRPQ010000000
VERSION     DASRPQ010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1270
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_680663"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(380..859)
                     /locus_tag="VFD73_05525"
     CDS             complement(380..859)
                     /locus_tag="VFD73_05525"
                     /inference="COORDINATES: protein motif:HMM:NF024304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HZI73477.1"
                     /translation="MLKADLSSPTIPAPPGSGASARSVVERLDEAECMELLSTARIGR
                     LIYNSRYGPVALPSEYKILDGSIVFPTYRTLFTEEDLRTGIAHAEYQVAVEVDQTDPE
                     AREGWLVLVRGTAHHLDTEAERASIASLGLKPWVEGEPEHFIRVNPISIGGQRLRQS"
BASE COUNT          234 a          388 c          411 g          237 t
ORIGIN      
        1 gcgggcatgg gaatcaacgg ctcgtcacct tgcgggtact cagcagtcat ccagcctgcc
       61 tcctctcacg tccagcaaca gaataaaccg tgccgcgcct cgaggcggag tatggatatt
      121 cgcccgcgcg gcactcccgg cgacgttacg cacagtagca ggacaggagg aggccgacgc
      181 ttcgctgtgg accggttcat ggaccgagcc acccgtgcaa acagtgcgat cagagtcatc
      241 ggaggcagag ctccgtggta cccgtgcagg tagtgcctcc gatgcttggg gccgtagttc
      301 tcatagtccg ccggtcgtgg gttcgagccc cacccgcccc acacatagag caactgaagc
      361 ggtcatagtg cagctggcgt catgactggc ggagacgttg gccaccgata ctgatggggt
      421 tgacgcggat gaagtgctcc ggttcgccct cgacccacgg cttgaggccc aagctggcga
      481 tcgatgcgcg ctcggcctcg gtgtctaggt gatgggctgt gccacggacg agtaccagcc
      541 atccctcgcg tgcttcagga tcggtttggt cgacctccac ggcaacttgg tactcggcgt
      601 gcgcgatacc ggtacgcaag tcctcttctg tgaagagggt ccggtaggtg gggaaaacga
      661 tcgatccgtc aaggatcttg tactcggacg gcagtgccac aggcccgtac cggctgttgt
      721 aaatcaggcg cccgattctt gcggtgctga gcagctccat gcactcagcc tcatccaacc
      781 gctccactac gctgcgagca ctagctcccg agccaggcgg agcagggata gtgggagaac
      841 tgagatcggc tttgagcatg acagggttcc tttcgcctgg cttgaccgca cccaccgtcc
      901 ggggcgggtg tgttggcgtg agtcgctttt cttgggtgag gtaaaccacg gtgacgcgtc
      961 ggcgagtgat cgtgcctcaa ccgattcgca tgatccgcgg cggcggcaat cgcgccgtcc
     1021 gatagcgatg ttgatctggc tgggagtgca gcgttgccag tcgctgagag caggagccgc
     1081 acgcgccgcg cgaccttggg atcacgacca ggccaaaggg atgacacccg cccatagctg
     1141 cgcggccttc accaacccgg ctttagccag caagcgagct tacgactcgt gaggtccgtc
     1201 tcgggatcgg gtaaaccccg gtcgacgggc tgaacctagc cggtggcgtt gtgaacgtgc
     1261 acgcaccgca
//
LOCUS       DASRPQ010000464         2491 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1307138, whole genome shotgun sequence.
ACCESSION   DASRPQ010000464 DASRPQ010000000
VERSION     DASRPQ010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2491)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2491)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2491
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1307138"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(211..453)
                     /locus_tag="VFD73_05530"
     CDS             complement(211..453)
                     /locus_tag="VFD73_05530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73478.1"
                     /translation="MKTVLTALALVAGIAACNKGGTDSARVGESADTSITPRTTQDTT
                     IVTSDTTVHSDTTVKEGDVKHTKPGEMSRDTTRKRH"
     gene            661..1425
                     /locus_tag="VFD73_05535"
     CDS             661..1425
                     /locus_tag="VFD73_05535"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HZI73479.1"
                     /translation="MAAQGKIWIGTSGYVYRHWRKGVFYPSGLKTKEELTYYAAHFPT
                     VELNNPFYRLPTGEMFARWRSATPEGFEFAVKASRYITHIKRLRDSGNEIELLMSRAR
                     QLGPKLGPVLFQLPPTQQLDLARLQEFLPLLSPDQRWVLEFRHSSWHVSAVYRALAEH
                     GVALCIPVGGGLHPDRITTAAFSYIRMHRGREPGGGFTAEELRDWAAQLRALSSVGKD
                     VYIYFNNDWEGYAIRDARIMQAFLGLTADNPARAAQ"
     gene            complement(1435..2004)
                     /locus_tag="VFD73_05540"
     CDS             complement(1435..2004)
                     /locus_tag="VFD73_05540"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HZI73480.1"
                     /translation="MDALTAILSRTSVRRFRTEPLDPGLIARVLDCAVRAPNHKLTEP
                     WRFVVLTGAARDRFADIRAQHRLKRFADPASTEAQTAADKVRREARETPAYVVVSMIV
                     SSDELTREEDYAATMMAIQNLVIAAQALGLGTYLRTGGVMAHPALRELAGIPADQRVV
                     GIVSLGYPAETETPRRRKPAAELTRWVDR"
     gene            complement(2024..>2491)
                     /locus_tag="VFD73_05545"
     CDS             complement(2024..>2491)
                     /locus_tag="VFD73_05545"
                     /inference="COORDINATES: protein motif:HMM:NF001810.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HZI73481.1"
                     /translation="NLRAFVQARMRNLNTGSTFEHRFSATEFIEEARLDTKQLQVLYR
                     DGNGVHVMDAETYDQFTLDDETAGNQGQWLEPGMTFQAEWLNGRPIAIELPAVAELEV
                     VETAPVMKTATKTASTKPARLSNGVTIQVPEFINEGERVRVNPRDGVYLERAK"
BASE COUNT          435 a          805 c          773 g          478 t
ORIGIN      
        1 ttcaccagaa aacgcgagct cgggatgaga ctgccgagca tcttgggatg ctttagaaaa
       61 ttgcggccga agagcaggag ctgctcggaa cgcgaggcgc gctgtgcagg cacggtggag
      121 atgatctgcc tttcacgagg ggaacggcgg gccggcgccg gtcctgccgg cgccggtggc
      181 ggccgccgaa gcggctcgcc cacaagttgc ctagtgccgc ttccgggtgg tgtcccggct
      241 catttccccc ggcttggtgt gcttgacatc accttccttg acggtggtgt cagaatgcac
      301 ggtcgtgtca ctagtcacga tcgtggtgtc ctgggtggtg cggggggtga tacttgtgtc
      361 agccgattcg ccgactcggg ccgaatcggt tccgccctta ttgcaagcgg cgataccggc
      421 gaccagcgct aaagcggtga gtacggtttt catctgaccc tccgagtaga tgtagaagtc
      481 gtcctggcct aggcctgcga tcggtctggc caggccggcc cgtggcatcc agccctgtag
      541 gctgtcaccc ctccgcatcc cggtgcagtg atgtgtctca ccccgccggc ggcatggcct
      601 cgcggtagag gctcgcaatt ttactcccga actcggacct ctgcaacggt atattggcgg
      661 atggctgcgc agggcaagat ctggatcggc acctcgggat acgtgtatcg gcactggcgc
      721 aagggcgttt tttatccgag cggtctaaag accaaagaag agttgaccta ctacgcagcg
      781 cactttccca ccgttgagct gaacaatccc ttctaccgac tgcccaccgg tgagatgttc
      841 gcccgctggc gctccgcaac gcctgaggga ttcgaatttg ccgtaaaggc aagccggtac
      901 atcacccata tcaagcggct tcgggacagc ggcaatgaga tcgagctcct catgagccgc
      961 gcccgccaac tgggcccgaa gctcggcccc gtgctgttcc aactcccacc gactcagcag
     1021 ctcgacttgg cacggctgca ggagttcctg ccattgcttt cgccggacca gcggtgggtg
     1081 ttggaatttc ggcactccag ctggcacgtc tccgccgtgt atcgcgcatt ggccgagcac
     1141 ggcgtcgctc tctgtatccc ggtcggaggc ggactccacc cggaccgaat cacgacagca
     1201 gccttcagct acatccgcat gcaccgcggg cgggaaccgg gcggagggtt taccgcggaa
     1261 gagctccgcg actgggccgc tcagcttcgg gcgctctcga gtgtcggcaa ggatgtgtac
     1321 atctacttca acaacgactg ggaaggatac gcgattcgcg atgcccggat catgcaagcc
     1381 ttcctgggac tgaccgccga caaccccgcg cgcgcagcgc agtgaagttg acagctaccg
     1441 atcgacccag cgcgtgagct ccgccgcagg cttccgccgc cggggggttt cggtctcagc
     1501 agggtagccc aacgagacaa ttcccaccac tcgttggtca gcgggaattc ccgccagctc
     1561 gcggagggca gggtgggcca tcactccccc ggtccgcaga taggtcccca gccccaatgc
     1621 ctgcgccgcg ataaccaggt tctgaatggc catcatagtg gcggcgtaat cctcttcccg
     1681 ggtcagctcg tcagagctca cgatcatgga caccacgacg tatgcgggcg tctctcgggc
     1741 ttctcgccga accttatcgg ccgcggtctg cgcctcagtg gaagcgggat cggcaaaacg
     1801 cttcagccgg tgctgggccc ggatgtcggc aaagcggtcc cgggcggcac cggtgaggac
     1861 cacgaagcgc caaggctcgg tcagcttgtg gttgggtgcg cgcaccgcgc agtcaagtac
     1921 tcgggcaatc agcccgggat ccagtggctc ggtccgaaag cgccgaaccg aggttcggct
     1981 caaaatggca gtcagggcat ccacgactcg cgctcttccc ggctcacttg gcccgttcca
     2041 gatacacgcc gtcccgggga ttcacccgca cccgctcgcc ctcgttgatg aactcgggca
     2101 cctggatggt gactccgttg ctgagacgcg ccggcttggt gctggcggtc ttcgtggccg
     2161 ttttcatcac cggggccgtc tcgaccacct ccaattccgc gaccgcgggc aactcgatcg
     2221 cgatgggacg cccgttcagc cattccgcct ggaacgtcat accgggttcc agccactggc
     2281 cctgattgcc ggcggtctcg tcatccagag tgaactggtc gtaggtctcc gcatccatga
     2341 catggacacc attgccatcc cggtagagca cctgcagttg cttggtgtcc aggcgcgcct
     2401 cctcgatgaa ctcggttgcg ctgaaccgat gctcgaacgt cgaaccggta ttcagattcc
     2461 gcattcgagc ctgcacgaag gctcgcaggt t
//
LOCUS       DASRPQ010000465         1387 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4127799, whole genome shotgun sequence.
ACCESSION   DASRPQ010000465 DASRPQ010000000
VERSION     DASRPQ010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1387
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4127799"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1387
                     /locus_tag="VFD73_05550"
     CDS             <1..>1387
                     /locus_tag="VFD73_05550"
                     /inference="COORDINATES: protein motif:HMM:NF015644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HZI73482.1"
                     /translation="RFFMLLVLLALTGVAALYMLVGAIRWIDRRPAINHHARAHIGWL
                     LAALAVGLAWGYLLTPYQLLVRPAELLSDATWRSALLSSPVLAGIALAAGGLSALWAS
                     RPRHTLVVSGWIIVVLASMVASWLLPPMLSSSREPAIDTRAYEQLTRAAFGLETLRDE
                     TLHPFGTPSLPPVPSLWNPAAVAQALPGDSAHLLSIDPVLLTPDAKRRPIWLAIRSSA
                     PGRISTLAIADQRTSPSGEPLFYRLSDTVPRPIPAQLLDLHGDLLAPEAEPYRIRETD
                     APGVLLDGWLRRLTLAWALQAGELLAETPSGSRVDWYLSPEERLNRLAPFAEWSAPIP
                     RIIDGELVWLLDGYVSSSSFPLSSRAVWRGREVGLIRASFLATVNAETGAVRVYLQPS
                     AGPLAATWGRVAEGIVEPASAIPEAVLREAAYPEDLFRIQAQQLERDPWNAGLLSRRS
                     GQGTAAPTTPQV"
BASE COUNT          187 a          483 c          445 g          272 t
ORIGIN      
        1 cgctttttca tgcttttggt gctgctggcg ctgaccggcg tcgctgccct ctacatgctg
       61 gttggggcca ttcggtggat agaccgtcgc ccggccatca accatcacgc acgagcccac
      121 atcggttggc tgctcgctgc actggcggtc ggtctcgcgt ggggatacct gctcactccg
      181 tatcagttgc tggtccgccc cgccgagctg ctgagtgatg cgacctggcg ctcggcgctg
      241 ctttcctcgc ccgtgctggc gggcatcgct ctggctgctg gtgggctctc tgccttgtgg
      301 gcttcgcggc cgcggcacac gctcgtcgtt tccggctgga ttatcgtggt gctcgcatcg
      361 atggtggcca gctggttact gccgccaatg ctgagcagtt cacgggagcc cgcgatcgat
      421 acccgcgcct atgagcagct gacccgggcc gcattcggtc tggagacgct gcgtgatgag
      481 acactgcacc cattcggcac tccctctctc cctccggtgc catcgctctg gaacccggct
      541 gccgtggccc aggcactgcc gggcgactcc gcccatctcc tctccatcga tccggtcctg
      601 ctcacacccg atgcgaagcg gcgtcccatc tggctcgcca tccgttcgag tgccccgggg
      661 cggatctcaa cgctggcgat cgccgatcag cggacgagtc cgagtggcga gccgctcttc
      721 tatcgcttga gtgacactgt tccgcgtccg attcctgccc agctcctcga cctgcacgga
      781 gacctgctcg cgcccgaagc cgagccgtat cgcatccgcg agaccgacgc cccgggagtt
      841 ctgctggatg gatggctccg ccggctgacg ctggcctggg ccctccaggc gggcgagctc
      901 ctggcggaga caccgagcgg gagccgggtg gactggtatc tctctcccga ggaacgtctg
      961 aaccggctgg cgccgtttgc tgaatggagt gcgccgatcc ctcggatcat cgacggcgag
     1021 ctggtctggc tgctcgacgg ctacgtttcc tcgtccagct ttccgctgag cagccgagcg
     1081 gtatggcgcg gtcgcgaagt tggcttgatc cgggcctcgt tcctggcgac ggtcaacgcg
     1141 gaaaccggcg cggtacgagt gtacctgcag ccctcggccg gtccactcgc cgcaacctgg
     1201 ggcagagtcg ctgaaggcat cgtcgagccg gcttcagcca taccggaagc ggttctccgg
     1261 gaggcggcgt accccgaaga tctcttccgg attcaggccc agcagctcga gcgcgacccc
     1321 tggaacgccg gtcttctcag tcgacgctcg gggcagggaa ccgccgcacc gacgacaccc
     1381 caggttg
//
LOCUS       DASRPQ010000466         1188 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4442137, whole genome shotgun sequence.
ACCESSION   DASRPQ010000466 DASRPQ010000000
VERSION     DASRPQ010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4442137"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            499..906
                     /locus_tag="VFD73_05555"
     CDS             499..906
                     /locus_tag="VFD73_05555"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HZI73483.1"
                     /translation="MTSPQDLHQYIHRAAVDAEGHRIGKISQVYLDDKTGQPLWLLVE
                     TGLFGTRQSFAPIHGSRCDGELVVLAVSKDQVKDAPNIDRDTQLSESEQDALRQHYSG
                     YLGTTAQASSYEESQQARQWESGQEPAFRRDEA"
BASE COUNT          237 a          396 c          383 g          172 t
ORIGIN      
        1 ggctatctgc accgcacaag atgggacggg cggccgctgc gggatcctgg tgacttgcga
       61 ccgtgatggc gacgaacctt ggttcatcca acgcgttgtt gcagtcgagt ctgcggcggt
      121 acctggagtg gactagcagg gatccagtca gcgagcaaac tgcagcctgt cggccccgcc
      181 cgatgcaacg gtcatctgcc catggttcct gcccagcgaa taacggcccc gcgaaagctc
      241 cagggcatga agaacagccc aggcggcccg tcaggtcaag ctccgcggcg cggcagaggg
      301 gaggtgcacc agtggatact catgcgagtt tgctggctac tggcgcgatc atgtgaacgg
      361 gcggcaaaga accaagtgcg ctcaacccgc cgcggagctg tttgttgctg tcctcccagg
      421 ggtaaagcga caagcttggc agctccgccg cgtggcccgg aggtgggcgt ctgcggcatc
      481 aggccaaagg aggtagctat gactagcccg caggatcttc atcaatacat ccatcgcgcc
      541 gccgtcgacg ccgagggcca caggatcggc aagatcagcc aggtgtacct cgatgacaag
      601 acagggcagc cactgtggct tctcgtggag accggcttgt ttggcacccg gcagagcttt
      661 gcgccgatcc acggatcccg gtgcgacggc gagctggtcg tgctggccgt gtccaaggac
      721 caggtcaaag acgcaccgaa catcgaccgg gacacccagc tcagtgaaag cgagcaagac
      781 gccctccgtc agcactacag cggctacctc ggcaccactg cgcaggccag cagttacgag
      841 gaaagccagc aggccaggca atgggagagc ggccaggagc ccgcattccg cagggacgag
      901 gcgtaatcca gctgctaaac cgggcgcacc gacacgtaat gtgcagaaag gcggaaccgg
      961 caagcatgca gcccagctcg ccgcctcgac cgccgcgcgg caggctccgg gctcaccggc
     1021 tcgggccagc ttccctaccg gcccggtcag cggctatctg ccaggaacac ccgacgtgcc
     1081 gcggatccag ccccaccggc acggtgcaat ccggccacca ccccggcatt cctcggcctg
     1141 ccagccagcc gcatccagcg tcagctggcg ctcttccggg tcggccag
//
LOCUS       DASRPQ010000467         1035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1942237, whole genome shotgun sequence.
ACCESSION   DASRPQ010000467 DASRPQ010000000
VERSION     DASRPQ010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1942237"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..521
                     /locus_tag="VFD73_05560"
     CDS             <1..521
                     /locus_tag="VFD73_05560"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZI73484.1"
                     /translation="IKRHFRDKCWPVHVNRSVKDLVFKARKATSQLTQDLGRAPTQSE
                     MARHLGVSGDDLRDAQRAEMASRPSSLDALLSGQTGTDTLADLLGEEDRAVEHMLSIR
                     AVAAHWGELPPREQKILLMRFHQDMTQAQIGQQLGISQMHVSRLSARALGHLRQRLLT
                     QHKHASAASPSA"
     gene            794..>1035
                     /locus_tag="VFD73_05565"
     CDS             794..>1035
                     /locus_tag="VFD73_05565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73485.1"
                     /translation="MTDGSDELHEDHRTAAFEAGGQFDLRQPPVAGALAAQVHECPIC
                     RVKRTYPRGEASLRRPQRHRPVAHPAGHPPPCCQLG"
BASE COUNT          190 a          383 c          313 g          149 t
ORIGIN      
        1 agatcaagcg gcacttccgg gacaagtgct ggccggtcca cgtcaaccgc tccgtgaaag
       61 atctggtctt taaggctcgc aaagcaacca gccagctaac ccaggacctg ggccgggcgc
      121 caacccagtc cgagatggcc aggcacctgg gggtcagcgg tgacgatctg cgggatgcac
      181 aacgagcaga aatggcctcc cggccatctt cgctggacgc gctgctgtcc ggccagaccg
      241 gcacggacac cctcgcggac ctcctcggcg aggaggaccg tgcagtggag cacatgctca
      301 gcatccgggc cgtcgctgcg cactggggcg agctgccccc tcgggagcag aagatcctgc
      361 tgatgcgctt tcaccaggac atgacccaag ctcagatcgg ccagcagctc ggcatctccc
      421 agatgcacgt ctcccggctg agcgcccgcg cgctcggcca cctccgccag cgcctgctca
      481 cccagcacaa acacgcatcc gcagctagcc ccagtgcata gcgcatccgc tcgcgcggga
      541 tccggcggtg caccccggcg acgtcttcga ggatcgcgtc gtacaggtct gtcccagcca
      601 tgcagaagac gtcaagcaga acaggccggt tggcggctct gaagatgtgg gcgtcgtcca
      661 agtcgcaccg gccccaccat ggggtcgact tccggtattc cgtatcgatc ctctgggctg
      721 cccggcttag ctcctggaac tccggatcgg ccgccctggt gcgccattgc tcggcgaacc
      781 gcttgacgac cggatgaccg acgggagcga cgaactccac gaagaccacc gaaccgccgc
      841 cttcgaggct ggcggccagt tcgatcttcg gcagccaccg gttgccggcg cactcgcggc
      901 acaggtccac gaatgcccaa tatgccgggt caaacggaca tacccgcgcg gcgaggcttc
      961 cctccggaga ccgcagcgcc accgcccagt cgcccacccc gcagggcacc cacccccctg
     1021 ctgccagctc ggcca
//
LOCUS       DASRPQ010000468         1011 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1307270, whole genome shotgun sequence.
ACCESSION   DASRPQ010000468 DASRPQ010000000
VERSION     DASRPQ010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1307270"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            317..>1011
                     /locus_tag="VFD73_05570"
     CDS             317..>1011
                     /locus_tag="VFD73_05570"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HZI73486.1"
                     /translation="MKSNNLWGRIVAVTALLLLVAGGSAFAQLQTGNLYGTVTDDKGA
                     ALPGVTVTLSGQGAPQVQVTNAQGQFRFLGLAPGSYDLKAELEGFSTIDYPNIVINIG
                     RNTQIEVKLSAAVEDVITVTAESPLLDERRISTGATVSQTELEKIPTARDPWAILQST
                     PGVLTDRINVGGNESGQQSVYTQEALNTLSFQRRQELGRQATLVRPASAPPGTEVESA
                     FEARWMGSDLVLLR"
BASE COUNT          182 a          326 c          321 g          182 t
ORIGIN      
        1 ggacgcatct ccatccaaat gcctggatcg gagacgggaa gtcccgcgag aggggtctgt
       61 aagcaccttg cttttcagaa gatagcaggc tctggccgcg cggggctccc cgggcacccc
      121 ctttgcttga cctggggttg acaagttggc tagagttcac gtcctcaagt tcgttccgac
      181 attgcgaaag gaggtgttgc gcggcacccg gtacgtcctt ttccaaccgg tactcccttg
      241 ctgttttctt tttgagccaa cgcgaagttt gcgacatttc tggctcaccc aaccaccaaa
      301 cgggaggttt atcgaaatga agagcaacaa cctttggggg cggatcgtgg ccgtgaccgc
      361 tctgctgttg ctggtcgcgg gcggcagcgc cttcgcccag ttgcagaccg gcaacctcta
      421 cggcaccgtc acagacgaca agggagcggc gctccctggg gtcaccgtga ccctttcggg
      481 gcagggtgcc ccgcaagtcc aggtgacgaa cgcccagggg cagttccgtt tcctgggtct
      541 cgcgcccggc agctatgacc tcaaggccga gctcgagggc ttctcgacca tcgattaccc
      601 gaacatcgtg atcaacatcg gccgcaacac ccagatcgag gtgaagctgt cggcggccgt
      661 cgaggacgtc atcaccgtca cggcggagag cccgctgctg gacgagcgcc ggatttccac
      721 cggtgccacg gtcagccaga ccgagctcga gaagatcccg accgcccgcg acccctgggc
      781 gattctccag tcgacgcccg gcgtgctgac cgaccgaatc aatgtcggcg gcaacgagag
      841 cgggcagcaa tccgtttata cgcaggaggc gctcaatacg ctctccttcc agcgccgcca
      901 ggagctcggc cggcaggcga cgctggtgcg gccggcgagc gcgccacccg gcaccgaggt
      961 ggagtcggcg ttcgaggccc gctggatggg cagtgatctg gtcctgctgc g
//
LOCUS       DASRPQ010000469         1514 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3197084, whole genome shotgun sequence.
ACCESSION   DASRPQ010000469 DASRPQ010000000
VERSION     DASRPQ010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3197084"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            229..741
                     /locus_tag="VFD73_05575"
     CDS             229..741
                     /locus_tag="VFD73_05575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73487.1"
                     /translation="MRPSPEMIPLLTDTARTLKASQRRLFMAKTVKAMGTGGQLWAEA
                     HLGWDRQTIRKGMHELRTGMTGVDAFHCRRRKPAEEHLPRLLDDIRSIADGQSQADPK
                     FQTERLFTRISAAEVRRQLIAVKGYTDAELPTQQTIDTKLNLLGYSLTRVAKCRPQKE
                     SRRPTPSSSR"
     gene            690..1442
                     /locus_tag="VFD73_05580"
     CDS             690..1442
                     /locus_tag="VFD73_05580"
                     /inference="COORDINATES: protein motif:HMM:NF019228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI73488.1"
                     /translation="MPPPKRVPQTDAIFEQVKRVNEQADSAGDTLRLSLDAKAMVNVG
                     PFSRRGRSRTGTKAADHDFKPEATLTPFGILLPEHDDLWLYMARSKVTSDFIVDRLEQ
                     WWEGVRLRFLRVKTLVVNLDNGPENHSRRSQFLKRVVAFARKYRLVVQLAYYPPYHSK
                     YNPIERCWGILELHWNGALLDSVEAVLGYAETMTWRGGHPEVVLVEAEYNEGVKSGRE
                     EMEALESVITRLPTLEKWFVSIPGGPKKRRAS"
BASE COUNT          296 a          482 c          502 g          234 t
ORIGIN      
        1 ggaagcagtc atcgaaccgc ttgaggaact ggcggagctt gggcttgagt ttgcggatct
       61 gcgggatgtc catgctcgtc cctccataaa ccatgaaggt gagcatagat tcgccacggc
      121 cgggagatca agccgctatg acttggcgct gtagtagtag gggtttgaaa ggagaaaacc
      181 gtcctgtatc ctgtgggctt cgcaccagga gccccaggag agatggagat gcgaccctcc
      241 cccgagatga tccctctcct gaccgacacc gccaggaccc tcaaggccag ccaacgacga
      301 ctcttcatgg ccaagacggt caaagccatg gggaccgggg gacagctctg ggcggaggcc
      361 catctcggct gggaccggca gacgatccgc aaggggatgc acgagttgcg caccggcatg
      421 accggcgtcg atgccttcca ctgccgccgc cgcaagcccg ccgaggagca cctgccccgg
      481 ctgctggacg atatccggag catcgctgac ggccagagcc aggccgaccc caagttccag
      541 accgagcggc tcttcacccg catcagtgcc gccgaggtcc gacgccagtt gatcgccgtc
      601 aagggctaca ccgacgccga gttgcccacc cagcagacca tcgacaccaa gctcaacctg
      661 ctcggctata gccttaccag ggtggccaag tgccgccccc aaaaagagtc ccgcagaccg
      721 acgccatctt cgagcaggta aagagggtca acgagcaggc ggactccgcc ggggacacgt
      781 tgcggctgtc gctcgacgcc aaggccatgg tcaacgtcgg gccgttctcc cgccggggcc
      841 ggagccgcac cgggaccaag gcggcggacc acgacttcaa gcccgaggcc acgttgacgc
      901 ccttcgggat cctcctgccc gagcacgatg acctctggct gtacatggcc cggtcgaagg
      961 tcaccagcga cttcatcgtg gaccggctgg agcagtggtg ggagggcgtc cgcctccgct
     1021 tcctgcgggt caagacgctg gtggtcaacc tggacaacgg cccggagaac cacagcaggc
     1081 ggagccagtt cctcaagcgg gtcgtggcgt tcgcccgcaa ataccgcctg gtggtgcaac
     1141 tggcgtacta cccgccgtac cacagcaagt acaacccgat cgagcggtgc tggggcatcc
     1201 tggagctgca ctggaacggg gcgttgttgg actcggtgga ggcagtgctg ggctacgccg
     1261 agacgatgac ctggaggggc gggcatcccg aggtcgtgct ggtcgaggcg gagtacaacg
     1321 agggcgtgaa gtcgggccgg gaggagatgg aggcgttgga gtcggtgatc acacgccttc
     1381 ccacactgga gaagtggttc gtgtccatcc cgggggggcc gaagaagaga cgggcgagtt
     1441 aactcctttc aaacccctaa ggggccttgg gtcgcccccg cttgccggtc cgaggcggcg
     1501 tgatcgtctc ccca
//
LOCUS       DASRPQ010000470         1589 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2247752, whole genome shotgun sequence.
ACCESSION   DASRPQ010000470 DASRPQ010000000
VERSION     DASRPQ010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2247752"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..631
                     /locus_tag="VFD73_05585"
     CDS             <1..631
                     /locus_tag="VFD73_05585"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HZI73489.1"
                     /translation="AVSAPEAPQDWDDILAPRWKDKVIIRDPMASGTMRAIWGLIIFR
                     SIRQTGDTTSGMRWLRALDGQTKTYTISPALLYEKLARQEGLVSLWDLQDILISQAKG
                     IPLGYVFPRSGTVVIDDAIGLVRGSRHPDVARAFIDYVGSTEAQLLTARKIFRLPART
                     DLPADSVPRWVAKVEHEMVVADVDWGMLSREGPAWMSYWDQHIRGTGRR"
     gene            656..>1589
                     /locus_tag="VFD73_05590"
     CDS             656..>1589
                     /locus_tag="VFD73_05590"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI73490.1"
                     /translation="MTFLRLENLTKRFDHTVAVEDLSLSLKRGEMLALLGPSGSGKTT
                     TLRLLAGFEVPDAGRVLVQDEDVTRLDPVARRFGMVFQHYALFPHLDVAENVGFGLES
                     LGVRGDALAARITRALALVDLAGFERRRIGQLSGGQQQRVALARALAPEPRVLLLDEP
                     LSNLDPALRERTRREIRDLIRRVGITTVFVTHEQDEAFDLGDRVALLRSGRLEQVGSP
                     EDLYAMPANKFVAEFIGRSTEIPVTVLGRSDRGIRIAVEGTEWDLTETASDGVAVGPA
                     LMVVRPEALRLSTPGNGAIQGTVRERRFTGFASLY"
BASE COUNT          282 a          491 c          522 g          294 t
ORIGIN      
        1 ggcagtctcc gcgcctgagg cgccccagga ttgggacgac atcctggcgc ctcgctggaa
       61 agacaaggtg atcatccgcg atcccatggc cagcggtaca atgcgggcga tctgggggct
      121 catcatcttt cgcagtatcc gccagaccgg tgacaccacc tcgggcatgc ggtggctccg
      181 ggcgctggat ggtcaaacca agacctacac gatcagcccg gcgctgctgt acgagaagct
      241 ggcccgacaa gagggattgg tgagtctctg ggacctgcag gacattctga tcagccaggc
      301 caaagggatt cctctgggct acgtctttcc ccgaagcggc accgtcgtga tcgatgatgc
      361 aatcggactg gtgcggggga gccgccatcc ggacgtcgct cgggcgttca tcgactacgt
      421 cggaagcacg gaagcccagc tccttacggc acgcaaaata ttccggctgc cggcacgaac
      481 cgatctcccc gccgactcgg ttccccggtg ggttgccaaa gtcgaacatg aaatggtcgt
      541 cgcggatgtc gactggggaa tgctgtcccg ggaagggccg gcctggatga gctactggga
      601 tcagcatatc cgcggcaccg gccggcgata gcatacccat caccacggga gccgcgtgac
      661 cttccttcgg ctggagaacc tcactaaacg gttcgaccac accgtggcgg tcgaggacct
      721 ttctctcagc ctcaagcgcg gtgagatgct ggcgctactc gggcccagcg gaagtggcaa
      781 gacgacaacg ttgcgactcc tggcgggatt cgaggtgcct gatgcggggc gggtgttggt
      841 ccaggacgaa gatgtcaccc gcctcgatcc ggtggcacgg cgcttcggca tggtattcca
      901 gcactacgcc ttgttcccgc atctcgatgt ggcggaaaac gtcgggttcg ggctcgagtc
      961 gctgggggtt cggggtgatg cacttgccgc tcggatcact cgcgccctcg ccctggtaga
     1021 ccttgcgggc ttcgagcgtc ggcggatcgg ccagctctcc ggaggccagc agcagcgggt
     1081 tgccctcgcg cgagccctgg cgccggagcc gcgagtgctt ctcctcgacg agccactctc
     1141 gaatctcgat ccggcacttc gagagcgaac tcggcgagaa atccgcgacc tcattcgccg
     1201 ggtcggaatc accaccgtgt tcgtgaccca cgagcaggac gaggccttcg acctgggaga
     1261 tcgggtggcc ttgctccggt ccggcagact cgagcaggtc ggatctcctg aagatctcta
     1321 cgccatgcct gccaacaaat tcgtggccga gttcattggt cgatccacgg agattccagt
     1381 gactgtgctc ggccggagcg atcgcggaat ccggattgcg gtggaaggca ctgagtggga
     1441 tctcactgag accgcctccg acggcgttgc ggtcggacct gctctgatgg tggttcgtcc
     1501 tgaggcgctg cggttgtcga ctcccggcaa tggagcaatc cagggaacgg tgcgggagcg
     1561 gcgctttacc ggattcgcca gcctgtaca
//
LOCUS       DASRPQ010000471         1532 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_370317, whole genome shotgun sequence.
ACCESSION   DASRPQ010000471 DASRPQ010000000
VERSION     DASRPQ010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_370317"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(215..856)
                     /locus_tag="VFD73_05595"
     CDS             complement(215..856)
                     /locus_tag="VFD73_05595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73491.1"
                     /translation="MPRGIPNIITNYDRNKEARKEAAAPLPEPELLGHIAGDAQVLNP
                     DPESQRESATWQSEDGTHVTLTEPPPPWEVGDDSGYSISDARRFVDVPKNWRLHWINP
                     KALSSEGWRDWQAVQTSDPRVTLKVPTMKSPEGYVRRGGAEGDILCWMWSGWYESKKR
                     LNEEAIRLQSQKAVEKQQDVAESMARGKYGPYIRPDAVRHPTHTNADGRSMRE"
     gene            complement(861..>1532)
                     /locus_tag="VFD73_05600"
     CDS             complement(861..>1532)
                     /locus_tag="VFD73_05600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73492.1"
                     /translation="MEQMLQYIAAQQQRAPQYAQPSFQAGQADSKEALWARAQQGDRE
                     AFEEYQRIIAREEYLKEQRTTGQKNYVEVQLTELSKLYPQLNDTSHPLTQKAQLAYQL
                     LVNSGKPADRGTLLEAAKTAIADSPQLIAEIYSQGSRAREQARTSGVRSAQSGMTGTT
                     YRQDAPRKEDKKPLTQAEMDLARRMGVKDPQGAKERFLKRQQSGQSAISHTLLPALDR
                     SLEDF"
BASE COUNT          216 a          483 c          501 g          332 t
ORIGIN      
        1 aacgccccgg tgatgacccg ggcggtgccg atcgtggtga tcatgacgca atcaccgatg
       61 ttgatgtcac tgccctcgct ggagctgacc aggtacggat tgcactggac cagcgtgccc
      121 tgcgaggcgg tcggcatgaa gccgaagtag ttattggtgg caggttgcag ataaggcaac
      181 gtggttgtcc tttgcgggga tcgagccctg ggggctactc ccgcatactt ctcccgtccg
      241 cgttcgtgtg cgtggggtgc cggactgcgt ccggacggat atatggccca tacttcccac
      301 gggccatact ctcagcgacg tcttgctgct tctcgacggc cttctggctc tggaggcgga
      361 tcgcttcctc gttcaaccgc ttcttggact cgtaccaccc agaccacatc cagcacagga
      421 tgtcaccctc agcaccccct cggcggacat agccctcggg ggacttcatc gtgggcacct
      481 tgagtgtgac gcgcgggtcg gacgtctgga cggcttgcca gtcgcgccag ccctcactcg
      541 acagcgcctt cggattgatc cagtgcagcc gccagttctt cgggacatcg acaaaacgcc
      601 tggcatcgct gatcgagtac ccgctgtcgt cgccgacctc ccagggggga gggggttccg
      661 tcagtgtgac gtgggtcccg tcttcgctct gccaggtggc actctcacgc tgggactcgg
      721 gatcggggtt gagaacttga gcatcgcccg cgatgtgccc caggagttct ggctccggga
      781 gcggggcagc ggcttccttg cgggcttcct tgtttcggtc gtagttcgtg atgatgttcg
      841 ggattccgcg gggcatggcg ttagaagtcc tccagtgaac ggtccagcgc cgggagcagg
      901 gtatgcgaga tcgcactctg cccactttgc tggcgcttca ggaagcgctc cttggccccc
      961 tgcgggtcct tcacacccat ccgcctcgcc agatccatct cggcctgggt cagcggcttc
     1021 ttgtcttcct tgcgtggggc atcctgccgg tacgtcgtgc ccgtcatccc ggactgggcc
     1081 gagcggactc cgctggtgcg agcctgctcg cgggcccggc tgccctggga atagatctcc
     1141 gcgatcaact gcggggaatc ggcgatcgcc gtcttggccg cctccagcag cgtgccccgg
     1201 tcagcgggct tgccactgtt gacgagcaac tggtaggcga gttgggcttt ctgggtcaac
     1261 gggtgggagg tgtcattgag ctgcgggtag agcttggaca actccgtcaa ctggacttcg
     1321 acgtagttct tctggccagt ggtccgctgc tccttgaggt actcctcgcg ggcaatgatc
     1381 cgctggtact cctcgaacgc ctcgcggtcc ccctgctggg cgcgtgccca gagggcttcc
     1441 ttggagtcgg cctggcctgc ctggaacgat ggctgggcgt actgcggggc ccgctgctgc
     1501 tgggccgcga tgtactggag catctgctcc at
//
LOCUS       DASRPQ010000472         2229 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1942688, whole genome shotgun sequence.
ACCESSION   DASRPQ010000472 DASRPQ010000000
VERSION     DASRPQ010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1942688"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..658
                     /locus_tag="VFD73_05605"
     CDS             <1..658
                     /locus_tag="VFD73_05605"
                     /inference="COORDINATES: protein motif:HMM:NF015563.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HZI73493.1"
                     /translation="TAPANGGRQMVVLVLVIVTFVVFVIGAKWLSWDFEQYSALFFLM
                     GVAAGLVGGLGFGGTAEGYVEGFRSMAFAGLLIGFARAIFIVLDEGHVVDTIVHGLLT
                     PIAALPVTLSAIGMMAFHGLVHLPVPSTSGQAVLTLPLLVPLSDLIGLSRQVTVLAYQ
                     YGAGLCELVTPTNGALMAMIAASGVRYEEWLRFVLPLVGALVALAAVALGAGVVTGLR
                     "
     gene            complement(651..1094)
                     /gene="trxA"
                     /locus_tag="VFD73_05610"
     CDS             complement(651..1094)
                     /gene="trxA"
                     /locus_tag="VFD73_05610"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HZI73494.1"
                     /translation="MPETVERRAVVRCVFCQTPNRVDLSKLALGPKCASCKRPILLDR
                     PLKATGADFDQTLEGTTVPVLVDFYADWCGPCHMMAPTVDDFARRHAGEALVLKLDTD
                     ANQAIAGRYGIRGIPTVIVFDHGKERGRHVGVVDLAKLESLAALT"
     gene            1243..1674
                     /locus_tag="VFD73_05615"
     CDS             1243..1674
                     /locus_tag="VFD73_05615"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI73495.1"
                     /translation="MSELTIREMEQDEDFSAWFSELLEQEEGLTGSGGLDEHYLILSN
                     EIGDWVGGLRYWLRGGVAHLVDVVVLPQERHKGHAHRLLSAFEERAAEAGGHVAEFWT
                     DDERSEGLLGALGWQRIFQREDYIGHKRWSLMEKHLGTDAG"
     gene            1771..>2229
                     /locus_tag="VFD73_05620"
     CDS             1771..>2229
                     /locus_tag="VFD73_05620"
                     /EC_number="1.14.19.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045300 - acyl-[acyl-carrier-protein]
                     desaturase activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP desaturase"
                     /protein_id="HZI73496.1"
                     /translation="MGIAPDPASELALKIEVLRDLEEPVRELMETHERKRDVWLPSEL
                     LEPQPESCPDEFVRKLREQAKSIPDPIRAALALNMLTEEGLPHFHRLLAVYLGDDSHW
                     RRWNNLWTAEEDRHGAVLHDYARDTRLFDARKIEEMQFEYIRAGFHPEWDK"
BASE COUNT          362 a          686 c          784 g          397 t
ORIGIN      
        1 gaccgctccc gcgaatggcg gacgccagat ggtggtgctg gtcctggtga tcgtcacctt
       61 cgtcgtgttc gtgatcggcg cgaagtggct ctcctgggac ttcgaacagt actccgcgct
      121 cttcttcctc atgggggtgg ctgccggcct ggtcggcggg ctcggcttcg gcggcacggc
      181 cgaggggtat gtcgaaggat tccgctcgat ggccttcgcg ggcctgctga tcgggttcgc
      241 ccgcgcgatc ttcatcgtgc tcgatgaggg tcacgtggtc gacacgatcg tccacgggct
      301 gctcacgccc attgccgcgc ttcccgtcac cctgtcggcc atcggcatga tggcgttcca
      361 cgggctggtt catctgccgg tgccgagcac gagcggccag gcggtgctca ccctgccgct
      421 cctggtgccg ttgtccgatc tcatcggact gtcgcggcag gtgacagtgc tggcctacca
      481 gtacggggca gggttgtgcg agctggtgac ccccaccaac ggcgcgctga tggcgatgat
      541 cgccgcgagc ggggtgcgct acgaggagtg gctccggttc gtgctgcccc tcgtcggcgc
      601 cctggtggcg ctggcggcgg tggccctggg ggcaggcgtc gtcaccgggc tcaggtaagg
      661 gcggccagcg actcgagctt ggcgagatcc actaccccga cgtgccggcc ccgctctttg
      721 ccgtggtcga acacgatcac cgtcggaatg ccgcggatgc cgtaccgccc ggcgatggcc
      781 tggttggcgt cggtgtcgag cttgagcacc agggcctcgc ccgcgtgccg ccgggcgaag
      841 tcatccacgg tcggggccat catgtggcag gggccgcacc agtcggcata gaaatccacc
      901 aggacgggta cggtcgtacc ctcgagcgtc tggtcgaaat ccgcgccggt cgccttgagc
      961 gggcggtcca gcaggatcgg gcgcttacag ctggcgcact tgggaccgag ggccagcttc
     1021 gagaggtcca cccggttggg cgtttgacag aacacacagc gtaccacggc gcgtcgctcg
     1081 acggtttccg gcatacgtcc tcctctagcc gagcaaggta gggtgccctg cgatcagggc
     1141 acaagcacgg ggccctcgac ccagtgacca tgttcacaga caggaacacg ccggttggca
     1201 ttactgttgc aatagcgtga ggaatccctg gaaggtggaa ccatgagcga gctcaccatt
     1261 cgagaaatgg aacaggacga ggacttctcg gcctggtttt cggagctgct cgagcaggag
     1321 gaggggctca ccggctccgg cggcctcgat gagcattacc tcattctcag caacgagatc
     1381 ggggactggg tggggggtct gcgctactgg ctgcggggcg gggtggccca cctggtcgac
     1441 gtggtagtcc tgccgcagga gcggcacaaa ggccacgccc accggctgct gtcggccttc
     1501 gaggagcgtg cggccgaggc aggcgggcat gtggccgaat tctggactga tgatgagcgg
     1561 tcggagggcc tgctcggggc cctgggctgg caacgtatct tccagcgcga ggactacata
     1621 gggcacaagc gctggtccct catggagaag cacctgggga ccgacgccgg ttagtcgtct
     1681 ctccgttggc gctggcacga ccagtcactg tatctttggt ggctggtcgt tttgtcattt
     1741 caggggtttg actgcaacaa aaggaaacgc atggggatcg ccccggatcc ggcgagcgag
     1801 ctcgcgctga aaattgaagt gctgcgggac ctcgaggagc cggtgcgcga actcatggaa
     1861 acccacgagc gcaagcggga tgtatggctt ccctcggagc tcctggagcc gcaacccgag
     1921 agctgcccgg acgagttcgt gcggaagctc cgggagcagg ccaagtccat cccggatccc
     1981 attcgtgccg cgctggcgct caacatgctc accgaagaag gcctcccgca cttccaccgt
     2041 ctcctggccg tgtacctggg cgatgacagc cactggcgga ggtggaacaa cctgtggacg
     2101 gcggaggagg atcggcacgg cgcggtgctc cacgattacg cgcgggacac ccggctgttc
     2161 gacgcacgga agatcgagga gatgcagttc gagtacatcc gggccgggtt ccacccagag
     2221 tgggacaag
//
LOCUS       DASRPQ010000473         1098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1943095, whole genome shotgun sequence.
ACCESSION   DASRPQ010000473 DASRPQ010000000
VERSION     DASRPQ010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1943095"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(168..455)
                     /locus_tag="VFD73_05625"
     CDS             complement(168..455)
                     /locus_tag="VFD73_05625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73497.1"
                     /translation="MTLFPALDPLSRPHVLEVWPVGVVEEADAVSKGHEGKDLPYELA
                     EFDFTELFKAVPLEHFHFSQRRAIFEIGWKESGRDLELRVHLEPDGMSEET"
     gene            complement(557..>1098)
                     /locus_tag="VFD73_05630"
     CDS             complement(557..>1098)
                     /locus_tag="VFD73_05630"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI73498.1"
                     /translation="AELPPDETVVWEDEADINTNPEIGRMWMRRNQQAEIPTPGTNRK
                     RYVAGSIHWRTGMVFATEGPKRDEKLFLAHLDELRRRLRRYRKIHVICDCAKFHHSDA
                     VQVYLYEHRDRIELEMLPKYSPDANPMERVWWLVREHITRNHRCHDSAELMEMVMRYL
                     ESEAPFRLEDEEYKIPLAA"
BASE COUNT          192 a          365 c          333 g          208 t
ORIGIN      
        1 gatcggcttg ggcagcgccc ggaagtcgac ctcccaggtc tcgtcccgct gggacaggcg
       61 tttcaggcgg cccttgtcga acgccgcccc cttgccaagc ttcagcttct cctcctcggg
      121 cacggctgtt tcccccaaat ctcagtccag atgaccaccc tcgatgatca ggtctcctcg
      181 ctcatcccgt ccggctccag gtggacccgg agttccaggt cccgcccgga ctccttccag
      241 ccaatctcga agatcgcccg ccgctggctg aaatggaagt gctccagcgg caccgccttg
      301 aacaactccg tgaaatcgaa ctcggccaat tcgtagggga ggtccttccc ctcgtgacct
      361 ttcgacaccg catcggcctc ctccaccacg cccacaggcc agacctccag gacgtggggg
      421 cgggaaagag ggtcaagggc gggaaagagg gtcaagggcg ggaaagaggg tcaggcggga
      481 aagagggtca ggcgggaaag agggtcagga gccttttttg gacgcctaaa taggtccacg
      541 caaaggggaa agtatgtcaa gcggccagag ggatcttgta ttcctcatcc tcaagccgga
      601 agggtgcttc cgactccagg tatcgcatga ccatctccat taattccgct gagtcatgac
      661 accgatggtt ccgcgtgatg tgctcccgca ccagccacca gacccgctcc atcgggttgg
      721 cgtccgggct gtacttcggc agcatctcca gctcgatccg gtcgcggtgc tcgtacaggt
      781 agacctgcac cgcgtcgctg tggtggaact tggcgcaatc gcagatcacg tggatcttgc
      841 gataccgtcg cagccgccgc cggagctcgt ccaggtgggc caggaacaac ttctcatccc
      901 gcttcggtcc ctcggtggcg aagaccatcc cggtccgcca gtggatcgag ccggccacgt
      961 accgcttccg gttggtcccc ggggtgggga tctcggcctg ctggttgcgc cgcatccaca
     1021 tccggccgat ctccgggttg gtgttgatgt cggcctcgtc ctcccagacg accgtctcgt
     1081 cgggcggcag ctcggcca
//
LOCUS       DASRPQ010000474         1509 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4442832, whole genome shotgun sequence.
ACCESSION   DASRPQ010000474 DASRPQ010000000
VERSION     DASRPQ010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4442832"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..321
                     /locus_tag="VFD73_05635"
     CDS             <1..321
                     /locus_tag="VFD73_05635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73499.1"
                     /translation="HARSGDKGDTANVGLIALEPEYYSLLEQEVTAARVARHFKGMVS
                     GVDRFELPNLNALNFLLHGALGGGGTISLKTDAQGKVYSTALLRMEIPVPAPLARRLR
                     PKDQ"
     gene            318..1076
                     /locus_tag="VFD73_05640"
     CDS             318..1076
                     /locus_tag="VFD73_05640"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HZI73500.1"
                     /translation="MTSLLLTSREQGVLSLTLNRPEKRNALSSDLIDQLHEAFEHADL
                     DGDVRVVLLRGAGKDFCAGADLDELLASADRPLAENEAAALRLGMLFRRIRELPKPVI
                     AMVHGRALAGGAGLASACDLVIAGSGAQIGYPEIQRGFAPAMVMALLRRLVTEKLALD
                     LVLTGRVLSAEEARSAGLVSRVTADSELERDTLSLARQLAGASTTALGITKQLFYELD
                     SRSLADGIALGARVNAVARSTPDFRQAIAAFLKQ"
     gene            1136..1261
                     /locus_tag="VFD73_05645"
     CDS             1136..1261
                     /locus_tag="VFD73_05645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73501.1"
                     /translation="MLSIAFDNRTFGWLAIAALAVAVLVRLITRSRVAAEGDEQV"
BASE COUNT          272 a          462 c          497 g          278 t
ORIGIN      
        1 cacgcgcgct cgggtgacaa gggcgatacc gccaacgtcg ggctcatcgc tctggagccg
       61 gagtactact cgctgctgga gcaggaggtc accgcggctc gggttgcccg gcacttcaag
      121 gggatggtca gcggcgtgga ccgattcgag ctgcccaacc tgaacgcgct gaacttcctg
      181 ctgcacggtg cactgggagg gggtggaacc atctcactca agactgacgc gcaggggaaa
      241 gtgtattcca ccgcgctact ccggatggaa attccagttc ccgctccact cgcccgccgc
      301 ttgcgaccca aggaccaatg acatcgctgc ttctgacctc acgagagcag ggcgtgttga
      361 gccttacgct caaccggccc gagaagcgca acgccctgag cagcgacctg atcgaccagc
      421 tgcacgaggc attcgagcac gccgatctcg atggcgatgt tcgagtcgtc cttctccgcg
      481 gagcagggaa ggacttctgt gccggcgccg acctcgacga gctgctcgcg tccgccgatc
      541 gcccgctggc ggagaacgag gcagccgcgc tgcggctggg gatgctgttt cggcgaattc
      601 gcgagctgcc caagccggtg atcgccatgg tgcacggccg ggccctcgcg ggaggcgcag
      661 gactggccag cgcctgtgat ctggtaattg ccgggagcgg agctcagatc ggctatccgg
      721 agatccagcg gggcttcgcc cccgctatgg tgatggcctt gctgcgccgg ctggtaacgg
      781 aaaaactggc actcgatctg gtgctcaccg gccgagtgct cagcgccgag gaagccagaa
      841 gtgcgggcct ggtcagtcga gtgacggcag atagtgagct cgagcgagac actttgtccc
      901 tggcccggca gttggcaggc gccagcacaa ccgctctcgg gatcaccaag cagctgttct
      961 acgagctcga cagccgaagt ttggcggacg gcatagcgct cggtgcccgg gtcaatgccg
     1021 tagcgcgtag tactccggac tttcgccagg caatcgcggc attcctcaaa cagtgactcg
     1081 tccttcctta cttacgattc gacttgggct cgcgcttctg ggctttgcgc tcgcggtgct
     1141 gagcattgcc ttcgacaatc gaacctttgg ctggctggcg attgctgcac tggcggtagc
     1201 cgtgcttgtg cgcctgatca caaggtcccg ggtcgccgcc gagggggacg aacaggtgtg
     1261 acgcctatca cgggtagcca caatctatgt acgctacttt gccgcgtcag atgggcgtca
     1321 tcactgcgac aggaggaaat atgagaggtc tctcaaaggg tatagcagcg ctcaccgcgg
     1381 gcatgctgct gagtgctccc gcgctccgtg cgcagggtgc ggagttcacc ctcggaggtg
     1441 gaataggaat tccaacgggc aacttcgaca acgccgtgaa tacgggctgg aacgggctcg
     1501 cgggcgttt
//
LOCUS       DASRPQ010000475         1518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1308500, whole genome shotgun sequence.
ACCESSION   DASRPQ010000475 DASRPQ010000000
VERSION     DASRPQ010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1308500"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..535)
                     /locus_tag="VFD73_05650"
     CDS             complement(<1..535)
                     /locus_tag="VFD73_05650"
                     /inference="COORDINATES: protein motif:HMM:NF014428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HZI73502.1"
                     /translation="MIKTAGWCLAAALAVSACGGDTNVQQPVVPSSIEAVQGQGQSGL
                     VGSALPTPLGVKVTDGSGNPAPGVTITWSVVSGGGTVSPAASVTDANGVTSTQYTLGP
                     AEGEQQAEATGTGLTGSPVVFTETATTSPGPVPTVLSVAAGGNNVPDRYSSDLWVHGN
                     YAYTGTWGSIPRQEDKAG"
     gene            complement(528..>1518)
                     /locus_tag="VFD73_05655"
     CDS             complement(528..>1518)
                     /locus_tag="VFD73_05655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73503.1"
                     /translation="GELAPGDWGEGFVDRRHPHTYVHEAILSYQQQLVFGAEPVELSL
                     SAGKGFAPFGTDDPMSRPALRYPVNHHLAQILERAVAILGVRAGPVLLEGGLFNGDEP
                     ERPSQWPKISRFGDSWSLRATVVPVRSLELQGSHAAVHSPEHRPGFGLDQRKWSASGR
                     WTGMLRRSPVYGLVEWERTSEADGFFVYHSLLGEGAWSPGHNRLYYRVERTDRPEEER
                     GLRRFRSTRPIQENAILGTTRWTIQTAGYGRQFAIWRSLTALPFVEASYGRVASTGGG
                     LFDPESFYGKTSFWSLTLGARLSIGMTMHRMGRYGVAQNTAPAMDMAHHMDHD"
BASE COUNT          268 a          506 c          477 g          267 t
ORIGIN      
        1 cacctgcctt gtcctcctgg cgagggatcg agccccaggt gccggtatat gcgtaattcc
       61 cgtgcaccca gagatccgag ctgtagcgat cgggcacgtt gtttcctccc gctgccacgc
      121 tcaataccgt tggtaccggg cccggactgg tcgttgccgt ctcggtaaaa acgaccggag
      181 atccggtgag tccggtcccg gtcgcttcgg cctgctgctc tccctcggcg ggccccaagg
      241 tgtactgggt agaggttacg ccattcgcat cggtaacgga tgcagcggga gataccgttc
      301 cgccgccgct cacgaccgac caggtgatgg tgacgcccgg agcggggtta cccgagccat
      361 cggtgacctt gacgccgagt ggggttggaa gagcgcttcc gacgagaccg gattgaccct
      421 ggccctgaac cgcctcgatg gaggagggga cgaccggttg ctgcacgttc gtgtccccgc
      481 cgcaggccga aaccgccaag gcggccgcca ggcaccaccc agctgtttta atcatggtcc
      541 atatggtgtg ccatatccat cgcgggcgcg gtgttctgtg ccacaccgta ccgtcccatc
      601 cggtgcattg tcatgcctat gctgagccgt gcaccgagcg tgagcgacca gaacgaagtc
      661 tttccgtaaa acgactccgg atcgaagagg ccaccgccgg tgctggcaac ccggccgtag
      721 gaggcttcca cgaatggaag tgcggtgagg ctccgccaga tcgcaaactg ccgtccgtac
      781 ccggcggtct gaatcgtcca gcgagtagtg cccaggatgg cgttttcctg aatgggccgg
      841 gtcgaacgaa agcggcgcaa ccctcgctct tcctccggcc gatcggtgcg ctcaactcga
      901 tagtaaagac gattgtgacc gggactccat gcaccttcgc ccaagaggct atggtacacg
      961 aagaaaccgt cggcctcgga ggtgcgctcc cattccacca gtccgtacac cggtgaccgg
     1021 cgcagcattc ccgtccatcg acccgatgcg ctccatttcc gctgatccag tccgaagccg
     1081 ggccgatgct ccggcgaatg caccgccgcg tgcgagccct gaagctccaa ggaccgcacc
     1141 ggcacgacgg ttgcccggag cgaccacgag tcgccgaacc ggctgatctt gggccactgg
     1201 ctcgggcgtt cgggctcgtc tccgttgaag agccctccct ccagcagcac gggaccggcc
     1261 cgcactccca gaatcgccac tgctcgctcc aggatctggg ccagatggtg gttgacggga
     1321 tagcgcaggg ccggccggct catcgggtcg tcggtgccga agggtgcgaa gccctttccg
     1381 gccgagagtg agagctccac tggctcagca ccgaagacca gctgctgttg atacgagagg
     1441 atcgcctcgt ggacgtaggt gtgggggtgc cgccgatcca cgaacccctc gccccaatcg
     1501 ccgggcgcaa gctctcca
//
LOCUS       DASRPQ010000476         1015 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4443290, whole genome shotgun sequence.
ACCESSION   DASRPQ010000476 DASRPQ010000000
VERSION     DASRPQ010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4443290"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1015
                     /gene="murD"
                     /locus_tag="VFD73_05660"
     CDS             <1..>1015
                     /gene="murD"
                     /locus_tag="VFD73_05660"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HZI73504.1"
                     /translation="AERSLSALGATVQLGVQTAPESPFDLVVVSPGVAWENPILAEMT
                     ARKTPIIGELELGYQHSLCLNIAITGTNGKTTTTELVERMLTAHHIRTLAAGNIGVPV
                     CSVLERTKELDFLTLEVSSFQLETIRYFRPAVGVLLNITPDHMDRYAGMDDYALAKAR
                     LFANQQPFDWAIIQSEALAQLRALKANIPSKVITFSAVNRRADIHLDRGLILSQIEGW
                     TGPLMDMSRSKLVGPHNAENFMAALAVGRVLRIPLETIVEALSTYQPAAHRCEFIAEI
                     NGVKFVNDSKATNLDAVQKALVSMPQPRAGEPNIWLIAGGRDKAFQYYEIGPLLSQRV
                     KGAF"
BASE COUNT          191 a          317 c          324 g          183 t
ORIGIN      
        1 ggccgagcgt agcctgtcgg cgctgggcgc caccgtccag ctgggcgtgc agaccgcgcc
       61 ggagagcccg tttgatctgg tcgtggtcag ccccggcgtg gcgtgggaga atccgatcct
      121 ggcggagatg accgcgcgca agaccccgat catcggcgag ctggagctgg gctaccaaca
      181 ttcgctgtgc ctgaacatcg ccatcaccgg caccaacggc aagacgacca ccaccgagct
      241 ggtcgagcgg atgctgacgg cgcaccacat ccgcaccctg gccgccggca acatcggcgt
      301 cccggtctgt tccgtactgg aacggaccaa agagctggat ttcctgaccc tggaggtcag
      361 ctcgtttcag ctggagacca tccggtattt tcgcccggcc gtgggcgtgc tcctcaacat
      421 cacgccggac cacatggacc gttatgccgg catggacgat tacgccctgg ccaaggcgcg
      481 cctgtttgcc aaccagcagc ccttcgattg ggcaataatt cagagcgagg cgctggcgca
      541 attaagggcg ttgaaggcga acatcccctc gaaggtgatc accttcagcg cggttaaccg
      601 ccgcgctgac atccacttgg accgtggatt gatcctcagc cagattgagg gttggacggg
      661 tcccctgatg gacatgagcc gttcgaagct ggtcggtccg cataatgctg agaatttcat
      721 ggcggccctg gcggtcgggc gggtcctgcg gattccgctc gagaccatcg tcgaggcgct
      781 gagcacctac cagccagccg cccatcgctg cgagtttatc gcagaaatta atggcgtgaa
      841 gtttgtcaac gactcgaagg ccacgaacct ggacgcggtg caaaaggcgc tggtgtccat
      901 gcctcagccg cgggcggggg agccgaacat ctggctcatc gccggcggcc gggacaaggc
      961 ttttcaatac tacgagatcg gcccgcttct gtcccaacgg gtgaaggggg cgttt
//
LOCUS       DASRPQ010000477         1117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1943806, whole genome shotgun sequence.
ACCESSION   DASRPQ010000477 DASRPQ010000000
VERSION     DASRPQ010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1943806"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(449..>1117)
                     /locus_tag="VFD73_05665"
     CDS             complement(449..>1117)
                     /locus_tag="VFD73_05665"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZI73505.1"
                     /translation="VTSWPLFGNPFPTNYGNALNIVAKRGWAFQQHSLSLAEDQFTAT
                     AFEAVNQTIPIADLRWSVAHVPQIDQPTVSRLKAIGAGIAVHPFRYLSGGNAGGPPLR
                     MILDSGIHVGAGSDSAQISTLDPWNMIYYMVTGKNAAGKLVNPGQQITREEAIRLYTV
                     ANGWFLKEEDKLGSLEPGKFGDVVVLSDDYFNSSRVPDESIRKLHSVLTVVDGKVVHD
                     LLSR"
BASE COUNT          213 a          332 c          360 g          212 t
ORIGIN      
        1 cgcggcatac gcagcgctct catgcgtggc ccgcaggaca acaccactcg gggctgcgga
       61 tctcggtacg ccagtagggt aattcggaga tgaggagcct atccgcttct tgcagatgcc
      121 tgaccgcacc tttggagcgg cggggtatta ggcagccggg agtggacgag agggtaacaa
      181 ctggctgagg ccctcctgtc cgaagacatc gtccccgcac gctggatagc acggcgcgat
      241 cacgtcgcgg gcccgagaaa cgggccctgg tgatctcttg ggagaccacc ggggctcgtc
      301 atatcgctgg gccatgagat tctccgaggc ccacgcaacg gagatacacc atagagcgca
      361 ttggcggtcg gcaccgctta tttgcacaga cggtagacac gctgccgcct gacacgagcc
      421 gctcgatatt tgcgcttgcc ggcggccatt accggctcag cagatcatgg acaacctttc
      481 cgtccacgac tgtcaggacg gaatggagct tcctgatcga ctcgtcgggg acgcggctcg
      541 aattgaaata gtcgtcgctg agcacgacga catctccgaa tttacccggc tcgagcgagc
      601 cgagtttgtc ctcctccttg aggaaccagc cgttggcaac ggtgtagagt cggatggctt
      661 cttcacgcgt gatctgctga ccggggttca ccagctttcc ggcggcattc ttaccggtga
      721 ccatgtagta gatcatgttc cagggatcca acgtcgagat ctgggccgaa tctgatccgg
      781 cgccgacatg gatgccgctg tcgaggatca tgcgcagcgg gggcccgccg gcattcccgc
      841 cgctcagata ccggaatgga tgcaccgcaa tgccggctcc aatggctttg aggcgagaca
      901 ccgtcggctg gtcgatctgc gggacgtggg cgacggacca gcgcaggtcc gcgatcggaa
      961 tggtctggtt taccgcctcg aatgcggtgg cggtgaactg gtcctcggcg agagacaggc
     1021 tgtgctgctg aaacgcccag ccccgcttcg cgacgatatt gagcgcgttg ccatagttgg
     1081 tcggaaacgg attgccgaac agcggccagc tggtgac
//
LOCUS       DASRPQ010000478         1773 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3501720, whole genome shotgun sequence.
ACCESSION   DASRPQ010000478 DASRPQ010000000
VERSION     DASRPQ010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1773
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3501720"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            75..383
                     /locus_tag="VFD73_05670"
     CDS             75..383
                     /locus_tag="VFD73_05670"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HZI73506.1"
                     /translation="MKSDSQIREEVIQELRWDPQVTDPDVVGVAVKDGALTLQAEIEE
                     AFKREAEIDARHISVAVSDHTASLYGHVHSLNEANAARAAAASAPGIASVESHLVVTP
                     "
     gene            417..1328
                     /locus_tag="VFD73_05675"
     CDS             417..1328
                     /locus_tag="VFD73_05675"
                     /inference="COORDINATES: protein motif:HMM:TIGR03709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006797 - polyphosphate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PPK2 family polyphosphate kinase"
                     /protein_id="HZI73507.1"
                     /translation="MDKGLRFIADLIEPLRVAPGSTVKLSRDHDPGYTGQVTRPQATA
                     LLADGVRLLAKYQDRLAAQDTFGVLLVLQGLDASGKDSTIKHTMSCVNPQAVAVRAFK
                     QPSAEELNHDFLWRYQCALPERGRIGIFNRSHYEEVLVVRVHQDLLAAQRLPAAATKG
                     DVWDRRYREINDWERYLVDNGIHVVKIMLNVSKRKQAKRFIKRIDHPAKNWKFSPSDV
                     RERRHWDDYQRAFDSMLSHTSTQWAPWYVVPADHRWFSHLASAGVLVTALNAINPRYP
                     TADPAERDHMAQVRAELAADLAAAQPG"
     gene            complement(1486..>1773)
                     /locus_tag="VFD73_05680"
     CDS             complement(1486..>1773)
                     /locus_tag="VFD73_05680"
                     /inference="COORDINATES: protein motif:HMM:NF014520.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WhiB family transcriptional regulator"
                     /protein_id="HZI73508.1"
                     /translation="DPDEWFPLTADVRRAREQAARAIAVCAGCPVRADCLELSLRHSS
                     GIGAYGVWGGLVAEERRALRRRRLRECSVAEDSAAQLPGRSLTLVTEARDL"
BASE COUNT          347 a          602 c          558 g          266 t
ORIGIN      
        1 agcgtgtgat gtggaggccg ggcccctcgg cctatcgtcg caagccggta tgcacgtctg
       61 tcaggaggta gccgatgaaa tccgacagcc agatcaggga agaagtcatc caggagctgc
      121 ggtgggaccc gcaggtgacc gatcctgacg ttgtcggcgt cgccgtcaag gacggggcgc
      181 taaccctgca ggccgagatc gaagaagcct tcaagcgcga ggccgagata gacgcccgtc
      241 acatcagcgt ggccgtctcc gaccacaccg cgagtctcta cgggcacgtc cactcactga
      301 acgaagcgaa cgccgcaagg gcagcggccg cgtcagcgcc aggcattgcc agcgtagaga
      361 gtcatttggt cgtcacaccg tgaccctagc gacgttggga tgggcattat taggggatgg
      421 acaagggtct tcgcttcatt gccgacctca tcgaaccgct gcgggtagcg ccagggagca
      481 cggtcaagct gagccgggac cacgatccgg gctacaccgg ccaggtgacg cggccgcaag
      541 ccaccgcact gctcgccgat ggcgtaaggc ttctcgccaa gtaccaggac cggctcgccg
      601 cccaggacac cttcggcgtg ctgctggtcc tccagggact ggacgcctca ggcaaggaca
      661 gcaccattaa gcacacgatg agctgtgtca acccgcaggc ggtcgccgtc cgtgccttca
      721 agcagccctc cgccgaagaa ctgaaccacg acttcctctg gcgttaccaa tgcgccctgc
      781 ccgagcgggg caggatcggc atcttcaacc ggtcccacta cgaggaggtg ctcgtcgtcc
      841 gggtgcatca agacctgctc gccgcgcagc gactgcccgc agcggcaacg aaaggcgacg
      901 tctgggaccg ccggtaccgg gagatcaatg actgggagcg ctacctggtc gacaacggca
      961 tccatgtcgt caagatcatg ctcaacgtgt cgaagagaaa gcaggccaaa cggttcatca
     1021 agcgcatcga ccacccggca aagaactgga agttctcgcc cagcgacgtc agggaacggc
     1081 gccactggga cgactaccag cgcgccttcg acagcatgct gagtcatacc agcacgcaat
     1141 gggcaccgtg gtacgtcgtg ccggccgacc ataggtggtt cagccacctg gcatccgctg
     1201 gggtcctcgt gacagcgctc aacgccatca acccgaggta cccgaccgct gatcccgcag
     1261 agagggatca catggcgcag gtcagggccg agcttgcagc agatctggct gccgcgcagc
     1321 ccggctgagt gcaccccgcg caggcatcct gagatccttt tatcccggcg agtatcccgg
     1381 agccgaggtc gatgctggcg gccgcgatgt ctccggtttg ccggtcccac ggtgccacgc
     1441 tggcaaccgg caacgtctcc gacttcgacg gcccctgcat cgagatcata gatccctggc
     1501 ttcagtcact agagtgaggg accggccggg cagctgcgcc gcactgtctt cagcgactga
     1561 acactcccgc agccgacggc gccgcagcgc ccggcgttcc tcggcgacca ggccgcccca
     1621 cactccgtat gccccgatgc cggaagagtg ccggagcgag agctccaggc agtccgcccg
     1681 gaccgggcac ccagcacaga ccgcgatggc ccgggcggcc tgttcccgcg cccgccttac
     1741 gtccgcggtg agcgggaacc actcgtccgg atc
//
LOCUS       DASRPQ010000479         1140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1622726, whole genome shotgun sequence.
ACCESSION   DASRPQ010000479 DASRPQ010000000
VERSION     DASRPQ010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1140
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1622726"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1140
                     /locus_tag="VFD73_05685"
     CDS             <1..>1140
                     /locus_tag="VFD73_05685"
                     /inference="COORDINATES: protein motif:HMM:NF013239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIM-barrel domain-containing protein"
                     /protein_id="HZI73509.1"
                     /translation="IDDSPTPVWNAQKAWIEPRPQPTGQDWYLFSYNRDYRKVLAQYA
                     QLCGPIPMIPRWVLGPWITDFNFEYFPGSGDSRRPDFQRYNQQYLVDEVSRLRRSQIP
                     LDVLVLDFAWHNYGWEGGYDWSPLIPHPQELVDRLHGQGIKLSLNDHPGYVHTEQSIL
                     SFDDSHAPQVLRALGRSLPPKPTFDMDLSPLWSFRTDPRDEGVEHHWYATEQDQGGWK
                     PIRIGPWEEQGYATYRGAGWYRARVELPSKLPDALYLYLGEVSKAYRIFVNGSEVTHS
                     EAHWPRRLTYTDIARYVKAGHRNEIVLRVEAGERSRDGLIRGPVAIRNVEPPRRIYFD
                     LSNQQQADVFMRELHGPLMRQGVDVWWVDGGNGAVDMPGLNPQLWT"
BASE COUNT          215 a          369 c          362 g          194 t
ORIGIN      
        1 atcgacgaca gcccgacgcc cgtgtggaac gcccagaaag cgtggatcga gccgcgcccg
       61 cagccgacag gtcaggactg gtatctgttc agctacaacc gcgactaccg caaagtactc
      121 gcccaatacg cgcagctctg cggacccatc ccgatgattc cgcgctgggt gctcggcccc
      181 tggatcaccg atttcaattt cgaatacttt cccggcagcg gggactcccg gcggcccgac
      241 ttccagcgct ataaccagca gtacctcgtg gatgaggttt cacggctgcg ccggagtcag
      301 attcccctcg acgtgctggt gctggacttc gcctggcaca actacggctg ggagggcggc
      361 tacgactgga gtccgctgat cccgcatccg caggagctcg tggaccggct gcacggccag
      421 ggcatcaagc tgagcctcaa cgatcacccg ggctatgtcc atacggaaca aagcatcctg
      481 tcgttcgatg acagccacgc gccgcaggtg ttgcgagcgc tcggccgctc gttgcctccg
      541 aagcccacct tcgacatgga tttgtcacca ctgtggagct ttcgcaccga tccccgcgac
      601 gaaggagtgg agcatcactg gtacgcgacc gaacaggatc agggtggctg gaagccgatc
      661 cgcatcgggc cctgggagga acagggctac gcgacttacc gtggggcagg gtggtatcgg
      721 gcccgagtgg agctgccctc gaaactcccc gacgcgctgt atctgtatct cggtgaagtc
      781 agcaaggcct accggatctt cgtcaacggc agcgaagtga cccatagtga agcgcactgg
      841 ccgcggcgat tgacctacac cgacatcgct cgctacgtca aagcgggcca ccggaacgag
      901 atcgtcctgc gtgttgaggc gggcgagcgc agccgcgacg gcctgatccg cgggccggtc
      961 gcgatccgca atgtcgagcc gccgaggcgt atctatttcg atctctcgaa ccagcagcag
     1021 gccgatgtct tcatgcgcga gctgcacggg ccgctgatgc gccagggcgt ggacgtgtgg
     1081 tgggtcgatg gcggcaacgg cgccgtggac atgcccgggc tcaacccgca gctatggacc
//
LOCUS       DASRPQ010000480         1038 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3820292, whole genome shotgun sequence.
ACCESSION   DASRPQ010000480 DASRPQ010000000
VERSION     DASRPQ010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3820292"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            40..>1038
                     /locus_tag="VFD73_05690"
     CDS             40..>1038
                     /locus_tag="VFD73_05690"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZI73510.1"
                     /translation="MNVEVTSPPIVQPASASKLAIADGDIHPQRNSYKDLFPYMETRW
                     VEMAKTFGSRPRQAYQAGPAYPKGQPNASRRDAWPPGGRPGSSLPFLQKQLLDQNNIT
                     LGILNPTGDNGASFQNREFGAGVASAMNRWVEAEWLIEPRLKGSIVVPYEDADAAVAE
                     IERWAGDPRFVQVLMVTRTANPPGQKQYWKIYEAAAAANLPIGVHAFGFGGYPVTGSG
                     WPSFYIEDMVGHAQSSQSFLTSLVIEGVFERIPNFKLVLIESGFAWLPPLAWRLDKLW
                     TRLKQETPHLKRTPSEYIRESVWLTTQPMEEPQPREHVLDAIDWIGWDRLIFATDYP"
BASE COUNT          204 a          333 c          323 g          178 t
ORIGIN      
        1 ccgggaaggc caaccaggcc cggatacgga gtccgcccga tgaacgtcga ggtaaccagc
       61 ccccccatcg tccagcccgc cagcgcatcc aagctggcga ttgcagacgg cgacatccac
      121 ccgcagcgca actcctacaa ggatctgttt ccctatatgg agacccgctg ggtcgagatg
      181 gcgaagacct tcggctcccg acctcgtcag gcttaccagg ccggaccggc ctatccgaag
      241 gggcaaccga acgcgtcccg tcgcgacgca tggccgcccg gcggacgccc cggcagcagt
      301 ctgccgtttc tgcagaagca gttgctggac cagaataata ttacactggg catcctgaat
      361 ccaaccggcg ataatggtgc cagcttccag aaccgtgagt tcggagctgg cgtcgccagc
      421 gcaatgaacc gctgggtgga agccgaatgg ctgatcgagc cccgcctgaa aggttcgatc
      481 gtcgtcccgt acgaagatgc cgatgcggcg gttgccgaaa tcgagcgctg ggccggcgat
      541 ccgcgcttcg tccaggtgtt gatggtgacc cggacagcca atccgcctgg ccagaagcag
      601 tactggaaga tctacgaagc cgcagcagcg gcgaacctgc cgatcggcgt gcatgccttc
      661 ggcttcggtg gctacccggt caccggctcc ggttggccgt cgttctacat cgaggacatg
      721 gtcggccacg cccagtcgtc gcagtcgttc ctcaccagcc tcgtgataga gggtgtgttc
      781 gaacgcattc ccaactttaa gctggtgctg atcgagtcag gctttgcgtg gttgccgcca
      841 ttggcatggc ggctggacaa gctgtggacc cggctgaagc aggaaacgcc gcacctgaag
      901 cgcacgccat cggagtacat ccgcgagagc gtgtggttga ccacccagcc gatggaagag
      961 ccacaacccc gggagcacgt gctggatgcg atcgactgga tcggctggga tcggctgatt
     1021 ttcgccaccg actacccg
//
LOCUS       DASRPQ010000481         1611 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3198767, whole genome shotgun sequence.
ACCESSION   DASRPQ010000481 DASRPQ010000000
VERSION     DASRPQ010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3198767"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(256..606)
                     /locus_tag="VFD73_05695"
     CDS             complement(256..606)
                     /locus_tag="VFD73_05695"
                     /inference="COORDINATES: protein motif:HMM:NF015720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPW repeat protein"
                     /protein_id="HZI73511.1"
                     /translation="MTAWRRWQDYVTMATGVLLFFSPIVFGETSSTVAAGAAYLLGIL
                     LFLSGILAAAMREARGVEVVPGVIAVITFLSPWVLGFAGVTGVAWSAWLLAIVAFLAA
                     GSQLVLSGRSVRAA"
     gene            complement(740..1231)
                     /locus_tag="VFD73_05700"
     CDS             complement(740..1231)
                     /locus_tag="VFD73_05700"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HZI73512.1"
                     /translation="MNTTESAAGPTWIRRIVVAADGSPASVRGVEQAANLAARIGAKV
                     LVVHVRHVPTGTLMGPSISAPSVLEALDELESEVRQQAVRILGGSGVTWDFVVRSGSA
                     GEEIVRVVKESGADLVVVGSNRHSSLHNLLLGSTAAYLTAHSPAPVLVMRALAPVAVA
                     AAK"
     gene            1341..>1611
                     /locus_tag="VFD73_05705"
     CDS             1341..>1611
                     /locus_tag="VFD73_05705"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HZI73513.1"
                     /translation="MRTWLDSELASTGLTTPQYAVLAAVEREGEVSASDLAREFGMSA
                     QTLNVLVKALETCGLLRRDRHPEHGRILLATLTARGRRALQEGRER"
BASE COUNT          326 a          554 c          487 g          244 t
ORIGIN      
        1 gacactccgc gcgattcagg gcgcccagcg ggcatgggcc aacagcctcg gggccaggat
       61 cggcgaggcc aacctgcggc aagcgagccg agtagtggag cagctaaccc gactgctaag
      121 ggacgattcc gattccggac gaagaccgag ggccggccgc tagctccgcc gagctcggcc
      181 cgagccgcac caactgtcag ccgccccaaa accgagcggg gcggtcacgc aaccgccccg
      241 cagttcgaac gaaattcagg ccgctctgac gctccggccg ctgaggacga gctggcttcc
      301 ggccgcgagg aaagccacga tcgcgagcaa ccatgcggac catgcgactc cggtcacccc
      361 agcaaatccg agcacccagg gcgacagaaa cgtgattacc gcgatgaccc ccggcacaac
      421 ctcgactccg cgcgcttcgc gcatcgccgc tgcgaggatc ccagacagga acaacaggat
      481 gccgagcaga taagctgcgc cggccgccac agtcgacgaa gtctcgccga aaacgatcgg
      541 ggagaaaaac agaaggacgc cggtcgccat tgttacgtag tcctgccacc gcctccaagc
      601 agtcatgaca gaaaacctcc acggggtacg ccacgtatat cgagtgaccg gcgccgggcg
      661 ctccccttgg gctcgactcg gtcatttccc gccgacggtt gagcgcgatg gcgcggcggg
      721 acgagagcca tcgctggttt catttcgcgg ccgcaaccgc caccggtgct agcgctcgca
      781 ttaccagcac gggggcgggg gagtgggcgg ttagataagc cgctgtcgaa ccgagcaaaa
      841 ggttgtgcaa agagctgtgg cgattgctgc cgaccacgac taggtcggcg ccgctctcct
      901 tcacgaccct gacgatctcc tcaccggcgc ttccagagcg caccacgaaa tcccacgtga
      961 cgcccgagcc accgaggatt cgaaccgcct gctggcgcac ctcagattcg agctcgtcaa
     1021 gcgcctccag aacagaaggc gcgctgatgc tcggtcccat cagtgtccct gtcggcacat
     1081 ggcgcacatg caccaccagc acctttgctc cgattcgagc cgcgaggttg gccgcctgtt
     1141 caaccccccg cacgctggca ggagacccgt ccgctgccac aacgatccgc ctgatccagg
     1201 tcggtcccgc agccgattca gtggtgttca tgacgtcacc ctccaactat ttcagtacac
     1261 tgaaatcaac gaaatgaggg accgtttcta ttccatctca gcctgacttt ctgattcagc
     1321 tccgaaggtc ccagcacgcg gtgcggacct ggctggacag cgagcttgcg agtaccggtc
     1381 tgacaacgcc gcagtacgcg gtgctggccg ctgtcgagcg ggagggcgag gtgtctgcat
     1441 ccgacctggc gcgtgagttc gggatgtcgg cccaaaccct gaatgtcctc gtcaaagcac
     1501 tcgagacatg cggtctcctg aggcgcgatc gccaccccga gcacggccga atcctgctgg
     1561 ccacacttac cgctcgtggc cgccgggcgc tacaggaagg ccgcgagcgt g
//
LOCUS       DASRPQ010000482         4367 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1622928, whole genome shotgun sequence.
ACCESSION   DASRPQ010000482 DASRPQ010000000
VERSION     DASRPQ010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4367
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1622928"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..435
                     /locus_tag="VFD73_05710"
     CDS             <1..435
                     /locus_tag="VFD73_05710"
                     /inference="COORDINATES: protein motif:HMM:NF020119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase C-terminal
                     non-catalytic domain-containing protein"
                     /protein_id="HZI73514.1"
                     /translation="FGGRFGAHDYRALKAGPSIAVFETEPFRQETEIIGQVAVDLLAS
                     ATVPDFDLWAQLFDVAPDGTAWNLSTAGTALQRASYRGGGPRRRRVRSGETVRLRMEG
                     MVTANRFLKGHRLRLIITPQFYPLFSVNPQTGAQEFDSDSVQ"
     gene            563..1084
                     /locus_tag="VFD73_05715"
     CDS             563..1084
                     /locus_tag="VFD73_05715"
                     /inference="COORDINATES: protein motif:HMM:NF016213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HZI73515.1"
                     /translation="MNESLALLFLVIVGLGGLVLIPLGLPGLWVILLGIIGYGWYTDF
                     NPYGLWFLLAEIGLAFLGEVLESWIGFRFARRYGGSRRAGWGALIGGIIGAIVGVPVL
                     LIGSVIGGFLGAFLGATLFEYTNQWRAGGSVRAGWGAVLGRAVAAALKIAVGVVMLVL
                     AIVVALFSGWQST"
     gene            1134..3185
                     /locus_tag="VFD73_05720"
     CDS             1134..3185
                     /locus_tag="VFD73_05720"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZI73516.1"
                     /translation="MTHLHTGVQADWKRVATEPFDQLVHLSRLIGHDPRLVQPGGGNT
                     SLKEGDLLLVKGSGTDLRTITRDGFSRLSLSGLATLRQSEAMSDAEMMRFMVGCMVGE
                     GPPPSVETPLHALLPYRVIAHTHDVPTMSLTNIRDPEAERLVGELFDGRVVYVPYVRP
                     GFPLAQAVSRMQARIPPEAIGLALAHHGLVVWGESARECYDRLLEVTGRIDEFIAARR
                     AVRPSDRPSLSPLLPGSERQRVAELVLPVIRGALSRPERMILHFDDADELVLELAGEE
                     IPDLVRRGMATPEHLLRAGRLPILLDLSNARSDEELISGIRGQLATARSDYESYHRRH
                     AAAGEQPLDDWAKVILIPGLGMVTAFNDKRNAVTADLCYRAVLETITNAEAIDRFEFI
                     PEKDVFEFEHWPLERRKIEEQIARERTAKLLPRHVVLVIGGGSGIGKAAARRFAEEGA
                     HVVVADLNGAMSHEVAAEIGGGGRAIGVVVDVRDDASLDALFRQTVLEFGGLDCLFYT
                     AGLPPRFAPVTEITRGALQEQLEVHYLGAVQAIGRAAAIMERQGLGGSIVASVSKAAV
                     VPGRDAVAYGGSKAALLQALRVAAVELGGHGIRVNAINADQIETPLFMQFVRERAASR
                     GVTPEQQLEVYRSRNLMGAELIPAEAVADLAVLLASEKFRFTTGDILTVDGGLPEAFP
                     R"
     gene            complement(3145..3564)
                     /locus_tag="VFD73_05725"
     CDS             complement(3145..3564)
                     /locus_tag="VFD73_05725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73517.1"
                     /translation="MSQDPSLATSAAQLGVRPSQVCQQLLAALDSSEGRRRRRKRDTT
                     PDSIGLSIKRELLEGAVEDDPDPEDFEGWLVRRCHSAPWGSGPALALALDIFGEWRLA
                     LTSDAFRNWLGSGAVSDDGQAEVRSISETPRVGRRPR"
     gene            complement(3561..>4367)
                     /locus_tag="VFD73_05730"
     CDS             complement(3561..>4367)
                     /locus_tag="VFD73_05730"
                     /inference="COORDINATES: protein motif:HMM:NF016131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HZI73518.1"
                     /translation="RTWLKLLGEVEAAVHRHESKPGAVVRRESGVTRPDDFPLLHGCT
                     LKADLQLLQRLFGRLTETAAAAELENEASLQHYRPEGEEALRLFAACVEQNREETARL
                     AARRGLDDGALASLFHFAVLPTLRAAGQELSDQIPGHWPHGYCPVCAAWPVLVERRGL
                     DRSRQLRCGRCASEWEMEWLTCAYCGERNHQRLGSLVCGDGDETLKVETCGSCRGYLK
                     SLATLQTIPASELLLRDLETVELDLIARERGYGRPERPPVAMRLRVVSAS"
BASE COUNT          727 a         1397 c         1439 g          804 t
ORIGIN      
        1 tttggcggaa gattcggtgc ccacgactat cgggcactca aggcggggcc gagcattgcg
       61 gtgttcgaga ccgagccgtt caggcaggag accgaaatca tcggccaggt cgctgtagat
      121 ctgcttgcca gtgccacggt ccctgatttc gatctctggg ctcagctctt tgacgtggca
      181 ccagacggca ccgcgtggaa cctgtcgacc gctggtaccg cactgcagcg tgcgagttac
      241 cgaggcggcg gtccccgccg gcgacgggtc agatccggcg agacggtgcg gctccggatg
      301 gaggggatgg taaccgccaa tcgctttctg aaaggacatc ggctccggct gatcatcacc
      361 ccgcagttct atccgttatt ctcggtcaac ccacagaccg gagcgcagga gttcgacagc
      421 gacagcgtgc agtagggcga gattcgcatt cgctccgggt cgcgaatgat actgccagtg
      481 gtcggtcgct aacactcttg ctcgagaact gtgactcgcg acttcctgac gactgaggac
      541 tgacgtctga cgactgctcc caatgaacga atccctcgcc ctccttttcc tcgtcatcgt
      601 cggtctcggc ggcctggtac tcatcccgct gggtctgccg ggtctgtggg tcatcctgct
      661 gggcatcatc ggttacggct ggtacaccga cttcaatccg tacggcctct ggtttcttct
      721 ggccgagatc ggcctcgcgt tcttgggtga agtgctggaa tcgtggatcg ggttccgctt
      781 tgcccggcgc tacggcggat cgcgtcgcgc cggctggggt gcgctgatcg gcggtatcat
      841 cggcgccatc gttggggtac cggtgcttct cattggctcg gtgatcggcg ggtttctcgg
      901 ggccttcctc ggggcgacgc tcttcgagta caccaaccaa tggcgtgccg gaggatcggt
      961 ccgtgccggg tggggtgcgg tgctgggccg ggcagtggcg gcagcgttga agatcgccgt
     1021 cggtgtcgtg atgctggtcc tggccatcgt ggtcgcgctg ttctccgggt ggcagagcac
     1081 ctgattctcc ccgctccctc gcgtccgaaa gcctcgcggg gcatcttcct ctcatgaccc
     1141 atctccacac cggagtgcag gcagactgga agcgcgtggc cacggagcca ttcgatcagc
     1201 tggtccacct ctccaggctc atcggtcacg atcctcgtct ggtccagccc gggggcggca
     1261 acacctctct gaaggaaggc gatctcctgc tggtaaaggg gagtggcacc gacctccgca
     1321 ccatcactcg cgacggtttt tcgcgacttt cgctctccgg ccttgccacg ctgagacagt
     1381 cagaggcaat gagcgatgcg gagatgatgc gcttcatggt cggctgcatg gtgggtgagg
     1441 ggcccccgcc cagcgtggag accccgctcc acgccctgct tccatatcga gtgatcgccc
     1501 acacccacga cgttcccacg atgagcctca ccaacatccg cgacccggag gcagagcggc
     1561 tcgtgggcga gttgttcgat gggcgagtgg tgtacgtgcc gtatgtccga cccggttttc
     1621 ctttggcaca ggcggtcagc cggatgcagg cccggattcc tccggaggcg atcggactcg
     1681 ccctcgcgca tcatggcctg gtggtatggg gagagagtgc ccgggagtgc tacgaccgac
     1741 tgttggaggt caccgggcgg atcgacgaat tcatcgcggc acgccgggcg gtccgccctt
     1801 ccgaccggcc gtcgctcagt cccctgctgc ccggtagtga gcgacaacgc gttgcggaac
     1861 tggtgctgcc cgtcattcgc ggagcactca gtcgtccgga gcggatgatt ctccatttcg
     1921 acgatgccga cgagctggtg ctggagctgg caggcgagga gatcccggac ctggtccgcc
     1981 gcggcatggc gacaccggag cacctcttgc gtgcaggtcg cttgccaatc cttctcgacc
     2041 tctccaacgc tcgatcggat gaggagttga tctccggcat tcgaggccag ctcgccactg
     2101 cccgaagcga ctacgagtcc taccatcgac gccacgctgc ggcgggcgag cagccactcg
     2161 atgactgggc caaagtcatc ctcatcccgg gactcggcat ggtcaccgca tttaacgaca
     2221 aacgaaatgc ggtcactgcc gacctgtgct accgggcggt attggagacc atcaccaacg
     2281 ccgaggcgat cgaccgattc gagttcatcc cagaaaagga cgtgttcgag ttcgagcact
     2341 ggccgttgga gcgccggaag atcgaggagc agatcgcaag ggagcggacg gccaagctcc
     2401 tgccacggca cgtcgtgctg gtgattggag gcggcagcgg aattggaaag gcggcggcca
     2461 ggcgctttgc cgaagagggt gcccacgtcg ttgtcgcgga tctgaatgga gcgatgtccc
     2521 acgaagtggc ggcagaaatc ggtggcgggg ggcgcgcgat cggtgttgtg gtcgacgtga
     2581 gggacgatgc cagtctcgac gccctcttcc gccagaccgt tctggaattc ggcggactcg
     2641 actgcctctt ctacaccgcg ggcttgccgc cccgctttgc cccggtcacc gagatcaccc
     2701 ggggcgccct tcaggagcag ctcgaggtgc actatctggg ggcggtccag gcgatcggcc
     2761 gagcagcggc catcatggag cgtcaaggcc tgggcggctc gatcgtggcc tccgtctcca
     2821 aggcagcggt ggtgccaggc cgggatgcgg tggcgtacgg cgggagcaag gcggcgctgc
     2881 ttcaggctct gcgggtggcg gcggtcgagc tcggcggtca tgggattcgg gtgaacgcca
     2941 tcaatgccga tcagatcgag acgccgctgt tcatgcagtt cgtgcgggag cgtgcggcca
     3001 gccgaggagt gacaccggaa cagcagctgg aggtctatcg gagccggaac ctcatgggtg
     3061 cggagctgat cccggccgag gcagtggcag acctggccgt gctgctcgcc agcgagaagt
     3121 tccgattcac caccggcgat attctcaccg tggacggcgg cctacccgag gcgtttccga
     3181 gatagagcga acctccgcct gtccgtcatc cgaaactgcg ccactgccca gccagttgcg
     3241 aaaggcatcg gaagtgagcg ccagccgcca ctcgccgaag atgtccaacg ccagggccag
     3301 cgcgggaccg cttccccagg gagcggagtg acaacgccgc accagccagc cttcgaagtc
     3361 ttccgggtcg ggatcatctt cgaccgcccc ttcaagcagc tcgcgcttga tcgagaggcc
     3421 gatgctgtcg ggagtagtgt cgcgcttgcg ccgtcggcgc cgcccttccg aagaatccag
     3481 cgccgcgagc agctgttgac acacctgcga ggggcgcacc ccgagttgcg cggcggaagt
     3541 cgcgaggctc gggtcctggc tcaagaggcg ctcacgactc gcaaacgcat cgccactggt
     3601 gggcgctctg gtctcccata tccccgctcc cgcgcgatca ggtccagctc cactgtttcg
     3661 agatctcgga gcagcaactc ggaagcagga atggtctgca gcgtagcgag cgacttcaga
     3721 tagcctcgac aactaccgca agtctcgacc ttgagcgtct cgtccccgtc gccgcacacc
     3781 agggagccga gccgctggtg gttgcgttcg ccgcaatagg cgcaggtaag ccactccatc
     3841 tcccattcag aggcgcagcg cccgcaccgt agttgtctgc tccggtctag gcctcggcgc
     3901 tcgacaagta ccggccaggc ggcgcagacg ggacagtagc cgtggggcca gtgcccgggg
     3961 atctggtctg acagctcctg ccccgcggct cgaagagtcg gaagcaccgc aaagtggaac
     4021 agcgaagcca gggcgccgtc gtccagtcct cgcctggcag ccagacgcgc cgtctcttcc
     4081 cgattctgct ccacgcaggc cgcaaagagc cggagcgctt cttcaccttc cggccggtag
     4141 tgctgcaatg acgcttcgtt ctccagctcg gcggccgctg ctgtttcggt tagccgacca
     4201 aacaaccgct gcagcagctg caggtccgcc ttcaacgtgc agccatggag cagcgggaaa
     4261 tcgtcgggtc tggtgacgcc ggattcgcgg cggacgaccg ctccgggttt tgactcgtga
     4321 cggtgtactg cggcctcgac ctcacccagc agcttcagcc aggtgcg
//
LOCUS       DASRPQ010000483         1766 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1309408, whole genome shotgun sequence.
ACCESSION   DASRPQ010000483 DASRPQ010000000
VERSION     DASRPQ010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1766
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1309408"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..697
                     /gene="yihA"
                     /locus_tag="VFD73_05735"
     CDS             <1..697
                     /gene="yihA"
                     /locus_tag="VFD73_05735"
                     /inference="COORDINATES: protein motif:HMM:TIGR03598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HZI73519.1"
                     /translation="DSGAARRRGKTAGASQSSTGARGAPVVHQALGTENPLVSQPIEF
                     VGSFPDPTVRVEPPLPEIAFIGRSNVGKSSLINALVGRPGLARVSGSPGKTRLLNFYR
                     LPRLYLVDLPGYGFARASKSSRAAYRQLIYGYVSRRQALAGVVWLLDIRRDPSPEDQS
                     MQELLTQSGRPVLVVLTKADKLTRSAQTLRVKQLADALGLPLDHIELTSSQTGLGIAE
                     LATSVAAAAGGTS"
     gene            694..1311
                     /locus_tag="VFD73_05740"
     CDS             694..1311
                     /locus_tag="VFD73_05740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73520.1"
                     /translation="MRVRLLATVLLLLGCAGHASGQSGERTRPLPPGFGSLTQNDLSL
                     RMQNDELEIRFIPLDPRILPLLARDAYQSFRTLVETNRRGIDSVASAAGVAQPGLALV
                     SFFGRRSDVRFDPQTLTVLVRNRVFRPLGTIPLTPRFTSGQLGVRDQVSAIYVFEEEL
                     PVDDSFTVSYANLASDDWQSRQQLLNRERARVSARSRGVGADTAR"
     gene            complement(1327..>1766)
                     /locus_tag="VFD73_05745"
     CDS             complement(1327..>1766)
                     /locus_tag="VFD73_05745"
                     /inference="COORDINATES: protein motif:HMM:NF014477.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HZI73521.1"
                     /translation="PATETQLDLGGIGVGYGLDRAIEVLRKAGITSAFLDVSGDCLAL
                     GAPPGESGWLVEIAAPQGNGKIVGSTRIADLALATSANSRSVVEYHRAVRGHVMNPRT
                     GWPADALRQVTVVARTGMEADALSTAMLVSGKPTRGVMRYYTA"
BASE COUNT          301 a          591 c          551 g          323 t
ORIGIN      
        1 ggacagcggg gcagcgaggc ggcggggcaa aacggcggga gccagccaaa gttctacggg
       61 cgcacggggt gcgcccgtcg tgcatcaggc tctcgggaca gaaaacccgc tggtttctca
      121 gccaatcgag ttcgtcggct cctttcccga tcccacagtc cgggtcgagc cgccgctccc
      181 cgagatcgct ttcatcgggc ggtcgaacgt cgggaaatcg agtctcatca acgcgctggt
      241 cggccgcccg gggctggcgc gggtcagcgg ttcaccgggc aagaccaggc ttctcaactt
      301 ttaccgactt ccccggctgt atctcgtaga tcttccggga tacggctttg cccgcgccag
      361 caagagcagc cgtgcggcct atcgccagct gatctacggc tacgtcagcc gacgccaagc
      421 gctcgcaggg gttgtctggt tgctcgatat ccgccgcgat ccttcgccgg aggatcaatc
      481 gatgcaggag ctgttgaccc aaagcggccg gccggtgctc gttgtcctga ccaaggccga
      541 taagctcacc cgctcggccc agaccctgcg ggtcaagcaa ctggccgatg ccctgggatt
      601 gccgctggac cacatcgagc tcaccagcag tcagaccggg cttgggatcg ccgagctcgc
      661 caccagtgtc gccgctgccg cgggagggac ctcgtgaggg tgcgattgct tgccaccgtg
      721 cttctgctcc tgggctgcgc cggccacgcc tcggggcaat caggcgaacg cactcgtccg
      781 ttgccgccag gctttggctc gctcacccag aatgatcttt cgctgagaat gcaaaacgac
      841 gagctcgaga tccgctttat tccgctggat ccgagaatcc ttccgctgct cgcgagagat
      901 gcgtaccaga gcttccgcac tctggtcgag accaatcgcc gagggatcga ttcggtcgcg
      961 tcggctgccg gtgtggcgca gcctggtttg gctctggtga gcttctttgg aaggcggtcc
     1021 gatgtacggt tcgatcctca gaccctgacc gtgctggtcc gaaaccgggt cttccggccg
     1081 ctggggacaa ttcctctcac cccccgcttc acctcagggc agctcggcgt gcgcgaccag
     1141 gtaagtgcga tttacgtctt tgaggaggag ctaccggtag atgattcgtt taccgtgagc
     1201 tacgccaacc tggcttcgga cgactggcaa agccggcagc agttgctcaa tcgggaaaga
     1261 gcgcgcgttt ccgcgagatc ccggggagtg ggagcggaca ccgcaaggta gagaaacctg
     1321 ccgccttcac gccgtgtagt accgcatcac accacgggtc ggcttccccg ataccaacat
     1381 ggcggtcgaa agcgcatccg cctccattcc ggtgcgggcc acgaccgtga cctgccggag
     1441 cgcatcggcg ggccagccgg ttctcggatt catcacgtga ccccgcacag cccgatgata
     1501 ctccacaacc gaccgcgagt tggctgatgt cgccagtgca aggtcggcta tccgggtaga
     1561 gcccacgatc ttgccgttgc cttgcggcgc ggcgatctcc accagccagc cactctctcc
     1621 ggggggagcc ccgagcgcca ggcagtcgcc actcacgtcc aggaatgcgc tggtgatgcc
     1681 cgccttccgc aacacctcga tggcccggtc gaggccgtac cccaccccga ttcccccgag
     1741 atcgagctgg gtctctgtcg cgggaa
//
LOCUS       DASRPQ010000484         1718 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4129742, whole genome shotgun sequence.
ACCESSION   DASRPQ010000484 DASRPQ010000000
VERSION     DASRPQ010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4129742"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..>1718)
                     /locus_tag="VFD73_05750"
     CDS             complement(75..>1718)
                     /locus_tag="VFD73_05750"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HZI73522.1"
                     /translation="LAYTQDTTGSEWYTIYVKDLRTGALLPDKVDSVSYGLEWAADGK
                     TLFFTRDNAAHRPDRIFRRTLGQSADTLVVTEPDSLFTMDLSKTKDRKYLLASSHSYT
                     SGEVRYLSTDQPAADWRVLVPRREGVEYSAEHHGDDFLVLTNDRAMNFKVMLVPTAAP
                     DPEHWTELVPASDSTLTEGMDVFDHYLVLYRRGDARQQIRVVPFDGSALYDVKFPELV
                     HAYQPGDNPDFHSGAVRFTYSSPRTPPTVYDYDLSSHAWKIRKVTDVPHFDPKLYRTE
                     RVWAPASDGARVPVSLFYRRSIDRGVPVPMLLYAYGSYGFSTDPGFSLRILPLVDRGW
                     VCAIAHIRGGQEMGRAWYDQGKMLKKKNTFNDFIAAAEYLEKEGWTAPDRLAIRGGSA
                     GGLLMGAVTNMRPELFRVVIADVPFVDLINTERDPSLEFTTQEWQQWGNPNVPEQFAY
                     MRSYSPYDNVERKAYPAMLVMAGLNDPRVNYWEPAKWVAKLRAMKTDSNPLLFKINMG
                     AGHGGRSGRYEALRDEAFRYAFALDVIGSGSRRRLAESR"
BASE COUNT          319 a          542 c          541 g          316 t
ORIGIN      
        1 gtggtggccg gggccgaggt cgtggcatcg gaggaggcgg agttccaccg gcagtgctgc
       61 gatagcagct cggctcaccg gctttcagcc agccgacgcc tggagccact cccaatcacg
      121 tccaaagcaa aggcgtagcg aaacgcttcg tcgcgaagcg cctcgtagcg tcccgaccgt
      181 ccgccgtgcc ccgctcccat gttgatcttg aatagcagcg gattggagtc ggtcttcatg
      241 gcacgcagct tggccaccca ctttgccggc tcccagtagt tgacccgcgg atcgttcagg
      301 cccgccatca ccagcattgc cggatacgcc tttcgctcca cgttgtcata gggcgaatac
      361 gagcgcatgt aggcaaactg ctccgggaca ttggggttgc cccactgctg ccattcctgg
      421 gtggtgaact cgagtgaggg atcccgctcg gtgttgatga gatccacgaa gggcacgtcg
      481 gcgatgacca cccggaagag ctcggggcgc atgttcgtca ccgctcccat cagaagcccg
      541 ccggcacttc caccccgaat cgcgagccgg tcgggagcgg tccacccctc tttctccaga
      601 tactcggcgg cggcgatgaa atcgttgaag gtgttcttct tcttcagcat cttgccctga
      661 tcgtaccagg cccgccccat ttcctgcccg ccacggatgt gcgcgatggc acagacccag
      721 ccccggtcca ccagcgggag aatccgcagg ctgaagcccg gatcggtgct gaagccgtac
      781 gacccgtagg cgtagagcaa catgggaaca gggacacctc ggtcaatcga tcgccggtag
      841 aacagcgaga cgggaactcg tgccccgtca ctcgcaggag cccacacccg ctcggtccga
      901 tagagcttgg gatcgaagtg ggggacgtcc gtgaccttgc gaattttcca ggcgtgcgac
      961 gacagatcgt agtcgtagac cgtaggtggc gtacgaggcg agctgtaggt aaatcgcacc
     1021 gcaccggagt ggaagtcggg attgtcaccc ggctggtacg catgaaccag ctcggggaac
     1081 ttcacgtcgt atagcgcact tccatcgaac ggaaccaccc ggatctgctg ccgggcgtcg
     1141 cctcggcgat agagcacgag gtagtgatcg aagacatcca tgccttctgt cagcgtggag
     1201 tcgctcgccg gcaccagctc ggtccagtgc tccggatcgg gggccgccgt cggcaccagc
     1261 atgaccttga agttcatggc ccggtcgttg gtgagcacca ggaaatcgtc cccatgatgc
     1321 tcggcggagt actccacccc ctctcgcctc ggcaccagga cccgccaatc ggccgcaggc
     1381 tgatcggttg acaagtagcg cacctcaccc gaggtgtagc tgtggctgct ggcgagcaga
     1441 tacttccggt ctttggtctt gctcaaatcc atggtgaaga gggagtcggg ctcggtcact
     1501 accagggtat cggccgactg gcccagagtg cggcgaaaga tccggtcggg acggtgggca
     1561 gcgttatcgc gggtgaagaa cagcgtcttg ccgtcggccg cccactccag tccgtaactc
     1621 acactgtcca ccttgtcggg aagcagcgcg ccggtccgga ggtccttcac gtagatggtg
     1681 taccactcgg acccggtggt gtcctgggta taggcgag
//
LOCUS       DASRPQ010000485         2182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3199059, whole genome shotgun sequence.
ACCESSION   DASRPQ010000485 DASRPQ010000000
VERSION     DASRPQ010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2182
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3199059"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..723
                     /locus_tag="VFD73_05755"
     CDS             <1..723
                     /locus_tag="VFD73_05755"
                     /inference="COORDINATES: protein motif:HMM:NF025687.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4386 domain-containing protein"
                     /protein_id="HZI73523.1"
                     /translation="DGAKMSTSRNPGRVTGLWYLLLVAIGPLTLIYIPNKLIVPENPG
                     ATVANIAAHEWLYRSGMAADLVGALVLILLVMAFYRLFKGVDQHLAVLVIIFGGVMPA
                     LIYFVNVVSSAGALLLVQGGGFVSVFDNQQRNALVMLFLRLHDYQITAAEMLWGVWLF
                     PLALLVYRSGFLPRFLGVWLIINGLAYVIMSLTGFLLPQYQETVFRLGQPAFLGEIAL
                     MLWLLIKGAPPAIPATTLAAAA"
     gene            complement(768..1526)
                     /locus_tag="VFD73_05760"
     CDS             complement(768..1526)
                     /locus_tag="VFD73_05760"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HZI73524.1"
                     /translation="MDLGLRGKSAVVTGASKGIGRAIALRLADEGAGVAICARSEPAL
                     RKTEAELRSRSVPVYAAVCDIAIPEALDGFLEAARANVGQIDILVNNPSGFAFADDQA
                     AWDSTLAVDLMAAVRATAKVAAWMAGYGRGSIVHISSIAGMEAGGFPASYGAAKAALI
                     SHGKSLAVALAPQKIRVNTIAPGSIEFRDGIWDQVRHNNPDLYSAVLKTIPSGRMGTP
                     EEVADLVVFLASERASWVTGACIVVDGGQHKANL"
     gene            complement(1559..>2182)
                     /locus_tag="VFD73_05765"
     CDS             complement(1559..>2182)
                     /locus_tag="VFD73_05765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73525.1"
                     /translation="RRSKEAQLEAERVISDRQRELAQTVASNAALIAQAEAKRQEALG
                     VQRTSELDATQIAQAKADAERVRIEAEAAADAEAIKIRTIAAAQAESIQKVNQAIQAG
                     GEAYFRYRQIEMVPTITPAIADALGKARLITVSGGGTAGAPDSATQSMMGVIQTVLAA
                     QLVAKGDLVGVNDTGRSHGDGLDTTATPVKAAGPASSVPTIRTTRGT"
BASE COUNT          342 a          730 c          661 g          449 t
ORIGIN      
        1 gatggagcga agatgagcac aagccgcaac cccggaaggg tcaccggtct ttggtacttg
       61 ctcctggtgg ccatcggtcc gctcacactg atctacatcc ccaataagct gatcgtgccg
      121 gagaacccgg gcgccaccgt cgccaacatc gctgcgcacg agtggctcta ccgctccggg
      181 atggcagccg acctggtggg cgctctcgtc ctgattcttc tggtaatggc gttctaccgg
      241 ttgttcaagg gtgtggatca gcacttggcg gtgctggtga tcatcttcgg cggagtcatg
      301 cctgctctca tctacttcgt caacgtggtg agcagcgccg gtgctctctt gctggtgcag
      361 ggtggcggct tcgtatcggt ctttgacaac cagcagcgga acgccctggt catgctgttc
      421 cttcgcctgc acgactatca gatcacggcc gccgaaatgc tctggggagt atggctcttc
      481 ccgctggctc tcctggtcta ccggtccggt ttcctgcccc gatttctggg cgtgtggctc
      541 atcatcaatg gtctggctta cgtcatcatg agcctcaccg ggttcctgtt accgcagtat
      601 caggagacgg tgttcaggct agggcaaccg gcgttcctgg gagagatagc gctcatgctc
      661 tggctgctca tcaaaggtgc gccaccggcc atcccggcga cgaccttagc ggcggctgct
      721 tagatagagc cgcgtgacgg gtttgctccg accaccggcg gaggccttta caagttggcc
      781 ttgtgctggc cgccatcgac cacgatgcat gcgccggtca cccaacttgc ccgttcggaa
      841 gccaggaaca ccactaaatc agcgacttcc tccggagtgc ccatccggcc ggagggaatc
      901 gtcttgagca cagcactata gaggtccgga ttgttgtgcc tgacctggtc ccagatacca
      961 tcgcgaaact cgatggaccc gggagcaatt gtgttgactc gaattttttg cggagccagg
     1021 gcgacggcca gcgacttgcc gtgactgatc agcgctgcct ttgcggcgcc gtaggatgcg
     1081 ggaaagccgc cggcctccat acccgcgatc gatgagatgt gcacgatgga cccgcgtccg
     1141 tagccagcca tccaggctgc caccttcgcg gtggcgcgca ccgccgccat gagatcaacc
     1201 gcgagggtgg agtcccaggc agcttgatcg tcggcaaagg cgaacccact cgggttgttg
     1261 accaggatgt cgatctgacc gacgttggcg cgtgccgcct ctagaaagcc atcgagcgcc
     1321 tcgggtatgg cgatgtcgca gaccgcagcg tagaccggca ccgatcggct gcgcagctcc
     1381 gcctcggtct tgcgcaatgc cggctcactg cgggcgcaga tggcgacacc tgctccctcg
     1441 tccgccaggc gtagcgcaat cgcccgcccg atgcctttgc tcgccccggt cacgacagcg
     1501 gacttcccac gcagtcctag atccatgatt cagctcagaa gcggcgcgcg cccagagctc
     1561 aggtcccgcg agtggttcgg atcgtcggga ccgagctcgc cggtccggca gctttcactg
     1621 gagttgcggt cgtgtccagg ccatcgccgt gggaccgacc tgtgtcgttc actcccacca
     1681 gatctccctt ggccacgagc tgcgccgcca gcaccgtctg gatcacgccc atcatgctct
     1741 gcgtggcgct atccggcgcg cctgcggtgc cgcctcccga cacggtaatc agccgagcct
     1801 ttcccagcgc atcagcgatc gccggcgtga tggtaggcac catttcgatc tggcgatacc
     1861 ggaagtacgc ctcgcctccg gcctggatcg cctgattcac cttctgaatg ctttcggcct
     1921 gcgcagcggc gatcgtcctg atcttgatcg cctccgcgtc ggcggccgcc tccgcttcga
     1981 tccgcacccg ttctgcgtcg gctttggcct gcgcgatctg ggtggcatcc agctccgagg
     2041 tccgctgcac tcccagcgcc tcctggcgct tggcttccgc ctgggcgatc agtgccgcgt
     2101 tcgaagccac cgtctgcgcc agctctctct gccggtcgga aatgactcgc tcggcctcga
     2161 gctgcgcttc cttggaccgg cg
//
LOCUS       DASRPQ010000486         2113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_683837, whole genome shotgun sequence.
ACCESSION   DASRPQ010000486 DASRPQ010000000
VERSION     DASRPQ010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_683837"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..239)
                     /locus_tag="VFD73_05770"
     CDS             complement(<1..239)
                     /locus_tag="VFD73_05770"
                     /inference="COORDINATES: protein motif:HMM:NF024940.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI73526.1"
                     /translation="MIWDDRVVRENDGRKLDHKTLEALRLRAVDQVQQGAHPEDVAAA
                     LGLHRKTMYGWLKTYREGGRGVLLARPVPGRPPRLG"
     gene            complement(330..1733)
                     /locus_tag="VFD73_05775"
     CDS             complement(330..1733)
                     /locus_tag="VFD73_05775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73527.1"
                     /translation="MNYDVNRSENHRLIYWQQRAGLNNTRLAVAIRERAGARGHRHVQ
                     PDARRVRAWRQGERPRDPVPELILEILSERIGVTLMLSDVGLDVPGAERGRWDGPWSL
                     VQTVTEIIALARGDLMLGGRTGTSSPQEFLRGEDLLSIVQSWTTTAAESSGMGIRTGR
                     KRIGDLEVVQIRAATEAFRSLDNAYGGGLTREAVIGQLISAASLVEDTTYSEEVGRKL
                     ITGIGDLATVAGWMCHDVSMHVAAQRYFLLALQASREADAPDLAAHVLGCMARQAGHL
                     GRPDDALELIHLARYGARHTMTPRIGALLYSLEARYNAMMGRLKDFDRAAGQAEAAFA
                     DCGPEQDPSWVTYFDTSEYYATLGICHQIIARTSIPDHARRSIEMIGHALAHRDPSRV
                     RSRAFDYLGLSRAYLAAGELEPAEAAGTTALELTGKVSSERVRDRLNELLRETSPYAD
                     IPVIADLRGRILDRLSN"
BASE COUNT          394 a          696 c          618 g          405 t
ORIGIN      
        1 cccagccgcg gcggccgacc cgggaccggc cgggccagca gcacgccccg gccgccctcg
       61 cggtaggtct tcagccaccc gtacatcgtc ttgcggtgca gcccgagcgc cgccgcgaca
      121 tcttccggat gcgcgccctg ctgcacctgg tccaccgccc gcaggcgcag cgcctcgagc
      181 gtcttgtggt ccagcttgcg gccgtcgttt tcacgcacga cccgatcatc ccagatcacg
      241 agatctaagt cgacttactt atgaagtcct tggtaacgct cttcacactg catcacctca
      301 gaaagagccg cacccaaagt tttggcgctt cagttcgaga gccggtcaag aattctgccc
      361 cgaagatccg cgatgacagg tatatctgcg tacgggctgg tttcgcggag gagttcattg
      421 agacggtcac gtacacgctc cgagctgacc ttgccggtaa gttccagcgc cgtcgtccca
      481 gcggcctcag caggctccaa ttctcccgca gcaagatagg cccgagaaag gccaagatag
      541 tcgaaggcac ggctacgcac gcgggacggg tctcggtggg caagagcgtg gccgatcatt
      601 tcgatcgagc gccttgcgtg atcagggatc gaggtccgcg caataatctg gtggcaaatt
      661 ccgagtgtcg cgtaatactc actggtatcg aagtacgtca cccatgaagg atcctgctcc
      721 gggccacaat cggcgaatgc cgcctcagcc tggcctgcgg ctcgatcaaa gtccttcaat
      781 cttcccatca ttgcgttata cctagcctct aggctgtaca ggagcgcacc aatcctgggc
      841 gtcatggtgt gacgggcgcc ataacgcgca aggtggatca actccagtgc gtcgtcgggt
      901 cgacccagat ggccggcttg cctggccata cagcctagga catgggctgc aaggtcaggg
      961 gcgtcggcct ctctggaagc ttggagagca agcaagaagt aacgctgagc ggcgacatgc
     1021 atcgacacgt catgacacat ccaacccgcg accgtagcca ggtcaccgat cccggtaatc
     1081 agctttcgcc ccacctcctc cgagtaggtc gtgtcctcca ccaacgaggc cgccgagatg
     1141 agctgtccga tgaccgcctc ccgggtaagc ccgccgccat aggcattgtc caatgaccgg
     1201 aatgcctcag tcgccgcacg gatctgcacg acctctaggt cgccgatccg tttgcggcct
     1261 gttctgatcc ccatgccgga agactcggct gctgttgtcg tccaagactg gacgatgctt
     1321 agcagatcct caccgcgcaa aaactcctga ggcgacgacg ttccggtgcg tccgccgagc
     1381 atcagatcac ctctggcgag agcaataatt tcagtgaccg tttggactag cgaccacggt
     1441 ccgtcccacc ggcctctctc cgctccgggc acgtccaggc cgacatcgga tagcatcagt
     1501 gttaccccaa tgcgctcact gagtatttcg agtatcagtt cgggaactgg atcgcgcggc
     1561 ctttcgccct gccgccatgc tctgacccga cgagcatcgg gctggacatg tcggtgccca
     1621 cgtgctccgg cgcgctctcg tatggcgacg gcaagccggg tgttgttaag gccagcgcgc
     1681 tgttgccagt agatgagccg atgattttca gaccgattga cgtcgtagtt caccagaacg
     1741 cctccgtagc cgtggacagc tggtcgtttt cgtgatcatg gtgcttccca cggcgtccgg
     1801 atcggccgag cggtggtgca gctcgtcgag cgcctcacga gcctgcccgc atgcccagcc
     1861 gccaggctcg tcgaatatgc tcgcggaccg tgatccatgc cgtacccgag acatcgaggc
     1921 ggccgcgatc cggtccagtc ggggtacggt ctcgatgtcc cagcccctga gtaccacgca
     1981 ctcgccgtgc ggtaggttct tccgtggctt ggacttccgc acgccgccct cccgtgggaa
     2041 ttgacactgg acaagccagc acgctagccg gggagggcgc gccatgttta gaccgacacg
     2101 ccggagatta ctg
//
LOCUS       DASRPQ010000487         2942 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2576512, whole genome shotgun sequence.
ACCESSION   DASRPQ010000487 DASRPQ010000000
VERSION     DASRPQ010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2942
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2576512"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..800
                     /locus_tag="VFD73_05780"
     CDS             <1..800
                     /locus_tag="VFD73_05780"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI73528.1"
                     /translation="GYGVLLGAVGVGAIAGAFALPRFSQRLSLNQLLVVASVAYGLAM
                     AVLVTVHNPIAACVVLVPAGAAWVLVIANLNATLQVFLPGWVRARGLAAYQIVVFGSQ
                     AGGALVWGFLAEWTGLIAVFLIAAGALLAAVATIRVWPLYDVRGVNREATVVWPEPSL
                     GFEPDPDTGPILVTTTYTVSPDRQERFFQATERLRLSRLRTGAIRWELYQDGADPTRF
                     VEEYTVPSWEEHLRQHHGRLTGADVEIEREVDALSDPPPQTRHLFPA"
     gene            860..1201
                     /locus_tag="VFD73_05785"
     CDS             860..1201
                     /locus_tag="VFD73_05785"
                     /inference="COORDINATES: protein motif:HMM:NF024143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HZI73529.1"
                     /translation="MASEDGPVQPSPAPTVHDIETRGRAGFVSGFFLGVLMGAGIALL
                     FAPERGEKTRNRLRRRMRSLSEDARDGIDNASNRTREELQKRRKRLRAELEEIRKRAK
                     ARAQEARKSLE"
     gene            complement(1202..2020)
                     /locus_tag="VFD73_05790"
     CDS             complement(1202..2020)
                     /locus_tag="VFD73_05790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73530.1"
                     /translation="MESPFQIVPTSSLSWYTPALLLGTLLVCPLFGAAAQKPADHVAL
                     GMAADEAHDPRTALQHYQAALDQDSSNYEANWRGAMTLLTLGEQRTGNKNQERDSLYS
                     QAVRYARRAVKANPSGADGHFALAASLGRESLSMGKKDRIRHAAEIRSEALRTLALNP
                     KHDGAYHILGRWNAEIMRLSGFSRFFAKSFLGGGIFKDASWSKAIYNMEKAVELDPGR
                     IYHHLELAEIYADRKRYNDAAQQLHLVDSLPAREIMDSAYKRQGASLERQLARH"
     gene            1990..>2942
                     /locus_tag="VFD73_05795"
     CDS             1990..>2942
                     /locus_tag="VFD73_05795"
                     /EC_number="2.4.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006206 - pyrimidine nucleobase metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="HZI73531.1"
                     /translation="MSARSGMVIPSLIQHKRDGRELSPGDWTQLIERYTAGEVPDYQM
                     AAMLMAVVWRGLSSSELAALTDAMLNSGDRLNFDGFMLPRADKHSTGGIGDKVSLLLA
                     PMVASCGVAVPMMSGRGLGHTGGTLDKLEAIPGFRTGLSLVEARGQVERIGCVMLGQT
                     PEIAPADKKLYALRDVTGTVESIPLISASIMSKKLAEGLNGLVLDVKTGSGAFLPEVS
                     QAIELARTMIAIGKARGCPTVALLTAMDRPLGRACGNALEVEEAIEALRGEGPSDLME
                     VTYALGTEMLLVVGAAQKPQDARKQLEKSVTSGSALEKLGQ"
BASE COUNT          508 a          894 c         1003 g          537 t
ORIGIN      
        1 aggggtacgg ggtgctcctt ggggctgtgg gggtaggcgc tatcgcgggc gcgtttgcac
       61 tgccgcggtt ttcccaacgg ctctcgctca accagctgct cgtcgttgcc agtgtcgcat
      121 acgggctcgc aatggccgtg ctcgtcacgg tgcacaaccc catcgccgcc tgcgtggtgc
      181 tggttccggc cggcgctgcc tgggtgctag tcatcgccaa cctgaacgcg acactccagg
      241 tgtttctccc ggggtgggtg cgggctcgag gcctcgccgc ctatcaaatc gtggtgttcg
      301 gatcgcaggc gggaggcgcg ctggtctggg gattcctggc tgagtggacc gggctcatcg
      361 ccgtcttcct gattgcagcg ggggcgctgc tggctgctgt ggcaacgatc agggtctggc
      421 cattgtacga cgtccgggga gtgaatcgcg aggcaacggt ggtgtggccg gagccatcct
      481 tggggttcga gccggaccca gacaccggtc ccattctggt caccactacc tacacggtgt
      541 cgccggatcg tcaggagcga tttttccagg caaccgagcg actccggctt tcccggctcc
      601 ggaccggcgc catccggtgg gagctgtacc aggacggggc tgacccgacc cgcttcgtgg
      661 aggagtacac cgtgccctcc tgggaggagc atttgcgaca gcaccacggc cggctgaccg
      721 gcgctgatgt cgagatcgag cgggaggtag acgccttgtc cgatccgccg ccccagacca
      781 gacatctgtt tccggcttag aggggagcgc gctcccggct gtcccgctac cttgaatcgt
      841 gcacaaccat ggagccatga tggcaagcga agatggtccg gttcagccct cgccggcgcc
      901 caccgtccat gacatcgaga ctcgcggccg agccgggttc gtctccgggt ttttcctggg
      961 agtgttgatg ggcgccggta tcgcgcttct ctttgcgccc gagcggggag agaagacccg
     1021 aaatcgccta cgtcggcgga tgcgctcgct gtcggaggat gcgagagacg ggatcgacaa
     1081 cgccagcaat cgtacgcgag aagagctgca gaagaggcgc aagcggctca gagccgagct
     1141 ggaagagatc cgcaagcgcg ccaaggctcg agcgcaggaa gcccgaaaga gtctagagta
     1201 gttagtgcct tgccagctgt cgctcgaggc tcgctccctg ccgcttgtac gctgagtcca
     1261 tgatctcgcg tgccggcaga gagtccacca gatggagctg ctgtgcggca tcgttgtagc
     1321 gtttgcggtc ggcataaatt tccgccagct ccaggtgatg gtagatccgt ccggggtcca
     1381 gctcgaccgc cttttccata ttgtagatcg ctttggacca cgacgcgtcc ttgaagatgc
     1441 cgcccccgag gaagctcttg gcgaagaacc ggctgaaccc cgacagccgc atgatctcgg
     1501 cattccagcg gcccaggatg tgataggcgc cgtcgtgttt gggattgaga gccagcgtcc
     1561 ggagcgcctc actgcggatc tctgccgcgt gccgaatccg gtccttcttg cccatgctga
     1621 gcgactcccg tccaagagag gccgctaatg cgaagtgccc gtcggctccg gacggatttg
     1681 ccttgacggc gcgtcttgcg tagcgaacgg cctgggaata gagcgagtcg cgctcctggt
     1741 tcttattgcc ggtccgctgc tctcccaaag tgaggagggt catggccccc cgccaattcg
     1801 cctcgtagtt ggaggaatcc tgatccagag ccgcttgata gtgttgcagc gccgtgcgcg
     1861 gatcgtgtgc ctcatcggcg gccatgccca gggcgacatg gtccgccggc ttctgggcag
     1921 cggccccgaa gagcggacag acgaggaggg tcccaagcag cagggccgga gtgtaccagg
     1981 agagggaaga tgtcggcacg atctggaatg gtgattccat cgctgattca gcacaagcgc
     2041 gacggccgcg agctttcgcc gggggactgg acccaactca tcgagcggta taccgcaggc
     2101 gaggtgccgg actatcagat ggcggcgatg ttgatggccg tggtctggcg cggcctgtcc
     2161 tcgtcggagc tggccgcgct gaccgacgcc atgctgaact cgggagaccg gctcaacttc
     2221 gacggcttca tgctgccccg ggccgacaag cattccaccg gcggcatcgg ggacaaggtg
     2281 tcgctgctgc ttgctcctat ggtggccagc tgcggagtgg cggtgccgat gatgtccggc
     2341 cgaggactgg ggcacaccgg cggtaccctg gacaagctgg aggcgatccc cggatttcgc
     2401 accggcctca gcctcgtgga agccagagga caggtcgagc gaatcggctg cgtgatgctg
     2461 ggacaaacac ccgagatcgc gccagcggac aagaagctct atgcccttcg tgacgtcacc
     2521 ggaacggtcg aatcgatccc gctgatctcg gccagcatca tgtccaagaa actggcggag
     2581 ggtctcaacg ggctggtgct cgacgtgaag acgggaagtg gagcgtttct gcctgaggtc
     2641 tcccaggcca tcgaactggc tcggacgatg attgcaatcg gtaaggcgcg aggctgtccc
     2701 accgtggccc ttctcacggc aatggatcgt ccgctgggcc gagcctgcgg caacgccctc
     2761 gaagtggagg aggcaatcga agcgctccgg ggcgagggcc cctccgacct gatggaagtg
     2821 acctacgcgc tgggcacgga gatgctgctc gtggtcggtg ccgcacagaa gccccaggac
     2881 gctcgcaaac agctggagaa gagcgtcacc tcgggcagcg cgttggaaaa gttgggccag
     2941 at
//
LOCUS       DASRPQ010000488         1210 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3821711, whole genome shotgun sequence.
ACCESSION   DASRPQ010000488 DASRPQ010000000
VERSION     DASRPQ010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1210
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3821711"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..386
                     /locus_tag="VFD73_05800"
     CDS             <1..386
                     /locus_tag="VFD73_05800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73532.1"
                     /translation="IGSPGYPLDEAWLRRIGELMYARGGFDRAARARQGAAILASGDR
                     TPALATQQIPDIPLIADVGQHDRDGDWVSACPPFDDQFDVAGLGKLSCRPVLTCPEPV
                     EEFRKIVRPITPIKPSPEPAPSSKW"
     gene            861..>1210
                     /locus_tag="VFD73_05805"
     CDS             861..>1210
                     /locus_tag="VFD73_05805"
                     /inference="COORDINATES: protein motif:HMM:NF016001.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase/quinone reductase family protein"
                     /protein_id="HZI73533.1"
                     /translation="MAWLVALPRLFRRHRDVMLSLAPFRKFLTTYNGLTRSISGTPRS
                     SWGLLSHDGRRSGRHYQTSLGTTAFGDGFLLPLGYGTGSDWYRNIMATGRCELAWKGR
                     TYQLSRPELINGPTA"
BASE COUNT          227 a          409 c          342 g          232 t
ORIGIN      
        1 tgatcggctc accgggctat ccgcttgatg aagcgtggct acgccggatc ggcgaactta
       61 tgtatgcccg tggcggattc gatcgggccg cacgagcgcg ccagggtgct gccatcctgg
      121 ccagtggaga ccggacaccc gcgctggcca cccaacagat ccccgacata ccactgatcg
      181 ccgatgtcgg ccaacacgac cgggacggcg attgggtttc cgcttgtccg ccctttgacg
      241 atcagttcga cgtcgcgggc ctgggcaagc tttcctgcag acccgtattg acgtgcccag
      301 aacctgttga ggagtttcgc aaaatagtgc ggccgatcac cccgataaag ccatcgcctg
      361 agcctgcgcc atcgtcgaag tggtgacgtc ctgtcggtca tgggattcac cgtgccatcc
      421 cgctcggctt ggcgctctcc acgccatcaa tgacttcgga atccgtgagc gtcagtacca
      481 cacccacacc gcagctgtct cgattctaga tcgcccgctt gtgcaactat tgttcgacgc
      541 tgcgccacaa acgcagcttc ttgctcaact gcccccgctg agcgccaccg cgcaggtgca
      601 aagggcttaa atcgacctgc tgccgtcctg atcccgatcg gatccgacga ggttagcgga
      661 tttccggacc ctgccaggat gccgtggtat tcgatcatga gatgactttc gcctctggtg
      721 caacagttag gccacaggtg aactgaactg attccgttca ggaactccct ccgagagggg
      781 ccatgacaat ggatcacact ggtacgcacc gccggcaacg atggacatgc gctctaatac
      841 tcgctgtggg cgcggtcgtg atggcctggc tcgtcgcgct acccaggctc ttccggcgac
      901 accgcgacgt aatgctctct ctggctccgt tccggaagtt cctcaccaca tacaacgggc
      961 tcacccgcag catctcagga accccacgct cgtcgtgggg cctcctgagc cacgacgggc
     1021 gccgcagcgg acgccactac caaacctcgt tgggcaccac ggcctttggc gacggcttcc
     1081 tgctgccact cgggtacggc accggaagtg actggtaccg caacatcatg gcaactggcc
     1141 gttgcgaact ggcctggaag ggccgcacct accagctctc ccggcccgaa ctgatcaacg
     1201 ggccaacggc
//
LOCUS       DASRPQ010000489         1701 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4445266, whole genome shotgun sequence.
ACCESSION   DASRPQ010000489 DASRPQ010000000
VERSION     DASRPQ010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4445266"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..440)
                     /locus_tag="VFD73_05810"
     CDS             complement(<1..440)
                     /locus_tag="VFD73_05810"
                     /inference="COORDINATES: protein motif:HMM:NF037785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73534.1"
                     /translation="MRTPVIGIMGAAAPTPASYAAAEKLGRLVAERGWIVLTGGEPSG
                     VMAAACAGAKQVAGSLTLGILPGTSERAGPDVDVAVFTGMGDARNAINVLSSDIIVVC
                     GVEGPGTTSEVALAIKAGKPVILLGASSAARAFFRSVGEWLPAA"
     gene            complement(444..1241)
                     /locus_tag="VFD73_05815"
     CDS             complement(444..1241)
                     /locus_tag="VFD73_05815"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZI73535.1"
                     /translation="MEAVQNRVVLITGGSSGIGRAAGQAFARAGWRVVLAARGQERGE
                     DAAAALRKEGGDVRFLRADVSRRSDVERLISDTVAAYGRLDAAFNNAATVDGAFAMTA
                     DFTEEQFDRAISMNLKSVWLCMVQEIRQMLAQNPAGGAIVNTSSVNGLGGSAGGSLYS
                     AAKAGVLALTKSAAQEYAGRGIRVNALVAGAFRTPMLERVFEVAGAGSAEGAARVEEG
                     YTALVPLRRIGAPEEAAAAAVWLCSEAASYVTGHSLIVDGGMTAAMR"
     gene            complement(1289..1519)
                     /locus_tag="VFD73_05820"
     CDS             complement(1289..1519)
                     /locus_tag="VFD73_05820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73536.1"
                     /translation="MQVLRYIVVLLAGFLVGSRVVDAAQTWREWQVAAAASPNAAELH
                     GYFLRDLGIAVLSLAIAALIWWLLRPASSSRK"
BASE COUNT          320 a          610 c          485 g          286 t
ORIGIN      
        1 tcagctgcag gcagccactc accaacggac cggaagaacg ctcgcgctgc ggacgatgcg
       61 cccagaagaa tcaccggttt tcccgccttg atcgcaaggg caacctcgga agttgttccg
      121 ggtccttcca ctccgcacac cacgatgata tcgctggaga gcacgttgat cgcgtttcgc
      181 gcatctccca tcccggtaaa cacggccacg tccacatcgg ggcccgctct ttcgctcgtg
      241 cccggcagaa tacccaacgt gagacttcca gcgacctgct tggcgccggc gcacgccgca
      301 gccatcacac cagagggctc accgcccgtg agcacaatcc agcctctttc cgcgacgagc
      361 cgccccagct tctcagcagc ggcatagcta gcgggagtgg gggcggccgc gcccatgatt
      421 ccaatcacag gcgtccgcat cgactagcgc atggcggcgg tcatcccacc atccacgata
      481 agagaatggc cggtgacata cgatgctgcc tccgagcaaa gccaaacggc cgccgccgca
      541 gcttcctccg gggcaccgat ccgacgcagc ggaacgagcg cggtataccc ctcctccacc
      601 ctcgccgcac cctccgcgga tccagcgccg gccacctcga agacccgctc cagcattggg
      661 gtgcggaacg cgcccgctac cagcgcattg acccggatac cgcgccctgc gtactcctgc
      721 gcggcggatt tggtgagggc aagaaccccg gcctttgccg ccgagtacaa cgaaccgcct
      781 gccgagccgc ccagcccgtt caccgacgag gtgtttacga tggcgcctcc tgcagggttc
      841 tgcgcgagca tctgccggat ctcctgcacc atgcacagcc agacactctt caggttcatc
      901 gagatcgcgc gatcaaactg ttcttcggtg aagtcagccg tcatcgcgaa cgccccatcg
      961 accgttgcgg cgttgttgaa ggcggcatcg agcctgccat acgcggccac ggtgtccgag
     1021 atcagccgct caacgtcgct gcgtcggctg acatcggccc ggaggaaacg aacgtcgccc
     1081 ccttcctttc ggagggcagc ggcggcgtcc tcccctcgct cctggccgcg agcagccaac
     1141 accacccgcc atccggcccg ggcgaacgcc tggcccgctg cgcggccgat gccggagctg
     1201 ccgccggtaa tgagcaccac tctgttctgg acagcctcca taggaggttc tgttggagtg
     1261 tgctccgtta ttggtcgatc gtgtgagctc atttccggga agagctggct ggacggagca
     1321 gccaccagat caacgctgca atcgccaggc tgagaaccgc gatgccgagg tctctcagga
     1381 agtagccatg aagctcggct gcattcggtg aagccgccgc agccacttgc cattctcgcc
     1441 aggtctgcgc cgcatcgacc acccggctcc ccaccaggaa acccgccagc agaacgacga
     1501 tgtatcgcag cacctgcatt ggccaccccg gtctgacgcc caagcgtatt gacaggatta
     1561 ccctaggggg gtatatattg tgcgtcgcga gccaccgtgg aagaagagat ggcgctgccc
     1621 ggcgaccatt ccatcgcgac ctgtagccgt cgttcatcgg ctcagtaaca ccacttacca
     1681 catcgacttc cggccggttt t
//
LOCUS       DASRPQ010000490         2525 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_684589, whole genome shotgun sequence.
ACCESSION   DASRPQ010000490 DASRPQ010000000
VERSION     DASRPQ010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2525
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_684589"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(632..>2525)
                     /locus_tag="VFD73_05825"
     CDS             complement(632..>2525)
                     /locus_tag="VFD73_05825"
                     /inference="COORDINATES: protein motif:HMM:NF033527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HZI73537.1"
                     /translation="LLALMPAEHDLFPSRAAGVRWQLHEKARHVRPLLKALLTLPLAG
                     DEPAPLVRACAQLRDLYQRPVRALPVPCESSFAPRWTALVDQPDRHRALRAFEAATLF
                     ALRQALRNGSVWLEHSLAFRQRDAMLIPEAEWTTHHRRFYAQLGLPLDAAHYTPQLLA
                     NLEAGLVSLAEAVDAGVVGVDDRGLHLKALDAEETPPQLGATRDTIFQEVGTIQLPEL
                     LLAVDHATRFSWRLLGRAPTTERELLLVYAALLAHGTELNAASVALMIPGLAPEAIAE
                     AMRLLEEEGPMREANDLVVQFLHRHEIVKTWGEGTLASADAMSLDASRHLWNARVDPR
                     RRTYAMGIYAHVLDQWGIIYDQPLVLHQRQVGAAIEGMVRQNAAGPVERLAVDTHGYT
                     DFGMAISKLLGCDLCPRLSHLRDRRLHVPRDITVPAALHPVVDPDVSVSQVEASWDQL
                     IRVTASIEGGWLSAVLALTRFGAAARADPIHKAGNALGKLLRSLFLCDYLSNEGFRRE
                     ILRILNRGESVHTLQRIIHYGSIAAARGRRHEELLAISGSLTLLTNMVMAWTTQRMQH
                     VLDTWQRTGTRRVEPDLLRHIGPMHFQNINFRGEMAFPLARYRSRLIPGLSAKTGHGT
                     HGTDGS"
BASE COUNT          507 a          789 c          800 g          429 t
ORIGIN      
        1 aaggccgtcg cctgcggaaa gacggctgct ggtgctgtgg cctctgtcaa gaacatccct
       61 tcctgagcgg acaactcacc agggaggaat ccggtggcgt ggatcatgag accgagcaca
      121 aacgtgcggc gcgacaacac agacggcctc ccccgtttaa aaaccaaacg caatgcccac
      181 cagaaaggca ttggcggttt tttcgtctgg ttgggctggc aggaaattcg tgagacctgc
      241 gagagaaccc gaaccgttcg acgtaaacgt ccggatactg ttggtcaacc cctcgtagga
      301 gactaaagca cctcccagac gtgcttctct acttttggta ttacagtact aatttttgta
      361 gtagaaaata gcaataggct gcctgcatcg agcgaagcaa tcggggagag gagtatgtgc
      421 gcggttcaga ctgagggggt ctccgagggc aggtcatgca caggcgccag tgccgcaaag
      481 cgcgaggtcc gcgtcgtagc ccgtggacgc tcctcgagcc ggggtacccg tacaatcgat
      541 gcagaaagtc ccgattttaa gcgcgtgtaa aatcagacac ttagaagagc gcaaaggctg
      601 tttggccaaa tgaatcaagg acttgctgcc cttatgatcc atcagtcccg tgtgtcccat
      661 gtcccgtctt tgcggacagc cccgggatca gacgactccg gtagcgtgcc agcggaaacg
      721 ccatctcccc acgaaagttg atgttctgaa aatgcatggg gccaatgtgg cgcaacaggt
      781 ctggctcgac gcgccgtgtc ccggtccgct gccacgtatc caagacgtgt tgcatgcgct
      841 gggttgtcca ggccatcacc atattggtga gcaaggtgag cgagcccgaa atcgccagga
      901 gttcttcgtg ccgtcggcct cgcgcggcgg caatgctgcc atagtgaatg atgcgctgga
      961 gcgtatggac cgattcgccc cggttgagga tacgcaagat ctcgcggcga aacccctcgt
     1021 tgctcaggta atcgcacaga aagagactcc gcaagagctt ccccagggca ttccccgcct
     1081 tatggatggg atcggctcgt gctgcggccc caaaccgggt gagggccagc accgcggaga
     1141 gccagccccc ctcaatcgat gccgttaccc ggatgagttg atcccaactc gcctcgacct
     1201 gcgataccga gacatctgga tcgaccacgg ggtggagggc cgccggcacg gtgatgtccc
     1261 gtgggacatg cagccgacgg tcccggagat ggctcaaccg cggacagaga tcgcagccca
     1321 agagtttgct gatggccatg ccaaaatccg tatacccgtg ggtatccacg gcaagccgtt
     1381 cgactgggcc cgccgcgttc tggcgcacca tcccttcgat cgcggccccg acttgtcgct
     1441 ggtgtaagac gagcggttga tcgtagatga tgccccactg atccaggaca tgcgcataga
     1501 tgcccatggc gtaggtccgc cgccgcgggt ccacccgggc attccacaga tgccgggacg
     1561 catcgagact catcgcatcg gcggaggcca gcgttccctc gccccaggtt ttgacaatct
     1621 catgccgatg cagaaactgc acgaccaagt cgttggcttc gcgcatgggg ccttcctctt
     1681 cgagcagccg catggcctcg gcaatggcct caggcgccaa gcccgggatc atcaaggcca
     1741 ccgacgccgc gttcagctct gtcccgtggg ccaggagggc cgcatacacc agcagcaact
     1801 cgcgctccgt ggtcggggcc cgccccagga ggcgccaact gaaacgtgtc gcgtgatcca
     1861 cggccagcag caactcgggc agttggatcg tccccacctc ctgaaagatg gtgtcgcggg
     1921 tggcccccaa ctggggcggg gtctcttcgg cgtccaaggc cttcagatgc agcccgcggt
     1981 catctacgcc cacgacgcca gcgtctacgg cttccgccag ggacaccagg cccgcttcca
     2041 gattggcgag cagctgaggg gtgtagtgcg cggcgtcgag cgggagaccg agctgggcgt
     2101 aaaagcgccg atgatgggtg gtccactccg cctcaggaat gagcatcgca tcccgctggc
     2161 gaaaggccag gctatgctca agccacacgg agccattgcg gagcgcctgg cgcaacgcga
     2221 agagggtggc cgcctcaaac gcccgcagcg cccggtggcg gtccggctgg tccaccagtg
     2281 ccgtccagcg gggagcaaag ctgctctcgc agggcaccgg caaggcccgg accgggcgct
     2341 gatagagatc gcggagctgg gcgcaggcgc gcacgagcgg ggccggctcg tcgccggcca
     2401 acggcagcgt gaggagggcc ttcagcaatg ggcgaacgtg acgcgccttc tcgtggagct
     2461 gccagcgcac cccggctgcc cgactgggaa acaggtcgtg ctccgccggc atcagcgcca
     2521 ggaga
//
LOCUS       DASRPQ010000491         1024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4130996, whole genome shotgun sequence.
ACCESSION   DASRPQ010000491 DASRPQ010000000
VERSION     DASRPQ010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4130996"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..575)
                     /locus_tag="VFD73_05830"
     CDS             complement(<1..575)
                     /locus_tag="VFD73_05830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73538.1"
                     /translation="MIRVAALETHRLPETAFAALAGGEGDSDVIRLLREAQRSKHTML
                     VHAIAGAAGDADPADPGVAAFRAGYELLTRVQEADPATWTWLIGLPHIGGWANDGLIR
                     LDRDAPPDFAYLACAAASAAVRAGIPFELDVPIRDGHVLLPGLGRIAVTGETVSDEPT
                     WIRLRYDGDHLVAGNDVTLTQAAVTPDYGLA"
BASE COUNT          193 a          307 c          332 g          192 t
ORIGIN      
        1 tgtgccagcc cgtagtcggg ggtcacggcg gcctgggtaa gcgtcacgtc gttgccagcc
       61 accagatgat cgccgtcgta gcgcagccgg atccaggtcg gctcatcgct aaccgtctcg
      121 ccggtgaccg ctatccggcc caggccgggc agcaggacgt ggccatcgcg gatcgggacg
      181 tccagctcga aggggatacc tgcccggacc gccgccgagg ccgccgcgca ggccaggtag
      241 gcgaagtccg gaggcgcgtc ccggtccagg cgtatcaggc cgtcgttggc ccatccgccg
      301 atgtgaggca ggcctatcag ccatgtccaa gtggccggat cggcttcttg gacccgggtg
      361 agcagctcgt agccggcccg gaaggcagcc acaccggggt cggctggatc agcgtcccca
      421 gcggccccgg cgatagcgtg caccagcatg gtgtgcttgc tccgctgcgc ttcgcgcagc
      481 aggcgaatga cgtctgagtc tccctcgccg ccagcaaggg cggcgaatgc cgtttccggc
      541 agtctgtggg tctcgagcgc ggcgacccgg atcatcggtt tttatatcct cgcattaaag
      601 gagctgagcg gcacgccatt cttcttcagt cgctcccggt agagcgctat agagtgtgcg
      661 agcggggagg tgccaagttc tgccagctga tccagctgaa tatcttccaa gttagggatt
      721 gccgtcttca tgtcttgctg tattataggc atatgtatct ccggatatag agccattaaa
      781 aggcgagacc gctctcgtcg aggctctgat gctgctcgca cggaccacgg actcaagacg
      841 gcatgatgtc atacagcacc gagctttgag accgcggagg ccccgagatg cagctaacca
      901 gagccggccg gatgtgtgct cggagtaatg aaccgagcga cgaagtaaga cacccgtgga
      961 cgaaacaaga cagattgtga gtgttctgtc gttctggtga gacccaattg taacacgagg
     1021 ctta
//
LOCUS       DASRPQ010000492         3151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2878185, whole genome shotgun sequence.
ACCESSION   DASRPQ010000492 DASRPQ010000000
VERSION     DASRPQ010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3151
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2878185"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1677)
                     /locus_tag="VFD73_05835"
     CDS             complement(<1..1677)
                     /locus_tag="VFD73_05835"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:NF012532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HZI73539.1"
                     /translation="MTHTLLEPFSSVGLPESPDPASASAAAYANEVVELLSGLLLGLV
                     RDRQPEVESVLRGERPPAELSPELLARTLQVQGIWFQLLSIAEQNAAMRRRRQIEAER
                     GQDQLRGTFAHVIGEAAVARVPPQSLRDLLEVLRVRPVITAHPTEAKRVTVLEKHRRI
                     YRRLVDLESPRWTPRERQSLIDRLRNEIELLWTTGELRLAKPTVPQEVFWGLHFFNET
                     LFEAVPDLLDKLERALALSYPEERFQVPPFLQFGSWVGGDRDGNPFVTNQVTRSTLLE
                     NRLTALRRYRRRLADLVGALSITERAIAVSDTFRAALTRALEASGDGEGIAARNPGEV
                     FRQLLACMVARVDVMIASAERGQAAAGTAGYQSADALSGDLRLIEDQLVAAGSLSLAA
                     MLVRPVRREVESFRFSTVRLDLRENTTKLNAALADLWRQTDRRTGVPAAGTGPEAPDQ
                     SSEEWRQWISTELARPLSQAARVPELPAESAETLGMFRLVRDLREEIDREAFGSFILS
                     MTRTVSDVLGGYLMAKHAGLFADAPAVESCTLPIVPLFETIEDLQRAPAIM"
     gene            complement(1674..2648)
                     /locus_tag="VFD73_05840"
     CDS             complement(1674..2648)
                     /locus_tag="VFD73_05840"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008465 - glycerate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HZI73540.1"
                     /translation="MTDRPTVVVTRRLPGVVEEELSRDFNATLNRDDRPLGAAGLQEA
                     LRTADALLCTVTDRITAEVLSAEPLRARLLANFGVGFNHIDTDAAKARGIAVTNTPDV
                     LTEATADIAITLLLMVSRRAGEGERHIRCGAWTGWRPTHMLGTQVSGKTLGLVGMGRI
                     ARAVARRAHHGFGMKVIFHDPYPPSASEAAALGAEQKDALEQVLEESDFVSLHCPATP
                     ETRHLMNRERLARMRRSAFLINTARGDIVDEAALVEALADGTIAGAGLDVYEREPQVS
                     PELLTMENVVLFPHLGSATHETRIAMGRRAVENLKLFFSGAPLRDRVV"
     gene            complement(2645..>3151)
                     /locus_tag="VFD73_05845"
     CDS             complement(2645..>3151)
                     /locus_tag="VFD73_05845"
                     /inference="COORDINATES: protein motif:HMM:NF024994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HZI73541.1"
                     /translation="AMLGIMPGHIYSRGSVGLVTRSGTLGYEAAAQMNALGIGQTTSV
                     GIGGDPINGSSFVDMLKLFEEDPETEAVMMIGEIGGPQEAEAALFVKENMSKPVIGYV
                     AGLTAPKGRRMGHAGAIISAFGDTAAEKAEIMRSAGLTVAPSPAELGSTIAAALSKRT
                     SRKKVGVK"
BASE COUNT          540 a         1050 c         1012 g          549 t
ORIGIN      
        1 catgatcgcg ggcgcacgct ggagatcctc aatcgtctcg aacaggggaa cgataggtag
       61 cgtgcagctc tcgaccgctg gggcgtcggc gaagagcccg gcgtgcttgg ccatcagata
      121 cccgcccagc acgtcgctca cggttcgggt catactcagg atgaaggagc cgaacgcttc
      181 ccggtcgatc tcctctcgga ggtcgcgaac caggcggaac attcccagcg tctccgccga
      241 ctcggctggc aattccggca cacgagcagc ttggctgagc ggccgcgcca attctgtgga
      301 gatccactgc cgccactcct cggagctctg atccggcgcc tcgggtccgg tccccgctgc
      361 cggtacgccg gtccgccggt ccgtctgtct ccacagatcg gccagcgccg cgttgagctt
      421 cgtcgtgttc tctcggagat ccagccgaac ggtgctgaaa cggaatgact ccacttcgcg
      481 ccgcaccggt cggaccagca tcgcggcaag ggagagactt cccgccgcga ccagctggtc
      541 ctcgatgagc cgcagatcgc cggacagagc atcggccgat tggtaccccg ccgtccccgc
      601 cgccgcctgg ccgcgctctg ccgaggcgat catgacatcc actcgcgcga ccatgcaggc
      661 gagtagctgg cggaagactt ctcctgggtt gcgagcggct atcccttcac catcgccgct
      721 ggcttcgagt gcgcgagtga gcgccgcccg gaaggtatcg gaaacggcaa tagctcgttc
      781 ggtgatgctg agcgcaccta ccaggtcggc cagccgtcgc cgatagcgcc gcagcgccgt
      841 aagccgattt tccagcagag tgctgcgggt cacttggttg gtgacgaacg ggttcccgtc
      901 acggtcgcca cccacccagg agccgaactg caagaacggt ggaacctgga agcgctcctc
      961 cggatagctc agggccagag cgcgctccag cttatcgagg agatcgggga ccgcttcgaa
     1021 caatgtctcg ttgaagaagt gaagtcccca gaatacctcc tgcggcaccg tgggtttggc
     1081 cagcctgagc tcacccgtcg tccagagcag ctcgatctcg tttcgcagcc gatcgatcag
     1141 ggactgccgc tcacgggggg tccaccgtgg cgactcgagg tccaccaggc gccggtagat
     1201 ccttcgatgt ttctcgagca ccgtcacccg cttggcttcg gttggatgcg ccgtgatgac
     1261 ggggcggacc cggagaacct ccagcagatc ccgcagactt tggggcggca cccgcgccac
     1321 agccgcctcg ccaatcacgt gagcaaaggt gccgcgcagc tgatcctgac cgcgttccgc
     1381 ctcgatctgc cggcggcggc gcattgcggc gttttgctcc gcaatactca acagttggaa
     1441 ccagatgccc tgaacctgca gagtgcgcgc gagaagttcc ggactgagct ccgccggcgg
     1501 gcgttcaccc cggagcaccg actccacttc aggctggcgg tcccgcacca gcccaagcag
     1561 gagtccggag agcagctcga cgacctcgtt ggcgtaggcc gcggcgctgg ccgaggcagg
     1621 atcaggcgac tcggggagac cgaccgaaga aaagggctcg agcagggtgt gggtcacacg
     1681 acacggtcgc ggaggggagc accgctgaag aacagtttca ggttttcgac cgcgcgacgt
     1741 cccatggcaa tacgggtctc gtgcgtggca cttccgaggt gaggaaaaag gacaacgttt
     1801 tccatggtca gcagctcggg gctgacctgg ggctcccgtt cgtacacatc gagcccggcg
     1861 ccagcgatag taccatctgc cagcgcctcg accagagcag cttcgtccac gatgtcgccg
     1921 cgcgcggtgt tgatgagaaa cgcgctccgc cgcattcggg ccagccgttc ccgattcatc
     1981 aggtgacggg tctctggggt ggcggggcag tgcaatgaga cgaagtccga ctcttcgagc
     2041 acctgctcca acgcgtcctt ctgctcagcc ccgagcgcgg cagcctcgct ggcagacggt
     2101 gggtagggat cgtgaaagat gaccttcatc ccgaacccgt ggtgagcccg ccgtgcaacc
     2161 gcgcgggcga tgcgacccat gccgaccagc cccagcgttt tcccgctcac ctgcgtcccg
     2221 agcatgtggg tggggcgcca tccggtccag gcaccgcagc ggatgtgacg ctcgccttcg
     2281 ccggcgcggc ggctgaccat gagtaacaat gttatggcga tgtcggcggt cgcctcagta
     2341 agaacgtccg gcgtgttggt gacggcgatc cctctggcct tggccgcgtc ggtatcgatg
     2401 tgattgaagc caaccccgaa gttggccagg agcctggctc gcagcggttc cgcgctgagg
     2461 acctcggcag tgattcggtc ggtcacggta cagagcaagg catcggcagt ccggagggcc
     2521 tcctgcagcc ccgccgctcc cagcggccga tcgtcacggt tcagcgtggc gttgaagtct
     2581 cggctgagct cttcttccac gactcccggg aggcggcggg taaccaccac agtcgggcgg
     2641 tcggtcactt caccccgacc ttctttcgcg aggtgcgctt ggacagggct gccgcaatgg
     2701 tggatccgag ctccgccggg ctgggagcaa cggtgagacc ggcagagcgc atgatctcag
     2761 ctttttcggc cgccgtatcg ccgaaggcgg agataatcgc acccgcgtgg cccatgcgac
     2821 ggcccttggg cgcggtcaaa cccgcgacgt atccgatgac cggcttgctc atgttctcct
     2881 tcacgaagag agcggcttcg gcctcctgcg gcccgccgat ttctccgatc atcatcacag
     2941 cttcggtctc gggatcttcc tcgaacagct tcagcatgtc cacaaacgag ctgccgttga
     3001 tgggatcgcc cccgatcccg acgctcgtgg tctggccgat gccgagcgcg ttcatctgcg
     3061 cggctgcctc atagcccagc gtcccggacc gggtcaccag gcctacgctt ccccgagaat
     3121 agatgtggcc gggcatgatg ccgagcatgg c
//
LOCUS       DASRPQ010000493         2128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_684749, whole genome shotgun sequence.
ACCESSION   DASRPQ010000493 DASRPQ010000000
VERSION     DASRPQ010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2128
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_684749"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..219
                     /locus_tag="VFD73_05850"
     CDS             <1..219
                     /locus_tag="VFD73_05850"
                     /inference="COORDINATES: protein motif:HMM:NF013999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein"
                     /protein_id="HZI73542.1"
                     /translation="LVYEAESDQAGNVRVEMTLTSPGCPAGGEIIEDVKRVVGDMEGV
                     RSVEVELVWDPYWTPEKMDPRVRAFLGF"
     gene            complement(221..1390)
                     /locus_tag="VFD73_05855"
     CDS             complement(221..1390)
                     /locus_tag="VFD73_05855"
                     /inference="COORDINATES: protein motif:HMM:NF013755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HZI73543.1"
                     /translation="MTAASEQIEPVPLIENQAELERLFRRLKSEPLIALDTEAASFHR
                     FRDRVYLIQVSSRQETAVVDPLAVRDLSVVGEILADPDIEVVFHDADYDLRLLAREYG
                     FQAQNLFDTRISAQLLNEPGVGLAALLEKYFGVRLDKRYQRADWSARPLTPEMLEYAA
                     ADTRYLPALRDRLREQLRATGRLAWAEEEFALLSSESRAVVEPEEPPYLRIKGAKALG
                     RRGLAILRELVQWREDLARRTDKAAFRILSNEPMLFMANSPPQNLNALGEVRGIGREQ
                     LERRGQEIMAAIERGLAVPESELPRVPRPLRKQPDPAYETRLERLKAARNDLAERYQV
                     APGVLCPNGTLEALARVDPSTLEQLAKIRELRQWQLREFGERLLQALQQPLSDQE"
     gene            complement(1432..1602)
                     /locus_tag="VFD73_05860"
     CDS             complement(1432..1602)
                     /locus_tag="VFD73_05860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73544.1"
                     /translation="MKPPTDYIRHAARLARKLQMEGAMGSTPQPDAEFYKALSKAFDE
                     IAAGLELVGKPD"
     gene            1726..>2128
                     /locus_tag="VFD73_05865"
     CDS             1726..>2128
                     /locus_tag="VFD73_05865"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HZI73545.1"
                     /translation="MSLPEIDLVVYPDECDAFGHLNQAAFLSLFERARWEMLLRGPGM
                     DVFSRAGTWPALRKTVIDYRAAAFPGDVLRFSQALTHHGRTSFTMRQTARRVRDETLI
                     ASAEFVFVCIDREGRPIAIPPQFSEYMHSRQE"
BASE COUNT          401 a          665 c          649 g          413 t
ORIGIN      
        1 ctggtctacg aagccgagag cgaccaggcc gggaacgtcc gcgttgaaat gacgctgacg
       61 tccccaggat gcccagcagg gggagaaatc atcgaggacg tgaagcgagt agtaggcgat
      121 atggagggcg tgcggtcggt cgaagtcgag ctggtttggg acccttactg gactccagaa
      181 aaaatggatc cgcgggtgcg ggccttcctc ggcttctgat tcactcttga tcagataaag
      241 gctgctgcag agcctgcagt agcctctctc cgaattcacg cagctgccac tggcgcagct
      301 cccgaatctt cgccagctgc tccagcgtag atggatcaac ccgcgccaat gcttccaggg
      361 tgccgtttgg acagagtacc ccgggagcaa cctgataccg ctcagccaag tcattccgcg
      421 ccgcttttag tcgctcgagc cgtgtctcgt aggcgggatc gggctgcttt cggagcggac
      481 gcggcacccg gggaagctca ctctccggaa ccgccagtcc ccgctcgata gcggccatga
      541 tctcctgccc cctccgctcc agctgttctc tcccgattcc tctgacttct ccaagtgcgt
      601 tcaggttttg gggaggcgag tttgccatga acagcattgg ctcattgctg aggatccgga
      661 acgccgcctt gtccgtgcgc cgggccaggt cctcccgcca ctgaaccagc tcgcgcagga
      721 tggccagccc tcggcgtccg agcgctttag cccctttgat gcgaaggtag ggcggctcct
      781 ccggctcgac gaccgctcgc gattccgagc ttaacagcgc aaactcctcc tctgcccacg
      841 ccagtcgtcc agtagcgcgg agctgctccc gcagtcgatc gcgcagagca ggaaggtacc
      901 gggtatctgc cgcggcatac tcgagcattt cgggcgtgag cggcctggcc gaccagtctg
      961 cccgctgata gcgcttatcc aagcggaccc cgaagtattt ctccagaaga gcggccaaac
     1021 cgacgcccgg ttcattgagt agctgggcgg aaattcgggt gtcaaacaga ttctgcgcct
     1081 ggaaaccgta ctcccgagcc agcagccgca gatcatagtc ggcgtcgtga aagaccacct
     1141 cgatgtccgg atctgcgagg atctctccca ccacactgag atcacgaacg gcgagggggt
     1201 ccaccaccgc cgtctcctgg cgggaagaga cctggatcag atacacccga tcccgaaagc
     1261 gatgaaaact tgcagcctcg gtgtcgagtg cgatgagcgg ctctgatttg agccggcgga
     1321 agaggcgctc cagctcagcc tgattctcaa tcaggggaac cggctcgatc tgctcggatg
     1381 cggcggtcac gccgaaaggt tgcgacctgc aggctcgggg cgcaacgctg gtcagtccgg
     1441 cttgcccacc agctccagcc cggcggcaat ctcatcgaac gctttcgaga gtgccttgta
     1501 gaactcggca tcgggctgag gtgtactccc cattgcccct tccatctgaa gcttccgagc
     1561 gagtcgggcg gcgtggcgga tatagtctgt cggtggtttc atggcgagag gcggatcggg
     1621 ccgccggtca gaagggcagg gttgagagat cctagcaccg tagacaccaa catggacggg
     1681 aacataatcg cacccgttgc cctcctgtct cgctattata tccccatgtc tctgcccgaa
     1741 atcgacctgg tggtctaccc tgacgagtgc gacgcattcg gtcacctcaa ccaggccgca
     1801 tttctcagtc tgttcgagcg tgcccgctgg gagatgctgc tgcgagggcc cggaatggac
     1861 gtgttcagcc gcgcagggac gtggcccgcc ctgcgcaaaa cggtgatcga ttatagggca
     1921 gcggcttttc ctggggacgt cttgcggttt tctcaggcat tgacccatca cggacggacc
     1981 agctttacca tgcggcagac ggctcggcgg gtacgcgatg agacgctgat cgccagtgcg
     2041 gaatttgtct tcgtctgcat tgaccgagag ggccggccaa ttgcgatccc cccacagttc
     2101 agcgagtaca tgcactcgcg ccaggagt
//
LOCUS       DASRPQ010000494         2593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1624568, whole genome shotgun sequence.
ACCESSION   DASRPQ010000494 DASRPQ010000000
VERSION     DASRPQ010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2593
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1624568"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1594)
                     /locus_tag="VFD73_05870"
     CDS             complement(<1..1594)
                     /locus_tag="VFD73_05870"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI73546.1"
                     /translation="MRTELRLLRLIRPYRGLLGLGLITTFLASLLDGFTLVILIPLLK
                     HLFGTAGQLRTGSTRLEAVIDRLIEPLVAGLSPGQAAGRLVVLLALGLLLKNVMSYAS
                     TQISVRAQEGLVRDLRSRLFEHLLTLDLSFFQRTRAGQLISAMITEVDQTKTVITTSL
                     ISFFQNLVVVGTTLVILTQISVRLTILTLAFVPFLILGLQILLRRLRSHAQARARERG
                     EITATVTERLGAIRLIRAYGEERRESERFATQTDRYRKRVIRTQRFSSLTSPLTEVFS
                     GFLVILIIWAGTRPSLVGLGTPLAPEAIIVFLMAALRLASPLKTIASFPAAMAVTLAS
                     AERVFEFLDQPPSEVDRPDEHEARFEREIVFDRVSFRYGDGDLVLSEVSFRLPKGKVI
                     ALVGPSGAGKTTIADLLPRFYDPTDGQILMDGVPLTRIRRGSLRALLGVVSQDTVLIN
                     DSVRANIAYGSPQASREQVEDAARAANAAGFIETLPNGYDTTLGERGTRLSGGQRQRI
                     AIARALLRDPPILILDEATSALD"
     gene            complement(1598..>2593)
                     /locus_tag="VFD73_05875"
     CDS             complement(1598..>2593)
                     /locus_tag="VFD73_05875"
                     /inference="COORDINATES: protein motif:HMM:NF020249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PglZ domain-containing protein"
                     /protein_id="HZI73547.1"
                     /translation="FARYLQRNYAKWLHQGDSDRPPLSVDIGAEFLRPVLDLHGRVML
                     VVVDCLRLDQWAMIRPLISARFDIETAHYFSILPTATPFARNAIFSGLFPAEIKARYP
                     RWWNDHEDASLNSHEAELLSEHMRELTGRSIPVHYEKVFTAADGEGLLKRLPAHLAQD
                     GVTALVFNFIDQLTHGRTENSTLYEVARDTPALRNLTRTWFERSPLWDALREAERRGV
                     PVLLTTDHGSIHCHTPATVFAKRDTTSNLRYKFGDDLRAQDPDSAVVVEDLPSFGLPA
                     RAPGTRLLLATGDRFFVYPTKLREYQARYRGAFLHGGVSPEEVLLPIALLTHRQG"
BASE COUNT          518 a          800 c          857 g          418 t
ORIGIN      
        1 tgtccagtgc gctggtggcc tcgtcgagaa tcaggatcgg agggtctcga agcagtgccc
       61 gggcaatcgc gatccgctgg cgctggccac cggagagccg ggtgccgcgc tcacccagcg
      121 tggtatcgta gccgttcggc agagtttcga tgaacccagc cgcattggcc gcccgggccg
      181 catcttcgac ctgctcgcgc gaggcctgag gtgagccgta ggcgatgttg gctcgaaccg
      241 aatcgttgat cagtactgta tcctgactga cgaccccgag gagagcgcgc agagagcctc
      301 ggcgaatacg ggtaagcgga accccgtcca tcaggatctg cccatcggtc gggtcgtaaa
      361 agcgcgggag caggtcggcg atcgtagtct tcccggcacc agacggaccg accagcgcga
      421 tcaccttccc cttcggcaac cggaaagaga cctcactcag caccagatcg ccgtcgccgt
      481 accggaagga gacccgatcg aacacgatct cgcgctcgaa gcgggcctca tgttcatcag
      541 gacggtccac ctcgctgggc ggctgatcca gaaattcgaa gacacgttcc gcgctcgcca
      601 gcgtcacggc catcgcggct ggaaacgatg cgatagtctt gagcggagag gccagccgca
      661 gcgccgccat caggaagaca atgattgcct cgggagcaag cggggtaccg aggcccacca
      721 ggctcgggcg ggtcccggcc cagatgatga ggatcaccag aaaaccggag aacacttcgg
      781 tgagcggact ggtgagagaa gagaagcgtt gggtccggat cacccgtttg cgatagcgat
      841 cggtctgcgt ggcgaatcgc tccgattccc ggcgctcctc tccgtacgcc cggatcagcc
      901 ggatggcgcc cagccgctcg gtgacggtcg ccgtaatttc gccgcgctcc cgagcgcgcg
      961 cctgggcgtg actccgcagc cggcgcaata agatctggag gcccaggata agaaatggaa
     1021 cgaacgccag cgtcaggatg gtgagtcgaa ccgaaatctg agtcaggatc acgagcgtcg
     1081 tgccgaccac caccaaattc tgaaagaagg aaatcaacga ggtggtgatg acggtcttgg
     1141 tctggtccac ctcggtgatc atcgccgaga tgagttggcc cgcccgggta cgctgaaaga
     1201 agctcaggtc gagcgtcagc aggtgctcga agagccggga gcgaaggtcg cgcaccagcc
     1261 cctcctgcgc gcgcaccgag atctgggtag acgcgtagct catgacgttc ttcagcaaca
     1321 agccaagcgc cagcagaacc accagtctcc ccgctgcctg gccgggtgat agtcccgcca
     1381 ccagcggctc gatcaaccga tcgattaccg cctccagtcg agtcgacccg gttcgtagct
     1441 gtcccgcggt gccgaacagg tgcttcagga gcgggatgag gatgacgagc gtgaaaccgt
     1501 cgagcagcga ggcgagaaag gtggtgatca gcccgaggcc gagcagcccg cgataggggc
     1561 ggatcagccg gagcagcctg agctcggtgc gcaccaccta gccttgccgg tgggtgagca
     1621 gggctatcgg gagcagcacc tcttccggcg agactccacc gtggaggaag gctccccgat
     1681 agcgcgcctg atattcccgg agcttggtcg gatagacgaa gaaacgatcg ccagttgcca
     1741 gcaggagtcg ggtcccgggc gcgcgtgccg gaagaccaaa gctggggagg tcctccacca
     1801 ccaccgctga atcggggtct tgggcccgca aatcgtcccc aaacttgtag cgcaggttcg
     1861 aggtggtatc ccgcttggca aagactgttg ccggggtgtg gcagtggatc gacccgtgat
     1921 cggtcgtcag cagcacggga accccacgac gctccgcctc ccgcagggca tcccagagcg
     1981 gcgagcgctc gaaccaggtg cgggtcaggt ttcgcagcgc cggcgtgtcc cgcgccacct
     2041 cgtagagagt ggagttttcg gtacgcccat gggtgagctg gtcgatgaag ttgaacacca
     2101 gcgcagtcac gccgtcctgt gccaggtgag ccggcagccg cttcagcaac ccctcaccgt
     2161 cggcggcggt gaacaccttc tcgtaatgaa ccggaatgct tcggccggtg agctcgcgca
     2221 tgtgctcgct gagcagctcg gcctcatgcg agttgaggct cgcgtcctcg tgatcgttcc
     2281 accagcgagg gtatcgcgcc ttgatctcgg ccgggaagag gccgctgaag atggcattac
     2341 gcgcgaacgg agttgcggtg ggcaggatag agaagtaatg cgcggtttcg atatcgaatc
     2401 gcgcgctgat caggggacgg atcatcgccc actggtccag ccgcaagcag tccaccacga
     2461 ccagcatcac ccttccgtgc aggtccagca ccggacggag gaactccgct ccaatgtcca
     2521 cggaaagcgg tgggcggtcg ctatcgccct gatggagcca cttggcatag ttgcgctgga
     2581 gatagcgggc gaa
//
LOCUS       DASRPQ010000495         1097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3822016, whole genome shotgun sequence.
ACCESSION   DASRPQ010000495 DASRPQ010000000
VERSION     DASRPQ010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3822016"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(54..127)
                     /locus_tag="VFD73_05880"
     tRNA            complement(54..127)
                     /locus_tag="VFD73_05880"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(91..93),aa:Ile,seq:gat)
     gene            complement(419..>1097)
                     /locus_tag="VFD73_05885"
     rRNA            complement(419..>1097)
                     /locus_tag="VFD73_05885"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          198 a          371 c          329 g          199 t
ORIGIN      
        1 gcttgcgtca gtctccgacg gatttttgct ttcggcgtcg ccgaaagcaa aaatgggcca
       61 gggaggactt gaacctccga ccccacgctt atcaagcgtg tgctctaacc aactgagcta
      121 ctggccccaa accccggcct cgccagggcc caagggggcc ccagcgcccc gccggggcca
      181 gatcacggaa tgggagaagg atgcgcggac ggcgccggcc ccagaggggc cgggcaggcc
      241 gcacgagatc gcctgatggc cagcgggact ggccggacgc gatggtggtg gattgggatg
      301 ggcctccccc aggcctccat ccggagacgc cgggagccgg cctcgcccgc gggcgagtgt
      361 agtctgttcg gacccatgca gccgagagcc gaggccctca ccccacacgg gttccttgaa
      421 aggaggtgat ccagccgcag gttcccctac ggctaccttg ttacgacttc accccagtca
      481 ctgaccctac cgtggcaagc tacctccctt gcgggttagc gcacctgctt aaggtagaac
      541 caactcccat ggtgtgacgg gcggtgtgta caaggcccgg gaacgtattc accgcggcgt
      601 gctgatccgc gattactagc gattccacct tcacgcaccc gagttgcaga gtgcgatccg
      661 aactgagacg gcttttgggg atcggctggg cctcgcgacc tcgcttccca ctgtcaccgc
      721 cattgtagca cgtgtgtagc ccagcccata agggccgtga ggacttgacg tcatccccac
      781 cttcctccgg cttgtcaccg gcagttcctc cagagtgccc accccaacgt gctggcaact
      841 gaaggcgagg gttgcgctcg ttgcgggact taacccaaca tctcacgaca cgagctgacg
      901 acagccatgc agcacctgtg cagccggccc cttgcgggga aaggccatct ctgacccggt
      961 ccggcccatg tcaagggctg gtaaggttct gcgcgttgct tcgaattaaa ccacatgctc
     1021 caccgcttgt gcgggccccc gtcaattcct ttgagtttca accttgcggc cgtactcccc
     1081 aggcggtgcg cttaccg
//
LOCUS       DASRPQ010000496         3311 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1625051, whole genome shotgun sequence.
ACCESSION   DASRPQ010000496 DASRPQ010000000
VERSION     DASRPQ010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3311
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1625051"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..581
                     /locus_tag="VFD73_05890"
     CDS             <1..581
                     /locus_tag="VFD73_05890"
                     /inference="COORDINATES: protein motif:HMM:NF013143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HZI73548.1"
                     /translation="EAIIGIVYVMASAAAILVADRTPRGGEAIKDILVGSLLWVTWPT
                     ILRLAAVYAAIGIFHWALRRRFLTISFEPETALGRGWKIRWWDFLFYLSFGIVITFSV
                     PIAGVLLVFSFLVVPAAAAFQFTRRQGTLALISWLAGALASAVGLWISFHYDLPTGPV
                     IVCVFGLVLLGAYLLRRALGARVPALVGERTA"
     gene            complement(723..2279)
                     /locus_tag="VFD73_05895"
     CDS             complement(723..2279)
                     /locus_tag="VFD73_05895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HZI73549.1"
                     /translation="MDDTPLVPILRTDDGQVDPVALETWHEALSNTVAVEVPHDLMGL
                     WLYPAQGGVVLLAPSELAQDDLIVPVPAHQLNPEQLSALEDVVKKAGYGSVTCLPVRF
                     GKRDVALLLVANLEPNRYGEVERSVLQCVAQRIGPLLGRVARQWKLGEGRSSLQQERI
                     AGLLETVARANREAGTPQRFIATLSQGLAALLPHEHIELLLPDKTRGGYFRLGDHAGG
                     ALWSDPSLIIDAEHLNIADIFGARSRLLVADTYEDGRWPRGFLTASEPAGADIRALVG
                     ARLNLRGKTSAYLLVGSIGPDLYGEDDLELLFLLAGLITPQIAGFIPTEQPPAQAPAQ
                     PAAPKPSAAPAAPPEHEAYTELLSRVAGLLATTADWSVVTQLVASEAISVLPCDKLTF
                     VLRVTGGERVVVLDPGERRPLSSLPLISVTGTALARVLQGSLPCAFEQHDAETRLSVP
                     LRVAGRIHGALTFSATAPKNLTERHVVPIQHLADIVAAHLELLRRTSLQPHPTVSQWR
                     QKKEVRSGER"
     gene            2529..>3311
                     /locus_tag="VFD73_05900"
     CDS             2529..>3311
                     /locus_tag="VFD73_05900"
                     /inference="COORDINATES: protein motif:HMM:NF012621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HZI73550.1"
                     /translation="MTTTHTDATVLPDTQEARDQCTIAVTGMHCAGCSSRVQRTLEQM
                     PGVIRANVNLMTGAATVNYDPATVSADQLLAAIRETGYGAELPPREVSAEETLAVEDR
                     ARSAEIGDLRRKFQVSIVAAVLAMIFSMPLSHGAGASTTDPVLRLMMPLNRLLEQVFP
                     GIARVPADVWRYLLLALTIPVVGWAGRHFYVRAWSALRHRIADMNTLIALGTGAAFLF
                     SLAMTLGDDWFASRGVAPQVYYEAVVWIIALILLGNLLEARAK"
BASE COUNT          561 a         1062 c         1068 g          620 t
ORIGIN      
        1 aggaagccat catcggaatc gtctacgtga tggcctccgc cgccgccatc ctggtagcgg
       61 accgcacccc gcgcggtggc gaagcgatca aggacattct ggtggggagt ctcctctggg
      121 tcacctggcc gaccattctc cggctcgctg cagtgtacgc ggccatcgga atctttcact
      181 gggcgctccg ccggcggttt ctcaccatct ccttcgagcc cgagactgcg ctggggcgtg
      241 gctggaagat tcgctggtgg gatttcctgt tttatctctc cttcggcatc gtgatcacct
      301 tctcggtccc gatcgccggc gtgctcctgg tcttctcgtt tctggtcgtc cctgcggcgg
      361 cagcgtttca gttcacccgg cgacagggca ctctggcgct gatctcctgg ctggcaggag
      421 ccttggcgtc ggccgtggga ctctggatct cattccacta cgacttgcct acgggcccag
      481 tgatcgtgtg tgtctttggg ctcgtcttgc tgggagcgta tctgctgagg cgggcactgg
      541 gagcgcgagt accggcgctg gtgggggaga ggacggcgtg aggggcggtc aggcggtcag
      601 gcggtcaggc ggtcaggcgg tcagttcgag cgtcgcaaga aatcgcaacg tttgattgga
      661 tgatcgggcc ctggcgtcct cggaatgacg cgacactgcg ccggaccgcc cgaccgcccc
      721 gttcaccgct caccgcttct tacctccttc ttttgtctcc actgcgacac cgtgggatgc
      781 ggctgcagcg aggtgcggcg gagcagctcc agatgggcgg caacgatatc ggcaagatgc
      841 tggatcggca ccacgtgacg ctcggtcagg ttcttgggtg ccgtcgcgct gaaagtgagc
      901 gcgccatgaa tcctgccagc cacgcggagc ggcaccgaaa gccgagtctc cgcgtcgtgc
      961 tgctcgaagg cacagggcaa gctcccttgc agcactcggg ccagcgccgt ccccgtcacc
     1021 gatatgagcg gcaagctcga aagcgggcgg cgctcgcccg gatcgagcac gacgacgcgt
     1081 tctcctccgg tcacccggag cacgaacgtc agcttgtcgc agggcagcac gctgatcgct
     1141 tcgctggcaa ccagctgagt caccacggac caatcggcag tggtggccaa gagtcccgca
     1201 acccgggaaa gcagttcggt gtaggcctcg tgctccggcg gtgcagccgg tgctgctgaa
     1261 ggtttcggag cggctggctg agctggtgcc tgagctggtg gctgctcggt cgggatgaac
     1321 cccgcgatct gcggcgtgat caatccggcc agcaaaaaca gaagctccag gtcgtcctcg
     1381 ccgtataagt ccggcccaat actcccgacc agtagatagg ccgacgtttt ccctcgcaga
     1441 ttcaatcgcg cgccgaccag cgcacgaatg tcggcgccag ccggctcgct cgcggtgaga
     1501 aagccacgcg gccaccggcc gtcctcatag gtgtctgcca cgagcagccg gcttcgcgcg
     1561 ccgaagatgt cggcgatgtt caggtgctcc gcatcgatga tgagcgaagg atcgctccac
     1621 aacgctccgc cggcgtggtc ccccagccgg aagtagccac ccctggtttt gtcaggcagc
     1681 agaagctcga tgtgctcgtg aggcagcaac gccgccagtc cctgggagag tgtcgcgatg
     1741 aagcgctgcg gtgtaccggc ctcacgattg gcccgagcca cagtctcgag cagtcccgca
     1801 attcgctcct gctgcagcga cgatcgtccc tctcccagct tccactgccg agcgaccctt
     1861 cccaggagcg gaccgatgcg ctgagcgacg cattgcagca ctgaccgctc gacttcgccg
     1921 tagcgattgg gttcgagatt ggccaccagc agtaaggcca catcgcgctt gccgaacctg
     1981 accggcagac aggtgaccga accgtaaccc gccttcttca cgacgtcctc gagcgcggag
     2041 agctgttccg gattcagctg gtgagcgggc accggcacga tcagatcgtc ctgcgccagt
     2101 tccgacggtg ccagcaagac gaccccaccc tgggcggggt agagccagag tcccatcaaa
     2161 tcatggggaa cctcgaccgc aacggtgttc gagagtgcct cgtgccacgt ctcgagggcc
     2221 acgggatcca cctggccgtc gtcggttcga aggatgggaa ccagcggggt gtcatccata
     2281 gagggcgcga agaggcatga cgtatgcccc tgcaaggcac gcggcaagtg gaagtgcggt
     2341 gactacttag atccaagagc gacgctgctg tctcagaatg cttcggcgtg ggcccgcgtc
     2401 ctgcccgcgt ctcttgcagg tcgctcgttc tatgctcaag attctccaat gcttgacata
     2461 cccccacccc ctactacatt gcacggtgga cagtgtgaga tacccgaggc agtaaccggc
     2521 aaccttccgt gaccacaacc cacaccgatg caaccgtgct tcccgatacc caagaggctc
     2581 gggatcagtg caccatagcg gtgaccggaa tgcattgcgc cggttgcagc agtcgagtgc
     2641 agcgcacgct ggaacagatg cccggcgtca ttcgggcgaa cgtcaatctg atgaccggcg
     2701 ccgcgacggt gaactacgat cccgcgacgg tcagcgcaga tcagttgctt gctgcgattc
     2761 gggagacggg gtacggggcg gaactgccgc cgcgagaggt gtcggccgag gagacgctgg
     2821 ccgtcgagga ccgcgcccgg agcgccgaga tcggcgatct gcggcgcaag ttccaggtga
     2881 gcatcgttgc ggccgtgctc gccatgatct tcagcatgcc actttctcac ggggccgggg
     2941 cctccaccac ggatccggtg ctgcgcctga tgatgccgct gaatcggctg ctcgagcagg
     3001 tatttcccgg aatcgctcga gtgccggcgg atgtctggcg ctacctcctg ctcgcgttga
     3061 cgattccggt ggtcgggtgg gctggacgac atttctacgt cagggcgtgg tccgcgttgc
     3121 ggcatcgcat cgccgacatg aacaccctga tcgcgctggg caccggtgcc gccttcctct
     3181 tcagtctggc aatgacgctc ggcgacgatt ggttcgccag tcgcggcgtt gctccgcagg
     3241 tgtactacga ggccgtggta tggatcatcg ccctgattct cctgggtaat ctgctcgagg
     3301 cccgcgccaa g
//
LOCUS       DASRPQ010000497         1273 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2878680, whole genome shotgun sequence.
ACCESSION   DASRPQ010000497 DASRPQ010000000
VERSION     DASRPQ010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1273
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2878680"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..435
                     /locus_tag="VFD73_05905"
     CDS             <1..435
                     /locus_tag="VFD73_05905"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HZI73551.1"
                     /translation="AMLERVGDKAWHDLLVVHNAAMREQIAHHRGREFDTSGDGFLVL
                     FEGPARAVRCGRGMIRAANALGLHIRVGCHTGEVIFVAGYAHGVAVHTTARVVALAGA
                     DEIYVSSTTRDLLSSSDFTLEPAGSYELKGLTGAREVFRVRA"
     gene            complement(677..>1273)
                     /locus_tag="VFD73_05910"
     CDS             complement(677..>1273)
                     /locus_tag="VFD73_05910"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HZI73552.1"
                     /translation="ELIHPLTRWVMNEALRQAHAWRASGVDLAVAVNLSARNLLDPEL
                     VDTVGGLLQAWATPPEKLILEITERITLTGQDFEVLRLLHGLGVRLAVDDFGTGYSTL
                     TYLRSLPLSEVKIDRSFVTDMITNQDDAAIVQSTIDLGHRMGLTVVAEGVNNAETAEA
                     LAALKCDSLQGFYIGRPMPGSEMTAWVEGLRDRLGLRP"
BASE COUNT          239 a          415 c          392 g          227 t
ORIGIN      
        1 gccatgctcg agcgtgtcgg cgacaaggca tggcacgacc tgctggtcgt ccacaacgca
       61 gccatgcgtg agcagatcgc gcatcatcgg ggccgggagt tcgacacctc cggggacggt
      121 tttctggtcc tgttcgaagg cccggcgcga gcggttcgct gcggccgggg catgattcga
      181 gccgccaacg cgcttggcct ccacatccgc gtcggctgcc acaccggaga ggtgatcttc
      241 gtagccgggt acgcgcacgg tgtggcggtg catacaacgg cgcgcgtcgt cgccctggcc
      301 ggtgcggacg aaatttacgt ctcgagcacg acgcgggatc tgctgagctc aagcgacttc
      361 accctcgagc cagcgggatc ttacgagctc aagggactaa cgggcgcgcg ggaagtgttc
      421 cgcgttcgcg cttgaggttt cgaggccagg gtcggcggtg aggaggcgac ccgcctctca
      481 gcccccttga ggtgctgtca tacccagacc tgcagttgcc tgaggaacca caccactatg
      541 ggcgggagcg gccacctccc catcatcttg tctagcaccg gggacttcga ttgtcatcga
      601 ggctcagcga atcctcgatg aagctcggta acagctgaat gacaaccact cgggtcagcc
      661 tggccgagcg ccttcgtcac ggccgcaggc ccaagcgatc ccgcaatccc tcgacccagg
      721 cggtcatttc cgagccgggc attggacgcc cgatatagaa gccctggagc gagtcacact
      781 tgagagctgc cagggcctcc gccgtctcag cgttgttcac accctcggca acgacggtaa
      841 ggcccattcg gtgccccagg tcgatcgtcg actgcacaat cgcggcgtcg tcctggttgg
      901 tgatcatgtc ggtcacaaat gagcggtcga tctttacctc agaaagcggc aggctcctca
      961 ggtaggtcaa ggtcgaatac cccgttccaa agtcatcgac ggccagccgg acaccaagcc
     1021 catggagcag ccggagaact tcgaagtcct gaccggtcag cgttatccgc tccgtgattt
     1081 ccaaaatcaa cttctccggc ggggtggccc aggcctggag taggccgccg accgtgtcca
     1141 ccagctccgg atccagcaga ttcctggcgg acagattgac ggcaacagcg aggtcgacac
     1201 ctgatgcgcg ccaggcgtgc gcctgcctca gcgcctcatt catcacccat cgcgtcagcg
     1261 gatgaatcaa ctc
//
LOCUS       DASRPQ010000498         1059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_374041, whole genome shotgun sequence.
ACCESSION   DASRPQ010000498 DASRPQ010000000
VERSION     DASRPQ010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_374041"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..>1059)
                     /locus_tag="VFD73_05915"
     CDS             complement(147..>1059)
                     /locus_tag="VFD73_05915"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI73553.1"
                     /translation="VFRNRAPERTSVAVVGTAADSLARALRSQGQIDASVRGDSASRE
                     ALRTGDVALVVISRGDRVEYRYDDTRPESRTARLLVDDALQQANGRRNPVPVSDALVR
                     ERGGRYIDFLVPGLLGMNLMGSGIWGLGFAIVDARKKRLLKRLIATPMQRWQYLASFA
                     LSRLTLLFIEVGLLLGFAVLVFGVPVRGSLPLLILICLLSSLSFASLGLLIASRAQTM
                     EGASGLMNLAMLPMWIFSGVFFSASRFPQAIQPLIQALPLTAVINALRANVLRGAGLP
                     AVASELGIILAWMVVSFALALKLFRWR"
BASE COUNT          233 a          358 c          316 g          152 t
ORIGIN      
        1 cacgccccct cacaacagag gccgcgtagg gcggcatcct cgtacgccgc caccgcggcg
       61 cgaaccagat gctcacgagc tcgttcggcg atctgctggg cctcagaaac cacggctacc
      121 tcgatgtcca cgagagaatg acgtgactag cgccagcgaa agagcttcag cgccagcgca
      181 aaactcacca ccatccaggc caggatgatt cccagctccg aggccacagc cggtagtcct
      241 gctccccgaa gcacattggc acgcagcgca ttgattaccg ccgtcagcgg cagcgcctgg
      301 atcaaaggct gaatggcctg cggaaaacgc gacgccgaga agaaaacgcc ggagaagatc
      361 cacatcggaa gcatcgccag attcatcagg ccggaggctc cctccatggt ctgggctcgc
      421 gaggcgatca agagtccgag cgaggcgaat gataaagagg agagcaggca gatcaggatc
      481 agcagcggaa gcgagccccg gacgggaacg ccaaacacca gcacggcaaa gcccagcagc
      541 agcccgacct cgatgaacag cagagtcaat cgcgacaggg caaacgacgc gagatactgc
      601 cagcgctgca ttggggttgc aatcagacgc ttgagcagtc gcttcttccg cgcatccacg
      661 atggcgaatc ccagacccca gataccactt cccatgaggt tcattcccaa cagccccggc
      721 accaggaagt cgatgtaccg gccgccgcgc tcgcgtacga gtgcgtcact gaccggcacc
      781 ggattccggc gtccatttgc ctgttgcaga gcatcgtcca ccaggagccg agcggtgcgg
      841 ctctccggtc gggtatcgtc gtagcggtat tcgacccgat ctccccggga gattacgacc
      901 agcgccacgt ccccggtccg gagtgcctcc cggctggcgg agtctcctcg gacagaggcg
      961 tcgatctgcc cctgggatcg aagcgcgcgt gccagactat ccgcggcggt gcctaccact
     1021 gccaccgagg tccgttccgg ggcccggttc ctgaagacc
//
LOCUS       DASRPQ010000499         1763 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2878766, whole genome shotgun sequence.
ACCESSION   DASRPQ010000499 DASRPQ010000000
VERSION     DASRPQ010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1763)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1763)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1763
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2878766"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1137)
                     /locus_tag="VFD73_05920"
     CDS             complement(<1..1137)
                     /locus_tag="VFD73_05920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HZI73554.1"
                     /translation="MPAYRSVLALAAISVLGSAPLYADSTLDRLTSTAVDLVSHVRGL
                     LHSAAQGGPVVDLRDLSHPTTIENRLESVLGPGRGYLRVTVAGGTARQGDFNLRASET
                     LTGDLLVVDGTADVYGRLVGNLVTVRGDAVVHPGAVVTGDVLTLGGQVRDDGGEIDGE
                     VRTLASTRLLAPPVAPVVPTLSPLESIFQRGAGVVGVFLSLTVLGFGLVMFGRPNLEI
                     VSDTVSHSFGRAFLTGLLGQILLLPTFGMLVVGLVLSVAGILLLPFAIAVYALLAVVA
                     IVGGYLAVAHAMGETYTRRRMALGVVIGSPNSYRYLLVGLAALAALWLAWAVFGWVPV
                     AGSIIWGAAFFVTWLLGTTGFGAALLSRAGIKENFAGRLLPAEAL"
     gene            complement(1124..1732)
                     /locus_tag="VFD73_05925"
     CDS             complement(1124..1732)
                     /locus_tag="VFD73_05925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73555.1"
                     /translation="MTRPPGDHLSPDEIDSCLSGAPAPEVQQHLDRCQACVEQVRSER
                     EIAELIAGLPLVAPSEGFADRVMASVSVPDPFAIRSLQATRRRLFATPRSFARAASLI
                     LLLAGSMLGSVVWSLTHQATLAAIGSWFLAQGGQALWLSVQGVASTFIEQPWYSTVRG
                     LLDNPGRLALYSGLLSLVYLGGLLALRRLLTAPTQQVAHAGV"
BASE COUNT          379 a          569 c          569 g          246 t
ORIGIN      
        1 gagcgcctcc gccggtagaa gccggccggc aaaattctcc ttgatgcccg ctcggctcaa
       61 cagggcagcg ccgaatcccg tggtacccaa gagccaggtc acgaaaaagg ctgctcccca
      121 gatgatgctt cccgccacgg gcacccagcc gaacacggcc cacgccagcc agagagcggc
      181 cagcgctgcc agcccgacca ggagatagcg atagctgttg ggtgagccaa tcaccacgcc
      241 gagggccatc cgtcgccggg tgtaggtctc gcccatggcg tgagcgactg ccagatagcc
      301 gcccacgatg gccacgaccg cgagcaacgc gtataccgcg atggcaaagg gaagcagcag
      361 aattcccgcc acgctcagga ccagcccaac caccagcatg ccgaaggtgg gaagcagaag
      421 gatctgtccc agcaggccgg tgagaaacgc gcgaccgaaa gaatgggaga cggtatccga
      481 gacgatttcc aggttgggcc gcccgaacat gaccaggcca aagccgagca ctgtaagact
      541 caggaagaca cctacgaccc cggcgccgcg ctgaaagatg ctctcgagtg gagaaagtgt
      601 tggaacgacg ggggcgacag gtggggcaag caggcgggtc gaggccaggg ttcgcacctc
      661 tccatcgatc tctccaccgt cgtctcgtac ttgtcctccg agcgtgagca catcgcccgt
      721 caccactgct cccggatgga ccacggcgtc tccccgtacc gtcaccagat tgccgaccag
      781 ccggccgtag acatcggcgg tgccgtcaac taccaacagg tctccagtga gtgtctccga
      841 ggctcgcagg ttgaagtctc cctgccgggc agtcccacct gctacggtga cccgcagata
      901 tccgcgacct ggaccaagca ccgattccag ccggttctcg attgtcgtcg gatggctgag
      961 atcccgcagg tccacgacag ggccaccctg cgcagcgctg tgaagcaggc cgcgaacgtg
     1021 gctgacgaga tcgaccgcgg tggaggtgag acgatcgagc gtactgtcgg cgtaaagtgg
     1081 ggccgacccg agcactgaga tggccgccag cgcgagaacg cttctatacg ccggcatggg
     1141 ccacctgctg agttggagca gtcaggaggc gacgcaatgc cagcagcccg ccgagataga
     1201 ccagcgacag cagcccggag tagagcgcga ggcgtcccgg attgtccaag agtcctctga
     1261 cggtgctgta ccagggctgc tcgataaagg tggaggccac tccctgaaca ctcagccaga
     1321 gggcctgccc accctgggcc aggaaccagg acccgatggc ggccagcgtc gcctggtggg
     1381 tcagcgacca caccacactt ccgagcatcg agccggccag caagagaatc agactggccg
     1441 cgcgggcaaa cgatctggga gtggcaaaga gccggcgccg agttgcctgg agcgagcgga
     1501 tggcgaacgg atcgggaaca ctgaccgagg ccatgacccg atcggcgaac ccctcggagg
     1561 gagccaccag cggcaatccc gctatgagct cggcgatttc acgctcggag cgtacctgct
     1621 ctacacacgc ctgacagcga tcgaggtgct gctgcacctc tggagcggga gctccgctga
     1681 ggcaactgtc gatctcgtcg ggcgagagat gatctccggg aggacgggtc ataagtggac
     1741 cctcctacgt tcagggtgaa ggg
//
LOCUS       DASRPQ010000500         3185 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3200891, whole genome shotgun sequence.
ACCESSION   DASRPQ010000500 DASRPQ010000000
VERSION     DASRPQ010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3185
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3200891"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..230
                     /locus_tag="VFD73_05930"
     tRNA            158..230
                     /locus_tag="VFD73_05930"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:191..193,aa:Asn,seq:gtt)
     gene            complement(286..1299)
                     /locus_tag="VFD73_05935"
     CDS             complement(286..1299)
                     /locus_tag="VFD73_05935"
                     /inference="COORDINATES: protein motif:HMM:NF013507.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HZI73556.1"
                     /translation="MRYDFPFYPLATASILTLAACSETTTPTQPDMAGNPPSPTLAVA
                     TASNTWSRKASILADQYLGGYSVGMAPDATGESIVYVIGGSSADDGSTGYRIEAYNSV
                     TNTWTNKSSSADAFGLNGVGKIANRLYFSGGADYGSGSLAYHNTLWAYDYSNDRMIRR
                     ANMPVYSGEGVSGVINGKLYVLPGTCSGDNYPNPGFCAEEPIRKLYRYDPSTNSWATK
                     ASAPHFHKHGAAGVINNKLYVVAGFHDFDPVANLDVYDPATNTWKTLASIPGGGGGAN
                     GAVIHGQLFVVGSGGAYAYNPATNKWAAKAAPLAGGPLTKVYLNGNSYLLLPGRPSQL
                     YTP"
     gene            complement(1359..2792)
                     /locus_tag="VFD73_05940"
     CDS             complement(1359..2792)
                     /locus_tag="VFD73_05940"
                     /inference="COORDINATES: protein motif:HMM:NF014428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HZI73557.1"
                     /translation="MLPFSLLAVLACGGEDLTLPTGSSPSSPAPSQLHMAAGDKQTGT
                     AGSALPEPVMVQVLDDSGNGLPGQQVSWVIGTGGGSATPQGSTTDQQGFASATWTLGS
                     PGSNTLAAVVSGVGSVTFSAMANAGDDNGGGDNGGGNNGGGNNGGGSGAGSGTVPSAS
                     ASTVSADPSSIQVGSGVSNIRVTVRDQSGAPVSGAVVTLTASGTGNTLVQPGQPTGAD
                     GVAVGSLRSSVAGTKDVTATVNGTMQIGETAQIFVALAPATRVVMLEGNNQRAGTGQT
                     LAVSPAVRVTDAAGDPVAGFGVTFVVTAGGGTATAASQTTDANGVARVGSWTLGSSAG
                     QNTLEARAGSLTGSPVVFNATATAPQPPPPTAAPDHFVFTVQPHDVNEKQFFTVQVAI
                     MDASGNVVPLNGTEIYIGLLAVGEDHPLNGHLMGDRFEDTQGGMSTFNLAVDRKGTYH
                     LLARSDYLPKNLGPYGPELFSNTFQVR"
BASE COUNT          594 a          969 c         1018 g          604 t
ORIGIN      
        1 gctcccggct caagtgaacg cttgctcgcc actacgatac tgagagcgcc cactcgccac
       61 gactccagac ccctccgagc tggcgtaccg ttgcctagct tcggtgcgct cactagttta
      121 ccgcgcggcg aagggccgca aggccctggt cataccttcc cgagtagctc agttggtaga
      181 gcaggtgact gttaatcacc gggtcggggg ttcgagtccc tcctcgggag tagagtagag
      241 ttgaaggaac atccgcacag gggctccgcg aggagcccct ttcgactatg gcgtatagag
      301 ctggctgggc cgacccggca gcaacaggta cgagttgccg ttgaggtaga cctttgtcag
      361 cgggccacct gcgagaggcg cggccttggc agcccacttg ttggtggctg ggttgtaggc
      421 gtaggcgcct cccgatccga caacgaacag ctgaccgtgg atgactgcac cattggcacc
      481 gccgcctccg cccgggatgc tggcaagggt tttccaggta ttggttgccg gatcgtatac
      541 gtccaggttc gcgaccggat cgaaatcgtg aaacccggcc acgacgtaca acttgttgtt
      601 gatgaccccc gcagctccgt gcttgtgaaa atgtggtgcc gacgccttcg tagcccagct
      661 atttgtactc ggatcgtacc gatacaactt gcgaatcggt tcctcggcgc agaagcccgg
      721 gttgggatag ttgtcgccgg agcaggtgcc agggagcacg tagagcttcc cgttgatgac
      781 tccgctgacc ccctccccac tgtacacggg catgttggcc cttcggatca tccggtcatt
      841 gctgtaatcg taggcccaga gcgtgttgtg gtatgcgaga gacccggagc cgtagtcggc
      901 cccaccggag aaatacagcc ggttggcgat cttcccgacg ccattcaggc cgaacgcatc
      961 ggcgcttgac gacttattgg tccaggtatt ggtgacggaa ttgtaggcct cgatacgata
     1021 gccggtggaa ccgtcgtcag ccgagctccc accgatgaca tacacgatcg attctcccgt
     1081 agcatcggga gccatgccga ccgagtaccc acccaagtac tgatccgcga ggatggaagc
     1141 cttccggctc caggtgttcg aggcagttgc gacagccagg gtgggtgacg gagggttccc
     1201 agccatatcg ggctgggtgg gagtagtggt ctcgctgcac gcggcaaggg tcagtatgct
     1261 agccgtggcc agcggataga acgggaagtc gtagcgcatt tgggcctcct cgtggaggca
     1321 agaacgatac gcccgccggt caagcagata tcaaggcgtt agcggacctg gaacgtattg
     1381 ctgaagagct ccggcccgta gggacccaga ttcttcggta gataatcgga ccgcgccagc
     1441 agatggtacg ttcccttcct gtccaccgcc aggttgaacg tggacatgcc accctgagta
     1501 tcctcgaagc gatcacccat gaggtgtccg ttgagggggt ggtcctcgcc taccgccagt
     1561 agcccgatgt agatctcggt accattcaac ggaacgacat tgcccgatgc atccatgatg
     1621 gcgacctgaa cggtgaagaa ttgcttctcg ttcacgtcgt gtggctggac ggtgaacacg
     1681 aaatggtccg gcgcggctgt cgggggtggc ggctgcggcg ctgtggcagt cgcgttgaac
     1741 accaccgggc ttccagtgag cgagcccgca cgcgcctcca gggtgttctg tcctgctgag
     1801 gatcccaggg tccacgaccc tacccgggcc acgccattgg cgtcggtggt ctgagaggca
     1861 gcggtggcgg ttcctcctcc tgcggtgacg acgaaggtca ctccgaaccc cgcgacgggg
     1921 tcgccggcag catcggttac ccgaacggca ggagagacag cgagcgtctg gccggttccg
     1981 gcacgctgat tgtttccttc cagcatcacc acgcgagtgg ccggagcgag ggccacgaag
     2041 atttgagcgg tttctccgat ctgcatcgta ccgttgaccg tcgcggtgac atccttggta
     2101 ccggccacac tggaccggag ggatccgacc gccacgccat cggctccagt gggctgccca
     2161 ggctgaacca gggtattccc tgtaccactc gcggtcagcg taaccacagc accggagact
     2221 ggagctcccg actggtcgcg tacagtcacc ctgatattgg agactccgct ccccacctgg
     2281 atcgaagaag gatcggcgga gacggtggac gcggaggcgc tgggaactgt gccgctaccg
     2341 gcgccgcttc ccccaccgtt gttaccaccg ccattgtttc ctccgccgtt atcgcctccc
     2401 ccgttatcgt cgccggcgtt ggccatcgca ctgaacgtga cgcttcccac gcccgacacg
     2461 accgcggcca gcgtgttgga tcccggggag ccgagggtcc aggttgcgga ggcgaagccc
     2521 tgctggtctg tcgtcgatcc ttggggagta gcacttccac ccccggtccc gatcacccag
     2581 ctgacctgtt ggcccgggag gccatttccg gagtcatcca gcacctggac catcaccggc
     2641 tcgggtaagg cagagcccgc ggtcccggtc tgcttatcac cagcggccat gtgcagctgg
     2701 ctgggagctg ggctggaagg gctgcttcca gtaggcaagg tcaggtcttc tccaccgcaa
     2761 gccagcacgg ccaggaggga gaagggcagc atcagcctac tgctcaagtt cagtcgcatc
     2821 atatacttat ctatgactgc acggggctcg ttctgggctc gaacccacgc tggtggacta
     2881 cctagtttag aaatgtgggg gagcatcgct gtgattccac ccacacgacc atcatcctgc
     2941 gacctcggaa aacagagggc ggcaagcaag ggttcccgcg ctccagggaa gaagggatgc
     3001 tgagctgaag cgcggactag aggagaaggg gcggggtcgg actagcaggg tcttcggagg
     3061 tggagactac gtgcgctcta ggccgactgt cccgagcctc tccgccggcg cggacgaccg
     3121 ccacgaaagt cgaagtggtt ctcgttcagc atggcggaga tggaggaagc gcgaccatcg
     3181 caggg
//
LOCUS       DASRPQ010000501         1858 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_374102, whole genome shotgun sequence.
ACCESSION   DASRPQ010000501 DASRPQ010000000
VERSION     DASRPQ010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_374102"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1606
                     /locus_tag="VFD73_05945"
     CDS             <1..1606
                     /locus_tag="VFD73_05945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HZI73558.1"
                     /translation="VMSQIVEGRNGALTPDEAPSLDPATGRFSGKFPPADNITLGFAG
                     QFAQMIFSGHGTFSATLIGLGLGDARNGIPISYTYRTTSGSGALDTVTIQLAQPTDNS
                     TSEALSDPFDAATSDPSLAARFGVPSGFVQKGRIAQSSVSYQRHTGFGRGCHSGDSLF
                     GGHCSYNGPRWFVGANETRSDPNHGNVAGTGNATDNNNAGELPGVLTIQNPQSYTQIS
                     PEYRSTESILAGAVRAADFNVYWGAGGLVDSVIDLTHNVPVPYLSDSLGGGWGFLNQT
                     STAAPGSADRRPDVLTLMDYGCVFPLNDVRRNPDQEFACSAGTRYTLSQTAVPGAIAI
                     YGGPDTAGTIVPIRPNPGFSLYLAGHIFLFELASGAGVPSTGTVWTLRSYIGSVNGGN
                     GAAGSEGPYAFTSAPRTFSALGATVRLTFDASNSIASPTIDDLSHVHTVPDPYYVTNQ
                     YEMATQSKVLKFVNLPADAIIRIYSASGVLVTLLEHHSASFGGAETWNVRSRNNQVVA
                     SGVYFYHIESGGARKVGRFTLVNFAE"
BASE COUNT          356 a          589 c          563 g          350 t
ORIGIN      
        1 ggtaatgtct cagatcgtgg aggggcgaaa cggcgccctg actcccgacg aggctccctc
       61 actagatccc gctaccggtc gtttcagcgg caagtttcca cccgccgaca acatcaccct
      121 cggcttcgct gggcagtttg cccagatgat ctttagcggc catgggacgt tctctgcgac
      181 actcatcgga ctgggcctgg gcgatgcccg gaacggcatt ccgatttctt acacctatcg
      241 gaccacctca gggtccggtg cgctggacac agtgacaatc cagctcgccc agccgaccga
      301 caactcgacc tcggaggcgc tgagcgatcc cttcgacgcc gcaaccagtg acccgtcgct
      361 ggcggctcgg ttcggcgtcc ccagtgggtt cgtgcagaag ggccggatcg cccaaagtag
      421 cgtgtcctat cagcgacaca ccggattcgg tcgcggctgc cacagtgggg acagcctgtt
      481 cgggggccat tgcagctaca atggcccgcg gtggttcgtc ggggccaacg agaccaggag
      541 cgatcctaat cacggcaatg tggccgggac cgggaacgcc accgacaaca acaacgccgg
      601 ggagctgccg ggagtgctga ccattcagaa cccgcagtcc tacacccaga tcagtccgga
      661 gtatcgcagc actgaatcga ttctcgctgg ggcagtgcgc gcagcggatt tcaacgtgta
      721 ctggggtgcg ggcggtctgg tggattcggt catcgacctg acacacaacg tgccggttcc
      781 atacctcagc gacagtctcg gcggcggctg gggattcctc aaccaaacca gtactgccgc
      841 gcccggctcg gcggaccgcc ggcccgacgt gttgaccctc atggattacg gttgcgtgtt
      901 ccccttgaac gatgtcaggc gcaatccgga ccaggagttc gcttgctcag caggtacccg
      961 gtacactctc agccagacgg cggtgcccgg agcgattgcg atctatgggg gaccggatac
     1021 cgcaggaact attgtgccca ttcgtcccaa tcccggcttc tccctgtatc tggcggggca
     1081 catttttctt ttcgagctgg catccggcgc cggggtacct tcaacaggca ccgtgtggac
     1141 cctgcgcagt tacatcggaa gcgtgaacgg cggcaacggt gccgccggca gtgaaggacc
     1201 ttacgccttc accagcgctc cccgaacgtt ctcggcgctg ggtgcgacag tacgactgac
     1261 attcgatgcc agcaattcga tcgcatctcc caccatagac gatctgtccc atgtccatac
     1321 ggtgcccgat ccgtactacg tcaccaacca gtacgagatg gcgacgcaga gcaaggtcct
     1381 caagttcgtc aacctgccgg cggacgccat catccgcatc tattccgcta gcggagttct
     1441 ggtgaccctg ctggaacatc actctgctag cttcggagga gccgagacct ggaacgtgcg
     1501 gagccgaaat aaccaggtag tggcgagcgg ggtgtacttc taccacatcg agtcgggcgg
     1561 agcacggaag gtcggacggt tcaccttggt gaatttcgca gagtaggggc ggtcagggcg
     1621 gtcattccgc gcgcagcgag gaaccggttc gcttgagttc gccggcgagt aaccgtttgg
     1681 accgaacggc gtaggtatac tatatggcgc actatctaat gaaacgccgc cgggaatccg
     1741 gattcacacc cacggctgcc caccttatct gcgttccccc accagtcgtg ccagctcagc
     1801 ccgcactcgg tcaacctccg gtttgacgga gggctcaggg ttgtagcgca gtgcgagg
//
LOCUS       DASRPQ010000502         3521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2878939, whole genome shotgun sequence.
ACCESSION   DASRPQ010000502 DASRPQ010000000
VERSION     DASRPQ010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3521
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2878939"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(324..983)
                     /locus_tag="VFD73_05950"
     CDS             complement(324..983)
                     /locus_tag="VFD73_05950"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI73559.1"
                     /translation="MRTFSEDAGRAWRAGGWPSVMDELRRRIMDRIGGYVRRFVIEAD
                     LSRMVEVAAPPEVDIRPFTGPDWALLGDLGRSRLADQFREAADAGRVCLVAWKRRQAI
                     GYVWFSEKIESQHERYELPLPAEAVHVGQIDVVRDERGSGVASALLSTGLRYFRDRGF
                     QRSWIIVHPNDVAAMCSIAGVAPSTVLGTVGRVKVLDWMRNRYLELSPPVPVVPSQSS
                     S"
     gene            complement(1061..2305)
                     /locus_tag="VFD73_05955"
     CDS             complement(1061..2305)
                     /locus_tag="VFD73_05955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73560.1"
                     /translation="MSQPGAVVIGGYATAVSALRSLAREGVRTAVVLTDRNDIAHRSR
                     YAHEFHRVRALDKSVDGLIDLLQEQGLRWRGWALIPTTDDALGALAAHRNLLSRCYPM
                     TVPSAKAVQQVLERAATYRAASELGIAVPYHYGPATRRTAGRSDIVYPVVVKPTESSR
                     FWKMFGTKLFVARSPLELVAAIDRLEQSGLTAELFDLVPGSDDQCYTYSVYLDRWGKP
                     AAEFCFRILRKAPRFFGDARAAEPALAPELRDGTIALLQRIGWQGVASVEYKRDPRDG
                     RYRLLGITGRAHLSHGLATRCGVNFPLLSWLEHARHQPVSASANGWSGRWLHLHTDLL
                     YCALQERHDDVSWRELLRSYTNPWVDAVWSAADPAPFVAQCIGTLKKAAREIREGREM
                     ETLNSRVQPPPPEMFRTSSGPK"
     gene            complement(2604..>3521)
                     /locus_tag="VFD73_05960"
     CDS             complement(2604..>3521)
                     /locus_tag="VFD73_05960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73561.1"
                     /translation="RDESGFIQRPGIVHANLDHSVTLYGKAGGLLESFTGDVALDGTW
                     EYQKFVHSEGIQDRKLHFNTNTRFQGGWQFGASVLMETFGYPADVYANYALEVPTAGG
                     LDTVPFTGRPTIPNLDYVLTLDTPQFSHFSGNLFFLWGHDENFYEWASARITWLQLTL
                     DWRPTDKLRVNSYYQIQYVGRRSDGSTVDLWKSPRLKLEYQLSRPIFLRLVGEYTTER
                     RDALRDETRTNAPILIFDPDLNDYLRTTAFGHRSFRGDLLFAYQPNPGTVLFAGYGST
                     LTDPSELGRSRLQPSQDGFFLKLSYLFQL"
BASE COUNT          642 a         1129 c         1161 g          589 t
ORIGIN      
        1 gcttccgcag ctgagcctga ccgactcgaa cagtgttgcg ccggtctcct cccctcgtgc
       61 tgacgcgccc gtcggagtcc cgccagtcgg taggcacgcc cgtccatctg gcaaggttcg
      121 gagtcccgcg agtcggttgt cggggtgtca ctagatggtg gccaccgcgc tgggtgcagc
      181 tccggagggc acgtcagaac gaggtgagga gaccgggctt ctattcgacg cagacccgtg
      241 aggtggcata gatacgcccg ggctccgagc gtcgagttct gcagtgcccg gaggagctgc
      301 cccagcgcgg taaccaacga aactcaggag gacgactggc tcgggaccac cggcaccggc
      361 ggactcagct ccagataccg gttccgcatc cagtccagaa ccttcacccg gccgactgtt
      421 cccagcaccg tgcttggcgc cacaccggcg atgctgcaca tggcggcaac gtcgttggga
      481 tggacgatga tccagctgcg ttggaatccg cgatcgcgga agtaccggag cccggtgctc
      541 aggagcgccg aagccactcc gctgccccgc tcgtcccgga ccacgtcgat ctggccgacg
      601 tgcaccgctt ccgccggaag gggcagctcg tatcgctcgt gctggctctc gatcttttcc
      661 gagaaccaca cgtagccgat tgcctggcgc cgtttccagg ccaccagaca gactcggccc
      721 gcatcggccg cctcgcggaa ctggtcggcc agacggctcc gtcccaggtc gccgagcaac
      781 gcccaatcgg gtccggtaaa ggggcgaatg tcgacctcgg gcggggcggc gacctcgacc
      841 atgcgggaca ggtcggcctc gatcacgaac cgccgcacgt agccgccaat ccggtccatg
      901 atccgacgcc gcagctcgtc catgaccgag ggccacccgc ccgcccgcca ggcgcgcccg
      961 gcgtcctccg agaaagtgcg catatcggac ataaagtgcg gccggatcag tcgctgcgga
     1021 aggtctggag cggagagccg aacccctgca aagccacggc ctacttcggt ccggaggagg
     1081 tgcggaacat ttcaggcggc ggcggctgga cccgggagtt gagcgtctcc atctctcggc
     1141 cctcccggat ctcgcgggct gccttcttca gcgtgccgat gcattgggcg acgaacggcg
     1201 ccggatcggc ggctgaccac acggcatcca cccacggatt ggtgtaactc cgcagtaact
     1261 cgcgccagct cacgtcgtca tgccgctcct gcagggcgca gtagaggaga tcggtgtgga
     1321 gatggagcca gcgtccactc cagccgtttg ccgaagcgga aaccggctga tggcgggcat
     1381 gctccagcca ggagaggagg ggaaagttca ccccgcagcg agtggccagc ccgtggctca
     1441 ggtgggcgcg gccggtgatt ccgagcaggc gatagcgccc gtcgcgcggg tcgcgcttgt
     1501 actccacgct ggcaacgccc tgccaaccga tccgctggag cagggcgatg gttccgtcgc
     1561 gcagctccgg tgcgagcgcc ggctcggcgg cgcgggcatc gccgaagaac cgcggcgcct
     1621 tgcgaaggat ccggaagcag aactcggcgg caggtttgcc ccagcgatcg aggtagacgc
     1681 tgtacgtgta gcactggtca tcggagccgg gcaccaggtc gaacagctcc gctgtgagcc
     1741 cgctctgctc cagccggtcg atggcagcaa ccagctccag cgggctccgc gccacgaaga
     1801 gcttcgtgcc gaacatcttc cagaatcgcg agctttccgt cggcttgacc acaaccggat
     1861 agacgatgtc gctccgcccg gccgttcgcc tggtggctgg cccgtagtgg tagggaacgg
     1921 caatgcccag ctcactcgca gcccggtacg tcgccgcgcg ctcgagcacc tgctggacgg
     1981 ccttggcgga cggcaccgtc atcggataac agcgcgagag gagattccgg tgcgccgcca
     2041 gtgcgccgag cgcatcgtcg gtggttggaa tgagcgccca gccccgccag cggagaccct
     2101 gctcctggag cagatcgatc agcccgtcga cactcttgtc cagcgcgcga acccggtgaa
     2161 actcgtgagc gtagcgggag cgatgcgcga tgtcgtttcg gtcggtgaga acgactgcgg
     2221 ttcgcacacc ttcgcgggcc aggctgcgca gggcgctcac ggcggtggca tagccaccaa
     2281 tgaccacggc acccggctgg ctcaccatgc gactcgacga cgttgggatt gcatcagagc
     2341 tgctcgggag aagtggtttg ggctagttac caggtttgcg ctgccaccaa atgcgcgaca
     2401 agagaggggc aagaggcacg ccaatgtggg cttccgccga ctctcgcccc atcagcacaa
     2461 actcctccgc gtcaactgct tgaggcggtg cgccttctcc tgacgaagac gaccaaccga
     2521 cgtaagcaga gcgaggtttt gataggcgcg agacgttgta gcggtggagc tacaaacagc
     2581 aacgaatgca attgttggaa ggcctagagc tggaacaggt agctgagctt caggaagaat
     2641 ccatcctggc tgggctgcag ccggctgcgt cccagctcgc ttggatcggt gagcgtgctg
     2701 ccgtagccgg caaagagaac ggtgcccggg ttgggctgat aagcgaacag caggtcaccc
     2761 cggaacgagc gatggccgaa cgccgtggtg cggaggtagt cgttcagatc gggatcgaaa
     2821 atcagaatcg gtgcgttggt tcgggtctcg tcccgcagcg catctctccg ttcggtggtg
     2881 tactcgccca ccagcctgag gaagatgggc cgggagagtt gatactccag cttgagccga
     2941 gggctcttcc acagatccac cgtgctgcca tcactccggc gacccacgta ctgaatctgg
     3001 tagtagctgt tcacccggag cttatcggtt ggtctccagt ccagcgtcag ttgtagccag
     3061 gtgatccggg cactggccca ctcgtagaaa ttctcgtcgt ggccccagag gaaaaagaga
     3121 ttacctgaga agtgggagaa ctgcggtgtg tcgagagtga gcacgtaatc gagattggga
     3181 atcgtcggcc ggccggtgaa cggcacggtg tcgagtccgc cggcggtcgg gacttccagc
     3241 gcatagttgg catacacatc cgccggataa ccgaacgtct ccatcagcac cgaggcgccg
     3301 aactgccagc ccccctggaa acgggtgttg gtgttgaagt ggagcttccg gtcctgaatc
     3361 ccctcgctgt gcacgaactt ctgatactcc caggtgccgt cgagcgccac gtcaccggtg
     3421 aagctctcca gcaacccgcc cgctttgccg tacagggtga cactgtgatc gaggttggcg
     3481 tgcacgatgc cagggcgctg gatgaacccg ctttcgtccc g
//
LOCUS       DASRPQ010000503         1380 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_685698, whole genome shotgun sequence.
ACCESSION   DASRPQ010000503 DASRPQ010000000
VERSION     DASRPQ010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1380
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_685698"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(47..292)
                     /locus_tag="VFD73_05965"
     CDS             complement(47..292)
                     /locus_tag="VFD73_05965"
                     /inference="COORDINATES: protein motif:HMM:NF024934.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI73562.1"
                     /translation="MARLQKVDRDDRVFAAIPLTGEDIGDYLGLRFETVSRNQRKLRE
                     CGAVRPLSGLDGVEIRDMALLLSLAEGGSPRGSSAWA"
     gene            371..>1380
                     /locus_tag="VFD73_05970"
     CDS             371..>1380
                     /locus_tag="VFD73_05970"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI73563.1"
                     /translation="MIRGGFLTAEERRDLTELARDGLAEHRLARRANALVLLDRGMSC
                     DEVGRVLLIDDDTIRTWHDLFEKDGVDGLAGFTYGGRASPLSLDQQATLKVWVGETLP
                     RTTREVGAWIEQTFGVVYQSRSGLIALLHRLGMEHRKPQAVSRKLDPARQQAFIDAYE
                     TLLRTLPDDEAVLFADAVHPTHGTRPVGCWAPKEIKVAVDQTSGRDRLNIHGALDLET
                     GKTRMIEVVTVNALSTIALLVAIEALYPARRIIHVFLDNARYHHARAVQDWLAMPGRR
                     IRLHFVPAYCPHLNPIERLWGLMHKTVTHNRCYATYNGFCEAVLGFLQNDVPSRWHML
                     CD"
BASE COUNT          253 a          430 c          454 g          243 t
ORIGIN      
        1 gctcctggcc gccgacccgg tggttaccag gaacgtggcc ggcagatcac gcccaggccg
       61 aggatcctcg gggactgcca ccctcggcga ggctcaggag cagggccatg tcccggatct
      121 cgaccccgtc caatcccgac agtggacgga ctgccccgca ttcgcgcagc ttgcgctggt
      181 ttcgggaaac cgtttcaaag cgcagcccga ggtagtcacc gatgtcctcg ccggtgagcg
      241 gtatggcggc gaagaccctg tcatcccggt caaccttctg caatctggcc atctgcacat
      301 ataccgcgac tccgtgagat gtcgaaaaaa ccgcttgcca gacaggggcg gaaggattca
      361 tctcggcacc atgattcgcg gcggctttct gacagcggag gaacggcggg acctgaccga
      421 gttggctcgg gacgggctgg ctgagcatcg tctggcccgg cgggcgaacg ccctggtgct
      481 gctggatcgc gggatgagtt gtgacgaggt cggccgagtg ctgctgatcg acgacgacac
      541 gatccggacg tggcacgacc tgtttgagaa ggatggcgtc gatgggttgg ctggcttcac
      601 ctacggcggc cgggccagtc cgttgagcct ggaccagcag gcgacgctga aggtgtgggt
      661 tggcgaaacc ttgccgcgga cgacccgtga ggttggagcg tggatcgagc agacgttcgg
      721 ggtcgtctac cagagccgtt ccgggctgat tgcgctgctg catcgccttg gcatggagca
      781 ccgcaagccc caggcggtgt cgcgcaagct cgacccagcc agacagcagg ccttcatcga
      841 cgcctacgag acgctgctga ggacgctgcc cgacgacgaa gcagtgttgt tcgccgacgc
      901 ggtgcatccc acccatggga cacggccagt gggctgttgg gcgcccaaag agatcaaggt
      961 cgcggtggac cagaccagtg gccgggatcg cctgaacatt cacggcgccc tcgatctgga
     1021 aaccggcaag acccgcatga tcgaggtggt gacggtcaac gccctgagca cgatcgctct
     1081 cctggtcgcg atcgaggccc tgtatccggc gaggcggatc attcatgtgt tcctggacaa
     1141 cgcccgctac catcacgccc gggcggttca ggattggctg gccatgccgg gccggcggat
     1201 caggctccac ttcgttccgg cctactgccc gcatctgaac ccaatcgagc gtctctgggg
     1261 actgatgcac aaaaccgtga cccacaaccg atgttacgcc acttacaacg gcttctgcga
     1321 agccgtgctt ggcttcttgc agaacgacgt tcccagcagg tggcacatgt tatgcgatag
//
LOCUS       DASRPQ010000504         1046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_58515, whole genome shotgun sequence.
ACCESSION   DASRPQ010000504 DASRPQ010000000
VERSION     DASRPQ010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58515"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..776)
                     /locus_tag="VFD73_05975"
     CDS             complement(<1..776)
                     /locus_tag="VFD73_05975"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HZI73564.1"
                     /translation="MAGKNERQRRIARERHRRQQEQRLVRQRQVRQRWLIGLSGVLVL
                     ALVGSLLAVFLPSGKPKKPAAAASKSPSASASATPTATAVAEPAHHCSYTSAAPAAKK
                     VSLPPAAPDYTDSYQATINTNQGKITFNLLNSKATCTVNSFVHLAQAGYFNNTQCHRV
                     VTSGIYVLQCGDAYATASAKLNCSSTSKVGSGSPGYAFANENLTGAKYPAGTVAMANG
                     GPNTNGSQFFIVYKDSTSGLNGSSGPAYTPFATVSSGLGIV"
BASE COUNT          159 a          333 c          348 g          206 t
ORIGIN      
        1 acgataccga gcccggagga cactgtggca aacggtgtat atgccggacc ggaagagccg
       61 ttgagtcccg acgtgctgtc cttgtacacg atgaagaact ggctgccgtt tgtgttcggg
      121 cctccgttag ccatcgccac cgttcccgcc gggtatttgg cgcccgtgag gttctcattg
      181 gcgaaagcgt aacccggcga gccggaaccg accttgctgg tcgagctgca gttcagcttg
      241 gcggaagcgg tcgcgtacgc atcgccgcac tgcagcacgt agatgccgct ggtcaccaca
      301 cggtggcact gggtgttgtt gaaatagccc gcctgcgcca ggtggacgaa cgagttgacg
      361 gtgcaggtgg ccttgctatt cagcaggttg aacgtgatct tgccctggtt ggtgttgatc
      421 gtggcctgat agctgtccgt gtaatcaggc gcggctggcg ggaggctcac cttcttcgcc
      481 gccggggcgg ccgacgtgta gctgcagtga tgtgcaggct cggccacggc cgtggcggtg
      541 ggggtcgcgc tggcagaggc gctcggcgac ttgctcgccg cggcggccgg cttcttgggc
      601 ttcccgctgg ggaggaacac cgcgagcagg gagccgacta gggccagaac gagaaccccg
      661 ctgagcccga tcagccagcg ctggcgcacc tgccgctgcc tgaccagccg ctgttcctgc
      721 tgccggcgat gccgctccct ggctatcctg cgctggcgtt cgtttttacc cgccaccggt
      781 cgcgtcctcc ttggcctgtc gcaactatcg gctaccactg gtattcacgg gggcaggccg
      841 acgaacccga tgcatacctc tgatcgcgac acgcgggcat gctccgggct cgccccccgg
      901 aatccccgca atgttcgcga tcgttcgcga atcgtacctg ccagatgcct gggcaggcac
      961 ccttcgttac cggttcgcgg ccatgcgggt cccctcggta gcctgagaca ccgtaccgtg
     1021 agaaaggacg cttgtgcttg tcgcag
//
LOCUS       DASRPQ010000505         1090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_998562, whole genome shotgun sequence.
ACCESSION   DASRPQ010000505 DASRPQ010000000
VERSION     DASRPQ010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_998562"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..187)
                     /locus_tag="VFD73_05980"
     CDS             complement(<1..187)
                     /locus_tag="VFD73_05980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73565.1"
                     /translation="MRFAALLLLLQANYALAQEPSPTTLVVQQSGRETGREEFTLRQG
                     RGRGAPGTTLIATAHYPV"
     gene            complement(204..884)
                     /locus_tag="VFD73_05985"
     CDS             complement(204..884)
                     /locus_tag="VFD73_05985"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HZI73566.1"
                     /translation="MTPGAVGERLLQRASLIVPVGTTEQHGPHLPLGCDTIIVERLAD
                     DLSEKFEIVRTPTVEYGVHAALRTFPGGAALRRRTLHRVMNELIESWEAGAGVREFFI
                     LTAQSSEAHLEALSAIRTDEAKVQVIDIFSLDFGNLLERPSPIQGGELDTSLLLFLAP
                     QLVRMELAQDFAPAPSLLSRYRPGQSRHLPAGSPGSVGYPSLASAQKGESLYRFILDR
                     VSSCLVKS"
BASE COUNT          167 a          352 c          362 g          209 t
ORIGIN      
        1 ccaccgggta gtgagctgtg gcgatcagtg tcgtccccgg tgccccgcgc ccgcggccct
       61 gccgcagcgt gaactcttct ctcccggttt cccggccact ctgctgcacc accagcgtag
      121 tgggagatgg ttcctgggcg agcgcgtaat tcgcctgtaa caggagcaag agcgcggcga
      181 agcgcatggt gactccgatg atcttaggat ttgaccagac agctgctgac ccggtcgaga
      241 ataaatctat acaggctttc gcccttctgg gcgctggcca ggctggggta tcccaccgat
      301 cccggagatc cggccggaag gtggcggctc tgacccggac ggtagcggga gagcaggctg
      361 ggtgcgggag cgaagtcctg ggccagctcc atccggacca gctgcggcgc gaggaagaga
      421 agcagcgagg tgtccagttc gcctccctgg atcggcgaag ggcgctccag caggtttccg
      481 aagtcgaggc tgaagatatc gatcacctgc acctttgcct cgtcggtacg gatggcgctg
      541 agggcttcca gatgtgcctc gctcgactgc gccgtgagga tgaagaattc tcggacgcct
      601 gcccccgctt cccaggactc gataagttcg ttcatcaccc ggtgcagcgt tcggcgacgc
      661 agggcggctc cgcccggaaa ggtgcggagc gcggcgtgca ctccgtattc gacggtcggg
      721 gtgcgaacaa tctcgaattt ctccgacagg tcgtccgcca gacgctccac gatgatcgtg
      781 tcgcaaccga gcggtaaatg aggcccgtgc tgttcggtcg tgcccaccgg gacgatcagg
      841 ctggcgcgct gcagcagccg ctcgcccacc gcaccggggg tcatctcctt caatcgccag
      901 gggtgccgct cttgcgtcat cgtgggcgtc tgtggctcgc tgtgatattg atcgccgggg
      961 gcattgccgc cgaatggctg cggcagccct ccgccggctg gatcgtagct tcctggcttg
     1021 tcgtccccgc cgccatggcc gccctctggc cgatttccgg ctggcgctgc tggaccctgc
     1081 tgctgctcct
//
LOCUS       DASRPQ010000506         2621 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2252350, whole genome shotgun sequence.
ACCESSION   DASRPQ010000506 DASRPQ010000000
VERSION     DASRPQ010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2621
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2252350"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..512)
                     /locus_tag="VFD73_05990"
     CDS             complement(<1..512)
                     /locus_tag="VFD73_05990"
                     /inference="COORDINATES: protein motif:HMM:NF018899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HZI73567.1"
                     /translation="MRLARWWLCVLALGLPALLNAQQTGRVVRKLSFEGNRALTDETL
                     ATAIATTNSSWFASGFLRWLGLGAKRYFDEQEFRRDVVRLSVLYRRSGYPDAVIDTLV
                     RRTPQDVYITFNIQEGAPILVTSLTISGLDSLRDRLHRTVLVDLPLRQGDPFNRFAMQ
                     ATADTITRRLR"
     gene            726..2258
                     /locus_tag="VFD73_05995"
     CDS             726..2258
                     /locus_tag="VFD73_05995"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZI73568.1"
                     /translation="MHRLLLASALTLTACADQGGGAALNYYFTYDPRSLDPALSTDVP
                     TGEVVSLLFDNLTQFDADAQLKPSLATRWETDPSGRIYTFHLRQNATFHDGRPVKAGQ
                     VRASLLRALAPGTTGGRAWPLYPIRGARAYADGASKDVDGISATNDSTLVLTLEEPLN
                     LFPKLLAMPVAAIVPTPAPTDLDQHPIGSGPWKFVSWSHDDAIVLAKNEKYWGGAPKS
                     DTLRIRIIPEPLTQAAEFEAGQLSVVEVPVGETRRWEESHKPELQRRPALRDLYVAIN
                     TTRGPLKDVRVRRALNYAVDVPTMLTTVLAGRGVRAAGSLPPGVLGYDSTRTPYRYDP
                     AEAKRLLAEAGYPNGFAVKLWRTQRSELARLAQSLQQALGEVGVRTEIVERDASSARA
                     AVRHGDADLFLTDWWCDYPDPENFNYPLFHSRNKGPGGNYAFLADSALDTMILRARAT
                     QDSAEKLRLSRSIDQRVFDLAPWIFLWFPVDLWATQPDVHGWKIPLVVTGQRWMQAER
                     RR"
     gene            2255..>2621
                     /locus_tag="VFD73_06000"
     CDS             2255..>2621
                     /locus_tag="VFD73_06000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI73569.1"
                     /translation="MSRFLLQRVLLLIPTLFGVLLVTFLLLYVAPGDPVQAMVGERAD
                     PETLARLRAELHLDDPLYRQFGHYVGGVVRGNLGTSYITRRPIIRDLLERFPATLRLA
                     GAAMLFAAAVGISVGILGAW"
BASE COUNT          464 a          851 c          796 g          510 t
ORIGIN      
        1 cgcagtcgcc gggtaatcgt gtctgctgtt gcctgcatgg caaagcggtt gaacggatcg
       61 ccctgccgca atggcaagtc caccagcacg gttcggtgca gccggtcacg cagcgagtcc
      121 agtcccgaaa tcgtcaacga ggttaccagg atgggagctc cctcctggat gttgaaggtg
      181 atgtacacgt cctgcggggt acgccgcacc agagtgtcga tcactgcgtc ggggtacccg
      241 cttcggcggt acagcacact gaggcggaca acatcgcggc ggaactcttg ttcatcgaag
      301 taccgctttg cgccgagtcc cagccagcgg agaaagccgc tggcgaacca gctcgagttg
      361 gtcgtggcga ttgccgtggc cagcgtctcg tcagtcagcg cccggttccc ttcgaacgag
      421 agctttcgga ccaccctgcc ggtctgctga gcattgagca gagcgggcaa tcccagcgcc
      481 agcacgcaca gccaccagcg tgccagtctc atgaatcaac gagaatgaac gatgtgaaat
      541 ctgctgccgg gaccgcgacc tcggaggcta tgtgatagga aataagacac tccgaaggca
      601 gcctcgcgct gccgcgagct gctgtatcga gttgacggcg tgttctaagc ccggtagttt
      661 gaccgtctta cgtcgtggtg tcaacgtcaa agcccccgcc ataagctcct ccacccgact
      721 ggctcatgca tcgactactg cttgcatcgg ctctgaccct cactgcctgt gccgaccagg
      781 gtggcggggc cgccctcaac tactatttca cttatgaccc ccgctcgttg gacccggcgc
      841 tttccaccga tgttccgacc ggcgaggtgg tctcgctgtt gttcgacaac ctgactcaat
      901 tcgacgccga tgcgcagctg aagcccagtc ttgccacccg gtgggaaacc gacccgtccg
      961 gcaggatcta cacctttcac ctgcgacaga acgccacgtt ccacgatggc cggccagtca
     1021 aggcaggaca ggtgcgtgcc tctttgcttc gggcgctggc accgggcacc accggcggac
     1081 gcgcgtggcc actctatccc attcggggag ctcgagcgta tgccgacgga gcgtcgaaag
     1141 atgtagacgg catctcggcc accaacgact ccactctggt cctgaccctc gaggagccgc
     1201 tgaacctgtt tcccaagctg cttgccatgc cggttgcagc catcgtgcca acgccggcac
     1261 caacggattt ggatcagcac ccgatcggca gtggaccctg gaagttcgtc tcctggtctc
     1321 acgacgatgc gatcgttctc gccaagaacg agaagtactg gggcggagct cccaaatcgg
     1381 atacgctccg catccggatc attcctgaac cgctcaccca ggctgcggaa ttcgaagccg
     1441 gccagctcag cgtggtggag gttccggtcg gcgagacccg acgctgggag gagtcgcaca
     1501 aaccggagct gcagcgccgc ccggcgcttc gagacttgta tgtcgccatc aatacgactc
     1561 gaggacccct gaaagatgtc agggtccgac gtgccctgaa ctatgcagtc gatgttccca
     1621 ccatgctcac gacggtgctg gccggccgcg gggttcgtgc cgcggggtcg ctccctcccg
     1681 gtgtgctggg ttacgattcc acccggactc cctatcgcta tgatccggca gaagccaagc
     1741 gcctgctggc ggaggccgga tatcccaacg ggtttgcggt gaagctgtgg cgcacgcagc
     1801 ggagcgagct ggcccgactc gcccaatcgc tgcaacaagc gctgggcgag gtcggggtgc
     1861 gaaccgaaat cgtggagcga gatgcctcga gtgcccgcgc tgcagtccgt cacggcgatg
     1921 ctgacctgtt cctgaccgac tggtggtgtg attatcccga cccggagaac ttcaactatc
     1981 cgctcttcca ttcgaggaac aaaggtccgg gcgggaatta cgccttcctc gccgattcgg
     2041 ccctcgatac gatgatcctc cgggctcggg caacccagga ttccgccgag aagctgcggc
     2101 tctcccggag catcgaccag cgcgtgttcg acttggcgcc gtggatcttc ctctggtttc
     2161 cggttgatct gtgggccacg cagcccgacg tccatggctg gaaaattcct ctggtggtga
     2221 ctggacagcg ctggatgcag gccgagcgcc gtcggtgagc cgctttctcc tgcagcgggt
     2281 cttgctgctg attcccacgc ttttcggcgt cctcctggtc accttcttgc tcctgtatgt
     2341 cgccccagga gatccggttc aagcgatggt cggagaacgc gccgatccgg agactctggc
     2401 gcggcttcgg gccgagctcc atctggacga tccactgtac cggcagttcg gccactatgt
     2461 cgggggcgtc gtccgaggga atctcggcac cagctacatc acccgacgtc ccatcatccg
     2521 cgatctcctc gagcgattcc ccgctacact gcggttggcc ggcgcggcaa tgctgttcgc
     2581 tgccgctgtt gggatcagcg ttggaatcct tggcgcctgg c
//
LOCUS       DASRPQ010000507         4066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4447358, whole genome shotgun sequence.
ACCESSION   DASRPQ010000507 DASRPQ010000000
VERSION     DASRPQ010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4066
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4447358"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            282..1127
                     /locus_tag="VFD73_06005"
     CDS             282..1127
                     /locus_tag="VFD73_06005"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HZI73570.1"
                     /translation="MVMLPLRDVRLPKATQQFYDGWLADLEEQLSAPGADWHKLARDL
                     LFQINYPGDRDYDGVLQDPKTPETTRVALLSLDPRNVTLEPEYYADVDPERYARVKPL
                     IWLWQGFDRSPIGGGNVHLGVRFRRILAQHIFARVGRNFKAFQFVEFSFGYNLEIGDD
                     VVVHRNVLLDDRGGITLGNRVSISDYANIYSHTHSIVDQRDVTNARTVLEDDVRITYH
                     ATVLAGVRVGRNAMVGANAVATKDVRPYHVNVGIPAKSIRIKPNAPPEAYVTERVVRS
                     HARES"
     gene            1162..3435
                     /locus_tag="VFD73_06010"
     CDS             1162..3435
                     /locus_tag="VFD73_06010"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI73571.1"
                     /translation="MAAIAAGALLLAVLAAGIISNPPLILSVPLGIVAGVLLGLSLWR
                     RSWELPLHIASAVLLAIVAWWTEHRVWWISLGSSLTILGTFWLALLRARQRTREAEVK
                     ADQLAVQVDRRISELFSLQELSYVLSESIQLDRVVDQVARYAARFLQADGAVVVLAEE
                     GGQVLRVVAASGSLEPLRGQANEESESALVRFAISRDRIEVAQGVETPTVDLIGGKMV
                     RSAAVAPLRAQGITMGALAVADRRGGAFTTEDLWLLSTVATNASVVLANSRLYEMVRR
                     SEEEWETAFNALVEGIAVVGPQRAILRANHALATIAEVPESELVGRNFCDLFPEASDA
                     VAALIDAIYKREKTAPLVVHLEQRQRVLRLTAAPLVGAEGGSVVILIEDVTEQRLLEA
                     QIIQNDKMASIGQLVSGVAHELNNPLTSITGLAELLLERPPHPELPREHLKVIHDQAE
                     RASRIVRNLLTFARKGVAEKTAVDLNDVVTRTSLLIVYELQLHGIELESKLSPDPVIV
                     LGDRYELQQVLLNLVTNAVQAVSQLPPERPRQIMLSTCRSGREAMLHVRDTGPGVPKH
                     HAPYLFTPFFTTKAPGEGTGLGLSLSYGLVKAHGGTLTYEPVPEGGAEFQITLPLFDT
                     DVAVDHEFVHRNGASNRSILVVDEDPAVYRLVSALFTPDGHSVEAARSAEQALRLAQE
                     REWDMIIADIRMAADAAESFPRALLHIRPEVRSRLVVACSGDDDLRASSEDDSFRRVR
                     KPFNPRDLKSVAREILQ"
     gene            complement(3429..>4066)
                     /locus_tag="VFD73_06015"
     CDS             complement(3429..>4066)
                     /locus_tag="VFD73_06015"
                     /inference="COORDINATES: protein motif:HMM:NF016906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NosD domain-containing protein"
                     /protein_id="HZI73572.1"
                     /translation="AGERRTMRPSRGNLIYRNDASGALRSGFGCSFGWGNTFLENRAD
                     SASTGFRLDHCGGTTVRSNTVIGARTAAVVSDHGSDNAILGNVLIGTPVAIEVGAPEN
                     PGDPSVRYRIDDNVISRVEQGIVLQRTTRAQLRGNLFDGVQDGLVLDGDGHASEVSGN
                     IFLRASRWFIDAPDLAAGGNYWATADAATATAKVKGRVSVLPWKPASAAGY"
BASE COUNT          732 a         1271 c         1294 g          769 t
ORIGIN      
        1 gctggcattg gtgtagtgca cctctccgta tcccccgatg gtagtggact cgctttggtc
       61 ttgggcgagg aggagggtgg ggagggagag accggccagg aggagagtgg cgggacgaag
      121 cgttcgcatg gcggtccgcg tcgaagacta gatgagaatc attttcatgt agaagcccta
      181 ctactttatt cccttttagc actggtgtca acactcgaaa ctgcgcatca ttggacggca
      241 gccagacttc catcactctc cctgggcacc ccgaggcccc aatggtcatg ctgccactgc
      301 gagatgtccg tcttcccaag gccacgcaac agttctacga cggctggctg gcagacttgg
      361 aggaacagct ctcggcgccg ggcgcggatt ggcacaagct ggctcgcgac ctgctcttcc
      421 agatcaacta tccaggggac cgggattacg acggagtgct gcaggacccg aagaccccgg
      481 agaccacacg ggttgcgctg ctgtcgctcg atcccaggaa cgtgacgctc gagcccgagt
      541 actatgccga cgtagacccc gagcgctatg cccgtgtcaa accgctcatc tggctttggc
      601 aggggttcga tcggtcgccg attggggggg gcaacgtgca tctcggggtg cggttccggc
      661 ggattctggc ccagcacatc ttcgcgcggg tcgggaggaa cttcaaagcc ttccagttcg
      721 tggagttttc gttcggctac aatctcgaga tcggagacga cgtcgtggtg caccggaacg
      781 tgctgctcga tgaccgaggt ggcatcacct tgggaaatcg ggtcagcatt tctgactacg
      841 ccaacatcta tagccacacg cacagcattg tggaccagcg ggacgtcacc aatgcccgta
      901 cggtgctgga ggacgatgtc aggatcacgt atcacgccac ggtgctcgcc ggcgtacgag
      961 tgggccgcaa cgccatggtg ggcgccaatg ccgtcgcgac caaggatgtt cgtccttatc
     1021 acgtcaacgt tggcattccg gccaaatcga ttcggatcaa accgaatgcg ccgcctgagg
     1081 cctacgtgac ggaacgagtc gtccgaagcc acgcccggga gtcctgaact gtcgcgtcgc
     1141 ccgcttcgcc cgccgatttc catggccgca atcgcggccg gtgctctgct ccttgccgtc
     1201 ctcgccgccg gcatcatctc caatccgcct ctgatcctga gtgtccccct gggcattgtc
     1261 gccggggtac tcctgggtct gtccctgtgg cggcgaagct gggaactgcc gctgcacatt
     1321 gcgagcgcgg ttcttctcgc catcgtggcg tggtggaccg agcatcgggt gtggtggatc
     1381 tccctggggt ccagcctgac aatcctggga accttttggc tggcgctgtt gcgggcgcgg
     1441 caaaggaccc gcgaggcgga ggttaaggcc gaccagctcg cggtccaggt agatcggcgc
     1501 atcagtgagc tgttttcgct gcaggagctg agctacgtcc tctccgaatc gattcagctg
     1561 gaccgcgtgg tggaccaggt cgcccgatat gcagcccgat ttctgcaggc cgacggcgcg
     1621 gtggtggtcc tcgcggagga aggtgggcag gtgctccggg tggtggccgc ctccggctcg
     1681 ctcgagccgc tgcgaggcca ggcgaacgag gagtcggaga gcgctctggt gcggttcgcg
     1741 atcagccggg atcgcatcga ggtcgcccag ggggtcgaga cacccacggt ggatctgatt
     1801 ggtggcaaga tggtgcggtc tgcggccgtg gcgccgctcc gggcccaggg aatcacgatg
     1861 ggcgccctgg cggtcgccga ccgaagggga ggcgcgttca ccaccgagga tctctggctc
     1921 ctctcaaccg tagcgaccaa cgcgtcggtc gtgcttgcca acagccggct gtacgagatg
     1981 gttcggcgaa gcgaagagga gtgggagacg gcattcaacg cgctggtcga gggaattgcc
     2041 gttgtcgggc cccagcgcgc cattctccgc gccaatcacg ccctggccac catcgccgag
     2101 gttccggaat cggaactcgt gggccggaac ttctgtgacc tctttcccga ggcatcagac
     2161 gccgttgccg cgctgattga cgcgatctac aagcgggaga agaccgcacc gctggtcgtt
     2221 cacctcgagc agcggcaacg ggtgctccgg ctgactgctg caccactggt gggagcagaa
     2281 ggcgggtcag tggtgatcct catcgaggat gttaccgaac agcgcctgct ggaggcgcag
     2341 atcatccaga acgacaagat ggcctcgatc ggacagctcg tgtctggtgt ggcgcacgag
     2401 ctcaacaacc cgctgacctc gatcaccgga cttgccgagc tgctattgga gcggccgccc
     2461 catcctgagt tgccccggga gcacctgaag gtcattcatg atcaggcgga gcgcgccagc
     2521 cgaatcgtcc ggaacctgct caccttcgcc cgaaagggag tggcggagaa gactgcggtc
     2581 gatctcaacg atgtcgtgac caggacgtca ttgctcatcg tgtacgagtt gcagctgcat
     2641 gggatcgagc tggagtcgaa gctcagcccc gaccccgtga ttgttctggg agaccgctac
     2701 gagctgcagc aggtcctgct caacctggta accaacgcgg tgcaggccgt cagtcagctc
     2761 ccgcccgagc ggccgcgcca gatcatgctc tccacctgcc ggtccggcag agaagccatg
     2821 ctgcacgttc gcgacactgg gcccggagtg ccgaagcacc acgccccata tctgttcact
     2881 cccttcttca ccaccaaagc accgggggaa gggaccgggt tggggctttc attgagctat
     2941 ggtctggtga aggcccatgg aggcacgctg acctacgaac cggtgccgga gggaggggct
     3001 gagtttcaga tcacccttcc gctcttcgat accgatgttg cggtcgacca cgagttcgta
     3061 caccggaacg gggcatcgaa tcgcagcatc ctcgtggtcg atgaagatcc cgcggtctac
     3121 cggctggtca gtgcactgtt tactcccgac ggccactcag tggaagccgc gcgctccgcc
     3181 gagcaggcgc ttcggctcgc ccaagaacgc gaatgggaca tgattatcgc cgatatcaga
     3241 atggctgcgg atgccgctga gtcgtttccc cgcgcgttgc ttcacatccg cccggaggtc
     3301 cgcagccgtc tcgtcgtggc gtgcagtggg gatgatgacc tccgggcatc cagcgaggac
     3361 gattccttcc gtagggtgcg caagccgttc aatccacgag acctcaagtc agtagcgaga
     3421 gagatccttc agtagcccgc ggcactcgcc ggcttccatg gtaaaacact gacccgcccc
     3481 ttcacctttg ccgtcgccgt tgcggcatct gccgttgccc aataattgcc gccggctgca
     3541 agatcgggag cgtcgatgaa ccagcgcgaa gcccggagaa agatgttccc gctgacttcg
     3601 ctggcgtggc cgtcgccatc gagaaccaac ccgtcctgga ccccatcgaa cagattgccc
     3661 cgcaattgag cccgagtggt gcgctgcaac acgatcccct gctccacccg ggagatgaca
     3721 ttgtcgtcga tacggtatct cacgctcgga tcgccgggat tttcgggagc gccgacctcg
     3781 atcgccaccg gagtgccgat gagcacgttg cccaggatcg cgttgtcgga tccgtggtcg
     3841 ctcacgactg cagcggtgcg ggcccctatg acagtgttgc tccggaccgt agtaccgccg
     3901 caatgatcca atcggaaccc ggtggacgcg ctgtcggccc gattttccag gaacgtgttt
     3961 ccccagccaa aggagcaccc aaacccgctt ctcagcgcgc cactggcatc gtttctgtag
     4021 atgagatttc ccctgctggg acgcatggtc cggcgctctc cagcca
//
LOCUS       DASRPQ010000508         2121 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3505584, whole genome shotgun sequence.
ACCESSION   DASRPQ010000508 DASRPQ010000000
VERSION     DASRPQ010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2121
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3505584"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1548)
                     /locus_tag="VFD73_06020"
     CDS             complement(<1..1548)
                     /locus_tag="VFD73_06020"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI73573.1"
                     /translation="MALKGRRSTPEERLRAVQLLKEGNEAAVVARMFSVSRAMLFRWQ
                     QKYDQGGPVALETKKTPGPASRLSPTQLSKLYAIITGSDPRQLEFDFGLWTRKIIREL
                     IRREFGVKVSEVQVGRLLKEMGLSPQRPLYRAYQQDPERVAEWKKSVYPKIRKLAAEE
                     GASIFFADEASIRTDHHAGTTWAPAGQTPVVITTGERRSVNMVSAISSRGELRFRVQE
                     GTMNAAKFVDFLKALLDSVPGKIFLIVDGHPVHKAKKVSEFVKEKADGRLSIFFLPPY
                     SPDLNPGEWVWNNVKNDRIGRGVIMSADDLKAKAIGALRRLQKLPDIVRGFLRDPKLA
                     YILGLHERTTCEVYKVIFSLVTLRSHVNQTSCRIIGMSGCLDAGMSSMIVVMYVVRVP
                     NRRSPPAVLLRESYREDGKVKNRTLANLSSWPEAKVDALTRVLKGAPPPAAPLDEAFE
                     ITRSLPHGHAAAVLGTARQLGLEELIDPAPSRQRDLVAAIAVAQVIAPDSKLAIARGL
                     REETAASS"
     gene            1727..>2121
                     /locus_tag="VFD73_06025"
     CDS             1727..>2121
                     /locus_tag="VFD73_06025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73574.1"
                     /translation="MTELEHQGQAARQRALESARRSRAAILELAVRAEYLLGEALAHD
                     LAANEEAAAILQEHMTWRVPIEVKLKLLSQAMDTYYDISDTFPFVVPVLTRLFQVRNI
                     LAHSLETPVPEDRHEIGFLSVHRGRITEHS"
BASE COUNT          395 a          672 c          640 g          414 t
ORIGIN      
        1 ggagctggcc gcggtctcct cccgcagccc gcgggcgatg gccagcttgg agtccggcgc
       61 gatcacctgc gcgaccgcta tcgcggccac caggtcccgc tgccgggacg gcgccgggtc
      121 gatcagctcc tccaggccca gctggcgggc cgtgcccagg acggcggcgg cgtggccgtg
      181 cggcaggctg cgggtgatct cgaacgcctc gtcgaggggg gcggcgggcg gcggggcgcc
      241 cttcagcacc cgggtcagcg cgtcgacctt ggcctcgggc caggatgaca ggttggccag
      301 ggtccggttc ttgaccttgc cgtcttcgcg gtagctttcc cgcagcagga cggcgggggg
      361 tgatctccgg ttcggcaccc tgaccacgta catgaccacg atcatactgg acatgcccgc
      421 atctaagcag ccagacatcc cgatgatacg gcaggaagtc tgatttacat gactacgcag
      481 tgttactaag gaaaatatga ctttgtagac ttcgcatgtc gttcgctcgt gtaatcccag
      541 gatgtaggcg agctttggat cccggaggaa tccgcgtacg atatcgggga gtttctggag
      601 gcggcgaagc gcaccgatgg ccttcgcctt gaggtcgtcc gcgctcatga tgacgccgcg
      661 gccgatcctg tcgttcttca cgttgttcca gacccattca ccggggttaa gatccggcga
      721 gtacggcggc aggaagaata tactcaggcg cccgtcagcc ttctccttca cgaactcgct
      781 gaccttcttg gccttgtgca ccggatggcc gtccacgatg aggaaaatct tccccgggac
      841 actgtccagc agcgccttca ggaaatcgac gaacttcgcc gcgttcatcg ttccttcctg
      901 aacccggaaa cgcagctcac cgcgcgagga aatcgccgat accatgttca ccgacctccg
      961 ctcgccggtc gtgatgacga ccggtgtctg cccggcgggc gcccacgtgg tcccggcgtg
     1021 gtgatcggtc cgtatgctgg cctcatctgc gaagaagatg ctcgcgccct cctcggctgc
     1081 cagcttgcgg atcttcgggt aaacggattt cttccattcc gccacgcgtt ccggatcctg
     1141 ctgataagcg cggtacagcg gccgctgcgg cgacaggccc atctccttga gcagccggcc
     1201 cacctggacc tctgagacct taaccccgaa ttcccgccgg atcagctcgc ggatgatctt
     1261 ccgcgtccac agcccgaagt caaactccag ctgccgcggg tcgctcccgg tgataatcgc
     1321 gtataacttc gacaattgcg tcgggctcag ccgggaggca ggcccaggcg tcttcttcgt
     1381 ctccagcgcg accgggccgc cctggtcata tttctgctgc caccggaaaa gcatcgcccg
     1441 ggaaacactg aacattctcg cgaccactgc cgcctcgttt ccctctttga gaagctgcac
     1501 cgcccggagc cgttcctcgg gtgtcgaacg tcgtcctttc agcgccataa gaccaatata
     1561 tcaggcagag aggcccgagt ctacaaacct atgaattgat tagtaagtgt cagagcagca
     1621 cacccaggat ttcgcgagtc cgcgacgcgc gcaagatctg ggaagttgct gcgatcatga
     1681 cagatctggc gttcaggcca gcagacaacc gggctgagga gtccccatga ccgagctgga
     1741 acatcagggc caggcggcaa ggcagcgcgc gctcgaaagc gctcggcgga gtcgtgcagc
     1801 gattctggag ctggcggtgc gcgctgaata tctgctgggt gaggccctgg ctcacgacct
     1861 cgctgccaat gaggaagcag cagcaatact ccaggagcac atgacgtggc gggttccaat
     1921 cgaggtaaaa ctgaagcttc tcagccaggc gatggatacc tactatgaca tctccgacac
     1981 atttccgttt gttgttccgg tgcttaccag gctgttccag gtacgaaaca ttctcgccca
     2041 ttcccttgag acaccagtcc cggaagatcg gcatgagatt ggtttcctga gtgtgcacag
     2101 agggcggatc acggaacatt c
//
LOCUS       DASRPQ010000509         2723 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_375034, whole genome shotgun sequence.
ACCESSION   DASRPQ010000509 DASRPQ010000000
VERSION     DASRPQ010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2723
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375034"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..248)
                     /locus_tag="VFD73_06030"
     CDS             complement(<1..248)
                     /locus_tag="VFD73_06030"
                     /inference="COORDINATES: protein motif:HMM:NF013097.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HZI73575.1"
                     /translation="MTGAPGEMPFLDHLEELRLRILRSLGAVVVGCAIGLWLVQRYQL
                     VNLLKAPIAPYLTGGKLVVTSPTDPVMIVLELGLMVGLV"
     gene            complement(271..1053)
                     /locus_tag="VFD73_06035"
     CDS             complement(271..1053)
                     /locus_tag="VFD73_06035"
                     /inference="COORDINATES: protein motif:HMM:NF024915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI73576.1"
                     /translation="MSRTVRLGLWWGAALMGCLAACVTKSDVQRVQDDIALFKAETAR
                     RDSARAAQLNEVIRAQQRVLDSLTTSRKAVGQLRGDLASDLYNIQQQLVQLQELTGQS
                     QQRLSEIRTQMEARREQIESTTPADTGRGASTSQASADQMYEASLAQLRRGSSSTARL
                     GLREMLRVYPNSERAGDALYFIGQSFAAENPDSAAAYYDQVVQRYPTSSRAASALYNL
                     GLLAERRKQTSKARDAYQRVVQKYPQSDEAALARDRLKALGR"
     gene            complement(1050..1625)
                     /gene="pal"
                     /locus_tag="VFD73_06040"
     CDS             complement(1050..1625)
                     /gene="pal"
                     /locus_tag="VFD73_06040"
                     /inference="COORDINATES: protein motif:HMM:TIGR02802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HZI73577.1"
                     /translation="MRVPSLLMLLSTAAFAVACGGKAAPEEPAPQPQPAAEPAPAPAP
                     ADDSAERERLEKERVAREAAEKARAVAADLAAMINFDYDQAVVRQADQATLDRKAAIL
                     AANPKLKIRIAGHADARGSDEYNLALGNRRAAAAKRYLENKGVDGSRMDVVSYGEERP
                     LNPGNDETAYAQNRRDEFEVTAGGDSLVAPQ"
     gene            complement(1640..>2723)
                     /locus_tag="VFD73_06045"
     CDS             complement(1640..>2723)
                     /locus_tag="VFD73_06045"
                     /inference="COORDINATES: protein motif:HMM:NF022113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LpqB family beta-propeller domain-containing
                     protein"
                     /protein_id="HZI73578.1"
                     /translation="SPGAADPPNGVNYALYKSLGAQYAVELNESPGGGVTARLHDLNE
                     GRMQSQKTVPLPSPSAPDYRLEVHRLADEVARWASGQPGPAASRLLFVSGGRVYRVDS
                     DGADIAPITPAGQTALSPAWSPDGQRMAFTLLGEGRGGIVVQNVSGGNSFLVPGSQTA
                     LNITPVFSPDTRTLAFAHSDERGTDIYIANIIDRCCAQRLTVGRFADNLSPTFSPDGR
                     RIAFISTRAGPPQLYVMAADGTDQELLAPFDFGATGSTNAPEWSPDGANVVFHREVSG
                     SPQIFLVDVAGRRVRQLTSSGRNEDPTWAPDGRHVAFISDRSGRRQIWIVDVETGRVR
                     QLATPGAARLPAWSRRLGRTTVAPNP"
BASE COUNT          464 a          898 c          873 g          488 t
ORIGIN      
        1 accaggccca ccatcaggcc gagctccagc acgatcatga ccgggtcggt cgggctggtc
       61 accaccagct tcccaccggt gagatatggt gcgattggtg ctttgaggag attgaccagc
      121 tgataccgtt gaaccagcca cagaccgatg gcgcaaccta cgacgacggc accaagggac
      181 cgaagaatgc gaaggcggag ttcctcgagg tgatcgagga agggcatttc cccaggagcg
      241 ccggtcatga aggggcgggg acgcccgggc ttatcgcccg agcgccttca gtcgatcacg
      301 agccagcgcc gcttcgtcgg attggggata cttctggacc acccgttgat acgcatctct
      361 cgctttgctg gtctgcttcc ggcgttcggc cagaagaccc aaattgtaca gcgccgaagc
      421 ggcccgcgag gacgtcggat accgctgcac cacctgatcg tagtaggcgg cagccgagtc
      481 cgggttctcc gccgcgaaac tctgcccgat gaagtagagc gcgtcgcccg cccgttcgct
      541 gttgggatac acccgcagca tctcgcgcag cccgagccgc gccgtcgagc tgctgccccg
      601 gcgcagttgg gccagggaag cctcatacat ctgatcggcc gaagcctgcg atgtggacgc
      661 gccgcggccg gtatcggccg gagtggtaga ctcgatctgc tcgcgtcggg cctccatctg
      721 ggtacgaatc tcgctgaggc gttgctggct ttggccggtg agctcctgca actgcaccag
      781 ctgttgctgg atgttgtaga ggtcgctggc cagatcgccg cggagctgtc cgaccgcttt
      841 ccgactggtg gtgagcgaat ccagaacgcg ctgctgggcc cgaatcactt cgttgagctg
      901 ggccgcgcgg gcggagtctc gacgcgcagt ctccgccttg aagagcgcga tgtcgtcctg
      961 cacccgctgc acatcactct tggtgacgca ggccgccagg cagcccatca acgctgctcc
     1021 ccaccacagc cccaggcgca ccgtacggct cactggggag cgaccaggct atcgccgccc
     1081 gccgtcactt cgaactcgtc gcggcggttt tgggcatagg ccgtttcgtc atttccggga
     1141 ttgagggggc gctcctcgcc ataggagacg acgtccatcc gggatccgtc gacacccttg
     1201 ttctcgaggt accgcttggc ggcagccgcg cgacggttcc ccagcgccag gttgtactcg
     1261 tcagagcctc gcgcatcggc atgaccggcg atccggatct tgagcttcgg gttggccgcg
     1321 agaatcgccg ccttacgatc cagggtagcc tgatccgcct gacggacgac cgcctggtcg
     1381 tagtcgaagt tgatcatggc cgcgagatct gcggcaacgg cccgcgcctt ttcggccgcc
     1441 tctcttgcca cccgctcctt ttccagacgc tcccgctccg cactatcatc cgctggggcg
     1501 ggtgccggcg ccggttcggc cgccggttgg ggctggggtg ccggctcctc cggcgccgct
     1561 tttcctccgc aggcgacggc aaaggcggcg gtggataaga gcatcagcag agaaggtact
     1621 cgcatcatca ctccgcattt catgggttgg gggcgacggt ggtccgcccg aggcggcgcg
     1681 accacgcggg aagccgggcg gcccctgggg ttgccagttg ccgcactcgc ccggtttcga
     1741 catcgacgat ccagatctga cgacggccgc tgcgatcgga gatgaacgcg acatgccggc
     1801 catctggcgc ccaggttggg tcttcattcc ggccggagga cgtcagctgc cgcacccgcc
     1861 ggcccgcgac gtcgaccagg aagatttggg ggctaccgga aacctcacga tggaagacta
     1921 cattggcacc gtcgggggac cattcaggag cattggtgct tccggtggca ccaaagtcga
     1981 acggcgccag cagctcctgg tcggttccat ccgctgccat cacgtacaac tggggcggcc
     2041 ctgcccgtgt cgaaataaac gcgatgcgcc gcccatctgg cgaaaacgtt gggcttaagt
     2101 tgtcggcgaa gcgtcccacg gtcaagcgct gcgcgcaaca acgatcgatg atgttcgcga
     2161 tatagatatc ggtccctcgc tcatccgagt gggcaaaggc cagggttcgc gtatcgggcg
     2221 aaaagaccgg tgtaatgttg agtgccgtct gcgatccagg caccagaaaa ctgttcccgc
     2281 cagacacgtt ctgtaccaca atgcctccgc ggccttcacc cagcagcgtg aatgccatcc
     2341 gctgtccgtc gggagaccac gctggagaga gggcagtctg ccccgccggc gtgatcggcg
     2401 cgatgtccgc tccgtcgcta tctacccggt acacccgtcc accagagaca aagagaagac
     2461 gactggcggc cgggcccggc tgcccgctgg cccagcgcgc aacttcgtcc gccaggcgat
     2521 ggacctccag tcggtagtcg ggcgcactgg gcgaagggag cggaacggtc ttttgactct
     2581 gcatccgtcc ctcgttgaga tcatgcagcc gggcagtcac accgccgcca ggactctcgt
     2641 tgagctcgac tgcgtactga gctccgagag acttgtacaa cgcgtagttc accccgttcg
     2701 gcgggtctgc cgcccccgga ctg
//
LOCUS       DASRPQ010000510         1060 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3202258, whole genome shotgun sequence.
ACCESSION   DASRPQ010000510 DASRPQ010000000
VERSION     DASRPQ010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3202258"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(257..691)
                     /locus_tag="VFD73_06050"
     CDS             complement(257..691)
                     /locus_tag="VFD73_06050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73579.1"
                     /translation="MTEENWLDLGAMAEVELTSEDPAYPIEGALLPDGQSVGWRAAAP
                     GRQSIQLLFHQPQRLRRILLRFEEPAAERTQEFALRWSPDGGRSSRDIVRQQYTFSPS
                     GSTSEVEDLNVDLPSVTALELTIIPDQGRGHAFASLAEWRLA"
     gene            complement(744..>1060)
                     /locus_tag="VFD73_06055"
     CDS             complement(744..>1060)
                     /locus_tag="VFD73_06055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73580.1"
                     /translation="RMRARLRTARRAVDRRATATRPRLRQRPARPADPGSPNLEEARE
                     RESLRQVFQELGTSYRRYRSQVGGPVAPGLRDAAYNFRAEPSLASLVTVAGFLDELKL
                     LD"
BASE COUNT          176 a          352 c          353 g          179 t
ORIGIN      
        1 accagggcgt accccggact gtagctcact cccgctgctg cgtcgaaacg tcgattgaag
       61 ctgatggtga ggcgggcgcc gaccgccacg cccagccttt gcccgacgtg gatctggcta
      121 ttccggattg agaaccgggt cggcagagaa aggttggcct gggggcggag gctgagatgt
      181 tgcgagtgga gaggcgcggt ccagcagcat gcgaataggg ccgcccatcc caggacggcc
      241 ctcgatcggc cctgcgtcag gcgagtcgcc actccgccag tgaagcaaac gcgtggcccc
      301 gaccctggtc aggaatgatc gtcagctcca gcgcggtgac ggatgggaga tcgacgttca
      361 gatcttccac ctcgctggtc gaccccgagg gactgaaggt gtactgttgc cgcacgatgt
      421 cccgggacga gcggccgcca tccggcgacc agcggagggc aaactcctgc gtccgctccg
      481 cggccggctc ctcgaagcgg agcaggattc gccgcagccg ctgcggctga tggaacagca
      541 actgaatgct ctggcgtccc ggagcggccg cccgccagcc aaccgactgc ccatccggaa
      601 gcaatgctcc ctcgatagga taggccgggt cctcggatgt cagttcgacc tctgccatgg
      661 cgccgaggtc caaccagttc tcctcggtca tggttctttg ctcgggggca gtaactaacc
      721 gcttctgcat tgggatcctc gtctcagtcc agcagcttga gctcatccag gaacccggca
      781 accgtgacca gcgaagccag gctgggctcc gcccgaaagt tgtaggcagc gtctcgcagt
      841 cccggcgcca ccgggcctcc gacctggctg cggtagcggc ggtaggaggt ccctaattcc
      901 tggaatactt gcctgagcga ttcccgctct cgggcttcct ccagattggg cgagccagga
      961 tcggccggac gcgctggccg ttgcctcaag cgcggtctgg tggctgtcgc ccgccggtcc
     1021 acggcgcggc gcgcagtgcg gagccgcgca cgcatccggt
//
LOCUS       DASRPQ010000511         1030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_999483, whole genome shotgun sequence.
ACCESSION   DASRPQ010000511 DASRPQ010000000
VERSION     DASRPQ010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1030
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_999483"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..624
                     /locus_tag="VFD73_06060"
     CDS             <1..624
                     /locus_tag="VFD73_06060"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HZI73581.1"
                     /translation="AELAAVLCLLAGCRLDQSVTDRALERMSEQPRYDVYQSSRFFRN
                     GMAMQLPPAGTVARDAVLDPARATGRTASAGYLTAVPLSVTPQLLQMGRSRFHIYCAV
                     CHGAGGYGGSIVASNLAERRPPSLRSAAVSSLPAGFFYDVIRRGLGRMPSYAAELPVD
                     QRWAVVAYIQQLQRTPKAGPGEREDSVRGAELRTQDSLLQASGDSLR"
     gene            621..>1030
                     /locus_tag="VFD73_06065"
     CDS             621..>1030
                     /locus_tag="VFD73_06065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73582.1"
                     /translation="MNADRITRAAFVAGLVGLLLGVLGSFLDSHQAYLSYLTAYAAGV
                     SLAVGALMLVMIGYLTGARWFVAFRPLALRVAATLPLFALLFLLILPGLHQLYPWVPP
                     LDRLSPDVQQEIRQKQSYLNVPGFLLRALIYFAV"
BASE COUNT          145 a          346 c          323 g          216 t
ORIGIN      
        1 gcggagcttg ctgcggtact ctgcctgctg gcagggtgcc gattggatca gagcgtcacc
       61 gaccgcgccc tcgagcggat gagcgaacag ccgagatacg acgtgtacca gtcgagccgg
      121 ttcttccgaa atggaatggc catgcagctt ccgcccgcgg gaacggtggc gcgagacgcc
      181 gttctggacc cggcccgtgc aactggccgg accgcatcgg ctggctatct caccgctgtg
      241 ccgctgagcg tcacgcccca gctcctgcag atgggccgct ctcgtttcca catctactgc
      301 gccgtgtgtc acggcgctgg cggttacggg ggcagcatcg tcgcgagcaa ccttgccgag
      361 cgtcggcctc cctcactccg ctcggcggcg gtgagctcac tcccggccgg gtttttctac
      421 gacgtgattc gccggggcct cgggcgcatg ccgtcgtatg ccgcggagct tccggttgat
      481 caacgctggg ctgtcgtcgc ctatatccag cagctgcagc gaacgccgaa ggcaggtccc
      541 ggtgaacgcg aagattcggt ccggggagct gagctccgca cccaggactc attgctccaa
      601 gcctcggggg attcattgcg atgaatgccg accggatcac ccgcgctgct ttcgtcgcag
      661 gactggtggg cctgctgttg ggtgtactcg gcagcttcct cgactcgcat caagcctacc
      721 tctcctacct gacggcttat gcggccggtg tgagcctcgc ggtcggcgct ctgatgctcg
      781 tcatgattgg ttatctgacc ggcgcgcggt ggttcgtggc ctttcggcca ctggcccttc
      841 gggtcgcagc cacgctgccg ctcttcgcgc tgctctttct gctgattctg ccgggacttc
      901 accaactcta tccctgggtc ccaccgctcg accggctgag cccggatgtt cagcaggaga
      961 ttcgtcagaa gcaaagttac ctgaacgtgc ccgggttcct gctgcgcgcc ctcatctact
     1021 tcgccgtctg
//
LOCUS       DASRPQ010000512         1161 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3506088, whole genome shotgun sequence.
ACCESSION   DASRPQ010000512 DASRPQ010000000
VERSION     DASRPQ010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3506088"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            472..978
                     /locus_tag="VFD73_06070"
     CDS             472..978
                     /locus_tag="VFD73_06070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73583.1"
                     /translation="MGKRLVILGPVIALMALVVGAVSPALGSSSHGSASTSSDEQQTI
                     RVTAVFTEFDANIDVGAPGFSLGDEVVFSGNLLRHGQQVGRIGVVCTFVSTANADRVE
                     AQCPTTSILPGGQITTQGTIVNRSLNFTLPITGGSGQFQGAGGQVVSRDISTPTQPQV
                     ELTFHLEF"
BASE COUNT          214 a          376 c          361 g          210 t
ORIGIN      
        1 gagctcacca caccccaggc ctgatcagag cccatcgcga cgagccgccg cctagagaca
       61 cggcccgcag ccagccagca tgccatttcc caaggtcaga ccacgatccg tgactctagc
      121 cgagccgaat tacgcggaac ccgggcatgc cgcagttaaa ctatgccaca gattcccctg
      181 tgggccactt ggcccctgta acccagcatc gcaactcgcg cgtgcaggaa cgatgcagga
      241 cgtgtgcaga tggtatggag atcttcctcc atgcggtctt cacgagaccg cgctggacgt
      301 cgcatacggc ctgtgacctg gaccttcgag ttgcgaagtc tcggtgatgc ttgacacttt
      361 gagttcctgt accggcccgc caaaggacct ggcaggccgt ttacaggacc aagcggcagg
      421 tgtaggactg cctcaaaggc catcacgcga atggtcggcg aggagggcac catggggaag
      481 cgcttggtca tacttggccc ggtcatcgcg cttatggcct tggtggtcgg agcggtcagc
      541 ccggctttgg gatcatcgag tcacgggtcc gcgtcgacgt catccgacga acagcagacg
      601 atccgcgtga ctgccgtgtt cacggagttt gacgcaaata tcgacgtcgg cgctccgggc
      661 ttcagccttg gtgacgaggt cgtgttctcg ggcaacctgc tgcggcatgg ccagcaagtg
      721 ggccgtatcg gcgtggtatg cacgtttgtg tccacggcca acgcggaccg ggtagaggcc
      781 cagtgcccca cgacctcgat cctccccggt ggacagatca caacccaagg cacgatcgtc
      841 aacaggtcgc tgaacttcac gctgccgatc accggtggct ccggtcagtt ccagggcgca
      901 ggcggacaag tggtctctcg cgacatttcg acgccgacgc agccccaggt cgagctgact
      961 ttccacctgg agttctgaca gcttagttgc gtcaggcgct gcggccaggt ctgggggtgg
     1021 caccccccga acccctcgca gtgcagtgag caagggggcc ttcccacggg cgggccgccg
     1081 ccaccctcgg cgcgcttctg cgggtcatcg ctggtagttc agcgagccgc cgtaaccagc
     1141 gaggcagatc tctcacggct t
//
LOCUS       DASRPQ010000513         2914 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2578774, whole genome shotgun sequence.
ACCESSION   DASRPQ010000513 DASRPQ010000000
VERSION     DASRPQ010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2914
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2578774"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..345)
                     /locus_tag="VFD73_06075"
     CDS             complement(<1..345)
                     /locus_tag="VFD73_06075"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HZI73584.1"
                     /translation="MSDLEVVALPNGQFAENCYLLADTGSGEAVIIDPGEESDLFLGE
                     LRRRAWQLRAIWLTHAHIDHIMGVGAVHRATGAPIHLHPSDRPLYDALPQYGSWVGVD
                     VPAAPEPQVDLQA"
     gene            complement(338..1303)
                     /gene="trxB"
                     /locus_tag="VFD73_06080"
     CDS             complement(338..1303)
                     /gene="trxB"
                     /locus_tag="VFD73_06080"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HZI73585.1"
                     /translation="MARSEFDVIIVGGGPAGLCAAMYAGRGLLHSVLIERGVPGGELL
                     NTEWIDDYPGFEHVLGRQLADLMTAHAVKFGADIRQDTVESIVRGEDEIFEVTTGLGQ
                     IYRAPAVILTAGGTPNKLEVPGELEYAGRGVSYCAVCDGAFFKGETLAVIGGGDAAVE
                     EADYLTRYGQKVYVVHRRGEFRASKILQERLFANPKIEVIWNKRVLEFLGTPAGLKSV
                     ELEDTVTGERTSLAATGAFVFIGFRPNTGLIKQHVAHDPSGYLITDERMMTSVPGLFA
                     AGDVRSQLTRQITTAVGDATTAAVAVEKYLKDRKSRSTIKASVSV"
     gene            complement(1371..2138)
                     /locus_tag="VFD73_06085"
     CDS             complement(1371..2138)
                     /locus_tag="VFD73_06085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73586.1"
                     /translation="MVDGSSSRVALRDIVIVGGGCYGSFYAGQLERAREQGRADYRQL
                     LIVDRNSECEFASRLGTGPFRRLVVEEWSAFFDQFLGAASAPAPGEPGDAIVPSPLMP
                     HLMSEWLFRRAQLRWPGRPIEICAPPVGPGTPYDVSAPDGTRYISYADWLCPTHCIEP
                     ALCPVIRAPRTWDIADALQRLSPRIPTTDPTAGPVLFQCLHRVFGVGMFDVASVLDGE
                     NVMVKAGLEGSPVDILVGTISHCHGAVSLLRLGAANS"
     gene            complement(2116..>2914)
                     /locus_tag="VFD73_06090"
     CDS             complement(2116..>2914)
                     /locus_tag="VFD73_06090"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZI73587.1"
                     /translation="SPRFVDYRRPCSHCPGRRRAALMELQGKVALVTGAGRRLGRAMA
                     LALAQRGMTLAIHHHSSSEGARELEKQIVAGGGRAARFPADLADAEAARRLPQQVVTA
                     LGQLDVLINSAAIMRKLGLEETTPRDWDEILSLNLRSVFFCTQGAAPALRRSRGKVVN
                     LADLAGMEPWPGFAAHSVSKAGVVMLTKVLARSLAPDVTVNAIAPGAVLVPEDYSEDE
                     RQRLARAAPLRRLGSPSDVIAALLYLLEGGDFVTGEVLTVDGGRLLK"
BASE COUNT          554 a          965 c          917 g          478 t
ORIGIN      
        1 ggcttgcaga tccacctgcg gctctggggc ggcggggacg tccacgccga cccagctgcc
       61 gtactgagga agggcatcgt acagcggccg gtcggatgga tgtaggtgaa tcggtgcacc
      121 cgtcgcacgg tgcacggcac cgactcccat gatatggtcg atgtgggcgt gcgtcagcca
      181 gatggcacgt aattgccaag cacggcgccg aagctcgccc aagaagagat cggactcttc
      241 ccccggatcg atgatcaccg cctccccgct gccggtgtcc gccagcagat agcagttttc
      301 cgcgaactgc ccgttgggca gggcaacgac ctccagatca gacactgacc gaggccttta
      361 tggtggaccg gctctttcgg tccttcagat acttctcgac ggccacggcc gcggtggtgg
      421 catccccaac ggcggtggtg atctggcgag tcaattgcga gcgcacgtcg ccggccgcga
      481 acagacccgg gacggacgtc atcatccgct cgtccgtgat caggtaccca ctgggatcgt
      541 gggccacatg ttgcttgatc aggccggtat tgggacggaa accgatgaac acgaatgcac
      601 cggtagctgc gagagacgtc cgctcgccgg tgacggtatc ctccagctcg acgctcttga
      661 gtccggccgg cgtccccaga aactccagca cccgcttgtt ccagatcacc tcgatcttgg
      721 ggttggcgaa gagccgctcc tgaagaatct tggaggcccg aaactcaccg cgacggtgga
      781 cgacatacac cttctgccca taccgggtca ggtagtccgc ctcctcgacg gcagcatcgc
      841 cgccgccgat gacggccagg gtctcgccct tgaagaacgc tccgtcgcac acggcgcagt
      901 aggagacgcc tcgtccggca tactccaact cgccggggac ctcgagtttg ttcggagttc
      961 ctcccgccgt caggatgacc gcaggagcgc ggtagatctg cccgagaccg gtggtgacct
     1021 caaaaatctc gtcctctcct cggacaatcg actcgaccgt gtcctgccgg atatcggcac
     1081 cgaactttac ggcgtgtgcc gtcatcaggt cggccaattg ccgacccagc acgtgctcga
     1141 aaccggggta gtcgtcgatc cactcggtat tcaacaactc tccgccggga accccgcgct
     1201 cgatcagcac ggagtggagc agcccgcgtc cagcatacat ggcagcacag agcccggcag
     1261 gacccccgcc tacgatgatg acatcaaact cgctccgcgc catgccttct cccgtgagcg
     1321 ttctgggcgt tcgcctctcc agaatataga acgcccaagg gttcccgaag ctaggagtta
     1381 gctgctccca gccgaagcag gctcaccgca ccatggcaat gggagatagt cccgaccaga
     1441 atgtctacag gggagccctc caaccccgcc ttaaccatca cattttcccc atccagcacc
     1501 gatgcaacat cgaacatgcc gaccccaaac acccggtgaa ggcactgaaa gagcaccggg
     1561 cccgcggtcg gatcggtggt tggaatccga ggcgagagcc gttgcagcgc gtcggcaatg
     1621 tcccaggtcc gaggggcccg gatcacagga cacagcgcgg gctcgatgca gtgggtcggg
     1681 cagagccagt ctgcgtagga gatgtaccgg gtgccgtcgg gggcggagac atcgtaggga
     1741 gtgccgggcc ctacgggtgg cgcacaaatc tcgatcgggc ggccgggcca gcgcagttgc
     1801 gcccgccgaa acagccattc tgacatgagg tgcggcatga gcggcgacgg tacgatggca
     1861 tcgcccggct cgcctggagc gggcgcagag gcagctccca gaaactgatc gaagaaggcc
     1921 gaccattcct ccaccaccag acggcggaat ggccccgtgc ctagccggct ggcaaactca
     1981 cactcagagt tgcgatcgac gatgaggagc tggcgatagt cggcgcggcc ctgctctctg
     2041 gcccgctcca gctgcccggc gtagaagctg ccgtagcatc caccgccgac aatgacgatg
     2101 tcgcggagtg cgactctact tgaggagccg tccaccatcg acggtcagga cttcaccagt
     2161 gacgaagtcg cctccttcca gcaggtagag tagagccgcg atcacgtctg acgggctacc
     2221 cagacgccgc aatggagcgg ctcgcgccag ccgctgacgc tcatcctcgg agtagtcttc
     2281 cggcaccagc accgccccgg gggcaattgc gttgaccgtc acatccgggg cgagcgagcg
     2341 cgccagcacc tttgtgagca tgacgacgcc cgccttgctc accgagtgcg ccgcaaaccc
     2401 gggccagggc tccatgcctg cgagatcggc aaggttgacc accttgcccc ggcttcgtcg
     2461 gagcgcggga gccgctccct gggtacagaa gaagaccgac cggaggttga ggctcagaat
     2521 ctcgtcccag tcgcgaggtg ttgtctcctc gagaccgagc tttcgcatga ttgcggcgga
     2581 gttgatcagg acgtcgagct gtcccagtgc ggtgacgacc tgctgcggca ggcgcctggc
     2641 cgcctcggcg tcagcgagat cggcgggaaa gcgggcggcc cggccgccgc ctgcgacgat
     2701 ctgtttctcc agctcgcggg cgccttcgct ggaagaatga tgatggattg caagagtcat
     2761 tccccgctgg gccagtgcca gtgccatggc acggccgagc cgtcgccccg cacccgtgac
     2821 cagcgcgact tttccctgaa gctccatcag tgccgcccgg cgcctgccgg ggcaatggga
     2881 acaaggtcgc cggtaatcga cgaaccgggg agag
//
LOCUS       DASRPQ010000514         1045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1313088, whole genome shotgun sequence.
ACCESSION   DASRPQ010000514 DASRPQ010000000
VERSION     DASRPQ010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1313088"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            279..761
                     /locus_tag="VFD73_06095"
     CDS             279..761
                     /locus_tag="VFD73_06095"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZI73588.1"
                     /translation="MAKKAQAIPRGYHTVTPSLVVAGAAKALEFYKKAFGAEERSRFP
                     GPDGSIMHAEILIGDSVVMLADEMPEQGGRGPKSIGGTPVSFFVYRENVDAEWKRAVD
                     AGAKEIMPLADQFWGDRTGCLEDPFGHHWWLAQHIEDLTPDEMQKRGEAFFSQMQHAS
                     "
BASE COUNT          212 a          319 c          318 g          196 t
ORIGIN      
        1 ccaccagcgg tgtctttcgg ttcggctcca acggctgcca cgtagagaag ttcgccggcc
       61 cggactcgct catcatctcc tgagccgagg atcggaccag cgccggctca ggtgcccgat
      121 gccttcctcc aaacaattgc gccagaaagt gttaacaggg aggcctgaaa tcggaaattt
      181 gtgacattcg atgttcccat ccgagacatt ttgagcttgc ccgcgcgagt ccggtttcca
      241 atattctgcg cctcttcttc accgcagtgg agggtatcat ggccaagaaa gcgcaagcga
      301 ttcccagggg gtatcacacc gtcaccccga gcctggtggt cgccggagcg gcaaaggcac
      361 tcgagttcta caagaaggcg ttcggcgccg aggagcggtc acgattcccc ggtcccgatg
      421 gctcgatcat gcacgcggag attctgatcg gcgactcggt agtcatgctc gccgatgaga
      481 tgccggagca gggcggtcga ggcccgaagt cgatcggcgg cacgccggta agcttctttg
      541 tctatcggga aaacgtggac gccgagtgga agcgtgcggt ggacgcgggg gccaaagaga
      601 tcatgccgct ggccgaccag ttctggggcg accgtaccgg gtgcctggag gatccgttcg
      661 ggcatcactg gtggctcgcg caacacatcg aagatctgac gccggacgag atgcagaaga
      721 gaggagaggc gttcttctcc cagatgcagc acgcatcgta gtcccgcgtt ccatccccaa
      781 ggatcacagg gcgagcccac ccagaatggt gggctcgctc actagtaccc cttgacgctt
      841 tatcgcctct cccagcgtag tgattccata gttgtcctgg atccaacaga accgaggtag
      901 gtcaccgggg gtccgatgtc cctggtcatt tcagccgttc tcgcccttac cctggcggcg
      961 ccacacgcct tacaacccca gacggagaac tccgagccgg acactacaat agatgcagcc
     1021 accagaggcc gggtgattca gggcg
//
LOCUS       DASRPQ010000515         3499 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1626741, whole genome shotgun sequence.
ACCESSION   DASRPQ010000515 DASRPQ010000000
VERSION     DASRPQ010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3499
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1626741"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1180)
                     /gene="treZ"
                     /locus_tag="VFD73_06100"
     CDS             complement(<1..1180)
                     /gene="treZ"
                     /locus_tag="VFD73_06100"
                     /inference="COORDINATES: protein motif:HMM:TIGR02402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose trehalohydrolase"
                     /protein_id="HZI73589.1"
                     /translation="MVLPDGGVRFSVWAPKAKEVSVLLQGGCERTELLEPRGSGVFSS
                     VLAGVPVGTDYAYRLDQGRSRPDPVSRYRPLGVHGPSRIVDPELFRWSDQGWTGVPAA
                     ELVIYELHIGTFTSVGTFDSAISQLPRVAELGVTAIEIMPVAEFPGGRNWGYDGVSLY
                     APQSTYGGPDGLRRLVDACHRTGLGVILDVVYNHIGPEGNYLPEFGPYFSDRHSTAWG
                     DGWNLDGPDSVEVRRYLLDNALYWIMEYHIDGFRLDAADQIIDQSATHLLKELVLLVK
                     GQADALGRHIALIAESDANDPRFIERIGGGGYGLDAQWSDDFHHAVHARLTGERQGTL
                     QDFGGVQPIAKALRDRFVNDGRYSRYRQRRYGRPAGHLPSNRFVVFVQNHDQVGNRAG
                     G"
     gene            complement(1249..1473)
                     /locus_tag="VFD73_06105"
     CDS             complement(1249..1473)
                     /locus_tag="VFD73_06105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73590.1"
                     /translation="MAAEARREVFVLVAVVVAVDLFFVALFFVARLRTASEAVKLGFT
                     AIWTLATLGAVLRGLTRVRRARLTSSASRL"
     gene            complement(1474..2028)
                     /locus_tag="VFD73_06110"
     CDS             complement(1474..2028)
                     /locus_tag="VFD73_06110"
                     /inference="COORDINATES: protein motif:HMM:NF019241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI73591.1"
                     /translation="MARSSSTEPARDLSSALRTLFERELAAVRREVDAYARDDQLWQS
                     VPGMSNVGGTLVLHLAGNLQHFLGTRLGRTGYVRNRDAEFSRRNVSRPELIAEIDAAG
                     EAIKAGLAALTDAQLVDDYPELIADRTVTIGQYLMHLSTHLAFHLGQIDYHRRVVTGS
                     NQGVGAVRTSELSSARPIARARSV"
     gene            complement(2029..2514)
                     /locus_tag="VFD73_06115"
     CDS             complement(2029..2514)
                     /locus_tag="VFD73_06115"
                     /inference="COORDINATES: protein motif:HMM:NF014373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HZI73592.1"
                     /translation="MSPFDPLDPQTPAFWLRLGTAILCGGIIGLERQLRGKAAGIRTS
                     ILICLGTQLFVSLGASFSGDRVDPTRVLGQVVSGIGFVGGGVILARDGAIIGVTSAAV
                     IWVLAALGSMIGLGHLVASIVLTVVTVGLLIGVELLESMFARLRAGVAERELERIELE
                     D"
     gene            complement(2549..2803)
                     /locus_tag="VFD73_06120"
     CDS             complement(2549..2803)
                     /locus_tag="VFD73_06120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73593.1"
                     /translation="MHEVTLDFRGKRITATLNRGETESGTQLPRTEPPMWYVTIAGTA
                     LTKIPAEPDDSEAAVRGRVLTWLQEHPDLLDRDQIVLGGG"
     gene            complement(2848..>3499)
                     /locus_tag="VFD73_06125"
     CDS             complement(2848..>3499)
                     /locus_tag="VFD73_06125"
                     /inference="COORDINATES: protein motif:HMM:NF025380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HZI73594.1"
                     /translation="TSAMAQPRRRPPAATIVFILLLLGGALALITTAIRHLVPATRAL
                     ADAHGQTTVTQGVVVEQMRAVSKLVSSETTVRDVVVYQNRRLGSTKRSLVVVTGKVLA
                     GIDLDKGSQVHIDNTAHRVDIVLPPAQVVAVEVTQLRTYDERSGLWNPFRPEDRDTIY
                     DLARSQLVSAAGELGVTSHAEESARRLLSAMIHPEGYTVDVRFARLGPVTRSPAQD"
BASE COUNT          691 a         1135 c         1083 g          590 t
ORIGIN      
        1 cgccacctgc ccggtttcct acctggtcat gattctgaac gaagaccacg aaccggttgc
       61 tgggcaggtg accagccggc cggccgtagc gccgctgtcg atagcgagaa tatctcccat
      121 cgttcacgaa gcgatccctc agcgccttgg cgattggctg aactccgccg aaatcctgca
      181 acgttccctg ccgctctccg gtcaatctcg cgtggacggc atggtggaaa tcatcgctcc
      241 attgggcatc caggccgtat cctccgccac cgatcctttc gatgaatcga gggtcgttcg
      301 catcgctctc ggcgatgaga gcgatgtgcc ggcccagcgc atcggcttgc cctttcacca
      361 gcaggacaag ctccttcagg agatgcgtcg cactctgatc gatgatctga tcggcggcgt
      421 ccagccgaaa tccgtcgatg tgatactcca tgatccagta cagtgcgtta tccaggagat
      481 agcgtctgac ctcgacactg tcgggcccat ccaggttcca cccgtcaccc cacgctgtgc
      541 tgtgccggtc ggagaagtac ggtccaaact ccggcaggta attgccctcc ggaccgatgt
      601 gattgtagac cacatcgaga atgacgccga gtccggttcg gtggcatgcg tcgaccagcc
      661 ggcgaaggcc atcgggccca ccataggtgc tctggggcgc gtacagggaa accccatcgt
      721 atccccaatt ccgcccgccc gggaattccg cgacaggcat aatctcgatg gctgttacac
      781 ccagctccgc tactcgcggg agttggctga tcgccgagtc gaacgtgccc acggatgtaa
      841 aggtgccaat gtgaagttcg tagatcacga gctccgccgc gggcacgccc gtccaaccct
      901 gatcggacca gcggaacaat tcgggatcca cgattctgga gggaccgtgc acccccaggg
      961 gacgatagcg gctcaccggg tcgggccgag agcgaccttg gtccagtcgg tacgcgtaat
     1021 ccgtcccgac cgggacccca gcaagcacgc tgctgaacac gccagaccca cggggctcga
     1081 ggagctcagt ccgctcgcag ccgccttgca gcaagaccga tacctccttc gcctttggag
     1141 cccacacgct gaaccgcacc ccgccgtcag ggagcaccat agcaccccgg gagaggcgcc
     1201 acaggctccc tgaatccagt gaagtgctgc tccgggctga cggatcgatc agaggcgcga
     1261 ggctgaggag gtaaggcgag cccgccgaac ccgcgtcagt cctcggagga cagcgcccaa
     1321 ggtggcgaga gtccagatag cggtgaagcc gagcttcacc gcttcagaag cggtcctgag
     1381 cctggcaacg aaaaagaggg ctacgaagaa cagatcgacg gcgacgacca cggcaaccag
     1441 cacgaacact tcgcgacgag cttccgcagc cactcagacg ctccgagccc gggcgattgg
     1501 acgggcggag ctcagctcgc tggtgcggac tgctcccacg ccttgattcg atccggtaac
     1561 cacacggcgg tggtagtcga tctggcccag atggaaggcg aggtgagtgc tcagatgcat
     1621 caggtactgg ccgatggtta cggtgcgatc agcgatgagt tccggatagt catcgaccag
     1681 ctgagcgtcc gtcagggcag cgagtcctgc tttgatcgcc tcgcccgcgg cgtcgatctc
     1741 tgcaatcagc tccggccgag aaacgtttcg ccgggaaaac tcggcgtcac ggtttcgcac
     1801 atatcccgtc cggcccaggc gggtgcccag gaaatgctgc aggttaccgg caagatgcag
     1861 aaccagcgtc ccgccaacgt tggacatgcc gggaacactc tgccacagct ggtcgtcacg
     1921 agcgtacgcg tcgacttcgc ggcggactgc ggcaagctcg cgctcaaaga gagtgcgaag
     1981 tgcgctactg aggtcacggg cgggctccgt gctgctcgac cgagccactc agtcctccag
     2041 ctcgatccgc tcgagctccc gctcggcgac cccggcgcgc aagcgggcga acatcgattc
     2101 cagtaactct accccaatga gcagaccaac ggtcaccacg gtcaggacga tcgacgcgac
     2161 gagatgcccg agaccgatca tcgatcccaa cgcggcgaga acccaaatta ccgcggcgga
     2221 agtcactccg ataatggctc cgtcgcgagc caggatgaca ccgccaccga cgaacccgat
     2281 ccccgagacc acctgcccaa gcacccgggt tggatctacc cgatcaccgc tgaacgatgc
     2341 gcccagtgag acaaagagct gggttcccag acaaatgaga atactggtgc ggatgcctgc
     2401 ggctttcccc cgaagctgac gctcgagccc gatgatgcca ccacagagga tggcggtccc
     2461 caggcgaagc cagaatgccg gtgtttgggg atcgagcgga tcgaaggggc tcacattgac
     2521 tcccagtcga agagggggaa tccagacgtt agccgccgcc gagaacgatc tggtcgcgat
     2581 cgagcaggtc cgggtgctct tgcaaccagg tcagcacccg gccgcgcacc gccgcttcgc
     2641 tgtcgtccgg ctcggccgga attttggtga gcgccgtgcc tgcaatcgtc acgtaccaca
     2701 tgggaggttc ggtcctggga agctgcgtgc cactctcggt ctcgccgcga ttcagcgtgg
     2761 ccgtgattcg ttttccccgg aaatcgagcg tcacctcgtg catacccgat caatctagcg
     2821 ctcccgacac gaaatcaccc ctctcactca gtcctgtgcc ggcgagcgcg tgacgggccc
     2881 caggcgggca aaccggacgt ccacggtata gccctccggg tgaatcatcg cactcagcag
     2941 ccggcgggca ctctcctcag cgtgggaggt cacccccagc tctccggcgg cactgacgag
     3001 ttgggaacgg gcaagatcgt aaatagtatc gcggtcctcg ggccggaatg ggttccaaag
     3061 cccgctgcgc tcgtcgtagg ttcgtaattg ggtgacttct accgctacga cctgggccgg
     3121 cgggaggacg atgtccaccc ggtgggccgt gttgtcgatg tgaacttggc tgcccttatc
     3181 cagatcgatc ccggcgagca ccttgccagt caccacgacg agggaacgct tggtggatcc
     3241 gagccgccgg ttctggtaga ccaccacgtc ccgtaccgtg gtttcgctgg agacgagctt
     3301 ggatacggcg cgcatctgct cgaccaccac gccttgggtg acggtcgttt gaccgtgggc
     3361 atcggcaagg gcacgggtgg cagggaccag gtgccggatg gcagtcgtaa tgagcgcgag
     3421 cgcgccgccc aggagaagga gaatgaagac gattgtcgcg gctggaggcc ggcgccgggg
     3481 ctgggccata gcggacgtc
//
LOCUS       DASRPQ010000516         3755 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_375963, whole genome shotgun sequence.
ACCESSION   DASRPQ010000516 DASRPQ010000000
VERSION     DASRPQ010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3755
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375963"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1118
                     /locus_tag="VFD73_06130"
     CDS             <1..1118
                     /locus_tag="VFD73_06130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73595.1"
                     /translation="GFNIMAQIEGAVNDGTSGDPAVGSDLINHLLLCMYSPSSEATSY
                     PETFPENFTVSLTQTSSAHGAFGERSGTSVSPVLSRPLSAPYTGVAPPTSSTKWGDLI
                     TNNPHRVVYYGRPDLTDDTKLRYEWKSIPRGVNLGSSYVIVGFCLDAATQTTTMIVEQ
                     STGGTAVQAYADAYFLTPSVAGTCSPNLAVLAGTSPFQLAHRLFHYGVDLLSPSPLMA
                     AVLTTGVGSKTKCCSVFGPTNVGSVDLAVAPSNTNGTPSVPTTIKVNTQKFRLTVTSK
                     SGSTPVNGVKITLTTGTNNGTPTTIRKAASQTADCKTAPPAVGVTGQDGNAAGTYDFP
                     FLCITSTGGVFVTITADVDGRSDQPVSLTSNKAKVIP"
     gene            complement(1199..1771)
                     /locus_tag="VFD73_06135"
     CDS             complement(1199..1771)
                     /locus_tag="VFD73_06135"
                     /inference="COORDINATES: protein motif:HMM:NF019307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase dimerization domain-containing
                     protein"
                     /protein_id="HZI73596.1"
                     /translation="MMVELLSQGDQRHAAYASPNGDFANAVTRLAGDLLKLDTLFDSR
                     THPLLGHARATPTMLEAGVSRNVTPPVARAVLDVRSTPDWTHEELAEELRRALSSDVI
                     VTSRRMVPCETPARSRLLETASRLRPEAKHYGSPTCSDWVFLRLYDAFKCGPGQSRRS
                     HTADEYVDIPEVSAARGFYADLTRAYFGGR"
     gene            complement(1707..2255)
                     /locus_tag="VFD73_06140"
     CDS             complement(1707..2255)
                     /locus_tag="VFD73_06140"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HZI73597.1"
                     /translation="MELLCDLVAIPSVSGQEADIAVFIESTAKRWGLNVARDSNGVRI
                     EVTGWGVGPTLVLASHLDVVPPGSGWTRDPFVPVIEGNRLYGRGSGDAKASVAAMLYA
                     AKDLVDSGGMDAGRLLLLFGLGEETENTTMEAALEGERNRCRSHWRAHRSRLCDCPAR
                     ADDGRAAEPGRSASRRLCIPER"
     gene            complement(2292..3272)
                     /locus_tag="VFD73_06145"
     CDS             complement(2292..3272)
                     /locus_tag="VFD73_06145"
                     /inference="COORDINATES: protein motif:HMM:NF012412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73598.1"
                     /translation="MKKRDLLALEEWSPEEYDRLLSLVARVKRGEIAGGLSGKVLAQV
                     FLQRDPRTQASVDIAMYVHGGHATALDLSSGGAEHVIDLARSLASWADGVAVRSGPGP
                     GAWRDARSDMLLRNVTAGCEKPVLNLGSARRNPCQALADSLTLQERLGHAEGKRFVLA
                     WSWDTEALATAVPASAALAAARLGMEIVIARPEGYELDPEDTGLIRKTAQQHGGEFVH
                     ISDDLDDALVGADVVYVASWGSVKLYDQPEEEARLRDQQRDWGLTRARHRGTRGGKGV
                     VMHAGPVRRNVAIADQVLDGTDSAVLEQSQNLFHAHRALLLELLNPGVDG"
     gene            complement(3276..>3755)
                     /locus_tag="VFD73_06150"
     CDS             complement(3276..>3755)
                     /locus_tag="VFD73_06150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73599.1"
                     /translation="PYGIVAGSDHFIWIALLGTNKLGRVNPADGSIREFVLPADGARP
                     RRLQVGADGTVWYTDYARGYLGALDPRTGRVREWRSPSPNAGPYGIAIGTDGRIWYCE
                     SRTNQMVAFDPKTEKMETVKIPTAPAIVRNMETDSTRHRLWLALSGTGRLGKIELEH"
BASE COUNT          742 a         1236 c         1078 g          699 t
ORIGIN      
        1 ccggattcaa tatcatggcc cagatcgagg gggccgtgaa cgatggcacg tccggagatc
       61 cggccgtggg gtcggatctc atcaaccacc ttctgctctg catgtacagt ccgagctcgg
      121 aggcgacgag ttacccagag acctttccgg agaacttcac cgtctcattg acgcagacct
      181 cgtcggccca cggggcgttc ggtgagcggt caggtacttc ggtatctccg gtcttgtcac
      241 ggcccctctc ggccccatat accggagtcg caccgccaac cagttcaacg aaatggggag
      301 atctgataac gaacaatccg caccgtgtgg tgtactacgg gcgcccggat ctcacagacg
      361 atacgaaact gagatatgag tggaaaagca tcccccgcgg cgtcaatctc ggttcatcgt
      421 atgtcatagt aggattttgt ctggacgcgg ctacccagac aaccactatg attgtcgagc
      481 aatcgactgg gggcacagcg gttcaggcgt atgcggatgc gtatttcttg accccatcgg
      541 tagcggggac ctgctctccc aacctcgcgg tactcgccgg aacaagccca ttccaactgg
      601 cccatcgcct gtttcattac ggcgtggatc tcctcagtcc cagcccgctc atggcggcgg
      661 tattgacgac cggcgtaggc tctaaaacaa agtgctgcag tgtgtttggt cccacgaacg
      721 tagggagcgt cgatctggcg gttgcgccgt ccaacaccaa tggcacgcct tccgttccga
      781 cgacgatcaa ggtaaacacg cagaaattcc gtctaaccgt caccagcaag tccgggagca
      841 ctccggtaaa cggcgtcaag atcacgctca ccaccgggac caataacggc acaccgacga
      901 ccattcgtaa ggccgccagt cagacagctg actgcaagac tgcccctccg gctgtaggcg
      961 tcaccggcca agacggcaac gcggcaggaa cctatgactt cccattcctg tgcattacca
     1021 gcaccggtgg agtgttcgtc accattacgg cagatgtcga cggcaggagt gatcaaccgg
     1081 tatcgttgac ttcgaataag gccaaggtca taccgtaatc agcgaccaca gtctaatgaa
     1141 aatgagggcg gccgaattcg ccgccctcat ttcttagaga ccagtactgc ttaggaggtc
     1201 agcggcctcc aaaatacgcc cgcgtcagat ccgcgtagaa ccctcgagcc gcactgacct
     1261 cgggaatatc gacatattcg tcagcggtat gtgacctcct gctctgccct ggcccgcact
     1321 tgaaggcgtc gtacagccgc aagaacaccc agtcggagca ggtgggactg ccgtagtgtt
     1381 tcgcctcggg ccgcagccgt gatgcggttt ccagcagtcg tgaacgggcc ggcgtttcgc
     1441 aggggaccat tcggcgggat gttacgatga catcgctgct gagtgcacgc ctcagctcct
     1501 cggccagctc ctcgtgcgtc cagtccggcg tactccgcac atcgagcacg gcccgcgcaa
     1561 cgggaggcgt gacgtttcgg ctcacccccg cttccagcat tgtgggggtg gcacgggcgt
     1621 gacccaggag tgggtgagtg cgggaatcga acaaggtgtc cagcttgagc aggtcgccgg
     1681 caaggcgggt taccgcgttg gcaaaatcac cgttcgggga tgcataggcg gcgtgacgct
     1741 gatctccctg gctcagcagc tctaccatca tcagcccgcg ctgggcaatc gcaaagtcga
     1801 gaccggtggg ctcgccaatg actgcggcat cgatttcttt ctccctccaa tgccgcttcc
     1861 atcgtggtgt tctcggtctc ttcacccagg ccgaagagaa gcagcaaccg cccggcatcc
     1921 atgccgccac tgtccaccag gtcctttgcc gcgtagagca ttgccgccac cgaagccttg
     1981 gcgtctcccg atccgcggcc gtagagccga ttcccctcga tgactggaac gaacggatcg
     2041 cgggtccagc ccgagcccgg tggaacgaca tcgagatgcg acgccagtac cagggtcggc
     2101 ccgactcccc agccggtgac ctcgatgcgg acgccgttac tgtcgcgggc tacattcagg
     2161 ccccagcgtt tcgccgtcga ctcgatgaag acggcgatgt ccgcttcctg accactgacg
     2221 gaagggatag cgaccagatc gcagagcagc tccacttcac gcggcagagc acacccgccg
     2281 agatcccgcg atcacccgtc tactccaggg ttcagcagct ccaggagcaa cgcccgatgg
     2341 gcatgaaaca gattctggct ctgttccagc accgccgagt cggtaccgtc gagaacctga
     2401 tcggcgatcg cgacatttcg ccggaccgga ccagcatgca ttaccactcc cttgccccca
     2461 cgcgtgcccc gatggcgagc tcgagtaagt ccccaatcac gctgctggtc ccgtagacgc
     2521 gcctcctcct caggctggtc gtacagcttg accgatcccc aggacgcgac gtacaccaca
     2581 tccgctccaa ccagagcgtc gtccaggtcg tcgctgatat gcacgaactc gccaccgtgc
     2641 tgctgagcgg tctttcgaat cagtccggta tcctccgggt cgagctcata cccttccggc
     2701 cgggcgatta cgatctccat gccgaggcgg gcggcagcca gcgctgcact ggcaggaacg
     2761 gccgtggcta gtgcctccgt gtcccagctc caggcgagca cgaacctctt cccctcggca
     2821 tggccgagcc gctcttgcaa ggtcaacgaa tccgctaacg cctgacatgg atttcgtctg
     2881 gccgagccca ggttcaggac cggcttctca cagccggcag tgacgttcct gaggagcatg
     2941 tcactgcggg catcgcgcca agcgccgggg cccggaccgg agcgcaccgc cactccatcg
     3001 gcccagctgg ccagcgacct cgccagatcg atgacgtgtt ccgccccacc gctgctcaag
     3061 tccagggcgg tggcgtgtcc cccgtggacg tacatggcga tatcgacact cgcctgggtt
     3121 cgcggatccc gctgcaggaa aacctgcgcg agcaccttgc cgctcaggcc accggcgatc
     3181 tccccccgct tgactcgagc gaccagtgaa aggagccggt catattcttc cggactccac
     3241 tcttccaacg cgaggagatc acgtttcttc acgattcagt gctcgagctc gatttttccg
     3301 aggcggccgg ttccgctcaa ggcgagccag agccgatgcc gagtgctgtc ggtctccata
     3361 ttgcgcacga tggccggtgc cgtcggaatc ttcaccgttt ccatcttttc agtcttggga
     3421 tcaaaggcca ccatctggtt ggtgcgcgat tcgcaatacc agatgcgacc atcggttccg
     3481 atcgcgatgc cataggggcc ggcattagga gagggagatc gccactcgcg aacccgccca
     3541 gttcggggat ccagggcacc cagatagcct ctggcataat ccgtatacca caccgtgcca
     3601 tcggccccaa cctgaagccg gcgcgggcga gcgccatcgg ccggcagcac gaattccctg
     3661 atcgatccat cggcgggatt gacgcgcccg agcttgttcg tgcccagaag tgcaatccag
     3721 atgaagtggt cggaacctgc aacaatccca taagg
//
LOCUS       DASRPQ010000517         1070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1948735, whole genome shotgun sequence.
ACCESSION   DASRPQ010000517 DASRPQ010000000
VERSION     DASRPQ010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1948735"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            480..824
                     /locus_tag="VFD73_06155"
     CDS             480..824
                     /locus_tag="VFD73_06155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73600.1"
                     /translation="MTQHTSLSPERWAAFSLDQQVLMIGNEMNRAARWMRPEDRASLN
                     LAYERILRLVDLTVEVQGRPALRRELLRWRDLIAELYIRPEADSAAHAAAFRALLLFT
                     PVAAQQIPYVLS"
     gene            844..>1070
                     /locus_tag="VFD73_06160"
     CDS             844..>1070
                     /locus_tag="VFD73_06160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73601.1"
                     /translation="MNHPTPIRPDEHAVYDPQRMGKTTLFQSDRLLVGLNAFEPGQEH
                     RLHAHSGMDKVYHVLAGRGVFLLEGREEPMAA"
BASE COUNT          188 a          364 c          326 g          192 t
ORIGIN      
        1 gcaagcgacg ctccgaagtc tggaagcgaa ggtgcttggg taggttcggt taaggtctgg
       61 cgcgaaataa cctacgcaaa ctgagcttcc accggcccaa cgggtcggga gagccgagcc
      121 cagggcttcg gccgcaggcc gatgccctgg gaagaaaagg caattcttct ccgcggcctg
      181 aagggccgcg agagtttctg ccggaggtca actcaattcc agactcaggg atctcgcggc
      241 ccttcaggcc gcagagctgc ggggactgtt cacccagggc atcggcctgc ggccgaagcc
      301 ctgggctccg ttctcccggc ccgttgggcc ggatgggatt cctggtagca tctgtacagg
      361 agagtctcgc atgtctcatc cccggttttc gcaatggctc ggcgtcggcc ttcaagcgcc
      421 cgagaacccg aaaccttgct tccactcgga cgagtatctc tggagcagca cacatcccca
      481 tgacccaaca tacctctctt tcgccggagc gctgggcggc cttcagtctc gaccagcagg
      541 tgctcatgat cggcaacgaa atgaaccggg ctgcccgctg gatgcgtccc gaggatcggg
      601 cgagcctgaa tctcgcctat gagcgcatcc tgcggctggt cgatctcacg gtcgaagtcc
      661 agggacgtcc ggctctccgg cgggagctcc ttcggtggcg ggacctcatc gcagagctct
      721 acatccgccc ggaagcggat tccgccgctc acgccgccgc tttccgggct cttctgctct
      781 tcactccggt cgcggcgcag cagatcccct acgtgttgag ctgacgcgat ccgagatcac
      841 tccatgaacc atccaacccc gatccgcccc gacgagcacg ccgtctacga ccctcagaga
      901 atggggaaga ccacgctttt ccagtccgac cggctcctcg tggggctcaa cgccttcgag
      961 ccgggccagg agcatcgcct gcacgcccat tccgggatgg acaaggtcta ccacgtgctc
     1021 gcgggccgcg gcgtcttcct cctcgaaggc cgcgaggagc cgatggcggc
//
LOCUS       DASRPQ010000518         5592 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1948877, whole genome shotgun sequence.
ACCESSION   DASRPQ010000518 DASRPQ010000000
VERSION     DASRPQ010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5592
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1948877"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..938
                     /locus_tag="VFD73_06165"
     CDS             <1..938
                     /locus_tag="VFD73_06165"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HZI73602.1"
                     /translation="NSFFINNGTDAIEGAIKLTRLYTRRGTFISTLGGFHGKSMGSLS
                     LMGKASFREPFQSGLQDVRFVPYGDADALEAEFRRCEMVGVQIAGVVLEPVQGEAGGV
                     VPPDDYFPRARELCTRYGALLIADEIQTGMGRTGKLWGVDHWNVVPDILCVGKSIGGG
                     VMPLSAFISTASIWEVMIPNPIIHSTTFGGNPLACAAGLAAIQVTLEEDLPGQAAVKG
                     DFLLRELGSLQERYPQILSQVHGKGLLIGMEFPAPEVGWKAASGLFRRGVLVAGTYSK
                     AQVIRIEPALGIPKDLLEEMLNRLEDTFGSIARTL"
     gene            complement(960..1835)
                     /locus_tag="VFD73_06170"
     CDS             complement(960..1835)
                     /locus_tag="VFD73_06170"
                     /inference="COORDINATES: protein motif:HMM:NF021230.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TorF family putative porin"
                     /protein_id="HZI73603.1"
                     /translation="MQQTIVGASLVLLTGALAAPARAQTEFGVDLGLFSAYVFRGLSY
                     TNKPVAQPAVYLSIPVGNASVTVGGWSNIDIGKYDDPNDDLSESGGTSSFNFAELDPY
                     GEVSVPVGKATLTGGVLGYIYPNTTPNGVAGLTTEFNTVELYGKAAVDLPLSPQLSLY
                     YDIDKIKGAYLEASISHSLQAGENVSVDLGALAGFSAGQDANLDAAGNPRAKFFNFVD
                     NGLTHLDLSAGVSFSAAALSFAPALHFVINSDAATKVTSPSHLDKDVKLWGGVTISWS
                     KALGPEPEPTEADKP"
     gene            1944..2111
                     /locus_tag="VFD73_06175"
     CDS             1944..2111
                     /locus_tag="VFD73_06175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73604.1"
                     /translation="MSWLGVLLATIGASLILGALTFVSALIGALITAMIVLMCGPLID
                     RVIARRNRGSV"
     gene            complement(2108..2482)
                     /locus_tag="VFD73_06180"
     CDS             complement(2108..2482)
                     /locus_tag="VFD73_06180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73605.1"
                     /translation="MPPKLSSRQQAQLAFLERLPPKLSRMHNIVEQMGSLRVDETILR
                     NFGRLLDEIKGNASALSLNGLADTAGLMGTMLRRGGGLQFRVRGLRELLGSLKTNYEA
                     ALRAATTPEETAGEQGEEKPGA"
     gene            2651..>5592
                     /locus_tag="VFD73_06185"
     CDS             2651..>5592
                     /locus_tag="VFD73_06185"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HZI73606.1"
                     /translation="MKISDLSIRRPVLASMLSLALVLFGAIGYTQLAVREFPDVDPPI
                     VSVSTALPGANPQVVESAVTDILEEELSTVEGLRTLTSSSQEGFSNITLEFNLDRNVD
                     AAAQDTRDKVARVRERLPEDVEEPVVAKEDADAQPFFWLALSGENYDLLQLSDIGDRL
                     VKSRLQSLPGVGQARIFGERRFSMRVWLSASELAARGLTVQDVQQAIKSRNVEVPAGR
                     IESERREFTVRSLGELKTPEEFGNLVVSNTNGVLVKLKDLARVELGAEDDRSALRFKG
                     TPAVAIGVIRQSKANILTVADAIRAELPRIQASLPPGVAIAVAFDQSIFVKRSIQEAE
                     ETLGIAALLVVIIIFLFLRNLRATIIPGLAIPTSIVAAFAIMYFLGFSINNFTLLALT
                     LAIGIVVDDAIIVLENAYRHQEELGETPDQAATNGTREIAFAVLATTISLVAVFTPLA
                     FLKGSTGRLFNEFGIAVAGAVIISGFVALTLTPMLCAKILRVPPRHGRLYGILEDAFN
                     RLASGYARSLALALRYRLAVIGVAALVTVGAVVVFRALKREFVPPEDRGWFFSFIIAP
                     EGSSLAYTDSYQRQAEAIQAKTKGIDSYFSVVNIGDGVSRGMIFTNLEDWSKRSRSVQ
                     DIIGEVQAQYFGIPGVLAFANNPPAFGWGSPVNFVIQHPDFDMLAKGNDTLLARARQI
                     KGLLNVDSDLRVNKPQLTVSFDRDRAEDLGVPVSEVATTLQVLLGGNKTSTFTRANKQ
                     YDVIVQLDPRARATPSDMTGLYVRGRSGDLVKLEALANVQEGVGPRELNHFDRVRSAT
                     LTASLAPGFTLGEALDSLNRIAAEVLPKGSSTALSGESRELEESGSALYFAFLLALVV
                     VFMVLASQFESLVHPFTVLLAVPLAVTGALFTLKLAGSTLNVYSQIGMILLIGLVSKN
                     SILLVEYINQLKDRGMTALAAAQEAGRIRLRPILMTSVATVMGALPIALGLGAGSLSR
                     RPLGYAIVG"
BASE COUNT         1000 a         1695 c         1746 g         1151 t
ORIGIN      
        1 agaactcctt cttcatcaat aacggcaccg acgcaatcga aggcgccatc aagctgaccc
       61 ggctctacac ccgccgcggc acctttatct ccacgctggg cggtttccac ggcaaatcga
      121 tgggatcact gtcgctgatg ggaaaggcat cgtttcggga gccgtttcag tccgggctcc
      181 aggacgtacg ctttgtgccc tatggtgatg ccgacgcact ggaggcggag tttcgccgtt
      241 gtgagatggt gggggtacaa attgctgggg tcgttctgga accggttcag ggagaggccg
      301 gcggggtggt gcctccggac gattacttcc cgcgcgcccg cgagctgtgc accaggtacg
      361 gggcgctgct catcgccgat gaaatccaga ctggcatggg aaggaccggg aagctttggg
      421 gcgtggacca ctggaatgtg gttcccgata tcctttgcgt tgggaagtcg atcggcggcg
      481 gtgtcatgcc gctgtccgcc ttcatctcga cggcaagtat ctgggaggtg atgatcccga
      541 atcccatcat tcattccaca acttttggcg gcaaccctct ggcctgtgcc gccggtctcg
      601 cggccattca ggtcacgctc gaggaagacc tgccggggca ggcggcggtc aaaggcgatt
      661 ttctgctcag ggagctgggc tccctccagg agcgctatcc gcagatccta agccaagtac
      721 atggaaaggg cctcctgatc ggaatggagt ttcccgctcc cgaggtcggt tggaaagctg
      781 catccggact gttcagacgc ggcgtccttg tggcgggtac ctattccaag gcgcaagtca
      841 tccggatcga gccggcgttg gggataccaa aagatctact ggaggagatg ttgaaccgct
      901 tggaagacac ctttggctcg atagcgcgta ccctctagtc ttcgactccc cgatgccttt
      961 caaggcttgt ccgcttcggt gggctccggt tcggggccca gcgccttgga ccagctgata
     1021 gtgactccac cccagagctt cacatccttg tccaggtggg atggtgacgt cacctttgtc
     1081 gctgcatccg agttgatcac gaagtgcaac gcgggagcga acgacagagc cgctgccgag
     1141 aatgaaacac cggcggaaag gtccaggtgg gttaatccgt tgtcgacgaa gttgaagaac
     1201 tttgcccgag gatttcccgc agcgtcgagg ttggcgtcct gcccggcgct gaacccggca
     1261 agtgcaccga ggtccaccga gacattctcg ccggcctgca aggagtggct gatgctggct
     1321 tcgaggtagg cgcccttgat cttgtctata tcgtagtaga gcgagagctg cggactcagc
     1381 ggcaggtcca ccgcagcctt gccgtacagc tccacggtgt tgaactcggt ggtcagcccg
     1441 gccacgccat ttggggtggt gttggggtag atgtagccca agacgccacc cgtgagcgtc
     1501 gcttttccaa ccggaacact cacctcgcca taggggtcga gctcagcgaa gttgaagctc
     1561 gaggtgccgc cgctttcact caaatcgtca ttcggatcgt cgtacttacc gatatcgata
     1621 ttggaccaac ctcccaccgt gacggaagcg ttgccaaccg gtatcgagag atagaccgca
     1681 ggctgggcaa ccggcttatt ggtatagctc aacccccgaa acacatacgc gctgaagagg
     1741 cctaggtcca ctccgaattc ggtttgcgcc cgtgccgggg cggcgagggc accggtgagc
     1801 agaaccaggg acgctccgac gatggtttgc tgcatgctgt ctcctgaggc tacggtgccg
     1861 gttgcgggga aaggaggagt tccgctaacc tttggtcgtt gcagcccgat cgttgcagcc
     1921 cgatccctca tccggagaag agtatgtcct ggctcggtgt tctgttggct acgattggcg
     1981 cttcgctgat cctgggtgcg ctgaccttcg tatcggcgct gatcggggcg ctgattaccg
     2041 ccatgatcgt tctgatgtgc ggcccgctca tcgatcgggt gattgcgcga cggaaccgag
     2101 gctccgtcta agcgccgggt ttctcctcgc cttgctcgcc ggccgtttcc tccggtgtgg
     2161 tagccgcccg gagtgctgcc tcgtagttgg ttttgaggct ccccagcaac tctcgcaggc
     2221 ctcgcacccg aaactgtagg ccaccacccc gccgaagcat cgtccccatc aaccctgcgg
     2281 tatcggctaa gccgttcagg ctgagtgcgc tagcattgcc tttgatctcg tccagcagcc
     2341 gtccgaaatt ccgcaaaatc gtctcatcca ctcggagact tcccatctgt tcgacgatgt
     2401 tgtgcatccg tgagagtttg ggaggcaacc gctccagaaa cgcgagctgg gcctgctgtc
     2461 ggctggagag ttttggcggc atcgctgatc caggtgtgtt ctcctaatgt aattgcccag
     2521 gcctgcctgc cctacttcct gctctgaatc ctggatcgag ttcctccgta gtggagaggc
     2581 ttcttgaccg ggtgtcgatt ttcgccatcc cccaaccgac cactggaacc gaggacctgg
     2641 gaccggcctc atgaaaattt cggacctctc tatccgtcgt ccggtgctgg ccagcatgct
     2701 cagcctggca ctggtgctct ttggggccat cgggtacacc cagctggcag ttcgggagtt
     2761 ccccgatgtc gatcctccca tcgtctcggt aagtaccgca ctgccgggcg ccaacccgca
     2821 ggtggtcgaa tccgccgtga ccgacattct ggaggaggag ctcagcacgg tcgaggggct
     2881 tcggaccctg accagctcga gtcaggaggg gttcagcaat atcaccctgg aattcaacct
     2941 cgatcgcaac gtagatgctg ccgctcagga cacccgcgac aaggtcgccc gggttcgaga
     3001 gcggctgccg gaggatgtgg aagaaccggt cgtagccaag gaggatgcgg atgcccagcc
     3061 gttcttctgg ctggcgctgt ccggcgagaa ctacgacctg ctccagctct ccgacatcgg
     3121 cgaccgactg gtcaagagcc ggttgcagag cctgcccggg gtgggtcagg ctcgaatctt
     3181 cggtgagcgg cggttctcca tgcgggtctg gctctccgcc tccgagctgg cggcgcgtgg
     3241 attgacggtg caggacgttc agcaggcgat caagagccgc aacgttgagg tgcccgctgg
     3301 gcggattgaa tcggagcggc gggagttcac ggtccgctca ctaggagagc tcaagactcc
     3361 ggaggaattc ggcaacctgg tcgtgagcaa taccaatggt gtgctggtca agctcaagga
     3421 cctggcaaga gtagagctcg gagccgagga cgaccgaagt gcgctgcgct tcaaaggaac
     3481 cccggctgtt gccatcggag tgatccgcca gtccaaggcg aacattctca ctgttgccga
     3541 tgccatcagg gccgagctgc cccggatcca ggcatcgctc ccgcccggag tcgccattgc
     3601 cgttgcgttc gaccagtcga tcttcgtcaa gcgatccatc caggaggcag aggagacgct
     3661 cgggatcgcc gcgctcctgg tggtgatcat catcttcctc ttcttgcgaa atctccgggc
     3721 aacgatcatc cccggcctgg ccattccgac atcgatcgtg gccgcgtttg cgatcatgta
     3781 cttcctgggc ttctccatca acaacttcac tctgctcgcg ttgacactgg ccatcggcat
     3841 cgtggtcgat gatgccatca tcgtgctgga gaatgcctac cggcatcagg aagagctggg
     3901 cgagacgccg gatcaggcgg ccaccaacgg aacccgggag atcgcctttg ccgtgctggc
     3961 aacgaccatc tcgctggtgg cagtgttcac accgctggca ttcctcaagg gttccaccgg
     4021 ccgactgttc aacgagttcg gtatagccgt ggccggcgcg gtgatcatct cggggttcgt
     4081 ggcgctcacc ctgacaccga tgctctgcgc caagatcctc cgggttcctc ctcggcatgg
     4141 acgtctgtac ggcattctgg aagacgcctt caatcggctg gcctccggat atgctcggtc
     4201 cctcgcgctg gccttgcgct accgattggc ggtcatcgga gtggcggccc tggtcacggt
     4261 cggggcggtg gtggtcttcc gcgcgctcaa acgcgagttc gtcccgccgg aggatcgggg
     4321 ctggttcttc tccttcatca ttgcgccgga aggatcatcg ctggcctata ccgacagcta
     4381 ccaacggcag gctgaggcca ttcaggccaa gacgaaggga atcgacagct atttcagcgt
     4441 ggtgaatatc ggcgatggcg tgagccgggg gatgatcttc accaatctgg aggactggtc
     4501 caagcggagt cgctcggtcc aggacatcat cggagaggtt caggcccagt acttcggcat
     4561 tcccggtgtg ctcgcctttg ccaataaccc gccggcgttt ggttggggca gcccggtgaa
     4621 tttcgtgatc cagcatcccg acttcgatat gctggccaag ggcaacgaca cgctgctcgc
     4681 ccgggctcgg cagatcaagg gactgctgaa cgtggatagc gatctgcggg tcaacaagcc
     4741 gcagctgaca gtcagcttcg accgagaccg ggcagaggat ttgggagtgc ccgtctccga
     4801 agtggccacc accctgcagg tcctgctggg tgggaacaag accagcacct tcacccgcgc
     4861 caacaaacag tacgatgtca tcgtgcagct ggatccccgg gcacgggcca ctcccagcga
     4921 catgactgga ctgtacgtcc gcggacgcag cggtgacctg gtcaagctgg aagcgctggc
     4981 caacgtgcag gaaggcgtgg gcccgcggga gctgaaccac ttcgatcgag tgcgctccgc
     5041 caccctgacc gccagtttgg cgccgggttt caccttggga gaagcgctcg actctctgaa
     5101 ccggatcgcc gcggaggtcc tgccgaaggg aagcagcacc gctctgtcgg gggaatcgcg
     5161 cgagctggaa gaaagcgggt ccgccctcta cttcgcattc ctgctcgcgc tcgtcgtggt
     5221 gttcatggtg ctcgcgagcc agttcgaatc gctggtgcat ccgtttaccg tgctgctcgc
     5281 ggtgcccttg gccgtgaccg gtgcgctgtt cactctcaag cttgctgggt ccacgctgaa
     5341 cgtgtacagc cagatcggca tgatcctgct gatcggactg gtctcgaaga actcgattct
     5401 gctggttgaa tacatcaacc aactgaaaga tcgcgggatg accgcgctgg cagcggccca
     5461 ggaagcgggc cgcatccggc ttcgccccat cctgatgaca tcggttgcca ccgtcatggg
     5521 ggcgctgccc atcgcactcg ggctcggcgc gggatcgctc agccgccgtc cattgggtta
     5581 tgcgattgtc gg
//
LOCUS       DASRPQ010000519         1395 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1948936, whole genome shotgun sequence.
ACCESSION   DASRPQ010000519 DASRPQ010000000
VERSION     DASRPQ010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1395
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1948936"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1395)
                     /locus_tag="VFD73_06190"
     CDS             complement(<1..>1395)
                     /locus_tag="VFD73_06190"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HZI73607.1"
                     /translation="QATVDLPAVLPAAVVDLRTEEGARLVQAQWRYSDVDIVTVNHHE
                     PGPDLRASGAPNRTSDITPQAQAADFDDSKWETIMPAALEQRRSHGRLAFNWYRTKIT
                     LPGKVGGFDVAGSTVVLELVLDDYAEIWIDGKLPLVLGQTGGQLIKGFNAPNRVVLTT
                     DARPGRQIQLAIFGINGPISQPPANFIWVRSATLDFYPRGQLGGTASAPAKVARLSSA
                     LDRIVPPNARLEKLAGGFQFTEGPVWHPDGYLLFSDPNANTIYRWSPEGSVSVFRTKS
                     GYTGFDIARYHQPGSNGLTLDPSGLLTINEHGNRRVTRLERTGKITVLADRYDGKRLN
                     SPNDLVYRADGALYFTDPPFGLPGTFHDPKKELPFSGVYLVKDGKVTLLTKELSGPNG
                     IAFSPDEKYLYVDNWDLQRKVLMRYPVNPDGSLGPGRVFYDFTSEREPVALDGIKVDV
                     EGNVYVSAPGGVWIL"
BASE COUNT          256 a          431 c          449 g          259 t
ORIGIN      
        1 agaatccaca ccccgcccgg agccgacacg tagacattgc cttccacatc caccttgatc
       61 ccgtcgaggg caaccggctc gcgctcgctg gtgaagtcgt agaacaccct gcccggtccc
      121 aggctcccgt cgggattcac cggatagcgc atcagcacct tccgctgcag gtcccagttg
      181 tccacgtaga gatacttctc atcgggggag aaggcgatcc cgttgggccc gctcagctcc
      241 ttggtcaaca gcgtgacctt cccatccttc accaggtaga cgccgctgaa gggcagctcc
      301 ttcttgggat catgaaacgt tccaggcaag ccgaacggcg gatcggtgaa gtagagcgct
      361 ccgtcggctc gatagacgag atcgttgggg ctgttgagcc gcttgccgtc gtagcgatcg
      421 gccaaaacgg tgatcttgcc ggtgcgttcc agccgggtaa ctctccggtt gccgtgctcg
      481 ttgatggtga gcaagccgct gggatccagc gtgagcccat tggaacccgg ctggtgatag
      541 cgtgcgatat cgaacccggt gtagccgctc ttggtgcgga acacggagac cgagccttca
      601 ggcgaccagc ggtaaatggt gttcgcgttg gggtcgctga agaggagata gccatccgga
      661 tgccagaccg gcccttcggt gaactggaat ccgccggcga gcttctccag ccgagcgttg
      721 ggcggaacga tccggtcgag ggcggatgaa agccgcgcga ccttggccgg agcactggca
      781 gtgcccccga gctgtcccct ggggtagaag tccagggtag cggacctcac ccagatgaag
      841 ttcgccggcg gctgcgagat cggtccattg atgccgaaga tcgcgagctg aatctgccgg
      901 ccgggacgcg cgtcggtcgt gagcaccacc cgattgggag cgttgaatcc cttgatgagc
      961 tggccacccg tttgccccag gaccagcgga agctttccgt cgatccagat ctcggcgtaa
     1021 tcgtccagca ccagctcgag cactacggtc gaaccggcca catcgaagcc gccgactttc
     1081 ccgggaagag tgatcttggt gcgataccag ttgaaggcga gccgcccatg ggagcgtcgc
     1141 tgctccagcg cagccggcat gatggtctcc cacttggaat cgtcgaaatc ggcagcttgg
     1201 gcctgaggcg tgatgtcgct ggtgcgattg ggagcaccgg atgcgcggag atcgggaccg
     1261 ggctcgtgat gattgactgt cacgatgtcc acgtcgctat agcgccattg ggcctgcacc
     1321 agtcgagctc cctcctcggt tcgtaggtcg accacggcag ccggcaacac cgccggcaga
     1381 tcgacggtcg cttgc
//
LOCUS       DASRPQ010000520         1707 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2580036, whole genome shotgun sequence.
ACCESSION   DASRPQ010000520 DASRPQ010000000
VERSION     DASRPQ010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1707
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2580036"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..780)
                     /locus_tag="VFD73_06195"
     CDS             complement(<1..780)
                     /locus_tag="VFD73_06195"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI73608.1"
                     /translation="MATTPVHAIATGVLQELDLVRESLADEYEIIEELGRGGMAMVYR
                     ARDRQLEREVAVKVLPFSLAFDTEFVERFQREARTAAQLEHPNIIPIYRVGRSGRVIY
                     FVMKYLRGGSLSAVLGARKKLTPPEIRRLLLEAGSALGYAAQRGIVHRDIKPDNIMFD
                     EFGQSLLTDFGIAKAASGQKLTGTGMSIGTPHYMSPEQARAQPIDGRSDIYSLGIVAY
                     QCLTGSVPYDGEDSFSIGYKHITEPIPTPTLITADERRVFEI"
     gene            1105..1557
                     /locus_tag="VFD73_06200"
     CDS             1105..1557
                     /locus_tag="VFD73_06200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73609.1"
                     /translation="MVPYHTIAFSQQKLRAALRRAAGQEPPFNYGFVVHSRRQNERPS
                     LGLITLHGESLAFNERLLKSLEGLPLWLFGHARITLLPGVTITPAEGGRTKQADRPLA
                     SMLMNIATFDTSTGVTQHLVQVEAVVKAESLVQPLLILTPSRPPAWPL"
BASE COUNT          336 a          547 c          510 g          314 t
ORIGIN      
        1 gatttcgaat acccggcgct catctgccgt aatgagcgtg ggggtgggaa tcggctcggt
       61 gatgtgcttg taaccgatgg aaaagctgtc ttcgccatcg taggggacac ttccggtaag
      121 acattggtag gccactattc ccagactgta gatatcgctt ctgccgtcga tcggctgggc
      181 gcgagcctgc tccggactca tatagtgcgg cgtgccgatg gacatgccgg tcccggtcag
      241 cttctgcccc gacgctgcct tggcaatccc gaaatcggtc agcaggcttt gaccgaactc
      301 atcgaacatg atgttgtcgg gcttgatgtc gcgatggacg atgccgcgct gagcggcgta
      361 gcccagagcg ctgcctgcct ccaggagcag ccgccggatt tccggaggag tcagcttctt
      421 tctggccccg agcacggcgg agagggagcc gccccgcaga tacttcatga cgaagtagat
      481 cacccggccg gagcggccga cccggtaaat cggaatgata ttgggatgct ccaattgggc
      541 ggcggtacgt gcttcccgct ggaaccgctc gacgaattcg gtgtcgaagg ccagcgaaaa
      601 cgggaggacc ttcaccgcca cttccctttc gagctgccgg tcccgggcgc gatacaccat
      661 ggccatgccc ccgcgtccga gctcctcgat gatctcgtac tcgtcggcca gcgactcgcg
      721 aaccaggtcc aattcctgga gcacgcccgt ggcgatggcg tgaaccgggg tggtcgccat
      781 caaatcgagc ccgcaggaag gacaaaactt ggatttaccg gtgatttcgc tgccacagcg
      841 ggagcagaac atatccgcgc aagctacgcg gacgacccgc tgagtcaagc cgaaacccgt
      901 ggcgtatcgc gagacagggt gcgaaaagca gggacgctgg aaggcgtggg agccaggacg
      961 atcgcagccg atctaaatca cgccactgca agggtcagag ggaaaacttt cgagcatgcc
     1021 tgcttcgctg ctcgcccgct gagaatggca cgtcacctgc agcaagttgc cctatccacc
     1081 tcgttacacc accctggaga gcctgtggta ccgtatcaca cgattgcctt cagccagcaa
     1141 aagctccggg ctgcactccg ccgggcggcg ggccaagagc cccccttcaa ctacggcttc
     1201 gtagtgcatt cacggcggca gaatgagcgg ccgagcctgg gcctgatcac attgcatggt
     1261 gaaagcctgg cattcaacga acgcctgctg aagtctctcg agggactgcc actctggttg
     1321 ttcggccacg cccggatcac gctgctgccc ggggtcacta taactccagc ggaagggggc
     1381 agaaccaagc aggccgaccg gcccctggca tcgatgctca tgaacattgc caccttcgac
     1441 accagcaccg gcgtgaccca gcacctggta caggtcgaag ctgtggtcaa agcagagagc
     1501 ctggtccagc cgctgctgat cctgactcca tccaggccgc ccgcctggcc gctatagaca
     1561 aaaaccctcc gggccacgac ctcggagggg ttgtgaatgt gtgccgtccc tacttccccg
     1621 cttccccacc tccctgcttc tccggtttat cgtccaccac ctgaaactcc tgcgtccggc
     1681 ggtctttgcg cccggcggcg tcgacga
//
LOCUS       DASRPQ010000521         1526 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2580297, whole genome shotgun sequence.
ACCESSION   DASRPQ010000521 DASRPQ010000000
VERSION     DASRPQ010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1526
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2580297"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            285..836
                     /locus_tag="VFD73_06205"
     CDS             285..836
                     /locus_tag="VFD73_06205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73610.1"
                     /translation="MFWFDTEPFLKAVYAFGEVLDGADPLDNVQVAVAINLPPEEVPW
                     ESTPEGTDWLADELRLSKGGFLYFWRSYLDPVWNHYIRGPVRVWSVDSGPDEQTLAAL
                     EARDFGSLNRLVPDPVDERLQLRDDLDAALAHLREVRDRYWDHDWRREHRGYGRYPEN
                     ELWEAVEGFLDLVDASRANKPDT"
     gene            complement(1242..>1526)
                     /locus_tag="VFD73_06210"
     CDS             complement(1242..>1526)
                     /locus_tag="VFD73_06210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73611.1"
                     /translation="RRVPSSLEDLRGQATGLVELPLHVAWSGRRVYDVGDDDQRLVLY
                     ALLLAEAQREDLERFVHRESLVSIWPRLRRLLGPHARREWERKLMTTACR"
BASE COUNT          279 a          504 c          497 g          246 t
ORIGIN      
        1 tcgcgacggg acatgaaccc tcctcgctga ggcctgatgc acaatgcatc ctttgctgtg
       61 attagtccac atcacaaggg ccgagcaggt caatgggcgc ggccggccaa tggagcggcg
      121 gcccaaagtg gccgcctcgg ccgggtccgc cggtctccaa acagattttc cgaacgggga
      181 agtgttcacg ccccgaggac cggatggcac gatatacggc catgaggcat aggcgcgctg
      241 tcgagaagct gcggatcctt gctgatgcat gcgagcgcgt gaagttgttc tggttcgaca
      301 cggagccgtt cctgaaggcc gtgtatgcct tcggcgaggt gctggacggg gccgacccgc
      361 ttgacaacgt tcaggtcgcg gtggcgatca acctgccgcc ggaggaagtc ccctgggaat
      421 ccactccgga aggcaccgac tggctggcgg acgagctgag gctcagcaag ggcggcttcc
      481 tgtatttctg gcggtcgtac ctggacccgg tgtggaatca ctacatccgc ggcccggtgc
      541 gcgtctggtc tgtcgatagc ggccccgacg agcagacgct cgcggcgctt gaggcgaggg
      601 atttcggctc gctgaaccgg ctggtcccgg acccggtcga tgagcggctt cagctccggg
      661 acgacctgga cgcggcgctg gctcatctgc gcgaggtccg cgacaggtac tgggatcatg
      721 actggcggcg cgagcaccgt ggctacggcc gctacccgga gaacgaactg tgggaagcgg
      781 tcgagggatt cctcgacctg gtcgatgcct cccgggccaa caagccagac acctgagatc
      841 ccgcacaaga cgtctccgcg gagacacatt gctcccgatc agagcagtcc tggcagttac
      901 ctggacggtg acgaagcccg gatcgagcgc ctccttcagc agatccatct ccagttcctc
      961 tcccgaactc ggcagccgca gcgtcaagcg tgcgtaccgg ccggtcgcct cgaccagttc
     1021 cacttgatat cccgtagcct ggaaggcatt ccggacatgt cctgcgatct ccggcagcgg
     1081 cgtgtcatcc cgcgtggcga aatccagatc ctgggacggg cgacgcagga tctcatgagc
     1141 ccggaaggca tagccacccg ccagcagcag gccgtagcgt tcgaagacgg gcaggccatc
     1201 aagcagcact cgcaggtgag cggcgggcag cccctcaagg ctcaccggca ggccgtcgtc
     1261 atcagcttcc gctcccactc gcggcgggcg tgcggaccca ggagccgccg caagcggggc
     1321 catatgctga ccagcgattc gcgatgcacg aaccgctcca ggtcctcccg ctgcgcctct
     1381 gcgagcagca gcgcatacaa gaccaggcgc tggtcgtcat cgccgacgtc atatacgcgc
     1441 cgtcctgacc aggcgacgtg caacggcaac tcgaccaggc cagtagcctg tcccctcagg
     1501 tcctccaggg aagacggcac ccggcg
//
LOCUS       DASRPQ010000522         4462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3825435, whole genome shotgun sequence.
ACCESSION   DASRPQ010000522 DASRPQ010000000
VERSION     DASRPQ010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4462
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3825435"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2637)
                     /locus_tag="VFD73_06215"
     CDS             complement(<1..2637)
                     /locus_tag="VFD73_06215"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HZI73612.1"
                     /translation="MIVPLLLLSIQQTSTPPAAYWQQQVGYEITAHLDESRGVLSGTE
                     RIRYVNHSPDTLSSFSLHLYLNAFRPGSRWSDADSAEGRRRFNDLKDPDFAFNHVRDV
                     RIGGAPVRAIYPFAPDSTVVRFALPRRLAPGDSTTAEVTWDARPSTVPRRQGRQGRRF
                     DFAQWYPKVVVYDRYGWEEHPLYPAGEFYGEFASFVVDLDVPADQVIGATGVPVCGDP
                     GWERANQNENQPVEYQRDYYGPRTPPPACDGAAPGRKRLRWYAEDVHHFALSLNPAYR
                     YEGGHFGNVAVHVLYQPGDELTWGGGVAVQRTETALTWLDQLYGAFAWPQITNVHRIE
                     GGGTEFPMMIMNGSADQGLIVHELGHNYTMGILANNEWREGWLDEGFTSFQTDWFWEA
                     MGRPDAYEGLEPEILGLDLDNYSEPPSLPGEAYRDFNSYNLAIYNRGEMFFQQLRYIV
                     GSATMHRILQTFYQRWKLKHVDEAAFRQVAEEVSHRDLSTFFAQWLHSTVLYDYAVGR
                     VRTEKAGRAEPSAGQRGRGAAGLYWKTRVEVVRKADGRIPVEVAVIAAHDTAVVRASG
                     MGEREWVELVTQTKPKEILLDPAVRTHDWNMLNNRKRLGFLFPRTLAPPPGTNFYFHP
                     YFSTRSQRDRLTVGLQPTVWYNDAGGVTLGFRSRDDYLGRFEQNVALITRSIGWGTDD
                     GVKDLDFFLRAKNPVFLRAPNLSETFDAYNIEGRYGGTAVLSWNRRAHLSFGPQWNER
                     VSLQWVAVDDARYLDPGSYDNVGTVEVQLGSGVSNEVGKWQLSLRGSAGGGLVYNRAG
                     LAASGRPELDPFYARAYVEGLVKRAIDRKLTLGIRGYVAGATGSHPAPKQRQIYFQGS
                     DPLAQLYNPFLRSRGALLVGEDF"
     gene            2662..3228
                     /gene="tnpA"
                     /locus_tag="VFD73_06220"
     CDS             2662..3228
                     /gene="tnpA"
                     /locus_tag="VFD73_06220"
                     /inference="COORDINATES: protein motif:HMM:NF033573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HZI73613.1"
                     /translation="MRRSAIIAGKHRCRAEDLAPLGTAPVEWSRPMTLPCGTMADVYL
                     SLRVHLVWATKNRRPWLDPEWRPRLYACVENIVERRGGKLLCAGGVRDHIHLYVETSG
                     AISIADLVSAIKASTTRWIHQSFSHRRDFRWQHGYGAFSVTGFEDEYLRDFIRNQETH
                     HRERAFTGELFGLLERHRIDYDPVHVLD"
     gene            complement(3362..3895)
                     /gene="atpH"
                     /locus_tag="VFD73_06225"
     CDS             complement(3362..3895)
                     /gene="atpH"
                     /locus_tag="VFD73_06225"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit delta"
                     /protein_id="HZI73614.1"
                     /translation="MRSETIARNYAETLFELGERDGNTERYADLLDAVAAAIEQTPRV
                     QAVLMSPKVPKSEKARILAAALRDTPREFVLFLQAMIKRGRQQLLREVATGYLGLLDQ
                     KLDRVRAGVTLARTPDERLKRTIQDGLSRQLGKQVIPAFTVDPEILGGTIIRVGERVL
                     DGSVRRRMTRLRRQLLS"
     gene            complement(3892..>4462)
                     /gene="atpF"
                     /locus_tag="VFD73_06230"
     CDS             complement(3892..>4462)
                     /gene="atpF"
                     /locus_tag="VFD73_06230"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HZI73615.1"
                     /translation="SLSTQTGVLMLSLILALAQHEEQATSGPLVVNGGLVIWTLVVFG
                     LLLFILKKWAYPPMIAAVEAREKALEDQLAEAERNRREAAELLAQHQKLLADGRAQAH
                     ALLAEARTASEKERALAIEKTRQEQEELLERARRDIASERDRAVVELRREAVDLSLAA
                     ATKLIGERLNSENDRRIVQEYLSSLGGQH"
BASE COUNT          812 a         1466 c         1356 g          828 t
ORIGIN      
        1 gaagtcttct cccaccagca gcgcgccgcg agagcgaaga aacggattgt acagctgggc
       61 caacggatcg gagccctgga aatagatctg tctttgcttc ggcgctgggt gactcccggt
      121 ggcgccggcg acatagccgc ggataccgag agtgagcttc cggtcgatgg cacgcttcac
      181 cagcccttcg acgtacgccc tggcgtagaa cggatccagc tccggccggc cactggcagc
      241 gaggccggcc cggttgtaca ccagcccgcc tccggccgag ccgcgcagcg acagttgcca
      301 cttgccaacc tcgttgctca ctccgcttcc gagctgcacc tcgaccgttc cgacgttgtc
      361 gtaggagccg gggtccaggt agcgagcgtc atccaccgcg acccattgca agctcacccg
      421 ctcgttccac tgcgggccga aactgaggtg cgccctccgg ttccacgaca gcactgcagt
      481 tccgccgtag cggccttcga tgttgtaggc gtcgaacgtc tcggagagat tcggtgctct
      541 gaggaacacc ggattcttcg cccgtaagaa gaagtcgaga tccttcaccc cgtcatcggt
      601 accccagccg atgctccggg taatcagcgc gacgttctgc tcgaaccttc ccaaatagtc
      661 gtctcggctt cgaaatccga gcgtcacccc gccagcgtcg ttataccaga ccgtcggctg
      721 cagacccacg gtgaggcggt ccctttgcga ccgggtcgag aagtagggat gaaagtagaa
      781 gtttgtaccc ggcggaggag ccagcgtcct ggggaaaaga aaccccagtc gcttccgatt
      841 attcagcatg ttccaatcat gggtccgtac cgcggggtcc agcagaattt cctttggctt
      901 ggtttgagtg accagctcga cccattcccg ctcccccatt ccggaggccc ggaccaccgc
      961 ggtatcgtga gcggcaataa cggcgacctc gaccggaatt ctcccgtcgg cctttcgcac
     1021 gacttcgact cgagtcttcc aatacagtcc agctgccccg cgcccccgct gccccgccga
     1081 cggctccgcc cttcccgcct tctcagtcct gactctgccg accgcatagt cgtaaagcac
     1141 tgtcgaatgc agccactggg caaagaacgt cgacaagtcg cggtgcgata cctcctccgc
     1201 cacctgccga aaggcggctt catccacgtg tttcagtttc cagcgctgat agaacgtctg
     1261 gagaatgcga tgcatcgtgg cggatccgac gatgtagcgc agctgctgga agaacatctc
     1321 gccgcgattg tagatcgcca ggttgtagga gttgaaatcg cgatacgctt cgcctggcag
     1381 gctgggcggc tcggagtagt tgtccagatc gagcccgaga atctctggct ccagcccttc
     1441 gtaggcatcc ggccggccca tcgcctccca gaaccagtca gtctggaaac tggtgaaccc
     1501 ctcgtccagc cacccttccc tccactcgtt gttcgccagt attcccatgg tgtagttgtg
     1561 ccccagctcg tgcacgatca agccctgatc ggccgagccg ttcatgatca tcatgggaaa
     1621 ctcggtgccg ccgccctcga tccggtgaac gttcgtgatc tgcggccagg cgaatgcgcc
     1681 atagagctgg tccagccagg tcagcgcggt ctcggtccgc tggaccgcaa caccgccgcc
     1741 ccaggtgagc tcgtcgccgg gctgatacag cacgtgcacc gcgacgtttc cgaagtggcc
     1801 gccctcatag cgatacgccg ggttcagcga aagcgcgaag tggtggacat cttcggcgta
     1861 ccagcgtagc cgcttccgtc ccggcgcggc gccgtcgcac gcaggcggcg gtgtgcgggg
     1921 gccgtaatag tcccgctgat actccaccgg ctggttttcg ttttgattgg cgcgctccca
     1981 cccgggatcg ccacaaacgg gaaccccggt ggcaccgatc acctgatcgg caggcacatc
     2041 caggtcgaca acaaacgagg cgaactctcc gtagaactcg ccggcaggat agagcgggtg
     2101 ttcctcccag ccataccggt cgtacaccac gaccttggga taccattgag cgaagtcgaa
     2161 ccgccgcccc tggcgtcctt gccggcgggg aacggtcgac ggtcgggcat cccaggtcac
     2221 ctcggcggtg gtcgagtcac ccggcgccag tcggcgcgga agagcgaacc gcacgaccgt
     2281 gctgtccggc gcgaacggat agatggcccg aaccggagcg ccaccgatcc ggacgtcacg
     2341 cacgtggttg aaggcgaagt ccggatcctt gagatcgttg aaacgccggc gtccctcggc
     2401 agaatcggca tcggaccacc gcgatcccgg gcggaacgca ttgaggtata ggtgcagcga
     2461 gaagctcgag agtgtatccg gtgaatggtt gacgtagcgg attcgctcgg tgccgctcaa
     2521 cactccccgc gactcgtcca gatgcgcagt gatctcgtag ccaacctgct gctgccaata
     2581 ggcggctggt ggggtgctgg tctgttgtat cgacaaaaga aggagcggga cgatcacgcg
     2641 ggaactcggg aagaggcgtc gatgcgcagg tcggccatca tcgccgggaa acataggtgt
     2701 cgagcggagg atttggcacc gctcggcacc gctccggttg agtggtcgcg gccgatgacg
     2761 ctaccgtgtg gcacgatggc cgatgtctat ctctcgcttc gagtgcacct cgtctgggca
     2821 accaagaatc ggcggccttg gctcgatccg gaatggcgac ccaggttgta cgcctgcgtg
     2881 gagaacatcg tggaacgcag gggcggaaag ctcttatgtg ccgggggcgt gcgggaccac
     2941 atccatctct atgtggagac gtcaggtgca atctccattg ccgatctggt gagcgccata
     3001 aaggcaagca ctacgcggtg gattcatcaa agcttttcgc atcggcgaga cttccgatgg
     3061 cagcacggct atggcgcatt cagcgtgaca gggttcgaag acgagtacct gcgggatttc
     3121 atccgcaatc aggagaccca tcaccgggag cgagccttta ctggagagtt gttcggcctg
     3181 ctcgagcggc accggatcga ttacgatccc gtccacgtgc tggattgacc ctgactaggc
     3241 gagaggccgc ccaaatgaag agccccgccg atagagcggg gcaacgcggc acacagaatt
     3301 tcccaatggt caggcgttga ggggcggcta tataccggat ccctgcggag atttgtcagc
     3361 gttacgacaa cagctgccgg cgcagcctgg tcatccgccg gcgtaccgag ccatccagca
     3421 cccgctcgcc cacccggatg atcgtcccgc cgagtatctc cggatccacc gtgaatgccg
     3481 ggatcacctg cttgccgagt tgccggctca ggccatcctg gatcgtgcgc ttgagccgct
     3541 cgtcgggtgt ccgcgccagt gtcaccccgg cccgcacccg atcgagcttc tggtccagca
     3601 atcccaggta tccggtcgcg acttcgcgca gcaactgctg ccgccctcgc ttgatcattg
     3661 cctggaggaa gagcacgaac tcgcgcggtg tgtctcgcag tgcagcggcc aggatccgcg
     3721 ccttctccga cttcggcacc ttgggcgaca tcagcaccgc ctgtacccgc ggcgtctgct
     3781 ctatcgctgc ggccaccgca tccagcagat cggcgtagcg ctcggtgttc ccgtcacgtt
     3841 caccgagctc aaacagcgtt tcggcgtagt tcctggcgat cgtctcgctt ctcaatgctg
     3901 gccacccaga ctgctgagat actcctgaac gatacgccgg tcgttctccg agttgagccg
     3961 ctcaccgatc agcttggtgg ccgcagccag cgagagatcg accgcttccc gccggagctc
     4021 gaccacggcg cggtcccgct ccgaggcaat gtctctccgg gctcgctcca gcagctcctc
     4081 ctgctcctgg cgtgtcttct cgatcgcgag cgcgcgctcc ttctctgatg cggtgcgcgc
     4141 ctcagccagc agcgcgtgcg cctgagcccg gccgtcggca agcagcttct ggtgttgcgc
     4201 cagcagctct gcggcttcgc gccgattccg ctccgcctcg gcgagctggt cctccaacgc
     4261 cttttcccga gcctccacgg cggcgatcat cggaggatac gcccacttct tcaggatgaa
     4321 gagcagcagg ccgaagacca cgagggtcca gatcaccaga ccgccattca ccacgagggg
     4381 gccgctggtg gcctgttcct cgtgctgggc cagagcgagg atcaaagaaa gcatgaggac
     4441 tccagtttga gtcgagaggg ag
//
LOCUS       DASRPQ010000523         1400 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2254615, whole genome shotgun sequence.
ACCESSION   DASRPQ010000523 DASRPQ010000000
VERSION     DASRPQ010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1400
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2254615"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..246
                     /locus_tag="VFD73_06235"
     CDS             <1..246
                     /locus_tag="VFD73_06235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73616.1"
                     /translation="EAIAGFLRDISGWRGPRHYRLVPTRANGQPAFGCYLQDDQAQVF
                     RAHGMIVLTLSGERISAVTRFVDNSTMARFGLPRMLG"
     gene            352..426
                     /locus_tag="VFD73_06240"
     tRNA            352..426
                     /locus_tag="VFD73_06240"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:384..386,aa:Val,seq:gac)
     gene            1010..>1400
                     /locus_tag="VFD73_06245"
     CDS             1010..>1400
                     /locus_tag="VFD73_06245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73617.1"
                     /translation="MKRSRLAALSLLSIPLLAAGALPASAASAASHAASQAKVLKDTA
                     GSIDEPLCQSNKSTCVDAAGTIAGKYVGHDEPSVLFKSGRPGSGNDMTYTITLPKDPK
                     TQPNASGAGGSTWNFQLRPTFWFGLTLC"
BASE COUNT          246 a          441 c          458 g          255 t
ORIGIN      
        1 gaggcgatcg ccggcttcct gcgcgacatc tcgggctggc gcggtccccg gcactaccgg
       61 ctcgtgccga cccgtgcgaa cggccagccg gccttcggct gctacctgca ggacgaccag
      121 gcgcaggtgt tccgcgcgca cgggatgatc gtgctgacgc tgtcgggtga gcggatctcg
      181 gctgtcacgc ggttcgtcga caacagcacc atggcgcggt tcgggctgcc gcggatgctg
      241 ggttgagttg gcgggctgcg gagccggccg ggagtacctg gatagccctt cggcgcagct
      301 cgtcgtggcg gacgccgcct gatccggagt ctggtaggct ctcgtcatcc cgggccgttg
      361 gcgcagcggg agcgcgtctc cctgacacgg agaaggtcac tggttcaaat ccagtacggc
      421 ccaccaggtt aaattagagt atcgaatagc tcgactgatc atggggacca ctccggggcc
      481 aagcgattcg cttcgagcca ctcatgctgc gatagggact gcgggcatgt ctcacgcgcc
      541 gggcgcccgc cagcagcctg cacccgggtg aacgtctgag gtcgtgtgac ggcagaggta
      601 tctgatgtct ggtggaaatg gtaataagat agccatttcg cgcgttacat acccggacgt
      661 gggccggact gccggttaaa tcgcggctaa ttcgcatggg acggaatcgc ctgctggaca
      721 gcagatccag ataacgaaaa gcgtcaagta aagatttttg gtttttgggg ctttcggcac
      781 gattcgtgcg gctgtatgtt catcttgttc agttttgccc gcagcctcag cgggtcgcgg
      841 cgccgcaggc tccgcgctgc tccctggacg gaggagcagc cggggttcgc tcagctatgc
      901 gctgagaccg atcgggcagg taagtcagac gactcaggca gtccaaatga ccatccgtca
      961 gcagctacca cccgctccct ggcttcgctg atggacgaaa ggacagagat tgaagcgatc
     1021 cagactggct gcgctcagcc tcctgagcat tcccctgctg gcggccggcg cccttcccgc
     1081 gagcgccgcg agcgccgcga gccacgccgc ctcacaggcc aaggtcctca aggacaccgc
     1141 tgggagcatc gacgagcctc tctgccagag taacaagtcg acctgcgtcg atgccgccgg
     1201 caccattgcc ggcaagtacg tcggccacga cgagccgtcc gtcctgttca agtccggccg
     1261 tcccggttcg ggcaacgaca tgacctacac gataaccctg ccgaaggatc cgaagaccca
     1321 gccgaacgcg tcgggtgccg ggggctccac ctggaacttc cagctgaggc cgacgttctg
     1381 gttcgggctc acgttgtgcg
//
LOCUS       DASRPQ010000524         1096 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4449496, whole genome shotgun sequence.
ACCESSION   DASRPQ010000524 DASRPQ010000000
VERSION     DASRPQ010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4449496"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            60..269
                     /locus_tag="VFD73_06250"
     CDS             60..269
                     /locus_tag="VFD73_06250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73618.1"
                     /translation="MRRSLTAVAVMGVCLAVFAWQEWAARQPRVAPRGQPALVDVRQS
                     GVEELRRQFNAAEGETRVVALLSPT"
     gene            279..674
                     /locus_tag="VFD73_06255"
     CDS             279..674
                     /locus_tag="VFD73_06255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73619.1"
                     /translation="MRGASALNEALQEVAGNPMKVFVVWEPILVTDLQPPTTAALARV
                     SDVRAAQFWDKDRQVSKAIAGEITRRGQDAEQHRYRSKGGVLWDTIAIYPPGVKWAGS
                     GPAPSYTGGPVVDVESEFRKALIIGKLSR"
     gene            836..>1096
                     /locus_tag="VFD73_06260"
     CDS             836..>1096
                     /locus_tag="VFD73_06260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000183325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HZI73620.1"
                     /translation="MRAASEVGQFPSIGPPEVAFLGRSNVGKSSLINSLLGEKMAKTS
                     RTPGRTRTINFFEVRRPGQPRADYYFVDLPGYGYAKLPREQTA"
BASE COUNT          216 a          271 c          425 g          184 t
ORIGIN      
        1 gaacgcaagc attatcagtg cgagcacgga ggaaggctcg cggtgggaat cccgctgaca
       61 tgagacgcag cctcacagcc gtagcggtga tgggtgtctg cctggcggtg tttgcgtggc
      121 aggagtgggc ggcgcggcag ccgagggtcg cgccgcgcgg ccagccagcg ctggtggacg
      181 tgcggcagag tggagtggag gagttgagga ggcagttcaa cgccgcggag ggagagactc
      241 gggttgtggc gctgctgtcg ccgacatgag gagtgtgctt gcggggggcc tccgcactca
      301 acgaagcgct gcaggaagtc gcaggaaatc cgatgaaagt gttcgtagtg tgggagccga
      361 tcctggtgac ggacttgcag ccgccgacga ctgcggcgct ggcgagagtg tcggatgtgc
      421 gggcggcgca gttctgggac aaggacaggc aggtgtcaaa ggcgatcgcg ggcgagatca
      481 cccgacgcgg acaggacgca gagcagcacc ggtatcgcag caaaggcgga gtgctatggg
      541 acacaatcgc gatttatccg cccggagtga aatgggcggg cagcggtccg gcaccgagtt
      601 atacgggcgg gcctgtggtg gatgtggaga gcgagttcag gaaggcgttg atcatcggca
      661 agttgtcgag atgaggattt gtcggattta gtgatcgccc cagcaagagc gtccagggtg
      721 gcacaccctt cgcgtcagtc gcgtgcgaac gggatgacag ttgtttacag ttctgcgctg
      781 gacaaaggcg gagggcaggc gggacactgt agcggtgcgg gtgaatgcca agtttctgag
      841 agcggcgtcg gaggtgggac agttcccttc gatcgggccg cctgaggtcg cgttcctggg
      901 gcgatcgaat gtggggaagt ccagcctgat caactccctg ctcggcgaga agatggcgaa
      961 gacgagccgt acgccagggc gaacgcgcac aattaatttt tttgaggtca ggcggccggg
     1021 acagccgcgc gccgactact actttgtgga cctgccggga tacggatacg ccaaactgcc
     1081 gcgggagcag acggcg
//
LOCUS       DASRPQ010000525         1562 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3204052, whole genome shotgun sequence.
ACCESSION   DASRPQ010000525 DASRPQ010000000
VERSION     DASRPQ010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1562
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3204052"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..318)
                     /locus_tag="VFD73_06265"
     CDS             complement(<1..318)
                     /locus_tag="VFD73_06265"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI73621.1"
                     /translation="MTVNGARLNYLDWGGAGTGMVFIHGLGDSPHAFDGIAPAFRNHF
                     RVIAYARRAHGRSQVVGPYTHSVLAEDLRQLLDSLHIRKAVLVGWSLGGNELAEFTAA
                     HPDR"
     gene            541..1059
                     /locus_tag="VFD73_06270"
     CDS             541..1059
                     /locus_tag="VFD73_06270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73622.1"
                     /translation="MGPRLNALSLRAEKSFRPWQWTLIFVSVALMDYLTGPSIHSAIL
                     FYFIPVGMAAWSGALWWALGLASIWPFLRLYIESLWHVTAPWALTLDDTLLNWIVSAG
                     FATLVWHLIRQERRLRILQGMLPICGFCKRIRSGAEWQQIEQYITDHSEAQFSHTFCP
                     ECRKQHYPQYFN"
     gene            complement(1064..1336)
                     /locus_tag="VFD73_06275"
     CDS             complement(1064..1336)
                     /locus_tag="VFD73_06275"
                     /inference="COORDINATES: protein motif:HMM:NF021452.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2164 domain-containing protein"
                     /protein_id="HZI73623.1"
                     /translation="MSVQLSDEAQEQATASLQRFCTEELDVSLSGIQITMLLKFVLAE
                     IAPSAYNAGVAAAEAFLRDRLADLEATCYEPEFTYWPKGASVRRKR"
BASE COUNT          285 a          504 c          463 g          310 t
ORIGIN      
        1 ccggtcggga tgagccgccg tgaactcggc gagctcattt ccgcccagtg accagcccac
       61 caggaccgcc tttctgatgt gcaggctgtc gagcagctgt cgcagatcct ccgccaggac
      121 cgaatgagtg taaggtccga cgacctggga tcgcccgtgg gctcggcggg cataggcgat
      181 cacgcggaag tgattgcgga aggcaggagc gatcccgtcg aaggcgtgcg gcgagtcacc
      241 caacccgtgg atgaacacca tgcccgtccc ggcgccgccc caatccagat aattcagccg
      301 ggcgccgttc accgtcacga agccgctcct gggcacggga ggactggacg tcctgggccg
      361 cgctccgcag gccgcgagca gcaccgctgc ggcgagaagc cctggaccta gccgccgcaa
      421 gaccgagtgt gtgggatcga gaccaaggtc agccgcactg atggtgccta gacgatctct
      481 ccaggcatac atttcttggg tatgttcgca tcgtctccgg taaccttctg gcgctctatg
      541 atgggacccc gtctcaatgc gctgtccctt cgtgcggaga agagcttccg cccctggcag
      601 tggaccctga tcttcgtctc agtcgccttg atggattatc tcaccgggcc ctcgatccac
      661 tcagcgatcc ttttctattt catcccggta gggatggcgg catggagcgg tgccctctgg
      721 tgggctttgg ggctagccag catttggccc tttctgcgcc tctatatcga atccctctgg
      781 cacgtcaccg cgccctgggc gctgaccctc gacgacaccc tgttgaattg gatcgtgtcg
      841 gcaggctttg ccacgttggt ctggcatctc atccggcagg aacgcaggct tcggatcctt
      901 cagggaatgc tgccgatctg cgggttctgc aagcgaattc gcagtggagc cgagtggcag
      961 cagatagaac agtacatcac cgatcattcc gaagcccagt tctctcacac cttctgcccc
     1021 gagtgtcgca agcagcacta cccgcagtac ttcaactgaa cgcctatcgc ttgcgacgaa
     1081 ccgacgcccc cttgggccaa taggtgaatt caggctcgta gcaggtcgcc tcgagatcgg
     1141 ccagtcgatc ccgcaagaac gcttccgccg ccgcgacgcc ggcgttatac gcgctcggcg
     1201 caatctccgc cagaacgaac ttcaggagca tggtgatctg aatgccggac agcgagacat
     1261 ccagctcctc ggtgcagaat cgctggaggg aggccgtcgc ttgttcctgc gcttcatcgg
     1321 agagctgaac actcatctta gcctcaaacg gtggtcagtg tttcacgttg gtgtgtgcct
     1381 accggcactg cacctcacaa tcgggctgtt acgctggctg cccgccgccg cctccttcga
     1441 gacccttgcg accggcggcc aagaaagtag cgccttcttc aactcaggtg gtgcgctgcc
     1501 ggtagcgtgc aacgagagtg gaccatgcaa cgccatagct gggccaagtg gcctggtcat
     1561 ca
//
LOCUS       DASRPQ010000526         1356 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3204135, whole genome shotgun sequence.
ACCESSION   DASRPQ010000526 DASRPQ010000000
VERSION     DASRPQ010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3204135"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..698)
                     /locus_tag="VFD73_06280"
     CDS             complement(<1..698)
                     /locus_tag="VFD73_06280"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: protein motif:HMM:NF015647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HZI73624.1"
                     /translation="MTERPTLAIGLMSGTSLDGMDAALVRLEGPTHATLLQFVTRPYS
                     GEERGQIRNALNGATAAELARLHVRVAEWAADAVQAVLTASGVVASEISLIAFHGQTV
                     WHEPPLVSWQLGEPAVLAERFGVRVVSGFRARDVAAGGQGAPLVPMADLLLFAAPDAP
                     RILLNLGGMANLTFVQRRAQEDGVLAFDTGPGVAIIDATARLVDPATDFDRDGRIATQ
                     GRIKLAVLDELLADP"
     gene            complement(695..>1356)
                     /locus_tag="VFD73_06285"
     CDS             complement(695..>1356)
                     /locus_tag="VFD73_06285"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: protein motif:HMM:NF003915.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016835 - carbon-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046348 - amino sugar catabolic process
                     [Evidence IEA];
                     GO_process: GO:0097173 - N-acetylmuramic acid catabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HZI73625.1"
                     /translation="TFGTAPEMVVGVIAGGAPALVRSVEGAEDDMDAAASEMERLRVT
                     PSDVVVGIAASGTTPFVQAALSRAHQLRARTVFLSCTEPPRQLQGMCDVFITVLVGPE
                     IVTGSTRMKAGTATKLVLNTLTTGAMIRLGKVYGNLMVDLRAWNEKLIDRSQRIVMET
                     TGLDRGAARKVIQAAEGSVKTAIVMARRGVAKPEAERLLAEHAGRLRPIVGDPPPVRS
                     R"
BASE COUNT          244 a          473 c          412 g          227 t
ORIGIN      
        1 ggatcggcca acaactcgtc gagtaccgcg agcttgatcc gtccctgggt ggcaatgcgt
       61 ccgtcccgat cgaaatcggt cgcaggatcg accaggcgtg ccgtagcatc gatgatcgcc
      121 acacccggac cggtgtcgaa cgccaggaca ccatcctcct gcgctctccg ttgcacgaac
      181 gtcaggtttg ccatgccgcc cagattgagg agaatgcgcg gggcgtcggg tgccgcgaac
      241 agcagtagat cggccatggg aacgagcggt gctccctgcc ctcccgctgc cacgtcgcgg
      301 gctcgaaacc cactcacgac tcgaaccccg aaccgctccg ccagcaccgc aggctcaccc
      361 agttgccatg agaccagcgg tggctcgtgc cacacggtct gaccatggaa tgcgatcagg
      421 gaaatttcgg aggcaaccac accgctagca gtcaacaccg cctgcaccgc gtcggcagcc
      481 cattcagcca ctcggacgtg caaccgggcc agctctgccg cggtggcgcc gttcaaggcg
      541 tttctgatct ggcctcgctc ttcaccgctg tacgggcggg tcacaaactg gagtaaggtc
      601 gcatgggtgg ggccttccaa tcgaaccagc gcggcgtcca tcccatccag cgaggtgccg
      661 gacatcagac cgatggccag cgtaggccgc tcggtcatcg cgagcgcacc ggaggtggat
      721 caccgacgat cgggcgcaac cgtcccgcat gctcggcgag cagtcgttcg gcctctggct
      781 tggcaacccc cctccgggcc atgacgatgg cggtctttac gctgccctcc gccgcctgaa
      841 tgactttccg cgctgcaccg cggtccagac cagtggtctc catgacgatg cgctggctcc
      901 ggtcgatcag cttctcgttc caggcccgga gatccaccat gagattgccg tacaccttcc
      961 ccagccggat cattgccccg gtggtgaggg tgttgagcac cagcttcgtc gcggtccccg
     1021 ccttcatgcg ggtagagccg gtgacgatct ccggtccgac caataccgtg atgaagacat
     1081 cacacatacc ctgcagctgt cggggaggtt cggtgcagga caaaaatacg gtacgtgccc
     1141 gaagctggtg tgcccgcgac agggccgcct gaacgaaggg cgtggttccg ctcgcagcga
     1201 tgccgaccac gacatcactc ggggtaaccc gcaagcgttc catctcgctt gccgctgcat
     1261 ccatgtcgtc ctcggcgccc tcgaccgagc gcaccaaggc gggcgcgccg ccggcgatga
     1321 cgccgaccac catctcggga gccgtgccga acgtag
//
LOCUS       DASRPQ010000527         1126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1628495, whole genome shotgun sequence.
ACCESSION   DASRPQ010000527 DASRPQ010000000
VERSION     DASRPQ010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1628495"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1126)
                     /locus_tag="VFD73_06290"
     CDS             complement(<1..>1126)
                     /locus_tag="VFD73_06290"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HZI73626.1"
                     /translation="NARIEEITCTTIHGFCQRLIKPYPVEANIDPGASVLGRDEAEQR
                     FEELMDAWLRQHLSGKSSSLVAEMVLANPVQALEAIRRVAGCLRHGRPVGTRPATDIH
                     ETVATFQSRVQAFRAFIDGSPADEPDTAACVSAFAEMAASADRALAGEGSATFVALVT
                     LKAHDTLCKADGDFTKYRCKTKWREAAKKVGLPKNDGEHLNEEAERHHAACCEAWRAM
                     RSNAASRILEDLVGELCPLVDRFRTYKRSTAVLDFDDLIFSARDLLRDHEPVRRALAA
                     RYAHVLVDEFQDTDPLQTEIFWRLCGDPPAGQADADWERFVLRPGALFLVGDPKQAIY
                     RFRGADVSAYLRARDAIRAQSAENVISISTNFRSCASILA"
BASE COUNT          203 a          354 c          376 g          193 t
ORIGIN      
        1 aaggccagga tcgaggcgca ggatcggaag ttggtggaaa tcgagatgac gttctcggca
       61 gactgggccc ggatcgcatc acgcgcgcga agataggccg aaacgtcggc accccgaaag
      121 cggtagatgg cctgcttggg atcccccacc aggaacaggg ccccaggccg caggacaaag
      181 cgttcccagt ctgcatcggc ctgcccggcc ggcgggtcgc cgcacaagcg ccagaagatt
      241 tcggtctgga gcggatcggt atcctgaaac tcgtccacca gcacatgggc gtagcgggct
      301 gccagggccc gccggaccgg ctcgtggtct ctcagaaggt cccgggcgga aaagatcaga
      361 tcatcgaagt ccaagacggc ggtggagcgc ttgtaggtcc ggaaccgatc aacaagcggg
      421 cagagctcgc cgacgaggtc ctcgaggatg cggctggctg cgttcgagcg catcgctcgc
      481 caagcctcac aacaagcagc atgatggcgc tcagcctcct cgttgaggtg ctccccgtcg
      541 ttcttgggca ggcccacctt ctttgcggcc tcgcgccact tggtcttgca gcgatatttt
      601 gtgaagtccc catcagcttt gcacagcgtg tcgtgggctt tgagggtcac caaggcgacg
      661 aaggtggccg atccctcccc tgcgagggcc ctgtctgccg aggcagccat ctccgcgaag
      721 gccgaaacac aggcagccgt gtccggctcg tcagccgggc tcccgtcgat gaaggcccgg
      781 aaggcttgaa cgcgggactg aaatgtggcg acggtctcat ggatgtcagt agcggggcgg
      841 gtcccgaccg ggcggccgtg gcgcaggcat cccgcgaccc ttctgattgc ctccagggcc
      901 tggacggggt tggccaggac catctcggca acaaggctgc tgctcttgcc tgagaggtgc
      961 tgcctgagcc aggcatccat cagctcctcg aagcgctgtt ccgcttcgtc ccggcccagc
     1021 accgaggcgc ccgggtcgat gttggcctcc accggatagg gcttaatcag gcgctggcag
     1081 aagccgtgga tcgtcgtaca ggtgatctcc tcgatccggg cattgg
//
LOCUS       DASRPQ010000528         3285 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_377454, whole genome shotgun sequence.
ACCESSION   DASRPQ010000528 DASRPQ010000000
VERSION     DASRPQ010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3285
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_377454"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(84..1121)
                     /locus_tag="VFD73_06295"
     CDS             complement(84..1121)
                     /locus_tag="VFD73_06295"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73627.1"
                     /translation="MRIAVVFDTPYLGWDHAAHQRQMEKEIAAWDADEPEMEYQIANA
                     LLERGHEVRLLGVRDDLEELIRQLGDWDPELVFNGAEAFRGEESLEYLLPGLLEAEGY
                     RYTGAPPLSLQVTRNKAISKKVLAYFGIQVPGFVSYRLHEKVAEDPNLRFPVIVKPLQ
                     ADASIGIAQASVVQTLDALAERVEFIHARFGQGAIAEEFVDGRELYVSIIGNDDALDV
                     LPMTELVFDKRKTRPEERIATQFAKWDESYRERKGIRNVFARPVSQSIREQIVETCRI
                     AYRALWLRDYARLDLRLTPDGRVWVLEANANPFISYGHDMANAAAKAGFEYCDFIQKI
                     VDAAMQRYERA"
     gene            1345..2856
                     /gene="dacB"
                     /locus_tag="VFD73_06300"
     CDS             1345..2856
                     /gene="dacB"
                     /locus_tag="VFD73_06300"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HZI73628.1"
                     /translation="MHRRLLQTLVIAMLGGALVASRVQAQDLSAVERVGVDDWFRRTS
                     DRTADGQWGIVIGAMNGHVLWSVNPELELIPASTAKLFTVGFTRLRAGGGARISTRVI
                     GRGTLDTTSGRWLGGWQLELGGDPTLERPGRAGPTLRELARQLRDRGIRTLQGAMTLT
                     SRTGPATSRYPAVWSAEFIGQLYAPPVGPVTLHENTVSLTFRPGQDVGSPPTLVSAVP
                     AGVERLVRMAATTVGGTRRRLSLTADADGGWTLSGTIGLYARPAGLSAVAHEPTSVLA
                     YAWAAALNRAGIDWVDRTSPAPAVPGLPTVLAKVESEPLDSVALEINRRSLNIGAELI
                     LQWAAASQTAGPGLVTDHVRDVVGPRAQIRMVDGSGLSELDRVSPMTQMLYLARYPQQ
                     RGAERFPLLLPANGVGTLRGLRYGMGRGVVHAKTGTLDQVATLAGYLGRPDGVLVISL
                     MYNGRRTHAARAAEWELFRLLGAEGVNLSGALDTHMGGGTNQDEESSDTLVER"
     gene            2990..3250
                     /locus_tag="VFD73_06305"
     CDS             2990..3250
                     /locus_tag="VFD73_06305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73629.1"
                     /translation="MDSTVRHARLKPEFAELYPPLKADIWEPAAEMGARVLLWQLQQQ
                     GTAALGTRLLDERHFEFRGGWCRGSETDLRTRVCDPAFNGPV"
BASE COUNT          596 a         1012 c         1045 g          632 t
ORIGIN      
        1 tcgagcagaa ccccatgtag cgctgcacca ggtgaccgca gacgcagcgt tgctcgcgcg
       61 gccacgcccg cgcccgccgg cgtctacgcc cgctcatatc gttgcattgc agcgtccacg
      121 atcttctgga tgaagtcgca atattcgaag ccggccttgg cagcggcgtt ggccatgtcg
      181 tgtccgtagc tgataaacgg attggcgttt gcttccagga cccacacccg gccgtccgga
      241 gtaagccgca gatccagacg cgcatagtcg cgaagccaga gtgcgcgata ggcgatccgg
      301 caggtctcga caatctgttc ccggatcgac tgtgagaccg gccgggcaaa cacgttgcga
      361 attcctttac gctcccggta cgactcgtcc cacttggcaa actgggtggc gatgcgctcc
      421 tccggccggg tcttccgttt gtcgaaaacc agttcggtca tcgggagaac atcgagggcg
      481 tcgtcattgc cgatgatgct cacgtacagt tccctgccgt ccacgaattc ctcagcgatg
      541 gcaccctggc caaaccttgc gtgaatgaac tcgacccgct ccgccagcgc atccagagtc
      601 tgtactaccg aggcttgggc gatgccgatg gacgcgtcgg cctggagcgg cttcacgatc
      661 actggaaatc tgaggtttgg gtcctcggca accttctcat gcagccgata gctcacgaac
      721 ccggggacct gaatgccgaa gtaggccagg accttcttgc tgatggcctt gttgcgagtg
      781 acttgaaggg atagtggggg agcgccggtg tagcgatagc cctcggcctc gagcaacccg
      841 ggaagcaggt actccagcga ctcctcgcca cgaaatgcct cggcgccgtt gaacaccaat
      901 tccggatccc agtcgccgag ttggcggatc agttcctcga ggtcgtcccg cacgccgagc
      961 agccggacct catgaccgcg ctcgagcagg gcattggcga tctggtactc catttcaggt
     1021 tcatcggcgt cccacgcggc gatttctttt tccatctgcc gctggtgcgc agcgtggtcc
     1081 caccccaggt agggcgtatc gaagacaacg gcgatgcgca tgatgcgtag caagatttcc
     1141 ggactcggct tccaatgcta gttcgcagcc gccaggcgaa ttatccgccg gcttcgacca
     1201 cctcgcgaaa tgcccgaaac gggacctgaa aactccggct aagtcattgg taattctcta
     1261 tctggtatat ggctcgacga ttgctcctct cggatgggat acgtcagcaa ttgcatccct
     1321 ttcacgaacg gaacgagccg agtcatgcat cgtcgtctgt tgcagacgct ggtcattgcg
     1381 atgctgggcg gagcgcttgt cgcgtcccgc gttcaggcgc aagacctctc cgccgttgag
     1441 cgggtcgggg tcgacgactg gtttcgtcgc acttccgacc gaaccgctga cggccaatgg
     1501 ggcatcgtca tcggtgcgat gaacggtcac gtcctgtgga gcgtgaaccc ggagctcgag
     1561 ctgattccgg catcgaccgc caagctcttc accgtgggct tcacgcggct gcgcgccggc
     1621 ggtggcgctc gcatttctac tcgggtgatc ggccggggta ctctggatac cacgagtggt
     1681 cgctggttgg gaggatggca gctcgagctc ggcggggatc ccacgctgga gcgtcccggc
     1741 cgagccgggc caaccctgag agagctcgca cgccaactcc gagatcgggg gattcgcacc
     1801 cttcaaggag ccatgacact caccagtcgg acggggccgg caacgtcccg ctatcctgcc
     1861 gtctggtctg ccgagttcat cggacagctc tacgccccac cggttggacc ggtgacgctt
     1921 cacgaaaaca cggtctcgct caccttccgg ccgggtcagg acgttggatc acccccgaca
     1981 ctggtgtccg ccgtgccggc gggagtcgag cgtctggttc gaatggcggc aacaactgtc
     2041 ggtggaaccc gcaggcggct cagcctcacg gcggatgccg atggtggttg gaccctaagc
     2101 ggcacgatcg ggctctatgc ccggccggcg ggtctatctg cggtggcgca cgagccgacc
     2161 agtgtgttgg cgtacgcgtg ggccgcggcc ctgaaccggg ccggcatcga ctgggtggac
     2221 cgcacatcac cggctccggc tgttccgggg ctcccgacgg tgctcgcaaa ggtggaatcg
     2281 gaacccctcg acagtgtggc gctcgagatc aaccggcgca gtctcaatat tggagccgag
     2341 ttgatcttgc agtgggccgc tgccagccaa acggccggcc cgggactggt gacagatcat
     2401 gttcgcgatg tggttggtcc tcgcgcccaa atccgtatgg ttgacggaag cgggctgagc
     2461 gagttggacc gggtcagtcc catgacccag atgctgtatc tggctcgcta tcctcagcaa
     2521 cggggcgcag agcggttccc cctgctcctg cctgccaacg gcgtcgggac cctgcgaggg
     2581 ctgcgctacg gcatgggcag gggagtggtc catgccaaga ccggtaccct cgatcaggtc
     2641 gctacactag ccggctatct tggcaggcct gatggagttc tggtgatctc cctgatgtac
     2701 aacggacgcc gcacccatgc cgcacgtgca gcagaatggg agctattccg gctgctggga
     2761 gccgagggcg tcaatctgag tggagccttg gatacccata tgggaggcgg gactaatcag
     2821 gacgaggaga gctccgatac cctggtcgag cgctagagcg ccgggcggcc cagctgttgc
     2881 ggtgagcacc agaatctgac tgccactggt ggtacggtcg ggtaaagcgc attatctctc
     2941 gcgcccgacc tgcggcattg ccgcagcaac tgattactcc ggagtaggta tggattcaac
     3001 ggttcgccac gccagactca aacccgagtt tgccgagttg tatccacccc tcaaagccga
     3061 tatctgggaa cccgctgccg aaatgggagc ccgggtctta ttgtggcagc tgcagcagca
     3121 aggaacagcg gcgttgggca cgaggctgtt ggacgagcgg cacttcgagt tccgaggcgg
     3181 atggtgccga ggcagcgaga ccgatctccg aacccgggtg tgtgatcccg cgttcaatgg
     3241 accggtgtga gacaatcagg agagtcgatc ttagtactgt tcgat
//
LOCUS       DASRPQ010000529         1971 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1001447, whole genome shotgun sequence.
ACCESSION   DASRPQ010000529 DASRPQ010000000
VERSION     DASRPQ010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1971
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1001447"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(92..532)
                     /locus_tag="VFD73_06310"
     CDS             complement(92..532)
                     /locus_tag="VFD73_06310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73630.1"
                     /translation="MSDKGDDVTGDIRWLTYREIGEIRGISTASATRLVIRRKWRRQA
                     GNDGTVRVAVPAEEAQRRGDKPRDSHGNISRTIRALETAVSTLGKQLDAERGRADKAE
                     AALASEREARVRAEADAAQLHQQDQARRSAGLVERIITALRPPR"
     gene            1060..1707
                     /locus_tag="VFD73_06315"
     CDS             1060..1707
                     /locus_tag="VFD73_06315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73631.1"
                     /translation="MTRDEILTRYRRLREVSKQHHAAVLDVIAPHVVMDYAKRLGLTR
                     GKVVVLDRTEDMTLAFDLAIYLAKPGRSHPLDRYAGAAQFRPGSDEATVLEAMRHARF
                     SIWRVERLHETAGLVLRDLLRQEETWLVDEAMENNPPLGGAFAGRLFTPESFAMTTGV
                     LVPVTQSLMKEVFDKTPALQHATANAIARDPRFATAIYRAGLARGATGSVRYEYT"
     gene            complement(1733..>1971)
                     /locus_tag="VFD73_06320"
     CDS             complement(1733..>1971)
                     /locus_tag="VFD73_06320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73632.1"
                     /translation="RVIGIPGRELMAVRRDGSEFPIDLSVSSFASSGGRRLIRIPGND
                     DGSSYLQTEVDGRVRRSEKRHAFSGTVLHNVGQA"
BASE COUNT          359 a          655 c          573 g          384 t
ORIGIN      
        1 aagcagcgca gtcgggaagt cgcggtcaat cagcaactat ccaggattac agcgatctgg
       61 cacggcatcg aagttgtgaa agcgtgacac ctcaccgtgg cggccggagc gcggtgatga
      121 tccgctccac cagcccggcc gatcggcggg cctgatcctg ttggtggagc tgtgcggcat
      181 cggcctcggc ccttaccctg gcctctcgct cgctcgccaa tgctgcctcg gccttgtcgg
      241 ctcgccctct ctcggcatcc agttgcttgc ccagggtgga aaccgccgtc tccaacgccc
      301 tgattgtgcg gctgatattg ccatggctgt cacggggctt gtcaccccga cgctgcgcct
      361 cctcggccgg aactgccact ctgacagtac cgtcattgcc ggcctgacgt cgccacttcc
      421 gtctgatgac aagccgggtg gccgaggcag tgctgatccc gcgaatttcc ccgatttctc
      481 tataggttag ccagcggatg tcacccgtga catcatcccc cttgtcgctc atgacatccc
      541 tgttccacta cccctgacat gttacactga cagcatcgat ccgggaaagg catgtcatgt
      601 tgcgcaatgt cactcctgac agtggcgtta cagcataacg ggccggctaa tttcgtcaga
      661 tgacgggaaa taggtggcag gctgttatac gtaactgtag ccgcccgcaa tcatccgcgg
      721 gtctgctcgc aatcatcgcg tttttctgcc cgaattgggt gagactagcg gcggcgccaa
      781 acccaccata gctgcaactg tgcccacatt gcgtgagacg gacccgcaat cggcgcgatc
      841 tgcccacggt ggtgagacgg atgcgtccgt agttgtagcg gcctgcaatc atcggcggct
      901 cggcctgatt tcatcggtga ttccggccca gattttgtga gactagtttt tccgaaaagc
      961 cacaagcggt cctgtcgcct tgtctcggca agcggtcctg cctcgcctac tcttccgacg
     1021 acaccccacg accgctgagt cgcatccagg ccgaaagcaa tgacccgaga cgagatccta
     1081 acccgctacc gccgcctgcg tgaggtcagc aagcagcacc acgccgctgt cctggacgtt
     1141 atcgcccccc acgtggtgat ggactacgcg aaacggctcg gcctgacgcg gggcaaggtc
     1201 gtggtgctcg accgcaccga ggacatgacg ctggccttcg accttgccat ctacctggcc
     1261 aagccgggcc gctcacaccc gctcgaccgc tatgccgggg cggcacagtt ccgcccggga
     1321 tcggacgagg cgaccgtgct cgaggccatg cgccacgccc gtttctccat ctggcgggtc
     1381 gagcgcctgc acgagaccgc gggactggtc ctgcgggact tgctgcgtca ggaggaaacc
     1441 tggctggtgg acgaagccat ggagaacaat ccgccgctgg gcggagcctt cgccgggcgc
     1501 ctgttcaccc cggagagctt cgccatgacc accggcgtcc tcgtgccggt cacccagagc
     1561 ttgatgaagg aggtcttcga taagacccct gccttgcaac acgccacggc aaacgccatc
     1621 gcccgggatc cgcgcttcgc caccgccatc tatcgggccg gtcttgcccg gggcgcgacg
     1681 ggatcggtcc gttacgaata cacatagatg tagcggtagc ggcctgcgat catcaggctt
     1741 ggcccacgtt atgtaatacg gttcccgaga aagcatgacg cttttctgac cgcctgaccc
     1801 ggccatccac ctcggtttgc aggtaactgg aaccgtcatc atttcccggg atccgtatga
     1861 gacggcgtcc gccactactg gcgaatgagc tcactgacag gtcgattggg aattctgaac
     1921 cgtcgcggcg aaccgccatc aactcgcggc ctggaatacc aatgacccgc g
//
LOCUS       DASRPQ010000530         1426 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3826037, whole genome shotgun sequence.
ACCESSION   DASRPQ010000530 DASRPQ010000000
VERSION     DASRPQ010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1426
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3826037"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            233..436
                     /locus_tag="VFD73_06325"
     CDS             233..436
                     /locus_tag="VFD73_06325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73633.1"
                     /translation="MATKLDKTIKRELELDGKLYTVAISPEGVKVTPKGARKGHEISW
                     STIVGGDAELRRDLNLSVDAYRQ"
     gene            464..811
                     /locus_tag="VFD73_06330"
     CDS             464..811
                     /locus_tag="VFD73_06330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73634.1"
                     /translation="MAEPSFGEQISTLNTTLRAIEVRLALGRAPVEGLEDFKSALDDM
                     RLRLWGLLGATVGEKGFQERFRIRRATEMCRGLGGDLRSGAVSGRHAELTALREAAGE
                     LGSSIEQAQQHAF"
     gene            815..1357
                     /locus_tag="VFD73_06335"
     CDS             815..1357
                     /locus_tag="VFD73_06335"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI73635.1"
                     /translation="MSAPPALRTARLVLDGFAQSDAPELQRLAGAREIAATTLAIPHP
                     YLLEHAQSWIDKQNSGTLEKSVNFAIRLAPTNTLIGSVGLKEIDRTRAQAELGFWIGV
                     PWWGQGYAREAARSVIQYGFETLELNRIYAHHMTRNPASGRALSAAGMRREGLLPKGV
                     LKWGIEEDVVLYAVMRDDWI"
BASE COUNT          277 a          403 c          500 g          246 t
ORIGIN      
        1 tgcctggctt gagaccgggg tagaatttgg caaactcccg cttgaggcgg gcctcgcgct
       61 cattgggcat ctcaggctgc gctgatgggg ttataggaaa gctaggaagc cggccggggg
      121 gcgcaactcg acgccggtgc cacaaattgc gtatacttgg cggggttgta acctgacgcg
      181 gtggtataca agcacttatg cgcaataacg cctctccaac tggtgagcac ccatggcaac
      241 gaaactggac aagacgatca agcgagagct ggagctggac ggcaagttgt acacggtcgc
      301 gatctcgccc gagggagtga aggtcactcc aaagggagcc cggaagggtc acgagatctc
      361 ctggagcacc atcgtgggcg gcgatgcgga gctgcgacgc gatctcaacc tgtcggtcga
      421 cgcctatcgg cagtagcgcc gtggccgggg cgtgggagga ttcatggcgg agccgagctt
      481 tggggagcag atcagcacac tgaataccac actgcgggcc atcgaagtcc gcctggcgct
      541 gggacgtgct ccagtggaag ggctcgagga cttcaagagc gcactcgacg acatgcgcct
      601 gaggctctgg ggattgctcg gcgctactgt tggcgagaag gggtttcagg agcggttccg
      661 aatccgccgg gccaccgaga tgtgccgggg gctgggcggg gaccttcgct ctggcgcggt
      721 gagtggacgg cacgcggagc tgacggcact tcgtgaggca gccggcgaac tggggtcgag
      781 tatcgagcag gcgcagcagc acgccttcta agcagtgagc gccccgcctg ccctgcgcac
      841 cgctcgtctg gtgctggacg gctttgcgca gagcgacgct ccggagctgc agcggcttgc
      901 cggagcccgg gagatcgccg caaccacgct ggcgattccg catccttatc tattagagca
      961 cgcccagtct tggatcgaca agcagaactc gggcacactc gagaagtcgg tgaacttcgc
     1021 gatccgcctg gcgccaacca acacactcat cggctcggtg ggcttgaagg aaatcgaccg
     1081 cacgcgcgcc caggccgagc tgggtttctg gattggagtt ccctggtggg gtcagggata
     1141 cgctcgagag gcggcgcgca gcgtgatcca gtacgggttc gagaccttgg agctcaatcg
     1201 gatctatgcc catcacatga cgcggaatcc ggcatcggga cgagctctct cggccgcggg
     1261 catgcgacga gagggcctgt taccgaaagg cgtgctcaag tggggcatag aggaggatgt
     1321 ggtgctctat gcggtgatgc gtgacgactg gatttaagtg gtgagcgccc agcctcgcac
     1381 caccagtgcc agaggcacag caggggtgcg cagtctcgtc atcatc
//
LOCUS       DASRPQ010000531         2966 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2580935, whole genome shotgun sequence.
ACCESSION   DASRPQ010000531 DASRPQ010000000
VERSION     DASRPQ010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2966
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2580935"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..616
                     /locus_tag="VFD73_06340"
     CDS             <1..616
                     /locus_tag="VFD73_06340"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HZI73636.1"
                     /translation="RDGVPFGNAVAAVIVSRVVEAAALVGIVGVAALSLAPDHRARLA
                     GAAVLILVAGFSAWWSRAPREHFEARLAKTWRTGFKDLLGRMRPAIPSAVGCAMVSWL
                     GQWLTYYWSLRATHVDVTLTAGLAAVLVANFAGVLRLTPGNVGIMQASLIVGMRGFGI
                     RPGEALAGGLALQAIQVLPVLAIATALVGQRGLRRITQRRSEVV"
     gene            616..2166
                     /locus_tag="VFD73_06345"
     CDS             616..2166
                     /locus_tag="VFD73_06345"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI73637.1"
                     /translation="MAASTEPRTVARTRSVSPVFYDPPVELEPEADSTPPRMGLARRL
                     AFLTAIMAVLLVLGATEIALSWSARTRLEDFRLESVALANTLASLLMREAPTGNPESL
                     AQGVAGWSRHRLTESQATVYVVHRGVLSPAASSGGPAGAADQTAYRALNRHTTEVHLL
                     GGADPGWQVLVPLGVTHPYGVLDVRVSTRRLQDWARVERQRAYLLACISALLVALGVA
                     VLTARWVGRPLAEIGRAMAGAHRGAQGAPAAPEIGPAEFKELARQYNRLRNALAFREQ
                     ESAARAMLLSLEERARGFDRLALLQEAATGFAHEIGTPLNTLSGHLQLLRDDFAVQEN
                     QRAVDRVRMLLTQVDRVAGIVRAALERGSWPRPYVQNADLTEIATRMLRFLEPAFTDA
                     GVTAELTSRATVTAACDPGMVEQILLNLLKNAIEALSPGNSVQITTCMDETEACIEVS
                     DDGPGLDPDAESTLFQPFSTTKGTQGTGLGLAVSRRLARTLGGDLLYLPSRRGARWRL
                     TLPAGVAA"
     gene            2163..>2966
                     /locus_tag="VFD73_06350"
     CDS             2163..>2966
                     /locus_tag="VFD73_06350"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HZI73638.1"
                     /translation="MTAVDTTPGTARLLLVDDDEAACRLLSEVLERDAYRVVSALSAD
                     EAIAKLEDEGPFDAVLTDLRMPQKSGLDLLRFLRNRDPDALVLVLTAFGDAAAAAEAI
                     RAGAYDFISKPYDISRLRETLGRALVRQRLAKRPPGSTVSSGTEVGDSLALVGHSPAI
                     IDVMKTVARVAASQATVLVLGETGTGKELVARTVHRYSDRASRRFVTVNCSALAEGLL
                     ESELFGHVRGAFTGAANSRPGLFREADKGTLFLDEIGDISPGLQARLLRV"
BASE COUNT          473 a          938 c         1016 g          539 t
ORIGIN      
        1 acgcgacggc gtgcccttcg gcaacgcggt ggcggctgtc atcgtgagcc gggtggtcga
       61 ggcagcggcg ttggtgggaa tcgtgggagt cgcagcactc tcgctggctc cggatcacag
      121 agcgcggctc gcgggagcag ccgtgctcat cctggttgcc gggttttcgg cttggtggag
      181 tcgcgctcca agagagcact tcgaggctcg actcgcgaag acctggcgga ccgggttcaa
      241 ggacctgctc ggcaggatgc gcccggccat tccctcggcc gtcggctgtg ccatggtcag
      301 ctggctcggc cagtggctga cctattactg gagtctcaga gcgacgcacg tggatgttac
      361 gctgaccgcg ggactggccg cagtgctggt cgccaacttc gccggggtgt tacgcctgac
      421 gcctggtaac gtcgggatca tgcaggcctc cctcatcgtt ggcatgcgcg gtttcggcat
      481 acggcccggc gaggccttgg ccggtggttt ggcgcttcag gcaattcagg ttcttccggt
      541 gctggcgatc gccaccgcgc tggttggcca gcgagggctg cgccggatca cccagcggcg
      601 atcggaggtc gtgtgatggc ggcatccacc gagcctcgga cggtggcgag gacgcgcagc
      661 gtgtctccgg ttttctatga tccgccggtg gagttggagc ccgaggccga ttccactcca
      721 ccccggatgg gactggctcg ccggttagcc tttctcaccg cgatcatggc agtcctgctg
      781 gtgctcggcg ccaccgagat cgcgctctcg tggtctgccc ggacccggct ggaagacttc
      841 cggctggagt cggtggcgct ggccaatacg ctggcctcgc ttctcatgcg ggaagccccg
      901 accggcaatc cggaaagtct ggcgcaaggg gtggccgggt ggtctcgcca tcggctcact
      961 gaatcccagg ccacggtgta cgtagtccat cggggggtgc tctcgcccgc cgcttccagt
     1021 ggtggtcctg ccggcgccgc agaccagaca gcctaccgag cgctcaaccg ccacaccacg
     1081 gaggtgcatc tcctcggcgg cgccgacccg ggctggcagg ttctcgtccc gctgggcgtg
     1141 acgcacccat acggagtact cgacgtcagg gtctcaacgc ggcggctgca ggattgggcc
     1201 cgagtggaac gccagcgcgc gtatctcctc gcctgcattt ccgcgctcct cgtggcactc
     1261 ggcgttgccg tcctcaccgc gcgctgggtc gggcggcctc tcgcggaaat cggaagggca
     1321 atggctggcg cgcaccgggg tgcgcaaggg gcgcccgcgg ccccggagat cgggccggcc
     1381 gagttcaagg agctggcccg gcaatacaat cgtctgcgca acgcgctggc ctttcgcgag
     1441 caggagagtg ccgctcgggc aatgctgctc tcgctggagg aacgcgcccg cggcttcgac
     1501 cgcctggctc tcttacagga ggcggccacc gggtttgccc atgaaatcgg gactccgctg
     1561 aacaccctga gcggtcacct tcaattgctg cgtgacgatt tcgcagtcca ggaaaatcaa
     1621 cgcgcggtgg atcgggtacg gatgctgctg acccaggtcg accgggtggc cggtatcgtg
     1681 cgagccgctt tggagagagg aagctggccg agaccttacg tgcagaacgc ggatctgact
     1741 gagatcgcca ctcgaatgct tcgcttcctg gagcccgcct tcaccgacgc gggagtgacc
     1801 gcggagctca catcgagagc gacagtgacc gcggcgtgtg atccgggaat ggtcgaacag
     1861 attctgctca atctgctgaa gaatgccatc gaggcgctgt cgcccggtaa ctcggttcag
     1921 atcaccacgt gcatggatga aaccgaggca tgcatcgagg tctcggacga tggcccggga
     1981 cttgatcccg atgccgagtc gacgctcttt cagccgttct ccacaaccaa gggaactcag
     2041 ggtaccggcc tggggttggc agtcagccga cgattggcgc gcacactcgg aggagatctg
     2101 ctgtacctcc cgagccgccg aggagcgcgc tggcggctga cgctgccggc aggagtcgcc
     2161 gcatgaccgc tgtggacacc acaccaggca ccgctcggct gcttctcgtc gacgacgatg
     2221 aggcagcctg ccgcttactg tccgaggttc tggaacggga cgcgtaccgg gtggtctctg
     2281 ccttgtccgc cgatgaggcg atcgcaaagc tggaagacga aggaccgttc gatgccgtgc
     2341 tgaccgatct caggatgccg cagaaaagtg gactcgatct cctgcgcttc ttgcgaaatc
     2401 gggaccctga tgcgctggtc ctggtgctga ccgcgttcgg cgatgcagct gctgccgcag
     2461 aggcaatccg agccggcgcg tatgacttca tcagcaagcc ctacgacatc tcgcggcttc
     2521 gagagaccct gggcagagcg ctggtccgcc agcgcctggc aaaacggccg cccgggtcaa
     2581 ccgtgtcttc cggcactgag gttggcgata gtctggcact ggtgggacac agcccagcga
     2641 tcatcgatgt gatgaagacg gtcgcccggg tggccgcttc tcaggccacc gtcctggtcc
     2701 tgggagaaac cggaaccggc aaggagttgg tagcacgcac ggttcatcgc tactccgacc
     2761 gcgccagccg gcgattcgtc acggtcaact gttccgccct ggccgagggt cttctggaaa
     2821 gcgagctgtt tggacacgta aggggcgcct ttaccggtgc ggcgaattcg cgcccggggc
     2881 tattccgtga ggctgacaag ggcacgctgt tcctggacga gatcggggat atctcgccgg
     2941 gcctgcaggc ccgtctgctg cgagtg
//
LOCUS       DASRPQ010000532         3086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_377696, whole genome shotgun sequence.
ACCESSION   DASRPQ010000532 DASRPQ010000000
VERSION     DASRPQ010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3086
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_377696"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..892)
                     /gene="recA"
                     /locus_tag="VFD73_06355"
     CDS             complement(<1..892)
                     /gene="recA"
                     /locus_tag="VFD73_06355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HZI73639.1"
                     /translation="MAAAHDESRLEADRRKALGLAISQIEKQLGKGAIMRMGADTPRV
                     KVAAIPTGAINLDAATGVGGIPRGRITEIYGPESSGKTTLTLHLAANVQKMGGVAAYV
                     DAEHALDIEYAKKLGVDIENLLVSQPDTGEQALEIVEILVRSGAVDLVVIDSVAALVP
                     KAEIEGEMGDSHVGLQARLMSQALRKLAGAINRSNCAVVFINQLREKIGVMFGNPETT
                     TGGKALKFYASLRLDIRRIGPVKEREAVIGNHVRVKVVKNKVAPPFRQAEFDVMFDEG
                     ISHTSLLVDLASEAGIIQKSG"
     gene            complement(1005..1424)
                     /locus_tag="VFD73_06360"
     CDS             complement(1005..1424)
                     /locus_tag="VFD73_06360"
                     /inference="COORDINATES: protein motif:HMM:NF014119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HZI73640.1"
                     /translation="MSSSRRFIPVAEWEDKRQILGIEGERTALAYLTSCGWSLEAHRF
                     KLGRHDVDLVVRRGKTVAFVEVKTRRGNVCGSALEAVNRRKQRDIARVASVWVLRHGR
                     PGEQYRFDLLVVQDPGRAGQVIEYVEDAWRPVGQWSY"
     gene            1628..>3086
                     /locus_tag="VFD73_06365"
     CDS             1628..>3086
                     /locus_tag="VFD73_06365"
                     /inference="COORDINATES: protein motif:HMM:TIGR00813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter family protein"
                     /protein_id="HZI73641.1"
                     /translation="MRTEALAGVDYAILAVYFVFVIAVGWLVRRSVRTSKDFFEAGRR
                     TPAWVAGLAFVSANLGAQEVIGMGASGAKYGIATAHFYWVGAIPAMVFVALFMMPFYY
                     GSRARSVPEYLRLRFDEKTRAFNACSFAVMTVFSSGVSMYAMGKLFNLLLGWDMDASM
                     LAAAAVVLAYTTLGGLTSAIYNEVLQFCLIVAGLLPLVVLGLRDVGGWAGLTARLSHA
                     AVAKGYPAGAYTEAWRHLGNPQQNPVGVEWLGLVMGLGFVLSFGYWCTDFLVVQRAMA
                     ADSITAARRTPLIAALPKMLFPALVILPGMIAFALTATGGPSLIPAKLGAALQPLMDA
                     QGRPVLDYDLATPSMLLHYFPNGMLGLGLSALLASFMSGMAGNVTAFNTVWTYDIYQS
                     YIRPRASDAHYLWVGRAATVGGVLLSIGAAYVARSFNNIMDVLQLVFAFVNAPLFATF
                     ALGMFWRRTTGHGAFVGLVSGTLAAAIHHGLTLPAG"
BASE COUNT          521 a          973 c          958 g          634 t
ORIGIN      
        1 cgcccgactt ctggatgatg ccggcttccg atgccagatc caccagcagc gaggtatggc
       61 tgatgccttc gtcgaacatc acatcgaact ccgcctggcg gaacggcgga gcaaccttgt
      121 tcttgacgac cttgacccga acatgattgc cgatcaccgc ctcccgttcc ttgacggggc
      181 cgatgcggcg aatgtcgagc cgaagcgagg cgtagaactt gagcgccttg cccccggtgg
      241 tcgtctcggg gttgccgaac atgacgccga tcttttcccg gagctgattg atgaaaacga
      301 cggcgcagtt cgaccgattg atggcgccgg ccaacttcct gagcgcctgg ctcatcaacc
      361 gggcctgaag gccgacgtgg ctatcgccca tttctccctc gatctccgcc ttagggacca
      421 gagcggccac cgagtcgatg accaccaggt ccacggcgcc ggagcgaacc agaatctcca
      481 cgatttcgag cgcctgctcg ccggtgtcgg gctgcgagac cagaagattt tcgatgtcga
      541 cgccgagctt cttggcatac tcgatatcga gggcgtgctc ggcgtccacg tatgcggcga
      601 cgccgcccat cttctggacg ttggccgcga ggtgaagcgt gagggtggtc ttgccggagg
      661 attcggggcc atagatctcg gtgatccggc ctcgaggaat accgccgact cccgtggccg
      721 cgtcgagatt gatggcaccg gtgggaatgg cggccacctt aacccgcggg gtatcggcgc
      781 ccatccgcat gatggctccc ttgcccagtt gcttctcgat ctgggagata gccaacccga
      841 gggctttgcg acgatcggct tcgagccggc tctcatcgtg agcagcagcc attagtgtcc
      901 tcaaggaaaa aagtgactga ttttgcagca gatataatct ggaccccaag ctaataccga
      961 agactaaccg aagcaagagt atgattgtga ccgaatttac gacactagta gctccactgc
     1021 cccacgggac gccaagcgtc ttcgacatac tcaatcacct gacccgctcg accggggtcc
     1081 tgcacaacca gcagatcgaa ccgatactgc tcgcccggac gcccgtgccg cagcacccag
     1141 acactggcca cgcgcgcgat gtctctttgc ttgcgccgat tcaccgcctc gagtgcgctg
     1201 ccgcatacgt tgccccgacg cgttttgacc tccacaaacg caacggtctt cccccgccgc
     1261 accaccaggt cgacatcgtg acggcccagc ttgaagcggt gcgcctcgag cgaccagccg
     1321 caagatgtga ggtaggcaag agcggtgcgc tcgccctcga tgccaaggat ctggcgcttg
     1381 tcctcccact cggcaacggg aatgaaccgg cgactggatg acatacccca tggtaacgcg
     1441 atcaggcagc cgtgagacat cggctctctg cgagacggcg cgggaaagcg cattgtccgc
     1501 accctgccga agccacctat gcgaggtatc ttgcggggcc gccgctcgag aggttgccaa
     1561 gtgacgatca tgtgttggac cagaggagct gacacagcag agcccgccat aactcggagt
     1621 gtgaggcgtg agaactgagg cgcttgccgg cgtagactac gccatcctcg cggtctactt
     1681 cgtctttgtg atcgcggtgg gctggctggt gcgccgctcg gtgcggacca gcaaggactt
     1741 ctttgaggcg ggtcggcgga ccccggcctg ggttgccggc ctggccttcg tctcggcgaa
     1801 cctcggcgcc caggaggtca tcggcatggg ggcgtcgggg gctaaatacg gcattgccac
     1861 cgcgcacttc tactgggtcg gtgccatccc ggcgatggtg tttgtggccc tgttcatgat
     1921 gccgttctat tacggctcac gggcccggag cgtgccggag tatctgcggc tccgcttcga
     1981 tgagaagacc cgtgcgttca acgcctgctc cttcgcggtg atgacggtgt tctcttccgg
     2041 cgtctccatg tatgccatgg ggaagctctt caacctgctg ctcggctggg acatggatgc
     2101 cagcatgctg gccgcggcag ctgtggtgct cgcctatacc accctggggg gactcaccag
     2161 cgcgatttac aacgaggtgc tgcagttctg tcttatcgtg gccggtctgc tgccgctggt
     2221 ggttttgggc ctccgtgatg tcggaggctg ggccggcctg accgcccgat tgtctcacgc
     2281 cgcagtagcc aagggctacc cggcaggagc gtataccgag gcctggagac atttgggcaa
     2341 tccgcagcag aacccggtcg gcgtcgagtg gctcgggctg gtgatgggac tggggttcgt
     2401 gctctcattt ggttactggt gtaccgactt cctcgtggtg caacgagcga tggctgctga
     2461 ttccatcacc gcggctcgtc gcacgccgct gattgccgcc ctgccgaaga tgctctttcc
     2521 cgctttggtc attctccctg ggatgatcgc ctttgcgctg accgcgaccg gcgggccatc
     2581 gctcataccc gctaagctgg gtgcggcgct gcagccactg atggatgccc agggccgtcc
     2641 ggtgctcgat tacgatctgg caaccccgtc catgctgctg cattacttcc ccaacggcat
     2701 gctcgggctg ggactgtcag ccctgttggc ttcgttcatg tcgggaatgg ccggcaacgt
     2761 cacggcgttc aacacggtgt ggacctacga catctatcag agctacatca ggccccgcgc
     2821 ctccgacgcc cactatctct gggttggtcg cgcagcaacg gtcggtggtg ttctgctgtc
     2881 gatcggggct gcctacgtgg cacgatcgtt caataacatc atggatgtgc tgcagctggt
     2941 cttcgctttt gtgaacgctc cgctcttcgc cacgttcgca ttggggatgt tctggcgccg
     3001 caccaccggc cacggggcct ttgtcggtct ggtctcaggg acgctggccg ctgctatcca
     3061 ccacggcttg acgctgccgg cggggg
//
LOCUS       DASRPQ010000533         1297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_689262, whole genome shotgun sequence.
ACCESSION   DASRPQ010000533 DASRPQ010000000
VERSION     DASRPQ010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_689262"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1297
                     /locus_tag="VFD73_06370"
     CDS             <1..>1297
                     /locus_tag="VFD73_06370"
                     /inference="COORDINATES: protein motif:HMM:NF020037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HZI73642.1"
                     /translation="DLAVVSVQDTTDEIQTRQRLESSQTEQKQLVEGLSEANRRLNDL
                     NKELQDANEELQASNEEMMLTQEELQATNEEFEATNEELQATNEELETNNEELQATNE
                     ELETTNEELQARTSELMEVTRNVVAERTRLIDMVELAPFHILLLQGPDLRIEAFNPRY
                     ARLLGAREVVGRPLDEIFADPEQAELVSLAHEVYRQNIGRTTPRMPVNMTNEQGQRVQ
                     RYFVYTIVPTHEAGGKVDGAVVYAEDVSAQMAEEATERRENLKLMVEHADQVALALFD
                     VPTTRLLQASPRYLDIVERGAGFTRDEIIGRTWQELAFFSSTPNEATTLFQSVLAGAE
                     SRRLLGIRVRLGQEAQETVWDCSLIPIRFGTSDAEAPMQFMAVSAVEVTQPTRALQQL
                     EEVDRLKDEFMSLASHELRTPLVPLRGYADLLTRLIRKQE"
BASE COUNT          278 a          389 c          424 g          206 t
ORIGIN      
        1 gatctggccg tcgtcagcgt gcaggacacc accgacgaga tccagacccg ccagcgcctg
       61 gagtccagcc agaccgagca aaagcaactg gtcgaagggc tgagcgaggc gaaccgccgc
      121 ctgaacgacc tgaacaaaga gctacaggat gcgaacgagg aattgcaggc ctcgaacgaa
      181 gagatgatgc tcacgcagga agagttgcag gccaccaacg aggagtttga ggccaccaac
      241 gaggaattgc aggccaccaa cgaggagttg gagaccaata acgaggagtt gcaggccacc
      301 aacgaggagt tggagacgac caacgaggaa ttgcaggccc gcaccagtga acttatggaa
      361 gtgacccgta acgtggtggc cgagcggaca cggctgatcg atatggtcga actggcgccc
      421 ttccacatcc tgttgctgca aggccctgac ttgcggattg aagccttcaa tccgcgctac
      481 gcgcggctac tgggcgctcg cgaggtggtg ggtcgccccc tggacgagat ttttgccgat
      541 cctgagcaag cggaactggt gtccctggcg cacgaggtat accggcagaa tatcggacgc
      601 acgacaccgc gcatgccggt caacatgacc aacgagcaag gccagcgggt gcagcgctac
      661 ttcgtctaca ccattgtgcc cacgcatgag gccggcggca aagtggacgg cgcggtggtg
      721 tacgctgagg atgtctctgc gcaaatggcg gaggaagcca ccgagcggcg cgagaatctg
      781 aagctgatgg tggagcatgc cgatcaggta gccctggccc tcttcgacgt gcccacgacc
      841 cgcctgttgc aggccagccc gcgctacctg gacattgtcg aacggggcgc gggttttacg
      901 cgggatgaaa ttatcggtcg cacctggcag gaactagcct tcttcagcag taccccgaac
      961 gaggccacga cgctgttcca gtcggtgctg gccggcgcgg agtcgcgccg gctgctggga
     1021 atccgggtgc gcctggggca ggaggcgcag gaaacggtct gggattgtag cctgatcccc
     1081 atccgctttg gcacctcgga tgccgaggcg ccgatgcagt ttatggccgt ctccgccgtc
     1141 gaagtcaccc aaccgacccg cgcgctccag caactggaag aggtggatcg cctcaaggac
     1201 gagtttatgt cgctggcgag ccacgagttg cgcaccccgc tcgtgccgtt gcgcggttac
     1261 gccgacctgc tcacccgcct gatccgcaag caggaga
//
LOCUS       DASRPQ010000534         1377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_689341, whole genome shotgun sequence.
ACCESSION   DASRPQ010000534 DASRPQ010000000
VERSION     DASRPQ010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1377
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_689341"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            898..1365
                     /locus_tag="VFD73_06375"
     CDS             898..1365
                     /locus_tag="VFD73_06375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HZI73643.1"
                     /translation="MAEITVTVDGVKYADHVEPRMLLVHYLREVVGKTGTPIGCDTSN
                     CGACTVLLDGESVKSCSVLAVQADGAEITTIQGLANGGLHPLQRAFHEEHALQCGYCT
                     PGMIMAASDLLRENPQPSDEEIREGLEGNLCRCTGYENIVRAVRRAAQAGVSE"
BASE COUNT          251 a          417 c          477 g          232 t
ORIGIN      
        1 tgaagggccc ggcctgcggg ccaggacgga agcgtcgctc cctccctccg cattgtggta
       61 taatcgaaag cgtcttcgat agccaagcag gcaaattcac gatccggcgc gaatccgcgg
      121 cagggcatgc cgtggctgcg cggagaggcg acggggctgc ccggcccgcg aaccgcgaac
      181 tgacagcgcg gtgcgagccg cggccgaaat cccccgcctc aaggcgggtg gaggatgtca
      241 agatgccgcc tctttcccgg gggccgctgg aggtagtcca ccggtggaac ggcttagacg
      301 cgtgcacggt tcaaagacct ggccgtgacc cgcgggtcac ggccaggctg ccagccgagg
      361 ctctctccgg caggtcaggg ggggcggacc tgcggcgctg ctcacggctg agcggtgagg
      421 cagaggaggg cctggcatgg tgccgatctc ccctggccct acgtaaggga atacgtgccg
      481 aacggtccgg cggttcagtc cttgttcatc tagttccgct ggcgaggccg gcgcccggac
      541 cgggtgcagc ggaccgggcc caaatgacca ttcacctggt agccgcgttc ctaagcggct
      601 ccgcgctacc tgaagcaggc aaatagtgct ttactcgggc aagcatcgtt tgcctgcgat
      661 gggtgatagc gctggaacag ttgcctgaga atatggcaat tgacacttta cagtagcaat
      721 tacagcttgc ggagcgtcgg ctcgattagc ggccctgttt cccggctgga atgcgctgag
      781 caggccgttg tttcgcgtgc ctcaaatccg gaccctggtg ggtactggtg cttaggggcc
      841 tggtagtcct aggtttgcac caggaaataa atcctgctcg ccaggggagg agatcgcatg
      901 gcagaaatca ccgtcaccgt cgatggcgtg aagtatgcgg accacgtaga gccccggatg
      961 ctgctcgtcc attacctcag ggaagtggtg ggcaagacgg ggactcccat cggatgcgac
     1021 acgtcgaatt gcggcgcatg cacggtgctg cttgacgggg agtcggttaa gagctgttcc
     1081 gtcctggccg tccaggcgga cggcgccgaa atcaccacga tccagggcct ggcgaacggt
     1141 ggcctgcatc cgctccagcg cgctttccac gaggagcacg cgctgcaatg cgggtactgc
     1201 accccgggga tgatcatggc ggcgtcggac ctgctcaggg agaatccgca gcccagcgac
     1261 gaggagatcc gcgagggcct cgagggcaat ctgtgccgct gcaccggcta cgagaacatc
     1321 gtccgcgccg tgcggcgcgc cgcccaggcg ggagtaagcg aatgaccgcg cagaccg
//
LOCUS       DASRPQ010000535         2980 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3204423, whole genome shotgun sequence.
ACCESSION   DASRPQ010000535 DASRPQ010000000
VERSION     DASRPQ010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2980
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3204423"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..442
                     /locus_tag="VFD73_06380"
     CDS             <1..442
                     /locus_tag="VFD73_06380"
                     /inference="COORDINATES: protein motif:HMM:NF012779.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HRDC domain-containing protein"
                     /protein_id="HZI73644.1"
                     /translation="FRILSNEPMLFMANSPPQNLNALGEIRGIGREQLERRGQEIMAA
                     IERGLAVPESELPRLPRPLRKQPDPAYETRLERLKAARNDLAERYQLAPGVLCPNGTL
                     EALARVDPSTLEQLAKIRELRQWQLREFGGTLLQALKQPSSHQE"
     gene            complement(444..776)
                     /locus_tag="VFD73_06385"
     CDS             complement(444..776)
                     /locus_tag="VFD73_06385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sulfur cluster assembly factor"
                     /protein_id="HZI73645.1"
                     /translation="MSSSAETPSPPVPTSDAIRKALRAVKDPELNLNIIDIGLVYEAE
                     SDQAGNVRVEMTLTSPGCPAGAEIIEDVKRVVGDMEGVRSVEVELVWDPYWTPEKMDP
                     RVRAFLGF"
     gene            complement(797..1984)
                     /locus_tag="VFD73_06390"
     CDS             complement(797..1984)
                     /locus_tag="VFD73_06390"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HZI73646.1"
                     /translation="MTRYTEFRALGLLLLLTGQLFGPAGRASAQSVDEVDATIRDGIS
                     RGIYPAAVVVIGRSDSILYARGYGHFTWNPASPVPTPDSTLWDIASISKVLGTASAVM
                     RLVDAGTVDLDAPVSRYLPRFAGGARNMITVRMLLDHTSGLRSYAPLFKRARTRSAAI
                     DQLYLENPVREPGAEPVYSDLNALFLGLLVEQVTKVPLDRFVSQEVFAPLDLQQTTYH
                     PAPGIRRRVVPSAVWRGQPVAGQVNDPNAAVFGGVAGNAGIFTTGMDLAHYAQAWLRE
                     GSGPNGQWVSPATLKRFLTRGDKAGPRLLGWDTPELNLPEPSVFGTLISDAAYGHTGF
                     TRTELWIDPSRDLFLVFLTNRTFDPRVGDSMHRLRTVRAQLSDAAVRLVPHACQQELV
                     ARC"
     gene            complement(1981..2796)
                     /locus_tag="VFD73_06395"
     CDS             complement(1981..2796)
                     /locus_tag="VFD73_06395"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF012630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031012 - extracellular matrix [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HZI73647.1"
                     /translation="MKRAVLPLVTFGLFAMLAADRVAHLLARSPGTVVQGPSDTRPAT
                     VALRPEEPSHSTPAAATPAIAQLSPGTPTIDRLARLAARQQLSREAGQTYLDSLIVST
                     DSVVRRWPDRTGVPLRVSIIEGGPAGFQPKMAEYVREALDRWENVGTGIRFTLISDTA
                     AADIIVRWIDHFDFDRAGQTDLTWDQAGRVRKAAILLALRTNTGLVLPDPALLTVAVH
                     EAGHALGLPHSPDSNDVMFPATQTAILSERDRRTVQVLYQLPIGPVRDAVERP"
BASE COUNT          611 a          890 c          940 g          539 t
ORIGIN      
        1 gttccggatc ctcagcaatg agccaatgct gttcatggca aactcgcctc cccaaaacct
       61 gaacgcactt ggagaaatca gaggaatcgg gagagaacag ctggagcgga gggggcagga
      121 gatcatggct gcaatcgagc ggggactggc ggtcccggag agtgagcttc cccgactgcc
      181 gcgtccgctc cgaaagcagc ccgatcccgc ctacgagaca cggctcgaac gactaaaagc
      241 agcgcggaat gatttggctg agcgctatca gcttgctccc ggagtactct gtccaaacgg
      301 taccctggaa gcgttggcgc gggttgatcc atctacgctg gagcagctgg cgaagattcg
      361 ggagctgcgc cagtggcagc tgcgtgaatt cggagggaca ctactgcagg ctctgaagca
      421 gccttcatct catcaagagt gaatcagaaa cccagaaagg cccgcacgcg cgggtccatt
      481 ttttctggag tccagtaagg gtcccaaacc agctcgactt cgacagagcg gaccccttcc
      541 atatcgccta ctactcgctt gacgtcctca ataatttccg ccccggctgg gcatcctggg
      601 gacgtcagcg tcatttcaac gcggacgttc cccgcctggt cgctctcggc ttcgtagacc
      661 aggccgatat ctatgatgtt gagattgagc tccgggtcct tgaccgcgcg gagagctttc
      721 cgaatggcgt cggacgtggg gaccggcggg ctgggcgttt ctgcggaaga agacatgctt
      781 ggaaaatagt accggctcaa cagcgcgcca ccagctcttg ctgacaggcg tgcgggacca
      841 gccgtacggc ggcatccgaa agctgcgccc gtacggtccg caaccggtgc atggaatcgc
      901 ccacccttgg gtcgaacgtc cgattggtca agaagaccaa gaacaggtca cgtgagggat
      961 cgatccagag ctcggttctg gtgaagccgg tgtgaccgta tgccgcatca ctgatgagtg
     1021 tgccaaagac actgggctcc ggcagattga gctccggcgt gtcccatccc agcagtcgcg
     1081 gcccggcctt gtcccctcgg gtgagaaagc gtttgagggt agcgggactg acccactggc
     1141 cgttgggccc ggagccttcg cgtaaccagg cctgagcgta gtgggccagg tccatgccgg
     1201 ttgtgaatat ccccgcgttt ccggcaacac caccaaagac ggcagcattg gggtcgttca
     1261 cctgccccgc tactggctgt ccccgccata cggcgctggg caccacccta cgccggattc
     1321 ccggtgccgg atgataggtg gtttgctgca gatccaaagg cgcgaacact tcctgactga
     1381 cgaaccgatc gagaggaact ttggtcacct gttccaccag aagcccgaga aataaggcat
     1441 tcaagtcgct atagaccggc tccgctccgg gctcccgtac ggggttctcc agatagagtt
     1501 ggtcgattgc cgctgaccgg gtgcgggcgc gtttgaacag cggggcatag cttcgaaggc
     1561 cgctggtgtg atccagcagc attctcacgg taatcatgtt cctggcgcca ccagcaaacc
     1621 gcgggagata ccggctgact ggtgcatcga ggtctaccgt gccggcatca accaggcgca
     1681 ttaccgcgct tgcggtgccc aagactttgg agatcgacgc gatgtcccac agggtggaat
     1741 cgggcgtggg taccggggac gcaggattcc acgtgaagtg accgtaacct cgagcatata
     1801 gaatggaatc gctccgaccg atcacgacca cggccgcggg gtatatcccc cggcttatgc
     1861 cgtctcggat agtcgcatcc acctcgtcca ccgactgagc tgatgctcgg cctgcaggcc
     1921 caaacagctg gccggtcagg agaagcagaa gccccagggc gcggaactcc gtgtatctgg
     1981 tcatggccgc tctactgcgt cgcgaaccgg tccgattgga agctgataca ggacctggac
     2041 agtgcggcgg tcgcgctcgg aaagaatcgc cgtttgggta gccggaaaca ttacgtcgtt
     2101 ggagtcaggt gagtgaggaa gtcccagcgc atggccggcc tcatgcaccg cgacagtcaa
     2161 cagagcggga tcagggagca ccaagcccgt attggtccgg agtgcaagca ggatggcggc
     2221 cttgcgtacc ctgcccgcct gatcccaggt aagatcggtc tgccccgcac gatcgaaatc
     2281 gaaatgatcg atccagcgca caatgatgtc cgcggcggcg gtgtcggaaa tgagagtgaa
     2341 acgaataccg gtccctacat tctcccagcg gtcaagcgcc tcccggacgt actcagccat
     2401 tttcggttgg aaccccgccg gaccgccctc gatgatcgag acccgtagag ggacgccggt
     2461 tcggtccggc cagcgccgaa ccacggagtc ggtgctgacg atcaaagaat cgagataggt
     2521 ctggccggct tcacggctga gctgctgccg tgcggccagc cgggcgagcc ggtctatggt
     2581 cggagtgccc ggagagagct gagcaatcgc cggggtcgcg gcagccggtg tggagtggct
     2641 gggttcctca gggcggagcg caaccgttgc aggccgagtg tcgctcggac cctgcacgac
     2701 agtgccagga gaccgggcca gaaggtgcgc cacccggtcc gcagccagca tggcaaagag
     2761 cccgaaggtg accagaggca ataccgcccg cttcatggag ctccaacagc gtggtgaggt
     2821 ttgggatgcg tccagggcaa tgtcatcaaa gcgcttagcg catcggccag cgcccggact
     2881 tgtaaaagca accggggctc gaactggttt tcaacgcaag ttttgcgcga gcttacctat
     2941 ttctttgcgt ccagccagtt gggcccgata ccgatatcta
//
LOCUS       DASRPQ010000536         3064 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_689744, whole genome shotgun sequence.
ACCESSION   DASRPQ010000536 DASRPQ010000000
VERSION     DASRPQ010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3064
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_689744"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VFD73_06400"
     CDS             complement(<1..279)
                     /locus_tag="VFD73_06400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73648.1"
                     /translation="MQARLSQSRTRLVPGRHLGHTVDIDRLICPLRYDLRVRIDFIRL
                     LSQAWSLYETDLDQFLACPEAKAYFVWFRDVACARFHPELTRDARRLAS"
     gene            complement(329..1210)
                     /gene="cysD"
                     /locus_tag="VFD73_06405"
     CDS             complement(329..1210)
                     /gene="cysD"
                     /locus_tag="VFD73_06405"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: protein motif:HMM:NF013658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009336 - sulfate adenylyltransferase
                     complex (ATP) [Evidence IEA];
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0019419 - sulfate reduction [Evidence IEA];
                     GO_process: GO:0070814 - hydrogen sulfide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HZI73649.1"
                     /translation="MDHLDELESRSVHIFREAYANFKNLGMLWSIGKDSTVLLWLARK
                     AFFGHVPFPLIHIDTSFKIPEMIEYRDRLALEWNLTMIYGQNRQALEEKRTFPDGQLD
                     RIACCKALKTDALKHTLSGEWPRYRLNHTKKVYELDRNTEPFTGVIVGARADEEGSRS
                     KERYFSPRTAQSQWDVGDQPPEFWNQFKTEFAPGTHLRIHPLLDWTELNIWEYIRREN
                     IPTVSLYYNQGSGKRYRSLGCYTCTQPVDSESRNVDEIIVELQSGKFANIAERSGRAQ
                     DKADGGGLETLRRDGYM"
     gene            complement(1197..1784)
                     /gene="cysC"
                     /locus_tag="VFD73_06410"
     CDS             complement(1197..1784)
                     /gene="cysC"
                     /locus_tag="VFD73_06410"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF003013.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004020 - adenylylsulfate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HZI73650.1"
                     /translation="MTELAHLSRTVDHPGTRSPAPVLWFTGLSGSGKSTIATQVHQEL
                     VRRGLDVEYLDGDALREFFPNTGFTRAEREEHLRRTGYMASRLAAHGVAVVASFVSPY
                     RASREFVRKLCPQFLEIYVATPLEECERRDVKGLYARARRGEVRNFTGIDDPYEIPEH
                     PELTLDTRNRTVAECVSQVLELVPTNLDGRQYGSS"
     gene            complement(1781..2542)
                     /gene="cysQ"
                     /locus_tag="VFD73_06415"
     CDS             complement(1781..2542)
                     /gene="cysQ"
                     /locus_tag="VFD73_06415"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HZI73651.1"
                     /translation="MVVADLRIAISDLAREAGRATLPFYDGVLGSNVREKEDRSPVTL
                     ADEAAHEILVSGLREIDSDTPVISEEAEAASADDRRSWRRFWLVDPLDGTKEFLKRRA
                     EFTVNVALIEDGEPVLGVVLAPALDLLYWAVKGEGAWREEKGKPAERIYSTPAAPGTP
                     LTVVESLSHPSPELEEYLKTISVARRVKAGSSLKFCWVAEGRADIYPRLGPTMEWDVA
                     AGDCVYRQSGRNGERTSPLTYNKPDLRNPSFVIGL"
     gene            complement(2536..>3064)
                     /locus_tag="VFD73_06420"
     CDS             complement(2536..>3064)
                     /locus_tag="VFD73_06420"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF013730.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HZI73652.1"
                     /translation="AVRDRVLLRNYKWEPSIIQAAQRAEKYNQKAALILVTGEDEMER
                     KGVAKALERRLFDDGKVVYFLGIGSVLYGVDADIERKPENRLEHMRRLGEVANLMLDA
                     GIILVVAAAELTQEDLEVIKTAVQPDWIETVWAGDTITTDLVCDLHLSGNAVPEAVDQ
                     LKAHLQDKGIIFRPW"
BASE COUNT          580 a          981 c          906 g          597 t
ORIGIN      
        1 ggaggcgagg cgtcgcgcgt cccgggtgag ctctgggtga aagcgagcac acgcgacgtc
       61 cctgaaccag acaaagtagg ctttggcctc gggacaggcg aggaactgat cgaggtccgt
      121 ctcgtacagt gaccaggcct ggctcagcaa ccgaatgaaa tcgatccgta cacgcagatc
      181 gtaccggaga ggacatatca gtcggtcgat atcgaccgta tggcccaaat gtcgaccggg
      241 aacgagccgg gtgcgagact gcgacagccg agcctgcatc ctaccgatca agctgcgcca
      301 gtaggaggcc gtgcgagggc cgctgcgatt acatgtatcc atcgcgccgc agagtttcta
      361 ggcccccgcc atctgctttg tcctgtgccc ggccggagcg ctcggcaatg ttggcgaact
      421 tgccggactg aagttccaca atgatctcgt cgacattacg tgattcagaa tcgaccggct
      481 gggtgcaggt gtagcaccca agggagcggt agcgcttgcc gctgccctga ttgtagtaca
      541 gcgacacggt cgggatgttc tcgcggcgga tatactccca gatgttgagc tcggtccagt
      601 cgagcagcgg atggatccgc aggtgcgttc cgggagcaaa ctcggtcttg aactgattcc
      661 agaactcggg cggctgatcg ccgacgtccc actgcgactg agcagtccgc ggcgagaagt
      721 aacgctcctt ggaccggctt ccttcttcgt ccgcccgcgc acccacgatg acaccggtga
      781 agggctcggt attccggtcc aactcataga ctttcttggt gtgatttagc cggtaccggg
      841 gccactcacc gctcagcgta tgcttcagcg cgtcggtctt gagcgcttta caacaagcaa
      901 tgcggtccag ttggccgtcg gggaaggttc gcttctcctc cagtgcctgg cggttctggc
      961 catagatcat ggtcagattc cactccagcg cgagccggtc ccggtactcg atcatctccg
     1021 ggatcttgaa cgacgtgtcg atatgaataa gcggaaaggg cacatgcccg aagaaggcct
     1081 ttctcgccag ccacagaagc acggtgctgt ccttcccaat ggaccacagc atcccgaggt
     1141 tcttgaagtt ggcgtaggct tcccggaaaa tgtggacgct ccggctctcc agttcatcaa
     1201 gatgatccat actgccttcc atccaggttg gtcggcacca gctcgaggac ctgggacaca
     1261 cactccgcaa ctgtgcggtt acgggtgtcc agagtcagct ccgggtgctc cggtatctcg
     1321 tacgggtcgt cgatacccgt aaaatttcga acttccccgc gccgggcgcg ggcatagaga
     1381 cccttcacat ctctccgctc acactcctcc agcggtgtcg ctacgtaaat ctccaggaac
     1441 tgggggcaga gctttcgcac aaattcccgt gacgcacggt aaggcgagac aaaggacgcc
     1501 acgacggcca ctccatgcgc cgccaatctg ctcgccatgt aaccggtccg gcggagatgt
     1561 tcctcccgct cggcccgggt gaaccccgtg ttggggaaga actcccgcaa ggcgtcccca
     1621 tcgaggtatt cgacatccaa gccacgccga accaactcct gatgcacctg cgtggctatg
     1681 gtgctcttcc ctgacccgga cagtccagtg aaccacaaca ccggggccgg cgaacgggtt
     1741 cctgggtgat ccacggtgcg cgagagatgc gccaactcgg tcacagaccg atcacaaagc
     1801 tggggttgcg caggtcgggc ttgttgtagg tcagcgggga ggtccgctcg ccgtttcgtc
     1861 ccgattggcg atatacgcag tcgccggccg cgacatccca ttccatcgta ggccctaaac
     1921 gggggtagat gtcggcccgg ccttcggcca cccagcagaa tttgagggag ctccccgcct
     1981 tcactctccg agccacggag atcgtcttga ggtactcctc caactccgga gacgggtgcg
     2041 acagactttc cactacggtg agcggagtgc cgggcgccgc cggagtggag tagatgcgct
     2101 cggccggttt ccccttctcc tcccgccagg ccccctcacc ctttaccgcc cagtacaaca
     2161 gatcgagggc cggggcgaga acgacaccta gcaccggttc tccatcttca atcagagcca
     2221 cattgacggt gaactcggcc ctgcgcttga ggaactcctt ggttccatcg agtgggtcca
     2281 ccagccagaa ccggcgccag ctgcggcgat cgtcagcaga ggcggcttca gcctcctcag
     2341 aaatcacagg agtgtcgctg tcgatttcac gcagcccgct cacgagaatc tcgtgggcgg
     2401 cctcatcggc gagagtgacg ggactccggt cctccttctc ccggacgttg gaacccagaa
     2461 ccccgtcgta aaacggaagc gtcgcgcgtc cagcctcccg ggcgaggtcg ctgatggcga
     2521 tccgaagatc cgcgactacc atggccggaa aatgatcccc ttgtcctgga ggtgtgcctt
     2581 caactggtcc actgcctcgg gcaccgcgtt gccggacagg tgcaggtcgc agaccagatc
     2641 ggtggtgatc gtgtctccgg cccagactgt ttcgatccaa tcaggctgca ccgcggtctt
     2701 gatgacctcg agatcttcct gggtcagctc ggcggcggcg accaccagaa tgatgcccgc
     2761 gtccagcatc agattggcca cttcaccgag acggcgcatg tgctccagac ggttttcggg
     2821 cttccgctcg atatcggcgt ctaccccgta gagcacgctt ccgataccga ggaagtacac
     2881 caccttcccg tcgtcgaaca gtctgcgctc gagcgccttg gcgacgccct tgcgctccat
     2941 ctcatcctcg cccgtgacca ggatgagggc agctttctga ttgtacttct cggcccgctg
     3001 ggcagcctgg atgatgcttg gctcccactt gtaattgcgg agcagcaccc ggtcgcgcac
     3061 cgct
//
LOCUS       DASRPQ010000537         1072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_689820, whole genome shotgun sequence.
ACCESSION   DASRPQ010000537 DASRPQ010000000
VERSION     DASRPQ010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_689820"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..361)
                     /locus_tag="VFD73_06425"
     CDS             complement(<1..361)
                     /locus_tag="VFD73_06425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73653.1"
                     /translation="MERLAQADLPPIVLVVAPSGFGKTTLLSQWAERDGLPFAWVALD
                     EADNDPKVLLSRIAQVLDAVEPIDRQVFDALTSAGSSIPGLVVPRLGSAMMSRTSPVA
                     LVLDDVHVLHNSECRAAL"
     gene            complement(610..>1072)
                     /locus_tag="VFD73_06430"
     CDS             complement(610..>1072)
                     /locus_tag="VFD73_06430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73654.1"
                     /translation="LLLGLPLTSSYGGVRTFGYIAGAGGLSVVLVYLAVNVAVIRAFR
                     TEFRDEFRLWRHLLVPATAIALFLFPLWGVLHPRARQLADLLHFTALGWFCLGVIVAV
                     ILQARRPSSFETLGRVFMPADGQPEYALESAGNLAAGHGGQEGNGAHDGSA"
BASE COUNT          226 a          344 c          341 g          161 t
ORIGIN      
        1 acagcgcggc ccggcattcg gagttgtgca gcacgtgtac gtcgtccagt acgagtgcga
       61 ccggtgaggt cctcgacatc atggccgatc cgagccgtgg aacgaccaag cccgggatcg
      121 agcttcccgc ggaggtcagc gcgtcgaata cctgccggtc gatcggctcc accgcatcaa
      181 gcacctgcgc gatgcggctg agcaagacct tcgggtcgtt gtcggcctcg tccagcgcta
      241 cccaggcgaa gggcaggccg tcacgctcgg cccactgtga cagcagagtc gttttcccga
      301 aaccagacgg cgccaccacc aagacgatcg gaggaagatc tgcctgggcc agccgttcca
      361 tcagcaacgg acgccagacg gtccccggcc gcgtaggggg acagccggac ttcgacgtcg
      421 aagagccgga aacaggccgg cctaccgcca gtggtgggcc agccaactga cgcacgccac
      481 tgttactcat gttccgaaat gtgcgttgtg ggtctcctga ttcataatct tccgaggcca
      541 cagccgtgag ttgaattatc tcaaatgtga cgagactacg acacggaaac accctgaaag
      601 gagcctcgcc tacgcgctac cgtcgtgagc gccatttcct tcctggccac catgaccagc
      661 agcgaggttc ccggccgatt cgagtgcgta ttccggttgc ccatcggctg gcatgaatac
      721 ccggcccagc gtctcgaagc ttgagggacg ccgggcctgg aggatgacag cgacgatgac
      781 cccgaggcag aaccagccga gcgccgtgaa atgcagcagg tcggccagct ggcgggcgcg
      841 cggatgaagg acgccccaca gcggaaacag gaacaacgcg atggctgtgg ccggcacgag
      901 cagatgccgc catagacgga actcgtcgcg gaattcggtc cggaacgcgc ggatgacggc
      961 gacgttcacc gccaggtaga ccagtacgac tgagaggccg cccgctccag cgatgtagcc
     1021 aaatgtgcgc acaccgccgt agctggaggt caacggcagt cccagcagga gc
//
LOCUS       DASRPQ010000538         1142 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3508940, whole genome shotgun sequence.
ACCESSION   DASRPQ010000538 DASRPQ010000000
VERSION     DASRPQ010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3508940"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..516)
                     /locus_tag="VFD73_06435"
     CDS             complement(<1..516)
                     /locus_tag="VFD73_06435"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZI73655.1"
                     /translation="MKNLVRNYDGGITAYPAQLVSPRSVAELQSILRDAERYPSPVRA
                     MGSYHSLTPCASSEGTIISMSAMKRIIRVDQKELTFTAEAGLQFIEASRALRRRKLQF
                     LTNIEIGNMTLGSAACCHTKDGLDGGELGQVGSYVTGMKWVTPAGELAEVSETDNPAL
                     LRLMRSSYGLCG"
     gene            complement(849..>1142)
                     /locus_tag="VFD73_06440"
     CDS             complement(849..>1142)
                     /locus_tag="VFD73_06440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73656.1"
                     /translation="AGILPLGSTAEWIHERPAQPGSRYRYPLPHCTEVAFRYCLAWNA
                     PDFGTPTELQALQGNVRLIRMSETFPAPHRSALVSRPARTGPTGLNIVYREAR"
BASE COUNT          195 a          353 c          394 g          200 t
ORIGIN      
        1 cccgcacagg ccgtagctcg agcgcatcag gcgcagcaag gccgggttgt ccgtctcgga
       61 gacctcggcc agctcgccgg cgggcgtcac ccatttcatg cccgtgacgt aggagccgac
      121 ctgtccgagc tcgccgccgt ccaagccatc cttggtatgg cagcaggcgg ccgagccaag
      181 ggtcatattg ccgatttcga tattggtcag gaattgcagc ttgcgccggc gcagggcgcg
      241 cgaggcttcg atgaactgca ggcctgcctc ggccgtgaac gtcagctcct tttgatcgac
      301 gcgaatgatc cgcttcatgg cggacatgct gatgatggtg ccctccgatg aggcgcacgg
      361 cgtcaaggag tgatagctgc ccatcgcccg caccgggctc ggatagcgct cggcgtctct
      421 caggatcgat tggagctcgg cgacggatcg cggtgacacg agctgcgccg ggtaggcggt
      481 gatgccacca tcgtagttcc tgaccaggtt tttcaccttc cccctccccc ttatcgtcgg
      541 tcctgatcct ggaccgcgcc aaccgcatcc gcttcagtcc aggcccgggt gcctggtcgg
      601 gcgccggtca ggactgtagc tcaggcgggg ttggcgacgc agagatttgg gcacacgata
      661 gccgaacgcg cgccacccct gtgtgacgca aatcacaatg gccaggggac ccaaggccag
      721 gcggcgaaga gacgagcgtg atctttgctg gatgaggtca ccggaggtta gtgggggacg
      781 gtggcctccc cgcgggtcat gcggcagacc tagcgccccg tgcagatatg caaagagacg
      841 gcgaggctct aacgagcctc gcgatagacg atgtttaggc ctgttgggcc ggtccgtgcc
      901 ggccgggaga ccagcgcgga gcggtgcgga gccggaaagg tctcgctcat gcggatgagg
      961 cgaacattgc cctgaagcgc ctgcagctcg gtcggggtgc cgaaatcggg tgcgttccaa
     1021 gcgaggcaat agcggaacgc cacctccgtg caatgcggca gcgggtatct gtatcggctg
     1081 ccgggttggg ctgggcgctc gtggatccac tcagcggttg agcccagcgg caggatcccc
     1141 gc
//
LOCUS       DASRPQ010000539         1148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2255697, whole genome shotgun sequence.
ACCESSION   DASRPQ010000539 DASRPQ010000000
VERSION     DASRPQ010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2255697"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..>1148)
                     /locus_tag="VFD73_06445"
     CDS             complement(34..>1148)
                     /locus_tag="VFD73_06445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73657.1"
                     /translation="PVPAHAAGASDGRKLPEAPATARPRTTLNRYLVIIAAGLILLTG
                     AAAATHVFPFSNSDVRILTQNLVQLMPGDLPRNPQDCHTVTPSNPWTMPGLLLELQCT
                     SPELPGTVYAYQLDNPSDSETAWDNFNHWWGFDPASAEKGCPPEGSGNGVDKPTGSEL
                     PQAVLPVTECGLQTPSPGKTVPAYAWSWPASKAFAVARTGTGSSFAALHSWSIGQPAH
                     RVGLQEIIPAAIRNQDNQTACPNVSTQFGATAAIQCQHLQGIAAQVIIYYLYPSRTAL
                     ANGLSALLQTASFRKTRECTSGNSSFTDFLANCQSDYTIETPSLTGSIAEYTNGTQAI
                     IVSTDNEQNVMAVLVGANAGQLLAYWNQQQWIVTGS"
BASE COUNT          171 a          314 c          419 g          244 t
ORIGIN      
        1 gaatcgttag cgcaggtttg ctgtcagtta tgtctaagaa cctgtcacta tccactgctg
       61 ctggttccag tacgccagca gctgaccggc gttggctccg accaggacgg ccatgacgtt
      121 ctgctcgttg tcggtgctga cgatgatcgc ctgggtgccg ttggtgtact ccgctatgct
      181 gccggtcagg ctcggtgtct cgatggtgta gtccgactgg cagttggcga ggaagtcggt
      241 gaagctcgag ttaccgctgg tgcactccct ggtcttccgg aaactcgccg tctggaggag
      301 agcgctgagc ccgttggcca gcgcggtccg gctggggtac aggtagtaga tgatcacctg
      361 ggcggcgatg ccctgcagat gctggcactg gatcgccgcg gtcgcgccga actgggtgct
      421 gacgttgggg caggcggtct ggttgtcctg attccgtatc gcggccggga tgatttcctg
      481 aaggccgacc ctgtgcgcgg gctggccgat tgaccaggaa tgcagtgctg cgaatgagga
      541 gccagtaccg gtccgcgcga cggcgaacgc ctttgaggcc ggccagctcc aggcgtatgc
      601 ggggacggtc ttgccggggc tgggggtctg cagcccgcac tccgtcaccg gaaggacggc
      661 ctgggggagt tcgctaccgg tcggtttatc taccccgttt ccgctgcctt cgggtgggca
      721 tcctttttcc gcggaggctg ggtcgaaccc ccaccagtgg ttgaagttat cccaggcggt
      781 ctcggaatcg cttgggttgt ctagctggta ggcgtagacg gtacccggca gttcggggct
      841 ggtgcattgc agttccagga gcaggcctgg catggtccat gggttagacg gtgtcacggt
      901 atggcagtcc tgcgggttcc ggggcaggtc tcccggcatc agctggacaa ggttttgcgt
      961 gaggatgcga acgtccgaat tggagaacgg gaacacgtgg gtagctgcag cagcccctgt
     1021 gagcaagatc agccctgccg cgatgatgac gaggtaacgg ttcagggtgg ttcgcggtct
     1081 ggcagtggcc ggcgcctccg ggagtttgcg gccgtcactg gcgccagcgg catgggccgg
     1141 tacggggg
//
LOCUS       DASRPQ010000540         1337 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2581648, whole genome shotgun sequence.
ACCESSION   DASRPQ010000540 DASRPQ010000000
VERSION     DASRPQ010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1337
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2581648"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(122..1294)
                     /locus_tag="VFD73_06450"
     CDS             complement(122..1294)
                     /locus_tag="VFD73_06450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZI73658.1"
                     /translation="MQALYPRPHEHTAIRTDLKAIFVSLELSRSTWVITSLSPGGGEK
                     MSKHAVPSGDIPALLARLSQLKEKARARTGQVFPIIVIQEAGLDGFWIHRVLQQEGIE
                     SHVVDPASIATSRRRRRAKTDRIDGEALVRALLAYKRGEPRVCAMVQAPSPHEEDRRR
                     ISREREVLTAERVQHVNRIKGLLFAQGIGDDEPLHRNRRERLEELMTGDGRPLPEGLK
                     AQIRRELDRLELLIEQIKAVEAERDAVLAQAQASPGVSAPAAQLLTLRGIGPEAAATL
                     CSEGLFRTFSNRKQVAAYAGLAPTPWQSGSVHRDQGVSKAGNPRLRTIMIQIAWLWLR
                     HQPQSALTLWFRARIKRTGGRLGKTMIVALARKLLVALWKYATAGVLIEGAVLKPA"
BASE COUNT          214 a          434 c          449 g          240 t
ORIGIN      
        1 aggacgagac ccttgtctta gatcggctta tccaagccat gggctgatgc ggttcgtcca
       61 cctggatccg ccgggactga tcaggtcccg ggagattgcg ggaaaggggg tagcagcctg
      121 ctcaggcggg cttgaggacg gccccctcga tcagaacgcc agcggttgca tacttccaga
      181 gcgcgaccag cagcttgcgc gccagagcaa cgatcatcgt cttgccaaga cggccgcccg
      241 tgcgcttgat ccgcgcgcgg aaccataggg tcagcgctga ctgcggctga tgccgcagcc
      301 acagccaggc aatctggatc atgatcgttc gcagccgggg attgccggcc ttggagacgc
      361 cctggtcccg atggaccgat ccgctttgcc acggcgtggg ggccagcccc gcataagccg
      421 caacctgctt tcggttactg aacgtgcgga acaggccctc cgagcagagc gtggcggctg
      481 cctcgggtcc aatgcctcgc agcgtcagca actgggccgc tggcgccgac acaccggggc
      541 tcgcctgcgc ttgggccagc acggcatccc gctcggcttc gacagccttg atctgttcga
      601 tcaggagctc gagccgatcg agctcccggc ggatctgggc cttcaggccc tccggaaggg
      661 ggcggccatc gcccgtcatc agttcctcaa gccgctcccg tcggttgcgg tgcaggggct
      721 cgtcgtcgcc gatcccttgg gcgaacagaa gccccttgat gcggttgacg tgctggaccc
      781 gttcggcggt caggacctcg cgttcacgac tgatccggcg ccgatcctcc tcgtgtgggc
      841 tcggagcctg gaccatcgca cacacccggg gctcgccccg cttgtaggcc agcagggcgc
      901 gaaccagggc ttcgccatcg atccggtcgg tcttcgcccg ccgacgccgc cgggacgtgg
      961 cgatggaggc gggatcgacg acatggctct cgatcccttc ctgttgcagg acgcggtgga
     1021 tccagaaccc gtccagcccc gcttcttgga tgacgatgat gggaaagacc tgccccgttc
     1081 gggcgcgggc tttctccttg agctgggaca agcgcgccag gagggcgggg atgtcaccgc
     1141 tgggcaccgc atgcttggac atcttctcac cgccgcccgg cgagagtgat gtgatgaccc
     1201 aggttgaacg gctgagttcc agggacacga agatcgcctt gagatctgtg cggatagcag
     1261 tgtgttcgtg aggtcgaggg tagagggctt gcatggtcgc tcccgcgtgg gtggttcagc
     1321 accccactct gccagag
//
LOCUS       DASRPQ010000541         1531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3204888, whole genome shotgun sequence.
ACCESSION   DASRPQ010000541 DASRPQ010000000
VERSION     DASRPQ010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3204888"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..239)
                     /locus_tag="VFD73_06455"
     CDS             complement(<1..239)
                     /locus_tag="VFD73_06455"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HZI73659.1"
                     /translation="MPLSPMEVLRKVPLFSGLGEPDLAAFADLTRERSYPKGSVIVFE
                     DDPGDALFLVAAGQVKVVLIAEDGREVILSVLGEG"
     gene            469..693
                     /gene="rpmE"
                     /locus_tag="VFD73_06460"
     CDS             469..693
                     /gene="rpmE"
                     /locus_tag="VFD73_06460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003151132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HZI73660.1"
                     /translation="MKADVHPNYRKIMVQCACGNQFETRSTASSIHVEVCAQCHPFFT
                     GKQRLVDTAGRVDRFRRKYQTEPAAAAPKA"
     gene            697..>1531
                     /locus_tag="VFD73_06465"
     CDS             697..>1531
                     /locus_tag="VFD73_06465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PCRF domain-containing protein"
                     /protein_id="HZI73661.1"
                     /translation="MEARLRQALSRAEEIGQALADPATARDPAKLKSLGREHTRLAPV
                     VKLATRLTRLQQDLEQARELVTESDPELVGLAKADLARLPSEISSLQEQLHELLLPRD
                     PHDDRDAIIEIRAGTGGDEAALFAADLYRMYQRYSESHRLSWEPISISEGLLGGIKEA
                     IVAVRGDEAYGLLRRESGVHRVQRVPATETQGRIHTSAATVAVLPEAEEVDIKLDPQD
                     LKIDVFRSSGPGGQSVNTTDSAVRVTHLPTGLVVSQQDQKSQLQNKIKAFEVLRARLL
                     DR"
BASE COUNT          310 a          484 c          460 g          277 t
ORIGIN      
        1 cttccctctc caagcacaga gaggatgacc tcacggccat cctctgcaat cagtaccacc
       61 ttgacttgtc ccgctgcgac gaggaacagc gcgtctcctg gatcatcttc gaagacgatc
      121 acgctgccct ttgggtaact gcgctcccgc gtcaaatcgg caaaggcggc caggtcgggt
      181 tcccctaacc cggagaacag gggaaccttt cgcaggacct ccatcgggga cagtggcact
      241 cgcgcctcgc agtatggaag tgtttgggcg tagcatactt gcgcccgtga ttagtgtcaa
      301 ttgactgaac gggaacgaaa acggttccgc tcagcgggcg agcgggaacc ctgagcagcg
      361 ttattcggtt cattcgctac tgctgcgaca agccggacga gtcggcttgc atgtcggcgc
      421 acaagccgtc taaattgaag ggcttagcac caaaccttgg agcattcgat gaaggctgat
      481 gtccatccga actatcgcaa gatcatggtt caatgcgctt gcggtaatca gtttgagacc
      541 cgctcaactg catcctcgat tcacgttgag gtgtgcgccc agtgccatcc cttctttacc
      601 ggcaagcagc gcctggtaga taccgccggc cgagtcgatc ggttccgccg gaagtaccag
      661 actgagccgg cggccgcggc acccaaggcc taagccatgg aggcccggct tcgccaggcc
      721 ttgtcgcgcg ccgaagagat cggccaggcc ctggcagatc cggccactgc acgcgacccc
      781 gcaaagctca agtcgctcgg gcgagaacac acccggttgg cacccgtggt gaagctcgcc
      841 acccggctta cccggttaca gcaggatctg gagcaggctc gcgaactggt gaccgaatcc
      901 gatcctgagc tggttggcct ggccaaagcc gacctggcgc ggctcccctc ggagatctcc
      961 tctctgcagg aacaactgca cgaactcctg ttgccgcgcg accctcatga cgatcgcgat
     1021 gccatcatcg agatccgtgc cgggaccggc ggcgacgagg cagcactgtt tgcggccgac
     1081 ctgtaccgga tgtatcagcg ctacagcgaa agtcaccgcc tctcatggga gccgatctcc
     1141 atcagtgagg gtctgctggg ggggatcaag gaggcgattg tcgcggtacg cggcgacgag
     1201 gcgtacggac tgcttcgtcg cgagtcgggc gtccatcgcg tgcagcgggt tccggccact
     1261 gagacgcagg gccggattca cacatccgcg gcaaccgttg cggtccttcc cgaggcggaa
     1321 gaggttgata tcaagctcga cccccaggat ctcaagatcg acgtcttccg atcttccggt
     1381 cccgggggac agagcgtcaa caccaccgat agcgcggttc gggtcaccca tctgcccacc
     1441 ggactggtgg tgagccagca agaccagaag tcccaactgc agaataagat caaggcattc
     1501 gaagtgctcc gggcccgact gctggatcgc a
//
LOCUS       DASRPQ010000542         1031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4451070, whole genome shotgun sequence.
ACCESSION   DASRPQ010000542 DASRPQ010000000
VERSION     DASRPQ010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4451070"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..418)
                     /locus_tag="VFD73_06470"
     CDS             complement(<1..418)
                     /locus_tag="VFD73_06470"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI73662.1"
                     /translation="MRHNQDAAVAAATVADDARSALLADLLGRVAGCFPRRETRKCWG
                     QMVSGLLMELEDHNCWTIAEAIGHRGPHRLQHLLSRAIWDDQQVLDLAAAWAVSHLGD
                     GDAVLIVDETADEKSSADAAGAARQYSGTVGGIALCQ"
BASE COUNT          176 a          368 c          302 g          185 t
ORIGIN      
        1 cctggcacag cgcgataccg cccaccgtgc cgctgtactg ccgcgccgcg ccggccgcat
       61 cggcagagga cttctcatca gcggtctcat ccacgatcag caccgcgtcc ccgtcgccga
      121 ggtgactgac cgcccacgcc gctgcgaggt ccaggacctg ctggtcgtcc cagatcgcac
      181 gcgagagcag gtgctgcagc cggtgcggcc cgcggtgccc gatcgcctcg gcgatcgtcc
      241 agcagttgtg atcttccagc tccatcagca gcccgctgac catctggccc cagcacttcc
      301 gcgtctcccg ccggggaaag cacccggcca cccgccccag caggtccgcc agcagcgcgg
      361 accgggcatc atccgctacc gtggcagcag cgactgccgc atcttggttg tgtctcacaa
      421 acccatcatg atcgcggcag ccgcacctca cgcggtctcc ccgacctgcg ccaacaaccc
      481 cacggtcacg aactacagct gccgtagctg atcgggcacg cagcgggcac ggcctcttca
      541 tcccgaaata acggcgccgc tagggcgttt ggcgccatcc cagctagctt ggtgtgctgg
      601 tggtcgtgct ggctggcgac tacggctatg cccggctgcc cctggaattt gcccggtgac
      661 tgcccgcact gtgcagggga tagccccgta ccctggccac gctcgctgcc tggcccttag
      721 tttctggcca gagtgcttcc ggaggctcaa tgtcaagggt ggccgaaggt catttccgga
      781 ggaaacgcga agcgccctcg atattgaggg gaagcacgtc acaattcagg ggccatcccc
      841 ggacctgagc caagccagga cccttgcaca ttccaccgta tgccgatagc ccctatgtcc
      901 tgagctagga ctatcagctt gggaattgga cagatcacgg ctgctggtgc tgctgaccag
      961 gcaacctggt tggcctggag tagccatgat tgaccgttcg tcgccctcac taattgcacg
     1021 ttgattgcac t
//
LOCUS       DASRPQ010000543         3764 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2883538, whole genome shotgun sequence.
ACCESSION   DASRPQ010000543 DASRPQ010000000
VERSION     DASRPQ010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3764
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2883538"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..491
                     /locus_tag="VFD73_06475"
     CDS             <1..491
                     /locus_tag="VFD73_06475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73663.1"
                     /translation="GGGAMLDLGLSILDLGLWLGGSSPPSRVSASLDPVGKDRSVEQS
                     GSAFVVCENGTSIFVDVTWRHLGEGERFGVGIRGSKGTAGINPLNVWKELHGVAVDVS
                     PTGSVGRENAFTASYRAEWAHFQAAIAGEAKIPSLQEHLTLHKVVDAIYRSAFDGRDV
                     TL"
     gene            542..1819
                     /locus_tag="VFD73_06480"
     CDS             542..1819
                     /locus_tag="VFD73_06480"
                     /inference="COORDINATES: protein motif:HMM:NF024779.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4105 domain-containing protein"
                     /protein_id="HZI73664.1"
                     /translation="MGLAALVLAGAGAPVSAQNAATPHGPVASPDTTLTVYLMTMGPG
                     KHVWERFGHNAIWIHDPVHGTDQTYNYGLFDFRQHNFLLRFIQGRMWYWMEGFPAQSY
                     VESYRRNNRSVWIQELEIAPEKRRELQAFLEWNEQPEHRFYHYDYYLDNCSTRVRDAL
                     DRALDGRLRAATVNVTTPRTFRFHTQRLTANDPPVFTGLLLALGHPVDRPITAWQEMF
                     LPLAMREWVRTVRVSGTDGHERPLVRSERTLFQASEPTPPAQPPIWLWRYLAAGIGLA
                     ALLVALAPGAATPSLARWAFLLIVWIWCLVSGVAGLVLAGLWGLTDHAAAYNNENVLQ
                     ADLLSLLLIWFVTRLAFGRGTHARAALILAAVIAGISLLGCALKLLPQFYQTNGEVIA
                     LALPAHLGVLAGIYRLDATQDSRSRASASPAAG"
     gene            complement(1774..2427)
                     /locus_tag="VFD73_06485"
     CDS             complement(1774..2427)
                     /locus_tag="VFD73_06485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73665.1"
                     /translation="MPREAEAQAQPVVVAILPFQDRGSYGQERDIFRALQLGIPATIA
                     SELSEHGELRLADPARLRRALGSQELSTLSRLDAATAARIGKEVGARYAITGSFADFY
                     GKVRLDARIIDTESGQILTMVSNDPRQENRSELYRIIQNVGHQVLAVASPSVMRRSIP
                     ATEDRAIPTEALVEFSLGLLAERDGDRGGATQHYQKALAIYPGYPAAGEALARLRES"
     gene            complement(2484..3350)
                     /locus_tag="VFD73_06490"
     CDS             complement(2484..3350)
                     /locus_tag="VFD73_06490"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HZI73666.1"
                     /translation="MIHEVTFWGTRGSIPTPGPGTARYGGNTACISITGAPGRLVILD
                     AGSGLRPLGHELMKQHNGVLAADILLSHTHWDHIQGLPFFKPLSTRDTEVSIYGAAQE
                     GVPLKEILGRQMDPMVFPIPLNALAASLTVVEIEEGEFEIDDFRICAFRLRHPGTTLG
                     YRLAPRSGGREVAYVTDNELGTGGTYEVTPDWRARMVEFIQGTDTLIHDAMYLDQIIQ
                     ARAGWGHSTPRQAVDLAREGGCRRLILFHHEPEHDDAALDHLLADTREYAERVAPRLK
                     VEAAIEGMTFPL"
     gene            complement(3443..>3764)
                     /locus_tag="VFD73_06495"
     CDS             complement(3443..>3764)
                     /locus_tag="VFD73_06495"
                     /inference="COORDINATES: protein motif:HMM:NF024934.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HZI73667.1"
                     /translation="SPEVAISLLKEISRRLRRADEKIGSLVLLDVNGRVAHLLLRMAE
                     DEGGDRITRKLTHHTIAQMIGSSRETVSRTMRNLVERGIIQVTRKDITLKDRRSLMLA
                     ARRA"
BASE COUNT          650 a         1171 c         1195 g          748 t
ORIGIN      
        1 cgggcggtgg cgccatgctg gatttgggtc tttcgatcct ggatctgggg ctgtggctgg
       61 gtggaagctc cccaccgtct cgcgttagcg cgagcctgga tccggtcggg aaagaccgct
      121 cggtcgagca gtccggcagc gcgttcgtgg tttgtgagaa tggcacctcg atctttgtgg
      181 atgtcacctg gcgtcatctc ggagaagggg agcggttcgg cgtcggaatc cggggtagca
      241 agggcaccgc cgggatcaat ccgctgaatg tctggaagga gctccacgga gtcgcggtgg
      301 atgtctctcc cactggttcg gttggccggg agaatgcctt taccgcctca taccgcgcag
      361 agtgggccca cttccaggcg gcaatcgcag gcgaggccaa gattccctcg cttcaagagc
      421 acctgaccct ccacaaggtg gtcgacgcga tttatcgatc cgctttcgat ggcagagatg
      481 tgaccttgtg aaggcggggc agcggggcag cggggcagcg gggcaggtta gaagcgcctt
      541 catgggcctg gcggctctgg tcctcgctgg tgcgggcgcg ccggtgtcgg cccaaaacgc
      601 tgccacgcct catggtcccg tggcctcgcc ggacacaact ctcaccgtgt acctcatgac
      661 gatgggcccc ggcaagcatg tctgggagcg cttcggccac aacgccatct ggatccatga
      721 tccggtacac ggtaccgacc agacctataa ctacggattg ttcgacttcc gacagcacaa
      781 ctttctcctg cgattcatcc agggacgaat gtggtactgg atggagggat ttccggctca
      841 gtcctatgtg gaatcctacc gccggaataa tcgctccgtc tggatccagg agctggagat
      901 cgcaccggaa aagcggcggg agctccaagc cttcctcgaa tggaacgaac agccggagca
      961 tcggttctat cactacgatt actacctcga caactgttcg actcgcgtcc gtgatgccct
     1021 cgaccgcgca ctcgatggcc ggctgagagc agccaccgtg aatgtgacca ctcctcggac
     1081 ctttcgcttt cacacgcagc ggctcaccgc gaacgatcct ccggtcttta ccggcctgct
     1141 gctcgccttg ggacacccgg tggaccggcc gatcaccgcc tggcaggaaa tgtttctccc
     1201 ccttgccatg cgagagtggg tacggaccgt gagagtaagc gggacagacg gacacgagcg
     1261 tcccctggtc cgatccgaac ggacattgtt ccaggccagc gaaccgaccc ctccggctca
     1321 gccgccgata tggctttgga gatatctcgc ggcgggcatc ggcctggcag cgcttctggt
     1381 cgcgctggct cctggggcgg cgaccccatc gttggcacgc tgggcctttc tcttgattgt
     1441 ctggatctgg tgtctggtca gcggtgtcgc tgggctggtg cttgccggac tgtggggcct
     1501 caccgaccac gcggcagcgt acaacaacga gaatgtgctc caggccgacc tgctcagtct
     1561 cctgctgatc tggtttgtca ctcgcctggc attcgggcgg ggcacccacg ccagggcggc
     1621 gctcattctt gccgctgtga tcgctgggat ctcgctgctc ggctgtgcgc tgaaactcct
     1681 accccagttt taccagacca atggtgaggt gatcgcgctg gcgctgcctg cccacctggg
     1741 tgttctcgcc gggatctacc ggttagatgc gactcaggac tcgcgcagcc gcgcgagtgc
     1801 ctcgccggcg gcaggatagc cgggatagat ggcaagtgcc ttctgatagt gctgggtggc
     1861 accacccctg tccccgtccc gctccgcaag caaacccaga ctgaactcca ccagcgcctc
     1921 ggttgggatg gcacgatcct cggttgccgg tatcgaccgc ctcatcaccg acgggctcgc
     1981 gaccgcgagc acctgatgtc ccacattctg gatgattcga tacagctccg accgattctc
     2041 ttgtcgagga tcgttggaga ccatcgtcaa gatttgtccg ctctccgtat cgatgatccg
     2101 ggcatccaga cgaaccttgc cgtagaaatc cgcaaagctg ccggtgatgg cgtagcgagc
     2161 tccaacctcc ttgccaatcc gcgccgcggt tgccgcatcg agacggctga gcgtactgag
     2221 ctcctggctg cccagcgccc ggcggagtcg ggccggatcg gccaggcgca gctcgccatg
     2281 ttcggagagt tcgctcgcga tggtggccgg aattccgagc tggagcgcgc ggaagatgtc
     2341 ccgctcttga ccgtaggatc cgcggtcctg gaatgggaga atcgccacca ccacaggttg
     2401 cgcctgtgcc tcggcttctc ggggcatgcc gagggcagcg aacgcaacgc agggtatcag
     2461 cgcgcgttct acgatccgcc gcgtcatagt ggaaatgtca ttccttcgat cgccgcttcc
     2521 accttgagcc gcggggccac gcgctcagcg tattcgcggg tatcggccag cagatggtcg
     2581 agtgcggcgt cgtcgtgctc cggctcgtga tggaacagga tgaggcgacg acacccacct
     2641 tcccgagcga ggtccaccgc ctgccttggc gtggagtggc cccatcccgc tcttgcctgg
     2701 atgatttggt ccaggtacat ggcgtcatgg atcagggtat cggtaccctg gatgaattca
     2761 accatccgcg cccgccagtc cggggtcacc tcgtacgtcc cgcccgtacc aagctcgttg
     2821 tctgtcacgt aggccacctc gcgcccgccg gaacgggggg ccagccggta gcccagcgtg
     2881 gtgccgggat gacgcaggcg gaacgcgcag atccggaaat cgtcgatctc gaactcacct
     2941 tcctcgattt ccacaacggt cagcgaggcg gccagtgcgt tgagaggaat cgggaagacc
     3001 atgggatcca tctgccgtcc gagtatctcc ttcagcggta cgccttcctg agcggcaccg
     3061 taaatggaaa cctcggtatc tcgagtgctg agaggtttga aaaagggcaa cccttgaatg
     3121 tggtcccagt gggtgtgtga aaggagaatg tctgccgcca gcacgccatt gtgctgcttc
     3181 atcagttcgt ggccgagcgg acggaggccg ctgccggcat cgagaatgac taagcggccc
     3241 ggcgctccag taatgctgat acacgcggta ttcccaccat accgtgctgt tccgggaccg
     3301 ggagttggga tcgatcctcg ggttccccag aaggtgacct catgaatcac gggggaccgc
     3361 cgtcgtggta ggccatgccg gaaccttccc gacagacatg ggccaggcag cggcagcagt
     3421 cacatgcggg ctgtgactgt aatcacgccc ttcttgccgc caacatgagc gaccggcggt
     3481 ccttgagggt gatgtccttg cgggtgacct ggatgatgcc gcgctcgacc agattgcgca
     3541 tggtccgcga tacagtctcg cggctggagc cgatcatttg agcaatggtg tggtgggtaa
     3601 gcttccgggt aattcggtcg ccgccttcgt cctccgccat tcggaggagc aggtgggcca
     3661 ccctgccgtt cacgtccagc agcactaagc tgccgatctt ctcgtcggct cggcggagcc
     3721 ggcgcgagat ctccttgagg agtgagatgg cgacttccgg tgag
//
LOCUS       DASRPQ010000544         1106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_61950, whole genome shotgun sequence.
ACCESSION   DASRPQ010000544 DASRPQ010000000
VERSION     DASRPQ010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61950"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..455
                     /locus_tag="VFD73_06500"
     CDS             <1..455
                     /locus_tag="VFD73_06500"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HZI73668.1"
                     /translation="GAGGASAPLIDVLCASCALPLYYPPVTICGRRLGDGGLRAVLPL
                     APAADLPVDLVLAVDVGPGFDVPKADSASRIPPLIRAHDDAIGIMMAANSAAELALWR
                     QTVSRPPLVYVRPRMERNATFSVDRVREYANEGRRATREALELWQQDS"
     gene            486..893
                     /locus_tag="VFD73_06505"
     CDS             486..893
                     /locus_tag="VFD73_06505"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HZI73669.1"
                     /translation="MKASEVMVPDPHVAVAGAMASEVAIMLKTRNISVVPVVDDHRSR
                     KFLGTLSDRDLVTRCLAEGKHPWHTRADSLMRTNSPVVRPDRELAGFELRMDLDPSES
                     HLRPTITVVDETGRVVGFISHPEQVPEITIVWG"
     gene            924..>1106
                     /locus_tag="VFD73_06510"
     CDS             924..>1106
                     /locus_tag="VFD73_06510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73670.1"
                     /translation="MPDFKLFTLEEAQRTLPLVRRIVADLTEEYPAWRAAVGRFELLT
                     GGARADWGETQELVAAR"
BASE COUNT          172 a          334 c          375 g          225 t
ORIGIN      
        1 ttggagccgg cggcgcgagt gccccgttga tcgacgttct ctgtgccagt tgtgcgctgc
       61 cgctctatta ccctccggta accatctgcg gtcgccgtct gggcgacggt gggctccggg
      121 ctgtgctgcc gctcgcgccg gccgcggatc tgccggtgga tctggtgctc gcggtcgatg
      181 tgggtcccgg ctttgatgtt ccgaaagcgg actcggcgtc ccggattccg ccactgatcc
      241 gagcccacga tgatgctatc ggcatcatga tggctgcgaa ttccgcggct gagctcgccc
      301 tctggcggca gactgtgagc cggcctccgc tggtttacgt gcggccgcga atggaacgga
      361 acgcgacctt tagcgtcgat cgggttcgcg agtatgccaa cgagggccgc cgcgccactc
      421 gagaagctct ggaactgtgg cagcaagact cttgaccgct ctccctttcc ggtcaaattg
      481 agcccatgaa agcctccgaa gtgatggtgc ccgatccgca cgttgctgtg gcaggcgcca
      541 tggcaagcga ggtggccatc atgctcaaga cccgcaacat ttcggtggta ccggtggtcg
      601 atgaccaccg aagtcgcaag ttcctgggga ccttgagtga ccgggatctg gtgactcgct
      661 gcctggccga ggggaagcac ccctggcaca ccagagccga ttcactgatg cggaccaact
      721 ctcccgtggt ccggccggat cgcgagctgg cggggtttga gctgcggatg gacctcgatc
      781 catcagagtc ccatctccgt ccgactatta ccgtggtgga tgagaccggg cgggtggtgg
      841 gattcatcag ccatcccgag caggttcccg agatcacgat cgtgtggggt tgaattttcc
      901 ggtggagaag tgacctgacg gccatgcccg atttcaagct gtttaccctg gaggaagccc
      961 agcggaccct gccgctggtc cgccggattg tggcggacct gaccgaggag taccccgcgt
     1021 ggcgtgctgc ggtgggtcgg ttcgagctgt tgaccggcgg tgcccgggct gattggggtg
     1081 agacccagga actggttgcc gctcgc
//
LOCUS       DASRPQ010000545         1133 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1950802, whole genome shotgun sequence.
ACCESSION   DASRPQ010000545 DASRPQ010000000
VERSION     DASRPQ010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1950802"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..719)
                     /locus_tag="VFD73_06515"
     CDS             complement(<1..719)
                     /locus_tag="VFD73_06515"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZI73671.1"
                     /translation="MIGASLSLTGDFSADGQAFQRGYEIWAADVNNNGGLLGRPVKLV
                     ILNDGSSPTTVVSNYQKLISVDHVNLTFGPFSSLLTAPAASTAARYRYAMIQGAGSTD
                     DVFNLASNKQVHNVFSPSLPVKDYLLPFVTWVKSLPPGERPTTAAYPMANDPFADPPV
                     QVVQHLFEQMGIKTVYSKIFPAEVSAYKVPADQVAATGAQMVVLGSPDVPTVSAFVQA
                     FKQQHYNPKIFIAASGPDQGQA"
BASE COUNT          209 a          357 c          363 g          204 t
ORIGIN      
        1 gcctggccct ggtccgggcc ggatgcggcg atgaagatct tcgggttgta gtgctgctgc
       61 ttgaacgcct ggacgaacgc tgacacggtt ggcacgtctg gggaacccag gaccaccatc
      121 tgggcgccgg tcgcggccac ctggtcggcg ggcaccttgt atgcgctgac ctcggcaggg
      181 aagatcttgc tgtagacagt cttgatcccc atctgctcaa acaggtgctg caccacctgg
      241 accggcgggt cagcgaacgg gtcgttggcc atcgggtatg ccgctgtcgt cggccgctcg
      301 cccggcggca gcgatttgac ccaggtgacg aacggcagca ggtaatcctt gaccggcagg
      361 ctgggtgaga acacgttgtg aacctgcttg ttagacgcca gattgaagac gtcgtcagta
      421 ctgcctgcac cctgaatcat cgcgtacctg taccgcgccg cggtggatgc ggcaggggcg
      481 gtgagcagcg aagaaaatgg cccgaaggtc aagttcacgt gatcgacgga gatcagcttc
      541 tggtagttgc tcaccacggt agttggggag ctgccgtcgt tgagaatgac cagcttgaca
      601 gggcgcccga ggagtccgcc gttgttattg acgtcggcgg cccaaatctc atagccgcgc
      661 tggaacgcct gaccatcggc ggagaagtcg ccggtcagcg acagcgaggc cccgatcaag
      721 atcggtgact tgctcgagct gccgctggag ctgttagtag tgccgccact gctgcaggcg
      781 gcgatcccca ccgccaaagc ggcagccgcc aaagaccaga accgaacgcg atgagacctc
      841 atccgcggtc ccccttccca tagctgctga gtgccatgga catccagcgc ccagattccg
      901 tgccgcggca tacagacaca ggccgccagt ccaggaacgc catagattgt ggcatagccg
      961 ctcagtggcc caacgtactg cctccccacg ctgcgctcgc cagcttggcc aatccgtgac
     1021 ctcggccttc tgagcccgca cctgtggtca atgctgacat cgagcaactg cccagcggtc
     1081 tcccaatggc cgtttcggct gcgctgcccg gggcgagcat gggctcggtg gac
//
LOCUS       DASRPQ010000546         2526 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2883548, whole genome shotgun sequence.
ACCESSION   DASRPQ010000546 DASRPQ010000000
VERSION     DASRPQ010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2526
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2883548"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..295)
                     /locus_tag="VFD73_06520"
     CDS             complement(<1..295)
                     /locus_tag="VFD73_06520"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZI73672.1"
                     /translation="MTRVALFGVLAVLAAVPAYSQSPAASNQAVLKEYRALDQAQFKK
                     DRATMERLMASDYSYTHSNGAVNDKTADIKETMSEDIKWTDTKSDDVKVRMYGN"
     gene            complement(489..>2526)
                     /locus_tag="VFD73_06525"
     CDS             complement(489..>2526)
                     /locus_tag="VFD73_06525"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HZI73673.1"
                     /translation="ILPLFDSGSSNGLLYYVMPYIEGESLRQRLDRERQLPIEDAVRI
                     TREVGEALGYAHRLGFVHRDIKPANILLSHNHAVVADFGIARAITAAGGEQLTEVGLS
                     LGTPSYMSPEQALGGNDVDAQSDLYSLGCMLYEMLVGDPPFLGHNAQQILARHVMDPV
                     PSPRTVRAAVPVALEQALLRALAKAPVDRYATAAQFIQALETTPVSGPQATAVLRPTP
                     PAESIAVLSFLNMSGDPDNEYFGDGIAEELINLLSSIKGLHVASRTSAFAFKGTKTDT
                     RSIGQTLNVRTVLEGSVRRAGNRLRITAQLINAADGYHLWSERYDRDMADVFAIQDEI
                     SQTIVQALQIQLTPERQKTLLKRHTDNPDAYNAYLKGRYHWNNRPLGTAKAIEYFEKA
                     IAIDPEYAMAYSGLADCYSTLGSWEAGVLPPREASSRAAAAARRALELDDTLGEAHSS
                     MAFVNLSFDWNWPSAQRGFHRAIELSPSYPTAHHWRSHLAAAMGRFDESLAESQRYLE
                     LEPTDVMANFHLIWHYWLARQPGPAIDQGWKTLELHPTSLWPAFFMGLALVEQDQIEE
                     AIGHFQNALTMSGGKSFIRSALGHAYAAAGERDRAAEILEELEEQSLRQSTPAYDRAV
                     IYAGLGERDRAFEWLERAYEERSSWMSYLNVEPRLDPLRSDSRFSSLLRNVGLE"
BASE COUNT          455 a          770 c          804 g          497 t
ORIGIN      
        1 cattgccgta cattctcacc ttcacatcat cactcttggt gtcggtccac ttgatgtcct
       61 ctgacatcgt ctccttgata tcagcggttt tgtcgttcac cgcgccattt gagtgggtgt
      121 aggaatagtc gctcgccatc agccgctcca tggtcgctcg gtctttcttg aactgcgcct
      181 ggtcgagcgc gcgatactcc ttgagtactg cttgattgga tgcagctggg gattgggagt
      241 aggcgggtac agcggcaagc actgcaagga caccgaacag ggcaacgcga gtcatacaag
      301 ctcctctgag tggtaggcat tcggccgcac ttcatctggt gcggtcttcg tcgagctacg
      361 gcgcagccgc agcggcggcc ggcataaggc tgccctgaat cacggggcag acaccccgga
      421 gagaatgtgg aggggtgagg agaggtaccg cgtggtgcag caggcgtcaa gagtacgccg
      481 agctggcttc actccaagcc cacgttcctg agaagcgacg agaaacgaga atccgagcgc
      541 agtgggtcga gcctcggctc gacgttgaga tagctcatcc agctcgaacg ctcctcatag
      601 gcccgttcca gccactcgaa ggcgcgatcc ctctctccga gtccggcata gatcaccgca
      661 cggtcgtagg caggcgtgga ctggcgaagg ctctgttctt ccagctcctc caggatctcg
      721 gcagcccggt cccgttcacc agccgctgca taggcatgcc caagcgccga gcggatgaag
      781 cttttgcccc cagacatcgt aagggcgttc tggaagtgtc caatggcttc ttctatctga
      841 tcctgctcca ccaaggcgag ccccataaag aacgccggcc acaatgaggt cggatggagt
      901 tccagggtct tccaaccctg atcgatcgcc ggtcccggct gccgcgccag ccagtaatgc
      961 cagatcaggt gaaagttggc catgacgtcc gtcggctcca gctcgaggta gcgctggctt
     1021 tccgccagcg attcgtcgaa ccgtcccatt gccgcagcca ggtgagaccg ccagtggtgg
     1081 gccgtgggat acgaagggct gagctcgatc gcgcgatgga atccccgctg agcagagggc
     1141 cagttccagt cgaaactgag gttcacgaac gccatagagc tgtgagcttc gcccaaggtg
     1201 tcatccagct ccagcgctcg cctggccgcc gccgccgccc tggaggatgc ttcgcgtggc
     1261 gggagcacgc cggcttccca gctgccgagc gtgctgtagc aatcggccag gccgctatag
     1321 gccatcgcgt actccggatc gatcgcgatg gccttctcga agtactcgat cgcctttgcg
     1381 gtccccaggg gccggttatt ccagtgatag cgccctttga ggtaggcgtt gtacgcgtca
     1441 gggttgtcgg tgtggcgctt gaggagcgtt ttctgccgtt caggagtcag ctggatttga
     1501 agcgcctgca cgatggtttg ggagatctcg tcctggattg caaagacgtc cgccatgtca
     1561 cgatcatagc gctcggacca gaggtgatag ccgtcggccg cattgatgag ctgggcagtg
     1621 attcgaaggc ggttgccggc cctccgcacg ctgccttcca gcacggtccg cacgttgagc
     1681 gtctgcccga tcgagcgcgt atccgtcttc gttcccttga aggcaaaggc tgaggttcgc
     1741 gaggcgacgt gcagtccctt gatgctgctg agaaggttga tcagttcttc ggcgatccca
     1801 tcaccgaagt actcgttgtc gggatcgccg ctcatgttga ggaacgacag cacggcaatg
     1861 gactccgccg gaggtgtggg ccggagcacc gccgtcgcct ggggcccgct caccggtgtc
     1921 gtctcgagtg cctggatgaa ctgggccgcc gtggcgtaac gatcgaccgg cgccttggct
     1981 agcgctcgta ggagggcctg ctccagtgcg actggcacgg ccgcccggac ggtgcgggga
     2041 gacggcaccg gatccatgac gtgacgagcc aggatctgct gcgcgttgtg gcccaggaac
     2101 ggcggatcgc ccaccagcat ttcgtacagc atacacccca ggctatacag atcgctctgg
     2161 gcatccacgt cgttgcctcc gagcgcctgc tcgggactca tgtatgacgg agtgccgagc
     2221 gaaaggccca cctcggtcag ctgctcgcca cccgccgcag tgatcgcgcg ggcaatgccg
     2281 aagtcggcga ccaccgcgtg gttgtgggaa agcagaatgt tcgcgggctt tatgtcgcgg
     2341 tgtacgaagc ccaaacggtg agcgtatccc agcgcctccc ccacctcgcg ggtgatccgc
     2401 accgcgtcct cgatcggcag ctgccgctcc cggtcgagtc gttggcgcag ggactcgcct
     2461 tcgatatagg gcatgacata gtagagcagt ccgttggaac tgccggaatc gaagagggga
     2521 agaatg
//
LOCUS       DASRPQ010000547         1018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4451315, whole genome shotgun sequence.
ACCESSION   DASRPQ010000547 DASRPQ010000000
VERSION     DASRPQ010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4451315"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..768
                     /locus_tag="VFD73_06530"
     CDS             <1..768
                     /locus_tag="VFD73_06530"
                     /inference="COORDINATES: protein motif:HMM:NF013717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HZI73674.1"
                     /translation="DTRQFPEVLLSMAMAQQLGGALAVSFPFQSYPEMLQDAMRKRIG
                     SSKGVDFDAVWVELLRHGGLFDAKPDRNKGRDTGYRWNRGATPPVPGEPRFSGDGKQF
                     PLHLQIYPSTAFYDGRGAVLPWLQQLPDPMTTVVWDSWIEINPKTAAELGIGFGDLVE
                     VTSPQGSLRLPAVIYPGIRPDMVAIPMGQGHRGGGRYAKGRGANPLALVAATIAGEKP
                     RPAWNATRVRLTRISEKGELVTAGHPQGSFSGELIEI"
BASE COUNT          183 a          323 c          339 g          173 t
ORIGIN      
        1 gatacccgcc agttccccga ggtgctgcta tccatggcca tggctcagca gctgggcggt
       61 gcgctggcgg tgtccttccc cttccagtct tacccggaga tgctccagga cgcgatgcgc
      121 aagcggatcg gctcatcgaa gggggtggat ttcgacgcgg tctgggttga gctgctcagg
      181 cacggtgggc ttttcgatgc gaaaccagac cggaacaagg gccgggacac gggatatcgc
      241 tggaatcggg gcgcaacgcc gccagtgccg ggagagcccc gcttttccgg ggacgggaag
      301 cagttcccgt tgcacttgca gatctacccc tccaccgcct tttacgacgg ccggggggct
      361 gtgctccctt ggctgcagca gcttcccgac ccgatgacca ccgtggtatg ggacagctgg
      421 atcgagatca acccaaagac cgccgccgag ctggggatcg gcttcggcga tctggtcgaa
      481 gtgacctccc cgcaagggtc gctccgcctg ccggcggtta tctaccccgg catccgcccg
      541 gacatggtgg cgatccccat ggggcagggg caccggggag gagggcgcta tgccaagggg
      601 aggggagcga accccctggc gctggttgct gctacgattg cgggagaaaa gccccgaccg
      661 gcctggaacg ccacccgcgt acggctgacc cggatctcgg agaaagggga gctggtgacg
      721 gccgggcatc cgcagggaag cttcagcggc gagctgatag agatatgaca aacggttaat
      781 gtgggcaatt ccttcagcta accgggtgcg agatttcggc cagatcgtcg ccggcccgca
      841 agaagcttcg ctgaggcgta gcagcgctac gtcgaagcgg ggcttcgagg acacggcggc
      901 gagatggtcg gaagatcgcc cccgccccct aagtattctg ttccgacacc cctgcttcgt
      961 cgaacgtcgc catctccttc aacaccttca ccccggcctc gatcagcccc atggccag
//
LOCUS       DASRPQ010000548         1014 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4451662, whole genome shotgun sequence.
ACCESSION   DASRPQ010000548 DASRPQ010000000
VERSION     DASRPQ010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4451662"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..193
                     /locus_tag="VFD73_06535"
     CDS             <1..193
                     /locus_tag="VFD73_06535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73675.1"
                     /translation="AEPRFLRPGGDEDEILARLRRQQARVAESYRAVNDLLGERLRRE
                     LDRRSLAGESLQGAEGHKP"
     gene            complement(335..772)
                     /locus_tag="VFD73_06540"
     CDS             complement(335..772)
                     /locus_tag="VFD73_06540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73676.1"
                     /translation="MRQRSHRRNLVVWSQSAGSVGKYGAPPFTRRRRIRRWIRTGALL
                     TVVGLMPLARAVRARWRPLLAGAVLTMVGIIWLDGPGGLVLLPGLWLLLSAPLIPASP
                     KADRMRRPEVELERAVFSHPAQRRLAIQAMAAHDKRFPVTGRY"
BASE COUNT          186 a          322 c          327 g          179 t
ORIGIN      
        1 agccgagccg cgcttcctac gtccgggggg agatgaggat gagattctcg ccaggctacg
       61 tcggcaacag gcacgggtag cggagagcta tagagcagtg aatgacctac tcggtgagcg
      121 gctcagacga gaactcgacc ggagatcttt ggctggagag tcactccagg gcgcggaggg
      181 gcataaaccc taaccgcatt agcagctcgg gtcgtcgctg tccggatcgg ttcaggctgg
      241 tccaacgtcc ctgatcggcc tgctctggcc gccgcggcac ggtattggac tgcaacccaa
      301 attacaaccg tgccatccgg ggtggactcg gtacttaata ccgtccggtg actggaaacc
      361 gcttgtcatg tgcggccatg gcttggatgg cgaggcgccg ctgcgccgga tgtgagaaga
      421 cggcccgttc aagctctacc tccgggcgcc gcatgcggtc cgccttaggg ctggccggga
      481 ttagcggggc agacaagaga agccacagtc cgggcaggag aaccagcccg cccgggccgt
      541 cgagccatat gatgccgacc atcgtgagca ccgccccggc cagcaagggc cgccagcggg
      601 cccgcacggc gcgggccagg ggcatcaggc cgacgacggt gaggagcgcg ccggtacgga
      661 tccacctgcg gatccgcctt ctccgcgtga acggcggagc gccgtacttg ccgactgaac
      721 ctgcggactg gctccacacc acaaggttcc gccgatgcga tcgctgtctc atcgcagccc
      781 cctgccatcc aaggctccgc tctgcgtgtc ctcaatggta cgcttctgcg ctgttcagga
      841 gcgtcccgcg cagagcggtt ggcgcctcgg ggccatgtcc ctggagatgg tgtatgaaat
      901 ggccacctcg cgacctgtat ctatttaagc gggaattgcc tctactgtca attcagcctc
      961 actagttata ttctgctcca tagcaccctg aacggctttc cggcacgcgg cgag
//
LOCUS       DASRPQ010000549         4733 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4451670, whole genome shotgun sequence.
ACCESSION   DASRPQ010000549 DASRPQ010000000
VERSION     DASRPQ010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4733
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4451670"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..582
                     /locus_tag="VFD73_06545"
     CDS             <1..582
                     /locus_tag="VFD73_06545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73677.1"
                     /translation="AGELAVLRLEGAPWFVQRNILFLLGRLGSWPEGFSPHAYAESPD
                     PRIRREAIKLLLDSPAHQPHTILRGLADADEGIVALSLAAALDSCPADALSLVHSIAV
                     DAKRPAEVRVLAVRILARSKSPASVEVLQSLVLHRRRWFGRRLAPKSPELLAALSGLA
                     THWREHPVAAEVLAHAMQHADPEIRAAASSAPA"
     gene            579..1730
                     /locus_tag="VFD73_06550"
     CDS             579..1730
                     /locus_tag="VFD73_06550"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HZI73678.1"
                     /translation="MTDPLRFLTAFSQTLSTLGLYGDEHPATQRAIDSALERLHELQS
                     SDPKLQFTFLTGEVLFGTETVPSLESWEWCTRFIKAGIERIEFTERVQPDEFIRFLAH
                     LAVRLGIRSSATTDLWQMGDSAIRFGQITVGEASVPVRKEQLAVAALTYSLREERETI
                     DWLHQEIQSGAKLPMVEADAVVRSLSIAMHAEQAMMLPLLQLKEFDQYTTTHSMNVAV
                     LAMALAEYLELGGESVRALGVAGLLHDLGKVCIPKDILTKPGKLSETERDVIREHPVV
                     GARMLLASPDPLDLAAVVAYEHHIMLDGGGYPHLHDARGAQYASRLVHVCDVYDALRT
                     NRPYRHAWESERTIAYIEGRAGAEFDPAIARSFTAMMRKWDHRIAVVSI"
     gene            complement(1678..2736)
                     /locus_tag="VFD73_06555"
     CDS             complement(1678..2736)
                     /locus_tag="VFD73_06555"
                     /inference="COORDINATES: protein motif:HMM:TIGR04018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YpdA family putative bacillithiol disulfide
                     reductase"
                     /protein_id="HZI73679.1"
                     /translation="MSVESVDLLVIGAGPCGLAVGVAAKQAGIPCVLLDRRTIVSTIE
                     RYPLSMTFFSTPERIEIGGVPFIASHEKPNRRDGLIYYRRVAEHYQLDIRPGEDVVDV
                     IRETGGTSDDGFRIEVSRAHDSKTYLAKAIVFATGYYDNPNFLGVPGENLPHVFHYFV
                     EGHPYWHRQVIVIGAGNSSVDAALECWRAGAAVTLVHFGEGFDRTVKAWVLPDIVNRV
                     KEGSIGVRWRSRIRAITPTHVDVVSEVTGRSDLLPADAVLAMTGYHADTTLLQKIGVP
                     VDPSSGVPAHDEATMATPVAGCYLAGVIASGNDANRLFIENARGHGDLIVRHLLQTRS
                     GVRSTPLQSGDPISASWR"
     gene            complement(2801..4081)
                     /locus_tag="VFD73_06560"
     CDS             complement(2801..4081)
                     /locus_tag="VFD73_06560"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HZI73680.1"
                     /translation="MFDSKTGCVVVVGAQWGDEGKGKLVDVLAERADLVVRYQGGANA
                     GHTVVIGDTQFILRQIPSGILHPKVTCVIGNGVVLEPENLFSELDGLQERGIDTAGRL
                     VISDRAHLVLPYHKLLDAASEKSQKLGTTGRGIGPAYEDKYGRRGIRVVDLRRLECAR
                     SLLSDRVTRANQLLELMGSSASASLEEHVTLLERLAPRLLPLAADAGQVVDRAIRDGR
                     RVLLEGAQGALLDVDHGTYPYVTSSNTTAGGAAVGSGIGPTRIGGVLGVVKAYTTRVG
                     NGPLPTEAASPHGERLRELGGEFGAVTGRPRRCGWFDATVVRYAARVNGLTGLAVTKL
                     DVLDSFATIPVGINYRLDGAMCEEVPAEAEALARVQPVYEEHPGWEQSTGGARRLADL
                     PRAARAYLDRLESLSGVPVRYVSVGTRRDQIIEV"
     gene            complement(4168..>4733)
                     /locus_tag="VFD73_06565"
     CDS             complement(4168..>4733)
                     /locus_tag="VFD73_06565"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HZI73681.1"
                     /translation="GPLRPVWLMLGLAPAVLAGVLAGRGRLRGTSVGARDNASGVVAA
                     LVAAERSQDVGTGVLITSAEEFGLVGGRVFARLTPNVQDMEFINLDTLDQEGTLYVVS
                     HDAKGHSFGRELESRLAALDLPIQHRRLPWGIFVDSAAFARAHARSVTLGRLTWATLR
                     RIHTPDDTAQDLSLSTAEQIGRAIVSN"
BASE COUNT          852 a         1602 c         1452 g          827 t
ORIGIN      
        1 gccggcgagc ttgcggtcct ccggctcgag ggtgctccct ggttcgtcca gcgcaacatc
       61 ttgttcctgc tcgggaggct ggggagctgg cccgaggggt tctccccgca cgcctacgcg
      121 gaaagtccgg atccgcgcat ccgccgcgag gccatcaagc tgctgctcga ctcgcccgcc
      181 catcagccac acacgattct gcgaggcttg gcggatgctg atgaagggat tgtagcgctc
      241 tcgctcgccg ccgccctgga ctcgtgtccc gccgacgcgc tgagcctggt ccacagcatt
      301 gcggtggatg ccaaacgacc cgccgaggta cgggtactgg cggtacgcat tctggcccgc
      361 agcaaatccc cggcgagcgt cgaggtgctg cagtcgttgg tgctacaccg gcggcgctgg
      421 ttcggccggc gcctcgcccc taaatcgccg gaactcctgg ccgcgctctc aggtcttgcc
      481 acgcactggc gcgagcaccc ggttgcggca gaggtcctcg ctcacgccat gcagcatgcg
      541 gatccggaga tccgagcggc cgcgagctcg gcgccagcat gaccgacccg ctccgttttc
      601 tgacggcgtt ctcccagacg ctctcgaccc tgggacttta cggagacgaa caccccgcca
      661 cccagcgcgc gatcgacagc gccctggagc gactccacga gcttcaaagc tccgacccga
      721 agttgcaatt caccttcctc accggcgaag tcctgtttgg cacggagacg gtgcccagcc
      781 tggagagttg ggaatggtgt acccgtttca tcaaagccgg gatcgagcgc atcgagttca
      841 ccgagcgggt acagcccgac gagtttatca ggttcctggc tcacctggcg gtgcgcctcg
      901 gcattcgcag ctctgctacg acggacctgt ggcaaatggg tgactcggcg attcgcttcg
      961 gacagatcac ggtgggagag gcatcggttc cagtgaggaa agaacagctc gccgtggccg
     1021 cgttgaccta cagtcttcgg gaggagcggg aaacaatcga ttggctgcac caggaaatcc
     1081 agagcggcgc caagcttccc atggtggaag cggacgcagt ggtgcgctcg ttgtcaatcg
     1141 ccatgcacgc cgagcaggcg atgatgctcc cgctgctcca actcaaggag ttcgaccagt
     1201 acaccaccac ccattccatg aacgtggcgg tgctggcgat ggcgctggca gagtacctgg
     1261 agctgggcgg cgagagcgtt cgtgccctcg gagtcgccgg gctattgcac gacctgggca
     1321 aggtctgcat cccgaaggac atcctcacca agccgggcaa gctcagcgag accgagcgcg
     1381 acgtgatccg cgagcatcca gtcgtgggcg cacgaatgct cctggccagt cccgacccct
     1441 tggacctggc ggcagtggtc gcctacgagc accacatcat gctcgatggc ggcgggtatc
     1501 ctcacctcca cgacgccagg ggcgcccagt acgccagccg cctggttcat gtctgtgatg
     1561 tctatgatgc cctgcggacc aatcgacctt accggcacgc ctgggaatcg gaacggacga
     1621 tcgcctatat cgaaggccgc gccggggcgg agttcgatcc ggccattgcc cgatcgttca
     1681 ccgccatgat gcggaaatgg gatcaccgga ttgcagtggt gtcgatctga cgccggatcg
     1741 ggtctgcagc aggtgccgga cgatcaaatc accatgccct cttgcgttct cgatgaagag
     1801 ccgattggcg tcgttgccgc tggcgatcac accggcgagg tagcaaccgg cgacgggcgt
     1861 ggccatcgtc gcttcatcat gggccggcac tccactcgac ggatccactg ggaccccaat
     1921 cttctgcagc agagtggtgt ccgcgtgata gccggtcatc gccagtaccg catccgccgg
     1981 aaggaggtct gaccgacccg tcacttcgga gacgacgtcg acgtgggtcg gagtgattgc
     2041 ccggatccgc gaccgccaac gaacgccgat gctcccttcc ttgacccgat tgacgatatc
     2101 cggcagtacc cacgccttga cggtacgatc gaatccttcc ccaaaatgaa ccagcgtgac
     2161 ggccgcgccg gcgcgccagc actcgagggc ggcatcgacg ctgctgttcc cggcgccgat
     2221 cacaatgact tggcggtgcc agtaggggtg tccctcgacg aaatagtgaa agacgtgggg
     2281 gaggttctcg cccgggaccc cgaggaaatt gggattgtca tagtagccgg tggcgaacac
     2341 aatcgccttg gccaggtagg tcttgctgtc gtgagcccgg ctcacctcaa tacgaaaccc
     2401 atcgtcactt gtccccccgg tctctcggat gacatccacc acatcttcgc ctggtcgaat
     2461 gtccagctga taatgctccg ctacccggcg gtagtagatc agtccgtcac ggcggttggg
     2521 tttctcgtga ctggcaatga acggcacgcc gccgatctcg atccgttccg gcgtggagaa
     2581 gaaggtcatg ctcaaggggt agcgctcgat ggtcgagaca atcgtgcggc ggtcgagcag
     2641 gacgcacggg atgccagcct gcttggcggc cactcccacg gccaacccgc atggcccggc
     2701 cccgatgacc agtagatcga cggactctac actcatatca ctcccaatta acatcttccc
     2761 cactccatgc ttccggcttc cctgcttccc gctttccggc tcagacttct atgatctggt
     2821 cccgacgggt cccgacactg acgtagcgca ccgggacccc ggagagcgac tcgaggcggt
     2881 cgaggtacgc cctggccgcc cgcggcagat cggccaaccg tcgggcgccg ccggtggact
     2941 gctcccagcc agggtgctcc tcatagaccg gctggacccg ggcaagcgcc tcggcctctg
     3001 ccggcacttc ctcgcacatc gccccgtcca ggcgatagtt gatgccgacc ggaatcgtgg
     3061 caaacgaatc gaggacatcg agcttggtaa ccgccagccc ggtcaggccg ttcacccgag
     3121 cggcatagcg gaccaccgtt gcatcgaacc agccacaacg gcggggacgt ccagtcaccg
     3181 ccccgaattc gcctcccagc tcacgcagac gctcaccatg gggacttgcc gcttccgtgg
     3241 gcagcggacc gttgcccacg cgagtggtgt aggccttgac gacgcccaga acgccgccga
     3301 ttcgagtggg tccgatgccc gagcctaccg ccgcgccgcc tgcggtggtg ttggaggatg
     3361 tcacataggg ataggtcccg tggtcaacat ccagcagcgc gccctgcgcc ccttccagca
     3421 gcacccggcg cccgtcccga attgcccggt cgaccacctg ccccgcgtct gcggcaagcg
     3481 gaagcagccg gggggcgagc cgctccagca acgtgacgtg ttcttccagg ctggccgacg
     3541 ccgagctccc catgagctcc agaagctggt tggcgcgcgt cactcggtcg ctcagcagcg
     3601 agcgggcaca ctcgagccgg cgcaagtcaa ccacccggat tccccgccgt ccgtacttgt
     3661 cctcatacgc cggccctatg ccacgaccag tggtgccgag cttctggctc ttttcgctgg
     3721 ccgcatccag aagcttgtgg tagggcagca ccagatgagc tcggtcagag atgaccaggc
     3781 gaccggcagt atcgatcccc cgttcctgca ggccatcgag ctcggagaac aggttttccg
     3841 gttcgagcac cactccattg ccgatcacgc aggtgacctt tgggtgcaga atccccgagg
     3901 ggatctggcg caggatgaac tgcgtgtcgc cgatgacgac ggtgtgtccg gcgtttgccc
     3961 caccctggta gcgaaccacg agatcggccc gttctgccag gacgtcaacc agcttccctt
     4021 ttccctcgtc tccccactgc gccccaacta ccacgacgca gccggttttc gagtcgaaca
     4081 tctcggctcc ctggttgaaa acaacaaaag agcccctcgc ggggctcctg catcctcggg
     4141 caaagctatc gcgcgtcgaa ggaaaggtca attcgacacg atggctcttc cgatctgctc
     4201 ggcggtggaa agcgagagat cttgtgcagt gtcatcgggc gtgtgaattc gccggagtgt
     4261 tgcccaggtg agccgcccca aggtgaccga tctcgcgtga gcccgcgcaa acgctgcgct
     4321 atccacgaag atgccccagg gaagtcgccg atgctgaatg ggcaggtcga gagcggcaag
     4381 gcgcgactcc agctcgcggc cgaaactgtg gcccttggcg tcatggctta cgacgtagag
     4441 cgtgccctcc tggtccaggg tatccaggtt gatgaactcc atgtcctgga cgttcggcgt
     4501 cagcctggca aagactcgtc cgcccacgag tccgaactcc tcggcactgg tgatcagaac
     4561 cccggtcccc acgtcctggc tccgctcggc ggcaacgagg gcagctacga cgccgctcgc
     4621 gttgtcccgc gcaccgacag acgttccccg aagccgacct cgtccggcca gcacaccggc
     4681 tagaacggcg ggcgccaacc ccagcatcag ccaaaccggt cgtaacgggc cct
//
LOCUS       DASRPQ010000550         1082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2256585, whole genome shotgun sequence.
ACCESSION   DASRPQ010000550 DASRPQ010000000
VERSION     DASRPQ010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2256585"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(47..289)
                     /locus_tag="VFD73_06570"
     CDS             complement(47..289)
                     /locus_tag="VFD73_06570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73682.1"
                     /translation="MFHSDGYRGFNRVRAQLADGDHWYEYPRYLFTNESADILRLCGE
                     ALDQLGVAWRYSRRNSISVARREAVARLDELVGPKY"
     gene            complement(410..571)
                     /locus_tag="VFD73_06575"
     CDS             complement(410..571)
                     /locus_tag="VFD73_06575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73683.1"
                     /translation="MLPEPQADYAYLLGLYLGDGCISLAGARDKEVWKLRIACADTWP
                     ASGASASGL"
     gene            complement(798..874)
                     /locus_tag="VFD73_06580"
     tRNA            complement(798..874)
                     /locus_tag="VFD73_06580"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(835..837),aa:Leu,seq:caa)
BASE COUNT          213 a          353 c          334 g          182 t
ORIGIN      
        1 cgacccggcg aactggccct aaccggccag ccgttcgcaa acatcatcag tacttggggc
       61 cgacgagctc gtcgagccgt gccaccgcct cgcgccgcgc caccgagatc gaattgcgcc
      121 gggagtaacg ccaggccact ccaagctgat ccagcgcctc accgcacagc cggagaatat
      181 ccgcggactc gttcgtgaac agatatcgcg gatactcata ccaatggtcg ccgtccgcga
      241 gctgcgcccg cacccggtta aagccgcggt aaccgtccga gtggaacaat ccgcgggcaa
      301 gcggcctgca ttagccgtga caatggtgcg ctgccacggt tgcaactgat cacttcggtg
      361 catccgacct gctgctgggt acggaccttg ttgcccggcc gtacggcgct catagcccgc
      421 tcgcactcgc accggaggca ggccaggtat ccgcgcacgc gatgcgcagt ttccacacct
      481 ccttgtccct cgcgccggcc aggcttatgc agccatctcc caggtagagg ccgagcaggt
      541 aagcatagtc ggcctgcggt tcgggcagca tcggactagg ggcgcaccgc gggcagacgg
      601 cgcgaggatt agtgctgact ggatgctcac gccagtcgcg caacgttgca cgtgaaattc
      661 cggtcgacag gctgatactg cgcatactaa taccgcagcc catcagcgca accgcatggc
      721 gacgtatgtc agcgctatac acaatcccag tatcgcaggc ggcactgaca attctgagca
      781 gcagaattgc ttacaggtgc cccgggtggg agtcgaaccc acactgtacg ggttttgaat
      841 ccgctctctc taccgcagat tggagtaccg gggcgccgct ccgccactag gggagcgaga
      901 tgacaatcta cctgatcacg gtacgctcgt gggcatgagc gagaacccgc tgcgtgtcgt
      961 gatcgccgag gatgaggccc tgatccggct cgacctcaag gagatgctgg aggaagaggg
     1021 ctactcggtc gtcgccgagg cgggcgacgg tgagtcggcc gtcgagcacg tcgccacgct
     1081 gc
//
LOCUS       DASRPQ010000551         1028 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1317119, whole genome shotgun sequence.
ACCESSION   DASRPQ010000551 DASRPQ010000000
VERSION     DASRPQ010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1317119"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1004)
                     /locus_tag="VFD73_06585"
     CDS             complement(<1..1004)
                     /locus_tag="VFD73_06585"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HZI73684.1"
                     /translation="MALVLGTWAYMQLRAGLPRLEGSIAAPELSAPVTVARDAHGVPT
                     LTGHTRADLAWALGYLHGQERFVQMDGQRRTAAGELSDLVGRAALKRDRTVRLHRFRH
                     RAAAVLAAMSSDERRVLDAYVAGVNRGFGDLGAVPFEYVLLRAKPQPWTAEDTVLTVF
                     AMYVSLQETDGITERQRSNAREVLGQPLADFLFPEGTSWDAPLDGSSLPTPAMPSTGL
                     RKAAAPVTRVGEVEPDISGSNAFAVGGALGSSGAAIVANDMHLGLRVPNIWYRARLVL
                     DDGSGRPTLDITGITLPGAPTIVAGSNGRIAWGFTNSYVDASDVVVLEPVDGNPNLYR
                     T"
BASE COUNT          184 a          333 c          354 g          157 t
ORIGIN      
        1 gtgcgataca ggttcgggtt gccgtccaca ggctcgagca caaccacgtc gctggcatcg
       61 acatagctgt tagtgaaccc ccaggcgatc cggccattgc tgccggccac gatggtcggt
      121 gcgcccggta gagtgatgcc cgtgatgtcc agggtgggac ggcctgagcc atcgtccagc
      181 acgagcctgg cccggtacca gatattcgga acacgcaagc ccaggtgcat gtcgttggcc
      241 acgatcgcag ccccgctgga gccgagtgca ccgcccacag cgaaagcatt gctgcccgag
      301 atatcaggct caacctctcc cactcgggtg acaggagctg ccgctttcct caatccggtg
      361 gagggcatcg cgggcgtggg caagctggag ccgtccagcg gcgcatccca ggacgtgccc
      421 tccgggaaca agaagtcggc caggggttgg ccgagaacct cgcgggcatt gctacgttgg
      481 cgctcggtga tcccgtccgt ctcctgcagg ctgacgtaca tggcaaagac cgtcagcacc
      541 gtatcctcag cggtccaggg ctggggcttg gcacgcagca gcacgtactc aaagggcacg
      601 gcacccaagt cgccgaagcc gcggttcacg cccgcgacat aggcgtccag cacgcggcgc
      661 tcatcagagg acatcgcggc caggactgcg gcagcgcggt gccggaagcg gtgcaggcgg
      721 acggttcggt cccgcttgag ggcggcgcgc ccgacaaggt cagagagttc gccggctgcg
      781 gtgcggcgct ggccatccat ttggacgaag cgctcttgcc catgcaggta accgagagcc
      841 caggcgagat ctgcgcgggt gtggccggtg agcgtgggca cgccgtgggc gtcacgggcc
      901 acggtgacag gcgcggacag ctcaggtgcc gcgatgctgc cctccagcct cggtaggcct
      961 gcgcgtagct gcatgtaggc ccaggtgcca aggacgaggg ccatgctgat aaccatgccc
     1021 aagctcac
//
LOCUS       DASRPQ010000552         1466 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4452058, whole genome shotgun sequence.
ACCESSION   DASRPQ010000552 DASRPQ010000000
VERSION     DASRPQ010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1466
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4452058"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..387)
                     /locus_tag="VFD73_06590"
     CDS             complement(<1..387)
                     /locus_tag="VFD73_06590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73685.1"
                     /translation="MQRSFLWALAALLPFTVNAQTIGQSVARTSNGTVRLSFPARPGV
                     CGNGADNISTRRTDEEWESDCEAGPVRVALRVSHSRVLGLRTYVGGRWRQLPDVTDLG
                     IVRPQAAAEYLLSLARLPENLDGDPLL"
     gene            complement(394..1254)
                     /locus_tag="VFD73_06595"
     CDS             complement(394..1254)
                     /locus_tag="VFD73_06595"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HZI73686.1"
                     /translation="MKVAALNALQQMDAAKARPILRRLLARRDAGTACLRRKAVFLIA
                     QQNQPGTEDILLESVRSDPDLEVRRQAVFWLSQVGTDRAVVALDSILRFSNDREIQEK
                     AVFALSQHESPRAQQALRSYAERTEIPEALRERAIFWLGQRQTPENAAFLRTLYAKLQ
                     SRELKKKVLFSLSQMGGEENGRWLLGVAGDSSQTVEMRKQALFWAGQSGVSIDALTKL
                     YSRVTDREMRRQLVFVYSQRDEPAALDKLIEIAKSDPDPELRKRALFWLGQSDQARAV
                     QAIQDIIDQP"
BASE COUNT          247 a          464 c          484 g          271 t
ORIGIN      
        1 aagcagggga tctccatcca agttctccgg gagccgggcc aaactcagga gatattcggc
       61 ggcggcttga ggccggacga tgccgagatc ggtaacatcg ggcaactggc gccaccttcc
      121 cccaacgtag gttcggagcc cgagcacccg gctgtgactc acccgcaagg caacccgcac
      181 cggtccggcc tcgcagtccg actcccattc ttcatcagtc cgacgggtgg aaatgttatc
      241 ggcgccgttt ccgcagactc cgggacgcgc cggaaaactc aggcgaacgg ttccgttaga
      301 ggtgcgggcc acactctggc cgatggtctg ggcgttcacc gtgaacggca gcagcgcggc
      361 gagcgcccat aggaaggatc gctgcatggt ccgctatggc tgatcgataa tgtcctgaat
      421 ggcctgaacg gcgcgggcct ggtccgactg tcccagccag aagagagcgc gttttctgag
      481 ctcggggtcg ggatcgctct tggcgatctc gatcagcttg tccagcgccg ccggctcgtc
      541 gcgctgagag tacacgaaca ccagttgccg ccgcatctcg cgatcagtga cccggctgta
      601 gagcttggtg agcgcatcga tggacacacc ggactggccg gcccaaaaga gtgcctgctt
      661 ccgcatttcc accgtctgcg acgaatctcc ggctacgccg agcagccagc gaccgttttc
      721 ttccccgccc atctgcgaca aggaaaagag cactttcttc ttcagctcgc ggctctgcag
      781 ttttgcgtac agtgtgcgga ggaaggcggc gttttcgggt gtctgccgct gccccagcca
      841 gaagatcgcc cgctcacgca atgcttccgg aatctcggtg cgttcggcgt aactcctgag
      901 cgcctgctgg gcccgggggc tttcgtgctg cgacaaggcg aacaccgcct tctcctggat
      961 ttcccgatcg ttggagaaac ggagaatcga gtccagcgcc acaacggccc gatcggttcc
     1021 gacctgggag agccagaaca cggcctgccg tctcacttcg aggtccgggt cgctgcgcac
     1081 cgattccagc agaatgtcct cggtgccagg ctggttctgc tgcgcgatca ggaacacggc
     1141 cttgcgtcgg agacaggccg ttccggcgtc gcgccgcgcc aatagccgcc gaagaatggg
     1201 gcgggccttg gcggcgtcca tctgctgcag cgcgttgagg gcggcgactt tcatgtcgtc
     1261 actgtcacca ctgcacgagc tatacgtcgg cggcgttggg ggcgtcggcg gagtaggtgg
     1321 cgtcggcgga gtaggaggcg tcggcggggt tggaggtgtc ggcggggttg gaggcgtcgg
     1381 gtagctggtt gagctggagc tcgacgagga actcgccgcc gacgatgcct cccgcgccac
     1441 ctgctccgca gcttcagggt ctcccc
//
LOCUS       DASRPQ010000553         1098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1630906, whole genome shotgun sequence.
ACCESSION   DASRPQ010000553 DASRPQ010000000
VERSION     DASRPQ010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1630906"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(172..336)
                     /locus_tag="VFD73_06600"
     CDS             complement(172..336)
                     /locus_tag="VFD73_06600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73687.1"
                     /translation="MDQDIASLRRMIEEIRQIRERTCDPKSNQNPRYHALSSAVSSLD
                     KAAKDMSARP"
     gene            complement(344..817)
                     /locus_tag="VFD73_06605"
     CDS             complement(344..817)
                     /locus_tag="VFD73_06605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73688.1"
                     /translation="MNRITEIVRRLLAGGVLAGLLFSGAVVAEGSAGAATTPVLYSAN
                     NLPWSASRHPSRFVFGNGGSPYFTNLTWKSWGSGSAWGTGKVWTQKAGCSPSYKCAYT
                     SRWVGVYLSAVKTHNGTRYYSKMSVELSVSGKLRWESGTYQSGWWGHFPNVWPWF"
BASE COUNT          180 a          365 c          355 g          198 t
ORIGIN      
        1 cgtccaggcg gagcaggtcg gccagggaga tgtgcaccca cgccttgacc ggctgcccgg
       61 cccgctccgg caccaggttc gccgcggtca gccgccgcat gcgccaattg ggcttttgca
      121 tcgtgagttt ggccacatcg atggtgacgc gcacccggca gcgatagggc cctagggacg
      181 tgcggacatg tccttggctg ccttgtcgag cgagctcacc gcagacgaga gcgcgtggta
      241 gcgcggattc tggttggact tcgggtcgca ggtacgctcc cggatctggc ggatctcctc
      301 gatcatgcgc ctcaggctgg caatgtcctg gtccatggcg gggctagaac catggccaga
      361 cgttggggaa gtgaccccac cagcctgact ggtaggtgcc ggactcccac ctcagcttgc
      421 cgctgaccga gagctccacc gacatcttgc tgtagtagcg cgtgccgttg tgggtcttga
      481 ccgccgacag gtacacgcct acccagcggc tggtgtaggc gcacttgtag ctcgggctgc
      541 accctgcctt ctgggtccag accttgccgg ttccccaggc cgagccgctg ccccacgact
      601 tccaggtcag gttggtgaag tagggcgagc cgccgttccc gaagacgaac ctcgagggat
      661 gccgggacgc cgaccagggg aggttgttcg ccgagtaaag cactggcgtc gtggctgcgc
      721 cggccgatcc ctcagccacc accgccccgg agaacagcag cccggcgaga acgcctcccg
      781 ccagcagcct cctgacaatc tccgtgatcc tgttcactgt gctcccccct gctctagctg
      841 actctcgcgt accgtggttc cgtcagcttt ccagaagtct aggtccgcta ctgcgcggcc
      901 tctaccgtcg ccagataagg ccaggaagat cgccgagggg cgagctcccg gcgggcaact
      961 cgtggcggtc taccctgcca ggctgaggtg gctccgggcg aatgatgccg accggggcag
     1021 ccgaagatga ttccgcgccg gaagatcgga taacggaccg ttatcacgtc ttagagcctg
     1081 cttgagaact catgcggc
//
LOCUS       DASRPQ010000554         1234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2582920, whole genome shotgun sequence.
ACCESSION   DASRPQ010000554 DASRPQ010000000
VERSION     DASRPQ010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1234
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2582920"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            511..>1234
                     /locus_tag="VFD73_06610"
     CDS             511..>1234
                     /locus_tag="VFD73_06610"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HZI73689.1"
                     /translation="MIDPGEYAALASCTYLNQASLGLIPRTSLEASVRFLTEVAQHGN
                     LRLSDQAEARVLDGLRTAAAELLGAPVPSVAVVGGASEGLGQLAALLSSAGGEVVLVA
                     SDFPSVTYPWLAARDRLGMRIRWVADTPARDLTLSLGDAISERTTVVCISAVQFATGS
                     LVDVSALVARARDVGARVVVDVTQLAGAAPVTMTQWGVDALVCSGYKWLSAPAGVALL
                     AVTENLAAATPVIVGWKGSATPF"
BASE COUNT          172 a          377 c          449 g          236 t
ORIGIN      
        1 cgcagccacg tccgctgggg cgacgggcag gccgagaact tcagcataga aacctgccag
       61 cgctgcgggc tgccggcagt ggatgacaat ggcgtccaga tgtggcacca gttcctcctc
      121 gcccaggccc gcttggctgc gccaggatag cctgccctgc ggtttccccg gcttcgatgc
      181 cgcgagttga tgatcactac catccagcat gcgggctagc tcgctttccg ctgcgggccc
      241 tgggacttga ctggctagtc gcggcgggga tatcgccgac gcctgcgggg cagagacgat
      301 ctgtaccggt ccgctttcct gtctaacaaa ggacgcagca gcgcacaggg ggcccggaaa
      361 gttgcggttt caattatttc ctgtctgtac ggtagccctg atcctgggtg gcttttcggc
      421 agagggagat cagatgaacc ggccgctcgc gtgcgctgcc gcagtgactg cgctgatgcg
      481 ggctggcggc gaaggaggat tgtggacccg ttgattgacc cgggggagta tgcggcgctt
      541 gcctcttgca cctatttgaa ccaggcttcg ctggggctga tacctcgcac ctcgctggag
      601 gcgagcgtcc ggttcttgac cgaggtggcc cagcatggca acctccgcct gtccgaccag
      661 gccgaggcga gagtcttgga cgggctgcgg acggccgcgg ctgagctact cggcgcgccg
      721 gtgccgtcgg tcgcggtggt gggcggggcg agcgagggct tgggccagct tgccgcgttg
      781 ttgtccagcg cggggggtga ggtggtcttg gtggccagcg acttccccag cgtgacctac
      841 ccgtggctgg ccgctcggga ccggttgggc atgcgcatcc gctgggttgc cgacactccg
      901 gcccgtgacc ttacgctctc gctgggcgat gcgatcagcg aacggacaac ggtggtgtgt
      961 atcagcgcgg ttcagttcgc taccggcagc ctggtcgatg tcagcgctct ggtggcacgc
     1021 gcccgggacg ttggtgcccg ggtggtggtt gacgtgaccc agctggctgg tgccgccccg
     1081 gtcacgatga cgcaatgggg agtggacgcg ctggtgtgca gcggctacaa gtggctgtcc
     1141 gcgcctgctg gcgttgcgct gctcgccgtt accgagaacc tggcggcggc caccccggtg
     1201 atcgttggct ggaaaggcag cgccacaccg ttcg
//
LOCUS       DASRPQ010000555         1577 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1631161, whole genome shotgun sequence.
ACCESSION   DASRPQ010000555 DASRPQ010000000
VERSION     DASRPQ010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1577
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1631161"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1435
                     /locus_tag="VFD73_06615"
     CDS             <1..1435
                     /locus_tag="VFD73_06615"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HZI73690.1"
                     /translation="VQARTLEIYSHLGIAGKALELGKRTEGADMWADGRRTARIPLGD
                     IGRDLSPYPFVLILGQDDNERLLGELLHQWNLAVEWNTELVGLQQDADHVRARLKDPQ
                     GTIREITARWVGGCDGARSAVRELNGIKFQGAPYEHVFFVADTTMTGPMVPDELNVYF
                     WHDGFHLFFPMRGANHWRIVGIVPPALRGRDDLTINDLMPSIAGEAGAGLSLQACSWF
                     STYRIHHRRAEHFRDHRCFLLGDAAHIHSPVGAQGMNTGLQDAYNLAWKLALVASGRA
                     GEGLLESYEAERIPVARRLLSTTDRMFSLVVSDTRMAGLFRTRILANAIALAIRLESI
                     QKLAFRTISQIGIAYRESPLSETLPEMRNSGVRAGDRFPWLRLRLSPNGPVEDLFAKL
                     DDLCFTLIVIGQPVPSGGVPGLGDLLNILMVPDDAANDREVSRVHIPRPAFYLLRPDG
                     HVGLAGTRLDLAAVTRYLAGHVRIGTT"
BASE COUNT          272 a          499 c          500 g          306 t
ORIGIN      
        1 cgtccaggcg cgcaccctcg agatctacag ccatctaggc atcgccggga aagcgctcga
       61 attgggcaag cgcaccgagg gcgccgacat gtgggcggac ggccgccgca ccgcgcgcat
      121 ccccctgggt gacatcggcc gcgacctgag tccgtatccc tttgtgttga tcctgggcca
      181 ggacgacaac gaacgattgc tgggcgagct cctgcaccag tggaacctgg ccgtcgagtg
      241 gaataccgag ctggttggtc tgcagcaaga tgcggatcat gtcagggcgc ggctcaagga
      301 cccgcaaggc actattcgcg agatcaccgc ccgttgggtt ggtggctgcg acggtgcccg
      361 gagcgcagtg cgcgagttga acggcatcaa gtttcagggc gcgccgtacg agcacgtctt
      421 cttcgtggcc gacaccacca tgacgggccc catggtgccg gacgagctca acgtctactt
      481 ctggcatgat ggattccacc tattcttccc gatgcgcggg gccaatcact ggcgcatcgt
      541 cggcattgta ccgcctgcat tacgcggcag agacgatctt accatcaacg atctgatgcc
      601 gtcgatcgcc ggggaggcag gagccgggct cagcttgcag gcttgcagct ggttttccac
      661 ctaccgcatc caccaccgcc gcgcggagca ctttcgcgac caccgctgct ttctgctggg
      721 cgacgcggcg cacattcaca gtccggtcgg agcccaaggg atgaacaccg ggcttcagga
      781 cgcgtacaac ctggcctgga aattggcgct ggtcgcctcc ggacgagccg gggaaggctt
      841 gctcgagtcc tatgaagcgg agcgaatccc cgtagcgcgc cggctgctca gcacgaccga
      901 ccggatgttc tcgctggtgg tctccgatac ccgcatggcc ggattattcc ggacccgaat
      961 actcgcgaac gctatcgccc ttgcgatacg gctggagagc atccagaagc tcgcctttcg
     1021 caccatctct cagatcggca tagcctatcg tgagagtccg ttatcagaga cgctgccgga
     1081 gatgcgcaac agcggcgtcc gagcaggcga tcgctttccc tggctccggc tccggttgtc
     1141 gcccaatggt ccggtcgagg atctcttcgc caaactcgac gacctgtgct tcacgctgat
     1201 cgtgattggc cagccggttc cttccggcgg cgtgccgggg ctgggtgacc tactgaatat
     1261 tcttatggtt ccggacgacg ccgcgaatga ccgggaggtc agccgggtgc acatccctcg
     1321 cccggcgttc tacctattgc ggccggacgg gcacgtcggg ctggcaggaa cccggctgga
     1381 tcttgcggcg gttacccgtt atctggccgg gcatgtacgc attggcacta cttagccagc
     1441 cgcagcatgc ctcgttctat ggcaacggtg acggctgcgg tgcgatcgtc cacgccgagc
     1501 ttggcaaaga tgtggagcag gtgggtcttg acggtggctt cgctgatgcg gagatccttc
     1561 ccgatgatct tgttgcc
//
LOCUS       DASRPQ010000556         1335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_379787, whole genome shotgun sequence.
ACCESSION   DASRPQ010000556 DASRPQ010000000
VERSION     DASRPQ010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_379787"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..84
                     /locus_tag="VFD73_06620"
     tRNA            1..84
                     /locus_tag="VFD73_06620"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:35..37,aa:Leu,seq:cag)
     gene            697..924
                     /locus_tag="VFD73_06625"
     CDS             697..924
                     /locus_tag="VFD73_06625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73691.1"
                     /translation="MFLTAISTFKEGYGFWDIYRREAVGTTAWRVYLLARFVGGKPAL
                     PAAYGAGAPPALPGGALLLSRSGMGATLRLH"
     gene            1057..1287
                     /locus_tag="VFD73_06630"
     CDS             1057..1287
                     /locus_tag="VFD73_06630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73692.1"
                     /translation="MTRRVRFGHLDGCGQQAGLARESERHPVGMIILLLLLAALVVLG
                     VVLAVAVVKWLFILAVVAALCWLILFFARRTA"
BASE COUNT          203 a          410 c          445 g          277 t
ORIGIN      
        1 gcggatgtgg cggaattggt agacgcgcac ggttcaggtc cgtgtggggg aaaccccgtg
       61 gaggttcaag tcctctcatc cgcatctttg agacgtgcag gcacttcgtc cggttaggga
      121 tccgggctgg tgccccgaag ctctgggctg aagaggccgc ttgaacttgt ctcgtcgcct
      181 gccaacaatg agtttaggcc ggggccgcgg ccatcctctc cccgccgcag tggcgtgtgg
      241 ccggccgcag gggccaaacg ccgggccccg gctcgtacaa atcttcgtac cggctcgcct
      301 tcagcttctt cccccgtagg tccgaccttg cccaaacgtt ttggtggccg tcgcgacgaa
      361 tggcaaaaga gaggttgcct tcgacaagta acaggcgtat cttgctcgtg agccgagtgg
      421 cttcacacct ggcggcaggc gcccaaaacg ctttggggag aggcgtgcgc tcttggggtc
      481 actcggctta tttcgccgcg actcccgcag cattcgtcgc gggcggaacc cggctgcgga
      541 ggccgccgcc tccaggggag aggatatgga ggccgctctt agggtgcgtc cactctagcc
      601 tccgcttacc gggcgatcag caattttacg cctcgcgatg gtggtggccg acgaacggta
      661 gacacctggg agatgcgcct tgcggccttc gctctgatgt tccttacggc catctcgacc
      721 tttaaagagg gttacggatt ttgggacatt taccggcgcg aggccgtagg cacgacggcc
      781 tggcgggtgt atcttctcgc gcgctttgtt gggggcaagc cagccctacc tgcggcatat
      841 ggagccggag cacctcctgc tctccccgga ggggcgctcc ttctgagccg cagcggaatg
      901 ggcgccacgc tccggctcca ctaagtcacc aagggacgcc tttaaccggc aaaaaccagt
      961 agcaacgcca cgtcgtaccg ccctcttgct aggcgagccg agcggagttt gacgggagag
     1021 gcaggctcga ctgtggtcgc tcggctccgc ctagcgatga cgcgccgtgt ccgtttcggc
     1081 catctcgacg gctgtggtca gcaagctggt ttagcgcgtg agtcggagcg gcaccctgtc
     1141 ggcatgatca ttctcttgct gttgctggct gcgctcgtgg tgctcggagt cgtgctggcg
     1201 gtcgctgtcg tcaagtggct gttcattctg gccgtcgtgg cggcgctgtg ctggctcatt
     1261 ctgttcttcg cgcggcgcac ggcctaaagg gtggggaagc cgggatgacc cggcttcccc
     1321 acccgggaac gggtc
//
LOCUS       DASRPQ010000557         1007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2583344, whole genome shotgun sequence.
ACCESSION   DASRPQ010000557 DASRPQ010000000
VERSION     DASRPQ010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2583344"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(206..>1007)
                     /locus_tag="VFD73_06635"
     CDS             complement(206..>1007)
                     /locus_tag="VFD73_06635"
                     /inference="COORDINATES: protein motif:HMM:NF012564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SecY family transport protein"
                     /protein_id="HZI73693.1"
                     /translation="GILARVPVAMKGLWENSTSKLSPEPGKYGIITLLLLLGLFIAVV
                     VGVIAITESQRRIPTQSAKHVRGRRVFGGTRQFLPLKVNQAGVMPIIFASSLLMFPYF
                     ILTSLQRGTSGWMNSQSNWQYAVAKLFDEGASAFQKQGYLYTVFYIVLIYFFCYFWTA
                     ITFNPKDMAENLKDYGSFIPGYRPGRRTADYLEKVMLRITYVGAAFLSLVAVIPSLVA
                     STLNVQFTIASFLGGTGLLIVISVCLDLVQKIDSHLIMRNYSGLMSKR"
BASE COUNT          183 a          305 c          336 g          183 t
ORIGIN      
        1 cgcgagttgt cggatccggt cgtgcgccct ggccacgacc cggcccgcct cgcgcatcag
       61 gttgatctct cggggactct tcagcttgat cacgaccgcc tcgcgggatt gcggaattcg
      121 gaatgcggaa tgcggaatgg aaggggcggg cgggccgtcc gtctctcttc cattccgcat
      181 tccgcattcc gaattccgca atcgttcatc gcttgctcat caggccgctg tagttccgca
      241 tgatcaggtg gctgtcgatc ttctgcacca ggtcgaggca gacgctgatg acgatcagca
      301 ggccggtgcc ccccaggaac gaggcgatgg tgaactgcac gttcagcgtg ctggcgacca
      361 gcgacgggat gacggccacc aggctgagga aggccgcacc tacataggtg atgcggagca
      421 tcaccttctc caggtagtcg gccgtcctgc gcccggggcg gtagcccggg atgaagctgc
      481 cgtagtcctt caggttctcg gccatgtcct tcgggttgaa ggtgatggcc gtccagaagt
      541 agcagaagaa gtagatcagc acgatgtaga acaccgtgta gaggtacccc tgcttctgga
      601 aggcgctcgc cccctcgtcg aagagcttgg ccacggcgta ctgccaattg gactgggagt
      661 tcatccagcc cgacgtcccc ctctggaggc tggtgaggat gaagtagggg aacatcagca
      721 ggctggaggc gaagatgatc ggcatgacgc cggcctgatt gaccttcagg gggaggaact
      781 gccgggtgcc gccgaagacc cggcggccgc ggacgtgctt ggccgactgg gtggggatcc
      841 gccgctggct ctcggtgatc gcgatgaccc ccaccacgac cgcaatgaac aaccccagca
      901 ggagcaggag cgtgatgatg ccgtacttgc cgggctcggg ggagagcttc gaggtcgagt
      961 tctcccagag tcccttcatg gccaccggca cccgcgccag gatgccg
//
LOCUS       DASRPQ010000558         2044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1004372, whole genome shotgun sequence.
ACCESSION   DASRPQ010000558 DASRPQ010000000
VERSION     DASRPQ010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2044
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1004372"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2026)
                     /locus_tag="VFD73_06640"
     CDS             complement(<1..2026)
                     /locus_tag="VFD73_06640"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HZI73694.1"
                     /translation="MSFEPTFQQRRAIESPLGPVLVVAGPGAGKTYCLISRIDHLIRR
                     LGIAPRRILAVTFTNMAAEEIAGRLQECRGLGPEDVTRGTLHAICFKIVREFATQCGL
                     RPGFGIADEDYQLSVLKRLRIPEKIRGRLLARFGLYRLQGRPLGERGSRLLARYQERL
                     RAQNLVDFDDLVVLTEQLLRTDPAAAAELRARWDYLLVDEFQDLSPVQYGILRRLAEG
                     HRNIFGVGDDEQSIFSWAGSDPHIIQRFSDDFGLGQPIVLDRNCRCSVQIFDSAKRLI
                     SCNPRLFEKQIEATRSSTFDVEVQHFDSEEEEADWLIDDLRRDRTEHGFGWGDCALLY
                     RSHRLGRHLEERLVCAGIPCRLAQGHALGDDKIVRWVLSSLQVIQSPDDAVRLGILAS
                     HALPAALRQEVQRSFVKGKDLLANLRIFAAGRSRGDADSRRVWRLIYHLENLRGMARS
                     HQSLAGLVDELLTRPIGIGRNPLEERHQDLSDPAVYPGAAFLAGQINRAIASRQTIWV
                     EPSGGMEIPLLAMLRAAGTPDARRLCVGDQPRDSDLVLRPGDGTAGWALRTFKALQLV
                     QTAGITSDFDDFVAFDIETSDFDIETCEIVEIAAVRVRKRKVVERFHSMVACCRPITR
                     RATDVHGYTDADVCGAPILPEVWSRFCAFVGTDVLIAHNGQEFDVPVLRRV"
BASE COUNT          403 a          669 c          622 g          350 t
ORIGIN      
        1 agacccggcg cagcacgggc acgtcgaatt cctgtccgtt gtgcgcgatc agaacgtcgg
       61 ttccaacaaa ggcgcaaaac cgagaccaca cctccggaag tatcggtgcc ccgcagacgt
      121 ccgcgtcggt atagccgtgc acatctgtcg cacgtctcgt gatcgggcga cagcacgcca
      181 ccatgctgtg aaaccgttcc accacctttc tcttccgcac ccgcaccgcc gcgatctcca
      241 cgatctcgca ggtctcgata tcgaagtcgc tggtctcgat gtcaaacgcg acgaagtcgt
      301 cgaaatcaga ggtgatcccg gcagtctgta ccagctgaag cgccttgaac gtccggagcg
      361 cccatccggc ggtcccgtcg ccgggccgga gtaccaggtc ggagtcacgc ggctgatcgc
      421 cgacacataa cctgcgagcg tcaggggtgc cggcggcccg gagcatggcg agcagtggaa
      481 tctccattcc gccgctgggc tctacccaga tcgtctgccg tgacgcgatc gcccgattga
      541 tttgcccagc cagaaaggcc gcacccggat ataccgccgg atcgctcaag tcctgatggc
      601 gctcctccag cgggtttcgg ccgatcccga tcggacgggt gagcagctcg tcgaccagac
      661 cggccagcga ctggtgcgat cgggccatgc ctctcaggtt ctcgagatgg tagatcagcc
      721 gccacactct gcgggaatct gcgtctcccc gagagcggcc ggcagcaaag atccgcaaat
      781 tggcgagcag gtcctttcct ttgacgaagc ttcgctgtac ctcctgccgg agagcagccg
      841 gcaaggcatg agaagcaagt atgccgagcc gaacagcatc gtcagggctt tgaatgacct
      901 gtagcgagga caacacccag cgcacaatct tgtcgtcgcc cagggcgtga ccctgggcca
      961 gccggcaggg gataccggcg cagaccagac gctcctcgag gtggcgcccc aggcgatgcg
     1021 accggtagag cagggcacag tcgccccagc cgaatccatg ctcggtgcga tccctgcgaa
     1081 gatcgtcgat cagccaatcg gcctcttcct cttcgctgtc gaaatgctgg acttcgacat
     1141 cgaaggtgga gctccgggta gcctcgatct gcttctcaaa cagtcgaggg ttacaggaga
     1201 tcagtcgttt cgccgaatcg aagatctgca ccgagcagcg acagttccgg tccagtacga
     1261 tgggctggcc caggccaaag tcgtcgctga atcgctggat gatgtgaggg tccgagccag
     1321 cccaagagaa gatcgattgt tcgtcgtcgc cgaccccgaa aatgttgcga tgcccttcgg
     1381 caagtcggcg gaggatcccg tactgcaccg ggctcagatc ctggaattca tcaaccagga
     1441 ggtagtccca cctggcacgc agctcagcgg cagccgcggg atcggtccgg agtaactgct
     1501 cggtcagcac cacgagatcg tcgaagtcca ccaggttctg ggcccgaagc cgctcctgat
     1561 atcgggcgag cagccggctt cctcgctctc ccagtggccg gccctgcagc cggtagagac
     1621 cgaaccgggc gagcaatcgg ccgcggatct tctccggaat ccgcagccgc ttgagcacgc
     1681 tcagctggta gtcctcatcc gcgatgccga atcccggacg aagaccgcac tgggtcgcga
     1741 actcccgaac gattttgaaa cagatggcgt gcagcgttcc gcgggtgaca tcttccgggc
     1801 ccagaccgcg gcactcctgc agccgacccg caatctcttc cgccgccatg ttggtgaagg
     1861 tgaccgccag aatccggcgc ggagctatcc cgagtcggcg gatcagatgg tcaattcgag
     1921 agatgaggca gtaagtcttg cccgccccag gaccggctac caccagcacc ggcccgagtg
     1981 gcgattcgat ggcgcgcctc tgctgaaagg tcggctcgaa gctcacgggt gaaccggatc
     2041 gccg
//
LOCUS       DASRPQ010000559         1277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_63692, whole genome shotgun sequence.
ACCESSION   DASRPQ010000559 DASRPQ010000000
VERSION     DASRPQ010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63692"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..256)
                     /locus_tag="VFD73_06645"
     CDS             complement(<1..256)
                     /locus_tag="VFD73_06645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73695.1"
                     /translation="MDETEAYAERYYVTFATSSDSARELMRESFAATDARLPPLERAR
                     LGASGSAFASHQVHGLYDLLFAEAWPVTVNPARFRSDEARM"
     gene            545..772
                     /locus_tag="VFD73_06650"
     CDS             545..772
                     /locus_tag="VFD73_06650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73696.1"
                     /translation="MTRLVGPAQRSAKELALKRSRPSRALPHRPQERRVMYRPFLDAL
                     TPLLVLTLVATAGIGIAIRLCWRRGKSLEDL"
     gene            796..>1277
                     /locus_tag="VFD73_06655"
     CDS             796..>1277
                     /locus_tag="VFD73_06655"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HZI73697.1"
                     /translation="MRLKRRLWLLWIVIIGGCAVGAYRHADFFLIYRQEPTLMAIWAV
                     LFLFAAVQGVLAWFERPYTVKRWERARLGRLRVTVNIPVYNEDPALLDRALYSLARQT
                     RLPDRVSVVDDGSKHDYAEVRDWWQAHWPASSEFHWTRQANGGKKRAQATTFANDPHA
                     "
BASE COUNT          212 a          427 c          416 g          222 t
ORIGIN      
        1 gcatccgcgc ctcatccgag cggaaccgcg cggggttcac cgtcaccggc cacgcctcgg
       61 cgaacagcag gtcgtataac ccgtgcacct ggtggctggc gaaggcggag ccgctggcgc
      121 ccagccgggc ccgctccaga ggcggcagcc tggcgtcggt cgcggcgaag ctctcccgca
      181 tcagctcacg ggcggagtcg ctggaggtgg cgaaggtgac gtagtaccgc tcggcgtaag
      241 cctccgtttc gtccacactc gctcatgccg tgtgcaagca tgtcgtgtca cgcaagggaa
      301 gggatcacct cacgtctgcg acgggcagtg gctgtgcagg gttgagacgg caggcatcaa
      361 cccggtctcc acatggttgg gcctcacctg ggtggcggga cgcctagctc ggttcgcggt
      421 gtcaggtctg tcctcgcgtg ccaggtactc cagccgggcc cccgagtgga cgcaccaaag
      481 catggcctag cgcgatgagc ctgatgggag cctctgctcg tgccgacgac tccccaccaa
      541 agcaatgacc aggctggtgg gaccagcaca gcgcagcgcc aaggagctgg cgttgaagcg
      601 ctcgcgtcca tcgcgcgcac tgccccatcg tccccaggag aggagggtca tgtaccgccc
      661 attcctcgac gcactcacgc cgctgctcgt gctcacgctg gtcgccacgg ccggaatcgg
      721 catcgcaatc cggctgtgct ggcggcgagg gaagagccta gaggatctct gaaccgaagc
      781 tacgagattc ccacggtgcg gctcaagcgc cgcctgtggc tgctgtggat cgtcattatt
      841 ggcggctgcg cggttggtgc ttaccggcac gccgacttct tcctcatcta ccgccaagag
      901 cccacgttga tggcgatttg ggcagttctg ttcctcttcg ctgctgtgca gggcgttctc
      961 gcatggttcg agcggcctta taccgtcaaa cgctgggaac gcgctcgcct gggccggctg
     1021 cgggtcactg tcaacatccc ggtgtacaac gaagaccccg ctttgcttga ccgtgctctt
     1081 tactccctgg cccgtcagac caggttgcct gaccgcgtca gcgtggtcga cgacggctcc
     1141 aagcacgact acgccgaagt ccgggactgg tggcaggcgc actggcccgc tagctccgag
     1201 ttccactgga cgcggcaggc caacggcggg aagaaacgcg cccaggcgac gacgttcgcc
     1261 aatgacccgc atgccga
//
LOCUS       DASRPQ010000560         1166 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_692418, whole genome shotgun sequence.
ACCESSION   DASRPQ010000560 DASRPQ010000000
VERSION     DASRPQ010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1166
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_692418"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(103..243)
                     /locus_tag="VFD73_06660"
     CDS             complement(103..243)
                     /locus_tag="VFD73_06660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73698.1"
                     /translation="MPLQEREYNTTSGISTIVCWASVDQDPAARRSSQEGSISLPDVK
                     KM"
     gene            complement(316..777)
                     /locus_tag="VFD73_06665"
     CDS             complement(316..777)
                     /locus_tag="VFD73_06665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73699.1"
                     /translation="MRVESSQSFARRVAVVVVSDRYHGPLGSQGVEPFISGTAAAAVM
                     THLQEVDLTGQTSHRLFRGKPGIARKQYLEVTVLDEEHQRVLIQVFTPACPIPIGMKD
                     AEVHTIQDKVLSPMSRVPGNVFGGEILEKAVIERIRHLLSRLDDQPGRQLL"
     gene            914..>1166
                     /locus_tag="VFD73_06670"
     CDS             914..>1166
                     /locus_tag="VFD73_06670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HZI73700.1"
                     /translation="MQTSVTTIERFILDQEDRYPEATGELSNLLYDIALASKIIAAAI
                     RRAGLVNILGAAGQQNVQGEEQQKLDVFANETIKNCLKHT"
BASE COUNT          222 a          331 c          385 g          228 t
ORIGIN      
        1 tggcgcgagg cgctgcggag gtggagctgg gcaggcgccg cgctcctctg gatcagtctg
       61 ttcagcgggt gggttccgcc tcacggggct tcggggttga cgttacattt tcttgacgtc
      121 gggcagggag atggagccct cctgcgaact cctgcgggcc gctggatcct gatcgacgct
      181 ggcccagcag acgatggtgg agatgccgga cgtcgtgttg tactcccgtt cttgaagcgg
      241 cacggtgtcc ggcgattggc tttggccatc gtgtcacacg cgcacagaga tcatctgggc
      301 ggggtgccca gtgtgttaca gcagttgcct gccgggctgg tcatcgagcc gggagagcag
      361 gtgccggatt cgctctatta ccgctttctc caggatctct ccgccgaaca cattccctgg
      421 cacccggctc atcggggaga gcactttgtc ctggatagtg tggacttcag catccttcat
      481 ccctataggg attgggcagg ctggggtgaa gacctgaatg aggactcgct ggtgctcctc
      541 gtcgagtacc gtgacttcga ggtattgttt gcgggcgatg ccgggtttcc cgcggaacag
      601 tcgatgcgag gtctgacccg tgaggtcgac ctcctgaagg tgggtcatca cggcagccgc
      661 ggcagtaccg gagatgaatg gctcgactcc ctgcgaccca agggggccgt gatatcggtc
      721 ggacacaaca actacggcca cccggcgggc gaaactctgg gacgactcca cgcgcatggc
      781 gtggcggtgt ggcggactga tcaggatggg accgtgacgg tcacgaccga tggcagtcgg
      841 atgacgctcc agtcccgacg cggcaccatg acatacgacg tccgagatac cgcgagaacg
      901 gagaaggcaa atcgtgcaaa cctcagtgac caccatcgag cggttcatcc tggatcagga
      961 agatcgctat cccgaagcca cgggtgagct gtcgaacctg ctctatgaca ttgcgctcgc
     1021 cagtaaaatc atcgccgcgg caattcgtcg cgccgggctg gtcaatattc tgggagctgc
     1081 gggtcagcag aatgtgcagg gcgaggaaca gcagaagctg gacgtcttcg ccaatgaaac
     1141 catcaagaac tgtctcaagc acaccg
//
LOCUS       DASRPQ010000561         1147 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2257984, whole genome shotgun sequence.
ACCESSION   DASRPQ010000561 DASRPQ010000000
VERSION     DASRPQ010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2257984"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..276)
                     /locus_tag="VFD73_06675"
     CDS             complement(<1..276)
                     /locus_tag="VFD73_06675"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI73701.1"
                     /translation="MTPVRVLVVDDSALMRKLIPQILQTDSSIQVVGTAMDGNFGLRK
                     IDELKPQVITLDLEMPGMGGIDMLKEIMRRHRLPVIVVSSHSTQGASI"
     gene            complement(273..>1147)
                     /locus_tag="VFD73_06680"
     CDS             complement(273..>1147)
                     /locus_tag="VFD73_06680"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HZI73702.1"
                     /translation="EERVRNGKPARGTIHLTSYHHGNQVIVEVSDDGVGIDAQKVKAK
                     ALEKGLVTREEADGLGEAETLALVFRPGFSTANEITEISGRGVGLDVVQTVLHRLKGS
                     VEIETRVGQSTTFRLKLPLTLAIIKALLFRVEQRLYAVALNAVAEIARARESDVHQVH
                     NHEVLQLRDRVLPLVRLGRAPGKGAQGGSEKIFVLVISMGERKLGMIVDSLEGEEELV
                     IKALDDQTVATDLISGASILGDGRVVLIVNLPAVVDRHGKIRPEEGEGIASGLLLSHA
                     DRKTLRESAAEVRP"
BASE COUNT          202 a          388 c          328 g          229 t
ORIGIN      
        1 gatcgatgct ccctgcgtgc tgtgggaact caccacgatc accggcaggc gatggcggcg
       61 catgatctct ttgagcatgt cgatgccgcc catgcccggc atctccagat cgagcgtaat
      121 gacctggggc ttcagctcat caattttcct gaggccgaag ttgccgtcca tggccgtccc
      181 gactacctgg atcgaactgt ccgtctgcaa aatctgtgga attaacttcc gcatcagcgc
      241 ggaatcgtcc accaccagca cgcgcaccgg cgtcatggac gcacctccgc cgcgctctcg
      301 cgcagggtct tgcggtcggc gtgggagagc aggagcccgg aggcgatgcc ctcgccttct
      361 tccggacgaa tcttgccgtg ccgatccacc accgcgggca gattgacgat gagcaccacg
      421 cggccatcgc ccaggatgga tgctccgctg atcaggtcgg tggccacggt ctggtcgtcg
      481 agcgccttga tgacaagctc ttcctcaccc tccaggctgt ccacgatcat ccccagcttc
      541 cgctcgccca tggaaatcac cagcacaaaa atcttttccg agcccccctg ggctcccttt
      601 cccggcgcgc gccccagacg gaccaagggc aggacgcgat cgcgcagctg caagacttca
      661 tggttatgca cctggtgaac gtcggattcc cgggcccggg caatttccgc gactgcgttc
      721 agggccacgg cgtacagcct ctgctccacc cggaatagca gggccttgat gatggccaga
      781 gtgagcggca gcttgaggcg aaaggtggtg ctctgaccca ctcgggtctc aatctcaacc
      841 gagcctttca accggtgcaa taccgtctgc accacgtcca ggccgacgcc gcggccggag
      901 atctcggtga tttcgttggc ggtgctgaac cccggtcgga agaccagcgc gagagtctcg
      961 gcctcgccca aaccgtccgc ctcttcccgg gtaaccagac ctttctccag agccttggct
     1021 ttgaccttct gagcgtcaat gccgacgccg tcgtcactga cttccacgat aacctgattg
     1081 ccgtggtggt acgaagtgag atggatggtt ccgcgtgccg gcttcccgtt tcggactctc
     1141 tcttcgg
//
LOCUS       DASRPQ010000562         1063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4452889, whole genome shotgun sequence.
ACCESSION   DASRPQ010000562 DASRPQ010000000
VERSION     DASRPQ010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4452889"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..524)
                     /locus_tag="VFD73_06685"
     CDS             complement(<1..524)
                     /locus_tag="VFD73_06685"
                     /inference="COORDINATES: protein motif:HMM:NF025380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HZI73703.1"
                     /translation="MAAIVAVLVLILVLSAVHLLPQLRNPFAETTTVRSQPVILKSIT
                     NLSRYEAASGSFQVVVDLTKRSSLIPSFLEGSETLFIGQGTDIAYVDFATLKSGAIAV
                     NANRTAVTVTLPKPQLEPAVLNVNQSYVYAEQQGLFNRIGNFFSGNPNSQQQVYQIAQ
                     QKIGTAARQSPLLA"
     gene            749..889
                     /locus_tag="VFD73_06690"
     CDS             749..889
                     /locus_tag="VFD73_06690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73704.1"
                     /translation="MLVLLLIVVLIILSLMFGGFQKGTKSGGLGPMRPLCTTCTSAPM
                     TG"
BASE COUNT          177 a          326 c          355 g          205 t
ORIGIN      
        1 tcggccagca gcgggctctg ccgcgccgcg gtcccgatct tctgctgggc gatctggtac
       61 acctgctgct ggctgttcgg gttgccggag aagaagttgc cgatgcggtt gaacagcccc
      121 tgctgctcgg cgtacacgta cgactggttg acgttgagta cggccggctc gagttgcggc
      181 ttcggcagcg tcacggtgac cgcggtgcgg ttcgcgttca ccgcgatggc cccgctcttc
      241 agcgtggcga agtcgacgta cgcgatatcg gtgccctgcc cgatgaacag cgtctcgctg
      301 ccctcgagga acgaggggat caggctgctc cgtttggtca ggtcgaccac gacctggaac
      361 gaaccgctgg ccgcctcgta gcggctgagg ttggttatcg acttcaagat gaccggctgg
      421 ctccggacgg tggtggtctc cgcgaacgga ttccgcagct ggggcagcag gtggaccgcg
      481 gaaaggacca ggataagcac gagcacggcc acgatcgccg ccacgatccc gcccacgctc
      541 ggcatacgcg gccgggtttt cctcgggttt tgcgccgtcg gctggctaag gagcttcacg
      601 agtcactgag ctacccggac cgggtcagat aattcggcgc ggccggcata ttgcgctgtg
      661 cttgggcata cagatgcgta tgtacaggtc taggggccgg gggcgcccgc ggcgccgctg
      721 gccgcaatcg cggacgggcg gatgcctgat gctggtactg ctgctgatcg tggtgttgat
      781 catcctgtcg ctgatgttcg gcggtttcca gaaaggcacc aagtcgggcg ggcttggccc
      841 gatgagacct ttgtgcacaa cctgcacttc cgcaccaatg actggttgat ttactcgatg
      901 cggatcccgc gttcatgtac gtagaacgca atgccgcttt ggctaatgga ccacggccgg
      961 acgacgcgtt cctgaaaacc ggactcaggc cccaccggca cctacagcct cacgatccgg
     1021 gtgcgccggg cccgctggaa cgcaatgaaa cccggaatcc agt
//
LOCUS       DASRPQ010000563         1090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4138284, whole genome shotgun sequence.
ACCESSION   DASRPQ010000563 DASRPQ010000000
VERSION     DASRPQ010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4138284"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            156..>1090
                     /locus_tag="VFD73_06695"
     CDS             156..>1090
                     /locus_tag="VFD73_06695"
                     /inference="COORDINATES: protein motif:HMM:NF042648.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,N-dimethylformamidase beta subunit family
                     domain-containing protein"
                     /protein_id="HZI73705.1"
                     /translation="MLARSFNGKLGSLALRDDRGEIVAAWHFGLEPHTDRIIDTGPLG
                     LHGATVNMPMRAVTGAGWTGHVLNCAEAPDEYDAIYFHDDDLEDAGWQPSFDWRIPDN
                     MPSGIYAAALETSDAKDWVPFFVCPPRGQARNAVVFLAPVLSYLAYVNEHYMADPVRQ
                     TEAYSIERALARATPYEREIVHAVLENRLHSLYDSHSDGSGVCYSSARRPLLTMRPGY
                     NKASLWFDAPHQLNEDLCLTDWMEQQRQGYDVLTDQILHHDGVAALAPYRVLMTGSHP
                     EYWSEPMLDAVEAFLANGGRLMYLGGNELYWVTTI"
BASE COUNT          198 a          347 c          343 g          202 t
ORIGIN      
        1 gaaaatccga atgggtccat ataaccgtaa aggtgaattc cgatggcgag gtgacgcttg
       61 cagccgcgcc gggcgggttg agcccaccaa gcgcgatgtg gcgggtctct gcacccgctg
      121 acgttcgtcc gagcctcgcg accgccggac cgctcgtgct cgcacgatcg ttcaacggga
      181 agctgggtag cttggcgctt cgcgacgacc gaggcgagat cgtggctgcc tggcatttcg
      241 gtctggaacc gcataccgac cggatcatcg acaccggccc gctcgggctg catggcgcaa
      301 ccgtgaacat gccaatgagg gctgtcaccg gtgccggctg gacagggcac gtgctgaact
      361 gtgccgaagc tcccgacgag tacgacgcga tctactttca cgacgacgat ctggaagacg
      421 ctggctggca gcccagcttc gactggcgga tccccgacaa catgccgagc ggcatctacg
      481 ccgccgcctt ggagacttcc gacgcaaagg actgggttcc cttcttcgtc tgtccgccgc
      541 gcggccaggc caggaatgct gtggtattcc tcgcgccggt gctcagctac ctggcctatg
      601 tcaacgagca ttacatggca gaccctgtcc gccagaccga ggcctattcg atcgagcgtg
      661 ccctcgcgcg agcgaccccg tatgagcggg agatcgtgca cgcggtgctc gagaaccgcc
      721 tgcacagcct ctatgacagc cattcggacg gtagcggcgt ctgctattcc tcggcccggc
      781 gcccgctgct gaccatgcgg ccggggtaca acaaggcttc gctgtggttc gacgctcccc
      841 atcagctcaa cgaagatctg tgcctcactg attggatgga gcagcagcgc cagggttacg
      901 atgtactgac cgaccagatc ctgcaccacg acggtgtggc ggcgcttgcg ccctatcgtg
      961 tcctgatgac cggcagtcat ccggaatatt ggtcggagcc gatgctggac gcggtggagg
     1021 cgttcctggc caacggtggc cggctcatgt atctcggcgg caacgaatta tattgggtca
     1081 ccaccatcga
//
LOCUS       DASRPQ010000564         1029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1632353, whole genome shotgun sequence.
ACCESSION   DASRPQ010000564 DASRPQ010000000
VERSION     DASRPQ010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1632353"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          206 a          311 c          324 g          188 t
ORIGIN      
        1 acgtaaccca cgggtcagct ggggcgatcg gcctgccagg ccaatggtct taccgcgctc
       61 aacggccagc aggacaaggg catggcagat gcaggcgttc agactctatc gggcgctgca
      121 gctcagccgc ggatgccagc aaccggcccc ggggacgtgt gagcacacgc ggaagcactc
      181 gaccgagatc ccgctccagc tgtcgaaccc gtctcacgtc agatcgaacc gagtctcggg
      241 ccgaccggaa cggacattga aaatcgcgga gcggagattc gcgggctcgg gatagttggt
      301 ggcctgctgc atgaacacgc ccgatatgcc caagggatac gccatacacg tacgcgtcct
      361 tggcgatgtc gcacgcgtcc tgttcagaca ggttctgagc cgagacgcag tccgcccatg
      421 aaacggtcag acagcatgcg aggatccgta tcgcttcgcg tgctcttgcc atggttagcc
      481 ctccggctgc aggcgagccg gccggcgcag gctgccggtc agttgctctt ctcgacgatc
      541 tggtcgctcg agaaactcga aggccgctgg ctcggcggat agtccttgaa cgtggccagg
      601 aactggccca cgacggttgt acgagaagag gaaaaaggct gcatttcacc gtcgcccagt
      661 ccgcagcatg gaccggttca gtcaaccatc ctgtgacgat caacaccacg gctcaccacg
      721 gccgcgggag acactgagac ggaagcggac tggcgtcccc ttcttggggg atcgtcgaca
      781 accgtcctgg cgctcggccc gacagggcaa agaccccagg gctcctgtgg tggagatgtc
      841 gcgcgaatga tggaacagtc tcacaacttg ggtcgaggtt gatttccact gcgggtcata
      901 cgcggacttg ccgcatgtca attggactcg tccgctcctg ccttggaagc ggacattccg
      961 ctggatgtca ctaaacgtca gctaagtgcc aggagcagtc tttattgcat gttggtgctg
     1021 gtgcattgg
//
LOCUS       DASRPQ010000565         1463 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1953426, whole genome shotgun sequence.
ACCESSION   DASRPQ010000565 DASRPQ010000000
VERSION     DASRPQ010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1463
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1953426"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            392..1075
                     /locus_tag="VFD73_06700"
     CDS             392..1075
                     /locus_tag="VFD73_06700"
                     /inference="COORDINATES: protein motif:HMM:NF025605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HZI73706.1"
                     /translation="MAISGSVELQREPKWHRRPDIRRGEILDSAVLAFGQNGYKRTTL
                     ADVAGRAGVSPGTVCHYFGSKATLFEEVITERLMPSIEIEEASLAQHRGPVWDLLDQL
                     LRRFWERAWQPGTLDLLQVVKVESAEFPESGRLLCRQLGDRWRKLYGTILLAGIKRGE
                     FRPMDVKVTARTISYSLLGVAEKVSTFAPYDAGMPEREVMWQAVRDMVSRFVLAKPPR
                     AANKEKYSE"
     gene            1068..>1463
                     /locus_tag="VFD73_06705"
     CDS             1068..>1463
                     /locus_tag="VFD73_06705"
                     /inference="COORDINATES: protein motif:HMM:NF024923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HZI73707.1"
                     /translation="MSETTGTRVRAIASLSAVAALSLAAGCKKNAPPPAPPPPEVAVV
                     QVEPERLPTSFEFTGEVQPYRRVEVRSRIDGIIEARPFTEGSIVKPGQVLYRIERVRP
                     EAAYQAALARAENAKRTLQRLQPLLKENAV"
BASE COUNT          262 a          464 c          484 g          253 t
ORIGIN      
        1 tgcgaggagc accgcgacct ggccaccgcc agtctgatcg aggtctggat cgacgagacc
       61 gaacggcgca cctggttcct ctacgagtca gcccggcggg gagacagctc gggtcactaa
      121 tcagagcggt gagacaattc ggcctggcac gaccctcggc gcctgaggag tgcggcgccc
      181 tgggccggcc aggcctgctt cattggaatc agcactcgac gccgtccgca gagcctccat
      241 ccgagacccg cgctggattt cgcggcttcc cacccaaccg ttacagacgt aggtcttgcc
      301 agcggtgctg tttccctatt atttggccat tcaatagtgt ggcgggaccg ggctgccccg
      361 tggcggcccg atttcatttg gaggactagc ggtggcaatc agcggttcag tcgagctcca
      421 gcgcgagccc aagtggcacc ggaggccgga catccgccgg ggggagatac tcgatagcgc
      481 cgttctggcc tttgggcaaa acggctacaa acgcaccacc ctggccgacg tcgccggccg
      541 ggccggcgtc tcgccgggaa ccgtctgcca ctacttcggc tccaaggcca cgcttttcga
      601 ggaagtgatc actgagcgcc tcatgccctc gatcgaaatt gaagaggcga gcctggcaca
      661 gcatcgtgga ccggtgtggg atcttctcga ccagttgctg cggcgcttct gggagcgagc
      721 ctggcagccg ggaaccctcg acttgttaca ggtggttaag gtcgaaagcg ccgagtttcc
      781 tgagtcgggc cgactgctct gccggcaatt gggcgaccgc tggcggaagt tatacggaac
      841 catcctgctt gccggcatca agcgtggcga gttcagaccg atggacgtca aagtcacggc
      901 acgaaccatc agctattcgt tgctgggtgt ggcggagaag gtttccacct tcgctcccta
      961 cgacgccggt atgcccgagc gggaagtgat gtggcaggcg gtacgggaca tggtaagccg
     1021 cttcgtgctg gcgaagccgc cgagagcggc caataaggag aagtacagtg agtgagacca
     1081 caggtacacg cgtccgcgcg atcgcgtcgc tgagcgccgt ggccgcgctg tcgctggcag
     1141 ccggctgcaa aaagaacgcg ccaccgccgg ctccgccgcc gcccgaggtc gcggtcgttc
     1201 aggtcgagcc ggagcggctt ccgacctcct tcgagttcac cggcgaggtc cagccgtacc
     1261 ggcgggtcga ggtccgctcc cgcatcgacg gaatcattga agcgcggccc tttaccgagg
     1321 gcagcattgt caagccgggc caggtgctct atcggatcga gcgggttcgc cccgaggctg
     1381 cctatcaggc tgcgctggcc cgggcggaaa atgccaagcg taccctccag cggctgcagc
     1441 ccctcctgaa ggagaacgcg gtc
//
LOCUS       DASRPQ010000566         3383 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_64685, whole genome shotgun sequence.
ACCESSION   DASRPQ010000566 DASRPQ010000000
VERSION     DASRPQ010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3383
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64685"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..909)
                     /locus_tag="VFD73_06710"
     CDS             complement(<1..909)
                     /locus_tag="VFD73_06710"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HZI73708.1"
                     /translation="MTDLLTPPVRSTHTPLATEQEAREVAEAAREKEWEAPSFVRELF
                     EGSFRLDLVHPYPQPDPADLERAKPFMERLERFMRERVDSDKIDRDGKVPADIVKGLG
                     EIGAFGIKIPVEYGGLGLSQYSYTHAIGLVTSQDGNLTALLSAAQSIGVPTPLKLFGT
                     PAQKKKYLPRLAKGAVSAFALTENHVGSDPAGLTTTATLSEDGKSYILNGEKLWCTNG
                     TIAELMVVMARTGPKKITAFIVETNWPGVEVVQRLHFMGLKALENGIIRFSNVRVPEE
                     NVLWGEGKGLKLALITLNTGRLTLPAS"
     gene            complement(902..1567)
                     /locus_tag="VFD73_06715"
     CDS             complement(902..1567)
                     /locus_tag="VFD73_06715"
                     /inference="COORDINATES: protein motif:HMM:NF037007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HZI73709.1"
                     /translation="MPLTSERIRNPERSRAAILDAAERLFAEQGFDATSLTQVGAAAG
                     VSRGTPGYFFRSKAELYQAVLDRSFAEVREAVRAGRARALASNESLETILAGAVSDYF
                     DFLAARPNFVRLIEREALNGGRLPDGDSHLSAGQEALAAISAELGLDDSASGEAAQLL
                     LSIISLCWFSLIHARTVAPAVGVSLHDAAAIERRKRHVISLVLHGIRGLVPTTSTELS
                     SHD"
     gene            complement(1665..>3383)
                     /locus_tag="VFD73_06720"
     CDS             complement(1665..>3383)
                     /locus_tag="VFD73_06720"
                     /inference="COORDINATES: protein motif:HMM:NF013784.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase-related protein"
                     /protein_id="HZI73710.1"
                     /translation="AKPGEGGQLPAHKVTDLIARLRHAVPGIQLISPPPHHDIYSIED
                     LAQLIHDLRTVNPRARVGVKLVSESGVGTVAAGVAKAYADYVLIAGHNGGTGASPLSS
                     IKHVGSPWELGLAEAQRTLVRNGLRHRIEVRTDGGLRTGRDVVIAAMLGAESYGFGTA
                     PLVALGCAMARQCHSNTCPTGVATQREDLRAKFRGTPEQVIAYFTRVAEEVRQILASL
                     GFRALDEIIGRNDLLTRIDRPEVPRSGLLDLRMLLAGNEDQAVGRTASRPGATLPEHS
                     LRRTVERNDRPGVISLDEEILEDVEPYLDSGLPFSGNYQVRNHHLAVGARVAGAIVER
                     RGDAGLTPNSVQLRFIGSAGQSFGAFACRGMHLELEGEANDYVGKGLSGGEIIIRPFR
                     RAGYAHASHQHIIMGNTVLYGATGGKLFAAGQAGDRFAVRNSGAVAVIEGAGNHCCEY
                     MTGGIVVVLGRAGRNFAAGMSNGAAYVIDESGTFSGRLNHDMVELQEMDIVDIELLRK
                     LIHAHEEKTVSARARTILVRWNDYLPLFRKVVAKGAGALAEATIRKQLESPQTQAEPA
                     LIRQTA"
BASE COUNT          604 a         1094 c         1045 g          640 t
ORIGIN      
        1 agatgccggc agcgtaagcc gtccggtatt caaggtgatc aacgctagct tcagtccctt
       61 gccttccccc cagagcacgt tctcctctgg cacccgaacg ttgctgaagc ggatgatgcc
      121 gttctccagg gccttcagtc ccatgaagtg aagccgctgg accacctcga caccgggcca
      181 gttcgtctcc acgatgaacg cggtgatctt cttcgggccg gtccgcgcca ttaccaccat
      241 cagctcggca atggtgccgt tggtgcacca gagtttttcc ccgttcagga tgtagctctt
      301 gccatcctcg gacagggtgg ctgtcgtggt gaggcctgcc ggatcggagc cgacgtgatt
      361 ctcggtcagg gcaaaggcgg agacggcccc cttggccagc cgaggcagat acttcttctt
      421 ctgggccggc gtaccgaaca gcttgagagg cgtgggcacg ccaatcgact gcgccgccga
      481 gaggagcgcg gtgagattac catcctggct ggtgaccagt ccgatggcat gggtgtagct
      541 gtactggctc aaaccgagcc caccatactc aaccgggatt ttgatcccga acgcaccgat
      601 ttcgccgagt cctttgacga tgtcggccgg aacctttccg tcccgatcga tcttgtcgct
      661 gtccacccgc tcgcgcatga accgctcgag tcgctccatg aacggcttgg cgcgctccag
      721 atctgcgggg tcgggttgcg ggtagggatg gaccaggtcc agccggaacg aaccctcgaa
      781 cagctcgcgc acgaagctgg gcgcttccca ctccttttcc cgcgctgcct cggcaacttc
      841 gcgggcctcc tgctcggtgg cgagcggagt atgcgtggac cggaccgggg gagtcagaag
      901 atcagtcatg gctcgagagc tcggttgagg tggtgggaac gagtccgcgg attccgtgga
      961 gtaccagaga aatcacgtga cgcttgcgcc gctcgatcgc tgctgcatcg tgcaggctca
     1021 cgccaacagc aggcgcaacg gtgcgggcat gaatcaggga aaaccagcaa agcgaaatga
     1081 tgctgagcag cagctgcgcc gcctcacccg atgccgaatc atcgagcccc agctcggcgc
     1141 tgatcgcggc cagcgcctcc tgtcccgcgg agagatgact atctccatcg ggcagcctgc
     1201 cgccgttcag cgcctcgcgc tcgatcagcc gaacgaagtt ggggcgggcc gcgagaaagt
     1261 cgaagtagtc ggacacggca ccggcgagaa tcgtctccag actctcattg ctcgccagcg
     1321 cccgggcgcg tcccgctcga accgcttccc gaacctcggc gaacgagcgg tcgaggaccg
     1381 cctggtaaag ctccgctttg gatcgaaaga agtagccagg ggtaccgcgg gagacgccgg
     1441 ccgccgcgcc tacctgagtg agactggtgg cgtcgaatcc ctgctctgca aacagacgct
     1501 cggcggcgtc cagaatcgcc gctcggctcc gctcggggtt tcggatgcgc tcactggtca
     1561 gtggcaagat gcgctcgtgc aagtgtttgc agcttgcttg ctgctcagca agttacctag
     1621 ctggcgaagg gcttgtcaac gggctggcct aaaggcgaac cgcgttaggc ggtctgccga
     1681 atcagggccg gctccgcctg agtctgggga gattcgagtt gcttccttat agtggcttct
     1741 gccagcgctc cggcaccctt ggccacgact ttccggaaga gcggcagata gtcattccag
     1801 cgcaccagga tggttcgggc ccgggcactt accgtcttct cctcgtgagc gtggatcagc
     1861 tttctgagga gctcgatgtc gacgatatcc atctcctgca gctccaccat atcatgattc
     1921 agtcggccgg agaacgtgcc cgattcatcg atcacgtagg cggcgccgtt ggacatgccg
     1981 gcggcaaagt tccgtcccgc tcggccgagc acaacgacaa ttccgccggt catgtattcg
     2041 cagcagtggt ttcccgcccc ctcgatgaca gcaaccgccc cggaatttct gaccgcaaag
     2101 cgatcgcctg cttgaccagc ggcaaacagc ttcccaccgg tggcaccata caggacggtg
     2161 ttgcccatga tgatgtgctg gtgcgacgcg tgggcgtacc cggcgcggcg gaatggccgg
     2221 atgatgattt cgcctccact tagtcccttg cccacatagt cgttggcttc tccttccagc
     2281 tccagatgca tgcctcggca ggcaaaagcg ccgaagcttt ggcccgcgct gccgatgaag
     2341 cggagttgaa cggagtttgg agtaaggccg gcatctcccc gtcgctccac gatcgctccg
     2401 gcaacccggg ctccgacggc gaggtgatga ttgcgcacct ggtaatttcc ggagaaggga
     2461 agaccggagt cgaggtaggg ctcgacgtct tccagaatct cctcatccag tgagatcacc
     2521 ccgggccgat cgtttcgctc gaccgtacgt cgaagtgaat gctctgggag cgtagccccc
     2581 ggccgactgg cggtgcgccc gaccgcctga tcttcgttcc ccgccagcaa catcctcaaa
     2641 tccaacagcc ccgaccgggg cacctccggc cgatcgattc gggtgagcag gtcgttgcga
     2701 ccgatgattt cgtccaacgc ccggaacccg agcgacgcga ggatctggcg aacttcctcg
     2761 gccacacggg tgaagtacgc gatcacctgc tccggtgttc cccggaactt ggctctgaga
     2821 tcttctcgct gggtcgcgac cccggtggga caggtgttgc tgtggcattg ccgcgccatg
     2881 gcacagccga gcgccaccag cggagcggtc ccgaaaccat agctctcggc accgagcatg
     2941 gcagcgatca ccacatcgcg cccggtcctc aggcccccgt cggtccgaac ttcgatccga
     3001 tggcgtaatc cattccgcac cagggtacgc tgtgcttctg ccagacccag ctcccagggc
     3061 gatccgacgt gcttgatcga ggaaagggga gacgcaccag tcccgccgtt gtgccctgcg
     3121 atcagcacat agtcggcgta ggccttggcg accccggccg ctacggtgcc cactccgctc
     3181 tcggaaacca gcttcacgcc aactcgcgcc cgcgggttca ccgttctgag gtcatggatc
     3241 aactgcgcca gatcctcgat ggagtagatg tcgtgatgtg gtggcggaga tatgagctgg
     3301 atgccgggaa cggcatgtct gagccgggcg atcaggtcgg tgaccttgtg cgccggcagc
     3361 tgcccgccct ctcccggctt ggc
//
LOCUS       DASRPQ010000567         2362 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3207479, whole genome shotgun sequence.
ACCESSION   DASRPQ010000567 DASRPQ010000000
VERSION     DASRPQ010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2362
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3207479"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(320..>2362)
                     /locus_tag="VFD73_06725"
     CDS             complement(320..>2362)
                     /locus_tag="VFD73_06725"
                     /inference="COORDINATES: protein motif:HMM:NF013124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HZI73711.1"
                     /translation="QRIRTMIFGLLGPLLCPSSVPGNEACRLSAAKHRSLLAILLISA
                     NRIVRVERIIDELWSDHPPESAENLIRQYVSQLRRRLRPGLCKAGRDGHLIETAPAGY
                     VLYLRPGDLDLDVFERQVSEAHAAVGAGNPSAAQALIDDAIGLWRGPFLADVPSSPLI
                     AQEASRLEECKAGALELRLQTRLARGQFTELLSEVVGLVATYPRWENLRGLQMRALYG
                     VGRRADALAAYHGFRQELVDELGIDPGPRLNAIHSAILEDNVEALQLPPATAKLSDPV
                     ASATVRVVPAQLPNCPLDLIVDETRSSLKLANLATDEASAARPLIVVSGMTGTGKTAL
                     AVHHSRQCLREYPDGQLFVPLNGSSGDPTDPAEALRRILWAFTSSAGQIPDRIDAAAD
                     LYRSFLAKRRALVILDDAHDEAQVRPLLPGGTQNRVIVTSLRPLVGLEGARHIRIGTL
                     STEHGLLLLGQIADPERIRREPAAAAEIVEHCGRLPLAIRIAGGILIAHPHMTVAQLA
                     GRLATGNILDQLSVSYLDLRDRLTANWQSLSRDLQGVLRQTAAMPASGFSSAMVACSL
                     GEKSWPPASPRPIEQVDEDLERLAEVDLLEVITTGKGQTTEYRLNSLMRAYVLETQPS
                     PASAPRRVSGPQRAPSPPRAGRCSRAARYRYPTGPAACRSYLPSIARPTQQQRPDS"
BASE COUNT          393 a          711 c          842 g          416 t
ORIGIN      
        1 agaagcacga ctcggtgcgg gtccggatcg agcaccctgg tgacgatcgt ttcgagtggt
       61 gggtacaacg ccgggacgga tcgcggcgtg gcatctgcag caggtgagcg aggacgcgcg
      121 gatcaagacc cggcgggcgc acgcgcagtc tcccccggcg ggaatgtctc ccacgtatgg
      181 cccaccgacg acagccgacg gccccggggt acatgcgcgg tccgattgtg gccgcgcccc
      241 gtgagccgga tggctggtac ctgttgcatc gagtgccgcg cagagatcga agaggcaatc
      301 ctgtcggttg cgtacaacct caggaatccg gccgctgttg ctgagtcggg cgcgctatgg
      361 atgggaggta actgcggcag gcggcgggcc cagtagggta ccgatagcgt gccgctctac
      421 tgcatcggcc ggcgcgcggt ggtgacggtg ctcgctgcgg cccggacact cggcggggag
      481 ccgatgcagg tgaaggctgg gtttcgagga cataggcgcg catgaggcta ttgagccgat
      541 attcggtggt ctggccctta ccggtggtta tgacctccag aaggtcgact tcggcaagcc
      601 gttccaggtc ctcgtcgacc tgttcgatcg gacgcggtga ggccgggggc caggacttct
      661 cgcctaggct gcaggcgacc atcgctgagc tgaagccgct ggctggcatc gctgcggtct
      721 ggcggaggac gccttgcagg tcgcgggaga gggactgcca attggccgtg agcctgtcgc
      781 gcaggtcgag gtagctgacg ctaagctggt ccagaatgtt tccggtcgcc aggcgcccgg
      841 ctagctgcgc tacggtcatg tgcggatggg cgatcaggat gccgccggca atccggatgg
      901 ccaacggcag tctgccgcag tgctccacga tctcggcggc ggcagcgggc tcccgtcgta
      961 tccgttctgg gtctgcgatc tggcctagca gcaggaggcc gtgttcggtg gagagtgtac
     1021 cgatacggat gtgcctcgcc ccctccaagc cgaccagggg ccggaggctg gtgacgataa
     1081 cccggttctg cgtgccaccg ggtagcagcg gccggacctg cgcttcatcg tgagcgtcat
     1141 cgaggatgac gagggcacgt ctcttggcca ggaagctacg gtaaaggtcg gcggccgcat
     1201 cgatcctgtc cgggatctgc cccgccgagc tggtgaatgc ccacaggatg cggcgcaggg
     1261 cctcagccgg atcagtaggg tcgccgctgc tcccgttcag cggcacgaat agctggccgt
     1321 cgggatactc ccggaggcat tggcggctgt gatgaactgc gagcgcggtt tttcccgtac
     1381 ctgtcatgcc ggacactacg atcagtggcc gggcagctga tgcttcgtca gtggccaggt
     1441 tggctagctt caggctgctc cgcgtctcat cgacgatcag gtccagggga caattcggga
     1501 gctgcgcggg aacgacccga acggtagcgc tggccaccgg gtcgcttagc ttggccgtgg
     1561 cgggaggcag ctgcaacgct tccacgttgt cctcgaggat ggcggagtgg atggcattaa
     1621 gccggggacc tggatcgatg cccagctcgt cgacgagttc ctgacggaac ccgtggtagg
     1681 cggccagggc atcagctcgt cggccgaccc cgtagagggc tcgcatctgg agccctcgca
     1741 gattttccca gcgcggataa gtggcgacca gtcccacgac ctcgctcagc agctcggtaa
     1801 actggcctct ggccagcctg gtctgcaacc gcagttccag ggcgccagcc ttacattcct
     1861 caagccggga tgcctcttgt gcgataaggg gggaactcgg cacatcggcg aggaatggtc
     1921 cccgccacaa gccgatcgcg tcgtcgatca aggcctgggc cgccgacggg tttccggcgc
     1981 ccacggccgc gtgggcttca ctgacctgcc tttcgaacac gtcgaggtcg agatcgcccg
     2041 gccgcaggta cagcacgtac ccagcgggtg ccgtctcgat caggtggccg tcgcgcccgg
     2101 ccttgcacag gccgggacgg agccgacggc ggagctgtga aacgtactga cggataaggt
     2161 tctcggcgga ctcaggaggg tggtcgctcc acaattcgtc gattatccgt tcgacgcgga
     2221 cgatgcggtt ggcgctgatc agaaggatgg ccaggaggct ccggtgctta gcggcgctga
     2281 gtcggcaggc ttcgttaccc ggcactgaag aagggcagag caggggaccg aggagaccaa
     2341 atatcatcgt ccggatcctt tg
//
LOCUS       DASRPQ010000568         1055 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2258889, whole genome shotgun sequence.
ACCESSION   DASRPQ010000568 DASRPQ010000000
VERSION     DASRPQ010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2258889"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            282..1004
                     /locus_tag="VFD73_06730"
     CDS             282..1004
                     /locus_tag="VFD73_06730"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HZI73712.1"
                     /translation="MIVFPGSRGQAAPGISAGHEVRYYKKDFWSKENLKFTRPHFRLR
                     KASHIVRGIAGRREADLLDVGCGPATLMHFLPPNVHYYGVDIAIQDPAPYLLEADLLQ
                     EPIRFGDRRFDIVLAQGFFEYMGEHQDEKLAEIRQVLTGHGRFITSYVNFGHRNKSIY
                     WPYSNIQPMADFRRSLSRQFRIDRSFPTSHNWGHSEPNRWFMQAAQMHLNLNIPVISP
                     MLAVEYFFVCSLPGSVTARHRW"
BASE COUNT          202 a          338 c          316 g          199 t
ORIGIN      
        1 cgacccggcc gccagcatcg cccggctggt ggaaatctac cgattcgcgc tggacaatcc
       61 tgcgcgctag ccagcccggt acgtgtttac ctaccggccc gctagtgttt aaatcccatt
      121 atcccggcgg ccggaatctg tcctttatgc cggtatcgtg cccgctagcg gcacgggacc
      181 aggtgtaatc agcacggcaa tttccgaaaa accagggcca ggccgtgcaa acccgcggca
      241 cggcggtata ctggccgcag gggtcgacgg aggggtgagc catgatcgtt tttcctggct
      301 caaggggaca ggcagcgccg ggcatcagcg caggtcacga agtcaggtac tacaaaaaag
      361 acttctggag caaagaaaat ctaaaattta cccgtcccca cttccgcctg cggaaggcgt
      421 cacatattgt gcgcggcatc gccgggagac gggaagccga tctgctcgat gtgggctgcg
      481 ggcccgcgac gctaatgcat ttcctgccac cgaacgtgca ttattacggc gtcgatatcg
      541 cgatccagga cccggcgcct tacctgctcg aggcggacct cctgcaggag cccatcaggt
      601 ttggcgaccg caggttcgat atcgtcctgg cccagggctt cttcgagtac atgggcgagc
      661 accaggacga gaagctggcc gagatccgtc aggtgctgac gggccacggc cggttcatca
      721 ccagttacgt aaacttcggg caccgcaaca agtcgatcta ctggccgtac agtaatatcc
      781 agccgatggc cgacttccgc cggagcctgt ctcgccagtt ccggatcgac cggtcgttcc
      841 cgacgtctca caactggggg cacagtgagc ccaatcggtg gtttatgcaa gccgcgcaga
      901 tgcacctgaa cctcaacatc ccggtaatca gcccgatgct ggccgtcgag tacttcttcg
      961 tctgctctct cccgggttcg gtcaccgcgc ggcatcgctg gtaaccggcc ggtggtagcc
     1021 cgttccgcgc gggcccggat ctgggccgcc gccgt
//
LOCUS       DASRPQ010000569         1481 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2886652, whole genome shotgun sequence.
ACCESSION   DASRPQ010000569 DASRPQ010000000
VERSION     DASRPQ010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1481
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2886652"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..967)
                     /locus_tag="VFD73_06735"
     CDS             complement(<1..967)
                     /locus_tag="VFD73_06735"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI73713.1"
                     /translation="MALNLAVIPAAQEPTLSTPLRVRLGWIAALAFASGFPFGLVNET
                     VPIFLRVHGASLVDIGQLNKLSLPWSLKWLWAPLVDRHGSRRARIVACLSGVAFLTLL
                     LGHLPLAGSGLWVVLVAIVVLSATQDVAIDAYTIQTTTTRELGVANSVRITLYRIAML
                     MAGGLLIWLAGRIGWQPSFTIGSLVLAGLALCALLLPTVTRTLGTSTNLWEPVRQLFG
                     RKGIWAVIVFTLIFKFDIAALEPMMRPFWVDRGLTLEEIGAVITSGRLIATVAGAAAG
                     GVFTSRYGIFTGLWVLGLVQACSSLGYWATAHAGGAKGLVVAAAYF"
     gene            complement(958..>1481)
                     /locus_tag="VFD73_06740"
     CDS             complement(958..>1481)
                     /locus_tag="VFD73_06740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73714.1"
                     /translation="LMQRLVDAGELTEDEAEQSERRNIILQALGPDPRVKVDLTYQSI
                     RRGDTLILCSDGLSGLVRRDEFAELAGKYPDPQALCAALIDLANERGGPDNITVVTAR
                     FDGQALPEPEGSRGVGYRNYQPPESPPPDTTTESPPPHLKSDSTLSLDRLRNLGLIAI
                     LLGVLMLLLAVWR"
BASE COUNT          315 a          462 c          468 g          236 t
ORIGIN      
        1 cgaaataggc tgctgcaacc acgaggccct ttgctcctcc agcatgagcc gtcgcccagt
       61 atcccagact ggagcacgcc tgaaccagcc caagtaccca gaggccggtg aagatgccgt
      121 acctactcgt gaacacgccg ccggcagcag caccggccac agtcgcgatc aatcggcccg
      181 aggtaatgac cgcgccgatc tcttccaggg tgagaccccg gtcaacccag aacggacgca
      241 tcatcggctc cagcgccgcg atatcgaatt tgaagatcaa ggtaaaaacg atcactgccc
      301 agatgccctt gcggccaaac agctggcgta ccggttccca gaggttggtt gaagttccga
      361 gggtgcgcgt caccgtcgga agcaaaagcg cgcacagcgc cagtcccgcc aggaccagcg
      421 agccaatggt gaagctcggc tgccagccaa tcctgcccgc cagccagatc agcaggccac
      481 cggccatgag catagcgatc cggtataacg tgatgcggac cgagttggcc acacccagct
      541 cgcgggtggt ggtcgtctgg atggtgtagg catcgatcgc gacgtcttgc gttgccgaca
      601 ggaccacaat ggcgaccagc accacccaga gaccggatcc agcgagcggc aggtgtccca
      661 gcagcagcgt cagaaacgct accccggaca gacaagccac gatccgggct cggcgactcc
      721 catgacggtc gaccagaggg gcccagagcc acttgagact ccacggaaga ctcagtttgt
      781 tgagctggcc gatatccacc aggctggcgc cgtgcacccg gagaaaaatg gggacggtct
      841 cgttgaccag accgaagggg aaaccggacg cgaaggcgag cgccgcgatc cagccgagtc
      901 gaactctgag aggggtgctg agagtgggtt cctgcgccgc gggaatgacc gccaagttca
      961 gcgccacacc gcgagcagca gcatcagcac gccgagcagt atcgcgatga ggccgaggtt
     1021 gcggagccga tccagagaaa gggtggagtc ggatttgaga tgcggaggcg gtgattcagt
     1081 cgtggtatcc ggcggcggac tctcgggcgg ctggtagttt cgatatccca ctcctcggga
     1141 accctccggt tcggggaggg cctggccatc gaagcgggcg gtgaccaccg tgatattgtc
     1201 tgggcctccc cgttcgtttg ccaggtcgat caaggcagcg cagagcgctt gagggtcagg
     1261 atatttcccg gccagttcgg caaactcatc gcgccgtacc agcccggaca aaccatcaga
     1321 acaaagaatc agggtgtcgc ctcggcggat ggactgatac gtcaggtcca ctttgacccg
     1381 gggatcaggc cccagtgcct gtaggatgat gttgcggcgc tcgctctgct ctgcttcgtc
     1441 ttcggtcagc tctccggcgt cgaccagccg ctgcataagg c
//
LOCUS       DASRPQ010000570         3685 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3830971, whole genome shotgun sequence.
ACCESSION   DASRPQ010000570 DASRPQ010000000
VERSION     DASRPQ010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3685
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3830971"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..832
                     /locus_tag="VFD73_06745"
     CDS             <1..832
                     /locus_tag="VFD73_06745"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI73715.1"
                     /translation="AERVFEFLDQPPSEVDRPDEQEARFEREIVFERVSFRYGDGDLV
                     LSEVSFRLPKGKVIALVGPSGAGKTTIADLLPRFYDPTDGQILMDGVPLTRIRRGALR
                     GLLGVVSQDTVLINDSVRANIAYGSPQASPEQVEDAARAANAAGFIETLPNGYDTTLG
                     ERGTRLSGGQRQRIAIARALLRDPPILILDEATSALDTESERLVQQAIARLMRERTVL
                     VIAHRLATVRDADEIVVLDAGQVVQRGSHEELLRIGGLYRRLYDLQFRREEPALAAEL
                     "
     gene            complement(833..1771)
                     /locus_tag="VFD73_06750"
     CDS             complement(833..1771)
                     /locus_tag="VFD73_06750"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI73716.1"
                     /translation="MHVALYTHSRLPVRGYGGTQRVVVWLARGLAQLGHRVTLIAPAG
                     SAVPEASLIALDPREVIRPGFDVSPHVPADADLLHAHTPLTTAPQQPHVFTLHGNRRM
                     WEPATPNTIFLSRDHARRHGGAAFVYNGVDPADFVYREEKAAYDLFLGRLHSAKGYRW
                     AIEGAKLADKRLVVAGGWRPSVRPSLRFVGSVDGQRKAALLANAQCLWMPALWDEPFG
                     LTLVEGMMSGTPVLGTRRGALPEVVSSETGALGDTLEDLVRLRATIDRLDPAACRARA
                     ERWFSHLRMAQEYVRMYRHYLETSSVPEGRVIQPNG"
     gene            1822..2901
                     /locus_tag="VFD73_06755"
     CDS             1822..2901
                     /locus_tag="VFD73_06755"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HZI73717.1"
                     /translation="MLSVMQVLHQGGGAGSVTSTLHLSLGLTRAGVHVRFVCPPHSEV
                     EALAKAEGLEVHPLALEPKQRRENAAYLSALLQRHPVDLVNSQSARDRQALTWLALTR
                     RLPVPLVATRRQMPHTFPVENWVMSRVAARVIAVSRAVGEALVRRGTPRRKLAIIPNG
                     LVTQRVDRPVSEESREEWRRRIGWDGHRPVVGIVSRPKDQEVVLKALESVTTPIRLVL
                     AGVDPSTRLGNLGRRAPEQHAVVCVPFTPDVRPLYDLLDLVLLPSRSEGLSQSLLEAM
                     ALGKPVIASAATGNLEVITNGIDGRLVAPGQPDAWADAIQQLLDNPTEAERLGSAGRK
                     TARERFPLSLTVDRTIALYRTILDR"
     gene            2976..>3685
                     /locus_tag="VFD73_06760"
     CDS             2976..>3685
                     /locus_tag="VFD73_06760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73718.1"
                     /translation="MVKLSGFTIVRNGVKLDFPVIASIKSLLPICDEVVVNVGKSEDD
                     TLDVVRSIGDPRIRVIESDWDMTIKNQVLADETLRAMRACRYSWGIYIQADEVLHESG
                     AELLARAVQEHDRDHRVEGLLVKYLHFYGDLETIALNRRWYRREVRAVRLDPALDIRP
                     YQGAQGFRVGPTFRKIRARLTQAQMFHYGWARPAQALRTKREVSQVLYPWSKDRQAGR
                     PLLPWFPGLRPFRGTHPAV"
BASE COUNT          659 a         1141 c         1216 g          669 t
ORIGIN      
        1 cgcggaacgc gtcttcgaat ttctggatca gccgcccagc gaggtggacc gtcctgatga
       61 acaggaggcc cggttcgagc gcgagatcgt gttcgagcgg gtctccttcc ggtacggcga
      121 cggcgatctg gtgctgagtg aagtctcgtt ccggttgccg aaggggaagg tgatcgcgct
      181 ggtcggtcca tctggtgccg ggaagaccac gatcgccgac ctgctcccgc gcttttacga
      241 cccaaccgat gggcagatcc tgatggacgg ggttccgctc acccgtattc gccgaggggc
      301 tctgcgcggt ctcctcggtg ttgtcagtca ggacacggta ctgatcaacg attcggttcg
      361 ggcaaacatc gcctacggct cacctcaggc ctcgccggag caggtcgaag atgcggcgcg
      421 ggcggccaat gcggctgggt tcatcgaaac tctgccgaac ggctacgata ccacattggg
      481 tgagcgcggc acccgtctct ccggtggcca gcgccagcgg atcgcgattg cccgggcact
      541 gcttcgagac cctccgatcc tgattctcga cgaggccacc agcgcactgg acacggagtc
      601 ggaacggctg gtgcagcagg ccatcgcccg gttgatgcgg gaacggacgg tcctcgtgat
      661 cgcccatcgt ctggccacgg ttcgggatgc cgatgagatc gtggtcctgg atgcagggca
      721 ggtagtgcag cggggcagcc acgaagagtt gttgcggatc ggaggtcttt accggcggct
      781 gtatgacttg cagttccgga gggaagaacc agctctggca gcagagctct gatcagccgt
      841 ttggctggat gactcggcct tccggtacgc tgctggtctc cagatagtgc cggtacatac
      901 ggacgtattc ctgggccatc cgcagatggc tgaaccagcg ttcggctcga gcccgacaag
      961 cggcaggatc cagccgatcg attgttgcgc ggaggcgtac caggtcttcc agcgtgtcgc
     1021 ccagggctcc ggtctcagac gacaccacct cgggcagtgc gcctcggcga gtccccagca
     1081 ccggggtgcc gctcatcata ccctccacca gagtgaggcc aaacggctcg tcccatagcg
     1141 cgggcatcca gagacattgg gcgttggcca ggagagcggc cttgcgctgg ccgtctaccg
     1201 accccacgaa gcgaagcgag ggtcggacgc tgggacgcca cccgccggca acgacgagcc
     1261 gcttgtccgc gagtttggcc ccctcgatgg cccagcgata ccctttagcg ctgtgcagcc
     1321 ggcccagaaa tagatcgtat gccgcctttt cttcgcggta tacaaaatcg gccgggtcga
     1381 ccccgttata cacaaaggct gcgccaccat gcctgcgcgc gtgatcccgg ctcaggaaga
     1441 tcgtgttcgg agtggccggc tcccacatcc gacggttccc gtgcagcgtg aacacgtgcg
     1501 gctgttgcgg cgcagtggtg agcggtgtgt gagcgtggag caggtcggca tctgcgggaa
     1561 catggggact gacgtcgaat cctggacgaa tgacttcgcg cgggtccagt gctatcagcg
     1621 acgcttccgg cacagcgctg ccggccggcg ctatcagcgt cacccgatgg ccgagttggg
     1681 cgagtccccg cgccaaccag accacgacgc gttgggttcc gccgtaccct cgaaccggca
     1741 agcgactgtg ggtgtacagc gccacatgca tggtggcgca atgtacgggc ggcgttcgcg
     1801 gccgggcaat cgacggtgca gatgctcagc gtaatgcagg tgctgcatca aggcgggggc
     1861 gccggatcgg tgacctcgac gctgcacctg agcctgggac tcacccgggc cggagttcac
     1921 gtccgcttcg tttgcccgcc gcactcagag gtcgaggctc tggccaaagc tgaagggctc
     1981 gaggtccatc cgttggcgct cgagcccaaa cagcgtcgag agaacgcagc gtatctgagt
     2041 gcgctgctgc agcggcaccc ggtagatctg gtcaactccc aaagcgccag ggatcgacaa
     2101 gcactcacct ggctggcact cactcggcgg ctccctgtgc ccctggtcgc cactcggcgg
     2161 cagatgccgc acacctttcc ggtagagaac tgggtgatga gccgggttgc cgcgagggtg
     2221 atcgcggtca gccgcgcggt cggcgaagcg ttggttcgcc gggggacgcc ccggcggaaa
     2281 ttggcgatca taccgaacgg actggtaacg caacgggtag atcgtcccgt cagcgaggag
     2341 agcagggaag agtggcgccg gcggattggg tgggacggtc accggccagt ggtcgggatc
     2401 gtctctcggc ccaaggatca ggaagtggtt ctgaaggcgc tcgagtcggt gactacgcca
     2461 atacgactgg tattagctgg agtagacccc agcacccgac tcggcaatct cgggcgccga
     2521 gctcccgaac aacacgccgt tgtgtgcgtg cccttcactc ccgatgtgcg gccgctgtat
     2581 gacctgctcg acctcgtctt gcttccatca cgttcggagg ggctctccca atcattgctg
     2641 gaagcgatgg cattgggaaa accagtcatt gcctcagccg ctaccggcaa tctggaagtg
     2701 atcaccaatg gcatcgacgg tcgtctggtt gccccagggc aaccggacgc ctgggcagat
     2761 gccatacagc aactgctcga caatccgact gaggctgagc ggctggggag cgccgggcgg
     2821 aaaaccgcgc gggaacgctt tccgctgtcg ctcaccgtgg atcgtacgat tgccctctat
     2881 cgcacgatcc tcgatcgcta gccgatccgt tgcttggccc cggccccggg ggcaaattct
     2941 tccatcacag acacccatag aggagaaggc gcggcgtggt caagctgtcc gggtttacca
     3001 tcgttcgaaa cggggtgaag ctcgatttcc cggtcatcgc gagcatcaag tccctgcttc
     3061 ccatctgcga cgaagtcgtc gtcaacgtcg gcaaatccga agacgatacc ctggacgtgg
     3121 ttcgctcgat cggagatccc cgaatccggg tcatcgagag cgactgggat atgaccatca
     3181 agaaccaggt gctggctgat gagacgctgc gcgcgatgcg ggcgtgtcgc tactcatggg
     3241 ggatttacat ccaggccgac gaggtgctcc atgaaagtgg ggctgagttg cttgcccgag
     3301 cggtccagga gcacgatcgt gaccaccggg tggaaggttt gctggtcaag tacctccatt
     3361 tctatgggga tctcgagacg atcgccctga accgccgttg gtatcgtcgt gaggtccgcg
     3421 cggtacgact cgaccccgcc ttggacatcc gaccgtacca aggcgcacag gggtttcgag
     3481 tggggcctac ctttcgaaag atccgcgccc ggctgacgca ggctcagatg ttccactacg
     3541 gctgggccag gccggcccag gcgctccgaa ctaagcggga agtaagccag gtactgtatc
     3601 cgtggtcgaa ggaccgtcag gccggtcggc cgctcttgcc gtggttcccc ggactccgcc
     3661 ccttccgggg gacgcatccg gccgt
//
LOCUS       DASRPQ010000571         1489 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1954513, whole genome shotgun sequence.
ACCESSION   DASRPQ010000571 DASRPQ010000000
VERSION     DASRPQ010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1489
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1954513"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..634
                     /locus_tag="VFD73_06765"
     CDS             <1..634
                     /locus_tag="VFD73_06765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73719.1"
                     /translation="QAKFDKILRPIAGELVADDQQSHITFDAFFSNVMFHEVAHGLGI
                     KNTVNGKGTVRDALKEQHGALEEGKADILGLYMITQLHRRGELKGQSLDDNYVTFMAS
                     IFRSIRFGASNAHGKANAAQFSFFQERGAFIRDSASGKYRVNFEKMGSAVDALARQIL
                     EFQGNGDYAGVSRFLSERGKLSRTLQLDLARLGSKGIPVDIVFDRGREAQ"
     gene            634..1473
                     /locus_tag="VFD73_06770"
     CDS             634..1473
                     /locus_tag="VFD73_06770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73720.1"
                     /translation="MALTSDEQPIEPEVRVHSVRRRRSKRPAPLTPPPPNVRGWLIYI
                     ALALLVAALMLDGYLRHRPDHALLPTYSQATEVHSNVAEVADSLQVVVAWELTLADST
                     RRPDSVRIKVVIGNRPDSQISVQPSSQLSDTLYLPAPQAGQTLSGVSCAAAEHPGLPL
                     EESCTPWEFVRPSAVTAQATPNQATSPNQIVVQPSGLQVDPDVGGKCARWQQEHPNAS
                     VWITVNEKAVPECTGPNHKPTVAQFCAFVVLPDGRRMKAANSANNPYCDELFEEWSRE
                     RYS"
BASE COUNT          285 a          452 c          476 g          276 t
ORIGIN      
        1 gcaggcaaag ttcgacaaga tattgcggcc gattgccgga gagctcgtcg cagatgatca
       61 acagagtcac atcactttcg acgccttctt ctccaacgtg atgttccacg aggtggctca
      121 tgggctgggg atcaagaaca ccgtgaacgg caagggaacg gtccgggacg ctctcaagga
      181 gcagcacggg gccctcgagg agggcaaggc cgacatcctg ggcctctaca tgatcaccca
      241 gctgcatcgc cgtggtgagc tcaaggggca gagtctcgac gacaactacg tcactttcat
      301 ggccagcatc tttcgctcca tccgctttgg cgcgtcgaac gcgcacggga aggccaatgc
      361 ggctcagttc tcatttttcc aggagcgggg agcgttcatc cgagattcgg ccagcggcaa
      421 gtatcgggtg aacttcgaga agatgggttc ggcggtggac gcgctcgccc ggcagattct
      481 ggagttccag ggcaacggcg actacgccgg cgtcagtcgg ttcctgagcg aacgaggcaa
      541 gttgtcccgc actcttcagc tcgatctcgc gcggctcggc tccaagggga ttccggtgga
      601 catcgttttc gatcgaggcc gtgaggccca gtaatggcgc tgacctcgga tgagcagccg
      661 atcgagcccg aagtccgggt ccacagtgtg cggcggagaa gaagcaaacg gcccgcgcct
      721 ctgactccgc cgccgccgaa tgtgcgcggc tggttgatct acatcgcgct ggccctgctg
      781 gtcgccgccc tgatgctgga cggatacctc cgtcaccgtc cggatcatgc cctgctgccg
      841 acgtattcac aggcaacaga ggtgcactcg aacgtggccg aggtggcgga ttcgctccag
      901 gtggtggtcg cctgggaact aactctggcc gattccacgc ggcgccctga ttcggtccgg
      961 atcaaggtgg tcatcggcaa tcggccggat agccagatct cggttcagcc atcgagtcag
     1021 ctgtcggata cgctctatct acctgcgcct caggcaggac agacgctgag cggggtttcc
     1081 tgtgccgcgg cggaacaccc tggtctgccg ctggaggaaa gctgcacgcc ttgggagttc
     1141 gtccggccca gcgccgtcac ggctcaggcc accccaaatc aggcgacttc acctaatcag
     1201 atcgtggtgc agccctcggg gctccaggtg gatcccgacg tcggagggaa atgcgctcgc
     1261 tggcagcaag agcacccgaa tgcctcggtc tggatcaccg tcaatgagaa agcggtcccg
     1321 gagtgcaccg ggcccaatca caagccgacc gtggcgcagt tttgcgcctt tgttgtgctt
     1381 ccggatggca ggcggatgaa ggccgcgaac tcggccaata acccttactg cgacgagctg
     1441 ttcgaggagt ggagccggga acgatattcc tgactggaat cctgccgca
//
LOCUS       DASRPQ010000572         2331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3831075, whole genome shotgun sequence.
ACCESSION   DASRPQ010000572 DASRPQ010000000
VERSION     DASRPQ010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2331
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3831075"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2331
                     /gene="dnaE"
                     /locus_tag="VFD73_06775"
     CDS             <1..>2331
                     /gene="dnaE"
                     /locus_tag="VFD73_06775"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HZI73721.1"
                     /translation="FGIGIGSPEALAEAAAERGFKALACTDTNGVYGAVEFQRACAAA
                     GVRPILGAHLVWQGQEAVALAADEGGWGALCRAITAIHWQSTAPEGDRIDAGATPLRL
                     SHTLARDREGLILLSQDLVLLEEILRLSGPVDLYAELRPGKGRHRVLGAARRLGLPVV
                     VTNGVVARDAGDWPLHRLLRAIALNTTLSTLASTDVWPEHAWLAPGSHLARHFPDCPE
                     ALRAAEEIAERCTYAIPIGSRIVPPRVSDTRGAFDQLRDLTLTGARWRYPEMTPELRD
                     RLDMELGVIAQKGFADYFLVVRDIVRKGPTHCGRGSVANSVVSYCLGITHVDPLAARL
                     VFERFLNLERRDPPDIDLDFPWDERDQVLEYVFRRYPDLHSAMVANHNCFQPRGALRE
                     VAKVHGRPAGEIREVTRRIPFFERGERLADMIAVHPNFRSLHLTEQWQELAEVAEKLI
                     GIPRHLSVHAGGVVITPTPLTDYVPVERAVKTLANDPTLPVPVIQFEKDGTEDAGLVK
                     IDLLGNRSLAVIRDAIQAVHGNTGHQIDYTSSTAGNDEAAKALFRSGQTMGVFYTESP
                     ASRLLCAKSQADTFELLVLNTSMIRPASNKYIQIYLDRLRNQTPYEPLHPSLRDTLSE
                     SFGIMVYQEDVVNVCSTFAGMSPAVADGLRKALSKKRPAKHLAAYAEDFFAGARQLGR
                     DPDSAKQVWEMIMSFAGYSFCKGHSCSYIQVAQHSCALRAHHPAEFMAAVLSNGGGFY
                     QPFAYIAEAMRMGLKILPPDVNASEFRCSGQGREIR"
BASE COUNT          411 a          716 c          748 g          456 t
ORIGIN      
        1 cctttggcat tggcatcggc agtcctgaag cgctggcaga ggccgccgcg gagcggggct
       61 tcaaggcact ggcgtgcacc gataccaacg gagtgtatgg cgcggtggag tttcagcgcg
      121 cctgtgcggc ggcgggcgtg cggccgatcc tgggtgctca tctggtgtgg caaggacagg
      181 aggccgtggc gctcgcggcg gatgaggggg gatggggagc gctctgtcga gccattacgg
      241 caatccattg gcagagcacg gcacccgaag gtgatcggat cgatgcgggc gccacgccgc
      301 tccgcctgtc ccacaccctc gcgcgcgatc gtgagggcct cattctcctg tctcaggatc
      361 tggtccttct ggaggagatc ctccgactga gcggtcccgt ggatctctat gccgagctca
      421 ggcctgggaa aggtcggcat cgagtactgg gcgctgcccg gcgactcggc ctgccggtgg
      481 tggtcaccaa cggagtggtg gcacgggacg ccggggactg gccactccac cggttgttgc
      541 gagcgatagc gctcaacacc acgctgtcca ccttggcgtc aaccgatgtc tggccggagc
      601 atgcctggct cgctcccggt tcccatcttg cccgccattt cccggactgt cccgaggcgc
      661 ttcgggcagc cgaagagatt gccgagcgat gtacctatgc cattccaatc ggctcgcgga
      721 ttgtccctcc tcgtgttagc gacactcggg gtgctttcga tcagctccga gacctgactc
      781 ttacgggagc gcggtggcga tatccggaaa tgactccgga actgcgggac cggctcgaca
      841 tggagttggg agtcatcgca cagaaagggt tcgccgacta cttcctggtg gtgcgtgaca
      901 tcgtccgcaa ggggccgacg cattgtgggc ggggatcggt ggccaactcg gtcgtcagct
      961 attgtctcgg gataacgcat gtcgacccgc tcgccgccag gctggtgttc gagcggttcc
     1021 tcaacctgga gaggcgggat ccgcccgaca tcgatctgga ttttccctgg gacgaacggg
     1081 atcaggtgct ggaatacgtc ttccgccggt accctgacct ccactctgcc atggtggcga
     1141 atcacaattg ctttcagccc cggggcgcgc tgcgcgaggt cgccaaggtg cacgggaggc
     1201 cggcaggcga aattcgagaa gtcacccggc gcattccctt cttcgagcgt ggcgagcgcc
     1261 tggcggatat gatcgcggtg cacccgaact ttcggagcct gcatctcacc gaacagtggc
     1321 aggagctcgc tgaagtggct gaaaagctga tcgggattcc tcggcatctc tcggtgcatg
     1381 ccggtggtgt cgtgattacc ccgactccgc tcaccgacta tgtgccggtg gagcgcgcgg
     1441 tcaaaacgct ggccaacgat cccacgttac cggttccggt gattcaattc gagaaggacg
     1501 gcaccgagga tgccggtctg gtcaagatcg acttgttggg gaatcgctcg ctcgcggtga
     1561 ttcgcgacgc cattcaggca gtgcacggca acaccggtca ccagatcgac tatacctcgt
     1621 ccaccgccgg caatgacgaa gcggcaaagg cactgtttcg aagcggccag accatgggcg
     1681 ttttctatac cgaatcgccg gcctctcgcc tgctctgcgc caagagccag gccgacacgt
     1741 tcgagttact ggtcctcaac accagcatga tccgacccgc ctcgaacaag tacatccaga
     1801 tctatctgga ccgtctccgg aatcagacgc cctacgagcc gctccatcca tcgctccggg
     1861 ataccctgtc cgaatcgttc gggatcatgg tctatcagga agacgtggtg aacgtctgca
     1921 gcacatttgc gggaatgtct ccggcggtgg cagatggcct ccggaaggcg ctctccaaga
     1981 agcgcccggc caagcacctc gctgcctacg ccgaagactt tttcgcgggg gcgcgtcagc
     2041 tgggccgcga tcctgactca gccaagcagg tctgggagat gattatgtcc tttgccgggt
     2101 acagcttctg caagggacac tcgtgctcat acatccaggt cgcccagcat tcctgtgccc
     2161 tgcgggcgca tcatcccgct gagttcatgg ccgcggtgct ctccaatggc ggtgggttct
     2221 atcagccgtt cgcgtatatc gcagaagcga tgcggatggg actgaagatc cttccgcccg
     2281 acgtgaacgc cagtgagttt cgctgcagtg ggcaaggcag ggagattcgc a
//
LOCUS       DASRPQ010000573         2062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_66297, whole genome shotgun sequence.
ACCESSION   DASRPQ010000573 DASRPQ010000000
VERSION     DASRPQ010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66297"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2042)
                     /locus_tag="VFD73_06780"
     CDS             complement(<1..2042)
                     /locus_tag="VFD73_06780"
                     /inference="COORDINATES: protein motif:HMM:NF020083.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73722.1"
                     /translation="MLSQHIVAETAAEDWKEEELFLLFRRAYPYRHLERSEFADVVRM
                     LAQGFATRRGRRAALIHHDAINGRIRARRGARLLAITSGGAIPDNADYRVVLEPDNTF
                     IGTVNEDFAVESLQGDIFQLGNTSWRILQVAQGTVRVEDARGQPPSIPFWLGESPARS
                     NELSTAVSEIRRGVEERLPDKEQALQWISSVLTSPDSEAIQGAGAGDPTVAAQQLVEY
                     LAESKRMLGNLPTQSTVIAERFFDEAGGMQLVIHAPFGSRVNRAWGLALRKRFCRQFN
                     FELQAAATEDALLLSLGPQHSFPLESVFQFLHPETVGEILVQALLDAPMFGTHWRWNG
                     NIALAIPRSRGGRKMPPQIQRMQADDLLAAAFPDAAACLENIPGDREIPDHPLVRQTI
                     DDCVHEVMDLDGLQEILHRIRSGQIRLVARDLPEPSPLAHEILNARPYAFLDDAPLEE
                     RRTQAVYTRRAFEPSSADDLGALDPSAIARVREEAWPDVQNADELHDALLTSGFLTEV
                     EGLSGSSNGSWGSMFRELVRDGRADRVELGSRKAVWVATERLAEVRAIHPAGEVREMD
                     SGPVTREDAVRELLRGRLAITGPSTSEELGNVLGTPQSDADVALAALEGEGVILRGHF
                     TAEESALEWCDRRLLARIHRYTLNRLRAEIEPVSAADFMRFLFAWQRLDSEHRVAGL"
BASE COUNT          377 a          674 c          649 g          362 t
ORIGIN      
        1 agcccggcga cgcgatgctc tgaatccagc cgctgccaag cgaagaggaa gcgcatgaag
       61 tccgctgcac tgaccggttc gatttccgcc cgcaaccgat tgagcgtata gcgatgaatc
      121 cgggccagga gccgccggtc acaccactcc agcgcggact cctcggcggt aaagtgcccc
      181 cgcaggatca cgccctcacc ctccagcgcg gccaaggcca catcggcatc ggactgggga
      241 gtgcccagaa cgttcccaag ctcctccgag gtgctcggtc ctgtgatcgc gaggcggcct
      301 cgcagcagct cacgcacggc atcttcccgc gtgacggggc cgctgtccat ttccctcact
      361 tcgccggcgg gatgaatagc cctgacctcg gcgaggcgtt cagtggccac ccagacggcc
      421 ttcctgctcc cgagctcgac ccggtcggca cgaccgtcac gaaccagctc gcggaacatc
      481 gacccccagg aaccgttgga gctgcctgac agcccctcga cttcggtcag gaaccccgag
      541 gtgaggagtg cgtcgtgcag ctcgtcggca ttctgaacat cgggccacgc ctcttcacgg
      601 acccgcgcaa ttgccgaggg atcgagggcg cccagatcgt cagccgacga tggctcgaag
      661 gcgcgccggg tgtacaccgc ctgagtccgg cgctcctcta acggcgcgtc gtcgagaaac
      721 gcgtatggtc tcgcgttcaa aatctcgtgt gctaatggcg agggctccgg aaggtcccgc
      781 gcgaccagcc ggatctggcc ggagcggatc cggtggagga tttcctgcag cccatcgaga
      841 tccatcacct catgcacgca gtcgtcgatg gtttgccgga ccaggggatg gtctgggatc
      901 tcgcggtccc caggaatgtt ctccaggcat gccgcggcgt cggggaatgc cgccgcaagc
      961 agatcgtccg cctgcatgcg ctggatctgg ggcggcatct tccggccacc ccgactccgc
     1021 ggaattgcga gcgcgatatt tccgttccag cgccagtggg tgccaaacat cggcgcatcg
     1081 agcagtgcct gaaccaggat ctctcccacg gtttcaggat ggagaaactg gaagacgctc
     1141 tcgagaggga aagagtgctg cgggcccaag gagagcaaca gcgcatcttc ggtggctgcg
     1201 gcctggagct caaagttgaa ttgccggcag aaacgcttgc gaagcgcgag gccccaggcc
     1261 cgattcaccc ggcttccgaa cggcgcgtgg atgaccagct gcatgccacc cgcctcgtcg
     1321 aagaagcgtt ccgcgatcac ggtggattgg gtgggaagat tgcccagcat gcgtttggat
     1381 tcggccaggt attcaaccag ctgctgcgct gccaccgtgg ggtcgcctgc tcccgcgccc
     1441 tggatggcct cggaatcagg tgaggtcaag acagaggaga tccactggag tgcctgctct
     1501 ttgtcgggca gcctctcctc cactccgcgt ctgatctccg agaccgcggt ggagagctcg
     1561 ttgcttcgcg cgggtgattc acccagccag aacggaatgc tgggtggctg accgcgggca
     1621 tcttcgaccc gcaccgtccc ctgcgctacc tggagaattc gccaggaggt gttgcccagc
     1681 tggaagatgt caccctgcaa actctcgacg gcgaagtctt cgttcaccgt tccgataaac
     1741 gtgttatccg gctccagaac cacccgatag tcggcattgt ccggaatcgc cccgcccgag
     1801 gtgatcgcca acaagcgggc tccgcggcga gcccggattc tgccgtttat cgcgtcgtgg
     1861 tggatcaatg cagccctgcg gccgcgacgg gtggcaaagc cctgggccag catccgaaca
     1921 acatcggcga actcgctgcg ctcgagatga cggtacggat aggctcggcg aaagaggagg
     1981 aagagctcct cttccttcca atcttcggct gcggtttcgg ccacgatgtg ctgggaaagc
     2041 acgtcgagag gcttctctcg ca
//
LOCUS       DASRPQ010000574         1166 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4455190, whole genome shotgun sequence.
ACCESSION   DASRPQ010000574 DASRPQ010000000
VERSION     DASRPQ010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1166
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4455190"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..560)
                     /locus_tag="VFD73_06785"
     CDS             complement(<1..560)
                     /locus_tag="VFD73_06785"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI73723.1"
                     /translation="MLPVPPILMQWLAPFAAFFTKPTWDRVLVLVTGAVLAPGRRTVT
                     AVLSVLGRRDRTDFARFHGVLNRARWSGRSLARALLRWLVTVFVPDGPVVVGIDETIE
                     RRWGPKISARGIYRDPVRSSHGHFVKASGLRWISVMLLVHIPWAGRIWGLPFLTTLAP
                     SERFARQAGRRHKPLADWGRQLLLLA"
     gene            615..899
                     /locus_tag="VFD73_06790"
     CDS             615..899
                     /locus_tag="VFD73_06790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73724.1"
                     /translation="MARPDPMLERIEAFNRSWGGGVVVRRAANGYSLYSERSGGPVAR
                     LKPTGEDDKVRVLAWHCGKWGASGPFDVPTMTLDRALDYVASNPFFWIHA"
BASE COUNT          244 a          383 c          352 g          187 t
ORIGIN      
        1 ctggccagaa gcagcaactg ccggccccag tcggccaacg gcttgtggcg ccggccagcc
       61 tgccgggcaa aacgttccga gggggcgagc gttgtcagga acggcagccc ccagatccgc
      121 ccggcccacg ggatatggac cagcaacata acgctgatcc agcgcagccc gctggccttg
      181 acaaagtggc cgtgcgagga gcgcaccggg tctctgtaga tgccgcgcgc cgagatcttc
      241 ggcccccagc gccgctcgat cgtctcgtcg atcccaacca ccaccggacc atccggaaca
      301 aacaccgtga ccagccagcg cagcagggcg cgggccagtg accgcccgga ccagcgggcg
      361 cggttgagca caccatggaa gcgggcgaaa tccgtcctat ctcgccgtcc gagcaccgac
      421 agcacggcgg ttacggtgcg ccgtccagga gccagaacgg cgccggtcac cagaaccagg
      481 acacgatccc aggtcggttt ggtgaagaag gcggcgaacg gagccagcca ctgcatcagg
      541 atcggcggga cgggcagcat cgacgatctc cggttgttta tggcggacaa ccgtcgtcga
      601 gcgggagctt caccatggcc cgacccgatc cgatgctgga gcgtatcgaa gccttcaacc
      661 gcagctgggg cggcggcgtg gtcgtacgcc gtgccgccaa tgggtactcg ctctacagcg
      721 agcgctcggg cggaccggtc gcccgcctca agccgaccgg cgaggacgac aaggtccgcg
      781 tgctggcctg gcactgcggg aaatggggcg ccagtggacc gttcgacgtt cccaccatga
      841 cgctcgaccg cgccctcgac tatgtcgcgt caaacccctt cttctggatt cacgcttaat
      901 ccaaccaaaa aatgcgcaaa gtcgagctaa gacgaggttt agaaactcca gtaatggtca
      961 attgaagcat ggctcctgta ctgcaccgga gcacatcatc caattagtgg gttattaaca
     1021 ccaatgcctt ggttgtcttc agcgctggta ttccacagca tgaatgtccc agaacatggc
     1081 catcccagtg aaaaccatca tccatccgag ggtcgcgtgg ccggtaatcg ctcttccaca
     1141 gtcgccgtga ttataaagct cgctct
//
LOCUS       DASRPQ010000575         1142 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1006912, whole genome shotgun sequence.
ACCESSION   DASRPQ010000575 DASRPQ010000000
VERSION     DASRPQ010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1006912"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..211)
                     /locus_tag="VFD73_06795"
     CDS             complement(<1..211)
                     /locus_tag="VFD73_06795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI73725.1"
                     /translation="MKRYELTDAQGQRLEPLRPPERPWTGRPNHSHRTLLNGILWILR
                     TGAPWRDLPERYGPVGTVSSRFYRWR"
     gene            663..>1142
                     /gene="wrbA"
                     /locus_tag="VFD73_06800"
     CDS             663..>1142
                     /gene="wrbA"
                     /locus_tag="VFD73_06800"
                     /EC_number="1.6.5.2"
                     /inference="COORDINATES: protein motif:HMM:NF002999.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003955 - NAD(P)H dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H:quinone oxidoreductase"
                     /protein_id="HZI73726.1"
                     /translation="MTKVLVLYYSTYGHMEQMANAAVEGARETGAEAVVKRVPELVPE
                     EVARKSGFKLDQPAPIATVNELPDYDAIILGIPTRYGRMSSQIANFLDQTGGLWARGA
                     LNGKVGSVMSSTATQHGGQETTLFSGITNLLHLGLVIVGLPYSYQGQMTLDEIVGGSP
                     "
BASE COUNT          220 a          358 c          374 g          190 t
ORIGIN      
        1 tgcgccaacg gtaaaatcgg ctcgacacgg tcccgaccgg gccgtagcgc tcgggcaggt
       61 cacgccaggg cgcgcccgtg cgcaagatcc acaaaatccc gttcaggagg gtgcggtggc
      121 tgtggttcgg gcgacccgtc cagggtcgct cagggggccg aagcggctcc aaacgctgcc
      181 cctgcgcatc cgtcaactcg taacgcttca cgcccgctag atgggggcgc ccaccccact
      241 gcgcaccctt gcagacacgc cctagtatgc tgcgcgggat gatgatcatg gagccgcagc
      301 gggccgtcat gctaggacag cgccgcgcgc cggaggcgga cgagattgag acgcgggccc
      361 gaaattgcgc tcgcattttt ctagagggct gtcggttgaa gccccatagg cgtgaactct
      421 gttgatggga gccagcgagg ccatcgcctt ggatcataca cgggctctcg gcggagtgct
      481 gcgggtcaga aacctgaacc gccccaaggc cgaacaggcc agagctctaa agtagcattg
      541 ccggttcagc ctcgcccata atcgagttca acggctgcca attaaggccg catctctgag
      601 accagtccac aaaggctgct gttgccctat gttgccacag ccaacagcgc ggagattgat
      661 caatgacgaa agttcttgtg ctctactact cgacgtacgg acacatggag cagatggcga
      721 acgccgctgt ggagggcgcc cgcgagactg gggctgaggc cgtggtgaag cgcgtgccgg
      781 agctggtgcc cgaggaggtc gcccgcaagt cgggcttcaa gctcgaccag ccggcgccga
      841 ttgcgaccgt gaacgaactg ccggactacg acgccatcat tctcggcatc ccgacccggt
      901 acggccgcat gagttcgcag atagccaact tcctggatca gacgggcggg ctctgggcgc
      961 ggggtgcgct caacggcaag gtcggcagcg tgatgtcctc gaccgcgacc cagcacggcg
     1021 gccaggagac gaccctgttc tcggggatca ccaacctgct gcatctcggt ctagtgatcg
     1081 tcgggctacc ctattcgtac caggggcaga tgacgttgga cgagatcgtc ggcggatcgc
     1141 cg
//
LOCUS       DASRPQ010000576         2034 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1321019, whole genome shotgun sequence.
ACCESSION   DASRPQ010000576 DASRPQ010000000
VERSION     DASRPQ010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2034
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1321019"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..315
                     /locus_tag="VFD73_06805"
     CDS             <1..315
                     /locus_tag="VFD73_06805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73727.1"
                     /translation="ALESAVLAAVLSLRGEPIAPEGIVSRVLSPPAPPSTIPVSVFLL
                     LPEEQDTNTAITTTGVKTVRITQPPEQNADHLALTRCLNGVNRCRSPTNTRVNGDHLK
                     MN"
     gene            complement(347..>2034)
                     /locus_tag="VFD73_06810"
     CDS             complement(347..>2034)
                     /locus_tag="VFD73_06810"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HZI73728.1"
                     /translation="ALAGESVTYEWTLHSKNGLRHMQTTLSPLHGPYGEITGIVGVGR
                     DITQRVEVGKELQRWARIFEHAGWGVAIVSADGGTIESVNPAFAAMHGWTVEELRGKP
                     MIELSAGQSDFPRMNPLYDARGHQIWETERLHRNGTVFPALIDATAVKDENGQVTYYA
                     VNVQDLTERRRAEEQVRQAQKMEAVGRLAGGVAHDFNNMMMIIMGFSDFLLTTLDSTD
                     PRWADADEIRKAADRAMHLTRQLLGFGRQQLVARHVLNLNEVISGMERMLRPLLGEDI
                     PLVTRLSSGLGGVEADYGQMEQVIMNLALNARDAMRGGGCLTIETLDVELPQGYAYRK
                     IGIDIPPGPYVMLLVSDTGHGMTPEVKARLFEPFFTTKPATQNTGLGLATVYGIVAQS
                     AGYIWVDSEVEKGTTFKICFPRVEHEDDAVDHPVEAAQPTRGSETILIVEDEDAVRSV
                     AARVLGNQGYQIIRAARGEEALALVEELEGKVDLVLTDIVMPGMGGLELSGRLRKWWP
                     DLEVLYMSGYAEGDKLEPGLHDSTQAFLQKPFSADSLVHKVREVLDAKQRRGL"
BASE COUNT          376 a          661 c          588 g          409 t
ORIGIN      
        1 gcgctcgaat cggccgtcct ggcggcggta ctatcgcttc ggggcgaacc catcgcgcca
       61 gagggtatcg tgtcacgggt gctgagtcca ccggcacccc cctcaaccat tccggtgtcg
      121 gtgttccttc tattacccga agagcaagac accaacaccg ccataaccac gacgggagtg
      181 aagaccgtgc gcatcaccca acctccagag caaaacgctg accaccttgc acttacgagg
      241 tgcctcaacg gcgtaaatcg ctgccggtct cccaccaaca cacgggtaaa cggcgaccat
      301 ctaaagatga attgagcgga atggagcagg atgtgacggg tgacccttac agaccgcggc
      361 gctgcttcgc gtcgagaacc tccctgacct tgtgcaccag actatcggct gagaacggct
      421 tctgcaggaa tgcctgagtt gagtcgtgca gccccggctc gagcttgtct ccttcggcgt
      481 agcccgacat gtagagcacc tccagatcag gccaccactt gcgcaggcga ccactcagct
      541 ccaggccacc cattccgggc atgacgatat cggtgaggac caggtcgact tttccttcca
      601 gctcttcgac caatgcgagg gcttcttcac cgcgggctgc ccgaatgatc tgatagccct
      661 ggttgccgag tacccgtgca gcgacgctcc ggactgcatc ctcgtcttca acaatgagaa
      721 tggtttcgga tcctcgggta ggctgggcag cctccacggg atgatccact gcatcgtctt
      781 cgtgctcgac ccggggaaaa cagattttga acgtggttcc cttctcgact tcgctgtcga
      841 cccagatgta ccccgcactc tgcgctacga tgccgtagac cgtcgccagc cccagcccag
      901 tgttctgcgt ggccggcttg gtggtgaaga atggctcgaa caggcgcgcc ttgacctcgg
      961 gcgtcatgcc gtgtcctgtg tcgcttacca gcagcatcac ataaggacca ggtggaatgt
     1021 cgatcccgat tttccggtag gcatatccct ggggaagctc gacgtccagc gtttcaatgg
     1081 tgaggcaacc accgccgcgc atcgcatctc gggcattgag cgcaagattc atgatgacct
     1141 gctccatttg cccgtaatcc gcctcgaccc cgccgagtcc ggatgagagc cgagtgacca
     1201 gcgggatgtc ttcgcccagc agcgggcgaa gcatccgctc cataccggag atgacctcgt
     1261 tgagattgag cacgtgccgg gcaaccagct gctgccgccc gaacccgagc agctggcgcg
     1321 tgagatgcat cgctcggtca gccgctttgc gaatttcgtc ggcatcggcc cagcgcggat
     1381 cggtggaatc gagcgtggtc agcaggaaat cgctgaagcc catgatgatc atcatcatgt
     1441 tgttgaagtc gtgagccacg cccccggcca ggcgtcctac cgcttccatc ttctgggctt
     1501 gccggacctg ttcttccgcc cgtcgtcgct cggtgaggtc ctgcacgttg acggcgtagt
     1561 aggtgacctg cccgttctcg tccttgacgg ctgtggcatc gatcaaggcg gggaacaccg
     1621 ttccgttccg gtgcaggcgc tcggtttccc agatctggtg cccccgggca tcgtacagag
     1681 gattcatccg gggaaagtcc gactgaccgg ctgagagctc gatcatcggc ttccctctga
     1741 gctcctccac cgtccaacca tgcatggcgg cgaacgctgg attgacgctt tcgatggtgc
     1801 cgccatcggc gctcacgatc gccacacccc atccggcgtg ctcgaagatc cgggcccagc
     1861 gctggagctc tttcccgacc tcgacccgct gagtgatgtc tcgtccaact ccgacgattc
     1921 cggtgatctc gccgtaggga ccatgcaaag gcgacagcgt ggtctgcatg tggcggagcc
     1981 cgttcttcga gtggagggtc cactcgtagg tgacgctctc tccggccaga gcac
//
LOCUS       DASRPQ010000577         1003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2260673, whole genome shotgun sequence.
ACCESSION   DASRPQ010000577 DASRPQ010000000
VERSION     DASRPQ010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2260673"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          180 a          319 c          322 g          182 t
ORIGIN      
        1 cgtacgtcga cttggacacg ctcatggggc ggtggcctga taccgtgcca ggcccggcag
       61 ggtcaggaat ctgtccccgg gcgggccacg accaaccgtc ggagatacag cccgatgaca
      121 gaatgtggca gcccgaggga ggtacggctg cgcctgatcc ggcttattgc acgcctgcgc
      181 ctgtccggcg ggacgctgga gcgccacgcc gaacgggtct ttctgtacac ggccccctgc
      241 gaattcctat tcgcggatag gaattcctaa tcggcgttcg gcgtgctctt ggcagccatt
      301 acgacgctgg gtcgctgatc tccagcgaac tgcggccggt cctccaaatc acaaataaac
      361 atgttggccg acgcatgatc attcctgttc tcgacgcgcg ctattcgtca tgtgagcaag
      421 acgtcagcgg tgtcggcgag cctgtgggag cgcacagacc agcccgcccg gcacgacatg
      481 gatggcttcc aggcggcccg aggctgccgt ccatatccgg cggatagcgt gccggcgccc
      541 ggcggcccgg ggcatatcgc atggcgacga ctgcgccgct caactccccc ggccgcctca
      601 cccggcaagt cgtgtccgag attgggagcg gaaatgggag cggcgatccg cggccagatg
      661 cggtcagggg cggtgatcgt ggccctaccc aaatgctctg acgtgcggca acgcccgcaa
      721 gcagcggctt tgttcgcctg agtactcagt tcgcatcgag ggggtcaggg gttcaaatcc
      781 cctcagctcc accccggaag ttcccagttc agagccgatt tctggcgcta atttgctctc
      841 ctgcgtgatc gcttcgggag ccaacctggg agccaagtga cagcttctaa agcatggcga
      901 ggcgtggcta cagcgaagac gccatctatt tcgaccacac tgttacccga gggggtagga
      961 cggctgcgga cttctccacc acgagctggc aggcgtcgcg atg
//
LOCUS       DASRPQ010000578         2212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1006995, whole genome shotgun sequence.
ACCESSION   DASRPQ010000578 DASRPQ010000000
VERSION     DASRPQ010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1006995"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..262)
                     /locus_tag="VFD73_06815"
     CDS             complement(26..262)
                     /locus_tag="VFD73_06815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73729.1"
                     /translation="MDERAIRVLEEMRDLVREQGIRQERALALQEASVANQQRAMANQ
                     RGVVRWLLPVFLVSILLILVPYVWRLIVYFLVVR"
     gene            complement(319..>2212)
                     /locus_tag="VFD73_06820"
     CDS             complement(319..>2212)
                     /locus_tag="VFD73_06820"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HZI73730.1"
                     /translation="LHFGAGSVPGDVRQRITSSLDLLGDDDSQSLDPDLMSMLLNDES
                     SGVFYATIARTSGSPLVFVVNPHEVEGVSLLQRVRAYGWTRSSEVICRFPPGGAARPT
                     DVTSERTKQAEIRRYQLDTWLTPSGSGDLSFASNAKLEITSSTSIGPWVAFTLFEKLK
                     VDSARWENGSAAQFFKGKDGELLWVRLDRRLEPGEVRTLALSYHGDLIDRYDDFFFIK
                     SSAEWYPRSLEGRGLATFDLTYHSPKGRLFASVGELMDSSTAGQVTTTHWVAKQPIRN
                     ASFNLGFFKDYRVEEQGIPAVTVLVSEGAHRHLGGLRQKNMKETVGSDVAKSLRFFQY
                     AYGPTAATRMYATEIPYFHGEAFPGLIHLSWWTFQQTDQQGEDEVFRAHEVAHQWWGI
                     GVDFSSYHDQWLSEGFADFSGLWYLQTVRKDNKYFGVLHRWKNEILTNREERAPIWLG
                     YRTASSRDSTGYDVIIYKKGAWVLHMLRIMMLDLKTMNEDRFTDTMRDFYTSYQGKRA
                     STADFRRVAEQHAGMDLGWFFDQWVYGTAVPAYRVAYRTQPAENGKYRVTLRVRQENV
                     PDDFQMYVPVAIDLGNNQTARLRVKVKGPSSDIDLPLLPGQPKAVRFNDLDGVLGEVK
                     MVNWSD"
BASE COUNT          445 a          696 c          652 g          419 t
ORIGIN      
        1 gaaaactgaa ggctcgactg cgccctcagc ggaccaccag aaagtagacg attagcctcc
       61 acacatacgg caccaggatg agcagaatgg agaccaagaa cacgggtagc agccagcgta
      121 ccacaccgcg ctgattggcc atcgcgcgct gctgattggc aacggacgct tcctgcaacg
      181 ctagcgcacg ctcttggcgg attccctgtt cgcgcaccag atcgcgcatt tcctcgagca
      241 ctcgaattgc ccgttcatcc atgaagcacc gtccgataat ggagactgtg tatcgcacaa
      301 attgcaaaag ggtgaggctc aatcactcca attcaccatc tttacctctc ccagcacgcc
      361 atccagatca ttgaatcgaa cggccttagg ctggcccggc agaagcggca agtcgatgtc
      421 tgagctggga cccttgacct tcacccgcaa ccgggcggtc tggttgttgc cgaggtcgat
      481 cgccaccggc acgtacatct ggaagtcatc ggggacgttc tcctgccgaa cccggagcgt
      541 cacccggtac ttcccattct ccgccggctg ggtccggtat gcgacccgat acgccggcac
      601 tgcggtgccg tagacccact gatcaaagaa ccagcccaga tccatgccgg catgctgctc
      661 ggcaacccgc cggaaatcgg cggttgaggc gcgcttgccc tgatagctgg tatagaagtc
      721 ccgcatggtg tcggtaaagc gatcctcatt catggtcttg agatcgagca tcatgatccg
      781 gagcatgtgg agcacccagg cgcccttctt atagatgatg acgtcgtaac ccgtcgagtc
      841 ccgggaggac gcagttcggt agcccagcca gatcggcgcg cgctcctccc tgttggtgag
      901 gatctcgttc ttccagcggt gcaacacgcc gaagtacttg ttgtccttcc ggacagtctg
      961 gagataccag agaccggaaa aatcggcgaa tccttcgctc agccactggt cgtggtagct
     1021 gctgaagtcc acccctatgc cccaccactg atgggcgacc tcgtgggcgc gaaagacctc
     1081 gtcctccccc tgctgatcgg tctgctgaaa ggtccaccac gagagatgaa tcagcccggg
     1141 gaacgcctcg ccatggaaat acggaatctc ggtcgcgtac atccgggtag cagcggtcgg
     1201 accataggcg tactggaaaa accggaggct cttggcgaca tcagacccca ccgtctcctt
     1261 catgttcttc tgcctgaggc cgccgagatg gcggtgggca ccctcggaca cgagcaccgt
     1321 caccgcaggg attccctgtt cctccaccct gtagtccttg aagaagccga ggttgaagga
     1381 ggcgttccga atcggctgct tggcgaccca gtgggtagtc gtgacctgtc cggcggtgct
     1441 cgagtccatc agctcaccca cgctcgcgaa gaggcgtcct ttgggcgagt gataggtgag
     1501 atcgaacgtg gccaggcctc ttccttccag cgaccggggg taccactcgg ccgatgactt
     1561 gataaagaag aaatcgtcgt accggtcgat caggtcgccg tggtaggaaa gcgccagggt
     1621 tcgcacctct cccggctcga gccgccgatc cagccgaacc cagagcagct ctccatcctt
     1681 tcccttgaag aactgcgccg cgctgccgtt ctcccaccgg gccgagtcga ccttaagctt
     1741 ctcgaacaaa gtgaaggcga cccacggacc gatgctggtg ctgctggtga tctcgagctt
     1801 ggcgttcgac gcaaagctca agtccccact tccgctcggc gtgagccagg tgtcgagctg
     1861 gtagcggcgg atttcagcct gcttggtccg ctcgctggtt acgtcggtcg gccgagcggc
     1921 gccgccgggc ggaaaccggc agatcacctc ggagctccgg gtccagccgt aggcgcgaac
     1981 gcgctgcagc aggctcacgc cttctacttc atgagggttg accacgaaga ctaggggtga
     2041 cccactggtg cgtgcgatag tcgcgtagaa aacgccgctg gactcgtcgt tgagcagcat
     2101 gctcatgagg tcgggatcga gggattgact gtcatcatcc cccagaagat cgagactgga
     2161 cgtgatccgc tgcctcacat cgccggggac ggaaccggcg ccgaagtgga gc
//
LOCUS       DASRPQ010000579         1261 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_695401, whole genome shotgun sequence.
ACCESSION   DASRPQ010000579 DASRPQ010000000
VERSION     DASRPQ010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1261
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_695401"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1127)
                     /locus_tag="VFD73_06825"
     CDS             complement(<1..1127)
                     /locus_tag="VFD73_06825"
                     /inference="COORDINATES: protein motif:HMM:NF025079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4158 domain-containing protein"
                     /protein_id="HZI73731.1"
                     /translation="MLHAVHYSRDLIVDRVRFTPADHTQIAQCRGAHNRLGFAYQLGF
                     LRLTGRFPAQQPLELLNDLLVFVAQEVALDPALIQDYAQRRQTVSEHQQLLALYLGFR
                     PFGPAERDALGHFVRDEALRLESTPALVAQAEAFLRDHHILVPASSTLQRVVGEQRAL
                     ARQQLYVRLLACLPSSMPADLDALVQVEEPPYSPLHALKAPPGLPSPRALLRLIAKLD
                     QIQATQVLALDLTWLNPNLQKALAQHVWQTSAHRLRGLPVPQRYTVLVCFLTQTYRDT
                     LDQLVDMYSKVVTATYRRAQHDLDTAVKQHRPMFRDTLQSFHTIGQMLFDDMVASDAI
                     RTMVFEQIPPERLQRQLQDAHQWLTGDTTDVFPLVMKRYSY"
BASE COUNT          248 a          347 c          453 g          213 t
ORIGIN      
        1 aagtaactat agcgtttcat caccagggga aacacgtccg tcgtatcccc cgtcagccac
       61 tggtgcgcgt cctggagttg ccgctgcaag cgctcggggg gaatctgctc gaacaccatg
      121 gtgcggatcg cgtccgacgc caccatgtcg tcgaacagca tctggccaat cgtatggaag
      181 ctctggagag tgtcacgaaa catgggacgg tgctgtttga ccgccgtatc gaggtcgtgc
      241 tgggcgcggc ggtacgtggc ggtcactacc ttgctgtaca tgtcgaccag ttggtcgagg
      301 gtgtcccggt aggtttgggt gaggaaacag accagaaccg tatagcgctg cggcacaggg
      361 agcccgcgca ggcgatgcgc actggtctgc cagacgtgtt gggcaagagc cttttggagg
      421 ttggggttga gccacgtcag atctagggcg agaacctggg ttgcctggat ctggtccagt
      481 ttcgcgatca accgcaggag cgcccgtggc gagggcaggc cgggcggcgc cttgagcgcg
      541 tgcaaggggg agtagggcgg ctcctcaacc tgcacgaggg catcaaggtc cgcgggcatc
      601 gaggagggca ggcaagctaa tagccggaca tagagctgct ggcgggccag ggcgcgctgt
      661 tccccgacca cgcgctggag ggtcgagctg gcgggcacga ggatgtgatg gtcccggagg
      721 aacgcttcgg cctgagcaac gagtgcgggg gtcgattcca gtcgtaacgc ttcatcacgc
      781 acgaagtggc ccagggcgtc ccgctctgcg ggcccaaaag gccgaaagcc cagatacagc
      841 gccaggagtt gttgatgctc cgagacggtc tgccgccgtt gggcatagtc ctggatgagt
      901 gcaggatcga gggcgacctc ctgggcgaca aagaccagca ggtcattgag gagttccagg
      961 ggttgctgcg ccggaaagcg gccggtcagc cgcaggaacc ccagctgata ggcgaagccc
     1021 agccggttat gcgcaccgcg acactgggcg atctgggtgt ggtcggcggg ggtaaaccgc
     1081 acgcggtcga cgatgaggtc gcgggaatag tgcaccgcat ggagcataga cgcatcctcc
     1141 tgaggagagc gctcctgcgc catgggcacg acactcccgt gggcgcagac atgctcacag
     1201 cacaggggtt gcacatgagg gatagtgtga tgctccatac tatagaacaa ggggcgtgac
     1261 c
//
LOCUS       DASRPQ010000580         1825 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_66712, whole genome shotgun sequence.
ACCESSION   DASRPQ010000580 DASRPQ010000000
VERSION     DASRPQ010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1825
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66712"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..670
                     /locus_tag="VFD73_06830"
     CDS             <1..670
                     /locus_tag="VFD73_06830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73732.1"
                     /translation="KDTTETGVEVALAAAKALVMPPETDTTSQRPDSGRGSAHPDTSK
                     GSVPRDSSKATRTADSTSAGGATDSNGFTPRSKEAIPFLQFVIKHGDADAKEKAAVLL
                     YSAATPLLQQQDFQGAEQILRMAVQTANPSGKVYPASNYLLGLALLFQVPQQDPKTEK
                     EKSCDGAKQEQALLAGADSALTAGRSVNPEAVQKNLDIIKKYNPRIASMLKAYCKADK
                     KKKA"
     gene            721..795
                     /locus_tag="VFD73_06835"
     tRNA            721..795
                     /locus_tag="VFD73_06835"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:756..758,aa:Asp,seq:gtc)
     gene            864..1784
                     /gene="rsmH"
                     /locus_tag="VFD73_06840"
     CDS             864..1784
                     /gene="rsmH"
                     /locus_tag="VFD73_06840"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: protein motif:HMM:TIGR00006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HZI73733.1"
                     /translation="MPDQTSTYHVPVLLEAVRAAAHGARRAVDATLGDGGHAAMLLSG
                     GTKVLGIDRDPEAIALARQRLGESGIHYLNAPYASAAALRAIAQFEPDFILLDLGVSS
                     RQLDETSRGFTFRPGAPLGMRMGDSGQTAADLLNQSDLAQLERVFRDYGDERRARRLA
                     SEIVRRRQHQPFAVSDDLVKAIRAVLGPHSGFPDFARLFQAVRIAVNQELEQLSVALP
                     GFRDALKPGGRLSIITYHSGEDRLVKHAFREWASSCICPPGLPVCTCRGRSLGRIEPR
                     RPVLPTEEEIEANPRARSAKLRCFVVHETA"
BASE COUNT          339 a          572 c          572 g          342 t
ORIGIN      
        1 caaggacacc acagagaccg gcgtcgaagt ggctctcgcg gccgccaagg ccctagtcat
       61 gccgccggag actgacacga ctagtcagcg gccggattcc gggcgcggtt cggcccatcc
      121 cgacaccagc aaaggctcgg tcccacgcga ttcatccaag gccactcgca ctgctgattc
      181 tacttcggcg ggaggcgcca ccgactcgaa cgggttcacg ccccggtcca aagaagcgat
      241 cccattcctg cagtttgtga tcaaacacgg ggatgcggat gcgaaggaga aggcggcggt
      301 gctgctctat agcgcggcca ccccactgct gcagcagcag gattttcagg gcgccgagca
      361 aatcctgcgt atggcagtgc aaacggctaa tccgtcgggt aaggtctatc ctgcctccaa
      421 ctacttgctg ggcttggctc tgctgttcca ggtaccgcag caggacccaa aaaccgaaaa
      481 ggagaagtcc tgtgacgggg ccaagcagga gcaggcactc ctggctggcg ctgactcggc
      541 gctcaccgcg ggccgctcgg tcaatccgga ggcggtgcag aaaaacttgg atatcatcaa
      601 gaagtacaat ccccgtattg cctccatgct gaaggcgtac tgcaaggcgg ataagaagaa
      661 gaaggcataa gggagcagtg gctcagagcc tgcagccttg atatattccg cctccgttct
      721 ggggctgtag ctcagcttgg ttagagtgcc gcactgtcac tgcggaggtc gcgggttcga
      781 gccccgtcag ccccgctcgc tttgatgaac gacgcgcacc ccgtcctccg gacggggttt
      841 gtgtttcatc cctcagcccc cctatgccgg atcagacatc gacctaccac gtcccggtgc
      901 tgctggaggc ggtgcgggcg gccgcgcacg gggctcgccg cgcagtggat gccaccctgg
      961 gagatggtgg ccatgccgcc atgctgctga gtggcggcac caaggtgctc gggatcgacc
     1021 gggaccctga ggccatcgcg cttgcccggc agcgtctggg cgagtcggga attcattacc
     1081 tcaacgctcc ctatgcgtca gcagcagcgt tacgcgcgat cgctcagttc gaaccagatt
     1141 tcattctgct cgacctcgga gtgtcttccc ggcaactgga cgagaccagc cgcggtttta
     1201 ccttccgtcc cggtgcgccg ctcgggatga gaatgggcga tagcggacag accgcggccg
     1261 atctgctcaa ccaatcggac ctggctcagc tcgagcgagt gttccgcgat tacggtgatg
     1321 aaaggcgagc ccggcgcctg gcttcggaaa ttgtccgtcg gcggcagcac cagccgttcg
     1381 cggtgagcga cgatctcgtc aaagccattc gggcagtcct gggaccgcac tcgggcttcc
     1441 ccgattttgc ccgtctgttt caggcggtcc gaatcgccgt caaccaggag ctcgaacagt
     1501 taagcgttgc cttgccgggc tttcgtgacg cgctcaagcc cggcggccgg ctgtcgatca
     1561 ttacctatca ttcgggagag gaccggctgg tgaagcacgc ttttcgtgag tgggccagca
     1621 gctgcatctg cccgccaggg cttcccgtct gtacctgcag gggccggtca cttggcagaa
     1681 ttgaaccccg gcggccggtg ctgccgaccg aggaagaaat cgaagccaac ccccgcgccc
     1741 gaagtgccaa gctgcgatgc ttcgtggtcc atgagacagc ttagagggcg ccactgggtg
     1801 tttctctggc tgttgatctt tctgg
//
LOCUS       DASRPQ010000581         3847 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2260791, whole genome shotgun sequence.
ACCESSION   DASRPQ010000581 DASRPQ010000000
VERSION     DASRPQ010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3847)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3847)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3847
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2260791"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..771)
                     /locus_tag="VFD73_06845"
     CDS             complement(<1..771)
                     /locus_tag="VFD73_06845"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HZI73734.1"
                     /translation="MDDPRLREYLQHRMGSVPQDQWSDAQLAVAALLFRPELERDRAN
                     LRAAEAAVVAAGARPAIGVQGDVERAVSQEASPWVVSLAGLFTLELGGKRGARQLRAR
                     AALALAQSRLGETAWNIVQQVRLAAAAAQQGEEATNQLSGELAALEQVRDLERQRYAE
                     AALTSSELARTGAELQAARAALASAQRRHIAARADLARTIGVPPRNIQTLSPRSPMPA
                     GCGLIDSAGQDSLEHLALTSRPEISIALAEYAEAEAGLR"
     gene            complement(912..1817)
                     /gene="xerD"
                     /locus_tag="VFD73_06850"
     CDS             complement(912..1817)
                     /gene="xerD"
                     /locus_tag="VFD73_06850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HZI73735.1"
                     /translation="MSSQIERDFWLEGFRDYLALESGHSANTVQAYLRDLRRLGEFAA
                     SKRIRDPGKLSRPLLREFVFLLKDLGLSAASIRRSVSAIRTYYGFLLGEGKVADDPSD
                     RLESPRRGRVLPVTLSVSEVEALLAAPKLEQPLAWRDRALLELAYGAGLRVSELCGLG
                     LTDLLLTENLVRVFGKGGKERVVPIGRSVIGAVSVYLHTMRPELDRGRSRGKVLLNAR
                     GEPLSRVGAWGVVKLAAKRAGITKRVTPHTLRHSFATHLLEGGADLRAVQEMLGHADL
                     STTQIYTHVDREYLRSVHKQYHPRG"
     gene            complement(1829..2827)
                     /locus_tag="VFD73_06855"
     CDS             complement(1829..2827)
                     /locus_tag="VFD73_06855"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HZI73736.1"
                     /translation="MAAVENVVPPVPSDAAVALGAFLSNRGLTRPLGVFLVTWVANLA
                     GAAAVYLVARRYGRRLFATGVGRRLLAPRSLAIIEREYLRFGVIGIFVSRFLPGIRAV
                     VPPFAGLVNLSPMKTLAPIGLASALWYGGITAVGSLIGSEWDRINHLISSVNRTLGVL
                     TAAVALAALIGYWVARRRRRRERIWHATRDALDPATPSFLADSDVAEGSAGQAAALLV
                     LELAYADTALTEADRELVASHLRERWGLSAEDPATPEPEHERRTRFALYASRLRSRFG
                     QAERLALVERMWTVAFSDGAIGRHEDRLMHLAGELLGLRRGDVMSVRARLQGSLKP"
     gene            complement(2893..3369)
                     /gene="ispF"
                     /locus_tag="VFD73_06860"
     CDS             complement(2893..3369)
                     /gene="ispF"
                     /locus_tag="VFD73_06860"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HZI73737.1"
                     /translation="MIRVGIGYDSHRFVEGRPLVLGGVTIPHPVGLAGHSDADPVAHA
                     LIDAMLGAAAAGDIGRLFPDTDSRWKDADSMVLLRTANELIRARGYALLQADLTLIAE
                     QPRLAPHLDAMAHALTGLLSLPAGSISLKAKTNELMGFVGRGEGIAVLAVATLESR"
     gene            complement(3366..>3847)
                     /locus_tag="VFD73_06865"
     CDS             complement(3366..>3847)
                     /locus_tag="VFD73_06865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="dehypoxanthine futalosine cyclase"
                     /protein_id="HZI73738.1"
                     /translation="AHRQGMKTSVTMMYGLGESDADRIEHLLRVRDLQARTGGFTAFI
                     CWPLQPEGTEMADQPKTDAVAYLRTLAMGRIICDNVPNLQSSWVTMGLKVGQIALRFG
                     ANDFGSLMMEENVVSSAGTTHRATIAEMERCIRDAGYEVRRRRQDYSIIAEPVTAAA"
BASE COUNT          715 a         1306 c         1202 g          624 t
ORIGIN      
        1 tctgagaccg gcctcagctt cggcgtactc cgccagcgca atcgagatct cgggccggct
       61 cgtgagcgcc agatgctcca gcgagtcctg ccctgcggaa tcgatcaagc cacaaccggc
      121 cggcatcgga gagcggggag acagagtctg aatatttcgc ggtgggaccc cgatggttct
      181 ggccaaatcc gcgcgggcgg cgatgtgtcg gcgctgcgcc gaggcaagcg ccgcccgcgc
      241 agcttgcagc tcggccccgg tccgcgccag ctcggagctg gtcagggccg cttcggcgta
      301 gcgctgtcgc tccagatcgc gcacttgttc cagcgccgcg agctcgccgc tgagctggtt
      361 ggttgcctcc tccccctgct gcgctgccgc cgcggcgaga cggacctgct gcacgatgtt
      421 ccatgccgtc tctcccagcc ggctttgggc cagcgccagt gcggcgcgcg cgcgcagctg
      481 ccgtgcgcca cgcttgccgc ccagctcgag ggtaaagaga cccgcgagcg agaccaccca
      541 gggcgaagct tcctgagaca ctgctcgctc cacgtctccc tgcaccccaa tggcgggacg
      601 tgcacctgcc gcgaccaccg ccgcctccgc cgcacgcaag ttcgcccgat cccgctccaa
      661 ctcgggtcga aacagcagcg cagcgacagc gagctgagca tcgctccact ggtcttgggg
      721 aacgctcccc attcgatgct ggaggtactc gcgcagtcgc gggtcatcca acctgcgggc
      781 tcgatattcc gctggccgag ctgctggatc cagcggctcc gcgtgatagc tgacgcagcc
      841 gttcagaaga agcaggcaca gcaaacccgt cggcccattg ccccacgacc gaaccgttcg
      901 acaggctctc attatccgcg aggatggtac tgcttgtgta ccgatcgcag gtactctcga
      961 tccacgtggg tgtaaatctg ggtggttgag aggtcggcgt ggccgagcat ctcctgcacg
     1021 gcgcggaggt cggcccctcc ctccagcagg tgcgttgcaa aactatgccg cagggtgtgg
     1081 ggcgtgaccc gcttggtgat tccggcgcgc tttgccgcca gctttaccac accccaggct
     1141 cccacccgag acagcggttc accgcgggca ttcagcagga ccttgccacg gctcctgccc
     1201 cgatccagct caggacgcat agtatgcagg tagacggaca ccgcgccaat aacgctcctg
     1261 ccgatcggca ccacccgctc ctttccgcct ttgccgaaga cgcggaccag attctcggtc
     1321 agcaaaagat cggtgagccc caatccgcag agctcggaga ctcggagtcc ggcgccatag
     1381 gcgagctcca gcagcgcgcg atcacgccag gcaagcggct gctccaattt cggtgcagcc
     1441 agcagggcct cgacctcgct gacgctcagg gttaccggaa gtactcttcc ccgccgaggg
     1501 ctctccaatc tgtcgctggg atcgtcggcg accttccctt caccgaggag aaaaccatag
     1561 tacgtgcgaa tcgcggagac actccgacga atcgacgccg cgctcaatcc caggtccttc
     1621 agtaagaaga cgaactcccg caggagaggg cggctgagct tgcccggatc ccggattcgc
     1681 ttggatgcgg cgaattcgcc gaggcgcctg aggtcgcgaa gatatgcctg caccgtgttg
     1741 gcgctgtggc ccgactccag cgccagataa tcgcggaacc cttcaagcca gaaatcgcgc
     1801 tcgatctgcg agctcaccgt tgtcgcactc atggcttgag cgacccctga agccgcgctc
     1861 gcacgctcat cacatctcca cgccggagac ccaggagctc tcccgccagg tgcatcaggc
     1921 ggtcttcatg gcgcccgatc gcgccatcgc tgaaggctac ggtccacatt cgctcgacga
     1981 gagcgaggcg ctcggcctgg ccgaatctgc tcctcaggcg ggatgcgtaa agggcaaacc
     2041 gggtccgccg ttcgtgttcc ggctccggtg tcgcgggatc ctcggcgctc aacccccacc
     2101 gttcgcggag gtgggaagcc accagttcac ggtccgcctc ggtcagcgct gtatctgcgt
     2161 aggccaactc caaaaccaga agcgccgccg cctggccggc cgagccctcc gcgacatccg
     2221 agtcggcgag aaacgagggt gtcgccggat cgagtgcgtc ccgggtagca tgccagatcc
     2281 gctcccggcg cctgcgtcgg cgggccaccc aatacccaat gagcgcggcc aaggccacgg
     2341 cggctgtgag tactccgagc gttcggttta cactggagat gaggtggttg atccgatccc
     2401 attccgatcc gatcaaggag cccaccgcgg tgattccgcc ataccacagc gccgacgcca
     2461 gaccgatggg ggcaagcgtc ttcattggac tcagattcac cagtccggca aagggaggaa
     2521 ccaccgcccg aatgccagga aggaagcgac tgacgaagat cccgattacc ccgaaccgga
     2581 ggtattcccg ttcaatgatc gccaacgaac ggggagcgag cagccggcgg ccgaccccag
     2641 tcgcaaacag ccggcggcca taccggcgcg caaccagata cacggccgcg gcaccggcaa
     2701 gattggcaac ccaggtgacc aggaatacgc ccagcggtcg ggtgagtccg cgattggaga
     2761 ggaaggcgcc caaggcaact gcggcgtcgg acggcactgg gggcacgacg ttctcgacgg
     2821 cagccaacag tgcaaggacg gcatagattg cgactggagg aagctgcgaa agccagttga
     2881 cgagcgactc gatcagcgcg actccaacgt agccaccgca agtaccgcaa tgccctcgcc
     2941 ccgcccgacg aaccccatca gttcgttggt ctttgccttg agactgatgc tgccggccgg
     3001 aaggctcagc aatccggtca acgcatgcgc catggcatcg aggtgtggtg ccagccgggg
     3061 ttgctcggcg atgagggtga ggtctgcttg gagcaacgcg tagccccgcg cccgaatcag
     3121 ctcattcgcc gtccgcagga gcaccatcga atcggcgtcc ttccagcgag agtccgtgtc
     3181 gggaaagagg cgaccgatgt ccccagcagc cgcggcaccg agcatggcat caatcagggc
     3241 gtgagcgacg gggtcggcat ccgagtggcc ggcaagcccg accggatgag gaatggtgac
     3301 gccaccgagc accagcggac gaccctcgac gaagcgatgc gagtcgtagc cgatgcccac
     3361 tcgaatcatg ctgcggcggt caccggctcg gctatgatgg aatagtcctg ccgccggcga
     3421 cggacctcgt agccagcatc tcggatgcaa cgctccattt cggcgatggt ggcccggtgg
     3481 gtagtgccgg cggaggaaac gacgttctct tccatcatca ggctgccgaa atcattggcc
     3541 ccgaagcgga gcgcaatctg gcctaccttg aggcccatcg tgacccacga cgactgcaag
     3601 ttgggcacgt tgtcgcaaat gatgcggccc attgcaagtg ttcgcaggta ggctacggca
     3661 tcggtcttcg gctggtcggc catctcggtc ccttccggct ggagcggcca gcagatgaag
     3721 gcggtaaatc caccagtccg ggcctgcagg tcgcgcactc tgagcaggtg ctcgatccgg
     3781 tccgcatccg actcgcccag tccatacatc atcgtcaccg acgtcttcat cccttgccgg
     3841 tgggcct
//
LOCUS       DASRPQ010000582         1997 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1321324, whole genome shotgun sequence.
ACCESSION   DASRPQ010000582 DASRPQ010000000
VERSION     DASRPQ010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1321324"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(98..1042)
                     /locus_tag="VFD73_06870"
     CDS             complement(98..1042)
                     /locus_tag="VFD73_06870"
                     /inference="COORDINATES: protein motif:HMM:NF039315.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5996 family protein"
                     /protein_id="HZI73739.1"
                     /translation="MTATLAITERRGQGTWPSLQLSEWKDTLDTVHRWVQMVGKTRLA
                     LAPPLNHWWHVTLYLTARGLTTSPMPYGVRSFEVDLDFLDHNLLIRTNEGATRALALV
                     PRTVADFYREYTGMLDSLGFRIKLRPIPSELEDTTPFDQDRRHAAYDPDYMSRCWKIL
                     SRTTRVLEQFRGRFLGKCSPVHFFWGAFDLACTRFSGRSAPPHPGGVPNLPDWAVREA
                     YSHECMSAGWWPGGGPVPEPSFYAYSYPEPAGYAEAAVQPEAAYYHPELREFILPYEA
                     VRSAPNPERILLQFFQTTYEAGAILGNWDRKSLERPQE"
     gene            complement(1121..1615)
                     /locus_tag="VFD73_06875"
     CDS             complement(1121..1615)
                     /locus_tag="VFD73_06875"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI73740.1"
                     /translation="MQFPSPGGFRLAHIFQRNVATTAIPPKRQPSARSTMELNDHSSS
                     AAGTILIVDDEELLRGLLSRLLADAGLMVAEAPNGRVALDVAESLGEALRLIVTDIHM
                     PVMSGPEFVREFRPRHPDIPVLYMTGRSTSAPLDDYGDPLLHKPFTGEAFLALVQGLL
                     YQFR"
BASE COUNT          398 a          592 c          658 g          349 t
ORIGIN      
        1 ccaccagccc ccggtcttca ggcactcttc gcacccttga ggtgtgttcg gctctaccga
       61 ccggacctgg tcgagatggg aacagttcat aactcactta ctcctgaggc cgttcgagtg
      121 acttgcggtc ccaattcccc aaaatcgcgc cggcttcgta cgtagtctgg aagaactgca
      181 gcaggatccg ctcaggattg ggggccgaac ggactgcttc gtagggcaga atgaactccc
      241 ggagctcagg gtggtagtat gccgcttccg gctgaacggc agcttcagca tacccggctg
      301 gctccgggta gctgtacgca tagaaactcg gctccggaac aggtccgccg ccgggccacc
      361 agcccgcgct catgcactcg tgcgaatagg cctcccgcac cgcccagtcg ggcaggttgg
      421 gaacaccacc gggatggggt ggcgcggagc ggccggagaa tcgggtgcag gccaggtcga
      481 atgcacccca gaagaaatga accgggctgc atttcccgag gaaccgtccc cggaactgct
      541 cgagcacccg ggtggtccgg gagagaattt tccagcaccg gctcatgtag tccgggtcgt
      601 aggcggcgtg ccggcggtcc tgatcgaaag gagtggtgtc ctccagttcg gaaggaatgg
      661 gccgcagctt gatcctgaaa ccgagtgaat ccagcatacc ggtgtattcc cggtagaaat
      721 cggcgacggt tctcggcacc agggcgagag cccgggtcgc gccctcgttg gtccggatca
      781 gcaggttgtg gtcgaggaaa tcgagatcga cctcgaatga ccggactccg tatggcatgg
      841 gtgacgtggt caggccccgc gcggtcagat acaaggtgac gtgccaccag tggttgagcg
      901 ggggggcgag cgccagccgg gtcttcccta ccatctgcac ccagcggtgg accgtgtcca
      961 gcgtgtcctt ccactcggag agctgaaggc tgggccaggt gccctgccct cgccgttcgg
     1021 tgatggcgag cgtggcggtc atcgctacct ctcgagaggg tcagcggaaa gcggagctat
     1081 cgatatataa ggtagcctgg cccaacgagg cgatgagtcg ctagcgaaac tgataaagaa
     1141 gcccctgcac cagcgcgaga aaggcttcgc cggtgaacgg cttatgcagc agcggatccc
     1201 catagtcgtc taatggggcg ctggtgcttc ggccggtcat gtagagcacg ggaatgtcgg
     1261 gatggcgagg acggaattct cgaacgaact cggggccact catgaccggc atgtggatgt
     1321 cggtgacaat cagccggagc gcttcgccca aactctccgc cacatccagc gccactcggc
     1381 cattcggggc ctcggccacc atcaatcccg catccgccag gagccgcgag agcagccccc
     1441 gcagcaactc ctcgtcgtct acgatgagaa tggtaccggc ggcactgctc gaatgatcgt
     1501 tcagttccat ggtcgatcgg gctgaaggct gccgcttcgg cggaatcgcc gtggtcgcga
     1561 cgtttcgctg gaaaatgtgt gccagccgaa agccccccgg agatgggaac tgcacctcct
     1621 gggagaggcg acttggccct ttaggtgacg aattggcgcg gacacagcgt tccagatcaa
     1681 gctcgggccc cgaccgaacg cggtgaatgg aaaggtgacc cagccggttc gacaaccgac
     1741 tcggccgact cggtacccag ccgtcaccga accgatgcgt ctccggacga gctgaatacg
     1801 aactcggatc tcacgattgg agcggacgag agcatgggcc cgctgccgtc ctcaggtcga
     1861 ttcggaaggt ttggtggtcg accgggaatg tttggacatc aaccgcacaa ccgggtgcgg
     1921 acgaaagaac cggaaaaatc gagggagctg cggcgtagcg agaaggtcgg tccggtgcgg
     1981 ctgggtgatt tgtagct
//
LOCUS       DASRPQ010000583         2240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2260869, whole genome shotgun sequence.
ACCESSION   DASRPQ010000583 DASRPQ010000000
VERSION     DASRPQ010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2240
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2260869"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..470)
                     /locus_tag="VFD73_06880"
     CDS             complement(<1..470)
                     /locus_tag="VFD73_06880"
                     /inference="COORDINATES: protein motif:HMM:NF040425.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6444 domain-containing protein"
                     /protein_id="HZI73741.1"
                     /translation="MPDTPVPDDAAGLRAANARLRELLAERDAEIELLREAVARLQSQ
                     VADLAAQVKANSRNSSKPPSSDGLAKPSPKSLRGKSGRKPGRPKGQPGATMQFSEHPD
                     KTVRHRPARCGGCGKSLKGAPSRTPRAYGASSRCPPVAARSSTARRDIRRQVILR"
     gene            633..1043
                     /locus_tag="VFD73_06885"
     CDS             633..1043
                     /locus_tag="VFD73_06885"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZI73742.1"
                     /translation="MADIAGYVADPGEGVPGSGPDVKATAAVTGGALTVMESVVGQGP
                     PRHVHTYEDECFYVLKGTVTGTCGDEAFEAGPGSFVFLPRGLTHTFRAADGEARVLLI
                     AVPGGIEHYFGEINNAASVAEQERIGARYGIRVV"
BASE COUNT          404 a          784 c          673 g          379 t
ORIGIN      
        1 cgcagtatta cctgacgccg gatgtcacgc cgtgcggtgc tggacctggc cgccacgggc
       61 gggcaccggc tcgatgcgcc gtacgcccgg ggggttcttg agggcgcgcc tttcagggac
      121 ttcccgcagc cgccgcaccg cgcaggccgg tgccgcaccg tcttgtccgg atgctcgctg
      181 aactgcatcg tcgcccccgg ctgccccttc ggccggcccg gctttcggcc ggacttcccg
      241 cgcagcgact tcggcgacgg cttggccagc ccgtccgacg acggcggctt cgaggagttc
      301 cgcgagttcg ccttcacctg cgcggccagg tccgcgacct gcgactgcag cctggccacc
      361 gcctcgcgca gcagctcgat ctccgcgtcc cgctccgcca gcagctcccg cagccgcgca
      421 ttcgcagcac gaagccccgc agcatcatcc ggcacgggcg tatctggcac gcgcgcacta
      481 caccacggcc acgcgcctcc cgcaaataga cggatagcaa accagggacg agacgcctgc
      541 ctggttgccc agcgtcaccc gcctcccgcg ccactgccct gccggcctgg gccagtgccc
      601 cgcgtctgca ggctgctgtc ataatctggt tcatggcgga catcgcggga tacgttgccg
      661 acccgggtga gggggtgccc gggagcggcc cggatgtgaa ggccacggcg gcggtcaccg
      721 gcggcgcgct gaccgtgatg gagtcggtcg tcgggcaagg accgccgcgt cacgtccaca
      781 cctacgaaga tgagtgcttc tacgtgctta agggcacggt aacggggacg tgcggcgacg
      841 aggcgttcga ggcgggcccg ggcagcttcg tcttcctgcc gcgcgggctc acccatacct
      901 tccgcgccgc tgacggcgag gccagggtgc tgctgatcgc cgtccccggc ggcatcgagc
      961 actatttcgg cgagatcaac aacgccgcca gtgttgcgga gcaagagcgg atcggcgcca
     1021 ggtacggaat ccgggtcgtc tgagcagccc ccgcgcccca ccagcgccca gcactacaag
     1081 ggctacagat gctcgcgacc tatccagtta ccttccgtaa ctcgtcttac caggccagct
     1141 cgcagtgcac cctccacggt aatacctaga attcccgcaa tagccaatgc ctcactgagg
     1201 ctaaggaatg ttcctgccca atcccaactt ctcagagccg gcagctgatg aaacagaatt
     1261 atgccagcga ttcccactag ggcagttccc actacaagca accatttgag tacggtcgac
     1321 ttgcgcccct ccatggcatc ctctttgctg tcgtcgttat tcgtctagtg cctgttgtgc
     1381 caacaaccgc tgaatcgatt agacgcggag gctacatgtt caagtaactg gcacaaggag
     1441 atgataccaa cagagtggat tttttggtgt ccgtgtcccg aagactcgtt ccggccgaac
     1501 cgtatcatag ctctaagggg cctctacgat cctcccgact actacgcggc cagtttacac
     1561 aaaggaggtc gctgcttcat ggctacaggt caagcggtag gcccactcac ccaatgtacg
     1621 gtagcgactc gctcgatcca gccctgagcg ctccaaatac gacggttcca ggtgctgctc
     1681 gacgtggtcg gcgcccgacg agcccgtagg ccgcgagtgg ggttgagcaa atcgagggcc
     1741 aagaccgcgg cctgtctgta gccaccgtgt gtagcaacca tcccggtcaa tcccgatcgg
     1801 cagcgagtca agaagcaaaa taaatcccac gtcacgcatt atcccgaacg cattggcctg
     1861 atcttctaag cagatgatcc tgctacccag cgcgacccca gccgaggcga ccaacgaggc
     1921 ttaccctggc gcatcttcga cgccctgacc gtcgagcaac cgccagcacg acctccagca
     1981 cttggtccag cctgagacga tccgaccagt cgcgctccca ggtcgccttg ccaggcacag
     2041 cacaactggg aacaagacac ccagaaacgc gctgcacctg cgctgcgtgt cgggtagccc
     2101 cggagcgtta ccgccccggg gccccctaag aaccggccgt gcccgtttcc gggcaaccgg
     2161 ctcaagcaag ccctgctggc tcgcgggcgt cagcgggcag gggtgctggg ctggtgctgt
     2221 cgcgtcggcg gcagtaggcg
//
LOCUS       DASRPQ010000584         4650 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1635233, whole genome shotgun sequence.
ACCESSION   DASRPQ010000584 DASRPQ010000000
VERSION     DASRPQ010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4650
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1635233"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..692)
                     /locus_tag="VFD73_06890"
     CDS             complement(<1..692)
                     /locus_tag="VFD73_06890"
                     /inference="COORDINATES: protein motif:HMM:NF013199.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73743.1"
                     /translation="MNVGKEYWPGPALEVYVLSWPPDLSAEQHGVNVSTESPFSLRSV
                     MNRFAQKVVSGGLAAGLSVAVAVSAGAQQARSGAWTLNAPEGEWHMTGRDYSLQRFSP
                     LKQITTSNVAELRPVWSFSTGTLRGHEGNPLVVGNVMYVHTSFPNIVYALDLSKPGAP
                     QIWKYVPNQSPDAIPIACCDLVNRGTAYHPSGKIFIQLLQGELLALDAKTGKELWKAK
                     NADYKQGSTMTNA"
     gene            complement(1174..2148)
                     /locus_tag="VFD73_06895"
     CDS             complement(1174..2148)
                     /locus_tag="VFD73_06895"
                     /inference="COORDINATES: protein motif:HMM:TIGR00144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ribofuranosylaminobenzene 5'-phosphate
                     synthase family protein"
                     /protein_id="HZI73744.1"
                     /translation="MSNPDRIVVEAPARLHFGVLDLGGRLGRCFGGLGAAIPHPSLRI
                     EVSASDRLSGAGPECERAVEFARRFLAYHRLARGAHVVVRQAIPAHSGLGSGTQLALA
                     VGRALSEIYGISGDVLQLAQATGRGKRSAIGTWAFALGGFIVEGGRRPESESIAPLLA
                     GFAIPNEWRYVLAVPSGGRGLSGAAETRAFEELPHPSDREVERVSHLVLMQLLPALVE
                     VDLPSFGAALSEVQRITGGWFATQQGGIFAPGPTEELITAMAKWGAAGVGQSSWGPAA
                     YGLVEGADAGAALARRVEALLGGAGAVFQGGFASEGAQMSAAPNRAEN"
     gene            complement(2132..2677)
                     /locus_tag="VFD73_06900"
     CDS             complement(2132..2677)
                     /locus_tag="VFD73_06900"
                     /inference="COORDINATES: protein motif:HMM:NF016199.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF447 domain-containing protein"
                     /protein_id="HZI73745.1"
                     /translation="MIIETIVTTRNAGGEINFAPMGVEWGEETIVLKPFLETTTFRNL
                     STTRVAVVNLTDDAMLFAQGAISSPQFPAVPAQVVAGVVLEAACSWRELEVIAIDATP
                     PRSRIDTRVVHRGIRREFIGFNRARHAVLEAAILATRTHLLPAEQIREEYARLQVVVD
                     KTAGPREREAMDLLTRYVQSR"
     gene            complement(2674..3348)
                     /locus_tag="VFD73_06905"
     CDS             complement(2674..3348)
                     /locus_tag="VFD73_06905"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HZI73746.1"
                     /translation="MILLIDNYDSFVYNLSRYVKELGEVPRVVRHDAISVDEIADLNP
                     SHIIISPGPCSPNEAGISTDVVRALGDQIPLLGVCLGHQCIGQAYGGQIVRARAPMHG
                     KTSRIHHSGQGIFSHLPNPFVATRYHSLVIAPESLPDCLTVTARTEDGQIMAVQHVTH
                     PVYGVQFHPESVLTEHGYRLIDQFLHGVTASPRAVPHAADGALLSYAPQASTLASAPP
                     PADLVR"
     gene            complement(3405..>4650)
                     /gene="pabB"
                     /locus_tag="VFD73_06910"
     CDS             complement(3405..>4650)
                     /gene="pabB"
                     /locus_tag="VFD73_06910"
                     /EC_number="2.6.1.85"
                     /inference="COORDINATES: protein motif:HMM:TIGR00553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008153 - para-aminobenzoic acid
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component I"
                     /protein_id="HZI73747.1"
                     /translation="EPLRAVPGLPPFQGGLAGYIGYDWGAVLERLPQNRYDDLVIPDL
                     VLGLYDWVIAWDHRIGTGWLISTGLPETGPARERQARSRLQLVRERLSASGNSRLRPA
                     AQPRIAVGPLPAEIPPTYPVSGISGEKEIGLRSTFTHDGYVKAVNRVREYIISGDIFQ
                     ANISQRFESPLLQQPFQLYRRLRRRNPAPFAAYLDFGELAILSASPERFLRLEEPTRL
                     VETRPIKGTRPRGLGPMHDAALGRALAESEKDRAENVMIVDLLRNDLSRVCRAGTVRV
                     PELFAIEQHPTVHHLVSTVLGELESGLDGTDLLRATFPGGSITGAPKVRAMEIIAELE
                     PTKRGVYCGTIGYLSVTGAMDTSIVIRTYSALRGQVYFQAGGGIVADSDPELEYRETL
                     DKARGLMETLVESRVASRESRT"
BASE COUNT          882 a         1472 c         1471 g          825 t
ORIGIN      
        1 gcgttggtca tggtgctgcc ctgcttgtag tcggcattct tggccttcca cagctctttg
       61 ccggtcttgg catcgagcgc gagcagctca ccctgcagca gctggatgaa gatcttgccg
      121 ctggggtgat aggcggtgcc ccggttgacc aggtcgcagc aggcgattgg aatcgcgtca
      181 ggcgactggt tcggcacgta cttccagatc tgcggcgcac ccggcttgga gagatcgagc
      241 gcgtacacga tgttggggaa ggacgtgtgc acgtacatga cgttcccgac cacgagcgga
      301 ttgccctcgt gcccccgaag cgtcccggtc gagaacgacc agacgggccg gagctcggcc
      361 acattcgagg tcgtgatctg cttgagcggg ctgaaccgct gcaagctgta atcacggccc
      421 gtcatgtgcc actcgccctc gggcgcgttc agggtccatg cccccgaccg tgcctgttgg
      481 gcgccggccg acaccgctac ggcgaccgac agccccgcag cgagtccgcc agacactacc
      541 ttctgcgcaa aacggttcat aactgacctc agggaaaagg gtgattctgt actgacgttc
      601 actccgtgct gttctgcgga caggtcgggc ggccaactga gcacgtacac ctcgagagcc
      661 ggcccgggcc agtactcctt gccgacgttc aaacgctcat cctatcggag gcccgcgctc
      721 gactgtcggg agcatccacc ggcggagcgt gctcgtcgtc cacgaacatc tacgtctgac
      781 gaagttccgc tggatggatt tgagagcgcg atcgggaaaa tggggactga tcgcgcaagt
      841 ctgaaacaag aaccgtggga gctgctgtaa ggaagaggaa ttggctggct tggaaacacg
      901 ggggaacgct gcatgggctc gccatggcac gttcgaccag tgactccgcg cgctgccgac
      961 gcgaagcggc atgggcatcg aacatccaat agagtgaaat tcagacaagc ccattaggtc
     1021 cccagggcgc cgctgaaccc tttgtgtgcc agtttatcct gcagttggga aggcagcatt
     1081 gcgtcgcatc attatgccgc cgcagcgttt ccaagtcacc tatgacggga ggcttagagg
     1141 ggtcagtata cagccggtaa aatgaactgt caatcagttc tcggcccgat tgggagctgc
     1201 cgacatctgg gccccttccg acgcaaaacc accttgaaag acggctcccg cgcccccgag
     1261 gagcgcctcg acccggcggg ccagtgcggc tcccgcgtca gcgccctcga ccaagccgta
     1321 cgccgcgggc ccccacgagc tctggccgac gccggcagct ccccacttgg ccatagccgt
     1381 gatcagctcc tcagtcgggc cgggggcgaa gatgccgccc tgttgagtcg cgaaccaccc
     1441 tccggtgatc cgctgcacct cggagagcgc tgccccgaag ctgggaagat ctacttcgac
     1501 caacgccggc aggagctgca tgagcaccag gtgggagacc cgctccacct cgcgatccga
     1561 cgggtgaggc agctcttcga atgcgcgggt ctcggcggca ccactcaagc cccgtccccc
     1621 agaggggacg gccagtacgt aacgccactc gttcggtata gcgaaacccg ccagaagcgg
     1681 cgcgatgctc tccgactcgg gccggcggcc gccttctacg atgaagccgc ccagggcaaa
     1741 ggcccaggtg ccaatggcgg aacgcttgcc tcgacccgtc gcttgagcca actggagcac
     1801 gtctccggat attccgtaga tctctgacaa cgctctcccg accgcaagcg ccagctgagt
     1861 tccggatccc agccccgagt gggcggggat tgcttgacgc accacgacgt gggcaccccg
     1921 cgcaagacgg tgataagcca gaaagcgtcg agcaaactcc actgcccgct cgcactccgg
     1981 tcccgctccg ctcaagcggt ctgaagcact cacctcaatc cggagagaag gatgggggat
     2041 cgctgctccc aatcccccaa agcagcggcc cagtcgcccg ccaaggtcca gcaccccgaa
     2101 gtggagccga gccggcgcct cgacgacgat cctatctgga ttggacatat cgggtcagca
     2161 agtccattgc ttctcgctcc cgcggccctg ccgtcttgtc caccacgacc tgaagccggg
     2221 cgtactcctc ccgaatctgc tcggctggca gcagatgcgt tcgggtagcc agaatggccg
     2281 cctccagcac ggcatggcgg gcccgattga agccgatgaa ttcccgccgt atgccgcgat
     2341 gcacaacgcg tgtgtcgatc cgcgaacgcg gtggggtggc atcgatagcg atgacctcga
     2401 gctcccgcca ggagcaggct gcttccagca cgactccggc gactacctgg gccggcaccg
     2461 ccggaaactg ggggctggag atcgcgccct gggcaaacaa catcgcgtcg tcagtgagat
     2521 tcacgacggc tacgcgggtg gtgctgaggt ttcgaaatgt tgtagtctcc aggaacggct
     2581 tcagaacgat tgtctcttcg ccccactcca ctcccatcgg ggcgaaattg atctcgcccc
     2641 cggcattccg ggtggtgaca atggtctcaa tgatcaccgg accaggtcgg cgggaggagg
     2701 agctgatgcc agcgtgctgg cctggggagc ataggacagg agggctccgt cagcggcgtg
     2761 ggggaccgcg cgcggactgg ccgtcacgcc gtgcaggaac tgatcgatca ggcgatagcc
     2821 gtgttcggtg agcaccgatt ccgggtggaa ctggacacca tacaccgggt gtgtcacatg
     2881 ttgaacagcc atgatctgac cgtcctcggt tctggcggtg acggtcaggc aatcgggcaa
     2941 cgactccggg gcgatcacca gggagtggta ccgagtcgcg acgaaaggat tcggcaggtg
     3001 ggagaagatc ccttggcccg agtggtgaat acgggacgtc ttcccatgca ttggggccct
     3061 ggcccgcacg atttgtcctc cgtatgcctg tccgatacac tggtgaccca gacacacgcc
     3121 tagaagaggg atctggtcgc ccagggcgcg gaccacgtcg gtcgagattc ccgcctcatt
     3181 gggagagcat ggtccgggcg agatgatgat gtgtgacggg ttgagatccg cgatctcgtc
     3241 cacagagatg gcatcgtgtc gcaccacccg cggcacttca cccagctctt tgacgtagcg
     3301 ggagaggttg tagacgaagg agtcgtagtt atcgatgagc aggatcattg gctgcagtca
     3361 cgagtcgaga gttacgagtc acgaacgcat cacagctcga tctttcaagt ccgcgactcg
     3421 cgactcgcga ctcgcgactc gaccaacgtc tccatcaggc ctctcgcctt atcgagcgtc
     3481 tcccggtatt ccaactccgg atcggagtcc gccacgatcc cgccgcccgc ctgaaagtat
     3541 acctgccctc gaagcgccga ataggtgcga atgacgatgc tcgtgtccat tgccccagtc
     3601 acgctcagat agccgatggt gccgcaatac acgccgcgtt tggtgggctc cagctcggcg
     3661 atgatctcca tggctctgac tttgggggcg ccggtgatag agcctccggg aaaagtggcc
     3721 cgcaggagat cggtgccatc gaggccgctc tccagctcgc ccaggacggt cgagaccaga
     3781 tgatggaccg tggggtgctg ttcgatcgca aacagttcgg ggactcgaac cgttcccgcg
     3841 cggcacaccc gggagagatc gttccgaagc agatccacga tcatcacgtt ttctgcgcgg
     3901 tccttctcgc tttcagcgag cgccctgcct aatgcggcgt cgtgcatggg accgaggccc
     3961 cgcgggcggg ttcctttgat gggccgagtc tcgaccaaac gggtgggttc ctccaaccga
     4021 aggaatcgct ccggcgacgc gctgagaatc gccagctcgc cgaaatcgag atacgcggca
     4081 aagggggctg ggttgcgtcg gcgcagccgc cgatagagct ggaagggctg ctgaaggagg
     4141 gggctctcaa atcgctgcga gatgttcgcc tgaaagatgt cgccgctgat gatgtactcc
     4201 cgaacgcggt tgaccgcctt cacgtatccg tcgtgagtaa aggtggaccg aagcccgatc
     4261 tccttttcgc cggagattcc cgagaccgga taggtaggag ggatctctgc tggcagcgga
     4321 ccaacggcga ttctgggctg ggcagctgga cgcagtcggc tgttgccgct ggcgctcagt
     4381 ctctcccgta ccagctgcaa gcgcgaacgc gcttggcgct ctcgcgccgg cccggtttcc
     4441 ggcaagccag tggaaatcag ccatcccgtg ccgatccgat gatcccacgc gatgacccag
     4501 tcgtagagtc cgagcaccaa gtcggggatg acaagatcgt cgtaccggtt ttgaggcagt
     4561 cgttccagca cggcgcccca gtcgtagccg atgtatcccg cgagcccccc ctgaaatggt
     4621 gggaggccgg gtaccgcgcg gagcggctcc
//
LOCUS       DASRPQ010000585         1248 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2587755, whole genome shotgun sequence.
ACCESSION   DASRPQ010000585 DASRPQ010000000
VERSION     DASRPQ010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1248
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2587755"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            317..>1248
                     /locus_tag="VFD73_06915"
     CDS             317..>1248
                     /locus_tag="VFD73_06915"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI73748.1"
                     /translation="MFSRLIRQASRRAPHLMAKQATKALKTTAKVTRAAVRQGTKAVQ
                     HTSKAVRQTRNAVQALEAEQVHRPRPLGRFVEVDGVRVHYIARGKGRPVVLVHGNGTM
                     AEDFIICGLVDQLATRYRVIAIDRPGFGHTDRPRWRVWTASAQAHLLHRVLENLNIER
                     PVIVGHSWGTLVALALLVGGWRELRGLVLLSGYYYPTRRADVAATAPLAIPGLGDLAR
                     SMVPQAVGHLFAPQVFRHVFWPQPVPARFRARFPVEIAIDPLQQRASAEDTATLNAAA
                     ALLQPYYSGLRVPVAILTGDVDAIVDAQDHSCWL"
BASE COUNT          193 a          434 c          394 g          227 t
ORIGIN      
        1 caagagcgca tgctgagcga actggaccgg ttctcgccgg aggcgctcgt caaccaatgg
       61 ctggccacct tgccccagca ggtcgagcgc atgcaggacc tgttcgccca gatgatgctg
      121 gcccgaactg ggcaagagcg gcgttgatct ccacggctcg ggtcccctga cgcaggggga
      181 gcaggttgga cgcggcgcgc gcaagcggca tgatcgccct ccgattcgcc actggcgtgc
      241 ttggtcccga tccgtttcag gcttcacgcg tcagatctct gcctccctgg ctgatccgcc
      301 tccctaagga gccctcgtgt tctcacgcct gatccggcaa gcctcgcggc gtgcgcccca
      361 tctcatggcc aaacaggcca ccaaggccct gaagacgact gccaaggtca cccgcgccgc
      421 tgtccggcag gggaccaaag cggtccaaca caccagcaaa gctgtccgac agacccgcaa
      481 cgcggtgcag gcccttgagg ccgagcaggt ccatcggcca cggcccctgg gccgattcgt
      541 cgaggtggac ggggtgcggg tgcactacat cgcccggggc aaaggccgtc ccgtggttct
      601 ggtccacggc aacgggacca tggccgagga cttcataatc tgcggcctcg tggaccagct
      661 tgcgacacgc tatcgggtta tcgccataga ccgacccggc tttggccaca ccgaccgacc
      721 gcgctggcgc gtgtggactg cctcagccca ggcgcacctt ctccatcgcg tgctggagaa
      781 cctgaacatc gagcggcctg tgatcgtggg ccactcctgg ggcacgctcg tcgcgctcgc
      841 actgcttgtc ggaggctggc gtgagttgcg cgggctcgtg cttctgtccg gctactacta
      901 cccgacccgg cgtgcggacg tggccgcgac agccccactt gcgatccccg gcttgggtga
      961 cctcgcccgt tccatggtgc cccaggctgt tggccatctg ttcgcgccac aggtgttccg
     1021 gcacgtgttc tggccccaac ctgtgcctgc tcggttcagg gcgcggtttc cggttgagat
     1081 cgcgattgat cctctccagc agcgggccag tgcggaggac acggcaaccc tgaacgcagc
     1141 tgccgccctg ctccagccgt actattctgg gctgcgggtt ccggttgcca tcctcacggg
     1201 cgacgtagac gccattgttg atgcccagga tcactcctgt tggctgca
//
LOCUS       DASRPQ010000586         3852 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1635575, whole genome shotgun sequence.
ACCESSION   DASRPQ010000586 DASRPQ010000000
VERSION     DASRPQ010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3852
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1635575"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..954)
                     /locus_tag="VFD73_06920"
     CDS             complement(<1..954)
                     /locus_tag="VFD73_06920"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HZI73749.1"
                     /translation="MISAGAGLVSILSYTHSIKSKMDGIDSVASEGLAHASVRWIGIS
                     PTVDTATAIGDTIQLAVTATDARGNALLGAPTVWNSSDTMVATVDSAGTVIARGGGGT
                     AIMVTIGGKAARAHVLVRPHPVGLQLLGDSLFRAAEGSRGRTAAQVVDARGHEIGGFA
                     TRWRSSDPSIAAVDSLGNVTAMAPGRTIFTVTADTMVAQLPVEIYPVASSLTLLSGDG
                     QRAPAGRRVSQPVTVQVVSRSGRPIPGVPVRFALEEGAGRTEPQADSSDAQGIARASW
                     TLGGFPGRQTLSVIAEGIPTPTVVTAEAEPVAANTRITVVSE"
     gene            complement(1046..1435)
                     /locus_tag="VFD73_06925"
     CDS             complement(1046..1435)
                     /locus_tag="VFD73_06925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73750.1"
                     /translation="MTTLVLGLSLGAPMAADAQNASAAWQTTPASVLKNSLRTIVAAQ
                     EKYRATHPVFASTVEALRVNAGPDVTIQILGVTPSGWRAKATHRARPGRSCVVFVGPL
                     TTAELPKTDGDGEMAGEEGVPLCDRME"
     gene            complement(1703..3358)
                     /locus_tag="VFD73_06930"
     CDS             complement(1703..3358)
                     /locus_tag="VFD73_06930"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron-transfer flavoprotein:ubiquinone
                     oxidoreductase"
                     /protein_id="HZI73751.1"
                     /translation="MSTITPSRHQVPLPLDRLILREQPGTEAIEMDVLIVGAGPAGLA
                     CAIELTRLVSRDREAGGSMPELNIAILEKAESLGEHSLSGAVVNPRAFRELFPDLALE
                     DLPFRQPVTNEAVYLLTEHRAQRIPTPPTMHNRNYFTASLCEMVRWLGERAEAAGINT
                     FTGFPVDALLVEGNAVRGVRTTPSGLDREGNRGSGYTEPTDLTAKVTVLAEGTRGLLS
                     QAYREWQQIGSPNPQLYALGVKEVWETKQPLDRVVHTLGWPLPRDAFGGSFMYPLGPS
                     QIALGLVVGLDYHDARLDVHQLLQQMKLHPLFRSFLEGGQLLEWGAKTIPEGGYYSLP
                     DRRYGDGVLLVGDAAGFVDVPSLKGIHYAMQSGIYAARAAFGALRDGSVTAQQLASYD
                     RMVDESYLRDDLYRTRNMRLAFRDGFYRGGIKAGLMTLTGGRFPGGKISMPADAAVSR
                     STQNGATAVSADPLTISKLDAVFKSGNATRDTIPSHLLIGPDITAEVAEFYSHVCPAG
                     VYERVGDQLRVNPPNCVDCKATDVLGPRWTPREGGSGPKYRLM"
     gene            3425..>3852
                     /locus_tag="VFD73_06935"
     CDS             3425..>3852
                     /locus_tag="VFD73_06935"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HZI73752.1"
                     /translation="MDLSKAVRDRWVWGQTILGLIILLLAPLLPRYVNLDGLDFLLNR
                     VDPNWIRWLGCIPLVAGIGILVYGAASLGRNLTLGIEPLSDGQLVTSGAYTHVRHPIY
                     AGVVLLLTGYTLVWSNWTLALLVGAVARFYFDAKARAEER"
BASE COUNT          699 a         1266 c         1162 g          725 t
ORIGIN      
        1 ctcgctcacc acggtgatcc gcgtgttcgc ggcaaccggt tccgcttccg cggtcacgac
       61 ggtcggcgtt ggaatccctt cggcgatcac cgacaacgtc tgccgccccg gaaatccacc
      121 gagcgtccac gaggcccgag cgatgccctg ggcatcggag gagtccgcct gaggctcggt
      181 tcgtccggct ccctcttcca gggcgaagcg gaccggcact cccggaatcg gtcgcccgct
      241 gcgagagacc acctgcaccg tcaccggctg agagacccgg cgcccagccg gtgcgcgctg
      301 tccgtctccc gagagaagcg tcagcgacga agcgaccggg tagatctcga ccggcagctg
      361 ggcgaccatc gtgtccgcgg tcacggtgaa gatcgttcga cccggagcca tcgcggtcac
      421 gttgccgagg ctgtctaccg ccgcaatgga cggatccgag gaccgccacc gggtggcgaa
      481 cccgccgatc tcatgtccgc gcgcatcgac cacctgggcc gcggtgcgtc cgcgacttcc
      541 ctcggctgcc cggaacagac tgtcgcccag cagctgcaat cccaccgggt ggggtctcac
      601 caggacgtgc gctcgagcgg ccttgccgcc gatggtgacc atgatcgctg ttccaccacc
      661 accccgcgcg atcacggtgc ccgcactgtc cacggtagcc accatcgtat cgctgctgtt
      721 ccacaccgtc ggcgcaccca gcagcgcgtt gcctcgcgcg tcggtcgctg tcacggcgag
      781 ctggatcgtg tccccgatcg ccgtcgcggt atccaccgta ggcgaaatac cgatccagcg
      841 aaccgatgcg tgcgccaatc cctcgctggc aaccgaatcg atcccgtcca tcttggactt
      901 gatcgagtgg gtgtatgaca ggatcgagac caacccggcg cccgccgaga tcacaccagc
      961 tccccagcgc caggcactgc tgatcacacc gtgcggccgg agagcccggg gcagcgccgg
     1021 cttcggtccc gggatcggtt ctcgtctact ccatccggtc acagaggggc accccttcct
     1081 ctcccgccat ttctccatcc ccatcggttt tggggagctc ggcagtagtc agtggtccga
     1141 cgaacaccac gcagcttcga ccgggccgcg cccggtgggt tgccttggcc cgccagccac
     1201 tcggggtgac gccaagaatc tgaattgtca cgtccggccc ggcattgact cgaagcgcct
     1261 ccaccgtgct ggcaaacacc ggatgagtcg cccgatactt ttcctgggcc gcgacgattg
     1321 tacgcaacga attcttgaga accgatgccg gagtcgtttg ccatgcggca ctcgcgttct
     1381 gggcatcggc cgccatgggc gcaccgaggc tcagtccgag cacgagagtc gtcatgtacc
     1441 gagctcgaga catcgttccc cctgctttcg gcaccagcgc cggagggcgg cgtatcttca
     1501 gccagccatc cgtccctcat gttccgaagg ccttgaggca catctatttt cgacagaata
     1561 gacgaaactc acaattcata agaacgcgac agcgtcaaca actcaggcag gcagaaaatt
     1621 gcagagcaga tcaaccggcg gaatcgattg cgaccgactc ggctagctgg tgcaatcatt
     1681 cgcaaccaaa acttgcagcc gactacatca ggcggtactt cggcccgctt cctccttccc
     1741 gcggcgtcca tcggggtccc agcacgtctg tcgccttaca atcgacacag tttggcggat
     1801 tgaccctgag ctgatctcct actcgctcgt acacccctgc gggacacacg tgggaataaa
     1861 actccgcgac ttcggccgtg atatcaggtc caatcaacag gtgcgaaggg atggtatcgc
     1921 gggtggcatt gccagacttg aagacggcgt cgagcttgct gatggtaagc ggatctgccg
     1981 acaccgctgt ggctccgttt tgcgtggaac gggagacggc cgcatccgcc ggcatggaga
     2041 ttttgcctcc cggaaagcgg ccgccggtga gcgtcatcag acccgctttg atcccgcccc
     2101 ggtagaatcc gtctctgaac gccagacgca tgttccgggt gcgatacaga tcatcccgca
     2161 ggtagctttc gtccaccatc cgatcgtagc tggccaattg ctgggccgtg acactgccgt
     2221 ctcgcaaggc cccaaatgca gctcgggccg cgtaaatgcc ggactgcatg gcataatgga
     2281 ttcctttgag ggacggaaca tctacgaacc ctgcggcatc tcccaccagc aggacgccat
     2341 cgccataccg tcgatccggg agcgagtagt agccaccctc aggaatggtc ttggcacccc
     2401 actcgagcag ctgacctcct tcgaggaagg agcggaacag cgggtgcagc ttcatctgct
     2461 gcagcaactg atggacgtcg agacgcgcgt cgtggtagtc caatccaacc accaaaccca
     2521 gggcaatctg actgggtccg aggggataca tgaagctgcc gccgaaggcg tcgcggggca
     2581 gcggccaacc cagcgtgtgg accacgcggt ccagcggctg cttggtctcc cacacctctt
     2641 tgacacccaa ggcgtacaat tgcggattag gcgagccgat ctgttgccat tcccggtagg
     2701 cttgacttag gagtcctcga gttccctccg ctagtacggt cacttttgcg gtgagatcgg
     2761 tcggttcggt atacccgctt ccgcgattgc cttcccgatc gagcccggac ggcgttgtgc
     2821 ggacgccccg aacggcgttg ccctcgacca ggagagcatc caccggaaag ccggtaaacg
     2881 tgttgatgcc ggctgcctcg gcccgctcgc cgagccagcg caccatttcg cagagcgacg
     2941 cggtgaagta gttgcgattg tgcatcgtcg gtggcgttgg gatccgctgc gcccgatgct
     3001 cggtcagcaa gtacaccgcc tcattggtga ccggctggcg aaacggtaga tcttccagcg
     3061 caaggtccgg gaacagctcg cggaaggcac gcgggttgac gacggcgccg gacagactgt
     3121 gctctcccag actttccgct ttctccagga tggcaatatt gagttcgggc atgctgccgc
     3181 ctgcctcgcg gtcgcggctg accagtcggg tcagctcgat tgcacatgcg aggccggcag
     3241 gcccggcacc cacgatgagt acgtccatct cgatcgcctc ggtgccaggt tgctcccgta
     3301 ggatcaatcg atccaatgga agcggtacct ggtggcgact gggagtaatg gtggacacga
     3361 cgtgggctcc tgggatggga tgaagcgggt ctaatataac gatgcccaac gaggctcatc
     3421 gctcatggat ttgagcaagg ctgtgcgcga ccgctgggtc tggggccaga ccatcctcgg
     3481 cttgattatt ctgctgctcg ccccattgct cccgcgatat gtaaacctcg atgggctgga
     3541 cttcctgttg aaccgggtgg atcccaactg gattcgctgg ctcggatgta ttcccctcgt
     3601 ggccggcatc gggattctgg tgtatggcgc cgcttcactc gggcgcaatc tcactctcgg
     3661 catagaacct ctgtcggatg ggcaactggt cacgtcggga gcctacaccc acgtacgaca
     3721 tcctatctat gccggcgtcg tccttctgct taccggctat accctggtgt ggagcaactg
     3781 gacgctggcc ctcctggtgg gagccgtggc tcgattctac ttcgacgcga aggcgcgggc
     3841 agaagagcgg tg
//
LOCUS       DASRPQ010000587         1759 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1956580, whole genome shotgun sequence.
ACCESSION   DASRPQ010000587 DASRPQ010000000
VERSION     DASRPQ010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1759)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1759)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1759
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1956580"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            453..1706
                     /locus_tag="VFD73_06940"
     CDS             453..1706
                     /locus_tag="VFD73_06940"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HZI73753.1"
                     /translation="MSPHPLVLPQRIDSQSGVQPESRAAASARLERVRRDFLLFAQPA
                     VGQEEIDEVADTIRSGWITTGLRTHQFEAAFKDRVDAPAALAVTSCTAGLHLALLISG
                     VQPGDEVITSPLAFYGCANAIEHLGAVPRFADVAADTLTLDPSSVEAAVTPRTRAVLA
                     GHYAGHPAELDSLRDIAERRHLSLVEDAADAMPASYKGRLIGSGENVAAFSFHSTKNL
                     TTGEGGMLTGSPECIARARLLALQGTNRDAWQRSGPLGSWLYQVHEAGFKYRMTDIPA
                     ALGLAQLRQLDEFQRRRRLIAALYTEAFRQIDALETPTERPEVEHAWHLYVLRLRLGA
                     LRIGRSRFIEELRARNIGSSVHFIPIHLQPYYQTRYAHRPDQFPVALGNYQRMISLPL
                     HPRMSDEDASDVVEAVVDVVSRFSR"
BASE COUNT          317 a          574 c          529 g          339 t
ORIGIN      
        1 gaggctccgt ggggcggcta caaggcatcg gggttcggaa gagagctcgg ccactgggca
       61 gttgaggaat atctggaaac aaagcaggtg ttcatcaacc tggatgagaa gcctatcggt
      121 tggtattgag gtagtcgtca gtcgtcggtc gtcagtcgtc agtcataatc gtccaggccc
      181 actggcggct ggcgactgac gtctgacgac gatcgaccag ttgcactcgc gcaacgaccc
      241 gccgccactc ccccggctgc aaattctgtc attcacgatc gaactcgttg tcatctatcg
      301 tgcttgcctc ctgcgtgacg ggcacgaagc tcgcattccc cgccctcgat cagcagtaag
      361 catccaccca tacatcgcag ttagaggagt cgcatgtcga cgcccgttcc gtctcccagc
      421 ggcttcctcc gcccacttcc cgatagcggc cggtgagccc acaccctctc gtcctgccac
      481 agcggatcga ctcgcaatcc ggagtgcagc ccgagtcacg ggcggctgct tccgctcggc
      541 tggagcgggt tcgtcgtgac ttcctgctct tcgctcaacc cgccgtcggc caggaagaga
      601 tcgatgaggt cgccgacacc attcggtcag gctggatcac caccggtctc aggactcacc
      661 agttcgaagc agcgttcaag gatcgggtag acgcgcccgc tgccctggca gtcacctcct
      721 gtactgccgg cttgcacctt gccctcctga tttcgggagt gcagccgggc gacgaggtga
      781 tcaccagccc attggcgttc tacggctgcg ccaacgcgat cgagcacctg ggcgcagtcc
      841 cccgatttgc cgatgtggca gcggacactc tcacgctgga cccgtcctca gtcgaagcag
      901 cggtgacgcc gcggacccgc gcggtgttgg ccgggcacta cgccggccac ccagcggaac
      961 tcgattcttt gcgggacatt gccgaacgga ggcacctctc tctggttgag gacgccgctg
     1021 atgcgatgcc ggcgagctat aagggccggc tcatcggcag cggtgagaac gtcgctgcat
     1081 tctcattcca ctccacgaag aacctgacga ccggtgaggg cgggatgctg acgggatcac
     1141 cggagtgcat cgcccgggct cgcctcctgg cgctgcaggg gaccaatcgg gatgcgtggc
     1201 aacggtcggg gccgctaggc agctggcttt atcaagtcca tgaggcgggc ttcaagtacc
     1261 gcatgaccga tataccggcc gcgctgggac tggcgcagct ccggcaactc gacgagttcc
     1321 agcggcgccg ccggctgatc gccgccttgt acaccgaggc gtttcgccag atcgatgcgt
     1381 tggaaacacc gacggagcgc cccgaggtcg agcacgcctg gcatctctat gtgctgcggc
     1441 ttcgtctcgg cgcattacgc atcggcagga gccggttcat tgaagagctg agggcccgga
     1501 acatcggcag ctcggttcac tttattccga tccacctgca gccatactac cagacacgat
     1561 acgcccatcg ccctgatcaa tttccggttg ctctgggcaa ctatcaacgg atgatcagcc
     1621 ttccactgca tcctcgcatg agcgacgaag acgcgagcga tgtcgttgaa gcggttgtcg
     1681 acgtggtctc ccggttctct cgatgacctc gactcccttc cagatcaccg cggtcgtcga
     1741 agaccttctc ggacgtgag
//
LOCUS       DASRPQ010000588         1077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4141854, whole genome shotgun sequence.
ACCESSION   DASRPQ010000588 DASRPQ010000000
VERSION     DASRPQ010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4141854"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(70..>1077)
                     /locus_tag="VFD73_06945"
     CDS             complement(70..>1077)
                     /locus_tag="VFD73_06945"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR01930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HZI73754.1"
                     /translation="PEGATGGNIARLAAFRAGIPASAAGVTVSRFCASGLEAIAHAAK
                     RVIVDQVPVSVAGGVESISLVQNEHANRFRNRDPWIMEIKPETYMPMIDTAEVVAKRY
                     NISREVQDEYALVSQQRTAAAQAAGKLDDVIIPVTAKMAVVHRDTNEITYREVTATKD
                     ECNRPDTTLEGLAALKPVRDGGTITAGNASQLSDGAAAVLVMEAKLAEKRGLQPLGFY
                     RGLAVAGCEPDEMGIGPIYAVPRLLERKGLKIDDIGLWELNEAFAVQTVYCRDKLGLP
                     MERLNVNGGSISIGHPYGMTGARLVGHALIEGKRRGAKYVVVTMCIGGGMGAAGLFEV
                     A"
BASE COUNT          205 a          354 c          308 g          210 t
ORIGIN      
        1 ctcggagagg acaatattag gctgatactc gagcattcct tacctccatg cacttgctga
       61 taatgagagt tacgctactt caaacaggcc ggcagcgccc atgccgccac cgatacacat
      121 ggtaaccacc acgtacttcg caccgcgacg tttgccctcg attagcgcgt ggccaaccag
      181 acgagcaccc gtcatgccat agggatgacc aatagaaatt gagccgccgt tgacattgag
      241 ccgctccatc gggagcccta gcttatcacg acagtagacc gtctgcaccg caaaagcctc
      301 gttgagctcc cacaggccga tgtcgtcaat cttcaagcct ttccgctcca ggagccgtgg
      361 gactgcatag atcgggccaa tgcccatttc atcgggttca caaccggcca cagccaggcc
      421 acgatagaag cccagaggct ggagtccccg cttctcagcc agcttggcct ccatcaccag
      481 cactgctgcg gcaccgtcgg agagctgact ggcattgccg gccgtaatcg tacccccatc
      541 ccgcacaggt ttgagggccg ccaggccctc cagggtggtg tcgggccggt tgcattcgtc
      601 cttggtggca gtgacttctc ggtaggtgat ctcattggtg tcgcgatgca ccacggccat
      661 cttggcagtc accgggatga tcacgtcatc caacttcccg gccgcctggg ctgctgccgt
      721 gcgctgctgg ctcaccagag cgtactcgtc ctggacctcg cgactaatat tatagcgctt
      781 ggccaccact tcagccgtgt cgatcatggg catatacgtt tctggtttaa tctccataat
      841 ccagggatca cgattgcgga agcgattggc gtgctcgttc tgcaccaggc tgatggactc
      901 gacgccgccc gcgaccgaga ccggcacctg gtccacgatc actcgcttgg ccgcatgggc
      961 gatggcctcc aggccagagg cgcagaaccg gctgacggtc acgcccgcag cgctggccgg
     1021 gatgccggcg cggaacgcgg cgaggcgggc gatgttgccg ccggtcgcgc cctcggg
//
LOCUS       DASRPQ010000589         1051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1635754, whole genome shotgun sequence.
ACCESSION   DASRPQ010000589 DASRPQ010000000
VERSION     DASRPQ010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1635754"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..760
                     /locus_tag="VFD73_06950"
     CDS             <1..760
                     /locus_tag="VFD73_06950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73755.1"
                     /translation="ATVTGAQGDDRPVQNVVAEFNRKFAKTQQQLDTVLQWIASQAVT
                     QQAPRQPAAVDKTQVSDEDLWALAQQGDRQAFEMYQERIADRRIKQEATVQNRARLVQ
                     GQLTALMGKYPVLNNAQHPLTQYVNAAYQAYLGQGYPAGQETLLEAAKTAIADRPDLV
                     AELHAQGAVAREGARRSATQTAQSGVTGASHRQSSTPANSTATKALTPEQRDLARRMG
                     VKDGRKSIERFLQRQQDGQSSLGGVRAFVNEEEL"
     gene            760..>1051
                     /locus_tag="VFD73_06955"
     CDS             760..>1051
                     /locus_tag="VFD73_06955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73756.1"
                     /translation="MPKGVPTIGSKSEGVKVLGVINDPNILDPTPQGTDTQWQGADGQ
                     VSMAEPPPPWELSSNSELSDSDARRFVEAPANITLRWINPRVLDSEGWRDWQP"
BASE COUNT          214 a          350 c          327 g          160 t
ORIGIN      
        1 cgccaccgtt accggcgctc agggagacga ccgccctgtc cagaacgtgg tcgcggagtt
       61 caatcgtaag ttcgccaaga cgcagcagca gctcgacacc gtgttgcagt ggatcgcttc
      121 tcaggcggtg acacagcagg ccccccgcca gcctgccgct gtggacaaga cccaggtatc
      181 cgacgaggac ctgtgggccc tggcgcagca gggtgaccgg caagccttcg agatgtacca
      241 ggagcgcatc gccgaccgcc gcatcaaaca ggaagcgacc gtacagaatc gtgcgcggct
      301 cgttcaaggc cagcttaccg ccctcatggg caaataccct gtgctcaaca acgcccagca
      361 cccgctcacc cagtacgtga acgccgcata tcaggcgtac ctcggacagg gctacccggc
      421 ggggcaggag accttgctgg aggccgcgaa gacggccatc gcagaccggc ccgatcttgt
      481 ggccgagctg cacgcacagg gtgcggtcgc tcgtgagggc gcccgtcgca gtgccaccca
      541 gacggctcag tctggcgtca ccggtgcgtc tcaccggcag agcagcactc ccgccaactc
      601 gaccgctacc aaggcgctaa ccccggaaca gcgcgacctc gcccgacgca tgggtgtgaa
      661 agatggacgc aagtccatcg agaggttcct gcaacgtcag caggacggtc aatcgagcct
      721 cggaggcgtc cgcgccttcg tgaacgagga ggagctgtaa tgcccaaggg cgtgccgact
      781 attggttcta agtccgaggg cgtaaaggtc ctcggtgtca ttaacgatcc caacattctc
      841 gatcccactc cacaggggac tgatacccag tggcagggtg ccgacgggca ggtcagcatg
      901 gccgaaccgc cgccgccgtg ggagctgtct tccaactccg aactgtcaga ctccgatgct
      961 cggcgcttcg tggaagcccc tgcgaacatc acgcttcgct ggatcaatcc ccgagtgcta
     1021 gacagcgaag gctggcggga ttggcagccg g
//
LOCUS       DASRPQ010000590         1344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_384662, whole genome shotgun sequence.
ACCESSION   DASRPQ010000590 DASRPQ010000000
VERSION     DASRPQ010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1344
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_384662"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..366
                     /locus_tag="VFD73_06960"
     CDS             <1..366
                     /locus_tag="VFD73_06960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73757.1"
                     /translation="KTNTRSDPMVSTARIILRDAAGPVTDEVERKLSPLERAWGNALV
                     RKTVLILALAPDLGGLWAGAQQPAAVPDLVGHVAVAHRACRRRLPSGARLGFDKSAAD
                     GYVAGVLLAGALTILAIVG"
BASE COUNT          193 a          480 c          404 g          267 t
ORIGIN      
        1 aagacaaaca cgcggagtga tccgatggtc tccacagcac gcatcatcct ccgcgacgca
       61 gccggcccag tcacggacga ggtcgaacgc aagctcagcc cgctcgaacg ggcctggggt
      121 aatgccctag tccgcaagac cgtgctcatc ttggcgttag cccctgatct gggaggtcta
      181 tgggcgggcg ctcaacaacc cgctgctgtt cccgaccttg tcggacacgt tgcagtcgct
      241 caccgagcat gtcgccgacg gctcccttcc ggcgcgcgcc tgggcttcga taaaagtgct
      301 gctgatggtt acgtcgccgg cgtgctgctc gcgggtgcgc tcaccatcct ggccatcgtc
      361 gggtagccgg gctccgttgc cggaacccag ccccctcaga accggacgtg ctgattgctc
      421 cgcatccggc tcaagcctcg gccgctttat cttggcggcg cggaagatcc ggtcctggat
      481 gcgccctacg accgcctccg gcgcggccca atcgacatcg gaccacctca tcggctgtcg
      541 cccgtcggtc tgttcggctc tcaccgtcta acgtctccga ccggcactgg cgtccaggtc
      601 catggcttcc gctgagacct gccggaagtc tgcgcccttt cgggccgggt ctcccccgct
      661 cgcgcgggcc ctatccgccc cattacaggg cggccttcgc ttgctccggc tctcctctac
      721 cccctgcgcc gtcaccctcc cttgcggtcg ggcttccgtc tcgcgacggg acgagtgggg
      781 cttaccctgt tgcccgaggg ggagatccga ccggggcggc tgcgcccttt cgtccggcgg
      841 gagttggtgt caccgtcgcc agtggtgcca tctggcgatc cgacccgctg accttttggt
      901 ccaggccacc agcctcttgg gcctgtttta cggttacgga ctttagacgg gcgttcgctt
      961 gcgctcagcc tttcggtctc cgctagggcc gacccagatc gaggcttcca ggcctcagcc
     1021 cattgtcccc ggcgctcggc acgtcggatt gctcctccgc gctgccgggt agcggcaccc
     1081 aggtgaatgg ggtcttctct ccgtgaagca ctccttcctt ctcgggcctt ccgccgccag
     1141 cccccaggtg tgatgggcat ctggcagctc aggtcgcaca ataccagcga aaatgtcgat
     1201 tacgccggag caacaaacct cttgatctga acgggcttgc cccgcagact gcggcccaac
     1261 cacaacagca tggacggggg cggacccttc tctcgggaga gagcacatgg gctaccgctt
     1321 ggattggcgt ctacttggac gtga
//
LOCUS       DASRPQ010000591         2071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2588347, whole genome shotgun sequence.
ACCESSION   DASRPQ010000591 DASRPQ010000000
VERSION     DASRPQ010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2071
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2588347"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..349
                     /locus_tag="VFD73_06965"
     CDS             <1..349
                     /locus_tag="VFD73_06965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73758.1"
                     /translation="GAGMVSAPALVLGLLCLGQIGVSATPPLLWPIPTAFLTGSSAAA
                     GIAAINSIGNLSGFAGPYVMGYLKDVTGSFTAGLLVLGGCALAGGIAAMTLKVSRQLE
                     VATAGPGKPAPVR"
     gene            706..1893
                     /locus_tag="VFD73_06970"
     CDS             706..1893
                     /locus_tag="VFD73_06970"
                     /inference="COORDINATES: protein motif:HMM:NF033540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HZI73759.1"
                     /translation="MSVAVWSGSLVAWERELAALKERIGPVFGRAETRETAGAFLDGL
                     LSGVARKTGWLLAEQAGLERPYRMQSLLGGSRWDADGLRDRVRADVIEALGDRDGVLV
                     VDETGFMKKGEHSVGVARQYSGTAGRIENCQIGVFLAYASRYGQALIDRCLYLPEAWA
                     QDESKRAKAGVPEGITFATKPQIACALIAQALDAGAPCAWVLADALYGTDSRLRRMLE
                     KREQPYVLAVRSNHRLRFWTEEGLEETDPAAMADALARDAWATHTAGEGPKGLRVYEW
                     ARLPLSSRQDRGFEHWLLIRRSRREPDKRAYYFVFAPVGVSLGELAGAAGLRWTIEEC
                     FERAKDDLGLDHCEARSWHGWHRHMSLCLTAAAFLVRLAADLRRATWGKANERSPATP
                     AAA"
BASE COUNT          330 a          647 c          733 g          361 t
ORIGIN      
        1 gggcgcgggg atggtctccg ccccagccct ggtgctgggc ttgctctgcc tgggccagat
       61 cggcgtttcc gcgacgcccc ctctgctgtg gccgataccg accgccttcc tgacgggcag
      121 ttcggctgcg gccgggatcg ccgcaatcaa ctcgatcggc aacctgtccg ggttcgccgg
      181 accctacgtg atgggctacc tcaaagacgt gaccggcagc ttcacggccg ggctgctggt
      241 cctgggcggc tgcgccctgg ccggcggcat tgcagctatg acgcttaagg tcagccggca
      301 gctggaggtc gccaccgctg ggccgggcaa gccagcgccg gtgcgctgag aggatcctcg
      361 aggtcgattg caagagggag cgggcacgcg gtcgcaaagg gcagacgagg aaggcgtcgg
      421 tcgatgagcg gtattgcctt ggcgtccttt cgcaccgctg caacgcgcgc cgcgcccgcg
      481 agctgggctt caaggctgaa aactgttcga ggtaattgtc cgcattcaca ccgaggatga
      541 gttaggcgga cgcttcgtgg cgtagccctg aacggggccg ggtcacatca aacaacagcg
      601 tatatgatag gaggcgcgcc acgtcagtgt ggcctcccat ctagtactac agttgcgtct
      661 gtgatgaagg tatgaccctc ttctgggcag gtgtggaggg ggttgatgtc tgttgcggtc
      721 tggtcgggct cgctggtcgc gtgggaacgc gaactagcgg ccttgaagga gcggatcgga
      781 cctgtgttcg gcagggccga aacacgggag accgccggtg ccttcctcga cggcttgctg
      841 tccggggtcg cacgcaaaac aggctggctt ctggccgagc aggcggggct tgagcggccc
      901 taccgcatgc agtcgctgct ggggggcagc cgctgggatg cggatggcct gcgtgatcgc
      961 gtccgcgctg acgtgatcga ggccctcggg gatcgggacg gcgtgctggt ggtcgacgag
     1021 accgggttca tgaagaaggg cgagcactcg gtcggggtcg cacgccagta ttccggcacg
     1081 gcggggcgga tcgaaaactg ccagattggc gtgttcctgg cctatgccag ccgctacggg
     1141 caggctctga tcgaccggtg cctatacttg ccggaagcct gggcccagga cgagagcaag
     1201 cgggccaagg ccggcgtgcc ggagggcatc accttcgcga ccaagccgca gatcgcctgc
     1261 gcgttgatcg cccaagcgct tgatgccggc gcaccctgtg cctgggttct ggcggacgcc
     1321 ctgtatggga ccgactcgcg gctgcgccgc atgctggaga agcgggaaca gccctacgtg
     1381 cttgcggtgc gctccaacca ccgcctgcgc ttctggaccg aggaggggct ggaagagact
     1441 gaccccgcgg caatggccga tgctcttgcg agggatgcct gggccacaca taccgccggt
     1501 gagggcccga aggggcttcg cgtgtatgag tgggcgcgcc tcccgctgtc ctcacgccag
     1561 gatcgaggct tcgaacactg gctcctgatc cggcgcagtc ggcgtgagcc cgacaagcgg
     1621 gcctactatt ttgtctttgc gccggttggc gtctcgctgg gcgaattggc gggcgcggcg
     1681 gggctacgct ggacgattga ggagtgcttc gagcgcgcca aggatgatct cggtctcgac
     1741 cactgcgagg cgcgctcctg gcacgggtgg caccggcaca tgagcttgtg cttgacggct
     1801 gcagccttcc tcgtccggtt agccgccgac ctgcgtcgag cgacctgggg caaagcgaac
     1861 gaaaggagtc cggccacccc agcggccgcc tgatgagcct gacagcgctc ctgccgacgg
     1921 tgcccgagat ccgctatctt ctggcccgtc tccggctcag gccgccacgc cggacccgct
     1981 tcgtcatggc ttggtccctc tggcgacgaa aacaccaagc caaggcggca gccgctcact
     2041 accgccgtca atccaaaacg caactgtagt a
//
LOCUS       DASRPQ010000592         2658 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1322905, whole genome shotgun sequence.
ACCESSION   DASRPQ010000592 DASRPQ010000000
VERSION     DASRPQ010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2658
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1322905"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..325)
                     /locus_tag="VFD73_06975"
     CDS             complement(<1..325)
                     /locus_tag="VFD73_06975"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73760.1"
                     /translation="MRTLDYGLSTFDSLLMPPRHRRAPQVHKFGGASLADSTAVRHAV
                     SLIQSFRPEPTVIVASAMAGVTDALLEVARQTARGDEHAVAALLAQLRARHAEVARTL
                     LTTERI"
     gene            372..887
                     /locus_tag="VFD73_06980"
     CDS             372..887
                     /locus_tag="VFD73_06980"
                     /inference="COORDINATES: protein motif:HMM:TIGR03546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03546 family protein"
                     /protein_id="HZI73761.1"
                     /translation="MFALLKLIQSIIKTLHSAGTPAQVAAGMALGSALGLTPIMNLHN
                     LVIISLLVLLNVSFGGGMLGWMLFVPVGFLLDPLFDRIGLSLLTTPSLRPLWTNLTNT
                     PVLPYTNFNNTIVLGSFVAWLVLAVPIFFAARYGVSRYRATVGERVRQSRFYKAVTAS
                     QVYNIYKMFRP"
     gene            884..>2658
                     /locus_tag="VFD73_06985"
     CDS             884..>2658
                     /locus_tag="VFD73_06985"
                     /inference="COORDINATES: protein motif:HMM:TIGR03545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03545 family protein"
                     /protein_id="HZI73762.1"
                     /translation="MRRQVFRWKAIGPLLLLFVILGFLVWLFAEPVARDTTEEASSEL
                     LGTEVDLAKLDLLPRQASVELGGLQIADPFVRTRNLLEAEHILLKLNPSALAEKKIVI
                     ENLKLEGMRFGTRRTKPARPNSGKGFAPQAYRAVEQWVGQFNVPLLSLTPIDTIRQIA
                     LNPGQLTTVREAQAMLGRTDSTRKELERNFQQLNIRPTLDSARALARQLAATDPKTLG
                     VQGTHQALESVQQMLRSVAAAKQRVETLEQQTDAAMEMLTRGVRSVDQARQRDYAFAR
                     SLLRLPAFSAPEMGTAFFGKVSIDRFKQALYWAELAQKYMPPGLLPRPTPGPKRLRAA
                     GSTIEFPKLKEFPSFLLEQGRLDFHIGGSSPLTGSYAASVQGLTSTPALYGHPAVITA
                     GRQAARSSLGSIDAKAIIDHLSARTLDSATAELRGIELPTFSIPGVPFRVTPGVGSSD
                     LAFSLRGDQLFGRWAIRSNQVRWGADSTAHSLNDVERVVWRVLSGLNTLAVSAELRGT
                     VRSPQLSVSSNLDQAISKRLTAVIGEEVAKAEQKMRAKVDSLIGEKLDQLQRQVASVR
                     SEANARVAGDKQQVAQAQDELNAQL"
BASE COUNT          505 a          832 c          824 g          497 t
ORIGIN      
        1 agatccgctc ggtggtgagc agagtccgag caacctcagc gtgccgggct cggagctgcg
       61 ccagcagcgc ggcaactgcg tgctcgtcac cccgggcggt ctgccgcgct acctcgagca
      121 gcgcgtcggt cacacccgcc atggccgacg caacgatgac cgtcggttcc gggcgaaagc
      181 tctggataag cgagacggcg tgacgaacgg cggtcgagtc ggccagggaa gcgccgccga
      241 acttgtgcac ctggggggcg cggcggtgtc gtggcggcat gaggagagag tcaaacgtcg
      301 agagaccata gtcaagggta cgcatcatga gctcccttga ccggagaccc tagacgctag
      361 accgttctcg agtgttcgcc ctgctgaagc tcatccagtc catcatcaag acgctgcact
      421 ccgcgggcac gcccgcgcag gtggccgcgg gcatggcact gggctctgca ctcgggctca
      481 cgcccatcat gaacctgcat aacctggtca tcatttcatt gctggttctg ctgaatgtct
      541 ccttcggagg ggggatgctc ggctggatgt tgttcgttcc agttgggttt ctgctggacc
      601 ccctgtttga ccgcattgga ctgagtctgc taacgacgcc atccttacgg ccgctgtgga
      661 ccaatctgac gaacacgccg gtattgccgt acaccaactt caacaacaca atcgtgctgg
      721 gcagtttcgt ggcctggctg gtcctggcag tcccgatctt ctttgctgct cggtacggcg
      781 tcagcagata tcgggcgact gttggtgagc gagtccgaca gtcgcgattc tataaagccg
      841 tgaccgcatc ccaggtttac aacatctaca agatgttccg gccgtgagac ggcaggtctt
      901 tcgctggaag gcgatcggcc ccctgttgct cctgttcgtc attctgggat ttctggtgtg
      961 gctcttcgcc gaacctgtgg cgcgcgatac gaccgaagaa gccagcagcg agctgctagg
     1021 caccgaggtc gacctggcca agctggatct tctgccgcgg caggcctcgg ttgagctggg
     1081 agggctgcag atcgccgatc ccttcgtgcg caccagaaat ttgctggaag cggagcacat
     1141 cctgctcaaa ttgaacccgt cggcgctggc cgagaagaag atcgttatcg agaacttgaa
     1201 gctggaaggc atgcggttcg gaacccgccg caccaagccc gctcgaccca actccgggaa
     1261 gggctttgcg cctcaagcgt accgcgcggt agagcagtgg gtaggccagt tcaacgttcc
     1321 gctgctgtct ctgaccccga tcgacactat ccgccagatc gccctaaatc ccgggcagct
     1381 caccacggtt cgtgaggccc aggcgatgct gggccgcacc gattccaccc gcaaggaact
     1441 cgaacggaat tttcagcagc tcaacattcg acccacgctg gattcggcgc gcgcgctcgc
     1501 ccggcagctc gctgccaccg atccgaagac ccttggggtt cagggcaccc atcaggcact
     1561 cgaatcggtc cagcagatgc tacgcagcgt ggcagcagca aagcagcgag tcgaaacgtt
     1621 ggaacagcag acggatgcgg cgatggaaat gctgacccgg ggtgtccgct cggtcgacca
     1681 ggcgcgccag cgggactatg cctttgccag gtcgctgctc aggctcccgg cgttttctgc
     1741 tcccgagatg ggcaccgcct tcttcggaaa agtcagcatc gatcgattca agcaggcgct
     1801 ctactgggcg gaactggcac agaagtacat gccgcctggt ctgctgcctc ggccaacgcc
     1861 gggacccaag cggctgcgtg ccgccggatc caccatcgag tttccgaagc taaaggagtt
     1921 tcccagcttc ctgctcgaac agggccggct cgacttccat attggcggct ccagcccgct
     1981 gactggcagc tacgcggcga gtgtccaggg tctcacctcc acgcccgcct tgtacgggca
     2041 tccggcggtg atcaccgcgg ggcggcaggc agcccgcagc agtcttggat ccatcgatgc
     2101 caaggccata atcgatcacc tctctgctcg aaccttggat tcggccactg cggaacttcg
     2161 agggatcgag ctgccgacct tcagcattcc cggtgttccc tttcgggtca cgccaggtgt
     2221 cggcagcagc gatctcgcct tcagtcttcg gggcgaccag ctctttggac gctgggcaat
     2281 ccgcagcaac caggtacgat ggggcgcaga cagtaccgcg cattcgctga acgatgtgga
     2341 gcgagtcgtg tggcgggttc tctccggcct caacaccctt gcggtctccg cggaactccg
     2401 ggggacggtc aggtcacccc agctctccgt ctccagcaat ctggatcagg ccatctcgaa
     2461 gcgactcaca gcggtaattg gtgaggaagt cgccaaggcg gagcagaaga tgcgggccaa
     2521 ggtagacagc ctcattggcg agaagctcga tcaactccag cggcaagtgg cgtcagtacg
     2581 ctcagaggcg aatgctcggg tggcgggaga taaacagcaa gtggctcagg cccaggatga
     2641 gctgaacgcc cagctcaa
//
LOCUS       DASRPQ010000593         1656 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3515906, whole genome shotgun sequence.
ACCESSION   DASRPQ010000593 DASRPQ010000000
VERSION     DASRPQ010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1656
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3515906"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..648
                     /locus_tag="VFD73_06990"
     CDS             <1..648
                     /locus_tag="VFD73_06990"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HZI73763.1"
                     /translation="PTHWYLDSGGRANTSHGDGVLDTVPPNAAAAADTFTYNPGDPTP
                     YLIDSRELETSLNEDFAALNRSRSDALVYTSAPLTRPLEITGPMSATLWAASDARDTD
                     WNVMLLDVAPDGTARRVQDGVVRARFRRGYDRAVPLTPGRVERYTVDLWFTSRVFPPG
                     HRIRVTVSSALFPKYDRNLNTGGNNERDSAYVAAHQRVLHDRAHPSYVTLPMVPR"
     gene            784..1065
                     /locus_tag="VFD73_06995"
     CDS             784..1065
                     /locus_tag="VFD73_06995"
                     /inference="COORDINATES: protein motif:HMM:NF040444.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6496 domain-containing protein"
                     /protein_id="HZI73764.1"
                     /translation="MATKKKSSRKSSRRRYGKGASKSVESAMRRRKRGTLKRGKSGHG
                     GKVKSREQAIAIGLSEARKKGAKVPRKKSSSTGRKRSSRRKRSSSKSRS"
     gene            1127..1546
                     /locus_tag="VFD73_07000"
     CDS             1127..1546
                     /locus_tag="VFD73_07000"
                     /inference="COORDINATES: protein motif:HMM:TIGR02246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgcJ/EcaC family oxidoreductase"
                     /protein_id="HZI73765.1"
                     /translation="MPPDLAPEDQAGLERIVNQLEAAWNGMDGSAFAAPFAGDADFVT
                     IRGEHFRGRSAIGAGHTAIFRTIYAGSTVRFTVESARLLRPDIALLHVRSVLNAPSGP
                     LAGEHSACFSMVLTKERGSWEIAGFHNTLEAAPGPPR"
BASE COUNT          311 a          524 c          538 g          283 t
ORIGIN      
        1 cccactcatt ggtatctcga ctccggcggg cgagccaaca ccagccacgg cgatggcgtg
       61 ctcgatacgg ttcccccgaa cgcggccgcc gcggccgaca ccttcaccta caatccgggc
      121 gatccgaccc cgtacctcat cgattcgcgt gagctggaga cctcgctgaa cgaggacttt
      181 gccgcactca accgctcgcg ctcggatgcg ctggtctata cctcggcgcc gctcacgcgt
      241 ccactcgaga tcacggggcc gatgtcagcc acgctgtggg cagcgagcga tgcccgggac
      301 accgactgga atgtgatgct gctcgatgtg gctcccgatg gcacggcgcg gcgagtgcag
      361 gacggcgtgg tgcgggcgcg attccgtcgg gggtacgacc gggcagtgcc gctcacgccg
      421 ggacgggtgg aacgctacac ggtggatctc tggttcacct cgcgggtgtt tccaccgggg
      481 caccgaatcc gggtgacggt ctcttcggcg ctgtttccca agtacgaccg gaatctcaat
      541 accggcggca acaatgagcg ggacagcgcc tatgtggcag cgcatcagcg ggtgctgcac
      601 gatcgggcgc atccgtcgta cgtgaccttg ccaatggtgc cgcgctagcc gcgtcgacaa
      661 aacgtgcggc cgtcctgcgt atgcagcagt cgtttctttg tctcggatcc agacggcgtc
      721 atcattaata tcatgatcca gacgtctggt tctcactgag gtcacccaga tccgggaggt
      781 accatggcca cgaagaaaaa atcttcccgt aagtcgagcc ggcggcggta tggcaaagga
      841 gccagcaaga gcgtcgagag cgcaatgcgc cggcggaagc ggggcactct caagcggggc
      901 aagtcaggtc acggggggaa ggtgaagagc cgggagcagg cgatcgccat cgggctgtcg
      961 gaagcgcgga agaaaggcgc gaaggtcccg cgcaagaaga gcagttcgac cgggcgcaaa
     1021 aggtcctcac gacggaagcg ctcgagctcg aagtcgcggt cctaggagcg cccggcgggt
     1081 cggtcaagcg gcaaagcact aggtccatat ataaaggaag acaggaatgc ctcccgacct
     1141 tgccccagag gaccaggccg gtctcgagcg gattgtcaat cagctcgaag ctgcctggaa
     1201 cggtatggac ggatccgcct ttgctgcccc cttcgccggt gacgccgatt tcgtcaccat
     1261 tcgtggtgag catttccggg ggcgctccgc gattggcgca ggtcataccg caatcttccg
     1321 caccatctac gccggcagca ccgtccgctt cacagtcgag agcgctcgcc tgctgcgccc
     1381 ggacatcgcg ctcttgcacg tgcgctcggt gttgaacgct cccagcggtc cgctcgccgg
     1441 agaacacagc gcctgtttct cgatggtctt gacgaaggaa cgcggcagct gggagatcgc
     1501 cgggttccac aacacattgg aggctgcacc ggggccgcca cggtgagatg atgcccgcgg
     1561 ctgatccggc ccccaaaagg gtaatgagac gcatgcgccg gctgatgcag cgtgttctcc
     1621 gttcccaacc tctgagtcac cctgcggtct tggcct
//
LOCUS       DASRPQ010000594         1382 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4457645, whole genome shotgun sequence.
ACCESSION   DASRPQ010000594 DASRPQ010000000
VERSION     DASRPQ010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1382
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4457645"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..138
                     /gene="bldC"
                     /locus_tag="VFD73_07005"
     CDS             <1..138
                     /gene="bldC"
                     /locus_tag="VFD73_07005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003949541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="developmental transcriptional regulator BldC"
                     /protein_id="HZI73766.1"
                     /translation="VDPKTVTRWAKAGKLTSIRTLGGHRRYRETEVRALLAGIPQQRS
                     E"
     gene            complement(579..827)
                     /locus_tag="VFD73_07010"
     CDS             complement(579..827)
                     /locus_tag="VFD73_07010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73767.1"
                     /translation="MPVDSYSTLGRSCEPAFKWIPDPGQAPGPGAGSAAARQRGSAAA
                     RQRQTLAGGWSALGGHEVSCSFTWLGSSPEAQPARSRA"
BASE COUNT          216 a          458 c          463 g          245 t
ORIGIN      
        1 gtcgacccca agaccgtcac acgctgggcg aaggctggca aactgacctc gatccgcacg
       61 ctggggggac accggcgcta ccgggagact gaggttcgtg cactgctcgc gggtattccg
      121 cagcagcgct ccgagtgatc ttctgccgtc ttcgccatgc gggcgtccgt cagggaaccg
      181 ccagggtgaa tgcggcagca ctcgatcaat ggaatggggg gtcggccccg gtggcggagt
      241 gccgcaccga gggtgctgcc cggcagggaa atcgccccgc caggcacatc ccggcaggca
      301 cgttgccggg gccggtccgc tctcagggga gggtcgcacg atgcgtgatc cagaattggt
      361 cgcacgtgct cagcgcgccg cgacgcgcct ggaatctgca taggaacaat ggcgcgcgct
      421 gcatggactc gcggtcgcgc ccggacagcc ggtcgtaagc tacgtcggct attcgctgaa
      481 ggaaccctgg ggtgagcccc ggaaggcacc ggcgaatacc cgagttcggc gcttctgggc
      541 gcgccagtac ccttcggccg cggccgccag tcagcggatc aggcccggga tctggccggc
      601 tgggcctcgg gtgagcttcc cagccaggtg aacgagcagc tcacctcgtg gccgcccagc
      661 gcggaccagc cacccgcgag cgtctgacgc tgccgcgctg ccgcgctgcc gcgctgccgc
      721 gctgccgcgc tgcccgcgcc cggacccgga gcctggccgg gatccggaat ccacttgaaa
      781 gcgggttcac agctacgtcc tagcgtgctg taagaatcaa cgggcatgat cgttaccgaa
      841 gggccgagag atatctcgcc tttcccgtct gggctcgggg tggccaggcc ccgctccgag
      901 cccagacttc tttgctgtct gggcgtctcg cctgatcgct gccgggtgtt ctgcctggcc
      961 cggcgcctgg cccggacgcg gtagccaacg caagagccag tcgcgacctg accgggcagg
     1021 cccgggagtg aacgcgagcc tgagcccgaa cgcggacgca ctggaaccgg gcttcgactg
     1081 cgtcagaacg ccctggatcc tgggtttcat ggcgttccag caggtctccg acccacccgt
     1141 acggtgacgc tgatggtgtc ggtgtgacct gagtccggtc ttcttcgctg accaggggac
     1201 taccaacagc agagtctgct ggtatccagc gtttgcgtcg tacaatatat tcggggtcgt
     1261 ctactagccc gttccaggcc gttgatggtc gcatccttta cttctgactc tcgcgttaat
     1321 tttcgcccct cctatgcgcg tgcggaacat gcgtggcctt tttttaacaa tggcgggcag
     1381 cg
//
LOCUS       DASRPQ010000595         1517 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2262987, whole genome shotgun sequence.
ACCESSION   DASRPQ010000595 DASRPQ010000000
VERSION     DASRPQ010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2262987"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..264)
                     /locus_tag="VFD73_07015"
     CDS             complement(<1..264)
                     /locus_tag="VFD73_07015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73768.1"
                     /translation="MTERSSIIEVARALAVGWTAGGMEGAAQVIVQSGRPGHDAHLWA
                     TVAELVRQLPASDRMAVALTACQRNRRPIEVATRQGAQALHQDI"
     gene            complement(311..1135)
                     /locus_tag="VFD73_07020"
     CDS             complement(311..1135)
                     /locus_tag="VFD73_07020"
                     /inference="COORDINATES: protein motif:HMM:NF024752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZI73769.1"
                     /translation="MLSYRVMLDVPGELVLYVARLLLARRREIGTPRGSRALSCWQQA
                     VFTLAWFRDRPDVARLGRGFGISQATAYRYLAEAISVLAARSPGLARALEAAREQGLA
                     YLILDGKIVAADRCKEKTTSKKGKTIDRWYSGKAHRFGGNIQGLFNPAGTPLWVSPVS
                     PGGVHDLTAAREHVLPGLRPHLKDLPVLADLGYEGAGCGVHVPVRKPAGGQELDVDTR
                     TRNDLLRSARCLGERGFALMTQRWRTLQHVMISPSRISDIAQAVLVLTQFEHRMIT"
     gene            complement(1264..>1517)
                     /locus_tag="VFD73_07025"
     CDS             complement(1264..>1517)
                     /locus_tag="VFD73_07025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73770.1"
                     /translation="YGVAVPGDRKISWPWAAIVFVALLGIGWLTIRLIPINAKPTKGP
                     GTVSYPLSYTPTFGWLGNWIRIGLLILGIAVVIEVFSAK"
BASE COUNT          259 a          472 c          521 g          265 t
ORIGIN      
        1 tatgtcctgg tggagtgcct gagctccctg acgtgtagcc acctcgatcg ggcgccggtt
       61 gcgctggcag gcggtgaggg ccaccgccat acggtcagac gcagggagct ggcgcaccag
      121 ctcagcgacg gtcgcccaga ggtgagcatc gtggccgggg cggccggact ggacgataac
      181 ctgggcggcg ccctccatgc ctccagcggt ccagccgacg gcgagcgctc gggcgacttc
      241 gatgatcgat gatcgttcgg tcacggctgc gggtggaatg agggtgatag tgaggttttc
      301 tcagcgaatt tcatgtgatc attcggtgct cgaattgggt gaggacgagt acggcctggg
      361 cgatgtcgct gatccggctg gggctgatca tgacgtgctg gagagtacgc cagcgctggg
      421 tcatgagggc gaagccgcgc tcgcccaggc agcgggcgga gcggagcagg tcgttgcggg
      481 tgcgggtgtc cacgtcgagt tcctggccgc ctgctggctt cctcactggg acgtgaacgc
      541 cgcagcctgc tccttcgtag ccgaggtcgg ccagcaccgg caggtccttc aggtgggggc
      601 gcaggccggg aaggacgtgc tcacgggcgg cggtgaggtc atggacgccg cccggcgaca
      661 ccggcgagac ccacagcggg gttccggccg gattgaacag gccctggatg ttcccgccga
      721 agcggtgggc cttgccggag taccagcggt cgatggtctt gcccttcttg ctggtggtct
      781 tctccttgca ccggtcagcg gcgactatct tgccgtccag gatcaggtag gccagtccct
      841 gctccctggc cgcttccagt gcccgggcca gacccgggga acgggcggcg agcacgctga
      901 tggcctcggc caggtaccgg taggcggtgg cctgggagat cccaaagccc cggccgagcc
      961 gggccacatc gggccggtcc cggaaccatg ccagcgtgaa gaccgcctgc tgccagcagg
     1021 aaagcgcccg gctgccacgc ggcgtgccga tctcgcggcg gcgggccagt agcagcctgg
     1081 cgacgtacag gaccagttcc cccggcacgt cgagcatgac acgataagac agcacggagc
     1141 ctctcccggt agatgttgat cttcagcgag acctcttcta ccgggggctc cgcgcccatc
     1201 ccggaactgg cgttctgtct gcgtgtctac ccaggtgccc cagtaacgcc ctgggtgacc
     1261 ggatcacttc gctgagaaaa cctcaatgac aacagctatc cccaggatta gtaggccgat
     1321 cctgatccag ttgccgagcc acccaaatgt cggtgtgtat gagagcgggt aagagacggt
     1381 tccaggcccc ttggttggct ttgcgttgat cgggatcaac cggatcgtca gccagccaat
     1441 accaagaagg gcgacgaata caattgccgc ccatggccac gatatctttc tatcaccagg
     1501 aactgccaca ccgtaca
//
LOCUS       DASRPQ010000596         1560 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4142741, whole genome shotgun sequence.
ACCESSION   DASRPQ010000596 DASRPQ010000000
VERSION     DASRPQ010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4142741"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..495)
                     /locus_tag="VFD73_07030"
     CDS             complement(106..495)
                     /locus_tag="VFD73_07030"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZI73771.1"
                     /translation="MAEGSGGSAAYPYATHLNILYDPLEVVDVQTLVDECTDQWYNQT
                     LCRVNDSVVRLGVMQGEYHWHKHDNDDEFFYVIEGHFLIDLEDRTIDLAPRQGFVVPK
                     GVAHRTRAPQRAVILMVENAGIIPTGD"
     gene            complement(560..>1560)
                     /locus_tag="VFD73_07035"
     CDS             complement(560..>1560)
                     /locus_tag="VFD73_07035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73772.1"
                     /translation="GISLLRAPGFYARNLSLFVLPVLTAYFIWKRGLETGTVRWLGLA
                     LVAALAFANIYPFTSGGSSERLTALHLPIALWLVVGIAYAGGRWSQAAGRMDFVRFTG
                     ELFIYYVLIALGGGVFTGFMAMIFRAIGINAEPFFQSWLLPCGAAGAFVVASWLVEAK
                     QSVIENMAPVLTRLFTPLFAALLITFLATVVWTGRGIDIQRNVLIGFDLLLVVVLGLL
                     LYSISARDPQSPPSIFDVLQVVLLVSALLVDAVALWAIAARISEFGFTPNRVAALGEN
                     VILLVNLAWSAALYLRFLRRRGAFSALEQWQTDYLPVYAIWAALVAIAFPPLFGYA"
BASE COUNT          342 a          497 c          487 g          234 t
ORIGIN      
        1 gccggttgca ccgcgtcggc ttgcttttcg ctgtgatggc acgcgatcag ggcggcgagc
       61 accgcagccg cgcccaacaa cagcgcatct agagcgcgag ctggcctagt caccggtcgg
      121 gatgatgccg gcgttctcca ccatcaggat cactgcccgc tgaggagcgc gcgtccgatg
      181 cgccaccccc ttcggcacca cgaacccttg ccgaggggcc aggtcgatgg tccgatcctc
      241 caggtcgatc aggaaatgtc cttcgatcac atagaagaat tcgtcgtcgt tgtcgtgctt
      301 gtgccagtga tattcgccct gcatgacacc cagccgcacc accgaatcgt tcacccggca
      361 cagcgtctgg ttgtaccatt gatccgtgca ctcgtcgacc agagtctgta cgtcgaccac
      421 ctcgagcggg tcatagagga tgttgagatg agtcgcgtag ggatacgccg ccgagccacc
      481 gctaccttcc gccatgatgt cctaactcgt taaggggatg ctctaattct atcgcagtgg
      541 aggccgggcg gctgcatcct caagcgtatc caaacagcgg cgggaaggcg attgcgacga
      601 gggcggccca gatggcatag accggcaagt agtcggtctg ccactgctcc agagcggaga
      661 acgcgccgcg gcggcgaaga aaacgaagat acagcgctgc tgaccaggcc agattgacca
      721 gaagaatcac gttctcgccc agcgcggcaa cccggttcgg ggtgaagccg aattcggaga
      781 tgcgtgcggc gatggcccac agcgctaccg catccaccag cagcgcactc accagcagaa
      841 ccacctgcag cacatcgaag atgctgggag gtgactgggg gtcccgggcc gagatggaat
      901 agagcagcag cccgagcacc accacgagga gcaggtcgaa cccgatcagc acgttgcgct
      961 ggatgtcgat tccgcggccg gtccacacca cggtcgccag aaaggtgatc agcagggcgg
     1021 cgaacagagg cgtgaacagc ctggtcagta ccggagccat gttctcgatg acgctctgct
     1081 tggcctcaac cagccaggag gcgacgacga aggcgcctgc cgctccgcac ggcagcagcc
     1141 acgactggaa gaacggctcc gcgttgatcc cgatggcgcg gaagatcatc gccatgaacc
     1201 cggtgaacac gccgcccccg agggcgatca ggacgtagta gatgaacagc tcgccggtga
     1261 atcgaacgaa gtccatccgg cccgcagcct ggctccaacg gccgcccgcg tacgcgatcc
     1321 caaccaccag ccagagcgca atcggcaggt gcagcgccgt caatcgctcg gacgagcctc
     1381 ctgaggtgaa cggatagatg ttggcaaatg cgagtgccgc aaccaacgcc aggccgagcc
     1441 agcgcacggt gccggtttca agcccacgct tccagatgaa atacgcagtg aggaccggca
     1501 ggacaaagag actcaggttc cgggcataga agccgggcgc ccgcagaagg gagatcccga
//
LOCUS       DASRPQ010000597         1175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4142862, whole genome shotgun sequence.
ACCESSION   DASRPQ010000597 DASRPQ010000000
VERSION     DASRPQ010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4142862"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..930)
                     /locus_tag="VFD73_07040"
     CDS             complement(<1..930)
                     /locus_tag="VFD73_07040"
                     /inference="COORDINATES: protein motif:HMM:NF025042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4147 domain-containing protein"
                     /protein_id="HZI73773.1"
                     /translation="MANPHQLFNQRLLVDLYSAATAAVAPGPALQTRLARLPLDGSTP
                     VWIIALGKAAIPMAGAAVETLEAAGGRLGGGIVIGAGPAELVGQLRSLRGDHPEPGAG
                     SLAAAEALAQVVAEIPEHAQVWVLLSGGTTSLIGAPEPGLTPEELTALYGLLLGSGLD
                     ITAMNRIRKRFSRWGGGKLARALAPARTQVFIVSDVIGDDLSSIGSGPCVPDPTSARE
                     VRTLLEDSNLWPRIPESARRLLRSVESGLLPETPKPDDPIFQRVTSEIIASNRHALEA
                     AARRAQELGLEALLFDQLIQGEAAITGRQLARRL"
BASE COUNT          212 a          379 c          369 g          215 t
ORIGIN      
        1 aagccgtcgt gccagctgcc tgccggtgat tgccgcctct ccctggatca actgatcgaa
       61 cagcaacgcc tcgagaccca gctcctgtgc tcgtcgggcc gcggcctcga gtgcatgccg
      121 gttgctcgcg atgatttccg aggtgacgcg ttggaaaatg ggatcatccg gtttcggggt
      181 ttctgggagt aggccagact ccactgagcg gaggagccgg cgagctgact cggggattct
      241 aggccacaga ttggaatctt cgagcagggt gcggacctcc cttgcgctgg tcggatcggg
      301 cacgcacggc cccgaaccga tcgaggatag atcatccccg atcacgtccg atacgatgaa
      361 cacttgcgtc ctcgcgggcg ccaacgcccg cgcgagcttt cctccgcccc aacgagagaa
      421 gcgcttccgg attcggttca ttgcggtgat gtccaggccg gatccgagaa gaagcccata
      481 gagggcggtc aactcctcgg gggtaaggcc cggctccgga gcaccgatga ggctcgtcgt
      541 accgccggac aacagcaccc acacctgggc atgctctggg atttccgcga caacctgggc
      601 gagggcttcc gccgcagcca gagaaccggc tccgggctcg ggatgatctc ctctgagcga
      661 gcggagctga cctaccagct cggcgggtcc ggcaccgatc acgatgccgc cacccaaccg
      721 accaccagcc gcctccagcg tttccacggc cgcaccggcc attggtatgg cggccttgcc
      781 cagcgcaatg atccagaccg gggtcgaccc gtcgagcggg aggcgtgcga gccgggtctg
      841 cagcgcgggt cctggcgcaa ctgccgccgt tgccgcagag tagaggtcca ccagaagacg
      901 ctggttgaag agctggtggg ggttagccaa ttagatgtct tgtgaaaaag ttcacaaagt
      961 gttattggta tgagtcgcca ctgcagcccc gcccgtcgag cagcctggtt ctttgacctc
     1021 gagcgctggc tcttccgatt ggcaacgtcc tacccgtaat gagaggttct ccatggccgg
     1081 ccgcaacttt cttttcgtcc ccgggccaac caacgtgccc gatcgagttc tccgtgccat
     1141 gcaccgcgcg atggaagacc atcggtcgtc ggatt
//
LOCUS       DASRPQ010000598         6046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2589200, whole genome shotgun sequence.
ACCESSION   DASRPQ010000598 DASRPQ010000000
VERSION     DASRPQ010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6046
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2589200"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1256
                     /locus_tag="VFD73_07045"
     CDS             <1..1256
                     /locus_tag="VFD73_07045"
                     /inference="COORDINATES: protein motif:HMM:TIGR00924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HZI73774.1"
                     /translation="VFVGGVIIMSGHICLAIPSIATFYFGLVLIAVGTGLLKSNVSVL
                     VGKLYTPDDIRRDAGYSIYYMGINTGAFIAPFITGWLAQSDEFKRLLGSAGMNPETSW
                     HWGFGAAAVGMFFGLVQYILGGKHLSADGLHPIRPTEPKAAARVERQIRLVGAGVVVG
                     LLLLAVLVMTGAVSPDPEVISRNFGWVLIAVTVGFFAWLFLLGKWTPEERKRLVVITV
                     LFVAATVFWMAYEQAGSTLNLFADRSADNRVLGHSFPASWYQSLPPLFIITFAPVFAA
                     VWIRLGRRNPSSPAKFSIALVLLGLGFAVMIVAASIAATGTRVSPLWLVLSYLLQTLG
                     ELCLSPVGLSAISTLAPVRIAGLMMGIWFLALSVGNYLAGMASSFYEKIPLPKLFTIV
                     TLTALATALVLAILVRPIRRMLQRS"
     gene            complement(1277..1810)
                     /locus_tag="VFD73_07050"
     CDS             complement(1277..1810)
                     /locus_tag="VFD73_07050"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI73775.1"
                     /translation="MSGPILQTSRLDIFPLTADSIEALLQGRADRLRTLTNAEFPEPA
                     PPPYMAESLPVVLERLRSHPTEAEWWNWLVVLRNTREAVGSIALGGKPDPAGAVLVGY
                     AMYPGQEGRGYATESVREVMNWAFAQPGVRTVRALAPVWNTPAVHVAEKVGMRPIASN
                     EDDEVGEVLVYETSRQE"
     gene            complement(1829..2860)
                     /locus_tag="VFD73_07055"
     CDS             complement(1829..2860)
                     /locus_tag="VFD73_07055"
                     /inference="COORDINATES: protein motif:HMM:NF014386.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HZI73776.1"
                     /translation="MPDLSLPDILAALLGLSLNAYVLLGGADFGGGVWDMLASGPRRS
                     RQREVIAHAIGPIWEANHVWLILAIVLTFGCFPPVFARLGTVLHIPLTLMLVGIVLRG
                     SAFTFRTYDSQHDAAQRRWGRIFASASVITPVLLGISIGAVASGRVGGELQGGFTQRF
                     VDPWCTPFSIGVGLLTLSLFAFLAAVFLTLETRDRDLSEDFRRRALACGVFVFFASAL
                     VLLLSHRTAPLVRSGLMASSWALPLHLLTGVSAVTVLAALWFRRYRLARVAVGLQVSL
                     IFWGWAMAQYPFLLPPNFTVSNSAAEASTLRLTLIALLVGAVILLPSLWYLFQIFKTV
                     PADPGERTI"
     gene            complement(2853..4196)
                     /locus_tag="VFD73_07060"
     CDS             complement(2853..4196)
                     /locus_tag="VFD73_07060"
                     /inference="COORDINATES: protein motif:HMM:NF013791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HZI73777.1"
                     /translation="MSDLLAARSQMAVSLGFHIIFAVVGIGMPVLMVIAERRWQKTGD
                     AIHLDLAKRWAKGTAILFAVGAVSGTVLSFELGLLWPQFMALAGGIVGMPFSLEGFAF
                     FTEAIFLGIYLYGWDRISPKAHLWAGIAVAVSGAASGIFVVMANSWMNSPTGFELVGG
                     RPVNVDPIAAMLNPMAFQQTLHMTIAAYAATGFAVAGIHAFLLLFDRTNAFHRRALTA
                     ALVLGGPAAVLQPISGDISARSVAARQPVKLAAMESLFETTASAPLTIGGFPDLRAGE
                     TRYAIKIPYGLSLLAFHDPHAVVKGLNEFPREDWPNVPIVHTAFQLMVGLGTYLALVS
                     LWVGWVALRRRDLTSNRWLLRAVAFGAPLGFIAIEAGWTVTEVGRQPWIITGVLRTAD
                     AVTPMPGLVVPFLLFTVLYCFLGGIVAWLLYHQIIRSPRSSEWSRVYSPPVLHRA"
     gene            4314..5792
                     /locus_tag="VFD73_07065"
     CDS             4314..5792
                     /locus_tag="VFD73_07065"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI73778.1"
                     /translation="MTQRLSGSRPNLACFAVFAILAAPVGLVAQSGGGSGKVPITTAS
                     SEARQQYLQGRTLGENLRAYDARQILLQAAAKDPNFALAHYSLAQNAGSAKDFFEHLK
                     HAVALSGKASKGERLMILGLQAGANADTKLQRDYYEQLVAAYPRDERAHFLLGNAYFG
                     QQNYEQAVGEYHKAVELAPTYAPAYNLLGYAERARERYGDAESAFKKYIELIPNDPNP
                     YDSYAELLMKMGRFDESIAMYRKALATDSNFSNSRFGVASNLMFLGKHDEARKELTEL
                     QERARNDGDRRLAFFATAVTYADQGSYDRAAEELQQEYGVAEKAGDNAAMAADVTAIG
                     DVLLEAGKPDRARERYEQALRLQERSDLPAEVKANARLVHHYNLGRVALATHDVAGAK
                     QHADTFLQGATAKKNDAQIRLGHELLGAIALEEKQFARATAELNQGNQQDPYTLYRLG
                     QASQGNGDGGKAAEYFRRAADQNTLPTLNLAFVRTKTRKAKV"
     gene            complement(5849..>6046)
                     /locus_tag="VFD73_07070"
     CDS             complement(5849..>6046)
                     /locus_tag="VFD73_07070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73779.1"
                     /translation="LWIGGCRLRIAGETRPCERMDEALPGLRKLMALDWGGGVFAEVL
                     DGGDIAVGDEVRWEAEVSVVV"
BASE COUNT         1252 a         1866 c         1884 g         1044 t
ORIGIN      
        1 cggtgttcgt tggcggcgtc atcatcatgt ccggacatat ctgcctggcc atcccgtcga
       61 tcgccacctt ctacttcggt ctggtactga tcgcggtagg gactgggctg ctgaagtcga
      121 acgtgagtgt cctggtcggg aagctctata ctccggacga catccggcgg gatgccgggt
      181 actcgatcta ttacatgggg atcaacaccg gagcgttcat tgcgccgttc atcaccggct
      241 ggttggcgca gagcgatgag ttcaagcggc ttctcggctc agcggggatg aatccggaga
      301 cgtcatggca ttgggggttc ggtgcggcgg cggtcggtat gttcttcggc ctggtccagt
      361 atatcctggg cggaaagcac ctgtcggccg acgggctgca tccgattcgc ccgacggaac
      421 cgaaggccgc ggccagggtc gagcgacaga tacggctggt cggcgccggc gtcgtcgttg
      481 gcttgctgct tctggccgtg ttggtgatga ccggtgccgt atcgcccgat ccagaggtga
      541 tctctcgcaa tttcggctgg gtgctgatcg cggtcaccgt gggctttttc gcctggcttt
      601 tcctgctagg caaatggact ccggaagaac gcaagagact ggtcgtcatt accgtgctgt
      661 tcgtggcggc gacagtgttc tggatggcgt acgagcaggc aggatctacc ctcaacctct
      721 tcgccgatcg cagtgccgac aaccgtgtcc tgggacatag cttcccggcg agctggtatc
      781 aatccttgcc accgctcttt atcatcacct tcgctccggt ctttgccgct gtgtggatcc
      841 gcctgggcag acgaaatccc tccagcccag ccaagttttc catcgcgctc gtgttgctcg
      901 ggctcggctt cgcggtcatg atcgtggccg ccagcattgc cgcaaccggc acccgggtca
      961 gtccgctctg gctggtgctc tcctatctat tgcagacatt gggcgagctc tgcctcagtc
     1021 cggtgggact cagcgcgatc agtaccctgg caccggttcg gattgccggc ttgatgatgg
     1081 gaatctggtt tttggcgctt tccgtcggga actatctcgc gggtatggct tccagtttct
     1141 atgagaagat tccgctgccg aaactgttta ccatcgtgac cctcacagcc ctagcaacgg
     1201 cgctagtgct ggccatcctg gtgagaccta tccgccgaat gctgcagcga tcgtaaagca
     1261 gcgccgccaa ccgacatcat tcctgacggc tggtctcgta caccagcacc tctcccacct
     1321 cgtcatcctc gttcgaggcg atcgggcgca tgcccacctt ttccgccacg tgcacggccg
     1381 gtgtgttcca gaccggtgcg agcgcacgga cggtgcggac tccgggctgg gcaaacgccc
     1441 agttcatcac ttcgcgaact gactccgtgg cgtagccccg gccttcctgg ccgggataca
     1501 tggcgtatcc caccagtacc gcgccggcgg gatcgggttt ccccccaagc gcaatcgagc
     1561 cgacggcttc gcgcgtgttc cgcaacacga cgagccaatt ccaccactcc gcctcggtgg
     1621 gatggctccg gagccgttcc aaaacaaccg gaagtgactc ggccatgtag ggtggtgggg
     1681 ccggctccgg gaactcggca ttggtgaggg tccgcaagcg atcggcccgg ccctgcagca
     1741 atgcttcgat ggaatcggcg gttaacggaa aaatgtcgag tcgagacgtt tgcagtattg
     1801 ggccgctcat ccgaacgcct cgcatggctc agatcgtgcg ctcacctgga tctgccggga
     1861 cggtcttgaa gatctgaaac agataccaga gcgaaggaag taggataact gctccaacca
     1921 gtaatgcgat caaggtcaaa cgcaacgtgg acgcctcggc tgccgaattg ctgacggtaa
     1981 agttgggcgg cagcagaaat gggtactgcg ccattgccca cccccagaaa atcaacgaga
     2041 cctgaagccc gacagcgacg cgcgccagac ggtaacgcct gaaccagaga gcggccagga
     2101 cagtcaccgc actcacaccg gtgagcaggt gcagaggcag ggcccacgag gaggccatca
     2161 ggccgctccg caccagcggc gccgttcggt gtgacagcag cagaaccaga gccgacgcaa
     2221 agaacacaaa cactccgcag gcaagcgctc ggcggcggaa gtcctcactc aggtctcggt
     2281 cccgggtctc cagtgtcagg aaaacagccg ccaaaaacgc aaagaggctc agcgtgagca
     2341 gcccaacgcc gatggagaac ggggtacacc acggatccac gaaacgctgg gtgaacccgc
     2401 cctgcagctc cccgccgact cggcccgagg cgacggctcc gatggaaatg ccgagcagga
     2461 ctggagtgat gacgctggcg ctggcaaaaa tccgtcccca gcggcgctgg gcggcatcgt
     2521 gttggctatc gtaggttcga aaggtgaacg cggaaccacg gaggacgatc cccaccaaca
     2581 tcaacgtcaa cggaatgtgg aggaccgtac cgagcctggc aaacaccggt ggaaagcagc
     2641 caaaggtgag gacaatggca aggatcagcc agacgtggtt ggcttcccag atggggccga
     2701 tcgcatgagc gatgacttcg cgctgccggc ttcggcgggg gccgctcgcc agcatgtccc
     2761 acacaccgcc gccgaagtcc gcgccgccga gcagtacgta cgcgttgagc gaaagcccca
     2821 gcagtgcagc caggatgtcc ggcaggctca ggtcaggcac gatgcaacac cggtggcgag
     2881 tacacccgac tccactcact ggatcgcggg cttcgaataa tctgatggta gagcagccag
     2941 gcaacgatcc cgccgaggaa gcagtacaag acggtgaaga gaagaaacgg aaccacgagt
     3001 cccggcattg gtgttacggc atcggctgtg cgcaatactc cggtgatgat ccagggctgg
     3061 cgccccactt ccgttaccgt ccatcctgcc tcgatggcga tgaatcccag cggcgcccca
     3121 aaggcgaccg cgcgcaagag ccaacggttg ctggtcagat cgcggcgccg cagcgcgacc
     3181 catccgaccc acagtgatac gagtgccaga taagtcccta ggcccaccat cagttgaaag
     3241 gcggtgtgca cgatcggcac gttgggccag tcttcccggg ggaactcgtt gagtcccttg
     3301 acgaccgcgt gagggtcatg gaatgcgagc agggagagcc catacggaat cttgatcgca
     3361 tagcgagtct caccagcacg cagatcggga aagccgccga tcgtgagggg agcgctcgcg
     3421 gtggtctcga agagggactc catggcggca agcttcaccg gttgccgtgc cgcgacggag
     3481 cgggcgctga tgtctcccga gatcggttgg agcactgcgg ccgggcctcc aaggaccaac
     3541 gctgccgtca gcgcgcgacg atggaatgcg ttggtgcggt cgaacaggag caggaaggcg
     3601 tgaatcccag cgaccgcaaa gccagtcgcg gcgtatgcgg cgatggtcat gtgtaaggtc
     3661 tgctgaaagg ccatgggatt cagcatggcc gcgatgggat cgacattcac cggccggccg
     3721 cccaccaatt cgaagccagt cggcgagttc atccaggagt ttgccatcac cacgaaaatt
     3781 cccgatgccg ctccgctgac tgccacggct atgccggccc agaggtgggc tttgggagag
     3841 attcgatccc acccgtagag atagatcccc aggaatatcg cctcggtaaa aaaggcgaat
     3901 ccctcgagtg aaaacggcat gccgacgatg ccgccggcca gggccatgaa ctgcggccag
     3961 aggaggccca gctcaaatga cagcacggta ccggagacgg cgccgacggc aaacaggatc
     4021 gccgtcccct tggcccaacg tttggccaga tccagatgga tcgcgtcgcc ggtcttttgc
     4081 catcgccgtt cggcgatgac catcaacacc ggcatcccga tgccgacgac cgcaaagatg
     4141 atgtggaagc cgagagacac ggccatctgg gatcgtgcgg cgaggagatc ggacatgggg
     4201 gaaggtattc gggcgctgaa tctttttgaa agacccctca gtagagcctc aaggggagcg
     4261 acgaccgagc tcagctcgca cgccccatga ctcagctcac atctggaggt ttcatgacgc
     4321 aacgactaag cggatcgcgc ccgaatctcg cctgttttgc agtgttcgcc atccttgcag
     4381 caccggttgg actggtcgca cagagcggcg gcggatcagg caaggtccct atcacgaccg
     4441 cgtcctctga ggccaggcag cagtatctgc aaggccgcac cctgggagaa aacctcaggg
     4501 cttatgacgc ccggcaaatt cttttgcagg ccgcggccaa ggatcccaat tttgcgctcg
     4561 cccactacag cctggcccag aacgccggaa gcgccaagga cttcttcgag catctcaagc
     4621 acgccgtcgc gctctcggga aaagcctcca aaggcgagcg gctgatgatc ctgggactcc
     4681 aggctggtgc caacgccgac accaagctgc aacgcgacta ttacgaacag ctcgtggccg
     4741 cgtatccgag agatgaacgc gctcacttcc tgttgggcaa cgcctacttc ggacagcaga
     4801 attacgagca ggcagtgggc gagtatcaca aggcggtcga attggccccc acctatgctc
     4861 ctgcgtacaa cctcttggga tacgccgagc gggccagaga gcggtatggt gacgcggagt
     4921 ctgcattcaa gaagtacatc gagctgattc ccaacgaccc caatccttac gattcctacg
     4981 ccgaactgct catgaagatg ggccgctttg acgagtcgat cgcgatgtac cgaaaggctc
     5041 tcgcaaccga ctccaacttt tcgaactcgc gctttggcgt ggccagcaac ttgatgtttc
     5101 taggcaagca cgatgaagca cgcaaggaac tgacagaact gcaggagcgt gcccggaatg
     5161 acggagaccg ccgcctcgcg ttcttcgcca cggcggtgac gtatgcggat cagggcagct
     5221 acgatcgagc ggcagaggag ctgcagcagg agtacggcgt ggcagagaag gccggggata
     5281 acgccgcgat ggctgccgat gttacggcga tcggcgacgt gctgctcgag gccggcaagc
     5341 cagaccgggc acgggagcgg tatgagcagg cgcttcggct ccaggagcgc tccgatcttc
     5401 cggcggaggt caaggccaat gcccgtctgg tacaccacta caatctgggc cgggtggcac
     5461 tcgccaccca tgatgtcgcc ggggcaaaac agcacgccga cacctttctg cagggcgcaa
     5521 cggccaagaa gaacgatgcc cagatccggc tcgggcacga gttgctggga gccattgcgc
     5581 tggaggagaa gcaattcgcc cgggccacgg cagagctgaa tcagggaaat cagcaggatc
     5641 cctataccct gtaccgcctg gggcaggcgt ctcaggggaa tggagacggg ggcaaagcgg
     5701 ccgagtactt tcgccgggca gccgaccaga acacgctgcc caccctaaac ctggcctttg
     5761 tcaggaccaa aaccaggaag gcgaaggtct gagcgatgca acgaggcggg acgcgagagc
     5821 gtcccgcctg gccgctcaca ccgcgccatt acacaacgac tgatacttct gcttcccagc
     5881 ggacctcgtc gcctacggcg atgtcaccgc cgtcgaggac ttccgcgaat accccaccgc
     5941 cccagtccag ggccataagt ttccggagtc cggggagtgc ttcatccatt cgctcgcatg
     6001 gcctggtctc acccgcgatc cggaggcggc acccgccgat ccagag
//
LOCUS       DASRPQ010000599         1536 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3211819, whole genome shotgun sequence.
ACCESSION   DASRPQ010000599 DASRPQ010000000
VERSION     DASRPQ010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3211819"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..483)
                     /locus_tag="VFD73_07075"
     CDS             complement(1..483)
                     /locus_tag="VFD73_07075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73780.1"
                     /translation="MRQAFLVLSAMLCLACSRERAGNASASAYTSDADSTAREEGMAG
                     TNSGSELQAPRLIPAIQNQLNLMANGTQPPSTTNLTAYKNMAGDLVNSMIADLYRAGY
                     ADSGRFRALGDSVLEDLGGGAGTPPKIDRAKLPQHVDRMQRLIRSYQRTMKAAAEQQQ
                     "
     gene            complement(578..>1536)
                     /locus_tag="VFD73_07080"
     CDS             complement(578..>1536)
                     /locus_tag="VFD73_07080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73781.1"
                     /translation="AIPKSRSATELDMLGLILALGLAPPQLGTAPFRPAPVPPLQFIQ
                     SALHQHQIVFLGDIHPFAEPKLLVTHLIREQGAENQIDLLALEVGSDQQEWVDRYLNS
                     VPEDTTILLTHPRTLRAHWGISAEYLDIYRAAYQWNHAHPEHHLHVLAADLIGWPIAP
                     LTAHMATGGFVNRDIWMAAAFRKTMQQHPHWRVLIFMGGYHGLKEVGGQVAMGRVHDR
                     FDRWFAGYLTDAGLQVYTILTDAEMQNSRPATRAFEQLARDSARNFIEPLDSTTDDIK
                     EPLYDVEQEGFELEFWPSRFPLRKAVDAMLVLNHSTPITLLQ"
BASE COUNT          295 a          447 c          479 g          315 t
ORIGIN      
        1 ctattgttgc tgctcagccg cggccttcat tgtccgctgg taactacgga tcagtcgctg
       61 catgcggtcc acgtgctgcg gaagcttggc ccggtcaatc ttcggagggg ttccagcacc
      121 cccacccaag tcctccagaa ccgaatcgcc gagggcccgg aaccggcctg agtcggcgta
      181 tccagcgcga tagaggtccg caatcatcga gttgaccaga tcgccggcca tgttcttata
      241 tgccgtcagg ttcgttgtgc tcggcggctg ggtgccgttg gccatgagat tcagctgatt
      301 ctgaatggcg ggtatgagcc gaggtgcttg cagctccgat ccactgttgg tgcctgccat
      361 gccttcttcc cgggcagtgc tgtcggcgtc ggaagtatag gctgaagccg aggcattgcc
      421 tgcccgctcg cggctgcagg ccaggcagag catagcgctg agcactaaga aggcttgtct
      481 catgtgaact ccttcggacc agggaatcac gcctagccaa tcaattgatc ccgcccagtg
      541 cactccgtgt cggaggtcac gcccggtcag gcgcctctta ttgcagaaga gtgattgggg
      601 tggaatggtt gagaaccagc attgcatcga cggctttccg aagcgggaag cgggagggcc
      661 agaactcgag ctcaaatccc tcctgctcaa catcgtaaag cggctccttg atgtcatcgg
      721 tcgtcgagtc cagcggctcg atgaaattcc gggccgagtc tcgggccagc tgctcaaagg
      781 ctctggtggc tggacgtgag ttttgcattt ccgcatcggt cagaatggta tacacctgga
      841 gtcccgcatc ggtcaggtat ccggcaaacc atcgatcaaa ccggtcatgg acccggccca
      901 tagctacttg cccgccgacc tccttcaggc cgtgataccc ccccatgaag atcaggacgc
      961 gccaatgggg gtgctgctgc atggttttgc gaaaggcggc cgccatccag atatcccggt
     1021 ttacaaatcc gccggtggcc atgtgcgcag taagcggtgc aatcggccag cctatgagat
     1081 cggcggccag gacgtgcagg tgatgctcgg gatgggcgtg attccactga tacgccgccc
     1141 ggtagatatc caaatactcc gcgctgatgc cccagtgcgc acgcagagtc cgggggtgag
     1201 tcaacaagat tgtggtgtcc tcaggcactg agttgagata gcggtccacc cactcttgct
     1261 ggtccgaacc tacttcgagg gccagcagat cgatctggtt ctccgcgccc tgctcccgga
     1321 tcagatgtgt caccagcagc ttcggctcgg cgaacggatg aatgtctccc agaaacacga
     1381 tctgatgttg gtgcagtgcg gattggatga actgcagggg tggcactggg gcggggcgaa
     1441 agggagcagt gccaagctgg ggaggcgcca ggccgagggc caggatcaat ccaagcatgt
     1501 cgagctccgt ggcgctccgt gacttcggaa tcgctc
//
LOCUS       DASRPQ010000600         1173 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_69260, whole genome shotgun sequence.
ACCESSION   DASRPQ010000600 DASRPQ010000000
VERSION     DASRPQ010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69260"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..583
                     /locus_tag="VFD73_07085"
     CDS             <1..583
                     /locus_tag="VFD73_07085"
                     /inference="COORDINATES: protein motif:HMM:NF012434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate dehydrogenase"
                     /protein_id="HZI73782.1"
                     /translation="SVAAHLLDSAQAVVIAASDSTVALYNRHGLDIPKLMMHKERTGT
                     LRGFPGAEIITPEELLAMDCEVLIPAALENAITEANAHTIHARIVSEAANGPVTPEAD
                     RILDQKGVFLIPDILCNAGGVTVSYFEWVQDENHLFWDEQDVNKKLEKIMTRSFSDVL
                     KIRQERKVSMRLAANMLGVGRVAEACKLRGLYP"
     gene            complement(600..>1173)
                     /locus_tag="VFD73_07090"
     CDS             complement(600..>1173)
                     /locus_tag="VFD73_07090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73783.1"
                     /translation="KEEYIKLWCLWNRADVPPFDAVFPEVDGFGVAPLSCTIVNQWLV
                     VSIRVPPGLRPGRHEGRIKIGEFGWSQPREFYLDLPSIASNLELRAIQDSISWRTGEV
                     DWANGGWLTLWADGLSPEADPGNTLVEIAGVPHVPEAVEPLKGQVNIRLRPLIRAGEH
                     EVGLLHRGAESRLPLLVKGEAPRIRGLQSL"
BASE COUNT          235 a          357 c          378 g          203 t
ORIGIN      
        1 ttccgtggca gcgcacctgc tcgacagcgc gcaggctgtt gtgatcgcgg ccagcgattc
       61 cacggtcgct ctgtacaacc gtcacggcct ggacatcccg aagctcatga tgcacaagga
      121 gcgcaccggc acgctgcgag gcttcccggg agccgagatc atcacaccgg aagagctgct
      181 ggcgatggat tgcgaggtgc tgatcccggc ggcattggaa aatgccatca ccgaggcgaa
      241 tgcccacacg atccatgcgc gcattgtgtc ggaagcggcc aatggacctg ttacgccgga
      301 ggccgatcgc atcctggatc agaagggcgt attcctgatt ccggacattc tatgcaatgc
      361 gggcggagtg acggtgtcgt acttcgaatg ggtgcaggac gagaaccacc tgttctggga
      421 cgaacaggac gtcaacaaga agctcgagaa gatcatgacc cggtcgttca gcgacgtgct
      481 gaagattcgc caggagcgga aggtgagtat gcggctggcg gcgaatatgc tgggcgtggg
      541 cagagtggcg gaggcgtgca agctccgcgg gctgtatccg tgaagctcgg ccaccgatcc
      601 taaaggctct gcaggcctcg aattcgcgga gcctcgcctt tcaccagcag cggaagcctg
      661 gactcagcgc cccgatggag caggcccact tcgtgttcac ccgcgcggat taacggccgc
      721 aggcgtatgt tgacctgacc cttcagcggt tccactgctt ccggcacatg tgggacgccg
      781 gcgatctcta ccaaggtatt acccgggtcg gcctcgggtg agaggccgtc cgcccacaag
      841 gtaagccagc cgccgttggc ccaatcgacc tcaccggtcc gccacgagat ggagtcctga
      901 atggcacgca gttccaggtt gctggcgata gacggcaggt cgaggtagaa ctcgcgtggc
      961 tgggaccatc caaactcgcc gattttgatg cgtccttcgt ggcggcccgg ccgcaggccc
     1021 ggcgggacgc ggatgctgac caccagccac tgattgacga tcgtgcagga gagcggcgcc
     1081 acgccgaagc catccacctc cggaaacacc gcgtcgaaag gcggcacatc ggcgcgattc
     1141 caaaggcacc agagcttgat gtactcctct ttg
//
LOCUS       DASRPQ010000601         2104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3835047, whole genome shotgun sequence.
ACCESSION   DASRPQ010000601 DASRPQ010000000
VERSION     DASRPQ010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3835047"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..446
                     /locus_tag="VFD73_07095"
     CDS             <1..446
                     /locus_tag="VFD73_07095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73784.1"
                     /translation="FARISQPSLTVDGRRAPGLRFGDPRAQALAGALANMLCAVTGIT
                     NKSLRALMTGLLGTAYSMNQASYDLTRLCRNGLITRMPHRNLYVLTPDGLRFAIFYTK
                     VHDRILRPLMACDQPQASPPLRAALRTIDTEVSRRIAAARLPAAA"
     gene            826..1527
                     /locus_tag="VFD73_07100"
     CDS             826..1527
                     /locus_tag="VFD73_07100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HZI73785.1"
                     /translation="MSLLDVSVEAGDLGPVIVLAGDADSSSVTHLNEVLTAQASGRTR
                     HLTIDATNLRSIVPATAQTLMLAAPIVMVRGGSTVLVNPQEPVLKMLNHTRATEMFTI
                     QSRTPARPANEGRRPVPVTDHEQEPDWPVTLRRQPGSLSTGHAEGDTSMFEIICRQCG
                     DDPALDLREVSAELQQLRGLYTLSDGIAAFTRHNEVHNGPGEMQPVAIDLAQRPGRPV
                     LRPDRYQRLPGGMEV"
     gene            1534..1857
                     /locus_tag="VFD73_07105"
     CDS             1534..1857
                     /locus_tag="VFD73_07105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73786.1"
                     /translation="MRWHRSFLAAVGQRLQQLGLRACPVCGRADSLRVSPFPVLLTDA
                     GPVPSAAAPAPAQEYVDDITAAVKAECAVCGHWMLFDSLKFRTGQERIVLFEADEEEQ
                     RHPDE"
BASE COUNT          412 a          724 c          640 g          328 t
ORIGIN      
        1 cctttgcgcg gatatcgcag ccgtccctca ccgtggacgg ccggagggcc ccaggactac
       61 ggttcggcga ccctcgagcg caggccctgg ccggcgccct ggccaacatg ctgtgcgccg
      121 tcaccggcat caccaacaag agcctgcgcg ccttgatgac cggcctgctc ggcaccgcct
      181 acagcatgaa ccaggcctcc tacgatctga cccgcttgtg ccgcaacggc ctgatcaccc
      241 gcatgccgca ccgcaacctg tatgtcctga cccccgacgg cctgcgattc gcgatcttct
      301 acaccaaggt ccacgaccgc atcttgcggc cgctcatggc gtgcgaccag cctcaggcgt
      361 cgcccccact tcgcgccgcc ctgcgcacca tcgacaccga ggtctcccgg cggatcgccg
      421 cagcacgcct gccagccgct gcatgaccgc agcaacaact atcaaaagct acaaaccagg
      481 cccggaaact caagtcagct gtcagagtcc tcaaaaacca agcgcggcta gacggggacg
      541 aggtggggtc tagcttctga gcctcgcaag ctgagtacac cgccgaccta aggaccccgc
      601 agccgtgact agcgtccccc gcggaggttt ctgtcacccc cgcggacctg acggcgaggg
      661 tcagggcggg cccgaagggc gcggcgaacc ttctcgctgc tgagaatggg cagcgctaaa
      721 cccctacccg ggagatcacc cagcacgggt cccggctacc cttataaaac catattaaat
      781 ctcactaaac gggtagccgg agaggttggc cgaagaggtg cgggtgtgag tctgctggac
      841 gtatccgtcg aggccgggga cctcggcccg gtcatcgtcc tggctggcga tgcggacagc
      901 tcatccgtca cgcacctgaa cgaagtactc accgcccagg catcaggccg gaccaggcac
      961 ctgaccatcg acgcaacgaa cctgcgctcc atcgttccgg caacggcaca gacgctgatg
     1021 ctggctgcac cgatcgtcat ggtccggggc ggcagcacgg tgctggtgaa cccgcaggag
     1081 cccgtactga agatgctgaa ccacacacgc gcaaccgaga tgttcacgat ccagagccgg
     1141 acgccagcgc ggccagcgaa cgagggacgg agacccgtgc cagtgactga ccacgagcag
     1201 gagccggact ggccagtcac gctccggcgc cagccaggca gtctcagcac cggccacgca
     1261 gaaggcgaca ccagcatgtt cgaaatcatc tgccgccagt gtggtgacga tcccgcgctg
     1321 gatcttcggg aggtttcagc ggagctccag cagctccgcg gactctacac gcttagtgac
     1381 ggcatcgccg cgtttaccag gcacaacgag gtccacaacg gacccggcga gatgcagccg
     1441 gtcgcaattg atcttgctca gaggcctgga cgtccggtgt tgaggcccga ccggtaccag
     1501 cgcctgcctg gcggcatgga ggtatgacgg cgaatgcgat ggcaccgcag tttcctggcc
     1561 gccgtcggcc agaggctgca gcagctcggc ctgcgggcct gcccggtgtg cggccgggcg
     1621 gactcactgc gcgtcagccc ctttcccgtc ctgctgaccg atgccgggcc agtccccagc
     1681 gctgccgcac ccgccccggc gcaggagtac gtcgatgaca ttaccgctgc cgtcaaagcc
     1741 gaatgcgccg tgtgcggcca ctggatgttg ttcgactccc tgaagttccg taccgggcag
     1801 gaaagaatcg tgcttttcga ggcggatgag gaagaacaac gtcaccctga cgaataacca
     1861 ggctccaggg tttctctcga tcttccagct aggcgcctgg caaccagccg cgtccggaga
     1921 cgtgagcagt atcgaggtca gcaccggaca tggagtgaag tccgaagccg tgattggtcc
     1981 ggagcccgaa tcgatcacag tctgccaacg tcttctggca ggctggacgg ttgcgttaac
     2041 aaacagttaa agtcgcctca cggttgtcga gccagcagac ccgaggctcc cgaacggcct
     2101 gctc
//
LOCUS       DASRPQ010000602         3777 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_386013, whole genome shotgun sequence.
ACCESSION   DASRPQ010000602 DASRPQ010000000
VERSION     DASRPQ010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3777
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_386013"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1136
                     /locus_tag="VFD73_07110"
     CDS             <1..1136
                     /locus_tag="VFD73_07110"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:NF012532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HZI73787.1"
                     /translation="PAIMRELLAIPLVRRSVRSQGGVQEVMIGYSDSNKDGGFLTSNW
                     ELSKAQIKLTRVGKEAGIPISFFHGRGGSVSRGGAPTGRAIAAQPAGSIQGRMRITEQ
                     GEVVSFKYANRGTAQYQLELLAASVVEHTLKSEGEKALVPTAEFDEAMEALSGAAQAS
                     YRQLIDHPDLLPYYQAASPLEEISLLNLGSRPARRFGARSLNDLRAIPWVFAWSQNRH
                     FVPGWYGVGSGILTFLEVRGRRGAALLDRMFAESRLFRLIVDEVEKTLTYVDLDIARE
                     YAELVPDAAARATILGMVEEEYHRTVEAVLRISGGHELVERYPRFRRRLARRLPTINQ
                     VSRQQIELLRRFRESGSDKSQEEQLSALLLSINTIAAGFGATG"
     gene            complement(1141..2220)
                     /gene="rlmN"
                     /locus_tag="VFD73_07115"
     CDS             complement(1141..2220)
                     /gene="rlmN"
                     /locus_tag="VFD73_07115"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: protein motif:HMM:TIGR00048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HZI73788.1"
                     /translation="MPTHPVPVTPIAQNLLDLPPDSAREEVARWVQERKLPAYRTDQI
                     VRRLWNAPIANWRDATDLPLSLREELGTSFPLSRLALEVQQQSADGTRKYLWRLEDGE
                     AIESVLIPSSGRRTLCISSQAGCALGCTFCATGRMGFRRNLSAFEIAGQVREIVLENA
                     EDKPTNVVFMGMGEPLLNWPSVNTTLSILNGSLGFGIGARHITVSTVGILPGLAEFAK
                     RPEQFRLAISLHAPTSEQRLGIMPIEKKYDLEAVIRAAEAFRRRVTFEYVMIGGVNDS
                     DADAGRLAKLARRLGALVNILPLHPGGAPGLTPTTSGRIKGFAERLRNQGIEATVRRS
                     RGLDIDAACGQLRVEVEKRRRRQKA"
     gene            2361..2819
                     /locus_tag="VFD73_07120"
     CDS             2361..2819
                     /locus_tag="VFD73_07120"
                     /inference="COORDINATES: protein motif:HMM:NF012579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HZI73789.1"
                     /translation="MLLTELLTPDRVVVPLTARDKAGVIAELTRHLVARSGGDYTQVL
                     EAVEERENVLSTGIGLGVAIPHARSSAVRELSIVCGLSPVPVPYDSIDGDPVRLFFLI
                     VGPETTAGQHVKILSRIARLVRRDHLRQQLCEADTADQLYAVLLDAEEQA"
     gene            2819..>3777
                     /gene="aspS"
                     /locus_tag="VFD73_07125"
     CDS             2819..>3777
                     /gene="aspS"
                     /locus_tag="VFD73_07125"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: protein motif:HMM:NF001750.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HZI73790.1"
                     /translation="MGATALRTHRAGSLTREQLGQEVRLGGWVHRRRDLGGLVFIDLR
                     DRAGLVQLSFNPEWTSPEVMERAAGLGAETVVLVAGTVALRPQPSRDSQLISREVEVH
                     VSGLEVVGPAQTPPIPVALKEKEDLPAEELRLRHRVLDLRRPELHRNLILRHRLMQAT
                     RRYFDQHGFLEIETPILTKPTPEGARDYLVPSRVHPGEFFALPQSPQLYKQLLMVAGL
                     DRYFQIARCFRDEDLRADRQPEFTQIDIEASFVGIEDVLSFGEGLVHTLWKEAGHSLS
                     LPIPRMRHADALERFGTDKPDLRFGLEIFDATEVFRSAEFSVTR"
BASE COUNT          683 a         1167 c         1199 g          728 t
ORIGIN      
        1 cgcccgcgat catgcgggag ctcctggcca ttccgctggt gcgccggagt gttcggagcc
       61 agggcggggt acaggaggtg atgatcggct actccgactc caacaaggac ggaggatttc
      121 tcacctcgaa ctgggagttg agcaaagccc agatcaagct gaccagggta gggaaggaag
      181 ccggcatccc gatctctttt ttccacggtc gaggtgggtc ggtcagccga ggcggcgccc
      241 cgaccggtcg cgctattgcg gctcagcctg ccggctcaat ccaggggcgc atgcggatta
      301 ccgagcaggg ggaagtggtc tcattcaagt acgcgaaccg gggcactgcg cagtatcagc
      361 tggagctgct ggcggccagt gtggtggagc acaccctcaa gtcggaaggc gaaaaagcgc
      421 tggtccccac tgcggagttc gacgaagcaa tggaggcgct ctcgggcgct gcccaggcat
      481 cgtatcgtca gttgattgat catccggatc tgctgccgta ttaccaggca gcaagtcccc
      541 tggaggaaat ctcactcctc aacctcggct cccgtcctgc ccggcgcttc ggtgcccgct
      601 cactcaacga tcttcgcgcc attccctggg tgtttgcctg gtcccagaac cgacacttcg
      661 tgcctggctg gtacggtgtc ggcagcggaa ttctgacgtt tctggaggtg cgtggccgcc
      721 gcggagctgc actgctggac cggatgttcg ccgagtccag gttgttccgg ttaatcgtgg
      781 atgaagtcga aaagaccctg acgtatgtcg atctcgacat cgcgcgggag tacgccgagc
      841 tggtccccga cgcggcggcc agggcaacga ttctgggaat ggtcgaagag gagtaccatc
      901 gcaccgtgga ggcggtgctc cggatcagtg gcgggcatga gctggtagag cggtatcccc
      961 gctttcgtcg gcgactcgcc cgccggttgc cgacgatcaa tcaagtaagc cgccagcaga
     1021 tcgagctgtt gcgccgcttt cgtgagtcgg gcagcgacaa gagccaggag gagcagttgt
     1081 cggcactgct gctttcgatc aacacgatag ctgccggctt tggggcgaca gggtgaaggc
     1141 ttacgccttt tgtctcctgc gccttttctc aacctcaacc cggagttgcc cgcacgccgc
     1201 gtcgatgtcc aggccgcggc tccgccttac cgttgcctcg atgccctgat tgcgcaatcg
     1261 ctcggcgaag cccttgatcc tacctgaggt cgttggtgtg aggccgggtg ctccgccggg
     1321 atgcaatgga agaatgttga ccaaggctcc cagtctgcga gccagcttgg ccaaccggcc
     1381 cgcatccgca tcgctgtcgt tgactccacc tatcatcaca tactcgaatg tcacccgcct
     1441 gcgaaacgcc tcggccgctc ggatgaccgc ctccaggtca tacttcttct cgatcggcat
     1501 gatcccgagc cgctgctccg aggtcggcgc gtgaagcgaa atggccagac gaaactgctc
     1561 cggtcgcttg gcgaattccg cgagacccgg aagaatcccc actgtcgaca ccgtaatgtg
     1621 ccgggcgcca attccgaagc cgaggctgcc gttcaaaatg ctcagggtcg tattcactga
     1681 cggccagttg agtagcggct cacccatccc catgaagaca acgttggtgg gcttatcctc
     1741 cgcgttctcc agaacgattt cccggacctg acctgcgatc tcgaaggcgc tgagattgcg
     1801 ccgaaagccc atgcggcccg tcgcacaaaa ggtgcagccc agagcacagc ctgcttgaga
     1861 cgagatgcag agggtgcgcc gaccactgga tggaatgagc accgactcga tagcttcgcc
     1921 gtcctcaagg cgccagagat actttcgggt accgtcagcc gattgctgtt gcacctcgag
     1981 ggccaggcgg gagagaggaa agctggtgcc gagctcctcc cgcagggaga gcggcagatc
     2041 ggtggcatct ctccaattgg cgatgggcgc gttccagagc cgccgaacga tctgatcggt
     2101 gcgataagcg gggagctttc gctcctgaac ccatcgcgcg acctcctcgc gagcggagtc
     2161 gggcgggagg tccagcagat tctgggcgat cggagtgacc ggcaccgggt gcgtgggcat
     2221 gggcggaaaa tagcaccccg gtgccgcctc tggactcctt ggtccattcg gcaagcagtg
     2281 tctaagctca actgcaataa tgcattgccg cactcatggg cgccgtatag gtttgacgcc
     2341 atgccgcctc aggttgcgca gtgctcctga cagaattgct cacaccagac cgggtcgtcg
     2401 ttccgctgac tgcacgcgac aaagccggcg ttatcgccga gctcacgcgt catctcgtgg
     2461 cgcgctccgg cggtgactac actcaggtgc tcgaggcagt ggaggagcgc gagaacgtgc
     2521 tgagcactgg aatcggactc ggagtggcca ttcctcacgc ccgctcttca gcagtgcggg
     2581 agctgagcat cgtgtgcggt ctgagcccgg tgccagttcc ctacgactcc atcgacggcg
     2641 atcccgtgcg cctcttcttt ctgatcgtcg gtccggagac taccgctggg cagcatgtga
     2701 agattctcag ccggattgcc cggctggtgc ggagagacca tctgcgccag cagctctgcg
     2761 aggccgatac cgcagaccag ttgtatgccg tcctgctcga tgccgaggag caggcctgat
     2821 gggcgcgacg gcgttgcgta cccatcgcgc tggttcgctg acccgtgagc aactcgggca
     2881 ggaggtgcgg ctcggcggct gggtgcatcg ccggcgggat ctcggaggac tcgtcttcat
     2941 cgatctgcgg gatcgcgcag ggctggtgca gctctcgttc aacccggagt ggacctctcc
     3001 tgaggtgatg gagcgagcgg cagggctcgg tgccgagacg gtcgtgctgg ttgccggcac
     3061 cgttgccctg cgaccgcaac cctctcgcga tagccagctg atctcgcgag aagttgaagt
     3121 ccacgtcagc ggtctggagg tggttgggcc ggcgcagact cctcctatac cagtagcact
     3181 taaggaaaag gaagatctac cggctgaaga gctgcggctc cgtcatcggg tcctcgacct
     3241 ccggcggccc gagctgcacc gcaatctcat ccttcgccac cggctcatgc aggcgacccg
     3301 ccgctacttc gatcagcacg ggtttctgga aatcgaaacc ccgatcctga ccaaacccac
     3361 gcccgagggc gcgcgcgact acctggtgcc aagccgggtg caccccggtg aattttttgc
     3421 gctcccccaa tcgccgcagc tctacaaaca acttctcatg gttgcgggat tggaccggta
     3481 cttccagatc gcccgttgtt tccgggatga ggatttgaga gccgaccgcc aacccgaatt
     3541 cacccagatc gacattgagg cctcgttcgt gggcatcgag gacgtgctca gctttggcga
     3601 gggactggtt catacgctct ggaaggaggc gggccactca ctgtcgctgc caatcccgcg
     3661 aatgcgtcac gcggatgctc tggaacgctt tgggacggac aagccggacc ttcggttcgg
     3721 gctggagatt ttcgacgcca ccgaagtctt tcgaagcgcc gagttttcgg tgacgcg
//
LOCUS       DASRPQ010000603         1141 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2264123, whole genome shotgun sequence.
ACCESSION   DASRPQ010000603 DASRPQ010000000
VERSION     DASRPQ010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2264123"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..473
                     /locus_tag="VFD73_07130"
     CDS             <1..473
                     /locus_tag="VFD73_07130"
                     /inference="COORDINATES: protein motif:HMM:NF020419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="HZI73791.1"
                     /translation="YGLALAGGYAIKAHGLVTRPSDDVDFATGHGAPVEEITEALADA
                     YRRAGFEVQVLRASGRKGHLDVELPSGAAYRVDVLKEPLNHSPTMMSFVPVLALADAV
                     ALKVGALHDRGLLRAARPPRRSGLEGRFAQRVSLPVRRSAGVPGGLGVTVSSRR"
BASE COUNT          207 a          344 c          365 g          225 t
ORIGIN      
        1 agtacgggtt agcgctggct ggtgggtacg cgatcaaggc ccatggcctg gtaacccgtc
       61 cgtcggacga cgtggacttc gccaccgggc acggtgcgcc agtggaggag attacagaag
      121 cacttgcaga cgcctaccgt cgcgctggtt tcgaggtcca ggtgctcagg gcgagcggca
      181 ggaaggggca cctagacgtg gagctgccat caggggcggc ttaccgcgtc gatgtgctca
      241 aggaaccgct gaaccattct ccgacgatga tgtcgttcgt accggtactg gcgcttgccg
      301 acgctgtggc gctgaaggtg ggtgcactgc acgaccgcgg attgctccgg gcagcgcgac
      361 cgccgcggcg atcaggctta gaaggtcggt ttgcgcaacg ggtcagcctg cccgttcgca
      421 ggtcagcggg tgtaccgggg ggtctgggag tcaccgtgag ttcccggcgt tgaccggccg
      481 atcgggcacg caacgggcac ggcttcttcg acccgaacta gcggcgccgc tggggcgttg
      541 gccagtcagg ctgactcatc tatgattcga tcactgccgt tccatgagag gaacgtgatg
      601 agtaacaagc cgcacctacg ccctcatcgg aagaaacggc aagcgagccg gactaccagg
      661 ctacttgtgg ccattttctt cctcacactc cttgccctcg caaccgccct agcagcgacc
      721 ggtcacattc aaccccatgg gtacattcct taagtagggt cagtaatggg tggtttcgga
      781 gtggagccgc ctattgaaat cgaaccgatg atctacgtat tacgagggtg ctccgtgcgt
      841 tgttcgccgg tcgaaagacc gcactagctt catgtccgca agctgctgct ggcgccaact
      901 gcgggggcca gagcctcggt agttccccgc ggcttaatga attgatcact cggcgcggtc
      961 aggaaggatc tatgacgtgg ccaacctcga tcctcgccct cagcagcgtg ctcggctcgc
     1021 agtccagctc tgcgctgcgc tgaccgcagc gatccctgcc tcagtggccg atctgcgcgg
     1081 atctctcgga tccggcacgg aagatcttta cagcgacatc gacattagct ggttggtgcc
     1141 c
//
LOCUS       DASRPQ010000604         1523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_386333, whole genome shotgun sequence.
ACCESSION   DASRPQ010000604 DASRPQ010000000
VERSION     DASRPQ010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_386333"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(320..>1523)
                     /locus_tag="VFD73_07135"
     CDS             complement(320..>1523)
                     /locus_tag="VFD73_07135"
                     /inference="COORDINATES: protein motif:HMM:NF013109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HZI73792.1"
                     /translation="WLALQHLPDAPLYPVLTGLLSLAAMLLLRRLTPRLPAALIVAAA
                     ATMLVGLLGGEAAGISVVGDLPSGLPHLVLPSLDPAIWRELVTGALAIVLVGYAEALG
                     GAKAAAMQGGGDIDPNQELIAHGPANILSGLFGGFLVVGSLSKTSVAMAAGARTQLAN
                     LVAAVFCFLTLVLLTPLFRGMPRPALAAIVIAAMLHLSKPGYLRDLLARTRWELALAG
                     TVIAGELTLGVPHGIVLGVTLSLLMLIYRTSHPEGAVLGQLPGTEAYRDVRRHPEAHT
                     FPGLLIWRVGGDLFFASIGRLDVGLKTALAAARPPAKQVLVDADSVNFIDASACDALR
                     NSIKQLQSQGITIGFARVRDEVRERMRLWGIEALVGSDNFHERVTDGVHAWQQPEGSD
                     AVSARPRG"
BASE COUNT          311 a          493 c          476 g          243 t
ORIGIN      
        1 ctttgcgtgc tcgaaccgag cttccgtgcg ttcatgtcct cgatcatccg agcacgcagc
       61 ggggtgatgg ccgttttcat ggaaaactcc tgtcggggat gaggttgacg acacctcgat
      121 cctcaagaca ggacacccct ggcgctaccg acgatctcta accggttgct gtgcccggag
      181 atcctctcca cctccatcaa ctatcgcgga gcgatttagt gcgatgaccc aaaccggaag
      241 tggtggaaac ctccgggaca gccctcacgt gcgcgcacga gcgtaccgcg tgtcccgttt
      301 ttccctgtca ggtcgactat cacccccgcg gtcgcgcgga cacagcgtcc gacccttctg
      361 gctgttgcca ggcgtgcacg ccgtcggtca cccgttcgtg aaaattatcg gaaccgacga
      421 gagcctctat gccccagagc cgcattcgct ctcgtacctc gtcacgaacg cgggcgaagc
      481 cgatggtgat cccctggctt tgcaactgct tgatggagtt ccgcagcgcg tcgcaggcgc
      541 tggcatcgat aaagttcacc gaatccgcat ccaccagcac ctgcttcgcc ggcggacggg
      601 cagccgccag tgcagtcttt agacccacgt cgaggcgacc aatactagca aagaacaggt
      661 caccgccgac gcgccagatc agcagaccgg ggaaggtgtg cgcctcggga tggcgcctga
      721 cgtcgcgata ggcctctgtg ccgggaagct ggccgagcac agcgccttcc gggtgactgg
      781 tccggtagat caacatcagc agcgataaag tcacgccgag gacgatccca tgcggcacgc
      841 ccagcgtcag ctctcccgcg atgacggtcc cggcaagagc caactcccaa cgggtgcggg
      901 cgagcagatc gcgcaaatac ccgggcttgg agagatggag catcgctgcg atcacgatgg
      961 cggcaagcgc ggggcgtggc atgccccgga acaacggcgt caacaacacc aaggtgagga
     1021 agcagaagac tgctgcgacg agattggcga gctgggtgcg cgcaccggcg gccatagcca
     1081 cggaagtctt ggacagactg ccgacaacga gaaacccgcc gaaaagaccg ctcagaatat
     1141 tggccggccc gtgcgcgatc agctcctggt tcgggtcgat atcgccgcct ccctgcattg
     1201 ccgcggcctt tgctccgccg agcgcctcgg catagccgac cagcacgatg gcgagcgcgc
     1261 cggtcacgag ctccctccat attgcagggt caaggctggg caacacgagg tggggcaggc
     1321 cggacgggag atcgccgacc acgcttatgc ctgcggcctc gccgcccaac agaccaacga
     1381 gcatcgtggc cgcggctgcg acaatcaagg ctgccggtaa gcggggtgtc aagcggcgta
     1441 gcaacagcat ggctgcgaga ctgagtaaac cggtcagcac aggataaagc ggggcgtccg
     1501 gtagatgctg cagcgcgagc cac
//
LOCUS       DASRPQ010000605         1522 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2891341, whole genome shotgun sequence.
ACCESSION   DASRPQ010000605 DASRPQ010000000
VERSION     DASRPQ010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2891341"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..204
                     /locus_tag="VFD73_07140"
     CDS             <1..204
                     /locus_tag="VFD73_07140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73793.1"
                     /translation="AVLRVVKPSHFPANADAIPGTCADRHGGGRKSPAERAGLRPVQR
                     MPTIGLAGVLLLVTIGALGEETG"
     gene            234..437
                     /locus_tag="VFD73_07145"
     CDS             234..437
                     /locus_tag="VFD73_07145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73794.1"
                     /translation="MLVAVWHGLYNFVSGTQGATGMVAAVVTTLVMIQGVLITWRCVP
                     GGTDGHLCSDRRANGPASAQRWG"
     gene            1008..1202
                     /locus_tag="VFD73_07150"
     CDS             1008..1202
                     /locus_tag="VFD73_07150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73795.1"
                     /translation="MSMGNSPAERAIVKQQSERLMAKADADRAGRLAGHKSLFRRLLE
                     RLRPHGQQPISDSEPQPSDP"
BASE COUNT          253 a          494 c          483 g          292 t
ORIGIN      
        1 gctgttctcc gcgtcgtcaa gcccagccac ttccccgcca atgccgatgc gattcctggg
       61 acttgcgctg atcgccatgg cggcggccgg aagagccctg ccgagcgcgc cggacttcgg
      121 ccggttcagc ggatgccgac cattggcctg gcgggtgtgc tgctactcgt taccatcggc
      181 gcgctgggcg aggagactgg ctgacgcggc catgcccatc cggcggcagc atcttgctgg
      241 tcgccgtctg gcacgggctc tacaacttcg tcagcggaac ccagggcgcc accggcatgg
      301 tcgccgccgt cgtcaccacc ctggtcatga tccagggtgt tctcatcacc tggaggtgcg
      361 tgcccggcgg cacggacggc catctgtgct cggaccggcg agctaatggc ccggcatctg
      421 cgcagcggtg gggctaaagg cggatcccag gctcggaatg cgttcgtgac ctggctttcc
      481 ttcggagcgg gtgacgggaa tcgaacccgc accatcagct tgggaatctg tgccgtccgg
      541 gcctgtcaca tggtctgacc tgcggggcgg ggtgtccgtg agtgaccgtg agagaccact
      601 cgtcatcagg gttaatggcc cgctaatggc ccggcgatcg cagaatgccg acccgcggac
      661 ccgcggatta agagacaggt tcaatcatgc tgcaagcagt ccggatcggt ccgaccttca
      721 gtctgagctg ggactacctg ctggcctcta tacgcggatg tccatggccg tgtgacggcg
      781 ttgctgcttg cggcccgggc agtgtgtgac ctcttccgtg ccagggacta tcggctcggc
      841 ccgtcatctg ctcgatcaca ggtccggccc cgatctatgt atccgtcgct ggtcatgagg
      901 ctccgtgaga ggctgcttca tcaggcacgt ggcgggcacg accatctgac ctcgaccacc
      961 ctccctgcag gctgtacgat caagccacct gatgcaggga gcagacaatg tccatgggta
     1021 acagccctgc tgaaagagca attgtcaagc agcaatccga gcggctcatg gccaaagctg
     1081 acgccgaccg ggcaggacgc ctggcgggac acaaatcgct cttccggcgc ctgctcgaac
     1141 gcctacggcc gcacgggcag caaccgatca gcgactcgga gccccagcct tctgatccgt
     1201 agatcagtgc cacacgtcca gccagtgcgt cggagtgcat atccgctggt cagcgtccta
     1261 cctggtatcc ataaccgacg ccacagtccc gtaccgtccg gtcagtccgt gcgaaagctg
     1321 tgtggaagat ccctgccgat caccagtact gcagcgatcc ccggatctga gcccagccag
     1381 gactcttgca cctttgcctg atcttcgctc ctgccgtgtc gttctcgtgg ccgccattgg
     1441 ctagtgcggg ctagccgccg agcagggtga gtgctttggt gacgtcggag tcgtgtccag
     1501 tggacaggtc ttgcgcggtg ag
//
LOCUS       DASRPQ010000606         1330 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3517323, whole genome shotgun sequence.
ACCESSION   DASRPQ010000606 DASRPQ010000000
VERSION     DASRPQ010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1330
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3517323"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(30..1010)
                     /locus_tag="VFD73_07155"
     CDS             complement(30..1010)
                     /locus_tag="VFD73_07155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZI73796.1"
                     /translation="MSAPKLSKKPAELLPVPRILKQVSRRIVGQDAMVERLLVGLLTG
                     GHILLEGVPGLAKTLAVRTLAEIINASFSRIQFTPDLLPADVIGTMVFSQKSQEFHVK
                     KGPLFAQIILADEINRAPAKVQAALLEAMQEHQVTIGGSTYPLEEPFMVLATQNPIES
                     EGTYPLPEAQLDRFMLKVRVGYPSRDEEKEVLLRRASGKEVEIERLLEPEAILSAREA
                     IASLYMDQKVVDYIVDLVRATRDPGLVGLNDLKPLVAFGGSPRASIALAQAARAHAFL
                     RERAYVVPEDVRALAPDVLRHRIVLTFEAEAEDVTTDDVVTRVLGAVRVP"
     gene            complement(1007..>1330)
                     /locus_tag="VFD73_07160"
     CDS             complement(1007..>1330)
                     /locus_tag="VFD73_07160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73797.1"
                     /translation="DGRPVIPTQVRVRPGSEGRSILDVTLEEGRNRIVRRWCEAMGLK
                     VDRLARLSYGPVRLGDLQPGQYRPLTPREEASLYQAIGLNPDAAETSPRREASRRTSR
                     GARSR"
BASE COUNT          223 a          457 c          405 g          245 t
ORIGIN      
        1 gactcgtgac tcgtgactcg tgactcccct cacggcaccc gtaccgcacc cagcacccgc
       61 gtcaccacgt catcggtggt cacgtcttca gcttccgcct cgaaggtgag cacgatccgg
      121 tgccgcagca catccggcgc cagcgcccgc acgtcttccg ggacgacgta ggcccgctca
      181 cggagaaacg cgtgggctcg ggccgcttgc gccaacgcaa tcgaggcgcg cggcgacccg
      241 ccaaaggcga ccagaggctt cagatcgttc agccctacca gcccagggtc tcgcgtggcc
      301 cgcaccagat ccacgatgta atccaccacc ttctggtcca tgtacaggct ggcgattgcc
      361 tcccgcgccg agaggatcgc ctctggctcc agcaggcgtt cgatctccac ttccttaccg
      421 ctggcccgac gaagcagcac ttccttctct tcgtcccggc tgggatagcc gacccgcacc
      481 ttcagcatga accggtcgag ctgtgcttcg gggagaggat aggtgccttc actctcgatc
      541 gggttctgag tcgcgagcac catgaacggc tcttccaggg ggtaggtcga gccaccgatc
      601 gtcacctggt gttcctgcat ggcctccagc agggcggcct gcactttggc tggagcgcgg
      661 ttgatttcgt cggccaggat gatctgcgcg aagagcggtc ccttctttac atggaactcc
      721 tggctcttct gactgaacac catcgtgccg atcacgtcgg cgggcagcag atcgggcgtg
      781 aactggatcc gcgagaacga cgcattgatg atctccgcca gcgtgcgcac cgcgagggtc
      841 ttggccagac cgggaacgcc ctccagcagg atgtgtcctc cggtcagcag gccgaccagc
      901 agtcgctcga ccatggcatc ctggccgacg atccggcggg acacttgttt gagaatgcgc
      961 ggaaccggca acagctctgc cggtttcttg gaaagcttgg gggcgctcat cgcgatctcg
     1021 ctcctcggga tgttcttctg gacgcctccc ggcgggggct ggtttcagcg gcatcggggt
     1081 tcaggccgat cgcctgatac agcgaggctt cttcccgcgg cgtcagcgga cggtactggc
     1141 cgggctgcag atctcccagc cgaactggtc catacgagag ccgggccagg cgatccacct
     1201 tgaggcccat cgcctcgcac cagcggcgaa cgatccggtt gcggccctct tccaacgtga
     1261 catccagaat gctgcgaccc tcgctgccag gacgcactct cacctgggtg gggatcaccg
     1321 gacggccatc
//
LOCUS       DASRPQ010000607         1702 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4143770, whole genome shotgun sequence.
ACCESSION   DASRPQ010000607 DASRPQ010000000
VERSION     DASRPQ010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1702
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4143770"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            49..>1702
                     /locus_tag="VFD73_07165"
     CDS             49..>1702
                     /locus_tag="VFD73_07165"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HZI73798.1"
                     /translation="MTRVRTGPTSVALLVLLCWLVAYPLVLVLIEGFRGPQGWTVEYV
                     RLFFTRHNEGQALWGSLWISLATVGLAAVIGVPLAYLFWRYDFPGRRILGALIALPAV
                     LPPLVGVIAFLFLYGESGFTSLLVQRVLGLEEPPWRLQGAGAILLVHAYSMYVYFYLF
                     TRAGLAALDGALFEAAASLGAGRWRTLRKVVLPLLYPALTGGALLTFMTALASFSAPY
                     IFGGGFRVMTTQIVATRLNGDDQLAMIETASLTLLALIALWFLRGAGVEPTASGGRKG
                     IAPSLIPIRSRVLRAIAGLLGWVLTIILLLPHLTLLLVSFVPAGTWTTEPVPPVYTWR
                     NYLTLVSDPVRSRPLLNSLWLATLATLAAVVIALVAGILASHRRGGLVRTVQALLGLP
                     WAVPGTVFAIALATAFSVHAPLAGRFILVGTIWILPLAYLVRNLPITSRAVTAGLRAL
                     DPALNEASASLGAGRWRTLRRVTLPLLRPALMAGASLAFVTAFGDFVTSIMLYTYNTR
                     PISLEILSSLRQSDVGVAAAYGVVLMAVSALVFAIGAEQGSPG"
BASE COUNT          218 a          556 c          560 g          368 t
ORIGIN      
        1 gagccgtcgg gcgggcggtg gcatccacct ctttccacga ccctcggcat gacccgggtg
       61 cggaccgggc cgaccagcgt ggccctcctc gtgctgctgt gctggctggt cgcctatccg
      121 ctcgtactgg tcctgatcga aggcttccga gggccgcagg gctggactgt ggaatacgtc
      181 cggctgtttt tcactcggca caatgagggg caggcactct ggggaagtct ttggatctcg
      241 ctcgcgacag taggtctggc ggcagtcatc ggcgttcctc tcgcctatct cttctggcgc
      301 tatgacttcc ctgggcggcg aatcctcggc gcgctgattg ccttgccggc agtactgccg
      361 ccgctcgtgg gggtgatcgc gttcctgttc ctttatggcg agagtggctt cacgtcgctc
      421 ctggtgcaac gggtactcgg cctggaggag ccaccgtggc gattacaggg cgccggagcg
      481 atcctgctgg tccacgccta ctcgatgtac gtctacttct atctgttcac tcgcgccgga
      541 ctggcagctc tggacggcgc gctgttcgaa gcggcggcca gtctgggcgc cggccgctgg
      601 cgcacgctcc ggaaagtcgt gctacctctt ttgtatcctg ccctcacggg tggcgcgctg
      661 ttgacgttca tgacggcgct ggcatcgttc agcgccccct acattttcgg cggggggttt
      721 cgggtgatga ccacgcagat cgtggccact cggctgaacg gcgatgatca gctggcgatg
      781 atcgaaaccg cgtcgctcac gctgctcgcc ctgatcgcgt tgtggttcct gcgtggcgcg
      841 ggcgtcgagc cgactgcgtc cggcgggcgc aagggaattg ctccgtctct catcccgatt
      901 cggagccgcg tgcttcgggc catcgcaggg ctgctgggtt gggtgctcac gatcattctt
      961 ctgctccccc atttgaccct gctgctcgtc tcgttcgtgc cggccggtac ctggaccacc
     1021 gagccggtcc ccccggtgta cacctggcga aactatctga cgttggtcag cgatccggtc
     1081 cgctcccggc cgttgctcaa cagtttatgg ctggccacgc tcgccacttt ggctgcggtc
     1141 gtcattgccc tggtggctgg gatcctcgcg agtcaccgca gaggcgggct ggtccggacg
     1201 gtccaggcgc tgctgggact gccatgggcg gttccaggga cggtattcgc cattgcgctg
     1261 gcgaccgcct tcagcgtcca cgcgccgctg gccggccggt tcatcctggt gggaaccatc
     1321 tggattcttc cgcttgccta tctggtgcgg aacctgccga tcacgagcag agcggtcacg
     1381 gccgggctca gggcactcga tccggctctc aacgaagcct cggccagcct gggcgccggt
     1441 cgttggcgaa cgctccgacg cgtgacgctg cctctgctgc gaccggccct catggccggc
     1501 gccagtctcg ccttcgtgac cgcattcggt gacttcgtca cctccatcat gctgtacacc
     1561 tacaacacca ggccgatctc gctcgagatc ctgtcgagcc tgcgtcaatc cgatgtgggg
     1621 gtggcggccg cgtacggagt ggtcctgatg gcggtaagtg ctctggtgtt cgccatcggg
     1681 gcggagcagg gaagcccagg at
//
LOCUS       DASRPQ010000608         2405 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_386519, whole genome shotgun sequence.
ACCESSION   DASRPQ010000608 DASRPQ010000000
VERSION     DASRPQ010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2405
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_386519"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            324..731
                     /locus_tag="VFD73_07170"
     CDS             324..731
                     /locus_tag="VFD73_07170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73799.1"
                     /translation="MSRSNVALSIRISSLSYQRQREPGCHDDPNVLTPHHYPEHLCDV
                     ARISPIDGSKENNPPDLIVAGMALTISSLPYMGAEAGLLWTLVGGMFGVLIAITGVTR
                     QGYVEAEFGEWQLKRSTAVWTSAAGGAAPTAAW"
     gene            complement(826..1053)
                     /locus_tag="VFD73_07175"
     CDS             complement(826..1053)
                     /locus_tag="VFD73_07175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73800.1"
                     /translation="MDYVKALFSAKGLVIVVYILIGVFVNTSPPHLPTAAFTAAALHS
                     WVQYFISILFWPLSFWHPTFNVGKWPAGSTP"
     gene            complement(1279..1938)
                     /locus_tag="VFD73_07180"
     CDS             complement(1279..1938)
                     /locus_tag="VFD73_07180"
                     /inference="COORDINATES: protein motif:HMM:NF024790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M50 family metallopeptidase"
                     /protein_id="HZI73801.1"
                     /translation="MLSRIGEIQVPLPPPVALFLGILTFVAMLGPMLWKVTTHVNTIA
                     HEAAHAIVGFGAGRRVRSVKINPDGGGSTVMVPNSGFGYGVASFAGYLGPSVAGLIAA
                     RLISIGRIVAVLWLGLLLLVVMLLLVRNSFGGIAILVSGALLYLTLRYTTTGVETAVA
                     YGVAWFLLLSGPKAVLGGPTKPQDAKILANMTPLWASGWYYLWLLGTIAALAAGGAML
                     I"
BASE COUNT          477 a          751 c          749 g          428 t
ORIGIN      
        1 ccacgtcata gcaggtcacc ggcttggccg gtgagatact tcgcgaccgg gcggccggtc
       61 tgcggcgaat actcggagaa gtttcaccag cccgcaggga tctgctgtca tcgtggcggc
      121 actccggggg atacggcagg ctgatcgcga ccaccgcgga ttcgtcatga gcgggccggc
      181 cctggcgccc tcacgatccg agcgtgcacg gacaccggta ccagcggctt ctaccagata
      241 tatccggggc gatgccgtcc gtggacacga ccctctgcgc tgggtgccgc ttatgagagc
      301 agcgaacttg atcattaccg agggtgagcc gcagtaacgt tgccctctcc atacgcatct
      361 cctcactctc gtatcagcgt cagcgtgagc ccggctgcca cgatgacccc aacgtgttga
      421 ccccgcacca ttacccggag cacctgtgcg atgtcgcccg catctcccca attgatggca
      481 gcaaggagaa caaccccccg gatctcatcg ttgcaggcat ggcgctcacc atctcatccc
      541 tgccatacat gggcgccgaa gcaggccttc tgtggactct cgtgggtggg atgttcggcg
      601 tgctcatcgc catcaccggc gtgacccgcc aaggctatgt agaggcggaa ttcggggagt
      661 ggcagctgaa gcgcagcacc gctgtgtgga ccagcgccgc cggcggcgct gcgccgacag
      721 cggcctggta aatcagcttc tatgagattc ctgtcacggt gttctggaag gacttcttgc
      781 caaggctttc gcggagcgtt tgctcgagtg cggctaccgg atcgctcagg gcgtcgaacc
      841 ggcaggccat ttacccacgt tgaatgtggg gtgccaaaag cttaggggcc agaagaggat
      901 cgagatgaag tactgaaccc agctatggag cgctgctgca gtgaacgccg ccgtcggcaa
      961 atgggggggt gaggtattga cgaagacacc gatcaagatg tagacaacaa tgacaaggcc
     1021 ctttgcgctg aagagggcct ttacgtagtc caccgcagct cacttcctcc ctacggacgc
     1081 cagaactgct gcgcgctctg gccgtcggca gggacccagt tgcctcacag cgacgctacg
     1141 gcccgtatct catacacaga tcacgtggca tcttctagca ggataggtgg cccatcgcct
     1201 tctgcaacgt tgacactccg ggaggtcgct gcaaaaggca gatctgctga ccagccaggc
     1261 agagcacaga agcgccggtc aaatcagcat ggctccgccg gccgcgagtg cggcgatcgt
     1321 cccaagtagc cacaggtagt accatcccga cgcccagagg ggagtcatgt tggcgaggat
     1381 cttcgcgtcc tgtggcttgg tagggcctcc aagcaccgcc ttaggcccgg acaggagcag
     1441 gaaccaagcc acgccatagg ccacggcggt ctcgacgccg gttgtcgtgt atcgcagggt
     1501 gaggtagagc agtgctccgc tgactagtat cgcgataccg ccgaatgagt tgcggaccag
     1561 cagcagcatg accacaagca gcagcagacc cagccacaga accgcgacga tacgaccgat
     1621 ggagattagc cgcgccgcga tgagccccgc gacgctgggg ccgaggtagc cggcgaatga
     1681 ggcaacgccg tatccgaagc cactgttcgg caccattaca gttgaaccgc caccgtccgg
     1741 gtttatcttc acgctacgga ctctgcggcc ggcaccgaac ccgacgatcg catgcgcggc
     1801 ctcgtgggcg atggtgttga cgtgggtcgt gaccttccaa agcatcgggc cgagcatcgc
     1861 gacaaacgtc agtatgccga gaaacagcgc gaccggcggc ggcaggggga cctgaatctc
     1921 gccgatccgg ctcagcacgg tacccagcgg cgatggatgc gtcgcctgcc cattccgctc
     1981 actaaggtct ccccgagtag gccgtgctta cctgcagcgc gcaatagtgt cgtgccgtcc
     2041 caagatcctc taccgtcacg cgttattccc gataggtcac gactcgaatc tggcctgggc
     2101 cgtgcagcgg gtctcaggat cgcgggtgcg gcctgctact ttgcgtctgg gctgacgtaa
     2161 gtaccgcgcc ggggcacggt gaagacgagt ccttcggttc ggaggatgcc gatcgcccgg
     2221 agcacggtgt cacgacctac atcgtgttcc tgctggagtt gctccacgga cggcagggag
     2281 acttagtttg agagaacact tcacgccgtg ccgcgacctg tgaagctcca ggtcatgctg
     2341 aagccccaag gcttggctaa tttaggtgag cccaccacag gccgactgac caggcgatac
     2401 gacgt
//
LOCUS       DASRPQ010000609         2653 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1325169, whole genome shotgun sequence.
ACCESSION   DASRPQ010000609 DASRPQ010000000
VERSION     DASRPQ010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2653
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1325169"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            123..>2653
                     /locus_tag="VFD73_07185"
     CDS             123..>2653
                     /locus_tag="VFD73_07185"
                     /inference="COORDINATES: protein motif:HMM:NF012873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="condensation domain-containing protein"
                     /protein_id="HZI73802.1"
                     /translation="MAPRTEIEQTLAGMWAELLRLERVGIHDNFFDLGGHSMLATLVM
                     SRVQQAFQVEIEVRNLFEEPTVAELGKRIESALGGEKKSGEAEAIPRAERSGALPLSY
                     AQERLWFLDQFQPGNDFYNVPMGFRLKGELDAGVLKKSLAEIVRRHEVLRTRFVAQAG
                     GPAQQVMESVELEMPVVDLRHLEPEAREAQAGRKAADEGRKAFDLGRGPLLRVVLVRL
                     ADMEHMLVVTMHHSVIDAWSLNIFQKELAALYEAYRSGRKPSLKELPIQYGDYAVWQR
                     QWLQGEVLERQMGYWKKQLEGMPGALELPTDRPRPAVQSFEGGLEMRSVAPELWEGLK
                     RLSRQEGATLFMTLLAAYEVLLARYSGQQDFAVGTPVANRSRMETEGLIGFFLNTLVM
                     RAKLGGKPSFRELLGRVRESALGGYAHQDVPFERLVEELAPERDLSRSPVFQVMFTLQ
                     NAAMSKSGFGGLEVSSVEVEVSTSKCDLLLTAGEELEGPVIGLNYNTELYDGETAQRM
                     LGHYERLLQEIVRDAEQGIWDLPLLSGEEEEQQREWNRRGREYPRSATVAELFEEQAR
                     RRAKAIAVVCGEQEISYEELNRRSNQLGHYLRKGGVREESRVGICVERSLEMVVGLLG
                     ILKAGGAYVPLDPEYPQERLAWMVEDAGVGVLITGSREQERLAGTGARVVCLEQEWEA
                     IAQESGEKPESQTGAEDLVYVTYTSGSTGQPKGVGVTQRNVVRLVKNNDYAQFSEGEV
                     VLQYAPVSFDAATMELWGGLLNGGKLAVYGGGKGSLEELGREVRKQGVTTMWLTAGLF
                     HMMVEERLEDLAGVRQLVAGGDVLRVQAVKKVVEQMADCRMINGYG"
BASE COUNT          552 a          576 c         1085 g          440 t
ORIGIN      
        1 cctatatgat cccgtccgcc ttcgtgccgc tagagcagtt gcccctgact ccgaccggca
       61 agttggatcg tcgtgcgctc ccggccccta gctccgtgcg agcagctgag ggcgaacacg
      121 atgtggcacc gcgcaccgag attgaacaaa cgctggccgg catgtgggcg gaactgctgc
      181 gtctcgagag ggtaggcatc catgacaact tttttgatct gggtgggcac tcgatgctgg
      241 cgacgctggt gatgtcgcgg gtacagcagg cattccaggt ggagatcgaa gtaaggaacc
      301 tgtttgagga gccgaccgtg gccgagctgg gaaagaggat cgaatcggcg ctgggaggag
      361 agaagaagag cggagaagcg gaggcgatac cacgagcgga gcggagcggt gcgctgccgc
      421 tgtcgtacgc gcaggagcgg ttgtggtttc tggaccagtt ccagccggga aatgattttt
      481 acaacgtgcc gatgggcttc cgcctgaaag gggaactgga cgccggggtg ctgaaaaaga
      541 gcctggcgga gatcgtgaga cggcatgagg tgctgcggac gcggttcgtg gcgcaggccg
      601 gaggtccggc gcagcaggtg atggagtcag tggaactgga gatgccggta gtcgacctgc
      661 ggcacctgga gccggaggca agagaagcgc aggcggggcg gaaggcggcg gatgaaggac
      721 gcaaggcatt cgatctgggc cgcggcccgc tgctccgcgt tgtgcttgtg cgcctggctg
      781 acatggagca catgttggta gtcaccatgc atcactccgt cattgatgcg tggtcactca
      841 atattttcca gaaggagctt gcagctctat acgaggccta tcgttccggc agaaagccgt
      901 cgctcaagga gctgccgatc cagtacggag attatgcggt gtggcagcgg cagtggctgc
      961 agggagaagt gctggagcgg cagatggggt attggaaaaa gcaactggag gggatgccgg
     1021 gagcgctgga actgccgacg gaccgtccgc gaccggcggt gcagagcttt gaaggtggac
     1081 tggagatgag atcggttgcg ccggagctgt gggaagggtt gaagcggctg agccggcagg
     1141 aaggcgcgac gttgttcatg acgctgctgg cggcgtatga ggtgctgctg gcgcgctaca
     1201 gcggacagca ggattttgcg gtgggaacgc cggtggcgaa tcggagccgg atggaaaccg
     1261 aagggttgat cggcttcttc ctcaacacgc tggtgatgcg ggcaaagctg ggcgggaagc
     1321 cgagcttcag ggagttgctg ggacgggtgc gggagtcggc gctgggtggc tacgcgcacc
     1381 aggacgtacc gtttgagcgg ctggtggaag agctggcgcc ggagcgcgac ctgagccggt
     1441 cgccggtgtt tcaggtgatg ttcacgctgc agaatgcggc gatgagcaag agcgggtttg
     1501 gcggtctgga agtgagctcg gtggaagtgg aggtcagcac gtcaaaatgc gatctgctgt
     1561 tgacggccgg ggaagagctg gaagggccgg tgatcggcct gaactacaac acagagctgt
     1621 atgacggaga aacagcgcaa cggatgctgg ggcactacga gcgcctgttg caggagatcg
     1681 taagagatgc ggagcagggg atatgggatc tgccgttgtt gagcggggaa gaagaagagc
     1741 agcagcggga gtggaaccgg agagggcggg agtatccccg gagcgcgacg gtggcggagc
     1801 tgttcgagga gcaggcgcgg aggcgagcca aggctatagc ggtggtgtgc ggggagcagg
     1861 agatcagcta tgaagagctg aatcgtcgaa gcaaccagct ggggcactat ctcaggaagg
     1921 gcggagtgag ggaagaatcg cgggtaggca tttgcgtgga gcggagcctg gagatggtag
     1981 tggggctgct ggggattctc aaggcgggag gagcgtacgt gccgctggac ccggagtatc
     2041 cgcaggagcg gctggcgtgg atggtggaag atgcgggagt gggagtgctg ataacgggca
     2101 gccgagagca ggagcggttg gcggggaccg gagcgcgggt ggtgtgcctg gagcaggagt
     2161 gggaagcgat tgcacaggag agcggggaga agccggagag ccaaaccgga gcagaagatc
     2221 tggtgtacgt gacgtacaca tcaggctcca cgggacagcc gaagggagtt ggagtcacgc
     2281 agagaaacgt agtgcggctg gtgaagaaca acgattatgc ccagttcagc gagggggaag
     2341 tggtgctgca gtacgcgccg gtgagttttg atgcggccac gatggagctg tggggagggc
     2401 tgctgaatgg ggggaagctg gcggtgtacg gaggagggaa gggatcgctg gaggagttgg
     2461 ggagagaggt acggaaacag ggagtgacga cgatgtggct gacggccggg ctgttccaca
     2521 tgatggtgga agagcggctg gaggatttag ccggggtgag gcagttggtg gccgggggag
     2581 acgtgctgcg ggtgcaggcg gtgaagaagg tagtggagca gatggcggat tgccggatga
     2641 tcaacggcta cgg
//
LOCUS       DASRPQ010000610         2542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1638049, whole genome shotgun sequence.
ACCESSION   DASRPQ010000610 DASRPQ010000000
VERSION     DASRPQ010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1638049"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1243)
                     /locus_tag="VFD73_07190"
     CDS             complement(<1..1243)
                     /locus_tag="VFD73_07190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HZI73803.1"
                     /translation="MIDFRSGREPKSSSFDYISIRIAAPEEIRGPRDTKERERLELQG
                     QRTWWSWGEVTKPETINYRSFKPEKDGLFCERIFGPVKDWECHCGKYKRIRYRGVICD
                     RCGVEVTLSKVRRERMGHIELSVPVAHIWFFKTLPSPMGNLINITLRDLERVIYYSSY
                     IVIEPGKQDVEANQLIDEDEYLTLRTKARDEGDTAFKADIGAPAVRELLSRIDIRRLA
                     DELRSGVANETSQHRKKQMLKRLKIVDAFLSSGESGDLANDPAWMILDVIPVIPPDLR
                     PLVPLDGGRFATSDLNDLYRRVINRNNRLTKLIQHKAPEVILRNEKRMLQEAVDALFD
                     NGRRSKAIRGRGKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELRLHQC
                     GLPKAMAVELFKPFIIHKLVEK"
     gene            complement(1247..>2542)
                     /locus_tag="VFD73_07195"
     CDS             complement(1247..>2542)
                     /locus_tag="VFD73_07195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HZI73804.1"
                     /translation="ARERAKVEEKAEDQIDKILQPDELPPGVIQLVKVYIAEKRKISV
                     GDKMAGRHGNKGIVARIVPEEDMPFLPDGTPVDIVLNPLGVPSRMNVGQILETHLGWA
                     ARILGFEAKTPVFRGADEAEIGALLRLAGFRWAAEGLRLRARPPELAPQAITRMVQDL
                     KKVAPNGERTTLLEAGVAMLGARNASQETRDLFQGLREFLVNAAKELAERELGQRREE
                     VEFHRAQSQNGGREEPGLAKVLRDAEKAAGLSQAEVLEAAGMPALAGLLGPKAESDVD
                     AAANELLRAAGLTAAGKAQLRDGRTGHLFEGEVTVGSIYMLKLSHLVDDKIHARSIGP
                     YSLVTQQPLAGKAQFGGQRFGEMEVWALEAYGAAHVLQEMLTVKSDDVNGRSKVYEAI
                     VKGQNLPEPGIPESFNVLVKELQALGLKVTLGTTEAGDE"
BASE COUNT          392 a          880 c          773 g          497 t
ORIGIN      
        1 ccttctccac cagcttgtgg atgatgaacg gcttgaacag ctcgaccgcc attgccttgg
       61 gcagaccaca ctggtgcaga cggagctccg ggcccaccac gatgaccgag cggccggagt
      121 agtcgacccg cttgccgagc aggttctggc ggaaccggcc ctgcttgccc ttcagcatgt
      181 cggaaaggct cttgagcgga cgcttgccac ggccacggat tgccttggag cgccggccgt
      241 tgtcgaacag cgcgtccacc gcctcctgga gcatgcgctt ctcgttccgg aggatgactt
      301 ccggcgcctt gtgctggatc agcttggtga gccggttgtt ccggttgatc acccgccgat
      361 acagatcgtt caggtcggac gtggcgaaac gtccaccgtc caacgggacc agcggccgga
      421 gatcgggcgg gatgaccgga atgacatcga gaatcatcca cgccggatcg ttggccagat
      481 cgccggactc gcccgatgac aggaacgcgt cgacgatctt gagccgcttg agcatctgct
      541 tcttgcgatg ctggctcgtc tcgttggcca ctccggagcg gagctcgtcg gccagccggc
      601 gaatgtcgat ccggctcaag agctcccgta ccgcgggcgc gccgatgtcg gccttgaacg
      661 ccgtgtcgcc ttcgtcgcgt gccttggtac gcagggtgag gtactcgtcc tcgtcgatca
      721 gctggttcgc ctcgacatcc tgtttgcccg gctcgatcac gatgtagctc gagtagtaga
      781 tcactcgctc gaggtcgcgc agggtgatgt tgatcaggtt gcccatgggg ctgggcagcg
      841 tcttgaagaa ccagatgtgg gccaccggca cgctcagctc gatgtggccc atgcgctcgc
      901 gccgcacctt gctcagcgtc acctcgacgc cgcaccggtc gcagatcacc ccgcgatagc
      961 ggatccgctt gtacttcccg cagtggcact cccagtcctt gaccggaccg aagatgcgct
     1021 cgcagaagag gccgtccttc tccggcttga acgaccggta attgatcgtc tccggcttgg
     1081 tgacctcgcc ccacgaccac caggtgcgct gcccctgcaa ctccaggcgt tcgcgctcct
     1141 tggtgtcgcg cggcccgcgg atctcttcgg gcgcggcgat gcgaatgctg atgtagtcga
     1201 aactcgagct cttgggctcg cgaccgctac gaaaatcaat catgatctat tcatctcccg
     1261 cttcggtggt cccgagagtc accttgagac cgagcgcctg cagttccttc accaatacgt
     1321 tgaacgattc ggggatgccg ggctccggca gattctgccc cttcacgatg gcttcgtaca
     1381 ccttgctccg gccattcacg tcgtccgact tgaccgtgag catctcttgc agcacgtgcg
     1441 cggcgccgta cgcttccagc gcccacactt ccatctcccc gaaccgctga ccgccgaact
     1501 gcgccttacc cgccagtggc tgttgggtca ccagcgagta cggaccgatc gaccgggcgt
     1561 ggatcttgtc atctaccaag tggctcagct tcagcatgta gatggagccg acggtgacct
     1621 cgccctcgaa gaggtgaccg gtccggccgt cccggagctg cgccttgccc gctgccgtga
     1681 gacccgcggc ccggagcagc tcgttggcgg ccgcatccac atcggattcg gccttgggac
     1741 cgagcaagcc tgcgagcgcc ggcattcctg cggcttccag gacctccgcc tgcgacaggc
     1801 cagcagcctt ctcggcgtcg cgaagcacct tggccagacc gggctcttct cggccgccgt
     1861 tctgcgactg cgcccgatgg aactccactt cctcacgccg ctggcccagc tcgcgttccg
     1921 ccagttcttt cgcggcgttc accaggaatt ccctgagtcc ctggaacaag tcgcgggtct
     1981 cctgcgacgc attccgcgca cccagcattg cgacgcctgc ttccaacagc gtggtgcgct
     2041 ccccgttggg ggcaaccttc ttgaggtcct gcaccatccg ggtgatcgcc tggggcgcca
     2101 gctcgggtgg gcgggcccgg agccggagtc cttccgccgc ccagcggaac ccggcgagcc
     2161 ggagcagcgc tccgatctca gcctcatcgg ctccccggaa caccggcgtc ttggcttcga
     2221 agcccaggat ccgggcggcc cagccgaggt gagtctccag gatctgtccc acgttcatac
     2281 ggctggggac gcccagaggg ttgaggacga tgtcgaccgg ggtgccatcc ggaaggaagg
     2341 gcatgtcctc ttccggcacg atccgggcga cgatgccctt gttcccgtgc cggcccgcca
     2401 tcttgtcgcc cacggagatc ttccgcttct cggcgatata caccttcacc agctggatga
     2461 cgcccggagg caactcgtcc ggctgcagga tcttgtcgat ctggtcttcc gccttctcct
     2521 cgaccttggc ccgctcccgg gc
//
LOCUS       DASRPQ010000611         1095 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3835929, whole genome shotgun sequence.
ACCESSION   DASRPQ010000611 DASRPQ010000000
VERSION     DASRPQ010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3835929"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(184..759)
                     /locus_tag="VFD73_07200"
     CDS             complement(184..759)
                     /locus_tag="VFD73_07200"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI73805.1"
                     /translation="MLGFADETWWSRFARPHLHTWTDDTDGPLRLVEQEAPTNDPDPK
                     ALACYGVLLRQLGHAERVWLRFVDGRPVSAITEQFLGWCGTRLHEAGVRVWVLIWDNA
                     SWHISKRVRAWIRAHNRQVKQRGQGVRILTCYLPVKSPWLNPIEPKWVHGKRAIVEPD
                     RLLSAQEVADRVCVYFDCSHDVHLTIPDKAA"
     gene            complement(789..>1095)
                     /locus_tag="VFD73_07205"
     CDS             complement(789..>1095)
                     /locus_tag="VFD73_07205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73806.1"
                     /translation="KSLVKGSSRPKRTRLAFGPEQAERLRALLHRSPRDFGKPTSVWT
                     LDLAAEVSVAEGIVASRVSGETIRTTLLRLGLSWERAKHWITSPDPGYARKKGGVTA"
BASE COUNT          176 a          362 c          363 g          194 t
ORIGIN      
        1 aagaggacga tttgcgctcg ggtgcgcagc cgggcgtcgc gggtggtgcg atacagctgg
       61 tccaaggcgg tgacttcatc tgcggtcggg accggaagct ctagcgggtt tctcatcgct
      121 ccctccttcc ccaatagtct accttatccc cgcaaaagtt agttgattgt acttagtgca
      181 gaatcatgcc gccttgtcgg gaatcgtaag gtgaacgtca tgggagcagt cgaagtagac
      241 acagacgcga tccgcgacct cctgggcgct gagcagccgg tccggttcga cgatggcgcg
      301 cttgccatgc acccacttgg gctcgatcgg attgagccag gggctcttga cgggcaagta
      361 gcaggtgagg atgcgaaccc cttgcccgcg ctgcttgacc tgtcgattgt gggcacgaat
      421 ccaggcccgc acccgcttgc tgatatgcca ggaggcgttg tcccagatca acacccacac
      481 gcgcaccccc gcctcgtgca gccgggtgcc gcaccagccc aggaactgct cggtgatggc
      541 gctgaccggg cgcccatcga cgaagcgcaa ccagacccgc tcggcatgtc cgagctggcg
      601 cagcagcacc ccgtagcagg ccagggcttt cggatcggga tcgttcgtgg gcgcctcctg
      661 ctcgaccagg cgcagcggcc cgtcggtgtc gtccgtccag gtgtgcaggt gcgggcgggc
      721 gaagcgactc caccacgtct catcggcgaa gcccagcacc caatccggat gctgctgtgc
      781 gatagcgatc aggcggtcac gccgcccttt tttcgggcat accccgggtc ggggctggtg
      841 atccagtgtt tggcccgctc ccagctcagc ccgagccgca gcaaggtcgt gcggatggtt
      901 tccccgctga cccggctcgc gacgatgccc tcggccacgc tcacctcggc ggccaggtcc
      961 agggtccaga cgctcgtcgg tttgccgaag tcgcgggggc tgcggtgcaa gagggcacgc
     1021 agccgctcgg cctgttcggg cccgaaggcg agccgggtcc gcttgggccg cgaggacccc
     1081 ttcacgagcg acttg
//
LOCUS       DASRPQ010000612         2812 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4459536, whole genome shotgun sequence.
ACCESSION   DASRPQ010000612 DASRPQ010000000
VERSION     DASRPQ010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2812
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4459536"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /locus_tag="VFD73_07210"
     CDS             complement(<1..240)
                     /locus_tag="VFD73_07210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73807.1"
                     /translation="MRPRAVVGRRLMLLPIAEMAFAAAQIACAPGGASVPPLSATLAE
                     QHDLQLPGPTSHQVPSPQEGVMVGGRPGETSDSLPQ"
     gene            complement(237..2441)
                     /locus_tag="VFD73_07215"
     CDS             complement(237..2441)
                     /locus_tag="VFD73_07215"
                     /inference="COORDINATES: protein motif:HMM:NF015588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73808.1"
                     /translation="MNRRLLPVWICGVSAVLFSPLHAQREPRVDRDSSFLLYTDDPGR
                     TPSPFIGSGHIGLVLPALGIGPSFSFMSGLYEHAASDIPRIVTLPSFHSISVFNGQAW
                     LDSSAVDRKEIDAYRQVIDMRSGTARTSYHWVNRGKRMSVRVQTLVSRADPRLVALRL
                     DLAPQYTGRLSVRFAITGQPPPKRLALATIEKADPAWTPGDIWYPGHMSVRSRHVSRT
                     AGGARLSVTSQADGRPTTLAQTADIRWAKSLQNATFKTIASGDTAQAELTFYAIRGHN
                     YTFVQLTSASTGEQQGDAGAEAERHARAAGARGFESIAVASAAAWRRRWETDIQIEGN
                     PEVQQVARSMLFYLLCSADTGTGMGIPPMGLSSAGYYGHVFWDSDTWMFPTLLATHPD
                     VAHSLVAFRARTLPAARANAQANGFRGAQFPWEADDRGDETTPHFAAQNASSEIHVNG
                     DVALAQWQYYQLTGDSAWLARVGFPVIRETANFWASRASYDSAGGQYHIRNVVSVAEG
                     LIGVSDDAYTNAVARLNLEIATRASAIVKQPADRRWMEIAGKLHLPYDSTSQFFRTYE
                     GAPDSTLGDVTPLLSYPLGVAMSERAKRSQLEQAVKSLLSEGPGAMMGATLLSVDAAE
                     LGDKALLDSLLPHSYRSWLQGPFLMLSETPDKKDAVDFLTGAGGFLQQVIYGWTGLRV
                     GEKGLEPAYPPLLPSGITRLTLRNVYSRGKRYDVVVDAGGRRMVPHRPEAKR"
     gene            complement(2515..>2812)
                     /locus_tag="VFD73_07220"
     CDS             complement(2515..>2812)
                     /locus_tag="VFD73_07220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73809.1"
                     /translation="QLKADWHWVDKRPVDVKAGVSLPSYNYFNFGAGYQLSNGTTINA
                     DLLNAFQGKGLEEGNPRLVSTGPVFLARPILPRRFQVSVSYDLGGLQQQQREEP"
BASE COUNT          520 a          894 c          888 g          510 t
ORIGIN      
        1 ttgcggaaga gaatcgctgg tttcccccgg ccgcccgccg accatcactc cttcttgagg
       61 tgatggcact tgatgggaag ttggcccagg cagctgcagg tcgtgctgtt ccgccagggt
      121 tgccgaaagc ggggggacgg aggctccccc cggtgcacac gcgatctgtg ccgctgcgaa
      181 tgccatctcc gcaattggca ggagcatcaa cctccggccg accacagctc gaggtctcat
      241 cgtttggcct cgggccgatg cggtaccatt cgccgtcctc ctgcatctac caccacatcg
      301 tagcgcttgc ctcgcgaata cacgttccgc aacgtcaatc gggtgatgcc ggacggcagc
      361 agaggtggat acgccggctc gagccccttc tcacccaccc gaagcccggt ccagccgtaa
      421 atcacctgct gcagaaaccc accggcaccg gtcagaaaat ccactgcgtc cttcttgtcc
      481 ggcgtttccg agagcatgag aaagggacct tgcagccagc tccggtagct gtgcggaagt
      541 agcgaatcga ggagtgcctt gtctcccaac tccgcggcat cgaccgacag cagcgtcgcc
      601 cccatcattg cgccgggacc ttccgacaac aggctcttca ccgcctgctc cagctggctt
      661 cgcttggcgc gctcgctcat ggcgacccca agcgggtagc tcaggagtgg ggtcacatcg
      721 cccagggtcg aatcgggagc accctcatag gtacggaaga actggctggt ggagtcgtac
      781 gggaggtgca gcttgcccgc gatctccatc caccgccgat cggccggttg cttcactatg
      841 gcactggcac gggtggcaat ctccagattc agccgcgcga cggcgttggt gtaggcatcg
      901 tcgctcaccc cgatcaaccc ttccgccacc gagacgacat tccggatgtg gtactgcccg
      961 cccgccgaat cgtagctcgc gcggctggcc cagaaatttg ccgtttcccg gatcaccgga
     1021 aatccaacgc gggcgagcca cgccgagtcc cctgtgagct ggtagtactg ccactgcgcc
     1081 aaggccacat cgccgttcac atggatctct gagctggcgt tctgggcggc aaagtgcggt
     1141 gtcgtttcgt ctcctcgatc atccgcttcc caggggaact gcgcaccccg aaagccgttc
     1201 gcctgcgcgt tagcccgcgc cgccggaagc gtgcgtgcgc gaaacgctac cagcgagtga
     1261 gcaacatcgg ggtgcgtcgc gagcagggtg gggaacatcc aggtatccga gtcccagaac
     1321 acatgaccgt agtagcccgc gctggagagg cccatgggag gaatgcccat cccagtccca
     1381 gtatcagcgc tgcacagcag gtagaaaagc atcgagcgag cgacctgctg cacctcggga
     1441 tttccctcga tctggatatc ggtttcccag cgccggcgcc acgccgcggc gctcgccact
     1501 gcaatggact cgaatccacg agcgccggct gcccgcgcgt gacgctcggc ctccgcgcct
     1561 gcatcgccct gctgctcgcc agtgctcgca ctggtaagtt gaacgaaggt gtagttgtgt
     1621 ccccgaatcg cgtagaaggt gagctccgcc tgcgcggtgt cgcccgaggc gatcgttttg
     1681 aaggtggcgt tttggagtga cttggcccag cgaatgtccg ccgtctgggc caaggttgtg
     1741 ggacggccgt ccgcctgaga tgtcaccgaa agcctagctc cgcccgcggt gcgactgacg
     1801 tggcgagagc ggacgctcat gtgcccaggg taccagatat ctccaggggt ccatgccggg
     1861 tctgctttct cgatcgtggc aagggcgagc cgcttcggag gtggttgccc ggtaatggca
     1921 aaccgcaccg aaagacggcc ggtgtactgg ggggcaagat cgagacgcag tgccaccagg
     1981 cgtgggtcgg ccctggagac cagagtctgt acccggaccg acatgcgctt acctcgattg
     2041 acccagtgat agctggtccg cgcggtgccg ctcctcatat cgatgacctg gcgataggca
     2101 tcgatctctt tgcggtcgac agcactgctg tccagccacg cctggccgtt gaacacactg
     2161 atgctgtgga atgacgggag cgtcacgatc cggggaatat cgctcgccgc gtgttcgtac
     2221 aatccactca tgaaagagaa cgagggaccg atgccgagag ccggcaggac caggccgata
     2281 tggccgctgc cgatgaacgg cgacggagtt cggcccggat cgtcggtata gagaaggaag
     2341 gagctgtccc gatcgactct gggttcacgc tgggcgtgca acggagaaaa caacacggcg
     2401 gagacaccgc agatccagac ggggagcaga cgtcggttca ttctcaatcc tatagcagaa
     2461 ggcggcgggt ccgtctgggc ccgccgccga agactgccgt gagtcggcta cagctcaggg
     2521 ctcttctcgt tgctgctgct gaaggcctcc gagatcgtag gagaccgaca cctggaaccg
     2581 ccgaggcaga atgggccggg cgaggaaaac tgggccggtg ctcaccagcc tggggttgcc
     2641 ttcctcgagg cccttcccct ggaatgcgtt cagcaggtcg gcgttgatgg tggtgccgtt
     2701 gctgagctga tacccggcac caaagttgaa atagttgtag gacgggagtg aaacgcccgc
     2761 cttcacatcc actggccgct tgtccaccca gtgccagtcg gctttgagct gg
//
LOCUS       DASRPQ010000613         1791 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4459573, whole genome shotgun sequence.
ACCESSION   DASRPQ010000613 DASRPQ010000000
VERSION     DASRPQ010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4459573"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..290
                     /locus_tag="VFD73_07225"
     CDS             <1..290
                     /locus_tag="VFD73_07225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HZI73810.1"
                     /translation="GMVERFNGRIQSEVLGITVASHGDLETLLGGFNQAYNARRQRVL
                     KGRSPETVVHERLSAAPECVNPRYKPPTDPSVLPKALRVIARAKDLSHPDS"
     gene            416..1467
                     /locus_tag="VFD73_07230"
     CDS             join(416..902,902..1467)
                     /locus_tag="VFD73_07230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611416.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI73811.1"
                     /translation="MPVPLRTDFNAAALRTIARRTKDGPQARRLLALAAIYEGATRTE
                     AARIGGVTLQIVRDWVVKFNAHGPEGLVNRKPPGQPSKLTDAHRVALQAIVEQGPIPA
                     IHGVERWRLIDLIQWLWEEFRITISKQTLSRELRAMNYRKLSARPRHHAKNEAAVAAF
                     KKNFPARLEEIAQTVGGKPLEIWFADEARVGQKNKITRRWAKRGTRPSAPKDQRTQSA
                     YIFGAICPAEGKGVGLVLPRCTTEGMSLHLAEISQAVVPGAHALVLVDQAGWHQSKRL
                     VVPDNITLMPLPSKAPELNPVENIWQYMRENWISNRIFAAYSDILDHCCAAWNKLTDR
                     PWLIMSIGLRDWAHRF"
BASE COUNT          338 a          597 c          564 g          292 t
ORIGIN      
        1 atggcatggt ggagcgcttc aacggacgca tccaatccga ggtgctgggg atcacggtgg
       61 ccagccacgg cgatctcgag accctgctgg gaggcttcaa ccaggcctac aatgctcgac
      121 gtcagcgggt gctgaagggc cgatcaccgg agacggtcgt ccacgaacgc ctttccgctg
      181 cgcccgaatg cgtcaaccca cgctataagc cgcccaccga cccttccgtc ttgcccaaag
      241 ccctccgggt gatcgcaaga gccaaggacc tctcgcatcc agacagctaa gccagacatc
      301 ccggcctaat cagccggaaa ccgtatcata ccaagtccct caaggggtga ctcgtttggg
      361 tctggtgggt ttgaggcggg tctgatctca aggtggcgaa caagggaggt tcgccatgcc
      421 ggttccgctc cgcactgact tcaacgccgc cgccctgcgc acgatcgccc gtcggaccaa
      481 ggatggccca caagcgcggc gcttgttggc gctggccgcg atctatgagg gggcgacccg
      541 caccgaggcg gcccggattg gcggggtcac gctgcagatc gtgcgcgact gggtggtgaa
      601 gttcaacgcc cacggacccg agggcctggt caaccgcaag ccgcccggcc agccgtccaa
      661 gctcaccgat gcgcatcgcg tggccctgca agccattgtc gagcaagggc ccatcccggc
      721 catccacggc gtggagcgct ggcgcttgat cgatctgatc cagtggctct gggaggagtt
      781 ccgcatcacg atctccaagc agaccttgag ccgggagctg cgggccatga actatcgcaa
      841 gctctcggcc cgtccgcgcc atcacgccaa gaacgaggcg gcggtggccg cttttaaaaa
      901 aacttcccgg cccgtctgga ggagatcgca cagacggtgg gtggcaagcc cttagagatc
      961 tggtttgcgg acgaggcccg ggtgggccag aagaacaaga tcacgcggcg ctgggccaaa
     1021 cggggcaccc gcccttcagc cccgaaagat cagcgaaccc agtcggctta catcttcggc
     1081 gcgatttgtc cggcggaggg gaaaggcgtg ggtctcgtcc tcccccggtg tacgaccgag
     1141 ggcatgagcc tgcacctcgc cgagatctca caggcggtcg tgcctggcgc gcatgccctc
     1201 gtcctggtgg accaggcggg ctggcatcag tcgaagagac ttgtggtccc cgacaacatc
     1261 accctcatgc cgctcccgtc caaggcaccc gagttgaacc cggtggagaa catctggcag
     1321 tacatgcggg agaactggat ctcgaaccgg atcttcgccg cttacagcga catcctcgat
     1381 cactgctgcg cggcgtggaa caagctcacc gatcggcctt ggctcattat gtctatcggc
     1441 ctgagagact gggcccatag gttctgatca ccgggacttg gtattagcgc ttgccgacag
     1501 ctacgtccaa gctgccggcg cacgggccac cgaacgtgcc cacgacagcg acttcgccga
     1561 cttcggacca agagcggcac gcccgcagct agccgcttag gggttgaccg cgtacccctc
     1621 ttggtccata gctcaatctc caaaggagcc ccgccagcgc acagcgccgg cggggcttcg
     1681 cgtttctggc ccggcgccaa gatccccgaa cagcgagagg acgaatgtga gcgccgccga
     1741 gctgcgagcg ctggcaggag cgcgtctgtc gccggcctcg ccgcgatccc g
//
LOCUS       DASRPQ010000614         1007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_387038, whole genome shotgun sequence.
ACCESSION   DASRPQ010000614 DASRPQ010000000
VERSION     DASRPQ010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_387038"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(543..869)
                     /locus_tag="VFD73_07235"
     CDS             complement(543..869)
                     /locus_tag="VFD73_07235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73812.1"
                     /translation="MACQVGPWVIVVAVVLTRTDTSHLAFGHGIHHCLGARLARLEGV
                     IALTTLHGRFPAMRLAVPPSALRLGHGDGLVLRGLTELPVILNPKANRYDPQGHLASG
                     IPSRHT"
BASE COUNT          181 a          320 c          331 g          175 t
ORIGIN      
        1 cgcgcgctac ggtcccctcc ctcacgccac gatgcctggc gcctgactgc gcacaccgag
       61 cctaacccga tcacgtgccg cagggtagtg gcggcgggga tcccgctgcc cgccaccata
      121 ggctatacat cagcggggac aaccacagcg gcccaaggca gccctgcgca agtcgcctac
      181 ctaatgggcc gcctcgttgc gaggtcgtgg tggccacgac cgcacgcgaa caaatgatgt
      241 gagtggtggc cgacgggggc gagtgccgac tcgctcacat gaccgaaaat agctaccgcc
      301 tgggtgcata tctatgtagg aagttgaata ctcactcacg ttctccacct tcccggtgat
      361 cgccctaaag ccttttccgt cgttccggca ggaaatcagg tcgccgaata ttttcgctcg
      421 cacagcgaca aaagccggct ggacggccgc aaccagatcg tctggttctg tatggtttgg
      481 ggacgcgctc agttgcacgt cgttgactgt ccctccgctg tgccgtaagg ggctgttccc
      541 gcttacgtgt gccgtgaagg gattccgctg gcgagatgac cctgagggtc gtagcggttc
      601 gctttcgggt tgaggatgac cggtagttcg gtcaggccgc gtaggacaag tccgtcgccg
      661 tggcccaagc gcagcgctga gggtgggacg gctagccgca tggcggggaa gcggccgtgc
      721 agggtggtga gcgctatcac cccctcgagc cgggccagcc gggcgcccag gcagtggtgg
      781 atgccgtggc cgaaggccag gtggctggtg tcggtccggg tcaggacaac cgccaccacg
      841 atcacccacg gcccgacttg gcaggccacc agagtccgga acgtgaacca ggcgcatcgt
      901 tgaccaagcc aagatcaccc ggggcttcgc tcgacgccgg atctacgggt cagggaccca
      961 ttgatggccg ctcaggagcg tcagctgagt acgatcggcc catccgg
//
LOCUS       DASRPQ010000615         1450 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2264979, whole genome shotgun sequence.
ACCESSION   DASRPQ010000615 DASRPQ010000000
VERSION     DASRPQ010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2264979"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            578..1150
                     /locus_tag="VFD73_07240"
     CDS             578..1150
                     /locus_tag="VFD73_07240"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZI73813.1"
                     /translation="MAHVADHLSVSALEQQYRSCTNVTAARHLQTIWLLAKGHEVAEV
                     AATVSYAQCWVERLLARYNAQGPQALGDLRRRNGTSPSILRPDLLEKLKARLREPPPD
                     GGLWTSPKVAAWMAGELGLAAVLPQRGWEALKAIGWTVQKPRPRHPAAATPEEREAFK
                     KSSSRPSLRREPSTRTSRSRSGPPTSTASA"
     gene            1168..>1450
                     /locus_tag="VFD73_07245"
     CDS             1168..>1450
                     /locus_tag="VFD73_07245"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI73814.1"
                     /translation="MWAPKGQRPIALGHHRYKWLYVTAFVQPISGEVFWYISNGVSKP
                     FFAARLALFAREAGAGRDRIVVLGLDGAGWHTEPNLAVPGGIRPVYLPPY"
BASE COUNT          255 a          455 c          488 g          252 t
ORIGIN      
        1 aagatcatga ctgacttctg gttggcttgg gggagcggct ggaagactgc gaggttcggc
       61 atagctacct cagtgaactc tgcttctcac tctgcgctca tgtggttaaa ggcggtttaa
      121 tccagagaaa ttccccactc cgctgcccat gggcagaatt ctaggtcaag tgcaattgct
      181 cgtccgaagg agtacgtgtg tctgccgcgg gtctatgtgg ggccgcggag cgcctttcat
      241 tgacttcgcg ccgcgttgca ggcgtcatgg tcacaaccgg cctgattggc tccatcgagt
      301 cggccgggac gcaaggagat gcactcgccg cgataatgac ctgaaaagcc aacggccccc
      361 ggagcgccaa ctccagaggc cgtcgaaatc ataggggctt tcgccttcag tcaatcgcga
      421 aagtctcata gctcccgccc gggagtcaag tcggaacgcc aattccgacg acgatgaggc
      481 ttggtctgat acggactccg gctgaagggg tcggcaggga ttcccgacgg ttggggctga
      541 ggctagactg aagcgccagg agtcgcggag gcgaaccatg gcgcatgtgg ccgatcatct
      601 gagcgtttca gctctggagc agcaataccg gtcctgcacg aacgtgaccg cggcgcggca
      661 ccttcagacc atctggcttc tggccaaagg ccacgaggtt gccgaggtcg cggccacggt
      721 gtcgtatgcg cagtgctggg tggagcgctt gctggcccgc tacaacgccc agggcccgca
      781 ggctctgggt gatctccgac gccggaacgg gacgagcccg tcgatcttga gaccggacct
      841 gctggagaag ctcaaggctc gcctgcgtga gcccccgccc gacggtggcc tgtggaccag
      901 ccccaaagtg gcggcctgga tggcgggcga actcgggctg gctgcggtgt tgccccaacg
      961 tggctgggag gccctgaagg cgatcggctg gaccgtgcag aagccccgcc cccgccaccc
     1021 tgccgcggcc acgcccgagg agcgggaggc gttcaaaaaa agctcgagca ggccgtcgct
     1081 gaggcgagag cccagcaccc ggacaagccg atcgaggtct gggccaccga cgagcaccgc
     1141 atcggcctaa agccgatcct ccggcgggtg tgggcgccca aaggccagcg gccgatcgcg
     1201 ctgggccacc accgctacaa gtggttgtac gtcaccgcct tcgtccagcc gatctcgggc
     1261 gaggtgttct ggtacatctc gaacggggtc tccaagccgt tctttgccgc gcggctggcg
     1321 ctgtttgccc gcgaggccgg ggcgggacgg gatcgcatcg tcgtgctcgg gctcgacggc
     1381 gccggctggc acaccgaacc gaacttggct gttccgggtg ggatccggcc cgtctacttg
     1441 cccccgtact
//
LOCUS       DASRPQ010000616         1234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1011142, whole genome shotgun sequence.
ACCESSION   DASRPQ010000616 DASRPQ010000000
VERSION     DASRPQ010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1234
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1011142"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..473
                     /locus_tag="VFD73_07250"
     CDS             <1..473
                     /locus_tag="VFD73_07250"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73815.1"
                     /translation="SIVFKEFGIRLRFTPTITRNGSIRLKVMPEVSALDFSNPLVFGG
                     FTIPSLLTRRAETEVEMQSGQYLAIAGLVDNRLTNNSTKIPVLGDIPILGQFFRSKDA
                     RQNRTELLVLVSPKLVQPSNTPALLPTGEPASWGFKGNMKIQPSDSTARGYQEH"
     gene            482..>1234
                     /locus_tag="VFD73_07255"
     CDS             482..>1234
                     /locus_tag="VFD73_07255"
                     /inference="COORDINATES: protein motif:HMM:NF024792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein TadG-related protein"
                     /protein_id="HZI73816.1"
                     /translation="MKRGMSERHRERGVTLVMMALTMFLALSMSALAVDYGMIKAAKA
                     EAQRATDAAALAGASAFLIPDPTVDKAAEATTRARDYAKKHTVHSVQVTDAEVGVVVD
                     TSKQMVTVTYTGAGIPLWFAQIMGFSSMGINSISAAHVYQTSDAACVMPVAIPDLWQN
                     NDINGPRNGPPEELGTPDGLWSYQDLNHNGWMDPGSGNTVERELWEFDPGIDRYDTNG
                     DGQGDWGYGTSARNNLGGSNPFLHKTNDYGRQI"
BASE COUNT          269 a          374 c          374 g          217 t
ORIGIN      
        1 tgtcgatcgt gttcaaggag ttcgggatcc ggctcaggtt cactcctacg atcacccgca
       61 atggcagtat acggctgaag gtcatgcctg aggtctccgc actcgatttt tccaatcccc
      121 tggtctttgg cggcttcacc atcccgagcc tgctcacccg cagggccgag accgaggtcg
      181 agatgcagag cgggcaatac ctggccattg ccggcctggt cgacaaccgt ctgacaaaca
      241 actccaccaa gatcccggtg ctgggcgaca ttccgatcct gggccaattt ttccggtcca
      301 aggacgcccg ccaaaatcgg accgagctgc tcgtcctggt ctcccccaag ctggtgcagc
      361 ccagcaacac cccggccttg ctgccgacgg gagaacctgc atcttggggg tttaagggca
      421 atatgaaaat ccagccgtct gatagcacgg caagagggta tcaggagcac taggaggaca
      481 tatgaagcga gggatgtcgg agcggcaccg cgagcgggga gtcactctgg tcatgatggc
      541 gctcaccatg tttctcgccc tcagcatgag tgcgctcgcc gtggattacg gcatgatcaa
      601 ggctgccaaa gccgaggccc aacgggcgac cgatgccgcg gctctggcgg gagcgagcgc
      661 attcctgatc cctgacccca cggtggacaa ggcggccgaa gctaccacgc gggcgcgaga
      721 ctatgccaag aagcacacgg tccacagcgt tcaggtcacc gacgcggaag tcggggtggt
      781 cgtcgacacg tcgaagcaga tggtgaccgt cacgtacacc ggagccggca taccgctctg
      841 gtttgctcag ataatggggt tcagcagcat ggggatcaat tccatctctg cggcccacgt
      901 gtaccagacc agcgacgcgg cctgcgtgat gccggtagct atccctgacc tctggcagaa
      961 caacgacatc aatggcccca gaaacggccc tcctgaagag ctgggcacgc ccgacgggct
     1021 ttggtcgtac caggatctga atcacaacgg gtggatggac ccgggaagcg gcaacaccgt
     1081 agaacgcgag ctttgggaat tcgatccggg catcgaccgc tacgacacga acggcgacgg
     1141 tcagggcgat tggggatatg gtacctctgc caggaacaac ttgggaggca gcaacccctt
     1201 cttgcacaag actaatgatt acggccggca aatt
//
LOCUS       DASRPQ010000617         1122 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_699893, whole genome shotgun sequence.
ACCESSION   DASRPQ010000617 DASRPQ010000000
VERSION     DASRPQ010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_699893"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(497..>1122)
                     /locus_tag="VFD73_07260"
     CDS             complement(497..>1122)
                     /locus_tag="VFD73_07260"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZI73817.1"
                     /translation="TPMARARKPEKWGQYLSHMTDHRSVRQIVAAGIGVNHTTVWRWR
                     HRFLKAAAQDNTAILSGVIEADETFFARSCKGHRGWVKGRPPEPRAARPRAWGATKRG
                     LSGEQVPVLTALDNAGGVYEAVLPSLSTIEAALDGRIAAGSVVCSDGVAAYVKAAVKA
                     GAEHRRVVVPTITPVAVKVAPVPTKRRRKGRLGLGRVNAHHGQIKGL"
BASE COUNT          200 a          357 c          343 g          222 t
ORIGIN      
        1 gctaattagc ccgggagaaa cttacatatt tcaggcaaga gtggatacac gcgggcgttt
       61 tgaacatttt ccaagattag tttttgacgt tgatccgcgg acaccgccag tgggcacctt
      121 agggcaggtg tacacgtatg caagagcata tgaacttgaa gctggagctt ctactctgat
      181 aaaccgttca gggcagattt ttcaccacac tcatgaggta gtagggtcag ctgacacagt
      241 agacgtacaa agattcgatc ttattggcca acctgttgag ttgcggttta ctccttcgcg
      301 ctctcgtgta tttatagagg tatctatatg gcgcagttcg acttgggtgt ggggatggcc
      361 acggtagact gcacgttgag ctacgccagc gcccgatcca gcagtgccgt tccggtgaag
      421 cctgtgcgca gcatcgcccg gtgccaaccg agatagttgc cgagataccc ggtcgccacg
      481 ccacggcagc gcacgttcac agtcccttga tttggccatg gtgcgcgttc acccgcccga
      541 gcccgagacg gccctttcgc cgccgcttgg ttggtaccgg agcgaccttc accgccacag
      601 gcgtgatggt cggcaccacc acccggcgat gctcggcgcc cgccttcacc gccgccttca
      661 cgtaagccgc cacaccatcg gagcagacca ccgacccggc ggcgatccgg ccatccagcg
      721 ccgcctcgat ggtgctcagc gatggcagga cggcttcgta gaccccgccc gcgttgtcca
      781 gggcggtcag cactggcacc tgctcgcccg acaggccccg cttggtggcg ccccaggcac
      841 gcgggcgcgc ggctcggggc tcggggggcc tgcccttcac ccatcctcgg tgccccttgc
      901 aggagcgggc gaagaacgtc tcatcggcct cgatcactcc ggagaggatc gccgtgttgt
      961 cctgtgcggc agccttgaga aagcgatggc gccagcgcca gaccgtggtg tggttcaccc
     1021 cgatcccagc cgcgacgatc tgcctgaccg agcgatggtc ggtcatgtgg gacagatact
     1081 ggccccactt ctcgggcttg cgggcgcggg ccattggcgt gc
//
LOCUS       DASRPQ010000618         1205 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3518145, whole genome shotgun sequence.
ACCESSION   DASRPQ010000618 DASRPQ010000000
VERSION     DASRPQ010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3518145"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..740)
                     /locus_tag="VFD73_07265"
     CDS             complement(<1..740)
                     /locus_tag="VFD73_07265"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RecQ family ATP-dependent DNA helicase"
                     /protein_id="HZI73818.1"
                     /translation="MEDDLVPARALLQHHFGYPDFRPSQGPVIRSVLQGHDTLAVLPT
                     GGGKSICFQIPAVLLGGLSIVVSPLISLMQDQVESAQARGLAADCLNSSLGVAAQREV
                     RDRISGGLLRLLYVSPERLEKLTLELERQHIRPHLLVVDEAHCITEWGHDFRPSYRKL
                     ARLRYRLGQPQAVALTGSATSEVRSDIIRMLRFRRDHRLHLGSFDRSNLWFGALRVRS
                     ERERMQALLDLLRGQDQLAIVYAPTRGAT"
     gene            complement(849..>1205)
                     /locus_tag="VFD73_07270"
     CDS             complement(849..>1205)
                     /locus_tag="VFD73_07270"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HZI73819.1"
                     /translation="NYAQFGLEAESPTGSFDVNQRFIYGTGNVVYRFQKSPMGRLRPY
                     VIGGIGVYNSKGTGKDAALFGNTSATNFGVNVGTGFDYRVAGATLFLEARFHNIFSDP
                     SNTQYVPVTAGLKFGG"
BASE COUNT          237 a          368 c          387 g          213 t
ORIGIN      
        1 gtagctccgc gcgtgggcgc atagacaatg gcgagctggt cctggccccg cagcagatcg
       61 agcagtgcct gcattcgttc ccgctcgcta cgcacgcgca gtgcgccgaa ccaaagattg
      121 ctgcggtcga acgagccgag atgaagccga tggtcgcgac ggaatcggag catgcggatg
      181 atgtcgctcc tcacctccga tgttgcgctg ccggtcagcg ccactgcctg gggctgtccc
      241 agccgatacc ggaggcgagc cagcttccgg tagctcggcc ggaaatcgtg cccccattcc
      301 gtaatgcagt gcgcctcatc gaccaccagc aggtggggcc gaatgtgttg gcgctccagc
      361 tccagcgtga gcttttccag gcgctccggt gaaacgtaga gcagccgaag caggccaccc
      421 gagatccggt cccggacctc gcgttgcgcg gcgaccccca ggctgctgtt gaggcaatcg
      481 gccgccagcc cacgggcctg cgcagactcg acctgatcct gcatgagcga gatcagaggg
      541 gagaccacaa tgctgaggcc ccccaggagc actgccggta tctgaaagca gatcgatttg
      601 ccgccgccgg ttggcagtac cgcgagtgta tcgtggccct gcaggaccga gcgaatgacc
      661 ggaccctggg agggacggaa atcgggataa ccaaagtggt gctgcagcag ggcgcgagca
      721 gggacgaggt catcttccat ccctccaaca tcgacgccag tcgaatcaga ggggtgtcgt
      781 gctttggcga gacgggctag aaaaatgccc agctgtgagc tggggccttg ggtaagagaa
      841 cggcttcgtc agccgccgaa cttgagtccg gccgtcacgg ggacgtactg agtgttcgat
      901 ggatcgctga agatgttgtg aaaccgcgcc tccaggaaca gcgtcgcacc ggccactcgg
      961 tagtcgaatc cggtgcccac gtttactccg aagttggtag ccgatgtgtt cccgaagagc
     1021 gccgcgtctt tgccagtgcc cttcgagtta tacaccccga taccgccgat gacataggga
     1081 cgcagccgtc ccatgggcga tttctgaaag cggtagacca cgttcccggt tccatagatg
     1141 aaccgttgat tgacatcgaa ggagccggtg gggctctccg cctccaatcc gaactgggcg
     1201 tagtt
//
LOCUS       DASRPQ010000619         1348 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3214005, whole genome shotgun sequence.
ACCESSION   DASRPQ010000619 DASRPQ010000000
VERSION     DASRPQ010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1348
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3214005"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..341)
                     /locus_tag="VFD73_07275"
     CDS             complement(<1..341)
                     /locus_tag="VFD73_07275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73820.1"
                     /translation="MSGDVASLAAEMTPYVSAAVGAYGGAVLARVRDDAADATVGLGR
                     RLLQRGFGVRDEREPLPGPLAELAADPRDEDARTAVRLAVRKALAGDPVLEAEVRSML
                     AVAGVSQQVQAA"
     gene            765..844
                     /locus_tag="VFD73_07280"
     tRNA            765..844
                     /locus_tag="VFD73_07280"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:797..799,aa:Tyr,seq:gta)
BASE COUNT          244 a          461 c          415 g          228 t
ORIGIN      
        1 gccgcttgca cctgctggct cacgccagcg actgcaagca tcgaccggac ttccgcctcg
       61 agcaccgggt caccggccag cgccttgcgg accgccagcc ggaccgccgt ccgcgcatcc
      121 tcatcgcgtg gatcggcggc cagctccgcg agaggccccg gcagcggttc cctctcatcc
      181 ctgaccccga aaccccgctg cagcaggcgg cggcccaggc caaccgtcgc gtctgccgcg
      241 tcatcccgca ccctcgccag cacagccccg ccataggcac ccaccgcagc cgagacatac
      301 ggcgtcatct ccgccgccag cgaggcgaca tccccgctca cgcaaaccct cccggcagtc
      361 agccgcgcta gctcaaattc cgtcctacta accgtaatga caccatcacg atgcacgcta
      421 ggacaatttg cccgccattc agggctcgat tggctgttca ctagcagcca gaacacgtgc
      481 acggcggggc ggaacccgaa ctggacgacg cgcgagatca actgatcact gcaagctact
      541 tgtggcccgg cgttaccggg agaggtcggc tgaatcgccg ggcgcggagt cgcgcagtgc
      601 ggcctgcttg gcgggaagcg agcggtcggt gtaaccgctc ccatcccggc cgtccgtggc
      661 caggcgttct cctgtccgtg ggtttccgga accggggcgc acggacgctc agcggacggc
      721 ggtggcctag gaacgtgcct tgcagcgcat atccactggt cagcggcgtt taactcggat
      781 agaaggagag cggtctgtaa aaccgtcggc tcagcctacg ttggttcgaa cccaacacct
      841 gccacacgct gcgaaaacgc cccgctagct gcgatatctc gcgctagcgg cgcgtttcgt
      901 ctctgtcccg ccgtgtgtca ccttgtcgcg ctgtagaccg tcatattgcg ctgtccacgg
      961 acgcatagcg gacggggtgc gtgctataag gacggtcggt gtgcgcagtt acgacggtcg
     1021 gtgtgcacag ttgtggtggt cggtgtgcac cgtcggcgtt tccacggacg gccacggacg
     1081 ggccgcgcca gcggcgtgtc gtggcttgaa gcgctcctca gccggaaggt tgagagacgt
     1141 gacaaggggc gatgaccagt gtcgttgcac ccgcggatta agagtccgct gctgtgttca
     1201 aggattcccc gttactacct gcgccttcac gcccgtacca gcgaagatac gtccctgaca
     1261 tgcagaaatc tgtaccggaa aatgacggct gctgccagcc cgtaccagga catctgagca
     1321 aacatggagc gaacacggaa cccgtgtg
//
LOCUS       DASRPQ010000620         1169 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2892720, whole genome shotgun sequence.
ACCESSION   DASRPQ010000620 DASRPQ010000000
VERSION     DASRPQ010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1169
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2892720"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..804)
                     /locus_tag="VFD73_07285"
     CDS             complement(<1..804)
                     /locus_tag="VFD73_07285"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: protein motif:HMM:NF013327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HZI73821.1"
                     /translation="MSDQPSAAPSPAPPAGPKPPAPSKAQVFARRLLSTAILWGVVLG
                     GMFSGHKVVSDYVFIIIMTVLAVVGLLEFYGLVEKEGMVCFKALGVMGGVILMVGTFL
                     KLQGLFGLHDTPARVNDFENIVLILFVLGLCFRQFLAKSNTKGILAISTTLFGLLYVP
                     WLLNFIQKIQFFPAIDDNGKFYVLYFILVTKFSDTGAYLVGSLIGRHKMIPRISPGKT
                     WEGFGGAIFASVLASLLFTRAFQERMHGMTWYHALILGVMLSVGAVVGDL"
BASE COUNT          218 a          358 c          402 g          191 t
ORIGIN      
        1 cagatccccc accaccgccc ccacgctcag catgacccca aggatcagcg cgtgatacca
       61 ggtcattccg tgcatccttt cctgaaacgc gcgtgtgaag aggaggctcg ccagcaccga
      121 ggcaaaaatc gcgccaccga atccctccca ggttttgccc gggctgatgc gggggatcat
      181 cttgtggcgc ccgatcaagg acccgaccag gtaggcgccg gtgtcgctga acttcgtcac
      241 caggatgaaa tagagaacgt aaaactttcc gttgtcgtcg atggccggga agaactggat
      301 cttctggatg aagttcagca gccaggggac gtagagcagc ccgaacaagg tggtggagat
      361 ggccaggatg cccttggtgt tgctcttggc caggaactgc cggaagcaaa gccccaggac
      421 gaacaggatg aggacgatgt tttcgaaatc attgacccgg gccggcgtgt cgtgcagccc
      481 gaacagccct tgcagcttca ggaaggtgcc gaccatcagg atgaccccgc ccatcacgcc
      541 cagggccttg aagcaaacca tgccttcctt ctccaccagg ccgtaaaact ccagcaggcc
      601 gaccaccgcc aaaacggtca tgatgatgat gaacacgtag tcggagacca ccttgtgccc
      661 cgagaacatc ccgcccagga ccacgcccca gaggatggcc gtgctgagca ggcggcgggc
      721 aaacacctgg gccttggaag gcgcgggcgg cttcgggccg gccggcgggg ccggggatgg
      781 agccgctgat ggttggtcgg acatggggcg aaacgctatc gagcccgcgg ggcgtgtcga
      841 gcgcttttag ccggcccttc gtcgtgctga gtcgtgctga gtcgtgctga gccgcgctgg
      901 gcaggctggg tctgcccggt gcagctcgag gtgatcggtg gcgcgcgccc ggtccccggg
      961 cgcagcggtg tgagccggag acgatgctgg caggctccga cgactgcggc cgatgggatg
     1021 tgctgcgggc ggggaccgcc cgcgccccga ccggataggt gaaacgagcg accatcggtg
     1081 gttgccctgg ggttgccctg gggtgggcct ggggcgggct ggggcgggcc gcgttttcgt
     1141 tgcctcgctt gacacaccgc agggcaatc
//
LOCUS       DASRPQ010000621         1406 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1960192, whole genome shotgun sequence.
ACCESSION   DASRPQ010000621 DASRPQ010000000
VERSION     DASRPQ010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1960192"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(429..>1406)
                     /locus_tag="VFD73_07290"
     CDS             complement(429..>1406)
                     /locus_tag="VFD73_07290"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZI73822.1"
                     /translation="IHHLASRPRDYHWVLEADIAACFDEIGHVPLLDRVRARIKDKRV
                     VALVRAFLKAGILTKFGDREETRAGTPQGGPLSPLLANIALSVLDEHFDQQWQELMGT
                     QNQRTRRRKNGLGTWRLIRYCDDFVVMVHGERRHAEVLREEVADVLATLGLRLSPEKT
                     RVVHIDEGFDFLGMHIRRMRKRGTSRHYVYTKPSRKAIQAIKDKVKAKTYRSTRHMGL
                     DELITSLNRSLAGWANYFRYGVSKAAFSAIDHFTWGRLMRWTRARYAGKHRLGMTALR
                     RRFCDQEWRFACNGVVFTGASSVAVTRYRYRGSNIPTPWTPEPAAATSS"
BASE COUNT          229 a          452 c          440 g          285 t
ORIGIN      
        1 aggccctgca agaacaggca gcctgagatg cccgcgcttc cccgctgcca acgatcagcc
       61 ggcgcccggt cctgtccagg tcgttcctgc ctggacatga cctgcgctcc ggcggaatat
      121 ggcagctacc gggaagcacg gacaggcacg atcagccaat tcgaagtgtc cacgcttcca
      181 ggggaacccc ggaggtaccg cagaccagtg gtaacggagc gccgagagta cgtggtttat
      241 gccccgatga acatctagtc gcacgagcga cagattagcc ctcagcacag ctcgcacggg
      301 cccacgtggt gaggtagacc tgcgggcgcg gttctggtgt tgctaccggt ccgtttcccg
      361 caggtcccct cccgcacccg gcgtgcgcct ttcagcgcac cgggcgctcc gcgtgtcttg
      421 cccgctggtc agctgctggt ggcggctgct ggttccgggg tccatggggt cgggatgttg
      481 ctgccgcggt agcggtagcg tgtcacggcg acgctggatg cgccggtgaa gacgaccccg
      541 ttgcaggcga atctccactc ctggtcgcag aagcggcggc ggagtgctgt cattccgagc
      601 cggtgtttcc ccgcgtacct ggcacgtgtc cagcgcatca gccgacccca ggtgaagtgg
      661 tcgatcgcgc tgaatgctgc cttggagact ccgtaccgga agtagttcgc ccaccccgcc
      721 agtgaccggt tcaggctggt gatcagctca tcgaggccca tgtggcgggt tgacctgtac
      781 gtcttggcct tcaccttgtc cttgatcgcc tggatggctt tccgggacgg cttggtgtag
      841 acgtagtgcc tactcgttcc tcgtttgcgc atcctgcgga tgtgcatccc gaggaagtcg
      901 aagccctcat cgatgtggac cacgcgggtc ttctccggtg acaggcgtaa ccccagtgtt
      961 gcgagaacgt ccgccacctc ttcgcgcagg acctcggcat gacgtcgttc accgtgcacc
     1021 atgacgacaa agtcatcgca gtagcggatt agacgccatg tgcccaggcc gttcttcctg
     1081 cgccgtgtcc gctgattctg ggttcccatc agttcctgcc actgctggtc gaaatgttcg
     1141 tccagcaccg atagggcgat gttcgccagc agcggggata gtggcccgcc ttgcggggtc
     1201 ccggcgcgtg tctcttcccg atcaccgaac ttggtgagta tcccggcttt caggaacgcc
     1261 cgtaccagtg ccaccacacg cttgtcttta atcctggccc gcacccgatc gaggaggggc
     1321 acatgtccga tctcgtcgaa gcaggccgcg atatcggcct ccagaaccca gtgatagtcc
     1381 ctgggtcggg atgccaaatg gtggat
//
LOCUS       DASRPQ010000622         1458 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4460763, whole genome shotgun sequence.
ACCESSION   DASRPQ010000622 DASRPQ010000000
VERSION     DASRPQ010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4460763"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..855)
                     /locus_tag="VFD73_07295"
     CDS             complement(<1..855)
                     /locus_tag="VFD73_07295"
                     /inference="COORDINATES: protein motif:HMM:NF023697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3618 domain-containing protein"
                     /protein_id="HZI73823.1"
                     /translation="MSQYEPREPELAYEAADQGFSSDTESRSDRSPEEIEREIERTRD
                     RMSRNIDELGDRLSPSNLKEEAKSAIKDAAQGAVSNVGEQARRTSSRLVEVIRENPLP
                     VIAVGAGVTWLLTQRSRSDVSGDRMARYAYTGPERRQGHGIKNRVGNMVSEVKDSVSE
                     AAGGVSERAGELKEQAGDRIEDWGQQARWQSRRLKTNLEHAAEENPLALAIGAAVVGL
                     ALGLLLPETQRENELMGPARDQLVDRAEETVERAKDAAVEAGREVKDTVKSEFEQHKP
                     EMKEMVEQA"
     gene            complement(852..1253)
                     /locus_tag="VFD73_07300"
     CDS             complement(852..1253)
                     /locus_tag="VFD73_07300"
                     /inference="COORDINATES: protein motif:HMM:NF018980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HZI73824.1"
                     /translation="MPELRQQERSIGELFGQLTQDMTLLVRQEIQLARTEMSDKLSRF
                     STNLISVLAGGFVAYLGGLALVACVILALRDLANISLAVSALIIGAILAIIGWIMLQR
                     GLKEMKRVDLAPRRTVETLKDDVQWAKEQRS"
     gene            complement(1240..>1458)
                     /locus_tag="VFD73_07305"
     CDS             complement(1240..>1458)
                     /locus_tag="VFD73_07305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73825.1"
                     /translation="GLIGARFLKSSERRGSRRYGDGRQYSGERRFGYTGSNQPYSRGT
                     GIEQSTSVRGGYGHPGTESGTGGGYAGA"
BASE COUNT          212 a          504 c          423 g          319 t
ORIGIN      
        1 tgcctgctcc accatctcct tcatttccgg cttgtgctgc tcgaattccg acttgaccgt
       61 gtccttgacc tcgcgtccgg cttcgacggc ggcatccttg gcccgctcta ctgtttcttc
      121 ggcccggtct accaactggt ctctggccgg tcccatcagt tcgttctcac gctgggtttc
      181 aggcaacagc agtcccagtg ccaatccgac aacggccgcc ccgatggcca gcgcgagcgg
      241 gttctcctcc gcagcgtgct cgaggttggt cttgagccgg cgtgactgcc agcgggcctg
      301 ctgtccccaa tcttcaatcc ggtcaccggc ctgttccttg agctcacctg cacgctcgga
      361 caccccgccg gcggcttcgc tcaccgaatc cttcacttcg ctcaccatat tgccgacgcg
      421 gttcttgatt ccatggccct gacggcgctc cggcccggtg tacgcgtacc gcgccatcct
      481 atccccggac acgtcgcttc gagaccgctg ggtcaagagc caggtgacgc cggctccgac
      541 cgcgatgacc ggtagcggat tctcccggat gacttcgacc agccgggagc tggtgcgacg
      601 cgcctgttct ccgacgttgg agacggcgcc ttgcgccgca tccttgatgg cgctcttggc
      661 ttcttccttc aggttgctgg ggctcaaccg gtcccccagc tcatcgatgt tccggctcat
      721 ccgatcgcga gtgcgttcga tctcgcgctc gatttcctcc gggcttctgt cgctgcgcga
      781 ctcggtgtcc gagctgaatc cctgatcggc cgcctcgtag gcgagctcgg gctctcgtgg
      841 ttcatactgg ctcatgaccg ttgctccttt gcccactgga cgtcgtcttt gagggtttca
      901 accgttctgc gaggggcgag atctacccgc ttcatttcct tcaatccgcg ctgcagcatg
      961 atccagccga tgatggcgag gattgccccg atgatcaggg cggagaccgc aagcgagatg
     1021 ttggcgagat ccctgagcgc cagaatcacg caggcgacca gggccaagcc accgaggtag
     1081 gcgacgaatc cgcctgccag taccgagata aggttggtgc tgaaacggga gagcttgtcg
     1141 ctcatctcgg tgcgagcgag ctgaatctcc tgtcgcacca agagtgtcat gtcctgggtg
     1201 agctgcccga acaactcacc aatgcttcgc tcctgctgcc taagctccgg catagccgcc
     1261 tcccgttccg ctttcggtgc cggggtggcc gtatccgcct cggaccgaag tgctctgctc
     1321 gatgccggtg ccacggctat agggctggtt ggatccggta tacccgaagc gccgttcccc
     1381 actgtactgc cggccgtcgc cgtaccggcg actgccgcgc cgctcggagc tcttcaggaa
     1441 ccgggcgcca atcaggcc
//
LOCUS       DASRPQ010000623         1413 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_388242, whole genome shotgun sequence.
ACCESSION   DASRPQ010000623 DASRPQ010000000
VERSION     DASRPQ010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1413
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_388242"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1009)
                     /locus_tag="VFD73_07310"
     CDS             complement(<1..1009)
                     /locus_tag="VFD73_07310"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase/maturase family protein"
                     /protein_id="HZI73826.1"
                     /translation="MQDAAVVLSVLRERGRKGLPLTQLYRQMFNKKLYWLAYGNIYSN
                     QGAMTPGASEGTADGMSEGTIGQIIELMRYERYRFSPARRIYIPKKNGKLRPLGLPSW
                     SDKLVGEVVRLLLEAYYEPQFSDHSHGFRKGRGCHTALREIRDFWKGTTWFIEGDISD
                     CFGSLDHEVMAGILAEKIHDQRFLRLIRHMLKAGYLEDWEYHDTLSGVPQGGVASPVL
                     SNIYLNKLDEFVERELIPRYTRGASRKRNPEYMRIRHRREKARRHGDRAAARDLLRAM
                     RTLPSVDPMDPGYRRLRYLRYADDHLLGFTGPKAEAEQIKAELTRFLRETLRLELNQD
                     KT"
BASE COUNT          213 a          462 c          432 g          306 t
ORIGIN      
        1 gggtcttgtc ctggttcagt tccagcctga gggtctcccg gaggaaccgg gtcagctcgg
       61 ccttgatctg ctcggcttcg gccttcggcc cggtgaatcc caggaggtgg tcgtcggcgt
      121 acctcaggta tcgcagccgc cggtatccgg ggtccatcgg gtctacggag gggagcgtgc
      181 gcatcgcgcg gagcaggtcc cgggctgctg cccggtcccc gtgccgccgc gctttctctc
      241 gccggtgccg tatcctcatg tattcgggat ttcgtttccg gctggctccc cgcgtgtatc
      301 gcgggatcag ttccctctcg acgaactcgt cgagcttgtt caggtagatg ttggatagga
      361 cgggtgaggc cacaccgcct tgcggaactc cgctgagcgt gtcgtggtat tcccagtcct
      421 ccaggtaccc ggctttgagc atgtgacgga tcagccggag aaaccgctga tcgtggattt
      481 tctccgccag gatcccggcc attacctcat ggtccaaaga tccgaagcag tcggagatgt
      541 caccctcgat gaaccacgtg gtccctttcc agaagtcgcg gatttcccgc aatgcggtgt
      601 ggcatccgcg gcctttgcgg aacccgtggg agtggtctga gaactgcggc tcatagtatg
      661 cctccaggag gaggcggacc acttcgccga cgagtttatc ggaccacgac ggaaggccga
      721 ggggacggag cttcccgttc tttttcggga tgtagatgcg gcgggccggg gagaaccggt
      781 accgctcgta ccgcatcagc tcgatgatct ggccgatcgt gccctcggac atgccgtcgg
      841 cggttccctc gctggcaccc ggcgtcatcg ccccctggtt ggagtagatg ttgccgtacg
      901 ccagccagta cagtttcttg ttaaacatct gccggtacag ctgcgtgagc ggcaggccct
      961 tcctgccacg ctcgcggaga acgctcagta ccactgcggc gtcttgcatt tcgcatgcct
     1021 cctggcctga atcattcatc gcctgtgccc ttcgccctgt ggaccggctt tcccggtcgc
     1081 cagattggcc ggccgttacc ccggcgacta ctacgggcac tccgtcgccc taggactcgc
     1141 gtcccttagg cgatcccacg ttcacaactg ccatacgtga tagcgcgact taggcgtccc
     1201 gtccgtctcc tttaatgccc ggacagggca tcgctcctgc gccccggagg attaccgcaa
     1261 ggatctgcgc accccgcggc aggggccggt accggtttca tgcgtctttc cggcaggctc
     1321 agattctcgc cttctggaga ctaggcttca ggcaatccgg ctttcaccat atcgcgcgga
     1381 tctcccggca cgccgccccg tacgcatcgg cag
//
LOCUS       DASRPQ010000624         2026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2591996, whole genome shotgun sequence.
ACCESSION   DASRPQ010000624 DASRPQ010000000
VERSION     DASRPQ010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2026
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2591996"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..200)
                     /locus_tag="VFD73_07315"
     CDS             complement(<1..200)
                     /locus_tag="VFD73_07315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73827.1"
                     /translation="MDLVAVAAAVFVLDHVAGCGQVGDDTLRSVMSRLAAMSRSRPRV
                     AGDAQQHPGVAGQEAPSRHPENL"
     gene            265..1463
                     /locus_tag="VFD73_07320"
     CDS             join(265..523,523..1463)
                     /locus_tag="VFD73_07320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611990.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZI73828.1"
                     /translation="MPGKPKHYTPEFKEQAVKKVVDSSPPRTIAEVARELDINDTTLG
                     FWVKAYRKKLSGQPLPADMPDDERVRELERRVRELEMENAFLKKSGSVLREGASVTEK
                     YEFIDAEYAILPAEGDAPAVVQMCEWLGVSKSGFYDWRNRPESETAQRWELLRIKIKA
                     LFEANNAEYGYRRIHAALVRGGESVDDETVRKIMRDLDLHPCQPKPWRHSLTEQDGQA
                     GPIPDLVNRDFTADKPGQKMVGDITYIDTWEGWVYLAAVIDCATRKIAGWAMDDNYKT
                     PLISRAIEMAARNLDLPEGAIFHSDRGSNYTSAEFAKTLKKLGIKQSVGRTGICYDNA
                     LSESVNGTLKNELVYRTAYKTRKAAMDDIARWIELRYNRTRLHSTLGYRTPQEVLDEY
                     LNGQEAA"
     gene            1578..1988
                     /locus_tag="VFD73_07325"
     CDS             1578..1988
                     /locus_tag="VFD73_07325"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HZI73829.1"
                     /translation="MFRVDAGSGVPIYRQLVQQVRRDVMLGRLQPGDQLPSVKEVVDS
                     LSVNPNTVVKAFGELEHQGLVVRRQGVGTFVAAAPPVTSLPVAPKLLGSLARWVDRAR
                     QDGLSSEQIRMLLEVAIDEPAVSPGERRAAGGAG"
BASE COUNT          411 a          588 c          694 g          333 t
ORIGIN      
        1 aggttctccg ggtgacgaga tggagcttcc tgaccagcca cgcccgggtg ctgctgtgcg
       61 tcgcccgcga cccgcgggcg gctgcgcgac atcgcagcca gcctggacat caccgagcgc
      121 agcgtatcgt caccgacctg accgcagccg gctacgtgat caagaacaaa gacggccgcc
      181 gcaaccgcta ccaggtccat ggggtgcccc agattttccg gacaggggat ccaataggat
      241 tctcgccgga aaggacggga tcaagtgccg gggaaaccga agcattacac tccggagttc
      301 aaggagcagg ccgtcaagaa agtggtcgac tcctcgccac cgcggacgat cgccgaggtg
      361 gcgcgggaac tcgatatcaa cgataccacg ctcgggttct gggttaaggc ataccggaag
      421 aaactctcgg ggcagcctct gccggccgat atgccagacg atgagcgggt ccgggagctg
      481 gagcgccgcg tccgcgagct ggagatggag aatgcgttcc tgaaaaaagc ggcagcgtac
      541 ttcgcgaggg agcatcggtg accgagaaat acgagttcat cgacgctgag tacgccatct
      601 tgcccgccga gggcgacgct cccgctgtcg tgcagatgtg cgaatggctg ggagtgtcaa
      661 aatccgggtt ctacgactgg aggaaccggc cggaaagcga gaccgcgcaa cgctgggagc
      721 tgctgagaat caagataaaa gcattgttcg aggcgaataa cgccgagtac gggtaccggc
      781 ggatccacgc ggccctggtc cgcggcggcg agtccgtcga tgacgagacc gtgcggaaga
      841 tcatgcgtga cctggacctg catccctgcc agccgaagcc ctggcgccat tcgctgactg
      901 agcaggacgg gcaggccggc cccatcccgg acctggtgaa ccgtgacttc acggcggata
      961 agcccggcca gaaaatggtc ggagatatca catatatcga tacgtgggaa ggttgggtgt
     1021 acctcgcggc cgtcatcgat tgcgcgacac ggaagatcgc cgggtgggcg atggacgata
     1081 attacaagac cccgctgatt tcccgggcga tcgagatggc tgcccggaac ctggacttgc
     1141 ccgagggggc catattccac tccgaccgcg gcagcaatta tacctcagcg gagttcgcta
     1201 agacgctgaa gaagctcggg atcaagcagt ccgtcggccg aacagggata tgctacgata
     1261 acgccctgtc ggaatcggta aacgggacgc tgaagaacga gctcgtctac cggaccgcct
     1321 ataagacccg caaggccgcc atggatgata ttgcgcggtg gatcgaactc cgctacaata
     1381 ggacgcgtct ccactccacg ctcgggtacc ggacgccgca agaagtcttg gacgagtacc
     1441 tgaacggaca ggaagccgcg tgaattaacc gcaatttccc tgtccggaaa acgcggggca
     1501 gctcagatct cgcttatgtt gcgcaagcac tgtcactcta ctagtctagt agtagagcga
     1561 tagccttgga ggcgggcatg tttcgtgttg atgccgggtc cggtgtgccg atctaccggc
     1621 agctggtcca gcaggtgcgc cgggatgtca tgctgggccg gctgcagccc ggtgaccagc
     1681 tgcccagcgt gaaagaggtt gtcgactcgc tgtcggtcaa tccgaacacg gtggtgaagg
     1741 cgttcggcga gctggagcat caggggctgg tggtacgccg gcagggcgta gggacgttcg
     1801 tggcggcggc gccgccggtg acgtcgctgc cggtggcgcc gaaactgctg ggctcgctgg
     1861 cccgctgggt ggaccgggcg aggcaggacg ggctgtcttc ggagcagatc cggatgctcc
     1921 tggaggttgc catcgatgag ccggcggtca gcccgggtga gcgccgcgcg gccggcggtg
     1981 cgggatgagc gcggctctgc ggtgcgcagg cctcgggcac cgctac
//
LOCUS       DASRPQ010000625         2189 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2266459, whole genome shotgun sequence.
ACCESSION   DASRPQ010000625 DASRPQ010000000
VERSION     DASRPQ010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2189
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2266459"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..555
                     /locus_tag="VFD73_07330"
     CDS             <1..555
                     /locus_tag="VFD73_07330"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HZI73830.1"
                     /translation="APGSLERAPQTYVTLTRITNPAERGRFQRVVAERFPNVSILDIS
                     LLQEALERLVNRVTLALRFMALFSIAVGILVMTGALAATRLQRLREAALLRTLGASRA
                     QIFGIALAEYVSVGLLAAVTALVLGTLAAWAVARFLFKGGFSLPPGPTTAIAASVVAL
                     TAFVGLLNSRAAVRRTPLEVLREE"
     gene            592..1491
                     /locus_tag="VFD73_07335"
     CDS             592..1491
                     /locus_tag="VFD73_07335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-[acyl-carrier-protein] reductase"
                     /protein_id="HZI73831.1"
                     /translation="MLTIDLTGKRALVAGVSDDGGFGFAIAKALAEAGAKICVGSWPP
                     ALGIFTKLLERGKMDESMRLADGRKLEFERIYPLDAAYDSLADAPADVRDNKRYKELG
                     DFSVQGMTDRIKADFGEGSLNIVVHSLANAPEVKSPLVDTSRQGYLSAISVSAYSNIS
                     LVRHLAPLMAEGGSFLSLTYMAGERVIPGYGGGMSSAKAALEADTRTLAFEAGRRWGV
                     RVNAISAGPWASRAASAIGFIDTMIRYTASNSPLPRPIDASDVGSTAAFLCSPLAQAI
                     TGSVVYVDNGFHAMGMAVVESSG"
     gene            complement(1493..1915)
                     /locus_tag="VFD73_07340"
     CDS             complement(1493..1915)
                     /locus_tag="VFD73_07340"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI73832.1"
                     /translation="MTSSHPGHVLVPVAPLRRLLVVDDESTIRSALRRYLRLRGWEAD
                     EAEDGRVALRKLGHAPPEAYQVVVSDLRMPHCTGVELHDWLAEHRPELFARLIITTGD
                     LASPAWSQFLSRTPRPLIEKPFELAVLTQLIEAVARGR"
BASE COUNT          392 a          682 c          705 g          410 t
ORIGIN      
        1 gccccgggct cgctggagcg cgcacctcag acctacgtga cgctcacccg catcaccaat
       61 cccgccgaac ggggacggtt tcagagggtt gtggcagagc gctttcccaa tgtgtctatt
      121 ctcgatatct cactgcttca ggaagcgctg gagcggctgg tgaaccgggt gacgctcgcg
      181 ctccgtttta tggcgctgtt cagcatcgct gtcggcatat tggtcatgac cggcgcgctt
      241 gccgccactc gtttgcagcg tcttcgggaa gcagcgctgc tccgcaccct gggcgccagt
      301 cgcgcgcaaa tcttcgggat tgcgctggcg gaatacgtct cggtgggact gctcgcggct
      361 gtcaccgccc tggtgctggg aacactcgcc gcgtgggccg ttgcgcgatt cctgttcaag
      421 ggagggtttt cccttccacc tggtccaacc acggcgatcg cagcgagcgt ggttgcgctt
      481 acggctttcg tgggattgct gaacagccga gcggcggtgc ggcggactcc gctcgaggtg
      541 ttgcgggagg aatgagtccg cgtcagactt acccccacag gacattactt catgctcacc
      601 atcgatctta ccggaaagcg ggcactcgtc gcgggagtct cggatgacgg ggggttcggc
      661 tttgccattg ccaaggctct ggccgaagcc ggagccaaga tatgtgtggg aagctggcct
      721 ccggctctgg ggatcttcac caagctgctg gagcggggga agatggacga gtccatgcga
      781 ttggccgatg ggagaaaact cgagttcgag cggatctacc cactcgacgc cgcgtacgat
      841 tcgctggcgg acgccccggc ggatgtccga gacaataagc gctataagga gctgggtgac
      901 ttcagcgtcc aggggatgac cgatcgcatc aaggcggatt tcggcgaagg ctcactgaac
      961 atcgtggttc acagtctggc caatgcgccc gaggtcaagt cacccctggt cgacacctct
     1021 cggcaggggt acctctccgc catcagcgtg agtgcctaca gcaacatctc tttggtgcgc
     1081 cacctggcac ccttgatggc ggagggcgga tccttcctct cactcaccta catggcaggc
     1141 gagcgggtca taccagggta cggcggcgga atgtcgtcgg ccaaggcagc gctggaggca
     1201 gacacccgaa ccctggcgtt cgaggcggga cgtcgctggg gagttcgggt caacgccatt
     1261 tccgcagggc cgtgggcttc tcgtgctgcc agcgcgattg gattcatcga tacgatgatc
     1321 cgatacacgg ccagcaactc tcccctgccc cgacctatcg atgccagcga cgtcgggtct
     1381 actgctgcct ttctgtgcag cccgctcgct caggccatca ccggcagcgt cgtctacgtg
     1441 gacaacggat tccatgccat ggggatggcg gttgtcgaga gctcgggttg actcagcgcc
     1501 ctcgggccac tgcctcgatc agctgggtca gcacggcgag ctcgaatggc ttttcaatca
     1561 acggtcgagg ggtgcgggag aggaactggc tccaagccgg agaggccagg tcgccggtgg
     1621 tgatgattag ccgggcgaag agctcgggtc ggtgctccgc cagccaatcg tgcagctcga
     1681 cgccggtgca atgcggcatc cgaagatcgg agaccacgac ctgatatgcc tcgggagggg
     1741 catgccccag cttgcggagc gccactcttc catcctcggc ttcatctgcc tcccaaccac
     1801 ggaggcggag ataccgcctc agagcgctgc ggatcgtcga ctcatcgtcg accaccagca
     1861 atcgccgcag cggagcgacg ggcaccagca cgtgccctgg atgggatgaa gtcactcagg
     1921 ccgggaagcc gaggctgatg actggctggg ggagccgagg tgtgaactcg agcttcttcg
     1981 tataatagta ctctgaattc gctcgccgcg tagcactcgg cacaagcatc cccgtccccc
     2041 aaagagagcc atggccgagc tgatttccca accggatggt cccatccacc ggctcaccct
     2101 gaatcgcccc aatcgccgca acgcgctctc gccggctctg gcccggagcc tggctcagga
     2161 aatcgagcag gtcgaggaag ccggacagg
//
LOCUS       DASRPQ010000626         1020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2266904, whole genome shotgun sequence.
ACCESSION   DASRPQ010000626 DASRPQ010000000
VERSION     DASRPQ010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2266904"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(797..982)
                     /locus_tag="VFD73_07345"
     CDS             complement(797..982)
                     /locus_tag="VFD73_07345"
                     /inference="COORDINATES: protein motif:HMM:NF040101.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6429 family protein"
                     /protein_id="HZI73833.1"
                     /translation="MLWLGLHDGRRAWKTFDGDAMNRLHAKGLIHDPVGKAKSVMFTP
                     DGLARSEHLFQELFAKR"
BASE COUNT          220 a          312 c          324 g          164 t
ORIGIN      
        1 aggcccaagt aaaatgtggg tagaggcaag atctggagcg gcaccagggc cgttgaagtc
       61 cggaacggtc aaaaacacaa gagtcagcgc cggaccgcga agcggatcga tccctcgctg
      121 atatcgccgt ccggcacggg gacttcgccg accagtgcag ttcgtattcg ccgggagcca
      181 ggcgcggcgc ggaagcgaac aggacctccg gcgccgagtc gcccaggaga gtcagcctct
      241 ccaccgtccg gtcaccctgc gtgatgaaca agcgggaccc gcggtggtcc accaatccgt
      301 cgaaacgaac gaagtactgt gcattccggc cgtccatctc ggtctgagcg gccgggaagg
      361 actcgatcat atgcatgggc cgagccaaag catgctggag tgacaacaag aggagcgcca
      421 tccccaacgt atatatcgag atgctgcagc agggcctcat ggtcgtgtcc gaaggtcggt
      481 aggaattgct aacggcacgc tctcctgagc atcctcctga gcatcagggt caccggatca
      541 ggcggcgagg tcaagcggct tgtcagcggg atgttgatag cacgtggtat gaccgatgca
      601 gggagcaggc ggtttgaacg acggcaccct caacctgtta agcaagagac gagagctggg
      661 cgagcttgac gacgaggcgg gctgatgcga gctatgcggc cgtcttgatg ccgcagagcc
      721 gcctccccga actcctgcct taggaatgga tggcaatccg ggagcgggcg acagccgcct
      781 gatcacgccg accggatcat cgcttcgcga acagctcctg gaacaggtgc tccgagcgcg
      841 ccaagccatc cggcgtgaac atcacggatt tggccttgcc aaccggatcg tggatcagcc
      901 ccttcgcgtg cagccggttc atcgcgtccc catcgaaagt cttccaggcg cgcctgccgt
      961 cgtgaagtcc cagccacagc agggcctctc aagcgacatg agaaagtcct cccctggcga
//
LOCUS       DASRPQ010000627         3274 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4461540, whole genome shotgun sequence.
ACCESSION   DASRPQ010000627 DASRPQ010000000
VERSION     DASRPQ010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3274
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4461540"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(98..793)
                     /locus_tag="VFD73_07350"
     CDS             complement(98..793)
                     /locus_tag="VFD73_07350"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI73834.1"
                     /translation="MNDLWHGVAEAVHLLLAGDPELYEIIARTLGISLAATGLAMLLG
                     VPLGYALARGRFRGRTMLLSMVNTGMGMPPVVVGLLVWLLLTRSGPFGPLNLIYTKRA
                     MVLAQFIIATPLIVGFAAATIQSLPSGLSDLLHSLGAKRFHRLWIIAGEARLGLLAAI
                     MAGFGAIISEVGASMTVGGNLRGSTRVLTTAIVTETGRGNLPVALALGLLLLALAFSV
                     NLLLTIAQQRQRA"
     gene            complement(765..1658)
                     /locus_tag="VFD73_07355"
     CDS             complement(765..1658)
                     /locus_tag="VFD73_07355"
                     /inference="COORDINATES: protein motif:HMM:NF024257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HZI73835.1"
                     /translation="MKSVNALLRVLMVPVLLGLSSTPVLAQQHGAEIILATTTSTQDT
                     GLLDSLLPMFQRATGIKVKAIAVGTGAALDMARRGDADAVLVHAPEAERAYVESGDLI
                     DGRLIMHNDFLIIGPASDPAHIRNQRDAAAAMKAIAQGGSFVSRGDGSGTEKKELALW
                     KAAGVSPASIPKREETGQGMGATLLVAEARQTYTLTDRGTYLAFKDHLTLVPLVEGDP
                     RLLNIYHAYVVNPGKHPTARRTEATRFVRYLTQPDVQQWIGQFGVAKFGRPLFVPDAG
                     QASVNTSGLEETGERSLAWSR"
     gene            complement(1667..2617)
                     /locus_tag="VFD73_07360"
     CDS             complement(1667..2617)
                     /locus_tag="VFD73_07360"
                     /inference="COORDINATES: protein motif:HMM:NF019042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HZI73836.1"
                     /translation="MPARAGLAFLLLVPAATLAGQTSTAPAPTVKLSGYIQGRETYQD
                     NVGIVGTINRARLAAAGAVLGNVTWKIQGEFRTGNVGTGKASVSLQDAYVRWTHEALG
                     LQIGQFKTPFTREFITSLSEVETADRSTVVDSLAPKRDIGVMGDYALGGRITLSAGIF
                     NGEGQNVTANTDSSALGIARVTFRPHPYLLLGTNAARYFSDSTRYGVDASVESPWMIV
                     RGEYIGQHHDQAITGDDKGWYALAAAPVRPWIQPVLKYEWFNRPRIPLDAQKNRAWTA
                     GVNLFPWGRSTRFTLEYVSRKVGDPGVRKGLGLAQAQVIF"
     gene            complement(2688..3074)
                     /locus_tag="VFD73_07365"
     CDS             complement(2688..3074)
                     /locus_tag="VFD73_07365"
                     /inference="COORDINATES: protein motif:HMM:NF012354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HZI73837.1"
                     /translation="MNPRGKGRLKPQLSELTSRLAPRQKVWLTFQGSFLMGPNYLRFL
                     RAVDETGTIREAGKAVGWSYRTCLNRIRRMEAILGARVLETARGGTSGGGARLSPEAQ
                     RLVAIFDRWQEAVTEYSRRTFQKAAR"
     gene            complement(3089..>3274)
                     /locus_tag="VFD73_07370"
     CDS             complement(3089..>3274)
                     /locus_tag="VFD73_07370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HZI73838.1"
                     /translation="VAYFTAHFPRNFWPIISGGEVPALYCFIYLYLFSTGAGPYSLDA
                     ALRRRRPVAEPRDLHAW"
BASE COUNT          592 a         1017 c         1100 g          565 t
ORIGIN      
        1 agtgcggtcg tggtgccact gggaaagatc agggagggaa tctgcaggac cgcgcgcccg
       61 tttctcttga actccaggtt ggcgagcgac acctccatca ggcacgctgc cgctgctggg
      121 cgatggtgag gaggaggttg acgctgaacg cgagtgccag gagcaggaga ccaagggcca
      181 gggcgaccgg caaattgccc cggccggtct cggtcacgat ggcggtggtc aacacccggg
      241 tgcttcccct gaggtttcca cccactgtca tcgaggcacc cacctccgag atgatggccc
      301 cgaaccccgc catgatcgcg gccagcaggc cgagtcgtgc ttcgcccgcg atgatccaga
      361 gccggtggaa ccgtttggca ccgagggaat ggaggagatc ggacagtccg ctggggaggg
      421 actgaatggt ggccgcggca aagcctacga tcagcggggt ggcgatgatg aactgggcca
      481 acaccatcgc ccgtttggtg tagatcaggt tgagcgggcc gaacggtccg ctccgggtga
      541 gcaacagcca gaccagaaga ccgacaacca ccgggggcat tcccatcccg gtgttcacca
      601 tactcagcag catggtgcgg ccgcgaaatc tcccacgtgc caacgcgtac cccaggggaa
      661 ctccgagcag catggccaat ccagtcgccg ccagggaaat ccccagcgtg cgcgcgatga
      721 tctcatacag ctcgggatca ccagccagca gcaggtgaac tgcctcagcg actccatgcc
      781 agagatcgtt caccggtctc ctccagtccg gacgtgttga ccgaggcttg cccggcgtcg
      841 ggcacgaata acgggcggcc gaacttggcc acgccgaatt gtccgatcca ctgctgcacg
      901 tcgggctggg tcagatagcg aacgaagcgg gttgcttcag tgcggcgcgc cgtggggtgc
      961 ttgcccggat tgaccacgta cgcgtgatag atgttgagca gtcgagggtc accttccacc
     1021 aagggcacga gcgtcagatg gtccttgaat gcgagatagg tgccccggtc ggtaagggtg
     1081 taggtctgcc gagcctcggc cacgaggagc gtggcgccca ttccctgacc ggtctcttcg
     1141 cgcttgggaa tcgatgccgg cgagacaccc gctgccttcc acaatgccag ctctttcttc
     1201 tcggtgcccg atccgtcacc ccgcgagacg aacgagccgc cctgggcaat ggccttcatg
     1261 gcagcggcag catcgcgctg attccggatg tgggccggat cgctagccgg cccgatgatc
     1321 agaaaatcgt tgtgcatgat caggcggccg tcgatcagat cgccgctttc gacgtaggcc
     1381 cgttcggcct cgggagcgtg gaccagcacc gcgtcggcgt cgccgcggcg agccatgtcg
     1441 agggccgctc cggtcccgac ggcgatcgcc ttgaccttga tgccggtggc ccgctggaac
     1501 atcggcagca acgaatcgag cagtccggtg tcctgcgtgc tggtggtggt cgcgagtatg
     1561 atctcggctc cgtgctgctg ggccaaaacc ggagtggagg agagccccag cagcaccggt
     1621 accatcagaa ccctgagcag ggcattcact gatttcatgg aagacctcag aagatgactt
     1681 gggcctgcgc cagaccaaga cctttgcgca cgcctgggtc gcccaccttg cgggagacgt
     1741 attcgagcgt gaaccgggtc gagcggcccc aggggaacag attgacgcct gcggtccagg
     1801 ctcggttctt ctgcgcatcc agcggaatcc ggggccggtt gaaccattcg tacttgagca
     1861 ccggctggat ccagggtcgg accggcgcag cggcgagcgc gtaccatccc ttgtcatcgc
     1921 cggtaatcgc ctgatcgtgg tgctggccga tgtattcgcc ccgaacgatc atccagggcg
     1981 actccacgct ggcatcgacg ccgtagcggg tgctgtcgga gaaatagcgg gccgcgttgg
     2041 tgcccagcag cagatacgga tgcgggcgga aggttactcg cgcgatcccc aaggcggagg
     2101 aatcggtgtt ggcggtgacg ttctgcccct cgccgttgaa gatgccggcc gagagcgtga
     2161 tccgtccgcc cagtgcatag tcgcccatga cgccgatgtc tcgcttcggg gcgagcgaat
     2221 ccactacggt ggagcgatcg gcggtctcga cctcgctgag tgaggtgatg aactcccgcg
     2281 tgaatggggt cttgaattgc ccgatctgca gccccaacgc ctcgtgagtc cagcgcacgt
     2341 aggcatcctg cagcgagacg ctggccttgc cggtaccgac gttaccggtg cggaactcgc
     2401 cctggatttt ccaggtaacg tttccaagga ccgcgcccgc cgccgcgagc cgagcccggt
     2461 tgatcgtgcc gacgatcccg acgttgtcct gataggtctc gcgcccctgg atgtagccgc
     2521 tgagcttgac ggtgggagcc ggagccgtgg aggtctggcc ggcaagcgtc gccgctggga
     2581 cgagcaggag gaaagcaaga ccggcgcggg caggcatcga ggtcctttgg caagggcaca
     2641 gtcggtcccc aacgtacccc aggcccgagc gttaggcaac gccgtgccta tcgcgccgct
     2701 ttctgaaagg ttcttctgct gtactctgtc accgcctcct gccagcggtc gaagatcgcg
     2761 accagccgct gtgcctccgg actgaggcga gcgccgccac cggaggtccc gccccgagcc
     2821 gtctccaaca cgcgggcccc caggatggct tccattcgcc gaatacggtt gagacaggtg
     2881 cgatagctcc agccgactgc cttccccgcc tcgcggatgg tgccggtctc atcgacggcg
     2941 cggagaaagc ggagatagtt gggtcccatg agaaaggacc cctggaaggt gagccaaacc
     3001 ttttgccggg gcgcgaggcg ggaggtcagc tccgagagtt gaggtttgag ccggcctttt
     3061 cctcttgggt tcatctgtca gctcgatctc accaggcgtg caggtctctg ggctccgcaa
     3121 cgggtctccg ccggcggaga gcggcatcga ggctgtaggg tccggcgccg gtggagaaga
     3181 ggtagaggta gatgaagcag tacagcgccg gcacctcgcc gccactgata atgggccaga
     3241 agttacgggg gaagtgggcg gtgaagtatg ccac
//
LOCUS       DASRPQ010000628         1195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1961315, whole genome shotgun sequence.
ACCESSION   DASRPQ010000628 DASRPQ010000000
VERSION     DASRPQ010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1195
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1961315"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..537)
                     /locus_tag="VFD73_07375"
     CDS             complement(<1..537)
                     /locus_tag="VFD73_07375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73839.1"
                     /translation="MLRGMVRMDLTRRLNANRALSATMSFLALIGWGAFAYAAGTSVR
                     AERQLRDELAQSKAAQDRLMTEQGQHQAAVGHLAQVQTNLASARGELETLAQKREQAV
                     SQVAAARQELVVLTKRRDEKQANASEKGGVRGAKPSSEPAQVAAQGKGQKASETGGAQ
                     AAKPPSKPARLAARTKHDA"
     gene            complement(761..937)
                     /locus_tag="VFD73_07380"
                     /pseudo
     CDS             complement(761..937)
                     /locus_tag="VFD73_07380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611382.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
     gene            complement(942..1058)
                     /locus_tag="VFD73_07385"
                     /pseudo
     CDS             complement(942..1058)
                     /locus_tag="VFD73_07385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611338.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          178 a          370 c          397 g          250 t
ORIGIN      
        1 ggcgtcgtgc ttggtccgag cagccaggcg agccggtttg ctcggcggct tggccgcttg
       61 cgcaccaccc gtttcagatg ctttctggcc tttgccctgg gctgcgacct gcgctggttc
      121 gctggacggc ttggcccctc ggacgcctcc cttttcggac gcgttcgcct gcttctcgtc
      181 acgccgcttc gtgagcacga ccagctcttg ccgagcggca gcgacttgag acaccgcctg
      241 ctcccgcttt tgagccaggg tttcgagttc gcctcgagca gatgccaggt tggtctggac
      301 ctgggcgagg tggccgactg cagcctgatg ttggccctgc tcagtcataa gccgatcctg
      361 ggcagccttt gattgagcga gctcgtcacg gagttgccgc tcggccctca ccgatgtgcc
      421 ggccgcgtat gcgaacgccc cccagccgat cagggccagg aagctcatcg tagcgctcag
      481 agcccggttg gcgttcagcc gccgggtgag atccatccga accattccgc gcaacatcgt
      541 gatcccctcc agctttgacg gcccgtgatc ctggtgggga gtgtggtcgc agggtggcta
      601 aggcgagagc ggaacgtggt cggctcggct atggtgaatg agagattgcc aggctgcctt
      661 atgactgcac caggctgtca caacgcggta tacccaagta ttatggctga gttagcgtct
      721 acgggttgat cggcccccat ggggtggtcc ggggtgaatg ttagtgccgg gttggtcttt
      781 gcgctacggg gcttctggcc ggcgaagctg gttgggtgag cgcagccggc caggccgcga
      841 aggcgggcac gaacacctcc ggggccggcg gtcggtagcc cagagacgca tgcgggcgca
      901 cgctgttgta gtgccgtcgc cagctttcga tcacaactga cctcggtgac gccgatcgag
      961 cgcaccgcat cggccacggg ggtgccctgc gcgaccagca catccacctg gcgcagcttg
     1021 gacacgatct cttcgggctt gtgtctcttc ctcgacatgg gatccgtcct tcttcggctc
     1081 tcacgagcca tacctcagag cggaccactt caatggggga ggatcagctt tctgggcatc
     1141 ggtgaaaagg acgtggccgt tcccttccag gcgttggagt gggtgactga gccta
//
LOCUS       DASRPQ010000629         1696 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4461797, whole genome shotgun sequence.
ACCESSION   DASRPQ010000629 DASRPQ010000000
VERSION     DASRPQ010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1696
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4461797"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..685
                     /gene="tmk"
                     /locus_tag="VFD73_07390"
     CDS             <1..685
                     /gene="tmk"
                     /locus_tag="VFD73_07390"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HZI73840.1"
                     /translation="GHGQGSSQQHHHAGMSSRGFFIVLEGPEASGKSTLLQPLAALMR
                     DSKVDPVVVREPGGTRAAEIARQALLDPEHPVGPLAELFLYLAARADLVETVILPALE
                     RGRVVLSDRFALSTEAYQMAGRSLDPMLVRAGNQAATHGLIPDLTIILDLPPELGQAR
                     QIAAGKRQDRLDRESMDFHRRVVDYYLAIRGEKVRHLDARLSPDRLLQAAWAEVRAAA
                     PEMFPVTVG"
     gene            816..>1696
                     /locus_tag="VFD73_07395"
     CDS             816..>1696
                     /locus_tag="VFD73_07395"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HZI73841.1"
                     /translation="MKQRWGVIGLVAVISFLSGGWLLQRGVASDGNVYQQARLFDDVL
                     GHVSTYYVDSIGETDLYQKATRGMLEQLKDPYSVLLTGDDYKALTEQTSGNYAGLGIQ
                     IDVRDGWITVVAPLPETPAERAGIETGDQIIEVDGKSTEGWKNDQAVKALRGEPGSKV
                     AITVRRAGINDPMKYRLTRAQIHMRSVPPGTMFDRGVGYISLNPVSETSAEELRQEIT
                     AMKAKGMKSMIMDLRGNPGGLLDQGVKVADLFLDARQEIVSTRGRARGSTKEFYDEAK
                     QAWPDLPIIVLVNDGTA"
BASE COUNT          321 a          479 c          565 g          331 t
ORIGIN      
        1 agggcatgga caagggagca gccagcagca tcatcacgct gggatgagct ctcgcggttt
       61 cttcatcgtc ctcgaagggc cggaggcctc cggcaaatcc acactgctgc agccactggc
      121 cgcgctgatg cgggactcca aggtcgaccc ggtcgttgtg cgcgagccgg gagggacccg
      181 tgcggcagaa attgcccgcc aggcgctgct cgaccccgag catccggtgg gtcccctcgc
      241 tgaattattc ctgtatctgg cggcaagagc tgatctggtt gagacggtca tcttgccggc
      301 gctggagcgt ggacgggtgg tcctgtctga tcggtttgcg ctctcgactg aagcgtatca
      361 gatggctgga cgtagtctcg acccgatgct ggtgcgggcg gggaatcagg cggccactca
      421 cggactcatc cctgatctca ccatcatcct cgatctgccg cccgagctgg gccaggcgcg
      481 gcagattgcc gccggcaagc gacaggaccg gcttgatcgg gagagcatgg attttcatcg
      541 aagggtggtc gattattacc tagcgattcg gggtgaaaag gtgcgacatt tagatgcgcg
      601 cctttcgccg gaccggctct tgcaggcggc ttgggcggaa gtgcgcgccg ccgctccgga
      661 aatgtttcct gtgacggtcg gctaactctt tactgttctg caatctaccg cctcgctggg
      721 aagatcgatt tttactcagg tctgggcggt gtgaggtcgt tgcctcgagg gttgcggacc
      781 agatgtccag ctattctgcg ggagcggagg cagatatgaa gcagcgttgg ggcgtgattg
      841 ggctggtggc ggtgatctct tttctgagcg gtggctggct gctgcagcgc ggcgttgcca
      901 gcgacggcaa cgtctaccag caggcacgcc tgttcgacga cgttctgggt cacgtcagca
      961 cctactatgt cgactcgatt ggcgaaactg acctgtatca aaaggccacc cgcgggatgc
     1021 tggagcagtt gaaggacccc tactcggtgc tgttgaccgg cgacgactac aaggcattga
     1081 ccgagcagac gtcgggcaat tacgccggtc tggggattca gatcgacgtg cgcgacggct
     1141 ggatcaccgt ggtggcgccg ctacccgaaa ctccggctga gcgggcggga atagagaccg
     1201 gcgaccagat catcgaggtg gatggcaagt cgaccgaggg atggaagaac gaccaggcgg
     1261 tgaaggcgct ccggggagaa cccgggtcca aggtggccat caccgtccgt cgagccggca
     1321 tcaacgaccc gatgaagtac cgccttaccc gcgcccaaat tcatatgcgc tccgttccgc
     1381 cgggcaccat gttcgatcgt ggggtaggct atatctcgct gaatccagtg agcgagacat
     1441 ctgccgagga gctccggcag gagatcacgg cgatgaaggc aaagggcatg aagtccatga
     1501 tcatggacct gcggggtaat cccggcggtc tgctggatca gggtgtgaaa gtcgccgacc
     1561 tcttcctcga tgcccgtcag gaaatcgtgt ccaccagggg ccgggctcgt ggctctacca
     1621 aggaatttta cgacgaggcg aaacaggcct ggcccgatct cccgatcatc gtactggtca
     1681 atgatggaac tgccag
//
LOCUS       DASRPQ010000630         1514 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1640444, whole genome shotgun sequence.
ACCESSION   DASRPQ010000630 DASRPQ010000000
VERSION     DASRPQ010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1640444"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..693
                     /locus_tag="VFD73_07400"
     CDS             <1..693
                     /locus_tag="VFD73_07400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73842.1"
                     /translation="RQADSLAQIQFTACSDSVRTQMIATVAAKPTKKKRKKHPVVTQP
                     SEELIANQIQAACGQGTAMPQPVVAVSTPATMPVDSGKQPKKPEVPAAAVTTPSPAAQ
                     PEPARMQDTTSADSTRKSQEMEMSRETFAYSGAARDPFSSLLNLAKNGPELADLQLVG
                     IYQNLRSPAASVAVFREKNGGKRHKLRAGDQLGRSRLVQIRERDVVFTIEDFGFERQE
                     TLSLRKQEDVTP"
     gene            690..>1514
                     /locus_tag="VFD73_07405"
     CDS             690..>1514
                     /locus_tag="VFD73_07405"
                     /inference="COORDINATES: protein motif:HMM:NF023169.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMIN domain-containing protein"
                     /protein_id="HZI73843.1"
                     /translation="MTRFYRLMVATAAIFGVTSAARADGPASGEVTGVSVQPSPGRAD
                     VIVGVRGAVEVRDFMLQNPNRLVLDIVGAKLKGNSSTVYDGVKRGGVLNLRYSQFAPN
                     VVRVVMDLERAMDYHVERVTDAVRVSFGTDQSFVAWSSSDRQPASEPEAKVAPRREPE
                     VQLPASRLIRANAGEEPRITVVWDRASIADVVAGFAAFSGRTIILGKDIKGEVTAEIR
                     NQPWPQAFQAILTAQGLSAQEMAGGIIRVDNPSALASLDSLEPLETSVVRVNYAKAK"
BASE COUNT          290 a          492 c          490 g          242 t
ORIGIN      
        1 cggcaggccg actcactggc tcagatccag tttaccgcct gctccgattc ggtgcggaca
       61 cagatgattg cgacggtggc cgccaagccg accaagaaga agagaaagaa gcacccggtc
      121 gtcacccagc catcagaaga gctgattgcg aatcagatcc aggcggcctg cggccagggc
      181 acggccatgc cacagccggt tgtggccgtc agcactcccg caacgatgcc ggtagacagc
      241 gggaagcagc cgaaaaagcc ggaagttccg gcagctgccg tgaccacacc gtcgcccgcg
      301 gcgcagcctg aacctgctcg gatgcaggat actacgtccg ccgactcgac tcggaaatca
      361 caagagatgg agatgtcccg agaaaccttc gcctattccg gcgctgctcg ggatccgttc
      421 agctcactcc tgaacctggc caagaatgga ccggagctcg ccgacctgca gctggtgggc
      481 atctatcaga acctgcgctc gccagccgcc agtgtggcgg tgttccggga aaagaacgga
      541 ggcaagcggc ataagctccg tgccggtgac cagctcggcc gttcgcggct cgtccagatc
      601 cgtgaacggg acgtggtatt cacgatcgag gacttcggct tcgaacggca agaaaccctc
      661 tctctccgga agcaggagga cgtaacccca tgacccgatt ctatcgcctg atggtcgcca
      721 ccgccgcgat cttcggagtg acctccgcgg cgcgcgcgga tggccccgcg agcggagagg
      781 tcacgggcgt cagcgttcag ccctctcccg gacgcgccga cgtcattgtc ggcgtccgcg
      841 gagcggtcga agtccgcgac ttcatgttgc agaaccccaa ccggctggtg ctcgacatcg
      901 tcggcgccaa gctcaagggc aactcgtcca ccgtttacga cggggtgaag cggggcggtg
      961 tgctcaacct ccgctactcc cagtttgcac cgaatgtcgt ccgggtcgtc atggacctcg
     1021 agcgggccat ggactatcac gtggagcggg tgaccgatgc cgtccgggtc tccttcggca
     1081 ccgatcaatc gttcgttgcg tggtcgtcca gcgaccggca gccggcaagc gagccggagg
     1141 ccaaggtcgc gccacggcgt gagccagagg tgcagctgcc ggccagccgc ctgattcggg
     1201 ccaacgcagg cgaggagccg cggatcacgg tggtttggga ccgcgccagc attgccgacg
     1261 tcgttgccgg cttcgctgcc ttcagcggac ggacgatcat tctcggcaag gacatcaagg
     1321 gcgaggtgac ggcggaaatc cggaaccagc cctggcctca ggcgttccag gcaattctga
     1381 ccgcccaggg actctcggcg caggagatgg ccggtggcat catccgggtc gacaatccgt
     1441 cggcgctggc ctcgctcgat tcactggagc cgctggagac cagcgtcgtc cgggtgaact
     1501 atgccaaggc caag
//
LOCUS       DASRPQ010000631         2806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_702105, whole genome shotgun sequence.
ACCESSION   DASRPQ010000631 DASRPQ010000000
VERSION     DASRPQ010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2806
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_702105"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..1895)
                     /locus_tag="VFD73_07410"
     CDS             complement(78..1895)
                     /locus_tag="VFD73_07410"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZI73844.1"
                     /translation="MQEAAVVLSVLRERGRKGLPLTQLYRQMFNRDLYLLAYGNIYSD
                     QGAMTPGASEETADGMSEDKIDQITELMRHERYRFTPARRIYIPKKNGKLRPLGLPSW
                     SDKLVGEVVRLLLEAYYEPQFPDQSHGFRKGRGCHTALREIREVRKGATWFIEGDISD
                     CFGSLDHEVMAAILAEKIHDQRFPRLIRHMLKAGYLEDWEYHDTLSGCPQGGVVSPVL
                     SNIYLNKLDEFVERELIPRYTRGASRKRNPEYMRIRHRREKARRLGDLAAARDLLHRM
                     RTLPSVDPMDPGYRRLRYSRYADDHILGFTGPKAEAEQIKADLTRFLRETLRLELNQD
                     KTLISHARTQPARFLGYHIIVQHCDTKITRGRRLVNGRIALRVPPDVIKAKTAPYRRR
                     GKPWHRSRLQNLDDYDIIRIYGAEYRGIVNYYLLAQDVWRPGTLCWHAQTSMLKTLAA
                     KHKSSVAKMAARYKAKAITGHGPRTCFEARLKRKGKKDLVARFGGIPLKQDRRAVIND
                     PAPALTGYPRKELIHRLRKRRCELCEHGSTVAVHQVAALSQLGRPGPGQPAWAALMAR
                     MRRKTLIVCAPCHDHIHANEVPRDFRTVHPIGWTSGKVK"
BASE COUNT          417 a          910 c          890 g          589 t
ORIGIN      
        1 gggcgcgacg tctcgatcac catcttcacg gcttcctctt tgaattcagg agagaagctc
       61 ttcttcgctc gaggcaatta cttcaccttt ccagacgtcc atcctattgg atggactgtc
      121 cggaagtctc ggggcacctc attcgcgtgg atgtggtcat ggcatggcgc gcagacgata
      181 agggtcttgc gccgcattct tgccatgagg gcggcccacg cgggctggcc cggcccgggc
      241 ctgccgagct ggctgagcgc ggcgacctgg tggacggcca ccgtgctacc gtgctcgcac
      301 aattcgcacc gccgcttgcg gagccggtgg atcagttcct tgcgggggta gccggtcagg
      361 gccggggcgg ggtcattgat gaccgcgcgc ctgtcttgct tgagggggat cccgccgaac
      421 cgtgctacca ggtccttctt gccttttcgc ttcagcctgg cctcgaagca ggtcctgggg
      481 ccgtggccgg tgatagcttt cgccttgtag cgggcggcca tcttggccac ggaggacttg
      541 tgcttggcgg ccagggtctt cagcatcgat gtctgggcgt gccagcacag cgtgccgggc
      601 cgccagacgt cctgggcgag caggtagtag ttcacgatgc cccggtattc ggctccgtag
      661 atccggatga tgtcgtagtc gtccaggttc tgcagccggg accggtgcca gggtttgccc
      721 cggcgccggt agggggcggt cttggccttg atcacgtccg gcggcacgcg cagcgcgatc
      781 ctcccgttga ccagtcggcg gccgcgggtg atcttggtgt cgcagtgctg gacgatgatg
      841 tggtagccga ggaaccgcgc cggctgggtg cgggcgtggc tgatcagggt cttgtcctgg
      901 ttcagttcca gcctgagggt ctcccggagg aaccgggtca ggtcggcctt gatctgctcg
      961 gcttcggcct tcggcccggt gaatcccagg atgtggtcgt cggcgtacct tgagtagcgc
     1021 agccggcggt atccggggtc catcgggtcc acggagggga gcgtgcgcat ccggtggagc
     1081 aggtcccggg ctgctgccag gtccccgagc cgccgcgctt tctctcgccg gtgccgtatc
     1141 ctcatatatt cgggatttcg tttccggctg gctccccgcg tgtatcgcgg gatcagttcc
     1201 ctctcgacga actcgtcgag cttattcagg tagatgttac tgaggacggg cgatactacg
     1261 ccgccttgcg gacagccgct gagcgtgtcg tggtattccc agtcctccag gtacccggct
     1321 ttgagcatgt gacggatcag ccggggaaac cgctgatcgt ggattttctc cgccaggatc
     1381 gcggccatta cctcatggtc cagcgatccg aagcagtcgg agatatcacc ctcgataaac
     1441 cacgtggccc ctttccggac ttcgcggatt tcccgcagcg cggtgtggca tccgcggcct
     1501 ttccggaacc cgtgggactg gtccgggaac tgcggctcgt aatacgcctc caagagcagg
     1561 cgcactacct cgccgactag tttatcggac cacgacggca gtcccagggg acggagcttc
     1621 ccgttctttt tcgggatata aatgcggcgg gccggagtga accggtaccg ctcgtgccgc
     1681 atcagctcgg tgatctggtc gatcttgtcc tcggacatgc cgtcggcggt ttcctcgctg
     1741 gcgcccggcg tcatcgcccc ctggtcggag tagatgttgc cgtatgccag caagtacagg
     1801 tccctgttga acatctgccg gtacagctgc gtgagcggca ggcccttcct gccgcgctcg
     1861 cggagaacgc tcagtaccac tgcggcttcc tgcatttcgc atgcctcctg gcctggtgct
     1921 attcatcgcc tgtgcccctt cgccctgtgg accgtcatta gcggtctcca gattggccgg
     1981 acgtcacccc ggcgactact acgggcactc cgtcgccata ggactcgcgt ccctcaggcg
     2041 atcccacgtt cacgactgct atacgtatcg agcgcgactt aggcggcccg tccgtctcct
     2101 ttaatgtcct gacagggcat cgctcctgcg tcccggaggg ttaccacaga tatctgcgca
     2161 ctctgcggca gggaccggta ccggtctcag gcgtctttcc ggcaggctcg gattcttgcc
     2221 ttctggagac taggcttcag gcaatgcggc tttcgccata tcgcgcggat ctcccggcac
     2281 accgccccgt acgcctgggc acggctaccg gtttcctggc atgctattgt ccccggtcac
     2341 ctttcggatc aagggtcagc catcagatcc aaggacacct cctccagtcc aagcccgctg
     2401 cgcgggctat atagcagtgc gcctcgtggc gcacgcagat cagccaattc tggcttagcc
     2461 aagcatgcga gattagccgc acgcggtcat acgcatacgg ttccggaggc cgtcgtgtcg
     2521 tcccacgtca gcgacactat cctggcgcgg ctcgggtcat ctgaccgagc ttgccagcgc
     2581 ctcgccgctc ccattgcgct cccggattcg gacaccgccc cgggctcgcc gcggagtcag
     2641 gattacggag actgtccgct accagaatcg gcgccatcgt catgactgcc gggacccgga
     2701 ccggtccggt cggttgccgc gttcgcgcag ggcctgtccg cgaagggaat gccggctggc
     2761 aaccggccaa taccctgatc acatggccac aatcaagacc acgccg
//
LOCUS       DASRPQ010000632         2026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1640683, whole genome shotgun sequence.
ACCESSION   DASRPQ010000632 DASRPQ010000000
VERSION     DASRPQ010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2026
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1640683"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..357)
                     /locus_tag="VFD73_07415"
     CDS             complement(<1..357)
                     /locus_tag="VFD73_07415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HZI73845.1"
                     /translation="MHPSRDHHLPPDPNAYRLAPHPKGRIIIIAPTRAACETIELALG
                     LHLDTLLEREHGAELRSWAGEGLGFGIVAGTGTGKTLGIRPIAESILREPLYPGVVNR
                     EREATPETPNWNVVIVT"
     gene            complement(493..>2026)
                     /locus_tag="VFD73_07420"
     CDS             complement(493..>2026)
                     /locus_tag="VFD73_07420"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HZI73846.1"
                     /translation="LSDPNGITNIFRVALATGQVSQVTNLFTGVSGITETSPAFSVAQ
                     RTGRLMYSVFRANGYDLYAIDAPQATSVTQTVAYRAYGTTTPTAAALPPIDRSDATLA
                     PLLHDPVRGLPADTNFAVVPYKAGLSLTYVGQPSLAVGASQFGTYLGGGASLYFSDLL
                     GNHNLVTGLNVQGSLKDVNALVAYQDLTHRLNWGFAAEQVPYLTGGFVEGTATINGEP
                     ALVDQEVLQRQTNRDFYGLVSYPFSRVQRVEFQAGYSNISFDNELRTQAFSLVSGDQL
                     VDDKQNLPAGSALNLGVATAAWVYDNSLGGATGPILGQRFRLEVSPTVGSLSFVGGLL
                     DYRRYFMPARPFTLATRVLHYGRYGSGGEDQRLQPLFLGYPGLVRGYSYGSFDASECH
                     PTASDPNGCPVFDQLLGSRMVVASAELRFPFFGALGIGSGYYGAFPIDFAIFGDGGLA
                     WDTQNQPSILGSGTRDPVFSAGAGFRINLLGFAVAEIDLVHPFDRPDKNWVWQFELQP
                     GF"
BASE COUNT          392 a          614 c          665 g          355 t
ORIGIN      
        1 cgtgacgatc accacattcc agttgggcgt ttccggagtg gcctcgcgct ctcgattcac
       61 gaccccggga tacagcggct cacgcagaat cgactcggca attggacgga tgcccagcgt
      121 ctttcccgtg ccggtgccgg caacgatgcc gaagccaaga ccctcgccgg cccagcttcg
      181 cagctcggcc ccgtgctcgc gctccagcag cgtgtccagg tgcagcccca gggcgagctc
      241 gatcgtctca caggcagccc tggtgggagc aataatgatg atgcgcccct tgggatgggg
      301 agcgagtcgg taagcgttgg gatctggggg gagatggtgg tcgcgggacg ggtgcatctc
      361 taaaggaagg cggtaaggcg gtagcgtggt agggcggtag gagctagggt cgaagctgga
      421 agtgcagatg caggatctct agtctcggcc cgccgccctt gtaccgccct accgacttac
      481 cgtcgtacgc ccctaaaacc ctggctgcag ctcgaactgc cacacccagt tcttgtccgg
      541 ccgatcaaac gggtgcacca gatcgatctc ggcgactgcg aacccgagaa ggttgatgcg
      601 gaagccggca cccgcgctga agaccgggtc cctggtgcca gacccgagaa tggagggctg
      661 gttctgcgtg tcccaggcga gtccgccatc cccgaaaatc gcgaagtcta tgggaaacgc
      721 gccgtaatac cccgagccga tccccagtgc tccgaagaat gggaagcgca gctctgcact
      781 ggccaccacc atacgactgc ccagcagctg gtcgaagacc gggcacccgt tcggatcact
      841 ggccgtgggg tggcactcgg aagcgtcgaa cgacccgtag ctgtaacctc ggaccaggcc
      901 cggatagccc aggaagagcg gctgaagtcg ctggtcctcg cctccgctac cgtaacggcc
      961 gtagtgcaac actcgagtgg ccaaggtgaa ggggcgagcc ggcatgaagt accggcgata
     1021 gtcgagcagt cctcccacga acgacaacga tcctaccgtg ggagagacct ccagccgaaa
     1081 gcgttggccc aggatggggc cggtggcgcc gcccagggag ttgtcgtaga cccaggcggc
     1141 cgtggccaca ccgaggttca gtgcgctgcc tgcgggtagg ttttgcttgt cgtcgacaag
     1201 ctgatcgccg ctcaccaacg aaaatgcctg ggtgcgaagc tcgttatcga agctgatgtt
     1261 gctgtaccct gcctgaaatt ccacccgctg cacccggctg aaggggtacg acaccaaccc
     1321 gtagaagtca cggttggttt ggcgctgcag cacctcctga tcgaccaggg ctggctcacc
     1381 attgatggtg gcggttcctt cgacgaaccc gccggtgagg taagggacct gttccgcagc
     1441 aaagccccag ttgagccggt gggtgagatc ctgatacgcg accagcgcat tcacatcttt
     1501 caggctgccc tgaacattga gtccggttac caggttgtga ttgccgagca ggtcgctgaa
     1561 gtagagcgac gccccacccc ccagataggt gccgaactga ctggcgccga ctgcgagtga
     1621 gggctgaccg acatacgtca gggacagccc agccttatag ggcactacgg caaagttggt
     1681 atccgcaggt aggcctcgca ccgggtcgtg cagcagtggc gccagtgtgg catcgctgcg
     1741 gtcgattgga ggcagggccg cggccgtcgg cgtggttgtt ccatatgctc ggtatgccac
     1801 cgtctgggtg accgacgtcg cctgcggagc atcgatggca tagaggtcgt atccgtttgc
     1861 ccggaagacg ctgtacatca agcgcccggt acgctgggcc acgctaaatg cgggactcgt
     1921 ctcagtgatc ccgctgacgc cggtgaacag gttggtgacc tgggagacct ggccggtggc
     1981 cagagcgacc cggaaaatgt tggtgatgcc attcgggtcc gaaagg
//
LOCUS       DASRPQ010000633         3156 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4462086, whole genome shotgun sequence.
ACCESSION   DASRPQ010000633 DASRPQ010000000
VERSION     DASRPQ010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3156
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4462086"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            211..2715
                     /locus_tag="VFD73_07425"
     CDS             211..2715
                     /locus_tag="VFD73_07425"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF001950.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="HZI73847.1"
                     /translation="MLVPRTVSRYATRLLFLLLAGVMLLPVALPGLLAQEVQGTAEHR
                     PGGEVNLHLPDLHQGDFLGFTGHQILLTGLVVCVLGLLFGLMSYSHVKNLPVHRSMAD
                     ISELIYETCKAYMVQQGKLLLVLFGFIGTVILIYFLLTGLELPKILLILLFSIIGMAG
                     SYGVAWFGIRINTLANSRTAFAALRGHAWPVSEIPLRSGMSVGMMLISVELLLMLGIL
                     LFIPSEVAGACFLGFAIGESLGAAALRIAGGIFTKIADIGSDLMKVVFKIKEDDARNP
                     GVIADCTGDNAGDSVGPTADGFETYGVTGVALIAFIVLAVSDTSLQAQLLVWIFLMRI
                     MMIIASGLSYLVSNSISRARYGGGTRFNFEAPLTQLVWLTSLVSVALTYLVSYVFVPN
                     LGGNSDLWWQLSTVITCGTLAGAIIPELVKVFTSTESRHVREVVTSSREGGASLNILS
                     GFVAGNFSAYWLGITIMGLMAVAYGVSTLGLGELMKAPAIFAFGLVAFGFLGMGPVTI
                     AVDSYGPVTDNAQSIYELSLIEQIPNVKQEIKREHGFDLNFETAKELLEENDGAGNTF
                     KATAKPVLIGTAVVGATTMIFSIIMALTHGLTNGMQNLSILHPPFLLGLITGGAVIYW
                     FTGASTQAVTTGAYRAVEFIKANIRLEGVTKASVEDSRRVVEICTQYAQRGMFNIFLG
                     VFFSTLAFAFIEPFFFIGYLISIAMFGLFQAIFMANAGGAWDNAKKIVETELKMKGTE
                     LHAASVVGDTVGDPFKDTSSVAMNPVIKFTTLFGLLAVELGVYLSAGGSSTLSRVLAV
                     VFFIGALLFVYRSFYGMRIEVEPQTAGTRRPVAVKA"
     gene            2729..>3156
                     /locus_tag="VFD73_07430"
     CDS             2729..>3156
                     /locus_tag="VFD73_07430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HZI73848.1"
                     /translation="MGAGEARLGRRDFLGQAAILGAAAVTHAGLGSHTRWLRTLATVR
                     GAEPFQFDETSVAALQAEMQAGRLTSRAITEHYLQRIAELDRKGPTLRSIIESNPEAL
                     SAADELDRERRQKGPRGPLHGIPVILKDNIDTADRMTTTAG"
BASE COUNT          544 a          965 c          981 g          666 t
ORIGIN      
        1 ggatcaaggt ctcagtccag gccgaaggcg gccattacac tctggtgacg gtggacacca
       61 atcaggtcgg cgagagtgag gccgacaagc tggccaaacg cttcctgacc ttggtgcata
      121 cccgggcgga gccgggccat cgtcccatcg gtgcctactg atcattccat ttgctcaatc
      181 atgccagtga tgcttaggag aatttcgacg atgctcgttc cccgcacggt ctcgcgctac
      241 gctacccggc tgctttttct gctgttggct ggggtgatgc tgctcccggt ggcccttcct
      301 ggtttgctgg cccaggaggt ccagggcacc gccgagcacc ggcccggagg cgaggtgaat
      361 cttcacttgc ccgacctcca ccagggcgac ttcctgggct tcaccggcca tcagattctg
      421 ctcaccggac tggtggtgtg cgtgctggga ctgctcttcg ggttgatgag ctactcccat
      481 gtgaaaaacc ttccggtgca ccgctcgatg gcggacatct ccgagctgat ctatgagacc
      541 tgtaaggcgt acatggtgca gcagggcaag cttctgctgg tcctctttgg tttcatcgga
      601 acggtcatcc tgatctactt cctgctcacc ggcctcgagc tccccaagat cctcctcatt
      661 cttcttttca gcatcatcgg catggccggt agttacgggg tggcctggtt cgggatccga
      721 atcaacacgt tggccaactc tcggacggcg ttcgccgccc tccgcggcca cgcctggccg
      781 gtcagcgaaa ttccgctccg gtcgggcatg agcgtgggaa tgatgctgat ctcggtggag
      841 ctgctcctca tgctgggcat tttgcttttt atcccgagcg aggtggccgg tgcctgcttc
      901 ctggggtttg cgatcggcga gtcgctcggt gctgccgcgc tccgaatcgc cggcggcatc
      961 ttcaccaaga tcgccgacat cggctccgat ctgatgaagg tggtgttcaa gatcaaggag
     1021 gacgatgcgc gcaacccggg agtgattgcg gactgcaccg gagataatgc cggtgattcc
     1081 gtgggaccga cggcggatgg cttcgagacc tatggcgtga ccggcgtcgc gctcatcgcc
     1141 tttatcgtcc ttgcggtgtc ggatacgtcg cttcaggcgc aactgctggt ctggatcttc
     1201 ctgatgcgaa tcatgatgat cattgcatca gggctctcct acctggtgag caacagcatc
     1261 tcccgcgccc gctacggagg gggcacccgg ttcaacttcg aggcgccgct gacccaactg
     1321 gtatggctga cctcactggt atcggtggcc ctgacgtatc tcgtgtcgta tgtcttcgtc
     1381 ccaaacctcg gcggaaattc tgacctctgg tggcaactgt cgacggtgat cacctgcggc
     1441 acgctggccg gcgccatcat tccggagctg gtcaaggtgt tcacctcgac cgagtcccgg
     1501 cacgtccgtg aagtagtgac ctcgtcccgc gagggcggcg cgtcgctcaa catcctgtcc
     1561 gggtttgtgg cgggcaactt ctccgcctat tggctgggca tcaccatcat gggcctgatg
     1621 gctgtcgcat acggggtcag cacgctcgga ctgggcgagc tgatgaaagc gcctgcgatc
     1681 ttcgcctttg gactagtggc ctttgggttc ttgggaatgg gcccggtcac gattgcggta
     1741 gacagttacg gcccggtcac cgacaacgcg cagtcgatct acgagctgtc gctgatcgag
     1801 caaattccca acgtcaagca ggagatcaaa cgcgagcacg ggttcgatct gaacttcgag
     1861 accgccaagg agctgctgga ggagaacgac ggggcaggga acaccttcaa ggccacggca
     1921 aaaccggtgc tgatcgggac ggcggtcgtt ggtgcgacca ccatgatctt ctcgatcatc
     1981 atggcgttaa cccacggcct gaccaacggg atgcagaatc tctcgatcct gcacccgccg
     2041 ttcttgttgg gcctgataac cggcggtgcg gtgatctact ggtttaccgg ggcatcgacc
     2101 caagcagtga ctaccggcgc ctaccgggcc gtggagttca tcaaggcaaa tatccggctg
     2161 gaaggggtga ccaaggcctc ggtcgaggac agccggcgag tggtcgagat ctgcactcag
     2221 tacgcccagc gcggcatgtt caacatcttt ctcggggtgt tcttctccac gctggccttc
     2281 gcctttatcg agccgttctt cttcatcggc tatctcatct ctatcgcgat gttcggcctg
     2341 tttcaggcga tcttcatggc caacgccggc ggtgcttggg acaatgccaa gaaaatcgtg
     2401 gagaccgagc tgaagatgaa aggcaccgag ttgcacgccg cctcggtggt gggcgacacg
     2461 gtaggcgatc cgttcaagga cacctcgtcg gtggcgatga atccggtgat caagttcacc
     2521 acgctattcg gccttcttgc ggtggagctc ggtgtctatc tcagcgccgg cgggtccagt
     2581 acgctgagtc gggtgctcgc cgttgtcttc ttcatcggcg cgctgctgtt cgtctaccgc
     2641 tcgttctacg gcatgcggat cgaagtggaa ccgcagacgg ccggcactcg ccggccggta
     2701 gccgtcaagg cgtaacccgg gtccacccat gggagctggc gaagcccggt tgggccggcg
     2761 cgacttcctg ggacaggcag cgatcctggg cgccgccgcc gtaacccacg ctgggctggg
     2821 atcccatact cgatggctcc gcactctggc cactgtccgg ggtgcggagc catttcagtt
     2881 cgacgagacc agtgtcgccg cgctgcaggc agagatgcag gcggggcgtc ttacctcgcg
     2941 cgccattacc gagcactatc tccagcgcat cgcggagctc gaccggaagg gtccgaccct
     3001 gcggagcatc atcgagagca atcccgaggc gttgagcgcc gccgacgagc tcgatcggga
     3061 gcgccggcaa aagggccccc gcggtccgct ccatggaatt cctgtcattc tcaaggacaa
     3121 tatcgacacc gccgaccgga tgacgacgac ggcggg
//
LOCUS       DASRPQ010000634         1270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1640802, whole genome shotgun sequence.
ACCESSION   DASRPQ010000634 DASRPQ010000000
VERSION     DASRPQ010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1270
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1640802"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1169
                     /locus_tag="VFD73_07435"
     CDS             <1..1169
                     /locus_tag="VFD73_07435"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HZI73849.1"
                     /translation="AGALAASRVPGANERIRLGIIGPGARGKQLMQLALQCPGTEIAG
                     AADVYTRRLEEAKKLAPNARTYLDYRHLLEDKSIDAVLIATPQHLHCEHFVASLDAGK
                     HAYQEKTMAFSVEHAKKMREAWRRAGRRTVQIGHQGCSMGQIVDAIEFMKTGYVGKIT
                     EIHGHMYRNTPHGKPQWSRPILPDMTKENIIWSAFEGDAPRHEFDPNRYINWRFYWDY
                     SGGNFYENMCHQVAIWYKVLGLKIPAAVTTTGGIYLWKDGRQVPDTMMVTMQQPEEFL
                     FTWGSGFGNNQLGISEHVLGTDGTIINASEEDGPIRYLPQKVNRPGAAEIAGKTSTPV
                     TAHMQNFLDCIRTGKEPNCPFELGYRVAIATRMAVDSYRHGRTLRWDAAREEVV"
BASE COUNT          258 a          420 c          406 g          186 t
ORIGIN      
        1 tggccggcgc gctggcggca tctcgcgtac ccggtgcgaa cgaacggatc cgcctgggga
       61 tcatcggccc gggagcgcgg ggcaagcagc tcatgcaact ggcgctccag tgtcccggca
      121 cggaaatcgc cggagcggcc gacgtttaca cgcgacggct ggaggaggcc aagaagctcg
      181 cacccaatgc caggacgtac ctggattacc ggcacctgct ggaggacaaa agcatcgacg
      241 ccgtgctgat cgccacccca cagcatctgc actgcgaaca tttcgtcgcc tcgctcgatg
      301 ccggcaagca cgcctaccag gagaagacga tggcgttctc ggtggagcac gccaaaaaga
      361 tgcgcgaggc ctggcggcgt gccgggaggc gcaccgtgca gatcggccac cagggctgct
      421 cgatgggaca gatcgtcgac gccatcgagt tcatgaagac cggctacgtg ggcaagatca
      481 ccgagatcca cgggcacatg taccgcaaca cgccgcacgg aaagccgcag tggtcgcgtc
      541 ccatcctgcc cgacatgacc aaagagaaca tcatctggag cgccttcgag ggagacgcgc
      601 cgcgccacga gttcgacccc aaccgctaca tcaactggcg cttttattgg gactactcgg
      661 gtggcaactt ctacgagaac atgtgccacc aggtggccat ctggtacaag gtgctgggcc
      721 tcaagattcc ggccgcggtg accaccacgg gcggcatcta cctgtggaag gacggccgcc
      781 aggttcccga caccatgatg gtgacgatgc aacagcccga ggagttcctt ttcacgtggg
      841 gctccggttt cggcaacaac cagctgggga tttccgagca cgtgctgggc accgacggga
      901 ccatcatcaa cgccagcgag gaagacgggc ctatccggta cctgccgcag aaggtgaacc
      961 gcccgggcgc cgcggagatc gcaggcaaga cctccactcc cgttacggcg cacatgcaga
     1021 acttcctgga ctgcatccga acggggaaag agccgaattg ccctttcgag ctgggttacc
     1081 gcgttgccat tgccacccgc atggccgtgg acagctaccg gcacggacgc acgctgcggt
     1141 gggacgccgc gcgcgaagag gtggtgtaag cagcgccgtt ctcaggcgcc cgtccccgcc
     1201 ggcggccgca ggacgctcgg gaacccctgc cgccagcttg gatacagcgg ctgccagccc
     1261 agctcgcctc
//
LOCUS       DASRPQ010000635         4948 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2894179, whole genome shotgun sequence.
ACCESSION   DASRPQ010000635 DASRPQ010000000
VERSION     DASRPQ010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4948)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4948)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4948
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2894179"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..331)
                     /locus_tag="VFD73_07440"
     CDS             complement(<1..331)
                     /locus_tag="VFD73_07440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73850.1"
                     /translation="MHLGEEQIQRLLEHDGESFPGGHGQEHLQSCAECRARLAEAERE
                     ESWLFERLHLLDHPVPAVSLREVISRSRRRLPPWVRVAAGVLLAVATAGAAYAFPGSA
                     LPHWVERM"
     gene            complement(332..817)
                     /locus_tag="VFD73_07445"
     CDS             complement(332..817)
                     /locus_tag="VFD73_07445"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZI73851.1"
                     /translation="MSLQFDEDFERLFRTELPRLFRYLDRLSGEPDLAADLVQEAFVR
                     LHRRGEMPERPQLWLVTVALNLFRNARSTDSRRRRLLTGWAGSLSPPASPTGIEEGES
                     PSRVRAALKRLPSRDREMLLLRAEGYSYREISEALELREASVGTLLARAKRAFREVYE
                     G"
     gene            complement(867..3098)
                     /locus_tag="VFD73_07450"
     CDS             complement(867..3098)
                     /locus_tag="VFD73_07450"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HZI73852.1"
                     /translation="MLLGLLAAGHLITQGTQAQIAGVVRDAETGRPVAEAVVDLPDLD
                     RLVVTDSLGRYRFSDLSPGPQHLTVRRIGYAPRTLHALVPSDGRLQIDIALHPVPVRL
                     PNLVSHSGIALRGLEPADTTPFPDRHVSASAIRNDPLLSEPDGLLALGGGEVSSNLES
                     PEGVSVRGASSDETGYVLDGVPVFSPYHSAGLFSAWNPDALESVQLISSAPAMASPEV
                     LSGTIAAVTRTPGPALTTQGAVSTGQARLAVDGPIGHVGFLASLRTSFPDWAAPRNEA
                     SYLHGETHDLLGKLDAPFLSGSLGLLLYQTGNSIEPSIGADSTPARSDLRWSSRSAGV
                     RWLRHLGPTTTRLEVWSAGSDATALWIGGAASNVAARRRDLGLLASVERNAFGSATSA
                     GLKLQLSRTDYQAGDPAANRPAYQLKASMPIATLFVQHRRRLGSSWVEAVSASVVGAA
                     GDIWVSLQNQIRWQLSEALSVSATYLKAHQLSQSLRNSESVTGNIFPADLYVTAGANG
                     VPVARNDRYVLAGEYRPTGSLRLGVQAYVSSYDGLALVAPRSTAPFATNGFATGSATA
                     PGISVDAAWSAPHFGLVARYAWEQVQVEHADSTYTPSYGSDQRLDLGGIVFPSPTWSV
                     RLGLSGAFGRRATGVTGNFEWEACNLLDRGCEFLGTPETSGAPGGIRLPTYLRLDLGL
                     RKHWHLSLAGRDVMLAVYGSYSNLLGRTNVLTFVTDPASGTRSAVEMRPRAPLVVGID
                     WRF"
     gene            3211..4620
                     /locus_tag="VFD73_07455"
     CDS             3211..4620
                     /locus_tag="VFD73_07455"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HZI73853.1"
                     /translation="MGQLMMCLRTLSPPPFTVGILLFSLGACAGNGTRPAPSARDAFA
                     QEEETRQQGLALRENERQQSRLDDIAYPILSGGTPLCPGARARHLGARLATIQSYRRD
                     LQPAATQGLELGDTLTVLSVTYGGPAGDGGLRPGDRIIAADQTPITPGAGAVDQFTTM
                     VLADRRKSPEVSIALMRDGEPGHATVRLDEVCDYGSEVVESGDLNAFSDGKTISLTSA
                     MMRILSNDEIGALFAHEFGHAARGHVKARQSTPTTVFSPNQEREADYVALYAMALAEL
                     PLGAAPGLWRHMAQADPRRTGFAGRHPITPERFERIQQVMAEIQEKRAAKVALLPTPP
                     TAVIARSGNPLTQQIEVRPIPPGGMRGPEGEEYAPGGSAGRDDTTRGVDAGPEVQEAI
                     RNLVRLGISRKVQEVRPGLLRVTVGDSFDDQSAVGFQLRLLYTPYAESYGDNTTFELV
                     RGRVKIGEYTKDGLTLAAN"
     gene            4656..4919
                     /locus_tag="VFD73_07460"
     CDS             4656..4919
                     /locus_tag="VFD73_07460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73854.1"
                     /translation="MGISEDRRHPADTQEFLALWNSAKEEHFVQELAPLLPFLLGSPG
                     KLDRGRTTDAARHLVRAMHLASTAEGGVGAGMDYLSSVVETER"
BASE COUNT          920 a         1614 c         1627 g          787 t
ORIGIN      
        1 ccatccgctc gacccaatgt gggagcgccg agccgggaaa agcgtatgct gctcccgcgg
       61 tcgccaccgc aagtagaact ccggcggcca cccgcaccca gggcggtagt cgtcttcgac
      121 ttcggctgat cacctccctc agcgaaaccg ctggcactgg atggtccagc aggtggagtc
      181 gctcgaagag ccaggactcc tcccgctcgg cctcggcgag cctcgcccgg cactcagcac
      241 agctctgcag gtgctcctgg ccgtgaccgc cgggaaagct ctcgccgtca tgctccagca
      301 gccgctggat ctgctcttca cccagatgca ttcagccctc gtacacctct cgaaatgccc
      361 gctttgcccg agccagcaag gtcccgacgc tcgcttcgcg cagctccagc gcttcggaga
      421 tctcccggta actgtaccct tcggctcgaa gcagcagcat ctcacgatct ctcgacggca
      481 gccgtttcag tgctgcgcga acccgggacg gcgattcgcc ttcctcgatg cccgtgggcg
      541 acgctggagg cgaaagagat ccggcccacc ccgtcaggag ccgccgccgg cgcgagtcgg
      601 tcgacctcgc gttccggaac agattcagcg ccaccgtcac cagccagagc tgcggccgct
      661 ccggcatttc ccctctccga tgcagccgga caaatgcttc ctgcaccagg tccgccgcca
      721 gatcgggctc gcccgagagc cggtcgagat agcggaacaa gcggggaagt tcggttcgga
      781 acagtcgctc gaagtcctca tcgaactgca ggctcatgca ggaacctcga aaaggaaccg
      841 atcaatcgct tgatttgtga catcagctag aagcgccagt cgattcccac gacgagcggt
      901 gcacgagggc gcatctcgac ggcagaccgg gtgccggagg cgggatcggt gacgaacgtc
      961 aggacattgg ttctgccgag caggttgctg tagctgccgt agacggccag catgacgtct
     1021 cggcccgcaa gcgagaggtg ccagtgcttt cggagcccga gatccagcct caggtaggtc
     1081 gggagccgga taccgccggg agctccactc gtctccggtg taccgaggaa ctcacagccc
     1141 cggtccagca ggttgcaggc ttcccactcg aaattgcccg tcacgccggt cgcccgccgg
     1201 ccaaaggcgc cgctcaggcc gagccgaacc gaccaggttg gggagggaaa gacgattccg
     1261 ccgagatcca ggcgctggtc gctcccgtag gagggcgtgt acgtcgagtc cgcgtgctcg
     1321 acctggacct gctcccacgc ataccgggcg accagtccaa agtgcggcgc gctccacgcg
     1381 gcgtcgacgg agatacctgg cgcagtcgcc gatccggtgg cgaacccgtt ggtcgcaaac
     1441 ggagctgtgc ttctcggcgc caccaatgcc agcccgtcat agctgctcac gtaggcctgt
     1501 actcccagcc gcaacgagcc ggtgggacgg tactcccccg ccagcacata gcgatcgttc
     1561 cgggcgacgg ggacgccgtt ggcacctgcg gtcacgtaca gatcggcggg aaaaatgttt
     1621 cccgtcactg actcggaatt cctgagcgat tgggagagct gatgagcctt gaggtaggtt
     1681 gccgagaccg acagagcctc ggacagctgc cagcgaatct ggttttgcaa gctgacccag
     1741 atatcacccg cagcaccgac cacagatgct gagactgctt ccacccagga ggagcccagc
     1801 cttcggcggt gctgaacgaa cagagtggcg atcggcatgc tcgctttcag ctggtacgct
     1861 ggacggttag cagccggatc gcccgcctgg taatcggtcc ggctcagctg cagcttgagg
     1921 ccggcactcg tggccgagcc gaaggcgttg cgctcgacgc tggccagaag gcccagatca
     1981 cgccgacgcg ccgccacatt cgaagctgct cctccgatcc atagagcggt cgcatcggag
     2041 ccggcgctcc acacctccag ccgggtcgta gtcgggccga gatgccggag ccagcggaca
     2101 ccggccgatc ggctgctcca gcggagatca ctccgcgcag gcgtcgagtc ggctccgatg
     2161 ctcggctcta tggaattccc cgtctggtag aggagcaggc cgaggctacc gctgaggaac
     2221 ggcgcgtcca gtttgcccag gaggtcgtga gtttcgccgt ggaggtagga ggcctcgtta
     2281 cggggcgccg cccagtcggg gaagctcgta cggaggctgg cgagaaatcc gacatgtccg
     2341 atcgggccgt ctacggctaa ccgcgcctgt ccagtactca ccgcgccctg ggttgtgagc
     2401 gcggggcccg gagtccgagt aacagccgca atggtaccgg acaacacttc tggtgacgcc
     2461 atggctggag cagacgagat cagctgtacc gactccagcg cgtcgggatt ccaggcgctg
     2521 aacaatccgg cgctgtgata cggactgaac accggtacgc cgtccagcac gtacccggtc
     2581 tcatccgacg acgcacctct cacgctgacc ccctccggcg actcgaggtt actggagacc
     2641 tcgccgcccc cgagcgccag cagcccgtcc ggctccgaga gcaggggatc gttccggatg
     2701 gccgacgcgg agacgtggcg gtccgggaac ggtgtcgtat ccgccggctc cagaccccgg
     2761 agagcgatgc ctgaatgaga gaccaggttg ggaagccgga ccggcaccgg gtgaagggcg
     2821 atgtcgatct gcaatcggcc atcgctcggc accagcgcgt gcagcgtgcg cggagcgtag
     2881 ccgatgcggc gaacggtcag gtgttgaggc ccgggcgaga gatcgctgaa cctgtagcgg
     2941 ccgagcgagt cggtcaccac caggcggtcg agatccggga ggtctactac cgcctcggcc
     3001 acaggtcggc cggtttcggc atcccgtacc acaccagcga tctgcgcctg ggtcccttga
     3061 gtgatcaggt ggcctgcagc aaggagaccg aggagcatat ctgagaagct gaagcgctga
     3121 ccagccggcg acaatacgtc tagcgggggg tggggcaaca acgtagtatg ggggtagcca
     3181 cgcgttcaca acctccgagt ccagtccccc gtgggccagc tgatgatgtg cctccgcacg
     3241 ctatctccgc cgcctttcac cgtcggcata ctcctgttca gtctcggtgc ctgtgcagga
     3301 aatggcaccc gacccgctcc ctcggcgcgt gacgccttcg cccaggagga ggaaaccagg
     3361 cagcaaggcc tggccctcag ggaaaacgag aggcagcaga gccggctgga tgacatcgcc
     3421 tatccgatcc tctcgggcgg aacgccgctc tgccccggtg cccgggcgcg gcacctgggc
     3481 gcccgcctcg ccaccatcca gagctaccgg cgcgaccttc aacctgctgc cacccagggc
     3541 ctggagctgg gtgacaccct cacggtcctg agtgtcacct atggtggtcc ggcgggagat
     3601 ggagggctga ggccgggcga tcgcatcatc gccgcggacc agactccgat tacacctggc
     3661 gccggcgcgg tcgaccagtt caccaccatg gttttggcag accggaggaa aagtcccgag
     3721 gtctcgatcg cgctgatgcg agatggcgag ccggggcacg ccacggtgcg actggacgag
     3781 gtctgcgatt atggcagcga ggtcgttgag agcggcgatc tgaatgcctt ttccgacggg
     3841 aagaccatct cactgacatc cgccatgatg cgcatcctca gcaacgatga aataggcgcg
     3901 ctgttcgccc acgagttcgg gcacgccgcc agggggcacg tcaaggcaag gcagagcaca
     3961 ccaacaacgg tcttctctcc caatcaggag agagaagccg attacgtggc cctgtacgcg
     4021 atggcactgg ccgagcttcc gttgggcgcc gctccgggtc tctggcgcca catggcccag
     4081 gcggatcccc ggcgaaccgg ctttgccggc cgccatccga tcactcccga gcgcttcgag
     4141 cggatccaac aggtcatggc agagatccag gaaaaacggg cagccaaggt ggcgttgctt
     4201 cccaccccgc cgaccgcagt gattgcgcgc tccggcaatc ccctgactca gcagatagag
     4261 gttcgcccaa taccgccggg cgggatgagg ggaccggagg gcgaagagta cgcgccgggt
     4321 ggttcggctg gacgcgatga cacaacccgg ggtgtcgacg ccggccccga ggtgcaggag
     4381 gcgatccgga acctggtccg cttggggatt tcgaggaaag ttcaggaggt ccgcccggga
     4441 ctactccggg tgaccgtggg tgacagcttc gacgatcaga gcgcggtggg attccagctg
     4501 cgcctgctct acacgccata cgccgagagc tacggtgaca acaccacctt cgagctggtt
     4561 cggggtcgcg taaagatcgg cgagtacacc aaggatggcc tgaccttggc agcgaactga
     4621 ggctgccatc gactactcct cactcaggag agcgtatggg aatctcagag gatcggcgac
     4681 acccggcgga tactcaggag tttctggcgc tgtggaactc ggccaaggag gagcacttcg
     4741 tgcaggaact ggcgccgctg ctgccattcc tcctgggaag tccgggcaaa ctggaccgag
     4801 ggcggacgac cgatgccgcg cgtcatctgg tgcgcgccat gcacctcgcg tccaccgcgg
     4861 agggaggcgt gggggccggg atggattatc tgagcagtgt ggttgaaacg gagcggtgag
     4921 cggggttacg acggtacggc ggtaaggc
//
LOCUS       DASRPQ010000636         1841 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1640861, whole genome shotgun sequence.
ACCESSION   DASRPQ010000636 DASRPQ010000000
VERSION     DASRPQ010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1640861"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..380)
                     /locus_tag="VFD73_07465"
     CDS             complement(<1..380)
                     /locus_tag="VFD73_07465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73855.1"
                     /translation="MHRGMFHSSGWLQTVALLGALAACSGGKTPPTTSPAPKTGTTPR
                     NEAMAVPLSEPYERAVSQGTRTHTGTPGPRYWQQWSEYRLEAELNPISKRLAGKGSVT
                     YYNRSPDTLREVYVQLLDNIYAPNA"
     gene            561..1595
                     /locus_tag="VFD73_07470"
     CDS             561..1595
                     /locus_tag="VFD73_07470"
                     /inference="COORDINATES: protein motif:HMM:NF005214.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZI73856.1"
                     /translation="MAVSKKNGRWAGGSRKTGNAAAGESTAQSDRKLQRQAEARRKGG
                     SAQKSKKNGAVQAGARRHPESPLPKQHLEKPGREGDLQPRPQYQAPEYLGSSKLNGMA
                     ALITGGDSGIGRAVAVLFAREGADVAIVYLDEHDDAEETLRAVEAEGRRGLLIPGDVT
                     DWSFCQEAVTSAVNEFGRLDILVNNAAFQEHASSLEDISEEQLDRTFKTNIYGYFHMA
                     KAALPHLKEGSSIINTGSVTGIEGSKELLDYSATKGAIHAFTKSLAQNLVEQGIRVNC
                     VAPGPVWTPLNPADVEAEKVAQFGSDTEMKRPAQPEEVAPAYVFLAAPACSSYITGEI
                     LPVLGGTGGG"
BASE COUNT          365 a          536 c          629 g          311 t
ORIGIN      
        1 gcgttgggag cgtagatgtt gtcgaggagc tggacgtata cctcgcgcag ggtatccgga
       61 gaccggttgt agtaggtgac gcttcctttg ccggccaacc gcttcgagat gggattcaac
      121 tccgcttcca gacggtactc ggaccactgt tgccagtagc gcggcccggg agtgccggtg
      181 tgggtcctgg tgccctgcga aacggcacgc tcgtacggtt cggagagcgg aaccgccatc
      241 gcttcgttcc gtggtgtggt tccagttttg ggcgccgggc tggtggtcgg cggggttttc
      301 ccgccgctgc acgcggccag tgcgcccaga agagcgacgg tctggagcca gccggaagaa
      361 tggaacatgc ctcgatgcat cagggacccc gcaaagaagt aatcgaacgc gcaggtggcg
      421 cgggatgatg attggataga cgaaccgggg caagtcgggt ttcactggtc gggcctcggg
      481 tgagcgctat cacatctccc ggcggacaac tcagcgatca tcgccgtccc agagtgtttc
      541 acgaatttca gggaggtcac gtggcggtca gcaagaaaaa cgggcgttgg gccggtggtt
      601 ccaggaaaac cggcaacgcg gcggcaggcg agtccaccgc tcaatcggat cggaagctgc
      661 agcgccaggc agaggctcgg cgcaaaggag gctccgctca aaagtcgaag aagaacggcg
      721 cggttcaggc gggtgcccgc cggcatcccg agtcgccgct gccgaagcag cacctggaga
      781 agccaggccg ggaaggcgac ctgcagcccc gtccccagta tcaggcgcca gagtacctgg
      841 gctccagcaa actgaacggc atggcggcat tgatcaccgg cggcgattcg ggaatcggcc
      901 gcgcggtggc ggtgctcttt gcacgcgagg gtgccgacgt cgcaatcgtc tatctcgacg
      961 agcacgacga tgccgaggaa acgctacgcg ccgtggaagc ggagggccgg cggggtctgc
     1021 tcattccggg agacgtcact gactggagct tctgccagga ggcggtcacg tccgcagtca
     1081 acgagttcgg ccggctcgat atcctggtca acaacgccgc gttccaggag cacgcgtcct
     1141 cactcgagga tatcagcgag gaacagctgg accgaacctt caagaccaac atctacggct
     1201 atttccacat ggccaaggcg gcgctgcctc acctgaagga aggaagcagc atcatcaata
     1261 ccgggtcggt tacggggatc gaagggagca aggagctgct ggactacagc gccacgaaag
     1321 gggcgatcca cgcgttcacc aagtcgctgg cccagaacct ggtggagcaa gggatccggg
     1381 tgaactgtgt tgccccggga ccggtgtgga cgccgctcaa tccggcggat gtggaggccg
     1441 agaaggtggc gcagttcgga tccgacacgg agatgaagcg accggcccag ccggaggaag
     1501 tggccccggc atatgtcttt ctggccgcgc cggcctgctc cagctacatc acgggcgaaa
     1561 tacttccggt cctgggcggc accggcggag gctgaccgcg acgaaatgtc ccgcatggac
     1621 atcactgtag ccggcggagc ataactgctc cagaaacgat gacaccatga gggagttgct
     1681 atgtcgcatg gatggcttcg ccggctcagt tccggcggtg tcggattggc atttgccttt
     1741 ggtctgttga ccgccggcct gttacatctg ccgtatcagt cggcggctca acagcagggg
     1801 acgctgtcgc ggagcaatgt ttcctcctcc aagacaacga c
//
LOCUS       DASRPQ010000637         1131 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_389541, whole genome shotgun sequence.
ACCESSION   DASRPQ010000637 DASRPQ010000000
VERSION     DASRPQ010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389541"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..323)
                     /locus_tag="VFD73_07475"
     CDS             complement(75..323)
                     /locus_tag="VFD73_07475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73857.1"
                     /translation="MSRRPLWQYLIFHWARAVLGGLTALAVVAVLLRSFSPVSFVVWY
                     IAGATLGTVFISPRRWRRGQAQVHPARIDTQNRRGIGH"
BASE COUNT          182 a          365 c          363 g          221 t
ORIGIN      
        1 gacgccattg tccggtacgg tccagtcagt ccgtgagaaa gctgcgagag ggtctcactg
       61 ggatgtcgac ggaatcagtg acctattccg cgtcggttct gggtgtcaat gcgtgcggga
      121 tgcacttgcg cctggccgcg ccgccaccga cggggcgaga tgaagacggt ccccaaagtg
      181 gcgcccgcga tgtaccacac gacgaagctg acagggctga agctacgcag tagcactgcg
      241 acgacggcga gtgctgtcag tcctccaagt accgcgcgtg cccaatgaaa gatcaggtat
      301 tgccataggg ggcgccgact catccacgcc cactccttat cacgaagcag ccatctccag
      361 aagggtcgct ggctcatccc cacccactcc tacatcaggt catgacgcac aggcctgctg
      421 tacagaggcc gacatctcag catttgatac acgttgatgg cagccggtta ctcggccgtg
      481 tcggttgccg ggttcggcca gctcatctcg gggcatacgc ccgaattgcg taggccaggt
      541 tctcggtggg cggcgccgtc gtacgactgc cgcttttcag gccggacata accccagctg
      601 gcgcagatcg tgcgagtgtt gtgcgctgtc gccggtcgtt gctgtcagcc ggtggctcct
      661 gctgttgcta tcaccgttgc tgtcagctgc tggtccggtt cccaatctcc gaggtctccc
      721 cgggccgtga cagcgccctg tcctgcccag gcccctctcc cggacccgat agctgccgaa
      781 ccttatggca gacgggttct gtcatggggc ggcaaagccg atcacacagt gacgcggcag
      841 gcgcccttga caggctccgg ctgtcgtgaa cactcctacg gcgggttcgg gggaggccat
      901 ccccgtttcc gcccgcatac cgtctttcgg atccgagacg agccagggtc aggctattgc
      961 gcccccgggt gtgacttatc ctgcgctggc cggtgcccct ccggtgggag gcctttgagc
     1021 gagatgttcc cggcccggaa ctggcggaga cctgccggct ccgggccgga gcgggtcctc
     1081 agttcttgca gcccgcaatg ctgcctggcg gggcgcagtt gtcggggatg t
//
LOCUS       DASRPQ010000638         1045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2267686, whole genome shotgun sequence.
ACCESSION   DASRPQ010000638 DASRPQ010000000
VERSION     DASRPQ010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2267686"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            359..997
                     /locus_tag="VFD73_07480"
     CDS             359..997
                     /locus_tag="VFD73_07480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73858.1"
                     /translation="MAIRKRLTRRALFTGAATAVAIGASAGVALAVAITFTISPGGAI
                     TAKAGTTTLKDTNTGSVLTCTSSSSSGTLKKGSGIAGTNLGSITALSFSNCTGPLGLT
                     FTVSNSGFPWTLSGTSYNATTHVTTGFINGIKSHLSCPSCSADVAGATATAKGKVKVT
                     YTNSTGKLKVLPTGGNLHVFNVSGCAGLINSGDATQFSGTYTVTPKQKITSP"
BASE COUNT          212 a          356 c          315 g          162 t
ORIGIN      
        1 taggcgaggt agatcccatc atcgcccagg gccgcgctgg gggcaccggc ccagtagccg
       61 aggccaggcg cgggcggtgc gatcacgact gtggactcat cggggcgggg cagcagcgct
      121 gctcccgggc cctcggaaga tattctacta agcatatcgg aatactagac agttatcgtg
      181 gccgtacgct tggcgaatgt gacatcgccc ggctttgtcc atgcctgacc ccttgcgcgc
      241 aatgttacgt gccggtaacg tactcgccgg tagcctttcg gcgggtctga gcacatccca
      301 acgtaaggca tcctgatcgc cgggcggggt caggcagacc gatcaaggag aggcacgtat
      361 ggcgattcgt aagagactta cccgcagggc cctattcaca ggtgccgcga cggccgtggc
      421 gatcggcgca agcgccggcg tcgccctcgc agtagcaatc acgttcacaa tcagcccggg
      481 tggtgccatc accgccaagg ctggcacgac gaccctgaag gacaccaaca cgggcagcgt
      541 gctcacctgc acgtcgtcca gttcctcggg caccctgaag aagggcagcg gaatcgctgg
      601 gacgaacctc ggctcgatca ccgcgctgtc cttcagcaac tgcaccggtc cgctgggcct
      661 gacattcacg gtcagcaaca gtggcttccc atggacgctg agtggcacct catacaacgc
      721 caccacgcac gtcaccacgg gcttcatcaa cggcatcaag tcccacttgt cgtgcccgag
      781 ctgcagcgct gatgtcgccg gcgccaccgc caccgccaag ggcaaggtga aggtcaccta
      841 caccaacagc accggcaagc tcaaggtcct ccccaccggt gggaacctgc acgtcttcaa
      901 cgtcagcggc tgcgccggcc tgatcaacag cggtgacgcc acccagttca gcggcaccta
      961 caccgtgacc ccgaagcaga agatcacctc accgtaacga gcacgacggg ccgttagcgg
     1021 cctggagggg cagccaccgg actgc
//
LOCUS       DASRPQ010000639         2997 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4462535, whole genome shotgun sequence.
ACCESSION   DASRPQ010000639 DASRPQ010000000
VERSION     DASRPQ010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2997
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4462535"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..805
                     /locus_tag="VFD73_07485"
     CDS             <1..805
                     /locus_tag="VFD73_07485"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI73859.1"
                     /translation="LERRVAERSAAVRAVTAELETVLYSVSHDLRSPLRQLLGFSNLL
                     LEESVREPDVVALQYARRIHEAADRMTTLVDDLINVSRIGRQDIMRRPVQLTPLVEDV
                     IGQLRASTTGRTIDWQLDELPTVDGDPVLLKLALGHLLSNAVKFTRQRDRATIHVRPV
                     ESDGQIGLAVEDNGVGFKMTYAGKLFGLFQRLHRADEFEGNGAGLAIVQRVAHKHGGR
                     VWAEAEPDKGATFYLTLGTRAADSRATEEVGRPASRGGEEELRNDARAS"
     gene            802..1290
                     /locus_tag="VFD73_07490"
     CDS             802..1290
                     /locus_tag="VFD73_07490"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI73860.1"
                     /translation="MTAEPLGSSGSSSAPDVLLVEDNPLEIELTLRPLRELDPDSSIE
                     VARDGEEALDFLFGRGAFRHRSGAPTPRLILLDLKLPRVDGMEVLRALRANSRTSMVP
                     VVVLTSSDDPRELAQCYQLGANSCVQKPVRPEELRSCLQEVGRYWLALNQTPPPLLSP
                     LG"
     gene            1419..1847
                     /locus_tag="VFD73_07495"
     CDS             1419..1847
                     /locus_tag="VFD73_07495"
                     /inference="COORDINATES: protein motif:HMM:TIGR03562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family peroxiredoxin"
                     /protein_id="HZI73861.1"
                     /translation="MPTSKAEAVWEGVLKTGRGHFKAGSGAFEGDYTFATRFEGARGT
                     NPEELIAAAHAACLSMALSAELEKRRTPATRIRTTAACTVEKAGEGFRITRMKLEVRG
                     KVPGVDQAAFSNAAEAAKNGCPVSNALKGNVQFELDAKLE"
     gene            complement(1849..2736)
                     /locus_tag="VFD73_07500"
     CDS             complement(1849..2736)
                     /locus_tag="VFD73_07500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73862.1"
                     /translation="MRRWLIPTIALTLATSPLFGQSEAALKEYFEGRTVTPKLAMPGS
                     DDGVDVYPGTARPLDYSRYASRLKQYGTAIKSGEPTIVTKIKVKSRLIEFQLAGGGYG
                     TFGDETSSNVGITPAPKTKREKNLEAEADRETDPAKKRALREELDDLRSEREREDARN
                     RSAVTEAEEQRKQNIRERRLQSGSRFNLRYADRVPPEVLTPSGIMAALGQYVSFGPSA
                     ETNAGEPSSATAHPGPGALHKGMLVSEVDAVLGVPTSSAQRKEGSLTVTTRKYSASLG
                     QVSAEFVEGVLVRYTVTSD"
BASE COUNT          574 a          888 c          977 g          558 t
ORIGIN      
        1 gctggagcgg cgagtcgcgg agcggagcgc ggcagtccgg gccgtcacgg ccgagctgga
       61 gacggtcctc tactcggtat ctcacgatct gcggtcgccc ctgcggcagc tactaggatt
      121 ttccaacttg ctgctcgaag aaagcgttcg cgagcccgac gtggtcgctc tccagtacgc
      181 caggagaatt cacgaagccg ccgatcgaat gacgacgctg gtggacgatc tgatcaacgt
      241 gtcgcggatc ggccgacagg atatcatgcg ccggccggtg cagttgaccc cactggtcga
      301 ggacgtgatc ggccagctcc gtgcaagcac caccgggcgc accatcgatt ggcagctcga
      361 cgagctgccc acggtagatg gagacccggt tctgctgaag ctggcgctcg gccatctgct
      421 ctcgaacgcg gtcaagttta cccggcagcg tgaccgggca accattcatg tacggccggt
      481 ggagtccgac ggccaaatcg gccttgcagt ggaagacaat ggcgtgggat tcaagatgac
      541 ctacgcgggg aaactgttcg ggctgtttca gcggctgcac cgggccgacg agttcgaagg
      601 caacggagcc ggcctcgcca ttgttcaacg ggtcgcccac aagcatggtg gtcgggtctg
      661 ggccgaagcg gagcccgaca aaggcgcaac cttctatctc acgctgggga cgcgtgctgc
      721 tgacagccgg gccactgaag aagttggccg gccagccagc cggggaggag aagaggagct
      781 gcgcaacgac gcccgggcat catgaccgcc gagccgctcg gctcttcagg gagttcgtca
      841 gcgcccgatg tgctcctcgt cgaagacaat ccgctcgaga tcgagctgac gctccggccg
      901 cttcgagagc tggaccccga cagtagcatc gaggtggcgc gagatggaga ggaggcgctc
      961 gactttcttt tcgggcgcgg tgcctttcgc catcgaagcg gcgcgccgac cccccgactt
     1021 atcctgctcg atttgaaact tccgcgagtt gacggaatgg aggtgctgcg ggcattacgc
     1081 gccaactccc ggactagtat ggtccccgtc gtcgtcctca cctcctccga tgatcctcgg
     1141 gagctggcgc aatgctatca gcttggcgcc aacagctgcg ttcaaaagcc agtccggccg
     1201 gaggagctta ggtcctgtct ccaggaagtg ggccgctact ggttggccct caatcagacc
     1261 ccgccacctc tgctgtcgcc tctcgggtag tgaaccgcgg ctcctgggcg gtacgcggag
     1321 cgtcaccatc agattaggat ccttgcacga gccgtgagac ggctgacatg catttacctg
     1381 gcgagagaag tccgccaagc cagcaacctg gagaggacat gccaacgagt aaagcagagg
     1441 cagtgtggga aggagtactg aaaaccggac gaggccactt caaggccgga tcgggtgcct
     1501 tcgagggcga ctacacgttc gcgacccggt tcgagggtgc gcggggaacc aacccggaag
     1561 agctgattgc agccgcgcac gcggcctgcc tgagcatggc attgtcggcg gaattggaga
     1621 agcgccggac tccggcaact cggattcgaa cgaccgcggc ctgtaccgtc gagaaggccg
     1681 gcgagggatt caggatcacc cgaatgaagc tcgaggtacg aggcaaggtg ccaggggtgg
     1741 accaggcggc gttttccaat gcggctgaag cagccaagaa cggatgcccg gtctcgaatg
     1801 ccctcaaagg caacgttcag ttcgagctgg acgcgaagct ggagtagatc agtccgacgt
     1861 caccgtgtag cggacgagca ctccttcgac gaactcggcg ctaacctggc caagagaagc
     1921 tgagtacttg cgcgtggtaa ccgtgaggct cccctctttc cgctgcgcgc tcgatgtcgg
     1981 aacaccgagc accgcgtcga cttcgcttac cagcataccc ttgtgcaggg cacctggacc
     2041 gggatgggca gtggcggagc tgggctcgcc ggcattggtt tccgccgacg ggccaaagct
     2101 gacgtattgt cccagggcag ccatgatgcc ggaaggagtc agcacttccg ggggcacccg
     2161 gtcggcataa cggagattga agcgagatcc actttgtagg cgccgctcgc ggatgttctg
     2221 cttgcgctgc tcctccgcct cggttactgc ggaccgattc cgggcatctt cgcgctctcg
     2281 ctccgatctc aaatcatcga gctcctcgcg cagggcgcgt ttcttagcgg gatcggtttc
     2341 ccgatcagcc tccgcttcca ggttcttctc tcgttttgtc ttgggagctg gggtgatgcc
     2401 cacgttggag gacgtctcgt cgccgaaggt gccgtagcca ccgccggcga gttgaaattc
     2461 gatcaggcga gacttcacct tgatcttggt cacgatggta ggctcccccg acttgatggc
     2521 ggtgccatat tgcttgagcc gactggcata tcgggagtaa tccagtggcc gggcggttcc
     2581 agggtagacg tctacaccgt catcgctccc gggcatcgct agcttggggg tcactgtacg
     2641 cccttcgaag tactctttca gggcggcctc agattgcccg aagaggggtg aggtggccag
     2701 agtgagcgcg atcgttggga taagccatcg gcgcacggtg tgtcctctca agtgcggggc
     2761 atgaaaccta gggggggacc atcggcaacg gaaatgttga gtagcccgga cggattctgg
     2821 ggagttgatg ccgaggcagc gtttgtattc tgtatacata attctgaatg acgagggagc
     2881 ttgatcacac gaactccgct acgggatgag gtgtaccgcg agatcgtcga gctgatccat
     2941 cgcggcgatc tccaaccagg aacgcgggtt aaggacacct ccctagccgc tcaactc
//
LOCUS       DASRPQ010000640         1196 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3216408, whole genome shotgun sequence.
ACCESSION   DASRPQ010000640 DASRPQ010000000
VERSION     DASRPQ010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1196
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3216408"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(82..1101)
                     /gene="waaF"
                     /locus_tag="VFD73_07505"
     CDS             complement(82..1101)
                     /gene="waaF"
                     /locus_tag="VFD73_07505"
                     /inference="COORDINATES: protein motif:HMM:TIGR02195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HZI73863.1"
                     /translation="MLHSSSAPNVLAVRFSSIGDVLLTTPLLRAIRASYPASRITLLT
                     KAVHAPLLSHNPHVTQVIGIESETSLTALAGKLRSGGYSHLLDLHDSLRSRALRALVP
                     GHWTTYPKHRLARTLLIHGKRDWYPDWKPVAERYFSAARQLNVTPDGGPPDFFLGPDS
                     KQEVEQWLESTQLGQERPIVAVAPGAAHATKRWPAGHWEALIRRLRDNGFDVVIVGGA
                     DDQVVAAVLTAQTCGVVSAAGQFGLQGTGALLQRSVALISGDTGVMHMATGVGTPVLA
                     LFGPTVRQFGFFPYTPAAKVIELDLACRPCSSKGGPRCPLGHHRCLGDISPEMVLGSL
                     REMVS"
BASE COUNT          232 a          372 c          380 g          212 t
ORIGIN      
        1 cgaagattcc gccgcgctta ggaccgcgtc cggtctgcgg caacagctcc agcagcgcac
       61 tcgcggctgg gtcccacccg ctcacgacac catctcgcgt aacgagccca gaaccatctc
      121 ggggctgata tcccccaggc agcgatgatg acctagggga cagcgtgggc ctcccttgct
      181 gctgcacgga cggcaggcga ggtccagctc gatgactttt gccgccggag tgtatgggaa
      241 gaacccaaac tgtcgaacag taggcccaaa gagtgccagc accggagtgc cgacgccggt
      301 cgccatgtgc atgaccccgg tatccccgga gatcagcgcc accgagcgct gcagcagggc
      361 tccggtccct tgcaggccga actgtcccgc cgcactgacc actccgcagg tctgggctgt
      421 gagtaccgcc gcaacaacct ggtcatcggc cccgcccacg atcacgacgt cgaaaccgtt
      481 gtcgcgaagc cgacgaatga gggcctccca gtggcccgcc ggccagcgtt tcgtcgcatg
      541 ggcagctccc ggtgcaaccg cgacgatcgg gcgctcttgt cccaactgag tgctctcgag
      601 ccactgttcc acttcctgct ttgagtccgg gcccaggaag aagtcgggtg gtccgccgtc
      661 cggtgtgacg ttcaactgcc gggcagcact gaagtagcgc tcggcgacgg gcttccagtc
      721 gggataccag tctcgtttgc catggatcaa taacgttctg gccaggcgat gcttcggata
      781 ggtggtccag tgccccggaa ccagtgctcg cagtgcgcgg cttctcaagc tgtcgtgaag
      841 gtcgagaaga tggctgtagc cgccagatcg aagcttgccg gccaatgcgg tgaggctggt
      901 ttccgattcg atcccaatga cctgggtcac atgaggattg tggctcagca gcggcgcgtg
      961 aaccgctttg gtgagaagcg taatgcgtga agccggatag ctggctcgaa tggcacgaag
     1021 gagtggggtg gtcagaagga catcgccgat cgagctgaaa cgcacggcca ggacgttcgg
     1081 tgccgaagag gagtggagca cggcgggaag gtacttggtg aaccgagaag cgtaaaccgg
     1141 tttaccgttc gccgttcacg cctttacttt ccagcatgcc ccgcccaaaa agcatt
//
LOCUS       DASRPQ010000641         2043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3520913, whole genome shotgun sequence.
ACCESSION   DASRPQ010000641 DASRPQ010000000
VERSION     DASRPQ010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3520913"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            330..1835
                     /locus_tag="VFD73_07510"
     CDS             330..1835
                     /locus_tag="VFD73_07510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73864.1"
                     /translation="MSQSLTERYDARIAGVLSCYDRVMITGTLPTICHAAGMAQYLQL
                     NEIPIFDYATFAQELNGQVRERAAALAAEAGVRIEHINKAHIRKEDVVARVLAQRGEH
                     PGLVHIISAMEGCTSYRPRYDAETGRALLRPGTGKCLHYYFYFIDPAFGLIHLRVPTW
                     CPFRLQFYCNGHSWLARQLTAEGIGYSLADNAFTRIDDWQRAQDLADSFSPEHLHRAL
                     DRYAAQCCPVIETFGQDYHWSLMEVEYATDVVFRAAATLNPLYEQLIRQSVLNVKAEQ
                     VASFLGQRITPRLDQAVDTRFSTRIEGTCIKHRFGKASLKMYDKAGLVLRIETTANDV
                     SFFQHHRLVEHRQGPPSRALAPVRKTIYSLGCLREILLGCNRRYLAHLSALDDVSAGV
                     RALDRLTRPRTVDGKTVKGVNFFEPVDKALLHALQSPRVNIAGVRRGDLAAELEMISP
                     SRLSRQLRRLLDLGVIKRVVGTYRYYLTQIGRAAIAAAEQLTQTVIIPAMV"
BASE COUNT          362 a          657 c          654 g          370 t
ORIGIN      
        1 ccttggcaag acctggaaat tttcctggca cagccaagcc tccttccgga tgcgacatta
       61 catgtgtgca ccccgtaggg acaagccggg ccatgacggt ctgagccacg gccgcggcgg
      121 atcgtttccg ggatgtgtaa agtcgatagg gcgcgtcccg gccatccacc tccgccgttg
      181 aagcgcagat gccgcgactg ccgcccagcc ataacgagag gagggaaaga gcttgctctg
      241 ccaggtccct taatcctgag ccggcggagc cggaaccaag aagcgtggta tacgcttcgc
      301 tgcgataatc ggatttgcga ggggcgttca tgagccaatc cctgaccgag cgttacgatg
      361 cgcggatcgc cggcgtgttg tcctgctacg accgggtgat gatcaccggc acgttgccca
      421 cgatttgcca cgcggcgggt atggcccagt atctccagct caacgagatc ccgatcttcg
      481 actacgcgac gttcgcgcaa gagctgaacg ggcaggtgcg cgagcgtgcc gctgccctgg
      541 cggccgaggc cggggtgagg atcgagcaca tcaacaaggc ccatattcgc aaggaagacg
      601 tggttgcgcg tgtgctggcg cagcgaggtg agcatcccgg cctggtgcac atcatctcgg
      661 cgatggaagg ctgcaccagc taccgccccc ggtacgatgc cgagaccggg cgcgccttgc
      721 tccgcccagg caccggcaaa tgcctgcact actatttcta tttcatcgac cccgcattcg
      781 ggctgatcca tctgcgcgtc cccacctggt gcccgttccg gctgcaattc tactgcaacg
      841 gccatagctg gctggcccgg cagctcaccg ccgaaggcat cggctacagc ctggccgaca
      901 acgccttcac ccggatcgac gactggcagc gcgcccagga cctggccgac agcttctcgc
      961 cggagcacct gcaccgggcg ctggaccggt atgccgcgca gtgctgcccg gtgatcgaga
     1021 cgttcggcca ggattatcat tggagcctga tggaggtgga atacgccact gacgtggtgt
     1081 tccgcgccgc cgcgacactg aacccgctgt atgaacaact gatccgccag tcggtgctga
     1141 acgtgaaagc cgagcaggtc gcgagcttcc ttggccagcg gatcaccccg cgcctggatc
     1201 aggcggtcga tacccggttc tcgacccgga tcgaggggac ctgcatcaag catcgcttcg
     1261 gcaaggcgtc gctgaagatg tatgacaagg ccggccttgt gctgcggatc gagaccacgg
     1321 ccaacgatgt ctcctttttc cagcaccacc gtttggtgga acaccgccaa ggtccgccca
     1381 gccgggcctt ggctccggtc cgaaagacca tctacagcct gggatgcctg cgcgagatct
     1441 tgctgggctg caatcgccgc tatctggcgc atctgtcggc cctcgatgac gtttctgccg
     1501 gggttcgcgc cttggaccgg ctgacccggc cgcgcacggt cgatggcaag acggtcaagg
     1561 gggtcaactt cttcgagccg gtcgacaagg cgctgctgca cgccttgcag agcccgcggg
     1621 tgaacatcgc cggcgtccgg cgcggtgacc tggcggcgga gctggagatg atctcgccgt
     1681 cccgcctgtc gcgccagttg cggcgattgc tcgaccttgg ggtgatcaag cgggtcgtgg
     1741 ggacgtatcg ctattacctc acccagatcg gtcgtgccgc gatcgcggca gccgaacagc
     1801 tcacccagac ggttatcatt ccggcgatgg tttgatggga ttttttgatg cagaaaatgg
     1861 caagagttcg ggggtaagaa actgatcact atgacgccgg ccccggcata cgggccgccc
     1921 ggatgagccc cgggcgccgg ctcgccattc gggacagaca gcaagggccg tcaggtcttg
     1981 ggcgtaccct gctgggcggg cgcggctttg ccggctgaac ccccgggctg tatccccagt
     2041 tcc
//
LOCUS       DASRPQ010000642         2233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3521026, whole genome shotgun sequence.
ACCESSION   DASRPQ010000642 DASRPQ010000000
VERSION     DASRPQ010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3521026"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..450
                     /locus_tag="VFD73_07515"
     CDS             <1..450
                     /locus_tag="VFD73_07515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HZI73865.1"
                     /translation="RGALGPWGEPLIKQFVREAVDEALKLETALSRLRTERKVALLHY
                     SPIAETVTGEPPEIYPYLGSSRLEEPLSRYPVDVVFHGHAHHGATEGRTRGNVPVYNV
                     STMLLQRTYPNRPGFRVVELTVNPVAEVESGVPGVTPLRRVTDRPGA"
     gene            complement(428..1879)
                     /locus_tag="VFD73_07520"
     CDS             complement(428..1879)
                     /locus_tag="VFD73_07520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HZI73866.1"
                     /translation="MAQIQSERSAGTRIERDPLGEKAVPASALYGIQTLRASENFPIS
                     GLRPLPAFIDAVIWIKRSAALVHKQTGRLEARLADAIVRAADEVLGGQHRDQFIVDVY
                     QAGAGTSHNMNCNEVLANRANELLGSSRGSYQPVHPNDHVNMAQSTNDVIPTAMRLAA
                     LATLPSLLAGMERLSRSLLAKGKQFDAIVKSGRTHLQDATPIRLGQEFTAYGHTVARH
                     QEKLSQAADWVRELNIGGTAVGTGINAEKQYARLMVQELARISRLELRPGRDLVQLMQ
                     SMGDIATLSGALRAYVLDLNKIANDIRLLASGPRTGLAEIMLPAVQPGSSIMPGKVNP
                     SIAEMVNQVCYQALGLDTTIALASEAGQLELNVMMPVIAHNLVFALIIMGNASAVLAE
                     RCVDGIEADEAQCAYWLERSPALVTALAPRIGYAEAAKLAKEAIATGLTVKDLVMKKR
                     VLEGQELEEVLDLRAMTEPGVPGESELKRQADR"
     gene            1901..>2233
                     /locus_tag="VFD73_07525"
     CDS             1901..>2233
                     /locus_tag="VFD73_07525"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZI73867.1"
                     /translation="MTDYFKSVEATARYAADKPTKVDLFVGQHLFVGLNCFEPGQSQR
                     VHTHGGADKFYLVLQGKASMIVGDETCEVGAGTVVWAPAELPHGVAGVSERTLMLVAI
                     GPPPAISRS"
BASE COUNT          418 a          699 c          692 g          424 t
ORIGIN      
        1 cgcggcgcac ttggcccctg gggcgaaccg ctgatcaaac agttcgtgcg tgaagcagtg
       61 gatgaagcgc tgaagctgga aaccgccctg agccgcctcc gcactgagcg caaggtagcc
      121 ttgcttcact attcaccgat cgcggagacg gtgacgggag agcccccgga gatctatccc
      181 tacctgggtt caagccgact ggaggaaccg ctcagccgct atccggtaga cgtcgtcttc
      241 cacggccatg cgcatcatgg ggcgacggaa ggccgcaccc gcggaaacgt gcctgtctac
      301 aatgtctcca ccatgctgct tcagcgcacc tatccgaacc gaccggggtt tcgcgtggtc
      361 gagctgacgg tgaacccggt ggcagaagta gagagtgggg tgcctggagt gaccccgctg
      421 cgcagagtta ccgatcggcc tggcgcttga gctcggactc acccggaacc cctggctcgg
      481 tcatcgcccg gaggtcgagc acctcctcca gttcctgacc ctcgaggacg cgtttcttca
      541 ttacgagatc cttcaccgta agaccggtgg cgattgcctc tttcgcgagc tttgccgcct
      601 cggcataccc gatcctgggg gccagcgcag tgaccagcgc ggggctccgt tccagccaat
      661 aggcacactg cgcttcgtct gcctcgatgc cgtccacgca gcgctctgcc aacaccgcgc
      721 tggcattccc catgatgatc agcgcgaaca ccaggttatg ggcgatgacc ggcatcatca
      781 cgttgagctc cagctgcccc gcctctgacg ccagagcgat ggtggtatcc agtcccagtg
      841 cctgatagca cacctggttc accatctccg caattgacgg gttcaccttg cccggcatga
      901 tgctgctgcc gggctgcact gccggaagca tgatctcggc caatcccgtt cgagggccgg
      961 aggcgagcag ccgaatgtcg ttggcgatct tgttcagatc caggacgtac gcgcgcagcg
     1021 caccactcag ggtcgcaatg tcgcccatcg attgcatcag ctgcaccagg tcgcggccgg
     1081 gccggagctc caggcgactg atgcgggcca gctcctgcac catcaaacgg gcatactgct
     1141 tttctgcgtt gatgccggtg cccactgcgg tgccgccgat gttcagctct cgtacccagt
     1201 cggcggcctg gctcagcttc tcctggtgcc gggcgaccgt atgaccgtaa gcagtaaact
     1261 cctgacccag tcggatggga gttgcgtcct gcaggtgggt acgacccgat ttcacgatgg
     1321 cgtcgaactg cttgcctttg gcgagcaggg agcgcgacaa gcgttccatg ccggccagaa
     1381 gcgaaggcag agtggcaagc gcagcgagac gcattgcggt aggaatcacg tcgttggtgc
     1441 tctgggccat gttgacgtga tcgttcgggt gcaccggctg atagctgcct ctcgagctgc
     1501 ccagaagctc gttcgcccgg ttggccaata cctcgttaca gttcatgttg tgactggtac
     1561 cggcaccggc ctggtacaca tccacgatga actgatcccg atgctgacct ccgagcactt
     1621 cgtccgccgc gcgcacaatg gcgtccgcca gacgagcctc caggcggccg gtttgtttgt
     1681 gaaccagggc ggcagatcgt ttgatccaga tcacggcatc gataaacgcc ggaagcggac
     1741 gcaaccctga aatggggaag ttttcggagg cgcgaagcgt ctgtatgccg tacaaagcgg
     1801 aggcgggaac agctttttca cccagcgggt cgcgctcgat gcgggtgccg gcagaacgct
     1861 cggattgaat ctgagccact cacaattccc ggaatggacg atgaccgatt acttcaaatc
     1921 agttgaggca accgcccgct atgccgccga caaaccgacc aaagtcgatc tttttgtggg
     1981 gcagcacctg ttcgtcgggc tcaattgttt cgagccggga cagtcacagc gggtacacac
     2041 ccacggcggg gccgacaaat tctatctggt cctccaggga aaggcgagca tgatcgtggg
     2101 agatgaaact tgcgaggtgg gcgcaggcac ggtggtgtgg gcacccgcag agctgccgca
     2161 cggagtggcc ggtgtcagcg agcggaccct gatgctggtt gcgatcggtc caccacctgc
     2221 gatcagccgc tcg
//
LOCUS       DASRPQ010000643         2550 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1013978, whole genome shotgun sequence.
ACCESSION   DASRPQ010000643 DASRPQ010000000
VERSION     DASRPQ010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2550
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1013978"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            638..>2550
                     /locus_tag="VFD73_07530"
     CDS             638..>2550
                     /locus_tag="VFD73_07530"
                     /inference="COORDINATES: protein motif:HMM:NF013124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043531 - ADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NB-ARC domain-containing protein"
                     /protein_id="HZI73868.1"
                     /translation="MTSAKPWLQLGNLPIDSTSFVGRRRELSEARRLLGDARLLTLTG
                     VGGVGKTRLALRLAADVRRTFPDGVWLADLAELRDGELVPQTVIAALGLRDDSPRLPG
                     DTLLEYLADKQLLLVLDNCEHLRDACAVLAAKLLSHAEGLRILATSRQLLNVQGEQVL
                     EVPPLSIPDRDWHSAAGSLIEYEAVRLFAERAAGVVPSFAITPDNGPVVARLCQGLDG
                     IPLAIELAAARSRVLSAEQILERLDDRYRLLTGGSQTALERHQTLRAAMEWSHELCSP
                     QEQILWARLSVFAGGFDLEAVEQTCADEDIAQQDVFQLVTGLVDKSILDREEHGSRVR
                     YRLLETIRQYGQTHLTESGQGRSLRRRHRDSYHDLAVRADAAVMSSRQTEWLLRLRPD
                     PANIRVALESCLTEPGHAQASLQIASALQYYWLFHGLLREARQWLTRALELDPRPTVI
                     RSKALSTAAFVVLLQGDIDAALPLRDEGNALAQRLHAERALAHAIHICGMTAWAQGDL
                     HCAIPLLTDALERSRTAGDDPTETFIDQLFLAMTTALLGDARSAACSAETLKAAQSAG
                     AEWSIAWAKWVVGLHHWSQGDNREATALFQDALRLHRTFSNEWGYAWCIEALAWTAAN
                     DAHYERAARLLGAT"
BASE COUNT          425 a          805 c          853 g          467 t
ORIGIN      
        1 gaccaacccc tgccgtgcgt catcggagat gtgatcgttc acctttcggg cgagaaggct
       61 gagcagcgga tgcgtgcagg ccggatggtc gctccaccgt tcaccggcaa ggtatgacgc
      121 gaactccatg aagcatgcgc catgacgtgg tcggcggtgc ttgccccgag acagcagtgg
      181 gaggtaatcc gtcgaatccg cacgcttgct caacatggca accacatcca ttcgcggctc
      241 gctcggtacc agtctgcacc cgtcagcggt atgcgtgtca tctttttgtg cggttccagg
      301 gtcggctgat ttggtccatc aacagcgggg gctggtacgc cgagccatcg cgtccaaatt
      361 gcggcctgcg ggacgcggac gccgatggtc tgcccgccgt cggtgtacgc gcgtgaggtg
      421 ctggctcggc gtacctcgcc atcagagttt tcccacctat tgttgggaag actctcgcct
      481 cccatcagca atggtcacgt ggccggcgat gtgccgcttg ggcgcggcgc gattccacaa
      541 accgaatggg gtgctggaac tcgtcgaggc gtactcgcga cagctaccga gccagcctcg
      601 cttaggccag catcgcaagc gtagctttga aggtgtcatg acctcggcaa agccgtggct
      661 tcagctcggc aacctaccca tcgacagcac gagtttcgtc ggtcgtcgac gggagctgtc
      721 ggaggcccgg cggctcttgg gtgatgctcg gttgctgacg ctgacgggtg tcggcggggt
      781 ggggaagacg cggttggcgt tgcggttggc ggccgacgtg cgtcgcacgt tcccggatgg
      841 ggtgtggctg gctgatctgg ccgagcttcg ggacggtgag ctggtgccac agaccgtgat
      901 agcggcactg ggactgcgtg atgactcgcc acgcctgcca ggagacacgt tattggagta
      961 tctggcggac aagcagttgt tgttggtgtt ggacaactgc gagcatctgc gcgatgcgtg
     1021 cgcggtcctg gccgccaagc tgctcagcca cgcggagggt ttgcggatcc tcgccacgag
     1081 ccggcagctc ctcaatgttc agggtgagca ggtcctggag gtgcccccac tgtcgatccc
     1141 ggatcgtgac tggcattcgg ctgcggggtc cctgatcgag tacgaggcgg taagactgtt
     1201 cgccgagcgg gcggccggcg tggtgccgag tttcgccatc acgccagaca atggtccggt
     1261 agtggctcgc ctgtgccagg ggttggatgg gatcccgctg gcgatcgagt tggccgcggc
     1321 gcggtcgcgg gtgctgtcgg cggagcagat cctggaacgg ctcgatgatc gctaccgcct
     1381 gttgaccggg gggagccaaa ccgcgctcga gcgtcaccag acattgcggg cggcgatgga
     1441 gtggagccat gaactctgct ctccccagga acagattctg tgggcgcggt tgtcggtatt
     1501 cgccggcggg ttcgacctgg aagccgtcga gcagacctgc gccgacgagg acatcgcgca
     1561 gcaggacgtc tttcagttgg tgactggcct ggtcgacaag tcgatcctgg accgggaaga
     1621 gcacggttcg cgggtgcggt accgactgtt ggagaccatc cgccagtacg gtcaaacgca
     1681 cctcaccgaa tccgggcagg gaagatcgct acggcgccgg catcgtgact cctaccacga
     1741 cctggccgta cgagccgatg ccgcggtcat gagttcccgg cagacggagt ggttgctgcg
     1801 cctgcggccg gatccggcca acatcagggt tgcgctggag tcctgcctga cagagcccgg
     1861 ccacgcccag gccagcctcc agatcgccag cgccctccag tactactggc tctttcacgg
     1921 gttgctgagg gaggcccgcc aatggctcac ccgcgcactc gagcttgacc cacgcccgac
     1981 cgtcatccga tccaaggcat tgtcgacggc cgcttttgtc gtcctccttc agggcgacat
     2041 agacgccgca ctgcccctac gggacgaagg caatgccctc gctcagcggc tgcacgccga
     2101 gcgtgcgctc gcccacgcca tacacatctg cggcatgacc gcgtgggccc aaggcgacct
     2161 ccattgcgcg atcccactgc tgaccgacgc actcgaacgg tcccgcaccg cgggcgacga
     2221 cccgaccgaa acattcatag accaactctt cttggccatg acaactgcgt tgcttggcga
     2281 tgcccgttcc gccgcgtgca gcgctgagac cctgaaggcg gcgcagagcg ccggagcgga
     2341 gtggtcgatc gcctgggcaa agtgggtcgt cggtctccat cactggagcc agggcgacaa
     2401 tcgggaggcc accgccctgt tccaggacgc gctgcggctg caccgtacct tctccaacga
     2461 gtggggttac gcctggtgca tcgaggcact cgcttggact gcagccaacg acgcacacta
     2521 tgaacgcgcc gctcgactcc tcggcgccac
//
LOCUS       DASRPQ010000644         2440 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4147629, whole genome shotgun sequence.
ACCESSION   DASRPQ010000644 DASRPQ010000000
VERSION     DASRPQ010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4147629"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..199
                     /locus_tag="VFD73_07535"
     CDS             <1..199
                     /locus_tag="VFD73_07535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73869.1"
                     /translation="VRYISPVAQAGLYVTLGDTDAAFEWMDRAYQDRRGWLAYLKIEP
                     MLDGIRLDPRFNRLLERMRLT"
     gene            261..635
                     /gene="ytxJ"
                     /locus_tag="VFD73_07540"
     CDS             261..635
                     /gene="ytxJ"
                     /locus_tag="VFD73_07540"
                     /inference="COORDINATES: protein motif:HMM:TIGR04019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol system redox-active protein YtxJ"
                     /protein_id="HZI73870.1"
                     /translation="MQKIATEADVATALAQPLAVVYKHSPICPSSNMAYEEMRSLRRL
                     HSDVPLYLVDVVHSRPLSRAIAEKVGVVHQSPQAIILRAGVAAWHGSHFELRADDMSR
                     TLEALKVGDPPLQGGAASGDTA"
     gene            complement(765..1064)
                     /locus_tag="VFD73_07545"
     CDS             complement(765..1064)
                     /locus_tag="VFD73_07545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73871.1"
                     /translation="MIFVQHRVPILRQRIRQLGRQGKIELTSRAALLDRWSGSWMRFV
                     IDNEDSRSASGVLPGLGIIRLPSRLLRIPVWLWNDGSKPIWRRRHRQGWITRALR"
     gene            1047..1523
                     /locus_tag="VFD73_07550"
     CDS             1047..1523
                     /locus_tag="VFD73_07550"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZI73872.1"
                     /translation="MLHEYQVGPPLVEDATDPGGDLGLGGATDASAVRELIARVQELL
                     LRTRRLPATAPTGWAGTIRFGSVMVEPSTQTVLRGGQPVRVTHTEFRLLLALMRRRGA
                     IASRIELLREVWGAGTAVSRRAVDTHIARLRRKVEDDPANPRHILTALAWGYRFRP"
     gene            1611..>2440
                     /locus_tag="VFD73_07555"
     CDS             1611..>2440
                     /locus_tag="VFD73_07555"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HZI73873.1"
                     /translation="MAQLWFSRSRYELRLACLAVAALTLLPGAMRAQQPVTLTGKVTS
                     EQGTPLASAGVIIEQLGAGAVTRPDGTYTILIPGARVPSGPVTVTARLVGYKARSAQV
                     DLSSGSAAQDFSLADNPLQLGELVVTGAGTVSEVEKLGTGRSAIDSLSIVRSAEPNVV
                     NALAAKAPNVTITSSSGDPGASASILIRGQTTISAGSGLSGADAQPLIIVDGVPIDNS
                     ISYNNPSSGAINSSAAPSNRAIDINPNDIENVEVLKGAASGAIYGSRAGQGVIIITTK
                     "
BASE COUNT          451 a          809 c          748 g          432 t
ORIGIN      
        1 ggtgcgctac atctctccgg tggcacaggc cggcctgtat gtcaccctgg gcgacacgga
       61 tgctgcattc gagtggatgg accgtgccta ccaggaccgg cgcggctggc tggcgtatct
      121 gaagatcgag ccgatgctgg atggcatcag gctggatccc cgattcaacc gcctgctcga
      181 gcgtatgcgc ctgacgtagg tgtttcgaac aaacagccaa gactcaccac tttttgactg
      241 tggtgaattc tgggagacac atgcaaaaga tcgcgactga ggcggatgtg gcgacggcgt
      301 tggcgcagcc gctggcggtg gtgtacaagc acagccctat ctgtcccagc agtaacatgg
      361 cgtacgagga gatgcgttcg ctgcggcggc ttcacagcga tgtgccactc tatctggtgg
      421 atgtcgtgca ctcgcggccg ctctctcgtg ccatcgcaga gaaggtggga gtcgttcacc
      481 agtcgcccca ggccatcatt ctccgggccg gtgttgcggc ctggcacgga tcgcatttcg
      541 aattgcgtgc cgacgatatg tcgcggacgc tggaggcact gaaagtgggc gaccctccgc
      601 tgcaaggcgg agcagcctct ggagacaccg cctagcgctc gcaatgaaac aattgccacg
      661 cgtcggtaat tgaaccgttg cgcggcttca tacccctgaa actgcagttc acgccttgcc
      721 agagcgtttc acgcccttcc tgttctcgtc cccgccggca ccatctatcg tagcgctcgg
      781 gtgatccagc cctgacggtg tcgtcgccgc catatcggtt tcgatccgtc gttccacagc
      841 cacaccggaa tcctcagcag cctgctcggc aaacggatga tgccgagccc aggcagcacc
      901 ccggaggcgc tacgcgaatc ctcattatcg atgacgaatc gcatccagct cccgctccag
      961 cggtccagga gggcggcgcg gctggtgagc tcaatcttcc cctggcgccc gagctgccgg
     1021 atccgttgcc ggagaatggg cactcggtgc tgcacgaata tcaagtaggt cctcctctcg
     1081 tcgaagacgc cactgatccc ggcggagacc tcggcctagg cggcgccacc gacgcctcgg
     1141 cggtccgcga gctcatcgct cgagtgcaag agctgctgct ccggacccgt cgtctccccg
     1201 ccaccgcacc caccggctgg gccggcacca ttcgcttcgg cagcgtcatg gtagagccct
     1261 ccactcagac ggtgctgcgt ggcggccagc cggtccgggt gactcacacc gaattccggc
     1321 tgctgcttgc actcatgcgg cggcgcggag ccatcgcatc acgcatcgag ctcctgcgcg
     1381 aagtgtgggg cgccggcacc gcggtcagcc gccgggccgt tgatacgcat atcgctcggt
     1441 tgcgccgcaa agtcgaagac gatccggcca atccgcggca catcctgacc gcgctcgctt
     1501 ggggataccg cttccgacca taggaacggc ggagcttcga agctggtgac gagcttcgaa
     1561 gcctctgctg ctgatctcgt cacgctctcg agtcgtttta cggaggaaac atggcacaac
     1621 tatggttcag tcggtcgcgc tacgaactgc gacttgcctg cctggcagtg gcagcactga
     1681 ccctgctgcc gggggcaatg cgcgcgcaac agcccgtcac cctcaccggc aaagtcacca
     1741 gcgagcaggg cacaccgctc gcgtcagccg gcgtcatcat cgaacagctc ggtgccggcg
     1801 cggtgacccg ccctgacggc acttatacca tcctgattcc gggcgcccgc gttccgtcgg
     1861 gaccggttac ggtgacggca cgcctggtcg ggtacaaagc ccgttcggct caggtcgatc
     1921 tgagcagcgg ctcggccgcg caggatttca gtctggccga taaccccctg cagttgggtg
     1981 aactggtcgt gaccggcgcg ggaacggtca gtgaagtgga gaaactgggg accggcagga
     2041 gcgccattga ctccctctca atcgtcagaa gcgcggaacc caacgtcgtc aacgccctcg
     2101 ctgcaaaggc acctaacgtc accatcacgt cgagctcagg tgacccgggg gcctcggcca
     2161 gcatcctgat ccggggacag accaccatca gcgccggcag cggactcagc ggcgccgatg
     2221 cccagccgct gatcattgtg gacggggtgc ccatcgataa ctcgatcagc tacaacaatc
     2281 ccagtagcgg cgccatcaac tccagcgcgg ctccgtcaaa ccgggcaatc gacatcaacc
     2341 ccaacgacat cgaaaatgtc gaggtgctga agggtgcggc gtcgggcgcc atctacgggt
     2401 cccgtgccgg acagggcgtc atcatcatca ccacgaagaa
//
LOCUS       DASRPQ010000645         2187 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3216780, whole genome shotgun sequence.
ACCESSION   DASRPQ010000645 DASRPQ010000000
VERSION     DASRPQ010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2187
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3216780"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(161..1177)
                     /locus_tag="VFD73_07560"
     CDS             complement(161..1177)
                     /locus_tag="VFD73_07560"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HZI73874.1"
                     /translation="MTNGSVRVSVFGKTDLGRTRDHNEDTFLVADLSTGNASLQPEVR
                     NHEIGPRGSLFMVADGMGGAAAGELASAMAADHIYQHMANTWAKEKTSSPEQFAFRMK
                     EAVELANEQLYTYAREHPEVRGMGTTVTAAGVFGSDLYLAQIGDSRAYLIRGHQAIQL
                     TKDQSLMQRLVDAGELTEDEAEQSERRNIILQALGPDPRVKVDLTYQSIRRGDTLILC
                     SDGLSGLVRRDEFAELAGKYPDPQALCAALIDLANERGGPDNITVVTARFDGQALPEP
                     EGSRGVGYRNYQPPESPPPDTTTESPLPHSKPDSTLSLDRLRNLGLIAILLGVLMLLL
                     AVWR"
     gene            1292..>2187
                     /locus_tag="VFD73_07565"
     CDS             1292..>2187
                     /locus_tag="VFD73_07565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73875.1"
                     /translation="MQKQRSSRGALWLLLAAWACTPQSPPALSALRQLIVTSSPGRAT
                     SGKSGSSDPIALRVVYPAPEDRVRLRDSSFILGSVASKDVAVTINGTPVRVWPDGAWL
                     AWLAFPPDSVMSFKITARRGVDSANMVYTVRRDQRFLPAEVRSGGAWIDSMSLSPRGQ
                     AWIPAAEYLTLSARVAEGSSVRLHLPDGSMVPLTPQRQPEEVLPAVRAFEHDSTKLLT
                     PDEVRYVGVIRGRRLGPDPGPVLRELSTPLLHVLAMATWRCVSGARCPSPSGELLAPE
                     GGWATLEAALQGDTVRVRWPLQ"
BASE COUNT          374 a          675 c          712 g          426 t
ORIGIN      
        1 accaggctgg cgccgtgcac ccggagaaaa atggggacgg tctcgttgac cagaccgaag
       61 gggaagccgg acgcgaaggc gagcgccgcg atccagccga gtcgaactct gagaggggtg
      121 cttagagtgg gttcctgcgc cgcgggaatg accgccaact tcagcgccac accgcgagca
      181 gcagcatcag cacgccgagc agtatcgcga tgaggccgag gttgcggagc cgatccagag
      241 aaagggtgga gtcgggtttg gaatgcggaa gcggtgattc agtcgtggta tccggcggcg
      301 gactctcggg cggctggtag tttcgatatc ccacgcctcg ggaaccctcc ggttcgggga
      361 gggcctggcc atcgaagcgg gcggtgacca ccgtgatatt gtccgggcct ccccgttcgt
      421 ttgccaggtc gatcaaggca gcgcagagcg cttgggggtc cggatatttc ccggccagtt
      481 cggcaaactc gtcgcgccgt accagcccgg acaacccatc ggaacaaaga atcagggtgt
      541 cgccacggcg gatggactga tacgtcaggt ccactttgac ccgtgggtca ggccccagtg
      601 cctgtaggat gatgttgcgg cgctcgctct gctctgcttc gtcttcggtc agctctccgg
      661 cgtcgaccag ccgctgcata aggctctggt ccttggtcag ctgaatggct tggtgtcctc
      721 ttatgagata ggccctgctg tctccaatct gcgccaggta gagatcgctg ccaaacacac
      781 cggcggccgt gacggtggtg cccatcccgc gcacctccgg atgttctcgg gcgtaagtgt
      841 agagctgctc attcgccagc tccaccgcct ctttcatgcg aaaggcaaac tgctcgggcg
      901 aagatgtttt ctctttggcc caggtgttcg ccatgtgctg gtagatatga tctgcagcca
      961 ttgcgctggc gagctcaccg gccgctgcac cgcccatacc atcggcaacc atgaagagcg
     1021 agccccgggg gccgatctcg tgattgcgca cttcaggttg gaggctggcg ttgccggtgc
     1081 tgaggtcggc gacgaggaag gtgtcctcgt tgtgatcgcg ggtgcggccc aggtcggtct
     1141 tgccgaagac ggagactcgt accgagccgt tggtcattac caaaatcctt ccgtcggtcc
     1201 agggtctcga ggtctgacga atctagagag cgattttggg agcgtcaaca ttgtcttggc
     1261 gtaagttata gtggtcatgt accttgcagc tatgcaaaag cagcgatcga gtcggggggc
     1321 gctgtggctg ctgcttgccg catgggcctg cacccctcag tcgcctcctg cactttccgc
     1381 cctccgtcaa ctgatcgtca cttcgtcacc cggacgggcc acttccggca agagcggaag
     1441 ctccgatcca atagcactgc gcgtggtcta ccccgcgccg gaagatcggg tccggctgcg
     1501 cgattccagt ttcatcctcg gatccgtcgc aagcaaagac gtcgcggtca cgatcaacgg
     1561 aaccccggta cgggtgtggc ccgacggggc gtggctcgcc tggctggcgt ttcctccgga
     1621 tagcgtgatg tcgttcaaaa tcaccgcaag gcggggggtg gattcggcta acatggtcta
     1681 tacggttcgc cgagatcaac gattcttgcc cgccgaggtc cggtccgggg gagcctggat
     1741 cgactccatg tcgttgagcc cacgagggca ggcctggatc ccagccgctg aatatctgac
     1801 actctctgcc cgtgtcgcgg aaggttcctc cgtcagactg cacctgcccg acggctcgat
     1861 ggtgccactc acgccacagc ggcaaccaga agaggtcctg ccggcggtgc gcgccttcga
     1921 gcacgacagc acgaagctcc tcaccccgga cgaggtgaga tacgtcgggg tcattcgcgg
     1981 ccgccggctc ggtcccgatc ctgggccggt gctacgcgag ctctcgactc cgctgctcca
     2041 tgttctggcg atggccacct ggcgctgcgt cagtggggcg cgctgcccgt cgccatccgg
     2101 tgagctcctt gcgcccgagg gcggctgggc cacgctggaa gccgcattgc agggagacac
     2161 cgttcgagtc cgctggccac tacagat
//
LOCUS       DASRPQ010000646         2404 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4147657, whole genome shotgun sequence.
ACCESSION   DASRPQ010000646 DASRPQ010000000
VERSION     DASRPQ010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4147657"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..569)
                     /locus_tag="VFD73_07570"
     CDS             complement(93..569)
                     /locus_tag="VFD73_07570"
                     /inference="COORDINATES: protein motif:HMM:NF013252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73876.1"
                     /translation="MRATTRTPPQIQPIIPVHRPAPFNDADWLFEPKYDGFRGVLYCT
                     GHRSVLCSKRGNVMKRFQELASLLGNQLGCRAVLDGEIVALGDDGRINFWDLMRGRGT
                     LAYAAFDVLWLNGRDLRSLSLARRKRRLERLIPSSNGALNRVPSFSEEGRELFERR"
     gene            669..1040
                     /locus_tag="VFD73_07575"
     CDS             669..1040
                     /locus_tag="VFD73_07575"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI73877.1"
                     /translation="MARRILVVDDEPVLRMLISRAFRERGYEVVEAADGLAGLDVARS
                     ASVPFDLVVTNSHMPHMDGAHLAERLRELDPRLPIIHLSGSHSGRGSRTMPADVPTIL
                     KPFDIWDLVAEAETLIAQREA"
     gene            complement(1108..>2404)
                     /locus_tag="VFD73_07580"
     CDS             complement(1108..>2404)
                     /locus_tag="VFD73_07580"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HZI73878.1"
                     /translation="AKQLDGELGRIQAARGKGLVPPGFLLDKALAQLAISAKNAREGG
                     TLVDSIARRTETIPGNWADRARHIAVERIAPALARQIGELEAERKIATNDAGIWARPG
                     GDEFYRWALKASTTTALSPDEVHELGRSELERLHTRMDGILKEIGYSQGSVGDRMRTL
                     AKDSRYKFRQGDAGRAEILAFINQRLSWIRAQMPRAFNHLVNPNMEVRRLPPEEEPGA
                     PAAYGGAGSIDGKIPGRFWINLRTTDLHSRYSLGDLTYHEAIPGHIWQGEYTHQMPLI
                     RQILSFNAYSEGWALYAEQLADELGAYENDPVGRLGYLQSIAFRACRLVVDTGIHAKR
                     WSREQGVQFFVDVNGSNPLEVASEVDRYCSWPGQACGYKVGHSEINRQREKAVSTLGS
                     RYDIKAFDDAVVLGGNVPLDVLETNVDAYVGEAGKLRSG"
BASE COUNT          423 a          768 c          729 g          484 t
ORIGIN      
        1 gtcggacggg ccacgctggc gtacgatccc ggtctcagca ctccggatac gattgaatcg
       61 gcgattgtga aagcggggtt cgagcctctg acctagcgcc gttcgaagag ctcgcggcct
      121 tcctccgaaa agctgggcac ccgattcaat gcaccattag agctcgggat gagccgttcg
      181 agccgccgct tccgccgggc gagtgacagt gatcggaggt cacggccgtt gagccacagg
      241 acgtcaaacg cggcgtaggc cagcgttccg cgtccacgca tcaggtccca gaagttgata
      301 cgtccatcgt cgcccagtgc aacgatctct ccgtccagga ccgcccggca tccgagctgg
      361 ttccccagga gggaggccag ctcctggaac cgtttcatca cgttgcctcg cttggagcag
      421 agcaccgagc ggtgtccggt acagtagagg acgccgcgaa atccatcgta cttgggctcg
      481 aagagccagt cggcgtcatt gaaaggcgcc ggacggtgga ccgggataat tggttggatc
      541 tgtggtggtg tacgggtagt cgcacgcata tggctgaatc tatgcgtatg agacgatctg
      601 gcgcacgtca gaagttgaac ttaaggtaaa tacgtcggtt attgatcaat cgctgctgga
      661 gacgcgtcgt ggcgcgccgc attctggttg tcgacgatga gcccgtgctc cgaatgctga
      721 tttcacgagc attccgggag cggggctacg aagtcgtgga ggcagccgat ggcctggccg
      781 ggttggatgt ggcccggtct gcctcagttc cgttcgattt ggtggtaacc aacagtcaca
      841 tgccgcatat ggacggggcg cacttggccg aacggcttcg tgaactcgac cccaggctgc
      901 cgatcattca tctctccgga agccattccg gccgggggag ccgaacaatg ccggcggacg
      961 tccccacgat actgaagcca ttcgacattt gggatctggt ggccgaagca gaaaccctga
     1021 tagcccagcg agaggcttga gttggatgta gcgctccgct ttatcgcccg aatcgatcgc
     1081 tgctgacggt tgtggcggca acggaggcta cccacttcgc agctttcccg cttccccgac
     1141 atacgcgtcg acgttcgtct ccagcacatc cagtggcaca ttccccccca acaccacagc
     1201 atcgtcgaac gccttgatat cgtagcggga tccaagggtc gagaccgctt tctcccgctg
     1261 ccggttgatc tcgctgtgac ccaccttgta cccgcacgcc tgccctggcc acgagcaata
     1321 gcgatcgacc tcgctcgcca cctccagcgg atttgatccg ttcacatcca cgaagaactg
     1381 aactccttgt tcccggctcc agcgcttcgc gtggatgccc gtgtccacca ccaatcgaca
     1441 cgcccgaaag gcaatggact ggagatagcc gagtcttccg accggatcgt tttcatacgc
     1501 gcccagctca tcagccagct gctcggcgta gagggcccag ccctccgagt aggcattgaa
     1561 gctgaggatc tgccggatga gcggcatctg atgggtgtac tcgccttgcc agatatgccc
     1621 cgggatcgcc tcgtgatagg tgagatcgcc gagactgtat cggctgtgga ggtccgtggt
     1681 cctgagattg atccagaaac ggcccgggat cttgccgtcg atcgacccgg cgccgccgta
     1741 cgcggcgggt gctcccggct cttcttccgg cggcagccgt ctcacttcca tgttggggtt
     1801 caccagatgg ttgaacgcac gcggcatctg cgcacggatc cagctcagtc gctggttgat
     1861 gaaggccagg atctcggctc ggccggcgtc gccctggcga aacttgtagc gggaatcctt
     1921 cgccagcgtc ctcatccggt ccccgacgct gccctgcgaa tagccgatct ccttgaggat
     1981 cccgtccatc ctggtgtgca ggcgctcgag ctcgcttcgg cccaattcat gaacttcgtc
     2041 cggagataga gcggtcgtgg tcgatgcctt gagggcccag cggtaaaact cgtctccccc
     2101 gggacgggcc cagatccccg catcgttagt ggcgatcttt cgctcggctt cgagctcgcc
     2161 gatttgtcgc gcgagcgccg gggcaatccg ctccaccgcg atgtggcgcg cccggtcggc
     2221 ccagttgcct gggatcgttt cggttcgtcg cgctatcgag tccaccagcg tgccgccctc
     2281 gcgcgcattc tttgccgaga tcgccagctg agccagcgcc ttgtcgagca ggaacccagg
     2341 tggaaccagt cccttccccc gcgccgcctg tatccggcca agctccccgt cgagctgctt
     2401 cgcg
//
LOCUS       DASRPQ010000647         1362 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1014080, whole genome shotgun sequence.
ACCESSION   DASRPQ010000647 DASRPQ010000000
VERSION     DASRPQ010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1362
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1014080"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            82..756
                     /locus_tag="VFD73_07585"
     CDS             82..756
                     /locus_tag="VFD73_07585"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HZI73879.1"
                     /translation="MYFEYNISDYGGNLITRTPLRDEVYREIVELIHRGELQPGSRVK
                     DASLAAQLGVSRTPVREALIRLAREGILDADMGRGFSVCRLEAREMRETGAILGALES
                     LALQSCGDISPDQLTRLTQIDRELSSIRSDVDRSLALDEEWHRTLLAGCPNRRLLEII
                     SSLWQVPRRYMRAYLRDSRRVTLSTQHHARIIEALRRKDRQAAAERFSHHWDRGVEEL
                     GSWLER"
     gene            741..>1362
                     /locus_tag="VFD73_07590"
     CDS             741..>1362
                     /locus_tag="VFD73_07590"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HZI73880.1"
                     /translation="MAGTLSPESTADLLRWRADTPSCARLIHLNNAGAALVPRPVHET
                     VNRHLELEDTIGGYEAGEVARPAIVGSYQAVAEVIGAQARNIALVQSSTAAFAQAMSA
                     FDFKPGDLLLTSRSDYASNQIMYLSLAQRRGIEIVRAPDAPEGGIDADAVRSLVARRR
                     PSLVALTWIPTNSGLVQPAQAVGEVCAAAEVPYLVDACQAVGQMPID"
BASE COUNT          257 a          414 c          427 g          264 t
ORIGIN      
        1 tcgacctgga tgcccggctg gagtaagcgc tgataggcta agcagggggt cggttgctcg
       61 gcgtaatcag ccagttccta attgtatttt gaatacaata tatcggatta tggaggcaat
      121 ctgataactc gtactcccct ccgcgatgaa gtctaccgcg aaatagtgga actcattcac
      181 cgcggcgaac ttcagcctgg tagccgagtg aaggatgcct ccctcgcggc acagctgggg
      241 gtcagccgta ccccggtacg ggaggcgctt atccgtcttg cccgtgaagg gatcctcgac
      301 gccgacatgg ggcgaggctt cagcgtctgc cgactcgagg cccgggagat gagggaaacc
      361 ggcgcgattc tcggggccct cgaaagtctt gcactgcaga gctgcggaga catatctccc
      421 gaccagctga ctcgcctgac ccagatcgat cgcgaactct cgagtattcg cagcgatgtc
      481 gaccggagtc tcgcgctaga cgaagaatgg catcgcaccc tgctggctgg ctgtcccaat
      541 cgccggcttc tcgaaatcat ctccagcctc tggcaggtgc cacgcaggta tatgcgagcc
      601 tatctccgcg attcgcggcg ggtgacgttg tccacccagc atcatgctcg catcatcgag
      661 gcactccggc ggaaagaccg ccaggctgcg gccgagcgct tcagccatca ctgggatcgg
      721 ggtgttgagg agttagggtc gtggctggaa cgctgagtcc tgaatcaacc gccgacctcc
      781 tccgttggcg tgccgacact ccatcctgcg cccgactgat tcatctcaac aacgccggcg
      841 cggcgttggt cccccgcccg gtgcacgaga cggtgaatcg gcatctggag ctggaagaca
      901 cgattggagg ctacgaagcc ggcgaggtgg ctcggccagc gatcgtcggc tcctatcagg
      961 cagtggcgga ggtaatagga gcgcaggctc gcaacattgc gctggttcag agctcgacgg
     1021 ctgcctttgc tcaggctatg agcgcctttg acttcaagcc gggtgacctc ctcctcacta
     1081 gccgctcgga ttacgcctcg aaccagatca tgtatctctc cctggcccag cggcgcggga
     1141 tcgagatcgt acgagcgccc gatgcacccg agggagggat cgatgcggac gcggtgcgct
     1201 cattggtagc cagacgccgt ccctcattgg tcgccctgac ctggataccc acgaactcag
     1261 gactcgttca gccggcgcag gctgtgggag aagtttgtgc agccgcggag gtgccctatc
     1321 tggtggatgc ctgtcaggca gtcgggcaga tgccgatcga cg
//
LOCUS       DASRPQ010000648         1800 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2594137, whole genome shotgun sequence.
ACCESSION   DASRPQ010000648 DASRPQ010000000
VERSION     DASRPQ010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1800
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2594137"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..509)
                     /locus_tag="VFD73_07595"
     CDS             complement(<1..509)
                     /locus_tag="VFD73_07595"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HZI73881.1"
                     /translation="MSGSPITVLVADDHMIVRSGIRHVLEGEADFSVVGEAASAAEAL
                     ESVLQLGPDVVVLDISMPGMSGLEVTARLRSASPRTRVLILSMHDNAEYVLESVRAGA
                     HGYLLKDTAATELREAIRTVCRGQSYFSPPVASRLTAAVRGEQGVQPAVEQLTGRERE
                     VLLGITRGRT"
     gene            complement(506..>1800)
                     /locus_tag="VFD73_07600"
     CDS             complement(506..>1800)
                     /locus_tag="VFD73_07600"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="HZI73882.1"
                     /translation="TVLSAAFGLWGLHHLDYPFLRARGSWVPWGYYLDIMFALAVGAG
                     ILLLVFDDLRRGLAALSALSGDLQRAGREEDVLDALLARPLALSAVTGTALYTVHEGS
                     PRFLRGAGVCLSWQHSEPSRAAEEVLLGVIRSGRPQFTGNWSATTPDVAAYAYTAVLP
                     ILQSGVVAAILVLVGQARDPFTALDEKFLLALGHQVGAALENADLYSRLQSRTNELAR
                     LSSRMVQQHENERRRLSRELHDETAQVFSAVKMELGLLREKLRDDQAERLDQVLGMID
                     TGIRSIRNVTNDLRPSLLDDLGLLPALRSLAAEFAERSGIATTLDEPSTIPTLSAEAE
                     LALFRCLQEALTNVLRHAQATSVEVAIENRREGIVLRVTDNGRGLPADLERNGHMGLA
                     GMRERIASVGGTVRIGSPGRSVAGTTLEVLVPTHGAPA"
BASE COUNT          333 a          594 c          566 g          307 t
ORIGIN      
        1 gtgcggccgc gggtgatccc gagcagcact tcccgttccc ggccggtgag ctgctcgacg
       61 gccggctgga ctccctgctc tcctcggacc gccgccgtca acctgctggc caccgggggg
      121 ctgaagtatg actggccccg acacacggta cggatcgcct cgcgcagttc agtggcggcg
      181 gtgtccttca acaggtatcc gtgggctccg gcccgtacgc tctccagaac gtactcggcg
      241 ttgtcgtgca tactcaggat aagcacccgg gtcctcggcg aggctgagcg gagccgggca
      301 gtgacttcga ggccggacat cccgggcatg gagatatcga ggaccacgac gtccgggccg
      361 agctgcagaa ccgactcgag ggcctctgcg gcgctggccg cttcacccac gacgctgaag
      421 tcagcctcgc cttccaggac atggcggatg ccggagcgaa cgatcatgtg gtcgtcagcg
      481 accagaacgg tgatcggact gccactcatg cgggcgcacc atgagtaggg accagcacct
      541 ccagggttgt cccggcgacg gaccgacctg gcgagccgat tcgaacagtg ccccccacgc
      601 tcgcaatgcg ctcgcgcatg ccggcaagcc ccatatgtcc gttgcgctcg aggtccgcgg
      661 gcagtccccg tccattgtcg gtcacccgca aaacgatccc ctccctcctg ttttcgatcg
      721 caacctccac cgatgtcgcc tgggcatgcc ggagcacgtt ggtgagtgct tcctggagac
      781 agcggaacaa cgccagctcg gcttcggcag acagtgttgg aatggtgcta ggctcgtcca
      841 gtgtcgttgc gatcccgctt cgctcggcaa attcggctgc cagggaacgg agcgccggca
      901 gcagcccgag atcgtccagc aaggacggcc tgagatcgtt ggtgacgttg cggatactgc
      961 ggatgcctgt atcaatcatg ccgagcactt gatccagccg ttccgcctga tcgtctcgga
     1021 gcttctcccg gagaagaccc agctccatct tcactgcgga aaacacctgc gcggtctcat
     1081 cgtgcagctc ccgcgagagt cgccgccgct cgttctcgtg ctgctgcacc attcgggagg
     1141 agagacgggc gagctcgttg gttcggcttt gcagccggct gtagagatcg gcgttctcca
     1201 gggcagcgcc cacctggtgg cccagcgcga gcaggaactt ctcatccagt gccgtaaacg
     1261 ggtcacgtgc ctggccgacc agcaccagga tggcagcgac caccccgctc tgcagaatcg
     1321 ggagaactgc ggtgtacgcg taagcagcca cgtccggtgt ggttgctgac cagttgccgg
     1381 tgaattgcgg gcgaccagag cgaatcaccc ccagcaggac ctcctccgct gcgcgactcg
     1441 gttcactgtg ttgccacgac aggcaaacgc cggctccccg aagaaaccgg ggactgcctt
     1501 catgaactgt atacagggct gttccggtca cggccgagag ggcgagaggc ctcgccagca
     1561 aagcgtcaag aacatcttct tcccttccag cacgctgtaa gtcgccggac agggcggaaa
     1621 gggccgccag tccgcgacga aggtcatcga agacgagcaa cagaatgcca gcgccgaccg
     1681 ccagggcgaa catgatgtcg aggtagtagc cccagggcac ccaacttcct cgtgctcgaa
     1741 gaaacgggta gtccagatga tgcagtcccc agagtccgaa tgccgcgctg agcactgtcg
//
LOCUS       DASRPQ010000649         1148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1642100, whole genome shotgun sequence.
ACCESSION   DASRPQ010000649 DASRPQ010000000
VERSION     DASRPQ010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1642100"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1134)
                     /locus_tag="VFD73_07605"
     CDS             complement(<1..1134)
                     /locus_tag="VFD73_07605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73883.1"
                     /translation="MFRPGTVRAGDVKEALAGVVIFLVGALLVLMLVPGVLSTDIFSY
                     IWYGRILVDFGQNPLTHVPADYTFYDSGGWLQWVFWKETPSVYGPAWVLLAGAIAQIS
                     NALGGDIVNHILGHKVVAALSHLANVALIWKISGIVIGKYWRRPDLHALKLAEADWQA
                     GMRLAVTLAYAWNPLMVIEMGANGHNDVLMLTGVLLAVWLHLTGRWRLAVLTLAVAGL
                     IKAAVVVFLPGYLWLLFWEAAASKESAEGSRQEARRARGLLPSFARLAQAAAIFAGTW
                     VLFYIPFWEGPATLKPLVSGPAQEYFVNSLGETLRWKVPQVIADLAKALNGRPADFWS
                     MDAIGARLEWPARWGATAITGAVALTQTWRARTLPAMLVGWGWT"
BASE COUNT          219 a          399 c          342 g          188 t
ORIGIN      
        1 cgtccagccc cagcccacga gcatggccgg gagggtgcgg gccctccagg tctgtgtgag
       61 ggccaccgct cccgtgatcg ccgtggctcc ccagcgcgcc ggccactcga gcctcgcgcc
      121 gatagcgtcc atgctccaga agtcggcggg ccgcccgttc agggccttcg caagatccgc
      181 tatcacctgg ggcaccttcc atctcagcgt ttcgcccagg gagttcacga agtattcttg
      241 cgccggcccc gacaccagcg gcttgagggt ggccggacct tcccagaagg ggatatagaa
      301 taggacccat gtgccggcga agatcgctgc cgcttgcgcc agcctcgcga aagaaggtag
      361 taggccacgt gctctccttg cttcctgccg actgccttct gctgactcct tactcgcagc
      421 cgcctcccag aagaggagcc acaggtatcc aggtaggaaa acgaccacgg ccgctttgat
      481 cagtccagcg acggccaggg ttagaaccgc gagccgccac cggcccgtga ggtgcagcca
      541 cacagcgagc agcacgcccg tgagcatcag cacgtcgtta tggccgttgg ctcccatctc
      601 gatcaccatg agcgggttcc aggcgtaggc cagggtgacc gccaggcgca tcccggcctg
      661 ccagtcggcc tccgcgagct tcagcgcgtg caagtcgggc ctgcgccagt atttcccaat
      721 cacgatgccc gatatcttcc agatgagcgc cacattagcc aggtggctca aggccgcgac
      781 gactttgtgc cccagaatgt ggttcacgat gtcgccgccc agagcattgg agatttgcgc
      841 gatggccccc gccaggagca cccaggcagg tccatataca gaaggggttt ccttccaaaa
      901 gacccactgg agccaaccgc cgctatcgta gaaggtatag tcggcgggca cgtgcgtgag
      961 ggggttctgc ccgaagtcca ccaggatccg cccgtaccag atgtagctga atatatcggt
     1021 cgagagcacg ccgggcacga gcatcaacac gagcagcgcc ccaacgagga agatgaccac
     1081 cccggcgagc gcctccttca cgtcacccgc ccgcaccgtt cccggcctga acaccttgcg
     1141 caccgcgt
//
LOCUS       DASRPQ010000650         1284 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_390867, whole genome shotgun sequence.
ACCESSION   DASRPQ010000650 DASRPQ010000000
VERSION     DASRPQ010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1284
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390867"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(582..>1284)
                     /locus_tag="VFD73_07610"
     CDS             complement(582..>1284)
                     /locus_tag="VFD73_07610"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HZI73884.1"
                     /translation="LDVLPCSNLHMGHLHLFTALQLAGSPPALMSSSKRVLDLALAMP
                     LALLVAPLVALLALAVKISDPGPAFYRQSRVGHDGKPIPVLKLRTMYQDAEHRLQQVL
                     ASDAQKREQWERYFKLSHDPRILPGIGTLLRRTSLDELPQLWNVIRGDMSLVGPRPFP
                     KYHLEAFDPGFRALRASVPPGLTGLWQVSSRSEGDLETQRAQDGFYIRNRSLWLDVYI
                     LIATVPAVILGQGAK"
BASE COUNT          248 a          384 c          422 g          230 t
ORIGIN      
        1 gatctcggcc gattaggaag acaaggcgat cgcttcgagg aagttttttg cctggagcag
       61 gatctgcttg agccgaagcg tatccggact cgacgaggta ttggcgccct cggcctttga
      121 aaaggggcgc cgatacgcat atcagcccat atctccccat ctgtcggacc ggagctcacc
      181 cacccgctcg cgtagatccg agggaatagg ttcgagccgt cgatgccggc ctccaatcca
      241 gaacgcgcct ggctcgcggt cagctcaatg gcaaccttgc ccatcattca cgtcgacgat
      301 gccagctcgt aaaggagccg gcttaagacc cacccgttgt ctgtcttggc cacgcgcgcg
      361 gcctgttcgg cagtggcggc cggattggca gccacttatc acccttgaga atgaaccgta
      421 ccgtccctgc tccagtcatg gatgaagggt tcggcgctca cctttctcct cgaggtgcag
      481 cctccggtga ggatgccacg gcggccttgc aagtgccctc agcaggaccc caaaagggga
      541 cgagcgctgc gatcgccgac cgtcggctcc tgcggcccaa cctatttcgc gccctgcccg
      601 aggatgacgg cggggacggt tgcaatgaga atgtacacgt ccagccagag cgaccgattg
      661 cggatataga atccatcctg cgcgcgctgg gtttcaagat caccctcgct gcgcgaggat
      721 acctgccaca gcccggtcag gcctggtgga acgctggccc tgagggcacg gaacccgggg
      781 tcgaaagcct cgagatggta cttggggaag ggacgtggtc cgacgaggct catgtccccg
      841 cgtatgacgt tccacagctg gggcagctca tccaggctgg ttctgcgcag aagggtcccg
      901 atccccggca aaatgcgcgg gtcgtgggaa agcttgaaat agcgctccca ttgctcgcgc
      961 ttctgtgcgt cgctggccaa cacctgttga agccggtgct cggcatcctg gtacatggtg
     1021 cggagcttga ggacggggat gggcttgccg tcgtggccga cacgcgactg ccggtagaat
     1081 gccgggcccg ggtcgctgat tttgacggcc agggcgagaa gagccaccag cggcgcgacg
     1141 aggagcgcca gtggcattgc gagcgcaaga tcgagaaccc gtttggaaga gctcatcagg
     1201 gcgggcggcg atccggcgag ctgcaaggcg gtgaaaaggt gcagatggcc catatgcagg
     1261 tttgagcagg gaagcacatc gagg
//
LOCUS       DASRPQ010000651         1185 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3521876, whole genome shotgun sequence.
ACCESSION   DASRPQ010000651 DASRPQ010000000
VERSION     DASRPQ010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3521876"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..204
                     /locus_tag="VFD73_07615"
     CDS             <1..204
                     /locus_tag="VFD73_07615"
                     /inference="COORDINATES: protein motif:HMM:NF013586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016805 - dipeptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HZI73885.1"
                     /translation="GTEVMPTTAFDNFTGSADSADTTGQALRYRKILVQAMESEGFTP
                     YGQAWWHFNYPLQGATPLDQVIR"
     gene            223..>1185
                     /locus_tag="VFD73_07620"
     CDS             223..>1185
                     /locus_tag="VFD73_07620"
                     /inference="COORDINATES: protein motif:HMM:NF040455.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HZI73886.1"
                     /translation="MVITRRRITALVGPALLLWPCVIVLLGPSACRQSGNRVSQEIQN
                     IVSADKPPAYLEGARWKLVRQIYQDRQYQPLWVGVRPVPERTKQLIASLCDAEREGLR
                     PADYRLPELRRTLERLRQSLEKQRPEAFAVVDLELTRRFLDYGADLLAGRLDPKAVSS
                     EWYIRERRSNIDGTLRGAAQGQDFNGMMAPLRPDLPEYAELVKALAVYRDILRQGGWP
                     AISGHSALRLGNRGRRVAVLRQRLRITGDLVGSAGSKPIYNRAVAKAVARFQARHGIP
                     SNGIVGPATLAALNVPVQVRIRQIQLNLERYRWLPAEFGPRYIYV"
BASE COUNT          209 a          377 c          390 g          209 t
ORIGIN      
        1 ggaaccgagg tcatgcctac cactgcattc gataatttca ccggctctgc tgacagcgcg
       61 gacaccacgg gccaggcgct gcgctaccgg aagatcctgg tgcaggccat ggaatccgag
      121 gggttcaccc cctacgggca ggcgtggtgg catttcaact atccgctcca aggtgccaca
      181 ccgctggatc aggtgattcg gtaactgctt gagcgttgcg cgatggtaat cacccgccga
      241 aggatcaccg ccctcgttgg acccgctctg ctgctgtggc cgtgcgtcat cgtgctgctg
      301 ggtccttccg cgtgccgcca gtccggcaac cgggtcagtc aggaaattca gaatatcgtc
      361 tcggcggaca aacctcccgc atacttggag ggcgcccgct ggaagttggt gagacagatc
      421 taccaggatc ggcaatatca gccgctctgg gtgggagttc gcccggtgcc ggagaggacc
      481 aagcagttga ttgcgagcct gtgcgacgcc gagcgggaag gacttcgccc tgcggattat
      541 cgtctgcccg agctccgccg cactctggag cggctgcgtc agagcctgga gaagcagaga
      601 ccggaagcct tcgccgtggt cgatctcgag ctgacgcgac gcttcctcga ttacggcgcg
      661 gatttgctgg cgggccgact cgatcccaag gcggtctcga gcgagtggta cattcgcgag
      721 cgccgctcca acatcgacgg cacgctgcgg ggcgctgccc aggggcaaga cttcaacggc
      781 atgatggccc ccctccgccc cgatctgccg gagtacgccg agctggtgaa agcgctggcc
      841 gtctaccgtg acatacttcg gcagggcggc tggcctgcga tatcggggca tagcgcgctc
      901 cggctgggga accggggcag acgcgtagcg gtgctgcgcc agcgactcag gatcacgggc
      961 gacctggtcg gttcggcggg aagcaaaccg atctataacc gggccgtggc caaagccgtc
     1021 gcacgtttcc aggcgcggca cgggatccca agcaacggga ttgtgggccc cgcgacactg
     1081 gccgctctca acgtgccggt ccaggtacgg attcgtcaga tccagctgaa cctggagcgc
     1141 taccgctggc ttcctgcgga gttcggcccc cgctacatct acgtg
//
LOCUS       DASRPQ010000652         2277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_75136, whole genome shotgun sequence.
ACCESSION   DASRPQ010000652 DASRPQ010000000
VERSION     DASRPQ010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75136"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..778
                     /locus_tag="VFD73_07625"
     CDS             <1..778
                     /locus_tag="VFD73_07625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73887.1"
                     /translation="DSIYMDSLASQNQIKVEKNAASIMRSAAEKPDQARHSDKKITTF
                     KGGGLTVAEFMRWIQALPPQYLTQLRQADDTMLTQFAKVLTQNVLLLRQADSAKIRIT
                     PAEWTELANNYKGQVDTLRREMGLDTTALWDATVPAADRDKVAAVKVDQYFDRLVSGK
                     SRLRPLPATMASILRDHSTFEVHEAGLNRAVELAQAERAKTDSTKAKGPLQPAPGPAP
                     IPGVGPPQTGAPGQGPPASQPPAGRPGTAPAESTAPKPGR"
     gene            782..2182
                     /locus_tag="VFD73_07630"
     CDS             782..2182
                     /locus_tag="VFD73_07630"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HZI73888.1"
                     /translation="MAKGSIRRLTLAAGLLVGVSAHPLPAQDSAAVADSAAPPPDTTT
                     SQVAAAPPQDTTFVVDRVVAVVGNRPVLASQVDEELFSRQSQGVKIPTDSQGLGQVRQ
                     QIVSSIIDEELLVQQAQRDTSIKVTDEEIASGVEEQVRKVRSNFTSEVEYAAELKKAG
                     FQTPEEYRRWLTDQQRRAAYQNRLIEKLRNDGKLKPVAPTEKEMKEFFEEQKSTMGNR
                     PATISFRQIVISPVASPAAKAKTKAQADSIVLELRRGADFATAARRFSQDPGSKDQGG
                     SLNWFRRGVMVPEFERVAFSLKPGVVSDPVESPFGYHIIQVERVQPGEVQARHILLVP
                     EIDSAHVRQARALADSVRNALVAGAPFDSLQRLYHDRSAERQGENVPVNKLPENYAKA
                     IGQAGAGTTLPVFTMPTAGGREQFVILQVTDRRPEGEIKYDDVRDRIRDQLGQQLAIR
                     RYIDGLRRSTYVDIRS"
BASE COUNT          457 a          736 c          720 g          364 t
ORIGIN      
        1 ggactcgatt tatatggaca gtctggccag ccagaatcag atcaaagtcg agaagaatgc
       61 agcgagcatc atgcgctcgg cggccgaaaa gccggatcag gcgcgccact cggacaagaa
      121 gatcacgacg ttcaagggtg gagggctcac cgtcgcggag ttcatgcgtt ggatccaggc
      181 cttgccgccc caatacctca cccagcttcg gcaagccgac gacaccatgc tgacccagtt
      241 cgccaaggtc ctgactcaga acgtgctgct gctgcgtcag gcggactcgg ccaagatccg
      301 gatcaccccg gccgaatgga ccgagctcgc caacaattac aagggtcagg tggatacgct
      361 gcggcgagag atgggtctcg acaccaccgc cctgtgggac gccactgtgc cggctgcgga
      421 ccgcgacaag gttgctgccg tcaaggtgga tcagtatttc gatcggctgg tctccggtaa
      481 gtcgcgcctc cgtcctctgc ccgccaccat ggccagcatc ctgcgggatc attctacctt
      541 tgaggtgcac gaggcaggtc tcaatcgcgc cgtagaactg gcgcaggccg agcgggccaa
      601 gaccgattca acgaaggcca aagggccgct ccagccggct cccggacccg ctccgatacc
      661 cggcgttgga ccgccgcaaa caggcgctcc gggccagggc ccaccggcgt ctcagccgcc
      721 cgcgggccgc ccgggaacag cgccggcgga gagtacggca ccaaagcctg gacgatagac
      781 gatggctaag ggaagcatcc gccggctgac gctggcggca ggattattgg tcggagtctc
      841 ggcgcatcca ctgccggcgc aggacagtgc cgccgtcgct gacagcgcag cgcccccgcc
      901 ggacaccacg acctctcagg tcgccgccgc gccgccgcag gacaccacct ttgtggtcga
      961 ccgcgtcgtg gccgtggtgg gcaaccgccc agtactcgcg tcgcaggttg acgaggagct
     1021 gttttcgcgg cagtcgcagg gcgtcaaaat tcctactgat tcgcagggac tcggccaggt
     1081 gcgacagcag attgtctcct ccattatcga cgaggagctg ctggtgcagc aggcgcagcg
     1141 ggacacttcg atcaaagtga cagacgaaga aatagcgagt ggggtcgagg aacaggtccg
     1201 taaagttcgc agcaatttta catctgaagt cgagtacgcg gcggagctca agaaggccgg
     1261 attccaaacc ccggaagagt accggcgttg gctgaccgac caacagcggc gtgccgccta
     1321 tcagaaccgg ttgatcgaga agctgcgaaa tgacggcaag ctgaaaccgg tcgcccccac
     1381 cgaaaaggag atgaaagagt tcttcgagga gcagaaatcc acgatgggca atcgcccggc
     1441 caccatttca ttccggcaga tcgtgatctc cccggtggct tcgcctgccg ccaaggccaa
     1501 gaccaaggcc caggccgact cgatcgttct cgagcttcgc cggggggccg acttcgccac
     1561 tgctgcccgg cggttttcac aggaccccgg ctccaaggac cagggcgggt cgctgaactg
     1621 gtttcggcgg ggcgtcatgg tgcccgagtt cgagcgggtg gccttttcct tgaagccggg
     1681 tgtggtctcc gatcccgtgg agtctccctt cgggtatcac atcattcaag tcgagcgggt
     1741 gcagccgggc gaggtgcagg cccgacacat tctgctggtg ccggagattg actctgccca
     1801 cgtccgacaa gcacgagcgc tggctgattc ggtgcgaaac gcgctggtag ccggggcgcc
     1861 gttcgattcg ctccaacgcc tctatcacga ccgctccgcc gaacgtcagg gagagaacgt
     1921 ccctgtcaac aagctcccgg agaactatgc caaggcgatc ggccaggccg gcgccggaac
     1981 gacgctgccg gtctttacca tgcccacggc aggcggtcgc gagcagttcg tcattctcca
     2041 ggtgaccgac cgacgacccg agggcgagat caagtacgac gatgtacggg accgcatccg
     2101 agaccagctt gggcaacagc tcgccatccg gcggtacatc gacggattgc gccggtcgac
     2161 ctacgtcgac atcaggtcgt aagcacacca agcagcgtcc caggattgcc gtcaccctcg
     2221 gcgatccccg cggcatcggg cctgagatca ccgccgccgc actggatcag ccggtcg
//
LOCUS       DASRPQ010000653         1838 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4464172, whole genome shotgun sequence.
ACCESSION   DASRPQ010000653 DASRPQ010000000
VERSION     DASRPQ010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1838
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4464172"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1260
                     /locus_tag="VFD73_07635"
     CDS             <1..1260
                     /locus_tag="VFD73_07635"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI73889.1"
                     /translation="DPAEKKSINERPTTNTDAYDFYLRGIEYDSRGPAREDVHNSVEM
                     FRRATELDSNFAQAWARFSIGRSGEYWFFYDRSEAALSEAKAAADRALRLRPDLPEPH
                     VALGYYYYWAKLDYDRALKEFALAQERQPNNGDLFLAIASVDRRQGRWAQAVVDFQKT
                     AQLSPRSIDAVGNLSQTYSLVRKYDLACAIADRAIGIGPDVAFPRWLKLQCLMGEDSL
                     PQARAAAREALKAVGLVQMVGEAPGVGAIGSFAVVPSFLLLEDSAYQPKVEQLTVADL
                     PDTLGLYRLKADMYRIQGRVKLEQAYLDSARAVLEPKVKTHPDEANFRALLGLVYARL
                     GRKTEAVREGQTAVKLLPVSREAYRGANMQTALALIYATVGMRPKALEQLKYLLSIPC
                     DISRGLLRHDPRWAGLRDDPKFQELIR"
     gene            1264..1686
                     /locus_tag="VFD73_07640"
     CDS             1264..1686
                     /locus_tag="VFD73_07640"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005488 - binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HZI73890.1"
                     /translation="MIIQQTVDIAAPPQRVWDVMIDVERWPEWTSSVSSVELLDRGPL
                     RVGSRARVRQPRLAAAVWTVTTIEPGRYFEWRSVLPGLTSIGGHRVEAQGSDRSRVRL
                     SVEWKGMLAPLINLIYGDLSRRYVDTEAEGLKRRAEGR"
BASE COUNT          346 a          553 c          618 g          321 t
ORIGIN      
        1 gatcccgcgg aaaagaagtc gatcaacgag cgcccgacga cgaacaccga cgcgtatgac
       61 ttttatctcc gcgggatcga gtacgacagc cggggccctg cccgggagga cgttcacaat
      121 tcggtggaga tgtttcgccg agccactgaa ctggattcca acttcgcgca ggcgtgggca
      181 aggttctcga ttggacggtc cggcgagtac tggttcttct atgatcgcag cgaggccgcg
      241 ctgtcggagg ccaaggccgc cgccgaccgg gcgctccggc tccgtcccga cctgccggag
      301 cctcatgtcg ccttgggcta ctactactac tgggccaagc tggactacga ccgggcactc
      361 aaggagttcg cgctggccca ggagcgacag ccgaacaacg gagacctgtt ccttgcgatt
      421 gcatcagtcg accgtcggca gggacgctgg gctcaagcag tggtagactt ccagaagacg
      481 gcgcagttga gcccgcgatc catcgatgcg gtcggcaacc tgtcacagac ctactccctc
      541 gttcgcaaat acgacctggc ctgtgcgata gctgataggg cgatcggcat cggtcccgac
      601 gtcgccttcc cgcgctggct gaagctccag tgcctcatgg gagaggacag cttgccgcag
      661 gccagggcag cggctcgtga agcactgaag gcggtggggt tggtgcagat ggttggggag
      721 gcacccgggg tgggcgcgat cggcagcttt gccgtggtgc ccagcttcct cctcctcgag
      781 gattccgcct atcagcccaa ggtcgaacag ctgacagtcg cggacttgcc cgacactctt
      841 ggtttatacc gtctcaaggc ggacatgtac cggatccagg gtcgagtcaa gctggaacag
      901 gcgtacctgg actcggcccg cgccgtgctg gaaccaaagg tgaagactca cccggacgag
      961 gcgaacttcc gcgcactact cggcttggtg tatgcccggt tgggacgcaa gaccgaagcg
     1021 gtgcgggaag gtcagaccgc ggtgaagctg ctgccggtaa gccgcgaggc gtaccgcggt
     1081 gccaacatgc agacggcgct tgcgctgatc tacgccacgg ttggcatgcg acccaaggca
     1141 ctcgagcagt tgaagtacct cttgtccatt ccatgcgaca tcagccgggg gctcctgcgg
     1201 cacgacccgc gctgggcggg gttgcgagat gacccgaagt tccaggaact gatccggtag
     1261 gcaatgatca tccaacagac agtggacatc gccgcgccgc cacagcgggt ctgggatgtg
     1321 atgatcgatg tggagcgctg gcccgagtgg accagctccg tgagcagcgt cgagctcctg
     1381 gatagaggtc cattgagggt cgggagccga gcgcgcgtcc ggcagcctcg gctcgccgcc
     1441 gcggtgtgga ccgtcaccac catcgagccg ggacgctact tcgagtggcg cagtgtgctg
     1501 ccgggtctca ccagcatcgg cggccaccgc gtcgaggctc aggggagtga ccgctccagg
     1561 gttcgcctct cggtggagtg gaagggtatg ctggctccgc tcatcaatct gatctacggg
     1621 gacctgtccc gccgctacgt cgataccgaa gcggaagggt tgaagcgaag agcggaggga
     1681 aggtgagaga gcggaaagag cggaagaggc ggtaggtgcg gaactgcgga aggagcgcag
     1741 tgcggaagtg ttcggctatg cgttcttccg cctgttccgc tcgttccgct ccttccgcct
     1801 aatatgtcac gtcgaacccg atcagcttga acaccacc
//
LOCUS       DASRPQ010000654         1092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2595212, whole genome shotgun sequence.
ACCESSION   DASRPQ010000654 DASRPQ010000000
VERSION     DASRPQ010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2595212"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(892..>1092)
                     /locus_tag="VFD73_07645"
     CDS             complement(892..>1092)
                     /locus_tag="VFD73_07645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73891.1"
                     /translation="ACNSTSSGSGGSYGTVFFENVPSFGCPPGHFQLYSFHWQNGGLN
                     YPGAGNGQPWYLNTTTPDCVQQ"
BASE COUNT          195 a          345 c          360 g          192 t
ORIGIN      
        1 ccgtcgaatg gcaccccgat catgtcgata cccctgccgg ctgtgttccc ggcgaccgcg
       61 ggattcccca tcgcgtgctc ctaaccatcg cgtcgcccgg acgagagccg acccagatac
      121 ccaggctccc cgcagtttcg ccgcctgacc gcggcaagag tgagatcgga gcctagctgc
      181 tctaaaacag cacagtaatg ctggtgaatc gaatgtaagg tctgtcagct gcagcaggag
      241 gccgtcccag gcgcgcagtg atcctcataa ggggcattct gaggggcaga ataacgctag
      301 tggcagctcg ccggggccgc tggcagctcg cgtgagctgc tgttatggct ggtcacgccg
      361 catatggcct ggtcgggcaa tgcctgaggg gttcatggca cgcaagaggt ccggagttcg
      421 ctcgagggca ccttcggcga agtgccggcc gggtggcttc gttcgtgaac tctgggatcc
      481 cggacctcgc aagcaaacca cgagctggca ctgtgaggcc gccttagccc tgctggaggc
      541 ccgcggcgct gtctactgcg gggatgagca gggcggggct gccctgcgtg ctgagagtga
      601 cggtcggcta cgcctacgtc cgcctgcgcg gccctgacca cggccacttc tacgccggct
      661 cctacggcga ggcgggacct gaaatggcgg gcctgccgcg tcacagaatg ggccattgcg
      721 ggccgcgacg tctacgccta attcaacaaa cgacggcgag gccaacgcca tccgcaacgt
      781 gtgggcactg aataccctct tcgcccagga aaacggccgg tcggcgcgga tggcggctac
      841 ctgccatccg cgccgaccgg ctgctgcgtc accgcgtaag cgggtgcgtg atcactgctg
      901 cacgcaatct ggcgtggtgg tatttagata ccatggctgg ccatttcccg cccctgggta
      961 attaagcccg ccgttctgcc agtggaacga gtagagctgg aagtgcccgg gagggcagcc
     1021 gaaagacggg acgttctcga agaatacagt cccgtatgaa ccgccgcttc ctgagctggt
     1081 gctgttgcag gc
//
LOCUS       DASRPQ010000655         1069 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3522442, whole genome shotgun sequence.
ACCESSION   DASRPQ010000655 DASRPQ010000000
VERSION     DASRPQ010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3522442"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..573
                     /locus_tag="VFD73_07650"
     CDS             133..573
                     /locus_tag="VFD73_07650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HZI73892.1"
                     /translation="MTAPDITTRWRSWAPYLLSVLRIMAAFLFMQFGAAKLFGFPAPI
                     MPGGTTAPAGSLVWFAAVLETFGGLLLFVGLFTRPVAFLLSGEMAVAYFKGHAPQGFW
                     PLLNQGHPAVLFCFLYLYLSAAGAGPWSLDWWRDRARAGVRGVR"
     gene            586..>1069
                     /locus_tag="VFD73_07655"
     CDS             586..>1069
                     /locus_tag="VFD73_07655"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HZI73893.1"
                     /translation="MVYLLAIGSAILYGAADFTGGLTTRRAGTILVVLLSQFSGLALV
                     VLLLSLLPSAAVHQSDVMWGGIAGLVGGVGVALLYRALSIGVMAVVAPTTAVCAVTIP
                     VVYSVFRGERPAPLAVLGIILGIASIVLVSQQRTVADTEHGLVAERGRLPLGVGTALL
                     S"
BASE COUNT          142 a          345 c          343 g          239 t
ORIGIN      
        1 cacgctcgat ccgatcgaca tctggctcgc gatccttgcg ggccacgcca cccgctgtgc
       61 gctaagcgtc attcggttcc gacagggcaa gtggcgcacg attgccgtcg acatcgacca
      121 ggcccggaga gcatgaccgc accagacatc accacccggt ggcgctcctg ggcgccgtat
      181 ctcctgagcg tcctccggat catggctgcg tttctgttca tgcagttcgg agccgccaag
      241 ctgttcggct ttcccgcgcc tatcatgcca ggggggacaa ctgctccggc tggatcgctg
      301 gtctggttcg ccgccgtctt ggagaccttc ggcgggcttc tcctgttcgt cggactgttc
      361 acccgcccgg tggcgtttct gctctcggga gaaatggcgg tcgcgtactt caaaggacac
      421 gctccccagg gtttctggcc gttgctgaat cagggccacc ccgccgtgct gttctgcttt
      481 ctctacctct atctctccgc tgccggcgcg ggcccctgga gcctggactg gtggagagat
      541 cgcgctcgag cgggcgtgag gggcgttcgg tagcagagga tcgcgatggt ctacctgctt
      601 gcgatcggct ccgcaatcct ctacggggcg gcagatttca ccggcggtct gaccacccgg
      661 cgcgccggaa ccattctggt ggtcctgctc tcccaattca gcggccttgc actcgtcgtc
      721 ttgttgctat cgctcctccc ttccgccgcg gtccatcagt ccgatgttat gtggggcgga
      781 atcgccggtc tggttggcgg agtgggtgtt gcgttgctgt atcgcgcact cagcatcgga
      841 gtgatggcgg tggtggcccc gaccaccgcg gtttgtgcgg tcaccatacc ggtggtgtat
      901 tcggtgtttc gaggagaacg gccggcccca cttgccgtcc tcgggatcat tctcggaata
      961 gcatccatcg tcctggtgag ccagcagcgg acggtggctg atacagagca tggtcttgtg
     1021 gccgaacgag ggcggctccc gcttggggtc ggcaccgcgc tgctctccg
//
LOCUS       DASRPQ010000656         1649 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1015540, whole genome shotgun sequence.
ACCESSION   DASRPQ010000656 DASRPQ010000000
VERSION     DASRPQ010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1015540"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(130..336)
                     /locus_tag="VFD73_07660"
     CDS             complement(130..336)
                     /locus_tag="VFD73_07660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73894.1"
                     /translation="MVSRKPHRAELGEQAVQMVFELRTETGNARGSIARVGHRPGINT
                     ETLRNWVNNARGRFRAAARHHDGG"
     gene            complement(673..>1649)
                     /locus_tag="VFD73_07665"
     CDS             complement(673..>1649)
                     /locus_tag="VFD73_07665"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI73895.1"
                     /translation="NGINTVHLSYVREKTGHALIGARQWIPREHLADPVKSLLMGLPV
                     DLEFRTKGQLAIDICADAYADGIRFDFACGDEVYGSCTQLRESFEDDNQAYVLRVPSN
                     FTLTLAAGTKLTCAEAVSRLLRHQRRWEIRSAGSGSKGERWYAWAWLATASPRHHLLI
                     RRHLKTGDLAFHYCWVPEGQILTKARLIRAAGLRWPVEEDFEFSKVCFGLDQCQARLY
                     TAIARHVVLVMAALAICAITAALVKDRTDTQAPPPVRPDQRPPPEPGMIPLTIPEIKR
                     LLAALTIRPLPRWLVIHWDAWTRRHQARARWFHKRARLARNAELSLVS"
BASE COUNT          276 a          516 c          560 g          297 t
ORIGIN      
        1 ctccgacata cagtagacct aacctaaact gtctatctga ttaccggccc gccccggaac
       61 tgaaccttaa gaatttcgtt ggcgcgacgc agctcacgta ccttgcgttc cagctcggcg
      121 atccgcttct tatcctccgt cgtgatgccg ggccgctgcc cggaatcgac ctcgggcatt
      181 attcacccag ttgcggagag tctcggtgtt gatgccggga cgatggccca ctcgggcgat
      241 cgagccacgc gcgtttcctg tctccgtccg cagctcgaag accatttgca ctgcctgttc
      301 ccccagctca gcgcgatgcg gttttctgga taccatgaac cccgaccttc ccagaggtca
      361 cagcctcaaa ggaacccggg gcagtccacg gtgtcctacc tcagctggcc ggttttgatc
      421 tcaccacggg tacccatttg cctcaccgac gagacaatcg tgacgtctcc gcaagccgct
      481 gtagaacgag gacacagacg ggcagtcaac cccaatgtcg gctactgacc gcgtgtgggc
      541 ccctaccgat gaagggattc ggcatggcca ttcgacgcaa gacctggagg aacgtgaccg
      601 gcgaccgcta cctatggcct tatggggtcg ggggcgcgct gatagccgcc ctagtaaggc
      661 agccgcattt cgctagctga ccagggagag ctcggcgtta cgggcgagtc tggcgcgttt
      721 gtggaaccat cgtgcccggg cctggtggcg gcgagtccag gcgtcccagt gaatgacaag
      781 ccagcgaggc aggggccgga tggtgagcgc ggcgagcagc cgcttgatct ccgggatggt
      841 cagcgggatc atcccgggtt ccggcggtgg gcgctggtcg ggccggaccg ggggcggtgc
      901 ctgggtgtcg gtgcggtcct tgaccagggc ggcggtgatg gcgcagatgg ccagggcggc
      961 catcaccagc acgacgtggc gggcgatcgc ggtgtagagc cgggcttggc actggtcgag
     1021 cccgaagcag accttgctga attcgaaatc ttcttctact ggccatctga gcccggcggc
     1081 acggatcagc cgggccttgg tcaggatctg cccctcgggc acccagcagt agtgaaaggc
     1141 caggtccccg gtcttcaggt ggcggcggat gagcaggtga tggcgcgggc tggcggtggc
     1201 gagccaggcc caggcatacc agcgctcgcc tttggagccg ctgcccgcgg agcggatctc
     1261 ccagcgccgc tggtgcctca gcagccggct gacggcctcc gcgcaggtca gcttggtgcc
     1321 tgcggccagg gtgagggtga agttcgacgg cacgcgcagc acgtacgcct ggttgtcgtc
     1381 ctcgaaggac tcgcgcagct gggtgcagct gccgtagacc tcgtccccgc aggcgaagtc
     1441 gaaccggatg ccgtcggcgt acgcatccgc gcagatgtcg atggccagct ggcccttggt
     1501 acggaactca aggtccactg gcaggcccat gagcagggac ttcactggat cggcgaggtg
     1561 ctcgcgaggg atccactggc gggcgccgat cagcgcgtgc ccggtcttct cacgcacgta
     1621 agacaggtgg acggtgttga tgccgttgg
//
LOCUS       DASRPQ010000657         3830 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3218280, whole genome shotgun sequence.
ACCESSION   DASRPQ010000657 DASRPQ010000000
VERSION     DASRPQ010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3830
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3218280"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1817)
                     /locus_tag="VFD73_07670"
     CDS             complement(<1..1817)
                     /locus_tag="VFD73_07670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73896.1"
                     /translation="MLARRERLPKPHDTIDVKLRCHRLSNRSAWAWRALIAVSLLGAP
                     RSTLGAQIWNSPTALTLVRRAVERRLAVQADSSLTSYRARAHGFVFFLAQVGQGLNEA
                     PRLVKADELDVEVYWQAPNRSKQVILGWRDGKYLPTDISYHRDHLGIVTNNFGNTIRI
                     GDGDEVRDVPHPLSPQGLTAYDYALSDSASIRSASGQVTVYQIRVRPKSFSQPLVVGT
                     VYLDVASAELVRFRFSFTPVAYLDRQLEDISVLLDNALYQNRYWLPYRQEVEIRRRST
                     WLDFPARGIIRGRWEIEDYDLNAAIPESTFAYPPIGGLRRPGGNTRWPESLDQAIAGV
                     AQPVNRQDMEQLRAEVERIAGDHTLAGLPSSRLAGGSLSDLARVNRVDGLTLGVGGVF
                     GVQRSTIQFRPTLAYGTSDHRLLGSASVNWQRGNTAVTLGGSRRVTDFTDVPIVSPLL
                     NSLSAQEGGNDYGDYVLLHSVDLTGRRRFGARTWFSVGVGLEESHSVSVRASPASGTY
                     RDNPALGAGSHRILRIGLLRTGGGIARHNDFDGRISFEGGAGSSEYLRMTAESRWRIP
                     LGGSELVSETRLGLGSDQLPAYRSFVLGGRGTLVGEPFRA"
     gene            1841..2380
                     /locus_tag="VFD73_07675"
     CDS             1841..2380
                     /locus_tag="VFD73_07675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73897.1"
                     /translation="MAAACSTRRAPAAPETATPQASRILPLARVIVLETAGPQPSDTS
                     VTIVTGTSTTIVLRHGPPENIEFARLDFPPNAFGDSGQTVTVDVKPRPGIYGLDLGIS
                     LPLRGRATLAFSYPRYFSAPTRARQLYRSDAAYERALAIGRVLPENQIELLSSTRPTP
                     DNLTAQISTPGSYLVAAPQ"
     gene            2377..>3830
                     /locus_tag="VFD73_07680"
     CDS             2377..>3830
                     /locus_tag="VFD73_07680"
                     /inference="COORDINATES: protein motif:HMM:NF012640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HZI73898.1"
                     /translation="MTASFELFRSRASSGGMVPVTRQVVLDGETPVTAFAKLHRGRYG
                     FLLESLEGGERWARYTFLATDPREVYRYRGRECSRWAADTGWQLVKSDIAPLDHLAET
                     MRRHPPVEVPGLPRFTGGAVGYLGYDIVRTIEALPHAPTDDRDLPDAMLMLVDTLLVL
                     DNLFNRATVIANVEVPTGADEPELRRLFDAAEARIQSWLERLAHPVNFSALEIDPLPE
                     LGEHSSPYADVRFQEDVLRIKEYISEGDTFQTVLSRRLDLPASDPLLTYRYLRALNPA
                     PYLYFLHCDEIHIIGSSPEILVRVEDDEVTVRPIAGTRRRGATPAEDADLAEELLADP
                     KERAEHLMLVDLGRNDVGRVAEFGSVRLTSFMAVERYSHVMHLVSEVKGSLRRDLDAL
                     AALGACFPAGTVSGAPKVRAMEIIDELEPVRRGPYAGAVGYVGWGARTLDTAIAIRTC
                     VMRGNRAWVQAGAGIVADSNPVNEWHETEAKARAV"
BASE COUNT          702 a         1228 c         1220 g          680 t
ORIGIN      
        1 gcgcggaacg gctcgccgac cagggttccc cgccccccca aaacgaagct ccggtaggct
       61 gggagctggt cgcttccgag tcccagtctg gtctcgctga ccagctcgct tccgcccaga
      121 ggtatgcgcc agcgactctc ggcggtcatt cgcaggtact cactcgaccc agcaccgccc
      181 tcgaaagaga tgcgcccgtc aaagtcattg tgccgggcaa tgccaccccc agtccgcaac
      241 aaccctatcc gcagaattcg atggctgccg gcaccaagtg ccggattgtc ccgatacgtt
      301 ccgctggccg gagatgcccg gacgctaacc gagtgacttt cctccaagcc gacgccaacg
      361 gaaaaccatg tccgtgcccc gaagcgtcgc cgcccggtca gatctacgga atgcagcagc
      421 acatagtccc cgtagtcgtt gccgccctcc tgagccgata gcgagttcag cagcggagaa
      481 acgatcggga catcggtgaa atcggtgacc cgacgcgagc ctcccagggt gacggcggtg
      541 tttccccgct gccagttcac gctggccgag cccaacagcc ggtgatcgga ggtgccgtag
      601 gcgagtgtcg gacgaaactg gatggtgctt cgctgtactc cgaaaacgcc gcccacgcca
      661 agcgtaaggc catcgacccg gttgacccgg gcaagatcac tcagcgatcc gccggccagt
      721 cgactcgagg ggaggccggc gagcgtgtgg tcacccgcga tccgctcgac ttcagcccga
      781 agctgttcca tgtcctggcg attgaccggc tgggccacac cggcaatggc ctgatcgagc
      841 gattcgggcc accgggtgtt cccgccgggc cgccgcagtc ccccgatggg aggataggca
      901 aaggtggatt ccggaatggc agcattgagg tcgtagtcct cgatctccca gcggccccgg
      961 atgattccgc gagccggaaa gtcgagccag gtggagcgtc gtcgaatttc gacttcctgc
     1021 cgatagggaa gccagtatcg attctgatac aacgcattgt ccagcaaaac actgatgtct
     1081 tccagctgcc gatccaggta ggccacaggg gtgaagctga atcgaaaccg caccagctcc
     1141 gccgaggcca catcgagata gacggtgccg accacgaggg gctgggagaa ggatttcgga
     1201 cggacccgga tctgatacac ggtgacctgt ccggaggcgc tgcggatcga ggccgaatcg
     1261 ctcagggcgt agtcgtaggc ggtcaggccc tggggtgaca gcggatgggg tacgtcgcgg
     1321 acctcgtccc cgtcgccgat ccgtatggtg tttccgaaat tgttggtgac gatgccgagg
     1381 tgatcgcgat ggtaactgat gtcggtcggg agatacttcc catcgcgcca gccaagaatg
     1441 acctgcttgc tgcggttagg ggcctgccaa tacacttcca cgtcgagttc gtcggctttg
     1501 actagtctgg gcgcctcgtt caggccctgt cccacctgcg ccaggaaaaa cacgaatcca
     1561 tgggcccgcg cgcggtagct ggtgagggac gaatcggctt gcaccgccag tcgccgttca
     1621 accgctcggc gaaccagcgt gagcgcagtc ggactgttcc agatctgcgc ccccagtgtt
     1681 gatcgaggcg cgccgagcaa gctcacggcg atcagcgcgc gccacgccca tgcggatcgg
     1741 ttggacagcc gatggcagcg tagcttcacg tcgatcgtgt catggggctt cggcagccgc
     1801 tcgcgccgcg cgagcatcgc tatgggcgac ctttctgatc gtggcggcgg cgtgtagcac
     1861 ccggcgggcg ccggcggcgc cggagacggc aacaccccag gcatcccgga ttctaccact
     1921 ggcccgagtg atcgtgctgg aaacggccgg tccgcagcca tccgacacct cagtcaccat
     1981 tgtgaccgga acctccacga cgattgtgct ccgccacgga ccacccgaaa atatcgagtt
     2041 cgccaggctg gactttcctc ccaatgcatt tggtgacagt ggccagaccg tcaccgtgga
     2101 cgtgaagccg cggccaggca tctatggtct cgacctcggc attagtctgc cacttcgcgg
     2161 tcgggcaacg ctggccttca gctacccccg atatttctcc gccccgacgc gcgcgcgcca
     2221 gctataccgc agcgatgcgg cgtacgaacg cgccctggcc atcggccgag tactgccgga
     2281 aaaccagatt gaactgctca gctcgaccag acctaccccg gacaatctca cggcacagat
     2341 aagcactcca ggaagttacc tggtggcagc accgcaatga cggcgagctt cgagctgttc
     2401 agaagccggg cgtcatccgg cggaatggta ccggtcactc gtcaggtggt cctcgacggg
     2461 gaaactccgg tgaccgcctt tgcgaagctg catcgcggac gctacggctt cctgctcgag
     2521 tcgctggagg gtggcgagcg ctgggcccgc tacacctttc tggccaccga ccctcgggag
     2581 gtttaccgct atcgtgggcg cgagtgctcc cgctgggcag cggacacagg ctggcaactg
     2641 gtgaaatcgg atatcgctcc gctggatcac ctcgcggaga ccatgcgccg acatcctccg
     2701 gtagaagtgc cgggtcttcc ccgctttacc ggtggcgcag tcgggtatct gggatacgac
     2761 attgtgcgaa cgatcgaggc gctgccacat gcgccgacgg acgatcgcga cctgcctgac
     2821 gccatgctca tgctggtgga cacgttgctc gtgctggaca accttttcaa tcgcgcgaca
     2881 gtgattgcga acgttgaggt gccgaccgga gccgacgaac ccgagctgcg gcggctcttc
     2941 gatgcggcag aagccagaat ccagagctgg ctcgagcggc tggcgcatcc ggtgaacttt
     3001 tcggcattgg agatcgaccc actcccagag ctcggtgagc actcgagtcc ctatgcggat
     3061 gttcgctttc aggaggatgt gctccgcatc aaggagtaca tcagcgaggg cgacaccttc
     3121 cagacggtcc tttctcgccg gctggacctg ccggcgtccg atccgctgct gacctatcgc
     3181 tatcttcgcg ccctgaatcc ggcgccgtat ttgtacttcc tgcattgcga cgagatccac
     3241 atcatcggca gctcacccga gattctggtc cgggtggagg atgacgaggt gacggtccgg
     3301 cccattgcag gaacccggcg gcggggagcg acgccggccg aggacgccga tctggcggag
     3361 gagcttctag ccgatccgaa ggaacgagcc gagcacctga tgctggtgga tctcggccgc
     3421 aacgatgtgg gacgggtggc tgaattcggg tctgttcgcc tcacctcctt catggcggtc
     3481 gagcgttact cacacgtgat gcacctggtc agcgaggtca agggaagcct tcgacgggac
     3541 ctcgatgccc tggctgcttt gggggcctgc tttccggcag gcaccgtttc cggtgcaccg
     3601 aaggtccggg ccatggagat tatcgacgag ctggagccgg tgcgacgggg accgtacgcc
     3661 ggcgccgttg gctacgtggg ctggggcgca cgaaccctcg ataccgccat tgccattcgc
     3721 acctgtgtca tgaggggtaa ccgcgcgtgg gtccaggccg gcgctggcat cgtcgccgat
     3781 tccaacccgg tgaatgagtg gcacgaaacc gaggccaagg cccgggcggt
//
LOCUS       DASRPQ010000658         2382 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_392134, whole genome shotgun sequence.
ACCESSION   DASRPQ010000658 DASRPQ010000000
VERSION     DASRPQ010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2382
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_392134"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..702
                     /locus_tag="VFD73_07685"
     CDS             <1..702
                     /locus_tag="VFD73_07685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73899.1"
                     /translation="HLRHFGGRASDYVDLAAGLAPLRGLALTGTARIGKIVAAPAILA
                     DSEQDVRDFQAALGWTRSRLGFEVSYSRTSAFSPFGYADFPQVPLLAPAPKTEWITAS
                     VRLAPLQWITLETWYSDPRGITPDGLPPTLSMSAATLRSKFLRQFPSGIFDLKLRLSM
                     ESWGRGVIGRDLTGNPIELKGATFFRTLLQIQLDRFSIYWDRVNLTSTKLTYVPGFRI
                     PGLGSDFGVRWEFWN"
     gene            complement(1165..>2382)
                     /locus_tag="VFD73_07690"
     CDS             complement(1165..>2382)
                     /locus_tag="VFD73_07690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73900.1"
                     /translation="ADGQPLWSKPATVNGWVHDIVQHPAGIIMLPEAAPEGEQTGSRS
                     VVNGVVQTGLNVARYEDGSNIASKPIKIRGNVTDALIAGDAAVLAVDAESKTFVNVLD
                     VANATLRLKKDVKIKGQLDYAELTPAGLLYVSRPDAGINAEVNVIDLDKGEPRFKDAI
                     ESGKPMSSNNYDADRYALHHVTEGQTMYVFANRDRQLYAVSRDDGTFKALGGEIKLQG
                     SEDPVDMEIRPEGIVLIAPQNLVVVARDGQVKQQAYFPAPQLPGLLRALHAINAVRAG
                     LYGAAASAYGDAFAQASRRASDPQVQRITGQLAAAYTQGGAQLQGYARQSAALATKRF
                     KASLAVPGSVFMLTKAPEGKGNVLLQVDKASAQPRTRIDLGKEKEPVYAVDDIAGMLF
                     LRTAPGTLAGYKL"
BASE COUNT          411 a          746 c          722 g          503 t
ORIGIN      
        1 cacctcaggc attttggcgg acgggccagc gattacgtgg acctcgctgc cggactcgca
       61 ccgttgcggg gactcgccct caccggcaca gcccggatcg gaaagatcgt cgccgcgcca
      121 gcgattttgg ccgattccga acaggatgtc cgtgacttcc aggcggcctt aggatggacc
      181 cgttcccggc tgggtttcga ggtctcctac tcccgaacgt ctgccttcag tcccttcggc
      241 tatgccgatt tccctcaggt ccctctgctt gctccggcac cgaaaacgga atggattacg
      301 gcatcggtgc ggctggcgcc gctgcagtgg atcaccttgg agacttggta cagcgacccg
      361 cggggaatta cacctgacgg ccttccgccg acgctgtcga tgagtgccgc cacgctccgc
      421 tccaagttcc tccgtcagtt tcccagcggc atcttcgacc tgaagctccg gctcagtatg
      481 gagagctggg gcaggggagt catcgggcgc gacctgaccg gcaatccgat cgagctcaag
      541 ggcgccacgt ttttccgaac cttgctccag attcagctcg accgcttttc gatctattgg
      601 gaccgggtga acctgacctc caccaagctg acctacgtgc cggggtttcg gatccctgga
      661 ttagggagtg atttcggggt gaggtgggag ttctggaact agacgcgact cgcgactctc
      721 cactggcgac tctcctcgtg acttctatca cggttcccta gctccgagaa cgtaccttca
      781 ggaggtaccg cgatactgtg gtacctgcgc agaggaggta tgaacatgtt tggcttcgga
      841 agcaatcgcc gtcaggtgag aaacgacacc ttcagcccca gccggttgcg caatgcagct
      901 ctcgcagggg ttgggatgtt ggcatggcgc tggtggcgga atcggcaatc ctctaaccag
      961 ccgcagaatt atcaggacag aactttttcc gacactcaga cccgttccgc cggctcgctg
     1021 tagacccagc ccgtggggca cgcagctgag agaccgtcac ttcagagtgc ttgaggtgac
     1081 ggtctcaagt tcttatcagc agccatgtag cagcttcgag ctaaactggt ttgtagcaca
     1141 ctcgccgctt caggtcgggc gagtttagag cttgtacccc gccagtgtcc ccggggcggt
     1201 tcgcaggaag agcatccccg caatgtcgtc cacggcgtac acgggctcct tctccttacc
     1261 cagatcgatg cgcgttctcg gctgagcact ggccttgtcc acttgcagca gaacgttgcc
     1321 ttttccttct ggtgcttttg tcagcatgaa gacggaccca ggaacggcga gcgaggcctt
     1381 gaaccgcttg gtggccagtg cggctgattg acgagcatag ccctgaagct gggcgccacc
     1441 ctgcgtgtac gcggcggcga gctggccggt gatccgttgc acctgcggat ccgaggcgcg
     1501 gcgagatgcc tgggcaaagg catcaccgta cgcagatgcg gccgcgccat acaatccggc
     1561 gcgcacggcg ttgatggcgt gcagcgcgcg gagaagcccg ggaagttgtg gagcagggaa
     1621 gtacgcctgc tgcttcacct gaccgtcgcg ggcgaccacc acgagattct gcggcgcaat
     1681 gagcacaatc ccttcgggcc gtatctccat gtcgaccgga tcttcactgc cctgcagctt
     1741 gatctctccg cccagcgcct tgaaagtgcc gtcgtcccgg cttacggcgt agagctgccg
     1801 gtcgcgattg gcaaacacgt acatcgtctg tccttcggtg acatggtgca gcgcgtagcg
     1861 gtcggcatca tagttgttcg agctcatcgg cttgccgctc tcgatcgcgt ccttgaaccg
     1921 gggctcgccc ttgtccagat cgatgacgtt gacctcggcg ttgattccgg cgtccggccg
     1981 agagacatac aacagtcccg ccggagtgag ctcggcgtag tcgagctgac ccttgatctt
     2041 cacatccttt ttgaggcgga gggttgcgtt cgccacgtcc aggacattca cgaaggtctt
     2101 ggactcggcg tcgactgcga gcaccgccgc atcgcctgca atcagcgcgt cggtgacgtt
     2161 gccccgtatc ttgatcggct tggaggcgat gttggaacca tcttcgtagc gggccacatt
     2221 gaggccagtt tgcaccaccc cgttcaccac gctgcgactg ccggtctgct caccttctgg
     2281 cgccgcttcc ggcagcatga tgatgcccgc cggatgttgc acgatgtcgt ggacccagcc
     2341 attcacggtg gccggcttgg accagagcgg ctgtccatcc gc
//
LOCUS       DASRPQ010000659         1724 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3841131, whole genome shotgun sequence.
ACCESSION   DASRPQ010000659 DASRPQ010000000
VERSION     DASRPQ010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3841131"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            103..1386
                     /locus_tag="VFD73_07695"
     CDS             103..1386
                     /locus_tag="VFD73_07695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HZI73901.1"
                     /translation="MGRSELERLSREELIELVLRLQRPEKTSRTSSKPPSTDRKQQRE
                     RSKPGGAKPGHEGHSRVISEAPDAVVEHRPGQCSGCGAALAVDLPAETVSVHEQVELP
                     AVKPLVTHHRRLAVCCSACGTRVLAPGPEAARRTPFGPRLHAIATYLKTFQALSYGRL
                     QGALSDLFGLHLSQGGLMNLLRRAQGCFAGGRTHAIAALRRAEMVASDETGVRIKGSN
                     AYHWVFRSSEAVVHHAAQTRAASVVRDMMDGHQPAVWMSDRYAAQQGHGAAHQTCLAH
                     LARDVAYAVEASDDPVPWRLQIWLQSVFALAGRVTSLAASTRVAKRRTLDRHLTSILA
                     TASSCDVTRALQAKIGRARDQLLTFLDHPGLVEVTNNACERALRPAVVQRKVTNGYRA
                     MWAAEGEAAIRTVVDTAQLTPGTSPFSTILKTLGL"
     gene            complement(1535..>1724)
                     /locus_tag="VFD73_07700"
     CDS             complement(1535..>1724)
                     /locus_tag="VFD73_07700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032489531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI73902.1"
                     /translation="YLPPYSPDFNPIEQAFAKLKDLLRTEAARTIPDLWDAIRRALTR
                     FRPTECRNYLAAAGYDAS"
BASE COUNT          301 a          561 c          563 g          299 t
ORIGIN      
        1 aaaggcggta ccgtcaactt gctgctgtgt cggcctgctt aagccgggtg cgtaattacc
       61 cacgcccttg cggcggctcg cttccgctga ttccgttgcg cgatgggccg cagcgagctt
      121 gagcgtctga gtcgggagga actgatcgaa ctggtgctgc gtctgcagcg tccggagaag
      181 acctcgcgca cctcgtcgaa gccgccctca acagatcgca agcagcagcg cgagcgctcg
      241 aagcccggcg gggccaaacc cgggcacgag ggccacagcc gggtgataag cgaggcgccc
      301 gatgcggtcg tggagcaccg tccgggccaa tgctccggct gcggagcggc gctggctgtg
      361 gacctgccgg ccgagacggt cagcgtgcac gagcaagtcg agctacctgc ggtgaagccc
      421 ctcgtcacgc atcatcgacg ccttgcggtc tgctgttcgg cctgcgggac gcgcgttctg
      481 gctccagggc cagaggcggc gcggcgcacg ccgttcgggc cgcggctgca tgccatcgcg
      541 acttacctca agacctttca agccctgtcc tacgggcggt tgcagggtgc gttgtccgac
      601 ctgttcgggc tgcatctcag ccaaggcggc ctgatgaacc tgctgcggcg tgcgcaggga
      661 tgcttcgcgg gtggtcggac gcacgccatc gcagccttgc ggcgagcgga gatggtggcc
      721 tcggacgaga ctggtgtcag gattaaaggc agcaacgcct accattgggt gttccgctct
      781 tccgaggccg tggtgcatca cgccgcgcag acccgcgccg cctcggtggt ccgggacatg
      841 atggacgggc accagcccgc cgtatggatg tcagatcgct acgcggctca gcagggccac
      901 ggcgccgctc atcagacttg cctggcccat ctcgcccggg acgtcgctta cgccgtcgag
      961 gccagcgacg atccagtgcc ctggcggctc cagatctggc tgcaatcggt ctttgccttg
     1021 gccggacggg tcaccagcct ggcggcctcg acacgggtgg ccaagcgcag gaccctggac
     1081 cggcacctaa ccagcatcct cgccaccgcg agttcctgcg acgtgacccg ggcactccag
     1141 gccaagatcg gccgtgcccg cgatcaactc ctgaccttcc tcgaccatcc cggtctagtc
     1201 gaggtgacca acaatgcttg cgagcgcgcc ctgcgcccgg ccgttgtcca gcgcaaagtg
     1261 accaacggct atcgggcgat gtgggccgct gagggcgagg cggcgatccg caccgtcgtt
     1321 gacaccgcac agctcacccc aggaacctcc cccttcagca ccatcctgaa aaccttgggc
     1381 ctctgaacag cgtcaccacc gaaagcacgc gtgggtaatt acgggtagga gcctatctca
     1441 cgatgaattc agctggtagc cttaagcaga agcgccaatc caacgctccg aagtttggat
     1501 ttcagaccca acagatgctt agagcggcat ccgatcaact tgcatcgtat cctgcggcag
     1561 cgagatagtt gcggcattca gttggtcgaa agcgggtcag cgcccgtctg atggcgtccc
     1621 agagatcagg gattgtgcgg gcggcctcgg tgcgcagcaa atccttcagc ttggcgaagg
     1681 cctgttcaat tggattgaag tccgggctgt aaggcgggag gtag
//
LOCUS       DASRPQ010000660         2397 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3218738, whole genome shotgun sequence.
ACCESSION   DASRPQ010000660 DASRPQ010000000
VERSION     DASRPQ010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2397
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3218738"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..442)
                     /locus_tag="VFD73_07705"
     CDS             complement(<1..442)
                     /locus_tag="VFD73_07705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73903.1"
                     /translation="MPSHLREHVPNLRKHVPGDLRKHVRYLQSDPVRRLPDRASRVSA
                     PNGQAEYLPAALPGAVTVTGSLSGESLDPRPHVWRPLLTGPQLRQARSVAIDVAERLA
                     DRRIVRDAVASAAARTQFPRALHWAPYGVAQGEAGLAILHGYLDS"
     gene            580..915
                     /locus_tag="VFD73_07710"
     CDS             580..915
                     /locus_tag="VFD73_07710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73904.1"
                     /translation="MTVERVNAGEVERIRAPPPQPGRRDTLPGGAARADPQIQVELVQ
                     RMPLARDDEVDPCSAPDRDPARLETPHRGLLRRDGLPVNQVLVPEFGIPVQVAGEIEP
                     PPARAITVT"
BASE COUNT          470 a          771 c          738 g          418 t
ORIGIN      
        1 agctgtcaag gtaaccatgc aggatcgcca ggcccgcctc accctgcgcc acgccgtaag
       61 gggcccagtg cagggcacgc ggaaactggg tacgggcagc ggcagacgcg accgcatccc
      121 gcacgatacg acgatccgca agccgttcgg ccacgtcaat ggccactgac cgtgcctgcc
      181 gcaactgcgg cccggtcaga agcggccgcc agacatgcgg tcgcgggtcc agcgattccc
      241 cagacaacga cccagtaacg gtcacggcac ctggcaatgc ggcgggcagg tattcggcct
      301 gcccgttggg tgctgacacc cgggaggctc ggtcgggcaa cctccgcact gggtccgatt
      361 gcaggtatcg cacgtgtttg cgcaggtcgc cgggcacgtg tttgcgcagg ttgggcacgt
      421 gttcgcgcag gtggcttggc acgtggcttc gccgcaggtc tcgcaggtcc cacacggggt
      481 ggccagacat gttgcctgac cgcacgttac gcaagtccgg tcaccctgtg tcggacagtc
      541 gaagcaggtg acgcaagtac ggcccgcaac agtgtccagt tgacagtcga gcgtgtcaac
      601 gcaggcgaag tcgagcgaat ccgggcacca cccccacagc cgggtcggcg ggataccctg
      661 cccggcggcg ccgcgagagc cgatccgcag atccaggtcg aactcgtcca gcggatgccc
      721 ctggcgcgag acgatgaagt cgatccgtgc tccgcgcctg accgcgaccc ggctcgactc
      781 gaaaccccgc atcggggcct gctccgccgg gatggcctcc cggtaaacca ggtcctcgtc
      841 ccggaattcg gcataccggt tcaggtcgcg ggagagatag agccgccgcc agcccgggcg
      901 atcactgtca cctagcaggc cggagagaac aaccacccgc tgaggcggcc cctccgggtt
      961 aggccgcatc cgccggacgt agtcatcgac gtgggcagca ccggactctg actcggcgcc
     1021 gggatcgctc gtaccctccg cctggtcgtc agcagaaccg ttctcggcat ctgacattac
     1081 aatcccctca cgccaatccc tacatgcaca gccgtgtcat catctattgc ctcagcgggc
     1141 ctcgtcccgc tgaagtgatc ttgttaagaa tgtgaagacg gctgtcggcg cgctccagca
     1201 cagtaaagaa accttaatcc cactccaatt catcagtcaa gatagcgtgg ccaatcggca
     1261 cccgaccaga cgcttgcgcg gctcccctga tccaaaatgt ggatagctgc gacaattcga
     1321 gctcactggc acgccagtgg ggcagtcggt aagccgcgag gccttcggtg cctgagatca
     1381 agtcgaaatg acttatgggc atgccgtcat cctgaagcag gcgatcgcga tcgcggcggt
     1441 cgcatcggca agctctgcgt caacctgcgg cgtcagcttc cggtaacgca atccgccgcg
     1501 ggaggaggcg cgatcagcgc atcccagcgc ccgcgacacc cgtaaacgaa tccatctgcc
     1561 caggccccag ggaccggcaa agtcgttcat gcggtgagcg tgagaacttc catcgttccg
     1621 cctgggcctg cctgccgtgg cagacacgcc ggacacatca ccggctgctc tgaaacagca
     1681 gctcacagcc tcatttcacg actttgctgt atccctggcg gttgctcgcg ctctccaatg
     1741 ctgctagcca gggctgaggc gacggaagcg gcgcttctgt ccggcagcac accggagaac
     1801 tggttgcagg cgagctggcg cgacctgtac aaggcgaagg gccgaaccgt tctggcgccg
     1861 ttttggatgc aggcaggcct cgcgagtagc catagccgcg gtgatatcgc aggcgtcctt
     1921 cgcagccttc gtagttgcgg gtcggcatac cgcaggtatc gtgctgactt ggccgaagcc
     1981 gtcaacattg gcgaccaaga tgagctgtcc aaactggtga atgcgctagc tggcgacctc
     2041 gagtctttga cgaaaatgcc aatcaagccg caggagcagc gttggacata gctacagcca
     2101 ctctcaaaat tactgcaccg gtaatgccgg cagaacttat taaagccggt gctcgagcgg
     2161 cagcaggagg gcaaacggga tggctaagca agctgggagt ccggctattt agaccacgtc
     2221 tctggttcct gctcaacctc acctcgaagg cgaatcatgg tactgaggta gttcgccatg
     2281 cggcacggct gttcggtttt gccgggaagg atgcgaccca gccagttgag tttctagccc
     2341 gtgtcggaca gacgtccagg gtcgcattag ttcatatcgc atcacgctgc tgtttag
//
LOCUS       DASRPQ010000661         1007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4465521, whole genome shotgun sequence.
ACCESSION   DASRPQ010000661 DASRPQ010000000
VERSION     DASRPQ010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4465521"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..592)
                     /locus_tag="VFD73_07715"
     CDS             complement(<1..592)
                     /locus_tag="VFD73_07715"
                     /inference="COORDINATES: protein motif:HMM:NF012361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HZI73905.1"
                     /translation="MAYPQWPDVSPNQLELEQLERWKEERLFQQTQEATAQGEPYVFY
                     EGPPTANGRPGIHHVFSRTIKDLICRFHSMQGQSVTRIAGWDTHGLPVEIEVEKELQL
                     SGKKDIERFGVEQFNARARKSVFKYQAEWENLSDRIGYWLDYEHPYITCSNQYIESVW
                     WLLHRLHERDLLYRGHRVLPYCPRCGTVLSSHELALG"
     gene            complement(592..>1007)
                     /locus_tag="VFD73_07720"
     CDS             complement(592..>1007)
                     /locus_tag="VFD73_07720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HZI73906.1"
                     /translation="GDNPLIGPNDEQLGPRFPDMSSAYDPELRALTRSAARDLGIVLR
                     EGVYAAVPGPNLETRAEYRMLRTLGADVVGMSTVPEVIVAVHAGMRCLGLSIITDQCL
                     PDALEPADISRILATAHGAEPSLTRLIGTVVERLS"
BASE COUNT          179 a          330 c          322 g          176 t
ORIGIN      
        1 agccgagggc cagctcatga ctcgagagca ccgtgccgca gcgcgggcag tatggcagca
       61 cccggtgccc tcgatagagc aggtcgcgct catgcagccg gtgcagcagc caccagacac
      121 tctcgatgta ctggttgctg caggtgatgt agggatgctc gtagtcgagc cagtagccga
      181 tacggtcgga gagattctcc cactcggcct ggtacttgaa cacgctcttg cgggcccggg
      241 cgttgaactg ctcgaccccg aaccgctcga tgtccttctt gccgctgagc tggagctcct
      301 tttccacctc gatctcgacc ggaagaccgt gggtatccca accggcgatc cgggtgaccg
      361 attgcccctg catcgagtga aagcggcaga tcaggtcttt gatggtccgg gagaacacgt
      421 gatgaatccc gggccggccg tttgccgtgg gcgggccctc gtagaacacg tacggctccc
      481 cctgcgccgt cgcctcctgg gtctgctgaa acagacgttc ctccttccag cgctcgagct
      541 gctcgagctc gagctggttg ggagaaacat ccggccactg aggataggcc atcaggagag
      601 acgctccacc acagtgccga tgagccgggt cagagacggt tcggctccat gcgcggtcgc
      661 gaggatgcgg ctgatgtcgg caggctccag ggcatccggc agacactggt cggtgatgat
      721 cgagagcccc agacagcgca tgccggcgtg cacggcgacg atgacttccg gcaccgtcga
      781 cattcccact acatcggccc ccagtgtgcg aagcatgcgg tactccgccc gcgtctccag
      841 gtttggcccc ggcacggcgg cgtacacacc ctcgcgcaag acaatgccca gatcgcgagc
      901 cgcgctccgg gtcagcgcgc gaagctccgg atcgtaggcc gaggacatgt ccggaaatcg
      961 aggtcccagc tgctcgtcgt tcggcccgat cagcgggttg tcgccca
//
LOCUS       DASRPQ010000662         1942 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1644133, whole genome shotgun sequence.
ACCESSION   DASRPQ010000662 DASRPQ010000000
VERSION     DASRPQ010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1942
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1644133"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..406)
                     /locus_tag="VFD73_07725"
     CDS             complement(<1..406)
                     /locus_tag="VFD73_07725"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HZI73907.1"
                     /translation="MLGRPIRVLVADDHMIVRTGIRHVLEGQAEFEVVGEAASGEEAL
                     ELTPQLKPDVVLLDISMPGPSGLQVTERLRAISPGTRVLILSMYDNAEYVLQSVRAGA
                     HGYLLKDTAATELRDAVRTVCRGESYFSPPVAT"
     gene            complement(406..>1942)
                     /locus_tag="VFD73_07730"
     CDS             complement(406..>1942)
                     /locus_tag="VFD73_07730"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="HZI73908.1"
                     /translation="ATGWTALALLYAALVFSQQIRWHRWYLGLVLFPPIWSYLAIYRL
                     KHFLWAAGPAVLFLSLATLWTGWVFLQYRRKVPSSGATLLSIAFGLWGLHHLDYPFLR
                     ARGSWAPWGYYLDILFALAVGAGILLLVFDDLRRGLAALSALSGDLQRAGDEEDVLEV
                     LLSRPLALPAVTGTALYSADSGTVRFLRGAGVCASWKDGTLGASALSTLAGVVHSGRP
                     QFTRDWSPVGGGHTEYGYAAALPILRNADVAAVLVLVGEARDPFTALDDKFLLALGHQ
                     VGAALENADLYTRLESRSTELARLSARMVQQNEAERRRLSRELHDETAQVFSAVKMEL
                     SILRESIDRQQAERLDQVLSLIDTGIQSIRNVTNDLRPSLLDDLGLLPALRSLVADFA
                     ARSGITTSLDEPDRLPPLSPEAELALFRSLQEALSNIMRHANASSVEVAIMNTETSVV
                     LRVRDNGRGMAQVTSIDRNGHMGLAGMRERITALGGSVAIGAGEEGGVILEVALPTPG
                     RGP"
BASE COUNT          402 a          627 c          608 g          305 t
ORIGIN      
        1 tcgtcgccac tggcgggctg aagtaggact cgccccggca cacggtgcgt actgcatcgc
       61 gaagctcggt cgcggccgtg tctttcagga gatagccgtg ggcaccggcg cgcacgctct
      121 gcagcacata ctcggcattg tcgtacatgc tcaagatcag caccctagtg ccgggggata
      181 ttgctctgag gcgctcggtg acctgaaggc cggaaggccc gggcatcgag atatccagca
      241 ggactacatc aggcttcagc tgcggagtga gctccagcgc ctcttcgccg ctggccgcct
      301 cacccacgac ctcgaactcc gcttggccct cgaggacatg gcgaattccg gttcgcacga
      361 tcatgtggtc atccgccacg agcacgcgga ttggtcggcc cagcatcagg gcccccgccc
      421 cggtgtcggc agggccacct ccagtatgac accgccctcc tcgccagccc cgatcgctac
      481 cgagcctccc agggcagtaa tccgctcacg catcccggcc agtcccatgt ggccatttcg
      541 gtcgatgcta gtgacctgag ccatcccgcg gccattgtct ctgactcgca gaacgacact
      601 cgtctcggtg ttcatgatcg cgacctcgac cgagctggcg ttggcgtgtc gcatgatatt
      661 ggagagcgcc tcttgaaggc tccggaatag cgccagctcc gcttcgggag aaaggggcgg
      721 cagccgatcc ggctcgtcca gggaagtggt gatcccgctg cgtgcggcaa agtcggcgac
      781 cagagatcgc agcgccggaa ggagacccag atcatccaga agggatgggc gtaggtcgtt
      841 cgtgacgttc cgaatgctct ggatgccggt gtcgatcaag gagagcacct gatccagacg
      901 ctcagcctgc tgccgatcaa tgctctcccg caggatgctg agctccattt tcacggccga
      961 gaacacctgc gccgtttcat cgtggagctc gcgagagagc cggcgtcgct ccgcttcgtt
     1021 ctgctggacc atgcgagccg aaagccgggc cagctcggtg ctgcggctct ccagccgggt
     1081 gtagagatca gcgttctcca gtgccgctcc cacctgatgg ccgagagcca acaagaactt
     1141 gtcgtcgagg gcagtaaacg ggtcgcgcgc ctccccaacc aacaccagaa ctgccgcgac
     1201 gtcagcatta cgcaggatag gtaacgcggc cgcataccca tattccgtat ggccgccccc
     1261 cacaggggac cagtcgcggg taaactgggg acgtcccgaa tgaacgacac cagccagagt
     1321 agacagagcc gacgctccta aggtgccatc cttccaggat gcgcacacac cggctccgcg
     1381 cagaaaccga accgtcccgc tatcggcgga gtacagcgcg gtccccgtaa cagcgggcaa
     1441 agccagaggc cgggagagta acacctcgag cacgtcctct tcgtcgccgg cgcgctgcag
     1501 gtctcctgac aaagcagaca aggccgccag tccacgacga agatcatcga aaacgagcaa
     1561 gaggatgccc gcgcccactg ctagagcgaa caggatgtcg aggtagtagc cccacggcgc
     1621 ccaactgccg cgggcgcgga gaaaggggta gtccaggtgg tgcagtcccc acagtccaaa
     1681 tgctatgctg agcagggtgg cgccgctgga gggaaccttg cgacggtatt ggagaaacac
     1741 ccatccggtc cacagcgtgg ccaggctgag aaagagaacc gcgggaccgg cagcccacag
     1801 gaagtgcttg agccggtaga tggccaggta ggaccagatc ggaggaaaga gcaccagccc
     1861 gagataccac cggtgccaac ggatctgttg ggaaaagacc agggctgcat agagcagcgc
     1921 aagagcggtc cagccggtgg cg
//
LOCUS       DASRPQ010000663         1054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3841578, whole genome shotgun sequence.
ACCESSION   DASRPQ010000663 DASRPQ010000000
VERSION     DASRPQ010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3841578"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            318..>1054
                     /locus_tag="VFD73_07735"
     CDS             318..>1054
                     /locus_tag="VFD73_07735"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HZI73909.1"
                     /translation="MRLQRFLSGLTLLLVFGVGAFQPPQAVRAESIRPAPAQQVSAFE
                     LILAMNTLRVSYGLPALIEDPIVNAVAQSTAATMAANNMSWHIGDVRGRIAAAGYGGG
                     GTVWATENFAVSSGGMGIDEIMAAWADPDHMRPAVNPEYCHVGAGSAQSADGRIYYIL
                     QAAYVGGQECGSVTSSPGGVPQPGGVPGVSQLIIPVKIATPDAEGKIFHEVQAGQSFW
                     SIAIAYQITIHDLEVWNNQSRDIPLKAG"
BASE COUNT          204 a          300 c          339 g          211 t
ORIGIN      
        1 catccaggtc gagcgtccgc cagttgcggg gaacacccgg atacgccagc agctcgttca
       61 ggagaatctg catgccggca tcggcacttc gcaggagatc gcggtggagc cactggatga
      121 gagcggcggc cgccggaagc agcacggcta actcctcgcc gcgcagtatg gctgcaaggg
      181 atagcgctga ctgacccgtt cgtcccgcca ggtgcggaaa gagttctttg tcaggcgatg
      241 ttctcgatga aagggtgatc ttatgaccag ggagacactt aaatcctgat ttaagcttgc
      301 ggaattataa ttaccgtatg cgtttacaac gtttccttag cgggctgacc ctgctgctcg
      361 tcttcggggt gggagccttc cagcctccgc aagccgtccg ggcggaatcg atccgtcctg
      421 ccccggcgca gcaggtcagt gcctttgagt tgatccttgc gatgaacact ctgcgcgttt
      481 cgtatggact tccggctctc atcgaggatc ccatcgtcaa tgctgttgcc caatcgacgg
      541 cggcgactat ggcagccaat aatatgtcct ggcacattgg agatgtgcgc ggccggatcg
      601 ctgctgctgg ctacggcggc ggcggcacgg tgtgggcgac ggaaaacttt gccgtgagca
      661 gcggcggtat ggggatcgac gagatcatgg cggcctgggc ggaccccgac cacatgcgac
      721 cggcggtcaa cccggagtac tgtcatgtgg gagccggttc ggcgcaatcc gcggacggga
      781 ggatctatta catcctgcag gcggcgtatg tcggcgggca ggagtgtggg agtgtgacct
      841 cgtctccagg aggtgtgcct cagccgggcg gggtgccggg agtatcgcaa ctgatcatac
      901 cggtcaagat cgccacaccc gatgccgaag gcaagatctt tcatgaggtc caggcgggac
      961 aatccttctg gtcgatcgct atcgcctacc agatcaccat ccacgatctg gaagtctgga
     1021 acaaccagtc ccgggatatc cctctgaaag ccgg
//
LOCUS       DASRPQ010000664         1026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1331314, whole genome shotgun sequence.
ACCESSION   DASRPQ010000664 DASRPQ010000000
VERSION     DASRPQ010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1331314"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..731)
                     /gene="kdsB"
                     /locus_tag="VFD73_07740"
     CDS             complement(<1..731)
                     /gene="kdsB"
                     /locus_tag="VFD73_07740"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: protein motif:HMM:NF003952.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HZI73910.1"
                     /translation="MRALGVIPARLGSTRLPHKPLQLLAGEPLITRVLERVLEHRVLA
                     DVVVATDSAAVANIVERCGVRAMLTSQAHPTGTDRVAEVAARPEFAGFDAVVNIQGDE
                     PFLSREALVGALSRVEQGDEIGTAAAPLAAALASDPSRVKVVTDCRGRALYFSRAAIP
                     YEREPTGTKSCYWQHVGIYAFSPDSIARWATLSPAPEEETERLEQLRALYHGMSIGVA
                     RLLEPVLPGIDTAEDLRRAEAHWHA"
     gene            complement(827..>1026)
                     /locus_tag="VFD73_07745"
     CDS             complement(827..>1026)
                     /locus_tag="VFD73_07745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73911.1"
                     /translation="ELEVIAWSADRPSGHEIMALSHRTLPIFGVQFHPESIATQHGKR
                     LLANFLALSRHATGAVSTATV"
BASE COUNT          201 a          319 c          335 g          171 t
ORIGIN      
        1 taagcgtgcc agtgagcttc tgcccgacga agatcttccg ctgtgtcgat accggggaga
       61 accggctcca gcagccgagc caccccgatg ctcatgccat gatagagagc gcgcagttgt
      121 tccagccgct cagtttcttc ctcaggtgcc ggtgagagcg tcgcccagcg cgcgatcgaa
      181 tccggactga acgcgtagat gccgacatgc tgccagtagc agcttttggt gccggtcggt
      241 tctcgctcgt atggaatcgc tgctcgcgag aagtagagcg ctcggccgcg acagtcggtc
      301 accaccttta cccgcgacgg atcggaggcc agcgccgcgg cgagcggcgc ggcggccgtg
      361 ccaatctcgt ccccctgctc cacccggctc agcgctccca ccaatgcctc gcgggagaga
      421 aacggctcgt caccctggat gttgacgacg gcatcgaatc cggcgaactc tggtcgagcc
      481 gcaacttcgg cgacccgatc ggtgccggtc ggatgagcct ggctcgtgag catcgcccgc
      541 accccgcacc gctcgacaat gttggctact gccgcggaat cggtcgccac cacgacgtca
      601 gccagcaccc tgtgctccag cacacgttcg agaacccggg tgatgagcgg ctcaccagcc
      661 agaagctgaa gcggtttatg ggggaggcgg gttgagccga gacgagccgg aatgacaccc
      721 aaggcacgca tcacggaagc taatcaagca cgagggtgga gtcaaaactc gtgccgtagc
      781 tattggaaag ctcgagcttg gagctagagg cttgtcttcg agagacttag acggtggcgg
      841 tggagaccgc tccagtggcg tggcggctca gagcaaggaa gttggccagc aaccgcttcc
      901 cgtgctgtgt ggcaatggac tcgggatgga actggacgcc gaagatcggg agcgtccggt
      961 gggagagagc catgatctcg tggcccgaag ggcgatcagc cgaccacgcg atcacctcga
     1021 gctcag
//
LOCUS       DASRPQ010000665         1185 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_706293, whole genome shotgun sequence.
ACCESSION   DASRPQ010000665 DASRPQ010000000
VERSION     DASRPQ010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_706293"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            83..>1185
                     /locus_tag="VFD73_07750"
     rRNA            83..>1185
                     /locus_tag="VFD73_07750"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          270 a          300 c          434 g          181 t
ORIGIN      
        1 cggcgcgacg agattgcgtg atgaagattg tagaacgcct agatagcgga tctactgcgc
       61 gtagtgcttg actgctggtt gtggtcaagc gactgaaggc cagtggggga tgcctgggca
      121 cacggaggcg atgaagggcg cggtaagctg cgataagccg gggggagccg cacacaggct
      181 gtgagccctg gatgcccgaa tggggaaacc cggccggcgg gaacgccggt cactcgcgtg
      241 agcgagagcg aacccgggga actgaaacat ctcagtaccc ggaggaagag aaatcaaccg
      301 agatgccccc agtagcggcg agcgaacggg gcggagccca aaccggtctc cttgtgggat
      361 cggggttgta ggacccacgg acggtacgtg agacggcagc tgaagtccgc tggaatgcgg
      421 cgccagagac ggtgacagcc cggtaagtga agccaaggca cgcgtgctag tggtgttcct
      481 gagtagcgcc atgctttcga ggaacgtggc gtgaagctgg ggggaccacc ctccaaggct
      541 aaagactccc gtgtgaccga tagtggacga gtaccgtgag ggacaggtga aaagcacccc
      601 agtgcgggga gtgaaataga tcctgaaacc actggcctac aagcggtagg aggacggcgt
      661 ctcgcaaggg acgcgcgtct gactgcgtgc cttttgcatt atgatccggc gagttacgcc
      721 tcaggcgcga ggttaaggcc tttagggccg gagccgcagc gaaagcgagt cctgtaacga
      781 gggcgcgtgg agtgcctggg ggtagacccg aagccagggc gatctaccca tgagcaggct
      841 gaagctgggg taacacccag tggagggccg caccggtatg ggttgaaaac cgttcggatg
      901 acttgtgggt aggggtgaaa ggccaatcaa gcctggagat agctggttct ccccgaaatc
      961 tattgaggta gagcctcgcg gcgggccgta tggccgtatg tcggcagggg gtagagcgac
     1021 tggatgggcg cggggggacg tggtccctac caaccccaac caaactccga atacctgacc
     1081 gatggaccgc gggaggcagt cgccgagcga taatgtccgg cggcgagagg gaaagaaccc
     1141 agagccacag ctaaggcccc gaagtggccg ctgagtatag cgaag
//
LOCUS       DASRPQ010000666         3124 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_393067, whole genome shotgun sequence.
ACCESSION   DASRPQ010000666 DASRPQ010000000
VERSION     DASRPQ010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3124
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393067"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..820
                     /locus_tag="VFD73_07755"
     CDS             <1..820
                     /locus_tag="VFD73_07755"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HZI73912.1"
                     /translation="SPRKKRPFVTVNCAAIPRDLVESEMFGHERGAFTGAIERRLGRF
                     ELAHGGTLFLDEVGDLSLEAQAKLLRTLETGELQRIGAEEVLRIDVRVVAATNRRLEE
                     AVEHGEFREDLFFRLNVFPIELPPLRDRLEDLPALVAHLAERVRPGHPASFSDSAVEA
                     LASYSWPGNVRELANLIERLSILSGPLVDGAAVRSVLRTGASAPAQANALAPLQGRPL
                     SDALDEFERGLITSALSQAQGSMAEAARILQTDRANLYRRMRRLGLEKTADIES"
     gene            847..2577
                     /locus_tag="VFD73_07760"
     CDS             847..2577
                     /locus_tag="VFD73_07760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73913.1"
                     /translation="MRLVVVGLLLVLAAPLWAQDSVIVIDPNARPAQPVVRGGPPTEL
                     IAQLIAFYNDSATTRMQGDVTLPAGSHFEGKLALYRGSLRVAGRVDGPITVANGTLYL
                     LPGASVNGDILVVGGRLLRSEQVEHRGSEQVYWDAAPVIRGTDGLLALRERRRHLGEI
                     ATARASFQTGQVRTTLSLSSGSYNRIEGLPVLFGPLFEYHPSPRVLARLDLRGILRTA
                     GEDTELRSDFGYVLRSDLRFTGSTEFGFGGRLYSEVAPIEDQPLSSAESGWSAFLLQR
                     DYRDYYERRGISGSAYILPTAALRFEVSLTRNSERSVRATDPWSLFRNSDRWRRNPLI
                     DDGHYFITAAQLDFDTRNNRDQPTTGWLIRGRFEHATSDDIAPVALPSVIRPTPPTGG
                     GYATDRILIDARHYARLTPGLRVNARVVADGWIAGDRLPLQRRVSLGGPDLLPGFDFR
                     AYTCAPRGFTDTADPALCDRMIATQLEVRTRMGLNLGFRLPDREGTRPGRFIGIEEAD
                     LVFLSDAGKSWLAGPGPGQVPVNRIPVLGEWALDLGVGLDTGEIGAYLVKSASNGEPV
                     KFVVRLQRRF"
     gene            2631..>3124
                     /locus_tag="VFD73_07765"
     CDS             2631..>3124
                     /locus_tag="VFD73_07765"
                     /inference="COORDINATES: protein motif:HMM:NF025692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HZI73914.1"
                     /translation="MAVLLTLHGRGVSAQDAQAVRLSVVLAADTTPNGARVPVVRSEN
                     FLGANSRWLSALRSGLPVRLHYRVEVWRSREGWFDTFVRQVQWDVLVRHEPLLDQYTL
                     LTFVGPSRQERRYATLDALGAALAFAYQVKVEPPEPGVYYYAASLQVATLSDADLDEL
                     ERYLG"
BASE COUNT          523 a         1011 c         1011 g          579 t
ORIGIN      
        1 cagtccgcgc aagaagcgac cgttcgtcac ggtgaactgt gccgccattc cgcgcgacct
       61 ggttgaatcg gagatgttcg ggcatgagcg tggtgccttc accggagcga ttgaacgccg
      121 gctcggacga ttcgagctgg cgcatggcgg aacgctgttc ctcgacgagg tcggtgacct
      181 gagtctcgaa gctcaggcca agctgctgcg aacgctggaa acgggcgagc tacagcgcat
      241 cggcgctgag gaagtgctcc ggatcgacgt gcgagtggtg gcagcaacca atcgaaggct
      301 ggaagaggca gtggagcacg gagaattccg cgaggatctg tttttccggc tcaatgtctt
      361 cccgatcgag ctccccccgc tccgcgatcg attggaggac ctgccggccc tggtggccca
      421 cctggcggag cgggtccggc ccggccaccc tgcgagtttc agcgacagcg ctgtggaagc
      481 gctcgcgtcc tattcctggc cgggaaacgt gcgcgagctg gccaacctga tcgaacggct
      541 cagcatcctg agcggacccc tggtcgatgg tgccgccgtt cgcagcgttc tccgtaccgg
      601 tgcgtcggcc ccagcgcagg ccaacgcgct ggcgccgctg caaggacgtc ctctgagcga
      661 cgcgctggac gagttcgagc gtgggctcat cacctcggcc ttatcacagg cccaaggcag
      721 catggcggaa gcagcccgaa ttcttcagac tgaccgagcc aatctgtacc ggcggatgcg
      781 tcggttgggc ctggagaaga cggcggacat cgagtcgtaa gacccctcag ccttcgagag
      841 cgccccatgc gcctggttgt cgtaggcctc ctgctggtgc tcgccgctcc gctctgggcc
      901 caggacagtg tcatcgtcat cgaccccaac gcgcgacccg ctcagccggt ggtccgcggt
      961 ggtcctccga cggagctgat cgcgcagctc atcgctttct acaacgactc ggcgaccacc
     1021 cggatgcagg gggacgtgac cttgccggcc ggcagccact tcgaggggaa gctcgctctc
     1081 tatcggggat ctttgcgggt agctggccgg gtcgacggtc cgattacggt ggccaacggc
     1141 acgctatact tgcttccagg cgcctcggtg aatggcgaca tcctggtggt gggtggccgc
     1201 ctcttgcgtt ccgaacaagt ggagcaccgc ggctcggaac aggtgtactg ggacgctgcg
     1261 ccagtcatcc ggggaactga cgggctgctc gccctccgtg agcggcgacg tcatctcggc
     1321 gagatcgcga cggctcgtgc ttcattccag accggccagg tccggaccac gctctcgctc
     1381 agtagcggca gctacaaccg gatcgaaggg ctgccggtcc tgttcggccc gctgtttgag
     1441 tatcacccca gccccagggt cctggctcgg ctcgatcttc gtgggatcct tcggaccgcc
     1501 ggcgaagaca ccgaactccg aagcgatttc ggctacgtcc tgcgcagtga cctccggttc
     1561 accggttcga ccgaattcgg ctttggcggc aggctctaca gcgaggtggc accgatcgaa
     1621 gaccagccac tctcgtcggc ggaatcgggg tggtctgcat tcctcctaca gcgcgattac
     1681 cgagactact acgaacgccg agggatcagc ggatccgctt acatccttcc aacagccgct
     1741 ctccgattcg aggtgtcgct caccaggaac tccgagcgct ccgtccgagc caccgacccg
     1801 tggtcgctct tccgcaacag cgaccgctgg cggcgtaatc cgctgatcga tgatggccac
     1861 tacttcatca ccgccgctca gctggatttc gatacccgaa acaacaggga ccagccaacc
     1921 acaggctggt tgattcgcgg ccgtttcgaa catgcaacca gcgatgatat cgctccggtt
     1981 gcgttgccca gcgtcattcg accgacccca ccgaccggcg gcggctatgc aaccgatcga
     2041 atcctgattg atgcgcgtca ttatgcccgg ttgaccccgg ggcttcgggt gaatgccaga
     2101 gtggtggccg acggctggat tgccggcgac cggctaccgc tgcagcgacg ggtgtcgctg
     2161 ggcgggcctg atctgctccc cggcttcgac ttccgggcgt atacctgtgc gccgcgcggc
     2221 ttcaccgaca ccgccgaccc cgccctgtgc gatcggatga tcgccaccca actggaggtt
     2281 cgtacccgta tgggactgaa cctcgggttc cgattaccgg atcgcgaggg aacccggccc
     2341 ggccgattca ttggtatcga agaggcagac ctcgtgtttc tcagcgacgc gggaaagtca
     2401 tggctggccg ggccgggccc gggtcaggtg ccggtcaatc ggatcccagt gctgggtgaa
     2461 tgggcgcttg atctcggagt ggggttggat accggggaga tcggcgcata cctggtgaag
     2521 agcgcgtcga atggagagcc ggtgaagttc gtcgtcaggc tgcagcgtcg gttctagtgc
     2581 gactctccca gcctggcacg ctcccgctgg cacgtcgggg gatcgcgctc atggcggtcc
     2641 tcctcaccct gcacggccga ggggtatccg cgcaggatgc tcaggcggtg cgtctcagcg
     2701 tcgtcctggc agccgatacc acgcctaacg gcgctcgcgt tcccgtggtc cgttccgaaa
     2761 actttctcgg ggcgaacagc cgctggctgt cggcattgag gtcgggcctt cccgtgagac
     2821 tccactaccg ggtcgaggta tggcgctctc gagaaggctg gttcgacacc ttcgtccgac
     2881 aggtccaatg ggacgtgctg gtacgacacg aaccgttgct ggaccagtac accttgttga
     2941 ccttcgtcgg acccagcaga caagagcggc gctacgccac actcgacgca ctgggcgccg
     3001 ctctggcctt cgcatatcag gtcaaggttg agccgccgga gcccggggtg tactactatg
     3061 ccgcctcgct gcaggtcgcg acactctccg acgctgatct ggacgagctg gaacggtatc
     3121 tggg
//
LOCUS       DASRPQ010000667         1300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_706489, whole genome shotgun sequence.
ACCESSION   DASRPQ010000667 DASRPQ010000000
VERSION     DASRPQ010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_706489"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..661)
                     /locus_tag="VFD73_07770"
     CDS             complement(<1..661)
                     /locus_tag="VFD73_07770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HZI73915.1"
                     /translation="MYIDAMEKTYFRKGFGLKNEIAGRLTADYHSSIVEALKANEYQL
                     RVGPLTFRLAREFGFCYGVDRAVEYAYETRTKFPDRRLFLVGEIIHNPHVNQKLAQMG
                     ITLLGHRANGEFDFGEVTPEDVVIMPAFGVTIGDFERLRAIGCVLVDTTCGSVLNVWK
                     RVESYARDGYTAIIHGKHYHEETKATASQVMKHPGGRYLVVFDMNEARLICDFIEHGG
                     GV"
     gene            complement(651..1118)
                     /locus_tag="VFD73_07775"
     CDS             complement(651..1118)
                     /locus_tag="VFD73_07775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73916.1"
                     /translation="MSWTGREPGSISAPATASWCASRHMLEVRGIQGDTGLALALYPA
                     ETLTAGVYRVVDPVRAESLPPRASVALRWLTSKVVQGFRGDGGTVRLERSSSGQVSGK
                     VSARARSVVDTQRLTISGSFRNVTLRSDPAECGHAVSSGGPNAAAEAEDTSVH"
BASE COUNT          257 a          423 c          366 g          254 t
ORIGIN      
        1 caacaccgcc tccatgctcg ataaagtcac agatgagccg ggcttcgttc atgtcgaaca
       61 cgacgagata tcgtccaccc ggatgcttca tcacctggct ggcggttgcc ttggtttcct
      121 cgtggtagtg cttgccatgg atgatggcgg tgtaaccatc gcgggcatag ctctccaccc
      181 gcttccacac attcaggacc gatccacacg tggtgtctac cagaacgcag ccaatggcgc
      241 ggagccgctc gaagtccccg atggtgacgc caaacgcggg catgatcacg acgtcttcgg
      301 gggtaacctc gccgaaatcg aactctccat tagcccggtg gcccagaagc gtgatcccca
      361 tttgcgccag cttctgattg acatggggat tatggatgat ctctcccacg agaaagagtc
      421 ggcgatcggg aaacttggtg cgggtctcat aggcgtactc taccgcgcga tcgacgccat
      481 agcagaagcc gaactctcgc gccaaccgga acgtcagcgg cccgacccgg agctgatact
      541 cgttggcttt gagcgcctcc acgatggagc tgtggtagtc ggcggtcagc cgtccggcga
      601 tctcgttctt gagaccgaat cctttgcgga agtacgtctt ctccatagcg tcaatgtaca
      661 ctggtgtcct cggcctcagc agcagcgttc ggacctccgg atgacacagc gtggccacac
      721 tcagcagggt ccgatcgcag agtcacattc cgaaagcttc cgctgatcgt gagtcgctgc
      781 gtgtcaacca ctgatctggc gcgcgcgctg actttcccgg acacctggcc cgagctcgag
      841 cgctccagac gaacggtccc accgtctccg cggaaccctt gtaccacctt ggatgtcagc
      901 cagcgaagcg ccactgatgc ccttggcgga agcgactcgg cacggactgg atctaccacc
      961 cggtagaccc ccgcggtaag ggtttcggcc ggatagagag ccagcgccaa cccggtatcg
     1021 ccctgaatgc cgcgcacctc gagcatatgc ctggaggcac accagctcgc ggtggctgga
     1081 gctgaaatcg atcccggctc ccgcccagtc cagctcacgt ccagtttccc tgcgccactc
     1141 gcccccttgg acgcagattg acatgctccg agccaggcaa ccaacaacat cgccattcgt
     1201 tgcatcttcg taacccggac gagttcaatg gagtatcgcc gctggacacg ctggttgcca
     1261 gccgagcgac gttcggcaag tcagggtaac tggtttactg
//
LOCUS       DASRPQ010000668         1394 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4466001, whole genome shotgun sequence.
ACCESSION   DASRPQ010000668 DASRPQ010000000
VERSION     DASRPQ010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1394
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4466001"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            274..759
                     /locus_tag="VFD73_07780"
     CDS             274..759
                     /locus_tag="VFD73_07780"
                     /inference="COORDINATES: protein motif:HMM:NF012859.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73917.1"
                     /translation="MALGITAAAATPARADVPWIFIQVVAGQNLCLQAGPGSQFQFQV
                     YAQPCNFTSSQNQWWQPIDQNGSGFKLENFQTGECLYADRVSDGTPIALWDCRANISN
                     ERWVWKTDSHGFGTLESRISGTTGHCVAPPAAQIPAGTAMQLSTCNDSVAQGLIGYST
                     P"
     gene            complement(1088..>1394)
                     /locus_tag="VFD73_07785"
     CDS             complement(1088..>1394)
                     /locus_tag="VFD73_07785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73918.1"
                     /translation="IPPRPVGYAALYDVADDWNPVYDRTSLAGFYVAIGTSGNQFKNT
                     PVVGRFMAALVQACENGHDHDSDPVRFTGPFTKNEINLGHYSRLRQPHAESTGNVMG"
BASE COUNT          259 a          442 c          463 g          230 t
ORIGIN      
        1 ggccgccggc ccagcgcccg gcttaggcct gcgaacgaac gttcgttcgc tagggcggag
       61 cgcctcgcat cgctcagcag gttcgtaggt gtactggctc ggccaggagc gtgccgacag
      121 ggctcctcgg gtccataggg cgaaggccgc gtttcagcgc cgtttcagcg cggcccagca
      181 ggatgtgcgg agccagtacc gccctgtggc gaaaggaaaa ctatgcgcct gataaaacaa
      241 cgccggaccg tcggcctgct gctggcagcg ggaatggcgc tcggcatcac cgccgcagcg
      301 gcgacgcctg cccgtgctga cgtgccctgg atatttatcc aggtcgtggc cgggcagaac
      361 ctgtgcctgc aggccggccc gggttcgcag ttccaattcc aggtgtacgc acagccctgc
      421 aacttcacta gtagccagaa tcagtggtgg caaccgatcg accagaacgg cagcggcttc
      481 aagctggaga atttccaaac cggcgagtgc ctatacgccg acagggtctc tgacggtacg
      541 cccatcgcct tgtgggactg cagagccaac atcagcaacg aacgttgggt ctggaaaacc
      601 gactcccatg gattcggcac gctggagtcg cggatctccg gcaccaccgg gcactgcgtg
      661 gctccccccg cggcgcagat ccccgccgga accgcgatgc agctatcgac ctgcaacgac
      721 tcggtcgccc agggcttgat tgggtacagc acgccatagc ccgagacacc cccgatagcg
      781 ggcgagaggg tgcaggcgta agaacggtta ccaggcccat agagcggagg tgtctcgtct
      841 ctatgggccg cagcccaacc tgcatagaag ctgatgaggc cgtccgaaag gggtatctca
      901 ccaagcgtgg aagttagtaa ctcagggtaa ccagtccacg ggcgggtatg cccagggctc
      961 gaccccctag cgccccacca ggtcacggtc tcgtcgaggc tgccccttaa cccgtttata
     1021 ccgaacgggg cggcgctcga gttcggcgaa caccccgagc aggggcgcgg ccggacgcca
     1081 gcctgactca gcccatcacg ttgcccgtgc tctccgcatg gggctggcga aggcgtgagt
     1141 agtgcccgag gtttatctcg ttcttggtga agggtccggt gaaccggacc ggatccgagt
     1201 cgtggtcgtg cccgttttcg cacgcctgga ccagggccgc catgaagcgg ccgacgacag
     1261 gagtgttctt gaactggttg ccgctcgtgc cgatggccac gtagaacccg gccagcgagg
     1321 tgcggtcgta gaccgggttc cagtcgtcgg cgacgtcata gagggcggcg tagccaacgg
     1381 gacggggcgg gatt
//
LOCUS       DASRPQ010000669         1306 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3524250, whole genome shotgun sequence.
ACCESSION   DASRPQ010000669 DASRPQ010000000
VERSION     DASRPQ010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3524250"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(101..>1306)
                     /locus_tag="VFD73_07790"
     CDS             complement(101..>1306)
                     /locus_tag="VFD73_07790"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HZI73919.1"
                     /translation="GLLIIGFLTFFEISMAAKILTLLLFTEIAILAIMAFGVLFKGGG
                     PDGLMPETLNPAIAFSPNGLQVAAPGLAMFIAFWSWTGFESTVMYGEESKNPRKIIPI
                     ATMIAVTGVGVFYTFVSWMSVAGNGAQGAIALAQSANPLDMFFHPTDVFVGHGWVLVM
                     EWLMMTGSFACAMAFHNAASRYMYSLGRERILPSILGRTHKKHGSPHVASFLQTGMAI
                     MWILGFWFFKKDPYLDVFTLLAILGTFMLVIVQTITMAAVFNYFRHHHPEESFWRTKV
                     APIVGGAGMLGVVILMLLNLDTAAGPASSSLLFKLIPYIAAALFLTGAGLALYFRKTD
                     PLKYETIGHVVLAEDGHGPVLDEEDPAPLHPIDLDDVRELEHQHNTANLDQELNTLEH
                     ENKLELEKD"
BASE COUNT          255 a          395 c          425 g          231 t
ORIGIN      
        1 acgccccggg cgccgccgcc gcacccttcc cgggcacagc aaaaagcgga tgcccccagc
       61 cgtgtacagc tgagagcatc cgctttcatg ggcgccggag ctagtctttc tccagctcga
      121 gtttgttctc gtgttcgagg gtgttgagtt cctggtcgag gttggcggtg ttgtgctggt
      181 gttcgagttc cctgacgtcg tcgaggtcga tcgggtgcag cggtgccggg tcttcttcgt
      241 ccaggaccgg gccgtggccg tcttcggcga ggacgacgtg gccgatggtt tcgtacttga
      301 gcggatcggt cttgcggaag tagagcgcca ggcccgcccc ggtgaggaag agcgcggcgg
      361 cgatgtacgg gatgagcttg aacagcaggg acgaggaagc aggtccggcg gccgtgtcca
      421 gattcaggag catcaggatc accacgccga gcatgccggc cccgccaaca atcggggcga
      481 ccttggtccg ccagaagctc tcttccgggt ggtggtggcg gaagtagttg aacaccgcgg
      541 ccatggtgat ggtctgcaca atcaccagca tgaaggttcc aaggatcgcc agcagggtga
      601 aaacatccag gtacgggtcc ttcttgaaga accagaaccc caggatccac atgatcgcca
      661 tgccggtctg caggaacgag gcgacgtgcg gggatccgtg cttcttgtgg gtccggccca
      721 ggatgctggg caggatccgt tcccggccca gggagtacat gtagcgggag gctgcgttat
      781 ggaaggccat cgcgcaggcg aaggatccgg tcatcatcag ccattccatg accagaaccc
      841 agccatggcc cacgaaaaca tcggtcgggt ggaagaacat atccagcggg ttcgcgctct
      901 gggccagggc gatggcaccc tgcgcgccgt tgccggccac cgacatccag gacacgaacg
      961 tgtagaacac acccaccccg gtcaccgcga tcatcgtcgc gatcggaatg atcttgcgcg
     1021 ggttcttgga ctcctccccg tacatcacgg tcgattcgaa cccggtccag gaccagaacg
     1081 cgatgaacat cgccagcccg ggcgctgcga cctgcagccc gttgggtgag aaggcaatgg
     1141 ccgggttcag tgtctccggc atcagcccgt caggcccgcc gcctttgaaa agcacaccga
     1201 aggccatgat cgccaggatc gcgatctccg tgaacagcag cagcgtcagg attttcgccg
     1261 ccatgctgat ctcaaagaag gtcaggaacc caatgatcag caggcc
//
LOCUS       DASRPQ010000670         1035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_77274, whole genome shotgun sequence.
ACCESSION   DASRPQ010000670 DASRPQ010000000
VERSION     DASRPQ010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77274"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..634)
                     /locus_tag="VFD73_07795"
     CDS             complement(<1..634)
                     /locus_tag="VFD73_07795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73920.1"
                     /translation="MDVFSELTQALNGSGAAAAVDLLIQRLEQERRHAEWFQARLMRT
                     RLELGLSLTDSPDQLPEASRAIYDGAQIETAREAGKRYLEDREILRAWPYFRAVGDHQ
                     PMIAAIENLQPDQFSEEILSLSFQEGLNPPKALELLLATSGICRAITVFDQYPDPATW
                     ERGLSMIAHSLHQELVQSLKLAINRREGSPPESGAIPDLIAGREWLFGEYD"
     gene            774..>1035
                     /locus_tag="VFD73_07800"
     CDS             774..>1035
                     /locus_tag="VFD73_07800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73921.1"
                     /translation="MFIVYVYVLYLAISLAVTVWVAGTLRRNGRVFLVHAFQGNTELA
                     DSINHLLVVGFYLINLGYVTLALRTSVPAETIRQAIELVSDKV"
BASE COUNT          187 a          318 c          314 g          216 t
ORIGIN      
        1 aatcgtattc gccgaacagc cactcgcggc cggcgatcag atcgggtatg gccccgcttt
       61 cgggcgggga gccttcccgc cggttgatcg ccagcttcag gctctgcacc agttcttggt
      121 ggagcgaatg cgcgatcatg ctcaaacccc gttcccatgt ggccggatcc ggatactgat
      181 cgaagaccgt aatcgcccgg cagattccgc tggtcgcgag caacagctcc agcgctttgg
      241 gaggattcag gccctcctgg aagctgagac tgaggatctc ctcgctgaac tggtcgggtt
      301 gaagattctc gatcgctgcg atcatcggct ggtgatcgcc gacggcccgg aagtagggcc
      361 aggcacgcag gatttctcga tcctccaggt accgtttccc ggcttcgcgc gcggtctcga
      421 tctgggcacc gtcgtagatg gcgcgcgagg cttccggaag ctgatccggt gaatcggtca
      481 gggacaaccc cagctccagg cgggtgcgca tcagccgcgc ctggaaccat tcggcgtggc
      541 ggcgctcctg ctccagacgc tgaatcagca ggtcgacagc cgccgcggcc ccgctcccgt
      601 tcagggcctg cgtgagctcc gagaatacgt ccataacgca ttcattatgg tacgtttgcg
      661 aagcccaatc cctcagtttt gaacgcattc aactttccta ttgacagttc ccgtctcccc
      721 gggtaagctc taattgaaca cgttcaagtt gaacatgttc aagaggaggc aggatgttta
      781 tcgtatacgt ctatgtgctg tatctggcca tcagcctggc ggtgacggtg tgggtggccg
      841 ggacgctccg caggaacggc cgggtgttcc tggtgcacgc gttccagggc aacaccgagc
      901 tggccgattc catcaaccat ttgctggtgg tcgggttcta cctgatcaat ctgggatacg
      961 tcaccctggc cctgcgcacc agcgtgccgg ccgagaccat ccgccaggcc atcgagctgg
     1021 tcagcgacaa agtgg
//
LOCUS       DASRPQ010000671         1188 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_393489, whole genome shotgun sequence.
ACCESSION   DASRPQ010000671 DASRPQ010000000
VERSION     DASRPQ010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393489"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..553)
                     /locus_tag="VFD73_07805"
     CDS             complement(<1..553)
                     /locus_tag="VFD73_07805"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZI73922.1"
                     /translation="MSLPRPIIVGTGIAGLWTAWRMASEGIPAVLVTKESLADSASAW
                     VQGGIAVALGPGDSPGQHAADTLAASGGLADPEAVHILTNEGPDRIYELLELGAVFDR
                     GPDGKLGLALEAAHTRPRIIHAGGDRTGAALVSCLAQLVRQHSEVELLEHTEVTELVV
                     RRGKVTGVTLLSGDGGCSNLPTSA"
BASE COUNT          217 a          378 c          372 g          221 t
ORIGIN      
        1 cggcggacgt gggaagattc gaacagccgc cgtcgccgct cagcagcgtc acccccgtca
       61 ctttgcctct tcggaccacg agctccgtta cctcggtgtg ctccaacagc tcgacttcgg
      121 aatgctggcg aaccagctga gcgaggcaac tgacgagcgc cgcgccggtc cggtctccgc
      181 cggcgtggat gatgcggggc cgggtatgcg ccgcttccaa tgcgagcccg agctttccgt
      241 cgggaccgcg gtcgaacacg gcgccgagct ccagaagctc gtaaatccgg tcggggccct
      301 cattggtaag gatgtgtacc gcttcaggat cagccaggcc gccgctggcc gccagcgtat
      361 ccgccgcatg ctgaccgggg ctgtcgccag gcccgagtgc cacggcgatc ccgccttgga
      421 cccaggcact ggcgctgtca gccagacttt ccttggtgac cagcactgcg ggaattccct
      481 cggacgccat ccgccacgcc gtccacaggc cggcgattcc ggtaccgacg atgatggggc
      541 gggggaggga catgatggga aatatacagc ggggcagcgg ggcggcgggg cagcggggca
      601 gtgctgaaac acagcttagg ttctcgtgaa aaccgcaatt cttgcgagat tttgatgctg
      661 tcgtcctcgg ctcccggtgt tactctggca catgaccgca tccatcccta cctctaatag
      721 gtctgatcga aagagacatg aggcctaaaa tcctggagag cgtgtcacga cctgacactg
      781 tcggtatatc gacttaccca gaagtggcct cgccatgagg cgtatggact aatctctcag
      841 gcgcgcagag ccgcttattc ggccgccgca accattgcgg agggtgctgc aaagcgggga
      901 gccgcggact ttaaacggtt cctcaatatc tcgttgggat cgctggcaga actctcatac
      961 atcctgttgc tggcgcgtga tcttgagtat ctgagaactg gggaatgggg tgagctggaa
     1021 gcacttcgag accacgccgg tcggctcacg tgggggctat accgctctat aacggcaaca
     1081 cggaaaggcc atttggataa cgagtaggat cgcagtacgt tctgccccgc tgccccgctg
     1141 ccccgctgcc ccgctgcccc gctgccccgc tgccccgctg ccccgctg
//
LOCUS       DASRPQ010000672         1164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4150955, whole genome shotgun sequence.
ACCESSION   DASRPQ010000672 DASRPQ010000000
VERSION     DASRPQ010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4150955"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..576)
                     /locus_tag="VFD73_07810"
     CDS             complement(<1..576)
                     /locus_tag="VFD73_07810"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HZI73923.1"
                     /translation="MTDADERSSTAAMSVDVEDWFQVENLKPVVARASWDSRETRVVR
                     NTSRILELLHAHGAHATFFVLGWIAERQPGLIRQIAEEGHEIASHGYGHDLVYTLSQT
                     EFRADVERGKKLLEDATGQRVIGYRAPSFSITDWAVGILQELGFEYDSSLFPTVAHDR
                     YGRLSGVDAGQPIVELRPGFHEVSISCLPLGR"
     gene            complement(586..>1164)
                     /locus_tag="VFD73_07815"
     CDS             complement(586..>1164)
                     /locus_tag="VFD73_07815"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HZI73924.1"
                     /translation="AGVARLGARFLRARLSGRSIARLAAQHSIPMVPATSVNAPEYLE
                     RVRRLAPDVIVSVAAPEIFRKEILRIPRLGCINIHSGRLPVYRGMMPTFWQMLHGEPA
                     VTVTVHEMAEALDAGKILGTVTVPLQPRDSLDRVISTTKEAGARLLIDVLTKIAQGQE
                     SRVPVDMTGKKYFSFPQREHVREFRKRGHRLL"
BASE COUNT          210 a          373 c          383 g          198 t
ORIGIN      
        1 ccttcccaat ggcagacagg agatggagac ctcgtggaaa ccggggcgca gctcgacgat
       61 gggttgtccg gcgtccactc cgctaagccg gccatagcgg tcgtgggcaa cggtggggaa
      121 gagcgaggag tcgtattcga atccgagctc ctggagaatg ccgacggccc agtcggtaat
      181 tgagaagctg ggggcgcggt agccgataac gcgctggccg gtggcgtcct ccagcagttt
      241 cttgccccgc tctacgtcgg cccggaactc agtctgactc agagtataca ccagatcgtg
      301 cccgtagccg tgggaggcga tctcgtgccc ctcttcggca atctgccgga tcaacccggg
      361 ttgccgctcg gcgatccagc cgagcacgaa aaaggtggcg tgggcgccgt gggcgtggag
      421 cagctccaga atcctgctgg tgttgcgcac cactcgggtc tcccgcgagt cccacgacgc
      481 ccgggcgacg accggcttca ggttctccac ctgaaaccaa tcctccacat cgactgacat
      541 tgcggcggtc gaagaccgct cgtccgcgtc cgtcatacga gatgcctaga gcagccggtg
      601 accgcgcttg cgaaactcgc gcacgtgctc gcgctgagga aaggaaaagt atttcttgcc
      661 ggtcatgtcc accgggacgc gtgactcctg tccctgagcg atcttggtca ggacatcgat
      721 gaggagcctc gctcccgctt ccttcgtcgt gctgatcacg cgatccagcg aatcgcgggg
      781 ctggagcggc accgtgaccg tccccagaat ctttcccgca tccagcgctt ccgccatctc
      841 gtgcacggtc actgtgaccg ccggctcacc gtggagcatc tgccagaagg tgggcatcat
      901 gccgcgatag accggcagcc ggcccgagtg gatgttgatg cagccaagcc ggggaatccg
      961 aaggatttcc tttcggaaga tctccggggc ggcgaccgag acgatgacat cgggcgcgag
     1021 ccgccgcacc cgctccaggt actccggggc attgaccgag gtggctggca ccatcggaat
     1081 cgaatgctgg gctgccaggc gcgcgattga ccggccgctc agtcgggcgc ggagaaagcg
     1141 ggcgccgagg cgggccacac cggc
//
LOCUS       DASRPQ010000673         3573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_393746, whole genome shotgun sequence.
ACCESSION   DASRPQ010000673 DASRPQ010000000
VERSION     DASRPQ010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3573
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393746"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(155..1177)
                     /locus_tag="VFD73_07820"
     CDS             complement(155..1177)
                     /locus_tag="VFD73_07820"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014414.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZI73925.1"
                     /translation="MDIASILLTAGAVIVALFAAYNVLHYVLFFLATHPKDAGRIGGV
                     LNEFERRQLVEWTPKADDFLKHDDENRTYDDVFGTYRGEHDNYSTCVFPRAVFTQPYS
                     AEHLLLEPVDGMRLLDLGCGSGAAAYALAKKCRVEIVGVTNSAVQAEICRRKFAAFDG
                     RVQVIVADFDHLDLPDESFDRIYALESIGYTKDLDAWLTRCWRMLKPGGRLLIRSPGA
                     LDGCRREDDYRSVTAFFENWRYNFFGANLLVFKLRQLGFDQIRYRRLPFWAWGMTWNF
                     IEHLLLWKFRLRMRTMVELEKIIWQTSKIFVFGNAYNIVLAAKPAVGASSLEGTDDPG
                     RAAAIR"
     gene            1590..2249
                     /locus_tag="VFD73_07825"
     CDS             1590..2249
                     /locus_tag="VFD73_07825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73926.1"
                     /translation="MTAKRIRLGLQLLGTIAIVAWIPGNAAKLVAMLVIWPLGFGGVS
                     RREVVLMIGVNLLFICMNLGALSKGAFRFTSPDALGMPMYEFVMWGFYTLNTIRFLDG
                     TAPRGSRWPTVILAAAFAATFSIVSEPGVLTLLSGTVLLISLALYREPMDFAYASYML
                     TVGASIEYVGVWTGQWSYPGNPLGGVPPWFIPMWGGVGLFTRRLLLPLLPQDAGSAAS
                     G"
     gene            2289..>3573
                     /locus_tag="VFD73_07830"
     CDS             2289..>3573
                     /locus_tag="VFD73_07830"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HZI73927.1"
                     /translation="MELPRALLDWSALLGQSCVLDAGAAQADYGRCTTGIRRRLAGAL
                     RPCDRSQIPPIVEIAARFKVSLYPISTGHNWGYGTALPPADDCVILDLSGLDRILEFD
                     AGTGLVTVEPGVTQEQLAEFLDRGAHRYLVPVTGAGPTCSLVGNALERGYGITPQADH
                     FGAVMALEAVMPDGRVYRSALSELGGQQLDRAFKWGIGPYLDGIFTQSGLGIVTQMTI
                     ALSRRPDGIKIFLFGLKRSEELGSLVELVREVNARFPGIVGGINLMNAHRMLAMAAPY
                     PHARLGPDGLMSPEVLAELSHENQVMPWTGFGTLYGSKEVVRAVQRDVRRLLRPLVSR
                     LVFISPEGGRMMARAGGLLPGYFRSKFARKLEMLERSLQLVAGRPNETALPLCYWNTR
                     KQPRAGVAMDPARDGCGVAWYSPLVPMKPESVAAYV"
BASE COUNT          620 a         1114 c         1153 g          686 t
ORIGIN      
        1 cgatgaccga gccaagcgcc cgctcaacca ccctgaagac gcgggcgcag ggcagctgac
       61 actgtcgccg gccgatatga gggagttgaa ccagggcggc agagaccaga cagcagccca
      121 tcgggtgccg ccgccgatct cccgtgccct ctggctagcg gatcgccgcc gcgcggcctg
      181 gatcgtcggt tccttcaagg gaagaggcgc cgacggccgg cttggcggcg agcacgatgt
      241 tgtaggcgtt gccgaatacg aagatctttg acgtctgcca gatgattttc tccagctcca
      301 ccatcgtgcg catccgcagc cggaatttcc acaagagcag gtgctcgatg aagttccacg
      361 tcatgcccca ggcccagaac gggaggcggc ggtaccggat ctgatcgaag ccaagctgac
      421 gcagcttgaa gacgagaaga ttcgcgccga agaagttgta gcgccagttc tcgaagaagg
      481 cggtcacgct ccggtagtcg tcttctcggc ggcacccatc cagcgctccc ggcgaacgaa
      541 tcagcagccg acctcccggc ttgagcatgc gccagcaccg cgtcagccag gcgtccaggt
      601 ccttcgtata gccgatcgat tcgagcgcgt agatccggtc gaagctctcg tccgggagat
      661 ccaagtggtc gaagtcggcg acgatcacct ggacgcgccc gtcaaaggcg gcgaacttgc
      721 gccggcatat ctcggcttgc accgcggaat tcgtcacgcc cacgatctcg acgcggcact
      781 tttttgcgag ggcgtaggcc gccgcccccg aaccgcaccc gaggtccagg aggcgcatcc
      841 cgtccaccgg ctccaggagg agatgctcgg cggagtaggg ctgggtgaag acggcgcgcg
      901 gaaagacgca cgtgctgtag ttgtcgtgct caccacgata ggtgccgaac acgtcgtcgt
      961 aggtgcgatt ctcgtcgtcg tgcttgagaa agtcgtcggc tttgggcgtc cactcgacga
     1021 gctgccgccg ctcgaattcg ttgaggacgc ctccgatccg ccccgcgtcc ttcggatggg
     1081 tggcgaggaa gaacagaacg tagtggagca cgttgtaggc cgcaaacaac gcgacaatga
     1141 ccgcgcccgc cgttagaagt atcgaggcta tgtccaccca acgctccctc gagcatagat
     1201 agccgcaagc cccgcaacgg gcccggtaca ttgtgcctgc tcgatctgcc caccgctagc
     1261 gccgtgactc cggcagggga tttgtccgtg ctgcccgagc tcccggtagc gctcctcttg
     1321 cgcgagccac ttccccgtcc cctcgggatc gatagaaggg ctgcgtatcg gggaggacgc
     1381 gctccttcca ggaccatgga cgctgagcct tcccggaagg cgagaagaga atggtggccg
     1441 aggaggatag cgctgacggc cctcggccaa acacccgcct cctcccccgg ccctgcgatg
     1501 agggtctccg cggcgaggaa ccataccgat ccctcgaagt tggatgattc tgagcccggc
     1561 attgctatcc tcgtaccagt gcccgactcg tgaccgccaa acgaatccga ctgggattgc
     1621 agctgctcgg gacgatcgct attgtggcgt ggatccccgg gaatgcggcg aaactcgtgg
     1681 cgatgctggt gatctggcca cttggcttcg gaggagtatc ccgtcgcgag gtggtgctca
     1741 tgatcggtgt caacctgttg ttcatctgca tgaaccttgg cgccctgagc aagggagcct
     1801 tccgatttac cagccccgat gccctgggca tgcccatgta tgagttcgtg atgtggggct
     1861 tctacactct caatactatc cgcttccttg acggaacagc ccctcggggg agtcgatggc
     1921 cgaccgtgat cctggcggct gcgtttgcgg ctacgttctc tatcgtgagc gaaccgggag
     1981 tcttgaccct gctgtcagga acggtcctgc tcatcagcct cgcgttatat cgcgagccca
     2041 tggatttcgc ttacgcctcg tacatgctca cagtgggtgc ctcgatcgag tacgtcgggg
     2101 tgtggacagg gcaatggagc tacccgggca atccgctggg cggggtacca ccatggttca
     2161 ttcccatgtg gggaggagtc ggattgttca ctcgcagatt gcttcttccc ttactgcccc
     2221 aagacgccgg atcagcagca tccggctgat gcggggccgc gatcgagctc gcgtcacgag
     2281 gacatccggt ggagcttcct agagcccttc tggattggag tgcgcttctc ggccaatcgt
     2341 gtgtgctcga tgccggggcg gcacaagccg actatgggcg ctgtaccacg gggatacggc
     2401 gtcggcttgc gggggccctg aggccgtgtg accgctcgca gattccgccg atcgtcgaga
     2461 tcgctgcccg cttcaaagtc tcgctctatc ccatcagcac cggccacaat tgggggtatg
     2521 gaacggcctt accgcctgcc gacgactgcg tgattctgga tctttccgga cttgaccgga
     2581 ttctggagtt cgacgcgggc acgggtctgg tgactgtcga gccgggggtc acgcaagagc
     2641 aactcgccga gttccttgac cgtggggccc accgatacct ggtgccggtt acgggtgcgg
     2701 gcccgacgtg cagccttgtc ggcaacgctc tcgagcgcgg ctatggcatc acgccccagg
     2761 ctgaccactt cggcgccgtg atggcgctcg aagcggtgat gccggatggt cgtgtgtacc
     2821 gctccgcgct gtccgagctc ggcggacaac agctggaccg cgccttcaag tggggaatcg
     2881 gcccctatct ggacgggatc ttcacgcaga gcggcttggg catcgtgacg cagatgacca
     2941 tcgctctctc ccgtcgcccc gatggcatca agatctttct cttcggcttg aagcggtccg
     3001 aggaactcgg gagcttggtg gagctggtgc gcgaggtgaa cgcccgattc ccggggatcg
     3061 ttggcggcat caacctgatg aacgcgcatc gaatgctggc catggcggcg ccctatccgc
     3121 acgcgcgact gggtcccgat ggtctcatgt ctcccgaagt gctggccgag ctcagccacg
     3181 agaatcaggt gatgccctgg acgggcttcg gcacgctcta tggctcaaag gaggtggtga
     3241 gagccgtgca gcgtgacgtc cgccgtctct tgcgacccct ggtgtctcgg ctggtattca
     3301 tcagcccgga gggcggacgg atgatggctc gagctggagg tctgttgccg ggctattttc
     3361 gttcgaagtt cgcccggaag ctggagatgc tcgaaaggtc cttgcagctc gtcgcggggc
     3421 ggccgaatga aaccgctctg cccctgtgct attggaacac tcgcaagcaa cctcgcgctg
     3481 gtgtcgccat ggatccggcc cgagacggct gcggcgtggc gtggtattca ccgctcgtgc
     3541 ccatgaagcc ggagagcgtt gccgcctacg tgc
//
LOCUS       DASRPQ010000674         1168 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3524684, whole genome shotgun sequence.
ACCESSION   DASRPQ010000674 DASRPQ010000000
VERSION     DASRPQ010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3524684"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            17..>1168
                     /locus_tag="VFD73_07835"
     CDS             17..>1168
                     /locus_tag="VFD73_07835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73928.1"
                     /translation="MRVILTAMKTYGIILADNGSNWYVSGAPDNRWDNDMLHLLDDLT
                     GNDFEAVNTAVLMKDPNSGATGSSVSGNTGIAGVTLSYNDGSPRTVASAADGGYSFPI
                     PHNWTGTVTPSHACFTFTPPNRSYSSVTTNQTAQNYTPAFNAASGCADIDVLVGGVNR
                     GSYGLLPGASTRASFSGVNSGPVEIRSTNGIALIGAERVIYKANGVNTSFSEMMGLPH
                     DLPDTTYWLPWYNNVDLDTQLRIANVTGSPASVNVTIGGTLMTGSPFNLAAGASTRLS
                     FQGVNAGPVQIVSTQAIVAAERVIYKVGGVNTSFTEMMALPASQLATTYWLPWYNNVD
                     LDTQLRIANVSGTVATVHVSVGGVEMQGSPFNLAAGESTRQSFPNINNGP"
BASE COUNT          244 a          380 c          356 g          188 t
ORIGIN      
        1 gagctacccg gcgcacatgc gggtcatcct gaccgcgatg aaaacctacg ggatcatcct
       61 ggcggataac ggatcgaact ggtatgtgtc cggcgcgccc gacaaccgct gggacaacga
      121 catgctgcac ctgctcgacg acctcaccgg gaacgacttc gaagcggtca acaccgccgt
      181 gcttatgaag gacccgaact ccggcgcgac gggctcctcg gtctccggca atacggggat
      241 cgcaggggtg acgctcagct acaacgatgg ctccccaagg accgtggcat ccgccgcaga
      301 cgggggatat tccttcccga tcccccacaa ctggaccggg accgtgacgc cctcccatgc
      361 ctgtttcacg ttcacgcccc ccaaccgcag ttacagcagc gtgaccacga accagaccgc
      421 gcagaactac accccggcgt tcaatgccgc ctcaggctgt gccgatatcg acgtcctggt
      481 gggaggtgtg aaccgcggca gctacgggct gctccccggc gccagcacgc gggcgagctt
      541 ctctggcgtg aatagcgggc ccgtcgagat ccggagcaca aatggcattg cactcattgg
      601 ggccgagcgc gtgatctaca aagccaatgg cgtgaacacc agcttctccg agatgatggg
      661 gctgccgcac gacttgcctg atacaaccta ctggctaccc tggtataaca atgtggacct
      721 ggatacgcag ctgcggatcg cgaatgtgac tggctccccg gcatcggtaa acgtcaccat
      781 cggcgggacg ctcatgacgg gcagtccctt caacctggcg gcaggtgcca gcacccgcct
      841 gagcttccag ggcgtgaacg ccggacccgt gcagatcgtg agcacgcagg cgattgtggc
      901 ggcggaacgc gtgatctaca aagtgggtgg cgtcaacacc agcttcaccg agatgatggc
      961 attgcccgcg agccagctgg cgacgaccta ctggctgccc tggtacaaca acgtcgacct
     1021 ggatacacaa ttgcggattg cgaacgtcag cggcacggtt gcgacggtgc acgtgtccgt
     1081 cggcggcgtg gagatgcagg gcagtccgtt caacctggca gcaggcgaga gcacccgcca
     1141 gagcttcccg aatatcaaca acggacca
//
LOCUS       DASRPQ010000675         1141 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_77654, whole genome shotgun sequence.
ACCESSION   DASRPQ010000675 DASRPQ010000000
VERSION     DASRPQ010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77654"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1063)
                     /locus_tag="VFD73_07840"
     CDS             complement(<1..1063)
                     /locus_tag="VFD73_07840"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZI73929.1"
                     /translation="MVANKAYSGSPKPTLAALKFFPFTSDSTEYTALKTGQVDVGNIP
                     TQDLPQKSPSSALPPTNPLGSSWTLQPFYNYGIQYAQPNFNNPQVGFMVRQLYMRQAL
                     QYVVDQPGLSKAIWRGYATPTSGPAPTTIPNPYAPPIQKSNAGQGPYPFSISKAKSLL
                     TSHGWAMSGGVMTCQDPAKCGTGITKGQQAKFTFNYSTGVAAATAMWQAIKFVPFTSD
                     SAEYTALKTGSVNVGNIPTQDLPPKPANSPVPATNPLGSSWTLQPFYSYGIQYAQPNF
                     NNPTVGFMVRQLYIRQALQYIVDQPGISKAIWRGYATPTSGPAPTTIPNPYAPSIQHE
                     NGGVGPYPFSISKAKSLLTS"
BASE COUNT          177 a          333 c          399 g          232 t
ORIGIN      
        1 ggctggtcag cagggacttc gccttggaga tgctgaacgg atacgggccc acaccgccgt
       61 tctcgtgctg gatggacggc gcgtacgggt tcgggatcgt ggttggcgcc gggcccgagg
      121 tcggggtggc gtatccgcgc cagatcgcct tggaaatccc tggctgatcc acgatgtact
      181 ggagcgcctg ccggatgtag agctgccgga ccatgaaacc caccgtcggg ttgttgaagt
      241 tcggctgcgc gtactggatg ccgtaggagt agaacggctg cagcgtccag ctgctgccca
      301 gcgggttggt cgccgggacc ggtgaattgg cgggcttggg cggaaggtcc tgggtgggaa
      361 tgttgcccac attgaccgac ccggtcttca gcgccgtgta ctccgccgag tcactggtga
      421 acggcacgaa cttgatcgcc tgccacatcg cagtagccgc agccacgccc gtcgagtagt
      481 tgaacgtgaa cttggcctgc tggcccttcg tgatgcccgt gccgcacttg gccggatcct
      541 ggcaggtcat gaccccgccc gacattgccc atccgtggct ggtcagcagg gacttcgcct
      601 tggagatgct gaacgggtac gggccctgcc cggcattgga cttctggatg ggcggtgcgt
      661 acgggttcgg gatcgtggtt ggtgcgggcc ccgatgtcgg agtggcataa ccacgccaga
      721 tcgccttgga gagccctggc tggtccacga cgtactgcag agcctgccgc atgtacagct
      781 gccggaccat gaaaccgacc tgcgggttgt tgaagttcgg ctgcgcgtac tggatcccgt
      841 agttatagaa cggctgcaat gtccagctgc tgccgagcgg gttggttggc ggcagagccg
      901 agctgggcga cttctgtggc agatcctgag ttgggatgtt gcccacgtcg acctgcccgg
      961 tcttcagcgc ggtgtactcg gtcgagtcac tggtgaacgg gaagaacttg agcgccgcca
     1021 gcgtcggctt ggggctgccc gagtaggcct tgttcgccac catggtcacg ttgccgttgg
     1081 tgttgaagct ggacagcttc cacgggccgt ccaccacctt ccacagcggg ctggtcgcgt
     1141 a
//
LOCUS       DASRPQ010000676         1071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_707609, whole genome shotgun sequence.
ACCESSION   DASRPQ010000676 DASRPQ010000000
VERSION     DASRPQ010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_707609"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..747
                     /locus_tag="VFD73_07845"
     CDS             <1..747
                     /locus_tag="VFD73_07845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73930.1"
                     /translation="EEGVPRWCWRRCCHRLLRPTRMGAVIDPSTDAFGAALLDYLDGK
                     EVPELALEVEGDDGIGPAMHPEWFFRGFERWEWWDRELLPRIERGPVLDLGAGAGRAG
                     LYLQERGLPVTAVEASPGAADVCRRRGLADVRLGDVNDPPADQAWAAMLLLCGNLGLG
                     GSWDGNRRLLGRLAELAAPGAVLIGDSVTPDRSPRVVLRIRYRDLVTPWWPQYNMPSG
                     QMGALVDGTGWRIDTHLEDGEDHAVLLRRT"
BASE COUNT          163 a          321 c          370 g          217 t
ORIGIN      
        1 gaggaaggag tgcctcggtg gtgttggcga cgttgctgtc acaggctgct gcgtccgacg
       61 agaatgggag ctgtgatcga tccctcgacc gacgctttcg gcgctgctct gctcgactac
      121 ctggacggca aggaggtacc ggagctggcc ctggaagtag agggtgatga tgggatcgga
      181 cctgccatgc atcccgaatg gttcttccgg ggcttcgagc gatgggagtg gtgggatcgg
      241 gaactcctgc cgcgcatcga acgcggtccc gtcctcgatc tcggagctgg agctggccgt
      301 gcaggcctgt atctgcaaga gcgcgggcta ccggtgaccg cagtggaggc ctcgcccggt
      361 gcggctgatg tatgccgccg ccggggccta gccgatgtgc gcctcggtga tgtgaatgac
      421 ccgccagccg atcaagcgtg ggcggccatg ctactgctgt gcggcaatct cggcttgggc
      481 ggttcctggg atggtaaccg gcgtctgctg ggtcgcctgg ctgagctggc cgcacctggc
      541 gccgtcctga tcggtgattc ggtgaccccg gatcgctcgc ctcgggtggt tctgcgcatc
      601 cgctaccggg atctggtcac cccctggtgg cctcaataca atatgccgtc tggccagatg
      661 ggcgcgctag tcgatggcac tggctggcgg atcgacaccc acctggaaga cggcgaagac
      721 cacgctgttc ttctgcgacg gacgtagtta cggccttgcg gacaaacggc gacgagacta
      781 gggatcactt gcttgcaagg tcggtttgcg cggcgggtca gcctgccctt acgcaggtga
      841 gctggtgtac cgtgctgtcg gggagtggcc gtgagttccc ggcgttgacc ggccgatcgg
      901 gcacgcagcg ggcacggcct cttcgtcccg aactacgcgg gaactgggac tctgcgctac
      961 ctctagagaa atcgatcgtc agcacgccgt tctctaccta gtgacgtgat ggatcgcggt
     1021 agacctccgt ttccccgtcc atccatctga ccctgatcac tgcctgcgtg c
//
LOCUS       DASRPQ010000677         1143 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1965827, whole genome shotgun sequence.
ACCESSION   DASRPQ010000677 DASRPQ010000000
VERSION     DASRPQ010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1965827"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..605)
                     /locus_tag="VFD73_07850"
     CDS             complement(<1..605)
                     /locus_tag="VFD73_07850"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73931.1"
                     /translation="MKITVLTYLDSENENSKDYEAVVPQVARALRSLGHRVSILGVHG
                     DVKRLIAGLSRRKPDLVFNLMEMFAENVFGDIPVAGLLDLLGLKYTGSGPGELYLSQD
                     KGLTKKLLAFEEILYPRFAVFSKQQALETGGNLRMPLFVKPLRSDSSLGIGGKSLVHD
                     AVALMERVTAIRKELNDSALAEEYIEGREFYVGVLGNGQPKA"
     gene            complement(602..>1143)
                     /locus_tag="VFD73_07855"
     CDS             complement(602..>1143)
                     /locus_tag="VFD73_07855"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HZI73932.1"
                     /translation="HARFGIPVLVAHEVYPGHHLQLLTMEGLGSEVRRHLWSPLMVEG
                     WALYAERLMQEAGYYQSDETHLFQLVTLLWRAIRVVLDVGLHVRGMTPSEATDYLVEH
                     MPIERRNAEAEVRRYCGMPTYQLCYAVGLRELLSLREAYQETRGCAFSLRAFHSQLMA
                     YGGMPVALARWGMDLAESS"
BASE COUNT          220 a          365 c          344 g          214 t
ORIGIN      
        1 gccttcggct gcccatttcc cagcacgccg acatagaact cgcggccctc gatgtactct
       61 tccgccagcg ctgaatcgtt cagctccttg cggattgcgg tcacccgttc catcagcgcc
      121 acggcgtcgt ggaccaggga cttgccgccg atcccaagcg aagagtccga gcgcagcggc
      181 ttcacgaaga gcggcattcg caggttgccg ccggtctcga gagcctgctg cttggagaag
      241 acggcaaagc ggggatacaa aatttcttcg aaggcaagca gcttcttggt gagtcctttg
      301 tcctggctca gatagagctc gccgggaccg ctgccggtgt acttgagacc gagaagatcg
      361 agcaagccgg cgaccggaat gtcgccaaag acgttttcgg cgaacatctc catcaggttg
      421 aacaccaggt ccggctttcg gcgcgacaga ccggcgatga ggcgcttcac gtcgccgtgg
      481 acgcctagaa tggaaacgcg gtgtcccagg ctccggagcg cgcgggccac ctggggaaca
      541 actgcctcat agtccttcga gttttcgttc tcgctgtcga ggtaggtcag gacggtaatt
      601 ttcatgatga ctccgccaga tccattcccc atcgtgccag cgccaccggc attccgccat
      661 atgccatcag ctgggagtgg aacgctcgca ggctgaaggc gcagccccgc gtctcttggt
      721 acgcctcgcg cagactcagc agctctcgta atcccacggc gtaacacaac tgatatgtcg
      781 gcatgccgca gtagcgccgg acctcggctt cggcgttacg gcgctcgatc ggcatgtgct
      841 cgaccaggta gtcggttgct tcggatggag tcatcccgcg tacgtggagc ccgacgtcga
      901 gcaccacccg aatggctctc cagagcaggg tcacgagctg aaacaaatgg gtctcgtcgc
      961 tctgataata cccggcctcc tgcatcagtc gctcggcgta gagcgcccaa ccttctacca
     1021 tgaggggact ccacaggtgc cggcggacct cggaccccag gccctccatc gtgagcagct
     1081 gaaggtggtg cccggggtag acctcgtgtg ccaccagcac cggaatgccg aagcgagcat
     1141 gcg
//
LOCUS       DASRPQ010000678         1714 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2898767, whole genome shotgun sequence.
ACCESSION   DASRPQ010000678 DASRPQ010000000
VERSION     DASRPQ010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2898767"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            444..1316
                     /locus_tag="VFD73_07860"
     CDS             444..1316
                     /locus_tag="VFD73_07860"
                     /inference="COORDINATES: protein motif:HMM:NF040183.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI73933.1"
                     /translation="MITAQPGSGPTVLRMLLGSQLRRLREAKGVTRDDAGYTIRASGS
                     KISRMELGRVSFKERDVQDLLDLYGVGEEEAESLIALAKQANSHGWWHKYGDVLPDWF
                     QVYVGLEEAASLIRLYEVQFIPGLLQTAEYARAVVQLGQPSATPEEVERRVGLRLARQ
                     EVLTKPGGPRLWAVVDEAALRRPIGGREVMRAQLVRLTEVAGEANITLQVVPFRSGGH
                     AAEAGAFTIMRFPEVDLPDVVYLEHLTSALYLDKREDVQKYTEVMERLRVEGESPERT
                     IEILSGMLEEVIDE"
     gene            1313..1558
                     /locus_tag="VFD73_07865"
     CDS             1313..1558
                     /locus_tag="VFD73_07865"
                     /inference="COORDINATES: protein motif:HMM:NF016070.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF397 domain-containing protein"
                     /protein_id="HZI73934.1"
                     /translation="MKMYNGMPATEIKGAGWRKSSASNSQGACVELAKLGRDEFAVRN
                     SRYPDGPALIYTHAEVAALIEGVKMGEFDDLLGEVTI"
BASE COUNT          303 a          509 c          610 g          292 t
ORIGIN      
        1 tccatgcccc acaggttcag cgtgacccgg gtgaagttgc ggccggcttt caccgattcc
       61 gggtgcgcgc cgagcgtgca tgtcgccgtg ggctgctcgg tggctgacgc cgcatcgcag
      121 agcaagggag gtgccgaaag caaggggctc tcctggcgca tgctcccggg cctgctcgcc
      181 gtgaggagtt gatcctcaga cacctcgtta acctccgttg tcttaggcga ggtggcccgg
      241 tgggaggtga tggaagtccc atcgattaac gctgccgccg taagtcgtgc gcttgcggcg
      301 caagcgctat catcccctct ataccttgca aacgcaaggc cggatgcacg tgcagatgga
      361 agtgcttggt gcacgtgcga ctgacgggga ggtcgtgcga aggttttgcg tatccattgc
      421 cggagcgaac tcagggagcg cgcgtgatta cggcacagcc gggcagcggc ccgaccgtgc
      481 tgcgcatgct gctgggttcc caactccgca ggctgcgcga ggccaagggg gttaccaggg
      541 acgacgccgg atacacgatc cgggcttccg gctccaagat cagccggatg gaactggggc
      601 gggtcagctt caaagaacgc gacgtacagg acctgcttga cctctacggt gtgggcgagg
      661 aggaggccga gtccctgatt gccctggcta agcaggcgaa ctcgcacggc tggtggcaca
      721 agtatggcga cgtcctgccc gactggttcc aggtctacgt gggcctggaa gaggcagctt
      781 cgctgatacg gctctatgag gtgcagttca ttccagggct gcttcagacg gccgaatatg
      841 cacgggccgt ggtccagctg ggccagccct ccgcgacgcc cgaagaggtc gagcgccggg
      901 tgggcctgcg tctggccagg caagaagtgc tcacgaagcc gggcgggccc cggctgtggg
      961 cagtggtgga cgaggcggcg ctgcgccgcc ccattggtgg cagggaggtg atgcgcgccc
     1021 agcttgtccg gctgaccgag gtggcggggg aagccaacat cacgcttcag gtggtgccct
     1081 tccggtccgg aggccatgcg gctgaggccg gagcgttcac catcatgcgg tttcccgagg
     1141 ttgacctccc cgacgtggtt tacctcgagc acctcacaag tgctctctac ctcgacaagc
     1201 gcgaagacgt ccagaagtac accgaagtca tggagcgcct ccgcgtcgag ggtgagtcac
     1261 ccgaacgaac aatcgaaatc ttgagcggga tgcttgagga agtcatagac gaatgaagat
     1321 gtacaacgga atgccggcga ccgagatcaa gggtgccggc tggcgtaaga gcagtgccag
     1381 caactcgcag ggtgcctgtg tggaactggc caagctgggc agggacgagt tcgcggtccg
     1441 gaactctcgg tacccggacg gccccgcgct gatctacacc cacgcggaag tcgccgcgct
     1501 gatcgaaggc gtcaagatgg gcgagttcga cgacctgttg ggcgaggtca ccatctaata
     1561 gcacggtttc ccacgggtcg cggccgtgcc gcggccgggc gggagtaaag ctggccgccg
     1621 cgttcaatac cggacgcggc ggccggcgcg tatctgcgat cgggttcgcg ccctcggtct
     1681 gcgcgtggcg cggagccggg tgtgcgggga cccg
//
LOCUS       DASRPQ010000679         1027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2271968, whole genome shotgun sequence.
ACCESSION   DASRPQ010000679 DASRPQ010000000
VERSION     DASRPQ010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2271968"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..475
                     /locus_tag="VFD73_07870"
     CDS             <1..475
                     /locus_tag="VFD73_07870"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI73935.1"
                     /translation="AERREDERSEADRSSAVGKTVAPPPVAPGRPDPEVVADARRRTF
                     TAEYKLRILAEADAAATHSGAIGALQRREGLYSSHLVTWRRERREGMLKGLTPQRRGP
                     KSKRNPQEDEMQKLRRENQRLTEELRKAEIIIDVQKKVSTLLGWPLPKADVEEQS"
     gene            475..>1027
                     /locus_tag="VFD73_07875"
     CDS             475..>1027
                     /locus_tag="VFD73_07875"
                     /inference="COORDINATES: protein motif:HMM:NF012870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HZI73936.1"
                     /translation="MDAVTHLAPVVGVIAACDSLSVARASFYRQRPLFGPSSSPAPMS
                     ALPAQRSAPARSLSPSERAGVLAVLHEERFQDRSPAAVQATLLDEGQYLCSVRTMYRI
                     LQLEGESGERRDQLVHPAYQKPELLATGPNQLWSWDITKLRGPVKWTYCYLYVILDVF
                     SRYVTGWMVATRESAELAKQFLEE"
BASE COUNT          193 a          322 c          312 g          200 t
ORIGIN      
        1 cgcggaacgt agggaggacg agcgaagcga ggccgaccgg agttctgcgg taggcaaaac
       61 cgtcgcgccg cctccggtgg cgccgggacg tcctgatccg gaggttgtcg ctgatgccag
      121 gcgacgaact ttcaccgccg aatacaaact gcgcatcctg gctgaggctg acgcggctgc
      181 cactcattcc ggcgcgatcg gtgctctgca gcggcgcgag ggactgtact cttcgcacct
      241 ggtcacttgg cgtcgcgaac ggcgggaggg aatgctcaag ggtttgaccc cgcagcggcg
      301 tggtcctaag tccaaacgga atccgcagga agatgagatg cagaagctcc gccgggagaa
      361 ccagcgcctc acagaggaac tacgtaaagc cgagatcatc attgatgttc aaaaaaaagt
      421 gagcactctg ttgggttggc cgctgccgaa ggcggacgtc gaggagcaat cctgatggac
      481 gccgtcaccc atttggctcc ggtggtgggc gttattgccg cctgtgattc tctctccgtg
      541 gcccgcgctt ccttctatcg ccagcgtccc ctctttggcc catcctcatc gccggccccc
      601 atgtcggctt tgccagcaca gcggtcggct cccgcccgct cgctcagtcc ctccgaacgc
      661 gccggcgtct tggccgttct ccatgaagaa cgcttccaag accgctctcc ggcagccgtg
      721 caggctacct tgttagacga aggccagtac ctctgctcgg ttcgcaccat gtatcgcatc
      781 ctgcaactgg agggagaatc tggtgaacgc cgcgatcagc tggttcatcc ggcctaccaa
      841 aaaccggagt tgctggccac cggtcccaac cagctttgga gttgggacat caccaagctg
      901 cgcggtccgg tcaagtggac gtactgctat ctgtacgtca tcctcgacgt ctttagccgc
      961 tatgtcaccg gctggatggt tgcgactcgg gagagtgccg aactggccaa gcaattcctc
     1021 gaagagg
//
LOCUS       DASRPQ010000680         1029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1645503, whole genome shotgun sequence.
ACCESSION   DASRPQ010000680 DASRPQ010000000
VERSION     DASRPQ010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1645503"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /locus_tag="VFD73_07880"
     CDS             <1..414
                     /locus_tag="VFD73_07880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73937.1"
                     /translation="RGSPDDPAWCGTWTLILPGGQELAVCIEPVPTYACDHRHESHAY
                     QPNDALRHLVQVRDYTCTFPPCSRHARESDFEHAQPYDKGGRTCSCNAGARSRRCHRI
                     KQSSGWKVTQPNPGWHEWTTPSGRTYVQTPYRYPV"
     gene            425..919
                     /locus_tag="VFD73_07885"
     CDS             425..919
                     /locus_tag="VFD73_07885"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI73938.1"
                     /translation="MDRPGADGAGHYEQMDVEVVEALDDDRTVIRRLLQLYHYDFSEF
                     DGSDVNPHGEYLHRYFDEYWTDSDRKAFLFRVEGALAGFALVFTGEPHDIAEFFVMRK
                     YRGGGVGAQAAASLFDRFPGRWTVRQQLTNPAATAFWRKAIGYPFQEYEQGAEIVQSF
                     TAGL"
BASE COUNT          198 a          336 c          311 g          184 t
ORIGIN      
        1 cggggttcac cagatgaccc ggcctggtgc ggcacctgga cgcttatcct gcccggcggc
       61 caggaactcg cggtatgcat cgagccggtt cccacctacg cctgcgatca ccggcacgaa
      121 tcgcacgcct accagccgaa cgacgcgctc cgccacctgg tccaggtccg cgattacacc
      181 tgtaccttcc cgccgtgctc gcggcacgcc cgcgaatcgg acttcgaaca cgcccagcca
      241 tacgacaaag gcggccgcac ctgcagctgt aacgcgggcg cccgcagcag aagatgccac
      301 cgaatcaagc agtcatccgg ttggaaggtc acccagccca accccggctg gcacgagtgg
      361 acaaccccaa gcggcagaac gtatgtccag accccttatc gatatccggt gtgagtactg
      421 aagcgtggat cgccccggcg cggatggagc ggggcattat gagcagatgg acgtagaggt
      481 ggtcgaagcg ctcgacgacg accggaccgt catccgacgg ctacttcagc tgtatcacta
      541 cgatttctcc gagttcgatg gcagtgacgt caatccgcac ggggagtacc tgcatcggta
      601 cttcgacgag tactggactg actcagaccg caaggcgttc ttgttccggg tagagggtgc
      661 gctggctggc tttgccttgg tctttaccgg agaaccgcac gacatcgccg aattttttgt
      721 gatgcgcaag taccggggcg gcggagtcgg ggcgcaggct gccgcttcct tgttcgatcg
      781 gttcccagga cgttggaccg tccggcagca gctgacgaac cctgctgcaa cggccttctg
      841 gcgtaaagcg attggctacc cgtttcagga gtatgagcag ggcgcagaaa tcgtccagtc
      901 gttcactgcg ggcttgtagc ggctgccagc tagcaattgg cggctgccgt actagccggc
      961 accacagccg gtcaaccact gggaacccgc acttttgcgg caaccctcgc cccttacccg
     1021 cgccaacgg
//
LOCUS       DASRPQ010000681         1366 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_78477, whole genome shotgun sequence.
ACCESSION   DASRPQ010000681 DASRPQ010000000
VERSION     DASRPQ010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1366
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78477"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            245..643
                     /locus_tag="VFD73_07890"
     CDS             245..643
                     /locus_tag="VFD73_07890"
                     /inference="COORDINATES: protein motif:HMM:NF025852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4437 domain-containing protein"
                     /protein_id="HZI73939.1"
                     /translation="MSGEAESAGQVHSRDTNTMPWEIRHIDELDGDLAAKPLIEDPDT
                     GMSVMKMKYFAGFTNEWHTHNCAHGMYVLDGILKTHAGSFGPGSFVWFPEGSEMEHGA
                     TQDNDVTFLFIANKPVDIHYTQADQAEPAG"
     gene            complement(824..1186)
                     /locus_tag="VFD73_07895"
     CDS             complement(824..1186)
                     /locus_tag="VFD73_07895"
                     /inference="COORDINATES: protein motif:HMM:NF020317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GYD domain-containing protein"
                     /protein_id="HZI73940.1"
                     /translation="MTLYMYQASYTAKSMAAQLTEPHDPMEAIAPTLEELGAKVLVAG
                     FPFGEYDVLIVYEAADDVTAASVAMAIAAAGEVKSAKTTRLLSGQEWLESLRKRRIVT
                     TRKAPQPHDYQSESPEPS"
BASE COUNT          250 a          437 c          443 g          236 t
ORIGIN      
        1 aacgcgacca agagcctgct gctcaccagc atcgtcacgc tgctgctcct cgtgctgctg
       61 ctgtcgacag cgctggccgc ccgcccgctc cgcaggctgc gttcgggcgc cttcgacgcc
      121 gtgacccgct gatcacgaga accgccagcg tccgcttccg gccggtctca gattgggcct
      181 ggctggctcg ccggcccagg gcaggatggc gtcagcagat gatcatgagc gaaggaggcg
      241 gccgatgtcc ggggaagctg aatcagcggg ccaggtgcat agccgggaca cgaataccat
      301 gccgtgggag attcgccata ttgacgagct cgacggcgat ctcgcggcga aaccgctcat
      361 cgaggatcca gacaccggga tgtcggtgat gaagatgaag tactttgccg ggttcaccaa
      421 cgaatggcac acgcacaact gcgcgcacgg catgtacgtc ctcgacggca tcctgaagac
      481 gcacgctggt tcgttcggcc cgggcagttt cgtgtggttc cccgaggggt cggagatgga
      541 gcacggcgcg acccaggaca acgacgtgac cttcttgttc atcgcgaaca agccggtcga
      601 catccattac acccaggccg accaggcaga gccggccggg taggaggcta gctggccggc
      661 actggcgctc ggctcaccta tcgtggcagg gactggccga cctggcggta agggccagag
      721 tccggttgtc cccgcgaggg gttcaagaag cgtcaggaag tagacccggc ctggccgcca
      781 gtccgaagaa cgccacgcgg catatgaaga tcttgggacc gctctatgag ggttctggcg
      841 attcgctctg atagtcgtgc ggctggggcg ctttccgcgt ggtgacaatc ctgcgcttgc
      901 gcaaggactc gagccattcc tgcccgctga gcagccgtgt ggtcttggcc gacttgacct
      961 cgcccgcggc ggcaatagcc atcgcgacgc tggcagcggt cacatcatca gctgcctcat
     1021 acacgatgag cacgtcatac tcgccaaacg gaaagccagc caccaagacc ttggctccca
     1081 gttcctccag tgtcggcgcg atcgcttcca tggggtcgtg cggctcggtg agctgagccg
     1141 ccatcgactt ggcggtatag gaggcctggt acatgtagag cgtcatcgag attctcctca
     1201 ggtgggatct cagacgcagg gatcacctgc tagtccctgt gacacccggc gactgccgtc
     1261 gacgtgggcg aggcaagggg ctgcagaccc ctgcggtctg aagatcgtag accgggcccg
     1321 gacgggcgca ccagcctccg cctcgccctg acggcttcac caccat
//
LOCUS       DASRPQ010000682         1949 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3843656, whole genome shotgun sequence.
ACCESSION   DASRPQ010000682 DASRPQ010000000
VERSION     DASRPQ010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1949
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3843656"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..210
                     /locus_tag="VFD73_07900"
     CDS             <1..210
                     /locus_tag="VFD73_07900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73941.1"
                     /translation="LDGARDRYEQALLLYQAVADPYSIGWVLVRLARLDTADSERIRH
                     WTAARQAWASIGREDLIESTEAEFE"
     gene            599..859
                     /locus_tag="VFD73_07905"
     CDS             599..859
                     /locus_tag="VFD73_07905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73942.1"
                     /translation="MKPSWWAKRSRHSQGGKHCYHEPQTRLFSDFTGHGRSGSQADSD
                     QIAVLAAGMRVSSPEPAVGVFTTAGTCQGRLRRHFVIGYAAP"
     gene            complement(1432..1734)
                     /locus_tag="VFD73_07910"
     CDS             complement(1432..1734)
                     /locus_tag="VFD73_07910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73943.1"
                     /translation="MPEEAVTPPPAGQPGHGSGEVCLRRQPVRIVDGRGEGGYTDMYE
                     LICPSCGDHRDLDYSEISPRLQWLRGPYILEAGLTVFHRHQGIPWTTPEWKLQGPG"
BASE COUNT          365 a          633 c          636 g          315 t
ORIGIN      
        1 ctggacggcg cccgggaccg gtacgagcag gcgctgctgc tgtaccaggc agtcgcggat
       61 ccttactcca tcggctgggt actcgtccgc ctggcccggc tcgacacagc agacagcgaa
      121 cggatccgcc actggacagc agcccgccag gcatgggcca gcatcgggcg agaagatctc
      181 atcgagtcaa ccgaggctga attcgagtaa cggccgaccg ctaaccctga ctacgcccgc
      241 cgggcagggg catcgtcgtg cagttaacgt gcaatcagcc agggtcatga gggggtggtt
      301 gtgacgcctt tagatggccc caccgggacg gcctcaagcg gccccaccac gaatcggaca
      361 ctcccgatgt cggcttgaaa tgaccccgcc ccgtggttgc ggtaaaccgc cgtcctggag
      421 tgcgccttcc tcggctgctg cctgatcgct ggcgacgagc tgcaggtcaa ggtggagcgc
      481 ccgcagcgaa gcgaggacga acgaccttga ggtgcggtga gcgcctgcca cgatgaggct
      541 gcgaggaagg cagggtgggg ccagatctgg ccgtcacgcc atcgcaaggt ggagccagat
      601 gaagccgtcc tggtgggcca aacgaagccg tcatagccaa gggggcaagc actgctacca
      661 cgagccccag accaggctgt tcagcgactt caccggccac ggtcggtccg gttcccaagc
      721 tgatagcgat cagatcgcgg tgctggcagc cggaatgcgg gtgtcctccc ccgaacccgc
      781 cgtaggagtg ttcacgacag ccggaacctg tcaagggcgc ctgcggcgtc acttcgtgat
      841 cggctacgcc gccccttgac agaacccgtc tgccgtcagg tccggcagct atcgggttcg
      901 ggggaggggc ctgggacagg acagagcgcg gccaggttgc cggaaacagg ccgggagtga
      961 gtgaagagga tcagggcgtt acgctgtcgt cagctggggc gcggaccggc cgcaagatac
     1021 gcgggatata cgcgggatgg atcttgctca gcaagcaccc gagtaccgac gacgcaggta
     1081 acagtgccgc agggtcgtga aacgccgacg ctcttgaaaa ccattgtggc ggtaacgtca
     1141 ccgtgggttc gaatcccacg ccctccgctc tgacctcggt aaaccggttc tgacctgggc
     1201 ttatgcccgc ctttctcacg tcgcaggctc gtcaccgacc gcagccagat gcagccgtca
     1261 gcgtccgggc agccgcccag gtatgggtgg tgtcgcagat catgccaccg gccgtcctga
     1321 atagccgtcc atctgcggcg gtccagcgcg gctcacacgt cacgcagacc agtgcgtacc
     1381 cagccgtctt gcctcactgg tcgttgtcca gctcgcggtc ctggccttcg cctagccagg
     1441 accctgaagc ttccactctg gcgtcgtcca gggaatcccc tgatgcctat gaaacacagt
     1501 caggcccgcc tcaagaatgt acggcccgcg aagccattga agccgcggcg agatctccga
     1561 gtaatccaga tcccgatgat cgccgcagct ggggcagatc agctcataca tgtcggtgta
     1621 gccgccctcg ccacggccgt ccacgatacg gaccggctgg cggcgcagac agacctcccc
     1681 gctgccgtga ccgggctgac cggcaggcgg gggtgtcaca gcctcctcag gcacgatgcg
     1741 tagccaccgg tcacggcgat cacggggacg cggtacggag acagcggctg gtccggaaac
     1801 ggttccggta tcggtcacgg tgtcaggatc gccaggactg ctcattcaac tcaccgccag
     1861 gcaagaattc ctgcactgcc ggggtctggg gcagcatgtt ggttcgttct cacgacgata
     1921 cacgcaggcg ctgcgcggcg aaatgtcct
//
LOCUS       DASRPQ010000683         1692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2899501, whole genome shotgun sequence.
ACCESSION   DASRPQ010000683 DASRPQ010000000
VERSION     DASRPQ010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2899501"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1692)
                     /locus_tag="VFD73_07915"
     CDS             complement(<1..>1692)
                     /locus_tag="VFD73_07915"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HZI73944.1"
                     /translation="SSGDPGASASILIRGQTTISAGSGISGADAQPLIIVDGVPIDNS
                     ISYNNPSNGAINSSAAPSNRAIDINPNDIENVEVLKGAASGAIYGSRAGQGVILITTK
                     KGHAGPTKYSFRSSASFDDVAKLPELQTKYGLGSGGVSPSCLSGGTPNCFVAFPQAVS
                     WGPALASGTPTFNHAGEMFQTGHTLDNALTISGGNDRTTFFLSAGATNQRGSITGNND
                     KFDRFSIRFNGSHRVFDNLKVGANVAYIDGTGGFITSRNSTDGLLLGAWRSPPEFNNL
                     PYLDPVTGLQRSYRFPNPAAGSEQTGRGYDNPFFVANESFNKSEVGRTFGGINLEYAA
                     NSWLSFNYTLGGDYSNDERTQGWPWSNSNTTIVGINGVGGVNAGYIRSFQIDHNLTAT
                     ARYKINPKWSGAVTVGQNLNSNKYQSRQTLGTGLIAQQPFNLGNTSSQLPPYDYQQTV
                     RLESYFAQVSADLWDQLFLTAAIRNDGASTFGADTRHNWYPKASAAWTFFRSAEGTDR
                     FLTFGKVRAAYGQSGTQPAPYLLSSVLFGGWGGTDGGWGPAISTQQNGVGGLIST"
BASE COUNT          286 a          493 c          581 g          332 t
ORIGIN      
        1 aggtggagat cagtccgccc accccgttct gctgggtcga aatggcggga ccccagccgc
       61 cgtcggtgcc gccccagccg ccgaacagca cgctggagag gaggtacgga gcgggctggg
      121 ttccgctctg gccgtacgcc gcgcgcactt tcccgaaggt gaggaagcga tcggtccctt
      181 cggcactgcg gaagaaggtc caggcggcac tggccttggg ataccagttg tgccgggtgt
      241 ccgcgccgaa ggtggaggcg ccgtcgttcc ggattgccgc tgtgaggaag agctggtccc
      301 acagatcggc actcacctgc gcgaagtacg actccagccg gacggtctgc tggtagtcgt
      361 aggggggcag ctgagatgag gtattcccca gattgaacgg ctgctgcgcg atgagcccgg
      421 tgcccagggt ctggcggctc tgatacttgt tcgagttgag gttctgcccc accgtgaccg
      481 cgccactcca tttcggattg atcttgtagc gtgcggtcgc ggtcagattg tgatcgatct
      541 ggaacgaccg gatgtagccg gcgttgactc cgccaacgcc gttgatcccg acgatcgtgg
      601 tattggagtt ggaccagggc caaccctggg tccgctcgtc gttggaatag tcaccgccga
      661 gagtgtagtt gaagctgagc cacgagttgg cggcgtactc gaggttgatg ccgccgaagg
      721 tccgtcccac ctcggacttg ttgaacgact cattcgctac aaagaaagga ttgtcgtatc
      781 cccgcccggt ctgttccgag ccggccgcgg gattggggaa ccggtagctg cgctgcagac
      841 cggtgaccgg atccagataa ggcaggttgt tgaactccgg tggcgaccgc caggcaccga
      901 gcagcaatcc gtcggtgctg ttccggctgg tgatgaagcc gccggtccca tcgatatacg
      961 cgacgttggc gccgaccttg aggttgtcga agacccggtg ggagccgttg aaccggatgg
     1021 agaagcggtc gaacttgtcg ttgttaccgg tgatcgagcc ccgctggttg gttgcgccgg
     1081 cggagagaaa gaaggtggtt cgatcgtttc cgcccgagat ggtcagggcg ttgtccagtg
     1141 tatggccggt ctgaaacatc tcgccggcat gattgaacgt cggggttccg gaagcgagcg
     1201 ccggccccca gctcaccgcc tgcggaaagg ccacgaagca gttgggcgtc ccacccgaga
     1261 gacaggacgg tgatacgcct ccgctgccca gaccgtactt ggtctgcagc tcaggcagct
     1321 tcgccacgtc atcaaacgaa gccgagctgc ggaaggaata cttggtcgga ccggcgtgcc
     1381 ccttcttggt ggtgatcagg atgacaccct gccccgcccg tgagccatag atcgccccgg
     1441 acgccgcacc cttcagcact tccacgttct cgatgtcgtt cggattgatg tcgatggcgc
     1501 ggttggatgg cgccgcgctg gagttgatgg ccccgttgct cgggttgttg tagctgattg
     1561 agttgtcgat gggaactccg tcgacgatga tcagaggctg ggcatcggcg ccgctgatgc
     1621 cgcttccggc gctgatggtg gtctggcccc ggatcaggat gctggccgag gcgccgggat
     1681 cacccgagct gg
//
LOCUS       DASRPQ010000684         4599 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1018427, whole genome shotgun sequence.
ACCESSION   DASRPQ010000684 DASRPQ010000000
VERSION     DASRPQ010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4599
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1018427"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..296
                     /locus_tag="VFD73_07920"
     CDS             <1..296
                     /locus_tag="VFD73_07920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73945.1"
                     /translation="GGPDVVLLDDGVFSLYSAIADLATPAGKPLTAVFPRTARRASFV
                     ARREAGSDGRTRVTLSGDLRGVLVTDGRGQLVRLELSDAGIVVTRAPDQTTAQ"
     gene            376..1902
                     /locus_tag="VFD73_07925"
     CDS             376..1902
                     /locus_tag="VFD73_07925"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HZI73946.1"
                     /translation="MNRWCRLLALACVFPARASGQDSTAVLSQGVPVSLSLDEALRQA
                     RAHSPTYRQALNNAAPARWGVRNAYGSLLPSVTASTDVGYTGSGQSSLGGGLTFSTSP
                     FLTSGYSLGLDWQLSGRALMAPAQQKALQRATDEDISGAGVTLTSEISTQYLNTLQAS
                     AQVQVARQQVKRNEDFLALARARHQVGQATLLDVRQAEVTKAGSDVALLRAVQAQNEA
                     KLDLLRRMGVEPPVAIEQIVLSDSFPVSAPTVKLDSLLALAEQHNPLLRSLRAREHAA
                     DLDVRAAKSDFLPSLSFRAGWSGFTQQYTNEGLLLQQTLTDAQGKAADCQFDNSVKSA
                     LSLGGQVPNCYASNGLVDGGSALLDPVSQQIRHQNDVFPFRYTGQPFGANLSLSLPIF
                     TGFSRSLRLSQARAQQEDADEDIRARRLAVRSDVQARYLALHTAYQAIAVQASSRDAA
                     RDQLRLAQERYRVGAGSALELSDAQNSVQKAEGDYITAVYDYHKAIAALEAAVGGPLR
                     "
     gene            1915..3198
                     /locus_tag="VFD73_07930"
     CDS             1915..3198
                     /locus_tag="VFD73_07930"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HZI73947.1"
                     /translation="MSRRSKVWLGVIIAVLLTGGVVGFRIHQKRHAATEVKLERVARR
                     DLVSSVTASGKIEAKTSVDISADITGRIIDIAVREGDVVKRGQFLLQIDPAQYQAAVA
                     RAEGVVASTQATLLQTKATRDQAQRAWDRAQQLTKMGDNLIAPETAEQAHTAFDVAEA
                     NYQSTKAQLEQSRASLQEAKDNLAKTRLTAPINGRVVRLAVEEGEVAVPGTFSRETGL
                     LMTIADLSVILAKVQVDETDVVRLSQNDSVEVTIDAYRDTTFWGRVTKISHSAKLTPT
                     ETASGSTDRAVDFDVEVTLKDPPPDIRPDLSCTARIVTDTRRHVLSVPIIALTVRNHE
                     KIPNEIEGAPVVDTLRERFKKKEAEGVFVVRNGVATFRPVRTGIAGDEYFEVVDGIRE
                     GETIVAGTYQAIRDLKDSAKVRQVDTTKTKNSQVS"
     gene            3198..4439
                     /locus_tag="VFD73_07935"
     CDS             3198..4439
                     /locus_tag="VFD73_07935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI73948.1"
                     /translation="MRLWEAIRLALRTLRVQKLKSFFSLIGVLIGVTFLIAVVSIVQG
                     MNRYMVDRFANTLVGANTFELRQRPKITTGNVPEDVWRSWQRRPRITYEDAEYVRERI
                     RTPATFAKFCEDRVAVHYGTKVAKDVDLMGTEESYFDMKHYEITAGRAFTAQEVWTGL
                     PVLVIGSEVAQKLLAGVDPIGKQVIIGGLPYRVIGVVAKQGTLFGISLDKFAMMPFTA
                     QGRRLICPLNVLDALIVQTADPTTMLSAQAEAEALMRSRRQLKPWQENNFTFQTAEGA
                     LGSWQKISRILFIALPGLVAISLVVGGIVIMNIMLMAVSERTREIGILKALGARRRDI
                     LAQFVVESATLSSIGALLGIGVGIALAFGVKALTPLPAAVAPWSIGVAVILGVSVGIA
                     AGVYPATRASRLDPIAALRAE"
BASE COUNT          885 a         1446 c         1434 g          834 t
ORIGIN      
        1 ctggcggacc tgacgttgtg ctgctcgacg acggagtctt ttccttgtat tccgctattg
       61 cggacctggc gactcccgcc ggcaagccac ttaccgcggt cttccctcgg actgcgcggc
      121 gtgcctcatt cgtcgctcgt agagaagctg ggtcggatgg acgcacccgg gtgaccctca
      181 gcggcgatct tcggggtgtc ctcgtgaccg atggaagagg ccagctggtc cggctggaac
      241 tttccgacgc tggaatcgtt gtcacccgcg cccccgatca gaccacagct caataaccgc
      301 cttgtcgcaa gttgaaacct gcgcggtgat gcccgcgtat tgccgcggtc acaattcctg
      361 caaagggccc ctgccatgaa tcgttggtgt cgtctgctcg cgctcgcctg tgtgttcccg
      421 gcccgagcga gcgggcagga cagcaccgca gtgctctctc aaggtgttcc agtcagcttg
      481 tcgctggatg aagccttacg acaggcgcga gcacacagtc cgacataccg tcaggcgctg
      541 aacaatgcgg cgcccgcgcg gtggggagtt cgcaacgcct acggcagctt gcttccctct
      601 gtcactgcct cgaccgatgt gggatacacc gggtccggcc aatcgagcct tgggggcggc
      661 ctgacctttt cgacttctcc cttcctcacc tcgggctaca gtctgggcct cgactggcag
      721 ttgagcggtc gcgcgctgat ggccccagcg cagcagaagg cactgcagcg agccaccgat
      781 gaggacatca gtggggccgg cgtcaccctc acctcggaaa tctccactca gtatctcaat
      841 acgctgcagg catccgccca ggtccaagtg gctcggcagc aggtcaagcg gaacgaggac
      901 ttcctcgccc ttgcccgagc gcgccaccag gtgggacagg ccaccttgct cgatgtccgg
      961 caagccgaag tcaccaaggc agggtcagac gtcgccctgc tccgagcggt gcaggcgcaa
     1021 aacgaagcca agctcgacct cctccggcgc atgggagtgg aaccgccggt cgctatcgag
     1081 cagatcgtgc tctctgattc tttcccggtc agcgcgccga ccgtcaagct ggatagcctt
     1141 ctcgccttgg cggaacagca taacccgctg cttcggtcac tgcgggcacg ggagcatgct
     1201 gccgatctgg acgtgcgcgc agccaagtcc gactttctgc cttcgctttc cttccgagcc
     1261 ggctggagcg gctttactca gcagtacacc aacgaaggcc tactgctgca gcagactctt
     1321 accgatgcgc agggcaaagc cgcggattgc cagttcgaca attccgttaa atccgcgctt
     1381 tccctcggcg gccaagtacc caactgctat gcctcgaatg gcctggtgga tggagggtca
     1441 gcgttgttgg atccggtctc ccaacagatc cgtcatcaga acgacgtctt tccctttcga
     1501 tataccggtc agccgtttgg tgccaatcta agtctgtcac ttccgatctt taccgggttc
     1561 agccgttcgc tccgtctgtc ccaggcccgc gcccagcagg aagacgcgga tgaagacatc
     1621 cgcgcacgcc gactggcagt caggagtgac gtacaggccc ggtatctcgc gctgcacacc
     1681 gcctatcagg cgatcgctgt ccaagcaagc agccgagacg ccgcccgcga ccagcttcgc
     1741 ttggcgcagg agcgctatcg tgtgggtgcc gggtcggcgc tcgagttgtc cgatgcgcag
     1801 aactcagtgc aaaaggccga gggcgattac atcaccgcgg tctacgacta tcacaaagcc
     1861 atcgcagcgc tggaagccgc agtcggcggc cctctccgct aacgaggaac ggacatgtcg
     1921 cgcaggtcaa aggtgtggct cggggtaatc atcgcggtgc tgctgaccgg cggcgtggtc
     1981 ggattccgga ttcatcaaaa gcgtcacgca gccactgagg tgaagctgga acgagttgcc
     2041 cggcgtgacc tggtgagctc ggtgacggcc agcggaaaga tcgaggccaa gacgtcggtg
     2101 gacatcagcg ccgatatcac cggccggatc atcgatatcg ccgtgcgcga gggagacgtg
     2161 gtgaaacgag ggcagttcct gctgcagatc gatccggcgc agtaccaggc cgcggtggcc
     2221 cgagcagagg gtgtggtggc ctcgacccag gccaccctgc tccagaccaa ggcaacccgc
     2281 gatcaggcgc aacgggcatg ggatcgggcc cagcagctga ccaaaatggg agacaacctg
     2341 attgcccccg agacggcgga gcaggcgcac actgcgttcg acgtggcaga ggcaaactac
     2401 caatcgacca aagcgcagct ggagcaatcc cgggcgagcc tgcaggaggc caaggacaat
     2461 ctggcgaaga cccggctgac tgcgccgatc aacggaagag tggtgcggct ggcagtcgaa
     2521 gaaggagaag tggccgtccc cggtacgttc tcccgggaga ccggcttgct gatgacgatc
     2581 gccgatctgt cagtgattct ggccaaggtg caggtcgatg agaccgatgt cgtccgactc
     2641 agtcagaacg actccgtcga ggtcaccatc gacgcttacc gcgataccac gttctggggc
     2701 cgggtcacca agatcagcca cagcgcaaag ctcactccca cggagacggc ttccggttcc
     2761 accgaccggg cggtggactt cgatgtcgag gttacgctga aagaccctcc gccagatatt
     2821 cgcccggacc tcagttgtac cgctcgcatc gtcacggaca cgcggcggca tgttctcagc
     2881 gttccgatta tcgcgctgac agtgcggaat cacgagaaga tccccaatga gatcgaaggg
     2941 gccccggtgg tcgacaccct gcgggagcgg ttcaagaaga aggaggccga aggggtgttc
     3001 gtcgtacgca acggcgtcgc caccttccgc ccagtccgaa ccgggattgc cggcgatgaa
     3061 tatttcgagg tagtagatgg tatccgcgag ggtgagacga tcgtggccgg cacgtatcag
     3121 gccatccgcg acctcaagga cagcgcgaaa gtccgccagg tcgataccac aaagaccaag
     3181 aacagccagg tctcctagtg cggctgtggg aggccatccg gctggcgttg cgcacgctcc
     3241 gagtccagaa gctcaagagc ttcttctcgc tgatcggagt cctgatcgga gtcacctttc
     3301 tcatcgccgt cgtctccatc gtgcagggaa tgaaccgcta catggtggac cgattcgcca
     3361 acaccctggt gggggcgaac accttcgagc tgcggcaacg acccaagatc accaccggca
     3421 acgtcccgga agacgtctgg cgatcctggc agcgtcggcc gcgaatcacc tacgaggacg
     3481 ccgaatacgt tcgtgaacgg atccgaaccc cggcaacatt cgccaagttt tgcgaagacc
     3541 gggtggccgt gcattacgga accaaagtgg ccaaagacgt cgatctgatg ggtaccgaag
     3601 agagctactt cgacatgaag cactacgaga tcacggccgg ccgtgccttc actgcacagg
     3661 aggtctggac cggcctgccc gtcctcgtca tcggcagtga agtggcgcag aagctgctcg
     3721 ccggcgtcga tccgattgga aaacaggtga tcatcggtgg gctgccctac cgcgtgatag
     3781 gagtggtggc aaagcagggg accctgttcg gtatctcgct ggacaagttt gccatgatgc
     3841 ccttcaccgc ccagggtcgg cggctgatct gtccgctcaa cgtcctggac gcgctgatcg
     3901 tacagaccgc ggaccccacg acgatgctga gcgctcaagc agaagctgaa gcgctcatgc
     3961 ggagccgccg gcaattgaag ccctggcaag agaacaattt caccttccag accgcggagg
     4021 gtgctctggg cagctggcag aagatctcgc gaattctctt tatcgccttg ccaggactcg
     4081 tcgccatctc gctggtggtc ggcggcattg tgatcatgaa catcatgctg atggcggtga
     4141 gcgaacggac ccgagagatc ggaattctca aagcattggg tgcccggcgg cgagatatcc
     4201 tggctcagtt cgtggtcgag tccgccacct tgtcttcgat cggggcgctg ctgggaatcg
     4261 gcgtcggcat cgctctggcg ttcggcgtca aggcgctgac gccgctgcct gcagccgttg
     4321 ccccctggtc catcggcgtc gccgtgatcc tgggagtgag cgtcggcatt gccgccggcg
     4381 tctatcctgc gacccgggcg tcgcggctcg acccgattgc cgcgttgagg gcagaatgac
     4441 gtcccgccga gccagtgtcc tctcccgaat ggtggaaggc tccgccatcg cgctagactc
     4501 gatccgctcc aacaaagtcc gggccgggct cacgattctg ggcgtggcca ttggcgtgac
     4561 ggtggtgatc gccatggcct cggccattac gggcatcaa
//
LOCUS       DASRPQ010000685         1064 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1966624, whole genome shotgun sequence.
ACCESSION   DASRPQ010000685 DASRPQ010000000
VERSION     DASRPQ010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1966624"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..226)
                     /locus_tag="VFD73_07940"
     CDS             complement(<1..226)
                     /locus_tag="VFD73_07940"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73949.1"
                     /translation="MTEAMQCYEAAIEIATATGERGVLAEALRRLGVVHHHRDLPAAA
                     RELCQKSYDTALAIGNSVLAAEALNALAGFD"
     gene            complement(341..895)
                     /locus_tag="VFD73_07945"
     CDS             complement(341..895)
                     /locus_tag="VFD73_07945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73950.1"
                     /translation="MNMLRRLSPIGLALLLLVGVSCTAADPTGPVATDQQAAPSLGII
                     GDLTNSVVGTLGSVTDLLLCSPQPYASTTRTVGPDGGLITVGTHRLFIPAGALPSDVS
                     ITAEQMPGSTNSIRFSPEGLHFQQPAALTMTYDNCALVLLQKKIAYTDENLKVLQVLR
                     SLDLFRTKTVTAPIDHFSRYAVAY"
BASE COUNT          198 a          327 c          358 g          181 t
ORIGIN      
        1 catcgaatcc ggccaaagcg ttgagcgcct cagcggcaag caccgagttc ccgatcgcca
       61 gtgcggtatc gtagctcttc tggcagagct cccgagccgc cgccggcaga tcgcgatggt
      121 ggtgtaccac ccccaggcgc cggagcgcct ctgccagcac gccccgctcg ccggtggcag
      181 tggcaatctc gatggcggct tcatagcact gcatcgcctc ggtcatcgag ccggatcgct
      241 cgtggcttcg agcctggcga atgaaatcag ccgcgctgga accctcgctc gattgagggc
      301 tctgcgcggc tgggcgctgc agattctccg ggctcactgg ctagtacgcc accgcgtagc
      361 gggaaaagtg atcgatcggc gccgtgaccg tcttggtccg gaagagatcg agcgagcgca
      421 gcacctggag aacttttagg ttctcgtcgg tgtacgcgat cttcttctga agcagcacca
      481 gcgcgcagtt gtcgtacgtc atggtgagcg cggcgggctg ctggaaatgc agtccctcgg
      541 ggctgaacct gatcgaattg gtcgaacccg gcatctgctc cgcggtgatg cttacgtcgc
      601 tggggagcgc accggcagga atgaacagcc ggtgggtgcc gacggtgatg agcccgccgt
      661 cgggaccgac agtccgggtg gtagaggcgt aaggctgcgg cgaacacagc aacagatcgg
      721 tcaccgaccc cagagtcccc accacgctgt tggtcagatc tccgatgatg ccgagagaag
      781 gcgcggcttg ctggtcggta gcgaccggac ccgtaggatc cgcagcggtg cagctcaccc
      841 ccacgaggag cagcagagcc aaaccaatcg gggatagtct gcgaagcatg ttcatctgct
      901 actccggcta ggggtgagcg tcgagcgacg ataccgcggc cgcaacggcg accgccgaac
      961 gttgccgagt cgtctgccgc cgcgggagcg ggttgacaat ctcagaactg ttcggtgcgc
     1021 ggaacgtgat gtcaggcagc agcttagcag gcaaggagca tgcc
//
LOCUS       DASRPQ010000686         4612 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_395447, whole genome shotgun sequence.
ACCESSION   DASRPQ010000686 DASRPQ010000000
VERSION     DASRPQ010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4612
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_395447"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1071
                     /locus_tag="VFD73_07950"
     CDS             <1..1071
                     /locus_tag="VFD73_07950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73951.1"
                     /translation="LPIAILIASMWATMTSLYTLPFRSGRGYFLTALLMSWWDVGRMA
                     WFYWAGMVRFVFVLIGWIGSAIKAFVRLVWNAIKGALNSPFAVLDWTSRRYFKPGVPW
                     LAFMLLILWSAIEATIFTFTLRPTMNELLADLTGFEPNPIMLTALLYIFLFFLVGGSF
                     ACVQALNDAIKTKQYGTIISMTIIEIVVAGFEVLFLYRELVDAITPWMAQQGFNLGIV
                     GTLALAFAGWLGVRGMTWFLFGRYGTPALIAVLARETLSHSSGADLAPPKQPEFWKAP
                     IAALKAEVDWFKKEAREMFELLTLPVLQLLAAGFNFWLVVLLGRPHFTLPFRSLEEVQ
                     ASTPLSIERKQAARTTATQGAV"
     gene            1068..1814
                     /locus_tag="VFD73_07955"
     CDS             1068..1814
                     /locus_tag="VFD73_07955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73952.1"
                     /translation="MRPKLIPFLLAGLVLGCQPPKDAPPPKSTLVIGLDVSGSFRKGG
                     HFEDAVDFAALYIYAHMKGYGDLRRPSDIFIGTMGGQRPGEAKTFHPIQDLTGKSPSQ
                     IAASLRAWFPEDDPITDYNAFFQRVAVHVQRQNLGLAPLSIVMFSDGVPDIPGAKGDE
                     LYRRINMEPLEYLSRSVTVRLLYASPKVAQRWEQLVPRKRVRLWTQDHEVMEGWRRHF
                     VSTARPEQQDSLWSWMQNVVDFRVRRGKVI"
     gene            1946..2098
                     /locus_tag="VFD73_07960"
     CDS             1946..2098
                     /locus_tag="VFD73_07960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73953.1"
                     /translation="MAEPSPQRSLKRVWIWILILIVVVWIVYALTGGTKTPSTSTTGG
                     APASQQ"
     gene            complement(2129..2593)
                     /locus_tag="VFD73_07965"
     CDS             complement(2129..2593)
                     /locus_tag="VFD73_07965"
                     /inference="COORDINATES: protein motif:HMM:NF024917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI73954.1"
                     /translation="MTAAFHIRRASPADAKILAQLRYEFRVELDPPSEPAHIFRERCA
                     EWMSEQLDRDGRWSCWLAVLGETPVGSLWMQLIEKLPNPNGHRDYHGYISSVYVVPEF
                     RNAGLGSALLQTCISEAETFGVDALFLWPSARSRPLYARHGFVVREDLLERR"
     gene            2695..3843
                     /locus_tag="VFD73_07970"
     CDS             2695..3843
                     /locus_tag="VFD73_07970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73955.1"
                     /translation="MPAWLEQTLGVALFLFILVDVFLTVLYARIGSGLLSYQLSRWIW
                     QFFRRVSRLFRRHRAKALSFCGPIILVMVLLSWALLLTLGEALIIHPRLGTGVVSTTG
                     ATPKDFVSALYAGGSSMSIVGANNFAPANSGFRALFVLDSLFGMSVISLTLTYLMQVY
                     NALYRRNAFGYSVHLASAETGDAAELLAGIGPQGEYRSGYTSLAELSMQMTGLKESHH
                     FYPVLFYFRFPDPAYAISRITLVLLDMVTLLKSALDDEHYAWLKESAPVTQLWRGCLI
                     LTTNLAETFLPDDLPSPNEPDYGTRERWRGRYHAAVRRLIQAGVPVTGDLSAGAENYI
                     ALRAHWQPHIENLAPALGFSMEDVDPAGTDPGSADRRPDFRSRLHTVG"
     gene            3990..4598
                     /locus_tag="VFD73_07975"
     CDS             3990..4598
                     /locus_tag="VFD73_07975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73956.1"
                     /translation="MRRTLSFMILGTTLWATSSLAQTLPSRPGFFTDPVLAIDRSYGE
                     LVLGRTTLRSAMLIFATELQDTTHSRASTDSEPPVAPRARYQLTPGRGHYTLYFDKNE
                     RLVAAMADRQEFPRPLRRDELVAQYATLRPRSRPDMTSPGAVEDVEAPLGPCLSMQAS
                     VWTAGSGSSDRLRAGTVLSFGYRYTCPTKAAELRADLPDVLH"
BASE COUNT          774 a         1479 c         1391 g          968 t
ORIGIN      
        1 ctgccgatcg cgatcctcat cgccagcatg tgggctacga tgacgtcgct ctataccctg
       61 ccgttccgtt ccggccgagg ctacttcctg actgcgctct tgatgtcgtg gtgggatgtg
      121 ggccggatgg cgtggttcta ctgggccgga atggtacggt tcgtcttcgt attgatcggc
      181 tggatcggca gtgcaatcaa ggcgttcgtc cgcctggtgt ggaacgcgat caagggcgcg
      241 ctgaactccc cgttcgccgt cttggactgg acatcgcgac gatacttcaa gcccggtgtg
      301 ccgtggctcg cgttcatgct gctcattctg tggtcggcga tcgaggcgac gatcttcacc
      361 ttcacgctgc gcccgaccat gaatgagctg ctggccgacc tgaccgggtt cgagcccaat
      421 ccgatcatgc tcacggcgct gctctacatc tttctgttct ttctggtggg cggaagcttt
      481 gcctgcgtcc aggcgctgaa tgacgccatc aagaccaagc agtacggcac catcatttcg
      541 atgaccatca tcgagatcgt ggtcgccggc ttcgaagtgt tgtttctcta tcgtgagctg
      601 gtggatgcga tcacgccctg gatggcgcag caggggttca atctggggat cgtcgggacc
      661 ctggcgctgg ccttcgccgg ttggctgggc gtgcgcggca tgacctggtt cctcttcggc
      721 cggtatggca ctccggcgct gattgcggta ctggcgcgcg aaaccctgag ccacagcagt
      781 ggcgctgatc tggccccccc gaagcagccg gaattctgga aggcacctat agcggcactc
      841 aaagccgagg tggattggtt caagaaggaa gctcgcgaga tgttcgagct gctcaccctg
      901 ccggtgctgc agctgctggc cgcaggcttc aacttctggc tggtggtgct gctgggacgg
      961 ccgcacttca ccttaccctt ccgctcattg gaggaagtgc aggcctcgac tccgctatcc
     1021 attgagcgca agcaggcggc ccggaccacc gctactcagg gggcggtatg agaccgaaac
     1081 tgattccatt cttgttggcg gggctggtcc tgggatgtca gccgcccaag gatgccccgc
     1141 cgcccaagtc gacgctggtc atcggtctcg atgtgtccgg ctcgttccgc aagggcggtc
     1201 acttcgaaga cgcggtcgac tttgccgcgc tctacatcta cgcccacatg aagggatacg
     1261 gggacctgcg gcgccccagc gacatcttca tcggcaccat gggcggacag cggcccggcg
     1321 aagccaagac cttccacccg attcaggatc tgacgggcaa gtcgccatcg cagattgccg
     1381 cgagtcttcg ggcctggttt cccgaggatg atccgatcac cgactacaat gccttctttc
     1441 agcgcgtcgc cgtgcatgtc cagcgtcaga atctcggcct tgcgccgctg agcatcgtga
     1501 tgttctcgga cggggtgcct gacattccag gcgccaaggg cgatgagctc tatcgccgca
     1561 tcaacatgga gccgctggag tatctctcgc ggagcgtcac cgtgcggctg ctctacgcct
     1621 cacccaaggt cgcgcagcgc tgggaacagc tggttcctcg caagcgggta cggctttgga
     1681 cccaggacca cgaggtgatg gaaggctggc gtcgccactt cgtgtcgacc gcgcggccgg
     1741 agcagcagga ctcgctctgg tcatggatgc aaaatgtcgt ggacttccgg gtacggcggg
     1801 gcaaagtgat ctaacggtcc cgccgcccaa ttcacgaaga cagcgccggt cctgtggccg
     1861 gcgctgtttg tttccctcct cgccagtccg cattttcgtt acactacctc cacacggcgg
     1921 cttcactcac tcccaggagc ttcgtatggc tgaaccctcc ccccagcgca gtctgaaacg
     1981 agtgtggatc tggatcctga ttctgatcgt cgtggtgtgg attgtgtacg ccttgaccgg
     2041 tgggacaaag acaccgtcaa cctcgaccac gggcggcgcg cccgcctctc agcagtgact
     2101 cactcgcggg gctagggact cgggaggttc agcgccgctc cagaagatcc tcccgtacca
     2161 cgaagccgtg ccgagcatac agtggacggc tccgagcgct gggccagaga aaaagggcat
     2221 ccacgccgaa cgtttcggct tcgctgatgc aagtctgcag cagtgcagag ccaaggcccg
     2281 cgttccggaa ctcaggcacg acgtacacgc tgctgatata gccgtggtaa tcccggtggc
     2341 cgtttggatt gggcagcttc tcgatcagct gcatccagag ggagccgacc ggagtctcgc
     2401 ccaggaccgc cagccagcag ctccagcgtc cgtcccgatc cagctgctcg gacatccatt
     2461 ccgcacagcg ttcccgaaag atgtgagccg gctcgcttgg tggatcgagc tccacccgga
     2521 actcgtagcg gagttgggcg aggatcttgg catcggccgg gctggcccgg cggatatgaa
     2581 aggcagcggt catccctggc ttcgtcgccc tcccgcggcg tccttccact tggcaccggc
     2641 ctcaggcatc ttgaaaatgt tcaacagttg ctcctcctgc ctggacgtgt cctggtgcct
     2701 gcctggctgg aacagacact cggtgtcgca cttttcctct tcatcctggt cgacgtcttt
     2761 ctgaccgttc tctatgccag gatcgggtca ggcctgctga gctaccagct cagccgctgg
     2821 atctggcagt tctttcgccg agtctcccgt ctgttccgcc ggcaccgcgc caaagcgctc
     2881 tcgttctgcg gacccatcat tctggtcatg gtgctcttga gctgggccct gctgctgacg
     2941 ctgggtgagg cgctgatcat ccacccccgc ctcgggaccg gagtcgtgtc aactacgggc
     3001 gccaccccca aggactttgt cagtgcgttg tatgccggcg gcagcagcat gtccatagtt
     3061 ggcgccaaca actttgcccc cgccaactcg ggcttcagag ccttgttcgt gctggattct
     3121 cttttcggca tgtccgtcat atctctgacg ctgacgtatc tgatgcaagt ctacaatgcg
     3181 ctgtatcggc ggaatgcgtt cggctacagc gtgcatcttg catcggctga gacgggtgat
     3241 gcggcggagc tcctggcggg aatcgggccc caaggtgagt accggagcgg ctacaccagt
     3301 ctcgcggaac tctcgatgca gatgaccggg ctcaaggaat cccatcactt ctatccggtc
     3361 ttgttctact tccggttccc cgatccggcc tacgcgattt cccgcatcac cctcgtgctg
     3421 ctcgatatgg tcacactcct caagagtgcc ctggacgatg agcactatgc gtggttgaag
     3481 gagtccgcac ccgttaccca gctctggcgg gggtgcctga ttctcaccac caacttggcg
     3541 gagacttttc tgcccgatga tcttccgtcg ccgaacgagc ccgattacgg gaccagggag
     3601 cgctggcgcg ggcgctacca tgcggcggtg cggcgattga tccaggccgg cgtaccggtg
     3661 accggagact tgagcgctgg agcagagaac tacattgcct tgcgggcaca ttggcaacct
     3721 cacatcgaaa acctggcacc ggccctgggc ttcagcatgg aggacgtcga cccggcgggc
     3781 accgacccag gatccgccga tcggcggccc gacttccgca gccgacttca cacggttggc
     3841 tagatagctg tttgcaaact cagaggcgct gttctctgca acttccggca ctcccgacga
     3901 aacaccctct catccggcca ctttgcactc ccggttcccc cggcgcgtga gttgcggtag
     3961 cgggcagacc ttccgctttt cgagggtgaa tgcgccgcac gctctcattc atgattctgg
     4021 gcaccacgct gtgggcaact tcctctctgg cccagacgct accttcccgg cccggtttct
     4081 tcaccgaccc ggtcttggcc atcgaccggt cttacggtga gctggtcctg ggccggacga
     4141 cattgcgttc agccatgctg atctttgcaa cggagctcca ggatacaact cattctcgtg
     4201 cgagtacgga cagcgagccg ccggtggccc cgagggcccg gtatcaactg acgccgggac
     4261 gtggacacta caccctctat ttcgataaga atgaacgact ggttgcggcg atggcggacc
     4321 ggcaggaatt cccccgtcct ctccggcgcg atgagctggt ggcgcagtac gccacgctca
     4381 gaccgcgctc acggcctgat atgacctcgc cgggagcggt agaggacgtc gaggctcctt
     4441 tgggaccatg tctttcgatg caagcgtcgg tctggaccgc gggatctggg tcgagcgacc
     4501 gacttcgtgc cggaacggtt ctcagcttcg gctatcggta tacctgcccg acgaaagcgg
     4561 cggagctccg cgccgatctc cccgacgtcc tccactagtc tcctcactcc tc
//
LOCUS       DASRPQ010000687         1460 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1018909, whole genome shotgun sequence.
ACCESSION   DASRPQ010000687 DASRPQ010000000
VERSION     DASRPQ010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1460
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1018909"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..199)
                     /locus_tag="VFD73_07980"
     CDS             complement(<1..199)
                     /locus_tag="VFD73_07980"
                     /inference="COORDINATES: protein motif:HMM:NF014618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nuclease domain-containing protein"
                     /protein_id="HZI73957.1"
                     /translation="MVEMTVESVRINLATSQRVVILKDGQGDRYLFIWIATAEAYSIA
                     MELQGTASLRPLTHDLLKSVIA"
     gene            504..1124
                     /gene="lexA"
                     /locus_tag="VFD73_07985"
     CDS             504..1124
                     /gene="lexA"
                     /locus_tag="VFD73_07985"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: protein motif:HMM:TIGR00498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HZI73958.1"
                     /translation="MKTELSDPQRKIYQFIERYTHEYGRPPTNREIGNEVGIQSTGHV
                     DYHLTMLERKGYITRERRKSRAIRVLRPEHPQGMRIAGTIAAGAPLDIFTDSQQDTLD
                     LNTHAREYVLQVRGSSMIEDHIQDGDYVLVLPGTQIHDGDIIVATHKIANGDGGAATL
                     KRIYKETGRIRLQPANSEMGPIYVPADEWDDEWEVQGKVTAVYRRC"
BASE COUNT          292 a          496 c          416 g          256 t
ORIGIN      
        1 cggcgatcac cgacttcaat agatcgtgcg tcagtgggcg gagcgatgcc gtgccttgca
       61 attccatggc gatggagtac gcctcggcgg tagcgatcca gatgaacagg tagcggtcgc
      121 cctgcccatc tttcaagatc accacccgct ggctggtggc gaggttgatt cgcacactct
      181 cgaccgtcat ctccaccatg ggttcgctcc ctcctgcggt ggctgggtgg ggtcggcggc
      241 ggagtctgcc ggccccggga tggccgtatt gtacaccggg gccagtaaag ggcgcaaatg
      301 gcccggaccc gcaccaacgc cgcgttcccc gccctttcac cacccatcct ccacgtcccc
      361 acgcacgaat tttcgcattt cccgtcaatt agcgaacatt ggtccgttgg ggtcttgaca
      421 gaacaaatat ctgatagtac actgtagaac aagggtacaa tcgcctttta cccataacat
      481 tttcccgcag gaggacaccc ctcgtgaaga ccgagcttag cgatccacag cgcaaaatct
      541 accagttcat cgaacgctac acccatgagt acggccggcc gcccaccaac cgcgagatcg
      601 gcaatgaggt cggcatccag tccaccggcc acgtggacta ccacctcacc atgctcgagc
      661 gcaagggcta catcacccgc gagcgccgca agagccgcgc gatccgcgtc ctgcgccccg
      721 agcatcccca gggcatgcgc attgccggca ccatcgccgc cggcgccccg ctggacatct
      781 tcaccgacag ccagcaggac accctcgacc tcaacaccca tgcgcgcgag tacgtgctcc
      841 aggtgcgcgg cagctccatg atcgaggatc acatccagga cggcgattac gtcctggtgc
      901 tgcccggcac ccagatccac gacggcgaca tcatcgtcgc cacccacaag attgccaacg
      961 gcgacggcgg cgccgccaca ctcaagcgca tctacaagga gaccggccgc attcgcctgc
     1021 agcctgccaa ctccgagatg ggcccgatct acgttcccgc cgacgagtgg gacgatgagt
     1081 gggaggtcca gggcaaggtg acggcggtct accgccgctg ctaggcccac ggcaacatct
     1141 gaaccatctg acaacgcctc agaacatggt ccccgatggc ttgccaagtg cgcgggagcg
     1201 tggtagacac catgtggcga cagacgcatg atgagcgggc gagcgttgct ctcgtccgct
     1261 ctcgcgtggt ttcgcccgtt atgtcgccat gcgcgtgcac cagtggccca gacaggggga
     1321 cttcggttga gtggaataga acaggcgctc tttgacctca ttaaacagtg gtatctgacc
     1381 actggctacc tcggcatcgt gctggcgatg gcgcttgaaa gctgctgcgt gccgctcccc
     1441 agcgagatcg tcatgccgct
//
LOCUS       DASRPQ010000688         1021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_709565, whole genome shotgun sequence.
ACCESSION   DASRPQ010000688 DASRPQ010000000
VERSION     DASRPQ010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_709565"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..444
                     /locus_tag="VFD73_07990"
     CDS             <1..444
                     /locus_tag="VFD73_07990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HZI73959.1"
                     /translation="AAGLTQAGKAQLRDGRTGQPFEGEVTVGSIYMLKLSHLVDDKIH
                     ARSIGPYSLVTQQPLAGKAQFGGQRFGEMEVWALEAYGAAHVLQEMLTVKSDDVNGRS
                     KVYEAIVKGQNLPEPGIPESFNVLVKELQALGLKVTLGTTEAGDE"
     gene            448..>1021
                     /locus_tag="VFD73_07995"
     CDS             448..>1021
                     /locus_tag="VFD73_07995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HZI73960.1"
                     /translation="MIDFRSGREPKSSSFDYISIRIAAPEEIRGPRDTKERERLELQG
                     QRTWWSWGEVTKPETINYRSFKPEKDGLFCERIFGPVKDWECHCGKYKRIRYRGVICD
                     RCGVEVTLSKVRRERMGHIELSVPVAHIWFFKTLPSPMGNLINITLRDLERVIYYSSY
                     IVIEPGKQDVEQNQLLDEDEYLTLRTKAREE"
BASE COUNT          216 a          284 c          349 g          172 t
ORIGIN      
        1 gccgcgggtc tgactcaggc tggtaaggcg cagctccggg acggccgtac cggccagccc
       61 ttcgaaggcg aagtgaccgt tggctcgatc tacatgctga agctgagcca cttggtcgat
      121 gacaagatcc acgcccggtc gatcggaccg tactcgctgg tgacccagca gccgctggct
      181 ggtaaagccc agttcggcgg acagcggttc ggcgaaatgg aggtgtgggc actggaggcg
      241 tacggcgccg cccacgtgct gcaggagatg ctcacggtca agtcggacga cgtgaatggc
      301 cggagcaaag tgtatgaggc aattgtaaag ggacagaact tgcccgaacc cggtatcccc
      361 gaatcgttca acgtattggt gaaggaattg caggcgctcg gtctcaaggt caccctcggg
      421 accaccgaag cgggagatga atagatcatg attgactttc gtagcggtcg cgagcccaag
      481 agctcgagct tcgattacat cagcatccgc attgccgcac ccgaggagat ccgcgggccg
      541 cgggacacca aggagcgcga gcgcctggag ttgcaggggc agcgtacgtg gtggtcctgg
      601 ggtgaggtga ccaagccgga gaccatcaac taccggtcgt tcaagccgga gaaggatggc
      661 ctcttctgcg agcggatctt cggtccggtc aaggactggg agtgccattg cgggaagtac
      721 aagcggatcc gctatcgcgg cgtgatctgc gaccggtgcg gcgtcgaggt gacgctcagc
      781 aaggtgcggc gcgagcgtat gggccacatc gagctcagcg taccggtggc gcacatctgg
      841 ttcttcaaga cgctgcccag cccgatgggg aacctgatca acatcacgtt gcgcgacctc
      901 gagcgggtga tctactactc gagctacatc gtgatcgagc cgggcaaaca ggatgtggag
      961 cagaatcagc tgctggacga ggacgagtac ctgaccctcc gcaccaaggc gcgagaggag
     1021 g
//
LOCUS       DASRPQ010000689         1213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2900050, whole genome shotgun sequence.
ACCESSION   DASRPQ010000689 DASRPQ010000000
VERSION     DASRPQ010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2900050"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..775)
                     /locus_tag="VFD73_08000"
     rRNA            complement(<1..775)
                     /locus_tag="VFD73_08000"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          201 a          463 c          313 g          236 t
ORIGIN      
        1 tcctgtttgc tccccacgct gtcgcgcatc agcgtcagct actgcccagc aggccgcctt
       61 cgccaccggt gttcttccgg atctctacgc attccaccgc tacacccgga attccactcg
      121 cctctacagt gctccagcct ctcagtcggc acggccgatc cggggttgag ccccggactt
      181 tcaccgcacc cttaagaggc cgcctacgcg ccctttacgc ccagtgattc cggacaacgc
      241 tcgcaccctc cgtattaccg cggctgctgg cacggagtta gccggtgctt cctcacccgg
      301 taccgtcaga gcggactgat ccgcttgttc gtcccgggca acagtggttt acaccccgaa
      361 gggcgtcatc ccacacgcgg cgtcgctgcg tcagcctttc ggccattgcg caatattccc
      421 cactgctgcc tcccgtagga gtctgggccg tttctcagtc ccaatgtggc tggccatcct
      481 ctcagaccag ctacccgtcg tcgccttggt gggccgttac ccgcaccaac tagctgatag
      541 gccgcgaacc actcgatttg ccccggaggt ttcctcatca ggggactccc cccaatgagc
      601 gtatgcggta ttacccggcc gttgggccgg ctatccccca ggaatcggca ggtcgctcac
      661 gtgttacgca cccgttcgcc ggtgcctggc ccgttgccga gccaaacccc tcgacttgca
      721 tgtgttaagc acgccgccag cgttcgtcct gagccaggat caaactctcc aatagagaaa
      781 cttgatggct cctcgaaccg ctgccacacg ctgtcgcgtc tgacagcgcg tccgaatcac
      841 ttagaatgat caggtctgaa ctctcgccgt agcccctgtc aggccacggg tccacgagcc
      901 cgcctcgcac atcctgcgat ctcaacctcg attgtcaatc agcgtgtgcc gctccagcgg
      961 cagccttgca ttttaccacc ccgagtcggc cccgtcaagg ggggcgccga aatttcctcg
     1021 ctcacccgtt ccttgacgtc ccgcagcgca aatcgccgcg atgcctcgac ttcggcccgg
     1081 cgcacccggc gccgagaact cgaagtctaa ccggagccgg ccgcgagttc aacccccgcc
     1141 gcaccgctgc tccgccaggt cgatcgccgg ccgccccaga ccgaccctcg aggggcccgc
     1201 ctcaaagcag atc
//
LOCUS       DASRPQ010000690         1085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1019064, whole genome shotgun sequence.
ACCESSION   DASRPQ010000690 DASRPQ010000000
VERSION     DASRPQ010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1019064"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(528..692)
                     /locus_tag="VFD73_08005"
     CDS             complement(528..692)
                     /locus_tag="VFD73_08005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73961.1"
                     /translation="MPWPPGFYGEILGVLLAIAAEVASPKVVTAAPEIVCALRPGPGV
                     GAGLPPDDLG"
BASE COUNT          179 a          333 c          352 g          221 t
ORIGIN      
        1 gctgatctct agatcatggc aggaggatag gaccaggtca gtgcactcag ccgacgaaca
       61 gccgcctgcg gctgttgctg ggatctggct gtcatgcgag ttctgtttcc ggtggtcacg
      121 gcctgtcgcc aaaggcggtg cccgaagcag ccgtgatcga accatccatg cctggttgtc
      181 ctcactattt gtcacgctgg ctagcgcagc gtgtcgggca cggccggata atgaacgcgg
      241 tgagggcctt acgcagcgat atcgacctcc tatttgccca gcttcaaggt gtcattgact
      301 tatgttgctg caggtcagat gggcttctct atcacgagtt catggctgaa ggttgtgtta
      361 accggctgcg tggaaatccg cgctaatgcg tccgcgaacc gtcgttcggt acgcctgggt
      421 gagagggcgc ccggttggct atggccgcgc ataacgggcc tgatctgtgt gcggctacgc
      481 gctgcttgcc gttggtcgct gctgttgctg tcaccgttgc tgtcggctca gcccaggtca
      541 tcgggcggca agccggcccc gaccccaggt cccggtctta gtgcgcaaac gatctccggc
      601 gcggccgtca ccaccttcgg actggcaacc tctgccgcga tggcaaggag aactccaagg
      661 atctccccgt aaaaccccgg cggccagggc atgacgtacc tgccaggcgc agggcactgt
      721 cggcgtaccc agcgccaccg gggcagcgat cttgaccagc ctgaagcggc gcgcatccag
      781 cccgctgcgt tccagccatc gctgccggtg cccaagaccc ttgggccagc aggtcggcat
      841 ctctggtcgc caggcgtgca agtgcctgcc gtgttgcctc gttgacctcg gctctgaccc
      901 gattagccat gatcgcttcc tcttacgccc gggagggggc cggaccaagt aagcccgaaa
      961 gaggcaacgg gttggttagg cctgggactc ctacggctac ggcgagccgc cgatgctgat
     1021 ctgaccgggg tgttaatgta atggtcggtg ctatcggtgc agctagcgcg tgcgccggta
     1081 agggg
//
LOCUS       DASRPQ010000691         1677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4152928, whole genome shotgun sequence.
ACCESSION   DASRPQ010000691 DASRPQ010000000
VERSION     DASRPQ010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1677
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4152928"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..387
                     /locus_tag="VFD73_08010"
     CDS             <1..387
                     /locus_tag="VFD73_08010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73962.1"
                     /translation="FGQVVTALFDGLLGAGVAYYASFLLPARAEGEWLRARGLLAAAV
                     GVAFGGGLLWPRIVAGVVLALAAVWSVQRTHITLSPESTEDLESEGYLPFGVGLAAAA
                     GLVLLSGTMPMVRDVVLEYGRLLRMA"
     gene            384..1586
                     /locus_tag="VFD73_08015"
     CDS             384..1586
                     /locus_tag="VFD73_08015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73963.1"
                     /translation="MIRMLRLALLIAAVACRGEPPAKARPTSLTLLVDSLRPRVERAT
                     GLRFKSPPRSALRSKDQVRAYLMRKLDEELPRSKLAGMESAYRMFGLLPDTLDLRPLL
                     LELYTEQVAGYYDPDSATLFGVSGADPAQLRVVIAHEMVHALQGERMPLDSILHDKAN
                     NDRLAAAQSVLEGQATLAGMRALFPAGLDPTRDPDFWTEYADQIRSGQASMPVFAHAP
                     LVVKEALIFPYLAGAEFMHWWGQSQFRDSMPYGPRMPVSTEQILFPERYARHDVPVPL
                     EFTSGPDPVYEDVLGEGELRVLIAVLTGAKEVRPGEALGWGDDRYRVYQTPAGSALVW
                     YVIWDDKASGERFVTRYGSRLRATSRAGYKAALETVDVGGRPALRYVLAPEAWDGWRS
                     IPQVAISR"
BASE COUNT          267 a          522 c          562 g          326 t
ORIGIN      
        1 ttcggacagg ttgtgaccgc acttttcgat ggtttgctcg gcgccggtgt cgcgtactat
       61 gcctcattcc tcttgcccgc ccgggctgag ggagagtggc tcagagcgcg tggattgctc
      121 gccgccgcag ttggtgtcgc gtttggcgga ggattgctct ggccccgaat tgttgcgggc
      181 gtggtgctcg cccttgcggc cgtctggtct gtccagcgga cccacatcac cctctcgccg
      241 gaaagcacag aggacctcga gtcggaaggg tatctcccct tcggggtggg gctcgctgca
      301 gccgccggac tggtcctgct ctcggggacc atgccaatgg ttcgcgacgt cgtactggag
      361 tacggcagat tgttgaggat ggcgtgattc gaatgctccg gctcgccctc ctgattgccg
      421 ctgttgcctg tcggggagag ccgcccgcca aggcacgccc aaccagcttg accctgctgg
      481 tcgatagtct ccggcccagg gtggagcggg cgaccggtct ccgtttcaag tccccgcccc
      541 gatcggctct gcgcagcaag gaccaggtcc gtgcgtatct catgcgcaag ctcgatgagg
      601 agctgccccg ctcgaagctg gccggaatgg agagcgcgta tcgcatgttc ggcctcctgc
      661 ctgacaccct cgatctccgg cctctgctgc tcgagcttta taccgagcag gtggcaggct
      721 actacgatcc tgattctgcc accctgtttg gagtcagcgg tgccgatccg gcgcagctcc
      781 gggtggtgat cgcccatgag atggtgcacg cgctccaggg cgagcggatg ccgctcgatt
      841 ccatcctcca cgacaaggcg aacaacgacc ggctggcggc ggcgcaatcg gtgctcgaag
      901 ggcaggcgac gctggccggc atgagggcgc tcttcccggc ggggctggac ccgacccggg
      961 accctgattt ctggaccgag tacgccgatc agatccgctc gggccaagcc tccatgcccg
     1021 tcttcgccca cgctccgctg gtggtgaagg aagcattgat ctttccgtat ctcgctgggg
     1081 cggagttcat gcactggtgg gggcagtcgc agtttcgaga ctcgatgccg tacggcccca
     1141 gaatgccagt ttcgaccgag cagattctct ttcctgagcg gtacgcccgg cacgacgtcc
     1201 ccgtgccact cgagttcacc tcggggcccg atccggtcta tgaggatgtc ctgggagaag
     1261 gcgagctccg ggttctgatc gcggttctca ccggagcgaa ggaggtgcga ccgggagagg
     1321 cactgggttg gggtgacgac cgctaccggg tataccaaac ccctgcggga tcggcgctgg
     1381 tctggtatgt catctgggac gacaaggcgt ccggcgagcg attcgtcacg agatacggca
     1441 gccggcttcg ggctacatca cgcgcggggt acaaggccgc actcgaaacc gtcgacgtgg
     1501 gggggcgtcc cgccttgcgc tacgtgcttg cgccagaagc gtgggacggg tggcggagca
     1561 ttccccaggt tgcgattagc agatagggga acgagtagga acagcgcctg agatcattga
     1621 aacattcggg tgaccgtgta gatcagcagt cccaccagtc ctccgaccag cgtcccg
//
LOCUS       DASRPQ010000692         1121 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_710538, whole genome shotgun sequence.
ACCESSION   DASRPQ010000692 DASRPQ010000000
VERSION     DASRPQ010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_710538"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            210..689
                     /locus_tag="VFD73_08020"
     CDS             210..689
                     /locus_tag="VFD73_08020"
                     /inference="COORDINATES: protein motif:HMM:NF033564.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HZI73964.1"
                     /translation="MCAEAAPVDRHQEVDRHRHGRQEHRMLEVFKTEARLDPEWQSLI
                     ASVARISRLTWVKDTQSGLWRARKEVAYYACQMPLTAARFAQAVRSHWGIENRAHYVR
                     DQGFREDDSRIRRKPGMVARLRSFALNILRANGIGNVSQALYRNALSLDHLLAYPVT"
     gene            743..>1121
                     /locus_tag="VFD73_08025"
     CDS             743..>1121
                     /locus_tag="VFD73_08025"
                     /inference="COORDINATES: protein motif:HMM:NF019542.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73965.1"
                     /translation="MPSRTHVFRVRLWPKISRDIEIESSKSLYDLAAAIVQAFDFDLD
                     HAFGFYSKLDDYVFDSPVRYELFADLDGDREAQSVKRTPIAQAFPEPGSKMQFLFDYG
                     DDWRFRVEVIGLGEKAPKTRYPKI"
BASE COUNT          205 a          364 c          342 g          210 t
ORIGIN      
        1 gtccgcctcg ccccgatccc gcgaacggct gagcgccatc agggcgcgcc tttggccttc
       61 cattgccgcg agaggtgact tgcccgccat gagcccaatc tcagatcaga tcaaacgacg
      121 gaatcacggc cccaaccgac ggaatcacgg cccgcatccg tgggacagcc caagcacacc
      181 tgcttagcct tcttgagagt ctgagccgtc tgtgcgctga ggctgcaccg gttgaccgcc
      241 atcaggaggt ggaccggcac cgccatggac ggcaggagca ccgtatgctc gaagtcttca
      301 agactgaggc ccgcctcgat ccagagtggc agtccctgat cgcctcagtg gcccgcatct
      361 cgcgcctcac ttgggtgaag gacacccaat ctggcctgtg gcgggcgcgc aaggaggtgg
      421 cctactatgc ctgccagatg cctctgacag cggcccgctt tgcccaagcg gttcgaagcc
      481 actggggtat tgagaaccgc gcccactatg tccgtgacca aggtttccgt gaggacgaca
      541 gccgcatccg tcgcaagccg ggcatggtcg ctcgcctgcg ctcctttgcg ctcaacatcc
      601 tgcgggcgaa tggcatcggc aatgtcagcc aggcgctcta tcgtaatgcg ctcagcctcg
      661 atcacctgct ggcctacccg gtcacgtgag gccagggtcg ggcgtggtcc aagggccgag
      721 ggagcgccct ttggagaggc tcatgccttc aaggacccac gtcttccgcg tccggctgtg
      781 gcccaagatc tcccgggaca tcgagatcga gagtagcaag tcgctgtacg accttgcggc
      841 cgctatcgtg caggcctttg acttcgatct cgatcacgcc tttgggttct acagcaagct
      901 ggatgactac gtattcgact caccggtgcg ctacgagctg tttgcggacc tggacgggga
      961 ccgtgaggcc cagagcgtca agcgcacccc gatcgctcag gcttttcctg agccgggcag
     1021 caagatgcag ttcctgtttg actacggcga tgactggcgg tttcgggttg aggtgatcgg
     1081 cctcggtgag aaggccccga aaacacgcta cccgaagatc c
//
LOCUS       DASRPQ010000693         1195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1967741, whole genome shotgun sequence.
ACCESSION   DASRPQ010000693 DASRPQ010000000
VERSION     DASRPQ010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1195
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1967741"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..304)
                     /locus_tag="VFD73_08030"
     CDS             complement(<1..304)
                     /locus_tag="VFD73_08030"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HZI73966.1"
                     /translation="MKVVRLPYQSPRANSIAERFVGTCRREVLDHLLIFSARHLEAVL
                     KEFLVHYHQARPHQGLDQRCPDPVPAVIPLPVVSRSSATIGSDVYSTSTPGPPDRVD"
     gene            complement(301..912)
                     /locus_tag="VFD73_08035"
     CDS             complement(301..912)
                     /locus_tag="VFD73_08035"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI73967.1"
                     /translation="MAALTQLLPRSAWSALLPKPETLLRWHRDLVRHKWAAFRQRPPR
                     QRPCRDPERRALILKLAEENPRWGYKRIQGEALKLGFKISHMGVAKILRSQGIPPAPR
                     RSQTTWREFVRQHAAQMLATDLFTVETAWLQCLHVLFVIEIASRKAHLAGITANPTGE
                     WVAQQARNLAWKLQDGVVQPATCFVIGTASSPPASIRSSARKA"
BASE COUNT          212 a          356 c          432 g          195 t
ORIGIN      
        1 cgtcaactcg atcaggcggc ccaggcgtac tcgtggagta aacgtccgag ccgatcgttg
       61 cggacgatct gctgaccaca ggaagtggga tgacggctgg gacaggatca gggcagcgct
      121 ggtcgaggcc ttggtgcggg cgtgcctggt ggtaatggac caggaactcc ttgagcacag
      181 cctccagatg gcgggcgctg aagatgagga ggtggtcgag cacctcccgg cggcatgtgc
      241 ccacgaatct ctccgcgatg gagttcgccc gaggcgattg gtagggaagg cgcacgactt
      301 tcacgccttc cgagctgaag acctgatcga agctggcggt gaacttgcag tcccgatcac
      361 gaagcaggta gcgggctgca cgacgccgtc ctgtaacttc caggccaggt tcctggcctg
      421 ctgggccacc cactcgccgg tggggttggc ggtgatgccg gcgaggtgtg ccttgcggct
      481 ggcgatctca atgacgaaga ggacgtggag gcattgcagc catgccgttt caaccgtgaa
      541 caagtcggtg gcgagcatct gggcggcgtg ctgacggacg aactcgcgcc aggtggtctg
      601 gctgcgccga ggagccggcg ggatgccctg gctgcgcagg atcttggcca ctcccatgtg
      661 cgagatcttg aagcccagct tgagcgcctc gccctggatg cgcttgtagc cccagcgagg
      721 gttctcttcg gcgagcttga ggatcaacgc ccgccgctcg gggtcgcggc aaggacgctg
      781 ccgaggaggg cgctgccgaa aggccgccca cttgtgccgg accaagtcgc ggtgccagcg
      841 gagcaaggtc tccggcttcg gcagcagggc tgaccaggct gacctcggca ggagctgggt
      901 caaggcagcc aacaggacgc gatcgcctag ctgccaggcg ggcttgccga ccttgcgctc
      961 caggacacgg agctgatggc gcggagctgg gcgtcggagc cggtgcggac gaggaccaag
     1021 tcggtgagga agcgagtgag ctggtacggg aggccgagaa gcatggcagg gaatcctgcc
     1081 cgatctaccc gaccatcagc ggccaagacc gtctggcccg gccttgccgg tttacctacc
     1141 gtcggctcaa gaggcgccaa ttcgaaccga cgctgggcgg tttaccccac gcgtc
//
LOCUS       DASRPQ010000694         1482 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1020484, whole genome shotgun sequence.
ACCESSION   DASRPQ010000694 DASRPQ010000000
VERSION     DASRPQ010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1482
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1020484"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..307)
                     /gene="yajC"
                     /locus_tag="VFD73_08040"
     CDS             complement(<1..307)
                     /gene="yajC"
                     /locus_tag="VFD73_08040"
                     /inference="COORDINATES: protein motif:HMM:NF014725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HZI73968.1"
                     /translation="MLQSGSGSGLSVLVLQVVAIGLVFYFLVMRPSGQARKRHAELLT
                     QLKKGDEVMTSGGIIGRVKDIKEVDTDGVKEVRVTLESGTSTFVIERSRIVRVGSNPA
                     "
     gene            complement(307..>1482)
                     /gene="tgt"
                     /locus_tag="VFD73_08045"
     CDS             complement(307..>1482)
                     /gene="tgt"
                     /locus_tag="VFD73_08045"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HZI73969.1"
                     /translation="APAADREDPGHRALMFEFRIDGTAGAARAGTLTLPHGQVRTPAF
                     MPVGTHAVVRGLSAADVRRTGAQMILGNTYHLHLRPGEEVIERLGGLHRFTTWDRPML
                     TDSGGFQVFSLQGLRRIQEHGVEFQSHIDGTLRTLSPERTVEIQWKLGADIAMAFDHV
                     VPGQSSVELACEGMERTLRWLERCKARHQDLADGNQVTQALWPIIQGGVHDELRMRSL
                     EGTLERGPWTGVAVGGLSVGEPKPVMHRILERLHPALPANIPRYLMGVGFPADLLEGI
                     ARGIDLFDCVAATRNGRHGTAWLPTGRLNVRSAALRDSAAPLDPTCDCETCTTYPRGY
                     LRHLFVVEDILGLRLISIHNIRFLVRLGEQARSHILAGTFDGWSRDWLHCHYGRGDH"
BASE COUNT          273 a          491 c          460 g          258 t
ORIGIN      
        1 tcgcggggtt gctgccgacg cgaacgatgc gagagcgctc gatcacaaac gttgaggtac
       61 cgctctccaa cgtgaccctg acctccttga cgccgtcggt gtcgacttct ttgatgtcct
      121 tcacccgacc gatgatgcca ccgctggtca tgacttcgtc gcccttcttg agctgggtga
      181 gaagctcggc gtggcgcttc cgagcctggc ccgaggggcg catgacgagg aagtaaaaca
      241 ccaggccgat ggccacgacc tgcaggacca ggacggagag gccgctgccg gagccgcttt
      301 gaagcatcag tgatctcctc gcccatagtg gcagtgaagc cagtcccggc tccacccgtc
      361 gaaggttccc gccagaatat ggctccgggc ctgctctccc agacgcacca ggaagcggat
      421 attgtggatc gagatcagcc gcaggcccag gatgtcttcg accacgaaca ggtgccgcaa
      481 atatccgcgg ggatacgtgg tacaggtctc gcagtcgcag gtagggtcga ggggcgcagc
      541 agagtctctg agcgcggcgc ttctcacatt gagccgcccg gtcggaagcc atgccgttcc
      601 atgccggccg ttccgggtgg ctgccacgca gtcaaagaga tcgattcctc gagcgattcc
      661 ttccagcaaa tccgcgggaa aaccgacccc cataagataa cggggaatat tggcaggcag
      721 tgcggggtgc aatcgctcga ggatgcgatg cattaccggt ttgggctcgc cgaccgagag
      781 gccaccaaca gccacgccgg tccaggggcc gcgctccagc gtaccctcga gagatcgcat
      841 gcggagctcg tcgtgcactc cgccctggat gatgggccag agtgcctgag ttacctggtt
      901 gccgtccgcc aaatcctggt gtctcgcctt gcagcgctcg agccagcgga gcgtccgctc
      961 catgccttca cacgcgagct caaccgagga ttggcccggc acgacgtgat cgaatgccat
     1021 ggcgatgtcc gcacccaatt tccactggat ctccaccgtc cgctcgggcg acagggtgcg
     1081 cagcgtacca tcgatatggc tctggaactc aaccccgtgc tcctggattc ggcgtagtcc
     1141 ctgcagggag aacacctgga atcccccgga atccgtcagc atcggccggt cccaggtggt
     1201 gaagcgatgg aggcctccca gtctctcgat cacctcctca cccggccgga gatgcaggtg
     1261 ataggtattg cccaggatca tctgggcgcc ggtgcgccgc acatccgccg cgctgaggcc
     1321 ccgcaccacc gcgtgggtgc ccaccggcat gaacgcgggc gtccgcacct ggccatgcgg
     1381 gagagtaagc gtgcctgccc gcgcggcacc cgctgtcccg tcgatccgaa attcgaacat
     1441 cagcgcgcgg tgaccaggat cctctcgatc tgccgccggt gc
//
LOCUS       DASRPQ010000695         2156 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4153953, whole genome shotgun sequence.
ACCESSION   DASRPQ010000695 DASRPQ010000000
VERSION     DASRPQ010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2156
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4153953"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            729..1058
                     /locus_tag="VFD73_08050"
     CDS             729..1058
                     /locus_tag="VFD73_08050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73970.1"
                     /translation="MTHHPDAERLPHAAREYLAHRLDGARDLYLLALALGTRGDGATL
                     FGRMIREARIHFTAVIEECRIAGLDTTAIAVMLGKMNKELVDSIRPEIWEHLEHLIAQ
                     RARGHSE"
     gene            1325..1600
                     /locus_tag="VFD73_08055"
     CDS             1325..1600
                     /locus_tag="VFD73_08055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73971.1"
                     /translation="MFTLPRLTARLAVITAFAALAAACNTDSNGPSSKAPSNPALLAE
                     REGRGGGGGGGGAAASSFAVLANAAVTCGPDGDGRQLGGVTRARRGK"
     gene            complement(1884..>2156)
                     /locus_tag="VFD73_08060"
     CDS             complement(1884..>2156)
                     /locus_tag="VFD73_08060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI73972.1"
                     /translation="AMAKAREPEKLAPHLVEILCPVRLLVGTARHDSGVEDSEVKLFE
                     QTLRSFALDSAVGAGHFVQEEQPEAVVTAVDRLRASVTPNIAKGSF"
BASE COUNT          429 a          690 c          660 g          377 t
ORIGIN      
        1 gacttcgtct cattttgttc cgctgacact agttgtgccc cagctgtgcc ccgctcactc
       61 ctcgggaggt ggtttcgaag cccccggggc cgactaattc atccgcagcg ttcgtcgggc
      121 ggctcaccta tctgggccag gcgacggcac gcgcgcggag gcagctcccc agtgctccag
      181 gacatggtgg atcactggcg acagcatcac gcccgcaacg acaaggaaca cgccacctgc
      241 gaacagcgca tacaccccag caagccactt tccggcttca gtatgcagcg gatccacggg
      301 tcccatgccg ccgagaagca tggctgcgtt caagaaagcg ctcgaccacg aaagtccctc
      361 aacccaatga tacatggcca tcccgagcag tagggtagct gccgccagcg gaaggagggc
      421 aagacctgtc cgcaccatac gccgagcgag gtgccaagga tgacgttgcg caagcggatt
      481 gtgccgtggc gccaagactc cctctcttac catagtgaac gtcccgaacg gatcgtgagc
      541 gaacgtcccg aatggatcgt gcctaacctg ctagccgaat gcccgcaggc gcaagaaggc
      601 ggagcggccg tcgccctgcc gagccgtttg acactccagc ggggccgccg tcatttgagt
      661 aagcccagag gcacgatgtg aacaaacacg cggcgaaaaa tgatccgtca ggaaacagga
      721 gcaatgctat gactcaccat ccagatgccg agcgcctgcc tcacgccgcc cgggaatacc
      781 tggctcaccg gctggacggc gctcgggacc tctatctgct tgccctggcg ctgggcacgc
      841 gcggggacgg ggcgaccctg ttcggccgca tgatccggga agcccggatc catttcaccg
      901 ccgttatcga agagtgccgc atcgccggcc tggacaccac cgccatcgcc gtaatgctcg
      961 gcaagatgaa taaggaactg gtggacagca tccggcccga gatctgggaa catctggagc
     1021 acctcattgc tcagcgtgct cggggtcact cggagtgaga cgctccttat ccgtatccgt
     1081 cccgtgcgct ccaagaccaa tccaggtgac cattcccgtc tgacgcatgc acccaaagaa
     1141 ctagctcgtc cgacttcagt aggtgggtcg cgcccgctca caattgttaa gtcgattttc
     1201 atcccgccga cggatgtttg tcttcgccaa gcgctggcag ttttaccgcg tgggcgagcg
     1261 aggatccgct aacgacatgg atcccggaac gcacctgtgt tcacaccaaa tgctgggagg
     1321 aaccatgttc actctgcctc gcctgacggc gcgactggcc gtcattacgg cgttcgccgc
     1381 gcttgccgcg gcgtgcaaca ccgattccaa tggaccgtcg agcaaggcac catccaaccc
     1441 ggccctcctc gcggagcgcg aggggcgtgg tgggggcggt ggaggcggtg gcgcagcggc
     1501 gtcgagtttc gcggtgctcg ccaacgcagc tgtgacctgc gggcctgacg gtgatggtcg
     1561 ccaattgggc ggtgtaaccc gcgcacgccg cggcaagtaa cccgacgacc gtgaccgtgg
     1621 cgaggagggt tagcattcgg ttcttgatga tgtacctcat aggactgctc ctaacaggct
     1681 tcgtgtgatg agagtcttcc agtacaaacc gccttccaga ctgctgtggc aggaaggaca
     1741 ctgcgcgcag cttacatcaa ttgagtgcgg cgaggctatc catcgtagtg atgacgtgaa
     1801 atcgccacgg ggatgacggg cagaggagca gccgggatga gagcggtaac acgccggaaa
     1861 gcgcgggacg agactgatgc cctctaaaat gagcctttgg cgatgtttgg agtcacgctc
     1921 gccctcagcc ggtctacggc cgtcacgacc gcctcgggct gttcctcctg aacgaagtgc
     1981 cccgccccga cagcggagtc gagtgcgaag gagcgcaagg tctgctcgaa cagcttcacc
     2041 tccgagtcct cgacgccgct atcgtgccgc gcggttccaa caaggaggcg caccgggcag
     2101 aggatctcca ccagatgcgg tgcgagtttc tccggctcgc gcgccttcgc catcgc
//
LOCUS       DASRPQ010000696         2069 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3223224, whole genome shotgun sequence.
ACCESSION   DASRPQ010000696 DASRPQ010000000
VERSION     DASRPQ010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3223224"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..1555)
                     /locus_tag="VFD73_08065"
     CDS             complement(158..1555)
                     /locus_tag="VFD73_08065"
                     /inference="COORDINATES: protein motif:HMM:NF014877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HZI73973.1"
                     /translation="MNVPKSIFREYDIRGLVDKELTPEFARALGRAFASVAADRLRHP
                     ATIAVGRDNRPSGPRLSEGVRRGIADAGGTAIDVGTLPTPALYFAVTALKTDGGVQVT
                     GSHNPPEFNGFKLVLEGEAFHGEEILDLWEIIMAERWHSGKGKETSDSSVLQRYREAI
                     ISRHSLKRPVRVVVDCGNGAGSLIAVSTLQGLGAEVTPLFCESDGTFPNHHPDPTVPE
                     NLRDLQMAVRRTGAELGIAFDGDADRIGAVDETGEIIYGDQLLVLFGRDAVRRFGKGT
                     PVIFDVKSSEVLPAALTKAGAQPVMWKTGHSLIKAKMKELNAPLAGEMSGHMFFGGDY
                     LGFDDALFAAARLLEIVSRERFGLAPLLADLPRTFATPEIRVETSEATKFDLVERAAL
                     HFASLYPVNTIDGVRITFPHGWGLLRASNTQPVLVMRFEASEPGLRDQYRAEVEGWLE
                     AQKKADVKETAHRTS"
     gene            complement(1552..>2069)
                     /locus_tag="VFD73_08070"
     CDS             complement(1552..>2069)
                     /locus_tag="VFD73_08070"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HZI73974.1"
                     /translation="GSGAVLLYLAAYGLTTLASFGFLAALGRGGERDVTYDDIAGLAG
                     TRPWVALGLSVCMLSLLGFPGTFGFIGKWYIISANVAEGQIILPVLLVLTSVVSAGYY
                     LPVIMSMYMKPATGETTYQGLRLAPTAAGAIAVSVIAVLLFGFWPGGALDAALHSAAT
                     LTQTGVPVARQ"
BASE COUNT          386 a          674 c          659 g          350 t
ORIGIN      
        1 agaagatgcc agtcggtgat gaatcttgcg gcagcgggcg agagttgcgc ggcccaccaa
       61 cggtcggcga ggagcgttgc cgtccaacgt cccgcgaaca gcagaaccac gataactgcg
      121 actacgccgg cgaggcgtcg ccctcggcgg gacaacgtta actcgtgcgg tgagcggttt
      181 ctttcacatc cgcttttttc tgcgcctcca gccagccctc gacctccgct cgatactggt
      241 cgcgcaaacc gggctcgctg gcctcgaacc gcatgaccag caccggttgg gtattcgatg
      301 cgcggagcag accccaccca tgggggaagg tgatgcggac accatcgata gtgttcaccg
      361 ggtagagcga ggcaaagtgc agggcggcgc gctccaccag gtcgaacttg gtcgcctcgg
      421 aggtctccac ccggatttcc ggcgtggcaa acgtccgagg aaggtcggcc agaagtggag
      481 ccagcccgaa ccgttcacgg cttacgatct ccaggaggcg cgccgccgcg aacaaggcgt
      541 cgtcgaagcc caggtaatcg ccaccaaaga acatgtggcc actcatctcg ccggccagcg
      601 gagcgttgag ctccttcatc ttggctttga tcagcgagtg ccccgtcttc cacatcaccg
      661 gctgagcgcc ggccttggtg agcgccgccg gcagaacttc cgacgatttc acgtcgaaga
      721 tgaccggggt tcccttcccg aagcgcctga cggcatcacg gccgaacagc accagcagct
      781 ggtcgccata gatgatttcc ccggtctcgt cgacggcgcc gatccgatcg gcgtcgccgt
      841 cgaacgcaat gccgagctct gcgccggtgc gccggacggc catctggaga tcgcgcaggt
      901 tctcgggcac cgtgggatcg ggatggtgat tgggaaaggt gccgtccgac tcgcagaaga
      961 gcggcgtcac ctctgccccc aggccttgca gagtggagac tgcaatcagg ctgcctgcgc
     1021 cgttcccgca atccaccact acccttaccg gccgcttcaa tgagtggcgg ctgatgatcg
     1081 cctcacggta gcgctgcagc accgagctgt ccgaggtttc cttccctttt ccggagtgcc
     1141 agcgttccgc catgatgatt tcccagagat ccaggatctc ttcaccgtga aacgcttcgc
     1201 cctccagcac cagcttgaac ccattgaatt cgggcggatt gtgggagcca gtgacctgga
     1261 cgccgccgtc ggtcttcagg gcggtaaccg cgaaatagag cgccggcgtg ggcagcgttc
     1321 cgacatcgat ggctgtgccg ccggcgtcgg caatgccgcg ccgcacgcct tccgatagcc
     1381 gaggacccga cggccggttg tctcggccga ccgcaatcgt tgccgggtgt ctcaggcgat
     1441 cggctgcgac actggcgaac gcgcgtccga gcgcgcgggc aaactccggc gtcagctctt
     1501 tgtcgaccag gccccggatg tcgtactctc tgaagatcga tttgggaacg ttcattggcg
     1561 tgccaccgga actccggtct gggtcaacgt tgccgcactg tgcagcgccg cgtcgagagc
     1621 gcctccgggc cagaacccga agagcaggac ggcgatcacc gagacggcaa tggccccagc
     1681 cgctgtcgga gccagccgaa ggccctggta ggtggtctcg cccgtggctg gtttcatgta
     1741 catcgacatg atgacaggca ggtaataccc tgcggacacc acgctggtaa ggaccagcag
     1801 caccggcagg atgatctggc cctcggcgac attagccgag atgatgtacc acttgccgat
     1861 gaatccgaag gtgccgggga atccgaggag cgacagcatg cagacgctga gccccagcgc
     1921 tacccaggga cgggttccgg ccaggccggc gatgtcatcg taggtgacgt cccgctcgcc
     1981 accccggccc agtgcagcca aaaacccgaa gctcgccagt gtggtgagtc cgtaagcggc
     2041 gaggtagagg agcaccgcac cggagccga
//
LOCUS       DASRPQ010000697         1735 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4469856, whole genome shotgun sequence.
ACCESSION   DASRPQ010000697 DASRPQ010000000
VERSION     DASRPQ010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1735
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4469856"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            191..520
                     /locus_tag="VFD73_08075"
     CDS             191..520
                     /locus_tag="VFD73_08075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73975.1"
                     /translation="MAISNIYSTWLWASSGGQYEISTTVVRSGGRGWAFAETELSRCS
                     GSGAAYAWISGYRYQPSNDQIFNAISPDPDGALSAQWISDCLSATFTVRVINHYAYAI
                     AKLSPWD"
     gene            530..820
                     /locus_tag="VFD73_08080"
     CDS             530..820
                     /locus_tag="VFD73_08080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73976.1"
                     /translation="MSDNLQETPGLTIVRTRAYFDPETGQIIHVHRVASAEPLTDEQV
                     NEELDAFAASIEQRHGRVLDSVDVEEAEFVASLSPEVLLKVEVATRRLVRGA"
     gene            848..1240
                     /locus_tag="VFD73_08085"
     CDS             848..1240
                     /locus_tag="VFD73_08085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73977.1"
                     /translation="MAFTSGQCIQDQYGYRYTLTIDAVHQYITGTVEGGQGGGPWILT
                     GSYVQSSPSDPWIFELTVANSHGTGQPGFVPIYKLKGVEPNAAWYYDTGYGGQEFQFR
                     ACTAVAAAEEVAAEPLRSGERQGARSGE"
     gene            complement(1439..>1735)
                     /locus_tag="VFD73_08090"
     CDS             complement(1439..>1735)
                     /locus_tag="VFD73_08090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73978.1"
                     /translation="GRVKPHDIYVGNGGAPFVLRLRWPHWNQTIALGRGVLDEQIPGC
                     TLTPVYLCPRYRHPVRVYLHRVRSHDGARYFTRMRWISHGETIYWRSHRGYWDY"
BASE COUNT          334 a          528 c          562 g          311 t
ORIGIN      
        1 ctggcacagc acagctcccc cttccccgtc ggatccgggg atccgccatc tgttcagagc
       61 cgcgacaccg ggccaggaat acatggggtc agcacgagcg accagcctgt ctccttctgg
      121 gctcacggcg gtgtatcagt ccctttctcg tcggcctctt tcacactgag gcttggaaca
      181 ggaggtcgtc atggccatca gtaacatcta ctccacctgg ctctgggcga gcagcggcgg
      241 ccagtacgag atttcgacga ccgtcgtccg gtcgggtggg cggggctggg ccttcgcgga
      301 gacagagcta tcgcggtgct ccggttcggg ggcggcttac gcgtggatct cgggataccg
      361 ctatcagccc agcaatgatc agatcttcaa cgcgatctcg cccgaccccg atggggcgct
      421 cagtgcccag tggatcagcg actgcctctc cgcgactttt acggtgcgcg tcataaacca
      481 ctacgcctac gccatagcaa agctctcacc atgggattga ggaatggtaa tgagtgacaa
      541 ccttcaagag acgcccggcc tgaccatcgt gcgcacccgc gcgtacttcg accccgagac
      601 cggccagatc atacacgtgc accgggtcgc ctcagcagaa cccctgacgg acgaacaggt
      661 gaacgaggaa ctggacgcct tcgcggcgtc cattgagcag cgccacggtc gtgtgctcga
      721 cagcgtcgat gtcgaggagg ccgagttcgt ggcgtccctg agccccgagg tcctgctcaa
      781 ggtcgaagtt gccacccggc gcctcgtccg cggcgcctga agcaactacg gcaggaagag
      841 gtgtgatatg gcatttacca gtggtcagtg catacaagat cagtacggct atcgatatac
      901 tctgactatt gacgccgtgc atcagtatat taccggcacg gttgaaggcg gacagggggg
      961 aggtccgtgg attctgaccg gtagttatgt gcagagctca ccatccgatc cgtggatatt
     1021 cgagctgacg gtggcaaact cccatggcac cggccagcct ggattcgtac ccatctacaa
     1081 gctgaagggc gtcgaaccca acgccgcctg gtactacgac acgggatacg gcggtcagga
     1141 attccagttc agagcctgca cggcggtcgc ggctgcggag gaagtggctg cggaaccgct
     1201 gcgttctggg gaacggcagg gtgcacgctc cggagaataa gttaggccag aagctctcgt
     1261 cccctcgggc ggcagtatgc gctccggatg aatcgtcggt gcaattttgc atcgcgatgg
     1321 aggaagctga gcagagcttc tggaaccata ggccaaggtg ctcatgcgga cgacatccgc
     1381 aacccgtccg taacgggcac ggtgtgaggc tgccgggcag atgatgccgc cgcggccgct
     1441 aatagtccca gtagccgcga tgcgaccgcc agtagatggt ttcgccgtgc gagatccagc
     1501 gcatccgggt gaagtaccgg gcgccgtcgt ggctccgcac ccggtgcaga tagacccgta
     1561 cggggtgccg gtagcgcggg cacaggtaga ccggcgtgag ggtgcagccg gggatctgct
     1621 catcgagcac gccccggccc agggcgatgg tctggttcca gtgcggccag cgcagacgga
     1681 ggacgaacgg tgccccgccg ttaccgacgt agatgtcgtg cggtttgacc cggcc
//
LOCUS       DASRPQ010000698         1126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1020839, whole genome shotgun sequence.
ACCESSION   DASRPQ010000698 DASRPQ010000000
VERSION     DASRPQ010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1020839"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..257
                     /locus_tag="VFD73_08095"
     CDS             <1..257
                     /locus_tag="VFD73_08095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73979.1"
                     /translation="AINQWQFGDQVLETNVYVFAPPQTKKYEILHLFDYPAQAGYAPN
                     VGLAGGQQEIAGESATDVWAGWEQRDWQGWSALEGFKEEK"
     gene            259..780
                     /locus_tag="VFD73_08100"
     CDS             259..780
                     /locus_tag="VFD73_08100"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HZI73980.1"
                     /translation="MADTRVTHPPPDGDPLWQQDFPISRYEELNNSRRQFLKFLGLTS
                     LAFFTGTLATALKAVFESRRTTTLQPMRIAAVADVPEGSSLNFHYPDESYPAVLVHLP
                     GNQYVAYESRCTHLLCPVLYQPNKERIFCPCHEGVFDPASGQNLAGPPPRPLNGIKVE
                     VRDNAVYAVGRAD"
     gene            780..1010
                     /locus_tag="VFD73_08105"
     CDS             780..1010
                     /locus_tag="VFD73_08105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73981.1"
                     /translation="MLGRAPRLPHGVIRSIIITLMLLNGVQLVLLQGAINSSAQGQLD
                     TTWTYVAISAVGVLCSLGVIAYAFARGRGPGQ"
BASE COUNT          199 a          353 c          378 g          196 t
ORIGIN      
        1 gggcgatcaa ccagtggcag ttcggcgacc aggtgctcga aaccaacgtg tacgtgttcg
       61 cgccgccgca gaccaagaag tacgagatct tgcacctgtt tgactatccc gcccaggccg
      121 ggtacgcgcc gaacgtgggt ctggccggcg gccagcagga gattgccggc gagagcgcga
      181 ccgacgtgtg ggccgggtgg gagcagcgcg actggcaagg atggagtgcg ctggaagggt
      241 ttaaggagga gaagtaaggt ggccgatacc cgtgtcacgc atccgccgcc cgacggcgac
      301 ccgttgtggc agcaagactt tcccatcagc cgctatgagg agctgaacaa cagccggcgg
      361 cagttcctta agttcctggg gctgacctcg ctggccttct tcaccggcac gctggcgacg
      421 gcgctaaagg cggtgttcga gagccggcgc acgaccacgt tgcagccgat gcgcatcgcc
      481 gcggtggccg atgtgccgga aggtagctcg ctgaacttcc attaccccga cgagagctac
      541 cctgccgtgc tggtccactt gccaggcaac cagtatgtgg cctacgagtc gcgctgcacg
      601 cacctgctct gcccagtgct ctatcagccc aataaggagc gcatcttctg cccgtgccac
      661 gagggggtat ttgacccggc cagcgggcag aacctggccg gccccccacc ccgcccgctc
      721 aacgggatta aggtggaggt gcgggacaat gcggtgtacg ccgtggggag ggccgactga
      781 tgctgggccg tgccccccgc ttgccccatg gcgtgatccg ctcgatcatc atcacgttga
      841 tgctgctcaa cggcgtgcag ttggtgctgc tccagggggc catcaacagc agcgcccagg
      901 gccagcttga tacgacctgg acctatgtgg cgatctcggc ggtgggcgtg ctctgctcgc
      961 tgggcgtgat cgcctatgcc tttgcccgcg ggcgcgggcc gggccagtaa cggaggccac
     1021 agacgttatg acggttacac cccccctgga cgcccggcaa ctgtccaatg tcgagtggga
     1081 agtgctctat ttactgcacg acgcgctggg gcagttgcgc aaaatg
//
LOCUS       DASRPQ010000699         2605 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_82427, whole genome shotgun sequence.
ACCESSION   DASRPQ010000699 DASRPQ010000000
VERSION     DASRPQ010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2605
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82427"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..396)
                     /locus_tag="VFD73_08110"
     CDS             complement(<1..396)
                     /locus_tag="VFD73_08110"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI73982.1"
                     /translation="MATRKLRKKPRTYQKKRRAEQEAETRQRIVEAMVDLHREVGPAR
                     TTISAIAERAGVERLTVYRHFPDERSMFEACTSHYATVVPQPDPARWEGVEEPAERLR
                     ATLLTFYEYYRGAEQMLVNATRDLPQLPAL"
     gene            533..1135
                     /locus_tag="VFD73_08115"
     CDS             533..1135
                     /locus_tag="VFD73_08115"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZI73983.1"
                     /translation="MATTQIPQFESALSAGSAPTALSAPSTSRFDGSTGPRIIGPRDG
                     KFVDLRSVGVRFMIWGAETGGTFSLVEHPIPPRTLVAPLHIHTREDEYSYVLEGRMGA
                     LLGEDVVYAEPGDLVFKPRNQWHTFWNAGDTTCRLLEIISPAGFEHFFNDLGEQMAAA
                     KAVSVKDVPGLPQLGERYGHYFRPESIPEICRKHGLRYPA"
     gene            1264..1656
                     /locus_tag="VFD73_08120"
     CDS             1264..1656
                     /locus_tag="VFD73_08120"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZI73984.1"
                     /translation="MATQTSSFTDTPEKVLATIVEGINSGNLEMLLDLYEPAAAFAQQ
                     PGRLAHGLAGVCESLDGFIGMQRKLDLKVTRVLEVDDLALVVGEWSFSGTAPDGEPMT
                     LAAKNADVLRRQADGSWRFVIDNPWGTQ"
     gene            1709..2566
                     /locus_tag="VFD73_08125"
     CDS             1709..2566
                     /locus_tag="VFD73_08125"
                     /inference="COORDINATES: protein motif:HMM:NF042696.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6597 domain-containing transcriptional
                     factor"
                     /protein_id="HZI73985.1"
                     /translation="MPQPVQTLEYEAAPGRWRFSSAAPDPALRGIVQEYWEVEGQLTP
                     FRERVLPNGYTELMINLGPPHQLITHAGTSVWQRAWFSGLHERSIVIESHDGTHLVSA
                     RLHPLGAFRLLGPRVAKLVNKVVDLEGLLGRPVAELREVLLAADSPEQRFAHLEEFLN
                     QQISHNRDPSVIVARAARQIEDANGNLRIAAIPEQLGVSRKQLWLRFTGELGLSPKAY
                     AQLQRFVWTLARLRERTSVDWSGLAAAAGYADQAHLVRDFRRAAFASPTEFLRDRTPD
                     SSALLEEVG"
BASE COUNT          458 a          864 c          783 g          500 t
ORIGIN      
        1 gagtgccgga agctggggca ggtctcgggt cgcgttcacc agcatctgct ccgccccgcg
       61 gtaatactcg tagaacgtaa ggagggtggc gcgtagccgc tcagccggtt cctcaacccc
      121 ctcccatctc gccggatcag gctggggcac caccgtcgca tagtggctgg tgcaggcttc
      181 gaacatcgac cgttcgtcgg ggaagtggcg gtacaccgtc agccgctcca ctccggcccg
      241 ctcggcgatc gcgctgatcg tagtccgcgc cggccccacc tcccggtgca gatccaccat
      301 cgcctcgacg atgcgctgcc gagtctccgc ctcctgctcg gcccgccgct tcttctggta
      361 tgtccggggt ttcttccgga gtttcctggt cgccatgtca gtgaacatat ctgtttactg
      421 aactcttgac aagaatccag ccgattcgta tcgtatccgc gcgttcagta aacacgcatg
      481 ttcaatgaat cgaatccgag caccgacacc ttgacgatca ggagataact cgatggctac
      541 gacacagatc cctcagttcg agtcggcgct ttcggccggt tccgctccta ccgccctttc
      601 cgccccgtcc acctcccgct tcgatggttc gaccggcccc cggatcatcg gcccgcgcga
      661 tggaaagttc gtagaccttc gttcggttgg tgtccggttc atgatctggg gggcggaaac
      721 cggcggcacc ttttcactgg tcgagcaccc gatcccgccc cgcactctgg tcgccccgct
      781 gcacatccac acccgcgagg acgagtacag ctacgtgctc gagggccgga tgggcgcttt
      841 gctcggcgag gacgtggtct atgccgagcc gggcgacctc gtgttcaaac cgaggaacca
      901 atggcacacg ttctggaacg ccggcgatac cacctgccgg ctcctcgaga tcatctcgcc
      961 cgccggcttc gagcatttct tcaacgacct cggcgagcag atggcggccg cgaaggctgt
     1021 cagcgtcaaa gatgtgcccg gtctgcccca gctcggcgag cgctacggcc actacttccg
     1081 gccggagagt attccagaga tctgcaggaa gcacggtttg aggtacccgg cgtgagccgc
     1141 gcgtactcgg cgcttcagac atctcaacat ctcatcccga gcgacgcgag ggcctggttc
     1201 gcagagcagg tactcagatg cctcactttg ttcgggatga ggtacaccct gaaaggatga
     1261 ttcatggcca cccaaacgag ctccttcact gatacgcccg aaaaggtgct ggcaacgatt
     1321 gtcgagggga ttaacagcgg aaatctcgag atgcttctgg atctgtacga gccggctgcc
     1381 gccttcgccc agcagcccgg gaggcttgcc cacggactag ccggcgtatg tgaatcgctc
     1441 gacggattca tcggcatgca gcgcaagctc gacctcaagg tgaccagagt cctggaggtc
     1501 gacgatctgg ccctcgtggt tggggagtgg tcgtttagcg gcaccgcgcc tgacggtgaa
     1561 ccgatgacgc tcgctgccaa gaatgccgat gtgctccggc gccaggccga tggctcctgg
     1621 cggttcgtga tcgacaatcc atggggaact cagtgacgct cagcgtgggc tctaccgccg
     1681 ctctcgattc ggggagctag attagcgcat gccccagccg gttcagacac tcgaatacga
     1741 ggccgcgcca gggcgctggc gcttttccag cgcagcgccc gatccggcat tgcggggcat
     1801 cgtccaggaa tactgggaag tcgaggggca gctcaccccg tttcgcgagc gtgtgctgcc
     1861 caacggctac accgagctca tgatcaacct cggtccgccc catcagctga tcacgcacgc
     1921 gggaaccagc gtatggcagc gggcctggtt ttccgggctg cacgagcgtt cgatagtgat
     1981 tgagtcgcac gacggcaccc atctcgtatc cgcgcgactc cacccgctcg gagcctttcg
     2041 ccttctcggc ccccgcgtcg ccaagctggt aaacaaggtc gtcgatctcg agggtctgtt
     2101 gggccgaccg gtcgccgagc tccgggaagt tctcctcgct gccgattctc ccgagcagcg
     2161 tttcgcccat ctcgaggaat tcctgaatca gcagatctcc cacaaccgtg acccgtcggt
     2221 catcgtggcc cgagccgcac gccaaatcga agacgccaat ggcaacctcc gcatcgctgc
     2281 gatccccgag cagctgggcg tgagccggaa acagctctgg cttcgattca ctggggagct
     2341 ggggctctcg ccgaaggcgt acgcgcaact ccagcgtttc gtctggaccc tcgcgcgatt
     2401 gcgcgagagg accagcgtcg actggtccgg gttggcagcg gcggccggct acgctgatca
     2461 ggcgcacctg gtgcgggact ttcgccgcgc cgcctttgcc agcccgactg agttcctgcg
     2521 agaccgcaca cccgacagca gcgcactgct cgaggaggtg gggtaacaaa tcttcaagac
     2581 ttcgagttgg ccgttcccat attgc
//
LOCUS       DASRPQ010000700         1297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1648371, whole genome shotgun sequence.
ACCESSION   DASRPQ010000700 DASRPQ010000000
VERSION     DASRPQ010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1648371"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="VFD73_08130"
     CDS             complement(<1..222)
                     /locus_tag="VFD73_08130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012631079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HZI73986.1"
                     /translation="MTSEPATYPGYRFPAEVLQHAVWLYHVFSLSLREVELILAERGV
                     TVSHESIRQWCLAFGGEFARRLRRRRPKPG"
     gene            complement(395..634)
                     /locus_tag="VFD73_08135"
     CDS             complement(395..634)
                     /locus_tag="VFD73_08135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73987.1"
                     /translation="MSELDRLTAAQLQDAAQVLGDWIGEERHRAEVDAEMLDADGALA
                     CREAADRVRAVQKALEAEATRRESRQTDGEATNKR"
     gene            complement(676..1143)
                     /locus_tag="VFD73_08140"
     CDS             complement(676..1143)
                     /locus_tag="VFD73_08140"
                     /inference="COORDINATES: protein motif:HMM:NF012436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HZI73988.1"
                     /translation="MAELDKDAVVGLLNQILEQELAGVVRYTHYSFLVFGYNRIPIVA
                     WLREQASESLLHAQQAGEMITHLGAYPSLAIGPLLDSHQTDIGTILRESLETEGKALA
                     LYKELLVAVEGRSVMLEEYARQMVHAEELHAGEVDKMLRRPGEIAAFQSPDRG"
BASE COUNT          211 a          452 c          396 g          238 t
ORIGIN      
        1 gcccggcttc ggtcgtcgcc gccgcagcct gcgggcgaac tcgccgccga aggccaggca
       61 ccactgccgg atgctctcat ggctgaccgt gacgccccgc tcggccagga tcagctcgac
      121 ctcccgcagg ctcaagctga acacatggta caaccatacc gcatgctgga ggacctcggc
      181 cgggaagcgg tacccgggat aggtggcggg ctcggacgtc atcccgccag cttcgcccag
      241 ccagctcatt ccggccagag accatcaact tggcaatgcc gttgagctct gcgcgtccac
      301 accgctgatc cgcgcaacac actgggccta atgacgtccg gcgattgctg gctctgtgcc
      361 cggcggcagg agccggtcac cggaagacga ggtctcaccg tttgttcgtc gcctcaccgt
      421 ccgtctggcg cgactcccgg cgggttgctt cggcttcgag cgccttctgc accgctctca
      481 cccgatccgc cgcctcgcgg caggccaggg cgccatccgc gtcgagcatt tcggcatcga
      541 cttcggcgcg gtggcgctcc tcaccaatcc aatcgccaag aacctgggcc gcgtcttgca
      601 gctgcgctgc cgtcagtcgg tcgagttcgc tcatacgccg ctcctcgccg tgccgcattc
      661 gcttgctccg agcggtcatc cccgatcggg tgattggaac gcggcgatct cccctggccg
      721 gcggagcatc ttgtccacct cgccggcgtg cagctcctcg gcatggacca tctgccgggc
      781 gtactcctcc agcatcaccg agcggccctc cactgcgaca agcagttcct tgtacagggc
      841 cagcgctttg ccttcagtct ccagcgactc ccgtagaatg gtgccaatgt cggtctggtg
      901 gctgtcgagc aacgggccga tggcgagcga gggataggca cccaggtggg tgatcatctc
      961 accagcctgc tgggcatgca ggagggattc gctggcctgc tcgcgcagcc aggccacgat
     1021 cgggatgcga ttgtagccga acacgagaaa ggaatagtgg gtgtagcgga caacgccagc
     1081 taactcctgc tcgaggatct ggttcagcag cccgactacc gcatccttgt ccaactcggc
     1141 catggcgcac ctccgtgttg cgcgcgccaa cgagtcgggc aagcccgatg gtcgccggtc
     1201 atcgcagcat cactttagcg gccgtgacgc tccagcttca aaggtaagcc gcctcggcgc
     1261 tcgcatttgt gtcagctgat gaggtcggta ttaatcg
//
LOCUS       DASRPQ010000701         1398 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1968946, whole genome shotgun sequence.
ACCESSION   DASRPQ010000701 DASRPQ010000000
VERSION     DASRPQ010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1398
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1968946"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..669)
                     /locus_tag="VFD73_08145"
     CDS             complement(<1..669)
                     /locus_tag="VFD73_08145"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HZI73989.1"
                     /translation="MKAIRVHQPGDREALQWEELPDPHPKPGEALVRLEAIGLNFIEV
                     YQRMGLYPAPLPLTPGTEGAGRVVEIGAGVTAVKVGDRVAGVNFKGSYAELSLSAADR
                     LVVLPASIETRVGAALMLQGMTAHYLATSTYPLSRESHCLIHAAAGGVGLLLCQIARL
                     RGAHIIGTVSTPEKAALASRAGAQETVLYTRENFVERARQSSGGVGVHVVYDSVGKTT
                     FESSL"
     gene            complement(680..>1398)
                     /locus_tag="VFD73_08150"
     CDS             complement(680..>1398)
                     /locus_tag="VFD73_08150"
                     /inference="COORDINATES: protein motif:HMM:NF013050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI73990.1"
                     /translation="ILALGIITVFVVFFWLAFEQIGSSLNLFAAQRTNRVVGGWLASL
                     LPEGEVPAAWFQAVNPLFVLLLAPMIAALWHRLGQRGPTTATKMAIGLLLLGGAYVIM
                     VAGAAASDRGTLVSPGYLVSFYFVYSVGELCFLPAGFSFVGQAAPRRMASMLMGLWFT
                     ANFVANLLGGYLAGTIGEIERGALVRVFGGQADFFLIFVVSCTTAGVLLWLLIPLIRR
                     LMKSAPASYSPMPAAIDSPL"
BASE COUNT          282 a          471 c          434 g          211 t
ORIGIN      
        1 caggctactc tcgaaggtag tcttccccac tgaatcatag accacgtgca cgccaacgcc
       61 gccgctgctt tgtcgcgcgc gctcgacgaa gttctcccgg gtgtacagca ccgtttcctg
      121 cgcaccggcc cgcgaggcga gtgcggcctt ttccggagtt gataccgtgc cgatgatgtg
      181 ggcgccgcgc agtctcgcga tctggcagag cagaaggcca accccaccgg ccgccgcatg
      241 gatcaggcaa tgactctcgc gcgacagcgg gtacgtcgat gtggcgagat agtgggcggt
      301 catgccctgc agcatgagcg ccgcgccgac ccgggtctcg atcgaggcag ggagaaccac
      361 caaccgatcg gccgccgaca gcgagagctc ggcgtaggag cccttgaagt tcaccccggc
      421 caccctgtcg cccaccttca ccgcagtgac tccagccccg atttccacca ctcgcccggc
      481 gccttccgtc cctggcgtga gcgggagcgg cgcagggtag aggcccattc gctggtacac
      541 ctcgatgaag ttgagcccga tcgcctccag ccggacgagc gcctctcccg gcttgggatg
      601 cgggtctggc agctcctccc attggagtgc ctctcggtcg cccggctggt gaacccgaat
      661 ggccttcatg tgtcgtttcc tacagcggcg agtcgatggc ggccggcatc ggtgagtacg
      721 atgcgggagc agatttcatc agccggcgga tgagagggat gagcagccag agcagcactc
      781 ctgcggtggt gcaggacacg acgaaaatca ggaagaagtc ggcttgtccg ccgaatacgc
      841 gtaccagggc gcctcgttcg atctcgccga tcgtgccagc cagatagccg cccagcaggt
      901 tggccacgaa gttcgcggta aaccacaggc ccatcagcat cgacgccatc cgccgaggag
      961 cagcctgtcc gacgaaagaa aatcccgcgg gcaaaaaaca cagctcaccc acactgtaca
     1021 caaagtaaaa cgagaccagg tagccgggac tgacgagcgt cccgcgatca ctggccgcgg
     1081 cgccggccac catgatgacg tatgcgccac ccagcagcag taacccgatg gccatcttgg
     1141 tggcggtcgt gggcccccgc tggcccagcc ggtgccacaa agccgcaatc atcggcgcga
     1201 gcagcagtac gaacagtggg ttcactgcct gaaaccaggc cgccgggacc tctccctccg
     1261 gcagcaggga cgctagccag ccgccgacca cccgattggt gcgttgggcc gcaaacaggt
     1321 tcagcgaaga gccgatctgc tcgaacgcga gccagaagaa cacgacgaac acggtgataa
     1381 tcccgagcgc caggatgc
//
LOCUS       DASRPQ010000702         1118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4154602, whole genome shotgun sequence.
ACCESSION   DASRPQ010000702 DASRPQ010000000
VERSION     DASRPQ010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4154602"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            288..>1118
                     /locus_tag="VFD73_08155"
     CDS             288..>1118
                     /locus_tag="VFD73_08155"
                     /inference="COORDINATES: protein motif:HMM:NF039283.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalase-like domain-containing protein"
                     /protein_id="HZI73991.1"
                     /translation="MPGRIEDYAIIGNCESAAMVGLDGSIDWLALPRFDSAACFAALL
                     GAPENGRWRVAPVSDLVQVSRRYREGTLVLETRFDTPEGTVVLVDCMGRRNGCADLVR
                     VVLGKRGRVAMRMELVIRCEYGSIMPWVRRLDDGRITAVAGPDRLTLASRVVTHGENM
                     RTVAEFSVDAGEEIPFALTWSPSFRPVPDAANAAETINEATAGWQRWSSSYKTEGSGV
                     WSDAVLRSLITLKALTHLETGGIVAAATTSLPEQLGGPRNWDYRFCWLRDATLTLYSL
                     L"
BASE COUNT          200 a          344 c          361 g          213 t
ORIGIN      
        1 caagccgccg agcacacctg cgatgccgag cttggttcca agcgcgagaa tagtctccag
       61 cgatgaaggt tctatcggtt cgaccgccat aagcatcctt tcatccgcct cgagttgacg
      121 gagaatgtca caaacccagc ccagattagt ggtgccgagg gggtcgaccc agatttcgcg
      181 agctgccccg gggcagagca acgcaaacca atgataaggc gtttcgctcc cgcgcgcccg
      241 gcgtttaccg cggcgggtgt cggagaacag ctcccgaggt gcagcaaatg ccggggcgga
      301 tcgaggatta cgcaatcatc ggcaactgcg agagcgcagc catggtcggc ctggatggct
      361 cgatcgattg gctcgcgtta ccacgctttg actcagccgc ctgtttcgca gccctcctcg
      421 gcgcgcccga gaacggccga tggcgggtcg ccccggtatc tgatttggtc caagtcagtc
      481 gccgttaccg ggagggcacg ctcgtcctgg agacccgctt cgatacgcct gagggcacgg
      541 tcgtgctggt ggactgcatg ggccgccgga atggctgtgc tgacctcgtc cgagttgtgt
      601 tgggtaagcg cggtcgagtg gcaatgcgca tggagcttgt catccgctgc gagtacggct
      661 ccatcatgcc ttgggtcaga cggttggacg acgggcgcat caccgcggtt gcggggccgg
      721 accggcttac cctcgcctct cgtgtcgtga cgcatggcga gaacatgcgc accgttgcgg
      781 agttcagcgt cgatgccgga gaggagatcc cttttgccct gacctggtcg ccctccttcc
      841 ggccggtgcc cgatgcggcg aacgccgcgg agacaatcaa cgaggcgacc gccgggtggc
      901 aaaggtggtc tagctcgtat aagaccgaag gcagtggggt ttggtcggat gcagtcctgc
      961 gctcactcat cacgctgaag gcgctgacac atctcgaaac tggcggtatc gttgctgctg
     1021 ccacaacctc gcttcccgaa caacttggag gccctcgaaa ctgggactac cggttctgct
     1081 ggctgcgaga cgccacgctg acactctaca gcctgctg
//
LOCUS       DASRPQ010000703         1257 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1335882, whole genome shotgun sequence.
ACCESSION   DASRPQ010000703 DASRPQ010000000
VERSION     DASRPQ010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1335882"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..571)
                     /locus_tag="VFD73_08160"
     CDS             complement(<1..571)
                     /locus_tag="VFD73_08160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73992.1"
                     /translation="MPDSPTDLKSEPSATAWPPRPDHQHGTWQDGLPGFLSVIRQRRL
                     VLIATILVVPSCAFLILQQITPRYTATGALIYQASDYQGPARLEPITEATMASQAEVL
                     QSLRIGQRVADRGNLYADPDFNAALRPPGALRRAWSTLRLLLGMEEDDEPTDPATGPM
                     RDRSRELTLLAVQAALRAAPVRFSHVLPGG"
BASE COUNT          225 a          391 c          431 g          210 t
ORIGIN      
        1 tccctccagg aaggacatgg gaaaaccgca ccggggcggc acgcagcgcc gcctggacgg
       61 ccagcagggt cagctcgcgc gagcggtccc gcatcggccc ggtggccggg tcggtgggct
      121 catcgtcctc ctccatgccc agcagcaggc gcagcgtgga ccaggcgcgg cgcaaggccc
      181 ccggaggccg cagcgctgcg ttgaaatccg gatcggcata caggttgccg cggtcggcca
      241 cgcgctgccc gatccgcagg ctttgcagca cttcggcctg gctggccatg gtggcctcgg
      301 tgatcggctc caaccgggct ggaccctggt agtcgctggc ttggtagatc agcgcgcccg
      361 tcgcggtata gcgtggggtg atctgctgca ggatcaggaa ggcacacgac gggacgacca
      421 ggatcgtcgc gatcaggacc aggcggcgct gacggatgac cgacaggaaa ccgggcagac
      481 catcctgcca ggtcccgtgc tggtggtccg ggcgaggtgg ccaggcggtg gccgatggct
      541 cgctcttgag gtccgttggg ctgtcaggca tccgcgatga tcagcctttt tcgatcgtgc
      601 ccagacgctt ttgtctgccg gcgggtgacg aagaccattg tggtacgtct gaaatgctta
      661 agatttcgct aacagggcca ggatttgggg gaatcgcatc gaaagaccgg ctgtgaccgc
      721 agggatgacg tccatggcgt aagacagcgg ggtacgcggc acgatcgctc ccacactgtc
      781 atggccgggc tgatccccgt ccgggctatc gccacaggca cgcgccgcga cagatggccc
      841 ggacgagtgt ttggtccgga aacatatctg acagatgttc agggacatcg ctgacacctg
      901 cgcggtgtca gctgtatccg tggccgtcct tcgatgggat cgacagattc agcgacaacg
      961 acatgtcggc gccatgcttc ggacgcggcg cggcggtcaa gccccgccgc cccgcagggg
     1021 tgcgcggcag gtgcagggct tgacggccgc gctgccggcc ggagcacact caagccagtg
     1081 cgtcgatcgc gcaacaagag tgtcaacgat gttcccgaat acccgtcagg gatgtatctg
     1141 gtctgtacaa caagccgagc catgacggtg aggcagcggc ctgtgccgca caatccttct
     1201 tcaaccgtca gcttatcctt acacacatgg ggacacgccc ggccatgacg gagaggc
//
LOCUS       DASRPQ010000704         1940 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3528190, whole genome shotgun sequence.
ACCESSION   DASRPQ010000704 DASRPQ010000000
VERSION     DASRPQ010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1940)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1940)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1940
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3528190"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            338..967
                     /locus_tag="VFD73_08165"
     CDS             338..967
                     /locus_tag="VFD73_08165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HZI73993.1"
                     /translation="MATDEEQRAFDGISRRSVLRGGLLAGAGVATVGAMSVLTGTANA
                     ATPNPQPGWGYCIYCRIMWWVKGQPNIGCPGNLGGNHAVAAGYYNYELYNNISGLNNK
                     SNPQPGWRWCKNCHGLFWGGKSGHCYAAYNVGPHVAGSGTSYDTYWNLGGHSDPQPNW
                     RWCQNCSLLYWQGASGTEAGYCPILDPNLNYQHLAGSSTNYNLYWNGTW"
     gene            complement(1662..>1940)
                     /locus_tag="VFD73_08170"
     CDS             complement(1662..>1940)
                     /locus_tag="VFD73_08170"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HZI73994.1"
                     /translation="MGWTTEGYVELFCGGRTSPEEIGAAVRRYPEVVDACTVTGEADA
                     LVHIRAADVRHFEDVMERIRAEPFVVRTKSVIVLSRLVDRPGALAPPR"
BASE COUNT          392 a          639 c          604 g          305 t
ORIGIN      
        1 attcacccac aacctggtca agatcagcgc ccttgccagc tgacccgctc cgcccggacc
       61 gggaatgccg ccagtaccgc gccccaagat cagccttcga ctttttcagt cgaagtaatt
      121 taggcccggc ggccggcgca ggcgcctgaa aatcgccgcg tcgtggccac gggctgaggt
      181 aatcaccacc ggctggcagc gtcacagcca ggaacgaagg agatatccgg ggttgacgca
      241 acatgatagg aggccgatac tcatcttcga ccagggcatc aacgcgaaga acgattcgcg
      301 ccggacgaga cgatgctaac gcgaagggac ggcaagcatg gcgaccgatg aggagcagcg
      361 ggccttcgac gggatcagca gacgcagcgt gctgcggggc ggattgctag ccggggcggg
      421 ggtggccaca gtaggcgcga tgtccgtcct caccgggacc gcgaacgcag ctacccccaa
      481 cccgcagccg ggctgggggt attgcatcta ctgccgcata atgtggtggg tcaaaggcca
      541 gcccaatatt ggctgccccg gcaacctcgg cggcaaccac gctgtggctg ctggatacta
      601 caactacgag ctttacaaca acatcagtgg cctcaataat aaatccaacc cgcagccggg
      661 ctggcgctgg tgcaaaaact gccacgggct gttctggggc gggaaatcgg gtcattgtta
      721 cgcagcctac aatgtcggcc cccacgtagc ggggtccgga acctcctacg acacctattg
      781 gaacctaggc ggccattccg acccgcagcc gaactggcgc tggtgccaaa actgctcttt
      841 gctgtactgg caaggggcat caggaacaga ggctggctac tgccctatcc tggaccccaa
      901 cctcaactac cagcacctcg ccgggagcag cacaaactac aacctctact ggaatggcac
      961 ctggtgacat cgccaccgcc ggtactggac cggcggggcc cgtagcagac gtaataggcg
     1021 atctcggccg ggtcgctgac cgagcagcgg gctagcagtc acgagggctc cgggttgtct
     1081 tgtggccgat gcgtgcccaa ccgggagcgt tcggcttccg ctcaccgtca cggcccgcga
     1141 gctgggcagc ggctagcgct cgacgtggac acgcaacccc gggtgcgtgc cgggtgagcc
     1201 tggttgatct ggggcgtggt aggcgtgggg ccgacgcgcg gcaggccggg ccttccgagg
     1261 cagaggccgg gcgctggcgt cggcccgcgg cgccgcttgc ggtgccgcct tgatccaaaa
     1321 cggtccaact cggcaacgga tcagcttacg taaatcccag agagatattc acgaccacga
     1381 agacctagcc cacccttgca agtcatggga atgtcagggt tgccagcggc cgcaaccgcc
     1441 cgaaccggac aaaacgccca acggtccagt catactcaac agacttaaaa gcctatctga
     1501 gcagcgattt tagcgtcttg atccgcgtta cggttggttg cggatgaagg cttgccaaac
     1561 tccgacatgt gcacgacctt agctggtcag gacccgcctg aaggtccgat tcggcgcaac
     1621 gacagcacgg cgctcacaac acggcgctca caacacggcg ctcatcgcgg gggcgccagc
     1681 gcgcccggcc ggtcgaccag tcgggacaac acgatcacgc tcttggtcct gaccacgaac
     1741 ggctcggcgc ggatgcgctc catcacgtcc tcgaagtgcc tgacgtccgc ggccctgata
     1801 tgaaccaggg cgtcggcttc cccggtgacc gtgcacgcgt ccaccacctc ggggtaccgg
     1861 cggacagccg cgccgatctc ctcgggcgag gtgcgcccgc cgcagaacag ctcgacgtat
     1921 ccctcggtcg tccagcccat
//
LOCUS       DASRPQ010000705         1024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2275679, whole genome shotgun sequence.
ACCESSION   DASRPQ010000705 DASRPQ010000000
VERSION     DASRPQ010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2275679"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          165 a          358 c          317 g          184 t
ORIGIN      
        1 gccccggcgg acgggtttgg ctcagtcacg acccctgcct atcgatgcgt tagttaacag
       61 gcggtgctca gtgctctccg gctggccggg aggttagtta cggacagtgc aggccatgat
      121 atctctgccc aggcttacga ccgccgaccc cgcctcccgc ggagcgcgcc ccccgtgaag
      181 acaacgaaac catccccgga ttcgtgcctg gttcgcccgc ggccgggcca ggaaaccgag
      241 acggccgtca aaccgggaaa gaaaaggacc cgggcagcgc cttcggaccg gagtccgtcc
      301 cgttggccac gggcttggtc cccgttgtct actgggtgcc cgggcccttt ccaggcccaa
      361 ccccccgtcc agccggatga acgcggcaag cccttcgtgc ccgtcctgtg ccacgcctag
      421 cccaggggcg gctggctgcg ggcgcccctg ccatggcata gcccggacct gatcagcatg
      481 ccggtccggc tagcgagccc ggtgctggac tgatcagcaa cttacccctg atcccggcaa
      541 tgtcaaccgt caaccctgct gtcagactac cgagagccaa tccatgacta cagtttgtaa
      601 cgattgagcg gttcggctgg atcagaggct accggtcaag ctgaccagcc cgtggcgggc
      661 gggccgcaga gcctgggctg cgtggagctt ccgcttgccg cggcagctca ggcgtggccc
      721 tacctcacct acggctcgct ggtcacggtc agccgttagt tgcctcaggg gtctatacct
      781 ttcgcgcgcg gcgaggaaaa ataggcagcg tctgccctct tgcgtgtggt gctttcgggg
      841 tatggatcac ccacttagct tctcccgatg tccgcccggc cgcccttcgg ccggccttcg
      901 gctcccctgg aggtgattgc atggatggca gcgccgaccg cttcctcgac ctgatgcacc
      961 agctggagga cttcacccgc tcggtatcgc ccgagcaggc gcacactcag ttcgacgaga
     1021 cgac
//
LOCUS       DASRPQ010000706         2423 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4471045, whole genome shotgun sequence.
ACCESSION   DASRPQ010000706 DASRPQ010000000
VERSION     DASRPQ010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2423
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4471045"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1048
                     /locus_tag="VFD73_08175"
     CDS             <1..1048
                     /locus_tag="VFD73_08175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73995.1"
                     /translation="NLPHWARNLDTFGTPLGPAKLGAPDAQNDQLTNEAISPEILLSN
                     VVRNLALHAGTPSGRVNRALTSAVVRGHAWLGLSVTDQRSTRLDPKTPYEIMGKPNDP
                     DRTGNPLHLALILLTIGRIAISKTLRRTPYLARFGAALGTAFLLFCLMLKWQPWNSRL
                     HLPLFVLASPLVGATWGTVPGVMWVATILLAAGATPSLLRNKLAPLVGRHTIFDTPWL
                     DQMFYSFRGHSSSTERAYVAAAQVIGRHNCGDVGLILGWNDWEDPLWKLIRAPMGHIR
                     RIEHVAVQNRSAALASSYPGFTPCAIVVGDVSVNSPIRLDAHSYSPSHVEDDLSVYII
                     DDTASSENTRQSER"
     gene            1052..1459
                     /locus_tag="VFD73_08180"
     CDS             1052..1459
                     /locus_tag="VFD73_08180"
                     /inference="COORDINATES: protein motif:HMM:NF020397.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HZI73996.1"
                     /translation="MKKTNNSKSNETASQLIDAQLKELKDWRGETLSRVRRLIKQADP
                     GVVEELKWKKPSNPAGVPVWSHNGQICTGETYSSVVKLTFFKGAQLKDPKRLFNSSLE
                     GNTRRAIDLHQGDRIDEAAFQALIREAVALNES"
     gene            complement(1875..2150)
                     /locus_tag="VFD73_08185"
     CDS             complement(1875..2150)
                     /locus_tag="VFD73_08185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI73997.1"
                     /translation="MPELIESTESVGAATEPPGNEVRRARWTRTHTIWTLIVLSLLPA
                     GVIAMYRGHWLELPAGVKGAVYLTSAMLIVAVVALIISGGDRRSDNS"
BASE COUNT          502 a          772 c          722 g          427 t
ORIGIN      
        1 gaaccttccg cactgggcga gaaatctgga cacgtttggg acgcccctcg ggcccgccaa
       61 actcggcgcc cccgacgccc agaatgacca actgaccaat gaagccatct cacccgagat
      121 cctgctgtcg aacgtcgtca gaaatctcgc cctgcacgca ggaacgccct ctggccgagt
      181 gaatcgggcc ctgacaagcg ccgttgtccg gggacacgca tggctggggc tttcggtcac
      241 ggatcagcgc agcactcggc tcgaccccaa gacgccgtac gagatcatgg gtaagccgaa
      301 cgatcccgat cgaaccggaa accctctcca cctggcgctg atcctgttga cgatcggccg
      361 gatcgccatt tctaaaacac tacggcgaac accatacctt gcgcgcttcg gcgctgccct
      421 cggcaccgcc tttctgcttt tctgcctcat gctcaaatgg cagccttgga acagccgcct
      481 gcaccttccc ttattcgtgc tcgcatcacc tctggtgggc gccacgtggg gcactgtgcc
      541 cggagtgatg tgggtggcca cgatcctgtt agccgccggt gcaacacctt cgctgcttcg
      601 caacaagctt gccccattag tcggccggca tacgatcttt gacactccgt ggctggacca
      661 aatgttttat tcattcaggg gacattcgag cagcacggag cgcgcttacg ttgcagcagc
      721 gcaggtcatc ggcagacaca actgcgggga tgtggggctc atacttggct ggaacgattg
      781 ggaagatcca ctctggaagc tcattcgcgc gccgatgggc cacatcaggc ggatcgaaca
      841 cgtcgccgta cagaaccgct ccgctgctct ggcgagctca taccctggct tcacgccctg
      901 cgcgatagtg gtcggagacg tgtcggtgaa ttctccgatc cgactcgatg cgcattccta
      961 tagcccgtcc catgtcgaag atgacctgag cgtctatatc atcgacgata ccgcaagcag
     1021 cgagaacact cggcagtcgg aaaggtagga gatgaagaag accaacaact ccaaaagcaa
     1081 tgagacagcc tctcagctca tcgacgcaca gctcaaggag ctgaaagact ggcggggcga
     1141 gacactctcc cgagttcgcc gactgatcaa gcaagctgac cccggggtcg tcgaggagtt
     1201 gaagtggaag aagccctcga atccggcggg ggtgccggtc tggtctcaca acggacagat
     1261 ctgcaccggc gagacttata gcagcgtcgt caagctgacc ttcttcaagg gtgcgcagct
     1321 caaggatccg aagcggctgt tcaactccag tctcgagggc aacactcggc gtgcgatcga
     1381 cctgcaccag ggcgaccgga tcgacgaggc tgcgttccag gcactcatcc gcgaggccgt
     1441 tgccttgaac gagtcctgag gccagtagta actaatctcg gctcctccac ttgcctgcta
     1501 gttcgcagaa ttagcgactg gcatgtggct cctccgagca ctgcagcccc tccgtaagga
     1561 tctgaacccg gcgctggtgg cggctccgga ggggcgcgtc agcatgagag gaggagattg
     1621 tcctgccccg ccgccccggt gccccgctcc agcaccccgg caaccgcacc aggatcagca
     1681 ccaccaccag atcttccacc acaagccaac ccccaccacg atcctgccgt tgagcgactg
     1741 cagcagtccg cgggtttcca gggcgcgcag cagtaccccc gtgctgccac aacccgggag
     1801 agtggtgcta caagctagga gatgaggtgc ggagagaaac cgggcaggtt acctgcccgg
     1861 ttcgagtcga aaggttacga gttgtcggag cgcctgtcgc ctccactgat aatcagcgcg
     1921 acgaccgcca cgatgagcat cgcagaggtc agatagaccg cgccctttac tccagcaggc
     1981 agctccaacc agtgaccgcg atacatcgcg atgacgcccg ccggtaacag gctgagaacg
     2041 atgagcgtcc agatcgtatg cgtccgggtc caccgggcac gccgaacctc attgcccggc
     2101 ggctccgttg cggcaccgac cgattcggtg ctctcgatta attccggcat gattcctcct
     2161 caggtgtcct cgccgcttga gcgcgggtca cccggcacag tggttctgat cgaaatgaga
     2221 acgggatgct gacttggaag tcagctcaga tcaactgtgc ccgcggaggg gggccggttg
     2281 gaaacagcgg gaagtggcgt gcggtgcggg cgagcgcgtc gcgaccggag agaatggggg
     2341 cctcgagaag ccgctgttcg agtacatgcg cctggagatc gcccgaaact gctgcgaagg
     2401 aaggcccgcc agggcgatgc gac
//
LOCUS       DASRPQ010000707         1199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3528881, whole genome shotgun sequence.
ACCESSION   DASRPQ010000707 DASRPQ010000000
VERSION     DASRPQ010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3528881"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..395)
                     /locus_tag="VFD73_08190"
     CDS             complement(<1..395)
                     /locus_tag="VFD73_08190"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI73998.1"
                     /translation="MPNDMQEAVALAHLSVATGSGDDDEEVNIPWPTVSDGMPRLLPV
                     PSAWCETPAVTTRALSARPEEARTARRFVREILTCWGLEALADDAEMIVDELVVNAVL
                     HGTRAGLTRPSPGAGLTVLRLCMLRRAGEV"
     gene            637..894
                     /locus_tag="VFD73_08195"
     CDS             637..894
                     /locus_tag="VFD73_08195"
                     /inference="COORDINATES: protein motif:HMM:NF016070.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF397 domain-containing protein"
                     /protein_id="HZI73999.1"
                     /translation="MVITYNGMLAAELGEVCWQKSWHSNPNGECVELAALPSGEIAMR
                     NSRFPAGPILLYTQAEITAFLAGAKDGEFDHLTGGTNHLTR"
BASE COUNT          240 a          382 c          364 g          213 t
ORIGIN      
        1 acctcgccgg cccgcctgag catgcacagc cgcagcacgg tcagcccggc tccggggctc
       61 ggccgggtca ggcccgcccg cgtcccgtgc aggacggcgt tgaccactag ctcgtccacg
      121 atcatctcgg cgtcgtccgc cagcgcctcc aggccccagc acgtcagtat ctcccggacg
      181 aaccggcggg cggtcctggc ttcttccggc cgtgcgctca gcgcgcgggt ggtaaccgcc
      241 ggggtctcgc accaggccga aggcacaggc agcagccgtg gcatgccgtc acttaccgtg
      301 ggccagggaa tgttgacttc ctcgtcgtca tccccgctac cagtagcgac actgagatgc
      361 gccaacgcaa cagcttcctg catgtcattg ggcacgaaaa cccttgccca tcacggtgtt
      421 aactgcgtgc ttaaagacat gctgcctgat atattgtgca aatgcaagac cagatgcacg
      481 ttcattcgct ttgtgcacag gtctccgagt aggcgcatag ggggccggca gacaggcaga
      541 acgcatcagg caacttgctc accagttgtc aactgaagac tacagcgagt gaaaagcctg
      601 gcctgacatg cgttaccctg tcggaagggg ataaacatgg tcattaccta caacggcatg
      661 ctcgccgcgg aactcgggga ggtgtgctgg cagaagagct ggcacagtaa cccgaacggg
      721 gagtgcgtcg agctggccgc gctgccgagc ggtgagatag cgatgcgcaa ctcgcgtttc
      781 ccggcgggcc ccatcttgct ctacactcaa gcagagatca ccgcattcct ggcgggagcc
      841 aaggatgggg agttcgacca tctaaccggc ggaacaaacc atcttactcg ctagtaacag
      901 tgctaccgtc cggcaagcgg cgactcgagg gttaaagcct ggcaaactgg tatctttcga
      961 cctgcgcaaa cgcggaggga tcacgacatc ctttgaatag tcacatatcc cccttccgta
     1021 agcgcgagat cacgtgggag actggtccac accccgccag gatctcaggg tgcgacgatg
     1081 cgaggagtgc cgatggtctc gtctgaagac tcggcctggg atgttccccc cagcattttt
     1141 ggcacgcgcg cgggcggtcc gaccgtccag cggctggtgc tcggcagcca gctgcaccg
//
LOCUS       DASRPQ010000708         3193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3224741, whole genome shotgun sequence.
ACCESSION   DASRPQ010000708 DASRPQ010000000
VERSION     DASRPQ010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3193
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3224741"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..624
                     /locus_tag="VFD73_08200"
     CDS             <1..624
                     /locus_tag="VFD73_08200"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="reversible synthesis of carbamate and ATP from
                     carbamoyl phosphate and ADP; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HZI74000.1"
                     /translation="VVTLITQTLVDRYDPALSQPTKPIGHSLSEQEAARLREQGRAVG
                     RDGAGQWRRMATSPLPLGVVEFPVIQRLLDAGALVVAAGGGGPPVYQDPILGLEGVDA
                     VVDKDRVSSILATQLGAEVLMILTNVEAVYEGWGTPKARPVRHMTVEQAEQMIAAGAL
                     DAGGMKPKMEAAAAFVHRGGKRAIIARLSDGPAALRGETGTTITRTV"
     gene            621..1760
                     /gene="sucC"
                     /locus_tag="VFD73_08205"
     CDS             621..1760
                     /gene="sucC"
                     /locus_tag="VFD73_08205"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HZI74001.1"
                     /translation="MNLHEYQARLLLKAAGIPMFDGDVASTPTEAESIARRLGGNVVI
                     KAQVHAGGRGKAGGVKLARNPNEALEYAAEILGMQIKGLVVHKVLVVPAAEIATESYL
                     GLIMDRETQRPVFMVSSAGGVDIEEVAAKTPEKIVRLPVDPTYGLLPHQALTLGFALY
                     SDFNQVKAAARIMEQLYTVFTGNGCSLAEINPLVTTPSGQVLALDAKIVIDDNELFWR
                     PDLGLMRDDSAEEPSEAAARRANLSFIKLEGDVGCVVNGAGLAMATMDLVKYYGGEPA
                     NFLDIGGSSSPEKVINALKIITADRRVKAILFNIFGGITRTDDVANGIVAATRQFKVK
                     VPIVIRLTGTNETEAIRILEGVGMTALSDMDEAVQRVVALARKAA"
     gene            1757..2644
                     /gene="sucD"
                     /locus_tag="VFD73_08210"
     CDS             1757..2644
                     /gene="sucD"
                     /locus_tag="VFD73_08210"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018287377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HZI74002.1"
                     /translation="MSIFVDRETRLVVQGITGREGAFHTRQMLEYGTAVVAGVTPGKG
                     GQKFESTVPVFNTVAEAVRQTGANCSVIYVPPMAAAGAIFEAVDAGIPLVVCITEGIP
                     VMHMSRVMPFVRAHGARLIGPNCPGLITPGEAKVGIIPGNICTPGRIGLVSRSGTLTY
                     EVVNQLTRNGIGQSTCVGIGGDPIIGTDFIACLEAFQDDADTDAIVMIGEIGGTDEQR
                     AADFVKQRVSKPVVGFIAGQTAPKGRRMGHAGAIISGSSGTAEEKLAAFEAAGIGIMR
                     RPADVVALLEQRLSALSKR"
     gene            2655..3089
                     /gene="ndk"
                     /locus_tag="VFD73_08215"
     CDS             2655..3089
                     /gene="ndk"
                     /locus_tag="VFD73_08215"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HZI74003.1"
                     /translation="MAGTLTLAIIKPDAIASGKTGAILAHLQQAGFVPRAARLVRLTR
                     PQAGAFYEVHRGRPFYAELVEFMTSGPCLPIALERDDAVSQLRSVIGATDPAEAAPGT
                     IRKLFAESKGKNAIHASDSPENAVREVGFFFSEGELAQLWGT"
BASE COUNT          593 a          971 c         1068 g          561 t
ORIGIN      
        1 gtcgttaccc tgatcaccca gacgctggtg gaccggtacg atccggccct cagtcaaccg
       61 accaagccga tcggtcattc gctctccgag caggaggccg cgcgtctccg ggagcagggc
      121 cgcgcggtcg gacgggatgg ggcgggacaa tggcgccgga tggcaaccag tcccttaccg
      181 ctgggtgtag tcgagtttcc cgtaatacag cgcctgctcg atgccggtgc gctcgtcgtc
      241 gctgcaggcg gcggcggccc tccagtctac caggacccga ttcttgggct ggagggagta
      301 gacgccgtgg tcgacaagga ccgggtctct tcgattctgg caactcagct cggagccgaa
      361 gtcctgatga ttctgaccaa cgtcgaggcg gtgtacgagg ggtggggcac gccgaaggcg
      421 cgacctgtcc gccacatgac ggtggagcag gctgaacaga tgatcgctgc cggggccctc
      481 gatgccggag ggatgaagcc caaaatggag gcagcagctg cgtttgtgca ccggggcgga
      541 aagcgcgcta tcattgcgcg cctgtcggat gggcctgccg cgctgcgagg ggaaacgggg
      601 accaccatca cgaggacagt gtgaatctcc acgaatacca ggctcggctc ctgctgaagg
      661 ccgcgggcat tcccatgttc gacggtgatg tcgcctcgac tccgacggag gccgagtcga
      721 ttgcccggcg cctgggtggc aatgtggtga tcaaggcgca ggtgcacgcc ggtgggcgag
      781 ggaaggccgg cggcgtcaag ctcgcccgca accccaacga agccctggag tacgcggcgg
      841 aaattctcgg tatgcagatc aagggcctag tggtccataa ggtgttggtc gtgcctgccg
      901 cggagattgc caccgagagt tatctgggac tcatcatgga tcgggagacc cagcgccccg
      961 tgttcatggt cagctcggcg ggcggcgtag atatcgagga ggttgccgcc aagaccccgg
     1021 aaaagatcgt tcgcctcccg gtcgacccta cctatggact gctgccccat caggccctca
     1081 ccctgggatt cgccctttac agtgatttca accaggtcaa ggccgcagcc cgtatcatgg
     1141 agcagctgta taccgtgttt accggcaacg gctgctcgct tgccgagatc aatccgctcg
     1201 tcaccacccc ttccggtcag gtgctcgcgc tggatgcgaa gatcgtcatc gatgacaacg
     1261 agctcttctg gcggcccgat ctcgggctga tgcgcgacga ttctgccgag gagccgagcg
     1321 aggcggcggc gcgtcgcgcc aatctgtcgt tcatcaagct ggaaggtgac gtcgggtgcg
     1381 tggtgaacgg agccgggctc gccatggcca ccatggatct ggtgaagtat tacggcggtg
     1441 agccggccaa ctttctggat attggcggca gctccagccc ggagaaggtg atcaatgcgc
     1501 tcaagatcat caccgccgac cgccgggtga aggcaattct gttcaacatc ttcggcggca
     1561 tcaccagaac cgacgacgtg gccaacggca tcgtcgccgc cacccgtcag ttcaaggtca
     1621 aggtgcccat cgtgatccgc ctgaccggaa ccaacgagac cgaagccatt cgcattctcg
     1681 aaggtgtcgg catgactgcg ctcagcgaca tggatgaggc ggtgcagcga gttgttgccc
     1741 tggcccggaa agcggcatga gcatctttgt cgatcgagaa acccgcctgg tggtccaggg
     1801 gatcaccgga cgcgaaggcg cgttccacac ccggcagatg ctcgagtatg gaaccgcagt
     1861 cgtggccgga gtgactccgg gaaagggagg gcagaagttc gagtccacgg tgccggtctt
     1921 caacacggtg gcagaggcgg tccgccagac cggcgccaat tgctcggtca tctacgtccc
     1981 gcccatggcg gcggctgggg ccatcttcga ggcggtcgac gctggcatcc ctctggtggt
     2041 gtgcattacc gagggaattc cggtgatgca catgagccgc gtcatgccgt tcgtgcgcgc
     2101 tcacggcgcc cggttgatcg ggcccaactg tcccggactg attacgccgg gcgaggccaa
     2161 ggtcggcatc attccgggaa acatctgcac gcccgggcgg atcggcctgg tctcccgcag
     2221 cgggacgctc acctacgaag tggtcaatca gctcacccga aacggcatcg gccagagtac
     2281 ctgcgtcggg atcggcggcg acccgatcat cggcaccgat ttcatcgcct gcctggaggc
     2341 gttccaggac gacgccgaca ccgatgccat cgtgatgatc ggtgagatcg gcggcaccga
     2401 tgagcaacgg gccgcggact ttgtgaagca gcgggtgagt aagccggtgg tcggattcat
     2461 cgccgggcaa accgccccca agggtcgacg gatggggcac gccggtgcca tcatctccgg
     2521 ctcgtccggc accgccgaag agaagctcgc tgctttcgaa gcggccggca tcggaatcat
     2581 gcggcgtccg gcggacgtgg tggcgctgct ggaacagcgc ctgagtgctc tcagtaaacg
     2641 gtgaaggagg cggtgtggcg ggaactctga cgctcgcaat catcaaaccg gacgccattg
     2701 ccagcggcaa gactggtgca atcctggcgc acttacaaca agccggcttc gtacctcggg
     2761 cggcccggct ggtgcggctg acccggccgc aagccggcgc tttctacgaa gtgcaccgcg
     2821 ggcgtccgtt ctacgcggag ctggtcgagt tcatgaccag cggtccctgc ctgcccatcg
     2881 ccctggagcg agacgatgcc gtaagccagc tgaggtcggt catcggcgcg actgatccgg
     2941 cggaggcagc tccgggcacc atccgcaagc tctttgcgga atcgaagggg aagaacgcca
     3001 tccatgcctc cgatagtccc gaaaacgcgg tgcgagaggt cggatttttc ttcagcgagg
     3061 gcgaactggc ccagttgtgg ggcacatagc ggcgacttga tctatcttat tgtccccgtt
     3121 acgttaagcg gctatgctgc gagtagacat ccgcgacctt cagaagggtc cggtgcgaac
     3181 tgatggagag ctt
//
LOCUS       DASRPQ010000709         1377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2602368, whole genome shotgun sequence.
ACCESSION   DASRPQ010000709 DASRPQ010000000
VERSION     DASRPQ010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1377
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2602368"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(294..1057)
                     /locus_tag="VFD73_08220"
                     /pseudo
     CDS             complement(294..1057)
                     /locus_tag="VFD73_08220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611628.1"
                     /note="programmed frameshift; incomplete; partial in the
                     middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT          255 a          448 c          421 g          253 t
ORIGIN      
        1 gggcagttta tgcgaaagta gattaggtag aggcacagcc gtgtgagagt gcacgtcgcg
       61 caaacgacct ataagcacgc actccaacac ttcacgccgg agatgacgga cgggagatgc
      121 ccgcaagcgg caggaagaag ccgaaatggt cgggaaggcc ctgtagccct ggctttcttg
      181 aaagccactt tccagcgctg agttttgtaa gagtggtgtt ggagatcttg ggagcggttc
      241 tcgcccacaa tcgtcttgtc cgcgtcacgt ccatgtttta gggcctgttc ggacttgagc
      301 caatcgagag cggcagcgag gcagaggatg cccatgaagc tggaggccgt cttctcatag
      361 cgggtcgcaa tcgcgcgcca ctctttcagc cgcgcccaga gccgctccac ttggttgcgg
      421 ttggtataga tccactccgg acaggcgact ggggcttcgt tttgtttgga cgggatcgcc
      481 ggacgcgcgc cacgctccca gatgtgctcg cggaaggcgt ggctgctgaa accccggtcc
      541 gccacgaccc actggggtac ccctggcagg cgctccagga gcgggacggc ctgcgggagt
      601 tcatgcgcct gcccgggagc cagaatgaag gccaccgccc gtccaagccc gtcggcaatc
      661 acgcaggcct tggtgccgta gccgccacgc gaacggccca gtgcttcacg ctcatcgcgc
      721 tctttgctgt cgaccccctt ttttccgcgc ccgccgcctt gtggtgagcc cggatgctgg
      781 tgccgtccag aaacgtcatg ccaagctgga ccccgcgctc ctgggccagg agcagcagct
      841 tctcccacac gccgaggtgg gcccagcgga tgaacatctg agccgcccgc gaccagggac
      901 ccaggtccgc ggggatggcg cgccacttgg ccccgttctc atgccgccag aggatggccg
      961 acagcgtgcg ccgcaggtcc tggggcgggg tcttgccctt gggccggcac gcctcgatca
     1021 gcggctccag gtccatccat actccgtccg tcagcatcgc tcctcctccc atcaggagga
     1081 gcaaaacgcc cgtcatcaca accggttcaa gcgcgaacag gccctagtga aaaaggtcta
     1141 aaacacgacc ctagtcttcg attaccgcag cgcccgcctg gatcatggcg tcagtaatct
     1201 caatttcgct aacgtcggag cgcccggcct gtctcgcctg agatgatgcg tcggacattc
     1261 gtcgtcagat atataatcgc cgcgcatcct cctccgagac gtgccagcac cgctggccga
     1321 tgacgatcgc caattcgact tcccaatcga gcttggtcga tcccgggggc aggatga
//
LOCUS       DASRPQ010000710         2510 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1649671, whole genome shotgun sequence.
ACCESSION   DASRPQ010000710 DASRPQ010000000
VERSION     DASRPQ010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2510
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1649671"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="VFD73_08225"
     CDS             <1..238
                     /locus_tag="VFD73_08225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74004.1"
                     /translation="PGFNFDQISRGYDHTHHSQSDTYDKAVEGDLKQAAAVMAVTAVE
                     LANLPELLSRGPKSPVQPMPTKPSAGVATKVSRR"
     gene            complement(239..1087)
                     /locus_tag="VFD73_08230"
     CDS             complement(239..1087)
                     /locus_tag="VFD73_08230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74005.1"
                     /translation="MRTSGASPDPDGYTVRLGDRPGQPVAVNGTLVFPALADGNYSVL
                     LSGIAANCAVQGPNPRPIAVLGSSVSVDFAVTCEQAGPPPPPPPSSKDLSVSPDSAVA
                     GSPDLTVTLTGTGFAHRPHFFSVVKWSVGQQTIALPSTFVSDRQLTTVIPAILLGHPI
                     VARIVVETGDPMSDLPPASVGAAFTVTPAPPPSGTGTILVYGIQRSPGPPWRLEIREV
                     SLDGSAWRPFAAGDSVFYRNVPAGDHQLRISNPCTGSHAPTVLAVTLLNGETKTVGAS
                     IYSACE"
     gene            1396..>2510
                     /locus_tag="VFD73_08235"
     CDS             1396..>2510
                     /locus_tag="VFD73_08235"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterial transcriptional activator
                     domain-containing protein"
                     /protein_id="HZI74006.1"
                     /translation="MFRLATFGGLSLAGRDGATIAVQRLRLALLTLLAQAGDRGLSRD
                     KLLGLLWAESPPDSARHKLEQALYMLRRQLDDALFIGTDPVRLNSEILRADVTDFEQA
                     LKQGDLATAVSLYRGPFLDGFYVGRAEEFERWTESERSRLAQQYRLVLEQLATRADAA
                     GEPAVALGWWRKLAAQDPLSSRATMGVMRALAASGDRSAALRQAEIYDQLVRDELESD
                     PDPAVLSLVEELRAPSAMPVRSAKGGGKDVVQGIAALPPPAAGEPQSWPAERRRSRLA
                     VTLPAAGAAAVLLALTLRHQTQTRATTVSAAAHRIVIVPFQVATPDSSLTYLREGMVD
                     LLAAKLTGEVGPTAVDPRTTLSAWRRATSVGETKNQPA"
BASE COUNT          447 a          806 c          819 g          438 t
ORIGIN      
        1 gcccggcttc aacttcgacc agatctcccg ggggtacgac cacacccacc attcgcagag
       61 cgatacctac gacaaggcgg tggagggcga tctcaagcag gcggccgccg ttatggcggt
      121 caccgcagtt gagctggcga atctcccgga acttctgtcg cgtgggccca agagccccgt
      181 ccagccgatg cccaccaagc catcggctgg agtggcgact aaggtaagtc ggcggtagct
      241 actcacaggc gctatatatg gatgccccca cggttttcgt ctcaccgttc agcaacgtga
      301 cggcgaggac tgtgggggca tgactgccgg tacacggatt cgagatccga agctgatgat
      361 ctccggcagg aacattccgg tagaacacgg agtcacccgc cgcgaacggg cgccaggcag
      421 aaccgtccag cgaaacctcc cgaatttcca gcctccaagg tggacccggg ctcctctgga
      481 tgccgtagac caggatagtg cctgtccccg acggcggcgg ggctggagtg actgtaaagg
      541 ccgccccaac ggaggcgggt gggaggtccg acatggggtc accggtttca acgacaattc
      601 gggcaacgat gggatggccc aggaggatcg ctgggatgac ggtggtcagt tgacggtcac
      661 tcacgaaggt tgatggcagg gcgatggtct gttgtcccac cgaccatttc accacactga
      721 agaagtgcgg tcggtgggca aacccggtcc cagtcagagt caccgtcaag tcagggctac
      781 ccgcgaccgc gctgtcgggc gagaccgata ggtctttgga tgatgggggc ggcgggggcg
      841 gtggtcccgc ctgctcacac gttactgcga aatcaaccga gacactcgag ccgagaacgg
      901 cgatcgggcg ggggttgggt ccctgaactg cgcagttcgc agcgattccg gaaagcagca
      961 cactgtagtt gccgtcggcg agggccggga agacgagtgt accgttcacc gctaccggct
     1021 gaccggggcg gtcgcccaaa cggacggtgt agccgtcagg gtccggcgaa gcaccgctcg
     1081 ttctcacgtt cacctgaata tttgagctgg gtccgaggct atcgccgccg cacccgatgc
     1141 agaagagcca ggccgcaaac gtggctgtcc tcctcggagt tgacagccag gtgggtagac
     1201 gatggggcgt gcacataccg aaatcctcca agtgagtacg ggaccggccg tgagaaattg
     1261 tccggcgaaa ctgcggccga ccgctcatcc caagctcacc tggtgctcat ctgaaccttc
     1321 ttgctcgctc ccgccccgtc gggtacactt ttcctcatcc cgctatccct tcacacgctg
     1381 ggttcggttc gaccaatgtt tcggctcgcg acattcggcg gcctcagtct ggctgggcgg
     1441 gacggggcga cgattgccgt tcaacggcta cggcttgcgc tccttaccct cctggcccag
     1501 gccggcgacc gcggcctctc tcgcgacaag ttgctcggcc ttctctgggc cgagagtccg
     1561 ccggacagcg cccggcacaa actggaacag gcgctgtata tgctgcgccg ccagttggac
     1621 gatgcgctct tcatcggcac cgatccggtt cggctgaatt ccgagatcct gagggccgac
     1681 gtcaccgatt tcgaacaggc gctgaaacag ggtgacctcg cgacggcagt ctccttgtat
     1741 cgcggtccat tcctggacgg cttctacgtt ggccgtgccg aagagttcga gcgatggacg
     1801 gaatccgagc gtagccggct ggctcagcag tatcgattgg ttctggaaca gctcgccacg
     1861 cgcgccgacg ctgcgggaga accggctgta gctctgggtt ggtggcggaa actcgccgcg
     1921 caagatcccc tgagctctcg ggcaacgatg ggagtcatgc gtgccctggc agcctcgggc
     1981 gatcgctcag cggcgctccg ccaggccgag atctacgatc agctcgtgcg cgacgagctg
     2041 gagagcgacc ctgatccggc ggtgctttcc ctggtagagg agctacgagc tccctcggcg
     2101 atgccggttc gtagtgccaa ggggggcggc aaagatgttg tgcagggcat cgcggcgctg
     2161 cccccgcccg cggcgggtga gccccaatct tggcccgccg agcgtcgccg ttcccggctg
     2221 gccgtcaccc tgccagccgc cggtgccgcc gccgtactgc tggcgttgac cctgcggcac
     2281 caaacacaga ctcgggccac cacggtttct gcggccgccc accgaatcgt gatcgttccc
     2341 ttccaagtcg cgacccccga ctcatctctc acctacttgc gcgaggggat ggtcgacctg
     2401 cttgcggcca agctcaccgg cgaggtgggg cccaccgcgg tagatccgag gacgacgctg
     2461 agcgcctggc gccgcgcgac ttcggttggc gagacgaaga accagcccgc
//
LOCUS       DASRPQ010000711         1054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2276711, whole genome shotgun sequence.
ACCESSION   DASRPQ010000711 DASRPQ010000000
VERSION     DASRPQ010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2276711"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..862)
                     /locus_tag="VFD73_08240"
     CDS             complement(join(93..550,550..862))
                     /locus_tag="VFD73_08240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611628.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZI74007.1"
                     /translation="MLTDGAWMDLEPLIEACRPKGKTPPQDLRRTISAIVWRHENGAK
                     WRAIPADLGPWSRAAQMFIRWAHLGVWERLLLLAQEHGVQLGMTFLDGTSLRAHHKAA
                     GAGKKGATSQARDEREALGRSRGGYGTKACVIADGLGRAVAFILAPGQAHELPHAVPL
                     LERLPGVPKWVVADRGLSSHAFREHVWSLGARPAIPSKQNEAPVACPEWVYNNRNYVE
                     RLWARLKEWRAIATRYEKTARSFMGVLCLAATLDWLKT"
BASE COUNT          173 a          366 c          324 g          191 t
ORIGIN      
        1 tcttccgcga tcgaggagcc tgatgatgtc cgcgccattc agagcgcatg gccgcgccga
       61 tcaggccagt cgatcctacg tgctagggcc tgttaggtct tgagccaatc gagagtggcc
      121 gcgaggcaga ggacgcccat gaaggagcgg gccgtcttct catagcgggt ggcaatggcg
      181 cgccactctt tcagccgcgc ccagagccgc tccacgtagt tgcgattgtt gtagacccac
      241 tccgggcagg ccaccggagc ttcgttctgt ttggacggga tcgccggacg cgcgcccagg
      301 ctccagacgt gctcgcgaaa ggcgtgactg ctcaagcctc ggtccgccac cacccacttc
      361 ggcaccccgg gcaggcgctc cagaagcggg accgcatggg gcagttcatg agcttggccc
      421 ggcgccagga tgaaggccac cgcccgtcca agcccgtcgg cgatcacgca cgccttggtc
      481 ccatagcccc cacgcgagcg gcccagcgct tcacgctcat cgcgcgcctg gctggtggcc
      541 cctttttttc cgcgcccgcc gccttgtggt gagcccggag gctggtgccg tcgagaaacg
      601 tcatcccgag ttggaccccg tgctcctggg ccaagagcag cagccgctcc cagacaccca
      661 ggtgggccca gcggatgaac atctgagccg cccgcgacca gggccccagg tccgccggga
      721 tggcccgcca cttggctcca ttctcatgcc gccagacgat cgccgagatt gtacgacgga
      781 gatcctgggg cggggtcttg cccttgggcc ggcacgcctc gatcagcggc tccaggtcca
      841 tccatgctcc gtccgtcagc atcgccctct cctcattcca ggaggggcaa aacgcccgcc
      901 atcataatca gttcaagctc gaacaggccc tagcacgtca tggtggctta tggctttgat
      961 ctacacgctc gctgcgagct gtcgccttcg ggacatgggt tggccagcaa agtatgcgct
     1021 gctcttggcg ctagctcctt tgctcttgaa gaat
//
LOCUS       DASRPQ010000712         1005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3225064, whole genome shotgun sequence.
ACCESSION   DASRPQ010000712 DASRPQ010000000
VERSION     DASRPQ010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3225064"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..>1005)
                     /locus_tag="VFD73_08245"
     CDS             complement(93..>1005)
                     /locus_tag="VFD73_08245"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HZI74008.1"
                     /translation="ITETKLEFSKLGSRIGAEIRGLDLSGDLSPETVAEIRSALNEHK
                     ALVFREANILSDEAQVKFASHFGPLTKAHPTVASVEGEENVLPVDSENGSANNWHTDV
                     TFVVNPPQASTLRSIDLPSYGGETLIASSAGAYQDLPDELRNFADTLWAIHTNDYDYS
                     VPKNLEHANAEERRKEFTRLKFETAHPVVRVHPLTGERGLFIGGFAQRLRIVGLSNTE
                     SRDIIRLLQAYVTRPENVVRVNWEPNQLVLFDNRITQHYAPDNYDGQPRKLNRVTIAG
                     DIPVGVDGKQSQALQGDASTYSEIASV"
BASE COUNT          157 a          296 c          353 g          199 t
ORIGIN      
        1 acatccctta aaaccgaacc gggccgcagt tgttgtcgtt atgaacctac aagacgacaa
       61 caactgcggc ccgggttccg ggctggacaa ccttagacag aggcgatctc cgagtacgtg
      121 gaggcatcgc cctgcagggc ctggctctgc ttgccgtcca cgcccaccgg gatgtccccc
      181 gcgatggtga cgcggttgag cttgcgcggc tggccgtcgt agttgtccgg tgcatagtgc
      241 tgggtgatcc ggttgtcgaa cagcaccagc tggttgggct cccagttcac acggaccacg
      301 ttttcgggcc gcgtgacgta cgcctggagc agccggatga tgtccctgga ttcggtgttg
      361 gacaggccaa cgatccgcag ccgctgcgcg aagcccccaa tgaacaatcc gcgctcgccg
      421 gtcagggggt ggacgcgcac caccgggtgg gccgtctcga acttgagccg ggtgaactcc
      481 ttgcggcgct cttcagcgtt ggcgtgctcg aggttcttgg gcacggagta gtcgtaatcg
      541 ttggtgtgga tggcccacag ggtgtcagcg aagttccgca gctcgtccgg caggtcctgg
      601 tacgcgcccg ccgaggaggc gatcagggtc tctccgccgt aggacggcag atcgatgctg
      661 cgcagggtgg acgcctgcgg cgggttgact acgaacgtga catccgtgtg ccagttgttg
      721 gcggagccgt tctcgctgtc caccggcagg acgttttcct cgccctccac ggatgcgacg
      781 gtggggtggg ccttggtgag cgggccgaag tggctggcga actttacctg ggcctcgtcg
      841 gagaggatgt tcgcttcacg gaacaccagc gccttgtgct cgttgagggc cgagcggatc
      901 tccgcgacgg tttcggggga caggtcgccg ctgaggtcca ggccgcggat ctcggcgccg
      961 atgcgggagc ccagcttgga gaattcgagc ttggtttcgg taatg
//
LOCUS       DASRPQ010000713         2490 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1970519, whole genome shotgun sequence.
ACCESSION   DASRPQ010000713 DASRPQ010000000
VERSION     DASRPQ010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2490
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1970519"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1004)
                     /locus_tag="VFD73_08250"
     CDS             complement(<1..1004)
                     /locus_tag="VFD73_08250"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HZI74009.1"
                     /translation="MAVVIRGQQHERNLTPKMTSLKVLRTQTETKRFRRQGHDDRSRP
                     GPVDPDSLAAELRKQIRGEVRFDPGSRGLYATDGSNYRQVPIGVVIPRDMDDVIHTVA
                     IARQFGAPILSRGGGTSLAGQCCNAAVVMDFSKYMHRVLEIDASKKLARVEPGCVLDD
                     LRNAAEQYHLTFGPDPETHNHCTLGGMLGNNSCGVHSLLSHKAGLGLRTSDNTQSLTV
                     LTYDGLGLEVGPTSPEELEHIIRGGGRRGEIYRKLRDLRDRYADDIRRRFPKIPRRVS
                     GYNLDDLLPENGFNVARALVGTESTCVTILQATLHLVPSPQARSLLILGYPDVFSAGD
                     "
     gene            complement(950..2272)
                     /gene="larA"
                     /locus_tag="VFD73_08255"
     CDS             complement(950..2272)
                     /gene="larA"
                     /locus_tag="VFD73_08255"
                     /inference="COORDINATES: protein motif:HMM:NF033504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050043 - lactate racemase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent lactate racemase"
                     /protein_id="HZI74010.1"
                     /translation="MKIDFPYPGYEKIAPVEVPDANLMGVFSPKTFDSDETAVLRRGF
                     EHPIGAPRLRDAVRSGDRVLILIDDGTRMTPVAQILPQLFDELHAGGVPDDHIEFLQA
                     PGTHRPMTQDEIREKLGSFAGRYPVHEHHYLDEASLHHFGHTRDGTPVTANKLLKQVD
                     FVLGVGSIVPHRVKGLSGGAKIAFPGVAGREMMDRNQWEASMHMSETVMGVPENPMRL
                     RMEEAAEMAGLRYIVNVVYDIRRRIVGCFTGDVVQAHREGCKLSREVYAAHMPTRADI
                     VLIDSHSADRDFWQSAKGPYAGTMAVKDGGSLILVSPNPEGVASNHKNLLEIGYKPHA
                     EIVQLVQQGKVDDLVGVAILADVCQIVDKTDCIMVSPGVTREEAQKIGFRYARSAEEA
                     LRMAFERQGKQASVAVLRYGGHILPVVDDEAWQLSSEGSSTSETSLRK"
BASE COUNT          421 a          784 c          784 g          501 t
ORIGIN      
        1 tgatcgccag cggagaagac atcgggatag ccgagaatca agagcgaccg tgcctggggg
       61 ctgggcacca gatgcagcgt cgcctggagg attgtgacac aggtgctctc ggtgccgacc
      121 agtgcgcgtg cgacgttgaa cccgttctcc ggcaacaggt cgtcgaggtt gtacccggag
      181 actcggcgcg ggatcttggg aaaccggcgc cggatgtcat cggcatagcg gtcgcgcagg
      241 tcccggagct tgcggtagat ctcccctctg cgtccgccgc cacgaataat gtgctccagc
      301 tcctccgggc tggtgggccc cacctcgagg cccaagccgt cgtaggtgag cacggtcagg
      361 ctttgcgtgt tgtcggaggt gcgcaggccg aggccggcct tgtggctcag gagcgagtgc
      421 actccgcagg agttatttcc cagcatcccg cccagcgtgc agtgattgtg agtctccggg
      481 tcagggccga aggtcagatg gtattgctca gctgcgttcc gcagatcatc cagcacgcag
      541 cccggctcta cccgcgcgag cttcttgctg gcatcgattt ccagcactcg gtgcatgtac
      601 ttggagaaat ccatcaccac ggcggcgttg cagcattgtc ccgcgagact ggtgccgccg
      661 ccgcgggaga ggatcggtgc cccgaattgt cgggcgatgg caaccgtgtg gatgacgtca
      721 tccatgtccc gggggatcac taccccaatc ggcacctggc ggtagttgga gccgtcggtc
      781 gcatagagcc cgcgacttcc ggggtcgaac cgcacctcgc cccggatctg tttccggagt
      841 tcggcagcca gcgagtccgg gtctaccggc ccgggccggc ttcgatcatc gtgcccctgc
      901 cgccggaagc gtttcgtctc ggtctgtgtt cgtaaaactt tgagactggt cattttcgga
      961 gtgaggtttc gctcgtgctg ctgccctcgg atgacaactg ccacgcctcg tcatccacga
     1021 ccggcaggat gtggccgcca taccggagta ccgcgacgga ggcctgcttt ccttgccgtt
     1081 cgaacgccat ccggagcgcc tcctctgcgc tcctggcgta ccgaaatcca atcttctgtg
     1141 cctcctcacg ggtgactccg ggcgagacca tgatgcagtc ggtcttatct acgatctgac
     1201 acacgtctgc caggatggct acgccgacca ggtcgtccac cttgccctgc tggaccagct
     1261 gtacgatctc ggcgtgcggc ttgtagccga tctcgagcag attcttgtgg ttgctggcta
     1321 ctccctcagg attgggcgag accaggatca gcgagccgcc gtccttcact gccatggtgc
     1381 cggcgtaggg tcccttggcc gattgccaaa agtcccgatc ggcggaatgt gaatcgatga
     1441 ggacgatgtc ggcgcgggtg ggcatgtggg cggcgtagac ctcgcgggag agtttgcagc
     1501 cttcccggtg ggcctggacc acgtccccgg tgaagcagcc gacgattcgg cgtcggatgt
     1561 cgtacaccac gttcacgatg tagcggaggc ccgccatctc cgccgcctct tccatccgga
     1621 gccgcatggg gttttccggc actcccatga ccgtctccga catgtgcatc gaggcttccc
     1681 actgattgcg gtccatcatc tcgcggccag ctacgccggg aaatgcgatc ttggctccgc
     1741 cggacaggcc cttgacccgg tgcggcacga tcgagccgac accaaggacg aaatcgacct
     1801 gcttcagaag cttgtttgcg gtgactggag ttccgtcgcg ggtatgaccg aagtgatgga
     1861 ggctggcctc atcgaggtaa tggtgttcgt ggaccggata gcgtcccgcg aaagagccca
     1921 gcttttcccg gatctcatcc tgagtcatcg gccggtgagt gccgggcgcc tggaggaact
     1981 cgatgtgatc gtctggcact ccaccggcgt ggagctcgtc gaacagctgg ggcaggattt
     2041 gagcgaccgg ggtcatccga gtgccgtcgt cgatcaggat cagcactcga tcgcctgagc
     2101 ggaccgcatc tctcaacctt ggcgcgccaa tcggatgctc gaacccgcgc cgcagcactg
     2161 cagtctcgtc gctgtcgaag gtcttggggc tgaacacccc catcaggttg gcgtcgggaa
     2221 cctcgaccgg cgcaatcttc tcatatccgg ggtaaggaaa atcgatcttc acggcacgtc
     2281 cgtttttctg gccggtcagc cggtcagccg ggcacacggt caactgcgca ggagagaccg
     2341 accgaccgtc cgaccgccta ccgatgcggc aaatagttct ccaccatctc cttcaccgac
     2401 tgcttgacca tatcccatcc gcccgaatcg cctttgacaa tcgcctgggc atacgctttg
     2461 gcctgatcga aggtgatgtg gggtggcaac
//
LOCUS       DASRPQ010000714         1145 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1970562, whole genome shotgun sequence.
ACCESSION   DASRPQ010000714 DASRPQ010000000
VERSION     DASRPQ010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1970562"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..648
                     /locus_tag="VFD73_08260"
     CDS             <1..648
                     /locus_tag="VFD73_08260"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI74011.1"
                     /translation="AKKLLGRADPEQRQAFAERLRDALAGAQRDQHLLVYLDEAHIHQ
                     DADLGYGWAKRGQRFWVASSSPGLSARVSVYGLYLYNEGQVRLWPFPRANGDHTIDVL
                     RRLRAEAPDRQVIVLWDGAPYHRAKTVREAARALNITLMPLPGYSPDLMPVEALWRWL
                     REDVTYHHCHASTEDLTRRVADFEARLNREPFVIADRLWVKDCLDPEEEKLRFPN"
     gene            844..1029
                     /locus_tag="VFD73_08265"
     CDS             844..1029
                     /locus_tag="VFD73_08265"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZI74012.1"
                     /translation="MTATLIGYARCSTDKQDLAAQKVALERLGVAPERIYTDHGLIGT
                     NRSRPGLDQALAAADQH"
BASE COUNT          206 a          384 c          357 g          198 t
ORIGIN      
        1 gccaagaagc ttctgggacg ggccgatccg gagcagcggc aggcctttgc cgagcggctc
       61 cgggatgcgt tggccggcgc ccaacgcgac cagcatctgt tggtctacct ggatgaggca
      121 cacatccacc aggacgcgga tctcggctat ggctgggcca aacgcgggca gcggttctgg
      181 gtcgcctcaa gctcgccggg cttgtcggcg cgtgtctcgg tctatgggct gtatctctac
      241 aacgagggcc aggtacggct ctggcctttc ccgcgcgcca acggcgacca cacgatcgat
      301 gtcctgcgcc ggctgcgcgc cgaggctcct gatcgccagg tgatcgtgct ctgggacggc
      361 gcgccctatc accgggccaa gaccgtccgg gaggccgcga gggccctgaa catcacgctc
      421 atgccgctgc cgggctacag ccctgatctg atgccggtgg aggcactctg gcgctggctg
      481 cgcgaggatg tcacctacca tcattgtcat gccagcaccg aggacctgac ccggcgggtg
      541 gcggacttcg aggcgcgctt gaaccgagag cccttcgtca tcgccgaccg cctctgggtc
      601 aaggattgcc tcgacccaga ggaggagaaa ctgcgcttcc caaactagac tcggtttagc
      661 tcgctgtcca caactctgtg aagccatttt ctggacaggt cgcagcaagg cgtacggaag
      721 ggatcggcca gcggacgatc cgaccgcggc ggccaagggt tgcaaaacca agcgggccag
      781 cgtctcacaa agatggtacg ctgacgctat cactgagggg aggtgtaacg tacacgtgtc
      841 cccatgaccg caaccctgat cggctacgcc cgctgctcga ccgacaagca ggacctcgcc
      901 gcccagaagg tggcactcga acggctcggc gtcgctcctg agcggatcta cactgaccat
      961 gggctgatcg gcaccaaccg gtcccgcccc ggccttgatc aggcactcgc cgccgcagac
     1021 caacattgac catagctgtt gtgcggttgc cacggggtcc gctccctcac ccacgtacca
     1081 tgtcgaaccc gacgatgtcg ccgttcccat caattttgca ggttgcccgc ttggcaccgt
     1141 tgaca
//
LOCUS       DASRPQ010000715         1372 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_399098, whole genome shotgun sequence.
ACCESSION   DASRPQ010000715 DASRPQ010000000
VERSION     DASRPQ010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1372
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_399098"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VFD73_08270"
     CDS             <1..180
                     /locus_tag="VFD73_08270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74013.1"
                     /translation="LPIIMRLLGHESTSTTAAFYAFATLDMMREAVNAATPAIASSAA
                     ERLTEGTLEALCSRR"
     gene            370..624
                     /locus_tag="VFD73_08275"
     CDS             370..624
                     /locus_tag="VFD73_08275"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HZI74014.1"
                     /translation="MGSKGDSYDNAAAEALNSLYKRELIDPRKDWQGVDDVMLATMDW
                     VQWYNEDRIHSYSGDMPPKKYEEIYYQALETGKLTSSSQT"
     gene            complement(715..786)
                     /locus_tag="VFD73_08280"
     tRNA            complement(715..786)
                     /locus_tag="VFD73_08280"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(748..750),aa:Gly,seq:tcc)
BASE COUNT          268 a          424 c          425 g          255 t
ORIGIN      
        1 ctgccgatca tcatgcgcct gctcggccac gagagcacct ccaccaccgc agcgttctac
       61 gcgttcgcca ccctcgacat gatgcgagag gccgtcaacg cagcaacccc cgccatcgcc
      121 agcagcgccg ccgaacggct caccgaaggc acactcgaag ccctctgcag ccgtcgatag
      181 gaccaatcgt taagccgagg aagcaggcag gaaacccctc acccgcaggc cagttcccga
      241 ttccccggct taacaccaac ctcggcataa tcggaattaa gccggatccg gcttaattcc
      301 gaccgcggcg tccagtatac gtctatccgt tatgccgagc ggctcgccga ggaaaaggca
      361 gtccggtcag tgggaagcaa gggcgattcg tatgacaatg ctgccgcgga ggcactgaac
      421 agcctttaca agcgcgagct catcgacccg aggaaggact ggcagggagt cgatgacgtg
      481 atgctcgcga caatggactg ggtccagtgg tacaacgagg accggatcca ctcatatagc
      541 ggtgatatgc cgccgaaaaa gtacgaggaa atctattatc aggcgctgga aactggtaaa
      601 ctaacgagca gttcgcagac atagcggcct ccagacttgc cggggcgaac caggctcgct
      661 gctattctgc ggcattccca aagggacgtg aatgtggcta tcacctgcga gagcagatga
      721 cgggaatcga acccgcatga ccagcttgga aggtgtatgg cgctcggctg tcaaggcggc
      781 tgagctgggc ggttcgttgt ccgctggtgg ccgtgattga ccgctgttta ccgggttaat
      841 ggcctgctaa tggcccggac gggacgtggg ttttgcctgc gtgtggacac ctgccaagcc
      901 gtggccgagc cagttggcgg gctcttgatc cgtagcttcc cgtaccggcg tccggtgccg
      961 tccagatcgg tccgtgacct cggcagggtc tgaccgcgtt gtccatgtaa gtccggtcag
     1021 cgacgaggtt gtccgtcccg tgactcccag cgtggctccg atccggcgac gatctgatcc
     1081 gtaggagcgg gccggtcgtc cacatccgtc tgcctgtgcg cttcacctgt gcgcgcgttc
     1141 cacagcagtc gccacatctc gacttccatt cgccgtcgtg gcggcaggcg gccactctgg
     1201 caagggccgc gggggacagt caccgcttga gcgcttatgc cgactcgaac acggtccatg
     1261 aattgtctcg gcgtactagc agcgatcgcg tgagcagacg gttggggttc gctgtcgggc
     1321 gttcccacgc gcggcgagct gcataacgta gtgtctctac gccgccggga at
//
LOCUS       DASRPQ010000716         1794 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2277399, whole genome shotgun sequence.
ACCESSION   DASRPQ010000716 DASRPQ010000000
VERSION     DASRPQ010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1794
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2277399"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1005)
                     /locus_tag="VFD73_08285"
     CDS             complement(<1..1005)
                     /locus_tag="VFD73_08285"
                     /inference="COORDINATES: protein motif:HMM:NF018743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1343 domain-containing protein"
                     /protein_id="HZI74015.1"
                     /translation="MHRFSLLGLLSCLGCASASNGSVPPSSSQRERPDVRPGIEVLLS
                     DSARLVRHRAVGLVTNQTGVDANGISDVTRLRAAGVGLVALFSPEHGFRGAADPGAAV
                     ASSKDSATGLPIYSLYGRTSAPTPQMLQGIDLMLVDLQDAGARYYTYLATTVEVMRAA
                     GRAHLPVIVLDRPNPIGGAVQGNVLDPAFSSTIGLLEIPMRHGMTLGELSRLALADLR
                     IDAALTVIPAEGWRRSLALDEIDLPFVPPSPNLRSMESLYHYPGLCLFEGTNLSVGRG
                     TDRPFEQIGAPWLDSTAVLTALRRARLPGVRFSGVQFVPHQPGDGKYADTALVGIRLV
                     V"
     gene            1000..>1794
                     /locus_tag="VFD73_08290"
     CDS             1000..>1794
                     /locus_tag="VFD73_08290"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HZI74016.1"
                     /translation="MHRKHLTLIAVSFALGACGRPAPVSTPQPSQFPPQQPAAELEVN
                     DVLQSLSLRDKIAQLIMPWVGGGYTAFDDDAFLRMQDWVDSLHVGGLIISIGSPYDIA
                     AKLNRLQQRSKIPLLIGSDLEGGTAVRLNGGTPFPPNMGVGASGSDSDAYEVGRVTAL
                     EGRAVGIHLAFAPVADVNNNPENPIINTRSFGEDPQAVGRLVAAEIRGLQEHGMLATA
                     KHFPGHGDTGTDSHIALPVIFSSWARLDSVELVPFKSAISAGVTSIM"
BASE COUNT          337 a          565 c          578 g          314 t
ORIGIN      
        1 taccacgagc cgaatgccga ccagggccgt gtcggcatat ttgccgtcgc ccggctggtg
       61 aggaacgaat tgaacccctg agaaccgaac tcccgggagg cgggcccggc ggagtgcggt
      121 gagcacagcc gtcgagtcga gccagggagc cccgatctgc tcgaacggac gatccgtacc
      181 ccgaccgact gaaagattgg tgccctcgaa caagcagagc cccgggtagt gatacaggct
      241 ttccatactg cggaggttcg gacttggcgg aacgaacggt agatcgattt catccagtgc
      301 cagggaacgg cgccagccct cggccggaat gacggtgagt gccgcgtcga tgcggaggtc
      361 ggccagagcg agccgtgaca gctcaccgag ggtcatgccg tgccgcattg gaatctcgag
      421 gaggccgatg gtggacgaaa atgctggatc gagcacgttc ccctggactg cgcccccgat
      481 ggggtttggg cgatcgagta ctatgacggg caggtgcgct ctcccggcag cgcgcatcac
      541 ctccacagtc gtggccagat aggtgtagta ccgagctccc gcatcctgca gatccaccag
      601 catcaggtct atgccctgaa gcatttgagg agtgggggca gaagtccggc cataaaggct
      661 gtagattgga agcccagtgg ccgaatcttt cgatgacgca accgcagcgc cagggtcggc
      721 cgccccccga aacccatgct ctggactgaa gagcgccacc agcccgacac cggccgcgcg
      781 taagcgggtc acgtcgctga tcccgttggc atccacgccc gtctgattgg tgaccaagcc
      841 aactgctcgg tgacggacca atcgcgcgct atcgctaagg agcacttcga tgccgggacg
      901 cacgtccggc cgctcccttt gggagctgga aggcggcaca ctgccgttgc tcgcgctggc
      961 gcagcccaga caactcagca gtcctagcag ggaaaatctg tgcaccgcaa gcacctcacg
     1021 ctgatcgcag tctcattcgc actgggggcg tgtggacgac cggcaccggt ctcgactccg
     1081 caacccagcc agttccctcc ccagcagcct gcggctgagc tggaggtgaa cgatgtgctc
     1141 cagtccttgt cgctccgcga taagatcgct cagctcatca tgccgtgggt aggaggtggg
     1201 tacactgcgt tcgacgacga cgcctttctc cggatgcagg actgggtcga ctccctgcac
     1261 gtcggcgggc tgatcatttc gatcggctca ccttatgaca tcgcggccaa gctgaaccgg
     1321 ctgcagcagc gctccaagat cccgctcctg atcggttccg acttggaggg cggtaccgcc
     1381 gttcgcctca atggggggac gccgttccct cccaatatgg gtgtgggcgc cagcgggagc
     1441 gactccgatg cctacgaggt tggccgggtg acggctctgg agggacgagc ggttggaatt
     1501 catctggcat tcgcgccggt ggcggatgtg aacaacaatc cggagaatcc gatcatcaac
     1561 actcgttcct tcggagagga cccccaggcg gtggggcggc tggtcgccgc cgagatccgc
     1621 ggactgcagg agcacgggat gctggcgacg gcgaaacatt ttcccggcca cggtgatacc
     1681 ggcaccgact cccatatcgc gctgccggtc atcttctcca gttgggcccg gctcgattcg
     1741 gtggagctgg tccccttcaa gagcgcgatt tccgccggag tcacctcgat catg
//
LOCUS       DASRPQ010000717         1036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1023371, whole genome shotgun sequence.
ACCESSION   DASRPQ010000717 DASRPQ010000000
VERSION     DASRPQ010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1023371"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..332
                     /locus_tag="VFD73_08295"
     CDS             <1..332
                     /locus_tag="VFD73_08295"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HZI74017.1"
                     /translation="DGGAEFVLTYEPPDPPDPGVTFLSGDIGEAVATALRAAGGKNLE
                     ILGADVAGQCLRRGLVDEILVYVLPVLLGDGTRFFSSPGLARIDLEPLESTRSGAVTV
                     LRFRVRK"
BASE COUNT          168 a          322 c          358 g          188 t
ORIGIN      
        1 acgacggggg agctgagttc gtcctcacct acgaaccacc ggacccgccg gacccggggg
       61 tcacgttcct cagcggtgat atcggggaag ccgtcgccac cgcgctgcgc gcggcgggcg
      121 gcaagaacct cgaaatcctc ggtgctgacg tggccggtca gtgcctgcgg cgggggctcg
      181 tggacgagat cctggtgtac gtcctgccgg tactgctcgg cgacggcact cgctttttct
      241 cgtccccggg cctcgcccgg atcgacctgg aaccgctcga gagcacacgg tcgggagccg
      301 tcaccgtcct tcggttccgc gtccgcaagt agtccgggcc tacgccgtct cagcgtgctt
      361 tgacaccaat gacgcgggga gtcataattc gcgcaaagtg accggatgct ccagcatctg
      421 gtcatggagg ctgagctgtc tgggctggca gggagactca atctttccgc gccccggagg
      481 ctcttcctcc ggggctttcg cgtttcgggg caagcgcggc tgaagacgcc gagcggccga
      541 ggacggagcg cggcggaggt gtcagagatg atcactctga agcacctggt gctgggtgcc
      601 ggtgccatcc ggacgaggcc ggggccctat ctggaaagct ggcccaagat cgtcctgttc
      661 gttgtcgtag tcgcggttct agggggagtc gtcgcgatat ggaaccgcac tcactacacc
      721 cctagcacag gggtagcgca tccaggggta ggagcgccat gcgaattccg tccagggaag
      781 agcggctggt ccagcgtgca ccgacccgga cgaccgcggt cgtctggccg cgctgtgtgg
      841 cccatcggac gatattgctc tttgctagtg catttcccta gactgagcgg ggctcagcgg
      901 ccggactagg agggcgcatg tcagtcgact gggttgtcat tggcctggat aacggcggga
      961 ccactaacaa cgggaccatc ctcgactcca gcggccggtt cctcctcgac cggatggcgg
     1021 aggtgcccag cgaggt
//
LOCUS       DASRPQ010000718         1078 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1338098, whole genome shotgun sequence.
ACCESSION   DASRPQ010000718 DASRPQ010000000
VERSION     DASRPQ010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1338098"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(701..>1078)
                     /locus_tag="VFD73_08300"
     CDS             complement(701..>1078)
                     /locus_tag="VFD73_08300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74018.1"
                     /translation="DPKIRLGMQPGLAAVATQVRGHRRTQHKMTGRFEASARSREGSH
                     ISPCVTSDDEHQHARSGKSGAPRSALLYPRRSREELGGRFLGLMAYLDPKGEGDQSMP
                     GKQWPCPGVRARGAAGPAEYGES"
BASE COUNT          151 a          375 c          332 g          220 t
ORIGIN      
        1 gtgagcgtgc gcgtcaaccc cactggttac ggtggggact gggtacgcaa gaccctcaca
       61 gatgtcggtg tcccgcccgg ccacgaggac gaggcccgcg cgctggtgga gctgttacgc
      121 cgcgaggtgc tcaacggatc caatcgctag ggtgcaaggc gagtacgcat cgttcggcgc
      181 gccatcgcac cggtaggccg ctggcgaggt gcctgtgatt aggttctttt ccagcggccc
      241 ccggtccgaa cccgccgtgc cggttgtccc ggcaacgggc tctccagcga ccgtcacggt
      301 aggacgagtc aacgactacg cctacgcggg gcatcacgtt ccgtttcggc gcttggcatt
      361 ccgcctacct cccggcttgt gatgcccggt cacctggccc ccttcgccct gtgtccggct
      421 ctcccggacc ccttggccgg tcgcgactcc ggcgactact acgaggcctc cgtcgccata
      481 ggactcgcgt cccgtaggcg atcccgcgtt cgtccctgtc atacgtgtcg agcggaacgt
      541 aggtggccca ctcatctcct tgaatgccct cactgggcat cgcccgcgct ccggaggttg
      601 catcggcaaa tccggaatac cgacgcaggg cacggcaccg gttcagacgt ctttccggtg
      661 gatggcggct tgcatcactg gagattgggc ttcaggcaat tcagctttca ccatattccg
      721 cgggtcccgc agcaccccgc gcccgtacgc ctgggcacgg ccactgcttt cctggcatgc
      781 tctggtcccc ttcacctttc ggatccaggt aagccatcag acccaggaac ctccctccga
      841 gttcctcccg gctgcgccgg ggatacaaca aggcgcttcg tggcgcaccg gatttgccgc
      901 tccgggcgtg ctggtgttca tcgtcgctgg tgacgcacgg tgatatatgg ctgccttccc
      961 tgctcctggc gctggcctcg aaccttccgg tcatcttgtg ctgcgtgcgg cggtgtccgc
     1021 gtacttgggt cgctaccgcg gcgagacccg gctgcatacc gagtcggatc ttcgggtc
//
LOCUS       DASRPQ010000719         2449 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3225828, whole genome shotgun sequence.
ACCESSION   DASRPQ010000719 DASRPQ010000000
VERSION     DASRPQ010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2449
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3225828"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..752
                     /locus_tag="VFD73_08305"
     CDS             <1..752
                     /locus_tag="VFD73_08305"
                     /inference="COORDINATES: protein motif:HMM:NF039287.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HZI74019.1"
                     /translation="IGKGITRFHCVIWPAMLLSAELPVPREVWAHGYVQWEGAKMSKT
                     IGTAVTLDEAIDRHGPDALRYFLLREVGFEADGNFSWERFDERYTAELADGLGNLASR
                     ALAMIVKYRDGRVPSDNTETDLDRTGNAVVERYAVAMDALDLRGGADVTWELVSAANL
                     YVQQTAPWSLAKAGRQKELDQVLASLARALVRLAVLTSPFIPVKAQTLWQMLGSDGDV
                     ASTRWSTATEPPVSGRIVSRAEVLFPKPASV"
     gene            951..1874
                     /locus_tag="VFD73_08310"
     CDS             951..1874
                     /locus_tag="VFD73_08310"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HZI74020.1"
                     /translation="MAKRRWTLVLVPHGSEPSRIVEVSHTVLRAGAVVVGACVVLAGI
                     AGYATISKTSELSRAARLQQENASLSREIGELHGRLVSLSDTITQISQRDARIRVLAN
                     LEPIDPQVQEAGIGGPGTSDLSLSGLTGLTRRSAEVRVDLGALIRRANLLASSFKEAA
                     DSLSVHTARLAATPSIMPTQGWLSSAFSAMREHPILHLARPHEGIDVSAPMGSPIEAP
                     AAGVVSDAGWETGYGNTVTINHGFGIVTKFAHASKILVKVGQRVSRGQRIALVGNSGL
                     ATGPHLHYEVHVNGRPVDPLKYVLPEGVVTD"
     gene            complement(1987..>2449)
                     /locus_tag="VFD73_08315"
     CDS             complement(1987..>2449)
                     /locus_tag="VFD73_08315"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HZI74021.1"
                     /translation="AQGQIQTQLQRRADLIPNLVNTVKGVTKQEDTVFISIANARARL
                     GGAIQSGNVPEMAAANNALSQGLGRLLAISENYPQLRSSENFKQLQDQLEGTENRISV
                     ARQDYNQAVGEYNAYIRRFPYNLTAKVFGMGKPREYFEAAPGAAQAPTVSF"
BASE COUNT          432 a          761 c          756 g          500 t
ORIGIN      
        1 tgatcgggaa aggcatcact cggtttcact gcgtgatctg gcccgccatg ctccttagtg
       61 cggagctgcc ggtcccccgc gaggtctggg ctcacggata cgtccaatgg gaaggcgcga
      121 agatgtccaa gaccattggc acggctgtca ccctcgatga agcgatcgac cgccatgggc
      181 cggacgcatt gcgctacttc ctgctgcgtg aggtcgggtt cgaggccgac ggcaatttca
      241 gctgggagcg attcgatgag cgatacaccg ccgagcttgc ggatgggctc ggcaatctgg
      301 catcacgggc gctcgccatg atcgtgaagt accgggatgg acgggtcccc tctgataaca
      361 cagagaccga tctcgatcgc accgggaacg ccgttgtgga gcgctacgct gtggcgatgg
      421 atgcgctgga cctgcggggc ggtgcggacg taacctggga gctggtctcg gccgccaatc
      481 tgtacgtgca acagactgca ccgtggtcgc tggccaaggc cggccggcag aaggagctcg
      541 accaggtgct cgcctctctc gcacgagcgc tggtccggct ggctgtgctg accagtccat
      601 tcattccagt gaaggcgcag acgctctggc agatgctcgg gtcggatggt gatgtcgcgt
      661 cgacccgctg gagtacggcg acggagccac cggtttccgg acggatcgtg tcccgagcgg
      721 aagtgctgtt ccccaagccc gcaagcgtgt agcagttaaa gtgctttctc tcaaaactat
      781 ttgacagtga aagagttatc actgcaattc ccacttgaca acgcttattc ctttgggcca
      841 ccttaacttt ggctcgtgac tccggtcacg ccaaacaacc tggctactcg tgagattgaa
      901 gcgctggtcc gccgaagcag acgatcacgt tcgttcgagg tccgtagtga atggctaaac
      961 gccgctggac cctggttctg gtaccccacg gctcggagcc ctcgcgtatt gtcgaggtct
     1021 cccacaccgt gctgcgcgcc ggcgcggtgg tggtaggcgc ctgtgtggtt ctggctggta
     1081 tcgccggata cgccacgatc tccaaaacca gtgagctttc ccgggctgcc cgtctgcagc
     1141 aagagaatgc ttcgctctct cgtgagatcg gcgagctgca cggccgcctg gtctccctct
     1201 ctgacacgat tacccagatc tcccaacgcg atgcccggat ccgtgtcctg gccaacctcg
     1261 agccgatcga cccgcaagtt caggaagccg gtatcggcgg gcccggcacc agcgacctga
     1321 gtctcagcgg tctcaccggg ttgacccggc gctccgccga ggtgcgggtg gatctcggcg
     1381 cgttgatccg gcgggcaaat ctgttggctt cttcattcaa ggaagcagcc gacagtctct
     1441 cggtccacac cgcccggctc gccgccactc cgtcgatcat gccgacccaa ggctggctct
     1501 ccagtgcctt ctccgccatg cgggagcatc cgatcctgca cctggcgcgt ccccatgagg
     1561 gcatcgacgt ttcggctcca atgggaagtc cgatcgaagc cccggcagct ggtgtggtca
     1621 gtgatgccgg atgggaaacc ggctacggca ataccgtcac gatcaatcac ggattcggta
     1681 tcgtcaccaa gttcgcccac gcgtcaaaga ttctggtaaa ggtgggccag cgggtctccc
     1741 gcggccagcg tattgccctg gtgggcaact cgggactcgc taccggaccg cacctgcatt
     1801 acgaggtgca tgtcaacggg cggccggtgg atccgctgaa gtatgtgctg cccgagggag
     1861 tcgtcactga ttaagggcgt aaagagcgga cgggcggaaa caagcggaaa caaaccccgg
     1921 tgatcagatg atcccggggt ttaatgttgt tccttccgct tcttccgcag cttccgcttc
     1981 ttcctgctag aagctcaccg tcggcgcttg ggccgctccg ggcgccgctt cgaagtactc
     2041 tcgcggcttg cccatcccga acacctttgc ggtcagattg tagggaaacc gccggatgta
     2101 ggcgttgtat tcacccaccg cctggttgta atcctgccgc gcaacggaaa tgcggttctc
     2161 cgtcccctcc agttgatcct gcaactgctt gaagttctcg ctcgaccgaa gctgaggata
     2221 attctcggag atcgcgagca gccgccccaa tccttgactg agcgcattgt tggcggctgc
     2281 catctcaggg acattgccgg actggatggc gcccccgagc cgggcccggg cgttcgcgat
     2341 cgagatgaac acggtgtctt cctgcttggt gacgcccttc accgtattca ccaggttcgg
     2401 gatcaggtcg gcgcgtcgct gcagttgggt ctgaatctgg ccttgagcc
//
LOCUS       DASRPQ010000720         1255 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_400068, whole genome shotgun sequence.
ACCESSION   DASRPQ010000720 DASRPQ010000000
VERSION     DASRPQ010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_400068"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            55..>1255
                     /locus_tag="VFD73_08320"
     CDS             55..>1255
                     /locus_tag="VFD73_08320"
                     /inference="COORDINATES: protein motif:HMM:NF023742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI74022.1"
                     /translation="MALVSSGTYLLGAAHAASAAPLAVAAPQPINAGKTCVVTATQER
                     LDTAPDLSRDGLSSNSADYTGLHPSPAPSNYRCYADDHSAVAAITGGVLNVPENLHGK
                     AATDWVTEHIASPGTVGSGRGAHVVRVPRYLPTLTNLVAYTYTYTGTNYTGTVTYLVL
                     PVVYLCASPYTGYGYYASLTVNLSSFLVRSVITGKGQKALAFKRGMNGLSRPLTARRL
                     SATSVRVRKTFLYRLYPTKEQQRLLARQLEECRWLWNHLLAERRDAWEQRQETLRLYD
                     QQTTLPMLKAERPALAGVHSQVLQNVAVRLDLAFKAFFRRVQAGEDEPGYPRFRGVGR
                     YDSLTFPQVPVGCRLVESDGQDGRQDSKRHLHIHRVGQIKVVWHRPLDGTPKTATIRR
                     HSTGKWYV"
BASE COUNT          230 a          439 c          371 g          215 t
ORIGIN      
        1 ccctcgcaac gtaccgtccg tcgcctcagc ctcggcgcca gcttattcct cattttggcg
       61 ctcgtcagta gcggcaccta cctcttaggc gccgcccatg ccgccagtgc cgcaccccta
      121 gcggtcgcgg ctccccagcc catcaacgcc ggcaaaacat gcgtcgtcac cgccacccag
      181 gaacggctgg atacagcccc agatctgtcg cgtgacggcc tcagctcgaa ctcggcagac
      241 tacaccggcc tgcatccgtc accggcgccg tccaactacc gctgctatgc cgatgaccac
      301 agtgccgtgg cggccatcac cggcggcgtc ctgaacgttc ccgagaactt gcacgggaag
      361 gcagccaccg actgggtcac cgagcatatc gcctcgccgg ggactgttgg cagcggccgg
      421 ggcgcacatg tcgtcagagt accgcgctac ctgccgacgc ttaccaacct cgtcgcctac
      481 acctacacct acaccggcac caactacacg gggacggtga cgtatctcgt gctgccggtg
      541 gtctacctct gcgccagtcc ctacaccggc tacggctact atgcgtccct gacggtcaac
      601 ctcagctcgt tcctggtgcg ctcagtcatt acaggaaagg gccagaaagc cctcgctttc
      661 aagcggggga tgaatggcct ctctcgcccc ttgacagcgc gccgcctttc tgctacatct
      721 gttcgtgtgc gcaagacgtt cttataccgc ctgtacccga ccaaagaaca gcaacggctc
      781 ctcgcgcggc aattggagga gtgccgctgg ctgtggaatc acctgctggc cgaacggcgc
      841 gacgcctggg agcagcgcca ggagacgttg cgcctctacg accagcagac gacgttgccc
      901 atgctcaaag cggagcgccc agcgctggcc ggtgtccact cgcaggtctt gcagaacgtg
      961 gcggtgcggc tggacctggc cttcaaggcg ttcttccgcc gggtacaggc gggagaggat
     1021 gagccggggt atccgcgctt tcgtggcgtt gggcgctacg acagcctcac ctttccgcaa
     1081 gtaccggtgg ggtgtcgact ggtggagagt gacgggcaag acggcagaca agacagtaag
     1141 cgtcacctcc acatccatcg cgtcggacag atcaaggtgg tatggcatcg cccgctggac
     1201 ggcacgccca agacggccac catccgccgg cacagcaccg gcaagtggta cgtgg
//
LOCUS       DASRPQ010000721         1347 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3530888, whole genome shotgun sequence.
ACCESSION   DASRPQ010000721 DASRPQ010000000
VERSION     DASRPQ010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3530888"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..145)
                     /locus_tag="VFD73_08325"
     CDS             complement(<1..145)
                     /locus_tag="VFD73_08325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI74023.1"
                     /translation="MCRHDLTDEEWQRLLPMMPANARRGRRWSDHRMVVNGIMFRTRT
                     GCPW"
     gene            complement(245..616)
                     /locus_tag="VFD73_08330"
     CDS             complement(245..616)
                     /locus_tag="VFD73_08330"
                     /inference="COORDINATES: protein motif:HMM:TIGR00028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TA system VapC family ribonuclease toxin"
                     /protein_id="HZI74024.1"
                     /translation="MKARQWWEGVVNSDELIGLADPAIFGFLRISTNPRLIKPPLSAD
                     EAARHVETWLELPNVRWAQPGPGHHARSFAYLRAAGTAGNLTTDAQLAAIASDNNAVM
                     CSNDSDFARFDDIRWHNPLTA"
     gene            complement(613..927)
                     /locus_tag="VFD73_08335"
     CDS             complement(613..927)
                     /locus_tag="VFD73_08335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74025.1"
                     /translation="MRTTLTLDDDVALLLAETAHRTRTPVKQIVNTALRAALSPPAAE
                     RAPYREHVHHAELAPGLDLAGFNKLADELEDEAIVRLAQERSSRTSTFCFMRLSTPSP
                     ST"
BASE COUNT          263 a          418 c          445 g          221 t
ORIGIN      
        1 gccacgggca gccagtccgg gtgcggaaca tgatcccgtt gaccaccatc cggtgatcgg
       61 accaccggcg gccccggcgc gcattagcgg gcatcatcgg cagcagccgc tgccattcct
      121 catccgtcag gtcatgacga cacaggcggt catccacccg cattgatcta caccagtcac
      181 gatcaaagct ctacgggaca cgccctagtg ccccacgccc gcggatgacg gtagagacgg
      241 ctagttacgc ggtgagtggg ttatgccagc ggatatcgtc aaagcgggcg aagtcgctgt
      301 cgttggagca catgacggcg ttgttgtcgg aagcaatcgc ggcgagctgg gcatcagtgg
      361 tgagattgcc cgcagtcccg gcagcacgga gatacgcaaa ggaacgggca tgatgcccgg
      421 gaccaggctg agcccagcgg acattaggca gctcgagcca ggtctcgacg tgccgggcag
      481 cctcatcagc ggacagcgga ggcttgatga gccgcgggtt ggtactgatg cgcaggaagc
      541 cgaagatagc cggatccgcc aggccgatca gctcgtcgga gttgacgacg ccctcccacc
      601 actgccgcgc cttcacgtgc tgggggaagg cgtcgataac cgcataaagc agaaggttga
      661 cgtccgggat gatcgctcct gcgccagcct cacgatggcc tcgtcctcaa gctcgtcggc
      721 gagcttattg aacccggcga gatccaggcc gggtgcgagc tcggcgtgat ggacgtgctc
      781 tcgatacggt gcccgctccg cggccggggg ggagagagcg gcacggagcg cggtgttgac
      841 gatctgtttg acgggggtcc gcgtgcggtg cgccgtctct gcaagcagga gagctacgtc
      901 atcatccagc gtcagcgtag tacgcatatc tagcatcata gtgcctgatg atgaaggcat
      961 caagatgcca taacctcggc caagaggtcc cgccggcgaa tccttaggcg tatacgcgca
     1021 ccatgccgtc ggctccgcag ctcgcggcgg ctccgagcgt cggtcctggg acccactgga
     1081 tcgtggtcca ggcaagcgac gccacggcca ggtaaagggc tcccgaagga ttaggtcagc
     1141 gtcggatgga tgagagggtt aggcgcgctc tcgttcagcg gccagtcgta gcagctccga
     1201 ccctgcctgg cgacgagtaa tgctccatct cctcaacccg gaaccggacg aggacgatta
     1261 gcccagcccg gcccagacgt ttgtccagaa atccattact agcccagcgc ctgggtcaag
     1321 ccgccgccga tgagcggccg ggccatg
//
LOCUS       DASRPQ010000722         1319 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_715309, whole genome shotgun sequence.
ACCESSION   DASRPQ010000722 DASRPQ010000000
VERSION     DASRPQ010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1319
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_715309"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..562)
                     /locus_tag="VFD73_08340"
     CDS             complement(<1..562)
                     /locus_tag="VFD73_08340"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI74026.1"
                     /translation="MSNRPGMFRALRNRNYRLFASGQVISLIGTWMQTVAESWLVYRL
                     TGSPLLLGVVGFANRIPVFVFSTLGGAVADRHNRHRIVIATQISSMLLASLLAFLTLT
                     HLVQVWHLMAIATLLGVVNAFDIPGRQSFVVELVGREDLQNAIALNSSMFNGARIIGP
                     AVAGVLVAAVGEGWCFFANAVSYLAVI"
     gene            complement(559..>1319)
                     /locus_tag="VFD73_08345"
     CDS             complement(559..>1319)
                     /locus_tag="VFD73_08345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HZI74027.1"
                     /translation="GPLSVNHSGQLPSVTLSFNLTPGTSIGTAVARVEAAARQVLPST
                     ISTSFAGTAQAFQAAQQGLLVLLILAILVIYLVLGILYESFVHPLTILSGLPFAGFGA
                     LLALTIFNMDLSIYAFVGIIMLIGIVKKNAIMMIDFAIEAERRENTEARNAILEAASV
                     RFRPIMMTTMAALVGTLPIALGHGAGAESRRPLGIAVVGGLLFSQLITLYITPVVYTY
                     LDAWQKRLAHRKSSTARAYPEAAPGEARVAGATR"
BASE COUNT          281 a          412 c          424 g          202 t
ORIGIN      
        1 caatgaccgc aagatagctc accgcgttgg cgaagaagca ccaaccctcg cccaccgcgg
       61 ccaccagcac tcctgccacc gcgggaccga tgatgcgcgc tccattgaac atcgaggagt
      121 tgagggcgat ggcgttctga agatcttccc gccccaccag ctccaccaca aaggactgcc
      181 ggccggggat gtcgaacgcg ttcaccacgc ccagcagggt ggcgatcgcc atcagatgcc
      241 agacctgaac caggtgggtc aaggtgagaa acgcgaggag cgaggcgagc agcatcgatg
      301 agatctgggt ggcgatcacg atccgatgcc ggttgtggcg atcggcaacg gcgccgccca
      361 gggtggaaaa gacgaacacc ggaatccggt tggcgaaccc aacgacgccc agcagcagtg
      421 gggaaccggt gagacgatac accagccagc tctccgccac agtctgcatc caggttccaa
      481 tgagcgagat gacctgaccg ctggcgaaca gccggtagtt ccggttccga agcgcacgga
      541 acatccccgg ccgattgctc atctcgttgc ccctgccacc ctcgcttctc ccggcgcggc
      601 ctccgggtac gctctggcgg tggaagactt ccgatgcgcg agccgcttct gccaggcgtc
      661 gaggtaggta tagacgacgg gcgtgatgta gagcgtgatg agctgggaga acaagagacc
      721 acccaccacc gcgatgccga gcggtcggcg ggattcggcg ccggcgccgt gacccagcgc
      781 gatcggcaag gttccgacca gcgccgccat ggtcgtcatc atgatcggcc gaaaccggac
      841 gctggcagct tccaggatgg cgttcctcgc ctcggtgttt tcccgccgtt cagcttcgat
      901 cgcaaaatcg atcatcatga tcgcgttctt cttcacgatt ccgatcagca tgatgatgcc
      961 gacgaaggcg tagatgctga gatccatgtt gaagatcgtc agggcgagca acgccccgaa
     1021 cccggcgaag ggcagcccgg aaaggatcgt gagcggatgg acgaagctct cgtagagaat
     1081 gccgagcacc aggtaaatca ccagaatcgc cagaatgagg agcaccagga gcccctgctg
     1141 ggcggcctgg aatgcctgag cggtgccggc aaagctggtg ctgatagtcg acggcagcac
     1201 ctgccgcgct gccgcctcga cccgcgcaac ggcggtaccg atcgaagtgc ccggcgtcag
     1261 gttgaacgac agcgtgaccg aaggcagctg tccggagtga ttgaccgaga ggggtccgg
//
LOCUS       DASRPQ010000723         1018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_86371, whole genome shotgun sequence.
ACCESSION   DASRPQ010000723 DASRPQ010000000
VERSION     DASRPQ010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86371"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(256..537)
                     /locus_tag="VFD73_08350"
     CDS             complement(256..537)
                     /locus_tag="VFD73_08350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74028.1"
                     /translation="MSTAMMDTPYSRFADRYGLAYDEVLDCVNWLSGEREARPATWDT
                     LTVAARERLIIMIGPGIDRRRLTELRTWQPASLRARRVTADVRFSTQDG"
     gene            complement(537..707)
                     /locus_tag="VFD73_08355"
     CDS             complement(537..707)
                     /locus_tag="VFD73_08355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74029.1"
                     /translation="MARKPRRLVDCDDEELQALIDFQLSTAADATDSCEHEEAERRKR
                     RAETFKKLLASL"
BASE COUNT          171 a          304 c          321 g          222 t
ORIGIN      
        1 gggcggctat gcgctcgtac ccgacggcaa tatccagcat cgcccgcttg gcctccagat
       61 caacaatctt ctccgccatg gcgcgtgcct cggcggcgcg ggtaagccaa tggtttggat
      121 cgttcgaaat cgcgtgcggc acggccagcc cccactgaac cgaaactgag agtaacaaca
      181 aggagaccgg agccgcaagg cacccgttca cctccggttg cactctccag aggcggtggc
      241 cgaaaacacc ggcttttacc catcctgggt tgaaaagcga acgtccgcgg tcacccgccg
      301 ggctctgaga cttgcgggct gccacgtccg cagctctgtg agcctgcggc ggtcgatgcc
      361 tgggccgatc atgatgatga gccgctcgcg ggcggcgacc gtcagagtgt cccaggtggc
      421 tggccgggct tcacgttcac cgctgagcca gttgacgcag tcgaggacct cgtcataggc
      481 gaggccgtac cggtcggcga agcgggagta tggggtatcc atcatggcgg tactcactac
      541 aaactcgcca agagcttctt gaacgtttcg gctcttcgct tacgccgctc tgcttcttcg
      601 tgctcgcagc tgtcggtggc gtcggcagcc gtggagagct ggaagtctat cagggcttgc
      661 agctcttcgt catcgcagtc gaccaggcgt cggggcttcc ttgccatggg gtcgctcctt
      721 actgaccgat gaccaggtag accaggtagg tgcagaccac ggtggtggct gtcagctgga
      781 acacaacgcc cagccaaatc ttgaggaagg tgagggtctc ttgcatcgtc gtctcctttg
      841 gttggtaggg aagggtggag gcccgttgtc cgggcctctc tgggttcagt cgactttgac
      901 gtgcgggagt tcgccttgct tggctgcttc caatttcgct gctgcctctt ctggggtgag
      961 cagttcgtct cctacaaacc gggtgatctc ttcttcgtat tcggccaggg tgtacatt
//
LOCUS       DASRPQ010000724         1399 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1652023, whole genome shotgun sequence.
ACCESSION   DASRPQ010000724 DASRPQ010000000
VERSION     DASRPQ010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1399)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1399)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1399
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1652023"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..846)
                     /locus_tag="VFD73_08360"
     CDS             complement(<1..846)
                     /locus_tag="VFD73_08360"
                     /inference="COORDINATES: protein motif:HMM:NF007695.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HZI74030.1"
                     /translation="MASSKLSTAPATAAGTFTLGGDLTVNRMGFGAMRLTGPGIWGPP
                     KDRSEAIRVLQRAVELGVNFIDTADSYGPHVSEELIAEALHPYPGLVIATKGGLERPG
                     PDRWVENGRPDYLRRQLEASLRRLKVDRIDLWQLHRIDRKVPAEEQFGVMREFQEQGL
                     VRHLGLSEVTADEIDRARAVVPIVSVQNRYNVGDRKWEGELDYCERDGLAFIPWFPLS
                     AGTLAEGGPLHRIAERHGATVYQIALAWLLARSPAMLLIPGTSSVEHLEENIAAAEIR
                     LSKKDL"
     gene            complement(1017..>1399)
                     /locus_tag="VFD73_08365"
     CDS             complement(1017..>1399)
                     /locus_tag="VFD73_08365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74031.1"
                     /translation="NLGMALERSGYPAAAAKAYETAIALDSSYHKASVGLSRVTGGGQ
                     TPEETPVDLGRLSQQFQDEISGWKADSPVDSTVTQPVSDSTSGGGHEDQSSSVDSSPA
                     LGISDSAPASVEAVSDSVEDCEQD"
BASE COUNT          251 a          449 c          433 g          266 t
ORIGIN      
        1 cagatccttc ttgctgagcc tgatctccgc tgcggcgatg ttctcttcca aatgttccac
       61 cgacgatgtt cctggaatga gcagcatggc cggggagcga gccaatagcc aggcgagcgc
      121 tatttgataa accgtggctc cgtgccgttc ggcgatgcga tggagcggcc cgccttcagc
      181 gagcgttccc gccgacaggg ggaaccacgg aatgaacgcc agaccgtcac gctcgcagta
      241 gtccagctct ccttcccatt tgcggtcgcc gacgttgtag cggttctgca ccgaaacgat
      301 cggcaccaca gcgcgggcac gatcgatctc gtcggctgtc acttcggaaa ggccaaggtg
      361 acgcaccagt ccttgttcct ggaactcgcg catgaccccg aactgctcct ccgccggcac
      421 tttgcggtcg attcgatgga gctgccacaa gtcgatccgg tccaccttga gccggcgcag
      481 gctcgcctcc agctggcggc gcagataatc gggccggcca ttttcgaccc agcgatcggg
      541 gccgggacgc tcgagtccgc ccttggtggc gatcaccagc ccaggatatg ggtgcagtgc
      601 ctcggcaatc agctcttcgg atacgtgagg tccgtacgaa tcggcggtgt cgatgaagtt
      661 cacgcccagt tcgaccgccc gctgaagcac ccggatggcc tcgctccggt ctttcggcgg
      721 tccccagatg cctgggccgg tgagccgcat ggccccgaac cccatgcgat tgacagtgag
      781 atctccgccc agcgtaaagg tgcccgctgc cgtggcgggt gcggtgctga gtttgctgct
      841 tgccatgatg tactccacga aaaagaaaac cgccggcgcc agccagagac ggcgtaggca
      901 ggaagatttg ggcagagtag atcggtggcg tagcgtgaga tgtgatctca gtcacgagag
      961 tgctctcgag ctgaacaaag cggcccgtcc ggagacgggc cgcggcagat ccacaatcaa
     1021 tcctgctcac aatcttcgac gctgtcactg accgcctcga cggaggccgg ggccgagtcg
     1081 ctgataccca gtgccggaga cgagtcgacc gagctgctct gatcctcgtg accccctccg
     1141 ctcgtggaat cgctgaccgg ttgggtcacg gtcgagtcga ccggagagtc ggccttccaa
     1201 ccggagatct cgtcttggaa ctgctgagac agacggccca ggtccactgg agtttcctcc
     1261 ggggtctggc ctcctccggt cacccgcgag agcccgaccg aggccttgtg atagctgctg
     1321 tctagagcga ttgccgtctc ataggccttg gccgctgcag ctggatatcc cgagcgctcc
     1381 agcgccattc ccagattgt
//
LOCUS       DASRPQ010000725         3710 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2279458, whole genome shotgun sequence.
ACCESSION   DASRPQ010000725 DASRPQ010000000
VERSION     DASRPQ010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3710
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2279458"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(206..568)
                     /locus_tag="VFD73_08370"
     CDS             complement(206..568)
                     /locus_tag="VFD73_08370"
                     /inference="COORDINATES: protein motif:HMM:NF012753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HZI74032.1"
                     /translation="MKLIVAIIRPERLNEVLEALYRAEVRGLTLSRVLGHGGETERVE
                     TYRGTTVKVDLQEKVRLEIGVSEPFVNVTVNAILKSARTGDVGDGKIFVLDVAQVHRI
                     RTGEENEAAVTPAMVVPA"
     gene            complement(620..1912)
                     /locus_tag="VFD73_08375"
     CDS             complement(620..1912)
                     /locus_tag="VFD73_08375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018284512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HZI74033.1"
                     /translation="MDKINAADTAWMLVSTALVLLMTPALAFFYGGLVRNKNSLNTMM
                     MSFVALGVVGVTWAIAAYSLAFSDGGPLIGGLSHLGLNGVGTEAKGTIPHVLFMAYQG
                     TFAIITAALISGAVVERMRFGPYVVFIALWTLLVYAPVAHWVWGGGWLMSRGVLDFAG
                     GTVVHINAGVSALVAAIVLGARKDYGRQAVLPHSVPFTLLGAGLLWFGWFGFNGGSAL
                     AASELAALAFTNTFLAPMATLVVWTLLDYFRTGRATAVGAATGIVVGLVAVTPAAGFV
                     SPAAALLLGAIAALPSYFAIAWRSRTRIDDSLDVFAGHGIGGLTGALLTGVLAQKLWN
                     PAGNNGLLFGNPTQLGVQALGCLSSALYAAIMTFAILKALGLIISLRAVGRVEGVGMD
                     VTQHGEEAYASGEGSILVPPEATFAPEGLPAFSPQVAS"
     gene            complement(2041..3504)
                     /gene="glnA"
                     /locus_tag="VFD73_08380"
     CDS             complement(2041..3504)
                     /gene="glnA"
                     /locus_tag="VFD73_08380"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HZI74034.1"
                     /translation="MATTLRPTTSTRKSTSSEVQKLLELIKQKSIQVVDLKFCDLPGT
                     WQHFSIPAATLDEGMIREGLGFDGSSIRGFQAINESDMLLLPDASTAFVDPVLSVPTV
                     SLTCDIYDPLTLEPYSRDPRFIAFKAEEYLKTTGIATTSCWGPEAEFFIFNSVRFDQS
                     ANEGYYHIDSEEGIWNSGRNGIPNLGHRPRHKEGYFPVPPADRLQDVRSRIMLALIDA
                     GIPVEVQHHEVATAGQAEIDIRFGTLVQTADRLLAYKYVVKNVCHNLGLTATFMPKPL
                     FGDNGSGMHVHQSLWKGDVPLFFDENGYALLSETARHYIGGLIAHAPALLALCAPTTN
                     SYRRLVPGFEAPVNLMYSARNRSAICRIPMYSSSPKTKRIEFRAPDPTANPYLAFAAM
                     LMAGLDGIQRKLEPPAPIDEDLYELHDERKQLIKQVPGSLAESVAALEADHEFLLAGD
                     VFTPDVIETWITMKRAKDIAPVNLRPHPYEFFLYYDA"
BASE COUNT          721 a         1142 c         1178 g          669 t
ORIGIN      
        1 gtgctgtggg cgttcgcgat cccgacgatc ggcttgtcga aatcggcatc tccgaatccg
       61 acggcgcgca gcatggcccg gttcggcgcg cgctgcagcc cctgggtgat gacattgctg
      121 cggaaattgt ctggcattca gggaatgtac ggaaggaagc cccgaggcgg tacggcagtg
      181 aacttgctgc cgcaccgcct ggagattacg ccggcaccac catggcaggc gtgaccgctg
      241 cctcgttctc ctcgccggtt cgtatgcgat gaacctgggc gacgtcgagc acgaagatct
      301 tgccgtctcc gacatcgccg gtccgggcac tcttgaggat ggcgttgacg gtcacgttca
      361 cgaatggctc cgacacgccg atctcgagcc gaaccttctc ctgcagatcc accttgacgg
      421 tggtgccacg atacgtctcc acccgttcgg tctcaccgcc atgccccagg acgcgggaca
      481 gggtaagacc acgtacctcg gcacggtaga gcgcctccag cacttcattc agccgctcag
      541 gccggataat ggcaacaatc agcttcatcg tgagtccctc gtccaaactg ggtttgcctg
      601 tgccagcagc gaccgttgat cacgatgcca cctgcgggct gaacgccggc agcccttccg
      661 gcgcaaaggt ggcctcgggg gggaccagta tcgagccttc tccactggcg taggcttctt
      721 ccccgtgctg agtcacatcc atgccgaccc cctcgactct ccccacggcc cgcagggaga
      781 tgatcagacc gagcgctttc agaatcgcga acgtcatgat cgcggcgtag agggcggagc
      841 tgaggcagcc cagcgcctgc acgccgagtt gggtggggtt cccgaacagg agcccgttgt
      901 ttccggccgg attccagagc ttctgggcca gcactccggt caaaagagcg ccggtgagcc
      961 cgccgattcc atggcccgca aacacatcca gcgagtcgtc gatccgggtg cgcgaccgcc
     1021 aggcaatggc gaagtagctg gggagcgctg caatggctcc gagcagcagt gccgcagccg
     1081 ggctgacgaa gccagcggcc ggagtaaccg ccaccaggcc gaccacgatc ccggtagctg
     1141 caccgaccgc agtagctcga cccgtgcgga agtagtcgag cagggtccac accaccagcg
     1201 ttgccatcgg ggccagaaag gtgttggtga aggccaaagc ggcaagctcg ctggccgcga
     1261 gtgcgctccc gccgttgaac ccgaaccaac cgaaccatag cagtccggcg ccgagcaacg
     1321 tgaacggcac actgtgcggc agcaccgcct ggcggccgta gtccttgcgg gcgccgagca
     1381 cgatggcggc aaccagggca gagacacccg cattgatgtg caccacggtc ccaccggcaa
     1441 agtccagcac gcctctgctc atgagccagc cgccgcccca cacccagtgc gcaaccgggg
     1501 cgtagaccag gagagtccag agcgcaatga acacgacgta gggtccaaag cgcatacgct
     1561 caaccaccgc accagagatg agggcggcgg tgatgatggc aaaggttccc tgatatgcca
     1621 tgaacaggac gtgcgggatc gtccccttgg cttcggtgcc tacaccattg agacccagat
     1681 gcgacagacc accgatcagc ggtccgccgt cactgaaagc caggctgtaa gccgcgatgg
     1741 cccaggtcac cccgactacg ccgagcgcga caaagctcat catcatggtg ttgagtgaat
     1801 tcttatttcg gaccagcccc ccatagaaga aggcgagcgc cggggtcatg agcaggacca
     1861 gcgcggtcga gaccaacatc catgcggtat cggcggcgtt gattttatcc attgaacgaa
     1921 agctccagtg agaagtcgcg agtcgcgagc cgcgagtcgc gcaaacggcc tattactcaa
     1981 ctgctgatcg gcccaaacat tttgtcgtga ctcgtgactc gtgactcgtg actcgtgaca
     2041 tcacgcgtcg taatacagga agaactcgta cggatgggga cgcaggttca ccggcgcgat
     2101 atcctttgcg cgtttcatgg tgatccaggt ctcgatcacg tccggggtga acacgtcgcc
     2161 ggcgagcagg aactcgtgat cggcctcgag cgccgcgacc gactccgcca gacttcccgg
     2221 cacctgcttg atcagctgct tgcgctcgtc atggagctcg tagagatctt cgtcgatggg
     2281 agcgggaggt tccagcttcc gctgaattcc atccaatcca gccatgagca tcgcggcaaa
     2341 ggccagatac gggttggccg tgggatcggg cgcccggaac tcaatccgct tggtcttggg
     2401 gctgctcgag tacatcggaa tccggcagat ggccgagcgg ttccgcgccg agtacatgag
     2461 gttcaccggc gcctcgaagc ccggcaccag tcggcggtaa ctgttggtgg tcggggcgca
     2521 gagcgccaaa agcgctgggg cgtgcgcgat cagcccgccg atgtagtgcc gcgcagtctc
     2581 ggagagcagg gcatagccgt tctcatcgaa gaagagcggg acgtcgcctt tccacagcga
     2641 ctgatgaacg tgcatccccg acccattgtc tccgaacaat ggcttgggca tgaaggtggc
     2701 cgtgagcccc aggttatggc acacattctt caccacgtac ttgtaggcca gaagccggtc
     2761 agcggtctgc accagggtac caaagcggat gtcgatttcc gcctgtcccg ccgtggccac
     2821 ttcgtggtgc tggacttcta cgggaatacc ggcatcgatc agtgcgagca tgatcctgga
     2881 gcgcacgtcc tgcagccggt ctgctggtgg aacagggaag tagccttcct tgtgtcttgg
     2941 acggtggccg aggttaggga ttccattccg gcctgagttc cagatgcctt cttccgagtc
     3001 gatgtggtag tagccctcgt tggcgctctg atcgaaccgc accgagttga aaatgaaaaa
     3061 ctccgcctcc ggtccccagc aggacgtggt ggcgatgccg gtggtcttga ggtactcctc
     3121 ggccttgaag gcgatgaacc gaggatcgcg ggagtagggc tccagcgtca gcgggtcgta
     3181 gatatcgcag gtgagggaca ccgtgggcac tgagagcacc ggatccacga aagccgtcga
     3241 ggcatcgggc agcagcagca tgtcgctctc gttgatcgcc tggaatcctc gaatcgacga
     3301 gccatcgaag ccgagcccct cgcggatcat tccttcatcg agcgtggccg cgggaatcga
     3361 gaaatgctgc cacgttccgg gcaggtcgca gaacttgaga tcgaccacct ggatgctctt
     3421 ctgcttgatc agctccaaca gcttctgcac ttcactgctt gtcgacttgc gggtcgaggt
     3481 cgtgggtcgg agggtggtcg ccatggtact ctcggtctca gggttgcggt gttggggtca
     3541 ttaaagacga agcccccgcg ttggctgatc gaacgcaggg gcatcgggtg agcacgggga
     3601 caactcagtg ccaaggtcca ggcggttcga tcagaatcag cggccggttt cgctggcttg
     3661 ccggccactg gggctgggga ttggggccgg gtcggttgag ttgccgcatg
//
LOCUS       DASRPQ010000726         1016 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1972734, whole genome shotgun sequence.
ACCESSION   DASRPQ010000726 DASRPQ010000000
VERSION     DASRPQ010000726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1972734"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..223
                     /locus_tag="VFD73_08385"
     CDS             <1..223
                     /locus_tag="VFD73_08385"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HZI74035.1"
                     /translation="QPGKDLIKYGTSRLDDTLVKDHLIDEFRFWIRPVVVGAGQRLFE
                     HVDTSGLHLRLTHERRLENGSVILAYAPG"
     gene            complement(401..>1016)
                     /locus_tag="VFD73_08390"
     CDS             complement(401..>1016)
                     /locus_tag="VFD73_08390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74036.1"
                     /translation="LRTSTEREVAQLRATAKRERDEILSTSKRQADEMRSQAERILEE
                     SKAQRAQAEAEFEIQLATRREQAERQEAEWLTAAQSATQKLVSEAGQRASTAEQRAAK
                     ASAQADQARRDADQHARQQVGDAEKNAGQIVGQARTQAEQLLAGVNAEAERRRAATHR
                     EVEDLARQKDSIASDLMRVRQLLPGMNAVQAAQTKPAITGDSNR"
BASE COUNT          128 a          341 c          338 g          209 t
ORIGIN      
        1 ccagcccggc aaggacctca tcaaatacgg caccagccgc ctcgacgaca cgctcgtgaa
       61 agatcacctg atcgatgagt tccgcttctg gatcaggccc gtcgtagtcg gcgccgggca
      121 gcggctgttc gagcatgtgg acacctccgg gctccatctc aggctcaccc acgagaggag
      181 gctggagaac gggtcggtga tcctcgccta cgcgcccggc tgatgaagat gcgacacccg
      241 cgtggcgcag attcatcggc ggacctcgcg atctcccggg cgcagaccgc gggggtaccc
      301 gcctggccag gtgatgcctg gcgtttcgat ggccgtgttg agttagatcg tccggatatt
      361 agcgttgcta acgagattcc gggagccaga cggggcaggg ttaccggttc gagtcaccgg
      421 ttatggcagg tttcgtctgt gctgcctgca ccgcattcat gcctggcagc aactggcgca
      481 cccgcatgag gtcgctggcg atgctgtcct tttgcctggc gaggtcttcg acctcgcggt
      541 gggtggcagc gcggcggcgt tcggcttcag cgttgacccc ggcgagcaac tgctcagcct
      601 gggtcctggc ctggccgacg atctggccgg cgttcttttc tgcgtcgccg acctgctgtc
      661 tggcatgctg gtcggcatcc cggcgagcct ggtcggcctg ggcgctggcc ttcgctgccc
      721 gctgctccgc ggttgaggcg cgctgcccgg cttcggacac gagtttctgc gtcgcagact
      781 gggcggcagt gagccattcg gcctcctggc gctcggcctg ttccctgcga gtcgcgagct
      841 ggatctcgaa ctcggcttcc gcctgggccc gctgggcctt gctctcctcc aggatccgct
      901 ccgcctggct ccgcatctcg tcagcctggc gcttggaggt gctgaggatc tcgtcccgct
      961 cgcgcttggc cgtcgccctc agctgggcca cctcacgctc ggtgcttgtc cgtagc
//
LOCUS       DASRPQ010000727         1000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2906582, whole genome shotgun sequence.
ACCESSION   DASRPQ010000727 DASRPQ010000000
VERSION     DASRPQ010000727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2906582"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            77..>1000
                     /locus_tag="VFD73_08395"
     CDS             77..>1000
                     /locus_tag="VFD73_08395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74037.1"
                     /translation="MQFLAYIQNGHLLVTDVTNGVKGGTTQYTVAGQSDQVTDLVWSP
                     SGEFVAFVSAATGTPHVFYVFALGQSSPTDLGPGSAPAWSPDSTSIAFVGGTYPNENI
                     SVTTIDNPSPRQLTVEPNFAWGRPAFTPDGSALVVAGADRNNMGAQGNTSFVLDSLAL
                     DGSGTRLPLPGATPLDGMRLPYDLRFSPDGSKLAFSTSSHWSACASPGAYYVSNPDGS
                     NRQELISPSLKAAVDPGLEHFHVGLSYTWSTASNGIIALGNVIDCKLDSPTVGHVLAG
                     PQMSLIGLDGSEALVIPGFFYGISMDRSGAMI"
BASE COUNT          177 a          346 c          297 g          180 t
ORIGIN      
        1 taccacagcc gtcgagcctc tgcctgcccc ttctgaatca ccaacgccga ctgcagccca
       61 gccctccccg ggagccatgc agttcctcgc ttatatacag aacggtcatc tgctggtgac
      121 cgatgtgacg aacggcgtca agggcggcac aacccagtat acggtggcag ggcaaagcga
      181 ccaggtgacc gacctggtct ggtcgccgtc cggcgaattc gtggcattcg tctctgccgc
      241 tacgggcacg ccccacgtct tttatgtctt cgccctcggg cagagctcgc ccaccgatct
      301 gggaccgggc agcgcaccgg cctggtctcc cgacagcaca tccattgcct tcgtcggcgg
      361 cacctatccg aacgagaata tctcggtcac cacgatcgac aatccctccc cacgccagct
      421 cactgttgag cccaactttg cctggggacg cccggcgttc acgcccgatg gaagcgcgct
      481 ggtggtcgca ggcgccgacc ggaacaatat gggcgcgcag ggcaatacct cgttcgtgct
      541 ggactccctg gcgctggatg gcagcggcac acgcctgccc ctgcccggag cgaccccgct
      601 ggacgggatg cggctgccct acgacctgcg cttctcgccg gatggctcca aactggcgtt
      661 ctcgacctcg tcacactgga gcgcctgtgc ctcccccggc gcgtactatg tgagcaaccc
      721 cgacggaagc aaccgccagg agctgatcag cccgtcgttg aaggcggcgg tcgacccagg
      781 cctggagcat ttccacgttg gattgagcta tacgtggagc actgccagta acggcatcat
      841 cgccctgggg aacgtgatcg actgcaagct cgacagcccg accgtgggtc atgtgctcgc
      901 cggtccgcag atgtccctga tcggcctgga tggaagcgaa gcgctggtga tccccggctt
      961 tttctacggc atcagtatgg accgcagcgg ggcaatgatc
//
LOCUS       DASRPQ010000728         1306 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1025388, whole genome shotgun sequence.
ACCESSION   DASRPQ010000728 DASRPQ010000000
VERSION     DASRPQ010000728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1025388"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            792..>1306
                     /locus_tag="VFD73_08400"
     CDS             792..>1306
                     /locus_tag="VFD73_08400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74038.1"
                     /translation="MSRVRVHNFSISLDGFGTGEGQSLEAPFGHAGHRLNEWFFPTRT
                     FQGMQGQPGTAGSTGIDDAFACHWGPGIGAEIMGRNKFGPQRGPWADEDWKGWWGDDP
                     PFHTPVFVLTHHRRPTIEMQGGTTFHFIDASPAEALKAARAAAGGLDVRIGGGPTKVR
                     AFLAANLIDYL"
BASE COUNT          248 a          419 c          411 g          228 t
ORIGIN      
        1 atccgaatgg cgtgagactg aggctgaata gccactgcgc cacgcttgac gatcgcatcc
       61 cgccgcaaca catcgagggg cagactccct cccggcttca tttgatcact cagcagatct
      121 ggggcagccg gtacccaatg ctgttggatg ccctcagtat acctggggca gtgtcaacgt
      181 gcggtcaaca ggcggtccac atcccatcaa cacagaatca gccgcgggac gagtgtgtag
      241 cagatcactg aactgatgag ttgcgttagg ccgtccgcga acgagacgtt cgcgttcgga
      301 aatatgtgcg tcgagaccag gagaatccta gaaaaactcg cgtggccccc ttggatctct
      361 gtgagtgcaa agatgaggat cacggaccga ccctcggccg actgcggcat cggcgaccag
      421 caggtggcgt gctgctcgcc catcgcccat cgccctccct gcccggcgcc gtcgcccgtg
      481 ccagctccga gatacgcgtt tcccgcagcc agtgacagga tcgaagcccg cacgccacgg
      541 tctttcaagc cgtggtaagt gcgattccga tagtaactta cgcaacaaga gtgtactcag
      601 tgagacggtc gcttcaggat ctctcctcgg acagatctgc cgtctcgtcc cgggcggttg
      661 gggccgggca ggcctctcgc gtacagcaga tccggtgagc cagggttcct tttgtccttc
      721 aatggctccc cccgccggtc gcgagcatcc gcggggcgtc agcccctgcg cagtgtcaag
      781 aggagaggga aatgtcacgc gttcgggtcc acaacttctc catttcgctc gacggattcg
      841 ggacgggcga gggtcaaagc ctcgaagcgc cctttgggca tgccggccac cggctcaacg
      901 agtggttctt ccccacccgc accttccagg ggatgcaagg ccagccaggc acggcaggga
      961 gcaccggcat cgacgatgcg ttcgcctgcc actggggccc cggcatcggc gccgagatca
     1021 tgggacggaa caagttcggc ccccagcgtg gcccctgggc tgacgaggac tggaaagggt
     1081 ggtgggggga cgacccgccg ttccacacgc cggtgttcgt cctcacccat catcgcaggc
     1141 cgaccatcga gatgcagggc ggcaccacgt tccacttcat cgacgcgagc ccggctgagg
     1201 ccctgaaagc ggcccgggca gcggccgggg gcttggatgt gcgcattggc ggagggccaa
     1261 caaaggtgcg tgcgttcctg gcagcgaatc tgattgacta cctgca
//
LOCUS       DASRPQ010000729         1449 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4158743, whole genome shotgun sequence.
ACCESSION   DASRPQ010000729 DASRPQ010000000
VERSION     DASRPQ010000729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1449
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4158743"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1193
                     /locus_tag="VFD73_08405"
     CDS             <1..1193
                     /locus_tag="VFD73_08405"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZI74039.1"
                     /translation="DGNTSDSTETPVAIEECLALGLEGVRGIVADSKAYCKRTLGLCL
                     EQRVGLITLVPRTCAVRQELEAWGQQHSGLPLLHEKPGRTRQEPPRRWHGQSVVRRVP
                     VEYADGRLDVAEIRFLVVHSSQLAHQAAVAYAAAQAKEAERVTEHARHVEARWFACAA
                     DAEAAIAEYEGCGQGRRGRKPRPWRHHVLHYQVEAVNVPQKRTRRGRPPKAEAPQVES
                     RYRLRVHPEALVSSEEAHGWTVLATTVGPEKCTDAELLQAYQEQHITVEPGFRWIKNP
                     AAISPVWLEKPERIAALAMLTVVGLLVYAVIQRQVRLYLRDHNQSIPGNKGPTATPTA
                     AVVFALFAPVMLVQFVMENAISLQVHGLQDQHLIVCEALGIDPAWYQGVTTGQNSLPR
                     TTPP"
BASE COUNT          264 a          437 c          486 g          262 t
ORIGIN      
        1 gcgatggcaa taccagtgac agcacagaaa cgcctgtggc gattgaggag tgtctggcgt
       61 tgggcttgga gggggtacgc gggattgtgg cggacagtaa ggcctactgt aaacgcacgc
      121 tgggattgtg tctagagcag cgcgtggggc tgatcacgtt ggtgccgcgc acgtgtgcgg
      181 tgcgccagga gttagaggcc tggggccagc agcacagtgg cttgccctta ttgcacgaaa
      241 aacctgggcg gacccggcag gagcccccgc gacgctggca tgggcaaagt gtcgtccgtc
      301 gcgtaccagt ggagtacgct gacgggcgtc tcgacgtggc cgagatccgc tttctagtcg
      361 tgcactccag ccagttggcc caccaggcgg ctgtggcgta tgctgccgcc caagcgaagg
      421 aagccgagcg tgtcacagag cacgctcggc acgtggaagc ccgctggttt gcctgtgctg
      481 ccgatgcgga ggcggccatt gccgagtacg aagggtgtgg ccaggggcgg cgggggcgca
      541 agccacggcc ttggcgtcat catgtcctgc actatcaagt cgaagcggtc aatgtccctc
      601 aaaagcggac gcggcgaggc cgtccgccaa aggcggaggc acctcaggtc gagagccgct
      661 atcgcctcag ggtgcacccc gaggccctgg tgtcctcgga ggaggcgcac gggtggactg
      721 ttctcgcgac cacagtgggg ccagagaagt gtacggatgc cgagctgctt caggcatatc
      781 aggagcaaca tatcacggtg gaaccgggct ttcgctggat caagaatccc gccgccatca
      841 gtccggtatg gctggagaaa cccgaacgga ttgcggcctt ggccatgctc acggtcgtgg
      901 ggttgctcgt gtatgccgtg atccagcggc aggtccgcct gtatctccgc gaccataatc
      961 agtccatccc cgggaataaa gggccaacgg ccacgcccac agcggccgtg gtctttgctc
     1021 tctttgcccc ggttatgctg gtccaatttg ttatggagaa tgcgataagc ctccaagtcc
     1081 atggcctcca agaccagcat ctgatcgtct gtgaggccct aggcattgat ccggcctggt
     1141 atcaaggagt gacaacaggg caaaattcat tgccgcgtac cacaccccct tgaacgtggg
     1201 ctggagaagc ctagcccggc ctatcagggc ccgctctacc gcctgacggt ctgggtgccg
     1261 atcgcgctcc tggcgcctgt ggccctcgga atcgcccgtg cggcccttga cgacctgctc
     1321 accttagccc ggaccaagac cccgacgtat atgggtgcgg cgctcggcca gcggcaggtc
     1381 gtccagcgcc aggtggccga agctgaagcc acgctcggtg cgggccgggc ctacctgtat
     1441 gccacgttc
//
LOCUS       DASRPQ010000730         1826 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3532389, whole genome shotgun sequence.
ACCESSION   DASRPQ010000730 DASRPQ010000000
VERSION     DASRPQ010000730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1826
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3532389"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..202)
                     /locus_tag="VFD73_08410"
     CDS             complement(<1..202)
                     /locus_tag="VFD73_08410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74040.1"
                     /translation="MSHRTTVVWSKGWAGAPDRNPEHHRAVARGGAGDRVCGMDRRGP
                     GMAVDEDRAGVFSWQAITQLSDH"
     gene            complement(199..792)
                     /locus_tag="VFD73_08415"
     CDS             complement(199..792)
                     /locus_tag="VFD73_08415"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HZI74041.1"
                     /translation="MHIQELLIRYGLIAVLIGSAFEGDFSLILAGVVSHLGIFHFTEA
                     VAVGAIGSLAGDSIWYSFGRFRGPKFREGKLYRRVGPTIDRLARRLGPWELLAARFVY
                     GTKAASMVFWGLHGLSLPRFLIIDAIGCVIGSFVFTGVGYLVSGSATVLLGKVRRIQR
                     WLLGAVIVGAVVVYLINRTAKHELHLDENEEGTTPSV"
     gene            complement(795..>1826)
                     /locus_tag="VFD73_08420"
     CDS             complement(795..>1826)
                     /locus_tag="VFD73_08420"
                     /inference="COORDINATES: protein motif:HMM:NF013109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HZI74042.1"
                     /translation="GTRFGEIRVGIPRLTLPTVSLAELRDLVRPAFAIAALGAVESLL
                     SAVVADGMIGGRHRSNMELVAQGVANVVTPLFGGIPATGAIARTATNVKSGGRTPVAG
                     IVHALTLLLITLFFGRLAALIPLATLAAIVLWVAYRMADWPVFRSELSAPKSDALVML
                     STFLLTVLVDLTTGIGVGMVLASFLFMKRMAEVTNVRAVSDEFQDPAPSTDVSGAIYR
                     RRVPKGVEVYEINGPFFFGAAEKFKDTLSEVSKKPKVLIVRMRNVPAIDSTALHALRD
                     LVRRTRRDGTLVYLSDVHAQPLLALRRSELLDEIGESCLFANVDEALAAARQQLGLAS
                     ELDIPQMRN"
BASE COUNT          385 a          619 c          530 g          292 t
ORIGIN      
        1 catgatcaga cagctgggta attgcctgcc atgagaatac cccagcccga tcctcatcca
       61 cagccattcc cggaccccgg cgatccatcc cgcagacccg gtcccccgcc ccgccccgag
      121 ccacagcccg atggtgctcc ggatttcgat ccggagcccc ggcccaaccc ttggaccaaa
      181 ccaccgtcgt tcggtgactc acaccgacgg cgtggtgccc tcttcatttt catcgaggtg
      241 tagctcgtgc ttggcggtgc ggttgatcag gtagacgacc accgcgccca cgatcactgc
      301 ccccagcagc caccgctgga ttcggcggac ttttccgaga agcaccgtcg cactgccgct
      361 cacgaggtag cctaccccgg taaagacgaa cgagccgatc acacagccga tcgcgtcaat
      421 aatcagaaag cgcggcaggc tgagcccgtg cagtccccaa aacaccatgc tcgccgcctt
      481 ggtcccataa acgaagcgag ccgccaggag ctcccacggg cccagccgac gggccaagcg
      541 atcgatcgtc ggacccactc gccggtagag ctttccctcg cggaacttgg gcccccggaa
      601 gcgaccgaag ctataccaga tggaatcgcc ggccaaactg ccgatggccc ccacggcgac
      661 tgcttcggtg aaatggaaaa ttcccaggtg cgatacgaca ccggccagga tcagactgaa
      721 gtctccttcg aaggccgaac caatcagcac cgctatgagg ccatagcgga tcagcagctc
      781 ctggatgtgc acgtctagtt ccgcatctgg gggatatcga gctcggaagc caaaccgagc
      841 tgttgccgcg cggccgcgag cgcctcgtcc acattggcga acaggcaact ctcaccgatc
      901 tcatcgagta gctctgaacg ccgcagcgcc agcaggggtt gagcatgcac gtcggagagg
      961 tacaccaggg tgccgtcccg acgggtgcgt cgtaccagat cacgcagcgc atgcaaggcg
     1021 gtcgaatcaa tggcaggtac gttcctcatc cgcacgatca gcactttggg cttcttcgac
     1081 acctcggaga gtgtgtcctt gaacttctcg gcggcgccaa agaagaaggg gccgttaatc
     1141 tcgtacactt ctacgccttt cggcacccgt cgccggtaga tggcgcccga gacatcggtg
     1201 cttggagcag ggtcctgaaa ctcgtccgac acggctcgga cattggtgac ttccgccatg
     1261 cgcttcatga acagaaacga ggccaaaacc atccctactc cgatccccgt ggtgaggtcg
     1321 accagaacgg tgagcaggaa ggtcgagagc atcaccagcg cgtcactttt gggggcgctc
     1381 agctcgctcc tgaataccgg ccagtcagcc atccggtacg ccacccacaa gacgatcgcc
     1441 gcgagagtcg ccagcggaat cagcgccgcc agacggccga agaacaacgt aatgaggagc
     1501 agagtcaacg cgtggacgat tccggcgacc ggcgttcggc cgccactctt cacattcgtc
     1561 gccgttcggg cgatggcgcc ggtggcaggg attccgccaa acaggggagt caccacgttc
     1621 gcgacacctt gggccaccag ctccatattc gagcggtggc ggcctccgat catgccgtcc
     1681 gccaccacgg cggagagcag cgactcgacg gcaccaagtg ccgcgatggc aaacgccggt
     1741 cgcaccaggt cccggagctc tgccagcgat acggtgggaa gagtcagccg gggaattccg
     1801 acccgaatct cgccgaagcg ggttcc
//
LOCUS       DASRPQ010000731         1172 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2279927, whole genome shotgun sequence.
ACCESSION   DASRPQ010000731 DASRPQ010000000
VERSION     DASRPQ010000731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1172
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2279927"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..567
                     /locus_tag="VFD73_08425"
     CDS             <1..567
                     /locus_tag="VFD73_08425"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF017200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S16 family serine protease"
                     /protein_id="HZI74043.1"
                     /translation="ATGLAWTPVGGDILFIEGSRTPGSGKLILTGQLGDVMKESAQAA
                     LTLVKSRAESLGIDVSGLDKSDIHVHVPAGAIPKDGPSAGVAMFMALASLLSNRAVRS
                     DTAMTGEISLRGLVLPVGGIKEKVLAAMRAGITTVMLPKRNEKDLQDVPEEAKRNLQF
                     VLLETVDQAVAAALGTTAIASREPALAD"
BASE COUNT          233 a          347 c          386 g          206 t
ORIGIN      
        1 gcaaccgggc tcgcatggac gccggtgggc ggcgacatcc tgttcatcga aggcagccgc
       61 acgccaggaa gcggtaagtt gatcctgacc ggtcagctcg gggatgtgat gaaggagagc
      121 gcccaggctg cactgaccct ggtgaagtca cgagctgaga gccttggcat cgacgtcagc
      181 gggctcgaca agtcggatat tcacgtccat gtgccggccg gggcaattcc aaaggacggg
      241 cccagcgccg gtgtggcgat gttcatggca ctggcatcgt tgttgtccaa tcgtgcggtg
      301 cgcagcgata cggcgatgac cggtgagatt agcttgcgcg ggctggttct gccggtgggc
      361 ggaataaaag agaaggtgct ggcggctatg cgtgccggca tcacgaccgt catgctgccg
      421 aagcgcaacg agaaggatct gcaggatgtg cccgaggagg caaagcgcaa tctgcaattc
      481 gtgctgctgg aaaccgtgga ccaggcggta gccgcggcgt tgggtacgac cgctatcgcc
      541 tcccgcgagc ctgcgctggc ggactgaagc cactaactac tccacctggc ttagagtcgc
      601 ggagaagggc ggaggatgcg agaaaagaaa gacagcgacg gaaagaaacc gtaaggagta
      661 acgtaatcgc cttatcggac cgaacgatcc tcgcttcggt cctcctccgg cgcactgtgc
      721 gctcctgcgc gttgggtctc cgaaaagccc cgggcaaccg cccggggctt ttattggggc
      781 aaccctaact ggctacacgc caaggccgtg cgctgtggtt cggcactcgc tgaacgcgaa
      841 gcaggcctgc tccatcaaca cggcgtcgac cggtacggcg gacccggcat cccgcgcaac
      901 ggtgcttgga acttggaccg gctcagtctg attcacgctg tgcggagctg ctccgcagcc
      961 ggcacacgct agaaccagca aggctactgc cgctttcatg ttcatggtcg agctcccctt
     1021 ttgagttgca aactacgaga gcaacgatag cggcccgggg cccggtaatc gcgtaccgat
     1081 tgcgcggctc gcctgtgact ttttcacagg gtccagagtg tggctcccga cgccgcctca
     1141 acctgtacgg ctggaggccg cgtccagaaa gc
//
LOCUS       DASRPQ010000732         1143 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1025490, whole genome shotgun sequence.
ACCESSION   DASRPQ010000732 DASRPQ010000000
VERSION     DASRPQ010000732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1025490"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(278..>1143)
                     /locus_tag="VFD73_08430"
     CDS             complement(278..>1143)
                     /locus_tag="VFD73_08430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74044.1"
                     /translation="STTSSQSGPVRSLAERWNGKSWTILPTPNPAKAVQSFLGPVSCT
                     ALSACTAIGEQHSAAGIVHTLAERWNGTTWRIQPTPNPPGVQFASLAGVSCTGPSACL
                     ATGGSDQGTLAERWNGNAWRIQPTPNPPGGGNILLASVACPASSACTAFGFDETSSGQ
                     HLTLAERWNGHTWRIQPTPAIVAADIGLPAVACPTLSACVAVAGYTNNGPNLTLAELW
                     NRPNSGSPPATSHPAVRHGLALTCTRSPLSIAASGWRPNPAPASHRSLAQSLNRTNPR
                     RPGTPGWCLPI"
BASE COUNT          154 a          330 c          445 g          214 t
ORIGIN      
        1 agctggctat ctaggcaaaa gcctaagtgt cacgcagcgt catcgcctgg agggcgcatc
       61 cctgcccagc aacccgcaca tcgattacgc gcttcgggtt gatggccggt tcgcggtggt
      121 cgagccgcgc agaacgcgct gttctggcgc cacttgtctt gtgccgtcgt ttagggtcgg
      181 ttcggatcgc ctcaggggcc ttggcaaggc gcggttagcg gctgtggctg gcctggatgc
      241 ttggttttgt gatttgcact cgagggccgg atgggcttca tattggcagg caccagcccg
      301 gcgtgcccgg tcgccttgga ttggtccgat tgaggctctg ggccagggac cggtgcgatg
      361 ccggtgcggg gttgggccgc caaccggatg ccgcgatgct gaggggggag cgtgtgcagg
      421 tcagagccaa cccgtgccgt actgctgggt ggctggtggc tggcggggaa ccgctgttgg
      481 ggcggttcca tagctcggcc agggtcaggt tcgggccgtt gttggtgtag cccgcgacgg
      541 cgacgcaggc tgagagcgtc gggcaggcca cggctggcaa gccaatgtcg gctgccacga
      601 tggctggggt tggctggatg cgccaggtgt ggccgttcca tctttccgca agcgtgaggt
      661 gctggccgga gctggtctca tcgaagccaa atgcggtgca cgccgaagat gccgggcagg
      721 ccacgctggc aaggaggatg ttcccgcctc ctggcgggtt gggcgtgggc tggatgcgcc
      781 aggcgttgcc gttccaccgt tccgccaggg tcccctggtc tgaccctccg gtggcgaggc
      841 aggctgaagg cccggtgcag gacacgcccg ctagggatgc gaactggacc cctggcgggt
      901 tgggggtggg ctggatgcgc caggtggtgc cgttccaccg ttcggccagg gtgtgcacga
      961 tcccggcggc ggagtgctgc tccccgatgg ccgtgcaggc cgagagcgcc gtgcaggaca
     1021 ccgggcccag gaagctctgg acagccttcg cgggattggg ggtgggcagg atcgtccagc
     1081 tcttcccgtt ccaccgctcc gccaaggacc ggacagggcc cgattgggac gaggtggtgg
     1141 agt
//
LOCUS       DASRPQ010000733         2661 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2605550, whole genome shotgun sequence.
ACCESSION   DASRPQ010000733 DASRPQ010000000
VERSION     DASRPQ010000733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2661
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2605550"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..342)
                     /locus_tag="VFD73_08435"
     CDS             complement(<1..342)
                     /locus_tag="VFD73_08435"
                     /inference="COORDINATES: protein motif:HMM:NF024586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HZI74045.1"
                     /translation="MHDIHRSKPELIHELTGLRKQVSDLKESMLARRRVEDALRESET
                     MLRLLADGAPVGLALFQQDGTLVAANRPLATMLGYQSPADLLSVAAVLGVFASPEEQS
                     RALLTPPENPAA"
     gene            complement(380..1417)
                     /locus_tag="VFD73_08440"
     CDS             complement(380..1417)
                     /locus_tag="VFD73_08440"
                     /inference="COORDINATES: protein motif:HMM:NF041359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntG family PLP-dependent aldolase"
                     /protein_id="HZI74046.1"
                     /translation="MVSVDLFSDTVTRPTEPMRRFMCAAEVGDEQQREDPTVNQLQEM
                     VADLLGKEAALFLPSGTVCNQVAFAVHCRTGVEILLQELAHPLLYEVGGPAALTGAVL
                     RPLSGPRGQFTGQQVRAAIRPPAYYMPRTRVVSVEQTSNVSGGLCWPLDRILEVCEAA
                     HSGGLVTHMDGARLFNAVVATGTSARQFAAPFDSVWIDLSKGLGAPVGAVLAGSGEFI
                     EEAWRYKQRFGGAMRQAGIIAAAGVYALRHHVDRLAEDHQRARLLAEGLAQLPGISLD
                     PKQVETNIVIFDVAGTGLSGDRFADRTLTGYGVRFSVLGPTTVRAVTHLDIPADGISR
                     AIEAARAALRV"
     gene            complement(1411..>2661)
                     /locus_tag="VFD73_08445"
     CDS             complement(1411..>2661)
                     /locus_tag="VFD73_08445"
                     /inference="COORDINATES: protein motif:HMM:NF028259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74047.1"
                     /translation="GGPLYPLVALAAVVPYLVLPAVVGTAITMVLVNVFPARRTRELL
                     GLMATGAVVIVVLALRLLRPEQLAQPEGFKNLVDYLAVLRTPTSPLLPSEWTADMVMN
                     WLLRIADPLPIAKLWGAAAVTVLLGALLHQRLYHVGFSKAQEGAERKLRRTLRGPVQG
                     LLWSVSPVKREFILKDLRIFFRDNTQWSQLILLVVLLLVYLFNIKSLPLHSGERVPFR
                     LITMISFLNLGLAGFVLAAVAARFIFPGISLEGRQMWLLRSSPVDPRAMLWSKYWIGT
                     APLLALALVITVFTNWLLHASEFMMAVAIGTIVLYTLAASSLALSLGALYPQFGSENA
                     AQIPTSFGGFVYMMSSLSLLAAIIIVEAAPVSSYLRLDRFGGNLRSIFPELVGAAVLV
                     LAICFAATIIPLRLAHRRIEMTEW"
BASE COUNT          552 a          828 c          859 g          422 t
ORIGIN      
        1 agcagcaggg ttttccggtg gggtgaggag ggcgcgtgac tgttcttctg ggctggcgaa
       61 cacgcctagc acggcggcaa ccgaaagcag gtcggcagga gattggtaac ccagcatggt
      121 cgccaacggg cggttggcag ccacgagagt gccatcttgc tggaacagcg cgaggcccac
      181 gggagctccg tcggccaaga gacgcaacat ggtctccgat tcgcgcaagg catcttcgac
      241 ccgacgccga gccagcatgg actctttgag atcgctcacc tgcttgcgca aaccggtgag
      301 ctcgtgaatc agctcgggtt tgctccgatg aatatcgtgc atggcacgat gtaggacggt
      361 ggcggtaggc gatcttgcac tagactcgaa gcgctgctct cgcggcctcg atggcacggg
      421 aaataccatc ggcaggaatg tcgagatgag tcacggctct gacggtggtt ggacccagaa
      481 cgctgaaccg cacaccatat ccggtgaggg tgcggtcggc gaagcggtct ccgctcaggc
      541 cggttccggc cacatcgaag atcacgatgt tggtctcgac ttgctttgga tcgagggaaa
      601 tccccggcag ctgggccagc ccctccgcca ggaggcgggc tcgctggtga tcttcggcca
      661 atcggtcgac atgatgccga agggcgtaga cgccggcagc ggcgatgatc ccggcctgcc
      721 gcatggcccc gccaaaccgc tgtttataac gccatgcctc ctcgatgaac tcgccggagc
      781 ccgccaacac ggcgccaacc ggggcgccta gccccttgct aagatcgatc cagaccgaat
      841 cgaaaggcgc ggcgaactga cgagccgagg tgccggtggc caccaccgcg ttgaagagcc
      901 gggcgccatc catgtgggtg accagcccgc cactatgcgc cgcctcgcac acctccagaa
      961 tccgatccag cggccagcaa agtccgcctg agacgttgct ggtctgctct accgaaacaa
     1021 cccgggtgcg tggcatgtaa tacgccggtg ggcgaatggc ggcgcgcacc tgctggccag
     1081 tgaactgtcc tcggggtccc gagaggggtc ggaggacggc accggtgagg gccgctgggc
     1141 cgccgacttc atagagcagc gggtgggcta gctcctgtaa cagtatttcg actccagtcc
     1201 gacagtgcac cgcaaaggcg acctggttgc acacagtgcc ggaggggaga aacagcgccg
     1261 cctccttgcc caacagatct gcaaccatct cctgaagctg gttgaccgtg gggtcttctc
     1321 gctgctgctc gtctccgacc tcggccgcac acatgaagcg gcgcatcggt tcggtggggc
     1381 gggtgaccgt gtcgctgaaa aggtctacgc ttaccactcc gtcatctcaa tacgacggtg
     1441 cgccagccgc aaaggaatga tggtggcggc aaagcagatc gcgaggacca gcactgccgc
     1501 tcctaccagc tccgggaaga tgctcctcag gtttcccccg aagcgatcca gccggagata
     1561 cgagctcacc ggtgcggctt cgacgatgat gatcgccgcg agcaggctca ggctgctcat
     1621 catgtagacg aagccaccga agctggtggg aatctgggcg gcgttctcgc tgccgaactg
     1681 agggtagagc gcgccgagcg agagcgccag cgagctcgcc gccagggtat agagcacgat
     1741 ggtgccaatg gcaaccgcca tcatgaactc gctggcgtgg agcagccaat tggtaaagac
     1801 ggtgatgacc agcgcaagcg cgagcagagg ggcagtgccg atccagtatt tgctccagag
     1861 catggccctg ggatcgaccg ggctggagcg caggagccac atctggcgcc cctccagaga
     1921 aatgccggga aagatgaatc tcgccgcaac ggcagccagg acgaatccgg ccaggcccag
     1981 gttcaaaaac gagatcatcg tgatgagccg gaacggcacc cgctcgcccg agtgcagcgg
     2041 cagagacttg atgttgaaca gatacaccag cagcagcacc accagcagga tcaactgact
     2101 ccactgcgta ttatcgcgaa agaagatcct gaggtccttg aggataaact cccgcttgac
     2161 cggcgatacc gaccagagca gcccctgcac cggaccgcgc aatgtccggc gcagctttcg
     2221 ttcggctccc tcttgggcct tggagaagcc tacgtggtac aggcgctggt gaagcagcgc
     2281 tccgagcaat acggtaacgg cggcggctcc ccagagcttc gctatcggca gcgggtcggc
     2341 aatccggagc agccaattca tgaccatatc cgcggtccac tcgctgggaa gcagagggct
     2401 cgtgggggtg cggagaaccg ccaggtagtc gaccaggttc ttgaacccct cgggctgggc
     2461 gagctgctcc ggacgcagca ggcgcaaggc cagcaccacg atcaccaccg cgcccgtcgc
     2521 catcagtccc agaagctctc tcgtgcgccg ggctgggaag acattgacca gcaccatcgt
     2581 gatcgcggtg cccacaacag ccggaagaac caggtaggga acgaccgctg ccagagcgac
     2641 cagcgggtac agagggcctc c
//
LOCUS       DASRPQ010000734         2118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1339648, whole genome shotgun sequence.
ACCESSION   DASRPQ010000734 DASRPQ010000000
VERSION     DASRPQ010000734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1339648"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1726)
                     /locus_tag="VFD73_08450"
     CDS             complement(<1..1726)
                     /locus_tag="VFD73_08450"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZI74048.1"
                     /translation="MQEAAVVLGVLRERGRKGLPLTQLYRQMCNRDLYLTAYGNIYSN
                     KGAMTPGPDGETADGMSRGKIGRIIDAMRHERYRFQPVRRVYIPKKNGKLRPLGMPPW
                     SDKLVGEVIRLLLEAYYEPQFSGRSHGFRRGRGCHSALSEVSETWTGTAWFIESDISD
                     CFGSFDHEVMLSTLAEKIYDNRFLRLIKQMLQAGYLEEWEYHNTLSGVPQGGVVSPVL
                     SNIYLHRMDEFVETVLMPEYTRGKRRASNPAYFRIRSAARRARARGDHAKARELRAQQ
                     RSLPSSDPQDPGYRRLRYVRYADDALLGFAGPKAEAEEIKSRLAAFLRDNLRLELNED
                     KTLLTHARTGAASFLGYEVTVQHSRTRPHVNGSIRLRVPLAVIKAKCAPYFQHGKPER
                     RTRLLNFDDSLIISTYGAEYRGIVQYYLLAGDVWRFNRLEWAAKTSMLKTLAAKHRSR
                     VSRMARKYQAKVDTPHGKRNCFEAVTERPGRKPLIARFGGIPLKRQKKAVIDDRPAVP
                     ATTRKELVTRLRAGRCEWCQRPAAVEVHQVRKLADLTRPGRPQPAWAKRMAKMRRKTL
                     IVCIPCHQA"
     gene            1932..>2118
                     /locus_tag="VFD73_08455"
     CDS             1932..>2118
                     /locus_tag="VFD73_08455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74049.1"
                     /translation="MNALTGRRSLAPEDYRRSTTTLRQGLAPVPGVFPAGTSLCLLGA
                     GLQAVQPLPYRAGLPARR"
BASE COUNT          298 a          688 c          694 g          438 t
ORIGIN      
        1 tggcctggtg gcaggggatg cagacgatga gtgtcttcct gcgcatcttg gccatgcgtt
       61 tcgcccacgc gggctgcggt cgtcccggcc gggtgaggtc ggcgagcttg cggacctgat
      121 ggacttccac ggccgcgggc cgctgacacc actcgcaccg gcccgcgcgg agccgggtga
      181 ccagttcctt acgggtggtt gccgggactg ccgggcggtc gtcgatgacc gccttcttct
      241 gccgtttcag cgggatgccg ccgaacctgg cgatcagtgg tttcctgccc ggccgctcgg
      301 tgacggcctc gaagcagttc cgtttcccgt gcggggtgtc caccttggcc tggtacttgc
      361 gggccatgcg ggacacccgg gaccggtgct tggcggccag cgtcttgagc atggaggtct
      421 tggcggccca ttcgagccgg ttgaacctcc acacgtcgcc agcgagcagg tagtactgaa
      481 cgatgccccg gtactcggct ccgtaggtgc tgatgatgag tgagtcatcg aagttcagca
      541 gcctggtgcg gcgctcgggt ttcccgtgct ggaagtacgg ggcgcatttc gccttgatca
      601 ccgccagggg cacgcgcagc cggatggacc cgttgacgtg cgggcgggtc ctgctgtgct
      661 ggacggtgac ctcgtagccg aggaaggacg cagcgccggt cctggcgtgc gtgagcaggg
      721 tcttgtcctc gttgagttcc agcctgagat tgtcacgcag gaacgccgcg aggcggctct
      781 tgatttcctc tgcttcggct ttcggtccgg cgaacccgag gagggcgtcg tcggcatacc
      841 ggacataccg cagccgccgg tagcccggat cctggggatc cgaactgggc aggctgcgct
      901 gctgcgcacg cagttcccgc gccttggcat ggtcgccgcg tgcacgtgcg cgtcgggctg
      961 ctgaccgtat cctgaagtag gcagggttgg atgctctgcg ctttccccgg gtatattccg
     1021 gcatgagaac tgtctcgacg aattcgtcca tccggtgcag gtaaatattg gagagtacgg
     1081 gcgacactac tccgccttgc gggacgccgc tcagcgtgtt gtggtattcc cattcctcca
     1141 ggtacccggc ttggagcatc tgtttgatga gccgcaggaa ccggttatcg tagattttct
     1201 ccgccagggt cgacagcatg acctcatggt cgaagctccc gaagcagtca gagatgtcgc
     1261 tctcgataaa ccaggctgtc ccggtccacg tttctgacac ctcgctcagc gcggagtgac
     1321 agccgcggcc gcgacggaaa ccgtgtgagc ggccggagaa ctgcggctcg taatacgcct
     1381 ccagcaggag ccggattacc tcgccgacca gtttatccga ccagggcggc attccgaggg
     1441 gcctgagctt cccgttcttc ttgggaatgt aaacccgccg gacgggctgg aaccggtagc
     1501 gctcgtggcg catcgcatcg atgatgcggc cgatcttgcc ccgcgacatg ccgtctgcgg
     1561 tttccccgtc tggcccgggt gtcatcgccc ccttgttgga gtagatgttc ccgtaggcgg
     1621 tcaggtacag atccctgttg cacatctgcc ggtaaagctg cgtgagcggc aggcccttcc
     1681 tgccgcgctc gcggagaacg ccaagtacca ctgcggcttc ctgcatttcg cttgcctcat
     1741 ggctccttat cgtccggtcg cctgtgcccc ttcaccctgt ggtccggctc tcccggtctc
     1801 cagattgggc ggacgtaacc ccgccggcta ctacgggcac tccgtcaccc tcgggctcgc
     1861 gcccggtcgg gtgatcccac gttcacactg ccgtacgtat cgagcgcgac ttaggcatcc
     1921 cgttcgcccc cttgaacgcc cttactgggc gtcgctccct ggccccggag gattaccgca
     1981 ggtctactac caccctgcgg caggggctgg cgccggttcc gggcgtcttt ccggcgggca
     2041 cgtccttatg cctgctgggg gctgggcttc aagcagtgca gcctttgcct tatcgcgcgg
     2101 gcctcccggc acgccgcc
//
LOCUS       DASRPQ010000735         1494 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1025691, whole genome shotgun sequence.
ACCESSION   DASRPQ010000735 DASRPQ010000000
VERSION     DASRPQ010000735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1494
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1025691"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            222..294
                     /locus_tag="VFD73_08460"
     tRNA            222..294
                     /locus_tag="VFD73_08460"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:255..257,aa:Leu,seq:caa)
     gene            776..1099
                     /locus_tag="VFD73_08465"
     CDS             776..1099
                     /locus_tag="VFD73_08465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74050.1"
                     /translation="MKHQRVIELEPWQERIVAEYPGDFARGLFHSDGYRGINRVRRPL
                     KEGHRWYGYPRYLFVNQSADIHRLCGQALDRLGVAWRFSKPTTISVARHEAVARLDVF
                     VGPKY"
     gene            complement(1147..>1494)
                     /locus_tag="VFD73_08470"
     CDS             complement(1147..>1494)
                     /locus_tag="VFD73_08470"
                     /inference="COORDINATES: protein motif:HMM:NF013645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74051.1"
                     /translation="GTVVVLGKIGRNFAAGMSGGIAYLLDPDLARVNTQMVDLEPLNA
                     SDGALLQRLVERHRAETGSAVAGELLAGWERALARFVKVMPKDYKRVLDAASRAELEG
                     RDVNEAVMAAAHG"
BASE COUNT          264 a          496 c          472 g          262 t
ORIGIN      
        1 tgccatgcgg agacaccagc ccgaacacgc cccggtaact cgtcggcagc gggcaatgca
       61 cccgggcaac tcctttcggg tatctccagc cgcctcgtga ggtcaaggcc gatcaccgtc
      121 tcattctcgg cgagcgccac gcgaagcggg cctggcccac tcctcgaact ggccagaagc
      181 ggtacattaa cagtcggggg ccgcccaggg ggtcggccct ggccccggta atccaacggc
      241 agagatgatg gtctcaaaag ccataaagtg tgggttcgaa tcccacccgg ggcacaattc
      301 gaggactcat cagaatgtca gcggttgctg agaacatgtt ctcatgtacc ctcaagctac
      361 tgtcgatatt gcaaagagcc tgtccgacct aggaatatta gatcgggaga acgccgaaat
      421 ctgcggcgtt tcagtggcag ccatcaggca ttggcggcgc ggcagtcggc gcagcgggga
      481 gagatctggc ccgcgttgcc cgcgctgcga cagtcggccg ctcgatgaca gcgcctacgc
      541 gtatctgctc ggtctttatc tcggcgacgg tcacctgacc gtgagcagga aagctgtctg
      601 ggcgctatcg atcacatgct gtgacggctg gcccgggctg atggtgcaag cccggctggc
      661 catgtccgtg gtcatgccct cctccaaggt attcaccgtt gccagaacgg gttgcaccga
      721 ggtcaagagc acatccaagc actggctgtg cctgttcccc cagcatgggc cgggcatgaa
      781 acaccagcgc gtgatcgaat tggagccgtg gcaggagcgg atcgtggcag agtatccggg
      841 tgacttcgcg cgcggcctct ttcactccga cggataccgc gggatcaacc gggtccggcg
      901 gccgctcaaa gagggtcacc gatggtatgg gtatccgcgt tatctgttcg tgaaccagtc
      961 ggcagacatt caccggctct gcggccaggc gctggaccgg ctgggagtgg cgtggcggtt
     1021 ttccaagccg accacgatct cagttgcccg gcatgaggcc gtggccaggc tggacgtgtt
     1081 cgtcggcccc aagtactgag ccgagcctga atcaccccag gggtgaagaa gcgggagctg
     1141 cccacctcac ccgtgcgctg cggccatgac cgcctcgttg acgtcccggc cctccagttc
     1201 ggcgcggctg gccgcgtcca gcacccgctt gtagtccttg ggcatgacct tgacgaaccg
     1261 cgccagcgcc cgctcccacc cggccagcag ttccccggcc accgccgagc cggtctccgc
     1321 ccggtgccgt tccaccagcc gctggagcag ggccccatcg cttgcgttca gcggttccag
     1381 gtccaccatc tgcgtgttca cccgcgccag gtcggggtcg agcaggtagg cgatcccgcc
     1441 ggacatgccg gccgcgaagt tgcgaccgat cttgcccagc accaccacgg tgcc
//
LOCUS       DASRPQ010000736         1295 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3532661, whole genome shotgun sequence.
ACCESSION   DASRPQ010000736 DASRPQ010000000
VERSION     DASRPQ010000736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3532661"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            531..845
                     /locus_tag="VFD73_08475"
     CDS             531..845
                     /locus_tag="VFD73_08475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74052.1"
                     /translation="MAGWSSEAELFRLTRDRSLRLTDLCAELGRDPVALRRSLVCFPP
                     MRPWASTGAFTDMVGRYQSIGINEFVLYWPRTWDSRASQEDTVFEHVMSDVAPGLKGG
                     PR"
     gene            964..1086
                     /locus_tag="VFD73_08480"
     CDS             964..1086
                     /locus_tag="VFD73_08480"
                     /inference="COORDINATES: protein motif:HMM:NF038356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DLW-39 family protein"
                     /protein_id="HZI74053.1"
                     /translation="MKKLLILIVVVLGGFAVWRKVQAQRADLDLWSEATSSDDY"
BASE COUNT          236 a          404 c          411 g          244 t
ORIGIN      
        1 cgatgccgag gccaacggtg aagatgaggt agccgacgaa ggccccggcc aggccgagga
       61 ggagcgaaac cagccacgag cgcgggccct tcatgttccg gaacgcatcg ttaggaacga
      121 gtatgcgggc cacgattccg cagaacaatc cgagaaatag cgctccgatc atgcttactc
      181 ctgatatgga cggatgtatg cctttgcgct taccacgacg caccgcgagg tggtgaacta
      241 caggaaatta cacccgaggc ttgtggcgct cactcggaga acatatggag accacgtgta
      301 ggtatcgccg cttatcaccc cgcctttctc aattgagccg acctacgcac tggccgctaa
      361 catcgggatg acgcttgaaa cgcggagtgg tggctgagct gcgtttttgc ttgtatcagt
      421 accagcacct gccgctgcct gagcttcggt cggcacgctg gtctccagca tgtacttccg
      481 cagcccggta accctggcca aggccacgat gacggtcgac cacctctcca gtggccgggt
      541 ggagctccga agcggagctg ttccggctca cccgtgaccg gtctctgcgg ctcacggact
      601 tgtgcgcgga gttgggccgc gacccggtcg cgctgcgtcg gtccctggtg tgcttccccc
      661 cgatgcggcc ctgggcctcg actggggcgt tcaccgacat ggtcgggcgc taccagtcca
      721 tcggcatcaa cgagttcgtc ctgtactggc cgcggacctg ggactcgcgg gcaagccagg
      781 aagacaccgt gttcgagcac gtcatgtccg atgtcgcgcc cggcctcaag ggaggccccc
      841 gttgagtggg cggcaggcct acgtcgcgct gctgtactgc tggcgcaaga ttctcagaaa
      901 ctaagcgcag gtcgttgcaa cagcttgagc aggacctgac cgggcgagcg gtaggctagg
      961 cgaatgaaaa agctgctcat cctcatcgtg gttgttctcg gcggtttcgc ggtgtggcgg
     1021 aaggtccagg cccagcgcgc tgaccttgac ctctggagtg aggcgacgtc ctccgacgac
     1081 tactgacatc tgctgaccgc tgacgcgacc ggcgctgacc cctcttaggc gcgtgcgatg
     1141 actgatacac ccccgatctc actggtctgc ttcgacctgg cgagcatcgt catcgacggt
     1201 tccattgtcg agcgagcgtt cgccgaggcg atcgcgacgc agggaatcgt cgcgggaacg
     1261 caggactacg cccgcgctat ggtcaggttc gaccg
//
LOCUS       DASRPQ010000737         1978 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3227795, whole genome shotgun sequence.
ACCESSION   DASRPQ010000737 DASRPQ010000000
VERSION     DASRPQ010000737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1978
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3227795"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1860)
                     /locus_tag="VFD73_08485"
     CDS             complement(<1..1860)
                     /locus_tag="VFD73_08485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74054.1"
                     /translation="MSYRTAGSGPVLLLIIGIGCVPGTPERQGRSGEVPWSARQPPLG
                     LVSSGASVAVASARERASPPIAGTSDSLPQHVEPVLAFPEPGLDDTAAYQGYQTRFYR
                     DSKGNTVQIYLQRRSGRAVLVWADAANESAGFTVRDAAGRPADLDWGAKPATISESGS
                     SRALEYQLAAQTSSIELGWFVLGSMRIERDFVYAKRDQLPYRAAPVRVAEESLLVAAV
                     ERLPSSERQQHLSLLHATSVAQLQSRLLPAITTSHDDSSSTIRVERPSLDGRNHLSLE
                     LRVDPRKTKVGVRGDVVSLRTRPGSAVRFSVRVTTDAAPLTPLTRQRIFTSDFLAFVA
                     RGAGESDSAEMAHRRLERQVRGVELLSSEEKLMAGLPNFATYFGRDMMMTALMMRPIW
                     QPVMSEHVIASVLRKLGPNGDVSHEEALAGQAIREHAAIYDSLINVYTVAMRRQQKDN
                     AADALQQATGVLRDLQKTRENYHMIDDEFQLPVLTARYLADSTVPADRKREFLLERSD
                     SGESRLALLLKELALVASLSRPYAEAPRATNLVSFPKRDSSHWRSASWRDSDAGYAGG
                     RFAMDINVIWVPNALRAISTILDMIPKMGLSQGVLDSLGTSYRGTPLEGYLRDR"
BASE COUNT          344 a          631 c          660 g          343 t
ORIGIN      
        1 gcggtcgcgg aggtagcctt ctagcggtgt gccccggtag ctcgtgccga gcgagtcgag
       61 aacgccctgg ctcaagccca tcttgggaat catgtcgagt atggtgctga tcgcccgcag
      121 ggcattggga acccagatca cgttgatgtc catggcgaag cgaccgccgg catacccggc
      181 gtcgctatcg cgccagctgg ccgagcgcca atggctcgaa tcgcgcttgg gaaagctgac
      241 cagattggtt gcgcgaggtg cctctgcata gggccgtgac aacgaagcca ccagggctag
      301 ctccttgagc agcagtgcca gacgggactc cccgctgtcc gagcgctcca gcaggaactc
      361 gcgcttccga tcggcgggca ccgtggaatc ggcgaggtag cgggcggtga gtaccggcag
      421 ctggaactcg tcgtcgatca tgtgatagtt ctcgcgagtc ttctgcagat cgcggagcac
      481 gccagttgcc tgctgcagcg cgtcggcggc gttgtccttc tgctgccggc gcatggcaac
      541 cgtgtacacg ttgatgagtg agtcatagat cgccgcatgc tcccggatcg cctggcccgc
      601 gagcgcctct tcatgactca cgtcaccgtt gggacccagc tttcggagca cgctcgcgat
      661 gacgtgctcc gacatgaccg gctgccagat cggccgcatc atgagcgcgg tcatcatcat
      721 gtcgcggccg aagtaggtcg cgaaattggg caagcccgcc atgagcttct cttccgagct
      781 gagcagctcg acaccgcgga cctggcgctc gaggcgccgg tgggccatct ccgcgctgtc
      841 gctttctccc gctccccgtg cgacaaaggc gagaaagtcg gacgtgaaga tccgctgccg
      901 agtcagcggg gtgagcggcg cggcatcggt cgtgaccctg accgagaagc gcactgccga
      961 cccgggccgg gtgcgaagcg agaccacgtc gccgcgcacc cctaccttgg tcttccgagg
     1021 atccactcgg agctccaggc tcagatggtt gcggccgtcg agagagggac gttccacccg
     1081 tatggtcgag ctgctgtcgt catgcgaggt ggtgatggca ggcagcagtc gggactgcag
     1141 ttgggccacg ctggtggcat gaaggagcga gagatgttgc tgccgctcgg atgatggcag
     1201 acgctcgacg gccgcaacca ataacgactc ctcggccacc cggaccggag cggcacgata
     1261 ggggagctga tcgcgcttgg cgtaaacgaa gtcacgctcg atgcgcatcg agccgagcac
     1321 gaaccagccg agctcgatgc tggaggtttg cgcagcgagt tggtactcga gcgcccggct
     1381 actgcctgac tcggagatcg tggccggctt cgcgccccag tccaggtcgg ccgggcggcc
     1441 ggcagcgtca cggacagtga acccggcgct ctcgttggcg gcatccgccc acaccagtac
     1501 tgcccggccg ctgcggcgct gtaggtagat ctgcaccgtg ttgcccttgc tgtcccggta
     1561 gaagcgggtc tgatatccct ggtaggcagc ggtgtcgtcg agtcccggct cgggaaaggc
     1621 aagtactggc tcaacgtgtt gcggaagaga atcgctggtt ccggcgatcg ggggagaggc
     1681 cctttcgcgc gccgacgcaa ccgctacgct tgcgccactc gacaccagac ccagaggtgg
     1741 ctgacgcgcg ctccagggca cctcgcccga ccgcccctgt ctctccggag tgcccggtac
     1801 acaaccgatt cctataatca gcaagagcac cggcccggag cccgcggttc gataactcat
     1861 cggccgctcc cgctctggtg cggaaccatc cggcggcctg cggaatccac aatgacatcg
     1921 tagcgtttcc cgcgggaata aagatttcgc agggtcagcc gggtgatgct ggacggca
//
LOCUS       DASRPQ010000738         1520 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4477425, whole genome shotgun sequence.
ACCESSION   DASRPQ010000738 DASRPQ010000000
VERSION     DASRPQ010000738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4477425"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(198..527)
                     /locus_tag="VFD73_08490"
     CDS             complement(198..527)
                     /locus_tag="VFD73_08490"
                     /inference="COORDINATES: protein motif:HMM:TIGR02118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EthD family reductase"
                     /protein_id="HZI74055.1"
                     /translation="MAGAKIMVLYPTPRDPAAFERAYREEHSPMVTPRSFPGLTRFVA
                     SRITATADGGRAPFARVAELHFPSLQALQKAAATDGAKRAVAHAISISTGGPPQFLIA
                     EEETTTF"
     gene            complement(937..>1520)
                     /locus_tag="VFD73_08495"
     CDS             complement(937..>1520)
                     /locus_tag="VFD73_08495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI74056.1"
                     /translation="HQAAALVLSGVPPWPIRTQQRLNRPSQPRAPYSHDSLPEGVRER
                     RDALEAASRAYQEAIEAWMRARQDSMEAGLLPQPTWDSASSVRYALNLDRRLARRLGE
                     GCPAARAGVYASFRHGPSLADLRSITVPVLIVRGTRTNLVGDGSAALLQTLGNGQLVT
                     LMGAGHDPWFDRPTQFFAHVERFLQRSVFALTT"
BASE COUNT          272 a          493 c          496 g          259 t
ORIGIN      
        1 cactgcccag cagtgccggg agcagagtgt cgagctcggg tcgcgcctct tcccttggct
       61 tccgacccgc tgaagcgcag gccatcgcac ccacgaacgc gatggaaacg agcttgtggc
      121 gtctccgccc cggccgaccc cgacctgtgc tcatgtgccg gttagatggc gcacggcgcg
      181 gcagggttga ccggcgacta gaacgtcgtg gtttcctctt ccgcgatcag aaactgcggt
      241 gggccgccgg tcgagatgga gatcgcgtgc gccacggcac gtttcgcacc gtcggtggcg
      301 gcggcctttt gcagcgcctg cagcgacgga aagtggagtt ccgcaacccg ggcgaacggc
      361 gctcgtccgc catccgccgt cgccgtgatg cgagacgcaa cgaagcgggt caggcccggg
      421 aagctgcgag gcgtcaccat cggagagtgt tcttcccgat acgctcgctc gaatgccgcc
      481 ggatcgcgag gagtgggata gagaaccatg atcttggcac ctgccataac gcctccactg
      541 tctgagtgac acttatgtgc tcgcgagccg agccagcgtg agtcgtaatg agactcgccg
      601 ttctcggcaa gagttcaccc agtttcttca tccacacccg gagcccattg agccgcggcc
      661 gctccactcg ttcgatcgca tggcgggcga tacccagagt atttccccgg gaccggccgt
      721 agagagtgtc cgccctcacg gacggcgcgg ccaacacggt cgaccctcgg cccggtgccg
      781 agacccgcag ggatgacggc aaggccggcg tcggtgtcgt cgggagctgg tagggctccc
      841 agcgggtaca agccatcagg aagaagatgg cgccgcagac gcaggctcgg gtgaaatccc
      901 ggttcatctc cactccagag tgcaaatagc agagatctac gtcgtcagtg cgaacaccga
      961 gcgctgcagg aatcgttcga catgagcaaa gaactgggtc ggtcggtcga accacggatc
     1021 gtggccggct cccatcaggg taaccagctg cccgttcccg agcgtctgca agagtgcagc
     1081 cgacccatcg cctacgaggt ttgtccgcgt tccccgcaca atgagaactg gtacggtgat
     1141 cgagcggaga tccgccaggc tcgggccgtg gcggaagctg gcatacacgc cagcccgggc
     1201 ggcgggacaa ccctcaccca accgcctggc aagtctgcga tccagattga gggcgtagcg
     1261 cacgctgcta gccgaatccc atgtcggttg gggaaggagg cccgcttcca tcgagtcttg
     1321 tcgcgctctc atccacgctt ctatggcctc ctgatacgct cggctagcgg cttcgagcgc
     1381 gtcccggcgc tcccgtaccc cctcaggaag tgaatcgtgg gagtagggag ctcggggctg
     1441 cgaaggccga ttcagtctct gttgcgtcct gatcggccag ggcggcactc cgctcagcac
     1501 gagcgcggca gcctggtgtg
//
LOCUS       DASRPQ010000739         1361 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3851261, whole genome shotgun sequence.
ACCESSION   DASRPQ010000739 DASRPQ010000000
VERSION     DASRPQ010000739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1361
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3851261"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            801..1097
                     /locus_tag="VFD73_08500"
     CDS             801..1097
                     /locus_tag="VFD73_08500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74057.1"
                     /translation="MTGSTQTIATKKGDHLQKTRLKVLDLGQEAAGGDVYWIDFLAEA
                     ALAEDELRQIARQQVTVEVRRMYASSGKNGGSFLNANGGAIRLGDQVVQRGLRV"
BASE COUNT          259 a          414 c          467 g          221 t
ORIGIN      
        1 ccagtccttc cgtctcacgc acctgggctg ctacgtagtg cggcgcctgt tccgtctcgt
       61 gccagccgac gacgaccgca ggcaggagct cgagttcacc aagatgcgtc agctcatgca
      121 caacgattgg gagactcgcg actagcctcc cacaccttcc gactgccgct gagcgctgcc
      181 catggctgca aatggcttcc ctggcgtgtg ctcggcgttc cttctcggtc cacggacctt
      241 tgcctcgtgc atgggtccgt ttttgttgcc gcgacgacgc gacgagacgg gaggtgattg
      301 accacatgcg gaggcagatc acgcagcgaa ctcggaccag tcggacgtgc cgctccccat
      361 ctcgttaccc gtgccgggtc aatccaggta atccgaccct gcactactgg acaccagcgc
      421 ccgccgcgac gccgggatgg ttcacctgcg gctgcggggc ggttggcgtg tgcgagggat
      481 gcctggccaa gagcagcggc aagagagaag gagagggagg aggagggcaa ggcggacagc
      541 ggccggccgc ggcggtcgcc atctggtgcc ggcagcacca cgagacggtc tgcggtaagc
      601 gcatgccgct ctcgagtgca gcctgtctgg cggtgtagtt gaccactcgt cgagcgtcac
      661 ggcatcgtcg agcgtccggc aagggcagtc agggcagatg cgccaacggg cgcatcggtc
      721 gttcaggggg ccttccccca aacagcagag gcacaaacga gagagaaagg gactgaccga
      781 tgcaactcag cggacagatt ttgaccggca gcacgcagac gatcgccacc aagaaagggg
      841 atcacttgca gaagacgcgg ctcaaggtgc tcgacctggg ccaggaggcg gccggcggtg
      901 atgtgtattg gatcgatttt ctggccgagg cagcgctcgc tgaggacgag ctgcgtcaga
      961 tcgcgcgcca gcaggtgacc gtcgaggtcc gccgcatgta tgcctcgagc ggcaaaaacg
     1021 gcgggtcgtt cctcaacgcc aatggcgggg caatccgcct gggtgaccag gtggtgcagc
     1081 gcgggctgcg cgtctaggca gcgctgattg cccgcgatca gcaccgatcg acaggcaggt
     1141 aggaagacag gcgacggtgc agtggcgggg atgttcggcc atgcggttgg gcatccccgc
     1201 tgcatcatca gggcagggaa aggcaggcat acggcatggc gacgacgcgg acaccgacga
     1261 cggaactgga tgggcgggca gcatcgcgtg cggatgacgc gcacaccttg cccaggtggg
     1321 tgaacttcat ccaagataac ctgtttctct ccttcctcat c
//
LOCUS       DASRPQ010000740         2694 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4159829, whole genome shotgun sequence.
ACCESSION   DASRPQ010000740 DASRPQ010000000
VERSION     DASRPQ010000740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2694
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4159829"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(385..1821)
                     /locus_tag="VFD73_08505"
     CDS             complement(385..1821)
                     /locus_tag="VFD73_08505"
                     /inference="COORDINATES: protein motif:HMM:TIGR00804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005337 - nucleoside transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015858 - nucleoside transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HZI74058.1"
                     /translation="MAKPTLRVVVLAVLLTAAALLTSWLVPGFAYRGVTQVLAQTTSP
                     FAGAVQGDSQKLLPAPPAPAPTSVEPPGILTRLTGIFGIIVILAIAIALSHHRRQIRW
                     RVVAWGLALQLLFAIFVLRIPAGQQLFRALGAFVTAILSYSYVGSQFVFGELGKPNSS
                     LGVIFAFQLLPAIIFVSALFAIMYYLGIMQLIVRAFALLMSRVMGASGAESLNVAASI
                     FMGQTEAPLTIRPFLSTMTRSELMTVMTSGMAHISGSIMVAYIAFGIEARHLLTAVIM
                     TAPGTIMMAKLFEPETEIPETYGKVRLDMPKQDVNLLDAAARGTGEGLTLMLNVIAML
                     VSFVALVALINGGFGAIHRYIEWFPANLQTVLGWIFRPIAWVMGVPWHDSGTIGSLLG
                     TRMVLNEFIAYAQLGTMKAQLDPRSFTIASFALAGFANFSSVGIQLGGIGALVPERKH
                     DLARLGLRAMLAGTLANFLSATIAGILI"
     gene            complement(1972..>2694)
                     /locus_tag="VFD73_08510"
     CDS             complement(1972..>2694)
                     /locus_tag="VFD73_08510"
                     /EC_number="3.5.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF013155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase family protein"
                     /protein_id="HZI74059.1"
                     /translation="RYCPQLSTREGLTLNQVVEAELRGLGRGEREFGVVARVINCSLR
                     QYKPAVSVEIAEHSVGFRNRGVVAFDLAGPESGRPPGKHKAAFDLAARGYLGITVHAG
                     EAAGAESVAEALQQCHANRIGHGTRLGESTELMDYIRDHQVPVEINITSNVQTRAVAR
                     ASEHPVRRYFDAGLNVTLCTDGWLMAGVSLSDEYWLAHTELGFTRPEIDQLILNGFES
                     AFLPWPERSRLVGRVREELAGM"
BASE COUNT          534 a          828 c          862 g          470 t
ORIGIN      
        1 aaagccgagt cccgatccga gcaccagtcc gatgcgtgga cgcctggagc cgacgcggag
       61 ccggatctct gccgcagccg cttcgatgtc gctcaagcgt tgaccatagg acaattcacc
      121 acagagggct tggaggacac agagggaacg tcttcacaag tagtcctcgc tctcccgctt
      181 cggcgacctc gaaagcgttt ttggtggcga tccggcgcgg tgctgctcat gtaatcggag
      241 cgcacaacaa ataagcatga tctatgtggt gcgagtacga ggatttcatg cggcatcgga
      301 gccctctgtg ccctctaaac cctctgtggt gaatcttgag cagatggtcg ggtagaagcg
      361 gatctactct gcggagccag gcactcagat cagaatcccc gcaatcgtcg cggagagaaa
      421 gttcgccagc gtccccgcga gcatcgcccg aagcccaagt cgcgcgaggt cgtgtttccg
      481 ctcgggtacc agcgctccga tcccgccgag ctgaattccc accgagctga agttggcaaa
      541 acctgctagc gcgaacgaag caatggtaaa cgatctggga tcgagttgcg ccttcatggt
      601 gcccagttgg gcgtaggcga tgaattcgtt gagcaccatg cgggtgccga gcaaactgcc
      661 gatggtgccg ctgtcatgcc agggaacgcc catcacccat gcaatgggac ggaagatcca
      721 gcccagtaca gtctgcagat tggcgggaaa ccattcgatg taccggtgga tggccccgaa
      781 gccgccgttg atcagcgcga ccagtgcgac gaaggacacc agcatcgcga tcacattgag
      841 catcagcgtg agaccttcgc cggtaccgcg ggccgccgca tcgagcaggt ttacgtcctg
      901 cttgggcatg tcgagtctca ccttgccata ggtctcgggg atctcggtct ccggctcgaa
      961 cagcttggcc atcatgatgg tgcctggcgc cgtcatgatg acggccgtga gcaggtgccg
     1021 ggcctcgatt ccgaacgcga tgtacgccac catgatcgag ccggagatgt gagccatccc
     1081 cgacgtcatc accgtcatca gttccgaccg ggtcatcgta gagaggaacg gacggatcgt
     1141 gaggggtgcc tcggtctgcc ccatgaaaat cgacgctgcg acgttcaggc tttccgcccc
     1201 gctggccccc attactcggc tcatgagcaa ggcgaatgcg cgcacgatga gctgcatgat
     1261 gccgagatag tacatgatgg cgaacagcgc gctgacgaag atgatcgcgg gcaggagctg
     1321 aaaggcaaag atgacgccga ggctggagtt cggtttgccc agctcgccga agacgaactg
     1381 cgagccgaca taggagtagc tcaggatcgc agtcacgaag gcgccaaggg cgcggaacag
     1441 ctgctggccg gcgggaattc ggagcacgaa tatggcaaag agcagttgca gcgcgagacc
     1501 ccaggccacc actcgccagc ggatctgtcg ccgatggtgg gacagcgcga tggcgatggc
     1561 aaggatgacg atgatgccga agattccggt cagccgggtg agaataccgg gaggctccac
     1621 cgatgtgggc gccggagccg ggggtgcggg caaaagcttc tgcgaatcac cctgaaccgc
     1681 gcccgcaaac ggcgatgtgg tctgggccag tacctgagtg acgccgcgat aggcgaatcc
     1741 cgggacgagc caggaagtga ggagagcggc agctgtgagg agaacagcaa gcacaacgac
     1801 gcgcagggtc ggttttgcca tgtcgttctc tgttagaggt aggataaagt cgagagcccg
     1861 ggtcggaatg cagtcgagag ggcgcgatgg ctgctagact ctcgactttc gactttggac
     1921 tcgtgactcg cgactcgtga ctcgcgactc gcgactcgcg actttctctc tctacatccc
     1981 cgccagctcc tcgcgcactc ggccaaccag gcggcttcgc tcgggccagg gcaggaacgc
     2041 gctctcgaac ccgttcagaa tcagctgatc gatctcgggc cgggtgaagc cgagctccgt
     2101 gtgcgccagc cagtactcgt cgctcaggga taccccggcc atgagccagc cgtcggtgca
     2161 gagcgtgaca ttgagtccgg cgtcgaagta gcgtcgcacc gggtgctccg aggcccgtgc
     2221 caccgcccgg gtctgcacgt tgctggtgat gttgatttcc accgggacct ggtggtcgcg
     2281 gatgtagtcc atcagctcgg tgctctcgcc caaccgagtg ccatggccga tccggttggc
     2341 gtggcattgc tgcagtgctt ccgccaccga ttcggcgccg gccgcttcgc cggcgtggac
     2401 cgtgatcccg aggtaccctc gggcagcgag atcgaacgcc gccttgtgct ttcccggcgg
     2461 ccgacccgac tccgggcccg caagatcgaa cgccaccacg ccgcgattcc ggaacccgac
     2521 cgaatgctcc gcaatctcca ctgatacggc cggcttatac tgccggagcg agcagttgat
     2581 gacccgggcg acaactccga actcccgctc gcctcggccc aggccccgga gctccgcctc
     2641 gaccacctgg ttcaacgtca gcccctcacg ggtgctgagc tgggggcagt agcg
//
LOCUS       DASRPQ010000741         1437 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1340680, whole genome shotgun sequence.
ACCESSION   DASRPQ010000741 DASRPQ010000000
VERSION     DASRPQ010000741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1437
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1340680"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(268..344)
                     /locus_tag="VFD73_08515"
     tRNA            complement(268..344)
                     /locus_tag="VFD73_08515"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(308..310),aa:His,seq:gtg)
     gene            complement(347..417)
                     /locus_tag="VFD73_08520"
     tRNA            complement(347..417)
                     /locus_tag="VFD73_08520"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(383..385),aa:Val,seq:tac)
     gene            complement(419..491)
                     /locus_tag="VFD73_08525"
     tRNA            complement(419..491)
                     /locus_tag="VFD73_08525"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(456..458),aa:Arg,seq:acg)
     gene            complement(496..569)
                     /locus_tag="VFD73_08530"
     tRNA            complement(496..569)
                     /locus_tag="VFD73_08530"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(533..535),aa:Asp,seq:gtc)
     gene            complement(574..645)
                     /locus_tag="VFD73_08535"
     tRNA            complement(574..645)
                     /locus_tag="VFD73_08535"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(611..613),aa:Asn,seq:gtt)
     gene            complement(647..721)
                     /locus_tag="VFD73_08540"
     tRNA            complement(647..721)
                     /locus_tag="VFD73_08540"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(687..689),aa:Met,seq:cat)
     gene            complement(723..794)
                     /locus_tag="VFD73_08545"
     tRNA            complement(723..794)
                     /locus_tag="VFD73_08545"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(759..761),aa:Glu,seq:ttc)
     gene            complement(805..878)
                     /locus_tag="VFD73_08550"
     tRNA            complement(805..878)
                     /locus_tag="VFD73_08550"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(842..844),aa:Glu,seq:ctc)
     gene            complement(883..954)
                     /locus_tag="VFD73_08555"
     tRNA            complement(883..954)
                     /locus_tag="VFD73_08555"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(919..921),aa:Arg,seq:tct)
     gene            complement(961..1033)
                     /locus_tag="VFD73_08560"
     tRNA            complement(961..1033)
                     /locus_tag="VFD73_08560"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(998..1000),aa:Lys,seq:ttt)
     gene            complement(1086..1164)
                     /locus_tag="VFD73_08565"
     tRNA            complement(1086..1164)
                     /locus_tag="VFD73_08565"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1127..1129),aa:Ile,seq:tat)
     gene            complement(1169..1242)
                     /locus_tag="VFD73_08570"
     tRNA            complement(1169..1242)
                     /locus_tag="VFD73_08570"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1206..1208),aa:Met,seq:cat)
     gene            complement(1233..>1437)
                     /locus_tag="VFD73_08575"
     CDS             complement(1233..>1437)
                     /locus_tag="VFD73_08575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74060.1"
                     /translation="IMESEPARVPGLAANECAGDTVRFDFFFIITGDMVYYLTPVEEI
                     AGLTEVSLNTLQHRKVSNLLMAA"
BASE COUNT          280 a          462 c          412 g          283 t
ORIGIN      
        1 tgcgggacga aacttcgccc cgtattcgcc aggtcagttc ggtccgcggc aaccgcccac
       61 gccagcccat ggcgctgacc tgcagaaact gcgagcgggc cgatcagcca gcggtgttgc
      121 ggaccgctcc cttaagaggg actcataact ctccagaacc cagtctgacc tgggcatttg
      181 atggtggcag gtgttgggtt cgaaccaacg taggctgagc cgacggtttt acagactgct
      241 cccatgccgt ctcgggtcac gctggcctgg ggtgaccgga gggactcgta ccctctctaa
      301 ccggcttcac gggccggctc ctcgaccgct ttggattcgg ccaccgtagc cagcgaagga
      361 atcggaccct cgtttcctgt ttgtaagaca ggcgctctcc cattgagcta gccggccgcg
      421 cgtccagcag gagtcgaacc tgcactcccc agattcgtag tctggtgcct tatccattgg
      481 gccatggacg cagagcggga tctacgggac tcgaacccgc ggcctccgga ttgacagccc
      541 ggtgctctaa ccgactgagc taagacccca cggctctcgc gggaggattc gaacctccac
      601 acttcggatt aacagtccgc tgccctgcca ttaggccacg cgagattggt agcgcaggag
      661 ggactcgaac ccccatcgcc cggattatgg gcccggcatg ttcccgttac accaccgcgc
      721 agtagcccca gacggttccg acccgtctcc ctcggcttga aaggccaaga tcctagccat
      781 tagacgatag ggccatgtac tgcgtgctcc gtgcggggtt cgaacccgca gtctccaggt
      841 tgagggcctg gcgagatgtc cgtttactcc aacggagcac ggcgcgtcgc cggggagtcg
      901 aaccccgatc gtccgcttag aaggcgggcg cgctttccgt tacgccagcg acgcatgacg
      961 caggccgcca gggaatcgaa ccctgaaccg tgagattaaa agtctcccgc tctgaccgtt
     1021 gagctagcgg cccctgctgc ctataagcag gcccggttta ctcatcatcg gcattctcct
     1081 tctcgtaggc cgggcaggac ttgaacctgc ggctgattcc cgagatatag gctcggcgct
     1141 ctcaccaaac tgagctaccg gcccgcggta gcgacgactg gatttgaacc agtgacatcc
     1201 cgatcatgag tcgggcgctc tgaccggctg agctacgccg ccataagtaa attgcttacc
     1261 ttacgatgct gcaaagtatt taggcttacc tcggtcaatc cggcgatctc ctcaacaggg
     1321 gtgagataat acaccatgtc gccggtgatg ataaaaaaga agtcgaatct cacggtgtca
     1381 cccgcgcact cgttagcagc gaggcccggc accctggccg gttcgctctc catgatt
//
LOCUS       DASRPQ010000742         1144 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_88278, whole genome shotgun sequence.
ACCESSION   DASRPQ010000742 DASRPQ010000000
VERSION     DASRPQ010000742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88278"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            278..430
                     /locus_tag="VFD73_08580"
     CDS             278..430
                     /locus_tag="VFD73_08580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74061.1"
                     /translation="MHEKADAPTGHRNRAKRWHLALLWSAGMVLLALGAAVMVIGAYL
                     VGASGR"
     gene            592..>1144
                     /locus_tag="VFD73_08585"
     CDS             592..>1144
                     /locus_tag="VFD73_08585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74062.1"
                     /translation="MGIAATVWVPLVAAGAGLVAGIGAAMGAAIWAQRRTDFREDDRW
                     RRERGDRQDQWERERDDRWDQWQREDSLRWRQERQQAYARLIAALYEWDDKLASARAA
                     RTDDANSGEQGEPDTAGLERSATAARQIVPLVQFMAPKTVGALARSAIQDRKVFRITC
                     LEAKPIDDADLDEKWKHLLENRSE"
BASE COUNT          214 a          357 c          402 g          171 t
ORIGIN      
        1 tcatctgcgg tgaagctggt gcaggctgct cagccgttcc cagggccaag ggccgcgatc
       61 gaacgggccg cagaggtcca cctgcacttt gcccggcgtg agcgccaagg acatcgccgc
      121 catcctcgcc caggacctgc gcaacccgat gtcaaccggc aaagccgccg tacgtcccat
      181 aacacccgca gatcgtggga gcccgcggcc gagaggggga ccacggggtc ccacgatcac
      241 gcaagaggga tccggagtcc ctgctgacag gcagaccatg cacgagaagg cggacgcgcc
      301 tacgggccat cgcaatcggg cgaagcggtg gcatctggcg ctgctctggt cggccgggat
      361 ggtgctgctg gccttggggg ctgcggtcat ggttatcggc gcctacttgg tcggcgcatc
      421 tggccggtga ccgacgctcg tgctggggtc ggtaccacac tggcgggtac ctgccctggt
      481 gccagggcac cgtccgccag atgcacctct gcacccgtag attcaccgca cctcagccgc
      541 gggaagcgct gaccagttgg cacgagggtg tccggcaccg atgatttgag gatgggcata
      601 gctgcgacgg tctgggttcc gttggtagcc gcaggagccg gcctcgtcgc cggtatcggt
      661 gccgcaatgg gcgcagcgat ctgggcgcag cgacgcaccg acttccgcga ggacgatcgg
      721 tggagacggg agcgcggcga ccggcaggac cagtgggaac gggagcgtga tgaccgttgg
      781 gaccaatggc agcgggagga ctctttgcgc tggcgtcaag agcggcagca ggcatacgcc
      841 cgcttgatag cagcgctgta tgaatgggat gacaagctag cttccgcacg ggcggcccgc
      901 acggacgacg cgaattccgg cgagcaggga gagcccgata ccgccggcct agagcgcagc
      961 gccacggccg cccgccaaat tgtgcctctg gtccaattca tggccccgaa gacggtcgga
     1021 gcgctggcga ggagtgccat acaggaccgc aaggtcttcc ggatcacgtg cctggaagcc
     1081 aagccgatcg acgatgctga tcttgacgaa aaatggaagc acctgcttga gaacagatcc
     1141 gagc
//
LOCUS       DASRPQ010000743         1168 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2606540, whole genome shotgun sequence.
ACCESSION   DASRPQ010000743 DASRPQ010000000
VERSION     DASRPQ010000743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2606540"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1168)
                     /locus_tag="VFD73_08590"
     CDS             complement(<1..>1168)
                     /locus_tag="VFD73_08590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74063.1"
                     /translation="IDPPRIKKAKESLLPLLDYYVRLLEQRAQSAGAAPEEAREPQFN
                     PELARRAIKVLQALAESVIVVVLVDQTTAPSVLTVRVPTRKLEVSKATWFKPWTWPVR
                     PCGRLGIDMLMPTADADRQIQVNLPAGVSLDQAPGTQDPHLDIAVDLPQPWQDLSVSL
                     EQVFASHDDASPAAVVNALVDLSRVKSAAALRTLRPYEVRGSSNQRPPTTDYREVADN
                     PHEALEELTAKLSWPDTPDDAALTNLRERWQQLNEFGQRFAAGTLALFRNTLADSANA
                     QTVMARADMIEDVSQRAIPRSSRFYVDVIVDDHDYFSTARSSAVMSLILMIGVLCFLF
                     FWPVVNPKAATPAPEVLAIVLTLFATVQADRIERPDRSTLRGRLFAFGNWLIAAS"
BASE COUNT          223 a          365 c          370 g          210 t
ORIGIN      
        1 gaggcagcta tcagccagtt gccgaaggcg aacagccgcc cgcgcaacgt agaccggtcg
       61 ggacgctcga tgcggtcggc ctggacggta gcgaacaagg tcagcacaat ggccaggact
      121 tcaggggccg gtgtggcggc cttgggattc acgacgggcc agaaaaacaa gaaacacaga
      181 accccgatca tcaagatcag gctcatgaca gccgaagatc tggcggtgga aaaataatcg
      241 tgatcgtcga caattacgtc gacatagaac ctggaacttc ttgggatggc tcgctgtgag
      301 acatcttcga tcatatcggc ccgagccatc acggtctgcg cattggccga gtccgccaag
      361 gtattccgga acagagcgag cgtacccgct gcgaatcgct gcccgaattc attgagttgc
      421 tgccagcgtt ccctgagatt tgtcagggcg gcgtcatctg gggtatcagg ccagcttagc
      481 ttggccgtca gctcttccag cgcttcatgc gggttatccg ccacctcgcg ataatcagtg
      541 gtcggcggcc gctgattact gctgcccctc acctcataag gtcgcagggt acggagcgcc
      601 gccgccgact tcacccggga caggtcgacc agtgcgttga ccactgccgc gggcgaggcg
      661 tcatcgtgcg acgcgaagac ctgttccagc gagacggaca ggtcctgcca tggctgcggc
      721 agatctaccg ctatgtccag gtgcgggtcc tgtgttcccg gcgcctggtc cagagatacg
      781 ccggcgggca ggttgacctg aatttgccgg tccgcgtccg cggtgggcat cagcatgtcg
      841 ataccaaggc ggccgcaggg ccggacgggc cacgtccacg gcttgaacca cgttgccttc
      901 gagacctcga gctttcgcgt aggcacccgc accgtcagca ccgagggggc agtggtctgg
      961 tccaccagca cgacgacgat gaccgactcg gccagggcct gcaggacctt gatagcccgc
     1021 cgggcgagct ccggattgaa ctgaggctcc cgtgcctcct ccggcgctgc ccccgcggac
     1081 tgcgcgcgct gctccagcag ccttacgtag taatcgagca gcggcagcag ggattccttc
     1141 gccttcttga tcctgggcgg atcgatga
//
LOCUS       DASRPQ010000744         1062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_717369, whole genome shotgun sequence.
ACCESSION   DASRPQ010000744 DASRPQ010000000
VERSION     DASRPQ010000744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_717369"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1033
                     /gene="trpS"
                     /locus_tag="VFD73_08595"
     CDS             <1..1033
                     /gene="trpS"
                     /locus_tag="VFD73_08595"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HZI74064.1"
                     /translation="HAPCVAPEWNLASRPMARVFSGIQPSGELHLGNYLGAVKTWVDL
                     QSQHDCIFCVVDLHAITQSYEPGALAARTLEMAIGLMACGLDPDRCTLFVQSHVPEHS
                     ELNWLLNTVAPLGELERQTQFKDKSQKQESIPAGLLNYPVLQAADILLYHATLVPVGE
                     DQVQHLELSREIARRWNARFKAGFFAEPQPLLSKAKRVLGLDGQAKMSKSLGNTIGLF
                     DSPEVIWEKLRPAATDPARKTRKDPGNPDICNIFTLHQGFSSAETQQDVAQKCRTAGW
                     GCLDCKRVLADNMIAALAPIRERAAELRAHPERVQEALRAGAHKAQKIASGTLADVRS
                     AMGFMPPGA"
BASE COUNT          193 a          365 c          331 g          173 t
ORIGIN      
        1 tcacgcacct tgcgtggccc ctgagtggaa tctagcttcc cggcccatgg ctcgagtctt
       61 ctccggcatt caaccctcgg gtgagctgca ccttggaaat tacctcggtg cggtcaaaac
      121 ctgggtggat ctgcaatcac agcacgactg catcttctgc gtggtcgacc tccacgccat
      181 cacgcaatct tacgagccgg gtgccctggc ggcccggacc ctggagatgg ccatcggcct
      241 gatggcgtgc ggcctggacc ccgatcgctg cacactcttc gtgcagtcgc acgtgcccga
      301 acactccgag ctcaattggc tgctcaatac ggtggcaccg ctcggtgagc tcgaacggca
      361 gacccagttc aaggacaagt cgcagaaaca ggagagcatc cctgcggggc tcctcaacta
      421 tcccgtgctg caggccgcgg acattctcct ctatcacgcc acgctggtcc cggtgggcga
      481 ggatcaggtc cagcacctcg agctctcccg ggagatcgcc cggcggtgga acgcccgctt
      541 caaggcgggc ttcttcgccg aaccgcaacc gcttctgtcc aaggcgaagc gggtgctggg
      601 actcgacggc caggccaaga tgtccaagag cctgggaaac acgatcggcc tcttcgactc
      661 gccggaggtg atctgggaga agctgcgtcc cgcggccacc gacccggcgc gcaagaccag
      721 gaaggacccc ggcaacccgg acatctgcaa catcttcacc ctgcaccagg gcttctcgtc
      781 ggcggaaacg caacaggacg tcgcccagaa gtgccggacc gcgggatggg gctgcctcga
      841 ctgcaagcgc gtgctcgcgg acaacatgat agcggcgctt gctcctatcc gcgaacgggc
      901 tgcggagctg cgggcgcatc cggaacgcgt ccaggaggcg ctccgggccg gcgcccacaa
      961 ggcccagaaa atcgcctccg gaaccctcgc cgacgtccgc tcggcgatgg gcttcatgcc
     1021 tccgggagcg tgaagcgccg attggtggtg gatctcgcgg cc
//
LOCUS       DASRPQ010000745         1797 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4478235, whole genome shotgun sequence.
ACCESSION   DASRPQ010000745 DASRPQ010000000
VERSION     DASRPQ010000745.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1797
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4478235"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..538)
                     /locus_tag="VFD73_08600"
     CDS             complement(<1..538)
                     /locus_tag="VFD73_08600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74065.1"
                     /translation="MRIGIVGSLVWDLIYGRDPLAPPVEEWGGIAYALSGLDASLSPE
                     WEIVPLIKVGRDLAAQAQTLLGGLSRLAPGARCVEVTAPNNRVVLHYQSSERRCERMA
                     GGVPGWTWSELGPMVADLDALYVNFISGFELCLGTAQALRQGFGGPIYADLHSLFLGM
                     QQDGIRVLRPLPDAPSWFG"
     gene            complement(538..1512)
                     /locus_tag="VFD73_08605"
     CDS             complement(538..1512)
                     /locus_tag="VFD73_08605"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HZI74066.1"
                     /translation="MRFVLGVDIGGTNLVVGAVAEDGSSLHALGTEPTHAEAGQSDVL
                     DRLITLAKRCLDQTLREIPGAEIVGVGVGAPGPLDTESGVVLLTPNLGWVNLPLRQII
                     HERLGLTAVLDNDANCAVLGEWWMGAARGTRNAIGITIGTGIGGGIIVEGRLFHGASG
                     CAGEIGHTTIDTEGRRCKCGNYGCLEAYASGPNIALRAVEEIKAGAVSRLASYVNGDL
                     RQVTAQTVYQAAHDGDTLALEVVNDTAKFLGTGIANLLNIFNPEVVVVCGGVTLAGDH
                     LFVPLRREVARRAFKPAVSVCRIVPCELSGTAGVYGAAKAFLDGQRNR"
     gene            complement(1490..>1797)
                     /locus_tag="VFD73_08610"
     CDS             complement(1490..>1797)
                     /locus_tag="VFD73_08610"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HZI74067.1"
                     /translation="RRATVLVTNDSAPLHLATAVGTPIVAIFGPTVPEFGFAPRRMGD
                     LTIGHEALACRPCSKHGPPTCPLGHHRCMRGLSVDRVLQAVATIASMEESRAICPRS"
BASE COUNT          338 a          615 c          564 g          280 t
ORIGIN      
        1 agccgaacca gctcggtgca tctggcagtg gccgaagcac gcgaatcccg tcctgctgca
       61 tgcccagaaa gagactgtgt agatcggcat agatcggccc gccgaatccc tgccggagcg
      121 cctgggcggt gccgagacag agctcgaagc cggagatgaa gttcacatac agagcatcca
      181 ggtcggcgac catggggccg agctcgctcc aggtccaccc gggcacaccc ccggccatcc
      241 gttcgcaacg acgctccgat gattgataat gaagaacgac ccggttgttg ggagcggtca
      301 cctcgacaca gcgggccccc ggcgcgagcc gcgacaaccc gccgagcaga gtctgcgcct
      361 gagccgcgag gtcgcgcccg accttgataa gcggaacgat ctcccactcg ggtgagagac
      421 tcgcgtccaa tcccgagagc gcatacgcga tacctcccca ctcttccact ggaggagcga
      481 gggggtcacg accgtagatc aggtcccaga ccagggagcc gacaataccg atgcgcacta
      541 ccggttccgc tgcccatcga ggaacgcctt ggcggcgccg tacactcccg ccgtgccgga
      601 cagctcacag ggcacaatcc ggcaaacgct gacagcgggc ttgaacgccc ggcgggcgac
      661 ctcacggcgc aagggaacga agagatggtc gcctgccagc gtgacgccgc cacagaccac
      721 cacgacttcg ggattgaaaa tgttcagcag gttggcaatg ccggtgccca gaaacttagc
      781 cgtgtcgttg acgacctcga gtgccagagt gtctccgtcg tgggctgcct gatacaccgt
      841 ctgcgcggtg acctggcgga ggtctccatt cacgtagctc gccagccggc tcactgcccc
      901 cgccttgatt tcttccaccg cccggagcgc gatgttgggt cccgaagcgt aggcttccag
      961 gcagccatag ttgccgcatt tacagcggcg gccttcggta tcgatcgtgg tgtggccgat
     1021 ctcgcccgcg cagccggaag cgccgtgaaa cagcctgccc tcgacgatga tgccgccgcc
     1081 gataccggtt ccgatggtga tcccgatggc gtttcgggtt cctcgcgccg cccccatcca
     1141 ccactcgccg agcacggcgc agttggcgtc gttgtcgagc accgccgtca gcccgagccg
     1201 ctcgtggatg atctggcgca acggaagatt gacccagccg agattcgggg tgagcaggac
     1261 gacgccactc tcggtatcca gcggacctgg ggccccgact ccaacaccca caatctccgc
     1321 gcccggaatc tcccggagcg tctgatcgag acatcgcttg gccagcgtga tcagccgatc
     1381 gaggacatcg ctctggcccg cctcggcatg ggtcggctcg gtgcccaggg catggaggct
     1441 cgatccgtct tccgcgactg ccccgacgac gaggttggtc ccaccgatgt caactccgag
     1501 gacaaatcgc acgcgactcc tccatactcg cgatcgttgc gacagcctgc agcactcggt
     1561 ccaccgagag accccgcata caccggtggt ggccgagtgg gcaggtcggg ggaccgtgct
     1621 tcgagcaggg ccggcaggca agggcctcat gcccgatcgt gagatccccc atccgtcggg
     1681 gcgcgaagcc gaattccgga accgtaggtc cgaaaatggc cacgatcggg gtacccaccg
     1741 ctgtggccag gtgcaacggc gccgaatcgt tggtgaccag caccgtggcg cgccgga
//
LOCUS       DASRPQ010000746         1060 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_717747, whole genome shotgun sequence.
ACCESSION   DASRPQ010000746 DASRPQ010000000
VERSION     DASRPQ010000746.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_717747"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..355
                     /locus_tag="VFD73_08615"
     CDS             <1..355
                     /locus_tag="VFD73_08615"
                     /inference="COORDINATES: protein motif:HMM:TIGR00149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HZI74068.1"
                     /translation="EVAEQVALSRVREGFVLVSAMHISASVFVNDHESGLWHDILKWL
                     EETIAPWDPERYRHNETGEDNAAAHLRSLTVGHEVIVPITGGKLDFGPWQRVFYGEWD
                     GQRRKRVVLKVLGEP"
     gene            complement(416..>1060)
                     /locus_tag="VFD73_08620"
     CDS             complement(416..>1060)
                     /locus_tag="VFD73_08620"
                     /inference="COORDINATES: protein motif:HMM:NF038114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PxKF domain-containing protein"
                     /protein_id="HZI74069.1"
                     /translation="LQATPSLQWTPGALLTGTPLGPSQLNATASGVGGVPLSGSFTYT
                     PGAGTTFTSAGTVSLSVQFAPSDPNYTSATKTVSISVSSAMTFTGFFAPVRNGPYVNV
                     ARPGSAIPFKFSIGGYRGLQILSNTPGSVQVTCPAGAPESTVLPLITGSSGLRSLGYS
                     YTYIWRTSASWAGTCRKFSLTLSDGSTHEALFRFMAAPKTNTQTNTLKRILGSR"
BASE COUNT          213 a          308 c          355 g          184 t
ORIGIN      
        1 tgaggtggcg gagcaggtgg cgctgagccg cgttcgcgaa ggcttcgtgc tggtctcggc
       61 catgcacatc agcgcatcgg tctttgtgaa cgatcacgag tcgggcctct ggcacgacat
      121 cctgaagtgg ctggaagaga cgattgcccc gtgggacccc gaacggtatc gccacaacga
      181 gaccggggaa gacaacgcgg cggcgcacct ccggagtctg accgttgggc acgaggtgat
      241 cgttccgatc accgggggca aattggactt tggcccctgg caacgggtgt tctacggcga
      301 gtgggacggg caacgccgga agcgggtcgt cctcaaggtt ctgggagaac cctgaaaacg
      361 acaaggccag aggagccact gcggctcccc tggcctcgcc aaccctgcgt ggcagctacc
      421 tgctgccgag aatgcgcttc agggtattgg tctgagtatt cgtcttgggc gcagccatga
      481 agcggaacag cgcctcatgc gtgctgccgt cagacagagt gagggagaac ttgcggcaag
      541 tgcctgccca gctggcgctc gttctccaga tatacgtgta actgtacccg agcgagcgca
      601 ggccgctgct cccagtaatc agcgggagca ctgtgctttc gggggcaccg gccgggcagg
      661 tgacctgaac cgacccaggg gtgttggaca atatctgcaa gccccggtac ccaccaatcg
      721 agaacttgaa tgggatggca cttccgggcc gcgcaacgtt gacgtacggg ccgttcctga
      781 ccggcgcgaa gaaaccagta aaggtcatcg cactggacac ggagatggag acggtcttcg
      841 tggcggacgt gtagttcggg tcgctcggcg cgaactgcac cgacagagac acagttccgg
      901 ccgaggtgaa cgttgtgccc gctccaggcg tataggtgaa gctgccactc aatgggacac
      961 caccaactcc gctggccgtc gcgttcagct gcgaaggccc gagtggagta ccagtcaaga
     1021 gcgcacctgg cgtccattga aggctaggtg ttgcctgcaa
//
LOCUS       DASRPQ010000747         3120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1974566, whole genome shotgun sequence.
ACCESSION   DASRPQ010000747 DASRPQ010000000
VERSION     DASRPQ010000747.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3120
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1974566"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..761
                     /locus_tag="VFD73_08625"
     CDS             <1..761
                     /locus_tag="VFD73_08625"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HZI74070.1"
                     /translation="ADGEVVELVGTVIDVTDRKQAERALRRARERALAARFTAILEER
                     TRLAREIHDTLLQGFTGVALQLAAVAQRVAGPPETITEFQELIGLAQRTLVDARRAVW
                     DLRASAPVEAEFPATLRNAAEDALRGSDIELTFAVTGMAQGLDHATEVALVRVLQEAI
                     ANTIKHADARTVRVELRYQRRGVRLTVADDGCGFPLASDARSYGGHWGLLGMKERAGQ
                     LYGTLEVESTVGQGTSIVLRLPYRSSAMPTTALS"
     gene            844..1497
                     /locus_tag="VFD73_08630"
     CDS             844..1497
                     /locus_tag="VFD73_08630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HZI74071.1"
                     /translation="MDGAETLETGENAARLLVADDHPIVRRGLISLIAQQPDLEVVAE
                     AANGQQAITLYREHQPDVALMDLRMPVVDGVEAIRTIVREFSGARILALSTYEGDGDI
                     RRALDAGARGYLLKDMLLTDVLGAIRAVRAGERVIPPSVSLRLTSHPEASRLTGRELE
                     VLQLVARGLSNKEAAHAIGRTEETVKIHLKNIYAKLSVADRTEAVTVGLTRGLIHLE"
     gene            complement(1528..2499)
                     /locus_tag="VFD73_08635"
     CDS             complement(1528..2499)
                     /locus_tag="VFD73_08635"
                     /inference="COORDINATES: protein motif:HMM:NF040138.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HZI74072.1"
                     /translation="MRNAGTQSAFEARLGSVRCWIILAAALVTGCGENLMLPAGGAGG
                     PTAIRVVDGDGQTGKIGELLSQPVVVKVTGAGDEPVENATVVFDFVSAGDGGAITPDT
                     TVTDSSGTAQAQVLLGDKVGAQTGEARVVISGSSALQTSFIALATASGPGNHPPHAAF
                     ASHCDNLSCQFSQASTDDDGQVTGWSWQFGDNGTSTEAEPVHVYSAAGSYTVTLTVTD
                     NDGATDATSARIDVTAPSPPPQSNNPPHADFDTHCHDLNCQFSDKSKDDDGRVVSWFW
                     QFGDGFVSVEQNPDHTYRDQGHYDVTLTVTDDDGAMNSKTERADAKD"
     gene            complement(2685..>3120)
                     /locus_tag="VFD73_08640"
     CDS             complement(2685..>3120)
                     /locus_tag="VFD73_08640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74073.1"
                     /translation="LTLMQAAADSSIECAATLDLWNVGDDGQQMQRDRAVDSSETAYN
                     TWVTASGGPIHANGKTLSAEMKRHAETWNPIRLAPALARHSLLVISTNANDSHQKLVA
                     GLRAAGARRVTALQWNTDHSFSDRRIQLARTMVDWLEERCTR"
BASE COUNT          545 a          949 c         1026 g          600 t
ORIGIN      
        1 tggccgacgg cgaagtggtc gagctggtcg gcacggtcat cgacgttacc gaccggaagc
       61 aggccgagcg tgcgcttcgt cgggcgcgag agcgggcgct tgcggcgcgc ttcaccgcga
      121 ttctggagga gcggaccaga ttagcccgcg agatccacga taccctgctg caggggttca
      181 ccggagtggc cctccagctt gcggcagtcg cccagcgggt tgccgggccg ccggagacga
      241 tcacggagtt ccaggagctg attggtctgg cgcaacgaac tttggtggat gcccgtcgag
      301 cggtgtggga tctccgcgcc tcagctccgg tggaagcgga gtttcctgcc actctccgca
      361 acgctgccga agatgccctc agaggcagcg atatcgagct cacgttcgcg gtcaccggca
      421 tggcccaggg actggaccat gctaccgaag tcgcgctggt tcgcgtgctt caggaggcaa
      481 tcgccaacac catcaagcac gccgacgccc gcactgtgcg ggtggagctt cggtatcagc
      541 gacgcggcgt tcgtctcacc gtagcagatg acgggtgcgg cttccccctc gcgtccgacg
      601 ctcgatcgta cggcggccac tggggcctgc tgggcatgaa ggagcgagcc ggccagctgt
      661 atggcacgct ggaggtcgag agcaccgtcg gacagggcac ctcgatcgtg ctacgcttgc
      721 cctaccggtc gagtgcaatg ccgaccactg cgctctcctg acatatctcc tccccgaacg
      781 gggaatggtc ctaccgcaag gtgggacgtt tttttgcatc agcacctccg gagtggagag
      841 ccgatggacg gagcagagac attggagact ggagagaatg cggcccgcct gctggtcgcc
      901 gacgatcatc cgatcgtgcg gagaggtttg atctcgctga tcgctcagca gcccgatctc
      961 gaggtcgttg ctgaagcagc caacgggcag caggcgatca cgttataccg ggagcatcag
     1021 cccgacgtgg cgttgatgga cctgcgcatg ccggtggtcg acggggtcga ggcgatccga
     1081 acgatcgtcc gcgagttttc cggggcgagg atcctcgcac tcagcacgta tgaaggagac
     1141 ggggacattc ggcgagcgct ggatgccggc gcgcggggct acctcctcaa agacatgctg
     1201 ctcaccgatg tccttggcgc catccgcgca gtccgggccg gtgagcgcgt gatacctccg
     1261 tcggtatcgc tacggctcac gagtcatccg gaagcgagcc gtctcaccgg gcgcgagctg
     1321 gaagtcctgc aactggtcgc tcgagggttg agcaacaagg aggcggcgca cgccatcggg
     1381 cgcaccgaag agacggtcaa gattcacctg aagaacatct acgccaagct gagcgtggcc
     1441 gatcggaccg aagctgtcac cgtggggctg actcgcggac tcattcatct ggagtaatcc
     1501 gcagctgtcg tgaagaacgg ttgggcgtca gtctttcgcg tccgcgcgtt cggtcttgct
     1561 gttcatagca ccatcgtcat cggttaccgt gagggtcacg tcgtagtggc cctggtctcg
     1621 ataggtatgg tccggattct gctccacgga gacgaacccg tcgccgaact gccagaacca
     1681 gctcaccacc cgaccatcat catccttgct cttgtcgctg aattggcaat tcaggtcgtg
     1741 acaatgcgtg tcgaagtctg cgtgcggagg attgttggac tggggtggag gtgagggcgc
     1801 ggtgacgtcg atgcgcgcgc tggttgcgtc ggtggcgccg tcgttgtcgg tgactgtgag
     1861 ggtcaccgtg tagctccctg cggccgagta gacgtgcact ggctccgctt cggtcgaggt
     1921 gccattatcg ccgaattgcc aactccagcc ggtcacctgt ccatcatcgt cggtgctggc
     1981 ctgactgaac tggcagctca ggttgtcgca gtgcgaagcg aaggcggcgt gcggcggatg
     2041 gttgcccggg ccgcttgctg tcgcgagagc aatgaacgaa gtctgcaggg cggaggagcc
     2101 gctgatcacc acccgggctt cgccggtctg cgcccccacc ttgtcgccca acagcacctg
     2161 tgcttgcgca gttccgctgc tgtccgtcac cgtggtgtcg ggggtgatcg ctcccccgtc
     2221 tccggcggac acgaagtcga aaacgacggt ggcgttttcc accggctcat cgccggcgcc
     2281 ggtaaccttg accacgacgg gctgactgag caactccccg atctttccgg tttgaccgtc
     2341 tccgtccacg acccggatcg ctgtgggtcc tcccgcgccg ccagcaggaa gcatgagatt
     2401 ttcgccgcaa ccggtgacca gcgcggctgc caggatgatc cagcagcgaa cgctgccgag
     2461 gcgagcttcg aatgcagact gagtaccggc gttacgcacc agttcagctc tcgggttagt
     2521 gctaagggag acggcttgcg gagtcgcggg gactcgccga gcataaaggt aagtacctca
     2581 gggtttcctc gaagtgactt gcggcacaat gacccacact ctgaagtatc aacaggttac
     2641 ggtgcagatc tgagctgatt tcgaggactg gtgaggtgca gatattaccg ggtgcagcgt
     2701 tcttcgagcc aatccaccat ggtgcgggcg agctggatac gccggtcgga aaagctgtga
     2761 tcggtgttcc actgcagtgc ggtgacccga cgcgcccctg cagcgcgcag gccggcaacc
     2821 aacttctgat gtgaatcgtt ggcgttcgtg ctgatgacca gcaacgagtg cctcgccagc
     2881 gctggggcca accggattgg attccaggtc tcggcgtgac gtttcatttc cgcgctcagt
     2941 gttttgccgt tagcgtgaat cgggccaccc gatgcggtga cccaggtgtt gtaggccgtt
     3001 tcgctcgagt cgacagcgcg atcgcgctgc atctgctgac cgtcatctcc cacattccac
     3061 aagtcgagcg tcgccgcgca ttcgatgctc gaatccgctg ccgcctgcat caacgtgagc
//
LOCUS       DASRPQ010000748         1022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2908249, whole genome shotgun sequence.
ACCESSION   DASRPQ010000748 DASRPQ010000000
VERSION     DASRPQ010000748.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2908249"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(339..412)
                     /locus_tag="VFD73_08645"
     tRNA            complement(339..412)
                     /locus_tag="VFD73_08645"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(376..378),aa:Leu,seq:caa)
     gene            556..>1022
                     /locus_tag="VFD73_08650"
     CDS             556..>1022
                     /locus_tag="VFD73_08650"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI74074.1"
                     /translation="MPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAE
                     RHQPDLVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLV
                     KPFTISDLIPAIELAVSRFSEIAELEREVASLSDRLETRKLVERAKGLLQSEQG"
BASE COUNT          197 a          314 c          341 g          170 t
ORIGIN      
        1 gtggaatccg ggagctaatg cttgccagcc gttgggggcg ccgccacctc aggattgcgg
       61 tgccggcaac tggtggaatc cgggagctaa tgcttgccag ccggtagggg cgccgccacc
      121 tcaggactgc ggtgccggca actggtggga cccgggggcc aatatgtgcc gacccgtcgt
      181 gccaccgccg ccaccctaga gccggagggg agttgagcgt ggcctggcgg gcgcgcaaag
      241 aaggccatat gaagcgctgc ggatatcggt cctacgcggt ggcgcacagc atcatatgaa
      301 aacgcggtct acctgcgcta acgcttccac agcatgggtg ccctcggtga gattcgaact
      361 cacactgtac gggttttgaa tccgtttcct ctgccagttg ggatacgagg gcgcggcctc
      421 ctaccttaga ggcagcctcc caccatagag gatcacgaat gcccacctgt ctcaccgccc
      481 ccgaggtcgc tggtctgagg cggtcacgac acaatatcgg tcatgacagg ccccacgacc
      541 cacaccgacg ccgctgtgcc gcgccgggtc ctgatcgctg aagacgaagc gctcatccga
      601 atggatctcg ccgagatgct ccgagaggag ggttacgaga tcgtcgggga ggccggcgac
      661 ggacaggaag ccgtcgaatt ggccgagcgc catcagccgg atctggtgat catggatgtg
      721 aagatgccgc gccgcgacgg catcgacgcg gcctcggaga tagccagcaa gcgcatcgcc
      781 ccgattgtgg tgttgaccgc cttcagccaa cgcgacttgg tggagcgggc gcgggacgcc
      841 ggcgcaatgg cctatctggt gaagccgttc acgatcagcg atctcatccc ggccatcgaa
      901 ttggccgtca gccgtttcag cgaaatcgcc gagcttgaac gcgaagtggc ttcgctgtcc
      961 gatcggctgg agacccgcaa gctggtggag cgcgccaaag gactgctgca gagcgaacag
     1021 gg
//
LOCUS       DASRPQ010000749         1643 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2607210, whole genome shotgun sequence.
ACCESSION   DASRPQ010000749 DASRPQ010000000
VERSION     DASRPQ010000749.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1643
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2607210"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..765
                     /locus_tag="VFD73_08655"
     CDS             <1..765
                     /locus_tag="VFD73_08655"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI74075.1"
                     /translation="RHHTLLYFDQRGSGQSEMPDTLQLTGAAMVEDVEAVRRAFRLDQ
                     LSVFGHSWGGGLAVLYAAQYPNRVKRMVLVGPAAPRWHPYLDQYNANIALRHDTIENA
                     RSAALDSIRKIAPDPHPACHEWFRIFLRGVAASPAAASRIKGDCAGTSTNLRLFGVLN
                     QRIWASLVNTPDSDGYDWRGMATRVMAPTLVVHGDKDPLPLSASEEWVRVLPAARLLV
                     IRDAGHYPHAEQPDQFFPAVEDFLTKHGLQRGDSSK"
     gene            846..>1643
                     /locus_tag="VFD73_08660"
     CDS             846..>1643
                     /locus_tag="VFD73_08660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74076.1"
                     /translation="MPSMRLGWVLVVSASLVTMSSTALGAQRSRAMSFDCRNALPNTA
                     ANRQRADQWVQEKLRAFVPAPDEALRMRALEQGEQVKLAIVGISSTCQQYLAGTMEKD
                     AADLQLSAQEEVISNFLHDLGNDAVILAARAQVSDMENIRHNLTEMGGVARQAALLGE
                     DKLADESWKKMVDVLTTFSKAFVEQTCWNQVFDDELPFALQRQNDLLNSGIDLRPCAQ
                     RRFNAQVSVWTFDSCTIRGVGEWRVLWNMSAPGTTGGRGSGELEADRD"
BASE COUNT          319 a          516 c          522 g          286 t
ORIGIN      
        1 cggcaccaca cattgctcta cttcgaccag cggggcagtg ggcaatctga gatgcccgac
       61 acgctccagc ttacgggggc ggcgatggtc gaggatgtgg aggcggtacg cagggcgttc
      121 cgactcgacc aactctccgt cttcggccac tcatggggcg gaggcctggc ggtgctgtac
      181 gcggcgcagt acccaaaccg ggtaaagagg atggttctcg taggccctgc agccccgcgc
      241 tggcatccct acttagacca gtacaacgcc aacatcgccc tccgccacga caccattgag
      301 aacgcccgct cggccgccct ggacagcatt cggaagatcg ccccggaccc gcacccggct
      361 tgccacgaat ggttccgaat tttccttcga ggcgttgcgg ctagccccgc ggccgcgagc
      421 cgcatcaaag gcgattgcgc ggggacgtcc accaacctcc gactctttgg tgtactgaac
      481 caacggatct gggcgtcgct cgtgaacacc cccgatagtg acggctatga ctggcgagga
      541 atggccacac gggtgatggc tcccaccttg gtggtgcacg gcgacaagga cccgctgccg
      601 ctcagcgcaa gcgaggagtg ggtcagggtg cttccggcgg cccggcttct ggtgatccgc
      661 gatgccggac actatccgca cgccgagcaa cccgaccagt tctttcctgc ggtcgaggac
      721 ttcctcacta aacacggact gcagcgaggg gatagctcta agtagttgct gtagcactgc
      781 cgggcgatat cttctcccta aaccagatca ttcgacgttc cgtgacctcc cgcgggtgag
      841 ggaacatgcc gagcatgcga cttggctggg ttctcgtggt gtcggcctcc ctcgtcacca
      901 tgagcagcac agcgttggga gcccagcgat cccgggcgat gtcgttcgac tgccggaacg
      961 cattgcccaa caccgccgcc aatcgccaac gtgccgacca gtgggttcag gaaaagttgc
     1021 gagcgttcgt gcctgctccg gacgaagcac tccggatgcg agcgctggag caaggcgaac
     1081 aggtgaagct cgcgatcgtg ggcatcagct ccacctgcca gcagtatctc gccggtacca
     1141 tggaaaagga tgccgccgat ctccagctca gtgctcagga agaggtgata agcaacttcc
     1201 tccacgatct cggcaacgac gccgtgatcc ttgccgccag agcgcaggtc tcggatatgg
     1261 aaaacatccg ccacaacttg actgagatgg gcggcgttgc gcggcaggct gcgctcctgg
     1321 gagaggataa gctggccgac gaaagctgga agaagatggt ggatgtgctc accacgttca
     1381 gcaaggcgtt tgtcgagcag acctgctgga accaggtgtt cgatgacgag cttcccttcg
     1441 ccctgcagcg gcagaacgac ctgctgaaca gcggcatcga tctccggccc tgcgcccagc
     1501 gccgcttcaa cgctcaggtg agcgtttgga cgttcgacag ctgcaccatt cgcggggtgg
     1561 gggaatggcg ggtgctctgg aacatgagtg cgcccgggac gacgggcggc cgcggctcgg
     1621 gcgagctcga agccgataga gat
//
LOCUS       DASRPQ010000750         1006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1974743, whole genome shotgun sequence.
ACCESSION   DASRPQ010000750 DASRPQ010000000
VERSION     DASRPQ010000750.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1974743"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..501
                     /locus_tag="VFD73_08665"
     CDS             <1..501
                     /locus_tag="VFD73_08665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74077.1"
                     /translation="RGFELAYQQFFDFLPSVLHGLGFQGNLTLVDSNGGRNSAVNVLD
                     VNQTTGQDDRTLPLEGMSRWSYNANVMYETPLISARLAWNWRERYLLTTSAANINAPV
                     WSENYGQLDGEIFFNITKNIKVGAQATNLLNRRTFLDVGGAVLAPRYSWTDTDRRYAI
                     AVRGHF"
     gene            511..>1006
                     /locus_tag="VFD73_08670"
     CDS             511..>1006
                     /locus_tag="VFD73_08670"
                     /inference="COORDINATES: protein motif:HMM:NF016693.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan 7-halogenase"
                     /protein_id="HZI74078.1"
                     /translation="MDNAIRKIVVVGGGTAGWMAAAVLARFLKPQRVSIQLIESEEIG
                     IVGVGEATVPVIQALNGLLGIREADFLRHTYGTFKLGIEFRDWARLGNTHFHFFGDFG
                     APIEGVAPHHHWLKLHQLGDGTALADYSFPYVAGKLGRFAPPSSEPRSEAASYKYAYH
                     FDAGL"
BASE COUNT          180 a          297 c          321 g          208 t
ORIGIN      
        1 cgcggattcg agctggccta tcagcagttc ttcgacttcc tgccgagcgt gctgcacggg
       61 ctgggcttcc agggcaattt gaccctggtg gacagcaatg gtggtcgcaa cagcgcggtc
      121 aatgtcctgg atgtgaatca gacaaccggc caggacgatc ggacgctgcc tttggagggc
      181 atgtcccggt ggagctataa tgccaacgtg atgtatgaga cgcccctcat cagcgcgcgg
      241 ctggcctgga actggcgtga gcgttatctg ctgacgacct cagcggccaa catcaacgcg
      301 cccgtctggt cggagaacta cggacagctc gatggggaga tctttttcaa catcacgaag
      361 aacatcaagg tgggagcgca ggcgaccaat ctcctcaacc gacgtacgtt cctcgacgtg
      421 ggtggcgcag tgcttgcgcc gcggtacagc tggaccgata cggaccggag atacgcgatc
      481 gccgtgcgcg gacatttctg acccgccggc gtggacaacg ccatccgcaa gatcgtggtc
      541 gttgggggcg gcacagccgg ttggatggct gctgccgtcc tggcgcggtt cctgaagccg
      601 cagcgggtat cgatccaact gatcgagtcg gaggagatcg gtattgtcgg ggtcggtgag
      661 gccaccgtcc ccgtgatcca ggccttgaac ggcctcctgg gcatccggga ggccgatttc
      721 ctgcgccata cctacgggac cttcaagctg ggtatcgagt tccgggactg ggcgcgcctg
      781 ggcaataccc acttccattt cttcggcgat ttcggagcgc cgatcgaagg tgttgcgcct
      841 catcaccatt ggctcaagtt gcatcagctg ggtgacggga ctgcgctcgc cgattactcg
      901 ttcccctatg tcgcggggaa gctcggcagg tttgcgccac cttcaagtga gcctcgctct
      961 gaggctgcgt cctacaagta tgcctaccac ttcgatgctg gcttgt
//
LOCUS       DASRPQ010000751         1100 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1654713, whole genome shotgun sequence.
ACCESSION   DASRPQ010000751 DASRPQ010000000
VERSION     DASRPQ010000751.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1654713"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..241)
                     /locus_tag="VFD73_08675"
     CDS             complement(<1..241)
                     /locus_tag="VFD73_08675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74079.1"
                     /translation="MAGVDLADVAADLNQAGHGENPRLTVIVPTRDERHGIELLMERL
                     GPAVAPLDAELIFVDDSDDGTPDVLAEQAAACPVPI"
BASE COUNT          206 a          335 c          351 g          208 t
ORIGIN      
        1 ggatcggaac cggacaggcg gcagcctgct cggccagcac gtccggcgtc ccgtcgtcgc
       61 tgtcgtcgac gaagatgagc tcggcatcca gcggcgcgac ggccggaccg agccgctcca
      121 tcagcagctc gatgccgtgc ctctcgtcgc gggtggggac gataaccgtc agcctcggat
      181 tctcgccgtg gccggcctgg ttgagatcgg cggccacatc agctaggtcg acgccagcca
      241 tccgcacgcg ttccgcaatg cctggccagg tatcgctgga cggtgtggta actgcctgct
      301 cgggcaggac agggtcaatc ggcatataaa tggcccccct caacggcgca acgcagcatt
      361 aaatggccgt cggatacggt gtaagcgtct gcgggcagcg tcggaaagcc agcggtactc
      421 agtacgcatc aggatgagca gcgcagaagt acagagcgac caggacgtca gttaaccggc
      481 cccggtgctg ccgatggcaa aatccgtcac gatataacca ggcccgagca cgatcaaatc
      541 gcgcgcaagc tcacctcccc cggaacgggc ccttggctac tgccgctaat gaattttccg
      601 ggggctcgag ccacttttcc cgagctggcc gcaccggtcg caaaggtgat caagaacagt
      661 tgatcatttg cggtcatgct tgaaacagga cattaacccg aacatcttga tccatgcaag
      721 acgcctggcg ttcatcttct gtttaaattt gggtaacccc gctgtggcct cgcgctatgg
      781 ccttctgcgg aagagtcagg tatttctggg acggcaggtg accaggcagg cttctggtgc
      841 cgttgatccg actggagtgc agtcagaccg gatcgccgcg ccgcctgagc ccagtccggc
      901 agcggttcag gagccgtagg tggcggcagg ctcctggtgc ttgcggcttt catggtctac
      961 ctatgtagac gggcggactc tacctatcta gagttggtgg ggtgacgtcg cgttcggagt
     1021 tctctgcgca gaccttgtcc gtgctggcgg cgctgagcca gcagccgtcg gactggcagc
     1081 acggctacgc gctggccaag
//
LOCUS       DASRPQ010000752         1552 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3229141, whole genome shotgun sequence.
ACCESSION   DASRPQ010000752 DASRPQ010000000
VERSION     DASRPQ010000752.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3229141"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            230..306
                     /locus_tag="VFD73_08680"
     tRNA            230..306
                     /locus_tag="VFD73_08680"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:264..266,aa:Pro,seq:cgg)
     gene            628..939
                     /locus_tag="VFD73_08685"
     CDS             628..939
                     /locus_tag="VFD73_08685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74080.1"
                     /translation="MLVPTGYYPHHNLYYVLSDGWDLEVLGGLLLSEVVERQIAAYCV
                     KIQGGTLRFQAQYLRRVRCPRPDAIAAGVQALAQAFRARDHVAATNAAFWVYGMSSLP
                     I"
     gene            1040..>1552
                     /locus_tag="VFD73_08690"
     CDS             1040..>1552
                     /locus_tag="VFD73_08690"
                     /inference="COORDINATES: protein motif:HMM:NF016442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaeR7I family type II restriction endonuclease"
                     /protein_id="HZI74081.1"
                     /translation="MGEWISAKLEQAQRSERTGRAQGGTRSQVTGGKHLRGVNQLVED
                     EIKSVGATDLELKYDRGATLAGWYRNSKSWDLLVLQHGKPILAVEYKSMSGSEGRNLN
                     NRADEVFGIAEDARQAEAHGILPRNLRRAYIFLMEITPTARVNRNAGRPFGRPDPIFH
                     QASYLDRMAVM"
BASE COUNT          308 a          471 c          481 g          292 t
ORIGIN      
        1 ccgccgatgg ccggtcctgg ctgcacatct ccgccgtact cggcacgtca ccgtgggccc
       61 ccgcccgctt cgcctgccgc cccgaggcca gcctgcttac cctggtgccc cgcgacgccg
      121 gctagattcc cgggcccggg cctggcactt gcgcagccgt gcacgagcag gccctggttt
      181 ccgctagact aacggaggtt cgcgcggaac cggtgaggtc tcgcgcgggc ggggtgtagc
      241 gcagcttggc agcgcgcttc gttcgggacg aagaggccgg gagttcaaat ctccccaccc
      301 cgaccagctc agaggccatg acacgacagc cggtgtcatg gcctttagtc actgaataac
      361 taagcatctg gagccgtctc ccctggactc gggaagagcc ggtccatgac ctcagcgccg
      421 tcgatgatca ccgggcggat ctgcttacgg tagacagtct cggtagtggt ggtcccgctg
      481 tggccgacca gccgtgatat ctgctcgacg ggaacaccag catccgaaag tagcgaccac
      541 tagtaccgca ccatcgataa cgtgagacac ggactcttaa gccagcgcat accggtgatg
      601 gtggatctca cagcacaggc gtagcctgtg ctggtcccga ccggttacta tccgcatcac
      661 aacctgtact acgttctctc cgatggctgg gaccttgaag tccttggcgg cctgttgctg
      721 tccgaggtgg tagagcggca aatagctgct tactgcgtga agatacaggg cggcactctg
      781 cggtttcagg ctcagtacct gcgccgggta agatgccccc gcccagacgc gatcgccgct
      841 ggtgtgcagg ctctcgccca agcattcaga gcccgggacc atgttgccgc gacaaatgcg
      901 gcgttctggg tgtatgggat gtcttctttg ccgatctgat ccctggccac gggtgcactc
      961 cgatacgatc acgtcctctc gtaaatcgga tcaacggagc gacatgacac cggacgagca
     1021 tgcccggatt accagggcca tgggcgagtg gatcagcgcg aaactagaac aggcacagag
     1081 gtcagagcgt accgggaggg cgcaaggagg cactcggtcc caggtcacag ggggtaagca
     1141 tctgcggggg gtcaaccagc tggtggagga cgagatcaag agcgttggag ccactgatct
     1201 tgagctgaaa tacgatcgcg gcgctacgct cgcaggctgg taccgaaact ccaaatcctg
     1261 ggatctgctc gtactgcagc atggaaagcc aattcttgcg gtcgagtata agtcaatgtc
     1321 ggggagcgag ggaaggaacc tgaacaaccg agccgacgag gtattcggta ttgcagagga
     1381 tgcgcgccag gccgaggctc atggaatctt gcctcgtaac ttgcgccgcg cctatatctt
     1441 cctaatggag atcacaccga ctgcccgggt taaccgcaat gctggacggc cgttcggcag
     1501 acctgacccg atcttccatc aggcatccta tcttgatcgt atggcggtca tg
//
LOCUS       DASRPQ010000753         1782 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4479652, whole genome shotgun sequence.
ACCESSION   DASRPQ010000753 DASRPQ010000000
VERSION     DASRPQ010000753.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4479652"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(248..>1782)
                     /locus_tag="VFD73_08695"
     CDS             complement(248..>1782)
                     /locus_tag="VFD73_08695"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HZI74082.1"
                     /translation="GGYENEDGWREATGADNLNGFLNLGRRGPAHGISLQAFGAESRA
                     ETAGSLPESIFSTSPSTNFTIGDFDDLNQLQASMNGYTTLGSSRGSFTAYVRRSHSER
                     FNVNQAPDNNVRSFTNNRTLGGNLDWRWTRPRSNGSFSLRLGADGAANRVHIELLEET
                     PVVPTTSTLTTDVHSPSYDVAGYALADLRLDQVTFSGGLRYDYIHIPFSNALDPSSDT
                     TNTFTRLSPRGGISWEVGPGASAYMSIGQSFRAPAILELACADETAACPLPFALGDDP
                     PLDPVVGTTFEVGGQLVRGPAIINASVYRTNVKDDISFIQSENAIFEGFFSNIGSTRR
                     EGFELSVQLVPSERLSLYANYAYTRATFRDPAEIFSVRADSAFVGAPLAGPNDVSIGD
                     QLPLVPNHQLKFGGMVALPVGFQFGADARYTGRQWLRGDEANETTPLSGYFEGNLRAG
                     FSRARWEISAVISNVLDSHRPIFGTFNENRQTGALERFLTPLNARSIKIIVRRAFGAA
                     SD"
BASE COUNT          342 a          526 c          574 g          340 t
ORIGIN      
        1 tgtgtcacga accggcactg caatggctgt agcctgcata agacctccgg cttccttgtt
       61 tgcccctgaa aaacccggca gacaccatgg cccgatcacc aaagtgggtc ggtgagcagg
      121 gtcacgactc ggcaaccctg ccatcgctgc gccgagccat ccatctaatc gagccaggca
      181 gatgtagctc gatgagactg acggctaggc tatgccatgg ccctgtcggc gtcaagctgg
      241 ttcgaagcta gtccgaggcg gcgccgaagg cgcgacgaac gatgatcttg atgctgcggg
      301 cgttgagggg ggtgaggaac cgctctagtg ctccggtctg tcgattttcg ttgaaggtgc
      361 cgaagatcgg ccggtgagaa tcgagaacgt tggagatcac ggcagagatt tcccatcgtg
      421 cacgactgaa acctgcacgc aggttcccct cgaagtatcc actcaacggg gtcgtctcgt
      481 tggcttcgtc tccccggagc cattggcggc ccgtgtatct ggcatcagcc ccgaactgaa
      541 atccgaccgg aagcgcaacc atgccaccaa acttgagctg atgattcggc accagaggca
      601 gctggtctcc gatactcaca tcgttcgggc cagcgagggg agcaccaacg aaggcgctat
      661 cagctcggac actgaagatc tcggccggat cgcggaaggt ggctcgggta tatgcgtagt
      721 tcgcatagag cgacaggcgt tcgcttggca ccagctgcac cgaaagctcg aacccctctc
      781 ggcgagtgct gccgatgttg gagaagaaac cctcgaagat ggcgttctcc gactggatga
      841 acgaaatgtc gtctttgacg ttggtccgat agaccgaggc gttgatgatg gcggggccgc
      901 ggaccagttg cccgcccacc tcgaaggtcg tgccgaccac gggatcgagc ggcggatcgt
      961 cgcccagcgc gaacggcagc gggcaggcag cagtttcgtc ggcacaggcc agctccagaa
     1021 tggccggtgc tcgaaaactc tgtccgatcg acatgtaggc cgaagcacct ggcccaacct
     1081 cccagctgat gccgccccgc ggactgaggc gggtgaacgt gttcgtcgtg tcagagctgg
     1141 gatcgagcgc gttactgaag ggaatgtgga tgtaatcgta ccggaggccg cccgaaaagg
     1201 tgacctggtc gagccgcagg tcggccagcg cgtagcccgc cacatcatag ctgggactgt
     1261 gcacgtcggt ggtgagcgtg ctggtggttg gaacgaccgg tgtttcctcc aggagctcga
     1321 tgtggactcg gtttgccgcc ccgtcggctc cgagacgcag tgaaaagctg ccgttcgagc
     1381 gaggccgcgt ccaacgccag tccaagttgc cacccagtgt gcgattgttg gtgaacgagc
     1441 gcacgttgtt gtcgggggcc tggttcacat tgaagcgctc tgagtggctg cgcctgacgt
     1501 aggcggtaaa gctgccgcgg ctacttccca gcgtggtata tccgttcatc gaagcctgta
     1561 gctggttcag gtcatcgaag tcgccgatgg tgaagttcgt gctgggggac gtcgaaaaga
     1621 tgctttccgg cagtgacccc gcggtctccg ccctggactc cgcgccgaac gcctgaaggc
     1681 tgatcccgtg ggctgggccg cgacgcccga gattgaggaa gccgttcaga ttgtccgcac
     1741 cagttgcctc ccgccagcca tcctcgttct cgtagcctcc cg
//
LOCUS       DASRPQ010000754         1633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2908844, whole genome shotgun sequence.
ACCESSION   DASRPQ010000754 DASRPQ010000000
VERSION     DASRPQ010000754.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1633
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2908844"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /locus_tag="VFD73_08700"
     CDS             <1..414
                     /locus_tag="VFD73_08700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74083.1"
                     /translation="RIKLHPLLGYGYGGFWLQWDPPSGDIWRISMRTGGWLPPNGHNG
                     FIDLLAELGFAGLGAFLISFASNVGRALRLVRESVSAVDLFPLLFLYLLLLSNLTESV
                     LVTHNSLLWLLYVAFTIQLGLGAGGPRSHPIAART"
     gene            411..>1633
                     /locus_tag="VFD73_08705"
     CDS             411..>1633
                     /locus_tag="VFD73_08705"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HZI74084.1"
                     /translation="MSAALPAGPQSPPSSLQSTGEPLRILLSAYACEPYKGSEPGVGW
                     NWALQAARYHQVWVLTRANNRAAIESWLQRTPVSGLQFVYYDLPHWARFWKRGAVGIR
                     AYYVLWQAGAYWVARRVHRSVRFHLTHHVTFNTLEVPGFLWLLPAPFVWGPVGGGQEP
                     APALRSYFGDRWYRERLRVIRKRLARFNPILRLAARHAKAVLVANADTAERLRGLRAE
                     GSVRELETAIDIPSEASAGGGSDRFTVLWAGALIGRKGPALALDALAALKRSGVDFRA
                     HFIGDGPLREALEERIRLLGLGSEVVLHGHVSYGDIHRYYRESDAFLFTSLHDTSGNV
                     LLEAMAHALPVVTLDHHGAREIVSSETGIKVAVRDQAQVVEDLASALRRLAVDPALRQ
                     SMGKAGRRRVAHEYS"
BASE COUNT          243 a          538 c          542 g          310 t
ORIGIN      
        1 agaatcaagc tgcacccgct gctgggctac ggctatggag ggttctggct acagtgggac
       61 ccgccctcgg gcgacatctg gcggatatcc atgaggaccg gtgggtggct cccacccaac
      121 ggtcacaacg gcttcatcga cctgttggct gagctcggct ttgccgggct gggagcgttt
      181 ctcatcagtt tcgcctccaa cgtgggccgg gcgttgcggc tggtgcgcga gagcgtctcg
      241 gccgtagacc tcttcccgct gctctttctc tacctgctcc tgctgtcgaa tctcaccgaa
      301 tccgtgctgg tgacccacaa ctcgctgctc tggttgctgt atgtcgcctt tacgatacag
      361 ctcgggctcg gggcgggcgg gccccggtcg caccccatag cggccaggac atgagcgccg
      421 cgctgcccgc aggtccccag agccctccct catccctcca gagcacgggt gagccgctcc
      481 ggatcctgct gtccgcctac gcctgtgagc cgtacaaagg gtcggagccg ggggtcggat
      541 ggaactgggc cctgcaagcc gccagatatc accaggtctg ggtgctcacg cgcgcaaaca
      601 atcgcgccgc gatcgagtcc tggctgcagc gcacgcctgt gtccggcctc caattcgtgt
      661 actacgacct ccctcattgg gctcgattct ggaaacgggg tgcggtcggc atccgcgcct
      721 actacgtgct ctggcaggct ggcgcgtact gggtagcccg acgtgtgcat cgatcggtcc
      781 ggtttcacct gacgcatcat gtcacgttca acaccttgga ggtgcccggg ttcctctggc
      841 tcctgccggc gccgttcgtc tggggaccag tgggcggggg tcaggagccc gcacccgccc
      901 ttcgatcgta cttcggcgac cgctggtacc gggaacggct acgggtgatt cgcaaacgcc
      961 tggcccggtt caatcccatt ctgcgcctgg cggcccgtca cgccaaggcc gtgctggttg
     1021 cgaacgcgga tacggctgaa cgccttcgcg gccttcgcgc cgaagggtcg gtccgggagc
     1081 tcgagaccgc gatcgatata ccgtccgaag catcggccgg gggcgggtcc gaccggttca
     1141 ccgtgctgtg ggcgggcgct ttgatcgggc ggaaaggacc ggcgctggcc ctggatgcgc
     1201 tggccgcgct caagcgaagc ggtgtggatt ttcgagccca cttcatcggg gatggcccat
     1261 tgcgcgaggc actcgaggaa cggattcgcc tcctcgggct ggggtctgag gtggtcctgc
     1321 atgggcacgt gtcgtatggc gacatccacc gctactaccg agagagcgac gccttcctgt
     1381 tcaccagttt gcatgacacg tccggcaacg ttctcctcga ggcgatggct catgccctcc
     1441 cggtagtgac gctcgaccat cacggggcgc gcgagatcgt ttccagcgag accgggatca
     1501 aggtagctgt ccgcgaccag gcgcaggtcg tcgaggacct cgcatccgcg ctgaggcggt
     1561 tggccgtgga cccggcgctt cgccaaagca tgggcaaggc gggccgccgg cgcgtagccc
     1621 acgagtacag ctg
//
LOCUS       DASRPQ010000755         1008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1027844, whole genome shotgun sequence.
ACCESSION   DASRPQ010000755 DASRPQ010000000
VERSION     DASRPQ010000755.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1027844"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /locus_tag="VFD73_08710"
     CDS             complement(<1..392)
                     /locus_tag="VFD73_08710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74085.1"
                     /translation="MDEPEGGGLDGGRTRPGCGLAPTRLGGAEGDRLDRAEAAPAPSG
                     RGHAGGAGGVQKKLEQAVAEARAQHPDKPIEVWATDEHRIGLKPIIRRVWAPKGQRPI
                     ALGHHRYKWLYVTAFVQPISGEVFWYVS"
     gene            complement(859..>1008)
                     /locus_tag="VFD73_08715"
     CDS             complement(859..>1008)
                     /locus_tag="VFD73_08715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZI74086.1"
                     /translation="TLWYRARIKRTGGRLGKTMIVALARKLLVALWKYATAGVLMEGA
                     ILKQA"
BASE COUNT          163 a          336 c          322 g          187 t
ORIGIN      
        1 ttcgatacat accagaacac ctcgccggag atcggctgca cgaaggcggt cacgtacaac
       61 cacttgtacc ggtggtggcc aagcgcgatc ggccgctgac ctttgggcgc ccacacccgc
      121 cggatgatcg gcttcagccc aatgcggtgc tcatccgtgg cccagacttc gatcggcttg
      181 tccgggtgct gggctctcgc ctcagcgacg gcctgctcga gctttttttg aacgcctccc
      241 gctcctccgg cgtggccgcg gccggatggc gcgggcgcgg cttctgcacg gtccagccga
      301 tcgccttcag cgcctcccag ccgcgttggg gcaagaccgc agccaggccg agttcgcccg
      361 ccatccaggc cgccaccttc gggctcgtcc acaagccgcc gtcagggggt ggctcaagca
      421 gacgatcctt gagcttctcc agcaggtcgg gcctcagaac ggaggggctt gtcccgttcc
      481 ggcgtcgcag atcgcccaga gcctgcggac cctgggcgtt gtagcgggcc agcagacgtt
      541 cacatggggg cgatcctgtc aatctagcgt gatggggtca tggagcgctc cctgagctgg
      601 agggctattg cttgatttcg catccgaggt ccgagcccgt tgcatgacct ggcccggctc
      661 cggtgccagg tcaaactcac attcggtcgc tgcgcggagc agctgcacca acatcccgct
      721 tgcggcgggt gagggctcag gaggacgaga ccattcttca agtcggctta tccaagccat
      781 gggctgatgc ggttcgtcca cctggatccg ccagggctga tcaggccccg ggagattggg
      841 ggcaaggcgg cattttgatc aggcttgctt aaggatggct ccctccatca gaacgccagc
      901 tgtcgcatac ttccagagcg caaccagcag cttgcgcgcc agagcaacga tcatcgtctt
      961 gccgagacgg ccgcccgtgc gcttgatccg cgcgcggtac cacagggt
//
LOCUS       DASRPQ010000756         1583 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2909011, whole genome shotgun sequence.
ACCESSION   DASRPQ010000756 DASRPQ010000000
VERSION     DASRPQ010000756.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2909011"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VFD73_08720"
     CDS             complement(<1..183)
                     /locus_tag="VFD73_08720"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HZI74087.1"
                     /translation="MMTCLSKNEPLSRNDKSPELLAGYLAKRLDPVQMAEMDRHFAEC
                     AECRGFLTVWERLDDFA"
     gene            complement(205..783)
                     /locus_tag="VFD73_08725"
     CDS             complement(205..783)
                     /locus_tag="VFD73_08725"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HZI74088.1"
                     /translation="MEAVAALERDAQLMLRVREGDDTSFALLLERHRTPVVHFLYRMV
                     QNQAVSEELAQEVFLRVYRSRTTYEPTAKFTTWLFRIATHVALNSIRDRKNEKGHESL
                     DEETLDGVGRQVADRQQTVEQEMVREAKLREVRQAIETLPAKQRAAVLMHKYEGLDYA
                     QIAGVLSCSESAVKSLLFRAYESLRGRLAHMA"
     gene            complement(876..>1583)
                     /locus_tag="VFD73_08730"
     CDS             complement(876..>1583)
                     /locus_tag="VFD73_08730"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: protein motif:HMM:NF000942.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HZI74089.1"
                     /translation="SMILVSATKGLEQGSLLRMSQVIEQVVGTKFAPRATVLSGPTFA
                     REVAAGNPTAVVVASSDLEAARCVQQAFSGHTFRLYTNADPVGVEVGAALKNVIAIGA
                     GICEGFGLGHNPTAALITRGLAEITRLAVAMGGQAKTLSGLAGLGDLVLTCSGDLSRN
                     RQVGKELGLGKPLAEILGSMRMVAEGVETCASAVALGEKFVVDLPIIQQMHAVMSGRK
                     SPREAVRELMDRTLKGE"
BASE COUNT          282 a          550 c          439 g          312 t
ORIGIN      
        1 ggcaaaatcg tccagccgct cccagacagt caggaatccc cggcactccg cgcactccgc
       61 gaagtggcgg tccatctcgg ccatctgaac cgggtcgagc ctctttgcca ggtaaccggc
      121 cagaagctcc gggctcttgt cgttcctact taggggttca ttcttactca ggcacgtcat
      181 catcttccct caaaaagaac agctttatgc catgtgagcc aaccgcccgc gcagcgattc
      241 gtacgcccgg aacagcaacg acttgaccgc ggattccgaa cagcttaaca ctcccgcgat
      301 ctgcgcgtaa tccaggcctt cgtacttgtg catcagcacg gccgcgcgct gcttggcggg
      361 cagagtttcg atcgcctgcc tcacctctcg cagcttggct tcacgaacca tctcttgctc
      421 gactgtctgc tgccggtcgg ctacctgccg gcccacgccg tcgagcgttt cttcgtccag
      481 gctctcgtgg cctttttcat tttttctgtc gcgtatcgag ttcaacgcca catgcgtggc
      541 gatgcggaac aaccacgttg taaacttcgc tgtcggctca tacgtcgtcc ggctccggta
      601 cacccgcaga aacacttcct gcgccagctc ctccgataca gcctgattct ggaccatccg
      661 gtacaggaaa tggaccacgg gcgtccggtg ccgttcgagc aacaaggcga agctggtatc
      721 gtccccttcg cggacccgca gcatcaactg ggcgtctcgt tccagggcgg ctacagcctc
      781 catatcctgg ttaacccgag cctcgggaga aggttgcgca ggttcgaaca cggtgtctga
      841 actttccgac gccgcccgcc gggagcgtgt ttctgctatt cgcccttaag ggtccggtcc
      901 atcagctccc gaaccgcctc acggggcgat ttgcggccgc tcatcacggc gtgcatctgt
      961 tgaataatcg gcagatccac gacgaacttc tctccgagcg ccaccgccga ggcgcaggtt
     1021 tccaccccct cggctaccat gcgcatggac ccgaggattt ccgccagtgg ctttccgagg
     1081 cccaactcct tacctacctg acgattgcgg gataaatctc cactacaggt taaaaccaga
     1141 tccccgagcc cggctaggcc ggacagcgtc ttggcctgcc cgcccatggc gaccgcgagg
     1201 cgggtgatct cggccagccc gcgcgtgatg agcgccgcgg tgggattgtg gcccagtccg
     1261 aagccctcgc agatcccggc gccgatggcg atcacgttct tgagagcggc tcccacctcg
     1321 acccccacgg ggtcggcatt ggtgtacagc cggaatgtgt gcccggagaa cgcctgctgg
     1381 acgcatcggg ccgcctccag atccgaagag gcgacaacaa cggcggtcgg gttcccagcc
     1441 gcaacctcgc gcgcaaaagt cggcccggag agcaccgtcg cccttggggc gaacttcgtg
     1501 ccgaccacct gttcgatcac ctgggacatc cgcagcaggc ttccctgctc cagccccttg
     1561 gtggcgctca ccaggatcat gga
//
LOCUS       DASRPQ010000757         1017 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1655553, whole genome shotgun sequence.
ACCESSION   DASRPQ010000757 DASRPQ010000000
VERSION     DASRPQ010000757.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1655553"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            664..>1017
                     /locus_tag="VFD73_08735"
     CDS             664..>1017
                     /locus_tag="VFD73_08735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74090.1"
                     /translation="MAETSTDQEMPGPVYALFQRRVAGDDALLKLAGLRFAQLGLAAE
                     VYADTPEELEHVLRFVPAHPYLPVVHLNRGVNVLDEGGRAVVGEFADRFAGRLAGVVV
                     HDSREMGAQADRLVTV"
BASE COUNT          157 a          284 c          372 g          204 t
ORIGIN      
        1 atcggttcga ttccgatagg cggctcaggt caggggataa ttgcgcttgt atgttcaatc
       61 gccgtggacc gacctagccg gtccacgaag gccaccaatg acttcgcctt ggactggcag
      121 aaggtcacgc agggtgatgc cgaaaccggc ggtgctgcct gggtcctgtc accacactcc
      181 gggggtgtag gtcgtactgg tgtcccaggc cgtcatcgtc ggcatggacg tgtattggat
      241 ccgtcggcat cgcgagccgt gatcgtggcc gttcggtgtc gccgatcggc actgcggcgg
      301 cccctgccag cgcgggctat gccgcacgcg tgcggtattc acctggtgat aggtactgcc
      361 agagtccaaa ggcaggctct acttgtgtca cgcctcaccg agctctgccg ggtggccgaa
      421 acgcacgtct ctgctgtcat aactggctct tcggcaggtc tggccgggac gcgaacctcg
      481 ccgtttgcgg tgcagaatgg cctgcacggg ctggggcaaa tgctgggaca agccaaggtt
      541 ccgggcttag ctcgacagct ggcgaagcgc tgcggcgcgg tgaccgggtc ggcagctacg
      601 atgccctggg ggtgaaatca tggatcgtgc tggctaggtg gtgaaagtcc ggggggaatc
      661 agcgtggccg aaaccagtac ggaccaggag atgcccggcc ctgtttatgc cctgtttcag
      721 cggcgcgtcg cgggggatga tgcgctgctg aagctcgctg ggcttcgctt cgcgcagttg
      781 ggcctggcgg cggaggtgta tgccgatacg ccagaagagc tggagcatgt tttgcggttc
      841 gtgcctgccc atccgtatct gccggtggtt cacctgaacc gtggcgtcaa tgtgttggat
      901 gaggggggcc gcgcggtggt tggggaattc gccgaccggt tcgcgggccg gctcgcgggg
      961 gtggtcgtcc acgacagccg tgagatgggg gcacaggcgg accgcctggt tacggtg
//
LOCUS       DASRPQ010000758         1545 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1028056, whole genome shotgun sequence.
ACCESSION   DASRPQ010000758 DASRPQ010000000
VERSION     DASRPQ010000758.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1028056"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..489)
                     /gene="smpB"
                     /locus_tag="VFD73_08740"
     CDS             complement(1..489)
                     /gene="smpB"
                     /locus_tag="VFD73_08740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HZI74091.1"
                     /translation="MSPDTTPHSAERRHSVARNPKATHDYHILETWETGIVLSGTEVK
                     SLRSGKASIREAYARVRNGEVFLEGMNITPYEQGNRYNHDPVRTRKLLLHKREIQKLI
                     GAVEQRGLTLVPLELYFKNGRAKVALALGKGKKQHDKRETLKRKIQEREVARALSVRG
                     RR"
     gene            584..667
                     /locus_tag="VFD73_08745"
     tRNA            584..667
                     /locus_tag="VFD73_08745"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:618..620,aa:Leu,seq:cag)
     gene            complement(797..>1545)
                     /locus_tag="VFD73_08750"
     CDS             complement(797..>1545)
                     /locus_tag="VFD73_08750"
                     /inference="COORDINATES: protein motif:HMM:NF013094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HZI74092.1"
                     /translation="FPTRYLVNDACVLLGKPNVYGSIFRFEGQASLFYAAEGPCYRCL
                     YSEPPPPGLVPSCAEGGVLGVLPGIIGSIQALESIKWIIGAGDSLLGRLLLFDALKLR
                     FRELQLRKDPACPICGPNRTIHELIDYEAFCGIGAETPYTGPEITPEELREEMLEKGS
                     NLVLIDVREPHEWDIAHIEGARLIPLGELPERLGELDGHSEIVTQCHHGARSMKALAV
                     LKGAGFSRVRSLAGGIDAWADRIEVGMPRY"
BASE COUNT          277 a          498 c          456 g          314 t
ORIGIN      
        1 tcaccggcga cctcggacgg acagagcgcg ggcgacctcc cgctcctgga tcttccgctt
       61 cagggtctca cgcttgtcgt gttgtttctt ccccttcccg agcgccagtg ccaccttggc
      121 ccggccgttc ttgaagtaga gttccagcgg cacaagagtc agaccccgtt gttccaccgc
      181 tccgatcaac ttctggatct cgcgtttgtg gagcagcagc ttccgggtcc gtaccgggtc
      241 atggttgtac cgattgccct gttcgtatgg ggtgatgttc atgccttcca ggaacacctc
      301 accattgcgc acccgggcgt atgcttcccg aatggaagcc tttccgctgc gaagcgactt
      361 gacctcggtt ccgctgagga cgataccggt ttcccacgtt tccagaatgt ggtagtcgtg
      421 ggtcgccttg ggattgcggg cgaccgagtg gcgccgctcg gcggaatgag gggtggtatc
      481 ggggctcact tagggaatcc taagcaaagg atagaccaac acttcggacg ggtcaacgcc
      541 tcgagttgac cgggttctcc aagaccacta gctttgcgga ttcgccgaag tggtggaact
      601 ggtagacgcg ctgcgttcag ggcgcagtgg gcgcaagccc gtgcgggttc gagtcccgcc
      661 ttcggcatgc aggcgggaca gcgaggcggc ggggcagcgc ggcagttcgt acagacactg
      721 agaccctcct atgcggaccc aatgcaggag ggcctttttg cgtccagcta agctgccccg
      781 ccgctccgct gccccgctag taccgcggca ttcccacctc gatccgatcc gcccaggcat
      841 cgatcccacc tgccaggctt cggacccggc tgaaaccggc acccttcaac accgccagtg
      901 ccttcatcga tcgcgctccg tggtggcact gagtcacgat ctcggaatga ccgtcgagct
      961 cgcccagtcg ttccgggagt tctcccagag gaatcagccg ggcaccctcg atatgcgcaa
     1021 tgtcccactc gtgtggctca cgaacgtcga tcagaaccag gtttgacccc ttttccagca
     1081 tctcttctcg taattcctcc ggggtaatct cggggccggt gtacggggtc tctgccccga
     1141 tcccacagaa cgcctcgtaa tcgatcagct cgtggatcgt tcgattcggt ccgcagatcg
     1201 gacaggccgg atcttttcga agctgcagct cacggaagcg cagcttcagt gcgtcgaaga
     1261 ggagcagcct gccgagcaac gaatcgcccg caccgataat ccacttgatg ctctccaatg
     1321 cctgaatgct cccgatgatt cccggcagca ctccgaggac tccgccttca gcgcagctcg
     1381 ggaccagtcc cggcggtggt ggctccgagt agaggcagcg atagcagggc ccctcggctg
     1441 cgtagaacag cgacgcctgt ccctcaaacc ggaatatgct gccatacacg ttcggctttc
     1501 ccagaagaac gcaggcatcg ttgaccagat agcgggtcgg gaagt
//
LOCUS       DASRPQ010000759         1019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3853582, whole genome shotgun sequence.
ACCESSION   DASRPQ010000759 DASRPQ010000000
VERSION     DASRPQ010000759.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3853582"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..501)
                     /locus_tag="VFD73_08755"
     CDS             complement(<1..501)
                     /locus_tag="VFD73_08755"
                     /inference="COORDINATES: protein motif:HMM:NF016032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-cysteine ligase family protein"
                     /protein_id="HZI74093.1"
                     /translation="MKVLSRSVLINDLRNNAFAAPGSGVLSPGRIGAEAELIPVETHT
                     RCRCQIEGDGSTATLPFLRRYGQRQRWKEERTPKGTPCFALPEGGSLTFEPGGQLEYS
                     SPACRSAGHLLGLLRSTILPLRAAAEMEGITLLASGIDPLNSIEAAPLLLHARRYARM
                     AEYLARR"
     gene            complement(498..>1019)
                     /locus_tag="VFD73_08760"
     CDS             complement(498..>1019)
                     /locus_tag="VFD73_08760"
                     /inference="COORDINATES: protein motif:HMM:NF021530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-histidine N(alpha)-methyltransferase"
                     /protein_id="HZI74094.1"
                     /translation="RDLQHPALYAFLGGTIGNFYPPAAIRLLARVRVAMKPEDRFLMG
                     VDLRKDVARIEAAYNDSAGVTAAFNRNMLLVLNHELGADFIPDQFEHCAFYEPVTHRI
                     EMHLVSQGEQQVRIPGIGLIEFQRGESIRTEISCKHDKASVAELFATAGLRLEIWRPD
                     PEALFALVVGSRA"
BASE COUNT          204 a          310 c          326 g          179 t
ORIGIN      
        1 gcggcgagcc aggtactctg ccatccgcgc atagcgcctg gcgtgcagca gcagcggtgc
       61 ggcttcaatc gagttcaggg gatcgatgcc ggaggccagc agagtgatgc cttccatctc
      121 ggcagcagcg cgcagcggca ggatggtgct tcgaaggagc ccaagaagat ggcccgcaga
      181 ccggcacgcg ggggagctgt attccagctg gcctcccggc tcgaaggtga gcgaccctcc
      241 ctccggaagc gcaaagcacg gggtgccttt gggagtacgc tcttccttcc atctctgccg
      301 ttgaccatag cggcggagaa aaggaagcgt agcggtgctt ccatcaccct cgatctggca
      361 gcggcagcgg gtgtgagtct ctaccgggat cagctcggcc tctgccccga tccgaccagg
      421 agagaggacg ccggaccccg gagccgcaaa ggcattgttc cggagatcat tgatcagcac
      481 cgaacgggag agcaccttca tgctcggctc cccaccacca acgcaaagag agcctccggg
      541 tcggggcgcc agatttcaag ccgaaggccg gcggtcgcaa acagctcggc gacactcgcc
      601 ttgtcgtgtt tgcagctgat ctcggttctg atggattcgc cccgctggaa ttcaatgagg
      661 ccgattccgg gaatccggac ctgttgctcg ccttgggaga ccagatgcat ctcgatccga
      721 tgggtgaccg gctcatagaa cgcgcaatgc tcgaactggt cgggaatgaa atcggcgccc
      781 aattcgtgat tgaggaccaa gagcatattg cggttgaagg ccgcggtcac cccggccgaa
      841 tcgttgtagg cggcttcgat ccgcgcgaca tccttccgca gatcgactcc catcaggaac
      901 ctgtcctccg gtttcattgc cacccgaact cgggccagca ggcgaatggc ggctggggga
      961 taaaaattgc cgatggtccc gcccaggaat gcatagagcg caggatgctg gagatcgcg
//
LOCUS       DASRPQ010000760         1082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4480852, whole genome shotgun sequence.
ACCESSION   DASRPQ010000760 DASRPQ010000000
VERSION     DASRPQ010000760.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4480852"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1052)
                     /locus_tag="VFD73_08765"
     CDS             complement(<1..1052)
                     /locus_tag="VFD73_08765"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HZI74095.1"
                     /translation="MSGQERISYFNRSPDTLRYVWLQLDQNLFTSNSRGSFLFDQSSR
                     VATQSAEGGFTLTEVVEVPAGAPLGAKRPAAKPLPYLVNGTVMKVELSRPLPPRGMRA
                     LEIGWSFPFAANSNRMGAEEIDGSTVFEVAQWYPRLAVYDDVRGWNTEQYLGQGEFYL
                     EYGNFDVSLVLPANMLVAATGTLLNPAEVLTATQRARLARARRSDSTIAIRSKEEIGD
                     RSTRPHPQNGQLTWRFRADSVRDFAWAAASHFVWDAARANGGRTLAMSFYPPSAEPVW
                     NQATQFVRFAVESYSSWRRYPYPVAINVNGIEGGMEYPMIVFCHNRTDVPALFSVTDH
                     EIGHTWFPMLVGNNERL"
BASE COUNT          202 a          344 c          337 g          199 t
ORIGIN      
        1 agccgctcat tgttccccac cagcatcggg aaccaggtgt gcccgatctc gtggtcggtc
       61 acactgaaca acgccggcac gtcggttcga ttgtggcaga acacgatcat cggatactcc
      121 atcccaccct cgatcccatt gacgttgatc gcgacagggt agggatagcg acgccatgac
      181 gagtagctct ccactgcaaa ccgtacaaac tgggtcgcct gattccatac cggctcggct
      241 gagggtggat agaagctcat ggcgagggtg cgtccgccgt tggcgcgggc agcgtcccac
      301 acgaagtgtg atgccgcggc ccaggcaaag tcccgaacgc tgtcggcccg aaaccgccag
      361 gtgagctgcc cattttgcgg atggggacgg gtggagcggt cgccgatctc ctctttgctc
      421 ctgatcgcaa tggtagagtc gctgcggcga gcccgggcca ggcgagcccg ttgcgtcgct
      481 gtcagcacct cggccggatt cagaagcgtc ccggttgcgg ccaccagcat gttggcggga
      541 agaaccaggc tcacgtcgaa gttgccgtac tccagataga actcaccctg tcccagatac
      601 tgctccgtgt tccagccgcg cacgtcgtcg tacaccgcca ggcgcggata ccattgcgcc
      661 acctcgaata cggtgctgcc atcgatctcc tcggcaccca tgcggttgct gttggccgca
      721 aaggggaagg accagccgat ctcgagcgcc cgcataccgc ggggaggaag cggacgggag
      781 agctccacct tcatcaccgt tccgttgacc agatatggga gcggcttggc ggcaggtctt
      841 ttggcgccca gcggcgctcc cgccggcact tcaacgacct ccgtgagcgt gaaacctccc
      901 tctgcactct gggttgcaac gcgcgagctc tggtcgaaga gaaacgagcc gcggctatta
      961 ctggtgaaca ggttctgatc gagttggagc catacgtagc gcagcgtgtc gggtgagcga
     1021 ttgaagtagc tgatgcgctc ctgaccgctc actcgccgcg ctacggtgtc caacgaggcc
     1081 cg
//
LOCUS       DASRPQ010000761         1520 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_719285, whole genome shotgun sequence.
ACCESSION   DASRPQ010000761 DASRPQ010000000
VERSION     DASRPQ010000761.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_719285"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..248
                     /locus_tag="VFD73_08770"
     CDS             <1..248
                     /locus_tag="VFD73_08770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74096.1"
                     /translation="NVQLSLRHTICRRRPVALTVTRNGRGDRRVFRAVPPRPLVFELP
                     GLPDSPSGLPWRQTPANPNLFAHQPDSPWRACPSAYH"
     gene            693..>1520
                     /locus_tag="VFD73_08775"
     CDS             693..>1520
                     /locus_tag="VFD73_08775"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HZI74097.1"
                     /translation="MDVGAWLKNLSLEQYEAAFRENDVDAEMLPTLTAEELKDIGVSS
                     LRHRRRLLEAIAALRSSAMPAEVPAPVSASPEPADPSGPVDLSETTAERRPLSVMFCD
                     LLGSTALSARLDPEDLREVIRSYQARVAATIQRFNGFIARYVGDGVLIYFGWPQAHET
                     DAERAVRAGLAVAAAVSEAPVAGQTLQVRIGIATGLVVIGEPIGSGDSRQQTAVGGTP
                     NLAARLQSLAGPGQVIIDAATRRQIGGLFDCRDLDTITLKGLPEPVPAWQVLGAGTAE
                     "
BASE COUNT          251 a          522 c          466 g          281 t
ORIGIN      
        1 gaaatgtgca gctctccctc aggcacacca tctgccgccg gcgtcccgtc gccctcaccg
       61 ttacgcgtaa cggcagggga gaccgacggg tcttccgcgc cgttcccccg aggccgctcg
      121 tgttcgagtt gcctggtttg cccgattcgc cctctggttt gccttggagg caaaccccgg
      181 caaacccgaa cctgttcgcg catcagcctg acagcccctg gcgtgcctgt ccttccgcct
      241 atcactgatc cgcccaccca ggaaatagga gagcaccccc tggcatttgt tgatccggat
      301 ccgcagaaaa cctggtagat gcctgttccc gttctctgtc tgcggccgtg tgagagccta
      361 cagggggctc gataacgcct gccgcacttt ccttcatgtt tgcgcagtcc cggcacttgc
      421 cggggcacct gcggcccctg cggcctattc cgcaattggt cctgaccgcc ttgcatcact
      481 gtctccgcgc tgatgacagc agcagtgtct caagtcagaa accagtgctc cggagtcttc
      541 accgcacaat gccgctggcg ccgcagccag aaacccgtcc ctggtatgaa ccaaaaatcg
      601 caggacggaa acctgtgctt ctgtgcctcg acagaagcag cacccctgcg caatagtctg
      661 cttcaagcat caccggcctg gaggaggtgg cggtggatgt tggggcgtgg ctgaagaacc
      721 tgagcctgga acagtatgag gcggcattcc gcgagaatga cgttgatgcc gagatgttgc
      781 ccacgctgac tgcggaggaa ctcaaggaca tcggcgtcag ttccctccgc caccggcggc
      841 ggctgctgga agcgattgcc gcattgcgct ccagcgccat gccggctgag gttcccgccc
      901 cggtctcggc ctctcctgag ccagccgatc cgagcgggcc agtggatctg tctgagacca
      961 cggccgaacg ccgcccgctc agcgtgatgt tctgcgacct cctcggctcc actgccctct
     1021 ccgcccggct cgatcccgag gacctacgcg aggtcatccg cagctaccag gcccgtgtcg
     1081 ctgccaccat ccagcggttc aacggcttca tcgcccgcta cgtcggcgac ggcgtgctga
     1141 tctacttcgg ttggccacag gcgcatgaga ccgatgccga acgcgccgtg cgggctggtc
     1201 tcgccgttgc tgctgcggtc agtgaggcac ccgtggctgg tcagacgctc caggtacgca
     1261 ttggcatcgc cacagggctg gtggtgatcg gcgagccgat tggctctggg gattcacgcc
     1321 agcaaacggc agtcggaggg acccccaatc tggcagcccg cctgcagagc cttgccggac
     1381 ccggccaggt gatcatcgac gcggcgaccc gccggcagat cggcggtctg ttcgactgcc
     1441 gggacctcga taccatcacg ctgaagggct tgccggagcc ggtgccggcc tggcaagtgc
     1501 tgggcgcggg cacggcggaa
//
LOCUS       DASRPQ010000762         5096 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_90716, whole genome shotgun sequence.
ACCESSION   DASRPQ010000762 DASRPQ010000000
VERSION     DASRPQ010000762.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5096
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90716"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..305)
                     /locus_tag="VFD73_08780"
     CDS             complement(<1..305)
                     /locus_tag="VFD73_08780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HZI74098.1"
                     /translation="MARQTSLDRYRNIGIMAHIDAGKTTTTERILYYTGKNYKIGEVH
                     EGAATMDWMEQEQERGITITSAATTCFWKRNGTPYRINIIDTPGHVDFTVEVERSLRV
                     "
     gene            complement(627..1097)
                     /gene="rpsG"
                     /locus_tag="VFD73_08785"
     CDS             complement(627..1097)
                     /gene="rpsG"
                     /locus_tag="VFD73_08785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007406077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HZI74099.1"
                     /translation="MSRRNKSVKRPVPPDPRYDSQTVSKFVNNLMYEGKKSVAEGIFY
                     SAMDLIEERTGQPGVSVFKQAVNNAKPTLEVKSRRVGGASLQVPVEVRPDRRTALAMR
                     WIIQFSRTRTEKTMSERLAAELILASKGEGNTIKKKEDTHRMAEANRAFAHYRW"
     gene            complement(1098..1502)
                     /gene="rpsL"
                     /locus_tag="VFD73_08790"
     CDS             complement(1098..1502)
                     /gene="rpsL"
                     /locus_tag="VFD73_08790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HZI74100.1"
                     /translation="MPTINQLIRRGRKMVEAKDKAPALRDNPQKRGVCTRVYTTTPKK
                     PNSALRKVARVRLTNGFEVTAYIPGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGTL
                     DSAGVNDRRQSRSKYGAKRPKAGGAAGGKGGK"
     gene            1856..4627
                     /locus_tag="VFD73_08795"
     CDS             1856..4627
                     /locus_tag="VFD73_08795"
                     /inference="COORDINATES: protein motif:HMM:NF027637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent metalloprotease"
                     /protein_id="HZI74101.1"
                     /translation="MSHSARWFLGALLAGCGAISAHAQQSTGPASATAADTIDPADHS
                     GDRETLPERDRKDVPWRSFSEVTKGTRFQAGIFGLYTKRDNNYLSLAPAQLDRDFLLV
                     TQLSQGIGELGIDGGTSVRSDLVRFHRSGDRIELWVVNPHFAADSGTPMARAVAYSFG
                     HSVAQSFPIATMRDNGEVLIDVGPFLLSDWADLGSFFQGIANQRKLSGSIFLDRERSS
                     LEQLHLFPTNLEADVRLTYQSNRNLGLETIADYRWIPVGIHYSLVELPRTPMRPRYAD
                     ERVGYFVSAIKDFSRDTADGFFVRYVNRWRLEKRDPSAALSEPVKPIVYYLDRTVPAE
                     WRPWVRAGILEWNHAFEEAGFRNAIQVLDAPEDTLWSAEDARYSTVRWTATNRSVYAV
                     GPSNVDPRTGEILNADVLVSAQWIQTWRGESGEYVAPQVAVRASLAEDSAASDPRGET
                     RLCSLAEGMRREATLSRAVLAARPGGMGGAAAREYIGQALKALIMHEIGHTLGLRHNF
                     RGSAGVTRSQLLDRAYTHAHGMGVSVMDYSPPALSLDPRKQGDYYATTIGSYDRWAIR
                     YGYTQLGEPTAAQGKGSAAVPADWAPENEVKALRSIAAEAADPSHLYGTDEDAGFGSL
                     GLDPTVSRYDQTDDPLGWARERVTLINSLFDSLPAKMVAPGQSYSRLRSAFTDLLNDR
                     WYATLVTTKYLGGATTARDHRGDPSARPAFTTLPATSQRQALAFIVDAGFGESAYRFS
                     PDLLSHLGPDRWRHWGSTPGSDGRIDFPLHDWAMAQEGALLNQLLDPVVLSRMRDAEL
                     RATDSQPTVTLPELFATLTGAIWSELGYPRSDGKLSVPRSITSVRRDLQRLYLNSLIR
                     MVVSPLPDTPEDARSLARMTLADLATQVDRARRMDLDTYTRAHLADSRERIAQALNAQ
                     MFQNAGLPR"
     gene            4665..4790
                     /locus_tag="VFD73_08800"
     CDS             4665..4790
                     /locus_tag="VFD73_08800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74102.1"
                     /translation="MVQTAVYMAGVLGGYVLLVRPDEWQQAWDVIRSAWSKPSQD"
     gene            4829..>5096
                     /locus_tag="VFD73_08805"
     CDS             4829..>5096
                     /locus_tag="VFD73_08805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI74103.1"
                     /translation="MIPATEAIAVQIRNLRKAYGEVVAVDGLDLDIHTGECFGLLGPN
                     GAGKTTTIEICEGLNTPDEGEVLVLGRRWGERDRELRELLGISLQ"
BASE COUNT          883 a         1659 c         1542 g         1012 t
ORIGIN      
        1 actcggagtg agcgctctac ttcaacggtg aaatcgacgt gtccgggagt atcgatgatg
       61 ttgatgcggt agggagtgcc gttgcgcttc cagaagcagg tggttgcggc ggaggtaatg
      121 gtgattcccc gctcctgctc ctgctccatc cagtccatgg tagcggcgcc ctcgtgcact
      181 tcaccgatct tgtagttctt gccggtgtag tagaggatcc gctcggtcgt agtcgtcttg
      241 ccggcatcga tgtgtgccat gatgccgatg ttgcgatagc gatcgaggga tgtctgtcga
      301 gccattccta cccctaacga aaaagcgggg cgaccaaccg ggaagattcc cgtggtatcg
      361 ctccgcgcac atccgggcgc tggccctgga tgaggacccg tctgggtccc acgcgttgtg
      421 tattggagga tcagaggtgg cccaggaact ccgtcgagtc acataatccg atgttgtcgg
      481 cgcaaaaaag cgccaagccc gaggaaaata gtgagttagt ccctcatgtc aacccgagag
      541 atcaggcttc ttctcggtga ttgccacaaa aagggcgcct ctctcgaagc gcccgatcgt
      601 actgccccgc tgccccgctg ccccgcttac cagcgataat gggcaaatgc ccggttggcc
      661 tcagccatcc ggtgggtgtc ttccttcttc ttgatcgtgt tcccttcgcc cttggacgcc
      721 agaatcaact ccgccgccag ccgctcggac atggtcttct cggtgcgggt gcgcgaaaat
      781 tggatgatcc agcgcatggc aagtgcggtt cgccgatcgg gacggacctc caccggcacc
      841 tgaagcgacg cgccaccgac ccggcggctc ttcacctcga gcgtgggctt ggcgttattg
      901 accgcctgct tgaacaccga gactccgggt tgccccgtac gctcctcgat gaggtccatg
      961 gccgaataga aaatcccttc agccacgctc ttctttcctt catacatcag attgttcacg
     1021 aacttcgaga cggtctggct gtcgtagcgg ggatccggcg ggaccggacg tttaaccgac
     1081 ttgttgcggc gactcactta cttccctccc ttaccgccgg cagcgccgcc agccttgggc
     1141 cgcttggccc cgtacttgga acgactctgc cgacgatcgt tgacgccggc cgaatccagg
     1201 gtgccccgaa caatgtgata gcgaacgccg ggcagatcct tcactcggcc gccccgaatg
     1261 agaacgatgg agtgctcctg aaggttgtga ccctctccgg gaatgtaggc ggtgacctcg
     1321 aacccgttgg tcagcctcac acgggccacc ttgcgaagcg cggagttggg cttcttggga
     1381 gtggtcgtgt atacccgggt gcagactccc cgcttctgcg ggttgtcccg gagcgccggc
     1441 gccttgtcct tggcctcaac cattttccgg ccgcgccgga tcaactgatt aatagtcggc
     1501 ataaccttgg tgctgaagag aatcagagag tcccgtttcg ggacagaccg acaaaattag
     1561 tagcctgctg gagttaggtc aagaatcagc ggcatggagg ccgattcgcg ggagagggga
     1621 atcttgttgt tgagtgaatt ctcctctttc cagactgccg cgctgccccg ccgcctcgct
     1681 gccccgccgt tttttgcact cgcggctggc tttttgaaag gtgccattga cgcaaccccg
     1741 ctgaaatcct ccgtttgccg ccacttgtcc tagcggcccc caacttgccc atacccctcg
     1801 ccagtcgtgt ccctcccggg acgttcctct ggttttcctg ttgtccggag ttgccgtgtc
     1861 tcactctgct cgatggttcc tcggcgcgct gctcgccggg tgtggcgcca tcagcgccca
     1921 cgcgcaacaa tcgaccggcc ccgcgtccgc gaccgctgcc gatacgatcg atcccgctga
     1981 tcactccggc gatcgcgaga cattacccga gcgagaccgg aaggacgtgc cctggagatc
     2041 gttctccgag gtcaccaaag gcacccggtt tcaggccggc atcttcgggc tctacactaa
     2101 gcgcgacaac aattatctgt cactcgctcc ggcccagctg gaccgggact ttctccttgt
     2161 tacgcagctt tcccagggga tcggcgagct cggcatcgat ggcggtactt cggtgcgatc
     2221 cgatctggtg cgatttcacc gctccggcga tcggatcgag ctctgggtcg tcaatcctca
     2281 ttttgccgca gactccggga cgccaatggc ccgggcggtg gcgtattcgt tcggtcattc
     2341 ggtcgcgcag tcattcccca ttgccactat gcgggacaac ggcgaggtcc tcatcgacgt
     2401 tggtcccttt ctcctctccg actgggccga cctgggctcg ttcttccagg gcatcgccaa
     2461 ccagcgcaag ctctccggca gcattttcct cgaccgggag cgctccagcc tcgagcagct
     2521 acacctcttt cccacgaacc tcgaagccga cgtccggctg acgtatcagt cgaatcggaa
     2581 tctgggactg gagacgatcg ccgactatcg ctggattccg gtcggcattc actattcgct
     2641 cgtcgagctc ccacgcactc cgatgcggcc ccgctacgcg gatgagcggg tggggtactt
     2701 tgtctcggcg atcaaggatt tctcccgcga caccgctgac ggcttctttg tccgctacgt
     2761 gaaccggtgg agactggaaa agcgggatcc ctccgccgct ctcagtgagc cggtcaaacc
     2821 gatcgtctat tacctcgacc gcaccgttcc cgcggaatgg cggccgtggg tgcgcgccgg
     2881 gattctcgag tggaaccatg ccttcgagga ggcggggttc cggaacgcga tccaggtgct
     2941 cgatgccccg gaggacacgc tctggagcgc cgaggacgcg cgctactcaa ccgtgcgctg
     3001 gaccgccacc aatcggtcgg tctacgcggt cggtccttcc aatgtcgatc cccgtactgg
     3061 agaaatcctg aatgccgacg tgctggtttc cgctcagtgg attcagacct ggcgaggcga
     3121 gtcgggcgag tacgtagcgc cgcaggtggc ggtgcgagcc agtctggcgg aagactctgc
     3181 cgcgagtgac cccaggggcg agacccgtct ctgcagcctt gccgaaggca tgcggcgtga
     3241 agcgacgctc agccgagcgg tgcttgccgc acgccctggc ggcatgggcg gagcggcagc
     3301 acgggagtat atcggccagg cgctgaaggc cctcatcatg catgagatcg gacacacgct
     3361 cggcctccgg cacaacttcc ggggctcggc gggcgtcacc cgatctcagc tgctggaccg
     3421 agcgtatacc cacgcgcatg gaatgggcgt gtccgtcatg gactacagcc cgccggcact
     3481 ctcgctggat ccgcgaaagc aaggcgacta ctacgccaca acgatcggaa gctacgatcg
     3541 ctgggcgatc cgctacggct acacccagct cggcgagccg acagccgctc aggggaaagg
     3601 ttcggctgct gttccggccg attgggcacc ggagaacgag gtcaaggcac tccgttcgat
     3661 cgcggccgag gcagcggatc catcgcacct gtacggcacc gacgaggatg ccgggttcgg
     3721 aagtctgggc ctggacccca ccgtctcccg gtacgatcag accgacgacc cgctggggtg
     3781 ggcgcgcgaa cgcgtcaccc tgatcaacag cctcttcgat tcgcttccgg cgaagatggt
     3841 ggctcccgga cagagttact cgcggctccg ctccgccttc accgatctcc tcaacgatcg
     3901 ctggtacgcc actctggtca cgacgaagta tctcggtggc gccaccactg cgcgcgacca
     3961 ccgcggtgat ccctcggctc ggccggcgtt caccaccttg cctgccacct cacagcggca
     4021 agcactcgca ttcatcgttg acgccggctt cggcgagagt gcctaccgtt tcagcccgga
     4081 cctgttgagc cacctgggcc cggatcgctg gagacattgg gggtcgacgc ccggcagcga
     4141 tggccgcatc gacttcccgt tgcacgactg ggcgatggcg caggaggggg cgctcctcaa
     4201 ccagcttctc gatccggtgg tgctctcccg gatgcgggat gccgagctcc gggcgacgga
     4261 ctcccagccg acggtgactc tcccggagct ctttgccacg ttgaccggag caatctggtc
     4321 cgagctcggg tatccgaggt ccgatgggaa gctctcggtt ccgcgcagca tcacatcggt
     4381 acgacgcgac ctccagcggc tgtatctcaa cagcctcatc cgaatggttg tgagccccct
     4441 tccggacacg ccggaagacg cccgcagcct cgctcgtatg acgctcgccg acctcgcaac
     4501 tcaagtagac cgcgcgcggc gaatggatct cgatacctac acccgggcac acctggccga
     4561 ctcccgcgag cggatcgccc aggcactcaa cgcccaaatg ttccagaacg ccggacttcc
     4621 gaggtaatga catcatgttg atggcttctt ctgacccgtc tccattggtt caaaccgccg
     4681 tgtacatggc cggtgtgctc ggcggctacg tcctgctggt ccggcccgat gaatggcagc
     4741 aagcctggga cgtgattcgg agtgcctggt cgaagccttc ccaggactag ctctgttgcg
     4801 ggaccggctc tgcttatgat tctcctccat gatcccggcc accgaagcta tcgcggttca
     4861 gattcgcaat ctccggaagg cttacggaga agtggtcgcg gtggacggcc tagacttgga
     4921 catccacaca ggcgaatgtt tcggcctgct gggcccgaac ggagccggca agaccacgac
     4981 aatcgagatc tgcgagggcc tcaacacccc ggatgaaggg gaggtcctgg tcctgggccg
     5041 ccgttggggt gagcgcgacc gggaactgcg ggaactgctc ggaatatctc tgcagg
//
LOCUS       DASRPQ010000763         1739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3230717, whole genome shotgun sequence.
ACCESSION   DASRPQ010000763 DASRPQ010000000
VERSION     DASRPQ010000763.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3230717"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(315..875)
                     /locus_tag="VFD73_08810"
     CDS             complement(315..875)
                     /locus_tag="VFD73_08810"
                     /inference="COORDINATES: protein motif:HMM:TIGR01382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HZI74104.1"
                     /translation="MPMLDNLRVAVIATDGVEEPELAEPVSALREAGAQTELLSVRSG
                     QIQAVRHDLQPAQTFGVDKTLDQADPGAYDALLLPGGAVNADRLRMEPGVQSFIKQIN
                     GAGKPMAVICHAPWELVSSGLARGRTLTSYHTIQDDLRNAGATWVDREVVVDGNLVTS
                     RQPGDIPAFTREMLSLFAVARSGSAG"
     gene            complement(1191..1451)
                     /locus_tag="VFD73_08815"
     CDS             complement(1191..1451)
                     /locus_tag="VFD73_08815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74105.1"
                     /translation="MTDAATRGLQWEASLASSDGEGRRRGLECGPGPGGPGDDCADAP
                     ADADERSASTEMADGMAAMFGRLREAAAAHDTSELNDIALPS"
BASE COUNT          252 a          593 c          548 g          346 t
ORIGIN      
        1 tataggcttg ccgtcgtgac gcgcctcgag acctgctgct ccccatccgg gcttccggtt
       61 agcggagcgg ctccctatgg ctacaagcag ccggggacgg ggtgcctggc tacgccatgt
      121 gaatgcggct gcgaggcctc agcgcttgca ggcacacata tcgccgaata tttcctgcct
      181 acagccatgc cgtgggcgcg gttggctgta cgcagatcat ctggttctgc gcggtcactg
      241 gcgtgccgta gtgcggctac cctggctggc cgagggctga agaccggcgt cccaggtgct
      301 gggtctgtgc ggtcctagcc tgccgatcca gatcgggcca cggcgaacag gctgagcatc
      361 tcgcgggtga aggctgggat gtcgcccggc tgtcggctgg tcaccaggtt gccgtccacc
      421 acaacctccc ggtccaccca ggttgcgccc gcattccgca ggtcgtcctg gatggtgtga
      481 tagctggtca aggtccggcc gcgggccagg ccgctcgaga ccagctccca cggggcgtgg
      541 cagatgacag ccatcggctt cccggcacca ttgatctgct tgatgaagga ctgcacgccc
      601 ggttccatcc gcaaccggtc ggcgttgacc gcgccgccgg ggagcaggag cgcgtcgtag
      661 gctcctggat ccgcctggtc tagtgtcttg tcgacgccga acgtctgggc cggctgcagg
      721 tcgtggcgga cggcctggat ctgcccggat ctaaccgaca gcagctcggt ctgggcaccc
      781 gcttcgcgca gcgcgctgac cggttcggcc agttccggct cctccacccc atcggtggcg
      841 atcacggcaa cccgcaggtt gtccagcatg ggcatggcat cctccttgat ctctcaaacc
      901 ctggcgttgt gcgtacttct catgtcagcg agacagcctc ctccctcacc taaggtcttc
      961 cgaaaccgtg gacacttcca tctgaagtga tcttgtttcg gtcgccgggt ctcttatgtt
     1021 ctatgagagc gccgaagcgc aagttctgtc caagtgcagc cccgcaaggg ccgtcggccc
     1081 gcgtaggaac gacccgacga aaccgaacgg cccccgatac taggctctcg tttactaatg
     1141 acgccaatga cggtgcgcgg cgcaagggct gggcttgccg aggattgccc ctaacttggc
     1201 agcgcgatgt cattcagttc gctcgtatcg tgggctgcgg ccgcttcgcg gagcctgccg
     1261 aacatggcag ccatgccgtc ggccatctcg gtactggcgc tacgctcatc cgcatcggcc
     1321 ggggcgtccg cgcaatcatc gcccggcccg cccggccctg ggccgcactc cagccctctc
     1381 cggcggccct cgccgtcgct gctagccagg cttgcttccc attgcagccc tctcgtagct
     1441 gcatccgtca ttacatcctc ctgccacgaa acctgtttcc cccgcgcgcg ccgacagccg
     1501 cgcctgacct atgccacgta tgtccggccc ccggctccgg caaccgcgcg gaagccggag
     1561 ccgggtgcgg gatggcaggc gctcttaact ggtgcgcagc gccttgatga gttgcttctt
     1621 gttcatggtt gaccggcctt tgatgccgac ctgcttggcc ctgcggcgca gctgtgggac
     1681 tttccagtta gcgtaggagg ttgccgatcc gccgcgctgg ctggcctttt tgcgggaag
//
LOCUS       DASRPQ010000764         1465 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4162404, whole genome shotgun sequence.
ACCESSION   DASRPQ010000764 DASRPQ010000000
VERSION     DASRPQ010000764.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1465
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4162404"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..359)
                     /locus_tag="VFD73_08820"
     CDS             complement(<1..359)
                     /locus_tag="VFD73_08820"
                     /inference="COORDINATES: protein motif:HMM:NF021197.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2397 family protein"
                     /protein_id="HZI74106.1"
                     /translation="MADRSRHGLFRYLTADESADYLAIMGLFSATLLTDLSAAEVASE
                     LAECGLAMDRDIAEVRCRQLVTWGNLVPSLRDARVSTVAEYIRSRSRYQVSKLGGRLH
                     REAVAILHASDGAREVAR"
     gene            574..855
                     /locus_tag="VFD73_08825"
     CDS             574..855
                     /locus_tag="VFD73_08825"
                     /inference="COORDINATES: protein motif:HMM:NF014643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008219 - cell death [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HZI74107.1"
                     /translation="MSITASEARRSLFPLIKKVNEDHDAIEIVSKHGNAVLVSADDFS
                     ALREGAYLLRSPANARRLLQAYENALNGVNLTEHQLIDPDAADPRGGDR"
     gene            852..1106
                     /locus_tag="VFD73_08830"
     CDS             852..1106
                     /locus_tag="VFD73_08830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016292806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008219 - cell death [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Txe/YoeB family addiction module toxin"
                     /protein_id="HZI74108.1"
                     /translation="MRLVFENQGWEDYTSWLRIDRKTLVRINKLIEDILRDPFIGIGK
                     PEPLKYHLPGAWSRRIDDEHRLVYLVTDKEVIIIAARYHY"
BASE COUNT          293 a          478 c          453 g          241 t
ORIGIN      
        1 cgggccacct cgcgcgcacc gtcactagcg tgcagtatgg cgactgcctc acggtgcagg
       61 cgcccgccga gcttcgacac ctggtaacgg gaacgggagc ggatgtactc ggcgaccgtg
      121 ctaactctcg cgtcccgcag agatggcaca agattgcccc aggtgacgag ctgtcggcag
      181 cgcacctcgg caatgtcgcg gtccatggcc aagccgcact cagcgagctc ggaagctacc
      241 tcagcggcgg agagatcggt gagcagggtg gccgagaaga gacccatgat ggccaggtag
      301 tcggcggact catcggcggt caggtagcgg aacaggccat gccgggaacg atccgccaac
      361 ggtatgcccg cgtccgaagg ctccacagcg gcaaggctag atgagcgggc cgacatttcc
      421 gccgaatcgg aggtgtccga ccctgaggcc cggcggttta gcctacttcg ttgcggcgcc
      481 ggacattggc cctgagcccg tcagcatctc catcccgaac ggccgctcac cggtggtacg
      541 ctatctggta ctagtcgagg agggttcgac ggcatgtcca tcaccgcgag cgaggcccgc
      601 aggagcctgt tcccactcat caagaaggtc aacgaggacc acgatgccat cgagatcgtc
      661 tccaagcacg gcaacgcggt cctggtttca gccgacgact tttcagcctt gcgagaaggc
      721 gcctacctgc ttcgctcgcc cgcgaacgcc cgccgcctgc tccaggcgta cgaaaacgcc
      781 ctgaacggcg tcaaccttac tgaacaccag ctcatcgacc ccgacgccgc ggacccgcgg
      841 ggcggcgaca ggtgaggctg gtattcgaaa accaaggctg ggaggactac acatcctggc
      901 tcaggatcga ccgcaagacg cttgtccgga tcaacaagct catcgaggac atactccgag
      961 accccttcat tggcattggc aagcctgagc cgctcaagta ccatctgccc ggggcttggt
     1021 cgcggcgcat cgacgacgag caccgacttg tctacctcgt cacggacaaa gaagtcatca
     1081 tcattgccgc ccgctaccac tactgacagc ccaccatctc gcatccgcag tcggcggccc
     1141 gactctgcgt aaatgccttc gcactcatga tggcgggtca gcgcgagcgc ccagccaggc
     1201 caagcaggta cggaaaggtc gtgtccgagg gggagttaaa cccccatggc tgtgacctgc
     1261 ggcttcaccg gacttcgtca ccaccccgga cacgaacccg caggtcagcg cggatgtgaa
     1321 tgtgtccgag gggggacttg aaccgttcgc ctatatcaca gcggtaggca cagatccctg
     1381 gctcggcgtc tgaccagcga ttctagccgg gtgtgagtgg acttggagtg agcggtgacg
     1441 ccatcatgct gcttcggtgg tggcc
//
LOCUS       DASRPQ010000765         1524 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_720277, whole genome shotgun sequence.
ACCESSION   DASRPQ010000765 DASRPQ010000000
VERSION     DASRPQ010000765.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_720277"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(436..768)
                     /locus_tag="VFD73_08835"
     CDS             complement(436..768)
                     /locus_tag="VFD73_08835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74109.1"
                     /translation="MNRYEMIWNVVEGRIKDDEQEVRPLDPRLLEIGKGVLKEISALY
                     RMSKPPTAVEEDPDAELTIVDRRELIAASLDQLEAKRNAQEEAARERAAAAQAARDAA
                     AGEDEAAA"
BASE COUNT          249 a          475 c          504 g          296 t
ORIGIN      
        1 acacgcacaa gatcaacgcc tcgacattgg aaatccgtgg cgaagggttc actcctcgta
       61 acagcggacc ttgctcctgt ggagcgaagg tctgggaccg ccacgtcatc acctgcagca
      121 tcctcgggga aaacgcagcc accatgatcg gcggaccaaa cgccggcatc tggcgccccc
      181 agccagcacc aactcggcca actctcgtgt cccagcccgc accccaggaa ccagccgcct
      241 ccacccaaga acccgacctc accgaggcgg aaatagaggc gctgctcggc ccctgcacgt
      301 gcgggcagga acccatctgc ttgcccagct gcgccagggc ctagaacctt cgcgtcctgg
      361 gccttggccc ggccggcagc aaacagccag ggtcgagttc acgaagcttt ggcccgcgcg
      421 gcgtggacca acgggtcagg cagcagcctc gtcctcgcct gcggcagcgt cccgggcggc
      481 ttgggcggcg gcggcgcgtt cccgggcggc ttcttcttgg gcgttgcgtt tggcttcaag
      541 ctggtcgagg ctggcggcga tcagctcgcg ccggtccacg atggtcagct cagcgtctgg
      601 gtcttcttcc accgcggtgg gcggcttgga catgcggtac agggcggaga tttctttgag
      661 cacgcctttg ccgatctcca gcagccgcgg gtcgaggggc ctgacttctt gttcgtcgtc
      721 tttgatgcga ccttcgacca cgttccagat catttcgtag cggttcatga gcagggcccg
      781 gaccctgggc tgtgactcga ccaggttctc ttcggtgatc tcgggcagtc ggcccggtag
      841 ttcctgcata gccgcatgct cccacatcta cgggtaggta cccaagcccc ccggatccaa
      901 catgcatgtg attttatcat tataaattgg acatgatctg agtttcaaag gtcctattcg
      961 gcctcgcgca tgcagccaga gcagcatcag aggcattgaa gaggagcaaa gtcttggatc
     1021 aagggccggg ggcacgggag gagcgactgt gcgtagcttg gaccgccctg ctggaccttt
     1081 ttccttttgc ctggcggctt ggatcttgcc ccgggtatcg aggggcggcg atacaggctg
     1141 gatgaggctg ggggggttgg ggctcgcttc aagatcactg atcttgctac aggctgtagg
     1201 ggggtcctac atgatgtagg ggcgcgaggc tagggatagg tgctggtcac tgcctgtcct
     1261 ggtcctaggt tcatggtagc agcggctgag tctgtccaca atggagcatc gccgatattc
     1321 gcctgcgcaa tccgcgcccc gtgatgcggg cctgcccgta ccgtggaccg tggcgctagg
     1381 accgtagccc gggtggaccg tggaccgtgg cgcaccgtag ctcggaccgt gggccgtgga
     1441 ggcttggacc gtgggccgtg ggccgtgggc cgatcccctg cccctcgatg ggccagggcc
     1501 cttggcttcg ccagggggca gggg
//
LOCUS       DASRPQ010000766         1316 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1030015, whole genome shotgun sequence.
ACCESSION   DASRPQ010000766 DASRPQ010000000
VERSION     DASRPQ010000766.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1030015"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1245)
                     /locus_tag="VFD73_08840"
     CDS             complement(<1..1245)
                     /locus_tag="VFD73_08840"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZI74110.1"
                     /translation="MRYPALLLFSLVAACRSTADRRGATVLFASGADLQSINPLLTLH
                     PLARQIQRYVLLTTLARYDSTLTPHPYLARSWEWSSDRRRLTFHLQTAVRWDDGRPTT
                     ARDVLWTLRAARDPATGYPRANDLASLEAVVAPDDSTAVLQFRSAPRSFPDVLTDLAI
                     LPAHLLDSVPHDRLRQAAWNTTPVGNGPFRFVAHDPNRRWVFQRNSTFPKILGGPPRL
                     KRFIVVVVNEPTTKLAALTSGELDVAGIQPAHAEFVRRDPNLRVLSYPILWTDGIVFN
                     TRRGPFNALEVRRRLNASINRQELVDGYIYGFGTPAFGPVPPAAPQYVPVVNVAQGAP
                     ERRAAPPFRFELLTVGSGEGALEQMLQAMLKPAGFDVSIRQLELSAFLARVYGAHDFQ
                     AAEMGIPGDPGLGYLQPLAELAG"
BASE COUNT          264 a          406 c          442 g          204 t
ORIGIN      
        1 tcccgccaac tccgcgagcg gctggagata gcccaggccg ggatcacccg gtatacccat
       61 ctctgcagcc tggaaatcgt gggcaccgta gacccgggcc agaaaggcgg acagctccag
      121 ctgccggata ctcacgtcga aaccggccgg cttgagcatg gcttgtaaca tttgctccag
      181 cgcgccttca ccactgccga cagtgagcaa ctcgaaccgg aacggcggag cggccctccg
      241 ttctggggca ccctgcgcca cattcaccac tggtacgtac tggggagccg ccggcgggac
      301 cggcccgaat gccggcgttc cgaatccata gatgtacccg tctaccagct cctgccgatt
      361 gatcgaggca ttgagccggc ggcggacctc aagcgcattg aatggccccc ggcgggtatt
      421 aaagacgatg ccgtcggtcc agagaattgg atagctgagc actcggagat tgggatcgcg
      481 acggacaaac tcggcgtggg cgggctgaat accggccacg tcgagctcgc cggacgtgag
      541 cgccgcgagt ttggtggtcg gctcgttaac taccacgacg atgaaacgct tgagccgggg
      601 cggtccgccc aggattttcg gaaaagtcga gttgcgctgg aacacccaac gccggttcgg
      661 atcatgcgcc acgaagcgga agggcccatt cccgaccggc gtcgtgttcc aggcggcctg
      721 ccgaagacga tcgtgcggca cgctgtccag gagatgcgcc ggcaggattg ccaaatcggt
      781 caggacgtcg gggaatgagc gtggagcgga tcggaactgc aacactgccg tcgagtcgtc
      841 gggagccacc accgcctcga gcgaagccag atcgttggca cgagggtaac cggttgccgg
      901 atcgcgcgca gcacggagag tccagagcac gtcgcgggcg gtggtcggcc ttccatcatc
      961 ccagcgcacc gcggtctgca aatgaaaggt gagccgccgt cggtcggacg accactccca
     1021 actccgcgcc aggtaagggt gcggcgtcag cgtgctatcg tagcgggcca gggtcgtcag
     1081 cagaacgtag cgctgaatct gccgggccaa cggatgcagg gtgagaagtg gattaatgct
     1141 ctgcaggtcc gcgccggagg caaagagcac ggtggcgcct cgccggtccg cggtggagcg
     1201 gcaggctgca accagagaga acagtaggag agccggataa cgcatgcgca cggcgtattc
     1261 tatctcctca ccccagcaag ctgcagcacg gcttccggcg gtgcctagat tggagc
//
LOCUS       DASRPQ010000767         2961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4483665, whole genome shotgun sequence.
ACCESSION   DASRPQ010000767 DASRPQ010000000
VERSION     DASRPQ010000767.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2961
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4483665"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1658)
                     /locus_tag="VFD73_08845"
     CDS             complement(<1..1658)
                     /locus_tag="VFD73_08845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HZI74111.1"
                     /translation="MLLKNFKWLVLAILGAVAWAVLALHRGETVSAAWLVLAAVGTYL
                     LAYRFYSRFLAFKVFGLNDRRATPAERLQNGRDYVPTSRWVLFGHHFAAIAGAGPLVG
                     PVLAAQFGYLPGTLWLVFGVVFGGAVQDFIILFGSMRRDGKSLGQMAKEETGPFTGLL
                     AMIAILAIMIILLAVLALVVVNALKDSPWGVFTILCTIPIAVLMGFWMKAWRPGRTLE
                     ASAIGILLLLLALVGGRYVSQSTMLAPYFSASGLTIAYAMIAYGFIASVLPVWMLLCP
                     RDYLSTFMKIGTILLLALGILLVLPPLKLPAVTRFVDGTGPVFAGKLFPFAFITVACG
                     AISGFHALVASGTTPKMLVRESDARLIGYGGMLMESFVAIMALCAAALLDPGIYFAIN
                     APITSLGGSVQSAAEVIRGWGFTVTPDQIQSLAASVGEKTLLGRTGGAPSLAVGMAHI
                     FSSAFGAGLMALWYHFAIMFEALFILTTVDTGTRVGRFMLQELAGHVWRPLGRTSWYP
                     STLLASALVVAGWGYFLVQGVQDPLGGINSLWPLFGISNQLLAAV"
     gene            1747..2613
                     /locus_tag="VFD73_08850"
     CDS             1747..2613
                     /locus_tag="VFD73_08850"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HZI74112.1"
                     /translation="MPLPSFGFGHRPSWEYEAPEGAGAALEEPRPQPITRGWRGKAAV
                     ITGGATGLGRHICMEFARLGCHVAFCFVNMPGRDVSEQALLTETALSAMGVQVHVRRC
                     DVRDRDAVEHFIRETKERLGGLHFLVNNAGIANDGALWRLTREAWSDVLDTNVTGAFN
                     CIRAVAPIFRAQHYGKIVSVSAHQADRPGFGVANYAASKAALQGLTRAAAVELGPANV
                     NVNAVAPGFIRTERMAMLPSEVIERAQKSSVLGRVAEPDDVAHVISFLCSESARHITG
                     QIIVVDGGLSLE"
     gene            2662..>2961
                     /locus_tag="VFD73_08855"
     CDS             2662..>2961
                     /locus_tag="VFD73_08855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74113.1"
                     /translation="MPSISRRVVPPFYAGLLALCDCRLHAQNEPKPLPPVAVLPTGQL
                     AGQTIAVLPLTLVAADPNLESDSVYAPYREHRTALLRADSLIADGVRNRGPEVTWI"
BASE COUNT          605 a          953 c          922 g          481 t
ORIGIN      
        1 accgcagcca acagttgatt actgatgccg aagagtggcc agagcgaatt gatgccaccc
       61 agaggatcct gcactccctg caccaggaaa tagccccagc ccgcaaccac cagcgccgag
      121 gcgagtaggg tgctgggata ccacgaagta cggccgagcg ggcgccacac gtggccggcc
      181 agctcctgaa gcatgaatcg gcccacacgg gttccggtat ccacggtagt gagaatgaag
      241 agcgcctcga acatgatggc gaagtggtac cacagcgcca tcagtccggc gccaaatgcg
      301 ctgctgaaga tgtgtgccat gccaaccgca agcgacggag caccacctgt ccggcccagc
      361 agcgtctttt ctccgaccga cgcggccaag ctctggatct ggtcaggcgt taccgtgaac
      421 ccccagccgc gaatcacctc ggccgccgat tgcacgctgc cgccaagcga agtgatcggg
      481 gcattgatcg cgaagtagat gccgggatcg agcagcgccg ccgcgcagag tgccatgatc
      541 gccacgaacg attccatcag catgccgcca tatccgatca accgggcatc gctctcacga
      601 accagcatct tgggcgtggt gccggaggcg accagcgcgt ggaacccgct gatggcgcca
      661 cacgccaccg tgatgaaggc aaaaggaaaa agcttgcctg cgaacaccgg accggtgcca
      721 tcgacgaacc gggtgactgc cggcagcttc agtggcggca agaccaggag gattcccagc
      781 gcgagcagca ggatcgtccc gatcttcata aaggtcgaga gatagtcgcg ggggcagagc
      841 agcatccaga ccggcaacac gctggcaatg aagccgtagg caatcatggc ataagcgatg
      901 gtgagcccgg atgcgctgaa gtacggcgcc agcatggtgg attgggagac gtagcgtccc
      961 ccgaccaggg ccagtaggag aagcaggatt ccaatcgccg atgcttccaa cgtccggccc
     1021 gggcgccagg ccttcatcca gaaccccatc agtaccgcaa tgggaatggt gcagaggatc
     1081 gtgaagactc cccacgggct gtccttcaag gcatttacca ccaccagcgc gagcaccgcc
     1141 agcaaaatga tcatgatcgc cagaatggcg atcatcgcga gcaggccagt gaaggggccg
     1201 gtttcctcct tggccatctg gccgagcgac ttgccatcgc ggcgcatgga gccgaacagg
     1261 atgatgaagt cctgtaccgc accgccaaac acgaccccga acacgagcca aagcgtgccg
     1321 ggcaggtagc cgaactgcgc ggcgagcacc ggtcctacca gcggtccggc tccggcaatg
     1381 gcggcaaagt ggtgcccgaa caggacccag cgcgaggtgg ggacgtagtc ccgtccgttc
     1441 tgcaaccgct ccgccggagt agcccggcga tcgttcaggc caaagacttt gaacgccaga
     1501 aatcggctgt aaaaccgata ggccaggagg taggtcccga ccgcggcgag aaccagccag
     1561 gcggcgctga cggtctcacc ccggtgaagc gccagcactg cccacgcgac ggcgccgaga
     1621 atcgccagca ccagccactt aaaattcttg aggagcatgg ctggaaagct aaaagatgag
     1681 aggtgagagg taagaggctt ttccgacctt gccactcccc aattcggctc gtagcttcga
     1741 attctcatgc cattgccatc cttcggcttc ggtcaccggc cctcgtggga atacgaggca
     1801 ccggaagggg ccggtgccgc gctcgaggag ccccgccccc agccgatcac ccgaggctgg
     1861 cgcggcaagg cggcggtcat taccggcgga gccaccggcc tgggccggca tatctgcatg
     1921 gagttcgccc ggctggggtg ccacgtcgct ttttgcttcg tgaacatgcc cgggagggat
     1981 gtcagcgagc aggcgctgct gaccgagacc gccctcagtg ccatgggcgt tcaggtccac
     2041 gttcggcgct gtgatgttcg cgaccgcgat gcggtagagc actttatccg ggaaaccaag
     2101 gagcggctgg gcggcctcca ctttctcgtc aacaacgccg gcatcgcgaa cgatggcgcg
     2161 ctctggcggt tgacccgcga ggcctggagc gacgtgctgg acaccaatgt caccggcgcg
     2221 ttcaactgca tccgcgcggt cgcgccgatc tttcgcgctc agcactatgg gaagatcgtg
     2281 agcgtaagtg ctcatcaggc cgaccgcccc ggcttcggtg tcgccaatta cgcggccagc
     2341 aaagcggccc tccagggcct tacccgggcc gcggcagtcg agctggggcc ggccaatgtc
     2401 aacgtgaacg cggtggcacc cggattcatt cgcaccgagc gaatggccat gcttccatcg
     2461 gaggtcatcg agcgagccca gaagagctcg gtgctcgggc gagtggcgga accggatgac
     2521 gtagcgcacg tcatctcatt tctctgctcc gagtcggctc gccacatcac cgggcaaatc
     2581 atcgtggtgg atggaggtct ctcgctggag tagaagagag cgactggttt acgctgttcg
     2641 ccttcccgtt tacgtttttg catgccttcc atctcccgaa gagttgttcc cccgttttat
     2701 gcgggccttt tggcgctgtg cgactgtcga ctgcacgcgc agaacgaacc caaaccgcta
     2761 ccgcccgttg ccgtgcttcc caccggtcag ctcgccggcc agaccatcgc agtcctcccg
     2821 ctgacgctcg tggcggctga ccccaatctc gaatctgact cggtctacgc gccgtaccgg
     2881 gagcaccgga ccgctctgct ccgggcagac tcgctcattg ccgacggggt ccggaaccgt
     2941 ggtccggaag tcacctggat t
//
LOCUS       DASRPQ010000768         2221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2610466, whole genome shotgun sequence.
ACCESSION   DASRPQ010000768 DASRPQ010000000
VERSION     DASRPQ010000768.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2610466"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..736)
                     /locus_tag="VFD73_08860"
     CDS             complement(<1..736)
                     /locus_tag="VFD73_08860"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HZI74114.1"
                     /translation="MTERWYEKAIVYCLDVETFQDSNGDGVGDFPGLTRRLDYLARLG
                     VDCLWLNPIHPSPGRDGGYEVSDYYNVHPRLGTLGDFAEFLQAADSRGIRVIIDLVVN
                     HTSDEHPWFRSACSSPDSPYRDWYVWSEQEPPDRFQGMVFPGEQDETWTYEETAKAWY
                     YHRFYRFQPDLNISNPRVRDEIKKIASFWLRLGVAGFRMDAVPFLIEYTTPDGSGDDK
                     DFGFLTDLRQCVQWQRQDALLLAEANV"
     gene            1112..2014
                     /locus_tag="VFD73_08865"
     CDS             1112..2014
                     /locus_tag="VFD73_08865"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HZI74115.1"
                     /translation="MPRSYGHLTGEQAEHFLERGFVTVRRAFEPADAQQWLDNAWIRF
                     GYDRHDPASWAEKRIHLLSRSHVDARTFAPAAWGAAMDLVGGESRVTLPWQWGDGFIA
                     NLGVGDDRPWQSPSRLAGGWHKDGDFFRHFLDSAEQALLTFVLWTDMLHKGGGTFVAA
                     DSVPVVARFLAEHPEGVLPEEFDYAELIAQCHDFVEMTGEAGDVVLLHPYTLHATSQN
                     VLGVCRIITNPPLALRQPMNFGRPHVDDFSLVEQAVLRGLGVDRLDFIPTAPRENVVP
                     ERVRRQQARAITENARLAAVKRTT"
BASE COUNT          383 a          666 c          746 g          426 t
ORIGIN      
        1 cgacgttcgc ctcggctagc agcagcgcgt cctgacgctg ccactgaaca cactggcgga
       61 ggtcggtcag gaatccgaag tccttgtcat cgccgctccc gtccggagtg gtgtactcga
      121 tgaggaacgg caccgcgtcc atccggaacc cggctacccc tagccggagc cagaatgacg
      181 cgatcttctt aatctcgtcg cgcacccgtg gattgctgat gttgagatca ggctgaaaac
      241 gataaaaacg gtggtaatac caggccttcg ctgtctcttc gtacgtccaa gtctcatcct
      301 gctcgccggg gaagaccatg ccctggaacc tgtcgggcgg ctcctgttcc gaccagacat
      361 accagtcccg gtacggcgag tcgggcgacg agcacgctga ccggaaccac gggtgctcgt
      421 cagacgtatg gttaacaacc aaatcgatga tgacccggat gccgcggctg tcagccgcct
      481 gcaagaactc cgcaaagtcc cccagcgttc ccagccgagg gtgcacgttg taatagtcgc
      541 tgacttcgta gccgccgtcc cggccagggg agggatggat agggtttagc cacaggcagt
      601 cgacgccgag ccgggcgagg tagtccagtc ggcgagtgag cccggggaag tccccgacgc
      661 cgtcgccgtt ggaatcctgg aatgtctcca cgtccaggca atagacgatt gccttctcat
      721 accagcgctc agtcatgtgg ctccactctc cccatggcag ccgcagcaaa acgcaccccg
      781 gggtggctat gacgaaccgt tcttgggact ggcctgacgg cttgctgccg ccccacctga
      841 gcgttggcca tcatcgtcga ctttggccgc actcctgcgc gcctcgtcac tgggctgccg
      901 ccgagttggc cggtgagctg gcccgggctc accttctggc tttcgctgtg tacgtggccg
      961 cgacccgtgc caagcggtgc cctccctccc ggcgcaagtc gtgcaatagc aggccatgac
     1021 atgatgaaag tcatggcaag acagtgacgc gcaccgcgcc atggcctgag ggagacctgc
     1081 cgtctcaggc cccattcagg gaggagatcg cgtgccgagg agctatgggc acctgaccgg
     1141 cgaacaggcc gagcatttcc tggagcgagg tttcgtgacg gtgcggcgtg ccttcgagcc
     1201 tgctgacgca cagcagtggc tggacaatgc gtggatccgc ttcgggtatg accgtcatga
     1261 tccggcgagc tgggcggaaa agcggatcca tctgttgtca cgttcgcatg tggacgccag
     1321 gacgtttgcg cctgccgcct ggggcgcggc catggatctg gtcggcggcg agagtcgagt
     1381 cacgctgcct tggcagtggg gcgacggttt catcgctaat ctcggggtgg gtgacgatcg
     1441 gccgtggcag tcgccgtcac gattggccgg aggatggcac aaggacggtg atttctttcg
     1501 gcatttcctg gattcggcag agcaggcgct gctgactttc gtgctgtgga cggacatgct
     1561 gcacaaaggc gggggcacgt tcgtggcggc tgattcggtg ccggtggtgg ctcgcttcct
     1621 cgccgagcac cccgaggggg tcctgccaga ggagtttgat tacgccgagt tgatcgcaca
     1681 gtgccacgac ttcgtggaga tgactggcga ggccggtgac gtggtgctgt tgcatccgta
     1741 cacgctgcac gccacgtcgc agaatgtcct cggtgtttgc cggatcatca cgaacccgcc
     1801 gttggcactg cgccaaccga tgaacttcgg tcggccgcac gtagatgact tttccctggt
     1861 ggagcaggca gttctgcgtg ggctgggcgt cgatcgtctt gacttcattc cgaccgcgcc
     1921 gcgggagaac gtagtccccg agcgggtacg gcggcagcag gcgcgggcga tcacggaaaa
     1981 tgcgcggctg gccgctgtca aacgcacgac atagaacggc ggagggtcag cgctgaccgg
     2041 aatggtgagc catagcggcg ttatccgggg ctcatcggaa cctgggttcc gcagctgcgt
     2101 agcgcgctga tcggcggatg tgggctctga cgtgcgggaa tgcaccctcg cctaggcgga
     2161 gggcgtgtat ctaggggtcg cgtttgtgct ggtcagccgg ttgcggcgag gatgagctgg
     2221 t
//
LOCUS       DASRPQ010000769         1038 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1977945, whole genome shotgun sequence.
ACCESSION   DASRPQ010000769 DASRPQ010000000
VERSION     DASRPQ010000769.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1977945"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..580
                     /locus_tag="VFD73_08870"
     CDS             <1..580
                     /locus_tag="VFD73_08870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74116.1"
                     /translation="GTSPYYAEFQPYIDGDSTLLGHVLLDDIGNLSSLTQAQLDTIAA
                     HSKRRFPGLLTVVRGRPTQLKAAAPRCRSCLGGKQPYGFLDAGWAQYSVKNGDAASFR
                     DAEIAAATELQLGLVLGINIRRPFLSPNMNEAPIDSVSQWGKILLATGTSDYACAFSL
                     WNDTYSSAAAAAVFDTLALLARNHVASPCKRR"
     gene            complement(593..>1038)
                     /locus_tag="VFD73_08875"
     CDS             complement(593..>1038)
                     /locus_tag="VFD73_08875"
                     /inference="COORDINATES: protein motif:HMM:NF015378.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HZI74117.1"
                     /translation="PRVTQLQNAVAQAKVSLRESVVAGQASVSGGRAVRAALLVDAAP
                     QYSVGTLGNGTLHDVRLDIVSGAVIASSILGASADPCPGAIGVDQAIAIAESRANGTA
                     VSVQPDDDDHCLQEVQVLSGAVLWEVKVAREGTVLEVEKSDADGN"
BASE COUNT          178 a          361 c          308 g          191 t
ORIGIN      
        1 cggcacctca ccgtactatg ccgagtttca accttacatc gatggcgaca gcacgcttct
       61 gggccacgtg ctgctggatg acatcggcaa tctgagctca ctcactcagg cgcagctgga
      121 tacgatcgcc gcccacagca aacggcgatt ccccggcctt ctcaccgtgg tgcggggccg
      181 gcccactcag ctcaaggcgg cagccccgcg ttgccgcagc tgcctgggcg gcaagcagcc
      241 gtatggattt ctcgatgcgg ggtgggcgca gtattcggtc aagaatggag acgcggcttc
      301 gttccgggac gccgagatcg cggcagcgac tgagcttcaa cttggattgg tgctggggat
      361 caacattcgc aggcccttcc tgtcgcccaa catgaacgag gcgccgatcg acagcgtttc
      421 gcagtggggc aagatcctgc ttgccaccgg cacctccgac tatgcctgcg ccttcagttt
      481 atggaatgac acctacagct cggctgccgc cgcagcagtg ttcgacactc tggcactgct
      541 cgccaggaac cacgtcgcct cgccctgcaa gcgtcgctag gctcgaccgc tcctagtttc
      601 cgtcggcgtc agacttttcc acctcgagca cggttccttc ccgggccact ttcacttccc
      661 acagcacagc gccggagagc acctgcacct cctgcaggca atggtcatca tcgtccggct
      721 ggaccgagac tgcggtgccg ttcgcccgtg actctgcgat cgcaatcgcc tgatccaccc
      781 cgatggcacc cggacaggga tcagccgagg cacccaggat gctggaggca atcacggcac
      841 cgctcacgat atccagccgg acgtcgtgca gcgttccatt cccgagagtg ccgactgagt
      901 actggggagc ggcgtccacc aggagggcgg ccctgacggc tctcccgccg ctcacgctgg
      961 cctggccggc taccaccgat tcccggagtg agactttcgc ctgcgcgacg gcgttctgca
     1021 gctgggtgac ccgcggtc
//
LOCUS       DASRPQ010000770         1017 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_406441, whole genome shotgun sequence.
ACCESSION   DASRPQ010000770 DASRPQ010000000
VERSION     DASRPQ010000770.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_406441"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            241..>1017
                     /locus_tag="VFD73_08880"
     CDS             241..>1017
                     /locus_tag="VFD73_08880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74118.1"
                     /translation="MGPLTLVSAPAGFGKTTLLAQWLAESGMSAAWLSLEPGDNELVR
                     FLSYLIAAFQTLDPHLGIGALTLLQMPPPAAAETVLTLLTNDVGSHGRDGGDLVLVLD
                     DYHVLDAQPIDQALTYLVEHLPPHMHLVIATREDPPLPLARLRAGGHLTEVRAADLRF
                     TLSEAAAFLTQVMGLTLEAQDIAALEMRTEGWIVGLQLAALSLQGQPDAAGFITSFTG
                     SHHFVLDYLVEEVLGQQDARLQTFLLRTSILERMTGPLCDA"
BASE COUNT          182 a          358 c          282 g          195 t
ORIGIN      
        1 aagtccgaga ccctcacgct ggcgcactta caggccgtgg cccaggcact ggctgctgct
       61 ctcatcgaaa ctgcgcctga cacagatgcg gacgaggctc gcccctcgga gaaaggcaaa
      121 gcacctggga tggggagtga ttcactcacc cctctgctcg caaccaagct ccatcggccc
      181 ctgccacgcg cacacctcgt gcgccgcccc cagctggctg cacgactcac gcagggagtg
      241 atgggtccgc tcacgctcgt ctcggcaccc gcaggctttg ggaaaacaac cctgctcgcg
      301 cagtggctcg ccgaaagcgg catgtctgcc gcctggctct cactcgaacc gggggacaac
      361 gagctggtgc gcttcctctc gtatctcatt gccgccttcc agacgcttga cccacatctc
      421 gggattgggg ccttgaccct gctacagatg ccaccgcctg cggcagcaga gaccgtgctc
      481 acgctgctca ccaacgacgt gggaagtcat gggcgtgacg gaggagattt ggtcctcgtc
      541 ctggacgact accatgtgct tgatgcccaa ccgattgacc aggccctcac gtatctcgtc
      601 gagcacctgc caccccacat gcacctggtc atcgccaccc gtgaagatcc gccgctccct
      661 ctcgcccgct tacgcgccgg gggccatttg accgaagtgc gtgccgctga tttgcggttt
      721 accctctccg aagccgccgc ctttctcacc caggtgatgg gtctcaccct cgaagctcaa
      781 gacatcgccg cgctggaaat gcgtaccgaa ggctggattg tcggactgca attagccgcg
      841 ctttccttgc agggacagcc agacgccgcc ggcttcatca cctcgttcac cggcagccac
      901 catttcgtgc tggattatct ggtggaagaa gtcctcgggc agcaggatgc tcggctccag
      961 acgttcttgc tgcgcacctc catcctcgaa cgaatgacag gcccgctgtg tgatgct
//
LOCUS       DASRPQ010000771         1236 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3855899, whole genome shotgun sequence.
ACCESSION   DASRPQ010000771 DASRPQ010000000
VERSION     DASRPQ010000771.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1236
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3855899"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(140..>1236)
                     /gene="ribD"
                     /locus_tag="VFD73_08885"
     CDS             complement(140..>1236)
                     /gene="ribD"
                     /locus_tag="VFD73_08885"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: protein motif:HMM:TIGR00326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HZI74119.1"
                     /translation="FDRFAMNRALVLASRGLETTHPNPRVGCVIAQGTKVIGEGWHER
                     AGEAHAEVNALAAVRSAGLQSAGTTAYVTLEPCSHYGRTPPCTDALISAGVSRVVYAV
                     QDPNPEVSGRGDELLRQAGIAVESGLMEAEAVDLNIGYMKRRTYGRPWVRLKLAMSLD
                     GRTALANGASQWITGEAARNDVQHWRARSSAVMTGVGTVLADDPRLDVRLPPEKPEDE
                     PWQPLRVVLDTRLRTPTDSRLFTTGGEVLILTEDATRGATLAGMGVAVEAIPASHGRL
                     DLVAVIDRMGELEVNELLVEAGPTLSGEMLRQGLVDELLLYVAPKLLGPQGLPLVDLP
                     ELGDLQDALGFTVAGVQRLEDDLRLRLRPR"
BASE COUNT          247 a          442 c          342 g          205 t
ORIGIN      
        1 cgatgcggaa atcactcgaa cgaagctgat tgaatgctat gacgatgcgc gcatcgcccc
       61 cgcgattctc gcgagcactg accctaccaa catcctgcac gattcccgta aacatatgat
      121 tcagggctcc gcccgtgcct caacgcggcc gcagccgcaa acgcaaatca tcttccaacc
      181 gctgcactcc ggcgacagtg aagcctagcg catcctgcaa atcacccagc tcaggcaaat
      241 caaccagcgg cagcccctgc gggcccagca gcttgggcgc cacatatagc aacagctcgt
      301 cgaccaaccc ttgccgcaac atctctccgg agagtgtcgg gccagcttcc accagcaact
      361 cgttcacctc gagctcgccc atccggtcaa tcaccgcgac cagatccagg cggccatggg
      421 aggctgggat cgcctccaca gcgacgccca tcccggcgag agtggctccg cgcgtggcgt
      481 cctcagtcag aatcaacacc tcaccgccgg tcgtgaacag gcgcgagtcg gtaggcgtac
      541 gcaaccgggt atcgagcacc acacgtagcg gctgccaggg ctcatcttcc ggtttctcgg
      601 gcggcaacct gacatcgagc cgagggtcgt ccgccagcac agtcccaact ccggtcataa
      661 cggcggaact gcgcgcgcgc caatgctgca catcgtttcg tgctgcctca ccggtaatcc
      721 actggctggc cccgttcgcg agcgccgtgc gaccgtccag gctcatggcg agcttgagtc
      781 gcacccatgg cctgccgtag gtccgccgtt tcatgtaccc gatgttcaga tccactgcct
      841 cggcctccat caggccggac tccacggcaa tgcccgcctg gcgcagcagc tcgtcgcccc
      901 gaccgctgac ttccgggttg ggatcctgaa cggcgtagac cacgcgggaa acaccagcgg
      961 aaataagggc gtcagtgcac ggaggcgttc ggccgtagtg actacatggc tccagcgtca
     1021 cataagcggt ggtaccggca gactgcagcc cagcagaccg cactgcagcc aacgcattca
     1081 cctctgcatg agcttctcca gcccgctcgt gccacccctc gccgatgacc ttcgtaccct
     1141 gcgcaatcac acatcccaca cgcgggttgg gatgtgttgt ctcgaggccg cgcgatgcca
     1201 acacgagggc gcggttcatg gcgaagcgat cgaagt
//
LOCUS       DASRPQ010000772         1280 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_406549, whole genome shotgun sequence.
ACCESSION   DASRPQ010000772 DASRPQ010000000
VERSION     DASRPQ010000772.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1280
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_406549"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(261..638)
                     /locus_tag="VFD73_08890"
     CDS             complement(261..638)
                     /locus_tag="VFD73_08890"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI74120.1"
                     /translation="MLPRASGPTSGWRILVTDDNPRKLYALTEILRNAGHCVFAAYDG
                     ESALELVTLLPDLHLLIANTRLGAVDGPELMSRTRALKPTLPILHVGHNQESDNGLPA
                     GVPTLHEPFTPNELLAVIGSLVI"
     gene            944..>1280
                     /locus_tag="VFD73_08895"
     CDS             944..>1280
                     /locus_tag="VFD73_08895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HZI74121.1"
                     /translation="MPESQFRKSEVPAEAEAAREHQAGLTTLPDYSTAIVATVREPLV
                     LLDAGLRVLVANAAFYRTFGGHPSDTRRRSIFDLSEGRWDAPGLHAVLQALQEHGVAF
                     ENYEVPVIIE"
BASE COUNT          237 a          415 c          390 g          238 t
ORIGIN      
        1 gccaaccact gatacacttc cgctaggcct agcacttcac tggtagctac cgcgttcgga
       61 tcgctgccat ttagctcatt atgacccgca gccgttcacg gccgagaagc tgcgagcggc
      121 ggtcaacgcc atgctggacg cccagggaaa cggcaagggc cagctagcca gccccctcgg
      181 tgcgcagctt ggttggttcc ttgtgtcgca gacatcggaa aactctacgt cgacgtcctg
      241 aacaccctcg cttgaatgtc tcagatgacg agcgatccaa tcacagccag cagctcgttg
      301 ggcgtgaagg gctcgtggag agtgggtacg cccgccggca gaccgttgtc ggactcttga
      361 ttgtgcccca catgcagtat gggtagggtc ggtttcagcg cacgggttcg gctcatcaac
      421 tcgggcccat cgaccgcccc gaggcgggtg ttggcgatga ggagatgaag atcaggcagc
      481 agcgtgacca gctcgagagc cgattccccg tcatacgccg caaagacgca atgcccagcg
      541 ttgcgcagga tttccgtgag cgcgtagagt ttcctgggat tgtcgtcggt taccaagatg
      601 cgccagccgc tggtggggcc ggacgctcgg ggtagcattg tgttccttgg acccgacgag
      661 acatgccggg ggaggcagga agtactgcag ataggcgtaa gctacctcaa gggcgctaaa
      721 ctctcaaccg gctgccctac ctcggcgcat ggtcacggag cacccatggt cgccgaccat
      781 tcgccgacct tccgacgccc gccagcctcg gctagctttt tgtgggtccg tcactgccgt
      841 gggaccggct gccaggccgc gtcccgctgc cgtccacctc tatcgacgcg tcttttccaa
      901 gcaaaccagc cggccatcca gaccgaccag ggctagcgaa ggcatgccag aatcccaatt
      961 ccgcaagtcg gaagtccccg ctgaggccga agcagcgcgc gagcaccaag caggcctgac
     1021 aaccctcccc gattacagta ccgcgatcgt tgcaacggtc cgcgagcccc tcgtcctcct
     1081 ggacgctggc ctccgcgtcc tagtcgcgaa cgcggcgttt tatcgtactt tcggcgggca
     1141 cccctcggat acccgtcggc gctcgatttt cgacctctct gaggggcggt gggacgcacc
     1201 gggcttacac gcagtgctcc aggcgcttca ggagcacggt gtcgccttcg agaattacga
     1261 ggtgccggtg atcatcgagg
//
LOCUS       DASRPQ010000773         1419 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1344497, whole genome shotgun sequence.
ACCESSION   DASRPQ010000773 DASRPQ010000000
VERSION     DASRPQ010000773.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1419
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1344497"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1253)
                     /locus_tag="VFD73_08900"
     CDS             complement(<1..1253)
                     /locus_tag="VFD73_08900"
                     /inference="COORDINATES: protein motif:HMM:NF013124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043531 - ADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NB-ARC domain-containing protein"
                     /protein_id="HZI74122.1"
                     /translation="MAAIKETGSVVGIYAIDGMAGVGKSAFAVHAAHVLAPRFPDGQI
                     FLQLHAHTGGHQPVDAADALASLLLTSGVAAEQIPAALGDRSSLWRSHLAGRRVLLLL
                     DDAESHEQVEPLLPGTPGSLALITSRRHLSALDDAVSICLETLPPDEAAALLIRLAGR
                     RDLDGADPAVEKINQLCGHLPLAIGMLARQLHHHPAWSAAGLARELAAARDRLELMEL
                     MHAENLSVAAAFDLSYQDLTAGQQRLFRRLGLHPGTDIDAYAAAALDGSSLAASRRGL
                     DELFDQHLVTEPASGRYRMHDLIREYARTLVKTDAPEDGESAIVRLTDFYVSASAVIG
                     RHFNRGHPAAIESLAPVGIPEMLTREEAASWMEAERANMHAIVDYAAARRWPAPGIVI
                     STAMSGFLSSRGHWTQMRVLHVTAL"
BASE COUNT          284 a          450 c          457 g          228 t
ORIGIN      
        1 tctagggctg tgacatgcag gacgcgcatc tgcgtccagt ggccacggga actcaggaac
       61 ccgctcatgg cagtggagat cacgatcccc ggtgctggcc acctgcgtgc ggcggcatag
      121 tcaacgatcg cgtgcatatt agcccgctcg gcttccatcc acgaagcagc ctcctcgcgg
      181 gtcagcattt ccgggattcc aaccggtgcc agtgattcaa tggctgctgg gtgaccgcgg
      241 ttgaagtgtc ggcctatgac ggcggaagca ctcacgtaaa agtcggtcag ccggacgatc
      301 gcggactcac cgtcctcggg agcgtcggtc ttaacaaggg tccgagcata ctcgcggatc
      361 agatcatgca tgcgataacg gccgcttgcc ggttcggtca ccagatgctg gtcgaaaagc
      421 tcatcaagac cgcgacggga agccgcgagg ctggagccgt cgagagcggc ggcggcataa
      481 gcatcaatgt ctgtcccagg atgcagaccg aggcggcgga acagccgttg ctggccagca
      541 gtgagatctt gatacgagag atcgaaagca gctgcaaccg atagattctc ggcatgcatc
      601 aattccatca actcgagccg gtcacgggcc gcggctagct cacgcgccag cccagccgcc
      661 gaccaggccg gatggtggtg caactgacgg gccagcatcc caattgccag cggaagatga
      721 ccacatagct ggttgatctt ctcgaccgct ggatccgcgc cgtcaaggtc acgacgacca
      781 gcgagccgga tcagcagcgc agccgcctca tccggcggca acgtctccag gcatattgag
      841 acagcatcgt cgagcgcgct aaggtgccgg cggctggtaa tcagggctag gctccccggg
      901 gttcccggaa ggagcggctc gacctgctcg tgactttctg cgtcgtctag gaggagcaaa
      961 acccgcctgc ccgccagatg agaacgccac agggacgagc gatcacccag cgctgccggg
     1021 atctgctcag cggcgacccc agaggtgagt agcaggctgg ccagcgcatc agccgcgtca
     1081 acgggctggt gaccgcccgt atgggcgtgc agttgcagga agatctggcc gtccggaaat
     1141 cggggcgcaa gaacatgggc ggcgtggact gcgaacgcgc tcttgccgac cccggccata
     1201 ccgtcgatcg catagatgcc gacgacgctg ccagtttcct taatggcggc cataagcttc
     1261 gccaggtggg cctcacgacc cgtaaaactt ctgatgtcac gcggtagcac gggagtggta
     1321 gcagctaccg acctggcgcg cgcgcgaggc cgagccaaca accccggctc cgcgtcgcgg
     1381 tagccgcgcg ctgccgtctc gaaccccgcc cgagccgtg
//
LOCUS       DASRPQ010000774         1407 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3856084, whole genome shotgun sequence.
ACCESSION   DASRPQ010000774 DASRPQ010000000
VERSION     DASRPQ010000774.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1407
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3856084"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1105)
                     /locus_tag="VFD73_08905"
     CDS             complement(<1..1105)
                     /locus_tag="VFD73_08905"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HZI74123.1"
                     /translation="MLAVATVTLVASALLGLAFPLVVRYLLDAAFIQQNRTILNRIAV
                     GLVVLFSIQAVLNYAQTYMLSAVGERVVAGLRRELFGKLLEMPPGFFSERRTGELTSR
                     LTTDIGLLQGVLSHQIAEFSRQVLALAGGIILLTLMQPRLTLTALGVVPLVVGSAFYF
                     GRRLRRMTVGVQDKVAEATAVAEEAFSQIRTVQSFVQEPSERERYGERIADSVKAALV
                     RARLRGVFFGVLTFATFVGIVFVLWQGGLLVLDGKLTPGELVQFLLYTITIAAAIGAL
                     ASFFSSYQEAVGAAERVFEILEISPDIADPDHPVTLSTPARGNFAFEGVYFRYQRSPS
                     LPWTLEDIDLRCDPGEVLALVGPSGGGKTTLVSL"
     gene            complement(1197..>1407)
                     /locus_tag="VFD73_08910"
     CDS             complement(1197..>1407)
                     /locus_tag="VFD73_08910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74124.1"
                     /translation="CVRLVRDGATTPVAWRMYRYSLLYLALLFVAMGIDRAIPLGHGT
                     GASPVLILDHPERELATPIGSQHGN"
BASE COUNT          285 a          460 c          447 g          215 t
ORIGIN      
        1 gcagcgacac cagggttgtc ttgcctccac ccgagggccc caccagcgcc aggacttccc
       61 ctggatcaca ccggagatcg atgtcctcca gggtccaggg cagtgagggg cttcgctggt
      121 agcgaaagta cacgccctcg aaagcaaaat ttcctcgcgc cggcgtgctc agagtgaccg
      181 gatggtcggg gtctgcgatg tcgggggata tctccaggat ctcgaagacc cgttcggccg
      241 ctccgaccgc ttcctgatag ctgctgaaga atgacgcgag cgcgccgatc gcggcggcga
      301 tggtgatcgt atacaggagg aactggacca gctcaccagg cgtgagcttc ccatccagaa
      361 ccaggagacc tccctgccag agcacaaaga cgatgcccac gaaagtggca aacgtcagga
      421 ccccgaagaa caccccgcgc agtcgggcac gaaccagggc ggccttgacg ctgtccgcga
      481 tgcgctcgcc ataccgctcc cgctcgctgg gctcctgtac gaagctctgg actgttcgga
      541 tctggctgaa cgcctcttca gccaccgccg tggcttccgc caccttgtcc tgaacgccca
      601 ccgtcatccg acggagccga cggccgaagt agaatgcgga tcccaccacc agcggcacca
      661 ctccgagggc tgtcagcgtc agccgaggct gcatcagcgt gagcagaatg atcccaccgg
      721 cgagcgccag tacctgccgg gaaaactccg cgatctgatg actgagcacg ccttggagca
      781 atccgatatc cgtggtcagg cggctggtaa gctctccggt ccgccgttcg gaaaagaacc
      841 cgggcggcat ctccagcagt ttcccaaaca actctcggcg gagaccggca accacccgct
      901 ctcccaccgc gctcagcatg tacgtctggg cgtagttgag gactgcctgg atgctgaaga
      961 gcaccaccag cccgacggcg atgcgattga gaatcgtgcg gttctgctgg atgaacgcgg
     1021 cgtcgagcag gtagcggacg accaggggaa aggcgagccc gagcagagcg ctggcgacca
     1081 gggtaacggt ggcgactgcc agcataccgc ggtactcccg cacccgcggc cagagacgca
     1141 ccagccggcc gggaggcgga atccgcctga tcgaagatcc tgcgctgtcc gacgtttcag
     1201 ttgccgtgct ggctgccgat tggtgtggca agctcacgct cgggatgatc gagaatcagc
     1261 accggagacg ctccggtgcc gtgtcccagg gggatagccc ggtcaatgcc catggccacg
     1321 aacaagaggg cgagatagag caggctgtag cggtacatgc gccaggcgac cggtgtggtg
     1381 gcgccgtccc gcaccaggcg cacacag
//
LOCUS       DASRPQ010000775         1187 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1658473, whole genome shotgun sequence.
ACCESSION   DASRPQ010000775 DASRPQ010000000
VERSION     DASRPQ010000775.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1187
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1658473"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1151)
                     /locus_tag="VFD73_08915"
     CDS             complement(<1..1151)
                     /locus_tag="VFD73_08915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74125.1"
                     /translation="MTQIPPVGRVVATELKPSTPHQFHFWTARQSPIGIGAIVRVEDA
                     DRVVYGVVTDGLAYSDLASPMYAVIAADSDPVAAGTEPTSRTEIRLYSAAVLRQIPEE
                     PLQPVPLGPVWLASDADVVLALRMDGYTGHARATGIPVGLYAAGGLESPVYLDCDFLL
                     GPEAAHLNITGVSGLATKTSAVEFLLGSIFQTFPSHKGSVAALCFNVKGPDLCFLDQP
                     ANLSEEDQRQYRRLGLPPEPFRDVHYYAPLKADGVNLNTLRTHEALSANTEPLVWGLR
                     EVLDYAEVVLNRDDIDAKADAFIDFLAERVVGREYQDELLRGNPFLVQSFADLEEFFR
                     RIFDFMETLGRGAEVWKTHHLATIRKVRNRLSNISTRSKGLVTDDGVSN"
BASE COUNT          238 a          360 c          364 g          225 t
ORIGIN      
        1 tcgttggaca ctccatcatc ggtcaccagc cccttggatc gagtactgat gttgctcagt
       61 ctgttacgca ccttgcggat ggtagcaagg tgatgagtct tccagacttc ggccccgcgt
      121 cccagcgtct ccatgaaatc gaagatccgg cggaaaaact cttccaggtc ggcaaagctc
      181 tgcaccagaa atggattacc tctcaatagc tcgtcctggt attcccggcc taccacccgc
      241 tccgccagga agtcgatgaa ggcgtccgcc ttggcgtcga tatcatcccg gttgaggacc
      301 acttcagcgt agtcgagcac ctctcggagg ccccagacca ggggctcggt attcgccgac
      361 agggcctcgt gagtcctgag ggtattcaga ttgacgccgt cggccttgag cggcgcatag
      421 tagtggacgt cgcggaacgg ttcgggcggc agtccgagtc ggcgatactg ccgctggtct
      481 tcctcgctca gatttgccgg ctgatccagg aaacagagat cgggcccttt cacgttgaag
      541 cagagagccg caacgctgcc cttatgcgag gggaaagtct gaaagatgct tccgagcagg
      601 aactcgacag cactggtctt ggtggcgagg ccagagacgc cggtgatgtt caggtgggcg
      661 gcttcgggcc ccagaaggaa gtcgcagtcc agatagacgg gagactctag gcccccggcc
      721 gcatagagac ctaccgggat gccggtggcc ctcgcatggc cggtatagcc atccatccga
      781 agcgccagca cgacgtccgc atcactcgca agccagaccg gccccagcgg gacaggctgc
      841 aacggctcct cggggatctg ccgtaggacg gcggcagagt agagccttat ttcggtccgg
      901 ctggtcggtt ccgttccagc ggccaccgga tcggagtcgg ccgcaatgac ggcgtacatc
      961 ggagaggcca agtctgaata ggcgagtcca tcggtgacca ctccgtagac cacgcgatcg
     1021 gcatcttcga ctcgcacgat tgctccaata ccaatcggcg actgccgagc agtccagaag
     1081 tggaattggt ggggggtcga gggcttcagc tcggtggcca ccacccggcc aaccggcggg
     1141 atttgcgtca tgctcaaata tgcctggctc tcaagtaatc ctctaca
//
LOCUS       DASRPQ010000776         1183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4163986, whole genome shotgun sequence.
ACCESSION   DASRPQ010000776 DASRPQ010000000
VERSION     DASRPQ010000776.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4163986"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..278
                     /locus_tag="VFD73_08920"
     CDS             <1..278
                     /locus_tag="VFD73_08920"
                     /inference="COORDINATES: protein motif:HMM:NF024914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI74126.1"
                     /translation="CAPWRDDEHLFAPGADYLIARNGSETRDLLALLLSDPPLARRLA
                     AHGRRTILARHTCAHRVDELLGILGELNGDEAVSAAAETVTGGEVPS"
     gene            275..>1183
                     /locus_tag="VFD73_08925"
     CDS             275..>1183
                     /locus_tag="VFD73_08925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74127.1"
                     /translation="MTAGLDIAFFGSSLVSAYWNGAATYYRGIVRALHERGHRVTFYE
                     PDAYGRQEHRDIADPDWARVVVYSAATEESALRAVEEARGADLVVKASGIGIFDTLLE
                     RAVLDLQRPETLVVFWDVDAPATLDRIEQDPTDPFLPLIPQYDLVLTYGGGDPVVRAY
                     QAKGARACVPVYNALDPSTHHPVPPDPRFGGDLGFLGNRLPDREARVEEFFLAAAAAL
                     PEKRFLLGGSGWGDKHLPANVHYVGHVYTKDHNAFNCSPMAVLNVNRESMARYGFSPP
                     TRVFEAAGAAACLITDDWVGIELFLEP"
BASE COUNT          203 a          354 c          390 g          236 t
ORIGIN      
        1 tctgtgcacc ctggcgcgat gacgagcatc tgttcgcccc aggagcggac tacctcattg
       61 ctcgcaacgg cagcgagacg cgagatcttc tggcactgtt gctctcagac cctcctctgg
      121 cccggaggct ggccgcacac ggccgtcgga ccatcctggc gcgacatacc tgtgctcacc
      181 gcgtggacga gttgctgggc attctgggag aactgaatgg cgacgaggca gtttcggctg
      241 cggcggagac tgtaactggc ggggaggttc cttcatgacg gcagggctgg atattgcctt
      301 cttcggttcg agcttggtct cggcgtactg gaatggagcg gcgacatact atcgcggcat
      361 cgttcgcgcg ctccacgagc ggggacatcg ggtcaccttt tatgagccag acgcctacgg
      421 ccgacaggag caccgtgata tcgcggatcc ggactgggcc cgcgtggtgg tctattccgc
      481 tgcgacggaa gagtcggcac ttcgagcagt agaagaggcg cgcggtgcag acctggtggt
      541 caaagccagt gggatcggaa ttttcgatac cctgctggag cgggcggtcc tggatctcca
      601 acgcccggag acgctcgtcg tgttctggga tgtggatgcc ccagcgacgc tcgaccggat
      661 cgagcaagac cccaccgacc catttcttcc tttgatcccc cagtacgacc tggtgctcac
      721 atatggtggc ggggatccgg tcgtccgggc gtatcaggcg aaaggcgccc gggcttgcgt
      781 gccagtctac aatgcgttgg atccctcgac ccatcatccg gtgccgcctg atccacgctt
      841 cggtggcgat ctcggctttc tggggaaccg gctgcccgac agagaggccc gggtagagga
      901 gttcttcctg gccgctgcag ccgcattgcc ggagaagcgc ttcttgttag gcgggagtgg
      961 gtggggagac aagcacctgc ctgccaacgt tcactatgtg gggcacgtgt acactaaaga
     1021 ccacaacgcg ttcaactgca gcccaatggc ggtgctgaac gtgaatcgcg agagcatggc
     1081 gcgctacggc ttctcgcctc cgactcgagt gttcgaggcc gccggtgccg ccgcgtgcct
     1141 catcaccgat gattgggtgg gcatcgagtt gttcctggaa ccg
//
LOCUS       DASRPQ010000777         2051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4164261, whole genome shotgun sequence.
ACCESSION   DASRPQ010000777 DASRPQ010000000
VERSION     DASRPQ010000777.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2051
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4164261"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..873)
                     /locus_tag="VFD73_08930"
     CDS             complement(<1..873)
                     /locus_tag="VFD73_08930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74128.1"
                     /translation="MLLLTTTPVHAQGSSDLEESRRRLEEIRAERDRLERQRERLQGQ
                     VHDVHDELSNLERQRESTQRIVSEIERQIGGLASQLDRSSAELILAQDNLAERRAVLE
                     RRLVDIYKRGPLHTFQVLLAAESFGDLLSRYKYLYLTSEQDRALVADVEKLRNRVVQE
                     RNNILDVRGELDRRREEREAEFSKYTQLASERAVKLQSLQRSARSTERRLTQLQKDES
                     RLNGLLAALERSRREELARGALRGAIATPGSITTADLGKLDWPVEGTIVYRFGRDTLP
                     SGGIIRWNGVGIAAP"
     gene            complement(911..1780)
                     /locus_tag="VFD73_08935"
     CDS             complement(911..1780)
                     /locus_tag="VFD73_08935"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HZI74129.1"
                     /translation="MKLLSREALLSFRRAPLLSALSVTTIAFSLFTVGLFGLVAVNLR
                     QALRGLEERVEIVAFVLRGTPSEAIAVASQDISAFPEVQEVNYVSEEEALQRARTELV
                     EFRDAYRDLQVNPLPASLEVRLKEGYRDAASVERVAQRLNGFGFIEDVRYGREWVQKL
                     DYLRNITGLVGLVIGLAFAAVAVVIIGVTIRLTILQRAREISIMRLVGATNWFIRGPF
                     LLEGALKGLLGGLLSLALCYGGYILFRDKSGGTFSGLVFFRPEHMALIIVFGVLLGLC
                     GSLVSVGRHLRHV"
     gene            complement(1777..>2051)
                     /locus_tag="VFD73_08940"
     CDS             complement(1777..>2051)
                     /locus_tag="VFD73_08940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI74130.1"
                     /translation="GGEQQRVAIARALVNDPAILLADEPTGNLDERATRGVFQLLRDI
                     NAGGTVVVMATHDLDLVRQTSYRIIEMRDGSLVYDSEVDEAAAEAQ"
BASE COUNT          384 a          676 c          624 g          367 t
ORIGIN      
        1 gggggcggca atgccgacac cattccaccg gatgataccc ccgctcggca gcgtgtctcg
       61 cccgaaccgg tagacgatgg tgccttccac cggccaatcg agtttcccca gatcggcagt
      121 ggtgatcgac ccgggggtag cgatggcccc gcgcagagcg ccgcgtgcga gctcctcccg
      181 gcgagagcgc tccagcgctg ccagtaatcc gttcaggcgc gactcgtcct tttgcagttg
      241 agtcagccgg cgttcggtgc tccgggccga gcgctgcaag ctctggagct tgacggcgcg
      301 ctccgaggca agctgggtgt acttactgaa ctcggcctcg cgctcttctc ggcggcggtc
      361 cagctcaccc ctgacatcca ggatgttgtt gcgctcctgg actacccggt tgcggagctt
      421 ctcgacatcc gccaccagcg ctcggtcctg ttcgctcgtc agatagagat atttgtagcg
      481 gctcaggagg tcaccgaacg attcggcagc gagcagtacc tgaaaggtgt gcagcggccc
      541 gcgcttgtag atgtctacca gccggcgctc cagcaccgcg cggcgctcgg ccagattatc
      601 ctgggccagg atcagctcgg cactcgagcg gtcgagctga gatgcgaggc cgccgatctg
      661 ccgctcgatc tcactgacga tccgctgggt ggactcgcgc tgtcgctcca ggttgctcaa
      721 ttcatcatgg acatcgtgca cttgcccctg aagccgctcc cgctgtcgct ccaggcgatc
      781 tcgttccgcg cgaatttctt cgagccgacg acgactttcc tccaagtccg agctcccctg
      841 ggcatggacg ggagtcgttg tgagaaggag catcagcagg ctgccgagcg aggcagcaat
      901 agctgcgctt ctacacatgc ctcagatgcc gccccacact caccagactg ccgcagagtc
      961 cgagcaggac accgaagacg atgatcagcg ccatgtgctc aggacggaaa aacaccaggc
     1021 cggaaaacgt cccgccactc ttgtctcgga acaggatgta tccaccgtag cacagcgcca
     1081 gggacagcag gccccccagc agacccttca gggctccttc cagcaggaat ggaccgcgaa
     1141 tgaaccagtt ggtggcaccg accagccgca tgatcgagat ctcccgtgcc cgctggagga
     1201 tggtaagccg gatggtgacc ccgatgatca cgacggcgac ggccgcaaac gccagcccga
     1261 tgacgagccc gactaatccg gtgatgttgc ggaggtaatc gagcttctgc acccactcgc
     1321 ggccgtaacg gacgtcctcg atgaagccaa agccgttgag ccgctgggcc actctttcga
     1381 cgctcgcggc gtcgcgatag ccttccttca gccggacttc gagggaagcg ggaagcgggt
     1441 tgacctggag atcacggtag gcgtcgcgga attccaccaa ttcggtgcga gcccgctgga
     1501 gtgcctcctc ctcgctgacg taattgacct cctgcacctc gggaaaggcg ctaatgtcct
     1561 gactggcgac agcaatggct tccgatggcg tgccgcgcag cacaaaggcg acaatctcca
     1621 ccctttcctc cagtccacgg agcgcctgcc gcaggtttac cgcaaccaat ccgaacaacc
     1681 caacggtgaa gagtgaaaag gcgatcgtcg tgaccgaaag cgcggacagg aggggtgccc
     1741 ggcgaaacga caacagcgcc tcacggctca gcagcttcat tgagcctccg ccgcggcctc
     1801 gtccacttca ctgtcgtata ccaggctgcc gtcgcgcatc tcgatgatgc ggtacgatgt
     1861 ttgacggacg aggtcgaggt cgtgcgtcgc catgaccacc acggtgccgc cggcgttgat
     1921 atccctgagc agctggaaca cgcctcgggt ggctcgctcg tccagattgc cggttggttc
     1981 gtcggccagg agaatggcgg gatcgttcac caacgctcgg gcaatcgcga cccgctgttg
     2041 ttcgcctccc g
//
LOCUS       DASRPQ010000778         3804 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1031559, whole genome shotgun sequence.
ACCESSION   DASRPQ010000778 DASRPQ010000000
VERSION     DASRPQ010000778.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3804
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1031559"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..949
                     /locus_tag="VFD73_08945"
     CDS             <1..949
                     /locus_tag="VFD73_08945"
                     /inference="COORDINATES: protein motif:HMM:NF012379.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HZI74131.1"
                     /translation="SLSLPIPRMRHADALERFGTDKPDLRFGLEIFDATEVFRSAEFS
                     VTRAAIGSGGRVRGIRVPGGARLSRKQLDELEAAAKSLGAAGLLRLKAGDGALEGPAA
                     KFLPPDAAARLGLDHGDLGLFVAGPDRVSNPSLDRLRLETARRMGLIREADNRFVWIV
                     DFPLFEKNPVSGALTSVNHPFTAPHPDDVGLLETAPERARALAYDMVLNGTELGGGSL
                     RIADPSLQRRVFALLGIGEQQAEERFGFLLEGLRAGAPPHGGFAFGLDRIVMLLAQAD
                     SLRDVIAFPKTTAQRALFEGAPTRVDQADLRELHLEIKE"
     gene            1005..1958
                     /locus_tag="VFD73_08950"
     CDS             1005..1958
                     /locus_tag="VFD73_08950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HZI74132.1"
                     /translation="MADDIQTRLSAEGADPLLFAGVNDSNLQELQRALGVRVSFRGEA
                     VTLSGSPEQLERAGPVVQGLIDLARMGEPVTPDDVSRLAAEGSQGELPTQVTDGKIVL
                     PGLRRAIAPKTQGQREYLQAISNHDIVVGIGPAGTGKTYLAVAKAVEALARKRVKRII
                     LARPAVEAGESLGFLPGDLQAKVDPYLRPLYDALEDMMPHDRVQRALETRTIEIAPLA
                     YMRGRTLADAFIILDEAQNATGAQMKMFLTRLGVNSKTVVTGDKTQIDLPQREDSGLI
                     QVERVLPGIEGISFCYLHETDVVRHRLVREIIKAYAEDQSG"
     gene            1958..>3804
                     /locus_tag="VFD73_08955"
     CDS             1958..>3804
                     /locus_tag="VFD73_08955"
                     /inference="COORDINATES: protein motif:HMM:NF019317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDIG domain-containing protein"
                     /protein_id="HZI74133.1"
                     /translation="MARRSQPRVWESWTGVSFRERARFHLSRWAPLFAVAFLTYLAFP
                     PHIGVGTPVPSVGQISKRAVIAPFAFEVRKTPEEIAQEGESRALTAQPVYRFSPTAYD
                     SSLTAARAFFADLERADKAGGPDSVTAVVQAQVRMGPEETKFLTDSTNRRQIQEIFTH
                     FLAEALSKGVADAGAIRGEVSPVIALRRGETERIVPRDSVLTFADLMEQAEAAGINLP
                     TAVGQRTLRRLVGAFYHPTIVVDPLVTASRREQLRGSVDPIKYSVRTGERIVGAGEPI
                     TEEARAKLLTLVAEHERRGTGGLAVRSTVGALLYNTLILSAFWLLIAFYRRESYAHLR
                     EMIFFGALFALVVILTAVIATVVPGRPELVPIPFIAILMTMLYNGWVGVFAAVTLAIL
                     FDGQWALRESNVLFFGIVGGVAGAVGIRVVRRRRHLYVTIGVVAGAGILATIAVGLSQ
                     GWSTSTILGSCLLDLAVALGSAALAMIVMPMAESATRITTDLTLLELSDLGRPLLRRL
                     ALEAPGTWAHSLAMASLCESACNIIGANGLLARVGCYYHDIGKLANPGHFMENQGGAP
                     NPHDLLSPQQSARIIQSHVADGIALAEAAHLPDVVKAFIPEHHGTTYIT"
BASE COUNT          662 a         1207 c         1240 g          695 t
ORIGIN      
        1 ctcactgtcg ctgccaatcc cgcgaatgcg tcacgcggat gctctggaac gctttgggac
       61 ggacaagccg gaccttcggt tcgggctgga gattttcgac gccaccgaag tctttcgaag
      121 cgccgagttt tcggtgacgc gggccgcgat cggatccggc ggccgagtcc gaggcattcg
      181 ggtgcccggc ggcgccaggc tctcccgcaa gcagctggat gagctcgagg cagcggcaaa
      241 atccctgggc gccgcggggc tgcttcgcct caaggcgggg gacggagcac tggagggacc
      301 agcagcgaag tttctgcccc cagacgctgc ggctcggctt ggcctggacc atggcgacct
      361 cggcttgttc gtcgccggtc cggaccgagt gtccaatccc tcgctggacc gactgcggct
      421 ggagaccgct cgccggatgg gcctgatccg agaagccgat aatcgcttcg tctggatcgt
      481 cgattttccg ctgttcgaaa aaaacccagt cagtggtgca ctgacctcgg tcaaccatcc
      541 gtttacggca ccccaccccg atgacgtcgg gttgctggaa acggcccccg agcgagcccg
      601 tgcgctggcc tatgacatgg tgctcaacgg aaccgagctg gggggaggga gtctcagaat
      661 tgccgatccg tcgctgcagc ggcgggtgtt tgcgctgctg ggaatcggcg agcagcaggc
      721 agaggagcgg ttcggcttcc tcctcgaagg gctcagggcc ggcgcaccac cccatggggg
      781 ctttgcgttc gggttggacc gaatcgtcat gttgctggcc caggccgatt cgcttcggga
      841 cgtgattgct tttcccaaga cgacggccca gcgggccctc ttcgagggag ccccgacccg
      901 agtggatcag gcggatctca gggagctcca cctggagata aaggagtgag ctcagacttc
      961 cgccatcccg cttaccgctc acggcccaga gcttagctta gagtatggcc gacgacatcc
     1021 aaaccagact ctccgccgaa ggggcggatc ccttgctgtt tgctggcgtc aacgacagca
     1081 acctgcagga gctgcagcgc gccctgggcg tgagggtttc gttccgggga gaagcggtga
     1141 cgctctcggg ctcgccagag caattggagc gcgccggccc ggtcgtgcag ggcctgatcg
     1201 acctggcgcg catgggggag ccggtaaccc ccgacgatgt ctcccggctg gccgcggaag
     1261 gcagccaggg agagctcccc acccaggtca ccgatggcaa gattgtcctg ccgggtctgc
     1321 gccgtgccat cgctcccaag acccagggtc aacgagaata tcttcaggcc atcagcaacc
     1381 atgacattgt ggtagggatc ggtcccgccg gaacggggaa gacctatctt gccgtggcga
     1441 aggcggtcga ggcgctcgct cgaaagcggg tcaagcggat cattctggcc aggccggcgg
     1501 tcgaagcagg ggagtcgctg ggcttcctac cgggcgacct tcaggccaag gtcgacccct
     1561 acctacggcc gctgtacgat gctctcgaag acatgatgcc gcacgaccgg gtacaacggg
     1621 cactcgaaac tcgaacgatt gaaattgccc cgctggccta catgcgcggc cgcaccctcg
     1681 ccgatgcatt catcatcctc gatgaggcgc agaacgcgac cggcgcgcaa atgaagatgt
     1741 ttcttacccg tctgggggtg aacagcaaaa ccgtggtcac tggcgacaag acccagatcg
     1801 atcttccgca gcgggaggac tccggcctga ttcaggtgga acgagtgctg ccgggaattg
     1861 aaggcatctc gttctgctac ctgcacgaga ccgacgtcgt ccgccatcgg ctggtgcggg
     1921 agatcatcaa ggcctacgcg gaggatcaga gcggctgatg gcgcgacggt cgcagcctcg
     1981 ggtgtgggag agctggactg gcgtctcctt ccgggagcgc gcccgattcc acctttctcg
     2041 ttgggcgccg cttttcgcgg tcgctttcct gacctatctc gcctttccgc cacacatcgg
     2101 cgtaggaaca ccggtgcctt ccgtgggcca gatctcgaag cgcgcagtga tcgcgccatt
     2161 tgccttcgag gtccgcaaga cacctgagga gattgcccag gagggagaat cccgggcgct
     2221 caccgcgcaa ccggtctacc gattcagtcc caccgcctac gattcgtcac tcaccgcggc
     2281 ccgcgcgttc tttgccgatc tcgagagggc ggacaaggcg ggcggccccg actcggtcac
     2341 cgcggtggtc caggcccaag tgcgaatggg tccggaagaa accaaattcc tgaccgactc
     2401 caccaatcga cgacagatcc aggagatctt cacgcacttt ctggccgagg cgctctccaa
     2461 gggcgtggcc gacgcaggtg caattcgggg agaggtcagc ccggtcatcg cgctgcgtcg
     2521 cggcgagacc gagcgcatcg ttccgcgcga ctcggtcctg acgtttgccg atctcatgga
     2581 acaagccgaa gccgccggga tcaaccttcc gacggcggtt ggtcagcgga cgctccggcg
     2641 tctggtgggc gccttctacc acccgacgat tgtcgtcgat ccgctggtga ctgcttcgcg
     2701 cagagagcag ctccggggca gcgtagatcc gatcaagtac tccgtccgca ctggagaacg
     2761 aatcgtcgga gcaggagagc cgatcaccga agaagcccgc gcgaagcttc tgacactcgt
     2821 ggcggagcat gagcggcgtg gcaccggcgg actggcggtc cgcagcaccg tgggcgcgct
     2881 gctctacaat accctcatcc tgagtgcgtt ctggctgctg atcgctttct accggcggga
     2941 gagctacgcg catctgcggg agatgatctt cttcggggcg ctctttgccc tggtcgtcat
     3001 cctgaccgcc gtgatcgcca ccgtcgtgcc cgggcgtccc gaactggtgc cgatcccgtt
     3061 catcgcgatt ctcatgacca tgttgtacaa cggctgggtc ggtgtatttg cagccgtgac
     3121 cctggccatc ctgttcgacg gccagtgggc gctgagggaa agcaacgtgc tgttcttcgg
     3181 gattgtcggt ggcgttgccg gcgcggtcgg catccgggtg gtgcggcggc gtcggcattt
     3241 gtatgtgacc atcggcgtag tggccggggc cggcattctg gcgaccattg ccgtcggcct
     3301 gagccagggc tggtccacca gcacgattct gggaagctgc ctgctggacc ttgccgttgc
     3361 actcggaagt gcggccctgg cgatgatcgt catgccgatg gccgaatcgg ccactcggat
     3421 caccaccgac ctcaccctgc ttgagctgtc ggacctgggc cggccgctgc tccgccgtct
     3481 ggcgctggaa gcgccgggca cctgggcgca cagtctggca atggcgagcc tctgcgagtc
     3541 agcctgcaac atcatcggtg caaatggtct cctggcccgg gttggctgct attaccatga
     3601 catcgggaag ctcgccaatc ccgggcactt catggaaaac cagggcgggg cgcccaatcc
     3661 gcacgacctg ctcagtccgc agcagtcggc ccggatcatt caaagtcacg tggcggatgg
     3721 cattgcactg gcggaggcag cccacctccc tgatgtggtg aaagcgttta tcccggaaca
     3781 tcatgggact acatatatca ccta
//
LOCUS       DASRPQ010000779         1473 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_407477, whole genome shotgun sequence.
ACCESSION   DASRPQ010000779 DASRPQ010000000
VERSION     DASRPQ010000779.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1473)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1473)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1473
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_407477"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(157..1254)
                     /gene="pqqE"
                     /locus_tag="VFD73_08960"
     CDS             complement(157..1254)
                     /gene="pqqE"
                     /locus_tag="VFD73_08960"
                     /inference="COORDINATES: protein motif:HMM:TIGR02109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018149 - peptide cross-linking [Evidence
                     IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqE"
                     /protein_id="HZI74134.1"
                     /translation="MDRPLGLLAELTYACPLHCPYCSNPLNLGDYQEELTTQEWQQVI
                     AEAAELGVLQLHLSGGEPLQRRDLVDIVQFASGHGMYTNLITSASGLSSRRAELLRAA
                     GLDHVQISIQADERALSDRIAGMPSFERKLAAARLVKKLGWPLTLNVVLHRQNIDRIG
                     HILDLAAELGADRIELANTQYYGWAQRNREALLPSRAQLERAEAVVRAARERLRGQME
                     MIYVIPDYYSKYPKPCMGGWGRRQLTVVPNGNVLPCPTAHTLPLPQASVREHSLAWIW
                     QQSPLFQRFRGTDWMPEPCRSCTRRDLDFGGCRCQAFQLTGDATRTDPVCHLSPDHEI
                     VASAVRAASEAVQPREVTLIPRPHPDARRQD"
     gene            complement(1247..>1473)
                     /gene="pqqD"
                     /locus_tag="VFD73_08965"
     CDS             complement(1247..>1473)
                     /gene="pqqD"
                     /locus_tag="VFD73_08965"
                     /inference="COORDINATES: protein motif:HMM:TIGR03859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis peptide
                     chaperone PqqD"
                     /protein_id="HZI74135.1"
                     /translation="SYDQTRQRHVLLTPETVTLLNGTGAAILELCDGMRTVTEILAEL
                     RGRYDRVADAEVRAFLNGLLAKRCVEVSHG"
BASE COUNT          236 a          471 c          509 g          257 t
ORIGIN      
        1 cagaccacgt gagcacagtg tactactgct gggtgcgtga gagaccgttg tccgacaaca
       61 cagtgtccga tacgcactat gagagcgaac gtgtgatctt cttctgctcc ccgcggcatt
      121 ggagcgagta ccaggccctg aggggactgt gacgggtcaa tcctgtcgcc ttgcgtctgg
      181 atgtggccgg gggatgagtg tcacttcacg cggctgtacc gcctcgctag cggcccgcac
      241 cgcgctggcc acgatctcgt gatcgggaga gagatggcag acggggtcgg tgcgcgtggc
      301 atcaccggtg agctggaatg cctggcaccg gcagccaccg aagtcgaggt cgcggcgggt
      361 gcagctccgg catggctccg gcatccagtc cgttccgcgg aagcgctgga agagcggcga
      421 ctgctgccag atccacgcca gcgagtgctc gcgcacgctg gcctggggga gcggaagagt
      481 gtgtgcggtc gggcagggca gcacgttgcc gttgggcacg acggtgagct gccgtcggcc
      541 ccagccgccc atgcagggtt tgggatattt gctgtagtag tcggggatga cgtagatcat
      601 ctccatttgg ccccgcagcc gttcgcgggc cgcgcggacc accgcctccg cgcgctccag
      661 ctgagcccgg ctcggcagca gggcctcccg gttacgctga gcccagccgt agtactgcgt
      721 gttggcgagc tcgatccggt cggcccccag ttccgcggcc aggtccagga tgtggccgat
      781 ccggtcgatg ttttgccggt gcaggaccac attcagcgtg aggggccagc ccagcttctt
      841 caccagccgg gccgccgcta gcttgcgctc gaacgacggc attccggcga tgcggtcaga
      901 cagcgcccgc tcgtcagcct ggatgctgat ctgcacatga tcaaggccag cggcgcgcag
      961 cagctccgca cggcgggacg agaggccgga cgcgctggtg atgaggttcg tgtacatgcc
     1021 gtgtccgctc gcgaactgca cgatatcgac gaggtcgcgg cgttgcagcg gctcaccacc
     1081 ggacaagtga agttgcagca ccccgagttc cgcggcctcg gcgatcactt gctgccactc
     1141 ctgcgtcgtc agctcctcct ggtagtcgcc gaggttgagc gggttggagc agtacgggca
     1201 gtgcagcggg caagcgtagg taagttctgc gagcagcccg agcggcctat ccatggctga
     1261 cctccacgca tcgcttggct agcagtccgt taaggaacgc ccggacctcg gcgtcggcca
     1321 cgcggtcgta acggccacgc aactcggcca ggatctcggt cacggtccgc atcccgtcgc
     1381 acagctccag gatggccgcg ccggtaccgt tcagcagggt gaccgtctcc ggagtcagca
     1441 gcacgtgccg ttgccgggtc tggtcgtacg aca
//
LOCUS       DASRPQ010000780         1148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2285698, whole genome shotgun sequence.
ACCESSION   DASRPQ010000780 DASRPQ010000000
VERSION     DASRPQ010000780.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2285698"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            86..754
                     /locus_tag="VFD73_08970"
     CDS             86..754
                     /locus_tag="VFD73_08970"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HZI74136.1"
                     /translation="MASGSPGNQLDIWDVAWGNLDSLEWCFKEGGDMIAGVLLEPMRD
                     HEPPPGYLHAVQDLCREHGALFIIDEIVTGFRWALGGATEYYGLTPDLACYSKALGNG
                     YPVAAVVGRERHMRFADRVSSTFGGELVGLAAAGAVLGIYTREPVIEHLWKTGRQLMH
                     TLGLVGFPVYPRFPENPRECADQLVTQGILIHPAKGTFCPTYSHSEADVKAVVNAVAN
                     PCAS"
     gene            742..>1148
                     /locus_tag="VFD73_08975"
     CDS             742..>1148
                     /locus_tag="VFD73_08975"
                     /inference="COORDINATES: protein motif:HMM:NF014740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HZI74137.1"
                     /translation="MRVLITGGTGSLGHALVRRWKDSAERIVVFSRDEWKQAEMARVY
                     PEGGAQGIRYFLGDVRDKTRLEQALVGIDTVIHAAALKRVDAVAYNPVEVLKTNVLGT
                     QNVIEAAVSAGVRQVVVVSSDKAVEPSNVYGSS"
BASE COUNT          207 a          330 c          401 g          210 t
ORIGIN      
        1 cggggagtga ggccacgatg ggggccatga tgattgcgcg ggcggcgacg gagcgcatga
       61 agatcgtgag cattgggtat cacggatggc atcagggtca ccagggaacc aactggatat
      121 ctgggacgtg gcgtggggga acctggactc gctggagtgg tgcttcaagg aaggcggcga
      181 catgatcgcc ggggtgctgc tggagcccat gcgggaccac gagcctccgc cgggctatct
      241 gcatgccgtc caagacctgt gtcgggagca cggcgcgctg ttcatcatcg acgagatcgt
      301 cacggggttc cgctgggccc tgggaggagc gacagaatac tatggcctca ctccagatct
      361 tgcctgctac tcgaaggccc tgggcaacgg ttatcctgtc gctgccgtgg ttggacgaga
      421 acgacacatg cggtttgccg accgcgtctc aagtacgttc ggtggagagc tggttggcct
      481 ggctgccgct ggagccgtgc ttggtatcta cactcgtgaa ccagtgatcg agcatctctg
      541 gaagaccggc cggcagctca tgcacacgct ggggctcgtc ggcttccctg tgtacccccg
      601 gttccccgag aacccccggg agtgtgcgga ccagctcgtc acgcagggga tcctgattca
      661 cccggcgaag gggacgttct gcccgacgta ctcgcactcc gaggccgacg tcaaggccgt
      721 ggtcaacgct gtggccaatc catgcgcgtc ctgatcaccg ggggtacggg ctcgctgggc
      781 cacgcgctgg tccggcgctg gaaagactct gcagaacgca tcgtcgtctt ctcacgagac
      841 gaatggaagc aggcggagat ggcacgggtg taccccgagg gtggcgccca ggggatccgg
      901 tacttcctgg gggatgtccg ggacaagacc cggctggagc aggcgctggt ggggatcgat
      961 accgtgatcc acgctgccgc gctgaagcgc gtggacgctg tggcctataa ccctgtcgag
     1021 gttctcaaga ccaatgtcct cggaacccag aacgtcatcg aggccgcagt ctcagcaggg
     1081 gtacgtcagg tggtggtggt gtcttcggac aaggctgtgg aaccctcgaa tgtctatggc
     1141 tccagcaa
//
LOCUS       DASRPQ010000781         1124 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_92783, whole genome shotgun sequence.
ACCESSION   DASRPQ010000781 DASRPQ010000000
VERSION     DASRPQ010000781.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92783"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..622)
                     /locus_tag="VFD73_08980"
     CDS             complement(<1..622)
                     /locus_tag="VFD73_08980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
                     /protein_id="HZI74138.1"
                     /translation="MKFLVQAICVSEAAERGQQVFEITRETLAMETLGLSLGESKALL
                     RGVQDFVVAEQVADELERRRPCPHCGKRHTSKGQGRIEVKTVFGPVELPNPRWHRCSC
                     QSTGPNTFRPTTSWLNAQTSPELLYLETQWASLIPYAKVVQLLKDVLPVADTSNQETV
                     RNHLHATAERIEQDLGEERVCLFEGSDPDWEEQPLPDGPMTVGIDGG"
     gene            789..1076
                     /locus_tag="VFD73_08985"
     CDS             789..1076
                     /locus_tag="VFD73_08985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74139.1"
                     /translation="MSSDQQLNRCFHERRVAEGSALPLTFEHQPITPRPTATFRGRSA
                     AAAQAKRLWVFCHAFLNVQDAEVPLPQVQEVVAVEELLLTMQAKRSQWPSA"
BASE COUNT          205 a          366 c          336 g          217 t
ORIGIN      
        1 agccgccatc aattccaacg gtcatcgggc catccggtaa cggctgctct tcccaatccg
       61 gatccgagcc ctcgaacaga caaacgcgtt cttcgcccag gtcctgctcg atccgctctg
      121 cagtggcgtg cagatgattg cgcacggtct cttgattaga ggtgtcggca acgggcagca
      181 cgtctttcag aagctggacc accttggcat agggaatcag cgaggcccac tgcgtctcca
      241 aatacagcag ctctggactg gtctgtgcgt tgagccagct tgtggtgggc cgaaacgtgt
      301 tggggcccgt ggactggcac gaacatcgat gccagcgcgg attcggcagc tcgacggggc
      361 cgaacacggt cttcacttca atgcggcctt ggcctttgct cgtgtgccgc ttgccgcaat
      421 gcggacaggg acgccgtcgt tcaagctcat cggcgacttg ctccgcgacc acgaagtcct
      481 gcactccccg taacagcgct ttgctttccc cgagactgag cccgagcgtc tccatcgcta
      541 gcgtctctcg cgtgatttcg aacacctgtt ggccccgctc ggcggcttcg gagacacaaa
      601 tggcctgcac gaggaacttc atgaccgggt cctcccgcgc cgaccgagca tcgccaagcg
      661 ctcgttggct tcttgcagac taaaacggcc gggttccaat gggccgtgct gctcgagtcg
      721 ccgatcgacg ctctgccacc cctgctgaac ggtgtcccga agcaaattcc acgtgctggc
      781 tgatcgggat gagtagcgac cagcaactga atcgctgctt ccacgagcgc cgggtcgctg
      841 agggtagcgc cctcccgctg acgtttgagc atcagccgat aaccccgagg cccaccgcaa
      901 ccttccgggg gcgtagcgcc gcggccgccc aggcaaagcg gctctgggtc ttctgccacg
      961 ccttcctgaa tgtccaggac gcggaggtcc cactcccaca ggtccaggaa gtcgtagctg
     1021 tagaggaact tctcttgacg atgcaggcga aacgctcgca gtggcctagc gcgtgagcga
     1081 cgccggaagc tgttgaactc ctggccgtgg atgcgaaagg cgta
//
LOCUS       DASRPQ010000782         1979 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1032101, whole genome shotgun sequence.
ACCESSION   DASRPQ010000782 DASRPQ010000000
VERSION     DASRPQ010000782.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1979
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1032101"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..276
                     /locus_tag="VFD73_08990"
     CDS             121..276
                     /locus_tag="VFD73_08990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74140.1"
                     /translation="MPKNYDGLPAAANVEQAIVLAQLMILRDLERRAKLKVEQTQPIQ
                     SNLRPAA"
     gene            complement(525..1283)
                     /locus_tag="VFD73_08995"
     CDS             complement(525..1283)
                     /locus_tag="VFD73_08995"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HZI74141.1"
                     /translation="MHPTEGMWQEFLDQETPASERQELELHLSSCPSCCTITIELGHR
                     RAKVSQLLNELEASVPSRNYHDLIFPRGHGTPRRLLWAAGIALCVASAASATIHWGVW
                     QRAREWLLGPKPYSSAPAVLQQRPGGGAVAQSGISLQPRERIDVLFDEVPAGGEIEII
                     LRDDPGVSIIASEPVRFSVRSGSVSVANGGVAADYRIALPANLPQASVRVAGRLVCAK
                     HGTTLIGEARRTGPRTYVISFSSGPHAAAPATRP"
     gene            complement(1270..1821)
                     /locus_tag="VFD73_09000"
     CDS             complement(1270..1821)
                     /locus_tag="VFD73_09000"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZI74142.1"
                     /translation="MIGTLPPPVQPSDSTRFDESVAEVFRDRFAMLYRYLMRLSGDPA
                     LADDVAQESFVRLHRRGTMPTDPAAWLVTVANNIVREEYRSAKRRRHLLSQWLARDEA
                     PDRSPSSESDLLAQERRAAVREALDRLPERDRRLLILRHEGFSYREIAEALGVATSSV
                     GTLLARATAAMSQAYRGPTDASD"
BASE COUNT          367 a          633 c          648 g          331 t
ORIGIN      
        1 tcgctggagt ggtatggcta gatcgacacc gactcacaac cagtagccgg gttctcgcgc
       61 acgccacgat ctgtcatccg acggtcctgg agtctcgggg gccgggtgac agaggatatc
      121 atgccaaaga attacgacgg cttgccggcg gcggcgaacg tcgagcaggc gatcgtgctg
      181 gcgcagctca tgattctccg ggatctcgag cgccgggcga agctcaaggt ggaacagacc
      241 cagccgatcc agagtaacct gagaccggca gcctgagaac gtcgttgcga gagcccccct
      301 gatcatcctt ccgatcagcg gcgggctctg ctcactgctc gggccgctcc tcaatgggtt
      361 ctaccagtat cacgcaaacc aactcgcgca ggctagataa cgcgcttgtt gctcccgatg
      421 gcgtacccgg tatagtcggt ctttctctga ctggcagagc actgaggcag cgaatcctgc
      481 cagtagcaag ccaaggcggc ccacccgatc cagcagagtg gatttcacgg gcgagtggcc
      541 ggggctgccg catggggccc cgacgagaag gagatcacat acgttcgcgg gccggtccgg
      601 cgggcctcac cgatcagcgt cgtgccatgc ttggcgcaga ccagacgccc ggcgacgcgg
      661 accgacgctt gcggcaggtt cgccggcaac gcgatccgat aatccgccgc tactcccccg
      721 ttcgccactg atacgcttcc cgaccggact gaaaagcgta ccggctcgga cgcgatgatc
      781 gaaaccccag gatcgtctct caagatgatt tcgatctcgc caccggccgg gacttcatcg
      841 aacaacacat cgatccgttc ccgaggctgc agcgagattc ccgactgggc aaccgcgcca
      901 ccgccaggcc gctgttggag gacggcgggc gcactggagt agggcttcgg accgagcagc
      961 cactctctcg ctcgctgcca caccccccaa tggatggtag cgctcgcggc gcttgcgacg
     1021 cacagcgcaa tgccggcagc ccagagaaga cgccgggggg tgccgtggcc ccgggggaag
     1081 atcaggtcgt ggtagttccg cgacggcacg gaggcctcga gctcgttcag caattggctg
     1141 actttcgcgc ggcggtggcc cagttcgatg gtgatcgtgc agcacgaggg gcagctgctc
     1201 aggtgtagct ccaactcctg gcgctccgaa gccggcgttt cctgatccag aaactcctgc
     1261 cacattcctt cagtcggatg catcggtcgg tccccggtag gcttgtgaca tggctgcggt
     1321 ggcccgggcc agtagtgtgc cgacgctcga ggtcgccacc ccgagagctt cggcgatctc
     1381 ccggtaggag aaaccctcgt gtcgcaagat cagcagccgc cgatcccgtt ccggcaagcg
     1441 atcgagcgcc tcgcgcaccg ccgctcgccg ctcctgggcc agcagatcgg attccgatga
     1501 cggggaccgg tcgggtgcct catcccgcgc cagccattgc gacagcaggt ggcggcgtcg
     1561 cttggccgag cgatactcct cacgcacgat attgttcgcc acggtgacca gccacgcggc
     1621 ggggtcagtc ggcatcgtgc cccggcggtg cagtcgaacg aagctctctt gcgcgacatc
     1681 atcggccagt gccggatcgc cggagagacg catcaggtag cgatacaaca tggcaaagcg
     1741 gtcccggaac acctcggcaa ccgactcgtc gaatcgagtg ctgtcgctcg gctggacggg
     1801 aggagggagg gtgccgatca cgcgtggtgc agccgtatca tggtgacgtc ctgatggctc
     1861 gttcgagaga tagcgcagga acgcctggga gcgggctttt gtgacagcgg gaaggttaga
     1921 atccccagct gacctgggcg gtgagtgcgc gagaagagaa cgccacggat cggcgtagt
//
LOCUS       DASRPQ010000783         1733 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4165402, whole genome shotgun sequence.
ACCESSION   DASRPQ010000783 DASRPQ010000000
VERSION     DASRPQ010000783.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1733
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4165402"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..923
                     /locus_tag="VFD73_09005"
     CDS             <1..923
                     /locus_tag="VFD73_09005"
                     /inference="COORDINATES: protein motif:HMM:NF015563.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HZI74143.1"
                     /translation="DAAAADPPAWLPSGHSRRHEPGRAAVGAAFSPVNPFQVIIAQKL
                     AELSPGSGLVFRLAVLAPALGLWIAGTLLYARRHREPIDSPLAIRQLPLQWRDVAVVA
                     FIVIAFGIYIYGAQRLGWEFDQLSALFFVVGVTAGLLGHLGVNGTAEAFVDGFKSMAF
                     AGLLIGFARAIYVVLNEGQIVDTVVQSLFTPIAHLPPTLSAFGMMLGHSAIHLPVPST
                     SGQAVLTMPLLVPLSDLIGLPRQVAVLAYQYGAGLCELITPTNGALMAMLAAAGVRYE
                     DWMRFALPLYGVLVVLAIAALGVAVAVGLR"
     gene            complement(916..1362)
                     /gene="trxA"
                     /locus_tag="VFD73_09010"
     CDS             complement(916..1362)
                     /gene="trxA"
                     /locus_tag="VFD73_09010"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HZI74144.1"
                     /translation="MTATQPARPVVVQCPFCAAANRVDLSRLSAGPKCAKCGKPLRLD
                     RPLKVTDRDFDRTISSSSVPVLVDFYADWCGPCRMMAPTLDDLAQRRAGQTLVLKLDT
                     EANPQIAARFGIRGIPTVIAFQDGKERSRHVGVADLKVLEGLVGLT"
     gene            1553..>1733
                     /locus_tag="VFD73_09015"
     CDS             1553..>1733
                     /locus_tag="VFD73_09015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74145.1"
                     /translation="MSELTIRDMEQDEDFAAWFSEILEMEENPAGWSSVLDERYLILS
                     NEIGDWIGGLRFWLRG"
BASE COUNT          294 a          524 c          558 g          357 t
ORIGIN      
        1 ccgatgctgc tgctgctgac ccgcccgctt ggcttccctc cggtcacagc cgtcgccatg
       61 agcctgggcg tgcagccgtt ggagcagcgt tcagcccggt gaaccctttc caggtcatca
      121 ttgcccagaa gctggcagag ctctctcccg gctcgggcct ggtcttccgg ctggcggtcc
      181 tggctcctgc actcggacta tggatcgcgg ggacgttgct ctatgcccgt cgacatcgcg
      241 agccaatcga ttctccgctc gccatccgcc agcttcctct ccaatggcgc gatgtggcgg
      301 tggtggcttt catcgtgatt gccttcggga tctacatcta tggggcgcag cgactcggat
      361 gggagttcga ccagctctca gccctcttct tcgtggtcgg agtgactgca ggactgctgg
      421 ggcacctggg tgtgaacgga accgcagagg ccttcgtcga tggattcaaa tccatggcct
      481 tcgctggact gctcatcgga tttgcccggg caatttacgt ggtgctgaat gaggggcaga
      541 tcgtggacac agtagtgcag agtctcttta cccccattgc gcacttgccc ccgacccttt
      601 ccgccttcgg catgatgctg ggccattcgg ccatccacct gccggttccg agcaccagcg
      661 ggcaggccgt tcttacgatg cccctcctgg tgccgttgtc cgacctgatc ggcctgcctc
      721 ggcaggtagc ggttctggcg tatcaatatg gggccggatt gtgtgagctg atcaccccga
      781 ccaacggggc gctcatggcg atgctggctg cagcaggggt ccgttacgag gactggatgc
      841 gctttgcctt accgctctac ggtgtgctgg tcgttctggc gattgcggcc ctgggagtgg
      901 cggtggctgt cggtctcagg taagcccgac caaaccctcg agcaccttga ggtcggccac
      961 cccgacgtgc cgcgaacgct cctttccatc ctggaaagcg atcacggtgg gaattccccg
     1021 tatgccgaac cgcgcggcaa tctgagggtt ggcttcggta tcgagcttta ggaccagcgt
     1081 ttgtccggcc cgccgctggg ctagatcgtc cagggtggga gccatcatcc ggcaggggcc
     1141 gcaccagtcg gcgtagaaat caaccagcac cggaacgctg gagctggaaa tcgttcggtc
     1201 gaaatcccgg tcggtgacct tcagcgggcg atccagccgc aatggcttcc cgcacttggc
     1261 gcacttaggc ccggccgaca gccggctaag gtcgacgcga ttggcagcgg cgcagaatgg
     1321 gcattgaacg acaaccggac gcgctggctg agtagcagtc atgaggcacc ctcagtgtgt
     1381 agatcttctc aagcttagcc atgcagaagg ccaaggcaac tgtaacccgc cgagggctag
     1441 tgtggttcac cgcccgtccc tccggtgacg atgttcacag acgggaacag gcacgctggc
     1501 attagtgttg ctgacaggga gaagggagtc tcccatctgg aaggcggggc agatgagcga
     1561 gctgacaatc cgtgacatgg aacaggacga ggacttcgcg gcctggttct cggagatcct
     1621 cgagatggag gagaatccgg ccggctggtc cagcgtgctc gatgaacgct acctcattct
     1681 gagcaacgag atcggtgact ggatcggggg cctgcggttc tggctgagag gcg
//
LOCUS       DASRPQ010000784         1086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4165466, whole genome shotgun sequence.
ACCESSION   DASRPQ010000784 DASRPQ010000000
VERSION     DASRPQ010000784.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4165466"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            267..665
                     /locus_tag="VFD73_09020"
     CDS             267..665
                     /locus_tag="VFD73_09020"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HZI74146.1"
                     /translation="MNTPALADPSSASSNSDHAPVFAYMAVSEPEVLARFFRVLSDPT
                     RVRLLQLLLEAPTGECPVGELVTAVSAPQSRVSTHLGCLRWCGLVQTRRAGKQVYYRV
                     ADPRVREVLSVGGALLRDYAAGVATCGVNR"
     gene            702..>1086
                     /locus_tag="VFD73_09025"
     CDS             702..>1086
                     /locus_tag="VFD73_09025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74147.1"
                     /translation="MTPLITVYRSTRLMPAAYQFYCAILRTFPARGTPPDPAELGRLA
                     ERFAVPLAATLAECVAQDLLQLNAATGRIRAAYPFSGAPTVHRVTLVSGPAGGGDAGG
                     RGALNGRPGEQVYAMCALDALGIPLM"
BASE COUNT          171 a          353 c          351 g          211 t
ORIGIN      
        1 agctgtacac tccacttggt ccggcaacga gtctctgggt ctggtcgcgg tctttgccgc
       61 aaaacgaaca cgtggaaggt cctgcgcgcc gtgccatatc gggctgctct caggcgtact
      121 gcgcggtgag acgtgagggc gatactcagt agcaagtcag tcgcaaaagc cgccacgagc
      181 gactcgcttc ccttgaccac ttgcgatata ttcatcatat ctggttatct tgatgtgacg
      241 gcgctggaaa aacaaggcgg acgacgatga acactcccgc actggcagac cccagcagcg
      301 cttcctccaa ttccgatcac gcgcccgttt ttgcgtatat ggcggtttct gagcctgagg
      361 tgctggcgcg gtttttccga gtgctgagtg atcccacgcg ggtgcgcctc ctccagctcc
      421 tgctggaggc ccccacgggt gagtgtccgg tgggcgaatt ggtcactgcc gtgtccgctc
      481 cccagagccg ggtctcgacc cacttggggt gcctacgctg gtgtggcttg gtccagaccc
      541 ggcgtgcggg caagcaggtc tactaccggg tggccgaccc acgcgtccgg gaagtgttga
      601 gcgtgggcgg cgcgctgctg cgcgactacg cggcgggtgt ggccacctgc ggggtgaatc
      661 gctagcccga cgagagcacg acaagcgcat caggaggcca gatgactcct ctcatcaccg
      721 tctaccgctc aacccggctc atgccggcag cctatcagtt ctactgcgcc atcctccgga
      781 cgtttcccgc gcgcggcacg ccgcccgatc ccgcagaact cggccggttg gctgagcggt
      841 tcgcggtgcc gcttgccgca acgcttgccg agtgtgtggc tcaagacctg ctccagctca
      901 atgccgcaac gggacgcatc cgtgccgcgt acccgttctc cggtgcgccc accgtgcacc
      961 gggtcacgct ggtgtccggc cccgctggcg gcggggacgc aggaggacgt ggcgcactca
     1021 atgggcgacc gggtgagcag gtctatgcga tgtgtgcgct ggatgcgctc ggtattcccc
     1081 tgatgc
//
LOCUS       DASRPQ010000785         2761 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1032488, whole genome shotgun sequence.
ACCESSION   DASRPQ010000785 DASRPQ010000000
VERSION     DASRPQ010000785.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2761)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2761)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2761
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1032488"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(22..1209)
                     /locus_tag="VFD73_09030"
     CDS             complement(22..1209)
                     /locus_tag="VFD73_09030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74148.1"
                     /translation="MTSWRGRSTRFSNAPLLRAALLGALLACSDNGPTAPTPAEIVSG
                     RDIFRFDTFGDETFWTDTLRMHEVISAAVSPATALSVGLKVDADALPPGLLQSADLNS
                     PATTVALLKLNAVVGLKGTVENINGKDTLTHVGITCALCHSTVNNSVQPGIGQRLDGW
                     PNLDLNPGAIIALSPALSDAQKSVYNSWDPGKYDARYNFDGQNDPAVIPPAYGLEGIH
                     SVTYTGDGDRPAYWNRYVAVTQMHGHGVFSEPRLNINVANPPDQVESKLPDLEAYQLS
                     LTKPAPPPGTFDPAAAARGQAVFNGQGQCATCHTPPLFTDANIRLHPPSEIITDPTHA
                     ERSATKMYRTTPLRALWQHAPYFHDGSSATLEDVVNRYDAAKNLQLTDQQKADLVQYL
                     KSL"
     gene            complement(1263..2027)
                     /locus_tag="VFD73_09035"
     CDS             complement(1263..2027)
                     /locus_tag="VFD73_09035"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HZI74149.1"
                     /translation="MFINGLERRLELFCFVLGAPSDEIVTLSDHEGCEALGPSFRGRL
                     CQQLAQLPPRRLEAGHYLYRMGHPGRSLFLVQSGLIKTSTVSAEGEELTLRLHKPGDL
                     LGELCLCDGGRKEDAIALEPSTVSEIPFAALLGRLRQDPDAAVELASAVCDRLADAYQ
                     QIESLSWDTVLYRLIRTLLRLASELGEPCDTGIRLSHYIRQEELARLVGARREVVSGL
                     LNRLRASGHISYSPRGAITVRRAGLQRFLEARSRAG"
     gene            complement(2064..2711)
                     /locus_tag="VFD73_09040"
     CDS             complement(2064..2711)
                     /locus_tag="VFD73_09040"
                     /inference="COORDINATES: protein motif:HMM:NF036806.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="HZI74150.1"
                     /translation="MRTLKRATQGTTGRILELLREGPRTVDELARALDLTRTAVRAQL
                     ASLLRDDLVEQRESRRGTSKPSHVYGVTARAELLFSQAYVPMLTQLLHALARRMPPAE
                     FDSIMHEVGRGVLQGRALPRGPLADRVAGASALLNELGGLTTVTRENGGYLIRSHGCP
                     LAAATIDHPEVCNALVSLLSEYVGATVTKCCEQYKRERCCFEITDAAGQDGRLLH"
BASE COUNT          447 a          873 c          924 g          517 t
ORIGIN      
        1 gatcgagatc tttcctgtgg tctagagcga cttcaggtac tggaccagat cggccttctg
       61 ctggtcggtg agctgcagat tcttggcggc gtcgtagcgg ttgaccacat cctccagcgt
      121 cgccgagctc ccatcgtgga agtagggcgc gtgctgccag agagcccgga gcggcgtggt
      181 gcggtacatc ttggtggcgc tccgctcggc atgggtcgga tcggtgatga tctcgctcgg
      241 aggatgcagc cggatgttgg cgtcggtaaa gagcggaggg gtgtggcagg tggcgcactg
      301 tccctggccg ttgaacaccg cctgtccccg agccgccgcg gcagggtcga acgttccggg
      361 cggtggggca ggcttggtga gactgagctg gtacgcctcc agatcgggca gcttgctctc
      421 cacctgatcc ggcgggttgg ccacgttgat gttgagccgc ggctcggaga acacgccatg
      481 cccgtgcatc tgggtcaccg ccacatagcg gttccagtac gcgggccggt cgccgtcgcc
      541 ggtgtaggtg acgctgtgaa tgccttccag accgtaggcc ggggggatca ccgcgggatc
      601 gttctgtcca tcgaagttgt atcgcgcgtc gtacttgccg ggatcccacg agttgtacac
      661 cgacttctgc gcgtcgctga gcgccgggga gagcgcgatg atcgcgcccg gattgaggtc
      721 gaggttgggc cacccgtcga gccgctggcc gatgcccggc tgcactgagt tgttcaccgt
      781 cgaatggcac agcgcgcagg tgatgccgac gtgcgtgagc gtgtccttcc cgttgatgtt
      841 ttcgacggtc cctttcagtc cgacgactgc gttcagcttg agcagcgcga cggtggttgc
      901 gggggagttg aggtcggcgc tctggagcag acccggtggc agcgcgtcgg catccacctt
      961 gagtccgacg ctcagcgccg tggcgggact caccgccgcg ctgatcactt catgcatgcg
     1021 aagggtgtcg gtccagaacg tctcgtcacc gaacgtatcg aatcggaaga tgtctcttcc
     1081 gctcacgatc tcggcgggag tgggcgcggt cggtccgttg tcgctacagg ccagcaacgc
     1141 accgaggaga gcggcccgga gaagaggagc gttcgagaag cgggtggagc ggccacgcca
     1201 ggaggtcatg gctcaacgta ccggcggcct cctggctcgt cagttatctc gctaacaccg
     1261 tctcatccgg cgcggcttcg cgcctcgagg aagcgttgca gccccgcccg gcggacggtg
     1321 attgctcctc gcggcgagta gctgatgtga ccactggccc ggagccggtt caagagaccg
     1381 gacaccacct cgcgccgagc tccgaccaat cgcgccagct cctcctgcct gatgtaatgc
     1441 gacaggcgga taccggtgtc gcacggctcc cccagctcgc tggcaaggcg aagcagcgta
     1501 cgaatcagcc gatagagcac agtgtcccag gagagacttt cgatctgctg gtaggcatcg
     1561 gccaggcggt cacaaactgc ggaggcgagc tccaccgcgg cgtccggatc ctgccgcagc
     1621 cgtcccagca gtgcggcgaa cggaatctcg ctcacggtgc tcggctccag cgctatcgcg
     1681 tcttccttcc tgccgccgtc acagagacag agctcaccca gaagatcgcc gggcttatgt
     1741 agtcgaaggg tgagctcttc gccctcggcg gagacggtgc tggtcttgat cagcccgctc
     1801 tggaccagga agagactgcg tcccggatgt cccattctat agaggtagtg gcccgcctcc
     1861 agccggcgag gcggaagctg ggccagctgc tggcagagtc tccctcggaa tgaggggccg
     1921 agcgcctcac agccttcgtg atccgaaagc gtaactatct cgtcgctcgg cgcgccgagg
     1981 acgaagcaga atagctccag ccggcgctcc aggccgttga taaacatcgc tcctccaatc
     2041 atcactcgcg tgcgctgagt tcgtcagtgg agcagccggc cgtcctggcc cgccgcgtcg
     2101 gtaatttcga agcagcaccg ctcgcgcttg tactgttcgc agcacttggt aaccgtcgcg
     2161 cccacgtact cgctcagcag gctcacgagg gcgttgcaca cttcggggtg gtcgatggtc
     2221 gcggcggcga gtgggcagcc atggctccgg atgaggtagc cgccgttttc ccgagttacg
     2281 gtagtcaggc cgccgagctc gttgagcagg gcgctcgcac cggcaacccg gtccgcgagg
     2341 ggtcctcgcg gaagcgctct cccttgcagc acgccgcgtc cgacttcgtg catgatggag
     2401 tcgaactccg ccggaggcat tcgccgcgcc aaggcgtgaa gcagctgggt gagcatgggg
     2461 acgtaggcct gggaaaagag cagctcggcc cgggcagtca ccccgtacac gtgcgacggc
     2521 ttgctcgtcc cacggcggct ttcccgctgc tccaccaggt cgtcccgaag cagcgaggcc
     2581 agctgcgccc gcacggcggt ccgggtcaga tccagtgccc gggccagttc gtcgacagtc
     2641 cttggacctt cgcggagcag ttccaggatt cgtcccgtcg ttccctgcgt ggctcgcttc
     2701 agagttctca cggtctccct ccagaaaacc tagattagta tacaatatct tgcttttctc
     2761 g
//
LOCUS       DASRPQ010000786         1048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1660222, whole genome shotgun sequence.
ACCESSION   DASRPQ010000786 DASRPQ010000000
VERSION     DASRPQ010000786.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1660222"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            398..763
                     /locus_tag="VFD73_09045"
     CDS             398..763
                     /locus_tag="VFD73_09045"
                     /inference="COORDINATES: protein motif:HMM:NF013412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HZI74151.1"
                     /translation="MDGSPRVVPIWFHWTGEQVVLGSPPKAPKLKALAADPRVALTID
                     DNQAPWKVLLIRGRASVEVLDDLGPEYELSATRYLGPEQGSAWASTLRGKPMARIAIT
                     PGWVGILDFQTRFPSALTL"
BASE COUNT          215 a          322 c          334 g          177 t
ORIGIN      
        1 cggcttctga ggaccgccgg agtatctggt cgctgggtgg cgattgtgca cggcggcggc
       61 tgccacggga ctgcgcgtgg attgcggccc gtcggctgct ccgatcagat gggttcggct
      121 ttggggccct ttgtccctgg cgtggcgcca cgctgtgcgc aataatcctg cctggcaggt
      181 aagacttgtt cccggccggg aagcgaagac ggcagccgga agccggaagc cggctgcgct
      241 tcggggccgc gggccggtga cgcggttcct cccgtctcgc gccaggatcc tcaagggagg
      301 ttgggatggc ccagcaaggc agcctcgaac tactcgatga cccggtggcc acggcactgc
      361 tggagtcggt caaccggcga ggctggccta tacctggatg gacggcagtc ccagggtcgt
      421 gcccatctgg tttcactgga ccggtgagca agtcgtcctc ggctcgcccc cgaaggcacc
      481 taaactcaag gccctggccg cagacccgcg ggtggcactg accatcgatg acaaccaggc
      541 gccctggaag gtactgctta tccgcggacg cgcgagcgta gaggtgcttg atgatctggg
      601 cccggagtac gagctttcgg caacccggta tctcggcccg gagcagggct cggcctgggc
      661 cagcacgctg cggggaaagc ccatggcccg tatcgccatt acacccggct gggttgggat
      721 actggacttc cagacccggt tccccagcgc cctgacgctg taggaccaac agacgctggc
      781 aaatacgcag tgcagccaga gcgcgtaaat ggaacgacaa cccgtacaag aaaaggtaca
      841 gctaattagg accagatact tggacacact ctaatcaaac gtgcataaca ggcaatcggt
      901 tcgccgaccg caacgccaaa tctactgccg atcagagcaa ataatcgcca aggctgagcc
      961 cctgatgtga acaacaagga tgaatttctg accgccaata tcgctgacga tttacagccc
     1021 agcgcacaag tatgcgggca agcaacgc
//
LOCUS       DASRPQ010000787         3341 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1032716, whole genome shotgun sequence.
ACCESSION   DASRPQ010000787 DASRPQ010000000
VERSION     DASRPQ010000787.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3341
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1032716"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..461
                     /locus_tag="VFD73_09050"
     CDS             <1..461
                     /locus_tag="VFD73_09050"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HZI74152.1"
                     /translation="PKGFQTVVAPTDIPKDIPPIDLNEKPFDPKDFTGKGVEGGIAAG
                     VAGGTGPVTGEVFLEAQLDDPVQVISQPQPRYPPVLASAGITGRVEMQFIVDTTGHVE
                     PASFKIMKTTHPAFGEPAREAILKSVFKPAKFKGRPVRQLVQQAVAFKQQ"
     gene            489..1238
                     /locus_tag="VFD73_09055"
     CDS             489..1238
                     /locus_tag="VFD73_09055"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HZI74153.1"
                     /translation="MSVDLLHLWGQMGAFAKGIVVIMAIMSIYSLTIVITKLIQVKRS
                     ERATRKFAPEFSRAIQEENLDQAITLAEKNKKSHLARVVGEALAEVKPLLRDRATITA
                     ADINSAERAVERQMLIVLAEFKRGLGVLGTVGSTAPFVGLLGTTMGIVNAFVGMAQQG
                     ASGGLAGISAGIAEALITTAFGLMVAIPAVWAYNYFTTKIENLTVEMTYGSKELIDYL
                     IKSVGSEFGRSIFTKEFQAQKAVTGSGHIHG"
     gene            1219..1683
                     /locus_tag="VFD73_09060"
     CDS             1219..1683
                     /locus_tag="VFD73_09060"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HZI74154.1"
                     /translation="MAISTANTGGTTSVKSDINVTPMIDVMLVLLIIFMIVTPLIAAG
                     FKATLPKGKNLDPRPEGENEIVLGIDQAGRYFLNGRPLPNGTLEDQLRSLYAARTEDK
                     ILYFKADNQLKYGKIQEAVETARRAGVRVMAAITEPNKTAMFGTDVKKKEKK"
     gene            1685..2104
                     /locus_tag="VFD73_09065"
     CDS             1685..2104
                     /locus_tag="VFD73_09065"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HZI74155.1"
                     /translation="MAMTTGASAGVQSDINVTPMIDVLLVLLIIFMITQPLSRMALDV
                     QVPPPDTPQTTKAPPSQIVLELGDDGGYAINGQPVPKDQLDTQIHAIYDQRPAKLLFI
                     KAGANRVYQDVIEAMDVARGAGVQIIGFTPREADKKQ"
     gene            2194..3006
                     /locus_tag="VFD73_09070"
     CDS             2194..3006
                     /locus_tag="VFD73_09070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74156.1"
                     /translation="MLECSVDEVVTRPPAPLTLKLPTTRRRFAGLTASVLVHVILLGL
                     LVLHGERVWSRSAVPGTPAPGAPGSMAGGGGGPRVAYITLPSAPPAEAPAPRKVTPPI
                     SPPKRVVTPAAQPVQPEAVSQPADTARAAAPTQPALAAATGPGTGGGPGTTGNGGPGQ
                     GNGVGRGVSGNGPGGGGGRARPPEPRDMAFPFDSPPKELRGMSLSVTFWVRVDGVVER
                     YTVEPEIKDRDYAKKFDEVMRAFRFTPAQAPDGTRIPGTTRISFTLPGKSSS"
     gene            3084..>3341
                     /locus_tag="VFD73_09075"
     CDS             3084..>3341
                     /locus_tag="VFD73_09075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HZI74157.1"
                     /translation="MSRLFLRKSIQDCENDILERGGLRRSLNKWHLTALGVGATIGAG
                     VFATTGTAIVGDPLRPGAGPAIVISFLLTALTCGFAALCYAE"
BASE COUNT          645 a         1049 c         1064 g          583 t
ORIGIN      
        1 ctccgaaggg tttccagacg gtggtggcac cgaccgacat cccaaaggac atcccgccca
       61 tcgacctgaa cgagaagccc tttgatccga aggacttcac cgggaagggc gtggagggtg
      121 gcattgccgc cggtgtggcc ggcgggaccg gtccggtcac cggagaggtg ttcctggaag
      181 cccagctgga cgatccggtc caggtcatct cccagcctca gccccggtat ccgccggtgc
      241 tggccagtgc gggaatcacc ggacgggtcg aaatgcagtt catcgtggac accaccggcc
      301 atgtggagcc ggcgtcgttc aaaatcatga agacgacgca tccggcgttt ggcgagcccg
      361 cgcgcgaggc catcctcaag agcgtgttca agccggcgaa gttcaagggc cgtcctgtcc
      421 ggcagctggt ccagcaggcc gtcgcgttca agcagcagta gcttcgttcc ccctggaggc
      481 cttacaacat gagcgtagat ctacttcacc tgtggggcca gatgggcgcc tttgccaaag
      541 gcatcgtcgt catcatggcg atcatgtcca tctactcact caccatcgtc attaccaagc
      601 tgatccaagt aaagcgtagc gagcgagcga ctcggaagtt cgccccggag ttctcccgcg
      661 ccattcagga ggagaacctg gatcaggcga tcacgctggc cgagaagaac aagaagagcc
      721 acctcgcccg cgtggtgggt gaggcgttgg ccgaagtgaa gccgttgctc cgcgatcggg
      781 ccaccatcac cgcggccgac atcaactcgg ccgagcgggc agtggagcgc cagatgctca
      841 tcgtgctggc cgaattcaag cgcggcctcg gcgtgctggg taccgtgggt tccacggcgc
      901 cgttcgtcgg gctgctcggc accacgatgg gtatcgtgaa cgccttcgtg ggtatggcac
      961 agcagggagc gtccggtggt ctggccggca tctcggcagg tatcgccgaa gccctcatca
     1021 ccacggcgtt cggactcatg gtcgcgattc cggcggtgtg ggcgtacaac tatttcacca
     1081 ccaagatcga aaatctgacg gtggaaatga cctacggctc caaggagctg atcgactacc
     1141 tcatcaagag cgtggggagc gagttcgggc gttcgatctt caccaaggaa ttccaggccc
     1201 agaaggcggt gaccggcagt ggccatatcc acggctaaca ccggcgggac gacctcggtc
     1261 aagtcggaca tcaacgtgac gccgatgatt gacgtcatgc tggtgctgct gatcatcttc
     1321 atgatcgtga cgccattgat cgcggcgggg ttcaaggcca ccctcccgaa agggaagaac
     1381 ttggatcctc gtcccgaggg cgaaaacgag atcgtcctgg gcatcgacca ggccggccgg
     1441 tacttcctca acggacggcc gctcccgaat gggacgctgg aagaccagtt gcgctcgctg
     1501 tacgcggccc ggactgagga caagatcctc tacttcaagg ccgacaatca gctgaagtac
     1561 ggcaagatcc aggaggcagt ggaaaccgct cggcgggccg gggtccgggt catggctgcg
     1621 atcaccgagc ctaacaagac cgccatgttc ggtaccgacg tgaagaagaa ggagaagaag
     1681 tgacatggcg atgacaaccg gagcctcagc gggagtacag tcggacatca acgtgacgcc
     1741 gatgatcgac gtgctcctgg tgctgctgat catcttcatg atcacccagc cactttcccg
     1801 gatggcgctc gacgtccagg tgcctcctcc ggatacccca cagaccacga aggcgcctcc
     1861 cagtcagatc gtgctggagc taggcgatga tggaggctac gccatcaatg gtcagccggt
     1921 tccaaaggat cagctggaca cccagattca cgcgatttac gaccagcgcc cagccaaact
     1981 cctgttcatc aaggcaggag ccaaccgggt gtaccaggat gtgatcgaag caatggatgt
     2041 cgcccgcggt gccggagtgc aaatcatcgg gttcactccg cgggaggcag acaagaagca
     2101 gtagagagaa gttcggatca tcgatcaccg cgggggtctc tttcaggggc ccccgcgcgt
     2161 gcgtttgccg gagacgatgg cgtctcttgg gttatgttag agtgctctgt cgacgaggtt
     2221 gttacgcgac cgcccgcacc acttaccctg aagcttccga cgactcgccg gcgcttcgct
     2281 ggactcaccg cttcagtgct ggtgcacgtg attctcctgg ggctcctggt gctgcatgga
     2341 gagcgcgtgt ggagccggag tgccgttccc ggcacgccgg caccgggtgc tcccggcagc
     2401 atggccggcg gtggcggggg tcccagggtt gcctatatta ccctgccgtc ggcgccgccg
     2461 gccgaggcac ctgctccacg caaggtgact ccaccgattt ctcctccgaa gcgggtcgtc
     2521 acaccggctg ctcagccggt acagcctgaa gcagtttcgc agccggccga tacggcgcgc
     2581 gctgcggctc caacccaacc ggcccttgcc gctgcgaccg gccccggtac cggcggcgga
     2641 cctgggacca ccggcaacgg cggacccggt caaggcaatg gagtcggccg tggtgtaagc
     2701 ggaaacgggc cgggcggggg aggcggaagg gctcggccac cggagccgcg cgacatggca
     2761 ttccctttcg actcgccgcc gaaggaactg cgggggatgt cgctcagcgt gaccttctgg
     2821 gtgcgcgtgg acggtgtggt cgagcgttat acggtagagc ccgagattaa ggatcgggac
     2881 tacgccaaga agttcgatga ggtcatgcgc gcattccggt tcaccccggc gcaggctccg
     2941 gatggaaccc ggattcccgg caccaccaga atctcgttca cccttcccgg aaagagcagt
     3001 tcctaaatca ctctatgacg gcacctccag gcccccagcc aactcgggtc agggcagaac
     3061 ccgggccgcg gtcgcagcga tcgatgagtc ggctcttcct gcggaaatcg attcaggatt
     3121 gtgagaatga catcctcgag cggggcggcc tccgccgttc cctcaacaaa tggcacctca
     3181 cagccctggg tgtcggagcg accatcgggg ccggcgtctt tgccaccacc ggcacggcaa
     3241 tcgtgggcga cccgctccga ccgggagccg gtcccgccat cgtcatttca tttctcctca
     3301 ccgccctcac ctgcggcttt gcggcgctct gctatgccga g
//
LOCUS       DASRPQ010000788         1135 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2286750, whole genome shotgun sequence.
ACCESSION   DASRPQ010000788 DASRPQ010000000
VERSION     DASRPQ010000788.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2286750"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..466
                     /locus_tag="VFD73_09080"
     CDS             <1..466
                     /locus_tag="VFD73_09080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZI74158.1"
                     /translation="QPETFCFLGFTHICGRSRRGTFQLQRKSRTDRMRATLRRVKDAL
                     RRRMHQPIPAQGRWLTQVVSGYFAYHAVPTNRRALMAFRHHVTDLWRRSLRRRSQTDR
                     LTWARMAKLADAWLPRPHILHPWPSARFAVRHPRWEPSARIRLARICAGGAQ"
     gene            complement(491..931)
                     /locus_tag="VFD73_09085"
     CDS             complement(491..931)
                     /locus_tag="VFD73_09085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74159.1"
                     /translation="MRDPTGELDTHAFLATDLDVTPHDMLQWFVLRWEIEVTFEEARA
                     HLGMESQRQWSDRAILRTTPALLGLFSLTSLWVHDIQAARAIAPRAASWYRKPCLTFS
                     DAIAAVRREIWRHQNSCTSRNSAEIINIPQAIWDRMLNALTYAA"
     gene            complement(954..>1135)
                     /locus_tag="VFD73_09090"
     CDS             complement(954..>1135)
                     /locus_tag="VFD73_09090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74160.1"
                     /translation="RGSVSFSLPAGTAAMLVVSATAREVIALWYGRTDRRVEIATGTA
                     VWYHAGLPPVPIPSS"
BASE COUNT          196 a          359 c          389 g          191 t
ORIGIN      
        1 ccaaccggag acgttctgct tcctggggtt cacccacatc tgcgggcgat cccgccgggg
       61 caccttccag ctccagcgga agagtcgcac cgaccgcatg cgggcgaccc tgcggagggt
      121 caaggacgcg ctgcggcggc gcatgcatca gccgatcccc gcccaggggc gctggctgac
      181 gcaggtggtc agcggctact ttgcctatca tgcggtgcca acgaaccgcc gtgccctcat
      241 ggccttccgc caccatgtga ccgacctgtg gcggcgctcg ctgcggcggc gcagccagac
      301 agaccggctc acatgggcgc ggatggcgaa gttggccgat gcctggctcc cccgaccgca
      361 catccttcac ccctggccaa gtgcccgctt cgccgtcaga cacccaaggt gggagccgag
      421 tgcccgaatc aggctcgctc ggatctgtgc ggggggcgct cagtaatggg catccctacc
      481 gcgatccatt tcaggctgcg tatgtgagag cgttgagcat gcgatcccag atggcttgag
      541 ggatattgat gatctctgcg ctgttccgag acgtgcaaga attctggtgt cgccagatct
      601 ctcggcggac ggcagcgata gcgtcgctga aggtgaggca aggtttccgg taccatgagg
      661 cagctctggg cgcgatggcg cgagcggcct ggatgtcatg gacccacagg gacgtgagcg
      721 agaataggcc gagcagcgcc ggggtggtgc gcaggatggc gcgatcggac cattggcgtt
      781 gactttccat gccaaggtgg gcgcgtgctt cctcgaaggt gacctcgatc tcccagcgca
      841 ggacgaacca ctgcagcatg tcgtgcggcg tgacgtcgag atcggtggcc aggaaggcgt
      901 gggtgtcgag ctcaccggtc gggtcgcgca ccaggagcca tccttcgaca ggctcaggat
      961 gaggggatcg gcacgggcgg caggccggcg tgataccaga cagccgttcc ggtcgcgatc
     1021 tcgacccggc ggtcggtccg gccgtaccag agcgcgataa cctctcgcgc ggtagcgcta
     1081 acgaccagca tagcagctgt accggccggc aggctaaagc ttaccgagcc tcttc
//
LOCUS       DASRPQ010000789         1389 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1660368, whole genome shotgun sequence.
ACCESSION   DASRPQ010000789 DASRPQ010000000
VERSION     DASRPQ010000789.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1389
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1660368"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1065
                     /gene="yidC"
                     /locus_tag="VFD73_09095"
     CDS             <1..1065
                     /gene="yidC"
                     /locus_tag="VFD73_09095"
                     /inference="COORDINATES: protein motif:HMM:TIGR03592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HZI74161.1"
                     /translation="HPIRVVRLADGSVHREIFAKSAEFNGPGQWIGLESEWYLTALIP
                     RSPGMLLTEAKVSETRADAAKPVELSQVGLRIPLSSLKPGQIWEGQIQSYMGPKEYDR
                     LKAVGVGLEKSIYFGGFPAPQNYGGLPMEWLAVPILWLMHRFYEYTHNYGVAIILLTV
                     ITKVLFFPLTIKSMTSMKAMQALQPQINALRSKFKSDPQRLQRETMELYRAHKVNPLG
                     GCLPMVVQIPIFYALYVALSVSVDIQNAPFICFGRLFGVDLWICDLAAHDPTYVLPIL
                     MGISMFIQQKMTPVMGDPRQAKMMLFMPVVFTFMFLNLPAGLVLYWTLSNVLQIAQQK
                     YMERIGKKPEKVPARAAKKA"
     gene            1109..>1389
                     /locus_tag="VFD73_09100"
     CDS             1109..>1389
                     /locus_tag="VFD73_09100"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmG family class I SAM-dependent
                     methyltransferase"
                     /protein_id="HZI74162.1"
                     /translation="MARQDPDHLRELLSAIPDLTGRPATSEDRVRFQRYLDLFTRWNQ
                     VHRMTALGSPAEIVRGLFLDSLLFLPVLPTSRPIKVVDIGAGSGVPGLP"
BASE COUNT          250 a          443 c          426 g          270 t
ORIGIN      
        1 cacccgatcc gcgtcgtgcg gctggcggac ggctcggtgc accgggagat cttcgcgaag
       61 agcgccgagt tcaatgggcc cggccagtgg atcgggctcg agagcgagtg gtacttgacc
      121 gcgctcattc cacgaagccc cgggatgctt ctgacggagg ccaaggtcag cgagacccgc
      181 gcggatgcgg cgaagccggt cgagctgagc caggtgggcc tcaggattcc gctatcttcc
      241 ctcaagccgg ggcagatctg ggaaggacag atccagagct acatgggccc gaaggaatac
      301 gaccggctga aagcagtcgg ggttgggctg gaaaagtcca tatatttcgg tgggttcccg
      361 gcccctcaga actacggggg cctgccgatg gaatggctag ccgtacccat cctctggctg
      421 atgcaccgct tctatgagta cacgcacaac tacggcgtgg cgatcatcct gctcaccgtg
      481 atcacgaagg tcctcttctt cccgctcacg atcaagagta tgacctcgat gaaggcgatg
      541 caggcgctcc aacctcagat caatgcgctg cggtcgaagt tcaagagcga tccccagcgc
      601 ctgcagcgcg agacgatgga gctctaccga gctcacaagg tcaaccctct cggcggctgc
      661 ctcccgatgg tggttcagat cccgatcttc tacgcgctct acgtcgcgct ctcggtgtcg
      721 gtcgatatcc agaatgcccc gttcatctgc ttcgggcgcc tcttcggcgt cgatctctgg
      781 atctgcgacc tggccgccca cgacccgacg tacgtgctcc cgatcctcat gggcatctcg
      841 atgttcatcc agcagaagat gaccccggtg atgggtgacc cgcgtcaggc caagatgatg
      901 ctcttcatgc cggtggtctt caccttcatg ttcctgaacc tgccggcggg cctggtgctg
      961 tactggactc tctccaacgt cctgcagatc gcccagcaga agtacatgga gcgcatcggc
     1021 aagaagccgg agaaggtccc ggcgcgagcg gcaaagaagg cctgatcgcc cgagtcttca
     1081 cggccaggcc tgcggtaagc tggcggccgt ggcccgccag gatccggatc atcttcggga
     1141 gttgctgtcc gcgatccccg acctgactgg tcgaccggcg acgagtgagg accgggttcg
     1201 gttccagcgc tacctcgatc tcttcacgcg gtggaatcag gtccatcgca tgacagcact
     1261 tggctcccct gccgagatcg tccgaggtct atttctggac tccctgttgt tcctgcccgt
     1321 gctgccaacc tcccggccga tcaaggtcgt tgacatcgga gctggcagcg gggtcccggg
     1381 gctgccaat
//
LOCUS       DASRPQ010000790         1420 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3539318, whole genome shotgun sequence.
ACCESSION   DASRPQ010000790 DASRPQ010000000
VERSION     DASRPQ010000790.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1420
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3539318"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..215)
                     /locus_tag="VFD73_09105"
     CDS             complement(<1..215)
                     /locus_tag="VFD73_09105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74163.1"
                     /translation="MDGSFGGSIRLVDLNFRYSVACARMEARILEHDQAGAGEPPLVL
                     VPGGLTGWDGWLPLVPALSASRRVVRV"
     gene            complement(178..414)
                     /locus_tag="VFD73_09110"
     CDS             complement(178..414)
                     /locus_tag="VFD73_09110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74164.1"
                     /translation="MAEQVPAVCDVLDTIERRNWERLRRLLHPEVHWTTAVEDHLFGP
                     TAVIACLSKDPPPAPPAYHELVDGRIIRWIDTPG"
     gene            complement(708..>1420)
                     /locus_tag="VFD73_09115"
     CDS             complement(708..>1420)
                     /locus_tag="VFD73_09115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74165.1"
                     /translation="ASVTGRPKVLRSRGSIVVDTGLTVSCPIGAHPCTASGQVDAAPP
                     PQPGGARGHLGTVRFTVPGGESKDVKVRLSGRGARMLRDSGTLRVRVSAEIRATGSRP
                     ATARQTGLIEAPQPPAFRPGTYTGVTSQGLPIFVTVSRTAVRSAFFRWRGICSDGREH
                     TSAVLLHGRAQVHRGHFSLGGQLDSGGSARVTGQVKNTQASGTLSRTGASRSGARCEV
                     SGITWQARTSAIEVKTSG"
BASE COUNT          237 a          469 c          460 g          254 t
ORIGIN      
        1 tgaacccgaa ccactcgccg ggatgccgat agcgccggca ccagtggaag ccagccgtcc
       61 cagccagtca atccacccgg taccaacacc aacggcggct cgcccgctcc agcctggtcg
      121 tgctccaaaa tccgcgcctc catacgcgcg catgctacgg agtagcgaaa gttcaggtca
      181 accaggcgta tcgatccacc gaatgatccg tccatccact agctcgtgat aggccggagg
      241 ggctggcggc ggatccttcg agaggcaggc gatcacggca gtgggtccaa acaggtggtc
      301 ctccaccgcc gtcgtccaat ggacctccgg gtgaagcagc ctgcggagtc gttcccagtt
      361 ccgacgctca atcgtgtcga gcacgtcgca gaccgcaggt acctgctctg ccatttcgct
      421 gcgcctccac gcggtgagga tgactgcgcg agcttatcgc tcggcctcga agctccagat
      481 tcacagtggg gtcatcgata actgacgccg cagagcgtcg acttcttccc gcaaagaaac
      541 aaagaaaaaa gtggccgcgg atgcctgatg tcagccgagt ggctcctttt tcacaggggg
      601 gagccattac ccgagctcgc aggatcccct cggagatccc atcagctggt ccctggaagc
      661 ccgcggggtg agtcgaacct cgatctgacc ttcgatcgag agcaatctca gccggatgtc
      721 ttgacttcga tcgcggaggt gcgggcctgc caggtgattc cgctcacttc gcatctcgcg
      781 ccggacctgc tggcgccggt gcgggagagg gtgccggagg cctgggtgtt cttgacctga
      841 ccggttactc gggctgagcc gccgctgtcg agctggcctc ccagggagaa gtggccgcga
      901 tgaacttgcg ccctgccgtg gaggaggacg gcgctggtgt gttccctgcc gtcgctgcat
      961 attccgcgcc agcggaagaa ggcggaacgg acagcggtgc ggcttacggt gacgaagatc
     1021 ggcaggccct ggctggtgac gccggtgtag gtgccgggcc tgaaggcggg tggctgggga
     1081 gcctcgatca gccctgtctg acgcgctgtc gccggtctgc tcccggttgc cctgatctcg
     1141 gccgagaccc tgaccctcag cgtcccgcta tcgcgcagca tccttgctcc gcgtcccgat
     1201 agccgcacct tgacgtcctt gctttcaccg ccggggaccg tgaacctgac ggtgcccaga
     1261 tgcccccggg ctccgccggg ctgggggggt ggcgccgcat cgacctggcc gcttgccgtg
     1321 caggggtggg cgccgatcgg gcagctcacg gtcaggccgg tatcgaccac gatcgagcct
     1381 ctcgatctga gcaccttggg tctaccggtc accgacgctt
//
LOCUS       DASRPQ010000791         1027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1346913, whole genome shotgun sequence.
ACCESSION   DASRPQ010000791 DASRPQ010000000
VERSION     DASRPQ010000791.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1346913"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..708)
                     /locus_tag="VFD73_09120"
     CDS             complement(<1..708)
                     /locus_tag="VFD73_09120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI74166.1"
                     /translation="MQALYPRPDEHVAVRTDLKAIFVSLELSRSTWVITSLAPGGGEK
                     MSKHAVPSGDIPALLARLSQLKEKARARTGQVFPIIVIQEAGLDGFWIHRVLQQEGIE
                     SYVVDPASIATSRRRRRAKTDKIDGEALVRALLAYKRGEPRVCAMVKAPTPHEEDRRR
                     ISREREVLTAERVQHVNRIKGLLFAQGIGDYEPLHRNRRERLEELITGDGRPLPECLK
                     AQISRELDRLELLIEQVK"
BASE COUNT          180 a          321 c          328 g          198 t
ORIGIN      
        1 tttgacctgt tcgatcagga gctcgagccg gtcgagctcc cggctgatct gggccttcag
       61 gcactccgga agcgggcgac catcgcccgt gatcagttcc tcaagccgct ctcgacgatt
      121 gcggtgcagg ggctcgtagt cgccgatccc ttgggcgaac agaagcccct tgatgcggtt
      181 gacgtgctgg acccgttcgg cggtcaggac ctcgcgttca cgactgatcc ggcgccgatc
      241 ctcctcgtgt ggggtcggag ccttgaccat cgcacacacc cggggctcgc cccgcttgta
      301 ggccagcagg gcgcgaacca gggcttcgcc atcgatcttg tcggtcttcg cccgccgacg
      361 ccgccgggac gtcgcgatgg aggcgggatc gacgacatag ctctcgatcc cttcctgttg
      421 caggacgcgg tggatccaga acccgtccag ccccgcttct tggatgacga tgatgggaaa
      481 gacctgcccc gttcgggcgc gggctttctc cttgagctgg gacaagcgcg ccaggagcgc
      541 ggggatgtca ccgctgggca ccgcatgctt ggacatcttc tcaccgccgc ccggagcgag
      601 ggaggtgatg acccaggttg aacgactgag ttcgagggag acgaagatcg ccttgagatc
      661 ggtgcggaca gcaacgtgtt cgtcaggtcg agggtagagg gcttgcatgg tcgctcccga
      721 gtgggtggtt cagcaccctc actctgccag agagcaagat gctaccagtc gcgccatggg
      781 atctcttgac gtgcgcctcg ctcccgcagc gcttgcagct cagccccata accaacctct
      841 ctgacaaccc ttatcagcca ggaaggtagg tcatctatgc agccctaaaa ccctcagatt
      901 ccgagcatcc tggcgtcctt gaaacgatat cggtgcagtc gggcgtgagt gggcccagtt
      961 cagacgggtt tggtccagcg aagatactgt ctgtgcgggc gagcagaggc agtcaagcgc
     1021 cgctcat
//
LOCUS       DASRPQ010000792         1193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_723919, whole genome shotgun sequence.
ACCESSION   DASRPQ010000792 DASRPQ010000000
VERSION     DASRPQ010000792.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_723919"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..890
                     /locus_tag="VFD73_09125"
     CDS             <1..890
                     /locus_tag="VFD73_09125"
                     /inference="COORDINATES: protein motif:HMM:NF014774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HZI74167.1"
                     /translation="MGMLAASAEMRQRPDWVGQPDPDSPQQVNATRPPVLRSGPAPPT
                     VALFRGCVMDTLFSHIHQATRRTLEANGYKVVEIADQACCGALHEHAGDREAAVALAR
                     ENVSVLADKADYLVVNSAGCGALLKDYGHLLGTEEARHLAAKVRDISELLAERGPRPG
                     APLDLDVAYDAPCYLQHAQRVHEAPLAILKAIPGLRLQLLPGSDRCCGSAGIYSVLRP
                     DMARAVLDQKIAGVKSVTPAPSLVVTGNPGCLMQIGAGLRAADLPIGVAHPVELLDLS
                     YSEAGYYTNGAEKRLSLAR"
     gene            963..>1193
                     /locus_tag="VFD73_09130"
     CDS             963..>1193
                     /locus_tag="VFD73_09130"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74168.1"
                     /translation="MSEFDLQLGRERLDLVRHGAVLVTTEPAVFRVHGPGALACLQGL
                     LTNDLVKPGDNSMVYGALLTPRGAVVVDYWVVR"
BASE COUNT          215 a          378 c          377 g          223 t
ORIGIN      
        1 gaatgggcat gctcgcggcc agcgccgaaa tgcggcaacg ccctgattgg gtgggacagc
       61 cggatcccga ctctccacag caagtcaatg caactcgtcc gccggttctc cgatcaggcc
      121 ctgcgccgcc aacagtagcg ctcttccgcg ggtgtgtcat ggacacactc ttttcccaca
      181 tccatcaggc cacccgccgt accctcgaag ccaacggata caaagtcgtc gagatcgccg
      241 accaggcctg ctgcggagcg ttgcacgagc atgcaggcga ccgagaagcc gcagtcgctc
      301 ttgcgagaga gaatgtctct gtcctggcgg acaaagcgga ctatctcgtg gtgaatagcg
      361 cggggtgtgg cgccctgtta aaggactacg gccatctgct cggaacggag gaagccagac
      421 acctggcagc gaaggtccga gacatttccg agctcctggc ggagcggggg ccacgtccgg
      481 gggcaccttt ggacctcgac gttgcctatg atgctccgtg ttacctgcag catgcccagc
      541 gagttcatga agcgccgttg gccatcctca aggcgatccc gggactccga ttgcaactcc
      601 ttcccggctc ggatcggtgt tgcggctcgg ccggcatata ctcggtgctc cgccccgaca
      661 tggcgcgcgc ggtgctcgat cagaagatcg ccggcgtcaa atcagtgacg ccggcgccgt
      721 cgctggtcgt caccggcaat ccagggtgtc tgatgcagat cggcgccgga ttgcgagccg
      781 ccgacctgcc gatcggggtg gcccatcctg tcgaactgct cgacctgtca tactcggaag
      841 ccggctatta caccaatgga gcggaaaaaa ggttatcctt agcgagatga tccgcggaat
      901 ctcccacgag ttcgccggcg caccggacgg ctatccctca gtcgctcacc gagtcctccc
      961 gcgtgtctga gttcgatctg caactgggac gcgagcggct ggacctggtg cgccatggcg
     1021 cggtgttggt tacgaccgag cccgcagtgt tccgggtgca cggccccgga gcgctcgcct
     1081 gtttgcaggg actcttgacc aacgatctgg tcaaaccggg cgacaactct atggtgtacg
     1141 gtgcactgct gacaccacgc ggcgcggtgg tggtggatta ttgggtggtc cgt
//
LOCUS       DASRPQ010000793         1530 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3858629, whole genome shotgun sequence.
ACCESSION   DASRPQ010000793 DASRPQ010000000
VERSION     DASRPQ010000793.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3858629"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..354
                     /locus_tag="VFD73_09135"
     CDS             <1..354
                     /locus_tag="VFD73_09135"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZI74169.1"
                     /translation="EQARVGARWQDRELVFTTATGGQLDKDAVLRAFRKVVTAAGLDP
                     KEWTPREQRHTFVSVLSDEDVPIEKISDLVGHKDQTTTETVYRHQIRPVVLRGAEAMD
                     RIFPEGMELLPPADP"
     gene            complement(576..761)
                     /locus_tag="VFD73_09140"
     CDS             complement(576..761)
                     /locus_tag="VFD73_09140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74170.1"
                     /translation="MTEDRDSWLELLEIRDADAPMWEVVVACRECGMRQNFRGTESEI
                     GGSAEAWKKAHQCAAPG"
     gene            complement(891..1157)
                     /locus_tag="VFD73_09145"
     CDS             complement(891..1157)
                     /locus_tag="VFD73_09145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74171.1"
                     /translation="MPIADQEYEPDWEVTLRRWPASLGSGDPDDTDTYEVICCKCGDD
                     PALDYRQASAGLRQIRGPYPLMAGVAVFVQHGELRDTAEETTAQ"
BASE COUNT          265 a          512 c          469 g          284 t
ORIGIN      
        1 gagcaggcgc gagttggggc acggtggcaa gaccgcgagc ttgtgttcac cacagctacc
       61 ggcggccagc tggacaagga cgctgtcctc cgggcgttcc gcaaggtcgt tactgcggcc
      121 gggcttgacc ccaaggagtg gacgccgcgc gagcaacggc acacgttcgt ctcggtgctc
      181 tcagacgaag atgtgcctat cgagaagatc tccgatctgg tcggccacaa ggaccagacg
      241 accacggaga cggtctaccg gcaccaaatt cggcctgttg tgctgcgcgg cgccgaagcg
      301 atggaccgca tcttcccgga ggggatggag ctactgccac cagctgatcc gtagagatct
      361 acagccgaag cggctacctg cctactcccc cgatgacctg ctgaaatcgc gttcatcagt
      421 gcgcatcagg tgacagcgtt gagcgccgtt gtgtggccag aaagtggcca ccgcagccag
      481 atggcctggc tagttcgctt gactgtcaag cgtcaagggg cagttgccag gccctggcct
      541 tctagatgca aactaccggc gccgcgtccc ttacatcagc ctggggcggc gcactgatgc
      601 gccttcttcc acgcctcggc agagccgccg atctcagatt cagtcccccg gaagttttgc
      661 cgcataccgc actcacggca agcgactacc acttcccaca tgggggcgtc ggcatcgcgg
      721 atctccagaa gctcaagcca gctgtccctg tcttcggtca ccgttctcct gctcaggatc
      781 gtgttgcccg gctgatcgcg atgcggtgcc cgccagcgga cgccttcagg cgcgccgccc
      841 gcttcccccg gcgcaggcgg ttattcattg cggagcgtaa ccgcagcaac ctactgcgct
      901 gtcgtctcct cggccgtgtc gcggagctca ccgtgctgga cgaacactgc gacgccggcc
      961 ataagcggat aaggcccgcg gatctggcga agccctgctg aagcctgcct gtaatccagg
     1021 gcgggatcat caccgcactt gcagcagatg acctcatacg tgtcagtgtc gtccgggtca
     1081 ccgctgccga gactggctgg ccagcgccga agtgtaactt cccagtccgg ttcgtactcc
     1141 tgatcagcta tcggcacagg gctccccttt ttgctgcgat cgcactgcgg tcggcagatg
     1201 gccggtacgc cagacggcgc gctaagtccg caggccaacc ggcctatgcg cgggggcaag
     1261 gtgcagccag ccgtccgttc gtccctgcct gagatgcacc gaccccctgg cggcagcatg
     1321 gctcccgacc gtgcgcattc ggttgcgcta ccgctagtcc ggagtagcgc gcaatgccct
     1381 agtcaagttc agtcatgttt tacggttgcc gagacgttgc ctgcctggcc atgaccaagg
     1441 tcaccgctcg ctcgccggaa gacctgacga gtcctcctgc agcaggccag acggctgcgg
     1501 gagcccgtgt tagcttcgtg tcggctcatc
//
LOCUS       DASRPQ010000794         1201 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4166733, whole genome shotgun sequence.
ACCESSION   DASRPQ010000794 DASRPQ010000000
VERSION     DASRPQ010000794.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1201
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4166733"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            385..807
                     /locus_tag="VFD73_09150"
     CDS             385..807
                     /locus_tag="VFD73_09150"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZI74172.1"
                     /translation="MSRHISEAAHPERAARVRRVAVRPRSLIPYGWDLRGSWRVGLSG
                     IHFHDLRHAGNTLTADEGASLRELMDRMGHSSTRAALIYLHSSDERQRKLADAVGERA
                     RAALGIRERQLARKWHEAQVRYHETWRARQDSNPRPAA"
     gene            complement(1015..>1201)
                     /locus_tag="VFD73_09155"
     CDS             complement(1015..>1201)
                     /locus_tag="VFD73_09155"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI74173.1"
                     /translation="LTQKEVAERAGISQPALSRIELGGGVPDIETLRRLGNAMGVRFH
                     VIVGNEEADHEENLLVS"
BASE COUNT          209 a          389 c          393 g          210 t
ORIGIN      
        1 gcatcaggcc cgggaccagc acccggaatg cgcggcgcgc ggagatcggc cgccaccggc
       61 cgcgctggcc ggcactccac caatagccgc actcgcacgc agtgatctcc ccgggccggc
      121 cgggccggaa ccggcacctg cactgcatgc gccagaccgg gcgaaccggc tggactgaca
      181 gcaggtcgtt acgaagctgg tcaaaggcac tcatggacga ccgggcgact acccggcccc
      241 ggcccgggta tgcctgccat ccgtgacaac ctgaccgccg gtcccgcatg cggcagtgaa
      301 gcgcgcagta gtgaattaca cggaccgctg ctatggtcgg ccgctggcct ggcggtagct
      361 gtaacctgac gcgcacagat caggttgtcc cggcacatta gtgaagccgc gcatccggag
      421 cgcgctgcgc gggtccggcg ggttgcggtg cggccgcggt cgttgattcc ttacggctgg
      481 gacttgcgcg ggagctggcg ggtcggtctg tccgggattc acttccacga cctgcggcat
      541 gccgggaaca cccttaccgc tgatgaggga gcgagtctcc gcgagctgat ggaccggatg
      601 ggccatagca gcacccgcgc cgcgctgatc tacctgcact cctccgacga gagacagcgc
      661 aagcttgccg atgcggtcgg cgaacgtgcc cgcgcggcgc tcggcattag ggaaaggcag
      721 ctggcacgga agtggcacga agcccaggtc aggtaccatg aaacgtggcg cgcccggcag
      781 gattcgaacc cgcgacccgc tgcttagaag gcacctgaga agagtcgcag gaggtcgcct
      841 tgtgtcgctc aatgcgctac ttacctgtag cgacagtagc tggacgtcgc ctagcgtcgt
      901 ctggagtctg tcactgttgg ctccctgttt ggctcccgga tgaagttagc atcactaatg
      961 tttcacccaa cgaaaagcgc ggttatttca gtcgacgatc ctgctggtcg cggcttagct
     1021 caccaacagg ttctcttcgt ggtcggcctc ttcattgcca acgatgacat ggaaccgcac
     1081 gcccatggcg ttcccgagcc tgcgcagagt ctcgatgtca ggcacgccgc cgcctagttc
     1141 gatgcgcgag agggcgggct ggctgattcc cgctcgttcg gctacttcct tctgggtaag
     1201 g
//
LOCUS       DASRPQ010000795         1072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2613359, whole genome shotgun sequence.
ACCESSION   DASRPQ010000795 DASRPQ010000000
VERSION     DASRPQ010000795.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2613359"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..189
                     /locus_tag="VFD73_09160"
     CDS             <1..189
                     /locus_tag="VFD73_09160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74174.1"
                     /translation="DPDTKSVPVVILTSKSMTQQDKERLQGRITYVARKTEFDLSGLA
                     GLLRWASTSRQGSASEST"
     gene            186..572
                     /locus_tag="VFD73_09165"
     CDS             186..572
                     /locus_tag="VFD73_09165"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI74175.1"
                     /translation="MTYVILVVEDNERNLKLLRDVLEYAGYDVRVARTAEDGITLAVS
                     EPPDLVLMDLQLPGIDGMEALRRLRESPRTAGIPVVAVTAQAMKQDRERALTAGFNGY
                     VEKPISVRAFPDQVRSFLSGGQVGTE"
     gene            575..>1072
                     /locus_tag="VFD73_09170"
     CDS             575..>1072
                     /locus_tag="VFD73_09170"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI74176.1"
                     /translation="MDPVVLVVDDLAPNVRLLEAVLSPKGFRVVTASSGEQALDVLSR
                     ESPDVVLLDILMPGMDGYEVCRRIREDPGTAFLPVIMITASGEQEKIRAIESGADDFV
                     NKPFDQAELLARVRSLVRVKRYHDTIQHQAAELARWNRELEQRVQDQIEQLDRVSRLR
                     RFLPAQ"
BASE COUNT          195 a          321 c          366 g          190 t
ORIGIN      
        1 gaccccgaca cgaaatccgt ccccgtggtc atcctgacct ccaagtcaat gacccagcag
       61 gacaaggagc gactgcaggg gcggatcacg tatgtggcgc gaaaaacgga gttcgatctg
      121 tcgggcctcg cgggactgct ccgctgggcc agcacgagtc gccagggctc ggcttcggag
      181 tcgacatgac ctacgtgatc ctggtcgtcg aggataacga acggaatctt aagctgctgc
      241 gggacgtgct cgagtatgca ggctacgacg tgcgggtggc ccggacggcc gaggacggca
      301 tcaccctggc ggtcagcgag cctcccgatc tcgttctcat ggatctccag ctgcccggta
      361 tcgatggcat ggaggctctt cgccggctgc gcgagagccc gcggacagcg ggcatacccg
      421 tggtcgcggt aacggcccag gcgatgaagc aggatcggga acgggccttg acagccggct
      481 tcaacgggta cgtagagaag ccgatcagcg tccgcgcgtt tcccgatcag gttcgcagct
      541 tcctctcagg tgggcaggtg gggacggagt gacagtggat ccggtcgtac tcgtcgtgga
      601 tgatctggcg ccgaacgtcc gcctgcttga ggcggtgctg tcgccgaagg gattccgggt
      661 ggtcacggcc tcctccggag agcaagccct ggacgtgctg agcagggagt ccccagatgt
      721 cgtgctgctg gacatcttga tgcccggaat ggatgggtat gaggtttgcc gccgcatccg
      781 cgaagatccg gggacggctt tcctgccggt gatcatgatc actgcgagcg gagaacagga
      841 gaagatccgc gccatcgagt ccggcgccga cgacttcgtt aacaagcctt tcgaccaggc
      901 cgagttgctg gcccgggtac gctccctggt tcgagtcaag cggtaccacg acacgatcca
      961 gcatcaggct gccgagctgg cgcgctggaa tcgtgagctt gagcagcgcg tccaggacca
     1021 gattgagcaa ctggaccgcg tgagccggct gcgccgtttc cttccggccc ag
//
LOCUS       DASRPQ010000796         1428 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1347727, whole genome shotgun sequence.
ACCESSION   DASRPQ010000796 DASRPQ010000000
VERSION     DASRPQ010000796.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1428
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1347727"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            184..>1428
                     /locus_tag="VFD73_09175"
     CDS             184..>1428
                     /locus_tag="VFD73_09175"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HZI74177.1"
                     /translation="MRYVGVIRGRRLGPDPGPVLRELSTPLLHVLAMATWRCVSGARC
                     PSPSGELLAPEGRWATLEAALQGDTVRVRWPLQIAVMDTLPLITEFDDDTTGSGQTDS
                     LTPGRATPGGAYEWFFPTGTRALVSARINEDLRIRLSPSADAWVPAADARPLAPGLPA
                     PHAVVSSISVTPRSDRVALRIPLTARIPFQVSEADRSLTIRFYGAAGDVDWIRYGSDA
                     LVKRVSWDQVSRDELTLTAELTQPVWGYRARWSRNDLIFEIRRPPSIRRNNPLRGRVI
                     AVDPGHPPLGATGPTGLREADANLAVALKLRSLLEAAGAHVIMTRTTDSAVDLWSRVS
                     LAERSGAELLVSIHNNALPDGVNPFTNNGTSVFYNTPRSLPLASEVQKALVHRLKLPD
                     LGIGRGDLALVRSPWMPSVLCEG"
BASE COUNT          234 a          474 c          452 g          268 t
ORIGIN      
        1 gcctggatcc cagccgctga atatctgaca ctctctgccc gtgtcgcgga aggttcctcc
       61 gtcagactgc acctgcccga cggctcgatg gtgccactca cgccacagcg gcaaccagaa
      121 gaggtcctgc cggcggtccg cgccttcgag cacgacacca cgaagctcct caccccggac
      181 gaggtgagat acgttggggt cattcgcggc cggcggctcg gtcccgatcc ggggccggtg
      241 ctccgcgagc tctcgactcc gctgctccat gtgcttgcga tggcgacctg gcgctgcgtc
      301 agtggggcgc gctgcccctc gccatccggt gagctccttg cgcctgaggg ccgctgggcc
      361 acactggaag ccgcattgca gggagacacg gttcgagtgc ggtggccact acagattgcc
      421 gtcatggaca ccctgccgct catcaccgag ttcgacgacg acacaacggg cagcggccag
      481 accgatagtc ttactcccgg cagagcaact cccggcgggg cgtacgaatg gtttttcccc
      541 accggcactc gcgcactcgt ctcggcgcgc atcaatgaag atttgcgcat ccggctctcg
      601 cctagtgcgg atgcctgggt tcccgcagcc gacgctcggc cgctcgcccc ggggctgcct
      661 gcgccacacg ccgtggtaag ctcgatctcg gtgacgcccc gatccgatcg agttgctctg
      721 cgaatcccgc tcaccgcgcg aattccgttt caggtgtcgg aggccgatcg gagtctgacc
      781 atccgattct atggtgccgc gggagacgtg gactggattc gctatggcag cgatgcactg
      841 gtgaagcgag tcagttggga tcaggtgagc agggacgagt tgacgcttac tgctgaactg
      901 acgcagccgg tgtggggcta tcgcgcccgc tggagtcgta acgacctgat cttcgagatt
      961 cgccggcctc cctccatacg gcgaaacaat cccctgcgcg gccgggtgat tgccgtggat
     1021 ccgggacatc ctccgctggg agcgactggg cctaccggat tacgggaggc ggacgcgaac
     1081 ctggccgtgg cattgaaact caggagcctt ctggaagctg ctggtgccca cgtcatcatg
     1141 acccggacga ccgactccgc cgtggacctg tggtctcggg tgtcgctggc cgagcggagc
     1201 ggtgccgagc tcctggtgtc gattcataac aatgccttgc ccgatggagt gaaccccttc
     1261 acgaacaatg gcaccagcgt attctataat accccccgga gtctgccgct cgcctcggag
     1321 gtccaaaagg cgttggtaca ccgcttgaag ctgcccgacc tgggcattgg ccggggcgac
     1381 ttggcactgg tccgctctcc ctggatgccc tccgttctct gcgaagga
//
LOCUS       DASRPQ010000797         1549 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2613416, whole genome shotgun sequence.
ACCESSION   DASRPQ010000797 DASRPQ010000000
VERSION     DASRPQ010000797.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1549
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2613416"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1549)
                     /locus_tag="VFD73_09180"
     CDS             complement(<1..>1549)
                     /locus_tag="VFD73_09180"
                     /inference="COORDINATES: protein motif:HMM:NF014731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HZI74178.1"
                     /translation="VLGVLSLILWSLIVVISIKYCTFILRADNRGEGGIIALLALLGV
                     RRVAPGSWRVHLVVMGLVGTSLLYADGAITPAISVLSAVEGLTVDAHGFEHYVVPITV
                     VILIGLFSVQRMGTAWIGQIFGPFMLFWFVVLGLLGLGSIVRAPGVLAAINPYYALSY
                     ILDAGPVLTLAVLAAVFLSVTGGEALYADMGHFGRFPIRAAWFTVVLPALVLNYFGQG
                     ALLLTEPAALRNPFYELAPNWLHYPLVLLATVATVIASQAVITGAFSLTQQAIQLGLL
                     PRLRVIQTAGEEKGQIYIPFINWGLAVLTLGAVLGFGSSSKLAGAYGLAVSLDMVITT
                     ILATFVALHWGHRPVLVYLLNGSLLLVDLMFFAANTTKLFEGGWLPLLIASTVAFVML
                     TWRKGQQLLKEARSHMRVSTDEFLERLCANPPIRVPGTAIVLASSPKGVPRSLLHHLK
                     HNRVLHEQLIIVSVIVTDEPHAADAEHLKLVPVGEGIARLIVHIGFMDKPNVPAAIQL
                     AVERGLLP"
BASE COUNT          348 a          462 c          521 g          218 t
ORIGIN      
        1 gggcagtaat ccgcgctcga ccgcaagctg gatggcggcc gggacattcg gcttgtccat
       61 gaagccgatg tgaacgatca agcgcgcaat gccctcacca accgggacga gcttcaggtg
      121 ctcggcgtca gccgcgtgcg gctcgtcggt gacgatcacc gaaacgatga tcagctgctc
      181 atgcagcaca cgattgtgct tgaggtgatg cagcaggctg cgcggcacgc ccttgggaga
      241 agaggccagc acaatggccg tgcctgggac gcgaatgggc gggttggcgc aaagccgctc
      301 caggaactcg tcggtcgaga cccgcatgtg actgcgcgcc tccttcagga gctgctgccc
      361 ctttcgccag gtcagcatga caaaggccac cgtggaggcg atcagaagcg gcagccagcc
      421 gccctcgaac agcttggtcg tgttcgcggc aaagaacatc agatcaacga gcagcaatga
      481 gccgttcagg agatagacca ggactggcct gtgcccccag tggagagcca caaaggtcgc
      541 gaggatcgtg gtgatcacca tatcgaggga tacggctaag ccgtaggctc ccgccagctt
      601 gctggacgag ccgaagccaa gaaccgcgcc caaggtcagg acggcgagcc cccagttgat
      661 gaagggaatg tagatctggc ccttctcctc cccggctgtc tggatcacgc gcagccgggg
      721 caagaggccg agctggatgg cctgctgggt gagcgagaac gcccccgtga tcacggcctg
      781 cgaggcaatc acggttgcga cggtcgcaag aagcacgagc gggtagtgca gccaattggg
      841 cgcgagttcg taaaacgggt tcctgagtgc ggccggctcg gtcagcagca gggcaccctg
      901 accgaagtag ttgagcacca acgcaggcaa cacgaccgtg aaccaggcgg cacggatcgg
      961 gaaccggccg aagtggccca tgtcggcata gagcgcctct ccccccgtga cggacaggaa
     1021 cacggccgca agtacggcca gggtgaggac cgggccggca tccaggatgt aggacagcgc
     1081 atagtaaggg ttgatggcgg ccagaacgcc aggcgctctc acgatgctgc ccaggccgag
     1141 aaggcccagc accacgaacc agaacagcat gaacgggccg aagatctggc cgatccatgc
     1201 tgttcccatc cgctggacgg agaacagccc gatcagaatg acaaccgtga tcgggacgac
     1261 gtagtgctcg aagccatgag catcgaccgt gaggccctca acggcgctga gcaccgaaat
     1321 ggcgggggtg atcgccccgt cagcgtagag cagggatgtg ccgacaaggc ccatgacgac
     1381 gaggtgcacg cgccacgacc ccggggcgac gcgcctgacg ccgagcagcg cgagaagtgc
     1441 gatgatgccg ccttctcctc tgttgtcggc gcgtagaatg aaggtgcagt acttgatcga
     1501 gatcacgacg ataagggacc agaggatcag ggagagaacg cccagaacg
//
LOCUS       DASRPQ010000798         1753 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1033988, whole genome shotgun sequence.
ACCESSION   DASRPQ010000798 DASRPQ010000000
VERSION     DASRPQ010000798.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1753
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1033988"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            40..>1753
                     /locus_tag="VFD73_09185"
     CDS             40..>1753
                     /locus_tag="VFD73_09185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74179.1"
                     /translation="MIIYRDQRSAAGTRTLLARACSALDELSATSSHQQIVEILIAIG
                     TLESALSDALFPEVDAVHPTIDLLRQASVAAGHMLWHSWHGRPHLINRWAGLASRALS
                     QAGGHVLPKQVEISVPEGYAYYGVYPEMYLEAAKVLAQPLQRSSAVCLGLRSIGSSLS
                     AVVAAALEELGWSVQSWTLRPRGHPFERTPRLAAELDQKLRSISDSRFLVIDEGPGIS
                     GSSFVGTGAMLRELGIPQDRITLFPSWRTEGGHLRSPAARDEWSSYEQVVTMFESVWL
                     ESGRLTQAFPGTLTDLSAGSWRQLVFESSACFPPVQPQHERRKYLLRPTERRSAAQQP
                     LLLKFAGLGSEARANVLRGKALAQAGFSPAPVDLCHGFMATPFLEGKPVPMGHTPGEF
                     LQRVAQYLAHLACANRAEPTVADAELREMTAVNLNEALDSEEFRRLERLLPRKWTEWP
                     VALDAKMQPHEWLQTPTGYVKTDAIDHHRDHFFPGCQDIAWDIAGAALELGLERSGRS
                     FLVGEYRRLSHDQAITQRLPHYAIAYLAFRIGYARLAVEVLGSAHEDGQRFHTQAERY
                     RRLLS"
BASE COUNT          338 a          522 c          553 g          340 t
ORIGIN      
        1 gcgacgggcc ggagcatccg ctagggccgc gctgtatcga tgatcatcta tcgagatcag
       61 cgatccgccg ccggcacccg cacgcttctc gcgagagctt gctccgcact cgatgagctg
      121 agcgccacca gcagccacca gcagattgtg gagatcctga ttgcaatagg aacgctggag
      181 agcgctctca gcgacgcact gttccccgaa gttgacgcag ttcacccgac catagacctg
      241 ctgcgccagg caagcgtcgc cgccggacac atgctgtggc acagctggca cggccggcct
      301 catctaatca acaggtgggc cgggctggcg agtcgcgcac tgtctcaggc gggcgggcac
      361 gtactgccga aacaggtgga gatcagcgtc cctgagggat acgcatacta tggcgtctat
      421 ccggagatgt acctcgaagc ggcgaaagtg ctcgctcagc ccctccagcg atcctctgcc
      481 gtgtgtctcg ggttgcgaag catcggatcg agtctgtccg cggtcgtggc ggccgcgctg
      541 gaggaactgg ggtggagtgt ccaatcctgg actctgcgtc ctcgagggca cccatttgaa
      601 cgcactccgc gactcgctgc agaactggat cagaagcttc gatcgatcag cgacagccgg
      661 tttctcgtca tagacgaggg cccgggaatc agcggctcct cgttcgtcgg aacgggagcg
      721 atgcttcggg aactaggaat tccacaggat cgtatcacgt tgtttcccag ttggagaaca
      781 gaaggcggcc acctgagatc gcccgcggca cgggatgaat ggtccagcta tgaacaggta
      841 gtcacgatgt tcgagagtgt ctggctggag tcgggacgtc tgacacaggc ttttcccggt
      901 acgctgaccg acctctccgc gggctcatgg cgccagctag tgttcgagtc gtccgcttgc
      961 tttcccccgg ttcagcctca gcacgagcgc cgaaagtatt tgctccgtcc gacggagagg
     1021 aggtcggcag cacagcaacc actactgctg aagttcgccg ggttgggttc ggaagcgaga
     1081 gccaacgtgc tccgcggcaa ggctctggcc caggctggat tttcgccagc tccggtggat
     1141 ctgtgtcatg gtttcatggc cacgcccttc cttgaaggaa agcccgtgcc gatgggccat
     1201 acgcccggtg agttcctcca gagagtagcc cagtatctgg cccatctggc gtgtgccaat
     1261 cgagctgaac ccacggtagc ggatgccgag ctgcgggaga tgaccgcagt caatctgaac
     1321 gaagcgttgg acagtgagga atttcgccgg ctcgaacggc tgctccctcg gaaatggacc
     1381 gaatggccgg tcgcgctgga tgccaaaatg cagcctcatg aatggctgca gactcctaca
     1441 ggatacgtga agacggacgc gatcgatcat caccgtgatc actttttccc tggttgtcag
     1501 gatatcgcct gggatattgc gggtgccgcg ctggagctcg gactggaacg atcaggccgg
     1561 agcttcttgg tgggtgagta ccgcagactg agccatgacc aggccatcac ccagcggctg
     1621 ccgcactatg cgatcgcata cttggcattc cggatcggct atgccaggct cgccgtggag
     1681 gtcctcggaa gcgctcacga ggatggtcaa cggtttcata cgcaggccga gcggtaccgt
     1741 cgcttacttt ccg
//
LOCUS       DASRPQ010000799         1133 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2288113, whole genome shotgun sequence.
ACCESSION   DASRPQ010000799 DASRPQ010000000
VERSION     DASRPQ010000799.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2288113"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            252..>1133
                     /locus_tag="VFD73_09190"
     CDS             252..>1133
                     /locus_tag="VFD73_09190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74180.1"
                     /translation="MSFRIRFGMVAAAVWIAACDRSPTAPPEPGSAPNTASLSRHTSE
                     RAAMDRLARRLARAMADPAFRSSVKRELDRSTFVEHKVQFQNFLRASGGKALKEVARL
                     SASPERAVEQDAASATALEMYFPVKAHRQAWSGGSDLLVASAWADGEAPVAYTVDGKR
                     QVLSAERAPATPVLAVEPVETDFSHTGQVTPQTTCTTCLPPPPPPPPPPPTGLFMTYS
                     HFVQDFEGWFKGDPEFEIHILGQSGTTDSLRDYQCAGAGAGGSYSFDQNNLDWSGSVL
                     LFSQYQLDNYRAGHPNQN"
BASE COUNT          210 a          390 c          333 g          200 t
ORIGIN      
        1 cgcagcacgc cacgttccgg ctcaagagcg gatgtcggcg gcggcacccg gtgctcgcga
       61 aaacgtattc ggggccgcag caccaggtta tcggcgtcgt cgtgttcgaa gcactgggtg
      121 acccgcgtca gagttttcca accccgcccg cgtagcgcag gtccgatcca accagcagca
      181 ggctcctacc ttggcgtggc catccggctc gcgcatgccg tcagcgcacg tcaacgaccc
      241 aaggaggagc catgtcattc agaatccgct tcggcatggt cgcggctgcg gtgtggattg
      301 ctgcctgcga tcgtagtccc accgcgcccc ctgagccggg gtccgcaccc aacacagctt
      361 ccctctcccg ccacacctct gaacgcgcag caatggaccg attggcgcgg cggctggccc
      421 gagcgatggc cgatccggct tttcggagct ctgtcaagcg agagttggat cgatcgacct
      481 tcgtggagca caaggtgcag ttccagaact ttctccgcgc ctccggcggt aaggccctga
      541 aggaggtagc ccggctgagt gcctcgcctg aacgcgccgt agagcaagac gccgcgagtg
      601 ccactgccct ggagatgtat ttccccgtca aagcacaccg ccaagcctgg tccggtggct
      661 ccgacctcct ggtcgccagc gcctgggcag acggagaggc gccggttgcg tataccgtcg
      721 atggcaagcg gcaggtgttg agcgccgaac gtgcgccggc aacccccgtg ctggcagtgg
      781 agccggtcga aaccgacttc tcgcatactg ggcaggtcac accccaaacc acctgcacca
      841 cctgtctgcc gcccccaccg ccccctcccc caccgccgcc aaccggtctc ttcatgacct
      901 attctcattt cgtgcaagac tttgaaggtt ggtttaaggg agaccccgaa tttgagatcc
      961 acattctggg tcagtccggc acaaccgact ccctgcgaga ctatcagtgc gcaggtgcgg
     1021 gtgcgggcgg atcctacagc ttcgatcaga acaatctgga ctggagcggc agcgttctgc
     1081 tgttcagcca atatcagctc gacaattatc gagccggcca ccccaaccag aac
//
LOCUS       DASRPQ010000800         2147 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1034207, whole genome shotgun sequence.
ACCESSION   DASRPQ010000800 DASRPQ010000000
VERSION     DASRPQ010000800.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2147
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1034207"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..956
                     /locus_tag="VFD73_09195"
     CDS             <1..956
                     /locus_tag="VFD73_09195"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HZI74181.1"
                     /translation="SNCPGRNSIAVAELVLGLLLSCDRRIPDQVADLRQGKWNKAEYS
                     KARGLYGRTLGIVGLGQIGREVAQRARAFGMRVIAWSRSLTHEEAEHLDVLYAQTPLE
                     IARKADAVTINVAATAETKHLVNADFLAAMRPGAYLINTSRGSVVDEAALQQAVRERG
                     IRAGLDVFQNEPAGGTGEFTSPLAQLPGIYGTHHVGASTDQAQVAIAHEVIRIVQAFR
                     ATGEVPNVVNRLAKSSATHVLTIRHRNRPGVLAHVFGVLAGAAINVEEVENIIYHGAH
                     ATLARIHLDGEPEDAALSRIREGNPDIISAELSAINGRGRS"
     gene            994..2112
                     /gene="serC"
                     /locus_tag="VFD73_09200"
     CDS             994..2112
                     /gene="serC"
                     /locus_tag="VFD73_09200"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HZI74182.1"
                     /translation="MSDRIYNFSAGPAVLPEPVLRKAQEAIWNVAGSGIGIMEHSHRG
                     KVFDRIIKEAEQACRDLAGIPDNYRVLFLQGGASLQFAMVPMNFLAPERTADYLVTGV
                     WSQKAVKEAKPIGKLHIAATSESTNFDRIPKAAEIKYSPSPVYVHLTTNNTIFGTQWR
                     TEPAVPSGVPLVADTSSDMYSRPIDVRKYGLIYAGAQKNLGPSGVVLVIIRDDLVEAG
                     AKNLPTMLQYRTHVAEGSLYNTPPTFGIYVMGEVFKWIQGEGGLSAMAEHNLSKARLL
                     YDYLDQSEFFRGTAQPDSRSLMNVCFRAPSEELEAKFISEATKRGLDGLKGHRSVGGM
                     RASIYNACPREAIEALVRFMKEFERANRTAARATQPAS"
BASE COUNT          411 a          683 c          673 g          380 t
ORIGIN      
        1 tctccaactg ccccggacgg aattccatcg ccgttgccga gctggtcctg ggcttgctct
       61 tatcctgcga ccggcgcatt cccgatcagg tggccgatct gcgacagggc aaatggaaca
      121 aggcggaata ttccaaggcc cggggcctct acggccgcac gctcggcatc gtcgggctgg
      181 ggcagatcgg cagagaagtg gctcaacgtg cccgggcctt cggcatgcgg gtgatcgcct
      241 ggtctcggag cctgactcac gaagaagccg agcacctcga cgttctgtac gcccagaccc
      301 cgctggagat cgcccgtaag gcggacgcgg tcaccatcaa cgtggcggcc acggccgaga
      361 ccaagcatct ggtgaacgcc gacttccttg ccgccatgcg gcccggtgcg tacttgatca
      421 atacctcccg cgggtcggtg gtagacgagg ccgcgctaca gcaggccgtc cgcgaacgag
      481 gcatccgcgc cggactggat gtgtttcaga acgagcccgc gggtggcact ggagagttca
      541 cttctcccct ggcccagctg cccggcatct acggcaccca tcacgtgggc gcctccaccg
      601 atcaggctca ggttgccatc gcgcacgagg tgatccggat cgtgcaggct ttccgcgcca
      661 ccggcgaggt tcccaatgtc gtgaaccgtc tggccaagag ctcggcgacg cacgtgctca
      721 ccattcggca tcggaatcgt ccgggtgtgc tggcgcatgt cttcggcgtg ttggcgggag
      781 cggctatcaa cgtggaggag gtggagaaca tcatctacca cggagcgcat gcaacgctcg
      841 cccggattca cctggacgga gagccggagg acgccgcgtt gtcccggatc cgggaaggaa
      901 accccgacat catcagcgcc gagctcagcg ccatcaatgg ccgcgggaga agttgagtcc
      961 gacgaccgtt accctctgac catcgatcac accatgtccg atcgcatcta caacttcagc
     1021 gcaggccccg cggttttacc cgagccggta ctccgaaagg cgcaggaggc catctggaac
     1081 gtggccggca gcggcattgg tatcatggag cacagccacc ggggtaaggt attcgaccgt
     1141 atcatcaagg aagccgagca ggcctgccgc gatctggccg gcattcccga caactatcgg
     1201 gtgttgtttc tgcagggcgg cgcttcgctt cagtttgcca tggtgccaat gaactttctc
     1261 gcgcctgagc ggaccgccga ctacctggtg accggcgtct ggtctcagaa ggcggtcaag
     1321 gaagccaagc caatcggcaa gctgcacatt gcggcgacga gtgagtccac caacttcgac
     1381 cgaattccca aggccgccga gatcaagtac tcacccagtc cggtgtacgt ccatctcacc
     1441 accaacaaca ccattttcgg aacccagtgg cggaccgagc cggcggtccc gagcggcgtg
     1501 ccgttggtcg cggatacgtc cagcgacatg tacagccgcc cgatcgacgt tcggaagtat
     1561 ggcttgatct acgcaggtgc ccagaaaaat ctgggaccct ccggagtggt gctcgtgatc
     1621 atccgggacg acctggtcga ggccggtgcc aagaatctcc cgaccatgct gcaataccgc
     1681 acccatgttg ccgagggctc gctctacaat acgccgccta ccttcgggat ctacgtgatg
     1741 ggtgaggtgt tcaagtggat tcaaggcgag ggcggtctca gtgcaatggc ggagcacaac
     1801 ctctcgaagg cacggctgct ctacgactat ctcgaccaga gcgagttctt ccggggcacc
     1861 gctcagccgg acagccgctc actcatgaat gtgtgcttcc gcgctcccag cgaggagctc
     1921 gaggccaagt tcatcagcga ggccaccaag cgcggtctcg atgggctgaa aggccaccgc
     1981 tcagtcggcg ggatgcgggc cagcatctac aatgcctgtc cgcgagaggc gatcgaggct
     2041 ctggtgcgct ttatgaagga gttcgagcgg gcgaaccgca cagcggctcg ggctacgcag
     2101 ccagcgtctt gatgagctcg ctgttggtct tggtgcgccg caggtca
//
LOCUS       DASRPQ010000801         1826 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_724725, whole genome shotgun sequence.
ACCESSION   DASRPQ010000801 DASRPQ010000000
VERSION     DASRPQ010000801.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1826
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_724725"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            71..1297
                     /locus_tag="VFD73_09205"
     CDS             71..1297
                     /locus_tag="VFD73_09205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007906821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
                     /protein_id="HZI74183.1"
                     /translation="MIDQGPIRERFTAIAPHLDERSRRLLAATEARAAGYGGIAAVSQ
                     ATGVAPSTIARGLQDLAAEDPLAPGRVRRPGGGRKPLADDDPTLRADLLELVEPDTRA
                     DPMSPLRWTCKSLRRLADELANRGHQVSRTVIGALLKAEKFSLQGNRKTREGSEHPDR
                     DAQFGHINTSVTTALAEQQPVISVDTKKKELVGDFKNPGRTWRPQGEPEEVQVYDFLS
                     RAIGRAIPYGVYDLAANDGWVSVGVDHDTAAFAVQTIRRWWPEIGRQRYPDARRLVIN
                     ADGGGSNGVRVRLWKRELQSLANELGMAIEVHHLPPGTSKWNKIEHRLFAFISQNWRA
                     TPLVSYRVMIDLISATTTKTGLSVCCELDPADYPRGIAVSDAEMQALNLVRDSFHGEW
                     NYTIQPQNMSDRAVIS"
     gene            1598..>1826
                     /locus_tag="VFD73_09210"
     CDS             1598..>1826
                     /locus_tag="VFD73_09210"
                     /inference="COORDINATES: protein motif:HMM:NF012580.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74184.1"
                     /translation="MLFGKTPTSTQVRGLVEWLDGHDDPLRIFATHALSAVYPPAADF
                     VEAACGLLATRLMRSRQEFVLWFRPELIQTVH"
BASE COUNT          342 a          552 c          606 g          326 t
ORIGIN      
        1 ccgtccggga acaaccgacc ggactgagtt gggggtttga ggttggatgc tgagacctat
       61 ttgtctccag atgatcgacc aaggcccaat tcgtgagcgc ttcaccgcga tagccccaca
      121 cctcgacgag cgatcccgtc gcctgttggc ggcgacggaa gcgcgcgcag ccggctacgg
      181 cggcatcgct gcggtgtcgc aggccaccgg cgttgcgccg agcacgatcg cgcgcggctt
      241 gcaggacctg gcagcggagg acccgctggc gccggggcgg gtgcggcggc cgggcggtgg
      301 ccgcaagccg ctggcggacg acgacccgac actacgggct gatctgctcg agctggtgga
      361 acccgatacg cgcgctgacc cgatgtcgcc attgcgctgg acctgcaaga gcctgcgtcg
      421 gctggcggac gaactggcga accgtgggca tcaggtcagc cgcaccgtca tcggtgcgct
      481 gctgaaggcg gagaagttca gcctgcaagg caaccgcaag acccgcgagg gtagcgaaca
      541 tcccgaccgg gatgcgcagt ttggccatat caataccagc gtgacgacgg cgctggccga
      601 gcagcagccg gtgatctcgg tcgacaccaa gaagaaggaa ctggttggcg atttcaagaa
      661 ccccggccgc acctggcgcc cgcagggcga gcccgaagag gtgcaggtct acgacttcct
      721 cagccgggcg attggccggg cgatcccgta tggcgtgtat gatctggccg caaacgatgg
      781 ctgggtcagt gtcggggttg accacgacac cgccgccttt gccgtgcaga cgatccgccg
      841 ctggtggccg gagatcggcc gccagcgcta tccggatgcg cgccgcctgg tgatcaacgc
      901 cgacggtggt ggcagcaacg gcgtgcgggt gcggctgtgg aaacgcgaac tgcaatctct
      961 ggccaacgaa ctcggcatgg ccatcgaggt ccaccacctg ccgcccggca ccagcaagtg
     1021 gaacaagatc gagcatcgcc tgttcgcctt catcagccag aactggcgcg ccacgccgtt
     1081 ggtcagctat cgggtcatga tcgatctcat cagcgccacc accaccaaga ccgggctgag
     1141 cgtttgctgc gagctcgatc cggcggacta tccgcggggc attgcagtgt ccgatgccga
     1201 gatgcaggcc ctcaacctcg tccgcgacag cttccatggt gaatggaact atacgataca
     1261 accgcagaat atgtcagatc gcgcggttat ttcctgacgg gcccttagcg cagttgagcg
     1321 gtgatctgga gattcttggt gaagtagctc cgcatatcca cggtgcctgg agcttcctgg
     1381 aatcggttcc ggaggatctg aagcaaaagg tacgggaccg gctggtgacg gttttgaaag
     1441 actatgtgct cgtccggaaa taactgagct ggcgaaaatt catttcagcc tggtttgcgg
     1501 cgcgaacttt ttgtcaatca tagcacttat ttcctgacgg gcccataata gctggctcga
     1561 tgccgcgggg gcggcactgg tgacgaacga ggatgtcgtg ctgttcggca agacccccac
     1621 ctcgactcag gtgcgcgggc tggtcgaatg gctggacggg cacgacgatc cgttacggat
     1681 ctttgccacg cacgcattgt cggcggtcta tccgcccgca gcggacttcg tggaggccgc
     1741 atgcgggctg ctggccacgc gactgatgcg aagccggcag gaattcgttc tgtggtttcg
     1801 cccggaattg atccagacgg tccact
//
LOCUS       DASRPQ010000802         1028 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1034452, whole genome shotgun sequence.
ACCESSION   DASRPQ010000802 DASRPQ010000000
VERSION     DASRPQ010000802.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1034452"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="VFD73_09215"
     CDS             <1..255
                     /locus_tag="VFD73_09215"
                     /inference="COORDINATES: protein motif:HMM:NF024767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI74185.1"
                     /translation="GHAEPTRALGQDTLQRGRQVLGPDHTTTLTAAAALTQALNQLGE
                     AELGRALGQDTLERSRRVLGPDNPLTQYVTQTVCTGHSSR"
     gene            553..>1028
                     /locus_tag="VFD73_09220"
     CDS             553..>1028
                     /locus_tag="VFD73_09220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74186.1"
                     /translation="MDEPRWTRIQQFARSWADASSPLSRKVEEVWLEFDVCLTQDTPN
                     HTPSVFFSIGDQDPQEPAPRRTPFSECLSAAEEGLQILGGRRTSSATRSTLVECFHRL
                     PSSARILFLGAMISRDTSTVRVVASGLSLDDILRYLQRLGVHDPVEHLPLISDISNL"
BASE COUNT          195 a          357 c          290 g          186 t
ORIGIN      
        1 ggccatgccg agccaacccg cgccctcggc caggacacgc tgcaacgcgg ccgccaagtc
       61 ctcggccccg accacaccac gacattgacg gcggccgccg ccctcactca ggccctcaat
      121 cagctgggcg aggcggagct cggccgcgcc ctcggccagg acacgctgga gcgcagccgc
      181 cgagtgctcg gcccggacaa tccgcttacg caatacgtga cgcagaccgt ctgcactggg
      241 cattcgtcca ggtaacggcg atgccgcgga cgaccatata caccgccggt agtctgcacc
      301 tgagctgagc caccaagtct cggaggtatt gtgagttcct acgcagcgtt cctgcgaccc
      361 ttcttgccct atattccgtc aggcctgata tctacacatt gcctggacgg ggtcctgtcc
      421 gttacgcaac atctgcccgc cgcgctcggc atcaacccgt tcatattcga atgcagtctg
      481 ggcagcaggc ccgtcgcgga cttttccgtg gtagctctgt catcgcgtgg cgatccggtc
      541 cggctcggtt ccatggacga gccccgatgg acgcgaatac aacagttcgc ccgctcgtgg
      601 gcggatgctt cctcccccct gagccgcaag gttgaggaag tctggctgga gttcgatgta
      661 tgcctgacgc aagacactcc gaaccacacc cctagcgtgt tcttcagcat tggagaccaa
      721 gatcctcagg aacccgcacc gagaagaacg ccgttcagcg agtgcctcag cgcggcagag
      781 gagggcctgc agatactcgg aggaagacga acctcctcgg caacgcgctc gacactggtt
      841 gaatgcttcc atcgcctgcc cagctcggcc cgaatactct ttctcggcgc gatgatctca
      901 cgagacacga gtaccgtcag ggtggtcgca tccgggctga gcctggacga catcctccgg
      961 tacctgcagc gcttgggagt ccacgatccc gtggaacatc tcccactaat ttccgacatc
     1021 tcgaacct
//
LOCUS       DASRPQ010000803         1581 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4489572, whole genome shotgun sequence.
ACCESSION   DASRPQ010000803 DASRPQ010000000
VERSION     DASRPQ010000803.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4489572"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..239)
                     /locus_tag="VFD73_09225"
     CDS             complement(<1..239)
                     /locus_tag="VFD73_09225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74187.1"
                     /translation="MRIDVNCFVGAYPFRRVPGTSPESVLRACDRVGIDQAWVSHLPS
                     VFWRDPGAGNSWLYETAKRQERFRPVPAIHPGLAG"
     gene            complement(239..1039)
                     /locus_tag="VFD73_09230"
     CDS             complement(239..1039)
                     /locus_tag="VFD73_09230"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZI74188.1"
                     /translation="MLIDVHAHFLHDRSPRADWRERNASRLRAGERVGITVHVASILG
                     SWGATSPIYFPSPQDIEYGNDFLLQLQRSHPDRIRCYAVVNPNFQQHAVRELKRCLDA
                     GMVGIKLAASRRADDPLLDPICRFAEDRGVPVLHHIWQHRRRDYPGQEASDAVELGRL
                     AARHPQVNFLLAHIGGGGDWIHSLKAVQHLPNVFVDLSGSGVDGGMLEACLEQVGCER
                     LLWGCDLTIDTGWAKLRYLEQILSAPELELVKWRNAGRIFPPAALPND"
     gene            complement(1046..1219)
                     /locus_tag="VFD73_09235"
     CDS             complement(1046..1219)
                     /locus_tag="VFD73_09235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74189.1"
                     /translation="MSTRKPTVDDLDDIDDEDGVLEEEQAEKTDLDLPTEREDDVGLG
                     GIQGSLDQEKEER"
     gene            complement(1263..>1581)
                     /locus_tag="VFD73_09240"
     CDS             complement(1263..>1581)
                     /locus_tag="VFD73_09240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74190.1"
                     /translation="TLETMESVPVIDHLQRTGMRLLEGLLSLSREHADSITGVGGIPQ
                     MCFLHYSDETVSQAVTAACAHSGLLFKRSAYNFVSLAHDDVVVDRSLELLAEALSAVT
                     KPA"
BASE COUNT          299 a          521 c          483 g          278 t
ORIGIN      
        1 caaccggcga gtcccggatg gatcgctgga acggggcgaa atcgttcctg gcgcttcgca
       61 gtttcataga gccaggagtt gccggccccg ggatcgcgcc agaacacgct tggcaggtga
      121 ctgacccagg cctgatcgat cccaactcga tcgcacgccc gaagcaccga ctcgggggag
      181 gtcccgggca cccgccggaa cgggtaggca cccacgaagc agttgacgtc aatccgcatc
      241 agtcattcgg aagagcggcc gggggaaaga tccggccggc gttgcgccac ttgaccagct
      301 ccaactccgg agcgctcagg atctgttcca ggtagcgcag cttggcccac ccggtatcga
      361 tcgtcagatc gcagccccag agcagccgct cgcaccccac ctgttccaga cacgcctcca
      421 gcatgccgcc atccacccca ctcccggaaa ggtcgacgaa gacgttgggc aaatgctgca
      481 ccgccttcaa cgagtggatc cagtcccccc cgccgccgat gtgggccaac aggaaattca
      541 cttggggatg ccgcgcagcc agtcggccca gttccacggc gtcgctcgct tcctgtccgg
      601 gatagtcgcg gcggcgatgc tgccagatgt gatgcagcac gggaactccg cggtcctcag
      661 cgaagcggca gatcgggtcg aggaggggat cgtccgcccg gcggctggcg gccagcttga
      721 tgcccaccat gccggcatcg agacagcgct tcagctcgcg aacggcgtgc tgctgaaaat
      781 tgggattgac gacggcgtag caccggatcc ggtcggggtg ggatcgttgg agttgaagca
      841 ggaaatcgtt gccgtattcg atatcctgcg gcgagggaaa atagatcggg gaggtggctc
      901 cccagctgcc gaggatcgag gccacgtgca cggtaattcc aacccgttca ccggcccgga
      961 gccgactggc attccgttcc cgccagtcgg ctcgaggcga gcgatcgtga agaaagtgcg
     1021 cgtgaacgtc gatcagcacc ccgcgctacc tctcctcctt ctcctgatcc aggctgccct
     1081 gaatccctcc gagtccaaca tcatcctccc gctccgtagg aagatcgagg tcggtcttct
     1141 cggcttgctc ctcttccagc acgccgtcct cgtcatcgat atcgtcgaga tcgtcgacgg
     1201 ttggcttccg tgtcgacatg tgactctcct gtgtgcgtca gcgcaagacc tccgctccca
     1261 atctaggcag gtttggtcac tgcagagagg gcctcggcaa gcagctcgag cgatcggtcg
     1321 accaccacgt cgtcgtgtgc cagcgatacg aagttgtagg ccgatcgctt gaagaggagg
     1381 ccgctgtggg cgcaggccgc cgtcacggcc tgggaaacag tctcgtcgct gtaatggagg
     1441 aagcacatct gcggaatccc ccctacgcca gtgatgctgt ccgcatgctc cctgctcaaa
     1501 gacagaagac cctcaagcag ccgcatcccc gtgcgctgga gatggtctat caccggcacc
     1561 gactccatcg tctcgagcgt t
//
LOCUS       DASRPQ010000804         1385 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4489893, whole genome shotgun sequence.
ACCESSION   DASRPQ010000804 DASRPQ010000000
VERSION     DASRPQ010000804.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1385
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4489893"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1385)
                     /locus_tag="VFD73_09245"
     CDS             complement(<1..>1385)
                     /locus_tag="VFD73_09245"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HZI74191.1"
                     /translation="LWGGTFHSIGARILRLHASLVGFRPDFTILDREDSTDLIKACLA
                     DADEKADASALPKADALAELFSMAANTRQSIAEMAGQIYRDFDLPASRFERLAAQYAE
                     RKRAANLMDFDDLMVQWLNLLQQHPEVAEAYQRRFQFILVDEYQDTNQLQSDLIDLLA
                     ARHQNVMVVGDDSQSIYSWRGANFRNIFEFPRRYPAARTYKIETNYRSTPEILALANA
                     AIAPNERQFSKVLTSARKPGAKPVLAVCGDAREQAAFVAQRALELNEEGVSLNGVAVL
                     YRSHFHALELQLELVRRKIPFSITSGIRFFEQAHIKDVAAYLKLVVNPTDELAFKRLV
                     QMLPGVGGKSADKIWKKFQADWTSRAVDAWNPEEPMAGDASAQAGEATPLASALQRCA
                     SIVPKKAATAWAELAITLSQIEVEPIRRKPASLIRHVLEAGYQQYLQNTFDKYNQRLD
                     DLEQLANFAQQ"
BASE COUNT          234 a          427 c          470 g          254 t
ORIGIN      
        1 actgctgggc gaaattggcc agctgctcga gatcgtccag gcgctggttg tacttatcga
       61 aggtattctg caggtactgc tggtagccag cctcgaggac gtggcggatc agcgaggccg
      121 gcttccgacg gatcggttcc acctcgatct gggaaagggt gatggccagc tcggcccagg
      181 ctgtggcggc ttttttgggg acgatcgacg cgcaacgctg caacgcggac gccagcgggg
      241 tagcctcccc cgcctgggcg gaggcgtcgc cggccatcgg ctcctccggg ttccaggcgt
      301 cgacggcccg cgaggtccaa tccgcctgaa acttcttcca aatcttgtcc gcgctcttcc
      361 cccccactcc cggcagcatc tgcacgagcc gcttgaacgc cagctcgtcg gtggggttga
      421 cgacgagctt caggtaggcg gcgacatcct tgatgtgggc ttgctcgaaa aaacggatac
      481 cgctggtgat gctgaacgga atcttgcgtc gaaccagctc cagctggagt tccagcgcgt
      541 ggaaatgcga gcggtaaagc acggccacgc cattgagcga gaccccctcc tcgttcagct
      601 ccagggcccg ttgggccacg aacgcggcct gctcccgggc atctccgcac acggccagca
      661 ccggtttggc cccaggtttg cgcgccgagg tcaggacctt cgagaactgc cgctcgttgg
      721 gggcgatggc ggcgttggcc agcgcgagga tctcgggcgt gctgcgatag ttggtctcga
      781 tcttgtaggt ccgggcggcc ggataccggc gcggaaattc gaagatgttc cggaagttgg
      841 cgccccgcca ggaatagatg ctctgggaat cgtccccgac caccatcacg ttctgatgcc
      901 gggcggccag caggtcaatc aggtcggatt ggagctggtt cgtgtcctga tattcgtcga
      961 cgagaataaa ctggaatcgg cgctggtacg cctcggccac ctccgggtgc tgctggagga
     1021 ggttcagcca ttgcaccatg aggtcgtcga aatccatcag gttggccgcc cgcttgcgct
     1081 cggcgtactg ggcagccaac cgctcgaagc gcgacgccgg cagatcgaag tcccggtaga
     1141 tctgcccggc catttcggcg atcgattgcc gggtgttggc cgccatggaa aagagttccg
     1201 ccaacgcgtc cgccttgggc agcgcggagg cgtccgcctt ctcgtccgcg tccgccaggc
     1261 aggccttgat cagatccgtg gaatcctccc ggtcgaggat ggtgaaatcg gggcggaacc
     1321 cgacgagcga ggcgtgcagg cggaggatgc gggcgccgat ggagtggaag gtgccgcccc
     1381 agagc
//
LOCUS       DASRPQ010000805         1501 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1982050, whole genome shotgun sequence.
ACCESSION   DASRPQ010000805 DASRPQ010000000
VERSION     DASRPQ010000805.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1501
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1982050"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..259
                     /locus_tag="VFD73_09250"
     CDS             <1..259
                     /locus_tag="VFD73_09250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HZI74192.1"
                     /translation="WRAAWMARQGKPLASAEGSMSKLVAGETAVRVTEQAIQILGGNG
                     YTRDYPVERWHRDAKIFTIFEGTSEIQRMIIGRAVTGLDVR"
     gene            645..1019
                     /locus_tag="VFD73_09255"
     CDS             645..1019
                     /locus_tag="VFD73_09255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74193.1"
                     /translation="MTPLNVKNTGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESASI
                     PVTLAVPSNAHSGEAYVILTAGGAHFDVRFSVGVSPPPECVAAGYKSPQGTSPLVFLW
                     LIVLVVIVLAAFWVRRRLAGRE"
     gene            complement(1117..>1501)
                     /locus_tag="VFD73_09260"
     CDS             complement(1117..>1501)
                     /locus_tag="VFD73_09260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74194.1"
                     /translation="PAGRLRPLAAIMDSVPETPDQQTRTAVTRRIIAHVRRGWPRLGE
                     PIVRHRERFCYVSAQLPGYREPAPILRLRYQGSADRWAIGIYLASSDRYTESELPTSL
                     GPKTGTPEEGVDDTFILYAGPKTGR"
BASE COUNT          252 a          456 c          526 g          267 t
ORIGIN      
        1 gtggcgcgcc gcctggatgg cccggcaggg taagccgctg gccagcgccg agggatcgat
       61 gtccaagctg gtcgcagggg agaccgcggt ccgggtgacc gaacaggcca tccagattct
      121 gggcggcaac gggtacacgc gcgactaccc ggtcgagcgg tggcaccgcg acgccaagat
      181 cttcaccatc ttcgagggca cctccgagat ccagcgcatg atcatcggcc gcgccgtcac
      241 cggcctcgat gtgcgatagc cctgacctgc gaaaactgcc gcactttagt ccgagacgaa
      301 tgacggtccg atccccggaa catgttcagg ctccaggccg attagcctgg tgatggttct
      361 cctggcggtg aaccaggcga gcttgctgag ctcggcgtca cctgcttgtc agggcgaccg
      421 ccggcagtcc gtggctacca gtgcggatcc aggctcttgc cgtgtccgaa gggacaattg
      481 tgaccgtaac tggactcagg cgcatgccag tggatatagc ggtaaggagt gtctgcagtc
      541 cgggatgagg agttccgggc aaccgacgga aactgaccgc gaggtgagac gtgaacccac
      601 tgatctgtat ccggggctcc gcctcccctg gccacagcta cccgatgact cccctgaacg
      661 tgaagaacac gggagactcc ccgatggagg tcacgtactc gaccaatccg gggtatgcca
      721 tgacgtggct gaaagtctcc ccggtcgaga tcctccccgg ggaatctgcg agcatccccg
      781 tgaccctggc agtcccgtcg aacgcacatt ccggggaggc ctacgtgatc ctgacggcag
      841 ggggtgccca tttcgacgtc aggttcagcg tcggggtctc ccctcctccc gagtgcgtcg
      901 cagccgggta taaatctccc cagggaacca gccctttggt gttcttgtgg ctgatagtcc
      961 tcgtggtgat cgtcctcgcg gccttctggg tacgcaggag gctggcagga agagagtgaa
     1021 ctcctcatgc gcgaaggact ctgtcgcgtt tacaggcagt gaccacactc actcgtcacg
     1081 cacgttggcg ccgggcgggg tgcgggctga gggccgtcag cgaccggttt tgggtcctgc
     1141 gtaaaggatg aaggtgtcat cgaccccttc ttcgggggtg ccggtcttgg ggccgaggga
     1201 agtcggcagc tcggactcgg tataccggtc gctgctggcc aggtagatcc cgatggccca
     1261 gcggtcggct gatccctggt agcgcaaccg caggatcggg gcaggctcgc ggtagccggg
     1321 cagctgggcg gagacgtagc agaatcgttc gcggtggcgg acgatgggct cgccgaggcg
     1381 gggccagccg cgcctgacgt gggcgatgat ccgccgggtg acggcggtcc gggtctgctg
     1441 gtcgggtgtt tctggcacgc tgtccatgat ggcggcgagc gggcggagcc gcccggcggg
     1501 g
//
LOCUS       DASRPQ010000806         1090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3540995, whole genome shotgun sequence.
ACCESSION   DASRPQ010000806 DASRPQ010000000
VERSION     DASRPQ010000806.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3540995"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(143..403)
                     /locus_tag="VFD73_09265"
     CDS             complement(143..403)
                     /locus_tag="VFD73_09265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74195.1"
                     /translation="MPVSWKGTLVQYTGRLHRLHPRKSEVRIFDYVDHEVPVLVRMFE
                     RRLRTYRAIGYVRGESPVSGEEIRERTVEYDDEAVRYFGEGE"
     gene            complement(482..>1090)
                     /locus_tag="VFD73_09270"
     CDS             complement(482..>1090)
                     /locus_tag="VFD73_09270"
                     /inference="COORDINATES: protein motif:HMM:NF016724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HZI74196.1"
                     /translation="IGGGKRKPNGRLDVAMIQSLVRQGRVDDLVETYGHVIVDECHHV
                     PAVSFERVLSEIKARYVLGLTATPHRRDGHHPILEMQLGPVRFAVDPRSQAARRPFDH
                     RLIVRETAFRLDGSHTDAGIQSIYAALAEDEVRNRLILDDVLHALEERRSPILLTERR
                     DHLEYFAEQLRGFVRHLVVLQGGMTAKERRDIGAQLAAVPDG"
BASE COUNT          194 a          372 c          340 g          184 t
ORIGIN      
        1 cgcgccagtt ggaactccct gctgtcctgg ctgcgggagg tccaggcgtg ggggcaggcc
       61 ggggcggtgg agtaggggtg tgctactcca gggttggcgt ggcggagacc tcggcctgag
      121 acagtccgaa gcgcggcagg agtcactccc cctccccgaa ataccgaaca gcctcgtcgt
      181 catactccac cgtccgctcc ctgatctcct ccccgctgac cggcgactcg ccgcggacat
      241 acccgatcgc ccggtaagtt cgcagccgcc tctcgaacat ccgcaccagc acaggcacct
      301 catggtcgac atagtcgaag atccgcacct cggatttccg cgggtgaagc cggtgcagcc
      361 tccccgtgta ttgcaccagc gtccctttcc aggacacagg catcgccagc accaacgtat
      421 ccagccgccg atcgtcaaac ccttcgccga cgtagcggcc cgtcgcaagg acaaggcgct
      481 cctacccatc ggggacggcc gcaagctggg caccgatgtc tcgccgctcc ttggccgtca
      541 tgccgccttg cagcacaacc agatggcgga cgaacccgcg aagctgctcc gcgaagtatt
      601 cgaggtggtc ccttcgctcc gtcagaagga tgggagaacg gcgttcctct agtgcatgga
      661 gaacgtcatc caggatgagg cggttgcgca cctcgtcctc ggcaagcgcc gcgtagatgc
      721 tctggatacc ggcatcggtg tggctaccgt ccagcctaaa ggcggtctcg cggacgatga
      781 gcctgtggtc gaacggccgc cgtgccgcct gactcctggg atcgacggcg aaacgaacgg
      841 ggcccagttg catctccagg atgggatggt gcccatcccg gcggtggggt gtggcggtca
      901 agcccaagac ataacgggcc ttgatctccg agagcacgcg ctcgaaggaa accgctggga
      961 catggtggca ctcgtccacg atgacatggc catacgtctc gaccaggtca tcgacccggc
     1021 cttgccgcac caggctctgg atcatggcca cgtcgaggcg cccgttcggc ttgcgcttgc
     1081 caccgccgat
//
LOCUS       DASRPQ010000807         1564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3541787, whole genome shotgun sequence.
ACCESSION   DASRPQ010000807 DASRPQ010000000
VERSION     DASRPQ010000807.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3541787"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..210
                     /locus_tag="VFD73_09275"
     CDS             <1..210
                     /locus_tag="VFD73_09275"
                     /inference="COORDINATES: protein motif:HMM:NF042466.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyltransferase beta-barrel
                     domain-containing protein"
                     /protein_id="HZI74197.1"
                     /translation="NWLADPLNPGDRCEVQVRYRARGTAAEVIERGSGSLSLVLETPV
                     RAITPGQSAVLYDRGGKVLGGGVIR"
     gene            213..611
                     /locus_tag="VFD73_09280"
     CDS             213..611
                     /locus_tag="VFD73_09280"
                     /inference="COORDINATES: protein motif:HMM:NF015953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HZI74198.1"
                     /translation="MRSLFLHWILNAAALWVAAAIVPGLGFSGGPGRLLLVAAVFGIV
                     NSTLRPLLTILTCPLIVLTLGFFSLVLNALMLLVTGWLSESWKLGFTVSGFWAAFFGG
                     LVVGLVSMLLSLGLKEKKSSVVSHQSSDRG"
     gene            complement(695..>1564)
                     /locus_tag="VFD73_09285"
     CDS             complement(695..>1564)
                     /locus_tag="VFD73_09285"
                     /inference="COORDINATES: protein motif:HMM:NF013705.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HZI74199.1"
                     /translation="DGMPRRPPGAGRSTGPAPGDMGGQNFDFGDLGGLGDIFSSIFGR
                     GRREESRADTLEAVVEVPFRVAMLGGKVPVTLPITESCPTCSGSGGAPGATWSTCPEC
                     QGRGTISFGQGNFAVNRPCPQCRGRGRIPSEKCPTCRGAGEIRAERRVTITVPPATET
                     GDRVMLRGQGQGSAAGQPAGDLVITFQVQPDRFFRREGLDIIADVPINLAQAALGTRL
                     RVRTLDGKKVLLRIPPGTQSGRRFRIKGQGIEKNGRRGDQLVGVQVTIPDELTQEQQE
                     LMKKFADSAGLKY"
BASE COUNT          243 a          529 c          478 g          314 t
ORIGIN      
        1 aactggctgg ccgatcccct caatcccggt gaccgctgcg aggtgcaggt gcggtaccgg
       61 gcacggggaa ccgctgccga ggttatcgag cgcggatccg gaagtctgag cctcgtcctg
      121 gaaacgccgg tgcgagcgat caccccaggc cagtcggccg tgctctacga tcggggtggg
      181 aaggtcctgg gcggcggcgt aatccgctaa cggtgcgatc tctcttcctt cactggatac
      241 tcaacgcagc ggctttgtgg gtcgccgctg ccattgttcc gggtctcggc ttctccggtg
      301 gcccgggaag gctgctgctg gtcgcggcgg tgttcggcat cgtgaacagc acgctgcggc
      361 cgctgctcac catcctgacc tgtccgctga tcgtgctcac gctcgggttc tttagcctgg
      421 ttctcaatgc attgatgctg ctggtgaccg gctggttgtc cgagagctgg aagctcggat
      481 ttaccgtgag cggcttctgg gccgcgttct tcggaggact ggtggtgggg ttggtgagta
      541 tgctgctgtc gctgggtctg aaagagaaga agtcctcagt tgtcagccac cagtcgtcag
      601 atcgcgggta gctgatctca aactccaatc cgaacgaact ctcctacgtc tgacgactga
      661 cgaccgacgc ctgtggaccg acgactgacc actcctagta cttcagcccc gccgaatcgg
      721 cgaacttctt catcagctcc tgctgctcct gtgtcagctc gtctggtatc gtcacctgca
      781 ctccaaccag ctgatcacct cgccggccgt tcttttcgat tccctgcccc ttgatccgga
      841 atcggcgtcc cgactgagtg ccgggaggaa tccgcagcag aactttcttc ccgtcgagcg
      901 ttctgacccg gagccgggtc cccaacgcag cctgggccag attgatcggt acgtcggcga
      961 tgatatccag gccctctcgc cggaagaacc ggtcaggttg cacctgaaag gtgatgacca
     1021 gatctcccgc gggctgtccc gccgcgctcc cctgcccctg accccgcagc atcacacgat
     1081 cgcccgtctc ggtcgccggc ggcactgtga tggtcactcg gcgttcggcg cgaatctcgc
     1141 cggctcctcg gcaggtgggg catttttcgg aggggattcg tccccgcccg cgacactgcg
     1201 ggcacgggcg gttcaccgcg aagtttccct gaccaaatga gatggtgcct ctcccctgac
     1261 attccgggca agtggaccag gtcgccccgg gcgcccctcc acttccactg caggtcgggc
     1321 acgactccgt gatgggaaga gtgacgggca ctttcccgcc cagcatggcc acgcggaacg
     1381 gcacttccac caccgcctcc agcgtgtcgg cgcgactctc ttcccgcctg ccccgaccga
     1441 aaatcgagga gaagatgtcg cccaagccgc ccaggtcgcc gaagtcgaag ttttggcctc
     1501 ccatgtcacc cggcgccggt cccgtgctac gccccgcgcc cggaggccgg cgtggcatgc
     1561 catc
//
LOCUS       DASRPQ010000808         1194 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4168619, whole genome shotgun sequence.
ACCESSION   DASRPQ010000808 DASRPQ010000000
VERSION     DASRPQ010000808.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1194
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4168619"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..770)
                     /locus_tag="VFD73_09290"
     CDS             complement(<1..770)
                     /locus_tag="VFD73_09290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74200.1"
                     /translation="MTTSRTSYVYVGLAGETAPGRPVKSGLYRMAAGDHRWELVTRGL
                     PEAPTIRAIATHPEHAETVYVGTQLGPYRSPDHGEHWERLNISDHGLPVWSLLFDPHD
                     AKVLYAGYENCEIYRSEDGGEHWQQLPVTVRFPEVTVGPGANPAKRVLELAAHPANPN
                     EIYGAIEVGGIIRSLDAGEHWENMSHGQYLNDDTVDMHGVLVGRWRPGMVFAIGRAGL
                     FSSTDQGAHWASARLDPLNPRGQTYCRDIREVPGDPKT"
     gene            complement(825..>1194)
                     /locus_tag="VFD73_09295"
     CDS             complement(825..>1194)
                     /locus_tag="VFD73_09295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74201.1"
                     /translation="LGRRGELLLTLDNPANPIVALRNLTPYFWRRVGIVPYPVGATLG
                     RRSLDRALQQLGFDVVEEAAFMHCPRVLAVAMARFLERHAGERSQKRFLAALGAFERM
                     AEWPTRYVTGHFVAVKAVKR"
BASE COUNT          212 a          394 c          374 g          214 t
ORIGIN      
        1 atggtcttcg gatcccctgg aacctcgcgg atgtcgcggc agtaggtttg ccccctggga
       61 ttcagggggt cgagtcgggc gctggcccag tgcgcgccct ggtccgtgct gctgaacaag
      121 ccagcgcggc cgatggcgaa gaccatgccc gggcgccagc gcccgacaag cacgccatgc
      181 atatccaccg tgtcatcgtt caggtactgc ccatggctca tgttctccca gtgctcgccg
      241 gcgtcgaggc tgcggatgat accgccgact tcgatggccc cgtagatctc attggggttg
      301 gcgggatggg cggccagttc gaggacacgt ttggccgggt tggccccggg gcccacggtg
      361 acttctggga agcggacggt caccggaagc tgctgccaat gctcgccgcc gtcttcactc
      421 cggtagatct cacagttctc gtagcccgcg tacagcacct tggcgtcgtg aggatcgaac
      481 aacagggacc agacaggcaa gccgtgatct gaaatgttga gcctctccca gtgctcgccg
      541 tgatccgggc tgcggtaggg accgagctgc gtcccaacat acacggtctc ggcgtgctcg
      601 gggtgcgtgg caatcgcccg gatggtgggc gcctcgggta ggccacgagt cacgagctcc
      661 caccgatgat cgcccgcggc catgcggtag agaccggatt tgacggggcg gcctggtgcg
      721 gtctcacccg ccagacccac atacacatac gacgtgcgac tcgtagtcat cgcgcgctcc
      781 ttcctgctgg catgatggga ctacgcaccg tgcaatagtg atgctcaccg cttgaccgct
      841 tttaccgcga caaagtggcc ggttacatat cttgtcggcc actccgccat gcgctcgaag
      901 gcgcccaaag cggccaagaa tctcttttga ctccgctcgc cagcatgcct ttccaagaat
      961 ctggccatgg cgacggcgag aactcgaggg caatgcatga aggccgcctc ctccacgaca
     1021 tcgaagccca actgctgtag ggcccggtcc aagctcctgc gcccgagcgt cgccccgacg
     1081 ggatacggga caatgccgac ccgccgccaa aagtacggag tcagattgcg taacgccacg
     1141 atggggttcg ccggattgtc cagcgtcagc agcaactccc cccgccgccc gagg
//
LOCUS       DASRPQ010000809         1829 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4491561, whole genome shotgun sequence.
ACCESSION   DASRPQ010000809 DASRPQ010000000
VERSION     DASRPQ010000809.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4491561"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..196
                     /locus_tag="VFD73_09300"
     CDS             <1..196
                     /locus_tag="VFD73_09300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74202.1"
                     /translation="LLAQQLLAAGERVLDVPPKLGARVRLLATGDINKNDRAPRGVLL
                     YRPRSGQRLEEVSLDLMAYS"
     gene            650..>1829
                     /locus_tag="VFD73_09305"
     CDS             650..>1829
                     /locus_tag="VFD73_09305"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase/maturase family protein"
                     /protein_id="HZI74203.1"
                     /translation="MQDAAVVLAVLRERGRKGLPCTQLYRQMFSKSLYLLAYGNIYSN
                     QGAMTPGACGDTADGMSEGKIDQIIELMRHERYRFSPARRICIPKKNGKLRPLGLPSW
                     SDKLVGEVVRLLLEAIYEPRFSDRSHGFRKGRGCHTALRKIQDTWTGTTWFIEGDISG
                     CFGKIDHGALLGILAEKIRDQRFLRLIRHMLKAGYLEDWEYHDTLSGTPQGGVVSPIL
                     SNIYLHKFDEFVERETIPRYTRGTGRSPNPVYKETENRLKRARRHGDRAQARELRLQL
                     RALSSKDPMDPGCRRLRYIRYADDVLLGFIGPKAEAEQVKAELARFLRETLALELNQD
                     KTLITHARSQRARFLGYQIAVQHSDTKLTNGQRPANGKIALHVPPDVIKAKCAPYRQH
                     G"
BASE COUNT          386 a          557 c          601 g          285 t
ORIGIN      
        1 cctgctggcc cagcagctgc tggccgccgg ggagcgggtg ctggatgtgc cgcccaagct
       61 cggtgcccgg gtgcggctgc tggccaccgg ggacatcaac aagaacgatc gtgcgccacg
      121 aggcgtactg ctatatcgcc cgcgaagcgg gcagagactg gaggaggtgt ctttggatct
      181 gatggcttac tcgtgacccg aaagggtccc ggggaatgca gcatgccaga aaaccggcgg
      241 tcgcgtccag gtatcaggag cggcgcgccg ggagatccgc gcgatatggt gaaagctgga
      301 ttgcttaaag cccagtctcc agagggcgca atttgtcgcc tgccggaaat gatgcctgta
      361 accggtaccg gcccctgccg caggataggg tcgtgcctgc ggtaatcctc cggggcgctg
      421 gagcgatgcc ctgtcagggc attcaaggag tcgaacgggc cacctaaatc gcgctagcac
      481 gtatagcggt acgaacgtgg gatcacctaa gggacgcaag tcctatggtg gcggagtgcc
      541 cgtagtagtc gccggggtaa cgtccggcca atctggagac cgctaataac ggtccacagg
      601 gcgaaggggc acaggcgatg aacaggtatc aggccaggag gtatgcgtaa tgcaggacgc
      661 cgcagtggtg ctggccgttc tccgcgagcg cggcaggaaa ggcctgccgt gcacgcagct
      721 gtaccggcag atgttcagca agagcctgta cctgctggcg tacggcaaca tctactccaa
      781 tcagggtgcg atgacgccgg gcgcctgcgg ggacaccgcc gacggcatgt ccgagggcaa
      841 gatcgatcag atcatcgagc tgatgcggca cgagcggtac cggttctccc cggcccgccg
      901 catctgcatc ccgaaaaaga acgggaagct ccgcccgctg ggcctgccgt cgtggtccga
      961 taagttggtc ggcgaagtgg tgcgcctcct gctggaggca atctacgagc cgcgcttttc
     1021 tgaccggtcg cacgggttcc ggaaaggacg cggctgccat accgcgctcc ggaaaatcca
     1081 ggacacctgg accgggacca catggttcat tgaaggagac atctccggct gcttcggtaa
     1141 aatcgaccat ggtgctcttc tcggaatact ggcggagaag atacgcgacc agcggttcct
     1201 ccggctgatc cggcacatgc tcaaggccgg gtacttggag gactgggaat atcatgacac
     1261 gctgagcgga accccgcaag gcggcgtggt atcaccgatc ttgagtaata tctacctgca
     1321 caaattcgac gaattcgtcg agagggaaac catcccgcga tacacgcgag gaaccggccg
     1381 gtctccgaac cccgtataca aggaaacaga gaaccggctg aagcgggcgc ggcggcacgg
     1441 cgaccgggcg caggcccggg aattgcgcct ccaactgcgt gccctttcct caaaggaccc
     1501 gatggacccc ggctgccggc ggctccggta tataaggtac gccgacgacg tactgctggg
     1561 atttatcggg ccgaaggccg aagccgagca ggtcaaggcg gaactggcca ggttcttgcg
     1621 ggagaccctc gcactggaac tgaaccagga caagaccctg atcacgcacg cccgcagcca
     1681 gcgggcccgc ttcctcggct accagatcgc cgtccagcac agcgacacga aactcaccaa
     1741 cggccagagg ccggccaacg ggaagatcgc gctgcacgtg cccccggacg tgatcaaggc
     1801 caaatgcgcc ccctaccggc agcacggca
//
LOCUS       DASRPQ010000810         1362 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1983187, whole genome shotgun sequence.
ACCESSION   DASRPQ010000810 DASRPQ010000000
VERSION     DASRPQ010000810.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1362
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1983187"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     regulatory      complement(183..257)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
     gene            632..>1362
                     /locus_tag="VFD73_09310"
     CDS             632..>1362
                     /locus_tag="VFD73_09310"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HZI74204.1"
                     /translation="MLRLRTLGGLTIEDENGPLAGPIARKRSLALLALVGLSTEQGLS
                     RDRVLAFLWPESDTERARNNLKQTLFQLRQDLHEDVFVRSPGVLRLDSTAISVDACDF
                     QAALERDNPTTAVTLYRGPFLDGFYLPALAEFERWVESERARLAQRYAGALEALANSA
                     ARLGDVHGAADWWRRLAAVDPLSSRYALGLMRALVQAGDRAAALDHARGYEELLHTEL
                     DSAPEPEVVEYVKHLRGMFGRWTAGP"
BASE COUNT          225 a          454 c          449 g          234 t
ORIGIN      
        1 cggagcaccg ggctgagttg aacgctgatg tgaagcggga gcctgcaggc ggccggatcc
       61 tgccgacgag cgcggaggga tcccgaccga aaagcggagg cgcaaaccaa cgacgggccg
      121 caagaagaca tatcgacctg attgctcgag acacgcgagg agcccgctcc agacgagtgc
      181 tcctcagcag ccaggccgtc tcggagagac ccagggcttt gcggaccggc ctcgcggccg
      241 gggtgccgat gatcggtgct tcggtttttc ggaggtgttt ctacggtgaa agcgctgcac
      301 cactcacacg actgctcggt gcctcacagc tcactccgca ccactgcccg ctaatcccct
      361 tctcttcccc tgttggaatt gcgggctgtc actggagttt tctgcggcga cactgccgct
      421 aagatgtctc cggatttgcg ttgccgtaag gggtacccga tcgagcggtt gacctgcggc
      481 ggccctgaag agggaaaacc tgcgtcggag gaaccacacc agcggtccgg ctggaactga
      541 tcgtgttgtc tttcccgatt cggcgccgta acctatacgc tgtcggttag ctggcggtta
      601 taccgcagtt agaaagcgtg ctcaccccct gatgctgcgg cttaggaccc tcggcggtct
      661 caccatcgaa gacgaaaacg gaccgctggc gggtccgatc gcccgcaaac ggtcgctggc
      721 actgcttgcg ctcgtcggcc tgagcaccga acaggggctg agccgagacc gggtgctggc
      781 cttcctctgg cccgaaagcg ataccgagcg ggcccgcaac aacctcaagc agaccctctt
      841 ccagctgcgg caggacctcc acgaggacgt ctttgtccgc tcgcccggcg tgctccggct
      901 ggactccact gctatctcgg tggacgcatg cgacttccag gcggcgctcg agcgggacaa
      961 ccccaccacc gcggtcactc tctaccgcgg gccattcctc gacggcttct atctcccggc
     1021 tctggccgag ttcgagcgct gggtggagtc ggagcgggcc cgcctggctc agcgctacgc
     1081 cggagccctg gaggcgctgg ccaactccgc tgcccggctg ggcgacgtcc atggcgcggc
     1141 cgactggtgg cgccggctgg cggcagtaga cccgctcagc tccaggtatg cgttgggcct
     1201 gatgcgggct cttgtccagg cgggagaccg ggccgcagcg ctggaccacg cccggggcta
     1261 cgaggagctg ctccacaccg agctcgactc ggcacccgag ccggaagtgg tcgagtacgt
     1321 gaagcatctg cgcgggatgt tcggccgctg gaccgccggt cc
//
LOCUS       DASRPQ010000811         1076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1036073, whole genome shotgun sequence.
ACCESSION   DASRPQ010000811 DASRPQ010000000
VERSION     DASRPQ010000811.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1036073"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(73..387)
                     /locus_tag="VFD73_09315"
     CDS             complement(73..387)
                     /locus_tag="VFD73_09315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74205.1"
                     /translation="MTVRVLFPYGPRVSGRQRSKTVVKLEEARQAPRSRARQPPPVEP
                     DPLYGVVLLKTALELKRRKDGSVEEILRSVLSRMRIPEHEFRAFLEQREDLRRLLDVR
                     EG"
     gene            429..1070
                     /locus_tag="VFD73_09320"
     CDS             429..1070
                     /locus_tag="VFD73_09320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002640717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HZI74206.1"
                     /translation="MDYRYIVVEGPIGVGKTSLSHLLAERYKARRILEVVEENPFLSS
                     FYTDRQKYAFQTQIFFLLSRFRQQQEFFQQDLFSAVTVSDYLFAKDRLFAYLTLDENE
                     LALYDRVFEALGTRVTKPDLVIYLQARNDVLMSRIKKRGREFERKFDGQYLEDLCKAY
                     NEFFFHYSETPLLVINTSDIDFVNNEEDLGNLLSVIRKHKKGIQHYIPISSKR"
BASE COUNT          199 a          360 c          321 g          196 t
ORIGIN      
        1 gacctgtgag tccagaccgt ggtcccgtgt tgggtgctgg ctcggagatc cccggaagca
       61 gggtcccgag cctcaccctt ctcgaacgtc gagcagcctg cgcagatctt cccgctgctc
      121 caggaacgcc cggaactcgt gctcggggat gcgcatccgc gagagcacgc ttcggaggat
      181 ctcctccacg ctgccgtcct tgcggcgctt gagctccagc gccgtcttca gcagcaccac
      241 gccgtagagg ggatcgggtt ccaccggagg aggctggcgc gccctggatc gaggggcctg
      301 ccgggcctcc tccagcttta ctacggtctt cgaccgctgc ctcccgctca cgcgcggacc
      361 gtacggaaag agaacccgga ccgtcaagca ggcactcgtc cgcgatctgt gctatccgcc
      421 tgcgccggat ggactaccgg tacatcgtcg tcgaggggcc cattggtgtg ggcaagacga
      481 gcctctccca cctcctggcc gagcgctaca aggcgcgccg gatcctggag gtggtggagg
      541 agaacccgtt cctctccagc ttctatacgg accggcagaa gtatgcgttc cagacgcaga
      601 tcttcttcct gctctcgcgc ttccggcagc agcaggagtt cttccaacag gatctcttca
      661 gcgccgttac cgtcagcgac tacctgttcg ccaaggaccg gctcttcgcc tacctgaccc
      721 tggacgagaa cgagctggcg ctctacgacc gggtgttcga ggcgctgggg acccgcgtca
      781 ccaagccgga cctggtcatc taccttcagg cgcgaaacga cgtcctgatg agccgcatca
      841 agaagcgcgg ccgggagttc gagcgcaagt tcgacgggca gtacctcgaa gacctctgca
      901 aggcctacaa cgagttcttc ttccactact cggagacgcc ccttctggtg atcaacacct
      961 ccgacatcga cttcgtgaac aacgaggagg atttggggaa cctcctgtcg gtgatccgga
     1021 agcacaagaa gggcatccag cattacatcc ccatcagctc gaagcgctga caggga
//
LOCUS       DASRPQ010000812         3458 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3542041, whole genome shotgun sequence.
ACCESSION   DASRPQ010000812 DASRPQ010000000
VERSION     DASRPQ010000812.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3458
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3542041"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1283
                     /locus_tag="VFD73_09325"
     CDS             <1..1283
                     /locus_tag="VFD73_09325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HZI74207.1"
                     /translation="MRPATLDEFVGQQHLLGPGKPLRDAIERGTPGSMIFWGPPGSGK
                     TTLAHLVASSTERVFVPFSAVTEGVPRIREILNEARARLEAGGPETILFIDEIHRLNK
                     AQQDSLLPPAEDGTITLIGATTENPSFEVIGALLSRTRVFVLNPLSTEDIELLVQRAV
                     EDPERGLGAMQLVVEPDALRMMSSEADGDARRALTVLEAAAAHVGARGTVTVEVAKEA
                     MQRRFARYDKAGEEHFNLLSAYHKSLRGSDPQGALYWMARMLDGGEDPMTLFRRAIAM
                     AAEDIGLADPHALVVAVAARDAFHMLGPPEGYLPLAEMTIYLATAPKSNSSKVALGAA
                     LDAARTSPAAPVPLQIRNAPTPLMKELGYNKGYQYAHNSPDAYLPQEYLPDQLRDALF
                     YIPGQFGYEKKVAERLEWWAKLKRGETGGDTPDR"
     gene            1404..1841
                     /locus_tag="VFD73_09330"
     CDS             1404..1841
                     /locus_tag="VFD73_09330"
                     /inference="COORDINATES: protein motif:HMM:NF015147.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LEA type 2 family protein"
                     /protein_id="HZI74208.1"
                     /translation="MACAGLGDNFKEPSVELDHAVIRGLGLAGGSLDLIVNIQNPNNF
                     TLQADKLQLGIDVEGSHLGDITYDDDFAVTQNGRTTLTLPLRFGWFGVGSAVRAALGY
                     GDLPYTMKGQATLKLPGGAHTVVSFTHEGRAPLTRPTSSAGSP"
     gene            1899..3182
                     /gene="hflX"
                     /locus_tag="VFD73_09335"
     CDS             1899..3182
                     /gene="hflX"
                     /locus_tag="VFD73_09335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HZI74209.1"
                     /translation="MLVAAPRKGSPDARHVAEHLEELTRLVDTAGAEVVGRISQHIVA
                     PNPATLIGEGKVEEVAAEVSTSEASLVIFDEELSPVQGANLERELNVRVMDRAEVILD
                     IFSTRARSHEAKLQVELAQLEYLLPRLTRMWTHLSRIRGGIGLRGPGETQLETDRRII
                     RRKIQGLKAKLKDVEKHRENLRSGRDPMLSVALVGYTNAGKSSILRGLSGQHEIVVED
                     RLFATLDTLTREVDLGEGQRARITDTVGFIRKLPHHLVASFRATLEEARAADVLLHVV
                     DASHPDWEGQLRVVEKVLAELGLADRPVILVFNKIDLVSDATGFSRRVRELYPTAIIT
                     TTMRTDGLASLKARLRELDRAGRITVRVRLGVGEGARLAELYREGEVLSREQEGEYYD
                     LVVRLEPSQAARLRQTGMNVSDAPAERMRLRKASG"
BASE COUNT          679 a         1081 c         1089 g          609 t
ORIGIN      
        1 gaatgcgtcc ggcaacgctc gatgagtttg tcggccagca gcaccttctc ggaccgggca
       61 agcctctgcg cgatgccatt gagcggggga cgccgggttc gatgattttc tgggggccac
      121 ccgggagcgg caaaacgacc ctggcgcatc tggtcgccag ctcgacggaa cgggtcttcg
      181 ttcccttcag cgcagtcacc gagggggtgc cccgaattcg tgagattctg aatgaggcgc
      241 gcgctcgact cgaggcaggc gggccggaaa ccattctgtt catcgatgag attcaccggc
      301 tgaacaaggc acaacaggac agcctgcttc ccccagcgga ggacggaacc atcaccctga
      361 tcggcgcaac caccgagaac ccgagcttcg aggtgattgg cgcgctgctc tcacggactc
      421 gcgtcttcgt gctgaacccg ctcagcacgg aagacatcga gcttctggtg cagcgagccg
      481 tggaggatcc tgaacgaggc ctcggtgcaa tgcagttggt ggtcgagcct gacgcgcttc
      541 gaatgatgtc ctcagaggcg gatggcgatg cccggcgggc gctcaccgtg ctcgaggccg
      601 ccgctgcaca cgtgggagcg cgcggaaccg tgacggtcga agtggcaaag gaggccatgc
      661 aacggcgctt tgcccgctac gacaaggcag gagaagagca cttcaacctg ctctcggcct
      721 atcacaagtc actgcgtgga agcgatcccc agggagcgct ctactggatg gcgcggatgc
      781 tcgatggagg agaggatccc atgacactct tccgccgagc catcgccatg gccgccgagg
      841 acattggact cgccgacccc cacgcgctgg tggtggccgt cgctgcgaga gacgcttttc
      901 acatgctggg cccacccgaa gggtacctgc cgctggccga gatgacgatc tatctcgcga
      961 cggcgccgaa gtcgaacagc agcaaagttg cgctgggcgc cgcattggat gccgcccgga
     1021 cctcccccgc cgctccggtt ccgctgcaga tccgaaacgc gccgacaccg ctcatgaaag
     1081 agctgggtta caacaaaggc taccagtacg cccacaactc gccggacgcc taccttccac
     1141 aggaatatct gccggatcag ctccgggatg ccctctttta tatcccgggg cagttcgggt
     1201 acgagaaaaa ggttgccgag cggctcgaat ggtgggccaa gctgaagcgg ggtgagactg
     1261 gaggcgacac acctgacagg tagcggtgtg acacagggca ctgtccttgc ggcaggaccc
     1321 tttcatcctg cgtgcaaggg ccaggtcaaa aaccttcggc tgtggaggcc tgtattcgca
     1381 cgtcgctaat cgccctggct gtggtggcct gtgccgggct gggtgacaac ttcaaggaac
     1441 caagtgtcga actcgatcat gctgtgattc gcgggctggg actcgccggt ggcagcctgg
     1501 acctgatcgt caacattcag aaccccaaca acttcacgct gcaagcagac aagctccagc
     1561 tcggcatcga cgtggaaggc tcccacctgg gcgacattac ctacgacgat gacttcgcgg
     1621 tcacccagaa tgggcggacc acgctcacgc tgcccctccg attcggttgg ttcggcgtgg
     1681 gaagcgctgt ccgagccgcg ctcggctacg gcgatttgcc gtacaccatg aaaggacaag
     1741 ccacgcttaa actgccaggc ggtgctcaca ccgtcgtttc cttcactcac gagggtcgtg
     1801 cgcctctgac acggcccacg agcagcgccg gatccccatg aaaggaaagg tcctctatta
     1861 gatcgctgat tccagtccgc gacccggtcg agcgcgtggt gctggttgcc gctccgcgca
     1921 aaggctcgcc cgacgcgcgg cacgtggcgg aacacctcga ggaattgacc aggctggtgg
     1981 acaccgccgg cgccgaggtt gttggccgca tttcccaaca catcgttgct cccaatcctg
     2041 ccaccctgat cggcgagggc aaggtcgaag aagtcgctgc cgaagtctcc acgtccgagg
     2101 cctccctggt catcttcgac gaggagctgt cgccagtgca gggagccaat ctcgagcgag
     2161 agctgaacgt ccgggtgatg gatcgtgccg aggtgattct ggacatcttc tcgaccagag
     2221 ctcggagcca cgaggcaaag cttcaggtcg agctggccca actggaatat ctgcttcccc
     2281 ggcttacccg catgtggacg cacttgtcac ggattcgcgg tggtatcggg cttcggggac
     2341 cgggcgagac tcagctggag acagaccgcc gaatcatccg tcgcaagatc cagggcctca
     2401 aggccaagct caaggatgtc gagaagcacc gcgagaacct gcgctcaggc cgggacccga
     2461 tgctgagtgt cgccctggtc gggtatacca acgccggcaa gtcgagcatt ctgcgcggcc
     2521 tctccggcca gcatgagatt gtggtggagg atcgcctctt cgccacgctc gacaccctga
     2581 cgcgagaggt agatctcggt gaaggccagc gcgcccgcat caccgacacg gtgggtttca
     2641 ttcgaaagct gccgcaccat ctggtggcga gctttcgcgc cacactggaa gaagctcgag
     2701 cggcggacgt gctgctccac gtggtcgatg ccagtcaccc ggactgggaa ggccagctcc
     2761 gggtggtgga aaaggtgttg gcagaactcg gtctcgcgga ccgtcctgtt atcctggtgt
     2821 tcaacaagat cgatctggtc agtgacgcca cggggttcag cagaagagtc cgcgagctgt
     2881 atccgacagc gatcatcacc actaccatgc ggaccgacgg tttggcctcg ctcaaggcgc
     2941 ggctgcgcga gctggaccga gccggcagga tcacggtacg cgtgcgcctc ggtgtcggcg
     3001 aaggcgccag attggccgag ctgtatcgcg agggggaagt gctgagccga gaacaggagg
     3061 gcgaatacta cgacctcgtc gtgcgcttgg agccttccca ggccgcccgt ctgcgccaga
     3121 ccggaatgaa cgtcagcgat gcgccggccg agcgaatgcg actcagaaag gcgagcggat
     3181 aataagcggc acagccgggc gggtagaaac agcaaagggc cacggctcaa agagctttgg
     3241 ccctttcctt acttaacgaa cctgtggtta ttccactgcc ccgctgcccc gctgccccgc
     3301 ttacctccct ccactcaaca cctgctccag gatgagccaa cggttcatcc cggcaaactt
     3361 ctggtgcatc ttggtcgagg gcggagttcc agcgagctcg tcttcctcga tctgcaggtc
     3421 tgcgagcgca tcgattccac tcttgaggaa cttccgta
//
LOCUS       DASRPQ010000813         1481 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4492190, whole genome shotgun sequence.
ACCESSION   DASRPQ010000813 DASRPQ010000000
VERSION     DASRPQ010000813.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1481
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4492190"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          286 a          444 c          453 g          298 t
ORIGIN      
        1 gctgctggag catccaacac tatggtcggt cgcgggattc gtgatccggc tggtgtgggc
       61 gcccatgtgt atctagatgt tggccatgtc ggagacgacg ggtcggcagc gcagcaccaa
      121 tttctggtca tggttgatca ggcgtcgggt ctgattgcag ctgccggact gcccaataga
      181 acggccgacg agatcgttgg cgccctgcat tcacactggg tgcgaccctt cggtccgccg
      241 gcgcaagtga ctgttgatgg agctcgtgag ttccagtcga tcgccatgcg aagctacttg
      301 gcacgatatg gcatcaagca catctcttcg agcccgtata acccttcggc caacattgcc
      361 gagtgcgctg tcaagaaaat caaggaggga ctgcgccgcg ccttgatgga cgcgagtcac
      421 gattcgatga tgacaggagt gggatggacc cagctcctcg acgctgtcac ccacaattgg
      481 aacgtcacag tgtccgaggc cacgggtaac tctccagcca tgttgttctt cgggcgagcg
      541 ctcagacacc ccgcggacgc cggagcatca ccacctgtga agctaggcgg ccatccgagg
      601 caatcgattg cgcagcgtct cgagacagca gactggactc gtgaaagggc tgctgaacgg
      661 cgggatatca cggctcgtcg acgcgcggct tattttgacc gtgcttcaca gcgcctggtt
      721 ctcccggacg gctcccttgt ggtcaagttc atccagcgga ccagtccgct gggtaagtgc
      781 atcgtgcgtc gcactgggcc gtacagggtg atttcccgcg tttcggactc caactaccag
      841 ttgtctaaca cagacgggac gccgatcgat gggcacacgc atgttcgttg gctggcgccg
      901 tacttcatgc catcgggcgg catcccatca catgatgtcg acatcagcgg cgccccagcc
      961 atggacctcg aggtcgagcc tccattggta gaggagccca ttgtcaggct tgggccacat
     1021 cccctcgggg tcgagcctcc cccgccagca cagcctgctg ttaggattga gccgcaaccc
     1081 attggggtcg agtctccatc gcgagcggtg ccggctacca gggttgagtc acagccacat
     1141 gagacggatg tgcctgcaca gatcccagca gatcctgtgc aagatccgtc tgcagctcct
     1201 ggccgagaag cggtcttacc agagccgcgc ccagctgggt caagtcagcc ggtcccgatg
     1261 aaatcagtcc gcgtctccaa gtggggtagc gttccctcac gctcgtctgc aagactcgcg
     1321 gagaaaaagc aagctcagga aagggcgtcg tcggcagacc gaggctaggc gggatgatgt
     1381 tatggaggct ccagcaaata cccctgctgt gacacacacc tgtgctattt gtggatgttg
     1441 tggcgcctct gcctgcctca tatatagggg cgcgctgctg c
//
LOCUS       DASRPQ010000814         1242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2290468, whole genome shotgun sequence.
ACCESSION   DASRPQ010000814 DASRPQ010000000
VERSION     DASRPQ010000814.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2290468"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..717
                     /locus_tag="VFD73_09340"
     CDS             <1..717
                     /locus_tag="VFD73_09340"
                     /inference="COORDINATES: protein motif:HMM:NF013895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HZI74210.1"
                     /translation="TPELDQEEVARLMARYNLPNVPVVNERGRLLGRVTFDDVIDVVE
                     AETTEDLLKFGGVSPDEELAAGWDTAVRSRLPWLSVNLATAFLAGGVVYSFQNTIQRT
                     LALAVWMPIIAGMGGNAGTQALAVTVRRLALGMLPVRVFTQVVGKEILVGIINGLAMG
                     VVVGIVASLMGEGPKLGLVVFLAMVGNLMVAGFAGAFIPILLERFGVDPAVASSIFVT
                     TFTDVCGFLLLLGLAGLLLL"
     gene            complement(783..1163)
                     /locus_tag="VFD73_09345"
     CDS             complement(783..1163)
                     /locus_tag="VFD73_09345"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding domain-containing protein"
                     /protein_id="HZI74211.1"
                     /translation="MKRIFSLVAAGVLAAAVPASGVVAQSTAPAKTPSSSMQHKQRTT
                     AVKSATQDSTATASKHMAKPKWTKDQIKQAQEGLEKAGYFKGTPNGVYGRRTRSAIKK
                     YQKANKLPVTGQLSDSLLTRLSSS"
BASE COUNT          203 a          346 c          406 g          287 t
ORIGIN      
        1 accccggagc tcgaccagga agaggtggct cggctgatgg cacgctacaa tctgccgaac
       61 gttccggtgg tcaacgagcg gggccgactg ctcggacggg tcaccttcga cgacgtgatc
      121 gatgtcgtcg aggcggaaac cacagaggac ctcctcaagt tcggcggcgt ctcgccggac
      181 gaagagctgg cggccggctg ggacacggcg gttcgaagcc gtctgccctg gttgtcagtc
      241 aacctggcaa ccgcttttct ggcgggcggg gtggtctatt cctttcagaa tacgatccag
      301 cggacactcg ccctggctgt ctggatgccg atcatcgcgg ggatgggtgg taatgccggc
      361 acgcaagcgc tggcggtgac ggtgcgccgt ctcgcgctgg gtatgcttcc ggtccgagtg
      421 ttcacccaag tggtcggaaa ggaaattctg gtcggtatca tcaacgggct tgcaatgggg
      481 gtcgttgtcg gcatcgtggc ctcgttgatg ggtgaagggc ccaagcttgg gctggtggtc
      541 tttctcgcca tggtgggtaa tctcatggtc gctggctttg ctggagcctt cattcccatt
      601 ctgctcgagc gcttcggggt ggacccggcg gtagcctcct ccatcttcgt gacgacgttt
      661 actgatgtct gcggatttct tctgctcctg ggtcttgcgg gattattgct gctctaaagc
      721 gagccgcccc tccggagagg ggcggaaatg aggcgagaga gtgctgcgga acaactacta
      781 catcaggatg agctgagtcg agtgagcaga ctgtcgctca actggcccgt aacgggcagc
      841 ttgttcgcct tctgatactt cttgatggca ctccgagtac gcctgccata cacgccgttc
      901 ggcgttccct tgaagtagcc ggccttttcc agaccttcct gtgcttgctt gatctggtct
      961 ttggtccact tgggtttggc catgtgcttc gaggccgtgg cagtggaatc ctgcgttgcc
     1021 gacttcacag cagtcgttct ctgcttgtgc tgcatgctgg agctgggggt cttggcggga
     1081 gcggtgctct gtgccacgac gccactcgca gggaccgccg ccgccagcac acccgcggca
     1141 acgagagaaa agattcgctt catcaggtcc tcctgacagt gacaaggtgt tgtgatctgg
     1201 atagggacca cttcggtcgg cgacctgaag ggcaatcggt at
//
LOCUS       DASRPQ010000815         1095 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1663487, whole genome shotgun sequence.
ACCESSION   DASRPQ010000815 DASRPQ010000000
VERSION     DASRPQ010000815.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1663487"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..931
                     /locus_tag="VFD73_09350"
     CDS             <1..931
                     /locus_tag="VFD73_09350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74212.1"
                     /translation="LSFEPATISKRRYPELFQQGETAFGHPIVDGQHPHDFFMEIAAL
                     YDYRFGDHSLLSFYAAPMGDPAMGPAAYPHRASASEDPTAPLGHHLQDSTHIAADVVT
                     VGITHHSLRLEASGFHGREPDEFRWNINSGKIDSWSARVTANPGQNWSLQYSIAQLHS
                     PEELAPAEHIRRVTASVQYNRPLPRGNWASLLLWGRNQDVAGGNVGNSYLLESSVQFL
                     DRNYAWTRIENVDRTNELLLGGAPEPPGFGERLFTRVQAYTAGYEREVGHIPHLSTAL
                     GGQLTWYGVPDVLQPIYGRHPVGGILFLRLRTQ"
BASE COUNT          191 a          345 c          343 g          216 t
ORIGIN      
        1 gctgagtttc gagccagcca cgatttccaa gcggcgctac ccggagctat tccagcaggg
       61 tgaaaccgct ttcgggcacc ccattgtgga tggccagcac cctcacgatt tcttcatgga
      121 gattgccgcg ctgtacgact acaggtttgg cgaccacagc ctgttgtcgt tctacgccgc
      181 tccgatgggt gatcctgcga tgggcccggc agcctaccct catcgggcct cggcgtcgga
      241 ggatcccacg gcgccgctcg gacatcacct ccaggattcc acccacattg cggccgacgt
      301 ggtcacggtc ggaatcacgc accacagcct gcggctggag gcctctgggt ttcacggacg
      361 cgagcccgac gagttccgct ggaacatcaa ctccgggaag atcgactcgt ggtcggcccg
      421 ggtcaccgcc aatcccggcc agaactggag cctgcaatat tccattgcgc agctgcacag
      481 cccggaggaa cttgcacccg ctgaacacat caggcgcgtg accgcgtcgg tgcagtacaa
      541 ccgtcctctg ccgcgaggta actgggcgtc gttgctgctt tggggcagga atcaggatgt
      601 tgcgggaggt aacgtgggca acagctatct gctggaatcg tcggtgcagt ttcttgaccg
      661 caactatgcc tggacacgca ttgaaaacgt ggaccgtacg aatgagctgc tgctcggcgg
      721 cgctcccgaa ccgcccggat tcggtgagcg gttattcacc cgggtgcagg cttacaccgc
      781 gggctatgaa agagaagtcg gccatattcc gcatctctcg acggcgctag gcggacaatt
      841 gacctggtac ggcgtgcccg atgtcctgca gccgatctac ggccggcatc cggtgggtgg
      901 aattttgttc ctgcgcctgc ggacgcagta agagtagttc gcgtaggccc ggacgtcgcc
      961 gtccgggcag ctcgcctgga atcttttgga cttgtgccag gtggcggagc tttggtccgc
     1021 cgggcggacg agggcgtccg cccctaggtc tgtcgcaccc ggttgacgat catcgcaatc
     1081 gtcctctgcg ccgcc
//
LOCUS       DASRPQ010000816         1065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_97345, whole genome shotgun sequence.
ACCESSION   DASRPQ010000816 DASRPQ010000000
VERSION     DASRPQ010000816.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97345"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..630)
                     /locus_tag="VFD73_09355"
     CDS             complement(<1..630)
                     /locus_tag="VFD73_09355"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HZI74213.1"
                     /translation="MLWAGTGVVWTVTGGVPRSMLLGNSAQAAEESGRELSFVQISDS
                     HIGFANAPNMDTPGTLREAIAEVNKLKGGARLLIHTGDVSHLSKDGQFDTAEQIIRGA
                     GLETHYVPGEHDVLVDDGKAFFERFTKGGPQGWYSFDQQGVHFVGLNNVQNLKAGGLG
                     NLGHEQLEWLEDDLRGRSASQPIVVFAHVPLWTVYPEWGWGTDDGAQALG"
BASE COUNT          168 a          362 c          311 g          224 t
ORIGIN      
        1 gccgagcgcc tgcgccccat catcggtgcc ccagccccat tcggggtaga ccgtccagag
       61 cgggacgtgg gcaaaaacca cgatcggctg actggcggac cggccacgga gatcatcttc
      121 cagccattcg agctgctcat gaccgagatt cccgaggccg cccgctttca ggttctgcac
      181 gttgtttagt ccgacgaagt gcacgccctg ctggtcgaag ctgtaccatc cctgcgggcc
      241 tcccttcgtg aagcgctcga agaacgcctt accgtcatcg acaagcacgt cgtgctcacc
      301 gggcacgtaa tgcgtctcga ggccggcccc gcgtataatc tgctccgccg tatcgaactg
      361 cccgtccttc gacaggtggc tgacatcgcc ggtgtggatc agcagccgcg cgccgccctt
      421 gagcttgttc acctcagcga tggcctcccg cagcgtgccg ggggtgtcca tgttcggcgc
      481 attggcgaag ccgatgtggc tgtcgctgat ctgcacgaag ctcagctcgc gcccggactc
      541 ttcagccgcc tgggcactgt ttcctagcag catagaccgc ggcacgccgc cggtgaccgt
      601 ccacaccaca ccggtgccgg cccagagcat gcattttagc acccctcgtc ggttctgccc
      661 gctagtttca ttgtgctggt ccacgtttgc gatctcctga tggtcggcat tgttgtgacc
      721 tgcacggtgt cggtttattc ccgggctggt cgccattttt taatgacgcg catgggcggt
      781 agccgccaca cggccgtgag gacggccgac tcggctttgc tcttcagctt aattatgacg
      841 gtgccgcgca gatcggcacg ccacagagca tcccccgtat catttccggc ctcgcgcccc
      901 tgagcgccga cgctatcctg agagagaagg ccaacatccg cgccctcaac accgctcgat
      961 gtttgtggcg cttcgcagcg ggtcgcgttc tcggatgcgg ttctctgtcg gcatatggga
     1021 gcgccccatc caggtctccc tcgatggaat gctgtccggt gcaat
//
LOCUS       DASRPQ010000817         1063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4169484, whole genome shotgun sequence.
ACCESSION   DASRPQ010000817 DASRPQ010000000
VERSION     DASRPQ010000817.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4169484"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(140..934)
                     /locus_tag="VFD73_09360"
     CDS             complement(140..934)
                     /locus_tag="VFD73_09360"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HZI74214.1"
                     /translation="MASGSTATRGSWRRGEGTPALISGPLGYPLEPGHEVASLYTAPE
                     DRRAALGNLRLVDCAPDASETDRLQEICHDLRQPVAGIMALAEAALSNAEITLGVRNR
                     LGQIRDQAEWLSELLRDLIEPPATGTAQGQSHDLVHLASEVVGMEMATYPGDLSLQWS
                     GGNMCVAGNGVELRRAIVNLLSNATRAAGPSGKVLVQLRRAADHVVLTVDDSGPGFGL
                     IHRGVGLGLLAVARGLKSYGGNLEYSRSQMGGVRAILALRASDAPA"
BASE COUNT          205 a          368 c          313 g          177 t
ORIGIN      
        1 tacggctacc ccaagtgccc tgttacggct acccaaacgg cgctaaagga aacgtaaacc
       61 gcccctgcct gccatcaggg tgccgaccct gcgaagtagg cgggctgctc gtcgcaggct
      121 acgagaccat catcgggcct cacgccggag catcggaggc ccgcagcgcg aggatcgccc
      181 tgactccccc catctggctc cggctgtact ccaagttccc tccgtaactc ttcaggccgc
      241 gcgccactgc cagcagtccc aggccgacgc cccggtggat cagcccgaac ccggggccgg
      301 agtcgtcgac ggtcagcacc acgtggtcgg cggcgcggcg caactggacg agcaccttcc
      361 cgctcgggcc agccgcgcgg gtcgcgttgc tcagcaggtt gacgattgcg cggcggagct
      421 cgaccccatt cccggccacg cacatattgc caccgctcca ctgcaaagag aggtcacccg
      481 ggtatgtagc catctccatc ccaaccactt cggaagcaag atggacgagg tcgtgagatt
      541 gaccttgtgc ggttccggtc gcaggcggct caatgaggtc acggagcaac tcgctgagcc
      601 actccgcctg atcccggatc tgccccagcc ggttccgaac acctagtgta atctcggcgt
      661 tactcagggc ggcctcggcg agagccatga tacctgccac cggctgccgc agatcatggc
      721 agatctcctg gagacggtca gtctccgagg catccggtgc gcaatctaca aggcgcaagt
      781 taccaagagc cgcgcgccta tcctctggcg ctgtgtacag cgatgctact tcgtggcccg
      841 gctcgagcgg gtaaccgagc gggccagata tcaatgctgg agtcccctct ccccgacgcc
      901 acgatcccct cgtagctgta ctccccgacg ccacggtccc ctcgtggcta tgcaaagacc
      961 atatcaggcg ccctgggcca agttaaagga ggggtgaacg aaacctttac aatgaatgac
     1021 tagacggtaa cggcgacgta acgccatgga gttggcccgg ctg
//
LOCUS       DASRPQ010000818         3509 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1036862, whole genome shotgun sequence.
ACCESSION   DASRPQ010000818 DASRPQ010000000
VERSION     DASRPQ010000818.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3509
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1036862"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2908
                     /locus_tag="VFD73_09365"
     CDS             <1..2908
                     /locus_tag="VFD73_09365"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HZI74215.1"
                     /translation="AMPLRTCGTSVLLTLLTAQLLAAQVRQISGRITNASTGEGLSEA
                     TVAVVGTSILAQTGNDGNYVLNAPEGDRTLMVRAIGYKRRQVEVPASQGTTDVALEPD
                     VFKLEEIVITGQSTGIERQNLPNAVATVDAADISRAPTPTLESALQGKIPGALIQANS
                     GAPGGGIQLNLRGVSTINASVDPLFVVDGIVISNAAIPNGANAVTAAQSGGNPRNQDN
                     PVNRLADINPEDIERVEVLKGGSAAAIYGSKATNGVVIITTKRGQVGKPQFNISQRFG
                     FFEAAHLLGQRQFPTLADALQFSRDTALVTSLYQQGRSFNFEDELYGRKPLSTETSAS
                     VSGGTEQTQYFLSGLVKNDGGIATNTGYKKQAVRANIDQDLGSGIKLEVNTNVIHSSS
                     DRGLSNNDNSGTSPYLVFPFTPSFLNLEPTNGVFPVNPFERSNPLQTFALLQNNEDVW
                     RVLGTVTAKWSVLRSARSNLQVITIGGADFFNQRNNFVSPPELQYEPNDGQPGTVVLT
                     KAQNRNLNLAVNATHTYTPASEGWQATTSAGVQYEDRELNATQVLGRTLLAGTSPDLA
                     ASVTPFQQIEPVRDLGIFGQEEVLLLDRKLLLTAGVRADRSSSNGNTGKYFLYPKAAA
                     SYRFVKPFGGIDELKLRGAYGQTGNRPVFGTKYVSDTTATIGGNFGSLVPVQAGDPNI
                     KPERQKEYETGVDATFGNGRADLSLTLYQRDISDLILVQTIAPSIGQQFRAFSSTSTL
                     RNRGVEAAVGIQPIRTRDASWLFRTTFSLNRSKITHLSVPTFQTGGFGTSLGTFQIEE
                     GKSATQIAGREGVVGDAYPDFQMSFTNDIEYHAFTLGFLFDWKHGGDIINLTEFLYDA
                     GQNSKDYVTAGAQRQVDFATKTGVYVQDGSYLKLREVNLGYTLPNRITSSLFGRNVRY
                     TRLTLSGRNLLRFTDYRGLDPEVSNFGNQAIVRNVDVAPFPPSRSFFLSVDLGF"
     gene            2911..>3509
                     /locus_tag="VFD73_09370"
     CDS             2911..>3509
                     /locus_tag="VFD73_09370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74216.1"
                     /translation="MTSILKPSGLLLLVGVLATEACNYDIANPNAPDPLGQNPTRSAV
                     AGAANGLLIGDRVDLADWVLDAAILGREGYRFDGSDPRFTGELLQGPLDAGGNAFGGD
                     HWNEPYANIRDAKSLLAVVGTSQALSAEEQSAVSGFARTIEALEFLNVVNGHTQDSIP
                     IDVVADVTGPPAPFRSHADAMAEIVSLLDQAQAELAAGGA"
BASE COUNT          723 a         1088 c         1075 g          623 t
ORIGIN      
        1 cgccatgcca ttgcgcacgt gcggcacgtc cgtcctgctc accttgctca ccgctcagct
       61 gctggctgct caggtgcgtc agatcagcgg tcggatcacc aatgcctcga cgggcgaggg
      121 tctctccgag gcaaccgtag cggttgtcgg caccagcatt ctggcccaga cgggaaacga
      181 cgggaattat gtcctcaacg ccccggaggg tgaccgcaca ttgatggtgc gggcaatcgg
      241 ctataagcgc aggcaggtcg aggttcccgc ctcgcaaggg accaccgacg tggccttgga
      301 gccggacgtg ttcaagctcg aggagatcgt gatcaccggc caatcgaccg gcatcgagcg
      361 gcaaaacctg ccgaacgcgg tcgccaccgt cgacgccgcg gatatcagcc gggcaccgac
      421 ccccacattg gagagcgcac tgcagggcaa gattccgggc gcactgattc aggccaactc
      481 tggggcccca ggcggtggta tacaactcaa cctgcggggg gtctcgacaa tcaatgcgag
      541 cgtggacccg ctcttcgtag tggacggtat cgtcatcagc aatgcggcga taccgaatgg
      601 ggcgaatgcc gtgacagccg cgcagtcggg gggcaacccg cgaaaccagg acaatccagt
      661 caatcgattg gctgacatca atcccgagga tatcgagcgg gtggaggtgt tgaagggcgg
      721 ctcggcggcg gcgatctacg gatcgaaggc caccaacggc gtggtgatca tcacgaccaa
      781 acggggccag gtcgggaagc cgcagttcaa catcagccaa cgcttcgggt tcttcgaagc
      841 cgcgcatctg ctcggtcagc ggcagtttcc cactctggcc gatgcgttgc agttctcgcg
      901 ggacacggca ctggtgactt cgctgtacca gcaaggccgg agcttcaact tcgaggatga
      961 gctctacggg cggaaaccgc tcagcactga gacttcggcc agcgtgagcg gcggcaccga
     1021 gcaaacgcaa tacttcctct ccggtttggt gaagaacgat ggcggcatcg cgacgaatac
     1081 cggatataag aagcaggcag ttcgggccaa catcgatcag gatctgggca gcgggatcaa
     1141 gttggaggtc aacaccaatg tgatccacag ttcctcggac cggggactct ccaacaacga
     1201 caactccggc accagcccgt acctcgtctt tccgttcacg ccgagcttcc tcaatttgga
     1261 gcccacgaac ggcgtgttcc cggtcaatcc cttcgagcgc agcaatccgc tgcaaacgtt
     1321 cgcgctgttg cagaacaacg aagatgtctg gcgggtgctg ggaacggtca cggccaagtg
     1381 gtcggtgctg cgctctgccc ggagcaacct gcaggtcatc accatcggcg gcgcggactt
     1441 cttcaatcag cgaaacaact tcgtctcccc gcctgagctt cagtatgagc ccaacgatgg
     1501 tcagcccggc accgtggtgc tgaccaaggc gcagaatcga aacctgaatc tggctgtgaa
     1561 tgcgactcat acctacacac ccgcgtcaga ggggtggcag gcgacgacgt ccgccggagt
     1621 gcagtacgag gatcgggagc tcaacgccac gcaggtgctg ggaagaacgc tgctcgccgg
     1681 caccagcccg gatctggcgg ccagcgtcac gcctttccag caaatcgaac cggtgcgcga
     1741 tctggggatt ttcgggcagg aggaagtgct gctgctcgac cggaaactgc tgctgacggc
     1801 tggagtacga gccgaccgaa gcagctccaa tggaaatacg ggcaaatatt tcttgtatcc
     1861 caaggctgcc gcatcgtacc gcttcgtcaa gccgttcggc ggcatcgacg agttgaagct
     1921 acgaggggcc tacggtcaaa ccggaaaccg gccggtgttc ggcaccaagt atgtctcgga
     1981 taccacggca accattgggg ggaatttcgg gagtctggtg ccggtgcagg ccggcgaccc
     2041 gaacatcaag cccgagcggc agaaggagta cgagaccggg gttgatgcaa cgtttgggaa
     2101 cggtcgggcc gatctgagcc tcacgctgta ccagcgcgac atcagcgatc tcattctggt
     2161 tcagaccatc gcgccgtcta ttgggcagca gttccgcgcc ttcagctcca ccagcacgct
     2221 caggaatcgt ggggtcgaag cagccgtcgg catccagccg atccgaaccc gcgatgccag
     2281 ctggctcttc cggacgacct tttccctgaa ccgaagcaaa atcacccacc tgtcggtgcc
     2341 gaccttccag accggcgggt ttggaacctc gctgggcacc ttccagatcg aggaaggcaa
     2401 gtcggccacc cagattgcag ggcgggaggg agtcgtgggc gatgcttatc ccgacttcca
     2461 gatgtcgttc accaacgata tcgagtatca cgcgttcacc ctcggcttcc tgttcgactg
     2521 gaagcacgga ggagacatca tcaacctcac agagtttttg tacgatgccg ggcagaacag
     2581 caaggactac gtcacggcgg gggcacagcg acaagtcgac ttcgccacga agaccggcgt
     2641 ctatgtccag gatggctcgt acctcaagct tcgtgaggtc aacctgggct ataccctgcc
     2701 gaaccggatc acgtcatctc tcttcggaag gaatgtacgg tatacccgcc tcacgctcag
     2761 tggccgcaac ctcctccggt ttacggatta tcgagggctc gaccccgaag tcagcaactt
     2821 cggcaaccag gcgattgtgc ggaacgtgga tgtggctccc ttcccgccga gtcgcagctt
     2881 tttcctctca gtcgacctgg ggttctgacc atgacatcca tactgaagcc atctgggttg
     2941 ctgctcctgg tgggtgtgct tgcaaccgaa gcctgcaatt acgacatcgc gaaccccaac
     3001 gcgcctgacc cgctgggcca aaaccccacc cggtcagcgg tggccggtgc cgccaacggt
     3061 ctcctgatcg gtgatcgagt cgacctggcg gactgggtcc tcgacgccgc gatacttggc
     3121 cgggagggat atcgattcga cggctccgat ccgcggttta ccggcgagct gctgcagggc
     3181 ccgctcgatg ccggcggaaa cgcgttcgga ggcgatcact ggaacgagcc gtacgccaac
     3241 attcgcgatg caaaatcgct tctcgcagtc gtgggaacgt cccaggcact cagcgcggag
     3301 gaacagagcg cagtcagcgg ctttgcccga actatcgaag cgctggagtt cctgaacgtc
     3361 gtgaatggac acacccagga ctccattccg atcgatgtcg tcgcagacgt caccggccca
     3421 ccggctccgt tcaggagcca tgccgatgcg atggcggaga tcgtctccct gctcgaccag
     3481 gcgcaggctg aacttgcggc cggcggtgc
//
LOCUS       DASRPQ010000819         1709 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1663870, whole genome shotgun sequence.
ACCESSION   DASRPQ010000819 DASRPQ010000000
VERSION     DASRPQ010000819.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1709
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1663870"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            79..1236
                     /locus_tag="VFD73_09375"
     CDS             79..1236
                     /locus_tag="VFD73_09375"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HZI74217.1"
                     /translation="MSLVISAVLALTLAAPHALPPQTENSEPDTTIDAATRGRVIQGV
                     LRRLEEGYVFPKTAHAMAQSIEGRARRGEYDSIVSAQAFAHRLTQDLRSVSHDLHLHV
                     AYSKAGVQDEGPGGEPSPADQTAHQIYGRRINWGLERAERLNGNVGYLRIQSFDFDGK
                     LADSALAAAMNFLANTDALILDVRNNGGGDPTYVAAVCSYVMPANTLINKFYWRPQNR
                     WDEFRTSKVTGHYYGTQKPIYVLTSDGTFSGAEEFAYDVQTQRRGEIVGDTTGGGAHP
                     GGMREVSDGFGVWVPAGRAVNPVTGKDWEGTGVIPDVPVSAEAALRTAHVRALRKILA
                     SERDPKRQETLRQVIEEVSRGSSAGCRYSSSARPNIRWISPRSSACAIKYT"
     gene            complement(1161..>1709)
                     /locus_tag="VFD73_09380"
     CDS             complement(1161..>1709)
                     /locus_tag="VFD73_09380"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA C-terminal domain-containing protein"
                     /protein_id="HZI74218.1"
                     /translation="ALLVFLVRPLVVALCLAPFRYPPREVLYIGWVGLRGAVPIVLAT
                     FPVLAGAPGAERLFDLVFFIVVATALVPGATVAWVTRRLGLQSREPPAPQAVLAIESR
                     QPLQGDLLSFYIDEALVVAGMPVQELPLPEGSAVTLIVRDNRLLPPTQDTTLQPGDHV
                     YLIAQAEDRGLIHLMFGRAEEE"
BASE COUNT          340 a          551 c          548 g          270 t
ORIGIN      
        1 tttatcgcct ctcccagcgt agtgattcca tagttgtcct ggatccaaca gaaccgaggt
       61 atgtcaccgg gaggtcccat gtccctggtc atttcagccg ttctcgctct taccctggcg
      121 gcgccacacg ccttaccacc gcagacggag aactccgagc cggacactac aatagatgca
      181 gccaccagag gccgggtgat tcagggcgtt ctccggcgcc tggaggaggg atacgtcttt
      241 cccaagacag cccacgcaat ggcgcagtcg atcgagggtc gagcccgacg aggcgagtac
      301 gacagcatcg tgagcgccca ggcctttgcc caccggctta cccaggatct ccgctccgtc
      361 agccacgacc tgcacctgca cgtcgcctac agtaaagccg gagtccagga cgagggtccc
      421 gggggcgagc cctcgccggc cgatcagact gcgcaccaga tctacggacg aagaatcaat
      481 tggggactgg agcgtgccga gaggctcaac ggcaacgtgg gatacctccg gatccagagc
      541 ttcgacttcg acggcaaact ggccgactca gcgctggctg cagcgatgaa ctttttggcc
      601 aacaccgatg ctctcatcct ggatgtgcgc aacaacggcg gcggtgaccc tacctacgtc
      661 gcagcggtct gcagttacgt catgccggcc aacaccctga tcaacaagtt ttactggcgg
      721 ccgcagaacc gatgggacga gttccgcacc agcaaggtga cgggccacta ctacggcacg
      781 cagaagccga tctacgtgct caccagcgac ggcacctttt ccggtgccga agagttcgcg
      841 tatgacgtgc agacccagcg gcgcggcgag atcgtgggtg acacgaccgg cggaggcgct
      901 catccggggg gcatgcggga ggtatccgat ggattcggcg tctgggtgcc ggctggacgg
      961 gcggtgaatc cagtgaccgg caaggactgg gaaggcaccg gagtgatccc cgacgttccg
     1021 gtctcggccg aggccgcgct ccggacggcg catgttcgag cgctccgaaa gatcctcgcg
     1081 tccgagcggg atccgaagcg gcaggagacg ttgcgccagg taatcgagga ggtttcgcga
     1141 ggctcatcgg cgggctgccg ttattcttcc tcggcccgtc caaacatcag atggatcagt
     1201 ccccggtcct cggcctgcgc gatcaagtac acgtgatcgc ccggctgaag cgtcgtgtcc
     1261 tgtgtgggtg gcagcaaccg gttgtcgcga acgatcaggg tgacggcgga tccctctgga
     1321 agcggcagtt cttgcaccgg catgccggcc accaccagcg cttcatctat atagaaggag
     1381 aggaggtccc cctggagcgg ctggcgcgac tcgatggcca gcacggcctg gggcgccggg
     1441 ggctccctgc tctgcagccc gagccttctg gtgacccagg cgacagttgc cccaggtacg
     1501 agcgcagttg cgaccacgat gaagaagacc aggtcgaaga gccgctccgc gccaggagcg
     1561 ccggccagca cgggaaaggt cgccagcacg atcggcaccg cgccacggag tccgacccac
     1621 ccgatgtaga gcacctctct cggtggatag cgaaacggcg ccagacagag cgccaccacc
     1681 aacggccgca ccaggaagac gagcaacgc
//
LOCUS       DASRPQ010000820         1042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1664248, whole genome shotgun sequence.
ACCESSION   DASRPQ010000820 DASRPQ010000000
VERSION     DASRPQ010000820.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1042
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1664248"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(168..716)
                     /locus_tag="VFD73_09385"
     CDS             complement(168..716)
                     /locus_tag="VFD73_09385"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HZI74219.1"
                     /translation="MDGQVNLRPVMEDDLSWLASLTRGPAATGPYEWHGWSDSQGLRR
                     SWAESGLLGDDGGVLIVLHGTDRVGVVDWRKVQTGRAAFSWDIGIGLAPEFRGRGYGS
                     EAQQLLVRYLFAHTAANRVEAITEIGNVAEQRALEKAGFTREGVLRGRSFRQGCYRDN
                     VIYSVLRDEVKLEDSASEDGMV"
     gene            845..>1042
                     /locus_tag="VFD73_09390"
     CDS             845..>1042
                     /locus_tag="VFD73_09390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74220.1"
                     /translation="MTRDWPVLVADSPRPFPGDIVRSDAIALVDRPLNRRCVVALSDQ
                     ERIEAQRETVRQHIAGENDHDW"
BASE COUNT          207 a          370 c          298 g          167 t
ORIGIN      
        1 cagctagtcc agtgaacgcg acctgccaag atcaccgtgt ccgttgcgtg cccgacgagg
       61 cagacagcca agggtaatgg cagtcactcg cggatagctc cccatgcccg ctgacctgcg
      121 tatggacagg tccgggcacg accgcctacg tcctcctaag cagtagctca gaccatgcca
      181 tcttctgatg cggaatcctc tagcttgacc tcatcacgaa gcacgctgta aatcacattg
      241 tcgcggtagc acccttggcg gaacgaacgc ccgcgcagta cgccctcccg agtgaaccca
      301 gccttctcaa gtgctcgctg ctcagcgaca ttgccgatct ccgtgatggc ctctacgcgg
      361 ttggccgcgg tgtgggcgaa caaatagcgc accagcagct gctgcgcctc cgaaccgtag
      421 ccgcggcccc ggaactccgg cgccagcccg ataccgatgt cccaactgaa ggcagcccgc
      481 ccggtctgaa ccttgcgcca gtccacgacg ccgacgcgat cggtgccgtg tagcacgatc
      541 aggaccccac cgtcgtcgcc gagcagcccc gactcagccc aggacctccg cagcccttga
      601 gaatcgctcc agccatgcca ctcatacggg cctgtggcgg ccgggccacg tgtcaggctc
      661 gcgagccagg acagatcgtc ctccatcacc ggccggaggt tcacctggcc atccatggag
      721 gcgagcctac agctgacagc aacggccaac agctaacggc cgcgatcggc gactgccctg
      781 cctgcaagcc cctggaccag aaagcagtaa atctccacgc catctccacc agctttgcat
      841 ccgtatgaca cgggactggc ctgttctggt ggctgattcg cccaggccat tcccgggcga
      901 catagtgcgg tcggacgcga tcgccctcgt ggaccgccca ctcaacagga ggtgcgtcgt
      961 ggcattgtcg gatcaggaac gcatcgaggc tcagcgggag acagtccgcc agcacatcgc
     1021 cggggagaac gaccacgatt gg
//
LOCUS       DASRPQ010000821         1189 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3238234, whole genome shotgun sequence.
ACCESSION   DASRPQ010000821 DASRPQ010000000
VERSION     DASRPQ010000821.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3238234"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..758)
                     /locus_tag="VFD73_09395"
     CDS             complement(<1..758)
                     /locus_tag="VFD73_09395"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003953 - NAD+ nucleosidase activity
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HZI74221.1"
                     /translation="MGGRSVFISYRRQLSWQLAELVRDNLVEHDFDTFVDIKNLDSGE
                     FDRKILGQIETREHFIVLLQPGSLDRIGEKGDWLRREIAHALRRGRNVVPVTADGFKF
                     PRDLALPPDVERLPSFQAVTVERPEYFNAAMKLLRKRFLKMPSRPAASSVPETRSVVE
                     PGRHPLASPEALWNAKFSVPVLPAPVLTSSDPVTLIVTALAAGAATGMTESAASAVKD
                     AYTSLRALVRKRLAGQPDAELVLTRHETAPDTWQA"
BASE COUNT          213 a          391 c          363 g          222 t
ORIGIN      
        1 gcctgccatg tatccggagc ggtctcatgc ctggtgagca ccagctcagc atcgggctgg
       61 ccagccagcc gcttcctcac caaagcccgc aagctcgtat aggcatcctt caccgccgac
      121 gctgccgact ccgtcatccc cgtcgccgct cccgctgcaa gcgccgtcac aataagcgtt
      181 accggatcgc tactggtcag cacgggtgcg ggcaggaccg gaaccgagaa tttggcgttc
      241 cagagcgcct ctggactagc cagcgggtgg cggcccggct cgacgacgct gcgggtctcg
      301 ggtacggacg aggcggcggg cctcgacggc atcttcagga accgtttgcg cagcagcttc
      361 atcgccgcgt tgaagtattc cggccgttca acggttaccg cttggaacga cggtagcctc
      421 tccacgtcgg gcggcagcgc caggtcgcgg gggaatttga acccgtcggc ggtgactgga
      481 acgacgttcc ggccgcggcg cagcgcatgg gcgatctcgc ggcgcagcca atcgcctttc
      541 tcgccgatcc ggtcaaggga accaggctgc agcagcacga tgaagtgctc acgcgtctcg
      601 atctggccta ggatctttcg atcgaactca ccactgtcaa gattcttgat gtccacgaat
      661 gtgtcgaagt catgttcgac gaggttgtcg cggaccagct ccgccagctg ccaggagagc
      721 tggcgccggt aggagataaa gaccgaacga ccccccacaa cgatctatca tagccgggcg
      781 ccaacgcagt gccgagtgcc ttgttctggg ctgtgcagct ggggagcgcg gaacgacccg
      841 ccgcagacaa gggagttgca cgtcggggca tgtttctggg ccggtcgtga ctgcccccgg
      901 gcgccgttct tgaccccatc aacctggcac gcaacgggca cgacgagttg caggctatct
      961 ttcccccagc gctctgcctc tcggcataat tgtgttccct tggcaggtaa tacaatgcgg
     1021 tctcggactt tcggcagata cgttcttcat gccgccggac aaggcggctc gcttccgatg
     1081 catttgccag ttgaatcaac catatcgcgg aaggcctcct cccacgaccg tcgcccattc
     1141 tgtcagggcg ccatcgggcg ccacgctgcc gcatagaagt gcgctctca
//
LOCUS       DASRPQ010000822         1890 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1037632, whole genome shotgun sequence.
ACCESSION   DASRPQ010000822 DASRPQ010000000
VERSION     DASRPQ010000822.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1037632"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..352)
                     /locus_tag="VFD73_09400"
     CDS             complement(<1..352)
                     /locus_tag="VFD73_09400"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HZI74222.1"
                     /translation="MPREITHTRRLVDVAAPLECFLTAVQSLGAQLGPLLLQLPPSFR
                     FTEPLVQTFLTALRTRFHGAVVCEPRHQSWFSPAAAQLLDAFQVARVAADPARVPAAA
                     IPGGWPGLVYYRWHG"
     gene            complement(398..1702)
                     /locus_tag="VFD73_09405"
     CDS             complement(398..1702)
                     /locus_tag="VFD73_09405"
                     /inference="COORDINATES: protein motif:HMM:NF025080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI74223.1"
                     /translation="MAKDSMMTTSRASLCALGEYLRRQCFFAPLQEQVQIPQKTVWHR
                     PIDKVLDGLLGILCGAKTIAQSNITIRVDPAVQRAFGRTGCAEQSTIARTLQACMPAQ
                     VTQLERVSWYYLKRYGATPHHRFHERRLWVDVDLTPMPIGAKAEGSERTWMGRNRSKT
                     GRKVLRWTASDYREILHETLLRGKASAVPALKTALGELETRLGWTRERRQRIVLRLDG
                     GFGTAEALNWLLSRGYQVVAKISHSGRVRKWRQAIGPWQPTSSPGREIAAVLHPHRFC
                     RTTRQWVIRTPKDKGGYHYAVLVTTLSDYEPVALADAYDGRAMIEATFCQDKQALGLV
                     TRRQRRWEAQQMVLLLARLAHHLLLWGKQWLSRVPATRRRLQGYGLMRLLRDVWAVPG
                     VIRWRRGWMVSVRFSPLHPLATPLQESFSALFGGRVRVGYLR"
BASE COUNT          352 a          649 c          569 g          320 t
ORIGIN      
        1 tgccatgcca ccgataatac accagccccg gccacccacc cgggatcgcc gccgccggga
       61 cccgcgccgg atcggccgcc acccgtgcca cttggaatgc gtccaggagc tgcgccgcgg
      121 ccggactgaa ccagctctga tgccgcggct cacagaccac agcgccgtga aagcgcgtgc
      181 ggagtgcggt caagaacgtc tgcaccagcg gctcggtaaa gcggaaactc gggggcagct
      241 ggagcaggag cggccccagt tgcgcgccca gactctgcac cgccgtcagg aagcactcga
      301 gcggggcggc cacgtcgacc aggcgccgcg tgtgggtgat ctcccggggc attttgacgg
      361 cgaattggaa cgggtcgggg acggcagctg ccagctttta gcgcaaataa cccacccgca
      421 cacgcccgcc aaacagggcg gaaaagcttt cctggagcgg ggttgcgagc ggatgcaggg
      481 gggagaaacg gacactgacc atccagcccc gccgccaccg gataaccccg ggcaccgccc
      541 acacatcccg cagtaagcgc atcaacccgt agccctgcaa ccgccggcga gtcgctggca
      601 cccggctgag ccactgcttg ccccacagga ggagatgatg cgccaggcgc gccaacagca
      661 gcaccatctg ttgggcctcc caccggcgct gccggcgggt caccagcccc aaggcctgct
      721 tgtcctgaca gaaggtcgct tcaatcatgg cccggccgtc gtaggcatcg gcgagggcca
      781 ctggctcgta gtcgctcaag gtcgtcacca acacggcata gtgatacccg cccttgtcct
      841 taggggtgcg aataacccac tgccgggtcg tgcgacagaa gcgatgcggg tggagcacgg
      901 ccgcaatctc gcgtccgggg ctcgaggtgg gctgccaggg cccgatggcc tggcgccatt
      961 tccgtacccg cccgctgtgg ctgatcttcg ccaccacctg atacccccga ctgagcagcc
     1021 aattgagtgc ctcggcggtg ccaaaaccgc catccagacg gagcacgatc cgctgccgcc
     1081 gctcccgggt ccagcccagg cgagtttcca gttctcccag cgcggtcttg agggcaggca
     1141 cggccgacgc cttcccccgc agcagggtct catggagaat ttcgcggtag tcactcgccg
     1201 tccaccgcag gactttccgc ccggttttac tacgattccg tcccatccag gtccgctcac
     1261 tgccctccgc cttggcgccg atcggcatgg gcgtgagatc aacatccacc cacagccggc
     1321 gctcgtggaa ccgatgatgg ggtgtggccc cataccgttt gagataatac caggacaccc
     1381 gttcaagctg ggtcacctgt gcgggcatac aggcctgtag ggtccgggca atcgtcgact
     1441 gctcggcaca ccccgttcgc ccaaaggccc gttgcactgc cgggtcaacg cgaatggtga
     1501 tgttgctctg ggcaatggtc ttggcgccac agaggatccc caacaggcca tcgagcactt
     1561 tgtcgatcgg acgatgccac accgtttttt ggggaatctg cacctgttcc tgcagcgggg
     1621 caaagaagca ctgccgccgc agatactcgc ccaaggcaca caggctggca cggctggtcg
     1681 tcatcatgct atctttcgcc atggcgaact ccttcctcgc aagggggata gattcattgt
     1741 tgaccttaca atggagtata tccccttgta ggagttcgct ttccaggtat tttagccccg
     1801 atgatcaccc cgcttcttgg cgcgaaaagc tggcagctgc gtctgtcatc gcgccatccg
     1861 ggcgctacga tcctcccaac agtcattaat
//
LOCUS       DASRPQ010000823         3214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_412802, whole genome shotgun sequence.
ACCESSION   DASRPQ010000823 DASRPQ010000000
VERSION     DASRPQ010000823.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3214
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412802"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..592
                     /locus_tag="VFD73_09410"
     CDS             <1..592
                     /locus_tag="VFD73_09410"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003905 - alkylbase DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HZI74224.1"
                     /translation="LPVAFFRRPAEVVAADLLGAVITSSVDGIVTSGKIVETEAYLGY
                     DDPASHGYLHRRNARNQALFGPPGLWYVYLSYGMHWCANLVCQEAGLASAVLLRALEP
                     LAGLDAMRERRGGVSDRDLCSGPGKLCQALGITRQLDGQLMSKSRVVVERGTRHRRDR
                     IVSTPRIGITKAADWPLRFHLAGSPWASRKEKSGRS"
     gene            complement(628..1359)
                     /locus_tag="VFD73_09415"
     CDS             complement(628..1359)
                     /locus_tag="VFD73_09415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74225.1"
                     /translation="MRTLYGGSLMRMFTRIIPLAALVLGLPGEHLLAQQPGNGGGFQW
                     YIGGQGGIMNFESPVEGRKTQPMGGAHLLITARRTGLLLSVDQNFGPTVQSGYSVQVF
                     DSLGNFVDQQEIPVSFKYIRRYSAMLLAFPIKGPVTPFFGIGVGIQHTGGHTPDDGFA
                     RDLGSSGFGSLVGGLNFRVSRFSAFGQYQVTTGPSQQSSSVSFKDGSSMVAFGNLFTG
                     PIHTLSAGLRFGLGNARERPQGGGY"
     gene            complement(1583..2782)
                     /locus_tag="VFD73_09420"
     CDS             complement(1583..2782)
                     /locus_tag="VFD73_09420"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008890 - glycine C-acetyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HZI74226.1"
                     /translation="MTNSLDQRIEPELEQFIRDGTYKRLNFLDSPQAARVRMEGRGEV
                     IILSSNNYLGLSNEPAVVAAGKNALDRFGAGTASVRFICGTFTIHRVLEAACARLVGT
                     AASLSFVSAWNANEAVPATLLTEDDLVISDQLNHASIIDAIRLAKAITKCQSAVYKHG
                     DLSDLDAKLSAARDRRVKMVITDGVFSMEGAIAKLPDLIELCRKHGAVLVVDDSHGTG
                     VLGKEGRGTAEHLGVLGEVDMITSTLGKALGGAAGGFVAASAAVCDYLTQRARPQLFS
                     NALPPTVAGSALASIEYLEQHPERVAALRENARYFREQLLALGFHPLAGETPIIPVIL
                     GETAAAIRMSDMLLNAGVFVTGFGYPVVPQGQARVRCQISAVHTRQDLDQALAAFRKV
                     GQQLRLI"
     gene            complement(2779..>3214)
                     /locus_tag="VFD73_09425"
     CDS             complement(2779..>3214)
                     /locus_tag="VFD73_09425"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HZI74227.1"
                     /translation="LDLARRMGAHVTLNPGSDDVPARIRQLTAGDGVDLVCEMSGHPS
                     GHAQAFSSARLGGRVNLLGTPSRTTEVDFARDVIFKGLTVYGVTGRKMYQTWHQMQRF
                     LRAGQLDPRPVITHRFPLERIADAIQVIKDGQAGKVILEVNG"
BASE COUNT          619 a         1005 c          984 g          606 t
ORIGIN      
        1 gctgcccgtt gcttttttca ggaggccggc tgaagtcgtg gctgccgatc tgctcggggc
       61 tgtcatcacc tcgtcggtcg atgggatagt gaccagcgga aagatcgtag aaaccgaggc
      121 gtacctgggc tacgacgacc cggcctcaca cggatacctg caccgccgaa acgcccgcaa
      181 tcaggcgctg ttcggccccc cggggctgtg gtacgtgtat ctcagctatg gcatgcactg
      241 gtgtgcgaac ctggtgtgcc aggaagcagg actggcgagc gcggtactcc tgcgcgcttt
      301 ggagccactc gcagggctcg acgccatgcg cgaacgccgc ggaggcgtgt ccgaccggga
      361 tctctgttcg ggtccaggaa agctgtgtca ggcgctgggc atcacccgtc agctggatgg
      421 gcagctgatg tcgaagagtc gagttgtcgt cgagcgcggc actcgccacc ggagagatcg
      481 gattgtctcg accccccgta tcggcattac caaggccgcc gattggccgc tccgttttca
      541 cctggccggc tcgccctggg cctcccggaa agaaaaaagc gggagatcat aacgatctcc
      601 cgctcagctg ctgagagctg tgggcgccta gtatccgccg ccttgaggcc gctctcgcgc
      661 attgcccagt ccgaagcgga gtccagccga aagcgtgtga atgggaccgg tgaacagatt
      721 cccgaacgca accatgctgc tcccatcttt gaacgagacg ctcgaggact gttggctggg
      781 tcctgtcgtc acctgatact gtccgaaggc gctgaaccga ctcacgcgga agttcaggcc
      841 gccaaccagc gagccgaatc cagagctgcc gagatcccgg gcgaacccat catcgggcgt
      901 gtggccgccg gtatgctgga tgccaacgcc aatgccgaag aagggagtga ctgggccctt
      961 gatcggaaac gccaggagca ttgcggaata tcttcggatg tacttgaagg agaccggaat
     1021 ttcctgctgg tcgacgaaat tgcctaggct gtcgaacacc tgcacgctgt agccgctttg
     1081 cactgtcggt ccaaagttct ggtcgaccga taagagcagg cccgtgcgac gcgcggtgat
     1141 cagaagatga gcgccaccca tgggctgggt cttccgacct tcaactggcg actcgaagtt
     1201 catgatgcct ccctgcccgc cgatgtacca ctggaaaccg ccgccgtttc cgggctgttg
     1261 ggctagaagg tgctctccgg gcaatcccaa gacgagtgcc gcaagcggga tgatacgggt
     1321 gaacatgcgc atcagactgc ctccgtagag tgtccgcacc aggaccctcc tggcgcttac
     1381 cggcactatt tcacgcggtc cgtcaaaatg cgggaactca tgctgggaga gcgcggacgg
     1441 ggcaggaaac cgacccgagt gttcctgggt caatctgata atcgacaaca acttaccggc
     1501 ttctcgtcga ttcgccttcg gccgcctcgc gcggcggagg tgcaaagacc gggcctgcta
     1561 tacggagtgg gaggtcgtgc ccttaaatca gtcttagctg ctggcccact ttgcggaacg
     1621 ccgccagagc ctggtccaaa tcctggcggg tatgcactgc ggaaatttgg caacgcaccc
     1681 gggcctgacc ttgaggaacg acagggtagc cgaacccggt gacgaagacc cctgcgttca
     1741 gaagcatatc gctcatccgg atcgcggccg ccgtctcgcc caggatcacc ggaatgatcg
     1801 gtgtctcacc ggcaagtgga tgaaagccga gtgccagcag ctgctcccga aaataccggg
     1861 cattctctcg tagagcggca acccgctcgg gatgctgttc caggtattcg atactggcca
     1921 gagcgctgcc ggccacggtg ggagggagtg cgttagagaa gagctggggc cgggcccgtt
     1981 gcgtcaggta atcacagacg gccgctgacg cagcgacaaa gccaccagca gccccgccga
     2041 gcgcctttcc cagcgtggac gtaatcatgt cgacttcgcc gagcacgccg agatgctccg
     2101 ccgttccgcg gccttccttg cccagcaccc cggtcccgtg ggaatcatca accaccaaca
     2161 cggcgccatg tttgcggcag agctcgatca gatcgggcag cttggcaatg gccccttcca
     2221 tcgaaaacac accatcggtg atgaccatct tgactcgccg gtcgcgggcg gcgctcagct
     2281 tggcgtcgag gtcgctcaga tcgccgtgct tatacaccgc gctctgacat ttcgtgatcg
     2341 ccttggccaa ccggatcgca tcgatgatcg aggcatgatt cagctgatcg ctgatgacca
     2401 gatcgtcttc ggtgagtagg gtcgcgggca ctgcctcgtt tgcgttccat gcgctcacga
     2461 agctgagtga tgccgcggtg ccgacgaggc gggcgcaggc tgcctcgagc acacggtgga
     2521 tcgtgaaggt cccgcagatg aaacggactg acgctgttcc cgccccgaac cggtccagtg
     2581 cattcttccc cgctgccacg accgcgggct cattcgagag gcctagataa ttgttcgacg
     2641 acagaatgat gacctcacct cggccttcca tccgcacccg agccgcctgc ggactgtcga
     2701 ggaaattgag ccgtttatac gtcccatctc gaatgaactg ctccagctcg ggctcgattc
     2761 gctgatccag cgaattggtc atccgttcac ctccaaaatc actttgccgg cctgtccgtc
     2821 cttgatcacc tgaattgcgt cggcgattcg ctccagagga aatcgatgag taatgaccgg
     2881 ccgtggatcg agctggccgg cgcgaaggaa tcgctgcatc tggtgccagg tctgatacat
     2941 cttccgtccc gtcacgccgt agacggtgag ccccttgaag atgacatcgc gcgcaaaatc
     3001 gacttctgtc gtccggctcg gtgtcccgag caggttgact cggccaccga gtcgcgcgct
     3061 ggaaaacgcc tgagcgtgcc cgctgggatg tccgctcatc tcgcacacca gatcgacacc
     3121 atctccagcg gtgagctggc gaatgcgggc cgggacgtcg tcgctcccag ggttcagagt
     3181 aacgtgagcg cccatccgcc gcgccagatc gagc
//
LOCUS       DASRPQ010000824         1126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2918051, whole genome shotgun sequence.
ACCESSION   DASRPQ010000824 DASRPQ010000000
VERSION     DASRPQ010000824.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2918051"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            57..>1126
                     /locus_tag="VFD73_09430"
     CDS             57..>1126
                     /locus_tag="VFD73_09430"
                     /inference="COORDINATES: protein motif:HMM:TIGR01733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HZI74228.1"
                     /translation="MVQHRNVVRLFAATDAWFHFDAHDVWSLFHSCAFDFSVWEIWGA
                     LLYGGRLIVVAQDTARSPEEFYRLVCRKKVTVLNQTPSAFRQFIAAQAGSREEHHLRY
                     VIFGGEALEVATLKSWYERHEESQPRLINMYGITETTVHGTYRALSEEDTRRPGGSPI
                     GRRIPDLRIYILDAYGEPVPVGVTGELYIGGSGVARGYLDRPQLTMEKFLADPFSTEP
                     GARMYRTGDLGRWLPEGTIEFLGRNDFQVKIRGFRIELGEIEARLSQCAGVREAVVVA
                     REDVPGDKRLVAYLVGEEGMVPDAAELRAELLPQLPEYMVPSAFVVLQALPLSSNGKL
                     DRKALPAPETTALIAREYEAPQG"
BASE COUNT          201 a          305 c          392 g          228 t
ORIGIN      
        1 accatctcgc ctacgttatc tatacctccg gatccaccgg agatcctaaa ggtgtcatgg
       61 tccagcaccg gaatgttgtc cggctgtttg ctgccacgga tgcctggttt cattttgatg
      121 cccatgatgt gtggtcgctc tttcactcct gtgccttcga tttctcggtc tgggagatct
      181 ggggagcgtt gctttacgga gggcgcctga ttgttgttgc gcaggacacg gcgcgctcac
      241 ctgaggagtt ttatcggctg gtgtgccgga aaaaggtgac cgttctcaac cagacaccga
      301 gtgctttccg gcagtttatc gcggcccagg caggaagccg tgaagagcat catctgcgat
      361 acgtgatctt cggaggggaa gctttggaag tggcgaccct caagtcctgg tatgaaagac
      421 atgaggagag ccagccacgg ctcatcaaca tgtatggaat taccgaaacc acggtgcatg
      481 gaacgtatcg tgcattgtcg gaggaagata cccgcaggcc cggggggagc ccgatcggga
      541 ggcggatacc tgatttgagg atctatatcc tggatgcgta tggcgagccg gtgcctgtgg
      601 gtgtgaccgg ggagttgtac attggcggct ctggggtagc gcgcggatat ctggatcgtc
      661 cgcagttgac gatggagaag tttctggcgg atccgttcag cacggagccg ggagcgcgga
      721 tgtaccggac gggggacctg ggtcggtggc tgccggaggg caccatcgag tttctgggcc
      781 gcaacgactt ccaggtgaag atccgcggct tccgcatcga gctgggcgag atcgaagcgc
      841 gactctcgca gtgcgccgga gtgcgcgagg cggtggtcgt cgctcgcgaa gacgtcccgg
      901 gcgacaagcg cctggtggcg tacctcgtcg gcgaagaggg catggtgccg gacgcggcgg
      961 agctgcgtgc ggagctgctc ccgcaactgc cggagtacat ggtgccctcg gcgttcgtgg
     1021 tgctccaggc gctgccgctc tcgtcgaacg gcaagctgga tcgcaaggcc ctgccggcgc
     1081 ccgagaccac ggcgctgatc gcgcgcgagt acgaagcccc acaggg
//
LOCUS       DASRPQ010000825         1705 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2918278, whole genome shotgun sequence.
ACCESSION   DASRPQ010000825 DASRPQ010000000
VERSION     DASRPQ010000825.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1705
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2918278"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..423)
                     /locus_tag="VFD73_09435"
     CDS             complement(<1..423)
                     /locus_tag="VFD73_09435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74229.1"
                     /translation="MPPQFSIVVFSHLRWNFVYQRPQHLLSRLAATRPVFFIEEPEFD
                     ADGPVRWERTSPHANVTVLRPRTPIEAPGFTSEQLSLLAPLMQELASELESARIVAWL
                     YTPLALPLLRALRPEVVVYDCMDELSLFLGAPPELLTRE"
     gene            689..1582
                     /locus_tag="VFD73_09440"
     CDS             689..1582
                     /locus_tag="VFD73_09440"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HZI74230.1"
                     /translation="MASTRSFFSGVTVGAGLVYFLDPERGRMRREQFRRRISPMLDEA
                     RQAFGLTTDVSVTPGALRYGSRVGDIQGLGAATLSSATGGDIDPAASVWRVAGTLIAV
                     YGLIRRGAVGGLLRTLGTGMLVGSTRETMTGLGGRSHDRRRAVDIQKTLFIDAPIEQV
                     YGFWTNYENFPLFMSHVREVEDRGNGHSHWRVSGPGGVPIEWNAVLTQQTPNEVIAWR
                     SEAGSMLENAGIIRFTSVGGGTRVDLRFCYHPPAGGAGQAVVELLGSDPRAKLNEDLG
                     RMKSLLEATTRSESHGKESQP"
BASE COUNT          348 a          489 c          566 g          302 t
ORIGIN      
        1 ttctcgagtc aacagctccg gaggtgctcc cagaaacagc gaaagctcgt ccatgcagtc
       61 atagaccacg acctcgggcc tgagcgcccg gagcagcggc aaggccagcg gcgtgtagag
      121 ccaggcaaca atccgggcac tctctaattc actcgcgagt tcctgcatca gtggggcgag
      181 cagagacagc tgctcggaag taaacccagg tgcctcgatc ggggttcgcg gacgcagaac
      241 agtgacgttg gcatgagggc tcgttcgttc ccagcgtact gggccatcgg catcgaactc
      301 tggctcttca atgaaaaaaa ccggccgggt tgcggccagg cgggacagca ggtgctgggg
      361 gcgctgataa acgaagttcc agcggaggtg cgaaaaaacg acgatcgaaa actgaggcgg
      421 catgaagcgc tcgtggttga aagaacttcg ggatcgttgg tctagagatg tgctatggac
      481 aaaccttcct ctcccggagc agccctactg ctccagcaag ctcgagtgat tctcgatagc
      541 tttcaggaat tgcgggcgct ttatcttgcg cggccaattt gcttcgtcgc acctcggcgt
      601 gccgggtcgt gtgccgccaa aaacctgtga gtcccatcac agaaggcttg aggcgaagcc
      661 gcactttgtc aacgcaggga gaaacaccat ggccagcacc agaagttttt tcagcggagt
      721 gaccgtcggc gcgggtctgg tctatttcct cgacccggag cggggtcgaa tgcggcggga
      781 acagttccgg cgccgtatca gccccatgct cgacgaggcg cgccaagcat tcggtctgac
      841 gaccgacgta agtgttacgc cgggagcgct gcgctatggc tcccgggtcg gtgacattca
      901 gggactcggt gccgcgacgc tgagcagcgc cactggcggc gacatcgatc ctgccgcctc
      961 ggtctggcgg gtagccggaa cgctgatcgc agtgtacggg ctgatccggc ggggagccgt
     1021 tggcggattg ctgcgcacct tgggcacggg gatgctggtc gggagtacgc gagagaccat
     1081 gacgggtctc ggtgggcggt cacacgatcg gcgccgggca gtggatattc agaagacgct
     1141 cttcatcgac gcgccgatcg aacaggtcta cgggttctgg accaactacg agaactttcc
     1201 gctattcatg tcgcacgtcc gggaggtgga agaccgcggc aacggacatt cccactggag
     1261 agtcagcggg cccggcggag ttcccatcga atggaacgcc gtgctgacgc agcagacccc
     1321 caacgaggtc atcgcgtggc ggagcgaggc cggctcgatg ttggagaacg ccggcatcat
     1381 ccgcttcacg tcggtgggtg gcggcaccag ggttgacctc cggttctgct accatccacc
     1441 cgccggtggg gctggtcagg ccgtggtgga gctgctgggc tccgacccta gggcaaagtt
     1501 gaacgaagac ctcggacgca tgaagtcgct gctcgaggct actaccagga gtgaatcaca
     1561 tggcaaagaa tctcagccgt aagtatgcca ctatgagcga cgacgaacgt cgtcgttttg
     1621 ccttggagga ggacgaagcc tccaccgagc tgccggcgga gctctccttc gaggagcccc
     1681 ggaaggagga gaacatgggc cagca
//
LOCUS       DASRPQ010000826         1193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2291947, whole genome shotgun sequence.
ACCESSION   DASRPQ010000826 DASRPQ010000000
VERSION     DASRPQ010000826.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2291947"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            280..>1193
                     /locus_tag="VFD73_09445"
     CDS             280..>1193
                     /locus_tag="VFD73_09445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74231.1"
                     /translation="MQDIHEEMIHVNVNEVLTMLAVLATMLVVLLAISAKTRPIPGES
                     SKDGREKVRRLEELRIVVFLFGLVTMVALVAVYAGAAGSAWGFALALLPFIMIVQHAM
                     YLRNVRQPVLVPREAPPNGSPNAEPTSSGPIPAGPTSSHDDWWLSVLRSAKRTTERYF
                     SASSLAIRYGASAVAVLMVGLVAFLFIFVPELPGASGTTILEEQKLVHPAMLGAAGAY
                     VYVLLHLGHRNLTHDVTSGGAMWCSISLAIGPILACAISYFLIGTSQDPSLGADAIYF
                     MAGLSPRYVTSRVEALVRKAWGAPSEIVP"
BASE COUNT          203 a          379 c          389 g          222 t
ORIGIN      
        1 ggatctctcg ggtccggccc atcgatgcgc cgagcccgca cgaggtgcgg aacggttccc
       61 gcggtgcgca gcgcctgcgc ggatggcgag acggctctgc gcggcgcgag gcagaccgct
      121 cggtaaggac gcaggatcga acagccctgc gccaggtccc cgagtcggtc ggctggcgtg
      181 gcagctgcaa atgccctcgt cggcgcaggt gatcggacct gcccgctacc cgaccggcgc
      241 tgttctctgc acctccaggg ctgaagacga gagggtgtca tgcaagacat tcatgaagaa
      301 atgattcatg tgaatgtgaa tgaggtgctc acgatgttgg ctgtcctggc cacgatgctc
      361 gtggtgctcc tcgcgatcag cgccaagacc agaccgatcc ccggcgagtc gtccaaggac
      421 gggcgcgaga aggtgcgaag gctggaggag ttacgcatcg tggtcttctt gttcggcctc
      481 gtcaccatgg tggccctcgt ggctgtttat gcaggtgccg cagggagcgc gtggggattc
      541 gcactggcgc tcctgccatt catcatgatc gttcaacatg caatgtatct gcggaacgta
      601 cggcagccgg tcctggtacc gcgcgaggcg ccaccgaacg gatccccgaa cgccgagccc
      661 acctcatccg gccccatccc agccggacca acgtcatcgc atgacgattg gtggttgtcg
      721 gtgctcagat cggcaaagcg gaccaccgag cgctacttca gcgcgagcag cctcgcgatc
      781 cgctacggcg catccgccgt ggcggtcctg atggtcggat tggtggcatt cctgttcatt
      841 tttgtccccg agctccccgg ggcgagcggg acgaccatcc tggaggaaca aaagctggtc
      901 caccccgcga tgctgggtgc agcgggcgca tacgtgtacg tgctgctcca tctggggcac
      961 cgaaacctga cccatgacgt gaccagcggt ggcgcgatgt ggtgcagcat ctcgctcgcc
     1021 atcggcccga tcctggcgtg cgcgatctcg tacttcttga tcggtacctc tcaggacccc
     1081 agtctgggtg ccgacgcgat ctatttcatg gccgggctct ctccgcgcta tgtcacctca
     1141 cgggtggaag cgctcgtgag aaaagcgtgg ggcgccccca gcgagatcgt acc
//
LOCUS       DASRPQ010000827         2448 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2918356, whole genome shotgun sequence.
ACCESSION   DASRPQ010000827 DASRPQ010000000
VERSION     DASRPQ010000827.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2448
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2918356"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..569
                     /locus_tag="VFD73_09450"
     CDS             <1..569
                     /locus_tag="VFD73_09450"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HZI74232.1"
                     /translation="ALFLGRITDALVQQSEIGGRAFFRNAGKTHNDGAEVGLSVTPFD
                     GLTLNGAYTYAHYRFTDYQLADGTVLNGNRLPGVPEDFWRLGLRAALPYDFYVDADHT
                     ISSSIVADDANTIWVNAWGAGVTNLRVGWNGRSGQMEIGPFLGVNNLWDRRYVGSVTL
                     NGAFGRVLEPAPRRVIYLGTEIGYATAP"
     gene            complement(571..>2448)
                     /gene="priA"
                     /locus_tag="VFD73_09455"
     CDS             complement(571..>2448)
                     /gene="priA"
                     /locus_tag="VFD73_09455"
                     /inference="COORDINATES: protein motif:HMM:TIGR00595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005658 - alpha DNA polymerase:primase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HZI74233.1"
                     /translation="LTERTLVLTGDRPTLIERDLLFKRRPKQRQLYEMLESLGGSASI
                     RHLSDQLGFGDGVVRSLVRQQLARIGTVELVRDPFADSPLTPPPPTLNPDQQAALAAI
                     TELGAGQGALLFGVTGSGKTLVYLEAVRRVLSSGQGAIVLVPEIGLTPQTVSRFRGAF
                     GDEIAVLHSGLSEGERADAWRLLHRGERRVAVGARSAIFAPVARLGLIVIDEEHEASY
                     KNGESPRYHARDVAAVRARLEGARLLLGSATPSLETFALTESKLRLLRLPQRVGARPL
                     PPVEIVDLRTAPKVEGTGAVSWSQALDGSIEATLARQEQALLLLNRRGYAAFLQCPDC
                     GEVWQCSRCSISLTVHQSPPGLRCHYCGHEEPLPLTCRVCANPVQHMRGIGTQQLERM
                     LLERYPTARIARMDLDTTSTKWSHQRILGAVEQGTVDLLIGTQMIAKGLDFPNVTLVG
                     VVDADTGLYLPDFRSAERTFQLLAQVAGRAGRGPKGGRVLIQTRHPTHHALVWAAQHD
                     TDGFLREEAAQRETPAYPPMAALVNLIYSGPEEREVSRRTASLADWCTGLIRKHALPI
                     AVLGPAPCPLVRLKDRWRWHVLLRGPSESLGRVVRYAARRLKREGKTRLVIDRDPVSL
                     L"
BASE COUNT          458 a          790 c          768 g          432 t
ORIGIN      
        1 tcgcactgtt tctgggacga attaccgacg cgcttgtcca gcagtcggag atcggcggcc
       61 gggcgttctt ccggaacgcc ggaaagactc acaacgacgg ggcggaggtg ggtctctcgg
      121 tgacaccgtt tgacggtctg acgctaaatg gtgcctacac ctacgctcac tatcggttta
      181 ccgactatca actcgccgac ggcaccgtcc tgaatggcaa tcgccttccg ggagtgcccg
      241 aggatttctg gcgactgggc ctccgtgcgg ctctgccgta tgacttctac gtcgatgccg
      301 accacacgat cagctcgtcc atcgttgccg acgacgccaa caccatctgg gtgaatgcct
      361 ggggtgcggg cgtgaccaac ctgcgggtgg gatggaacgg ccggtccgga cagatggaga
      421 tcggcccctt tctgggtgtc aacaatcttt gggaccggcg ctacgttgga tcggtcacgc
      481 tgaacggagc gtttggccgg gttctcgagc cggcgccaag gagggtgatc tatctcggga
      541 ccgagatcgg ctacgccacc gccccatagt tcacagcagc gaaaccggat ctcgatcgat
      601 caccaagcgc gtcttgcctt cccgcttgag tcgccgagcc gcataccgca ccacccgacc
      661 cagcgactct gaaggacctc tcaacagaac gtgccagcgc cagcgatcct tgagccgcac
      721 cagtgggcag ggcgctggcc cgagcaccgc aatcggaagc gcatgcttcc gaatcaaccc
      781 ggtacaccag tcagccaggc tcgcagttcg ccggctgacc tcccgttcct ccggcccgga
      841 atagatcaga ttgaccagcg cggccatcgg ggggtacgcc ggtgtttcac gttgggccgc
      901 ttcttcccga agaaacccat cggtgtcgtg ctgcgcggcc cagaccagcg cgtgatgggt
      961 gggatgccgc gtctggatga gcacccgccc acccttggga ccgcgtcccg cgcgtccggc
     1021 aacctgagcc agcaattgaa aggtgcgctc cgccgaacgg aaatccggca gatacagacc
     1081 ggtgtccgcg tcgaccactc cgaccagagt gacgttggga aaatcgagcc ccttcgcaat
     1141 catctgcgta ccaatgagga ggtcgaccgt tccctgctcc accgctccga ggattcgctg
     1201 gtgggaccac ttggtactgg tggtatcgag atccattcga gcgatccgag cagtgggata
     1261 gcgttcgagc agcatccgct ccagttgctg ggttccaatc cctcgcatgt gctgaaccgg
     1321 attggcgcag acacgacaag tgaggggaag cggttcctca tgcccgcagt aatggcagcg
     1381 cagtcccggc ggcgactggt ggacggtcaa tgagatgctg cagcgggaac actgccagac
     1441 ctcaccgcag tcagggcact gcaggaatgc agcgtagcct cgtcggttga ggagcagcaa
     1501 cgcttgctcc tgccgggcga gggtggcctc gattgaaccg tcgagcgcct gtgaccagct
     1561 caccgcgccg gtgccttcca ctttcggagc agtgcgcaga tcgacgattt ccaccggagg
     1621 aagcggcctc gcacccacgc gctgcggcag ccggagcagc ctgagcttgc tttcggtcag
     1681 agcaaatgtc tccaacgagg gcgtggcact gcccaatagg agccgcgcgc cttcgaggcg
     1741 ggccctcacc gcggcgacat cacgggcgtg atagcgcggt gattctccat tcttgtagct
     1801 ggcctcgtgc tcctcgtcga ttacgatcaa gcccagccga gcgaccggtg caaagatcgc
     1861 ggagcgcgca cccacggcca ccctgcgctc cccgcggtgc agcagacgcc acgcatcggc
     1921 acgctcgcct tccgagagac cgctatgcag tactgcgatc tcatcgccga aggcaccccg
     1981 gaatcggctg accgtttgcg gagtgagccc gatctcgggc accaggacga ttgccccttg
     2041 ccccgacgag agcacccgcc gcaccgcttc gaggtagacc aacgttttgc cgctgccggt
     2101 gaccccaaag agcagtgcac cttgtccggc acccagctcg gtaatcgcgg cgagagctgc
     2161 ttgctgatct ggattgagcg tcggaggagg tggggtcagc ggtgaatcag cgaagggatc
     2221 gcgaaccagc tccactgtac cgatgcgagc cagctgctga cggaccagcg agcggactac
     2281 accatcgccg aatccgagct ggtcggagag atgccggatc gatgcgcttc cccctagcga
     2341 ttcgagcatc tcgtagagct gccgctgctt gggccggcgt ttgaagagga gatcccgctc
     2401 gatcagcgtc ggccgatcac cggtgagtac gagtgtacgt tcggtgag
//
LOCUS       DASRPQ010000828         1564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1038094, whole genome shotgun sequence.
ACCESSION   DASRPQ010000828 DASRPQ010000000
VERSION     DASRPQ010000828.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1038094"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..341
                     /locus_tag="VFD73_09460"
     CDS             <1..341
                     /locus_tag="VFD73_09460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74234.1"
                     /translation="DEPAFVRAILAERKCYLLSDVMAGSRLSITSSTTTASVEPGLTA
                     RARQRFPALRANPRELRQRDPAVATCATPSPPSSDSPRLPDLVLTMRSRLTAAFLRVS
                     GGRYVAQLGT"
     gene            complement(849..1124)
                     /locus_tag="VFD73_09465"
     CDS             complement(849..1124)
                     /locus_tag="VFD73_09465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74235.1"
                     /translation="MLELAVCGQSVPGSGGSWCLLSRKPSCDPRVVGDTAWLRGNVRA
                     ITFPLAALLVSDGDRVLRERVGNLLQCEPVPTLYSKEVLTAGQFGLL"
     gene            1334..>1564
                     /locus_tag="VFD73_09470"
     CDS             1334..>1564
                     /locus_tag="VFD73_09470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74236.1"
                     /translation="MTSESVRDPLADHLLTPQNCALVIIDYQPVQVRSVRSMDPGLLV
                     DRVVHLARFGMLYRLPVVLSTVNVSTGRNQPTI"
BASE COUNT          316 a          517 c          476 g          255 t
ORIGIN      
        1 gtgatgagcc agccttcgta cgcgccattc tggccgagcg gaaatgctac cttttgtcgg
       61 atgtgatggc cggatcacgg ttgagcatta cgtcgagcac aacgacagct tctgtcgagc
      121 ccggcttgac cgctcgcgcg cgacagcgct tcccggccct gcgggctaat ccgcgcgaac
      181 tgcgccagcg cgacccagcc gtagctacgt gcgccacgcc gtcgccgccg tcatcggaca
      241 gcccgcgcct acctgacctc gtactgacca tgcggtctcg cctgacagcc gcattcctgc
      301 gggtttccgg cggtcgctac gtagcccaac tgggaacctg actggctgcc aacagccacc
      361 ggaaaggggg cccgccccgg cgcagtcgga accgatgccg ccccgagcac atcaggccag
      421 caccgccacc cgccgggaac ccgccagcca gttcccacaa ccgaaaacgg cataacacga
      481 tcagtaacca acctcgccca acccctgaat cattgaggct ggcatggata acaaccgatg
      541 actgggccta cgctgtacgt gcactggtag atcttggtcg taagccactc gctgaaagcc
      601 tgggctttcg cctgcccagt gagctgacct aaaagcggaa gatgtggcgc cgctactctc
      661 gaatggtgag gcagccgtat caggcggacc gcgccgacgc tttggaggag ttccggtcgc
      721 aaggtcccga gcaacgcgag gatccggata tcacaggcgc ggcgccgagt gccgatagcg
      781 aagaccgaga tgccggggat aagccgatta catcaccatg aagtttcgat gaccgaaatc
      841 gtcttcagct acagtagacc aaactggccg gcggtaagga cctccttcga atagagggtg
      901 ggtacgggct cgcactggag gagattgcca acgcgctcgc gcaggacacg atcgccatca
      961 ctgaccagga gcgcggcgag cgggaaggtg atcgcccgca cgttcccgcg tagccaggcc
     1021 gtgtctccga ccacgcgggg atcgcagctc ggcttccggc tgagcagaca ccaagatcct
     1081 ccactgcccg gcaccgattg gccgcagacg gctagttcta acatctcacc tgacaatgtg
     1141 ttaggaaccg gaacaacggg tttgatgaag atcctggcat agctacagac caggcccgtg
     1201 gacgcggtgg tcagagcgcg ggcctatggc gcgacagcca gcatcgcttt tactggcggg
     1261 cgcgggccgg atggactggc ggataacgat aggcggcccg ctgcctgtcc aaccgccggc
     1321 gaggaggcat ctcatgacga gtgagtccgt ccgcgacccg ctcgcagacc atctgctcac
     1381 accgcaaaac tgcgcgctgg tcatcatcga ctaccagccc gtccaggtca ggtcggtcag
     1441 atccatggat ccaggcctgc tggtcgacag ggtcgtgcac ctggcccggt tcggcatgtt
     1501 gtaccggctg ccagtggtgc tgtccacggt caacgtcagc accggccgga accagcccac
     1561 catc
//
LOCUS       DASRPQ010000829         1012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2918526, whole genome shotgun sequence.
ACCESSION   DASRPQ010000829 DASRPQ010000000
VERSION     DASRPQ010000829.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2918526"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="VFD73_09475"
     CDS             complement(<1..346)
                     /locus_tag="VFD73_09475"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZI74237.1"
                     /translation="MKLPQLSFVTLGVSDLSGATQFYGEGLGLKQLKSLPAASFFDLG
                     SVRLALYRLDLLADDAGVPLQNSLPSGVALGYNVASQAEVDGFLLRAQRAGGRLLRPA
                     GPTGWGGYAGYFA"
     gene            522..>1012
                     /locus_tag="VFD73_09480"
     CDS             522..>1012
                     /locus_tag="VFD73_09480"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HZI74238.1"
                     /translation="MMLERIRTIVVDDHDELGRLVARRIADLIRARSSAGKPAVLGLA
                     TGSTPLGVYRELIRMHREENLSFANVVTFNLDEYYPMDPGSIHSYHRFMWENLFAEID
                     IDPDNVHIPRGDVPRECIAEECQRYEHAIQAAGGIDLQLLGIGRTGHIGFNEPGSGAD
                     SRTR"
BASE COUNT          198 a          326 c          322 g          166 t
ORIGIN      
        1 cggcaaaata gcccgcgtat cctccccagc cagttggacc ggccggccga agcagccgcc
       61 cacccgctcg ctgggctcgc aggaggaagc catcgacctc cgcctgggag gcgacattgt
      121 accccaaagc cacgccagac ggcagcgagt tttgcagcgg aacacccgcg tcgtccgcca
      181 gcaggtcgag gcggtagagg gccagacgga cgctgccaag gtcgaagaat gaagcagcgg
      241 gcagcgattt gagttgcttc aggccgagtc cctcgccata gaactgggtg gccccggaca
      301 ggtcgctcac accaagggtg acgaaactga gttgcggcag cttcataact ctccagcctg
      361 caggtgccta cggcaatgag gccggccgat gactcggctg gcgttcagga attctccggg
      421 gacgcacaag gcgcgtgttt ggcccatgga ttgcgtggtg aacagatcac gcttgccgaa
      481 aattgactgg ttcctctcat gacatcaacc gagtcccagg gatgatgctc gagcgaattc
      541 gcaccattgt agtggatgat cacgacgagc tcggccggct ggtcgctcgt cgcattgccg
      601 atctgattcg ggcccgaagc agcgcgggca agccggccgt cctcggcctg gctacggggt
      661 cgaccccgct cggcgtctac cgcgagctga tccgaatgca ccgcgaggag aatctcagct
      721 tcgccaacgt ggtcacgttc aatctcgacg agtactaccc gatggacccc ggcagcatcc
      781 actcctacca ccggttcatg tgggagaacc tgttcgccga gatcgacatc gatcccgaca
      841 acgtgcatat cccccggggc gacgtgcccc gcgagtgcat tgcggaggag tgccagcggt
      901 acgagcatgc gatccaggcg gcgggcggga tcgacctcca gcttctgggc atcgggcgca
      961 ccggccatat cggtttcaac gagccgggct ccggcgcgga cagtcggacc cg
//
LOCUS       DASRPQ010000830         1461 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_98854, whole genome shotgun sequence.
ACCESSION   DASRPQ010000830 DASRPQ010000000
VERSION     DASRPQ010000830.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98854"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            229..981
                     /locus_tag="VFD73_09485"
     CDS             229..981
                     /locus_tag="VFD73_09485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74239.1"
                     /translation="MSLRLLYLISARLCSWLALLGRSSASKDAELLVLRHEIAVLRRA
                     SSRPRLDWADRAVLAALVRLLPARLRAHRLVTPGTVLRWHRRLVSRKWICPNRTGRSP
                     VSAEIAALIEQLATENNGWGYKRIQGELLKLGHRVGASTIRRVLKALKTPPAPERRSD
                     MTWRKFLHTQAPTMLATDFFHAGCAVTLQRLYCLFVMEVGSRYVRILGITANPDGPWT
                     VQQIRNLLMDLGDRTVGFRFLVRDRAGQFSVV"
     gene            1013..1294
                     /locus_tag="VFD73_09490"
     CDS             1013..1294
                     /locus_tag="VFD73_09490"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HZI74240.1"
                     /translation="MKIPPRSPRANAYAERFVLTARTEVTDRMLIFGERHLRTILAEY
                     EGHYNGRRPHRSRHLRPPRPDHPVADLSQERIQRWPVLGGLINEYERAA"
BASE COUNT          251 a          508 c          453 g          249 t
ORIGIN      
        1 cccccacggc atctggcagg tgaagacaaa gctcccgcac cgcgtgggcg agacgggaca
       61 tccgcgcagg cgcttctggc gtcaacagga aatatatggc cgacgcgtaa tactcagcga
      121 gaagctaact acgctcagct agccaggcat gcatgtgggt gccagaagtc tgcctggcct
      181 gtgagctgct gttatgacca ggtcgattgt gcggcatgat gatcatcgat gtctctccgc
      241 ctgctctacc tcatctccgc gcggctgtgc agctggctgg ccctgctcgg ccggtcatca
      301 gcctccaagg acgccgagct gctcgtgctg cggcacgaga tcgccgtgct gcgccgtgcc
      361 agttcccggc cccggctcga ctgggccgac cgcgcagtcc tcgccgcgct ggtccggctc
      421 ctgccggcaa ggctgcgagc gcaccggctg gtcacccccg gcaccgtcct gcgctggcac
      481 cgccgcctgg tcagccgcaa gtggatctgc cccaaccgga caggacggtc gccggtcagc
      541 gccgagatcg ccgccctcat cgagcagctc gccaccgaga acaacggctg gggatacaag
      601 aggatccaag gcgagctgct caagctcggc caccgggttg gtgcgtccac gatccgcagg
      661 gtcctcaagg cgctgaagac tcccccggca ccagagcggc gctccgacat gacgtggcgg
      721 aagttcctgc acacccaggc accgacgatg ctcgccacgg acttcttcca cgccggctgc
      781 gcggtgaccc tgcagcgact gtactgcctg ttcgtcatgg aggtaggcag ccgttacgtg
      841 cgcatcctcg ggatcactgc gaacccggac ggtccgtgga ccgtgcagca gatccgcaac
      901 ctgctgatgg atctaggtga tcgcaccgtc ggcttccggt tcctggtccg tgatagggcc
      961 ggtcagttca gcgtcgtttg acgccgtcct ggccgatgcc ggaatccagg ccgtgaagat
     1021 cccgccccgc agcccacgcg cgaacgctta cgcagaaagg ttcgtgctca ccgcccgtac
     1081 cgaggtcacc gaccggatgc tcatcttcgg cgagcggcat ctgcggacga tcctggccga
     1141 gtatgagggc cattacaacg gacggcgacc ccaccgcagc cgccatctcc gcccgccccg
     1201 gcccgaccac cccgtcgcgg acctctccca ggagcggatc cagcgctggc ctgtcctcgg
     1261 cggcctcatc aatgagtacg agcgagccgc atagaagcgc aggtcaggac cggcggccga
     1321 gttctggaac cccacagggt cgccacctgg tggtagcggg acttgaggat tgcttctgct
     1381 gagctcagtg agccgcgtcg ccagcacaaa gttgatctct gtatccagat tatcgagttt
     1441 catctgcatc tgccggagtc t
//
LOCUS       DASRPQ010000831         1020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4495117, whole genome shotgun sequence.
ACCESSION   DASRPQ010000831 DASRPQ010000000
VERSION     DASRPQ010000831.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4495117"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..475)
                     /locus_tag="VFD73_09495"
     CDS             complement(<1..475)
                     /locus_tag="VFD73_09495"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family ligand binding domain-containing
                     protein"
                     /protein_id="HZI74241.1"
                     /translation="MTVPADSAKDQVQTATTGLVNLRENSRWVGGSLIYDGGERLVTG
                     WHFHDVHEIEYAIRGMVEVKTEAGHYLLPPHQAAWIPAGLHHQTTLNAGMQTLAVLFE
                     PRLVPMAGDRVRIIAVSALLREMMRYSVRWPISRTESGMEADSFFQTLGYVVAEAL"
     gene            567..>1020
                     /locus_tag="VFD73_09500"
     CDS             567..>1020
                     /locus_tag="VFD73_09500"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HZI74242.1"
                     /translation="MPTLIYSMSVSLDGHIAGPDGAIDWAAPDEELMRFHNEQTRELT
                     GHLSGRGLYEDMLGWETAEQTRTDPQELEFARIWKAIPKVVFSTSLTSVEGNARLARR
                     DVADEVAELKKQPGASIVSVGGARLAASLAEKDLIDEYRLFVNPVVLGG"
BASE COUNT          205 a          320 c          312 g          183 t
ORIGIN      
        1 ccagcgcctc cgcgaccaca tacccgaggg tctggaagaa cgagtctgct tccatccccg
       61 actcggtacg cgagatcggc catcgcaccg agtagcgcat catctcgcga agcagtgcgg
      121 agacggcaat gatccgaacc cggtctccgg ccatcggaac gagccttggt tcaaagagca
      181 ccgcgagggt ctgcatacca gcgttcaagg tcgtctgatg atgcaggccc gccgggatcc
      241 acgccgcttg gtggggtggc agcaggtaat ggccagcctc cgtcttgacc tccaccatcc
      301 cacggatggc gtactcgatc tcgtgcacgt cgtgaaagtg ccagccagta accagtcgct
      361 cgccgccgtc atatatgagg ctgcctccca cccagcgact attttcccgc aggttcacca
      421 agccagtggt ggccgtttga acctgatctt tggccgaatc agcagggacg gtcatacctc
      481 gggaagttta cagtcggttt ctaacgcagg ccgtgctctc gctggtgatc gaggacacgc
      541 cgagtaagcc gagtaaagga ggcctgatgc ctacgttgat ctactccatg tccgtgtcgc
      601 tggacggtca catcgccgga ccggacggcg ccatcgactg ggccgcgcct gacgaggaac
      661 tgatgaggtt ccacaacgag cagacccgag aactcaccgg gcacctgtct gggcgggggc
      721 tttacgagga catgcttggc tgggagacgg ccgaacagac ccgcaccgat ccacaggaac
      781 tcgaattcgc ccgcatctgg aaggccatcc cgaaagtggt gttctcaacc agcctgacgt
      841 cggtagaagg taacgcccgc ctggcgcgca gggatgtcgc tgacgaggtc gctgagctga
      901 agaagcaacc tggcgccagc atcgtgtccg tcggcggtgc caggctcgcc gcctccctgg
      961 ctgagaaaga cctcatcgat gagtaccggc tgttcgtaaa tcccgtcgtg ctgggaggcg
//
LOCUS       DASRPQ010000832         1420 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3544652, whole genome shotgun sequence.
ACCESSION   DASRPQ010000832 DASRPQ010000000
VERSION     DASRPQ010000832.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1420
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3544652"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..367
                     /locus_tag="VFD73_09505"
     CDS             <1..367
                     /locus_tag="VFD73_09505"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI74243.1"
                     /translation="GDKNHAIQRMDEALDGYQRVGATIDTARIRRRLRRLGVRRRHWA
                     SGAGRPVSGWASLTETEQAAAELVAQGLTNQEIADRMYISVHTIAVHLRRIFSKLGIR
                     SRVELTRIVFDQAIQPKAG"
     gene            complement(529..1119)
                     /locus_tag="VFD73_09510"
     CDS             complement(529..1119)
                     /locus_tag="VFD73_09510"
                     /inference="COORDINATES: protein motif:HMM:NF025774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MEDS domain-containing protein"
                     /protein_id="HZI74244.1"
                     /translation="MGSRAPDIADLDFQVGDHVCAFYNGGGSILDDIVVDYASRGLRA
                     GNKCACLSFADTASSVRDRIPPELMSREDILQFITENQAEGGFSVEAGLRTLEAMAKE
                     ALSDGYGRLWLLGDATFVARDLPPTSMKTWFTYEAAAIELAPRYPQFIMCLYDLDRWT
                     GELVMSVLQTHPRIFVNGMVLDNPYYVPLRQFLGSL"
BASE COUNT          254 a          448 c          469 g          249 t
ORIGIN      
        1 gggagacaag aaccatgcca tccagcgcat ggacgaggct ctcgacggct accagcgcgt
       61 cggcgcgacc atcgacacgg cccgcatcag gcgacggctg cgcaggctcg gcgtgcggcg
      121 ccgccactgg gcgtcaggag ctggcaggcc cgtctccggg tgggcgagcc tgaccgaaac
      181 cgagcaggcc gcagccgaac tcgtcgcgca aggactaacc aaccaggaga tcgccgaccg
      241 gatgtacatc agcgtccaca ccatcgcggt ccacctgcgc cgcatattca gcaaactcgg
      301 catccgctcg cgcgtcgagc tcactcggat cgtattcgac caggcgattc agccgaaagc
      361 tggctgaatc gcgtcgggaa agcgatgggt tgagcgtgac catttgctac ttcctgcatg
      421 gttggagctg cctgcctgcc gggccgcaag cccagataat gatccacgct cccggagcat
      481 cgtgcgggag acccggcgtg cccggctcga tacgcggcgc ggctgacgtc agagactgcc
      541 gaggaactgg cgcagcggga cgtagtacgg attgtcgaga accatcccgt tgacgaagat
      601 ccggggatga gtctgcagca cgctcatgac cagttcgcca gtccaccggt caaggtcgta
      661 caggcacata atgaactgcg ggtaccgcgg cgcgagctca attgctgctg cttcgtaggt
      721 gaaccacgtc ttcatggatg tggggggcag gtctctggca acgaaagtcg catcgccgag
      781 cagccagagg cggccgtacc cgtcggagag cgcctctttg gccatcgcct ccagcgtgcg
      841 gagacctgcc tctacggaga agccgccctc agcctggttt tccgtaatga actgcaggat
      901 atcctctcgc gacatgagct cggggggaat ccggtcgcgc accgaggacg ccgtgtcggc
      961 gaagctgagg caggcgcatt tgttccccgc ccgcagcccc ctggaggcgt agtccacgac
     1021 gatatcgtcc aagatgctgc cgcccccgtt atagaaggcg cagacgtggt cgccgacctg
     1081 gaagtcgagg tcagcgatgt ccggtgctcg cgagcccatg gttctcctct cgagactgct
     1141 cgcatggctc gggccgggag tgcccgggcc gaccctcccc actggggttg gccgaccgga
     1201 tcagccctcg tcgcgagggg tagcggtcgg ctcggccgcc gtgcacgttc ttggcgtgtg
     1261 cggatcctgg gtgaggagta gcttgctgta ccgcacccag caggacaagg accattactg
     1321 caggtgcagt gaagtctcct cttgatggag gcgcggcgct accggattcc cgctggagtt
     1381 gtgtccattg ctgcatggtt ggatttggtt gccttgtccg
//
LOCUS       DASRPQ010000833         1859 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3239307, whole genome shotgun sequence.
ACCESSION   DASRPQ010000833 DASRPQ010000000
VERSION     DASRPQ010000833.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3239307"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            51..1373
                     /locus_tag="VFD73_09515"
     CDS             51..1373
                     /locus_tag="VFD73_09515"
                     /inference="COORDINATES: protein motif:HMM:NF020337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CotH kinase family protein"
                     /protein_id="HZI74245.1"
                     /translation="MWKTDPADHRRIPAIDSESVLFSTQAFTLKNSGNRTLRAPKRSW
                     RIILDAPGYSNRLAGMTRINLKAMYNDPSQMREALAWRLFGIAGIPAPQHTYAKLAFD
                     ETYRGLFSVIEHVDKKFLRDHFGENYRGNLYKTGCRDIGCASLAYRTGPDGDDSGRQY
                     FIPGPAERTYRLKTNKNNPEASTYDDLACFIRTINGIGLPGGEERFETDAFRESVDGI
                     MNVNAFLRWAAVNMLLGSWDNYYATPSNYYLYNSGHSGADDFVSSPYFHFIPWDYDNC
                     LGIDYSGTRWQYADILDWPGKANRHIPKIPLVRNLLRNHDYRQYYLDYLEHMLDTEFN
                     PRAIAAQIGARAEDGLWHRVRQAAYLESATPHGRPFTGRRYSNHEIYESGCRQRELQH
                     GKKKMEGIVHYVRMRHDSARAQLKRIRRTTPRTVDGFPPGVEQLPRAA"
     gene            1459..>1859
                     /locus_tag="VFD73_09520"
     CDS             1459..>1859
                     /locus_tag="VFD73_09520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74246.1"
                     /translation="MDRTGRSRGEAGTRVTTTGQGAAGYVHALFQQRVDGDDALLKLA
                     GLRFAQMGAAAEVYAETPDKLEHVLQFVPYHTRLPIVHLSRGINVLHGRDRAVVREFA
                     ARFAGRVAGLVVHDKREMGAQTDRLLAGMREL"
BASE COUNT          381 a          563 c          580 g          335 t
ORIGIN      
        1 atcgtgtcct gacagagcca gtgaagcctg ccgacggtgc cagggtcgac gtgtggaaga
       61 ccgatccggc cgatcaccgg cgcattcctg ctatagacag cgaaagtgtt ttgttcagca
      121 cacaggcttt cacgctcaaa aatagcggaa accgcacact gcgcgcgcca aaacggtctt
      181 ggaggataat tcttgatgcc cctgggtaca gcaaccggct ggccggcatg acacggatca
      241 atcttaaagc aatgtacaat gacccttccc agatgcgcga agcgctggcc tggcgcctgt
      301 tcggtatagc tggcattccg gcgccacagc acacgtatgc aaagctggcc tttgacgaaa
      361 cctacagggg cctcttctcc gtcatcgagc atgtcgataa gaagtttctg agggatcact
      421 tcggtgagaa ctaccggggc aacctctaca agactggctg ccgcgacatc gggtgtgcgt
      481 ctctggcata ccggaccggg cctgacggcg atgactcggg gcgccagtat ttcatcccgg
      541 gacccgcgga gcgcacctac cgtctcaaga ccaacaagaa caaccccgag gccagcacgt
      601 acgacgacct ggcctgtttc atcaggacga tcaacggcat cgggctgccg ggcggcgagg
      661 agcgtttcga aaccgacgcc ttccgcgagt cggtggacgg catcatgaac gtcaatgctt
      721 tcctgaggtg ggcggccgtc aacatgcttc tcggaagctg ggacaactat tatgcgaccc
      781 cgtcaaatta ctatctctac aactcggggc acagcggggc cgatgatttc gtcagctctc
      841 cttatttcca cttcataccc tgggactacg acaactgcct cgggatcgat tattccggca
      901 cacgatggca gtacgccgat attctcgact ggccgggaaa agctaaccgc cacatcccga
      961 agatcccact cgtgcggaat ctgctccgca accacgacta ccgccagtac tacctggact
     1021 atctggagca catgctcgat accgagttca acccgagggc aattgccgcg cagatcgggg
     1081 cacgcgctga ggatgggctg tggcaccggg tccggcaggc ggcctatctg gaatctgcta
     1141 cacctcatgg gcggccgttc accggtcggc ggtacagcaa ccatgagatc tacgagagcg
     1201 gttgtcggca gcgcgaactt cagcatggga agaaaaagat ggagggcatt gtccactacg
     1261 ttcgcatgcg ccatgacagt gcccgtgcgc agctgaagcg gataaggcgg acgacaccgc
     1321 gcactgtcga tggctttccc ccaggggtgg agcagctgcc gcgggcggcc tagtgccgtc
     1381 cgggcctgcc tctgactcat gcgagggtaa gggtaagcga ggagaaggcc gttctgcggc
     1441 gctgcgggag tgagggttat ggatcgtacc ggacgaagcc gtggcgaggc cggcaccagg
     1501 gtaacaacca ctgggcaggg ggcggccggt tacgttcacg ccctgttcca gcagcgcgtc
     1561 gatggggacg atgcgctgct caagctcgct gggctgcgct tcgcccagat gggcgcggcc
     1621 gccgaggtgt acgccgagac gcctgacaag ctcgagcatg tcctgcagtt cgtgccgtac
     1681 catacgcgct tgcccatcgt ccacctgagc cgtggcatca acgtgctgca cgggcgggac
     1741 cgcgcggtgg taagggagtt cgccgctcgc ttcgcaggac gcgtcgccgg cctggtcgtc
     1801 cacgacaaac gtgagatggg ggcacagacg gaccgcctgc ttgccgggat gcgcgagct
//
LOCUS       DASRPQ010000834         1042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_413615, whole genome shotgun sequence.
ACCESSION   DASRPQ010000834 DASRPQ010000000
VERSION     DASRPQ010000834.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1042
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_413615"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /locus_tag="VFD73_09525"
     CDS             complement(<1..228)
                     /locus_tag="VFD73_09525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter permease"
                     /protein_id="HZI74247.1"
                     /translation="MRAYIALILLLVIFSVLSPAFLTPGTLTILASHVALNAILALGM
                     TFVILTGGIDLSVGSIVGLAAMVAGGLIDQGL"
     gene            complement(320..>1042)
                     /locus_tag="VFD73_09530"
     CDS             complement(320..>1042)
                     /locus_tag="VFD73_09530"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI74248.1"
                     /translation="LLDSISFSLRAGEMLGIYGLMGAGRTELLESLIGLRPEALGSVR
                     LGGKELMGRTISERIRDGLVLVPEDRQRAGLVQTLSVSSNMTLASLRAYTQGFFLSEL
                     KERLNVKRVIEELSIKVFSPSQIITSLSGGNQQKVVVGKALLTAPKVLLLDEPTRGID
                     VGAKADMFGIMSDLAAKGLGVLFVSSELLEVRAMADRILVMSKGKITGEFSREEATEE
                     ALVTASAVGHKLNQTGVENNGD"
BASE COUNT          213 a          339 c          301 g          189 t
ORIGIN      
        1 cagtccctgg tcgatcaggc cgcccgccac catcgccgcc aggcccacaa tggagccgac
       61 ggataagtcg atgcccccgg tcagaataac gaaggtcatg ccgagagcca ggatggcgtt
      121 gagcgccaca tgcgaggcca agatggtcag ggttcccggc gtcaggaagg caggcgacaa
      181 caccgagaag atgacgagca gcaggatcag cgcgatatag gcacgcatcc ggagtagcaa
      241 cgaaaccggc gagatccgtt gtcgctgtat cacggcactg cctggggcgc ctgcgccggg
      301 gctcgaaggt acctggacgt taatccccat tgttctctac tcctgtctgg ttgagtttgt
      361 gcccgacggc cgaggcggtc accaatgctt cttccgtagc ttcttcccgt gagaactccc
      421 cggtaatctt gcctttagac atgaccagga tgcgatcggc catggcccgc acttccaaga
      481 gttccgagga gacgaacaac actcccaagc ccttagcggc caggtcgctc ataatcccaa
      541 acatgtcagc tttggcaccc acgtcgatgc cgcgggtcgg ctcgtcaagg agcagcacct
      601 tgggggcggt cagtagcgcc ttgcccacca ccaccttctg ctggttccct ccgctcaacg
      661 acgtgatgat ctggctgggg ctgaatacct tgatcgacaa ctcctcaatc acccgtttta
      721 cgttcaagcg ttccttcaac tcggaaagga agaaaccctg cgtgtaggca cggagactgg
      781 cgagcgtcat gttgctgctg accgagagcg tctgcaccag ccccgcgcgc tgccgatcct
      841 cgggtaccag cacgaggccg tcgcggatcc gctctgagat tgtgcggccc atcaattcct
      901 tgccgcccag ccggacactc cctagcgctt cgggccgcag gccgatgagc gactccagca
      961 gctcggtccg cccggccccc atgaggccgt agatacctaa catttcgccg gcccgtagcg
     1021 agaacgaaat ggagtcgagc ag
//
LOCUS       DASRPQ010000835         1041 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_99424, whole genome shotgun sequence.
ACCESSION   DASRPQ010000835 DASRPQ010000000
VERSION     DASRPQ010000835.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99424"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            698..>1041
                     /locus_tag="VFD73_09535"
     CDS             698..>1041
                     /locus_tag="VFD73_09535"
                     /inference="COORDINATES: protein motif:HMM:NF014080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI74249.1"
                     /translation="MSSSDTERADHLRVLGLSDDEIKVYQHLLRTGPSSVTELDDGVP
                     DRSAAIDTILGGLVQAGLARRSGSDHSRFLPVPPDAGLEAMTLRRESELKQARIEVLN
                     AYDEFRRTVHNES"
BASE COUNT          201 a          339 c          345 g          156 t
ORIGIN      
        1 aacgccttcc agcgcatgaa aaccacgccg ttcccgatgc tcgtcaggag cggtggcgaa
       61 caccagtgaa caagatcaaa ttctggtcaa ttcgctggtt ggacgcccgt ggcggccggg
      121 aagttggctc cgggcgtgac agaacggtct taccggtggg gtcccagggg tgctgtgtgg
      181 ctggggcgag ccgcgcggtg gacgctgtgt ccccgctccc ccgtggacag cctcactatc
      241 cacggagcac cgctcagcac cacctgggac ctcgcaccgg caggcgcaat gaccagggcg
      301 gcggtcatcg caccagaggc cgcacaggaa ggtgatgctg atcgcatgga actccctttc
      361 tcatcggcct cacgatgggg atgcacagtt tgtaccccct ccagcacagc cggtgatggc
      421 acgggagtgc gagggcaccg atacgccggg atcgagaccc aaccgaaacg ggctccgctg
      481 acggaacagc gaacaaccgc cagaattgga acagcagccc ggcggcgctc aggtggtccg
      541 tcgccgggct gctggacctc aattctcgct cacgactgcg cggaaatggt ggccggatgg
      601 tgacacggca caagaatgct gacaggacaa caattatcgc tggctgcatt caacaggaca
      661 cggacagtgc ggatcgcact ggaagggagg acgggtcgtg agcagctcgg acacggagcg
      721 ggccgatcat ttgcgcgtgc tcggactcag cgacgacgag atcaaggtct accagcacct
      781 gctgcggacc ggtccctcgt cggtcaccga gctggacgac ggcgtccccg accgctcggc
      841 agcgatcgac accatcctcg gcgggctggt ccaggcgggc ctcgcgcgcc gctccggctc
      901 cgaccactcg cggttcctgc cggtgcctcc ggacgccggc ctggaggcga tgacactgcg
      961 ccgggagtcc gagctcaagc aggcccggat cgaggtcctg aacgcgtacg acgagttccg
     1021 ccgtaccgtg cacaacgaat c
//
LOCUS       DASRPQ010000836         1030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3863788, whole genome shotgun sequence.
ACCESSION   DASRPQ010000836 DASRPQ010000000
VERSION     DASRPQ010000836.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1030
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3863788"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(165..257)
                     /locus_tag="VFD73_09540"
     tRNA            complement(165..257)
                     /locus_tag="VFD73_09540"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(221..223),aa:Arg,seq:gcg)
     gene            complement(298..>1030)
                     /locus_tag="VFD73_09545"
     CDS             complement(298..>1030)
                     /locus_tag="VFD73_09545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74250.1"
                     /translation="AFGLGEAIKRARELYAQDGKAPVLSEAAVKAWGYSTLNGASLRV
                     LGALRQYGLLEDPAPKTVRLSPRALTIILEEDGSPDRAMAIREAALAPPVFSELLEHY
                     GGSVPSEGTAVSHLVRNDHFNEDAARSLIAAWRDTLDLVQVVSATDITSRNDGHGVGG
                     RPDLRADDQRQPTQPRLQTEGERMEFTWPLSGNAVATMTVTRELEPDDIETLAAYFEI
                     AKKALSKAARPKPLEGGDTEAAKNA"
BASE COUNT          188 a          334 c          300 g          208 t
ORIGIN      
        1 gctttccgcg tcgtgcggga agccacccgg gagccctcgc ccccactcga taaatcgccg
       61 gagaggcgag atgaggacgc aaggcccgag taaagtcacg gccttgtgaa aaaaggtact
      121 tgcaatcatg gagcccggcc actacttttc taatgcccgg ggcacggcgt gggagggatt
      181 cgaacccccg ggacggtgtt tgcgcaccgt cggcccgatt cgcagtcggg taccttaagc
      241 ctctcagcca ccacgccaga tgtaccttga ccggctcggg tgttcgtccc gagccggtca
      301 agcattctta gccgcctcag tgtctccgcc ctccagtggc ttaggtcggg cagctttgct
      361 aagtgctttc ttagcaatct cgaagtaggc cgccagggtc tcaatatcgt ccggttcgag
      421 ttctctggtg accgtcatcg tggcaactgc atttccggac agcggccaag taaactccat
      481 gcgttccccc tcggtctgta gacgaggctg agtgggctgt ctctgatcgt cagccctcag
      541 gtcaggtcgg ccgcctacgc cgtgcccatc gttccgagag gtaatatcgg tagctgacac
      601 cacctggaca aggtccaggg tatcgcgcca agcggcgatt aggctcctgg ccgcgtcctc
      661 gttaaaatgg tcgttccgca ccaaatggga taccgccgtc ccctctgatg ggacagaccc
      721 cccgtagtgc tccaatagct cagaaaaaac cgggggcgct aaagccgctt cccttatagc
      781 cattgcccgg tcgggcgatc cgtcctcctc aagaatgatt gtcagtgccc gcggggagag
      841 ccgcacggtc ttcggcgcag ggtcttccag cagcccatac tgccgcaggg cgcccaggac
      901 ccgcagggat gctccgttaa gggtggagta gccccaggcc tttactgccg cttctgagag
      961 cactggggcc ttgccatcct gcgcatacag ctctcgcgct cgcttgatgg cctcccccag
     1021 tccaaaggcc
//
LOCUS       DASRPQ010000837         1770 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2919290, whole genome shotgun sequence.
ACCESSION   DASRPQ010000837 DASRPQ010000000
VERSION     DASRPQ010000837.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2919290"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..981
                     /locus_tag="VFD73_09550"
     CDS             <1..981
                     /locus_tag="VFD73_09550"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HZI74251.1"
                     /translation="PVLRALGRELVSGGRERVVVFLGDNAYPRGLPPSGDPTRPEEER
                     RLSAQVRAVTEAKATGYLVLGNHDWARFGKDGWNAARRQETFVDSIGEGRVVLLPRGG
                     CPGPSTVDIADRVRLILLDTQWWLHQGPKPEDPTSSCPADADDEIVDSIQSAIHGAQE
                     RLVVVVGHHPLATGGNHGGYFGWKDHLFPLLQAVPGLWLPLPLIGSLYPTARQNGISP
                     QDVPSRAYQHFIRVLSRAFAGRAPALYASGHDHNLQVIAGGVVPLQLVSGAGIYGHWG
                     RATRIRGSLFAKQASGFGRLDISRSGRARLAVIEVDQAGSSREVFSIWVE"
     gene            988..>1770
                     /locus_tag="VFD73_09555"
     CDS             988..>1770
                     /locus_tag="VFD73_09555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74252.1"
                     /translation="MTSTRALGLCLGLAITSSQLEAQSRIGGRDTVEAAGPRYRASGL
                     HSLLLGREYRSLWYTPVTVPVLDLERFAGGLQPVSKGGGQQTKSLLLLGRDGREFFFR
                     SVDKDPSATLPPELRGTVAGSVVRDQTSSAFPTAPLVVDRLLTAAGIPHSPERLVVLP
                     PDQRLGEFEPVFGGLMGFLDDRIGGSKEAAAHWGGAREIIGSDSLLARTTRSPEDRVN
                     ARAFLTARLFDVFIGDWDRHADQWVWARFSNSSPRLWSPIPRD"
BASE COUNT          288 a          580 c          573 g          329 t
ORIGIN      
        1 ccggtgcttc gcgcgctcgg gcgagagttg gtatccggcg gcagagaacg cgtggtcgtg
       61 ttcctgggcg acaacgccta cccccgtggg ctgccgccat cgggcgatcc aacgcgaccg
      121 gaagaggaac gacggctcag cgcccaggtg cgcgcagtta ccgaggcaaa ggctaccgga
      181 tacctggtgc tcggcaacca tgactgggcg cggttcggaa aagacggctg gaatgcggcc
      241 cgcaggcagg aaacgttcgt cgactcgata ggggaaggtc gagtggttct cctgccccgc
      301 ggcggttgcc ctggccccag caccgtggat attgcggatc gcgttcggct catcctgctc
      361 gacacgcagt ggtggctgca tcagggaccg aaaccggagg acccgacctc cagctgccca
      421 gcagacgccg atgatgaaat cgtggactcg attcagtccg ctattcacgg agctcaggag
      481 cggctcgttg tcgtcgtcgg gcatcatccg ctggcgaccg gcggcaatca cgggggctac
      541 ttcggatgga aagatcatct atttccactg ctgcaggccg tgcccggcct ctggcttccg
      601 ctgccgctga tcggctcgct ctatccaacc gcgcggcaga acggtatctc ccctcaggac
      661 gtgccgtccc gtgcctacca acacttcatc cgagtgttga gccgggcgtt cgccgggcgg
      721 gcgccggcgc tctacgcatc tgggcacgac cacaatctcc aggtgatcgc cggtggagtt
      781 gtgccgctcc agctggtcag cggcgcaggg atctacggcc actggggacg agccacccga
      841 atacgcggga gcctcttcgc caagcaggcg agtggctttg gtcgcctcga tatctctcgg
      901 tcgggccggg caaggctcgc cgtcatcgag gtagatcaag ccggtagcag tcgtgaagtc
      961 ttctctatct gggtggagtg atcttccgtg acttcaactc gagcattggg cctgtgcctt
     1021 ggtcttgcga tcacgtcctc tcagctggag gcccagtccc ggattggcgg cagagacacg
     1081 gttgaagccg ctggaccgcg ataccgggcg tcgggcctcc acagcctctt gctgggtcga
     1141 gaatatcgct cgctctggta cacgccggtg accgttccgg tgctcgacct cgagcggttc
     1201 gccggcggtc tccaaccggt ttccaaagga ggcggacagc aaaccaagtc tctgcttctc
     1261 ctcggccgag acggccgcga gttcttcttc cggtcggtcg acaaggatcc atcggccacg
     1321 ttgccgcccg agcttcgagg cacagtggcc ggcagcgtgg tccgagacca gaccagctcc
     1381 gcctttccga ccgcgccact ggtggtggat cggttgctga ccgccgcggg gatccctcac
     1441 agtccggagc gcctggtcgt cctcccgcct gatcagcggc tgggagagtt tgagccggtc
     1501 ttcggcggtc tcatgggttt cctcgacgac cgcatcggcg gcagcaagga ggctgccgca
     1561 cattggggtg gtgcccgcga aatcatcggc agcgattccc tcctcgcccg caccacgcga
     1621 tcgcccgaag accgggtaaa cgctcgcgcc ttcctgaccg cccgcctctt cgatgtgttc
     1681 atcggagatt gggatcgcca cgcggaccag tgggtctggg ctcgcttcag caatagcagc
     1741 cccagactct ggagcccgat ccctcgagac
//
LOCUS       DASRPQ010000838         1366 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1666161, whole genome shotgun sequence.
ACCESSION   DASRPQ010000838 DASRPQ010000000
VERSION     DASRPQ010000838.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1366
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1666161"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..333
                     /locus_tag="VFD73_09560"
     CDS             <1..333
                     /locus_tag="VFD73_09560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74253.1"
                     /translation="LTEAAFWLHTAALEMEEFTSALTEAAFKPPGTVSRSAGTAFAWD
                     GAAPEVEDLVPRRPEPRRKVPGPRWRRPDPCAKRPVPPVAGRIRVQFGGSHIVSVRNR
                     SPTDRLRI"
     gene            complement(556..>1366)
                     /locus_tag="VFD73_09565"
     CDS             complement(556..>1366)
                     /locus_tag="VFD73_09565"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI74254.1"
                     /translation="ADPDHPVTLSTPARGNVAFEGVHFRYQRSPSLPWTLEDIDLRCG
                     PGEVLALVGPSGGGKTTLVSLLPRFWDVDKGRVLLDGVDVRNLRLADLRSAIGIVPQD
                     PALFSGTIRENIAYARPGASAPEVEAAARAAHAHEFVERLPQGYDTVVGERGVKLSGG
                     QRQRIAIARAILKDPSVLILDEATSNLDTESERLIEDALGKLLVGRTTLIIAHRLSTV
                     RRADRLVVLDHGRIVEEGTHSALLALGGLYARLYQRQFRDHEPLDLEIRAG"
BASE COUNT          244 a          459 c          417 g          246 t
ORIGIN      
        1 ctgaccgagg ccgcattttg gctgcacaca gccgcactcg agatggaaga gttcacctcg
       61 gcgctgaccg aagccgcatt caaaccgcca ggaaccgtat cgagatcggc aggaaccgca
      121 tttgcttggg atggagcggc accggaagtg gaagacctcg ttccgcgccg gccggagccg
      181 cgtcggaaag ttccgggccc gcgttggagg cggccagatc cgtgcgctaa acgaccggtt
      241 ccgcccgttg ccggccggat ccgcgttcag tttggcggga gccacatcgt cagtgtccgg
      301 aaccgctcac caactgatcg gctccgcatc tgagcgatcc ggttccacct ccgacctggc
      361 cgcttccatc ttggatttgg ccacttccat gttggatctg gccgcgctta cctgaatcca
      421 ttccgcttcc acctgcccgg cagcccgttt cacactttcg gggccggaat cgctctcgaa
      481 cggtcagtac gcgttcgcca ggagccgaag cggctccagc tcggcacaga acgatcgtgc
      541 attgatttct ggttgtcagc cggcgcggat ctccagatcc aatggctcgt gatcccggaa
      601 ctgccgctgg tagagccgcg catagagccc acccagtgcc agcagcgccg agtgagtgcc
      661 ctcctccaca attcggccat gatccagcac caccagccgg tcggcccggc gaacggtgct
      721 caaccggtgg gcaatgatca gcgtggtccg gccgaccagc agtttcccga gagcatcctc
      781 gatcaagcgc tcgctctcgg tgtccaggtt gctggtggct tcatccaaaa tcaggaccga
      841 gggatccttg agaatggctc gcgcgatggc gatccgctgc cgctgtccac ccgagagctt
      901 cactccacgt tcgccgacga cggtgtcgta accctggggc agccgctcca cgaactcgtg
      961 cgcgtgcgcg gcgcgggctg cagcttccac ctccggagcc gaagcgccgg gccgggcata
     1021 ggcgatattc tcccggatgg tgccgctgaa cagcgccgga tcctgaggaa cgatgccgat
     1081 ggcgctcctg agatccgcca atctgagatt tcggacatcc accccgtcca gcaagactct
     1141 gcctttgtcg acatcccaaa agcggggaag cagcgacacc agggttgtct tgcctccacc
     1201 cgagggccct accagcgcca gcacttcgcc tggaccacac cggaggtcga tgtcttccag
     1261 ggtccagggc agtgaggggc ttcgctggta gcgaaagtgc acgccctcga acgcaacgtt
     1321 gcctcgcgcc ggcgtgctaa gagtgaccgg atggtcgggg tctgcg
//
LOCUS       DASRPQ010000839         1226 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3864032, whole genome shotgun sequence.
ACCESSION   DASRPQ010000839 DASRPQ010000000
VERSION     DASRPQ010000839.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1226
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3864032"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..482)
                     /locus_tag="VFD73_09570"
     CDS             complement(<1..482)
                     /locus_tag="VFD73_09570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HZI74255.1"
                     /translation="MERRAFIAATIGLVATPLAAGAQTPGKTYRIGYLTVPDRESAHG
                     VADTFERALRDLGWNGKNVVVEYRFANSDTKRLASFAFELVESRPDVIVAGANAAVLA
                     LKDATRTIPIVMFLAADPVRSGLVASYARPGGNVTGLTVTTGSELYGKQLQLLKSAFP
                     "
     gene            complement(482..>1226)
                     /locus_tag="VFD73_09575"
     CDS             complement(482..>1226)
                     /locus_tag="VFD73_09575"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZI74256.1"
                     /translation="PALVGELLRQNIDVLFATSAYAIRAAKQASTSVPIVGVDLETDP
                     VDAGWVKSLARPGGNVTGFFLDMPELGGKLLEFLREALPRIQRVAVLWDAQLAEAQFK
                     ATESAAQARRFGLQSLAFRKPQEFAAAFEAARRQKAQALVLLSSPAVFLHLKRLGDFA
                     LQYRLPAISVFPQFANVGGLMGYGPDLGDLFRRAANYVDRILKGTSPADLPIQRPAVF
                     ELAVNLKTAETLRLTIPPSVLSRADKVLK"
BASE COUNT          231 a          398 c          389 g          208 t
ORIGIN      
        1 ttcgggaagg cgctcttgag cagctgcagt tgcttgccat aaagctcgga gccggtggta
       61 acggtgagtc cggtgacatt cccgcccggc cgcgcgtagc tggccaccag gccggaccgc
      121 acgggatcgg ccgcaaggaa catgacgatc gggatggtac gggtcgcgtc cttgagggct
      181 aacaccgccg cattggcgcc cgcgacgatg acatccggcc tcgactctac gagctcaaac
      241 gcaaagctcg ctaaacgctt cgtatcacta ttcgcgaagc gatactcgac caccacgttc
      301 ttgccattcc agccgaggtc gcgcagcgcc cgctcgaatg tgtcggcgac gccatgggcc
      361 gactcgcgat caggcaccgt gagatagccg atgcggtacg tcttccccgg tgtctgcgcc
      421 ccggcggcga gcggcgtggc gacgaggccg atggtagcgg caatgaatgc ccgtctctcc
      481 atcacttgag gactttgtcg gctcgtgaca ggactgaggg cgggatcgtg agccggagcg
      541 tctccgcggt cttcaggttg acggctagct cgaacaccgc cggccgctgg atcggcaggt
      601 ctgcggggct cgtccccttc agtatccggt ccacgtagtt agctgcccga cggaacaggt
      661 caccgaggtc cggcccgtaa cccatcaggc cccccacatt ggcgaactgg gggaaaacgc
      721 tgatggcggg cagacgatac tggagcgcga aatcaccgag acgcttcagg tgcaggaaca
      781 ccgccggaga tgacaacagg accagggcct gggccttttg ccgccgcgct gcttcgaagg
      841 ccgcggcgaa ctcctgcggt ttacgaaacg caagtgactg gagcccgaac ctgcgggcct
      901 gagccgcgct ctcggtcgcc ttgaattgag cttcagcgag ttgggcatcc cagaggacag
      961 caacccgctg gattcgcggg agcgcctcgc gcaggaactc gagcagcttc ccacccagct
     1021 cgggcatgtc gaggaagaag cccgtcacat taccacccgg ccttgccaga ctcttgaccc
     1081 acccggcgtc caccgggtcg gtctcaagat cgacccccac gatgggcaca ctggtactgg
     1141 cctgtttcgc ggctcgtatg gcataggcgc tggtggcaaa caacacatcg atgttctgcc
     1201 gcagtaactc gccgacaagc gccggt
//
LOCUS       DASRPQ010000840         1072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1666563, whole genome shotgun sequence.
ACCESSION   DASRPQ010000840 DASRPQ010000000
VERSION     DASRPQ010000840.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1666563"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..961)
                     /locus_tag="VFD73_09580"
     CDS             complement(<1..961)
                     /locus_tag="VFD73_09580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74257.1"
                     /translation="MSAVRILRIAAGGDGVGKQSDGKTIFIPRTAPGDLVEATEVRSH
                     QRFSRGRLLQILEPSAHRVEPRCPHYVRDNCGGCQLQHLDTETQLASRQTFVGDALRR
                     LAKRELPDPPIVPAEKPYDYRTKLTLHARSGGRRIGLHPYYSAEEIFDLEWCHITVPE
                     LMKLWQVIRSLRSLLPATVEQLVLRLDRRGNRHLLVRVGEGEAWSGGPRLAREVQRRG
                     ESLFSWYQPPDGAARVVSGGPEAFPATVFEQVHPEMGDRVRQFAIDRLGPVGGKKVWD
                     LYAGIGETTAQLAALGAEVESVEVDRRAVAEAEARGPRARRHTG"
BASE COUNT          188 a          372 c          332 g          180 t
ORIGIN      
        1 gaccggtgtg tcgacgggca cgcggcccgc gggcttcggc ctcggccacc gctcggcgat
       61 ccacttccac gctctccacc tctgcaccca aagcggcgag ctgtgctgtg gtctcgccga
      121 tgccggcgta cagatcccaa accttcttgc ctcctaccgg ccccaatcta tcgatggcga
      181 attgccgcac ccggtcgccc atctccggat ggacctgctc gaatacagtc gccggaaacg
      241 cttccgggcc tccggacacc acccgggccg ccccgtccgg tggttgatac catgagaaga
      301 gcgattcgcc gcggcgttgc acctcccgcg cgagccgagg cccgccggac caggcctcgc
      361 cctcgccgac tcggaccagc agatgccgat tccctcggcg atccaatcgc agcacgagct
      421 gctcaaccgt agcgggcagc aacgagcgga ggcttcggat cacctgccag agcttcatca
      481 actccggcac ggtgatatgg caccactcga ggtcgaagat ctcctccgcg ctgtagtacg
      541 ggtgaagacc gatgcgccgg ccgccgctgc gggcgtggag agtgagcttg gtgcggtagt
      601 catagggctt ctccgccgga acgataggcg gatcgggaag ctcacgtttg gcgagacgcc
      661 gaagcgcgtc gcctacgaac gtttgccggc tcgccaactg ggtctcggta tccaggtgct
      721 gcagctgaca gccaccgcaa ttatcgcgta cgtagtgcgg acagcgaggc tcaacccggt
      781 gggcagaagg ttccaggatc tggaggagac gaccccggct gaaccgctgg tgagacctga
      841 cttcggtggc ttcgacgaga tctccgggag cagtcctcgg aataaagatg gttttcccgt
      901 ccgactgctt tccaaccccg tcgccaccag cggcgatacg aagaatgcgg acagcgctca
      961 ccggagcgct tcagtccgcg ccagccggct ccagttgtcg ctctgagcgg cgtcagtcgt
     1021 cagcaccggc cggcgactct gccgagcttc atcctccgcc agcgcagcag cg
//
LOCUS       DASRPQ010000841         1267 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3864237, whole genome shotgun sequence.
ACCESSION   DASRPQ010000841 DASRPQ010000000
VERSION     DASRPQ010000841.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1267
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3864237"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(474..553)
                     /locus_tag="VFD73_09585"
     tRNA            complement(474..553)
                     /locus_tag="VFD73_09585"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(518..520),aa:Tyr,seq:gta)
BASE COUNT          255 a          395 c          387 g          230 t
ORIGIN      
        1 cctttccgca taagcgttca tgcggggaac ctgggagctg cttccggtgg atatccaatc
       61 cgcctacgac gggcatcggg acctcctcaa gctccggagg gggcatgagc ccccgcgaat
      121 gcctacgcgg tcaatcgtga cgcgtctgag ctggggaggt ctcgcctgcg caaggcatcg
      181 gcctcagctc agcccggccc gatgcatgtc atctatacgt ccgtaacttc cccgcccggc
      241 ccgccgacgg cccgcagagc acgccgacag caaacaggca cagcaacccg ggcggtagtc
      301 atttaccctg ctcacaagcc atattagaac tatatgcgaa cagcaacggg ctgcctgatc
      361 tggcccacgg ctggcccaaa gaccttcacc aacggtccgc gaaccgctcg caacggcacg
      421 caaaagccgg tgccatcatc cgatgtcacc ggctctgacc tgcgagaaca gtgcggcagg
      481 tgtgggttcg aaccaacgta ggctgagccg acggttttac ggaccgctcc ttttggccac
      541 tcgggcaacc tgcttgaagc cgtcagcaac aggcagcgct tccggtggga ctcgaggacg
      601 gcacctctgg ccggacggcg ctgaggcagc tcatagcctc gttaaggcga gtgcttactt
      661 gaggccgccg cgtcaagcct gaaccggcac cgcggccggg cggagcggcg gtattgcccg
      721 ccgactaatg gcccggtaca cggcaattgg tctagacctg ttaacatatt ggtatagacc
      781 aaatcggtgc aggtatcagc accgattcag cacggggtcc ggaaacgacg ggaaataacc
      841 ggtacgattc ggacaaacag cccaggtggc gaggttcccc cgctcgccgg cgggatggcc
      901 cgctattgat cagaagctcg ggaaaacccc agctcagcgg cctggcatta gcccttgagc
      961 agctgccggg ccatcaccat ccgctggatc tggttggtgc cctcgtagat ctgggtgttg
     1021 tcggacgtga gcgaagctga gctggccgta cgccgatgat catgcgcttg acctggacgt
     1081 gggcgatggt tgctgatggc cagtttccgt tattttctcg gttctcacgg aacagacacg
     1141 gaacatcacg gcggcctggt gctcgctgtc gctgaacttc gctgattgct cgatcgggca
     1201 cactcacggc tccggagagc actgatagct cgagttgtaa ccagcggaaa cgggcaaagt
     1261 agtcacg
//
LOCUS       DASRPQ010000842         1240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1352784, whole genome shotgun sequence.
ACCESSION   DASRPQ010000842 DASRPQ010000000
VERSION     DASRPQ010000842.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1352784"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VFD73_09590"
     CDS             complement(<1..262)
                     /locus_tag="VFD73_09590"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI74258.1"
                     /translation="MKTDSHSIARPPVISSLELICAAQFVLQLDFSIVNVALPTIQRE
                     LGFAPADLQWVVTGYALTFGSLLLLGGRAGDLLGRRRLLMLGL"
     gene            complement(387..1217)
                     /locus_tag="VFD73_09595"
                     /pseudo
     CDS             complement(387..1217)
                     /locus_tag="VFD73_09595"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
BASE COUNT          225 a          406 c          396 g          213 t
ORIGIN      
        1 agagccccag cataagtaag cgccgccgcc ccagcaggtc gccggcacgc ccccccaaca
       61 ggagcaagga cccaaacgtg agggcatagc cggtcaccac ccattgcaag tcggcggggg
      121 cgaagcccaa ttcgcgctgg atggtcggca gcgcgacatt gacgatgctg aagtctaact
      181 ggagtacaaa ctgcgcggcg catatcaact ccagcgaact gatcactgga ggacgggcaa
      241 tggagtggga atccgtcttc atcgtttctc tccttttcct cactccaggg cctacccggt
      301 cctctcttcc agtttcaagc gatcctcagg acgaccttgc cgcgcacgtg tccatgttcc
      361 acctgctcca gggcctcgac ggcctgttcg agtggataga tgtggtcgat gatcaccttg
      421 agttgcccgg catcgacgaa gcgcgtaatg cgccccagca gttcagcgct cggctgccag
      481 gagaggaggg ctgcgttgat gccctgctcg gccaacctgg gcgcctcagc agtcacgatg
      541 gtcgtgagga gcctgccacc tgcccgtagg acctggctga tgtgctcaaa gcccgccgga
      601 tctctggtgg ccacatccag cacggcatcg actcctcctg gagagagcgt gtggacggcg
      661 ctgaccaggt cgccctgggt gtagtcgagt gcctgcgccg cgcccaagct ggtgacgtag
      721 ttcgcaacct ctgggcgcgc ggtcgccagc acgcgggcgc cgcgctggac cgccatctgg
      781 atggcgtagg tgccgatgcc accggtggct cccacgatca tgagggtctc accggaaccg
      841 atctccaacg cgtccagact ggcgagcgcg acctgcgccg gcatgggtaa agcggcagcc
      901 tgcacgtaat cgagcgagac gggtttgggg gccaccgccc cggaggcgga ggtgaccaca
      961 tagtcagcat aagtgcccca gtggtgcacg cgctgtggca tgaactggcc gaagacgtca
     1021 tcgccgggtc ggaaagtgct tacgcctgga ccggcctgct cgacgacacc ggcgccatcg
     1081 aagcccagca ccactgggaa ttcgggcggc caaaactgct ggtacgcgcc gtcgcgggcc
     1141 cacttgtcca tggggttgac gccggccgcg tgtagccgga tcaagatctc cccctcgccc
     1201 ggctgcggcc tgggcaactc ctgtaaatgt ggttgcgtct
//
LOCUS       DASRPQ010000843         1045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2293737, whole genome shotgun sequence.
ACCESSION   DASRPQ010000843 DASRPQ010000000
VERSION     DASRPQ010000843.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2293737"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            3..125
                     /locus_tag="VFD73_09600"
     CDS             3..125
                     /locus_tag="VFD73_09600"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZI74259.1"
                     /translation="MGNPDDVAAAVAWLASDDASYVTGTTLFVDGGLMVNAGGL"
     gene            complement(214..789)
                     /locus_tag="VFD73_09605"
     CDS             complement(214..789)
                     /locus_tag="VFD73_09605"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HZI74260.1"
                     /translation="MTTIRPAWGEVFRVPPSTSADDLLRLPDDGYRYELYEGVVVREM
                     TSPGHADICQRLGVELGIYARSTGYPHRILQNALFDLTLPGASSRTVLAPDISIMRGN
                     AVPTWTSVPHETPLLAIEVVSQSQTLAELALKAQTYITAGVEEVWVVDHQTRVVEVWT
                     AQDTTTLGDTQTLTSPLLPGFAVAVRFLLDG"
BASE COUNT          194 a          314 c          358 g          179 t
ORIGIN      
        1 gcattggcaa tcccgacgac gtggcagcgg cggtggcgtg gctggcctct gatgacgcca
       61 gctatgtgac agggacgacg ctgttcgtag atggcgggct gatggtgaac gcgggcgggc
      121 tgtaggagtc ctcacccccc ggctccctct cctcgcaagg agagggggag gcggagcgcg
      181 ataccactgg ccagggggag agacgagcgg acgctagccg tcgagcagga agcgcaccgc
      241 gacggcgaag ccgggcagca gcgggctggt gagcgtctgc gtatcgccga gcgtcgttgt
      301 gtcctgtgcc gtccagactt ccaccacgcg cgtctggtga tccaccaccc agacctcctc
      361 gacgccggcg gtgatgtagg tctgggcttt gagcgccagc tcggccagcg tctgcgactg
      421 cgagacgacc tcgatggcga gcaggggtgt ctcatgcggt acgctcgtcc atgtaggcac
      481 cgcgttccct cgcatgatcg agatgtcggg cgccaatacc gtacgtgagc tggctccggg
      541 caaggtcagg tcaaacagcg cgttctggag gatacggtgg gggtatcctg tggagcgcgc
      601 gtagatgccc agttccacac ccaaccgctg gcagatatcc gcatgtcctg gtgaggtcat
      661 ctcgcgcacc accacccctt cgtacaactc atagcgatag ccgtcgtcgg gcaggcgcaa
      721 cagatcatca gcgctggtgg acggtggcac gcggaatacc tcaccccagg cgggccggat
      781 ggtggtcata ggggaacctc tcgcttctcg tcgtcacgaa cattgatggc agaatagcat
      841 atatatggca tactggtgtg gagcacgctc gctgaggtcg caccggagca tcagccggcg
      901 acgaacgggt aaagaggcgc ccatatgcca ggagattcca tcgccagcgg cacatccgac
      961 tctgtcaggg cccaggaggc gggcgcagcg gatgcggtcg cgaatctcgt acagcagctc
     1021 gacgttgcct atctggtcga gacgc
//
LOCUS       DASRPQ010000844         1070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_729425, whole genome shotgun sequence.
ACCESSION   DASRPQ010000844 DASRPQ010000000
VERSION     DASRPQ010000844.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_729425"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..241
                     /locus_tag="VFD73_09610"
     CDS             <1..241
                     /locus_tag="VFD73_09610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74261.1"
                     /translation="HDVTDPMAITGLWIAAHAYPASDPAEVAKAMQLLGLRYPEYASL
                     PMPKPDEIRVFRVEPNVISVLDYSKGFGHADLVTV"
     gene            517..>1070
                     /locus_tag="VFD73_09615"
     CDS             517..>1070
                     /locus_tag="VFD73_09615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015934064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI74262.1"
                     /translation="MRDKAQARAEVSFSIIAIQEAGLDGFWVHRVLERAGIESHVVDA
                     ASILTSRRWRRAKTDRIDGEALLRTLLAYKRGEPRVCAMVRVPSPEEEDRRRLCRERR
                     TLVAERVAHVNRIKGLLFAQGIADYEPLHGNRRQRLEALRTGDGRPLPLYLKAQIGRE
                     LDRLELLLEQLKAVEAERNAVLEPT"
BASE COUNT          196 a          317 c          361 g          196 t
ORIGIN      
        1 ccacgatgtc acggacccga tggcgattac cgggctctgg atagccgctc acgcctatcc
       61 ggcctccgat cccgccgagg tcgccaaagc gatgcagcta ctcggcctac gataccccga
      121 atatgcaagc cttccgatgc cgaaaccgga cgaaatccgg gtattccggg tcgagccaaa
      181 cgtgatctcg gtgctcgatt actcgaaagg cttcggtcat gccgacctcg tgaccgtgtg
      241 actgcggtaa taagagatcc tatgggccgg tggagagcgg tagacgcagc gtaaggtgcg
      301 gccgctagcc aatcttggga ggcgatgatg cctgcatctg gacctcggcc tggtcaggtt
      361 gccgtacaag tcagccttgc ggcgatcttt gtatctctgg agttatcccg ttcgacctgg
      421 ttgatcacct cgctcattcc aggcggcgca gacaagatgt ccaagcattc ggtgcgtagc
      481 ggcgatatta cggagctgat gacccacctt gccaagctgc gggacaaggc gcaggcccgg
      541 gcggaggtga gcttttcgat tatcgccatt caggaagccg gcctggacgg gttctgggtt
      601 catcgcgtgc tggagcgggc gggcattgag agccacgtcg tcgatgccgc ctcgatcctg
      661 acctcgcggc ggtggcgcag ggcgaagacg gaccgcattg atggcgaggc gctgctgcga
      721 acgcttttag cgtacaagcg tggtgaaccc cgcgtttgcg ccatggtccg ggtaccgagc
      781 ccggaggagg aggaccggcg ccggctctgc cgcgagcgca ggacgctggt ggcggagcgg
      841 gtggcgcacg ttaaccggat caagggtctg ttgttcgccc agggcatcgc cgattacgag
      901 cccctgcacg gtaatcggcg ccagcggctg gaagcgctga ggaccggtga cggacggccc
      961 ttgcccctgt acctgaaagc gcagatcggc cgcgaactcg accggctgga gttgctgctg
     1021 gagcagctca aagccgtgga agcggagcgc aatgctgtgc tcgagcccac
//
LOCUS       DASRPQ010000845         1717 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3545869, whole genome shotgun sequence.
ACCESSION   DASRPQ010000845 DASRPQ010000000
VERSION     DASRPQ010000845.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1717
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3545869"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            44..721
                     /locus_tag="VFD73_09620"
     CDS             44..721
                     /locus_tag="VFD73_09620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74263.1"
                     /translation="MRAPRQRTFAGMALVIVSASVLTQAQAQVRGIPVYNSGIASGIA
                     VYGDVAFPNADAGKGKAYAISGRAGFGPFGATAILSSFNPEGPASSITSVGATLNYKL
                     FGGPLIPLSVTLQGGIGYAKPDVGFVPGKETELRFPIGMGFALTIPNPALAIKPWIAP
                     RVDIVRLSNGGVSNTDTNFGLSGGLEFNLLNGFGLHAAYDRVFTDGGDPSVFGVGAHY
                     TFRIPGL"
     gene            775..1095
                     /locus_tag="VFD73_09625"
     CDS             775..1095
                     /locus_tag="VFD73_09625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74264.1"
                     /translation="MFSTACAQTFDSTTLGVPVTMATAAGQAAEGSRFQVTSHAVFAL
                     WGLARLKEPSLRKALAAQLVGGSGVSDLRIRVRSRWSDILVTALTGGLLVPRSVTFEG
                     VVRK"
     gene            complement(1037..>1717)
                     /locus_tag="VFD73_09630"
     CDS             complement(1037..>1717)
                     /locus_tag="VFD73_09630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74265.1"
                     /translation="LGSVRRDDPRFRFGRAAPTLVAGSTWPRDERVLLRAFVLVRRTL
                     PNARLILVPHEPTPDHLARVERQVAVLDLPPPVRLSAAQAPAPLLLVDTVGQLATLYG
                     AGTMAYVGGGFGRAGLHSVLEPAAWGIPVAFGPRWRNSRDACLLLTAKAAVSLPADPT
                     AAERALAQEWERWIREPEVRQAEGRRAREVIDQGVGASERSAAMLTEIISAPRPRRSP
                     TEVRAAPQ"
BASE COUNT          294 a          562 c          564 g          297 t
ORIGIN      
        1 gcgccaagtg ccgctaaggc cgaggacttg caccggacga atcatgagag caccgagaca
       61 gagaacgttc gcggggatgg cgctggtgat cgtcagtgcc tcggttctaa cccaggccca
      121 ggcccaggtg cgcgggatcc cggtctacaa tagcggtatt gccagcggca tcgcggtgta
      181 cggcgacgtc gcatttccca acgccgatgc cggcaaagga aaggcgtacg ccataagcgg
      241 acgagcgggc ttcggtccct ttggcgccac cgccatcctt tccagcttca atcccgaggg
      301 cccggcctcg agcatcacct cagtcggggc aacgctcaat tacaagcttt tcggtggacc
      361 gctcatcccg ctctccgtca cgctccaggg cggaatcgga tatgccaagc cggacgtggg
      421 ctttgttcca gggaaggaga cggagctcag atttcccatc gggatgggct tcgctctgac
      481 cattccgaac ccggcgcttg ccatcaagcc ctggattgcg ccccgagtcg acattgtacg
      541 actctccaac ggcggcgtgt cgaataccga caccaacttt ggtctgagcg gagggttgga
      601 gttcaacctg ctgaatggct tcggcctcca cgccgcctac gatagagtgt tcaccgacgg
      661 gggagacccg agcgtattcg gggtgggcgc gcattacaca ttccggatac cggggctgtg
      721 agcgcagggc gttttccggc aagcagctcc tctcttctct gcgcggcgct tctggtgttc
      781 tcgaccgctt gtgcacagac cttcgactcc accacgcttg gcgtgccggt cacgatggcc
      841 accgcggcgg gacaagccgc ggaaggcagc cgtttccagg tgacgtccca tgccgtcttt
      901 gcactttggg gtctggcgcg gctgaaggag ccgtcgctcc ggaaggcgct cgcggcgcag
      961 ctcgtcggcg gaagcggcgt ctccgatctc agaatccggg tccgaagccg ctggagcgac
     1021 atcctggtga ccgcgcttac tggggggctg ctcgtacctc ggtcggtgac cttcgagggc
     1081 gtggtgcgga aataatctcg gtcagcatgg ccgcgcttcg ttccgatgcg cccactccct
     1141 ggtcaatcac ttcgcgggca cgccgtccct ccgcctgccg aacctccggc tccctgatcc
     1201 agcgctccca ctcttgcgca agcgcgcgct ccgccgctgt cggatcggcg ggcagcgaaa
     1261 ccgccgcttt ggcggtgagc agcaggcaag cgtcccggct gttgcgccag cggggcccaa
     1321 acgccaccgg aatgccccag gcggcgggct cgagtacgga gtgcagacct gcccgaccaa
     1381 agccgccacc gacgtacgcc atggttcctg ctccgtagag cgtggcgagc tgtcctacgg
     1441 tatcgaccag gagcagcggt gccggagctt gtgcagcgct gaggcgaaca ggagggggta
     1501 ggtccagcac tgcaacctgc cgttctactc gcgccagatg gtcgggtgtg ggctcgtggg
     1561 gcaccagaat cagccgagca ttcggcagcg tgcggcgtac cagaacaaag gcgcggagga
     1621 gcacgcgttc atcccgcggc caggtcgagc cggcgacgag tgtcggcgca gcgcggccga
     1681 atcgaaaccg gggatcgtca cgccgcaccg agcccag
//
LOCUS       DASRPQ010000846         2214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1353419, whole genome shotgun sequence.
ACCESSION   DASRPQ010000846 DASRPQ010000000
VERSION     DASRPQ010000846.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1353419"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..396
                     /locus_tag="VFD73_09635"
     CDS             <1..396
                     /locus_tag="VFD73_09635"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI74266.1"
                     /translation="PPPALPSGAHIVVADEKRALLDMMVQTLRSANHRVFQAYDGQAA
                     YELALALHTVDLLITNTEMPGLKGPELIRQLRTLMPALPILYIRNQGRGAGSSAGLPA
                     DVPTLSEPFTAEQLLAQVGSLLQRDGTST"
     gene            complement(372..2012)
                     /locus_tag="VFD73_09640"
     CDS             complement(372..2012)
                     /locus_tag="VFD73_09640"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI74267.1"
                     /translation="MSKPARKQSLGRAEEVSRLENGSPSTFLPDYSVAIVETVRQPLV
                     LLDAGLRVLVANAAFYRSFGVTAAETRRRSLFDIAHSRWDSPELHAVLARLQHRDIAF
                     ENHEVRVLIDGSARVYRLNARRLGASDQDSETILLAFDDVTEQLRVDERLRELARMEA
                     IGQLAGGVAHEINNQMTVLSGFLAFVTRGFSPDNPLRNDLRHAERAAEHVVYVTRQLL
                     NFSRKQMIKREIIDPWTMLQGMRTLLGRVIGEHILVDLIRKGEVRAVQFDPSQLAEVF
                     INLALNSRYAMGRTGTFEIALSPVQVDARTSDPDNGFSSQPPGRYVRFEVRDTGTGMD
                     EATSRRIFEPFFTTKPIGEGTGLGLASVLGAVTQNGGFIRVESEPGAGTTFIIELPEV
                     PRGAEGPGERVTSEELSSGSETIIVADEDEGVRTFIGRALGDLGYTVLQARDGEDVLR
                     LFSEHPSEVRLVLTELVMPRGDGREVGERMAARAPDVPVLYMSAYTESEVTRRRLLTT
                     VDAFLPKPFSPSLLAERVRAALDGTNHHPSGQVDVPSR"
BASE COUNT          379 a          724 c          706 g          405 t
ORIGIN      
        1 ccaccaccgg ccctccccag cggggcccat attgttgttg ccgacgaaaa gcgtgcattg
       61 ctcgacatga tggttcagac gctccggtcc gccaaccacc gtgtctttca ggcatacgat
      121 ggccaggccg cgtacgagct ggccctcgcc ctccacactg tcgacctatt gatcacgaac
      181 acggagatgc cgggactcaa ggggcccgag ctcatccgcc agctgcggac cctgatgccg
      241 gcgcttccca tcctttatat aaggaatcag gggagagggg cgggctcgtc cgccggcctt
      301 ccggccgatg ttcccacgtt gagcgagccg tttaccgccg agcagctgct ggcccaggtg
      361 ggaagtttgc ttcagcggga tggaacgtcc acttgaccag aggggtggtg gttggtgccg
      421 tcgagggcgg cgcgcacccg ctctgccagc agcgaaggtg agaatggctt cggcaggaag
      481 gcatcaactg tggtcaggag ccgccgccgc gtgacctcgc tctcggtata cgccgacatg
      541 tagagtactg gaacatccgg ggctcgggcc gccatccttt ccccgacttc tcgcccatcg
      601 ccccgaggca tcaccagctc ggtcagcacc aggcgcacct cgctgggatg ctcgctaaag
      661 agtcggagga cgtcttctcc atcccgagcc tgcaggacgg tgtagcccag atcgccgagc
      721 gcacggccga taaaggtgcg cacgccttcg tcttcgtccg ccacgatgat ggtctcactc
      781 ccgctggaca gctcctcgct cgtgaccctc tccccgggac cctcggcacc ccggggaact
      841 tcgggcagct cgatgatgaa ggtggtgccg gcgcccggct cgctttccac ccggatgaac
      901 ccaccgttct gggtcaccgc tcccagcaca ctcgccaggc cgaggccggt gccttcgccg
      961 atcggcttgg tggtgaaaaa cggctcgaat atccgtctgc tggtggcctc gtccatgccg
     1021 gtgccggtgt cgcgcacctc gaaccggacg tagcggccag gcggctggct ggagaatccg
     1081 ttgtcggggt cgctggtccg ggcgtcgacc tgcaccgggg agagggcaat ctcaaaagtg
     1141 ccggtgcgtc ccatggcata gcgggaattg agcgcgagat tgatgaatac ctcggccaac
     1201 tggctggggt cgaactgcac cgcgcggacc tcgcccttcc ggatcaggtc gaccaggatg
     1261 tgctctccga tcacccggcc gagcagcgtc cgcattccct ggagcatcgt ccaggggtcg
     1321 atgatctccc gtttgatcat ctgtttccgg ctgaagttga gcagctgtcg agtgacgtac
     1381 accacgtgct cggccgctcg ctctgcgtga cgcaggtcgt tccgtaacgg attgtcgggc
     1441 gagaagcccc gggtcacaaa tgccaggaac ccgctgagca ccgtcatctg attgttgatc
     1501 tcgtgagcca ctcccccggc cagttgcccg atcgcctcca tccgggccag ctctcgcagg
     1561 cgttcgtcca cccggagctg ttcggtcacg tcgtcgaagg caaggaggat ggtctcgctg
     1621 tcctggtccg atgcgccgag ccggcgggcg ttcagccggt agaccctggc ggagccatcg
     1681 atgagaaccc ggacctcatg gttctcgaag gcgatgtccc ggtgctgtag tcgtgccagg
     1741 acggcatgca gctccggaga atcccaccgg ctgtgggcga tgtcgaacag cgaacgacgc
     1801 cgggtctcgg ccgcggtcac cccgaagctt cgatagaaag ccgcattggc gacgagcacc
     1861 cggagaccgg cgtccaggag aaccaacggt tgccggactg tctccacgat ggccacgctg
     1921 tagtcgggca ggaaagtgga gggggatccg ttctcgagcc gagatacttc ctcggcacga
     1981 cctagtgatt gcttcctggc cggcttcgac acgtcggatc tcgtttcaag cgcgggacac
     2041 gatttctcat gagatgagtg actacctcag cccagactgg actgactgaa cggcatccag
     2101 agatgctggc acttcctaca gcgcgcctcg gggttggttc cggctcccgc acttgcaggc
     2161 cgcccggggg agccacagct cggacacgat ccgggatcat gcgggtgcca gggg
//
LOCUS       DASRPQ010000847         1006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1040174, whole genome shotgun sequence.
ACCESSION   DASRPQ010000847 DASRPQ010000000
VERSION     DASRPQ010000847.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1040174"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..662)
                     /locus_tag="VFD73_09645"
     CDS             complement(<1..662)
                     /locus_tag="VFD73_09645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74268.1"
                     /translation="MTTRTLEMALATPGVDAAGNPVRLPLGVAEDGGYREDLGAEHML
                     VNIGPQHPATHGVLRLVLELEGETVRRCIPHVGYLHSGFEKLGEYRHYNQIIPLTDRT
                     DYLSPMANNVCLALAVEKLMGLELTERCKVLRVIACEMSRIISHLVWLGTTGIDLGAF
                     TPFLWSFQERERIYNLQEAWTGARLTTSLTRVGGLMADIPEGWEAGLREFTRTFPTTL
                     AEV"
     gene            complement(659..>1006)
                     /locus_tag="VFD73_09650"
     CDS             complement(659..>1006)
                     /locus_tag="VFD73_09650"
                     /inference="COORDINATES: protein motif:HMM:NF012549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HZI74269.1"
                     /translation="ALDKRQALEVQSVYDLWRGADWLEREVYDMFGVTFVGHPDLRRI
                     LMWETYAEGYPLRKDFPLRGHFSRAEQTRQALAANPEAHYSLEELSIADAYGELPKEM
                     QDRLAKGERGFLK"
BASE COUNT          184 a          337 c          301 g          184 t
ORIGIN      
        1 acctcggcca gggttgtcgg aaaggtccgg gtgaattccc gtagacccgc ttcccaccct
       61 tccggaatgt cggccatcag accgcccacc cgggtgaggc tggtcgtcag ccgagcgccg
      121 gtccacgcct cctggagatt atagatccgc tcccgttcct ggaacgacca caaaaacggc
      181 gtaaacgcac cgagatcgat cccggtcgtg cccagccaca ccagatggga gatgatgcga
      241 ctcatttcgc acgctatcac ccgaagcact ttgcagcgct cggtgagctc gaggcccatc
      301 agcttctcga ccgcgagcgc caggcacacg ttgttcgcca tgggcgacag gtaatcggtc
      361 cggtcggtga gcggaatgat ctggttgtag tgccggtatt cgccgagctt ctcgaagccg
      421 gagtggagat agccaacgtg gggaatacaa cgccggacgg tttcgccttc cagctccagc
      481 accaggcgca gcacgccgtg cgtcgcgggg tgctgtggcc cgatattgac cagcatgtgc
      541 tcggcgccga ggtcttcgcg gtacccaccg tcctcggcca cccccagcgg gagccgcacc
      601 gggttgccgg cggcgtccac acccggagta gccagcgcca tctccagcgt tcgcgtcgtc
      661 atttcagaaa acctcgttca cctttggcca gccggtcctg catctctttg ggaagctcgc
      721 cataggcgtc cgcgatggag agctcctcca gcgagtagtg agcttccggg ttggctgcca
      781 gcgcctgccg agtctgctca gcgcggctga aatggccgcg cagcggaaag tccttccgca
      841 gaggatagcc ttcggcgtag gtctcccaca tcaggattcg gcgcaggtcc ggatgtccca
      901 caaacgtgac gccgaacatg tcgtagactt cacgctccag ccagtcagcg cctcgccaga
      961 gatcatagac cgactgaact tccagcgctt gccgcttgtc cagcgc
//
LOCUS       DASRPQ010000848         3293 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4498074, whole genome shotgun sequence.
ACCESSION   DASRPQ010000848 DASRPQ010000000
VERSION     DASRPQ010000848.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3293
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4498074"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1935
                     /locus_tag="VFD73_09655"
     CDS             <1..1935
                     /locus_tag="VFD73_09655"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI74270.1"
                     /translation="DMARRLARDAGVWTVVLGDFTPAGDTLHLAARVFDVASGKRVDV
                     ARVDDRPGADVRPLFDALAAKLLDLSGAPNEIKIGLARSTTGSLEAFRAYLSGVEQLN
                     RWDLAGAEREFERAITMDTTFGLAYYKLALTRGWLVGIDDSISNRAILRATAYSANLP
                     THDRTVINAYRAFIGSEFVDARALYQQLIARDTSDADAWYGLGEAWFHDTAGTNQAPA
                     WTHAMRAFKRTLSLDPNYALAYDHVHSMLSLAGASYPLYALLPGDSLAVTRTLSGRPL
                     MDSATVRAAVQRARNEALVSARTWVASQPTTLRAHAAMVNAYVSAGNYSGALSELERF
                     QAATPMHPELPFVEARVRFASGDVERAAAQLRTALDTVAPKDFRPYEGTPTVVSDIAA
                     AANVFAYQGDLTHAAKALDLADQVRQEVIFPPGSAEGPKGEYWRRMTFGELYAGLGAP
                     SSAMREIWQRAAEAARMAPAEQRKHIAHTGATAAIGLFTGLAADSTAFHEFQAISGEK
                     GAKEVRALLAVSRGDSTTARRTLAEPDSGYGKMMYTTFSRPLAAQAYYLLGDYETTIR
                     VLEGFQPEALQTGGFDARWAMLGRVRLLRGAAYERLGRRAEAREQYRQVLAQWKAADP
                     ALQPFIQQAQRGLARVGHAG"
     gene            2041..2449
                     /gene="rnpB"
                     /locus_tag="VFD73_09660"
     ncRNA           2041..2449
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VFD73_09660"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            2529..>3293
                     /locus_tag="VFD73_09665"
     CDS             2529..>3293
                     /locus_tag="VFD73_09665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74271.1"
                     /translation="MRVPTGLRAATLASLGVPALFTAPNAIRYRIDQTLSQEIDATAA
                     GGAKQKIAFRTSSFVSVTLTDSAGGKLIRVVIDSLRGDSATPIPPAVLDSARGAEFHG
                     FLEKSGRPSILKPVGGKPAATQVQGLLSDFFPWARPGMKVGEQWADTTANTNGVGSDS
                     VTVRRISAYKAASNQVRNSRKAVLVTQDFTSSVSGTQPTPQGPARIEGTGSGNGSYYV
                     GPDGMYLGGSWQQQSQLKISGSFSPQPLPITILQKTT"
BASE COUNT          641 a         1053 c         1071 g          528 t
ORIGIN      
        1 gacatggcgc gccgcctcgc tcgcgacgcg ggcgtgtgga ccgtggtact gggagatttc
       61 accccggcgg gggacactct ccatctcgct gcccgggtct tcgatgttgc cagtggcaag
      121 cgggtggacg tggcacgagt ggatgatcgg cccggcgccg acgtccggcc actcttcgac
      181 gcgctggcgg ccaagctgct cgatctttcc ggcgccccca acgagatcaa gatcggattg
      241 gcgcgttcta cgactggctc actggaagca tttcgcgcgt atctcagtgg cgtggaacag
      301 ttgaaccgct gggacctggc gggagccgag cgggagttcg agcgcgccat caccatggac
      361 acgacctttg gattggccta ctacaagctg gccctcaccc gcggctggct ggttggaatc
      421 gatgattcca tctccaatcg tgccattcta cgggccaccg catactccgc aaacctccca
      481 acacacgatc ggacggtcat caacgcgtac cgagcgttca tcgggagcga attcgtggac
      541 gcgcgcgccc tctatcagca actcatcgcc cgcgacacca gcgatgccga cgcgtggtac
      601 ggactgggag aagcctggtt ccacgacacc gcggggacga accaggcacc agcctggacc
      661 catgcgatgc gagcgttcaa gcgaaccctc tcgctcgacc cgaactacgc cttggcatac
      721 gatcacgtgc acagcatgct cagcctggcg ggtgcctctt accccctgta cgcgctgcta
      781 ccgggagact cgctggcggt gacccgcact ctgagcggcc ggccgctcat ggatagcgcg
      841 acggttcgtg ctgccgtcca gcgtgcccga aacgaggccc tggtctccgc cagaacctgg
      901 gtagcgagtc aaccaacgac gctccgggcc cacgccgcca tggtcaatgc ctatgtctcc
      961 gcaggcaact atagtggcgc gttatcggag ctggagcgct tccaggcggc aaccccgatg
     1021 caccccgaac tgccgttcgt ggaggcccgg gttcgcttcg catccggcga tgtcgaacgg
     1081 gcggcagcgc agctccgcac agcactcgac acggtggcgc cgaaggactt tcgaccatac
     1141 gagggaacgc caaccgtggt gagcgacatt gccgcggcag cgaacgtctt cgcctatcag
     1201 ggagacctca cgcatgcggc caaggccttg gacctcgccg atcaggtacg ccaggaggtg
     1261 atcttcccgc ccggctccgc cgaaggcccc aagggtgagt actggaggcg aatgacattc
     1321 ggcgagctgt acgccggttt aggggcgccg agctcggcga tgcgggagat ctggcagcgg
     1381 gcagcggaag cagcccggat ggctcccgct gagcagcgga agcatatcgc ccataccggc
     1441 gcgactgccg cgatcgggct gttcaccggc ctcgccgccg acagcacggc cttccacgag
     1501 ttccaggcaa tctcgggcga gaagggagcc aaagaggttc gagcgctgct cgcggtgagc
     1561 cgcggtgact cgacgacggc acggcggacc ctggcggagc cagattcggg atacggcaag
     1621 atgatgtaca ccaccttcag ccggccgttg gcagcccagg cgtactacct gctcggggat
     1681 tacgagacca cgatccgagt gctggaaggc ttccagcccg aagcacttca gaccggggga
     1741 tttgacgccc gttgggcgat gttgggccgg gttcgtctgc tccggggagc ggcatacgaa
     1801 cggttgggcc gtcgcgccga ggcgagagag caataccggc aggtgctggc tcagtggaag
     1861 gcagcagacc cggcgctgca accattcatc cagcaggcgc agcgtgggct tgcccgggta
     1921 gggcacgcgg gataggcagc ggggcagcga aatggcactg tggccaagag aacaagtcta
     1981 ttcgggtaaa cctcttacct ccttccccac tcccccgtct tccagctata ttgaatctac
     2041 tggtcaagca ggatggtcgc gggcgccgca aggcgctcga ggaaagtccg agctccaccg
     2101 ggtagactgc caggtaactc ctgggcgccg caaggcgacg gatagggcca cagaaaagag
     2161 accgccctga gcgagcgtaa gcgagcaaag ggtaagggtg aaacggtggg gtaagagccc
     2221 accgcaccgc tggtaacagt ggtggcacgg taacccccag tcggagcaag gccaaatagg
     2281 cggcgaggtg tgacccacac cgtccattcc gctccgcaag gaagcgggaa gccgcgggta
     2341 ggctgctaca ggtagtcggc gacggctatc gcagacagat gaccatctcc ccttcgctct
     2401 gatccagaga tctggggaaa cagaactcgg cttacggctc gaccagcggc ggccctccgg
     2461 cacccccgga gggctgttgg ttatggcccc tcggggtctt accttttctg gctcaaccgg
     2521 ggggaagcat gcgggtaccg accggcctgc gggccgcgac gctggcgagc ctaggcgtgc
     2581 cggcgctctt cactgcaccg aatgcgatca gatatcggat cgaccagact ctctcgcagg
     2641 agatcgacgc cacggcagcg gggggagcca agcagaagat cgcatttcgg accagcagtt
     2701 ttgtcagcgt caccctgacc gatagcgccg gcgggaagct catccgcgtt gtcatcgact
     2761 cgctgagagg tgacagtgcc acgccgattc cgccagccgt actcgacagc gcgcggggtg
     2821 cagagttcca tggcttcctc gagaaatccg gacgaccgtc gatactgaag ccggtcggag
     2881 gcaaaccggc ggcgacgcaa gtacaggggt tgctcagtga cttcttcccg tgggcccgac
     2941 ctggcatgaa ggtcggcgaa cagtgggcgg acacgaccgc gaataccaat ggggtcgggt
     3001 ccgatagcgt cactgtacga cgcatcagtg cctacaaggc cgcctccaat caggtccgaa
     3061 actcccgaaa agccgtgctg gtcacccagg acttcacgtc ctccgtctcc ggcacccaac
     3121 ccacgccgca ggggccggcg cggattgagg gaaccggtag cggcaacggt tcgtactatg
     3181 tggggcccga cgggatgtat ctgggtgggt catggcagca gcagtcacag ctcaagatct
     3241 ccggaagctt ctccccgcaa ccactgccga tcacgatcct tcagaagacc acg
//
LOCUS       DASRPQ010000849         1474 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_729950, whole genome shotgun sequence.
ACCESSION   DASRPQ010000849 DASRPQ010000000
VERSION     DASRPQ010000849.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1474
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_729950"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(219..839)
                     /locus_tag="VFD73_09670"
     CDS             complement(219..839)
                     /locus_tag="VFD73_09670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74272.1"
                     /translation="MSSKLDSSGQPYFQIKTEVSGSAYKETTVEYQDQVYSTLTTSSE
                     DHGPFTISAFLPLQSDKDPAIAFQQALKTGTIAVVGHRNLDGRDTILLRIKAGAAKAA
                     AGLPPDYIWLDSSTYLVVQTENFVPWALPSASRHLRIHGKQSWPPVDGNVSVIRGKVT
                     WSPVLHDVTWLPPTPGNLALLTLTPPAGFTKIPSSEMEKKYLGPIS"
     gene            complement(836..1351)
                     /locus_tag="VFD73_09675"
     CDS             complement(836..1351)
                     /locus_tag="VFD73_09675"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZI74273.1"
                     /translation="MPHGGRYDDLTAFLDARGDALLRTAVLLAPGREAGQDLLQEALE
                     RLLRKWHQVHGNPEGYLRRIMYHRAVDGWRRRGRRPEVIGLPAEAAVADHASRMDLRL
                     TLIAALELLTPRQRATVVARYWEQLSEAETAAALGCSVSAVKAAAARGLRTAARAESP
                     IRMWQPSSSGS"
BASE COUNT          249 a          474 c          493 g          258 t
ORIGIN      
        1 cggcgcctga tgaccgtcaa gccgaggatc atcgcagtcg agtcacggac cgccgaggtt
       61 gaagcgctcc ggcgggaatg gccgggctgt gctgaccaat ccggtccaca tcggcatcgg
      121 gacgaagtcg ccagagctgt gacccggcgg caacgacatc ggcgggaggc ctccgggcaa
      181 ctgcccggag gcctcccgcc ggccatgtgg ccagtttgtc aggaaatcgg gccgaggtac
      241 ttcttctcca tctccgacga gggaatcttg gtgaatccgg ccggcggggt cagggtgagc
      301 aaggccaggt tccctggggt aggaggcagc caggtaacgt cgtgaaggac cggcgaccag
      361 gtcaccttgc ccctgatcac ggacacgttg ccatcaaccg gcggccagga ctgcttgcca
      421 tggatccgaa ggtggcggct cgcactgggc agtgcccacg gcacgaaatt ctcggtctgg
      481 accaccaggt aagtgctgct gtcaagccag atgtagtccg gaggaagtcc ggcagcggct
      541 ttcgccgcac ctgccttgat gcggagcagg atcgtgtcac ggccgtccag gttccggtgg
      601 ccgaccaccg cgatggtgcc tgtcttcagg gcctgctgga aagcgatggc cgggtcctta
      661 tcggattgca gcggcaggaa ggcagagatg gtgaagggcc cgtggtcctc gctgctggtg
      721 gtgagggtgg agtagacctg gtcctggtat tcgacggtag tttccttata ggcgctcccg
      781 cttacctcgg tctttatctg aaaatagggc tgccccgagg aatcgagctt cgagctcacg
      841 atccgctgct gctgggttgc cacatacgta taggtgactc cgcccgcgcc gcggtccgga
      901 ggccgcgcgc ggcggctgct ttcaccgcgc tgaccgagca tccgagcgct gctgcggtct
      961 ctgcctcgct gagctgctcc cagtagcgcg ccacaaccgt tgcccgctgc cgtggcgtga
     1021 gcagctcgag cgcggcgatc agcgttagcc ggaggtccat ccgggaagcg tgatcagcca
     1081 ctgcggcctc cgccggaagt ccgatcacct ccggacgacg gccccgtctt cgccagccgt
     1141 cgacggcgcg gtggtacatg atgcgccgca ggtatccctc tgggttgcca tggacctggt
     1201 gccacttgcg aagcagccgt tccagggctt cctggagcag gtcctgcccc gcttcacggc
     1261 cgggcgccag caagactgcg gtccggagca gcgcgtcgcc gcgagcatca aggaacgccg
     1321 tcaggtcgtc gtaacgacca ccatgtggca tgtctgtcct cctctcggct acaagtacgc
     1381 cgggaggaag cacaaagtcg ctcgcctata cctccagcat caccggctca gcggaagcag
     1441 ttacggccgc acggggcaat ccgcccgcac cctg
//
LOCUS       DASRPQ010000850         1917 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4498103, whole genome shotgun sequence.
ACCESSION   DASRPQ010000850 DASRPQ010000000
VERSION     DASRPQ010000850.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1917
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4498103"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..950)
                     /locus_tag="VFD73_09680"
     CDS             complement(<1..950)
                     /locus_tag="VFD73_09680"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HZI74274.1"
                     /translation="MTSVSHDNYSTAETYSGRSAPWSQEAEQAVLGAMLLDQDAALRA
                     AELVDDSMFYREAHRRLFRAMLALTEQRTVIDHITLRDELLRRGELEIAGGLEYLAEL
                     VDAVPTAANIEFHAKIVKDKAILRRLIETSTGIITEAYDGHSTANDLLDSAEAKIFQI
                     SQQRGDQGFTRIKEMLWPTMERIETLQRSGKAITGVPSGFTDLDEMTSGFQPSELIIV
                     AARPSMGKTAFCLNVATQAAVDGFGVAVFSLEMSKEALVQRMLCAEARVDSQAVRRGT
                     LRDPDFTRLARAAGILQSCPVWIDDTPSLSLLEMRSKARRL"
     gene            complement(913..1779)
                     /locus_tag="VFD73_09685"
     CDS             complement(913..1779)
                     /locus_tag="VFD73_09685"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR00758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HZI74275.1"
                     /translation="MPGEWERYLRQQIELGGAEVVLSKAGQRGSGAAGQVASEAATAP
                     RHADLEAATEGVSQTQMPDAQPLPPGPAAPLPRWLHGAPPIPGPGLTIESPEHALLGD
                     DLVSLSTLDQVAERIRTTYCCALCPHRTNAVPGEGNPNARLFLCGEGPGATEDAQGRP
                     FVGQAGNLLNGILEAIEVPRESVYITNIVKCRPPQNRKPLPDEIAACIPYLHRQLEII
                     KPKVILALGSTAGEALLGVRKSLGELRGKVHTYNGIPLIVTYHPAALLRNPHWKKPTW
                     DDVRIARQLLDR"
BASE COUNT          318 a          599 c          633 g          367 t
ORIGIN      
        1 agccgccgag ccttcgagcg catttccagc agactcaggg agggtgtgtc gtcgatccag
       61 acggggcagc tctggaggat gcccgcggct cgtgccaggc gggtgaagtc gggatctctc
      121 agggtgccgc ggcgaaccgc ctgactgtcc acccgggctt cggcgcagag catgcgctgc
      181 accagcgctt ccttggacat ctcgagcgag aacaccgcca cgccgaaacc atcgaccgcg
      241 gcctgagtgg caacgttgag acaaaatgcg gtttttccca tggacggccg ggccgcgacg
      301 atgatcagct cgctgggctg gaaccccgag gtcatctcgt ccaaatctgt gaagccgctg
      361 ggaactccgg taatcgcttt cccactgcgc tggagcgttt cgatgcgctc catggtgggc
      421 cacaacatct ctttgatccg ggtgaagccc tggtcgccgc gctgttgcga gatctggaag
      481 atcttggctt cggcgctgtc gaggagatcg ttggcggtgg agtgcccgtc gtacgcttcg
      541 gtgatgatgc cggtggaggt ctcgatcagc cgccggagaa tggccttgtc tttgacgatc
      601 ttggcgtgaa actcgatgtt ggccgcggtg ggtaccgcgt cgaccagctc cgccagatat
      661 tcgaggccgc ccgcgatctc cagctctcct cgccggagga gctcgtcacg cagggtgata
      721 tgatcgatga cggtgcgctg ttcggtgagc gccagcatgg cgcgaaagag ccggcggtgc
      781 gcctcccggt aaaacatgga gtcgtccacc agctcggcgg cgcgcagcgc ggcgtcctgg
      841 tccagcagca tggcgccgag gacagcctgc tccgcctcct ggctccacgg ggcggatcgg
      901 ccggagtagg tctcagcggt cgagtagttg tcgtgcgata cggacgtcat cccaggtcgg
      961 cttcttccaa tgtgggttcc ggagcagcgc cgccggatga tacgtcacga tcagcggaat
     1021 tccattgtac gtgtgcacct tgccccgcaa ctctcccaga ctcttcctca cgccgagcag
     1081 agcctcgccc gcggtgctgc cgagggcaag gatcactttc ggtttgatga tctcgagctg
     1141 gcggtgcaga tatggaatac aggctgcgat ctcatccggc agcggctttc gattctgagg
     1201 gggtcggcac tttacgatgt tcgtgatgta cactgattca cggggaactt caatagcttc
     1261 gagaattccg ttgagcagat tgccggcttg acctacgaac ggtcggcctt gcgcgtcctc
     1321 ggttgcacct ggtccctcac cgcagaggaa caggcgagcg ttggggttgc cctctccggg
     1381 gactgcattg gtgcggtggg gacacaatgc gcagcagtag gtcgtgcgga ttcgctcggc
     1441 cacctggtcc agcgtgctca aggaaacgag atcatcgccc agcagcgcgt gctcgggcga
     1501 ctcaatcgtg aggccggggc caggaatcgg aggagcaccg tggagccagc ggggcagcgg
     1561 ggcagcgggg ccggggggca gtggctgtgc atccggcatc tgagtctgcg aaacaccctc
     1621 ggtggctgct tcgaggtcag catgccgcgg agcagttgct gcctcactgg caacctgccc
     1681 ggctgccccg ctgccccgct gccccgcctt cgagagcact acctccgctc ccccgagctc
     1741 gatctgctgc cgcaggtacc gctcccattc accgggcaag gttctgctcc acccgatcga
     1801 gaatggcctc cgccacctcc cgcttggact ggagcggcag aatctgacga gtgccgtcac
     1861 gaccgagcag tgccacgcga ttggtctctt tctcgaaacc ggcgccgggc tcgagcg
//
LOCUS       DASRPQ010000851         1490 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1353711, whole genome shotgun sequence.
ACCESSION   DASRPQ010000851 DASRPQ010000000
VERSION     DASRPQ010000851.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1490
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1353711"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..300)
                     /locus_tag="VFD73_09690"
     CDS             complement(<1..300)
                     /locus_tag="VFD73_09690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74276.1"
                     /translation="MLKRIILIGAMTSVAVGPADAQSLEARIGRFWDASGWTTYRIGV
                     SQPLIGVFGVQLHGDVARRYDTGPGGLAGLGADLTVFRRAAGGPYLVAGMSGGMGS"
     gene            complement(310..603)
                     /locus_tag="VFD73_09695"
     CDS             complement(310..603)
                     /locus_tag="VFD73_09695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74277.1"
                     /translation="MPESRPADSLALSAPGGVQVWFTLARADNAPDGKRCQERGLEIR
                     RGSARIPVPLLYTGEAPRLINDTTVRARLWKSCTPGDSYLVDLRTGRPVRAPR"
     gene            complement(707..1036)
                     /locus_tag="VFD73_09700"
     CDS             complement(707..1036)
                     /locus_tag="VFD73_09700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74278.1"
                     /translation="MRWVRLFFRIFGWLLTPFLAWAASFFGAVLGALLAIKLDDPVRG
                     LVVTAVCGGLAGFAALIGWLRYLRRSPEVREVLAVTEDGTPDTTELAGVPEVPEELTE
                     PEPSQPS"
     gene            complement(1041..>1490)
                     /locus_tag="VFD73_09705"
     CDS             complement(1041..>1490)
                     /locus_tag="VFD73_09705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74279.1"
                     /translation="VSAVSILPGLWTRARTIEGIAGAAGIGLAAAGVFLLLDVMLLQN
                     IGTYTDRWYQIGGGSTWWYHPVWWMVGTFLPWMGAWILANQTARSGSPSAGRAIAMAV
                     GFSVIVACLAIVLGFPEARWTLGTFAVAFLPGLVLAAIVSGIGKRRA"
BASE COUNT          303 a          513 c          458 g          216 t
ORIGIN      
        1 cgaccccatc cctccactca taccagcgac gaggtagggg ccacccgccg cgcgccgaaa
       61 gacggtgagg tccgccccca gaccggccag accgccgggg ccggtgtcgt atctccgtgc
      121 gacatctcca tgcagttgca ccccgaacac accgatcaac ggctgactta caccgatgcg
      181 ataggtcgtc cagccggatg cgtcccagaa gcgaccaatt ctcgcctcga gactctgggc
      241 gtcagccggt ccgaccgcca cactggtcat cgctccgatc aggatgatgc gcttgagcat
      301 tgatccctct tatctaggcg ctcgcaccgg tcgcccggtg cggaggtcga cgagatagct
      361 gtcgcccgga gtgcagctct tccacaaccg ggctcgaacc gtggtgtcgt tgatcagccg
      421 gggtgcttcg ccagtgtaga gcagcggaac cggaatccga gcactgccac gacggatttc
      481 cagaccgcgc tcctgacacc gtttcccgtc aggcgcatta tcggcccgcg ccagcgtaaa
      541 ccagacctga acgccaccag gggcggagag cgccagagag tccgctgggc gggactctgg
      601 catccggtca gtgctgggag gagtgcctgg tcgcgattgg catgcacaac aggcgagcac
      661 cccaaggatg cggcggcgga tcggtcgacc agtgctgagc aaccgatcaa ctcggctggg
      721 agggctctgg ctcggtcagc tcttccggta cctcgggtac gccggcgagc tcggtcgtgt
      781 cgggagtgcc gtcttcggta acggcaagga cctcccgtac ctccggcgaa cggcggagat
      841 accgaagcca gccgatcagc gcggcgaacc ctgccaagcc gccgcacacg gcggtgacca
      901 ccaacccccg caccgggtca tccagtttga tcgcgaggag ggcgccgagc accgcaccga
      961 aaaaagaggc tgcccaggcc aggaatggag tgagcagcca tccgaagatt cggaagaaaa
     1021 gacggaccca gcgcatcgcc tcaggcgcgg cgtttcccaa tacctgagac gatggccgcc
     1081 aacaccaacc cggggaggaa cgccaccgca aacgtgccca gcgtccagcg cgcctcggga
     1141 aatccgagca caatcgccag acaggcaacg atgacggaaa accccacggc catggcaatc
     1201 gccctgcctg cggatggact accgcttcga gcagtctgat tggccagaat ccaggcaccc
     1261 atccagggga gaaatgtgcc gaccatccac cagaccgggt gataccacca ggtactgccg
     1321 ccgccgatct ggtaccagcg gtcggtgtac gtgccgatgt tctggagcag catgacgtcg
     1381 agcagcagaa acacgccggc tgccgccagg ccgattcccg ctgccccagc gatcccctcg
     1441 atggttcgcg ctctggtcca gagtcccggc aggatgctca ccgcgctcac
//
LOCUS       DASRPQ010000852         1159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_730073, whole genome shotgun sequence.
ACCESSION   DASRPQ010000852 DASRPQ010000000
VERSION     DASRPQ010000852.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1159
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_730073"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            64..>1159
                     /locus_tag="VFD73_09710"
     CDS             64..>1159
                     /locus_tag="VFD73_09710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74280.1"
                     /translation="MPDRKLPPRWVAVLVIIGSVFLSASAGANPVAPPDPGSCRGPDA
                     PITTVVDSIRHNVIITLGPCTVPALGTMNMGRMSDMEMMVHSPGHEDVRAHFRWPANV
                     WMRSFDLALFDRNHHRLDQPTTMHHMELLNFDRRQIIYPMVERVFGMGEETSGAKIPK
                     SVGLPLDAGMDMGLYVMWNNHTDHPIDGVSFQLTIGYSPRNLVPRPIPVLPFKADVNV
                     HPGAGDAFDLPPGGGSRSSTFTMEVSGRLLAVGGHLHDYGKELRLEDATTGKVLVRVR
                     AQRTPDGLVTGVSHGLYGILGRGPHLIAGRQYRLVAVYQGSPADSIRGAMGMMGGIFA
                     PDHYARWPKLDRTNPDYIVDLNPALARRTIV"
BASE COUNT          207 a          375 c          352 g          225 t
ORIGIN      
        1 agtggcgtgc tccatgcacc aagcggtcag ccaccgtcga acaagtccct ctttggagtg
       61 atcatgccag accggaaact gccgccccgg tgggtcgccg tccttgtcat catcggttcg
      121 gttttcctga gcgcttcagc cggcgccaat cctgtggctc cgcccgatcc agggagctgc
      181 cgcggtcccg acgcgccgat cacgacggtg gtcgactcca tcagacacaa tgtcatcatc
      241 accctcggcc cctgcaccgt gcctgcgctg ggcacgatga acatgggccg gatgtcggac
      301 atggaaatga tggttcacag tcctggccac gaggacgtgc gggcccactt ccgctggccg
      361 gccaacgtgt ggatgcgctc cttcgatctc gcgctcttcg accggaatca tcaccggctc
      421 gaccagccga ccaccatgca tcacatggag ctgctgaatt tcgatcggcg gcaaatcatc
      481 tacccgatgg tggaacgggt cttcggcatg ggcgaggaga ccagcggggc gaagattccc
      541 aagtcggtgg gactgcctct cgacgcgggg atggatatgg gcctctacgt catgtggaac
      601 aaccacaccg atcacccgat cgatggtgtg agcttccagc tcaccatcgg ctattcaccg
      661 cgcaacctgg tgcctcgtcc tattcccgtc cttccattca aggccgatgt caacgtgcat
      721 ccgggagccg gcgatgcttt cgatcttcct cccggtggtg gatcgcgctc cagcacattt
      781 accatggagg tcagcggaag gttgctcgcc gtcggaggac acctgcacga ctacggcaag
      841 gagctgcggc tggaggacgc caccaccggc aaagtgctgg ttcgggtgag agcccagcgc
      901 acgcccgacg ggttggtgac cggcgtgtcc cacggattgt acgggatcct gggccgggga
      961 ccgcatctca tcgcgggacg gcagtaccgg ctcgttgccg tgtatcaggg aagtccggct
     1021 gattccatcc ggggtgccat gggaatgatg ggcggaatct ttgcgcccga tcattacgcc
     1081 cgctggccca agctcgaccg tacgaatccc gattacatcg tggatctgaa tcccgctctc
     1141 gcccgtcgca ccatcgtgg
//
LOCUS       DASRPQ010000853         1015 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1667587, whole genome shotgun sequence.
ACCESSION   DASRPQ010000853 DASRPQ010000000
VERSION     DASRPQ010000853.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1667587"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..274)
                     /locus_tag="VFD73_09715"
     CDS             complement(<1..274)
                     /locus_tag="VFD73_09715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041836501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZI74281.1"
                     /translation="MLFYRAALPLSSRTLTFVAGLIRRHRAAIGSPWRKLNPGRQALL
                     VLAYLRKGDTFAELAAGFAVGTTTAWRYVSETTTLLAARAPKLRTAV"
BASE COUNT          182 a          298 c          355 g          180 t
ORIGIN      
        1 ggaccgcggt gcgcagcttc ggcgcccggg ccgccagcag ggttgtcgtc tcgctgacgt
       61 accgccaggc cgtggtggtg ccgactgcga acccggccgc gagctcggcg aatgtatcgc
      121 ctttgcgcag gtaggcgagc acgagcaggg cctgccggcc ggggttgagc ttgcgccagg
      181 gtgagccgat cgcggcgcgg tggcggcgga tgaggccggc cacgaaggtc agggtccggg
      241 acgacaacgg cagcgcggca cggtagaaaa gcacaagagc ccctggtggc gatgaaggtc
      301 gttttggtcg actgcctcat ctaccagggg cttcttggct atcaggagcg acgcgcccta
      361 ggttcaccag atcgtgacga acccatcacc accaggatga aaagggctca tgggcccggt
      421 cgggcagggc ggcggcggtc ccgcagctgc ggctggaggt ttgctgactt aatccccgcc
      481 cataggccga tggtgagcag aaccaggatg atccatccaa tcccaaccca ccgattcact
      541 ggcttcctgg gcggctccgg ccatcgcttc ggcaggcgtt gcgcaagcag gtaaacgaga
      601 cccccgatga tgagcaggac ccgatcaaga tcgcaatcag caggaccgag gccgcaagtc
      661 cagcgaccta cgcatttcga gggtgttctc gtgcgttgat cgggagttca atgcctgtat
      721 ttgctagcgg ttcacagaat gctggcggcg tcagtcgctg gctattgatg gccgttcggg
      781 agcatctcgg ggcacgtgcc tggcgggtgc gtcggtcagg gacggagcct gctgagttgc
      841 gggtcgtagc agatgagacc atgcttcacg gcgaactggc tggcccattc tgatgtctca
      901 ccccatcggc tatagaccat gccgaagtag aggagcggtc cggaggcgtc tccgatgagc
      961 ggggcgtcag gctataggct gtcgtcttca tcctccgagt cagatgtagc cgggc
//
LOCUS       DASRPQ010000854         1217 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_730268, whole genome shotgun sequence.
ACCESSION   DASRPQ010000854 DASRPQ010000000
VERSION     DASRPQ010000854.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1217
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_730268"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..946
                     /locus_tag="VFD73_09720"
     CDS             <1..946
                     /locus_tag="VFD73_09720"
                     /inference="COORDINATES: protein motif:HMM:NF037015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HZI74282.1"
                     /translation="AVSVVDQYGVTGTNGPVVFRVNRPPAITLSSPTNTALFAVGASV
                     PLRAVAADADGTIEHVSFLANGTLVGTVSNSPFQLALTNLTAGHWAIQARAVDDVGDA
                     ATSSVASVTVYLPPPNDQFAQRSLLPLSINRVAGNTMYASAEPNEPGLVGLPPRQTLW
                     WSWVAPFSARAFASTRGSDFDTLLAVFVGDSLTNLNLLAVNNNETTQMISSRVEFQAV
                     AGANYHFVVDGTLGQAGAVRLTVGPVVRLTITNGFETNLTLHVSGATNVTYILQQTSD
                     LSAWRSVQTNVPAAVPFRWVEPKPGADEPQFYRILLEP"
     gene            985..>1217
                     /locus_tag="VFD73_09725"
     CDS             985..>1217
                     /locus_tag="VFD73_09725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74283.1"
                     /translation="MKRCAPGAGAGKKRRIAACRASLGLCAIIGGLNVAALGQGGVLE
                     QLRWTSAPSNAVAGVPFGASILAVDPSGAPATN"
BASE COUNT          208 a          372 c          393 g          244 t
ORIGIN      
        1 cgcggtgagc gtcgtggacc agtatggcgt aactgggacc aatggcccgg tggttttccg
       61 cgtcaaccgg cctccggcca tcaccctgtc gagccccact aacacagcgt tgttcgcggt
      121 cggtgcgagc gtcccgctca gagcggtcgc tgcggacgcc gacgggacca tcgagcacgt
      181 ctccttcctt gccaatggaa cgttggttgg aaccgtgtcc aacagtccat ttcagctcgc
      241 gttgacgaac ctgaccgctg gccattgggc cattcaggcc cgggcggtgg atgacgtggg
      301 cgatgccgcg acctccagcg tggcgagtgt gacggtctat cttcccccgc ctaatgatca
      361 atttgcccag cgcagcctcc tgccgctctc gattaaccgc gtggccggca acaccatgta
      421 tgcgagcgcc gagcccaacg agccgggtct cgtggggctt cctccgcgcc agacgctgtg
      481 gtggagctgg gttgcgccgt tttccgcccg cgcgttcgct tccacgcggg gcagcgattt
      541 cgacacgctg ctggcggtgt ttgtgggcga tagcctaact aacctgaacc tgctggccgt
      601 gaacaacaat gaaaccacgc agatgattag cagccgggtg gagttccaag ctgttgcggg
      661 agccaattat cattttgtgg tcgatggcac tctcggccag gcgggcgccg tgcggttgac
      721 cgttggcccg gtcgtcaggc tgacgatcac gaatggcttt gaaacgaatt tgaccctcca
      781 tgtttcggga gcgacgaatg tcacctacat cctgcagcag acgtccgatc tgagcgcctg
      841 gcgctcggtc cagacgaacg tgccggccgc cgtgcccttc cgttgggtgg agcccaaacc
      901 cggagccgac gagccacaat tttaccggat tctgttggag ccgtagccgc caatggggac
      961 tgcagacgat gaggacttga tcatatgaag cgttgtgcgc caggagcggg agccggaaaa
     1021 aagcggcgga tcgcagcttg ccgggcctct cttggcttgt gcgccatcat cgggggattg
     1081 aatgttgcgg ctctcgggca aggcggtgtg ctggaacaac tgcgctggac gagcgcaccg
     1141 tccaatgccg tcgcgggagt tcccttcggt gcgtcaatcc tggccgtcga tccgagcggg
     1201 gcgccggcca cgaattt
//
LOCUS       DASRPQ010000855         1235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1987646, whole genome shotgun sequence.
ACCESSION   DASRPQ010000855 DASRPQ010000000
VERSION     DASRPQ010000855.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1987646"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..180)
                     /locus_tag="VFD73_09730"
     CDS             complement(<1..180)
                     /locus_tag="VFD73_09730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74284.1"
                     /translation="MRSAIHSRLVAAGVEEEFHIVDLATRRLTGQADRLMGQLPADRF
                     SWEMQRSVVEANSRPW"
     gene            complement(517..>1235)
                     /locus_tag="VFD73_09735"
     CDS             complement(517..>1235)
                     /locus_tag="VFD73_09735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74285.1"
                     /translation="HAQVCGEVTEYYRHVSIIVEKPAADNLEDAQRIICDIGDKQPVA
                     VAYHMAFSPVVDWALKEVAERADELGPPTAIESWGTDPYQSELASAQARLGNSWIDSG
                     INALSVIERFVKPVERTSLRQIGTSSRSVFEGTFICEADGQQLPATILTSWYSTAPSR
                     WTRIRYSSGAELFMDHNAVAGYIRQNGEACAIFGSDGTMPRREAHYRALYKSWLTKQD
                     QIFSTDTSVRLHALLLANGS"
BASE COUNT          232 a          396 c          371 g          236 t
ORIGIN      
        1 ccagggacgg ctgttcgcct cgacgaccga gcgctgcatc tcccagctga accggtcagc
       61 gggcagctgc cccatgagcc tgtcagcctg cccggtcagc cgccgcgtgg ccaggtcgac
      121 gatatggaac tcctcctcca ccccggctgc cacgagccgg gaatggatgg ctgagcgcat
      181 gacggtctcc atccggtagc ggcaccggcg ttcctgcagg gccggtgact acgcaccagg
      241 ctggccggtg ccgctgcaac gcggctccaa cgcggctgga acgacgcagc aggcccgggc
      301 agggaaccca ggtcagcacc acggcgcggg tggtgagctc ccgcggccgg cgtgacctcc
      361 gggacgacga accgtccgcc gcaaaacagc gcgttccacg caaacgcggc agcccagcac
      421 ccgccccgtc agcggcatga gcgtgcattg ctggtgctgg cccggtctgc gtattcatgc
      481 aatccgacct ggccgatcac tccctgctta tcgatactaa cttccgttgg caagaaggag
      541 agcgtgcaga cgcacgctgg tgtctgtgga gaaaatctga tcctgcttag taagccacga
      601 cttgtacaaa gccctgtagt gggcctcccg gcgcggcatg gttccgtcgc tgccgaatat
      661 ggcgcaggcc tcaccgttct gccggatgta gccggccaca gcattatgat ccataaatag
      721 ctccgcgccc gaggagtatc ttatccttgt ccatctcgag ggcgcagtag agtaccagct
      781 cgtcaggatg gtcgctggca gttgctggcc atcggcttcg cagatgaagg ttccttcgaa
      841 tactgacctg gaagaagttc caatctggcg cagcgacgtg cgctcgacgg gctttacgaa
      901 gcgctcgatg acgctcagag cattaattcc gctgtcaatc cagctattcc cgagcctggc
      961 ctgcgcagag gccagttctg actgatacgg atcagtaccc cacgactcga tagcagtcgg
     1021 cggcccgagt tcgtcagccc tttcggctac ctctttgagg gcccagtcta ctaccgggga
     1081 aaacgccatg tggtatgcga cggcaaccgg ttgcttgtcg ccaatatcgc agataatgcg
     1141 ctgagcgtcc tctagattat cagcggcggg cttctccacg atgattgata catgccggta
     1201 gtattcggtt acttcgccgc atacctgggc atgcg
//
LOCUS       DASRPQ010000856         3010 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1354363, whole genome shotgun sequence.
ACCESSION   DASRPQ010000856 DASRPQ010000000
VERSION     DASRPQ010000856.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3010
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1354363"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1302
                     /locus_tag="VFD73_09740"
     CDS             <1..1302
                     /locus_tag="VFD73_09740"
                     /inference="COORDINATES: protein motif:HMM:NF014587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA phosphatase family protein"
                     /protein_id="HZI74286.1"
                     /translation="RQLKVNIEVISGEEEAQLAFRTASRHFDFQGRPTAVVDIGGGSL
                     EVILSAGTAIDHVYSLPLGAVRVTERLARSDPLKPRHWKEMKAEIDGIIRGAIRQPAH
                     RAELMIGSGGTFTALAHMIKFQRENRHGSVQGFVLSPSDLIHLLRRLRETPLEARREI
                     PGLSADRADIIVAGAAVISRLVRALDTEQIMVNERGIRDGLLLHMISELPGRSPATTS
                     PLPGNRIEWARHFARKAHSNEQHCEQVASLALQLFDGLKARFDLPPQSRDLLHAAAIL
                     HDIGYLISHSKHHKHAYHLIMHGDLPGFTPHEVELIANLVRYHRKAFPKKRHENLAYL
                     DRNDRRLIARLSGILRIAEGLDRTHSQSVTGLKLRALKGRLRVSVEAKSFPEIEILDA
                     ARKADLFRKAFGTDIELAWQPVRAQSKTNGAGRNRLHIVAS"
     gene            1311..>3010
                     /gene="ppk1"
                     /locus_tag="VFD73_09745"
     CDS             1311..>3010
                     /gene="ppk1"
                     /locus_tag="VFD73_09745"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: protein motif:HMM:NF003921.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HZI74287.1"
                     /translation="MLKNSSEFPQENYLNRELSWLEFNARVLEEAADPTNPALERLKF
                     LSIVSSNLDEFFEVRVAGLQEQLYAGLEPQDFPADGLAPTEQLDRIDHRAHQLVADQY
                     RLLHEELIPQLRQNGIEWVRLEELTPPERAYVDRLFVSSVYPVLTPLAIDPGHPFPHV
                     HNKSLNIALLVERKNVSQLQELFAVVQVPAVLDRVVVLPASAERLRFVLLEDIVAANL
                     ETLFGGFRVLAHTVFRVTRNTDLAFDEDDAEDLLQTIEENLRQRMRGDAVRLEISETA
                     DERFVQMLVTALDLHGRDVYRVTGPIDLTGFLALHRMDRFRTLKDEPLVPVVPASFAA
                     APDVFDLIRAQDILVHHPYESFGPVVNFIERAADDPQVLAIKQTLYRTSGASPIIRAL
                     ERAAQNGKQVTALVELKARFDEENNIVWARSLEHAGVHVVYGVVGLKTHCKVALVVRR
                     EPDGIRRYVHLSTGNYNPTTARIYTDVGLFTARPEFGEDASELFNLLTGYSQGRRWRK
                     FLVAPLGLREQVVELIGREGRNAELGRPARIIVKMNALVEPTVINALYRAAQSGVKVD
                     L"
BASE COUNT          559 a          996 c          927 g          528 t
ORIGIN      
        1 cgccagctca aggtcaacat cgaggtgatc tccggcgagg aagaagccca gctcgccttc
       61 cgcactgcca gccgccactt cgattttcag ggccgaccga ccgcggtggt ggacatcggc
      121 ggcggcagcc tcgaggtcat cctctccgcc ggcaccgcca tcgaccacgt ctattccctt
      181 cccctcggcg ccgttcgcgt caccgaacgt ctggcccgct ccgatccgct caagccgaga
      241 cactggaagg agatgaaggc ggagatcgac gggataattc gcggggcgat tcgacagccg
      301 gcccaccggg ccgagctgat gatcggcagc ggtggcacgt ttaccgcact ggcccacatg
      361 atcaagttcc agcgcgagaa tcggcacggc tcggtgcagg ggttcgtgct cagtccgtcc
      421 gacctcattc atcttctccg acgtctcaga gagacaccgc tcgaggcacg gcgagagatt
      481 ccgggcctga gcgctgatcg agcggacatc atcgttgccg gcgcggccgt gatctcccga
      541 ctggtgcggg cgctcgatac cgagcagatc atggtgaacg agcgcgggat tcgagacggt
      601 cttctgctcc acatgatctc ggagctgccc ggacgttccc cagcgacaac gtcgccgctt
      661 cccggcaacc ggattgaatg ggcccgccac tttgcccgga aagcccattc gaacgagcag
      721 cattgtgagc aggtcgccag tctggcgctg cagttgttcg atggtctcaa ggcgcgtttc
      781 gacctgccgc cacaaagccg cgatctcctc cacgccgcgg cgatcctgca cgacatcggc
      841 tacctgatca gccactccaa gcaccacaag catgcgtatc atctgatcat gcacggcgac
      901 ctgccggggt tcacgcctca cgaggtcgag ctgatcgcca atctggtacg ctaccaccgg
      961 aaagcgttcc ccaaaaaacg gcacgagaat ctggcctacc tcgaccgcaa cgaccggcgc
     1021 ctgatcgcga gactgagtgg gattcttcga attgccgagg gactcgaccg gacccactca
     1081 caatcggtga ccgggcttaa gcttcgcgcg ctcaagggac gtctgcgggt gagcgtcgag
     1141 gccaagtcgt ttcccgagat cgagattctc gatgcagccc gtaaagccga tctcttccgc
     1201 aaggcgttcg gcaccgacat cgagctggcc tggcagccgg tccgggccca gtccaaaacc
     1261 aacggcgccg gccggaaccg gcttcacatc gtggcgagct aaaccccctc atgctcaaga
     1321 actcgtccga gtttccccag gagaattacc tcaaccgcga gctcagctgg ctcgagttca
     1381 acgcccgggt gctggaagag gccgcggatc cgaccaatcc ggcgctcgag cggctcaagt
     1441 tcctctccat cgtgagctcg aacctcgacg agttcttcga ggtccgggtg gcggggctgc
     1501 aggagcagct ctatgccggc ctcgagccgc aggattttcc ggccgacgga ttagcgccga
     1561 ctgagcagct cgaccggatc gatcatcggg cccaccagct ggtggccgac caataccgac
     1621 tgctgcatga ggagctaatt cctcagctcc ggcaaaacgg aatcgaatgg gtgcggctgg
     1681 aggagctcac ccctccagag cgggcctatg tcgaccggct gttcgtcagc agcgtgtatc
     1741 cggtgctgac gccgctggcg atcgatcccg ggcacccttt cccccacgtg cacaacaaga
     1801 gcctcaacat cgctctcctg gtcgagcgca agaacgtgag ccagctccag gagctattcg
     1861 ccgtggttca ggtgcccgca gtgctcgacc gtgtggtggt gctccccgct tctgcggagc
     1921 ggcttcggtt tgtgctcttg gaggacatcg tcgccgccaa cctggagacc ctgttcggcg
     1981 gattccgggt attggcccac accgtcttcc gggtcacccg caataccgat ctcgccttcg
     2041 acgaagatga cgccgaggac ctgctccaga ccatcgaaga gaatctccgc cagcggatgc
     2101 ggggcgatgc ggtgcggctg gagatctcgg agaccgccga cgagcggttc gtgcagatgc
     2161 tggtcacggc gctcgatctc catggccgag acgtgtaccg ggtgaccggc ccgatcgatc
     2221 tcaccggctt cctcgcgctg caccggatgg accgattcag gacgctcaag gacgaaccgc
     2281 tggtgccggt cgtacctgcc tccttcgccg ccgcccccga tgtgttcgac ctcattcggg
     2341 cgcaggacat tctggtgcat cacccgtacg agtcgttcgg tccggtggtg aacttcatcg
     2401 aacgcgccgc cgacgatcct caggtgctcg cgatcaagca gacgctgtac cgcaccagcg
     2461 gcgccagccc gattattcgc gcactggaac gggccgccca gaacgggaaa caggtcactg
     2521 cgctggtcga gctgaaggcc cggttcgatg aggagaacaa catcgtctgg gcccgctcgc
     2581 tggagcatgc gggcgtccac gtcgtctacg gagtcgtggg actcaagacc cactgcaagg
     2641 tggcattggt cgtgcgccgc gagccggacg ggatccggcg gtacgtccat ctctccaccg
     2701 gcaactacaa cccgacgacg gcccggatct acaccgatgt gggcctgttc acggcccgcc
     2761 cggagttcgg tgaggacgca agcgagctgt tcaatctgct caccggatat tcccagggcc
     2821 ggcggtggcg caagttcctg gtggcgcctc taggattacg ggagcaggta gtcgagctga
     2881 tcggccgcga gggacgcaac gcagagttgg gccggcccgc ccggatcatc gtcaagatga
     2941 atgcattggt cgaaccgacg gtgatcaacg cgctctatcg cgcggcacag agcggcgtca
     3001 aggtcgatct
//
LOCUS       DASRPQ010000857         1412 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1988152, whole genome shotgun sequence.
ACCESSION   DASRPQ010000857 DASRPQ010000000
VERSION     DASRPQ010000857.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1412
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1988152"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1412
                     /locus_tag="VFD73_09750"
     CDS             <1..>1412
                     /locus_tag="VFD73_09750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74288.1"
                     /translation="KPSHINIGYSSTDPAQVKRQISDMVSRGIDGVVMVWYGPNNEID
                     RAAKLVMHEAETHPGFTFAIMVDSGAIRWYSCPGCSPQQALNNDLQYVEQTYFPSPAY
                     LRVGGRPVVTNFDVDLHYTIDWSAAKAALATNPMFLFQHGRGFSHAESAGAYSWDIAT
                     SSDFGMGYLTSFYKTGMASQGDQTWGASYKGFNDKLASWGLNRIMDQRCGQTWLQTFA
                     KINSLYNSTNQLGAMQLVTWNDYEEGTEIESGIDNCVSVSAALAGSSLQWKIAGSEDT
                     IDHYRVYVSSDGQNLMPLADQTVGTSALDLCGYSLAAGNYKLFVQAIGKPNLKNQISA
                     PIPYAPQCGGTSSSGPPEGTPGTPPVTSPPPPASGSVISLSASPSSVTIADGQSGSPR
                     ITVTARSKSAGPIALSCSGLPAAMSCTFSPSVITAAGKAATSILRVSVVRPAHRPGPV
                     PRPPRRGALVGFGLGMVGVLV"
BASE COUNT          283 a          445 c          410 g          274 t
ORIGIN      
        1 aagcccagcc acatcaacat cggttacagt tcgaccgatc cggcccaggt caagcggcaa
       61 atctcggaca tggtcagccg cggcatcgac ggagtggtca tggtctggta cggaccgaac
      121 aacgagatcg accgcgccgc caagctggtg atgcacgaag ctgaaaccca tcccggcttc
      181 actttcgcga tcatggtgga cagcggtgcc attcgctggt actcctgccc gggatgcagt
      241 ccgcagcagg ccctgaataa tgacttgcag tacgtcgagc agacgtactt tccctcacct
      301 gcatatctga gggtgggtgg tcgcccagtc gtcaccaact tcgacgtgga cctccactac
      361 acgattgatt ggagtgcggc caaagccgca ctggccacca accctatgtt cctgtttcag
      421 catggccgcg gtttcagcca tgctgagagc gccggtgcgt actcctggga catcgccacc
      481 agcagcgatt ttggcatggg ctatctgacc agcttttaca aaaccggcat ggcatcccag
      541 ggcgaccaaa cctggggcgc gtcttataaa ggattcaacg acaagctggc ctcctggggg
      601 ctgaaccgca tcatggacca gcgctgcggc cagacctggc tgcagacgtt cgccaagatc
      661 aacagcctgt acaactcgac caatcagctc ggcgccatgc agctggtcac ctggaatgac
      721 tacgaagaag gaacggagat cgaatccgga attgataact gcgtgagcgt ctcagcggcc
      781 ttggcaggca gttcgctgca gtggaagatc gccgggagtg aagacaccat cgatcactat
      841 cgggtctatg tcagttccga tggccagaat ctgatgccgc tggcggacca gaccgtgggc
      901 acgtctgccc tcgatctgtg cgggtactcg ctggccgcgg gcaactacaa attgtttgtg
      961 caggccatcg ggaaaccgaa cctgaaaaac cagatttccg cgcccatacc ctatgcacca
     1021 caatgcggcg gaacttcgtc ttccggccct ccggaaggca ctccgggcac gcctccggtg
     1081 acttcgccac cgccgccagc gtccggttcg gtaatttcgc tgagcgcatc accatcgtcg
     1141 gtcacgatcg cggacggaca gtcgggaagt ccccggatca cggtaaccgc acgatcaaag
     1201 tccgccggcc ccatcgcgct gtcctgctcc gggcttccgg ctgcgatgtc gtgcaccttc
     1261 tctccgtccg tgattactgc cgcgggcaaa gctgcgacgt caattctcag agtctcggtt
     1321 gtccgcccgg cacatcgtcc ggggcccgta cccagaccgc ctcgccgggg tgcactggtc
     1381 ggttttgggc tggggatggt tggagtgctt gt
//
LOCUS       DASRPQ010000858         2753 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4499853, whole genome shotgun sequence.
ACCESSION   DASRPQ010000858 DASRPQ010000000
VERSION     DASRPQ010000858.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2753
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4499853"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..780)
                     /locus_tag="VFD73_09755"
     CDS             complement(<1..780)
                     /locus_tag="VFD73_09755"
                     /inference="COORDINATES: protein motif:HMM:NF013734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase beta subunit-related
                     protein"
                     /protein_id="HZI74289.1"
                     /translation="MNVSRRWLEDFLRRPLDARDLVERLTMLGAPVDGVQPLHADLED
                     IVVGLVEEVRPHPNADRLRVCAVNGGNSERLNVVCGASNVTAGKKYPFAPIGSTLPGG
                     LRIEGRKLRGETSEGMLCSARELGLGQDGEGILELDTDAAPGTRLLDALPLGDDRLIV
                     DVGPNRPDLLGHKGIARELSASYGIPFRLPAIPGASLIDVPPVRRAGNVALVGGVRAG
                     TEDPEGCPRLLGAVLRGVKVAPSPPWLARRLEAAGSRSINNV"
     gene            complement(777..1871)
                     /gene="pheS"
                     /locus_tag="VFD73_09760"
     CDS             complement(777..1871)
                     /gene="pheS"
                     /locus_tag="VFD73_09760"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HZI74290.1"
                     /translation="MQTIVTPDNPTGYADLDALLPRLQAIPALSSDALAAEIVAVLGR
                     KHGELTAALRSVPSKPVEERKAYGAAVNQLKVRFEEAFARRREALEAEQHAREQSSID
                     LTMPARHRWVGAEHPVTRVVDEIVEIFRGIGFTVAIGPEVETDWFNFIALNFPPDHPA
                     MDMHDTLYVDAPPVEGEQGGRLLLRTHTSPVQIRTLLEAPPPVRVVIPGLVYRNDPFD
                     PSHAPAFSQIEGLAVDEGISFVDLKATLVHFAHRFFTPATRVRFRPSFFPFTEPSAEM
                     DVECQLCHGSGCPACKGTGWMEILGCGMVHPAVFEHTGVDPERYTGWAFGMGPHRIAM
                     LRYGIPDIRLLYDGDMRFLQQFVNDTPGDA"
     gene            complement(1950..2309)
                     /gene="rplT"
                     /locus_tag="VFD73_09765"
     CDS             complement(1950..2309)
                     /gene="rplT"
                     /locus_tag="VFD73_09765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HZI74291.1"
                     /translation="MPRVKSGVAHHARKKKIMEAAKGARGGRSKLYKAAKETAERAMR
                     YAYRDRRKKKSEFRALWITRINAAARSQGMSYSRFMAGLRTAGVDINRKVLADLAVHD
                     ADAFGRLAELARNADQK"
     gene            complement(2319..2513)
                     /gene="rpmI"
                     /locus_tag="VFD73_09770"
     CDS             complement(2319..2513)
                     /gene="rpmI"
                     /locus_tag="VFD73_09770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HZI74292.1"
                     /translation="MPKQKTKRAAMKRFKTTGSGKLKRWHANHSHILTKKTRKRKNRL
                     KQGDLVSSADFPRVSRLLQA"
     gene            complement(2582..>2753)
                     /gene="infC"
                     /locus_tag="VFD73_09775"
     CDS             complement(2582..>2753)
                     /gene="infC"
                     /locus_tag="VFD73_09775"
                     /inference="COORDINATES: protein motif:HMM:TIGR00168.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HZI74293.1"
                     /translation="GNKVKVTMMFRGRQMAHLELGKAVLDRVAATLADVGKIESEAKL
                     EGRNMTMVIAPK"
BASE COUNT          470 a          922 c          853 g          508 t
ORIGIN      
        1 cacgttgttg atggagcggc tgccggcggc ttccagtcgc cgagccaacc agggcggcga
       61 gggtgcgact ttgacaccgc ggagcactgc gcccagcaga cgaggacagc cctccgggtc
      121 ttcagtcccg gctctgaccc cgcccaccag cgcaacgttg ccggcgcggc ggacgggagg
      181 tacgtcgatc agtgatgcgc cgggaatggc cggtagccgg aagggaatgc cgtaggaggc
      241 agaaagctcc cgagcaatgc ctttatgccc cagcaggtcg ggacggtttg ggcctacatc
      301 cacgatcaag cggtcatcgc caagtggcag ggcgtccaac aaccgagtgc ccggagcagc
      361 gtcggtatcc agctctagga taccttcgcc atcctgcccc agccccaact cccgcgcgga
      421 gcagagcatg ccttcggacg tctcgccacg aagctttcgg ccttcgatcc gaagaccacc
      481 cgggagagtg gatccgatcg gagcaaacgg gtatttcttg cccgcagtca cgttgctggc
      541 cccacacacc acattgagtc gctcggagtt tcccccgttc accgcgcaga cccgcagtcg
      601 gtccgcgttg ggatggggcc ggacttcctc cactaatccc accacgatgt cctcgaggtc
      661 ggcgtggagt ggctgaacgc cgtcgaccgg agctcccagc atggtaaggc gctccaccag
      721 atcccgggca tcgagcggcc ggcgaagaaa atcctccagc cagcgacgag aaacattcat
      781 gcgtcgcccg gggtgtcgtt tacgaattgc tgcaggaatc tcatgtcacc gtcatagagc
      841 agtcggatgt cggggatgcc gtaccgaagc atggcgatgc ggtgcggccc catgccgaag
      901 gcccatccgg tgtaacgctc cgggtcgacg ccggtatgct cgaacactgc cggatgcacc
      961 atgccgcagc ccaggatttc catccagccc gttcccttgc acgccgggca gccgctgcca
     1021 tgacagagct gacactcgac gtccatctcc gccgaaggct cggtgaacgg gaagaacgag
     1081 ggccgaaacc gaaccctggt tgcaggcgtg aagaaccgat gggcgaagtg caccagcgtg
     1141 gccttcaagt cgacaaacga aattccctcg tccaccgcca atccctcgat ctgggagaac
     1201 gccggcgcat gcgagggatc gaatgggtca ttccggtaga ccagacccgg aatcaccacc
     1261 cggaccggag gcggtgcctc caagagggtg cgaatctgaa ccggcgaggt gtgggtgcga
     1321 agcagcagtc tcccgccctg ctcgccctcc accggtggag catccacata gagcgtatcg
     1381 tgcatgtcca tcgcggggtg gtccggcggg aaattcagcg caatgaagtt gaaccagtcg
     1441 gtttccacct ccggtccgat cgccaccgtg aagccgatcc cccggaagat ctccacgatc
     1501 tcgtcgacca cccgggtgac cgggtgctcg gcgcccaccc agcggtgccg agccggcatg
     1561 gtgagatcga tgctgctttg ctcgcgcgcg tgctgctccg cctcgagcgc ctcgcggcgt
     1621 cgggcaaacg cctcctcgaa gcggaccttc agctggttga ctgccgcgcc gtacgctttt
     1681 cgctcctcga ccggcttcga cggtaccgag cgaagcgccg ccgtcaactc gccgtgcttg
     1741 cggccgagca ccgccacaat ttcggcggcg agcgcatcgg agctgagcgc cgggattgcc
     1801 tggaggcgcg gcaacagggc gtcgaggtcg gcatatccag tcgggttgtc gggcgtcacg
     1861 atggtttgca tgggctgtaa cgttgatggg gccgcccgcc cagtgcgaac ggccccatgt
     1921 gggcggactt cgaggccacc aggtatcggc tacttctgat cggcgttccg cgccagctcc
     1981 gcgagccggc caaaggcatc ggcgtcgtgg accgcgagat cggccagcac ctttcgattg
     2041 atgtcgacgc cggctgtgcg gaggccagcc atgaagcggc tgtagctcat cccctggctg
     2101 cgagccgcgg cgttgatccg ggtgatccac aaggcgcgga actcactctt ctttttgcgc
     2161 cggtcccggt aggcgtaccg catggcacgc tccgcggtct ccttggcggc cttgtagagc
     2221 ttgctccggc caccccgagc acccttggcg gcctccatga ttttcttctt gcgggcgtga
     2281 tgggccacgc cactcttcac gcggggcata ggagttcctt acgcctggag gagccgactc
     2341 actcgcggga aatccgccga gctcaccagg tcgccctgct tgagccggtt cttccgcttg
     2401 cgcgtcttct tggtcagaat atgactgtgg ttcgcgtgcc agcgtttgag cttgccactg
     2461 ccggtggtct tgaaacgctt cattgccgcg cgtttggtct tctgcttcgg catctctact
     2521 cctcgtctca cttcgttcga ctcgggcggt accagccgcc gttcacctac cgcccatccg
     2581 gctacttggg tgcgatcacc atcgtcatat tccggccttc gagcttcgcc tcggattcaa
     2641 tcttccccac atcggccagg gtggcagcta cccggtccag caccgccttc cccagttcca
     2701 gatgggccat ctgccggccg cggaacatca tggtgacctt gaccttgttt ccg
//
LOCUS       DASRPQ010000859         1282 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1041091, whole genome shotgun sequence.
ACCESSION   DASRPQ010000859 DASRPQ010000000
VERSION     DASRPQ010000859.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1282
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1041091"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..603
                     /locus_tag="VFD73_09780"
     CDS             <1..603
                     /locus_tag="VFD73_09780"
                     /inference="COORDINATES: protein motif:HMM:NF012402.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin reductase"
                     /protein_id="HZI74294.1"
                     /translation="EDGYQAERSYSIATPPEEAPRVTLTVERLDDGEVSPYLTEELRI
                     GDKLELRGPIGGYFVWEMPMGGPLLLVAGGSGIVPLMAMLRHRAAIGSTVPTRLLYSS
                     RSFEDIIYREELTRLDEADQMLEVVHTLTRSHPPGWTGYSRRIDTDMLREVTWPPDQR
                     PLIFICGPTPFVETAAASLVSLRYEPGRIKTERFGPTGER"
     gene            603..866
                     /locus_tag="VFD73_09785"
     CDS             603..866
                     /locus_tag="VFD73_09785"
                     /inference="COORDINATES: protein motif:HMM:NF040451.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6510 family protein"
                     /protein_id="HZI74295.1"
                     /translation="MENKLDGNAAAGILQQIFPFEMTMTQITCTGCGTTMAMGALAAY
                     MHGMGTVLRCPISDTVLIRVAHIRGRYFLDMRGVRVLQISEEG"
BASE COUNT          263 a          388 c          387 g          244 t
ORIGIN      
        1 gaggacggct accaggccga gcgcagctat tcgatcgcta cgccaccgga ggaggcaccg
       61 cgcgtgacgc tcactgtcga acggctcgat gacggagagg tctcgcccta cctcaccgag
      121 gagctgcgca tcggggacaa gctggaactg cgcggcccca tcggcggcta cttcgtctgg
      181 gaaatgccga tgggtggacc tctgctgctg gtcgccgggg gatcaggcat tgtgcccttg
      241 atggccatgc tgcgccaccg ggctgccata ggcagcaccg tgccgacccg cttgctatac
      301 tcctcgcgtt cgtttgagga catcatctac cgcgaggaac tcacgcgcct ggacgaggca
      361 gaccagatgc tggaggtggt gcataccttg acccgttcac acccgcctgg ctggacgggc
      421 tattcccgcc ggatcgatac tgacatgctg cgggaggtga cctggccacc tgatcaacga
      481 cctttgatat tcatctgtgg ccccacccca ttcgtcgaaa ccgccgcagc gagtctcgtg
      541 tcactacgat acgaaccagg gcgcatcaag accgaacgat tcggaccgac aggagaaaga
      601 tgatggagaa caagctcgat ggtaatgccg ctgcgggcat cctgcaacag atcttcccct
      661 ttgaaatgac gatgacccag ataacctgta caggctgcgg caccaccatg gcgatggggg
      721 cgcttgccgc ctacatgcat ggcatgggga cggttctccg ctgccccatc agcgacacgg
      781 tgctcatccg cgtggcacac atcaggggac gctacttcct ggatatgcgg ggtgtgcgcg
      841 tcctccagat cagcgaggag ggctagccct ctttcctggt cccgctgtaa ggaagcaggt
      901 gaacaccagg caagcatccc agggcgatgc ccggtggatg gagagcgcca ggcatcagat
      961 agtcttgttt gagtagtgtt tagagaagtg ctggttgaac gcacttccca acgttcgcta
     1021 ctcatagcgc caggccgaag ccgtcgctcg ggtaccttcc gagcgacggc tgtcgctgcc
     1081 atcgatggag ggagaggccc ctccttgcga agaaggagct ctacgtatga ttacgggcta
     1141 tacaagaccg ctttacatcc tcccgttcga ccaccgcgcg tcctatatct cgggactctt
     1201 cggctggaaa gaaccgctca atggagagca gatggtgact gttgccaaca gcaagcaggt
     1261 catctatgca ggcttccagc ga
//
LOCUS       DASRPQ010000860         2082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3866371, whole genome shotgun sequence.
ACCESSION   DASRPQ010000860 DASRPQ010000000
VERSION     DASRPQ010000860.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3866371"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            180..1340
                     /locus_tag="VFD73_09790"
     CDS             180..1340
                     /locus_tag="VFD73_09790"
                     /inference="COORDINATES: protein motif:HMM:NF033577.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HZI74296.1"
                     /translation="MPWKTMDVREQRVSFVVTARRGEKTFSALCQEFGISRPTGYLWL
                     SRYRQEGLAGIAERSRRPELSPDRTPPEREAQVVALRQRYPDWGARKLQVLLRRGGME
                     LARSTIHRILLRHGLIREGDGHSPAPQRFERGGPNELWQMDFKGPLQKGDTLGPLSVL
                     DDHSRYLVVLQKVASTSGELVREHLQDGFGQCGLPEAMLMDHGIPWWSAQSAHGFTQL
                     SLWLMKQGIELHWSRIRHPQTQGKVERFHGELQRAAQRRRPLGPELQAWLDQFRWEHN
                     HVRPHQALGMETPASRWRPSPRRYDPNPPAWEYPPGSRVLKVDSDGKISLYRQHWLIS
                     RALTGERVRLLTLEQRILVYYCRTLVRELDLVRQQSTIVDRWLQDENPPPQL"
     gene            complement(1620..>2082)
                     /locus_tag="VFD73_09795"
     CDS             complement(1620..>2082)
                     /locus_tag="VFD73_09795"
                     /inference="COORDINATES: protein motif:HMM:NF015945.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PspA/IM30 family protein"
                     /protein_id="HZI74297.1"
                     /translation="ADWMRRAEKAVDKKEDDLARAALERSMSYRQMGESFQQQVADQK
                     TEVENLKGALHKLEQKLAEAQTKSDLLLAQHRRSRAVSKATDAQFRVREHDHGAGFDR
                     MKEKVVRASAVSQAKAELATDSVEDRLAALEKEDELDRLLAELKARRGVGA"
BASE COUNT          372 a          666 c          655 g          389 t
ORIGIN      
        1 gtgtgggtga gtggaaagag agcttcagct gagttattca gacgttaatt cgatcaactt
       61 ctctacgctc ccactcaagc caaaagcggt gttcggtctc atgacatcct ttacaaagtg
      121 tctctagaca tcctttacac ttccgcgcga gcgcagcgag cgcgggagca aaagcttcga
      181 tgccatggaa gacgatggat gtcagggagc agcgcgttag cttcgtagtc acggccaggc
      241 ggggggagaa aacgttcagc gccctgtgcc aggaatttgg gatatcgcgt ccgaccggct
      301 acttgtggct gtcacgctat cggcaagagg gcctggccgg cattgcggaa cgcagccgcc
      361 gaccggagtt gagtcctgat cgaacgccgc cggagcggga agcgcaggtg gtggcgctgc
      421 ggcagcgtta tccggactgg ggagcgcgca agttgcaggt gctgctgcga cggggtggca
      481 tggagctggc gcggagcacg attcatcgca tcctgctgcg ccacgggctg atccgggagg
      541 gcgacggcca cagcccggcg ccgcagcgct tcgagcgggg tgggcccaac gagctgtggc
      601 agatggactt caaaggcccg ctgcagaaag gcgacaccct cgggccgctg tcggtgctcg
      661 atgatcacag ccgctacctg gtggtcctgc agaaggtcgc cagcaccagc ggcgagttgg
      721 tgcgggagca tctgcaggac gggttcggcc agtgcgggct cccggaggcg atgttgatgg
      781 accacggcat tccttggtgg agcgcacaat ccgcacacgg gttcacccag ttatcgctgt
      841 ggctgatgaa acagggcatc gagctgcact ggagccggat ccgtcacccc cagacgcaag
      901 gcaaggtgga gcgtttccac ggcgagttgc agcgggcggc gcagcgccgc cgtccgttgg
      961 gaccggagct gcaggcttgg ttagaccagt ttcgctggga gcacaaccac gttcgcccgc
     1021 accaggcgct ggggatggag acaccggcca gtcgctggcg gccgagcccg cggcgctacg
     1081 atcccaaccc gcccgcctgg gagtatccgc ccggctcgcg ggtgctcaag gtagatagcg
     1141 acggcaagat cagcttgtac cgacagcact ggttaatcag ccgagcgctc accggggaaa
     1201 gggttcggct gttaaccctc gagcaacgga ttctggtgta ctactgccgg accctggtac
     1261 gggaactcga cctcgtccgc cagcaatcga cgattgttga tcgctggctg caggacgaaa
     1321 acccaccacc gcaactgtaa aggatgtccc gggacaccct gtaaagcatg tcgtgagact
     1381 agacaccgtt tttggcttga gtgggataac tcgcagcttc gattgagtgt ggaagccccg
     1441 gacttcagtc cggggatagc tcgccccttt tcttatgtca tccgagcgag cgcgactgag
     1501 cgcatgcgaa ggagcacgag ccgagggacc ttgcgtttta ccgcctatcg cgccccgcgt
     1561 ggcccactcc gcaaatgccc cactcaagct ggccacacgc cccgtcggtg tctccaacat
     1621 cacgccccca ctcccctcct cgccttcagc tccgccagca accgatccag ctcgtcttct
     1681 ttctccagcg ccgccagccg gtcctccacg ctgtccgtgg ccaattccgc tttggcctgg
     1741 ctcacggctg aggcgcgaac aaccttctcc ttcatgcggt cgaagccggc gccgtggtcg
     1801 tgctcccgca ctcgaaactg cgcgtccgtc gccttcgaca ccgcgcgcga gcgccgatgc
     1861 tgcgccagca gcaagtcgct cttggtctgc gcctccgcca gcttctgctc cagcttgtgc
     1921 agagcgccct tgagattctc cacctccgtc ttctggtcgg ccacctgctg ctgaaaactc
     1981 tcgcccatct gacggtagct catggaacgc tccagggcag cgcgtgccag gtcgtcttcc
     2041 tttttgtcca cggctttttc ggcgcggcgc atccagtcgg cg
//
LOCUS       DASRPQ010000861         1151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1988504, whole genome shotgun sequence.
ACCESSION   DASRPQ010000861 DASRPQ010000000
VERSION     DASRPQ010000861.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1988504"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            212..574
                     /locus_tag="VFD73_09800"
     CDS             212..574
                     /locus_tag="VFD73_09800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74298.1"
                     /translation="MAQTELLERRSAITARQARAASEIYRCWALGIMLASNAEPTGNG
                     SDPGGYTVAQLDAAKRYREIRMAVGHRLWPVVFAVSVEDFSPSRWANERGRGMHKAAA
                     VELLRLGLDMAADVIGED"
     gene            654..938
                     /locus_tag="VFD73_09805"
     CDS             654..938
                     /locus_tag="VFD73_09805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74299.1"
                     /translation="MLLISQLHSDAVDYAADLIKAGVDYQIIEWNLLNQERFAPLVSS
                     FDIEDLYDGIQNILSCADDQVEDERLRNEERAWEYERDYPEPHDVQKWER"
     gene            942..>1151
                     /locus_tag="VFD73_09810"
     CDS             942..>1151
                     /locus_tag="VFD73_09810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74300.1"
                     /translation="MARIAIKYAFIADQFEVRHYTGEDGWPAADVFSPVCVKAADGNE
                     YWLPMAQPCEDFQDTETGEWYDAYGY"
BASE COUNT          230 a          345 c          373 g          203 t
ORIGIN      
        1 ggcatgccag gatggagcag cttgagggca agctgcatcg ctgcatcaac atcctgttcg
       61 ccctggcggc ctcgatgtgg ctgaccggat tggcggccgg aatactggtg tggtggctga
      121 actgagcatg ccccacgacg aaatggcccc aggagcccgt aggaagaccg tggagcggct
      181 ttcggacggt tttggtaccc ggacaagggt tatggcccag accgaactcc tggagcgccg
      241 cagcgcgatt acggcacgtc aggcgagggc ggcctccgag atctaccgat gctgggcact
      301 cggcatcatg ctggcgtcca acgccgagcc caccggcaac ggcagcgatc ccggtggcta
      361 caccgtcgcc cagctggatg ccgccaagcg ctaccgcgag atcaggatgg cggtggggca
      421 caggctgtgg ccggtggtct tcgcggtcag cgtggaagac ttctcgccat cgcggtgggc
      481 caacgaacgc ggcaggggca tgcacaaggc cgccgctgtc gaattgctgc gcctggggct
      541 cgacatggcg gcggatgtga ttggggagga ttagcccgaa agcggcgctt tcaagattaa
      601 tattattctt ttatcgtgtg tttcggtatc aacatcgaac acacggagac gacatgctct
      661 tgatcagcca gctgcattcc gatgccgtcg actacgccgc cgacctcatc aaggccgggg
      721 tcgattacca gatcatcgag tggaacctgc tcaaccagga gcgcttcgct ccgctggttt
      781 catccttcga catcgaagac ctctacgacg gcatccagaa catcctgtcc tgcgccgacg
      841 accaggtgga ggacgagcgc ctgcgcaacg aggagcgcgc ctgggagtac gagcgggatt
      901 atcccgagcc gcacgacgtc cagaagtggg agcgctgagc catggcacgc atcgctatca
      961 agtacgcttt catcgctgat cagttcgagg tccgtcacta caccggagag gacgggtggc
     1021 cagcagccga cgtgttcagc ccggtgtgcg tcaaggccgc cgatggcaac gaatactggc
     1081 tgcccatggc gcagccctgc gaagacttcc aggacaccga aaccggcgag tggtacgacg
     1141 cttacggcta t
//
LOCUS       DASRPQ010000862         1260 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3866562, whole genome shotgun sequence.
ACCESSION   DASRPQ010000862 DASRPQ010000000
VERSION     DASRPQ010000862.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1260
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3866562"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(52..840)
                     /gene="tenA"
                     /locus_tag="VFD73_09815"
     CDS             complement(52..840)
                     /gene="tenA"
                     /locus_tag="VFD73_09815"
                     /inference="COORDINATES: protein motif:HMM:NF015057.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050334 - thiaminase activity [Evidence
                     IEA];
                     GO_process: GO:0006772 - thiamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HZI74301.1"
                     /translation="MNKDDFSTPAAAGEPSLSAELRDHSDRIWNGLHAHPFLSELARG
                     VLPLEKFRFFLEQDIMYLPDFARCIAMGAAKSATEAELGFFVRQLDGTINLELPNQYR
                     VLDQVCRLGAADHGGALGKAPANVAYTSFMLSVAGQGGPLEIMAAILPCAWSYAEIAG
                     RLADQIADHPVYRDWVSFYTTDEVLGLVRQMRQSFDEMAVQAGPGPQTRRRLTEIFTT
                     SSRLEGAFWEMAYTLDQWPDLSGGQGLPPGSARGSRAAASALTR"
BASE COUNT          225 a          421 c          398 g          216 t
ORIGIN      
        1 tgagatctga gatcttatac atcagatttt atggatcgta acaacggtga tctacctggt
       61 caaggcgctg gcggcggccc ggctgccacg ggcgctcccc ggcggcagcc cctggccgcc
      121 ggagagatcc ggccactggt caagcgtgta ggccatctcc cagaacgccc cctccagccg
      181 tgaactggtg gtgaagatct ctgtcaggcg tcgccgggtt tgcggccccg gacccgcctg
      241 cacggccatc tcgtcgaagc tctgcctcat ctgacggacc agcccgagca cctcgtccgt
      301 ggtgtagaaa ctgacccaat cgcggtacac aggatgatcg gcgatctgat ccgccagacg
      361 gcctgcgatc tcggcgtagc tccaggcaca cggcaagatg gcagccatga tctcgagcgg
      421 gccaccctgc ccggccacgc tcagcataaa gctggtgtag gcgacgttgg ccggggcctt
      481 gccgagcgcc ccgccgtggt ccgcggcacc cagccggcac acctggtcca ggacccggta
      541 ctggttcggt agctccaggt tgatggtgcc gtcgagttgc ctgacgaaga atccgagttc
      601 ggcctcggtt gcggacttcg ctgcccccat ggcgatgcag cgcgcgaaat cgggcaggta
      661 catgatgtcc tgctcgagaa agaaccggaa cttctccagc ggcagcaccc cccgagcgag
      721 ctcgctcagg aaggggtgcg catgcaggcc gttccagatc cggtcgctgt gatcgcggag
      781 ttcggccgac agcgagggct cccctgcggc agccggggtg ctgaagtcgt ccttgttcat
      841 ggttgctgaa ctccccttcc aacgccccag ctggggaggc tcacgccaaa cgcccgccgc
      901 tgatcagccg ttgccccgtg gcaaccatgc atggtgtcgt ctgcgcaaac gcgaccgccg
      961 gggcatctcc ctcggcatat cagctcaaga ggacctgact ggaccagata tacggtattt
     1021 cgtatatcct cctccggtca atatcggccg cccgcagact aagcgcttcc ggcgaccacc
     1081 cggacggaga ctgagccgcg ggctatcaga tgaaggattc ccgtttcccg gtcggctcca
     1141 cccatccaga ctcaggggag accgccggag atcctcgcct gcccgggaag atccgggccc
     1201 ggcctaggcc aacacagcgt gggtgtggcg gcgcctggcg ggcaggagac atgggaaagt
//
LOCUS       DASRPQ010000863         1407 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2295783, whole genome shotgun sequence.
ACCESSION   DASRPQ010000863 DASRPQ010000000
VERSION     DASRPQ010000863.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1407
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2295783"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            168..1334
                     /gene="solA"
                     /locus_tag="VFD73_09820"
     CDS             168..1334
                     /gene="solA"
                     /locus_tag="VFD73_09820"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: protein motif:HMM:NF008425.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050131 - N-methyl-L-amino-acid oxidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HZI74302.1"
                     /translation="MKRDYEYVVLGLGGFGSAAAYWLGRRAGGEVLGLEQFELGHVRG
                     ESQDHSRIIRLSYHTPEYVELAKHAYQAWSDVERDSGEQLILRTGGLDFAGRVSAIPL
                     SNYSNSMAAAGVPYETLDAREIMRRWPPFRLSDDVQGLFQPESGIAMAAKANATHQRM
                     ARNYGAQLLERVQVGDITTHAGEIHLQVDGATYRCRRLVISVGAWSNQVLLSFGARLP
                     LTVTQEQVTYFATPHLADFQPDRFPIWIWMDDPCFYGFPAFGEPGVKAGQDAGGQEVT
                     ATTRSFEPDQPALQRVIGFLRDRIPTALGPILYTRTCLYTLTPDRDFVIDRVPDHPEA
                     LIAIGGGHGFKFASLIGRILSELAIDGQTRHNLETFRMDRAILQLRDPPKHYMV"
BASE COUNT          261 a          440 c          435 g          271 t
ORIGIN      
        1 cttctgggat cgaatcaacc ggcaagactg ggcgatttgc gagaacgtgc aacgaggtat
       61 gagatctcga gtcttcggcc acggctacta cgctccgatg gagaacgcca gtctggatat
      121 ccgtcgatac atcgaagaaa aactcggacc cgcgaattga tgccgtcgtg aagcgcgact
      181 acgagtacgt tgtcctcggg ctcgggggat ttgggagtgc ggccgcatac tggctggggc
      241 gaagggccgg gggcgaggtt ttgggcctgg agcaattcga gctgggacac gtgcgcggcg
      301 agtcacagga tcactctcgc atcatccgcc tctcgtatca caccccggag tacgtggagc
      361 tggccaagca cgcctaccag gcctggtccg acgtggagcg cgactccgga gagcagctga
      421 ttctccgaac cggtggactc gactttgcgg gacgagtcag cgccataccc ctcagcaact
      481 actcgaacag tatggcggcc gcgggtgtgc cgtacgagac gctcgatgcc cgggagatca
      541 tgcgccggtg gccgcccttt cggctgagcg atgatgtcca gggtctattc caaccggaga
      601 gtggcattgc catggcggcc aaggccaacg ccactcacca gcggatggcc cgcaactacg
      661 gcgctcagct gctcgagcga gtacaggtcg gcgacatcac cacgcacgcg ggagagatcc
      721 acctccaggt ggacggtgcg acctatcgct gtcgccggct cgtcatttcg gtgggggcct
      781 ggtccaacca ggttctgcta tcgttcggag ctcgacttcc actgactgtc acccaggagc
      841 aggtgacata ttttgccaca ccgcatcttg ccgacttcca gccggaccgg tttccgatct
      901 ggatctggat ggatgacccc tgcttctacg gctttccggc ctttggagaa ccgggtgtca
      961 aagcggggca ggatgccggt ggtcaggagg tgactgctac tacgagaagc tttgaaccgg
     1021 atcagcccgc actccagcgg gtgatcggat ttctccgtga tcgcattccc actgcgctcg
     1081 gcccgattct ctacacccgg acttgccttt atacgttgac cccggaccgc gacttcgtga
     1141 tcgaccgagt tccggaccac ccggaggccc tgatcgcgat cgggggcggc catggcttca
     1201 agttcgcttc gctgatcggg cggatcctgt ccgagcttgc catcgacggg cagacgcggc
     1261 acaacctcga aaccttccga atggatcgcg cgatccttca gctccgggac ccacccaagc
     1321 actacatggt gtgacggtct ccaccgaccg tccgatcgag ccgcccgcga cgctgcatcg
     1381 ggtcatgggc tttcgagacc tgctcct
//
LOCUS       DASRPQ010000864         1007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2621270, whole genome shotgun sequence.
ACCESSION   DASRPQ010000864 DASRPQ010000000
VERSION     DASRPQ010000864.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2621270"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            221..574
                     /locus_tag="VFD73_09825"
     CDS             221..574
                     /locus_tag="VFD73_09825"
                     /inference="COORDINATES: protein motif:HMM:NF012717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HZI74303.1"
                     /translation="MAGYLPVVIYLGLIVAFGVVSLGMAYVLRPARPYWSKLENYECG
                     AEPIGEAWVQFPVGFYLVALIFIVFDALAVFLFPWALVLRSFGLWALATMGLFLGILS
                     LGWMYAYKEGILEWK"
     gene            565..>1007
                     /gene="nuoB"
                     /locus_tag="VFD73_09830"
     CDS             565..>1007
                     /gene="nuoB"
                     /locus_tag="VFD73_09830"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF005012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HZI74304.1"
                     /translation="MEIKAPTPQIPPAVWTEFKDLQEWEKYRQERPEGDKHSELFESA
                     TEGVYNFPGGFVATGVVDAVLNWARKSSVWPVTFGLACCAIEMMATFASRFDVERLGM
                     VPWASPRHSDLMIVSGTVTIKMAPMLKRIYDQMPDPKWAVSMGSCA"
BASE COUNT          152 a          296 c          351 g          208 t
ORIGIN      
        1 agtgacgtca cgtctgcact ttaaaatcaa cgagttgatc gctaaaatgg gggctctcgg
       61 cgccccggag tgtcactttt gcgtaagggg ttgacgcttt gaaggaacac atctttgcgt
      121 ggttgctcac tccactcctg acgaggctgg cggtggtcgg accgggcggc agggtgtgtt
      181 atactccgcg gggtttggag tcattcaggg aggcaagcct gtggcagggt atctgccggt
      241 cgtcatctat ctggggctga tcgtcgcgtt cggcgtggtg tccctcggca tggcctacgt
      301 cctgcggccc gcccggccgt actggagcaa gctcgagaac tacgagtgcg gcgccgagcc
      361 catcggcgaa gcctgggtgc agttcccggt gggcttctac ctggtcgcgc tcatcttcat
      421 cgtgttcgac gcgctggcgg tgttcctctt cccgtgggcg ctggtgctgc ggagcttcgg
      481 gctctgggcg ctggccacca tgggcctctt cctgggcatc ctctcgctgg gctggatgta
      541 cgcgtacaag gaggggatcc tcgaatggaa ataaaggcgc cgactccgca gattccgccc
      601 gcggtctgga cggagttcaa ggatttgcag gagtgggaga agtaccgtca ggagcgcccg
      661 gagggcgaca agcactccga gctgttcgag agcgccaccg agggcgtcta caacttcccg
      721 ggcggcttcg tggccaccgg cgtggtggac gcggtgctca actgggcgcg caagtcctcg
      781 gtgtggccgg tgacgttcgg gctggcctgc tgcgcgatcg agatgatggc gacgttcgcc
      841 tcgcgcttcg acgtggagcg cctgggcatg gtgccgtggg cctccccacg gcactccgac
      901 ctcatgatcg tctcgggcac cgtcaccatc aagatggcgc cgatgctcaa gcgcatctac
      961 gaccagatgc cggatcccaa gtgggcggtg tcgatggggt cctgcgc
//
LOCUS       DASRPQ010000865         2004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2296304, whole genome shotgun sequence.
ACCESSION   DASRPQ010000865 DASRPQ010000000
VERSION     DASRPQ010000865.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2004
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2296304"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1111
                     /locus_tag="VFD73_09835"
     CDS             <1..1111
                     /locus_tag="VFD73_09835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HZI74305.1"
                     /translation="FVNNINTHEGGTHLTGFKSALTRTINDVAKRRDFLKKEDFTLSG
                     EDIREGLTCVLHVKVREPQFEGQTKTKLGNSEVEGIVKAVVNEHLGSYLEEHPPVARA
                     IIEKAVSAARAREAARKARDLVRKKSGLENAVLPGKLADCSIDDPAVSEIYLVEGDSA
                     GGSAKQGRDRSFQAILPLRGKILNVERARIDKILSNEEIRSMITAIGTGVKDDFKLED
                     ARYHKIILMTDADVDGAHIRTLLLTFFFRQMQELVEAGYVYIAQPPLYRVAKGKDEYY
                     AYSEQERDDYTKRLTNGDGKGTVNIQRYKGLGEMNPDQLWKTTMDPATRTILRVTMED
                     AATASQLFDELMGDEVEPRRLFIERNAKYVSNLDV"
     gene            complement(1117..>2004)
                     /locus_tag="VFD73_09840"
     CDS             complement(1117..>2004)
                     /locus_tag="VFD73_09840"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HZI74306.1"
                     /translation="TPLLRLEVPDLPSEVWLKLENLQPIGSFKIRGGGYAMLSTPRSQ
                     LERGVYTASAGNMAQGVAYLARKLGVACTVIVPDHAPDTKLRAIERLEARILKVPFDR
                     WWQTMLEHEYPGMDAVFIHPVADPRVLTGNGTVGLEILEDLPDVDTVLVPYGGGGLSS
                     GIASALRASGSAAKVYGCEVETAAPLRASLVAGRAVTCDYTPSFVDGIGGKSVLAEMW
                     PLVSALLDGALSVTLDQVASTIRLLVQRVRVVAEGAGAASVAAALQGVAGGRKVVCVV
                     SGGNIDPTKLAAILLGETP"
BASE COUNT          421 a          637 c          627 g          319 t
ORIGIN      
        1 cttcgtgaac aacatcaaca cccacgaagg cgggacgcac ctgaccggct tcaagagcgc
       61 cctgacccgg accatcaatg acgtggcaaa gcgccgcgac ttcctgaaga aggaggattt
      121 cacgctgtcc ggtgaggaca ttcgtgaagg gctcacttgc gtgctgcacg tgaaggtccg
      181 ggagccgcag ttcgaagggc agaccaagac caaattggga aattccgagg tcgagggcat
      241 cgtcaaggcg gtggtgaacg agcacctcgg cagctatctc gaggagcacc cgccggtcgc
      301 gcgcgccatc atcgagaagg cagtgagtgc cgcgcgggcc cgcgaggctg cgcggaaggc
      361 ccgcgatctc gttcgcaaga agtccggact ggagaacgca gtgctgcccg gcaagctggc
      421 cgactgctcc atcgacgacc cggcggtcag cgagatctac ctggtagagg gagattccgc
      481 cggtggcagt gccaagcagg gccgcgaccg ttccttccag gcgatccttc cgctccgcgg
      541 caagatcctg aacgtcgagc gcgcccggat cgataagatc ctgagcaacg aagaaattcg
      601 ctcgatgatc accgcgatag gcaccggggt gaaggacgat ttcaagctgg aggacgcccg
      661 ctaccacaag atcatcctga tgaccgacgc ggacgtcgac ggcgcccaca tcaggacgct
      721 gctcctcacc ttcttcttcc ggcagatgca ggagctggtg gaggcgggtt acgtctacat
      781 cgcccagcca cctctgtatc gggtggccaa ggggaaggac gagtactacg cctatagcga
      841 gcaggagcgg gacgattata ccaagcggct gaccaacggc gacggcaagg gcaccgtgaa
      901 tattcagcgc tataagggac tgggagagat gaaccccgac cagctctgga agaccacgat
      961 ggatcccgcc acgcgaacga tcctgcgagt gaccatggag gatgcggcca ctgcgtcaca
     1021 gctcttcgac gagctcatgg gtgacgaggt cgagcctcgg cggctgttca ttgagcgcaa
     1081 cgcgaagtac gtgagcaatc tggacgtcta ggacggtcaa ggcgtctcgc cgaggaggat
     1141 cgcggcgagc tttgtcggat cgatgttgcc gccggacacg acgcagacaa ccttacgacc
     1201 gcctgccacg ccctggagcg ccgcagcgac cgatgccgct ccggcgcctt ccgccaccac
     1261 ccgcacccgc tgcaccaaca gacgtatcgt gcttgccacc tgatcgaggg tgaccgaaag
     1321 ggctccgtcc agtaacgcgc tcaccagcgg ccacatctcg gccaggacgc tcttgccacc
     1381 gatcccatcc acaaaactcg gcgtgtagtc acaggtcacc gctctccccg cgacaagcga
     1441 agcgcggagt ggcgccgcgg tctcgacttc gcagccgtac accttggcag cagagcctga
     1501 cgcccgtaga gccgacgcaa tgccgctgga caggcctccc cctccgtagg gcacgaggac
     1561 ggtgtcgaca tcgggaaggt cctccaaaat ttccagacct accgtaccat tgccggtcaa
     1621 gacccggggg tctgcaaccg ggtggataaa gacggcatcc attccggggt actcatgttc
     1681 cagcatggtt tgccaccacc ggtcgaacgg aaccttgagg atgcgagcct ccagacgctc
     1741 gatcgcccgc agcttggtgt cgggtgcatg gtcgggaacg atgaccgtgc aagccacacc
     1801 cagcttgcgc gccaggtaag ccactccctg cgccatgttg ccggcgctgg cggtgtaaac
     1861 gccacgctcc agttgagaac gcggcgtgct caacatcgcg tagcctccgc cccggatctt
     1921 gaacgatccg atcggctgga ggttttccag tttgagccac acttcggagg gtaggtcggg
     1981 aacttccagc cggagcagcg gggt
//
LOCUS       DASRPQ010000866         2228 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3867254, whole genome shotgun sequence.
ACCESSION   DASRPQ010000866 DASRPQ010000000
VERSION     DASRPQ010000866.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2228
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3867254"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            191..445
                     /locus_tag="VFD73_09845"
     CDS             191..445
                     /locus_tag="VFD73_09845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74307.1"
                     /translation="MDDLPQRFVIRESRHRIHNPFTTEKLATLGRALYLSPGASVLDL
                     ACGSREMLCTWARDHRLTGTGVGLADVLGVDPGTIRRGRQ"
     gene            1177..1731
                     /locus_tag="VFD73_09850"
     CDS             1177..1731
                     /locus_tag="VFD73_09850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74308.1"
                     /translation="MYDAYFAAMATAAAALIGLLFVAVSVRDDTIFGPKAMPGGEALA
                     VTAFIGLVSSFVVSLLGLIPKVNIGEPAVVMAVIGIVAMVRLQRRLHVGRNLIVLAIT
                     LLAYAAQLGFGVLLLADPHSDQLVNLSVIVFVPLIVSLQRAWSLLKGKHLAGARGAAV
                     TGDHDPPHVPDRGRFWLQRRRGPR"
BASE COUNT          352 a          702 c          735 g          439 t
ORIGIN      
        1 acggcctgaa gaagatccag taccggcccg gcctcatcga aggctgcctc gccggaacag
       61 ggctgaccct ggacccggct gaacaaccaa cggacatcac gaattaatga cctttaacag
      121 ggatgcaccg cgtacggccg aaccgctagg ttcagccctc tggccacacc taatcgaagg
      181 atcgaccggt atggatgatc ttccccagag atttgtgatc cgggagagcc gccaccgcat
      241 tcataacccg ttcaccactg aaaagctggc taccctgggg cgcgcgttgt atctgtcacc
      301 cggagcaagc gtgctcgacc ttgcctgcgg gtccagggag atgctgtgca cctgggcgcg
      361 cgaccatcgg ctgactggca ccggggttgg tctggccgat gtcctcggcg tcgatccggg
      421 caccatacgg cgtggacggc agtagcgcac gcacgatggt tgacttgcca gcgccttcct
      481 tcccgctgat gatgatgagc cgttgctccg atgaggcggg ctgcggtgaa ggggacacgc
      541 agcgagtatg actgacaccc tggaggcgaa tcctgctcgt cccccgtttt cctcgtaggc
      601 gccgaatcac ttgtgagtgg tcgctgggtc tagggcggcg gaccgatcgc gcgtgacggc
      661 ccggagggcc gccctagacg cggtggccgc ggactggaca cccacgtggc cacgctccag
      721 atgaaggacg cgagcgagcg gatgagcgag gcactgtggg gccagggatg agcgtaactg
      781 caaccttcgg ctgcctcgtg agtgaggccc tgtccctgcg agtttcggga gagggcctgc
      841 gagctgcgga ggatcgggga tttgaacccc ggagggtggt tacatccaac cgcattagca
      901 gctcggggca cagcggtcca gatccgttca tgctggacca aggtacttga tcggcccctc
      961 atggaccatg ccgtacggcg ttgaactgca acccaaactg caacctcaca gttcggtggc
     1021 tcccatctga tgacagcgtg gcaccctggt ccccgtcacc atctcccggc ccgtctccgg
     1081 caattgcgcc agagcccatg atgcggcaag cggcagcgtc cacccggttg acatcacaga
     1141 tcggccatgc cagcttctgt tcgcatggtg cctggtgtgt acgacgccta ctttgccgcg
     1201 atggctacgg cggcggcggc actcatcggc ctgttgtttg tggctgtctc ggtccgggac
     1261 gacacgatct tcgggccgaa ggccatgccg ggcggtgaag cgctggcggt cactgctttc
     1321 atcggcctgg tgagttcgtt cgtggtgtcc ttgctcgggc ttatccccaa ggtcaacatc
     1381 ggcgagcccg ccgtggtcat ggccgtgatc ggcatcgtcg cgatggtcag gctgcagcgt
     1441 cggctgcacg ttggcaggaa cctgattgtg ctggccatca cgttgcttgc ctacgcggcc
     1501 cagctcgggt tcggtgtgct gctgctggct gatccgcaca gcgatcaact ggtcaacctg
     1561 tcggtcatcg tgttcgtccc gctgattgtg tcgctgcagc gcgcgtggtc gctgctcaag
     1621 gggaagcacc tggctggcgc gcgcggcgcc gcggtgaccg gggatcacga tccgccgcac
     1681 gtgcccgacc ggggacgctt ctggctgcaa aggcggcgtg ggccgcgcta ggtgagctgt
     1741 gttgtcagtg gagaccacca tggcatcgac gccacgtgcg gctccggatg cctgccgggt
     1801 cgagccgttc tccaatggcc acgacatctt cgggcaatgc ctgggtcttg ggcttcatga
     1861 ccggcttgga agatcggtgg cgtggtccag tacggcctct gtgataaggc ccggtcctac
     1921 tcggggcccg gagggaagac gcggtggtga ccgtgtttga ccgtcggtcg ccgacgtgtg
     1981 tggcacgtat gtggcatggt cggcaccttc tgacccgtag attcctgtac ctgcatccgg
     2041 acctgttcag tgccgttcgc ggcctcgggc ttgtcaattc gcgttgtcca tgcgggtccg
     2101 aagcagtaga aggttgttta tccccgtggc tcccagcgtg gctcccggct gacgacagcg
     2161 tgacgccctg gtcccgccgc catctcccgg cctgcttccg gcaacccggc cgcgccccgt
     2221 cctgtccc
//
LOCUS       DASRPQ010000867         1568 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2296434, whole genome shotgun sequence.
ACCESSION   DASRPQ010000867 DASRPQ010000000
VERSION     DASRPQ010000867.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2296434"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..696)
                     /locus_tag="VFD73_09855"
     CDS             complement(<1..696)
                     /locus_tag="VFD73_09855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74309.1"
                     /translation="MTSTTQTEHVTCLGCGCGCDDLTVQVSEGRIVNVTAACPIGRTW
                     LGNGVVPANVLRNGQPSTLSDAIADAARTLTEAAGRCLVYLGTDINSQTQRAALEIAD
                     MLRARVETPTSAAAADGLLAAQRRGRAAATLGEIRNRADAILFWGVDPAQRYPRFAAQ
                     CGLNVGEMQPTRIVRDRVIIGVGIGSDLTISGADQILTLRPEEEITALSFMRASVLGR
                     SVTATSPAVGQAVD"
     gene            complement(693..>1568)
                     /locus_tag="VFD73_09860"
     CDS             complement(693..>1568)
                     /locus_tag="VFD73_09860"
                     /inference="COORDINATES: protein motif:HMM:NF014686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HZI74310.1"
                     /translation="LLGNPPRVLERVRNPLELSRVLRRHALPAPLSRKSAPAEAGDSS
                     VRWLLKSRRSGGGNGVQAWRPGTPVPRGRYLQERISGAPGSLIMACNGKSAVVLGLTR
                     QLVGEPELGARDFQYCGSLLLRCAGPGFPCQDELFRRCGDLANVVAREFELVGLNGID
                     FIADQNTPYLIEVNPRFSASMELVQRAQGISMFDVHFEACHGRLPLITPPTPKTYGKA
                     IVFARRSVTVPPASLWEAVDLADLPHPEERIEKGHPICTVFAEAQTPQRCREQLLERA
                     AAVYRCVERRLKRAS"
BASE COUNT          301 a          494 c          493 g          280 t
ORIGIN      
        1 gtcgactgcc tgcccgactg ctggcgacgt cgctgtgacg ctcctaccca ggactgaagc
       61 acgcatgaac gagagagcgg tgatctcctc ttccggtcgc aacgtgagga tctggtctgc
      121 gccggaaatc gtcaaatcgg atccaatgcc caccccgatg atcacgcggt cccgcacgat
      181 gcgggtcggc tgcatctcgc caacattcag tccgcattgt gccgcaaacc gcggatagcg
      241 ctgagctggg tcaactcccc aaaacaggat tgcgtctgcc cggtttctga tctcgccgag
      301 ggtggctgcc gcgcggcccc gccgctgggc tgccagcagt ccatccgccg ctgccgctga
      361 cgtcggggtc tccactctgg ccctgagcat gtcagcaatc tcgagcgcgg ctcgctgggt
      421 ctgagagttg atgtcggtgc ccaggtacac gagacaccgt ccggcagcct cggtgagcgt
      481 acgggcggca tcggcgatcg cgtcagacag ggttgatggc tgaccatttc ggaggacatt
      541 tgccgggaca acaccattgc ccaaccacgt ccggccgatc gggcacgccg ccgtcacgtt
      601 gacgatccgg ccttcgctga cctgaacggt gaggtcgtca cagccacaac cgcacccgag
      661 gcaggtaacg tgctcggtct gagtcgtcga ggtcatgacg cgcgtttcaa acgacgttcg
      721 acacagcggt acactgccgc cgctctctca agcaactgct cacggcagcg ctggggagtc
      781 tgggcctcgg cgaagacggt gcagatgggg tgccccttct cgatgcgctc ttcaggatgg
      841 gggagatcgg cgaggtcgac agcttcccag agactggcgg gcggcaccgt cacggaacgc
      901 cgggcaaaca cgatggcctt tccatatgtc tttggcgtcg gaggagtgat gagcggcaaa
      961 cgtccgtggc atgcctcgaa gtggacgtca aacatggaaa ttccttgtgc ccgctgaacc
     1021 agctccattg aggcggagaa tcgagggttc acttcgatca agtagggagt gttttgatca
     1081 gcgatgaaat cgatgccatt gaggccgacc agctcgaatt ctcgggctac cacgtttgcc
     1141 agatcgccgc agcgccggaa caactcatcc tggcagggaa agcccggtcc agcgcagcgc
     1201 agaagaaggc ttccgcaata ctgaaagtcc cgggccccca gttccggctc gcctaccagt
     1261 tggcgggtga gtccaagcac gacggcggac tttccattac atgccatgat gagcgagccg
     1321 ggagctccgg atatccgctc ttgcaggtac ctcccgcgtg gaaccggggt accaggtcgc
     1381 catgcctgaa cgccgttccc acctccggac cgacgcgact tgaggagcca gcgaacggag
     1441 gagtcaccgg cttcagcggg ggcgcttttt cgactcagcg gcgcgggcag cgcatgacgg
     1501 cgaagcaccc ggctcagctc cagaggattt cttacccgct ccaggacgcg aggaggattt
     1561 cccagaag
//
LOCUS       DASRPQ010000868         1101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3549022, whole genome shotgun sequence.
ACCESSION   DASRPQ010000868 DASRPQ010000000
VERSION     DASRPQ010000868.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3549022"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1101
                     /locus_tag="VFD73_09865"
     CDS             <1..>1101
                     /locus_tag="VFD73_09865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase-associated DEXH box helicase"
                     /protein_id="HZI74311.1"
                     /translation="LLQEVRTARSYRDLSDGEWRWVMDFVTHGGSALSAYPEYNKLTE
                     RNGCFFPRDRMVAMRHRMSIGTIVSEAAMKVRFVRGKTIGTVEENFIARLRPGDVFTF
                     AGRTLKFVRVRDMTAWVRLASEPTSVVPHWTGARLALSPELAESVRRKLDEARQGRYD
                     AAEMQAIRPILELQAKWSCIPAADEFLIERVQTREGHHLFFYPVEGRLVHEGLAALFA
                     YRLAQLGPITFTLAANDYGFELLSAEPARLEEAIEAGLTAPGHLLHDIPASLNAAELA
                     KRQFREIARVAGLIFQGYPGNQRSVKHVQASSGLLYDVFARYDPENLLLFQAHREVLE
                     KQLEQSRLGRTLERLSAGRISIRDVQRPTPLAF"
BASE COUNT          202 a          329 c          356 g          214 t
ORIGIN      
        1 ctcctgcagg aagtgcgcac cgcccgatcg tatcgtgatc tgagcgatgg agagtggcgc
       61 tgggtgatgg atttcgtgac tcacggaggc tcggctctga gtgcctaccc cgaatacaac
      121 aagctgaccg agcgaaacgg ctgtttcttc ccccgggacc ggatggtcgc gatgcgtcac
      181 cggatgtcga tcgggaccat cgtcagcgag gcggcgatga aggttcggtt cgtccgaggc
      241 aagacgatcg ggaccgtgga ggaaaacttc atcgcccggt tgcgaccggg tgatgtgttc
      301 acctttgccg gccgcaccct gaagttcgtg cgagtccggg acatgaccgc ctgggtcagg
      361 cttgcctcgg agcctacctc ggtggtcccc cactggaccg gggcccggct ggcgctctcg
      421 ccggagctgg cagaatcggt tcgccgcaag ctggatgagg cgcgacaggg cagatatgac
      481 gcggccgaga tgcaggcaat ccgtccgatc ctcgagctcc aggccaagtg gtcctgcatt
      541 ccggctgccg atgaatttct gatcgagcgg gtgcaaaccc gggagggcca ccatctgttc
      601 ttctatccgg tggaggggcg gctggtccac gaaggtctcg cggctctgtt tgcctatcga
      661 ctggcacagc tcggaccgat taccttcact ctcgccgcaa acgactatgg ttttgagctg
      721 ctctcggcgg agccggccag gctggaagaa gcaatcgaag ctggcctcac cgcacctggg
      781 catctgctgc acgatattcc ggccagtctg aatgcagccg agctggccaa acggcaattt
      841 cgggagatcg cgcgggtggc gggtctgatc ttccaagggt atccaggtaa ccagcgaagt
      901 gtgaaacacg ttcaggcctc gagcggcctt ttgtacgacg tgtttgcccg gtacgatccc
      961 gaaaacctgc ttctctttca ggcgcaccgg gaagtcctgg agaaacagct ggagcagagt
     1021 cggctgggtc gaacgctcga gcgactatcc gcaggtcgca tcagcattcg cgacgtgcag
     1081 cggcccactc cgctcgcatt c
//
LOCUS       DASRPQ010000869         1496 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2622323, whole genome shotgun sequence.
ACCESSION   DASRPQ010000869 DASRPQ010000000
VERSION     DASRPQ010000869.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1496
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2622323"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            556..1224
                     /locus_tag="VFD73_09870"
     CDS             556..1224
                     /locus_tag="VFD73_09870"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HZI74312.1"
                     /translation="MEQLKGPDRPGRPIYSISAVARMIGVPVSTLRTWEERYKLVVPE
                     RNASGHRLYSRDQVEQLEFVKTSMATGVSAADAYRLLAERTEGSFPGSEPHTRLLILL
                     ADRDPYSAGYQEYFLRTEGFEVEVTLDVGAASRSFREHSPSLVVVDLLISGGTGLDLI
                     RFFKERDEVPVIAISVLASRDQALVAGADAFLAKPTDPLYLVSTVRDLLGSSAFLAGP
                     KSVR"
     gene            1221..>1496
                     /locus_tag="VFD73_09875"
     CDS             1221..>1496
                     /locus_tag="VFD73_09875"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HZI74313.1"
                     /translation="MTSRLHSGNDRLDEVLGGGLPGNGISLIAGLPGAGKTIVAQQYV
                     FRNASPDRPGVYLSTVSEPLEKIVRFGQTLDFFDMAAIGTSVFYEDLG"
BASE COUNT          258 a          474 c          466 g          298 t
ORIGIN      
        1 agagaatgac gacgattcac cttcatcact gcccgcgggc ccagtcccgg ccccggctgg
       61 cagcggacgt tgttaaggtt cccgggtgcc gtaaatatcc cgtcatagag actcgcggaa
      121 tcctatataa tcatttcgtt attacgtagg caaggggtat gaccagattt cgcggatcgg
      181 atccgatctt ctttgccgga agcgagatca ggtggtgaat aggtccgaat agcggttgcg
      241 tggaatttga gcagcgtccg cgcaggattc gtgcctgaca tctgcccggt gtcatttccg
      301 tcgaagaatt gttgagcatc atgaacggta agccgcttac tacataatgg aatgggaccg
      361 atcgtccggc caaggcgctg gtctcggctc gctgccgcgg ccaggtcccg ccgccttggt
      421 ctcgtccggt cctcacctgg ctgttgcgtc cggccggtgt aggctttgac cagcatttcc
      481 ggttgccgcg ccagcgcact gatctccagg atgcgtaagc ccggttgccc agcgaggagt
      541 agatgagtaa atagggtgga gcagctgaag gggccggacc gacccggacg cccgatctac
      601 agcatcagcg ccgtggcgcg aatgatcgga gtgcccgtat cgaccctccg cacatgggag
      661 gagcgctaca agctcgtggt ccccgagcgg aacgcgagcg gccaccgcct ctacagccgc
      721 gaccaggtgg agcagctcga gttcgtcaag acctcgatgg cgaccggcgt cagcgcggcc
      781 gatgcttatc ggctgctggc cgagcggacc gagggctcct tccccggctc tgagccgcac
      841 acccggttgc tcatcctcct cgcagaccgc gatccgtatt ccgccgggta ccaggagtac
      901 ttcctgcgga cggaaggctt cgaggtcgag gtgaccctcg acgtgggtgc ggccagcaga
      961 tccttccgcg agcattctcc ttcgctggtt gtcgtagatc tcctcatctc cggcggtacc
     1021 ggcctggacc tgatccgttt cttcaaggag cgcgatgagg tcccggtcat cgccatttca
     1081 gtgctggcgt cgcgcgacca ggccctcgtc gcaggagcgg acgcgttcct ggccaagccg
     1141 actgatccct tgtacctcgt gtccaccgtc agggacctac tggggtcgag cgccttcctc
     1201 gctggtccga aatccgtccg gtgaccagcc ggctgcacag cgggaacgat cgcctcgacg
     1261 aggtgctcgg cggaggtctc cccggcaacg gcatcagcct catcgccggg ctgcccggcg
     1321 ccggcaagac gatcgtggcc cagcagtacg tcttccggaa cgccagcccg gatcgtcctg
     1381 gtgtctactt gtccacggtc tccgaaccgc tggagaaaat agttcgcttc ggccagaccc
     1441 tggatttctt cgacatggcc gcgatcggca catcggtctt ctacgaggat ctgggg
//
LOCUS       DASRPQ010000870         1322 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1990166, whole genome shotgun sequence.
ACCESSION   DASRPQ010000870 DASRPQ010000000
VERSION     DASRPQ010000870.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1990166"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1169..1269
                     /locus_tag="VFD73_09880"
     tRNA            1169..1269
                     /locus_tag="VFD73_09880"
                     /product="tRNA-OTHER"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
BASE COUNT          259 a          491 c          380 g          192 t
ORIGIN      
        1 caggcgtgcc agacctcgta cccggtgacc gtgaacggct tcccgtccag cggccctccc
       61 gatacggtcc ggtgcctgcc gtcaggttcc ggctcatcca tgacgctcct cccagcgatg
      121 ctggttgacg aaacgaacaa agccccgagc aagccggccc cttcgctccc cgccccaccg
      181 cgccaggcag gaggatcagc actactacga gccgtccgac tgccagcccg gcaacggttt
      241 ccgcccctcg cgcatccggc gctcgcgggc atccctctcg ctgcccccga agagggcagc
      301 cgtgtccggg ctggctctcc gccgttccgc gcggacgccg cagaccaggc tcgcgccacc
      361 tctacgccgg gcaccacctg gccagcaatc cgggcaaccg ccaggcccat cccggagact
      421 taggcgctcc ccggttccga tgccaccttg acctaataac gacgcctcaa cggtgaacgc
      481 ccccgccatg aaccactggc acggacgctt tcagcgcaac gccttcctgg tccccgcctg
      541 acacctcaag ggcgcctttt ccccggtcgc tcaccacagc agcctcacgg ctgccgcagc
      601 acggggcggc ttgagaccgc cccccgaagg gcgatcccga ggggccacaa aaccctcatc
      661 atccgcacag cacgacaaga agatcaccta gtcaacggca acctccttgt ctcgacgcac
      721 acgcccaact cgggtccaca ccggtggccg ctacgactca cacctgctcg tccccatcgc
      781 gacacccgac gcatctgaca ccggccaggc gcggtcgtga atggcggcct cgaccggcca
      841 gaccaggcgc tcccggcagt gctaagagcg gagcacagga tgggcaggag ccctggggcg
      901 gaccgtatat ccactattag aagagcattc ttcaatttgt ggatagttaa cgctagccgg
      961 tctggcttcg accgaggatg gctaccgatg aaatcgcccc ggatgacact atcggcgggg
     1021 atataaatat gtaacccgat gactctccgc tggtgactct ccgcctcgcg atttaaggag
     1081 tcaggcggga gccaaacggg gagccaaagg ggggccaacg caggcagacc ccaagcgacg
     1141 ccaggcgacg tcccgcgacg atgatgcagg tcaggtggct catcaggcga cagtcagcga
     1201 cggcccgcga cggtcaaatt tcacctgaaa agcggaaggt cggcagttcg accctgcccc
     1261 tgaccaccag ttcagagccc cttccgggga ccggctcccg acgcgggaag ccaagcgggt
     1321 tg
//
LOCUS       DASRPQ010000871         1176 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3549119, whole genome shotgun sequence.
ACCESSION   DASRPQ010000871 DASRPQ010000000
VERSION     DASRPQ010000871.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1176
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3549119"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..299
                     /locus_tag="VFD73_09885"
     CDS             <1..299
                     /locus_tag="VFD73_09885"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HZI74314.1"
                     /translation="PVLIRQHQQVFEQFQGLGRSSFDKAYMAEMVKEHGEEVELFQKE
                     SKDGRVQSLKQLASNMLPDLQQRLALATETALSIGVQVASVSPDADSGSTSSGK"
     gene            complement(418..>1176)
                     /locus_tag="VFD73_09890"
     CDS             complement(418..>1176)
                     /locus_tag="VFD73_09890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite methyltransferase"
                     /protein_id="HZI74315.1"
                     /translation="KDGTKSSCCPSSCCGGAADDPISSDLYTEAQASSLPEKAVLASL
                     GCGNPTALIELQAGEVVLDLGSGGGIDVLLSAARVGPTGKVYGLDMTDEMLALARENQ
                     LKAGATNVEFLTGEIESIPLPDSSVDVIISNCVINLSGDKARVLREAFRVLKPGGRFA
                     VSDVVVRGELPETVRRSMELWIGCVAGALTEPEYTRLLEQVGFEEIGVEPTRIYEFDE
                     AKAFLEGTGLETEELAREVGGRVMSAFIRARKAP"
BASE COUNT          222 a          379 c          359 g          216 t
ORIGIN      
        1 cgccagtcct gatccggcag caccagcagg tcttcgaaca gttccaggga ttggggcgct
       61 cctcattcga caaagcctac atggccgaga tggtgaagga gcacggcgaa gaggttgagc
      121 tattccagaa ggaatcgaaa gacgggcggg tgcagtcgct aaagcagctc gcttcgaaca
      181 tgctgcccga cctgcagcaa cgcctggcgc ttgccaccga gacggcgctc tcgattggag
      241 tgcaggtcgc gtcggtctcc cccgacgcgg actccgggtc gacctcctcc ggcaagtagg
      301 taggagcact gcgaagcaag gaaggccccg tggtaattca gcagcactgc gcagtggact
      361 cgccggtgac gctgcgggat tgccacggac gcttcgcgtc ctcgcaatga ctccctccta
      421 gggcgccttg cgcgctcgga tgaaagcact catcacccgg cctccgacct cccgagcgag
      481 ttcctccgtc tctaggccgg tgccctcgag aaatgcctta gcctcgtcaa attcatagat
      541 cctggtgggt tccaccccga tctcttcgaa acccacctgt tccaagaggc gggtgtactc
      601 cggttcggtg agtgccccgg caacacagcc aatccagagc tccatgctgc gtcgaaccgt
      661 ctccgggagc tcgccccgga ccaccacgtc ggacaccgcg aagcggccac cgggtttgag
      721 tacccggaat gcttcgcgga gcacccgggc cttgtcgccc gagagattga tgacgcagtt
      781 cgaaatgatg acgtccaccg agctgtcagg gagcgggatg gattcgattt ctcctgtgag
      841 gaactctacg ttggtggcgc cggccttcag ctggttctcg cgggcgagcg ccagcatctc
      901 gtcggtcata tccaggccat ataccttacc cgtgggcccg acccgggcgg ctgatagcag
      961 cacgtcgatg ccgccaccgg agccgagatc gagcaccacc tctcctgcct gcagttcgat
     1021 cagcgcagtc ggattaccac atccgagcga ggcgagaacg gccttctcgg gcaagctcga
     1081 ggcttgagct tcggtgtaca ggtcagagct gatcggatcg tcggctgcgc caccgcagca
     1141 gctgctggga caacaggagc tcttggtgcc gtcttt
//
LOCUS       DASRPQ010000872         1300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4175769, whole genome shotgun sequence.
ACCESSION   DASRPQ010000872 DASRPQ010000000
VERSION     DASRPQ010000872.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4175769"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(31..438)
                     /locus_tag="VFD73_09895"
     CDS             complement(31..438)
                     /locus_tag="VFD73_09895"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HZI74316.1"
                     /translation="MPVIVVTRLRLKDPALFDEFFASAVAVVEQAQNSEGNLGADVLA
                     EANNTYWTRTVWQGHDLMDAFVGSEPHLHTMSRIDEWCDEATFVEWEQAAAELPDWQD
                     GYGRLVASGQGPSLTHATKAHHTRDFPAPVLSP"
     gene            complement(635..862)
                     /locus_tag="VFD73_09900"
     CDS             complement(635..862)
                     /locus_tag="VFD73_09900"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZI74317.1"
                     /translation="MPKIDPTGPVPPYLQVAEIIRNQIRSGKLPAGSRITEAEITETY
                     EVARSTARRTLAVLRDEGLIYTVPQRGSYVR"
     gene            978..1166
                     /locus_tag="VFD73_09905"
     CDS             978..1166
                     /locus_tag="VFD73_09905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74318.1"
                     /translation="MIEREPSRLEQILAKHGRRWQIERDGLVWTATEHPSPTALHVII
                     AHDLGALEQKIIDSELPG"
BASE COUNT          232 a          414 c          423 g          231 t
ORIGIN      
        1 gtcgccggtg tgccggtgct ggctcaacag ctagggggac aggactgggg cgggaaaatc
       61 acgggtgtgg tgggccttgg tcgcatgggt cagactcggc ccctggccgc tggcgaccag
      121 gcgcccgtaa ccgtcctgcc aatccggcaa ctccgcggcc gcttgctccc actcgacgaa
      181 ggtcgcctca tcgcaccact catcgatgcg gctcatggtg tgcaggtgcg gttcgctccc
      241 tacgaacgcg tccatcaggt cgtgcccttg ccagaccgtg cgggtccagt aggtattgtt
      301 cgcctcggct aacacatccg cgccgaggtt gccctcggag ttctgagcct gctccaccac
      361 agccacggcg ctggcgaaga actcatcgaa gagcgccggg tccttgagcc gaagccttgt
      421 gaccacgatg acgggcatcg caacctcccc gccccgggcc cgcgcacgag gcgaccggag
      481 ccgacgatct gaccgggttc gtcagcgtca gtatgcccat ggcaagcggg cggacacgag
      541 accgtgccta ccaggacacg ggcagccgac cgcaccacga agattctcaa tctgatggtg
      601 caggaatggc tgaggctgcc ttacttgggt gccctcagcg gacgtaactc ccacgttgcg
      661 gaactgtgta gatcaggccc tcgtccctga gtactgccag cgtgcggcgc gcggtcgagc
      721 gcgccacctc ataggtctcg gtgatctccg cctcggtgat ccggctgccg gcgggcagct
      781 tgcccgagcg gatctgattg cggatgatct ccgcaacctg gaggtagggc ggcacggggc
      841 cggtggggtc gatcttgggc acgccatgat cgtaatggct agagaccagc tcctacgtgc
      901 ttagacatct cgtgctgtct ctcgttgtat cgctatgctt gaggctcgtc atggtgcata
      961 cccgagggag acagaccatg atcgagcggg agccgtcgcg cctggaacag atcttggcaa
     1021 agcacggccg gcggtggcag atcgaacgcg acgggctggt gtggacggcg acggaacatc
     1081 cgagcccgac cgcactgcat gtcatcatcg ctcacgacct gggtgcacta gagcagaaga
     1141 tcatcgattc agagcttccc ggctgagcaa cgcccggttt ctcgcgcccc ttttgggatc
     1201 gcttggggac cgcacgctat acaagcgatc gaacaaggcg caggtggcta cccgtcgtgc
     1261 ccggcagcct gaatgcctct gagcagcgaa gaccagcgag
//
LOCUS       DASRPQ010000873         1966 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1670492, whole genome shotgun sequence.
ACCESSION   DASRPQ010000873 DASRPQ010000000
VERSION     DASRPQ010000873.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1966
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1670492"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..252)
                     /locus_tag="VFD73_09910"
     CDS             complement(<1..252)
                     /locus_tag="VFD73_09910"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI74319.1"
                     /translation="MTPSNPVIRLLLQVIDQAYDRKSWHGTTLRGSLRGVTAGEALWR
                     PGSGRHNIWELTLHAAYWKYAVRRRLAGAAIGSFERKPSN"
     gene            complement(249..1850)
                     /locus_tag="VFD73_09915"
     CDS             complement(249..1850)
                     /locus_tag="VFD73_09915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74320.1"
                     /translation="MHLRHILPAALFLCPVSLASQSTADSTPADPALVIRRVQLVRRD
                     IFDPSERGWIARLANKLHFQTQAPVIRREILLRPGDRYDSALVAESERNLRALGIFRR
                     VQIDSVRTDSGLVLRVLTKDGWSTQLDWRFRSTGGEVAFTLGVVETNLLGTASSAAVR
                     YRKDPDRSSIALAFRRRRLFAGTVGLEFGYENRSDGRLSGIAVERPFFSTTSANGFRV
                     GVEDDDARVLRFFEGQPEASDTLQRRFTLVRGSYAWALRAATSGYLRLGVAGQIRRDD
                     TLRVASTGSFPRTVTGSIGPYLSWNRSKFLVTHGYAGFSREEDVDLGTTLRVGLQAAP
                     GVFGYERDGLAPEVIGRVGVRLPGGFGYIDGFADALYTAAGLDSGTVQLAGTVALQPS
                     WRHLAVFHLEGGWLQDPVPGEEFDLGLGSGPRAFGSHSFTGDRSIFATAEYRYTVADD
                     LWGMAGIGFAGFVDHGGAWYAGSRRRTGWDAGVGLRLGASRSSDVPALRFDLARRFAN
                     DVQKAGWVITVGKGFAFTAPTRGVD"
BASE COUNT          392 a          656 c          613 g          305 t
ORIGIN      
        1 attgctcggc tttcgctcga acgatccgat ggccgctccg gcgagccgcc gtcgcacagc
       61 gtatttccag tacgcggcgt ggagcgtcag ttcccagatg ttgtgccgcc cggatcccgg
      121 cctccagagc gcctcgcccg cggtgacccc tctgagtgaa cctctcagcg tcgtcccatg
      181 ccagctcttg cgatcgtacg cctgatcgat cacttgcaac aagagccgga tcaccggatt
      241 ggacggagtc aatcaacccc ccgcgtgggc gcggtaaaag caaacccctt ccccactgta
      301 attacccatc ctgctttctg gacatcattg gcaaaccggc gagcgagatc gaaacggagc
      361 gccggcacat cggacgaccg gctggcccct aggcgaagtc ccacaccggc atcccacccg
      421 gttcggcggc gtgagcccgc ataccaggcg ccgccatggt cgacgaagcc agcgaagcca
      481 atgccggcca tgccccagag atcgtcggcg acagtgtagc ggtactccgc ggtcgcgaat
      541 atcgaccgat ctccggtgaa tgagtggctg ccaaaggctc ggggaccgct gccgagtccc
      601 agatcgaact cctcacccgg gaccggatcc tgcagccagc cgccttcgag gtggaacacg
      661 gcgagatgcc gccagctggg ctgcagtgcg acggtaccgg ccagctggac ggttccggag
      721 tcgagtccgg cagcggtgta gagtgcatcg gcaaagccat cgatatatcc gaagccgccg
      781 gggagtctga cgccaacccg cccgatcacc tcgggagcca gcccgtcccg ctcgtaaccg
      841 aaaaccccgg gcgcggcctg gagtccgacc cggagggtgg tgccgagatc gacatcctcc
      901 tcgcgggaga agccggcgta tccatgagtc accaggaact tggatcgatt ccagctcagg
      961 tacggcccga tcgagccggt gactgtccga ggaaaagacc ctgtcgaggc cacccgcagc
     1021 gtatcatccc ggcggatctg gccggcaacg cccagtcgca gataccccga agtcgccgct
     1081 cgaagcgccc aggcatatga cccccggacc agagtgaacc gccgttgcag agtgtcgctc
     1141 gcctccggct gcccttcaaa gaaccgcagc acccgagcat cgtcgtcttc aaccccgacg
     1201 cgaaacccat tggcggaagt ggtcgagaag aacggccgtt caaccgcaat tccgctcagc
     1261 cgtccgtcgg agcggttctc gtacccgaat tcgagcccca ccgttccggc aaacaagcgg
     1321 cgtcggcgga aggcgagcgc gatgctggag cgatcagggt cctttcggta ccgaaccgcc
     1381 gcactcgagg ccgtccccag cagattggtc tccaccactc ccagggtgaa ggcgacttca
     1441 ccgccggtgc tgcgaaaccg ccagtcgagc tgcgtactcc agccatcctt ggtgagcact
     1501 cggagcacca gtccagagtc ggttcgcacc gagtcgatct gcactcggcg gaaaatgccc
     1561 agtgcccgga ggttgcgctc ggactcggcg accagggcgg aatcgtatcg atcgccggga
     1621 cggagcagga tctcgcggcg aatgaccggc gcctgggtct ggaagtgcag tttattcgcc
     1681 aagcgggcga tccagccccg ctcactggga tcgaagatgt cgcgccggac cagctggacc
     1741 cgtcggatca ccagtgccgg atcagccggc gtggaatcgg cggtactctg agatgcgagg
     1801 gagaccggac agaggaacag cgcggccggc aagatgtgcc gaagatgcaa ccgtactcca
     1861 ggtgaacaga gggtagcgag ccagcgatgc ctcaagataa gaggtcgcta ctccagggcg
     1921 gctatgctgt cgagaattcg atcgggctgg atcccgctat tggaca
//
LOCUS       DASRPQ010000874         1146 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1990409, whole genome shotgun sequence.
ACCESSION   DASRPQ010000874 DASRPQ010000000
VERSION     DASRPQ010000874.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1990409"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1146
                     /locus_tag="VFD73_09920"
     CDS             <1..>1146
                     /locus_tag="VFD73_09920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74321.1"
                     /translation="AESILTSLLNEITTMQDPFLLVLDDYHVIDSRAVDEALNFLVEH
                     LPPQMHLVITTREDPALPLPRLRARRQLTELRAADLRFTPSEAAEFLDQVMDLPLLAE
                     DVAALEDRTEGWIAGLQLAALSMRGRQDVSGFIQEFAGDNRYIVDYLIEEVLERQPEA
                     VRGFLLQTSILDRLNGPLCDAVTGQTGGNARLEVLQRGNFFLIPLDDRRHWYRYHHLF
                     ADVLRMHLVTEQPELVPALHRRASEWFEQNGAAADAIHHALAAQDFERAAYLIERVQP
                     AMGQARQEATLLGWLRALPEELFRNRPVLSVHYVGTLLQNGKFEGVEARLRDAERWLD
                     KDIREQPVFVEEEDFRRLPGFVAMYRAAIALARGDVANSMQHARQVL"
BASE COUNT          210 a          361 c          348 g          227 t
ORIGIN      
        1 cgccgaatcg atcctgacct ccttactcaa tgaaatcacc accatgcagg atccattcct
       61 gctcgtactg gatgactatc acgtgatcga ttccagagcg gttgacgagg ctctcaactt
      121 tctcgtcgaa cacctgccgc cccagatgca cctggtgatc accacgcggg aagacccggc
      181 tctacctctc ccccgcttgc gcgcccgcag acaattgacc gagctgcgcg ccgccgacct
      241 gcgctttacg ccctccgaag ccgccgaatt tctggaccag gtgatggacc ttcccctgct
      301 ggcggaagat gtggctgcat tggaagaccg caccgaaggc tggatcgccg gcctgcagtt
      361 agccgccctt tcgatgcggg gacgccagga cgtctccggg ttcatccagg aattcgccgg
      421 agacaaccgt tacatcgtgg actatttgat cgaagaggtg ctggagcgcc agccggaagc
      481 ggtccgcggc ttcctgctcc agacctccat cctcgaccgc ctgaatggtc cgctgtgcga
      541 tgctgtgacg ggacaaacgg gaggcaatgc gcggctggaa gtcctgcagc ggggcaactt
      601 ctttctcatt ccactggatg acaggcgtca ctggtatcgc tatcaccatc tctttgccga
      661 tgtcctgcgt atgcacctgg tgacggagca gcccgagctg gtacccgccc tgcatcgacg
      721 ggcgagcgag tggttcgagc agaatggtgc ggctgccgat gcgatccacc acgcccttgc
      781 cgctcaggat ttcgagcggg cggcatacct gatcgaacgg gtccagccag ctatggggca
      841 ggccaggcag gaagccacgc tgctgggctg gctccgggcg ctccccgagg agctgttccg
      901 gaaccggccc gtgctcagtg tccactatgt aggcacactg ctccagaatg gcaagtttga
      961 gggtgttgag gcgcgcttgc gggatgcaga gcgctggctc gataaagata ttcgtgagca
     1021 acccgttttc gtggaggaag aggactttcg gcgtctaccc ggctttgtcg ccatgtaccg
     1081 cgccgccatt gccctggctc gaggcgatgt ggcgaactcg atgcaacacg cccggcaggt
     1141 gcttga
//
LOCUS       DASRPQ010000875         1718 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2924207, whole genome shotgun sequence.
ACCESSION   DASRPQ010000875 DASRPQ010000000
VERSION     DASRPQ010000875.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2924207"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..376
                     /gene="nth"
                     /locus_tag="VFD73_09925"
     CDS             <1..376
                     /gene="nth"
                     /locus_tag="VFD73_09925"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0140078 - class I DNA-(apurinic or
                     apyrimidinic site) endonuclease activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HZI74322.1"
                     /translation="TKSLIGMAQALVADHGGEVPRTMEGLRKLPGVGRKTANVILGNA
                     YGINEGVTVDTHVTRLSGLLGLSKQADAEKIEQELMRQFPQENWGLLSHLLIFHGRQV
                     CIARRPRCGDCVLAQICPSSLV"
     gene            525..>1718
                     /locus_tag="VFD73_09930"
     CDS             525..>1718
                     /locus_tag="VFD73_09930"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI74323.1"
                     /translation="MNLVGGHAVSGALLAAAGATTAAATPRLDSYRSSPAYRRVLIVA
                     PQPFYQDRGTPIAVRQVLEGLSQLGYSVDLLTYPVGSDIQVPGVRLFRTPNPMRFRNV
                     PVGLSLKKILLDIPLTLQLAARLRNNAYTCIHAVEEAAFPAVLLGHHHKLPVIYDMQS
                     SLSEQLATYPGLRATPLRRVLESLEGWLLSRADMVVSSAGLASRVREIAPQVTLREWH
                     YPSVMVPAAKGDTDRLRRGLAIPPGAPIVLYGGTFESYQGLKQLIQAIPLVRAQVPDA
                     MFVLVGAENGSGTAVRAQGAALLEAGALRIIDRQPRHQIPGYLGLADILVSPRSYGGN
                     LPLKVFDYLAAGRPIVATDIPTHRTVLTEDRAVLVAPQTEDIARGIVSLLRNPERAER
                     LARAAR"
BASE COUNT          316 a          543 c          516 g          343 t
ORIGIN      
        1 gaccaagagc ctgatcggca tggcccaggc actggtcgcg gaccatggcg gtgaagtgcc
       61 gcgcacgatg gaaggcctcc gcaaactccc cggggtcggc cggaagacgg ccaacgtcat
      121 tctgggaaac gcttatggga tcaatgaagg cgtcactgtc gacacccatg tcactcgcct
      181 gagcggcctg ctgggattga gcaagcaggc ggatgcggaa aaaatcgagc aggagctgat
      241 gcggcaattt cctcaggaga attggggact cctgtcccat ctgctcatct ttcacggccg
      301 ccaggtttgt atcgcccgca ggccccggtg cggcgactgt gtactggccc agatctgccc
      361 ttcttctctg gtgtaattcg gcctgcgctg ggcaggcttc ttgcaactcc cccctgcaca
      421 atttctgcac tctgaagaga tagcggtcga ccggttcaag tagctcgatt ttgctcgtgt
      481 ggctctccat gcagtcgaac tggtcaactt caccgaggca tgccgtgaac ctggttggcg
      541 gacatgctgt tagcggcgca ctcctcgccg cggcgggggc aaccaccgct gcggcaacac
      601 ctcggctcga cagctaccgc tcgagtccag cctaccgccg agtgttgatc gttgcacccc
      661 agccgttcta ccaggatcgg ggcactccga tagcagttcg ccaggtactg gaagggctga
      721 gccagctcgg atactcagtg gatttgctga cctacccggt gggcagtgat atccaggtac
      781 ccggggtacg gctgttccgg actccgaatc cgatgcgctt ccgaaacgtt ccggtcggac
      841 tctctctaaa aaagatcctg ctggacattc ccctcaccct tcagctcgcg gctcgtctca
      901 ggaacaatgc atatacctgc attcatgccg tcgaggaggc tgctttcccg gcagttctgt
      961 tggggcacca ccacaagctg ccggtgatat acgacatgca gtccagcctt tcagagcagc
     1021 tcgctacata cccgggcttg cgcgctacac ccctgcggcg cgtgctagag tcgttggaag
     1081 gatggctact gagccgagcg gacatggttg tgagtagcgc cggactcgcc tcccgagtcc
     1141 gggagattgc ccctcaggtg accctgcgag agtggcacta ccccagcgtc atggtgccgg
     1201 cggcaaaggg tgacaccgac aggcttcgcc gagggctcgc gattccgcct ggtgctccga
     1261 tcgtactcta cggcggcacc ttcgagagtt accaaggcct caaacagctg atccaggcca
     1321 ttccgctggt ccgagctcaa gtgcccgacg cgatgtttgt tctcgtcggt gccgagaacg
     1381 ggagtggcac tgcagtgcgc gctcaaggcg ccgcgctcct cgaggcggga gccctgcgaa
     1441 ttatcgatcg tcagccgcgg caccagatac caggatatct ggggcttgct gatatcttgg
     1501 tttcgcctcg ttcgtacgga ggcaacctgc ccctcaaagt gttcgactac ctggcggcgg
     1561 gtcgccccat cgtcgctacc gacatcccca cccatcgcac ggtactcaca gaagatcggg
     1621 cggtgctcgt ggcacctcag accgaagata tcgccagggg catcgtgagc ctgctgcgta
     1681 atcctgaacg ggcggagcgg cttgctcgcg cagcccgt
//
LOCUS       DASRPQ010000876         1472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3244373, whole genome shotgun sequence.
ACCESSION   DASRPQ010000876 DASRPQ010000000
VERSION     DASRPQ010000876.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1472
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3244373"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..260)
                     /locus_tag="VFD73_09935"
     CDS             complement(<1..260)
                     /locus_tag="VFD73_09935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74324.1"
                     /translation="MPIPINIPARPSETLCPSTIIAEGLLNPRGICVQADGSLLLTEA
                     GSGLPEQPFSGRISRLRPDPHKPGAYLPGEILAQGFRAMNMQA"
     gene            complement(294..>1472)
                     /locus_tag="VFD73_09940"
     CDS             complement(294..>1472)
                     /locus_tag="VFD73_09940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74325.1"
                     /translation="GLRSIIQAPGATGIVLRFVMFEMCPTMTTEQLDADYAAGRYTPN
                     PSIGRVIGTLAPAFADEPLNCQPGRQLVNQSTGNTGYADLGGNGYLSIDMVNVIPKQT
                     FRAVRDDITSPIGPNANYGPVTITAGTTELATLDPTNRFLFDYYVYGGIVDLPLTANQ
                     LQAVQTAALAINAPGKVAGTTLQATESTYRVYADQRNVYLEDYPNGLSITLQVRYLGG
                     PVPKATEIDLQAAAPAVYDEPQYWDFLDFPASLTVNPGQLAISFPVTVKAGSAAQAGF
                     VALTCTANGLPSSGYFTSFRKYAQTDFGIPAGTHITWELMYPNVLRFHYLAFPAMSRY
                     IPLNQPDAVMGAKNPILARTSDAYKGTTLFMPVVRSMSPCQRALLRAYLTGEPWQPPQ
                     "
BASE COUNT          265 a          391 c          529 g          287 t
ORIGIN      
        1 gcctgcatgt tcatggcgcg aaaaccttgc gccagtatct cgccgggcag ataggcgccg
       61 ggcttgtgtg gatccggtcg cagtcgactg atacgaccgc tgaagggctg ttccggcagg
      121 cccgagccgg cttcggtcag cagcaggctg ccatcggcct gcacgcaaat gccccgaggg
      181 ttcagcaggc cttcggcgat gatggtgctc gggcacaggg tttcgctggg ccgcgcaggg
      241 atattaatgg gaatgggcat agggctctct ccatgaataa cggatggatg cggttactgc
      301 ggcggttgcc acggttcgcc ggtgagataa gcccggagca gcgcccgctg gcagggcgac
      361 atcgagcgca ccacaggcat gaacagcgtg gtgcctttgt acgcatccga agttcgggca
      421 aggatggggt tcttggcgcc catgaccgcg tcgggctgat tgagcgggat gtagcgcgac
      481 atggcgggga aggccaggta gtgaaagcgc aggacgttcg ggtacatcag ctcccaggtg
      541 atgtgggtgc ccgcggggat gccgaagtcg gtctgtgcgt atttgcggaa gctggtgaag
      601 tagccactgc ttggaaggcc attggccgtg caggtcaagg cgacaaagcc cgcctgggcg
      661 gcagaacccg ctttgacggt gaccgggaaa ctgatcgcga gctggccagg gttaacggtc
      721 agcgatgcag gaaaatcgag gaaatcccag tattggggtt catcgtaaac agcaggagca
      781 gcagcctgca ggtcgatttc ggtggctttg gggaccggac cgcccaagta cctgacctgc
      841 aaggtgattg acaggccatt ggggtagtcc tccaggtaga cgttgcgctg atcggcatac
      901 acccgatagg tcgattcggt ggcttgcaac gtggtaccgg cgaccttgcc gggcgcgttg
      961 atcgccaggg cggcggtctg cactgcctgt agctggttgg cggtcagggg caggtcgacg
     1021 atgccgccat acacgtagta gtcgaataga aagcggttgg tcgggtccag ggtggccagt
     1081 tcagtggtgc ctgcggtgat ggtgacgggg ccgtagttcg cgttcggtcc gatagggctg
     1141 gtgatatcgt ccctgacggc cctgaaggtt tgcttcggaa tgacgttcac catgtcgatg
     1201 ctcaggtaac cgttgccgcc caggtcggca tagccggtat tccccgtact ctggttgacc
     1261 agttgccggc ccggctggca gttcagcggc tcgtcggcga aggccggggc cagtgtaccg
     1321 atgaccctgc cgatgctcgg gttgggggtg tatcggccgg cggcataatc ggcgtccagt
     1381 tgttccgtgg tcatcgtggg gcacatttcg aacatgacga aacgcaggac aatgccggtc
     1441 gcacccggcg cctggatgat cgagcgcagg cc
//
LOCUS       DASRPQ010000877         2275 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2924739, whole genome shotgun sequence.
ACCESSION   DASRPQ010000877 DASRPQ010000000
VERSION     DASRPQ010000877.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2924739"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            871..2133
                     /gene="ltrA"
                     /locus_tag="VFD73_09945"
     CDS             871..2133
                     /gene="ltrA"
                     /locus_tag="VFD73_09945"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: protein motif:HMM:TIGR04416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZI74326.1"
                     /translation="MGELKAAGKPFQISKRAVWEAWEKVKANKGAPGVDGQTIARFET
                     DLKNNLYKVWNRMSSGSYFPPPVRAVEIEKAHGGGTRILGVPTVADRVAQTVVATELE
                     RKVEPIFHPDSCGYRPGRSALDAVAACRSRCWKTDWVIDLDIRKFFDSVPWELVVKAV
                     EANTDLPWVVLYVRRWLQAPLVLPDGSLQVRDRGTPQGSAVSPVLANLFLHYAVDNWM
                     AREFPGVTFERYVDDAVVHCASQAQAHRVLAALQERTREVGLELHPDKTRIVYCKDSN
                     RRGSHEHTAFTFLGFTFRGREVRPRSGKRFTGFNPAISSDALKKISRQVRSWRLHRHT
                     EISEADLAAWVNPRVRGWMQYYGAFYRSALYPLLTRINAYLMRWLRKKHKRLRGRKKA
                     QEAWTRAVTTRPRFFAHWAWVNTVPAVW"
BASE COUNT          411 a          670 c          806 g          388 t
ORIGIN      
        1 cgtcgcccgc gcccggcaat cccgcggcga gtcggtgact gccatcgccc agcacctaaa
       61 gatcggccgg tccacgctgt accgggcact gcaaccgcgc gaggaagacc ttgcatcagc
      121 cgccgccgcg gagccgggcc ggtaaaacgc cagatagcgc cgaaggttcc ctgccactta
      181 ccgggttctg ccccacattt cgtgatggca acgggcgcgg ctccggtcat gccagcaaga
      241 ctcgcttacg gagtagatcg aatcgggcat ggccatacat ttgccgtttg gtgtgtcctg
      301 aacgtggagg aggttcggta ggtcgagttt ctgaagcgat gctgcacgga agatgaagga
      361 tttcggccct tcggagtcgc ccggcggtgg gaggctccaa accgcctcat gctgcgttgg
      421 ctgatgaccg tcgtggtgag cgatgaggaa aaggcgccct gagaggtgtc aggtggggac
      481 caggaagacg aacgcgagtg aatcgttgct gacgtgtcga aacagataca gacgacatcg
      541 aaaccggggt gtcaaacgga tcccgggaca agcctggcgg gtgtgccgcc ttctggccag
      601 gcggtgtccg gcatgtagac gacgtgagcc tggtctgcgg cttccgtgtg gaacaggaga
      661 aggcgtgccc ggatacgccc tggtcgtgcg gccaggggag agggagtgtc ccaagcggcc
      721 acaccgcaag ggattgagta ccgtcgccgg gcgcgctggc ggaccggttc gtagtagcgg
      781 tgaaggtctt gtaatggggc cggagcgaag gggccgggtt gtccgcggct ggtctgtccg
      841 atcaaccgga tgttctccgg gaggagtcgc gtgggcgagc tgaaagcagc aggcaagccg
      901 tttcagattt cgaagcgggc ggtctgggag gcgtgggaga aagtcaaggc gaacaagggc
      961 gcgcccggcg tggacgggca gacgatcgcg cggttcgaga cggacctgaa gaacaatctt
     1021 tataaggtct ggaatcggat gtcctcgggg tcgtacttcc cgccgcccgt gcgcgcggtg
     1081 gagatcgaga aggcccatgg aggcggcacg aggatcctcg gcgtgcccac cgtggccgat
     1141 cgggtcgccc agacggttgt ggccacggag ctggagcgga aggtcgagcc gatcttccac
     1201 ccggactcct gcgggtaccg gccagggcgg tccgcgctcg atgcggtggc tgcctgccgc
     1261 tcgcggtgct ggaagacgga ctgggtgatc gatctggaca tccggaagtt cttcgacagc
     1321 gtgccgtggg agctggtggt caaagcggtc gaggcgaaca ccgacttgcc gtgggtggtg
     1381 ctgtatgtcc ggcggtggct gcaggcgccg ctggtgctgc ccgacggttc gctgcaggtt
     1441 cgtgaccggg gaaccccgca gggttccgcg gtctcacccg tgctcgcgaa cctgttcctg
     1501 cactacgcgg tcgacaactg gatggcgcgg gagttccccg gcgtcacctt cgaacgctac
     1561 gtggatgacg cggtcgtgca ctgcgccagc caggctcagg cacatcgggt gctcgcggcc
     1621 ctgcaggagc ggacgcgcga ggtcggcctg gaactgcacc cggacaagac caggatcgtg
     1681 tattgcaagg acagcaaccg gcgcggctct cacgagcaca ccgcgtttac tttcctgggg
     1741 ttcacgttcc ggggccggga ggtacgtccc aggtccggta agcggtttac cgggttcaac
     1801 ccggcgatca gcagcgacgc cttgaagaag atcagccggc aagtgcggtc gtggcggctg
     1861 caccggcata ctgagatctc tgaagcggac ctcgcagcct gggtcaatcc ccgggtgcga
     1921 ggctggatgc agtactacgg cgccttctac cgctcagcgc tgtatcccct cctgacgcgc
     1981 atcaacgcct acctgatgcg ctggctccgc aagaagcaca agcggctgcg aggacggaag
     2041 aaagcacagg aagcctggac cagagccgtc accacgaggc cccggttctt cgcccactgg
     2101 gcttgggtga acaccgtccc cgcagtctgg tgaccaggac agcaagagcc gtataacgag
     2161 agatcgttac gtacggttcc gtgagagccg ggggctgaga cgcccccggc tactcgacag
     2221 catcttgatc cggttgacgt tgccctcgac gacgcccgag ttccaggtct tggtc
//
LOCUS       DASRPQ010000878         1061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2924820, whole genome shotgun sequence.
ACCESSION   DASRPQ010000878 DASRPQ010000000
VERSION     DASRPQ010000878.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2924820"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VFD73_09950"
     CDS             complement(<1..183)
                     /locus_tag="VFD73_09950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74327.1"
                     /translation="MAEAFIEERHLLKSLRWWDGFVIALCNPGFLIASLGFSMGVLGT
                     WGAVLLWAISAAIGMLQ"
     gene            385..747
                     /locus_tag="VFD73_09955"
     CDS             385..747
                     /locus_tag="VFD73_09955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74328.1"
                     /translation="MRKVRGAQITVRCDCGGIGYVPYGERWECPTCHRRWNTTQIPAE
                     EYWGIMRDMRRTRINVLVTSLGIVVPILILSVFGGIRILLLLPVVMSFWFLFYMPRWR
                     RRVREQARSLRRWKLHPE"
     gene            754..>1061
                     /locus_tag="VFD73_09960"
     CDS             754..>1061
                     /locus_tag="VFD73_09960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74329.1"
                     /translation="MRTLQRSEPGTTTRPSFAGGRPVMLATLDVPFDAKAVTYAVDSV
                     VELGERLIVANFVERAPLPLSAMLGYEDLPETPEMAESLGEPVQLAHSLGINVTKLRV
                     "
BASE COUNT          186 a          352 c          336 g          187 t
ORIGIN      
        1 ctggagcatg ccgatggccg ccgagatcgc ccacaggagc accgcacccc aggtgccgag
       61 gacccccatg gagaagccca gggacgcgat caggaacccc gggttacaca gggctataac
      121 gaacccgtcc caccagcgaa gcgacttcag caggtgccgt tcctcaataa aagcctcggc
      181 catcgggcac ctccgttcac cgcaggtaaa ctttgtttag cacgtcacag tccgctatgt
      241 ctatacgcat cgtgcctgcg tatccgctgg gttaccacgt gcgctcgccg agcgtatcag
      301 cccagtcccg ctgtgtccgg ggccttgtga gcgcaccgcg cggccttgcc cgaaatctgt
      361 tcgggccgcc cgccaacacc tacaatgcga aaggtgcgtg gtgctcagat caccgtccgt
      421 tgcgactgcg gcgggatcgg atacgttccg tacggcgagc ggtgggagtg ccccacgtgc
      481 catcgccgct ggaacactac gcagatcccg gcggaggagt actgggggat catgcgggac
      541 atgcggcgga cccgcatcaa cgtgctcgtc acctcgctag gtatcgtggt cccgatcctg
      601 atcctgtcgg tgttcggcgg catccggatc ctgctgctgc ttccggtcgt gatgagcttc
      661 tggttcctgt tctacatgcc ccggtggcga cggcgggtcc gtgagcaggc gagaagcctg
      721 cgcaggtgga aactgcatcc tgagtgacgt gagatgcgaa cgctgcaacg gtcggagccg
      781 ggcaccacaa cccggcccag cttcgccggg gggcggcccg tcatgctcgc aaccctcgac
      841 gtaccgttcg acgccaaggc cgtgacctac gcggtcgatt cggtggtcga gctcggcgag
      901 cggctcatag tcgccaactt cgtcgagcgg gcaccgctgc cgctgtcggc catgctgggc
      961 tacgaagacc ttcccgagac gccggaaatg gcagagtctc tcggcgagcc cgtgcagctc
     1021 gcccactctc tcgggatcaa tgtgaccaag ctccgggtga g
//
LOCUS       DASRPQ010000879         1349 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3244912, whole genome shotgun sequence.
ACCESSION   DASRPQ010000879 DASRPQ010000000
VERSION     DASRPQ010000879.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1349
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3244912"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            334..>1349
                     /locus_tag="VFD73_09965"
     CDS             334..>1349
                     /locus_tag="VFD73_09965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74330.1"
                     /translation="MRSRRRGNSVRPLGPGGGSELNRRRVLTGGIGAGALLALPDLGM
                     GARAGVSGRAAERYAFVYGTPDLDEAPSGSLVAAMCPPSREAPARPVPVAVKLAAAPV
                     SSPDQAVTALATVDMVHDGAKITLTLLDATGATVARQGSVTVTGVPGDAHVLVTPVFA
                     PGSAIVSLVLAITVPVGKHLVRKAHPHTGKLDPRLATTWRSHHALAYFDQRSGATTGP
                     FHLSDEPALALSTAAANSSDLLLWTTREPQPDDPVAVRAQASLSRLSVFPLGSGKARL
                     STPVPAPWPGGEPVATLPTGDVARLVRGRHVQVCSARTGEVTELEIAALRHGRAKPSA
                     VTMQA"
BASE COUNT          223 a          429 c          452 g          245 t
ORIGIN      
        1 cagcagaaga ggcttttcct cattacgcat cctctccctc gggcggcttt acgccagcta
       61 cctgacaggc gaaccggaca ctcagtcata aatcagccat tacgccgctg accagggacg
      121 ttgaaactca cgaaatccgc cgcatcggcg tgtcaaatag ttctaagtac gcacatcgct
      181 aggatgctgg cgtgaagtgg gatcgaccgg aggtcctgag gatacaagag acggttagcg
      241 gcagcctcga tcctttttgc aagagcgttg aacgacagga ggctcctgtt gttcaacgcc
      301 gtttagctca gtgagttgtc aggagcgaag ttcgtgcgtt ctcgaaggcg gggaaactca
      361 gtccggcctc tcggcccggg cggcggctcg gagctgaacc gtcgccgggt actgactggt
      421 ggtatcgggg ccggtgcgct cctagccctg ccggatctcg gcatgggcgc ccgggccggc
      481 gtatctggcc gggccgccga acgctatgcc ttcgtttacg gcacgccgga tctggacgaa
      541 gcccctagcg ggtctctggt cgctgcgatg tgtccgccat cgcgggaggc gccggcgagg
      601 ccggtcccgg tcgccgtgaa gctcgcggct gcgccggtgt cgtcaccgga ccaggctgtc
      661 acggccctgg ccacagtgga catggtgcac gacggggcca agataacgct gacgcttctt
      721 gacgccaccg gggctaccgt cgcccggcaa gggtcggtga ctgtgaccgg cgtccctggc
      781 gatgcccacg ttctggtgac accggtcttc gctcctggct cggccatcgt ttccctggtt
      841 ctggccatca ccgtgccggt gggcaaacac ctggtgcgca aggcgcaccc gcatacgggc
      901 aagctggatc cccggttggc gacaacctgg aggtcgcatc atgcgctggc ctacttcgac
      961 cagcgcagcg gggctacgac cgggccgttc cacctgtccg atgagcccgc cctggcgttg
     1021 tctacggcgg cagctaacag ctcggatctg ctgttgtgga ccaccaggga accgcagccg
     1081 gatgatccag tcgcggtccg ggcccaggca tcgctgtcca ggctgagcgt atttcccctg
     1141 ggcagcggca aggccaggtt gtcgacgccg gtgccggccc cgtggccagg aggggaaccc
     1201 gtcgcaacgc tgccgactgg tgacgtagct cgcctggtca ggggtcgcca tgtgcaggtg
     1261 tgctcagccc ggaccggaga agtgactgag ctggagatcg ctgcgctacg ccatgggcgc
     1321 gcgaaaccga gtgccgttac catgcaggc
//
LOCUS       DASRPQ010000880         1077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2924939, whole genome shotgun sequence.
ACCESSION   DASRPQ010000880 DASRPQ010000000
VERSION     DASRPQ010000880.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2924939"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..170)
                     /locus_tag="VFD73_09970"
     CDS             complement(<1..170)
                     /locus_tag="VFD73_09970"
                     /inference="COORDINATES: protein motif:HMM:NF019139.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rho termination factor N-terminal
                     domain-containing protein"
                     /protein_id="HZI74331.1"
                     /translation="MDIAELKQKSVAELHTLAEQLNISNYSGLRKQDLIFRIEQSLLD
                     SDTVIRGEGVLE"
     gene            472..756
                     /locus_tag="VFD73_09975"
     CDS             472..756
                     /locus_tag="VFD73_09975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74332.1"
                     /translation="MTAQPYRFGSAAAARDPVVHELPPLRLSDQLIAIHLTVRRDDDG
                     TWRARLRFIDPELAARETAEIFCAGSEPELWESVRSLPEHHLRALYLSLA"
     gene            762..944
                     /locus_tag="VFD73_09980"
     CDS             762..944
                     /locus_tag="VFD73_09980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74333.1"
                     /translation="MSDADRLSRLRHDLSNPLSALLAETQLLLLNERTLDPGTVTSLR
                     EIEALAIRMRTMLREI"
BASE COUNT          210 a          354 c          332 g          181 t
ORIGIN      
        1 atctcgagca cgccctcgcc ccggatgacc gtgtccgaat cgaggagcga ctgttcgatg
       61 cggaagatga gatcctgctt cctgaggccg gagtagttgg aaatgttcaa ctgctcagcc
      121 agcgtgtgca gctccgcgac cgatttctgc ttcagctcag cgatatccac ggacgagact
      181 ccagagggac ggggccagcc gacgatgcgg cgggcggtgg gatgaaatga acgtaagaac
      241 ccttatgtaa ggctggacaa tggtctaggt gactgtaggt gcgatgtatg aagtggcccc
      301 gggaccggag ctggcggtgc atgaagtgtg acggggagtt tcctgccgac ccaagaagca
      361 tctcaactta gagcgccttt gaagacccgt caagaggggg gtcctgcatt gcataacttg
      421 cagtcccgta cgatctttga acaccacagc accccacccg gaggtactgc gatgacggct
      481 cagccatacc ggttcggctc cgcagccgcc gcccgggatc ccgtcgtcca tgaacttccc
      541 cccctccgcc tctccgacca gctcatcgcc attcacctca cggttcgccg agacgacgac
      601 ggcacctggc gagcccgact ccgcttcatc gacccggagc tggcggcccg cgagacagcc
      661 gaaatcttct gcgccgggtc ggagcccgag ctctgggaat cggtccgcag cctgccggaa
      721 catcacctgc gggcgttgta cctgtcgctg gcgtagatca catgtcggat gccgatcgac
      781 tcagcaggct gcgacacgac ctgtcgaacc cgctctcggc cctcttggcc gagacccagc
      841 tgctgctgct caacgagcgg acgctcgatc cggggacggt gacgagcctg cgggagattg
      901 aagcgctggc gatccggatg cggacgatgc tgcgcgaaat ctgagcccgc tggcgagata
      961 gccggcgagc agcgccaggc tcacggcact ggccgccagc cgaacgctca cgctgtaccc
     1021 gcccgccgag atgaacccct cgatcaaacc cgcgatcacc agcagcaccg ccgtggc
//
LOCUS       DASRPQ010000881         1596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4504297, whole genome shotgun sequence.
ACCESSION   DASRPQ010000881 DASRPQ010000000
VERSION     DASRPQ010000881.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4504297"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            188..574
                     /locus_tag="VFD73_09985"
     CDS             188..574
                     /locus_tag="VFD73_09985"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HZI74334.1"
                     /translation="MKPNGYTHVVVAPDGRTVYVAGQVALDSTGQVVGSGDFKAQAEQ
                     VFRNLNRALESVGGSLADVIKTTTYVTEFKNVAALREIRGKYLTGGHPPANTLLVVSS
                     LARPELLLEIEAVAVLGQAVRLTHGD"
     gene            564..>1596
                     /locus_tag="VFD73_09990"
     CDS             564..>1596
                     /locus_tag="VFD73_09990"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase"
                     /protein_id="HZI74335.1"
                     /translation="MATSPARRLVHDADGLNTGTWPVPADQFITPAPDLFSRSHAAVP
                     TIDPIRWRVVIDGLVRRPLAFSLGDLERFPRREVTATLICAGLRRDEFLSLGPLSGEL
                     PWGPEPAGTGCWRGFGLREILAEANPDPRARYVEFVGLDQVERQGRQFGFGASIDLSK
                     ALGAEVLLATELNGHPLAPPHGSPVRAIVPGWIGARSVKWLGRITLLAEPSSNYFQTQ
                     AYRVQREQNPDDPRDVSRGTALTSVAVNAVILEPTRDQILSAGPAAVRGWAMGCEGNR
                     LRRVEVSADGGRQWVPAQLGHHEPWSWTLWESEVALHRGRHELVVRATDEDGNSQPAT
                     IAETWNVKGY"
BASE COUNT          284 a          516 c          504 g          292 t
ORIGIN      
        1 tgcctctgtg gtgaatgctc tagaatgaga tctcccccag tccacgccaa ccaaaccgga
       61 actcgacgtg acattcctac gctgccttcc tagtgttgct gcaattgttg gggccctgat
      121 ctttagcgcc cgtcattctg ctcaagccca ggcgcaggga cccagattca tcaacccaca
      181 cgggttggtg aagcccaatg gatacaccca cgtggtcgtg gcgccggatg gccgcacggt
      241 gtacgtcgcg ggacaagtcg ctctcgacag caccggacag gtggtgggga gcggtgactt
      301 caaggcgcag gcggaacagg tatttcgaaa cctgaaccgg gcactggaga gcgtcggtgg
      361 gtcgctcgcc gacgtgatca agacgaccac ctacgtgacc gagttcaaga atgtcgccgc
      421 actccgggag atccggggaa agtacctcac cggcgggcac ccgcctgcaa acaccctgct
      481 ggttgtctcc agtctcgccc gccccgagct gctcctcgag atcgaagcgg tggcggtcct
      541 cggccaggcg gttcggctga ctcatggcga ctagtcccgc tcgccggctg gttcacgatg
      601 ccgatggact gaacaccggc acctggcccg ttccggccga tcaattcatc actcccgcgc
      661 cagacctctt ttctcgcagt cacgcagcag ttcccaccat cgatcccatt cgctggcgag
      721 tcgtaatcga cggactggtc cggcggccgt tggcattctc acttggcgac ctggagcgat
      781 tcccccgccg agaagtcacc gccaccctca tatgcgccgg gctccggcgg gacgagtttc
      841 tatcgctggg acctttatcc ggcgagctgc cctggggtcc ggaacccgca ggaaccgggt
      901 gctggcgcgg gttcggactc cgggagatcc tcgcggaagc aaaccctgac ccgcgggcgc
      961 ggtatgtcga gtttgtcgga ctggaccagg tggaacgtca gggacggcag ttcggcttcg
     1021 gggcttccat cgatctctcc aaggcgctcg gagcggaggt gctgcttgcc accgagctca
     1081 atggccatcc tctggcccca cctcacggct ccccggttcg ggcgatcgtg cccggatgga
     1141 tcggcgctcg cagtgtgaag tggctcggcc gtatcaccct gctggcagag ccgtccagca
     1201 actatttcca aacccaggcg taccgagttc agcgtgagca gaaccccgat gacccgcgcg
     1261 atgtatcccg cggcaccgcg ctgacctcgg tcgcggtcaa tgcagtcatt ctggagccca
     1321 cccgagatca gatcttgagc gcagggccgg cagccgttcg cggctgggcc atgggatgtg
     1381 aaggaaaccg cttacgtcgc gtcgaggtct ccgccgacgg tggtcgacag tgggtgccgg
     1441 ctcaactcgg tcaccatgag ccttggtcct ggactttgtg ggaatcagag gttgccttgc
     1501 accgcggcag acacgagctg gtggtgcggg caacggacga ggacggcaac tcccagccgg
     1561 caacgatcgc ggagacctgg aacgtgaagg gctatg
//
LOCUS       DASRPQ010000882         1484 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_734145, whole genome shotgun sequence.
ACCESSION   DASRPQ010000882 DASRPQ010000000
VERSION     DASRPQ010000882.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1484
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_734145"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..208)
                     /locus_tag="VFD73_09995"
     CDS             complement(<1..208)
                     /locus_tag="VFD73_09995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74336.1"
                     /translation="MIWRGRVPGGHGIVALLGAVVVSQGCRTRADRQLASAAPRDCAP
                     DNGGLVLPQGFCATVFADSLGHARH"
     gene            complement(205..1230)
                     /locus_tag="VFD73_10000"
     CDS             complement(205..1230)
                     /locus_tag="VFD73_10000"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HZI74337.1"
                     /translation="MLTFVMRVTSTRHPGLHLRRKALRDEDRVTIQRSTGLTARYVIA
                     GTAASLALLLLGGWRTAPPPRRLAVVDNVGDAEAVTYDPGTNAYFVSDVHGDPGVKDG
                     NGTIVRISADGKLEDRHFIQGGQKGVTLNAPMGSRVRGDTLWVLDVDALRGFNTHSGA
                     PLATIDLAPAGALFLNDFDFAPDGGMYVTDMRLRAGANGDMAPAGPGRIYHVSRDHRV
                     TVALESSALKFPDGLGWDPKAKRVIIAPFTDAPVQEWHPRAGQPEAVANGKGRFDGVE
                     VEPDGSILITSWNDSTVSTLEGKQLVHRIGPLSMTPADVSMDVRRGRVGIVSMEVGRF
                     ELWTWSK"
     gene            1278..>1484
                     /locus_tag="VFD73_10005"
     CDS             1278..>1484
                     /locus_tag="VFD73_10005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase family protein"
                     /protein_id="HZI74338.1"
                     /translation="MSLRPAETFFYGLFMDEELIRAKGLDPKNVELASVAGRTLRIGR
                     RATLEPNPNSRVHGVLMSLAWAELQ"
BASE COUNT          271 a          487 c          465 g          261 t
ORIGIN      
        1 gatggcgggc atgtcccaga ctatcggcga acacggtagc gcagaatccc tggggcagga
       61 ccagccctcc attatctgga gcgcagtccc gcggcgcggc cgaagcgagc tgacggtcgg
      121 ctctggtgcg gcagccctgc gagaccacga ccgctcccag gagagccacg atgccgtgcc
      181 cacctggcac acgtccgcgc cagatcattt ggaccaggtc catagctcga atcgcccgac
      241 ctccatcgac acaatcccca cccgtccccg gcgaacatcc atgctcacat ccgccggggt
      301 catgctgagc ggcccgattc ggtgcaccag ctgcttgccc tcgagcgtcg acacggtgga
      361 atcgttccag ctggtgatga ggatgcttcc gtcgggctcg acttccacac cgtcgaaccg
      421 tccctttccg ttggcgactg cttcgggctg gcccgcgcgt ggatgccatt cctgcaccgg
      481 cgcatcggtg aagggtgcga taatgacccg cttggccttg ggatcccaac ccaacccatc
      541 cggaaacttc agcgccgagc tctccagcgc caccgtcacc cgatgatcgc gcgagacgtg
      601 atagatccgg cccggtccgg cgggagccat atcgccgttc gctccggcac ggagacgcat
      661 atcggtaacg tacatgcctc cgtcaggcgc gaagtcgaag tcgttgagga agagtgctcc
      721 ggcgggagca agatcgatcg tagcgagagg cgcgccggag tgggtattga acccgcgcag
      781 cgcatcgaca tcgagcaccc agagcgtgtc gccccggacc cgggatccca tcggggcgtt
      841 cagggtgacg cccttttgac cgccctggat gaagtggcga tcctccagct tgccgtcggc
      901 gctgatccgt acgatggtgc cgttcccgtc cttcacaccg ggatcgccat gcacgtcgct
      961 tacaaagtac gcgttggtgc cgggatcata ggtcactgcc tcggcatcgc cgacgttgtc
     1021 gaccacggcc agccggcgcg gcgggggtgc tgttcgccag ccgccgagca acaggagtgc
     1081 gagcgatgca gcagtccccg ctatgacgta tctggccgta aggccagtcg acctctgaat
     1141 tgtcacccga tcttcatccc gcaaagcctt gcggcgaagg tggaggccgg gatgccgcgt
     1201 ggatgtgact cgcatcacga acgtcagcat aagtttcgct cctctgcggt tacgatgaga
     1261 agaacctgga ggatctcatg agtctgcgtc cggcggaaac gttcttctat ggactcttca
     1321 tggatgagga gctcattcgc gcgaaaggac tggatcccaa gaacgtggag ctcgcgtcgg
     1381 tggccggacg caccctccgc atcgggcgac gggccacgct ggagccgaac ccgaatagca
     1441 gagtccatgg cgtactcatg tcgctcgcgt gggccgagct gcag
//
LOCUS       DASRPQ010000883         1660 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4177132, whole genome shotgun sequence.
ACCESSION   DASRPQ010000883 DASRPQ010000000
VERSION     DASRPQ010000883.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4177132"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            451..1233
                     /locus_tag="VFD73_10010"
     CDS             451..1233
                     /locus_tag="VFD73_10010"
                     /EC_number="4.2.2.n1"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HZI74339.1"
                     /translation="MTEEAHGPAAEIRTNVPPRRVDVPRRVDVPPRRAVRPAPVRRMR
                     VDSAALELTVTRRLAHRPLAMALERHIRNPELADRVASAIVYEAGRARLSPSLLAGVL
                     LIENSRFDTSAVSTEGAIGLMQVMPVHVGSYRCLSGDLLDVEANICHGARLLSSYVRR
                     AKSLEAGLRRYNGCVRGRNTPRCQHYPARVLRTASRLRREMFVSAARLDPSVLSPDLK
                     SSSLAAQAPAAEETEADTVESSEASDCATLMGCLRRRWSSSR"
     gene            complement(1300..>1660)
                     /locus_tag="VFD73_10015"
     CDS             complement(1300..>1660)
                     /locus_tag="VFD73_10015"
                     /inference="COORDINATES: protein motif:HMM:NF020119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CocE/NonD family hydrolase C-terminal
                     non-catalytic domain-containing protein"
                     /protein_id="HZI74340.1"
                     /translation="IDVFPDSVPEHWEWGGYELMVAHEIMRGRYRKSYSTPEPLAPNT
                     PLDFTVDLHQQSYTFQRGHRLMVQIQSTWFPLYDRNPQSWVSNIFKARPQDFRIATHR
                     IWHTPARPSRVEIDVLP"
BASE COUNT          271 a          524 c          536 g          329 t
ORIGIN      
        1 cgcttggcga ctgcggtgta gcgtgctgac cgggtccatt ccgccgacac cgtaaagcta
       61 tccaccagga ccgtggtggg cctccgggcc aagtcgggaa tcgtgccgag gggtgcccgt
      121 gccatgccgc ctcctttgta acgattgccc ctcgtgccac cgcgtgcacc ggcgcaccgt
      181 tcgtttccga ggaagggcgc tacttggact tccgtcgccg tacgccagca tgccacgatt
      241 gcaagtgtca ggttcctcgc cgccatcagt tttagaacac ttgaggccgc ctatggcacg
      301 ggcgatactg cggcacgtct tcgtcagagg agcgccatgt tccccgctat gtgtcgtggc
      361 agggcgctac acctgtgtct gttcgcggtc ctcagtcccg tggccgcgtg cgcctcgact
      421 ggacccggca ccactcctcc gctgtcgcct atgacagagg aagcccacgg gccggctgcg
      481 gagattcgca cgaacgtgcc gccacgtcgg gtagacgtgc cgcgtcgggt ggacgtgccg
      541 ccacgtcgtg ctgtccggcc cgctccggtt cgtcggatgc gggtggacag cgctgcgctc
      601 gagctgacag tgaccaggcg cttggcgcat cgtccactgg cgatggcgct ggaacgccat
      661 atccggaatc cggagctggc agaccgggtc gcttccgcaa tcgtgtatga ggcgggacga
      721 gcccggctga gcccgagtct tcttgcgggc gttctcttga tcgaaaactc tcgatttgat
      781 accagtgccg tcagcaccga aggcgcgatt ggcctcatgc aggtcatgcc ggtgcatgtg
      841 ggcagctatc gctgcctctc cggcgacctg ctcgatgtcg aagccaacat ctgccacggc
      901 gctcgactgc tgagcagtta cgttcgccgg gcgaagtcgc tggaggccgg cctgcgccgg
      961 tacaacgggt gcgttcgcgg gcggaacacc ccgcgctgcc agcactatcc tgcccgagtc
     1021 cttcgcaccg cctcgcggct ccgccgggaa atgtttgtga gcgccgcgcg gttggacccc
     1081 agcgtcctct cgcccgatct gaagtcttcg agtctggcag cccaagcccc agctgcggaa
     1141 gagaccgagg cggacacggt ggagtcgagc gaagcgtctg attgcgccac cctcatgggc
     1201 tgtctcaggc ggcgctggag ctcgtctcgg taaactgctg ttctggttga agctgggaac
     1261 ctgctctgat cctagttcga gcctggtgcc tgcgctctct cagggaagca catcgatctc
     1321 cactcgcgat ggacgcgccg gcgtgtgcca gatgcggtgg gttgcgatac ggaaatcctg
     1381 gggacgggct ttgaagatat tcgagaccca ggactgcgga ttccgatcgt agagtggaaa
     1441 ccaggtgctc tgaatttgca ccatcaggcg atggccccgt tgaaaggtgt agctctgctg
     1501 gtgcaggtcg acggtgaaat cgagaggagt gttcggagcc agcggctcgg gagtcgaata
     1561 actcttgcga tatcttccgc gcatgatctc gtgggcgacc atcagctcat agcctcccca
     1621 ctcccaatgc tccggtacgc tgtccggaaa gacatcgatg
//
LOCUS       DASRPQ010000884         1309 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1044202, whole genome shotgun sequence.
ACCESSION   DASRPQ010000884 DASRPQ010000000
VERSION     DASRPQ010000884.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1044202"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1309)
                     /locus_tag="VFD73_10020"
     CDS             complement(<1..>1309)
                     /locus_tag="VFD73_10020"
                     /inference="COORDINATES: protein motif:HMM:TIGR04514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GWxTD domain-containing protein"
                     /protein_id="HZI74341.1"
                     /translation="EALRRAGKTAAGNDPEVLLARGRVEREVGDADSALAAFKTYLDR
                     GPNHSLGLLEVARTQFLLGSFDGVAPYYEGAASDDSTTVSGYRGDLATIASDSVLAEF
                     DQQHGAQRAAYLKRFWSSRDLLDMRAKGERLREHYRRLFYARKNFQLATTNRHYDIVE
                     RYRSGSRDFDDRGVIYIRHGEPSSRATYAAPGLEPNESWRYSRPDGDLIFHFIAREDV
                     QDFKLVESLFDVLGFSNAVKLQGQDNGAADNAMAEQLMLSRERLSPIYRRLEGAGRMS
                     TGRYQTQERRVGQESIAIGTTSDSYELRFPQQLKTHTEVLAVGHDSNGPQVQIAYALA
                     GSSLEPVTVTRGYLYSVRLRFVATDERGRVVSSLDTTRHFVAPAPVPPNEHLVGRVST
                     TVVPGSLHYRLALQEGEVAGVTLPRDSVRVGPTTPSSLSLSDLA"
BASE COUNT          230 a          414 c          421 g          244 t
ORIGIN      
        1 gggcgaggtc actgaggctc agggatgacg gcgtggtcgg ccccactctg acgctgtctc
       61 gcgggagagt aacgcccgca acctcaccct cctgtagagc caaccggtag tggagcgagc
      121 ccggcacaac ggtggtgctc acccggccca ccaaatgctc gttgggaggc actggagcgg
      181 gggcaacgaa gtggcgggtg gtatcgagcg aggacaccac gcgcccccgc tcgtcggtgg
      241 caacaaagcg gagcctgacg ctgtacagat atccccgggt gaccgtaacc ggttccaggc
      301 tcgagcctgc cagagcgtag gcaatctgga cctgggggcc attggaatcg tggcccaccg
      361 ccaggacctc tgtgtgagtt ttgagctgct gcgggaaacg cagttcgtag ctgtcactag
      421 tggtcccaat cgcgatgctt tcctggccga cacgtcgctc ttgggtttgg tagcgcccgg
      481 tactcatccg gcccgctccc tctagccggc gatagatggg cgatagccgc tcgcgcgaca
      541 gcatcagctg ctcggccata gcgttatcgg ccgcgccatt gtcctggcct tgcagcttga
      601 cggcattgct gaagcccagc acgtcgaaca ggctctccac cagcttgaaa tcctgcacgt
      661 cttcccgggc tatgaaatgg aagatgagat cgccgtccgg gcgactgtac cgccaggact
      721 cattaggctc cagtccgggt gcggcgtagg tggcccgact ggaaggctca ccgtgtcgga
      781 tgtagatgac gccgcggtcg tcgaagtccc tgctgccgga tcggtagcgc tctacgatgt
      841 cgtagtgccg gttcgtggtg gccagctgga agttctttcg agcgtagaac aggcggcggt
      901 agtgctcccg caaacgttct cccttggccc gcatgtccag caggtctcgg ctgctccaga
      961 atcgtttcag atacgcggcg cgttgtgccc cgtgctgctg gtcgaactcg gccagcacgc
     1021 tgtcggaggc gatcgtggcc agatcaccgc gatagccgga gaccgtagtg gaatcgtctg
     1081 acgccgcgcc ctcgtagtag ggagccaccc catcgaagct ccccagcagg aattgggtcc
     1141 gggcaacctc gagaagaccg aggctgtggt tgggccccct gtccaggtag gtcttgaacg
     1201 cggctaacgc agaatccgcg tcccccacct cacgttcgac ccggccacgc gcaagcagaa
     1261 cctcgggatc attaccggct gcggtcttgc cggctcgacg taatgcctc
//
LOCUS       DASRPQ010000885         1012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_105403, whole genome shotgun sequence.
ACCESSION   DASRPQ010000885 DASRPQ010000000
VERSION     DASRPQ010000885.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105403"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..526
                     /locus_tag="VFD73_10025"
     CDS             <1..526
                     /locus_tag="VFD73_10025"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HZI74342.1"
                     /translation="HFVSRGETLGGIALKYHVSQSMVMAANPKLNSRRIQIGQRVVIP
                     TGGVPSTRVARRMADPVVAAGTSTSAYHRVHKGETISEIADEYGVTQRELKAWNKLDS
                     RGHIRAGQNLRVVSPDAPRPPASDARTHVVQRGDTLKGLAKRYGVSIQALREANGLDE
                     RSPLRVGLALRIPG"
     gene            complement(523..>1012)
                     /locus_tag="VFD73_10030"
     CDS             complement(523..>1012)
                     /locus_tag="VFD73_10030"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HZI74343.1"
                     /translation="GESVVLKLQLERANTILENSARYQIPADLSTAIYDIALSEGIDP
                     SLGYQLVKIESQFNRKAKSKMQAYGYTQLQVETARFYQPGIKEKDLYDRDTSLRLGFR
                     FLNELLARFHYDVHLALLAYNRGPAKVDEILAKGGNPANGYSDAVLKGYRPLTSMPGA
                     SR"
BASE COUNT          199 a          308 c          337 g          168 t
ORIGIN      
        1 gcacttcgtg agccggggcg agacgctggg cggaatcgcg ctcaaatacc acgtgagcca
       61 gtccatggtg atggcagcca atcccaagct caacagccgg agaatccaga tcggccagcg
      121 agtggtcatt ccgaccggag gcgtgccttc aacccgggtt gcgcgccgaa tggccgaccc
      181 ggtcgtcgcc gcggggacca gcacctcggc gtatcaccgg gtgcacaagg gagagacgat
      241 ctcggagatt gcggacgagt acggagtgac ccagcgcgag ctcaaggcct ggaacaaact
      301 ggacagccgg ggacacatcc gggccggcca gaacctgcgg gtggtgtcgc cggacgcgcc
      361 ccggcccccg gcaagcgatg cccggactca cgtggtgcag cgaggagata cactgaaagg
      421 cctggcgaaa cgctacggcg tctcgatcca ggccttgaga gaagcgaacg gtttggatga
      481 gcgcagcccc ctgagagtcg ggctggcgct ccggatcccg ggctagcgag aagctccggg
      541 catcgaagtc agagggcgat agcccttcag cacagcgtcg gagtagccgt tggccggatt
      601 cccacccttg gccaggatct cgtccacttt ggccggtccc cgattgtacg ccagcaacgc
      661 cagatgcacg tcgtagtgaa agcgcgccag caactcgttc aggaaacgga acccgagacg
      721 caggctggtg tcgcgatcgt agagatcctt ctccttgatc cccggctgat agaagcgcgc
      781 ggtctcgacc tggagctggg tgtacccgta cgcctgcatc ttgctcttgg ccttccgatt
      841 gaactggctc tcgatcttga ccagctgata gccgagtgag ggatcgatgc cctcgctcag
      901 ggcgatgtcg tagatggcgg tggagaggtc cgccggaatc tgatagcggg cggaattctc
      961 cagaatggta ttggcgcgtt ccagctggag cttgagcacg acgctctcgc cc
//
LOCUS       DASRPQ010000886         5179 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2623609, whole genome shotgun sequence.
ACCESSION   DASRPQ010000886 DASRPQ010000000
VERSION     DASRPQ010000886.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5179
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2623609"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..491)
                     /locus_tag="VFD73_10035"
     CDS             complement(<1..491)
                     /locus_tag="VFD73_10035"
                     /inference="COORDINATES: protein motif:HMM:NF018984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CGNR zinc finger domain-containing protein"
                     /protein_id="HZI74344.1"
                     /translation="MTIDFTLLGDAIWLDFVNTAKGRTAPPPDLLSDDAAMLEWTLAQ
                     RLHCDGDAPLLQQALELRERLTALAEALHQGMQPPAGSIAAINEQLAQGQGCHQLTRV
                     GGEWQLRFSPLKRPPVLQAIARSAAATLAQPLLLVRQCAGLNCSLFFTDDSPNQSRRW
                     CNPA"
     gene            complement(499..1833)
                     /locus_tag="VFD73_10040"
     CDS             complement(499..1833)
                     /locus_tag="VFD73_10040"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HZI74345.1"
                     /translation="MGSTPYPSLATLPSAFAAACRLSRTEGELFERCRIALVRRFQSE
                     RIWFSLTSPSDSLARVGPTAGFEDSAEVARLASGQTEVVIHADPLVAEEMRGAAMALA
                     LGLSVVLELRSILLERQSALDDAVFQLRALRQVARLLSSVHSTEETEQLILDFMAEVF
                     FAWWACLYRPEGETYTPRVFRSLNDRLRPAPIVRSALDQAVPPGTPAVGTEQVALSEL
                     VGPGAELVVPLDAGAERMAVLVLGSRISDKLYGRAESELAGTLSFAAAIALKNSELVE
                     QLHSAATTDELTGLCNRRALEERLGAEISRSLRHQLHTSVLLLDLDRFKVVNDTMGHA
                     AGDRLLVQVGQILRKQCRALDVVGRLGGDEFLVILPMTKPAEARVFVARVQASLREIE
                     RTNPEFGACTLSMGIAESPQHGTTVSSVLAAADNALYRAKRAGRNTVEVAEA"
     gene            complement(2015..3523)
                     /locus_tag="VFD73_10045"
     CDS             complement(2015..3523)
                     /locus_tag="VFD73_10045"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HZI74346.1"
                     /translation="MRPLLLILLGTVAACISGAPPPIPLNPVRFLSINDVSVADTLSG
                     DQGGLARVATVRRRLRDTGPVLFVLAGDALSPSVASRFYRGRQMIDALNAAKLDYATF
                     GNHEFDIEGDTLIARIAESKFKWLSSNCTRANGSAFPQVLPWDTLRVSGHKVGLFGLT
                     LQGPYPPYVRCSNPDSAAHRVIQTLVAEGADLVVGVTHQAMHADRELLGREPKLDLIL
                     GGHEHVAQDSVVSGRHVVKADENATSAQFVTLWGGKDKWRQAVGNVRIDGTLPSDTAV
                     SAVVARWRDSVERKLGPPRTVGTTAVAIPPSDTSARRNESVLGDLVTDAMRAGTGSDV
                     ALLNAGTLRLADTIPPGPITNRALEAMFPFSDDTRVVTFRLTGTRLRSVLEHGVSAQV
                     LGTGGFLQVSGITFTYDTTGTSGSRVGEIRRSSGRPLQPNDTVSVALNSYPACRGGDG
                     YSIPEAGAACRQLQAAPRALDLLSRYISDSLGGKVESPRASRVVQSANKNPG"
     gene            complement(3520..4137)
                     /locus_tag="VFD73_10050"
     CDS             complement(3520..4137)
                     /locus_tag="VFD73_10050"
                     /inference="COORDINATES: protein motif:HMM:NF024724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HZI74347.1"
                     /translation="MNGYSDRINHAFAFAAKYYGAVAPAGAGMDYLAHPANVAIILAR
                     YDCDHITIVAGILHHVLEEVLPDQRAVLERKIADKFGPVVLAVAKDALEPKFDRRGGE
                     RAWQARKQEYLAQLAIAEPRALDICVADEIHACGSTMTALRRLGVEYLRTVSRAGSEQ
                     TIWWYRSMLEILTARSDWPQREMISELRMMSADLVRSLRQREVDL"
     gene            complement(4275..4910)
                     /gene="queE"
                     /locus_tag="VFD73_10055"
     CDS             complement(4275..4910)
                     /gene="queE"
                     /locus_tag="VFD73_10055"
                     /EC_number="4.3.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase"
                     /protein_id="HZI74348.1"
                     /translation="MSYAVKEIFYTLQGEGANTGRPAVFCRFAGCNLWTGREQDRLQA
                     TCQFCDTDFVGIDGVGGGRFDSAAQLANAIAAAWPIDAESPRFVVCTGGEPLLQLDSA
                     LIGALHDNGFEVAVETNGTVEPPPDIDWLCVSPKAGAGLVVRQGDELKLVFPQTGAEP
                     AEFEQLRFRHYFLQPMDGPEREVHTAAALQYCLRHPRWRLSLQTHKLLGIP"
BASE COUNT          943 a         1709 c         1634 g          893 t
ORIGIN      
        1 gcgggattgc accagcgccg gctttgattg ggagagtcgt cggtaaaaaa gagagaacaa
       61 ttgagcccag cacactgccg aaccagcagc agcggctgag ccagagtggc tgcggctgag
      121 cgggcaatcg cctggagaac cggcggccgc ttcaggggag aaaaccgcag ctgccactct
      181 cccccgaccc gggtcagctg atgacatccc tgcccctggg ccagctgctc gttgatcgcc
      241 gctatcgagc cggcgggagg ttgcatgccc tggtgaagcg cctcagccaa tgcggtcagc
      301 cgctcccgca gctccagcgc ttgttgcagc aacggagcgt cgccgtcaca gtggagccgc
      361 tgggccaggg tccattccag catcgcggca tcgtcggaca ggagatcggg cgggggtgcc
      421 gtgcggcctt tggccgtgtt gacgaaatcc agccagatgg cgtcgcccag caaggtgaag
      481 tcgatggtca cgttggttct atgcctcggc aacctcgacg gtattgcgac cggcgcgctt
      541 ggcccgatac agcgcgttgt ccgctgcggc aaggacgctg ctgacggtcg ttccatgctg
      601 gggagactcg gctatgccca tgctcaaggt gcaggcgccg aactccggat tcgtccgctc
      661 gatctcccgc agactcgcct gaacccgggc gacgaacact ctggcctccg ccggctttgt
      721 catgggaaga atcaccagga actcatcgcc cccgagccgg ccaaccacgt ccagagctcg
      781 acattgcttt ctcaggatct ggcccacctg gaccaggagg cggtcgcctg cggcgtgtcc
      841 catcgtatcg ttgaccacct tgaagcgatc gaggtcgaga aggagcacgc tggtgtgaag
      901 ctgatgtctc agactgcggg agatctcagc gcccagccgc tcctccagcg ctcgccggtt
      961 acacaagccg gtcagctcat ccgtcgtcgc agcgctatgc aactgctcga ccagctccga
     1021 gttcttgagc gcgatggcgg cggcgaacga cagagttcca gccagctccg actcggcccg
     1081 gccgtagagc ttgtcgctga ttcgcgagcc taagaccagc accgccattc gctcggcgcc
     1141 ggcgtcgagc ggcaccacca gctcggcacc cggacccacc agttcggata gcgcgacctg
     1201 ttcggttccg accgcgggag tgcccggagg aaccgcctga tccagcgccg atcgaacgat
     1261 gggtgcgggg cgcagccggt cattcaaaga tcgaaatacc cggggtgtgt aagtctcgcc
     1321 ttccggccgg tagaggcacg cccaccaggc gaaaaacacc tcggccatga agtcgagaat
     1381 cagctgttca gtctcttccg tagagtggac cgacgagagc aggcgggcta cttggcggag
     1441 agcgcggagc tggaacacag cgtcatccag cgccgactgg cgctccagca ggatgctgcg
     1501 gagctcgagc accacgctga gtcccagcgc cagcgccatg gcagcgccgc gcatctcttc
     1561 cgccaccagc ggatcggcat ggatcaccac ctcggtctgg ccgctggcga gccgtgcgac
     1621 ctcggctgaa tcctcgaaac cggccgtcgg ccccacccga gccagggagt cggagggtga
     1681 tgtcaagctg aaccagatcc gctcactctg aaaccggcgc accagcgcga tccggcagcg
     1741 ttcgaacagc tctccttcgg tgcgggagag ccgacaagct gctgcaaagg cactggggag
     1801 cgttgcgagt gatgggtaag gggttgaacc cattccctaa gatacaagcc cactaccact
     1861 gagggcagcg gcagggcttg tgcggagagt gccctgctgg ttaagttttt tgaagaattg
     1921 ctacgacata gccctacggg gccccaggga tttcagcttt gcagcctggg tgatgaaaac
     1981 ctgctaaagc tatcttcccg gccaagctag ttgctcagcc gggattttta tttgcgctct
     2041 gaaccacgcg cgaggccctc gggctctcca ccttcccgcc aagtgaatcc gagatgtaac
     2101 gcgacaggag atcgagcgcc cgaggagccg cttgcaactg ccggcacgcc gctcccgcct
     2161 ccgggatcga gtagccatcg ccaccccggc aggcgggata gctgttgagt gccactgaga
     2221 cggtgtcgtt gggctggaga ggtcgtccac tgctgcgccg gatttctccg acccggctgc
     2281 cggacgtgcc agtggtatcg taggtgaacg ttattcccga tacctgaaga aaccccccgg
     2341 tccccagaac ctgggcggac accccgtgct ccaggacact ccggagccgc gtcccggtca
     2401 gccgaaaggt gacgactcgg gtgtcgtcgg aaaaaggaaa cattgcctcg agggcacgat
     2461 tggtgatcgg cccgggcggg atggtatccg cgagccgaag cgtaccagca ttgagcagcg
     2521 ccacgtcgct cccggtaccc gcccgcatgg catcggtcac cagatcaccc aggaccgact
     2581 cgttgcggcg agccgacgtg tccgacggag gaatcgctac cgcggtggtc cctacggtgc
     2641 gtggcggtcc gagctttcgc tctacgctgt cgcgccaccg agcaacgacg gccgaaactg
     2701 ccgtatcact gggcagagtt ccatcgatgc ggacattgcc caccgcttgc cgccacttgt
     2761 ccttgccgcc ccagagcgtc acgaactgag cactggtcgc attctcgtcc gccttgacca
     2821 catggcggcc ggagacaacc gagtcctgcg ccacgtgttc gtgcccgccc agaatcagat
     2881 ccagcttggg ctcgcggccg agcagctcac gatcggcatg catggcctgg tgggtcactc
     2941 ccacgaccag atcggcacct tcggcaacca gtgtctggat gacgcggtgc gccgcactgt
     3001 ccgggttgga gcagcggacg tagggggggt aggggccctg cagcgtcaag ccgaacagcc
     3061 ccaccttgtg tcccgaaact ctcagggtgt cccagggaag cacctggggg aatgcgcttc
     3121 cgttcgcccg agtgcaattg ctcgacagcc acttgaactt ggactccgcg atccgggcga
     3181 tcagcgtatc tccctcgata tcgaattcgt gattgccaaa ggtggcataa tcgagcttgg
     3241 ccgcgttcag agcatcgatc atctgccggc ctcgataaaa ccggctggcc acgctggggc
     3301 tgagcgcgtc gccggcaagc acaaacagca cgggtccggt gtcccgcagc cttcttctca
     3361 ccgttgccac ccgggctagg ccgccctgat ctcccgaaag ggtgtcggcc accgagacat
     3421 cattgatgga gaggaatcga accgggttca gcgggatcgg cggcggagcg ccgctgatgc
     3481 aggcggcgac tgttcccagc aggatcagga gcagcggtct cacagatcga cctcccgctg
     3541 ccgcaggctg cgaaccagat cggcgctcat catgcggagc tcggagatca tctcccgttg
     3601 gggccagtcg gaccgagcgg tcaggatctc cagcatcgag cgataccacc aaatggtctg
     3661 ctccgagccg gcgcgcgaga cggtccgcag atactccacc ccgagccgtc tgagagcggt
     3721 catggtcgat ccgcaggcgt gaatctcgtc tgcgacgcaa atgtcgagcg cccttggctc
     3781 ggcgatcgcc agctgggcga gatactcctg cttccgagcc tgccaggcac gctccccgcc
     3841 gcggcggtcg aacttcggct ccaacgcatc tttggcaacc gcaaggacga ccgggccgaa
     3901 tttgtccgcg atctttcgtt cgagcaccgc ccgctggtcg ggaagcacct cctcgaggac
     3961 gtggtgcaga atgccggcga cgatcgtaat gtgatcgcag tcgtaccggg ccaggatgat
     4021 cgccacgttg gcggggtggg ccaggtagtc catacctgcc cccgccggag ccacggctcc
     4081 gtagtacttg gcggcaaagg caaatgcgtg attgatgcga tcggagtagc cgttcattct
     4141 cagcggggca gaagggcagc ggggcagcgg ggcgggtgcg ggggctggcc gggcagaggg
     4201 gcgtcgcggt gagcactgcc gacttcccat cctgtcgtgg tgctgctccg ctgccccgcc
     4261 gccccgccgc cccgctatgg aattcccaga agcttatgcg tctgcaggct gagccgccag
     4321 cgcggatgcc gcaggcaata ctggagggcg gccgcggtgt ggacctcgcg ttccggacca
     4381 tccatcggtt gcaggaaata atgtctgaac cggagctgct cgaattcggc aggctccgcc
     4441 ccggtctgag ggaagaccag cttgagctcg tcgccctggc gcaccaccaa accggcaccg
     4501 gccttggggc tcacgcatag ccagtcgatg tctggagggg gctcgactgt tccattggtc
     4561 tccacagcaa cctcgaaccc gttgtcgtgt agggcaccga tcagcgcgct gtccagttgg
     4621 agcagcggct ctccaccggt acacacgacg aaccgcgggc tttcggcatc gatcggccat
     4681 gcggccgcaa tcgcgtttgc cagctgcgcc gccgagtcaa atcgtccccc gccgactccg
     4741 tcgatgccga cgaagtcggt atcgcagaac tggcaggtgg cctgcagccg atcctgttca
     4801 cgcccggtcc acaggttgca acccgcaaaa cggcagaaca cggcgggccg cccggtgttg
     4861 gcgccttcgc cctgaagagt gtagaagatc tccttgaccg cgtagctcat tccaagaagc
     4921 gtgagcggta aggggtaagc ggtgagcggg aacagctcga ccgcggcacc tcgccagttc
     4981 gtctgctttg ccagctcgcc atacggctca ccttccccca gtcactgctc gcctggccgc
     5041 ttgccgcttc cgctcacgct tgtctcagtc cctctcaccg ctcaccgctt acctgctgat
     5101 actgtgccgg atcttcaatt cccgcctccc gaaacccctt cagccgaagc aggcatgcct
     5161 cgcagtggcc acacgcgcg
//
LOCUS       DASRPQ010000887         1047 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2298474, whole genome shotgun sequence.
ACCESSION   DASRPQ010000887 DASRPQ010000000
VERSION     DASRPQ010000887.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2298474"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..202)
                     /locus_tag="VFD73_10060"
     CDS             complement(<1..202)
                     /locus_tag="VFD73_10060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74349.1"
                     /translation="MPTRIPILLLALVLGGCSHRVPSTDLPLSKMSFQVTVLARSASE
                     AEVLVSIRPGQRVHLVAQRVEMA"
     gene            complement(355..867)
                     /locus_tag="VFD73_10065"
     CDS             complement(355..867)
                     /locus_tag="VFD73_10065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74350.1"
                     /translation="MTGERCIASDTGPLITLEKLGGGFRFIRLLYDKILIPRVVLEEL
                     VQGQFLSPRAYIEHYGIADLLEVVEAQEAREIPGGELLDAGEIKAIQLALERGLPLLI
                     EEEAGRQVARHLGLHISGVAGQILHAFRTSVIPGAEAAEMLGELLQAGCINKRIYEGS
                     MDVVRGKRDS"
     gene            complement(864..>1047)
                     /locus_tag="VFD73_10070"
     CDS             complement(864..>1047)
                     /locus_tag="VFD73_10070"
                     /inference="COORDINATES: protein motif:HMM:NF015630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UPF0175 family protein"
                     /protein_id="HZI74351.1"
                     /translation="DARFLKEALVAALYSMNKLSGRQAREALGMTRRAFEEVLPRLGF
                     SILVDSQENLDIELGA"
BASE COUNT          195 a          349 c          324 g          179 t
ORIGIN      
        1 cggccatctc gacccgctgc gcgacgaggt gcacgcgctg cccaggtcgg atcgacacca
       61 agacctcggc ctccgacgcg ctccgcgcca gcaccgtgac ctggaagctc atcttcgaca
      121 gcgggagatc cgtggaaggc acccggtgcg agcaccctcc gaggaccagg gcaaggagga
      181 ggatcggaat tcgggtcggc atcattctgt atacgtgcga gcggccggaa tgcttactga
      241 gagtcacggt gaggtacttt gaagtcacgg tgaggtacct caaagtcgcg gcccgtccgc
      301 agacgggaga accgctgact cccgagccct cgcggctctc aggctgcctg ggtctcagga
      361 atcccgtttc ccccggacca cgtccatcga accttcatag attctcttgt tgatgcagcc
      421 agcttgaagg agctccccca gcatctcggc agcctcggcc ccaggaatca cgctggtccg
      481 gaaggcgtgg aggatctggc cagccactcc cgagatgtgg agcccgaggt gccgggcgac
      541 ctggcgcccg gcttcctcct cgatcaacaa gggtagacct ctctccaagg cgagctggat
      601 ggccttgatc tcgccggcat ccagaagctc tcccccgggg atctccctgg cctcctgagc
      661 ttcgacgact tcgagcagat cggcgattcc gtaatgctcg atgtaggcac gggggctcag
      721 gaactggccc tggaccagtt cctccaggac aacccggggg atcaagatct tgtcgtagag
      781 aagccggatg aaacggaatc cgccgccgag cttttccagc gtgatcagcg gccccgtatc
      841 gctcgcgatg cagcgctcgc cggtcaagca cccagctcga tgtcgaggtt ttcctggctg
      901 tccacgagaa tggagaagcc gagccggggg agcacctcct cgaaggcgcg ccgggtcatg
      961 cccagggcct cccgcgcctg ccgtcccgac agcttgttca tggaatagag agcggccacc
     1021 agcgcctcct tcaggaagcg cgcatcc
//
LOCUS       DASRPQ010000888         1137 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2925528, whole genome shotgun sequence.
ACCESSION   DASRPQ010000888 DASRPQ010000000
VERSION     DASRPQ010000888.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1137)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1137)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2925528"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..768
                     /gene="thiD"
                     /locus_tag="VFD73_10075"
     CDS             <1..768
                     /gene="thiD"
                     /locus_tag="VFD73_10075"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HZI74352.1"
                     /translation="DSGGGAGIQADLKTFQQFGVFGTSVIVALTAQNTRGVRAVEPVS
                     ESMVSAQLTALAEDLPPAALKTGMLAEALLVRLVARAIRENGWNNLVVDPVMVSTSGA
                     RLLTSEAEEVLREDLLPLASLVTPNLDEAALLTGRVVHDPSTMERAGATLLRFGAGAA
                     LVKGGHLSSETIVDVLVTPAGIRRFTHQRIDTSSVHGTGCTLSAAITAGLALGRSLDD
                     AVEAGLEFVHRAIAEAPGLGGGFGPLNHTVAAPRADE"
     gene            complement(752..>1137)
                     /locus_tag="VFD73_10080"
     CDS             complement(752..>1137)
                     /locus_tag="VFD73_10080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HZI74353.1"
                     /translation="VLEGEERFPDMSQPYDAELRRLARDAALEQKVAVDEGVYVQLLG
                     PSFETPAEIRMLDRLGADAVGMSTVIEVIAARSRGIRCLGFSLITNLASGLSATKLSH
                     AEVMETANRVQGELGALVEAVIRRL"
BASE COUNT          189 a          380 c          364 g          204 t
ORIGIN      
        1 gactccggcg gaggcgccgg gatccaggcc gacctcaaga cattccagca gttcggcgtg
       61 ttcggtacat cggtcatcgt ggcactcacc gcccagaaca cgagaggagt gcgggcggtc
      121 gagccggtct ccgaatccat ggtgagcgca cagctcaccg cgctggccga ggatctcccg
      181 ccggcggcac tcaagaccgg gatgctggct gaggcgctgc tggtccgttt ggtggcgcgg
      241 gccatccgcg agaacggctg gaataatctg gttgtcgacc cggtcatggt gtccaccagc
      301 ggggcccgtc ttctcacgag cgaggcagag gaggtgctac gagaggatct gttgcctctg
      361 gcatcactgg tcactcccaa tctcgacgag gccgctctcc tcactggccg cgtggtccac
      421 gatccctcta ccatggaacg cgccggtgcc accctgcttc gcttcggggc cggcgccgct
      481 ttggtcaaag gcggccatct ctcgtccgag accattgtcg acgtgctggt gactcccgcg
      541 ggaattcggc gctttaccca ccagcggatc gataccagct cagttcacgg aaccggttgc
      601 acactgtcgg ctgcgatcac ggccgggctc gcgctgggac gttccctgga tgatgcagtc
      661 gaagctggtc tcgagttcgt gcatcgtgcc attgcggagg cgccagggct gggcggcggt
      721 ttcggaccgc tgaaccacac ggtagccgcg cctagagccg acgaatgacc gcctcgacca
      781 gggctcctaa ctctccctga acccggtttg ctgtctccat cacctccgcg tgactcagct
      841 tggtggccga gagtcccgag gcgaggttgg tgatcagtga gaaaccgagg caccgaatgc
      901 cgcgggaccg ggcagcaatc acctcgataa cggtcgacat gccgacggca tcggcgccca
      961 gacggtccag cattctgatc tcggccggcg tctcgaagct ggggccgagc agctggacgt
     1021 agactccttc gtccacggcg accttctgct ccagtgccgc atcccgcgcc agccggcgaa
     1081 gctcggcatc gtacggctgc gacatgtcgg gaaagcgctc ctccccttcc agcaccg
//
LOCUS       DASRPQ010000889         1321 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2925555, whole genome shotgun sequence.
ACCESSION   DASRPQ010000889 DASRPQ010000000
VERSION     DASRPQ010000889.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1321
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2925555"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1283)
                     /gene="hemL"
                     /locus_tag="VFD73_10085"
     CDS             complement(<1..1283)
                     /gene="hemL"
                     /locus_tag="VFD73_10085"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: protein motif:HMM:NF000818.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HZI74354.1"
                     /translation="MSGVRLVGRTTAASERLLEVAQRLLPGGVNSPVRAFHAVGGIPR
                     FIARGEGPMLIDADGNRYLDLVLSWGPLILGHAHPEVVAAIVDTARKGTTFGAPTELE
                     VRLAQRVVETFPSIEMVRFVSSGTEALMSAVRLARAATKRKLIVKFDGCYHGHADALL
                     AAAGSGVATLGLPDSPGVTGATVADTLVVAFNDLAAVETLFAARGSEIAAVLIEPVAG
                     NMGVVPPVSGFLRGLRELTRRYQSLLVFDEVMTGWRVHPQGAQVLYDIHPDITCLGKV
                     IGGGLPAAAYGGSRELMELIAPAGPVYQAGTLSGNPLAMAAGLATLDALAQPGTWQRA
                     ADWAERADTLITGAAERAGVPVTVQRVGTMFTPFFSETPVRTFAEAKRSDREAYRRFF
                     HAMLESGIYFPPSAFEASFSSTVHGAAELDMLESAL"
BASE COUNT          242 a          436 c          438 g          205 t
ORIGIN      
        1 agggcggatt ccagcatatc cagctcggcg gcaccatgga ctgtcgagct gaaggaggcc
       61 tcaaaggctg aggggggaaa atagatcccg ctctccagca tggcatgaaa gaatcggcgg
      121 tacgcctcgc gatcagagcg cttggcttca gcgaatgtac gcaccggcgt ttcggagaaa
      181 aacggggtga acatggtgcc gacccgctgc acggtcaccg gcactccagc tcgctccgct
      241 gcacccgtaa tgagcgtgtc agcgcgttcg gcccagtcgg ctgcccgctg ccaggttccg
      301 ggttgggcga gagcatccag cgtcgccaga ccggcggcca tggccagagg atttcccgaa
      361 agcgttccgg cttgatagac cgggccggcg ggggcgatga gctccatcag ttcccgcgag
      421 cctccgtacg ctgcggccgg caggccgcct ccgatgacct tgccgaggca ggtgatatcg
      481 ggatggatat cgtagaggac ctgcgctcct tgcgggtgca cccgccagcc ggtcatcacc
      541 tcatcgaaca cgagcagcga ctgatagcgc cgggtgagtt cccggaggcc gcggaggaac
      601 ccggagaccg gtgggacaac acccatgttg cccgcgaccg gttcgatcag caccgcggcg
      661 atctcggagc cgcgtgccgc aaacagcgtc tccaccgccg cgagatcgtt gaaggcgacg
      721 accagggtgt cggcgaccgt tgcacccgtg actccaggag aatcgggcag gccgagggtt
      781 gcgacgccgg agccggcagc cgccagcaga gcatcggcgt gaccgtgata gcagccgtcg
      841 aacttgacga tcagcttgcg tttggttgcg gcccgagcca ggcgcacggc actcatcagc
      901 gcctcggttc ctgagctcac gaatcgaacc atctcgatgc tgggaaacgt ctccaccacc
      961 cgctgggcca atcgaacctc cagctcggtc ggggccccga acgtcgttcc cttccgagcc
     1021 gtgtcgacaa tcgcggccac cacttccgga tgcgcgtgtc ccaggatcag cggtccccag
     1081 gaaagcacca gatcgaggta gcggttgccg tcggcgtcga tgagcatggg gccttcgccc
     1141 cgggcgatga accggggaat gccgcccacg gcatggaagg ctcggaccgg gctgttgacg
     1201 cctcccggca agaggcgctg cgctacttcg agcaggcgct ccgatgccgc ggtcgtccgg
     1261 ccgacgaggc gaactccact catgcgagat cgctgctccg gagccatacc gcagcgtcct
     1321 t
//
LOCUS       DASRPQ010000890         1609 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_420212, whole genome shotgun sequence.
ACCESSION   DASRPQ010000890 DASRPQ010000000
VERSION     DASRPQ010000890.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_420212"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(76..630)
                     /gene="pth"
                     /locus_tag="VFD73_10090"
     CDS             complement(76..630)
                     /gene="pth"
                     /locus_tag="VFD73_10090"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: protein motif:HMM:NF013368.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HZI74355.1"
                     /translation="MGLGNPGPEYHDTRHNAGFRLADRLVDRWQLGPFRHGDRNRVAQ
                     GSWQGRPVVVLKPQTYMNRSGAAIAPLRDQPEFDPSQHLLVLVDDVALPVGRFRLRGA
                     GSAGGHNGLKSVEGTLQRQDYARLRIGVGPAPPDLDDLADFVLDRFTPEEAETIGQLL
                     DPMSEAVECWLEHGVEKAMNQFNR"
     gene            complement(645..1313)
                     /locus_tag="VFD73_10095"
     CDS             complement(645..1313)
                     /locus_tag="VFD73_10095"
                     /inference="COORDINATES: protein motif:HMM:TIGR00731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HZI74356.1"
                     /translation="MAQQANLQAVTRPETGKGAARSLRRQGKVPGVIYGHNRTPEPLA
                     IDSAALSKMLIGISAGTTVFDVVVDGRPAVKALIREIQRDSVRPAEILHLDLYEVRAD
                     EKVTLSIPIHLVGIPDGVRNFGGVLDHSLRELEIEVLPADIPEHVELDVTALAIGHSL
                     FVRDLKVEKAEILNDPDTPVCSVVAPRTEEAPAPVEEVAVTAEPELIRKPKPEAEAEA
                     EPKP"
     gene            complement(1390..>1609)
                     /locus_tag="VFD73_10100"
     CDS             complement(1390..>1609)
                     /locus_tag="VFD73_10100"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682708.1"
                     /note="catalyzes the formation of 5-phospho-alpha-D-ribose
                     1-phosphate from D-ribose 5-phosphate and ATP; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HZI74357.1"
                     /translation="EDVYCCATHALLSGPAVDRLMASGVKEVAVTNTIAIPPERRFDR
                     LKVLSIAGLLAKAIGYTHSDQSVSSLFD"
BASE COUNT          277 a          520 c          509 g          303 t
ORIGIN      
        1 ttgccgacgt tgggcagccc cacgattcca agtctgagca tgggtcagga gtagggaaga
       61 agtcgagtca ggcactcacc gattgaactg attcatcgcc ttctctacgc cgtgctcgag
      121 ccagcactcc accgcctcgc tcatgggatc gagcagctgc cctatggtct cggcttcctc
      181 cggagtgaac cggtccagaa caaagtcggc gagatcgtcc aaatccgggg gagcggggcc
      241 aaccccgatg cgcaggcggg cgtagtcctg ccgctggaga gtgccttcca cgctcttcaa
      301 tccattatga ccacccgccg agccggctcc ccgaagccga aagcggccga ccggcagtgc
      361 cacatcgtct accagaacca ggaggtgttg gctgggatcg aactcgggct ggtctcggag
      421 cggagcgatg gccgctccac tccggttcat ataggtctgg ggtttcagca ctacgaccgg
      481 acgcccttgc cagcttccct gggctacccg gttcctgtcg ccgtgccgga atggtcccag
      541 ctgccaacga tcgaccagcc ggtcggcgag gcgaaaccct gcgttgtgtc gagtgtcgtg
      601 gtactccggg ccgggatttc ccagccccac gatcgcgtac aggctcaggg tttgggctcg
      661 gcctcggctt cggcctcggg cttgggcttc cggatgagct ccggctccgc cgttaccgca
      721 acttcctcta ccggcgcggg ggcctcttca gtccgcggcg ccaccacgct gcagaccggc
      781 gtatcggggt cgttcagaat ttccgctttc tcgaccttga gatctcggac aaacagcgag
      841 tgtccgatcg ccagggcagt gacatcgagc tcgacatgtt ccgggatgtc cgccggcagc
      901 acctcgatct cgagctcgcg cagcgagtgg tcgagcacgc cgccgaagtt ccggacgcca
      961 tcggggatgc cgacgagatg gatcggaatc gagagcgtca ccttctcatc ggcccgcacc
     1021 tcatagaggt ccagatgcag aatttccgcg ggacgaacgg aatcgcgctg gatctcgcgg
     1081 atgagagcct ttaccgccgg gcgtccatcg acgacgacgt cgaaaacggt ggttcccgcg
     1141 ctgatgccga tcagcatctt gctcagcgcg gccgagtcga tcgccagcgg ctcgggcgtg
     1201 cgattgtgac cgtagatgac gccgggcacc ttcccctgtc ggcgaaggct ccgggcggcg
     1261 cccttgccgg tctcggggcg ggtaaccgct tggaggtttg cttgctgggc cattggttcc
     1321 tctagttccg agtcatgagt cacgagtcac gaggtgtcgg cgcttccgcg gctcgtgacc
     1381 catggctacc taatcaaaca acgagctcac cgactgatcg ctgtgggtgt atccaattgc
     1441 cttggccaga agcccggcga tggagagcac cttgagccgg tcgaaccggc gttcgggcgg
     1501 aatggcgatc gtgttggtga ctgcaacctc cttcacaccg gaggccatca gccgatctac
     1561 cgccggcccg gacagcaggg cgtgggtggc gcagcaatac acatcctcc
//
LOCUS       DASRPQ010000891         1072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1992231, whole genome shotgun sequence.
ACCESSION   DASRPQ010000891 DASRPQ010000000
VERSION     DASRPQ010000891.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1992231"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          180 a          363 c          330 g          199 t
ORIGIN      
        1 gcgaatgttg tcagcctgcc ccagccagcc atgaggcgcc gggcgcggca ccgcagagaa
       61 tccatgtccc ccccagggat tgtcttgccc aaataggcgg cccgcttgtt gcgcactcag
      121 ccccggccgc taccccatgg cctgcacagc tgactctggc ccctgcgcta cggcgcgcgg
      181 cctgatcccc cggcacccac ggattcgagt agctgttcag ctacgctcct ccccccagac
      241 tctggtgtca acatcggaac ccttccaatc ttgggccgat gaccaccccc gacctcgatc
      301 gccacaccca ccgcggaccc ggcgcagcag gagccgcgag actacggtgg caggaagtaa
      361 cagcactaca ccgactgcca accggtccct cgatgcgaac tcctggcgtg gaggtcgttg
      421 acggtcgttg gggcaggtca cccgtccggt gacagcttgt cggaggtgtt cgcggtcgtt
      481 ggcgttgctg tacttctgtg ctgtacggcg cttggcttcg gcgggatgcg gcctggccct
      541 gtccgtgcgt cagcgtgagc ccacgcctgc ctgatcatcc cgtcgccgtc gacccgcccg
      601 atcggggagc gggccaggcc cacggggtca atgtggagca ccccatcggc tgaacgacct
      661 tgaccccgtg ggcctggcct gctcggcttg cccggggcga tggcggcgag atgatcaggc
      721 cacatcagcc accatcgaca tcccgagggt ttgctgcctc atcctggagc cggagcgccc
      781 ccgccggagg cgaatcgagg ctaacggctt cggaggcagt tggccgttag tgcgccccac
      841 ctgcgagccg atctgccgct aatggtggga gccaactaag gtcgctgggg caggtcagaa
      901 ggtcatatcg ggtcggtgaa ggtcagatat aagtcggcct ggttgccgga ttttgctgtt
      961 gcacctttca accgcttagt tcagcaactt gacaagtcaa cagcgtgacc tagatctggc
     1021 cacccgcaca gttagctatg accatgccgc atgacccagt ctaatgggct tt
//
LOCUS       DASRPQ010000892         1084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1992364, whole genome shotgun sequence.
ACCESSION   DASRPQ010000892 DASRPQ010000000
VERSION     DASRPQ010000892.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1992364"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..396
                     /locus_tag="VFD73_10105"
     CDS             <1..396
                     /locus_tag="VFD73_10105"
                     /inference="COORDINATES: protein motif:HMM:NF014907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74358.1"
                     /translation="ASNSLLEGLVFSDRAGRSLAGKLRSKVGVVSPTPSADARDTGAD
                     AQYEGIRQEMREVMTADDGLQRSEESLLHAERELERLAGATPPEAWRTHNQLLVAGLI
                     TRAARGRRESRGGHRRTDYPPDSVAREAV"
     gene            399..>1084
                     /locus_tag="VFD73_10110"
     CDS             399..>1084
                     /locus_tag="VFD73_10110"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase"
                     /protein_id="HZI74359.1"
                     /translation="MPTSNGGATLALPVIENPGQTPEEIAALQAEIKQLARSRNAVLL
                     AHNYQRPEIQDVADYVGDSLGLSRQAAATPADVIIFCGVHFMAETAAILSPRKRVLLP
                     DLRAGCSLAATITAEDVRRWKAEFPGYIAVGYVNTTADVKAELDYCCTSGNVVDVIDA
                     IPADKGILFLPDFFLGSHVRRMRPDRRIEVWMGECHVHKGIRPDVLNQARADYPEAEV
                     LVHPECGCAG"
BASE COUNT          199 a          347 c          358 g          180 t
ORIGIN      
        1 gcttcgaatt cactgctgga gggtctggtc ttttccgacc gtgcggggcg ctcgctggcc
       61 ggcaagctcc gctccaaggt tggcgtagtg agccctactc catctgcaga cgctcgcgac
      121 accggagccg acgcccaata cgaaggtatc cgtcaggaaa tgcgggaggt catgaccgcg
      181 gacgacggat tgcaacgcag cgaagagtcg ctgttgcacg ctgagcgcga gctggagcgt
      241 ttggccggcg cgacaccacc ggaagcctgg cgcacccaca accagctcct ggtcgcggga
      301 ctgatcacca gggcggcgcg gggtcggcgg gagagccgag gcggccaccg tcgaaccgac
      361 tatccacccg actcggtcgc ccgggaagcg gtatgagcat gccgacatcg aacggtggag
      421 cgacgctggc gctgccggtc atcgagaatc ccgggcagac gccggaagag atcgcggccc
      481 tgcaggcgga gatcaagcag ctggcgcggt ccagaaacgc agtccttctg gctcacaact
      541 atcagcggcc tgaaatccag gatgtcgccg actacgtggg ggattcgctg ggcctctccc
      601 gccaggccgc ggccacgccg gcagacgtca tcatcttctg cggcgtgcac ttcatggccg
      661 agaccgccgc aattctctct ccccggaaac gggtgttgct tcccgatctt cgcgccggct
      721 gctcgcttgc cgcaacgatc actgccgagg atgtgcgtcg ctggaaggcg gagtttcccg
      781 ggtacattgc ggtcgggtac gtcaacacaa ccgccgacgt caaagccgag ctggattact
      841 gctgcaccag cggcaacgtc gtcgacgtga tcgatgcgat tccggccgac aaggggattc
      901 tgtttctacc ggatttcttc ctgggaagcc atgtccggag gatgcgtccc gaccggcgga
      961 tcgaggtctg gatgggagag tgccacgttc acaaaggaat ccgacccgac gtgctgaacc
     1021 aggctcgggc cgactacccc gaagccgagg tgctggtcca ccccgagtgc ggctgcgccg
     1081 gtca
//
LOCUS       DASRPQ010000893         2568 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4505499, whole genome shotgun sequence.
ACCESSION   DASRPQ010000893 DASRPQ010000000
VERSION     DASRPQ010000893.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2568
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4505499"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(279..971)
                     /locus_tag="VFD73_10115"
     CDS             complement(279..971)
                     /locus_tag="VFD73_10115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74360.1"
                     /translation="MSRTDILTRYRRLRQISKQQHEAVLDIIAPDVLLDWARRLGLTV
                     GKTVVLENDTELTLPEDLAIYLPRLGHSHPLERYARLAPFAPGSDEAIVLAAMRQARF
                     SLWRIERRHPITGLILRDLLRDEETWLVDEAMAKNAPPGVAMAARLLQPESFAMTARI
                     IVPVLPDLMPLPDLMDEVLTRAPALKRLQGDGLARDPRFAIGIYRAAVATGAMERVRF
                     KHKRASFLWTDA"
     gene            1139..2542
                     /locus_tag="VFD73_10120"
     CDS             1139..2542
                     /locus_tag="VFD73_10120"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI74361.1"
                     /translation="MAKIDASRSPRTMEMWLLPFAAMFTRPSWLNAVALASGALLCLN
                     RRTVCAALRAMDGAADKGFSRFHRFLSCAQWSGLQGAKILLGLLQEAFVPEGEALVIG
                     VDDSVERRRGAKIRDKGIWRDAVRSSRSVFAKTAGLRWLSLQVMVRPGFARRTWGLPF
                     LTILSRSEQVDARRQRRHQTLPEKATWALRLVARWCPGRRLVVVADGAYASLDLFWTL
                     RERVVCVARCRMDARFFNPPPPRKKGQKGRPRVVGTRQLTPRTRAVRKATKWARMTVP
                     GWRTKDGKTERDVDVATSTALWSAHGKTMPVRWVLTRDPTGRAETRVFVCSDPDQSAL
                     QILTWYAMRWAVEPTFQEARRHLGFETQRQWSDLAIHRTTPLLLGLFSLVTLWAADQA
                     ARAGKLAVLGAAWYRKPDPTFADCLAVVRQMLWAEEAVSPILWRDDYPTWRARARTAE
                     KPRPLQQRLAELMSYAA"
BASE COUNT          417 a          801 c          901 g          449 t
ORIGIN      
        1 tgagcaacaa cagccgcagt tcatacttgt caagcttcgc gctgtggcgg aggccatgga
       61 ggatcttcaa ggctttttcg gtatgattca acgcttccaa attggcagat cgcgagaccg
      121 actcttctgc agatttgagt aaatatttca atgccttttc gtcttgcccc gcatctatgc
      181 aggcgcgggc aattctctcc ggttcgtttg cgactatgtc cggaaactga tgctcaagtg
      241 tagttacctg gactttggcg ctttttgatg ggtggaggtc atgcgtccgt ccacaggaag
      301 ctggctcttt tgtgtttgaa tcggacgcgc tccatggctc ccgtggccac ggcggcgcga
      361 tagatgccaa tcgcgaagcg cgggtccctg gcaagaccgt ctccctggag acgcttcaac
      421 gcaggtgccc tggtgagcac ctcgtccatc aggtccggca gtggcatcag gtccgggaga
      481 accggcacga tgatgcgggc ggtcatcgcg aaactctccg gctgcaggag acgcgccgcc
      541 atcgccacgc ccggtggcgc gttctttgcc atggcctcgt cgaccagcca ggtctcttcg
      601 tcgcgcagca gatcgcgcag gatcagaccc gtgatcgggt gccgccgctc gatgcgccag
      661 agcgagaacc gcgcctggcg catggccgcg agcacgatgg cctcgtcgga gccgggtgcg
      721 aacggtgcga gccgggcgta gcgctcgagc gggtgtgaat ggcccagcct ggggaggtag
      781 atggccagat cctccggcag cgtcagttcg gtgtcgtttt ccagcacaac cgtcttgccg
      841 acggtcaggc cgagccgcct ggcccagtcg agcaggacgt ccggcgcgat gatgtccagc
      901 accgcctcgt gctgctgctt gctgatctga cgcaggcggc ggtagcgggt caggatgtcg
      961 gtgcgcgaca tcggcggcga ccctggtgag gacgccgggc tgagagggaa ctgtcgcgcg
     1021 cgcagacgcg cggtaaccgg ggtgagcagg cggcgcagcg gccctggtga cgacccaacc
     1081 attccccatc ctcctgtctc gagacgaggc acggtatggc ctgacgaggg aggcagccat
     1141 ggcgaagatc gacgcatccc gcagcccccg aacgatggag atgtggctgc tgccgttcgc
     1201 ggcgatgttc acgcggccct catggctgaa cgcggtggcg ctggcgagcg gcgcgttgct
     1261 gtgcctgaac cggcggacag tgtgcgccgc tctgcgggcg atggacggtg ccgcggacaa
     1321 ggggttcagc cggttccacc ggttcctctc gtgcgcgcag tggtcgggcc tgcagggggc
     1381 gaagatcctg cttggcctgc tgcaggaggc attcgtgccg gagggcgaag cgttggtgat
     1441 cggtgttgat gattccgtcg agcggcggcg cggtgccaag atccgcgaca aggggatctg
     1501 gcgcgacgcg gtgcgctcga gccgcagcgt cttcgccaag accgcaggcc tgcgatggct
     1561 gtcactgcag gtgatggtca ggcccggttt cgccagacgc acatggggct tgccgttcct
     1621 gacgatcctg agccgttccg agcaggtcga tgccaggcgg cagcggcggc accagacact
     1681 gccggagaag gccacctggg ccctgcggct ggttgcccgc tggtgtccag gccgccgcct
     1741 ggtggtggtg gcggacggcg cctacgccag cctggacctg ttctggacgc tgcgagagcg
     1801 cgtggtgtgc gtggcgcgct gccgcatgga cgcgcgcttc ttcaacccgc cgccgccgcg
     1861 caagaaaggc cagaaaggca ggccgcgggt ggttggcacc cgccaactga cgccacggac
     1921 gcgggcggtg cgcaaagcca ccaagtgggc gcgcatgacc gtcccgggat ggcggacaaa
     1981 ggatggcaaa acggagcggg acgtcgatgt cgcgaccagc acggcgctgt ggagcgcgca
     2041 cggcaagacc atgccggtgc gctgggtgct gacccgcgac ccgaccgggc gcgctgagac
     2101 acgtgtgttc gtctgctccg acccggatca gtcagccctg caaattctga cgtggtatgc
     2161 gatgcgctgg gcggtcgagc ccaccttcca ggaagcgcgg cgccatctcg ggttcgagac
     2221 ccagcggcag tggtcggatt tggccatcca ccgcaccacg ccgttgctgc tcggtctgtt
     2281 ctcgctggtg acgctgtggg cggctgatca ggccgcacga gctggcaaac tcgcggtgct
     2341 cggcgctgcc tggtaccgca agccggatcc gacgttcgcc gactgcctcg ccgttgtcag
     2401 gcagatgctg tgggccgagg aggcggtgag cccgatccta tggcgggacg attatccgac
     2461 ttggcgcgca cgcgcacgaa ccgccgaaaa gcccaggccc ctccagcaac gtctggcaga
     2521 gctgatgtcc tacgccgctt gacctcccac aaaagggcta aagtccag
//
LOCUS       DASRPQ010000894         1333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1358883, whole genome shotgun sequence.
ACCESSION   DASRPQ010000894 DASRPQ010000000
VERSION     DASRPQ010000894.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1358883"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..363
                     /locus_tag="VFD73_10125"
     CDS             <1..363
                     /locus_tag="VFD73_10125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74362.1"
                     /translation="APPEETSPMEIELLRDRVSRSLEHLFTLLSLVLPQGTLRLAFHA
                     LHTDDPHLRGTALEYLETVLPEPVWRKLWPLIQPGEMPTRQPRPSGEALRDLLRSQET
                     ISVALSQIRKAAQSNPSP"
     gene            458..>1333
                     /locus_tag="VFD73_10130"
     CDS             458..>1333
                     /locus_tag="VFD73_10130"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HZI74363.1"
                     /translation="MGTLNLEQKLDLLMSLATDDREGLPPRLQHTKAVGALRPLNIRQ
                     LRPLPGTRMSLLRILMTNACSYNCHYCPMRRDRPMPRTLLKPEELVRIFLGAHQRGWC
                     EGLFITTGIPGRPLKVMDDLIEVLELLRERHRFAGYIHVKLVAGGETAQIDRLTALAS
                     RVSLNFEAPCGPSLAQIAPEKSFSTTLHDFERVRKLIVMEREAQAYGKPKDPLHPGGT
                     AGMTIQFVVGATRDTDQMLLSTISQLRAGGGLHHPHFSAFRPISNTPLENAPAAPALR
                     EHRLYQAAYLMRDYGF"
BASE COUNT          259 a          444 c          386 g          244 t
ORIGIN      
        1 gcaccacccg aggagacctc cccgatggaa atcgagctcc tgcgcgatcg ggtgagccga
       61 agcctggaac atctcttcac cctgctgtcg ctggtattgc cgcaaggcac gctccggctg
      121 gcgtttcatg cgctccatac cgacgatccc catcttcgcg gcacggcgct cgagtatctg
      181 gaaacagttt tgccggagcc ggtctggcga aagctgtggc ccttgattca accgggcgag
      241 atgccgacgc gacagccgag gccatctggc gaagcactcc gcgatttgct ccggtcccag
      301 gaaaccatca gcgtagcgct gtcccagatt cgtaaagcag cgcagagtaa cccttctcct
      361 tagctcaccg gctggccctg gtggacatcc ctttccctgc tcttgtattt cggtctttct
      421 tcgggtacac tgggaaagaa ccttccacga gggcggcatg ggcactctca acctggaaca
      481 aaagctcgac ctcttgatgt cgcttgccac ggatgatcgc gaaggactcc caccgcgtct
      541 gcagcacacc aaagcggtcg gcgccttgcg gccgttgaac atccggcagc ttcggccgct
      601 tcccggcacc cgaatgtcgc tgctccgcat cctcatgacc aacgcctgca gctacaactg
      661 ccactactgc ccaatgcgcc gcgatcggcc gatgccgcga acgctgctga agccagagga
      721 gctggtgcgc atcttcctcg gcgcccacca acgcggctgg tgtgagggac tgttcatcac
      781 caccggaata ccgggacggc cactcaaggt gatggatgat ctgatcgagg tgctggagct
      841 actccgggag cggcaccggt tcgcgggata tatccacgtg aagctggtcg ccggtggcga
      901 gactgcgcag atcgatcgac tgacggcgct ggccagccga gtctccctca acttcgaagc
      961 accctgtggt ccgagcctgg cgcagatcgc gccggagaag agcttctcca ccacgctgca
     1021 cgatttcgag cgggttcgga agctgatcgt gatggagcgc gaagcccagg cgtatggcaa
     1081 gccaaaagac ccgctccatc ccggtggcac ggcaggcatg accattcagt tcgtagtggg
     1141 agccacgaga gataccgacc agatgttgct cagcaccatc agccagctgc gagccggagg
     1201 tggccttcac catccacact tcagcgcctt ccgtcctatc agcaacaccc cgctggaaaa
     1261 tgcgccggcc gcgccggccc tacgcgagca tcggctctac caggccgcat acctgatgcg
     1321 ggactacggc ttt
//
LOCUS       DASRPQ010000895         1208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_735203, whole genome shotgun sequence.
ACCESSION   DASRPQ010000895 DASRPQ010000000
VERSION     DASRPQ010000895.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1208
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_735203"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1208
                     /locus_tag="VFD73_10135"
     CDS             <1..>1208
                     /locus_tag="VFD73_10135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74364.1"
                     /translation="LGASRLDGTEGGSGPFWSPDGEALAYFGGGQLRVIDLRSGSRRA
                     LCPASSRPGGGTWTPSGIIVYSGDFLSVPLFQVPATGGSCTPASRYRPGESVHRRPSA
                     LPDGRHVLFNNGRTGTTSIVVLDLISGKLTDIRSGGGDAQFAPPDWVLFREGPVGPLY
                     AQHFDLKSLHLVGQPRAVLDRVVGVRTLPSYAASSNVLVALQINPGQLTLVWVDRRSV
                     IVDSVRAPTLPAPYFGASSVALSHNGRRVAFTSAGPLWIYDRDRNVATQAHTGIVPGQ
                     GILEPAWDPGDSLIAYRTLFTGNLTLRLHHLSNDTSDSLFTMGFRNFRTPDWSPDGRK
                     IAFQLSAGDSVPNDEIWIYSLADRRAVRAWPSTGNLSSPRWSPDGHWLAYVSDETGGP
                     EVYIRALSGG"
BASE COUNT          199 a          390 c          372 g          247 t
ORIGIN      
        1 cctgggtgcc agccgtctgg acggaactga aggcggctcg ggacccttct ggtctcccga
       61 tggtgaggcg ctggcctatt ttggcggggg acaacttcgg gtcatagatc tgaggagtgg
      121 cagccgccgg gcgctttgcc ccgcgtcatc ccgtcccggc ggcggcacct ggaccccgag
      181 tggaatcatt gtctactcgg gtgattttct cagcgtcccg ttattccagg ttcccgccac
      241 cggaggctct tgcactcctg cgagccgcta tcgcccgggc gagtccgtgc accggcgtcc
      301 ttccgctcta ccggatggca ggcacgtact ctttaacaat ggccgcaccg gtaccacgag
      361 cattgtggtg ctcgatctaa tcagcgggaa actcaccgac atcaggtccg gcggtggtga
      421 cgcgcagttt gctccacccg attgggtgct ctttcgcgaa ggaccggttg ggcctctcta
      481 cgcccaacat ttcgacctca aatcgcttca tctcgtcggc cagccgagag cagtgctgga
      541 tcgggtagtc ggcgtccgga cactgcccag ctatgccgcg agctcgaacg tgctggtggc
      601 gctccagata aacccaggtc aactcacact cgtctgggtg gacagacggt cagtaatcgt
      661 ggactcggtg cgggctccca cgcttcccgc tccgtacttc ggcgccagca gcgtcgcgct
      721 gtcacacaac ggaaggcggg tagcgttcac ctcagcgggc cccctctgga tctacgaccg
      781 ggaccggaac gtcgcgaccc aggctcacac cgggatcgtt ccggggcaag ggatcctgga
      841 gcccgcctgg gatccgggtg attcgcttat cgcatatcgg actctgttca ccggcaacct
      901 gacgctgcgg cttcatcacc tgagcaacga tacgtcggac tcattgttta ccatgggctt
      961 ccgcaatttc agaactcctg attggtcgcc ggatggccgg aagattgcct tccagctctc
     1021 tgccggagac agcgtgccga acgatgagat ctggatctac tcgctggccg atcgcagagc
     1081 tgtgcgcgcg tggccgtcta ccgggaatct ctcctccccc cgctggtcgc cggacgggca
     1141 ctggctggcg tacgtttcgg acgagaccgg tggtccagag gtttacatca gagcgctatc
     1201 cggcggag
//
LOCUS       DASRPQ010000896         1452 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2299242, whole genome shotgun sequence.
ACCESSION   DASRPQ010000896 DASRPQ010000000
VERSION     DASRPQ010000896.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1452
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2299242"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..>1452
                     /locus_tag="VFD73_10140"
     CDS             141..>1452
                     /locus_tag="VFD73_10140"
                     /inference="COORDINATES: protein motif:HMM:NF014428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HZI74365.1"
                     /translation="MIHKSAGFPMPGPPGRCLAVSLIVALVVSGCGGEDAGCNGPFCQ
                     SPPVRPEASSIQPGQNNGQQGAPGRELPKPIDVMVTDSGGHPVSGVTVSFSVSGDGGT
                     LSSSTAQSDVNGLASVRWTLGSQLGSQSLRAEASNEGGKPLNNSPLLLSAMAVQPQPA
                     GLVLLTTLAETAQNGVVLVNQPVVQVFDADSQPLSQVEVVASVGSGGATLSGTATATS
                     DASGQATFTDLALVGPQGPQTLKFSVTTPALEITSGPIQLLAGTAASLTGVEPLSYQG
                     TVNSPVAPGPSVIAKDAVGNPVAGVSVTFASNRDASVSPETAVTNEQGLAQVSWTLGS
                     TANVQYSLTARVESSSLPAVRFSATAQAGAAGRLTVAVQPSSPTQSGIPFAQQPAIQV
                     ADQNGNPAAQAGVTVTATISSGPSGSLQNSTAVTDASGRAAFTGL"
BASE COUNT          274 a          466 c          454 g          258 t
ORIGIN      
        1 ggcgctttgg ctacttgacg gtggcttgat cgctgccccc actgttcccc ggcggtaaga
       61 tcgcaagaga cgaggccgca acgtgatgca agtcacaaac ttgacagttg ctccgggaga
      121 gggatactaa gcttctagat atgatccaca aatctgcggg ctttcctatg ccaggccccc
      181 cgggacgctg cctggcggta tcgctgatcg tggcgctcgt ggtgtccggg tgcggcggcg
      241 aggacgccgg ctgcaacgga cctttctgcc agagtccacc ggtgcgcccg gaagccagca
      301 gcattcaacc tggccagaac aatggtcagc agggagcgcc aggccgggaa ctcccgaagc
      361 cgatcgatgt catggtcacc gacagcggcg ggcacccggt ctccggggtc accgtaagct
      421 tttcggtaag tggggacgga ggtacgctct ccagttccac cgcccagtcc gacgtcaatg
      481 gactggcgag cgtcagatgg acgctgggca gccagcttgg aagccagagc ctcagagcag
      541 aagccagcaa tgagggcggc aagccactga acaactctcc gctcctgctc tccgccatgg
      601 ctgttcagcc gcagccggct ggcttggtgc tcctgacaac gctggctgag accgctcaga
      661 acggtgtggt cctggtcaac cagccagtgg tgcaggtgtt cgacgccgac agtcagccgc
      721 tgtcccaggt cgaagttgta gcatcagtcg gctctggtgg cgcaaccctt tccggcaccg
      781 caacggcgac atctgacgcc agcgggcaag ccacctttac cgatctggcg ctggtgggtc
      841 cgcaaggacc tcagaccttg aagttcagtg tcacgacacc tgcgctcgag attacttcgg
      901 gacccattca acttctcgcc ggcaccgccg cgagtctcac cggcgtagag cccctatcct
      961 accagggcac ggtgaattcg ccggtagcgc ccggaccttc ggtgattgca aaggatgctg
     1021 ttggaaaccc cgtcgcgggc gtgtcggtga ccttcgcttc caatcgagac gcgtcggtct
     1081 cccccgaaac cgcggtcacc aacgaacagg gtctcgcgca ggtgagttgg acgttgggca
     1141 gtacggcgaa cgtccagtat tcgctgacag cccgggtcga gagctcctca cttccggcag
     1201 ttcggttctc ggcgacggcc caggccggcg ctgctggaag gctgacggtg gcggtgcaac
     1261 cctcgtctcc cactcagagc ggcataccgt tcgcacagca gccggcgatt caggtggcgg
     1321 accaaaacgg caatccagcc gctcaggctg gcgtgactgt gacagccaca atctcctcgg
     1381 gaccctcagg tagcctgcag aactccaccg cagttaccga tgcgagtggc agagcggcat
     1441 tcaccggcct ga
//
LOCUS       DASRPQ010000897         1436 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4505897, whole genome shotgun sequence.
ACCESSION   DASRPQ010000897 DASRPQ010000000
VERSION     DASRPQ010000897.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1436
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4505897"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            260..679
                     /locus_tag="VFD73_10145"
     CDS             260..679
                     /locus_tag="VFD73_10145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74366.1"
                     /translation="MTTADLLACLEQVTGKINYEQFRTWVVAQSIRNALEPFHGSPAF
                     DPDNPASGEGFISDDQMRVLNIAIRRATHEALSQVDMAHRAVLQSRLRELRTEEQEAL
                     DFCGFQLRTIGAYMEPPGSPELEKAYQRYISEPDVNR"
     gene            complement(703..981)
                     /locus_tag="VFD73_10150"
     CDS             complement(703..981)
                     /locus_tag="VFD73_10150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74367.1"
                     /translation="MNNDAKGKTRPQIRSGPLITGAVLVGAGTFFVLIGLAVGSSHLL
                     SVTRQRVREMEVPPNELAKQKYAQARAAVAAGTVAWQNGIPTQAASVS"
     gene            1188..>1436
                     /locus_tag="VFD73_10155"
     CDS             1188..>1436
                     /locus_tag="VFD73_10155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74368.1"
                     /translation="MKAVAVAVPARRPRSSTLWRVAPHVGPYFGRGSHWTTSEDSARG
                     LHCWLEETSPVRRAIYRAEVQLTDVFEAPPGILLRLSEV"
BASE COUNT          257 a          475 c          453 g          251 t
ORIGIN      
        1 ctgctcgcgg tcattcttag gcattgcgaa tgatggcccg ggccagtctc gtgactacgg
       61 cgcaagttgt gacaatcatg attacggtgc tggtcccgat cagggtcgcg ggctcgaggc
      121 atcaagcgaa ggttccgcat gagccgtcag aacctcccgc caggttacct gcaggtaact
      181 tccagggaaa ggccagtttc atcgctgatc atcgacctgg cgccctccgg tgccgtgccc
      241 ccgccgaaac gagcaccgta tgactaccgc cgacctgctg gcctgcctcg agcaggtcac
      301 cgggaagatc aactacgagc agttccggac ctgggtcgtg gcgcagtcga tccgcaacgc
      361 gctcgagccg ttccacggca gcccggcgtt cgacccggac aacccggcca gcggagaggg
      421 attcatcagc gatgatcaga tgcgcgtact caacatcgcg atccgccgtg ccacgcatga
      481 ggcgctgagc caggtggaca tggcccaccg cgccgtcctg caatcgcgcc ttcgggaact
      541 gcgcaccgaa gagcaggaag cgctggattt ttgcggattc cagctcagga ccatcggtgc
      601 ctatatggag ccgcccggct cgcccgagct ggagaaggcg taccagcgtt acatcagcga
      661 gccggacgtc aaccggtaag cgcgacccgc gcggacgaaa gatcaggaaa cgctggccgc
      721 ctgggtcggg atcccgttct gccaagcgac cgtaccggcg gccaccgcgg ctcgggcttg
      781 cgcgtacttc tgtttcgcta gctcgttcgg cgggacctcc atctccctca ccctctgccg
      841 ggtgaccgac agcagatgcg agctgcccac ggctaggcca atgaggacga aaaaggtacc
      901 ggcccccacc agtacagcgc cggtaatcag cgggccactc ctgatctgcg gcctggtctt
      961 gcctttcgcg tcgttattca tgacaccatc ctcacggtcg gttcgttatc gatactgccc
     1021 tcacccagac agaaattgac accacccgcc ctgggtgaat gcgccggttc tatccctgtg
     1081 agccacccgt gacgggtgat acggaggacg ggcgggaggc ctgaggcttg agttagttgc
     1141 ggcagcggac gtgccggtcg tgcttccgcc gggttcaggg aggatgcgtg aaggctgtgg
     1201 cggtggcagt cccggcccgg cggccccgaa gctcgacgct ctggcgcgtg gcaccacacg
     1261 tcgggcccta cttcggccgg ggaagtcact ggactacatc agaagacagc gcccgcgggc
     1321 tccactgctg gcttgaagag acttcccccg tccgccgcgc gatctaccgg gccgaggttc
     1381 agctgaccga tgtcttcgag gcgccgcccg ggatcctcct gcgactgtcc gaagtg
//
LOCUS       DASRPQ010000898         1321 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2926430, whole genome shotgun sequence.
ACCESSION   DASRPQ010000898 DASRPQ010000000
VERSION     DASRPQ010000898.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1321
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2926430"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..181
                     /locus_tag="VFD73_10160"
     CDS             <1..181
                     /locus_tag="VFD73_10160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74369.1"
                     /translation="FPPGFSESEGDGVKALWKSRGDPMKIKALRVLINPASEAGDAVL
                     SSIPTAWDIRGTQAR"
     gene            complement(357..845)
                     /locus_tag="VFD73_10165"
     CDS             complement(357..845)
                     /locus_tag="VFD73_10165"
                     /inference="COORDINATES: protein motif:HMM:NF024304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HZI74370.1"
                     /translation="MSDDNADPSSPSGSAPPDSEASAWRVLERLSEAECLELLVNGGG
                     VGRLVYTNRYGPTALPVAYTIDEGSVVLGTWDPILFDEDLRTGIAQAEYQVAVEVDQI
                     DAEAREGWFVLVVGAAHHLDTEAERASFTGAGLGPWIEGVPAHFIRVNPTTIWGNRVR
                     RA"
BASE COUNT          266 a          410 c          425 g          220 t
ORIGIN      
        1 gttccccccg ggatttagtg aatctgaagg cgatggcgtg aaagcgctat ggaaaagccg
       61 tggagacccg atgaagatca aggcgctccg agtcttgatc aacccggcat cagaggccgg
      121 ggatgccgtt ctgagctcaa tccccacagc atgggacatt cgtgggacgc aggcccgcta
      181 gttcacgtgg tctgatttgg ccatacgacg atgagtaaca acgggagacg acgcgagccg
      241 atgagtgcca tcctggcagg ccagccgctg agtgcccagg tcgcaggtgc gcgcagcaca
      301 gtctacggat cagagggctg gcccttgttc ggttcgcgag cacattgccg ctggcatcat
      361 gcccggcgga cgcggttgcc ccagatggtg gtgggattca cccggatgaa gtgcgcgggc
      421 accccctcga tccacggccc gagcccggca ccggtgaacg acgcgcgctc ggcctcggta
      481 tccagatgat gcgccgcccc cactaccagc acgaaccacc cctcacgcgc ttcggcatcg
      541 atctggtcca cctccaccgc gacctggtac tcggcctgcg cgataccagt gcgcaggtcc
      601 tcatcaaaca ggatgggatc ccacgtgccc aagacaaccg atccctcgtc gatcgtgtac
      661 gcaaccggca gcgcggtggg cccataccgg ttggtgtaga ccagacggcc caccccgcca
      721 ccattgacga gcagctccaa gcattcagcc tcactcagac gctccagcac gcgccaggcg
      781 ctcgcttccg agtcgggcgg agcagaaccg ctgggagaac tggggtcggc gttatcgtct
      841 gacatggctc caaaccctag tcgccctgcc cggcgatggc acggtacggc tggcgagagg
      901 ccgagtaacc aagtgagtaa caatcgccac tgacagtagt ggacgctggc agtcactcac
      961 ggacagtctg tccccaggtc aggcgtgctg cggcgctgac agcccacgtc agtacttggc
     1021 ttcgggacga agaggatcgt gtcgcgcgcc cgatggacgg gttggtgggc tggcagggca
     1081 catcgcgggc acatgagtac gcgactctgc gtgaaatgac gagaaccagc gagacgaagc
     1141 gtcgcaagtc agggcgtgtg gcaaccagcc atcgcaggtc agcggaggcg gctcgttact
     1201 tccgctggaa atagcgacac tggcatggtc agaaatagcg atactggcat ggtcggctga
     1261 gctgggcccg cgctcctaca gagattgaat gggtggggct tgtctgcttg atcacgtacg
     1321 g
//
LOCUS       DASRPQ010000899         1246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1045400, whole genome shotgun sequence.
ACCESSION   DASRPQ010000899 DASRPQ010000000
VERSION     DASRPQ010000899.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1045400"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..772
                     /locus_tag="VFD73_10170"
     CDS             <1..772
                     /locus_tag="VFD73_10170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74371.1"
                     /translation="LIQVNATEEFLRRQGYRYYFFPTRFEATASSKTADVQLPSPRRV
                     QPEFYLARRRMTALEAIIRLSNRGFPFLPEAADLTDWKFHQLELLPDSAGPKFVFAHL
                     ILPHEPYIYRSDCSHREPYWPGRDDGVDSNLIKQAYIEQITCVNAKVRHLVEQLQDRS
                     SVPPVILLLADHGHGRLGRVVPELGQAPAEKVRERFDIFSAYFVPGHGPGTFYDSISP
                     VNGIRASLASVFGLNLPKLQDLSHWSSSIYPYDFKLVP"
     gene            complement(785..>1246)
                     /locus_tag="VFD73_10175"
     CDS             complement(785..>1246)
                     /locus_tag="VFD73_10175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74372.1"
                     /translation="SSTRDSTQPLDSLAQSPVTADTGRGRGGAAPSTSDSLRRDASRA
                     RSDTSSAPRAARDSILQRACGNPGTLPVARDLLVVVFRPDAGARERAAAVRSVKGKLL
                     GPVSAEPGAYYVRVPAGGQEFRLRSAADELAQLAAVQQVGSRACPIPQSRG"
BASE COUNT          225 a          395 c          378 g          248 t
ORIGIN      
        1 gctcattcaa gtcaacgcca ccgaggagtt cctgaggcgt caggggtacc gctactactt
       61 cttcccaacg aggttcgagg ccacggcttc gagcaagacg gccgatgtgc agcttccgtc
      121 tcccagacgg gttcagccgg agttctatct ggcaaggcgg cgcatgaccg cgctcgaggc
      181 catcatccgg ctgagcaatc gcggctttcc tttcctgcct gaggccgccg atctgaccga
      241 ttggaagttc catcaactcg agctcctgcc ggacagcgca ggtcccaagt tcgttttcgc
      301 tcacctcatc ctccctcatg agccgtacat ctaccgcagt gattgcagcc accgggaacc
      361 atactggcca ggccgagacg atggggtgga ctccaacctc atcaagcagg cctacattga
      421 gcagataacc tgtgtaaatg cgaaggttcg gcatctggtc gagcagctgc aggaccggtc
      481 atcagtgccg ccagtgattc tgctcctggc tgatcacggc cacggccggc tcggtcgggt
      541 ggtgccggag ctgggtcaag ctccagctga gaaggtgaga gagcgctttg atatcttcag
      601 cgcctacttt gttcccggtc atgggcccgg cacgttttac gattcgatca gtccagtcaa
      661 cggcattcgc gcgagtctcg ccagcgtgtt cggactgaat cttccgaagc tccaggacct
      721 atcccattgg tcctcatcaa tatatcccta cgacttcaag ctggttccgt gacgaatggc
      781 ggtgctaccc tctcgattga ggaattgggc aggctcggga accgacctgt tggaccgctg
      841 cgagttgggc cagctcatcc gcggccgacc gaagcctgaa ttcctgtccg ccggccggca
      901 ctcgaacgta gtaggcccca ggttcggcgc tcaccggccc aagcagtttg cccttgacgc
      961 tcctgacggc cgcggcgcgt tcccgggctc ccgcgtccgg tcggaacaca accacgagga
     1021 ggtcgcgggc gacgggcaac gtgcctggat ttccgcaagc acgctgaagg atgctgtctc
     1081 tagccgcccg cggagcggag gacgtatcgg accgggcgcg cgaggcgtct ctccggagac
     1141 tatcggaggt cgatggcgcg gcacctccac ggcctcgacc ggtgtctgcc gttaccggag
     1201 actgagccag actatccaag ggctgggtgg aatctcgggt gctgct
//
LOCUS       DASRPQ010000900         1124 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_106836, whole genome shotgun sequence.
ACCESSION   DASRPQ010000900 DASRPQ010000000
VERSION     DASRPQ010000900.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106836"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..527
                     /locus_tag="VFD73_10180"
     CDS             <1..527
                     /locus_tag="VFD73_10180"
                     /inference="COORDINATES: protein motif:HMM:NF016070.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF397 domain-containing protein"
                     /protein_id="HZI74373.1"
                     /translation="DFSTRQGIPGRPVRQYRQLSASTAYRRPGRSLPHLRTGQPRGVE
                     PPESITQSDTAGLRDTPSATLRIGPDTRPSNVYDANASPNARAYAKDVRKVQLMTAIY
                     NGMPGDSIEDLTWRKSQRSGPNGNCVEVAKLPGGGVAMRNSRHTDGPALVFTKAEIEA
                     FLGGAQDGEFDYLV"
     gene            complement(684..899)
                     /locus_tag="VFD73_10185"
     CDS             complement(684..899)
                     /locus_tag="VFD73_10185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74374.1"
                     /translation="MNTDRGGRKMVRIWLGDHLIAEYLAEPDRASRYQRVMTPKFTGL
                     RITVDNAATGKASELPSSEQLWPLTVQ"
     gene            complement(896..1087)
                     /locus_tag="VFD73_10190"
     CDS             complement(896..1087)
                     /locus_tag="VFD73_10190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74375.1"
                     /translation="MIDDDSAVAEQTAYAGGRAPDELTEREIQELVARCPEQQRWAFE
                     GWLRGVRQLDGDPIVSLAP"
BASE COUNT          198 a          379 c          361 g          186 t
ORIGIN      
        1 ctgatttctc aactaggcaa gggattccgg gccgcccggt gcggcagtac cgacagctgt
       61 ccgcgagtac ggcgtaccgg cgacccggtc ggagtctgcc ccacctgcgc accggtcaac
      121 cacgcggcgt ggaaccgccg gaatccatca cccaaagcga caccgcgggg ctgcgcgaca
      181 caccttcggc cacgctccgt attggaccgg acacgaggcc ctccaacgtg tacgatgcaa
      241 atgcaagccc aaatgcacgt gcatatgcca aggacgtacg gaaggtgcag ctgatgactg
      301 ctatctacaa cggcatgccc ggcgactcca tcgaggatct gacctggcgg aagagccagc
      361 ggagtggccc caacggcaac tgcgttgagg tggcgaagct gccgggcggc ggcgtggcga
      421 tgcggaactc gcgtcacacc gacggaccgg cgctggtatt caccaaagcg gagatcgagg
      481 cctttctggg cggcgcccag gacggggagt tcgactacct cgtctgacct cgcagctctc
      541 ggaaagccag ggccccttcg ccaggcgagt gacgaagggg cccttttcca tgccctgatc
      601 cagggacgcc cggacaacgt cgaaggccgg ccctcggagg gagggccggc cttcggtgtt
      661 accggagaag cttgtctgta ctactactgc acggtgagcg gccagagctg ttcgctgctc
      721 ggcagctcgg aggccttgcc ggtggccgcg ttgtccacgg tgatccggag accggtgaac
      781 ttcggcgtca tcacccgctg gtaccgagag gcacggtcag gctcggccag gtactccgcg
      841 atcagatgat cccctagcca gatccgtacc attttccgtc ctcctcggtc ggtgttcatg
      901 gggccaggct cacgatgggg tcgccgtcga gctgacggac cccgcgcaac cagccttcga
      961 aggcccagcg ctgctgctcg gggcagcgcg ccaccagctc ctggatctcc cgctcggtca
     1021 gctcgtcagg cgcgcgtccg ccggcatagg cggtctgctc ggctaccgca ctgtcgtcgt
     1081 caatcatcga ctcgggttcc ccaaccagtc atgccggtgc actc
//
LOCUS       DASRPQ010000901         1165 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3870721, whole genome shotgun sequence.
ACCESSION   DASRPQ010000901 DASRPQ010000000
VERSION     DASRPQ010000901.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3870721"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1034)
                     /locus_tag="VFD73_10195"
     CDS             complement(<1..1034)
                     /locus_tag="VFD73_10195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74376.1"
                     /translation="MVSFLKGRRRDDDSVVAIDSSGRDITAALEALVNRAEAAANDLR
                     SLAPILERTSEIDGLRERCSDIESRVAGLDRLGSQLAMAEDQVERVIKTQNATEARIG
                     HSNDALERIQGQMSVLSDKVETALLLREQVESFLSLQGPLAALKGDADTLRVQLGELA
                     ENVARMRTQHDDALTAHRHTTSRLENFDQDFQTATGKLEDMVRRVQSIERQMEPINQA
                     STAIPDVQHQLAVLKALADQVAQKTTMLEQEREAIDRAATQIAQLTRMDRELDAWLRR
                     QEEQIRRFGPIEAKITEVKTIQDKVLARTEELQSTSQKIEDAQQAARQALTDLKEQMR
                     KSSEGFELEHR"
BASE COUNT          187 a          366 c          372 g          240 t
ORIGIN      
        1 cggtgctcca gctcgaagcc ttcgctgctc ttgcgcatct gctccttgag atcggtgagc
       61 gcctgccggg ccgcctgctg ggcatcctcg atcttctggg aggtagactg gagctcctcg
      121 gtgcgggcaa gaactttgtc ctggatggtc ttcacttcag tgatcttggc ttcgatggga
      181 ccgaaccggc ggatctgctc ctcctgccgg cggagccaag cgtcgagttc ccggtccatt
      241 cgggtgagct gggcgatctg agtcgctgcc cggtcgatcg cttcccgctc ctgctccagc
      301 atcgtggtct tctgggcaac ctgatctgcc agcgccttga ggacggcaag ctgatgctgc
      361 acatccggaa tggcggtgga cgcctgattg atcggctcca tctggcgttc gatcgactga
      421 acccggcgaa ccatgtcttc cagcttcccg gtggcggtct ggaagtcctg atcgaagttt
      481 tccagccggg aagtcgtgtg ccggtgggcc gtaagagcat catcgtgctg agtccgcatc
      541 cgagccacgt tctcggccag ctccccgagt tggacccgga gcgtatcggc atcgcctttg
      601 agagccgcaa gcgggccctg cagactgagg aaagactcga cctgctcccg gaggagcagt
      661 gcagtttcca ctttgtcact caggacgctc atctgcccct ggatgcgctc gagagcatca
      721 ttggagtggc cgatccgcgc ctcggtcgcg ttctgggtct tgatcactcg ctcgacctga
      781 tcctctgcca tggcgagctg cgatcccagc cgatcgaggc cggccacccg gctctcgatg
      841 tcggaacaac gctcccgcag accatcgatc tcggaggtac gctccaggat tggggcaagc
      901 gagcggaggt cgttcgccgc ggcttcagcg cggttcacca gcgcctccag ggcggcggtg
      961 atgtctctcc cgctcgagtc gatggcgacc acggagtcgt catcgcgacg gcgacctttc
     1021 aggaaactga ccattggctt actccgaggg gatgcgcacg cgatcaatcg gtatagcgcc
     1081 agggggctga cgatctcgga tcacgagcgg ggtgaagatt ggggtacgaa aggcgaccgc
     1141 ggcctaactg caacgcgtgt gcccc
//
LOCUS       DASRPQ010000902         1351 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3870752, whole genome shotgun sequence.
ACCESSION   DASRPQ010000902 DASRPQ010000000
VERSION     DASRPQ010000902.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1351
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3870752"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..380)
                     /locus_tag="VFD73_10200"
     CDS             complement(<1..380)
                     /locus_tag="VFD73_10200"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HZI74377.1"
                     /translation="MSPSLLAALGRIVGHKWVRHRRAELATYAMDGLPTHESVPGVVV
                     MPETPAQVREIVHLLHLVQVPFVARGAGTGLSGGALAQPEAVLISLTRLNRILEIDPA
                     RRRAVLQPGVVNARLSEAVLPFGL"
     gene            complement(377..1045)
                     /locus_tag="VFD73_10205"
     CDS             complement(377..1045)
                     /locus_tag="VFD73_10205"
                     /inference="COORDINATES: protein motif:HMM:NF014269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HZI74378.1"
                     /translation="MPFRLPIFPLSVVLFPGNPLPLHIFEPRYRRMLSDVLAADRRFG
                     IVPVLSETDVPVADAIGCIAEVRLNQELSDGRSNIVVLGGTRFRVARVLNDPAPYLIA
                     QIETFEDEPGSEPPVEAVDALRQLFGRYLAGVRELNDTPPEDPVLPDDAATLSFHVAG
                     AIECDVALKQRLLAQRSTARRVNDLCLLLPILTSAVDRGLEVHRGAHSNGGGGKMPDM
                     RSVP"
     gene            complement(1140..>1351)
                     /locus_tag="VFD73_10210"
     CDS             complement(1140..>1351)
                     /locus_tag="VFD73_10210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /protein_id="HZI74379.1"
                     /translation="FQRHLTPRERKILSLYYGLEEGSEALTLEKIGALLGVTRERIRQ
                     IRERAFEKLRDSPDVRALRGFWGAA"
BASE COUNT          276 a          421 c          437 g          217 t
ORIGIN      
        1 tagagaccga acggcaggac cgcctccgat agccgggcat tcacgactcc gggttgcagc
       61 accgcgcggc ggcgagctgg gtctatttcc aatatgcggt tcagcctggt gagagagatg
      121 agaacggcct ccggttgagc caacgccccc ccggagagtc cggtgccggc gcctcgtgcc
      181 acgaacggca cctgcaccag gtgaagaaga tgaacgatct cccggacctg agccggtgtt
      241 tccggcatca cgacgacacc cggcaccgac tcgtgggtag gaagtccatc catggcatag
      301 gtggccagct ccgcacgccg atggcgcacc cacttgtgac ctacaatccg gcccagtgct
      361 gcaaggagtg atggactcat gggacggagc gcatgtccgg catctttcca ccccctccgt
      421 tactgtgtgc cccgcggtgc acctcgaggc cacgatcgac ggcactcgtc agaatcggta
      481 acaagagaca caggtcgttt acccggcggg cggtggatcg ttgcgcaagg aggcgctgct
      541 tgagcgccac gtcgcactcg atagcgccag cgacatggaa ggaaagggtc gcggcatcgt
      601 ccggcaggac aggatcctct ggaggggtgt cgttcagctc ccgaactccg gcaaggtagc
      661 ggccgaacaa ttgccggagg gcatccacgg cttcgaccgg cggttcactt ccgggttcgt
      721 cctcgaaggt ctcgatctgc gctatcagat agggagctgg atcattcaac acccgagcaa
      781 ccctgaagcg cgtgcctccc agaaccacaa tgttcgaacg cccgtccgag agctcctgat
      841 tcagacgtac ctcggcgatg cagccgatcg cgtcagccac tggaacatcg gtctccgaga
      901 gtaccggtac gatgccgaac cgccggtcgg ccgcgaggac atcggacagc atgcggcggt
      961 accgcggctc aaagatgtgc agcggaagag ggtttcccgg gaagagcaca accgagagtg
     1021 gaaagatggg cagccggaag ggcatgcgga aaggtaagcg gtgagagatg agaagtgagc
     1081 ggggggcccc ggcgaccgag accccccgcg taccgctcac cgttccggat cgaccggtgt
     1141 caggctgctc cccagaagcc ccgaagcgcc cgcacatcgg gagagtctcg gagcttctcg
     1201 aatgcgcgct cgcgaatctg ccggatgcgc tcccgagtga ctccgagcag ggcgccgatt
     1261 ttctccaggg tgagggcttc ggatccttct tccaggccgt aatacagcga caggatcttc
     1321 cgttcccgag gggtcagatg ccgctgaaag a
//
LOCUS       DASRPQ010000903         1703 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_735776, whole genome shotgun sequence.
ACCESSION   DASRPQ010000903 DASRPQ010000000
VERSION     DASRPQ010000903.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1703
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_735776"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..289
                     /locus_tag="VFD73_10215"
     CDS             <1..289
                     /locus_tag="VFD73_10215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74380.1"
                     /translation="NLIIRQTSDSPGEQGSVRGEWQRRDDGYTITLAIAPPEGSTLNL
                     GDEVRFDLLVNRALPDRTRRAGQLVWSGGGGWVWLRGDRQDPANFGTVELR"
     gene            325..1491
                     /locus_tag="VFD73_10220"
     CDS             325..1491
                     /locus_tag="VFD73_10220"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HZI74381.1"
                     /translation="MSEHIAGFTSTGSKRPETLFGVHDPSLPLRMTRSAGCCVWDEHG
                     REYTDYIMGLGSVALGYAHPTVVSAASSAVAAGAVGPLGPVLEEEVASTFCRLVPWLE
                     RVRFLKTGAEAMAAAVRLARVYTGREGILGCGYHGWLDWSQGAAGVPLSTRALYGELP
                     FNDPEGAREQIRASGNQLAAVVFEPVVVSEPSVEWLRVLREETTRVGALLVVDEIKTA
                     CRLAIGGACERYSIRPDLVVMGKAIANGFPLALVGGRSSVMAGVNRTWISSTLATEFV
                     SLAAAQATLETMESVPVMDHLQRTGIRLLEGLRSLSREHADSITGVGGIPQMCFLHYS
                     DEAVSQAVTAACAHNGLLFKRSAYNFVSLAHDEVVVDRSLELLAEALSAVTKPA"
BASE COUNT          302 a          490 c          604 g          307 t
ORIGIN      
        1 aaatctgatt atccggcaaa cctccgacag cccgggcgag caggggagtg tgcggggaga
       61 atggcaaagg agggatgacg gctacaccat caccctcgcg atcgcaccgc ctgagggttc
      121 tactctcaac ctgggtgatg aggtaaggtt tgatctcctc gtcaatcgag cgctgcccga
      181 ccgcacccgc cgcgccgggc agctggtatg gagcggaggc ggcggctggg tctggctccg
      241 cggcgaccgt caggatccgg cgaacttcgg gacggtcgag ctccgctgac tgacggcgaa
      301 cgtgcggaca caccaggagg caggttgagc gagcacatcg caggcttcac ctccaccggc
      361 agtaagcgcc ccgaaactct cttcggagtg cacgatccca gtctgccatt gcggatgaca
      421 cgctccgccg gttgttgcgt gtgggatgag cacggacggg agtacaccga ttacatcatg
      481 gggctgggct cagtcgccct gggttacgcc cacccaacgg tggtcagtgc tgcatcgtcc
      541 gcggtggcgg cgggagcagt ggggcctctt gggccggtgc tggaggagga ggttgcctcg
      601 acgttttgcc gactggtgcc ctggctcgag cgagtgcgct ttctcaagac cggggccgaa
      661 gcgatggccg cggcggtgcg tcttgcgcgg gtatacaccg ggcgggaagg cattctgggg
      721 tgcggctatc atggttggct cgactggtcg caaggtgcgg ccggggtgcc gctctccacc
      781 agagcgctct acggtgagct cccgttcaat gatccggaag gagctcggga acagatccgt
      841 gcttccggca atcaattggc ggcggtggtc ttcgagccgg tggtggtgag cgagccatca
      901 gtggaatggc tgcgggtcct tcgggaagag accacccggg tcggtgcact gctggtggtg
      961 gatgagatca aaacggcgtg tcgcctcgcg atcggcggcg catgcgagcg ctactcgatt
     1021 cgccccgatc tggtggtcat gggaaaggcg atcgccaacg ggttcccgct ggccctggtg
     1081 ggagggcgga gctcggtgat ggccggcgtg aaccgcacct ggatttcctc caccctcgcc
     1141 acggagttcg tctccctggc ggcggcccag gcaacgctcg agaccatgga gtcggtgccg
     1201 gtgatggacc atctccagcg aaccgggatt cggctgcttg agggtcttcg gtctttgagc
     1261 agggagcatg cggacagcat cactggcgta ggcgggattc cgcagatgtg cttcctccat
     1321 tacagcgacg aggcggtttc ccaggccgtg acggcggcct gcgcccataa cggcctcctg
     1381 ttcaagcgtt cggcctacaa cttcgtatcg ctggcacacg acgaggtggt ggtcgaccga
     1441 tcgctcgagc tgcttgccga ggccctctct gcagtgacca aacctgccta gattgggagc
     1501 ggaggttctg cgctgacgca cacaggagag tcacatgtca ccacggaagc caaccgtcga
     1561 cgatctcgac gatatcgatg acgaggacgg cgtgctggag gaggagcaag ccgaagagac
     1621 cgacctcgat cttcctacgg agcgggagga tgatgttgga ctcggagggg ttcagggcaa
     1681 cctggatcag gagaaggagg aga
//
LOCUS       DASRPQ010000904         1244 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1993616, whole genome shotgun sequence.
ACCESSION   DASRPQ010000904 DASRPQ010000000
VERSION     DASRPQ010000904.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1993616"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1244
                     /locus_tag="VFD73_10225"
     CDS             <1..>1244
                     /locus_tag="VFD73_10225"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HZI74382.1"
                     /translation="EPSLSGIHKIRHIVIIMQENRSFDSYFGTYPGADGIPGIAGNPG
                     QVPCIPHHHRLFGARAHHQHKPHHSRRRGHACARPFHDRRDLNHGGPHSAGAARADIS
                     NGEMNGFLASAHKARRNCEQNFNPACGAAIGSKPDVLGYHTGRDIPNYWAYARHFVLQ
                     DHMFQPDLSWSLPSHLYMVSEWSAHCVNSDPGSCRQAIEHPANPLGFPRTHPHHEPPH
                     YAWTDLTYLLHKYHVSWRYYVLKGTEPDCELNNAVACAPVKQGARTPGIWNPLPYFED
                     VHQDSQLGNIQSLSQFYAAARQGNLPAVSWIVPNGHVSEHPPGLISAGQSYVTGLINT
                     VMRSPDWKSTAIFLAWDDWGGFYDHVVPPRVDFQGYGLRVPGLVISPYAKRGFVDHQT
                     LSFDAYVKFIEDDFLGRRRLDP"
BASE COUNT          238 a          442 c          362 g          202 t
ORIGIN      
        1 ctgaacccag tctgagcggc atccacaaga tccgccacat cgtgatcatc atgcaggaga
       61 accgctcctt cgactcctac ttcggcacgt acccgggcgc cgacggcatt cccgggattg
      121 ccggtaaccc cggccaagtg ccgtgtatac cgcaccatca ccggctattc ggggccaggg
      181 cacaccatca acacaagccg catcacagcc ggcggcgcgg gcacgcatgc gcgcggccgt
      241 tccacgaccg tcgcgacctc aatcacgggg ggccgcacag cgccggggct gcccgcgcgg
      301 acatcagcaa cggagagatg aacggcttcc tggccagcgc gcacaaggcc cggcgcaact
      361 gcgagcagaa cttcaacccc gcgtgcggtg cggcaattgg ttctaagcct gacgtcttgg
      421 ggtaccacac cggccgcgac atccccaact actgggccta cgcgcgccac ttcgtgctac
      481 aggatcacat gtttcagccg gatctctcct ggagcctgcc ctcgcacctg tacatggtgt
      541 ccgagtggtc ggcgcactgc gtgaacagcg acccggggag ctgccgccag gcaattgagc
      601 atcccgccaa cccgctgggc ttccccagga cccaccccca ccacgagccc ccgcattacg
      661 cctggacgga tttgacctac ctgttgcaca aataccacgt ctcctggcgc tattacgtgc
      721 tcaagggaac agagcctgac tgcgagctca acaacgccgt cgcctgcgca ccggtcaaac
      781 agggggcaag gacgcccggg atctggaacc cgctgcccta cttcgaggat gtgcaccagg
      841 acagccagct cggaaacatc cagtcgctct cgcagttcta tgcggccgcc cgccaaggca
      901 acctccccgc ggtctcctgg atcgtgccca acgggcacgt ctctgagcac ccgcccgggc
      961 tgatcagcgc tggccaaagc tacgtgacgg gcctgatcaa cacggtcatg cgaagcccgg
     1021 attggaagtc gacggcgatc tttctcgcct gggacgactg gggcgggttc tacgaccacg
     1081 tcgtgccgcc acgcgtcgat ttccagggat acgggctgcg cgtacctggg ctcgtgatca
     1141 gcccgtatgc caagcgcggc ttcgtcgacc atcagacact gagcttcgat gcctacgtga
     1201 agttcatcga ggacgacttc cttgggcggc ggcggcttga ccca
//
LOCUS       DASRPQ010000905         1009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3552680, whole genome shotgun sequence.
ACCESSION   DASRPQ010000905 DASRPQ010000000
VERSION     DASRPQ010000905.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3552680"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1009
                     /locus_tag="VFD73_10230"
     CDS             <1..>1009
                     /locus_tag="VFD73_10230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74383.1"
                     /translation="PVNLRIAWNPDYRPPVVTYNDYGVANSFDHFTNPAEPAIILALD
                     TRRGWHAAVTRSGWTINPSLTTFLFNQVQQILPEPVRSETPDGPLGSFRKLLRLDQPS
                     HDAAWQTILDWTLAALRPPKDASFHDYPILNLVGPHNSGKSVTAKLLASLIDPSGAPL
                     HSLPTTERRLHGLAATHHVLAFDDPGKINPEKSRYLSRLSSGVASLHPALQGMLVRPV
                     ILTTQNEKETRHLSHRVVDVHLPEVETRLPQEQIWKEFEQLRPALLGALLTLLVRDFD
                     QPRYLVPNRKTEKQKIEESVPAFVAEQGGEWSGSVTGLKAALPFEVSIQALGRYLADT
                     HA"
BASE COUNT          195 a          395 c          239 g          180 t
ORIGIN      
        1 cccgtcaacc tccgcatcgc ctggaaccct gattatcggc cgcccgtcgt cacctacaac
       61 gactacggcg ttgccaatag ctttgaccat ttcaccaacc ctgccgagcc cgccatcatc
      121 ctggccctcg acacccgccg cggctggcac gccgccgtca cccgctccgg ctggaccatc
      181 aaccccagcc tcaccacctt cctcttcaat caggtccagc aaatcctccc cgaacccgtc
      241 cgctccgaaa ccccggacgg cccgttgggt tcgtttcgaa aactgctccg tctcgaccag
      301 ccgagccacg acgccgcctg gcagaccatc ctcgactgga ccctggccgc cttgcgtccc
      361 cccaaggacg cctccttcca cgactacccc atcctcaatc tcgtcggacc tcataattcg
      421 ggcaaatctg tcaccgccaa actcctcgcc agcctgatcg accccagcgg cgcgcccctc
      481 cactcgctcc ccaccaccga gcgccgcctc cacggcctcg ccgccaccca tcacgtcctc
      541 gcttttgacg atcccggcaa aataaatccg gaaaaatcgc gatatctgtc ccgcctttcc
      601 tcgggcgtgg cgtcgctcca ccctgcactc cagggcatgc tggtccgtcc cgtgatcctg
      661 accacccaaa atgagaaaga aacgcggcat ctgtcacacc gtgtggtcga tgtccatctc
      721 ccggaggtgg agacgcgctt gccccaggaa cagatttgga aagaatttga gcaattgcgc
      781 cctgcgctgc tgggcgccct gctcacgctt ctggtccgcg atttcgatca accgcggtac
      841 ctcgtgccca atcgcaaaac agaaaagcaa aaaatcgagg aatctgtccc tgccttcgtg
      901 gcggaacaag gcggcgaatg gagcgggagc gtcaccgggc taaaggccgc gctgccgttc
      961 gaagtctcga tccaggcgct gggccgttac ctggccgata cccacgctc
//
LOCUS       DASRPQ010000906         1162 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1674285, whole genome shotgun sequence.
ACCESSION   DASRPQ010000906 DASRPQ010000000
VERSION     DASRPQ010000906.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1674285"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(155..508)
                     /locus_tag="VFD73_10235"
     CDS             complement(155..508)
                     /locus_tag="VFD73_10235"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI74384.1"
                     /translation="MDINKDLIAASSTPIVLAILAEEASYGYAILKRVRELSGGRLEW
                     TDGMLYPVLHRLERLGYIDARWRIAESGRRRKYYRITRRGREQLAEERRQWQAVDATL
                     RGVWRALAQPVAQGA"
     gene            complement(654..974)
                     /locus_tag="VFD73_10240"
     CDS             complement(654..974)
                     /locus_tag="VFD73_10240"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZI74385.1"
                     /translation="MKLIDFSTVAPRQIAPGYLGRYVHSDEITQGRVDIEPGAAIPDH
                     SHRHEQWTLLLSGSFQLTVSGVTHVLQPGQMLYIAPYERHSARALTACVVLDVFHPPR
                     DDYR"
     gene            complement(971..>1162)
                     /locus_tag="VFD73_10245"
     CDS             complement(971..>1162)
                     /locus_tag="VFD73_10245"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HZI74386.1"
                     /translation="RQIGQWGTEYGPAHDLGSAPMKSESVKPPVEKFTISIEPKDARH
                     GTLVMTWGTFRWNAPIVVE"
BASE COUNT          204 a          383 c          362 g          213 t
ORIGIN      
        1 gcccggcgtc gaccaggacc gccacctgtt cgcgcagatg gtcctccagc tcggagacat
       61 cggttggatg gaacgcctgg cggcggcgca gatagccgcg ccactgctca atctgctgct
      121 ccagcgaagc cgcgtcaccc gaagccgcca tcgctcacgc cccttgagcg accggctgag
      181 ccagggcccg ccagacaccc cgcaatgtcg cgtccaccgc ttgccactgc ctccgttcct
      241 cggccagctg ctcccgaccc cgccgggtga tccgatagta tttgcggcgg cggccgctct
      301 cggcaattcg ccaccgcgca tcgatgtaac cgagccgctc aagccggtgc agaacgggat
      361 acagcatccc gtcggtccat tccaggcgtc cccccgacaa ctcccggact cgtttgagga
      421 tggcgtaacc gtagctggcc tcttccgcca ggatcgccag gacgattggg gtcgaggacg
      481 cggcaatgag gtctttattg atgtccatca tgtcgtccgg aagagtacct ggcagcacta
      541 tacattgcag cactaggtat gtcaaacagc cggcggtagc ctcgctgcgc tagggcggtc
      601 gtgtcggtac atgacgagct ccgaagcagc cgaagcaggc tctggcctac ctctcagcga
      661 taatcgtcgc gggggggatg gaacacgtcg agcaccacgc acgctgtgag ggcacgcgcc
      721 gagtggcgct catatggcgc gatgtaaagc atctggcccg gttgcaagac gtgagtgacg
      781 ccggagacgg tcaactggaa ggatccgctc agcagcaggg tccactgctc gtgccggtgg
      841 gagtgatcgg gaatggccgc cccgggttcg atgtccaccc ggccttgggt gatctcgtcc
      901 gagtggacat agcggccgag gtagcccggg gcgatctgac gcggcgcgac ggtcgagaag
      961 tcgatgagtt tcattccacc acaatcggcg cgttccatcg aaacgtcccc caggtcatca
     1021 ccagggtgcc gtgccgcgcg tcctttggct cgattgaaat ggtgaatttt tccaccggtg
     1081 gcttcacact ttctgacttc atcggggcgc tgcccagatc gtgggctggc ccgtactccg
     1141 ttccccactg cccgatctgc cg
//
LOCUS       DASRPQ010000907         1857 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2300885, whole genome shotgun sequence.
ACCESSION   DASRPQ010000907 DASRPQ010000000
VERSION     DASRPQ010000907.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1857
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2300885"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(80..382)
                     /locus_tag="VFD73_10250"
     CDS             complement(80..382)
                     /locus_tag="VFD73_10250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74387.1"
                     /translation="MQKFSVYLENGFDHDHVTLAVDDQLLADQSDLSTRYQIGLAHKV
                     DITVPDAGPNVLRVGLPDRGRTAEVALDAASGRHIRVNLVGDEPVIDVDPDPPRFA"
     gene            complement(466..675)
                     /locus_tag="VFD73_10255"
     CDS             complement(466..675)
                     /locus_tag="VFD73_10255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74388.1"
                     /translation="MATHDEATSHKSEVARTALAGLSTKIWRHVVEPNAQAAADFLNL
                     APAQVAGEGMVSNRADGTVDVYYFL"
     gene            complement(917..>1857)
                     /locus_tag="VFD73_10260"
     CDS             complement(917..>1857)
                     /locus_tag="VFD73_10260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74389.1"
                     /translation="QVRWHYQWMLVTDYLPKIVNSGTYAGVFADPRNPIPGLPELEHG
                     LRLMPVEFSVAAFRFGHSMIRPLYRLNTTIERRPIFLPGRYRQAQADDAADLRGFRPV
                     PADWAIDWQFFIDLEHTQEPRTMPPPYDQIAREPQHAYKIDTSLVSPLHDLPRQIASG
                     PSILALRNLERGQTFSLPTGQQAATALSERVIPDERLVIGKATAGDTKKPIARVAGSF
                     AGQAPLWAYILSEAQVTSWENAGPGLSPDKIPVKLGPVGGRIVAGVFAALLQRDRTSY
                     LSNGTAFAPIPDFCRGEKFGLAELINVALRPRPRGR"
BASE COUNT          310 a          581 c          627 g          339 t
ORIGIN      
        1 tggcattgga accccttcgg gtagtcgggt cttacccggg agaggctgat ttcgtcggcc
       61 cagatacatg ccctgctggt caagcgaatc tcggagggtc cgggtcgacg tcgatgactg
      121 gctcatcccc gacgagattc accctgatgt ggcggccgga ggcagcgtcc agggccacct
      181 ccgcagtccg gccccggtcc ggcagcccga cgcggagcac gtttggcccg gcgtcgggga
      241 cagtgatatc gaccttgtgc gcgaggccga tctgataccg cgtgctcagg tcagactgat
      301 ccgcgagcag ttggtcatca acggccagtg tcacgtgatc atggtcgaat ccgttttcca
      361 ggtacaccga aaacttctgc atacctgcag ggtcccacct tccgcatgcg ggcgtcagcc
      421 atgcccgccg tcgtggcgga cgggcatggc tgacgatagt ggggtctaga ggaagtagta
      481 gacatccacc gttccgtcgg ccctattcga gaccatgccc tcgcccgcga cctgggccgg
      541 cgccaggttc aggaaatccg ccgcagcttg cgcgtttggc tcgacgacat gccgccagat
      601 cttggtcgag agacctgcca gcgcggttct ggcaacctcg ctcttgtgag aagtagcttc
      661 gtcatgcgta gccattctga ccaccccgtt cgatgtattg ccgttctgtc atggcgcccc
      721 tccggcatga ctatctgctg gacatcacct tgcggcagcg ccccggatac ctgttgcacc
      781 cggacatcag ttacagatgc agcccggccg gcgcgtgata cggcaaaaag catgtatcag
      841 cagcactcag gtgttccccg gctctgatat cggcagggac tatccacgga tttgaacggg
      901 ccagccctga ccctggttac ctgcctcgcg gccggggccg gagcgcgacg ttgatcagct
      961 cggcgagccc gaacttctcg ccgcggcaga agtccgggat gggggcgaag gcggtgccgt
     1021 tgctgaggta ggacgtgcga tcgcgctgga gaagggcagc gaacaccccg gcaacgatcc
     1081 ggcccccgac gggcccgagc tttaccggga tcttgtcggg ggacaggccg gggccggcgt
     1141 tctcccagga cgtcacctgc gcctcagaca ggatgtaggc ccacaacgga gcctggccgg
     1201 caaagctgcc ggcgacccgc gcgatgggct tcttcgtatc accggcggtc gcctttccga
     1261 tcaccagcct ttcgtcgggg atcaccctct cactgagggc cgttgccgcc tgctgcccgg
     1321 taggaagcga gaaggtctgc ccgcgttcga ggttgcgcag cgccaggatc gacggaccgg
     1381 aggcgatctg ccggggcaga tcgtgcagcg ggctcaccag actggtatcg atcttgtagg
     1441 cgtgctgcgg ctccctggct atctggtcat acggcggcgg catggtcctg ggttcctggg
     1501 tgtgctcgag gtcgatgaag aactgccagt cgatcgccca gtcggccggg accgggcgga
     1561 atccccggag atcggccgcg tcatcggcct gcgcttggcg gtagcgcccc gggaggaaga
     1621 tggggcggcg ctcgatcgtc gtgttgagcc ggtacagggg ccggatcatg gagtggccga
     1681 agcggaaggc tgccacggag aactccacgg gcatgagcct gaggccgtgc tccagctcag
     1741 gaagccctgg aatggggttg cggggatcgg cgaagacgcc cgcgtacgtc ccgctgttga
     1801 cgatcttggg caggtagtcg gtgaccagca tccactggta gtgccatcgg acctgct
//
LOCUS       DASRPQ010000908         2449 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2300990, whole genome shotgun sequence.
ACCESSION   DASRPQ010000908 DASRPQ010000000
VERSION     DASRPQ010000908.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2449
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2300990"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..340
                     /locus_tag="VFD73_10265"
     CDS             <1..340
                     /locus_tag="VFD73_10265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74390.1"
                     /translation="TDGKSVVFRSERGVQTQVLAVPIEGGPAKQLPEVSSGAHMSFSP
                     DGRLILDVRGHKALWIHPVDGSPAYKVFEFPDPDVRIDYPVWSPDGRSVLFDRAEPRT
                     GDLWMLEHAR"
     gene            460..1023
                     /locus_tag="VFD73_10270"
     CDS             460..1023
                     /locus_tag="VFD73_10270"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HZI74391.1"
                     /translation="MTATAHDARTTTWQLDPAHSSVEFSVKHMMMTTVRGRFKNVHGT
                     LTGNEERPDGCCVEVEIDVSSIDTGNADRDAHLRGADFFDAEQFKTISFRSTRVEGHP
                     ASHGDRFRVFGDLVIRDTTSQIVLDCTFEGRGPDPWGKERAGFSATTEIDRRDWGLKW
                     NQTMETGGVLVAHRVRIDVEVQFVKAD"
     gene            complement(1020..1697)
                     /locus_tag="VFD73_10275"
     CDS             complement(1020..1697)
                     /locus_tag="VFD73_10275"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HZI74392.1"
                     /translation="MIDPNALRSLEIFHGLAPATLERLAAAAVERRYAPDQVLYTTGS
                     EPAGLLVILEGSVRVVRGRNGRQQLVHEEKPGGALSEVPVFAGGGYPATAIASEPTRC
                     AMLSTAALRAIIREDADVAFVFLRRLAQRTRGLVELVDRLSSQDVNGRLAALILQRCE
                     AGAHPFVLGRTQTEVAEELGTVREVLVRALRQLRQAGLIQAVGRGRYRISDCEGLRRI
                     ATAPAGS"
     gene            1938..>2449
                     /locus_tag="VFD73_10280"
     CDS             1938..>2449
                     /locus_tag="VFD73_10280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74393.1"
                     /translation="MQNLATPGTALVLLLVSAPLSGQSAQHDAQSSPDSGFAAMQSRG
                     KIAMGVDQYTSTHRFDDLPDGGRIELQRDSSDTAGVQAIRDHLSGIARQFAEGNFDNP
                     ALAHAGNVPGTDIMRVKRSAIRYRFHPLPGGGEVRITSHDTEAVAAIHQFLAYQRREH
                     HAAGSVDHRQ"
BASE COUNT          454 a          815 c          768 g          412 t
ORIGIN      
        1 caccgacgga aaatcggtgg tgttccgctc ggagcgtgga gtgcagactc aggtccttgc
       61 ggtcccgatt gagggcggcc cggcaaagca gctccccgag gtctccagcg gtgcccatat
      121 gtcgttctcg cccgacggca ggctgatcct cgacgttcgg ggacacaaag cgttgtggat
      181 ccatccggtg gacggctcgc cggcatacaa ggtgttcgag tttcccgatc ccgatgtgcg
      241 aatcgactat ccggtctggt cgccggatgg aagatcggtt ctcttcgacc gggccgaacc
      301 tcggaccggc gatctctgga tgctggagca cgccaggtag tcatcatgtc ctcgtgaccc
      361 caatcacatc tcgcgcgcgg ctcatagggc attctctccc tgttcgctgg cctctcggtc
      421 gcaggctcct ggtggattga gaaggaaaac gaggaaacca tgactgcaac agcccatgac
      481 gcccgtacca cgacctggca gctcgacccc gctcactcga gcgtcgaatt ttcagtgaag
      541 cacatgatga tgacgacggt gcgcggtcgc ttcaagaacg ttcacggcac gcttaccgga
      601 aacgaggagc ggcccgatgg ctgctgcgtc gaagtcgaga tcgacgtctc cagcatcgat
      661 accggaaatg ccgaccggga cgcgcacctt cgcggcgccg acttcttcga tgccgagcag
      721 ttcaagacga tcagcttccg gagcacgcga gtggagggac atccggcgtc gcacggagac
      781 cggttccggg tcttcggcga tctcgtcatt cgcgacacca cttcccagat tgtgctcgac
      841 tgcaccttcg agggacgggg acccgacccc tggggcaagg agcgcgcggg cttcagcgcc
      901 acgaccgaga tcgaccggcg ggattgggga ctcaagtgga atcagacgat ggagaccggg
      961 ggcgtgctgg tcgctcaccg ggtccggatc gacgtggagg tgcagttcgt caaagcggat
     1021 tagctgccgg caggggccgt cgcgatccgc ctgaggccct cgcaatcgct gatccgatag
     1081 cgtcctctcc cgacagcctg aatcagccca gcctggcgga gttggcggag tgcgcggacc
     1141 agcacctcgc ggactgtccc cagctcctct gccacttcgg tttgagtccg gccgagaacg
     1201 aatgggtgcg ctccggcctc gcatcgctgt agaatcagcg ccgccagccg cccattcaca
     1261 tcctgcgacg acaagcgatc aaccagctcc accagccccc gggttcgctg cgccagccgc
     1321 cgcaggaaga cgaatgcgac atcggcgtct tcccggatga tcgcccggag cgcggcggtg
     1381 gagagcatgg cgcagcgggt cggctccgag gcaatggccg tcgccggata gccgcctcca
     1441 gcaaagaccg gaacctcgct cagcgcaccg cctggcttct cctcgtgcac cagttgctgc
     1501 cgcccattgc gccctcggac cactcgcacc gatccctcga ggatgaccag gagccctgcc
     1561 ggctcgcttc cggtggtata cagcacctga tcgggagcgt agcgccgctc cacggccgcg
     1621 gccgctagcc gctccagggt ggcgggagcc aggccgtgga agatctccag cgagcgtagt
     1681 gcgttggggt cgatcatgta ttcgagacga gcgtggtgga gcaaaagttc ctgacaggag
     1741 cacggcaagc cggtacgctc caggaccacg gctaaaggac cgcgccggtg cgggactctt
     1801 ccggtccgct gtaggtcgct gcgtcacaag tggatctagc atagaggcga ccgcgaccta
     1861 acgcggcctc cagagtaccc gcacgcaacg cggtccttta gcccgattca gatgtggaga
     1921 caccaggaga ccgaccattg cagaacctcg ccactccggg aaccgcactc gtccttctat
     1981 tagtcagtgc gcccttgtcc ggccaatccg cccagcacga cgcgcagtcc tcccccgaca
     2041 gtggctttgc agcgatgcaa tcgcgcggaa agatcgcaat gggagtggac cagtacactt
     2101 ccactcaccg gttcgacgat cttcccgacg gcggccggat cgagctgcag cgcgattcca
     2161 gcgacaccgc cggtgtgcaa gccattcgcg atcatctgag cgggatcgcc cgccagtttg
     2221 ccgagggcaa cttcgataac ccggcgctcg cccacgccgg taacgtcccc ggcaccgaca
     2281 tcatgcgcgt caaacgatcg gcgattcgct accggttcca tccgctgccc ggcgggggcg
     2341 aggtccggat caccagccat gatactgagg ccgttgccgc cattcaccag ttcctggcgt
     2401 atcagcggcg cgagcaccac gcggcgggat cagtggacca ccggcagag
//
LOCUS       DASRPQ010000909         1149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4507696, whole genome shotgun sequence.
ACCESSION   DASRPQ010000909 DASRPQ010000000
VERSION     DASRPQ010000909.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4507696"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1149)
                     /locus_tag="VFD73_10285"
     CDS             complement(<1..>1149)
                     /locus_tag="VFD73_10285"
                     /inference="COORDINATES: protein motif:HMM:NF033551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS1182 family transposase"
                     /protein_id="HZI74394.1"
                     /translation="LEDYIAAENPVRFLDAFVARLDLHALGFARAQPETTGRPPYDPG
                     DLLRLYLYGYLHRLRSSRRLEAETHRNVELLWLLGQLHPDFKTIADFRKDNLGPLKRV
                     CRQFVLLCRQLELFGGELLAIDGSKFKALNSREANFNEKKLEQRLGEIEAQIEGYVQQ
                     LEANDAQEAHTPPAPSREQLQEKIAALQQRQEDYEGLKGELESSGDKQLSTTDADARL
                     MHTRQGAQMSYNAQVAVDAKHKLIAAEDVTNEVTDVGQLANVALEAKDNLQIQSAEVL
                     ADTGYYNAGEVSRCVEAGLTPYVPKADTSANTARGLYGKSRFRYDETRDVYVCPAGEE
                     LSYRFETYELGRAIRYYRASGCKSCLLRKQCTRNQANRTITREENESL"
BASE COUNT          174 a          363 c          352 g          260 t
ORIGIN      
        1 tcagcgactc gttctcctcg cgcgtgatcg tccggttggc ctggttgcgg gtgcattgtt
       61 tcctgagcag gcaactcttg cagccgctgg cccggtagta acgaatcgcc cggcccagtt
      121 cataggtttc aaagcggtag cttaattcct ctcccgccgg acagacatac acatccctgg
      181 tttcatcgta acgaaaccgg ctcttgccgt ataatccccg ggcggtgttg gcgctggtgt
      241 cggctttggg cacatagggt gtcagccccg cctccacgca gcggctcacc tcgcccgcat
      301 tgtagtaacc ggtgtcggcc aatacttcgg cgctctggat ctgcagattg tctttggctt
      361 ccagtgccac gttggcgagt tgccccacgt cggtcacttc gttggtgacg tcctccgcgg
      421 cgatcaattt gtgcttcgca tccaccgcca cctgcgcgtt gtagctcatc tgcgccccct
      481 gccgggtgtg catcagccgc gcgtcggcgt cggtggtgga gagttgtttg tccccgctgc
      541 tttccagttc tcctttcaag ccctcgtagt cctcctggcg ttgctgcaac gccgcgatct
      601 tctcctgcaa ctgctcccgg ctcggcgccg ggggcgtgtg ggcttcctgc gcatcgttcg
      661 cttcgagctg ctgcacatac ccctcgatct gcgcctcaat ctcccccagg cgttgttcga
      721 gtttcttttc gttgaaattg gcctcccggc tgttgagcgc cttgaacttg ctcccgtcga
      781 tggccagcag ttccccgccg aacaactcca gctggcggca caagagcacg aactgccggc
      841 acactcgttt cagtgggccg agattgtctt tgcgaaaatc agcgatggtc ttgaagtccg
      901 ggtgcaactg gcccagcaac cagagcagct ccacgttgcg gtgggtctcc gcctcgagcc
      961 ggcgcgagga acggaggcgg tgcagatagc cgtagagata gagcctgagc agatcccccg
     1021 ggtcataggg cggacggccg gtggtttcgg gctgggcccg ggcaaagccc agggcgtgga
     1081 ggtcgaggcg ggcgacgaag gcgtcgagga aacggacggg attttcggcg gcgatgtaat
     1141 cctcgagcc
//
LOCUS       DASRPQ010000910         1823 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4507742, whole genome shotgun sequence.
ACCESSION   DASRPQ010000910 DASRPQ010000000
VERSION     DASRPQ010000910.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1823
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4507742"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1456)
                     /locus_tag="VFD73_10290"
     CDS             complement(<1..1456)
                     /locus_tag="VFD73_10290"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HZI74395.1"
                     /translation="MMQAFRNAAKPLMVVVAITFFAWLVLDLSGITGGTGLLTQTSVG
                     KVNGQSIDARTYQNIVQQAIDSRQRQSSSSMGLEDYQQVRDEVWDQLVQSNVLNAEYH
                     RRGIDVSDDEIVQAMRTSPLPEFRNVPEFQTDSQFDLGKYQRWLTSSVAQQYLPSLEA
                     QYRDELLRTKLFRLVTSDIYLSDAALWQRYRDEHEMVKVSLTAIVPRNAVPDSSIHVS
                     DAEAAAYYKAHQNDFQRPKTAFLSFVALPRIATASDTAAVRARADSARAEILGGAPFA
                     DVARRESADSASAAKGGDLGEWTKGSMDPAFDSAAFSIPLNTVSQPVRSQFGFHLVEV
                     TSRKGNKAKGRHILFPIEVTGSHRDVLDAQADSLEHLAAEKSDPAALDTVARALKLPI
                     GHSGPVQQGSRVQLGQLVVPDAGVWAFQAKVGATSPVIETSIAYYIFRLDSLQPAGVP
                     PLAQIRVSVASALRDQKKWNAAREIGKDYLKRLEQ"
BASE COUNT          357 a          567 c          554 g          345 t
ORIGIN      
        1 cctgctcgag tcgcttcagg tagtccttgc cgatctcacg agcggcattc cacttcttct
       61 ggtcgcgcag cgcgctggcc accgagaccc ggatctgcgc cagcggaggt acccctgcgg
      121 gctgcagact gtccaagcgg aagatgtaat acgcgatcga agtctcgatg accggactgg
      181 tggcaccgac tttggcctgg aaggcccaga ccccggcatc aggaaccacc agttgcccca
      241 gctggacccg gctgccctgc tgcaccgggc cggagtgccc gatcggtagc ttgagtgcac
      301 gcgcgacggt gtccagagcg gcagggtcgc tcttttctgc ggccagatgt tccagactat
      361 cagcctgggc atcgagcaca tcgcggtgac tgccggtcac ctcgatggga aagagaatgt
      421 gacggccttt ggccttgttg cccttgcggc tggtaacctc gacgagatga aacccgaatt
      481 gcgaccgcac cggctgggac actgtattga gcggaatcga gaacgccgcg gaatcgaacg
      541 ccggatccat ggagcccttg gtccactcgc ccaaatctcc ccccttcgcg gcggacgcac
      601 tgtcggctga ctctcgacga gccacgtcgg cgaaaggtgc tccccccagg atttctgcac
      661 gagccgaatc tgcccgggcc cgcaccgcag cggtatccga cgccgtggcg atacggggga
      721 gcgctacaaa gctcaagaag gcagttttgg gacgctggaa atcgttctga tgggctttat
      781 agtacgccgc cgcctcggca tcgctgacgt gaatcgagga atccggcacc gcatttcgcg
      841 gaacgatcgc ggtgagcgaa accttgacca tttcgtgctc gtcccggtag cgctgccaca
      901 gcgctgcgtc cgagagatag atgtcggagg tgaccaggcg aaagagcttg gtccgcagga
      961 gctcgtcgcg gtactgggcc tcgaggctgg gcaggtattg ctgcgccacg ctggacgtca
     1021 gccagcgttg gtatttgccg agatcgaact ggctatcggt ctggaactcg gggacgttcc
     1081 ggaattccgg cagcggggaa gttcgcatgg cctgaacaat ctcgtcatcg cttacatcga
     1141 tgccccgcct gtgatattcc gcattcagca cattgctctg gacgagctgg tcccacacct
     1201 catcacggac ctgctgatag tcttccaggc ccatcgacga agagctttgc cgctgccgcg
     1261 agtcgatggc ttgctgaacg atgttctgat aggtgcgggc atcgatgctc tggccgttca
     1321 ccttgccgac cgaagtctgg gtgaggagac cggtccctcc ggtgatgccg ctgagatcga
     1381 gcaccagcca ggcaaaaaac gtgattgcaa cgacgaccat gagcggcttg gccgcgttgc
     1441 gaaaggcttg catcatagga aaatcgaggc tccaaccgag tgttttgcga gagtcgaagc
     1501 ttaagcggac agtggcagaa cctcaaggca ccattccgct tagcagttga cacaccgagg
     1561 gccgcccact actctcccgt actccccaca gcaggtacga cgtagttttt ccgcgccaat
     1621 cctgacctcg actaccggga ccagatggcc acaactgaaa ttgaaaagct ggagcgccgg
     1681 tacgccgaaa acccgcaggg gttgacgttt gccccactcg cggaggtgca tcggaagaac
     1741 ggcgacgtcg cgcgcgccct ggagttgctt cgcgccggtc ttgagctcca tcccaactac
     1801 atccccgcca gcatcgtcct cgg
//
LOCUS       DASRPQ010000911         4236 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2301300, whole genome shotgun sequence.
ACCESSION   DASRPQ010000911 DASRPQ010000000
VERSION     DASRPQ010000911.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4236
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2301300"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1049
                     /locus_tag="VFD73_10295"
     CDS             <1..1049
                     /locus_tag="VFD73_10295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74396.1"
                     /translation="APQSSPPLRWLPACGAVLMLLLPVAVRAQDVGEISSDTRLRKEP
                     EGIPLVSLPAGTEVETREAKGDWHEVVVEGWIFTSSTSPTQRDGFDLVVSAPDGENLR
                     DSPNGEIVGRARNGALSRKLETSGTWTHVSRAGWVPRDAVNAPAAVDTPATASPSAPA
                     PNQSGTSGATAPSSPTSKAGTDSDRAAVSHETVLYATPQGGPYATLRIGAPTRILGRS
                     GDWVRVQTEGWVRADDLEETSGGALTGITAAEVRSDPNRYVGKTVEWRLQLISVQKAD
                     ELRTEIPRGQTYLLTRGPLPEPGFVYVILSESQAAEFRSLPALQELTLRVTIKAAKTK
                     YLTTPVVELVSRVG"
     gene            1168..1527
                     /locus_tag="VFD73_10300"
     CDS             1168..1527
                     /locus_tag="VFD73_10300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74397.1"
                     /translation="MDDLLKKRLARLLDSLDDRQGYQALDYLEFLTSKYAQRGQPDGL
                     LAKITSTVENTMRAGKLPMQAISGTMNLMDSATKVMRGLAAAGHAVVEEAVKAAEDVS
                     KRELPKPPPTTPDQVSS"
     gene            1643..3139
                     /locus_tag="VFD73_10305"
     CDS             1643..3139
                     /locus_tag="VFD73_10305"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HZI74398.1"
                     /translation="MTIQVESTPPVTSPPTEFIRGIGPLAAVSLVVGSMIGSGIFIVS
                     ADIGRQVGPWGPGALLVVWIVTGLMTVTASLAYAELAAMMPRAGGQYVFLREGLSPAA
                     GFLYGWTLFTVIQTGTIAAVAVAFGKFLSVLIPQITPDVFLSLGKLQLPGTPTPVELG
                     LSPQRVVAILMIVALTLLNIRGVRLGAAVQTVFSVAKIGALAVLVLLGLTLFRQPDTA
                     AANFSNFWGTANWSLAVVPVIGAAMVGSLFSADAWNNVTFAAAEVREPTKNLPRALAL
                     GTGLVCTLYVLANVAYLNILPFYGDPHGTDVIARGLQYAAQDRVGTAAIEVALGSGAA
                     AIMAVAILLSTFGCNNGLILAGPRVYYAMARDNLFFQSAGKLHPTFRTPVFGLVAQGL
                     WTAVLCISGTYGELLNYVIFATIIFYFLTTLSLFRLRRLRPDLPRPVKAFGYPVLPAL
                     YMAANAFLLIVLLADPQQRKFSALGLLIVALGIPVYLLWRRPRTSRIP"
     gene            3188..>4236
                     /locus_tag="VFD73_10310"
     CDS             3188..>4236
                     /locus_tag="VFD73_10310"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HZI74399.1"
                     /translation="MPRTPPVAPSSNGRSSGLALSGVPGLDSVMAGGYPAGHLFLVEG
                     DPGTGKTTLALQFLLEGVRRGEPGLYITLSESAAELTGVAESHGWSLDGIEVFELMPD
                     EDALQPDAQYTVFHPSEVELTTTTQRIFEVVDRVKPVRVVVDSLSEMRLLAGESLRYR
                     RQILGFKHFFTRHNATVLLLDDRTTDDGDTQLRSLAHGVILLEQLALDYGAERRKLRV
                     VKMRGVRYRGGYHDYSIRTGGIEVFPRLVAAEHHTPFERASVGSGLEELDTLLGGGLD
                     RGTCSLLMGPAGAGKTILSTQYACAAATRGNHVAFYLFDERLGTFVDRAERLGMPFQT
                     WVEKEQIHLRQIDPA"
BASE COUNT          721 a         1355 c         1328 g          832 t
ORIGIN      
        1 acgcgccgca atctagtccg cccctgcgct ggcttccagc ctgcggagcg gtgctcatgc
       61 tcctccttcc cgtggcggtt cgcgcgcagg acgtgggaga gatttcctcc gatacccggc
      121 ttcggaagga gcccgagggc attcccctgg tctcgctgcc tgccggcacc gaggtcgaga
      181 cccgcgaagc caagggcgac tggcacgagg tggtggtgga gggatggatc ttcaccagtt
      241 ccacctctcc gacccagcgc gacggcttcg atctcgtggt aagcgctccg gatggggaaa
      301 atctgcggga ctcacccaac ggggagattg tgggacgagc cagaaacggg gcgctctctc
      361 ggaagttgga gaccagcggc acctggaccc acgtgagcag agccggctgg gtgccgcgcg
      421 acgccgtcaa tgctccggcg gcagtcgaca cgcctgccac cgcatctcca tccgctccag
      481 ctcccaacca gtccggtacc agtggagcca ccgcaccttc gagccctacg tccaaggctg
      541 ggaccgacag cgaccgggct gccgtctcgc acgagaccgt cctgtacgcc acgccgcagg
      601 gcggaccgta tgcgacgctt cgtattggtg cgccaactcg tattctggga cgcagcggcg
      661 actgggtacg cgtacaaacc gaaggctggg tccgggcaga cgatctcgag gagacttcgg
      721 ggggcgcact gaccgggatt acagccgcgg aggtacgctc cgacccgaac cgctacgtcg
      781 gcaagactgt cgaatggagg ctccagctca tctcagtgca gaaagccgat gagctgagaa
      841 ccgagattcc gcgcgggcag acctacctgc tcacccgcgg tccgctgccg gagcccggat
      901 tcgtgtacgt catcctgtcg gagagccagg cggcggagtt tcggagcttg ccggcgctgc
      961 aggagctcac gctccgggta acaatcaagg cggccaagac caagtacctg acaacgccag
     1021 tggtggagct ggtctcgcgg gtaggctagg agccgggagt cggcggtagc tggctgagtg
     1081 atgggaacag gtggcgccgc ctctcacgtc ccttcatctt tctagctggc ccagctccca
     1141 actacccgct cctggcttcc agttgctatg gacgaccttc tcaaaaaacg actcgcgcgt
     1201 ctgctggact cgctcgacga tcgacaaggc tatcaggcac tcgattatct ggagttcctg
     1261 accagcaagt acgctcagcg ggggcagccc gatggactgc tggcgaagat caccagcacc
     1321 gtcgaaaaca ccatgcgtgc gggcaagctg ccgatgcagg ccatcagcgg cactatgaat
     1381 ttgatggaca gcgccaccaa ggtcatgagg ggacttgccg cggcgggcca cgcagtcgtc
     1441 gaagaggcag tgaaagccgc ggaagatgtc tcgaagcgcg agctgccgaa gccacctccc
     1501 accacccccg atcaggtatc ctcctgagct tcaccgactc ggccctgcac cgacatccag
     1561 cacgatccac gcaaaaatcg cgtctccgtg agattgctgc gctgcatgcc ctgtcccggg
     1621 ccgggacaca ccgaggagcg gtatgaccat acaggtcgaa tccacccccc cagtgacctc
     1681 cccacccacc gagttcattc gggggatagg gccgctggca gcggtgtccc tggtggtagg
     1741 ctccatgatc ggatccggaa ttttcattgt ctccgccgac atcggacggc aggtgggtcc
     1801 ctggggtccg ggcgcgctgc tcgtggtgtg gatcgtcacc ggtctcatga ctgtcaccgc
     1861 ctcgctggcc tatgctgagc tcgcggcgat gatgcctagg gccggtggac agtacgtatt
     1921 cctgcgtgag ggactctctc ctgcggcggg gttcctctac ggctggacac tcttcaccgt
     1981 gattcagacc ggcacgatcg cagccgtcgc ggtggcgttc gggaaatttc tgagcgtgtt
     2041 gattccgcag attactcccg atgttttcct gtcgctcggg aaactccagc ttcccggaac
     2101 gccgacaccg gtggaactgg gcctttcacc gcagcgcgtc gtcgcgattc tgatgattgt
     2161 cgcgctgacc ctcttgaaca tccggggtgt aagactgggg gcagcggtac agaccgtgtt
     2221 cagcgttgcc aagatcggcg cgcttgccgt gctcgtactc ctcggactga cgctgttccg
     2281 gcagcctgac accgcggcgg ccaacttctc caatttctgg ggcactgcaa actggagtct
     2341 ggcggtggtt ccggtgatcg gggcggccat ggtcggctcg ttgttctcag ccgacgcctg
     2401 gaacaacgtc acctttgccg ccgccgaggt gcgggagccc accaagaatc ttccgcgggc
     2461 gctcgcgctg gggactgggc tggtttgtac cctgtacgtc ttggcgaacg tagcgtactt
     2521 gaacattctg cccttctacg gtgatcccca cggaacggat gtgatcgcca ggggactcca
     2581 atacgcagcc caggatcggg ttgggacggc ggccatagag gtggcgctcg gttccggtgc
     2641 cgcggcgatc atggcagtcg ccatactgct ctccactttc gggtgcaaca atgggctgat
     2701 cctggccggc ccgcgcgtgt actacgccat ggcccgcgat aacctgttct ttcagtccgc
     2761 cggcaagctg catcccacgt tccgaacgcc ggtgttcggc ctggtggctc agggcctctg
     2821 gaccgcagtg ctctgtatca gcggcaccta tggcgagctg ctgaactacg tgatcttcgc
     2881 caccatcatc ttttattttc tgaccacgct gtctttgttc cgcttgcggc gccttcgtcc
     2941 cgacctgccg cgtccggtga aagcctttgg ctacccggtg cttccggcgc tctacatggc
     3001 cgcgaacgcc tttctcctca ttgttctcct cgccgatcca caacagcgga agttttcggc
     3061 gctcgggctc ctcatcgtcg ctctggggat tccggtgtat ctgctctggc ggcgcccacg
     3121 gacgtcgcgt attccttgac cggtaacgct ttcgccttga cctaccaatg cacaggattc
     3181 cgtagccatg cctcgaactc ccccggtcgc tccgtctagc aacggtcgct cctctggcct
     3241 ggcgctgagc ggcgttcctg gtctcgacag tgtgatggct ggagggtacc ccgcggggca
     3301 cctgttcctg gtggaaggcg atcccggtac cggcaagacg acgctggcgc ttcagtttct
     3361 gttggaggga gttcgtagag gggagcctgg tctctatatc acgctctccg agtccgccgc
     3421 ggagctgacc ggggtggccg agtcgcacgg ctggtcgctc gacgggatcg aagtgttcga
     3481 gttgatgccg gatgaagacg cgctccaacc cgatgcgcag tacaccgtgt ttcatccctc
     3541 ggaggtggag ctcaccacca cgactcagag gatcttcgag gtggtcgacc gggtgaagcc
     3601 ggtccgggtc gtcgtggatt cgttatccga gatgcggctc ctggccggcg aatctcttcg
     3661 ctatcgccgt cagatcctgg gattcaagca cttcttcacc cgccacaacg ccactgtcct
     3721 gctgctggac gatcgcacga ccgacgatgg agatacccag cttcggagcc tggcacatgg
     3781 cgtcattctc ctggagcagc ttgcgctcga ctacggggcg gagcggcgga agctccgagt
     3841 ggtcaagatg cggggcgttc gctatcgcgg tggctatcac gactacagca tccggacggg
     3901 gggaatcgag gtatttcctc ggctggtagc cgccgagcat cacactccct ttgaaagggc
     3961 tagtgtcggg agtggattgg aggaactcga taccctgctg ggcggcggac tggaccgcgg
     4021 tacctgctcg ctcctcatgg gacctgccgg cgccggaaag accattctga gcacccaata
     4081 cgcctgcgca gctgcgaccc ggggcaatca cgtcgccttc tatctgttcg acgagcggct
     4141 gggcacgttt gtcgaccgtg ccgagcgcct gggcatgcct tttcaaacct gggtggagaa
     4201 ggagcagatt caccttcgcc agatcgatcc cgccga
//
LOCUS       DASRPQ010000912         1175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2626413, whole genome shotgun sequence.
ACCESSION   DASRPQ010000912 DASRPQ010000000
VERSION     DASRPQ010000912.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2626413"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..558)
                     /locus_tag="VFD73_10315"
     CDS             complement(94..558)
                     /locus_tag="VFD73_10315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74400.1"
                     /translation="MRRPVWLLVPAILVAAMACGHSAPAASQVMHSGPAESQATETTF
                     YLADSGRDVTVNVGDRLSLNLGSSSDRHWVLSGFPRGLFSAPAEHPRGDFTFTALAPG
                     RTRVVVINTFACPPATVHGCSKPERGNTPSGSPAASRVPGVFTLTVHVAQDP"
     gene            850..>1175
                     /locus_tag="VFD73_10320"
     CDS             850..>1175
                     /locus_tag="VFD73_10320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74401.1"
                     /translation="MRKAALFGALILPALMVSASPAMAHSSGGGPVQEHVNARGGLDC
                     NGFSPMQKTFRHLMCTEIASNSEYGFLDNGHYVGHDEPDLGFFSNTPGSGNSMSYQMV
                     LPKDPAG"
BASE COUNT          233 a          360 c          387 g          195 t
ORIGIN      
        1 tttcggcccg aacggtcagt ggtggtggta cctggcccag ccgaggtagg cgacgacccc
       61 cgcggccagc attaaggagc cggcagtggg gattcagggg tcttgcgcta cgtgcacggt
      121 cagggtgaag acgccaggca cgcgtgaggc cgctggtgag ccgctagggg tatttccccg
      181 ctccggcttg gagcagccat ggacggtcgc cggcgggcaa gcgaatgtgt tgatcacgac
      241 gacccgcgtc cgccctggag ccagggcggt aaacgtgaag tctccccggg gatgttcggc
      301 cggagcagaa aacagccccc gtgggaaacc cgaaaggacc cagtgccggt ccgacgacga
      361 gccaaggttc aggctgaggc gatcacccac gttcacggtg acgtcccggc cggaatcggc
      421 aaggtaaaac gtggtctcgg ttgcctggct ctccgcgggg ccagagtgca ttacctggct
      481 ggcggcggga gcagagtgcc cgcaggccat ggccgcaacg aggatcgccg ggactagcag
      541 ccataccggt cgtcgcatcg atctcacctc ttacagaccg tggatcgcag ctttcgtatg
      601 tgacgcaggg cagagcccgg acgttccctc gctatcagcc cggttatctg ctcccggaat
      661 cttcctgctc tggcattcga tgcctgtgcc atggtgggcg gaagtgacgt gatgagacgg
      721 gtttgtctcc tgggtccaac gttaaaggcc gagggactgg acataatcgc acaagaagga
      781 tcaggctagc aatcgggaaa caaagtcggc ccactgaggc gaagtctcga cacgcagagg
      841 agggaccgta tgcgcaaagc cgcgctattc ggcgccttaa tactcccggc actcatggtc
      901 agcgcctcac ctgccatggc ccacagctca ggcggtggcc cggtccagga acacgtcaac
      961 gcccggggcg gcctggactg caacggtttc agcccgatgc agaagacgtt caggcacctg
     1021 atgtgcaccg agatcgcgtc gaattccgag tacggcttcc tcgacaacgg ccactacgtc
     1081 ggccacgacg agccagatct cggcttcttc tcgaacactc cagggtcggg caacagcatg
     1141 agctaccaga tggtgctgcc caaggacccg gcggg
//
LOCUS       DASRPQ010000913         1032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2626434, whole genome shotgun sequence.
ACCESSION   DASRPQ010000913 DASRPQ010000000
VERSION     DASRPQ010000913.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2626434"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..558)
                     /locus_tag="VFD73_10325"
     CDS             complement(94..558)
                     /locus_tag="VFD73_10325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74402.1"
                     /translation="MRRPVWLLVPAILVAVMACGHSGPAASQGTRSGPAASQGTETTF
                     YLADSGRDVTVNVGDRLSLNLGSSSDRHWVLAGFPRGLFSAPAEHPRGDFTFTALAPG
                     RTRVVVINTFACPPTTVHGCSKPERGNPPSGSPAASPVPGVFTLTVHVAQDP"
     gene            847..>1032
                     /locus_tag="VFD73_10330"
     CDS             847..>1032
                     /locus_tag="VFD73_10330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74403.1"
                     /translation="MRKAALFGALILPALMVSASPAIAHSSGGDLVQAHVNARGGLDC
                     NGFSPLQKTFRHLMCTEI"
BASE COUNT          198 a          318 c          344 g          172 t
ORIGIN      
        1 tttcggcccg aacggtcagt ggtggtggta cctggcccag ccgaggtagg cgacgacccc
       61 cgcggccagc attaaggagc cggcagtggg gattcagggg tcttgcgcta cgtgcacggt
      121 cagggtgaag acgccaggca caggtgaggc cgctggtgag ccgctagggg gatttccccg
      181 ctccggcttg gagcagccat ggacggtcgt cggcgggcaa gcgaatgtgt tgatcacaac
      241 gacccgcgtc cgccctggag ccagggcggt aaacgtgaag tctccccggg gatgttcggc
      301 cggagcggaa aacagccccc gtgggaaacc cgcgaggacc cagtgccgat ccgatgacga
      361 gccaaggttc aggctgaggc gatcacccac gttcacggtg acgtcccggc cggaatcggc
      421 aaggtaaaac gtggtctcgg ttccctggct cgccgcgggg ccagagcgcg ttccctggct
      481 ggcggcggga ccagagtgcc cgcaggccat gaccgcaacg aggatcgcag gaactagcag
      541 ccataccggt cgtcgcatcg atctcgcctc ttacagaccg tggatcgcag ctttcgtatg
      601 tgacgcaggg cagagcccgg acgttccctc gctgtcagcc cggttatctg ctcctggatc
      661 ttcctgcctg gcattcgatg ctgtgctgtc gtggcggcag tgacctgatg ggacgggttc
      721 gcctcctggg tccaacgtta aaagccgagg ggactggaca tattcgcaca agaaggatca
      781 ggctagcaat cgggaaacaa gccggccaac cgaggctaag tctcaacacg cagaggaggg
      841 gaccgtatgc gcaaagccgc gctattcggc gccttaatac tcccggcact catggtcagc
      901 gcctcacctg ccattgccca tagctcaggc ggtgacctgg tccaggcgca cgtcaacgcc
      961 cggggcggcc tggactgcaa cggcttcagc ccgctgcaga agacgttcag gcacctgatg
     1021 tgcaccgaga tc
//
LOCUS       DASRPQ010000914         3468 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1995032, whole genome shotgun sequence.
ACCESSION   DASRPQ010000914 DASRPQ010000000
VERSION     DASRPQ010000914.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3468
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1995032"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            174..2399
                     /locus_tag="VFD73_10335"
     CDS             174..2399
                     /locus_tag="VFD73_10335"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HZI74404.1"
                     /translation="MQFTDEWLVPSIEALLSPEAVQALRDEPGPGASLWETLVGRKQA
                     SDEQIVKAIATRFRFPLADLTTTDPKLAATVPEQLARRFNVVPVRQTDSYLEVATANP
                     FDIDAEKMLAFATGREVRMLLGSPSKIREKLDELYRETETAVTRLLEGFGGDFEVEQI
                     KEEEENAASAEQASQRPILRLVDTMIADGITNRASDIHIEPIEGGVVVRYRIDGVLRQ
                     VMKIPKSAGVPLISRIKIMSKLDIADRLRPQDGRARVSVNGEPVDLRISTLPASHGEK
                     VVIRVLNQKATTLALDSLGLAEDEQKAIRSLLGHKEGIILVTGPTGSGKTTTLYSALR
                     AVQGTGVNIVTVEDPVEYRLGENIVQVQVNEKAGLTFASALRSILRQDPDVVLVGEIR
                     DKETAQIALQASLTGHLVLSTLHTNDAPNTVTRLVDIGMESYKIAPALRGIIAQRLMR
                     RLCQKCRLVATDPVAERFTRFVPAGVTLYQAVGCSDCAMTGYRGRFSIVEVMTMTPEL
                     ERQIADGATAEKIAQAARAAGMRSLWDSGLRHVLAGESTFEELIRVTDAPREEHRVGE
                     PEVAPRPVERAPKGPVVRPRLTPVPGEFSMDMELLEEPAAPDAIALTGRGRGACVLLV
                     EDEEQLRRVMKDLLQREGYQVAEARDGIQALDEVDRFAPDVIILDLNLPGLDGYGVLS
                     QLRSRPATREIPVMVLTAKGDEDNEVRVFELGADDFVTKPFRARSLTARLEAVLGRRR
                     A"
     gene            2472..2939
                     /locus_tag="VFD73_10340"
     CDS             2472..2939
                     /locus_tag="VFD73_10340"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HZI74405.1"
                     /translation="MTSIRTSLVDVYVLRKGERGLECLLLRRGQGGRCPGSWEAVHGH
                     IEAVEQPVAAALRELEEETGLTELRLYNISRVELFYQHRSDEVSLVPVFAALVSPQSE
                     IRLGPEHDRFEWLVPELARQRFAWPRERRALEDIVALLEGGDAGAVEDVLRVC"
     gene            2933..>3468
                     /locus_tag="VFD73_10345"
     CDS             2933..>3468
                     /locus_tag="VFD73_10345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74406.1"
                     /translation="MLGRFSVLAVVCLLSQRVPRHRIADAPCVRPTRAATQVQGEVRI
                     CAGRYRISDRDEQGVIIAAASGTRIDLTGVVLESGDSVPNRYVGIGVASRGVDAVTIT
                     GGAIQGYRFGIRLEGGRGHRISGADLSGSRNQEVLSTPAKPNPADRLNLTLPDTFQRY
                     GAGILLLHTAAASITGNTA"
BASE COUNT          621 a         1091 c         1131 g          625 t
ORIGIN      
        1 tcgaatggtt catgcgcttg cttcgagtcg aggcgggggt agggctccgg gacgggcact
       61 tcgggataac ggtggacgtg aaccgggact ggtgggggct actgtaacct tcttatcttt
      121 gcctcgcgcg gcgcgcccct ggtgccgtcc ttccttcgat catccgagcc ttcatgcagt
      181 tcactgatga atggttggtg ccttccatcg aggccctgct gtctcccgag gcagttcagg
      241 ccttgcggga tgaaccagga ccgggtgcgt ccctttggga aacgctggtc gggcggaagc
      301 aggcgagtga tgagcagatc gtcaaagcga tagccacccg cttccgcttt ccgctggccg
      361 atctgaccac cactgacccc aagcttgcag ccacggtccc ggaacagctg gctcgccgat
      421 tcaacgtagt cccggtgcgc cagacagatt cgtatctgga agtcgccact gccaatccgt
      481 tcgacatcga cgccgaaaag atgctcgcgt tcgccaccgg tcgcgaagtt cggatgctct
      541 tgggctcacc ctcgaagatc agggagaagc tggacgagct gtaccgggag accgagacgg
      601 cggttactcg tctcctggaa ggattcggcg gcgacttcga ggtcgagcag atcaaggagg
      661 aagaggagaa cgcggccagc gccgagcagg ccagccagcg tccgattctc cggctggtcg
      721 ataccatgat cgccgacggg atcaccaatc gagcgagcga tatccacatc gagccgatcg
      781 aaggcggcgt ggtcgtgcgc taccgcattg acggcgtgct ccggcaagtg atgaagattc
      841 ccaagagtgc cggagtaccc ctgatctcgc gaatcaagat catgtcgaag ctcgacatcg
      901 ccgaccggct ccggcctcag gatggccggg cccgggtctc ggtcaacggc gagccggttg
      961 acctccgcat ctctaccttg cccgcctcgc acggcgagaa ggtggtgatc cgggtcctga
     1021 accagaaggc aaccaccctc gcgctggatt ccctgggatt ggcggaggat gagcagaagg
     1081 caatccgatc gctgctgggc cataaggaag gcatcatcct ggtgaccggc cccaccggct
     1141 cgggcaagac taccactctg tattctgctc tgcgtgctgt gcagggcacc ggggtcaaca
     1201 tcgtcaccgt cgaagacccg gtcgaatacc ggctgggcga aaacatcgtc caggtgcagg
     1261 tgaatgaaaa agccggactc acctttgcct cggccctgcg atcgattctg cggcaagatc
     1321 ccgatgtcgt tctggtcggc gaaatccgag acaaggaaac cgcgcagatt gcgctccagg
     1381 cctctctcac cgggcatctc gtcctctcca cgctgcacac caacgacgct cccaatacgg
     1441 tcacgcgctt ggtggacatc ggcatggagt cgtacaagat cgcgccggcg ctccggggaa
     1501 tcatcgccca acgtctcatg cgccggctct gccagaagtg ccggctggtt gctaccgacc
     1561 cggtggctga acggttcact cgcttcgtgc cggccggagt gacgctgtat caggcggtgg
     1621 gctgctccga ctgcgccatg accgggtacc ggggccggtt cagcatcgtc gaggtgatga
     1681 cgatgacccc cgagctcgag cgtcaaatcg ctgatggggc aaccgcagag aagatcgctc
     1741 aggcagcccg cgccgccggg atgcgctccc tatgggatag cggcctccgc catgtgttgg
     1801 cgggcgagtc cacgttcgag gagctgatcc gggtcaccga tgccccgcgg gaagagcacc
     1861 gagtggggga gcccgaggtt gccccccgcc cagtagagcg ggcaccgaaa gggcccgtgg
     1921 ttcgaccgag gcttaccccg gtcccggggg aattctcaat ggacatggaa ctgctggagg
     1981 agccggcggc gcccgacgcc attgcgctga ccggccgagg acgcggtgcc tgtgtgctcc
     2041 tggtggaaga cgaagagcaa cttcgccgcg tcatgaaaga cctgctgcag cgggaaggct
     2101 accaggtcgc tgaggcccgg gatggtattc aggcattgga cgaggtcgat cggtttgcgc
     2161 cggatgtgat catcctcgat ctcaacctgc ccggactcga cggctacggc gtcttgtccc
     2221 agctgcgttc ccggcctgcc actcgggaaa ttccagtgat ggtgctgacc gccaagggcg
     2281 acgaagacaa tgaggtccgc gtcttcgagc tcggcgccga tgacttcgtc accaagccgt
     2341 tcagggctcg atcgctgacc gccagactcg aagcggtcct cggtcgccgg cgggcgtgag
     2401 ggtcgactcc acccaccttc cacgcgtcct cgttcgatac acctcctccc atggcgaagc
     2461 agagtagcag catgacgtcc atccgaactt ccctcgtgga tgtctatgtc ctccgcaaag
     2521 gagagcgggg cctcgagtgt ctgctgctac gccgtggcca gggcggccgc tgcccgggat
     2581 cctgggaagc ggtgcacggc cacatcgaag cggtagagca accggtggct gccgctttac
     2641 gtgagctgga agaggaaacc ggcttgaccg agcttcggct ctacaacatc agccgggtgg
     2701 agctgttcta ccaacatcga agcgacgagg tgtcattggt acccgtgttt gcggcactgg
     2761 tatcgccgca atccgaaatt cggctgggac cggagcacga ccgcttcgag tggctggtgc
     2821 ccgagttggc gcgacagcgt ttcgcctggc cccgggagcg ccgagcgttg gaggacattg
     2881 ttgcgctgct ggagggtggt gatgcgggag ccgtggagga tgtgctccgc gtatgttagg
     2941 tcggttcagc gtcctcgccg tggtgtgcct cctctcccaa cgggtgcctc ggcaccgcat
     3001 cgccgatgct ccatgcgtga ggcccacccg ggctgctacc caggtgcagg gggaagtgcg
     3061 gatctgtgcc ggccgttacc gcatctccga ccgcgacgag cagggcgtca tcatcgcggc
     3121 ggcatccggt acccggatcg atcttacggg cgtcgtgctg gagagcggtg actcggtccc
     3181 caaccgctat gtcggcatcg gcgtggccag ccgtggggtc gacgccgtca ccatcaccgg
     3241 aggcgcgatc cagggatatc gctttggtat ccgcctcgag gggggccgcg ggcaccggat
     3301 ttccggggct gacctctcgg ggagccgcaa tcaggaggtg ctatccaccc ccgccaaacc
     3361 gaaccccgct gatcgcctga atctgacgct gcccgatacg ttccagcgct atggcgcagg
     3421 tatcctcctg ctccataccg cagcagctag catcaccggg aacaccgc
//
LOCUS       DASRPQ010000915         1116 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_737516, whole genome shotgun sequence.
ACCESSION   DASRPQ010000915 DASRPQ010000000
VERSION     DASRPQ010000915.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_737516"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(500..781)
                     /locus_tag="VFD73_10350"
     CDS             complement(500..781)
                     /locus_tag="VFD73_10350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74407.1"
                     /translation="MLPAELEFADITRGAHGHPQADQRIGTICGDPGGVGLVTFDVLS
                     GQLDGHAEGSDDAACVRDLDADRLCGLHRIVILLSQRTQLLDEELKVVF"
BASE COUNT          229 a          312 c          370 g          205 t
ORIGIN      
        1 caccgggtac ggagggaggc tgcacggaaa aggcccataa ccgcacatga gcggatatgg
       61 gacctcgccg tgcagcccac cctacgcgca gataacctcc cgatccgggc ggccgacgag
      121 ggtgaataat cggcgatccg cgcgtatggc cggtccgtgc atggtcactc actgtggcga
      181 tggcggagcg ggcgcggtgt cgctgcggcg gctcttgcca agttgatgct cacggggctg
      241 ggtcggttcc gtgcgttgag aacggacaag ccgaatgtcc agcgcgtgaa acggcgtcat
      301 agggcgtgga aggatgatga cgtggcaggc gatatccgta acaccaagcg gttccgagct
      361 gacagcactc ctgcgagagc gagccgggca ggagggggtg atgctggtcg gtggtgaagc
      421 cgagataata ctggccgacc ggatgatagc tatcgcaagc cagctcagag tgactcagcg
      481 tacggcactg gattatgtgt cagaagacaa ccttgagctc ctcatccaga agttgagttc
      541 tctggctcag gagtatgacg atgcggtgca gaccgcagag ccgatcagca tcaagatcac
      601 ggacacaggc cgcgtcgtcg ctgccctcgg catggccgtc aagctggccg ctgagcacat
      661 cgaaggtcac caggccgacg ccgccgggat caccacagat ggtgccgatg cgctggtcgg
      721 cctggggatg gccatgagcg ccgcgggtga tgtcggcgaa ttccagttcg gcgggcagca
      781 tctcgtatgg actcggaagg tacttctaag gacgatcgag ctcatcagca atggcacctg
      841 ggcctgtcct tgcgaaggtc cccacagcgg cacgtcggca tgccgcctcc agcgtcagct
      901 gacaggtgac ttgtaccttg tgggaggctg gcttccgggc gagcattagc catcaccgtg
      961 ctcagcaaag aaggacttta cttatctttc gtcccgcctt cgcaaaagac cttcatctag
     1021 atcgttgacc ggggattcgg tgcagcttgc ggagcatgcg aagagtgtcc aagatcggcg
     1081 tgttcacaca cgtctgacct tgggaagtca tcgtga
//
LOCUS       DASRPQ010000916         1636 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3872391, whole genome shotgun sequence.
ACCESSION   DASRPQ010000916 DASRPQ010000000
VERSION     DASRPQ010000916.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3872391"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..458
                     /gene="rho"
                     /locus_tag="VFD73_10355"
     CDS             <1..458
                     /gene="rho"
                     /locus_tag="VFD73_10355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682156.1"
                     /note="An RNA-DNA helicase that actively releases nascent
                     mRNAs from paused transcription complexes; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HZI74408.1"
                     /translation="TRLARAHNVVVPHSGKILSGGVDANALQKPKRFFGAARNIDKGG
                     SLSIIATALIDTGSRMDEVIFEEFKGTGNSELVLDRRLADRRIYPAIDIQRTSTRKEE
                     LLMDKDELNRVYLLRNFLADMPPVEALEFLLERMKRTKNNKEFFATMAQ"
     gene            534..995
                     /gene="ruvX"
                     /locus_tag="VFD73_10360"
     CDS             534..995
                     /gene="ruvX"
                     /locus_tag="VFD73_10360"
                     /inference="COORDINATES: protein motif:HMM:NF015607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HZI74409.1"
                     /translation="MIPTSGRILGIDWGEVRIGLALSDETQTLASPLDTLVRRAGKRF
                     PMNRLLALVSTHSPVGFVVGLPLTLEGSEAAGAAAAREVATAISSHTGLPVELWDERM
                     STARALGAIQAQGGSTRGRKAEVDALAASVLLQHFLDARRNAADPAEGAGR"
     gene            992..>1636
                     /locus_tag="VFD73_10365"
     CDS             992..>1636
                     /locus_tag="VFD73_10365"
                     /inference="COORDINATES: protein motif:HMM:NF014656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HZI74410.1"
                     /translation="MSRLPLSAPSSRARRSAVAALSILSALSILACGSSAQSDRVILP
                     PGSPFGAVTDSLKAHGVITHPRWFKLMARIRRVDRTVHAGVYEFPAGSSEWTVLGMLA
                     HGKKAALRFTVPEGLTIQEVAALAAERLGIPEDSFVAAARDGKAASALLGMQVPSFEG
                     FLRPETYILSADVTAKDLVRIMAEGFLGSWQPAWDRRLDTLKMNRLQLVTLASIV"
BASE COUNT          309 a          488 c          532 g          307 t
ORIGIN      
        1 ttacccgtct ggcccgggct cacaacgtgg tggtgcccca ctcgggcaag atcctgtcgg
       61 gcggtgtcga tgccaacgct ctgcagaagc caaagcgctt cttcggggcg gcccggaata
      121 tcgacaaggg aggcagtctc agcataattg caacggcact gatcgacacc ggaagccgaa
      181 tggacgaggt gatcttcgag gagttcaagg gcaccggcaa ctccgagtta gtgctggacc
      241 gtcgcctggc tgatcgacgg atctacccgg cgatcgatat ccagcggacc tcgacccgga
      301 aagaggagct cctgatggac aaagacgagc tcaatcgggt gtacctgctg cgcaacttcc
      361 tggcggacat gccgccggtc gaggcgctgg agtttctgct ggagcgaatg aaacgcacca
      421 agaacaataa ggagttcttc gccacgatgg cgcagtaagg cgaagcgggc ggacacagcc
      481 gaaagcggag agggcggaga ggtggatccg tcctctccgt tttaccttca ggaatgatcc
      541 caacgtcggg tcggattctg ggaattgatt ggggagaagt tcgcattgga cttgccctca
      601 gcgacgagac ccaaactctg gccagtccac tggatacgtt ggtacgtcgc gccggcaagc
      661 gattccccat gaatcgtctg ctggcgctgg tttccactca ctcaccggtg ggtttcgtcg
      721 tcggtcttcc cctgacactc gaaggcagtg aagcagcagg tgctgccgcc gcgcgggagg
      781 tcgcgaccgc catctccagc cacaccggcc tgccggtcga gctgtgggat gaacggatga
      841 gcactgcccg cgcgttgggt gcgatccagg cgcagggagg aagcacccga ggacggaagg
      901 cagaggtgga tgcgctggcc gcgtccgtgt tgctgcagca tttcctcgac gctcgacgaa
      961 acgcggcgga cccggcggaa ggagcaggta ggtgagcaga ttacctctca gcgcgccatc
     1021 cagccgtgca agacgttccg cagttgccgc tctgtccatc ctttccgctc tgagcattct
     1081 tgcctgcgga tcctcggcgc aatccgaccg ggtgattctg ccgcccggca gccctttcgg
     1141 ggctgtgacc gacagcctca aggcccacgg cgtcattact cacccccggt ggtttaagct
     1201 gatggcgcgc attcgccggg tagaccggac ggtgcatgcc ggagtttacg agtttcccgc
     1261 tgggagctcg gaatggaccg tcctcggaat gctggcgcat gggaagaagg cggccctgcg
     1321 ctttacggtg cccgaaggac tcacgatcca ggaggtggct gcgctcgctg cggagcggct
     1381 ggggattccc gaagattcct ttgttgcggc cgcgcgggac ggtaaagccg cttctgccct
     1441 gctcggtatg caggtaccct cgttcgaggg cttcctccgt cccgagacct acatcctctc
     1501 agccgacgta acggcgaaag acctggtccg gatcatggcg gagggatttc tcggttcatg
     1561 gcagccggca tgggatcggc ggctggacac cctgaagatg aatcggctcc aactcgtcac
     1621 tctagcatcg atagtg
//
LOCUS       DASRPQ010000917         1035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_737725, whole genome shotgun sequence.
ACCESSION   DASRPQ010000917 DASRPQ010000000
VERSION     DASRPQ010000917.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_737725"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..322)
                     /locus_tag="VFD73_10370"
     CDS             complement(<1..322)
                     /locus_tag="VFD73_10370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage integrase N-terminal SAM-like
                     domain-containing protein"
                     /protein_id="HZI74411.1"
                     /translation="MPIVRPRRRWPKPLDAGPFAPEVGSFGLHLAAEGKAAKTVRTYT
                     EAVAWFAAAHLLERTSCTRWEQVTCHDVQRWMVHLLSRYSDAYASNQFRALQQFFLWL
                     AEEEE"
     gene            complement(485..558)
                     /locus_tag="VFD73_10375"
     tRNA            complement(485..558)
                     /locus_tag="VFD73_10375"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(522..524),aa:Phe,seq:gaa)
     gene            complement(598..672)
                     /locus_tag="VFD73_10380"
     tRNA            complement(598..672)
                     /locus_tag="VFD73_10380"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(635..637),aa:Asp,seq:gtc)
     gene            complement(699..771)
                     /locus_tag="VFD73_10385"
     tRNA            complement(699..771)
                     /locus_tag="VFD73_10385"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(735..737),aa:Glu,seq:ttc)
BASE COUNT          185 a          341 c          330 g          179 t
ORIGIN      
        1 gctcctcctc ctcagccagc cagaggaaga actgctgcag cgcccggaac tggttgctgg
       61 cgtacgcgtc gctgtaccgg gagagcaggt gcaccatcca ccgctgcacg tcgtggcagg
      121 tgacctgctc ccacctggtg caactggtcc gctcgagcag gtgggcggcg gcgaaccagg
      181 ccaccgcctc ggtgtaggtc cgcaccgtct tggcggcctt gccctcggcc gccaggtgca
      241 gcccgaacga cccaacctcg ggcgcgaacg gcccggcgtc caagggcttg ggccaccggc
      301 gacgcggtcg cacgatcggc atcgtttttc tctcttcctg cggttccgcg gtagcgcacg
      361 catccgggcg tgagcgtttc cgcaggtcag agaacttaac gatgagcgct gacagcgcca
      421 tgggaatccc tctcttcctg ctgtctgcgc aggtgagagg gctgactgat cacccaggaa
      481 gttgtggtca ggggcagggt cgaactgccg accttccgct tttcaggcgg acgctcgtac
      541 caactgagct acctgacctg gctgggaacc ccagtgaagc ctcaccgggg atccctgcgg
      601 tcctgacggg atttgaaccc gcgacctcca ccttgacagg gtggcgagca ctccaagctg
      661 ctctacagga cctcgtactg acaaccttag tcgccatgtg cccccaacgg gattcgaacc
      721 cgtgccgccg ccttgaaagg gcggtgtcct aggccgctag acgatggggg ctccgacggc
      781 cttggccgcc ataaccgtac cagcccgccg ttggggactg ccccagcata ggggacggat
      841 cccgaaccag caaagcggag cgccctccgg ccaagcaagc tcggctacgt cggccaaatt
      901 tgcgcagtag cccttgcgaa ggccgggtac atcagacacg gtaagcgata gtgtagtcac
      961 acagtgatga caacggccga cgatctcggt cggcgtcact gggcgacctg ggggcacttg
     1021 atgtggttaa cggtg
//
LOCUS       DASRPQ010000918         2726 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1361668, whole genome shotgun sequence.
ACCESSION   DASRPQ010000918 DASRPQ010000000
VERSION     DASRPQ010000918.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2726
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1361668"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..520)
                     /locus_tag="VFD73_10390"
     CDS             complement(<1..520)
                     /locus_tag="VFD73_10390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74412.1"
                     /translation="MKATAAGPRGSGAVLVMSYPMRMRCKKDWFRAALVLFLATAPLP
                     RSPAAPPLQAQTSLTIYNDGRVLVRRSVAANIPKGNSNQRLTLGALDPATIFSLDSTV
                     NLQRVSYDGAVDEASVLRRSVGKRLVFRLSDPRDTVSALVLGVDPLRLQLPDGRISFS
                     PPGLALYPSELVV"
     gene            complement(517..744)
                     /locus_tag="VFD73_10395"
     CDS             complement(517..744)
                     /locus_tag="VFD73_10395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74413.1"
                     /translation="MSWGELCPQCLAEKKGRARRLANRISLAATVLMAAYVAMRVPAT
                     SMARIYGAIAVLATYIIVRRIATAIGMEYLK"
     gene            complement(782..1807)
                     /locus_tag="VFD73_10400"
     CDS             complement(782..1807)
                     /locus_tag="VFD73_10400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate dehydrogenase family
                     protein"
                     /protein_id="HZI74414.1"
                     /translation="MTYDVTLIPGDGIGPEITAETVKVLNATGLRFNWDEELAGMAAV
                     EATGTPLPDATVDSIRKNALALKGPLTTPVGTGFRSVNVGLRKEFELFANIRPARTII
                     PGGRFENVDIVLVRENLEGLYIGVEHFVAIGDDPRAVGESMAIVTRRGCERIIRYAFD
                     YAIKHGRRKVTIVHKANILKMVSGLFLEVGRTIAQEYAGRIESNDMIVDNTAMQLVMR
                     PEQFDVMVTTNMFGDILSDEVSGLVGGLGLAPGANIGTKAAIFEAVHGSAPDIAGQGV
                     ANPSAQMFAAAMMLDHVGELDRAERIRNAIVTTIVRDGIRTRDLGGTATTQEFGSAVA
                     QRAQRAA"
     gene            complement(1804..2460)
                     /locus_tag="VFD73_10405"
     CDS             complement(1804..2460)
                     /locus_tag="VFD73_10405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74415.1"
                     /translation="MPSISRRVVPPLYAGLLALCACRLHAQNEPKPLPPVAVLPTGQL
                     AGQTIAVLPLTLVAADPNLESDSVYAPYREHRTALLRADSLIADGVRNRGPEVTWILP
                     PQLRKIARRSAGFVEDPDQMGQAVLRSPNLTKVPDPLRSSLRGLMALTEGRMALVPAA
                     LGFTPETGGQVRADLSLVLADSRSGKILWRSLASGRGHSPDQALNAAMAAVLPANAGQ
                     "
     gene            complement(2509..>2726)
                     /locus_tag="VFD73_10410"
     CDS             complement(2509..>2726)
                     /locus_tag="VFD73_10410"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZI74416.1"
                     /translation="VNVNAVAPGFIRTERMAMLPSEVIERAQKSSVLGRVAEPDDVAH
                     VISFLCSESARHITGQIIVVDGGLSLE"
BASE COUNT          499 a          865 c          883 g          479 t
ORIGIN      
        1 tcaccaccag ctcgctggga tagagtgcca gtcccggtgg agagaagctg atgcgtccgt
       61 ccggtaactg aagccggagc gggtccacgc ccaggaccag cgcgctgact gtatccctcg
      121 gatccgacag ccggaacacg aggcgtttgc cgaccgagcg gcgcaggacg ctcgcctcgt
      181 ccacggctcc atcataggaa acccgctgca aattgaccgt ggaatcgagc gagaaaatcg
      241 tcgctggatc caaggcaccc agggtcaggc gttgattgga gttgcctttg gggatgttcg
      301 cagccaccga tcgacgcacc aacacccggc catcgttgta gatggtgagg gaggtctggg
      361 cctgcagcgg cggggcagcg gggctgcggg gcagcggggc agtggcgagg aacagaacta
      421 gagctgcccg gaaccaatcc ttcttgcagc gcatgcgcat gggataactc atcaccaata
      481 ctgccccgct gccccgcggc cccgctgccg ttgccttcat ttcagatact ccatccctat
      541 cgctgtcgcg attcgtcgga cgatgatgta ggtcgccagg actgcgatgg cgccatagat
      601 cctggccatc gaggtcgcag gcacccgcat ggcgacgtac gccgccatga gaaccgttgc
      661 ggcgagggag atgcggttgg ccagtcttct tgcacgtcct ttcttctcgg cgaggcactg
      721 ggggcagagc tcgccccacg acaaaccccg gatcctgcgg ccgcaacggg cgcatgggac
      781 ctcaggcagc ccgctgagct ctctgagcga cggcactgcc gaattcctgc gtcgtagcgg
      841 tcccgcccag gtcgcgggtc cggatcccat cacgaacgat ggtggtgacg atggcattgc
      901 ggatccgctc ggcccgatcc agttcgccca cgtgatccag catcatcgcc gccgcgaaca
      961 tctgggccga gggattggcg acaccctggc cggcgatatc gggagcgctc ccgtgcaccg
     1021 cctcgaagat cgccgccttg gtcccgatgt tggcaccggg tgccagcccg agaccaccca
     1081 ccagaccgga aacctcgtcg ctcaggatgt ccccgaacat gttggtggtg accatgacat
     1141 cgaactgttc gggccgcatc accagctgca tggccgtatt gtcgacgatc atgtcgttgg
     1201 attcaattct gccggcgtac tcctgcgcga tcgtccgtcc gacctccaga aagagtccgc
     1261 tcaccatctt caggatgttc gccttgtgga cgatggtgac cttccgccgg ccgtgcttga
     1321 tggcgtagtc aaaggcgtac cggatgatcc gttcgcagcc gcggcgggtt acgatcgcca
     1381 tcgattcgcc aaccgctcgg ggatcgtcgc cgatggcgac gaagtgctcg acgccgatat
     1441 acagtccctc gagattctcg cggaccagca cgatgtccac gttctcgaac cggccgcccg
     1501 ggatgatggt gcgggcgggc cgaatgttgg cgaacagctc gaactccttg cgcaggccga
     1561 cgttcaccga gcgaaagccg gtacccaccg gcgtcgtgag cggccccttc aaggctaacg
     1621 cgttcttgcg gatgctatcg acggtggcat cgggaagcgg agtgccggtg gcttcgaccg
     1681 ccgccatgcc ggccagctct tcatcccagt tgaatcgcag gccggtggcg ttcagcacct
     1741 tcactgtttc ggcggtgatc tcggggccga tgccgtcgcc gggaatcagc gtgacatcgt
     1801 aggtcattgt ccggcgtttg ccgggagaac cgccgccatg gcggcattga gtgcctggtc
     1861 aggcgaatgg ccccgtcccg aagcgagtga acgccagagg atcttcccgc tccgcgagtc
     1921 ggccaggacc agcgagaggt cggcccgtac ttgcccgcct gtctcgggag tgaacccgag
     1981 tgccgccgga accaacgcca tcctaccctc ggtgagtgcc atgagtcccc gcagcgacga
     2041 acgcaacggg tcgggaacct tggtgaggtt gggcgaccgc agaaccgcct ggcccatttg
     2101 gtccggatct tcgacgaacc ctgccgaccg gcgggcgatc ttgcgcagtt gtggtggcag
     2161 aatccaggtg acttccggac cacggttccg gaccccgtcg gcaatgagtg agtctgcccg
     2221 gagcagagca gtccggtgct cccggtaggg cgcgtagacc gagtcagatt cgaggttggg
     2281 gtcagccgcc acgagtgtca gcgggaggac tgcgatggtc tggccggcga gctgaccggt
     2341 gggaagcacg gcaacgggcg gcagcggttt gggttcgttc tgcgcgtgca gtcgacaggc
     2401 gcacagcgcc aaaaggcccg cgtacaacgg gggaacaact cttcgggaga tggaaggcat
     2461 gcaaaaacgt aaacgggaag gcgaacagcg taaaccagtc gctctcttct actccagcga
     2521 gagacctcca tccaccacga tgatctgccc ggtgatgtgg cgggccgact cggagcagag
     2581 aaaggagatg acgtgcgcca cgtcatccgg ttccgccact cgcccgagca ccgagctctt
     2641 ctgggctcgc tcgatgacct ccgatggaag catggccatt cgctcggtgc gaatgaatcc
     2701 gggtgccacc gcgttcacgt tgacat
//
LOCUS       DASRPQ010000919         1541 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1361780, whole genome shotgun sequence.
ACCESSION   DASRPQ010000919 DASRPQ010000000
VERSION     DASRPQ010000919.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1361780"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            769..1143
                     /locus_tag="VFD73_10415"
     CDS             769..1143
                     /locus_tag="VFD73_10415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74417.1"
                     /translation="MRKITNLMRRAAIISGVTGALIIGATATANAAEPAPAAPAAASS
                     TGLPQAAQSEDSPTSRSYGDCRAVLEGWGYDFTNYRAGLCAAASLPLPGQGTRVAICT
                     TAMSASGVLGVVSLAACTAATA"
     gene            1317..>1541
                     /locus_tag="VFD73_10420"
     CDS             1317..>1541
                     /locus_tag="VFD73_10420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74418.1"
                     /translation="MTGTDPEQLRQTIARATLPLLGDYETLTTAQIAQAAGIDEADLL
                     AVFADKEAVMQACVATLAETITAVLEPAAEV"
BASE COUNT          295 a          488 c          488 g          270 t
ORIGIN      
        1 ttggtctcag gtcggggcat ccgctgagaa gcctccctgc gaggagcaca tcgagcgcgg
       61 cgaggggcac gtcgagcgcg gctgcggcga tgtcctcgaa cccggtggat tctgccaagg
      121 cccagtgctg cgagcgagcc cgacagtggc cgcattgggt gagcacgctg gcgacgtcga
      181 ggccccggcg ctgagcgaga gctgcggaaa gcggaccacg cccggaccag gactccaaag
      241 atcatcgttg aaacggcgac tttgaatacg ccgtgtccaa cttttgaaat tccgccggga
      301 ggcgcaggct gtgcgcggcg cccgtgatct tccgcggcac cattgttgcg ggcaaggact
      361 tcgtggttag tgatcgatcg cgatgtctcc acccagcgcc gatgccagat ctcttcgtcc
      421 cctcggcatg cccttacgta ggcgagggtc acctgaagtg acggcaggcg gttgcctgag
      481 gccgccgtgg acagcgttga ggaggcgaaa tgggtacgcg ccgccagtgc cctgtagctt
      541 ggattacctg cttctaggcg aagatctcgc agtccctgcg caaaaaccgc gactgcggtg
      601 atggtcgcat taatgtcact ctctgttctt ggcacattga cccccgatga tctcagtgcg
      661 atacaaagca ttgattatgg tcaaggaaat caaccaaagt catcaacatt ccggatacct
      721 cttggttggc gcgcacatca gtgcacgtca acccacagga ggaatatctt gcgaaagatc
      781 acaaacctga tgcggcgtgc agcgatcatc tcgggcgtga caggagccct gatcatcgga
      841 gcaaccgcca ccgcaaacgc ggccgaaccc gctccggcgg caccggcagc agcctcgtcg
      901 accggcctgc cccaggcggc ccagagcgaa gattccccca ccagccggag ctacggggac
      961 tgcagggcgg tcctggaggg ttggggctac gacttcacga attaccgggc cggcctctgc
     1021 gccgcggcat cgcttcccct cccgggccag ggcacccggg tcgccatctg caccaccgcc
     1081 atgtccgcct cgggtgtgct gggggtcgtc tcgctcgcag cctgcaccgc agcaaccgcc
     1141 taggcgcggg ccagagttga tgtacggcgc ccggttgctg tttcagtaaa atcaatacgt
     1201 caaaatccgg gatccccgtg agatagccgg tgtgaggcta aggtgcttcg cgccggctat
     1261 ccgccgtcgc ggttgtgctc cttctatagc ctggtatagc ccttggagga ggaccgatga
     1321 ccggcacgga tccagaacag ctccgccaga ccatcgcgcg ggcgactctt cccctactag
     1381 gcgactacga gacgttgacc acggcacaga tcgcccaggc agcgggcatc gacgaagccg
     1441 atctcctggc ggtcttcgcg gacaaagagg cggtcatgca ggcgtgtgta gccacgctgg
     1501 cggagaccat aactgcggtg ctcgaacccg ccgcagaggt g
//
LOCUS       DASRPQ010000920         3194 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4508492, whole genome shotgun sequence.
ACCESSION   DASRPQ010000920 DASRPQ010000000
VERSION     DASRPQ010000920.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3194
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4508492"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2083)
                     /locus_tag="VFD73_10425"
     CDS             complement(<1..2083)
                     /locus_tag="VFD73_10425"
                     /inference="COORDINATES: protein motif:HMM:NF019552.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heparinase II/III family protein"
                     /protein_id="HZI74419.1"
                     /translation="MLSAEELESRQQQIAASDDLTALLQRLSQRAAPLLQRMPPLPPM
                     KAVLTADGGFCPDDGTRLEFDPWSPVQHRCPHCGRSFEGERHDAAWAHYQHLWLAERA
                     VHLATVGILGNRRDASDRANELLQAYRNYADYPNRDNVLGPSHLFFSTYLESIWLGNY
                     LSAAILLREAGQLSEDTAGIVNAIADESAGVIGEFDEGLSNRQTWHNAALASVAVWFE
                     DEELATRVIEGPSGILTHLLQGFGSDGMWYEGDNYHLFALRGQLLAMAWARQAGVDMM
                     AEPKLASRIAAALRAPALTALPDFTFPARKDSRFGVSLAQPMYLELWEVGLGRLTEDT
                     KSPADLWDWLEQVYRSPAPVAQTFDSYLQEAGEEPPKRPRTRADLSWWSLLEMVPALP
                     SGVPRWAPKSTLLEGQGLAVLRSEDRYVSLECGGVGGGHGHADRLNLVLHANGEYWLP
                     DFGTGSYVSRDLFWYRSTLAHNAPRLDSVSQPRTDAACDSFEDTGSWAWVRGRWGDVT
                     RTLVTGPSYILDVVELTAEGHVLELPLHLSGETQVESPGEWQSDHLPDEFAQGAERFV
                     SAAPGNVMLRSCGSAGTTMRVFLAGDGELLRARGPGTPGKSVLVPFYLLRASGRSVRL
                     VTVLEPTSAASSVRGVEVEQNAVSVDTVSGVDRHVATASGWQVQTGTTPVRLGGARQQ
                     VRPFEPVVQVNR"
     gene            complement(2077..3093)
                     /locus_tag="VFD73_10430"
     CDS             complement(2077..3093)
                     /locus_tag="VFD73_10430"
                     /inference="COORDINATES: protein motif:HMM:NF020133.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74420.1"
                     /translation="MIRSNPETGPAFRASAPVRLDFAGGWTDVPPFSIEEGGVVVTAA
                     IQLVAHAEVRLGGSGFRLISEDLHDHIEVADSSGLIRDGRLDLLKAGLRMLPVGGCTL
                     ATRSDAPPGSGLGSSGALDVALVAALSSARGERRDPIEIAETACHLEAIEAGIPGGRQ
                     DQFASALGGFLRLGFQGADADVERLKLDPEFMSELARRTVLCYTGATRFSGATIERVM
                     RAYQTGDATVVRALFGIRDAAEAMATALRGADIGAVGRLLTENWRHQQALDARMRTAE
                     MAQLEQLMTDAGALGGKAAGAGAGGSMFFLAPDDPTPLLAAADQAGARVLPVKWAMRG
                     VYLC"
BASE COUNT          586 a         1061 c          989 g          558 t
ORIGIN      
        1 gacggttgac ctgcaccaca ggctcaaagg gacgcacctg ctgcctggct cccccgagac
       61 gcactggggt cgtgccggtc tgaacctgcc aaccggatgc ggtggcgacg tgccggtcga
      121 cgccggatac cgtgtcgaca cttaccgcat tctgttccac ttccaccccg cgcacgctgg
      181 atgcggccga cgttggttcc agcaccgtca ccagccggac gcttcgtccg cttgcccgca
      241 gcagatagaa aggaaccagt actgacttcc ccggagtgcc gggtccccgg gcgcgaagca
      301 gctcaccgtc accagcgagg aataccctca tcgttgtacc cgctgaaccg caggaacgga
      361 gcatgacgtt gcccggcgct gccgaaacga accgctcggc tccttgagcg aattcgtccg
      421 gcaaatggtc ggactgccac tcgccgggtg actccacctg ggtttcgccg ctcaggtgga
      481 gcgggagctc gagcacatga ccctctgcgg tgagctcgac cacgtccagt atgtagctgg
      541 gtccggttac gagggtgcga gtaacatctc cccaccgacc cctgacccag gcccagctac
      601 cggtgtcctc aaagctgtcg caggctgcat cggttctcgg ctgtgacaca ctgtccagac
      661 gcggtgcatt gtgagccagc gtagatcgat accagaaaag atcgcgcgac acatacgatc
      721 cagtcccgaa gtcgggcagc caatattcac cattggcgtg tagcaccagg ttgagtcggt
      781 cggcatgacc atgtccccct cccacgccac cgcattcgag gctgacgtag cgatcttccg
      841 agcggagcac cgccaggcct tgcccttcga gcaaggtgct ctttggcgcc cagcgtggga
      901 cgccgcttgg cagtgctggt accatctcca gcagggacca ccaggagaga tcggcgcggg
      961 ttcgcggccg cttgggcggc tcctcgcccg cttcctgcag ataggaatcg aacgtttgtg
     1021 cgacgggagc cggcgatcgg tatacctgtt cgagccagtc ccatagatcg gcaggcgatt
     1081 tggtgtcctc agtcaaacga ccaagcccga cctcccagag ctcgagatac atcggctgcg
     1141 ccagcgacac gccgaagcgc gaatctttcc gggccgggaa ggtaaagtcc ggaagcgcgg
     1201 tgagcgctgg agcacggagc gcggcggcga tcctggatgc gagctttggc tctgccatca
     1261 tgtccactcc cgcctgacgg gcccaggcca tcgcgagcag ctggcctctg agagcaaaga
     1321 gatggtagtt gtctccctcg taccacatcc catcgctgcc gaagccctgg agcaggtgcg
     1381 tcaggatgcc gctcgggcct tcgatcaccc gggtcgccaa ctcttcatct tcgaaccaca
     1441 ccgccacact ggcgagcgca gcgttatgcc aggtctgccg gttggagagg ccttcgtcga
     1501 actcaccgat gacaccggcc gattcgtcgg cgatggcatt gacgatcccg gccgtgtcct
     1561 cgctcagctg tccggcttca cgcagcagaa ttgccgcgct caggtagttg cccagccaga
     1621 tcgattcgag ataggtggag aagaacagat gactgggacc aagcacattg tcacggttgg
     1681 gatagtcggc atagttcctg taggcttgca ggagttcgtt ggctcgatcg ctggcatccc
     1741 gccggttgcc caggattccc actgtcgcga gatggaccgc ccgctcggcc agccagaggt
     1801 gctggtaatg ggcccacgcg gcatcgtgtc gctctccttc aaaagatcgg ccgcagtggg
     1861 ggcagcggtg ctgcaccgga ctccagggat cgaattccag acgggttccg tcgtccgggc
     1921 agaatccccc gtcggcggtg agcacggcct tcattggggg aagcggcggc atccgctgca
     1981 gcagcggtgc ggctcgttgg gatagccgct gcaataacgc ggtgagatcg tcagaagccg
     2041 cgatctgctg ttgcctggat tccagctcct ccgcgctcag cacaggtaga cccctcgcat
     2101 cgcccatttc accggcagca cccgggcacc ggcttggtct gcggccgcga gcaagggggt
     2161 cggatcgtcg ggagcaagaa agaacatgga cccacccgcg ccggcgcctg cagccttgcc
     2221 acccagcgca ccggcgtcgg tcatcagctg ttccagttgc gccatttcag ccgttcgcat
     2281 ccgggcatcc agcgcctgtt ggtggcgcca gttttcagtc aagagccggc cgacagctcc
     2341 gatgtcggcg cctctgagtg cggtggccat ggcttcggcg gcgtcccgta tgccgaacag
     2401 cgctcgcacc actgtcgcgt cgccggtttg gtacgcccgc atgacccgct cgatcgtagc
     2461 tccggaaaag cgggtggcgc cggtatagca gagcacggta cggcgcgcca gctcggacat
     2521 gaattccggg tctagcttca gtcgttccac gtcagcgtcg gcaccctgga agcccagacg
     2581 caagaagccg ccgagagcgg aggcaaactg gtcctggcga cctccgggga tcccagcttc
     2641 aattgcctcg agatgacatg ccgtctccgc gatctcgatc ggatcccgcc gctcaccccg
     2701 cgccgatgaa agcgcggcca ccagtgcgac gtccagcgcg ccggagcttc cgagtcccga
     2761 tcccggcggg gcatcggaac gagtggcgag ggtacagccg ccgactggaa gcatccgaag
     2821 accggccttg agcaaatcca ggcggccgtc tcggatcaga ccgctggaat ccgccacctc
     2881 gatgtggtcg tgcagatctt ccgatatcag acgaaatccg ctgccaccta ggcgcacttc
     2941 cgcgtgggcg acgagctgga tagcagcagt caccactacg ccgccttctt cgatcgagaa
     3001 cggaggcacg tcggtccagc ccccggcaaa atcgagccgg accggcgccg aagctcgaaa
     3061 cgcaggtccg gtttccgggt tactcctgat caccgatcca cccaccagtc gtgcaccgtc
     3121 ggaagctcgc cccggagatc catggtgact ccatgaagcc ggcgattgat cccctggaga
     3181 cctcgtggat gata
//
LOCUS       DASRPQ010000921         1166 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3249119, whole genome shotgun sequence.
ACCESSION   DASRPQ010000921 DASRPQ010000000
VERSION     DASRPQ010000921.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1166
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3249119"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          213 a          385 c          361 g          207 t
ORIGIN      
        1 ccgggcactg cggctgatcc cgccgggaca gcaccggcac aggactggcg aagtagcctg
       61 aggtagcgcg gacccgatag gtccgtcgat ctgcacaaat cgcgatcatc gggtccgcgc
      121 accggtaatt ccagcatcga cgcgcccggg acgttacagg cctctgacat cccatcgcct
      181 cgaaagcaga tccgatcgct ccaaccggac cggtatccgg acaggttctt accgccaaag
      241 gcgacacgca agacggtgat cagttatcag aggtaatgat ccattacctc tgataactcg
      301 tcgaccgtcc tgcgggaacg taggactcgg cgtgacctga ctcgcacgcg ttatctctga
      361 tagcacgcgg cacgaccgtc ggcgggtctg gctccatcga gtcacacctg gttcactccg
      421 ccgtggagtc cggcatctcc agcttgaccc tggcaggccg accgggcgcc ctgtcgaccc
      481 ggaagaacac gatctcccgg gccggttccg cctgatgcca tcgggttggg ccggattacc
      541 gcagatcgga gaaagtaccg tgtctgagcg cgtcgcgctc cgtctggcgc tgccaggagg
      601 cgttgtcact tgatttgtca ctgacttcag gatctctgtc cgaactggag tccggctggg
      661 ccgaatccca tcgacgacga aacccatggt ctccgagccg acagacgggc cagcgctacc
      721 gcaacgacag cgcgccgacg gccggtaaga agccagggcg tccagcccgg gcggcgccgg
      781 tgtccgccag cctacggacc gccgaggagc ttcgattaaa gtccgcgagg gaacggatgg
      841 acattatctc tggccacggc gaggtgggta tctaccgtgg cgccgccgtg gcctgtggca
      901 cggaatctcg ctgtcggtca tggtccttcc ttcccctcgg agccgaagcc cggctgagct
      961 gacctaccga gtacagcgct gagtccgccg tcgcccgcca cgtgaaatgg ttgcccaggc
     1021 aaggtatgga acgatcgctg ctgcgcttgg ttctgattcg tctatgaagg tgagccaacg
     1081 ctcccagcga catcccgccc ggttacagct cccggtgggt ctacccgagc agtggccgct
     1141 cggccagaga ttcgcgggcc tcttcg
//
LOCUS       DASRPQ010000922         1453 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1676085, whole genome shotgun sequence.
ACCESSION   DASRPQ010000922 DASRPQ010000000
VERSION     DASRPQ010000922.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1453
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1676085"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            19..921
                     /locus_tag="VFD73_10435"
     CDS             19..921
                     /locus_tag="VFD73_10435"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HZI74421.1"
                     /translation="MRFLAPHLLGLDPTNVSGFQRSMDAALMGHQYAKSAVDIACWDL
                     RGKAAGLPIAALLGGVLQKDFPLYEAVPLGSPESMASFAGRRIAAGIKRFQLKVGNNP
                     REDAARTRAVVEAVTDDTIVIADSNGGWSLLDARIAMNSMTGLPVFIEQPCRTTEDSA
                     LASRDSKLPLVLDESIVTLSDVYEAKRSAGVSSINIKISRAGGITGAALMRDVMQELN
                     LMVSVEDMWGGDLITAAVSHLAASTRRESLLMTSFMNDWTDGHIAGYRPRSVSGRGSA
                     PTGPGLGIEIDTSLLGEPVFSVEA"
     gene            1186..>1453
                     /locus_tag="VFD73_10440"
     CDS             1186..>1453
                     /locus_tag="VFD73_10440"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="HZI74422.1"
                     /translation="MPTLPRVGDELAGYRLRGVLGRGGMSVVYEAENPRLGSTVALKV
                     LASELATNDLFRARFLRESRIAASLNHPNVIPIYDMGTHEDLLFI"
BASE COUNT          240 a          458 c          489 g          266 t
ORIGIN      
        1 gagggcgttc gcaccgcatt gcggttcctg gccccgcatc tcctggggct cgacccgacg
       61 aacgtgtccg gcttccagcg cagcatggac gcggcgctca tggggcacca gtacgcaaag
      121 agcgcagtcg acatcgcctg ctgggacctg cggggcaagg cagccggatt gccgatcgcc
      181 gcgctccttg gcggcgtgct ccagaaggac ttccccctct atgaggccgt gccgctgggc
      241 tcgccggagt cgatggcatc gtttgccggg cgccgcatcg ctgcggggat caagcggttc
      301 cagctcaagg tcggcaacaa cccgcgcgag gatgcggccc gcacccgggc cgtggtggag
      361 gcggtaaccg acgacacgat cgtgatcgcc gattcgaacg gcggctggag cctcctcgac
      421 gcgcgcatcg cgatgaattc catgaccggt cttcctgttt tcattgagca gccgtgccgc
      481 accactgagg acagcgctct cgcctcgcgc gacagcaagc ttcctctggt tctggacgag
      541 tcgatcgtca ccttgtccga cgtctacgag gccaagcgct ctgccggggt ctcctcgatc
      601 aacatcaaga tcagccgggc cggcggtatt accggtgccg cgctgatgcg cgatgtgatg
      661 caggagctga acctcatggt ttcggtggaa gatatgtggg gcggcgatct gatcaccgct
      721 gcggtcagcc acctcgcggc gagtacccgc cgggaaagcc tgctgatgac ctcgttcatg
      781 aacgactgga ccgacggtca catcgccgga taccggcccc ggtcggtcag cggccgcggt
      841 tctgccccca caggtcccgg tctcggcatc gagatagata cctcgcttct cggcgagccg
      901 gtgttctcgg tggaggccta gcaggagagc cggctagcca ggcctccctg gccgcccgaa
      961 caggcaactt ggccccaccg cgcatagtgg aagccgtgct ggatgcgtac aatgacctca
     1021 gcttgaccac ggcggggggt ctagatatgc gagtcggcgt cgccgggggt aaactgccct
     1081 attggcgtgc cacgctgcgc caggggcatc tcctccagaa gctgagccca tccccggccc
     1141 aatggtattc ggggttccgg acgttcgctt gatcggagtg atgtgatgcc cacattgccc
     1201 agggtgggag acgagctagc tggttaccgg ctgcgcgggg tgctgggccg gggcgggatg
     1261 agtgtggttt atgaggcgga gaatccgcgt ctgggcagca ctgtggcgct caaggtgctg
     1321 gcgtcagaac tcgcgaccaa cgacctgttc agggcccggt tcctgaggga gtcgcggatc
     1381 gcggcctcgc tgaatcaccc gaatgtgatc ccgatctatg acatgggcac gcatgaggat
     1441 ctgctgttca tcg
//
LOCUS       DASRPQ010000923         3651 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1048994, whole genome shotgun sequence.
ACCESSION   DASRPQ010000923 DASRPQ010000000
VERSION     DASRPQ010000923.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3651
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1048994"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..205
                     /locus_tag="VFD73_10445"
     CDS             <1..205
                     /locus_tag="VFD73_10445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74423.1"
                     /translation="KHPDRPAINYARGDVIVMTMKQGVKTGVDQVEVRGQVDGVQLEA
                     ADTPPADSLAPRADSLRRGRAGR"
     gene            202..1356
                     /gene="lptB"
                     /locus_tag="VFD73_10450"
     CDS             202..1356
                     /gene="lptB"
                     /locus_tag="VFD73_10450"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR04406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HZI74424.1"
                     /translation="MTAAPEWVAALGDRDPSVPIALAAIVRAAGPSDSIAFSDLVHGY
                     REAHLACYQGDDQELSGDEVREHLHQSVLPRLATEGWILDTSSGYWQTVRPRVAWWGS
                     APAEREIVYRALLTAARRAVQKATSFTRTRPRGSLLEGLDLSKSFRGRRVVDRVSVRV
                     EQGEIVGLLGPNGAGKTTTFYLITGLILPDDGRVLLDGVELTNAPMYQRARNGIGYLA
                     QEPSIFRRMTVEENILAILETRPLKRDERYRQLDRMLDELSIKHLRRNKAYSLSGGER
                     RRLEITRALVSDPKFMLLDEPFAGVDPIAVHDIQTIVAGLRHRGIGVLITDHNVEQTL
                     DIVDRAYIMFEGRVQASGTVRELVYDDRVAQLYLGPTLTARLRARLEAVA"
     gene            1353..2912
                     /gene="rpoN"
                     /locus_tag="VFD73_10455"
     CDS             1353..2912
                     /gene="rpoN"
                     /locus_tag="VFD73_10455"
                     /inference="COORDINATES: protein motif:HMM:TIGR02395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HZI74425.1"
                     /translation="MRTGLSQHTSLRQELRVNPRLYQAMDMLYMPMMDLQQHLKQELL
                     ANPFLELLEPEDEATEQPAAEETKEQKEKQEEVDWEEILLNGFEVGGTREQYEQLEYT
                     EPVTVETRNLIDHLREQLQMLTLSPRQLLLAEEFLGNINEEGYLAASLEEILGSVNHL
                     VSGHLHPEKREETEDDATDEAEEAPPTELAPAAAHTNSGPPAEPSAAADPSAYYTMQD
                     AEEMLAIIQRLDPSGVGARDLRECLLIQLVELADTSSLTYRLVNEAFPDLIAHRWNDL
                     AKRFAVEPAAVQSAADQLSRLDPKPGLKYSEQSDGYIIPDLIVEKIGGRYQVFLNDTG
                     MPRLRLSRSYQEIARDKKKMTPENREFIASKMNSANWMIQAIEQRRQTMLKVMNFIVD
                     RQRDFFEKGIEYLKPLTLREVAEVINMHESTVSRVTNEKYVQTPRGVLPLKFFFSSAL
                     STASGEDASARSIRAKLEKMVGEENTAKPLTDQQIVHLFQEQGIQIARRTVAKYRDQL
                     GILPARMRKRV"
     gene            2909..>3651
                     /locus_tag="VFD73_10460"
     CDS             2909..>3651
                     /locus_tag="VFD73_10460"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HZI74426.1"
                     /translation="MTIATVDTLDVSVLVPAKDEADNLPEFIERCSRALGPAGFSFEV
                     IVVNDGSRDGTDRVLRELERQYDFLEVVTHRRQRGIADALRSAGQVARGDVFVFYPAD
                     LQYLPEDIPGLVAPILEGRADIVTGTKQGKYEKAFVSTIYNGLCRWLFGVRVTDLNSV
                     KAYRREVMLGVPLRPDWHRYMVVIAAAEGYRLTSIPVPLYPRRAGTSKFNWRRIPVGL
                     FDLVSVWFQLRFGRKPMLFFGVGGAFLFI"
BASE COUNT          711 a         1143 c         1145 g          652 t
ORIGIN      
        1 caagcacccc gatcggccag cgatcaacta cgctcgtggc gacgtgatcg tcatgacgat
       61 gaagcaaggc gtgaagaccg gcgtcgacca ggtagaagtt cggggccagg tggacggagt
      121 ccagctggag gcggcagaca ctccgccggc cgactctctg gcgccgcggg ctgattcgct
      181 ccgccgagga cgggcaggtc gatgaccgcg gctccggaat gggtagcggc gcttggcgat
      241 cgtgatccct cggttccgat cgccctggcc gccattgtac gagcggccgg tccgtcggac
      301 agcatcgcct tctccgacct ggtccacggc tatcgcgagg cgcatctcgc ctgttaccag
      361 ggagacgacc aggagctttc gggcgacgag gtgcgcgagc atctgcacca gtcggtgtta
      421 ccccggcttg ccaccgaggg atggatcctc gatacctcgt cgggctattg gcaaaccgtt
      481 cgtccgcggg tcgcctggtg gggctcggcg cccgccgaac gggagatcgt ctatcgggcg
      541 ctgctcactg ccgcccggcg cgcagtccag aaggccacct cgttcacgcg caccaggccg
      601 cgcgggagct tgctcgaggg actcgatctc agcaagagct tcaggggacg gcgagtggtc
      661 gatcgggtga gcgtccgggt agagcagggc gaaatcgtgg gactgctagg gccgaacggg
      721 gcgggaaaga ccacgacctt ctaccttatt accggtctga tccttcctga tgatggtcgg
      781 gtgctgctcg acggtgtgga actgaccaat gcgccgatgt atcagcgggc gcgcaacggc
      841 attggctatt tggcgcagga gccttcgatt ttccggagaa tgacagttga ggagaatatc
      901 ctggccatcc tggagacccg ccccttgaag cgcgacgaac gctatcgcca gctcgaccgc
      961 atgctggacg agttgtcgat caagcatttg cgccgcaaca aggcgtattc gctcagcggc
     1021 ggcgagcgac gccgtttgga gatcacgcga gccctggtct ccgatcccaa gttcatgctc
     1081 ctggacgagc cgtttgccgg cgttgatccc attgccgtgc acgacatcca aaccatcgta
     1141 gccggattgc gccaccgcgg aatcggtgtc ctcatcaccg atcacaacgt ggagcagacc
     1201 ctcgacatcg ttgaccgggc gtacatcatg ttcgaaggcc gagtccaggc ctccggcacc
     1261 gtgcgcgagc tggtctacga cgaccgggtc gcccagctct atctcggtcc cacgctcacc
     1321 gccagactgc gcgcgcggct ggaggcagta gcatgagaac cggcctctcc cagcacacca
     1381 gcctgcggca ggagcttcgg gtcaatccgc ggctgtatca ggccatggac atgttgtaca
     1441 tgcccatgat ggacctgcag cagcacctga agcaggagct gctggccaat cccttcctgg
     1501 agctactcga gccggaggat gaggccaccg agcagccggc agccgaggag accaaggagc
     1561 agaaggagaa acaagaggaa gtggactggg aggagattct gctcaacggc ttcgaggtgg
     1621 gaggcacccg agagcagtac gagcagttgg aatacaccga gccggtcacc gtcgaaaccc
     1681 ggaacctgat cgatcatctc cgcgagcagc tccagatgct gacgctgagt ccgcggcagc
     1741 tgcttctggc ggaggagttt cttggcaaca tcaacgagga gggctacctc gcggcctcac
     1801 tcgaagagat cctgggctcg gtgaatcatt tggtttcggg acacctgcac cccgagaaga
     1861 gggaagagac cgaagacgac gcaacggacg aagcggagga agcgccaccg acggaacttg
     1921 ctcccgccgc cgcccacacg aattccggcc caccggccga accatccgct gctgccgatc
     1981 cttccgccta ctacaccatg caggacgccg aagagatgct ggccattatc cagcggctgg
     2041 acccttcggg cgtcggagct cgcgacctcc gggaatgcct gctgatccag ctggtggagt
     2101 tggctgacac cagctccctc acctatcggc tggtgaacga ggcatttcct gacctgatcg
     2161 cgcaccgctg gaacgatctg gccaagcgat tcgcggttga gcccgcagcg gtacaaagcg
     2221 cagccgatca gctttcccga ctcgacccca agcccggtct caagtactcc gagcagagcg
     2281 atggctacat cattcccgat ctcatcgtcg aaaagatcgg ggggcgctac caggtgttcc
     2341 tgaacgacac cggtatgccg cggctgcgcc tgagccggtc ctaccaggag atcgctcgcg
     2401 acaagaagaa gatgaccccg gaaaatcgcg agttcattgc ctccaagatg aacagtgcga
     2461 actggatgat tcaggccatc gagcagcggc gccagacgat gctcaaggtg atgaatttca
     2521 tcgtagaccg gcaacgtgac ttcttcgaga agggcatcga atacctcaag ccgctgacgc
     2581 tgcgcgaggt ggctgaggtc atcaacatgc acgagtccac cgtgagccgg gtgaccaacg
     2641 agaagtacgt gcagaccccg cgcggcgttc tcccgctgaa gttcttcttc tcgtcggccc
     2701 tctccaccgc gtccggcgaa gatgcgagcg cccggtccat ccgtgccaag ctggagaaga
     2761 tggtcggcga ggaaaacacc gccaaaccgc tcaccgatca gcaaatcgtc cacctcttcc
     2821 aggagcaggg gatccagatc gcccggcgta cggtcgcgaa gtaccgcgat cagctcggca
     2881 tacttccggc ccgaatgcgg aagcgggtat gaccatcgcg acggtcgaca cgctggatgt
     2941 cagcgtgctc gtcccggcga aggacgaggc agacaatctt cccgagttca tcgagcgctg
     3001 ctcccgggcg ctcggccccg ccggattctc ttttgaggtc attgtggtca acgacggctc
     3061 gcgcgacggc accgatcggg tgctccgcga gctggaacgg cagtacgatt tcctggaggt
     3121 tgtgacccat cgcaggcaac gcggcatcgc cgacgcgctc cgctcagcgg ggcaggtggc
     3181 tcgcggtgac gtgttcgtct tttatcccgc agatctgcag taccttcccg aagacatccc
     3241 cggcctggtt gcccccattc tggaagggcg ggcggatatc gtcaccggca ccaagcaggg
     3301 caagtatgag aaggcgttcg tgtccaccat ttacaacgga ctttgccgct ggctgttcgg
     3361 ggtgcgggtg actgatctca actcggtgaa ggcctatagg cgcgaggtca tgctcggggt
     3421 tccgttgcga cccgactggc accggtacat ggtggtcatt gccgcagcag aagggtatcg
     3481 gctcacctcg atcccggtcc ccttgtaccc ccgccgagcg ggaacttcca agttcaattg
     3541 gagaagaatt cccgtgggcc tcttcgatct cgtctcggtc tggtttcagc tccgcttcgg
     3601 cagaaagccg atgctcttct tcggcgtggg cggcgctttt ctcttcatca t
//
LOCUS       DASRPQ010000924         1340 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1362987, whole genome shotgun sequence.
ACCESSION   DASRPQ010000924 DASRPQ010000000
VERSION     DASRPQ010000924.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1340
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1362987"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..760)
                     /locus_tag="VFD73_10465"
     CDS             complement(<1..760)
                     /locus_tag="VFD73_10465"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI74427.1"
                     /translation="MTEQPAVSFAELLKRLRTDAGLTQEELAERAHVSPRSISDLERG
                     INKTARQDTTRLLADALNLSGTARAGFETAARGYRDAESGMLARPRARSRSVAATTPV
                     LPRDIKSFTGREAHLAKLMAAVKENGSVVGIYAIDGMAGVGKSAFAVHAAHVLAPRFP
                     DGQIFLQLHAHTGGHQPVDAADALASLLLTTGAAAEQIPPTLSDRSSLWRSHLAGRRV
                     LLLLDDAASHQQVEPLLPGTPGSLVLITSRRHLSA"
     gene            1033..1200
                     /locus_tag="VFD73_10470"
     CDS             1033..1200
                     /locus_tag="VFD73_10470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74428.1"
                     /translation="MLNLFLILAALTGLPALTEVGRVLMSFLVRLIGLAFAMALVMIV
                     LLALATHGKVI"
BASE COUNT          237 a          441 c          417 g          245 t
ORIGIN      
        1 gcgcgctgag gtgccgacgg ctggtaatca ggactaggct ccccggggtt cccggaagca
       61 gcggctcgac ctgctggtgg ctggccgcgt cgtccagcag caacagaact cgcctgcccg
      121 ccagatgaga acgccacagg gaggagcggt cactcaacgt cggcggaatc tgctcggcgg
      181 cggcccccgt ggtgagcagc aggctggcca gcgcatcagc cgcgtcaacg ggctggtgac
      241 cgcccgtatg ggcatgcaac tgcaggaaga tctggccgtc cggaaatcgg ggcgccagga
      301 catgggcggc gtggactgcg aacgcactct tgccgacccc ggccatgccg tcgattgcat
      361 agatgccgac gacacttcca ttttccttaa cggcggccat cagcttcgcc aagtgggcct
      421 cacgaccagt aaagctcttg atgtcacgcg gcaggacggg cgtggtggca gctactgacc
      481 tggagcgcgc acgaggccga gccaacattc cggactcggc atcgcggtag ccgcgtgctg
      541 ccgtctcgaa ccccgcccga gccgtgccgg acagattcag tgcatcagcg agcaaccgcg
      601 tcgtatcctg gcgtgcggtc ttgttaattc cccgctccag gtcgctaatc gaccgcgggc
      661 tcacgtgtgc ccgctccgcc aattcctcct gcgtcaatcc tgcatcagtt cgtagccgtt
      721 tcaacagctc agcgaaactc accgcaggtt gctcggtcac gaccgagacc cttcccctcc
      781 cgcgcctgtt gccgccatac cctcggctac cgcaacaagg gacactcccc ataagggtat
      841 acgaggaact tctgagacgg aagttcctcg ccatcgcagc actgccatcg gctgctcagg
      901 actccgcgcc gaacgtcaga tctccgacgt ggtcacagga acagatcatg tgagcacatt
      961 ttccgggtcc tgtgtggtgc taattcctgt ccggccgcac ggtgaagaca acaccgaagg
     1021 gaggtggacg ggatgcttaa cctcttcctc atcctcgcgg ccctgaccgg gctgccggct
     1081 ctcacggagg tcggacgggt cctcatgagc tttctagtgc gactcatcgg ccttgccttc
     1141 gctatggcgc ttgtgatgat cgtgctgctg gcactggcta cgcacgggaa ggtgatctga
     1201 cgagctggac gtggcgccac gggacctggc cgggcaggac cggccggtgg cccgttccgc
     1261 gaagtgacgt atgcggtagt cgaccggatc ggtccagtgc cgcatctgtc tacgacgctc
     1321 gcagtcgacg atctgctagc
//
LOCUS       DASRPQ010000925         1073 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1997403, whole genome shotgun sequence.
ACCESSION   DASRPQ010000925 DASRPQ010000000
VERSION     DASRPQ010000925.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1997403"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(12..503)
                     /locus_tag="VFD73_10475"
     CDS             complement(12..503)
                     /locus_tag="VFD73_10475"
                     /inference="COORDINATES: protein motif:HMM:NF019128.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall hydrolase"
                     /protein_id="HZI74429.1"
                     /translation="MRWVLLAVLLVACAVDDRVVEMIEPVVPLKAGDVDTLARVLWGE
                     ARGEGRAGLEAVAWVVVNRVRQPGTRFPDTISGVCRQPFQFSCLNKSDPNAKRCAAVS
                     EADPTFLAALSVATDVLSGRVPDPVGGAQYYFVSNMKDPPNWRKAMQLKAKIGAHSFY
                     WEP"
     gene            complement(537..>1073)
                     /locus_tag="VFD73_10480"
     CDS             complement(537..>1073)
                     /locus_tag="VFD73_10480"
                     /inference="COORDINATES: protein motif:HMM:NF019126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HZI74430.1"
                     /translation="GIMLWYGALADVPAGWALCNGSVYSKSDGSGSITSPDLRDRFIV
                     GAGSTYAVGGTGGATSATTSSSGAASAVATSASGDHNHTGSTDGHTLSTSEIPSHRHQ
                     QNTGQGSAGAVTGWNVVSNATTALTSLYTEYSGGGGSHSHGLQSSGTHTHTVDVSSHT
                     HTVSTMSPYYALAFIMKL"
BASE COUNT          181 a          352 c          341 g          199 t
ORIGIN      
        1 agcggcaccg gtcagggctc ccagtaaaag ctgtgcgctc cgatcttcgc cttcagctgc
       61 atggccttcc gccagttcgg tgggtccttc atgttggaaa cgaaatagta ctgggccccg
      121 ccgacggggt ccggcacccg gccggacagc acatccgtgg cgacactgag cgccgccagg
      181 aaggtggggt cggcctcgct gacggccgcg cacctcttgg cattcggatc tgacttattc
      241 aggcaggaga actggaacgg ctgccgacag acaccgctga tggtgtcggg gaaccgtgtt
      301 cccggctgcc ggactctgtt gaccacgacc caagcgacag cttccagccc ggctcgtccc
      361 tcgccgcgcg cctcgcccca cagcaccctg gcgagggtgt cgacgtctcc ggccttcagc
      421 ggcaccacgg gctcgatcat ttccaccacc ctatcgtcga cggcgcaggc aaccagcaga
      481 acggccagca gcacccaccg cattacattt aatcggccgg aatttttgtc acgcggtcac
      541 agtttcatga tgaacgccaa cgcatagtat gggctcatcg tgctcaccgt gtgtgtgtgg
      601 ctggagacgt ccaccgtgtg cgtgtgggtg ccggaggact ggagcccatg ggaatggctc
      661 cctcctcccc cgctatactc ggtatagagc gatgtcagcg cggtggtggc gttcgacacg
      721 acgttccacc cggtgaccgc gcccgccgat ccctggccgg tattctgctg gtggcggtgg
      781 gatggaattt ccgatgtgct gagggtgtgg ccatcggtgg agccggtgtg attgtgatcg
      841 ccagacgcac tggtcgccac ggcggaggcc gcgccgctgg agctggtggt ggcggaggtg
      901 gctcccccgg ttccgccaac ggcataggtc gaaccggcac ccacgatgaa cctatcgcgc
      961 aggtcaggac tggtgatgct gccgctgcca tcgcttttgg aatagaccga cccgttacac
     1021 agcgcccacc ctgcgggcac gtccgccagg gccccgtacc aaagcattat gcc
//
LOCUS       DASRPQ010000926         6981 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1363090, whole genome shotgun sequence.
ACCESSION   DASRPQ010000926 DASRPQ010000000
VERSION     DASRPQ010000926.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6981
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1363090"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            207..698
                     /locus_tag="VFD73_10485"
     CDS             207..698
                     /locus_tag="VFD73_10485"
                     /inference="COORDINATES: protein motif:HMM:NF016089.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HZI74431.1"
                     /translation="MTELRLPASVLQGILARAALVFLRFYLGVIFLIAGVPKLQEDFA
                     IRLTGFLRSVALTKGYVFYQEFAQQELLPHVRLLAGFVSWAEVLVGAALILGLATRLV
                     SALAIVLLVNYMLAKGAWFGSPASNDAALLAIAVALIIGAAGRTLGVDAVLARRWPRS
                     ALW"
     gene            complement(721..2844)
                     /locus_tag="VFD73_10490"
     CDS             complement(721..2844)
                     /locus_tag="VFD73_10490"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HZI74432.1"
                     /translation="MSKSRRTLAWPGPASPLAVSHNESVPGTGPSLPQAPVAPHVRVV
                     HGETRIDNYHWLRNRSDPEVIAYLEAENRYADYVMQHTEGLQEQLYREMRGRIQETDL
                     SVPERRDHYLYYRRIESGRQYPVFCRRLTSAEGDEEIILDLNQLAVGHDYFRVGGWEV
                     SPDHRLLAYTVDVSGSEEFSLFIKDLQSGTLLPETILQTSNSPTWANDSRTLFYCVLD
                     GSRRPYRLYRHQVGTSQQDDVLVYIEPDASFYMEISRTRSGDFVLLDLSSHTTSEVWF
                     TPAEQPTQPFRLIQPRRPGIEYSVTHHGDRFFITTNDAAPNFRLVQAPVAHPSHEHWA
                     PVLPYRPEVKLDGADAFRGHLVVHEREAGLRHLRVIDFASGQEHLIPFPEAVCTVRPH
                     ANPEFDSKTFRFGYTSLVTPNSVVDYDLEQQTWTLRKQTHVGGGYDPSQYQSERLLAT
                     APDGTLVPISLVSRGPLNRGRPRPVFLSGYGAYGLTYDPAFSPNTLSLLDRGVIVAIA
                     HVRGGEEMGRPWYEAGRRLAKRTSFTDFIACAEHLIAERLTTPDQLVINGGSAGGLLI
                     GAVLNLRPDLFLAALAEVPFVDVVNTMLDPSLPLTVIEYDEWGNPSDPEAYAYIRSYS
                     PYDNVEPKGYPHLLITAGLNDPRVAYWEPAKWAAKLRATKTDQNRLLLRTNMDAGHGG
                     ASGRYDSLRETAFKYAFVLDVLGLG"
     gene            complement(3082..3726)
                     /locus_tag="VFD73_10495"
     CDS             complement(3082..3726)
                     /locus_tag="VFD73_10495"
                     /inference="COORDINATES: protein motif:HMM:NF025701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease complex subunit PrcB family protein"
                     /protein_id="HZI74433.1"
                     /translation="MFHRSGMLIPVLILTGCGGSTMRVAKDDPADGSGPVSLAPAPDP
                     GPDSTVASRGASENPAAPAPPTTQPDSSTPGPTQGYAPYGAGTSGLELRRIGQWTNTG
                     ISESRRLVIRNANAWAQFWAELGVGDRPTIDFTKYLVVAVAAGQRSSGGYEISIQRVS
                     QANGDLTIEVLQTVPSPNCVTTSALTQPVDVVAVPAVGAQGWSFLERQEVRGCR"
     gene            3926..4519
                     /locus_tag="VFD73_10500"
     CDS             3926..4519
                     /locus_tag="VFD73_10500"
                     /inference="COORDINATES: protein motif:HMM:NF016764.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0031267 - small GTPase binding [Evidence
                     IEA];
                     GO_process: GO:0006888 - endoplasmic reticulum to Golgi
                     vesicle-mediated transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Yip1 family protein"
                     /protein_id="HZI74434.1"
                     /translation="MDLVQRVKQILLSPRTEWQVIEAEPTTTAELYKTYIIPLAAVGP
                     ISQVIGYSVFGITVPFVGTYRVPIGSAISGALVAYVLTLAGTYVLALIIDGLAPTFNG
                     QRSQIQALKVAAYSSTASWLAGIFALIPGLRLLAILGVYSLYLLYLGLPIVMKSPRDK
                     ALGYTVVVIVAAIVLFMIIGVIAGRFLAVPTAGTIVP"
     gene            4663..6147
                     /locus_tag="VFD73_10505"
     CDS             4663..6147
                     /locus_tag="VFD73_10505"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HZI74435.1"
                     /translation="MIRRQSHTNSPLRARMLMLGAGLAAGWIGCARNPVTGKSELSLV
                     SESQEIEMGKQAAQEVAQTIGLYNDAQATAYVSGIGKRMAAASERPNLPWEFHIVEDA
                     SVNAFALPGGFIYVTRGLMATINDEAELATVVGHEIGHVTNRHSVQQISKQEVAQLGL
                     GIGSILSSDIAKFGQLASAGLSVLFLKYSRDAENQADQAGFRYALNQNYDVREMTKVF
                     ETLDRISKSSGGGKLPEWLETHPDPGNRIQHIESFLDTLHRDPSKGITNREGYLQHVQ
                     GMIYGEDPRQGYFEGTQFYHPQMRFQLTFPTGWQVQNTPQAVAAMSPNQDAIMQLGLA
                     GQGSPQQAAQQFLSQQGVQAGQSSTSNINGLPAASSYFQAQTDQGAIQGIVSFISYGG
                     QTFGLMGYTPAGKLGSYDQVFQSTIRSFNQLRDPAKINVQPAKVELVKLDRQMTLEQF
                     NSQYPSSISVAELAIINEVEDPSTPLQAGRTVKRVVGGLQKKPS"
     gene            complement(6209..6469)
                     /locus_tag="VFD73_10510"
     CDS             complement(6209..6469)
                     /locus_tag="VFD73_10510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74436.1"
                     /translation="MVHVRDVISADSLVGRRVRVSGRCTSAGTGPRAGSWILEEEGET
                     IEVRGLVPYSCSSETAQQLTIFAQIEPIAPGSHERLLLRLPD"
     gene            complement(6715..>6981)
                     /locus_tag="VFD73_10515"
     CDS             complement(6715..>6981)
                     /locus_tag="VFD73_10515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74437.1"
                     /translation="FTMADGRIYVNSMGLDPQILEATYREVANCRRSGIMINTFMLAR
                     DRSLVEFVKQVASICKGKAYFTNTMTLGQFILMDFMKRKTRRVS"
BASE COUNT         1376 a         2087 c         2159 g         1359 t
ORIGIN      
        1 atcattgtct cgcatgagga ccgctgcctc gcgcgcggtc gaattcgggg tgcagcaggc
       61 tgggtcgggc gtcatcacgt cacgtactct cacggctccc cctggaaagt gttggcccaa
      121 gatccacctc gctcgcgagt cgcgcggtga cctgcgtaac tttccgcgcc catggccctg
      181 agccagtgtc ccccacctcg tcccctatga ccgagctaag actccctgcc tctgtgctgc
      241 aggggattct cgcccgagcc gctctcgtct tcctacgctt ttacctagga gtgatctttc
      301 tgatcgccgg tgttcccaag cttcaggaag attttgcgat caggcttacc ggatttctcc
      361 gcagcgttgc tctcaccaag gggtatgtct tctatcagga gttcgcgcaa caggaactgt
      421 tgccccacgt gcgtctgttg gccggattcg tcagctgggc ggaggtcctg gtgggcgccg
      481 cactgattct gggattggca acccgcttgg tgtcggcgct ggcaatcgtg ttactggtga
      541 actatatgct ggcaaaagga gcctggtttg gctctcccgc aagtaacgat gcagcgctgc
      601 tggccatcgc cgttgccctc ataatcgggg ccgcaggacg cacgctcggt gtggacgcgg
      661 tgcttgcccg caggtggccg cgctcagcac tgtggtagcg ctgggcacca gcgcccatct
      721 tcagccgagc cccagcacgt cgagcacgaa ggcgtatttg aacgccgtct cccgcagcga
      781 gtcatagcga cccgaggctc cgccatggcc ggcatccatg ttggttctga ggagaagccg
      841 gttctgatcg gtcttcgtgg cgcggagctt ggctgcccac ttggcgggct cccagtatgc
      901 cacacgcgga tcgttcagtc ccgcagtgat aagcaggtgg gggtacccct ttggctcgac
      961 gttgtcgtac ggcgagtatg atcgaatgta agcgtacgcc tccggatcgc tcggattgcc
     1021 ccactcatcg tattcgatca ccgtcagcgg caacgaggga tccaacatcg tgttgaccac
     1081 atcgacgaac ggaacctcgg cgagtgccgc caggaacagg tccggtcgta agttgagcac
     1141 cgcaccgatg aggaggccgc cggcactgcc gccattgatc accagctggt cgggtgtggt
     1201 caagcgctcg gcgatgaggt gctcggcaca ggcaatgaaa tcggtgaagc tggtacgctt
     1261 cgccaatcgc cgtccggctt cgtaccacgg ccgccccatc tcctctccac ctcgcacatg
     1321 ggcaatcgcg acgatcaccc ctcgatcgag tagactgagg gtgttgggcg aaaacgccgg
     1381 atcgtaggtc aatccgtaag cgccatatcc actgagaaag actggacggg gtctgccgcg
     1441 gttgagcgga cctcgggaga ccagggagat cggcaccaga gtgccatctg gcgcagtggc
     1501 gagcagacgc tcactctggt attgcgatgg gtcgtaccca cctcccacgt gagtctgttt
     1561 ccgcaacgtc cacgtctgct gttccaggtc atagtccacc acggaattcg gcgtcaccaa
     1621 cgaggtgtag ccgaatcgga aggtcttgct gtcaaactcc ggattcgcgt gcgggcgcac
     1681 cgtacaaacg gcttcaggga agggaatcag atgttcttgc ccagatgcaa agtcgatcac
     1741 ccgaaggtgg cgcaaacctg cctcgcgctc gtgaaccacc aagtgaccgc ggaaggcatc
     1801 ggcaccatcc agtttcactt ctggccggta gggcagcacc ggagcccagt gctcgtgtga
     1861 ggggtgcgct actggagctt gcaccaatcg gaaattgggt gcggcatcgt tcgtggtgat
     1921 gaagaaccga tctccgtgat gcgtaacgct gtactctata cctggacgcc gaggctggat
     1981 gaggcggaaa ggctgagtcg gctgttcggc aggtgtgaac cacacttcgg aggtggtgtg
     2041 gctggagagg tcgagcaaca cgaagtcgcc gctgcgcgtc ctgctgatct ccatgtagaa
     2101 ggaagcatcc ggctcgatat agaccagaac gtcgtcttgc tggctggtgc ccacctggtg
     2161 ccgatacagc cgatatgggc gccggctccc atccaggaca caatagaaga gagttcggct
     2221 gtcgtttgcc caggtcgggc tgttcgatgt ttggagaatc gtctcgggca gaagcgtgcc
     2281 gctctgcaga tccttgatga aaagcgagaa ctcttcggag cctgaaacgt cgaccgtata
     2341 tgccaacagg cggtggtcgg ggcttacctc ccagccgcct acccggaagt aatcgtgacc
     2401 tacagccaat tggttcagat cgagaatgat ctcctcatca ccctccgcgc tggtgagacg
     2461 gcggcaaaag actgggtact gtcttcccga ctcgatcctg cggtaataca ggtaatggtc
     2521 cctccgctcg ggaaccgaga gatctgtctc ctggattctt ccccgcatct cccgataaag
     2581 ctgctcctgt agcccttcag tatgctgcat gacatagtcg gcataccgat tctccgcttc
     2641 caaataggcg atgacctcgg gatcagaccg attcctgagc cagtgatagt tatcgattcg
     2701 ggtctctcca tggaccaccc gcacgtgagg agccaccggc gcttgcggaa ggctgggtcc
     2761 cgtgcccgga acggattcat tgtgggatac ggcgagcgga ctggctgggc cgggccaggc
     2821 gagagtacgg cgagatttcg acatcgtgtt ctagttctct ggccgtgcgg aggggccgga
     2881 cgagcgttca gatggaccac cagagttggg tcctgggcgg aattacggcg ggtgctcagt
     2941 gcaagtcaag cggagataag tgtcgaatct accgtaacct agcagacagg gcagtggggg
     3001 aggacaggag ctcggctgct cctgcccgca tctccagata ctaccaacac atacgagcag
     3061 gagaggtaag gcgaccgcat ttcagcggca tccgcggact tcctggcgct ccagaaaact
     3121 ccagccctga gcgccaactg caggtacggc cacaacatcc actggctggg tgagggccga
     3181 cgtagtgacg cagttcgggc tggggacagt ttgtaagact tcaatcgtga ggtccccgtt
     3241 ggcctgagaa acccgctgaa tcgagatctc ataccccccg ctggaccgct gacccgccgc
     3301 aactgccaca accagatact tggtgaagtc gatggtgggg cggtcgccaa cccccagctc
     3361 agcccagaat tgggcccagg cattcgcgtt gcgaatcacg agtctgcgtg attcactgat
     3421 tccggtgttg gtccactggc ctatccgccg gagctcgagg ccggacgtcc cggcgccgta
     3481 cggggcatag ccctgagtgg ggcctggggt actggaatcg ggctgcgtcg tgggcggcgc
     3541 aggagctgct gggttctcac tggcgcctct ggatgctacg gtagaatccg gccccgggtc
     3601 aggcgccggt gccaatgaga cgggaccgga tccatcagcc ggatcgtcct tagcgacgcg
     3661 catggtggat ccgccgcagc cggtcaggat caataccgga atgagcatac cgcttcgatg
     3721 aaacatcatg gttactcccc gaaggagaaa cggcctgcta taaggtgcaa cctaagaaga
     3781 agctacgtcg taagtgagcg gtccgcatct cctgccccgg tgagcatcat caccacaggt
     3841 tctcggtgtg ccgatctgga cgcgccctct ttgccggcac atactcacca cgcgtcggca
     3901 tcgctccccc taaaaggagt ctctgatgga cctcgttcag cgcgtcaagc agatcttgct
     3961 gtctccccgt accgagtggc aggtcatcga ggctgagcca accacgaccg ccgagctcta
     4021 caagacgtac atcatcccgc tggcagcggt cggccccatc tcgcaggtca ttgggtattc
     4081 ggtattcggc attacagtgc cgttcgtggg gacgtaccgg gtgccgatcg ggtcggcgat
     4141 cagcggcgcg ctggtagcct acgtcctgac actcgccggc acctacgttt tagcgctcat
     4201 catcgacgga ctggctccca cgttcaacgg gcagcgcagt cagattcagg cactcaaggt
     4261 tgccgcctat tccagcacgg ccagctggct ggccggcatc ttcgccctga ttcccgggct
     4321 tcgccttctc gcgatcctgg gtgtgtacag tctgtacctc ctgtacctcg ggcttccgat
     4381 tgtcatgaag tcgccccgtg acaaggcgct gggatacacc gttgtggtga ttgtcgccgc
     4441 gatcgttctt ttcatgatca tcggggtgat cgccggacgt tttctggctg ttccaacagc
     4501 cggcacgatc gtgccctaga gtgcgggcgc ccaactacga gcgttcggct gtaggcgacg
     4561 gggatcacag agccgaagtt ggcacggctt tagcatggag actccccggc atcgccggga
     4621 cagctcggtc cacctggcga cacgagaact aagggagccc ctatgattcg tcgtcaatcg
     4681 cataccaact caccactccg ggcccgcatg ctcatgctcg gcgccggact ggccgcaggc
     4741 tggatcggct gcgcacggaa tccggtgact ggaaagagtg agttgtctct ggtgtcggaa
     4801 tcgcaagaaa ttgagatggg aaagcaagcg gcacaggaag tggcacaaac gatcggcctc
     4861 tacaacgatg cccaagcgac ggcttacgtc tccggcatcg gcaagcgtat ggcggccgcg
     4921 tccgagcgcc cgaatctgcc ctgggagttt cacatcgtgg aagatgcttc agtgaacgcg
     4981 ttcgctctgc ccggcggctt catctacgtc actcgggggc tcatggcgac gatcaacgat
     5041 gaggcggagc ttgcgaccgt ggtgggacac gagatcggac acgttacgaa ccgccactcg
     5101 gtccagcaga tcagcaagca agaggtggcc caactcggcc tcggcatcgg gagcatactc
     5161 tcgtctgaca tcgccaagtt cggccagctc gccagcgccg ggctcagcgt actgtttctc
     5221 aagtacagcc gggacgccga gaaccaggca gaccaggcgg ggttccgcta cgcgctgaac
     5281 cagaactacg acgttcgcga gatgaccaag gtgttcgaga cgctggaccg gatcagcaag
     5341 tcgagcggag gcggcaagct ccccgagtgg ctggagactc accccgatcc ggggaaccga
     5401 attcagcaca tcgaaagctt tttggataca ctgcaccgcg accccagcaa agggataacc
     5461 aatcgggagg ggtatctaca gcacgtacag gggatgatct atggtgaaga cccccggcag
     5521 ggctatttcg agggtactca gttttaccac ccccagatgc gttttcagtt gaccttcccg
     5581 acgggatggc aggtccagaa tacgccccag gccgtggccg ctatgagtcc caatcaggat
     5641 gcaatcatgc agctgggtct ggctgggcaa ggctcgccgc agcaggcagc tcagcaattc
     5701 ctatcgcagc aaggcgtgca ggctggtcaa tcgtcaacca gcaacatcaa tgggttgccc
     5761 gcggcgtcca gctatttcca ggctcagacc gaccagggag cgatccaggg catcgtgtcc
     5821 ttcatctcct atggaggcca gacgttcggc ttgatgggct ataccccggc cggcaagctt
     5881 ggctcctatg atcaagtgtt ccagagcacg attcggagtt tcaaccagct tcgcgatcca
     5941 gccaaaatca atgtccagcc ggccaaagta gagctggtca agttggatcg acagatgaca
     6001 ctggagcagt tcaactcgca gtatccgtcg tcgatctcag ttgccgagct cgctatcatc
     6061 aacgaagttg aggatccgtc aacgccgctc caggccggaa gaacggtgaa gcgggtggtg
     6121 ggaggcttgc agaagaaacc gtcctgagcc gacgaataaa tccggtgagt ggggccgctg
     6181 tccgaactcg ggcagcggtc ctattgcttt aatcgggtag ccgcagcagc agccgctcgt
     6241 gactgcctgg cgcgatcggc tcgatctggg caaagatggt aagctgttgg gctgtctcgc
     6301 tgctacagga gtagggtacc agcccgcgca cttcgatcgt ttcaccctcc tcttccaaga
     6361 tccacgaccc cgcccggggg ccggttccgg cagaggtgca gcggccggac acccgcaccc
     6421 gcctgccgac cagcgagtca gccgaaataa catcgcgtac gtgtaccacg ggtgcctggt
     6481 cggggcggag cggaacgtcc gctcgggcgg caactccgcc cgttcctctg ctagctggag
     6541 taacctgggg cgttccagtg gtgccggggc caggagccgg cccggccgca ggcgttggcg
     6601 ttcccgggtc gcggggggta gcggtgcgtg acgagcaccc gccaaccagt aggagcaaga
     6661 ggaaagcagg agaggtcgaa cgcacccagt ggagagcgaa gcggaagggc acgcctagga
     6721 gacgcgccgg gttttgcgct tcatgaaatc catgaggatg aattgaccca gcgtcatggt
     6781 gttcgtgaag tacgccttcc ccttacaaat cgaggccacc tgtttgacga attccaccag
     6841 actgcggtcc cgggcaagca tgaaggtgtt gatcatgatg ccggagcgcc ggcagttggc
     6901 gacttcacgg taggtggctt caaggatctg aggatccagt cccatggagt tcacgtagat
     6961 cctgccgtcg gccatggtaa a
//
LOCUS       DASRPQ010000927         1247 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2930121, whole genome shotgun sequence.
ACCESSION   DASRPQ010000927 DASRPQ010000000
VERSION     DASRPQ010000927.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2930121"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            146..844
                     /locus_tag="VFD73_10520"
     CDS             146..844
                     /locus_tag="VFD73_10520"
                     /inference="COORDINATES: protein motif:HMM:NF014708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HZI74438.1"
                     /translation="MIQVRKAAERGHFDHGWLDTYHTFSFGDYSDPARMGFRSLRVIN
                     DDRVAPGQGFGMHGHRDMEIVTYVLDGALAHKDSMGNGSILRAGELQRMTAGTGVRHS
                     EFNPSDTEWVHLYQIWLLPQRQGLKPSYEQLAVGEDPRRNGFRLVASPEGTDGALTIH
                     QDARLYLASLSPGEGVPHEIEPGRAAWLQVLRGSVNVLGHDLAAGDGVAVTDENAISI
                     QATVPSEVLLFDLA"
     gene            856..>1247
                     /locus_tag="VFD73_10525"
     CDS             856..>1247
                     /locus_tag="VFD73_10525"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HZI74439.1"
                     /translation="MSQVLRGPLTVLARLLLCTIFFMAAVGNKIPHFSDVAKVMESVG
                     VPAPQVMLAGAIVFLLAGSLSVIAGFKARIGAVLLLTFLVLASYYFHPFWKLEGQAQQ
                     EQMIHFMKNLSMMGAMLFIVASGSGPMSL"
BASE COUNT          221 a          393 c          385 g          248 t
ORIGIN      
        1 gccatctgtc gcaaggcgat gtgaaagacc tcatccggct actggaaaag ctgcgggagc
       61 cgtggactgc ttcggacgag tagcggtttt tttgggcata tagttgatat gtgcattatc
      121 agcatgtaaa caacaggagg cagtcatgat ccaggtccgc aaggctgccg agcggggcca
      181 cttcgaccac ggctggctcg acacctacca cacgttttcc ttcggcgatt actccgatcc
      241 cgcccgcatg ggcttccgct ccctccgggt catcaacgac gaccgggttg cacccggcca
      301 ggggttcggg atgcacggcc accgggacat ggagatcgtc acctacgtcc tcgacggggc
      361 gctcgcacac aaggacagca tgggcaacgg ctcgatccta cgggcaggcg aattgcagcg
      421 catgaccgct ggcaccggcg tccgccacag cgagttcaac ccctcggaca cggaatgggt
      481 ccatctctac caaatctggc tgctgcccca gcggcagggg ctgaagccga gttacgagca
      541 gctggccgtg ggggaagacc ccaggcgtaa cggctttcgt ctggtggcct cgcccgaggg
      601 taccgacggc gccctgacca ttcatcaaga cgcccgcctg tacctggcct ccctgtcgcc
      661 gggagaaggc gttccccacg agatcgagcc gggtcgggcg gcgtggctcc aggtgcttcg
      721 aggcagcgtg aacgtcctcg gccatgatct tgccgctggc gatggcgtgg ccgtcaccga
      781 cgagaacgcc atctcgattc aggctactgt tccgtccgaa gttctgttgt tcgatctggc
      841 ataaggagag ttaccatgtc tcaagtgctt cgaggcccgc tgaccgtcct ggctcgcctg
      901 ctgctctgca cgatcttctt catggctgct gtgggcaaca agattcccca cttcagcgac
      961 gtggcgaagg tcatggagtc cgtgggcgtc ccggccccgc aagtcatgct ggcgggggcc
     1021 atcgtcttcc tgctcgccgg cagcctgtcg gtcatcgccg gattcaaggc ccggatcggc
     1081 gctgtcctgc tgttgacgtt cctggtcctg gcctcctact acttccaccc cttctggaaa
     1141 ctggaagggc aggcccagca ggagcagatg atccacttca tgaagaatct gtccatgatg
     1201 ggagcgatgc tcttcatcgt ggcgagcggt tcagggccga tgagcct
//
LOCUS       DASRPQ010000928         1963 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_425003, whole genome shotgun sequence.
ACCESSION   DASRPQ010000928 DASRPQ010000000
VERSION     DASRPQ010000928.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1963
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425003"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(35..1405)
                     /gene="nrfD"
                     /locus_tag="VFD73_10530"
     CDS             complement(35..1405)
                     /gene="nrfD"
                     /locus_tag="VFD73_10530"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HZI74440.1"
                     /translation="MAIPRVGIAGQPADPVLQGRPGDAELTDRLLTPLWGRWRGWWLL
                     FGVSALGTLWLGVTVTYTVITGIGVWGNNIPVAWAYAIINFVWWIGIGHAGTFISAFL
                     LLLNQRWRASVNRIAEAMTLFALVNAALFPLLHLGRPWFFYWLLPYPTRMSVWPQFKS
                     ALPWDVAAVATYFTVSLLFWYLGLVPDLATARDTAPTVRRRKVYGIFALGWRGSAQQW
                     QQYRIAYLLLAGVATPLVISVHSVVSLDFSISQLPGWHSTIFPPYFVVGAIYSGFAMV
                     LILLLPVRRVFGLEDIITRRHLDNMAKLLLTTGLMLAYSYIVEVFIAWYSGDLYERYT
                     YLTARPLGPYSVIFWAMIAANVLTPQLFWFRRLRTSVPVLFAASLVILAGMWTERFII
                     IVTSLNRDFLPSSWHYYAPTWVDWSILLGTVSFFSLLFLLFIRFVPFVALHEMKQLRY
                     ELGGGA"
     gene            complement(1407..>1963)
                     /locus_tag="VFD73_10535"
     CDS             complement(1407..>1963)
                     /locus_tag="VFD73_10535"
                     /inference="COORDINATES: protein motif:HMM:NF024247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HZI74441.1"
                     /translation="PEIVAQPMLCQHCEQAPCEYVCPVGATEHSPDGLNEMVYNRCVG
                     TRFCSNNCPYKVRRFNWFNYNANVSETEAMAKNPDVTVRARGVMEKCTFCVQRIRAAE
                     IEAGISGRPIRDGEFTTACAQACPTDAIIFGSFTDPASNVAQRGAEPRAYAVLHELGT
                     EPRVRYLARVTNPNPALAEPPHEL"
BASE COUNT          429 a          597 c          631 g          306 t
ORIGIN      
        1 gcggcgctgc cgaattcggc gatgagacct ctcttcatgc cccacccccc agctcgtacc
       61 gcagctgctt catctcatgc agcgccacga acggcacgaa acggatgaac aggagaaaga
      121 gaagcgaaaa gaagctcacc gtcccgagca ggatcgacca atcgacccag gtcggtgcgt
      181 agtagtgcca gctcgacggc aggaaatcgc ggttgagcga tgtgacgatg atgatgaacc
      241 gctcggtcca catccctgcc aggatcacga gtgaggcggc aaacagcaca gggacgctgg
      301 ttcggagtcg ccggaaccag aagagctggg gcgtgaggac attcgccgcg atcatcgccc
      361 agaagatcac gctatagggt ccgagcggac gggcggtcag ataggtgtag cgctcgtaca
      421 ggtcgccgct gtaccaggcg atgaacacct caacgatata gctgtacgcc agcatgaggc
      481 cggtggtgag cagaagcttg gccatgttat ccaggtggcg ccgggtgatg atgtcctcca
      541 ggccgaacac ccggcgtacc gggagcagca ggatcagcac catcgcaaac ccggaataga
      601 tcgcgcctac gacgaaatac ggcgggaaga tggtcgaatg ccatccgggg agctggctta
      661 tggaaaaatc gagactcacc acgctgtgca ccgagatgac caggggcgta gccacaccgg
      721 cgagcagcag ataggcaatc cggtattgtt gccactgctg ggccgaaccc cgccacccca
      781 gcgcaaagat gccgtacacc ttgcgtctac ggacggtggg cgccgtatcc cgtgcggtag
      841 cgaggtcggg taccagcccg agataccaga acaagagcga gacggtgaag taggtcgcca
      901 ccgcagcgac atcccagggc agggcgctct tgaactgggg ccagacactc atcctggtcg
      961 gatacgggag cagccaatag aaaaaccagg gccggccgag atggagcaac ggaaacaacg
     1021 ccgcattgac cagcgcaaag agcgtcatcg cttccgcgat gcgattcacc gatgcccgcc
     1081 atcgctgatt gagcagcaga agaaatgccg agatgaacgt cccggcgtgg ccgatcccga
     1141 tccaccagac gaagttgatg atcgcgtacg cccaggcgac gggaatgttg ttcccccaga
     1201 cgccgatccc ggtaatgacg gtgtaggtca ccgtgacgcc gagccagagt gtgcctagcg
     1261 cgctcacccc gaacagcagc caccaccctc tccaacgacc ccagagcggt gtgagcaatc
     1321 ggtcggtcag ctcggcgtcg ccgggacgtc cttgcaggac cgggtccgct ggttgacctg
     1381 ctatcccgac gcgagggatc gccacgctag agctcatggg gaggttcggc cagcgcagga
     1441 ttcgggttgg tgactcgggc caggtagcgc accctaggct cggtaccgag ctcgtggagg
     1501 acggcgtagg cccggggctc ggccccacgt tgagcaacgt ttgacgcggg atcggtgaag
     1561 gagccgaaga tgatcgcgtc ggtaggacag gcctgggcgc acgcggtggt gaactcgccg
     1621 tcccggatcg gccggccgga aatgccggcc tcgatctccg ccgcccggat gcgctgcacg
     1681 cagaacgtgc acttctccat cacaccacgc gcccggacgg tcacgtccgg gtttttggcc
     1741 atcgcctcgg tctcggaaac attggcgttg tagttgaacc agttgaaccg acgcaccttg
     1801 tacgggcagt tgttggagca gaagcgagtc ccgacacacc ggttgtagac catctcattg
     1861 agtccatcag gactgtgctc ggtcgcaccg accggacaga cgtactcgca gggagcctgc
     1921 tcgcagtgct ggcacagcat cggttgcgcg acgatctccg gat
//
LOCUS       DASRPQ010000929         2828 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3556170, whole genome shotgun sequence.
ACCESSION   DASRPQ010000929 DASRPQ010000000
VERSION     DASRPQ010000929.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2828
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3556170"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(71..823)
                     /locus_tag="VFD73_10540"
     CDS             complement(71..823)
                     /locus_tag="VFD73_10540"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI74442.1"
                     /translation="MIELRNVRKAFGKQVVLNGVDFEVREGETVALLGPSGTGKSVLL
                     KHIIGLIRPDEGEIYVDGKDVCRLKRKELSELRSRIGYVFQNGALFDSMDVFENVRLG
                     ITDEDKYGDLEYCRARVAECLRLVNLPADTIEKYPAQLSGGMRKRVGIARAIAGNPKY
                     LLYDEPTSGLDPVNADIIDGLVQRLDNELGVTSVMVTHDVRGAFRVADRLALLSEGKI
                     VMQGTPQEFLDSKNPKVREFLERDFDNPSFAA"
     gene            complement(820..1593)
                     /locus_tag="VFD73_10545"
     CDS             complement(820..1593)
                     /locus_tag="VFD73_10545"
                     /inference="COORDINATES: protein motif:HMM:NF014460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI74443.1"
                     /translation="MNPFARLGRLVLEGASHVGRLTYFVIEAIRGLGEVRIWWPRMMV
                     EAWNIGAGSLFIVLLISAFAGAVTALQTGYQFTGSIPYYVVGTLVVSSIILELGPVLT
                     ALILAGRIGARYAAELGTMRVTEQIDALESLGRSPASHLVIPRVLAGLLMIPALTVLA
                     NLSGILSGWISVKAVLPVTDADFIYGAQYYWRPWDAWYSVIKAFFFAGSITVISCYMG
                     FNTQQGAEGVGRSTTTAVVTSSVLILVLDTVLTRLLLNQ"
     gene            1713..2420
                     /locus_tag="VFD73_10550"
     CDS             1713..2420
                     /locus_tag="VFD73_10550"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000701 - purine-specific mismatch base
                     pair DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HZI74444.1"
                     /translation="MRTSNPLAHAPAFRRALLRWFRRHGRDLPWRKTRDPYRVLVSEF
                     MLQQTQVARVEAYYHRFLELFPSIDALATASAIQVRESWQGLGYYRRAEHLHRLARVV
                     VQDYSGVIPSEPTALLRLPGVGPYTAGAVASFAYERPAPAVDTNVARVLRRAFHPNLS
                     AAVAGRRVWATAARILPPRGKTAWAFNQAVMELGALVCTARQARCHCCPVRRACRTGS
                     RRTGPVGSMLVKRREGQ"
     gene            complement(2436..>2828)
                     /locus_tag="VFD73_10555"
     CDS             complement(2436..>2828)
                     /locus_tag="VFD73_10555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74445.1"
                     /translation="IASMIVGIAAKREDRSGLGAVVRAQSKLTRIAIAPGALLTVLSG
                     LILTFQLSGGDLAGFSIWLVIMQGAGVIAALITLLIALPTAARLGRLDPTGEAARYFD
                     ELRQRQRVVASISGTLGLVALFAGAMLT"
BASE COUNT          561 a          916 c          857 g          494 t
ORIGIN      
        1 acaccagaat ggcaatggtg acgatggcgc cgacgatcac ttcccgggaa tagcgaagat
       61 ccatggagtc ctacgcagca aacgaagggt tatcgaaatc gcgctcgagg aactcgcgga
      121 cctttggatt cttggaatcc aggaactcct gaggggtacc ctgcatgacg atctttccct
      181 cgctcaggag cgccagccgg tccgccaccc ggaatgcgcc acgcacgtcg tgggtgacca
      241 tgacgctggt gacccccagt tcgttgtcca atcgctggac cagcccatcg atgatgtcgg
      301 cgttcaccgg atccagaccc gaggtcggct catcgtagag gagatacttc gggttgccgg
      361 caattgctcg ggcgatgccg acccgtttcc gcatgccgcc ggaaagctgc gccggatact
      421 tctcgattgt gtctgccggg agattgacca gtcgcagaca ttcggcaact cgcgctcggc
      481 agtactccag atcgccgtac ttatcctcgt cggtgattcc cagccgtacg ttctcgaaca
      541 cgtccatcga gtcgaacagc gcgccgttct ggaagacata gccgatccgg gagcgcaact
      601 cggacaactc cttccgtttc agccggcaga catccttacc gtcgacgtag atctcccctt
      661 catccgggcg tatcaggccg atgatgtgct tcagcaggac gctctttccg gtgcccgagg
      721 gacccaggag cgccaccgtc tcgccttcgc ggacctcgaa gtccacgcca ttcagcacca
      781 cttgcttgcc gaaagcctta cggacgttgc ggagctcgat cattgattca gcagcagacg
      841 agtgaggact gtgtcaagca ccagaatgag gaccgagctg gtgactactg cggtggtggt
      901 agaccggccc accccctccg caccctgctg ggtattgaac cccatgtagc acgagatcac
      961 ggtaatcgaa ccggcgaaga agaacgcttt aatcaccgag taccaggcat cccaggggcg
     1021 ccagtagtac tgagccccgt agatgaaatc cgcgtcggtc accggaagca ccgctttgac
     1081 cgaaatccat ccggaaagaa ttccggacag gttggcgaga acggtgagcg ccggaatcat
     1141 gagcagaccc gcgagcaccc gtgggatcac caggtgtgag gcgggggagc ggcccaggct
     1201 ttccagcgca tcgatctgct cggtgactcg catggtcccc agctccgcgg cgtagcgggc
     1261 gccgattcgc ccggccagga tcagcgccgt cagtaccggc cccaactcga gaatgatgga
     1321 cgagaccacc agggtcccaa ccacatagta gggaatgctg ccggtgaact gatagccggt
     1381 ttgcagtgca gtgaccgcac cggcgaacgc ggagatcagc aggacgatga acaggctgcc
     1441 cgcgccgatg ttccacgcct ctaccatcat ccgcggccac cagatgcgca cctctcccaa
     1501 cccccggatc gcctcgatga cgaagtacgt cagccgtccg acgtgggaag cgccctccag
     1561 caccaagcga ccaagcctgg cgaacggatt catcgctgaa ctgtggatcc ggagttgaac
     1621 gtcaggagaa ccccattcgc taagagacct ggaaccggcg atcaaagcta accgggttgc
     1681 gcaactgccg tgagacgata tctctcacgc tcatgcgcac cagcaaccct ctggcgcacg
     1741 cgcctgcgtt ccgccgcgcc ctcctgcgct ggttccgtcg acatggacga gacctgccgt
     1801 ggcggaagac ccgagatccg taccgggttt tggtatccga gttcatgctg caacagaccc
     1861 aggtggccag ggtcgaagcc tattaccacc gcttcctcga gctctttccc agcatcgatg
     1921 cgcttgccac agcctctgcc attcaggtgc gggaatcctg gcaagggctg gggtattatc
     1981 gccgggccga gcatctgcac cgtctggccc gagtggtcgt gcaggattac tcgggtgtta
     2041 ttccttcgga gccgactgcc ttgctgcgcc tgcccggtgt gggaccctat accgccggcg
     2101 cggtggccag ctttgcctac gagcggcccg ctccagcagt ggacaccaac gtagcccgag
     2161 tccttcggcg cgcctttcac ccgaaccttt ccgccgcggt cgccgggcgc cgggtctggg
     2221 ccaccgcggc acgcatcctt cctccgcggg gaaagacggc gtgggccttc aatcaggcag
     2281 tcatggagtt gggagcactg gtgtgcaccg cgcggcaggc tcggtgtcac tgctgcccgg
     2341 ttcgacgtgc ctgccgcact gggagccgcc ggacgggacc ggtcgggagc atgctggtca
     2401 agagaagaga aggacagtag cgactggtac ccgcgctatg tcagcatggc accggcgaac
     2461 agggccacca gtcccagggt acccgaaatc gatgcgacga cgcgctgccg ttggcgcagc
     2521 tcgtcgaagt aacgcgctgc ttccccggtt gggtcgagac ggccaaggcg cgccgctgtg
     2581 ggcagcgcga tcaatagcgt aatcagcgca gcaatgacgc cggctccctg catgattacc
     2641 aaccagatgc tgaacccagc caggtcaccg ccgctgagct gaaaggtcag gatcaaacca
     2701 gagaggaccg tgaggagcgc gccgggggca atggcgatcc gggtgagctt cgactgtgcc
     2761 cgcacgaccg cgcccaaccc cgagcggtct tctcgcttgg ctgcgatgcc cacaatcatc
     2821 gatgcgat
//
LOCUS       DASRPQ010000930         1831 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2930719, whole genome shotgun sequence.
ACCESSION   DASRPQ010000930 DASRPQ010000000
VERSION     DASRPQ010000930.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2930719"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..>1831
                     /locus_tag="VFD73_10560"
     CDS             59..>1831
                     /locus_tag="VFD73_10560"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HZI74446.1"
                     /translation="MNTSGSERVIADAPSRLQEAMAERYPIERPLGRGGMATVYLACD
                     VKHQRQVAVKVLHPELAAGLGTERFLREIRIEAGLQHPHILPLHDSGEADGFLYYVMP
                     YVAGESLRDRLTREGRLSLEDTVRLGGDVADALHYAHERGVVHRDIKPENILLSGGHA
                     LVADFGIAKAVEAAGDAKLTETGWGMGTPAYMSPEQILGDMVDARSDVYGLACVLYEM
                     LAGHPPFPAVTARAVFTRHHLDVPDPIRGERPDVPEHVEKALLTALAKQPGDRFASTS
                     ELLEAMRRPGTDPSPTVPSVVSSKRDSVWLNALRSAPLVVPTAATLLIAGGFFLAYKT
                     GHLGGAPAAGTSVAVLPIRDLGGDTTQAYLSEGITDELSSDLAQIKGLRVINRSTMRI
                     YGKSGKSPTAIGNELGVDGVVSGTLQRFGDTIQVRTQLTSIRNPRALWTQSYRGSDSD
                     LLRFQRDIAAEVSGKLIGGHPSVTAAQTRTADPNAIDAYIRGRYWWNKRGQANLLRAI
                     QFFSQALDADPTFAPAYSGTADAYVQLGYASYLAPSDAFPKAEAAARKALELDSTLAE
                     PHATLGFVKMYYAWDWPEADREFRI"
BASE COUNT          338 a          570 c          594 g          329 t
ORIGIN      
        1 gcgagatcaa aatctgggaa tcgccgttga gcggctggcc cccacccaat aggtcccggt
       61 gaacaccagc ggatccgagc gagtgattgc tgacgcgccc tcccggctgc aggaggcaat
      121 ggccgagcgc taccccatcg agcggccgct ggggcggggc ggaatggcca ccgtctacct
      181 ggcctgtgac gtcaagcacc agcgacaggt cgcggtcaag gtgcttcacc cggaactggc
      241 cgcgggtctc ggcaccgagc ggtttctccg ggagatccga atcgaagccg ggttgcagca
      301 tccccacatc cttccgctgc atgactcggg cgaagcggac ggcttcttgt attacgtgat
      361 gccgtacgtc gccggtgagt ctctgcgaga tcggcttact cgcgaggggc ggctgtcgct
      421 agaggacaca gttcgactgg gcggagatgt cgccgacgcg ttgcactatg cccacgagcg
      481 aggggtagtg caccgggata tcaagccgga gaacatcctg ctctccggcg gtcatgcgct
      541 ggtggcggat tttgggatcg ccaaggccgt cgaggcggcc ggcgacgcga agttgaccga
      601 gacgggctgg ggcatgggca caccggcgta catgagcccg gagcaaatcc tcggtgatat
      661 ggtggatgcc cgcagcgatg tgtacggcct cgcctgcgtg ttgtacgaga tgctggccgg
      721 tcacccaccc ttccccgcgg taactgcgcg ggccgtgttc actcgccatc atctggatgt
      781 tcccgacccg attcggggag agcggccgga tgtgccggaa catgtcgaga aggcgcttct
      841 caccgcattg gcaaagcagc cgggcgaccg cttcgctagc acgagcgagt tgctcgaggc
      901 catgcgccgg cccggtacgg accctagtcc gaccgttcca tccgtcgtgt cttcgaaaag
      961 agactcggtt tggctcaacg cactgcgctc agcgccgctg gtggtgccaa ctgcagccac
     1021 cctgctgatt gcggggggct ttttcctggc gtacaagacc gggcacctcg gcggtgcacc
     1081 cgctgcgggt acttcggttg ctgtactccc gattcgggac ctcggtggcg acaccactca
     1141 ggcctatctc tccgagggca tcaccgatga gttgagctcc gatctggcgc agatcaaggg
     1201 ccttcgggtc atcaatcgct caaccatgcg gatctatgga aagagcggta agtcaccgac
     1261 ggcgattggg aacgagctag gggtcgacgg cgtcgtcagc ggcactctgc aacggttcgg
     1321 cgatacgata caagtccgta cccagttgac ctcgattcgt aaccctcgag cgctgtggac
     1381 gcagagctat cgtgggagcg acagcgatct gttgcggttc cagcgggaca tcgcggcaga
     1441 ggtcagcggg aaactcatcg gtggacatcc ctcggtaacg gcagcccaga cacggaccgc
     1501 cgatcccaac gcgatcgatg cttacatccg tggccgctac tggtggaaca agagggggca
     1561 ggccaacctc ctccgggcca ttcagttctt cagtcaggca ctggatgccg atcccacctt
     1621 tgctccagcc tactccggca cggcagacgc ctacgtacag ctcggttatg ccagctacct
     1681 tgcgccgagc gacgcatttc ccaaggccga agcagcggca cgaaaggcac tggagctgga
     1741 ctcgacgctg gccgagccgc acgcgacact cggattcgtg aagatgtact atgcctggga
     1801 ctggcccgag gccgatcgtg aattccggat c
//
LOCUS       DASRPQ010000931         1234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_111306, whole genome shotgun sequence.
ACCESSION   DASRPQ010000931 DASRPQ010000000
VERSION     DASRPQ010000931.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1234
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111306"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1216)
                     /locus_tag="VFD73_10565"
     CDS             complement(<1..1216)
                     /locus_tag="VFD73_10565"
                     /inference="COORDINATES: protein motif:HMM:NF022100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NEW3 domain-containing protein"
                     /protein_id="HZI74447.1"
                     /translation="MAHLNAAAGYLSRVIFDALVDDDRVVAGQSLNWMLSTWNASADP
                     HQAQISAAQCLTFQACRSPGITVTHRIEPGQVETDTVRFGVLDEQPITTPYFLRAPRN
                     GDMYVWPQQTRNALLAPLPYGDPFEAPEFQASAELTNPGSDSVEAGFWNEAAFRTNDQ
                     ARGEVRRPVTVVPRVDVKLDPSNELWPLTSGVPHRFTVTLTHGARDSTMGTITLQVPR
                     GWPAVAPQRFQFGHEDERETFAFDLKPPARLRPGSFEIKAVARDLGGTAYDVGVYSVD
                     YPHIHPRTYPKPATTSLRVASLLLPHLARVGYIRGAADRVPEALTSIGVPLTLLGPAA
                     LEQGDLNRYDAIIVGPRAYEVDSALVENNRRLLEYARRGGLVIVQYQQQAYFNGGFAP
                     YPLQVGGPSPRGV"
BASE COUNT          247 a          377 c          387 g          223 t
ORIGIN      
        1 cgactcccct tggcgatggc cctcccacct gcagtgggta cggagcaaag ccgccgttga
       61 agtaggcctg ctgctggtac tgtacgatga cgagaccgcc acgccgggcg tactccaaca
      121 ggcggcgatt gttctcgacc agagcggaat cgacctcgta cgcgcggggt ccgacgatta
      181 tagcgtcgta gcggttcaga tcaccttgtt ccagcgccgc ggggccgagc aacgtgagag
      241 gaacgccgat gctggtcagg gcctcgggaa cccggtcggc ggccccgcgg atgtacccca
      301 cccgcgcaag atggggcaac agcagcgacg cgacccgcaa actggttgta gccggcttag
      361 ggtaggttcg aggatgaatg tggggatagt cgacgctata caccccgaca tcgtatgctg
      421 tcccgccaag atctctggcc actgctttga tctcgaaact ccccgggcga agcctggccg
      481 gtggcttgag gtcgaaggca aaggtctctc gttcatcctc atgcccgaat tgaaaacgct
      541 ggggggccac cgcgggccaa ccacggggaa cctgcagcgt tatcgtcccc atcgtcgaat
      601 cccgggcccc atgagtgagc gtcacggtaa agcggtgcgg cacgccggag gtgagcggcc
      661 agagctcgtt ggaagggtcg agctttacat ccactctcgg cacgactgtc accggccgtc
      721 ggacctcacc tcgcgcctgg tcattggttc gaaacgccgc ctcgttccag aaccccgcct
      781 ctacactgtc ggacccagga ttggtcagct cagcggaggc ctggaactct ggagcttcga
      841 aaggatctcc gtaggggagc ggagccaaaa gagcattgcg ggtttgctgc ggccagacgt
      901 acatgtcgcc gttgcgcgga gctcggagaa aatagggagt cgtgatcggc tgctcatcca
      961 gtaccccgaa ccgcaccgta tcggtctcaa cctggcctgg ctcgattcgg tgagtgacag
     1021 tgatgcctgg cgaacggcac gcctgaaagg tcagacattg ggcagcggag atctgggcct
     1081 ggtgcggatc ggcagatgcg ttccaggtag acagcatcca attcagtgac tgtcctgcga
     1141 ccacacggtc atcatcgacc agagcatcga atatcacgcg actcagatag cccgcggcgg
     1201 cattcaaatg cgccatctga tcgctcactt cgat
//
LOCUS       DASRPQ010000932         1526 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3874877, whole genome shotgun sequence.
ACCESSION   DASRPQ010000932 DASRPQ010000000
VERSION     DASRPQ010000932.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1526
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3874877"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..298)
                     /locus_tag="VFD73_10570"
     CDS             complement(<1..298)
                     /locus_tag="VFD73_10570"
                     /inference="COORDINATES: protein motif:HMM:NF036854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74448.1"
                     /translation="MSSIVTTVAAAPLSVQPSVRAEQCNQLVLGETAAIVRREGEWLS
                     ICTHRDDYAGWIHSGYVRVIEDSEAASWRADATAWSEGAVVRAAQWQVHLPLLAR"
     gene            complement(490..>1526)
                     /locus_tag="VFD73_10575"
     CDS             complement(490..>1526)
                     /locus_tag="VFD73_10575"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HZI74449.1"
                     /translation="MEHLAAATARVADKARLRRINEALLTQSAPGHGLDSLGASSGMQ
                     DFAHQVALLAQSERTTVLLNGESGTGKGWVARMIHDLSPRAKAPFVEVNCAGLNATFL
                     DSELFGHEKGAFTDAKDRKQGLFEIADHGTIFLDEIGDLAPELQPKLLKVLETKTFRR
                     LGGTREITVDVRLVAATNKNLQLEVEGGSFREDLYYRLSVMPLTLPAVRDRSREDRLA
                     LITRLMGDLQAELPDGPAALSGEVLERLLSYPWPGNVREMRNVLERALILGRGQPTVS
                     VEHLPGEFRARPGVGDRRHTPLSLEDLERQHIERTLKHHTGNRTRAAIELGISRATLI
                     NKIKRYNIPA"
BASE COUNT          271 a          495 c          481 g          279 t
ORIGIN      
        1 cccgggcgag cagcgggagg tgaacctgcc actgagcggc ccgaactact gcgccctcac
       61 tccaggcggt agcatcggcg cgccacgagg ctgcttcgga atcctcgatc accctcacgt
      121 atcccgagtg gatccatccg gcatagtcgt cccgatgggt gcagatggag agccactcac
      181 cttcccgcct cacgattgcc gcagtctcgc ccagaacgag ctggttgcac tgctccgcgc
      241 gaaccgacgg ctgaaccgag agcggcgctg ctgcgacggt agtcacgatc gaggacatag
      301 tatcagctac ttggctgaga aggggctttg ctctggcagt cacgacacag cgttacccca
      361 cgaaagttgc agatcagaca gatgaatgtg ccgcagccgg cgcagggata gccctccgac
      421 gcgcgctctt cccggccgca ggcgcggcag gtcatggcat catgttcgtg gagttcagcc
      481 atccgatact caggcgggaa tattgtagcg cttgatcttg ttgatcagcg tggcgcgcga
      541 tatcccgagc tcgatggcgg cccgggttcg gtttccggtg tgatgtttca gggtacgctc
      601 gatgtgctgg cgctcgagat cttccaggct gaggggagtg tgccgccgat cgccgactcc
      661 gggtcgggcc cggaactctc ccggcaggtg ctccacactg acggtgggct ggccccggcc
      721 gagaatcagc gcccgctcca ggacgttccg catctcgcga acgtttccgg gccagggata
      781 actgagcagc cgctcgagca cctctccgga gagcgccgct ggcccgtcag gcagctccgc
      841 ctgcaggtcc cccatcagcc gagtaatgag agcgagccgg tcttccctcg agcgatcgcg
      901 gacggccggc agggtgagcg gcatgacgct cagacgataa tagagatcct cccgaaaact
      961 cccgccctcc acttccagct gaagattctt gttggtggcg gcaacgagcc gaacgtcaac
     1021 cgtaatttcc cgggtccctc ccagccggcg gaacgtcttg gtctcgagca ctttcaacag
     1081 cttgggctgg agctcggggg cgagatcgcc gatttcatcg aggaagatgg ttccatgatc
     1141 cgcgatctcg aacaacccct gttttcggtc cttggcatcc gtgaaggcgc ccttctcgtg
     1201 gccaaagagc tccgagtcca gaaaggtggc gttgaggccg gcgcagttca cctccacaaa
     1261 tggagccttg gcccgggggc tcaggtcgtg gatcatgcgc gccacccagc ctttgccggt
     1321 accgctctcc ccgttcagga gaacggtggt tcgctcgctc tgcgccagca gcgctacctg
     1381 gtgggcaaag tcctgcatcc cggaggacgc gccgagggaa tccaacccgt gccctggcgc
     1441 gctctgagtg agaagcgcct cattaatgcg ccggagccga gccttatccg cgacgcgggc
     1501 agtggcagcc gccaggtgct ccatgt
//
LOCUS       DASRPQ010000933         1561 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3874966, whole genome shotgun sequence.
ACCESSION   DASRPQ010000933 DASRPQ010000000
VERSION     DASRPQ010000933.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3874966"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            306..644
                     /locus_tag="VFD73_10580"
     CDS             306..644
                     /locus_tag="VFD73_10580"
                     /inference="COORDINATES: protein motif:HMM:NF023202.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lsr2 family protein"
                     /protein_id="HZI74450.1"
                     /translation="MAQKTVVTVVCDLPHDGEVEGTETVSFAFDGSSYEIDVCATHAK
                     DLREKFDKYTEHARRVAGGGGGRRRRSRSGPGRERSSEIRAWAKQRGHKVSERGRIPA
                     AIIAEYESSH"
     gene            1033..>1561
                     /locus_tag="VFD73_10585"
     CDS             1033..>1561
                     /locus_tag="VFD73_10585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003419511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
                     /protein_id="HZI74451.1"
                     /translation="MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGV
                     AAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNY
                     IGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVIQLLSGYQGKEPATAGGQSEAT
                     PSSSLVLDQFGRSLTQ"
BASE COUNT          286 a          478 c          520 g          277 t
ORIGIN      
        1 aggacagcac ttcgaatgcc gatccaggtg acgcaacgca tggcccatcc acggaccagc
       61 gtaaggtata ggccgcatca gccagaacag ccgataggtc ggatgccgag agaaggttct
      121 gctcgttcga tggcccttga tcatccgatt acggagagtt acaccaatcg cgcgccctgt
      181 ttcaagtggt tgctgtgatg agcaacttgc agtggccgat tttcttgacc tgaattgcta
      241 aacacaactg gcttggtata ttgtgcctca gcctattaac tgtccccagc agaagggctg
      301 gccccatggc acagaagacg gtggtgacgg tcgtgtgtga ccttccccac gacggtgagg
      361 ttgagggaac cgagacggtt tcgttcgcct ttgacggcag ctcctatgag atcgatgtat
      421 gcgccacgca tgccaaggat ctgcgtgaga agttcgacaa gtacacggag cacgcgcgtc
      481 gtgtcgctgg tggtggcggt ggccgtcgcc gtcggtcacg tagcggaccg ggccgcgagc
      541 gcagttcgga aattagggca tgggcgaagc agcgcggcca caaggtcagc gagcgcggcc
      601 gtattccggc ggcgatcatc gctgagtacg agtcttcaca ctgagttgac cggggcggcc
      661 cgcagacgga ctgcgggcgg gctcccagat cttgcgaccc cgccagtagt accgcatgcg
      721 ggcctcagcc ccgttctcgt tgccccgtgc ctcccctgcc cccttgacat cacgatcccc
      781 ggccgtaccg aaaccggccg gcgccccgcc acatctggcg ccatctcacc gccgccgcgg
      841 cgttcgcttc gggcgtagca gggaacagtc accttctcga ccgggttgga tggggatgaa
      901 cgccccctgc ctgggaacgt tctatgtgcg acttatcgtg cgcagcgtcg tctaggcatg
      961 gggttaccat gcggaaggac aggggccgga catcggggcc tcccccggcc gcttgtgtga
     1021 gggagcaacg agatgttcga gagattcacc gaccgggcgc ggcgggttgt ggtcttggcg
     1081 caagaagaag ccaggatgct caaccacaac tacatcggca ccgagcacat cctgctcggc
     1141 ctgatccacg agggtgaggg tgtcgcggcc aaggccctgg agtcgctggg gatcagcctg
     1201 gaggcggtgc ggcagcaggt cgaggagatc atcggccagg gccagcaggc cccgtcggga
     1261 cacatcccgt ttacgccgcg ggctaagaag gtgctggagc tgtcgctgcg ggaggcgttg
     1321 cagcttggcc acaactacat cggcactgag cacattctgc tgggcctgat ccgcgagggt
     1381 gagggcgtgg ccgcccaggt gctggtcaag ttgggcgccg acctgaacaa ggtccgccag
     1441 caggttatcc agctgctgtc cggctaccaa ggcaaggagc ccgccaccgc cgggggccag
     1501 tccgaggcga ccccgtcgtc ctccctggtg ctggaccagt tcgggcgcag cctcacgcag
     1561 g
//
LOCUS       DASRPQ010000934         1132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_111503, whole genome shotgun sequence.
ACCESSION   DASRPQ010000934 DASRPQ010000000
VERSION     DASRPQ010000934.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111503"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2..76
                     /locus_tag="VFD73_10590"
     tRNA            2..76
                     /locus_tag="VFD73_10590"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:36..38,aa:Ile,seq:cat)
     gene            146..219
                     /locus_tag="VFD73_10595"
     tRNA            146..219
                     /locus_tag="VFD73_10595"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:177..179,aa:Lys,seq:ttt)
     gene            222..295
                     /locus_tag="VFD73_10600"
     tRNA            222..295
                     /locus_tag="VFD73_10600"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:256..258,aa:Arg,seq:tct)
     gene            301..376
                     /locus_tag="VFD73_10605"
     tRNA            301..376
                     /locus_tag="VFD73_10605"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:334..336,aa:Glu,seq:ctc)
     gene            378..451
                     /locus_tag="VFD73_10610"
     tRNA            378..451
                     /locus_tag="VFD73_10610"
                     /product="tRNA-OTHER"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
     gene            454..526
                     /locus_tag="VFD73_10615"
     tRNA            454..526
                     /locus_tag="VFD73_10615"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:487..489,aa:Ile,seq:cat)
     gene            528..601
                     /locus_tag="VFD73_10620"
     tRNA            528..601
                     /locus_tag="VFD73_10620"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:562..564,aa:Asn,seq:gtt)
     gene            746..822
                     /locus_tag="VFD73_10625"
     tRNA            746..822
                     /locus_tag="VFD73_10625"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:780..782,aa:Asp,seq:gtc)
     gene            824..895
                     /locus_tag="VFD73_10630"
     tRNA            824..895
                     /locus_tag="VFD73_10630"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:856..858,aa:Val,seq:gac)
     gene            900..972
                     /locus_tag="VFD73_10635"
     tRNA            900..972
                     /locus_tag="VFD73_10635"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:933..935,aa:Arg,seq:gcg)
     gene            974..1048
                     /locus_tag="VFD73_10640"
     tRNA            974..1048
                     /locus_tag="VFD73_10640"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1009..1011,aa:Val,seq:cac)
     gene            1052..1124
                     /locus_tag="VFD73_10645"
     tRNA            1052..1124
                     /locus_tag="VFD73_10645"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1085..1087,aa:His,seq:gtg)
BASE COUNT          214 a          349 c          366 g          203 t
ORIGIN      
        1 tggcggcgta gctcaggtgg ttagagcacc tcgctcataa cgagaaggtc cgcaggttca
       61 agtcctgccg ccgctacgag ttccatccgc gggctactgg agttaaccat gaagatcaaa
      121 caggccgtcg agatacgcac ctgacgggcc gttagttaat ggcagaatcg tgcactttta
      181 atgcagcaga tcagggttcg accccctggc ggcccaccag agcctctgta gctcaattgg
      241 acagagcaca cgccttctaa gcgtggcagt gcgagttcga ctctcgccag aggcgcgcaa
      301 gccccgttgg agtagtggtg atctcgcctc atcctcagtg aggagaaggc cggttcgatc
      361 ccggcacggg gtaccacgcc gctgtcaccc tgatggtacg ggtagccggt ccttcaatcg
      421 gtcttcgcgg gttcgattcc cgttggcggt actgcgggta ggagcaccgg tcgtgctcaa
      481 ctggctcata accagagata gctgggttcg actcccaggc ccgccagtct ccggtagctc
      541 aatttggcag agcagctccc cgttaaggag aggcgtctag gttcgagtcc tagtcggaga
      601 gcaaacctgc gggatggctc ccgtagttcc ggtgggcaga catgggacgg cctaagccag
      661 ccgtcggccg cggggcggca gcactatgac gcgctcggct cggcgcagga agtacacgcc
      721 ccacggccgc cgcgaccgga ctcaaggtgg cttagctcaa ttggtcagag caccggcttg
      781 tcacgccggg ggtcgcgagt tcgagtctcg tagtcaccgc catgcccggt tagctcagcg
      841 ggagagcatc cgctcgacag gcggaaggcc ggaggttcaa cacctccacc gggcaccgag
      901 cccctgtagc ccaacggata gggcgtctga tcgcgaatca ggcaggtgca ggttcgaatc
      961 ctgccagggg tgccgatcag tagctcagcc aggccagagc gccggtccca cacaccggat
     1021 gccgcaggtt cgaatcctgc ctgatcgact ggtgcctttt gccgtcgcgg gaaggcgcgg
     1081 gcctgtggag cccgcaaagg ccggttcgac tccggcaagg cacccatccg tg
//
LOCUS       DASRPQ010000935         2795 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2931003, whole genome shotgun sequence.
ACCESSION   DASRPQ010000935 DASRPQ010000000
VERSION     DASRPQ010000935.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2795
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2931003"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1055)
                     /locus_tag="VFD73_10650"
     CDS             complement(<1..1055)
                     /locus_tag="VFD73_10650"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: protein motif:HMM:NF013279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008955 - peptidoglycan
                     glycosyltransferase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HZI74452.1"
                     /translation="MRSPSIDRQLVTVSVGLVLFGLATLYSAGQTDVPTRAAGVWYHQ
                     FIWFGLGIVAAAIIFHVSLRVLEWLSPALYAFSVLLLGVVLLVGTGAGTAEGSHSWIS
                     IGGHQIGQPSELAKVATVLMLARYLSSRKEPPRSLRDLVGPVLIVGVPCLMVLKQPDL
                     GSALVFIGIFFAMVFWAGVRPRMLFLLATPVISLLLAFNTVAWSVWIILFVLVLIAWR
                     PYVWDWVVFLTANLVMGAIAMPLWHRLAPYQQNRLLTFINPEADPRAAGYHAIQSRVA
                     IGSGGWFGTGYTQGPQKRLAFLPEQHTDFVFSVVGEELGFVGVLIALVLFLSLFLVLL
                     RVARRATDSFSSLAVFG"
     gene            complement(1052..>2795)
                     /gene="mrdA"
                     /locus_tag="VFD73_10655"
     CDS             complement(1052..>2795)
                     /gene="mrdA"
                     /locus_tag="VFD73_10655"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR03423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HZI74453.1"
                     /translation="TNRLRPISLTPPRGSILDRNGRVIAENVPGFSVKLLATSVDSLR
                     AVLARVGRYVPLDPAQISDIIDRYLQARYQPALVFGDASFDIIAKLEEHRAALPGLVI
                     QAEPKRQYPAGKSVAHIVGYVSEVNEADLAADRYPGAVLGSIVGKAGLEREYDDTLRG
                     AEGVRYIEVNARGRLVREGAPSAGLSPTPGKPIVTTLDLDLQRFIDSIWPANIRGAMV
                     AMTPAGEIRALYSAPTFDPNHFVGGISSAEWRKLNNDPAKPLLNRVIQARYPPASPFK
                     LAIAAMALKRGLINLNTRMPEPCRGGMRLGNRVFRCWKREGHGSLDLTGAVAASCDVY
                     FYQLGLKLGLDAIIQDGLLMGFRDKSGIDLENELNPIYPSSSAYFDKLYGPRNWSPPG
                     TTLNFSIGQGENTQTLINMMRFYEGLAGNGESITPYIVKPTSGRKRDLGLNDRQLDGL
                     RRALIAVVERGTAAANRRADLAVAGKTGTAQNPHGEDHGWFIGFAPAEKPELIVGGIM
                     EFAKHGTVVAPYVIQALRRYILGPDATGPVKVGVLQDESVNPQDNAPHPIQLDSDSVA
                     APSAADSANGATGP"
BASE COUNT          552 a          871 c          902 g          470 t
ORIGIN      
        1 attccgaaca cggccagact gctgaatgaa tcggtggcac gacgggccac ccgaagcaat
       61 acgaggaaaa gcgacaggaa caaaaccaat gcgatcagca ctccgacgaa tccgagctct
      121 tcgcccacca ccgagaacac gaaatcggtg tgctgttccg gcagaaaggc cagccgtttc
      181 tgggggccct gggtgtagcc ggtgccgaac cagcctcccg atccgattgc cactcgcgac
      241 tggatcgcgt gataccctgc cgcgcgcggg tccgcctcag gattgatgaa cgtgagaagg
      301 cggttctgct ggtaaggcgc cagccggtgc cagagtggca tggcgatggc tcccatgacc
      361 aggttggcag tgaggaagac cacccagtcc cagacgtacg gccgccaggc gatcagcacc
      421 agcacgaaga ggatgatcca cacactccag gccaccgtat tgaaggcgag caggaggctg
      481 atcaccgggg tcgccagcag aaagagcatg cgcggccgta cgccggccca gaacaccatg
      541 gcaaagaaga ttccgatgaa cacgagagcg ctgccgagat ccggttgctt gagcaccatc
      601 agacaaggca ccccgacgat caacaccggg ccgaccagat ctcggagtga gcgcggcggc
      661 tcttttctgc tggagagata gcgggccagc atcaacaccg tcgccacctt ggccagctcg
      721 gatggctggc cgatctgatg tcccccgatc gagatccagc tgtgactccc ttcggccgtg
      781 cccgctccgg tgccgaccag cagcaccacg ccaagcagca gcacactgaa cgcgtacagc
      841 gcgggggaga gccactccag cacccggagt gaaacgtgaa aaatgattgc cgcggccacg
      901 atgccgagtc cgaaccagat gaactggtga taccatacgc ccgcggcccg ggtgggcacg
      961 tcggtctgcc ccgccgagta cagcgtggcc agcccgaaca gcaccaagcc aacgctgacg
     1021 gtgaccagct ggcgatcgat gctgggcgat ctcacggacc ggtggcccca ttcgcagagt
     1081 cggccgccga cggtgccgcc acggaatcag agtcgagctg gatcgggtgg ggtgcgttgt
     1141 cctgcgggtt caccgattca tcctgtagca cgccgacctt gaccggtcct gtggcgtcag
     1201 ggccgaggat gtagcgccgg agcgcttgga tgacgtaagg cgctaccacc gtcccatgtt
     1261 tggcaaactc catgatgcca cccacgatca gctccggttt ttccgccgga gcaaacccaa
     1321 tgaaccagcc gtgatcttcg ccatgagggt tttgggcggt gccagtcttt cccgccactg
     1381 ccagatcggc ccggcgattg gcagcggcag tgccccgctc caccacggcg atcagtgccc
     1441 ggcgtagacc atcgagctgc cggtcattca acccgaggtc ccgcttccgg cccgacgtag
     1501 gctttacgat gtacggcgtg atgctctcgc cattgccggc cagcccctca tagaatcgca
     1561 tcatgttgat gagcgtctgg gtgttctcgc cctgcccgat ggaaaagttc agggtggtac
     1621 ccggagggct ccagttgcga ggaccgtaca gcttgtcaaa gtaggcggag gacgatggat
     1681 agatcgggtt cagctcgttc tccagatcaa ttccgctctt gtcccggaag cccatcagca
     1741 gaccatcctg aatgatggca tccagtccga gcttgaggcc gagctgatag aagtagacgt
     1801 cgcaactggc ggccacagcg ccggtgaggt cgagcgagcc gtgaccctcc cgtttccagc
     1861 agcggaagac ccgattaccc aagcgcatgc cgccgcggca tggctccggc attctggtgt
     1921 tgagattgat cagcccccgc ttcagcgcca tcgcggcaat ggcgagcttg aagggagagg
     1981 cgggcgggta gcgggcctgg ataacccggt tgagcagtgg cttcgccgga tcgttgttca
     2041 gcttccgcca ttcggcggag gagatcccgc cgacgaaatg gttggggtcg aacgtcgggg
     2101 ctgaatagag cgcccggatc tctccagccg gggtcattgc taccattgca ccgcggatgt
     2161 tcgccggcca gatgctgtcg atgaatcgct ggaggtcgag atcgagggtg gtgacgatgg
     2221 gtttccctgg agtcggcgat aggccggcag acggcgcgcc ttcccgcacc agccggcccc
     2281 gggcgttgac ttcgatgtag cggactcctt cggcgccccg aagggtgtca tcgtactcgc
     2341 gttccaggcc ggccttgccc acgatcgagc cgagcaccgc cccggggtag cggtcggctg
     2401 ccagatcggc ttcgttgacc tcggagacgt agccaacgat gtgggcgacc gacttccctg
     2461 ccggatactg ccgcttcggt tccgcctgga tcaccagccc ggggagtgcg gcgcgatgct
     2521 cctccagctt ggcaatgatg tcgaaggacg catcaccgaa aaccagggcg ggctgatagc
     2581 gagcctgcag atagcggtcg atgatgtcgg aaatctgcgc cgggtcgagc ggaacgtatc
     2641 gacccacccg cgcgaggacg gcgcgaaggg aatccaccga ggttgcgagg agcttgaccg
     2701 aaaatcctgg tacgttctcc gcgatgacgc ggccgttccg gtcgagaatg ctgccgcgcg
     2761 gtggagtcag cgagatggga cgaagccggt tggtt
//
LOCUS       DASRPQ010000936         1307 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4183266, whole genome shotgun sequence.
ACCESSION   DASRPQ010000936 DASRPQ010000000
VERSION     DASRPQ010000936.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1307
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4183266"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..409)
                     /locus_tag="VFD73_10660"
     CDS             complement(<1..409)
                     /locus_tag="VFD73_10660"
                     /inference="COORDINATES: protein motif:HMM:NF013499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HZI74454.1"
                     /translation="MRKIFVKEIKDRTPVDSIFLVKEKITAMAKNGKPYLNLRLMDKS
                     GEVEAKVWDNVDTLAATFDKDDFIAVRSKASVYLGKMQLVIAELRRVPEGDVALADFL
                     PETERDIREMEAELASLVASFTDANLHRLLASFF"
     gene            complement(484..>1307)
                     /locus_tag="VFD73_10665"
     CDS             complement(484..>1307)
                     /locus_tag="VFD73_10665"
                     /inference="COORDINATES: protein motif:HMM:NF044849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74455.1"
                     /translation="LAPGHSARDTYAMLERRGIGLERKPFAVGVRVEHPQELINRIQY
                     GLPGHPQLPPADYALAWNDSRTGRSAYSFCMCPGGVVVAGSSEEGGVVTNGMSDYRRS
                     SPYANSALVVTVGKDDFPGESPLAGVEFQRSLEREAFTAGGGDYRAPAQNLLAFLGEK
                     GGYRIASTYRPGVREADLSLLFPGYVTETLRAGIRSFDRKMRGFVSAEATMTGVETRT
                     SAPVRIVRGEVLQSPALRGMYPVGEGAGYAGGIMSAALDGIRVADAIAGSLAAGG"
BASE COUNT          250 a          437 c          378 g          242 t
ORIGIN      
        1 caaaaaagga agccagcagc ctgtgcaggt ttgcatcggt gaacgaggcc acaagcgagg
       61 caagctccgc ttccatctcc cggatatcac gctcggtctc gggaagaaaa tcggccaggg
      121 caacatcccc ttccggcacc cgcctcagtt cggcgatgac cagctgcatc ttgccgagat
      181 agaccgaggc cttggagcgg accgcgatga aatcgtcctt gtcgaaggtc gccgccagcg
      241 tatccacatt gtcccagact ttcgcctcga cctcaccgct cttgtccatg aggcgcaggt
      301 tcagataggg tttgccgttc ttggccattg ccgtaatctt ctcctttacg agaaagatcg
      361 aatcgaccgg ggtgcgatcc ttgatttcct tgacgaatat ttttcgcaaa ttccgctcct
      421 tgaaataagt cctggcaaat ggttgatggc caagggtgca atcgggcggc tagccgctag
      481 ctgctaacca ccagctgcca gcgacccggc aatggcgtcc gctacccgga tgccgtccag
      541 ggcggcactc atgattccgc ctgcgtaacc ggcaccctct ccgaccgggt acatcccccg
      601 caaggcgggc gactgcagga cttcccccct gacgatgcgg accggcgccg acgtcctggt
      661 ctccacgccg gtcatggtcg cttcggcgga aacaaaaccg cgcattttcc ggtcgaagct
      721 gcggattccc gcccgcagag tttcggtcac atagccggga aacagcaggg agaggtcggc
      781 ttcccgcact cccggccggt aggtggaggc gatccggtac cccccctttt cccccagaaa
      841 ggccaagagg ttctgcgccg gcgcccggta atcaccaccg ccggctgtga acgcctctcg
      901 ttccagcgac cgctggaatt cgacgccggc cagcggcgat tctccgggaa agtcgtcttt
      961 ccccacggtc acgaccaggg cgctgttggc atagggggag ctgcggcggt aatcactcat
     1021 gccgttggtc accacccccc cttcttcaga gcttcccgcc accaccacac cgccggggca
     1081 catgcagaag gaatacgctg agcggccggt acggctgtca ttccaggcaa gtgcatagtc
     1141 cgccggcggc agctgcggat gaccgggaag cccatactgg atccggttga tcagctcctg
     1201 gggatgttcg acgcggaccc ccaccgcaaa aggcttccgt tccagcccga tgccccggcg
     1261 ctccagcatg gcgtatgtat cacgggcgct gtgcccggga gcaagca
//
LOCUS       DASRPQ010000937         3012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2629371, whole genome shotgun sequence.
ACCESSION   DASRPQ010000937 DASRPQ010000000
VERSION     DASRPQ010000937.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3012
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2629371"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(12..1265)
                     /locus_tag="VFD73_10670"
     CDS             complement(12..1265)
                     /locus_tag="VFD73_10670"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74456.1"
                     /translation="MRSVLFVDPPAFCTTLEGLVAPALRSRPLAVAPPTADRATLLAL
                     SSEARRAGLTRGMPVRTAQRVCPDLILLPPNPRLYARASRALHEILRVFAPTIEPRGY
                     GHAFLDLTGTGRLFGCPQDVAARIRREALERLRLPLSVGIASNKLVSQAAIRAGRISE
                     ESLPYVPGGNERGFLAPQPLVVWPELDPGIRCRLDDYQLELIGEVAAIPERALCAVFG
                     SAGRLLNARARGIDPRPVLPPERQSEFRIAHTLATDTNDHGVLHPLLRLMSQRLGYRL
                     RRRGLTARRLGLEATYADYTTAVRTVPVAGAVLDAELWEAAQRAFALTISKRMAVRTL
                     ALTLDRLEELDLQLELWAEPATPPVQGDTLQHAVDRIHTRYGSRALTRGRPLSPKRSL
                     LPDHQATTILPNVALPSRTRWASAS"
     gene            complement(1334..1711)
                     /locus_tag="VFD73_10675"
     CDS             complement(1334..1711)
                     /locus_tag="VFD73_10675"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZI74457.1"
                     /translation="MSSVEHDRRIDYIEFSVKSVPEAKRFYGSAFGWSFEDYGPDYAS
                     FADGRLSGGFQTAARVERGGPLVVIYASHLEAMEQRIKQAGGAIVRAIFSFPGGRRFH
                     FTDPSGNELAVWSDQEKGVDGNR"
     gene            complement(1725..>3012)
                     /locus_tag="VFD73_10680"
     CDS             complement(1725..>3012)
                     /locus_tag="VFD73_10680"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HZI74458.1"
                     /translation="LSRVLGTPDPLVRLHQLHSMWVGTMRVRAAGQPGSGAAGQTQPE
                     TERQRTEADEISQLDLLPRGPAAPSPGLPVLDQRSRGTQFVGLSVQSVLNTPAATHMG
                     FWSINPYVGCEFGCMYCYARDTHRWVMERAVEDRRSVGQGGDRVTWESGPASQTLTDL
                     PPYRPSALPPEEAFEKEILVKSEVAEVLARTLAPAKLAGSPLVIGTATDPYQPAERRF
                     QLTRRILEVLRSYHGLSIEIITKSPLVTRDLDLLQAISRNNELSVNISLATADPRLAR
                     RLELRSPIPAARLRALRRLTAAGIDAGLIIAPIVPGITDDWVGLARLMEAAKEAGARY
                     VIGSALRLGPAARRRFLPFLEREFPALYERYRRHYATSDLASRSYQDALTRRLNALRQ
                     AFGFAGDEASGRRRRRLEMAGEKSVRVPQAEQAALL"
BASE COUNT          576 a          964 c          969 g          503 t
ORIGIN      
        1 taccccatga ctcagctggc cgatgcccat cgggtcctcg aaggcaacgc cacattcggc
       61 aaaattgtcg tggcctggtg atccgggagc aatgaacgct ttgggctgag cggacggcct
      121 cgggtcaacg ctctcgatcc atatcgggtg tggatacgat cgaccgcgtg ctgcagggtg
      181 tctccctgaa ccggcggagt ggccggttcc gcccacagct ccaactgcag gtccagctcc
      241 tccagccgat ccaaagtgag cgcgagggtg cgcaccgcca tccgcttcga aatcgtcagc
      301 gcaaaggcgc gctgtgccgc ctcccagagc tctgcgtcga gtaccgcccc agccaccggg
      361 acagtgcgca ccgcagtggt gtaatcggca taggtggctt ccaggccgag ccggcgcgcc
      421 gtgagtccgc gccgccggag ccggtatccc agcctttggc tcatgagccg tagcagagga
      481 tggagcaccc cgtgatcgtt ggtgtccgtc gccagggtgt gcgcgatgcg aaactctgac
      541 tgacgctcgg gcgggagtac cggacgaggg tcgatacccc gggcccgcgc attgaggagc
      601 cggccggcac tcccaaacac agcgcagagc gcgcgctcgg gaatagccgc gacctcgcca
      661 atgagctcaa gctgatagtc gtcgagccgg caccggatgc cgggatcgag ctccggccaa
      721 accactaacg gctggggagc aagaaaccca cgctcattgc cgcccggcac atagggcaga
      781 gattcctcac tgatccggcc ggcccggatg gccgcctggc tgacgagctt gttactggcg
      841 atgccgaccg acaacggaag ccgtagccgt tccagcgctt ctcgccggat ccgggcagcc
      901 acatcctgag gacaaccaaa gagtctgccg gtgccggtga ggtccagaaa ggcatgacca
      961 tagcctcgag gctcgatcgt gggagcgaag acccgcaaaa tttcatgcag cgctcgcgac
     1021 gctcgggcat agagccgcgg attgggcggc agaagaatga gatcgggaca gacccgctgc
     1081 gcagttcgca ccggcattcc gcgagtcagc cccgctcgcc gagcctcgga cgacaaggcc
     1141 agaagcgtcg cccgatcggc cgtgggtgga gcaactgcca gtggccgcga tctgagagcg
     1201 ggcgccacca gcccttccaa ggtggtacaa aaggcaggcg gatcgacaaa cagaaccgaa
     1261 cgcatgacca gagcgtggac ggtgaaccgg tgaacaggac tgacggattc tcgtggcgaa
     1321 ccccgtttac tgtttaccgg ttaccatcca cgcctttctc ctgatccgac cagactgcca
     1381 gctcgtttcc gctcggatcg gtaaagtgaa accggcgacc accgggaaag ctgaaaattg
     1441 cccgaacaat ggcgccacct gcctgcttga tgcgttgctc cattgcttcc aggtgcgaag
     1501 cgtaaatgac gaccaacgga ccaccacgct cgacccgagc tgcagtctgg aaccctccgc
     1561 tcagacgtcc gtcggcaaag ctggcatagt cgggcccata gtcttcgaag ctccagccaa
     1621 atgcgctgcc gtagaaccgc ttggcctcgg gaacgctctt caccgagaat tcgatgtagt
     1681 cgatacggcg atcgtgctcg acgctgctca taacgaccga ctcctcacaa gagggctgcc
     1741 tgctctgcct gagggactcg aacgctcttt tccccggcca tttccagccg gcgacggcgc
     1801 cggccacttg cctcgtcacc ggcaaacccg aaggcctgcc gcaaggcatt gagtcggcgg
     1861 gtcagcgcgt cctgatagct ccggctggcc aggtcgctcg tagcatagtg gcggcgatac
     1921 cgctcataca gcgcggggaa ctcccgctcg agaaatggaa ggaagcggcg ccgcgctgcg
     1981 ggcccgagcc ggagcgccga cccgatcacg tagcgggctc ccgcctcctt cgcggcttcc
     2041 atgaggcgag ccagacctac ccaatcatca gtgatgccgg ggacgatagg tgcgatgatg
     2101 agtccggcat cgatccctgc tgcggtgagc cgccgaagcg cacgcagtcg ggcggcaggt
     2161 atgggagagc ggagctctaa gcgccgggcc aagcgcggat cggcggtggc gagggagatg
     2221 ttcacgctca gctcgttgtt gcgggagatt gcttgcagca ggtcgagatc gcgcgttacc
     2281 agcggagact tggtgatgat ctcgatggaa agcccgtgat aggagcgcaa cacttccaga
     2341 attcggcgag tgagttggaa ccgccgctcg gccggttgat atggatcggt ggcggtgccg
     2401 atgacgagag gactgcccgc cagctttgcc ggagcaagcg tgcgggcgag cacctccgcg
     2461 acctccgact tgaccaggat ttctttttcg aaggcctctt ccggcggtaa ggcggacggg
     2521 cggtacggcg gcaagtcagt cagcgtctgt gacgcagggc cggattccca tgttacccgg
     2581 tcgcccccct gtccgaccga ccgcctgtcc tctaccgctc tttccatcac ccagcgatgg
     2641 gtatcgcggg cgtagcagta catgcagccg aactcgcagc cgacgtaggg gttgattgac
     2701 cagaacccca tgtgcgttgc cgctggggta ttgagcaccg actgaaccga tagtccgacg
     2761 aactgagtac cccgggagcg ttgatcgagg acaggtaagc cgggtgacgg ggcggcggga
     2821 ccgcggggca gcaagtcgag ctgactgatc tcgtcagcct cggttcgttg ccgttctgtt
     2881 tccggctgcg tctgtcctgc agccccgctg cctggctgcc ccgctgccct cacccgcatt
     2941 gtccccaccc acattgagtg cagctgatgc agccggacga ggggatcagg ggtcccgagc
     3001 actcgggaca gc
//
LOCUS       DASRPQ010000938         1043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1050346, whole genome shotgun sequence.
ACCESSION   DASRPQ010000938 DASRPQ010000000
VERSION     DASRPQ010000938.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1050346"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..394)
                     /locus_tag="VFD73_10685"
     CDS             complement(<1..394)
                     /locus_tag="VFD73_10685"
                     /inference="COORDINATES: protein motif:HMM:NF016301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HZI74459.1"
                     /translation="MSVTAAARGLLSCHVCGLLSRGGRGGRTLHCPRCSAPLHARKPN
                     SVARSWAFLIAAYILYIPANVLPIMETSSLFGAQADTIMSGIIYLWHSGSWDLALVVF
                     IASIMVPLLKLIALTLLLISVQRRSAWQP"
     gene            complement(391..>1043)
                     /locus_tag="VFD73_10690"
     CDS             complement(391..>1043)
                     /locus_tag="VFD73_10690"
                     /inference="COORDINATES: protein motif:HMM:NF016301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HZI74460.1"
                     /translation="LSGLGEFMNSPMTVIACHECDLLQREIPLPPGRVARCVRCGAKL
                     YRVENRSIDHALALTLAAAVVFILANTFPIIGLQIQTTRNDTSLVSAVHTLWNQGMWP
                     VAGLVFFTTFLVPAAVLAIMIHILLALKRGRIPAGFTLVMRVLQIFNPWGMVEVFIIG
                     VIVALVKLTHYGVLIPGIALWSLGVLTLLMTATASSFNAHDIWNRVHSAPRRGVAP"
BASE COUNT          232 a          294 c          354 g          163 t
ORIGIN      
        1 gcggctgcca ggcggaacgg cgctggacgg agatcagcag cagggtcagg gcaatcagct
       61 tcaagagcgg caccatgatg ctggcgatga acaccaccag ggccaggtcc cacgaccccg
      121 aatgccacag gtagataatc ccgctcatga tggtgtccgc ctgggcgccg aacagggagc
      181 tggtctccat gatcggcagg acgttggcgg ggatgtacag gatgtaggcg gcgatcagga
      241 acgcccagga acgggccacg ctgttcggct tgcgcgcatg aagcggcgct gagcagcggg
      301 ggcagtggag cgttcggccg ccacgacctc cccgggagag aaggccgcag acgtggcagg
      361 agagcagacc gcgggcggcg gcggttacgc tcatggggct actccccgtc ggggcgcaga
      421 gtgcacccgg ttccagatgt catgggcatt gaatgaagac gccgttgcag tcatcagcag
      481 ggtgagaaca cccagtgacc agagggcgat accggggatc aggaccccgt agtgggtgag
      541 ctttaccagc gccacgatca ctccgatgat gaatacttcc accatccccc atgggttgaa
      601 gatctgcagc actcgcatga caagggtaaa gccggcggga atgcgtccgc gcttcagcgc
      661 caggaggata tggatcatga ttgcgagaac tgcggcagga accagaaacg tggtgaagaa
      721 cacgagtccg gcgaccggcc acatgccctg attccacaag gtatgaacgg cgctgacgag
      781 cgaggtgtcg ttgcgcgtcg tctgaatctg gaggccgatg atgggaaacg tattggcgag
      841 gatgaacaca actgcggctg ccagtgtcag ggcaagcgca tggtcgatgc tcctgttttc
      901 gacgcgataa agcttcgccc cgcaccggac acagcgggcc accctgccgg gcgggagcgg
      961 gatctcacgc tggagcaggt cacactcgtg acaggctatg acggtcatcg gactgttcat
     1021 gaattcacct aaccccgata aac
//
LOCUS       DASRPQ010000939         1969 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_111874, whole genome shotgun sequence.
ACCESSION   DASRPQ010000939 DASRPQ010000000
VERSION     DASRPQ010000939.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1969
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111874"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            282..1595
                     /locus_tag="VFD73_10695"
     CDS             282..1595
                     /locus_tag="VFD73_10695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74461.1"
                     /translation="MAEAITERVRRYFHPHATGDELVTSAPPRENPATSKSQEPRGGG
                     SVTNGIPAIQGPVPECWREQVLTRAKELEALSLWMGPCDEQDNSVVLENGEVLKKAIG
                     VHLKAARQAARGDRLKPPGRFRLPLRRYGARIERARGNLDAAEAHLLSLAPCDYILGQ
                     MPSLLNHVQRHLPPADARRQEFERIAQRLGIKDADHPLHQECKDSSLADKEAIVRDER
                     RKIANIVRGASSAALREHVRLGSFQYVLIITAALMTMLAIGVAITGFLRPTLIPMCFA
                     PQQGGVVTVVCPTHQSQPFVPTGQPGQDGVQVADIDDMVQATAKPADLLVVELVGLTA
                     AAIATAAAIRRLKGSAERYGLPVSLAALKLPTGAITAFLGLLLMRGQFVPGLSALDTS
                     AQILAWALVFGYAQQLFTRLVDQQGQTVLDSVRGADRPQPAPSPP"
     gene            1700..>1969
                     /locus_tag="VFD73_10700"
     CDS             1700..>1969
                     /locus_tag="VFD73_10700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74462.1"
                     /translation="MTVLASPIAAGSSYATAVFGLTGVLIGAFIAGAVSLWVAKQARD
                     AAERAWVRDNRREIYDRFLTYAQTLLIACEEARESETNGEKASVET"
BASE COUNT          376 a          608 c          609 g          376 t
ORIGIN      
        1 caggatctgc tggatgtcca agttgtccgc ctgagtccgg tgctatccag tcagtctgtg
       61 aggaaaccgt gagagatcgc tgcctcggtc cgtgcccgtg gcctgggcca tttcaggctg
      121 aggcgtctcg cggcggatga cccgcctcgt ctgtcagcag gcatcggcat gttcgcgatc
      181 gaatcgggcg gtgctgtatc aatccggtac gtggcacgct ccgaaggagt acgcaggctt
      241 agtaaccagc cctcacgggc tcgggcggca aggggccggt catggctgag gcgatcacgg
      301 agcgggtaag gcgttacttc cacccgcatg ccacgggcga cgagttggtc acctcggcgc
      361 cgccgcgcga gaatcctgct acctcaaaat cgcaggagcc gcgaggcggc gggtcggtca
      421 ctaatggcat tcctgcgatc caaggacccg tgccggaatg ctggcgcgaa caggttctga
      481 cgcgggccaa ggaacttgag gcgttgtctc tctggatggg gccatgcgac gaacaggaca
      541 acagtgtggt cctcgagaac ggtgaggtcc taaagaaggc gattggcgtt catcttaaag
      601 cggccaggca ggcggcccgg ggtgatcgac tgaagccgcc cggacggttt cgcctccccc
      661 ttcgccgtta tggagcacgt atcgagcggg caaggggcaa cctcgacgct gccgaggctc
      721 acctcctcag cctcgcaccg tgtgactaca tacttggtca aatgccgagc ttgctcaacc
      781 atgtgcagcg tcatctccct cctgctgacg cgcgacgaca ggagtttgag cggatcgccc
      841 agaggcttgg tatcaaggat gcggatcatc cgttgcacca ggagtgcaaa gactctagcc
      901 tcgccgacaa ggaagctatt gtcagggacg agcgccgcaa gatcgcaaac atcgttcgag
      961 gggcaagctc ggcggcgcta cgcgagcacg tacgtctggg cagtttccaa tatgtcctga
     1021 tcatcacggc cgcgctcatg actatgctgg caatcggggt ggcgatcacg ggctttctcc
     1081 gtccgaccct gatccccatg tgtttcgctc ctcagcaggg cggcgtagtg acagtcgtgt
     1141 gcccgaccca ccaatcccaa ccgtttgttc ctaccggtca gccaggacag gacggcgtac
     1201 aagtagcaga catcgacgat atggtccagg cgaccgccaa accagcggac ctcctcgtgg
     1261 ttgaactcgt cgggctcacc gcagctgcca tagcaactgc cgccgccatc cgccgtctca
     1321 agggctcggc cgagcggtac ggcctgcccg tttctctcgc cgccctcaag ctcccgactg
     1381 gcgcgatcac tgctttcctc ggcctgctgc tcatgcgtgg ccaattcgtc cccggcctca
     1441 gtgcactgga tacatccgca caaatcctcg cctgggcgct ggtcttcggg tacgcgcaac
     1501 agctgttcac ccgccttgtc gatcagcagg gccaaaccgt actcgacagt gtgcgcggcg
     1561 ccgaccggcc tcagcccgct ccgagtccgc catgaaccat tactaccttt ggaccaggca
     1621 ggagtaatag tctggacggc ggattgtctg gtcggctgat tggaaaccac ggtgagcaag
     1681 aaatggtcgg gcgattacaa tgacggtatt ggccagtcca atagcagcgg gtagttccta
     1741 cgccactgca gtttttggcc ttacgggagt actgatcggc gcgtttatcg ctggtgccgt
     1801 tagcctctgg gtcgcaaaac aggcgcggga cgcggctgag cgcgcttggg ttcgggataa
     1861 tcggcgcgag atctatgacc ggttcctcac ctatgcccag acgctgctca tcgcctgcga
     1921 ggaagcccgg gaatcagaga ccaacggaga aaaagccagc gtcgagact
//
LOCUS       DASRPQ010000940         1259 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3251937, whole genome shotgun sequence.
ACCESSION   DASRPQ010000940 DASRPQ010000000
VERSION     DASRPQ010000940.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1259
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3251937"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..584
                     /locus_tag="VFD73_10705"
     CDS             <1..584
                     /locus_tag="VFD73_10705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74463.1"
                     /translation="QATLSRAKAYLDTLGPTLTAAVTQPAAFVAILAGDPATAELYLR
                     VEYESLSKMGEKGFLAATAVLLARAITAQGRTRYAEAAQLIEISQEAAGGEDLSAQII
                     GLGVSARISADQGRHAEAVDLASSAVVLAARTDLLSQHADALLDLAYVLTVSGNLPHA
                     HAAATEALDLYQQKGNLPGIRESLAHLTQYVPT"
     gene            597..>1259
                     /locus_tag="VFD73_10710"
     CDS             597..>1259
                     /locus_tag="VFD73_10710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74464.1"
                     /translation="MPPDPLSRVNQVELRDAGKTVKINLQVYGFKVGAPVQISGHATQ
                     ENGAVAAFHDIQEVTDITSDELAELQVSATSIEKPEFVQGVPVTVIANATASWITTLQ
                     PDSGSSLPSGVIAKWATPHATYAIRAPHQPSKGTSQTPETSEQTTEERPLRHGKWWDR
                     IKADRLDVVMGGRFTRLFPYLPGARVDQKDLEGLAGPMIAPPEGPEPEGQEDPEENKG
                     IPA"
BASE COUNT          292 a          410 c          366 g          191 t
ORIGIN      
        1 cgcaagctac cctcagccgc gccaaggcct atctggacac cctcggcccg acgttgaccg
       61 cggcagtcac ccagccggcc gccttcgtcg cgatactcgc tggcgaccct gcgaccgccg
      121 agttgtacct ccgtgtcgaa tatgaatccc tcagcaagat gggtgagaag gggtttctcg
      181 ccgccacggc agtgctcctg gcccgggcta tcacggcgca gggccggaca cgctacgccg
      241 aagccgccca gctgatcgaa ataagccagg aggctgccgg aggagaggac ctgtccgccc
      301 agatcatcgg cctgggggtg tcggccagga tatccgccga ccaaggccgt cacgccgagg
      361 cggtggacct tgcatcctcg gcggtggtgc tggccgcgcg aacagatctg ctaagccagc
      421 atgccgatgc cctgctcgac ctggcctatg tcctcaccgt atccggcaac ctcccccatg
      481 cacacgcagc cgccaccgag gcccttgatc tttatcagca gaaaggaaat cttcccggga
      541 tcagggaatc gctcgcgcac cttacccagt atgtacctac ctgaaaggac ttaccaatgc
      601 caccagatcc actcagcaga gtaaatcagg tcgaactcag ggacgccggc aagacagtca
      661 agatcaacct gcaagtgtat ggcttcaagg ttggcgcacc agtccaaata tccggccatg
      721 ccacccagga aaacggggcc gtggctgcgt tccatgacat ccaggaagtg accgatatta
      781 catcagacga gctcgcagaa ttgcaggtat ccgccaccag catcgagaag ccggaattcg
      841 tgcagggagt cccagtgacg gtcattgcga acgcgacagc gtcctggatc accacgttgc
      901 agccggacag cggcagcagc cttccttccg gggtcatagc caaatgggca acaccacacg
      961 ccacctatgc aatacgcgcg ccccatcaac catcaaaagg gacatcacag accccagaaa
     1021 cgtccgagca aacaacagag gaacggccgt taaggcatgg caagtggtgg gatcggataa
     1081 aggccgatcg cctcgacgtg gtgatggggg gccgcttcac caggctgttc ccatacctgc
     1141 ctggcgcgag ggtcgaccag aaggacctcg aagggctggc cggtcccatg atcgcgccgc
     1201 cagaagggcc cgaaccagag ggccaggagg atcccgaaga aaacaaggga ataccggcg
//
LOCUS       DASRPQ010000941         1598 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1677990, whole genome shotgun sequence.
ACCESSION   DASRPQ010000941 DASRPQ010000000
VERSION     DASRPQ010000941.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1598
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1677990"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..781
                     /locus_tag="VFD73_10715"
     CDS             <1..781
                     /locus_tag="VFD73_10715"
                     /inference="COORDINATES: protein motif:HMM:NF013591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HZI74465.1"
                     /translation="EGLLDLESRKGKAPGGYCETLHFNGRPFIFMNAVGVVDDVMTLL
                     HEAGHAFHAFASHPLTLIWQRHPGSEAAELASMSMEFLASPHLLQPVGYFTPAEARSA
                     WLEHLEDVLLSLVHIAAVDAFQTWIYTSPEGGNAAARDAMWLQLRRRFERGVDWTGLD
                     QERVARWYRQLHIFMYPFYYIEYGIAQLGALQVWRNSLADPAAAVARYREALALGAVR
                     RLPEIYSTAGARLIFDAAGIKELVQLVESRIEQLRAELPRS"
     gene            856..1074
                     /gene="infA"
                     /locus_tag="VFD73_10720"
     CDS             856..1074
                     /gene="infA"
                     /locus_tag="VFD73_10720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012039277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HZI74466.1"
                     /translation="MAKEEGIEMEGVVTEVLPDRNYRVMLENGHEILAYAAGKMSKFK
                     IRVLEGDRVSVVLSPYDLTRGRVIYRHK"
     gene            complement(1182..1394)
                     /locus_tag="VFD73_10725"
     CDS             complement(1182..1394)
                     /locus_tag="VFD73_10725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004094893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HZI74467.1"
                     /translation="MARTIGTVKWFNDAKGFGFITPENGDKDCFVHHTAIKAEGFRSL
                     SEGDRVEFDIVQGAKGPAAENVTKVK"
BASE COUNT          302 a          478 c          497 g          321 t
ORIGIN      
        1 cgagggtcta ttggatctgg agagccgcaa gggcaaggca cctggcggct actgcgagac
       61 actccacttc aacggccgtc ccttcatctt catgaatgcc gttggagtgg tagacgatgt
      121 catgaccttg ctccacgaag cagggcacgc attccacgct tttgcctcgc atcccttgac
      181 gctcatctgg caacgccacc ccggctccga ggcggccgag ctggcctcga tgtccatgga
      241 gttcctcgca tcgccccatc tgctgcagcc ggtcgggtat ttcacaccag ccgaagcccg
      301 gagcgcctgg ctggagcacc tggaagacgt gctgctgagc ctggtgcaca tcgctgcggt
      361 cgatgcgttc cagacctgga tctataccag tcctgagggc ggtaatgccg ccgcgcgcga
      421 tgccatgtgg ttgcagctga gacgccgatt cgagcggggc gtcgattgga ccgggctgga
      481 ccaggagcgc gtggcccgct ggtaccggca actgcacatt ttcatgtacc ccttctatta
      541 catcgagtac ggtatcgctc agctgggggc gcttcaggtc tggcgcaaca gtttggccga
      601 tcctgctgcc gcggtggctc gctatcgcga ggcgctcgcg ctcggtgcgg ttcgccgcct
      661 gcccgagatc tacagcactg ccggggctcg gctcatcttc gatgccgcgg gaatcaagga
      721 actggtgcag ctggtggaga gtcgcatcga gcagcttcgc gccgagctgc cgcggagttg
      781 attcccggac aaggcggggc aagattccac ccgcttccct cattcgaccg gcgagccccc
      841 tttgggagag agtggatggc caaagaagaa ggcattgaaa tggagggcgt cgtcaccgag
      901 gtgctcccgg accggaacta ccgggtgatg ctggagaacg gacacgagat tctggcgtac
      961 gcggccggga agatgagcaa gttcaagatt cgagtgctgg agggcgaccg cgtaagcgtg
     1021 gtgctctcgc cgtatgatct gacccgcggc cgggtgattt accggcacaa gtgattccgc
     1081 atcccggggt gatcccgagc gccgcgaggg atctcctttg aaaagacaag agggccgctc
     1141 ttatgagcgg ccctctagca caggctcaca aggggtgagc cctacttcac cttggtgacg
     1201 ttctcggcgg cgggcccctt cgcaccctgc acgatgtcga actcaacccg gtcgccctcg
     1261 gaaagactcc ggaagccttc cgccttgatg gcggtgtgat ggacaaaaca gtccttgtcc
     1321 ccattttccg gggtgatgaa cccaaaaccc ttcgcgtcgt taaaccactt caccgtgccg
     1381 atggtgcgag ccattgcgcc tactccatgt ttgtttgact gcgtcgacgt ccggagtgtc
     1441 cgaagcgccg agtttttatg atcgcaggcc agtcctgcgt cataaaaaaa gaagacccag
     1501 gggcgattca cccgggtcta aaatccctgt gcggaaaatc tgacgggtca gatttgcaac
     1561 tggtgacaaa tcgcggggac aaatctgtat tgtcgtcg
//
LOCUS       DASRPQ010000942         2422 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1364453, whole genome shotgun sequence.
ACCESSION   DASRPQ010000942 DASRPQ010000000
VERSION     DASRPQ010000942.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2422
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1364453"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..862)
                     /locus_tag="VFD73_10730"
     CDS             complement(110..862)
                     /locus_tag="VFD73_10730"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI74468.1"
                     /translation="MQLSPAQDALRAEQVTKRFGATTALDGVTVAVEHGQCVALVGES
                     GSGKTTLLRCFNRLVDPDAGRILIEGTPAVDLDPIALRRRIGYIPQDGGLLPHWTVQR
                     NVELVPRLRQVHNAGDLAIRALELVGLDPGLFAERRPSQLSGGQRQRVAVARALAIRP
                     DLILLDEPFGALDAITRADVQASFARIRQELGITAVLVTHDLREAFLLGDQVVVMRQG
                     RVEQSATPAQLRSAPETDYVRQLLLRAQVIEA"
     gene            complement(862..1251)
                     /locus_tag="VFD73_10735"
     CDS             complement(862..1251)
                     /locus_tag="VFD73_10735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74469.1"
                     /translation="MGDKRLAKRAGSRTLRDSAACRVGSIVALTERSPVVITAPGRLR
                     GKSPMMLRIVALIQGVFYLATGVWPLLHIGSFQLESIVLAVGCALGLATIDLVYALGG
                     RISAVYLADAAVELGLASMWGFARLRA"
     gene            1431..2213
                     /locus_tag="VFD73_10740"
     CDS             1431..2213
                     /locus_tag="VFD73_10740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74470.1"
                     /translation="MYRIELSPGEETVFRSIEELAVAIKRGIVTPRARIYHNASSKWL
                     PIQFHPHYRTALEMPLSQSALVAGPSAKPLSSLTLEPPSVDASIQSPLSATSSSDTEP
                     TKKRKSRRSQQKSTDSKRPRSGGKPRRQLRIALVGTLLLGGAQWVLSEPLFSRVEPAT
                     LFHTHREFLPAPANTAAMIPVIETSDPAASAASFGGAGTNRELPVPPRSVRAVENPAT
                     DSIEPPPADLAIAGSPIPLPDSIPAKSKAPSGVKQKEPQRRR"
BASE COUNT          496 a          794 c          704 g          428 t
ORIGIN      
        1 tcgccaaacg gcttcgatgc tacaacgatg gggcggaggt gcgcgggagc cggtacttgg
       61 ggatcgatgc gcctgcccgg aaggagaacc gccagcagaa tgacgccgat cacgcttcga
      121 tcacctgggc acgcagcagc aattgccgta catagtccgt ctccggggcg cttcgcagtt
      181 gggccggagt ggcagattgc tcgactcttc cctgccgcat caccactacc tgatcgccca
      241 ggagaaaggc ctcccgcagg tcgtgcgtca ccaagaccgc ggtgatgccg agctcctggc
      301 ggatccgggc gaagctggct tgcacatcgg cccgagtgat ggcatccagg gcaccgaaag
      361 gctcgtcgag caatatcagg tcgggacgga tggccagagc acgggccact gccacacgct
      421 ggcgctgacc accggagagc tgactcggac ggcgttcagc aaagagtccg ggatccagcc
      481 ctacgagctc cagtgcccgg atcgccagat cgccggcatt gtggacctgc cggagtcgag
      541 gcaccagctc gacgttccgt tgcaccgtcc agtgaggaag cagtccgcca tcctgaggga
      601 tgtagccgat gcgacgccgg agtgcgatcg gatccagatc cacggcgggc gtaccttcga
      661 tcagaattcg cccggcgtcg ggatcgacca gccgattgaa acaccgaagc agagttgtct
      721 ttccggaacc gctctcgccc accagcgcga cacattgacc atgttctacc gcgaccgtca
      781 cgccgtctaa cgcggtagtt gcaccgaagc gtttggtgac ctgctcggct cgtaacgcgt
      841 cttgagctgg cgacagctgc atcaggcgcg caggcgggcg aatccccaca tcgaggccag
      901 cccgagctcc acggcagcat ctgccaggta taccgccgag atccgtccgc cgagcgcgta
      961 caccagatcg atggtggcca ggccgagggc gcatcccaca gccaagacga ttgattcaag
     1021 ctggaagctc ccgatgtgga gcagcggcca aactccggta gccagataga aaactccctg
     1081 gatcaacgca acgattcgca gcatcatcgg cgattttcct cgcaatctac caggagcagt
     1141 gatgaccacc ggagaccgct ccgtcagagc gacgatgctg ccgacccggc acgctgcaga
     1201 atcgcgcagc gtccggctcc cggctcgctt ggccaaccgc ttgtctccca ctcggctgta
     1261 tcccggcgag acagcgcttg catctcgttg tcctctcaga gtcgaaagat gctgctgtca
     1321 ccgcggcatg aacgaaagtg cactgcaacg ctgcctgaat attgcgtggg ttgaccagcc
     1381 tcatccactc gctgttcgct cgacaacctc agcactcatg agggtcgtgt atgtatcgca
     1441 tcgagctctc gcccggcgaa gaaactgttt tccgttcaat cgaggagctg gcggtagcga
     1501 tcaagcgagg gattgtaaca cctcgcgccc gcatctatca caacgcttcc agcaaatggt
     1561 taccgataca attccatccc cactatagaa cagccctgga aatgccgctg agccagtcgg
     1621 ctctcgtagc cggcccctcg gccaagccgc tgtcatcgct tacactagag ccccccagcg
     1681 tcgacgcgtc gattcaatcc ccgctctcgg caacaagctc gagtgacacc gagccgacca
     1741 agaagcggaa gtcccgacgg tctcagcaga agtccaccga cagcaagcgc cctcgctccg
     1801 gcggcaagcc tcggcggcag ctgagaatag ccctggtcgg aacattgctg ctcggcggcg
     1861 ctcagtgggt tttgtcggag ccacttttct ctcgagtaga accggccacg ctgttccaca
     1921 cccaccggga atttctacca gcacccgcca acaccgcggc catgattcca gtgatcgaga
     1981 ctagcgatcc ggctgcttcg gctgcctcgt tcggcggagc cggcaccaac cgcgaactcc
     2041 cggttccacc acgctctgtt cgagctgtag agaaccccgc caccgattcg atcgagcccc
     2101 caccggcgga cctcgctatc gctggatctc cgatcccgtt gcctgattcg attccggcga
     2161 agtcgaaagc tccatcaggg gtgaagcaga aagagcctca gcggcgtcga tagccggtgt
     2221 gactcatccc acagcagtcg tctcccaccg agccaatact ccagcggcgt aagtccttgt
     2281 ttatcaacag cttatgttga taagcctgtg gataacgagt tgctggtgtg gaaaaccccg
     2341 gaacgaacct tcgggagttc gcgcgcgggc atcgcggtct acctcaggga gagtttgcca
     2401 tggcgagggc gatctggagc gg
//
LOCUS       DASRPQ010000943         1224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_426459, whole genome shotgun sequence.
ACCESSION   DASRPQ010000943 DASRPQ010000000
VERSION     DASRPQ010000943.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_426459"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(211..489)
                     /locus_tag="VFD73_10745"
     CDS             complement(211..489)
                     /locus_tag="VFD73_10745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74471.1"
                     /translation="MSREAWSAMFMIFGLVDGGFLMAINGAPADISPEASLATRTHLR
                     PVALFLAGAAQPIAIPVRVSPGRLGVLLGHGFGAVNPWGRAGFARKKV"
     gene            542..826
                     /locus_tag="VFD73_10750"
     CDS             542..826
                     /locus_tag="VFD73_10750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74472.1"
                     /translation="MLPEPRVSHCGPVSPLLRSVVAVSSGLTTKAETHEKDGQSPGNA
                     AATLAITAGTASAIPSHPAGHRFAWPGTVAYEVDNEPYGRWPAGPAAGGG"
BASE COUNT          238 a          429 c          373 g          184 t
ORIGIN      
        1 cgacgacccg gcccggtgag cccggtcacc tccgggcagt tcccaggtga tgaccgggat
       61 caggaccgcg tcgaacccgc gggccaggcc ttccccgtag cgcagtgcat gcaggctgcc
      121 cggcgagccg ctcgtcccga cgagcaccct gcctacgccg aacaccgttc agccactttc
      181 ttactggatc ctggatggca ggacatctgc tcacaccttc ttccgcgcga agcctgctcg
      241 cccccaggga ttgacggcgc caaagccgtg tcccaacagg acacccaatc ggccggggct
      301 cacacgcacc ggaatggcaa tcggctgcgc agcaccggca aggaacagcg ccaccggccg
      361 cagatgcgtt cgtgtggcta ggctcgcctc tggcgagatg tctgccggtg cgccgttaat
      421 ggccatcagg aaaccgccgt ccacgagtcc gaagatcatg aacatcgccg accaggcttc
      481 ccggctcacc tagtgtgatc ctaggctccg ctgggatacc cgccaagggc gcgaacgtcg
      541 agtgctgccg gaaccgcgcg taagccactg cggcccggtc tctccgctcc tgcgctccgt
      601 cgtagctgtt tcatctggcc tcacgactaa ggcagaaacg catgagaaag acggtcagag
      661 tcccggcaac gccgccgcca cgctggcgat cacggcaggc accgcctccg cgatcccctc
      721 tcatccggcc ggacaccggt tcgcctggcc cggcaccgtc gcctacgagg tcgacaacga
      781 gccatatgga cgctggccgg ccggaccggc cgccggaggt ggctgagctc caccggccga
      841 gagaagggct atgcggacgc tgggatagtg gtcgacctcg agaagaaccc agacgcccgt
      901 cttgcagtcc ggttcaccga cgacgccggc cttcactagc ggatcgacca ggacctcaca
      961 tccagcaact cgacaaccga gacgactggt aaggaagccc catatcgaag atcccgaagc
     1021 caggacagcc agcacgcacg gcactgccag tgttggctat ggcagtcgcg cggctgtagt
     1081 aacggcgcgg gagttgacgg ctgagacaag ctacccagcc gttaaagagg ccaggtggcg
     1141 ggcgaacagt gaacacacag ccgaatatcc gggcgcgtgt accccggctc gtgttacctt
     1201 tgtcgcatga tttccccgat ccgg
//
LOCUS       DASRPQ010000944         1282 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2629965, whole genome shotgun sequence.
ACCESSION   DASRPQ010000944 DASRPQ010000000
VERSION     DASRPQ010000944.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1282
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2629965"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(298..>1282)
                     /locus_tag="VFD73_10755"
     CDS             complement(298..>1282)
                     /locus_tag="VFD73_10755"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZI74473.1"
                     /translation="VLNAVYEADFKGFSYGFRPGRSQHDALDALAVGLGRRVNWVLDA
                     DIRGFFDHLDRGWLERFLRHRIADERILRLVMKWLNAGVLEDGKLSDSGEGTPQGGSL
                     SPLLANVYLHYVLDLWVDHWRKTQARGNVIITRFADDFIVGFQYQDDAERFLEELRGR
                     LAKFSLELHPGKTRLIEFGPHAARLRKARGEGKPETFTFLGFRHIARMNRQGRFWVQR
                     ITDKKKMTAKLKSVKAELMRRRHLPVPEQGRWLASVIRGHEAYYAVPGNAEAVQAFRY
                     HVTRHWRFALSRRSQKGRVTWERMSRLARRYLPTTRIRHPWPQARFAARYP"
BASE COUNT          204 a          450 c          389 g          239 t
ORIGIN      
        1 taggcaccgt ggcacagcag gagcacggct gtgaccggta ccgccggtag ccagccctgc
       61 cagtacagac gggcgttgtc gacgccggtc aagtcgccct cgatcttgtc cgttacgccg
      121 accgccaacg cattggcggg cgaaggggtg ccttcgtgat ccggtagttc ctgctgcctt
      181 cccggctgaa tatcagatgc tggcgagggt ctcctcagat agtcgcggta ggggccgcca
      241 ttgctggcgg ccccccgcgc agatcccagc gagcgggatt accgcactgg gctcctgtca
      301 tgggtatctg gcggcgaacc gcgcttgggg ccaggggtgc ctgatcctgg tcgtgggcag
      361 gtagcgcctg gccaggcggg acatccgctc ccaggtgacc cggcctttct ggctgcggcg
      421 cgacagcgcg aaccgccagt gccgggtgac gtggtaccgg aatgcctgca ctgcctccgc
      481 gttgccgggg acggcgtagt acgcctcgtg tccccggatc acgctggcca gccatcttcc
      541 ctgctcgggg acgggcagat ggcggcggcg catcagttcg gctttcaccg acttcagctt
      601 ggccgtcatc ttcttcttgt ccgtgatccg ctggacccag aaccgtccct gcctgttcat
      661 ccgggcgatg tgccggaatc ccaggaacgt gaacgtctcc ggcttcccct cgccccgcgc
      721 cttgcgtagc cgggccgcgt gcggcccgaa ctcgatcagc cgggtcttgc cggggtgcag
      781 ttccaggctg aacttcgcga gccttccgcg cagttcctcc aggaacctct cagcgtcgtc
      841 ctggtactgg aacccgacga tgaagtcgtc cgcgaaccgc gtgatgatga cattcccgcg
      901 cgcctgcgtc ttcctccagt gatcgaccca caggtccagg acataatgca aatatacatt
      961 tgcaagcaac ggagatagcg aaccgccctg tggcgtgccc tccccgctat cggacaactt
     1021 cccgtcctcc aagactcccg cgttcagcca tttcatgacc agccgcagga tcctctcgtc
     1081 cgcgatccgg tgccggagga acctttccag ccatccccgg tcgagatggt cgaaaaagcc
     1141 gcggatgtcc gcgtccagca cccagttcac ccgcctcccg agcccgaccg ccagggcgtc
     1201 cagcgcatca tgctggctcc ttcccggacg gaacccgtag gagaagccct tgaagtccgc
     1261 ctcgtaaacc gcgttcagca cc
//
LOCUS       DASRPQ010000945         1685 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1364822, whole genome shotgun sequence.
ACCESSION   DASRPQ010000945 DASRPQ010000000
VERSION     DASRPQ010000945.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1685
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1364822"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(259..486)
                     /locus_tag="VFD73_10760"
                     /pseudo
     CDS             complement(259..486)
                     /locus_tag="VFD73_10760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611628.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(510..1082)
                     /locus_tag="VFD73_10765"
     CDS             complement(510..1082)
                     /locus_tag="VFD73_10765"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI74474.1"
                     /translation="MEQAVAEERAQHPDTPVEVWATDEHRIGLKPILRRVWAPKGQRP
                     IALGHHRYKWLYVTAFVQPTSGEVFWYVSNGVSKPFFAALLALFAREAGAGRERIVVL
                     GLDNAGWHTAPNLVVPDGIRPVYLPRYSPELQPAEHLWPVLDEPLANRHFETLTDLEQ
                     VVTERCRILNRDQLKPGTDFHWWPKPHIPI"
     gene            complement(995..1567)
                     /locus_tag="VFD73_10770"
     CDS             complement(995..1567)
                     /locus_tag="VFD73_10770"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZI74475.1"
                     /translation="MARVAGHLSVEDLEAGFRSARDPTAVRHFQVIWLLARGHTIADV
                     AAVTSFVPRWIEQLLARYNAEGPEALGDLRRRNGGVPSVLRPALLERLRARLTQPPPD
                     GGLWSSRKVAAWMAGELGLAAVLPQRGWEALKAIGWSVQKPRPRHPASATPEEREAFK
                     KSWNRLSPRSGPSTRTRQSKSGRPTSTASG"
BASE COUNT          302 a          564 c          535 g          284 t
ORIGIN      
        1 tgagggcttg gccgttaggc tggctcgggc cccagttaag cgtgtgatat tgttaagaaa
       61 tactttcggg ctcaacggcc gggcagtcca ccatacgact cgctaacgag tccactcaga
      121 atctgccaac tcggaaattc gggactcgca ctcggcgaga cggcggcgga gatcttccaa
      181 atcgtcccag ccgtaaccca ccgcccacca agcaggcaca agatgtccat aatggatacc
      241 accctaccct acggcctgtt atggcttgat ccaatcgagg gtggcggcca ggcagaggac
      301 gcccatgaag ctggaggccg tcttctcgta gcgggttgca atcgcgcgcc actctttcag
      361 ccgcgcccag agccgctcca cgtagttacg gttattgtag acccagtccg ggcaggacac
      421 tggggcttcg ttctgcttgg acgggatcgc tggacgcgcc cccaggttcc agatgtgctc
      481 gcgaaaggcg tgatacggtt tccggctgat tagatcggga tatgcggctt gggccaccag
      541 tggaagtctg tgccgggttt gagctgatcg cgattgagaa tacgacagcg ctcggtgacg
      601 acttgctcga gatcggtcag ggtctcgaag tgccggttgg cgagtggctc atccaggacc
      661 ggccacaggt gttctgcggg ctgaagctca ggcgaatacc ggggcaggta aacgggccgg
      721 atgccatccg gcacgaccag gttgggtgcg gtgtgccagc cggcgttgtc gagcccgagt
      781 acgacgatgc gctcccgtcc tgccccggcc tcgcgcgcaa acagcgccag cagcgcggcg
      841 aagaacggct tggacacccc gttcgatacg taccagaaca cctcgcctga ggtcggctgc
      901 acgaaggcgg tcacgtacag ccacttatag cggtggtgac caagcgcgat gggccgctgc
      961 cccttgggcg cccagacccg gcgtaagatc ggcttcagcc cgatgcggtg ctcgtcggtc
     1021 gcccagactt cgactggcgt gtccgggtgc tgggcccgct cctcggcgac agcctgttcc
     1081 agcttttttt gaacgcctcc cgctcctcgg gcgtggccga ggcagggtgg cgggggcggg
     1141 gcttctgcac cgaccagccg atcgccttca gggcctccca gccgcgttgg ggcaagaccg
     1201 cggcgagccc gagttcgccc gccatccagg ccgccacttt gcggctggac cacaggccgc
     1261 catcgggcgg tggttgagtc aagcgcgcac gcaaccgctc cagaagcgcg gggcgcagca
     1321 cgctcggcac gcctccattg cgccggcgca agtcgcccag cgcctcagga ccttccgcgt
     1381 tgtagcgggc gagcaactgc tcaatccagc gcggcacgaa gctcgtcacc gccgcgacgt
     1441 ctgcgatcgt gtgcccccgg gccaaaagcc agatcacctg aaagtgccgc accgccgttg
     1501 gatcgcgcgc cgaccggaag cccgcctcca ggtcctcgac gctcagatga ccagcaaccc
     1561 gcgccatggc tcgcctccgc gactcatggc gcaccagcct aacggctccc caacaaccca
     1621 ggaatcctca atccgagtcc atcgcccgga acccgtatga gtggctccta aacgcgccga
     1681 ggcgg
//
LOCUS       DASRPQ010000946         1373 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2932047, whole genome shotgun sequence.
ACCESSION   DASRPQ010000946 DASRPQ010000000
VERSION     DASRPQ010000946.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1373
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2932047"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1197)
                     /locus_tag="VFD73_10775"
     CDS             complement(<1..1197)
                     /locus_tag="VFD73_10775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74476.1"
                     /translation="MTLPAAYLAWSLRSSYVNGSALTAVAGPSGTLFNTPTVGSGWTD
                     FASASSEYVSTVSAITNPAGNWTAYARMRPNLVPPVGAGISREALTFGMPAVAGPPPN
                     NHRGHMLGLAETTGLPVAYLTNGLADTFVYGSTAMAVGRWLTMVSVWDGTYFWLRVYD
                     SCARCVSVTRLLTGYTPVVESGQPFELARRTYLGSWYWEGGISHGGLYDSALSADGCA
                     ELAGECNSTADWMLAASTRLIPYVTIEGLGTPAGQYRWSIGEPKTYDPARLVGGAWSR
                     RGDCFLDRSLGESSCVALYRCNESSGAPLDYSGNGYDGQAPNGAFQGSGPVDYALDFD
                     GTDDYCELADFGLSDTHSVAVAFRLDSTTGNRTILGKHDPTSGFAAGREDLWMLQARS
                     GTLYLSL"
     gene            complement(1194..>1373)
                     /locus_tag="VFD73_10780"
     CDS             complement(1194..>1373)
                     /locus_tag="VFD73_10780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74477.1"
                     /translation="SIWTTKLSAGYPARLFADETQVATSSAYSLLKTRDVAEPYERSR
                     EYPVFWNVGLKGRAV"
BASE COUNT          264 a          428 c          463 g          218 t
ORIGIN      
        1 gagcgacaag tacaaagtgc ccgagcgagc ctgaagcatc cagaggtcct cccggccagc
       61 ggcgaagccg gaggtcgggt cgtgtttgcc taggatggtc ctgtttccgg tggtgctatc
      121 gagcctgaac gccaccgcga ccgagtgggt atcgctcaag ccgaagtcgg ccagctcgca
      181 gtagtcatcg gtgccgtcga agtcgagggc gtagtccacc ggaccggaac cctgaaaggc
      241 gccgttcggg gcttggccgt cgtatccgtt gccagagtaa tcgagcgggg ccccagagga
      301 ctcgttgcag cggtagagag cgacgcacga ggactccccc agcgagcggt ccaagaagca
      361 gtcaccgcgg cgagaccagg ccccacccac aaggcgagcc gggtcgtagg tcttgggttc
      421 gccgatgctc cagcggtact ggcccgccgg agtcccgagg ccttcgatgg tgacgtatgg
      481 gatgagtcgg gtcgaggccg ccagcatcca gtccgcggta gagttgcact cgcccgccaa
      541 ctcggcgcac ccgtcggccg acagcgcgct gtcatacagc ccgccgtgag agattccgcc
      601 ctcccagtac caagagccca gatatgtcct acgggccagc tcgaagggct ggccggattc
      661 gacaaccgga gtgtagccgg tcagcaacct ggttaccgac acacagcgag cgcaggagtc
      721 gtagacccgc aaccagaaat aggtgccgtc ccataccgac accatcgtca gccagcgacc
      781 caccgccata gcggtcgagc cgtacacaaa ggtatccgcg agcccattcg tgaggtacgc
      841 cacgggcaga ccagtggtct cagcgagacc cagcatatgc ccgcggtggt tgttcggtgg
      901 gggcccagca accgcaggca tgccgaaagt cagagcttcg cgactgattc cggcgccgac
      961 aggaggtacg aggttcggcc tcatgcgcgc ataggctgtc cagttgccgg ccgggttcgt
     1021 gatggcggag acggtgctaa cgtactccga gctggctgag gcgaaatcgg tccaaccgga
     1081 gcccacggtc ggggtgttga agagggttcc gctcgggcca gctacggccg tcagagcgct
     1141 tccgttgacg tagctgctcc gcaggctcca ggcgagatag gcggccggca gagtcatacc
     1201 gcacgcccct tgaggccaac gttccagaag acggggtact ctcgactccg ttcgtacggc
     1261 tcggcaacgt cgcgggtctt taggagcgag taggctgaac tggttgccac ctgggtctcg
     1321 tccgcgaaca gtcgggccgg gtagccggcg gagagcttag tggtccagat gga
//
LOCUS       DASRPQ010000947         1179 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_426761, whole genome shotgun sequence.
ACCESSION   DASRPQ010000947 DASRPQ010000000
VERSION     DASRPQ010000947.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_426761"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(79..>1179)
                     /locus_tag="VFD73_10785"
     CDS             complement(79..>1179)
                     /locus_tag="VFD73_10785"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HZI74478.1"
                     /translation="QGEADPVCNNRVHAALPLINPLPSRREGNWVSIYQSCPWLPTPL
                     PAILLKIIFKKSATMPDTEDLAIFVRVVELGSLSAVGRDMRLSAAVVSNRIARLEKDV
                     GTRLLNRTTRHVSLTEDGSRYYDHCVVILNELEQAESSLDAITAEPRGPIKVTVPCAF
                     GRLHVAPHVPQFLERHPQMQVRLHMTDMLVDLIQERIDLAIRIAELTDSTAIVRKLAS
                     NRRLIVASPDYLKRHGTPQVPEDLLEHNCLLLRFPGSKQFRWTLRGPDGPMTLRLSGN
                     MDSNNGEALRDWCLAGHGLALKSLWEIVDDLNEGKLVPVLADYPPTSLGIYALYPHSQ
                     HAPPRVRVFIDFLAEVFGPKPAWERRLKVKLA"
BASE COUNT          211 a          343 c          403 g          222 t
ORIGIN      
        1 atccggagaa tttcttccac atgaatcaga atatccggcc ttcatgagtc ggcgccggcg
       61 ggtgggtgag aggcaaactt acgccagctt gaccttcagc cttctctccc acgccggctt
      121 cggcccgaat acctccgcca ggaagtcgat gaacacgcgc acgcggggtg gggcgtgctg
      181 gctgtgggga tagagcgcgt agatgcctag gctggtcggc gggtagtcgg ccagcaccgg
      241 caccagcttt ccttcgttga gatcgtcgac gatctcccac agagacttga gcgcgaggcc
      301 gtggccggcg aggcaccagt cgcgcagcgc ctcgccattg ttgctatcca tgttgccgga
      361 gaggcgaagc gtcatcggcc cgtcgggacc gcgcagggtc cagcgaaatt gcttggatcc
      421 cggaaagcgc agcaataggc aattgtgctc cagcagatcc tccggcacct gaggcgtgcc
      481 gtggcgcttg agatagtcgg gcgaagcgac gatcagccgg cgattgctgg ccagcttgcg
      541 cacgatggcg gtcgaatccg tgagctccgc gatacggatg gcaagatcga tgcgctcctg
      601 gatgaggtcg accagcatgt ctgtcatgtg caggcgcacc tgcatctgcg ggtggcgctc
      661 caggaattgc gggacgtggg gcgcgacatg caggcgaccg aaggcgcagg ggaccgtgac
      721 cttgatcggt ccgcgcggct ccgcggtgat cgcatcgagg gagctttccg cctgttccag
      781 ctcgttcagg atgacgacgc aatggtcgta gtagcgcgag ccgtcctcgg tcaggctgac
      841 gtgccgggtg gtgcggttga gcaggcgggt gccgacgtcc ttttccagcc gggcgatccg
      901 gttgctgacc acggccgccg acagacgcat gtcccgcccg acggccgaca ggctccccag
      961 ctccaccacc cggacgaata tggccagatc ctcggtgtca ggcattgttg ccgatttctt
     1021 gaagatgatt ttcagtagaa tggcaggtag tggcgtcgga agccaggggc agctttggta
     1081 aattgagacc cagttgccct ccctccggct ggggagggga ttgatgaggg gaagagcagc
     1141 atggacccga ttgttgcaga ctggatcagc ctcgccttg
//
LOCUS       DASRPQ010000948         1675 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2630394, whole genome shotgun sequence.
ACCESSION   DASRPQ010000948 DASRPQ010000000
VERSION     DASRPQ010000948.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1675
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2630394"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            26..775
                     /locus_tag="VFD73_10790"
     CDS             26..775
                     /locus_tag="VFD73_10790"
                     /inference="COORDINATES: protein motif:HMM:NF025019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4143 domain-containing protein"
                     /protein_id="HZI74479.1"
                     /translation="MDRILSGGFPMILQRLTTRARTSWFADYVDLVVMRDVLDIARVR
                     QREALPRLLRQFAAQTGQLLNISKAGQAVGLESSTANRYATLLEAAFMIQRLPAWGTT
                     LGKRIAAYPKVHVIDSGLAAWLLGLSAAKISSRDPAVLTEFGHLVETFAVGEILKQVS
                     WSDQAATAAYFRTQDGDEVDLVLETWDGRVAGFEVKAGSRVQDTDLSGLRLLRDRLGD
                     RFMVGYLLNLGELAYRKEERIMIMPLSGLWS"
     gene            1047..1673
                     /locus_tag="VFD73_10795"
     CDS             1047..1673
                     /locus_tag="VFD73_10795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74480.1"
                     /translation="MHHRFKKLAGALAAIGLTGLTMAGTSTAHAAVLPPDGTWVEIFA
                     PEIHSNGISLCADDPGGSTAQFQNLQLWRCHGYASDGIPQRWQFWIAGTNSAGPTFRI
                     DNTGGSNWCIGLDVRMTAATPYAQWAGKNIVQESCAIATGSQVVWNVLPATQSPDPDN
                     QVMIVSTDTPAGQQPYCVAANTFLDQNGNRLIDEPCDPYNSSQWFAFT"
BASE COUNT          299 a          552 c          537 g          287 t
ORIGIN      
        1 gcgtccggtg accagggatg agtacgtgga tcgcatcctg tcaggcggct tccccatgat
       61 cttgcagcgc ctgacgacga gggcccgcac gtcgtggttc gccgactacg tggaccttgt
      121 cgtgatgcgc gacgtgctcg acatcgcccg ggtgcggcag cgcgaagcgc ttccccggct
      181 gctccgccag tttgcggcgc agaccggcca gttgctcaac atctccaaag ccgggcaggc
      241 cgtcggcctg gaaagcagca ccgcgaaccg ttacgcgacc ctgctggagg ccgccttcat
      301 gatccagcgg ctgcccgcgt ggggcacgac tcttggcaag cggatcgccg cgtaccccaa
      361 agtgcacgtg atcgactccg ggctggccgc ctggctgctc gggctcagcg ctgcgaagat
      421 cagcagccgc gacccggccg tgctgaccga gttcgggcat ctcgtcgaga cgttcgccgt
      481 cggggagatc ctcaagcagg tgagctggtc cgaccaggcg gccacggccg catacttccg
      541 gacgcaggac ggcgacgagg ttgaccttgt actggagacc tgggacggtc gcgtcgccgg
      601 attcgaggtg aaggcgggat ctcgtgtcca ggacaccgac ctgagcgggc tccgtctgct
      661 ccgcgaccgg ctaggtgatc ggttcatggt cggctacctg ctcaacctcg gggaactcgc
      721 ctaccgcaag gaggagagaa tcatgatcat gccgctgtcc gggctatggt cctgagcatc
      781 aggcagccct ctgggcagaa gcgccgcaag tgtgtggtta tcgctgacac tgcggactgt
      841 tctggcactt ccatttaact cgttgagctg ggagaactga gcttcggtgg gcgtaggaca
      901 ccatcgatgt ggtccgcact gcccgcggcc atcccgtcaa accggcttca gtgctgcttc
      961 agctccgtgc cagcccggat ccgtaacgtt gcgacagggt ccggtgcagc caccgggcgt
     1021 gcctcgcgga caaggacagc tggcacatgc accatcgctt caagaaactc gccggggcgc
     1081 tcgccgccat aggactgact ggcctgacca tggccgggac cagtaccgcg cacgcggccg
     1141 tgctcccacc ggacggcaca tgggtggaga tcttcgcccc ggagatccac tccaacggga
     1201 ttagcctgtg cgctgatgac ccgggtggct cgaccgcgca gttccagaac ctgcaactgt
     1261 ggcgctgcca cggctacgcc tccgatggca tcccgcagcg ctggcagttc tggatagcgg
     1321 gcaccaactc tgcggggccg acgtttcgga tcgacaacac tggcggctcg aactggtgca
     1381 ttgggctgga cgtgcgcatg actgctgcca ctccgtacgc ccagtgggcg ggcaagaaca
     1441 tagtccaaga atcctgcgcc atcgcaactg gcagccaggt ggtatggaac gtgctgccag
     1501 ccacccagtc accggacccg gataaccagg tcatgatcgt cagtacggac acacccgcgg
     1561 gccagcaacc gtactgcgtg gccgcgaaca ccttcctgga ccaaaacggc aaccggctga
     1621 tagacgagcc gtgcgatccg tacaactcat cgcagtggtt cgccttcacc tagcc
//
LOCUS       DASRPQ010000949         1338 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_426952, whole genome shotgun sequence.
ACCESSION   DASRPQ010000949 DASRPQ010000000
VERSION     DASRPQ010000949.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1338
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_426952"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            573..782
                     /locus_tag="VFD73_10800"
     CDS             573..782
                     /locus_tag="VFD73_10800"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZI74481.1"
                     /translation="MLVGYARVSTDDQDLTLQRTALKQAGCKRIYEEKVSGATRDRPA
                     LTRMLDQLREGPGHGLTGQVRLQAM"
     gene            complement(849..>1338)
                     /locus_tag="VFD73_10805"
     CDS             complement(849..>1338)
                     /locus_tag="VFD73_10805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI74482.1"
                     /translation="RIGQKNKITRRWAKRGTRPSAPKDQRTASAYIFGAICPAEGKGA
                     GLVLPRCTTQGMTLHLAEISQAVAPGAHALVLADQAGWHQSKRLVVPDNITLMPLPAK
                     APELNPVENIWQYMRENWISNRIFAAYSDILDHCCEAWNKLTDRPWLIMSIGLRDWAH
                     RF"
BASE COUNT          239 a          412 c          441 g          246 t
ORIGIN      
        1 ctgcgtaggc tgacgaaaaa cggggtctta tcggaccgat cgcacctcca acagctgcgg
       61 cgctttagcg gcgtctgacc gggagaacgc acgcggggtg cgccatggcc gggcacggct
      121 gaagccttcg gtggaagtgg ttcgatgaga cgcgctggat ggccgtccgc aggtatccgg
      181 agtcgcgggg gattcccgga gagcacagcc gttgataggc tgaagtgcca tgagccgcgg
      241 cggcgaacca tggcgcatgt ggcagatcat ctgagcttcg agaccctcac cgctctttgc
      301 accagcgagc cgtcaggctg ggcgctcgat gttgggactt gcggcgaggt tgcctcggag
      361 gtgccggagg gtcttccaca tgctgcaagc aggaacggaa atacagggct ccccgcgcga
      421 gctatagccg ccagaggaga tacttgggcg agagtatctc gaagccattc agctgtcccg
      481 ccacggacga tcctgcgtac gccagcgctg tcgcgaaact cctaaatttt gcgacaaatc
      541 tggccctctc gcttcctggc aggaccccgc ccgtgctcgt cggctatgcg cgcgtctcaa
      601 cagacgatca ggacctcacg ctccagcgca ctgcgctgaa gcaggccggg tgcaaacgca
      661 tctacgagga gaaggtctcg ggcgcgacgc gcgaccggcc cgcgttgacg cgcatgctcg
      721 accagctccg ggaaggtccc ggtcacggtc ttactggcca ggtccgcctt caggctatgt
      781 gacagggttc gacagctatt ccatcttgct tggccgcgac cgccacagct aataccaagt
      841 cccggtgatc agaacctatg ggcccagtct ctcaggccga tggacatgat gagccatggc
      901 cgatcggtga gcttgttcca cgcctcgcag cagtgatcga ggatgtcgct gtaagcggcg
      961 aagatccggt tcgagatcca gttctcgcgc atgtactgcc agatgttctc aaccgggttc
     1021 aactcgggtg ccttggccgg gagcggcatg agggtgatgt tgtcagggac cacaagtctc
     1081 ttcgactgat gccagcccgc ctggtccgcc aggacgaggg catgcgcgcc gggcgcaacc
     1141 gcctgtgaga tctcggctag gtgcaaggtc atgccctgcg tggtgcagcg gggcagaacc
     1201 aagcccgcgc ctttgccctc agccgggcag atcgccccga agatgtaagc tgacgccgtt
     1261 cgctggtcct tcggggcaga cgggcgggtg ccgcgtttgg cccagcgccg ggtgatcttg
     1321 ttcttctgcc cgatccgg
//
LOCUS       DASRPQ010000950         1023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1679212, whole genome shotgun sequence.
ACCESSION   DASRPQ010000950 DASRPQ010000000
VERSION     DASRPQ010000950.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1679212"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..212
                     /locus_tag="VFD73_10810"
     CDS             <1..212
                     /locus_tag="VFD73_10810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74483.1"
                     /translation="EVISAAFKAAGEQRKGSRPPRLRIARDHSHSVVELDLGLSRKTV
                     VVLRHEDLAAEGVVRHSLLGSKRRS"
     gene            417..>1023
                     /locus_tag="VFD73_10815"
     CDS             417..>1023
                     /locus_tag="VFD73_10815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74484.1"
                     /translation="MVWHEDFEAGSVPAVTARYNESQNPAGMALVADKPSASCGAASM
                     RLTSGGPASATDLYKKLLKPDGSGYDELYVRWYVKYQAGAPWHHTGVWFGGYNPPTDW
                     PNPQAGIRPVGDDRVSFGMEPVWGVSSPNPRFDFYDYWMTMHTCSSCGGAYWGNALVS
                     RNAFTADDDQWACVEVHAKLNTDLASAAGAELEVWKNDVLVQ"
BASE COUNT          187 a          313 c          347 g          176 t
ORIGIN      
        1 cggaggtgat ctcggctgcg ttcaaggcgg cgggcgaaca gcggaaggga tcccgccccc
       61 cccggttgcg catcgcccgg gaccacagcc attcggtagt ggagctcgac ctcgggctga
      121 gcagaaagac ggtcgtcgtg ctgcggcacg aagacctggc tgcagaaggc gtcgtcaggc
      181 attcgctgct gggatcgaag cggcgcagct aatgcccggg attggcgtga gtcctgtcac
      241 cgtcatccgg ggcagcctgg acgtaaagat tcgccatgac gcgttggtgt ggagtcatgg
      301 gagctgcgct gtggctcgca gcctgctcgg acttgaacag gccttcgagc ggcggcgggg
      361 gcggccttct agctgaccgc tacccctgtg atcaggggat cggcaatgat ccgcaggtgg
      421 tctggcacga agacttcgaa gcgggctcgg tgccggcagt aactgcgcgc tacaacgaat
      481 cccagaaccc ggccggcatg gcgctggtcg ccgacaagcc atcggcgagc tgtggtgccg
      541 cctcaatgag gctcacgtcc ggtggcccag ccagcgccac ggacctgtac aagaagcttc
      601 tcaaaccgga tggatccggc tacgacgagt tgtacgtgcg ctggtacgtc aagtatcagg
      661 ccggcgctcc gtggcaccac accggcgtct ggttcggcgg ctacaaccct cccactgact
      721 ggcccaaccc gcaggccggg atcaggcctg tcggagatga ccgagtctcc ttcggaatgg
      781 agccggtgtg gggcgtcagc tcaccaaatc cgcgcttcga tttctacgac tactggatga
      841 cgatgcacac gtgctcgagc tgcggcggcg cctactgggg caacgccctc gtgagccgaa
      901 atgcattcac tgcggatgac gaccaatggg cttgcgtcga ggtccacgcc aagctcaaca
      961 cggacttggc atcggcggcg ggggctgagc tcgaggtgtg gaagaatgat gtcctcgtcc
     1021 aac
//
LOCUS       DASRPQ010000951         5633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2305983, whole genome shotgun sequence.
ACCESSION   DASRPQ010000951 DASRPQ010000000
VERSION     DASRPQ010000951.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5633
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2305983"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..970)
                     /locus_tag="VFD73_10820"
     CDS             complement(<1..970)
                     /locus_tag="VFD73_10820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HZI74485.1"
                     /translation="MADDKGGRSRRPGSALAVDLRRARRARRDAQKVSVIPPVPVTHG
                     PTIDCADREPIACVREWFASEGWKPFPFQEEVWTAYLSGESGLIHAATGTGKTYAAWM
                     GPVMEWLRDYPAPRPAGDQLRRRAAAPPLRVLWITPLRALAADTEAALRAPIEDLGLP
                     WTVESRTGDTEPKVRARQSKRLPTTLVTTPESLSLLLTWTDTPALFEHLELVVVDEWH
                     ELMSSKRGVQTELALARLRQWRPQLRTWGLSATLGNLDTARDTLLGVGPDRHSRPGRI
                     IRGLVPKGLQIDSLIPETMERFPWSGQIGLRLLPEVIQAIEEGKTSL"
     gene            complement(1009..1830)
                     /locus_tag="VFD73_10825"
     CDS             complement(1009..1830)
                     /locus_tag="VFD73_10825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HZI74486.1"
                     /translation="MPNYICTTCGVQYAESVLPPEHCAICDDERQYVGWAGQTWTTLK
                     DLQRTHSNRLDVEAPELISLVTEPKFAIGQRALHVRTPEGNVLWDCITLVDDRSVAAV
                     QALGGVLAIAISHPHYYASVVEWSRALGDVPVYLHAADGEWLMRPHPAIVFWQGETHQ
                     LAPGLTLIRLGGHFPGASVLHWAGGAQGQGVVLSGDVLQVGQDRRTVSFMYSYPNYIP
                     VNAETVRRIVRALEPYPFEQVYGAWFGQNIKAGAKVAVGYSADRYIAAIADPSSH"
     gene            complement(1832..3460)
                     /locus_tag="VFD73_10830"
     CDS             complement(1832..3460)
                     /locus_tag="VFD73_10830"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016453714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HZI74487.1"
                     /translation="MRAFAELFAALDQTTGINEKIGALVRYFRSAPPADAAWAVHFLS
                     GRRPKRLVGSRKLAGWAAQEAGVQEWLFDESYHQVGDLAETITLILPDSGASSELPLS
                     FWVERLLGLRGEDEDVQREVVVGSWRELDRRERLVWNKLITGSFRVGASQRLVVRALS
                     QLSAVDEGVIAHRLMGSWEPTPEFFDRLTAPDTRDADASRPYPFFLAYPLEAEPAELG
                     ETSDWIAEWKWDGIRAQLVHRSDRTFLWSRGEELLDGRFPELEQAGALLPEGTVLDGE
                     VLPWVDGAPLPFAQLQRRIGRKNLGQAILDEVPAALIAYDLLEEHSVDLRPLPFDERR
                     RRLAALLETVPSSGRLLLSPEIRFESWEQLAQFRQQARNDGAEGIMLKRRSSSYGVGR
                     RRGDWWKWKVDPLTVDAVLIYAQPGSGKRAGLFTDYTFGIWEGQHLVPFAKAYSGLTD
                     EEIRQIDRFVRRNTLEKFGPVRTVKPELVFELHFEGIQPSTRHKSGIAVRFPRMARWR
                     TDKKAEEADTIETVRGLLRTSSPPSPPSPSSPSR"
     gene            complement(3457..4500)
                     /locus_tag="VFD73_10835"
     CDS             complement(3457..4500)
                     /locus_tag="VFD73_10835"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     exonuclease"
                     /protein_id="HZI74488.1"
                     /translation="MPLLTLTDRGLYCEAGDFYVDPWEPVDRAVITHAHGDHATWGAQ
                     AYLTAEPGVAVLRARLEPGARIRGVPYGETLRLNETTVSLHPAGHILGSSQVRIVHRG
                     EIWVVSGDYKTAPDPTCTPFESVRCHTFVTESTFGLPIYRWSPQTDVFDEINRWWREN
                     AAADKTSLLFGYSLGKAQRLIAGLDPGIGPILTHGAVERMTRAYRETGVELPPTIYAG
                     AADATGAIVVAPPFASGSPWLRRFAPYSTGFASGWMLVRGARRRRSLDRGFALSDHVD
                     WPSLLQAIEASGAGEVWVTHGFTGPVVRWLSERGVDARAVQTRFEGETDDEVSEATPT
                     GEAGAAVADGLLL"
     gene            complement(4549..5052)
                     /locus_tag="VFD73_10840"
     CDS             complement(4549..5052)
                     /locus_tag="VFD73_10840"
                     /inference="COORDINATES: protein motif:HMM:NF013340.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HZI74489.1"
                     /translation="MSATPPIKLSSGSFTHGSLIPVQHTCDGEDLSPPLSWSEVPLER
                     RSLALVCDDPDAPRGTWVHWVLYNLPAQSVELSAGVPTDPKLPSGACQGRNDSGEIGY
                     MGPCPPPGKPHRYYFRLYALDTLLSLPHGVSKAELEKAMEGHVLAQGTLMGTYQRDSG
                     AARQQGK"
     gene            complement(5057..5422)
                     /locus_tag="VFD73_10845"
     CDS             complement(5057..5422)
                     /locus_tag="VFD73_10845"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HZI74490.1"
                     /translation="MVPLFLAIGITAGILSGLFGIGGGILIIPALIFFAKFHTKLAIG
                     TSLGAMLLPVGLLGAYAYYQTGNVNIKASLLIGLGLFLGAYGGARLAQMLTGATLQRM
                     FAVLLVVMAVRLWIQAGRG"
BASE COUNT         1068 a         1809 c         1778 g          978 t
ORIGIN      
        1 cgagcgaggt cttgccctct tcgatcgcct gaatgacctc gggaagcaat cggagcccga
       61 tctgacccga ccagggaaac cgctccatgg tctcgggaat aagggaatcg atctggagtc
      121 ctttcggcac taacccgcga ataatccgcc ccggacgaga gtgtcggtcc gggccgacgc
      181 cgagcagggt gtcgcgggca gtgtccaggt ttcccaaggt ggcggacaga ccccaggtgc
      241 ggagctgtgg gcgccactgc cgcaggcgag ccagggccag ctcggtctga accccgcgct
      301 tggaggacat cagctcgtgc cactcgtcga ccacgacgag ctccaggtgc tcgaacagcg
      361 ctggtgtatc agtccaggtg aggaggagag acagactctc gggcgtcgtc accagggtcg
      421 tcggaagccg tttgctctgg cgggctcgga ccttgggctc ggtgtctccg gtacgcgact
      481 cgaccgtcca gggaagtccg agatcttcaa ttggagcgcg gagtgccgct tccgtgtccg
      541 ccgcaagtgc tctcagcggc gtgatccaca gaactcggag gggaggcgcc gccgcgcgcc
      601 ggcgcaactg gtctcctgct ggcctcggtg cgggatagtc cctcagccat tccatgaccg
      661 gtcccatcca ggctgcgtac gtcttcccgg ttcccgtcgc ggcgtggatc agtccgctct
      721 cgccggagag atatgctgtc cagacctctt cctgaaatgg aaagggcttc catccctcac
      781 tggcgaacca ctcgcggacg caggcgatcg gctcgcggtc agcacagtcg atggtcgggc
      841 cgtgggtgac tggtaccgga ggaatgacgc tgaccttctg ggcatcacgc ctggcgcggc
      901 gcgcccgccg aagatcaacc gccagtgccg atccaggcct cctcgatcgg ccccccttgt
      961 catcagccat acgggttcag cccgaagcct tggaatgatg cggaacggtc agtggctact
     1021 cgggtctgca atcgcagcga tataacgatc tgcggaataa cctacggcca ccttggcacc
     1081 ggccttgatg ttctggccaa accaggcccc atagacttgc tcgaagggat agggctcaag
     1141 ggctctcacg atccggcgaa cggtttccgc attcaccggg atgtagttcg gataactgta
     1201 catgaaactc accgttctgc gatcctgccc aacctggagc acgtctccgc tcagtacgac
     1261 cccctggccc tgagctccac ctgcccagtg cagcaccgat gctccaggga aatggccgcc
     1321 cagccggatc agcgtgaggc caggcgccaa ctggtgggtc tcaccctgcc aaaagacgat
     1381 cgcaggatgc ggtcgcatga gccattcgcc gtcggcggca tggagatata cgggcacatc
     1441 gcccaacgct cggctccact ctacgacgga ggcatagtag tgtgggtgcg agatcgcgat
     1501 agccagaacg ccgccaagcg cctggaccgc cgccacgctg cggtcatcta ccagagtaat
     1561 gcagtcccac aggacattcc cctccggtgt ccggacatgc agtgcacgtt ggccaatcgc
     1621 aaacttgggc tcagtcacca gactgatcag ctccggcgct tcgacatcca ggcgattcga
     1681 gtgggtcctc tggaggtcct tcagggtagt ccacgtctga cctgcccaac cgacatactg
     1741 ccgttcgtcg tcgcagatgg cgcagtgctc gggaggcaga accgattccg catattggac
     1801 cccgcaggtc gtgcagatgt agttgggcat gtcatctaga cggagaagac ggagagggcg
     1861 gagaaggcgg agaggacgtc ctgagaagcc ctcgcacagt ttcgatagta tccgcctctt
     1921 ccgccttctt gtcggtgcgc cagcgggcca tgcgcggaaa tcggacggcg atgccgctct
     1981 tgtgccgagt ggagggctga atgccttcga agtgaagctc gaagaccagc tcgggtttga
     2041 ctgtgcgtac cggcccaaac ttctccagcg tatttcgccg cacgaaccgg tcgatctgcc
     2101 tgatctcctc gtcggtgagg cccgagtagg ccttggcgaa gggaaccagg tgctgacctt
     2161 cccaaatacc gaaggtgtaa tcggtgaaca ggccggcccg cttgccgctg cccggctgag
     2221 cgtagatcag caccgcgtcc accgtcagcg gatcaacctt ccatttccac cagtcgccgc
     2281 ggcgccgccc gactccatac gacgaggagc ggcgtttgag catgattccc tctgctccgt
     2341 cgtttctcgc ctgctgccgg aactgggcaa gctgctccca gctctcgaat cggatctctg
     2401 gtgacagcag cagcctcccg gacgaaggta ccgtctcgag cagcgcagcg agccggcgac
     2461 gccgctcgtc gaaaggaagt ggacggaggt ccaccgagtg ctcttctaga aggtcgtagg
     2521 caatcagggc cgcaggcact tcgtcgagaa tggcttggcc caggtttttt cggccgatcc
     2581 ggcgctggag ctgggcaaag gggagcggag cgccgtcgac ccagggaaga acctcaccat
     2641 ccagcacagt gccttcgggc agcagcgctc ccgcctgctc cagctcgggg aagcggccgt
     2701 cgagcaattc ttcgccgcga ctccacagga aagtccggtc ggagcggtgc acgagctgcg
     2761 ccctgatccc atcccatttc cattcggcaa tccaatcgga ggtctcgccc agctcggctg
     2821 gttctgcttc caggggatac gccagaaaga aaggatacgg acggctcgcg tcggcatcgc
     2881 gggtatcggg cgctgtgagc cggtcgaaga attccggggt cggctcccag ctccccatga
     2941 gccgatgcgc gatcacgccc tcatccactg cgctcagctg gctgagcgcc cggaccacca
     3001 ggcgctgcga cgcccccacc cgaaaactgc cagtgatcaa cttgttccag accagtcgtt
     3061 cccttcggtc gagctcccgc caggagccga ccactacctc tcgctggaca tcctcgtctt
     3121 ccccgcgcag tccgaggagc cgctcaaccc agaatgacaa cggaagctcg ctggacgcac
     3181 cggagtcggg caggatcagg gttatcgtct ccgcaagatc gccgacctga tggtagctct
     3241 cgtcgaacaa ccattcctgc actcccgcct cttgggcggc ccagccagcg agtttccgtg
     3301 atcccaccaa ccgtttgggt ctccgccccg agaggaagtg cactgcccag gcggcatcgg
     3361 caggaggcgc gctgcggaag taccgcacca gggcgccgat cttctcattg atcccggtgg
     3421 tctggtccag ggcggcaaag agctctgcga acgctctcac aacagcaatc cgtccgctac
     3481 ggccgctcca gcctccccgg tcggggttgc ctcgctcacc tcgtcgtcgg tctcgccctc
     3541 gaaacgggtc tgcaccgccc gggcatctac gccacgctca gacagccagc gaaccaccgg
     3601 tccggtgaag ccgtgcgtta cccagacctc gccggctccg ctggcctcga tggcctgaag
     3661 cagactgggc cagtcaacgt ggtccgaaag tgcgaagccg cgatccagcg agcggcggcg
     3721 ccgagcaccc cgcaccagca tccacccgga agcaaagccg gtcgagtagg gagcaaaacg
     3781 ccgaagccaa ggcgatccgc tggcgaacgg tggtgcgacc acgatggcac cggtggcgtc
     3841 ggcagcgccg gcgtaaatgg tcggaggcaa ctccacgccg gtttcccggt acgccctggt
     3901 cattcgctcg acggcgccat gggtcagaat aggtccaatg ccaggatcca agccggcgat
     3961 gaggcgttgg gctttaccca gactgtagcc gaacagcaaa ctggtcttgt cggcggcggc
     4021 gttctcccgc caccagcggt tgatctcgtc gaaaacgtcg gtctggggag accagcgata
     4081 gatcggcagt ccgaaggtcg attcggtgac gaaggtgtgg caacgcaccg attcgaatgg
     4141 cgtgcaggtg ggatcggggg cggtcttgta atcgccggag actacccaaa tctcgccgcg
     4201 atgtacgatc cgaacctggg aagaaccgag aatatgcccg gcagggtgaa gcgagaccgt
     4261 cgtttcattc aggcgcagcg tttccccgta ggggactcca cgaatgcggg ctccaggctc
     4321 cagccgcgcc cgcagcacgg cgactcccgg ctcggcggtg aggtatgcct gggctcccca
     4381 ggtcgcgtga tcgccatggg cgtgggtgat gaccgcgcgg tccaccggct cccaagggtc
     4441 cacataaaaa tcgccggcct cgcagtagag gccgcgatcg gtaagggtca gcaggggcat
     4501 gatgaaaggt aagaccgcgg agccgcgggg agatcaggaa tgccagcttt acttgccttg
     4561 ctgccgcgcc gccccgctgt cccgctgata cgtgcccatc agtgtccctt gtgccagcac
     4621 gtgcccttcc atggcttttt cgagctcggc cttggagacg ccgtgcggaa ggctcagcag
     4681 cgtgtcgaga gcatagagcc ggaagtaata gcggtgcggt ttgccgggag gtggacaggg
     4741 gcccatgtag ccgatttccc cggaatcatt gcggccctgg cacgctccag agggaagctt
     4801 cgggtcggtt gggacgcccg cggagagctc gaccgattgc gcgggaagat tgtacagcac
     4861 ccaatggacc caggttcccc tcggtgcgtc gggatcgtcg cagacgagcg ccaggctccg
     4921 gcgctcgagt ggaacttcgc tccagctgag cggaggtgag aggtcctctc catcgcaggt
     4981 gtgctggacc gggatcaagg agccgtgagt gaaggacccc gaagaaagct tgattggagg
     5041 cgtggcagac atccgattac cctcttccgg cctgaatcca gagccggacg gccatgacga
     5101 cgagcaagac cgcaaacatc cgttgcaggg tcgcaccggt aagcatctgc gccaggcggg
     5161 ctccgccgta tgcccccaga aacagaccga gcccgatcag cagggaggcc ttgatattga
     5221 cgttcccggt ctggtaatag gcgtacgcgc caagcagtcc caccggcagc aacatcgccc
     5281 cgagcgacgt gccgatcgcc agcttggtgt ggaacttggc gaaaaaaatc aacgccggaa
     5341 tgatcaggat gccgcctccg atgccgaaga ggcccgagag gatgccggcc gtgataccga
     5401 tggcgagaaa gagtgggacc atggaccgga agatacatcc ccgctgaact cccgagtacg
     5461 ctgactcggc caacccgctt gtcctcccca tggggctgca tacaattcag gagtctgcac
     5521 cagcgccgcg gtctgcaggt cgacctcatc gagggaggag aacttcgtga agcgggtgac
     5581 tcccgttgtt ctcgctgcct ctgccttgct cgttgtgctg gatatcgtcg gtg
//
LOCUS       DASRPQ010000952         1505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4185687, whole genome shotgun sequence.
ACCESSION   DASRPQ010000952 DASRPQ010000000
VERSION     DASRPQ010000952.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4185687"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..783
                     /locus_tag="VFD73_10850"
     CDS             <1..783
                     /locus_tag="VFD73_10850"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0016018 - cyclosporin A binding [Evidence
                     IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HZI74491.1"
                     /translation="VAADALARAADPADLIPLTQMYTRSVRDSFPDASLSALGAIAAI
                     AKKGGAARDRVAREFLDKVPRPSNYLLRAWAETNWPDASTRWGSAYPIATGRTLQDYR
                     ELARQYLLAPDSIARPHVQIETQQQGVMEIELLGPDAPLTVANFLRLVDRRFFDGNRW
                     HRVVPDFVVQDGDPRGDGFGGPGGAIRDEINRNRYGNKPALGMALSGPDTGSSQWFIN
                     LSPQPHLDGTYTVFGSVVKDPGVLSRITQGDLIRTIRRVAGE"
     gene            780..>1505
                     /locus_tag="VFD73_10855"
     CDS             780..>1505
                     /locus_tag="VFD73_10855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74492.1"
                     /translation="MISIVAEHPKRLQAKLRRALVSSMALACTGMALNWVTPVSGHAQ
                     FFAFGQNKIQYRKLDWRIIRGPHVDLYYYPAEAELASAALAYAESSYDTLAIQFGHDV
                     GARVPLIVYASHTDFEQTNVLPFTPPEGLLGATDFLKRRVALPFRGNFAEFRHTMRHE
                     MVHVFQLDLQAESYYQAPRSGRFNFPLWWSEGLAELWSGGEDARDNMILRELTLSGRL
                     PSFQQLAPVTGAIVYPLGGKIHRW"
BASE COUNT          260 a          494 c          444 g          307 t
ORIGIN      
        1 gtcgctgccg acgcactggc ccgggcagcc gacccggctg acctcatccc tctgacccag
       61 atgtacaccc ggtcggttcg cgattccttc cccgatgcct cactctctgc gctcggggca
      121 atcgccgcca tcgccaagaa gggtggggct gcccgtgatc gcgtcgctcg cgaattcctc
      181 gacaaggtgc cgcgaccatc caattacctg ctgcgtgcct gggccgagac caactggcct
      241 gacgcctcca cccggtgggg ctcggcctac ccgattgcaa ccgggcgaac gctccaggac
      301 taccgtgagc tggcccgcca gtacctcctg gctcccgatt ccattgcccg gccgcacgta
      361 cagatcgaga ctcagcagca gggtgtcatg gagatcgagc tcctcggtcc ggatgcgccg
      421 ctcaccgtgg caaatttcct ccgcttggtg gatcgtcggt ttttcgacgg taatcggtgg
      481 catcgtgtcg ttcctgattt cgtggtgcag gatggggacc cgcgcggtga cggtttcgga
      541 ggcccgggag gagctatccg agacgagatc aaccgaaatc gctacggcaa caaaccggca
      601 ctcggtatgg ccttgtccgg tcctgatacc ggatccagcc agtggttcat caatctgtct
      661 ccccagcctc acctggatgg gacctatacc gtgttcggaa gtgtggtcaa agatccaggc
      721 gtcctgtctc gcatcaccca gggcgacctg attcgcacga ttcgtcgagt agcaggggag
      781 tgatctccat cgtggcggaa cacccaaaac gattgcaagc gaaactgcgg cgtgctctcg
      841 tgtccagcat ggcactcgcg tgcaccggca tggctctcaa ctgggtgacg cccgtctccg
      901 ggcatgccca gttcttcgca ttcggccaaa acaagattca gtatcgcaag ctcgactggc
      961 ggatcatccg cggcccgcac gtcgacctct actactatcc ggccgaggct gagctcgcct
     1021 ctgccgcttt ggcctacgcc gaatcgagct atgacaccct tgccattcag ttcgggcatg
     1081 atgtcggggc ccgggtgccg ttgatcgttt atgcctccca caccgatttc gaacaaacca
     1141 acgtcctgcc gttcactcct cccgaaggtc tcctcggggc caccgatttc ctgaaacgac
     1201 gggtggccct gccgtttcgg ggaaactttg ccgagtttcg ccataccatg cgccacgaga
     1261 tggtgcacgt gtttcaactc gatcttcagg ccgagagcta ctatcaggcg cctcggtcgg
     1321 ggcgcttcaa cttccctctg tggtggagtg aagggctggc ggagctgtgg tccggcggcg
     1381 aagacgcgcg cgacaacatg atcctccggg agctcaccct gagcgggcgg cttccttcgt
     1441 tccaacagct ggcgccggtg accggggcca ttgtgtatcc gctcggggga aagatccatc
     1501 gctgg
//
LOCUS       DASRPQ010000953         2237 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_114132, whole genome shotgun sequence.
ACCESSION   DASRPQ010000953 DASRPQ010000000
VERSION     DASRPQ010000953.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114132"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..681
                     /locus_tag="VFD73_10860"
     CDS             <1..681
                     /locus_tag="VFD73_10860"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HZI74493.1"
                     /translation="GLDLAQVAGIVLTHEHGDHACGTAGLARKLRAPILTAHGTWSRL
                     GGKHSTTEHRPLGLSNRVELGPFMVEGCPISHDAFDPLAVAVRIPDGTSIGVAYDLGR
                     VTTAVRYLLRNLTGIVLESNHDEVQLRTSEYPPVVQRRIAGSGGHLSNRAAAQLLREL
                     HHPGLAVVVLAHLSQQCNSAADARAAVAPALRRAGFRGTLHVADQDRPLPPIMVSQAD
                     GAQLTLGL"
     gene            complement(791..1408)
                     /locus_tag="VFD73_10865"
     CDS             complement(791..1408)
                     /locus_tag="VFD73_10865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74494.1"
                     /translation="MSHVCAVSGACASLAALALFTTPLFAQRVSLSPTIGVYIPTTEL
                     VKAANGQEFKQEIALAVGGRLGLNFTPRLGLVTSVTYVPSDLKFNLNGQTQSKDKANL
                     LFGTARATYYVLPTSAPVWLNINAGGSLVRRSGEAFDSLKDKTDLGGVVGTAVGLNLG
                     GFLSFYVAADDYIYGTTFVDASSLEEKKTQNDVQLSVGFGVPLNR"
     gene            complement(1533..2069)
                     /locus_tag="VFD73_10870"
     CDS             complement(1533..2069)
                     /locus_tag="VFD73_10870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74495.1"
                     /translation="MSRPPAHRATDPMAGVVDRLLAQLPGLQGYSEEYRPSGTLRNGT
                     STVVVGSASPGAQHGPAQVLGMWVRVLLGLSLAITIDWWPYSRTCGFPLLGYLLAVVC
                     VFLAGTWAAAASWRQRGALAHVISLTLILYAVILAGSELLPRTGYAVQQATWMCDDLL
                     SSPTMVLSQDPSSRHVSY"
BASE COUNT          450 a          680 c          692 g          415 t
ORIGIN      
        1 ggtctcgacc tcgcgcaggt ggccggcatt gtgctcaccc acgagcacgg cgatcacgcc
       61 tgcggaacgg cagggctggc ccgaaagctc cgggcaccga ttctgaccgc gcatggaacg
      121 tggagccggc tgggcgggaa acacagcacc acggagcacc gtccattagg tctctccaat
      181 cgggtcgagc tggggccgtt catggtcgag gggtgtccga tcagtcacga cgctttcgat
      241 ccgctggcgg tcgcggtgcg aattcccgat gggacgagca ttggagtcgc ctatgacctc
      301 ggccgggtga ccacggcagt ccgctacctg ctccgcaatc tgaccggcat cgtgctggag
      361 tcgaatcatg atgaagtgca gctgcgcacc agtgaatatc caccagttgt ccagcgccgg
      421 atcgccggtt ccggagggca cctttcaaat cgggccgcag cgcagctcct gcgggaactg
      481 catcaccctg ggctcgcggt ggtggtattg gcccatctga gtcagcaatg caacagcgcc
      541 gccgacgcgc gagcagccgt agctccggca ctccgccgcg cagggttccg gggaaccttg
      601 catgttgccg atcaagatcg tcccctgccc ccgattatgg tgagccaggc tgatggagcc
      661 cagctcaccc tgggactgta gcggtgtcag atctgaaccg gtaatagtca ggcgccatac
      721 ttcttcgtga tttcgagctg ctgcggaacc ccaatcgctt cccggcgctg aggcggttag
      781 ccgagcgaag ctagcgattg agcggcaccc cgaatcctac cgagagctgt acgtcgttct
      841 gggtcttctt ttcttccagg ctcgaagcat cgacgaacgt ggtaccatag atgtaatcat
      901 cggccgcgac gtagaagctc aaaaagcccc cgagattcaa tcctacggcc gttcccacca
      961 cgccacccag atcggtcttg tctttgagtg aatcgaaggc ttccccacta cgcctcacca
     1021 ggctgcctcc ggcattgatg ttgagccaga ccggcgcgct ggtgggcagg acgtagtagg
     1081 tggctcgcgc ggtgccgaac agaaggttgg ccttgtcctt actctgggtt tgaccgttca
     1141 gattgaactt gagatcactc ggtacgtacg tcaccgacgt cacgagtccc agtcgtgggg
     1201 tgaagttcaa gccgaggcgc ccccccactg ctagcgcgat ctcctgtttg aattcctgcc
     1261 cgttggctgc cttcaccagt tcggtggttg ggatatacac gccgattgtg ggcgagaggg
     1321 acactcgctg ggcaaacagg ggagtggtga acaacgcgag cgccgcgagt gacgcgcacg
     1381 ctccagacac cgcacatacg tgggacatgc ctcctcctca tttggctgat gttcttgaac
     1441 ccctgtgtca aagactcagg ggctgcccag tgttcttgct taccgacgct gacggagctg
     1501 tgaagccaat ctatggctgg ggcgtgggtg ggctagtagc tgacgtgccg ggaggaggga
     1561 tcctggctca ataccattgt tggagaggat agcagatcat cgcacatcca ggtggcttgc
     1621 tgcactgcgt agcccgttcg aggcaggagc tccgaaccag ccaggatcac tgcatagagt
     1681 atcagcgtca gggagatgac atgggccaag gcgccgcgct gcctccacga agctgccgca
     1741 gcccaagtac ccgccaaaaa aacacagacc accgctagga gatagcccag gaggggaaag
     1801 ccgcacgtac gggagtacgg ccaccagtcg atggtgattg ccagactcaa cccgagcaga
     1861 actcgcaccc acattccgag cacttgagcc gggccatgct gcgcgccggg gctcgcactt
     1921 cccaccacca ccgtggaggt cccgttccga agggtaccag agggccgata ctcctcggaa
     1981 tagccctgca gccccggcaa ttgcgcgaga aggcgatcga ccactcccgc catgggatcg
     2041 gtagcgcggt gagctggagg tctcgacatg ctaccccgct ttgaagggca gagaacagag
     2101 agggctggag atggcggaag gcatttgtcg taccaccagc aggctcagcg aaacgccggc
     2161 tatcagagca attgccagcg aatagctgcg atgttctgca gccgcattca tccattgcag
     2221 tcagatacag tggggcg
//
LOCUS       DASRPQ010000954         1244 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2933778, whole genome shotgun sequence.
ACCESSION   DASRPQ010000954 DASRPQ010000000
VERSION     DASRPQ010000954.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2933778"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(92..598)
                     /gene="bfr"
                     /locus_tag="VFD73_10875"
     CDS             complement(92..598)
                     /gene="bfr"
                     /locus_tag="VFD73_10875"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HZI74496.1"
                     /translation="MPHGTVIGMQGDPTVIEFLNEQLTAELTAINQYFLHAKMQENWG
                     YTKLAAHTRYESIDEMKHAEVLTDRILFLEGLPNFQKLFPLRIGETVKEQFQADMKIE
                     AEAIDRLRRGIAHMRTVGDVTSAKIFEDILKDEEHHIDYLETQLHLMETLGEALYLQN
                     VTEHPKED"
     gene            complement(633..809)
                     /locus_tag="VFD73_10880"
     CDS             complement(633..809)
                     /locus_tag="VFD73_10880"
                     /inference="COORDINATES: protein motif:HMM:NF016230.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HZI74497.1"
                     /translation="MFVCICARVRECEVRSVIALGARTEDAVGDACGAGTHCGTCLDR
                     IEELLTEKEPVRVG"
     gene            complement(887..>1244)
                     /locus_tag="VFD73_10885"
     CDS             complement(887..>1244)
                     /locus_tag="VFD73_10885"
                     /inference="COORDINATES: protein motif:HMM:NF015522.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74498.1"
                     /translation="SIENRSSSKGSSEKRSGEKRSSNNGSTTLLPRTRLQPDTRHRFM
                     INGQDNTEAIRLDIFPDGGMARLRLWGRLGPAAADRLTRRWIEALPPAEAARVLAENG
                     RSVDALVSEVTHMWTK"
BASE COUNT          174 a          402 c          410 g          258 t
ORIGIN      
        1 gcgccggtcc ccccgtattg gcctctgttt gcacctccgc cccgccccca ggagctggcg
       61 ggggcggggc gggggcagag cggagccggg ttcagtcttc cttcgggtgc tccgtgacgt
      121 tctggaggta cagcgcctcg cccagcgtct ccatgaggtg cagctgggtc tccaggtagt
      181 cgatgtggtg ctcctcgtcc ttgaggatgt cctcgaagat cttcgcggag gtcacgtcgc
      241 cgaccgtgcg catgtgggcg atgccccgcc gcagccggtc gatcgcctcg gcctcgatct
      301 tcatgtcggc ctggaactgc tccttgaccg tctcgccgat gcgcagcggg aagagcttct
      361 ggaagttcgg cagcccttcc aggaagagga tgcggtcggt gagcacctcg gcgtgcttca
      421 tctcgtcgat ggactcgtac cgggtgtggg ccgcaagctt ggtgtagccc cagttctcct
      481 gcatcttggc gtgcaggaag tactggttga tcgcggtgag ctcggccgtg agctgctcgt
      541 tcagaaactc gatgactgtg gggtcgccct gcatgccgat cacggtaccg tggggcatat
      601 gtccgaatct tgtcagccgg acctaacctt ggtcagccaa ccctaacggg ctccttctcg
      661 gtgaggagct cctcgatccg gtcgaggcag gtgccgcagt gggtgccggc cccgcacgcg
      721 tcgccgaccg cgtcttcggt gcgcgcaccc agggcgatca cagagcgaac ctcacactcc
      781 cgaacccggg cacagataca cacgaacacg gaccactccc tgcgcttagc ctaacctaag
      841 ttagggtagc cacaggagat ggccggagcg caagagccgg tgggatttac ttcgtccaca
      901 tgtgagtgac ctcgctgacc agcgcatcca ccgacctgcc gttttcggcg aggacccggg
      961 cggcctccgc cggcggaagc gcctcgatcc agcgccgggt gagccggtcg gccgctgcgg
     1021 ggccgagccg tccccagagc cggaggcggg ccatccctcc gtccggaaag atatccagcc
     1081 ggattgcttc tgtgttgtcc tgtccgttga tcatgaaccg gtggcgggtg tcgggttgga
     1141 ggcgggtccg cgggaggagg gttgtgctcc cgttgttgct gctcctcttt tcgccgctcc
     1201 tcttttcgct gctccctttg ctgctgctcc tgttttcgat gctg
//
LOCUS       DASRPQ010000955         1009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4513803, whole genome shotgun sequence.
ACCESSION   DASRPQ010000955 DASRPQ010000000
VERSION     DASRPQ010000955.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4513803"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..911
                     /locus_tag="VFD73_10890"
     CDS             <1..911
                     /locus_tag="VFD73_10890"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HZI74499.1"
                     /translation="CYVAALGTILLYIREGHSLHRFAAGGSDPNDLAMTMVLGFPMAW
                     YLGMTHERPLVRWIARIYLPIGLFATVLTGSRGGMLTTMVSLTIVPLTLARLTPGKRS
                     LAVALLLISGVLAVAFVPSTVVARLETTTTTVEDLSIGGRFKLWVAGLRAFLARPVMG
                     YGPGAYKPAITPQLGALAQVAHNSYISVLVEQGLVGFVLYYTMVATVWYAVLKLPLLE
                     RRFSLVLLSTLAIAMAPLTWEDHKNVWYILAVLLGLTRAFAFEGPGTYRSRLVQPAAP
                     PRPRARPPVRPLARPAALNPERDARA"
BASE COUNT          151 a          317 c          330 g          211 t
ORIGIN      
        1 gctgctatgt cgcggcactg ggaaccatcc tgttgtatat ccgagaaggc cactcgctgc
       61 accgcttcgc ggccggcggg tcggacccga acgatctcgc gatgaccatg gtgctcgggt
      121 tcccgatggc gtggtacctg ggaatgacgc acgaacgccc attggtgcgg tggatcgcgc
      181 ggatctacct gccgatcggg ctgttcgcga cggtgctgac cgggtcgcgg gggggcatgc
      241 tgaccacgat ggtgtcactc acgattgtgc ctttgacgtt ggcgcggctc actcccggga
      301 agcgcagtct ggcggtcgcg ctcctgctga tctccggtgt gctggccgtt gcgtttgtgc
      361 cgagcacagt cgtggcaaga ctggagacga cgacgacgac ggtggaggac ctgagcatcg
      421 gtggtcggtt caagctctgg gtagcgggac tgcgcgcctt cctggctcga ccggtgatgg
      481 ggtatggccc gggcgcgtac aagccggcca ttactccgca actgggagcg ctggcccaag
      541 tcgcgcataa ctcctacatc tccgttctgg tcgagcaggg gcttgtggga ttcgtgctct
      601 actacaccat ggtggcgacg gtctggtatg cagtgctcaa gcttcccctg ctggagcgac
      661 gattctctct ggtgctgctc tccacgcttg ccatagcgat ggcgccgctt acctgggagg
      721 accacaagaa cgtctggtac atccttgcgg tgttgctggg acttacccga gcatttgcct
      781 tcgagggtcc gggtacctac cgctctcgcc tggtccaacc cgccgcgccg cctcgtcctc
      841 gggcgaggcc gccggtccga ccgctggcac gcccagccgc cctcaatcct gaacgcgatg
      901 cccgggcatg acgcccaggg tgagcgtcgt cagcaccgtt tttaacggtg agccgtactt
      961 cgatcgcgcc attcccggga ttctgactca gaccttcgac gatttcgag
//
LOCUS       DASRPQ010000956         1357 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_743564, whole genome shotgun sequence.
ACCESSION   DASRPQ010000956 DASRPQ010000000
VERSION     DASRPQ010000956.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1357
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_743564"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..209
                     /locus_tag="VFD73_10895"
     CDS             <1..209
                     /locus_tag="VFD73_10895"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HZI74500.1"
                     /translation="MDSMNWIALASLTGLPATAAPIGKTPSGLPVGLQVVGPMWEDAT
                     PITLAGLISQETCGGFTPPPDFRS"
     gene            699..1175
                     /locus_tag="VFD73_10900"
     CDS             699..1175
                     /locus_tag="VFD73_10900"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HZI74501.1"
                     /translation="MNRAEAALLLRLKALAGDSEPEVTGACFSGILSVEGPTALPFVS
                     PFLASADPDVVAEAALALGLARLPDAVSLIVDRYRIERDASLASVLLTALAVSHQDAA
                     GSFLLSIVESDGATKAAAAIEAVVSAGGLTEEMRAKFAAAAKRNSDPKVASAAGRL"
BASE COUNT          272 a          434 c          412 g          239 t
ORIGIN      
        1 acatggactc catgaactgg atagctctcg cctccctcac gggccttccc gcaacagcag
       61 ccccgatcgg gaagacccca tccggacttc cggttggatt acaggtggtc gggccgatgt
      121 gggaagacgc gacaccgatc acgcttgccg gtctgatctc acaggaaacg tgcggcggtt
      181 tcactccacc gcctgacttt cgctcgtgaa gaaattcgat gcgcaactcg cacgcatcga
      241 agcgctgcgg gatgagccag tcacaccagc ggtaatcacg gaactacgca gggcaatcgg
      301 cagcaaaagt ggctacctcg caggcaaagc tgcggcggta gcctcgcgtc accggctcac
      361 agccttggtc cctgacctgg taagcgcctt cgatcggttc atgctggagc cggtcaaagc
      421 agatccgcag tgctggggca agaacggcat cgtcacggcc ctcgcggaat taggacacga
      481 tagccccgat gtatatctcc gcggactcgc gcacattcag ctcgaacccg tctggggagg
      541 caccgaggac actgccggaa ccctgaggag tcgaagcgcc cacgccctcg tcgagtgtcg
      601 gtcgctgtcc gacacggacc tgctgcggca tctgctctgt ctgctcatcg acaaagaaac
      661 tggagttcgc gtagccggtg tgcaggcaaa ttgcaagagt gaaccgagcc gaagcggccc
      721 tgctgctcag gctcaaggcc ctggccgggg acagcgagcc ggaagttacg ggtgcgtgct
      781 tcagcggaat cctgtcggtc gaaggtccca cagctctgcc cttcgtgtcg ccgtttctgg
      841 cgtccgcgga cccggacgta gtcgccgaag cagcactggc actgggcctc gccagactcc
      901 ccgacgctgt atcactgatt gtggatcgct atcgcatcga gcgcgacgct tcactggcgt
      961 cagtgctgct gacggctctc gcggtctcac accaggatgc cgccggcagt ttcctgctct
     1021 caatagtcga atccgacgga gccaccaaag ccgcggcggc aatcgaagcg gtagtctcgg
     1081 ccggcggtct taccgaggaa atgcgtgcaa agttcgctgc agcggcgaag cgcaactcag
     1141 accccaaagt ggcctccgcc gccgggagac tgtaagccgc aaaggttatc ccagcagctg
     1201 cgaagggacg ctattccgta acatcgttcg cgacgtggct gagcatagtc cgcgagtacc
     1261 caagtgtaag gtcggccgat gccggctgca cgcactccca acgcgagtgc cttgaagatg
     1321 ttagaccctt cggcagggtg tcaacggtcc cgcgacc
//
LOCUS       DASRPQ010000957         1255 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3560855, whole genome shotgun sequence.
ACCESSION   DASRPQ010000957 DASRPQ010000000
VERSION     DASRPQ010000957.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3560855"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..977)
                     /locus_tag="VFD73_10905"
     CDS             complement(<1..977)
                     /locus_tag="VFD73_10905"
                     /inference="COORDINATES: protein motif:HMM:TIGR01499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HZI74502.1"
                     /translation="MSSYETAIARMNALGHELAQAPSHKFDLAHMRVLLAALDSPERH
                     FPSVLIAGTNGKGSTAATLASILQASGLRTGLYTSPHLVRINERIQIDGQQIGDDDFA
                     LVHDLVDRIAERLVSEGELPWHPSFFEMLTAIAFEHFARRKLDIAVLEVGMGGRLVAT
                     NVVDPRVSVITDISLDHQKYLGNTVAEIAAEKAGIIRPGVVVVTLPQQPQANDVIGNT
                     ILERGARAVNAVPYVPPVSPASAQYLAAGNQTSLVSRYPLQVMGEQILVETPLIGRHQ
                     LRNVALAIAAAEELGGQGFPVTAGSIERGVRETHWPGRFQVLAAVASEP"
BASE COUNT          252 a          409 c          367 g          227 t
ORIGIN      
        1 tcgggctcgc tggcgacggc ggccagcacc tggaaacgcc ccggccaatg ggtttcgcga
       61 actccccgct cgatcgagcc ggccgtcaca gggaaccctt gcccacccag ttcctcggcg
      121 gccgcaatag ccagagcgac attccgcaac tggtggcgcc cgatcagagg agtttcgacc
      181 agaatctgct ctcccatcac ctgcagcgga taacgcgaaa ccagactcgt ctgattaccg
      241 gccgccaggt attgtgcgct ggccggactt acgggcggaa catatggcac cgcattcacc
      301 gcccgcgcgc cccgctccag aatcgtgttt ccgatcacgt cgttggcctg gggctgctgg
      361 ggcagagtga ccactacgac gcccggacgg atgattcccg ccttctcagc cgcgatctca
      421 gctaccgtgt tgcccagata tttctgatgg tcgagcgaga tatcggtgat cacgctgact
      481 ctcgggtcca ccacgttggt ggcaaccagc cgtccgccca tgccgacctc gagcaccgcg
      541 atgtccagct tccggcgcgc gaagtgttcg aaggcaatcg ccgtgagcat ctcgaaaaag
      601 ctgggatgcc agggcaactc gccctcgctg accaggcgct cggcaatacg gtccaccagg
      661 tcgtggacca gggcaaaatc gtcgtcgccg atctgctgcc catcgatctg tatgcgctca
      721 ttgatccgta ccaggtgggg cgaggtataa agcccggtcc gtagccccga agcctgcagg
      781 atcgaagcca gggtggccgc ggtcgatcct ttgccgttag tccccgcaat cagcacactg
      841 gggaaatgcc gctcaggact atccagcgcg gccagcaaca cgcgcatgtg cgccagatcg
      901 aacttgtgcg agggcgcctg cgccagttca tggcccaatg cgttcatgcg cgcgatggca
      961 gtttcgtagg aagacatcag tcgtcagtcg tcggtcgtct aaaactaggg taccagcttc
     1021 cactttgagc tttcgaggcc agaccgtcga atcgtcgagc tgggggccga gcaggggaag
     1081 caggcagctc gtggagtaac tgacaaccgg gaactgaaga ctggccactg acgtcttatg
     1141 ccgacgtctg acgactgacg accgacgact gatctccaga cgcctgatcc ataaattcca
     1201 acgcccgcga aatatacgac ttcagctgcc gccggtgcac caccgcatcc agcat
//
LOCUS       DASRPQ010000958         1220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_429078, whole genome shotgun sequence.
ACCESSION   DASRPQ010000958 DASRPQ010000000
VERSION     DASRPQ010000958.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429078"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..359
                     /locus_tag="VFD73_10910"
     CDS             <1..359
                     /locus_tag="VFD73_10910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74503.1"
                     /translation="LHQNLWLKAIEELQADGLETTAAPNALFDEEYAEHATSVWHLSD
                     GTHGQDGGWASGLQPDGTHEFDYLVDAQPLGDVASAPAPDPKLYATYNGAMGKPSGPA
                     LGTETGLTGKIKDKLT"
     gene            complement(356..526)
                     /locus_tag="VFD73_10915"
     CDS             complement(356..526)
                     /locus_tag="VFD73_10915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74504.1"
                     /translation="MRKPYGLADTAAACDQQWAGHALIAWHVPDWTIKQAAAKCRVED
                     LGNLGDRAGAMA"
     gene            566..1132
                     /locus_tag="VFD73_10920"
     CDS             566..1132
                     /locus_tag="VFD73_10920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74505.1"
                     /translation="MNPPPEIKTPQEELLGTTTGIIVTAIVACLGLGALLFPVFWAAR
                     PPKERLLGKTDDGAQIGDPDSIMPSQGNSHGQWPSERLEDRHVPEGGHPHGKLSSWIL
                     VTVVTAAFITGGVAIITHIWWLFWACIGIAVLAIPAGKAIGIMDDTVAWGSNPAAYDP
                     PQDHQAGAQPDQQTTLGPGSVHNRFEPP"
BASE COUNT          249 a          421 c          354 g          196 t
ORIGIN      
        1 ccttgcacca gaacctgtgg ctcaaggcca tcgaggaact gcaggccgac ggcctggaga
       61 ccacggccgc gccaaacgcg ctgttcgatg aggaatacgc cgagcacgcc acctcggtct
      121 ggcacctatc cgacggcacc cacggccagg acggcggctg ggcatctggg ctgcagccag
      181 acggaacgca cgagttcgac tacctcgttg atgcccagcc gctcggcgac gtggcctccg
      241 ccccggctcc ggacccgaaa ctgtatgcca cctacaacgg cgccatgggc aagccctccg
      301 gtccggcgct gggcaccgag accggcctca ccggcaagat caaggacaag ctgacctaag
      361 ccatcgcacc agcccgatcg cccagattgc ccaggtcttc aacccgacac ttggccgccg
      421 cctgcttgat ggtccagtcc ggcacgtgcc aggcgatcag agcgtgccca gcccactgct
      481 gatcacaggc agcggccgta tcggcaagac catacggctt ccgcaaatgc ttcgcgggta
      541 gtgcagccga caggagactt gcaacgtgaa cccaccaccc gaaatcaaaa cgccgcagga
      601 agagcttctt ggaaccacga ccgggataat cgttacagca attgtcgcct gcctaggcct
      661 cggcgcattg ctcttcccgg tgttctgggc agccaggccc ccgaaagaac gcctcttggg
      721 aaagaccgat gatggtgcgc aaatcgggga cccggatagc atcatgccat cccaaggtaa
      781 cagccatggg cagtggcctt cggagcggct tgaggatcgg cacgttcccg agggaggtca
      841 tcctcatggc aagctctcct cttggattct cgtcaccgtc gtgacggcag ccttcatcac
      901 tggcggagta gcgatcatca cacacatctg gtggctcttc tgggcctgca tcggaatcgc
      961 cgtgctcgcc atccccgcag gcaaggcaat cggcatcatg gatgacaccg tcgcctgggg
     1021 cagcaatcca gcggcctacg atccacccca agaccatcag gctggcgctc agcctgacca
     1081 gcagactacg ctcggtcccg gaagcgtaca taaccgtttt gaaccgccgt aatctcgacg
     1141 cggccccgtg ccctgtgccg ttgcgtgccg cggcggctaa ttggccacgc tggccaatcg
     1201 ccgccgagga tcaggcaaag
//
LOCUS       DASRPQ010000959         2721 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4186675, whole genome shotgun sequence.
ACCESSION   DASRPQ010000959 DASRPQ010000000
VERSION     DASRPQ010000959.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2721
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4186675"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..539
                     /locus_tag="VFD73_10925"
     CDS             <1..539
                     /locus_tag="VFD73_10925"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HZI74506.1"
                     /translation="SGDDVARAFRHVGQPEIYGTVTLGLVAAGLVAGDNELTRAGGRL
                     AATLLLAGATTTAGKVALGRPRPSESLDADGYSPFSGQDAMPSGHTTMAFALATALSD
                     DIGNPWASAGLYTVATGVGWSRINDNRHWLTDVATGALIGITSAKLMDGHWRLFNVHP
                     PRVLLGGDRAQLAWQITF"
     gene            547..1533
                     /locus_tag="VFD73_10930"
     CDS             547..1533
                     /locus_tag="VFD73_10930"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HZI74507.1"
                     /translation="MKSFSPAACSAEVSRRLTHRVTAAVVVFSALGGPLKAQEKFAGP
                     IVVFNAGSLAKPFSDLLQAFKARYPAVVPAQENSGSVEAARKLTELGKIPDVLGVADY
                     GVIAKLLIPKYAGWYATFARNAMVLIYTDQSTGAREINKQNWWQVLLRPGVRAGHSDP
                     ALDPNGYRTLMVFQLAEKFYRQPGLADRLNRAIPARYIRPKEADLTALVQAGELDYSW
                     SYLSIARTAGLRHLDLPPEINLSDPKLADWYAQALVRIPRTGGQDSLEVRGEPIVYAL
                     TIPREAPHPETAAGFVRFALSHEGRSILEAAGFTLLPRPRLAGPEKPSTSLF"
     gene            1568..>2721
                     /locus_tag="VFD73_10935"
     CDS             1568..>2721
                     /locus_tag="VFD73_10935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HZI74508.1"
                     /translation="MSGTSNIPSPRNEPVLSYGPESPERAALKSALTAVTARQADIPA
                     VVGGREIRSGVTQDVVSPHCHGRVLARAHQADRATIDAAVKAAVEAQRDWGHWRFEDR
                     AAVFLRAAELLATTHRQLLNAATMLGQSKTAYQAEIDSACELIDFLRFNVHYADRIYQ
                     EQPESAPGVWNRLDHRPLEGFVYAITPFNFTAIAGNLPTAPALMGNAVVWKPAATAML
                     SNWYIYKLLEEAGLPPGVINFLPGDPIEVSDILLSSRELAGLHFTGSTAVFQALWQTI
                     AGNLHRYAGYPRIVGETGGKDFILAHPSADVDALAVAMVRGAYEYQGQKCSAASRAYI
                     PDSLWPAVRDRVVGMIEDIRMGDVADFRNFMGAVIDRRAFTRLKQHLDAA"
BASE COUNT          491 a          882 c          844 g          504 t
ORIGIN      
        1 ccagcggaga cgatgtggct cgagccttcc gtcatgtcgg tcaaccggag atctatggca
       61 ccgtgaccct cggcttggtc gccgcgggat tggtggcagg agacaatgag ttgacccgtg
      121 cgggcggccg gctcgcggcc actctgcttt tggccggtgc cacgactact gcgggcaagg
      181 tggcgctcgg gcggccgcgc cccagcgaga gcctggatgc cgacggctat tcccccttct
      241 cgggtcagga tgccatgccc tcgggacaca ccaccatggc gtttgccctg gccaccgcgc
      301 tttccgatga tatcggaaat ccctgggcca gcgctggact ctacacggtg gcaaccggcg
      361 tcggttggtc gcgcatcaat gacaaccgtc actggctcac cgatgtggcc accggagccc
      421 tcattgggat tacctcagcc aagctcatgg acgggcattg gcggttgttc aacgtgcatc
      481 caccacgtgt cctgctcggg ggcgatcggg cgcagctcgc ctggcagata acgttctgac
      541 ggcgtgatga agtcattctc tccagctgcc tgcagcgccg aggtatcccg ccggctcacc
      601 catcgcgtca cagcagcagt cgtcgttttc tccgccttgg gaggtccgct gaaggctcag
      661 gagaaattcg cgggcccaat tgtcgttttt aatgccggga gcctggccaa gccattcagc
      721 gatctgcttc aggcgttcaa ggccagatac cccgccgttg ttccggcgca ggaaaattcc
      781 ggcagcgttg aagcggcccg taagctgact gagctcggca aaattccgga cgtgctcggg
      841 gtggcggact atggcgtcat cgcgaaactg ctcattccca agtacgccgg ctggtacgca
      901 acgttcgccc gaaatgcgat ggtgctgatc tataccgacc agtcaaccgg cgcccgggag
      961 atcaacaagc aaaactggtg gcaggtgctc ctcaggccgg gtgtacgcgc ggggcactcg
     1021 gacccggcac tcgaccccaa cggataccgg acgttgatgg tgttccagct cgccgaaaag
     1081 ttctaccgcc agcctggtct ggctgatcgg ctcaaccgcg cgattcccgc gcgctacatc
     1141 agaccgaagg aggccgatct gacggcgctg gtgcaggctg gcgagctgga ttattcctgg
     1201 tcctatttgt cgatcgccag gacggcaggc ctgcgtcacc tggacctccc ccccgagatc
     1261 aacctcagcg atccgaaact ggcagattgg tacgctcagg cgctggtccg gatacccagg
     1321 acgggcgggc aagactctct ggaggttcgc ggtgagccaa tcgtctacgc gctcacgatc
     1381 cctcgagagg cgccgcatcc cgaaaccgct gccggcttcg tgcgcttcgc cttgtcgcac
     1441 gaggggcgtt cgatccttga ggcggcggga ttcaccctgc taccccgacc gcggctagca
     1501 gggccggaaa agccgtcgac ctcgctgttc tgattatctt caccgaacct cctgcttcgg
     1561 tgaagtgatg agcggtacgt caaacatccc atccccccgc aacgagccgg tcctgagtta
     1621 cggtccggaa tcccctgaaa gagcggctct caagtctgca ctgacggccg tgaccgcccg
     1681 ccaggccgat atccccgccg tggttggcgg gcgagagatt cgctccggcg tcactcagga
     1741 tgttgtctca ccacattgtc atggccgagt gctggcgcgg gcgcatcagg cggaccgcgc
     1801 aacgatcgat gcggccgtca aagctgcggt cgaggcgcag cgcgactggg gacactggcg
     1861 cttcgaggac cgggccgcgg ttttcctacg ggcggctgag cttcttgcca ccacccaccg
     1921 gcaactgctg aatgcggcaa cgatgctggg gcaaagcaag acggcgtacc aggcagagat
     1981 cgacagcgcc tgcgaactga tcgacttcct ccgcttcaac gtccactacg ccgatcggat
     2041 ctaccaggaa cagcccgaat ctgctcccgg cgtctggaat cgactggacc atcgtccact
     2101 cgaaggattc gtgtacgcca tcactccctt taacttcacg gccatcgcgg gcaacctgcc
     2161 taccgcgccc gccctcatgg gcaacgcggt tgtctggaag ccggctgcca ccgcgatgct
     2221 cagcaactgg tacatctaca agcttctgga ggaggccggg ctccctccgg gggtgatcaa
     2281 cttcctgccg ggcgatccaa tcgaggtcag tgatatcctg ctctccagcc gggagcttgc
     2341 cgggctgcat ttcaccggat cgacggcggt gtttcaggcg ctctggcaaa ccatcgccgg
     2401 caatttgcac cggtatgccg ggtatccccg catcgtggga gagacgggag gaaaggactt
     2461 catcctcgcc cacccgagcg ccgatgtgga cgcgctggca gttgcgatgg tgcgcggcgc
     2521 ctacgagtac cagggccaga agtgcagcgc cgcctcgcgc gcctacatcc cggactccct
     2581 ctggcccgcg gtcagagatc gagttgtggg catgatcgaa gacatccgaa tgggcgatgt
     2641 ggctgacttc aggaatttca tgggagcagt catcgaccgc cgggcgttca cccggctgaa
     2701 gcagcacctg gatgcagcga a
//
LOCUS       DASRPQ010000960         1275 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2002420, whole genome shotgun sequence.
ACCESSION   DASRPQ010000960 DASRPQ010000000
VERSION     DASRPQ010000960.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2002420"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..465
                     /locus_tag="VFD73_10940"
     CDS             <1..465
                     /locus_tag="VFD73_10940"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HZI74509.1"
                     /translation="KASRPIIELNFRGDTEMRFMVIVKADQKSEAGVLPDKKLFAEMG
                     KFNEELAKAGVMLAAEGLQPSSKGARVKFSGSKRTVIDGPFSETKELVAGFWLWQVSS
                     KEEAIEWLKRAPFQEGEVEIRQVFEAEDFGAKFTPELREQEERIRQQVAARK"
     gene            complement(472..>1275)
                     /locus_tag="VFD73_10945"
     CDS             complement(472..>1275)
                     /locus_tag="VFD73_10945"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HZI74510.1"
                     /translation="ITIRMLLSHSAGFQNPTWPYKQGRAWEPFEPTRWEQLVSMMPYQ
                     EILFRPGSRFGYSNPAFIYLGRIIEQLTGDPYEGYIQKNIWTPLGLTWSYFGATPYHL
                     ARWRSNNYTVQRDSSGRLLVHANGRDFDPGITIPNSGWNAPLTDLASYLGFLTGAAHG
                     DTALANRFDTVLKRSSLEEMWRAVVPTGSQDDIPGAVGLSFFLHHEGDVLLVGHTGDQ
                     AGFRSFFYFRPDTKAAVITVLNTTDEASPDTAEAGWSRIKRAAMSLLAP"
BASE COUNT          275 a          353 c          421 g          226 t
ORIGIN      
        1 aaggcgtccc ggccgatcat cgagcttaac ttcagaggag atacggaaat gcgcttcatg
       61 gtgatcgtca aagccgacca gaagagcgag gcgggggttc tgccggacaa gaagctcttc
      121 gccgagatgg ggaagttcaa cgaggagctg gccaaggccg gagtcatgct ggctgcagag
      181 gggttgcagc ccagctccaa gggagcacgg gtgaagttct ccggcagcaa gcggacggtg
      241 atcgatgggc cgttctcaga gacgaaggag ctagtcgccg gcttctggct gtggcaggtc
      301 agctccaaag aggaagcaat tgaatggctg aagcgggctc cgttccagga aggcgaagtc
      361 gaaatccggc aggtgttcga ggccgaggat ttcggtgcca agttcacccc ggaacttcgc
      421 gagcaagagg agcggatacg ccagcaggtg gcagccagga agtagaatgg ctcacggagc
      481 cagcagcgac atggcggccc gcttgatcct gctccacccc gcctcggctg tgtcagggct
      541 ggcttcgtct gtggtattga gcacggtgat cacggcggct ttcgtatcag gacggaagta
      601 gaagaacgat cgaaagccgg cctgatcgcc ggtatgtcct accagcagca catctccctc
      661 gtggtgtaaa aagaacgaga ggccgacggc ccccgggata tcatcctgag agcctgtggg
      721 gaccaccgcg cgccacatct cctccagcga cgagcgcttg agcaccgtat cgaagcgatt
      781 ggccaacgcg gtgtccccat gggccgcacc ggtcaagaac ccgagatacg acgccagatc
      841 ggtgagcggt gcattccatc cgctgttcgg aatggtgatc cccgggtcga agtcgcgccc
      901 gttggcgtgc accagcaggc gaccggaact gtctcgctgc accgtgtagt tgttggatcg
      961 ccagcgggca agatggtagg gcgttgcacc aaagtagctc caggtgagac ccagcggtgt
     1021 ccagatgttc ttctggatgt agccctcata gggatcaccg gtcagctgct cgataatccg
     1081 cccgagataa atgaaggcag ggttgctgta cccgaagcgc gagcccggac ggaagaggat
     1141 ctcctgatac ggcatcatcg agaccagttg ttcccatctg gtgggctcga acggctccca
     1201 cgcacggccc tgcttgtacg gccaggtggg gttttgaaat cccgccgagt gggacaacag
     1261 catcctgatg gtgat
//
LOCUS       DASRPQ010000961         1000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2632903, whole genome shotgun sequence.
ACCESSION   DASRPQ010000961 DASRPQ010000000
VERSION     DASRPQ010000961.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2632903"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            318..638
                     /locus_tag="VFD73_10950"
     CDS             318..638
                     /locus_tag="VFD73_10950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74511.1"
                     /translation="MSMRTKLLATAGATVASAAIAVPASQAHAATPSCVAHKYYNMVA
                     GGCNGNNTSGSDQLWLECKVNGASFYYYINGSWHNRYADWQQDLFCSGGNAAAVAVGF
                     NHRS"
     gene            complement(767..>1000)
                     /locus_tag="VFD73_10955"
     CDS             complement(767..>1000)
                     /locus_tag="VFD73_10955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018529697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DnaB-like helicase C-terminal domain-containing
                     protein"
                     /protein_id="HZI74512.1"
                     /translation="TVTGTHNFVANGINLHNSIEQDSDVVILLHREDAYERESPRAGE
                     ADLIVAKHRNGPTATVTVAFQGHYSRFVDMASP"
BASE COUNT          221 a          321 c          291 g          167 t
ORIGIN      
        1 taccccacct cgtgccagac caagggctac ctcggtgcgg caggcgggac gtacacgctg
       61 cccgctggcc agcactgccc aaacaacagc cgggtgtagc ggcgacactg agccaccggc
      121 gggcaccacc gaacgatcac gccgaacccc ttgggtcggt gccagggcgg aacaaagcat
      181 gggaccagcc ggcaggaagc ggcggcggat cctgaatcca ctgatcgtca ccacaagccg
      241 gctacgcagc agatcgagtc ctgccggacc accgagtcac gaggcgaggt ggccaccggc
      301 aagaaaggga gaagcacatg tccatgcgga ccaagctcct ggctaccgca ggcgcgaccg
      361 tggcctcagc tgcgatcgca gtgcccgcgt cacaggcgca cgcagcgacg ccgtcgtgtg
      421 tcgcccacaa gtactacaac atggtcgccg ggggctgcaa tggaaacaac acctccggca
      481 gcgaccagct ctggcttgag tgcaaggtca acggagcctc gttttactac tacatcaacg
      541 gctcctggca caaccgctac gccgactggc agcaggatct cttctgctcc ggtggcaacg
      601 ccgcggcggt agccgtcggg ttcaatcacc ggagctaacc cggcaaatag taatccttca
      661 tacaggcctt ccaggccggg attcctggcc tggaaggcct cgcgcttacc acagatcaga
      721 ccatgtaata aagcgaccga ggttcgcata atgacaaacg acctgatcaa gggcttgcca
      781 tatcgacaaa tcttgaataa tggccctgga aggcgaccgt aacggtggcg gtcgggccgt
      841 tcctgtgctt agccacgatc aggtccgcct cgccggcccg cggcgattct cgctcgtagg
      901 cgtcctcgcg atgcagaaga attacgacgt cactatcctg ttcgatgcta ttatgtagat
      961 ttatcccatt ggcgacgaaa ttatgcgttc ccgtgacagt
//
LOCUS       DASRPQ010000962         1523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1053819, whole genome shotgun sequence.
ACCESSION   DASRPQ010000962 DASRPQ010000000
VERSION     DASRPQ010000962.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1053819"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..366)
                     /locus_tag="VFD73_10960"
     CDS             complement(<1..366)
                     /locus_tag="VFD73_10960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74513.1"
                     /translation="MKAETEAGSTCSACAELAGEIQAPGGIIYDNGLWLVSHHTGAYT
                     DPGELIVKPRRHCESLAELTREEARALGTVLWSAVRALERVIPAERIYAVSFNERVRH
                     LHFLLLPRTAAMPRGHVVSD"
     gene            complement(363..923)
                     /locus_tag="VFD73_10965"
     CDS             complement(363..923)
                     /locus_tag="VFD73_10965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74514.1"
                     /translation="MAPRKRYQLERVTIWPGERRGATWTFAGSPVSGTEQSYAVRDEN
                     FPSRNEWEFILRLPSSRNDRIEVRPRTTPNVKAWAELPDRSLTFTRATKGDARGKWYC
                     PVALADPTGNKSRVVVRGDQRNELPKWFEQLRTKMRTKEKVRNTKGTDAQALVMLVHP
                     DDHATMIRLFFATKVWVLTERIALTT"
     gene            complement(1080..>1523)
                     /locus_tag="VFD73_10970"
     CDS             complement(1080..>1523)
                     /locus_tag="VFD73_10970"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HZI74515.1"
                     /translation="IYSDVLEMALARGEAAVGFIVAHELGHIWRGHLSYHWLTAPGRL
                     FPYLGAAYSRACEYTCDRLGAFCQPDGAITGLLALAAGKRLHPLVDVREYAAQAVSDH
                     GFWVRRAELVSSHPLLPKRVAALINAGISIPPREQWTVSSPAVAA"
BASE COUNT          299 a          473 c          462 g          289 t
ORIGIN      
        1 atccgaaact acgtgcccgc gcggcatcgc agcggtgcgc ggaaggagga ggaagtgcag
       61 gtgccgaacc cgctcattga acgacaccgc atagattctc tcggccggga ttactcgttc
      121 cagggctcgg accgccgacc agagcaccgt acccaatgcc cgtgcttcct cacgagtcag
      181 ctccgccagc gactcgcagt gccggcgagg cttcacaatc agctcaccgg ggtcggtata
      241 tgctccggtg tgatgactga ccagccagag gccgttgtcg tagatgatgc cgcccggggc
      301 ctgaatttcc cccgcgagct cggcgcaggc actgcaggtc gatccagcct cggtctcggc
      361 tttcatgtgg tgagcgcgat gcgctcagtc agaacccata ccttggttgc aaagaagagt
      421 ctgatcatgg tcgcatggtc gtcagggtga accagcatca ctaaagcctg agcatcggtg
      481 cctttggtat ttcggacctt ttccttggtc cgcatctttg tccggagctg ctcgaaccat
      541 ttcggcagtt cattgcgttg atccccccgc actaccacgc gactcttgtt gccggtcgga
      601 tcagctaatg ctaccgggca gtaccacttc ccgcgagcgt cgcccttggt tgcacgagta
      661 aatgtcagag atcgatcggg cagctccgcc cacgccttca catttggtgt ggtcctggga
      721 cgaacctcga ttcgatcgtt ccggctggac ggaagccgga ggatgaactc ccattcgttc
      781 ctcgagggga agttctcgtc ccgcacggcg tagctctgtt cggtaccgct gacagggctg
      841 ccagcgaagg tccaggtcgc tccccgccgc tcgccaggcc agatcgtgac ccgctccaac
      901 tgatagcgct ttcgtggtgc catagtgacc tcctcggcat cccgggcaaa gccaggggga
      961 ccagaagcga ccaagagcca gggctgaaaa aactggaatt gatggaattt acgacgggcg
     1021 ggactcggct gcactgcggc agcggtgccg tcccaacgac ggcaccgcct gagttcgatt
     1081 taagcggcta ctgctgggct ggacaccgtc cactgctcgc ggggtggaat tgaaatgccg
     1141 gcgttgatca aagccgccac ccgcttgggt aacaacggat gggaagatac cagctcggct
     1201 cggcgaaccc agaaaccgtg gtctgagacc gcctgggccg catactcccg gacatcgacc
     1261 agggggtgca ggcgtttgcc ggcagcgagc gccagcagcc ccgtgattgc accgtcgggc
     1321 tggcagaatg cccccagccg gtcgcaggtg tattcacaag ctcgagagta ggctgctccg
     1381 agatagggga aaaggcgtcc tggagctgtg agccagtgat aactcaaatg accgcgccat
     1441 atgtggccga gctcgtgagc cacaatgaac cccaccgcag cttcacctct ggcgagcgcc
     1501 atctccagca catcggagta gat
//
LOCUS       DASRPQ010000963         1225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_429493, whole genome shotgun sequence.
ACCESSION   DASRPQ010000963 DASRPQ010000000
VERSION     DASRPQ010000963.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429493"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(157..>1225)
                     /locus_tag="VFD73_10975"
     CDS             complement(157..>1225)
                     /locus_tag="VFD73_10975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HZI74516.1"
                     /translation="RIGTSIIGSRVGRLVWASFVKASKVFGSRQGAVLSFCGPVILVL
                     LVGVWALGLTLGAALIMHSELGTSIRATNGETPTEFVTAMYAGGTSMAIVGASDFTPH
                     TSPTRLLFLFNSLIGMSVMSLTLTYLMQVYTALQRRNVLAMNIHFLSGCTGDAAELLA
                     RLGPQGQFSGGYTNLSELGVEMTQAKEAHHFYPVLFYFRFSDPYHSVSRSTLVALDTV
                     SLIKSALDDQKYRWLKEAGAVAQLWEASMMLVTTLEDTFLPHGAPDRKAQPDQQTRDR
                     WRARYRAALQRLRQAGIQITADGQAGAEAYISCRMQWDHHITNLAPSMAYSMEEIDAA
                     MSGFGSKDSPNDPRSRLHVAE"
BASE COUNT          250 a          367 c          375 g          233 t
ORIGIN      
        1 tcgagtttag caatggctca gaccagcttc gagccacttc ggattttagc caaatagttt
       61 tgcaccggaa actagtacta ggcgcagaaa tcctcaccaa gaggacttga tccccggccc
      121 gcaataagag aacgatgccc atcggatcag ctcctgctat tcggccacgt gtaggcggga
      181 ccggggatcg ttcgggctgt ccttcgatcc aaaaccgctc attgccgcgt cgatctcttc
      241 catgctgtaa gccatggagg gtgccaggtt cgtgatgtga tggtcccatt gcattcggca
      301 ggagatgtag gcctcggcac cggcctgccc gtcagccgtg atctggatcc ccgcctgccg
      361 aagccgctgc agggcagcgc ggtagcgtgc tcgccagcgg tctcgggtct gctggtccgg
      421 ttgggccttc cggtccggtg ccccatgggg aaggaaggtg tcctccaagg tggtgacgag
      481 catcattgac gcttcccaaa gctgcgcgac ggctcctgcc tccttcaacc agcggtactt
      541 ctgatcatcc agggcgctct tgatcaggct caccgtgtcc aacgcgacca gcgtggaacg
      601 ggacaccgag tggtatgggt cactgaagcg gaaatagaac agcactggat agaagtggtg
      661 tgcctccttg gcctgggtca tctcgacacc gagttccgac aggtttgtat agccgccact
      721 gaactgcccc tgaggtccga gacgtgccag caattcggcg gcatcgcctg tgcaccctga
      781 gaggaaatga atgttcatgg ccagcacgtt gcgccgctgg agcgctgtat agacctgcat
      841 cagataggtc agcgtcagcg acatcaccga catgccgatc agcgagttga acaggaaaag
      901 cagccgtgtc gggcttgtgt ggggggtgaa gtcgctcgcg ccgacaatcg ccatgctggt
      961 gccaccggca tacatcgcgg tgacgaactc ggtgggcgtc tcgccgttgg tggcccggat
     1021 ggacgtgccg agttccgagt gcatgatcaa cgccgcccca agcgtcagac ccagagccca
     1081 gaccccaacc agcagcacga ggatgaccgg accacagaag gacagaacgg ctccttgcct
     1141 ggagccaaaa acctttgagg ctttgacgaa ggaggcccag accagccgcc cgaccctgga
     1201 tccgatgatg ctggtgccga tccgg
//
LOCUS       DASRPQ010000964         1280 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3256599, whole genome shotgun sequence.
ACCESSION   DASRPQ010000964 DASRPQ010000000
VERSION     DASRPQ010000964.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1280
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3256599"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..374
                     /locus_tag="VFD73_10980"
     CDS             <1..374
                     /locus_tag="VFD73_10980"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HZI74517.1"
                     /translation="HDGVLGRRSAWPLVDESGKLKGIVTRGDLVQALESEGNEDMTLL
                     QAGASQLVVAHPDEMLDVAVDRMVRHNIGRLPVVDRADPTRLLGYLGRTGIATGWRQV
                     FEEERVREGGWLSHRRNRQRA"
     gene            complement(343..>1280)
                     /locus_tag="VFD73_10985"
     CDS             complement(343..>1280)
                     /locus_tag="VFD73_10985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74518.1"
                     /translation="IFDLMERASRGAEVWKTHHLATIRKVRNRLNNISTRSKGLVTDD
                     GVANDLPWGQFNDRHVYVLDVASLDPLAQDLVFARVVSKLREHLERRDLGVDHVVVFV
                     DELNKYAPAEGPDTYVRKMLLDLSERGRYLGLVLFSAQQFRSQVQRRVVGNAGTAVYG
                     RMDTDELATSGYTMISPSIKIKLATLPKGELMLRHPHFTQPIFVRFPRPPVMNSREGM
                     ERFPPAAELSFEDAVARQLRRLDQRVSSEAVRSLLEGRREEDVRRALAATRRERPADV
                     SSYFAACLGRRVIGEVPFTRRGIPALKRADDSYGG"
BASE COUNT          261 a          365 c          422 g          232 t
ORIGIN      
        1 cacacgacgg cgtgttaggc cgccgctccg cgtggccctt ggtggatgag tcaggcaagc
       61 tgaaagggat tgttacccga ggggacctgg tccaggctct ggaatccgaa ggcaatgagg
      121 atatgacgct actccaggcg ggggcgagtc aactggtggt tgctcatcct gacgagatgc
      181 tggacgtggc ggtggatcga atggtgcgcc acaacatcgg gcggctgccg gtggtcgacc
      241 gagcggatcc cactcgcttg ctgggatatc tgggccgcac tggaatcgcc acaggctgga
      301 ggcaggtctt cgaagaggag cgagtgcggg aaggcgggtg gctcagccac cgtaggaatc
      361 gtcagcgcgc ttgagagcgg gtattccccg ccgagtgaag ggaacttcgc cgatcactcg
      421 acggccgaga cacgcagcga agtagctcga aacatctgcg ggacgctccc ggcgggtcgc
      481 cgcaagtgcc ctgcgaacgt cttcctcgcg gcgaccttcg agcagagagc ggaccgcctc
      541 agaggatact ctctggtcca gcctacgcag ctgtcgcgca acggcatcct caaaggacag
      601 ctcggcggcg ggaggaaacc gttccatgcc ttccctacta ttcatcaccg gtggccgagg
      661 aaacctgacg aatatcggct gggtgaagtg agggtgccgg agcatgagct cgcctttcgg
      721 cagggtggcc agtttgatct tgatcgacgg ggagatcatc gtgtagcccg atgtagcgag
      781 ctcgtcggta tccatcctgc cgtagaccgc agtgccggca ttgccaacga cccgacgctg
      841 gacctgagat cgaaactgct gagcagagaa gagcaccagc ccgagatagc ggccacgctc
      901 ggagagatcc agcagcatct ttcgaacata ggtgtcggga ccttcggccg gtgcgtactt
      961 gttgagctcg tctacgaaga cgaccacatg atcgacgccg agatctcgac gttcgaggtg
     1021 ctcgcgcaac ttggacacca cgcgggcgaa taccaggtcc tgggccagag gatcgaggga
     1081 ggccacgtcg agcacataga catgccgatc attgaactgt ccccacggca ggtcgttggc
     1141 aacgccatcg tcggtgacga gtcccttaga ccgggtgctg atgttattga gacggttgcg
     1201 taccttccgg atagttgcca ggtggtgggt cttccagact tcagctcccc gagacgctcg
     1261 ctccatgaga tcgaaaatgc
//
LOCUS       DASRPQ010000965         1688 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3561754, whole genome shotgun sequence.
ACCESSION   DASRPQ010000965 DASRPQ010000000
VERSION     DASRPQ010000965.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1688
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3561754"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          285 a          550 c          516 g          337 t
ORIGIN      
        1 cccacgcacc gtggacgagg acaatcgtcg gggtctcacc agccatcgtc atcaccgctt
       61 cctctaggga cagttccaat gactccgcga tagtacgcac ctgttggcgt tcgcaggcga
      121 cccgaggggt ggtaggaact cgaaccccag ccttcagatc cgtagatcaa tgggacacgt
      181 ccggcccgtg cgccggaatc cgaactcgct ggtcagcgtc ctgcagcgtg tccggcatag
      241 atcccatgat ccggtaccgt ccggtcagtc cgtaagaaag ttgcgagagg ctccggccct
      301 caccacacga gcactaacct gtggattcgc taccgtcagc tagctcattg cgacgttttg
      361 cgcaagcgta tcccggccgt caatgtcacc agccgctctg ttccgggccc tgtcatcgcc
      421 gactggcacc acggtaagga tgaatccgcc ttttcccagg cggacctgct tgacgagaac
      481 cacgtcccgg gcccagtcct gatttctaat ctgcaggagt gagcactcga ccaagagccc
      541 cggcgagagg ggctagatcg aatcactggt ccgccgtgat gtcatcgcga tccggtagag
      601 gttggggaag ctgagttgtc cagaaatcgg tgccgggcgg tctggttagc cgcgacccgc
      661 ctgacctgca cattcgtggt accggccgcg agggttggct ccgtggccga gcgccaggta
      721 acgggagatc tacatttctc ttaactccgg ccgacgcctc ggtgagattt aggtatcttc
      781 gggcgagagc gacgaattta ccggtttgcc tgagttatcc agtcttgagt gattaccctt
      841 tatagcagct cactgccgat tgccatgatg attctgttct ccctgagggc gcccgaagag
      901 gtagcactat tccgatgaac ccacatctca taagcccggg gcgcaccgat ggcccggcag
      961 cgtaaggacc atccccaccg atcgcagcca gcccagtgtt cactgtgcgg cgtcgagctt
     1021 ccgctcgacc tgatggtgcc cgatggcgga caggcctgcg ccgacatccg ctggtactgc
     1081 aaagacgcca agtcgtgcac ggatcgctgg acagccaggc tgtcgggaac tggcggcctc
     1141 gcttcaattc cctccgtcgg cgagccgagg ccccgccgcg cttgattcag tgtcagcggg
     1201 tgatctcgtg ccaaccgacc tgctcggcat tcccgaaggg gcatagccga ctgctgctcg
     1261 gatcttcctt ccggctccca gacaggtgcc aggaagggtg tcgacgggga ggttcgtgca
     1321 gcacggacgc aagagcaccg gtccctcatt tgaaccggcg gcctcttcgt cccgaactgg
     1381 cggcgccgct gggcgtttgg tcctcgtccc agcttgctga gtgtgctgac ggtcgtcact
     1441 gctggcggct gtgcggggat gttgctgtac tttcgagctg acctggctcc cggctgcagc
     1501 atgatgcgct agtcctcgtc gtcacgccat ctccggcctg tatccggcaa cgtggccgcg
     1561 cccggcctct tccacggtct cgcggaccgc gttctcggcc tggtcagccg gaatccgcaa
     1621 cgtgctgtcg cgcgcccggc cggcagggat cgtggtcccc gcgagccgcc ggccgttgac
     1681 gtgccgga
//
LOCUS       DASRPQ010000966         2248 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1368176, whole genome shotgun sequence.
ACCESSION   DASRPQ010000966 DASRPQ010000000
VERSION     DASRPQ010000966.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2248
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1368176"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..211)
                     /locus_tag="VFD73_10990"
     CDS             complement(<1..211)
                     /locus_tag="VFD73_10990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74519.1"
                     /translation="MNEGPPARIDRTALERIIRRAAELQSAEREAGETLSSDELIAVG
                     REVGIPARHLQQAILEERTRIGGGSG"
     gene            complement(213..1076)
                     /locus_tag="VFD73_10995"
     CDS             complement(213..1076)
                     /locus_tag="VFD73_10995"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="slipin family protein"
                     /protein_id="HZI74520.1"
                     /translation="MDFLVPALTVAVVYSFLSLRVLRQYERGVAFFLGRFWGTKGPGL
                     IFLPAGFASQKRVSLRIMALDIPPQDVITRDNVSVKVNAVLYMRVSDPSKAVLEIEDY
                     HYATSQLAQTTLRSVLGEVELDELLSDREKINAVLKKIIDERTEAWGIEVSAVEVKDV
                     DLPDQMKRAMARQAEAERERRAKVIAAQGELQASQTLAQAARQLATEPSALQLRYLQT
                     VTEIAAENNSTTIFPIPIELFRPFLNAAASNPPRAEGSAEPPGPALPASDISSLMSQL
                     RIQAAQTPSKE"
     gene            complement(1083..>2248)
                     /locus_tag="VFD73_11000"
     CDS             complement(1083..>2248)
                     /locus_tag="VFD73_11000"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HZI74521.1"
                     /translation="RTGFGSFGGSLKDLSATQLGVIASRAALERSGVEPASVDHVVFG
                     NVLQTSADAIYLARHVGLGSGVPIETPAVTVNRLCGSGFEAIAQAAQQIALGESKVVL
                     AGGTESMSQAPHVVRGARWGLRLGPAAPLEDTLWEALRDPSCGLSMAETAENLAAKYR
                     ISRQAVDCYAARSQSCAAQAWSSGVFTEEVVPVAIQNRKTRAAEEWATDEHMRPATTP
                     EALAKLPPYFKKDGVVTAGNASGICDGAAALVLTSSSFARERGLRPLGRLLSWSSAGV
                     DPSIMGIGPVPAARKALARAGLGLEDMDLVEVNEAFAAQYLAVEQELGLDRERTNVDG
                     GAIAIGHPLGASGARLTLHLLHALRRRGGQYGLASACIGGGQGAAVVVEAFAE"
BASE COUNT          399 a          758 c          705 g          386 t
ORIGIN      
        1 atcccgatcc gccgccgatc cgggtgcgct cctccaaaat cgcctgctgg aggtgtcggg
       61 ccgggatgcc cacctcacga ccaaccgcga tcagctcgtc cgagctgagg gtttcgccgg
      121 cttcgcgctc ggcgctctgc aactcggcgg cccgccggat gatccgctcg agcgcggtcc
      181 ggtcgatccg ggctggtgga ccctcgttca tcctattcct tagagggagt ctgggccgcc
      241 tggatcctga gctgggacat aagtgaggaa atgtcggagg cgggcaaggc aggcccgggt
      301 ggctcggccg agccctccgc gcgcggcggg ttcgacgccg cggcattcag gaacggacgg
      361 aacagctcga tcggaatcgg gaagatcgtc gtagagttgt tttccgcggc gatctcggtg
      421 accgtctgca ggtagcggag ctggagcgca cttggctccg tggccagctg gcgggcggct
      481 tgagccagcg tctgggaggc ctgcaactcg ccttgagcgg cgatgacctt ggcccgccgc
      541 tcgcgctctg cttccgcctg gcgggccatg gcccgcttca tctggtcagg aagatccaca
      601 tccttcactt cgactgccga gacctcgatg ccccaggcct cggtgcgctc atcgatgatt
      661 ttcttgagga cagcgttgat cttctcgcgg tccgaaagca gctcgtcgag ctcgacctcg
      721 cctaagacgg atcgcagagt ggtttgcgcc agctggctgg tggcgtagtg gtagtcctcg
      781 atctccagca cggctttcga aggatcgctc acgcgcatgt agagaaccgc gttcaccttc
      841 accgacacgt tgtctcgggt gatcacatcc tgaggaggga tgtcgagcgc catgattctc
      901 agcgagaccc gcttctggct ggcaaaaccg gccggcagga agatcagccc aggacccttg
      961 gttccccaga aacggccaag gaaaaaggct acgccgcgct cgtactggcg gagaactcgc
     1021 aggctcagaa acgagtagac gacggcgacg gtcagggcgg gaacgagaaa gtccatagtc
     1081 gatcactccg cgaaggcttc aaccacgact gcggcaccct ggccgccgcc aatgcaggcg
     1141 ctggctaggc catattggcc gccgcgtcgc cgcaaggcat gcagcagatg gagggtgagg
     1201 cgggcaccac tcgcgccgag ggggtgaccg atcgcgatcg cgcccccatc gacattggtc
     1261 cgttcgcgat ccagtcccaa ctcctgctcg accgcgagat actgcgcggc aaatgcctcg
     1321 ttcacttcta ccagatccat gtcctcgagc ccaagtcccg cccgcgccag cgccttgcgg
     1381 gcggcgggca ctggaccaat gcccatgatg ctcgggtcga caccggcgct gctccatgac
     1441 aagaggcgtc ccagaggccg gagcccgcgc tcccgcgcaa aactgctgct ggtcagcacc
     1501 agagcggccg cgccgtcgca gatgcccgac gcgttgccgg cggtgaccac cccgtccttc
     1561 ttgaagtagg gaggcagctt ggccagcgct tcaggagtgg tggccgggcg catgtgctcg
     1621 tcggtcgccc actcttcggc ggctctggtc ttgcgattct ggattgcgac cggcaccact
     1681 tcttccgtaa aaactccgct actccaggct tgagcggcac aactctgact gcgcgccgca
     1741 tagcagtcca ccgcctgacg gctgatccgg tacttggccg ccaggttttc cgccgtctcc
     1801 gccatggaca gcccacagct cggatcccgg agcgcttccc acagtgtatc ctctaagggg
     1861 gccgccgggc caagccgaag accccaccgg gcaccgcgca caacatgcgg ggcctggctc
     1921 atcgattcgg tcccgcctgc cagaaccacc tttgactcgc ctaaagcgat ctgctgcgct
     1981 gcctgagcaa tagcctcgaa ccccgagcca cagagtcgat tgaccgtgac cgccggggtc
     2041 tcgattggaa cacccgagcc aagtccaaca tggcgagcca ggtagatggc atcggcggaa
     2101 gtctgcaaca cattgccgaa caccacgtgg tcgaccgacg caggttctac cccgctccgc
     2161 tcgagcgccg cgcgactcgc gataacaccg agctgggtgg cggaaaggtc cttgaggctc
     2221 ccgccgaacg aaccgaaccc agtccgca
//
LOCUS       DASRPQ010000967         1753 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2308546, whole genome shotgun sequence.
ACCESSION   DASRPQ010000967 DASRPQ010000000
VERSION     DASRPQ010000967.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1753
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2308546"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            743..1618
                     /locus_tag="VFD73_11005"
     CDS             743..1618
                     /locus_tag="VFD73_11005"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HZI74522.1"
                     /translation="MHRFGRRSAAVTAGIVFAGLSLLGGITAAPASAASNSNSNSNPN
                     NYLALGDSVPFGYNPLLVTPGVSPDVFVGYPRLASDLFRPRKKLFNASCPGETSTSLI
                     TGTRPDNGCQDYREFIGPLHVSYSGSQLDYAEGYLAANPRTGLVTMMIGANDLFLLIK
                     SCGGSTNVTCIEAGLPGLLDTLSSNLTTIYSGLRAAGFNGELVAVTYYSLNYADPVGT
                     GIIAEINTTLAKVTQAFGGTVADGFGEFQQAAAAFGGDSCAAGLLIHLTPTTCDVHPS
                     PAGAALLADAVRDAS"
BASE COUNT          312 a          560 c          571 g          310 t
ORIGIN      
        1 tccccgcgcc agactaattg acgggctcac agcaccaagg agacccggcg tcagcgggca
       61 accacacccg attttcacgc ccgcagggcg tccccgcagg gacacccggg actaattggg
      121 cggcaatccg agccaccgct gggccctgca tcatgcgacc gaatggtgaa tctgcgcacg
      181 cagaccggcg gtaccgacac gcccgacgcg aactacagca ccccgggcag tcctttgttc
      241 cagcgtggcc ctgggctttt atccggggcc cttcgcgcgt cagaccggcg gccaaatcca
      301 gcagcggttg gcagcgcagg cgccgggcga tgtcgtaggc ctcgctgatg gcggtttggg
      361 cggctgcgtg atcgccggag acgggtgagg tgttcggcgt ggtcgagcag ccgtgggcga
      421 ggcggtaggc ggtgctcagc tcgcgcagct cgctgatagc caaggcgaag gcggcggctg
      481 tgggctcgct gtcaccggtg gcgcggccca aggtctagcg cgcccgcccc gtggcaggag
      541 gccacgtcga caagatcccg gctgcaagcg gattctggga caatccggct accgcaagat
      601 cgacggtttc ttgacggcac gtcgatcgtg aggcaaagtc ccgtagtgat catccagtca
      661 gcattgagct gtctgaatcc ggttgctggc ctcgatacaa gagcttgctc ttgcccacgg
      721 cctggctgtg agggggagga tcatgcatcg atttggcaga cgttcggctg ccgtgacggc
      781 ggggatcgtc ttcgccgggc tcagccttct gggcggcata acggccgccc cggcctcggc
      841 cgccagcaac agcaacagca acagcaatcc caacaactac ctggccttgg gcgactcggt
      901 gcccttcggc tacaacccat tgcttgtcac gccgggcgtg agtcccgacg ttttcgtcgg
      961 ctatccgcgg ttggcatcgg atttgttccg gcctcggaag aaactgttca acgccagttg
     1021 ccccggcgag accagcacca gcctgatcac tggaaccagg ccggacaatg gctgtcagga
     1081 ttatcgtgag ttcattgggc ctttgcatgt cagctactcg gggagccagc ttgattatgc
     1141 cgagggctac ctggcggcga acccacggac cggcctggtc accatgatga ttggggccaa
     1201 cgacttgttc ctgctcatca aaagctgcgg aggctccacc aacgttacct gtattgaggc
     1261 cggcctcccc gggttgctcg acaccttgtc cagcaacctg acgaccatct actcaggcct
     1321 gagggcggca ggcttcaacg gtgagctggt ggccgtgacc tactattcgc tgaactatgc
     1381 cgacccggtc gggaccggga tcatcgcaga gatcaacacg accctagcca aagtgactca
     1441 ggccttcggc gggacggttg ccgacggttt cggcgagttc cagcaggcag ccgcggcgtt
     1501 cggaggtgac tcgtgcgcgg ccgggctgct gatccatctg acaccgacaa catgcgacgt
     1561 tcacccttcg ccagccggag cagccctgct agccgacgcc gtccgcgacg ccagttaggt
     1621 ttcgtcagcc ctcggccgcc agcgaaaggg cctgaagagc gcgagcggcg tgcgacgtgc
     1681 acctcgggct gcaggtgatt tcaggcggag gactggagag tgcctgataa gcgcgccgac
     1741 ccgccgatat ggt
//
LOCUS       DASRPQ010000968         1084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_430215, whole genome shotgun sequence.
ACCESSION   DASRPQ010000968 DASRPQ010000000
VERSION     DASRPQ010000968.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_430215"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..181
                     /locus_tag="VFD73_11010"
     CDS             <1..181
                     /locus_tag="VFD73_11010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74523.1"
                     /translation="ARSDWAPDPQHPLPKFSSPRRVPHGVTLIGRLFDEGTIGRVGLA
                     LERAFGVAAQRPAGF"
     gene            281..439
                     /locus_tag="VFD73_11015"
     CDS             281..439
                     /locus_tag="VFD73_11015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74524.1"
                     /translation="MSADRIETHEGSTRRGVTDESLEAGVRQNLVIALGVAVSMLLVV
                     VAGSLLSS"
     gene            473..>1084
                     /locus_tag="VFD73_11020"
     CDS             473..>1084
                     /locus_tag="VFD73_11020"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HZI74525.1"
                     /translation="MEQIKHIVLLMMENRSFDHYFGALNLPPELRSDVNGLGPNAVSN
                     LPIPLNPYMDGTADDPGVAPWSLDASGAVPRTVAPGAQGVLEPSRTPAIRLDFPDPPH
                     EWPACRVQVNEGRMDGFVRAYQESNRVLTVENPGTVALQGATPVQRIAELPHRIARAV
                     MGYYSRSTLPVYYDIADQFTICDNWFASFLGSPHPNRVYANAGF"
BASE COUNT          198 a          333 c          348 g          205 t
ORIGIN      
        1 ggcccgaagc gactgggcac ctgaccctca gcacccgctg ccgaagtttt cgtctccgcg
       61 gcgggtaccg cacggcgtca cgctgatcgg acgcttgttc gatgagggga cgatagggag
      121 agtgggcctc gctctggaac gcgcgttcgg agtggctgcg cagcggccgg ccggcttcta
      181 gcgcaagcgc cgcgtacctg agtgagcgat gtcacggtgc atgaactcat ttgggactaa
      241 cctcgaatcg aacgatgaac ctgcgaaacc ggaggagatc atgagcgctg atcggatcga
      301 aacccacgag ggtagtaccc gacgtggcgt gaccgatgag tcgttggaag caggagtcag
      361 acagaacctc gtcatcgcgc tgggtgtcgc agtatcgatg ttgctggtgg tggtggcggg
      421 ttctcttctg agttcctgat cgccggcgga gtgcgagccc ggagccatcc tggtggaaca
      481 gatcaaacac atcgttctcc tcatgatgga gaaccggtcg ttcgaccatt acttcggtgc
      541 tctgaacctc cctcccgagc tgcgtagcga cgtcaacggg ttgggcccga acgccgtttc
      601 gaatctgccg attccactga atccatacat ggacggcacc gctgacgatc caggagtggc
      661 cccgtggagc ctggatgcca gcggtgcagt tccccggacc gtcgctccgg gagcgcaagg
      721 tgtgttggag ccttcccgca cacctgcgat caggctcgac tttcccgatc ctccccatga
      781 gtggccggcg tgtcgcgttc aggtcaacga gggacggatg gacgggttcg ttcgcgcgta
      841 tcaggagagc aaccgcgtgc tcaccgtgga gaatccgggg acagtggcgc tccagggagc
      901 aacaccggtc cagcggatag cggagctccc gcaccggatc gcccgagcgg tgatgggcta
      961 ctactcgcgg tccaccctcc cggtgtacta cgacatcgcg gaccagttca ccatctgcga
     1021 caactggttc gcatcctttc tcggctcgcc tcacccgaac cgggtctacg ccaatgcggg
     1081 cttc
//
LOCUS       DASRPQ010000969         1846 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3257670, whole genome shotgun sequence.
ACCESSION   DASRPQ010000969 DASRPQ010000000
VERSION     DASRPQ010000969.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1846
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3257670"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            42..>1846
                     /gene="ppdK"
                     /locus_tag="VFD73_11025"
     CDS             42..>1846
                     /gene="ppdK"
                     /locus_tag="VFD73_11025"
                     /EC_number="2.7.9.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050242 - pyruvate, phosphate dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0015976 - carbon utilization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HZI74526.1"
                     /translation="MMETILNLGLNDATVEGLAAQSGNPQFAWDSYRRFVQMYGSVVF
                     ETPKKRFEQILDEHKQRCHIERDIDLPVDEMRAIVRRFKDCVKAETAREFPSEPLDQL
                     WGAIAAVFQSWNTRRAIDYRKLHDIPDSMGTAVNIVAMVFGNLGEDSGTGVAFTRDPS
                     TGEQRLYGEYLLNAQGEDVVSGSRTPLPIERLREQLPHAYQELERVARTLERHFRDVQ
                     DMEFTIERGNLYMLQTRRAQRSGHAAVRIVCDMVDEGVITDAEAVARIPPNDLNQLLH
                     PTLDPSSKLDLLTTGLPASPGAACGTLVFDADDAVRLSRSGQSVILVRRETSPEDFHG
                     MVTAKAILTARGGMTSHAAVVARGMGKPCVAGAQALQVDEKAHRLSVNGRSLNQGDWI
                     TVDGSSGKVFAGQAALIAPELSGNFTRVMKWADRIMQLRVRVNADTPADAHRGRDFGA
                     EGIGLCRTEHMFFTGDRLVVMRQMIVAQDTAGRQKALDKLLPMQRGDFEAIFRAMEGF
                     PVTIRLLDPPLHEFLPKEPAEIQALARELEMESARLQDIVDRLHEVNPMLGLRGCRLG
                     IIYPEITAMQVRAIFEAACTVAARKGRVMPEVMIPL"
BASE COUNT          338 a          577 c          614 g          317 t
ORIGIN      
        1 tggtctcggt tcgctcaggc gctgccgtca gcatgcccgg catgatggag accattctga
       61 acctgggact caacgacgcc acggtggaag gcctcgcggc ccagagcgga aatcctcagt
      121 tcgcctggga ttcgtaccgc cggttcgtcc agatgtacgg cagcgttgtg ttcgagacgc
      181 ccaagaagcg gttcgaacag atcctggatg agcataagca gcgctgccac atcgagcgcg
      241 acatcgatct gccggtggat gagatgcgcg ccatcgtccg gcgcttcaag gactgcgtga
      301 aagccgagac ggctcgggaa tttccctcgg agccgcttga ccaactctgg ggagcgatcg
      361 cggccgtatt ccagagctgg aatacccgtc gggccataga ctaccggaag ctgcacgaca
      421 tccccgactc gatgggcacc gccgtcaaca tcgtggccat ggtgtttggg aacctgggcg
      481 aggactccgg caccggcgtg gcctttaccc gagatccatc taccggagag cagcgcctgt
      541 acggcgagta cctgctcaac gcgcagggtg aggacgtcgt gtcggggtcg cgtacgcccc
      601 tgcccatcga gcgtctgcgg gagcagctgc cccatgccta ccaggaattg gagcgggtgg
      661 cccgaacgct ggaacgccac ttccgcgatg ttcaggatat ggagttcacc atcgaacgcg
      721 gcaatctcta catgctgcag accaggcgag cgcagcgctc gggacacgcg gccgtacgga
      781 ttgtgtgcga catggtggac gaaggggtga tcaccgacgc cgaggccgtt gcgcggatcc
      841 ctcccaacga cctgaaccag ctgctgcatc cgacgctcga tcccagcagc aaactggacc
      901 tgctgaccac cgggttaccc gcctcaccgg gtgccgcctg cggcacgctg gtgttcgatg
      961 ccgacgacgc ggtccgcttg agtcgctcgg ggcagtcggt gattctggtg cgacgggaga
     1021 cgtcgcccga agacttccac ggcatggtga ccgccaaggc catcctgact gcgcggggag
     1081 ggatgacctc ccacgccgcg gtggttgctc ggggcatggg aaagccttgc gtcgccggcg
     1141 cacaggcgct ccaggtcgac gaaaaggccc accggctctc ggtcaatggg aggagcctca
     1201 atcagggcga ttggatcacc gtagatggca gcagcggcaa agtgttcgcc ggccaggcgg
     1261 cactgatcgc accggagctg agcggcaatt tcacccgcgt gatgaagtgg gccgatcgga
     1321 tcatgcagct ccgggtgcgg gtcaacgccg acacgccggc cgacgcccac cggggccgcg
     1381 atttcggcgc tgaagggatc gggctctgcc ggaccgagca catgttcttc accggcgacc
     1441 ggctagtggt catgcggcag atgatcgtag ctcaggacac cgcggggcga caaaaggcgc
     1501 tcgacaagtt gcttcccatg cagcgcgggg acttcgaggc aatcttccgg gctatggagg
     1561 ggtttcccgt caccattcgt ctgctcgacc ctcctctgca cgagtttctt cccaaggagc
     1621 ctgccgagat tcaggcgttg gcacgcgagc tcgagatgga gtccgcgcgg ctgcaggaca
     1681 tcgttgaccg gctccacgag gtgaacccga tgctgggcct tcgggggtgc cggctcggca
     1741 tcatttatcc ggagatcacc gcaatgcagg tgcgggcgat cttcgaggca gcctgtaccg
     1801 ttgccgcccg aaagggccgg gtgatgcccg aggtcatgat tccact
//
LOCUS       DASRPQ010000970         1376 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4187961, whole genome shotgun sequence.
ACCESSION   DASRPQ010000970 DASRPQ010000000
VERSION     DASRPQ010000970.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1376
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4187961"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..326
                     /locus_tag="VFD73_11030"
     CDS             <1..326
                     /locus_tag="VFD73_11030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74527.1"
                     /translation="RNDSGSGFMDGASVVCPGATLIVDGHAYYRGSCILTDKEGDRAT
                     LVWLCDAKVGDRCDGPMEWVGGTGKYTGIKGNSTFNGGFIGPGPQGYSLLNRLRKNPR
                     TIVIC"
     gene            complement(446..>1376)
                     /locus_tag="VFD73_11035"
     CDS             complement(446..>1376)
                     /locus_tag="VFD73_11035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009797950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZI74528.1"
                     /translation="IGRPSIPPEYLLRASLLQAFFTIRSERQLMEQLSYNLLFRWFVG
                     LPVEAAVWDVTVFTKNRDRLLEGDVAHEFLRAVLADPQVRPLLSDEHFSVDGTLIEAW
                     ASMKSFRRKDGSDEPPGPGRNSPRDFRGEKLSNETHASTTDPDARLYKKAAGAAAKLC
                     HMGHVVMENRSCLVVETKVTQASGTAEAEAAVAMIGAMPGQHRITVGADKLFDTSGFV
                     ADMRALNVTPHVAQNDNGRASAIDARTTRHPGYTVSLILRKRLEEAFGWIKTIGGQAK
                     THFRGTPRVDWMFTLAAAAYDLIRLPKLLDAAA"
BASE COUNT          249 a          447 c          432 g          248 t
ORIGIN      
        1 tccgcaacga ctcaggttca ggattcatgg acggtgcctc ggtggtctgt cccggcgcca
       61 ccctgatcgt cgacgggcac gcctactatc ggggcagctg tatcctaacg gataaggagg
      121 gggatcgcgc aacgctggtc tggctgtgcg acgctaaggt cggagaccgc tgcgacggtc
      181 caatggagtg ggtcggtggc acgggcaagt ataccggtat taaaggcaat agcactttca
      241 atggtgggtt catcggtccg ggaccccagg gatacagcct ccttaacagg ctgcggaaaa
      301 acccccgaac gattgtgatt tgctaagcat tcagccgcga gcgcggggtg agagaaggcc
      361 gtcaaggact atcgttggca aatttcttgg cgtgttctgc gaattttatg tccgcaggca
      421 gccagcagac agaccccggg cgtcactagg cggccgcatc cagcagcttg ggcaaccgga
      481 tcaggtcgta ggcggccgca gccagtgtga acatccagtc cacccggggc gtgccgcgga
      541 agtgtgtctt ggcttgcccc ccgatcgttt tgatccaacc gaacgcctct tcaagccgct
      601 tgcgcaagat cagactgacc gtgtagcccg gatgccgcgt ggtgcgcgcg tcaatggcgg
      661 aggcgcggcc attgtcgttc tgcgccacgt gcggggtcac gttgagggcc cgcatgtcag
      721 ccacgaagcc gctggtgtcg aacagcttgt cggcaccaac cgtgatgcgg tgctgaccgg
      781 gcatcgcgcc gatcatcgcc accgctgctt cggcctcggc cgtaccgctc gcctgggtga
      841 ccttggtctc aaccaccagg cagctgcggt tctccatcac cacatggccc atgtggcaca
      901 gcttggccgc cgcgcccgcc gccttcttgt agagccgcgc gtcaggatcg gtggtcgagg
      961 cgtgggtctc gttgctcagc ttctcgccgc ggaagtcacg cgggctgttg cggccgggac
     1021 cgggcggctc atcactgcca tccttgcgcc gaaagctctt catcgacgcc cacgcctcga
     1081 tcaacgtgcc atccaccgag aagtgctcat ccgacagcaa cggccgcacc tgcggatccg
     1141 ccagcaccgc ccgcaggaat tcgtgcgcaa cgtcgccctc cagcagccga tcgcggttct
     1201 tggtgaacac cgtcacgtcc cagaccgccg cctccaccgg caggccaacg aaccagcgga
     1261 acaacaggtt atagctcaac tgttccatca gttgccgctc cgagcggatc gtgaagaacg
     1321 cctgcagcag cgaggcccgc agcaggtact cgggcgggat cgagggccgc ccgatc
//
LOCUS       DASRPQ010000971         2259 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_430447, whole genome shotgun sequence.
ACCESSION   DASRPQ010000971 DASRPQ010000000
VERSION     DASRPQ010000971.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2259
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_430447"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..493
                     /locus_tag="VFD73_11040"
     CDS             <1..493
                     /locus_tag="VFD73_11040"
                     /inference="COORDINATES: protein motif:HMM:NF021759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SprT-like domain-containing protein"
                     /protein_id="HZI74529.1"
                     /translation="LDPRIPRGSRRQAEREFLRFPVSAYVAPRERPRIERARPGDVAL
                     LNQLTELHRALNARHFGGALRDIPIRLSGRMKSRLGELAANWDTGEAREIGISRRHVL
                     RHDWSEVEHTLLHEMVHQWQAEAGLRVDHGASFRTKAREVGIVPAAKRQVVVPPGVRQ
                     AAG"
     gene            699..1862
                     /locus_tag="VFD73_11045"
     CDS             699..1862
                     /locus_tag="VFD73_11045"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HZI74530.1"
                     /translation="MVAACPYPARRGTPIRIRRLAEGMVALGHQVHVVTYHFGSGDSD
                     STLSVHRIPSISRYRRLSPGPTWVKLALLDPLLTLKLWQVLRKVRVDVIHAHHYEGLL
                     VAGAARLRSRIPVIFDAHTLLTSELPFYHLGLPVRVKRRIGATLDRRLPAIADHVITV
                     TERIRTRLLQIGRLPEEQISVVPNGVESRFFSENGHGSTGRPNGHPTLIFTGNLAPYQ
                     GIDLMLQALRKVLNCRSDVRLKIVTESSFAGYDGLARELGVFGAIELVKAPFEELPNL
                     LAGATIAVNPRIDCDGIPVKLLNYMAAGKPVLSFAGSAPGVRHRQTGWLVPDGDVDGF
                     AEGALTLIGNAELATALGQNAQRQVKDQHDWNRSAELAERVYRRVIRERATAR"
     gene            1859..>2259
                     /locus_tag="VFD73_11050"
     CDS             1859..>2259
                     /locus_tag="VFD73_11050"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI74531.1"
                     /translation="MKICFIVSEFFGWGKYGGYGSATRVLAAELVRRGVAVTVVTPAR
                     GGQPAREEIDGVAVLSYPAHKVRTQFQLLRDVRADIYHSQEPSLGTWLARKAAPGSRH
                     IVTCRDTRVSTDWLIEIRSWLLDGSFRTLLT"
BASE COUNT          409 a          700 c          730 g          420 t
ORIGIN      
        1 cctcgatcct cgcatcccgc ggggcagccg acggcaggcc gagcgtgagt tcctgagatt
       61 tccagtctcg gcctatgttg caccgcgtga gcggccgcgg atcgagcgcg cccgcccggg
      121 agacgtggca ctgctgaatc agctgactga actgcaccga gccctcaatg cccgtcattt
      181 cggtggcgcc ctccgcgata tcccgattcg cctgtccggc cggatgaaga gtcggctggg
      241 cgagcttgcg gccaactggg acactggtga ggcgagggaa attggaatca gccggcggca
      301 tgtcctgagg cacgattggt cggaggtgga gcacaccctc ttgcacgaga tggtgcatca
      361 gtggcaagcg gaggcgggac ttcgggttga ccatggtgcc agcttccgga ccaaggcgcg
      421 ggaagtggga attgtgcccg ccgccaagcg gcaggtcgtt gtcccaccgg gagttcgcca
      481 agctgccggc tgacccctgt acggctcgtc cgcggacggt atactcaagt gaaggtggcg
      541 gacgtaggaa cagagcacag tcctccccgg cgtaatccac gatcagaccg cacgccatcg
      601 accggcctct ctcgagagcg ctgtttgagt gaggagttcc tacgagatct ccccgagtga
      661 atggaacgtg cgactctggc gcaccgctga gtatcgcgat ggtcgcggcg tgtccctacc
      721 cggcacgccg aggcactcca attcggatcc gccggttggc agagggcatg gtggcgctcg
      781 ggcaccaggt ccatgtggtg acctaccact tcggtagtgg cgactccgat tccacccttt
      841 cggtacaccg aattccttcg atcagtcgat atcgccggct ttcacctggg cccacctggg
      901 tgaagctggc acttctggat cccctgctga cactcaaact gtggcaggtg ctccggaagg
      961 tgcgggtgga cgtgattcac gcccaccatt atgagggtct gttagtggcc ggcgctgcac
     1021 gcctgcgctc gcggattcca gtgatcttcg atgctcacac tctcctcacc tcggagttgc
     1081 cgttttacca cctgggatta ccggtgaggg tcaaacggcg gatcggggca accctcgatc
     1141 gtcggcttcc ggcgatcgct gatcacgtca ttaccgtgac cgaacggatc cgaacccggc
     1201 ttctgcagat aggtaggctc ccggaggaac agatctcggt agtgcccaat ggagttgaat
     1261 cgcgtttctt ctcggaaaac gggcatggct cgactggcag acccaacggc catcccacct
     1321 tgatctttac tggcaacctc gcgccctatc agggaatcga cctgatgctt caagcgcttc
     1381 gaaaggtgct gaactgtcgg agcgatgtcc gcctgaagat cgtcacggaa tcctcctttg
     1441 cgggctacga cgggctcgcg cgggagctgg gagttttcgg ggcgatcgag ctggtgaaag
     1501 caccgttcga ggagctaccg aacctgctcg ccggagctac catcgcggtc aacccgcgaa
     1561 ttgactgtga tggcattccg gtcaagctgc tgaactacat ggccgccgga aaaccggttc
     1621 tctcctttgc agggtcggca cccggggtac gtcaccgcca gaccggctgg ctcgttccgg
     1681 acggcgacgt ggacgggttc gccgagggcg ccctgaccct gatcggaaac gcggagctgg
     1741 cgactgcgtt ggggcagaac gcccagcggc aggtcaagga ccagcacgac tggaaccggt
     1801 ccgcggaact ggctgaaagg gtctaccggc gagtgatccg ggagcgcgcc accgctcgat
     1861 gaagatttgc ttcatcgtca gcgagttctt cggatggggg aagtacggcg gctatgggag
     1921 cgccaccagg gtactggcgg cagagctcgt tcggcgcgga gtggcggtca cggtggtcac
     1981 ccccgcgcga ggaggccagc ccgcacggga agaaatcgac ggcgtcgccg tgctctccta
     2041 tccggcacac aaggtccgga ctcaattcca gctgttacgc gacgtccggg ccgacatcta
     2101 ccactcacaa gagccgtcgc tcggcacgtg gctcgccagg aaggccgccc caggcagccg
     2161 gcacattgtt acctgccgcg acaccagggt gtcgaccgat tggctcatcg agatccggtc
     2221 gtggcttctg gacggaagct tccgaacgct gctcacctt
//
LOCUS       DASRPQ010000972         1103 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2634270, whole genome shotgun sequence.
ACCESSION   DASRPQ010000972 DASRPQ010000000
VERSION     DASRPQ010000972.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1103
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2634270"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..837
                     /locus_tag="VFD73_11055"
     CDS             <1..837
                     /locus_tag="VFD73_11055"
                     /inference="COORDINATES: protein motif:HMM:NF037627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI74532.1"
                     /translation="PGEAESPSPYPSDMAVRPALGEFLRTRRGLLSPADVGLPTGERQ
                     RDNGLRREEVAVLAGISSEYYLRLEQGREHNPSEKVLEGIARALKLNDDAVAYMRNLV
                     REQHGPDHAAVTLNPAIDALMASWPLAAAHVHDQGLTVVSANALARALSPHYDRGSNT
                     LRALFLEPEMRRFYRNWEKLTVWTVRLVRTFAGRDPNRQLLDLVAELRCESPTFRELW
                     DRQEVKYAGDGLMMIDHPLVGPLDLHFQHLALPGTGHTLVAYWADPGSPSEQGLRNLS
                     ER"
BASE COUNT          189 a          321 c          374 g          219 t
ORIGIN      
        1 cccggcgagg cggagagtcc tagtccgtat cctagtgata tggcagtgcg tcctgcactt
       61 ggcgagtttt tgcgtactcg gcgcggcctg ctgtcgcctg ccgatgtggg tttgccgacc
      121 ggcgaacggc aaagagacaa cggattgcga cgcgaggagg tcgcggtgct ggcgggtatc
      181 agttccgagt actacctgcg tctggagcag gggcgcgaac acaacccgtc agagaaggtg
      241 ctcgagggca ttgcccgggc gctgaagctg aacgacgacg cggtggcata tatgcgcaat
      301 ctcgtcaggg agcagcatgg tccggatcat gctgccgtga cgttgaaccc ggcgatcgac
      361 gcactcatgg ccagctggcc attggcggcc gctcatgtgc acgatcaggg tttgacggtg
      421 gtcagcgcca acgccctggc ccgcgccctg tcaccgcatt acgaccgcgg gtccaacact
      481 ctgagagcgc tgttcctcga gccggaaatg cgtaggttct accggaactg ggagaagttg
      541 acggtgtgga cggtgcgatt ggtgcgcacc tttgcgggtc gagatcccaa tcgtcagttg
      601 ttggacctgg tcgcagagtt gagatgcgag agcccgacgt ttcgcgagct gtgggaccgc
      661 caggaagtca agtacgcagg tgacggactg atgatgatcg accatcccct agtgggcccg
      721 ctcgacctgc actttcagca cctggcctta ccgggtacgg gccacaccct ggtggcctac
      781 tgggccgatc cggggtcgcc ctcagaacag ggactacgca acctgtctga gcgttgacgc
      841 ggcctgcttg cctggtcctg tcactactag gcatcggccg gtctggatct tctgccacag
      901 tcatcagacc attgggtcgt tagtgctgga agtggttgca cagcaggagg taccgatgcc
      961 cgcgggccgg gtggcgacgc ttgatcgccg cttcattcag gatccgaacg ctttttaccg
     1021 cgcactcgct gtgcgtgacc cggcgcattc cgcgcagcta tggggcgggc ttggggcgtg
     1081 gcttgtcgcc ggcgatgccg aag
//
LOCUS       DASRPQ010000973         1258 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_116384, whole genome shotgun sequence.
ACCESSION   DASRPQ010000973 DASRPQ010000000
VERSION     DASRPQ010000973.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1258
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116384"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..603
                     /locus_tag="VFD73_11060"
     CDS             <1..603
                     /locus_tag="VFD73_11060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74533.1"
                     /translation="TNGLKTRTQGVDVTANLRVPTGENARLDLNASANYTKNAILEVD
                     PLPPVLVAAGSTEPGLLDSVTYIGITQERPNWRGTLQANWTTGRLSTLGRFSYYGKFS
                     SAQPGFCDLCRENYGGKGLVDAELGYRFDFVNLAVGVRNLFDTYPDKPSSTVVVDAPD
                     FTDTSKDFNSNFGTFPWAAASPFGYEGRFVYARTEIQLSR"
     gene            609..>1258
                     /locus_tag="VFD73_11065"
     CDS             609..>1258
                     /locus_tag="VFD73_11065"
                     /inference="COORDINATES: protein motif:HMM:NF024240.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HZI74534.1"
                     /translation="MAAPYDLIVVGGGHNGLVTAAYVAGAGARVLVLERREVLGGACV
                     TEELWPGFKVSTAAYVNSLLRPEIIRDLELKRHGFKMLPRNPSSFTPFPDGRSLLLGP
                     NKAQTHKEVAKFSQKDAGALPRYEAMLERIAAFIEPTLTQTPPNPWSFRPGNLLKLAR
                     LGMSFAKLGPEGQKAIEILTGAATPILDRWFESEQLKVTLATDAIIGAMASPSMPGT"
BASE COUNT          233 a          396 c          386 g          243 t
ORIGIN      
        1 accaatggtc tgaagactag gacccaggga gtggacgtca cggcgaatct gcgggtgccc
       61 accggggaga atgcccggct cgacctgaac gcctcggcca actacaccaa gaacgcaatt
      121 ctggaagtcg atccgctgcc gcccgtcctc gttgccgccg gttccaccga gcccggcctg
      181 ctcgattcgg tgacctacat cgggattacc caggagcggc ctaactggcg gggcactctc
      241 caggccaact ggactactgg ccggctgagc acgctgggac gtttttccta ttacgggaag
      301 ttctcctcgg ctcagcccgg attctgcgat ctgtgccggg agaactatgg ggggaaggga
      361 ctcgtcgatg ccgagctagg gtaccgcttc gatttcgtca acctcgcggt gggggtccgg
      421 aatctgttcg atacctatcc cgataaaccc agctcgaccg tggtggtcga tgccccggat
      481 ttcaccgaca cgtccaagga cttcaacagc aatttcggta cgttcccctg ggccgcggca
      541 tcgcccttcg ggtacgaagg gcgttttgtc tatgctcgga ccgaaatcca actgagtcgc
      601 tgaaccgcat ggcagctcct tacgatctga ttgtcgtcgg tggtggtcac aacggcctgg
      661 tcaccgcagc gtatgttgcc ggagcgggtg cgagggtgct ggtgctggaa cgccgcgagg
      721 tgctcggcgg agcctgcgtc accgaagagc tctggcccgg cttcaaggtc tcgaccgcgg
      781 cctacgtcaa cagcctcctg cggccggaga tcatccgtga tctcgagctc aagcgtcatg
      841 ggttcaagat gctgccgcgg aatccatcct ccttcactcc gtttccggat ggtcgttctc
      901 tcctgctcgg tccgaacaag gcccagaccc acaaggaggt cgccaagttc tcgcagaagg
      961 atgcaggtgc gctgcccagg tatgaggcga tgctggagcg gattgcggcg ttcatcgagc
     1021 cgacgctcac ccaaaccccg ccgaatccat ggtcgttccg gcccggaaac ctgctgaagc
     1081 tcgcgcgact ggggatgagc tttgcgaagc tcggtcccga aggccagaaa gcgatcgaga
     1141 ttctgaccgg cgccgcgaca ccgattctgg accgctggtt cgaatcggag cagctcaagg
     1201 tgacactcgc caccgatgcc atcatcggtg ccatggcgtc accgtcgatg ccaggcac
//
LOCUS       DASRPQ010000974         3370 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1683266, whole genome shotgun sequence.
ACCESSION   DASRPQ010000974 DASRPQ010000000
VERSION     DASRPQ010000974.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3370
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1683266"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..930
                     /locus_tag="VFD73_11070"
     CDS             <1..930
                     /locus_tag="VFD73_11070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74535.1"
                     /translation="VTRSLNALEKIDPATAEWRELLDAAYTNLSELARVTTEYAASVQ
                     EDPDRLAAVERRRDLIFRLTGKYGASLQAVLDTKREAEAELELLDTADTDLRSLAGQR
                     SAAEQAMREAAEALTLKRQEASGRLARGVNRLLPQLGLSGGKLSVQLVELAEPSVHGG
                     ETVQLSVQLNQGHEPRPLAKVASGGELSRLMLALKVVLVKHDAIATLVFDEVDQGIGG
                     EVGVQVAAALADVAQRHQVLVITHLPQIAARADSHLAVSKAARRGVATSDVQVLHGED
                     RVNEIARMLGDTEGDAARRHAQAMLRREGVGSR"
     gene            complement(938..2470)
                     /locus_tag="VFD73_11075"
     CDS             complement(938..2470)
                     /locus_tag="VFD73_11075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74536.1"
                     /translation="MGHYVERLAIMVCLALPAAAWGQLPPVGVPRGVVRVELDGSLDY
                     FDREFRDGRLESYAAPLTSPALGSDRIPLLATADTTIGRIIGNSGYRLNLGALTADTH
                     AEVGTGFFGLSLGVTNGITIFGRIPLVRTRVELSTALDPSGADAGVNPGESEQLPFFS
                     EFDAALATLSSNLAAGTYDGDPNQKALAQATLADGTALRADLFTLLADPATASPVLPV
                     AASGAGTALTGRIATLQTTLSTNLNVSGFTLTPALPQTQFSKQDLTDLLSGELGFRLT
                     ESPIVFRGDAELGSSLTLADAWDRGGHRGGFRTAISGLVRLPTGQRARTDRLLAIGTG
                     EGQTDIQLDWVTDIGGGPIGARLTGSYVRQLPSTISARVTSPDQPLVGPDRLAFVRRD
                     PGDIIALGVRPFYRLARTLALQAGVEHWNRGADKVSYPSPADALPGVDAALLGEDTKV
                     NATQISFGVTYSNPGGLRPGGKGLPVDASWSYERIVQSGGGRTPDTHAMRGSFRVYFG
                     VW"
     gene            2462..>3370
                     /locus_tag="VFD73_11080"
     CDS             2462..>3370
                     /locus_tag="VFD73_11080"
                     /inference="COORDINATES: protein motif:HMM:NF012509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase family protein"
                     /protein_id="HZI74537.1"
                     /translation="MPQSTSREKSSGVRPVSAARLANSLFTSSFATRATVASSAPGRV
                     NLIGEHTDYNGGPVLPVAIERRTAVVGRVAGRWALTSDTESGVAEVEIDDPMRHSWPD
                     YVVGVVRELRALRAAPPGAELAIATTLPIGAGLSSSAALTVSAAKALSLLAGKRLSPA
                     QLVEVAFRAEYHQVGVRCGRMDQTIAAHGERGTALLFETFDGILQRVPFPGRLWVVET
                     GRSHRLTGGALNQRRKECEEALAFCREWRPGLAALAQLPPSDLPEMERRLPPPLVKRV
                     RHVVTETARTRAAAEALAAGDLTRVGR"
BASE COUNT          604 a         1062 c         1156 g          548 t
ORIGIN      
        1 gtgacccggt cgttgaacgc actggagaag atcgatccgg caaccgcgga gtggcgcgag
       61 ctgctggatg ccgcctatac caacctctcg gagctggccc gggtgacgac tgagtacgcc
      121 gcatcggtgc aggaagatcc cgatcggctg gccgcggtgg agcggcggcg cgatctcatc
      181 tttcggctga ccggaaagta tggagcttcg ctgcaggcgg tgctcgacac caaacgtgag
      241 gcggaggcag agctcgagct gctcgatact gccgacaccg atctccggag ccttgccggc
      301 cagcgctcag cggctgagca agccatgagg gaggcggctg aggcattgac tctcaagcgc
      361 caggaggctt cgggccgact ggcccgtggg gtcaaccgtc ttctcccgca gctgggtctc
      421 agcgggggca agctctcggt acagcttgtg gaacttgccg agcccagtgt tcacggcggc
      481 gaaacggtcc agctcagcgt gcagctgaat cagggtcacg aaccgcggcc gctggccaag
      541 gtcgcatccg gcggtgaact ctcgaggctc atgctcgctc tcaaggtcgt tctggtgaag
      601 cacgatgcca tcgccaccct ggtgttcgat gaagtcgacc agggaatcgg cggagaagtc
      661 ggggttcaag tggcggctgc actggccgat gtcgctcagc gtcaccaggt cctggtcatt
      721 acccatctgc cccaaatcgc cgctcgggca gacagccacc tcgcggtttc caaggcagcc
      781 cggcggggcg ttgccacgag cgacgtccag gtgcttcatg gagaggatcg ggtcaacgag
      841 attgcccgca tgctcggcga caccgaggga gatgccgcca gaaggcatgc ccaggcgatg
      901 ttgcggcgag agggcgtggg gtcgcgctga cagggggcta ccacactcca aagtagaccc
      961 gaaagctgcc gcgcatcgcg tgagtatccg gcgtccgacc accacccgat tgtacaatcc
     1021 gctcgtagct ccagcttgca tccaccggca atcccttccc cccaggtcgg agcccaccgg
     1081 gattggagta ggtgacaccg aatgagatct gggttgcgtt caccttggtg tcctctccca
     1141 gaagagcggc atcgacacca ggcagggcgt ccgccggaga gggataggac actttgtcgg
     1201 ctccccgatt ccagtgctct actccggcct ggagcgccag cgtgcgcgcg agccgataga
     1261 acgggcgaac gccgagggcg atgatgtcac ccggatcgcg ccgcacgaac gccaatcgat
     1321 cggggccaac caatggctgg tcgggagatg tcacccgggc cgagatcgtg gaaggaagct
     1381 gccgcacgta tgagccggtg agccgcgcac cgatcgggcc cccgccgatg tcggtgaccc
     1441 aatcgagctg gatgtcggtc tgcccttcac cggttccgat ggcaagcaag cggtcggtcc
     1501 tcgcgcgctg accggtgggc aggcggacca gccccgaaat tgcggtccgg aatccacccc
     1561 gatgtccgcc acgatcccag gcgtcagcca gtgtgagcga gctcccgagc tccgcatcac
     1621 cgcgaaagac gatgggcgac tccgtgaggc gaaaccccaa ctctccactg agaagatcag
     1681 tcaggtcctg tttgctgaac tgggtctgcg gaagcgccgg tgtgagagtg aagccgctga
     1741 cattcaaatt ggtcgagagc gtggtctgca gggtggcaat gcgaccggtg agtgcggtac
     1801 cggcgccgct cgccgcgacc ggcaacactg gtgatgccgt ggcgggatcg gccagaagcg
     1861 tgaagaggtc ggcccgaagc gccgtgccat cggccaacgt cgcctgcgcg agcgccttct
     1921 ggttcggatc gccatcgtag gtacccgcgg cgagattact gctcaacgtc gccagggcgg
     1981 catcgaactc gctgaagaac ggaagctgtt cgctctcacc cggattgacg ccggcatccg
     2041 ctccgctagg gtccagagcg gtggagagct caactctggt gcgaaccagg ggaatcctgc
     2101 cgaagatcgt gataccattg gtcacaccga ggctgaggcc gaagaaaccg gtcccgactt
     2161 cggcgtgggt gtcggcggtc aaggctccta gattcaggcg atacccggaa ttcccgatga
     2221 tccggccgat tgtggtatcc gcggtcgcca gcagcggaat gcgatcgctg ccgagcgcgg
     2281 gactggtgag tggagcggca tagctttcga gccgtccatc gcggaattct cggtcgaagt
     2341 agtcgagtga gccatccagc tcgacccgga ccactccccg cgggaccccg accggcggaa
     2401 gctgtcccca cgcagcggcg ggcaaggcca ggcacaccat gattgcgagg cgctcgacgt
     2461 aatgccccaa agtacctccc gagagaagtc atccggcgtc aggccagtgt ccgcggcaag
     2521 gctcgcaaat tcgctgttta cgtcgagctt tgccacccgt gccacggtgg catcctccgc
     2581 ccccggccgg gtcaacctga tcggagagca caccgactac aacggcggac cagtgttgcc
     2641 agtagcgatc gagcgccgga cggcggtggt gggccgggtg gcggggcgat gggcactcac
     2701 atccgatacg gagtccggcg tggcggaggt cgagatcgat gacccgatgc gtcactcctg
     2761 gcccgactac gtggtggggg tggtacgaga gcttcgggcg ctgcgggcgg cgccaccggg
     2821 tgcggagctg gccatcgcca ccacgctgcc aattggcgcc gggctctcct cctcggctgc
     2881 gctcaccgtc tccgcggcca aggcgctgag tctgcttgcg gggaagcggc tttcaccggc
     2941 gcaactggtc gaggtcgcat tccgcgccga gtaccaccag gtgggcgttc gctgcggccg
     3001 catggatcag acgattgccg cgcacggcga gcgaggcacc gcactactct tcgagacctt
     3061 cgacggcatc ttgcagcggg tgccgtttcc cggtcgcttg tgggtggtgg agactgggcg
     3121 ctcgcaccgg ctcaccggcg gcgcattgaa tcagcggcgc aaagagtgtg aggaggcgct
     3181 cgcattctgc cgggaatgga ggccaggact tgccgcgctc gcacagctgc cgccaagcga
     3241 tttgccggag atggaacggc ggcttccacc cccgctggtc aagcgcgtgc ggcatgtggt
     3301 gacggaaacg gcgagaacgc gtgctgcggc ggaggcactc gccgctggag atctcacccg
     3361 ggtgggccgg
//
LOCUS       DASRPQ010000975         1990 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1055126, whole genome shotgun sequence.
ACCESSION   DASRPQ010000975 DASRPQ010000000
VERSION     DASRPQ010000975.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1990
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1055126"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..644)
                     /locus_tag="VFD73_11085"
     CDS             complement(<1..644)
                     /locus_tag="VFD73_11085"
                     /inference="COORDINATES: protein motif:HMM:NF016497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 43 glycosylhydrolase"
                     /protein_id="HZI74538.1"
                     /translation="MLSLPYARRGTAALALVIALFACTGGPAPSSGSLPTETGSTPTV
                     AEPDRAVAFSHLPNPVRAGNFPDPYVLVTDSLYYAFSTNSATANVPVLRSSDLVTWTD
                     IGDAMPLLPSWAVSGKRHTWAPAVLAIGKRYVLFFTARDGQSNLQCLGRAESPNPAGP
                     FIDGSARPFVCQTDLGGSIDPSVVRDSSGQVYLLWKNDGNCCGRPVTLWSQPLSP"
     gene            complement(995..>1990)
                     /locus_tag="VFD73_11090"
     CDS             complement(995..>1990)
                     /locus_tag="VFD73_11090"
                     /inference="COORDINATES: protein motif:HMM:NF005560.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZI74539.1"
                     /translation="TPLSLAGRLRLGLLALRARRVRQWQELEDLTAEEWLIRLGGREV
                     YDVVWRPLLKGKFGQYADEISAVWFWNKLKLRGGSRGRGGEEVLAYYKGGFAALASQL
                     ANEICARGGMIRLESAVTALRVGDGRITGVKVDDAVIAADAVLATPALPIVADLVEPH
                     TSPEYVSSLRRVQYLANICIVLELDRSLSDTYWLNVNDPGFPFVGVIEHTNFEPPETY
                     QGRRLVYLSRYLPETEELYSMADEEVVRYCLDHLRRMFPALTPDWMLGAHVWRARYAQ
                     PIVVRRYSKLIPPVETPLPGLFLSSMAQVYPEDRGTNYAIREGRAAGRRIAEALG"
BASE COUNT          410 a          606 c          622 g          352 t
ORIGIN      
        1 gggctgagtg gctgactcca aagcgtgacc gggcgaccgc agcagtttcc gtcgttcttc
       61 catagcagat aaacctggcc cgaggagtct cgaacgaccg aagggtcaat ggagccacca
      121 agatctgttt ggcagacgaa aggacgcgca ctcccgtcga tgaacggccc tgccgggttc
      181 gggctctccg cccgtccaag acactgcagg ttgctttgcc catctctcgc ggtgaaaaac
      241 agcacgtatc gtttcccgat cgcgagcact gccggtgccc aggtgtgtcg ttttccgctg
      301 actgcccagg acggcagcag gggcatcgcg tccccgatat cggtccaggt caccaggtca
      361 ctcgaccgca acactggaac atttgccgtg gcggaatttg tcgagaacgc gtaatacagc
      421 gaatcggtca ccaggacgta tgggtcggga aaatttccgg cgcgcaccgg attgggcaaa
      481 tgggagaatg ccaccgcacg atccggctca gcgacagtgg gagtcgagcc cgtttcggta
      541 ggaagcgaac cggacgacgg tgccggtcca ccggtgcagg caaagagtgc aatgacgagg
      601 gcaagcgcag ctgtgccccg ccgcgcgtaa ggcagcgaca gcatcgttcg ggcagtggtc
      661 caggtctagg gtgacccgag ccgggatctc tgacgccgcg atgcgcgtgt tggatcgcga
      721 tgctgacgcg aggccgctcg gtggcggcct agggaaaggc aagcgaggtg cccgtgggct
      781 tacggcactt gattcaacga aaggagtgca aatctttgcg gagtttgtcc gcttggccga
      841 ccaggaaatt gtcgaacctg aagatcagac ccgatcctgc cgataatgga gagatgttgt
      901 cgggagttgg accagcagaa agcgctctat ggcggatgga agccgtcttg cagagcgcga
      961 tacgaacgat gttactgcaa cgcctccact gggttcatcc cagggcctcc gcaatccgtc
     1021 tgcctgcagc gcgaccctcg cgaatggcgt agttggtacc ccgatcctcc gggtagacct
     1081 gcgccatgct agacaggaaa aggccgggca gcggcgtttc caccggcggg atcagcttgc
     1141 tatatcggcg aacaacgatg ggctgggcat accgtgcccg ccagacgtga gcgccgagca
     1201 tccaatccgg ggtcagtgcc ggaaacatcc gccgcaggtg atccaggcag tagcgcacga
     1261 cctcttcgtc agccatcgaa tagagctctt cggtctccgg cagatagcgg gagagataga
     1321 ccagcctgcg gccctggtag gtctcgggcg gctcgaaatt ggtgtgctcg atgaccccga
     1381 cgaatgggaa tccggggtcg ttgacgttga gccaatatgt atccgacaga ctgcgatcca
     1441 gctccaagac gatacagatg ttggcgagat attgaacacg gcggagcgag ctcacgtact
     1501 cgggactggt atggggctcg accaggtcgg cgacgatggg gagtgccggc gtggcgagta
     1561 ccgcgtccgc cgcaatcaca gcatcatcga cctttactcc ggtgatcctg ccatctccga
     1621 cccggagcgc cgttaccgcc gattcgagcc ggatcatccc gccccgggcg cagatctcgt
     1681 tggccagctg gctcgccagc gcagcaaagc cacccttgta ataggccaga acctcctcgc
     1741 ctccacgtcc ccggcttcca ccgcgtagct tgagcttgtt ccagaaccag actgccgaga
     1801 tctcgtccgc gtattgaccg aactttcctt tcagcagtgg gcgccagacg acgtcgtaca
     1861 cttcacgccc accgagacgg atcagccatt cttcggcagt cagatcctcc aactcctgcc
     1921 actgccgaac tcggcgagcg cggagagcaa ggagacccag acgcaaccgg cccgccagtg
     1981 acagcggtgt
//
LOCUS       DASRPQ010000976         1052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1055191, whole genome shotgun sequence.
ACCESSION   DASRPQ010000976 DASRPQ010000000
VERSION     DASRPQ010000976.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1055191"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1052
                     /locus_tag="VFD73_11095"
     CDS             <1..>1052
                     /locus_tag="VFD73_11095"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-ribosomal peptide synthetase"
                     /protein_id="HZI74540.1"
                     /translation="YNAVMDESPESLVGLRQLLIGGEALSRIHVQRGLERLGQVAIIN
                     GYGPTEGTTFTCCEHIERGEIEGRLWIPIGVPIANTQVYVLDERMEPVAVGVVGELYI
                     GGAGLARGYLNRPGLTGEKFVPNPFSGKRGGRLYRTGDRTRWLAEGKLEFVGRRDEQV
                     KVRGYRIELGEIEAALLGMEEIAEAVVVVREDEPGERGLVGYVVGGEGKEADVNAIRR
                     ALKAKLPEYMVPAIVVLERMPLTVNGKIDRRALPAAEGTRGESYEAPQTPVQDVVASI
                     WAKVLGVERVGIDDNFFELGGHSLLATRAMSRIREAFQVEMPLRVLFEAPTVRGLAEQ
                     VEVARRAGQGLEIPKIT"
BASE COUNT          213 a          190 c          459 g          190 t
ORIGIN      
        1 tataacgcgg tgatggatga atcgccggag agtcttgtgg gcttgaggca gttgttgatt
       61 ggtggggaag cgctgtcgcg aatccatgtg cagaggggat tggagcggct ggggcaggtt
      121 gcgatcatca acggatatgg accgacggag gggaccacgt ttacctgttg tgagcatatt
      181 gagcggggag aaatcgaggg caggctgtgg ataccgatcg gggtgccgat cgcgaatacg
      241 caggtgtatg tgttggacga gaggatggag ccggtggcgg tgggagtggt gggagagttg
      301 tacatcgggg gggcggggct ggcgcggggg tatttaaatc gtcccgggtt gacgggggag
      361 aagtttgtgc cgaacccgtt cagcggaaaa aggggagggc ggttgtatcg cacgggagat
      421 cgaacgcggt ggctggcgga aggcaagctg gagtttgtgg gacggcgaga tgagcaggtg
      481 aaggtgcgcg ggtatcggat tgagttgggg gagattgaag cggcgctgct ggggatggag
      541 gagattgcgg aggcggtagt ggtggtgcgg gaagatgagc ccggggagag agggctggtt
      601 gggtatgtgg tgggcgggga aggtaaggaa gcggatgtga atgcgatccg gagggcattg
      661 aaggcgaagc tgccagagta catggtgcct gccatcgtgg tgctggagcg aatgccgctg
      721 actgtgaacg ggaagatcga ccggcgggca ttgccggcag ccgaagggac gcgaggggaa
      781 agctatgaag cgccacagac gccggtgcaa gacgtagtcg ccagtatctg ggcgaaggtg
      841 ttgggcgtgg agcgagtagg gattgatgac aactttttcg agttgggcgg gcactcgctg
      901 ctggcgacac gagcgatgag ccggatacgg gaggcgttcc aggtggagat gccgttgcgg
      961 gtgctgttcg aagcgccaac ggtgcgaggg ctggcggagc aagtggaagt ggcgcgccga
     1021 gcgggtcagg ggctggagat acccaagatc ac
//
LOCUS       DASRPQ010000977         1617 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3563631, whole genome shotgun sequence.
ACCESSION   DASRPQ010000977 DASRPQ010000000
VERSION     DASRPQ010000977.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3563631"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1377)
                     /locus_tag="VFD73_11100"
     CDS             complement(<1..1377)
                     /locus_tag="VFD73_11100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012305518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
                     /protein_id="HZI74541.1"
                     /translation="MRITVQITLESGVGESEMVEVARLERGPSRPDTLGLSLTEARSI
                     LAGLEQALVEQQTAELLAQAQRCARCGRARACKGHHLIVFRTPFGKLTLDSPRLYRCP
                     CESEAQKSFSPLAELLCERTSPELLYLETKFAALVSYGLTVELLKEVLPIGQALNTMS
                     LRRKVQQTAGRLEAELGAGQDVFVGDGPKDQAALSSLATPIVAGLDGVYVHAKGQRSR
                     REGWFEVIVGKSLPAEDRPSACFGFVSRYDLQPKGRLSAWLDGQRLQQEQPVTFLSDG
                     GDTVRELPRGLIPQAEYLLDWFHVTMRLTGMSRQAKGVREADQPDLSADLEEMLEHLK
                     WNLWHGKEPRALEILDELAYALEVEDGSPEHRKLLKAVRAFEGYIAANRALIPNYGDR
                     YRQGKIIATAFVESAVNQVVSKRFVKKQQMRWTPAGAHLLLQVRTQVLNGDWRATLSR
                     WYPGMQLTP"
BASE COUNT          275 a          531 c          499 g          312 t
ORIGIN      
        1 gggcgttagc tgcatgccgg gataccaccg ggacagcgtg gcgcgccagt cgccattcaa
       61 gacctgggtc cggacttgca gtagaaggtg cgcacccgcg ggcgtccagc gcatctgctg
      121 tttcttgacg aagcgtttgc tcaccacctg gttgacggcc gactccacga aggccgtcgc
      181 gatgattttt ccttgtcggt accgatcgcc gtaattgggg ataagggctc ggttggcagc
      241 gatgtagcct tcaaatgccc ggacggcctt gagcaatttg cggtgctcgg ggctgccgtc
      301 ttccacctcc agcgcatagg ccagttcgtc caggatctcc aacgcccggg gctccttccc
      361 gtgccacagg ttccacttga ggtgctccag catttcctcc aggtcggcgc tcaggtccgg
      421 ttggtccgct tccctcacgc ccttagcctg gcggctcatc ccggtcaggc gcatggtcac
      481 atggaaccag tcgagcaagt actcggcctg cgggatcaat cccctcggca actcgcggac
      541 cgtgtcgccg ccgtccgaca ggaacgtgac gggctgctct tgctgcaggc gctggccgtc
      601 gagccacgcc gataaccgcc ctttgggctg gaggtcgtaa cggctcacga agccgaagca
      661 cgccgaaggt cgatcctcgg cgggcaggct tttacccacg atgacctcaa accagccttc
      721 ccttcgcgag cgctggcctt tggcatggac gtagacgccg tccagtccgg cgacgatggg
      781 ggtggctaag gaggataaag cagcttgatc tttcgggccg tcacccacaa aaacgtcctg
      841 ccctgcgccg agttcggctt ccagccgccc ggccgtttgc tgtaccttcc gtcgcagact
      901 catggtgtta agggcttggc cgatcggcag cacctccttc aacaactcca ccgtgagccc
      961 gtaagacacc agggccgcaa acttggtctc caggtacagc aactcgggcg aggtccgctc
     1021 gcagagcaac tccgccagcg gactgaaact tttctgcgct tcggattcgc acgggcaacg
     1081 gtacaggcgc gggctgtcga gcgtcagttt gccaaagggc gtgcggaaca cgatcaggtg
     1141 gtggcccttg caggcgcgcg cccggccgca gcgggcgcag cgttgcgcct gggcgaggag
     1201 ttcggcggtt tgctgctcga cgagggcctg ttccagcccg gcgagaatcg agcgcgcttc
     1261 ggtcagggag agtcccagcg tgtccggccg cgagggccca cgctccaggc gcgccacctc
     1321 gaccatttcg gattcaccca cccctgactc cagcgtgatt tggaccgtaa tcctcatgcc
     1381 gctttcctct acgacccaag ccagcggaag ccttggacta aaacctccgt cgcgcttttg
     1441 cctccggttt gccccggtct cctcggtact cagctcaatg cccttactgg ctgaccctaa
     1501 ggtgaagaag tcgttcagct cgaagcccgg cggggggcct ggcttgatct ggagcctggc
     1561 aaaggaggcg gcaaaaggca ctggccccgc gattttggcc acgaaggcgt cttgaaa
//
LOCUS       DASRPQ010000978         3169 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_116832, whole genome shotgun sequence.
ACCESSION   DASRPQ010000978 DASRPQ010000000
VERSION     DASRPQ010000978.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3169
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116832"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            22..453
                     /locus_tag="VFD73_11105"
     CDS             22..453
                     /locus_tag="VFD73_11105"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HZI74542.1"
                     /translation="MARNDELSGTQIFWWTTLGLGTGLLAGFALSEWVGGVNRTRFRR
                     AARRIGQAVPPRITPAASARAVDAALHGESRLAGFAIEVVGVSRGTVELRGWVADRGS
                     RALAGRIACAVPGVETVINSILVRGEDDSFPGGKRVTDQSA"
     gene            450..3137
                     /locus_tag="VFD73_11110"
     CDS             450..3137
                     /locus_tag="VFD73_11110"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF004349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HZI74543.1"
                     /translation="MTEPLAPQYNPTAIEAELYSWWLERGLFAPEQHAPGSGDPYVIM
                     MPPPNVTAVLHMGHGLNNTVQDVLIRFERMRGRAALWVPGTDHAGIATQNVVERILAE
                     EGLTRFDLGRDAFVERVWQHVRETGAAILEQLKALGCSADWSRTYFTLDEGLSRAVRE
                     VFVQLYEQGLVYRGHYIINWCPRCLTALSNEEVEKEEVDAHLWHLRYPFADGAGSVTV
                     ATTRPETMLGDTAVAVHPEDERYRNLVGRELRLPLVDRLIPVVADAAIDPSFGSGAVK
                     VTPAHDPADFEIGRRHHLPSIDVMTPEARISLAAPERFQGLDRYEARRRVVAELEAAG
                     LLERIEDHRHAVGHCYRCTTVVEPRLSDQWFVRMEPLARPALRAYRDGTLRFVPERRG
                     DDYVAWLEGIRDWCISRQLWWGHRIPVWYCEHPDCGRTSVSRVDLELCPACGGPVRQD
                     NDVLDTWFSSWLVPFSSLGWPDRTRDLATYYPGDTMVSAPEILFFWVARMIMSGLHFM
                     GEVPYTDIYLHGTVRDTLHRKMSKSLGNGIDPLEVVRRYGADALRYSLVSGMSVGTDV
                     ILDPDDLEGSFAPGRNFANKLWNAGRFILTNLDGPPRPLGGGGKRVVRREELTLADRW
                     IIARCEATVTEATEAYQRFRLNDAASAIYRFIWSDLADWYIEQVKPRLYGDSPGGDVA
                     RAVLAQTFDVALRLLHPIMPFITEALWRRFPGRAPTASISIAPWPRPDQRARDEQALN
                     QFGLVQELVGAIRVIRAEYGVPPGQAVRAYVNGQNPAIVEALRQERSTILRLAKLSDL
                     SLEESSDRVGGHGVLSDGTAVFVPLGEAIDLGRECGRLGTEVERLIRLLESQEKKLGN
                     EQFVSRAPTDVVERERQKLTTWREQYEVLVRKRELLGCS"
BASE COUNT          531 a         1002 c         1069 g          567 t
ORIGIN      
        1 tcttcagtaa gaggaattcg cgtggctcga aatgatgagc tgagtggaac ccagatcttc
       61 tggtggacca ccctcggtct tggcactggc ctgctcgcgg gctttgccct gagcgaatgg
      121 gtcggcggag tgaatcgtac ccggttccgc cgagctgccc gccggatcgg ccaggccgtg
      181 cccccgcgca tcaccccggc cgcgtcggct cgcgcggtgg acgccgccct ccatggtgaa
      241 tcccggctgg cgggctttgc catcgaggtc gtcggcgtca gccggggcac ggtggaactg
      301 cgtggctggg tagcggatcg gggcagccgg gcgctggctg ggcggatcgc ctgtgcggtg
      361 cccggcgtcg agacggtgat caacagcatt ctggtccgcg gtgaagatga cagcttcccc
      421 ggcggaaagc gcgtgaccga ccagagcgca tgaccgagcc gctcgctccc caatacaatc
      481 cgaccgccat cgaagccgag ctctacagct ggtggctcga gcgtggcctc tttgctccgg
      541 agcagcacgc gcccggcagc ggtgatccct acgtcatcat gatgcctccg ccgaacgtga
      601 cggcggtgct gcacatgggc cacggcctca acaatacggt ccaggatgtc ctgatccgct
      661 tcgagcggat gcgggggcgc gccgccctct gggtcccggg taccgatcat gccggcatcg
      721 ccacgcagaa cgtagtcgag cgtattctgg ccgaggaggg actcacccgc ttcgatctgg
      781 gacgcgacgc gttcgtggaa cgggtttggc aacacgtccg ggaaaccggc gccgcgatcc
      841 tcgagcagct caaggccctc ggctgttccg ccgactggtc ccgcacctac ttcaccctgg
      901 acgaagggct ttcccgcgca gtgcgcgaag tcttcgtgca gctctacgag cagggtctgg
      961 tctaccgggg acattacatc atcaactggt gcccgcgctg cctgacggca ctctcgaacg
     1021 aggaggtaga aaaagaagaa gtcgacgcac acctctggca cctgcgctat ccctttgccg
     1081 acggcgcggg ctcggtcacc gtcgcaacca ctcgtcccga gacgatgctg ggtgataccg
     1141 cggtggccgt acacccggag gatgagcgct accgcaacct ggtgggacgc gagctgcggc
     1201 tgccgctcgt ggaccggctc attcccgtcg ttgcagatgc agcgatcgat ccgagcttcg
     1261 ggtcgggggc cgtgaaagtg acaccggccc acgaccctgc cgacttcgag atcggccgcc
     1321 gccaccactt gcccagtatc gatgtgatga cgccggaggc acggatcagc ctggcggcgc
     1381 ccgagcgctt tcaaggtctg gaccgctacg aggcacggag acgcgtcgtc gctgagttgg
     1441 aggcagctgg tctgctcgag cgaatcgagg atcatcgcca cgccgtcggg cactgctatc
     1501 gctgcacgac agtggtcgag ccccgactct ccgatcagtg gttcgtgcgg atggagccgc
     1561 tggctcgccc cgccttgcgc gcctaccgcg atggcactct ccgctttgtt cctgagcggc
     1621 gcggagatga ctatgtcgcc tggctggagg ggattcgcga ctggtgtatc tcccgccagc
     1681 tctggtgggg acatcggatt ccggtgtggt actgcgagca tcccgactgc ggccgcacca
     1741 gcgtctcccg cgtcgatctc gaactatgcc ccgcgtgcgg cggtccggtg cggcaggaca
     1801 acgacgttct ggatacctgg ttttcctcct ggctggttcc cttctccagc ctgggctggc
     1861 ccgaccggac ccgagatctt gccacctact atcccggcga cacgatggtc tccgcgcccg
     1921 agattctttt cttctgggtg gcgcggatga tcatgtcggg tctccacttc atgggagaag
     1981 ttccctacac cgacatctac ctgcacggca cggttcggga cacgctgcac cgcaagatgt
     2041 cgaagtcgct gggcaacggc atcgatccac tcgaggtggt gcgccgctac ggcgccgacg
     2101 cgctccggta ttcgctggtt tcgggaatgt cggttggcac cgatgtgatc ctcgatcccg
     2161 acgacctgga aggttcattc gcgcccgggc ggaacttcgc caacaaactg tggaacgcgg
     2221 gccgttttat cctcaccaac ctggatggcc cacctcgtcc tctcggaggc ggagggaagc
     2281 gagtcgtgcg ccgcgaagag ctcacgctgg ccgaccgctg gatcatcgcc cggtgtgagg
     2341 cgacggtcac cgaagccacg gaggcctacc agcgattccg gctgaacgat gctgcaagtg
     2401 ccatctaccg gttcatctgg agcgacctcg ccgactggta catcgagcag gtgaagcccc
     2461 gcttatacgg cgactctccc ggtggagatg tggcgcgcgc ggtgctggcg cagacgttcg
     2521 atgtggcgct ccggctgctg catccgatca tgccgttcat cacggaagcc ctgtggcggc
     2581 gcttcccggg gcgcgctcca acggcatcca tctccattgc accatggccg agaccggatc
     2641 agcgagcccg cgacgagcag gcactgaatc agttcggatt ggtccaggaa ctggtcggag
     2701 cgatccgggt gatccgcgcg gaatacggag tgcctcctgg ccaagcggtg cgggcatacg
     2761 tgaacggcca gaatcccgcg atcgtcgaag cgttgcggca ggaacgatcg accattctgc
     2821 gcctggccaa gctgtccgac ttgtcgctgg aggagagcag cgaccgggtg ggaggccacg
     2881 gcgttctgtc cgacgggaca gctgtcttcg tcccactggg agaggcgatc gatcttggcc
     2941 gtgagtgcgg ccggttggga accgaggtgg agcggttgat ccgtctcttg gagagccagg
     3001 agaaaaagct cggcaacgag cagttcgtct cccgggcgcc gaccgacgtg gtggagcgcg
     3061 agcggcagaa gctcacgacc tggcgggagc agtacgaggt attggtgcgg aagcgggaat
     3121 tgctggggtg ttcgtgagga agaggacgga gaaggcggag aggacggag
//
LOCUS       DASRPQ010000979         1241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2309521, whole genome shotgun sequence.
ACCESSION   DASRPQ010000979 DASRPQ010000000
VERSION     DASRPQ010000979.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1241
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2309521"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            257..652
                     /locus_tag="VFD73_11115"
     CDS             257..652
                     /locus_tag="VFD73_11115"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HZI74544.1"
                     /translation="MVERLSTRTAERRRLDRVYGAISDPTRRAMLGILAGGEVNIGML
                     AQRFPISFNGVSKHVKVLEQAGLVRRSVRGREHWLALRPAPLREASHWLEHYRQFWDA
                     RLKALEEFLVRDDATAGPTRPQPRGRSSR"
     gene            complement(781..>1241)
                     /locus_tag="VFD73_11120"
     CDS             complement(781..>1241)
                     /locus_tag="VFD73_11120"
                     /inference="COORDINATES: protein motif:HMM:NF013087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HZI74545.1"
                     /translation="QIALAHPGLRGVGFDLPEVGPIFEDYAASQGVEGRLQFAPGDFF
                     SDPLPKADVVTMGHILHDWDLEQKKLLIKKAWDAIPPGGAFVVYESIIDDQRSQNAFG
                     LLMSLNMLIETPGGFDYTGADCIAWMREAGFKDAYVQHLLGPDSMVVGLK"
BASE COUNT          226 a          380 c          380 g          255 t
ORIGIN      
        1 tccccgcgat gggtcagttc cttctcggcc tgcagcagct cgagtcgggc agtcagccac
       61 tgctctcgcg ttccggttgg gtggctggtg gcgggttctt tggtaagatt ggccatcgtt
      121 tcctcctagt cacagtcacg agtcacgagt cacgagtcac gagttacgag tcaccgcggg
      181 tagtcatcgc ccgcgactca tgactcgcga ctcgcgaccc ttgtcattcg tcccatctcc
      241 aacgacattc taccatatgg ttgaacgttt gtctacccgc accgctgagc gtaggcgact
      301 cgaccgggtc tatggcgcca tctccgaccc cacccgtcgt gccatgctcg gaattctggc
      361 cggcggcgag gtcaacatcg ggatgctggc ccagcgtttt cccatctcgt tcaacggcgt
      421 gtcgaagcac gtgaaggtgc tggagcaggc gggtctggtc cgccggagcg tgcgggggcg
      481 ggagcactgg ctcgcgctcc gccctgcccc gcttcgcgag gccagccact ggctggagca
      541 ttaccggcag ttctgggacg ccaggctcaa agcgctggag gaatttttgg tgcgggacga
      601 tgctacagcc ggcccgactc gcccccaacc gcgcgggagg agttcaagat gagtgcggcg
      661 ctcaatctag gaggcgtgtt tcgaggctgg ctcgatccga gcgcagcagc gagtatctcg
      721 tgatatcgag ttccgcgatc gccggcagtc cgaggcaaga acgcagtacg gccagcgatc
      781 ctacttgagc ccaaccacca tcgaatccgg gccaaggagg tgttgaacgt aggcgtcctt
      841 gaatcccgcc tctcgcatcc acgctataca atccgctccg gtgtagtcga agccgcccgg
      901 agtctcgatc agcatattga ggctcatcag gagtccaaat gcattctgcg atcgttgatc
      961 atcgattatc gactcgtaca ctacgaaggc gccgccaggc ggaatggcgt cccatgcttt
     1021 cttgatgaga agcttcttct gttccaggtc ccaatcgtga agaatgtggc ccatggtgac
     1081 cacatcggct tttggtagag ggtcggagaa gaaatcgccg ggggcgaatt ggagccggcc
     1141 ttctactccc tgtgaggcgg cgtagtcttc gaagattggc cccacctccg gcaggtcgaa
     1201 tcccacgccg cgaagccccg gatgagcgag cgcgatctgg a
//
LOCUS       DASRPQ010000980         1072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3258941, whole genome shotgun sequence.
ACCESSION   DASRPQ010000980 DASRPQ010000000
VERSION     DASRPQ010000980.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3258941"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..499)
                     /locus_tag="VFD73_11125"
     CDS             complement(<1..499)
                     /locus_tag="VFD73_11125"
                     /inference="COORDINATES: protein motif:HMM:NF014656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HZI74546.1"
                     /translation="MSRLPLGLPSSRARRSALAAVSILSALSILACGSSAQSARVILP
                     PGSPFGAVTDSLKAHGVITHPRWFKLMARIRGVDRTVHAGVYEFPAGTSEWTVLGMLA
                     HGKKAALRFTVPEGLTIQEVAALATERLGIPEDSFVAAARDGKAASALLGMQVPSFEG
                     FLRPET"
     gene            complement(496..957)
                     /gene="ruvX"
                     /locus_tag="VFD73_11130"
     CDS             complement(496..957)
                     /gene="ruvX"
                     /locus_tag="VFD73_11130"
                     /inference="COORDINATES: protein motif:HMM:NF015607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HZI74547.1"
                     /translation="MIPTSGRILGIDWGEVRIGLALSDETQTLASPLDTLVRRAGKRF
                     PMNRFLALVSTHSPVGFVVGLPLTLEGSEAASAAAARDVATAISSHTGLPVELWDERM
                     STARALGAIQAQGGSTRGRKAEVDALAASVLLQHFLDARRNAADPAEGAGR"
BASE COUNT          207 a          349 c          327 g          189 t
ORIGIN      
        1 aggtctcggg acggaggaag ccctcgaacg agggtacctg cataccgagc agggcagaag
       61 cggctttacc gtcccgcgcg gccgcaacaa aggaatcttc gggaatcccc agccgctccg
      121 tagcgagcgc agccacctcc tggattgtga gtccttctgg caccgtaaag cgcagggccg
      181 ccttcttccc atgcgccagc attccgagga cggtccattc cgaggtccca gcgggaaact
      241 cgtaaactcc ggcatgcacc gtccggtcta ccccgcgaat gcgcgccatc agcttaaacc
      301 accgggggtg agtaatgacg ccgtgggcct tcaggctgtc ggtcacagcc ccgaaggggc
      361 tgccgggcgg cagaatcacc cgcgcggatt gcgccgagga tccgcaagcg agaatgctca
      421 gagcggaaag gatggaaaca gcggcaagtg cggaacgtct tgcacggctc gacggcaggc
      481 cgagaggtaa tctgctcacc taccagctcc ttccgccggg tccgccgcgt ttcgtcgagc
      541 gtcgaggaaa tgctgcagca acacggacgc ggccagcgca tccacctcgg ccttccgtcc
      601 tcgggtgctt cctccctgcg cctggattgc acccaacgcg cgggcagtgc tcatccgttc
      661 atcccacagc tcgaccggca ggccggtgtg gctggagatg gcggtcgcga cgtcccgcgc
      721 ggcggcagca cttgctgctt cactgccttc gagtgttagg ggaagaccga cgacgaaacc
      781 caccggtgag tgagtggaaa ccagcgccag gaaacgattc atggggaatc gcttgccggc
      841 gcggcgtacc aacgtatcca atggactggc cagagtttgg gtctcgtcgc tgagggcaag
      901 tccaatgcga acttctcccc aatcaattcc cagaatccga cccgatgttg ggatcattcc
      961 tgaaggtaaa acggagagga cggacctacc tttccgccct ctccgctttc ggctgtgtcc
     1021 gcccgcctcg ccttactgcg ccatcgtggc gaagaactcc ttgttgttct tg
//
LOCUS       DASRPQ010000981         1189 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3563936, whole genome shotgun sequence.
ACCESSION   DASRPQ010000981 DASRPQ010000000
VERSION     DASRPQ010000981.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3563936"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..495
                     /gene="bshC"
                     /locus_tag="VFD73_11135"
     CDS             <1..495
                     /gene="bshC"
                     /locus_tag="VFD73_11135"
                     /inference="COORDINATES: protein motif:HMM:NF021586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis BshC"
                     /protein_id="HZI74548.1"
                     /translation="WSGVLVEPRVDRVLRKFDIDLMDLLQPPGALEARLVRSQLPDQA
                     SRALDSLRQALASGYDELARSAGDIDPTLTRPVQGAKHQAVSSLQDIERKLIQHLKRR
                     QETELGQLAKARTLVHPEGQPQERLLTVAPFLARYGPTLIAELLETIEGWYASALEGA
                     LHPS"
     gene            505..786
                     /locus_tag="VFD73_11140"
     CDS             505..786
                     /locus_tag="VFD73_11140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74549.1"
                     /translation="MSVIALLLFVALLIPIIGILVDSPIGRAMARRLEGPEQPSSGMS
                     DLSKRVELLENEVDDLMRSVQTLQEENAFLQRLLGDPSQRVTLPPPPGP"
     gene            813..>1189
                     /locus_tag="VFD73_11145"
     CDS             813..>1189
                     /locus_tag="VFD73_11145"
                     /inference="COORDINATES: protein motif:HMM:NF015013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HZI74550.1"
                     /translation="MVAAGILLSRIVGLVRNRVFAHYLGTSDAADAFNAAFRIPNFLQ
                     NLFGEGVLSASFIPVYARLLAREQTEDARRVASAVFSILALATSLLVVVGVLLTPALI
                     AVIAPGFTGEKRESTIRLVRILFP"
BASE COUNT          202 a          391 c          358 g          238 t
ORIGIN      
        1 tggtccgggg tattggtgga acccagggtg gaccgcgtgc tccggaaatt cgacatcgat
       61 ctgatggatc tgctgcagcc gcccggcgcc ctcgaagcac gtctggtccg ctctcaattg
      121 ccggaccagg cttcccgcgc attggactcg ctgcggcagg cacttgcctc cgggtacgac
      181 gagctcgctc ggagcgccgg tgacatcgat cctaccctga cccgtcccgt gcagggggcc
      241 aagcatcagg ccgtttccag tctccaggac atcgaacgca agctgatcca acacctgaaa
      301 cggcgtcagg aaacggaatt gggacagctc gcgaaggcca ggacactggt tcaccccgag
      361 ggccagcctc aggaacggct gctcaccgtg gcaccgttcc tggcccgtta tggtccgaca
      421 ctgatcgccg agctgctgga aacgatcgag ggatggtacg cgtctgccct tgaaggggca
      481 cttcaccctt catagactcg acccatgtca gtgatcgcgc tcctgctctt tgtcgcgctg
      541 ctcattccga tcatcggaat cctggtggat tctcccatcg gccgggccat ggcccgtcga
      601 ctggagggcc cggagcaacc ctcgagcggc atgagtgact tgtcgaagcg agtcgagctg
      661 ctggagaacg aggtggacga cctcatgcgc agtgtgcaaa cgcttcaaga ggagaacgcc
      721 ttccttcagc ggcttctggg agatccatcg cagcgcgtca ccctcccacc accgcccggt
      781 ccctgaccga caggtccacg cgtcccgcgg caatggtggc cgcggggatc ctgctcagcc
      841 ggatcgtggg actggtccgg aatcgagttt tcgctcacta ccttggcacc tccgatgcgg
      901 cagacgcatt caacgccgcg ttccggattc ccaacttcct gcagaacctg ttcggagaag
      961 gcgtgctctc cgcctccttc attccggtct atgcccggtt gctcgcccga gagcagaccg
     1021 aggacgctcg tcgcgtcgcg agtgctgtgt tcagcatttt ggcgctggcc acctcccttc
     1081 tggtggtggt tggagtgctg ctcacgcctg cgctgatcgc ggtcattgct cctggtttca
     1141 ccggcgaaaa acgggagagc accatccggc tcgtgcggat tctctttcc
//
LOCUS       DASRPQ010000982         1548 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2936399, whole genome shotgun sequence.
ACCESSION   DASRPQ010000982 DASRPQ010000000
VERSION     DASRPQ010000982.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2936399"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..706
                     /locus_tag="VFD73_11150"
     CDS             <1..706
                     /locus_tag="VFD73_11150"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZI74551.1"
                     /translation="TKGLMVTPEDSLRQWIGAADSAGLQAAVHAIGDRANGVILDIYD
                     SLARAHGPRDRRFRIEHAQHLRPSDIQRIARSGVIASMQPYHAIDDGRWAEKRIGPER
                     IKTTYAFRSLLDAGAHLAFGSDWTVAPLDPILGIYAAVTRRTLDGKHPEGWVPEQKIT
                     VEEALRAYTTGNAYGVFAERQRGMLKPGYLADVTVLSQDLTAIPPEEIEHVGIHATVV
                     GGKIVFEPTGRQAATR"
     gene            870..>1548
                     /locus_tag="VFD73_11155"
     CDS             870..>1548
                     /locus_tag="VFD73_11155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74552.1"
                     /translation="MTLSRAITGLSCSLITWSVFGNVPLAAQLSAPGVGAPAADVSYE
                     QRYREFQDLKPLPDGVASVAGLTLSRDVGRFRFESGNFYRLAPIGGRTVGLVFLGSGV
                     FSFTPPTPIERERLSHFQKSDSLQAPFSSLVLFFADTTLQELQSKLHFGAGSIPGDVR
                     QRITSSLDLLGDDDSQSLDPDLMSVLLNDESSGVFYATIGRTSGSPLVFVVNPHEVEG
                     VSLLQRVR"
BASE COUNT          285 a          490 c          475 g          298 t
ORIGIN      
        1 caccaaaggc ctgatggtca cgcccgagga ttccctgcgc caatggatcg gcgccgccga
       61 ttcggcgggc ctccaggcgg cggtgcacgc catcggtgat cgagccaacg gagtgatcct
      121 cgacatctac gacagcctgg cgcgggcgca cgggccgcgc gaccgccgtt ttcggattga
      181 gcacgcccag catctccggc caagcgatat ccaacgcatt gcgcggagcg gagtgatcgc
      241 gtcgatgcag ccctatcatg ctatcgacga cgggcgctgg gcggagaagc ggatcggacc
      301 ggagcggatt aagaccacct atgccttccg ctcgctgctc gatgccggcg cccacctggc
      361 gttcggctcc gactggactg tcgcaccgct cgatcccatc ctcggtatat acgccgcggt
      421 cacccgccgg actttggatg gcaaacatcc cgaggggtgg gttccggaac agaagatcac
      481 ggtggaggag gcgttgcggg cctataccac aggaaacgcc tacggggtgt tcgccgagcg
      541 gcagcggggg atgctcaagc caggttacct ggccgatgtc accgttctga gtcaggattt
      601 gacagcgatt ccgcctgagg agatcgagca tgtgggtatc cacgcgaccg tggtcggcgg
      661 gaagatcgtt ttcgaaccca ccggacggca ggcggcgact cgttagctaa gcggctgatg
      721 gaaagtacgt tagtgcacag atgctgtgtt agcaggagac cgtagtcgcg acgtatactc
      781 ccatattatc cacttgaccg acccgcagtc gctggtgatc ttccggtccc cgatcctgtc
      841 aaatagctga tacaaccgct gaggcccaga tgactttgtc gcgggcgatc acggggctgt
      901 cgtgcagcct cataacctgg agtgtgttcg ggaacgtccc attggcagct cagctcagcg
      961 cacccggcgt aggggcaccg gcagccgatg tgtcgtacga acagcgctat cgcgagttcc
     1021 aggacctaaa gccgctgccc gacggcgtgg cctccgtggc cggactgaca ctcagccgcg
     1081 acgtcggccg gttccgattc gagagcggga acttctaccg tctcgcccca atcggcggcc
     1141 gcacagtggg gctggtgttc ctgggctccg gtgtcttctc cttcactcca ccaaccccga
     1201 tcgagcggga gcgtctgtcc cacttccaga aatccgattc tctacaagcg cctttcagca
     1261 gcctggtgct gttctttgcc gacaccactc tccaggaatt gcaatcgaag ctccacttcg
     1321 gcgccggttc catccccggc gatgtgaggc agcggatcac gtccagtctc gatcttctag
     1381 gggatgatga cagtcaatcc ctcgatcccg acctcatgag cgtgctgctc aatgacgagt
     1441 ccagcggcgt cttctacgcg actatcggac gcaccagtgg gtcaccactg gttttcgtgg
     1501 ttaaccccca tgaagtggaa ggcgtgagcc tcctgcagcg cgttcgcg
//
LOCUS       DASRPQ010000983         1352 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3880775, whole genome shotgun sequence.
ACCESSION   DASRPQ010000983 DASRPQ010000000
VERSION     DASRPQ010000983.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1352
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3880775"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            375..875
                     /locus_tag="VFD73_11160"
     CDS             375..875
                     /locus_tag="VFD73_11160"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HZI74553.1"
                     /translation="MSSDAIVVLKADHKEIRHLFRKFQAAGDQAVKKKSKIVGQIIEL
                     LTVHTYIENEVMYPEVCALLPDLKDDVLESYEEHHVADVLCMELAGMPPGAERFDAKA
                     SVLIENVTHHIEEEEQDWFPKVRAGLGRKQLQELGARLERAREKAPRSPAQPSALKKT
                     VDAVIP"
BASE COUNT          260 a          423 c          445 g          224 t
ORIGIN      
        1 agtgcgatgg tcagcagtag ccaggtccgc agccgggcag atagcaaaac ccacatgctc
       61 agcgtccctt cttcttctcc cagcctggag gcctgcccct ggccgcccgg cgctgatgtg
      121 cgggacttat tacggcactg agctgttaat cagtggcgtt gctggtagcc aggttggcgc
      181 acagcatgtc ccatgttgtc ttcgcggcgc tacccgccac gcgccgcact aatcaccacc
      241 cgatccgggc taatcgccgc attcagcgct catgccagct actgctgaga gccggcgtgg
      301 gcctggcgcc ggggtttgct ggcagggctg atgggtagcg cccgcgggtg cccaagcgag
      361 tcgagaggag cagcatgtca tctgatgcca tcgtcgtact gaaggccgat cacaaggaaa
      421 tccgccacct gttccggaaa ttccaagccg ctggtgatca ggcggtcaag aagaagtcca
      481 agatcgttgg gcagatcatc gagctgctca cggtgcacac ctacatcgag aatgaggtga
      541 tgtaccccga ggtttgcgcg ctgctccccg acctcaagga cgacgtgctg gagtcctacg
      601 aagaacatca cgtggccgac gtcttgtgca tggagctggc gggcatgccg cccggggcgg
      661 agcgcttcga cgccaaggcc tcggtgctga tcgagaacgt cacccatcac atcgaggagg
      721 aagaacagga ctggttccct aaggtgcggg ctggcctcgg ccgcaaacag ctgcaggaac
      781 tcggggccag gctggagcgg gcccgggaga aagcgccgag gtcgccggcc cagcccagtg
      841 cgctgaaaaa gacggtcgac gccgtcatcc cctgaccggg cagtacgctc gccccggcgc
      901 aaatgatgga gccgctcgcc tcgtttcggc gcaggcctgc ccgaggggca tcatgcctct
      961 ttggcatgac gctgcccgcc ccgtgatcgt gctgggagca cctgcacgtg gccccgatcc
     1021 ttgcccggac acggcataga tcgcccgtga cgagtaggcg cgccttgtga cgcacagggg
     1081 atgagattcg catccgcccc atcccgggat ttcaggtgtg ggcgtcggcc tggtttgttc
     1141 cggtgagcac gggtagctcg ccggagtcgg gtcttcgggc gggacagagc caacgacgga
     1201 cacaggtatg aaagaactac aaacacaagc aacccacaga cgagggacgg gccagcgagg
     1261 ccctggtcat gaccggggac ctgaccgcca gggcgaagat tcttcagcca cctggccgcg
     1321 gcacgatagg cgtccagcac atgcgggggt ag
//
LOCUS       DASRPQ010000984         1921 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4516262, whole genome shotgun sequence.
ACCESSION   DASRPQ010000984 DASRPQ010000000
VERSION     DASRPQ010000984.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1921
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4516262"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..693
                     /locus_tag="VFD73_11165"
     CDS             <1..693
                     /locus_tag="VFD73_11165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74554.1"
                     /translation="TGMDKVQQVSEHVNMILRYIPYIQTNFVMGLDGDMGPEPFELTK
                     KFIDLSPGAFPAYSLLSAFGRAAPMNLDYQRAGRVIPFPFHFLNNNHAMNVRPKNYSW
                     PEFYDGLVDVTRYSFSWKAIARRIPATATAIPKWMNVVRAVSSEGFGRIRYHQTIRRL
                     LDTDRSVRAFLEGETERIPDFYTERIRRELGPAYQFLPAGALSHDPNAYLKATTEPAL
                     GATVQLSRPLVT"
     gene            complement(694..933)
                     /locus_tag="VFD73_11170"
     CDS             complement(694..933)
                     /locus_tag="VFD73_11170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74555.1"
                     /translation="MPGTIREARLRPEFAALYPGVEAGVWLPATTVGQKLLLWHLATA
                     ATPQGERLMAEEHFEFRGGRGAESRNGARTRVNDL"
     gene            complement(1070..>1921)
                     /locus_tag="VFD73_11175"
     CDS             complement(1070..>1921)
                     /locus_tag="VFD73_11175"
                     /inference="COORDINATES: protein motif:HMM:NF019311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PA14 domain-containing protein"
                     /protein_id="HZI74556.1"
                     /translation="EYMLLPRLLALSEALWSPRKARNWDRFLARLPMQFTRLDALGLE
                     YRVPEPIGLGWDSLQLQDRFRVTLRSPLANGSIRFTTDGSDPTSGSALYTAPFELRVG
                     PSPVTVSARLFLPNQRRSPVARGRITQATWHQPVTLRSEALEGGLAYAYFEAEFHSSD
                     EINGATPVRVGTVPEVGLRGDERPENYGVKLSGFVCVPKDAFYTFYLSSDDGARVRIA
                     GALVIDRDGPQRGSENPGHIALRAGCHPLKVVFFQATGPARLHLEVSAPDLHKGPVPR
                     QWYSHLQ"
BASE COUNT          374 a          616 c          577 g          354 t
ORIGIN      
        1 accggcatgg acaaggtgca gcaggtctcc gagcacgtga acatgattct ccgctacatc
       61 ccctatatcc agaccaattt cgtgatgggc ctggacggcg acatgggacc ggagccgttc
      121 gagctgacca agaagttcat cgacctctct ccgggcgcct tcccggccta ttcgctgctc
      181 tccgcgttcg ggcgagccgc gccgatgaac ttggattacc agcgggccgg tcgggtcatt
      241 cccttcccct tccacttcct caacaacaac catgcgatga acgtccggcc caaaaattac
      301 tcgtggccgg agttctacga cgggctggtc gacgtcacca ggtactcgtt ctcctggaaa
      361 gcgatcgccc ggcggatccc cgccaccgcg actgcgattc ccaagtggat gaatgtggtg
      421 cgtgcggtgt cgtcggaggg gttcggccgg atccgctatc atcagacgat ccgtcgcctg
      481 ctcgacacgg accgttcagt gagagcgttc ctagaaggag agaccgagcg gattccggac
      541 ttttacactg aacggattcg acgcgaactg ggaccggcat accaatttct gccggctggg
      601 gcactctctc acgaccccaa cgcatatctc aaggcaacga ccgaaccggc actcggcgca
      661 acagtgcagc tgagccgtcc cctggtcact taattagaga tcgttgaccc gggtccgagc
      721 tccgttccgg ctctctgctc cgcgtcctcc tcgaaactcg aaatgttcct cggccatcag
      781 tcgctccccc tggggggtcg ctgccgtggc cagatgccag agcagcagct tttgtccaac
      841 agtcgtggct gggagccaga cgccggcctc gacccccgga tagagtgccg cgaactcggg
      901 gcggagccga gcctcgcgga tggttcccgg catcgagcct ccttcctgca ttggagtcat
      961 tgggaggacg acctacgctc agaccctgtg cgtcatcggt gcaacgtcga agccgcgctt
     1021 acgctaggtt ggccttaatg gtcgccgaaa ttcgcgactt cgcaagagtc tactgcaggt
     1081 gggaatacca ttgcctcggg actggtccct tgtgcaggtc cggggcggaa acctcgagat
     1141 gcaaccgggc cggccctgtt gcctgaaaga acaccacctt caggggatga cagcccgccc
     1201 ggagcgcaat gtggcctggg ttttcgctgc cgcgctgcgg cccatcgcga tcaatgacga
     1261 gagcaccggc gatacgaacc ctggcaccat cgtcagagga caagtagaag gtgtagaagg
     1321 cgtccttcgg gacacagacg aaccccgaca actttacccc gtaattctcg ggccgctcat
     1381 cgccccgaag tcctacctcg ggtactgtac cgacccgcac cggtgtagct ccattgattt
     1441 catcggaaga gtggaactcc gcctcgaagt acgcgtaggc tagtcccccc tccagcgcct
     1501 ctgagcgaag cgtcaccggc tggtgccagg ttgcctgggt gatccggccc cgcgccactg
     1561 gactccgacg ctggttgggc aggaacagtc tcgcactcac ggttacagga gaggggccga
     1621 cccggagctc gaaaggagcc gtatacagcg cggagccgct ggtgggatcg gatccatcgg
     1681 tggtgaaccg gatcgagccg ttggccaagg gagatcgtag tgtcacccga aatcgatcct
     1741 gcaactggag agagtcccag cccagcccaa tcggttccgg caccctgtat tcgagcccga
     1801 gcgcatcgag tctggtgaac tgcatcggca gccgagcgag gaaacggtcc cagtttcgcg
     1861 cctttcgcgg cgaccagaga gcctcggaga gcgcgaggag ccgcggcaag agcatatact
     1921 c
//
LOCUS       DASRPQ010000985         1093 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1055931, whole genome shotgun sequence.
ACCESSION   DASRPQ010000985 DASRPQ010000000
VERSION     DASRPQ010000985.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1055931"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..435)
                     /locus_tag="VFD73_11180"
     CDS             complement(<1..435)
                     /locus_tag="VFD73_11180"
                     /inference="COORDINATES: protein motif:HMM:NF020496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HZI74557.1"
                     /translation="MIRRTGASAIRFEATLHTIDKWTIVRLPEKASAKLPSRGQVAVQ
                     GTIDGHEFQTVLEPDGCSGHWMRVDEKLQRTAAISAGDTATVEIEPARDWPEPDVPQD
                     LETALVAAPQKIQDLWNDITPMARWEWVRWVNATKNPDTRRRR"
     gene            571..882
                     /locus_tag="VFD73_11185"
     CDS             571..882
                     /locus_tag="VFD73_11185"
                     /inference="COORDINATES: protein motif:HMM:NF019982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI74558.1"
                     /translation="MTSLLACAIDLTRIGKTSFAIGPFDAFSRARSVGCPTLIISGSE
                     DALTRPWMANELTNAMGGHARLVSLPGVGHNDMLRSGERLWNVVEDFLNSAANPGGCP
                     T"
BASE COUNT          181 a          349 c          339 g          224 t
ORIGIN      
        1 tcgccgtctt cgcgtgtcag ggttcttggt tgcatttacc cagcgaaccc actcccagcg
       61 cgccatcggc gtaatgtcgt tccataggtc ctggatcttc tgaggggcag ccaccagggc
      121 tgtctcaaga tcctgtggca cgtccggctc cggccagtcc ctggctggct cgatttcgac
      181 cgttgccgtg tcacccgcgc ttatggccgc ggttcgctgc agcttttcgt cgaccctcat
      241 ccagtggcct gaacagccgt cgggttccag cacggtctgg aactcatggc catcgatcgt
      301 cccttgcacg gccacctggc cgcgcgatgg aagcttcgcg cttgctttct cgggcaaccg
      361 cacgatagtc catttgtcga tggtgtgcag cgtggcctca aagcgaattg ccgaggcccc
      421 tgtgcgccga atcatcgatt cattataccg aagggattac gcctcagccg gcccgcggtc
      481 ccatgcgggt gaggctggtc cctcggaagc gcagtagcaa tcgatcttgc cagccgccgc
      541 gacataagag cgcaaatact gctgagccca atgactagcc tgcttgcctg cgcgatagac
      601 ctgacccgca tcggcaagac ctcattcgcc attggcccgt tcgacgcttt ctccagggcc
      661 aggagcgtcg gctgcccgac tctgatcata agcgggtcag aggatgcgct cacacggccc
      721 tggatggcaa acgagctgac caatgccatg ggaggccatg ctcggctggt cagcctgccc
      781 ggcgtcggcc ataacgacat gctgcggtca ggcgagaggc tgtggaatgt tgtggaggat
      841 ttcctgaact ctgccgccaa cccgggtggc tgtcccacct gaccgctctc ctgccgtctt
      901 cctcgcaggc gccggatcct tgcgagtgcg ggccaggtct aggctggcga agccatcgcg
      961 gagcgaggcc cagagggctg gacgaggacc agcggcccgc ctgtccaggg cgtgccgagg
     1021 tcacggcctg gagtggcttt gacctgggag tttacgggtg aggtcttcac gtttagggct
     1081 gacctggata aac
//
LOCUS       DASRPQ010000986         1008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1684793, whole genome shotgun sequence.
ACCESSION   DASRPQ010000986 DASRPQ010000000
VERSION     DASRPQ010000986.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1684793"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..770
                     /locus_tag="VFD73_11190"
     CDS             84..770
                     /locus_tag="VFD73_11190"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HZI74559.1"
                     /translation="MTIGFTGRTWSRTLALAVFSGVLALPAALYGQNAAGNTVPLESR
                     SKGSAKAPVTVYEMSDFQCPYCRQFALETFPQLDRAYIATGKVHWIFINFPLTSIHPH
                     AAAAAQVALCAANQKSFWRMHDLLFRNQEHWADQQEPGPFFLSLADSAGLAKPAMLAC
                     LQAPETANAVQADAEGAARSGAHSTPTFYIEGGLLEGAQPVAVFRQVLDSVYKMKTAG
                     KPADTAAVKR"
     gene            complement(815..>1008)
                     /locus_tag="VFD73_11195"
     CDS             complement(815..>1008)
                     /locus_tag="VFD73_11195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74560.1"
                     /translation="AVTAGALIFSLFHYIGPYGQPLRLDSFIFRTVAGLLFSGLYVTR
                     GFGITAWTHALYDVFLAMG"
BASE COUNT          201 a          318 c          305 g          184 t
ORIGIN      
        1 attggaatct tccgctggac gccgacacga tgctgctttc gagccggacc ggaaagcggc
       61 gccccaagta ttgaggaggt aggatgacga tcggcttcac tggtcggacg tggtctcgaa
      121 cccttgcgct cgcagtgttc agcggtgtgc tggcgctgcc ggcagctctc tacggtcaga
      181 atgccgcggg caatacggtt cccctggaga gccgaagtaa gggatctgcc aaggctcccg
      241 tgacggtcta cgaaatgtct gatttccaat gtccctactg ccgtcaattc gcactggaga
      301 cctttcctca acttgaccgg gcgtatatcg ccacgggcaa ggtccattgg atcttcatca
      361 actttccgct caccagtatc catcctcatg ccgccgccgc cgcccaggtc gcgctctgcg
      421 cagccaacca gaagagcttc tggcgaatgc atgacctgct gttccgaaac caggagcact
      481 gggccgacca gcaggagccg ggaccatttt tcctctcgct ggccgactcg gccggcctcg
      541 ccaagcctgc gatgctggcc tgcctccagg ccccggaaac agccaacgcc gttcaggccg
      601 acgccgaggg tgctgcccgc tcgggcgccc acagcacgcc taccttctac atcgagggag
      661 gtctgttgga aggcgcccag ccggtggcgg tgttccgcca ggtgctggac tcggtctaca
      721 aaatgaagac ggccgggaag ccggcggata ctgcggcggt aaagcggtag acccgaggac
      781 gctcaaggcg ttccccatcg ctccgtctct gcttttatcc cattgccagg aacacatcgt
      841 agagcgcatg ggtccaggcg gttatcccga agccccgagt gacgtagagg ccgctgaaca
      901 gaagccctgc gaccgtgcga aaaatgaatg agtcgagccg aagcggctgc ccataggggc
      961 cgatgtaatg aaagagggag aagatcagcg ctcctgcggt caccgcaa
//
LOCUS       DASRPQ010000987         3797 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1370297, whole genome shotgun sequence.
ACCESSION   DASRPQ010000987 DASRPQ010000000
VERSION     DASRPQ010000987.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3797
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1370297"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            115..2862
                     /locus_tag="VFD73_11200"
     CDS             115..2862
                     /locus_tag="VFD73_11200"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI74561.1"
                     /translation="MPAPALSERDLTVLRSFARRIDPSDAGAHNNLGVLYYQKGLIEE
                     AIGEFACALELDPKMQVAQANLEIAYRDSGHYDRRLDELRQRVTQHPTDRDVHWELGR
                     AYSMLGRHEEAVAEFESLLAAHPNDVPAMLQLGLAEKARGRLDAASDWLARACEKEPN
                     NPVARFHRGEVLYNRGLTELALVALKEAVANNPEYAEAHYLLAFVYGDLGQHEAARAA
                     SKRALSLNPMLGRAQANLALARGEAGKRGSGEAAANGQVRVDASQLRLDAGSSPPGVP
                     ASPQSVPGALLAHYNLGLALRQKGYYEESLREYQLGLDAGEDRRLNLQAMAEVHLLRR
                     DLNAALQLYDLLVKDYPDSPKLWNERGVCLHQSGHTAAAASSYEKAVEVDPAYQLAWN
                     NLGVLRSSATSPDASSAAFRRALSGSQPLLTARLNLGLLFLQRNQLKSALEEYQRALT
                     EQPASAVGWNGLGLVLVELRRYEDARNAFGRAIDVSSEFAAAHYNLSFVLSQLGDFDG
                     ALRETKRALELEPMYIPQKFSLTIDLQYEDPTIAIAPELVADVSGDELSGEFSFDPPA
                     LDQLFAELAPATPSAPAAPAEESLKGARELIAKGLLDLASNELTRASARGAAAGPTAV
                     LLGEIFAKRGLYGEALERFRQARTALPRDRDAALGEIKALLALNRAQEAAGLADDLAA
                     QQQADVEVLAARARVRLSLGDARGAVESVKQAQALAPRRPELYQLRAQASARLGDRAA
                     ALADFQTALELDPSLVRVWHELGALEEERHNWLAARDAYQRALDLLPTYAPAALALAD
                     LLRRTESAGAAIAVLVRLLEADPYELEALTALGQALLEDGRTMEALEAFARVLRFDPD
                     QAAALYHQGTGLARQRQFDQAVQVWERVIQLDPDGPFATEARSRARSARDLQHIFAGV
                     S"
     gene            2864..>3797
                     /locus_tag="VFD73_11205"
     CDS             2864..>3797
                     /locus_tag="VFD73_11205"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HZI74562.1"
                     /translation="MALEGPLKEFHIQDVFQLLDLGRKTGVLRVTSELRQTAASVTFE
                     RGGVVAATLGKNSQRFGARLVRAGKISAKDLDRALALQEKGDSRRLGDILVSIGAISR
                     RELDRQLKAQTEETILDLLSWTEGHFRFEEGATSEALVDTPLRIPTEGLLMESARRMD
                     EWSRIESKVPHLRVVPKLPPPDAPVNGKLDLVPLEWEVLAAVDGERDLHALADTLGRS
                     EFDVARTVYALAAAGVVVLEEHAGAGENARENGVSLGPARAALAKAEYEKAAHALQEV
                     LRTDPLMPEARRLFGLCQVALGRFRSAAETWSSWA"
BASE COUNT          637 a         1202 c         1300 g          658 t
ORIGIN      
        1 gacctcgttc cggatcgagg agaccagcga gccgctggga ggccattttc tccttctgcc
       61 ggacatggcc tcgctgcggg cgatcttcga cgccattcgc ctaccttagc tgccatgccc
      121 gcgccggcgc tctccgagcg cgacctcacg gtgctccgtt cctttgctcg gcggatcgat
      181 ccttccgatg ccggggcgca caataatctc ggggttctct actatcagaa ggggctgatc
      241 gaggaggcca tcggcgagtt cgcttgcgcc ctggagctcg acccgaagat gcaggtcgcc
      301 caggccaacc tcgagatcgc ctaccgcgac agcggccact acgatcggcg cttggacgag
      361 ctgcgccaac gggtcaccca acatccaacg gatcgggatg ttcactggga gctgggccgc
      421 gcctacagca tgctcggacg ccacgaggag gcggtcgcgg aattcgagtc gctgctggct
      481 gcccacccga atgatgtgcc tgcgatgctg cagctcgggc tggccgagaa ggcccgcggc
      541 cgactggacg cggcaagcga ctggttagct cgggcctgcg agaaggagcc caataatccc
      601 gtcgcccgat ttcatcgggg agaggtgctg tacaaccggg gactgactga gcttgcgctg
      661 gtggcactca aggaagccgt cgccaacaat ccggagtacg ctgaagcgca ttacctgctg
      721 gcattcgtct acggcgatct ggggcagcac gaggcggctc gggccgccag caagcgagcg
      781 ttatcgctga acccgatgtt aggacgcgcc caggcgaatc tggcgctggc ccggggggaa
      841 gcggggaagc ggggaagcgg cgaggccgct gcgaacggcc aggtgcgggt cgatgcgtcc
      901 caactccgat tggatgctgg ctcttcgcct cctggcgttc ccgcctctcc gcagtcggtt
      961 cccggcgcgc tgctggctca ctacaacctc ggtcttgctc ttcggcaaaa gggctactac
     1021 gaagagtcgc tccgagagta tcaactcggg ctcgatgccg gggaggatcg gcggctgaat
     1081 ctgcaggcaa tggcggaagt ccacctgctc cgaagagatc tgaacgcagc cctccagctc
     1141 tacgacctcc tggtcaagga ttatccggac tcccccaaac tctggaacga gcgcggggtc
     1201 tgcctgcatc agtcgggtca cactgccgcc gccgcttctt cctacgagaa agcggttgag
     1261 gtggacccgg cttatcagct tgcctggaac aaccttgggg tccttcgctc gagcgcaaca
     1321 tcacctgatg cgtcctcggc ggcgttccgt cgcgcgctga gcggatcgca accactgctc
     1381 actgcccgtc tcaatctcgg cctcttgttc ttgcagcgga accagctgaa gagcgcactc
     1441 gaggagtatc aacgggccct caccgaacag ccggcgagcg cggtgggctg gaacggtctc
     1501 ggtctggttc tggtcgagtt gcggagatat gaggatgcgc ggaacgcctt tggccgggcc
     1561 atcgatgtct cctcggaatt cgccgcggcg cactacaacc tgagcttcgt gctgagtcag
     1621 ctgggggatt tcgatggtgc cctccgggag accaagcggg cactcgagct ggagccgatg
     1681 tacatccctc agaaattctc cttgacgatc gatctccagt acgaggatcc caccatcgcg
     1741 atcgcaccgg agctggtggc cgacgtgagt ggggacgagc tcagtggtga gttcagcttc
     1801 gatcctcccg cgctggacca gctattcgcc gagctcgcgc cggcgacgcc ttcggctcct
     1861 gcggcaccag ccgaagagtc gctcaaggga gcgcgggagc tgattgccaa gggtctgctg
     1921 gatctcgcat ccaacgagct cactcgcgcc tcggcccgcg gtgccgcggc cggcccgact
     1981 gctgtgctac tgggcgagat cttcgcgaag cggggccttt atggtgaggc gctggagcgg
     2041 ttccggcagg cgcgcaccgc gctgccgcgc gatcgggatg ccgcattggg cgagatcaag
     2101 gcgctcctgg cgctgaaccg agcccaggag gccgccggcc tggccgacga tctggcagct
     2161 cagcagcaag ccgatgtcga agtgctcgcc gcccgggccc gtgtccggct gtcgttgggc
     2221 gacgcgagag gcgcggtcga gagtgtcaag caggcgcagg cactcgcccc caggcggccc
     2281 gagctgtacc agctccgggc gcaggcgtca gcgcgtctgg gagaccgagc agccgcactg
     2341 gcggactttc agaccgcgct cgagctggat ccttcgctgg tgcgcgtgtg gcacgagctc
     2401 ggcgctctgg aagaggagcg ccacaactgg ctcgcggctc gggatgccta ccagcgggcg
     2461 ctcgatctgc tgcccactta cgcccccgca gcgctcgcct tggcggatct gttacgccgc
     2521 accgaatcag ccggcgcggc catcgcggtg ttggttcggc tgctggaggc cgatccttac
     2581 gagctggagg cgctgacggc gctcggccag gcgttgctgg aggacggcag aacgatggag
     2641 gcgctggagg cctttgctcg ggtgctccga ttcgaccccg accaggctgc ggcgctctac
     2701 caccagggga ccggccttgc tcgccagcgg cagttcgatc aggcggtcca ggtatgggaa
     2761 cgagtgatcc agctcgaccc cgacggcccg tttgccacag aagcccgaag ccgggcccgg
     2821 tcggcccgag accttcagca cattttcgcc ggagtgagtt gaggtggcgc tcgagggacc
     2881 actcaaggag ttccatatcc aggacgtctt tcagctgttg gacctcggcc ggaagaccgg
     2941 agtgttgcgc gtcacctccg agcttcgtca aactgccgcg tcggtgacgt tcgaacgtgg
     3001 tggtgtggtg gccgcgacat tgggcaaaaa ttcccagcgc tttggggctc ggctggtgcg
     3061 ggcgggcaag atttcggcga aggacctcga tcgcgcgctg gcgctgcagg aaaagggcga
     3121 ttcacggcgg ctgggggaca tcctggtatc gatcggggca atcagccggc gcgagctcga
     3181 ccgccagctc aaggcccaga cggaagaaac cattctcgat ttgctgagct ggaccgaagg
     3241 ccacttccgc ttcgaggaag gggcaacgtc ggaggcgttg gtcgatacgc cgctccgcat
     3301 tcccacggaa gggctcctca tggagtcggc ccggcggatg gatgaatggt cgcgaatcga
     3361 atccaaggtg ccgcacttgc gggttgtgcc aaagctgccg ccaccggatg cgcccgtgaa
     3421 cggcaagctc gatctggtgc cactcgagtg ggaggtcctg gccgcagtcg atggcgagcg
     3481 cgacctgcac gcgctggcag acacgctggg ccgatcggaa ttcgatgtgg cgcgcacagt
     3541 gtacgcactt gccgctgcag gtgtggtcgt gctcgaggag cacgctggcg cgggtgagaa
     3601 cgctcgagag aacggcgttt ccctcggccc ggcccgagcc gcactggcca aggcggagta
     3661 cgagaaggct gcgcacgcct tgcaggaggt gttacgaacc gaccccctga tgcccgaagc
     3721 gcggcggctt ttcggattgt gtcaggtggc actgggccgc ttccggagcg cggcggagac
     3781 ctggagtagc tgggctc
//
LOCUS       DASRPQ010000988         1409 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3565392, whole genome shotgun sequence.
ACCESSION   DASRPQ010000988 DASRPQ010000000
VERSION     DASRPQ010000988.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1409
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3565392"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..582)
                     /locus_tag="VFD73_11210"
     CDS             complement(<1..582)
                     /locus_tag="VFD73_11210"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HZI74563.1"
                     /translation="MIYVCIPSYNEAPTIGLLLWKIRQVFAGFPREYQLLVLDDGSDD
                     PTAEVLERYTRVLPLTVVRHPERKGYAASIEELLRQAVNRTDRPKRDSAILMHADFAH
                     GPQFIPDLVRRIESGADIVIAEGKLEGEPSRSRRLVRRFAPVLLKGAVSLPGVSDVVS
                     GFAIFRLITLRNAFRNGPAPVLSTQGWAANTELY"
     gene            complement(579..>1409)
                     /locus_tag="VFD73_11215"
     CDS             complement(579..>1409)
                     /locus_tag="VFD73_11215"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI74564.1"
                     /translation="VLHAHDAHALTLASLSALVTRTPLVVTRRVTFPIRHRYFWRRAC
                     RIIAISRAIAEALLRDGMQPERVVVIPSAVDPGSLQSHPWDLRSALRLPATSQLAVHL
                     GALTPEKDQQTLLRAAARLVRDLPELHWVIVGEGRLRSALQREIVDLDLNERVHLMGA
                     LPDPDRALGQADVFVLSSLSEGLGSSALAAMAQGVPVVATRVGGLPELLEPGNGVLVE
                     PRDPTALAAAVARVLDDSGFRSNLIAAARTQAARFSVGPMADQLLTVYRSCAHSLGGS
                     "
BASE COUNT          295 a          443 c          452 g          219 t
ORIGIN      
        1 gtacagctcc gtattggcgg cccacccttg ggtactcagg acaggtgccg gcccgttgcg
       61 aaaagcgttt cgcagcgtga tcagccggaa aatggcgaat ccggagacca catccgacac
      121 tccgggaagc gacacggcac ccttcaacag gaccggcgca aatcgacgaa ccagccggcg
      181 gctgcgggag ggttctcctt ccagctttcc ctcggcgatc acgatgtcgg ctccgctctc
      241 gattcggcgc acgagatcgg gaatgaactg cggaccgtgt gcgaaatcgg catgcatcag
      301 gattgccgaa tcccgcttcg gacgatcagt gcggttgacc gcttggcgga ggagctcctc
      361 gatgctagca gcgtacccct tgcgctccgg atggcgcacc accgtgagcg ggagaacccg
      421 ggtatagcgc tcaaggacct ccgcagtcgg atcatccgag ccgtcatcga gcaccagcag
      481 ctggtattcc cggggaaagc cggcaaagac ctgccggatt ttccagagaa gaagcccaat
      541 ggtgggtgct tcgttgtagc tggggataca gacgtaaatc atgagccgcc aagagaatga
      601 gcgcacgaac gataaaccgt cagaagctgg tctgccatag gaccgaccga gaaccttgcc
      661 gcctgcgttc gggcggcggc aatgaggttg gagcggaagc cggagtcatc gaggacccgc
      721 gcaacggctg cagccaacgc ggtgggatcg cgcggctcga ccagcacgcc attcccgggc
      781 tccaggagct caggaagccc tcccacccgg gtagcgacca ccggcacgcc ctgcgccatc
      841 gccgccaacg cagagcttcc gaggccctcg ctcaatgagc ttagaacaaa gacgtcggcc
      901 tggcccagcg ctcgatcagg gtccgggaga gcacccatca ggtgaaccct ttcattgagg
      961 tccagatcaa cgatctcccg ctgcaatgcg gatcggagtc gaccttcccc cacgatcacc
     1021 cagtgaagct cgggcaagtc ccggaccagg cgggcggcgg ctcggagaag cgtctgctgg
     1081 tccttctccg gggtcaacgc cccgagatgc accgccagct gggacgtggc tggaagacgc
     1141 agcgccgatc gaaggtccca gggatgtgac tgtaatgatc cgggatccac tgctgatgga
     1201 atgacgacca cgcgctcggg ttgcatccca tcccgaagaa gcgcttccgc tatcgcgcgg
     1261 gagatcgcga tgatgcggca ggctcggcgc cagaagtagc gatgtcgtat ggggaaggtg
     1321 acacggcgag tgaccaccag cggagtccgc gtgaccaacg ccgacagact cgccagcgtc
     1381 agtgcgtgcg catcatgcgc gtggaggac
//
LOCUS       DASRPQ010000989         5758 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1685729, whole genome shotgun sequence.
ACCESSION   DASRPQ010000989 DASRPQ010000000
VERSION     DASRPQ010000989.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5758
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1685729"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..1153)
                     /gene="asnS"
                     /locus_tag="VFD73_11220"
                     /pseudo
     CDS             complement(1..1153)
                     /gene="asnS"
                     /locus_tag="VFD73_11220"
                     /inference="COORDINATES: protein motif:HMM:NF012379.4"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004816 - asparagine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006421 - asparaginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
     gene            1172..2245
                     /locus_tag="VFD73_11225"
     CDS             1172..2245
                     /locus_tag="VFD73_11225"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HZI74565.1"
                     /translation="MGLRRGAFSLALLLGSVNAACVNLRPPPMPIAANVAGQVPTTVW
                     TRRAGRRFTAPVQMADSTLYGGSIDRKVYAVSTNSGDVRWSARMPGMIVGGVVLAGDT
                     IFVASARPQGRVSALRAKDGRQIWRVTTPPIGAPLASIDGQLIAVSERGEVIALDPRN
                     GKVHWRRGVGVTRIAAVPAGPGTLLLTTTDSLVRLNSDSGKVLQRAPSPGTILSPWIA
                     RDSALIAGTADSQVVSVDPHSLRLNWTLRVDAPVLDSPAALADTLFVATRRGTLYRID
                     PGPGPTLKMIASLDWPITAPPSIVDREVLLGGADGVIRAVRTNGREVWRVRVWRPVEL
                     SPITLEDGLIALGGNGDLHRYRQ"
     gene            2314..2691
                     /locus_tag="VFD73_11230"
     CDS             2314..2691
                     /locus_tag="VFD73_11230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74566.1"
                     /translation="MKYGKWVLVAGAAGMNYLALRAHNRAEDSFDALESRCLTAHEHC
                     TVGPQGKYLDPVSEGLYQGSLRYDRIARGWLIGGESTLAGATVLFIWELAQPKGRPGN
                     IPFEPEIRSMPGGTTGLGLRVAF"
     gene            complement(2707..4794)
                     /gene="recG"
                     /locus_tag="VFD73_11235"
     CDS             complement(2707..4794)
                     /gene="recG"
                     /locus_tag="VFD73_11235"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF008168.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HZI74567.1"
                     /translation="MPTSSTQHPSRLDTPVQFLKGIGERRAEALARLGVRTARDLLWH
                     LPHRYIDASALTPLARAELGQEVACVGRVVAKGVLPTRRGLRIFHAVLRDESGLLECV
                     WPGQPFLDRTIAVGQTLLVSGPVRFYHGRQLAPREYIILADAEGDADPVGAGKVLPVY
                     PATEGLSHKVIRSLIERHLDGLIALTDDPLPEQQRRALDLLPLRDALIAVHRPASVDQ
                     AERGRRRLAFDELLDLQLMLIRARVLAKRQRSGVAFQIKRELTTKLKDSLPWHLTDDQ
                     QRAIREITADMTAPERMHRLLMGDVGTGKTVVALFSMLLALENDFQAALMAPTELLVE
                     QHGATLSALLEPLQLKPELLLGRQSQSEKAAVRRRLASGQARLAVGTHALLQEGVAFR
                     RLGLVVIDEQHRFGVEQRAALIGKGAAPDVLLLTATPIPRSLALTLYGDLDVSTLKTK
                     PPGRGSVRTAVRSSRQRETVLDFVRSQCLEGRQAYVVLPVIDETERADLRAASTMVQT
                     LAARWPDLQVGLVHGRMKPEERDEIMRRFRGNELHVLVATTVIEVGIDVPNATVMLIE
                     HPDRFGLAQLHQLRGRIGRGAQESYCILLGEGPVPDRLHGFAATQDGFKIAEMDLAER
                     GMGDLIGARQSGGFELRHARLPADEDLLARARELATTIIEGDPVLQRRENQRLRERAV
                     GRYPRAVELFRVG"
     gene            complement(4800..>5758)
                     /gene="ftsY"
                     /locus_tag="VFD73_11240"
     CDS             complement(4800..>5758)
                     /gene="ftsY"
                     /locus_tag="VFD73_11240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HZI74568.1"
                     /translation="HGTENVKSNRLGSSEKTSVWARIKRIALTDVGALMRGLNADDIE
                     NLERVLIEADFGVSATVELTQALEDEVRRGKIKTEADLKRSLQQRLVRLLDSTGTEGA
                     VARADSGPTVILLIGVNGTGKTTTAAKLAWRLQQEKRKVLLAAADTYRAGAIAQLQVW
                     ANRLNVPCVSGAPGGDPAAVAFDAVDAAVSRELDTVIVDTAGRLHTQEGLMDELRKIT
                     RVIGRRLPGAPHEVFLILDGTVGQNAVQQGKLFSQAVVPTGIVVTKLDGSARGGAVAA
                     LRKELDLPIRFVGLGESVEDLTPFDAERFAENLLAEAPVEAS"
BASE COUNT         1040 a         1875 c         1797 g         1046 t
ORIGIN      
        1 accagcgata ggcttccggg tcgagtccct gctcttgaat tcgggccagg agtttatcgt
       61 aactatcctc ccgttgggat ccgccgataa tctctccgta gccttcggga gccaggcagt
      121 cgttgttcag gactgtccgg gggtcttccg gattctcctt catgtagaag gccttaacct
      181 ccttgggata gttgtagacg aaaacaggcc ggtcatattg ctgggccagg agcgtctcat
      241 catcaccccc cagatcgctt ccccaggtga tgtcagatcc caactcgttg agacgtgcca
      301 cggcgtcact gtaggagatc cgcgggaacg gcggctgcac tcgctccagc ggcgcggtat
      361 cccgttcgag ctccttcaac tcctctcggc gccggtccaa tgctctgctt acaatggcag
      421 agacgaagtc ctgctgcagc cgcatgttcg tgtcggagtc gttgaacgcc acctcaggct
      481 cggtcatcca gaattcggtc agatgacgcc gggtcttgta tttctaggcc cgaaaggtgg
      541 ggccgaagca atagaccttc cccagggctg ccgcggccgc ttcgacgtag agttgtcccg
      601 tctgtgccag ataggccttc ccgatgtcga agtaatcggt cgcgaacaga tttcccgcct
      661 cttcgccaat ggctccggtg aggatcgggg tatcgaccag aatgaatccg cgctgataga
      721 agaaatctcg gatagcctgc accacctcgt ggcgtactcg ggccacggcc gcctggcgac
      781 ggctccggag ccaaaggtgt ctatgctcga acaggaaagt cgtcccatgt tctttaggac
      841 cgatcggata gtctgggctg gctcccagca gttccagcgt ctgaactgct agctcatacc
      901 cacccggcga gcgtggctcc gcccgcacga caccggtcag ccgaacgctg ctctcctggg
      961 tcaagccggt aaacgtggac caggtactct ccggcacgtc cttcttggaa agaacacctt
     1021 gcacgtaccc cgagccgtcg cgcaccacga caaacgcaat cttgccgctc gagcgggtag
     1081 tcacgaccca cccgcgaacg ctcaccgttt gaccgacgtg tgcgtgaagg ccgctgatgt
     1141 ctaccgcatc catcctggat ccgctggggg aatgggcctg cgtcgaggag cgttcagtct
     1201 agccctgctc ctgggaagcg tcaacgcggc ctgcgtgaac ctccgtccac ctccgatgcc
     1261 catagcggca aacgttgcag gccaggtgcc gaccacggtg tggacccgca gggcggggcg
     1321 ccgcttcacc gcaccggtcc agatggcgga tagcacgctc tatgggggaa gcatcgaccg
     1381 gaaggtctac gcggtcagca ccaacagtgg cgatgtacgc tggtcggccc ggatgccggg
     1441 aatgattgtg ggtggagtag tgctggccgg cgacaccatc ttcgtggcca gcgcgcggcc
     1501 ccagggtcgc gtcagcgccc tccgcgccaa agacggccgg cagatctggc gcgtgaccac
     1561 cccacctatc ggggctccgc tggcatcgat cgatgggcag ctcatcgcgg tcagcgagcg
     1621 cggtgaggtc attgcactcg atcctcggaa tggcaaggtg cattggcgcc gtggagtggg
     1681 tgtgactcga atcgcggccg tgccggcggg acccgggacg ttgctcctga cgaccaccga
     1741 ctcactggtt cggttgaaca gcgacagcgg caaagtgctg cagcgggcac cgtcgccggg
     1801 gaccatactc tcaccgtgga ttgcgcgcga tagcgcgctc atcgcgggga cggccgactc
     1861 gcaagtcgtc tcggtagacc ctcacagctt gcgactcaac tggacgctga gagtcgacgc
     1921 tccggttctg gactcgccgg ccgccctggc cgacactctg ttcgtcgcga ctcggcgcgg
     1981 cactttatac cggatcgatc ccgggcccgg gccaacactg aaaatgatcg cgtcgctgga
     2041 ctggccgatc acggcccctc ccagcatcgt cgaccgcgag gtcttgctgg gtggcgctga
     2101 tggagtcatc cgggcagtcc gaaccaacgg ccgggaggta tggcgggtgc gggtctggcg
     2161 gccagttgag ctgagcccca tcacgctgga agacgggctg atcgccctcg gcggcaacgg
     2221 ggatttgcac cggtaccgcc aatgaagcga atgggctggg tactactcgc gttatgctgg
     2281 ttcagcaccc gggcccaagc ccaaggccca ctcgtgaaat acggcaaatg ggtgctcgtg
     2341 gccggggctg cgggaatgaa ctatctggcc ctgcgagccc ataaccgagc agaagattcg
     2401 ttcgatgctt tggaaagtcg ctgcctcaca gcgcacgaac actgtactgt gggcccacag
     2461 ggaaagtatc tcgatccggt cagcgagggt ctctaccagg gatcgcttcg ctacgaccga
     2521 atcgcgcgtg gttggctcat tggaggagag tcgaccctgg ctggcgcgac tgtgctcttc
     2581 atctgggagc tggcgcagcc caagggtcgg ccgggcaaca ttcccttcga gcccgagatc
     2641 cgcagcatgc caggcggaac aacggggttg ggtctgcgag tcgccttcta gaacgaggtc
     2701 ggccggctag ccaaccctga acagctcgac ggcccgggga taccggccga cggcacgttc
     2761 ccgaagccgc tggttctccc gccgctggag taccggatcg ccttcgatga tggtcgtggc
     2821 aagctcccgg gcgcgcgcca gaagatcctc gtcagcgggc agacgagcat ggcggagctc
     2881 gaaccctccc gactgccgcg cgccaatcaa gtctcccatc ccccgctcag caagatccat
     2941 ctccgcaatc ttgaatccat cctgagtcgc cgcaaagccg tgcagtcgat cgggaaccgg
     3001 accttcgccg agcagaatgc agtaactctc ctgggcccct ctcccgatcc ggccgcgcag
     3061 ctgatgcagc tgtgccagac cgaatcgatc ggggtgctcg atgagcatga cggttgcgtt
     3121 gggaacatcg atgcccacct cgatgacggt cgtggcgacc agcacgtgca gctcattccc
     3181 ccgaaaccgc cgcatgatct cgtcccgctc ctcgggcttc atccgcccat gcaccaggcc
     3241 aacctgcaga tccggccacc gggcggcgag cgtctgcacc atggtgctgg cggcgcggag
     3301 atcggcgcgc tcggtctcgt cgatcaccgg aagtaccacg taagcctgtc ttccctccag
     3361 gcattgcgac cgaacgaagt ccagcaccgt ttcacgctgc cggctgctcc gtaccgcggt
     3421 gcggacgctc ccccggccgg gcggtttggt tttgagagtg gaaacatcga gatccccgta
     3481 cagcgtcaat gccagggagc gcgggatcgg tgtggcggta agcagaagaa catcgggagc
     3541 ggcgcccttg ccaatcagag cggcccgctg ctccacgccg aagcggtgct gttcgtcgat
     3601 gaccaccagg ccaagccggc gaaaagccac gccttcctgc agcagcgcgt gagtccccac
     3661 tgccagccga gcctgcccgc tggccagccg tcttcgcacg gcggcctttt cactctggct
     3721 ctggcgaccg agcaggagtt ctggttttaa ctgcaacggt tcgagcaaag cgctgagtgt
     3781 cgcgccgtgc tgctcgacca gaagctccgt aggcgccatc aaggccgctt ggaagtcgtt
     3841 ctccagtgcc agcaacatgg aaaacagcgc gaccacggtt ttcccggtcc ccacatcgcc
     3901 catcaggagc cggtgcatgc gttccggcgc cgtcatgtcg gcggtgatct cgcggatggc
     3961 gcgttgctgg tcgtcagtca gatgccaggg aaggctgtcc ttcagtttcg tcgtcagctc
     4021 gcgcttgatc tggaacgcga cgccgctgcg ctgccgcttg gccaggaccc gggcccgaat
     4081 gagcatgagc tggagatcca ggagctcgtc gaaagccagc cggcgtcggc ctcgctctgc
     4141 ctggtccact gacgcgggcc ggtgcaccgc gatgagggcg tcgcgaagcg gcaacaggtc
     4201 gagggcgcgt cgctgctgct ccggaagggg atcatcggtc agcgcgatca atccgtcgag
     4261 atgtcgctcg atgagggaac ggatgacctt gtgactgagt ccctcggtcg cggggtagac
     4321 cgggagcacc ttgcccgccc ccaccggatc ggcatcccct tcggcatcgg cgagaatgat
     4381 gtactcccga ggagccagct gccggccgtg gtagaaacgt acggggccgg acaccaggag
     4441 cgtttggccc acggcaatgg tccggtccag aaacggctgc cccggccaga cgcattccag
     4501 cagaccgctc tcatcccgca gcaccgcgtg aaaaattcgg agaccccggc gcgtcgggag
     4561 caccccttta gccacgactc gtcccacgca ggcaacctcc tgtccgagct ccgcccgggc
     4621 gagcggggtg agcgcggaag catcgatgta tcggtggggc agatgccaga gaagatcacg
     4681 cgcggtgcga acacctaggc gggcgagcgc ttcggctcgg cgctcgccta ttcccttgag
     4741 gaactggacc ggggtgtcta gacgggaagg atgctgagtg gaagaggtag gcaccgtgat
     4801 tacgatgcct cgaccggagc ctcggcgaga agattctcag caaagcgctc ggcatcgaac
     4861 ggtgtcaggt cctccacgga ttcgcccaaa cctacgaatc gtatcggcag gtccaactct
     4921 ttccgtaatg ccgcaacggc accaccccgg gcgctcccgt ccagcttggt caccacgatt
     4981 ccggtcggca ccactgcctg agagaacagc ttgccttgct gaacggcatt ctgaccgact
     5041 gtgccatcca gaatgagaaa aacctcatgt ggtgcaccgg gaagacgccg tccgatgacc
     5101 cgagtgatct tgcgcaactc gtccatcagc ccttcctgcg tatgcagccg gcccgcggta
     5161 tcgacgatta cggtgtcgag ttcgcgagag acagcagcat ccaccgcatc gaaggccact
     5221 gccgcaggat cgccgccggg cgctcccgag acacaaggga cgttgagccg attggcccag
     5281 acctggagct gggcgattgc acccgcccgg taggtgtcgg cggcggcgag caataccttg
     5341 cgtttctcct gctgcagccg ccaggcgagt ttcgcggccg ttgtcgtctt tcccgtgccg
     5401 ttcaccccga tgaggagaat caccgtgggt cctgaatcgg cgcgggcgac ggcgccctcc
     5461 gtcccggtgc tgtccaacag ccgcaccaaa cgctgctgga gcgatcgctt gagatcggcc
     5521 tcggttttga tcttgcctcg gcggacctcg tcctccagcg cttgggtcag ctcaacggtg
     5581 gccgacacac caaaatccgc ctcgatcagc actcgttcca gattctcgat atcgtccgca
     5641 ttgagcccgc gcatcagcgc gccaacgtcg gtcagcgcga ttcgcttgat gcgggcccat
     5701 acactcgtct tttcagagct gccaagtctg ttggatttca cgttctctgt tccatgac
//
LOCUS       DASRPQ010000990         1012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3565601, whole genome shotgun sequence.
ACCESSION   DASRPQ010000990 DASRPQ010000000
VERSION     DASRPQ010000990.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3565601"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..465)
                     /locus_tag="VFD73_11245"
     CDS             complement(<1..465)
                     /locus_tag="VFD73_11245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZI74569.1"
                     /translation="MAQTSAFHSPSATPDFDQTLVMAIELSSTKWVLAAQVPGLPRLK
                     AKRTIEPTAEALLAAIESYRERAKRAGHTVQRVIATYEVSWSGFWLARWLARQDVETH
                     VLQPSSVPVDRRARRAKSDGIDAEVLLRTLLAWLRGEPRVCSMVPVPSEADED"
BASE COUNT          180 a          326 c          304 g          202 t
ORIGIN      
        1 gtcctcgtcg gcctcagagg ggacgggaac catcgagcag acgcgcggtt cgccgcgtaa
       61 ccaggccagc agtgtgcgca gcagcacctc ggcatcgatc ccgtctgact tcgctcggcg
      121 tgcgcgacgg tcaaccggaa cactcgaagg ctgcagaacg tgcgtctcta catcctgccg
      181 agccaaccaa cgggctagcc agaagcctga ccagctgact tcataggttg caatgacccg
      241 ctggacagtg tgacccgcgc gcttggctcg ctcgcgatag ctctcgatcg cagccagcag
      301 tgcctcagcc gttggctcaa tggtccgctt cgctttgagg cgcggcaggc cgggcacctg
      361 cgctgccagc acccacttcg tactgctcag ctcaattgcc atcacgagcg tttggtcgaa
      421 atcaggtgtg gcagatggag aatggaaggc ggacgtctgc gccatgattg ggatctccgg
      481 gctttgctcc acgcggacac actatgttgc cgcctgctga ccctcatggc atctgttggc
      541 gcggtgcatg accgctggcc cagatgggtt ccgcgatcca gtcccatatg tggacggtcc
      601 cctccttgca aggtgttttg cagtgttttg atcagatcgc ttgcgtccat atgtccggcc
      661 tcacatgagg gcattctcgt caagctattt cgtcatgcgc agctccgctc gggtcgaagg
      721 ttatcgtggt aaggcgtcat ccaaggcgga gctctcgtca gcgcaggatc tccctgcgaa
      781 cctcacatcc ggcgggacac tgtccccacc acggtcccgc attcgggacg ggagagctcc
      841 aggagagcgg caccactcta taagacggca cgcgcgtgcc aggccggaca acggcgacgc
      901 tcccttggat ccgtaggccc gagctgcccc gcagcccagg cctcacatga gggcattctc
      961 gtcaagctat ttcgtcatgc gcagctccgc tcgggtcgaa ggttatcgtg gt
//
LOCUS       DASRPQ010000991         1559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2937581, whole genome shotgun sequence.
ACCESSION   DASRPQ010000991 DASRPQ010000000
VERSION     DASRPQ010000991.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1559
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2937581"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            192..962
                     /locus_tag="VFD73_11250"
     CDS             192..962
                     /locus_tag="VFD73_11250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HZI74570.1"
                     /translation="MNFTLRIWRQPAPNAPGRMVQYEAGDISPDMSFLEMLDVVNERL
                     MEQGEVPIAFDHDCREGICGSCSLMINGIPHGPMPGTATCQLHMRSFRDGATITVEPW
                     RVRAFPVLKDLVVDRSALDRIIQAGGYITAPTGGAPDGNAILIPKATVDTAMDAAQCI
                     ACGACAAACPNGSASLFTAAKLAHLGLLPQGQPERYRRTARMVAQMDIEHFGGCTLYG
                     ECQDACPKLISIDTITRMNRDFLRASFSAGRGAVAEPD"
     gene            1043..>1559
                     /locus_tag="VFD73_11255"
     CDS             1043..>1559
                     /locus_tag="VFD73_11255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74571.1"
                     /translation="MGATAVPANFWADPVPHGGSLDEIRVVQPALMVHAGALANRLRF
                     IGTVNLEGQTIPNGELAPGDWGEGFVDRRHPHTYVHEAVLSYQQQLVFGAEPVELSLS
                     AGKGFAPFGTDDPMSRPALRYPVNHHLAQILERAVAILGVRAGPVLLEGGLFNGDEPE
                     RPSQWPKISRFG"
BASE COUNT          268 a          516 c          494 g          281 t
ORIGIN      
        1 tgcacctggc gcagaggagc tataagtgag tggagagtgg aaagtcacga gtcgcgagtc
       61 gcgagtcgcg ttagagtcat gagtcacggg tcgcgagtca cgcgttccca ccgatatgga
      121 tcgcctgcat ttgggcgtgc gcgactcgtg actcgcgacc cgcgactcgc gaccctccgc
      181 tccaggcaaa catgaacttt acccttcgaa tctggcgcca acccgcaccc aacgcccccg
      241 gccgaatggt ccaatacgag gctggtgaca tcagtcccga catgtccttc ctcgaaatgc
      301 tggatgtggt caacgagcgg ctgatggagc aaggcgaggt gccgatcgcc ttcgaccatg
      361 actgtcggga ggggatctgc gggtcttgca gcctcatgat caatgggatt ccgcacggcc
      421 cgatgcccgg caccgccacc tgccagctcc atatgcgaag ctttcgggac ggcgccacca
      481 tcaccgtgga gccgtggcga gtccgcgcct ttcccgttct caaggatctg gtggtcgacc
      541 gcagtgcgct cgatcgaatc attcaggcgg gaggctatat caccgctccc accggtgggg
      601 caccggacgg caatgccatt ctcatcccca aggctacagt ggacaccgca atggatgcgg
      661 cccagtgcat cgcctgcggc gcctgtgccg cggcctgccc caacgggtcg gcctcgttgt
      721 tcaccgcggc aaaactggcg catctggggc tcttgcctca gggtcagccg gagcggtatc
      781 gccggaccgc tcgcatggtg gcccagatgg acatcgagca tttcggtggg tgcaccttgt
      841 acggcgagtg ccaggatgcc tgccccaagc tcatcagcat cgacacgatc acccgcatga
      901 accgcgactt tctgcgagcc agctttagcg ccggccgagg cgccgtggcc gagcccgact
      961 gattcacacc ctcaaagttc ttgtcctggc ggccctctgc cttcctgcga ttgcgctggc
     1021 tcagggctcg ccgacgctcg aggtgggcgc caccgccgtg cccgcgaact tctgggccga
     1081 cccggtgccc cacggcggtt cgctggatga gatccgtgtg gttcagccgg ccctcatggt
     1141 gcatgccggt gcgctggcaa accggctccg ttttatcgga acggtgaatc tcgagggtca
     1201 gacgatcccg aatggagagc ttgcgcccgg agactggggc gagggattcg tggatcggcg
     1261 ccatccccac acctacgtcc acgaggcggt cctctcgtat caacagcagc tggtcttcgg
     1321 tgctgagcca gtggaactct cactctcggc ggggaagggg ttcgcaccct tcggcaccga
     1381 cgaccccatg agccggccgg cccttcgcta ccccgtgaac caccatctgg cccagatcct
     1441 ggaacgagca gtggcgattc tgggagtgcg ggccggtccc gtgctgctgg agggcgggct
     1501 cttcaacgga gacgagcccg aacgcccgag ccagtggccc aagatcagcc ggttcggcg
//
LOCUS       DASRPQ010000992         2505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3881913, whole genome shotgun sequence.
ACCESSION   DASRPQ010000992 DASRPQ010000000
VERSION     DASRPQ010000992.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2505
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3881913"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..588)
                     /gene="thyX"
                     /locus_tag="VFD73_11260"
     CDS             complement(<1..588)
                     /gene="thyX"
                     /locus_tag="VFD73_11260"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: protein motif:HMM:TIGR02170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050797 - thymidylate synthase (FAD)
                     activity [Evidence IEA];
                     GO_process: GO:0009265 - 2'-deoxyribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HZI74572.1"
                     /translation="MTLDSRLVTLPSIEILRSPRVTLIARPQFIEPPHLPVQWRGQSS
                     DGERIAEFAGRLCYMSQNNPAGRSTAEYLRNILKQGHGSVFEHSTYVMLIEGISRSCS
                     HELVRHRAGWGYSQLSQRYVDESHAAFVMPPAIQGDATMEAEWTRQVAAAQQAYVEAV
                     ERLMERYAWVEDKVHRRKMAREAARSVLPNATEVKI"
     gene            complement(683..2326)
                     /locus_tag="VFD73_11265"
     CDS             complement(683..2326)
                     /locus_tag="VFD73_11265"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HZI74573.1"
                     /translation="MLPPPDIRGVYRSDARARACYAEGAGIYRIIPSAVAVPADVADL
                     RQLVCWAAEHRAALIPRGAGSAMGGGNVGDGVIVDLTRLKERVLSIVPDSRRATAAAA
                     VTLAELNAAAQSHGLRLPPDPSSGRWATLGGMVATNAAGARSVRYGSVRRWVEALTLL
                     TADGETIMLRRGAKSTRASSSALDRFTRNALPAIQESASLIRSRFPKTRKNSSGYALD
                     AYLASGDVLDLIIGAEGTLGIVTEIEWRLDPIPRYRAGLRIALGSLDQLSALIEAMSS
                     VEPSALELLDRSFLELLNDETLAAAGISLNEAEAVLLMELERDDADALRDAVESAATR
                     AKLLAYSVDSAFSASAALRLWELRHAASPILAGLPVERRSLQVIEDACVPIAAVSEYI
                     KEVRRASERRGLPVVIFGHAGDGHIHVNLLPDVTRLGWERQVVSLLEEVTAIVVRLRG
                     TPSGEHGDGRLRAAALAQVYGPEILRLFRLVKDSFDPLGIFNTGIILPSGEPAISRLK
                     VGCAAAPVPEDIGRALREIERSGGYAQSRLELAGESRES"
BASE COUNT          454 a          812 c          789 g          450 t
ORIGIN      
        1 gatcttcacc tcggtggcat tgggcaggac gctccgggct gcctctcgcg ccatcttgcg
       61 ccggtggacc ttgtcctcga cccaggcata ccgctccatc agccgctcga ccgcttccac
      121 ataggcctgc tgtgccgccg cgacctgccg ggtccattcg gcttccatcg tggcgtcgcc
      181 ctgtatggcc ggaggcatca cgaatgccgc atgcgactcg tcgacatacc gctgtgacag
      241 ctgagagtat ccccagcccg cccggtgccg caccagttcg tggctgcagg agcgggagat
      301 cccctcgatg agcatgacgt aggtcgagtg ctcgaacacc gagccgtggc cctgcttgag
      361 aatgtttcgg aggtactcgg cggtgctccg gccggctggg ttgttctggc tcatatagca
      421 caagcggccg gcgaactcgg cgatccgctc gccatcgctg gattgacctc tccactgaac
      481 cgggagatgg gggggctcga tgaactgagg acgggcgatc agagtgaccc gaggggagcg
      541 gaggatttcg atcgaaggga gagtcacgag tcgcgagtcg agagtcacgg gttctattca
      601 gattgaggtg atccaggccg agctcgaaaa tgtatagcta tctcggataa agcgaaggat
      661 ttcgcgactc gtgactcgcg actcacgact cacgactctc gcctgccagc tccagtctcg
      721 actgggcata ccctccgctc cgctcgatct ctcgaagcgc tcgcccgata tcctccggca
      781 ccggggccgc cgcgcatcct accttgaggc ggctgattgc cggctctcct gaggggagga
      841 tgatcccggt gttgaaaatc ccgagcggat cgaagctgtc cttgaccaaa cgaaagagcc
      901 gcaggatctc ggggccgtag acctgagcca gtgccgcggc acgcagccgg ccatcgccgt
      961 gctcgcccga cggagtgcct ctcagtcgca cgacgattgc ggtcacctcc tccaaaaggc
     1021 tcactacctg tctttcccag ccgagccgag tcacgtcggg cagaaggttc acgtgaatgt
     1081 ggccatcgcc tgcgtggccg aagatcacaa cggggaggcc tcgcctttcc gaagcgcggc
     1141 gaacttcctt gatatactcg ctcaccgcgg caatggggac gcacgcgtcc tcgatcacct
     1201 gcagggagcg tctctccacc ggcagtccag ccaggatcgg actggccgcg tgtcgcagct
     1261 cccagagccg gagggccgcg gacgcggaga acgccgaatc cacggagtag gccaacagtt
     1321 tcgcccgagt ggctgcgctc tccaccgcat cacggagagc gtcggcatcg tcccgctcga
     1381 gctccatcag gagcaccgcc tccgcttcgt tcaggctgat gccggcagcc gccagcgtct
     1441 catcattcag caattcgagg aagcttcggt ccagcagttc cagcgccgac ggctcgacgg
     1501 agctcatcgc ctcgatcagt gccgaaagct gatccagtga gcccagcgct attcgcaggc
     1561 cggcacggta ccggggaatc ggatccagtc gccattcgat ctcggtcaca atgcccaggg
     1621 tgccctcggc tccgatgatc agatcgagca cgtctcctga ggccaggtac gcatcgaggg
     1681 cgtatccgga cgagttcttc cgggtcttgg gaaaacggct acggatgagc gaggccgatt
     1741 cctgaatggc agggagcgcg ttgcgagtga atcggtcgag cgccgacgat gaggcccggg
     1801 tggatttagc tccccggcgg agcatgatgg tttcgccgtc agcggtgagc agggtgagcg
     1861 cctcgaccca tcggcgtaca ctgccgtagc ggaccgagcg tgctcctgcc gcattggtgg
     1921 caaccatgcc tcccaacgtt gcccagcgcc cgctcgatgg gtccggcggc aggcgaaggc
     1981 cgtgggattg ggcggcggca ttgagctctg cgagtgtaac ggcggcagcg gcggtggcgc
     2041 ggcgggaatc gggaactatg gaaagaacgc gctctttgag acgggtcaga tccacgatca
     2101 ccccgtcgcc cacgttaccg cctcccatgg cactgccggc tccgcgtggg atcaaggcgg
     2161 cccggtgctc cgcggcccaa cacaccagct gtctcaagtc agcgacgtcg gcagggactg
     2221 ccactgcgct ggggatgatt cgatagatgc cggccccttc cgcatagcag gcccgcgccc
     2281 gggcgtcgga ccggtaaacg ccccgaatgt cgggaggagg cagcattcgc caaagctaac
     2341 tatcttctgg cctatggctg atgtacccag agcacaactg atccacatcg acgtcgatcg
     2401 tcgtctgggt catgagtggg acgagtggga tggacagcca cttcccaatc agggcaacta
     2461 cgactctcca cccattctct tctttgcctg gtccgcccta accct
//
LOCUS       DASRPQ010000993         1375 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4517430, whole genome shotgun sequence.
ACCESSION   DASRPQ010000993 DASRPQ010000000
VERSION     DASRPQ010000993.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1375
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4517430"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..385
                     /locus_tag="VFD73_11270"
     CDS             <1..385
                     /locus_tag="VFD73_11270"
                     /inference="COORDINATES: protein motif:HMM:NF014973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nitrile hydratase subunit alpha"
                     /protein_id="HZI74574.1"
                     /translation="AELGFGGRQGEHMVVVENTDKVHNIIVCTLCSCYPWPVLGLPPV
                     WYKSAPYRSRAVLDPRSVLADFGLRLADDKEIKVWDSTAEMRYLVLPQRPAGTDGWSE
                     ERLASLVTRDSMIGTGVPKQPAEVS"
     gene            1003..1212
                     /locus_tag="VFD73_11275"
     CDS             1003..1212
                     /locus_tag="VFD73_11275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74575.1"
                     /translation="MLEWPRNERLANTLSFLAGLTVAVSVLLCIAVPIITGASLLEIA
                     IIIAVYLVTVGFICWLLTRGRSSTY"
BASE COUNT          258 a          440 c          404 g          273 t
ORIGIN      
        1 cgccgaactc ggcttcggtg gtcgccaggg cgagcacatg gttgtcgtcg agaacaccga
       61 taaggtgcac aatattatcg tctgtacgct gtgctcctgc tatccctggc cggtgctggg
      121 attgccgccg gtctggtaca agtcggcccc gtatcgttcg cgtgccgtgc tcgatccgcg
      181 ctccgtgctc gctgatttcg gcctgaggct cgccgatgac aaagaaatca aggtttggga
      241 ctccaccgcc gagatgcgtt atctcgtcct gccccaacgt cccgctggga ccgacggctg
      301 gagcgaagaa cggctggcca gcctcgtcac ccgcgacagc atgatcggca cgggagtgcc
      361 caagcagccg gcagaggttt catgaacggc gtagcgtttt gatctgctga tatttaaaaa
      421 aaccccgatc aacacggcgt ttgtgcagga tttccgttgc gttaaaaccg actgagggcc
      481 cccccacgga actgcgccgc gtgaggccca gccattttgc cctaacaggt ccggcccggg
      541 tcgcgcagca gcctgctgga acagccgtga gttgagaatt cgccaagtga agaaaaccat
      601 taccggggtg atgcaaaccg ttaccgggtt gaagagcccg ctcaaccccg cgtcctgatg
      661 tcgggggagt tgccgcgggt tgccaatggg cctcccgaat gaccccttcg atcctaccct
      721 gcccagaggt cgcgagcccc cgccggcggc ggctcaaccg ctggccctta tccgcatccg
      781 caaacgttct gcgaatttcg gggccgggca cgcccttcgc aacagtcgac acccccccgg
      841 cggggccgca ggcacatgac ccggacccaa attcccaacg cccgcgtgaa gtccctttga
      901 tccgtcctac cttcggtacg gaatggtacc cagacaatcg tggccttccc tgctcactcg
      961 caataccgtt ccagttcaat ccgcagctta aggataaata acatgctgga gtggccgcgg
     1021 aacgagcgcc tcgccaatac gctcagtttc ctggcgggac tgacggtcgc agtctcggtg
     1081 ctgctctgca tcgcggtgcc gatcatcact ggggcgtcat tgctggagat cgcgatcatt
     1141 attgccgtct acctggtgac cgtggggttc atctgttggc tgttgacgcg cgggcgctca
     1201 tccacttact gacccggtca ataaacagcg ctaagccggc gctaagccgg cgggagcgcg
     1261 cgtatctgcg gctctttgcg gcctttgaag ctcaaacgcg ggccaggcac acagcagcag
     1321 ccagccgatg tcgatcgatg ccgtcattac cacaggtgtt taagcgtcgg gcgat
//
LOCUS       DASRPQ010000994         1022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2937743, whole genome shotgun sequence.
ACCESSION   DASRPQ010000994 DASRPQ010000000
VERSION     DASRPQ010000994.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2937743"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..194)
                     /locus_tag="VFD73_11280"
     CDS             complement(<1..194)
                     /locus_tag="VFD73_11280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74576.1"
                     /translation="MAPVLALDPLRNAVLGLAGAVALLAGFIVIQRSLTFVGRSRARQ
                     REPRLTRLVYEAIQSSPPTG"
     gene            429..>1022
                     /locus_tag="VFD73_11285"
     CDS             429..>1022
                     /locus_tag="VFD73_11285"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI74577.1"
                     /translation="MLSLSRVAIAQEREGDEAWSQGRYEEARTAYQRVLAGDSNHVRA
                     NLRTGVILSWQGKLDSSLVYLARARKAEPSDVEIRLIQARVLSWDKQYAAALARYDSL
                     LLDHPGLHDAVIGRAQTLAWAGRLDDSRALYRQILSSDSTDRDALLGAAQVGAWKGQL
                     TTAEQEYRELLAHNPRDVEARIGLGYVYFWQGRTGAAA"
BASE COUNT          202 a          309 c          337 g          174 t
ORIGIN      
        1 tcgccggtag ggggtgagct ctggatggct tcgtacacca gacgcgtgag tctcggctca
       61 cgctgccgcg cccgagacct gccgacgaag gtgaggctcc tctgaatcac gataaacccg
      121 gcgagcagcg cgactgcgcc agccaggccc agcacagcgt ttcgaagcgg gtccagtgcg
      181 aggacaggcg ccatcccgga gggatctcca tgcatttcat tcgttgagcg gtgccggggg
      241 gcggcaggct ccaaacttgc aaggcaactt ccgttccccg catgagcctc atcactcata
      301 caggcaactc gttgaccaac agcgaattgg attggcaaaa acaatcggcg cgcgagcgac
      361 cgagcagcgg tccgtgcaaa acgcgccgag acagctggac ccgcttcatc agcgtttcag
      421 ctgtccttat gctcagcctg tcccgggtag ctatcgccca ggagcgggag ggtgatgaag
      481 catggagtca gggtcgatat gaggaggctc ggacggcgta ccagagagtg ttggccgggg
      541 actccaacca tgtgcgcgca aatcttagga ctggggtgat actctcctgg caagggaagc
      601 tcgattcatc cctggtctac ttggcgcgag cccgcaaggc ggagccatcc gacgtagaga
      661 tccgactcat ccaggcccgc gtgctgagct gggacaagca atacgctgcg gcactcgccc
      721 ggtacgacag cctcctgctc gaccatccgg ggttgcacga cgcggtcatc ggccgagccc
      781 agacattagc atgggccggg cggctggatg attcgcgtgc gctgtatcga cagatactgt
      841 cgagtgactc aaccgatcgc gacgccctgc tcggggccgc gcaggttgga gcgtggaagg
      901 ggcagctcac gaccgccgag caggagtatc gcgagctgtt ggcccacaat ccgcgcgacg
      961 tggaggccag gatcggtctt ggctatgtct atttctggca gggccgaacg ggagccgcag
     1021 cc
//
LOCUS       DASRPQ010000995         1175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3566024, whole genome shotgun sequence.
ACCESSION   DASRPQ010000995 DASRPQ010000000
VERSION     DASRPQ010000995.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3566024"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..212)
                     /locus_tag="VFD73_11290"
     CDS             complement(<1..212)
                     /locus_tag="VFD73_11290"
                     /inference="COORDINATES: protein motif:HMM:NF019656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1707 domain-containing protein"
                     /protein_id="HZI74578.1"
                     /translation="MPNDLPGLRASHADRDRVVDALRVAAGDGRLSAEELDTRLESAL
                     SARTLGELAELTADLPIAPAAKDVLVV"
     gene            501..788
                     /locus_tag="VFD73_11295"
     CDS             501..788
                     /locus_tag="VFD73_11295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74579.1"
                     /translation="MNAQKDNTFAERLRRWWLTPPRPGLQRLIYPWEYRHLRGFAAIR
                     IAGSCIAAFAGVVCLSYGVYGWAAFFLVVAALAFAAGYWYLTIARSRSART"
BASE COUNT          198 a          386 c          385 g          206 t
ORIGIN      
        1 accacgagta cgtccttggc tgcgggcgcg atcggcaggt cggcggtgag ctcggccaac
       61 tcgccgagcg tccgggctga aagcgcactc tccaatcggg tgtcgagctc ctcggcgctg
      121 agtcggccgt caccggcggc aacccgcagc gcatccacga cgcggtcgcg atcagcgtgc
      181 gatgcccgca ggccgggcag gtcattcggc atggcagcca cgttagcaag gcaggcggga
      241 ctgcccccgg cgtgccgcgg tcgagtctgc tgagctgcgc cgccacaaca agctgctgga
      301 gtaggagaac gagatgctgc ggccgcgccg ggccgatgcg ccccgcgagt ggccacccgc
      361 cgccagccgg tccggaacca gcccgccacc gcacagcgac gaccagcccc accacccttg
      421 acatatcacc tatcaaagtg atatcacttt gataggtgac cggagtggcc ggacacccca
      481 aggccacagg agacatcccg atgaacgcac agaaagacaa cacctttgcg gaacgtctgc
      541 ggcgctggtg gctaactccc ccgcgacccg gcctgcaacg cctgatctac ccgtgggagt
      601 accgtcacct ccgcggattt gcagccatac gtattgccgg tagctgtatc gcggcctttg
      661 cgggcgtcgt ttgcctctcg tacggcgtct acggatgggc agccttcttc ctggttgttg
      721 cggcgctggc gttcgcggct ggttactggt acctcaccat cgcccgctcc agatctgccc
      781 gaacctgagc ctgtgctgca ggcacacgcc agcgctggca gcagatccgt taacaacaag
      841 gccccttcca tgatcggaag gggcctctga cgtggggcag tgtacgtacg cgaagcccgg
      901 attgctgctc gcctccgtct tcggcgacag gcgccgatcc ctggcaagcg gacgttgggt
      961 ctagacatcc cagaggcttg ggctgtcaag cggcaacggg gattgcttgt ctggggtggg
     1021 ccgggcggtg gtctcgttgt agacggtgcg ggttttcagg gtgccgctga caccgtgcag
     1081 gagccgacag caactctgct accgggcagg cgctccttcc cgagcccggc tcggcacagc
     1141 taggtgggta ttgggttctt gaaggtgtag atcgt
//
LOCUS       DASRPQ010000996         1445 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2311386, whole genome shotgun sequence.
ACCESSION   DASRPQ010000996 DASRPQ010000000
VERSION     DASRPQ010000996.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2311386"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1121)
                     /locus_tag="VFD73_11300"
     CDS             complement(<1..1121)
                     /locus_tag="VFD73_11300"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI74580.1"
                     /translation="MFLDLQGKLLGRYSIERELGRGGTGIVYLAREVRLDRLVALKLL
                     RPDQGSDGRSRFLLEARTAARLSHPNIVPILTVEECEPFVFFTMPYIAGGTVGESVRN
                     RGPFLLIDAVRILRDTAWALEYSHGHGIIHRDIKPDNILIERETQRTLVADFGIAGST
                     GTRGAGAPVTGTPAFMSPEQIRGADGDARSDLYSLAAVAYYMLSGQTPFSETTVEAQL
                     LAHLNQQPRSLGEIVTHIPQALVDLIMGGLSKDMDQRPSSAAALAEDLSAWLGEQHRP
                     VPAGVARFLRQLRDSRPVALLYSTVCGLLLVIQLVLALKEPWRLEVVLEYGLLFALPP
                     LLILLARVRGLIAQGHTRADLVQALHAAADREEQEARQAP"
BASE COUNT          278 a          433 c          462 g          272 t
ORIGIN      
        1 ggcgcttggc gggcctcctg ttcctcccga tcggctgcgg catgcagcgc ctggaccaga
       61 tcggcccggg tatgaccctg tgcgatcaga cctcggaccc gggctagcag gatgaggaga
      121 ggcggcagtg cgaagagcag cccgtactcg agaacgacct cgagtcgcca aggctctttc
      181 agcgctaaca ccagttgaat caccaggagg agaccacaga ctgtcgaata caagagggct
      241 actggccgtg agtcccgcag ctgtctcagg aaccgcgcga ctcctgccgg caccgggcgg
      301 tgctgctcac ccaaccaggc agagaggtcc tcggccagag ctgctgcact ggatggccgc
      361 tggtccatgt ccttgctcag gccacccatg atcaagtcga ccagcgcctg aggaatgtgg
      421 gtgacgatct ccccgagaga tctcggctgc tggttgagat gagctagaag ctgagcttcg
      481 accgtcgtct ccgagaacgg ggtctgtccc gacagcatgt agtaggcgac ggcggccaag
      541 gagtagagat cgctcctggc atcgccatcg gcacctcgga tctgctctgg gctcatgaat
      601 gccggtgtgc ccgtgaccgg agcgccggct ccgcgtgtgc ccgtgcttcc agctattccg
      661 aaatctgcga ccagggtcct ttgcgtctcc cgttcgatca ggatgttgtc tggcttgatg
      721 tcccgatgga tgatgccgtg cccatggctg tattccaggg cccaggctgt atcccgaagg
      781 attcggacgg cgtcaattag aaggaaggga cctcggttac ggacgctttc gccgacagtt
      841 ccgcccgcga tgtagggcat ggtgaagaag acgaagggct cgcactcctc gacggtgaga
      901 atcggaacga tgttgggatg ggagagtcgg gcagcggtcc gggcctcgag cagaaatcgt
      961 gaccggccgt ctgacccctg atcgggacgt agcagcttca acgctaccag tcgatcaagc
     1021 cgaacctccc gggccaggta cacgatgcct gtccctcccc ggcccaactc gcgttctatc
     1081 gagtagcggc cgagaagctt gccttgaagg tcgagaaaca atgaatcaat ctctgggggc
     1141 aggcgcagcc tcgtatggat gtgtcaggcc ctagcgactg gcagagtgca agcctgaatt
     1201 cgcgattttc ccgggggata catcacggtc ggtactgaga gacttcccag ctggtcgctc
     1261 ggcagaaacc gtgccgaggc gcgaggtggc ctcgaacacc gcaggcaacg cgcggccgcg
     1321 ctagttttag tgacggtatt agagctgcgc acctctagac tggcggcccg atgagttatc
     1381 gctacttcat ctgcgacgtg ttcaccgaca cccgattcgg cgggaaccag ttggctgtgc
     1441 tgccc
//
LOCUS       DASRPQ010000997         1035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1687032, whole genome shotgun sequence.
ACCESSION   DASRPQ010000997 DASRPQ010000000
VERSION     DASRPQ010000997.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1687032"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..213)
                     /locus_tag="VFD73_11305"
     CDS             complement(<1..213)
                     /locus_tag="VFD73_11305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003876199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI74581.1"
                     /translation="MRLFVGDDWAEDHHDVELMNEQGRVLARRRLPEGVAGMARLHEL
                     IGEQLGEGADDAEVIIGTETDRGPWVA"
     gene            complement(667..>1035)
                     /locus_tag="VFD73_11310"
     CDS             complement(667..>1035)
                     /locus_tag="VFD73_11310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74582.1"
                     /translation="TGLSCAGTVDEPTNRKQMEDLVRSVTTGIILVTRDLPWCEHGRP
                     EDGFGYWCSLRPDVVMCAFCFGAAQAMAAAEDFRCSVCGGPAPDKDSDASVMAKPEPW
                     LGVYFFLCAQCCPSDSWGPG"
BASE COUNT          197 a          377 c          285 g          176 t
ORIGIN      
        1 ggccacccac gggccgcggt cggtctcggt cccgatgatc acctccgcat catcggcgcc
       61 ctcgcccagc tgctccccga tcagctcgtg cagccgggcc atcccggcta ccccttccgg
      121 cagccgccga cgggccagca cccggccctg ctcgttcatc agctccacgt cgtgatggtc
      181 ttcagcccag tcatcgccga cgaacaagcg catcaattct cccgcctgaa atgcccgatc
      241 cggtcagcag cccgcgggag aacaatcagc gccctaatga aacagtgctc acgccagcag
      301 gcgggcacga catcccagca gcgatcaact ctcccggtcg ccggcagggg cacggtcttt
      361 tcacagggct ccaagcccgg cggacaacag tgctcacctg ccggcggcca ccagctaacg
      421 agtctgccgg acggcgaacc cgctaacact cattagcgga aggtcggcgg ttcgaccccg
      481 cccctgaccg ccagtcaact agcagcctgt gggcctgtga ccaggctgaa cgtctcccat
      541 cactggacct gctcaacatc ccttgtgacc gtgactgccc gttcacgacc atcgtttgct
      601 gtcctttagg gcacgcggag ggcacgactg catgatcctc tcggtgcgat tagcgctcat
      661 acctggtcac ccaggtcccc agctgtctga agggcagcat tgcgcgcaca ggaagaagta
      721 gacccccagc cagggttctg gcttagccat gactgaggcg tcgctatcct tgtccggcgc
      781 cggtcccccg cacacgctgc aacggaaatc ctctgccgcg gccatggcct gagcagcgcc
      841 gaagcagaag gcacacatga ctacgtccgg ccgaagtgaa caccagtagc cgaacccgtc
      901 ttcaggacgc ccatgctcac accacggaag gtctcgtgtg acgaggatga tgcccgtggt
      961 cacggagcgg acaagatctt ccatctgctt gcggttcgtc ggctcgtcca ctgttccagc
     1021 acaactcagt ccagt
//
LOCUS       DASRPQ010000998         1303 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2638541, whole genome shotgun sequence.
ACCESSION   DASRPQ010000998 DASRPQ010000000
VERSION     DASRPQ010000998.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2638541"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..736
                     /locus_tag="VFD73_11315"
     CDS             <1..736
                     /locus_tag="VFD73_11315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74583.1"
                     /translation="RDIVIVGGGCYGSFYAGQLERAREQGRAEYRQLLIVDRNSACEI
                     ASRLGTGPFRRLVVEEWSAFFDRFLGTAPAPGPGEPGDAIVPSPLMPHLMSQWLFRRA
                     QLRWPGRPIEICAPPIGPGTPYDVSAPDGTRYISYADWLCPTHCIEPALCPVIRAPRT
                     WDIADALQRLSLRIPTTDPTAGPVLFQCLHRVFGVGMFDVASVLDGENVMVKAGLQGS
                     PVDILVGTISHCHGAVSLLRLGAANS"
     gene            804..>1303
                     /locus_tag="VFD73_11320"
     CDS             804..>1303
                     /locus_tag="VFD73_11320"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZI74584.1"
                     /translation="MARSEFDVIIVGGGPAGLCAAMYAGRGLLHSVLIERGVPGGELL
                     NTEWIDDYPGFEHVLGRQLADLMTAHAVKFGADIRQDTVESIVRGEDEIFEVTTGLGQ
                     VYRAPAVILTAGGTPNKLEVPGELEYAGRGVSYCAVCDGAFFKGETLAVIGGGDAAVE
                     EADYLTR"
BASE COUNT          204 a          405 c          435 g          259 t
ORIGIN      
        1 ccgcgacatc gtcattgtcg gcggtggatg ctacggcagc ttctacgccg ggcagctgga
       61 gcgggccaga gagcagggcc gcgccgagta tcgccagctc ctcatcgtcg atcgcaactc
      121 tgcgtgtgag attgccagcc ggctgggcac cgggccattc cgccgtctgg tggtggagga
      181 atggtcggcg ttcttcgatc ggtttttggg aaccgcccct gcgcccggtc caggcgagcc
      241 gggcgatgcc atcgtgccgt cgcctctcat gccgcacctc atgtcacaat ggctgtttcg
      301 acgggcgcaa ctacgctggc ccggccgccc gatcgagatt tgtgcgccac ccataggacc
      361 cggcactccc tacgatgtct ccgcccccga cggcactcgt tacatctcct acgctgactg
      421 gctctgcccg acccactgca tcgagcccgc gttgtgtcct gtgatccggg ctccgcggac
      481 ctgggacatt gccgacgcgc tgcaacggct ctcgcttcgg attccaacaa ccgatccgac
      541 cgccggcccg gtgctctttc agtgccttca ccgggtgttt ggggtcggca tgttcgatgt
      601 tgcatcggtg ctggatgggg aaaacgtgat ggttaaggcg gggttgcagg gctcccctgt
      661 agacattctg gtcgggacta tctcccattg ccatggtgcg gtgagcctgc ttcggctggg
      721 agcagctaac tcctagcttc gggaaccctt gggcgttcta tattctggag aggcgaacgc
      781 ccagaacact cacgggagaa ggcatggcgc ggagcgagtt tgatgtcatc atcgtaggcg
      841 ggggtccagc cgggctctgt gctgccatgt atgccggacg cgggctgctc cactccgtgc
      901 tgatcgagcg cggggttccc ggcggagagt tgttgaatac cgagtggatc gacgactacc
      961 ccggtttcga gcacgtgctg ggtcggcaac tggccgacct gatgacggct cacgccgtaa
     1021 agttcggtgc cgatatccgg caggacacgg tcgagtcgat cgtccgagga gaggacgaga
     1081 ttttcgaggt caccaccggt ctcgggcagg tctaccgcgc tcctgcggtc atcctgacgg
     1141 cgggaggaac tccgaacaaa ctcgaggtcc ccggcgagtt ggagtatgcc ggacggggcg
     1201 tctcctactg cgccgtgtgc gacggagcgt tcttcaaggg cgagaccctg gcggtcatcg
     1261 gcggcggcga cgctgccgtc gaggaggcgg actacctgac ccg
//
LOCUS       DASRPQ010000999         1444 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3262357, whole genome shotgun sequence.
ACCESSION   DASRPQ010000999 DASRPQ010000000
VERSION     DASRPQ010000999.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1444
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3262357"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..1267
                     /locus_tag="VFD73_11325"
     CDS             137..1267
                     /locus_tag="VFD73_11325"
                     /inference="COORDINATES: protein motif:HMM:NF014090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005384 - manganese ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030026 - intracellular manganese ion
                     homeostasis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HZI74585.1"
                     /translation="MTTPTQTAPPHEWLHHLEDEADAAYLYRELARAERDADRAKIYR
                     QLAEVEDRHVDMWRKLLADHGHSLPVPEPSRGARFRAWLARRAGTGLLLPMLLEEEGR
                     EVKGYLNLYRSSPEGTAGPTALRLAQESAEHAETLAGISGGSGEPWHKTGAGGLLRNL
                     VYGFNDGLTANFGLVAGMIGAQGNLQAAEHAVLVAGLAGMVADALSMGSSGYLAAKSE
                     REVFEHEIAMEKEEIRLMPELEREELSLLYQAKGIPAAQAEGLAAQLMQDPQRALEEK
                     VREELKIGEATSTPMREGWITGVATAFGAFIPVAPFLFNSGPGAIWTAFSLAMVSHFG
                     VGAARSFFTGRGVIRSGMDMFIVGLGVAAIGYYVGEWIVKLL"
BASE COUNT          265 a          437 c          484 g          258 t
ORIGIN      
        1 caaacgttgg cgacgacaat ttaagcaact acatctaccg gtctcgacga cattaccgcc
       61 tgaccgtctg accatctgac cgcccgaccg cccgccccct tcccgcgttc cccgctcacg
      121 ctgttatcat cctcccatga cgacgcctac ccagaccgcc cctcctcacg agtggttgca
      181 ccacctggaa gacgaggccg acgcggcgta cctctaccgg gagctggctc gggccgaacg
      241 ggatgccgac cgggcgaaga tctaccggca gctcgccgaa gtggaggacc ggcacgtcga
      301 catgtggcga aagctgttgg ctgaccacgg ccattccctg ccggtcccgg agccgtcccg
      361 gggagcgcgc tttcgggcct ggctcgcgcg gcgggcgggg acgggccttt tgcttcccat
      421 gctgctggag gaggaagggc gggaggtcaa aggatatctg aacctctatc gcagctcacc
      481 cgagggcacg gcgggaccga ccgcgcttcg gctggcgcag gagtcggcgg agcacgccga
      541 aacgctggcc ggcatcagcg gcgggtcggg tgagccatgg cacaagaccg gggccggagg
      601 tctgcttcgg aacctggtct acggcttcaa cgacgggttg accgcgaact tcggactggt
      661 cgccggaatg atcggcgcgc agggcaatct ccaggctgcc gagcacgccg tgctggtcgc
      721 cggtcttgcg ggcatggtgg ccgatgcact ctcgatgggc tcgtcgggat atctcgctgc
      781 caagagtgag cgcgaagtgt tcgagcacga gattgccatg gagaaagagg agatccgcct
      841 catgcccgag ctcgagcggg aagagctgag tctcctctac caggcaaagg gaatccccgc
      901 ggcccaggca gaaggacttg ccgcccagct gatgcaggat ccgcagcggg cgctggagga
      961 aaaggttcgc gaggagctca agatcggcga ggccaccagc acgccgatgc gcgaaggatg
     1021 gatcacggga gtggccacgg cattcggcgc gttcattccg gtggcaccgt tcctcttcaa
     1081 cagcggacca ggcgcgatct ggaccgcatt tagtctggcg atggtgtcgc acttcggcgt
     1141 cggcgcggcg cggagcttct ttaccggacg gggagtgatc cggagcggca tggatatgtt
     1201 catcgtgggt ctcggcgtcg ctgcgattgg gtactatgtc ggcgaatgga ttgtgaagct
     1261 gctctgagat tcgggaaagc tggaacacgg agagcacgga ttacacggag ggcacggaag
     1321 caaatcactt tcaccgcgtg agcttgaaac cggctggtgt gctgttgact gaaaactttc
     1381 tgaccaatcc gaaatgctgt gcgggtttct tccgtgtctt tccgtgctct ccgtgttcca
     1441 gctc
//
LOCUS       DASRPQ010001000         1297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2638654, whole genome shotgun sequence.
ACCESSION   DASRPQ010001000 DASRPQ010000000
VERSION     DASRPQ010001000.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2638654"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1214)
                     /locus_tag="VFD73_11330"
     CDS             complement(<1..1214)
                     /locus_tag="VFD73_11330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74586.1"
                     /translation="MIDRTLQGMARGGIHDHLGGGFHRYSVDAKWIVPHFEKMAYDNS
                     ELLKNYLDAYAAFGTEEYAEVARGIVRWIREVGSDPAGGYLASQDADVGLDDDGDYFT
                     WTREEAAAVLTPEELDVAAAYYDIGTAGEMHHNPGKNVLFVSATIPAIALRSGRSEEE
                     TELILNTARAKLGLARESRTAPFIDRTRYTNWNAMMASAMLRAGAVLNDEWAIGHAVL
                     TLERIRRECGSHSGVSHTPGGVEGLLDDQVQVAAAALDAYETTGIGEWLEYAERLMDH
                     VWSEYWDSENGGLFDTARSRADGAGLLPTPAKPIQDTPTPSPNGVAGIVLARLHELTG
                     QSRRREQAESLLRAFAGRAEELGLYAATYLLAVDWHLNPASHMVVVGEAHDPLAQAMH
                     RQALASFVPRRVV"
BASE COUNT          215 a          428 c          410 g          244 t
ORIGIN      
        1 accacacgac ggggaacgaa ggaggcaagc gcctgccggt gcatggcctg ggcgagtgga
       61 tcgtgcgctt cgccgaccac gaccatatgg ctagcagggt tcaggtgcca atccaccgcg
      121 agcaggtagg tcgcggcata caatcccagc tcctcggccc ggccggcgaa cgcgcggagg
      181 agcgattcgg cctgttcccg gcggcggctc tgccccgtga gctcgtgcag tcgggccagc
      241 acaatgccgg cgaccccgtt gggtgacgga gttggcgtgt cctggatcgg cttggcagga
      301 gtggggagca ggccggctcc atcggcccgg ctccgggcag tgtcgaacag ccctccattc
      361 tcgctgtccc agtattccga ccatacgtgg tccatcaaac gctcggcgta ctccagccat
      421 tctccaatgc cggtcgtctc gtatgcatcg agcgcggctg cggcgacctg tacctgatca
      481 tccaacaggc cttccacacc gcctggggtg tgggagacac cggaatggct gccgcattcg
      541 cgccggatcc gctcgagggt aagcaccgca tggccaatgg cccactcgtc gttcagcacc
      601 gctcccgctc gcaacatggc ggaggccatc atcgcgttcc agttggtgta tcgggtacgg
      661 tcgatgaacg gtgcggtccg gctttcgcga gccaacccga gcttggcgcg cgcggtattg
      721 agaatcagct ccgtctcttc ctcgcttctt ccgctccgca gcgctatcgc cggaatcgtc
      781 gccgacacga agagcacgtt cttccccgga ttgtggtgca tctcgccggc tgtgccgatg
      841 tcatagtatg cggcggcgac atcgagctcc tccggggtca gcacagccgc cgcctcttct
      901 cgagtccagg tgaagtaatc gccatcgtcg tcgagcccca cgtcggcgtc ctggctggcc
      961 aggtaccctc ccgcggggtc agagccgacc tcgcgaatcc agcgaacgat tccccgtgcc
     1021 acctcggcgt actcctcggt gccgaacgcc gcgtaggcat ccagatagtt cttcagcagc
     1081 tcagaattgt cataggccat tttctcgaaa tgcgggacga tccatttcgc gtctacgctg
     1141 tagcgatgga accctccgcc gaggtggtcg tggattccgc cccgcgccat gccctgcagg
     1201 gtgcgatcga tcatctggcg aacggcgtct gatggctggt cgtaccagcg gtggagcaga
     1261 agcgtgatgg caccggagtg gggaaacttc ggctgac
//
LOCUS       DASRPQ010001001         1333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3262672, whole genome shotgun sequence.
ACCESSION   DASRPQ010001001 DASRPQ010000000
VERSION     DASRPQ010001001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3262672"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(95..991)
                     /locus_tag="VFD73_11335"
     CDS             complement(95..991)
                     /locus_tag="VFD73_11335"
                     /inference="COORDINATES: protein motif:HMM:NF013046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase"
                     /protein_id="HZI74587.1"
                     /translation="MVVSVFTHPDCLRHDPGADHPETPARLRAILDRLKTQPGVELRE
                     AAAAPREPLRAVHPESYLSSLEAMSARGGGALFLDTILNRYSWPAVLGGVGSALAAVD
                     HALAGEGHSFAAIRPPGHHALAARGMGFCLVSNAVIAARHAQAAGRERVLIVDWDVHH
                     GNGTQALVETDPSIRYVSLHQYPWYPGTGAAAERGVGNIFNVPRGPGHPPDLYVRDLW
                     DAIVAATTQWLPEIILVSAGFDAMAGDPLGGFTLEPEHFTILTERLRERMPGVPIVGL
                     LEGGYRPSRLAEGVAAHVAALR"
     gene            complement(1006..1272)
                     /locus_tag="VFD73_11340"
     CDS             complement(1006..1272)
                     /locus_tag="VFD73_11340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74588.1"
                     /translation="MSPTVSRALTVIAAAVLAFDGAALALLGWWSRRGMLAVVGLVFF
                     ASSGLILLYWRWYRRRLADIATARRALGDEAREMRRILHDRGNP"
BASE COUNT          271 a          430 c          443 g          189 t
ORIGIN      
        1 cggagggatg gagccacgct gaacctcgga agagtgcgtt gatgagagag caggctggag
       61 tatagagccg cgacgaaggc ggcaacaggc cgaattaccg caaggcagcg acgtgcgccg
      121 cgacgccctc ggccaggcga gacggccgat acccaccctc gagcagcccg acgatcggca
      181 ccccgggcat tcgctcgcgc agccgctcgg tcaggatcgt gaaatgctcc ggctccaggg
      241 taaagcctcc cagcgggtct ccggccatgg catcgaagcc cgccgatacc aggatgatct
      301 caggtagcca ttgggtcgtt gcggcaacga tggcatccca gagatcccga acgtagagat
      361 cgggtggatg ccctggacca cggggcacgt tgaaaatgtt gcctactccc cgttcagcgg
      421 cggcgccggt accagggtac cacgggtact gatgcaacga gacgtatcgg atgctgggat
      481 ccgtctcgac caatgcctgg gtgccattgc cgtggtggac atcccaatcc acgatgagca
      541 cccgctcgcg tcccgcggcc tgggcgtgtc gcgcggcgat caccgcatta ctcaccagac
      601 agaatcccat gcctcgagcc gccagtgcgt gatgtcctgg tggccggatc gcggcaaaac
      661 tgtggccctc cccggcaagt gcgtggtcga ccgcggcgag agcactgccg acgccgccga
      721 gcactgccgg ccagctgtac cgattgagaa tagtatcgag aaaaagagct ccgccgccgc
      781 gagcactcat cgcctcgagg gaggatagat aggactccgg gtgtacagcg cggagcggct
      841 cgcgaggagc ggccgccgct tcccggagct cgacgccagg ttgggtcttc agccgatcga
      901 ggatcgcccg cagccgggcc ggggtttcgg gatgatccgc tccgggatcg tgccggagac
      961 agtctgggtg agtgaagaca gagacgacca tggcggagat cccgctcagg gatttccgcg
     1021 atcgtgcagg atccggcgca tctcccgggc ttcgtcgccc aaggcacgtc gggcagtggc
     1081 aatatcggcc aggcgacgcc ggtaccaccg ccaatacagc aggatcaatc ccgatgaggc
     1141 gaaaaaaacc agcccgacaa ccgccagcat gccacgccga ctccaccagc ccagtagtgc
     1201 aagggcggcg ccatcgaagg cgagcactgc cgccgcgata acggtcagag ctcgggagac
     1261 ggtgggcgac acctccagct cagcgaaccg gacgccgtcg gcgcggcatc acaatgagcg
     1321 ctccgttggg aac
//
LOCUS       DASRPQ010001002         1130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3567815, whole genome shotgun sequence.
ACCESSION   DASRPQ010001002 DASRPQ010000000
VERSION     DASRPQ010001002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3567815"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..606)
                     /locus_tag="VFD73_11345"
     CDS             complement(94..606)
                     /locus_tag="VFD73_11345"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HZI74589.1"
                     /translation="MATRKSHKIDRIDLKILSALQDQGRMSNLELAAKAGLSASPAHA
                     RHRSLERSKVIQGYRADIDLAKLTDYVEILSFFTLHKHGRTQQGAFERLIERTPQAIA
                     CYQISGNFDYIVHFVCRSVGDYVELHHSLIEEEPNIASVTTNVIMAETKKFAGYPLKE
                     LIEPVEQAKE"
     gene            750..>1130
                     /locus_tag="VFD73_11350"
     CDS             750..>1130
                     /locus_tag="VFD73_11350"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF002636.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HZI74590.1"
                     /translation="MDLKAHIRHVPDFPKKGILFYDISTLLGHGPAWKETVNRLVTAI
                     TPMEPDLLVGIESRGFLVAAPLSYLMGCGFVMVRKRGKLPGDVIQHHYDLEYGTDTVE
                     IQAEAVRPGQRVVVLDDLLATGGTL"
BASE COUNT          185 a          347 c          375 g          223 t
ORIGIN      
        1 tatccgcctc gttccagcag attgtgtaga ggtgaatgcg aggcgtgcga tgccggaaca
       61 gcatcgccga ggctcttttg agccacgcca ttttcattcc tttgcctgct ccaccggctc
      121 gatcagctcc ttcagcgggt agccggcaaa cttcttggtc tccgccatga tcacgttggt
      181 ggtgacggag gcgatgttcg gctcttcctc gatcaggctg tgatgcagct ccacgtagtc
      241 tccgaccgag cggcagacga agtggacgat gtagtcgaaa ttgccggaga tctggtagca
      301 ggcgatggcc tgaggcgtgc gctcgatcag gcgctcgaag gcgccctgct gcgtacggcc
      361 gtgcttgtgc agggtgaaga aggacaggat ctcgacgtag tcggtgagct tggcgaggtc
      421 gatgtcggcg cggtagccct ggatgacctt gctgcgctcc agcgagcggt gccgggcgtg
      481 ggcggggctc gccgacagcc ccgccttggc ggccaactcc aggttgctca tgcgcccctg
      541 gtcctgaagg gcactcagga tcttcaggtc gatgcggtcg atcttgtgcg acttgcgtgt
      601 ggccatgcca tcccccaacg gagccaatgg cgcgatgctt aggcacaacg cggccgcacc
      661 gcaagtgccc ggctccatgc cctgctttcc aagggcggca tgggctgtta tctagggctg
      721 cgttgcactg tcagccgcca ggtgtcccga tggatctcaa ggcccacatc cgccacgtcc
      781 cggatttccc gaagaagggc atcctgttct acgacatctc caccctgctg gggcacgggc
      841 cggcctggaa ggagaccgtg aaccggctgg tgaccgcgat caccccgatg gagcccgatt
      901 tactggtcgg gatcgaatcg cgtgggttcc tggtggcggc gccactgtcc tacctgatgg
      961 gctgcggctt cgtcatggtg cgcaagcgcg gcaagctgcc cggcgacgtc attcagcacc
     1021 actacgatct ggaatacggg accgatacgg tcgagatcca ggccgaggcc gtcaggcccg
     1081 gccagcgcgt ggtcgtgctg gacgacctgc tggcaactgg cggcacgctg
//
LOCUS       DASRPQ010001003         1178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3263496, whole genome shotgun sequence.
ACCESSION   DASRPQ010001003 DASRPQ010000000
VERSION     DASRPQ010001003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3263496"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..605)
                     /locus_tag="VFD73_11355"
     CDS             complement(<1..605)
                     /locus_tag="VFD73_11355"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI74591.1"
                     /translation="MAVALEIRRDLFSPVELRSRARRERNPRTATRMLAIANALEGLT
                     RAEAARLAGIERQALRDAVMRYNQEGVEGLRDRPKPGRPPTRTDGEQALLRAKILQKP
                     GPQDGCREWTLPALCRWIEARFNKRLHPASLSRIVRALDLSRQKTRPMHPQADPKAQA
                     AFVNGGLAQAIAPAAQAHPDRKIALWFMDEARVGQKGRTGFR"
     gene            874..1047
                     /locus_tag="VFD73_11360"
     CDS             874..1047
                     /locus_tag="VFD73_11360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74592.1"
                     /translation="MVTVATVEQAGDGLVVHLRQDPARVDLEHLEELHAKDCNDLLKR
                     IARPDVTVTMPNV"
BASE COUNT          191 a          381 c          388 g          218 t
ORIGIN      
        1 cgaaagccgg tccggccttt ctgcccaacc cgggcctcgt ccatgaacca gagcgcaatc
       61 ttccgatccg gatgcgcctg tgcggctggt gcgatggcct gagctaaccc tccgttgacg
      121 aaggccgctt gagcttttgg atctgcttgc gggtgcatgg gtcgcgtctt ctgccgcgag
      181 aggtcgaggg cgcgtacgat ccgggacagg ctggccgggt gcaggcgctt gttgaagcgc
      241 gcctcaatcc agcggcacag ggcgggcaga gtccactccc gacagccgtc ctgcgggccg
      301 ggcttctgga ggatcttggc ccgcagcagc gcctgttcgc cgtcggttcg ggttggtggg
      361 cggcctggct tgggccggtc gcgcaagccc tcgacacctt cctgattgta gcgcatcacc
      421 gcgtcccgga gcgcctggcg ctctatgccg gccaggcgcg ccgcttcggc gcgcgtcagt
      481 ccctccaggg cattcgcgat ggccagcatg cgggtggccg tgcgggggtt gcgctcgcgc
      541 cgtgcccggg agcgcagctc aaccgggctg aacagatcac gtcggatctc aagcgctact
      601 gccatcccgt cctcctcctc aaaatcgaac aggacggaat cacaacctca ccccaaatta
      661 cagctgcaca cgagtccctt catccgcacg ccggtataac atcgcacgaa atgtggttgg
      721 cccaccgcgc tgctcctttc cagcgggaac cgatttgcgc acctgtctct tttcaggtcg
      781 gaggattctt gcggagccga cgatgacggt cattctgcgc ctgcattgtg atcagctcct
      841 tggggccgca tcgatcggga aacggcgacc ggaatggtga ccgtcgccac cgttgagcaa
      901 gcgggtgacg gcctcgttgt gcatctccgg caggatccgg cgagggtgga cctggaacac
      961 cttgaagagc ttcacgcaaa ggactgcaac gatctcctga agcggatcgc gcgtcccgac
     1021 gtgaccgtca caatgcctaa cgtgtgatgt ggccctatga caggagatct gaccggcaga
     1081 gtggtgctga ttacaggcgc gactgacggg ctcgggcgcg gggcggcgat ggctctggcc
     1141 cagcgcggcg ccacgctcct cgtgcatggg cgagaccg
//
LOCUS       DASRPQ010001004         1008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1372560, whole genome shotgun sequence.
ACCESSION   DASRPQ010001004 DASRPQ010000000
VERSION     DASRPQ010001004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1372560"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            271..690
                     /locus_tag="VFD73_11365"
     CDS             271..690
                     /locus_tag="VFD73_11365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74593.1"
                     /translation="MGEVEWERARLFPVSGIGGADEQERRAASALLAVVQSVREFGRA
                     ITVPMGAPTGRLSAYIEVPFSDGDKKLRPDGLLQVVSAQRTWTALVEVKTGRHALIPG
                     QIENYLDVARKHKFDALLTISNQVVATPGVHPVRLPG"
     gene            750..>1008
                     /locus_tag="VFD73_11370"
     CDS             750..>1008
                     /locus_tag="VFD73_11370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74594.1"
                     /translation="MEQSNKSVSDPDQAWILAEFNRYLEHPRSGALDFDDMGSSWVHV
                     RDHARTGTLHPNDKGAAEVADRFGGLVSFAAMRLSRDLGTIV"
BASE COUNT          175 a          311 c          338 g          184 t
ORIGIN      
        1 gatcgaggcg gggcgaacgg cgtgaatgcg tcatttgctt cgttttgtct ccctacgcag
       61 gctgacaaag ggatagcgga gaaacgccgc gtgtaatgcc tgcagcagca ggctacggtg
      121 cgcagtgcgg ctgatctttc gttctccggc cgcatgtgct agttgcccgg agggcatctt
      181 tcgcgatatt ccggtaatcc acgtgtcctg gctgggtgtc ttttaccatg catgtaactc
      241 agtgcaaatg ccctggcgtg gggagcggat atgggcgaag tcgagtggga gcgtgcccgg
      301 ttgttcccgg tgtccggaat cggcggcgcg gatgagcaag aacgccgggc ggcttcggcg
      361 cttctggccg tggtgcagtc ggtccgggaa ttcggccgcg cgataacggt cccgatgggc
      421 gcgccgaccg gccggctgtc agcctacatc gaagtcccgt tcagcgacgg ggacaagaag
      481 ctgcggcccg atggcctgct gcaggtggtg tccgcacaac ggacctggac cgcgctggtg
      541 gaggtcaaga ccggccgcca tgcgctgatc cccggccaga tcgagaacta cctggacgtg
      601 gcccgcaagc acaagtttga tgcgctgctg accatctcga atcaggtggt ggccacgccg
      661 ggggtgcatc cggttcggct gccagggtaa agacgcaagc ggtccggctc catcacctgt
      721 catggagcca gatccggacc gaagcgctga tggagcagtc gaacaaatcg gtcagtgacc
      781 ccgatcaggc atggatcctg gccgagttca accgctacct ggaacacccg cggtctggcg
      841 cactggactt cgacgacatg ggctcctcct gggtccacgt ccgcgatcac gcccgcaccg
      901 gcaccctgca cccgaacgat aaaggcgccg ccgaggtcgc agaccggttc ggcggcctgg
      961 tctcgtttgc cgccatgcgg ctatcccggg acctcggcac catcgtcc
//
LOCUS       DASRPQ010001005         1087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4192887, whole genome shotgun sequence.
ACCESSION   DASRPQ010001005 DASRPQ010000000
VERSION     DASRPQ010001005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4192887"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..571
                     /locus_tag="VFD73_11375"
     CDS             <1..571
                     /locus_tag="VFD73_11375"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI74595.1"
                     /translation="SLLLHARWWPGPQSRAPLAPSDQPLWRRRLGSLLGSDRNEWRAR
                     RVDWVLGAALAIRRAAFTSVGGFDEAYFLYQEEIDLCYRLRADGWEVHYVPAATVLHV
                     GGASTSQWAIETFAQFVRSTQRFARLRFTRARATGVRAVLGSVLLTRLALETARLASA
                     RDGAPRDRIRERAAAWRRGLAVLRERSES"
     gene            complement(568..>1087)
                     /locus_tag="VFD73_11380"
     CDS             complement(568..>1087)
                     /locus_tag="VFD73_11380"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI74596.1"
                     /translation="GVDLLLRAFARLLSSRPAARLRIVGDGPRRSALEALAADLGIDQ
                     AVRFSGRLPFPEVEVALSTSWALVAPSLWPEPLGLVAIEAITHGIPAIASASGGFTET
                     IAHAKTGYLVPTGDVHALAECLASVAERGPMTLPSDLVQELQQRHDAGQHARMLETVF
                     RDAIQLHGKGKN"
BASE COUNT          175 a          357 c          346 g          209 t
ORIGIN      
        1 atcgctcttg ctccatgccc gctggtggcc agggccccag tctcgagcgc cgctcgcccc
       61 gtctgaccag ccattatggc gacgacgtct gggatcgctc ctcggctcgg accgcaatga
      121 atggcgcgct cggcgagttg actgggtgct cggtgctgcg ctcgccatcc gtcgagccgc
      181 cttcacgtcg gtcggaggct tcgatgaagc ctactttctc tatcaggaag agatcgatct
      241 ctgctatcgg ctccgtgcgg acggttggga ggtccactat gtccccgctg caaccgtcct
      301 ccatgtggga ggtgccagca ccagccaatg ggcaatcgaa accttcgctc agttcgtccg
      361 cagcacgcag cgctttgccc ggcttcgctt cacccgcgcc cgagcgaccg gcgtgcgcgc
      421 tgttctggga tccgtgctgc tgacgcggct ggctctcgag actgctcgcc tggcctcggc
      481 gcgtgatgga gcgccccgag accgcattcg agaacgagca gccgcctgga gacgagggct
      541 ggcagtgctg cgagagcggt ccgagtctta gttcttgccc ttcccgtgca gttggatagc
      601 gtcgcggaac actgtctcga gcatcctggc atgctggccg gcatcgtgcc gttgctgtaa
      661 ttcctgaact aagtcgctgg gcaatgtcat cgggccgcgc tcggccacgg atgctaggca
      721 ttcggccagc gcgtgcacgt caccagtagg caccaggtaa cccgtcttcg catgggctat
      781 cgtctcggtg aaaccgccgc tggcgctggc aatggccgga atcccatgtg taatggcctc
      841 gatcgctacc agtcccaatg gttcaggcca gagcgaggga gccacgagtg cccatgaagt
      901 gctgagtgct acctcgacct ccggaaaggg aagtcggcca ctgaatcgga ccgcctgatc
      961 gatgccgaga tcggccgcga gtgcctccaa cgctgatcgg cgcggaccat ctcccacgat
     1021 gcgcagccgt gctgccggcc ggctgctcaa gagtcgggcg aaggccctga gtagcaggtc
     1081 gacgcct
//
LOCUS       DASRPQ010001006         1213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_120843, whole genome shotgun sequence.
ACCESSION   DASRPQ010001006 DASRPQ010000000
VERSION     DASRPQ010001006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120843"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..611
                     /locus_tag="VFD73_11385"
     CDS             <1..611
                     /locus_tag="VFD73_11385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74597.1"
                     /translation="RAVLKLGLYTGYSGEPEKALRLLQRGLKMVDESFEPEIVFFAVH
                     NQLWFTVECGRYEEAQKLVFLNRWRYQGAARLNRIKLRWMEGRIDAGLGKHERAVDVF
                     REVRDDFAEASQDFPSALTTLDMALSLLRLGRAGEARDVVLEAAQTFRSLEIEREMLL
                     AVLFLHQTFSLGLAKASVLEDVIDFLQKAEHNPEAKFEPRPL"
     gene            complement(640..1059)
                     /locus_tag="VFD73_11390"
     CDS             complement(640..1059)
                     /locus_tag="VFD73_11390"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI74598.1"
                     /translation="MLKTAMKVLGFTNRDVERKLGLSGSYLSRLFSGMIDLKVDHVVA
                     ISRVVGMEPEEMIQIAFPRKKKPSTPAAARLRETLEEYQRTGNAPWGGSLNLADLEFE
                     EVEPPAQQKSESGGGDLEQVLEKMMAKALHKVLDRMG"
BASE COUNT          200 a          414 c          376 g          223 t
ORIGIN      
        1 gccgagccgt cctcaagctg gggctttaca ccggctactc cggagaaccc gagaaggctc
       61 tccggctcct ccagcgcggc ctcaagatgg tcgacgagtc attcgagccc gagatcgtct
      121 tcttcgcggt ccacaaccaa ctctggttca cggtcgaatg cggccggtac gaggaggcgc
      181 agaagctcgt cttcctgaac cgctggcgct accagggggc agcccggctg aaccggatca
      241 agctgcgctg gatggagggc cggatcgacg ccggcctggg caagcacgag cgggccgtgg
      301 atgtgttccg cgaggtgcgg gacgacttcg cggaggccag ccaggacttc ccctccgcgc
      361 tgaccacgct cgacatggcg ctctcgctcc tgcgcctggg cagggccgga gaggcccggg
      421 acgtcgtcct ggaggccgca cagaccttcc ggtccctgga gatcgagcgg gagatgctgc
      481 tggcggtgct gttcctgcac cagaccttct ccctgggcct cgcgaaggcc agcgtgctgg
      541 aggacgtgat cgacttcctg cagaaggcgg agcacaaccc ggaagcgaag ttcgagcccc
      601 ggccgctctg aaaccccctc cccggggagg gggtcttctt caccccatcc ggtcgaggac
      661 cttgtgcagg gccttggcca tcatcttctc gagcacctgc tccaggtctc cgccgccgga
      721 ttccgacttc tgctgcgccg gcggctccac ctcctcgaac tccaggtcgg ccaggttgag
      781 cgagccgccc cagggggcgt tgccggtccg ctggtactcc tccagggtct cgcggagacg
      841 cgcggcggcg ggcgtcgacg gcttcttctt cctcgggaag gcgatctgga tcatctcctc
      901 cggctccatc ccgaccaccc tcgagatggc cacaacatgg tccaccttca ggtcgatcat
      961 cccggagaac aggcggctga gatagctgcc gctcaggccg agcttcctct cgacatcacg
     1021 gtttgtgaaa cccagcacct tcattgcagt cttcagcatg gaccgaaggc gccggacttc
     1081 caggctgggc tcagacgtgg tttcaacctt ttttcttttt ggcgacattg tggccggatg
     1141 gtagcaccaa gcacagccat cgcacaacca ctcgtccaat cctgggctat aatggccttc
     1201 tcatccgcgg aac
//
LOCUS       DASRPQ010001007         2669 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3569428, whole genome shotgun sequence.
ACCESSION   DASRPQ010001007 DASRPQ010000000
VERSION     DASRPQ010001007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2669
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3569428"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..639
                     /locus_tag="VFD73_11395"
     CDS             <1..639
                     /locus_tag="VFD73_11395"
                     /inference="COORDINATES: protein motif:HMM:NF016557.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HZI74599.1"
                     /translation="LYLDGGALIDEPSRERLAALAEALPPAMQVPRLTTASADEARRF
                     LQSALDGGHEGIMAKSLDAPYEAGHRGRRWLKIKPANTLDLVVLAAEWGHGRRHGSLS
                     NLHLGARDPVNGGFVMLGKTFKGMTDEMLQWQTKRLLELEVARDGITVYVRPELVVEV
                     AFNEVQESTQYPGGVALRFARIKRYRSDKLARDADTIESVRQIYRRTGGTAV"
     gene            722..1285
                     /locus_tag="VFD73_11400"
     CDS             722..1285
                     /locus_tag="VFD73_11400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74600.1"
                     /translation="MVNLGSLWLPILLSAVLVFIVSSLIHMVLKYHASDYKQLPNEDA
                     IRAAIRGGNPEPRQYIFPYAAGMREMETPEMQKKYQEGPVGVLNLRRPGPVRMGPPLG
                     QWFLFSLIVSFFIAYIAAHSIPPGTRYLEVFRIVGAIGFLAYAAGQVPAAIWMGKPWS
                     IAWKEVLDGLLYGLVTAGTFGWLWPGR"
     gene            complement(1393..1785)
                     /locus_tag="VFD73_11405"
     CDS             complement(1393..1785)
                     /locus_tag="VFD73_11405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74601.1"
                     /translation="MEPRVFAHSQSYRLRERMNEAEIHHGQEVRADLSGIRVTAAFEG
                     WRPSADPTTGVIFFCTMGPIRIREVLNPGDGEALPTEVVLEGLAVPGPGTYDIMNALI
                     HSNGALRVRADSATRIVPRTLGLNQSWV"
     gene            complement(1902..2168)
                     /locus_tag="VFD73_11410"
     CDS             complement(1902..2168)
                     /locus_tag="VFD73_11410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74602.1"
                     /translation="MGFFGMLFWIAVLWFAIRALRRSDRCVAVGARGYWPGWSGSHRA
                     EMRETSRTGRTGRTDRDDYIDSLETRLSQLEERLDFTERLLEGR"
     gene            complement(2188..>2669)
                     /locus_tag="VFD73_11415"
     CDS             complement(2188..>2669)
                     /locus_tag="VFD73_11415"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HZI74603.1"
                     /translation="ILRLLKEKPRHGYEVIKALEEKFGGYYTPSAGTVYPTLQLLEDE
                     GYVRAVETDGKKVYHITPEGETYLDNHRDLLEDILDRVRETVRDFTGGGLGEVQGSFV
                     HLAGVTFKRAWRRGPDDPALKRVSEILRKAAADIEQAWGGGEGAGQRGSGSGAEQAS"
BASE COUNT          497 a          857 c          806 g          509 t
ORIGIN      
        1 ttgtacctgg atggaggggc cctgatcgat gagccttcac gcgagcggct ggcggccctc
       61 gccgaggcac tcccgccggc aatgcaggtg ccgcgattga ccaccgcatc tgccgacgag
      121 gccaggcgat ttctgcagag cgcgctcgac ggagggcacg aaggaatcat ggccaagtct
      181 ctggacgcgc cgtacgaggc cggtcaccgg ggaagacgct ggttgaagat caaaccggca
      241 aacaccctgg acctggtggt gctcgcggcc gagtggggtc acggccgacg ccacggttcg
      301 ctcagcaatc tccacctcgg cgccagagat ccggtaaatg gcggattcgt catgttgggc
      361 aagacgttca agggcatgac cgacgagatg ctgcagtggc agaccaaaag gctgctggag
      421 ctggaggtcg cccgcgatgg aatcaccgtc tacgtgcggc cggaattggt ggttgaggtg
      481 gcgttcaacg aagtgcagga aagcactcaa tacccgggtg gtgtggcgct ccgcttcgcg
      541 cggatcaagc gatatcgcag cgataagctg gcccgcgacg ccgataccat cgaatcggtg
      601 cgacagatct atcgtcggac cggaggcacc gcggtgtagg ctgcagagct tgcgcactcc
      661 ggagggcctc tgcagcttat cggcgccctc ccccactcga cagcgatcac ctggagtgcc
      721 catggtcaac ctaggttcgc tctggcttcc gatcctcctc tccgccgtcc tcgtgttcat
      781 cgtcagcagc ctgatccaca tggttctcaa gtatcatgcg agcgattaca agcagttgcc
      841 caacgaggac gccatcaggg ccgcgattcg cgggggcaat ccggaacccc ggcagtacat
      901 ctttccctat gccgcgggca tgagggaaat ggagacgccg gagatgcaga agaaatatca
      961 ggagggccca gtgggcgttc tcaatctgcg gcgcccggga cctgtcagga tgggaccacc
     1021 cctcggccag tggtttctct tctctctgat cgtttccttc tttatcgcct acatcgccgc
     1081 ccattcgatt ccgccaggta cgcgctacct ggaggtgttc cgcattgtcg gcgcgatcgg
     1141 gttcctggcg tacgcggcag gccaggtgcc ggcggccatc tggatgggga aaccgtggtc
     1201 cattgcctgg aaggaagtac tcgacggatt gttgtacgga ctggtgacgg cgggaacgtt
     1261 cggctggctc tggccggggc gctgaagtgc ggtaagcggt gagcggtaag cggtgagcgg
     1321 taagcggtga gcggtgagag tcaagaagag cgaagccact cctctcagat ctcaccgctc
     1381 accgcttacg tattacaccc agctctggtt gagccccagc gtacggggga cgatgcgggt
     1441 agcggaatcg gctctcacgc ggagggcgcc attggagtga atgagcgcat tcatgatgtc
     1501 gtaggtgccg ggacccggaa ccgccagccc ctccagaacc acctcggtcg gaagcgcctc
     1561 gccgtcaccc ggattgagga cctcgcgaat ccgaatgggg cccatggtgc agaagaaaat
     1621 cactccagtg gtcgggtcgg cgctgggtcg ccatccctcg aacgcggccg tcacccgaat
     1681 accagacagg tcggccctca cttcttgtcc gtgatgaatc tccgcctcgt tcatgcgctc
     1741 gcgaagacga taactctggg aatgcgcaaa gacgcgtggc tccatatgtc cccctcaagg
     1801 ttgcccaagc tctcgggcgt accatccaaa ctgcagattt acgttatgag cttgggcggg
     1861 ccttgtcggt gggcagcgtg cggctccctg agtggcttac gtcaccggcc ttccagcagc
     1921 cgctcggtga agtccagcct ttcctcgagc tggctgagtc tggtctccag cgaatcgata
     1981 tagtcgtccc ggtcagtccg accagtccga ccagtccgcg acgtttcccg catttccgct
     2041 cgatggctgc cggaccagcc aggccagtac cctctcgcgc ccaccgctac gcaacggtcc
     2101 gaccttcgca atgccctgat cgcgaaccag agcaccgcaa tccagaacag cattccgaag
     2161 aagcccatgg cttgctccct ttcgtcgtca gctcgcctgc tctgccccgc tcccagaccc
     2221 gcgctggccc gctccctcgc caccacccca ggcctgctcg atatccgccg cggctttacg
     2281 caggatctcg gaaacgcgtt tcaaggcggg atcgtcgggc ccgcggcgcc acgcccgctt
     2341 gaaggtgacc ccagcgagat ggacaaatga tccttgcacc tcacccaatc cgccaccggt
     2401 gaaatcgcgc accgtttcac gtacacggtc caggatgtcc tccaggaggt cgcgatgatt
     2461 gtccaagtag gtctctcctt ccggagtgat gtgatacact ttcttcccat ccgtctccac
     2521 cgccctgacg tacccttcgt cctcgagcag ctggagagtg ggatacaccg ttcctgccga
     2581 cggggtgtaa taccccccga acttctcctc caaagccttg atcacttcgt agccgtgccg
     2641 gggcttctcc ttcaacaggc ggagaatca
//
LOCUS       DASRPQ010001008         1147 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2008456, whole genome shotgun sequence.
ACCESSION   DASRPQ010001008 DASRPQ010000000
VERSION     DASRPQ010001008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2008456"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..471)
                     /locus_tag="VFD73_11420"
     CDS             complement(<1..471)
                     /locus_tag="VFD73_11420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZI74604.1"
                     /translation="MFLRSKIRRKDGKVHRTWSLVENRRVRGNRIVQRQVLYLGEIND
                     TQKAAWSRTIEAFADDRTQAQQLTLFPEGCSIAVPDSEVVEVRLGSLEIRRPRQWGGC
                     WLACQLWDHLGLEEFWSDRLVPSRKGTRWLNVFKTLVVYRLLDPGSEWRLHRQWF"
     gene            628..1147
                     /locus_tag="VFD73_11425"
                     /pseudo
     CDS             628..1147
                     /locus_tag="VFD73_11425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611592.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          215 a          403 c          326 g          203 t
ORIGIN      
        1 aaaccactgg cggtgcagcc gccattcgct gcccgggtcc agcaatcggt aaaccaccag
       61 cgtcttgaac acgttcagcc agcgcgtgcc cttgcggctg ggtaccagcc ggtccgacca
      121 gaactcctcc agccccaggt ggtcccacag ctgacaggcc agccagcatc cgccccattg
      181 ccgggggcga cgtatctcaa ggctgcccag gcgaacctcg accacctcac tgtccggtac
      241 cgcgatcgag catccctccg gaaacagcgt caactgttgg gcctgcgttc ggtcgtccgc
      301 gaacgcctcg atcgtccggc tccacgccgc cttctgcgtg tcgttgatct cgcccagata
      361 gagaacctgc ctctggacaa tccggtttcc ccgcacccgc cggttctcga cgaggctcca
      421 cgtgcgatga accttgccgt ccttgcgacg gatcttggat cgaagaaaca tgcccgcaga
      481 ctcagcggcc ctcccggcca agtcaaccgg gtaggtcggc actacaggcc agtttcacca
      541 tcgcctgcct ccaaacccca gcaaacccgc cacttccatg cccgaatgcc ggtcatttct
      601 cccgatttcg ccgccgaatc gctgaagccg ggctacggct cgcgccgcat ggcggcgtgg
      661 ctgactaccc agggctttcc cgtcaaccgc aagcgggtgc agcgcctgat gcggttgatg
      721 ggactggtgg ccatctacca acgccccaac accagcaagg cggcgcccga gcacgccaag
      781 tacccatatc ttctcggcgg cctgacgatc gaccgcgcca accaggtctg gtgcagcgat
      841 atcacgtata tcccgctcgc caggggcttc atctacctgg tagcgatcat ggactggcac
      901 tcgcgggcgg tgctggcctg gcggctttcg aacacgctgc atgccgactt ttgcgtcgag
      961 gctctggaag aggcgctgcg ccggtttggc agaccggaga tcttcaacac cgatcagggc
     1021 agccagttca ccagcaccga cttcacgggt gtgctgaagg cccacggcat ccggatcagc
     1081 atggacggca agggccgatg catggacaac gtcttcatcg agcggctttg gagaagcttg
     1141 aaatacg
//
LOCUS       DASRPQ010001009         1691 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3264639, whole genome shotgun sequence.
ACCESSION   DASRPQ010001009 DASRPQ010000000
VERSION     DASRPQ010001009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3264639"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            565..900
                     /locus_tag="VFD73_11430"
     CDS             565..900
                     /locus_tag="VFD73_11430"
                     /inference="COORDINATES: protein motif:HMM:NF039700.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6247 family protein"
                     /protein_id="HZI74605.1"
                     /translation="MALRRRFARYSSYYGRMAAEPVEHYEDPLDPQRILRELPGQERA
                     NFLAAYREALDGARDPAGWGNLRRVLRLWSGMVVATNRPGFYEAQEAALAGTGGGMLL
                     EDYIRLRHT"
     gene            903..1151
                     /locus_tag="VFD73_11435"
     CDS             903..1151
                     /locus_tag="VFD73_11435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74606.1"
                     /translation="MSYRPYLESGALRQMQALPEQAFDMLVTLLVRICDDPYDPVFSA
                     PTGVPRRRVADVGDFGFIVFAVDEAAGLVRVFDLVWTG"
     gene            1317..>1691
                     /locus_tag="VFD73_11440"
     CDS             1317..>1691
                     /locus_tag="VFD73_11440"
                     /inference="COORDINATES: protein motif:HMM:NF025786.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Imm1 family immunity protein"
                     /protein_id="HZI74607.1"
                     /translation="MTESWKFDDAPATLTADAAIGQLSARIASQKLESWLTSSSGRLL
                     AVVTNTERAMVMLLDGEGDPGEHAIDPGADGSSSSGYVLANGQNDEYPDKDTVPLPEA
                     LRIVRHILTHGNPPADAAWRVDR"
BASE COUNT          304 a          532 c          554 g          301 t
ORIGIN      
        1 aagttgcagg gctgtgcgta cacctggaat tggaactgcg aacccgggcc ggcctgcagg
       61 cacaggttct gtggggcgcc tgccacgact tggataaata tccagggcac gtcagcacgg
      121 gcaggcgtcg ctgcggcggt gatgccgagc gccatccccg ctgccagcag caggccgacg
      181 gtccggcgtt gttttattag gcgcatagtt ttcctttcgc cacagggcgg tactggctcc
      241 gcacatcctg ccgggccgcg ctgaaacggc gctgaaatgc gatcttcgcc ctatggagcc
      301 gaggagccca ctgctaacgg tccacgcgga ccatgatcaa actagagttt tcccaggtgg
      361 gtgccagggg gctgaaccct gaaccaatgg gttaaaagtt cttcggccgg atgcagcggg
      421 cgctctacct gcacagatag cacaggtcaa tacccgtcaa aacgcccatg gcacccatat
      481 tcgcggccta ctcggtccac gaaccggtcc acgaattcgg gcatccgcta ggccacggta
      541 actacgtagc gccatcatca gccggtggcg ttgcgacgtc ggtttgctcg ctactcgtcg
      601 tactatggcc gcatggccgc cgagcccgtt gagcattacg aggacccgct ggacccgcag
      661 cggatcctgc gagagctgcc cggccaggag cgcgcgaact tcctcgctgc ctaccgcgag
      721 gcgctggacg gcgcgcgaga tccggctggg tgggggaatc tgcggcgcgt gctgcggctc
      781 tggagcggga tggtggtcgc cacaaaccgg cccggtttct acgaggcgca ggaggccgcg
      841 ctggccggga ctggcggcgg gatgctgctg gaggactaca tccggctgcg ccatacctag
      901 gcgtgagcta ccgaccgtat ctggagtccg gtgcgctccg gcagatgcag gccctcccgg
      961 agcaggcgtt cgacatgctc gtgacgctgc tggtcaggat ctgcgacgac ccgtacgacc
     1021 cggtgttcag tgcgccgacc ggagtgccgc gacggcgggt ggcggacgtc ggcgacttcg
     1081 ggttcatcgt gttcgcagtg gatgaggctg cgggtctggt ccgcgttttc gatcttgtgt
     1141 ggacaggctg agacgcagtt cagtgtctgt ttcccttacc cttcgcgcat gccatatccg
     1201 cagtggagct actttccgcg taacgtgagg ccgccttcct gagccatagc attcgttgag
     1261 gtcgtcgaga aagcggaagc caagatctcg actcagcccc gggaaagatc gtgctcgtga
     1321 ctgaatcctg gaagtttgac gacgcccctg ccacgctgac ggccgatgcg gcgatcggcc
     1381 agctcagcgc aaggatcgcc agccagaagc tcgaatcatg gctgaccagc tcgtctggcc
     1441 ggctgcttgc cgtcgtcacc aacacggagc gagccatggt catgctgctc gatggtgaag
     1501 gcgacccggg cgagcacgcg atcgatcccg gggccgacgg cagcagcagc agcggctacg
     1561 tcctagccaa cgggcagaac gatgagtatc ccgacaagga cacagtgcct cttccagagg
     1621 cgctacggat cgtccgccac atcctcaccc acggcaatcc accagccgat gcggcatgga
     1681 gggtcgaccg c
//
LOCUS       DASRPQ010001010         3986 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1374125, whole genome shotgun sequence.
ACCESSION   DASRPQ010001010 DASRPQ010000000
VERSION     DASRPQ010001010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3986
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1374125"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..782
                     /locus_tag="VFD73_11445"
     CDS             <1..782
                     /locus_tag="VFD73_11445"
                     /inference="COORDINATES: protein motif:HMM:NF025755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sugar-transfer associated ATP-grasp
                     domain-containing protein"
                     /protein_id="HZI74608.1"
                     /translation="PEVGATATGEPLRSAADLRECILRHGDEGFVFKPVEGIQGNKIL
                     VFVGRAEEDTLLTLGGERYDAEALVQFAGNGPRLEEHNPGANPVPFLLEERIRPHPRL
                     ADFIGPTLCSVRVQTLIARNGKPEIIAAVFKLQPGVSGVDQLVHGAVGCWVDLDTGRL
                     GRGRSRSTWEDVTVIPGTDTPFSGFQLPDWTAIKDVALRAAGAFPWARSIGWDVGVSD
                     RGPVLIEGNERWSPSLIQMPAPAGLLTGELAEVCHSLRDKR"
     gene            790..2157
                     /locus_tag="VFD73_11450"
     CDS             790..2157
                     /locus_tag="VFD73_11450"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HZI74609.1"
                     /translation="MEAQVTTPTLSEEDRYRQRTPKSRRFFAEAREYLPGGDSRSTLF
                     HRPYPAVLDRGDGCRIIDIDGNGLLDFTGNHSSLVHGYGHPEVMSAVKRQLGKGTCFP
                     GSSLPQLEMSRLLCRRIPSLERVRFTNSGTEATMNAIRAARAFTGRTRIAKVEGGYHG
                     TVDDVMISTHPSADEGGLQSRPRAAAGSKGLSPEAVGNVTVIPFNDAASARELIESQR
                     DSLSAVLVEPVLGSAGMIPAEAEYLQTLSEVTRRLGILLILDEVVSLRVSFGGAQEHF
                     GITPDLTILGKLIGGGFPLGAFGGRRDIMALFDPSQGTPAIPHPGSHNANPIGMVAGA
                     ATLELLTPKAIDELNTRGDDLRADMRRAFAEAGIPAQITGLGSLFAMHLTERPVRCYR
                     DTLGARTDLREQIFLGLYNEGILIDPRGVGNLSTALGEEEISRFSAALRAVLRRLGAS
                     VSFRM"
     gene            2196..2423
                     /locus_tag="VFD73_11455"
     CDS             2196..2423
                     /locus_tag="VFD73_11455"
                     /inference="COORDINATES: protein motif:HMM:NF022716.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3072 domain-containing protein"
                     /protein_id="HZI74610.1"
                     /translation="MSSRSQGKKPNPKNQSNTIKDPDEWTTGEEPMTGAQESYLHTLA
                     TEAGEDVEEDLTKAEASKKIDELREKTGRGD"
     gene            complement(2428..2865)
                     /locus_tag="VFD73_11460"
     CDS             complement(2428..2865)
                     /locus_tag="VFD73_11460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74611.1"
                     /translation="MSDELERFKAEAPAPVLEPAPRLLESDRPGRAHWVVVRTRPPTE
                     GDSVPPGTLLVTRFWHPRDRCWSENAFESLDHALRLFVDESGWVLRQQQALDGPNIYE
                     LIFEARREDFSRPSTEQMLEEVGLSPQEVAKLLNRIDQDPAPG"
     gene            complement(2894..>3986)
                     /locus_tag="VFD73_11465"
     CDS             complement(2894..>3986)
                     /locus_tag="VFD73_11465"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HZI74612.1"
                     /translation="VSAQPRTTAAGGRAGVPSLVIIAVVAAGAALFAAQEIFIPLALG
                     LLFTAAFRPVVRWSGEARVPAPVTATVVVLGCLGALGVGGFFLSRPLKTWMRQAPQTL
                     SAARGKLEKLRRPIKQVSQAVQKAQEQVTGEQKPPQQKGQSTAPATTGAGIPPFVGRV
                     FATTAGILGTLLQTVVILFLALATGDLFNRKLALLMPRPATGTSEQAVEEAEAVVRRY
                     LVVTALINLGQGVIVAGVMWLIGLPTPPLWGLLTFICEFLPYIGALFMVIALTVTGLA
                     TFDSIGHVLLAPAAYIIISTIQNNAVSPFAYGSGLKLNPLVVLLSVLLGWFLWGVAGA
                     FVAVPALAAVRVIAERLDRNSRLAAVLSE"
BASE COUNT          759 a         1281 c         1254 g          692 t
ORIGIN      
        1 atcccgaggt gggcgccact gccaccggcg aaccactccg gtcggctgcg gacctgcgag
       61 agtgtatcct gagacatggc gacgaggggt ttgtcttcaa gccggtcgaa ggaatccagg
      121 gcaacaagat tctcgtgttt gtcgggcggg cggaggagga caccctgctc accctcgggg
      181 gcgagcgcta cgacgccgaa gcgctggttc agttcgcggg caatggccca cggttggaag
      241 agcacaatcc cggtgccaat ccggtgccgt ttctcttgga ggagcgcatc cgtcctcacc
      301 cgcgtctggc cgacttcatc ggaccgacgc tctgctcggt ccgggttcag accttgatcg
      361 cacgaaatgg caagccggag attatcgccg cggtgttcaa gctgcagccc ggtgtgtctg
      421 gcgtcgatca actggtccac ggcgcagtgg gctgctgggt cgacctcgat accgggcgtt
      481 tgggacgcgg gcgcagccga tccacttggg aggacgtcac tgtgattccg ggcaccgaca
      541 cccctttttc cggcttccag cttcccgatt ggactgcaat caaggatgtt gctcttcgag
      601 ccgccggggc cttcccgtgg gcacgttcga tcggctggga cgtcggggtg tcggaccggg
      661 gaccggtcct cattgaaggc aacgagcgct ggtcaccatc gctcattcag atgccggctc
      721 ccgctggatt gctgaccgga gagttggccg aggtttgcca cagtctacgc gacaaacgat
      781 gaagccagca tggaagccca ggtaacaact ccgactctca gcgaggaaga ccgctatcgt
      841 cagcggacac ccaagtcccg ccgcttcttt gccgaagcgc gagagtacct gcccggcggc
      901 gactcgcgga gtaccctgtt tcatcggccc tacccggccg tcttggatcg cggcgatggc
      961 tgccgaatca tcgatatcga cgggaatgga ctgctcgatt tcaccggaaa tcattcttcc
     1021 ctggttcacg gctacggcca ccccgaggtg atgagcgccg tgaagcggca gctcggcaag
     1081 ggcacctgct tcccgggctc cagtctgccg cagctggaga tgtcacgtct gctgtgccgg
     1141 agaattccct cgctcgagag agtccgtttc accaactccg gcaccgaggc gaccatgaac
     1201 gccatccgcg ctgcccgagc cttcaccggc agaaccagaa tcgccaaggt ggaaggcggc
     1261 taccatggca cggtggacga cgtcatgatc agcactcacc catctgctga cgagggggga
     1321 ttgcaatcgc gccctcgcgc agccgccggc tccaaaggcc tctcgccgga ggcggtggga
     1381 aacgtcaccg tcatcccgtt taacgatgcg gcgagtgccc gcgagctgat cgagagtcag
     1441 agagattcgc tctcggcggt tctggtcgag ccggtgcttg gatccgcggg gatgatccct
     1501 gctgaagccg agtacttgca aaccctcagc gaggtcactc gccggctcgg catccttctg
     1561 attctggacg aggtcgtgag cctccgggtc tcgttcggcg gagctcagga acacttcgga
     1621 atcacaccag acctgaccat cctgggcaaa ctcattgggg gtggattccc cctgggagcg
     1681 tttggtggcc ggcgcgacat catggcgctc ttcgatccct cgcaaggcac ccccgccatt
     1741 ccccacccag gcagccataa cgccaatccg atcgggatgg ttgcgggggc agccaccttg
     1801 gagctcctga ctccgaaagc cattgatgag ctgaacacgc ggggtgacga cctgcgcgca
     1861 gatatgaggc gggcgttcgc ggaggccggc attcccgccc agatcacagg cctcggctcg
     1921 ctgttcgcca tgcatctgac ggagcggccg gtgcgatgtt atcgggacac gctgggcgcg
     1981 cgcaccgatc ttcgggagca gattttcctg ggactctaca acgagggcat tctgatcgac
     2041 ccgcggggtg tcgggaacct ctccacggca ctcggagaag aggaaatttc ccgcttctcc
     2101 gcagccctcc gcgcagtctt gcggcggctc ggggcttcgg tttcttttcg gatgtagtca
     2161 gactaggcga atatcagatc tcaggagagc atcagatgtc cagcagaagc cagggcaaga
     2221 agcccaatcc caagaatcag tccaatacca tcaaggatcc cgacgagtgg accacgggtg
     2281 aagagcccat gacaggcgcc caggagtcct atctccatac actggccacc gaggcgggcg
     2341 aagacgtgga ggaagatctc acgaaagccg aagcgtccaa gaagatcgac gagctccggg
     2401 agaagaccgg ccgaggcgac taggcgctca tccgggtgca gggtcctggt cgatacggtt
     2461 caacaatttc gccacttcct gcggactgag ccccacctct tcgagcatct gctccgtgct
     2521 gggccggctg aagtcttccc gcctggcctc aaagatcagc tcgtagatgt tggggccgtc
     2581 cagcgcctgc tgctgccgca acacccaccc gctctcatcg acaaagagtc gcaacgcgtg
     2641 gtccagcgac tcgaaggcgt tctcgctcca gcaccggtcg cgagggtgcc agaaccgcgt
     2701 caccaggagg gtaccgggcg gcacgctgtc gccctcggtc ggcggacgag tgcgcaccac
     2761 cacccaatgt gctcgtcccg gccggtccga ttcgaggagc cgcggcgctg gttccagcac
     2821 cggagccggc gcttcagcct tgaaccgctc gagctcgtcg ctcatcggcg ctggctgcgc
     2881 caacctgcgg tcttcattcg ctgagaaccg cggcaagacg ggaatttcga tccagtcgct
     2941 ccgcaatgac ccggaccgcg gccagtgcgg ggacggcgac gaatgcgccg gcaacgcccc
     3001 aaagaaacca ccccagcaga acactgagca ggacgacgag cgggttcagc ttgagaccgc
     3061 tgccgtatgc aaacgggctc accgcgttgt tctggatagt ggagatgatg atataagcgg
     3121 ctggtgccag gagcacatgc ccgatgctgt cgaatgtcgc gagcccggtg acggtcaggg
     3181 caatgaccat gaacagtgct ccgatgtaag gcaggaactc gcagatgaag gtcaggagac
     3241 cccaaagcgg gggcgttgga agaccaatca accacattac tcccgccaca atcacccctt
     3301 gcccaagatt gatcagagca gtcaccacca ggtaccgcct gacaaccgct tcggcctcct
     3361 cgaccgcctg ttcggatgtg ccggtcgccg gccggggcat gagcaaggcg agtttgcggt
     3421 tgaacaggtc tcccgtggcc agggcaagaa agaggatcac caccgtctgc aggagcgttc
     3481 ccaggattcc tgcagtcgtg gcaaagaccc ggccgacaaa cggcgggatt ccggcccccg
     3541 tcgtggcggg agcggtggac tgccctttct gttgcggggg cttctgctca ccggtgacct
     3601 gttcttgggc cttctgcact gcctgggaga cctgcttgat cggacgccgc agcttttcca
     3661 gctttcccct cgcggccgaa agcgtctggg gagcttgcct catccaggtc ttgagcgggc
     3721 gagacagaaa gaagcctcct acgccgagcg caccgaggca accgagcacc accacggttg
     3781 cggtcactgg agccggcacc cgggcctcgc cggaccagcg caccaccggc cggaacgccg
     3841 cggtgaacag caaacccagc gcgagcggaa tgaatatctc ctgggctgcg aacaacgcgg
     3901 caccggctgc caccaccgcg atgatgacga gactgggaac ccctgctctg cctccggcag
     3961 cggtggtccg aggctgggcg ctcacc
//
LOCUS       DASRPQ010001011         1473 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1374137, whole genome shotgun sequence.
ACCESSION   DASRPQ010001011 DASRPQ010000000
VERSION     DASRPQ010001011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1473)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1473)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1473
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1374137"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..276)
                     /locus_tag="VFD73_11470"
     CDS             complement(<1..276)
                     /locus_tag="VFD73_11470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74613.1"
                     /translation="MSQWRQFLHAQAATMLAVDFLHVDTVLLKRLYVLVYIEHGTRRM
                     HLGGVTAHPTAEWTMQQARNLALGLGERFQDVKFVIRDRGSNFTCAFD"
     gene            956..>1473
                     /locus_tag="VFD73_11475"
     CDS             956..>1473
                     /locus_tag="VFD73_11475"
                     /inference="COORDINATES: protein motif:HMM:NF025039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase N-terminal
                     domain-containing protein"
                     /protein_id="HZI74614.1"
                     /translation="MDTSVSGPEDPRPVFPAFDGGAWERVDGRRCEEEVRRLRSRIFK
                     AVQERDMATAVDLQKLMLRSWHNTLVSVRQVTQRNTGRKTAGIDGLVALTSQARAEMA
                     VRVHATMGSHQPSPVRRVYIPKASDKTKMRPLGIPVILDRCHQARVRNALEPGWEVSI
                     RKCVRRDRRSLG"
BASE COUNT          280 a          405 c          552 g          236 t
ORIGIN      
        1 gtcgaaggcg caggtgaagt tcgatccgcg gtcgcggatc acgaacttga cgtcctggaa
       61 tcgttcgccg aggccgaggg ccaggttacg ggcctgctgc atggtccact cggcagtggg
      121 atgtgctgtg acaccgccca agtgcatccg gcgggtgccg tgctcgatgt acaccagtac
      181 atacagccgc ttcagcagca cggtgtccac atgcaggaaa tcgaccgcga gcatcgtggc
      241 tgcctgcgcg tgcaggaact gccgccattg cgacacgagg tcgcacgtgg tgagtgagct
      301 agtcgaggag gtctggctga tgccggagac gtagctacgg gttgtgctcg acccgtcccc
      361 gccgtgacgt gcgtggccgg ttcctgaccg gtcgggtgcg gagctcacgg gaaagcccaa
      421 gggccgctgc tccagccatg gtggccacag gcgaggggaa ggaccggtat agggcgacta
      481 ccaggaaact cttgctgatg cctcgtcaag ttcacactcc gggctgggtt gtgtcgccgg
      541 ggtggcaggg accagccgtt gagaggcggc aggcggcggc cgcggatgga gcgtggccgg
      601 tgagcaccgc tgtccccggg gtacagagag cgcccggccc ggtctgggtc tcacgcgtgc
      661 ggaacgtgga aaccgtgcca tgggtccgca tctcaggcgc gggtatgcgc aggcggtgcg
      721 gtaagccgac cgtaaggggg gctgaattcc ctggcaggac agggtgctca aaaagcgaat
      781 gccggcagct gaaaggcagc aggaagtcag gggccgcagg atcgggaact cctcccggat
      841 ggtctttgca taactggccg gataccgggc cggtgcccgg gtccggaagg acgctgacgt
      901 gggcaggtga gcctttgaag cgaaacggaa gcaaatgccg gaactaaagg ataagttgga
      961 cacctcggtg agcggacctg aggacccccg gccggtattc ccggctttcg acggtggcgc
     1021 ctgggagcgt gtggacgggc ggcgctgcga ggaggaggta cggcggctgc gaagcaggat
     1081 cttcaaggcg gtgcaggaaa gggacatggc cacggctgtg gacctgcaga agctgatgct
     1141 gcgcagctgg cataacacgc tggtaagcgt gcgccaggtc acgcagcgca atacgggccg
     1201 caagaccgcg gggatcgatg ggctggtcgc gctgaccagc caggcacggg ccgagatggc
     1261 ggtgcgggtg cacgccacga tgggctcgca tcagccttcc ccggtccggc gggtgtatat
     1321 cccgaaagcc agtgataaga caaaaatgcg gccgctcgga attccggtta ttctggacag
     1381 atgccaccag gctcgggtcc gtaacgcgct ggaacccggg tgggaggtaa gtattcggaa
     1441 atgtgtgcgt cgagacagga ggtcgcttgg tga
//
LOCUS       DASRPQ010001012         1828 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2009237, whole genome shotgun sequence.
ACCESSION   DASRPQ010001012 DASRPQ010000000
VERSION     DASRPQ010001012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2009237"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..1031)
                     /locus_tag="VFD73_11480"
     CDS             complement(114..1031)
                     /locus_tag="VFD73_11480"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI74615.1"
                     /translation="MAALPENPALQQHAAASQSCWCETAAQRAAFSGRRVTVVRPSHG
                     WLSIDLQELWEYRDLIYFLVWRDIKVRYKQTALGAAWAVLQPLLTMVVFSLFFGRLSR
                     VPSDGVPYPLFSLAALVPWSFFSYGLSQSANSLVGSQNLIKKVYFPRLAIPLGTVLSG
                     LVDFGLGLLVLLAMMLAYGITPGWRALWTLPLLLLTLLTALGVGFWLSALNVQYRDVR
                     FIVPFLIQLWLFATPIAYPSSLLHEPWRTVYAINPLVGVVEGFRWALLRTDTAPGGML
                     VVSSLATLLIFLGGAMYFRRMESTFADLV"
     gene            complement(1126..>1828)
                     /locus_tag="VFD73_11485"
     CDS             complement(1126..>1828)
                     /locus_tag="VFD73_11485"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HZI74616.1"
                     /translation="EARAVDAGPGRILLEQPIDGRQIAALLGWRQESVATLIARVTDW
                     LVRWNRNTLRTRIADRGWLEEQLLQPAAALPSLRERPAYLAWLQQQCAQLAGQSVPVV
                     AAHNDLTMSNLLLTAEGELGVLDWEAAGERLPLADLFYTVVDAAAAQNQYRDRLEGFR
                     HCFEVGGRWSQLVNDAEGRIGGVTYTGPEVAALSFHACWLQHAAAEAAKRLPDEPRPF
                     LNILERIVDLSLRRD"
BASE COUNT          401 a          566 c          577 g          284 t
ORIGIN      
        1 gcgtgggccc gacgcacgag gtagtcgcgc agggtgggat atctctgctg acgcgctccc
       61 agttgatact gtttcccgag cagcgcgctg tgaatggcaa tgtcggtcac cggctacacc
      121 agatccgcaa acgtgctctc catccgacgg aagtacatcg ctccacccag gaagatgagg
      181 agcgttgcca gtgaggacac gacgagcatc cccccaggag cggtgtcggt ccgcagcaag
      241 gcccagcgga atccttctac cacgccaacc aacgggttga tggcgtacac ggtgcgccag
      301 ggctcatgaa gaaggctgct agggtatgcg atgggcgtcg cgaagagcca caactgaatc
      361 aggaacggga cgataaatcg cacgtcacgg tactggacat tgagcgctga gagccagaac
      421 ccaaccccta gggcggtcaa aagcgtgagc aggaggagtg gaagggtcca gagtgccctc
      481 cagcctggag tgatgccgta cgcgagcatc atggcaagga gcaccaatag cccaaggccg
      541 aaatcgacca ggcccgagag cacggttcca agtgggatgg ccagacgggg aaagtagacc
      601 ttcttgatca gattctggct gcccaccaaa ctgttggccg actgcgagag gccgtacgag
      661 aagaaactcc agggcaccag cgcggcaagg ctgaacagcg gatacggcac cccgtcggaa
      721 ggcacccggg acaaccgtcc aaagaacagg ctgaacacaa ccatcgtcaa aagcggttgc
      781 aggacggccc acgctgcgcc caacgccgtc tgcttgtagc gcaccttgat gtcgcgccag
      841 accagaaagt agatgagatc ccgatactcc caaagctcct gaaggtcgat cgaaagccat
      901 ccatgtgagg gtcggaccac ggtgacgcgg cggcccgaaa aggcagcgcg ctgcgcagcc
      961 gtttcgcacc agcaggactg ggaggcggcg gcgtgttgtt ggagtgcggg attttccggc
     1021 agagctgcca tcgtctcaat ttacacgtta gttgtcgacc ccacaggtga cgcaacacga
     1081 agcagaaccg cgaggcatcg caggttcgat gaagggaatc ggaggtcagt ccctgcgcag
     1141 ggagaggtcc acgatccgct cgaggatgtt cagaaatggc ctcggctcgt ctggcaacct
     1201 cttcgctgcc tcggcggctg cgtgctgtag ccagcacgcg tgaaaggaga gagcagcgac
     1261 ctcagggccg gtgtaagtca cgccaccgat ccttccctct gcgtcgttca cgagctgaga
     1321 ccagcgtcca ccgacctcga aacagtgccg gaacccctcg agtcgatccc ggtactggtt
     1381 ctgggctgcg gcagcgtcca caacggtata gaaaagatcg gcgaggggca gtcgctcgcc
     1441 ggccgcctcc cagtccagga caccaagctc cccttccgcg gtcaagagca ggttggacat
     1501 cgtgaggtcg ttgtgcgcgg ccacgaccgg cactgactgg ccggcaagct gagcgcactg
     1561 ctgctggagc caggctagat aggccggtcg ctcgcgcagc gacggcagag ctgctgccgg
     1621 ttgaagcagc tgttcctcga gccacccccg gtcggcaatg cgggtcctca gtgtgttccg
     1681 attccagcgc accagccagt cagtaactcg agcgatcaag gtcgcaaccg attcctggcg
     1741 ccatccgagc agcgcggcga tctggcgacc atcaatcggc tgctcgagga gaatcctgcc
     1801 cggccccgcg tcaaccgccc gcgcctcc
//
LOCUS       DASRPQ010001013         1018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1374235, whole genome shotgun sequence.
ACCESSION   DASRPQ010001013 DASRPQ010000000
VERSION     DASRPQ010001013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1374235"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..357
                     /locus_tag="VFD73_11490"
     CDS             <1..357
                     /locus_tag="VFD73_11490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74617.1"
                     /translation="SLIGYFLPVMNGPRVQVHCREGKRRSPDPGDLRAIYGGDPDRVP
                     VTAGPGGPIVPRDLTATPDRAARRRVTIISAPTGIPSGGTRGVPRGRAPATSAGELAL
                     SGQVTGWLPATQARLG"
     gene            704..847
                     /locus_tag="VFD73_11495"
     CDS             704..847
                     /locus_tag="VFD73_11495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74618.1"
                     /translation="MIWWRLLTCLAASLVVVRLPAGISALVRHERPAWVLSGEFQLKG
                     DPR"
BASE COUNT          170 a          327 c          348 g          173 t
ORIGIN      
        1 tcgctcatcg ggtatttcct tccggtcatg aacggaccgc gtgttcaggt tcactgccgg
       61 gaaggtaagc ggagatcacc ggatcctggt gatctccggg cgatctacgg tggagacccc
      121 gaccgcgtgc cagtcacggc cgggccaggg ggcccgatcg tccctcgcga cctgaccgcc
      181 acgccggacc gcgcggccag gagacgggtg acgatcatct cggcgcccac cgggataccc
      241 tcgggaggca ctcgaggagt tccgcgcggc cgggcacctg cgacctcagc tggcgagctc
      301 gctctgagcg gccaggtgac cggctggctg ccggccaccc aggctcgcct cggctgactg
      361 gcgaggcccg gccgggctcg catgctggca tcagtgggcg cttaacggag gaaggaatgg
      421 acccgctgca gagaattacg cgcagaactt atggataggc gctttagctg tcgtgcgtta
      481 ggagagccgg accgcaaatc accaggatca ggtcatggcc gctcaccttg atggcaggta
      541 tttcgcgcac acccggtcac tgtcacgaga aggtgccgtt cccgtgacca gtgccctagc
      601 acccggcccg ctcgctcggg aatcctttgc tcctgctcgg gcggcgggct ccaggggcag
      661 gaccatcaaa ccttcagtgc cccaggtccc atcgcgaatc accatgatct ggtggcgcct
      721 cctcacctgc ctggcggcaa gcctggtagt cgtccgcctc ccggcaggga tctcggcatt
      781 ggttcggcat gagcggcccg cctgggtgct gtcaggcgaa ttccagctga agggagatcc
      841 ccggtgagca gcgagcaatc ttgcggtagc cagccttgcc cgccgatagc gatgctagcg
      901 agcagcggcg gatgctccgg gagttggcgt cggcgcagcc gctgcccgcc tactggttca
      961 gcgggtctaa ggagagagag gtcatggtga aggcagtcag gtacgacgag ttcggcgg
//
LOCUS       DASRPQ010001014         1450 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1690839, whole genome shotgun sequence.
ACCESSION   DASRPQ010001014 DASRPQ010000000
VERSION     DASRPQ010001014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1690839"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..280
                     /locus_tag="VFD73_11500"
     CDS             <1..280
                     /locus_tag="VFD73_11500"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HZI74619.1"
                     /translation="EVQDLFQAPRMSDSAISHLSDNIVLLRYVQEQDSIHRAMSVIKS
                     RASHHEPGIRQFLIGHDGIVLADGLPIRSVPDIDPQNPASRPATHRDP"
     gene            528..1294
                     /locus_tag="VFD73_11505"
                     /pseudo
     CDS             528..1294
                     /locus_tag="VFD73_11505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041836501.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
BASE COUNT          253 a          481 c          452 g          264 t
ORIGIN      
        1 cgaagtccaa gatctcttcc aagctccacg catgtcggac tctgccattt ctcatctgtc
       61 cgacaacata gtgttgctca gatatgtcca agagcaggac tcgatccacc gggccatgtc
      121 agtcatcaaa tcccgcgcaa gccaccacga gcccggtatc cgtcagttcc tgatcggcca
      181 tgacggcatc gtgctggctg acggcctgcc gatccgcagt gtgccggaca tcgatcccca
      241 gaacccggca agtcgcccag ccactcaccg tgacccttaa ggaaaaagca gccgaggcga
      301 tccattcaat atccgtggca tcttgattta ttcgtggagt tcacgtcacc tccttcgttg
      361 gcagcctggc ggcgatctgc cgtagtttac tcagtgagcc ttttccatcc tgatcttggg
      421 tgagcctggc ataccggctg accagggcgg cgtggcgtct tgggggatag cgaagcccct
      481 ggtagatgaa gcgatcacca caacccttcg tctgcccagg ggcttcgatg cttttctacc
      541 gtgctgcttt gccgttgtcg cgcgcgacgc tggactacct ggccggagtg gtccgccgtc
      601 accgcaagaa gatcggctcg tgctggcgca agctgagccc tgggcggcag gcgctgctgg
      661 tcttggcgca cctgcgcacc ggggagacct tcgccgcgct ggccgccggg ttcggggtgg
      721 gcaccgcgac ggcctggcgg tatgtgcagg agaccgtggc cttgttggcc gcccgcgctc
      781 ccaagctgga cgccgtgctg ggcacggcga acaaggccgg gcatgcgttc gtcgtaatcg
      841 acgggacgct gatcccatcg accgggtggc cgccgaccgg ccgttctact ccggcaagca
      901 ccgcaagcac gggttgaacc tgcaggtcat cgccagctcg caggggcaga tcttgtgggt
      961 ctccggggcc ttgcccgggg ccgtgcacga cctgaccgcc gcgaggatct ggggcatcgt
     1021 gcgccgcctg gccgccgcgg ggttaatcac cttggcggac aagggataca tcggtgctgg
     1081 tgagccggtg atcaccccgt accgggggcg gaacaagccg ccctcgcaga aagccgccaa
     1141 ccgcgctcac gctcgcctgc gcgccccggg cgagcgggcc aacgcccagc tcaagacctg
     1201 gcacatcctg cgcaagctgc gctgctgccc ctggcgagcc gggcagctcg ctaaagccat
     1261 ccacgtcctt caaacccacg agatcggagg atgaaaagcg ctcagtggaa ggcagctggc
     1321 tagcgcgggc tagaactttc gaatcatccc ggggttaatt gatccgcacg cgaataagcc
     1381 aaggccctga cgcccattct tgcccgtttc ctcgcaggcg ccgatccctg gtgagtggcc
     1441 acggggtcaa
//
LOCUS       DASRPQ010001015         1077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3265787, whole genome shotgun sequence.
ACCESSION   DASRPQ010001015 DASRPQ010000000
VERSION     DASRPQ010001015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3265787"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1073
                     /locus_tag="VFD73_11510"
     CDS             <1..1073
                     /locus_tag="VFD73_11510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74620.1"
                     /translation="EWRIIHTNGGFLTDSLVQKPPTEAQGQSASNSTNSNTNNTSTSN
                     PANAANEPTQINAAVLQRPSDRPATPPGFGQTFGVQNPSAPQDQNAPLPSITLQPQSG
                     QGALPPITLQPGAVAQPGGLPPITLAPTAIAGGQNPGQIAPQNAGQLPGQARPPQNPI
                     VPFPGQAPGGLPGGIPGVPAGFQIDPNGQLVPTAPVPGQGIQGQPQNLPGQAQGIPGQ
                     PFTPQPPTSGPVQGSPSSALTAINQLLTGQRQTAPASPTFGANQIGAIAGIASTYKGP
                     SIKIYKDQQKYELWEFVFSPTATTGPGGGTPAAGLPQNGPGPGGTGQPAGPGTPPSTF
                     APSGTFGPGGGQQPTFGAVPGR"
BASE COUNT          230 a          377 c          308 g          162 t
ORIGIN      
        1 cggagtggcg gatcattcac accaacggag gatttctgac cgattccctg gtgcagaagc
       61 cccccacgga agctcaggga caatcggcaa gcaactcgac gaatagcaac acgaacaaca
      121 cgagcacctc gaaccccgcg aacgctgcaa acgaaccgac gcagataaac gctgcggtat
      181 tgcagcggcc cagcgatcgc ccggccacgc cgcctgggtt cggccaaacc ttcggtgtgc
      241 aaaacccctc ggctccgcaa gaccagaacg cgccgcttcc ttcgatcacc cttcagccgc
      301 aaagcgggca aggcgcactt ccgcctatca ccttgcaacc tggagcagtc gctcagcctg
      361 gcggacttcc tcccatcaca ttggcgccca ccgcaatagc gggtgggcaa aacccgggac
      421 aaatcgcgcc acaaaacgca ggacagcttc cgggccaggc tcggccgccg cagaatccaa
      481 ttgttccatt ccccgggcag gctcctggag gactaccagg cggaatccct ggggtgcccg
      541 cgggattcca aatagatccg aatggccagc tggtgccgac agcacctgtc cccgggcagg
      601 gcatccaggg gcagccacag aacctacctg gccaggcgca aggaattcct ggccagccct
      661 ttacaccgca gcctccaaca tcaggtccgg tccagggatc gcccagctcg gctctgaccg
      721 cgattaacca gctcttgacg ggccagcgtc agacggcccc ggcatcgcct acgttcgggg
      781 ccaatcagat tggtgcgatt gccggcatcg ccagtacgta caagggtccc agcatcaaga
      841 tctacaaaga ccagcagaag tatgagctgt gggagtttgt gttcagtccc acggcgacca
      901 caggaccagg tggcggaacc cctgccgccg gcttacctca gaacgggcca gggccgggcg
      961 gaaccgggca gcctgccgga cctggaactc ctccctcgac cttcgccccc agcggcacat
     1021 ttggtcctgg cggtggccag cagccgacgt tcggggctgt tcccggccgc tagtttc
//
LOCUS       DASRPQ010001016         4609 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2009453, whole genome shotgun sequence.
ACCESSION   DASRPQ010001016 DASRPQ010000000
VERSION     DASRPQ010001016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4609
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2009453"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1050
                     /locus_tag="VFD73_11515"
     CDS             <1..1050
                     /locus_tag="VFD73_11515"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HZI74621.1"
                     /translation="ARNAFRGGDEHASPGNCRDRFRGRPSGWAIALPGSPGEKPRYQP
                     RLFDEELRRAGATLLTGSVTEAADVDAAMRGCDLVYHLASPFGDILQPNRAYWDIEVN
                     GTRNVLQAAQQLGVRRVIHCSTQGVHGIITNPPGNEESPIAPRDYYCYSKVEGERVCQ
                     QFIAKGMDIVIVRPTSVYGPGDIRGWLQLFRMVSKGWFLMIGSGSTLNHPVYVENLVD
                     LFELSGTSPSAKGRVYLAGDEEAVTLTQLVKNVGSATGAQVRVLRFPWYGGAWCAAAV
                     VEVVCKAIGVKPPVFRRRLSWYKTNRSFRIERAKQELGYNPSVALPEGLGHTARWYRQ
                     AGYLAGLSPLTLLFG"
     gene            complement(1047..2861)
                     /locus_tag="VFD73_11520"
     CDS             complement(1047..2861)
                     /locus_tag="VFD73_11520"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthetase B"
                     /protein_id="HZI74622.1"
                     /translation="MGAIYGILGEGDSAELAKLSDRLVHRGSASAHWSLSPTVHLGTR
                     GTPEAIRQVDQGSIVFDGAIDNRAELSALFKRPPGSTVRPEEDPLLLLELYSTEGLEA
                     FQRIAGQFAAVLWDGRRLLLVRDRIGYAPLYFTLDRDRLIFASEYKALLGIESVAAHP
                     NRNAIQVIQSTKWVLPGATCLEDVYPVAPGTWMAVERSGIHTARFWDLPIRVVHQDDQ
                     RHIAALRSSFLETLGRQTAPYQRIGVSLSGGLDSAVMAAGARAVAAGKELHTFSAGYG
                     SDDRELVNAERVARELGTAHHPLVLDPADLPELLPWMVWYMEEPIGREDIAYLFVAAR
                     EAAQYVDLVLTGFGFDGLFAGLPRHRVADVALKVPPLAKPLREFYDYSVRSIPPRGVA
                     GRALKRAYFRGRDFPAPAVLGAAPLPRLSGFRSNGDQPLSTFLQQGFKLLPYQSMVER
                     LYTAAGVRFNAHHTDPSFLGTAFSIPDRLKIHGRTQKYVLRRACAGLLPESILQFGKS
                     FNRLRHDLHLSATLDQLAEELLSTSSVAERGLFDPGYVEKLRQRPGDKPYSQERAYRL
                     WTLLLTEMWSRMYLDNRGKSPASRIAPLHPLIGSGATS"
     gene            complement(2872..3693)
                     /locus_tag="VFD73_11525"
     CDS             complement(2872..3693)
                     /locus_tag="VFD73_11525"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HZI74623.1"
                     /translation="MSQATAEWAVALFNRSVLKQAKYRRVLELLEEPAGRASLDIGAD
                     NGVISYLLRQRGGRWFSADLDAGAVASIRELVHDDVYQLDGGATPFPDRAFDQIVIVD
                     FLEHIPDDRAFVRDLARILKPRGILIINVPHLKPHSVLNRVRHRIGLTDEWHGHLRPG
                     YSFDDLRRLLHPHFVIERSVTYSRAFSEMIDTALNGLYQLLKRRKREPTRSSKGTVVT
                     RSDLDKLRKEFRVLSALYPVFWAFSRMDALLPFQSGYKLMVRARLQDSPQQSSIR"
     gene            complement(3706..>4609)
                     /locus_tag="VFD73_11530"
     CDS             complement(3706..>4609)
                     /locus_tag="VFD73_11530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74624.1"
                     /translation="VLFVSTVAGGAMAVAGAQFQSERRFGLSLALIQSPNVVMLVAAL
                     IVLLTGGKRAWLPLLICAVGFVVAGIYGWTLLFRERAAKNARETWFPWSESLAVAGLN
                     AAGLMLIQLDRLIIPHVLPLRDLAIYGVLAAIAGSFFRVMQMGVGYSLMPRLRAARDL
                     SERRHLIAQEAKLVGVIVVAGSGFVWVVTPLVERWFLDGKYHLTGSLLLAAIISGITK
                     IANSFSKSTVTALATPSELSLVNVLGWVSIALAIPAAAFGARWGLAGVMYGVALGWLL
                     RALTAFYVTFRHLRLPVSIPVPAP"
BASE COUNT          953 a         1433 c         1424 g          799 t
ORIGIN      
        1 gcgcggaacg cgttcagggg aggagacgag catgcaagtc ctggtaactg cagggaccgg
       61 tttcgtgggc ggccatctgg ttgggcgatt gctctgccgg ggtcaccggg tgagaagcct
      121 cgatatcaac ccaggctctt cgatgaggag ctgcgccgcg ccggggccac gctgctgacc
      181 ggatcggtca ccgaagcggc ggatgttgac gccgccatgc gcggttgcga tctggtctat
      241 cacctggctt ctccttttgg ggatatcctg cagccgaacc gggcttattg ggatatcgag
      301 gtcaacggaa cccgcaacgt tctgcaggcc gctcagcaat tgggggtacg cagggttatc
      361 cactgcagta ctcagggcgt gcatggcatc atcaccaacc cgccagggaa cgaagagtct
      421 ccgattgcgc ctcgcgacta ctactgctac agcaaagtgg aaggagagcg ggtctgtcag
      481 cagttcatag caaaaggcat ggacatcgtc atcgtgcgcc cgacatcggt ctatgggccg
      541 ggcgacattc gaggctggct ccagctgttc cggatggtct ccaagggatg gttcctgatg
      601 atcggcagcg gatctacgct caatcatccg gtctatgttg agaacctggt cgacctcttc
      661 gagctaagcg ggacatcgcc cagcgcgaag ggacgggtgt atctcgccgg agatgaagag
      721 gccgtcaccc tgacccagct cgtcaaaaac gtcgggagcg caaccggcgc acaggtgcga
      781 gtgcttcgat tcccctggta cggcggcgcc tggtgtgctg ccgcagtcgt tgaagtcgtt
      841 tgtaaggcga ttggagtgaa gcccccggtg tttcgccggc ggttgtcctg gtacaaaacc
      901 aaccggtcat ttcgcatcga gcgagccaag caggagctgg gatacaaccc gagcgtggct
      961 ctgccggaag gacttggcca caccgcgcga tggtaccgcc aggctggcta cctggcaggc
     1021 ctgagcccgc tcaccctact gttcggctaa gaggttgcgc cactcccaat caggggatga
     1081 agcggcgcaa tcctggaggc aggtgacttg ccgcgattgt ccaggtacat cctgctccac
     1141 atttcggtga ggagcaatgt ccatagccga taggctcgct cctgagaata cggcttatcc
     1201 ccagggcgct gcctcagctt ctcgacgtac cctggatcga ataaccctcg ttccgccacc
     1261 gagctggtag acagaagttc ctctgccagc tggtccagcg tcgcgctcag gtgcaagtcg
     1321 tgccggaggc ggttgaagct ctttccgaac tggagaatcg actcgggcaa aagtccggcg
     1381 caggctctgc gcaggacgta cttctgcgtt cgtccgtgaa tcttcaatcg atcgggaatc
     1441 gagaacgcgg ttcccaggaa gctgggatcg gtatgatgag cattgaatct cacgcctgct
     1501 gcggtgtaca accgctcgac catcgactga tagggcagga gcttgaaccc ctgctgtagg
     1561 aacgtgctca acggctggtc gccattgctg cgaaagcccg aaagccgcgg cagcggcgca
     1621 gcgccgagga ctgccggggc cgggaagtcg cgtccccgga aataggctcg tttgagtgcg
     1681 cgccctgcca cgccccgggg gggaatgctg cgcacgctgt agtcgtagaa ctcccgaagc
     1741 ggttttgcca ggggcgggac cttcagggcc acatccgcca cgcggtgccg gggcaaacca
     1801 gcgaacaggc catcgaagcc aaagccggtg agcaccagat cgacgtactg agccgcctcc
     1861 cgcgctgcga caaagaggta ggcgatgtcc tcccttccga tcggctcctc catgtaccac
     1921 accatccaag gcaggagttc aggaaggtcc gccggatcga gcacgagtgg atggtgtgcc
     1981 gtgccgagct cacgagcgac ccgctccgca ttcaccaact cgcggtcatc gctgccgtag
     2041 ccggcactga aggtgtgcag ctccttcccg gcggccaccg cccgagcgcc ggccgccatc
     2101 accgccgaat ccaatcctcc actgagcgac actccgatgc gctggtaggg cgccgtctgc
     2161 cgaccgagcg tttccaggaa cgacgatcgc agcgcggcaa tgtgacgctg gtcgtcctgg
     2221 tgcactaccc ggatcgggag gtcccagaat cgagcagtat ggatgccgct ccgctcgaca
     2281 gccatccagg tacccggggc gacgggatac acatcctcca gacaggtggc gccagggagg
     2341 acccacttgg tcgattgaat gacctgaatg gcgttccggt tggggtgagc cgccacgctc
     2401 tcgatgccga gcagcgcctt gtactcgctg gcgaagatca ggcggtcgcg gtcgagggta
     2461 aaatagagcg gcgcgtagcc gatccgatct ctgaccagca ggagtcgtcg gccatcccat
     2521 aagacagcgg cgaactggcc ggcgatcctt tggaacgcct cgaggccctc cgtcgagtac
     2581 agttccagca ggaggagcgg gtcttcctcg gggcgaaccg tcgaccccgg cggccgtttg
     2641 aacaacgcgc ttagctctgc tcggttatcg atcgcaccat cgaagacgat actgccctgg
     2701 tcgacctggc gaatcgcctc gggggttcct cgagtcccga gatggacggt cggagaaagc
     2761 gaccagtgcg ccgacgcgct gccgcggtgt accagccgat cgctcagttt ggcaagctcg
     2821 gccgaatctc cttcccccag aattccatag atcgctccca tacaccaaac cttaccggat
     2881 tgacgattgc tggggagagt cctgcagtct cgctcgcacc atcagcttgt accccgactg
     2941 gaatggcagc aatgcgtcca tgcgagaaaa ggcccaaaac accggataca acgcggagag
     3001 tacccggaat tccttccgca gcttgtcgag atcgcttcgg gtcaccaccg tgcccttgct
     3061 ggacctagtg ggctcccgtt tccgccgctt tagcagttga tagagaccat tcagggcggt
     3121 gtcgatcatc tccgagaatg cccgggagta cgtcaccgaa cgttcgatca cgaaatgcgg
     3181 gtgcaacagc cggcggagat cgtcgaagct gtacccaggc cggagatgtc catgccattc
     3241 gtcggtcaag ccaatgcggt gccgaacccg attcaggacc gagtgaggct tgaggtgagg
     3301 cacgttgatg atgaggatgc cgcgcggctt caggatgcga gccagatccc tcacgaacgc
     3361 ccgatcgtct ggaatgtgct ccaggaaatc cacgatgacg atctgatcga aggcgcggtc
     3421 cggaaacgga gtagcgcctc cgtccagctg atatacgtcg tcatggacca gctcacgaat
     3481 cgaagcgacg gctccggcat cgagatcggc gctgaaccat cgccctcctc tctgccggag
     3541 gaggtagctg atcaccccgt tgtccgctcc gatgtccagg ctggcccggc cggcgggctc
     3601 ctcgaggagt tccaacaccc tccggtattt ggcttgtttc aggacggagc ggttaaagag
     3661 cgcgaccgcc cactcggcag tggcctggct catcagccta cctgcttatg gcgcgggaac
     3721 cggaatcgag acgggaagcc ggagatgccg gaacgtcaca tagaatgcgg tgagggctcg
     3781 cagtaaccag cccagcgcga cgccatacat gacccccgcc aatccccacc gggcgccgaa
     3841 cgctgcggcg gggatcgcca gggcaatcga cacccatcca agcacgttga ccaacgacag
     3901 ctccgagggt gtcgccaggg cggtaaccgt cgatttgctg aatgagttgg caatcttggt
     3961 aatgccgctg atgatcgcag ccagcaggag cgatccggtc agatgatact ttccatccag
     4021 gaaccagcgc tcgaccaatg gggtgactac ccaaacaaag ccggagccgg ccacgacgat
     4081 gactccgacc agcttggctt cctgagcgat gaggtggcgc cgttcggaaa gatcacgagc
     4141 ggctcggagc cgcggcatca gggaatatcc cacacccatt tgcatgaccc gaaagaacga
     4201 cccggcaatg gcagccagga caccgtaaat agccagatcc cgtagcggga gcacgtgggg
     4261 gatgatcaac cgatccaatt gaatcaacat caggccggcg gcattgagac cagccacagc
     4321 cagcgactct gaccagggaa accaggtctc ccgggcgttc ttggctgcgc gctcccgaaa
     4381 cagcagggtc cacccataga tcccggcaac cacaaacccc accgcgcaaa tcagcagcgg
     4441 caaccacgcc cgcttcccac cggtgagaag tacgatgaga gcggccacca gcatgaccac
     4501 gttcggactc tgaatcaggg cgagcgaaag accgaaacgc cgctcactct gaaactgggc
     4561 accggcgact gccatcgctc cgccggcgac ggtcgagacg aacaatacc
//
LOCUS       DASRPQ010001017         1209 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_121942, whole genome shotgun sequence.
ACCESSION   DASRPQ010001017 DASRPQ010000000
VERSION     DASRPQ010001017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121942"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..815
                     /locus_tag="VFD73_11535"
     CDS             <1..815
                     /locus_tag="VFD73_11535"
                     /inference="COORDINATES: protein motif:HMM:NF033590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZI74625.1"
                     /translation="DIYELLATAAEQAPDQPRVEYVIRSQFDRTLVGEGSLRALVHQQ
                     PVLGEVDFQVAATPTRRTRRVRQTVRVAQVCLKAPTGKESWAPCVSTTAILLTESQPP
                     AGEAPVEWLLLSSQPVTTLAQAVETVKWYLCRWEVEVYFRINKSGCRVERLQLEVSEH
                     LEPALALYMIIAWRIQSLVMLGRSDPDLPCDVVFDDLEWRTAFMIRHHRPPTTPPRLA
                     DMITIIASFGGYLARKSDPPPGPKAIRIGLQRLRDFVIARTAIDEINRTCVE"
BASE COUNT          232 a          399 c          370 g          208 t
ORIGIN      
        1 ccgacatcta tgaactgctg gccacagcgg cggagcaagc gccggatcag ccgcgcgtcg
       61 agtacgtgat ccgctctcag ttcgaccgga ccctggtcgg cgagggctcg ttgcgagcct
      121 tggtccacca gcagccggtg ctgggggagg tcgacttcca ggtggccgcg acaccgaccc
      181 ggcggacgcg tcgggttcgc caaacggtgc gggtcgcaca ggtctgtctc aaggcgccca
      241 caggcaagga aagctgggcg ccctgcgtga gcacgacagc catcttgctc acagaaagcc
      301 agccgcccgc gggagaggcg ccagtggaat ggctgttgct gagttcccag ccagtgacca
      361 cgctcgcgca agccgtcgag acggtgaaat ggtacctgtg ccgctgggaa gtcgaagttt
      421 atttccggat caacaagagc ggctgccggg tcgaacggct tcagcttgaa gtcagcgagc
      481 acctggagcc cgccctggcc ttgtacatga tcattgcctg gcggatccag agcctcgtca
      541 tgctgggacg atccgatccg gatctgccct gcgatgtggt attcgatgac ctggagtggc
      601 gcaccgcttt catgatccgg caccaccgac ccccaacgac cccgccgcgc ttggcggaca
      661 tgatcaccat catcgcttcc ttcggcggct atctggcgcg caagtccgat ccgcctcccg
      721 gcccgaaggc catccggatc ggactacagc gcttacggga ttttgtcatc gcgcgaacag
      781 ccatcgacga aatcaaccga acttgtgtgg aatgatgtgg ctttcgccgg ctcaaccgcg
      841 acaacggttc atcctcccga tatgacagac acgctccggc ccgggcaacc gtcaccaccc
      901 agtcgagcgg atagttggca atattgtaga caccgcaaac acgacgtcgc tcggcacctg
      961 gagccggttg agcgccgtgc cggtgcgctc gttgaaccgc cgcccgcaat cccggcactg
     1021 gaagcgccgg aaaccatgaa ccgttcgccc ctcccgctcg ctggtcgacg atgagtggca
     1081 atgcgggcag tccatggtgg ctctcttgat ctctccaaat gcggcatcaa gaacctatcc
     1141 gctgggggcg catccggcaa gctgccccga gatctgacag aaccaggaag gcagcgccgc
     1201 ctatgccgc
//
LOCUS       DASRPQ010001018         3203 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4194096, whole genome shotgun sequence.
ACCESSION   DASRPQ010001018 DASRPQ010000000
VERSION     DASRPQ010001018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3203
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4194096"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..884
                     /locus_tag="VFD73_11540"
     CDS             <1..884
                     /locus_tag="VFD73_11540"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HZI74626.1"
                     /translation="GYTEREQATLSELRLALEPVLQATVPEPLGSFGTGAYRGFRETP
                     VAGRTIASSTGRWQASRARQISDLRLASDWIARFHSATLRQRIRWDEDQIDCWLTRRF
                     DRYSQTFGTGPEENDLFAAATEQARSRIGERIPIVWSHNDYGPWHVYRSGAELSVIDW
                     EFGGQDLGERWGLPGCDLVYFVTHWIYLARGLEDAGGRLGAFKELFLGKPGSDSRCDA
                     ARDCLTEYLRRLQTPPGFLGVLVVYTWVERAIDQWSRQASLDGVRDNPRVSNPFIGYV
                     EALAEGVDSLFGTVRGE"
     gene            933..1892
                     /locus_tag="VFD73_11545"
     CDS             933..1892
                     /locus_tag="VFD73_11545"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI74627.1"
                     /translation="MMPSGQSALPPTSLIICTRNRPGMLAETVRSVLAGREVPTELIV
                     VDQSDVPTDDLASAGGSSGCEVRYTWSPVPGLSHANNLGVRLARHEVLVFTHDDVHAD
                     EFWFGTLVRSLLVAGPRSVVTGRVPPGPPEVPGGFQQTLRTSQTATVWQGRTRERPLL
                     VLNMALLRGTYVEVGGFDERLGPGTPFPGAEDVDLGFRLLEAGYRIIYVPDAVIYHRA
                     WRKPSSYLSIRWAYGLALGGFYAKHLSVRDRWMAHSMLAVLRSRMSRGVRALAGRPRA
                     ALGDFLSVAGIVAGTGLWWLTQAGRPRAPASSDLRPARAPRED"
     gene            1897..2790
                     /locus_tag="VFD73_11550"
     CDS             1897..2790
                     /locus_tag="VFD73_11550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74628.1"
                     /translation="MPFSVHRIASSLAGRLLDALAPRLSMAERTSPCTKIGLVHLSDH
                     YRTLISSGAPLPRIQDVGFRVFSQFDEDGILLFLLAVVGRGPGIFVDIGAGDGVTASN
                     CANLALNLGFHGLMVDANAEKVRRAERFYAGHPDTSQYPPRCCCAMVTRGNINSLILD
                     GGVKGEIDVLSIDIDGNDYWVWKTIECVQPRIVVAEVHVEFGKRSIVVPYDDNFTWQS
                     GGSPYYAGASAGAMTKLAADLGYRLVGANRYGFNAFYLRNDLAIETIPTMQVDELLSH
                     PRTVARELLFEDIKDLPFVQV"
     gene            complement(2762..>3203)
                     /locus_tag="VFD73_11555"
     CDS             complement(2762..>3203)
                     /locus_tag="VFD73_11555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74629.1"
                     /translation="SRNIPEILDRWVRYAPAQAQSMIDRGQVFTASGMIRTMWWSFHR
                     QFVRGQGLRDGVPGMIRGVILIGFHFMVWACFWQLSGAQRTARDDRLLRRLSLLVESI
                     GRFGNLLLAPLDLLRRIRGPRGPTTTIRDARAQSTVTPGQRANP"
BASE COUNT          588 a          974 c         1015 g          626 t
ORIGIN      
        1 cgggctacac cgagcgagag caggctacgt tgtctgagtt gcgcctggcg ctagaaccag
       61 ttctccaggc gaccgtgccg gagccactgg gctcattcgg gaccggtgca taccgagggt
      121 ttcgcgagac ccctgttgcc ggtcggacga ttgcgtcctc caccggtcgg tggcaagcgt
      181 cacgcgctcg ccagatcagt gatcttcgcc tggcgtccga ctggatcgcc cgctttcact
      241 cggccaccct ccggcagaga attcgttggg acgaggatca aatcgactgc tggctcacac
      301 gacggttcga ccgctacagc cagactttcg gcaccggacc ggaagaaaac gacctgttcg
      361 ccgccgccac ggaacaggcc cgctcccgga tcggcgagcg aattcccatc gtctggagcc
      421 ataatgatta tggcccctgg cacgtctacc gatcgggagc cgagttgtcg gtcatcgact
      481 gggaatttgg gggacaagat ctcggcgagc gctggggtct tcccggttgt gatctcgtgt
      541 atttcgtgac ccattggatc tatctcgccc ggggcctcga agacgcaggg ggacggctgg
      601 gcgcgtttaa ggagctattc ctgggaaagc caggctccga cagcaggtgc gatgccgcgc
      661 gcgactgtct gacggagtac ctccgacgct tgcaaactcc gcccggcttc ctgggggttc
      721 tggtggtcta cacctgggtc gaacgcgcca tcgaccagtg gtctcgccag gcttcactgg
      781 acggagttcg agacaacccc cgtgtgagta acccgttcat cggctacgtc gaggcgttgg
      841 cggaaggtgt cgatagcctg ttcggtacgg taagaggcga gtgaggccgg gttggaattc
      901 ctcgcggagg cccgattgcg ttgaggaaaa ggatgatgcc ctcaggccag agcgcgctac
      961 ctccgacctc gctgatcatc tgcacccgga accggcccgg tatgctggct gaaacggtgc
     1021 gctcggtgct cgcaggacga gaggtgccca ccgagctcat cgtggtagat caaagcgacg
     1081 ttccgacgga tgatctagcc tcggcagggg gcagctccgg ctgcgaggtt cgctatacct
     1141 ggtctcccgt ccctggcctg agccacgcca acaaccttgg tgtccgtctg gcccgtcacg
     1201 aggtgctggt gtttacgcac gatgatgttc atgcagacga gttctggttc ggcaccctgg
     1261 tgcggagcct tctcgttgct ggcccacgaa gcgtcgtcac aggcagggtg cctccaggtc
     1321 ccccggaggt ccccggagga tttcagcaga ctctcagaac cagtcaaact gctacagtgt
     1381 ggcaaggccg aacccgcgaa cgtccgctcc tggtcctgaa catggcgctg ctccgaggca
     1441 cctacgtcga ggtgggggga ttcgacgagc gcctcggtcc tggaacgcct ttccccgggg
     1501 ctgaggacgt ggatctgggc ttccgtttgc tcgaggctgg gtatcgcatc atctacgtcc
     1561 cagacgccgt gatctaccac agagcctgga gaaaaccatc cagctacctg tcgatccggt
     1621 gggcatacgg tctagccctg ggagggtttt acgccaagca tctgtcggtc cgcgaccgct
     1681 ggatggccca cagcatgctt gctgtgctcc gctcgcgaat gtcgcgtgga gtccgagcac
     1741 tggcgggtcg cccgcgcgcg gcgttgggcg atttcctatc ggttgcaggc attgttgccg
     1801 gcaccggttt gtggtggttg acgcaggcag gaaggccacg cgcgccggcg agcagcgatc
     1861 tgagacctgc ccgcgcacca cgggaggact aaggacgtgc ccttctcagt acaccgcata
     1921 gcgtcgtcgc tggctggaag gctgctggat gctctggccc ctcggctgtc gatggcggag
     1981 cgaacctctc cctgcacgaa aatcggtctg gtccatctat cggaccacta tcgcacgctg
     2041 atcagcagcg gcgcgccgct gccccgaatc caggatgtcg gctttcgggt attctcgcag
     2101 ttcgacgaag acggcattct gctctttctc ctcgccgtgg ttggcagggg accgggcatc
     2161 ttcgttgata tcggagcggg agacggcgtc actgcgagta actgcgccaa tctcgccttg
     2221 aatctcggat ttcatgggtt gatggtcgat gcgaacgcgg agaaggtgcg ccgggcggag
     2281 cggttctatg ccggccaccc tgacacctcc cagtacccac ctcgctgctg ctgcgccatg
     2341 gttacccggg ggaacatcaa tagcctaatc ctcgatggcg gcgttaaggg agagattgat
     2401 gtgctctcca tcgacatcga cgggaacgac tactgggtgt ggaagacaat cgagtgcgtt
     2461 caaccacgca tcgtggtggc cgaggtgcac gtggagttcg gcaaacggag tattgtggtg
     2521 ccctacgacg acaactttac gtggcaatcc ggcggcagcc cgtactacgc cggtgcatcg
     2581 gccggcgcca tgacgaagct ggcggcagat ctgggatatc ggctggtggg agccaaccgc
     2641 tatgggttca acgcattcta cctgaggaat gacctagcga tagaaactat tcccactatg
     2701 caggtggacg agctgctgag ccatccgcgc acggtggcgc gggagctgct cttcgaggac
     2761 atcaaggatt tgccctttgt ccaggtgtga cagttgattg tgcccgtgca tcccgaattg
     2821 ttgtagtcgg gccgcggggc cctcggattc gtcggagaag atccagcggg gccaggagca
     2881 gatttccaaa tcggccgatt gactcgacca gcagactcag ccgccgcagc agccgatcgt
     2941 cgcgcgccgt ccgctgagct ccggaaagct gccaaaaaca cgcccagacc atgaagtgaa
     3001 aaccgatgag aatgaccccg cgaatcatgc cgggaacacc gtccctcagg ccttgccctc
     3061 gaacgaactg gcgatggaag ctccaccaca tcgttcggat catcccgctc gccgtaaaga
     3121 cctgtccgcg gtcaatcatt gactgagcct gcgcaggcgc ataccgaacc cagcggtcca
     3181 gaatctcagg gatattccgg ctc
//
LOCUS       DASRPQ010001019         1132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3886018, whole genome shotgun sequence.
ACCESSION   DASRPQ010001019 DASRPQ010000000
VERSION     DASRPQ010001019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3886018"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(95..379)
                     /locus_tag="VFD73_11560"
     CDS             complement(95..379)
                     /locus_tag="VFD73_11560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74630.1"
                     /translation="MGDDEAIFKHYGSDTSRVLAMSGDWRAAEQRDGAEDWMIAFFLL
                     LVIVAIVLGIVGVAAKGLLYLLFIGIAVFLAALIFAALRMRRRPGRRPPR"
     gene            complement(403..630)
                     /locus_tag="VFD73_11565"
     CDS             complement(403..630)
                     /locus_tag="VFD73_11565"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HZI74631.1"
                     /translation="MREWRGHDVVDAQEHKIGELKAVYVDTGTDQPSFGTVKVGLPTR
                     HRLVFVPFNQATVGPAYVNVSYDKKQVQKPP"
     gene            complement(748..921)
                     /locus_tag="VFD73_11570"
     CDS             complement(748..921)
                     /locus_tag="VFD73_11570"
                     /inference="COORDINATES: protein motif:HMM:NF017353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HZI74632.1"
                     /translation="MGAENKAANKVTEIKGKIKKKAGQATDDVGLEAEGRAEESKGDL
                     KQAGEKIKDAFKK"
BASE COUNT          199 a          399 c          317 g          217 t
ORIGIN      
        1 ttcggctgct gcctcgccag gctgcggccc gaccctcacg gctggcctgg tcgaaccccg
       61 cccagaaaag tcacgcatca agtgtgacgg ggaactagcg gggcgggcgc ctcccgggcc
      121 gccgccgcat gcgcagggcg gcgaagatga gagcggcgag gaacacggca ataccgataa
      181 acagcagata cagcaggcct ttcgcggcga cgcctacaat acccagcacg atcgccacga
      241 tcaccagcag taggaagaaa gcaatcatcc aatcctccgc tccgtcccgc tgctcagcgg
      301 cgcgccagtc gccgctcatc gccagcaccc ggctggtatc cgagccgtag tgcttaaaga
      361 tcgcctcgtc gtcgcccatt ggcaactcgc cgtcggtccc gatcaagggg gcttctggac
      421 ctgcttcttg tcgtaggaga cattcacgta ggccggaccc accgtcgcct ggttaaaagg
      481 tacgaacacg agccggtgcc gggtcggcaa tccgaccttg accgtgccga acgacggctg
      541 gtctgtgccc gtgtcgacgt agacggcctt cagctcaccg atcttgtgct cctgggcgtc
      601 aaccacatcg tggccacgcc actcccggat gtggcagcct cgaacatgct ggcctactcc
      661 cccgctgcac cactcctcac ggaggaatgg ctcgtgtgag ttcggcctcc cgcggcgatc
      721 agtgacgcgc tactcgggat gaactaatca tttcttgaaa gcgtccttga tcttctcgcc
      781 agcctgcttg aggtcgccct tcgactcctc agcccggcct tcagcctcca ggccgacgtc
      841 gtcggttgcc tggcctgcct tcttcttgat cttgcccttg atctcggtca ccttgttggc
      901 tgccttgttc tcagcgccca tgaggaaatc cttccgattt ggtaccgggc ctagctgccc
      961 gtcgaggtca gcaccaaaca tccgcgctgg ccagaacgcc acccaggcct gcttcgccac
     1021 accaacgcat gatcgccgcc agcgattgga cttcccctcg tagcactgtc cacgctttca
     1081 ggggaacccc cggatgctgc tgtggtcagc cttggtggtc agccacccgc ag
//
LOCUS       DASRPQ010001020         1695 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1691893, whole genome shotgun sequence.
ACCESSION   DASRPQ010001020 DASRPQ010000000
VERSION     DASRPQ010001020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1691893"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..193)
                     /locus_tag="VFD73_11575"
     CDS             complement(<1..193)
                     /locus_tag="VFD73_11575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74633.1"
                     /translation="MSKGTSREVTRSARITPRALSRVFGRAVSGWWNDNVPRMGASLA
                     YYTLFALAPVLVVAIAIGGL"
     gene            complement(190..>1695)
                     /locus_tag="VFD73_11580"
     CDS             complement(190..>1695)
                     /locus_tag="VFD73_11580"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HZI74634.1"
                     /translation="NVVSRNPGYASRRDISIVLGCALVGWLLAYVVVFMMCRRSALRA
                     SWLVFLLVLVFYGSVALVAWGRTLGGMAGAAGLALLTAVAAIAVSRWLIHRTARLEQV
                     SRLLGLSGLLVTIWLSGEIVRDQARERSVVHHSALAKRLAQPIGVVQGKRSPAALPDI
                     YLLVLDEYANADVLQEQFSFDNHVFEDSLRGLGFTIPRAVHSNYAHTTLSLPSLLNFS
                     HLTELTGELGRTATDPTLPNYLLHHNRTVAFLKRQGYAFLFYPSQWWPATRHNPDADF
                     EFEAWQGFSPARELTRTHFRRTITRMTLLGQIFPEPPYDSDHIKRTLEALKAVPARAE
                     PTFAFVHVLNPHYPYVFQADCRPVRLHARQRKRLAYVEQLRCLNQLVLSTVTYLLQHS
                     PTAPLILLQGDHGTSTLNFSWAPSAAAVSPAQARERFGAFGAYYLPAGGNRLVADSVT
                     LVNVLPKVLDYYLGAAIEPSPDDLYMSTEPQPYDFVKVDPHRLVPTLAHEP"
BASE COUNT          356 a          506 c          544 g          289 t
ORIGIN      
        1 ccaatcctcc aatggcaatc gcgactacca gcaccggggc caaggcgaac agggtgtagt
       61 aagccagcga ggctcccatc cggggaacgt tgtcattcca ccaacctgac accgcccgac
      121 cgaacacccg gctcaatgcg cgaggcgtga tccgcgcaga gcgagtcact tctctactgg
      181 tgcccttgct catggttcgt gagcgagggt cggcaccaat cgatgcgggt ctaccttcac
      241 aaagtcgtac ggctgtggct cggtcgacat gtagaggtcg tcgggagacg gttcgatcgc
      301 cgctcccagg tagtagtcga ggaccttcgg aaggacgttt accagagtga cagagtcggc
      361 cacgagacga tttcctccgg cgggcagata gtacgcaccg aatgccccga atcgttcccg
      421 ggcctgcgcg ggggatacgg ccgctgcact gggggcccac gagaagttga gggtactggt
      481 cccgtggtca ccttgcaaca ggatgagcgg tgcggtgggc gagtgttgaa gcaggtaggt
      541 gacagtgctc aggaccagtt ggttcaaaca ccgtagctgt tcgacgtaag ccagccgttt
      601 ccgctgcctc gcatggaggc gaactggccg gcagtccgcc tgaaagacat aggggtaatg
      661 tgggttgagc acatggacaa aggcgaaggt tggctcagcc cgcgcaggta ccgccttcaa
      721 tgcctcgagt gtgcgtttga tgtggtcgct atcgtatggt ggttcaggaa agatctgccc
      781 cagcagggtc atccgcgtga tcgtccggcg gaagtgcgtg cgcgtgagct cgcgtgccgg
      841 gctgaacccc tgccacgcct cgaattcgaa atccgcatcg gggttgtgcc gagtcgccgg
      901 ccaccattgg gaggggtaga acaaaaaggc gtacccctgc cgcttcagaa aggcgacggt
      961 ccggttgtgg tgcaggagat agttcgggag tgtggggtcg gttgcagtac ggccaagctc
     1021 gccggtcagt tcagtgaggt gactgaaatt caggagggac ggcagcgaca gggtggtgtg
     1081 cgcgtagtta ctgtgaaccg ctctcggaat ggtaaagccc agccctcgca gactgtcttc
     1141 gaagacgtgg ttgtcgaagg agaactgctc ctgcaggacg tcggcgttgg catactcatc
     1201 gaggaccaac aggtaaatgt ccggcaacgc ggcgggagaa cgctttccct gcaccacccc
     1261 gatcggctgc gccagccgct ttgccagtgc gctgtgatga acgacgcttc gctcgcgggc
     1321 ctgatctcgg acgatttcgc ccgagagcca gatggtcacg agcaagccgc tcaaacccaa
     1381 tagccggctg acctgctcca ggcgtgccgt tcggtgaatc aaccaccggg agaccgcgat
     1441 agccgcgacc gccgtaagca gcgctaaacc cgccgcgccc gccataccgc cgagagtgcg
     1501 gccccaagcc accagggcta ccgagccgta aaacaccagc accagcagga acaccagcca
     1561 ggaagcccgg agcgctgagc gccggcacat catgaacacc accacgtacg caagcagcca
     1621 gcccacaaga gcacatccga gcacgatgct gatgtcgcgc cgagaagcat atcccgggtt
     1681 gcgactcacc acgtt
//
LOCUS       DASRPQ010001021         1722 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_122509, whole genome shotgun sequence.
ACCESSION   DASRPQ010001021 DASRPQ010000000
VERSION     DASRPQ010001021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122509"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..944
                     /locus_tag="VFD73_11585"
     CDS             171..944
                     /locus_tag="VFD73_11585"
                     /inference="COORDINATES: protein motif:HMM:NF018184.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HZI74635.1"
                     /translation="MLRYYDATRLLRPARADPSQRLLVLRGRPARAAQPHHRAEKPRL
                     HPGPGARHADEKVSAEQLRGMLRLRQAELESAIAADASRLAQVEARLRIIELEGAMPV
                     DDIQVKRIPAVRVAELTATAARLEPASIDPVIQPLYRELGERLGQAGLTPAGPAISYY
                     EDVPDGDGVIVHASLPVNAGPGSAHGFEITDLPEITQAATIMHRGPIENVVATVQTLA
                     RWIDENGYRSSGYARELTLEYPDDPDKRVTEMQVPITPA"
BASE COUNT          336 a          585 c          532 g          269 t
ORIGIN      
        1 aagtgataac ggcgcgtgac tggccttctc acgacgccgc agacagatcg ccgaatattc
       61 gcttctcccc tgcccagaac gctgcttacg acgcgcgcgc agattcgcca gttagggcgc
      121 gggacagcgc tagatcggac atgtgcacgt cctgtgactg agagtgccgg atgctacgct
      181 attacgacgc aacgcggctg ctccgcccgg cccgggccga ccccagccag cggctgctgg
      241 ttctacgagg ccgtccagct cgcgcggctc aaccgcatca tcgcgctgaa aaacctcggc
      301 ttcaccctgg accaggtgca cgccatgcag acgagaaggt cagcgccgag cagttgcgcg
      361 gcatgctgcg gctgcgccag gccgagctgg aatcggcgat cgctgccgat gcgtcccggc
      421 tggcgcaggt cgaggcgagg ctccggatca tcgagttgga gggcgccatg ccagtcgacg
      481 acatccaggt caagcggatc ccggcagtcc gcgtcgcaga actcaccgca accgccgcgc
      541 gccttgagcc cgcgtccatt gatccggtca tccagccgct ataccgcgag ttgggcgaac
      601 ggctcggcca ggcaggactg accccggcag gcccagccat ctcttactac gaagacgttc
      661 cagacggcga cggggtgatc gtccacgcct ccctgccggt caacgcgggc cccggcagcg
      721 cccacggctt cgagatcacc gacctgcccg agatcacgca agcggccacg atcatgcacc
      781 gcgggcccat agagaacgtc gtggcaacgg tccagaccct ggcccggtgg atcgacgaga
      841 acggctaccg cagcagcgga tacgcccgcg agctgaccct cgaataccct gacgacccag
      901 acaagcgggt caccgaaatg caagtaccca taacgcctgc atgaccacgc ctgccgcgtc
      961 ccggcgcgca aaatccgctc ccgcacgcgt cgacgacaca gcctgaaccc gacgccgggg
     1021 ccttaccggc ctcaacgtcg tagggtccac gcgctaacca tgcgggcgcg ctgcccgttg
     1081 acccccgtac cggcatcagc gttgactagc acatatccgg gaagcccgta cggcacccgc
     1141 accctagaaa tcgtcaagca tcacctgaag ccgatccgtc aacgatcagt tggacctagg
     1201 caggtgaggc taggcaggtg aggctaggca ggtgaggcta ggcaggtaag gcaggcagga
     1261 tcacactccg gggcagctcc tgcccgttgc gcagcgaagc gcatcccgaa gcgcatccct
     1321 gtcctgtccc tcttgatgct ttatacggca aggatcaagt gaggctagac atcccgaagc
     1381 gcatccggaa gcgcatcacc ggccgcaccc ggtggccaga aggccatgca agcatccggg
     1441 ccagggttcg gacacgggcc agggtcgcgg gtcgcggtgc tgtacagggt gggcatgcgc
     1501 gaagcacacg ttggggaggt tcagatcatc tagttccgca caacgcaggt cgactcgttc
     1561 tagttcgagg gcgctgccac cgcgatgaac cgtatcttcc cggctcgcga tgcttagtca
     1621 ctcagctcgt cactcacagg ccaactggca ggtctgtcac caggttgttt tgcctggtgg
     1681 gcgcaacagg gttcgaacct gtggcttctc gcttgtaagg cg
//
LOCUS       DASRPQ010001022         1972 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1692118, whole genome shotgun sequence.
ACCESSION   DASRPQ010001022 DASRPQ010000000
VERSION     DASRPQ010001022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1972
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1692118"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..777
                     /locus_tag="VFD73_11590"
     CDS             <1..777
                     /locus_tag="VFD73_11590"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HZI74636.1"
                     /translation="ATEGLLSDLGEYVCRHWNEPDEGIWEPRSGRVDHTHSRVLCWAA
                     LDRLVQLHEQGHLNRAPAEMFRENREAIRRQVEERAWNAELGSYVSALGGDDVDANLL
                     LLAWYGFEDPQSARMCGTYRRIRERLGASDGLLYRYHRDTPVLPGDDHGKPSSPGEGA
                     FGISSFWGVEYLALGGGTAEEACEEFERLCQYANDVGLFAEEIDPETGAALGNFPQAF
                     THVGLINAALSVANRLQGAAPMPRHVPAREPDSESKEVRV"
     gene            774..1250
                     /locus_tag="VFD73_11595"
     CDS             774..1250
                     /locus_tag="VFD73_11595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74637.1"
                     /translation="MNWGGWLLWSFVATLALTSVMSGSQGLRLTRMNLPYMLGSLFTP
                     NRDRAKVIGFGVHLVNGWIFSLVYVAAFQSLGRANWWIGSAIGLFQAIFVLTVLMSVL
                     PSFHPRMATEEKGPTVTRQLEPPGFLALNYGYQTPVSVVIAHLIYGAVLGAFYTVR"
     gene            complement(1260..>1972)
                     /locus_tag="VFD73_11600"
     CDS             complement(1260..>1972)
                     /locus_tag="VFD73_11600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74638.1"
                     /translation="SCATADRAISIAPDIAAARWTKILCLVLRDSVPQAKQSLHDAVN
                     AVDFVQMSRLAAGSAAVASFAVSPTFLFVDDSMYQAKLEQLTPSEFTDTMGLYSLKAE
                     VYRVKSQAGMERIYLDSARTILESRVQEHPAEANFHSQLGLIYARLGRKSEALREGQA
                     AVKLLPVSREAYRGANIQAALAMIYATLGMKAEAIEQLQYLLSIPSEVSPGLLRNDSR
                     WASLRGDPRFEKLVSGER"
BASE COUNT          341 a          619 c          635 g          377 t
ORIGIN      
        1 gcgaccgagg gactgctctc cgacctgggc gaatacgtct gtcgtcattg gaacgagcct
       61 gacgaaggaa tctgggagcc acgctcggga cgcgtcgacc acacccactc acgcgtgctg
      121 tgttgggccg cgctcgaccg cctggtgcag ctccacgagc agggtcacct gaaccgcgcg
      181 ccggccgaga tgttccggga gaatcgcgag gcgatccgcc gccaggtcga ggagcgggcc
      241 tggaacgcgg agctcggcag ctatgtctcg gcgctcggcg gggacgacgt cgatgccaac
      301 ctcctgctgc tggcgtggta cgggttcgag gacccgcagt ccgcgcgcat gtgcggcacc
      361 taccggcgga tccgcgagcg gctcggtgca agcgacggct tgctgtaccg ctatcaccga
      421 gacactccag tgcttcccgg cgacgatcac ggcaagcctt cttctccggg agaaggggcg
      481 ttcggcatct ccagtttctg gggcgtggaa tacctggcgc tgggcggcgg gacggcagag
      541 gaggcgtgcg aggaattcga gcgcctctgt cagtacgcca acgatgtcgg acttttcgcc
      601 gaggagatcg atcccgagac cggcgcggcg ctgggcaact ttccgcaggc gttcacccat
      661 gtgggactga tcaacgccgc gctgtcggtg gccaaccggc tgcagggcgc ggcgccgatg
      721 ccgcggcacg tgcccgcacg cgagcccgat tcggaatcga aggaagtccg ggtatgaact
      781 ggggaggctg gctcttgtgg agcttcgtgg ccaccctggc gttgacctcg gtgatgtcgg
      841 gaagccaagg cctccgcctc acccggatga accttcccta tatgctgggc tcgttgttca
      901 cccccaaccg cgatcgcgcg aaggtgatcg gattcggcgt gcacctcgtg aacggctgga
      961 tcttctcgct ggtatacgtc gccgcgtttc agtcgctggg gcgggcaaac tggtggatcg
     1021 gctcggcgat cgggctgttt caggcgatct tcgtgctcac ggttctgatg agcgtgttgc
     1081 cgagcttcca tccccgaatg gcaaccgagg agaagggacc gacagtgact cggcagctcg
     1141 agccgccggg ctttctggcg ctgaactacg gctatcaaac gccggtatca gttgttattg
     1201 ctcacctgat ctatggggcg gttctcggag ccttctatac tgtgaggtga cccgctcgct
     1261 cagcgctcac cgctcaccag cttttcgaat ctcggatctc cccgcaacga cgcccagcgc
     1321 gaatcgtttc ggaggaggcc cgggctgacc tcagacggga tcgagagcag atactgcagc
     1381 tgttcgatcg cctccgcttt catcccgagt gtcgcgtaga tcatagccag cgctgcctgg
     1441 atattggcac cacggtacgc ctcacggctc actggcaaga gcttcaccgc ggcctgacct
     1501 tcccgcaacg cttcggattt ccggcccaga cgcgcgtaga tcagaccaag ctgagagtgg
     1561 aagttggcct ccgcggggtg ctcctgaacc cgggattcca ggatggtccg cgcggaatcc
     1621 aggtagatcc gttccatccc tgcctgactc ttcacgcggt acacttcagc cttgagactg
     1681 taaagtccca tggtatcggt gaactccgag ggcgtcagct gttccagctt ggcttgatac
     1741 atcgagtcgt cgacaaacag gaacgttggc gacaccgcaa agctggcgac ggcggcgctc
     1801 ccagcggcca ggcgactcat ctgcacgaag tctaccgcat tcaccgcgtc gtgaaggctt
     1861 tgctttgcct gcggaacgct gtccctgagt accagacaca ggatcttcgt ccatcgagcg
     1921 gccgcaatgt ctggagcgat gctgatcgct cgatcggcgg tcgcgcatga ca
//
LOCUS       DASRPQ010001023         2194 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3886873, whole genome shotgun sequence.
ACCESSION   DASRPQ010001023 DASRPQ010000000
VERSION     DASRPQ010001023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3886873"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..700)
                     /locus_tag="VFD73_11605"
     CDS             complement(<1..700)
                     /locus_tag="VFD73_11605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74639.1"
                     /translation="MLTNPAVLLGLQVPPRRSPADTLYPIDQLRLSLAETRPYNAPGG
                     LPRLVLAVSTVEEFGCLGYRVSHDLMLVRDTLRLQLHGVLPPQGDLCLTAVGPATLSR
                     ELDLANGKYLLLVSYRKARDRLMLDISDSMTMVTGLDSSLVEADERPRWRYRRNSFVL
                     QCNDQGAGFCDDVSQWLVKQSGISRDSFPPGGINPFRPQDYSDHGRVFYRYDQIGSFL
                     RLRSCFSSIQAQIVD"
     gene            complement(769..>2194)
                     /locus_tag="VFD73_11610"
     CDS             complement(769..>2194)
                     /locus_tag="VFD73_11610"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HZI74640.1"
                     /translation="GHLYAEANDKIVRYQLGSQGMAPTGPAEIVVRGLPLTGDHPMHP
                     FAIDSAGGLYIDLGSATNACQLKNRIAGSPGRRPCTELKTRGGIWRYDANRTGQRFSP
                     AERYATGIRNADGFAVDESGKILYATQHGRDQLAENWPRLYTPETGASQPAEELLQVE
                     RGGDYGWPECYFDTAQAKLVLAPEYGGNGGKEIGICASKRGPLAYYPAHWAPLALALT
                     SGTQFPSRYGGGIFIAFHGSWNRAPFPQGGYNVVFQPLSNGKPSGAYEIFADGFAGAV
                     KDPGRAEHRPAGVAFGPDGSLYIAEDVRGRIWRVSYRGTAAVASRSRAESTSRAVTSP
                     GGQSAKPVEPPEGINPNAGESPAGATPLPAPPAVPSGAPSVTQAMLALGDSVYHGQVG
                     GATCVGCHGSDAKGTPLGPDLTDQQWLWSDGSLRSIQQTIARGVPKPKQHTGVMPPMG
                     GANLNAAQLHAVAAYVYALSRSGS"
BASE COUNT          395 a          703 c          691 g          405 t
ORIGIN      
        1 cgtccacgat ttgcgcctga atcgagctga aacaggagcg cagccgcaag aaggaaccga
       61 tctggtcgta gcggtagaac actcttccgt gatcgctata gtcctgcggt ctgaatgggt
      121 tgattccgcc aggagggaag gagtcccggg atattcccga ctgcttcact aaccattggg
      181 acacatcgtc gcagaaccca gctccttggt cgttgcattg gaggacaaag ctgttgcggc
      241 gatatcgcca ccgtggtcgc tcgtctgcct cgaccaacga cgagtcaagc cctgtcacca
      301 tcgtcatgct gtctgagata tccagcatga gtcgatcgcg agctttgcgg taacttacca
      361 agaggaggta cttgccattg gcaagatcga gctcacgcga cagggtggct ggtcccactg
      421 ctgtgaggca caggtcgccc tgggggggca gcaccccatg gagctggagc cggagcgtgt
      481 cgcggaccag catcaagtcg tgagagaccc gatatcccag acaaccaaac tcttctacgg
      541 tggacactgc cagcaccagg cggggtagcc cacccggagc attgtaaggc cgggtctcgg
      601 ctagactgag ccgaagctga tcaatcggat acagcgtatc ggctggagat cggcgggggg
      661 gaacctggag gccaagtaag actgccgggt tggtcagcat tcccagcaga agcaagacaa
      721 tagcaattac agtgctgctc cggatcatga gagccctgta aacgctgatc agctcccgct
      781 ccggctcagc gcgtagacgt acgccgcaac cgcatggagc tgcgcggcat ttaagttcgc
      841 gccccccatc ggtggcatca cgccggtgtg ctgcttcggt ttcggcaccc cacgcgcaat
      901 ggtctgctga atggaacgaa gactgccgtc gctccagagc cactgctgat cggtcagatc
      961 cggcccgagc ggcgtcccct tggcatcgga cccgtgacag cccacgcagg tcgcaccgcc
     1021 aacctgtccg tgatacacgc tgtcgcccag ggccagcatt gcctgggtca cactgggagc
     1081 gccggacgga accgctggcg gcgccggtag cggggttgct cccgccgggg actctcctgc
     1141 gttcgggttg attccctcgg gcggttccac cggtttggcc gattgtcctc ctggactggt
     1201 gaccgctcgc gatgtggact ccgcccgcga ccgactcgcg accgcggcgg tcccccgata
     1261 actcacccgc cagattcttc cccgcacatc ttcggcgata tagagcgagc cgtcgggtcc
     1321 aaatgcgaca ccggcgggac ggtgctccgc ccgtcccggg tctttgactg ccccggcaaa
     1381 cccatcggca aagatctcgt acgcgccgga aggcttcccg ttgctgagcg gctggaacac
     1441 gacgttgtat ccgccctggg gaaatggtgc tcgattccag gagccgtgga aggcgatgaa
     1501 gatgccgcca ccataacgcg acgggaactg agtgccgctg gtcagcgcca gcgccagcgg
     1561 tgcccagtgg gcgggatagt atgccagcgg tcctcgcttg ctggcacaga tcccgatctc
     1621 cttgccgccg ttcccgccat actccggcgc cagcaccagc tttgcctggg cagtgtcgaa
     1681 gtagcactcc ggccagccgt aatcgccgcc gcgctccacc tgaagcagct cttccgccgg
     1741 ctgcgacgcg ccggtctcgg gtgtgtacag ccgaggccag ttctcggcca gctggtccct
     1801 gccatgctga gtggcgtaca gaatctttcc gctctcgtcg accgcgaatc cgtcggcgtt
     1861 ccgaatcccg gtggcatacc gctcggcggg agagaaccgc tgcccggtac ggttggcatc
     1921 gtagcgccag attccgcctc gagttttcag ctcggtgcag gggcgacgac cgggcgaccc
     1981 cgcgatacga ttcttgagct ggcatgcgtt ggtggccgac cccaggtcga tgtacaaccc
     2041 gccggcggaa tcgatcgcaa acgggtgcat tgggtgatct ccggtgagcg ggagtccccg
     2101 cacgacgatc tctgcgggcc cggtcggggc catgccttgg gacccgagct gatagcgcac
     2161 gatcttgtcg tttgcttcgg cgtagaggtg tccc
//
LOCUS       DASRPQ010001024         1354 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1376477, whole genome shotgun sequence.
ACCESSION   DASRPQ010001024 DASRPQ010000000
VERSION     DASRPQ010001024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1354
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1376477"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1246)
                     /locus_tag="VFD73_11615"
     CDS             complement(<1..1246)
                     /locus_tag="VFD73_11615"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HZI74641.1"
                     /translation="MSLRVRLVLLIVVVVALAAAALSAVELETLIVSLTSDAIKYSNV
                     SAQQVSLLLRDHIEVFSESSPAPQSVEETKALWNQIVTDDAQLRRLLVQMMASSSSLL
                     EINVAGETGLILASSNDRAVNTPIERRENFETWNKNTWLRRTRDLLTRRPDWEFTVSL
                     GAGDPEKPIFTIQVVTSSFFLRKALTDQIQLMFLVSGGAIGLSLLLTILATTGALRPV
                     KRIEDSIDRIAQGRMGVEEPGGGGDPDDRTAKEFRAVQSKLNLLGQQYRGAREDAKEL
                     RHNVDQLLERMASQLDVATRLAAISRLTGGVAHEIKNPLNAIALRLELLRARLGEPDH
                     ELSGEIDILSQEVHRLDRVVKTFLDFSRPLEVHLQDIDLGVLAREVTEFVTPQARLAK
                     IDVDFSAPSEPAVLRGDSDLLKQ"
BASE COUNT          251 a          426 c          409 g          268 t
ORIGIN      
        1 cctgcttgag gagatccgaa tcgccgcgca gcacggcggg ctcggatggc gcagagaagt
       61 ccacatcgat cttggccagc cgggcctgag gcgtaacgaa ttccgtcacc tcacgcgcca
      121 gtactcccag atcgatatcc tgcagatgca cctccagtgg gcgcgagaaa tccaggaagg
      181 tcttcaccac gcggtccagg cggtggactt cctgagagag aatgtcgatc tcgccggaaa
      241 gttcatggtc cggctcgcct agccgcgccc ggagcaattc cagccgcagg gcgatggcgt
      301 tcagcggatt cttgatctcg tgcgccacgc ccccggtgag gcggctgatg gcggccagcc
      361 gggtagccac gtccagttgc gaggccatgc gctccagcaa ctggtctacg ttgtggcgca
      421 actccttggc atcctcgcgg gcgccgcgat attgctggcc gagcaggttc agcttgcttt
      481 ggacggctcg gaattccttg gctgtccgat catccgggtc tcctcctccg cccggctcct
      541 cgacgcccat ccggccctgg gcgatccggt cgatcgagtc ctcgatccgc ttcaccggac
      601 ggagcgctcc agtcgtcgcc agtatggtga ggagcaggga aagcccgatg gcgccgccgg
      661 acaccaggaa catcagttga atctggtcgg tcaacgcttt gcgcagaaag aaactggagg
      721 tcaccacctg gatggtaaag atcggcttct cgggatctcc cgctcccagg cttacggtga
      781 actcccagtc cggacgccgg gtcaacagat cccgcgtccg gcggagccat gtgttcttgt
      841 tccaagtttc gaagttttcg cgccgctcga tgggagtatt tacggcgcga tcgttggacg
      901 acgcgagaat caggccggtt tcacccgcca cattgatctc cagcagggaa ctggaggacg
      961 ccatcatctg taccaaaaga cggcgcaatt gtgcgtcgtc agtgacgatc tgattccaga
     1021 gggccttggt ttcctccacg ctctgcggag ccggactgct ctcggaaaag acttcgatgt
     1081 ggtcccgcag cagcagactc acctgctgag cgctgacatt gctgtatttg atcgcatcgg
     1141 aagtgagtga gacgatcaga gtctccagtt ccacggccga gagcgccgcc gccgccagcg
     1201 ccaccaccac cacaatcagc aggaccaggc ggacgcgcag cgacattaaa tcaagcgccc
     1261 gccccttgcg tgccgtactc cttcagcttg ttgaacagag tcttctggct gataccgagg
     1321 atgtccgccg cgcgggtctt gttgttcttg gtgt
//
LOCUS       DASRPQ010001025         1181 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_123322, whole genome shotgun sequence.
ACCESSION   DASRPQ010001025 DASRPQ010000000
VERSION     DASRPQ010001025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1181
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123322"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..633
                     /locus_tag="VFD73_11620"
     CDS             <1..633
                     /locus_tag="VFD73_11620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74642.1"
                     /translation="ALPGSRTIMLRADLEDLYRTLRHELAHLVLHQAVTVRVPLWFDE
                     GYAAWAAGEWDRLGTLELNLAVVRGAVPDLEGLDGALRGSATTADVSYALAVSAVLEL
                     ARRNPSHSLGPLLQRLSAGEDFEAGVRVTTGLTLSEFEREWQRSLRKRYSLGIWLMAG
                     GGWGILAFAAWLLQRRRKLADRARRAALDEGWEIPPEALAASELDPTKEP"
     gene            702..854
                     /locus_tag="VFD73_11625"
     CDS             702..854
                     /locus_tag="VFD73_11625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74643.1"
                     /translation="MLAPRNLIILGLALLVLVVGYLTLQAGHASIAAVILVLGYCVLF
                     PIGIAL"
     gene            924..998
                     /locus_tag="VFD73_11630"
     tRNA            924..998
                     /locus_tag="VFD73_11630"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:959..961,aa:Val,seq:tac)
BASE COUNT          188 a          367 c          382 g          244 t
ORIGIN      
        1 gcacttcccg gatcgcgaac catcatgctg cgtgccgatc tcgaggatct ctaccgcacg
       61 ctccggcacg agttagccca tctggtcctg caccaggcgg taacagttcg ggttcccctt
      121 tggtttgatg agggatacgc agcttgggct gcgggtgagt gggatcggct gggcacgctg
      181 gaactgaatc tggcggtggt acgcggcgcg gttcctgacc tggagggctt ggacggcgcg
      241 cttcgaggat ccgccaccac cgccgacgtg tcgtacgcgc tcgcagtctc ggccgtcctg
      301 gagctggctc gacgaaatcc ctcacattca ttgggtccac tgttacagcg cctcagcgcc
      361 ggggaagatt tcgaggccgg tgtgcgcgtt accactgggc ttaccctctc cgagttcgag
      421 cgggagtggc aacggagcct gcggaaacga tacagcctgg gaatctggct catggctggg
      481 ggtgggtggg gcattctagc gttcgcggcc tggctgcttc agcggcgccg caagctggcc
      541 gatcgtgctc gccgtgccgc cctggacgaa gggtgggaga tcccgccgga agctctagcc
      601 gcatctgaac ttgacccgac caaggaaccg tagtagcctc atcgtctatg tcgaatccac
      661 gcccgcccgc ccgttctggc caatcctcgc caagacattt cgtgctggcc ccacgaaatc
      721 ttatcatcct tggtctggca ctcctggtct tggtggttgg gtatctgacg ctccaggccg
      781 gtcacgccag catagcggcg gtcatcctgg tgctcggcta ttgcgtcttg tttcccatcg
      841 ggatcgcgct atagcgagct gttgttgatc acggcacggc ccctgcaatg aggtcagcga
      901 cgcgggggga cgggtcgctc tcagggcgaa tagctcagct ggttcagagc gcctgcctta
      961 cacgcaggat gtcgggggtt cgaatccctc ttcgcccatc gcggcctgga cccaggccgc
     1021 ttgttcacgt atttggaggc tattcaggat gacgctgact cgtctgatcg ctgccgcagc
     1081 ggtggtgggc ttcaccgttg ccggaccgat ggaggcgcag attccggtca aacggaacac
     1141 gccggaacag accaccgcgg cagcaccccg gctcctcgtg g
//
LOCUS       DASRPQ010001026         1266 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2011797, whole genome shotgun sequence.
ACCESSION   DASRPQ010001026 DASRPQ010000000
VERSION     DASRPQ010001026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2011797"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..500
                     /locus_tag="VFD73_11635"
     CDS             <1..500
                     /locus_tag="VFD73_11635"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI74644.1"
                     /translation="AERYDYEYVRNGTANLFMAFEPLGGWREVAVTDQRRREDWARFV
                     RDLVDGRYREADKLVLVMDQLNTHSPASLYEAFAPEEAKRLADRLEIHHTPKHGSWLN
                     MAEIELSALGRDLPDRVGDRATLERHVHAWQHRRNAAAIRADWQFTTADARIKLRKLY
                     PTMEG"
     gene            complement(572..850)
                     /locus_tag="VFD73_11640"
                     /pseudo
     CDS             complement(572..850)
                     /locus_tag="VFD73_11640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006954973.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            1054..>1266
                     /locus_tag="VFD73_11645"
     CDS             1054..>1266
                     /locus_tag="VFD73_11645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74645.1"
                     /translation="MTERKTLRATPAMRETLGIEPQPTPAPPAPVPPVPQPPAPAPSN
                     KAERRREAYLCTRDLLRVRYPAIFGAA"
BASE COUNT          232 a          419 c          404 g          211 t
ORIGIN      
        1 gggccgaacg ctacgactac gaatacgtgc gcaacggtac ggccaacctg ttcatggcct
       61 tcgagccgct cggcggatgg cgtgaggtgg cggtcaccga ccagcgccgg cgtgaggact
      121 gggcgcgctt tgtgcgggac ctggtggacg ggcgctaccg ggaggcggac aagctcgtcc
      181 tggtcatgga ccagctcaac acccactccc cggcctcgct ctatgaggcg ttcgcgcccg
      241 aggaagccaa gcgcctcgcc gatcggctcg aaatccacca cacgcccaag catggctcct
      301 ggctgaatat ggccgaaatc gaactgagcg ccctcggccg cgacctgcca gaccgggtgg
      361 gcgacagggc gacgctggag cgccatgtcc acgcctggca gcatcggcgc aatgctgccg
      421 ctatcagggc cgattggcag ttcacgaccg cggacgctcg catcaagctt cgtaaactct
      481 atccgacaat ggaaggctga cagagcacta ggcccagccc ggaggcgccc tgattgcgtc
      541 cgtcaacgag gtgtaaattc ggatggggtt tgattttgcg cggctccaga aagggcggga
      601 aataggagcc ttgccgcaac ttcgggatgc gcaggctcaa ggggccgagc cgggtatcga
      661 aggtccggtc gcgatagcca ttccggtaat tcagccgctc gccgctgcgt tcatggcgag
      721 ccgcgccgat cagtccttcg acatccgctt ccatcaggag ctgcagcacc gcctcggcga
      781 cggagcgtag gaaatcgccg tcctcgctct tctgcagcag gtcgatcagc gccattctct
      841 cctcggtcat cggatcctcg gtgcggtctg gtgggctggg caaatccacc ctagcgcacc
      901 tgtccgatga ccacctctcg cccgcgctaa atttccacca ccaccgtgga cgctatccac
      961 gcatgcgggc ggggcggaaa cctggttctt cgcgaactgg gcgtgccaat atcttggcag
     1021 gcggagtatt tgtgccagcc gtcgggggag gacatgaccg agcgtaagac actgcgggct
     1081 acgccagcga tgcgggagac gctcggtatc gagccacagc ccacaccagc gccgcctgca
     1141 ccggtgccgc ccgtcccgca gccaccagca ccagcaccct ccaacaaggc cgagcggcgc
     1201 cgtgaggcgt acctgtgcac acgcgatcta ttgcgggtgc ggtatccggc catctttgga
     1261 gcggct
//
LOCUS       DASRPQ010001027         3868 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1377362, whole genome shotgun sequence.
ACCESSION   DASRPQ010001027 DASRPQ010000000
VERSION     DASRPQ010001027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3868
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1377362"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..872
                     /locus_tag="VFD73_11650"
     CDS             <1..872
                     /locus_tag="VFD73_11650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc finger Ran-binding domain-containing
                     protein"
                     /protein_id="HZI74646.1"
                     /translation="RFPMSKTIQEAEPTIDELLEQRKQYEQWLAKLDASGDKAPPAVR
                     QRVRGDYEARLHSVIEQLRSRGAAISEELERYHASQAELDRERRAAEEALAEAEVRYA
                     VGEYTEDEWQRLADESRREIEQLRNKLRAVGAEITRLTQVQGVIASPRAASPAPQPPR
                     PRVEVVEPPPPVAQVAEPVAQPEPARSRYAPQPEPEPEPAAAPVDELAFLKSVADEEP
                     KPRRPSNPNLAAPSMAVPSVGRAPETVQTAVPTVSKAAAGVAKTLKCGECGTLNRPTE
                     WYCERCGAELAGV"
     gene            complement(1086..1346)
                     /gene="rpsT"
                     /locus_tag="VFD73_11655"
     CDS             complement(1086..1346)
                     /gene="rpsT"
                     /locus_tag="VFD73_11655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HZI74647.1"
                     /translation="MPRIRSAAKRMRQARARAATNRTQRSQLRTALRKVRSATGSEAQ
                     AAYAEAIKLLDRAGKKNIIHKNAAARHKSRLAKLVSGQAGKK"
     gene            1525..2199
                     /locus_tag="VFD73_11660"
     CDS             1525..2199
                     /locus_tag="VFD73_11660"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HZI74648.1"
                     /translation="MLALPMLVFAMVAHEYAHAATALRQGDDTAYMLGRVTLNPLPHI
                     DPWMSLLLPALLWFGSGGSFTFGGAKPVPVNSRKFRNFRKGDILVSAAGVTTNLILAL
                     VWSCAFVVIGLVARSFSGMTALFDTAQRMMVYGIWLNLVLCFFNLIPVPPLDGSHLLY
                     HALPPRAGSWYRNLQRFGYLPIFALMFLFRPVISLLLTPALKGMTFLLHLILPFSVGD
                     GWNIFQ"
     gene            2199..2945
                     /locus_tag="VFD73_11665"
     CDS             2199..2945
                     /locus_tag="VFD73_11665"
                     /inference="COORDINATES: protein motif:HMM:NF014654.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HZI74649.1"
                     /translation="MTAPEPPTTALGAGAGFIVELESFSGPLDLLLHLLREEQLEIAD
                     IPIARIADQFLQAISELGLNQAADYLDMASRLVRLKAQMLLPRNPEDDGWEDPRAELV
                     RRLLEYQQIREIAVWMGRAAERRSEQCARGYLPAPPAVPPPPLTLSLLDVLAAVERVL
                     ANIPFPVLHRVVARPLDVESATRRIEALLEVQEEIRWLDALGARPTIVDVLSTLLALL
                     ELAKRGSLKLVQPTPFSPLVIARDAARSAA"
     gene            2920..3504
                     /gene="scpB"
                     /locus_tag="VFD73_11670"
     CDS             2920..3504
                     /gene="scpB"
                     /locus_tag="VFD73_11670"
                     /inference="COORDINATES: protein motif:HMM:TIGR00281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HZI74650.1"
                     /translation="MTPLAQLLEAALFSACRPLTVEELAVLDPDASAPDVRVALEQLR
                     EHYDFDQHGVELVELAGGYQILTRAVHAAALERSQLSVRAPKLSAATLETLAVIAYRQ
                     PVGRVEIEEIRGVSAGGVLRSLQERGLIEVVGRSEALGRPLLYGTTPLFLELLGMRDL
                     ADLPKAEELTIALRPHRPVTEGADDAAAYVEAES"
     gene            3510..>3868
                     /locus_tag="VFD73_11675"
     CDS             3510..>3868
                     /locus_tag="VFD73_11675"
                     /inference="COORDINATES: protein motif:HMM:NF013045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HZI74651.1"
                     /translation="MRLQRALARAGVASRRAAEQLIEDGRVRVDGRPATLGMKVDPDR
                     QRITVGNRQVKIRARRWLAFHKPLGVVTTAQDEEGRRTVLDFIPDPAALTYVGRLDVM
                     TTGLLLLTTDGEAVHRLT"
BASE COUNT          628 a         1237 c         1279 g          724 t
ORIGIN      
        1 aacgttttcc catgagcaaa accatccagg aagctgaacc caccatcgac gagctgctgg
       61 agcagcgcaa gcagtatgag cagtggctcg ccaagctcga tgcgtccggg gacaaggcac
      121 cgccggcagt ccgccagcga gtgcggggtg actatgaggc gcggctccac agcgtcatcg
      181 agcagctccg cagtcgcggc gccgcaatct cggaggagct ggagcgctat cacgcttcac
      241 aggccgagct ggatcgggag cggcgtgccg ccgaagaggc cctcgccgag gcggaggtcc
      301 gctacgcggt gggtgaatac accgaagacg agtggcagcg gctcgccgac gaaagccggc
      361 gtgagatcga gcagttgcgc aacaagctcc gtgctgtggg cgcggagatc acccggctca
      421 cacaggtgca gggtgtcatc gcttctcctc gcgcggcatc gccagcaccg cagccgcctc
      481 gcccacgcgt tgaggtggtg gaaccgccgc ccccagttgc gcaggtggct gagccggtag
      541 cacaaccgga gcccgcacgc tcccgctatg cgccgcagcc ggagccggag ccggagcccg
      601 cggccgcacc ggtggacgag ctcgcctttc tgaaatcggt tgccgatgag gagcccaagc
      661 cccggcggcc cagcaatccc aacctcgccg cgccgagcat ggctgtcccc agcgtgggac
      721 gggctccgga gacggtgcag accgcggtgc ccaccgtcag caaggctgcg gcaggggtgg
      781 ccaagacgct caagtgtggc gagtgcggca cgctgaaccg cccgaccgag tggtactgcg
      841 agcggtgtgg ggcggagctt gccggggttt gaagcgggaa gaaggagcgt gacagggaaa
      901 gagaaagcgt gaacggctgg ctccaaaggc cagtgggagg acgggttgca ctgtcgagct
      961 cgcgaagtgc gtgagtacgt cagcaaaagg ggcgcgcgac tgattgtcgg cgcccctctg
     1021 gcatccagtg ccctgctgag tgagtcccgc ttacgctttt tctttcccgc tcaccctgtt
     1081 gacggttatt tcttacccgc ctgcccagaa accagctttg ccagccggct cttatgtcga
     1141 gcggcggcgt ttttatggat gatgtttttc ttgccggccc ggtcgaggag tttgatcgcc
     1201 tcggcgtacg ccgcctgggc ttccgaccca gtcgccgagc gaacttttct caacgcggtg
     1261 cgcagctggc tccgctgagt gcggttcgtg gcagcccggg cgcgggcttg gcgcatgcgt
     1321 ttggcggcgg acctgattcg tggcacggca acctcagtga gtaggtgaag cgtttggacg
     1381 cgttccgggt gacgcgggcg aaaacatagg ccgctcggcc cgcaaggtca agcgggaagc
     1441 cgttttgact tgcttcaaga gagcatgtaa ccttccaccg ccttcgccta ggatggacac
     1501 ctggatcgac agctcggcga cttcgtgctc gcccttccca tgctcgtctt tgccatggtg
     1561 gctcatgaat acgcacacgc ggcgacggct cttcgtcagg gcgatgatac ggcctacatg
     1621 ctgggccggg tgaccctgaa ccccctcccg cacatcgacc cctggatgag ccttttgctg
     1681 cctgcgcttc tgtggttcgg ctcgggaggg agcttcacct tcggtggagc caagccggtg
     1741 ccggtcaact cgcgaaagtt ccgcaacttt cgcaagggtg acattctggt gtcggcggcc
     1801 ggggtcacca cgaatctcat cctggcgctg gtctggtcct gcgccttcgt tgtcatcgga
     1861 ttggtggcgc gctccttctc cggtatgacc gccctgttcg ataccgcgca gcggatgatg
     1921 gtctacggaa tctggctcaa tctggtgctc tgcttcttca atctgattcc ggttccaccg
     1981 ctggatggat cgcacctgct ctatcatgcg ctgcctccgc gagccgggag ctggtatcgg
     2041 aacctgcagc ggttcggcta tctcccgatc tttgcattga tgttcctgtt tcggccggtg
     2101 atctcactgc tgctcacgcc tgccctcaag ggaatgacct ttctcctgca cctcattctc
     2161 ccattcagcg taggtgacgg atggaacatc tttcagtaat gacggcgccg gagccgccca
     2221 ccaccgcatt gggcgccggt gccggattca tcgtcgagct ggagagcttc tctggtccgc
     2281 tcgatctgtt gctccatctg ctgcgagaag agcagctcga gatcgccgac atcccgatcg
     2341 cccggatcgc cgaccagttt ctccaggcca tctccgagct gggcctcaat caagcggccg
     2401 attacctgga catggccagc cggctggtgc ggctcaaagc ccagatgttg ctgccgcgga
     2461 atccggagga cgatggctgg gaggatccgc gggcggagct ggtgcggcgc ttgctcgagt
     2521 accagcagat tcgcgagatc gcggtgtgga tggggcgagc cgcggagcgg agatcggagc
     2581 agtgcgcccg tggctatttg ccggctcctc cagcagtgcc gccgccgccg ctcaccttgt
     2641 cgctgctgga tgtcctcgcg gcggtcgagc gggtcctcgc gaacattccc tttcccgtcc
     2701 tgcatcgggt cgtggcgcgg ccgctcgatg tcgagagtgc aacccggcgg atcgaggccc
     2761 tgctggaggt gcaggaggag atccgctggc tcgacgcgct gggggcgcgc ccaacgattg
     2821 tcgatgtcct ctcgactctg ctggcgctgc tcgagcttgc caagcgaggc agcttaaagc
     2881 tggtgcagcc tactcccttc tcaccactgg tgattgcccg tgacgccgct cgctcagctg
     2941 cttgaagcag cgctgttttc cgcctgccgt ccgctcactg tcgaagagct tgcggtgctc
     3001 gatccggacg cgagtgcacc ggacgtgcga gtcgccctgg agcagcttcg ggagcactac
     3061 gacttcgatc agcacggggt cgagctggtc gagctggcgg gagggtacca gatcctcacc
     3121 cgagcggtgc acgcggcggc attggaacgc tcgcagctct cggttcgcgc gccaaagctc
     3181 agtgcggcca cactggagac gctcgccgtc atcgcgtacc gccagccagt gggacgggtg
     3241 gagatcgagg aaatccgcgg cgtttccgcc ggcggtgtgc ttcgctcgct gcaggagcgc
     3301 ggactcatcg aggtagtggg acgaagcgag gcgctgggcc gtccgctcct ctatggcacg
     3361 acgccgctct ttctcgagct gctcgggatg cgcgacctgg ccgatcttcc caaagccgag
     3421 gagctcacca ttgcgctccg gccccatcgt ccggtcaccg agggagcaga cgatgccgcg
     3481 gcctacgttg aggcggagtc gtgaccgaga tgcgccttca gcgcgccctg gcacgcgcgg
     3541 gagttgcctc ccgtcgggct gccgagcagc tgatcgagga tggccgggta cgggtagacg
     3601 gcagacccgc caccctcgga atgaaggtcg atcctgatcg tcagcggatc accgtgggga
     3661 atcgccaggt caaaattcgg gctcgacgct ggctggcttt tcataaaccg ctgggtgtgg
     3721 tcaccaccgc ccaagacgaa gaggggcgcc gcaccgtgct cgacttcatc cccgatcccg
     3781 ccgcgctcac ctatgtcggc cgtctcgacg tcatgaccac gggcttattg ctgctgacca
     3841 ccgacggtga agcggtgcac cggctcac
//
LOCUS       DASRPQ010001028         2355 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_438125, whole genome shotgun sequence.
ACCESSION   DASRPQ010001028 DASRPQ010000000
VERSION     DASRPQ010001028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2355
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_438125"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1200)
                     /locus_tag="VFD73_11680"
     CDS             complement(<1..1200)
                     /locus_tag="VFD73_11680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74652.1"
                     /translation="MVAAEQRVSPKRRARRRTPLLARLEQSRKILEDAYARLTEAADS
                     NVGVGPAGEWLLDNFHVIQEHIGEVRESLPTGYYRELPVLAAGPLAGYPRVYELAITL
                     ISHTEGRIGLDNVTGFVTAFQQVTALTIGELWAIPAMLRLGLIESVRRMALRTVQRLD
                     EMVLADTAAARIIAARAGTDGAIDAELDRFVSHPPLLTPIFISRFVQQLRQEAGGHPA
                     LLRLEHWIAEEAMSSQEASTRSTERMAITQVVMANSITSLRAVGRMEWRTFVERESRI
                     EKVLRDDPSGFYAGMTFATRDRYRHSVERIAKRTRLSEETVAQKAVECARSGLEQHPE
                     DQRRAHVGYYLVDEGLADLEGLAHYTPALGESVDRWVRRHPNVVFVGGILCATVAALA
                     AALWLGGP"
     gene            1219..1389
                     /locus_tag="VFD73_11685"
     CDS             1219..1389
                     /locus_tag="VFD73_11685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74653.1"
                     /translation="MLDAEQLAPDRAGEEILSDIRAKAGREDGERAAQAGRDERTSLG
                     LGELGSRESGSG"
     gene            1694..2224
                     /locus_tag="VFD73_11690"
     CDS             1694..2224
                     /locus_tag="VFD73_11690"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI74654.1"
                     /translation="MKTSSLIVSLALCCVVGTVAAQSSSPVSDALRTIAKRSSANLVA
                     AAEEIPADKLDFKPTPAQMSFGDVLVHLTEGNDFLCSTVAGSPAPKRSEIKVEAGKGK
                     LVERLKETFGYCESALAKVTDARLSRKVPWFGNRQITRAQAVLETAQDWADHYSQLAI
                     YLRINGLLPPTAKQKE"
BASE COUNT          409 a          788 c          766 g          392 t
ORIGIN      
        1 aggcccgccg agccagagtg cggcggcgag cgcggccacc gtggcgcaga ggattccgcc
       61 gacgaacacc acattgggat gccggcgcac ccaacgatcc accgattcgc ccaatgccgg
      121 cgtgtaatgg gccaggccct ccagatcggc cagtccctcg tcgaccaggt agtacccgac
      181 atgggctcgg cgctggtctt ccgggtgctg ctccaaaccg gagcgagcgc actcgaccgc
      241 tttctgggcg acggtctctt cgctgagccg ggtccgcttg gcaatccgct caaccgaatg
      301 gcggtagcgg tcgcgggtgg cgaacgtcat gccggcgtag aacccggatg ggtcgtcgcg
      361 cagcaccttc tcgatccggc tctcccgctc gacgaaggtg cgccactcca tccggccaac
      421 ggcgcgcagg ctggtgatgc tgttggccat gaccacctgg gtgatggcca tgcgctcggt
      481 gctccgggtg ctcgcctctt gcgagctcat cgcctcctcg gcgatccagt gctccagccg
      541 gagcagggca gggtgcccgc cggcctcctg gcggagctgc tgcacgaagc gggaaatgaa
      601 gatcggggtg agcagcggcg ggtgggagac gaaccgatcc agctcggcat cgatcgctcc
      661 gtcggttcca gccctggcgg cgatgatccg tgccgcggca gtgtcggcca gcaccatctc
      721 gtcgagccgc tgcaccgtgc ggagcgccat ccggcgcacg ctctcgatca ggcccaggcg
      781 gagcatggcg ggaatggccc acagctcgcc gatggtgagg gcggtgacct gctgaaacgc
      841 cgtgacgaat ccggtcacgt tgtccaaccc gatccgtccc tcggtgtgcg agatcagtgt
      901 gatcgccagc tcgtagaccc gcgggtaccc ggccagcgga cccgcagcga gcaccggcag
      961 ctcgcggtag tagccggtag ggaggctctc ccgcacctcg ccgatgtgct cctgaatcac
     1021 atggaagttg tccagcagcc attcgccggc gggacccaca cccacgttgc tgtcggctgc
     1081 ctcggtcagg cgagcatagg catcctcgag gatcttccgg ctctgctcca ggcgggcgag
     1141 gaggggagtg cggcggcggg cgcgccgctt gggcgacacc cgctgctccg ccgccaccat
     1201 ctgcgcccgc tcggccagat gctcgacgcc gagcagctcg ccccggatcg ggccggcgag
     1261 gagatcctct cggacatcag agcgaaggct gggcgtgagg acggtgaacg agcggcgcag
     1321 gctggacggg atgagaggac ctcgctgggg ctgggtgagc tggggagccg ggagtcgggg
     1381 agcgggtagc cagcggccag cagctataaa ctaggagcta agagctagaa ccctaacacc
     1441 ccggctctcg actcccgact cccgactccc gactttcgac tctggactct ggactctgga
     1501 ctctggactc tcgactttcg actttcgact cgtgactcgt gactcgtgac tcgtgactcg
     1561 cgactcgtga ctatagctga cgtctgacgc ctgacgtctg acgcctgacg tctgacgcct
     1621 gacgactatc ttataaacta acttctgagc cccgggctca aggctcgcat ctcacatcca
     1681 ccgggttcaa gctatgaaaa cgtccagttt gatcgtatca ctcgccctct gctgtgtggt
     1741 gggcaccgtc gcggcgcaga gtagttcccc ggtgtccgac gccttgcgca cgatcgccaa
     1801 acggtccagc gcgaatctgg tcgccgcggc cgaggagatt ccggccgata agttggactt
     1861 caagccgacg ccggcgcaga tgagcttcgg cgacgtcctg gtccatctga ccgaaggaaa
     1921 cgatttcctc tgctcgaccg tcgccggatc gccggcaccg aaacgctccg agatcaaggt
     1981 ggaggcgggc aagggcaagc tggtcgaacg cttgaaagaa acgtttggct actgcgagtc
     2041 ggcgctggcc aaggtcaccg acgcgaggct gagccggaag gtaccctggt tcggcaatcg
     2101 ccagatcacc cgggcacagg ccgtcctgga aaccgcgcag gactgggccg atcactacag
     2161 ccagctcgcc atttacctca ggatcaacgg tctcctgccg ccgacggcga agcagaaaga
     2221 gtaaggaccc atgcgctctc gcccggtcgc actcgccagc tggcttctct gcaccatcgg
     2281 agggattccc atctctgccc agactgcccc gcctgccgca cccaagcgcg aggtggcgga
     2341 tacctacttc ggcac
//
LOCUS       DASRPQ010001029         1018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3887811, whole genome shotgun sequence.
ACCESSION   DASRPQ010001029 DASRPQ010000000
VERSION     DASRPQ010001029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3887811"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            159..782
                     /locus_tag="VFD73_11695"
     CDS             159..782
                     /locus_tag="VFD73_11695"
                     /inference="COORDINATES: protein motif:HMM:NF025052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI74655.1"
                     /translation="MGRYQNVNETVRDSQAGQAPTLFLMVGLPASGKTVRARELAAER
                     GALRLTPDDWALSLFGHEDRHQERPDGKRWLLEGRLVALAIDVLRLRLSVVLDFGLWS
                     RDERSALRWMAASVGASCEIVYLPVEREVQWSRIENRWKSMPEQTFPMAEAELDPWRD
                     AFEVPDAEELSGSFLPSPPPGDESWFDWAQRFWPSLAQSLNGRLPER"
BASE COUNT          162 a          311 c          363 g          182 t
ORIGIN      
        1 ctgtgctcgc tgtcgaccgg cacgatctgc ccgggctccg cgagggccgt gacgacgggg
       61 ccgccgatga tgagtgagcg ccgtcaactg tctagacacg ggccacacgg acaggtctgg
      121 tctcatggcc tgcgtgacag atcggtatca gaacgtgaat gggtcggtat cagaacgtga
      181 atgagacggt gcgagattcg caggcgggtc aggcacccac acttttcctg atggtgggcc
      241 ttcccgcgtc tgggaagacc gtgcgagcgc gggagctggc ggcggagcgt ggagccctgc
      301 ggctcacgcc cgacgactgg gcgctctccc tcttcggcca cgaagaccgt caccaggagc
      361 ggcccgacgg caagcggtgg ctactggaag gtcgactcgt cgcactggcc atcgacgtcc
      421 tgcgcctacg gctcagcgtc gtgcttgact tcggactttg gtctcgtgat gagcgctccg
      481 ccctgcgctg gatggccgct tcggtgggag cgtcatgtga gatcgtgtac ctgccggtgg
      541 aacgcgaggt gcaatggagc cggatcgaga accgctggaa aagcatgcca gagcagacat
      601 tccccatggc tgaggctgag ctcgacccct ggcgcgacgc attcgaggtc cccgacgcag
      661 aggagctttc cggttcgttt ctgccctccc caccgcccgg ggatgagagt tggtttgact
      721 gggctcagcg attttggccc tccctcgctc agagcttgaa cgggcgactc cccgagagat
      781 aaccgtgggc gggtcctcgc gggggtgaca ggctgcgcca tgggcgtgtc ggcgagctgc
      841 gccggcaccc actggtggcc gtggagccac tgctcttcgg gccgcaggtt gggcgggatc
      901 cggcggtgca gagccatgtc tacgagctgg ccgaggaagc gtacaggccg gctcgtccgc
      961 cgtcctcctg gtcatggaac gagttcgtcc cggtggacgt gaggaaccgc tggagagc
//
LOCUS       DASRPQ010001030         1745 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2316881, whole genome shotgun sequence.
ACCESSION   DASRPQ010001030 DASRPQ010000000
VERSION     DASRPQ010001030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2316881"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..278)
                     /locus_tag="VFD73_11700"
     CDS             complement(<1..278)
                     /locus_tag="VFD73_11700"
                     /inference="COORDINATES: protein motif:HMM:NF014215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HZI74656.1"
                     /translation="MRSFLLGACITAIAIPGLAGQSPIRVDTGLAVPMRDGVVLRADL
                     YRPVEPGKSPALVYRTPYGRTDTVGGSAFIHAAVRRGYAVLLQDVRGR"
     gene            complement(275..700)
                     /locus_tag="VFD73_11705"
     CDS             complement(275..700)
                     /locus_tag="VFD73_11705"
                     /inference="COORDINATES: protein motif:HMM:TIGR00149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HZI74657.1"
                     /translation="MPTHSSRLKRWTLHLAAEFGHADITSDLQRLVRDSGIQTGILTV
                     QMIGSTGGMTTIEYESGALNDLRQALERVAPVNEEYAHNARWGDGNGFSHVRSAILKT
                     SLSIPVIDGNLALGTWQQVVAINLDNRDRMRELVAVLVG"
     gene            complement(718..1290)
                     /locus_tag="VFD73_11710"
     CDS             complement(718..1290)
                     /locus_tag="VFD73_11710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74658.1"
                     /translation="MVKRRSKPRARKSPRRSPRELARHADLIIQEGERRAAEYSRLGI
                     TMVFVSRQELIRNLSGKSVHSPFLTWIGYSGAVRGATFLIDFGIMQPDAYLVYSEANL
                     GLCYCWSDAGGLTDPGLTLARAVPSVGVIQVPIGTLNSRTMPYTLSSTHLIPSSFRLG
                     PADLNYFLYMPDPFGPATLLKRGTIRLLVS"
     gene            1456..>1745
                     /locus_tag="VFD73_11715"
     CDS             1456..>1745
                     /locus_tag="VFD73_11715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74659.1"
                     /translation="MISRLAAHVRRALLPFFAVTAVALSSCGRDSSTPTGPSAAAPDT
                     PIAPAAELSLAVAAQARHTDQLLAVPGVVGTAVGLDERGNAQVKLFTLTNGVR"
BASE COUNT          321 a          557 c          551 g          316 t
ORIGIN      
        1 taccgaccgc gcacatcctg aaggaggacg gcgtagccgc gcctgacagc ggcatggatg
       61 aacgccgacc ctccgaccgt atcggttcgg ccgtatggcg tccggtagac cagcgccggg
      121 gactttcccg gttcgacagg acgatagaga tcggcccgga gcacgacccc gtcccgcatg
      181 gggaccgcga ggccggtgtc gacccgaatc gggctctgcc cggcgagacc gggtatcgca
      241 atcgccgtga tgcatgcacc gaggaggaac gatctcatcc gaccagcacc gccaccagct
      301 ctcgcatccg gtctcgattg tcgagattga tggcgaccac ctgctgccaa gtgcccagcg
      361 cgagattacc gtcgatcacc ggaatggaga gactggtctt gaggattgcg ctcctgacat
      421 gagagaagcc gttcccgtct ccccagcgtg cattgtgagc gtattcctca tttactggag
      481 cgacccgctc cagagcctgg cgcaggtcgt tcagcgcccc tgattcgtat tcgatcgtcg
      541 tcatgccccc ggtcgaaccg atcatctgca ccgtcaggat tccagtttga atgccggaat
      601 cgcggaccag cctttgcaaa tcggaggtga tgtcggcgtg gccgaactcc gccgccagat
      661 gaagggtcca gcgtttcagt cgagaggaat gagtcggcat cagaggggac agcggtgcta
      721 gctcaccagc agccggatag ttccccgctt gagcagtgtc gcgggaccaa agggatcggg
      781 catatagagg aagtagttga ggtcggccgg acccaggcga aagctgctgg ggatgaggtg
      841 cgtggacgag agagtgtacg gcatcgttct ggagttgaga gttccgattg ggacctgaat
      901 gactcccacg ctgggcaccg cgcgagcgag ggtaagcccc gggtcggtca atccgccggc
      961 atcagaccag caataacaga gtcccaggtt cgcctcagag tagaccaggt aagcgtccgg
     1021 ctgcatgatg ccgaagtcga tcaggaacgt ggccccacgc accgctccgc tgtagccgat
     1081 ccaggtgaga aagggtgagt ggacgctctt tccactcaga ttgcggatca gctcctgccg
     1141 cgacacgaac accatcgtga tgcccaagcg cgagtattca gcggctctcc gttcgccctc
     1201 ctggatgatc aggtcggcat gccgggccag ctcgcgaggc gagcggcgcg gggatttcct
     1261 ggcgcggggc ttggatctgc gcttgaccat cgaccgctcc ggacgggtga cgtacgaagc
     1321 tatccagcag cgacggtgac ggctatggac ttacgggctc ccggctgact tcggctcttt
     1381 tttcccgtag catgccccgt ccgccgatct gcaccacaga ttgctctcct gaccccagtc
     1441 gtcgcccgag gcaccatgat ttcccgtctg gccgcgcacg ttcgccgggc tctgctccca
     1501 ttctttgccg ttaccgctgt cgcgctctcc agctgcggcc gcgacagctc aacaccgacc
     1561 ggtccgagcg ccgctgctcc cgatacgccg atcgcccctg cggccgagct cagcctggcc
     1621 gtggcagcac aggcccgtca taccgaccag cttctggccg ttccgggcgt ggtcggcacc
     1681 gcggtgggac tggatgaaag gggcaatgcc caagtgaagc tcttcaccct gaccaatggg
     1741 gtgcg
//
LOCUS       DASRPQ010001031         1361 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4523659, whole genome shotgun sequence.
ACCESSION   DASRPQ010001031 DASRPQ010000000
VERSION     DASRPQ010001031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1361
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4523659"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(180..389)
                     /locus_tag="VFD73_11720"
     CDS             complement(180..389)
                     /locus_tag="VFD73_11720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74660.1"
                     /translation="MAVVAGDTAIALAAILAIAHFTAGGKAAQTLPQVVAILSSAFTA
                     IGTMTTAYFGIKSMSNTAKNLVASR"
     gene            769..1170
                     /locus_tag="VFD73_11725"
     CDS             769..1170
                     /locus_tag="VFD73_11725"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HZI74661.1"
                     /translation="MATESRHISEWIGRPADQVYDYASDPANLPRWAPGLGSSVENSA
                     GQWFVQTSMGRVGFAFVPRNEYGVLDHDVTLPSGEVVYNPMRVIPDGHACEVVFTLRR
                     RPGMSDAEFSADAGAVAADLARLKRNLEGHS"
     gene            complement(1178..>1361)
                     /locus_tag="VFD73_11730"
     CDS             complement(1178..>1361)
                     /locus_tag="VFD73_11730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002340535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI74662.1"
                     /translation="NQRGLSQAQLAAALAVSRQTVISIENGRYMPSLPLAFRIARFFD
                     LPVDKMFTPEDKDLGA"
BASE COUNT          224 a          409 c          473 g          255 t
ORIGIN      
        1 gcagacggtg gccaggcttc tcaccgagga tggcctgatc gtcggcatct cctacgcccc
       61 ggcgtttcac gacggagaac atgcctgaac accggcggct caggctgccg tgttgtgcgt
      121 agcgggcagc ggatcggctc cgctgcccgc tacgctgccc caggtcggcg ctggggagat
      181 cacctggacg cgacgagatt cttcgcggtg ttcgacatgg acttgatgcc aaagtaagca
      241 gtggtcatag tgccgatagc ggtgaaagca ctgctcagga tggcgacgac ctgagggagg
      301 gtttgggcag ccttcccgcc cgcagtgaaa tgggcgattg ccaggatggc ggcaagcgct
      361 atagcggtat cgccagccac gaccgccatc aggcccgccc acgcacggac cttctccaca
      421 ccggaagttg gcttctcaac accgccagtt gagttcccgg aacctgagtt cccggaaccg
      481 gcggttggct caaccgatcc gttgatatct gatgccgttg gctgcatggg ttctggcact
      541 gaagtcatga gggattctcc tttcgggccc tccgttgagg gatattcgag gttgtcgtga
      601 gggcactgcc ttatagaggt gctgcggagg ccggttgata caccgcagca ggaatcggcg
      661 atctgctgta ccgcggtgca tgcggccgcg gggttgtccg tgggcgccgg catctgcctg
      721 tccggttcgt tcaatcgcgg cgcgtagtgc ccctgacatg gtggagcgat ggctacggaa
      781 tccaggcaca tcagcgagtg gatcggccgc cccgccgatc aggtctatga ctatgcttcg
      841 gacccggcca acttgccgcg gtgggcgccg ggactcggga gttcggtcga gaactcagcc
      901 gggcaatggt tcgtgcagac ctcgatgggg cgggtcggct tcgcctttgt gccgcgcaat
      961 gagtacggcg tgcttgatca cgacgtcacg ctgccctcgg gcgaggttgt ctacaacccc
     1021 atgcgggtca tccccgacgg ccatgcctgt gaggtggtgt tcacgctacg gcggcgcccg
     1081 ggcatgagcg atgcggagtt cagcgcggac gcgggtgcgg tggccgccga cctggccagg
     1141 ctcaagcgga acctcgaagg gcactcatag ccgggcctca tgcgcccagg tccttgtcct
     1201 cgggggtgaa catcttgtcc accggcaggt cgaagaaccg ggcgatccgg aacgcgagcg
     1261 gcagcgacgg catgtagcgg ccgttctcga tggagatcac tgtctgccgg gagacggcca
     1321 gggcggccgc gagttgggcc tgggacagcc ctcgctggtt g
//
LOCUS       DASRPQ010001032         1563 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3575067, whole genome shotgun sequence.
ACCESSION   DASRPQ010001032 DASRPQ010000000
VERSION     DASRPQ010001032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1563
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3575067"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..809
                     /locus_tag="VFD73_11735"
     CDS             <1..809
                     /locus_tag="VFD73_11735"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HZI74663.1"
                     /translation="TIADVLQARTAASQADLAVETTEGDLQTSRGALALALGLPANLP
                     YDIDSVAGQLPMSQVVDSVDTLIKRAVAQRPDLAAARAEFESSQARISIARANRLPSL
                     VLNGSGGRTYTTTLPQGGNNYTISLGLRVPLFAGFSRLYDQRQAVALADAADARADAL
                     GQQVVFQVFSSYYALQTAARRVRTTGVLVASAEQSNEVALARYRAGVGSVLDLLSAQS
                     ALANARAQQVLVRLEWNTSLAQLAHDSGVLDPTGGSSLRLKPAPPDTMPR"
     gene            815..>1563
                     /locus_tag="VFD73_11740"
     CDS             815..>1563
                     /locus_tag="VFD73_11740"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HZI74664.1"
                     /translation="MKSPAPLRLGSTVLCLLAAAACSKKDPTPTPRVPVTVAAVERRA
                     MPFDIDATGTVEPIQTVAVQAQVGGILRRIAFKEGDEVKQGQLLFELDPRPYQAALNQ
                     ALAALSRDRAQATNAEQDEERYKTLAEKQYVTAQQYAQVQTTAAAARATLAGSQAAVE
                     QARLNLQYATIRAPISGRTGSLLIRQGNLVRTSATQPLVTINQIRPILVRFAVPAPNL
                     PLIQEHRGKDVVVRANAPGGGDPSEGTLSFV"
BASE COUNT          261 a          548 c          502 g          252 t
ORIGIN      
        1 ctacgatcgc agatgtgctc caggcgcgga ctgcggcctc ccaagccgat cttgcagtcg
       61 agaccaccga aggagacctg cagacctcga gaggagcact ggcgctggcg ctggggttgc
      121 cggccaatct gccttacgac atcgactcgg ttgccgggca gctccccatg tcacaggtgg
      181 tggacagcgt cgacacgctc atcaaacggg ccgtggctca gcggcccgac ctggccgccg
      241 cgcgagcaga gttcgagtcc tctcaggccc gcatttccat tgcgcgggcc aaccgtttgc
      301 cctcactggt attgaatggg agcggcgggc gcacctacac caccacgctg ccccagggcg
      361 ggaacaacta cacgatctct ctcggtctcc gggttcccct ctttgccggc ttctcccggc
      421 tctacgacca gcggcaggcc gtggccctgg ccgatgccgc cgatgcccgc gctgatgcgc
      481 tcggccagca ggtggtgttt caggtcttca gctcgtacta cgccttgcag accgctgccc
      541 gcagggtccg caccaccggc gttctcgtgg cgagcgcgga acaatccaac gaggttgcgc
      601 tggcccgcta ccgggcggga gtgggctcgg tgctcgacct cctgtcggcc cagtccgcac
      661 tggccaacgc gagggcgcag caggtccttg tccgtttgga atggaatacc tctctcgccc
      721 aactggcgca cgactccggc gtcctcgatc cgaccggggg gagctcgctt cggctgaaac
      781 cggctccgcc cgacacaatg ccacgatgat gcgcatgaaa tctccggctc cgctccgact
      841 cgggagcact gtcctctgcc tgctcgcggc agcggcctgt tccaagaaag atcccacgcc
      901 tacgccccgg gttccggtga cggttgccgc cgtggagcgt cgagcgatgc ccttcgacat
      961 cgacgccacc ggcaccgtcg agccgattca gactgtcgcg gtgcaggccc aggttggtgg
     1021 catccttcgc cggattgcct tcaaggaggg cgacgaggtg aagcaggggc agctcctgtt
     1081 cgagctggac ccccgaccct accaggcggc gctcaaccag gcactggcag cgctgagccg
     1141 cgaccgggct caggcgacca atgcggagca ggacgaggaa cggtacaaga cgttggccga
     1201 gaagcagtac gtcaccgcgc agcagtacgc gcaggtgcag acgaccgccg ccgccgcccg
     1261 cgccaccctg gcgggcagcc aggccgcggt ggagcaggct cggctcaatc ttcagtatgc
     1321 gacgatccgg gcgccgatca gtggccgcac cgggagtctg ctgatacggc aggggaatct
     1381 ggtccggacc agcgccaccc agccgctggt cacgatcaat cagatccgcc cgatcctcgt
     1441 ccgtttcgcg gtgcccgcac cgaacctgcc gctcattcag gaacatcggg ggaaagacgt
     1501 cgtcgttcgc gcgaacgctc ccggcggtgg tgatcccagc gaaggcacgc tcagcttcgt
     1561 gga
//
LOCUS       DASRPQ010001033         1172 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3270609, whole genome shotgun sequence.
ACCESSION   DASRPQ010001033 DASRPQ010000000
VERSION     DASRPQ010001033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1172
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3270609"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            170..388
                     /locus_tag="VFD73_11745"
     CDS             170..388
                     /locus_tag="VFD73_11745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74665.1"
                     /translation="MAENGWFAGNHGPEGVYSSLKGSMLAPHIAGPWTAGVPNSVQVD
                     TSYQAGSGWASNTIVNTGMTGGGGTMLH"
     gene            398..610
                     /locus_tag="VFD73_11750"
     CDS             398..610
                     /locus_tag="VFD73_11750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74666.1"
                     /translation="MDEDETTEETNHCVAKRHDRWSVLAIGLQWATDVAGATTAMFGN
                     YATAAAQHHHQMKYDGRFKEITWEHQ"
     gene            595..1005
                     /locus_tag="VFD73_11755"
     CDS             595..1005
                     /locus_tag="VFD73_11755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74667.1"
                     /translation="MGTPVSGPGQFSKRTDKAVENANLSTPNADYGEAKENRELRQAA
                     PMASGPNFAEMFGDPGARVIDFAAPSTQPGVPVTSGAALGPGASDQALGLPDQQGEDL
                     QGLLPYLPVLEFMANQPGASWAMRNIVRKAKALQ"
BASE COUNT          252 a          373 c          368 g          179 t
ORIGIN      
        1 atgggcggag gaggacagca gggtggagcg ccagccccaa gccagccagg agcgcctacg
       61 gcgccccagg gtatggacat gatgagcctg cttgcaggtc tcaccggcaa gggcgaagca
      121 actatgagcg ccaggactca gcgccaggca gctatctaag gagaaccgaa tggccgagaa
      181 cggctggttc gcaggtaacc acggacccga gggcgtctac tcgtcgctca agggctcgat
      241 gcttgccccc cacatcgctg gtccatggac cgccggtgta cccaactcgg tccaggtcga
      301 caccagctac caggctggtt cgggatgggc ttccaacacc atcgtcaaca ccggcatgac
      361 cggtggtggc ggaaccatgc ttcactaagg agtactgatg gatgaggacg agaccaccga
      421 agagacgaac cactgtgtcg ccaagcgtca cgacaggtgg tccgtcctcg ccattggcct
      481 ccagtgggct actgacgtgg ccggtgctac gactgcgatg ttcggcaact acgccactgc
      541 cgcagcccag caccaccacc agatgaagta cgacggacgc ttcaaggaga tcacatggga
      601 acaccagtaa gtgggccagg gcagttctcc aagcgcacgg acaaggcggt cgagaacgcc
      661 aacctctcca cccccaacgc cgactacggc gaggccaagg agaacaggga gctgcgacag
      721 gcagctccca tggcatcggg gccgaacttc gccgagatgt tcggagatcc tggcgcacga
      781 gtcatcgact tcgcagcacc cagcacgcag ccaggcgtcc ccgtcacgtc aggcgcagcg
      841 ctcgggccgg gtgcatcgga tcaggcgcta ggtctgcccg accagcaggg tgaagaccta
      901 cagggtcttc tgccctacct accggtcctt gagttcatgg ccaaccagcc gggggcttcg
      961 tgggccatgc gtaacatcgt caggaaggcg aaggctctcc agtgaccgaa cctgagtaca
     1021 cctacggtgg gcagtggttc gatgacatgg ggagcctcgc tctctccttc accggctcac
     1081 cgcgcgtggg tatcgatatt gcgcgctccg gcatcagccg ggcgcaggcc aacgagatgg
     1141 ccaccaagct tatgagcagt gggatcactc cg
//
LOCUS       DASRPQ010001034         1190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2647230, whole genome shotgun sequence.
ACCESSION   DASRPQ010001034 DASRPQ010000000
VERSION     DASRPQ010001034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2647230"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            200..>1190
                     /locus_tag="VFD73_11760"
     CDS             200..>1190
                     /locus_tag="VFD73_11760"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HZI74668.1"
                     /translation="MVQTRASFRGSTTLMSCWLILAGIAAPALLSAQQPDTAKTDTAR
                     VTTLKTIEVTNSIAPTAGPAIGSGIPARISTVTGAAIEAWEPRLLADALGSQTGISLY
                     DDLGSPFKLNLSSRGFNVGPVVGLPPGISVFLDGVRQNEPDAAEVNFDLLPMEHVQRV
                     ELLSGSGSLLGSNSLGGAINLITRRGTGPLEAEAELSGGSYGSYSGEASVDGVSHGGW
                     DYYLAGGYENEDGWREATGADNLNGFLNLGRRGPAHGISLQAFGAESNAETAGSLPES
                     IFSTSPSTNFTIGDFDDLNQLQASVNGYTTLGSSRGSFTAYVRRSHAERFNVNQ"
BASE COUNT          221 a          368 c          377 g          224 t
ORIGIN      
        1 tggcagctgc tccacgatgg agcgccactg accagcttcg ctgcggaacc gagtgagtcg
       61 cccggatcgg taaaagaaaa aatttttgga tggttagagg cgaaccggtc gcggccggcg
      121 ctggatgtag gccggcagta attctaaatt ttctgacgcg gccccccgca ggaatatcct
      181 cggggggctt tatttatgta tggtccaaac tcgcgcgtcc tttcggggaa gcaccaccct
      241 gatgagctgc tggctcattc tcgccggcat cgccgctcct gcactgctca gcgcccaaca
      301 gccggacact gccaagaccg ataccgcccg ggtgactacc ctgaaaacca tcgaggtcac
      361 caactcgatc gcgccgaccg cagggccggc gatcggctcc ggcatccccg cgcgaatctc
      421 gactgtcacc ggcgcagcca tcgaggcctg ggagccacgg ctgctggcag atgcgcttgg
      481 cagtcagacg ggtatctcgc tgtacgacga tctcggctcg cccttcaagc tcaatttgag
      541 cagccgcggt ttcaacgtgg gtcctgtggt gggactcccg cccggcatct cggtgttcct
      601 cgatggcgtg cgccagaacg agccggacgc ggcggaggtg aatttcgatc tgctgccgat
      661 ggaacatgtt cagcgagtcg agctgctcag tgggtccggc tcgctgctcg ggtccaattc
      721 tcttggcggt gccatcaatc tgattactcg ccgagggacc ggtccgctgg aggcggaggc
      781 agagctgtcg ggcggttcat acggctccta ctccggagag gcctccgtcg atggagtcag
      841 ccacggcggc tgggattatt acctagcggg aggctacgag aatgaggatg gctggcggga
      901 ggcaaccggt gcggacaatc tgaacggctt cctgaatctc ggtcgtcgcg gcccagccca
      961 tgggatcagc ctccaggcgt tcggcgcgga gtccaacgcc gagacggcgg ggtcactgcc
     1021 ggaaagcatc ttttcgacgt cccccagcac gaactttacc atcggcgact tcgatgacct
     1081 gaaccagctg caggcttcgg tgaacggata taccacgctg ggcagtagcc gcggcagctt
     1141 taccgcctac gtcaggcgca gccacgcaga gcgcttcaat gtgaaccagg
//
LOCUS       DASRPQ010001035         1055 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1379031, whole genome shotgun sequence.
ACCESSION   DASRPQ010001035 DASRPQ010000000
VERSION     DASRPQ010001035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1379031"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="VFD73_11765"
     CDS             <1..188
                     /locus_tag="VFD73_11765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74669.1"
                     /translation="TNDATARNAYTSQIDQQVMKQAAILPAVYAKSLIYRAPNITNVY
                     VQRYYGMYNYAVLGLKS"
     gene            273..>1055
                     /locus_tag="VFD73_11770"
     CDS             273..>1055
                     /locus_tag="VFD73_11770"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI74670.1"
                     /translation="MVTFIVRRLIATIFLLIVVSMITFAIFFLIPRLAGQTTYQLATQ
                     YVGRNPTPAAILDIETKLGLNEPIYVQYGRFLKALVFGEHYTSGTGSTYCPPPCFGYS
                     FKTQQPVWPQMVSDLPVTISLAIGAAILWLVGGVTIGVISALKRGTIFDRFSMGIALA
                     GVSLPIFFTGLISLELFSYKWPIFPNVTFVPFTQNPALWARNLVLPWVTLAFLYAALY
                     ARLTRAGMLETMSEDYIRTARAKGLQERTVIVKHGLRAALTPI"
BASE COUNT          194 a          350 c          314 g          197 t
ORIGIN      
        1 ccaccaacga tgcaacggcc cgcaacgcct acaccagcca gatcgaccag caggtgatga
       61 agcaagcggc gatcctgccg gcggtctacg ccaagtcgct gatctaccgg gccccgaaca
      121 tcaccaacgt ttacgtccag aggtactacg ggatgtacaa ctacgcggtg ctcggcctga
      181 agagctagcg gccagtaatt ccaacagaag agagcgggtg aaggcactgg tgcccggccg
      241 gggatcccgg ccgggcacca gggccgccta cagtggtcac tttcattgtc cggcgcctga
      301 tcgccacgat cttcctgctg atcgtggtca gcatgatcac gttcgcgatc ttcttcctga
      361 tcccccggct ggcggggcag accacctacc agctggccac ccagtacgtg gggcgcaatc
      421 ccactcccgc ggccatcctg gacatcgaga ccaagctcgg cctcaatgaa cccatctacg
      481 tgcagtacgg caggttcctg aaggcactgg tcttcggtga gcactacacc tcggggacgg
      541 gctcgaccta ctgcccgccg ccgtgtttcg gctactcctt caagacccag caaccggtat
      601 ggccgcagat ggtcagcgac ctgccggtga ccatctcgct ggccatcgga gcggcgatct
      661 tgtggctggt cggcggggtg acgatcggcg tgatctccgc gctgaaacgc ggcacgatct
      721 ttgaccggtt ctcgatgggc atcgcgctgg ccggggtgtc actgccgatc ttcttcaccg
      781 gcctgatctc cctggagttg ttcagttata agtggccaat attcccgaac gtgacgttcg
      841 tcccctttac ccagaatccg gcgctctggg cgaggaacct tgtcctgcca tgggtgacgc
      901 ttgccttcct ttacgcggcg ctctacgccc ggctgaccag ggcgggcatg ctggagacga
      961 tgagcgagga ctacatacgc acggcccggg ctaaaggcct gcaggagcgc accgtgatcg
     1021 tcaaacacgg gctgcgcgct gcgctcaccc cgatc
//
LOCUS       DASRPQ010001036         3433 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2648088, whole genome shotgun sequence.
ACCESSION   DASRPQ010001036 DASRPQ010000000
VERSION     DASRPQ010001036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3433
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2648088"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..249
                     /locus_tag="VFD73_11775"
     CDS             <1..249
                     /locus_tag="VFD73_11775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74671.1"
                     /translation="QLLQNKCRAVVAYGEAGPLIVKDLGDSLKVVPAHSFDEVLTTAR
                     DLARPGEAVLLSPACSSYDMFRNYEERGERFRAAVEAL"
     gene            246..1502
                     /locus_tag="VFD73_11780"
     CDS             246..1502
                     /locus_tag="VFD73_11780"
                     /inference="COORDINATES: protein motif:HMM:NF013279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative peptidoglycan glycosyltransferase FtsW"
                     /protein_id="HZI74672.1"
                     /translation="MIRPVRHPGELRWETRLLAMVTAGLLVFGIAATYGAASVITLQG
                     HDAGLGFAMRQLIGAAMGGVLLLVASRVDYYRWRQVAWPLLLLTLGFLLIPLLPFTHH
                     LAPSVNGARRWVDLGPLNFQPSELARLVVVIWCAMLASKKGTQVREFKKGVLPFLLML
                     GLVALLILLEPNLSMATLVALLGGLVLFTSGAKIGHFGAITGIGLILVLHQIRDAQYR
                     LARFVTFLNPGDATTQAGFQIHQSLVGIGSGQLFGVGFGQGQQKLGYLPYAYSDFLFS
                     TIGEEWGFVGICVVVALFALFCWLGFRIARTASDPFGQYLAVGLTATIGLTAFMHMAV
                     SLGLIPTTGLTLPFMSYGRSSQVISLLGTGILINVGRLRGSPRAAGPRERRKESTGHR
                     GSGTEARPERRNSRQASGRLTGRSRG"
     gene            1495..2592
                     /gene="murG"
                     /locus_tag="VFD73_11785"
     CDS             1495..2592
                     /gene="murG"
                     /locus_tag="VFD73_11785"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: protein motif:HMM:NF016027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HZI74673.1"
                     /translation="MADKPRRILIAGGGTGGHLMPALAIATAIRESGADIEPVLVGAV
                     RGVEARILPTRDFRFHLLPSEPIYRRTWWKNFRWPIVAGRLLRAVGGLFELERPVAVL
                     GTGGYASGPVVWWAARHGISTAIQEQNAYPGIATRWLSRRVRHVYLGLPEARRLLRFG
                     SRTEVFDTGNPITPPSPERSEAARRRFALDDARPVLLITGGSQGSLAINRTVAGWLDR
                     TTQIPAQLIWVTGKGSHKEFTRYNAPGVRVLDFLDPMADAYSVADLVVSRAGMITVAE
                     LCAWGLPNILVPLPTAAADHQTHNARVLAEAGASIFLPQSDLTPDRLGQLVGELLRDP
                     ARREQMGQRALARGRPNSAADIVSKLLTLAR"
     gene            2641..>3433
                     /locus_tag="VFD73_11790"
     CDS             2641..>3433
                     /locus_tag="VFD73_11790"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase domain-containing protein"
                     /protein_id="HZI74674.1"
                     /translation="MALFNPADKRSVHFMGIGGAGMSALALIALRRGVAVSGCDIDPS
                     GAADLASLGVSIRQGHDPSHLTGTRAVVVTAAVPEGHPELEHARQLGLPIIPRKVALA
                     ELIAGARSIAISGTHGKTTTTVMTTEALTAAGLNPTGIAGGRVSAWGGNARVAGDQLF
                     VVEADEFDKAFLTLYPEIAVVNNVEPDHLECYGSMTALEDAFVEFAGRARVAIVSADD
                     PGARRIGARLKTSVCGFGVDSGADIRISDIVQRADATEACIRWRSG"
BASE COUNT          574 a         1070 c         1104 g          685 t
ORIGIN      
        1 cagctgctcc agaacaaatg ccgggctgtg gtggcgtacg gagaggcagg tcctctcatc
       61 gtcaaggatc tcggcgacag tctgaaggtg gttcctgccc attccttcga cgaggtgctc
      121 acaacggcaa gagacctcgc ccgaccgggc gaagcggtgc tgctctctcc ggcgtgctcc
      181 agctacgaca tgttccggaa ctacgaagaa cggggcgagc ggttccgcgc cgcagtggag
      241 gcgctgtgat ccggccggtc cgccacccgg gcgagctccg ctgggaaact cggctgctgg
      301 ccatggtaac cgcaggtctt ttggtattcg ggattgcggc aacctacggc gctgccagtg
      361 taatcaccct ccagggacac gatgccggcc tcgggtttgc catgcgtcag ctcatcgggg
      421 cggccatggg tggtgttctg ctcctggtgg cgtcacgggt tgactactac cgatggcgac
      481 aagtggcctg gccccttctg ctcctcacgc tgggttttct cctcattcct ctgcttccct
      541 ttacccacca tctcgcgcct tcggtcaatg gtgcgcgccg gtgggtcgac ctcggacccc
      601 tcaactttca gccctccgag ctggcgcgac tggtcgtcgt gatctggtgt gccatgctcg
      661 cgtccaagaa gggcacccaa gttcgcgagt tcaagaaggg ggtgctcccg ttccttctca
      721 tgctgggtct ggttgccctg ctgattcttc tggaaccgaa tctctcgatg gcgacgctag
      781 tcgcgctgct cggcggtctg gtcctgttca cgtctggcgc aaagatcggg cactttggcg
      841 cgatcacggg catcggtctg attctcgtat tgcatcagat ccgggacgcg caataccgtc
      901 tggcccgctt cgtcaccttc ctcaatcctg gggacgccac cacccaggcc gggttccaga
      961 tccaccagtc attggtggga attggatcgg gacaattgtt cggcgtcggc ttcggtcagg
     1021 gccagcagaa gctcgggtat ctaccgtatg cctactcgga tttcctgttc agcacgattg
     1081 gcgaggagtg gggctttgtc gggatctgcg tggtcgttgc cctcttcgct ctgttctgct
     1141 ggctgggctt tcggattgcc cgcacggcat ccgatccgtt tgggcagtac ctggcagtag
     1201 gactgaccgc aacgattgga ctcaccgcgt tcatgcatat ggcggtgtcg ttgggactga
     1261 ttcccacaac cggtctcacg ttgccgttca tgtcgtacgg tcgatccagc caggtgatct
     1321 cgttactggg gaccggcatc ctcatcaatg tcggcaggct gagagggagt ccacgcgccg
     1381 ccggcccgag agagcggcgg aaggagtcaa ccggacaccg gggcagcggg accgaagcga
     1441 gacccgagcg cagaaacagc cgacaggcga gcgggcggct gaccggacgg agccgtggct
     1501 gataagcccc gtcggatact gattgcggga ggtgggaccg ggggtcacct gatgccggca
     1561 ctcgcgatcg caacggcaat acgggaaagc ggagccgata tcgagccggt gctcgtcggc
     1621 gcggtacgag gagtggaagc tcggatcctg ccaacccgcg actttcgatt tcatctgctc
     1681 ccgtcggaac cgatctatcg gcgcacttgg tggaagaatt tccgctggcc gatcgtggcc
     1741 ggccgattgc ttcgagccgt cggcggatta ttcgagttag agcgacctgt ggccgtgctt
     1801 ggcaccggcg gctacgcatc cggcccggtc gtttggtggg cggcgcggca tggaatctcg
     1861 accgcaatac aggaacaaaa tgcgtatccc ggcattgcga cgcgttggtt gagccgtcgg
     1921 gtacgtcacg tgtatctcgg tctcccggag gcgcggaggt tgctccggtt cggttcccgc
     1981 accgaggtgt tcgataccgg caatccgatt accccgccat ctccggagag aagcgaagcc
     2041 gcccggcgca ggttcgctct cgatgacgcc cgccccgtcc tgctcatcac gggcggaagt
     2101 cagggctcgc tggcgatcaa tcgcacggtg gccgggtggc tggatcgcac gacacagatt
     2161 cccgcacagt tgatctgggt tacagggaaa ggcagtcaca aggaattcac ccgctacaac
     2221 gcacccggcg tccgcgtgct ggacttcctc gatcccatgg cggacgccta ctcggtagca
     2281 gatctcgtcg tctcgcgggc ggggatgatc accgtggccg agctgtgtgc gtggggtctg
     2341 ccgaacatcc tggtcccgct gccgactgct gccgccgacc accagaccca taatgcgcgt
     2401 gtcctagccg aggccggcgc ttccatcttc cttcctcagt cagacctcac ccccgaccgg
     2461 ctcggtcagc tggtagggga actgctccgc gacccggccc gccgagaaca gatgggtcag
     2521 cgagcgctgg cccgcggtcg acccaattca gctgcggata tagtgtccaa gttattgaca
     2581 ctcgctcggt aaggcgcact ttccgaactt gcggcaccat cttacattag ccgttcaatc
     2641 atggcactgt tcaaccccgc cgataagcgc agtgtgcact tcatgggaat cggcggcgcg
     2701 gggatgagtg ctcttgctct catcgccttg cgccgtgggg ttgccgtgag tggctgcgac
     2761 attgatccct ccggggcagc cgacctggcc agcctgggag tttccatcag gcagggccac
     2821 gacccgtctc atttgaccgg tacgcgggcc gtggtggtca ccgccgccgt gcccgagggg
     2881 catccggaac tggaacatgc ccggcagctg ggcttgccaa tcattccccg gaaggtcgcg
     2941 ctagccgagc tgattgccgg ggcccggtcg atcgcaattt ccgggactca cggcaagacc
     3001 acgactacgg tgatgaccac cgaagcgctg accgccgctg gtctcaatcc gaccggcatt
     3061 gccggtggaa gagtgagcgc ctggggcggc aacgcgcggg tggcgggaga tcagctgttc
     3121 gtggtggaag cagacgagtt cgacaaagcg ttcctcacgc tctatcccga aattgcagtc
     3181 gtcaacaatg tcgagcccga ccacctcgaa tgctacggct cgatgaccgc actcgaagat
     3241 gccttcgtgg agttcgcggg acgcgctcgc gtggccatcg tgagcgccga cgatccgggc
     3301 gctcgccgca tcggcgcccg tctcaagacg tcggtgtgcg gctttggggt cgactctggg
     3361 gcagacatac gaatcagcga tatcgtgcaa cgagccgatg ccaccgaggc ctgtattcgt
     3421 tggcgcagtg ggc
//
LOCUS       DASRPQ010001037         1523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2648322, whole genome shotgun sequence.
ACCESSION   DASRPQ010001037 DASRPQ010000000
VERSION     DASRPQ010001037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2648322"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(914..>1523)
                     /locus_tag="VFD73_11795"
     CDS             complement(914..>1523)
                     /locus_tag="VFD73_11795"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI74675.1"
                     /translation="QAFVEQLRDVLAGAQRDQHLVVFLDEAHIHQDADLGYGWAERGQ
                     RFWVASTSPRLSARVSFDGLYLYNEGQVRLWPYSRANGDHTIAVLRRLRAEFPSEALI
                     VLWDGAPYHRAQAVREAARTLDITLMPLPGYSPDLMPVEELWHWLREDVTYHHCHASA
                     EDLTRRVADFEARLNRDPFVIADRLWVKDCLNPDEEKLRFSK"
BASE COUNT          252 a          518 c          504 g          249 t
ORIGIN      
        1 gttcggatct gccgcaatgc ggatcgaaca gagttgatcc gagctatcat ccttcgctgg
       61 cccgacgtca cgctcgatga gctttggtgg gggatgaggt tagcggctcc aacgccgcag
      121 ggctcgaacc cgcacccctc agcttcgaag ccgcatgctc tgccgctgcc tgccccgctt
      181 agcgccgctt agccggtatc gatccggtcg cctcaggttc gcccggcatg catccggtgc
      241 agatgctgcg catcaccttg ctgtcaatct cccggcttct ccgatcaaga gcctcaagcc
      301 tagcctgagc cgggttcgtc tcggcagctg cgcccgtcgc gcgaccgggt gatgcgccag
      361 tggtcgcgcc tgaggtggtg ggcgaggtca gacccggtga accgctcggg ttctgcccgc
      421 gcgtggctga acctccagag gacggagcag acgggttcgt cccgctcgac cccaggcccg
      481 acgaggtcgg agccgaagga ttggtggtca accctgatcc tggcagagag gacggcactg
      541 ccgaggggtt cggcagtgtt gtggatgagc ttggaccaag cccgccggaa gtcgccgccc
      601 ccgagccgag cccgccggcg gtgccagccg aaccgatgcc accggtcgtg gttgatccgg
      661 cacctgcgga gccagcggcc gaaccgggcc ccccagctga gcctgcggag gctcctgagg
      721 ctccgcccgc cgagccggct ccgcctcctc cccctgctcc tcccccggag cctccgcccg
      781 acgatgccag tgcggggcct gagagcgtaa gggcgaggat cataaaagca gcaacacgca
      841 tcagcttctc cttcccgggt taacgcccct gggttggtgg agttgccagc tcctcaggga
      901 agctaaaccg cgtctatttt gagaagcgca gtttctcctc gtcagggttg agacagtctt
      961 taacccagag gcggtcggcg atgacgaagg ggtctcggtt caggcgcgcc tcgaaatccg
     1021 ccacccgccg ggtcagatcc tctgcgctgg catggcagtg atgataggtg acgtcctcgc
     1081 gcagccagtg ccagagctct tcgaccggca tcagatccgg gctgtagccc ggcagcggca
     1141 tcagggtgat gtccaacgtg cgggcggcct cccggacggc ctgggcccgg tgatagggcg
     1201 caccgtccca gagcacgatc agcgcctcgc tggggaactc agcccgcagc cgacgcagca
     1261 ccgcgatcgt gtggtcgccg ttggcgcgcg agtagggcca cagccgcacc tggccctcgt
     1321 tgtagagata cagcccatcg aacgagaccc gcgccgacag gcgcggcgag gtggaagcga
     1381 cccagaagcg ctgcccgcgc tcggcccagc catagccgag gtccgcgtcc tgatggatgt
     1441 gtgcctcgtc gagaaagaca acgagatgct ggtcgcgttg cgcgccggcc agaacatccc
     1501 ggagctgctc gacaaaggcc tgc
//
LOCUS       DASRPQ010001038         1902 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3576728, whole genome shotgun sequence.
ACCESSION   DASRPQ010001038 DASRPQ010000000
VERSION     DASRPQ010001038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1902)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1902
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3576728"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..295)
                     /locus_tag="VFD73_11800"
     CDS             complement(<1..295)
                     /locus_tag="VFD73_11800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74676.1"
                     /translation="MRIAKLSTAAVVVGLLACGGYSAPTAPSGGNGAYGGGGGGGGGT
                     GGNAGGGTSGGTGAIPLTAAVTVGNDFFKSGRNGTVNAAVDTVAVGGSVTWTWA"
     gene            487..>1902
                     /locus_tag="VFD73_11805"
     CDS             487..>1902
                     /locus_tag="VFD73_11805"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HZI74677.1"
                     /translation="MRDAVSRLRFMLPSLAGAAAIAVLTVVCFRLQLSLATTAFVYLV
                     VIVLVSVRAGLLGSLTVSAIAVLLLHLVFSTPLLRFRVQPDLDLTALAAFAVTAMVVT
                     GQSARARESLREVEAARNELSMAIDSFPVLAWSNLPDGTVDFINRGWLEYTGLTAAEA
                     VAGGWISAVHPEEAARVLAARNAGTASGKPYEIEGRMRRADGEYRWVLRRVVPLYDQA
                     GNVVKWYGTGTDIEDLKRSERALRLSEAYLAEAQRLSHTGSFGWNPLRAELRWSEETF
                     RIFEYRSGEVTPTLELVLERVHPEDVYHVQQVIDQAIRTETDWDLDHRLLMPDCRVKH
                     VHVVAHATRHASGTLEFVGAVMDVTAAKVAQAELQRSEAYLAQAERLSHTGSWALRLG
                     DGYEDHAGEQNYWSEEGYRIFGVDPATDPHPNQTMRKRVHPDDWPSLVDAARRAILDR
                     TEFAADYRAVLPDGSIRYISAV"
BASE COUNT          334 a          603 c          612 g          353 t
ORIGIN      
        1 tcgcccacgt ccaggtcact gagcctccca cggcaaccgt atccaccgcc gcgttaacgg
       61 ttccgttccg tccgctcttg aagaagtcgt tgccgacagt cacggcggca gtcaggggaa
      121 tggcgcctgt gccaccgcta gtcccgcccc ctgcgttgcc tcctgtgcca cccccgcctc
      181 cgcctccgcc gccatatgcg ccgttccccc cagacggcgc agtgggcgcc gaatatccgc
      241 cgcacgccag aagacccaca accactgctg ccgtgctcag cttcgctatt cgcatgtcct
      301 tgctcctgat aagtaggcca gtcaacgaga ccaatcttgg tacttctcag gcgcacggcc
      361 tattccctgt caggggaatc ttgtccctcc ccaaacaggg aaggggaagg gagcgtgggc
      421 tgtgaatgca ctggtgtgga gggggaccgg tcgtataatc caacagcttc ttcttcgagc
      481 gtggtcatgc gcgacgcggt atcgcggctt cggttcatgc tgccatcgct ggcaggtgct
      541 gcggccattg cagtcctgac tgtcgtgtgt ttccgactgc aactgagcct cgccacgacc
      601 gcattcgtgt atctggtcgt catcgtgctg gtctcggtcc gtgctggact gctggggtcc
      661 ttgaccgtct ccgcaatcgc agtgctgctg cttcacctcg tcttcagcac gccgctgctt
      721 cgtttccggg tgcaacctga tctcgacctg acggcgctgg ctgcctttgc ggtgaccgca
      781 atggtggtga cgggacagtc cgcgagagcg cgtgagtccc tgcgtgaggt cgaggctgcc
      841 cgcaatgagc tgagtatggc gatcgacagc tttcccgttc tggcgtggag caatcttccc
      901 gatggaacag tcgacttcat aaaccgcggg tggctggaat acacaggact cacggcagcg
      961 gaggcggtcg ctggaggctg gatcagcgcg gtgcacccag aggaggccgc gcgcgtcctg
     1021 gccgcacgca atgccggcac agccagcggg aagccatacg agatcgaggg gcgaatgcgc
     1081 cgggccgacg gcgagtaccg ctgggtttta cgtcgggtgg tgccgctcta cgaccaggcc
     1141 gggaatgtgg tcaagtggta cggcaccggc accgacatcg aagatctcaa gcggagcgag
     1201 cgtgccctcc ggctgagtga agcctacctg gccgaggcgc agcggctgag tcataccggc
     1261 agcttcggat ggaatccctt acgagcggag ttgcgctggt cggaggagac gtttcgcatc
     1321 ttcgagtacc ggtccggcga ggtaacgcca acgctggagc tggtgctcga gcgagtgcac
     1381 ccagaagacg tctaccacgt tcagcaggtg atcgaccagg ccattcgcac ggaaacggac
     1441 tgggacttgg accaccggct gctgatgccg gactgccggg tgaaacacgt acatgtcgtc
     1501 gcgcatgcaa cccggcatgc ctccggcacg ctcgagttcg tcggtgccgt gatggacgtg
     1561 acggcagcca aggtggcgca agccgaattg cagcgaagcg aggcctacct cgcgcaggcc
     1621 gagcggctga gccacaccgg cagctgggca ttgcggctcg gcgacggcta cgaagaccat
     1681 gccggagagc agaactactg gtcggaggaa ggctatcgca tcttcggcgt ggatccggca
     1741 acggaccctc atccgaacca gaccatgcgg aagcgggttc atcccgacga ctggccttcc
     1801 ctggtggacg cggctcgtcg cgcaatcctg gaccggaccg agtttgcagc agattatcgc
     1861 gccgtgcttc cggacggctc gatccgatac atctcggccg tg
//
LOCUS       DASRPQ010001039         1015 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2945312, whole genome shotgun sequence.
ACCESSION   DASRPQ010001039 DASRPQ010000000
VERSION     DASRPQ010001039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2945312"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            265..744
                     /locus_tag="VFD73_11810"
     CDS             265..744
                     /locus_tag="VFD73_11810"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZI74678.1"
                     /translation="MTESQPGNDFASFPAPAEGILVALFITVRKVARSRDFYSRVLGG
                     TVILDENPCTVRLSNSWIIMNPGGPPTPDKPGISVVDYQPGDTTSIFLNLRVADIQAC
                     YQEWRAKGAEFVTPPIDRGAEIRCYMRDPDGYLIEVGQSTGLLQGHLAAKRPEDLPG"
BASE COUNT          207 a          329 c          322 g          157 t
ORIGIN      
        1 cacggcgctg cggtacttcg cgctggacgg caccgaccat cccagccacc aggagtaggc
       61 cagcatgatc cgccggtaca tcatctggcg cagcaaccac gcctacgacg aacggctccg
      121 ccaaattgtc gaccgggcaa acgtagcctg atgcggcact aggtgcgggg acgtctgcgc
      181 cgaccgcatc gggggaagag ttgatgacta ggaccgccgc tcgggtaagc cgctgtctgc
      241 aaatgccgcc ggagaggagc aaccatgaca gaatctcagc ccggcaacga tttcgccagc
      301 ttccctgcgc ccgccgaggg aattctggtg gcgttgttca tcaccgtccg caaggtcgcg
      361 cgatcgcggg acttctactc gcgcgtcctg ggcggcaccg tcatccttga tgagaacccg
      421 tgcactgtca ggctgtccaa ctcgtggatc atcatgaatc ccggcgggcc gccgaccccc
      481 gacaagccgg gcatctcggt ggtcgactac cagcccggcg acactacctc gatcttcctg
      541 aacctgcggg tcgctgacat ccaggcctgc taccaggagt ggagggcgaa gggggcagag
      601 ttcgtgacgc cgccgatcga ccgcggagcg gagatccgct gctacatgcg ggacccggac
      661 ggatacctga tcgaggtcgg acagtctacc ggcctgctgc agggccatct cgccgcaaag
      721 cgcccggagg atctcccagg ctgacgtatg actcacgagg cgtaccgcat ccgtgccaga
      781 aacggccgat gcgaacagcc ccggaccatg tgctgcaggt tgatccagga cacggacctg
      841 agcgaacatc tgcgaacagc cctaatggtg cctacggatc agaagacggg cgagcggccg
      901 gacagaacgg ttgcagttcg ggttgcagtt caccaccgta cggtgccgtc cagggaggac
      961 cgataaccag cgcggctgcc cagataaggg cggaattcac ccggataagg tacgc
//
LOCUS       DASRPQ010001040         1573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2318731, whole genome shotgun sequence.
ACCESSION   DASRPQ010001040 DASRPQ010000000
VERSION     DASRPQ010001040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2318731"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..284)
                     /locus_tag="VFD73_11815"
     CDS             complement(<1..284)
                     /locus_tag="VFD73_11815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HZI74679.1"
                     /translation="MRFQTLRPASWQSCISCGNEVVETDPHPRCGKCGGLLEVHHRPP
                     EIPAAELVQRFTERRGGAPGATASGVWRFQEIVLPSAEAVVSYPEGNTPLL"
     gene            complement(281..1240)
                     /locus_tag="VFD73_11820"
     CDS             complement(281..1240)
                     /locus_tag="VFD73_11820"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: protein motif:HMM:NF002288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006566 - threonine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HZI74680.1"
                     /translation="MSGRGPAVTAFAPGGVGNMGPGLDILGLALDGAGDTVRAEWSDS
                     AGIEVLDSGHPDLPSDPDQHTAALAARSVIERAGSSFLKSAGVALTVHKGLPLSGGQG
                     GSAASAVAGAFAVNALLGQPLDRRGLLAPCLIAEERVSGRHADNIAPSLLGGIVLIRT
                     LDPPDVIQLPVPPELSVVVVRPDQRLRTADARAVLPLDITRAVALHQAAQVGAIIAAL
                     ACADYELLGRAIDDRIAEPARAVLLPGFQEAKQAALAAGALGCSISGSGPSAFALVRG
                     RAVGLQVGEAMAAAYAACGYRTDVRVAGIDRVGARLLPDGARQ"
     gene            complement(1237..>1573)
                     /locus_tag="VFD73_11825"
     CDS             complement(1237..>1573)
                     /locus_tag="VFD73_11825"
                     /inference="COORDINATES: protein motif:HMM:NF012945.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74681.1"
                     /translation="LVPPWAQALSLDQFLHRLKELDAPWRNRVERAQKHGAVLRYVAV
                     VTARRIAVGVQAVPRTSPFAAIHGSDNQLVFTTSRYQTNPLVITGPGAGAEVTAAGVL
                     NDILRLDRA"
BASE COUNT          290 a          543 c          498 g          242 t
ORIGIN      
        1 agcaggggag tatttccctc ggggtaggag accactgcct cggctgaggg cagcacaatc
       61 tcctgaaatc gccacacgcc cgaggcggtt gctccgggtg ctccgccccg gcgctcggtg
      121 aatcgctgaa cgagctctgc cgcgggtatc tccgggggac ggtggtgcac ctcgagcagc
      181 ccgccgcact tgccacagcg cgggtgcgga tcggtttcca ccacctcgtt gccgcaggag
      241 atgcagctct gccaactggc cggccggagt gtctggaacc tcactgtcta gctccgtcgg
      301 gaagaagtcg agcccccacc cggtcgatcc ccgcaactcg aacatcggtc cgatatccgc
      361 acgcagcata cgcggcggcc atggcctcac caacctggag acccacagcg cgtccccgaa
      421 ccagagcaaa ggcactggga ccacttcccg agatcgagca ccccagtgct cccgccgcaa
      481 gcgccgcctg ctttgcttcc tgaaagcccg gcaacagtac tgcccgtgcc ggctcggcaa
      541 tccggtcgtc gatggcgcgg ccgagcaact cgtaatcggc acaggcgagg gccgcgatga
      601 tcgctccgac ctgggccgct tgatgaagcg ccactgcccg cgtgatatcc agcggtaaaa
      661 ctgcgcgagc gtccgcagtg cggagccgct ggtcgggccg aacgacgacg accgacaact
      721 ccggaggaac cggcagctga atgacgtcgg gcgggtccag cgtccggatg agaacgattc
      781 cacccaacag tgagggagca atgttatcgg cgtgccggcc ggagacccgt tcctccgcga
      841 tcaagcaggg ggcgagcagg ccgcggcgat ccagtggttg tcccagaagg gcattgactg
      901 cgaacgcgcc ggccacggcg gaggcggcac ttccgccctg acctcccgac agcggcagtc
      961 ccttgtgcac cgtgagcgca actcccgcag acttcaggaa cgagctgccg gcgcgctcga
     1021 taaccgaacg ggcagcgagg gccgcggtgt gctgatcagg atcgcttgga agatcgggat
     1081 gacccgaatc cagaacttcg atccccgccg agtcgctcca ttccgcccgc acggtgtctc
     1141 ccgcgccatc cagcgccaaa cccagaatat cgagtcccgg ccccatgttg cctacgccgc
     1201 cgggagcaaa tgccgtgacc gccggacccc gcccgctcac gctcggtcga gcctcagaat
     1261 gtcgttcagc acaccagctg ccgtcacctc ggcgcctgcg ccgggcccgg tgatcaccag
     1321 tggattggtc tggtagcgtg aggtcgtgaa cacgagctga ttgtccgatc cgtgaattgc
     1381 ggcgaatggg ctggtcctgg gtactgcctg aaccccaaca gcgatgcggc gagccgtcac
     1441 cacagcgacg taccggagca ccgctccatg cttttgtgct cgctccaccc ggttgcgcca
     1501 gggggcgtcc agttctttca gccgatgaag aaattgatcc agcgacaagg cctgggccca
     1561 gggcggcacg agg
//
LOCUS       DASRPQ010001041         1567 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3890719, whole genome shotgun sequence.
ACCESSION   DASRPQ010001041 DASRPQ010000000
VERSION     DASRPQ010001041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3890719"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(425..637)
                     /locus_tag="VFD73_11830"
     CDS             complement(425..637)
                     /locus_tag="VFD73_11830"
                     /inference="COORDINATES: protein motif:HMM:NF013828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI74682.1"
                     /translation="MFQVIADRAEKAAVIVTTNLPFSEWSQVIPNPRLCKALIDRLTD
                     QAHIITTGADSYRFRRTSAQRKAAKS"
     gene            complement(1166..>1567)
                     /locus_tag="VFD73_11835"
     CDS             complement(1166..>1567)
                     /locus_tag="VFD73_11835"
                     /inference="COORDINATES: protein motif:HMM:NF013828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI74683.1"
                     /translation="LCVAACRQRRRVRFTTATALVNELAEAAHANQLRRALGRWERLD
                     LICIDELGYVPLAGAACELMFQVIAERAEKAAVIVTTNLPFSEWSQVIPNPRLCKALI
                     DRLTDQAHIITTGTDSYRFRRTSAQRKAAKS"
BASE COUNT          256 a          510 c          467 g          334 t
ORIGIN      
        1 tggctgtgtc catgaatttt ggcccacttg tgctgacgaa ttctggccca ccctccgggg
       61 ttcaatctgc tgagccgggc tgaggccgag ctcatcaggt cagcgtcggt tctctgtcct
      121 ttccatcatg atttggttgc ctgggcgctc gtttcgtacc cggatcacgc gtcgctacat
      181 cgccatattc cgtcacctga cagaattctc cgcatgaccc gggagccacg atattctgtc
      241 actgacggaa gacaattttc gtcagatgac gataatcggc ctgtcggcag cggtgatgtg
      301 ggatcagcca aaggccgggg gcaccgacga ggtgcaccgc ccatggcccg ctccccggcg
      361 ttcgatccgc caatcccggt ctcgcccggg ttcagcactt cagcgccagt tccctgtcct
      421 tttctcatga tttggccgcc ttgcgctgcg ccgaggtgcg gcggaaccga taggagtccg
      481 cccccgtcgt gatgatgtgc gcctgatcgg ttagccgatc gatcaatgcc ttgcacagcc
      541 gtggattggg gatcacctgc gaccattcgg agaatggcag gttggtggtc acgatcaccg
      601 ccgccttctc ggcccggtcg gcgatgacct ggaacatcag ctcgcaggcg gccccggcga
      661 gcgcaagagc atcgagccga tggccgcccg gcttgatccg gcccatgtgc aggccaaaca
      721 ccagtcgctg catcatgtgg ttggctgtgt ccatgaattt tggcccactt gtgctgacga
      781 attctggccc accctccggg gttcaatctg ctgagccggg ccgaggccga gctcatcagg
      841 tcagcgtcgg ttctctgtcc tttccatcat gatttggttg cccgtgcgcc cgttttgtac
      901 ccggatcatg cgtcgctaca tcgccatatt ccgtcacctg acagaattct ccgcgtgatc
      961 cgggagccac gatattctgt cactgacgga cgacaatttc cgtcagatga cgataatcgg
     1021 cctgtcggca gcgctgattt gggatcagtc aaaggccggg tgcaccggcg aggtgcaccg
     1081 cccatggccc actccccggt gttcgatccg ccgctcccgg tctcgcccgg gttcagcact
     1141 tcagcgccag ttccctgtcc ttttctcatg atttggccgc cttgcgctgc gccgaggtgc
     1201 ggcggaaccg ataggagtcg gtccccgtgg tgatgatgtg cgcctgatcg gtcagccgat
     1261 cgatcaatgc cttgcacagc cgcgggttgg ggatcacctg cgaccattcg gagaacggca
     1321 ggttggtggt cacgatcacc gccgccttct cggcccgctc ggcgatgacc tggaacatca
     1381 gctcgcaggc ggccccggcg agcggaacgt aacccaattc gtcgatacag atcagatcga
     1441 gccgctccca tcggcccagc gcgcggcgga gttggttggc atgcgccgcc tcagccaact
     1501 cgttgaccag cgccgttgcg gtggtgaacc gcacccgccg ccgctgccga caggcggcga
     1561 cgcacaa
//
LOCUS       DASRPQ010001042         2151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1064882, whole genome shotgun sequence.
ACCESSION   DASRPQ010001042 DASRPQ010000000
VERSION     DASRPQ010001042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1064882"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1051
                     /locus_tag="VFD73_11840"
     CDS             <1..1051
                     /locus_tag="VFD73_11840"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HZI74684.1"
                     /translation="VEAGYPLSHVMVDDPLSVELDPAQPPWAPQNYDLEFDGPMTLRR
                     ALYLSRNIIAIKLGMEVGEQAVISEAQKFGITTRIPAFPSIHIGSADVIPLEMIAAYT
                     TFANLGTRTVPNGILRIEDRSGKIVWRPPVRTVPVMDTLHAWLMVDALRDVVRHGTAV
                     GSVGARINFPAGGKTGTTNDGNDVWYIGFTPEMVTGVWIGFDQPQKIKANAQGGVLAA
                     PAWTAMMREVYERRSIPAAWSRPAGLTALDVDKTTGYKATPFCPKDVHYIESFIPGTE
                     PTAFCPVHSPFGSMGGVMGGAGPDGAPAPGSVPTPATPPAGNTAPPPAPGGTATSGGT
                     AGVMGGTGPTPNQPH"
     gene            1017..>2151
                     /locus_tag="VFD73_11845"
     CDS             1017..>2151
                     /locus_tag="VFD73_11845"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZI74685.1"
                     /translation="MAPGPRLISRTEVLARRLAARWLIPIEGDPIESGAILIGSDGRV
                     QEVGHDANVSRPEGVPSHSWEDAAILPGFVNTHTHLELTGFADRIQETEFASWIRQLR
                     QLKTTRTAEEYLIAARQGLADCYAAGVTTVADTGDSGAVCLALAEAGGSGLAYQEVFG
                     PHPDQAEQSFAELRARVLELQNRASMRLRIGVSPHAPYTVSGRLFRLVAQWARAENLC
                     MAVHIAESPAERQFLAAGTGPFAEAWRARGIPLPQPLGKTPVDWLAEHGVLSERCLCI
                     HAVQVDSADIERLAQSGAAVAHCPLSNRAHQHGAAPLEQFLKAGIRVGLGTDSVVSVG
                     RLDLLAEARAARHLAPLNAGDLLSLCTLGGARAIGLERETGSLV"
BASE COUNT          396 a          671 c          695 g          389 t
ORIGIN      
        1 cgtcgaggcc gggtaccctc tctctcatgt catggtggac gatccgctga gcgtagaact
       61 ggatccggcc caaccaccat gggcgccgca gaactacgac ctggagttcg atggtccgat
      121 gacgctgcgt cgggcgctgt acctgtcgcg caacatcatc gcgatcaagc tcggcatgga
      181 ggtcggagag caggcagtca tcagtgaggc gcagaagttc gggatcacca ccaggattcc
      241 tgccttcccc tcgattcaca ttggttcggc cgacgtcatc ccgctagaaa tgattgccgc
      301 ctataccacc ttcgccaatc tgggaactcg caccgttcca aacggaattc tgcggatcga
      361 ggatcgcagc ggaaaaatcg tgtggcggcc tccagtgcgc actgttccgg tgatggatac
      421 gcttcacgcc tggctgatgg tggatgcgct gcgagacgta gtgcgccatg gaaccgccgt
      481 gggttcagtt ggagctcgga tcaactttcc cgccggcggg aaaaccggca ctacgaacga
      541 tggcaacgac gtctggtaca ttgggttcac cccggagatg gtaaccgggg tgtggatcgg
      601 cttcgatcaa ccccaaaaga tcaaagccaa cgcgcagggt ggtgttctgg cggcacccgc
      661 atggaccgcc atgatgcgcg aggtctacga gcgccgcagt atccctgccg cctggtcacg
      721 tcctgcgggt ctcaccgcgc tggacgtcga caagacgacc ggctacaagg ccacgccgtt
      781 ctgcccgaag gacgtccatt acatcgaatc tttcataccg ggtacggagc caacggcatt
      841 ttgccccgtg cactcgccgt tcggctcgat gggtggagtg atgggtggtg ccggtcccga
      901 cggggctcct gccccaggct cggtaccaac gcctgcgact ccgccggcgg ggaacacagc
      961 gcctccaccg gctcctggtg gaaccgccac cagcggagga acggcaggcg tcatgggtgg
     1021 caccgggccc acgcctaatc agccgcactg aagtgctggc gcggcgactg gccgcacgct
     1081 ggctgattcc aatcgaaggt gatcccatcg agagcggagc catcctgatt ggctccgacg
     1141 gacgggttca ggaggttggt cacgacgcga acgtgtcccg ccccgaaggc gttccgagcc
     1201 atagctggga agatgccgcc attcttccgg gtttcgtcaa cacccatacc catctcgagc
     1261 tcaccggctt cgccgaccga attcaggaga ccgagtttgc gtcctggatc aggcagctgc
     1321 gccagctgaa gacaacccgg acagccgaag agtacttgat cgcagcccgg cagggcctcg
     1381 cggactgcta tgccgcaggg gtaacgaccg tcgcggatac gggagattcc ggtgcggtat
     1441 gtcttgcgct ggctgaagcc ggtggatcgg gccttgctta ccaggaagtg ttcgggccgc
     1501 accccgatca ggcggagcag agtttcgcag agctccgagc ccgggtgctg gaactgcaga
     1561 atcgggcgag catgcggctt cggatcgggg tctcccccca tgcgccgtac accgtgagcg
     1621 gccgtctctt tcgactggtg gcacagtggg cccgagccga aaacctctgc atggccgtcc
     1681 atattgccga gtcaccagcg gagaggcagt ttcttgccgc cggcacgggc ccgttcgcgg
     1741 aggcgtggcg ggcgcgcgga attcccctgc cgcaaccact cgggaaaaca ccggttgact
     1801 ggctcgctga acacggggtg ctttcggagc gctgcctttg cattcacgcg gtgcaggtcg
     1861 attcggctga catcgagcgt cttgctcagt cgggagcagc agtggcccat tgcccgctgt
     1921 cgaaccgagc gcatcagcac ggagccgcac cgctggagca gtttctgaag gcaggtatcc
     1981 gggtgggact cggtaccgac tcagttgtga gcgtagggcg gctcgacctg ctcgctgagg
     2041 ctcgtgccgc acgacatcta gcgccgctca acgctggaga cctcttgagt ctatgcacgc
     2101 tgggaggcgc gcgagccatt ggcctcgaac gagaaaccgg aagtctggtt c
//
LOCUS       DASRPQ010001043         1432 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3272962, whole genome shotgun sequence.
ACCESSION   DASRPQ010001043 DASRPQ010000000
VERSION     DASRPQ010001043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1432
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3272962"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            193..570
                     /locus_tag="VFD73_11850"
     CDS             193..570
                     /locus_tag="VFD73_11850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74686.1"
                     /translation="MAFNPANHFAVSGAGIDGTIDLSSISGEAMVSLTFDGRELRAPG
                     LEITREGIVVRAIHEEVPDSHTLLVTVIIPQVNLDSEPQMGAGFAVLTTARTSIGGPG
                     LVSGPVQLYELRPLALTASIVES"
     gene            complement(1102..>1432)
                     /locus_tag="VFD73_11855"
     CDS             complement(1102..>1432)
                     /locus_tag="VFD73_11855"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030638 - polyketide metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HZI74687.1"
                     /translation="YVNHDPYNPDQGGGPEGFKQRVGGFRSVLHDFDLRIERQIAEGD
                     WVETHWSLRGIHGGALEGIPPTGKSVYVDGQLLSHIVDGRFVEEWVHWNTLGLLRQIG
                     AVPPSPS"
BASE COUNT          233 a          505 c          430 g          264 t
ORIGIN      
        1 gcttgctgga gcgggaggcg cttatctcgt cgcctccgca gccacgcttg gccgggaggg
       61 cggcgctctg gtcggcttcg ttctatcgtc attcagccac aacgaagcgt ggcgatcttg
      121 ctgggtgtct tgattcagcg acccggggga accagacttt gggtcctgat gagactggcc
      181 acgggagatt caatggcatt caatccggct aaccacttcg ccgtatccgg cgcaggcatc
      241 gacggcacca tcgacctctc cagcatctcg ggggaagcca tggtttccct caccttcgac
      301 ggccgggaac tgcgcgctcc cggtctcgag ataacccgcg agggcatcgt cgtcagggct
      361 attcacgagg aggttccaga cagccacacc ctcttggtca ccgtcatcat tccccaggta
      421 aatctcgact ccgaacccca gatgggcgca ggttttgccg tgctcaccac ggcgcgaaca
      481 tcgatcgggg gccccggcct ggtgtcaggg ccagttcagc tgtatgagct gcgaccgctg
      541 gcgcttaccg cctcgattgt cgagagttaa cggccgggcc ggcaaacgta agtccagtac
      601 cgggggcaat agccggtcct gtcgcagtct gcgacgggaa gttgattgct gatcctggcg
      661 tggcatccgg agcaggtcgg catgcccgtt gtggcgagcg tactcctcat ggctgcctgc
      721 aacgccgaaa ccaccgtggc ccgcgccctg gacggccgct actccgcgcc agcgacgaag
      781 cccacgccct catccgcaag ccctcaccgt ctccggtgac atcatccccg gccccggcga
      841 actgctcatc cgcctcgacc cctcaccgcc cccgcgcacc caggcccggc tgccctctgc
      901 agccggctca cccaagcccg cgcccctacc ccggcaccgg gctcgtcctg agctacaacg
      961 ccaagcccca ccccggcact gcatgattct tctctttgtg ccgggagtcc tggtgtctgc
     1021 gcgccaatac ggcatcgcgg cagaccaggt ccgtcagatc tttcagcggc ggcaacggca
     1081 aggccttcag ccgactcgcg gtcacgatgg ggacgggggt acagcgccga tctgccggag
     1141 caggcccagg gtgttccagt ggacccattc ttcgacgaac ctgccgtcga cgatatggct
     1201 gagcagttgt ccgtccacat agaccgactt gccggtcgga gggatgccct ccagtgcccc
     1261 gccgtggatc ccgcgcagtg accagtgcgt ttccacccaa tcgccctcgg cgatctggcg
     1321 ttcgatccgc aggtcgaagt cgtgcaggac gctgcggaat ccgcccaccc gctgcttgaa
     1381 tccctccggt ccgccgccct ggtcggggtt gtacgggtcg tggttgacat at
//
LOCUS       DASRPQ010001044         1061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3577764, whole genome shotgun sequence.
ACCESSION   DASRPQ010001044 DASRPQ010000000
VERSION     DASRPQ010001044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3577764"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          199 a          370 c          321 g          171 t
ORIGIN      
        1 ctagccaacc gggacatcgc cgcccagctg ttcctgtccc cccgtaccgt cgcctaccac
       61 ctgtacaagg cctatcccaa gctcgggatc tcctcccgcg ccgagctgcc cgccctggtc
      121 tgaggggcca ggcacgcgca cagccgaacg gcaagggcgg cggcccccgt ggccggcacc
      181 gccctcgcca cccggccggg ccgtgccact caggacggcc gccattacca gcgccagcgc
      241 gcagtaactc ggggtttccc cggcgtcgtc ccagtgcggg cagcagctcg gcagccccgg
      301 cggccctatt agcatcaaac tgaggatgtc tggcctccgg ctcatgcaca gcacggtaaa
      361 acagctgctc attaagccga atcagtcacg gatatcagta ttttggtgca ttaaggtacg
      421 gggccacggg tgacgcgcta gcggcactcc gcgccgacga tcccgggccc gcgcagcagg
      481 ccgtcgcgga gatggtcgac cttgcctgcg aaccaggctg ggcggcttcc ctcaggctga
      541 gggtgcgcca cttccggaaa ccaggcagcg gctggattcg cgcgcggcaa tccggaaatc
      601 acaccaatcc cagaagcact cttgaagcgc accaattggt ggggtgcccg gttgtcccgc
      661 cagactcaat caaccccgga ggcgtggaga ggccggccgt ctcaaccgca tcgtgcagcg
      721 acacaccggc agcgttgttg atcatcagcg cacggacacc atggcggtta cttacagttc
      781 cacagctcct cggggctgcc gttggccagg ctcctgagct gcatctttgc tcgaatcctc
      841 cgcagcccta tgtacacatt gttatcctgg cagctcaaaa agcggcaaag cggcacaagt
      901 aagcacgaac tgagggagaa agcttgtcat gtgacgttac ccgccctccc gcgatggtgg
      961 gcaggaggtg accctcacga gctccgcctg ctagccaggc ggtcccggcc aggtgttcgc
     1021 agcacgcggc cgggaccttc gtcggacaac cttaggagga a
//
LOCUS       DASRPQ010001045         1613 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2016057, whole genome shotgun sequence.
ACCESSION   DASRPQ010001045 DASRPQ010000000
VERSION     DASRPQ010001045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2016057"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1182)
                     /locus_tag="VFD73_11860"
     CDS             complement(<1..1182)
                     /locus_tag="VFD73_11860"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HZI74688.1"
                     /translation="MPRGSPTIDVPSDAIRIGPGDPRYRAVVEKRFNKRFSASPDYVR
                     LLGTTDQVISALEDAVRERSRFVVTSGGHCLEGFVSDPEVRVILDVSPMKRIYYDRDM
                     GAIAVEAGATVGETFQQLFDNWKVVVPLGEYPGIGVGGHVAGGAFGFLCRQLGLAADY
                     LAAVEVVTVDQGGKPQRVIARRESADRHHDLWWAHTGGGAGNFGVVTRYWFRAPDASG
                     SDPATLLPRAPESISTFRAEWSWNQIDHKSFVRLLQNHGAWCEANSDADSANASLWTL
                     FEIHRKQFGTLIYRGVSTAGGAAERQWDNHLAALCQGVRRPSGQESARMTWLEFALNP
                     FPDLFAAPPGGVSVKVKDALLKRRLNDSQMEVVYDYLTRTDHDVMGGMFGLATYGGRI
                     NT"
     gene            complement(1216..1464)
                     /locus_tag="VFD73_11865"
     CDS             complement(1216..1464)
                     /locus_tag="VFD73_11865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74689.1"
                     /translation="MDPQMILAPLIPISAIVAFAAVRITRIRAGRPESLSGDVTARLD
                     QLERDYHDLHEQLAETQERLDFAERLLTKARDDRQIGS"
BASE COUNT          288 a          537 c          487 g          301 t
ORIGIN      
        1 cgtattgatc cggccgccat aggtggccaa cccgaacatg ccacccatca cgtcgtgatc
       61 ggtacgggtc aggtagtcgt agaccacctc catctggcta tcgttcaacc gtcgcttcag
      121 gagggcatcc ttcaccttca cactgacgcc gcccggtggc gccgcgaaca gatcggggaa
      181 tggattcagg gcgaattcga gccaggtcat ccgcgccgat tcctgtcccg aaggccggcg
      241 tactccctgg cacagcgcgg cgagatgatt gtcccactgg cgttcggccg ctcctcccgc
      301 cgtgctcacc ccccggtaaa tgagggtgcc gaactgcttc cgatggatct cgaacaaagt
      361 ccagagtgac gcattggcgg agtccgcgtc gctgttggcc tcgcaccagg ccccgtggtt
      421 ttggagcaat cgaacgaatg acttgtgatc gatctggttc cagctccact ccgcccggaa
      481 cgtgctaatc gactccggcg cccggggcag gagcgttgcc ggatcgcttc ctgatgcatc
      541 cggagcccgg aaccagtagc gggtgaccac cccgaagttg ccggcgcctc cgccggtatg
      601 agcccaccag agatcgtgat gccgatccgc gctctcccgc cgcgcgatta ccctctgagg
      661 cttgccgccc tgatcgacgg tgaccacctc gaccgcggcc aggtagtccg ccgccaggcc
      721 gagctgccgg cacagaaagc cgaaggctcc gccggccaca tggccgccca ctccgatgcc
      781 gggatactct cccagcggga cgacgacctt ccagttgtcg aacaactgct ggaacgtctc
      841 gcccaccgtg gctcccgctt ccaccgcaat cgctcccatg tctcggtcat agtaaatccg
      901 cttcatcggc gagacatcga ggatcacccg cacctcggga tcggagacga agccttccag
      961 gcagtgccca ccgctggtca ccacgaagcg gctccgctcg cgcaccgcgt cctcgagcgc
     1021 ggagatgacc tgatcggttg tgccgagcag ccgcacataa tcgggactgg cgctgaagcg
     1081 cttgttgaac cgcttttcga cgaccgcgcg atatcgcggg tcgcccggac cgatccgaat
     1141 agcgtcgctc ggcacgtcga tggtgggtga gcctctcggc atcatcttct ccggatggac
     1201 ctggccgcga ctggcctagc ttccgatctg ccgatcgtct cgcgctttgg tgagcagccg
     1261 ctcggcaaag tcgagccgct cctgtgtttc ggcgagctgt tcatggaggt cgtggtaatc
     1321 tcgttccagt tggtcgagcc gagcggtaac atcgccggag agtgattccg gacgaccggc
     1381 acggattcgc gtgatcctga ccgccgcgaa ggccacgatg gcggagatgg gaatgagtgg
     1441 ggcaagaatc atctggggat ccatcgggtc tccttcagcc aaactgtagg gtcaggagct
     1501 gacccggcgc gagcagccgc agatgagccg agagactggc ttcggcaaac gctgcctcta
     1561 tttctcttct cgattccgaa aagtgtgccc agccttcgat atgcagcggt acg
//
LOCUS       DASRPQ010001046         2115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1698474, whole genome shotgun sequence.
ACCESSION   DASRPQ010001046 DASRPQ010000000
VERSION     DASRPQ010001046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1698474"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(55..249)
                     /locus_tag="VFD73_11870"
     CDS             complement(55..249)
                     /locus_tag="VFD73_11870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74690.1"
                     /translation="MIRPQVRPAGVRGGIELVEHDCVRFGVVYVCAESQVQPGAAWPP
                     LCGCFGSPEPQLGEDLNGLG"
BASE COUNT          428 a          681 c          653 g          353 t
ORIGIN      
        1 gcccggcgcg cccgcgccgt cccacccctt ggcggcgggc acgattcaag cggctcatcc
       61 aagcccattc aggtcctcgc ccagctgcgg ttccggcgac ccgaaacagc cgcacagcgg
      121 cggccatgcc gcgccaggct ggacttgcga ctcggcgcac acatagacca cgccgaaccg
      181 gacgcagtca tgctcgacca actcgatccc gccacggaca ccggctggcc tcacctgcgg
      241 gcggatcatc atgtctcccg atggtgtcaa ggtagcaagg gccggaaggt gcaagaatcc
      301 aggtcaggct caggtccggg gatggcccgc tgagtgtacg tgcccgcccc tccagcatca
      361 agcatgactg tgaccgcagg acaacgagta caggtgaagg tggctggtca gcgtacacgc
      421 gaagtcacgc ttgacaccgg agcctctacg gacactccgg acttggacca agggccaggc
      481 agcagcctgc ccggaccgga cgcgggccat cccctgcaag gtgcagcagt cattctctca
      541 gaggatcgat gccgtgcccg ctgcgtgccc gatcgagcag cggaacaggg tcattaacgg
      601 tcactcacgg atacagggcc ataccgcttg acctgcatcg cagctaaccg gcgtccccgg
      661 acccgaagcc ttccaagctg ggactactgc gcatgcttgg aaggacgggg atcagcacca
      721 gggcgccgtg actgttgcca acactgttgc caagccgctg gacaaggcac ctcccgtgcg
      781 gacagctgtg gaatgtccgt ccagcacacg gaccgcaacg gacgatcctg gacgatgcgc
      841 ccattcctac ggatctgaag gttcgaggat ggccgccttc gaaccagccg cgttacgctt
      901 tccctgcatt gattgtcccc acaaggaggc gtcgaggatg gcagggccgg aagccgaagt
      961 ggcagcagcc gcggccgacc gcggccatct gcgcaagtgg aagtgctacc tgggtcggca
     1021 tgactacgtt caggatcgat gggatcgtcc gcgcggcggc ccgccgccca cgacggaaac
     1081 gtgcccgcgc tgcggcaaaa aacgcgatcg agacgccctg atgccaggtg ccccctggat
     1141 cagcggtccc tagaggccag catccgcgcg accaggccct cggtgtcggc gttgctgatg
     1201 ccctgcaagc gaaggcgggc agtcgtcacc ccgtggcccg cagtccggac gacgcatgtc
     1261 cccgagatgt ccccgaactg ccatcaacag ccaacgatcg ccgacagcta cacccgctga
     1321 acctgaagga aacgagggct ttgagcccgc gagcaacgct tgggaacacg ctcgtaatgc
     1381 gtaggtcatc ggttcgattc cgataggcgg ctcggcacat atgtgcagtt cagacccgca
     1441 ttttcaggcg gtctggcgtg atcacggacc gcaatcgtgg aacgactgaa ccgttccacg
     1501 aacgcgacac attgcaacat atgatccccg atgacagtta cgtgggctga tcgttctgga
     1561 tcggcagccg ttccggccgt gcgggctggc caggcgtctc accgatgcag ccgcctgccg
     1621 cgccgagtca gcagcgagga tcagcgggac agcgcacggg gccacgctcg tgatcaacgc
     1681 tggtctcgag cggcacgcac ggccgatagg cgggaaacct agccaaggta tccatccggc
     1741 gacataccaa accggttgat ctatatggcg ctacgcatac ggcccggttc gccgacgccc
     1801 ggatctggtt gatatgcctg tgatcgtgag gcaccaggat cgaggcgcac cgtgcctcga
     1861 tcacgggcat gatcagtcat tatgccgccg aagggtagtg atctgatttt gatcaccggc
     1921 ataatgccga tgagaggaag tctcgccttg tcttggggtc catcatcgtt caccaggtga
     1981 cctctctacg ggaacgatag gctggctcat ctcagatact gggcatgtaa agggctagcc
     2041 tgtcagaatc tagcctgtag cgtggcctga aaggaggatg ctatgtggca cccgtttcca
     2101 ggaccaagat tcttt
//
LOCUS       DASRPQ010001047         1356 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1380315, whole genome shotgun sequence.
ACCESSION   DASRPQ010001047 DASRPQ010000000
VERSION     DASRPQ010001047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1380315"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            470..>1356
                     /locus_tag="VFD73_11875"
     CDS             470..>1356
                     /locus_tag="VFD73_11875"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZI74691.1"
                     /translation="MYKPMVKAPGGQRESEGVVVPLIGVQHNAPGGKDPCFDHAGGEG
                     KREGMAGTARSNHPGGREPVVLPWVSTVKVRELQCKLWAAAKQSPERRFHALYDRIHR
                     GDVLWEAWERVRKNRGAAGVDRVTLAYVEEVYGVPRLLGELQADLRAGTYRPAPARRV
                     DIPKPDGGKRPLGIPSVRDRVAQQAAKLVLEPVFEADFVPCSYGFRPKRSATQAMERL
                     RTGFIAGYQFVAEFDIRNFFGEISHDQLLAEMGKRISDRRVLKLVRLWLQAGVMTEMG
                     LERTVAGTPQGGVISPLLA"
BASE COUNT          218 a          378 c          514 g          246 t
ORIGIN      
        1 cttgctggcc ggcggcgtag ggccgctcgg aggtgccgcc gcgatatcgt tgctataatt
       61 tgagtgtgca ctaagttttg agtgtagtca atatttgcta tgctgggcac atgttgcgtc
      121 ctgaaagctg gtccaggctt acaggtggaa gtcctgtccg ggtaggcacc ggagcgcccg
      181 gtagcaggcc ccggttcgtc gttgagaggc ggcgggctga gcggggtgtc aagagcctct
      241 ttggagggag caagcgtacg ggccgtagcg tgaagcgaac cttgcagcct cgtcacagtc
      301 acaacggagg agccgagccg ctcatgtcac ggcgaaggcc atgtctggca ggccctggtc
      361 cggggtcagc ctgccgggtc ctcccggggt atggggggcg gcacgtgcgc acagtctggg
      421 ctggaacagg agaggcccgt ctgcctggcc tgcgtcgggc gaagaccagg tgtataagcc
      481 gatggtgaaa gcacctggag ggcagcggga gtccgagggg gtcgtagtac cgctgatcgg
      541 cgtgcagcat aacgcgccgg gagggaagga cccctgcttt gatcacgctg gcggagaggg
      601 taagcgcgag ggcatggccg ggactgcccg gtccaaccac cccggcgggc gtgagcctgt
      661 cgtgctgccg tgggtgtcca cggtgaaagt gcgagaactt caatgcaagc tatgggctgc
      721 ggccaagcag tctccggagc ggcgtttcca cgccctgtat gaccgtatcc accggggtga
      781 cgtcctgtgg gaggcgtggg agcgggtccg gaagaaccga ggggctgccg gggtggatcg
      841 ggtcaccttg gcgtatgtgg aggaggtcta cggggttccc cggcttctgg gggagcttca
      901 ggctgatctc cgcgcaggca cttaccgtcc cgcgcccgcc aggcgcgtgg acatcccgaa
      961 accagatggc ggcaagcggc cgctcggcat tccttccgtg cgtgacaggg tggcccagca
     1021 ggcggccaag ctcgtgctgg agccggtctt cgaggcggac ttcgtgccgt gctcgtatgg
     1081 gttccggccg aagcggtcgg ccacgcaggc gatggaacgg cttcgtaccg ggttcatcgc
     1141 cgggtaccag ttcgtcgcgg agttcgacat ccggaacttc ttcggcgaga tcagccatga
     1201 ccagctgctc gccgagatgg ggaagcggat ctcggaccgg cgggtgctga agctggtccg
     1261 tctgtggctg caagcgggtg tgatgacgga gatgggtctt gagcggacgg tcgccgggac
     1321 tcctcagggc ggggtcattt ccccgctgct ggccaa
//
LOCUS       DASRPQ010001048         1770 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4198967, whole genome shotgun sequence.
ACCESSION   DASRPQ010001048 DASRPQ010000000
VERSION     DASRPQ010001048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4198967"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(230..1045)
                     /locus_tag="VFD73_11880"
     CDS             complement(230..1045)
                     /locus_tag="VFD73_11880"
                     /inference="COORDINATES: protein motif:HMM:TIGR01475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HZI74692.1"
                     /translation="MSLRPPDRLTAGPPPREAQTFSGDSLFTRYVNFVKLPHTLFALP
                     FALLGVLAASRVESVSTRTVLLVVIAFSSARWAAMGFNRIADREYDARNPRTQNRELP
                     QARLTLTQAWISVLLAAAVFIASASLLNPICLLLSPLALGWILLYSISKRFTWWPHLW
                     LGLSLAIAPVGGYLAVTGRWSEPAWVLFAVTLAVATWVAGFDIFYALPDAGFDNAEGL
                     RSAVVRLGESRAIVLAKLLHGITIPALALFGYGAGFGAWYYAGLIVATGILAY"
     gene            complement(1042..>1770)
                     /locus_tag="VFD73_11885"
     CDS             complement(1042..>1770)
                     /locus_tag="VFD73_11885"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase domain-containing
                     protein"
                     /protein_id="HZI74693.1"
                     /translation="VLEGYIDPAEPLVLEGPFGDHTGFYSLADYYPQVHVTAVTSRRE
                     PIYPATLVGRPPMEDFYLGHATERIFLPLLKLTVPEIVDYHMPAPGIFHNLVFVSIDK
                     QYPGQAYKVMNALWGQGLMSLAKVLVIVDKDVNVSDSDEAWWIALNNIDPERDVRFTM
                     GPVDVLDHSSRAFTFGSKMGIDGTRKWKEEGFTREWPERITMDAATMKRVDEMWARLG
                     ITLADGRTARRANSTADSSRRRKQ"
BASE COUNT          369 a          567 c          535 g          299 t
ORIGIN      
        1 gtggtcgcca agcttcccct tcaagaggga cccaccggtc gtcagatgcg cggcgccggc
       61 acccttaaat ttcctcggct ttcgccgctt accgctcact gcacaccact cacggtttca
      121 tcaacctgtc caagagccca aagcaaaaaa caaccaccga catcactcca ttcatcgtaa
      181 agaacgcggc gtccagccgg ctgagatcgc ctggtctcac cagatgatgt tagtacgcca
      241 ggattccggt cgcaacaatc agcccggcgt agtaccaggc accgaagccc gcgccatagc
      301 cgaacagagc cagcgcaggg atggtgatcc cgtgaagcag cttggccagc acgatggccc
      361 gggactcgcc caatcggacc acggcactcc tcaagccctc ggcgttgtcg aaccccgcat
      421 cgggcaacgc atagaagatg tcaaaccctg ccacccaggt cgcaaccgcc agggtgacgg
      481 caaacaacac ccaggccggc tcgctccaac gtccggtaac ggcgagatac ccacccaccg
      541 gtgcgatcgc caaactcaga cccagccaga gatgaggcca ccaagtgaag cgtttggaaa
      601 tgctgtagag aagaatccag cccagcgcca gtggactgag cagcaaacag attggattca
      661 gcagcgatgc cgaggcgatg aatacggcag ccgccaggag caccgagatc caggcctggg
      721 tcagcgtcag ccttgcctgg ggtagctcac ggttctgggt gcgaggattg cgggcatcgt
      781 actcccgatc ggcaatccgg ttgaatccca tcgctgccca ccgggcggaa gagaaggcga
      841 tcacgaccag gaggacggtc cgggtggaga cggactcgac tctggacgcc gcgagcacgc
      901 ccagcagcgc gaacggcagc gcgaacaagg tgtgcggcag cttgacgaag ttgacgtatc
      961 gggtgaacag cgagtcgcca gagaacgtct gggcctctcg tgggggcgga ccggcggtca
     1021 gccggtcagg cggtcgcaga ctcactgctt cctccgtcgg gatgagtctg cagtactgtt
     1081 cgcccgtcgg gcggtccgac catccgccag tgttattccc agcctcgccc acatctcgtc
     1141 cactcgcttc atggtggctg catccatggt gatccgctcg ggccactcgc gggtgaaccc
     1201 ctcttccttc cactttctgg tcccgtcgat acccatcttg ctgccgaagg tgaacgcccg
     1261 actcgagtga tcgaggacat ccaccggccc catggtgaag cgaacatccc gctccgggtc
     1321 gatgttgttg agcgcgatcc accaggcctc gtcggaatcg ctgacattca cgtccttgtc
     1381 gacgatcacg agcaccttgg cgagcgacat gagtccctgt ccccagagcg cattcatgac
     1441 cttgtacgcc tgccccggat actgcttgtc gatggacacg aacaccaggt tgtggaagat
     1501 gccgggggcg ggcatgtggt agtcgacgat ctcgggcacc gtgagcttga gcagcggaag
     1561 aaagatgcgc tcggtcgcgt ggcccagata gaagtcttcc atcggagggc ggccgaccag
     1621 ggtcgccgga tagatcggct cgcgtcgaga ggtgactgcg gtaacgtgca cctggggata
     1681 gtagtcggcc agtgagtaga atccggtgtg gtcgccgaac gggccctcca gcaccagcgg
     1741 ttcggcggga tcgatgtatc cctccagcac
//
LOCUS       DASRPQ010001049         1123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2016433, whole genome shotgun sequence.
ACCESSION   DASRPQ010001049 DASRPQ010000000
VERSION     DASRPQ010001049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2016433"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            305..823
                     /locus_tag="VFD73_11890"
     CDS             305..823
                     /locus_tag="VFD73_11890"
                     /inference="COORDINATES: protein motif:HMM:NF015648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HZI74694.1"
                     /translation="MNRYLLPHERSYITVRIHPAIMARPLILFSGLVSGGLVAARKRT
                     SRPVRPEMVGGACLPVLLYFLYRVAARQATYFTVTDKRMILVSGLVVRKVAMMPLTKV
                     TDMSFQRSAMGRVFGYGEFIVESAGRDQALRSVKFVPYPEQLYLEVCGLLFPDAEAET
                     QQDQDHLPDSHC"
BASE COUNT          213 a          341 c          367 g          202 t
ORIGIN      
        1 tgggcatgag ctcgagctga ctgccatagg cggtggcgtt ggctgagact accctggtag
       61 aaacggtcgg cgaaggccgg cgaaggtact gtccgagcta cggatgccgc gtgatgccgg
      121 ccagttcgca gcgcggacaa gagccgggcg gctgcggcca cgagaagcgc gcgacgaggg
      181 gggaggcgag attgtcgcgc tggctaggat cttgatggct acatgtcatg gcttccagtg
      241 tccctacgag cccgcgggag catgaatgag acgggtaatc ccagcggcga ccgcgccagc
      301 ggcagtgaac cggtacctgc tgccgcatga acgctcctac attaccgtcc gcatacatcc
      361 agcgatcatg gccaggccgc tcatcctgtt ctccggcctg gtctccggcg gtctagtggc
      421 ggccagaaaa cgaaccagcc gccctgtgcg cccggagatg gtcgggggag cgtgtctgcc
      481 cgtcctgctg tacttcctgt atcgggtggc agcccggcag gcgacgtact tcaccgtgac
      541 agacaagcgg atgatcctgg tcagcgggct tgtggtgcgc aaggtggcga tgatgccgct
      601 gaccaaggtg accgacatga gcttccagcg ttcggccatg ggccgcgtct tcggctacgg
      661 cgagttcatc gtcgagtccg ccggccggga ccaagcgctg cgcagtgtta agttcgttcc
      721 gtatccggag cagctctatc tggaggtctg cggccttctc ttcccggacg cggaggccga
      781 gacccagcag gatcaagacc acttgccaga ttcacactgt tgagtcgtca agttgcttgc
      841 gcggagaatg ccaggccctg tgcgtcggcc atgcgacgtg atcatgtcca atgcgtgccc
      901 caatgccgct tgccactgaa gttcatgcag gccactgtca tcccggtgca agcaagagcc
      961 gtcgcagcat aagcgctggc cgcctgccgt atccgcagtg cggtgatgac tgaccaccaa
     1021 gctgaccaca acaaggaccg acgcgagccg accctggccg gcgagctatg gatggaaacc
     1081 ccaagtaagc gacggtatcc gacaacctgc atgtatttgc aag
//
LOCUS       DASRPQ010001050         1359 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4199552, whole genome shotgun sequence.
ACCESSION   DASRPQ010001050 DASRPQ010000000
VERSION     DASRPQ010001050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1359)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1359)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1359
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4199552"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..688)
                     /locus_tag="VFD73_11895"
     CDS             complement(<1..688)
                     /locus_tag="VFD73_11895"
                     /inference="COORDINATES: protein motif:HMM:NF012377.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase family glycosylhydrolase"
                     /protein_id="HZI74695.1"
                     /translation="MATEFVTVRGSRFRLGDRDFPVAGSNCYYLGYCPPEIPQMAESV
                     LDTARDMSLNVMRIWAFLEPGAPPGPRDSMPWGGYFQLHDGEKIRPNESPDGLPRLDR
                     AVGLAAERGIKLILVLSNSLPDFGGMDQYNRWLSPGETALFHDDFYQREDLCQAFEAW
                     MRYLVLRTNPLTGRLYRDEPAILAWELANEPRCQSHKGLPARGDCVSSKRILNWVRRM
                     SKALRSVDPNH"
     gene            complement(738..>1359)
                     /locus_tag="VFD73_11900"
     CDS             complement(738..>1359)
                     /locus_tag="VFD73_11900"
                     /inference="COORDINATES: protein motif:HMM:NF015430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Vms1/Ankzf1 family peptidyl-tRNA hydrolase"
                     /protein_id="HZI74696.1"
                     /translation="WSQARYQRRVGNAHQQHVKEVIERLQEIVRKEGIERVVVAGDPV
                     IVPLIEQEMPQELAAMIETMKLDVHASEQDVFKATLEKLQQEESSAAAEKVKRLFEDA
                     RGRGLAVLGPEETLEALANGQVDELLITGAMEQRHPEEEEVDAILAPEIPDSSGGTDS
                     EEPRRASVPDLLITKAKQTSATVTFIEDASLLEPVDGVGAFLRWRA"
BASE COUNT          233 a          462 c          400 g          264 t
ORIGIN      
        1 ggtggtttgg atccacgctg cggagtgcct tgctcatccg ccgcacccag ttcaggatgc
       61 gcttggaaga gacgcaatcg ccacgggcgg ggagtccttt gtgagattgg cagcgcggtt
      121 cgttggccag ctcccacgcc agaatcgcgg gctcgtcacg atagagcctc cccgtcaagg
      181 gattcgtacg tagcaccagg tagcgcatcc aggcttcgaa tgcctggcac agatcctccc
      241 gctggtagaa gtcgtcatgg aatagcgcag tctcgcccgg cgacaaccac cggttgtatt
      301 ggtccatgcc gccgaaatcc ggcaggctgt tgctcaagac caggatgagc ttgatgccgc
      361 gctccgccgc caggcccacg gcacggtcca gccggggcag cccgtccggc gattcgttcg
      421 gtctgatctt ttctccgtca tgcaattgaa agtagccgcc ccacggcatc gagtcgcgcg
      481 ggccgggtgg cgcgccgggc tccagaaagg cccagatccg catcacgttc agagacatgt
      541 cccgggcggt gtccaggacc gattccgcca tttgcggaat ctcgggcggg caatagccga
      601 ggtaatagca gttgctgccg gcgaccggga agtcccggtc tcccagacgg aagcgagatc
      661 cgcgaaccgt aacgaattcc gtagccatcc aggctacgtt agcagacgcg tactgaatcg
      721 gggcacagcg ggttcagtca agctcgccag cgtaagaaag ctccaacgcc atccacgggt
      781 tccagcaggc tcgcgtcttc gatgaaggtc accgtggccg acgtctgctt cgccttggtg
      841 atcagcagat cgggcacgga agcccgccgc ggttcctcgc tgtcggtgcc gccgctcgaa
      901 tccggaatct ccggcgcaag aatggcgtca acctcctctt cttccggatg gcgctgctcc
      961 atcgcccccg tgatcagcag ctcgtccacc tggccattgg cgagtgcttc caacgtctcc
     1021 tccggaccca gaaccgcgag gccgcggccg cgagcatctt caaacagccg tttgaccttc
     1081 tccgccgcgg ccgagctttc ttcctgctgg agcttctcca gtgtggcctt gaaaacgtcc
     1141 tgctcggagg cgtgcacgtc cagtttcatg gtctcgatca tcgccgccag ttcctgcggc
     1201 atttcctgct cgatcagcgg cacgatcacg gggtcgcccg ccaccaccac ccgctcgatt
     1261 ccctccttgc gcacgatctc ctgcagccgc tcgatcacct ctttcacatg ctgctgatgc
     1321 gcgtttccca cccggcgctg gtagcgggcc tgcgaccat
//
LOCUS       DASRPQ010001051         2435 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2946623, whole genome shotgun sequence.
ACCESSION   DASRPQ010001051 DASRPQ010000000
VERSION     DASRPQ010001051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2946623"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..312
                     /locus_tag="VFD73_11905"
     CDS             <1..312
                     /locus_tag="VFD73_11905"
                     /inference="COORDINATES: protein motif:HMM:NF020683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose oxidase early set domain-containing
                     protein"
                     /protein_id="HZI74697.1"
                     /translation="PYLFKGARPTITSVPASVTWGATFPVSTPNAAQVTEVRWIRVGS
                     VTHAFDQSARANTLVFTRTPTGVNVTAPPDGNAAPPGYYLLFILNRNGVPSEGQFIKI
                     G"
     gene            complement(320..1336)
                     /locus_tag="VFD73_11910"
     CDS             complement(320..1336)
                     /locus_tag="VFD73_11910"
                     /inference="COORDINATES: protein motif:HMM:NF005495.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZI74698.1"
                     /translation="MAIKLKKLDEQVIVITGATSGIGLATAKRAAQRGARVVLCSRNE
                     TELQETEATIREAGGTARSVVADVSNPADMEALAATAIEEFGSLDTWVNNAGVSFYGR
                     LTEVAIEDMRRLFEVNFWGTVYGSRAAVARLRGSGGALINLGSIVSDRAIPLQGTYSA
                     SKQAIKGFTDALRMELEEEGAPVSVTLIKPSAIDTPYFQHAKNYMDVQPKPPAPVYAP
                     EVVANAILRAAEHPVRDITIGGGGRLLTAMGAALPRLTDFYMERSMFSSQRSDAPATT
                     SSGNLYQPAGGENSESGGYQGHVLRSSVYTQVALSPARALFAAGLGLAVYAGIRSLAN
                     SGRE"
     gene            1520..>2435
                     /locus_tag="VFD73_11915"
     CDS             1520..>2435
                     /locus_tag="VFD73_11915"
                     /inference="COORDINATES: protein motif:HMM:NF039894.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF512 domain-containing protein"
                     /protein_id="HZI74699.1"
                     /translation="MIRVSAVHPTSIAAELGLREGTELLSVNGRLLDDFLDWEFLTAD
                     EEFVLHVRQPDGEEIEYDIERPLGEPMGVSLDPPRIRRCANRCDFCFVDGLPAGLRDV
                     LYIRDDDYRLSFRYGNFATLTNLKPHDVQRIIEYRLSPLYVSVHATDPTIRRYLLRNP
                     TAPEILPQLQGFAEHGIEFHTQIVMSPGVNDGPVLRQTLSDLYDFGSSILSCSVVPVG
                     LTEFSKHHLVREPTAEECRAAVALVEEHAQRCRRERGMSWAFGADELYLRASLDLPPA
                     ELYDGFDQVENGVGAVRWLQQRIESASLS"
BASE COUNT          458 a          778 c          726 g          473 t
ORIGIN      
        1 ccgtacctct tcaaaggggc acggcctacg attacgtccg ttccggcctc agttacgtgg
       61 ggtgcaacct tcccagtcag cactcctaat gcggcccagg ttaccgaggt gcgctggatc
      121 cgggtgggct cggttaccca cgccttcgat cagagcgctc gggccaacac cctcgtgttc
      181 acccgcacgc ctaccggcgt caacgtcacg gcacctccgg acggaaatgc agcgccgcca
      241 ggttattacc tgctcttcat tctgaaccga aacggagtgc cctccgaggg tcagttcatc
      301 aagatcggct gagccccgat cattcgcgtc cggaattcgc aagggagcga attccggcgt
      361 agaccgccag ccccaggccc gccgcgaaga gcgcgcgggc cggggacaag gcgacctggg
      421 tatagacgct ggaccgcagt acgtgaccct ggtaaccacc gctctccgag ttctccccgc
      481 ctgcaggctg gtacagattc cctgagctcg tcgtcgcggg cgcgtccgat cgttgggacg
      541 agaacatcga ccgctccatg tagaagtcgg tcaaccgggg cagggcagct cccatcgccg
      601 tgagcagacg gccacctccg ccaatcgtga tgtcacgcac cggatgttcg gctgcccgga
      661 ggatcgcgtt cgcgacgacc tccggtgcat agaccggagc ggggggcttc ggctggacgt
      721 ccatgtagtt cttggcgtgc tggaaatacg gcgtatctat ggccgacggc ttgatgagag
      781 tgaccgatac cggcgctccc tcttcctcga gctccattcg gagagcgtcg gtaaagcctt
      841 tgattgcctg cttcgatgcc gagtaggtgc cctgcagggg aattgcccgg tcggaaacga
      901 tgctgcccag attgatcagg gcgccgccac taccgcgcag ccgggccacg gcggcgcgag
      961 agccatacac cgttccccaa aagttcacct cgaacagccg gcgcatgtcc tcgatcgcca
     1021 cctccgtcag ccggccgtag aacgacactc ccgcattgtt gacccaggta tcgagcgagc
     1081 cgaactcctc gatcgcagtg gccgccaggg cctccatatc agcaggattg gaaacatcgg
     1141 caacgaccga cctcgcggtt ccaccggcct cccggatggt agcttccgtc tcctggagct
     1201 ccgtttcgtt acgggaacag agcaccacac gcgctccccg ctgggcggct cgcttggccg
     1261 tcgccaggcc gatgccgctg gttgctccgg tgataacgat gacctgctcg tcgagcttct
     1321 tcagcttgat tgccatgctg cctcctggac ggtggccggc gtttccttgc gaacagtagg
     1381 gagacactca gcagaatgcc aatccttggt gggcccgcgt attccaacag aaagcatggc
     1441 gagagcaacc gcttgaatct ggatcgccaa gggtggatct ttaacggctt tgccagttgg
     1501 ctctcttctt agacatcata tgatccgggt ctccgcggta catccaacct ccattgcagc
     1561 tgagctcggc ctccgggaag gaaccgagct cctctccgtc aacggtcgat tgctggacga
     1621 ttttctggac tgggaattcc tcaccgcgga tgaggagttc gtactgcacg tacggcaacc
     1681 cgatggagag gagatcgagt acgatatcga acgcccgctg ggcgagccga tgggggtgag
     1741 cctcgacccg cctcggatca gacggtgcgc caaccgatgc gatttctgct tcgtcgatgg
     1801 acttccggcg ggattgcggg atgtcttgta catcagggat gatgattacc ggctgtcgtt
     1861 ccgctacggc aatttcgcca cgctgaccaa cctgaagccg cacgacgtac aacggatcat
     1921 cgagtaccgg ctgtctccct tatatgtgtc ggtccacgcg accgacccaa ccatccgacg
     1981 gtacctcctc aggaatccaa cggctccgga aatcttgccg caactgcagg ggtttgccga
     2041 acacgggatc gaattccaca ctcagatcgt gatgtcacca ggagtcaacg acggccccgt
     2101 cctgcgacag acgctctctg acctgtacga cttcggctcc tccattctga gttgctccgt
     2161 cgtgccggtg ggattaaccg aattttccaa gcatcacctg gtccgcgaac ccaccgccga
     2221 ggaatgtcgg gcagccgtgg cgctggtgga ggaacacgcc cagcggtgtc gacgagagag
     2281 aggaatgtcc tgggcattcg gcgccgacga gctctatctg agggcgagct tggatctgcc
     2341 cccagccgag ctctatgatg gcttcgatca ggtggagaac ggggtcgggg cagtgcgctg
     2401 gctccagcaa cggatagaga gcgcctctct ctctc
//
LOCUS       DASRPQ010001052         1936 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4526571, whole genome shotgun sequence.
ACCESSION   DASRPQ010001052 DASRPQ010000000
VERSION     DASRPQ010001052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1936
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4526571"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1936)
                     /locus_tag="VFD73_11920"
     CDS             complement(<1..>1936)
                     /locus_tag="VFD73_11920"
                     /inference="COORDINATES: protein motif:HMM:NF012873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="condensation domain-containing protein"
                     /protein_id="HZI74700.1"
                     /translation="DNFFNLGGHSLLAMRVVNAIRVRFKAEIVVRDVFAHPILKDLGL
                     AVRGAEESRQELIPKVKHGGLLVPLSYAQQRLWFLSQTEGGSRAYHVPFGVELRGSVD
                     VEALCRALDRIVERHEALRTTFEQVEGEPRQRVREAEPFRLVQEDVRECADPKLAVRE
                     RAEVEVSEAFDLEHGPVIRGRLVRHGEEEYTLLVTIHHIASDGWSMGIFLRELSELYG
                     AFCRGEADPLAGLPVQYADYAVWQRSEAAAGKLEKQAKYWERALEGAPTVLELPMDRP
                     RPAQQEYAGGAVRIELDAELTKGLKRLSQRAGTTLFMTVLGGWMAVLGRLARQEDVVV
                     GTPVSNRGHEQIEGLIGFFVNALALRVEVRGELRVRELLERVKRCALEGQQNQEIPFE
                     QVVERVRPERSLAHSPIFQTVFTWQNNEGGRTLNLPGIEVGASEAVVHGVSKFDLILS
                     VREKGEVLTAVLEYATSLFDEVTVRRMIGYLRTMLAGMVEDEGREIGSIGLLTGEERQ
                     LVLQQWNDTQALYPAVCAHQLVEQQAQRTPHATAVIFQQESLTYAELNSRANQLAHFL
                     IRKGVRPGCRVALCVERGLPMVVGVLGAIKAGGAYVPLDPAYPRRHLAGILRDADPEV
                     VLVDRAGQAVLAGEVAKDKLL"
BASE COUNT          385 a          776 c          398 g          377 t
ORIGIN      
        1 aagcaactta tctttcgcta cctcgcccgc gagcaccgct tgaccagcac ggtctactag
       61 tacgacttcc gggtccgcgt cccgtagaat tcccgccaag tgccgccgag gataagccgg
      121 atcgagcgga acatacgctc cacccgcctt gatcgcgccc aataccccga ccaccattgg
      181 cagaccacgc tcaacacaaa gcgcaacacg acagcccggt ctgacaccct tgcggatcag
      241 aaaatgtgca agctggttcg ctcggctgtt cagttccgca tatgtcaacg actcctgttg
      301 aaagatcaca gcggtcgcgt gcggtgttct ctgcgcttgc tgctctacca actgatgcgc
      361 gcagaccgct gggtaaagcg cctgcgtgtc attccactgc tgcagcacca gctgccgctc
      421 ttctcccgtc agcaacccaa tcgagccaat ctcccgccct tcgtcctcca ccatccccgc
      481 cagcatcgtc cgcaaatacc cgatcatccg ccgcaccgtc acctcgtcaa acagcgacgt
      541 cgcatactcc agcactgccg tgagcacctc gcccttttcc cggacggaca agatcagatc
      601 aaacttcgac acaccgtgga cgaccgcctc cgaagctccc acctcaatcc caggcagatt
      661 gagcgtgcgg ccgccctcgt tgttctgcca cgtaaacact gtctggaata tcggactgtg
      721 cgccagcgac cgttccggcc tcacccgctc caccacctgc tcaaacggta tctcctggtt
      781 ctgctgcccc tccagcgcac atctcttcac acgctccagc agctcccgca ccctcagctc
      841 tcccctcacc tcgacccgca acgccagcgc attcacaaaa aatccgatca atccttcgat
      901 ctgctcgtgc cctcggttcg acaccggcgt ccccaccacc acatcctcct gcctcgccag
      961 ccgccccagc accgccatcc atcctcccaa taccgtcatg aacagcgtcg tccccgctcg
     1021 ctggctcagc ctcttcaacc ctttggtcaa ctccgcatcc aactcgatcc gtaccgcccc
     1081 tcccgcatac tcctgctgcg ctggccgcgg ccggtccatc ggcagctcca gcactgtcgg
     1141 cgctccctcc agcgcccgct cccaatactt cgcttgcttc tccagttttc ccgccgccgc
     1201 ttcgctcctt tgccacaccg cataatcggc atactgcacc ggcaaccccg ccagcgggtc
     1261 ggcttctcca cggcaaaagg ctccatataa ctcactgagc tcccgtaaaa atatccccat
     1321 cgaccagcca tccgaagcta tgtggtgtat ggtcaccagc agcgtgtact cttcctcgcc
     1381 atgccgcacc agcctgccac gaatcactgg tccatgctcc agatcaaatg cctcactaac
     1441 ctcaacctct gcccgctccc tcaccgccaa cttcggatca gcacactcgc gaacgtcctc
     1501 ctgcaccagt cggaacggtt ccgcttctcg cactcgctgc ctcggctctc cttccacttg
     1561 ctcaaaggtc gtgcgcaacg cctcgtgcct ctccacgatc cgatccagcg ctcggcataa
     1621 cgcctctaca tccacgctcc cacgcaactc cactccgaac ggaacgtggt aggcacggct
     1681 cccgccttcc gtctgcgaca aaaaccacaa ccgttgctgc gcatacgaca gcggcaccaa
     1741 caacccacca tgcttcacct tgggtatcaa ctcctgccgg ctttcctctg cgccacgcac
     1801 cgctaatccc aaatctttca gaatcggatg agcgaacacg tccctcacca cgatctctgc
     1861 cttgaaccgc acgcgtatcg cgttcaccac ccgcatcgcc aacaaggagt gtccgccgag
     1921 attgaagaag ttatcg
//
LOCUS       DASRPQ010001053         1390 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1699796, whole genome shotgun sequence.
ACCESSION   DASRPQ010001053 DASRPQ010000000
VERSION     DASRPQ010001053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1390
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1699796"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1196)
                     /locus_tag="VFD73_11925"
     CDS             complement(<1..1196)
                     /locus_tag="VFD73_11925"
                     /inference="COORDINATES: protein motif:HMM:NF014732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /protein_id="HZI74701.1"
                     /translation="MTNEQSTIDLHQYWEIIRRRKLAIIIPTLLALGLAAAYVFVVQK
                     PQYTAQAKVLVNPIVTPSTSNANAKGNTVDMNTEQAAAGSGPVALRARKALGLSSANG
                     DRLLSHLNVNVSGTANVLQFQYTSPDPQQAGRYANAFALAYIAYRNSTAQAPINAAIK
                     ENKSNSAYLMSQVPKAGKVQRGVMVLELRANANQLAQFQADQKLISAGTVITTAGTPS
                     SPSSPKVVKTLLIAGVLGLVIGLGLALIREALDGRIRDADALESRLRAPVLGVIPSFN
                     ARSPEKSLATVTDPRGAASDAYRMAGITLEQLAARDGLRVMMVASPADGGGASTSVAN
                     LGVVLAQAGHRVILVSADLRYPTLQLIFGLSNGHGFCNALMEGMDPERLLKETQVPNL
                     YVMTSGP"
BASE COUNT          215 a          440 c          470 g          265 t
ORIGIN      
        1 gggccggagg tcatgacgta caggttggga acctgggttt ctttcagcag cctctccggg
       61 tccattccct ccatcagggc attgcagaac ccatgcccgt tggagagacc aaagatgagc
      121 tgcagcgtgg ggtaccgcag gtccgccgag accaggatga cccggtgccc ggcctgggcc
      181 agcaccacgc cgaggttcgc gacgctggtc gacgctcccc caccatccgc gggcgacgcg
      241 accatcatca cccgtaggcc gtcccgcgcc gccagctgtt ccagggtgat acccgccatc
      301 cggtaggcat cgctggcggc accgcgcggg tcggtgaccg ttgccagcga cttctccggg
      361 gagcgcgcgt tgaagctggg gatgacgccc aggaccggtg cccgcaggcg gctctcgagc
      421 gcatcggcgt ccctgatccg cccatccagg gcctccctga tcagggcgag gccgaggccg
      481 atcaccagcc caagcacccc ggcgatgagg agggtcttga cgaccttggg cgaggacggc
      541 gaggaggggg tccccgcggt cgtgatcacg gttcccgccg agatcagctt ctggtcggcc
      601 tggaactgtg caagctggtt cgcgtttgcg cgcagctcca gtaccatcac gccccgctgg
      661 accttcccgg ccttcggcac ctgcgacata agatacgcac tattgctctt gttttccttg
      721 atggcggcgt tgataggcgc ctgcgcggtg ctgttccggt aggcgatata ggccagggcg
      781 aaggcgttgg cgtaccgccc ggcctgctgg gggtcgggcg aggtgtactg gaattggagg
      841 acgttggcgg taccagagac gttgacgttc aggtggctca gcagccggtc gccatttgcg
      901 ctggaaagcc cgagcgcttt ccgggcccgg agcgcgaccg ggccggaacc ggccgccgcc
      961 tgttcggtgt tcatgtccac cgtgttgccc ttggcgttgg cgttgctcgt ggacggggtc
     1021 acgatagggt tgacaagcac cttcgcctgg gccgtgtatt ggggcttttg caccacaaag
     1081 acatacgcag cggccagccc gagggccagc agcgtgggaa tgatgatcgc gagcttccgc
     1141 cttcggataa tctcccagta ctggtgcaga tcgatggtcg attgttcgtt ggtcatgttg
     1201 taccgctccc cgtgaccgag tgaggaagca gcctaacatc cggaggctga ttccttccgt
     1261 gctctgatga accttgtcca acctttaccc tgctcagagg ggggttgcgg ttcccgtcca
     1321 tggcttggtt catgtggggg catcctcccg gcggtgccgc agcctctcca ccgcggaggc
     1381 ggccagcagg
//
LOCUS       DASRPQ010001054         3148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_127562, whole genome shotgun sequence.
ACCESSION   DASRPQ010001054 DASRPQ010000000
VERSION     DASRPQ010001054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3148
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127562"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            237..1973
                     /locus_tag="VFD73_11930"
     CDS             237..1973
                     /locus_tag="VFD73_11930"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HZI74702.1"
                     /translation="MVRIGYLAFAACATFVLPFRTAEAQHGAPDLTGLWAAKVRFGPD
                     IRGPLTLLRSGKAWRADFAGFSLPVQADGEKLSFALPDGKGYFRGSLSSIAVIGQWVG
                     AKSQTSGMSYATPVILQPNGANRWRGEVKPLDDAFTFYLPVTRRQDGSYSAFLRNPER
                     NQGRFIPVSRIEIKDDVVTLIGGRRNQPETTQAQGRFDDGILRIPLGGTSFDFSRVEG
                     ETSTPFYPRGKPAQRYRYAEPLQLDDGWPVATVEQVGISRSGIESLVQKLIDMPMDSF
                     STSQIHSLLIARHGKLAVEEYFHGYHRDQPHDTRSAGKSLMAVLLGAAMQAGVPIHLS
                     TPVYRTMLDSLPPDLEPRKRAMTLEHLISMTAGYDCASDSAPGNEDLMQSQSAEPDWY
                     RYTLNVPMLTAPGDTIVYCSIEPNLAGGMLRKIAGEPLPEMFYRLVARPLKMSNYHLF
                     LSPTGEAYGGGGHQFLPRDLLKFPQLMLNDGRWNGRQIISREWARRSGSALRDLTSAQ
                     QYGWLWNSVEYPYKGGKVRAFFAAGNGGQIFMGIPALDLVIGFTGGNYNDPALFIPQQ
                     KFVPELILPTIE"
     gene            complement(2000..2122)
                     /locus_tag="VFD73_11935"
     CDS             complement(2000..2122)
                     /locus_tag="VFD73_11935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74703.1"
                     /translation="MGHGVLAIAYVFFLVFVTVMVLYAVYIMGSLVIYIRHRLA"
     gene            2374..>3148
                     /locus_tag="VFD73_11940"
     CDS             2374..>3148
                     /locus_tag="VFD73_11940"
                     /inference="COORDINATES: protein motif:HMM:NF013790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74704.1"
                     /translation="MREQIERANRAYYVNDAPEITDAEYDRLFRELQALEAEHPELQS
                     PDSPTQRVGAIAATALAKHTHARPMLSLANAFDADELAAWEERNARLAPEVKTGGYTT
                     EIKIDGAAVSLTYENGRFLLGATRGNGTIGEDVSHNLRIINDIPLSLQGTDHPRLMEV
                     RGEVYMPYASFTRINKEREKEGETPFANPRNAAAGGLRQLDPALTKKRRLRMFVYAVE
                     VIEGRLDARTQSEILDLLAGWGFEVEPNRRRFQTLAEVQA"
BASE COUNT          622 a          995 c          963 g          568 t
ORIGIN      
        1 ctccagtaat tcacgtcccg gcgtgctgct ggtgcccagc atgctgacct tgggggggtt
       61 gcgttgcggc ataggtgcct cgggccggtc tagtccggga gctcgcgaag tgtgacagca
      121 acctgtgaga gaaggtgtga atctttcgtg aattcaggtc ggcgcagagc acgcaacctt
      181 cgccggttca actgtgtctc agtcggggac cgccttcctc tcacccggag ccgagcatgg
      241 ttcggatcgg atacctcgca tttgccgcct gcgccacgtt tgtgctgccc ttccggactg
      301 ccgaggccca gcacggtgcg cccgatctga ccggactctg ggcggccaag gttcgcttcg
      361 gccccgacat tcgcggtccg ctcacgttgc tccgaagcgg caaggcctgg cgggcagact
      421 ttgctggttt ctcgctgcca gtccaggctg atggtgaaaa actgtcgttc gcgctgccgg
      481 atgggaaagg atattttcgc ggcagcttga gcagcatcgc cgtaatcggg cagtgggttg
      541 gagccaagag ccagaccagt ggtatgagct acgccacccc agtcatactc cagcccaacg
      601 gcgcgaatcg ctggcgcggc gaggtcaaac ctctcgatga cgctttcact ttctatctgc
      661 ccgtcacccg gaggcaagac ggcagctact cggcattcct gcgaaacccc gaacgcaatc
      721 agggccgatt cattccagtc tcccggatcg agatcaaaga cgatgtggtg accctgatcg
      781 gcggccggcg caaccaaccc gagacaacac aggcccaggg tcgattcgac gacggcatcc
      841 tgcgaattcc gctcggcggc accagcttcg atttctcccg agttgagggg gagacctcga
      901 ctccgttcta tccccgcggc aaaccggccc agcgctaccg ctatgcggag ccactccagc
      961 tggacgacgg ttggccagtg gcaacggtgg aacaggttgg catctcaagg tcggggatcg
     1021 agtcgctggt gcagaagctc atcgatatgc cgatggattc gttctccacc tcgcagatcc
     1081 acagcctgct gattgcgcgt cacgggaagc tggccgtcga ggagtacttt cacggctacc
     1141 atcgcgacca gccccacgac acccgctcgg ctgggaagag cttgatggcg gtgctgctcg
     1201 gcgccgcgat gcaggctggt gttcccattc acctgagtac tccggtgtac cggacgatgc
     1261 tggattcgct tccgccggat ctggagcctc gcaagcgagc gatgacgctg gagcatctga
     1321 tctcgatgac cgcgggctac gactgtgcga gcgactcagc gccgggtaac gaggacctga
     1381 tgcagagcca gagcgccgag ccggactggt atcgctatac tctgaacgtg ccgatgctga
     1441 cagcaccggg cgacaccatc gtctactgca gcatcgagcc gaatctcgcg ggcggcatgc
     1501 tgcggaagat cgcgggagag ccgctgcccg agatgttcta ccgcctggtc gcccggccgc
     1561 tcaagatgag caactatcac ctgttcttga gccctaccgg agaggcatac ggtggcggcg
     1621 gccatcagtt cctgccgcgt gatctcctga agtttcccca gctgatgctc aatgacggcc
     1681 gctggaatgg ccggcagatc atcagccggg aatgggcccg caggtccggg tcggccctgc
     1741 gcgacctcac cagtgcccag cagtacggct ggctctggaa ttcggtggag tatccctaca
     1801 agggcggtaa ggttcgcgcc ttctttgccg cgggcaacgg tgggcagatc ttcatgggca
     1861 ttccagcgct ggatctggtg atcgggttca ccggcggtaa ttacaacgat cctgccctat
     1921 ttatcccgca acagaagttc gtacccgagc tgatcctccc caccatcgaa tgagcctgaa
     1981 ggcggcggcg attcaccacc taggccagcc gatgccgaat gtagatcacc aggcttccca
     2041 tgatgtacac ggcatagagc accatcaccg tgacaaagac gagaaagaaa acgtaggcaa
     2101 tcgcgagaac accatgcccc acccatgagg cggctctgcg cgaccaacct gggagccgcc
     2161 gccacaacga gactgttgcg ctcttcaacc agggtaggcc agctccgacc gccgttgccg
     2221 ccccaaagag tgaaggacct gccatctttt gcgctctcgg aaggatgatg taaggcagat
     2281 ttgcatgctc cgggccgatt ctccgcctct ccgactctcg gcctctccac cgttattttg
     2341 actgccatgt caccagcaga gcaggctgcg cgcttgcggg agcagatcga gcgcgccaac
     2401 agggcgtact acgtcaatga cgcgccggaa atcaccgacg cggagtatga ccggctgttc
     2461 cgcgagctcc aggcgctcga ggccgagcat ccggagctgc agagtcccga cagtccgacg
     2521 cagcgagtcg gggcgattgc cgcaacggcg ctggccaagc acacccacgc acgtcccatg
     2581 ctgtcgctgg ccaatgcgtt cgacgccgat gagctggccg cgtgggagga gcggaacgcg
     2641 cggcttgcgc ccgaggtaaa gaccggcgga tacacaaccg agatcaagat cgacggcgcc
     2701 gccgtcagcc tcacctacga gaacggccgt ttcctgctcg gggctaccag aggcaatggg
     2761 acaataggtg aggacgtcag ccataacctt cgcataatca acgacatccc gctttcactt
     2821 caaggcactg atcatcccag gttgatggag gttcggggcg aagtctacat gccgtacgcc
     2881 agcttcactc gcatcaacaa ggagagagag aaggaaggcg agacgccgtt cgccaacccg
     2941 cggaacgccg cggccggcgg gctccgccag ctggatcctg cgctcaccaa gaagcggcgt
     3001 ctccggatgt tcgtctacgc ggtggaagtt atcgaaggac ggctcgatgc ccgcacccaa
     3061 tccgagatcc tcgacctgct cgccgggtgg ggatttgagg tcgagcccaa tcgcagacga
     3121 tttcagactc tcgcagaagt gcaggcac
//
LOCUS       DASRPQ010001055         2419 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3274749, whole genome shotgun sequence.
ACCESSION   DASRPQ010001055 DASRPQ010000000
VERSION     DASRPQ010001055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2419
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3274749"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..573)
                     /locus_tag="VFD73_11945"
     CDS             complement(<1..573)
                     /locus_tag="VFD73_11945"
                     /inference="COORDINATES: protein motif:HMM:NF015563.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74705.1"
                     /translation="MPKLRFPHPLTLLVGCVIIAAALTWILPAGHYERREDPKTGRNI
                     VIAGTYRRIEAQPVGPFQAVVAIPKGIVDAASVIALVFLIGGAFTVIERTGTLGRLAE
                     TLADRLRGRGLVVIPVASVAFSLGGILMQMQEELIAFVPMLLLLTRPLGFPPVTAVAM
                     SLGVAAVGAAFSPVNPFQVIIAQKLAELSPG"
     gene            complement(586..858)
                     /locus_tag="VFD73_11950"
     CDS             complement(586..858)
                     /locus_tag="VFD73_11950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74706.1"
                     /translation="MTNRGRLVALIVGLAFAAFLLWSTLASQHVECSVVVSFAGQQGS
                     GTASAATQPDALREAQTAACGPLTGSMNDRIACSRVPPVSRLCHSI"
     gene            complement(861..1175)
                     /locus_tag="VFD73_11955"
     CDS             complement(861..1175)
                     /locus_tag="VFD73_11955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74707.1"
                     /translation="MASPLDQSGGGQASAAESGEKIQECAIASVRWVAVGTPVQMGLD
                     LDSVFRVQLLVQIFPKAKDYFVTFHPTPNAAFTADTHLRTGIRWRRFLDCSFLGAKGL
                     GR"
     gene            complement(1186..1509)
                     /gene="cutA"
                     /locus_tag="VFD73_11960"
     CDS             complement(1186..1509)
                     /gene="cutA"
                     /locus_tag="VFD73_11960"
                     /inference="COORDINATES: protein motif:HMM:NF015077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent-cation tolerance protein CutA"
                     /protein_id="HZI74708.1"
                     /translation="MTGCCQVTTTLPDQAAAGQLAATLVGERLVACAQVFGPASSTYW
                     WKENVEQASEWYCQVKTTMPMLPALKQRIRELHPYEVPELIAVPVLDGDERYLRWIEE
                     SVRKQ"
     gene            complement(1548..2084)
                     /locus_tag="VFD73_11965"
     CDS             complement(1548..2084)
                     /locus_tag="VFD73_11965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74709.1"
                     /translation="MSPRRSVDLPIPADHWASVVCGASGSSEPTGSLDTLAKQHSALG
                     VLMWRLCSLGLVVVTMVSCRDYHLSSRITNQDGLVPADQYARYGREQAEEIAIAREFG
                     HASQGSSADQRKKQAEAGAAYARSLPDVVGVKADPQGLLLTVQFKSGWRTMITPLQDG
                     KRGAETAGLPGTPTAKPK"
     gene            2083..>2419
                     /locus_tag="VFD73_11970"
     CDS             2083..>2419
                     /locus_tag="VFD73_11970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74710.1"
                     /translation="MLKRSVVLAVLAVAHPLIAAGQQPAVAPPPVHVLHWWEGAVVLG
                     AVSGLMLLDKPVQRFAQDNRTSSGDDVARAFRHVGQPEIYGTVTLGLVAAGLVAGDNE
                     LTRAGGRLAA"
BASE COUNT          445 a          745 c          763 g          466 t
ORIGIN      
        1 gccaggagaa agctctgcca gtttctgggc gataatgacc tggaaggggt tcaccgggct
       61 gaacgctgct ccaacggcag cgacgcccag gctcatggcg actgctgtga ctggagggaa
      121 gcccagcggg cgggtcagca gcagcagcat cggtacgaag gcgatgagtt cttcctgcat
      181 ctgcatcagg atgccgccca ggctgaacgc cacgctggcc actggtatga ccaccagacc
      241 acgtcctcga agccggtctg ccagcgtttc agccagccgg ccaagcgtcc cggtcctttc
      301 gatgacggta aacgcgccac caatcaagaa gaccagcgct atgacggagg cagcgtcgac
      361 gatgcccttg ggtatcgcga cgacagcctg gaaggggccg actggttgcg cttcgattcg
      421 gcggtaggtc ccggcgatga cgatgttccg gccggtctta gggtcttccc gacgttcgta
      481 atggccggcg ggaagaatcc aggtgagggc agcggcgatg atcacgcagc ccaccagcag
      541 agtgagtggg tgcggaaagc ggagcttagg cactgatggt cgccgtcaga tgctatggca
      601 cagacgggag accggaggaa ctcggctgca ggctatgcgg tcgttcatgc ttccggtcag
      661 cggtccacag gcggcagtct gggcttcccg aagagcgtct ggctgggttg cggcagacgc
      721 cgtcccgctg ccctgctggc cggcaaagga gacgacgacg ctgcactcga cgtgctggga
      781 tgccagcgtg gaccacagca gaaatgcggc aaaggccaat ccgacgatca gcgcaaccag
      841 ccgcccgcgg ttagtcatct tcagcggccc agccctttgg cgccgaggaa tgagcagtcc
      901 aggaaccgac gccaccggat tcctgttctg aggtgagtat ccgctgtgaa cgctgcattg
      961 ggggtaggat ggaatgtgac gaagtaatcc ttcgcctttg ggaatatctg gaccaggagc
     1021 tggacccgga agacggagtc gaggtcaagg cccatctgga ccggtgtccc cactgctacc
     1081 cagcgtaccg atgcgatcgc gcattcctga atcttctcgc ccgactccgc agcagatgcc
     1141 tggcccccgc cactctggtc caatgggctc gccacctgac ctgattcatt gcttgcggac
     1201 tgattcctcg atccatctca ggtatcgctc gtcaccatcc agcaccggca ccgcgatgag
     1261 ctccggcacc tcataggggt gtagctcccg aatcctttgc ttcagggctg ggagcatcgg
     1321 catcgtggtc ttcacctgac agtaccactc cgacgcctgt tcgacatttt ccttccacca
     1381 ataggtgctg gacgccggtc cgaacacctg ggcgcaggca accaggcgtt caccgaccag
     1441 ggttgcggct aactggccgg cggccgcttg atcgggcagc gtagtcgtga cctgacagca
     1501 gccggtcact tcaggaagcc actggatttg cggtgtatat tgccctgcta cttaggcttt
     1561 gcggttggag taccgggtaa tccggcggtt tccgcgcccc gtttcccgtc ctgaagaggg
     1621 gtgatcatcg ttctccagcc gctcttgaac tgtacggtca gcaataatcc ctggggatca
     1681 gccttcaccc cgaccacgtc tggaagagac cgggcgtagg cggcgccggc ctctgcctgc
     1741 tttttccgct gatctgctga ggatccctga ctagcgtgcc cgaactcacg ggcaatggcg
     1801 atttcttcag cctgctcccg tccgtagcgt gcgtattggt cggcggggac tagtccatcc
     1861 tgattggtga tgcgagatga cagatgatag tcccgacagg ataccatcgt gactacgact
     1921 agcccgagac tacagagtcg ccacatcaat acccccagcg ctgaatgttg cttcgccagc
     1981 gtatcgagcg aaccggtcgg ctcgctggag cccgatgcgc cacaaactac actggcccag
     2041 tggtcggccg gaatcggcag gtcgactgag cgtcgcggac tcatgctgaa acgatcggtg
     2101 gtgctggccg tgttggccgt cgcccacccg ctgattgccg caggtcagca gcccgcggtt
     2161 gccccgcctc cggtgcatgt cctccactgg tgggagggcg ccgttgttct cggcgcagtt
     2221 tccgggctca tgttgctgga caagccggtt caacgctttg ctcaggacaa ccggacatcc
     2281 agcggagacg atgtggctcg agccttccgt catgtcggtc aaccggagat ctatggcacc
     2341 gtgaccctcg gcttggtcgc cgcgggattg gtggcaggag acaatgagtt gacccgtgcg
     2401 ggcggccggc tcgcggcca
//
LOCUS       DASRPQ010001056         1114 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2017627, whole genome shotgun sequence.
ACCESSION   DASRPQ010001056 DASRPQ010000000
VERSION     DASRPQ010001056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2017627"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VFD73_11975"
     CDS             <1..184
                     /locus_tag="VFD73_11975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74711.1"
                     /translation="ECAYDIPGIERNSRTSMDAFGEWKCGWPSSSLLISSSDSPCRIE
                     YPPTLWVPETASPYAT"
     gene            complement(172..558)
                     /locus_tag="VFD73_11980"
     CDS             complement(172..558)
                     /locus_tag="VFD73_11980"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HZI74712.1"
                     /translation="MAAIGKQGQARSAKSKCPRFQGTSNRKRDSGVRIIKTPVRAPRA
                     NAIAERWVGSARRECLDQMLIADERHLWLVLGEYTDHYNGHRPHRSLPQDPPAGRLHP
                     PVEMSNMRVLRRDRLGGFIREYTQVA"
     gene            complement(623..892)
                     /locus_tag="VFD73_11985"
     CDS             complement(623..892)
                     /locus_tag="VFD73_11985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74713.1"
                     /translation="MATSKQTRAARRNVTKAQDAASSKRTIAHMPKKTRTALGKQGAA
                     VAQRKRTGGNAPKTRAELYEMAKQRDLPGRSKMGRDELARKLGEK"
BASE COUNT          156 a          366 c          360 g          232 t
ORIGIN      
        1 cgagtgcgcc tacgacattc ccggcatcga gaggaactca cgcacctcga tggacgcatt
       61 cggcgagtgg aaatgcgggt ggccgtcgag cagcttgctg atctcctcca gcgactcgcc
      121 ctgcagaatc gagtacccgc cgaccttgtg ggtgccggaa acggcgtcac cctatgcgac
      181 ctgagtgtat tcgcggatga agccgccgag acggtctcgc cgtagaacac gcatgttgct
      241 catttctacc ggtggatgga gacgcccggc gggcggatcc tgcggcagcg accggtgcgg
      301 ccgatgtccg ttgtaatgat cggtgtactc accaaggacc agccacaggt gccgttcgtc
      361 ggcgatcagc atctggtcca ggcactctcg gcgggcgctg cccacccagc gctccgcgat
      421 tgcgttcgcc cgaggcgccc ggacgggcgt cttgatgatc cgcacgcccg agtcgcgctt
      481 acggttcgag gttccctgaa agcgtggaca cttcgatttg gctgatcttg cctgtccctg
      541 cttcccgata gctgccatgt tccgccggag cgccgagcac cggctgatcc tggatagcgg
      601 agaagcgcgg gcatcctcac cgttacttct cgccgagctt cctggcgagt tcgtcgcgtc
      661 ccatcttgga gcgccccggc agatcacgct gcttggccat ctcgtagagc tcggcccggg
      721 tcttgggagc gttaccgccg gtccgcttgc gctgcgccac ggccgcgccc tgcttgccca
      781 gggcggtccg ggtcttcttc ggcatgtgcg cgatcgtccg cttcgacgag gctgcgtcct
      841 gggccttagt gacgttccgc cgtgctgccc tggtctgctt gctggtggcc atgtctgcct
      901 cccgcttctt ggcttgtgac tagttccggt actgccagcc ggacccgctt tcaaacccgc
      961 atatcccccg ccccgggtgt ttgtgctcgc gtttttccgg tagctgggcc aggtcgcgga
     1021 cgaaagaggc acacatggcc gggcagcggt gctgagcggg tcaggcggat cgtacggtca
     1081 tggcagtgcc cggatacgat tcgggtttcg gccg
//
LOCUS       DASRPQ010001057         1364 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2018117, whole genome shotgun sequence.
ACCESSION   DASRPQ010001057 DASRPQ010000000
VERSION     DASRPQ010001057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1364
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2018117"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            164..1147
                     /locus_tag="VFD73_11990"
     CDS             164..1147
                     /locus_tag="VFD73_11990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HZI74714.1"
                     /translation="MNQARTTAPSDGILESARRVIQTEAAAIAALEARLDQKFLRAVE
                     VMLNAPGRVIVSGIGKSGIIARKVAATLTSTGTPAIFLHPLDALHGDLGVVGVSDVAL
                     LLSKSGESEELLKLLECLCRFGSTIIALAGRVDSTLGREAQIVLDCGVAEEACPYDLA
                     PTSSTTAMLAMGDALAVALLLRRGFREEDFARLHPGGTLGRRLLRVREVMVSDGIPVL
                     LPTATMRDCVPLLAERRGTVVIVNREGGLLGVVTAGDLTRLMEKSDDFLGVPVEQVMT
                     RTPRTAQAEEFAAHAVGVMERHGVMALPVLDPEQRVVGIVHLHDLMRARAV"
BASE COUNT          240 a          409 c          430 g          285 t
ORIGIN      
        1 gagctggggt ttcgtccgct ggagagcttc gaaaccggca ttcggaaaac tctggcgtgg
       61 tatctcgcca atgagcgttg gtggcgagcg gtcatggacg ggagctaccg cgaatgggtc
      121 cgaactcact atcgcacaac ggtcccgtcc gagacctgat cccatgaacc aggcgagaac
      181 cactgcacct tccgatggga tcctagaatc agcccgccgc gtcatccaga cggaggcggc
      241 ggccattgcc gcgctggaag ctcggctgga ccagaagttc ctccgcgcgg tggaggtcat
      301 gctgaatgct ccgggccggg taatcgtgtc cggaatcggc aagtcgggta tcattgcccg
      361 caaggttgcc gctaccctca cctcgacagg cacacccgcc attttcctgc atcccctgga
      421 cgctctgcat ggcgatctcg gggttgtagg agtatccgat gtggcgctcc tcctatccaa
      481 gagcggcgag tctgaggagt tgctgaagct cctggagtgt ctgtgccgct tcggatccac
      541 gatcatcgcc ctggccggaa gagtcgactc gacgctggga cgcgaagcgc agatcgtttt
      601 ggactgcggt gtggccgagg aggcctgccc ctacgatctg gcgccgacca gctcgaccac
      661 agccatgctg gcgatgggcg atgccctggc agtggccctg ctgctccggc gcgggttccg
      721 agaagaggac tttgcgcggc tccatccggg aggaacgttg ggccgtcgcc tcctccgagt
      781 ccgcgaggtc atggtctcgg atgggattcc cgtacttcta ccgaccgcga cgatgcgcga
      841 ttgtgttcct ctcctggccg aaagacgagg aacggtcgtt atcgtgaaca gggaaggagg
      901 attactcggc gtcgtgaccg ccggcgatct gacccgcctg atggaaaaat ccgatgattt
      961 cctgggagtt cccgtcgaac aggtcatgac ccgcacgccc cgcaccgctc aggccgagga
     1021 gtttgccgcc catgcggtgg gagtgatgga aaggcacggt gtcatggccc tgccggtgct
     1081 ggaccccgag cagagggtcg tgggcatcgt ccacctgcac gacctgatgc gagcccgcgc
     1141 ggtctagcga gcgtaggttg ctgctctgag tgtcctttct gtcttcgtgg ccgtgtcggt
     1201 ctgactcatt ccccattagg atccgtcccc aacatcgaac tttgtgaatc tcttcacatt
     1261 ctaggcaaac accgctagga ttgtgtccgc cttaggtttg tctatgttgc gacccaggca
     1321 tggattagga tacgcaagtt cttgcactat ggcgtagctc ttgc
//
LOCUS       DASRPQ010001058         1356 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3580076, whole genome shotgun sequence.
ACCESSION   DASRPQ010001058 DASRPQ010000000
VERSION     DASRPQ010001058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3580076"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            593..>1356
                     /locus_tag="VFD73_11995"
     CDS             593..>1356
                     /locus_tag="VFD73_11995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74715.1"
                     /translation="MSPNSVLMGPNQALQFQAAVDNTTGFLSTSNGGKGRGRTRRSVV
                     DLSVTPHTLTMAEGSAASFSVTGMLADSTSVQPSVTWSATGGVIDANGKFTAGAVPGN
                     FIVSATASSGVSDTAAVVITQTVPAPTNITVSPTTASLPVGGSKHFVATGTSSDGSTV
                     AVGARYAATGGTISPDGLYQAGQTPGTFKVVATDTLTSLSDTASVIIQPPPATLQAIV
                     LTPSSASLTAGATQQFTATGKMSDGSISTITVTWTAT"
BASE COUNT          276 a          432 c          382 g          266 t
ORIGIN      
        1 gcagcggccc gacgccgtca atcagcgcca tgtctcgcca ggaaaaactc caggcgactg
       61 gtgccaagcc ggaggcttac cgctggctcg gaggccgccg ggagagccat gagctcggcg
      121 tgtgccaaga gtgctcgtcg caccgcattt cctgtggcgc ctgtcaggga cgatggacgc
      181 cctgcggccg cgtacttttt ttgcactctt gtacataatc tggccagata atctgttaca
      241 atgtaacagc tttgtagcct gcaacctcaa ttggggaggc aagttgtaaa tggcagtaga
      301 aaatctaaat tgcgatactg tcgactttct tgacttccat caccaccatc gcgacacaat
      361 attacaccta cccaagggtg gtggggggag tcctgcgggt tgggtccaag ccaaggagaa
      421 gcctagagaa gaggtcccca tgacgtacac gtttaagatt tcgcgccgac tggcacggct
      481 gagagcgccc agcttcgcgg ttctcgcggc ctctttcctc accctctcat gcacggacga
      541 gcagtcaact ggaccgaata cactaccttc tgagtccccg accggagtat cggtgtcacc
      601 gaactctgtc ttaatgggac ccaatcaggc cctgcagttc caggccgctg ttgacaacac
      661 cactggtttc ctgagcacct cgaacggagg aaaaggtcga ggccgtacgc ggcgttccgt
      721 agtcgatctg agcgtcacgc cgcataccct gaccatggcc gagggttccg ctgccagctt
      781 cagcgtcacg ggcatgctcg ctgacagcac ctcggtccag ccttccgtca cctggtccgc
      841 aaccggtggc gtcatcgatg ccaatggtaa gttcacggcc ggcgcagttc ccggaaactt
      901 catcgtaagt gccacggcat cgagcggggt ctcggataca gccgcggtgg tgatcaccca
      961 gactgtaccg gctccaacga acatcaccgt gagtcccacc accgcatcgc tcccggtggg
     1021 cggcagcaag cacttcgtcg cgactggtac atcgagtgac ggcagcacgg tcgcagtcgg
     1081 tgcccggtat gccgcgaccg gaggcacgat ctctccggac ggcctctatc aggcagggca
     1141 aacgccgggt actttcaagg tggtggctac ggataccctc accagccttt ccgacactgc
     1201 ctctgtgatc atccagcctc cgccggccac gttgcaggcg atcgtactca caccctccag
     1261 cgcgtcgctt accgctggtg caactcagca gttcaccgcc accgggaaga tgagcgatgg
     1321 ttcgatcagc accatcacgg tgacatggac tgctac
//
LOCUS       DASRPQ010001059         1038 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2651952, whole genome shotgun sequence.
ACCESSION   DASRPQ010001059 DASRPQ010000000
VERSION     DASRPQ010001059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2651952"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(295..747)
                     /locus_tag="VFD73_12000"
     CDS             complement(295..747)
                     /locus_tag="VFD73_12000"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HZI74716.1"
                     /translation="MPGIVVGVDGSDHSHRALIWAMQQAAQQHVPLTVLAVRPDPVRP
                     VTGIYWGVHAYPEDAHNREAARKAIQQIVEQVRNEIGETAPQATVNVVTGDPAEELVN
                     ASRDASMVVVGSRGSDGFASLLMGSVSSKVAHHAACPVVVVRGEGQAA"
BASE COUNT          182 a          350 c          325 g          181 t
ORIGIN      
        1 tccgcttccc cgggctcgaa caagcccagc cacacgaagc caccctcgtt acgccggtcc
       61 gctgcttcct ccagcgacat cggcgcgtca tcgctccgct ggccgtcctt gtagtgagca
      121 cagtcgacga tcatctgggc gactccttgt ccgagcgaga gctggcatta gacgtcaagc
      181 gctataaacc cacgctgtgg cgccgaaacc tcggcgcaca gccgcgatac caatcggtct
      241 ccgagcgcag caggtcacat ggcactcccg aggcatccgc ctgacacggc ccgcctacgc
      301 ggcctggcct tccccccgga cgaccacgac ggggcaggct gcgtggtgtg cgaccttgct
      361 gctcaccgag cccatcagga gcgaggcaaa cccgtcgctg ccgcgagacc ccacgacgac
      421 catgctggcg tcacgcgagg cattgacgag ctcctccgcc ggatccccgg tgaccacgtt
      481 caccgtggcc tgaggcgccg tttcgccgat ttcgttcctg acctgttcca caatttgctg
      541 gatcgccttc cgcgcggcct cgcggttatg ggcatcctct gggtaggcgt gcactcccca
      601 gtaaatgccc gtgaccgggc gaaccgggtc cgggcggacc gccaggacag tcagtgggac
      661 atgctgctgg gcggcttgct gcatcgccca gataagagca cggtgggaat ggtccgagcc
      721 gtctacccct acgacgattc caggcatctc tgctcctcag attcccgatc cgttccaatt
      781 ctatcctgat cacagtatca tttgaagtgg aggcgaatag agctgaggcg cccggcgggg
      841 caacgagacc tggctgcgcg aacgaccgag tgcgtgagcg cgcccaggcg gtgaattccc
      901 gatgaatcct gctgcggggc cgtggtagcg gcgtgactgg cccgcggata cccttggtga
      961 gagcgtggtc aggagctgga tggggccgga tatgactgag agtcggcgag tccaagcagg
     1021 tcaccctagc gcggacgg
//
LOCUS       DASRPQ010001060         1114 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3275834, whole genome shotgun sequence.
ACCESSION   DASRPQ010001060 DASRPQ010000000
VERSION     DASRPQ010001060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3275834"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(542..>1114)
                     /locus_tag="VFD73_12005"
     CDS             complement(542..>1114)
                     /locus_tag="VFD73_12005"
                     /inference="COORDINATES: protein motif:HMM:TIGR04085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPASM domain-containing protein"
                     /protein_id="HZI74717.1"
                     /translation="HVQYYGWALANRAKLMTTREQVERAVGCVETLRQRYCGIIVIDA
                     VLPDYFARYPKPCLGGWGRRSLNVSPSGKVLPCHAAETIPGLEFWSVREHSLADIWRS
                     SPAFNAFRGTDWMKEPCATCPRRLEDFGGCRCQALALTGDARATDPVCHLSPHHVLVA
                     ELAEQRDDSPYIYRRQRTDRTVAVEMAKVG"
BASE COUNT          223 a          337 c          357 g          197 t
ORIGIN      
        1 ggttttcata tccacgttaa tccgaattgc ggtcccgcca acgggccaag tggtcagcca
       61 gcggctggga tggcagcggg aggccattac gaccctgcta acactggcaa acatctcggg
      121 ccactgggtg agggtcacaa gggcgatatg ccagtgctta ccgttgatgc tagcggcaaa
      181 gctacaaagg ccgttacagc accacatctc accgtggccg acgttaaagg ccgctcgata
      241 atgatccacg caggcggtga taattactcc gaccaaccgg cacccctagg cggcggtggc
      301 gcgcgcattg cctgcggtgt ggccatgtag aaccgccgac gcacgcactc cctgaaaagc
      361 agttcgagat cgtacacgtt ggatggcctg acgccgtgca tttttcatcc gccggtttag
      421 ccggtgtcgc tccgagcgga cccattcggg gcgctgtagc tcgggtaggg aggttctctc
      481 tgccaaccgc ggtcaagcga ggtcggggcg ggctgccaat gagagacatt gtccgctaac
      541 ctcagcctac cttggccatt tcaaccgcga cggtgcggtc ggtccgctgg cgcctgtaaa
      601 tgtagggcga gtcgtcgcgc tgctcggcga gttcggccac gaggacatga tggggcgata
      661 ggtggcagac tggatcggtt gcacgtgcgt cacccgtgag cgccagagct tggcagcggc
      721 agccgccgaa atcctccagg cggcgcggac aggtggcgca tggctccttc atccagtccg
      781 tgcctcggaa agcgttgaac gccggtgagg accgccagat gtcagcaagc gaatgctcac
      841 gcaccgacca gaactcgagg cccgggatgg tttcggccgc atggcagggc agaaccttgc
      901 cagacggcga gacgttgagc gaccggcgcc cccaaccacc caggcaaggt ttagggtagc
      961 gagcgaagta gtccggtagg acagcgtcga tcacgatgat accgcagtag cgttggcgca
     1021 gagtctcgac gcaaccaacc gcgcgctcga cttgctccct ggtcgtcatc agcttcgcgc
     1081 ggttcgcaag agcccagccg taatactgaa catg
//
LOCUS       DASRPQ010001061         2532 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1382803, whole genome shotgun sequence.
ACCESSION   DASRPQ010001061 DASRPQ010000000
VERSION     DASRPQ010001061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2532
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1382803"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..576)
                     /locus_tag="VFD73_12010"
     CDS             complement(<1..576)
                     /locus_tag="VFD73_12010"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HZI74718.1"
                     /translation="MSVRRRVVVLAVPPIEELDLVGPVQVLSTANRLARSGRAPYDIS
                     VVSTTRDLMIQGESGLSLLAHAYYKDAAGEIDSLLLVSGVSTRNQRDEELAGWLRTTV
                     PGCRRVGAVCISAFILARAGVLTNQRATVHWKYAHELAYRYPGLSVDPDPIWVQAGNI
                     YTSGGFSAGIDLALAWVAEDCGNAIATEAARE"
     gene            1005..1457
                     /locus_tag="VFD73_12015"
     CDS             1005..1457
                     /locus_tag="VFD73_12015"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI74719.1"
                     /translation="MHLIRDLERTRDETLRYFSLPETELARTYGPGKWSVRFILLHLS
                     DSETVLYDRIRRILSERRQVIWAYDQDAWARGLDYSQVPVVLGRRIYESVREAVIYFA
                     GRFYEEKGALEFVHSETGVRTLKDEFEKVASHNEHHLAQIRLALRSKP"
     gene            1557..1877
                     /locus_tag="VFD73_12020"
     CDS             1557..1877
                     /locus_tag="VFD73_12020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74720.1"
                     /translation="MTFKSPRWQPIAVLLSAANLVAVGFAAGGGEGLHAGVHAVLALA
                     FGLWAQRLMQRPLEIRPDERLDALEEEVGDLRRELGEAQERLDFAERVLVRSQEGRRL
                     GPES"
     gene            1892..>2532
                     /locus_tag="VFD73_12025"
     CDS             1892..>2532
                     /locus_tag="VFD73_12025"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HZI74721.1"
                     /translation="MQGSALQVTCIGGPTALLQLGGLRLLTDPTFDPAGSEYPTPLYT
                     LQKLSAPAVSPKAIGSLDAVLLSHDHHFDNLDRTGRTLLQSVPKVLTTAGGAERLNHA
                     AVGLTPGDQHILRAPDGRQLLVTATPARHGPPEGDRGPVVGFTLHWTDASDQVLYISG
                     DTVWYDGVAALMRREPIRVALLFAGAARVAAVGPAHLTFTADELVEAARACPEA"
BASE COUNT          440 a          838 c          800 g          454 t
ORIGIN      
        1 ctcccgagcc gcttcggtag cgatcgcgtt gccgcaatcc tcagccaccc aggcgagcgc
       61 gagatcgatt ccggcggaga atccgcccga ggtgtagatg tttcccgcct gaacccagat
      121 cgggtcggga tcgaccgaca gcccaggata ccgatacgcc agctcgtggg cgtacttcca
      181 gtgcaccgtg gcccgctgat tggtcagtac gccggcccgc gccaagatga aggcggagat
      241 gcagaccgca cccacccggc ggcagccggg cacagtggtc ctgagccacc cggccagctc
      301 ctcgtctcgt tgattccggg tgctcactcc gcttaccagc agcaacgaat cgatctcgcc
      361 tgcagcgtcc ttgtagtacg cgtgggccaa cagcgagagc ccgctctcac cctggatcat
      421 gagatcgcga gtggtagaga ccacactgat gtcgtacggc gctcgacccg accgagccag
      481 ccgattggcg gtgctgagca cctgcaccgg accaaccagg tccaactcct cgatcggcgg
      541 aacggccagc acgacgactc ggcgacggac gctcatgccc gcaaatatgc cgcccggcgc
      601 cggaaggcct caaccatttg gccgaaaccg gcgggaagtc ggcagcttcg gttgcggcga
      661 ggagggtaga gtcagtcggt cagtcggtcg gacggtcagg cgggcaggcg gtgccaggtt
      721 agagaggagg gttggtgctt cgagtgatgg ttgttctcct tgcgctgcct gtcgcagcat
      781 gcggtgggca taccgtcagc attccgccgg cgccggacct gccggacagc atcgcgtctc
      841 cgccagacac cgggctcatt gccaaccggc ttcgactctc gactctcgac tctcgacttt
      901 cgactcatga cccgcgaccc gcgacccgcg acccgcgact cgtgactttc gactctcgac
      961 tttcgactcc tcatatattc ccaacctcac accctcaacc ccccatgcac ctgatccgag
     1021 acctcgagcg gactcgagat gaaaccctgc gctatttctc gctgcccgag actgagctcg
     1081 cgcgaacata cggtcccggt aagtggtcgg tccgattcat cctgctccac ctctcggaca
     1141 gtgagaccgt tctctatgac cgcattcgaa ggatcctcag cgaacgccgg caggtgatat
     1201 gggcgtacga ccaggacgcc tgggccagag gcctggatta ttcccaggtg cctgtcgttc
     1261 tcggccgacg gatctatgaa tcggttcgcg aggccgtgat ctacttcgcg ggccggttct
     1321 atgaggagaa gggcgccctc gagttcgtgc atagcgaaac cggagtgcgg accttgaagg
     1381 acgaattcga gaaagtcgcc tcgcataacg agcaccatct cgctcagatc cgcttggccc
     1441 tccgttccaa gccgtagtct tcgctccgtc cgcgtagtat ctctattcaa cgctgaaact
     1501 tcagtgctac gtttcgcgta ggaacgcccg cggtcaccta ctcgagcgag ctcgctatga
     1561 ccttcaagtc tccgcgatgg cagccgatcg cggtgctcct gagcgccgcc aacctggtcg
     1621 cggtcggctt tgcggctggt ggaggcgagg gcctgcacgc cggggtgcac gccgtgctgg
     1681 ccttggcatt cggcttgtgg gcccagcgcc tgatgcagcg ccccttggag atccggccgg
     1741 acgagcggct cgatgccttg gaagaggagg tcggcgacct ccgcagagag ctgggagagg
     1801 cgcaggagcg gctcgacttc gcagagcgcg tgctggtgcg gtcgcaggaa ggccggcggc
     1861 tcggccccga gagctaggat cgaagcaggc gatgcaaggc agtgccttac aggtcacctg
     1921 tatcggcggt cccactgcgc tgctccagct tggagggctc cggctcctca ccgaccccac
     1981 cttcgatcct gctggatccg agtacccgac gccgctctac acgctacaaa agctctctgc
     2041 ccccgcggtg tcgcccaagg ccatcggatc gctcgatgcg gtgctcttga gtcacgatca
     2101 ccacttcgac aacctcgatc gtactgggcg caccctgctg caatcggttc caaaggtcct
     2161 gaccacggcg ggtggcgcag agcgactgaa ccatgctgcg gtgggactca cgccaggaga
     2221 ccagcatatc ttgcgtgcgc cggacggacg gcagctgctg gtcactgcga cgccggcccg
     2281 gcacggaccg cctgagggag accgcggacc ggtcgtcggg ttcacgctcc actggaccga
     2341 tgcttccgac caggtcctgt acatctcggg cgataccgtc tggtacgatg gagtggctgc
     2401 gctcatgcgg cgggagccga tccgggttgc cttactgttc gctggcgcgg cacgggtggc
     2461 ggcagtgggg ccggcgcacc tgacattcac ggcggatgag ctggtagagg cggcacgcgc
     2521 gtgtcccgag gc
//
LOCUS       DASRPQ010001062         1099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3580772, whole genome shotgun sequence.
ACCESSION   DASRPQ010001062 DASRPQ010000000
VERSION     DASRPQ010001062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3580772"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1042)
                     /locus_tag="VFD73_12030"
     CDS             complement(<1..1042)
                     /locus_tag="VFD73_12030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74722.1"
                     /translation="MLTEAPKPGHLFDRDAEWRGLVSFAADARPGATLGVVSGRRRQG
                     KSYLLQALTAVAGGIYFPALEVTEAVSLRLFADELIRFTGAPVRPFRDWLEAIPYLFQ
                     LAAERPVPVIIDEFPFLVKASPALPSVIQRELGPGGSGSTSQARLLLCGSAMSVMGGL
                     LSGQAPLRGRAGLELIVQPFGYREAARFWGISDPRLAVLVHSVVGGTPAYRRELVRQD
                     APAGLADFDAWVTRTVLNPQTPLFREARYLLAEETEIRDPSLYHSVLAAVAEGNATSG
                     GIASYIGRKSNEVAHPLRVLEDCRLLIKEPDLFRSGRMRYRIVEPLVTFYQAIMSRDW
                     ARLEIGDGPTVWR"
BASE COUNT          218 a          369 c          349 g          163 t
ORIGIN      
        1 tgcgccacac cgtgggtccg tcaccgatct cgagccgggc ccagtcacgg ctcatgattg
       61 cctggtagaa ggtgaccagc ggctccacaa tgcggtacct catcctgccg gacctgaaca
      121 ggtcgggctc tttgatcagc agccggcaat cttcgagaac gcgcagcgga tgcgctacct
      181 cgttggactt ccggccgata tagctggcga ttccgccgga cgtggcgttt ccctcggcta
      241 cagcggcgag caccgaatgg tagagcgacg gatcgcggat ctcggtctcc tcggcgagga
      301 gatagcgggc ttcccggaaa agcggggtct gcgggttcag caccgtcctg gtcacccatg
      361 cgtcaaagtc agcaaggccc gcgggagcgt cctggcggac gagttcccgc cggtaggcgg
      421 gggttccgcc cactaccgag tggaccagca cagccagcct ggggtcggag attccccaga
      481 accgcgccgc ctcccggtag ccgaagggct ggacgatcag ctcaagcccg gcccgccccc
      541 gcagcggcgc ctgcccggaa agcaggccac ccatgactga catagcggag ccgcacagca
      601 gcagccgcgc ttggctcgtg gacccgctcc cgccgggccc gagctctcgc tggataacag
      661 aagggagggc gggtgatgcc ttcaccagga agggaaactc gtcgatgatc accgggacag
      721 ggcgttcagc ggcaagctgg aacaagtagg ggatggcctc tagccagtcc cggaacggac
      781 gaaccggcgc cccagtgaaa cgaatcagct catcagcgaa caaccggagc gagaccgcct
      841 cggtcacctc caaggcagga aagtaaatcc cgcccgcgac cgccgtcagc gcctgcagga
      901 gatagctctt gccctgccga cgccgcccgc tcaccacgcc aagcgtggca cccggacggg
      961 cgtcggcggc gaacgagacc agccccctcc attcggcatc ccggtcaaac aggtgacccg
     1021 gcttgggtgc ttctgtcagc atcgaagcat gcatagtcga agtttaattg accgaagtat
     1081 acttcggcca cctgaatcg
//
LOCUS       DASRPQ010001063         1177 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1701274, whole genome shotgun sequence.
ACCESSION   DASRPQ010001063 DASRPQ010000000
VERSION     DASRPQ010001063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1177
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1701274"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VFD73_12035"
     CDS             complement(<1..317)
                     /locus_tag="VFD73_12035"
                     /inference="COORDINATES: protein motif:HMM:NF015650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74723.1"
                     /translation="MVGGALADADPAWNRLLEYLLSARGFDFQGYKRASLARRIRKRM
                     DSVGVQSFGNYLEYLEAHPGEFNALFNVILINVTGFFRDPLAWDAVRTIAIPEILAGK
                     SPG"
     gene            complement(407..>1177)
                     /locus_tag="VFD73_12040"
     CDS             complement(407..>1177)
                     /locus_tag="VFD73_12040"
                     /inference="COORDINATES: protein motif:HMM:NF013502.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HZI74724.1"
                     /translation="CHLLLSNGSLRLTRGPKENGHRPAIDPLFRTASHSYGPRVVGVV
                     LSGNLNDGSAGLMAIKQRGGVAVVQSIETALYQGMPQSAIDHVAVDHVLSPPAIPLLL
                     AELVAQSVQPWKGPMSDDPELQQADEFALTDRHKQPGVPSTMTCPECHGTLWEVKDEE
                     LVRFRCRVGHAYSDEALLVHQGEQLEAALWTALRALEEHAALGRRLAARANSRGHTHS
                     ASAFTEQVMAAEHHASVIRVVLDRGIRTGEPTETMLVG"
BASE COUNT          213 a          369 c          376 g          219 t
ORIGIN      
        1 tcgccgggtg acttgcccgc gagaatttca gggatggcga tggtgcgcac cgcgtcccaa
       61 gcgagcgggt cacggaagaa gccggtaacg ttgatgagaa tgacattgaa gagggcattg
      121 aactcgccgg gatgtgcctc caggtactcc agataattcc cgaagctttg caccccaacg
      181 ctgtccatgc gtttgcggat tcggcgggcc agtgacgcgc gcttgtatcc ctgaaaatcg
      241 aacccgcggg cgctcaggag atactcgagc aaccggttcc acgccggatc ggcgtctgcg
      301 agtgctcctc cgaccaactc ggcgtggagg ggctcgccct catcgccggt gtactcggtg
      361 cccggaaggc ctgcttcgat ctcgtccaga gaggtctcct tcgtggttag ccgactagca
      421 tggtctcggt gggttcaccg gtgcgaatgc ccctgtccaa caccacccga atgaccgatg
      481 catgatgctc ggcggccatc acctgttcgg tgaatgccga tgctgaatgg gtgtggcccc
      541 ggctgttggc cctggcggcc agccgccgcc ccagagcggc atgctcctcc agcgcgcgga
      601 gcgccgtcca taacgctgcc tcgagctgct ccccctgatg caccagcagc gcttcgtcgc
      661 tgtaggcatg accgacccgg cagcgaaacc ggaccagctc ctcgtccttc acttcccaga
      721 gggtaccatg gcactcggga caggtcatgg tcgaggggac accaggttgt ttgtggcggt
      781 ccgtgagagc gaattcgtcg gcctgctgga gttccggatc gtccgacatg ggccccttcc
      841 acggctgcac cgactgcgcc accagctcag ccagcaggag aggaattgcc ggtggtgata
      901 gcacatggtc taccgccaca tgatcgatgg cactctgggg cattccctgg tagagagcgg
      961 tctcgatcga ttggacgacg gccacaccgc cgcgctgctt gattgccatc aaaccggcag
     1021 agccgtcgtt cagattgccg gacagaacca cgccgacgac ccgtggtcca tagctgtggg
     1081 aagcggtgcg aaagagcgga tcgatggccg gccggtgccc gttttccttg ggaccacggg
     1141 tcagccggag actgccgttg ctgagcagga gatgaca
//
LOCUS       DASRPQ010001064         3777 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3580917, whole genome shotgun sequence.
ACCESSION   DASRPQ010001064 DASRPQ010000000
VERSION     DASRPQ010001064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3777
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3580917"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            543..1370
                     /locus_tag="VFD73_12045"
     CDS             543..1370
                     /locus_tag="VFD73_12045"
                     /inference="COORDINATES: protein motif:HMM:NF025755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-transfer associated ATP-grasp
                     domain-containing protein"
                     /protein_id="HZI74725.1"
                     /translation="MAYIHERRNLADPFSNAGHYVPLHQLLERLATGDAGHGYIIKPE
                     DGWCGEDIILLTCREGQFYRRRGRDEEAFDFDRYMAGLEERARRERRDVSGVLIERRL
                     RQGAFWRALFPESANTIRLLTLWTLGEPAPFVARAVQRIGTADTVPTDNWSGGGISAP
                     VDLESGTLGVGRMHPLKGKRPEQRFARHPDTGTRIAGAVLPHWEGVVDAVLRAAASLP
                     FNRMAGWDVLVDSDGIPVILEANGNSDVNLLQVHGGLLAEPRIRRFYESYGVLAPAP"
     gene            complement(1383..2924)
                     /locus_tag="VFD73_12050"
     CDS             complement(1383..2924)
                     /locus_tag="VFD73_12050"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HZI74726.1"
                     /translation="MLDREEPRCKRAAVNKQFSKSSLISSTFSGVGTQYTGALITGLG
                     QVVVTAVLARLLTPRDYGLAGLAAVYVGLAAIFSQFGIGPALIQRAELTPRVIRAGFT
                     ATVLIGILTTAVVWITAPYAAEFFGNTALTPIIRGLSLTFLVANPGFVAEGMSERTLA
                     WRRLMWVEVAAFVLGYALPALVLAIRGYGVWAIVGSTLGQNLVRTVLLMRLQPHPKWP
                     RIGPEIRELLRFGGGFTLARAFNYGAGQGDNFVVGRVLGIVPLGYYSRSFKLMTILVT
                     YFAAIVTKVLFPIMSRLQGQVDRLRSTYLTGAAILGLVSAPLGAVMIVTAPELVGILL
                     GPKWAPSIVPFQILTAGIMMRNVYLMAYCLDGALGRMRYRTLRDGIYAMAVIVGSVIG
                     TRYGLNGVATGVVIAIGVNYFIGAGMSLHLLQSSWREYFESQAPAVLLGILSAVLAYT
                     IRLGLLSAGAHPIITLGGTAALTLALTGGLCWLQPAIAGKYGSAALRHLTSEIGARIP
                     WRETA"
     gene            2954..>3777
                     /locus_tag="VFD73_12055"
     CDS             2954..>3777
                     /locus_tag="VFD73_12055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74727.1"
                     /translation="MYREINTAAPVLPYFEYFRWDGKVDQLPSTLRKILGADGYQALQ
                     ARVRWLKHERKAHTGLPFTRKVEMWRRGFFAESAVIYDFPANDPRWYVTDYQHFCMGQ
                     RVNGWEGLYDHKLSLRALLLAKGLRQADTVAYIYEGKILVQPFSGGARYIEARELIDL
                     LREEGEGARWIVKPEDGLRGEGLFMLRYDTREFWVQRGRQVQEFDLEKFLEALPGTRG
                     EAGAMLIERRLEQGAFWRSLFPESANTLRLQTLWIPGEPEPFVARAVQRIGTVDTVP"
BASE COUNT          780 a         1150 c         1160 g          687 t
ORIGIN      
        1 gagccatctt ggcaccagtg gacgaaatgt ctctaggcat tcgagccatt ccgtcaccgc
       61 tgtacctgat gtcgaagccg tgacctcgct cactccatca aaagatcagt ggcccagatt
      121 aagcggttcg gattcaccgc tctttcaagg tttgcgctga tgatcacgtc tcaacaatcg
      181 tcgcagtcga acaacggtct cttaacccac tctctccagc catacggccg cataggcgcg
      241 gctctgagac aggccgatct gagactctac cagaccgcga ggtccagcta tcactgggcc
      301 aagcacgagc ggaaagctcg caccggtctg ccatttcaga ccaagctggc gatgtggcgt
      361 cgcggattct tcgctgaatc ggccaccatc tacgactttc ctcggaacaa tcctgcagag
      421 tatttgagcg attttcagca cttcgtgcgc tgcggccgga tcaatgcctg ggaggggatc
      481 tacactcgaa agctgggact ccgggcgatt ctgctcgcca tgggctttcg gcagccggaa
      541 ccgtggccta tatccatgag cgtcgcaacc tcgccgaccc cttctccaac gctggccact
      601 acgtcccgct gcaccagctc ctcgagcgcc tggcaacagg cgatgccggc cacgggtaca
      661 tcatcaaacc ggaagatggg tggtgcgggg aagacatcat tctcctgacg tgtcgagaag
      721 ggcagttcta tcgccgacgc ggacgggacg aggaggcatt tgacttcgac cggtacatgg
      781 ctggattgga agaacgggct cgccgggagc gccgggacgt cagcggagtt ctgatcgagc
      841 ggcggcttcg gcaaggcgct ttctggcgag cactcttccc cgagagcgca aacaccatcc
      901 gcttactcac gctctggaca ctgggcgagc cggcgccatt tgtggcccgc gccgtgcagc
      961 gtatcggaac cgccgacacg gtgcccaccg acaactggtc gggcggcggg atctccgcgc
     1021 cggtcgatct ggagtccggt actctgggcg tgggccgcat gcacccgctc aagggaaaac
     1081 ggccggagca gcggtttgct aggcatccgg ataccggcac cagaatcgcc ggcgccgtcc
     1141 tgccgcattg ggaaggcgtc gtggatgcgg tgctgcgggc cgcagccagc ctgcccttca
     1201 accgaatggc gggatgggac gtgctggtgg attccgacgg tatcccggtg attctggaag
     1261 cgaacggaaa cagcgatgtc aacctgctgc aggtgcacgg cggccttttg gccgagccgc
     1321 gtatccgtcg attctacgag tcctacggcg tgcttgcgcc tgcaccctga cgaatgctgg
     1381 acctacgcag tctctcgcca cggaatcctt gcgccgatct ccgacgtgag gtgtcgcagg
     1441 gcagcgcttc cgtactttcc cgcaatcgcc ggttggagcc agcagagccc gcccgtcaag
     1501 gccaaggtca gcgcagcggt accgcccaga gtgatgattg gatgggctcc tgccgagagg
     1561 agaccaagcc ggatggtata ggccaggacg gcgctgagaa ttccaagaag aacggctgga
     1621 gcctgagatt cgaagtactc ccgccaggac gattgcagga gatgcaggct catgcccgca
     1681 ccgatgaagt aattcacgcc gatggcgatc accactcctg tcgcgacgcc attcaatccg
     1741 tacctggtgc cgatgacact gccgacgatg accgccatgg cgtagatgcc atctcggagc
     1801 gtgcgatacc gcatgcggcc caaagctcca tccaggcagt aagccatcag gtagacgttc
     1861 ctcatcatga ttccagcagt aagaatctgg aagggaacga tcgaaggagc ccacttgggt
     1921 ccgaggagaa tcccgaccag ttccggggcc gtcacgatca tgactgctcc gaggggtgca
     1981 ctgaccaacc ccaggatcgc tgcacctgtg aggtaggtcg accgaagccg atcgacctgt
     2041 ccctgcaggc gggacatgat ggggaacagc accttggtaa cgatggcggc gaaatatgtc
     2101 accaggatag tcatcagctt gaacgacctg ctgtagtatc ccaggggaac aatgccgagg
     2161 actcgtccta ccacgaagtt gtcgccttga ccagcaccgt agttgaacgc gcgagccagc
     2221 gtaaagccgc cgccaaaacg aagcagttcg cgaatctccg gtccaattct gggccacttg
     2281 gggtgcggct gcagtcgcat caggagaacg gtccgaacca gattctgccc cagcgtgctt
     2341 cccacgatcg cccaaacccc gtagcccctg atagcaagga ccagcgccgg cagagcatag
     2401 cccagcacga aggcagcgac ttcgacccac atcaatcggc gccatgccag tgtccgctcg
     2461 ctcatcccct cagcgacaaa tccagggttc gccaccagaa aggtgaggct cagtccgcgg
     2521 atgattgggg tcagagcagt gttgccgaag aactcggctg catacggggc cgtgatccag
     2581 acaacggcgg tggtgagaat tccgatcaag accgtggccg tgaacccggc gcggataacc
     2641 cgcggcgtca gctcggctcg ctgaatcagg gcgggtccga ttccgaactg cgagaagatc
     2701 gctgccagtc ccacgtacac cgccgcgagt ccggccaggc cgtagtcccg tggcgtcagc
     2761 agacgggcca ggaccgcggt aaccaccacc tgcccgagac cggtgatcag tgctccggtg
     2821 tactgcgtcc ccacaccact gaaggtggag ctgatcaggg aacttttgct gaactgctta
     2881 ttcacggcgg ctcgtttgca gcgtggctcc tcacgatcga gcacctcgtt ctctattcga
     2941 tacaggcaag gcaatgtacc gcgagatcaa tactgccgca ccagttttac cgtacttcga
     3001 atatttccgc tgggacggaa aggtcgacca gctgccgtct acactccgca agatcctcgg
     3061 cgctgatggg tatcaggcac tgcaggcccg ggtgcggtgg ctgaagcacg aacggaaggc
     3121 acacaccggc ctgcctttca cccgaaaagt cgagatgtgg cgccgcgggt tctttgccga
     3181 atccgccgtg atttatgact ttccagccaa tgatccccgg tggtacgtca ccgactatca
     3241 gcacttctgc atgggacagc gggtaaacgg ttgggaaggg ctgtatgacc ataagctgag
     3301 cctgcgagct ctgctgctgg ccaaggggct gcggcaggcg gacacggtgg cctacatcta
     3361 cgaaggaaag atcctggtcc aaccgttcag tggtggagca cggtatatcg aggcccgaga
     3421 gttgatcgac cttctgcggg aggaaggcga aggggcccgc tggatcgtca agcccgaaga
     3481 tgggctccgt ggcgaggggc tgttcatgct acgctacgat acacgtgagt tttgggtcca
     3541 gcggggccgt caggtgcagg aattcgacct ggaaaaattc ctggaagctc ttcccgggac
     3601 gcgtggtgag gccggagcaa tgttgatcga gcgacgactg gaacaaggcg cgttctggcg
     3661 gtcgctgttt cccgagagcg ccaatacgct ccggctgcag acgctctgga tccctggcga
     3721 gcccgaacca ttcgtggcgc gtgcggtcca acggattgga acggtggaca cagtccc
//
LOCUS       DASRPQ010001065         1181 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2652691, whole genome shotgun sequence.
ACCESSION   DASRPQ010001065 DASRPQ010000000
VERSION     DASRPQ010001065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1181
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2652691"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..882
                     /locus_tag="VFD73_12060"
     CDS             <1..882
                     /locus_tag="VFD73_12060"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="vanadium-dependent haloperoxidase"
                     /protein_id="HZI74728.1"
                     /translation="NAIDRRFRPYTFDKRAEPGASPDAAVAAAARDVLVPLLDQLPRL
                     PFITQSCVDAGVASVEAAYTAALAALPDTPAKAQGIAVGKAAAAAILALRLTDAPAGP
                     FLNLSCPKDTPPGKYQCTPGFPFIAFELWEKVTPFVLQESAQFRPGPPYTVTDKAYTA
                     DFNEVKSLGGDGATTPSARTADQTQIALFWWESSPLKWGRIARAASANTRLDLWQNAR
                     LFGLLNMALADGYIAMVATKNHYNYWRPVTAIQGGETDGNPDTTVTGPGHRCARPPRI
                     RTTPLVTPSKGGPVLKC"
     gene            876..1130
                     /locus_tag="VFD73_12065"
     CDS             876..1130
                     /locus_tag="VFD73_12065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74729.1"
                     /translation="MLKQFFGNDRISFQDCGVTLPAGSTCSDPSPVLRSYNSFSQAAT
                     ENAYSRILIGFHFRKSVEAGTEYGRKIGERAVANYLQPVL"
BASE COUNT          221 a          398 c          342 g          220 t
ORIGIN      
        1 aatgccatcg atcgccggtt tcggccttac acctttgaca agcgggcgga accaggcgct
       61 tctccggacg ccgcagtggc ggcggcggca cgcgatgtcc tggtcccgct cctcgatcaa
      121 ctccctcggc tccccttcat cacccaatcg tgcgtcgatg cgggcgttgc aagtgtcgaa
      181 gccgcctaca ctgcggccct tgccgccctt cccgacactc cggccaaggc gcagggtata
      241 gccgtgggaa aggccgctgc ggcggcgatc ctcgccctga gactcacgga cgctcccgct
      301 ggaccatttc tgaatctcag ctgcccgaag gatactcccc ctggcaagta ccagtgcaca
      361 ccgggattcc cgttcatcgc ctttgagcta tgggaaaagg ttactccctt cgtgctacag
      421 gaaagcgcgc agttccgccc ggggccgccc tacacggtga ccgataaggc ctatacggcc
      481 gatttcaacg aagtgaaatc gctcggcggc gatggtgcca ccactcccag cgctcgcaca
      541 gccgaccaga cccaaattgc cctcttctgg tgggaaagct ccccgctgaa gtggggccgc
      601 attgcacggg ccgcctctgc caacaccagg ctcgacctct ggcagaacgc acggctcttc
      661 ggcttgctca atatggcgct agcggatggc tacatcgcca tggtcgcgac caagaaccat
      721 tacaactact ggcgaccggt cacggccatt cagggtggag aaacggacgg caatcccgac
      781 acaacggtga ccgggcctgg acaccgttgc gcccgacccc cccggatcag gactacgcct
      841 ctggtcactc catcgaaggg ggggccggtg ctgaagtgtt gaagcagttc ttcggcaatg
      901 accgtatcag cttccaggat tgtggcgtga cgcttcccgc tgggagcacc tgcagcgatc
      961 cgtcgccagt gctccgctcg tataacagct tctctcaagc cgcgaccgag aacgcgtatt
     1021 cgcgcatcct catcgggttc cacttccgca aatcggtcga agcagggacc gagtacggtc
     1081 gaaaaattgg cgagcgggcc gtcgctaact acctccagcc tgtgctctga gatgcggggt
     1141 ttcgccgccc ggtggaattg gtcggtcggt tcgctccgaa t
//
LOCUS       DASRPQ010001066         1342 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_442864, whole genome shotgun sequence.
ACCESSION   DASRPQ010001066 DASRPQ010000000
VERSION     DASRPQ010001066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1342
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442864"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..293
                     /locus_tag="VFD73_12070"
     CDS             <1..293
                     /locus_tag="VFD73_12070"
                     /inference="COORDINATES: protein motif:HMM:NF024743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HZI74730.1"
                     /translation="RIHMTTGSVTMQGAVMANASVDISVSTGDVNLQLPADTAAQLDA
                     HTNLGAIHISGWPMQTTRINSLGEDAEGPLGAQPAGAIHVRVDSGDITVGQI"
     gene            complement(439..882)
                     /locus_tag="VFD73_12075"
     CDS             complement(439..882)
                     /locus_tag="VFD73_12075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74731.1"
                     /translation="MFEVMNCCSAEASVLTTLIKIHEDTAPVILAAGGITLIWGIVVL
                     VLARGRTSGQGGVWMPLRIFRILLSITAALGLVQAILGGLLWLQGARPGEGLHYVYGG
                     IVLLAIPVAYVYSDQNQVRRDIIIMVIAVVAVVGAAVRALMTGQP"
     gene            complement(1057..1260)
                     /locus_tag="VFD73_12080"
     CDS             complement(1057..1260)
                     /locus_tag="VFD73_12080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74732.1"
                     /translation="MFDPDLLIELSHEQQRDIDRKAELARMMQEGRESQPALPERVLL
                     AVADVLIAAGERMREGHPAPAAH"
BASE COUNT          277 a          438 c          414 g          213 t
ORIGIN      
        1 cacgcatcca tatgacgaca ggttccgtga cgatgcaggg cgccgtgatg gcgaacgcct
       61 ccgtcgacat ctcggtcagc accggcgacg tgaaccttca gctgcccgcg gacaccgccg
      121 cccagctcga cgcccacaca aacctcggag ccattcacat cagcggctgg ccgatgcaga
      181 ccactcgcat caacagcctc ggcgaggatg cggagggtcc actgggcgcg cagccagcgg
      241 gcgccattca cgtccgggtc gatagcgggg acatcaccgt aggccagata tagcgcagac
      301 ccatctgggg tttcggccac cctcccctag gagaggaggg cataggcgac cagagtggcg
      361 aagggccacg gctctggctc ccctcctctt taggggaggg gttgagggag gggctggggg
      421 agagggtctg gaaatagtct acggctgccc cgtcatcagc gcgcggacgg cggcgccgac
      481 caccgcgacg accgcgatca ccataatgat gatgtcgcgg cgcacctggt tctggtcgct
      541 atagacgtac gccaccggaa tcgccagcag cacaatgccg ccgtagacat agtgcagccc
      601 ctcgcccggg cgcgctccct gaagccacaa caggccgccc aggatcgcct ggaccaaccc
      661 gagcgccgcc gtgatcgaga gcaggatgcg gaagatgcgc agcggcatcc agacgccgcc
      721 ctggcccgat gtacggccgc gagccagcac cagcactact atcccccaga tcagcgtaat
      781 cccgccagcc gccagaatca ctggcgctgt gtcctcatga atcttgatga gcgttgtgag
      841 cacagaagcc tccgcggaac agcagttcat cacctcgaac aaaaccgatg agttctgcgt
      901 tggactatac cgttcctcgc cacctccggg caactggcat gcgtctcaga tccgtctcac
      961 acgcccgaag attggcggat cgaagcgaca acaatgccct tctccacgag ggatgaaggg
     1021 cgaagagttg tccattgagg cgtagtgtgc catgggctag tgcgcggcgg gcgcgggatg
     1081 tccctcgcgc atccgctcgc cagcggcgat caggacatcg gcgaccgcca gtagcacgcg
     1141 ctctggcagg gctggctgag actcgcggcc ctcctgcatc atacgggcaa gttcggcctt
     1201 gcggtcaatg tcgcgctgct gttcgtggga taactcgatc aacagatcgg gatcaaacat
     1261 gggtcactcc tccgatatgg gccggtcagc caactagccg accgggtgaa ctgccaacac
     1321 atgactggga tacgaagtat at
//
LOCUS       DASRPQ010001067         1288 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3581323, whole genome shotgun sequence.
ACCESSION   DASRPQ010001067 DASRPQ010000000
VERSION     DASRPQ010001067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1288
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3581323"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..755
                     /locus_tag="VFD73_12085"
     CDS             <1..755
                     /locus_tag="VFD73_12085"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HZI74733.1"
                     /translation="VREIRLRSRNIILALDISSSMKAGDFQPDNRLSVARKVVTDFVG
                     RRQGDLVGLVLFAGRAFLQAPLTPDLSLLQKVLKRVDIGMLPDGTAIGTALALSLNQL
                     KDLPVKASTIVLITDGANNTGQPTPLVAAEAARTLGVRVQAVGLSSRDTTSVPLNGVW
                     RVGNTAPRLTGRDEAALERMAERTGGHYYRATDPAALDKIMGDIDRLERSNVHVGEIR
                     DYRELYGYLLLPALIVLALELGLGATWLRSLP"
     gene            752..>1288
                     /locus_tag="VFD73_12090"
     CDS             752..>1288
                     /locus_tag="VFD73_12090"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HZI74734.1"
                     /translation="MSGLSFASPVYLLVLLVLLPAGIVVMTRLQRWRRETLGEYGDAA
                     LLPESSPLPSRRRQTTRVGLGLGAVALLLLALARPQYGEREIGTGNSGRDLLVLLDLS
                     RSMNAADGGTARLALAKRTISDLLAASPHNRVGLVVFGGSAFLQLPLTTNYAAFERYL
                     AAATTDDLGDPGTDLGNAL"
BASE COUNT          213 a          419 c          418 g          238 t
ORIGIN      
        1 aggtccgcga gatccggctt cgctcccgaa acatcatcct cgctctggat atctccagca
       61 gcatgaaggc gggagacttt cagccggaca accggctctc ggtggcccgg aaggtggtga
      121 ccgattttgt cggccggagg caaggtgatc tggttggact ggtcctgttc gccgggcgag
      181 cattcctcca ggcgccgctc actcccgatc tcagcctgtt gcagaaagtg ctcaagcggg
      241 tggatatcgg catgctgccg gacggcaccg ccattggtac cgcattggcg ctcagcctca
      301 accaactcaa ggacctgccg gtcaaggcca gtaccatcgt tctgatcacc gacggcgcca
      361 acaacaccgg ccagccgact ccgctggttg ctgccgaggc agcgcgtacc ctgggggtaa
      421 gagtacaggc agtaggcctc agcagccgag atacaaccag tgttcccctg aacggagtgt
      481 ggcgagtcgg aaatacggcg cctcggctca ccggacggga tgaggcggcg ctggaacgga
      541 tggctgaacg caccggcgga cactactacc gcgcgaccga tccggcggct ctcgacaaga
      601 tcatgggcga catcgaccgc ctggagcgct cgaacgtcca cgtgggagag atccgggact
      661 accgcgagct ctatgggtat ctcctgctgc cggcgctcat cgtcctggcc ctggagctgg
      721 gacttggcgc cacctggtta cggagtctcc cgtgagcggt ctgagctttg cctctccggt
      781 ttatctcctg gtgctgctcg tccttttgcc ggcaggaatc gttgtcatga cgcggctgca
      841 gcgctggcgt cgcgagacgc tgggagaata cggggacgcg gctctcctgc cggaatcatc
      901 gccgcttccg tcccggcgcc gccagactac gcgagtcggg ctcgggcttg gtgcggtggc
      961 cctgctgctc ctggcccttg cccgtccgca atatggcgag cgcgagatcg ggacggggaa
     1021 cagcgggcgt gatctcctgg tcctgctcga tctttcccgc tccatgaatg cggccgatgg
     1081 cggcaccgct cgcttggcgc tcgccaagcg aacgatcagc gacctgcttg ccgcatcgcc
     1141 gcacaaccgg gtggggctcg tcgtgttcgg agggagcgcc ttcctgcagc ttccgctcac
     1201 gaccaactac gcggcgtttg agaggtacct ggctgccgcc acgaccgacg atctgggaga
     1261 tcccggcacc gacctgggca atgctctg
//
LOCUS       DASRPQ010001068         1545 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3581384, whole genome shotgun sequence.
ACCESSION   DASRPQ010001068 DASRPQ010000000
VERSION     DASRPQ010001068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3581384"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..418
                     /locus_tag="VFD73_12095"
     CDS             <1..418
                     /locus_tag="VFD73_12095"
                     /inference="COORDINATES: protein motif:HMM:NF024790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M50 family metallopeptidase"
                     /protein_id="HZI74735.1"
                     /translation="SIAFVGYLGPSAFGLGAAKLIELGDIAVMLWGALFLLGILLLAL
                     RWSFGFITVILAGGLVFLIARCTPMQTQVVAAYAIAWLLLVSGVRRIVEVGIESDDGK
                     LLTGLTFIPRLIWSLLWLAGSIAAVVVGGKLLVMGT"
     gene            complement(644..1069)
                     /locus_tag="VFD73_12100"
     CDS             complement(644..1069)
                     /locus_tag="VFD73_12100"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain nuclease"
                     /protein_id="HZI74736.1"
                     /translation="MAAVARYLADTSALARLHHPEVAAILAPLIESGVVGTCGVIEFE
                     LGWAIRSSTEFDQVRADRDAGYEWLATHDQDWRRALHVQAALWRGGQMRAVGLSDLLI
                     AAVAERERVTVLHYDGDYDLIAQITGQPVQWVVPRGTVT"
     gene            complement(1057..1266)
                     /locus_tag="VFD73_12105"
     CDS             complement(1057..1266)
                     /locus_tag="VFD73_12105"
                     /inference="COORDINATES: protein motif:HMM:NF021474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapB family
                     antitoxin"
                     /protein_id="HZI74737.1"
                     /translation="MTKTLIEIDDEYLAAAQQALGTATKKDTVNAALREVTALAARRR
                     DLHRLTSRGLPDLEDEDVMRAAWQR"
BASE COUNT          234 a          506 c          478 g          327 t
ORIGIN      
        1 cagcatcgct tttgtcggct acctcggccc gagcgcgttc ggcctcggcg cggcgaagct
       61 catcgagctt ggcgatatcg cggtgatgct ctggggggcc cttttcctgc tcgggattct
      121 gctgctcgcg ctgcgctggt cgtttggctt catcaccgtc atcctcgcgg gcggcctggt
      181 attcctcatt gcccgctgta cgccgatgca gactcaggtc gtcgcagcat acgcgatcgc
      241 ctggttgctg ctggtgtctg gggtgcgcag gatcgttgag gtaggcatcg agtccgatga
      301 cggaaaacta ctgacgggtc tcaccttcat cccacgcctc atctggtctt tgctctggct
      361 ggcgggctcg atcgcggcgg tcgtcgttgg tggcaagcta ttggtcatgg gcacctgaat
      421 gcgtttcctg catcgatagg tgaccaagct ttcctgcgga tgcttacatc ggggacccca
      481 acgcggcccg cgtagcctgc ctttatcgag cttcagccct gacagcggct gtccttacat
      541 cattggcgtc agcagcccga ctttgcgtag cctctgaccc tggccggggg cactctcatg
      601 ccgcgtgtag ttcgttgacc gaactgagct tcccgccttg gggtcaagta accgttccgc
      661 gaggtacgac ccattgcacc ggctggccag tgatctgcgc gatcaggtcg tagtcgccgt
      721 cgtagtgcag gacggtgacg cgttctcgtt cggccactgc cgcgatcagc aggtcggaca
      781 ggccgaccgc ccgcatctgc ccaccgcgcc acaaggcagc ctggacatga agggcacgcc
      841 gccagtcctg atcgtgggta gccagccact catagccggc atcgcggtcg gctcgcacct
      901 gatcgaactc cgtgctgctc cggatcgccc atccgagttc gaactcgatg acaccgcagg
      961 tgcctactac tcctgactcg atcagcggtg caaggatcgc tgccacttcg ggatggtgca
     1021 ggcgggcgag cgcgctggtg tcggccaggt agcgtgctac cgctgccatg cggcccgcat
     1081 cacatcctcg tcttctaggt cgggaaggcc gcgggaggta agcctgtgca ggtcacgccg
     1141 ccgggcggcc agcgcggtga cctcgcgcag ggcagcgttg accgtgtcct tcttggtcgc
     1201 ggtgcccagt gcctgctggg cagccgcgag atactcgtcg tcgatctcga tgagggtctt
     1261 ggtcatggct gcctccttca ccaccaatat atcccagaag gctctaccca tatatattca
     1321 cgtgcgccgc cgggggacgc cagaatcggg aaggcctgca gctctatcgc gccgcgaggt
     1381 gcggagcagc acagtcagta catgatgacc ttcagcgacc tggcctctgt gccttcccat
     1441 cccctggtgc cgttcactga ccagctgcgg ctgacagtgg ctgcctacct ggcccgcttc
     1501 aagggctcct cccgtgagca caccgaatcg gacctgcgct gctac
//
LOCUS       DASRPQ010001069         1150 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_757560, whole genome shotgun sequence.
ACCESSION   DASRPQ010001069 DASRPQ010000000
VERSION     DASRPQ010001069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_757560"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="VFD73_12110"
     CDS             <1..235
                     /locus_tag="VFD73_12110"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZI74738.1"
                     /translation="VAAAGLNPDDWTPREMRHSFVSLLSDAGLPVEQISRLVGHSRTA
                     TTDTVYRKQIRPVIVHGAEVMDRIFPTGTDPNA"
     gene            complement(282..452)
                     /locus_tag="VFD73_12115"
     CDS             complement(282..452)
                     /locus_tag="VFD73_12115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74739.1"
                     /translation="MRLFRGRAGKDGEKAAAGLLKEQARTVKAQPVVAPREVKREARP
                     DPDKPGWGRAIG"
BASE COUNT          178 a          383 c          362 g          227 t
ORIGIN      
        1 cgtcgcggca gccgggctca accctgacga ctggacgccc cgcgaaatgc ggcacagctt
       61 cgtctcgctg ctttccgacg ctggcttgcc ggttgagcag atctctcgcc tggttggaca
      121 cagcaggacc gcaaccaccg atacggtcta ccgaaagcag atccggccgg tcatcgtgca
      181 cggcgccgaa gtcatggacc gaatcttccc aaccgggact gacccgaatg cttagttact
      241 gtcaagttcc ggtacccggg cgacagcgga gttccggttt cctagccgat ggcccggccc
      301 catcctggct tgtccgggtc aggacgtgcc tcgcgcttca cttcccgggg ggcaaccacc
      361 ggctgtgcct tgaccgtcct ggcctgctcc ttcaggagcc cggccgccgc cttttcgcca
      421 tccttcccgg ccctgccgcg aaagagacgc atagctctac gaaagagatc catagccgga
      481 tcataggatg tcggcttgcg gacttctcgc atcccagggg gcagatcagt cggcatgtcc
      541 aagtgtttcg tgcgcacaga ggcggtcgga cgagtggccc ggctgcgagt accgcgatga
      601 ccggcaggcc gaccgccgtt gctgccgccg ctgataccca ggggtcatgg atctcgcgga
      661 tgccagggcc gtcgatggga atgcttagtt actcggcccc ggccgcgagc cggtccgctg
      721 tgggctgtat gccttgtcac ctggtcgggg tggccggatt tgaaccggcg gcctcttcgt
      781 cccgaagcca agttcacggg tcgctgtgct gggcagtcgc gtgtccagcc tgggcttgag
      841 tgtccgccaa cgttcgctgg tgtgcgtggg tgtgcgtggc gatcgtcact cagttggtca
      901 ctcagcccag cctccgggcc ccaacgctgg cctgtctgtt aacgggggtt agccgaacgc
      961 ctgccgagga ggcctccttc ctgttcctaa catcagccgg atggggcgtt cggccggact
     1021 ttctcaccca attcggctag cagcgtgtcg atcggcatgg cgaacccggt aacttcccgg
     1081 agcttaccga gcacccctcc cggaaggtgc tcccctccgg ggtctctgtg accgagcatt
     1141 agaacggcca
//
LOCUS       DASRPQ010001070         2735 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1701996, whole genome shotgun sequence.
ACCESSION   DASRPQ010001070 DASRPQ010000000
VERSION     DASRPQ010001070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2735
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1701996"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            284..577
                     /locus_tag="VFD73_12120"
     CDS             284..577
                     /locus_tag="VFD73_12120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74740.1"
                     /translation="MFQKPQLFRFPEPLGVIEAYDTAHPEPRTLASFFPQLRNASCKG
                     SLRPAWANAAFSTLGRFGCGHHDVVVNVADQDIEPAEFLWRMMWARYDASTTT"
     gene            574..1479
                     /locus_tag="VFD73_12125"
     CDS             574..1479
                     /locus_tag="VFD73_12125"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HZI74741.1"
                     /translation="MTTKDHSLATVYSARMERRQLEYFLAVVEHGGFTNAARAMYVAQ
                     PSLSHAIAALEAELGGALFHRLPHGAVPTAAGEALIVPARQVTRDLSTAAATVREVLG
                     LSGGRLDIVAQTTFAVDPLSGLLGEFLRSHPRVAVRVTDPEQATQVGHLVRSGDCELG
                     LVDATVPCGDLESLLLGDLTLHLVLPPGHAWHREVGLADLATLRFVATPQGTATRGVL
                     DEALRQIGLAPEIAVETTHRAMIVPLVLEGAGAALLPKSMAADAGVKGAVVVTTEPPL
                     RYSARLVWRSGPLSPAAAGFVALAR"
     gene            1659..>2735
                     /locus_tag="VFD73_12130"
     CDS             1659..>2735
                     /locus_tag="VFD73_12130"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI74742.1"
                     /translation="MQGEIFVSFAVVDEAPLGRFHYKLAAACSGGPLLDGYLLAIVGI
                     ALPGITTEMEISTTTEATLGVAALIGMFFGGLIFGPITDRIGRKTMYTLDLLVLIVGS
                     VLSIFVTDAWQLIILRFVIGAAIAADYPIATSLLTEWLPRRQRGQMFTWVIIIWYVGA
                     ALAYLVGYVMIETVGNDGWRWMLASGAILAAVVFLLRLGTPESPRWLVAVGRIDEAAR
                     VVEHTLGIPVATEELSGMVPQPGEARGSITALFRGIYLRRMAFVVIFFSCAIVPLFAL
                     LTFGPKLLEALGFGSGNLANLGTAIINLVFAIGCLPAMRLLETAGRRKTIVWSFALMV
                     LPLLALGIWGHAPAVVVVLFFCMYA"
BASE COUNT          443 a          820 c          900 g          572 t
ORIGIN      
        1 gcgaccgcac ccaactgttg ctccagagcg gttacagtca agcaatagcc cagttgggtc
       61 gattggcact gcagactccg tatcgttgtt tggtcgcccg gggtgtcgaa ctggtgcgct
      121 gcccgcctgc tggacgagta cccagacagc gacggcgtcc gggtgctgtg ggcgactcgc
      181 gagcgtgacc caggcggact ggctcccttg cgtcatatgc tgcacatggc tgtcacgcca
      241 tgccctgtct gggtagaccg gcagtgggta tcgtcggcgg gttttgttcc agaagccgca
      301 actcttcagg tttcccgaac cgctcggtgt catcgaggca tacgacaccg ctcatccgga
      361 gcccagaacg ctggccagct tcttcccgca gttgaggaac gcgagctgta aaggctccct
      421 gcgcccggcc tgggctaacg cggcattctc gacgctgggt cggttcggat gcggccatca
      481 cgacgtcgtg gtgaatgtcg ccgaccaaga tatcgagccc gccgagttcc tgtggaggat
      541 gatgtgggcc cggtacgacg cctcgaccac cacgtgacca ctaaagatca ctcactcgca
      601 acggtctact ctgcccgcat ggagcgccgg cagttggagt acttcctcgc cgtggtggaa
      661 cacggcgggt tcaccaatgc agcgcgggcc atgtacgtgg cgcaaccgtc gctgtcgcat
      721 gcgatcgccg cgctggaggc agaactgggc ggggcattgt tccaccggtt gccgcacgga
      781 gccgtaccga cggcagccgg cgaggcgctc atcgtccccg cccgccaggt gactcgggac
      841 ctgtccacgg cggcggcgac ggtgcgagaa gtcctcgggt tgtccggtgg ccggctggac
      901 atcgttgccc agaccacctt cgcagtggat ccgctttcgg gattactggg cgagttcctg
      961 cgcagccatc caagggtcgc cgtccgggtg accgatcccg aacaggcaac gcaggtgggc
     1021 cacctggtac gcagcgggga ttgtgaactc gggttggtgg acgcgacggt gccctgtggg
     1081 gacctggagt cgctgttgct cggcgatctg acccttcacc tggtgttacc accgggacat
     1141 gcctggcacc gagaggtcgg tctggctgac ttggctacgc tgcggttcgt ggcgaccccg
     1201 cagggcacag cgacgcgcgg cgtgctcgat gaggccctac ggcaaatagg gctcgcaccg
     1261 gagatcgcgg tggaaaccac gcaccgggcg atgatcgtgc cgctcgtcct cgaaggtgct
     1321 ggggccgccc tgcttccgaa gtcgatggca gcggacgcgg gcgtgaaggg cgcggtggtg
     1381 gtgacgaccg aaccgccgct tcgctactcc gcccgcctgg tgtggcgatc gggaccgctt
     1441 tcgccggctg ccgcagggtt cgttgcgctg gcgcgctgag atcgtcgggc tccccatcag
     1501 cggccgtcgc ccatagaaca tgtgaatggg accaatcgaa aagcggtctc ggcccgaccc
     1561 ctgaaggtca ttccctgacg catcatcacg tgcaactgtg atatccgaca cacggatagc
     1621 gggagcactg agtcagagtc atcagcgtcc taattcgaat gcagggagaa atcttcgtga
     1681 gtttcgctgt tgtcgatgaa gcccctttgg gcagattcca ttacaaatta gcggccgcat
     1741 gcagtggggg gccgttgcta gatgggtatc tgctggccat cgtaggtatc gcgctaccag
     1801 ggatcaccac tgaaatggag atttcgacca ccaccgaagc gacactcggc gtggcggcgc
     1861 tgatcggaat gttcttcggt gggctgatat tcggcccgat caccgatcga atcggccgca
     1921 agacgatgta caccctcgat ctgttggtgt tgattgtggg atcggtgtta tcgatattcg
     1981 tcaccgatgc ctggcagctc atcattttgc gatttgttat cggtgcggcg atcgctgctg
     2041 attacccaat tgccacctcc ctgctcaccg aatggttacc gcgccgccag cgtggccaaa
     2101 tgttcacctg ggtgatcatc atctggtacg tcggggctgc gctcgcctat ttggtgggct
     2161 acgtgatgat cgagaccgtc ggaaacgacg gctggcgttg gatgctggct tccggggcga
     2221 tcctggcggc ggtggtgttc ctgctgcgct tgggtacccc tgaatcgccc cgttggctgg
     2281 tcgcagtcgg tcgcatcgac gaggctgccc gcgtggtcga acacactctg ggcattccgg
     2341 tggcgaccga ggaactgtca gggatggtgc cgcagccggg ggaagctcgc ggcagcatca
     2401 cagcattgtt ccgtggaatt tatttgcgcc gcatggcctt tgtggtcatc ttcttcagct
     2461 gcgcgatcgt cccgctgttc gccttgctga ccttcgggcc caagctgctg gaagcgctcg
     2521 ggttcggcag cggaaacctc gccaatctgg gtactgcgat catcaacctg gtgttcgcca
     2581 tcggatgtct gcccgccatg cgactgctgg agacggcggg tcggcggaag accatcgtct
     2641 ggtcgtttgc actcatggtg ttgcccctct tggcccttgg gatatggggt catgcgcctg
     2701 cggtggtcgt ggtgttgttc ttctgcatgt atgcg
//
LOCUS       DASRPQ010001071         2378 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3581680, whole genome shotgun sequence.
ACCESSION   DASRPQ010001071 DASRPQ010000000
VERSION     DASRPQ010001071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2378
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3581680"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..883)
                     /locus_tag="VFD73_12135"
     CDS             complement(<1..883)
                     /locus_tag="VFD73_12135"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HZI74743.1"
                     /translation="MNILLVNWQDRANPHAGGAEIHLFEIFGRLASQGHRIRLVCSGW
                     QGAPGRATLEGISIERHGDRHTFALLGRRAAHRAIQRERPDILVEDVNKLPLFLALGS
                     RVPVCAIVPHLFGTTAFAEASWPVAAAVWASERPLARGYRRAGFHAISESTRDDLIAR
                     GVPPEHIRVIHPGVDSRHFTPGPPGRRSTVPTFLYVGRLKRYKGIAFAIEALAIARQQ
                     RADLRLEIAGTGDYRGELERLVARHNLEKAVTFHGFVSEERKIDLLRWAWANIFPSPK
                     EGWGITVIEAAACGTPSL"
     gene            complement(901..1314)
                     /gene="nusB"
                     /locus_tag="VFD73_12140"
     CDS             complement(901..1314)
                     /gene="nusB"
                     /locus_tag="VFD73_12140"
                     /inference="COORDINATES: protein motif:HMM:TIGR01951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HZI74744.1"
                     /translation="MLRIETKSRARALQILYAWELQGSPPVPRVASGLARLTGPEPRI
                     LDRAEALASGVVAEIDALDAHAASASENWRMSRMAVVERNILRLGIHELRRGEVPPKV
                     AIDEAVHLAHWFGDARAPGFVNGILDGIARTLGRL"
     gene            complement(1301..1780)
                     /gene="ribH"
                     /locus_tag="VFD73_12145"
     CDS             complement(1301..1780)
                     /gene="ribH"
                     /locus_tag="VFD73_12145"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: protein motif:HMM:NF013081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HZI74745.1"
                     /translation="MPDFSGRLHASGRVGILVSRYNEVITTKLLDGALACCKEAGIPR
                     DSIDVVWIPGAFELPVAAAAAADTGAYSCLVALGAVIRGDTSHFEYVAGEAARGLRQV
                     SILHRLPIGFGVLTVDTLQQATERAGGGAGNKGYEAASAALRTADVLSQLKARHAPD"
     gene            complement(1785..>2378)
                     /gene="ribA"
                     /locus_tag="VFD73_12150"
     CDS             complement(1785..>2378)
                     /gene="ribA"
                     /locus_tag="VFD73_12150"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HZI74746.1"
                     /translation="ERLVHRVAEARIPTEFGEFTIIGYRNDVDRAEHVALVHGEIAGE
                     PNILVRMHSKCLTGDVFGSRRCDCGVQLHRAMELIAREGKGAVVYLDQEGRGIGLLNK
                     LRAYALQDSGADTVQANERLGFAPDLRNYGIGAQILRDLGLSSIRVMTNNPRKLIGLE
                     GYGLEIVERVPLVTTPDQENRTYLQVKRDKLGHLFTH"
BASE COUNT          431 a          782 c          760 g          405 t
ORIGIN      
        1 ccagcgatgg agtcccgcat gcggccgcct cgatcacggt aataccccag ccctctttgg
       61 gcgacggaaa aatattggcc cacgcccagc gcaggagatc gattttccgc tcttcgctaa
      121 cgaagccgtg aaaggtgacc gccttctcca gattatgtct cgcgaccaga cgctccagct
      181 cgccgcgata gtctccggtt ccggcgatct ccagacgcag gtcggctcgt tgttgccggg
      241 cgatggccag ggcttcgatc gcgaatgcta ttcctttata acgcttcagc cgtccaacat
      301 acaagaacgt cggaacggtg gaacggcgcc ccggcggtcc cggagtaaag tggcgactgt
      361 ccacccccgg atggatcacc cggatgtgtt ccggcgggac cccgcgggcg atgaggtcgt
      421 cacgggtgct ctcgctgatg gcatgaaagc ccgcgcgccg gtatccgcga gcgagcggcc
      481 gctccgaggc ccagaccgcc gccgccaccg gccacgaggc ctcggcgaat gcggtcgtgc
      541 cgaaaaggtg gggcacgatg gcacagaccg gcactcggct tcccagggca agaaagagtg
      601 gaagcttgtt gacatcctcc accaggatat cgggacgctc gcgctgaatc gcgcggtgag
      661 ccgcccggcg gcccagcagg gcgaaggtgt gtctgtcgcc atgccgctcg atgctgatgc
      721 cctcgagcgt ggctcggccc ggcgccccct gccaccctga gcagaccagc ctgattcggt
      781 gtccctggga cgccagccgg ccgaagatct cgaagagatg gatttcggcc ccgccggcat
      841 ggggattcgc gcgatcctgc cagttgacca ggagaatgtt cacgcagtgt gtgggagcac
      901 ctacagccgc cccaacgtcc gggcgatgcc atcgaggatt ccgttcacaa acccaggggc
      961 ccgtgcatcg ccgaaccagt gcgccagatg caccgcctcg tcgatggcga ctttgggggg
     1021 aacttctccg cggcggagct cgtgaatccc cagccggaga atattgcgct ccacgacggc
     1081 catccggctc attctccagt tctccgaggc actggcagcg tgggcatcga gagcatcgat
     1141 ctccgccaca acgcccgagg ccagcgcttc ggcccgatcc agaatccgcg gctcgggacc
     1201 ggtaagcctg gcgagaccgc tggcgacacg aggaaccgga ggagatccct gcagctccca
     1261 ggcatagagg atctgcagcg ctcgggctcg gctcttggtc tcaatccgga gcatggcgag
     1321 ctttcaactg ggagagcacg tcggcggtgc ggagcgcggc cgacgcagct tcgtatcctt
     1381 tgtttcccgc ccctccgccg gcccgctcgg tggcctgctg caaggtgtcc accgtcagca
     1441 ccccaaaacc tatcggcagc cggtgtagta tcgagacctg gcgcagcccg cgggcggctt
     1501 cgccggccac atactcgaag tgcgaggtgt cgccccgaat cacggcaccg agtgcgacaa
     1561 ggcaggaata tgcgccggta tcggcggcag cggcggcagc caccgggagc tcaaaagccc
     1621 ccggaatcca gaccacgtcg atagagtcac ggggaatgcc cgcctctttg cagcaggcga
     1681 gcgcgccatc gagcagcttg gtggtgatca cttcgttgta gcggctgacc agaataccca
     1741 ctcgccccga ggcatgcagg cggccggaaa agtcgggcac cgggtcagtg ggtgaagagg
     1801 tggcccagct tgtctcgctt gacctgcagg taggtgcggt tctcctgatc gggagtggtg
     1861 acgagcggga cccgctccac gatctcgagg ccgtagccct caagtccaat gagcttccgg
     1921 ggattgttgg tcattaccct gattgaagag agtccgagat cacgcaggat ctgggcgcca
     1981 ataccgtagt tcctcaagtc cggggcaaag ccgagccgct cgttggcttg caccgtgtcg
     2041 gctccgctgt cctgcaaggc gtaggcgcgc agcttgttca gaagtccaat cccccggccc
     2101 tcctggtcga ggtagaccac cgcacccttt ccttcccgcg cgatcagctc catggcccga
     2161 tgcagctgca cgccgcagtc gcagcggcga gacccgaaga cgtcgccggt gaggcacttc
     2221 gagtgcatcc gcacgagaat gttgggttct ccggcaatct ctccgtgcac cagggcgacg
     2281 tgctcggcgc gatcgacatc gttgcgatag ccgatgatgg tgaattcgcc gaactcggtg
     2341 ggaattctcg cctctgcgac gcggtgaacc agacgctc
//
LOCUS       DASRPQ010001072         1271 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2653418, whole genome shotgun sequence.
ACCESSION   DASRPQ010001072 DASRPQ010000000
VERSION     DASRPQ010001072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1271
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2653418"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..572)
                     /locus_tag="VFD73_12155"
     CDS             complement(<1..572)
                     /locus_tag="VFD73_12155"
                     /inference="COORDINATES: protein motif:HMM:NF014816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HZI74747.1"
                     /translation="MIDLYAMYSPNAVRIFMALEEFGLPYQVRPVDVFSGQQFDPAFR
                     KLNPIAKVPVIVDHDGPGDKPYTVFESAAILLYLTDKTGKLLPADKAAHFEAVQWLIQ
                     GVTALGPMCGQYFHFLRFAPAGNEYAVSRYRTQVHRAFDVAEERLGQVPYLGGSDFSI
                     ADIAWLPWARFLPAMLGAAGAEKFPKVTEWA"
     gene            complement(740..961)
                     /locus_tag="VFD73_12160"
     CDS             complement(740..961)
                     /locus_tag="VFD73_12160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74748.1"
                     /translation="MRISKEALALSVVVRRIHIGATPFGWEVHCTGASRPVQVSAERF
                     RSMEAAYQAGLACLTDLIVKRPRSSPEAA"
BASE COUNT          242 a          407 c          388 g          234 t
ORIGIN      
        1 gcccactccg tgaccttggg gaacttctca gcgccagccg caccgagcat cgcaggcagg
       61 aatcgcgccc atggcagcca cgcgatgtcg gcgatcgaaa agtcgctgcc gcccagatac
      121 ggcacctgtc ccagccgctc ctcggccacg tcaaaagccc ggtgaacctg cgtgcgatag
      181 cggctgacgg catattcatt ccccgccggg gcaaagcgca ggaagtggaa atactgcccg
      241 cacatcggcc ccagggctgt caccccctgt atcagccact gcaccgcttc aaaatgggca
      301 gccttgtccg cgggcaacag cttgcccgtc ttgtccgtga ggtagagcag aatggccgcc
      361 gattcgaata cagtgtatgg tttgtcgccc gggccatcgt ggtcaacaat caccggcacc
      421 tttgcgatcg ggttcagctt gcggaacgcc ggatcgaatt gctgaccgct gaatacgtca
      481 accggcctca cctgatacgg caacccgaat tcctcaagtg ccataaagat gcgtacagcg
      541 ttcgggctgt acatggcata cagatcgatc atccgtttcc cccttcttta tccgccgacg
      601 ctgagccggt cgtgtactct accacacacg acgccgcagg ggcagtgcag cgagcgtatc
      661 ggtcagcagc gggcaaggcg tgaggcgctg gtcgcctgat ctgacagagc ctgccggatg
      721 cgaccggaac cgacggccgc tatgccgcct ccggggagga tcgcggccgt ttcacgatga
      781 ggtctgtcag gcacgccagt ccagcctggt aggcggcttc catgctgcgg aaccgctcgg
      841 ccgagacctg caccggtctc gacgcaccgg tgcagtgcac ttcccaaccg aacggggtgg
      901 cgccgatgtg aatgcggcgc acgacgacgc tgagggccag ggcttctttg ctgatacgca
      961 tgggatctgt cctcctttcg gccagtttgt gatcccgaga ccgtccggaa tgcgggggaa
     1021 tacccagccg gtccgggggc tcgaggccgt tgattgtgat gctcaaggtc ccgcaccttg
     1081 gtcatcaaca gtgcttccaa tggcgatcat gccgctatcg agcgttgtct caccacggct
     1141 cataccgtga gcggcaacag cgcgagatag gtgcccaaca ggctgacgat gatcgcggcc
     1201 gctttgagat aggcgcccat ggcacctctc catttgacgt gatgtcgacc aggccgggac
     1261 agggttgcgg g
//
LOCUS       DASRPQ010001073         4667 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4528200, whole genome shotgun sequence.
ACCESSION   DASRPQ010001073 DASRPQ010000000
VERSION     DASRPQ010001073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4667
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4528200"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..511)
                     /locus_tag="VFD73_12165"
     CDS             complement(<1..511)
                     /locus_tag="VFD73_12165"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI74749.1"
                     /translation="MDTGDYVSVGSYPFQLRLATSGDLNGIFRLLDGAAAWLRTTKDT
                     DQWERPWPTREARDARVRVGVENGETWIVLDGYVPTGTITIARKPNIDVWSDLDPGCR
                     LSDRSVYVHRLITARNYAGLAGLGSELLNWAGRKGQRLYGAQWIRIDVWASNLALHNY
                     YMKRGFRSCG"
     gene            complement(1291..2088)
                     /locus_tag="VFD73_12170"
     CDS             complement(1291..2088)
                     /locus_tag="VFD73_12170"
                     /inference="COORDINATES: protein motif:HMM:NF019322.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HZI74750.1"
                     /translation="MAAPMYRVIAEQLRQQIEDREFEAGKQLPTEQELQERYSASRNT
                     IRDAIKQLITLGLVETRPGQGTFVVPPIDPFVTTLTGDPTEGGGGGEGTSYASEVEKA
                     DRKPSVSRIKVEIQAASDEVAAGLWIPVGTEVISRHRERYIDGKAWSLETSFYPGEFA
                     DRGAEKLRKAGDIDEGTVRYLQDTIGIRQVGYRDWISVRPPNAGEMDFFSLPPDGRVA
                     VVENSRTAFDGNERPMRLTVTVFRADRNQLIVEVGPVPRPKASTAHD"
     gene            2974..3213
                     /locus_tag="VFD73_12175"
     CDS             2974..3213
                     /locus_tag="VFD73_12175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74751.1"
                     /translation="MSGSAAFEAYGILAGFGMGIVIGVIAMVAVAIRREEKRWSLSGA
                     APGPVAGGVRWLTGFGSAGTHHRPRSHYHHRSRVR"
     gene            3216..3461
                     /locus_tag="VFD73_12180"
     CDS             3216..3461
                     /locus_tag="VFD73_12180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74752.1"
                     /translation="MDGVLAFIALFFVIGIIFGAVIVVAVSILRRDVSLADDPDDPPG
                     YGSLTPDGPSPDLGWEGARDEEPGGDEENPRWQSYGR"
     gene            3546..4649
                     /locus_tag="VFD73_12185"
     CDS             3546..4649
                     /locus_tag="VFD73_12185"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74753.1"
                     /translation="MSEDQNQQRFPWEPGTATGIGSMPGTDPAEAMRIVAGELPDFPH
                     LPELPDRGPGADLTGRTAALLVEIPVEVTPRGWRLAERPGRDLARARTMLSSDLDVLE
                     EVLDDFRGPLKIQLCGPWTLAATLELPRTLNVAIADPGAVADLTASLAEGAAAHVAEV
                     AKRVPGARLVVQLDEPALSAVAGGEVPTASGLSRIAPVEADVLRERLAQVIASTGKYT
                     VVHSCSTAVPFGIIRAAGAGALSFDLSQLRRGEENAVAEAAEAGLGLLTGVVPAVPEP
                     TIPGPAGATVPTGTVAPGDGSAEARQAAERVINLWRRLGLPLDTCAEQAVITPACGLA
                     GASPDQARAALTRCREAGSMLAELIEETGEEPR"
BASE COUNT          791 a         1517 c         1505 g          854 t
ORIGIN      
        1 tcccgcagga ccggaacccg cgcttcatgt agtagttgtg cagcgccagg ttggacgccc
       61 acacatcgat cctgatccac tgggcgccgt atagccgctg acctttgcgg ccggcccagt
      121 tgagcagttc cgatccgaga cccgctagcc cagcgtagtt gcgtgctgtt atcaggcggt
      181 gcacgtagac ggaccggtca gacaacctgc atccagggtc gaggtccgac cagacgtcga
      241 tattgggctt gcgcgcaatt gtgatcgttc ccgtcgggac gtacccgtcc aggacgatcc
      301 aggtttcgcc attctccacg ccgacccgga cccgcgcatc gcgtgcctca cgcgtcggcc
      361 agggcctttc ccactggtcc gtgtccttcg tggtccgcag ccaggccgca gccccgtcaa
      421 gcagccggaa gatcccgttc agatcccccg atgtagcaag acgtagttga aacggatagc
      481 ttcccaccga tacatagtca cccgtatcca cagtgggtga tactacttaa acagcacgaa
      541 acgctaaccc cgggttcgat tgtgcttcga gcaccggctg aaatccccgg tgacctgggg
      601 atacgccaag ctgatcagga aattccggtt acccggcttt aagcttcact gaccttcctg
      661 gtcaaacttt taccgaaact agaagtttcc tcgcgaatcg ctggcctccc gagtgttctc
      721 tgaactgacc ctgaaacttg cggccgcctg gccccgccgc catctgtggc gaggatgtgt
      781 ccaaccagca tcagttggcg ccgacatggt cgtgcccggg ctagggtccg gtaacacttg
      841 ccgtcaagca gggagtgccg gcgctgcgtg tactagccag cgccgacggc ccgtcgagca
      901 gtccggtcca gccgaataac tgacaactgg tccggcagta ccgataactc aagagaaagc
      961 caagtcttag cggcccatgt tccaggggtc gtagtgctca tagcggtact gattcgacgg
     1021 acgcgcgtga agctttgcca tgactaattc tcctttcctt aaatttttat agcaacagaa
     1081 aggcccggac agatttcgcc caaagcctcg ccgaccgcca ctaacgtcac caagctgctg
     1141 gcggcggact tttgtgagat ggccagggat tgaaccttcc caattcaggt ggttgctagc
     1201 tagctgcctt ccccgaccac caaaatatta ccaaggctgg tgccgtgctg gagtctctaa
     1261 ttacaaatcg ttactgtcgt cggccctttt ttagtcgtgt gctgtgctgg ccttgggccg
     1321 tggcacaggt ccgacttcga cgataagttg gtttcggtca gcacgaaaca cggtcaccgt
     1381 caggcgcatg ggtcgctcgt tgccatcaaa tgcggtacgc gaattttcca ccacggccac
     1441 ccggccatct ggcggcagcg agaagaagtc catttcgccc gcattcggcg ggcgcacgga
     1501 aatccagtcc cggtagccaa cctggcggat gccgatcgta tcctgcaggt accggaccgt
     1561 tccttcgtcg atgtcgccag ccttgcggag cttctcggcg ccgcggtccg cgaactcgcc
     1621 cgggtagaac gacgtctcca gagaccaggc cttcccgtcg atgtatcgtt cgcggtgccg
     1681 gctgatgacc tcggtgccaa ccggtatcca caggccggcg gcgacttcgt ccgaggctgc
     1741 ctggatctcg accttgatcc tgctgacgga aggcttccgg tcggccttct ctacttctga
     1801 cgcgtagcta gtgccttcgc cgcccccgcc gccttcggtc ggatcaccgg tcagggtggt
     1861 gacaaaggga tcgatcggcg ggacgacgaa cgtgccctgg ccgggtcggg tttcgaccag
     1921 tcccagggtg atgagctgct tgatggcgtc tcggatcgtg ttccgggagg cgctatagcg
     1981 ctcctgcagt tcctgctcgg tcggcagctg tttgcccgcc tcgaactcgc gatcctcgat
     2041 ctgctggcgc agttgctcgg cgatcacgcg gtacatcggg gctgccatcg aacctccctt
     2101 tggatctgtc tcggtcccta tgactggctc gtaccactca tggggacgat ccatgccgta
     2161 ccactcaaaa gaatctgctc gatcaggttc gacctagact atgtcaggat actaccaact
     2221 ggtaccaaac gttggtatca cttggatggc aggttgggtt ggtcctatcc tagtagtcca
     2281 actgcttggt cgcgcaagta tctacctgat ggctccagta agtcaagcat ttcagctggc
     2341 ttggacaaac cggacgatga gcctggcaca cggacagatg ggcagcctct gcgtggcccg
     2401 catccgcaca gccgagtgtc tggcgaggcc cgccggtgcc aaagtgtggc cccgcgggac
     2461 gattcccgcg ggcggaagct ggaggccgtc gtggcccggc tgaggtcccc gcaagctcgg
     2521 tagcgagcac accgtcaatc acctcgctct cccggtccgc accgcccggg ggagcgagag
     2581 cttgtcgcgt gcggcatcct caaaatatcc cagccatccc aactgctggt acagcccggt
     2641 tggcaggttt tattcccctc attcgaatgt aatctgactg attcggtttc gtgtccaaaa
     2701 ccgacgggta tcccctccgc atgtcccaat ggtcggtacc aggtgaactg tccgaaacag
     2761 gcaggtcatg cgtctccttg ggcacgaacg aacatgtcgt accgcccgta ctggaccgat
     2821 gggtcacctc agtccctaag gccggatggt atgaccagcc tgccgggtcc accctcggga
     2881 gacccgcgag catctggccc tcagagtcga gggccaccca cagcagggcc tgacggtccc
     2941 ggaccgtcag cagggtcgca tggggaggct gtcatgagtg gcagcgcagc attcgaagcg
     3001 tacggaatcc tggctggctt tgggatggga atcgtgatcg gggtgatcgc gatggtggcg
     3061 gtggcgatcc ggagggagga aaagcgatgg tcgctctctg gcgcggcgcc cggcccggtg
     3121 gccggcggcg tccggtggct gaccggcttc ggcagcgccg gcacccatca ccgcccccgc
     3181 agccattacc atcaccgcag ccgtgtccgg taatcatgga cggagtcctg gccttcatcg
     3241 ctctgttctt cgtgatcggg atcatcttcg gcgccgtcat cgtggtcgcg gtctcaatcc
     3301 tccgccggga tgtcagcctt gcggatgacc cggacgaccc gccaggttac gggtcactca
     3361 ctccggacgg gccgtctccg gacctcgggt gggaaggtgc gcgggacgag gagcccggag
     3421 gagacgaaga gaatccccgc tggcagtcct acgggcggta atagcggccg ccgggccggg
     3481 gcgtgagtag tccccggccc ggcgcacggg tcggtttgcc gccgggcggt tctaagctca
     3541 gatgcgtgag cgaggaccag aaccagcagc gttttccctg ggagcccggc accgcgaccg
     3601 ggatcggctc gatgccaggg accgatccgg ccgaggcgat gcgcatcgtc gccggtgagc
     3661 tccccgactt cccccacctg cccgagctgc cggaccgcgg gcccggtgcc gacctcaccg
     3721 gccgcaccgc cgcgctgctg gtcgagatcc cggtcgaggt cacgccgcgc ggctggcggc
     3781 tggccgagcg gcccggccgt gacctggccc gggccaggac catgctctcc tccgacctgg
     3841 acgtcctaga ggaggttctc gacgacttcc gcgggccgct caagatccag ctatgcgggc
     3901 cgtggacgct agccgccaca ttggagctgc cgcgcacgct caacgtggcc atcgccgatc
     3961 ccggcgccgt ggccgacctg accgcctcgc tggccgaggg ggccgccgcc catgtggccg
     4021 aggtggccaa gcgcgtgccc ggcgcccggc tcgtcgtgca gctcgacgag ccggccctgt
     4081 ccgcggtggc cggaggcgag gtgccgacgg cgagcgggct gtcgcggatc gccccggtcg
     4141 aggccgacgt gctgcgggag cggctggccc aggtgatcgc cagcaccggg aagtacacgg
     4201 tggtacacag ctgctcgacg gccgtgccgt tcgggatcat cagggcggcg ggggccggtg
     4261 ccctgtcctt cgacctcagc cagctacggc ggggggaaga gaacgcggtg gccgaggccg
     4321 cggaggcggg cctagggctg ctcacggggg tcgtgccggc tgtgcccgag ccgaccatcc
     4381 ccggaccggc cggggctacg gttccgaccg gaaccgtagc cccgggtgac ggaagcgccg
     4441 aggccaggca ggcggccgaa cgggtcatca acctgtggcg gcggctgggt ctgccgctgg
     4501 acacgtgcgc agagcaggcc gtgatcacgc ccgcctgcgg gctggccggc gcttctcccg
     4561 atcaggcgcg cgccgcgttg acgcgctgcc gcgaggcggg gagcatgctg gctgagctga
     4621 tcgaggagac gggggaagag cccagatgag cgagaacgag acgagcg
//
LOCUS       DASRPQ010001074         2103 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_129218, whole genome shotgun sequence.
ACCESSION   DASRPQ010001074 DASRPQ010000000
VERSION     DASRPQ010001074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2103
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129218"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(171..416)
                     /locus_tag="VFD73_12190"
     CDS             complement(171..416)
                     /locus_tag="VFD73_12190"
                     /inference="COORDINATES: protein motif:HMM:NF025614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPXCG motif-containing cysteine-rich protein"
                     /protein_id="HZI74754.1"
                     /translation="MSYREDDLDEEFPLGDGTADVAAVVCCPYCGESVEIALDPGSGA
                     QQEYTEDCQVCCRPWRVSVGYRPDGSAEVMVDTEDVG"
     gene            415..1677
                     /locus_tag="VFD73_12195"
     CDS             415..1677
                     /locus_tag="VFD73_12195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74755.1"
                     /translation="MVKLLRRWRLGAPLFLIVALIGARLTAVPALSDPVHGAAPASLH
                     LHVPLLYLLLSPAFTLWDGISMLSMSRLRGFLQGLAVLYLLWRLGCVWARIRDQPVNK
                     GRLVQNEVVTLVLTLGGLLLFLATGALWHRPMLSLAGVPSGQSVVDFHSHTNLSHDVK
                     GTLMAGFTAAANQRWHARAGFDAVFLTDHDVVSHESRVASSQSQGAAGVPALCPGIEV
                     SAWRAHIVLLGDTLALDRDGYRRSLDGLLTLLRTSESRYHALTVASLPEYRRNHWGRL
                     DQLITAGLDGFEIVNAAPKANELSRAERDSVIALARTRNRFLVGVSDNHGWGATSMVW
                     NLVPVARQPGALCENVLDRLRSGFQAVQIVERHRLRPDDRWPMLLTPIGVLWEIWRSM
                     GAALTLSWLGWILVWVAWRARRAALAKG"
     gene            1698..>2103
                     /locus_tag="VFD73_12200"
     CDS             1698..>2103
                     /locus_tag="VFD73_12200"
                     /inference="COORDINATES: protein motif:HMM:NF020134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP synthase"
                     /protein_id="HZI74756.1"
                     /translation="MPHSRILGTGFAVPDRVVTNQELSDLMDTTDEWIRTRTGIQERR
                     WVRQGETGVDLGLAATQRALEMADLTPGSLDAIIYATSSPDHFAPGNGVYLQRKLGIT
                     TIPALDIRAQCSGFVYALSVADAWIRTGDYRHI"
BASE COUNT          364 a          672 c          652 g          415 t
ORIGIN      
        1 tacgcctaca atgatcggcc gctgatgatg aatcacgggg cgcccctcag gttgtattcc
       61 ccgatcaagc tcggttataa gctgacgaaa tacctgacca aggtgacgtt tactgcggag
      121 cgaccgggcg gctactggga ggatcagggg tatccctggt tcggcggcct ctagccaacg
      181 tcctcagtat caaccatgac ctcggcgctt ccgtcgggac gatagccgac actaacccgc
      241 cagggccggc agcagacctg acagtcctcg gtatactcct gctgagcgcc gctcccggga
      301 tccaaggcaa tctcgacact ctctccgcag tacgggcagc agaccaccgc cgcgacatcg
      361 gcggttccgt caccgagcgg aaattcttcg tccagatcgt cttctcgata gctcatggtc
      421 aaactcctgc gtcgctggag actgggagct cccctcttcc tgatcgttgc tctgatcggc
      481 gcaaggctta ccgcggtgcc ggcgttgagc gatcccgtcc acggcgccgc acccgcctcg
      541 ctccacctgc atgtccccct tctgtatctc cttttgagcc cggcattcac cctctgggac
      601 ggcatctcga tgttgagcat gagccgtctc agggggtttc tgcaagggct ggcggtgctc
      661 tatctgctgt ggcgactcgg ctgtgtgtgg gcccgaatcc gcgaccagcc tgtcaacaaa
      721 ggaaggctgg tgcaaaacga agtcgttacc ctggtcctga cactcggcgg tttgctgctg
      781 ttcctggcaa caggggcgtt gtggcaccgg ccgatgctgt cactcgcggg ggtaccatcg
      841 ggccagagcg tggtggactt tcacagtcac accaatctct cccatgacgt gaaaggcacc
      901 ttgatggcgg gcttcaccgc cgccgccaac caacgctggc atgccagagc cggttttgat
      961 gccgtgtttc tcaccgatca tgatgtggtg agtcacgagt cgcgagtcgc gagcagtcag
     1021 tcgcagggag cggcaggcgt tcccgcactc tgccccggaa ttgaggtgag tgcctggcgg
     1081 gctcacatcg ttctcctggg agataccctg gcgctcgacc gtgacgggta ccgccgctct
     1141 ctcgatggcc tgctcactct tcttcggacc agcgagtcga gataccatgc gctgaccgta
     1201 gcgtcactac cggagtaccg gcgcaatcac tggggtcggc tcgatcagtt gatcaccgct
     1261 gggctggatg ggttcgagat cgtgaacgcg gcgccgaaag caaacgagct gagtcgggca
     1321 gagcgggatt cggtcatcgc gctggcacga acgcgcaacc gctttctggt tggggtgagc
     1381 gacaatcacg gttggggcgc caccagcatg gtatggaacc tggttccggt tgctcggcag
     1441 ccgggagcac tctgcgagaa cgtcctggac cggctccggt cgggttttca ggccgtgcag
     1501 atcgtcgagc gacaccggct tcggccggac gatcgctggc cgatgttgct cacgccgatc
     1561 ggtgtgctgt gggaaatctg gcgaagcatg ggagcagcgc tgacgctctc gtggctcggc
     1621 tggatcttgg tgtgggtcgc ctggcgggct cgtcgggccg cccttgctaa gggctaatgc
     1681 cccgatcaag atagctcatg ccgcattccc gaatcctcgg aactggtttt gccgtccccg
     1741 atcgcgtggt gaccaatcag gagctctccg acctgatgga caccaccgac gagtggatcc
     1801 gaacccgcac cggaattcag gaacgccgct gggtccgaca gggagagacg ggagtcgacc
     1861 tcggactcgc tgccacccag cgggcgctcg agatggcgga cctgactcca ggctcgctgg
     1921 acgccatcat ctacgccacc tcgagccccg atcattttgc gcccggcaac ggcgtctatc
     1981 tccagcggaa gctcggcatc accaccattc ccgcgctcga catccgggca cagtgcagcg
     2041 gctttgtcta cgcgctctcg gtggccgacg cgtggatccg cacgggagac taccggcaca
     2101 tcc
//
LOCUS       DASRPQ010001075         1188 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1067934, whole genome shotgun sequence.
ACCESSION   DASRPQ010001075 DASRPQ010000000
VERSION     DASRPQ010001075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1067934"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VFD73_12205"
     CDS             complement(<1..317)
                     /locus_tag="VFD73_12205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74757.1"
                     /translation="MKAWQRLNIETWLWLIFAAYWFLGALRTSKTRKRESLLSSLPRN
                     AVLALGAVLLFGKWFSGGFLGRRFVPALPSIWAAGVLLTIAGLALAFWARYHLGRYWS
                     GQIT"
     gene            795..>1188
                     /locus_tag="VFD73_12210"
     CDS             795..>1188
                     /locus_tag="VFD73_12210"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZI74758.1"
                     /translation="MEDAQVVSLLLRRCLAGDAAAWEDIVRRYQRRIYNICYRFAGAA
                     EDADDLTQEVFIKMYKTLDSYDVDRGAFMTWVTTITRNLLVDHFRKGKHDRLTDSLDA
                     TPVQEEEGRTLSEQIEDKGTASPDEQVRS"
BASE COUNT          251 a          392 c          334 g          211 t
ORIGIN      
        1 gtgatctgcc cgctccagta gcggcccagg tggtagcgcg cccagaacgc cagtgctaac
       61 ccggcgatcg taagcaggac cccggcggcc caaatggagg gcagggcggg gacaaagcgc
      121 cggcccagga agcctccgga aaaccatttg ccgaacagga gcacggcccc tagcgccagc
      181 accgcattgc gtggcaggct tgagagcagg ctttcccgct tccgcgtctt gctggttcgg
      241 agcgcaccta gaaaccagta ggcggcaaag atcagccaca gccaggtttc aatgttaagt
      301 ctctgccatg ccttcaagat ccgttccttt cctgcccaaa gaagctaatt tacctcagcg
      361 gctgaagccg gccagattgc tggctggtta ctgcagcgct aaagcgctgc tccacccaaa
      421 agctccatcc aaaagctcca cgccaaaggt tccaccccag agctccaccc aaagctccgc
      481 cccgggagct ccgcccatga gctccaccca aaagctccgc gcatgagctc cgcgcaggag
      541 ctccacccaa gagctccgcc ccggactccg cccaatcgag ccgttcagtt aggtctcacc
      601 cacatcacag ctcgctatgt cggcggggtg tttcgatgct ttccgccgcg ggagtgtaac
      661 tccctttgct agaatcactt cgttccacaa cagagaactt ttgcttccgg ggccgcgtat
      721 cggtaaggtg cagtcgggaa attcccgctt cttggactgt aaattgagcc aggagctttt
      781 ctcgggagtg cgggttggaa gatgcccagg tcgtaagcct actcctccgt cgctgccttg
      841 ccggcgacgc cgccgcctgg gaagatattg tccgccgcta ccagcgacgt atctataaca
      901 tttgctatcg tttcgcggga gcggccgagg atgccgacga cctcacccag gaggtcttca
      961 tcaagatgta taaaaccctg gacagctatg acgtggaccg gggcgcgttc atgacctggg
     1021 taactaccat cacccgcaac ctgctggtgg accacttccg caagggcaaa catgaccgcc
     1081 tgaccgactc tctggacgcc accccggtcc aggaggagga gggccgcacc ctgagcgagc
     1141 agatcgagga caagggtacg gccagcccgg acgagcaggt ccgcagcc
//
LOCUS       DASRPQ010001076         1783 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_443565, whole genome shotgun sequence.
ACCESSION   DASRPQ010001076 DASRPQ010000000
VERSION     DASRPQ010001076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_443565"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..684
                     /locus_tag="VFD73_12215"
     CDS             <1..684
                     /locus_tag="VFD73_12215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74759.1"
                     /translation="HHWELFSRDTTYRIYLAPYVAGTPLTAEAVERTARHVLPVAPTR
                     YEAIPVPLVEGSWLVSVGPWVLRLRLDEASRPPAEPAVPADGKQLTTRAGTIVRRGSE
                     PGEDAVARVRGYFERNVTARLTMAYYYQEFILGLAAPQTVPMITVVIALDLSGEGAVS
                     DYKKLLQGLIWKERGHARDLADFLLANGLLTPTDLDEARRVAAENERTGVCEIARRRL
                     QYRPKGKGA"
     gene            complement(817..1056)
                     /locus_tag="VFD73_12220"
     CDS             complement(817..1056)
                     /locus_tag="VFD73_12220"
                     /inference="COORDINATES: protein motif:HMM:NF016070.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF397 domain-containing protein"
                     /protein_id="HZI74760.1"
                     /translation="MGIPMNGNPSERPNSGLTWIKSSLSFSNGNCVEIASLADGGVGV
                     RNSRHPEGAILAFTPDEWHAFIGGVRNGEFDSFGR"
     gene            complement(1395..>1783)
                     /locus_tag="VFD73_12225"
     CDS             complement(1395..>1783)
                     /locus_tag="VFD73_12225"
                     /inference="COORDINATES: protein motif:HMM:NF040183.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Scr1 family TA system antitoxin-like
                     transcriptional regulator"
                     /protein_id="HZI74761.1"
                     /translation="SVVLDESILKRRIGDDSVMYDQLQRLVKEADRPNLTLQVLPLDA
                     QHSVFGESFVIFSFGQDADAMLQDVVSTEHLRSGFTLEGERDTYLHRIAFQMLSEASL
                     DPAASRALILKTAESYWSGAQRHARA"
BASE COUNT          332 a          567 c          573 g          311 t
ORIGIN      
        1 caccactggg aactgttcag ccgcgacacg acctaccgga tctacctggc cccgtatgtg
       61 gccgggacac cgctgaccgc ggaggccgtg gagcggacgg cgcggcatgt cctgccggtc
      121 gcgccgaccc gctacgaggc gataccggtc ccgctcgtgg agggctcgtg gctggtcagc
      181 gtgggtccgt gggtgctgcg gctgcggctc gatgaggcca gccggccgcc cgccgagccg
      241 gcggtcccgg ccgacggcaa gcaactgacc acccgggccg ggaccatcgt gcggcggggc
      301 agcgagcccg gcgaagacgc ggtggcccgg gtgcgcggtt acttcgagcg gaacgtgacc
      361 gcgcggctca cgatggccta ttactaccag gagttcatcc tcggcctggc cgccccgcag
      421 acggtgccga tgatcacggt ggtgatcgcc ctggacctga gcggagaggg tgcggtgtcc
      481 gactacaaga agctgctgca gggcctgatc tggaaggagc gcggtcatgc tcgcgatctc
      541 gccgacttcc tgctcgccaa tggcctgctg acgccgactg atctggacga ggcgcgccgg
      601 gtggcggcgg agaacgagcg cacgggcgtc tgcgagatag cgcggcggag gctccagtac
      661 cgtccgaagg gcaagggagc gtaacgcgcc cgtgccgacg gcaccggggc ggcagcatga
      721 agcggagggc ccatgcggat tcaggctgaa ccctccgctt ctgccctgat cggcagttgt
      781 acgggcggtc gctacggcaa tatgccgtcg cgtccgctac cgaccgaaac tgtcgaattc
      841 tccgtttcgt acgccgccga taaatgcgtg ccattcgtcc ggggtaaatg ccagaatcgc
      901 cccttcaggg tgtctgctgt tgcggacacc gacgccgcca tcggctaggc tcgctatctc
      961 gacacagttg ccgttggaga aactcagcga gctcttgatc caggtaagac ccgaattcgg
     1021 tctttcggag gggtttccgt tcataggtat acccatgtca tttacctcac tgattgttgt
     1081 gaataacccc gacgcgcgac tacgaaatgt ggtgttatca tcaccagtcg cagtcgccac
     1141 tctaaggcta acagacacca ctagcatcta gggtcccact tgcctcaatt tagcactgag
     1201 gtccggcgaa tgtcacttgt accgccgacg taccgctgct gtcaacccca caccgaccag
     1261 gcagtatctg gcaaagcggc gtcaccgcga ccgggcccgc acaaggagcc ggcgtcccgg
     1321 ccgccagaca gcccgggagt catcacgaaa tatggctttt gccgcagcaa aagggaatta
     1381 ccggccatca ctattcaggc gcgagcgtgc cgctgggcac cggaccaata cgattccgca
     1441 gtcttgagaa taagcgcccg ggatgccgcc gggtcgagcg acgcttcgga aagcatctga
     1501 aatgcgatcc ggtgcaggta tgtatcgcgc tcgccttcca gggtgaagcc gctccgcagg
     1561 tgctcggtgc tcaccacgtc ttgcagcatc gcatcagcgt cttggccgaa gctgaagatg
     1621 acaaaggatt ccccgaatac cgagtgctgt gcgtcaaggg ggagaacctg caacgtcagg
     1681 ttcggccggt cggcctcttt gacaagccgc tggagctggt cgtacatcac cgaatcgtcg
     1741 ccgatccggc gcttcaggat cgattcgtcc agcacgaccg aca
//
LOCUS       DASRPQ010001077         4241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4201640, whole genome shotgun sequence.
ACCESSION   DASRPQ010001077 DASRPQ010000000
VERSION     DASRPQ010001077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4241
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4201640"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1638)
                     /gene="ctaD"
                     /locus_tag="VFD73_12230"
     CDS             complement(<1..1638)
                     /gene="ctaD"
                     /locus_tag="VFD73_12230"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HZI74762.1"
                     /translation="MATRVLDQHQARAAARHGEKTGLWSWLTTVDHKRIGILYGTTAF
                     VFFLMGGIEALLIRIQLARPDNTFVSPERYNELFTMHGTTMIFLAIMPISAMFFNYMI
                     PLQIGARDVAFPRLNAFSYWVFLLGGLFLNISWLFNAAPDQGWFGYANLTSRQYSPGM
                     NVDFWMLGLQILGIASLAAAVNFFVTIINLRAPGMKLMRMPIFTWMSFITQVLLLLAF
                     PVITVALILLMFDRFFGTHFFVPSGGGDPLLWQHLFWIFGHPEVYILILPAFGIISEV
                     LPVFSRKPLFGYAAMVFSGVFIAFLGFGVWSHHMFAVGMGPIADTFFALTTMLIAIPT
                     GVKIFNWIGTMWGGSLQFRTPMLFAIGFIAMFIIGGLSGVMHSEPPADLQQTDTYFIV
                     AHFHYVMFGGSIFGLTAGAYYWWPKMFGRMLDERLGKVHFWLMLIGFNVTFFPMHFLG
                     LNGMPRRTYTYPAGLGFETLNQLETVGAFILGFSFVVFLVNVIQTWRKPRNAPADPWN
                     GATLEWSIPSPPQEWNFAEIPVVHGRDALWELKREQGR"
     gene            complement(1668..2816)
                     /gene="coxB"
                     /locus_tag="VFD73_12235"
     CDS             complement(1668..2816)
                     /gene="coxB"
                     /locus_tag="VFD73_12235"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR02866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HZI74763.1"
                     /translation="MLIRTAARRSSRLVPALCLLALTLVGCSPEHFPQTTLLPRGDFA
                     RIADDLLDTTVKWALLVFVLVEGVLIYAIFRFRGKPDDPEPHQTHGNTTVEIIWTVIP
                     ALILAAIAVPTVKAIFQTNAIPGKDALTIEVVGHQWWWEFRYPEYNLTTANELHVPVG
                     RTVSLRMGSADVIHSFWVPQFAGKRDVFGNRETRLWFKAEVGGEYPAQCGEFCGIQHA
                     RMGYRIKAQSPEEFQGWVAHMQTLGPPPPPGSAPAAPSGTKPGARTTAAGTSSGVRTA
                     SEGASVQQAAAQSPRYADGEKLFMSKGCVGCHSLQAVNAPKGMIGPNLANVGARSYIA
                     AGTLKNTDENLARWIRNPQEIKKGVLMPNLGVSETEAQALVAFLRAHQ"
     gene            3046..3567
                     /locus_tag="VFD73_12240"
     CDS             3046..3567
                     /locus_tag="VFD73_12240"
                     /inference="COORDINATES: protein motif:HMM:NF013440.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GreA/GreB family elongation factor"
                     /protein_id="HZI74764.1"
                     /translation="MIREMREKLGREIDQLSHELNILLPQAIAQAVELGDLRENSEYK
                     AALERQQFVQARLGQLHQRLNQLGQLANTEAPTDRVGLGSRVTVLDLDSQETDTYVVV
                     LAEMMDIDAGHISLASPLGRALSNCQVGDEVNLRLPAATRRLRITGLVTVHQADQAED
                     ESARGTADPNGKR"
     gene            3567..3935
                     /locus_tag="VFD73_12245"
     CDS             3567..3935
                     /locus_tag="VFD73_12245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES family protein"
                     /protein_id="HZI74765.1"
                     /translation="MEFPKKQLLVVGDRVLITPEDGDERTRVGLYLPATAIDSQQVQT
                     GLIVATGPGTPVADLSTLDEEPWKIDSRETRGRGMQARVGDHAIFFRKAAVEITFEEK
                     KYLVVPQAAILVLVRDDLPI"
     gene            3965..>4241
                     /locus_tag="VFD73_12250"
     CDS             3965..>4241
                     /locus_tag="VFD73_12250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74766.1"
                     /translation="MCYFLYIASPLTLSEVRSMVPEGITVDLADPAEQGALKALHRGI
                     QTVAKLLIGRCSCDFVRQRSSTRQEDERHLRERYRRAGVSRAEVIAGL"
BASE COUNT          898 a         1273 c         1316 g          754 t
ORIGIN      
        1 tcttccctgt tctcgcttca gctcccacag cgcatcgcgt ccgtggacca ccggtatctc
       61 cgcaaagttc cattcctgcg ggggtgacgg gatggaccac tccagcgtgg cgccgttcca
      121 gggatcggcc ggagcgttcc gtggcttgcg ccaggtctgg atgacgttga ccaggaacac
      181 gacgaacgag aaaccaagga tgaaggctcc taccgtctcg agctggttca gcgtctcgaa
      241 ccccaatccg gcgggatagg tgtaggtccg gcgcggcatg ccgttcaacc ccaggaaatg
      301 catggggaag aacgtcacat tgaatccaat cagcatgagc cagaagtgga ccttgcccaa
      361 ccgctcgtcg agcatgcggc cgaacatctt gggccaccaa tagtaggcgc cggcagtgag
      421 gccgaaaatg ctgccgccga acatcacgta atggaagtgg gcgacgatga agtaggtatc
      481 cgtctgttgc aggtcggcag gaggctccga gtgcatgacc ccggacaggc cgccaatgat
      541 gaacatggcg atgaaaccga tggcaaacag catcggggtc cggaactgaa gggagccgcc
      601 ccacatcgtc ccgatccagt tgaagatctt tacccccgta ggaatggcga tcagcatcgt
      661 cgtcagggca aagaaggtgt cggcaatggg ccccatccct acggcgaaca tgtgatggct
      721 ccacaccccg aacccaagaa acgcgatgaa cacgccggag aagaccatcg ccgcatatcc
      781 gaacagcggc ttccgggaga agaccggcag cacctcggag atgatcccga acgccggcag
      841 gatcaggatg tagacctcgg gatgaccgaa gatccagaac aggtgctgcc agaggagcgg
      901 atcgcccccg ccggagggaa cgaagaagtg cgtgccgaag aagcggtcga acatgagcag
      961 gatcagcgcc accgtgatga ccgggaaggc cagcagcagc aagacctggg tgatgaagct
     1021 catccacgtg aagatcggca tgcgcatcag cttcatgccg ggcgcccgca aattgatgat
     1081 ggtaacgaaa aagttcaccg cggctgccag cgaggcgatg cccaggatct ggaggccaag
     1141 catccagaag tccacgttca tccccggcga atactggcgc gaagtgagat tggcgtagcc
     1201 aaaccagccc tgatccggcg ccgcattgaa caaccagctg atgttgagga agagcccgcc
     1261 cagcaggaac acccaatagc tgaacgcatt gagcctggga aacgccacgt cccgagcccc
     1321 gatctgcagc gggatcatgt agttgaagaa catggccgat atgggcatga tcgcgaggaa
     1381 gatcatggtc gtgccatgca tggtgaacag ctcgttgtat ctctcgggcg agacgaaggt
     1441 gttatcgggc ctggccagct ggattcggat cagcagcgcc tcgattccgc ccatcaagaa
     1501 gaacacgaat gccgtggtgc cgtacaggat accgatacgc ttatggtcga ccgtggtgag
     1561 ccagctccag agtcccgtct tctctccgtg acgagcagct gcacgcgcct gatgctgatc
     1621 tagaaccctg gttgccatac gaaccttgtc atggtagtca gataggtcta ttgatgagcc
     1681 cgaagaaagg cgaccagcgc ctgcgcctcg gtctcgctga cgccaaggtt gggcatcagc
     1741 acgcccttct tgatttcctg cggatttcga atccagcgag ccagattctc atcggtgttc
     1801 ttgagcgtcc ccgcggcgat gtaggaacgc gcgcccacat tggcgaggtt cgggccgatc
     1861 atccccttcg gggcattgac tgcctggagc gaatgacagc ccacgcagcc tttgctcata
     1921 aacagcttct cgccatcggc gtaccggggc gactgagcgg ccgcttgctg cacgctggct
     1981 ccctcgcttg cggtccgcac tccgctgctg gtacccgccg ctgtcgttcg cgctccgggc
     2041 ttggtgcctg atggcgctgc gggggccgag cccggcggtg gcggcggacc cagggtctgc
     2101 atgtgggcca cccagccctg gaactcctcg ggtgattgag ccttgatccg gtatcccatg
     2161 cgggcgtgtt ggatcccgca gaattcacca cactgcgccg ggtactcccc tccaacctcg
     2221 gccttgaacc agagccgggt ttcccgattg ccaaagacgt cgcgtttgcc cgcgaactga
     2281 ggtacccaga agctgtgaat gacgtccgcg ctccccatcc gaagcgaaac cgtccggccc
     2341 accggaacgt gtagctcgtt ggccgtcgtc agattgtatt ccgggtagcg gaactcccac
     2401 caccactggt gcccaaccac ctcgatggtc agcgcatcct taccgggtat cgcgttggtc
     2461 tggaagatgg ctttaacggt aggaacggcg atggcggcca ggatcaaagc gggaatgacg
     2521 gtccagatga tctccacggt agtgttgccg tgggtctgat ggggctcagg gtcgtccggt
     2581 ttgccccgaa agcggaagat ggcgtagatc aaaactcctt ccaccaagac aaacacgagc
     2641 agcgcccact tgactgtggt gtcgagcagg tcgtctgcga tccgtgcgaa atcgccgcga
     2701 gggaggagcg tggtctgagg gaagtgttcc gggctgcaac cgaccagcgt caacgcgagc
     2761 aggcagagcg cgggaaccaa ccgggacgag cgcctggcag cggtcctgat gagcattacg
     2821 cgttcatcct gttcgtaaac accacaaaaa ctcgagggta aacgtaggcc agcagcactt
     2881 tacccttggc ccccgaaggt gtcaaggaac tccttgcgaa ttcatgacct gacagccgct
     2941 aaaggattcc accggactcg atcttggagt atctttcatg ctagacttcc cgacagcctg
     3001 gagcgttccc tccgggccat tcctttttta cgcctggtag ggccaatgat tcgtgaaatg
     3061 cgcgagaagc tgggccgcga aatcgatcag ctcagccatg agttaaatat tctgctgccg
     3121 caggcgatcg ctcaggccgt tgaactcgga gaccttcggg agaactcgga gtacaaggct
     3181 gccctcgagc gccagcaatt cgtccaggcc cggctcggcc aactccacca gcgcctcaac
     3241 caactcggcc agctcgccaa caccgaggct cccactgacc gtgtgggcct gggatcgcgg
     3301 gtgactgtgc tcgatctcga ttcccaggag accgacactt acgttgtcgt gctggcagag
     3361 atgatggata tcgacgccgg ccatatctcc ctggcgtcac ccctggggcg cgcgctctcc
     3421 aactgccagg tgggagacga ggtgaatctc cggcttcctg ccgccacccg gaggttacgg
     3481 attaccgggt tggtgactgt gcaccaagcc gatcaggcgg aggacgagag cgcccggggc
     3541 accgccgacc ccaacggaaa acgctgatgg agttccccaa gaagcagctt cttgtcgtcg
     3601 gcgaccgggt gctgattacc ccggaggacg gcgacgagcg gacccgggtg gggctctacc
     3661 tgccggccac ggccatcgat tcccagcaag tgcagaccgg actcatcgtt gccaccggtc
     3721 cgggaactcc ggtggcagac ttgagcacgc tggacgagga gccctggaag atcgatagcc
     3781 gagaaacccg cggacggggc atgcaggcca gggtgggaga ccacgcaatt ttctttcgca
     3841 aggccgcggt cgagatcacg ttcgaggaga agaaatattt ggtcgttccc caggccgcca
     3901 ttctggtgct ggtgagggat gacctgccga tctgaaaggc ggtgagcggt aaaggtaaga
     3961 aagagtgtgc tacttcctct acatcgcgag tcccctgaca ttgagcgaag tgcgttcgat
     4021 ggtgcccgag ggcatcaccg ttgacctggc cgatccggcc gagcaggggg cactgaaagc
     4081 gctgcaccgc gggatccaga cagtcgcgaa gttgctcatt ggccgatgct cctgcgattt
     4141 cgtgcgtcag cgcagctcca ccaggcagga agatgagcgc cacctccggg agcgatatcg
     4201 ccgggcaggc gtctcacggg ctgaggtcat tgccgggctg g
//
LOCUS       DASRPQ010001078         1960 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3582698, whole genome shotgun sequence.
ACCESSION   DASRPQ010001078 DASRPQ010000000
VERSION     DASRPQ010001078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3582698"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1088
                     /locus_tag="VFD73_12255"
     CDS             <1..1088
                     /locus_tag="VFD73_12255"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZI74767.1"
                     /translation="RQVPGRKTDVKDCQWLQELHTYGLLRGAFRPEDQICVLRSYLRQ
                     RGMLVAMASRAVQHMQKALEQMNLKLTEVVSDINGKTGMEIIHAILAGERDPQRLASH
                     RDRRCKHDQATIAKALEGHWRAEHLFALQQALEQYEFLQQQLQACAQQIEACLQTFVT
                     HVEVEPPQPTPARKRRARQRQAPSFDVPKYLDAMTGVDLTQIDGIDALTALKVISEIG
                     LDMTRWPTGKHFASWLGLCPGNKVSGGKRSRMRSKPTANRAASALRLAAQGLVNSHSA
                     LGVYYRRMRARLGAPKAMTATAHKLARLVYSMLRNGTAYVDAGQQAYEQKYRDRVLTN
                     LQRKARVFGYQLVHVADPGSAQAAATL"
     gene            1460..>1960
                     /locus_tag="VFD73_12260"
     CDS             1460..>1960
                     /locus_tag="VFD73_12260"
                     /inference="COORDINATES: protein motif:HMM:NF013698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI74768.1"
                     /translation="MPRRKSPSLPPDPATAALLQTLNPHAAGIDVGATELWVCVPPSA
                     VAAPAASSGLAVLPPYVRRFGAFTADLHAIAAWLRQCQVTTVAMESTGVYWIPLYDLL
                     ESVGFQVLLVDPRQAQRAPNRPKTDVHDCQWIQRLHSLGLLTAAFRPEEPIRVWRAYQ
                     RHRATLI"
BASE COUNT          343 a          619 c          642 g          356 t
ORIGIN      
        1 cgcgccaagt gcccgggcgc aagacggacg tgaaggactg tcaatggctg caagagctcc
       61 acacctatgg cttactgcgt ggcgcctttc gtcccgagga ccagatctgt gtgctgcgga
      121 gctacctgcg gcaacggggt atgctcgtgg ccatggcctc gcgcgcggtc cagcatatgc
      181 agaaagccct ggagcagatg aacctcaaat tgaccgaggt cgtcagcgat attaacggga
      241 agacagggat ggagattatc cacgctattc tcgcaggcga gcgcgatccc cagcgtctgg
      301 ccagccaccg cgatcggcgg tgcaaacacg atcaggcgac gatcgccaag gccttggaag
      361 ggcactggcg ggctgagcat ctctttgcgt tgcagcaggc cctggagcag tatgagtttc
      421 tgcagcagca gttgcaggcg tgtgcgcagc agattgaggc atgtctccag acgtttgtga
      481 cacacgtgga agtcgaaccg cctcagccga cgcctgcccg caaacggcgc gcgcgccagc
      541 ggcaggcgcc aagctttgac gtccccaagt atctcgacgc gatgacgggg gtcgacctga
      601 cgcagattga tgggattgat gcgttaaccg ccctgaaggt gatcagtgag atcgggctcg
      661 acatgacgcg ctggccgacg ggcaaacatt ttgcgtcctg gttggggttg tgtccgggca
      721 acaaggtgtc gggggggaaa cggtctcgca tgcggagcaa gccaacggcc aatcgggcgg
      781 ccagcgcctt acggctagcg gctcagggct tagtcaatag tcatagcgcc ctgggggtct
      841 attatcgtcg gatgcgagca cggctgggcg cacctaaggc gatgacggcg acggcgcata
      901 agctggctcg gctggtctac agcatgctgc ggaatggcac cgcctatgtt gacgcgggac
      961 agcaggcgta cgaacaaaag tatcgcgatc gggtgctgac gaatctgcaa cggaaagcgc
     1021 gggtatttgg ttaccagctc gtgcacgtcg cagacccggg cagtgctcaa gccgccgcaa
     1081 cgctctaacc tggggaagtt acttggaaat cttgtaagcc cctgacgggg cgcgccgacg
     1141 gcggggaaca ggagcgccac tgtgctatcc tccttgctgg tagtgggtcg cggtatccgt
     1201 acaaactgtg gtgcctcgtg cccgtttgga agtctggatt ggggaggctg cggcctcgtc
     1261 gttggtgacg gcgcggcctg tggccccagg ccggcgtcga tcccggtggg aagactgcct
     1321 ctacccgccc ctcccctacc cgctgccagc gtgtccttgg gcagccgctg cctctccgca
     1381 gccgctgctc ttatctccgg aggccgctgg ggctcttagc ccttaccccc ggtgagtcgg
     1441 tcctctgctg gaggatgcca tgccccgacg caaatccccc tcgttgccac ccgatcccgc
     1501 cacagcagcc ctgctgcaga cgctcaaccc gcacgccgct ggcatcgacg tcggggcgac
     1561 cgagttatgg gtctgtgtcc ctcccagcgc ggtcgcggcc cctgcggcct cgagcgggct
     1621 cgcggtcttg cccccctacg tccgccgttt cggcgccttc acagccgact tgcacgcgat
     1681 cgctgcctgg ttgcggcagt gccaggtgac gacagtggcc atggaatcga cgggcgtgta
     1741 ctggatcccg ctctacgacc tactggaaag cgttgggttc caggtgctgt tggtcgatcc
     1801 ccgccaggcc cagcgtgccc cgaaccggcc caagacggac gtccacgact gccaatggat
     1861 ccagcgactg cacagcctcg gactgctgac cgcggccttc cggccggagg agcccatccg
     1921 cgtgtggcgg gcctatcagc ggcatcgcgc taccttgatc
//
LOCUS       DASRPQ010001079         1341 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2654518, whole genome shotgun sequence.
ACCESSION   DASRPQ010001079 DASRPQ010000000
VERSION     DASRPQ010001079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1341
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2654518"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(167..907)
                     /locus_tag="VFD73_12265"
     CDS             complement(167..907)
                     /locus_tag="VFD73_12265"
                     /inference="COORDINATES: protein motif:HMM:NF033558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HZI74769.1"
                     /translation="MVTKFPPCPRCGSRRLIRFGLVAGQQRWRCKRCRYQFTRLDGHG
                     TPEPTKRAAVSLYGYGLSFNAVARLLGTTAQSVLRWVCRYVDRCCTKPPPGEAVVIEL
                     DEMWHFLQRKTNKVWIWKAYDRTTGRLIDWECGGRDERTFRRLFDRLARWKVRLFCSD
                     SYVVYPLVLAVGSHHQGKSETVALERNNARQRHWTAALRRRSIVVSKSLAMIERRVAL
                     FAHLHVNKEAAPEMYRLSIQTGNFPALG"
BASE COUNT          266 a          413 c          412 g          250 t
ORIGIN      
        1 gcccactcca catccgtcag gtcgctcgga taccgccgcc cgtcatcctt gtacttctcg
       61 cgatcttcgg ccgtccacat gctgatctcc cttccaggat caccaacagt cgccgacggg
      121 tttcagtcaa acaggctctg agagtttaac gaactaatgt tgcattttag ccaagtgctg
      181 ggaagtttcc ggtttgaatg gacagcctgt acatctcggg agcggcctcc ttgttgacgt
      241 gcaggtgagc gaacagggcg acccggcgct cgatcatggc gagggacttg gagaccacga
      301 tggaacgccg ccgcagcgct gcggtccagt ggcgctgccg ggcgttgttg cgttccaggg
      361 cgacggtttc actcttgccc tggtgatggc tgccgaccgc cagcaccagc gggtagacga
      421 catagctgtc ggagcagaac agacgtacct tccagcgcgc gaggcggtcg aacagacgcc
      481 ggaaggtccg ttcgtcacgg ccgccgcact cccagtcgat gagccgcccg gtggtgcggt
      541 cgtaagcctt ccagatccag accttgttcg tcttgcgctg caggaagtgc cacatctcgt
      601 cgagttcgat caccaccgct tcgccgggcg gcggcttggt gcagcagcga tcgacatagc
      661 ggcacaccca gcgcagcacc gactgcgccg tcgtgccgag cagccgggcg acggcgttga
      721 aggacagacc gtagccatac aggctgaccg cggcgcgttt ggtcggttcg ggcgtgccgt
      781 gcccgtcgag gcgcgtgaac tggtagcggc accgcttgca gcgccaccgt tgctggccgg
      841 cgacgaggcc gaaccggatg aggcggcgac tgccgcaccg cggacaggga ggaaatttgg
      901 ttaccatcaa gacccgaaac tgtgaactcc tccaggttat ataaaatccg acattagtcc
      961 gttaaaccct ccccgatatt cgggcaagtc ataccaacgg cggctatcac ttctatcatc
     1021 tgtgccgcaa tgcggcggaa tcccagctct gtgttggaac tgatcatccg ccgtccgcat
     1081 caccgctctt ctcgaccgta atcaggtggc gcttgaattg actatgagct ggcgaccata
     1141 atagttgctg gagcaggtta gacagatcgg ggcatcgaac gaaacgggag gcggcgcggg
     1201 cataactcct ccagtcccgg cgcagggaag agcacggccg ggtaggcaga tcaatgggct
     1261 taccaaaaat ccggccgctt cagccggcct tcagcaacgg cggagacgat ggcagcagga
     1321 caacaccgcg gtctgtaatt c
//
LOCUS       DASRPQ010001080         3893 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3278340, whole genome shotgun sequence.
ACCESSION   DASRPQ010001080 DASRPQ010000000
VERSION     DASRPQ010001080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3893
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3278340"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(188..517)
                     /locus_tag="VFD73_12270"
     CDS             complement(188..517)
                     /locus_tag="VFD73_12270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HZI74770.1"
                     /translation="MTKADLVEQVTASIARTAGPMISKKDCARVVDAFLEAVKEALKQ
                     QHNIEVRGFGTFKIRRRKTRMARNPRTGDPVEVAARPVPVFKPSKELRALVADETTSE
                     AEPAQGM"
     gene            complement(597..1709)
                     /gene="carA"
                     /locus_tag="VFD73_12275"
     CDS             complement(597..1709)
                     /gene="carA"
                     /locus_tag="VFD73_12275"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HZI74771.1"
                     /translation="MTDRPAFVLLEDGAWFSGSSARPLPPAFGEVVFTTNLTGYQETF
                     TDPSYLGQIVVMTAPMIGNYGVNEDDMESPFPQVSGVVVRELSRHPSNWRATRSLEDW
                     LSSAGVPVIEGVDTRRLTRHLRERGAMRGVVAEGIAPTPEITARLLASPSMEGLDLAS
                     RATVQARTTEGSGPHVVAYDFGMKRNIVRMLVAAGCRVTVVPATTSAAEVRELKPDGL
                     FLSNGPGDPAAVGYALGTLRELADSGLPTFGICLGHQLIGLAYGGSTAKLPYGHRGGN
                     HPVRDIRTDQVLITTQNHGFAVVGNEVGVPGAPGLEVTHLNLNDRTIEGIRHRELPLF
                     AVQYHPEAAPGPHDALPHFAEFMESLGGTRVKLATP"
     gene            complement(1741..2274)
                     /gene="secG"
                     /locus_tag="VFD73_12280"
     CDS             complement(1741..2274)
                     /gene="secG"
                     /locus_tag="VFD73_12280"
                     /inference="COORDINATES: protein motif:HMM:TIGR00810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HZI74772.1"
                     /translation="MKSKVATRALATTLSTFPPRLTKIPRTMFAFLVTLLILDALLLS
                     VVVLLQAGQGGGLASLGGGGTETVLGGRQAVTILTKLSWWCGGIFLALSLVLSLVPRG
                     GNSSALQEKLRAASPAAPAQAPLPLGQPGQAAPAPSTSKPATGSNAAPSTAPAPLPLG
                     APAKPAPGTSAPQQPKK"
     gene            complement(2271..3155)
                     /locus_tag="VFD73_12285"
     CDS             complement(2271..3155)
                     /locus_tag="VFD73_12285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase family
                     protein"
                     /protein_id="HZI74773.1"
                     /translation="MPELPDITLYLEQLRPRVLAEPLNRLLIRSLFVLRSVDPSPAAV
                     EGKRVVELRRMGKRIVFGLEDDLFIVVHLMIAGRLRWRPAGGSAGGKLTLAVFEFPGG
                     SLHLTEAGSKRRASIHLVTGEAGLSQFARGGLEVLETSLDEFRERLTAENHTLKRALT
                     DPRLFSGIGNAYSDEILHRARLSPLLLTSKLDESQVATLYQATVSTLREWIARLQQAA
                     GDDFPEKVTAFRDGMAVHGRFGQPCPVCGAPVQRIRYADNETNYCARCQTGGRLLADR
                     SLSRLLKQDWPRSIDEVE"
     gene            complement(3164..>3893)
                     /locus_tag="VFD73_12290"
     CDS             complement(3164..>3893)
                     /locus_tag="VFD73_12290"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZI74774.1"
                     /translation="HRLDPQTQSLGIAPHSIRAAGPQEIALLYREAVKRGLPIHMHVE
                     EQRREIEESNAAYGRSPMAVILDATEDGAFTAVHCTHTADADMKRFLAADGIVCLCPL
                     TEGNLGDGIPRLAQAHTAGSRLAIGTDSNNRLAMLEEMRWLEYGQRLQHEMRGALPDT
                     GGAVAPVLLAAATLGGAKALGLASGAITSGCWADLVAVDLNAPALAGVTPEHLLEALV
                     FGAGNEVIAGTYVGGRWRQTGDQS"
BASE COUNT          706 a         1236 c         1271 g          680 t
ORIGIN      
        1 gcgccgagcg cctcggcgta gctggcgaac agctggacgc gaaccgtaat cagcggaagc
       61 gccgtttccg tcttcgtcat gaatgaaagc tatccccctg cgctccggtt cggaaacaga
      121 acgggagcaa acgaaagtcg cccggggaaa ccgggcgact cttgcatcac tcaccgctga
      181 aagtggctta catgccttgc gccggctcgg cctcggaggt cgtttcgtcc gcaaccaggg
      241 cgcgtaactc cttgctaggc ttgaagacgg gtaccggtcg cgcagccacc tccaccggat
      301 cgccggtgcg tggattgcgg gccatcctgg tcttccggcg gcggatcttg aaggtgccga
      361 atccgcggac ctcgatgttg tgctgctgct tgagcgcttc cttgaccgcc tcgaggaagg
      421 cgtccaccac gcgggcgcag tctttcttcg agatcatggg cccagccgtg cgggcaatgg
      481 aggcggtcac ctgttcaacg agatcggcct tggtcatgca tcccccagaa gggttatgaa
      541 ggcggagcgg aggagggcaa cccgatggcc gatactatgg gcttaagcgt tgtctgtcaa
      601 ggggttgcca acttaaccct ggttccgccg agcgactcca tgaattccgc gaaatggggg
      661 agcgcgtcgt gagggccggg agccgcctca ggatgatact gaaccgcgaa cagcggcagc
      721 tctcgatgac gaatcccctc gatagtgcgg tcattcagat tgagatgggt gacctcgaga
      781 ccgggcgcac caggcacgcc aacttcattc cccacaaccg cgaagccatg gttttgcgtg
      841 gtgatgagaa cctgatcggt ccggatgtcg cgcaccggat gattaccgcc gcggtgcccg
      901 taagggagct tggccgtcga ccccccatag gccaagccga tgagctggtg tcccaggcag
      961 ataccgaacg tcggcaggcc gctgtcggcg agttctctca gggtgccgag tgcgtagccc
     1021 accgcggccg ggtcgcccgg accgttggaa agaaagaggc catccggttt tagctcgcgc
     1081 acctcggccg ccgaggtggt cgccggcacg acggtcactc tgcagcccgc cgcaaccagc
     1141 atccggacga tgttccgctt cataccaaag tcataggcga caacatgagg tccgcttccc
     1201 tcggtcgttc tggcctgcac cgtggctcgc gaggccagat ccagcccttc cattgacggt
     1261 gaggcgagca gtcgtgccgt gatctccgga gtcggcgcaa tgccctcggc cacgactccc
     1321 cgcatcgcac cgcgctcgcg cagatgtcga gtcaggcgac gggtgtccac gccctcgatc
     1381 acgggcactc cggccgagct cagccagtct tccagactgc gagtggcgcg ccagttggac
     1441 ggatgccggg aaagctcccg gacaaccact ccgctcactt gcgggaaggg agactccatg
     1501 tcgtcttcgt tcacgccgta attgccgatc atcggcgccg tcatgacgac gatctgtccc
     1561 aggtagctcg ggtcggtaaa cgtctcctgg tatccagtca ggttcgtggt gaacaccact
     1621 tcaccaaacg ccggcggcag tggccgcgcg ctgctgccgg aaaaccaggc gccgtcctcc
     1681 agcaaaacga aagcggggcg atcggtcacc cgatcacccc gctgagtccg atctcggtgg
     1741 tcacttcttc ggttgctgag gagccgaggt gcccggcgcc ggtttggcgg gagcgcccaa
     1801 aggaagaggc gcgggggcgg tcgaaggggc cgcattgctg cccgttgccg gtttggatgt
     1861 cgaaggcgcg ggtgctgctt gaccaggctg gcccaacggc agcggagcct gtgccggagc
     1921 cgcgggactg gccgcccgga gcttttcctg caacgcgctc gagttcccgc cgcgcggaac
     1981 cagcgataac acgagtgaga gtgccaggaa aatgccgccg caccaccagc tcagcttggt
     2041 gagaatggtg accgcttgcc ggccgccgag gacggtttcg gttcccccac cgccgaggga
     2101 ggcgagtccc ccaccctgcc cggcctggag cagaaccacg acggacagga gcagcgcgtc
     2161 gagaatcagg agtgtcacga gaaaggcgaa cattgtgcgg ggaattttag tgagtcgagg
     2221 ggggaaagtc gagagtgtgg tcgcgagcgc acgagtcgcg actttcgact tcactccacc
     2281 tcatcaatcg acctcggcca atcctgcttg agcagtcgcg acaaagaacg atcggccagg
     2341 agccggccgc cggtctggca gcgggcgcag tagttggtct cgttgtccgc gtagcgaatg
     2401 cgctggaccg gggcgccgca aacgggacac ggttgcccga agcggccatg caccgccatg
     2461 ccgtcgcgga atgccgtgac cttctcggga aagtcgtcgc cggcagcttg ttggagccgc
     2521 gcgatccact cacgcaaggt ggagacggtg gcctggtata gagtcgcaac ctgggactcg
     2581 tcgagcttgc tggtgagcag cagcggagac agccgtgccc ggtgaaggat ctcgtcggaa
     2641 tatgcgttgc cgattccgct gaagagccga gggtcggtaa gagctcgttt cagggtgtga
     2701 ttctccgcgg tcagccgctc tcgaaactcg tccaggctcg tctccagcac ttccagccca
     2761 ccgcgcgcga actggctgag cccagcttca cccgtgacca gatggattga cgctcggcgc
     2821 ttactgccgg cctcggtaag atgcagcgat cctccgggga attcgaacac cgcgagcgtg
     2881 agcttgccac cggcgcttcc gcctgccggc cgccaccgaa gtctgccggc gatcatcaag
     2941 tggaccacga taaagagatc gtcttccagc ccgaagacga tacgctttcc catgcgccgc
     3001 agctcgacga ctcgtttgcc ctcgacggca gcgggcgatg gatcgaccga gcggagtaca
     3061 aaaagacttc gaataaggag gcggttcagc ggctcggcga gcacgcgggg acgcagctgc
     3121 tcgagataga gcgtgatgtc gggtagctct ggcacaactc tgcttagctc tggtcgccgg
     3181 tttggcgcca gcgcccaccg acgtaggtgc cggcaatgac ctcgttgccg gctccgaaca
     3241 ctagcgcctc cagcaggtgc tcaggtgtga ctccggccag cgcgggggca ttcaggtcga
     3301 ctgcaaccag atctgcccag cagccgctag tgatggcgcc cgaggccaag ccgagcgcct
     3361 tggctccccc cagcgttgcc gccgcgagca ggaccggcgc aacggctccc ccagtgtcgg
     3421 gcaaggcacc tcgcatctcg tgctgcagtc gctgaccgta ctccagccag cgcatctcct
     3481 ccagcatcgc cagccgattg ttgctgtcgg taccaatggc gagccggctt cccgccgtat
     3541 gcgcctgagc gagacgggga attccgtcgc ccaggttgcc ctcggtcagt gggcacaggc
     3601 agacgatgcc atcagccgcc aggaaccgtt tcatgtcggc atctgcggtg tgggtgcagt
     3661 ggaccgcggt gaaggcgccg tcctcggtgg catcgaggat gacagccatg ggagaccggc
     3721 cataggccgc gttcgattcc tctatctcgc gccgttgctc ttcgacatgc atgtggatgg
     3781 gtaacccgcg cttcaccgcc tcgcgataca agagtgcgat ctcctgagga cctgccgctc
     3841 gaatactatg gggcgcgatg ccaaggctct gggtttgggg atccaggcgg tgg
//
LOCUS       DASRPQ010001081         4453 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4202371, whole genome shotgun sequence.
ACCESSION   DASRPQ010001081 DASRPQ010000000
VERSION     DASRPQ010001081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4453
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4202371"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..443
                     /locus_tag="VFD73_12295"
     CDS             <1..443
                     /locus_tag="VFD73_12295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HZI74775.1"
                     /translation="IKSVDGLKEATGADWTSITVFSDDDRGALPASGSQRTSGMVICP
                     CSMGTVAAVATGSSRSLIERSADVILKERRKLILVPRETPLSLVHLRNLTQAAEAGAI
                     VLPAAPGFYHRPTKVSGLVDFIVQRILDQLDIDITVSRRWGAKA"
     gene            443..1669
                     /locus_tag="VFD73_12300"
     CDS             443..1669
                     /locus_tag="VFD73_12300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74776.1"
                     /translation="MEPEPNLIRRLRWGAVLLCCSLILDGCGGGDNSPTGPEPPIDEG
                     QTPTAGCTDGTLQHGALFRVCFPSTWNGDLVLYAHGYVAPQQSLALPDDNAGGVSVSG
                     TVTGLGYAFGTTSYRANGLVAPDAVDDLVELVDSVKHRYRPDPVRTLVVGFSEGGLVG
                     VLAVERHADRFAGALTGCGPIGDFHAQLNYIDNFRVVFDYYFPGVIPGSPLDVPQSVR
                     DLWETVYVPAILVAFAAHPGAARDLLTVTGVPTAGADIRDLVESAVGLLWYNVFGTAD
                     AQARLGGQPFDNSTTLYSGSSDDAALNAGVQRFTADPAALAGMQRFETTGTLTVPVVN
                     LHTSGDPVVPINQSHLYQAKVQAAGNSNFFFSETDIDRFGHCTFQPAELLSAFNTLRS
                     KVGTASATMTLVQATR"
     gene            1669..2160
                     /locus_tag="VFD73_12305"
     CDS             1669..2160
                     /locus_tag="VFD73_12305"
                     /inference="COORDINATES: protein motif:HMM:TIGR00040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HZI74777.1"
                     /translation="MRLGVIADTHGLLRPEVFQAFAKVDHILHAGDVGPPDLLTELEV
                     LAPVTAVYGNTDGMELRSRLPQVAAMELDGFDIILTHGDQLGSPTPEKLNQAFPDAQI
                     IIYGHTHKPVLTTVDVVVTVMNPGGAGHRRFGLPPSVGILELEPGIPPRGRLLPLLDF
                     DPA"
     gene            2157..2804
                     /locus_tag="VFD73_12310"
     CDS             2157..2804
                     /locus_tag="VFD73_12310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74778.1"
                     /translation="MIALLALLSWVPGGPADTLLIRPLRSVTPPVLAWDSSVLGPPQV
                     QFQTGQGRVLVWLFRWRDTVFLRATIPDSTPYWGDDFVISLDTGGDAASSPQHDDFQW
                     YFRRVTDSSVIYRGGEGRWQAPRGDPDWRLGRERTGGGWEVSTRAERRGWDLLLRLDR
                     AWFTASEERPRIAFRTYDNEPGGWTSWPAPLGGAPATSVEQAPVQWAVVLTQATP"
     gene            complement(2811..3911)
                     /locus_tag="VFD73_12315"
     CDS             complement(2811..3911)
                     /locus_tag="VFD73_12315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74779.1"
                     /translation="MSRARLQPSVPLPAADLEQLQRRVRALAENRAAVYQMFDATGRI
                     VYVGKAKRLRTRLLSYFRAEFPADKAARILYAASDIRWEYMPSEFAAYLGELRQIRKY
                     RPHFNHKANRTRRSVLIKVAGGPAPRVYGGAAINRDDVRCYGPFQSMSRMLEAVRTLN
                     DLLGLRDCASTTPAVFAGQGDLFEQPRQAACMRHELGFCTGPCAGLVSEREYRRRVET
                     AVAFLEGRTIQPIDRVVTAMQQAASEAKFEIAARWREKFEQLEWLLAATSRARSAIDL
                     LTFVYRDPGDLGDDRVYVLKRGVVRASYPYPATPIEHEAFRAVVKEEAQQPAASGAPL
                     PLDAVDEVLLMMAWFRAHPDALRRTTPYEQWM"
     gene            complement(3908..>4453)
                     /locus_tag="VFD73_12320"
     CDS             complement(3908..>4453)
                     /locus_tag="VFD73_12320"
                     /inference="COORDINATES: protein motif:HMM:NF018533.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74780.1"
                     /translation="YAVLQLQLNRGGVLVYRDVRRLGTLLLLDPTGWERYSSAIGPEP
                     LEDDFSAEQLGAALRGSRQAVKKVIMDQRHLAGVGNIYANEALFAAGIDPSKPASRLG
                     PDEHRRLHAEIRRILSAAIQSNGTTFRDYRTGTGEPGNFQLELLVYGREGESCRNCGT
                     RLTGTHAIDARITVFCHHCQS"
BASE COUNT          738 a         1456 c         1415 g          844 t
ORIGIN      
        1 acatcaaatc cgtggacgga ctgaaagagg ccaccggggc cgattggact tcgatcaccg
       61 tgttttccga tgacgatcgg ggcgcgcttc cggcctccgg ctcgcagcga accagcggga
      121 tggtgatttg tccctgctcg atgggtacgg tggctgcagt tgcaaccgga tcgagccgct
      181 ccctgatcga acgctcggcg gacgttatcc tgaaggagcg ccgcaaactg atcctggttc
      241 cccgagagac gccgctatcg ttggtgcatc ttcgcaatct gacccaggct gccgaggcag
      301 gggcaatcgt tctgccagcc gcgccggggt tctatcaccg cccaaccaag gtgagtgggt
      361 tggtagattt catcgtacag cggatcctgg atcagttgga tatcgatatc accgtcagcc
      421 gtcgctgggg agcgaaagca tagtggagcc ggagccgaac ctcatccggc gcctccgatg
      481 gggcgccgtt cttctttgtt gcagcctgat cctggacggc tgtggtggcg gggataacag
      541 cccgacggga cccgagccac cgatcgacga aggccagacc cctaccgcgg gctgtaccga
      601 tggaacattg caacacggtg cgctctttcg ggtctgcttc ccatcgacct ggaacggcga
      661 cctggtcctg tatgcccacg gctacgtcgc cccgcaacag agtctcgcgc ttccggatga
      721 caacgcgggc ggcgtgtccg tttccggtac cgtcaccggg ctcggctacg ccttcgggac
      781 gacgagctac cgggcaaacg gcctggtggc cccggatgca gtcgacgacc tggtggagct
      841 ggtggacagc gtgaagcacc gctaccggcc cgaccccgtt cgaacgctgg tggtgggttt
      901 ctcggaaggg ggactggtgg gagtgctcgc cgtcgagcgg cacgccgatc gattcgcagg
      961 cgcgcttacc gggtgcgggc cgatcggtga tttccacgcc cagctcaact acatcgacaa
     1021 cttccgggtg gtgttcgact actacttccc cggcgtgatc cccgggtcgc cgctggatgt
     1081 tccccaatcg gtgcgggatc tctgggagac ggtctatgtc ccggcaatcc tcgttgcctt
     1141 cgctgcccat ccgggtgccg cgcgcgacct gctgacggtt accggcgtgc cgactgccgg
     1201 agcagatata cgcgatctgg tggagagcgc ggtcggcctc ctctggtaca acgtgtttgg
     1261 gaccgccgac gcgcaggcca ggctcggagg gcagccgttt gataattcaa ccacgctgta
     1321 ttccggctcc tctgacgatg cggcgctcaa cgccggggtc cagcgcttta cggccgaccc
     1381 cgcggcgctg gcgggcatgc agcgcttcga gaccaccggc acgctcacgg tcccggtcgt
     1441 gaacctgcat acctccggcg atccggtcgt ccccatcaat cagtcgcatc tgtatcaggc
     1501 caaggttcag gccgccggca actccaattt cttcttcagc gagaccgata tcgatcgatt
     1561 cgggcactgc acgttccagc ccgccgagct gctgtcggcc ttcaacacgc tccggtccaa
     1621 ggtcggcacc gcgtcggcca caatgacact ggtgcaggct acgcgctgat gcgtcttggg
     1681 gtcattgcgg atacccacgg tctgctccgg cccgaggtct ttcaggcgtt tgccaaggtc
     1741 gatcacatcc tgcatgcggg tgatgtcggc ccgccagacc tgctcaccga actggaagtg
     1801 ctggctccgg tgacggcggt gtacggcaac accgacggga tggagcttcg atcgaggctg
     1861 cctcaggttg ccgcgatgga gctggacggc tttgacatta tcctcacgca cggcgatcag
     1921 ctcggctctc ccacgccgga gaagctgaat caagcttttc ccgatgcgca gatcatcatc
     1981 tacggacata cccacaaacc cgtgctcacc accgtcgatg tggtcgtcac ggtaatgaat
     2041 ccaggcggcg ccggtcaccg ccgcttcggg ttgcctccta gcgtcggcat tctggagctg
     2101 gagccgggaa tcccaccgcg tggccggctg cttccgctgc tggatttcga cccggcttga
     2161 tagcactcct cgcgctcttg tcgtgggttc caggtggtcc ggccgacacc ctgctgattc
     2221 gcccgctccg ctcggtcacc ccgccggttt tggcctggga tagcagcgtt ctcggcccgc
     2281 cgcaggtgca gttccagacc ggacaaggcc gggtactggt ctggttgttt cgctggcgcg
     2341 atacggtgtt cctgcgcgcg accatccccg attcgacgcc ctattggggc gacgatttcg
     2401 tcatcagtct ggataccggg ggcgacgcgg cgtcgagtcc gcagcacgat gacttccaat
     2461 ggtatttccg gcgggtgacc gacagcagtg tgatttatcg cggcggagaa ggtaggtggc
     2521 aggcgccccg gggtgatccc gactggcgcc tcggcaggga gaggacaggc ggcggttggg
     2581 aggtaagtac tcgggctgaa cgacggggat gggatcttct tctgcgtctg gaccgcgcat
     2641 ggttcactgc ttccgaggaa cgtcctcgaa tcgcgtttcg gacgtatgac aacgagccgg
     2701 gcggatggac cagttggccg gcaccgctcg gaggggcgcc cgctacaagc gtcgagcagg
     2761 cgcccgtgca gtgggccgtg gtgcttacgc aagcgacgcc gtaatcttcc tcacatccac
     2821 tgctcgtagg gcgtcgtccg cctcagcgca tcgggatggg cgcgaaacca ggccatcatc
     2881 agcagcactt catccaccgc atccaacggg agcggcgctc ccgatgccgc cggctgctgc
     2941 gcttcctctt tgaccaccgc ccgaaatgcc tcgtgctcga tgggtgtcgc cggataggga
     3001 tacgaggccc ggacgactcc acgtttgagc acgtacaccc gatcgtcgcc caggtcaccc
     3061 gggtcgcggt agacgaaggt gaggagatcg atcgcgcttc tcgcgcggct ggtggcggcg
     3121 agcagccatt ccagctgctc gaacttttcc cgccaccgcg ccgcgatttc gaatttggct
     3181 tcggaagcgg cctgctgcat cgcggtgaca acccggtcga tcggctggat ggtccttccc
     3241 tccaggaacg ccaccgccgt ctcgacccgc cgccggtact cccgctcgga gaccagaccg
     3301 gcgcagggcc cggtgcagaa ccccagctca tggcgcatgc aggccgcctg tcgtggctgc
     3361 tcgaacaagt cgccctgacc ggcgaacacc gccggcgtag tgctggcgca atcgcggaga
     3421 cccagcagat cgtttagcgt gcggaccgcc tccagcatgc gggacatcga ctgaaacggg
     3481 ccgtagcacc gcacgtcgtc ccgattgatt gccgcaccgc catacaccct tggcgccggt
     3541 cctcccgcca ccttgatcag gacggagcgg cgggtgcgat tggccttgtg attgaagtgg
     3601 gggcggtact ttcgaatctg gcgcaactcg cccagatagg ccgcaaactc gctgggcatg
     3661 tactcccagc ggatgtcgct cgcggcgtac agaatgcgcg ctgccttgtc tgctggaaac
     3721 tccgcgcgga agtaactcag caagcgggta cgaaggcgct tcgctttacc cacatacact
     3781 attcggccgg tcgcgtcgaa catctgatag acggccgccc gattctcggc caacgcgcgg
     3841 acccttcgct gcagctgttc cagatcggct gccggaaggg gaacgcttgg ctggaggcga
     3901 gctcggctca cgattgacag tggtggcaga aaacggtgat tctcgcatcg atcgcatgcg
     3961 tgccggtcag cctggttccg caattccggc aggactcgcc ttcccggcca tacaccagca
     4021 gctccagctg gaagttcccc ggctcgccgg tcccggtccg atagtctctg aaggttgttc
     4081 cgttcgactg aatggccgcg gacaggatcc tgcggatttc cgcgtgcagc cggcgatgct
     4141 cgtcaggccc gaggcggctc gccggcttgg agggatcgat ccctgccgca aacagcgctt
     4201 cgttagcgta aatgtttcct acgccggcaa ggtgtcgctg atccatgatc accttcttga
     4261 ccgcctgccg gctcccccgg agcgcggctc ccagctgctc cgccgagaaa tcgtcctcca
     4321 ggggctcggg accaattgcc gagctgtagc gctcccaccc tgtggggtcg agcagcagca
     4381 gagttcccag ccgccgaacg tcgcgataca ccagcacgcc gccccggttc agctggagct
     4441 gcagtaccgc gta
//
LOCUS       DASRPQ010001082         1055 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2322958, whole genome shotgun sequence.
ACCESSION   DASRPQ010001082 DASRPQ010000000
VERSION     DASRPQ010001082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2322958"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..429)
                     /locus_tag="VFD73_12325"
     CDS             complement(<1..429)
                     /locus_tag="VFD73_12325"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012913.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase domain-containing protein"
                     /protein_id="HZI74781.1"
                     /translation="MLHLLFTGGTISMQRDATAGGNVPAHAGETLVGFTPGLEQLGSY
                     RLENWAMLPACHLGPERLWELRERVRSIAQSGEVRGIVITHGTDILEETAYLLDRTLD
                     LPLPVVLTGAMRTSSDSDWDGPNNLLDAARVASSLDSAGRG"
     gene            complement(443..>1055)
                     /locus_tag="VFD73_12330"
     CDS             complement(443..>1055)
                     /locus_tag="VFD73_12330"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZI74782.1"
                     /translation="AHEIQAFGRRTFIGGGDLGDPEVVDRLLAGIRREFGRLDIFVAN
                     AGVWPAEERSLAGLSLARWRETLTANLDSVFLSTRAVLGLMGSGGRIVIVSSTAGQRG
                     EAFHADYAATKGALISLTKSLAIECAPHIQVNCIAPGWVDTEMSAPAFSPENRERIRQ
                     TIPLQRIATAEDVAGPILFLCSDLARHLTGEVLNVNGGSVLCG"
BASE COUNT          196 a          350 c          326 g          183 t
ORIGIN      
        1 tccccgcccg gcactgtcga gactcgaggc gacgcgggcc gcatcgagaa gattgttggg
       61 tccgtcccaa tcggaatcac tcgaggtacg catcgcacca gtcagcacca ccggtagcgg
      121 cagatcgagg gtgcgatcga gcaggtaggc agtctcctcg aggatatcgg tgccatgggt
      181 gatcacgatg ccgcgcacct cgccgctctg agcaatcgac ctcacccgct cgcgcagctc
      241 ccacaaccgt tccggaccca ggtgacacgc cggaagcatg gcccagttct ccagccggta
      301 actcccgagt tgctcgagcc ccggagtgaa gccgaccagc gtctcgccgg catgggctgg
      361 aacgtttcca ccggcggtcg catctcgctg catcgagatg gtgccgccgg tgaagagaag
      421 gtggagcatc agttcccgct cctcatccgc acaacacact cccgccgttc acgttcagca
      481 cttcaccggt gagatggcgg gccagatcgc tgcacagaaa cagaatgggt cccgcgacgt
      541 cctcggcggt ggcgatgcgt tggagcggga tggtttgccg gatgcgctcc cggttttccg
      601 gcgagaatgc gggcgcgctc atctcggtgt ctacccatcc cggagcaatg cagttgactt
      661 gaatgtgcgg tgcgcactcg atggcgagtg atttggtcag agagatcagg gctcccttgg
      721 tggcggcgta gtccgcatgg aaggcttcgc cccgctgacc ggccgtactg gatacgatga
      781 caatgcggcc accgcttccc atgagtccga gtactgccct cgtcgagaga aacaccgaat
      841 cgagattggc ggtcagggtc tcccgccaac gagccagtga gaggccggcc aggcttcgct
      901 cttcggccgg ccataccccg gcattcgcga cgaaaatgtc gagccgcccg aactcccggc
      961 gaattcctgc caacagccga tccaccacct cggggtctcc cagatcgccg ccaccgatga
     1021 aggtgcgacg cccgaatgcc tggatctcgt gcgcc
//
LOCUS       DASRPQ010001083         3473 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1386568, whole genome shotgun sequence.
ACCESSION   DASRPQ010001083 DASRPQ010000000
VERSION     DASRPQ010001083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3473)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3473)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3473
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1386568"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2386)
                     /locus_tag="VFD73_12335"
     CDS             complement(<1..2386)
                     /locus_tag="VFD73_12335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74783.1"
                     /translation="MLVLRYRGRLWVLVVLIAGGVAAEWLRQPSAVWIVAAWLAIPAA
                     AAGLAPLSGWRRWTLTLLLAALAVSLTLTGRQLKAIETRWAQERERRVTAASQHLAGD
                     LHAALHRADRLAEAAISSPAGGRVAAMQLLAKLVPLAGPEMGVVLFDLAGHPWAWAGR
                     HRLPPRTSSDSFAARASGYYVVLEARRHSPDGRSAVASILIWAHPAVPDRERSLAELF
                     RARTEVGLTVYPAGTAPDSADVFDYEEPTTAGPRLLFSVQPVPPEQGAAKELVFHRGS
                     RLIVWLVLASFMVALTLAATPAERFVLLSVVLWLGARAPIGAALGLQPLFSPATFYRP
                     LLGALSASAGVLGLAGIFLTMAGVWLWRRKLGRRWYGIVLGVLLLLVSPYLISSLGRG
                     ITPPSRGVPIGLWLTWQLTLLVSASALIVAAASLFRGNAPESHTRWRIVAGVAIALAA
                     ALIGVVVWSPRGGWPDWYTFLWTPALLLVTLPAPRWATITGVALVAGSSAALVTWGAE
                     LVGRVQVAQRDLARLGAEPDPLALPLLERFAEQAQHARSPANASEMYALWHGSAVGDQ
                     GYPAILALWSTQGKLLDELTLDSLDLPTSQMAGMVRDLPATDSMRIRQIVRTPGVHYV
                     LLVRIAPKTVMSAAIGPRTALIPRGRLGRLLDPTPTNIPLYSLTLSPPGDSVGLTPSP
                     RWRREGWSLRRESPLVLGDTTRLVHARINLRGPVPLLVRGALVVLLDAAVLALLWFAA
                     ELMSGMELMPPHWGRLAQSFRIRLAVTLVAFFILPAVGFAAWGLSRLADEAKRSR"
     gene            2405..3085
                     /locus_tag="VFD73_12340"
     CDS             2405..3085
                     /locus_tag="VFD73_12340"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HZI74784.1"
                     /translation="MTPGAVGERLLQRASLIVPVGTTEQHGPHLPLGCDTIIVERLAD
                     DLSEAFGIPRTPTVEYGVHAAVRPFPGGAALRRRTLHRVMNELIESWEEGAGVREFFI
                     LTAQSSEGHLEALSAIRTDEAKVQVIDILSIDFATLLERPSPVQGGELDTSLLLFLAP
                     QLVRMELAQDFELTPDMLARYRPGQSRHLPRGSPGSVGYPSLATAQKGERLYRFILDR
                     VSSCLVKS"
     gene            3102..>3473
                     /locus_tag="VFD73_12345"
     CDS             3102..>3473
                     /locus_tag="VFD73_12345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74785.1"
                     /translation="MRLAALVLLLQASYAVAQEPAAIKLVIQQAGQQTGSEEFTLRQG
                     RGRGAPGSTLTAAARYPANNPNIQFAATLERTADFGLAKFQLDVEGPNGPTVILAAGT
                     GARLIIRTVGKGSEAGRELPGG"
BASE COUNT          669 a         1152 c         1132 g          520 t
ORIGIN      
        1 cgcggcttcg cttggcttca tcggcaagcc ggctcaagcc ccaagcggca aagcccaccg
       61 cgggcagaat gaagaaggcc accagcgtaa cagccagccg gatgcgaaag gattgggcca
      121 gtcgtcccca gtgcggcggc atcagttcca ttccggacat cagctccgct gcaaaccaga
      181 gcagcgccag cacagcggcg tcgagcagca ctacaagggc gccgcggacc agcaatggca
      241 ccggtccccg caagttgatc ctcgcgtgca ccagccgggt cgtgtcgccc agcacgagcg
      301 gggactcgcg gcgaagtgac cagccctccc tccgccaccg tggcgacggc gtcagcccga
      361 cgctgtcgcc tggtggcgaa agcgtgagac tgtagagcgg aatgttcgtg ggcgttggat
      421 cgagcaatcg tcccaaccgg ccccggggaa ttagtgcggt gcgtggtccg atcgccgccg
      481 acatgacggt cttaggagcg atgcggacca gcagcacgta gtgcactccg ggcgtgcgca
      541 caatttgccg aatccgcatg ctgtccgttg cgggcagatc gcggaccatc ccggccatct
      601 gcgaagtagg aagatcgagg gaatcgagcg tgagctcgtc cagcaatttg ccctgggtcg
      661 accagagcgc gaggatcgcg ggatatcctt gatcaccgac cgcggagccg tgccagaggg
      721 catacatctc ggaggcattg gccggtgatc gtgcatgctg ggcctgttct gcaaagcgtt
      781 ccagcaaagg caacgcaagc gggtcgggct cagcccctag ccgggcgaga tcccgttgcg
      841 ccacctgaac tcggccgacc aactcggctc cccacgtcac cagggcggcg gagctgcccg
      901 ccaccaatgc cacgccggtg atcgtagccc accggggtgc cggtaacgtg accaggagga
      961 gtgctggggt ccacaggaag gtgtaccaat ccggccagcc accacgtggg ctccagacca
     1021 ccacaccgat cagggcggcg gcaagtgcga tggcgacccc ggcgacgatc cgccagcggg
     1081 tatggctttc cggagcattt ccgcgaaaga gcgaagccgc tgcaacaatg agcgccgagg
     1141 cggataccag gagcgtaagc tgccaggtga gccacaaacc tatcggcacg cctcggctgg
     1201 gtggcgtaat gcctcgcccc aagctgctaa tgagatacgg cgacaccagc agcaggagaa
     1261 cgccaagcac aattccgtac catcgtcgac cgagttttcg gcgccagagc cacacccctg
     1321 ccatggtgag aaagatgccg gcgagtccca gcactccagc cgatgcggaa agagcgccca
     1381 gcagagggcg gtagaacgtt gctggagaga agagcggctg gagtccgagt gccgcaccga
     1441 tcggggcgcg tgcgcccagc cagagcacga ccgagagcag cacgaagcgc tccgccggcg
     1501 ttgcggcaag ggtcagcgcg accatgaagc tggcgagaac cagccacacg atcagccggc
     1561 tgccgcgatg aaacaccagc tccttggccg ctccctgctc cggtggtacc ggttgcacgc
     1621 tgaagaggag gcgggggccc gccgtggtcg gctcttcgta gtcgaagacg tccgcgctgt
     1681 ccggcgccgt gcccgccgga tatacagtta gaccgacttc ggtgcgagcc cgaaacagct
     1741 ccgccaggct gcgctcccga tcggggacgg caggatgggc ccagatcagg atgctggcca
     1801 ccgcgcttct gccatccggt gagtggcgcc gtgcctcgag cacgacataa tatccactgg
     1861 ctctggcggc aaacgagtca ctcgacgtgc gtggcggcaa ccgatgtcgt cccgcccagg
     1921 cccaggggtg cccggccaga tcgaagagca ccacgcccat ttccgggccg gccaaaggca
     1981 ccagcttggc gagcaactgc atggccgcga ctcggcctcc ggccggactt gaaatcgctg
     2041 cctcggccag gcggtcggcc cgatgcaacg ccgcgtgaag atctccggcc aggtgctgcg
     2101 acgccgcggt cacccgccgt tcccgctcct gcgcccagcg ggtttctatg gctttgagtt
     2161 ggcgtccagt gagggtaagg cttaccgcca gggcggccaa gagaagcgtc agggtccaac
     2221 gccgccatcc cgacagcggt gccaagccgg ccgcggcagc cggaatcgcg agccacgcgg
     2281 caacaatcca tacggcggag ggctgccgca gccattcggc agccactccc ccagcgatca
     2341 ataccacgag gacccacaga cgaccgcgat aacgcaagac cagcacccct ggcgcttaaa
     2401 ggagatgacc cccggtgcgg tgggcgagcg cctgctgcag cgagccagcc tgattgtccc
     2461 ggtcggcacg accgaacagc acgggcctca cctgccgctc ggctgcgaca caatcattgt
     2521 ggaacgtctg gcagacgatc tgtcggaggc gtttgggatt ccgcgcactc ccaccgttga
     2581 atatggagtg catgcggcgg tgcggccctt tccgggagga gcggcgctcc gacgaagaac
     2641 gcttcaccgg gtcatgaacg aacttatcga atcctgggag gagggggcag gcgtccgtga
     2701 gttcttcatc ctcactgcac aatcgagcga agggcacctg gaagcgctga gcgccattcg
     2761 caccgatgag gcaaaggttc aggtcatcga catcctcagt atcgatttcg cgaccctgct
     2821 ggagcggcct tccccggtcc agggcgggga gctggatacg tccctcctcc tgttcttggc
     2881 cccgcagctt gtgcgcatgg agctggccca ggacttcgag ctcacgcctg acatgctggc
     2941 ccggtaccgt cccggtcaga gccgacatct tcctcgcggc tctccgggat cggtgggata
     3001 tccgagcctc gccaccgccc agaagggcga gcgcctgtat agatttatcc tcgaccgggt
     3061 cagcagctgt ctggtcaaat cctgatacca tcggagtcgc catgcgcctc gccgcgctcg
     3121 tgcttctgct ccaggcgagc tacgccgtcg cccaggagcc tgcagccatt aagctggtca
     3181 tccagcaggc cgggcagcag accggaagcg aagagttcac gctccgccag ggacgggggc
     3241 gaggtgctcc gggaagtacc ctgacggctg cggcccgcta tcctgccaac aaccccaaca
     3301 tccagttcgc ggccacgctc gagcgtaccg ccgattttgg gttggccaag ttccagctgg
     3361 atgtggaagg tccgaacgga ccgaccgtca tccttgccgc aggcacggga gcgcggctca
     3421 tcatccgcac tgttgggaaa ggctcggaag cgggacgcga gctgcctggc gga
//
LOCUS       DASRPQ010001084         1290 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2949813, whole genome shotgun sequence.
ACCESSION   DASRPQ010001084 DASRPQ010000000
VERSION     DASRPQ010001084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2949813"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..254)
                     /locus_tag="VFD73_12350"
     CDS             complement(<1..254)
                     /locus_tag="VFD73_12350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74786.1"
                     /translation="MTRAAPDKVWSVVQATDRLGEWTDAVVVSVEPPGPAQPGQVIRM
                     GGRALGRDWLFSIDVGGVDPQHRWIDLVVHLPFGIQNYEHL"
     gene            complement(278..628)
                     /locus_tag="VFD73_12355"
     CDS             complement(278..628)
                     /locus_tag="VFD73_12355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74787.1"
                     /translation="MLQAAKFPSELRIHRIWEPMRASDDRRPIAFVTERRRRSIGAGV
                     MAVGLLEVLAILLLHLAVLLIFVGVLISLAGGLYANGGRAGFYEVEADGSLGAYLGRA
                     RPDLGSMRSRGPGA"
     gene            complement(628..>1290)
                     /locus_tag="VFD73_12360"
     CDS             complement(628..>1290)
                     /locus_tag="VFD73_12360"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI74788.1"
                     /translation="IEMNTSTDAAGTELEVHGLWAGYGAKDVLEDYELVISRGESVRL
                     TGRNGSGKSTLLSCIAGSHKPRAGSILVSGISLMDRPVDAKRLIGSSNGTCPFPYLTG
                     RENLEVARRVYGLPAKQVERLLERFAAWESVRSLHDEVRTYSHGMRQQLALLLATVHE
                     PPLVLLDEATDGLDKESQADWSRYLNERAESGGTLIYVAHKDGVASGFPVGRSIKLTR
                     GQ"
BASE COUNT          227 a          454 c          386 g          223 t
ORIGIN      
        1 aggtgctcat agttctggat gccgaagggg aggtgcacga ccaggtcgat ccagcggtgc
       61 tgcggatcga cgccgcccac gtcgatcgag aacagccagt cccggcccag cgcccgacca
      121 cccatccgga tcacctgacc gggttgcgca gggccaggtg gctcgacgct gacgaccacg
      181 gcgtccgtcc actcgcccaa acgatccgtc gcctgtacca ccgaccagac tttgtccggc
      241 gcggccctgg tcaccgccgc cggacaaacg ttgacgatca ggctccaggt cccctggagc
      301 gcatcgagcc gagatcgggc cttgcccgcc cgagataggc accgaggctt ccatcggctt
      361 cgacttcata gaaccccgcg cgcccgccgt tcgcatagag accaccagcg agcgagatca
      421 ggaccccgac aaagatgagc aggacggcca ggtgaagcag gagtatcgca aggacctcta
      481 gcaggcccac ggccatcacg cctgcgccga tcgatcgcct gcgtcgctcg gtcacgaatg
      541 cgatcgggcg gcggtcgtcg gacgcacgca tgggctccca gatccggtga atccgcagct
      601 cggatggaaa cttcgccgcc tgcagcatca ctgccccctt gtcagtttga tcgaccgacc
      661 caccggaaac ccgctggcaa ccccatcctt gtgggccacg tagataagtg tgcccccgga
      721 ttctgcccgt tcgttcaggt atctggacca gtcagcctgg ctctctttgt cgaggccatc
      781 cgttgcttcg tccagaagca caagcggcgg ctcgtgcacg gttgcaagca ggagcgcaag
      841 ctgttggcgc atcccgtgcg aataggtgcg tacctcgtcg tgcagcgagc gcacgctctc
      901 ccaggccgcg aaccgctcga ggagcctctc cacctgtttg gccggcaggc catagacgcg
      961 cctggccacc tccaggttct cgcggcctgt cagatacggg aaggggcacg tcccgttgct
     1021 cgacccgatc aggcgcttgg cgtctaccgg cctgtccatc aacgagatac cactgacgag
     1081 aatgcttccg gcgcgcggct tgtggctgcc cgcgatgcag ctcagcagag tgcttttgcc
     1141 tgacccgttc cggccggtca gcctcacgct ctcgccgcga gagatgacca gctcatagtc
     1201 ctcgagcaca tctttcgcgc cgtagccggc ccacagcccg tgcacctcga gctctgttcc
     1261 ggcagcgtcg gtgctggtgt tcatctcgat
//
LOCUS       DASRPQ010001085         1009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2022631, whole genome shotgun sequence.
ACCESSION   DASRPQ010001085 DASRPQ010000000
VERSION     DASRPQ010001085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2022631"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(303..869)
                     /locus_tag="VFD73_12365"
     CDS             complement(303..869)
                     /locus_tag="VFD73_12365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74789.1"
                     /translation="MRTKAPVEWTGIAIQTTDQAEVTTDLGVTNLRRTSWASGTELID
                     DIAHGEAGRLSTVVITPAIEGWTLVVGPWCWLPFLQSAGPLTNLCKMLSARFGKAQAY
                     FHSEQDDGEAWLIAENGQVIRRWVGEYPELALGDPFGVERQLLNAYGIPGKPEDLDPD
                     DDKLSEWIGGWATALQQRSRRNRAWTRH"
BASE COUNT          185 a          338 c          297 g          189 t
ORIGIN      
        1 agcatcttga gccaagctca gcaagccgcg actggctggg agacatccga aagcccagcg
       61 gcttcctgag cccgcgccta ccgctgcggg ctcagccact gccgcgatac cggctctttc
      121 agccagagtg ccgcgatcac gccgtcccgt caggtcctat agcactacgt cttgactctg
      181 gcatgatccg catgttgtga gccggtgcgc aaatcagggc tgcccgcctt gaagcttcgg
      241 gtagtcaatc gctggcgcgc tggccactag catcagcccg gacaccttgg tggcagggcc
      301 aatcaatgtc gggtccaggc tcgattccgc cgcgaccgtt gttgcaaggc agtcgcccat
      361 cctccgatcc attcgctgag cttgtcgtca tccgggtcca ggtcctcagg cttgccgggg
      421 atgccgtagg cattcagaag ttgccgttcg actccgaacg ggtcgcccag ggccagttcg
      481 ggatactcgc ccacccacct cctaatgacc tggccgttct cagcaatcag ccaggcctcg
      541 ccgtcgtcct gctcgctgtg gaagtacgcc tgcgccttcc cgaatcgtgc gctgagcatc
      601 ttgcacagat tcgtgagggg accagcactc tgaagaaagg gcagccagca ccaagggcca
      661 accaccagcg tccagccctc gatggccggg gtgatgacca cagtggagag ccgcccggct
      721 tcgccgtgtg cgatatcgtc gatgagctcg gtgccgctgg cccacgaggt ccgccgcaga
      781 ttggtcacgc ccaggtcagt tgttacttca gcctggtcgg tggtctggat cgcgatgccg
      841 gtccactcga ccggcgcttt agtgcgcaag ttcggcctcc acgaacaaca aacgcgcagg
      901 tcatcagccc gcgaaaccgg tcacgcccaa aacttggccc aactcaggtc gtataggcga
      961 cgtcctcatt tcggcatatg agcaagacgc cggcgggtgg cagacctaa
//
LOCUS       DASRPQ010001086         1040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1387132, whole genome shotgun sequence.
ACCESSION   DASRPQ010001086 DASRPQ010000000
VERSION     DASRPQ010001086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1387132"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..817
                     /locus_tag="VFD73_12370"
     CDS             <1..817
                     /locus_tag="VFD73_12370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74790.1"
                     /translation="ATQILTAAGVDPGAISNFIATFFPPSQQPAYSDFTSPTWGTGYS
                     AGEQSYRDQSSVSEPPDSSAAWAQLQALIDARHSSGPVAPPVYVWSAAHNPWQNHQPI
                     DPPADGCLPDVPGQKSCPLYSPMTQYPVVAGSPLCQKVCAAYRNDTRQDANGSPTNIQ
                     VGYSCDAALCTTLGNGQNSPVQINPLAKANLLQNACGGLAGQSGLRAILALEQIDHCS
                     CCASQVCGCANAGTDIDPDTQAEIAGLNAAQQQLGITPQCQINGTLCGAQPPP"
BASE COUNT          202 a          336 c          314 g          188 t
ORIGIN      
        1 agccacgcag atattgaccg cggccggtgt cgaccccggg gcgatctcga attttatcgc
       61 gacattcttt cccccgagcc aacagccggc gtattccgat ttcaccagcc cgacttgggg
      121 aacgggctac tccgccgggg agcaatcgta tcgggatcag agcagcgtct ccgaacctcc
      181 cgatagttcc gccgcctggg ctcaactcca ggctctgatc gatgcccgtc actccagcgg
      241 gccggtagct ccgccggtgt atgtctggtc ggcggcccac aatccgtggc aaaaccatca
      301 gccaatcgat cccccggccg acggctgttt gcccgacgtg ccgggtcaga aatcctgtcc
      361 gctttattct ccgatgacgc aatatcctgt cgtcgcggga agccccctct gccagaaggt
      421 gtgtgccgcc tatcgcaatg atacccgcca ggacgccaac gggtcgccca cgaacatcca
      481 ggttggctac agctgcgacg cggcgctgtg tacaaccctc gggaatggcc agaactcgcc
      541 ggtgcagatc aatcctctag caaaggccaa cttgctgcaa aacgcttgcg gcggcttggc
      601 cgggcagagc gggttgcggg ctatcctggc gctcgaacag atcgaccatt gcagctgttg
      661 tgcaagccag gtctgtggtt gtgccaatgc cgggaccgac atcgaccctg atacgcaagc
      721 agagatagcc gggctgaacg ctgcgcagca acagctggga attacgccgc agtgtcagat
      781 caatggcacc ctatgcggcg cacagccacc accttaacac tggctccacg ccgccttcgt
      841 gtttgagaac tttcgggtga gggttaagcc tcaggcgaga agaacacgag cgtgcgcacc
      901 tcgaggctct cgcgaggcgg cgcggccggg gccgaagtcg gatcgtcgaa gccggtatgg
      961 gcggaaaacc gcgctgctcc ctcgggtgcc gagtcgaagc agcggatcag cacggcttcg
     1021 tctgctcgca ttctcgggaa
//
LOCUS       DASRPQ010001087         1692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_131102, whole genome shotgun sequence.
ACCESSION   DASRPQ010001087 DASRPQ010000000
VERSION     DASRPQ010001087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131102"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1416
                     /locus_tag="VFD73_12375"
     CDS             <1..1416
                     /locus_tag="VFD73_12375"
                     /inference="COORDINATES: protein motif:HMM:NF003715.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HZI74791.1"
                     /translation="SVAFSRASQRTGVPIALLFIVVGMLAGSEGLGHIAFDDYHFAFR
                     IGTVALALILFDGGLNTPLHTVRKAAAPAGVLATVGVAGTAMLVALVAHTLGLGWPEA
                     LLLGAVVSSTDAAAVFAVLRGSGLQLKRRVGVTLELESGINDPLAVILTMTLTANLVS
                     SGAASAGRMVFEVLLQLVAGTVIGVAVGYGGRYLLSRLSLITGGLYPVFTLALALFGF
                     GAGTVLHGSGFVSVYLVGLILGNGPLPYHTGLLRVHDALAWLSQVGMFLILGLLVYPS
                     HLLQVAGIGLGIAALLVFIVRPLVVALCLAPFRYPLKEVLYIGWVGLRGAVPIVLATF
                     PVLAGAPGAERLFDLVFFIVVATALVPGATVAGVTRRLGLQSREPPAPQAVLAIESRQ
                     PLQGDLLSFYIDEALVVAGMPVEELPLPEGAAVTLILRNNRLLPPTPQTVLQAGDHVH
                     LIAQPEDRGLIQLLFGRPEEE"
     gene            complement(1432..>1692)
                     /locus_tag="VFD73_12380"
     CDS             complement(1432..>1692)
                     /locus_tag="VFD73_12380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74792.1"
                     /translation="AHPGGMREVSDGYGVWVPAGRAVNPVTGKDWEGTGVIPDVPVSA
                     EAALRTAHVRALRKILASERDPKRQETLRQVIEQVSSGSESS"
BASE COUNT          215 a          581 c          547 g          349 t
ORIGIN      
        1 agcgtcgcct tcagccgcgc ttcccagcgc accggtgtac cgattgcgct cctgttcatc
       61 gtggtcggga tgctggccgg gtccgaaggc ctggggcaca tcgccttcga cgactaccat
      121 ttcgcgtttc ggatcgggac cgtcgccctg gccctgatcc tcttcgatgg cggcctcaac
      181 actccactcc ataccgtgcg caaggccgca gctcccgccg gtgtgctcgc caccgttggt
      241 gtcgccggta ccgccatgct tgtcgcactc gtggcccaca cgctcgggct cggctggccc
      301 gaggcgctcc tgctcggtgc ggttgtttcc tcgaccgatg ccgccgcggt cttcgcagtg
      361 ctgcggggca gcggtctcca gctcaagcgc cgggtaggtg tcacgctcga gctggaatcc
      421 ggcatcaacg atccgttggc cgtgattctc acgatgacgc tgactgcgaa cctggtttcg
      481 tccggcgccg cctccgccgg ccggatggtc ttcgaggttc tgctccagct cgtggccggc
      541 accgtgatcg gtgtcgccgt tggctacggt gggcgatacc tgctgtcgcg cttgagcctc
      601 atcaccggcg gactctatcc cgtctttacc ctcgcgcttg cactcttcgg cttcggcgcg
      661 ggaacggtgc tgcacggaag cggattcgtg tcggtgtacc tcgtcggcct gattctgggc
      721 aacggtccgt tgccgtatca cacggggctg ctccgggtcc acgacgctct cgcctggctc
      781 agccaggtcg gcatgttcct gatcctcggg ctgctggtgt atccgtcgca cctgcttcag
      841 gtcgccggca tcggactcgg catcgccgcg ctgctcgtct ttatcgtgcg gccattggtg
      901 gtggcgctct gtctggcgcc gtttcgttat cctctgaaag aggtgctcta catcgggtgg
      961 gtcggactcc ggggcgcggt gccgatcgtg ctggcgacct ttcctgtgct ggccggcgct
     1021 cctggcgcgg agcggctctt tgacctggtg ttcttcatcg tggtcgcaac tgcgctggta
     1081 ccgggggcaa ctgtcgccgg ggtcaccagg agactggggc tgcagagcag ggagccaccg
     1141 gcgccccagg cggtgctggc catcgagtcg cgccagccgc tccaggggga ccttctgtcc
     1201 ttctatatag atgaagcgct ggtggtggcc ggcatgccgg tagaggagct gccgctgccg
     1261 gagggtgccg ccgtgactct gatcctccgg aacaaccggc tgctgccgcc cacgcctcag
     1321 acggtgctcc aggcgggcga tcacgtgcac ttgatcgcgc aacctgagga tcgcgggctg
     1381 atccagctct tgttcggaag gcccgaagag gaatgagcgt ctccgcgccg ctcatgagct
     1441 ctctgagccg gacgagacct gctcgatcac ctggcgcagt gtctcctgcc gcttcggatc
     1501 ccgctcggac gcgaggatct ttcgaagcgc ccgaacatgc gccgtccgga gcgcggcctc
     1561 ggccgagacc ggaacgtcgg ggatcactcc ggtgccttcc caatccttgc cggtcactgg
     1621 attcaccgcc cgtccagccg gcacccagac cccgtatcca tcggaaacct cccgcatgcc
     1681 ccccggatga gc
//
LOCUS       DASRPQ010001088         1074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3281034, whole genome shotgun sequence.
ACCESSION   DASRPQ010001088 DASRPQ010000000
VERSION     DASRPQ010001088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3281034"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..213)
                     /locus_tag="VFD73_12385"
     CDS             complement(<1..213)
                     /locus_tag="VFD73_12385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74793.1"
                     /translation="MRTNTSLRLVTAPYVADLHDSVARAGSCQVRAQIRVGLPEDSTG
                     WVNCAELLSAPEAFTLWRQELAGWLHD"
     gene            495..>1074
                     /locus_tag="VFD73_12390"
     CDS             495..>1074
                     /locus_tag="VFD73_12390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003419511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
                     /protein_id="HZI74794.1"
                     /translation="MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGV
                     AAKALESLGIALEGVRQQVEEIIGQGQHAPSGHIPFTPRAKKVLELSLREALQLGHNY
                     IGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVLQLLSGYQGKEPAETGGRGEGT
                     PSSSLVLDQFGRNLTASAREGKLDPVIGRAKEI"
BASE COUNT          197 a          333 c          366 g          178 t
ORIGIN      
        1 gtcgtggagc caaccagcca gctcctgacg ccagagagtg aaggcctcgg gtgcggacag
       61 tagttccgcg cagttcaccc agccggtgga atcctccggc aggccgaccc ggatctgggc
      121 cctgacctgg caggacccgg cgcgggccac ggagtcgtgg aggtcagcga catacggggc
      181 cgtgacaagc cgtaggcttg tgttggtccg catgggtggc ctccatggtc attttaggtg
      241 agcctagcct aagtctaacc gacatccatg atcgtcgcga gtgctgggga aaacctgttc
      301 gcgctcagct gacacacata tgtggcggaa tcctccctcg ttcccgcacg ttgttcctta
      361 cgaaggttca cggatagccg caagtggtac tgagagcgac aggctggacg actacagtgg
      421 tcttcacggt gctgacccca ccgcacggca caagcggtgg ataagggccg ccggcgcagc
      481 agtcaggagt gcagatgttt gagaggttca ccgaccgcgc gaggcgggtg gttgtcctgg
      541 cccaagaaga ggccaggatg ctcaaccaca actacatcgg caccgagcac atcctcctgg
      601 gtttgatcca tgagggtgag ggtgtcgccg ccaaggcgct cgagtcgttg ggtattgccc
      661 tcgagggcgt gcggcagcag gtcgaggaga tcatcggcca gggccagcac gcgccgagcg
      721 ggcacatccc cttcacccca cgggccaaga aggtcctcga gctgtcgctg cgggaagcgt
      781 tgcagctcgg acacaactac atcggtaccg agcacatcct cctgggtctc atccgggagg
      841 gcgagggcgt ggcggcccag gtgctcgtga agctcggtgc cgacctcaac cgcgttcgcc
      901 agcaggtgct gcagttgctg tccggttacc agggcaagga gcccgcggag accggcggcc
      961 gcggcgaggg cacgccgtcc tcctcgctgg tgctcgacca gttcggccgc aacctcaccg
     1021 cctcggcgcg tgagggcaag ctggacccgg tcatcgggcg cgcgaaggaa atcg
//
LOCUS       DASRPQ010001089         1783 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2324064, whole genome shotgun sequence.
ACCESSION   DASRPQ010001089 DASRPQ010000000
VERSION     DASRPQ010001089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2324064"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            325..1698
                     /locus_tag="VFD73_12395"
     CDS             325..1698
                     /locus_tag="VFD73_12395"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HZI74795.1"
                     /translation="MGKSAYDGFVAADIYPKWKRRIAAATESVRVYCPYLDRLAVDLL
                     GNSVLGPENVAVVTDLSPESGAFDYRGQLLAMRRLISSGIEVRSLPRLHAKVLLVDGW
                     QVTLGSQNFTGYARRSKETSLAADTDLGASSFVRILNKWFDEAVPVDGGLVDRLLERL
                     EQPMAHVREAIQDLVNSFGDVERSYRSEVRRRFEEHLAQARLRSPAEALRAAALKSRF
                     SAGQAVAWAHLDWVGSGEYRSLLVSRRDLDLTNWRSPDGSNVRLEHLKFYPALLGPDG
                     RLAFVRVAESRITYVWRGVLWGATQRIGSMNLFLQTTFLDDQEDGANVQVEFSREHGG
                     INAFALRMRFDGDAALPVAEGYIIGHPYRQDVLRNTVMEAYEDTESWEGVLREIFAPV
                     LNPSGFRNDKNADSFFPPGWLCIGLSKFLEQPVLLIRPREGVLGSVPDPVCSSSDATL
                     RRSPTLS"
BASE COUNT          325 a          524 c          564 g          370 t
ORIGIN      
        1 gcagtggtca tcgggtacct cccggccagg ctggaaccgg gcacgctggg ccagtcccgg
       61 tcccagcagc tcaacggaac ccaaacgtaa gccgctctgc cgggatcaca ctacgccggc
      121 agcaagctgg tcaaaggcca cccgggaagt gctccatacc gctgagtatg ggtgccttcc
      181 aactggttgg atcaggagaa gcgtctggcc acatttcatg cactccggcg cccgcgtcaa
      241 cactgtcaac gtcggctggc gagcgatggc cagagtgatc gccttttgga tcttggaccg
      301 ccttcggcat ggaagactcg ctgcgtgggg aagtcagctt atgacgggtt cgtggctgcc
      361 gacatctatc caaagtggaa gcggcgcatc gctgcagcca cggaatcggt tcgggtctac
      421 tgcccgtatc tcgatcgcct ggctgtagat ctgctgggaa actcggttct agggccagag
      481 aatgttgcgg tagtcactga cctatcacct gaaagcgggg ccttcgacta tcgcggtcag
      541 ctactggcca tgcgtcgcct catctccagc gggatcgagg tgaggtccct tccgagattg
      601 cacgccaagg tcctgttggt agacgggtgg caggtcactc ttgggtcgca gaacttcacc
      661 ggctacgcgc gcaggagcaa ggagacctcg ctggctgccg ataccgacct cggcgcatct
      721 tcctttgtca ggatcctgaa caaatggttc gatgaggctg tgccggtcga cggcggcctc
      781 gttgaccggc tcctcgagcg tcttgagcaa ccgatggcgc acgtccggga agcgattcag
      841 gatctggtca attcgttcgg tgacgtcgag cgcagctatc gcagcgaggt gcggcggcgg
      901 ttcgaggaac acctggctca ggcgcgcctg cgctctccgg ctgaagcgtt gcgggcggcc
      961 gccttgaagt cacgcttctc ggcggggcag gcagtcgcgt gggcccacct ggactgggtc
     1021 ggatcaggcg agtacaggtc gcttcttgtc agcaggcggg atctggatct gaccaactgg
     1081 cgctcgcccg atggctcaaa cgtccgcctt gaacatctga agttctatcc ggcactgctc
     1141 gggcccgacg ggcgactcgc cttcgtccgt gttgccgagt cacgcatcac ctatgtctgg
     1201 cgcggagtgc tctggggagc cacgcagagg atcggatcta tgaatctctt ccttcagact
     1261 acgtttctag atgaccagga agatggcgcc aacgtccagg ttgagttctc gcgggagcac
     1321 gggggcataa acgctttcgc gctgaggatg cgctttgacg gtgacgctgc attgccggtt
     1381 gccgagggtt atatcatagg tcatccttac aggcaggacg ttctcaggaa cacggttatg
     1441 gaggcgtacg aggatactga gtcgtgggaa ggcgtgctaa gggagatctt cgcgccggtg
     1501 ctaaatcctt ctggcttccg gaacgacaag aatgccgatt ccttctttcc tcccggctgg
     1561 ctctgtatcg gcctgtcaaa gttcttggaa cagccggtcc ttctgatccg gccgcgcgaa
     1621 ggagtactgg gcagcgttcc cgatccagtc tgcagtagca gcgacgccac actgcgcaga
     1681 tcgccgactc tgtcttgatc cccaagccgc gctagcggcg gcgcgcggct cgcagatcaa
     1741 ccagttctat acggttctgg atgactaact tgccgaggat gac
//
LOCUS       DASRPQ010001090         2113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2950815, whole genome shotgun sequence.
ACCESSION   DASRPQ010001090 DASRPQ010000000
VERSION     DASRPQ010001090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2950815"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..437
                     /locus_tag="VFD73_12400"
     CDS             <1..437
                     /locus_tag="VFD73_12400"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HZI74796.1"
                     /translation="VLKRWARNAFFPNFRITLLRWCGFTIGDEVYIADDLIIVEELAD
                     RNNLTIGDRVSIAPRVTLVTSSHPNDSKIRGFAPVARGPIVIEPDAWLGAGCVILPGV
                     RIGRGAVVGANSVVSSDVPPLHVVVGQPARTVRELQPGEDWQ"
     gene            434..1897
                     /locus_tag="VFD73_12405"
     CDS             434..1897
                     /locus_tag="VFD73_12405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74797.1"
                     /translation="MIRIDVDQNRLRPSERFGLDLLLDLSRLLVAEQSDCDLVRLTLL
                     ERGSAGSAAADVSPHAALERGEGEVRVTLAALQGIAEIAGGAAEQRSTARDRHGRIPA
                     AENPLVASGQSRHPVVSKLAVELRRAVLAVAGRRPVRSVIPWPEGHRWAALLSHDLDV
                     VDWWGLFSLLRMLELGMKGSWDFMSRSASAARRSLRRDPVGRGVHSLLQLEAHHGIRA
                     TWFIICARPTLRSMAAGDVTYRPDSPAARRIISALMQAGHEIGLHGSFGTGSDAKRLT
                     TERRTLARLANTPVSGVRQHFLRMQPGRTQEHMVEAGFEYDATWGYADRNGFRLGVAD
                     IVPAWSASRETRLPLDLVPLTWMDRALSKYAGVEEPGRWVEDARELVRECKAVEGLWV
                     GLWHPNMTEALGFPGAEPAFVSLLQSLADDRPYFASAQRLLQWRRFRRSVRAARVTAD
                     GRVFLTSAGHRTVIALEDESGDTTQVQVQSGRAGGAA"
     gene            1884..>2113
                     /locus_tag="VFD73_12410"
     CDS             1884..>2113
                     /locus_tag="VFD73_12410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74798.1"
                     /translation="MARPKLWRIVQFAAGALLVGLAIRSIAANWQSLRAQRIDWQLSP
                     GLIVASMLVVFTAYAVLVEAWRRVVLSMGQRLP"
BASE COUNT          336 a          650 c          728 g          399 t
ORIGIN      
        1 aggtgctcaa gcgctgggcc cggaatgcgt tcttccccaa cttccggatc accctcctgc
       61 ggtggtgcgg cttcaccatt ggcgacgagg tttacatcgc ggacgatctc atcatcgtgg
      121 aagagttggc cgaccgaaat aatctcacaa tcggtgatcg ggtgagcatt gctccgcggg
      181 tgacgctggt gacatcctct cacccgaatg actccaagat ccgcgggttc gctcccgttg
      241 ctcggggccc gattgtcatc gagccggacg cctggctggg cgcgggctgc gttatcctgc
      301 cgggtgtccg aatcggtcgc ggagccgtcg tcggggccaa tagcgtggtg tcttccgacg
      361 ttccgcctct ccatgtggtc gtggggcagc ccgcacgaac agtgcgcgag ctccaaccgg
      421 gagaagactg gcaatgatcc gaatcgatgt ggaccagaat cggctccggc cgagcgagcg
      481 attcggtctg gatctgctgc tggatctgtc gcggctcctg gtcgccgagc agtccgactg
      541 cgacctggtc cgcctgaccc tcttggagag agggtccgca ggatcagccg ccgccgatgt
      601 gagtccgcat gctgccttgg agcgaggcga gggagaggtc cgcgtcacat tggctgccct
      661 ccaagggatc gctgaaatcg cgggcggagc agcagagcag cgctcgaccg ccagggaccg
      721 acatggccgg attccggcgg cggaaaatcc gctggtggcc tcggggcaga gccgccatcc
      781 ggtcgtctcc aaactcgcgg tggaattgcg gcgtgcggtg ttggccgtgg ctggtcgccg
      841 gccggtccgg tcggtcatcc cttggcctga aggacaccgt tgggctgctc tcttgagcca
      901 cgacctcgac gtggtcgact ggtgggggct cttttccctc ctgcgaatgc tggagctcgg
      961 catgaaaggc tcctgggatt tcatgagccg gagtgcaagt gcggcccgcc gcagcctgcg
     1021 acgggacccg gtaggccgcg gagtgcattc attgctgcag ctcgaggcgc atcacgggat
     1081 tcgggcaacc tggttcatca tctgcgctcg ccccaccctt cgatcgatgg ccgcgggaga
     1141 cgtaacgtac cggccggaca gccctgctgc ccggcggatc atttccgccc tgatgcaggc
     1201 tggccatgag atcgggttgc atggcagctt cggcactggt tccgacgcca aacgactgac
     1261 aactgagcgg agaacgctcg cgcgactggc gaatacgccg gtttcgggag tgcgccagca
     1321 ctttctccgg atgcagccgg gccggaccca ggagcacatg gtggaagcgg gattcgagta
     1381 cgatgccacc tggggatacg ccgatcgaaa cgggtttcga ctgggggtcg ccgatatcgt
     1441 gccggcctgg agcgcaagcc gggagacccg acttcctctc gacctggtgc cgctcacctg
     1501 gatggatcgc gcgctcagca agtacgccgg cgtcgaagag cccggccgct gggtcgagga
     1561 cgcgcgagag ctggtgcggg agtgcaaggc agtggagggc ctttgggttg gactctggca
     1621 ccccaacatg acggaagctc ttggcttccc cggtgcggaa ccggccttcg tcagcctgct
     1681 tcagtctctg gccgacgatc gaccatactt tgcatcggct cagaggctgc tgcagtggcg
     1741 ccgttttcgg cgctcggtcc gtgcagcacg ggtcaccgcc gacggtcggg tgttcctcac
     1801 ctctgccggt caccgaacgg tgattgcatt ggaagacgag tccggcgaca ccacacaggt
     1861 gcaggtgcaa tcaggcagag ctggtggcgc ggcctaagct ctggcgcatc gttcagttcg
     1921 cggccggcgc gctgctggtc ggactggcga tccgctcgat cgcagcgaac tggcagagcc
     1981 tgcgggcgca gcgaattgat tggcagctgt caccggggtt gatcgtcgca agcatgctcg
     2041 tcgtctttac cgcttacgcc gtgctggttg aagcgtggcg ccgcgtggtg ctcagcatgg
     2101 ggcagcggtt gcc
//
LOCUS       DASRPQ010001091         3377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1070190, whole genome shotgun sequence.
ACCESSION   DASRPQ010001091 DASRPQ010000000
VERSION     DASRPQ010001091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3377
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1070190"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2323)
                     /locus_tag="VFD73_12415"
     CDS             complement(<1..2323)
                     /locus_tag="VFD73_12415"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis tyrosine autokinase"
                     /protein_id="HZI74799.1"
                     /translation="MPEYYPQPRQLPAGPMHPDGGYDHSAPAGDAVSLGQLFRVIRRR
                     YKLIVLVTLLGLGAGAFLAAKTPASYRAMSTIRLANERRAITEQFEDQPSENISPRTM
                     DPILSLAQGARSYSVLGAVVDSLGLQLNSDTPEFGIGKLDKVWVNPQTANDTIQVAFY
                     QNGVKAQLRNREARGHYGDVLDLGSVRFAVRAVPDIPSATLHTIPRQMAADNLFNNLQ
                     VIPRAGTDVIDVSYISPNPRMAQNIVNTTVTVFKHLSIENAKQMSTRRRQFLEGQLKQ
                     TDSMLARAQAELASFRSRQQLASTQAALDRQQTDMMTLDERRVELEADRQTFGSLMDQ
                     LKKGGDSTESEALRALAASPAMAENPKVNDLFHQLEVNQYKVDSMTTGPWRAAPTNPD
                     LIQLKAQMASTKTQLRQAVASHVSTLDSRIAALRKLRTQQGSALQLLPAMAEEEARLT
                     GRVQTLTSTSDEVRKDYQKARMAEEVEAGDLDIVDLAGTPYAAIWETAPLKLALGLLL
                     GLLLGVGGAFLLEALNTSIRKPEDLEVALHVPGLAVIPRLSSGTSPAAGRRLLRPGKR
                     AELDKRANASALGTVTQPFSIGVEAFRMLRTSLVWCEQGDSMKTLVVTSAAPGEGKTL
                     TSANLSVTFAYDGLRVLLVDCDVRRPRLHGLFQVPRSPGLMELLTPSYNGNDASQSLT
                     FNPTEGRTDSGRPVTDVIRPTNVRGLSLLTCGALPTNPSGLLSGVRMRVLLQELAKSF
                     DLVILDTPPVLATADAGILGSLADGVLLVVRAGQ"
     gene            complement(2328..2984)
                     /locus_tag="VFD73_12420"
     CDS             complement(2328..2984)
                     /locus_tag="VFD73_12420"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015774 - polysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HZI74800.1"
                     /translation="MRKLLRQSLLLIAVPLISTTVLAQSAAPTADQVTLSPGDSVRVV
                     VWRKPEMSGDFIVGPDGTITHPLYQAVRVGGVPFPTAETNVRNFLARFEQDPQFVMEP
                     LVRVAVSGEVGRPQVFAVRPETSIADAVAQAGGPNQFANRKQVRVLRKDNNGRQHEFF
                     INLLDTQGSSAAARVHSGDQIVVDRRKSFFRDILLPSFTVIGSIASIYLVIERAQRNP
                     "
BASE COUNT          665 a         1044 c         1076 g          592 t
ORIGIN      
        1 tttgacccgc ccgcaccacg agcagaacac catccgccag cgagcccagg atgcctgcgt
       61 cggccgtggc cagcaccggc ggggtgtcca gaatgaccaa atcgaagctc ttggccagct
      121 cctgcagcag caccctcatc cgcacgccac tcagcagccc agacggattg gtcggcaggg
      181 cgccgcaggt gagcagcgac agccctcgca cattggtggg gcgaatcacg tcggtgaccg
      241 gccgtccaga atcggtgcgg ccttcggtcg ggttgaacgt gagcgactgg gatgcgtcgt
      301 tgccgttata ggatggagtc agaagctcca tcaaaccggg agaacggggt acctggaaca
      361 ggccgtgcag ccgaggacgc cgaacatcgc agtcgaccag cagcactcgg agaccatcgt
      421 aggcgaaagt cacggagagg ttcgccgagg tcagcgtctt accctcgcca ggcgcggcgc
      481 tggttacgac aagggtcttc atactgtcgc cctgctcgca ccagaccagg ctggtccgca
      541 acatccggaa cgcctcgacc ccaatcgaga atggctgggt gacggtgccg agtgccgagg
      601 cgtttgcacg cttgtccaac tcggcacgct tgcccggccg caataaacgg cggcctgcag
      661 ccggcgacgt tcccgaggag agccggggaa tcactgcgag tcccggcacg tgcagggcga
      721 cctcaaggtc ctccggcttc cggatcgagg tgttcaacgc ctccagcagg aatgccccgc
      781 ccacgccaag cagaagcccg agcaagagcc cgagtgcgag cttcagtggc gcagtttccc
      841 aaatggccgc atacggggta ccggcgagat cgacgatatc gaggtcaccg gcttcgactt
      901 cctcggccat gcgggccttc tggtagtctt tccgcacctc gtcgctggtc gaggtaagcg
      961 tctgaaccct gccggtgagc cgtgcctcct cttccgccat cgccggcagc aactgcagcg
     1021 cggagccctg ctgggtcctg agctttcgca gagccgcgat acgggaatcc agggtagaca
     1081 cgtgacttgc gaccgcctgc ctcagctgcg tcttggtcga ggccatctgg gccttgagct
     1141 gaatcagatc gggattggtc ggtgcggcgc gccagggccc ggtggtcatg gagtccacct
     1201 tgtactgatt gacctcaagc tggtggaaca agtcattgac cttggggttt tcagccattg
     1261 ccggcgaggc agccagggcc cgaagcgcct ccgactccgt tgaatctcca cccttcttga
     1321 gttgatccat cagtgaaccg aacgtttggc gatcggcttc cagctccacc cgacgctcgt
     1381 ccagggtcat catatcggtc tgctgccgat cgagcgctgc ctgggtgctc gccagctgtt
     1441 ggcggctgcg gaacgaagcg agctcggcct gtgcccgggc cagcatgctg tcggtctgct
     1501 tcagctgccc ctcgaggaac tggcgccggc gggtggacat ctgcttcgcg ttctcgatgc
     1561 tgaggtgctt gaacaccgtc actgtggtgt tgacgatgtt ctgcgccatc cgcgggttcg
     1621 gcgagatgta gctgacgtcg atgacgtcgg ttcccgcgcg gggaatgacc tgaaggttgt
     1681 tgaacagatt gtcggcggcc atctggcgcg gaatggtatg cagcgtcgcc gacggaatgt
     1741 cgggcaccgc gcgcaccgca aaccgcaccg atcccaggtc cagcacgtct ccgtagtggc
     1801 ctcgagcctc acggttccgc agctgagctt tgaccccatt ctgataaaaa gccacctgga
     1861 tcgtatcgtt cgccgtctgc ggattgaccc agactttgtc cagcttgccg atgccgaact
     1921 cgggagtgtc ggagttgagc tggagaccga gcgagtcgac gaccgcaccc agaacggaat
     1981 agctgcgcgc accttgggcc agcgacagga tcggatccat cgtccggggg gagatgttct
     2041 ccgagggctg gtcctcgaac tgttccgtta tggcgcgccg ctcattagcc aaacgtatgg
     2101 tagacattgc ccgatagctc gccggcgtct tggcggcgag aaaggcccca gcacccagcc
     2161 caagcagcgt caccaagacg atgagcttgt agcgtcggcg gatcactcgg aagagttggc
     2221 ccagcgacac ggcgtcacca gccggggccg agtgatcgta tccgccatcc ggatgcatgg
     2281 gaccggcagg aagctggcga ggttgcgggt agtattcggg catggtgcta ggggttcctt
     2341 tgggcgcgct cgatgaccag atagatagag gctatcgacc cgatgaccgt aaacgaaggc
     2401 agcaaaatat ctcgaaagaa cgatttgcgg cggtcaacca ctatctggtc gccggagtga
     2461 acccgggccg cggcagagga gccttgcgta tccaggagat tgatgaagaa ctcgtgctgt
     2521 cggccgttgt tgtccttccg gaggactctg acctgcttac gattcgcgaa ctgattgggg
     2581 ccgccggcct gagcaaccgc gtcggcaatg gaagtctcag ggcgtactgc aaagacctga
     2641 ggccggccca cctcgcccga gaccgccacg cgaaccagtg gctccatgac gaactgagga
     2701 tcctgttcga atcgagccag aaagttccga acgttggtct ccgcagtcgg gaacggaact
     2761 cctccgacgc gaacggcctg atacagcgga tgggtaatgg tgccatccgg cccgacaatg
     2821 aaatccccgc tcatctcggg cttgcgccac accaccaccc ggaccgaatc cccgggggac
     2881 agggtgacct ggtcagcagt cggcgcagcg ctctgggcaa ggaccgtcgt ggagatcaga
     2941 ggaaccgcaa tgaggagcag ggactgccgg agcaactttc gcatagcctc accgatgagc
     3001 gtttgtagga gcggcagcac aagtccaaca cgctccacac cctagaagac tgccgaatcg
     3061 cacgaagcat gccccgcgca ggggactcgg cgacctcgcc acatctcgtg ggctcaaaac
     3121 aatgtatccg aattgcttcg ggaattcagc aggacagcgg ccgcccgggt cgaagccccc
     3181 gatggcaggc agagccaaac ggttgaccaa tgaccctgga ggcggactgt tgcaggcccc
     3241 cgacagcaga tctgcggggg agccccacgc agggacagaa aagcaaacga ccggagggaa
     3301 ccctccggtc gtttagctct ctcaggaagg ttagcggctc ttacatgatt tggcaggcag
     3361 ctggcccaag gtgctag
//
LOCUS       DASRPQ010001092         1104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4203772, whole genome shotgun sequence.
ACCESSION   DASRPQ010001092 DASRPQ010000000
VERSION     DASRPQ010001092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4203772"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..380)
                     /locus_tag="VFD73_12425"
     CDS             complement(<1..380)
                     /locus_tag="VFD73_12425"
                     /inference="COORDINATES: protein motif:HMM:NF022629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein"
                     /protein_id="HZI74801.1"
                     /translation="MTSSSTSAQRAANVSAQDMVVGVFPSHPQAEEAVNRLIEAGIPA
                     IHISLVTQGLEMRERLQGFITTGDVARQGAGVGAWTGGLFGLLAGAAFLWAPALEPLI
                     VLGPLVSGALGAAEGGAVGGLLGA"
     gene            885..>1104
                     /locus_tag="VFD73_12430"
     CDS             885..>1104
                     /locus_tag="VFD73_12430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74802.1"
                     /translation="MLPCGAPYLDTTRPRLLRLREAQRQHAILERCVDVLGINGHGER
                     EGTREASRATFAQNHLFAASLLMFLAQLP"
BASE COUNT          172 a          372 c          347 g          213 t
ORIGIN      
        1 atcgctccga gcaagccacc cacggcccca ccctcggcgg ccccgagcgc tccgctgacg
       61 agtggaccca ggacgatcag cggctccagc gctggagccc ataagaatgc agcgcccgcc
      121 agcaggccga agaggcctcc agtccaggcc ccgaccccag cgccctgacg tgccacatcg
      181 cctgtggtga tgaatccctg cagtcgctcg cgcatttcca gtccttgcgt cacgagcgag
      241 atgtgaatgg ccgggattcc ggcctcgatc aatcgattga cagcctcctc ggcctgcgga
      301 tgcgacggga agactcccac gaccatgtcc tgcgcactga cgttggcggc acgttgcgcg
      361 ctcgtgctcg aggatgtcat cgcctgatcc tttcgttggc tgctagctcg ttcctctgac
      421 cgcaaacgac actcgggcgt tggcgtggcc gtctctaggg agacatgtgg ccgggaggac
      481 ttatgctgga cgacagccgc gtgaacgcga agttggtgcg cctggtgtga cgggcaggcg
      541 cctcagctct cgagaccgat gcgagatgaa ggatctcgat gcccaaccca gcaagcctgc
      601 atggtcatga tgagcgtatt gcggaactcc accgtgcgtc cctggccgtc ttgtcgatcg
      661 cccatcgtcc agcaactgga ccagcaagtt cagatgtggt tgatgtgcta ttgttgtcca
      721 gtccgggtcg ttccgccgct tgccgcctgg gctgcctggc tctgtcccga ctcctcggtc
      781 ggggccaggg atgtcgcaga gccctgagcc tgcgacgcgg cctggtcttg cccatcttgc
      841 cggctggggc tgggggtcgc ggcacgagta tccgtcagct tctcttgctg ccctgcggcg
      901 ctccgtacct ggatacgacg cggcctcgcc tgttgcgcct tcgggaggcg caacgtcagc
      961 acgccattct cgaaagatgc gtcgatgtgc tcggcatcaa cgggcacggg gagcgtgagg
     1021 gtacgcgcga agcctcccgt gcgacgttcg cgcagaatca cctgttcgcc gcgtcgctcc
     1081 tcatgttcct cgcgcagctc cccg
//
LOCUS       DASRPQ010001093         1088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_131700, whole genome shotgun sequence.
ACCESSION   DASRPQ010001093 DASRPQ010000000
VERSION     DASRPQ010001093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131700"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(33..368)
                     /locus_tag="VFD73_12435"
     CDS             complement(33..368)
                     /locus_tag="VFD73_12435"
                     /inference="COORDINATES: protein motif:HMM:NF024908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI74803.1"
                     /translation="MNDPKPSAYPQALARQRAQLIMQVRSGLLSAREAARQMQVSHKT
                     YYKWECRALAAMVEALGNREQGRPRQAIDLEKEALRSRTQELEAKLQVLEQTEQIRQR
                     LEEPDKKKA"
     gene            complement(399..740)
                     /locus_tag="VFD73_12440"
     CDS             complement(399..740)
                     /locus_tag="VFD73_12440"
                     /inference="COORDINATES: protein motif:HMM:NF024908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI74804.1"
                     /translation="MSPEIKAKKEALPYNAQQRVQAVLSIWSERRRTREVCRELGIHP
                     SALYAWERRALQAMFQALEPATRQDPGPALSPKLERLLQRQALQQKGRMAKLEKRLAK
                     LQEPKAPPPTK"
     gene            739..1038
                     /locus_tag="VFD73_12445"
     CDS             739..1038
                     /locus_tag="VFD73_12445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74805.1"
                     /translation="MRSSFQIVGDLLPRSRFFALNEHLHLALFGPDDHGLVAHPSHHV
                     ERRARLPSQGQFERVFFQAPLDDLAQVLGNGKEAISGTQPVQRLMGPLVVVVLHP"
BASE COUNT          161 a          381 c          311 g          235 t
ORIGIN      
        1 gagtgagaat cgtcaccacc atttcggcca cctcaggctt tttttttgtc aggctcctcc
       61 aaccgttgac ggatctgctc tgtctgctcc aggacttgga gcttcgcctc gagctcctga
      121 gtccggcttc ggagcgcttc cttctccaga tcgatcgctt gccgcgggcg cccctgttcg
      181 cgattcccca gcgcttccac catcgccgcc aaggcccggc actcccactt gtaataggtc
      241 ttgtgggaga cttgcatttg ccgggcggct tcccgggcgc tcaacaaccc gctccgcacc
      301 tgcataatca actgcgcccg ctgccgggcc agggcctgtg ggtaagcgct gggcttcggg
      361 tcgttcatcg ctcgatcctc ccgtccggcg gagatgacct atttggtcgg gggtggggcc
      421 ttcggttctt gcagcttggc cagccgcttc tccagcttgg ccatccgccc cttctgctgc
      481 aaggcttggc gctggagcaa ccgctccagt ttcgggctca aggccggtcc cggatcctgg
      541 cgcgtcgccg gctccagcgc ctggaacatc gcctgaagcg cccgcctctc ccacgcgtag
      601 agcgcgctgg gatggatccc cagctcccga cagacttccc gggtgcgacg gcgctcgctc
      661 cagatcgaca gcaccgcctg cacgcgctgc tgggcattgt aagggagcgc ttccttcttg
      721 gctttgattt cggggctcat gagatcctcc ttccagatcg taggtgacct cttgccgagg
      781 tcgcgcttct tcgccctcaa cgagcatctt cacttggccc ttttcggccc ggatgaccac
      841 ggactggtcg cccatccgtc ccaccatgta gaacggagag cgcggttgcc ctcgcaaggc
      901 cagttcgagc gcgttttctt ccaggccccg ctcgatgacc ttgcgcaagt cctgggcaat
      961 ggcaaagaag cgatcagcgg gacacaaccc gtccagcgac tgatggggcc gctggtggtt
     1021 gtagtgcttc acccataacc gcacccgctc gcgcgccgac tcgaaactgt caaactgggc
     1081 tcgcacca
//
LOCUS       DASRPQ010001094         2944 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_445758, whole genome shotgun sequence.
ACCESSION   DASRPQ010001094 DASRPQ010000000
VERSION     DASRPQ010001094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2944)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2944)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2944
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_445758"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1695)
                     /gene="kdpA"
                     /locus_tag="VFD73_12450"
     CDS             complement(<1..1695)
                     /gene="kdpA"
                     /locus_tag="VFD73_12450"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HZI74806.1"
                     /translation="MTGNGWLQIAVFATAVLLLTKPLGLYLVAVYEGRVRWLLPLERA
                     LYRAAGIDAEQDQHWTAYAASMLVFSLISMLLTYLVLRLQHLLPLNPEHMAGVTDRQS
                     FETAASFTTNTNWQSYSGEATMSYLSQMTQLAFHNFASAAVGIALAVALVRGIARRTG
                     GRLGNFWADLVRGTLYVLLPFSLLLALIFVHQGVIQNFKPYLHLTTLEGAKQTIAMGP
                     VASQEAIKQLGTNGGGFFNANAAHPFENPTPWSNFWSMLAIFAIPSALTYLLGRMVRN
                     QAHGWAVWAAMFALFLAGTTTAYWAEARGNPIHAARGVDVVASSTNPGGNMEGKEVRF
                     GIANSALYSVVTTDASCGAVNGMHDSFTPLGGMVPLLNIQLGEVIFGGVGAGLYGVLV
                     MVILTVFIAGLMVGRTPEYLGKKIQTREVQMAMLYVLIFPASILVLTAISSVVKPGLA
                     GLNNAGPHGLSEILYAFTSVTGNNGSAFAGLTGGTYYYNTLLGLATLVGRFAMIVPML
                     ALGGFLAEKQSTTETAGRFPVTTPLFVVLLLGVILIVGALTFFPALSLGPIVEHLLM"
     gene            complement(1697..1786)
                     /gene="kdpF"
                     /locus_tag="VFD73_12455"
     CDS             complement(1697..1786)
                     /gene="kdpF"
                     /locus_tag="VFD73_12455"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
                     /protein_id="HZI74807.1"
                     /translation="MSAEWLIAGVTAVGLLAYLLYSLLRPEHF"
     gene            2238..>2944
                     /gene="chrA"
                     /locus_tag="VFD73_12460"
     CDS             2238..>2944
                     /gene="chrA"
                     /locus_tag="VFD73_12460"
                     /inference="COORDINATES: protein motif:HMM:TIGR00937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate efflux transporter"
                     /protein_id="HZI74808.1"
                     /translation="MIESSAPPSRVALARYFLSLGAAGFGGPIALVGHMHRDLVEARG
                     WVSEDEYREGLALAQLSPGPLAAQLCFYLGYIRGGILGATLSGLGFVLPSFVIVVALG
                     WAYVRYGGLPWMQAVFYGVGAAVIGLITRSAYGLTRKTIGKDLLLWGVFLVVAVATAA
                     TGREIVWLILAAGALVWLVRAPPPALRRRGTLAEAGTALLLLQILGFFAYAGSFVFGS
                     GLAIVPFLHGGVVLEHQ"
BASE COUNT          563 a          912 c          927 g          542 t
ORIGIN      
        1 catcagtaga tgctcgacga tgggaccgag ggagagggcg gggaaaaagg tgagggcgcc
       61 cacgatcagg atcaccccca gcagcagaac cacgaagagc ggcgtggtca ccgggaacct
      121 tcccgccgtt tcggtggtag actgcttctc cgccaggaaa ccacccagcg ccagcatggg
      181 gacgatcatg gcaaagcgtc cgaccagcgt cgccagcccc agaagggtgt tgtagtagta
      241 ggtgccgccg gtcaaaccgg cgaaggcgct cccgttgttt ccggtgacgg aggtgaacgc
      301 gtacaggatc tcgctcagtc cgtgcggccc ggcgttgttg agcccggcca gtcccggctt
      361 caccaccgag gagatcgcgg tcagaaccag gatcgaggcc gggaagatca gcacgtacaa
      421 catcgccatc tgcacctcgc gggtctggat cttcttgccc agatactccg gagtgcgccc
      481 caccatcagt ccggcgatga agacggtgag aatgaccatc accagcacgc cgtagaggcc
      541 cgccccgacg ccgccgaaga tcacctctcc cagctggatg ttgagcagcg gcaccatccc
      601 tcccagggga gtaaaggagt cgtgcattcc gttcaccgct ccacaggaag catcggtggt
      661 caccaccgaa tacaaggcgg agttggcgat gccgaagcga acttcctttc cctccatgtt
      721 gccaccggga ttggtggacg acgccactac atcgacgccc cgagcggcat ggatcggatt
      781 gccccgggct tcggcccagt acgcggtggt cgtgccggcc agaaagagcg cgaacatcgc
      841 agcccagacc gcccagccgt gagcctggtt ccggaccatg cgacccagca gataggtgag
      901 cgcggaaggg atcgcgaaga tcgccagcat cgaccagaag ttcgaccagg gggtcgggtt
      961 ctcgaaggga tgggcggcgt tggcattgaa gaagccgcca ccgttggtcc ccagttgttt
     1021 gatggcctcc tggctggcga ccggccccat ggcaatagtc tgcttcgcgc cttccagcgt
     1081 cgtcagatgg agatagggct tgaaattctg gatcacgccc tggtgcacaa agatcagggc
     1141 cagcaatagg gagaagggca gcaggacata gagcgttccc cgcaccagat cggcccagaa
     1201 gttccccagc cttcctccgg tgcgtcgggc aatgccgcgt accagggcga cggcgagcgc
     1261 gatgccgacg gctgcggagg caaagttgtg gaaggccagc tgggtcatct gggacaggta
     1321 cgacatcgtc gcttcgccag agtacgactg ccagttggta ttcgtggtaa acgacgccgc
     1381 cgtctcgaac gactgccgat cggtcacccc tgccatgtgc tcgggattga gcggcagcag
     1441 atgttgcagc cggagcacca ggtaggtcag aagcatggag atcaggctga agaccagcat
     1501 cgaagcggcg taggccgtcc agtgctggtc ctgctcggcg tcgattccag ccgcgcgata
     1561 gagggcacgc tcgagtggca ggagccagcg cacccggccc tcgtacaccg ccaccaggta
     1621 caggcccagc ggcttcgtca acagcaacac ggcggtagcg aaaaccgcta tctggagcca
     1681 cccgttaccg gtcatctcag aagtgctcgg gccggagcag gctatatagg agataggcga
     1741 ggagtcccac tgcagtgacc cccgcgatca gccactcagc ggacatcgga atttcttccg
     1801 cttcgcgcgc ccagcttctc gcaggcgcgg acgtaggcca acattgccac gaagctgccg
     1861 atagtcagga gcacgtagag aaagtcgagc atctggtcgc caccgtgaga atgtaggtgg
     1921 tgaatgttag agcagacggt ataaagatgg agtaaggagt cgggccggcg tcgttaagaa
     1981 gtcgtaaaga tgtgcagtcc agctaaaaac tgaatttgcg tcccgatcct tcacttccga
     2041 agcagtggat ctgattcagc acgccaagcg gagcggcagg tctgacggag atcccgtcac
     2101 tactacaacc cttcgacttc gcatcgcgcc tacctctgtt gaatccaacc ttctctctgc
     2161 taggttatgt aatcgccggt tacattgcga aaccagggca tctgttgtca gcctccccgc
     2221 tcccattcga gtcatcgatg atcgagagca gtgctccgcc gtctcgcgtc gcactggccc
     2281 ggtatttcct gtccctcggg gccgccggtt tcggaggtcc gatcgcgctg gttggccaca
     2341 tgcatcgcga tctggtcgag gcgcgtggct gggtaagtga ggatgaatac cgcgaggggc
     2401 tcgcgctggc ccaattgtct cccgggccgc tcgccgccca gctttgcttc tacctcggct
     2461 acatccgcgg tgggatcctc ggcgcgacgc tctccggact gggctttgtc ctgccaagct
     2521 tcgtgatcgt ggtggcactg gggtgggcct atgttcggta cggcgggctt ccctggatgc
     2581 aggcggtgtt ctacggtgtg ggcgccgccg tcattggcct catcacccgc agcgcctatg
     2641 gtttgactcg caagacgatc ggcaaggatc tcctgctctg gggagtcttt ttggtcgtcg
     2701 ccgttgccac cgcggccacc ggccgcgaga tcgtctggct gatccttgcc gccggcgctc
     2761 ttgtctggct cgtgcgggcg cctcccccag cactccgacg cagaggtaca ctggccgaag
     2821 ctggaaccgc cttgctgttg ctccagatcc tcggattctt cgcctatgcc ggaagtttcg
     2881 tcttcggcag cggcctcgcg atcgtaccct tcctccacgg cggcgtggtg ctcgagcacc
     2941 agtg
//
LOCUS       DASRPQ010001095         1123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2324187, whole genome shotgun sequence.
ACCESSION   DASRPQ010001095 DASRPQ010000000
VERSION     DASRPQ010001095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2324187"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1123)
                     /locus_tag="VFD73_12465"
     CDS             complement(<1..>1123)
                     /locus_tag="VFD73_12465"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HZI74809.1"
                     /translation="YRWQHEQPHVRNPSFWLSHLFQSLYSLLTRTGADLASRAPAVVA
                     RLEAAPGFLDAGRATIESPASVFVDTALSMLGGGGELIAQVVAVFGQTAPDLREQLQQ
                     SGEAALKALVGFGAALRHDIEPNPNPTAFAVGEAQFTRTLQHEHALSAGPAELWRYGL
                     RLQEEVTGQIVELAGRLSSKPWRQLVEELREDSPEPGDLLGVYRSEVERAQSFLSEHQ
                     LVDLPDGPVEVVPTPTYLRTLVPFAAYSPPPVYLPDRTGRFYVTAPDPALPREVTAEQ
                     RKAHARFGIPVLVAHEVYPGHHLQLLTMEDLGSEVRRHLWSPLMVEGWALYAERLMQE
                     AGYYQSDETHLFQLVTLLWRAIRVVLDVGLHVRGMTPAEA"
BASE COUNT          206 a          372 c          367 g          178 t
ORIGIN      
        1 gcttcggcgg gagtcatccc gcggacgtgg agcccgacgt cgagtaccac ccggatggcc
       61 ctccagagca gggtgacgag ctgaaacaaa tgggtctcgt cgctctgata gtacccggcc
      121 tcctgcatca gtcgctcggc atagagcgcc caaccttcca ccatgagcgg gctccacagg
      181 tgccggcgga cctcggaccc caggtcctcc atcgtgagca gctgaaggtg gtgaccgggg
      241 tagacctcgt gtgccaccag caccggaatg ccgaagcgag catgcgcctt ccgctgctcg
      301 gcggtaacct cccggggcag cgccggatcg ggagcggtta cgtagaagcg cccggtgcga
      361 tcaggcaggt ataccggagg cggcgaatag gccgcgaacg ggaccagggt cctcagatac
      421 gtaggcgtgg gcacgacctc gaccgggcca tccggcaggt cgaccagctg gtgttcgctc
      481 aggaagcttt gagcgcgctc gacttccgat cggtagaccc cgagcagatc accaggctca
      541 ggcgaatcct ctcggagctc ctccaccagt tgacgccacg gcttcgagct caggcggccg
      601 gcaagttcga cgatttgtcc agtgacttcc tcctgcagcc gtaacccgta gcgccacaac
      661 tccgccggcc cggccgacaa cgcatgctca tgctgcagtg tccgggtgaa ctgcgcctcg
      721 cccacagcaa aggcggttgg gttcggattg ggctcgatgt cgtgccgtag ggcggcaccg
      781 aatccaacca gcgccttgag cgctgcttcg cccgactgct gaagctgctc cctcagatcg
      841 ggggcggtct ggccaaagac cgcgaccacc tgagcgatca gttccccgcc gcctccgagc
      901 atgctgaggg ccgtatcaac gaacaccgat gccgggcttt cgatcgtcgc cctgccggcg
      961 tccaggaacc cgggcgcggc ctccaaccgg gccaccactg ccggggcgcg gctcgcgaga
     1021 tcagcgcccg tgcgggtcag aagggaatag agggattgga acaggtgaga cagccagaag
     1081 gaaggattcc tgacgtgcgg ctgctcgtgt tgccatcggt aca
//
LOCUS       DASRPQ010001096         1738 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4530835, whole genome shotgun sequence.
ACCESSION   DASRPQ010001096 DASRPQ010000000
VERSION     DASRPQ010001096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4530835"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(154..744)
                     /locus_tag="VFD73_12470"
                     /pseudo
     CDS             complement(154..744)
                     /locus_tag="VFD73_12470"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            complement(741..1037)
                     /locus_tag="VFD73_12475"
     CDS             complement(741..1037)
                     /locus_tag="VFD73_12475"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI74810.1"
                     /translation="MAHRRSRRRFTREYKAQSVQRLIESGRPLADIAAELDVSPGQLS
                     QWRHEQLAAGSAEALAARKAEQAETQRLRREVKRLEEEVEILRKAAAFFARGIA"
BASE COUNT          322 a          567 c          584 g          265 t
ORIGIN      
        1 ccgaggatct cgccgctgtg gcgatcgccc tcaacagcag gccgcgaaag actctgggct
       61 ggagaacacc ggccgaggct ctggaccagt tcctccaaac aactcacata ggccgtgttg
      121 cgacgaccac ttgaatccac cttgcacgcc gcggtccgaa tgatgaagga gcccgcgtgg
      181 cggtcggcag cgctggagag ccatgaccag ggcgtcgata cacaagccgg tcttgaggtg
      241 atccgccatc gaccagccca cgatctcgcg cgtggccagg tccttgaggg ccgccaggta
      301 gagaaagccc tcatcggttg gaatgtagga gatgtcggct aaccacacgg tgtcggggcg
      361 ctcggccaca aaggagcggc cgagcacgtt cggcgccacc gggagatcat ggcggctgtc
      421 cgtggtttcg ggcttacgcc gctggccacg gcgagcttgc aggcccatgt cgcgcatcag
      481 ccgctcgatc cggcgtcgcg catggcggtg cccctcgcgg cgcagttcag cgtggatgcg
      541 gggcgcgcca tagacccggc gcttggccgc aaagatgcgg ctgatatgcc cgcgcagcgc
      601 ggcgtccgcc tccgcgcggt tctgtcggga cgggatcgcg cgcagccagg cgtaaaagcc
      661 agagacgctt gcaccgacga cccggcacag cgtcgcaacg gcatggttgg cgcgctcagc
      721 tgccacaaag gcgaacgtgg tcacgcgatc ccccgagcga aaaaagcagc agctttcctg
      781 aggatctcga cttcctcttc gagccgtttg acctcacgcc ggagccgctg ggtctcggcc
      841 tgctcggctt tgcgagcggc cagcgcctcg gccgagccag cagccagctg ttcatggcgc
      901 cactggctca gctgccccgg gctgacatcc agttcagcgg cgatatcggc cagcggcctg
      961 ccactctcga tcaagcgctg aaccgattgg gccttatact cccgcgtaaa tcgtctccgg
     1021 gatcgtctgt gtgccatttc gccctcctgg ggtgctcggg ttctttacag aaccctccac
     1081 tccgcggggg gaagcccaac tccacgcccc tcagcccacc atagagccga ccgaagccgg
     1141 ggcccgaccc gatcgggtct ggtgcagcga ggctagctgc cattcctgcg ggtgaaagtc
     1201 ccgccaacag aggagtccag tcgctgttgt agtcatatcc agcgacggga agggtgactg
     1261 acccgtcgaa agcctggaac taaaagcccc cgttggctgg gagaccggtc agatccgtac
     1321 aggggggcca gcaaccggac aggccgtagc agtcgcgaac cagcgtagcc gcgaaaaccg
     1381 tgccccgcgt gaaacggatt gcgggagtgt tgggagtgcc gagccgctca gatctcggcg
     1441 aaggccgcgt cggcatcgcg caactggaca catgcgatgt gcgaactccc cggggtcaga
     1501 gaggacggca tgtcaggacg gaatggtagt gaaagcccgg aaccactcgc gggtcgcctc
     1561 ggcgctcccg cacagcgaag gcatcgcgta taagccgccc tgcggtgaag tcgcgatgtg
     1621 cctgcgagtg gggcggatgg ggccggttaa gcgaggacgg accgggacag cagaacccgg
     1681 acccgagcga gggcccctgg ggcggagggc gacccaccct ccaaggcggt gcatcggc
//
LOCUS       DASRPQ010001097         1488 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1706499, whole genome shotgun sequence.
ACCESSION   DASRPQ010001097 DASRPQ010000000
VERSION     DASRPQ010001097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1488
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1706499"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..665)
                     /locus_tag="VFD73_12480"
     CDS             complement(<1..665)
                     /locus_tag="VFD73_12480"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZI74811.1"
                     /translation="MADRVHLQRTVSCAGPAGADDPVTIQLQVPVLELTWDTRTESVN
                     RVTTSETASAQFVQAADETAYHIAIDDAFLTGSGRRLATQFLRDDLDTFNPLIGARDS
                     VEMSGRLLALGRAQTRWDAADGPKDLLTNTIFKLSPNVTPADTTVIPDAPRCKGRELA
                     RRRGLRQVPPQGLPMMGLVRIDRLDHLVLTVADIDATVEFYTRVLGMEAVTFGTGRIA
                     LAFG"
BASE COUNT          273 a          473 c          473 g          269 t
ORIGIN      
        1 ccgaaggcga gcgcgatgcg cccggtgccg aacgtcaccg cctccatgcc caggacacgg
       61 gtgtagaact ccacggtcgc gtcgatgtca gcgacggtca gcaccagatg gtcgaggcgg
      121 tcgatgcgca cgagacccat cataggaagg ccctgtggag gtacctggcg aagtccccgt
      181 cgccgagcca gttctcgccc cttacaccgg ggggcgtccg gtatcaccgt ggtgtcggct
      241 ggtgtcacgt tcgggctgag cttgaagatg gtgttggtca acaggtcttt cggcccatcc
      301 gcggcgtccc acctcgtctg cgcgcgcccc agggcgagca gacggccact catctccact
      361 gagtcacgtg ccccgatcag ggggttgaac gtgtcgagat cgtcgcggag gaactgggta
      421 gccaggcggc ggccgctgcc ggtgaggaac gcgtcgtcga tcgcgatgtg gtacgcggtt
      481 tcgtcggcgg cctggacgaa ctgggcggag gcggtctccg atgtggtgac tcggttcacc
      541 gactccgtac gcgtatccca ggtgagctcc aggaccggga cctgaagctg gatagtgacc
      601 gggtcgtccg ccccggccgg gcctgcgcaa gaaacagttc gctgaagatg gacgcgatcg
      661 gccatggact tccggacctc ccctggtcac cgcgatggga gcgccggcag gcaaattggt
      721 gcgggcgttt ccattcggag cccacggcag cactcgcccg gccgccggtg ccgcctgggc
      781 gccaagttgc cacagcagcc agtcccgctg agcctcccgg taggccgtat tgagcgcggg
      841 gtcccttgcc agcagccggc gtagcagttc acttggcgtt gcccagccaa ggaagcagcg
      901 aggctgctcg ggcgtcgcac cggtgaaaat tactgccttg ggaaaagtca gcctgacccc
      961 gccggacacg agcaccagca atcgggtgtc ccaccattcg tcgccttctt ttagatcggc
     1021 aacgacactg tgattgccta ccgcgttttt aagcgagtcg atgatagtgt cgctgcccgt
     1081 atccatcact gatccggggg gatttcctag gttgtcagcg atcaggcttc gggcggtaac
     1141 cacgccgtga gtgctcacca cgtcttgcac tgctgcgaat gcgaccgtca caccggcggc
     1201 ctggacagac ctaatgccgc cgaggataac cagtacaacc ggcagtaggc ctagcaagac
     1261 ggcaaccagc agcgggggga acgttagctt ggtcgccaat ggcccttccg gtctgtacag
     1321 ccacaccgcg accgcaacca gggccggcac catgatcagg ctggcgatga aggcccagcg
     1381 gacgccgaac ggccaatagc ggcttttaat catatttagg ctctactccg ctgtcacagt
     1441 tttagcaatc atctccatgc aatctccatg caatctccat atggtcac
//
LOCUS       DASRPQ010001098         1292 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4203958, whole genome shotgun sequence.
ACCESSION   DASRPQ010001098 DASRPQ010000000
VERSION     DASRPQ010001098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4203958"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..297)
                     /locus_tag="VFD73_12485"
     CDS             complement(<1..297)
                     /locus_tag="VFD73_12485"
                     /inference="COORDINATES: protein motif:HMM:TIGR03941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine deaminase-associated protein"
                     /protein_id="HZI74812.1"
                     /translation="MTDVNGGNVAVIVYREDDTWDTEILPVALTEDLQGLIHALRQQP
                     SIGGTIGLVAVGDDFFVALRLLGGQVSVFLSDLTAAVDWPLARQVLDYLDIPVPG"
     gene            641..796
                     /locus_tag="VFD73_12490"
     CDS             641..796
                     /locus_tag="VFD73_12490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74813.1"
                     /translation="MKLKQVVTWAIVLFLAFYLVTQPAAAGHVVSNILSGLKSAGNSI
                     ATFLNSI"
     gene            804..>1292
                     /locus_tag="VFD73_12495"
     CDS             804..>1292
                     /locus_tag="VFD73_12495"
                     /inference="COORDINATES: protein motif:HMM:NF015648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HZI74814.1"
                     /translation="MRLIAPRNAGPASVNKYLLPHEHQVITVRKHPAVLLTPIALALA
                     GVLAALVLGTTVFSGSRSAIIVLVLGAVVLLLNLAFKIWEWSEDYFAVTSDRMLEASG
                     VFTRKIAMMPLVKVTDMSFRRSTMGRLLGYGEFILESAGQDQALRNIDHVPYPEQLYL
                     EIC"
BASE COUNT          234 a          412 c          411 g          235 t
ORIGIN      
        1 gccggggacc gggatgtcca ggtagtccag gacctggcgg gccagcggcc agtccaccgc
       61 ggcggtcagg tcggacagga acaccgacac ctggccaccg agcagccgga gcgcgacgaa
      121 gaagtcgtcg cccaccgcga ccaggccgat ggtgcccccg atgctgggct gctggcgcag
      181 cgcgtggatc agcccctgca ggtcctcggt gagggcgacg ggcaggatct cggtgtccca
      241 cgtgtcatcc tcccggtaga cgatcacggc gacgttgccg ccattcacat ccgtcatcgc
      301 cacctcacca gggctgtctc cagcaaggaa tggtgtcaga tcggcagcac acccgggggc
      361 caatctccgg cctcgttgcg gccccggggt gggaccgggg ccggagcggg catttcgcta
      421 ccccaggcat ctagatgtgt acctatcgtg actaaaaaga cccgaaggtt ttcgctgtga
      481 gcgagaaggt ccgtgatttc cactccccat cggcgcgtga cgtgcccggt tcctggggat
      541 caaggtacgg tggacgcttg ccgacctgag cattggttaa gagattacgc tgggctaagc
      601 tgagctaaca gagtggcgta tacgcgactg ggagttgacc atgaagctca agcaggtcgt
      661 tacttgggcg atcgttctct tcttggcgtt ctacctggta acccagccgg ccgcggcagg
      721 acatgtggtg tcgaacatcc tcagtgggct caagtcggca ggcaactcga tcgctacttt
      781 cctgaactcc atctgagccg gcgatgaggc tgatcgcacc gcgcaacgcg gggcccgcct
      841 cggtcaataa gtacctcctg ccacacgagc accaggtcat caccgtccgc aagcacccag
      901 ccgtgctgct gaccccgatc gcgctggccc tggccggggt gctggccgca ctcgtgctgg
      961 gcaccaccgt gttcagcggc tccaggtcgg ccatcatcgt gctggtgctc ggggccgtcg
     1021 ttctgctact caacctggcc ttcaagatct gggagtggtc agaggactac ttcgcggtga
     1081 cgtcggaccg gatgctggag gccagcggcg tcttcacccg caagatcgcg atgatgccgc
     1141 tggtcaaagt caccgatatg agcttccggc gctcgaccat gggccgcctc ctcggatatg
     1201 gcgagttcat cctggaatcg gccggccagg accaggcact gcggaacatt gatcacgtac
     1261 cgtacccaga gcagctctac ctggaaatat gc
//
LOCUS       DASRPQ010001099         1001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2657832, whole genome shotgun sequence.
ACCESSION   DASRPQ010001099 DASRPQ010000000
VERSION     DASRPQ010001099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2657832"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..377)
                     /locus_tag="VFD73_12500"
     CDS             complement(<1..377)
                     /locus_tag="VFD73_12500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74815.1"
                     /translation="MIIDPETKLIVSLVVGRRNADTVVQVFTDFYGRTDGYLPELICT
                     DGYRVYEAVILDTYGVYWRQEMGLTPEELADFERCGMPEFYFPVEVTYATVHKEREKG
                     RVVKVTEQLILGSEEQLEQALAES"
     gene            complement(424..843)
                     /locus_tag="VFD73_12505"
     CDS             complement(424..843)
                     /locus_tag="VFD73_12505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1-like element transposase"
                     /protein_id="HZI74816.1"
                     /translation="MSAADYAHLACPNPDCPAYGQRGAGNLRLHGWSGRGHRIRCLHC
                     ATCGCDFSERANTPLFGLRTAEDTLASLAAHLADGCGCRATARLCKVSLNTVLRFAQR
                     FGQHAEAFHDSRVRGIQPKQIQPDEAWAFVGKKRQAV"
BASE COUNT          172 a          337 c          313 g          179 t
ORIGIN      
        1 gactccgcca gcgcctgctc cagctgctcc tcgctcccca gaatcagttg ctccgtcacc
       61 ttcaccacgc gccccttttc ccgctccttg tggacggtgg cgtaggtgac ctccaccggg
      121 aagtagaact ccggcatccc acagcgctcg aagtcggcca actcctcggg ggtcagtccc
      181 atctcctgcc gccagtacac cccgtaggtg tccaggatca ccgcctcgta caccctatac
      241 ccgtccgtgc aaatgagttc cggcaaatac ccgtccgtgc ggccgtagaa gtccgtgaag
      301 acctgaacca cggtatcggc gttgcggcgg cccaccacca ggctgacgat cagcttcgtt
      361 tccgggtcga tgatcacatg gtcccagtag ctaccccgtt cggcatcgct ggggtcgtcc
      421 ggattacacc gcttgtcttt ttttccccac aaaggcccag gcctcgtcgg gttggatctg
      481 cttgggctgg atgccgcgca cccggctgtc gtggaacgcc tcggcgtgct ggccaaagcg
      541 ttgcgcgaag cgcaggacgg tgttgaggct gaccttacag agccgcgccg tagcgcggca
      601 gccacagcca tcggcgaggt gcgcggcgag agaggccagg gtgtcctccg cagtgcgcag
      661 gccgaacagg ggcgtgttgg cgcgttcgga gaagtcacag ccgcaggtgg cgcagtgcaa
      721 acagcggatc cggtggccgc ggccggacca gccgtgcaag cgcaggttgc cggcaccgcg
      781 ctggccgtaa gcggggcagt cggggttagg gcaggccagg tgcgcgtagt cagcggcgct
      841 catcgcttcc ctcccttctg accgggctgc tatcacctta tgcagccccg gacctgtcgc
      901 gaagccctac ggagtcacca ccgacgaatt caagcggcaa gcaatgtctg aactcgtgag
      961 ggctcaaggg cttggggaca ctccgagagc ccagtcaaat t
//
LOCUS       DASRPQ010001100         1693 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3281720, whole genome shotgun sequence.
ACCESSION   DASRPQ010001100 DASRPQ010000000
VERSION     DASRPQ010001100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1693
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3281720"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..942
                     /locus_tag="VFD73_12510"
     CDS             <1..942
                     /locus_tag="VFD73_12510"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HZI74817.1"
                     /translation="RAGLRPSSATAPGGAHASRYSSELYYAPLSLFTSAGCEHPMLRK
                     ASQTLATLDCERRRLYRSSISSRKSTMSAITASPITARQVSVDARPGPLVIAPRHTAV
                     LVVDAQNDFAAEGGMFHRAGLDISPIQATIKPISRVLEAARKDGLKVVYLKMAFRPDL
                     SDAGPPGTPNRDRHSFFGVGQAVQTPDGTPTRVLIRDEWGTQVLPDLAPEPGDVQIYK
                     HRFSGFYQTELDTVLKQQGIRYLIATGCTTSVCVESTVRDAMFRDYSCLVLEDCCAEP
                     IGSQFSRSNHEASLLVLQLLFGWVSPSSAFIQALSAV"
     gene            1099..>1693
                     /locus_tag="VFD73_12515"
     CDS             1099..>1693
                     /locus_tag="VFD73_12515"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI74818.1"
                     /translation="MTAVPAETGAAGRRPQLLGLVRQVFREQYQIDREVARGGDARLF
                     LAYDRGGRRIALKILHPEFLESVAAERFVREIRLVSQLNHPRIARLQDAGEREWLVFI
                     AMDFIDGPTLREILGGGRRLSISDTLRLSSHLLEALEHAHQLGIVHRDVKPENVIISP
                     ERGAVLLDFGIARAIMTSVSKEITRAGMTVGSSSYMSP"
BASE COUNT          294 a          579 c          505 g          315 t
ORIGIN      
        1 cgcgccgggc tccgaccgtc gagtgccaca gcgcccggag gagcccacgc cagtcgctac
       61 tcttccgaac tctattatgc acctctgagc ctattcacca gcgccggatg cgagcatccg
      121 atgttgcgga aagcatccca gacgttggct actctggact gcgaacggcg gcggctgtac
      181 cgtagcagca tctcatccag gaaatcgacc atgtccgcaa tcactgcgtc gcccatcacc
      241 gcccgccagg tatcggtcga cgccagaccc ggccctctgg tgatcgcccc ccggcacacc
      301 gcagtgctcg tcgtcgatgc ccagaacgac tttgccgccg aaggcggaat gtttcaccgc
      361 gccggcctcg acatctctcc gatccaagcc acgatcaagc caatcagccg cgttctcgaa
      421 gccgcccgca aggatggtct caaggtcgtt tatctcaaga tggcgttccg gcccgacctc
      481 tcggatgcgg ggccgccggg aacgcccaat cgtgaccgcc acagcttctt cggcgtgggg
      541 caagcggtgc agactccgga tggcacaccg acgcgagtgc tgatccgcga tgaatgggga
      601 actcaagtgc tccccgatct cgcgccggag ccgggcgacg tgcagatcta caagcaccgg
      661 ttcagcggct tctaccagac cgagctcgat acggtgctga agcaacaggg catccggtat
      721 ttgatagcca ccggctgcac caccagcgtg tgtgtggaat ccaccgttcg cgacgccatg
      781 ttccgggatt attcctgtct cgtgctggag gattgctgcg ccgagccgat cggatctcag
      841 ttctcccgca gcaaccacga agcttctctg ctggtgcttc aacttctgtt cggatgggtg
      901 tcgccctcga gcgcgttcat ccaggcactc tcggccgtgt aggctcagat actgtccttg
      961 gctcatccgc ctctcccgcc atttccgcca ttgtccgccc ttttcacgct cccttcacgc
     1021 tgcccgcgca gattgcccag gactttttga tccgaaggca tccatgactt tctcgcccgc
     1081 ctgggccggg ggcttccgat gacagcagta ccggcagaaa caggagcagc aggccgccgg
     1141 ccccagctac tggggttggt acgccaggtg ttccgcgagc aataccagat cgatcgcgag
     1201 gtcgcacggg gcggcgatgc ccggctgttt ctcgcctacg atcgtggcgg cagaaggatc
     1261 gcgctcaaga tcctccaccc cgagttcctc gagagcgtcg ccgcggagcg gttcgtccgc
     1321 gagatccggc tcgtctccca actgaaccat ccccggatcg cgcggctgca ggacgcgggt
     1381 gagcgagagt ggctggtctt tatcgcgatg gacttcatcg acggaccgac gctccgtgag
     1441 atcctgggcg gaggtcgccg gctcagcatt tccgacacgc tccggctgtc ctcccacctg
     1501 ctcgaggcgc tggaacacgc gcatcagctc ggcatcgtcc accgggacgt caagccggag
     1561 aacgtgatca tctcgccgga gcggggcgcg gtgctgctcg acttcgggat cgcccgcgcg
     1621 atcatgacct cggtcagcaa ggagatcacc cgggccggga tgacggtggg cagctccagt
     1681 tacatgagcc cgg
//
LOCUS       DASRPQ010001101         2164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2951098, whole genome shotgun sequence.
ACCESSION   DASRPQ010001101 DASRPQ010000000
VERSION     DASRPQ010001101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2951098"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1803
                     /locus_tag="VFD73_12520"
     CDS             <1..1803
                     /locus_tag="VFD73_12520"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HZI74819.1"
                     /translation="LSFNYSLGADYSNDERTQGWPWSNSNTTIAGVNGVGGVNAGYIK
                     TFQVDHNLTATAHYKVSPVWSGAVTVGQNLNSNKYQSRQTLGTGLIAPQPFNLANTSA
                     QLPPYDYQQTIRLESYFAQVSADLFDQLFLTAAVRNDGASTFGATTRHNWYPKASAAW
                     TFFRSAEGTNRFLTFGKLRAAYGQSGTQPAPYLLSSVLLGGWAGTDGGWGPAGSTQQN
                     GLGGLISSYILPTKDLGPERVKEFETGFDLGLWQDKADLGFTWYRDLSTDVILNLPVA
                     GSTGYTQKPANAASLRNAGIEVALNVRPITTKNFAWDLGFQVATNRSRVLDLAGVQFV
                     PFPISGGNNGLTGIQAVAIKGQPLGVYYGTDFIRCGRGLSYAGYDLDHTPGQCEGAPA
                     GALYIDSTGYPQPDVAGNYVIGNPNPDWTGSVRTSFRVNKFSIGGLLDIRQGGVASNQ
                     TQGALDHFGTSKKSQVMRDGGNFVFGNSYFGNETVAGPGAGMPVPIGESWFTGSGGIF
                     NGPKSQFNEDASFVKLREISLGYTFDQPWVSRLLGFSSMELRVAGRNLHTWTNYTGVD
                     PETSLLGSASPARGFDYFNSPQTRSYVFSLTLNR"
     gene            1822..>2164
                     /locus_tag="VFD73_12525"
     CDS             1822..>2164
                     /locus_tag="VFD73_12525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74820.1"
                     /translation="MRHSFRFMLSAALAISAAGCGDYLSGPGVDQDPNNITKLTRPGP
                     LYIGIQALQSVQFEGQIARNAAEYVQQVAGISRQQIGYDLYGMDPSTIDPEFYSVYGS
                     SSVIQGGGGLLD"
BASE COUNT          409 a          715 c          650 g          390 t
ORIGIN      
        1 ctctccttca actacagtct gggcgccgac tattccaacg acgagcggac ccaaggctgg
       61 ccctggtcga attccaacac caccatcgcc ggcgtcaatg gagtaggtgg ggtcaacgcc
      121 ggctacatca agacattcca ggtcgaccac aacctcactg ccaccgccca ctacaaggtg
      181 agtccggtct ggagtggagc ggtgaccgtg ggccagaatc tcaattccaa taagtaccag
      241 agccggcaga cgctgggaac cgggctcatt gctccccagc ctttcaacct ggccaacacg
      301 tcggcgcagc tgccgcctta tgactatcag cagacgatcc ggctggagtc ctatttcgcg
      361 caggtcagcg ccgatctctt cgatcaactg ttcctcaccg cggccgttcg gaacgacggc
      421 gcctcgacgt tcggcgcaac cacgcgccac aactggtatc ccaaggccag cgcggcctgg
      481 accttcttcc ggagcgccga gggaaccaac cgattcctca ccttcggaaa gctgcgcgcc
      541 gcctacgggc agagcggcac ccagccggca ccttacctgc tttccagcgt gctgctcggt
      601 ggctgggccg gcactgacgg aggctggggg ccggctggtt cgacccagca gaacggcctg
      661 ggtggtctca tctccagtta catcctgccg accaaggacc ttggtcctga gcgggtgaag
      721 gagttcgaga ccgggttcga tctcggcctc tggcaggaca aggccgatct cgggttcacc
      781 tggtatcgtg atctctcgac cgacgtcatt ctcaacctgc cggtggccgg aagcaccggc
      841 tacacccaga agccggcgaa cgcggccagc ctgcgcaacg ccggcatcga agtggccctc
      901 aacgtccggc cgatcaccac caagaatttt gcctgggatc tcggcttcca ggtcgctacc
      961 aaccggagcc gagtgctcga tctggcggga gtgcagttcg ttcccttccc gatcagcggc
     1021 gggaacaacg gcctcaccgg cattcaggcg gtcgccatca aggggcagcc gcttggggtg
     1081 tactacggca ctgatttcat ccgttgcgga cgcggtctca gctacgccgg atacgatctg
     1141 gatcacactc cggggcagtg cgaaggcgcg ccggccggtg cgctgtacat cgactccacc
     1201 ggctaccccc agcccgatgt cgcaggcaac tacgtcattg gaaatcccaa tcccgattgg
     1261 accggctcgg tccgaacctc cttccgggtc aacaagttct ccatcggcgg actgctcgac
     1321 atccggcagg gcggcgtggc gagcaatcag acccagggtg cactcgatca cttcggcacc
     1381 tcgaagaagt cgcaggtgat gcgcgacggt gggaacttcg tcttcgggaa cagctacttc
     1441 ggcaatgaga cggtggctgg tcccggcgcc ggcatgccag tgccgatcgg cgagtcatgg
     1501 ttcactggga gcggtggcat cttcaacggt cccaagtcgc agttcaacga ggacgcgagc
     1561 ttcgtcaagc tccgcgagat ctcgctgggc tacaccttcg accagccgtg ggtgagccgt
     1621 ctgcttgggt tcagcagcat ggagctgcgg gttgccgggc ggaatctgca cacctggacc
     1681 aactacaccg gtgtggaccc ggagacgtcc ctcctcggat cggccagtcc ggcgcgcggg
     1741 ttcgactact tcaacagccc gcagacccgg tcgtacgtct tttcgctcac cctcaaccgc
     1801 tagcgccaga gggaaccagt catgagacac tcattcagat tcatgctgag tgccgccctc
     1861 gccatcagcg cagcggggtg cggcgactac ctctcgggtc cgggtgtgga tcaggatccg
     1921 aacaacatca ccaagctcac ccgcccggga ccgctgtaca tcgggatcca ggctctccag
     1981 tcggtgcagt tcgagggaca aatcgcgcgt aatgcggccg aatacgtcca gcaggtcgcc
     2041 ggcatcagcc ggcagcagat cggatacgat ctgtatggga tggatccctc gaccatcgat
     2101 cccgagttct actcggtgta cggctcgtcc agcgtcattc agggcggcgg cggcctattg
     2161 gata
//
LOCUS       DASRPQ010001102         4839 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2951112, whole genome shotgun sequence.
ACCESSION   DASRPQ010001102 DASRPQ010000000
VERSION     DASRPQ010001102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4839
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2951112"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1135
                     /locus_tag="VFD73_12530"
     CDS             <1..1135
                     /locus_tag="VFD73_12530"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HZI74821.1"
                     /translation="EGQKAIEILTGAATPILDRWFESEQLKVTLATDAIIGAMASPSM
                     PGTAYVLFHHVMGECDGIRGVWGYVRGGMGGISNAIASAARERGAEIRTNAEVSQILV
                     KNGEAVGVALKDGTEFRARRIASGADAHVTFLKLMDGAHLPEDFLRAVRAIDYNSASL
                     KINISLSELPDFKAVPGTEPGPQHRGTIHISPTMEYIERAYDNAKYGCPSESPIIEAT
                     IPSVLDDTLAPPGKHVMSMFTQYFPYKLAPGLSLQDEKERYAERCFDLMNEYAPNFRR
                     SVLGRQVLSPADLERRFGLTGGNIMQGTMSLSSLSFMRPVPGYADYRTPIRGLYMCGA
                     ATHPGGGVMGACGYNAAREIIRDMGGKRRPAQPLDAQAPAHHS"
     gene            1107..1442
                     /locus_tag="VFD73_12535"
     CDS             1107..1442
                     /locus_tag="VFD73_12535"
                     /inference="COORDINATES: protein motif:HMM:NF028177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047869 - dimethylpropiothetin
                     dethiomethylase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfonioproprionate lyase family
                     protein"
                     /protein_id="HZI74822.1"
                     /translation="MPRHQLTIRDALAHLPGPRGERFAELFRHGSLSIEVYAPRTRDP
                     QSPHTRDEVYVVVEGSGHFRNGGERHPFGPGDLLFVPAGVEHRFEEFTDDLVVWVIFY
                     GPEGGEGDR"
     gene            1439..2554
                     /locus_tag="VFD73_12540"
     CDS             1439..2554
                     /locus_tag="VFD73_12540"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HZI74823.1"
                     /translation="MMERTLHREYYISPRIFELEREQIFYREWFCGGRDAELVRPGDY
                     RVIDVAGESILLVRTSEGRLVAHYNVCRHRGSRLVPGGSEGCFSRTIRCPYHSWTYSL
                     EGELRTAPFLDEADGLRKGELRLFPVAVETWGGFFFLQLTPTDRSEYHLADQLGGIPE
                     RLSRYPLNQLQSAHRVTYEVRANWKVILENYNECYHCGPVHPELCRLVPAFKHRGGSE
                     LDWERGIPHRDGAWTFTETGTSSRRPFEGLDPDEQTRHKGELIYPNCMISLSADHVTA
                     YTVWPRQPDHTTVVSDFLFHPSEIATSGFDPADAVTFWDRVNRQDWAVCENVQLGMQS
                     RVFERGYYAPMENASLDIRRYLEQRLGVQAERERTSD"
     gene            2517..3716
                     /gene="solA"
                     /locus_tag="VFD73_12545"
     CDS             2517..3716
                     /gene="solA"
                     /locus_tag="VFD73_12545"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: protein motif:HMM:NF008425.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050131 - N-methyl-L-amino-acid oxidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HZI74824.1"
                     /translation="MASRPSERGPPIKRDFEYIVLGLGGFGSAAAYWLARAAGREVLG
                     LEQFELGHVRGESQDHSRIIRLSYHTPEYVRLAKHAYAAWREVERDSGEQLIVRTGGL
                     DLGPAVSAIPLTNYSESMATAGVSFESLDADEIMRRWPPFRLTDDIHGLYQAESGIVM
                     AAKANAVHQRLARAHGAELRDRTRISGIRADAGEIRLEIDGAVHRCRRLVITAGAWSN
                     QVLDAFDLRLPLTVTQEQVTYFASPELQQFAPDRFPIWIWMDDPCFYGFPVFGEAGIK
                     AGQDAGGKEVTAESRSFEPDQDALGRVTAFLGQRIPGALGPIIYTKTCLYTLTPDRDF
                     VLDLVPGHTEAVIAIGGGHGFKFASLIGQILAQLAVDGHTDHPLETFQINRPILQLEN
                     PPKRYMV"
     gene            3713..>4839
                     /locus_tag="VFD73_12550"
     CDS             3713..>4839
                     /locus_tag="VFD73_12550"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HZI74825.1"
                     /translation="MTAQAQQMAGEEPTPGLRRVMGFRDLLLFYLVTGFTVRWVSTAA
                     AAGPSAVVIWLVGCLAFYLPLMATVLELSSRYPQEGGCYVWSKRAFGDFAGFITAWTY
                     WTCNLPYFPGLFYFTAAAALFIGGPEWRALAGNPLYFIIFSLAALAIAAGINVRGLAI
                     GKWLHNLGALGLWIPGILLMLFGLIAGLRFGSATAFTLSSMAPSTRLKDIVFWSTIAF
                     SLSGLESASMLGGEIESPRRNIPRALLLAGGLITGLYILSTVAMLVALPPREIQSLQG
                     FMQAIESAGVKVGAGWVAAPVAMLIVLGGLGQAGAWFAAGGRLPFVAGIDRFLPAAFA
                     RIHPRYGSPYVSLLSQAAIAALFIFLGQAGTTVKGAYDVLV"
BASE COUNT          880 a         1463 c         1510 g          986 t
ORIGIN      
        1 cgaaggccag aaagcgatcg agattctgac cggcgccgcg acaccgattc tggaccgctg
       61 gttcgaatcg gagcagctca aggtgacact cgccaccgat gccatcatcg gtgccatggc
      121 gtcaccgtcg atgccaggca ccgcctacgt gctctttcat catgtcatgg gcgaatgcga
      181 tggcatccgg ggcgtctggg gatatgtccg gggaggaatg ggaggcatca gcaacgcgat
      241 agcatccgcg gcccgggagc gcggagccga gattcggact aacgcagagg tctcacagat
      301 tttggtcaaa aacggcgagg cggtgggagt tgccctgaag gacgggacgg agttccgggc
      361 ccggcggatc gcgtccggcg ccgacgcgca cgtcactttc ctgaagctga tggatggcgc
      421 tcatctgcct gaagatttcc tgcgggcggt ccgcgcgatc gattacaata gtgccagcct
      481 caagatcaac atctcgctga gcgagcttcc ggacttcaag gcagtacccg gcactgagcc
      541 ggggccgcag caccgcggca cgattcacat ctcgcccacg atggaataca tcgagcgggc
      601 ctatgacaat gccaagtacg gctgtccctc agagagtcca atcatcgaag cgactattcc
      661 ctcggtgctg gacgacacgc tcgcgcctcc tgggaaacac gtgatgtcga tgtttaccca
      721 gtacttcccc tataagctcg ctcccggact ttcgctgcag gacgaaaaag agagatacgc
      781 tgagcgttgc ttcgatctga tgaacgagta tgccccgaat ttccggcgct cggtgctggg
      841 acgacaggtc ctctccccgg cagacctgga gcggaggttc gggctgaccg gcggcaatat
      901 catgcagggc accatgtccc tgagcagcct ctcattcatg cgtccggtgc cgggctacgc
      961 cgattaccgg acgccgattc gcggcctcta catgtgcggg gcggccaccc accccggcgg
     1021 tggggtgatg ggtgcctgcg gatataacgc ggcacgagag atcatccgag acatgggtgg
     1081 caagcgccgc cccgcccagc ctctcgatgc ccaggcacca gctcaccatt cgtgatgctc
     1141 ttgcgcatct ccccggaccc cgaggcgagc gctttgccga gttgttccga cacggcagcc
     1201 tgagcatcga agtctacgcc cccagaaccc gagacccgca gtcaccccat acccgcgacg
     1261 aagtgtacgt ggtggtggag gggagtggtc acttccgaaa cggtggagag cgccacccgt
     1321 tcgggccagg tgacctcctc ttcgtccccg ccggggtgga acacaggttc gaggagttca
     1381 ccgacgacct tgtggtctgg gtgatcttct atggaccgga aggtggagag ggtgatcgat
     1441 gatggaacgt accctccacc gcgagtatta catctctccg cgaatcttcg aactggaacg
     1501 ggagcagatc ttttaccgcg aatggttctg cggagggcgc gacgcagagc tcgtccgacc
     1561 cggtgactat cgggtcatcg acgttgccgg tgaaagcata ctgctggtgc gcacttctga
     1621 aggtcggctg gtcgcgcatt acaacgtgtg ccggcatcgc ggctcacggc tcgtgcctgg
     1681 gggaagcgag ggttgtttct ccaggaccat tcgttgcccg tatcactcct ggacctactc
     1741 tctcgagggg gagctcagaa ccgcgccctt cctggatgaa gccgacggct tgcgcaaagg
     1801 agagctgcgg ctctttccgg tcgcggttga gacctggggc gggttcttct ttctgcaact
     1861 gactccgaca gaccggtcgg agtaccactt ggccgatcag cttggcggta ttcccgaacg
     1921 cttgagtcgt taccccctga accagcttca atcggctcac cgggtcacct acgaggtgag
     1981 ggccaactgg aaggtgatcc tggagaacta caacgagtgc tatcactgcg ggccggtgca
     2041 tcccgagctg tgccgtctgg tgccggcgtt caagcaccgg ggagggtcgg agctggattg
     2101 ggagcgtggc attcctcatc gagatggggc ctggacgttc actgaaaccg gcacttcgtc
     2161 tcggcgtccc ttcgagggtt tggatccaga cgagcagact cgtcataagg gggagctgat
     2221 ctatcccaac tgcatgatca gcctgtccgc cgaccacgtc actgcatata ccgtctggcc
     2281 acgacagccc gatcacacca ctgtggtctc tgatttcctg ttccatcctt ccgaaattgc
     2341 tacatcgggg ttcgatcccg ccgacgctgt caccttctgg gatcgtgtga atcgccagga
     2401 ttgggctgtc tgcgagaacg tccagctggg catgcaatcg cgagtgttcg agcgcggata
     2461 ctacgctcca atggagaacg cgagtctcga catcagacga tacctggagc aaaggcttgg
     2521 cgtccaggcc gagcgagaga ggacctccga ttaagcgcga cttcgagtac atcgtcctcg
     2581 gactcggcgg atttggtagc gccgctgcct actggctggc gcgggccgcc gggcgggagg
     2641 tgctgggtct ggagcagttc gagctcggcc acgtccgagg tgaatcgcag gaccactcca
     2701 gaatcattcg actgtcgtat cacactcctg aatacgtccg cctcgccaaa cacgcctacg
     2761 ctgcctggcg agaggtcgaa cgggattccg gagagcagct catcgttcga accggtggtc
     2821 tcgacctcgg ccctgcggtg agtgcgattc ctctgacgaa ctactcggag agcatggcca
     2881 cagcaggtgt ctcctttgaa agtctggatg ctgatgagat tatgcgccgc tggcctccct
     2941 tccgcctgac cgacgacatc cacgggctat accaggccga gagcggcatc gtgatggcgg
     3001 caaaggctaa cgccgttcac cagcgcctgg cgcgagcgca cggagccgaa ctacgggacc
     3061 ggacccggat cagcgggata cgcgctgacg cgggagaaat ccggctcgaa atcgatggag
     3121 cggttcatcg ctgccggcgt ctcgtcatca ccgccggcgc gtggtccaac caggttcttg
     3181 atgctttcga cttgcggctg ccgctgaccg tcacccagga acaagtcacc tacttcgcca
     3241 gccccgagct tcagcaattt gcgccggacc gttttcctat ctggatctgg atggacgacc
     3301 cttgcttcta tggattcccc gtatttggcg aggctggtat caaggcaggg caggacgcag
     3361 gggggaagga agtgacggcc gagagcagga gctttgaacc agaccaggac gcgctggggc
     3421 gggtgaccgc ttttcttggc caacgtattc caggcgcact tggccccatc atctacacca
     3481 agacgtgtct ctacaccttg actcccgacc gtgacttcgt gcttgatctg gtgcccggcc
     3541 acactgaggc ggtgatcgcc atcggaggcg gtcacggatt taagttcgcg tcactgatcg
     3601 ggcaaatact cgcccagctc gccgtggacg gccacactga tcatccgctg gagacgttcc
     3661 aaatcaaccg tcctattctg cagctcgaga acccacccaa gcgctacatg gtgtgaccgc
     3721 tcaggcccaa cagatggcag gggaggagcc gaccccaggc cttcgccggg tcatggggtt
     3781 cagagacctc ctactgttct atctggtcac gggcttcacc gtccgctggg tcagcaccgc
     3841 ggccgcagcc ggtcccagcg ccgtcgtgat ctggctggtg gggtgtcttg cgttctatct
     3901 gcctctcatg gccacggtgc tcgagctctc ctcccgctat ccgcaggagg gcggatgcta
     3961 cgtctggagt aagagggcat tcggagactt tgccggattc atcacggcgt ggacgtactg
     4021 gacctgcaat ctgccctact tcccgggatt gttctatttc accgccgcag ccgcactctt
     4081 catcggcgga ccagagtggc gggccctcgc cggaaatccg ctctacttca tcatcttctc
     4141 gctcgcggcg ctggctatag cggcgggaat caacgttcgc ggactggcca tcggcaaatg
     4201 gctgcacaat ctcggggcgc tggggctgtg gatccctggt atcctgctca tgctgttcgg
     4261 cctcattgcc ggactccgtt ttgggtcggc gaccgcattc acattgtcga gcatggcgcc
     4321 cagtactcgg ctcaaggata tcgtgttctg gtccacgatt gctttttcat tgagcggcct
     4381 ggagagtgcc tcgatgttag gcggggaaat tgaatctccc cgccgcaaca ttccccgggc
     4441 attgctcctg gccggcgggt tgatcaccgg tctctacatc ttgagcacgg tagccatgct
     4501 ggttgctctg cccccgcggg aaatccagag tttgcaggga ttcatgcagg caatcgagag
     4561 cgccggggtc aaggtgggtg ccgggtgggt ggctgcaccc gtagcgatgc tcatcgtttt
     4621 gggagggttg ggacaggctg gggcgtggtt tgccgcggga gggcggttgc cgtttgtggc
     4681 ggggatcgac cgttttctac cggctgcgtt cgcgcggata cacccgcgct atggttctcc
     4741 atatgtcagt ctgctcagtc aggctgcgat tgccgcgctc ttcatttttc tgggccaggc
     4801 gggcacgact gtcaaaggcg cttacgatgt gctggtgag
//
LOCUS       DASRPQ010001103         1314 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_446162, whole genome shotgun sequence.
ACCESSION   DASRPQ010001103 DASRPQ010000000
VERSION     DASRPQ010001103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1314
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_446162"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..567
                     /locus_tag="VFD73_12555"
     CDS             <1..567
                     /locus_tag="VFD73_12555"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI74826.1"
                     /translation="LQGDAAATRMIIGAQDGPCVLVGHSYGGAVISEAGTGPNVAALV
                     YVCAFAPDKDESVGTLISGFPADGPQPPILPPRDGFLFLDRDKFHASFAADLPAGLAA
                     FMADSQVPWYVDAPAGQITDPAWRTKPSWYMVTTEDRMIPLAAQRAMSQRIGATVTEV
                     AASHSVYLSQPALVADLIKQAAQGAAAY"
     gene            694..>1314
                     /locus_tag="VFD73_12560"
     CDS             694..>1314
                     /locus_tag="VFD73_12560"
                     /inference="COORDINATES: protein motif:HMM:NF024852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HZI74827.1"
                     /translation="MKVALLGATGFVGSALLQEALDRGHVVTAIVPDPEKLEEREGLT
                     AKAGDVYDTASLTTLIRGHEAIISAFNPGWKNPNLYDDQVRGTGSIIAAIKKAEIKRV
                     LWVGGAGGLEVTPGVRLVDNPDMPLWVKPGALATINAPDQLRKEPELEWSYLSPSAEL
                     TPEQRTGRFRLGNDQLLVDAAGQSKISVQDYAVAMIDELERPTHVRQ"
BASE COUNT          262 a          428 c          403 g          221 t
ORIGIN      
        1 ctccagggcg acgccgccgc gacgcggatg atcatcggcg cgcaagacgg cccgtgcgtg
       61 ctcgtcgggc actcctacgg cggcgcggtc atcagcgaag caggaaccgg cccgaacgtg
      121 gcggccctgg tctacgtctg cgcgttcgca cccgacaagg acgagtcggt cggcacgctc
      181 atcagcggat tccccgccga tggcccgcag ccgccgatcc tgcctcccag ggacggattc
      241 ttgttcctgg accgggacaa attccacgcc tcattcgccg ctgacctgcc cgccggcctg
      301 gccgccttca tggccgactc acaggtcccc tggtacgtgg acgcccccgc cgggcagatc
      361 accgaccccg cctggcggac caagccaagc tggtacatgg tcaccaccga ggaccggatg
      421 atccccctgg ccgcccagcg cgccatgtcc cagcggatcg gagcaaccgt aaccgaagtg
      481 gcagcaagtc actccgttta cctctcacaa ccggccctcg tggcggacct catcaagcag
      541 gccgcccaag gcgcagccgc ctactaactc cacccagcgc gaccagccct cagcctgggg
      601 ctggtgtggc ggcatccctt tgaccttgct ggcttttccc tgagggcggc agctagcgca
      661 agtgctgccg ctaccggaca tgaggaggat gaaatgaagg tagccctgct gggtgccaca
      721 ggtttcgttg gctcagcatt gcttcaggag gcgctcgacc gagggcacgt ggtgacagcg
      781 attgtgccgg acccggagaa gcttgaagaa cgcgagggtc tcacagcgaa ggctggcgac
      841 gtttacgaca cggcctctct tacgacgctg atccgaggac acgaagccat tatcagcgcc
      901 ttcaatcctg gatggaagaa cccgaacctt tatgacgacc aggttcgagg aacaggatcc
      961 atcatcgccg cgattaagaa ggcggaaatc aaaagggtgc tctgggtggg tggagcgggc
     1021 gggttggagg tcacacctgg agtccgtctt gtcgacaacc ctgatatgcc gctctgggta
     1081 aagccaggtg ccttggcgac gatcaatgct ccggaccaac tgcgaaaaga gcctgaactt
     1141 gaatggtcct atctgagccc ttcggcagaa ttgacgcccg aacaacgtac gggaaggttc
     1201 cgcctcggaa acgaccagct cttggtagac gctgccggcc agagcaagat ttcggttcag
     1261 gattacgccg tcgcgatgat cgacgaactg gaacgcccga cccatgttcg gcag
//
LOCUS       DASRPQ010001104        12372 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2324668, whole genome shotgun sequence.
ACCESSION   DASRPQ010001104 DASRPQ010000000
VERSION     DASRPQ010001104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12372
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2324668"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            219..656
                     /locus_tag="VFD73_12565"
     CDS             219..656
                     /locus_tag="VFD73_12565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74828.1"
                     /translation="MIVADIGEYRINKGVGYLLFTPVGQPNYWLACAALAVREVIGPT
                     PPPPPAEPATAATPPSTPPPATPTVAPTPPAPLPPLPGETATAPAPDPAPPARTATHE
                     RLRQANAGGRRAGVDHGANAATEADFVQGVTEERAPKPPPAAR"
     gene            684..1739
                     /locus_tag="VFD73_12570"
     CDS             684..1739
                     /locus_tag="VFD73_12570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74829.1"
                     /translation="MPQTVDYEDLLRGTALAVGLNPDDLAGGADGDFANLRLLHGQRL
                     DQVWIHREWPFVCPTERRAFRDPYVALTAYAAGAEVIYVGPGKYYQTLRSATGQAPAT
                     WDGTTWTTNLAYWAESALTYSAQEYSASAAYVRGQQVYYSPTGAYYQLHAATSTGNLP
                     TDTSYWGVLTAFDPYIDYEQAGQTAFDHAFRAWSHNPHTDRRAVQLDAWLTHRGLQVP
                     GALRPAVWVDLRERCPQLTGEVYSATTAYAEGDQVYFREMPSYRGNFYTCATATTAGE
                     SPANTAAKWTLVEIPNDFARYLIHAAAAGYLTTGTEAERADYAREAREAQSALDQLTL
                     LHAGQCAARPKTRYRTR"
     gene            1743..2102
                     /locus_tag="VFD73_12575"
     CDS             1743..2102
                     /locus_tag="VFD73_12575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74830.1"
                     /translation="MNTRIVAADRYVFTENAGTGVEKSRVADAYPGWLFSALMTNHSA
                     STRWLQIFDATSLPANGAEPLVSIQVPTLSTGVFDIGHAVPIRNGIVVASSSSGPTLT
                     VETVDSAKFLIAWKRKA"
     gene            2106..4856
                     /locus_tag="VFD73_12580"
     CDS             2106..4856
                     /locus_tag="VFD73_12580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74831.1"
                     /translation="MTFPSFLRARAAGLAVLASLAAAVQTFGAVSVTPGGGNGSGSGS
                     ITNLSPYSAALVSASAATVNLTNSARVYTNYSGQTVTNLPTSITGTNGYVLVTNAGVY
                     SVSLSLTYRSAGSATRTNKFEILTNSVNGSGTSSGIGFYSQSQYASNYHSGAATAQLF
                     LPSNTYVMAGLSQANGAPTNDLVIEAIYLGVTLVPGSTYGGSSGSSGQPPSTGLTNIA
                     AFQAAGQSNRLAVTSPGGYVTNAARLYYVETNQSQLLSNIVAGAVSGDVVRLGAGRFN
                     IGLQSLRVPPGVTLEGAGRQATVIAGTAALTNSHLIVVISSTSVVQNLSIVCANSTVY
                     HQAGLGFYAPNADPAPVGAVVRNVYVQGDSDAVFMSATNFFSVRFFDCLLKSSWDVYI
                     QSYAGAGNASSNYVELWNCTLLADKEGSTYAAGYGANNTTKAAQIAGTARFYNCDLIS
                     TNSDTAWGIKLDAYSDVTVVGGTIRVAGTNTVYTVDNINTTWSPTTAPIRVFNTTLTD
                     VYQAPGSVITYPAEQFAALTASGLTVGTDATVGGDLSVTSGTGTFQGAVVNDDLSLAY
                     PTFSKALMIDAAGKVTHVTGTGTYVKADGTTGDPSGSGDVTAASTFPADNQLVRSDGT
                     SKGVQGSGVTLSDGSTMSGVESLSTTNGHHSARGGFHPGTTNILLVTNVVILLTNAPH
                     SITVAPALTATSNTLMMSLGNLPAAGAPDDTWFLTLELTNATTGVYNFPSQIDYRGTT
                     PFVAQAPSTNLYVLRWNGRSLYIYGIQDWTSGTGPLLAATNATSYGATINGATLDNHK
                     QHRTTNYIDGDITINCSTDVSANYTNAVAGNRSITLSTPVIGTSGSLSLTSDGSARTL
                     AILCAQATITWLSTNDTATSTNILTTASKDSLFAWRVRQKHISGSAMITNIQCWVKNQ
                     TP"
     gene            5614..8301
                     /locus_tag="VFD73_12585"
     CDS             5614..8301
                     /locus_tag="VFD73_12585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74832.1"
                     /translation="MSRILALLLLLNAKPLFGLTYLYVNTDAGSGGDGSVGSPWNHLR
                     TAITASQTDTALAAGDVIVLYWGVTADNQNIVQTHWDSITTSPTSRLIIIGDSPTPGI
                     YNTSAARIEGDGVNLLYNNAPGDVEIYNVQFKLINGNGSLNACRLATQNVGAGRTDNF
                     CRISRCTFVLPNGGYATYNSNFADGASPAHGRIVVDNCVSYGGAFGSANTGVENYNNT
                     VYGGADGFVDPQIVINCLAAGQSNKGFNNVGTGGGLSDYNASSDATAPGAHSRISQTF
                     QFVDAAGGNAHLLATDTGAKDFGLSDPASGLFTNDVDNATRFGAWDIGADEVTTYWAP
                     DATNSIDWGNHTGVPGGIPRRTTIAATLTSSATASQINSAVAAAASNTVVLLGAGFYG
                     NVGGDINLASKAGVTLRGSGKYDTILPCAIYTDQYAPSSTGAAIFSGYTIGSTSIFMA
                     ATPNAAVQPGLLAVIAQDDDTNVVATTSGPARRMRFTVQIQSVSGTNVTFFPPLPMTM
                     ESRWSPYLLHTAFSGLGASMMGIEDLTVTNAASEDATIYFSAAQRCWMKNVRVLNGVN
                     TFSQFLYSFQCEARDCDFRDAESFPANQDGYGVYLWEDSSWCRVEGCIFDRLAIGVLA
                     SSSSCNAVAYNYCGAMSFQFGQGWVNQTGGINANHGAHPMFNLFEGNVTEMFQSDGYH
                     GSASKGTLLRNWLHGTNSLQTNALVGQYSANRKMISLERASYEWTAVGNILGDSSWTN
                     DTGFVYQMSGGGNDYESSPCIWRLGYPSVANNGTNSGGAGQAPNFAAPYRNSYPDAKV
                     ELTLLRHGNYDFKTLSISNTAGLNTSIPMSLLYTNGPGTTGPTQSVTRWPAFDPSQPN
                     LRHPTNIVAGLRFFSPASGGVASSAIQSRSGPGRPTKPR"
     gene            8303..8632
                     /locus_tag="VFD73_12590"
     CDS             8303..8632
                     /locus_tag="VFD73_12590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74833.1"
                     /translation="MSAHLENDSDLWRRTVSEDLRELKESVKELTHAWTETRLNTATT
                     VKMEAVQRELEAERTIRREDVQKIRDDLTTAKATIATLKWVAAALGSVMAGGWAVFLV
                     VAKHFLK"
     gene            8629..8883
                     /locus_tag="VFD73_12595"
     CDS             8629..8883
                     /locus_tag="VFD73_12595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74834.1"
                     /translation="MKETLIKLGTGLIAKLLRYALTVAGTAFATVTPDGKPVELEHVA
                     AGLSAVVVALGWSLWEDYVKRKAATAAAAAPALEPSKRSD"
     gene            8930..11302
                     /locus_tag="VFD73_12600"
     CDS             8930..11302
                     /locus_tag="VFD73_12600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74835.1"
                     /translation="MNELLPAVALGPGEVAAARNNRCRSGDMEPRRGLAKLPWTNRVT
                     TGAASVPVPFGVIHGVGRFRDSDDTIWGLIAADGRIYRTRESNGAVEVPLPSGVLIEG
                     PVHFEQAYHGLVAFRGAGQDVLHLTALDQGFNVITELTTPTGTSAENPTDGTEAIPSA
                     DRGSWIGGRMFVPYATATEKDMVAISDYLNATRYLPIRSQARINQGSSDALISVLPFG
                     KTTSSSVAICFKAASIYALYGVQGSLAQMQQDIVTGEYGLCGPKAALNVGRDEADAAD
                     EVWFLAMKKGICRITYDRDGRLGVSRVLPSDEMQRTMDRVNWRVAQTTATFALWDQKL
                     YAALPLDDAQAQGPALLTAGQVYSGSSYVHFVEPGATYYWEPGSHEVSLTNGTETLTD
                     KSTFVAQGISITLAGTGAAVTVTALLRRVWVDVNNAVLVHDFLTGKWQGQDDGSAIVV
                     KDWLTLPHAGAERLFALGADGFINLYEELPHDDTATEALVDVRDGFFPGTWLGYFDIP
                     VTRGKRYAYALNAYVTSITNGTETLTAAAGVFTAQASRITYNGPAGTFAPAPVYEITW
                     TIVQEEIDHDWTTRAYRTGVQRQRNIWAKAQVSTWWPSLTIYEVTNGVSESVARLTGR
                     TRSRTTYNRPFDRAPWDETNYNDDHATAGREDYAVLLSEARTASGAIVAGVRYLVESS
                     DVTSACSIDYNGVTYSNGQTFVGVASVGTFTVLTGTPLVYPPGSYLWLDRGVGSGVDP
                     DLHQDWDQDVKLRGRGGSVQMRIRNQQGRCVTKSIGLYSEPADKRPGGRT"
     gene            11309..>12372
                     /locus_tag="VFD73_12605"
     CDS             11309..>12372
                     /locus_tag="VFD73_12605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74836.1"
                     /translation="MALSFTVTRGYSFPAGRPVTLAALRLAALPGLAFTGSVASGDMA
                     DGAVTPAKASPGAYFYGAASGTNAYAVTLSPALGAYANGVQIVVKFTNANTTAAAPTL
                     DVNLLGAKGIYHRSGQVPKAGDLQANEIFVLVYNSSRNTGAGGWDILGKVPNDLVRAG
                     TSGGTGAAYTFTTANGAAATDLAGLSNQVLLWKCSTANTSTTPTLAIDGLTAKTIVKR
                     TGAAVALGDLVQDATYILLYDATLDRVVVMNIGQGRPEMEVVATDSGAANAYAIAPTP
                     AYTALTELQNRFLTFLPANTNTGASTLAVSGLTATAITKWGSVPLGPGDLRANRPATV
                     FYDGTRFQLTGCPPPAAGKA"
BASE COUNT         2339 a         4224 c         3710 g         2099 t
ORIGIN      
        1 ggcgaatggt gccgcgtgcg ttccaccggc acccgcctgc aggtcggtta tcacagcacg
       61 ccgatctggc gtcccgccgt gatccaggaa actcggactg gattgcgctg gaagaagacc
      121 tttgccgagc cgtccccaac caacccaacc aattcctctg tatgaatgga tctcttaccg
      181 gccagcgcgt gcgttgcgtg gcctccccca gccaggacgt gatcgtcgcc gacatcggcg
      241 aataccgcat caacaagggt gtcggctact tgctcttcac gcccgtcggc cagccgaatt
      301 actggctggc ctgcgccgcc ttggcggtgc gcgaagtgat cggccccacg ccgccgccgc
      361 ccccggccga gcccgcgact gccgccacgc cgcccagcac gccacccccc gccacgccca
      421 cggtggcccc cacgccgccg gccccgctcc cgccgctccc gggcgagacc gcgaccgcgc
      481 ccgcgccgga tccggccccg ccggcccgca ccgccacgca tgagcgcctg cgccaggcca
      541 acgccggcgg ccgccgtgcg ggcgtggacc acggggccaa cgcggccacc gaggccgact
      601 tcgtccaggg cgtgacggaa gagcgggcgc ccaaaccgcc ccccgccgcg cgctaaccgg
      661 tccaaacgct cggacgcgct gccatgccgc aaaccgtcga ttacgaggat ctgctccggg
      721 gcacggccct ggccgtcggc ctgaaccccg acgacctggc cggcggcgcc gacggcgact
      781 tcgccaatct gcggctgctg cacggccagc gcctcgacca ggtctggatc caccgcgagt
      841 ggcccttcgt ctgccccacc gagcgccggg ccttccgcga tccctatgtg gccctcaccg
      901 cctacgccgc cggcgcggag gtgatctacg tggggccggg caaatactac cagaccctgc
      961 gcagcgccac cggccaggcg ccggcgacct gggacggcac cacctggacg accaacctgg
     1021 cctattgggc cgagagcgcc ctgacctaca gcgcccagga atacagcgcc agcgcggctt
     1081 acgtgcgggg ccaacaggtc tattacagcc cgaccggcgc ctactaccag ctgcacgccg
     1141 ccacgagcac cggcaacctg ccgaccgaca cgagctattg gggcgtgctg accgcgttcg
     1201 atccctacat cgattacgag caggcggggc agacggcctt cgaccacgcg ttccgcgcct
     1261 ggtcgcataa cccgcacact gaccgccgcg ccgtgcagct cgacgcctgg ctgacccacc
     1321 gcggcctgca ggtgcccggc gccctgcggc cggcggtgtg ggtggacctg cgcgagcgct
     1381 gcccgcagtt gacgggggag gtctacagcg cgaccaccgc ctacgccgag ggcgaccagg
     1441 tctatttccg ggagatgccc tcctaccggg ggaacttcta cacctgcgca accgccacca
     1501 cggccggcga gagcccggcc aacacggccg ccaagtggac gctggtcgag atccccaacg
     1561 actttgcgcg ctacctgatc cacgccgcgg ccgccggcta cctgaccacc ggcacggagg
     1621 ccgagcgcgc cgattacgcc cgggaagccc gcgaggcgca gtccgccctc gaccagctca
     1681 cgttgctcca cgccggccag tgtgccgccc gccccaagac ccgataccgc acccgttgat
     1741 ctatgaacac tcgcattgtc gccgccgacc gttacgtctt caccgaaaac gccggcaccg
     1801 gcgtggaaaa gtcccgggtg gccgatgcct atccgggctg gctgttctcg gcgctcatga
     1861 ccaaccactc ggccagcacc cgctggctgc agatcttcga tgcgaccagc ctgccggcca
     1921 acggcgccga gccgcttgtc agcatccagg tgccgaccct gtccactggc gtcttcgata
     1981 tcggccacgc cgtccccata cgcaacggca tcgtggtggc ctcgtccagc agcggcccca
     2041 ccctgacggt ggagaccgtc gacagcgcca agttcctcat cgcctggaaa cgcaaagcct
     2101 gacctatgac ctttccctcc ttcctccggg cccgcgcggc gggcctggcc gtcctcgcca
     2161 gcctggccgc ggccgtccaa acgtttggcg cggtctcggt cacgcccggc gggggcaatg
     2221 gctccggcag cgggagcatc accaacctgt cgccctacag cgccgccctg gtctcggcgt
     2281 cggccgccac ggtcaacctg acgaactcgg ccagagtcta cacgaactac tcggggcaga
     2341 ctgtgaccaa tctgccgacc agcatcaccg gcaccaacgg ttacgtcctc gtgaccaatg
     2401 ccggggtcta ttcggtcagc ctatccctaa cctaccgcag cgcaggttcg gccacgcgca
     2461 caaacaagtt cgagatcctg accaactccg taaacgggtc cgggaccagc agcggcatcg
     2521 gcttttactc tcagtcccag tatgcctcga actaccacag cggagccgcc accgcgcaac
     2581 tgtttctgcc gagcaacacc tacgtgatgg cggggttgag ccaggctaac ggcgcgccca
     2641 ccaatgacct cgtgatcgaa gccatctatc tcggggtcac gctggtgcca ggttcgacct
     2701 acggcggcag cagcgggagc tctggccagc caccctcgac cgggcttacg aatattgccg
     2761 cgttccaagc tgcgggtcag tcgaaccggc tggccgtgac cagcccgggc ggatatgtca
     2821 ccaacgccgc ccgcctctat tacgtcgaaa ccaaccagtc ccagctgctc tcgaatatcg
     2881 tcgcgggcgc agtcagcggg gacgtggtgc gcttgggagc agggcgattt aacatcggcc
     2941 tgcagtccct ccgggttcct cctggggtca cgctggaagg agcgggccgc caggccaccg
     3001 tgattgccgg cacggccgcg ctcacaaaca gccatctgat tgtggtgatc tcctccacgt
     3061 ccgtggtgca gaatctctcg atcgtctgcg ccaacagtac ggtctaccac caggccgggc
     3121 tcggatttta cgctcccaac gcggatccgg ctccggttgg cgcagtggtc cgcaacgtct
     3181 atgtgcaagg agattccgat gcagtgttca tgtctgccac caacttcttt tcggtgcgct
     3241 tctttgactg tctgctcaag tcgagttggg atgtttacat ccagagctat gccggagcgg
     3301 gaaacgcttc gagcaactac gtggagcttt ggaattgcac gctcctggcc gacaaagagg
     3361 ggagcacgta cgcggccggg tatggcgcaa acaacaccac gaaagcggca cagattgcgg
     3421 gcactgccag gttctacaat tgcgacctca tttcgaccaa ttcggatacc gcttggggaa
     3481 tcaagctcga cgcatactcc gacgtgaccg tggtcggagg gacgatccga gtggcgggaa
     3541 cgaatacggt ttacacggtg gacaacatca acacgacgtg gtcacccacg acggccccaa
     3601 ttcgggtttt caatacgacg ctgactgatg tgtaccaggc tcccgggagt gttatcacat
     3661 acccggcgga acagtttgca gcattgaccg cttcgggtct cacggtcggc acagacgcaa
     3721 cggttggagg tgacctttcg gttacgagcg gaacgggaac attccaaggc gctgtggtga
     3781 atgacgattt gtccttggct tatccgacgt tctccaaggc gttgatgatc gacgccgcgg
     3841 gcaaagtgac gcatgtcacc ggaaccggca cctacgtgaa agcggacggg acgacgggcg
     3901 atccttccgg tagtggtgac gttacggcag cgtcgacatt cccggcggac aaccagctgg
     3961 ttcggtctga tggcaccagt aaaggcgtgc aaggctccgg agtgacgctg tcggacggct
     4021 cgacgatgtc tggggttgag tcgctctcga ccaccaacgg gcatcattcc gcgcggggcg
     4081 gattccaccc tgggaccaca aatatccttt tggtcaccaa tgtcgttatt ctcctcacca
     4141 acgcgcctca ctcgatcacg gtggcaccgg cactgacggc gacgagcaac acgcttatga
     4201 tgtcgctcgg caacctgccg gccgccggag ccccggatga cacgtggttc ctgaccttgg
     4261 aactgaccaa tgcgaccacc ggggtctaca acttcccgtc gcagatcgat taccgcggca
     4321 cgacaccgtt tgtggctcag gcaccgtcca caaacctcta cgtgctgaga tggaatggcc
     4381 ggtcgctcta catctacggc atccaggatt ggacttccgg caccgggcca ctgttggccg
     4441 cgaccaatgc gacgagctac ggagcgacca tcaatggcgc cacgttggac aaccacaagc
     4501 agcacaggac cacaaactat atcgatggag acatcaccat caattgttcg actgacgttt
     4561 cggccaacta cacgaatgcg gtcgctggca atcgttccat cacgctatcg acgccggtca
     4621 ttggcacttc cggaagccta agcctcacct cggatgggag cgcgcgaacg ctggccatcc
     4681 tgtgcgccca ggcaacgatc acctggctca gcacgaacga cacggcgacg tccacgaaca
     4741 tcctgaccac agccagcaag gactcgcttt ttgcgtggag ggttcgacag aagcacatct
     4801 ccggatctgc tatgattacg aacattcaat gctgggtgaa gaaccaaacg ccatgagccg
     4861 gattcttgtt ctcatttgct ggctggcagt gtgtccatca ttgctgtccc aagccccact
     4921 ggagtcactg ctgcttctaa cgccgccatc atctggtgga ggaggcggtg gaggaatctc
     4981 gtttgtggct gcttacggaa gaaccaatta caccgatgac ccggtaacgg tgtcgaatgt
     5041 ggtggtgcca gccgggggag tgataatcgc tttcgtgacc accggaggag gatctgaaac
     5101 gctcacgagc gttaagttca acaccagcga aacctttaca tccatcacaa acctgaacga
     5161 taagtcaggc ggggtggttg cgaatcttgg ggcctacatc ctccacaacc cgacagcgac
     5221 caccgcaaat gtggtctgtg acacgagtgg cattccaaac ggatttccag ttattcacgt
     5281 tctggtctac tcgggggtga aaaatgatgc tggggcaact ggtgcataca gggcgttgac
     5341 gtgcacggga gacggtggtg ggtcgggtgt ggacgtgtcg gtctcagcaa cgtctgggga
     5401 ctgggtggtt ggctcgtgcg caaactggga caacgccccc gcaggaacgc tggccgcgtt
     5461 gagtcacacg tcaaggcgaa ccgaccttgc tgttggcggt tcagcctacg atctttcgac
     5521 tcaagacaca gccgggacgg ttagtgggac cacgtctctg acgtggacgg cggacgagtt
     5581 ttgcacatcg attggattcg cactcgtgcc ccaatgagcc gcatcctcgc actcctgctc
     5641 ctgttgaacg caaagccgtt gttcggattg acataccttt atgtgaacac cgacgccggc
     5701 agcgggggtg acggctctgt cggatctccg tggaatcacc taaggacagc tatcacggca
     5761 agccaaaccg acacggcact ggctgctgga gatgtcatcg ttctctactg gggtgtcacc
     5821 gccgacaatc agaacattgt tcaaacccac tgggacagca tcaccacgtc gccaacgagc
     5881 cgtcttatca ttataggaga tagtccaacc cctgggatct acaacacttc agcagccaga
     5941 attgagggcg acggagttaa tctgctctac aataacgcac ccggcgacgt tgagatctac
     6001 aatgttcagt tcaagctcat caacgggaat ggcagtctaa atgcctgccg gctcgcgacc
     6061 cagaacgttg gagctggtcg gacggataac ttctgccgga tatcgcgctg cacattcgtg
     6121 ctcccgaatg gggggtatgc gacctacaac tccaactttg ctgacggcgc ttcgccggcg
     6181 catggccgaa tcgtggtcga taactgcgtt tcctatggcg gtgcatttgg gtccgccaac
     6241 acgggcgtcg aaaactacaa caacacggtt tacgggggcg cggatggatt cgtggatccg
     6301 cagatagtga tcaattgcct ggctgccggc cagagcaaca agggattcaa caacgttggc
     6361 accggaggcg ggttgagcga ctacaacgca tcgtcagatg ccaccgcgcc tggagctcac
     6421 agtcgaatta gccagacctt ccaattcgtg gatgctgccg gtggaaacgc acaccttttg
     6481 gcgaccgaca cgggcgcaaa agatttcggc ctgagcgatc ccgccagcgg gctcttcacc
     6541 aacgacgtcg ataacgccac ccgttttgga gcctgggata tcggcgctga cgaggtgaca
     6601 acctactggg cacccgacgc caccaactca atcgattggg gcaatcacac gggggttcct
     6661 gggggcatcc cgcgccggac cacgatcgcg gcgacactga cgtcgtccgc gacggcatca
     6721 cagatcaaca gcgccgtcgc tgcggccgcg tccaacacgg tggtcctact gggggcaggc
     6781 ttctacggaa atgtgggtgg tgacattaac ctggcatcca aagctggcgt cacgctgcgc
     6841 ggatcgggca agtacgacac catcctcccg tgcgccatct acacggacca atacgcgccg
     6901 tcgagcactg gcgcggctat ctttagcgga tacaccattg gttcgacgtc aattttcatg
     6961 gcggccaccc cgaacgctgc cgtgcagccg gggctcctgg cagtcatcgc tcaggacgat
     7021 gacacgaatg ttgtggcaac gacatcggga cccgctcgtc ggatgcggtt caccgtacaa
     7081 attcaatccg tttcagggac gaatgtgacg ttctttcccc cgctcccgat gacgatggag
     7141 tctcgctggt cgccgtatct cttgcacact gctttctctg gtctcggggc cagcatgatg
     7201 ggaatcgagg atttaacggt gaccaatgct gcaagcgagg acgcgacaat ctatttctcg
     7261 gcagcgcaga ggtgctggat gaaaaacgtc agagtcctca acggggtcaa cacgttttcc
     7321 cagtttctat actcgttcca gtgcgaagcg cgggactgtg attttcgaga tgcggaatcg
     7381 ttcccggcca atcaggacgg atacggggta tacctctggg aggattcatc ctggtgccgg
     7441 gttgagggct gcatctttga ccggcttgcg atcggcgtgc ttgccagcag cagctcttgc
     7501 aatgcagtgg cgtataacta ctgcggggca atgtcattcc agttcgggca ggggtgggtg
     7561 aatcagaccg ggggtatcaa cgccaatcac ggcgctcatc ccatgttcaa tctgttcgag
     7621 gggaacgtga cggagatgtt tcagagtgac ggctatcacg gctcagcgtc caagggcacc
     7681 ctcctccgca actggctcca cggcaccaac agccttcaga ccaatgcatt ggtcggccaa
     7741 tactccgcga acaggaaaat gatttcgctt gagcgcgcgt cctacgaatg gacggcggtc
     7801 ggcaatattc tgggagactc cagctggacc aatgacacgg gattcgttta ccagatgagc
     7861 ggcggcggaa atgactacga gtcgtccccg tgcatttgga ggctcggcta cccgtccgtg
     7921 gccaacaacg gcaccaatag tggtggagcc ggtcaggcac caaacttcgc tgcgccttac
     7981 cgcaactcct acccggatgc caaggtggaa ttgacgctgc ttcgtcacgg caactacgac
     8041 ttcaagaccc tgtccatttc taatacagcc ggtctcaaca cctcgattcc catgagcctg
     8101 ctctacacca acggccccgg cacgacaggc ccgacccaga gcgttactcg ctggcccgcc
     8161 ttcgacccgt cccagccaaa ccttcggcac ccgactaata tcgtagctgg gttacgattc
     8221 ttttctcctg ccagcggagg cgttgcgtca tcggccattc agtcacgaag cggccccggc
     8281 cggccgacta aaccgagata acatgagcgc ccatctcgaa aacgacagcg atctctggcg
     8341 ccgcaccgtc tcggaagatc tccgggagct caaggagtcc gtcaaggagc tcacccacgc
     8401 ctggactgaa acccgcctca acaccgccac gaccgttaag atggaggcgg tccagcgcga
     8461 gctcgaggcc gagcgcacca tccgccgcga ggacgtccag aagatccgcg atgacctgac
     8521 caccgccaag gccaccatcg ccaccctcaa gtgggtcgcg gccgcgctcg gctcggtcat
     8581 ggccggcggc tgggcggtgt tcctggtggt cgccaaacat ttcctcaaat gaaagagacc
     8641 ttgatcaaac tcggcaccgg cctcatcgcc aagctcctgc gctacgcgct caccgtcgcc
     8701 ggcaccgcgt tcgccacggt cacgccggac ggcaagcccg ttgaactcga gcacgtggcg
     8761 gcgggcctct cggccgtggt cgtggccctc ggctggtccc tctgggaaga ctacgtcaaa
     8821 cgcaaggcgg ccactgccgc ggccgccgcg cccgcgctcg agccgtccaa acgttcggac
     8881 tgacatgccc tccaccccgc ccctgctggg agacaccgcc ttcgtcggcg tgaacgagct
     8941 gctgcctgcc gtcgccctcg ggcccggcga agtggcggct gcgcgcaaca accgctgccg
     9001 ctccggcgac atggagcccc gtcgtggcct ggccaagctg ccctggacca accgcgtgac
     9061 caccggcgcc gcctccgtgc cggtgccctt cggcgtgatc cacggcgtgg gccgcttccg
     9121 ggacagcgat gacacgatct ggggcctcat tgcggccgat gggcgcatct accgcacgcg
     9181 cgagagcaat ggcgcggtcg aggtgccgct gccctcgggc gtgctcatcg aggggccggt
     9241 gcattttgag caggcctacc atggcctggt cgccttccgc ggcgcgggcc aggacgtgct
     9301 gcacctcacc gccctggacc agggcttcaa cgtgatcacc gagctgacca ccccgaccgg
     9361 caccagcgcg gagaacccca ctgatggcac ggaagccatt ccctccgccg accgcggctc
     9421 ctggatcggc ggccgcatgt tcgttcccta cgccaccgcc acggagaagg acatggtcgc
     9481 gatctcggac tacttgaacg ccacccgcta cctacccatc cgcagccagg cccgcatcaa
     9541 ccagggctcg agcgacgcgc tcatcagtgt gctgcccttc ggcaagacca cgagcagcag
     9601 cgtggcgatc tgcttcaagg cggccagcat ctacgcgctt tacggcgtgc agggctccct
     9661 cgcgcagatg cagcaggaca ttgtcaccgg ggaatatggc ctgtgcgggc ccaaggcggc
     9721 gctcaacgtg ggccgggacg aggccgatgc cgcggatgaa gtctggttcc tggccatgaa
     9781 gaagggcatc tgccgcatca cctacgatcg ggacggtcgc ctgggcgtct cgcgggtgct
     9841 gccctccgat gaaatgcagc gcacgatgga ccgggtcaat tggcgggtgg cccagaccac
     9901 cgccaccttc gcgctctggg atcaaaaact ctacgccgcc ctgccgctcg atgatgccca
     9961 ggcccaaggc cccgccctgc tcaccgccgg ccaggtctac agcggcagca gctacgtcca
    10021 tttcgtggag cctggcgcga cctactactg ggaacccggc agccatgaag tctcgctcac
    10081 caacggcacg gagacgctca cggacaagag caccttcgtt gcccagggca tttccatcac
    10141 gctggctgga acgggtgccg cggtcacggt cacggccctg ctgcgccggg tgtgggtaga
    10201 cgtcaacaac gccgtgctgg tgcacgattt cctcaccggc aaatggcagg gccaggacga
    10261 cggctcggcc atcgtggtca aagattggct cacgctgccg cacgccggcg ccgagcgcct
    10321 gttcgccctg ggcgcggacg gcttcatcaa cctctacgag gagctgcccc atgacgacac
    10381 cgccacggag gcgctggtgg acgtgcggga cggattcttt cccgggacct ggctgggcta
    10441 cttcgacatc ccggtcacgc ggggcaagcg ctacgcctac gcgctcaatg cctacgtgac
    10501 ctcgatcacg aacggcaccg aaaccctgac cgcggccgca ggcgtgttca ccgcccaggc
    10561 ctcccgcatc acctacaacg ggccggctgg gacgttcgcg ccggcgccgg tgtatgagat
    10621 cacctggacc atcgtccagg aagagatcga ccacgactgg accacgcgcg cctaccgcac
    10681 cggggtgcag cgccagcgga acatctgggc caaggcccag gtctccacgt ggtggccctc
    10741 gctgaccatc tacgaggtga ccaacggcgt gagcgaatcg gtggcgcgcc tgaccgggcg
    10801 cacccgcagc cgcacgacct acaatcgtcc gttcgaccgc gccccctggg acgagacgaa
    10861 ctacaacgac gaccacgcca ccgccggccg ggaggactac gcggtcctgc tctcggaagc
    10921 caggaccgcc agcggggcca tcgtggccgg cgtgcgttat ctggtcgaat cgagcgacgt
    10981 cacctcggcc tgcagcatcg actacaacgg cgtgacctac agcaacggcc agacctttgt
    11041 gggtgtggcc agtgtgggca cgttcaccgt gttgaccggc acgcctctgg tctatccgcc
    11101 gggcagctat ctctggctcg atcgcggcgt cggcagcggg gtggatccgg acctgcacca
    11161 ggactgggac caggacgtga agctgcgcgg ccgcggcggc agcgtccaga tgcgcatccg
    11221 caaccagcaa ggccggtgtg tcaccaaatc catcggcctc tacagcgagc ccgccgacaa
    11281 gcggcccggc ggccgcacct gaaaacctat ggcactctca tttaccgtca cccgcggtta
    11341 ctcgttcccg gccggccggc cggtcaccct ggccgccctg cgcctggccg ccctgcctgg
    11401 cctggccttc acgggctccg tggccagcgg cgacatggcc gatggcgcag tcacgccggc
    11461 caaggcctcg cccggcgctt acttctacgg cgccgcctcg ggcaccaacg cctatgccgt
    11521 gacgctctcg cccgcgctgg gcgcctatgc caatggcgtg cagatcgtgg tgaagttcac
    11581 caacgccaac acgacggccg ccgcgcccac cctggacgtg aatctgctcg gcgccaaagg
    11641 catctaccat cgcagcggcc aggtgcccaa agcgggcgat ctgcaggcca acgagatttt
    11701 cgtgctggtc tacaacagca gccgcaacac cggcgccggc ggctgggata tcctgggcaa
    11761 agtgcccaat gacctggtcc gtgccggcac ctcgggcggc acgggcgcgg cctacacgtt
    11821 cacgaccgcc aacggtgcgg ccgccaccga cctggccgga ctgtccaacc aggtcctgct
    11881 ctggaaatgc tccacggcca acacgtccac cacgcccacg ctggccatcg atgggctcac
    11941 ggccaagacg atcgtcaagc gcacgggcgc cgccgtggcg ctgggcgact tggtccagga
    12001 cgccacctac atcctgctct acgacgccac gctggaccgc gtggtggtga tgaacatcgg
    12061 ccagggccga ccggaaatgg aagtggtggc tacggactcc ggcgccgcca acgcctacgc
    12121 catcgcgccc acgccggcct acacggcgtt gacggagctg cagaatcgat tcctcacctt
    12181 cctgccggcc aacaccaaca ccggcgcctc caccctggcc gtcagcggcc tgaccgccac
    12241 ggccatcacc aagtggggca gcgtgcctct gggccccggg gatctgcggg ccaaccggcc
    12301 cgccaccgtg ttctatgacg gcacgcgctt ccagctgacc ggctgcccgc cgccggccgc
    12361 gggcaaggcc tg
//
LOCUS       DASRPQ010001105         1107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2658225, whole genome shotgun sequence.
ACCESSION   DASRPQ010001105 DASRPQ010000000
VERSION     DASRPQ010001105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2658225"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..573)
                     /locus_tag="VFD73_12610"
     CDS             complement(<1..573)
                     /locus_tag="VFD73_12610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012881221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZI74837.1"
                     /translation="MPFKAHADRRHHIPKQQDRVTNWSEYDAALRQRGSLTVWFTEEA
                     IAAWRAEPRTTRGGQAHYSALAITTALTLRAVFRLVLRQTEGLIGSVIRLLGLDLAIP
                     DHSTLSRRAETLAVAGPPSSAEPVHLLVDSTGLKLSGAGEWLVEKHGTSRRRSWLKLH
                     IGVDADTGRIVAAALTTNDVDDGSQVGPLLE"
BASE COUNT          195 a          341 c          367 g          204 t
ORIGIN      
        1 ttcgagcaag ggaccgacct gcgagccgtc atcgacatca ttggtggtca acgccgccgc
       61 gacgatccgg ccggtgtcgg catcgacacc gatgtgcagt ttgagccacg accggcgccg
      121 gctcgtaccg tgcttctcga ctaaccattc gccggcgcca gacagcttca acccagtgct
      181 gtccaccaac agatgcacgg gttcggcgct ggacggcggt cccgccaccg ccagtgtctc
      241 ggcgcgccgg ctcagcgtgg aatggtcagg gatggcgaga tcgagaccga gcaggcggat
      301 gacggagccg atcagccctt cggtctgccg cagaaccaag cggaacacgg cgcgcagcgt
      361 cagcgccgtc gtgatcgcca gggccgaata gtgggcttga ccgccccgcg tggtccgtgg
      421 ttctgcgcgc caggccgcga tcgcctcttc ggtgaaccac accgtcaggc tgccacgctg
      481 gcgcagggca gcatcatatt ccgaccagtt cgttacccga tcctgctgct tcggaatgtg
      541 gtgacggcga tcggcatggg ccttgaatgg cacggcggac atctcagggg agttgtggat
      601 ggggggagca ccctcccatc tgggactgct cagccagatt tgccgcccgt agaggcttgg
      661 ggggagcgag caagctagac cagcgacccg ccaaatcccg ctcaccgaac ggagaatggt
      721 cctcaacgct acccggccta ggacgctcag cccaggtgat ccgtgcaaca aggtgtctcg
      781 ccacggaata agggaggtaa tacaactccc atccgcgcgt tatcaaatca cggacagtag
      841 gatcaagctg ctccctttcg tcggccactg ccgaagtttg acttgaggtg acctgttgtt
      901 gttctggttc gagtgcttgt tccacccgct tgggttcggg ggatttcggc agattgtctc
      961 ctgtctcagc aggaggtggt gctgccgttg aaaccgcagg cggttccgcc gggccggccg
     1021 ctgctcgggt atcagctggc ggcagtgaag ggggtaggag tgtcgacttc tcgggagcgg
     1081 taggaggtga cggctccgcc gctgccg
//
LOCUS       DASRPQ010001106         1241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3282131, whole genome shotgun sequence.
ACCESSION   DASRPQ010001106 DASRPQ010000000
VERSION     DASRPQ010001106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1241
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3282131"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..324
                     /locus_tag="VFD73_12615"
     CDS             <1..324
                     /locus_tag="VFD73_12615"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI74838.1"
                     /translation="DVCVSDYLMPGMNGIQFLTHTKQLQPEASRVLLTGHADKQSAIA
                     AINQAALFQYVEKPWDNAQLLLVIQSGAERAKLFRTLQSKISELDSAHSSLKDVQRRL
                     LKAFM"
     gene            complement(317..862)
                     /locus_tag="VFD73_12620"
     CDS             complement(317..862)
                     /locus_tag="VFD73_12620"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HZI74839.1"
                     /translation="MKTVHFDIDTQIDFMFPSGALYVPGAERLLPRIEQLNRYALDHG
                     LPLVSTMCAHSEDDPEFQQWPPHCIVGTIGQRKPDSLPAQIILEKQKLDLFTSPKLEP
                     LLAELKADRYVVYGVVTEYCVKCAALGLLKTGKPVTLITDAIQTLNPKDSEAMIQEFT
                     TRGGELQTVQNYCVPAPPPLT"
     gene            complement(859..>1241)
                     /locus_tag="VFD73_12625"
     CDS             complement(859..>1241)
                     /locus_tag="VFD73_12625"
                     /inference="COORDINATES: protein motif:HMM:NF037014.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74840.1"
                     /translation="DAPNLSATYKLAELDISGIKRFTAKLSEDKISLPGAKQVFRHPD
                     HDVVARSGECNLGRPLLRPILLGGELVEPLPDLETTRTYTAQSLRALPERLRQLEVGD
                     PHDVRLSKELKELVERTRENLRHV"
BASE COUNT          237 a          327 c          430 g          247 t
ORIGIN      
        1 gatgtgtgcg tctccgacta cctgatgccg ggcatgaacg ggatccagtt cctgacccac
       61 accaagcagc tccagccgga agcgagccgc gtgctgctga ccggccatgc cgataagcaa
      121 agcgccatcg ccgcaatcaa ccaggcggcc ctgttccaat atgtcgagaa gccctgggat
      181 aacgctcagc tgctgctggt gatacagagc ggcgcggagc gggcgaagct gttccggacg
      241 ttgcagtcga aaatctcgga gctggacagc gcgcattcca gtttgaagga tgtgcagaga
      301 agattgttga aggcgttcat gtgagcgggg gaggagcggg cacgcagtaa ttttgaactg
      361 tctgcaactc gcctccccga gttgtgaact cctggatcat ggcttcggag tccttcgggt
      421 tgagggtctg gatggcatcg gtaatcaggg tgaccggctt gcccgtcttg agcaggccca
      481 gggcggcgca ctttacgcag tactcggtga cgacgccgta gaccacgtaa cgatcggctt
      541 taagctcggc cagcagcggt tccagtttag gactggtaaa caggtccagc ttctgcttct
      601 ccagaatgat ctgcgccgga agcgagtcgg gcttccgctg gccgatggtg ccgacgatac
      661 agtgaggcgg ccattgttgg aattcagggt cgtcttcgga atgggcacac atggtggaga
      721 ccagcgggag cccgtggtcc agcgcatagc gattgagctg ctcgatcctg gggagaaggc
      781 gttcggcgcc ggggacatag agggcgccgg aaggaaacat gaaatcgatc tgggtatcga
      841 tgtcgaagtg aacggtcttc atacgtggcg caggttctct cgcgtgcgct cgaccagttc
      901 cttgagctct ttgctaaggc gcacgtcgtg aggatctccc acttccaatt gtcgcagacg
      961 ttcggggagg gcccggaggg attgggcggt ataggttcgg gtggtctcca gatcgggcaa
     1021 gggttcgacc aactcgccgc cgagcaggat agggcgaagc agggggcggc cgaggttgca
     1081 ctcgccggac cgggcgacca cgtcgtggtc agggtggcgg aagacctgct tggcgccggg
     1141 gaggctgatc ttgtcttcgc tcagcttggc ggtgaagcgc ttgatcccgc tgatatcgag
     1201 ctcggccagc ttgtaggtgg cggacagatt gggcgcatcg g
//
LOCUS       DASRPQ010001107         1619 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2658397, whole genome shotgun sequence.
ACCESSION   DASRPQ010001107 DASRPQ010000000
VERSION     DASRPQ010001107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2658397"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            223..>1619
                     /locus_tag="VFD73_12630"
     CDS             223..>1619
                     /locus_tag="VFD73_12630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74841.1"
                     /translation="MHQRVQYPDTIEPLVQFIEQTPPAEIIDRTLEKLRSGTPTKTML
                     TASALAVVRSADLPPGHHGGPLHPLAGLHAITNLVNRLEGEDKFMPVLQHVALSNKHI
                     NDPVTSPYSLLEFAPLDPSGAQVSRTADLANDGSGEEAATTEGIEAAKEAFLKACSRG
                     EALKADHIFLWLWDHVPAMEAFDLLMSVALPKNALDDHYFLFPGYLWRALETLGTEHL
                     KVLYRPAVRYVARFPAQRLVPEADALIEEHGLLNRILRQRSGEDETAKIGELGEAIRA
                     VKTYPDIPKMIAQALADGLSLEGAGEALSIGAAGLFLRSLTGNPMDVHLHTSANLRRY
                     LIRLDGFSMKNKLLTLLLWHTGPEVKSTQYRMEAELQPDAAAVAALPHQSQEDLLEAI
                     TQSIYTQPPTDWATVTNLGMMRAVPEVKHTVNLAQQYVNLRYDPQVLINRLAQIVCHD
                     NFTEMHAFKHHQAVI"
BASE COUNT          318 a          553 c          493 g          255 t
ORIGIN      
        1 caccatggct cacgggcgcc gcttccgcct aatggacggg gcggaaccgg ctaccccacg
       61 attgacacct cgacgatctc gtccgaccat gcaccagatc gcgaaagtaa acagatcctc
      121 gcgttgcctc ctccgcaggc agccgctggc ggagcgtggc aaggtgggac accaaccgcc
      181 gcctgcaccc gcgcagacgc aacgacgacg aggagtccac gaatgcatca acgcgtccaa
      241 tatccagata ccattgaacc tctggtccag ttcatcgagc agaccccacc cgccgagatt
      301 attgaccgca cactggagaa actacgctcc ggcacaccca ccaagaccat gctgaccgcc
      361 tccgcgctgg cggtggtccg ctcggctgat ctgcctcccg gccatcacgg cggtccgttg
      421 cacccgctgg ccggcctgca cgcgatcacc aatctggtga accgcctgga gggcgaggac
      481 aagttcatgc cggtcctcca gcacgtcgcg ctctccaaca agcacatcaa cgacccggtg
      541 acgtcgccgt acagcctgct ggagtttgcg ccgctcgatc cttcgggcgc acaggtaagt
      601 cgcactgcgg atcttgccaa cgatggctcg ggcgaggagg ctgccaccac cgagggcatc
      661 gaggcggcca aggaggcctt cctgaaggcg tgcagccgcg gtgaggcgct caaggcggac
      721 cacatcttcc tgtggctgtg ggatcacgtc cccgccatgg aggcgttcga cctgctgatg
      781 agcgtcgcgc tgccgaagaa tgcactggac gaccactatt tcctgttccc cggctatctc
      841 tggcgcgcgc tcgagacgct ggggacggaa cacctcaagg tcctgtaccg cccggcggtc
      901 cgctacgtcg cccgcttccc ggcccagcgt ctggtccccg aagccgatgc gctgatcgaa
      961 gagcacggtc tgctgaaccg gatcctgcgc cagcgcagcg gcgaggatga aacggcgaag
     1021 atcggcgaac tcggcgaagc gatccgggca gtcaagacct atcccgacat cccgaagatg
     1081 atcgcccagg cgctggccga cgggttgtcg ctggagggcg ccggcgaggc gctgtcgatc
     1141 ggcgcggcgg gcctattcct ccgctcgctc accggcaatc cgatggatgt gcacctgcac
     1201 accagcgcca acctgcgccg ctacctgatc cggctcgacg ggttcagcat gaagaacaag
     1261 ctgctgaccc tgctgctgtg gcacaccggg ccagaggtga agtcgactca gtaccgcatg
     1321 gaggcggagt tgcagccgga tgccgctgcg gttgccgcgc tgccgcacca gtcacaggag
     1381 gacctgctcg aggccatcac ccagagcatc tacacacagc cgccgaccga ctgggcgacg
     1441 gtgacgaatc ttgggatgat gcgggcggtg ccggaagtga aacacaccgt caatctggca
     1501 cagcagtatg tgaacctgcg ctacgatccg caggtgctga tcaaccggct ggcgcaaatt
     1561 gtctgccatg acaatttcac cgagatgcac gccttcaagc accaccaggc ggtgatcga
//
LOCUS       DASRPQ010001108         1388 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4531440, whole genome shotgun sequence.
ACCESSION   DASRPQ010001108 DASRPQ010000000
VERSION     DASRPQ010001108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1388
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4531440"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1121)
                     /locus_tag="VFD73_12635"
     CDS             complement(<1..1121)
                     /locus_tag="VFD73_12635"
                     /inference="COORDINATES: protein motif:HMM:NF006596.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HZI74842.1"
                     /translation="MRLTLCSLAMLFCFTPALRGQSADSRSLERDILKQLVEINTSDS
                     ARHTDQAAKAMQARLAEAGIPRQDMQIIETPPGINSLVVRYRGRSSAAKPILLMAHLD
                     VVGARREDWSFDPFTFREEGGYYYGRGSSDNKAGAAMLVATFIRYKKEGFVPDRDLII
                     ALTGDEETNGEAIQGLLDHHRDLVDAAFALNTDAGGGELRNGNPVTFAVQSAEKVYLS
                     FQLEVRNKGGHSSLPVPDNAIYRLSDGLVRLSHYTFPLKLNPTTREAFLKGAATQPAK
                     IAADMRAVAKNGDPAAARRLSAAEPYYNAQLRTTCVATRLFAGHADNALPQLARATVN
                     CRILPNDPPDSVAATLKRVLADTAIHLSQVRPPTLSPASP"
BASE COUNT          254 a          410 c          459 g          265 t
ORIGIN      
        1 ggggacgcag gactcaaggt cggcggccgc acttgagaca ggtgaatggc ggtatcggcg
       61 agtacccgtt tcagggtcgc cgcgaccgaa tccggtggat cattgggcag gatccggcag
      121 ttcactgtcg cacgagccaa ctggggcagg gcattatcgg cgtgtccggc aaacaatcgg
      181 gtggcgacac aggtggtgcg gagctgcgca ttgtagtagg gctccgccgc agagagccgc
      241 cgggctgccg caggatcgcc gttcttcgcc acagctcgca tgtcggccgc gatcttggca
      301 ggttgcgtag cggccccctt caggaaggcc tcccgggttg tcgggttgag cttgagcggg
      361 aaggtgtagt gcgacagccg gaccagacca tcgctcagac ggtaaatcgc gttgtccggc
      421 accggaagcg agctgtgacc gcctttgttc cggacctcca gctgaaagct gaggtagacc
      481 ttctcggccg attgcacggc aaaggtgacc ggattcccgt ttcgcagctc gccacccccg
      541 gcatcggtat tcagcgcgaa agcggcgtcg accagatctc ggtgatgatc cagaagcccc
      601 tgaattgcct cgccgttggt ctcctcgtca ccggtgagcg cgatgataag gtcgcggtcc
      661 gggacgaacc cttccttctt gtaacggatg aaggtggcga ccagcatcgc ggcacccgct
      721 ttgttgtcgc tgctaccacg gccatagtag tagcccccct cttcccggaa ggtgaacgga
      781 tcgaaggacc agtcctctcg gcgtgcgccg acgacgtcga gatgggccat cagcaggatc
      841 ggctttgccg cgctgctccg accccggtag cgcaccacca ggctgttgat gccaggcggc
      901 gtctcgatga tctgcatgtc ctggcgggga attccggcct cggccaatcg ggcctgcatc
      961 gccttggcgg cctgatcggt atgtcgggcc gagtcgctcg tgttgatctc gaccagttgc
     1021 ttcaggatgt cccgctcgag cgagcgggag tctgcgctct ggcctcgaag agcaggggtg
     1081 aaacagaaca gcatcgcaag ggagcaaaga gtgaggcgca ttatcgtctg gatgaagatg
     1141 gatgcacgat gtgactgcag tggggtgcac cggacgaatt tgtacgggcc gaaccatcgg
     1201 agcaactcga gggcggatcg cgtggggcct tgcgaaaacg ctgatcgcgg tccagcgtag
     1261 tagggccccc tcatctcgaa actatcccct gaggatgtga tggttagacc acaccgggtc
     1321 tggataccgg ttctctgcgc tagtgctctg ctcgtcactg cctgccagaa tgaatccgaa
     1381 gcgccacc
//
LOCUS       DASRPQ010001109         1388 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3282442, whole genome shotgun sequence.
ACCESSION   DASRPQ010001109 DASRPQ010000000
VERSION     DASRPQ010001109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1388
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3282442"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..698
                     /locus_tag="VFD73_12640"
     CDS             <1..698
                     /locus_tag="VFD73_12640"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZI74843.1"
                     /translation="SRLRVTLVEAGPRILPALPTDLAEAAHQELEALGVRVLVNTAIT
                     EVTAAGMVTRTGEMIQADLKVWAAGVRASEVLREIAGLETTRSNQLVVRPTLQTTRDD
                     RIFAIGDCCYLKPEGSERPVPPRAQAAHQMARVAYRNILHLIAHKPLGTFVYRDHGSL
                     VSLSRYSTVGSLMGNLVGGRMAVEGRIARMVYLSLYRMHLIGVHGWLKGMTLILVGHV
                     NRVVIPTAGEHFH"
     gene            725..>1388
                     /locus_tag="VFD73_12645"
     CDS             725..>1388
                     /locus_tag="VFD73_12645"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI74844.1"
                     /translation="MGSKVYLIDHLNADELYQRYREEQDPIKRTHLQILWLLTSGRPA
                     KVAAEMTGYSQRWISVLVGRYNEAGVDGLGDLRRFNPGSRPLLDAEKRERLDRALDHP
                     PPDGGLWTGWRVAQWMCGRLGRLVSPRRGREYLRRLGFTRQVPRPRHAQGDFAAQERF
                     KADFRARMEDLAREDPDRAVEVWAFDEHRAGLKPVIRKVWARRGQRPLARGHQRFQWV
                     YVF"
BASE COUNT          248 a          418 c          459 g          263 t
ORIGIN      
        1 agagccgctt gcgcgtgacg ctcgtcgagg ctggaccgcg tatcttgcct gctctgccca
       61 cggacctggc cgaggctgcc caccaagaat tggaggcgct tggtgtaagg gtgctcgtca
      121 acacagcgat cacggaggtt accgcggccg gcatggtgac tcgcacaggc gagatgatcc
      181 aagctgacct gaaagtctgg gcggctggcg tgcgggcatc ggaggtcctg agggagatcg
      241 ccggtctgga gacgacccgc agtaatcagc tcgtcgtccg cccgacactc caaaccaccc
      301 gagatgatcg cattttcgcc attggtgatt gctgctacct caagccggaa ggctccgaga
      361 ggccggtacc gccgcgcgct caggcggccc accagatggc ccgggtagcc tatcgcaaca
      421 ttcttcacct gatagcccat aagccgctgg ggactttcgt ctaccgcgat catgggtcgc
      481 tcgtgtccct cagccgttac tcgacggttg gcagtctgat gggcaacctg gtaggcggcc
      541 gcatggcggt tgaggggcgg atcgcccgta tggtctacct gtcactctac cgaatgcatt
      601 tgataggcgt ccacggatgg ctgaaaggaa tgactctcat tctggtcggg cacgtgaacc
      661 gtgttgttat accaacggcg ggtgaacact tccattgaat gaaattggtt cccatttatc
      721 gaagatggga agcaaggttt atctgattga ccatcttaac gccgatgagc tgtatcaacg
      781 gtatcgggaa gaacaagacc cgatcaagcg gacgcatctt caaatcctct ggctgctgac
      841 gagcggacgg cctgcgaagg tcgcggccga gatgaccggg tactcgcaac gctggatcag
      901 tgttctggtc ggacggtaca acgaggccgg ggttgacggg ctgggcgatc tgcgccgctt
      961 caaccccggc tccagaccgc tgctcgacgc tgaaaaacgg gagcgtcttg accgcgccct
     1021 tgatcaccca cccccggatg gcgggctgtg gaccggctgg cgggtcgcgc agtggatgtg
     1081 cggtcggctc ggccgcctgg tttcgccgcg gcgggggcgg gagtacctac ggcgtctggg
     1141 gttcacccgg caggtgccgc ggccgcgcca cgcacaaggc gactttgccg ctcaggagcg
     1201 gttcaaggcc gacttccgcg cccgcatgga agacctggcg cgcgaggatc cggaccgggc
     1261 ggtcgaggtg tgggccttcg atgaacatcg cgccggcctc aagccggtca tccgcaaagt
     1321 ttgggcgcgc cggggtcagc gcccgctggc ccgcggccac cagcgctttc aatgggttta
     1381 tgtcttcg
//
LOCUS       DASRPQ010001110         2816 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3587045, whole genome shotgun sequence.
ACCESSION   DASRPQ010001110 DASRPQ010000000
VERSION     DASRPQ010001110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2816
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3587045"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VFD73_12650"
     CDS             <1..186
                     /locus_tag="VFD73_12650"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhjD/YihY/BrkB family envelope integrity
                     protein"
                     /protein_id="HZI74845.1"
                     /translation="STYGAAGSVIVVLVWVYYSAQIILLGAEFTRAYVGQFGRRPPAE
                     DFAMKDTAKKQTSPEGR"
     gene            complement(215..814)
                     /locus_tag="VFD73_12655"
     CDS             complement(215..814)
                     /locus_tag="VFD73_12655"
                     /inference="COORDINATES: protein motif:HMM:TIGR00730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HZI74846.1"
                     /translation="MSAPLQLNRICVFCGTNPGSRPAYGAAARELGRILADEDIELVY
                     GGASVGIMGELADSVQEHGGHVTGIIPQQLVEKEAAHTGIPNLIVVASMHQRKSQMAD
                     LSDGFIALPGGIGTMEGFFEVLTWAQLGIHAKPSGILNIEGYFDSLIGFLDHAVAEGF
                     LTDIHRHAIMVESDPRTLLDRMRAYTAPEGEKLMGRTHR"
     gene            932..1918
                     /locus_tag="VFD73_12660"
     CDS             932..1918
                     /locus_tag="VFD73_12660"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HZI74847.1"
                     /translation="MEHRNLGRNGLSVSALGLGCMGMSDFYAGRNDDESIATIHRAID
                     LGIDFLDTADIYGPYTNERLVGRAIRGRRDEVILATKFGNQRGEDGSWLGVNGRPEYV
                     RKSCDGSLQRLGVDHIDLYYQHRVDRTVPIEETVGAMADLVRQGKVRFLGLSEAAPET
                     IRRANREYAIAALQTEYSLWTRDPEDEILPLCRELGIGFVAYSPLGRGFLTGRFRKFD
                     DLPEDDYRRNSPRFQGENFQRNLDLVERVEELARRKKCTPAQLALAWLLAQGDDIVPI
                     PGTKQRRYLEQNVAALGVDLTAGDLEEIDEVAPKGVAAGGRYPEAGMRTVNG"
     gene            complement(1926..2372)
                     /locus_tag="VFD73_12665"
     CDS             complement(1926..2372)
                     /locus_tag="VFD73_12665"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HZI74848.1"
                     /translation="MRVRDVMTPDPACCTPNSTAREAAVLMRDNDCGSLPVVESESSR
                     RLVGTVTDRDLAIRGLAEGKGPDTMIGDLMTNGPTTAGPEDEVEVVRDVMIAQQVRRV
                     PVVDDDGMVVGIVAQADIAREEGAASDQEVGRIVEAISDPRPDLEE"
     gene            2486..>2816
                     /locus_tag="VFD73_12670"
     CDS             2486..>2816
                     /locus_tag="VFD73_12670"
                     /inference="COORDINATES: protein motif:HMM:NF018942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HZI74849.1"
                     /translation="MTELRLPASVLQGILARAALVFLRFYLGVIFLIAGVPKLQEDFA
                     IRLAGFLRSVALTKGYVFYQEFAGQELLPHVRLLAGFVSWAEVLVGAALILGLATRLV
                     SALAIVLL"
BASE COUNT          514 a          880 c          855 g          567 t
ORIGIN      
        1 tccacctatg gggcggcggg gtcggtcatc gtcgttctag tctgggtgta ctactcggcg
       61 cagatcattt tactgggggc ggagtttacc cgggcctatg tagggcagtt tggcaggcgg
      121 ccaccggcgg aggactttgc catgaaagac accgcgaaga agcaaacctc gccggaaggc
      181 aggtaacgag aagatccgag tcttcagcga cgctctatct gtgcgtcctg cccatcagct
      241 tctctccctc cggagcggta tacgcccgca tccggtcaag cagggtccga gggtcactct
      301 cgaccataat cgcgtggcgg tggatatcgg tcagaaatcc ctctgccact gcgtgatcca
      361 ggaagccgat gagcgaatcg aagtagccct cgatattgag gattcccgat ggcttggcat
      421 ggatcccgag ctgagcccag gtgagcacct cgaagaatcc ctccatggtt ccgatcccgc
      481 cgggaagcgc gatgaatccg tcggagagat cggccatctg ggacttccgc tgatgcatcg
      541 acgcgaccac gatgaggttc gggattccag tatgggcggc ctccttctcc actagctgct
      601 gcggaatgat tccagtcacg tgaccgccgt gttcctgcac cgaatcggcc agctcgccca
      661 taatgccgac gctggctccc ccatagacca gctcgatgtc ctcgtcggcc agaatccgcc
      721 cgagctcacg agccgcggct ccgtatgccg gccgggagcc gggattggtc ccacaaaaca
      781 cgcagattcg gttgagctga agaggggctg acatacgtaa tagactctcc ccttggccga
      841 ccaaagtcta gaggctggca ccttgccccg gctcgattag actcagctga gacgaactcg
      901 gatgactcgc gaccctcggc gaggagtgac aatggaacat cgtaacctcg gacgcaatgg
      961 cctcagcgtc tctgcacttg gcctcgggtg catgggaatg tccgatttct atgccggaag
     1021 aaatgatgat gagtccatcg cgacgattca tcgggcgata gacctgggaa tcgacttttt
     1081 ggacacggcc gacatctatg gtccatacac caacgagcgt ctggtgggac gcgccattcg
     1141 gggccgtcgc gacgaggtca ttctggcaac aaagttcggc aatcaacgcg gcgaggacgg
     1201 cagctggctc ggagtgaacg ggcgcccgga gtacgtccgg aagtcatgcg atggttcact
     1261 gcagcggctc ggcgtggatc acatcgatct ctactaccaa catcgcgtgg accggacggt
     1321 gcccatcgag gagaccgtcg gcgccatggc cgatctggtg cggcaaggca aggttcggtt
     1381 cctgggctta tcggaggcgg caccggaaac gatcagacga gccaaccggg aatacgccat
     1441 tgccgctctg cagaccgagt attcgctgtg gacccgggat ccagaggacg aaattctgcc
     1501 tctctgtcgt gagctgggca tcggattcgt ggcctactcg cccttgggac gtggatttct
     1561 gacggggcgt ttccgcaaat tcgacgacct tcccgaggac gactaccggc gcaactcacc
     1621 ccgctttcag ggagagaact tccagcggaa tctcgacctc gtcgagcggg tcgaagagct
     1681 tgcccgacgg aagaagtgta cgcctgcgca gctggcgctg gcctggctgc tggcacaagg
     1741 cgacgacatt gtgcctatac cagggaccaa acagcgccgc tatttggagc agaatgtggc
     1801 cgcgcttggg gtagacctca ccgcgggcga cctcgaggag atcgatgagg tcgcccccaa
     1861 gggtgtggct gccggcggtc gctaccccga agccggcatg cgcacggtaa acgggtaggc
     1921 tttacctact cttccagatc cggtctgggg tcggagattg cctccacgat ccgcccgacc
     1981 tcctgatcgc tggccgctcc ctcctcccgg gcgatgtctg cctgggccac gattcctacc
     2041 accattccat cgtcatccac gaccggaacc cgccggacct gctgcgctat catgacatcc
     2101 cggacgactt ccacctcatc ctctggcccc gcggtggtgg ggccattcgt catcaagtcg
     2161 ccgatcatgg tatcaggccc ttttccttcc gccagcccgc ggatagcgag gtcgcggtcg
     2221 gtgacggttc ccaccagccg tcggctgctc tcgctctcca ccactggtag agagccacaa
     2281 tcattgtctc gcatgaggac cgctgcctcg cgcgcggtcg aattcggggt gcagcaggct
     2341 gggtcgggcg tcatcacgtc acgtactctc acggctcccc ctggaaagtg ttggcccaag
     2401 atccacctcg ctcgcgggtc gcgcggtgac ctgcgtaact ttccgcgcct atggccctga
     2461 gccagtgtcc cccacctcgt cccctatgac cgagctaaga ctccccgcct ctgtgctgca
     2521 ggggattctc gcccgagccg ccctcgtctt cctacgcttt tacctgggag tgatctttct
     2581 gatcgccggt gtccccaagc ttcaggaaga ttttgcgatc aggcttgccg gatttctccg
     2641 cagcgttgct ctcaccaagg ggtatgtgtt ctatcaggag ttcgcggggc aggaactgtt
     2701 gccccacgtg cgtctgttgg ccggattcgt cagctgggcg gaggtcctgg tgggcgccgc
     2761 actgattctg ggattggcaa cccgcttggt gtcggcgctg gcaatcgtgt tactgg
//
LOCUS       DASRPQ010001111         2593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2951661, whole genome shotgun sequence.
ACCESSION   DASRPQ010001111 DASRPQ010000000
VERSION     DASRPQ010001111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2593
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2951661"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1077)
                     /locus_tag="VFD73_12675"
     CDS             complement(<1..1077)
                     /locus_tag="VFD73_12675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74850.1"
                     /translation="MRRQAARFLFVFVVGTVAMVLGVVTSMTLTPPGRDLLARTVSRM
                     LDRIVTGSVRVGAISGSFIYDLTLENLVVRDTSGALLADLPRAKVSYRLPNLIAGQVV
                     LSGLQLERPTIQLIKHRSGRMNYEEVLGIGKGSKGGTSPLVLFRNVRMSGGTLRIALP
                     WNPPKSVVTEVSLDSALRAERAKPGRTIEQSPEGLRRVILLSDLSTRISQLQIATPDR
                     KPFTIDLDSLATRVNDPGVTVRDAAGRIRIRGDSAVFSLSHAGLPDTRFSGGGAVTWP
                     RDTILFDFQVISPHVNLEDLRWVSPNFPSMTGRGVLAARSETGARTAYDIRDLHLRGM
                     LGQVDGDLVTITDKRRGLGVRDMNV"
     gene            complement(1077..>2593)
                     /locus_tag="VFD73_12680"
     CDS             complement(1077..>2593)
                     /locus_tag="VFD73_12680"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HZI74851.1"
                     /translation="TATVTLETEPDGRAVIGDITVVGAHRVDSVVVRKLLVSHTGRRF
                     SQEELFESQRNLYESDLFRFATVNIDSSRYRPGTDSVPLLVQVNESKPRRIRGGLGYA
                     TYDCFRASLGWTSRNFLGAGRILDLTSQVSKVGVGSPVDWGLDQNICSASRDDSVGSA
                     KVNFYLGASLRRPAFLSPNNAITLSVFGQRRSEFKVYLRQETGVSVAFTRTTPRRRNP
                     LSLTYTLSYGRTEATAVSFCSVFGACTPDVTGPLRQNLVLATLTALGTFPRVNSPIDP
                     TRGSNASVEVTYSSKYIGSSSLQQFTRVVGGMSWYRPLSRDVVLSWRVRGGLIFSPTL
                     DVANVSGAFIPPDQRFYAGGPNDVRGFERNELGPVIYVVPVGFANDRDSVRVAATGGN
                     TLALGNVELRLPSPVFSSRLRLATFVDAGGVWERQGPQQNRVIRVTPGVGIRIATPLG
                     PARVDAAYNPYKLQGGQLFEADTLGNLTPVPGASSYVLARDRKWTFHFAVGQAF"
BASE COUNT          500 a          819 c          832 g          442 t
ORIGIN      
        1 aacattcatg tcccgcaccc cgaggccccg ccgtttgtcg gtgatggtca cgaggtcacc
       61 gtctacctgg cccagcatgc ctcgaaggtg caggtctctg atgtcgtatg ccgtgcgggc
      121 cccggtttcg gagcgcgccg cgagcactcc ccgcccagtc atcgagggaa agttgggcga
      181 cacccaccgc aggtcttcca gattcacatg gggcgagatg acctggaaat cgaataggat
      241 ggtgtcgcgg ggccaggtga cggcaccgcc tccggagaat cttgtatccg gtaacccggc
      301 gtgcgagaga ctgaagacgg cactatcgcc tcgaatcctg atccggccgg ctgcatcacg
      361 gacggtaacg ccaggatcgt tgactcgggt ggccagagaa tccaggtcga tggtgaaggg
      421 cttgcgatcg ggcgtcgcga tctggagctg agagattcgg gtggacagat cggacaggag
      481 aatgacacgc cgcagtcctt cgggactctg ttcgatggtc cttcccggct tggctcgctc
      541 cgcgcgcagc gctgaatcga ggctgacctc ggtcaccacg gacttgggcg gattccaggg
      601 cagcgcgatc cgaagcgtgc cgcccgacat ccgcacgttg cgaaagagta ccagcggtga
      661 ggtcccgccc ttggagcctt ttccgatccc cagcacctcc tcgtaattca tccggccgct
      721 gcggtgtttt atcagctgaa tggtcggtcg ctcgagctgc aatccgctca acaccacctg
      781 tccagcgata aggttgggga gccggtagct caccttggcg cggggcagat cggccagcag
      841 cgccccgctg gtatcgcgga cgaccagatt ttccagggtc aggtcgtaga tgaacgagcc
      901 ggagatggca ccgaccctga ccgaaccggt cacgattcga tcgagcattc gagagacggt
      961 gcgggccagc aggtctcgcc cgggcggcgt gagcgtcatc gaggtcacga cgcccaatac
     1021 cattgccacg gtgccgacca cgaagacgaa gagaaaccgt gcggcctggc ggcgcatcag
     1081 aaggcttgcc ccacggcgaa atggaacgtc cacttacgat cgcgggcgag aacgtaggag
     1141 ctcgcacctg gcaccggcgt gagattgccc agcgtgtctg cctcgaacaa ctggcctccc
     1201 tgcagcttgt acggattgta ggctgcgtcc acgcgggccg gtccaagcgg tgttgcgatg
     1261 cgaatgccca cgccaggtgt cactcggatc actcgattct gctgcgggcc ctggcgctcc
     1321 cacactccgc ccgcatcgac aaacgtggcc agccggagtc gggagctgaa cacgggtgag
     1381 ggcaaccgaa gctcgacatt tccgagcgcc agggtgttgc caccggtcgc ggcgacccgg
     1441 acggaatccc gatcgttggc aaacccgacc ggcaccacgt agatgacggg gcccagctca
     1501 ttccgttcga acccgcggac gtcgttggga cctccggcat agaatcgctg atccggcggg
     1561 ataaacgcgc cagatacgtt ggccacgtcc agtgtgggcg aaaaaatgag gcccccccgc
     1621 actcgccagc tgaggaccac gtctcggctg agcggccggt accacgacat gccgccgacc
     1681 actcgggtga actgctgcag gctggacgag ccgatgtatt tcgagctgta ggtcacctcg
     1741 accgaggcgt tcgacccgcg agtcgggtcg atcggactgt ttacccgggg aaaagttccc
     1801 agtgctgtca gcgtggcgag caccagattc tgccgcagtg gtccggtgac gtcgggcgtg
     1861 catgccccga aaaccgaaca gaagctcact gcggttgctt cggtccggcc gtaggacagg
     1921 gtgtacgtca aggagagagg attccggcgg cggggggtcg tccgggtgaa cgcgacgctg
     1981 actccggtct cctgccgaag gtacaccttg aactccgagc gtcgctggcc aaacaccgag
     2041 agtgtgatgg cgttgttggg cgacagaaag gctggccgcc ggagcgacgc tccgagatag
     2101 aagtttacct tggccgagcc gaccgagtcg tcccgcgaag cgctgcagat gttttggtcc
     2161 agaccccagt cgaccggtga acccacgccg actttcgaaa cctggctggt gagatccagg
     2221 atccggccgg cgcccagaaa attccgggac gtccatccca gcgatgcccg aaagcagtca
     2281 taggtggcat atcccagccc accacggatg cgccgcggtt tactctcgtt cacctgcacc
     2341 agcaggggca ccgagtcggt accaggccgg taccggctgg aatcgatatt caccgtggcg
     2401 aagcggaaca gatcggactc gtacagattg cgctggctct cgaacaactc ctcctgcgag
     2461 aatcggcggc cggtatgcga gaccagcagc ttgcgaacca ccacggaatc aacccggtgt
     2521 gctcccacca cggtaatgtc cccaatgacg gcgcgcccgt cgggctcggt ctccagcgtc
     2581 accgtggccg ttc
//
LOCUS       DASRPQ010001112         1008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4531613, whole genome shotgun sequence.
ACCESSION   DASRPQ010001112 DASRPQ010000000
VERSION     DASRPQ010001112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4531613"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..878
                     /locus_tag="VFD73_12685"
     CDS             141..878
                     /locus_tag="VFD73_12685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74852.1"
                     /translation="MTALNLPSERELAALAAQADGLAPGDLQSVYAGLTGAAKLRAAG
                     DGLFWLRFVLTRDEADAGASVKPFPLHLEYLRALWDVLDTRQCVVIAKSRQMLVSWCV
                     AAFAVWWARHKDNQAIYWQSQKDRDSINMVCLPKGAAMGRCQFIEANLPPWMRINIPP
                     VEGRLNYPNGSFIQALPGGAAQIRSNVPSLYIGDEFAFQEEQKGVWTAVAPLIQKGAK
                     AFLISTPNGSANQFAELWHGRPVGDAA"
BASE COUNT          183 a          334 c          313 g          178 t
ORIGIN      
        1 ctccttattg cccagctcac cggaacccag ctgccagcat aagttctacc ccatgcatca
       61 ctatgggaat cccgatggga aggactatgg ccccacgggg tttctgattt gcgaagagtg
      121 tgccgagatc gtagacgagg atgactgccc taaaccttcc ctcggagcgt gagcttgcgg
      181 cactggctgc ccaggctgat ggactggctc ccggagacct tcagtctgtc tatgccggcc
      241 tcacaggagc cgctaagctt cgagcggcgg gggacggcct gttctggctg cgctttgtgc
      301 tcacgaggga cgaggccgac gccggagcct ccgtcaagcc ctttccccta cacctggagt
      361 atctccgggc cctctgggac gtccttgata cgcggcagtg tgtggtcatt gccaagtccc
      421 gacagatgct cgtctcctgg tgcgtcgcgg cctttgccgt ctggtgggcg cgccacaagg
      481 acaaccaggc gatctactgg cagtcgcaaa aggaccggga ctcgataaac atggtctgcc
      541 tcccgaaggg cgcggcgatg ggccgctgcc agttcatcga ggcgaacctg cccccctgga
      601 tgcggatcaa cattcccccc gtcgaggggc gcctgaacta cccgaacggc agcttcatcc
      661 aggccctccc cggcggtgcc gcgcagatcc gcagcaacgt cccctcgttg tacatcgggg
      721 acgagttcgc gttccaggag gagcagaagg gcgtctggac cgccgtcgct ccgctgatcc
      781 agaagggagc caaagccttc ctgatcagca ccccgaacgg cagcgcgaac cagttcgccg
      841 aactctggca cgggaggcca gtaggcgatg ccgcttaagg ggttctccgc cgccgagaac
      901 gaactcggga tgaccgccgt ccggatccac tactccgcgg accccgcgaa ggacgccgag
      961 tggctggagc gcacgcgccg gttgtacccg gatccgaatg cgttccag
//
LOCUS       DASRPQ010001113         1411 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1071174, whole genome shotgun sequence.
ACCESSION   DASRPQ010001113 DASRPQ010000000
VERSION     DASRPQ010001113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1411
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1071174"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(214..1020)
                     /locus_tag="VFD73_12690"
     CDS             complement(214..1020)
                     /locus_tag="VFD73_12690"
                     /inference="COORDINATES: protein motif:HMM:NF024752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZI74853.1"
                     /translation="MLDVPRELIWFVSGLLASHRREIGTRKGSRRLGCYKQALFALAW
                     FRDKGDIRRLGAGFGLSQSTAYRYLDEVIEVLAARAPGLQEQLERALAEGAPYLILDG
                     KVVDTDRCREKTLSRKGEAIDLWYAGKTHDFGGNIQALFYPSGIPLWVSDVLPGNVHD
                     LAAARENVLGALRPFCDAMPVLADPGYEGAGHGVHVPVKKPAGVKELDVDTRARNALI
                     RSVRCLDERGFALLTQRWKTLQHVTASPGRIGLIARAAFVLVLFEHKMLT"
BASE COUNT          254 a          484 c          419 g          254 t
ORIGIN      
        1 gaaggccagg acccggtccg tttcaagcac cgtggtggcg gggatttccc cggccacgat
       61 ggcgcagaac aagcattcag ccacaggaag atcctagagc cttccgggcg cgcttatggc
      121 tcatccttcg gcctgctcgc aaccccccgc agcggtcccg gcaatacctg catgggcata
      181 attacggcta tattgacgtt ttcccaacga ctttcacgtg agcatcttgt gctcgaatag
      241 caccaggacg aacgcggcgc gggcgatgag gccgatcctg cccgggctgg cagtgacatg
      301 ctggagcgtt ttccaccgct gggtcagcag cgcgaagccg cgctcgtcca ggcagcgcac
      361 cgagcggatc agcgcgttgc gcgcccgggt atcaacgtcg agctccttga ccccggcagg
      421 cttcttcacc gggacatgaa cgccgtgacc agcgccttcg tagccgggat cggccagcac
      481 cggcatggca tcgcagaacg gccgcagcgc gcccaggacg ttctcccggg ccgcggccag
      541 gtcatgaacg ttgcccggca gcacatcgga gacccacagc gggatccctg acggatagaa
      601 cagcgcctgg atgttcccgc cgaaatcatg ggtcttcccc gcataccaca agtcgatggc
      661 ctcgccctta cggctgaggg tcttctcccg gcaccggtcc gtgtccacga ccttgccgtc
      721 caggatcagg tacggcgcgc cctccgccag cgcccgttcc agctgctcct gcagccctgg
      781 cgcgcgggcc gccaggacct cgatcacctc atcaaggtac cggtacgccg tggactgcga
      841 cagcccgaag ccggcgccca gccgcctgat atcgcccttg tcccggaacc acgccagcgc
      901 gaacagcgcc tgcttatagc agcccagcct gcggcttccc ttccgcgtgc cgatctcgcg
      961 ccggtgactg gccagcagcc cggaaacgaa ccagatcagc tccctgggca cgtcgagcat
     1021 gacacgatag gagaccacgc ggagcctctc cccggtagcg ggtgatcttt ggcgagactt
     1081 cttctaccgg gggctccgcg ccttcccggc gatctccgca tatgcccgcg tgtctacccg
     1141 gacgtcccgc tgcatcacgt ttgcccgact cgcccttgct gggaaaacgt cattgtcact
     1201 taattcggag cgcgcaagac tgcgtcggcc atgggtgtgt gccgcaaccc attttcgtgc
     1261 ccgctaaagt tcgtctggcg ggactactgc gagaatcggt acgtaacgca atgccgttca
     1321 attaagcggc gggatggagc agccgtatcg tcggcggtga actgtacaca atattcttat
     1381 ctccgggttg cttcacgaaa taagagttgg g
//
LOCUS       DASRPQ010001114         3405 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3587375, whole genome shotgun sequence.
ACCESSION   DASRPQ010001114 DASRPQ010000000
VERSION     DASRPQ010001114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3405
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3587375"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..512
                     /locus_tag="VFD73_12695"
     CDS             <1..512
                     /locus_tag="VFD73_12695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74854.1"
                     /translation="DAKHPKEIAFFDRGPVDANEMKSGGYWSTYWYNGVIVGSEISRG
                     LDIFELTPSGFISPNEIEAAKSVKLDYFNVQSQPKFTWPATYSLARAYLDQLERDNGM
                     DAAKIADARAELTKAEHASGSKQQLALNELVSRLEKDVSSAHDTAKAQTLANTVRQLA
                     ASQDLARAK"
     gene            643..2646
                     /locus_tag="VFD73_12700"
     CDS             643..2646
                     /locus_tag="VFD73_12700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74855.1"
                     /translation="MVHRTLAFVSGAAAILLVACTHSGSNEAAGAPTPAASNSTTPPS
                     PDPRIGLKAGATDAGEAIWNLKKVSSTPPSKPFIDGINSDLAFTGHYVIQGSFNGYQV
                     WDVANAGKPRLETAYVCPGSQSDVSVYKNLLFVSGENLAARLDCGTQGVEDTVSKERL
                     RGLRIFDISDIAHPKNIGNVQTCRGSHTHTLLVDPKDQENVYIYISGQAPVRSPSELA
                     GCVIAPKDPNTALFRIEVIKVPLAHPEQARIVSSPRIFNDLVAPKTHPDTPEDSIEAA
                     KEVADAKAHGGFVGVFHGKEEVINPGWVKELLDSVVKARGGTGNPTAADSSTLRQALP
                     RIVDAAVKAEEAQEPDSTAGPTQCHDITVYPAIGLAGGACAGYGLLLDIRNPAQPVRV
                     DAVSDSNFSYWHSATFNNAGTKLLFSDEWGGGVQPKCRPTDKKEWGADAIFRLGGTKL
                     QFQSYYKMPAPQTPEENCVAHNGSLIPIPGRDVMVQAWYQGGVSVFDWTDAKHPKEIA
                     YFDRGPLDATKLELGGYWSAYWYNGFIYGSEITRGLDAFELKPSGFLTQNEIDAAKSV
                     KLDYFNTQSQVKFTWPASYSLARAYLDQLERSHGLEQSKINDARAELAKAEKSAGSRK
                     DSVLAQLVSRLEANVNGSGDAAKVRLLAGTVRQLSASSELARR"
     gene            complement(2678..2947)
                     /locus_tag="VFD73_12705"
     CDS             complement(2678..2947)
                     /locus_tag="VFD73_12705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74856.1"
                     /translation="MSRSIYLRTSSGSEHGMPFKSRAQRRKFAELLVKGKISPQTFEE
                     WNRETGSAMLPEHVSKSSKRAKPKRTKKKTAAKASKRNVKRKGRS"
     gene            complement(2916..3074)
                     /locus_tag="VFD73_12710"
     CDS             complement(2916..3074)
                     /locus_tag="VFD73_12710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74857.1"
                     /translation="MPKRNYGFEKRQKELNRQQKQEAKRQRRLERNDTPPEQEKPEGE
                     PLDLPSDE"
     gene            complement(3099..>3405)
                     /locus_tag="VFD73_12715"
     CDS             complement(3099..>3405)
                     /locus_tag="VFD73_12715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74858.1"
                     /translation="LSRQQESRLPVISHTALIERANHKDLHSVEVQVTTQGTGGGRPF
                     WTGTFMSRSVDGFMPDERLALTLDNGMKVTARVSETFYDSRTPEATRIQITGTSPLA"
BASE COUNT          659 a         1037 c         1047 g          662 t
ORIGIN      
        1 ccgacgcgaa gcacccgaag gagatcgcgt tcttcgatcg cgggccggtg gacgccaacg
       61 agatgaagag cggcgggtac tggtctacct attggtacaa tggggtgatt gtcgggtcag
      121 agatctcgcg cggactggat atcttcgagc tcacgccgag cggcttcatc tctcccaatg
      181 agatcgaggc agccaagtcg gtcaagctcg actacttcaa cgtgcagagc cagcccaagt
      241 tcacctggcc ggctacctac tcgctggcgc gcgcctactt ggaccagctc gagcgggaca
      301 acgggatgga tgcggccaag atcgccgatg cccgggccga gctgaccaag gcggagcacg
      361 cctcaggcag caagcagcaa ctcgctctga acgagctggt cagtcgtctg gagaaggatg
      421 taagcagcgc acacgacacg gcaaaggcgc agacgctggc gaacacggtg aggcagctcg
      481 ccgcctcaca ggacctggcc cgggccaagt agaggcgtac ccacgtcatc ctgagcgagg
      541 cggaggaggt tcctcgctgc gctcgggatg aggtgagtgg ttggtggaga cattgtgatt
      601 ttcacgttat tggccgattc gcaccctctg aggaattctg gcatggtaca ccgcaccctc
      661 gccttcgttt caggcgctgc cgccatcctt ctcgtggcat gcacccattc gggttccaat
      721 gaggcagcag gggcaccgac acctgcggcc agcaattcga caacccctcc gagtcccgac
      781 ccccgcatcg ggttaaaggc cggtgccacc gatgccggcg aggcaatctg gaatctgaag
      841 aaggtttcca gcactccgcc gtcaaagccg ttcattgatg ggatcaattc cgacctggcc
      901 tttaccggac actacgtcat tcagggcagc ttcaacggct accaggtctg ggacgtggcc
      961 aatgccggca agccgaggtt ggagacggca tacgtttgcc ccggctcgca gagtgatgtg
     1021 tcggtctaca agaacctgct gttcgtgtcg ggtgaaaacc tcgctgcgcg gctcgactgc
     1081 ggcacgcagg gtgtcgagga cacagtgagc aaggagcggc tgcgcgggct ccggatcttc
     1141 gacatcagcg acattgccca ccccaagaac atcggcaatg tccagacctg ccgtggctcc
     1201 catactcaca cgctgctggt tgatcccaag gaccaggaga acgtctacat ctatatctcg
     1261 gggcaggcac cggtacggtc accctccgag ctggccggct gcgtcatcgc tccgaaggat
     1321 cccaacaccg cgctgttccg gatcgaagtc atcaaggttc cactggcaca cccggagcag
     1381 gcacggattg tgagctcgcc ccgcatcttc aacgatctgg tggcgcccaa gacccacccg
     1441 gatactccgg aagacagcat cgaagctgcc aaagaagtcg ccgacgccaa agcgcacggt
     1501 ggattcgtgg gagtttttca cgggaaggaa gaggtcatca accctggatg ggtaaaggag
     1561 ctgctggaca gcgtagtgaa ggcccggggg ggcaccggaa atccaacagc tgccgacagc
     1621 tcaacgctca ggcaggcact ccccagaatc gtggacgctg ccgtgaaggc ggaagaggcg
     1681 caggagccgg attcgactgc cggccccact cagtgccacg acatcacggt ctatcccgca
     1741 atcgggctcg cgggtggagc atgcgccggt tatggccttc tcctcgatat caggaacccg
     1801 gcgcagccgg tcagggtcga cgccgtctcc gattcgaact tctcctactg gcactcggcc
     1861 acgttcaata acgccggcac gaagctgctc ttctcggatg agtggggtgg cggcgtgcag
     1921 ccgaagtgcc gcccgaccga caagaaggag tggggggcgg atgcgatttt ccgcctcggt
     1981 gggacaaagc tgcagttcca gagctactac aagatgccgg ctccgcagac gccggaagag
     2041 aactgcgtcg cccacaacgg ctcgctcatc ccgattccgg gacgcgacgt gatggtgcag
     2101 gcctggtatc agggcggtgt ctcggtcttc gactggaccg atgccaaaca ccccaaggaa
     2161 atcgcctatt tcgaccgcgg gccgctggac gccaccaagc tggagctggg cggctattgg
     2221 tcagcgtact ggtataacgg attcatttac ggatcggaaa tcacccgcgg gctggatgcg
     2281 ttcgagctta agcccagcgg atttttgacc cagaacgaga tcgacgcggc gaagtccgtc
     2341 aagctcgact acttcaacac acagagccag gtgaagttca cctggcccgc gagctactcg
     2401 ctggcccgcg cgtatctgga ccagctggag cgctcccacg gactggagca atcgaagatc
     2461 aacgatgctc gagctgagct ggcaaaggca gagaagtcag cgggcagccg gaaggactcg
     2521 gtgctcgccc agctggtgtc ccggctcgag gccaacgtca atggttcggg cgatgcggcc
     2581 aaggtccgac ttctggcggg tacggtacga cagctttcag cgagttccga gttggcacgc
     2641 cgctaatcgg gctcaggggt cattgaaagg ggcgctctca ggagcgcccc tttctcttta
     2701 cgtttctctt gcttgccttg gcggcagtct ttttcttggt gcgtttaggc ttggcccgct
     2761 tgctcgactt gctgacgtgc tccggcaaca tggcgctgcc ggtctcccga ttccactcct
     2821 caaacgtctg cggtgagatt tttcccttca ctaacaactc ggcgaacttc cggcgctggg
     2881 ctcggctctt gaacggcatg ccgtgctcgc tgccgctact cgtccgaagg tagatcgagc
     2941 ggctcacctt caggcttttc ctgctccggt ggcgtatcgt tccgttccaa tcgccgctgg
     3001 cgcttggcct cctgcttctg ctgtctgttc agttctttct gccgcttctc gaatccgtag
     3061 ttgcgctttg gcacgatgtc tccatgagta ccgcccaact aggcgagtgg gctggtgccg
     3121 gtaatctgta tgcgggtggc ttcaggtgtc cggctgtcgt agaacgtctc gctcacccgg
     3181 gcagtcacct tcattccgtt gtcgagggtc agcgcgagtc gctcgtccgg catgaaaccg
     3241 tcgacgctgc gcgacatgaa cgtgcccgtc cagaatggtc ggcctcctcc ggtaccttga
     3301 gtggtaacct gaacttcaac cgaatggagg tccttgtgat tggcgcgttc gatcagcgcc
     3361 gtatgtgaga tcactggaag cctgctttct tgctggcgag aaagc
//
LOCUS       DASRPQ010001115         1059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2025644, whole genome shotgun sequence.
ACCESSION   DASRPQ010001115 DASRPQ010000000
VERSION     DASRPQ010001115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2025644"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..693)
                     /locus_tag="VFD73_12720"
     CDS             complement(<1..693)
                     /locus_tag="VFD73_12720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZI74859.1"
                     /translation="MAWDDATRHDHRRVSARYPSDMTDREWAVIAPLLPSAQAGGRPR
                     KTDLRAVMDAILYIASGGCQWRMLPRDFPPRSPVQGYFYNWRDSRLWETINHLLVLSA
                     RELEGRDTGPTAGVIDSQSVKTTESGGLSGYDAGKKVKGRKRHIVTDTLGLMLFVLVH
                     GADVQDRDGAPALLKAIRHRFPWLRHIFADGGYAGDKLRAALQGQGVWSIEIIKRSDT
                     AKGFAVLPRRWVV"
BASE COUNT          190 a          349 c          315 g          205 t
ORIGIN      
        1 aacaacccac ctgcgcggta aaaccgcgaa gcccttggcc gtgtcggatc gcttgatgat
       61 ctcgatgctc cagacgccct ggccctggag cgcagcgcgc aacttgtcgc ccgcatagcc
      121 gccatcggca aagatatggc gcagccaggg aaagcggtga cggatcgcct tgagcagggc
      181 tggtgctccg tcgcgatctt gcacatcggc cccatgaacg aggacgaaga gcatcagccc
      241 gagggtgtcg gtaacgatgt ggcgcttgcg gcccttgacc ttcttccccg cgtcgtagcc
      301 cgacaggcct ccgctctcgg tcgtcttcac actctggctg tcgatcacgc ccgccgtggg
      361 accggtgtcg cgcccttcca gttcccgcgc gctcaggacc aagagatggt tgatcgtctc
      421 ccagagacgg ctatcccgcc aattatagaa gtagccctgc accggggacc tcggcgggaa
      481 atccctgggc agcatccgcc attggcagcc gccggatgcg atgtagagaa tggcatccat
      541 caccgcccgc agatcggtct tgcgcggccg tcctcctgcc tgagcggatg gcagaagcgg
      601 cgcgatcacc gcccattccc gatccgtcat gtcactcgga tatcgggcag acacacgcct
      661 gtggtcgtgg cgagtggcat catcccaggc catctcatcc tccgcctctc gaccgagcgg
      721 gggaaatcac aactcactga tatcactcaa ctccttttcg gcccggctct cagatatggt
      781 taaggtgcgt gcttcagcat tgtgttcgct ccctcatacc gtattcgggc aaatcggtgg
      841 ccaagtcccg tcaaacctga tctgatccaa gaggctcagc accgtctcgc caccgtatgc
      901 gctcgccgtg gcgggtcaca ggacctcggt ggcgtgctcg atggcgctga tcgcatcgag
      961 gagggcctgg accgttcgct caacctcctg ggcctcatcg ggcaggggct tgaacaacgt
     1021 cgtgaaggtg cactcgactt ttgaattcgg cgggcgggg
//
LOCUS       DASRPQ010001116         1163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_133093, whole genome shotgun sequence.
ACCESSION   DASRPQ010001116 DASRPQ010000000
VERSION     DASRPQ010001116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133093"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            332..910
                     /locus_tag="VFD73_12725"
     CDS             332..910
                     /locus_tag="VFD73_12725"
                     /inference="COORDINATES: protein motif:HMM:NF014657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceD family protein"
                     /protein_id="HZI74860.1"
                     /translation="MSEGSKPVNSHVRGSSDFVFDMRALGRGAGEFKDEKRTAKAPDG
                     LGSGLVLVPAGGDVALDLRFEAVSEGVLVTGSAVAPLTGECARCLDPLTSTIEVSFQE
                     LYRYLPDPGEDENDGEERFLDGDYLDLEPAFRDAVVLALPLSPLCREDCPGLCVECGA
                     KLADVGPEHGHGDKVDPRWGLLAKLDIHDTTE"
     gene            932..1108
                     /gene="rpmF"
                     /locus_tag="VFD73_12730"
     CDS             932..1108
                     /gene="rpmF"
                     /locus_tag="VFD73_12730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014167345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HZI74861.1"
                     /translation="MAVPKRKMSRSNTRSRRAQWKAAPVTLVECSNCHAQKLPHAACP
                     TCGTYRRRQVLNPA"
BASE COUNT          208 a          356 c          401 g          198 t
ORIGIN      
        1 gccaaaattg agacgctgtt cctgacaacc aacccgctgt actcgttcct gagctcaagc
       61 ctgatcaagg agatcgccaa gtacggcggc gacgtcagcg gcctggtccc cgagccggtc
      121 atcggccgtc tccaggcccg cctcgccgag gattaggcag ctgtcccggc cggtttaccg
      181 tcaagttggg aatagctcag gtcgcgggta cgctgatgcg tcggctaagc aatcacctac
      241 acgataaact gtgatgtcca aggggaacgg taaatcagtc gcgcgcgggg tgcccggtgc
      301 acacggcggg gattcgggtc aggcgggtca ggtgtcggag ggcagcaagc cagtcaactc
      361 tcacgtccgt ggcagctctg acttcgtgtt cgatatgcgc gcgctcggca ggggcgcggg
      421 cgagttcaag gatgagaagc ggacggcaaa agcgcctgac ggtctcggtt ctgggctagt
      481 cttggtgcct gctggcggtg acgtggcgct cgacctgcgg ttcgaggcgg tctccgaggg
      541 ggtgcttgtc accggctcgg cggtcgcccc gctcacgggc gagtgcgcgc gctgcctgga
      601 cccgctgact tccacgatcg aggtcagctt ccaggagctc taccgctacc tgccggaccc
      661 gggtgaggac gagaacgacg gcgaggaacg cttcctcgac ggcgactatc ttgacctgga
      721 gccagcgttt cgcgatgctg tggtgctcgc gctgccgcta tcgccgctct gccgggagga
      781 ctgcccaggg ctgtgcgtcg agtgcggtgc gaaactcgcg gacgtcggcc ctgagcacgg
      841 gcatggtgac aaggtagacc cccgctgggg tctcctcgca aagctagata ttcacgacac
      901 gactgaatag cagactgaca ggagagccga agtggctgtt cccaagcgga agatgtcgcg
      961 cagcaacacc cgttcacgcc gcgcgcagtg gaaggctgcc ccggtgacgc tggtggagtg
     1021 ctccaattgc cacgcccaga agctgccgca tgccgcctgc ccgacgtgcg ggacgtaccg
     1081 ccgccggcag gtcctgaacc cggcctgagc ctgcatgtaa cagggagcgc cggtgagcgg
     1141 acgacgtaat gacggtgacg gaa
//
LOCUS       DASRPQ010001117         2266 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4205252, whole genome shotgun sequence.
ACCESSION   DASRPQ010001117 DASRPQ010000000
VERSION     DASRPQ010001117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4205252"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..446
                     /locus_tag="VFD73_12735"
     CDS             <1..446
                     /locus_tag="VFD73_12735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74862.1"
                     /translation="AAHSVYRDTGVDLLINQAKTISVGSSSLTLVGLDDALLGRPDLA
                     AARADVAPESLEIWLLHEPVYADSIQPSFAPRPACLLAGHTHGGQIRIPFVPALKPIG
                     AGRFLEGWYRDTIAPLYVSHGVGTTAIPARFRCAAELPIFTFRRA"
     gene            complement(417..989)
                     /locus_tag="VFD73_12740"
     CDS             complement(417..989)
                     /locus_tag="VFD73_12740"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HZI74863.1"
                     /translation="MTERKEPQRGITLRFLAEPGDVNFGGKVHGGAVMKWIDQVGYTC
                     AAGWAGCYCVTVYLGGLHFLAPIHVGEVVELQALVIRTGRTSMDIAVDVYARDPKSPD
                     RRRTGHCVIVFVALGPSGRPSPVPQWQPRTELDRVLETYAARVGELRKQMDTEMERHL
                     GTAGALDSVSRRPSAAIASKSSGATEGKDR"
     gene            1112..1318
                     /locus_tag="VFD73_12745"
     CDS             1112..1318
                     /locus_tag="VFD73_12745"
                     /inference="COORDINATES: protein motif:HMM:NF018096.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1059 domain-containing protein"
                     /protein_id="HZI74864.1"
                     /translation="MANSTRKMIDCRRMPSDRNCSATIAGTEDEVLAIAVRHAVEEHG
                     HADTPELREMLRQGLIDEPAEVHA"
     gene            complement(1315..1713)
                     /locus_tag="VFD73_12750"
     CDS             complement(1315..1713)
                     /locus_tag="VFD73_12750"
                     /inference="COORDINATES: protein motif:HMM:NF025183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4186 domain-containing protein"
                     /protein_id="HZI74865.1"
                     /translation="MRSLDKVFAGLASSSFRRSFRLSDRERRYLQDRGMETILLHART
                     FIDQRLAPEYPARDGKQTPYHGHPAFVAQHATATCCRNCLEKWHGIPKGHWLSEQECE
                     HVLASLERWLREAGGWSSSGRQRANPESVT"
     gene            complement(1697..2245)
                     /locus_tag="VFD73_12755"
     CDS             complement(1697..2245)
                     /locus_tag="VFD73_12755"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI74866.1"
                     /translation="MTSTRRTGDLHALAEDHRAALGQFLATARRIPPQSWTTPLAPGK
                     WSPADITSHLAQSYRVLRAELAGGRGMALRLPYWQRWILRRRVLPGILAGKGFPPNAR
                     APKETRPRDNLTDAREALRILADEAEGFARELAARAGSERVRLTHAYFGAMSARQSLQ
                     LVTVHTRHHARQLERVPREIAG"
BASE COUNT          398 a          737 c          695 g          436 t
ORIGIN      
        1 cagccgctca ctccgtctat cgggataccg gagtggactt gttgatcaac caggcaaaga
       61 ccatcagcgt ggggtccagt tctttgaccc ttgtcggcct ggatgacgct ctgctgggcc
      121 gtcccgatct ggctgccgcc cgcgcagatg ttgccccaga gagtctggag atctggctgc
      181 tgcatgagcc ggtatacgcg gactcgatcc agccgagctt cgcgccccga ccggcatgtc
      241 ttttggccgg acatacccac ggcggccaga ttcgaatccc atttgtgccg gcgctcaagc
      301 ctatcggagc cgggcggttt ctggagggat ggtaccgcga cacgatcgcg cctttatacg
      361 tctctcacgg ggtcggcacc accgcgatac ccgctcgatt tcgctgtgcc gccgagctac
      421 cgatctttac cttccgtcgc gcctgagctc ttgctggcaa tggcagccga tggtctccga
      481 gacacgctgt ccaacgcgcc tgccgttccc aggtgtcgct ccatctcggt atccatctgt
      541 ttccgaagct cacccacccg cgccgcatag gtttccagta ctcgatccaa ctccgttcga
      601 ggttgccact ggggaacagg ggatggtcgc ccactcggtc cgagagcgac aaacacgatg
      661 acgcaatgtc cggtgcgccg gcgatcaggg ctcttggggt cgcgcgcgta cacgtcgacg
      721 gcaatgtcca tgctggtgcg accggtccgg atcaccagcg cctgcagctc gacgacctct
      781 cccacgtgaa tgggtgcgag gaagtgcagc ccgccaaggt acacggtcac gcaataacag
      841 ccggcccacc cggcggcgca ggtgtatccc acctgatcga tccacttcat caccgcaccg
      901 ccgtgtacct tcccgccgaa gttcacatcg cccggctcgg ccaaaaagcg gagcgtgatt
      961 ccgcgttgag gttctttgcg ctcggtcatt gtggcctcat cgttggcacg atccggtcat
     1021 aggtcccttg cggggtcagg aaccgaggcg aatactgaac tgctcccgca atacctacgg
     1081 ttcttcccga tgtactcgta aggaggctga tatggccaac tccacccgca agatgatcga
     1141 ctgccggcgc atgcccagcg accgcaactg tagcgccact atcgcaggca ccgaggatga
     1201 agtgctcgcg atcgcggttc gccacgccgt cgaagaacac ggccacgctg acacccctga
     1261 gctccgcgag atgctccgcc aggggcttat cgatgagccg gcggaggtac acgcctaagt
     1321 cactgactcc ggatttgcgc gctggcgtcc agaggagctc cagccaccgg cttctctgag
     1381 ccagcgctcg agactggcga gcacgtgctc gcactcctgc tcgcttagcc aatgcccctt
     1441 cggaattcca tgccacttct ccagacaatt acggcagcag gtggcggtgg cgtgctgcgc
     1501 aacaaacgct ggatggccgt gatagggcgt ctgttttccg tctcgcgccg ggtactcggg
     1561 cgccagccgc tgatcgatga atgttctggc atgcagcaga atcgtctcca tgccgcggtc
     1621 ttggagatag cggcgttccc ggtcggacag acgaaagctg cgacggaacg aggagctcgc
     1681 caatccggca aataccttat ccagcgatct cacgtggaac gcgttccaac tggcgtgcgt
     1741 gatgccgagt gtgcaccgtg accagctgta ggctctgacg ggctgacatc gcaccgaagt
     1801 aggcgtgggt gagccggact cgttccgagc cggcgcgagc agccagctcc cgtgcgaagc
     1861 cctctgcctc gtcggcgagg attcgcagcg cctcgcgcgc atctgtcagg ttgtcgcgag
     1921 gccgggtctc tttcggagcg cgggcattgg gaggaaatcc tttcccggcc aatatgccgg
     1981 gtagaactct tcgtcggagt atccagcgct gccagtaggg cagccgaagt gccatccccc
     2041 tgcctccagc gagttcagcg cgaagcaccc tataggattg ggcgaggtgg ctggtgatgt
     2101 ctgctggact ccactttccc ggagccagtg gcgtggtcca ggactgggga gggatccggc
     2161 gggccgttgc caagaattgg ccgagtgccg cgcgatgatc ctcagccagc gcatgcagat
     2221 cgccggtgcg ccgagtgctc gtcatgcggt ggggcgcccc tcaacc
//
LOCUS       DASRPQ010001118         1709 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3897966, whole genome shotgun sequence.
ACCESSION   DASRPQ010001118 DASRPQ010000000
VERSION     DASRPQ010001118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1709
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3897966"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..470)
                     /locus_tag="VFD73_12760"
     CDS             complement(<1..470)
                     /locus_tag="VFD73_12760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74867.1"
                     /translation="MKQLAALLVLVLPALPGTTSASSMQTGIVHDSIDVLHQAHAAQR
                     EFERTRRANLPGETGGARACDERIGRFCYWYEPFSDPSLTESGIVREARGDLIRALEN
                     AAGQLPGDGWIAGQLVRYLVEQGAADSAIAAAQRCRAARWWCSALEGFARHMAH"
     gene            517..1329
                     /locus_tag="VFD73_12765"
     CDS             517..1329
                     /locus_tag="VFD73_12765"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI74868.1"
                     /translation="MASGIALSAGAVGAQVVKLWPGVAPGSERWTQKERSVENTPLGT
                     VVFNVVTPTLTAYLPDRKNATGTGIIVAPGGAFVALTMDLEGVGAARWLQRRGIAAFL
                     LKYRIVEKRQEGIPEMDMDTAGRYGIADGIQALKVVREHASEWRISPDRVGFLGFSAG
                     AMVASGALLQKDATARPNFVALIYGAPFGAMPAIPAKLPPIFMAWAQDDQVALEPVVK
                     FRDALVAGGQKPEIHVFSAGGHGFGTRKQGTSSDHWIDELYYWLGAEGFTKR"
     gene            complement(1338..>1709)
                     /locus_tag="VFD73_12770"
     CDS             complement(1338..>1709)
                     /locus_tag="VFD73_12770"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI74869.1"
                     /translation="AGQTQLSMTLAAQASEMQPVQELLVWIADNLGRDLSTARLADRV
                     SMSVRNFGRVFSANIGTTPARYVLHLRVEAARRLLQSSPNDLKRVARTVGFGSVDGMR
                     RAFIRVLGKSSRQVREGDGTR"
BASE COUNT          304 a          550 c          557 g          298 t
ORIGIN      
        1 tcatgcgcca tgtgacgggc aaatccttcg agcgcgctgc accaccaccg cgcggcccgg
       61 cagcgctgtg ccgccgcgat cgccgaatcg gcggcgccct gctccaccag gtaacgcacc
      121 agctggcccg cgatccagcc atcacccggg agctgacccg cggcattctc cagcgcgcga
      181 atgagatcgc ctcgcgcttc tctcacgatt cccgattcgg tgagactggg atcggagaat
      241 ggttcgtacc agtagcagaa ccgcccgatc cgctcgtcgc aggctcgggc gccaccggtt
      301 tcgccgggca gattggcccg ccgggtacgc tcgaactctc tctgagcggc atgggcctgg
      361 tggaggacgt cgatcgagtc gtgtacgatt ccagtctgca tcgacgatgc cgaggtagtc
      421 cccggaaggg ccggaagaac caggacgaga agagctgcca gctgcttcac cacaatgaaa
      481 gcgctttctg tgaacctgac acgcatgata tgctgggtgg cgtctggaat cgcgctcagc
      541 gccggagcgg ttggtgccca ggtcgtcaag ctctggcccg gcgtcgctcc cggttccgag
      601 aggtggaccc agaaggagag atcggtcgag aacactccgc tcggcaccgt ggtcttcaac
      661 gtggtgactc cgacgttgac ggcgtatctc cccgatcgga aaaacgccac cggcaccggg
      721 atcatcgtgg ctccgggcgg tgccttcgtc gcgctcacga tggatctcga gggcgtcggc
      781 gcggcccgct ggctgcagcg gagaggcatt gccgctttcc tcctcaagta tcgaatcgtg
      841 gagaagcggc aggaagggat tccggagatg gacatggata ccgccgggcg ctacggcatt
      901 gccgacggga ttcaagcgct caaggtggtg cgagagcacg cctcagagtg gcgaatctcg
      961 cccgaccgag tgggattcct gggattttcc gccggcgcca tggtcgcaag cggggcgttg
     1021 ctccagaaag acgcgaccgc acgtcccaac ttcgtcgcgc tgatctacgg cgctcccttt
     1081 ggcgctatgc cggcgatccc ggccaagctg ccgccgatct tcatggcatg ggcccaggac
     1141 gatcaggtgg cgctggagcc ggtggtaaag ttccgtgacg cgctggtcgc cgggggacag
     1201 aagcccgaga tccacgtctt cagcgcggga gggcacggct tcggcacgcg gaagcagggc
     1261 accagcagcg atcattggat tgatgagctg tactactggt tgggcgccga agggtttaca
     1321 aaaaggtgac tcaccgctca ccgcgtaccg tcaccttctc tcacctgccg ggacgacttt
     1381 cccaagactc ggatgaacgc tctgcgcatc ccgtccacgc tgccgaatcc aactgtgcgc
     1441 gccacgcgct tgagatcgtt cggtgacgac tgcagcagcc ggcgcgcggc ctccactcgg
     1501 aggtgaagca cgtacctcgc cggagtggtt ccaatgttcg cgctgaatac ccggccgaag
     1561 ttccgcacac tcatcgatac gcggtcggcg agcctggcgg tggagaggtc gcgacccaga
     1621 ttgtcggcga tccagaccag aagctcctgc accggctgca tctcgctggc ctgcgccgcc
     1681 agggtcatgc tgagctgagt ctgtccggc
//
LOCUS       DASRPQ010001119         1387 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1708907, whole genome shotgun sequence.
ACCESSION   DASRPQ010001119 DASRPQ010000000
VERSION     DASRPQ010001119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1387
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1708907"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            92..274
                     /gene="rpmD"
                     /locus_tag="VFD73_12775"
     CDS             92..274
                     /gene="rpmD"
                     /locus_tag="VFD73_12775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HZI74870.1"
                     /translation="MGRLKVQQTRSTIGCKKNQRDTLRSLGLKRIGDVVVKEDRPEIR
                     GMIQTVTHLVKVEEVE"
     gene            280..723
                     /gene="rplO"
                     /locus_tag="VFD73_12780"
     CDS             280..723
                     /gene="rplO"
                     /locus_tag="VFD73_12780"
                     /inference="COORDINATES: protein motif:HMM:TIGR01071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HZI74871.1"
                     /translation="MAIKIHHLRPAPGAKTEKNRVGRGEGSKGKTAGRGTKGSKARKQ
                     ISAAFEGGQMPIHMRLPKLKGFNNAFRTEYQVVNVAALANLFPRGGAVDVDALVAAGA
                     VRKGLPVKVLGQGELGSVKLDVTANAFSGTARDKIEAAGGTVTEL"
     gene            858..>1387
                     /locus_tag="VFD73_12785"
     CDS             858..>1387
                     /locus_tag="VFD73_12785"
                     /inference="COORDINATES: protein motif:HMM:NF012564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74872.1"
                     /translation="MLSAFASAFRTPDLRKKLLFTLGIIVLYRLGASVPTPNTNVKNI
                     NNCIQIAGSGASKDVYSLINLFSGGALLRLSVFALGILPYITASIIIQLLVVVIPRFE
                     QLKKEGQSGQQKLTQYSRYLTIGLAVLQSTGFIALARSGQLFQGCNDPILYKTDVFTL
                     STMVLCMTAGTGVIMWL"
BASE COUNT          260 a          433 c          442 g          252 t
ORIGIN      
        1 agccggaggc ggtcgcctcc cggcgcggca tgtccgtgga ggacgtcgct ccggcggcgc
       61 tgctgaaggc tcgcgcgcag gtggccggct gatggggcgc ctgaaggtcc agcagacccg
      121 gtccaccatc ggctgcaaga agaaccagcg ggacaccctg cgctcactcg gcctgaagcg
      181 gatcggggac gtggtggtca aggaggaccg tcccgagatc cggggcatga tccagaccgt
      241 gactcacctc gtcaaggtcg aggaagtcga gtaaacccga tggctatcaa gattcatcat
      301 ctccgtccgg cgccgggtgc gaagaccgag aagaaccggg tcggccgggg cgagggctcc
      361 aagggcaaga ccgccggccg cggtaccaag ggatccaagg cccgcaagca gatctcggcc
      421 gccttcgagg gtggtcagat gccgatccac atgcggctgc ccaaactcaa gggattcaac
      481 aatgcgttcc ggaccgaata tcaggtcgtc aacgtcgctg cgctcgcgaa tctgttcccg
      541 cgcggcggcg ctgtcgacgt cgacgccctg gtggctgccg gggcggtacg caagggcttg
      601 ccggtcaagg ttctcggcca gggcgagctg ggctcagtca agctcgatgt gaccgcgaac
      661 gccttctccg gcacggcccg tgacaagatc gaggctgctg gtgggacggt caccgagctg
      721 taagccctga tagtgaccgc cgcggctgtt aatctgaagg tcagagtcga cctccgcagc
      781 cgcattggcc gggatctgcg gggaccatcg ctcgcgacga ccgtccggtc ggccgctcaa
      841 tccgcacagg aggatgtgtg ctcagcgctt ttgcatccgc gtttcgaacg ccggatctgc
      901 gcaaaaagct gcttttcacg ctgggcatca tcgtgctcta ccggctcggc gcctcggtgc
      961 cgacgccgaa cacgaacgtc aagaacatca acaactgcat ccagatcgcc ggtagcggag
     1021 cgtcaaaaga cgtttattcg ctgatcaacc tgttctccgg cggtgctctg ctcaggctgt
     1081 ccgtgtttgc cctggggatc ctgccctaca tcacggcgag catcatcatc cagctcctcg
     1141 tcgtcgtcat cccgaggttt gagcagctga agaaggaagg tcagtccggc cagcagaagc
     1201 tgacccagta cagccgatac ctcaccatcg ggttggctgt cctgcagtcg accggtttca
     1261 ttgccttggc ccgatctggc cagctgttcc agggctgcaa cgatccgatt ctgtataaaa
     1321 cggacgtttt tacactatcg acaatggtgc tctgcatgac cgccggcacg ggcgtgatca
     1381 tgtggct
//
LOCUS       DASRPQ010001120         2450 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_762313, whole genome shotgun sequence.
ACCESSION   DASRPQ010001120 DASRPQ010000000
VERSION     DASRPQ010001120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_762313"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1062)
                     /locus_tag="VFD73_12790"
     CDS             complement(<1..1062)
                     /locus_tag="VFD73_12790"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HZI74873.1"
                     /translation="MTLILVVDDVPALTEQYAYDLKRVGSYDVITAKDGRQALDALKG
                     AAVDCMILDLEMPGMDGFEVLRALNQQGSEVPVIVYTGTGNYERCIQAVRLGAVGFID
                     KAEPMERVVREVEAALERQRLRREVAALQRQLGVQTSMVGSSAPMARLREAISRVAPI
                     PSSVLVLGESGSGKELVARDLHRMGPAPDAPFLAINSAALPEQLVESELFGHERGAFT
                     GAVGTRKGAFEAAERGSLFLDEIGELPLASQAKLLRVLEERRVTRIGGSRSFPVEARV
                     VAATNRDLEAEVEAGRFRADLYFRLNVHLLRVPPLRDHLSDVPELAERFLVSIAERFG
                     IRPKRLSADALEALMRYDWA"
     gene            complement(1059..>2450)
                     /locus_tag="VFD73_12795"
     CDS             complement(1059..>2450)
                     /locus_tag="VFD73_12795"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI74874.1"
                     /translation="AMRLAGLSLLQLQDSIGRILSSGHFRNQFDQLQPELPQQLASIA
                     DTLVLVRARTSDAPLIALTRIDSLRIGGKAFTLVGGIEADNRLLQQLARERELSVSMV
                     YSGVRPDSLSGQIVRAVSLPYLDLLKPVGQQRDTARLVLAQSLEPLHALRRGVTRWFI
                     LALALTLLGATLVAAWLSALVSRPLRQLAEKTSNIDLDRLDQSFDSDRGDEIGSLSRL
                     LGAMTDRLRNSSARLREAERRAAVGDLARQVNHDIKNGLVPIRNVFRHLTQVAKEEPQ
                     RLAEVYEARRGTLDSSVEYLETLARHYDRLSPAAERRPCDVNAIIEQVLRSTAQDGRP
                     VERSLEQKLPPVLADELMLRRIVENLVGNALDSTAGRTGAAVRVSTQRVGGTDEPERV
                     RIVVSDSGHGMTESELQRAFDDFYSTKPGGTGLGLSIVRRLIMDLNGAIRIETEPGVG
                     TSATVELPAEPSR"
BASE COUNT          447 a          819 c          754 g          430 t
ORIGIN      
        1 agcccagtcg taccgcatga gggcctcgag agcgtcggcc gagagccgct ttggccgaat
       61 cccaaaccgt tcggcgatcg ataccagaaa acgctcggcc agctccggca catcggagag
      121 atggtcgcgg aggggcggaa cccggagcag atgcacgttc agtcggaagt acaggtcggc
      181 ccggaaccgc cccgcttcca cttcagcttc cagatcccgg ttcgttgccg ccaccactcg
      241 tgcttccacc ggaaacgaac gggagccgcc gattcgggtg acccgacgct cctccaggac
      301 ccggagcagc ttggcttgtg atgccagcgg aagctcaccg atctcatcga gaaagaggct
      361 tccccgttca gctgcttcga aagctccctt tcgggtgccg accgctccag taaacgcccc
      421 ccgctcatgc ccaaagagct cgctctcgac cagctgctcc ggcagggccg cactgttgat
      481 agcgagaaac ggcgcatcag gtgccggccc cattcggtgc aggtctcgcg cgaccagctc
      541 cttgccggaa ccgctctctc ccaggaccag cactgagctg gggatgggag ccacccgcga
      601 aatcgcttcc cgcaggcgag ccatcggcgc actgcttccc accatcgagg tttgcacccc
      661 gagctggcgc tgcagcgccg caacctctcg gcggagccgc tggcgttcca gggcggcctc
      721 gacctcgcgc accacccgct ccattggttc ggccttgtcg atgaaaccta cagcgccgag
      781 ccggactgcc tggatgcatc gctcgtagtt gccggtgccg gtgtagacga tgaccggcac
      841 ctcgctgcct tgctggttga gcgcgcggag gacctcgaac ccgtccatgc cgggcatctc
      901 gagatccagg atcatgcagt ccaccgccgc gcctttgagg gcgtccagcg cctgacgacc
      961 atctttggcg gtgatcacgt catagctgcc gacccgtttc aaatcgtagg cgtactgctc
     1021 ggtgagcgcc gggacgtcgt ctaccaccaa gatcaaggtc atctcgaagg ctctgccggc
     1081 agctcgactg tcgcgctggt acccactccg ggctccgtct cgatccgaat cgctccattc
     1141 aggtccatga tcaggcgacg cacaatcgag agtcctaacc cggtgccacc cggcttcgtg
     1201 ctgtagaagt catcgaacgc ccgctgcaac tcgctctccg tcatcccgtg gccgctgtcc
     1261 gacacgacga tgcggacccg ctctggctcg tcggtaccgc cgacccgctg agtagatacc
     1321 ctcaccgctg cgccggtgcg cccggcagta ctgtccagcg cattgcccac gagattctcc
     1381 acgatcctcc gcagcatcag ttcatccgcc aggaccggcg gaagcttctg ctcgaggctg
     1441 cgctcgactg gtctgccgtc ctgagcggtc gaccgaagca cctgctcgat gatggcgttc
     1501 acgtcgcacg ggcgccgttc tgcggctggc gacaggcggt cgtagtgacg ggcaagtgtc
     1561 tccaggtact ccacgctgga atcgagggtt cctcggcgtg cttcgtaaac ctcggccaag
     1621 cgctgcggct cttctttcgc gacctgggtc aagtggcgga acacatttct aatcggcacg
     1681 agaccgttct tgatgtcgtg gttcacctgg cgggccagat cgccgaccgc ggcccgtcgc
     1741 tccgcctcac gtagccgggc ggagctgttg cgaagccgat cggtcatggc accgagcagg
     1801 cgagagagcg agccgatttc atccccgcga tcgctgtcga agctctgatc cagccggtcg
     1861 agatcgatat tggatgtctt ttcagccaat tgtcgcaagg gccggctcac cagtgcggaa
     1921 agccaggcag ccaccagcgt cgcgcccagg agcgtgagcg ctagtgccag gataaaccac
     1981 cgcgtcacgc ctcgacgcaa agcgtgcaga ggctcgagcg actgggcgag caccaggcgg
     2041 gcagtgtcgc gctgctggcc gactggtttc agcaggtcga gatagggcaa agagacagcc
     2101 cggactatct gacccgacag cgaatcaggg cgcactccag agtaaaccat ggagaccgag
     2161 agctcgcgct ctctggccag ttgctgaagg agccggttat cggcttcgat cccgccaacc
     2221 agggtgaacg ccttcccgcc gatcctgagc gagtcgattc tggtgagagc gatgagtgga
     2281 gcatccgacg tccgggctcg aaccagaacg agagtgtcgg cgatcgaggc gagctgttga
     2341 ggaagctcgg gctggagctg gtcgaactga ttccgaaagt ggccagagct cagaattctg
     2401 ccgatgctgt cctgcagctg caacagggag agaccggcga gccgcatcgc
//
LOCUS       DASRPQ010001121         1975 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1709606, whole genome shotgun sequence.
ACCESSION   DASRPQ010001121 DASRPQ010000000
VERSION     DASRPQ010001121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1975
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1709606"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..399)
                     /locus_tag="VFD73_12800"
     CDS             complement(<1..399)
                     /locus_tag="VFD73_12800"
                     /inference="COORDINATES: protein motif:HMM:NF013703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HZI74875.1"
                     /translation="MGTVIASGLVGTYSLVKLWRGDWVVAFPRGRGFGPDWSIIRSLF
                     RFGLPAGVQGVAMNVGGVILLGFIGSLAQSAEAQAAFAVSYTQLFSLITWTSVGLMGA
                     AAAIAGQNLGAGHPDRADRAVHIAARFGLAA"
     gene            complement(436..1083)
                     /locus_tag="VFD73_12805"
     CDS             complement(436..1083)
                     /locus_tag="VFD73_12805"
                     /inference="COORDINATES: protein motif:HMM:NF013703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HZI74876.1"
                     /translation="MTSANLSGRAATAPTTPVVAAAAPPHPKVYDRSIVEGPLGPAVW
                     KIAWPTMLTNIVGGLQGIVDHVLVGHLVGFRGNAAIGVSWQIMLVVIIFVSSIFTGMS
                     VLVARFAGAGEKDKVDRTVYQAFLTAVVMSLGIMAPIGYFTAPWLLDLVNAAPGVKTE
                     ALPFLRVMFLFSTGMLLFYMLSGALRSAGDARTPMLLGIALTLLNLVLNVILISG"
     gene            complement(1100..1603)
                     /locus_tag="VFD73_12810"
     CDS             complement(1100..1603)
                     /locus_tag="VFD73_12810"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI74877.1"
                     /translation="MLTVTEIAQELEQESQATRRVLERVPEDQLHWSPDPKSMTLGQL
                     AMHVANLPGAITEIATRPSFDVRTTIPRPEAATTGEILAAFDASMDRARKILGSMKDS
                     ELASPWRMMKGGQELWSLPRAAVLRTVLLNHWYHHRGQLTVYLRQTGALVPAVYGDSA
                     DEKAIPV"
     gene            complement(1609..>1975)
                     /locus_tag="VFD73_12815"
     CDS             complement(1609..>1975)
                     /locus_tag="VFD73_12815"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZI74878.1"
                     /translation="KEAVATIAVRDLQAAKRFYEGTLGLKPIAAQEQEALTYQAGSAK
                     ILVYRSQYAGSNQATAATWLVGKDLEKVVQGLRGKGVTFEHYSLPGLTLKGDIHEGGG
                     MKAAWFKDPDGNIHALVTG"
BASE COUNT          375 a          622 c          624 g          354 t
ORIGIN      
        1 cgcggcgagc ccgaaccgcg cggcgatgtg aaccgcccgg tcggcccggt cagggtgtcc
       61 ggctccgaga ttctggcccg cgatcgccgc tgcagcgccc atgagtccga ccgaggtcca
      121 ggtgatcagg gagaacagct gggtgtacga tacggcgaac gcggcttgtg cttcggcgct
      181 ttgggccagt gagccaatga atcccaacag gatcaccccg ccgacgttca tggcgacgcc
      241 ctgcacaccg gcaggcaacc cgaaacgaaa aagtgatctg atgatgctcc agtccggtcc
      301 gaacccgcgt cctcggggaa atgccacaac ccaatccccg cgccagagct ttaccaggga
      361 ataggtccct acgagaccag aggcaatcac ggttcccatg gccgagccga ccgttccgaa
      421 gcgtgggatc ggtcctcatc cactgatcag gatgacgttg aggacgagat tgagcagcgt
      481 gagagcgata cccaacagca tgggagtccg cgcgtcgccg gccgagcgaa gcgccccgct
      541 cagcatgtag aagagcagca tgccggtgct gaagaggaac atgacccgaa gaaacgggag
      601 cgcctcggtc ttcacgcccg gcgcggcgtt gaccagatcc agcagccagg gcgccgtgaa
      661 atatcctatc ggcgccatga tgccgagcga catcacgacc gcggtgagaa aggcctggta
      721 gacggtgcga tcgaccttgt ccttctcgcc ggccccggcg aatcgggcga ccaggacgct
      781 catgccggtg aagatcgagg acacgaagat gatcaccacc agcatgatct gccagctcac
      841 cccgatggct gcattgccac gaaagcctac cagatgtccc accagcacat gatccacgat
      901 tccttggagc ccgcccacaa tgttggtgag catggtgggc caggcgatct tccagaccgc
      961 tggcccgagc ggcccttcga cgatggagcg gtcatagact ttggggtgcg gcggtgccgc
     1021 agccgcgacc accggagtgg tgggtgcggt tgcagcacgg ccggaaaggt tggccgaggt
     1081 cactcgcttg gaatgttcat cagactggaa tcgccttctc gtccgcgctg tcaccgtaca
     1141 ccgccggcac gagagcgccg gtctgccgca gatagacggt gagctggcct cggtggtgat
     1201 accagtggtt cagcagaact gttcggagga ccgcagcgcg gggcagcgac cacagctcct
     1261 ggccgccttt catcattcgc cagggcgaag ccaattctga gtccttcatg gaacccagga
     1321 tctttcgcgc ccggtccatg ctggcgtcaa acgccgccag aatttccccg gtcgtggcgg
     1381 cctccggccg ggggattgtg gtacgcacgt cgaacgatgg gcgggtggca atctcggtga
     1441 tggcgcccgg cagatttgcc acgtgcatgg caagctgtcc gagggtcatc gacttgggat
     1501 ccggactcca atgcagctgg tcttccggca cccgctccag cactcggcgg gtggcctggg
     1561 attcctgttc cagctcctga gcaatctcag tcactgtcag catgatggtt atcccgtgac
     1621 aagggcgtgg atgttgccgt cgggatcctt gaaccaggct gccttcatgc ctccgccctc
     1681 gtggatgtca cccttgaggg tgagccccgg cagcgaatag tgctcgaatg tgacgccctt
     1741 gcccctgagt ccctgcacca ccttttccag atccttgccg acgagccagg tggcagcggt
     1801 agcctgattg cttccggcat actgcgagcg atacaccaga atttttgcgc tgccggcctg
     1861 gtacgtcagc gcttcctgct cctgggcggc gatgggcttg aggccgagcg ttccttcgta
     1921 gaagcgcttg gcagcctgaa ggtcccgaac ggcaatggtg gcaaccgctt cttta
//
LOCUS       DASRPQ010001122         1383 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3284681, whole genome shotgun sequence.
ACCESSION   DASRPQ010001122 DASRPQ010000000
VERSION     DASRPQ010001122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1383
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3284681"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..485
                     /locus_tag="VFD73_12820"
     CDS             <1..485
                     /locus_tag="VFD73_12820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74879.1"
                     /translation="LMPYEVEQGKLLGLFQRLQAQTPGATYLMSWISDYSLLRFSFPG
                     SRLDLSLSTLADSRVSRPGLEGQLSPADQWWAGVDRYVGTRARLATKPRPWEYIGWTY
                     NPATLKLTRLLARLGLPPPSAAKLHNHLAGSWIWSDPSLKLTLAHRSGQYYVYEVTPR
                     "
     gene            663..851
                     /locus_tag="VFD73_12825"
     CDS             663..851
                     /locus_tag="VFD73_12825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74880.1"
                     /translation="MNKERREEGRPPSSRSQGTGNPRHGLESRSKTELENRARELHIH
                     GRSKMSKAELVEAIRERE"
     gene            867..1070
                     /locus_tag="VFD73_12830"
     CDS             867..1070
                     /locus_tag="VFD73_12830"
                     /inference="COORDINATES: protein motif:HMM:NF012621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-associated domain-containing
                     protein"
                     /protein_id="HZI74881.1"
                     /translation="MEQLSLRIAGMSCAGCVSSIRHALARLPGVEVKEVEVGRATLAY
                     DPGLSTPDTIESAIVKAGFEPLT"
     gene            complement(1067..>1383)
                     /locus_tag="VFD73_12835"
     CDS             complement(1067..>1383)
                     /locus_tag="VFD73_12835"
                     /inference="COORDINATES: protein motif:HMM:NF013252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74882.1"
                     /translation="GRGTLAYAAFDVLWLNGRDVRSLSLARRKRRLERLIPSSNGALN
                     RVPSFPEEGRELFDAACSLDLEGIVAKRKADSYRLETAWYKIKNPAYTQAEGRRELFE
                     RR"
BASE COUNT          263 a          427 c          440 g          253 t
ORIGIN      
        1 ccctgatgcc ctacgaagtg gagcagggaa agctgttggg gctgtttcag cgactacaag
       61 cacagacgcc gggagccacc tacctcatgt cctggatctc ggattacagc ctccttcggt
      121 tcagcttccc cgggagtcgc ctcgatctca gtctgagtac gctcgctgac tcccgggtct
      181 cccgaccagg actggaaggg cagctcagcc ccgccgatca gtggtgggcg ggagtggatc
      241 gctacgtcgg gaccagagcg agattggcaa caaagccccg gccctgggaa tacatcggct
      301 ggacctataa tccggcgacg ctcaagctca cgcgcctgct tgctcgattg ggtctccctc
      361 ctcccagcgc cgccaaactc cacaatcacc tggccggcag ctggatctgg tcggatccct
      421 ccctgaagct cacgttagcg caccggtcgg gccagtacta cgtgtacgag gtcacgcctc
      481 gatgatgtgt gcgccacctc acggttgatt ccgcccgagt tctgcaattc tatcgattct
      541 gtggtcaccc tgagtcccgc acgggcacaa cctcgactcg gccctttgct tggctcaggg
      601 cgacatgagt gagcttggga tgtattgaaa cgaggaccga ccccgaacgc gcggctcgaa
      661 cggtgaacaa ggagcgccgt gaggaagggc ggcctcccag cagtcgcagt cagggcaccg
      721 ggaatccgcg ccacggtttg gagtctcgct ccaagaccga gctggagaac cgggcgcgcg
      781 agctccacat tcacggccga agcaagatgt ccaaggcgga gctggtcgag gcaattcgcg
      841 agcgggagta acgatcggca atctatatgg aacagctgtc actcaggatc gccggcatga
      901 gttgcgccgg gtgcgtcagc agcatacggc acgcgctggc acggctgcct ggcgtggaag
      961 taaaggaggt ggaggtcgga cgggccacgc tggcgtacga tcccggtctc agcactccgg
     1021 atacgattga atcggcgatt gtgaaagcgg ggttcgagcc tctgacctag cgccgttcga
     1081 agagctcgcg tctgccttcg gcctgggtat atgccgggtt tttgatcttg taccaggcgg
     1141 tctccaaccg gtaggaatcc gccttgcgtt tggcgacgat gccctcgaga tcgagggagc
     1201 aagccgcgtc gaagagctcg cggccttcct ccggaaagct gggcacccga ttcagtgcac
     1261 cattggagct cggaatgagc cgttcgagcc gccgcttccg ccgggcgagt gacagtgatc
     1321 ggacgtcacg gccgttgagc cacaggacgt caaacgcggc gtaggccagc gttccgcgtc
     1381 cac
//
LOCUS       DASRPQ010001123         1051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3898474, whole genome shotgun sequence.
ACCESSION   DASRPQ010001123 DASRPQ010000000
VERSION     DASRPQ010001123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3898474"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            151..624
                     /locus_tag="VFD73_12840"
     CDS             151..624
                     /locus_tag="VFD73_12840"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI74883.1"
                     /translation="MHTGLRLEQVTQENIRAACKLKMRPDQEDLVAPVAWSLADAYTM
                     PDIAWPRLIYDSGQLVGFIMAAFAPEHQNPLFRSYLWRLNIGAGCQGKGYGRFAVEAL
                     CREATRRGQRRLTVGYHPYQHGPEGFYRRLGFHPTGEHNEGEVIAERILSLDAAR"
     gene            complement(675..>1051)
                     /locus_tag="VFD73_12845"
     CDS             complement(675..>1051)
                     /locus_tag="VFD73_12845"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HZI74884.1"
                     /translation="LVVVHGADRVGTVSWRRVQTGPTASNWALGIGLAPEFRGRGYGS
                     EAQRLLVRYLFAHTQVNRIEATTEITNVAEQRALEKAGFTREGILRGTTFRQGRWHDQ
                     VLFSVLRDEVKLEDSAAADGLA"
BASE COUNT          196 a          355 c          330 g          170 t
ORIGIN      
        1 tgggtgtaac caccctccgg ggttcaaatc cccgatcctc cgcagctcgg tgccgttgcg
       61 cccgcacgca ttcggatcgt cacagccgtg cccggcaaag cgacgcgccg aacccggcaa
      121 cagccgcttg ggacgacgta acgtggggat gtgcacacag ggctgcggct ggagcaggta
      181 acgcaggaaa acatccgggc tgcctgcaaa ctgaagatgc ggcctgatca agaagacctc
      241 gttgccccgg tcgcctggtc cctggccgat gcctacacga tgcccgatat cgcatggcca
      301 cggctgattt acgacagcgg ccaactggtc ggcttcatta tggccgcatt tgctcccgaa
      361 catcagaatc cgctgttccg cagctacctg tggcggctga acatcggcgc cgggtgccag
      421 ggcaaaggct acggacggtt cgcggtcgaa gccctctgtc gtgaggccac acggcgcgga
      481 cagcgtcggc tgacggtggg ctaccaccca taccagcacg gcccggaagg cttctaccgg
      541 cgcctaggct tccatcccac cggggagcac aacgaaggcg aggtaatagc cgaacgcatc
      601 ctctcccttg atgcggcaag gtagtacaga ccggtgcgac acggttgccg acggcaagta
      661 tgcggcggga aggctcaggc caggccgtcc gctgctgcgg agtcctctag cttgacctca
      721 tcacgcagca cgctgaaaag cacctggtcg tgccaccgcc cttggcggaa cgtggtgccg
      781 cgcaggatgc cctcgcgcgt gaaccccgcc ttctccagtg cccgctgctc agccacgttg
      841 gtgatctcgg tggtggcctc gatgcggttg acctgtgtat gggcaaacaa gtagcggacc
      901 agcagtcgct gcgcctcaga accgtagccg cgtccccgga actccggcgc cagcccgata
      961 ccgagggccc aattgctggc cgtcggcccg gtctgaactc ggcgccagga aacagtgccg
     1021 acccgatcgg cgccgtgcac cacgactagc g
//
LOCUS       DASRPQ010001124         1403 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1709778, whole genome shotgun sequence.
ACCESSION   DASRPQ010001124 DASRPQ010000000
VERSION     DASRPQ010001124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1403
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1709778"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..713)
                     /locus_tag="VFD73_12850"
     CDS             complement(93..713)
                     /locus_tag="VFD73_12850"
                     /inference="COORDINATES: protein motif:HMM:NF025380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HZI74885.1"
                     /translation="MAAIVAAIVLIVVLSAVHLLPQLRNPFAETTTVRSQPVILKSIT
                     NLSRYEAASGSFEVVVDLTKRTSLIPSFLAGSETLFIGQGTDIAFVDFATLKNTAIAV
                     NKDRTSVTVTLPKPQLEPAVLNVSQSYVYAQQQGLFNRIGNFFSGNPNSQQQVYQIAQ
                     QKIQTAARQSPLLTDAQKNTAGMLTGMLTSLGFQHVTVTFGAAPAR"
     gene            940..1101
                     /locus_tag="VFD73_12855"
     CDS             940..1101
                     /locus_tag="VFD73_12855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74886.1"
                     /translation="MLVLLAIVVLVILSLMFGGFQKGTKSGSLGGGLGPLVTACAACA
                     STALTSGSG"
BASE COUNT          227 a          426 c          465 g          285 t
ORIGIN      
        1 aagaccgcac ttggcggcgg cctcgccgat gctccaggtc gtcacgctac gagcgtatga
       61 gttagagtgc gctctaacgc aaaccggctg ggctagcggg ctggcgcggc gccgaacgtc
      121 acggtgacgt gctggaagcc gagcgatgtc agcatgccgg tcagcatccc cgcggtgttc
      181 ttctgcgcgt cggtcagcag cgggctctgc cgggccgcgg tctggatctt ctgctgggcg
      241 atctggtaca cctgctgctg gctgttcggg ttgccggaga agaagttgcc gatgcggttg
      301 aacaggccct gctgctgggc gtacacgtac gactggctga cgttcagcac ggccggctcg
      361 agctgcggct tcggcagcgt cacggtgacg gaggtgcggt ccttattgac cgcgatggcc
      421 gtgttcttga gcgtggcgaa atcgacgaag gcgatgtcgg tgccctgccc gatgaacagc
      481 gtctcgctgc ctgccaggaa cgaggggatc aggctggtcc gcttggtcag gtcgaccacg
      541 acctcgaacg agccgctggc cgcctcgtag cggctgaggt tggtgatcga cttcaggatg
      601 accggctggc tgcggacggt ggtggtctcc gcgaacgggt tccgcaactg cggcagcagg
      661 tggaccgcgg agagcaccac gatcagtacg atcgcggcca cgatcgccgc cacgattccg
      721 cccactctcg gcatgcgtgg catggttctc ctcgcgtttg cgccctcggc tggctaagga
      781 gcttgacgag tcactgagct acccggatcg gttcagataa ttcggcgcgg ccggcatatt
      841 gcgctgtgcc tgggcatacc catcggtatg tataggtcta ggggcccgcg gcgcccgcag
      901 cgccgccgct ggccgcaatc gcgggcaggc ggatgcctgg tgctggtact gctggcgatc
      961 gtggtgctgg tcatcctttc gctgatgttc ggcggcttcc agaaaggcac caagtcgggc
     1021 agcctcggcg ggggcctggg cccgctggta accgcgtgcg cggcttgcgc gtctaccgcg
     1081 ctcacctccg gctccggcta gggctccggc tccggctccg gctagacgac gtgatgcgat
     1141 gtcccggtga cgacctcatc agccccggaa gtcacatcgc tcacgcagcg cgcgtaacca
     1201 tttatgatcg cgaaggcttt actttattca gtagtaaagc attcgggatc atggaaattc
     1261 atacccatga tcacgaatgg ttttatctgc ctggactaaa atagccttcg cgatcatgaa
     1321 acgcctggtc gtggcgttga gcccggaaat cacaccagtc tccgcaggct cattctcccc
     1381 gcacttacat tgtcgtggat tgt
//
LOCUS       DASRPQ010001125         1110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2026923, whole genome shotgun sequence.
ACCESSION   DASRPQ010001125 DASRPQ010000000
VERSION     DASRPQ010001125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2026923"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..568)
                     /locus_tag="VFD73_12860"
     CDS             complement(<1..568)
                     /locus_tag="VFD73_12860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74887.1"
                     /translation="MPIVELAASIGGQKAAKALQPLLRDLLDIQDQQLERLRAVQDDV
                     RKLVEGPWRRARTALEDAQSSDGSRQKELLQRAESALQEAHSQEAKANAARAAAAADL
                     ALVTSLLGHRDEGQKWARRAHQDGQQAILAEIPEVTRALNARGNPFSRAADGMRWSHD
                     KKYFRWPTRSEANKYAKAEMDASMWRQAF"
BASE COUNT          195 a          365 c          320 g          230 t
ORIGIN      
        1 tgaacgcctg ccgccacatg ctggcatcca tctccgcctt ggcgtacttg ttcgcctccg
       61 agcgggtggg ccagcggaag tacttcttat catgtgacca acgcatccca tcggccgctc
      121 gggagaacgg attgcccctg gcgttgagag cgcgggtcac ctccgggatc tctgccagga
      181 tggcctgttg cccatcctgg tgagcccgcc gcgcccattt ctgcccttcg tcgcggtgcc
      241 ccagcaggct agtgaccagc gctaggtctg cggctgctgc cgctcgcgcc gcattcgcct
      301 tagcctcctg ggaatgcgcc tcttgcaggg cggattcggc ccgttgcagc aactccttct
      361 gacgcgatcc gtccgagctc tgcgcgtctt cgagcgccgt acgggctctg cgccaaggac
      421 cctcgacgag cttgcgaacg tcgtcttgca cggcgcggag ccgctcaagt tgttggtcct
      481 ggatgtccaa taaatcccgc aacagcggtt gcagcgcttt ggctgctttc tggccgccaa
      541 tcgacgcagc caactcgaca atcggcatca ggccctcctg tccacgcgcc attgtcgcag
      601 atcaatagcg gcttcccctt tccctgtctc cggaaccacg ccgcccgcct ggccggcaat
      661 atgagcccag cctcaacgag gtcgcgccaa ggattactcc gtcatgtacc tggcaatcgt
      721 cagaccttca atgttctgtg agttgataaa tgtaaccggc atacgcatca gcgtcccagg
      781 cgtaccaccc gcaggtccag cgtgtggaaa tggcatggaa gcggtgtgga gaccgcgtgg
      841 agaccgtgtg agatcatccg attccacgat cgtccggagt ctaggaaatg atcgtccagt
      901 ccggtgcctc gacttacgag cgaccggtcg acggcacgat tattcattgc tatttggcgc
      961 cacgaacata ctctcatgac cctataaggg ccgggcctct tcccagctca gcccggtagc
     1021 aggaagctcc gggtgagaag ttccgagctc gggagaggag acccggcaat gtctgtttac
     1081 gtcggcatcg atgtgcaccg caagcggtcc
//
LOCUS       DASRPQ010001126         1234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_448137, whole genome shotgun sequence.
ACCESSION   DASRPQ010001126 DASRPQ010000000
VERSION     DASRPQ010001126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1234
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_448137"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1222
                     /locus_tag="VFD73_12865"
     CDS             <1..1222
                     /locus_tag="VFD73_12865"
                     /inference="COORDINATES: protein motif:HMM:NF023367.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3459 domain-containing protein"
                     /protein_id="HZI74888.1"
                     /translation="FTERHHTPWGAAVNYDAQGSSTVRELVIENALYWLEEFQFDGLR
                     LDAVHSIIDESPKDLLEELAVRCRGAHPERHIHLILENEDNDPDRLIRSAHGRPLRYT
                     AQWNDDLHHCLHVISTGETAGYYGDYRQPVAQLGRTLAEGFAFQGEQMAYSGRRRGRP
                     SAHLPPTAFVAFLQNHDQVGNRAFGDRLHHSAPPAAFRAAASIYLLSPQIPMLFMGEE
                     WMASAPFPFFCDFGPDLAKAVTNGRREEFSRFPEFKDPERRRQIPDPSACETFNSAKL
                     DWNELTRSPHAEARRWYSEILAVRQGEICPLLPLISAGAGTYEAFAPAGLLVRWTLVN
                     GSELQLVANLSPASVNLDIESGRVIWREGEAQPRELGPWSTLWQVVTSTDPGLLQDLS
                     SGSTRRAKASMNSR"
BASE COUNT          237 a          387 c          375 g          235 t
ORIGIN      
        1 attcaccgaa cggcatcaca cgccatgggg agcggccgtg aactatgatg cccagggcag
       61 cagcacggtc cgtgagctcg tcatcgagaa tgctctctat tggctcgagg agttccagtt
      121 cgacgggctg cgcctcgatg ccgtgcacag catcatcgac gagagtccaa aggatcttct
      181 cgaggaactc gcggtgcgct gtcgcggggc ccatcccgag cgccacattc atctcatcct
      241 ggaaaatgaa gacaacgacc cggataggct gatacggagc gcacacggcc ggccactccg
      301 atatacggct caatggaatg atgacctgca tcactgcctc cacgtcatca gcaccgggga
      361 gaccgcgggc tattatggcg actaccgcca gcccgttgcc cagctcggaa ggaccctggc
      421 cgaaggcttt gcctttcaag gtgagcagat ggcctatagc ggccggcggc gcggccgccc
      481 cagcgctcat cttccgccga cagccttcgt cgcctttctg cagaaccatg atcaggtcgg
      541 caaccgtgcg ttcggcgatc ggctgcatca ttcagcaccg cctgcggcat tccgcgcggc
      601 cgcaagcatc tatcttcttt ctccccagat acccatgctg ttcatgggcg aggagtggat
      661 ggcctctgct ccttttcctt tcttctgcga ctttgggcct gaccttgcca aggcggtgac
      721 gaacggaaga agagaggagt tctcccgctt tccggagttc aaggacccgg agaggcggcg
      781 gcagatcccg gatccatcgg cctgcgagac cttcaattcg gccaagctcg actggaacga
      841 actgacccgc agccctcatg ccgaggctcg tcgctggtat tcggagatcc ttgccgtacg
      901 gcagggcgag atttgcccgc tgcttccgct gatcagcgcg ggggccggga catatgaagc
      961 tttcgcaccc gccggcctgc tggttcggtg gacactcgtg aacggcagtg agctgcagct
     1021 cgtggcaaat ctatcgcccg cttcggtcaa tctggatatc gaatccgggc gggtgatctg
     1081 gagagagggc gaggcacagc cgcgagaact cgggccatgg agcacgcttt ggcaggtcgt
     1141 gacgagcact gaccccgggc tgcttcagga tctaagctca ggaagcacac ggcgtgcgaa
     1201 ggcctcgatg aattcccgct gattgcgacc gacc
//
LOCUS       DASRPQ010001127         1129 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3590428, whole genome shotgun sequence.
ACCESSION   DASRPQ010001127 DASRPQ010000000
VERSION     DASRPQ010001127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3590428"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            366..>1129
                     /locus_tag="VFD73_12870"
     CDS             366..>1129
                     /locus_tag="VFD73_12870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HZI74889.1"
                     /translation="MWADYKNRRTVATLAGLLRLTLDIRRCHNADCQRYRKPYRPEAE
                     GYYALPQHEFGLDVIALVGNLRYGEHRSTPETHQALRRRSLDIAPRTVINLLDRYDEL
                     LAVTLTDDRRLRGLLVEQGRVILALDGLQPDVGHEVLWVLRDCISGEILLAKSLLSAR
                     QQDLAELIGQVRDGLTVPIVGVVSDGQHSIRKAVAQALPGVPHQLCHFHYLREAARPL
                     YEADRHAKKELKKRVRGVRPLERSLEGRAASASASDR"
BASE COUNT          206 a          414 c          315 g          194 t
ORIGIN      
        1 gccgcatcca ggcgcttttg gccaagcaga aactgacgcc ggagaagctc tatcaccaac
       61 tctccaccct cggcatcctc cgctcaggcg acagccgctc cagttagcga cgacgacgcg
      121 ccgccatagt ccattcccag ggcaacgcgc cgtcctttcc cccatcgcgg cacggtgcgc
      181 gaatagtttc tgtatttttt tctaggacag caaagttgac tggacgatga agctggctct
      241 gggttaggat ttacacttcc tcaaccatgg agacagctat ggccaggacg gcagcacggc
      301 cccaaccctc acgcaccgaa cacctccaac cctggttctc ccattgcacc gcctgcggac
      361 agcgtctgtg ggccgactac aagaaccgac gtaccgtcgc cactctcgcc ggactgctcc
      421 gcctcacgct cgacatccga cgttgccaca acgccgactg ccaacgctac cgcaagccct
      481 accggcccga agccgagggc tactacgcgt taccccaaca tgagttcgga ctcgacgtca
      541 tcgctctggt cggcaatctc cgctatggcg aacaccgcag cactcccgag acccaccagg
      601 ccctccgccg ccgcagcctg gacatcgccc cccgcaccgt catcaacctg ctggaccgct
      661 acgacgagct gctggccgtc accctgaccg atgatcggcg tctgcgtggc cttttggtcg
      721 agcagggccg cgtcatcttg gctctggatg ggctgcaacc ggacgtcggc cacgaggtgc
      781 tctgggtgct gcgtgactgc atcagcggcg agatactgct ggccaaaagc ctgctctccg
      841 cccggcagca agacctggcc gagctgatcg gccaggtccg cgacggtctg accgtgccga
      901 tcgtcggggt cgtctccgat ggccagcatt ccatccgcaa ggcggtggcc caagccctgc
      961 ctggcgtgcc gcatcaactc tgccacttcc actacctgcg tgaggcggcc cggccgctgt
     1021 acgaagccga ccgccacgcc aagaaggaac tcaaaaagcg tgtccgcggc gtgcggcctc
     1081 tggaacgttc cttggaaggg cgggccgctt ccgcctcggc gtcggaccg
//
LOCUS       DASRPQ010001128         1046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3590454, whole genome shotgun sequence.
ACCESSION   DASRPQ010001128 DASRPQ010000000
VERSION     DASRPQ010001128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3590454"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            15..449
                     /locus_tag="VFD73_12875"
     CDS             15..449
                     /locus_tag="VFD73_12875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74890.1"
                     /translation="MVTLIAAVIAAIVATIGYAVTVRAKLLEDRRKTYADALAAVHAY
                     QSLPHRIRRRDDGSSEAASLGHEISTIQQNLDYYRNLLYLDSPELGDGYTALVQASRD
                     QGKKYRDQAWERPPALSYPETYRYKVTDEMNLCLRRMRRHLR"
     gene            614..>1046
                     /locus_tag="VFD73_12880"
     CDS             614..>1046
                     /locus_tag="VFD73_12880"
                     /inference="COORDINATES: protein motif:HMM:NF013698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI74891.1"
                     /translation="MTIVGGLDIHRKQLTFDYVEVETGRLQRGRIAPADRAHLAAWLA
                     RFEEQSPVAFAVEAGTGWRYVAEEMRNAGVEVHLAEPADTSALRGPKRRAKTDKADAQ
                     LLRELLTAGRVPECYIPPASVLEWRALLELYHDLRFEHTGWA"
BASE COUNT          191 a          303 c          359 g          193 t
ORIGIN      
        1 aatagttggc tgatgtggtc accctcatcg ctgcggtcat agccgcaatc gtggcaacga
       61 ttggctacgc cgtaaccgtc cgggcaaagc ttctcgagga cagacggaaa acctacgcgg
      121 acgcactcgc ggcggttcat gcttaccagt cgttgcccca tcgcatccgt cgacgggatg
      181 acggcagttc ggaggcagcc tccctcggtc acgaaattag cacaatacag cagaatctcg
      241 actactaccg gaaccttctt tatctcgatt cgccagagtt gggtgacggg tataccgctc
      301 tcgttcaagc atctcgcgat caaggcaaga agtatcgtga ccaggcatgg gagaggccac
      361 ccgcattgag ctaccccgag acgtatcggt acaaggttac cgatgaaatg aatttgtgcc
      421 ttcgacggat gcggcggcat ttgagatgac atgcatcggc tccgcgtggt gtaaccgtgg
      481 agccggcggg ccggtggtct ggtcttgaca ggctggcgtt ttggggggcc tcctcggctc
      541 aggcgcacag ccgggagcgt cgagctctcg ggtgcgttgg acgtccatgg tcacggagct
      601 cgaggaggac ccggtgacaa tcgtaggcgg cttggacatt catcggaagc agttgacgtt
      661 cgactacgtc gaggtggaga cgggccggtt gcagcggggc cggatcgcac cggctgatcg
      721 tgcgcacttg gcggcctggc tggctcgctt cgaggagcag agcccggtcg cgttcgcagt
      781 ggaggccggt accggctggc gctacgtcgc ggaggagatg cgcaacgccg gcgtggaagt
      841 gcacctggcc gagccggccg atacatcggc gctgcgcggg ccgaagcggc gagccaagac
      901 ggacaaggcc gacgcccagc tgctgcgtga attgctcacc gcgggtcggg tgccggagtg
      961 ctacatcccg ccggcatcgg tgctggagtg gcgggccctg ctggagctct accacgacct
     1021 gcgcttcgag cacactggtt gggcgc
//
LOCUS       DASRPQ010001129         1125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4534004, whole genome shotgun sequence.
ACCESSION   DASRPQ010001129 DASRPQ010000000
VERSION     DASRPQ010001129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4534004"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            646..867
                     /locus_tag="VFD73_12885"
     CDS             646..867
                     /locus_tag="VFD73_12885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74892.1"
                     /translation="MAEIALRVRLIGGDHVDVTYSDGDAAEDKLVQHVISTLAEDGGV
                     LRCKHGDRLIVLYGRGVATVEVAPRGAIL"
BASE COUNT          204 a          358 c          362 g          201 t
ORIGIN      
        1 gagcacggca aagccgatcg ggagcgtgag ctggcagacc gcgaggcccg ggacgcggaa
       61 accggacccc cgcgagccag cggcgggcat gaagagccat catcagatcc gtagcaggat
      121 taaggttgtc cagaccagtc cgcacctatc agacaggcct gcttgcaggg ggcggcggac
      181 agttgcctgg tccagctgca tccggggccg tccacagctg ttgttaccaa atccgttagc
      241 aagatcaggc ccgctgaccc ctcgcttgta aggggagcta agttaatatt cggcggattt
      301 acggcatgac ctacctatct gactgcccgt acggcaccgc aatttaccgc tcggtgccgt
      361 ggctaatggc atgctaatgg cacggcgacc ttccgcgctg aaccggcggt ggcgatgatc
      421 gatccccgcc ggttcgtgcc gtaatgcaac aggccttgag tgcaaattct ttccgcagaa
      481 cgtactgtgg tccaactcac ggcatcacca agggcaccgg ggcagccggg acaggatagc
      541 tgggacgcgc aatgaccgcg ccgatgcgca tgagttgctg cggcagccct gggaggcgcg
      601 cgtatgcttg gcggccgagc cgggaagcgt ctaaggtgcg tgaccatggc agagatcgcc
      661 ctacgggtcc gcctcatcgg cggcgaccac gtggatgtca cctacagcga cggggatgct
      721 gccgaggaca agctcgtgca gcacgtcatc tcgaccctgg cagaagatgg cggggtactg
      781 cgctgcaagc acggcgaccg gctcatagtg ctctacggca gaggcgtcgc caccgtcgag
      841 gtggccccgc gcggcgcgat cctgtagttc gtgcccccgg cgagttcagc cggactgccc
      901 ggcaggaacg ggatagcccg tcatgaacca ccccgttccg gtcttgcggc gccggtcgga
      961 tcgggcaagt tccgggggag gccacccata cttccacccg catgcctctg acctcctaac
     1021 ccgtacattc ctgtgcggcc gtccggccct gttcagatcg gttcatgacc tcggtttctt
     1081 ctctcccggt tgtccatgct ggtccgtggg acccggaagt tgttc
//
LOCUS       DASRPQ010001130         2304 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_134904, whole genome shotgun sequence.
ACCESSION   DASRPQ010001130 DASRPQ010000000
VERSION     DASRPQ010001130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2304
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134904"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..386)
                     /locus_tag="VFD73_12890"
     CDS             complement(<1..386)
                     /locus_tag="VFD73_12890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI74893.1"
                     /translation="MAGEYIFTMRDLRKVVPPSREILKGIYLAFYPGAKIGVLGANGA
                     GKSTLLRIMAGVDQDFLGDARPLPGTKIGYLPQEPSLDPTKDVRGNVVEGVREQQGLL
                     DQFNQLSARFAEPMDDDEMNRLLEKQG"
     gene            complement(458..688)
                     /locus_tag="VFD73_12895"
     CDS             complement(458..688)
                     /locus_tag="VFD73_12895"
                     /inference="COORDINATES: protein motif:HMM:NF014279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIB/MDM2 domain-containing protein"
                     /protein_id="HZI74894.1"
                     /translation="MRPLQPSSQLAAVVGNSPMPRTQVISKLWAYIKRNGLQDAKNRR
                     AINADEKLRPLFGGRSQVTMFDLAKIANRNLS"
     gene            1062..2300
                     /locus_tag="VFD73_12900"
     CDS             1062..2300
                     /locus_tag="VFD73_12900"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HZI74895.1"
                     /translation="MTPSVLLRICPLALAPVLLGLSAHPAAKPSCDADNGGLVLPQGA
                     CAMLVASNVGSVRQLTVSSTGDLYAAVSSGGAGVLALRDTNGDGKPDMRATFGPSGAN
                     DVELRNGYLYVALSTRVLRYRIPEGQLKPSGDEEVVVSDLPGNSGHRAKSLAFGPSGE
                     MYVSVGSATNSCQEADRQNRSPGKDPCQELERRAGIWQFSADRIGQRFQDGQRYATGM
                     RNPLAITTHNGGSELYAAIHGRDQLGDNWGFSAERNADNPAEELVRVERGDDFGWPYC
                     YYSNEFKKKVLAPEYGGDGQKVGRCASAKDPLLAFPGHWAPLALAFYDADQFGPKYRG
                     GLFVAFHGSWNRAPLPQAGYRVVFVPFSGGKPSDTYSTFAIAREGPTSLRASGLAVGP
                     DGSLYISADANEKIWRVMRQ"
BASE COUNT          414 a          706 c          733 g          451 t
ORIGIN      
        1 ccctgcttct ccagcaggcg attcatctcg tcgtcgtcca tcggttcggc aaaccgcgcg
       61 ctgagctggt tgaactggtc cagcaatccc tgctgctcgc ggacgccttc gacgacgttg
      121 ccccggacat ccttggtcgg atcgaggctg ggctcctgcg gcagatagcc gatcttggtg
      181 ccgggcagcg gacgcgcatc gcccagaaag tcctggtcta ctccggccat gatccggagc
      241 agggtcgact tgcccgcgcc attggcaccg agtacaccga tcttggcgcc cggataaaac
      301 gcgaggtaaa tgcccttgag gatttcgcga gagggaggca cgaccttccg gaggtcgcgc
      361 atggtaaaga tgtattcgcc ggccataggc cgtggaacat aatcacaaaa caaaagggcg
      421 ccccagcggg ggcgccctcg taccgcggca aagtcggcta gctgagattc cggttagcga
      481 tctttgccag atcgaacatg gtgacctgac tcctgccacc gaacagcggg cggagcttct
      541 cgtcggcatt gatcgcccga cggttcttgg catcctgtag accgttccgc ttgatgtacg
      601 cccacaactt gctgattacc tgggtgcggg gcatggggct gttgcccacg accgcggcaa
      661 gctgcgagct gggttgaagg ggtctcatga atgcgggatt gggggcgcgc ttcctaccgg
      721 aggatgactt tcttctgctg gtcttcttgg cggctttctt tcgtgcggcc ggccgtcgcg
      781 ccgacttctt actggacttt tttctaccgg cagtctttct cctagtggtg gccatcgcga
      841 gtctcccagt tgagtgagaa ccgtgcgtgc ctcgggacca gcaaaactac cgtgtcaaac
      901 agtacacaga ccgcgcccag ttgcaatagg caaaatcgaa tttcccctct ggaaatcgat
      961 ttcagtccac gctgctgagg ctcaaatccc gagcggagcg ctgtattttc cgaggtgctc
     1021 atgctgcggt atgccgtatt ccttcttctg gtgacctccc catgacccca tcggtactcc
     1081 tccgaatctg tccgctcgcc ttggcaccag tcctcctcgg cttgtcggcg catcccgctg
     1141 ccaagcccag ctgtgatgcc gacaacggtg gcctggtgct tccgcaggga gcgtgcgcga
     1201 tgctcgttgc cagcaatgtg ggctcggttc gccagctcac cgtctcgtcc accggcgacc
     1261 tctacgccgc cgtgtcctcc ggcggggcag gggttctggc gctccgcgac accaatggcg
     1321 acgggaagcc agatatgcgg gccaccttcg gcccgagtgg ggccaacgat gtcgagctcc
     1381 gaaacgggta tctctacgtc gccctgagta cccgggttct ccgctaccga attcccgagg
     1441 gccagttgaa accctcagga gacgaagagg tggtcgtgag cgatctgccc ggcaacagtg
     1501 gtcaccgggc aaagagcttg gccttcggtc cgagcggcga gatgtacgtg agtgtcggat
     1561 cggcaaccaa cagctgccag gaggccgatc ggcagaaccg ctcgccaggc aaggatccct
     1621 gccaggagct ggagcgccgg gcgggaatct ggcagttctc agccgaccgc atcgggcagc
     1681 gcttccagga cggccaacgg tacgcgaccg gaatgcggaa tccgctggcg atcaccacgc
     1741 acaacggggg cagcgagctg tatgccgcca tccacgggcg agaccagttg ggagacaact
     1801 gggggttcag cgcggaacgg aacgccgaca atccggcgga ggagctggtc cgggttgaac
     1861 ggggcgatga ctttgggtgg ccctattgtt actacagcaa cgagttcaag aagaaagtgc
     1921 tcgcccccga gtacggggga gatggacaaa aggtgggccg ctgtgcgtcg gccaaagatc
     1981 cgctcttggc gtttcccgga cactgggctc cgctggcgct ggcgttctat gacgccgacc
     2041 agttcggtcc gaagtatcga ggcgggttgt tcgtggcctt tcatggctcg tggaaccggg
     2101 cgccgctccc ccaggcgggc taccgagttg tgttcgtccc gttcagcggg gggaaaccga
     2161 gtgacaccta ctccaccttt gcgattgccc gggaaggtcc cacctcgctt cgggcgagtg
     2221 gcctggcggt cggcccagac ggctcactgt atatctcggc ggacgcgaac gaaaagatct
     2281 ggagagtgat gcgccagtaa ctcg
//
LOCUS       DASRPQ010001131         1405 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1711661, whole genome shotgun sequence.
ACCESSION   DASRPQ010001131 DASRPQ010000000
VERSION     DASRPQ010001131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1405
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1711661"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..520
                     /locus_tag="VFD73_12905"
     CDS             <1..520
                     /locus_tag="VFD73_12905"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HZI74896.1"
                     /translation="LLAGIMAVGPFVGASGAVLGVAVAFAMFWPDAELIVFPIPVPIK
                     ARTLVIGLVALDVIGSRLWPGDGIAHIAHVGGALFGYLFFRVQSLSRRAPAQPARAVE
                     RVVMVQSGSAESDRRTPVTPMRPRRRVDSDPVAAEVDRVLDKISEKGISSLTPAERRF
                     LDEVARKKKHDH"
     gene            568..>1405
                     /locus_tag="VFD73_12910"
     CDS             568..>1405
                     /locus_tag="VFD73_12910"
                     /inference="COORDINATES: protein motif:HMM:NF021537.4"
                     /note="predicted Zn-dependent protease with a strongly
                     conserved HExxH motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2268 domain-containing putative Zn-dependent
                     protease"
                     /protein_id="HZI74897.1"
                     /translation="MLINLLPDFFAVLESADREAAYRQYRESHRPILDAYWRNYVLDP
                     DTPHADSIVSSALRADRSDLYGLAATTDLVQLSEEAIARAGEIMGIDRPTDTYLMVGL
                     GGANAGELVVGGRGVAFICLEHFTGRVNPETYGMGLPPDLIPVWIAHELAHTVRYTSP
                     LSASDMRRLVSENGGNYDYWATGSRATLRELLVNEGLAVHAAQAVAPGFDAADYFGYP
                     RRQYHRLREMESFLRRVAEPDLDRAGLGLRLRYLSGGMSPSARLIGGRVIPERAGYYL
                     GYR"
BASE COUNT          223 a          473 c          444 g          265 t
ORIGIN      
        1 gttgctggcg ggcatcatgg cggtaggccc gtttgtcggc gcctccggtg ccgtccttgg
       61 cgttgcggta gccttcgcca tgttctggcc cgacgcggag ctgattgtgt tccccatccc
      121 ggtgccgatc aaggcccgga ctctcgtgat tggcctggtg gcgctcgatg tgatcggctc
      181 ccggctctgg cccggtgacg ggatcgccca catcgcgcac gtcgggggcg cgttgttcgg
      241 ctacctgttc ttccgagtcc agtcgctgtc tcggcgggca ccggcccagc cagcccgcgc
      301 ggtcgagcgc gtggtcatgg tgcagtccgg atcggctgag tcggatcgga gaaccccggt
      361 cactcccatg cgacctcgcc ggagagtcga ttccgatccg gtcgcggccg aagtcgaccg
      421 ggtgctcgac aagatcagtg agaagggcat ctccagcctc accccggccg aacgtcgttt
      481 tctggacgag gtcgcccgca agaaaaagca cgaccactaa cggtcgccca ctcttgcgtc
      541 gatgcacgcg acttcttatc gtctcgcgtg ctgatcaatc tcctgccgga cttcttcgcg
      601 gtgctcgagt cagccgaccg ggaagccgcc tatcgtcagt atcgtgaaag tcaccgcccc
      661 atcctcgacg cctactggcg taactacgtt ctcgaccccg acacccccca cgcagactcg
      721 atagtcagtt cggcgctccg agccgatcga agcgatctct acggcctcgc cgccaccacg
      781 gatctggtcc agctctcgga ggaggcaatt gcgcgagctg gagagatcat gggcatcgac
      841 cgccccaccg acacctatct gatggttgga ctgggtgggg ccaacgccgg agagctggtg
      901 gtaggtggcc gcggagtggc gttcatctgc ctggagcact ttaccggacg ggtcaacccg
      961 gagacgtacg gcatgggcct gccgccggat ctgattccag tctggattgc gcacgagctg
     1021 gcccacaccg ttcgctatac ctcaccgctc agcgcgagcg acatgcgccg tttggtcagc
     1081 gaaaacggcg gcaactacga ctactgggcc accggcagcc gggcaacgct ccgggagcta
     1141 ttggtcaacg aggggcttgc ggtgcacgcg gcgcaggcag tggcgcccgg attcgatgct
     1201 gcagattact tcggctatcc ccggcgccaa taccaccggc tccgagagat ggagtcgttc
     1261 ctccgccgcg tggctgaacc ggacctggac cgcgccggac tcggcttgcg ccttcgctat
     1321 ctctccggcg gaatgagtcc ctctgcccgc ctcatcggcg ggcgagtcat tcccgagcgg
     1381 gccggctact acctcggata tcgaa
//
LOCUS       DASRPQ010001132         1306 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2028784, whole genome shotgun sequence.
ACCESSION   DASRPQ010001132 DASRPQ010000000
VERSION     DASRPQ010001132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2028784"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..335)
                     /locus_tag="VFD73_12915"
     CDS             complement(<1..335)
                     /locus_tag="VFD73_12915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74898.1"
                     /translation="MAEIVGLTAVQSSAITLVDDPATLRLSLSAAYNGKTKRVRNMPV
                     MPTVSPLARMAEVAADPDAYTLAWKQSHPGRKVAGVLPMNFPEELLHAAGFLPVVIQE
                     NSEPDSEGRV"
     gene            597..>1306
                     /locus_tag="VFD73_12920"
     CDS             597..>1306
                     /locus_tag="VFD73_12920"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HZI74899.1"
                     /translation="MSPEPGLLTESYWPAEEGGAVRDVTLGDLLREAAAVVPDRLALV
                     DGVEDQSARQEWTYAEFLQDAERAARALLKRFQPGDRVAIWAPNSAHWIILQQGISLA
                     GMILVAANPAYRSRELEHILSNSAAAGLFHVDSYRGLDLAAVVDELSPRLPALTDVVR
                     FSDWHQFLESGDPEQQLPAVSPLDPIQIQYTSGTTGFPKGALLHHKGLVNEAHFVALR
                     AGMSDGGVNINAMPMYHIG"
BASE COUNT          249 a          418 c          414 g          225 t
ORIGIN      
        1 acccgcccct ccgagtccgg ctcgctgttc tcctggatga cgaccgggag gaagcccgct
       61 gcgtggagca gttcttcggg gaagttcatc gggaggacgc cggcgacctt gcgtccagga
      121 tgggactgct tccaggcgag cgtgtaggcg tctggatcgg cggctacctc ggccatccgg
      181 gccagaggcg aaacggtcgg catcaccggc atgttcctca ctcgtttggt cttaccattg
      241 taagcagcgc tcaaactaag acgcaaggtt gccggatcat ccaccagcgt aatcgccgaa
      301 gactgcaccg cggtcagacc gacgatctcg gccacagaca aggggatgcc ggagtcggca
      361 agcgtttgcc gccgtcgccg cggcgagccc cggtgggctg ccgggtgagt accacaggcg
      421 agcctccgag gacggcatcc aggagaacgc cgagcgagca gaacgacggc gctccgcatc
      481 tttaagtgaa gaaaggatct tttggtctaa ccattgtaaa aatgatagct gaagcttaga
      541 ctccgcgtag cgcgtatacc gggcgacgaa caccaacgga ggtaccagga gtgaacgtga
      601 gcccagagcc cggcctgttg accgagtcgt actggccagc cgaagaaggc ggcgctgttc
      661 gtgacgtcac tttgggggac ctactgcgcg aggcggcggc ggtagtaccg gaccggctgg
      721 cactcgtcga cggcgtggag gaccagtcgg cacggcaaga atggacctac gccgagttcc
      781 tgcaggatgc cgagcgtgct gcgcgggccc tgctcaagcg cttccagccc ggcgatcgcg
      841 tggcgatctg ggcccccaac agcgcgcact ggatcatcct tcagcagggc atcagcctgg
      901 ccggaatgat cctggtggcg gccaaccccg cgtaccgcag ccgtgagctc gaacacatcc
      961 tcagcaactc cgcagccgcc ggcctgttcc atgtcgactc ctaccggggc ctggacctgg
     1021 cggccgtcgt tgacgagctc agcccacggc tacctgcctt gactgacgtc gtgcgtttct
     1081 ctgactggca tcagttcctg gagtccggtg atcccgagca gcagctgccg gcggtttcac
     1141 cccttgatcc catccagatc caatacacct ccggcacgac gggattcccc aagggtgctc
     1201 tgcttcacca caagggcctg gtcaacgagg cgcatttcgt cgcactcaga gccggcatgt
     1261 cggacggtgg cgtgaacatc aacgccatgc cgatgtatca catcgg
//
LOCUS       DASRPQ010001133         1046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2662839, whole genome shotgun sequence.
ACCESSION   DASRPQ010001133 DASRPQ010000000
VERSION     DASRPQ010001133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2662839"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..750
                     /locus_tag="VFD73_12925"
     CDS             <1..750
                     /locus_tag="VFD73_12925"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024783.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease signature motif containing
                     protein"
                     /protein_id="HZI74900.1"
                     /translation="IEVVPGRKIRYRCPNCGGTDFKYRSRQELAYRCAQCATEFDIRD
                     EEELEVQVFTANYSRTFRLADRPFPFKALDDAYVARSQQNAIRRLDVAVLRPVLEAHL
                     VTGEPWWQTHVREEERIPGGRGVGLSKTRVGQQRFREAMLDRFGEACAFTGPQPPGAL
                     QAAHLYLYSANPEHDLRGGLLLRCDLHALFDRWLITIDPGTWSIQIAPELKCYPGLAE
                     LDGRTVQLPDDLRPRLKYIQEHATLAHASWR"
BASE COUNT          190 a          332 c          330 g          194 t
ORIGIN      
        1 atcgaggtcg tgcctggtcg caagatcagg tatcggtgcc ccaactgcgg gggcactgac
       61 tttaagtacc gcagcaggca ggaattggcg tacaggtgcg cccagtgcgc taccgagttc
      121 gacatccgcg atgaagaaga acttgaggtg caggtattca cggcgaacta ctcccgcacg
      181 ttccggctgg ctgaccggcc attccccttt aaggcgctgg atgacgcgta cgtcgctaga
      241 tcccagcaga acgccatccg gcgcctggac gtggccgtcc tacggcctgt gctggaagcc
      301 catctggtga ccggcgagcc gtggtggcag acacacgtcc gcgaagaaga gcggattccc
      361 ggcggccgcg gcgtcggact gagcaagacc agggtcggcc agcagcgatt ccgtgaggca
      421 atgctcgaca ggttcggtga agcctgcgct ttcaccggac cgcagccacc cggggccttg
      481 caagcggccc acctctacct ctacagcgca aatcccgagc acgacctccg cgggggcttg
      541 cttctccgat gcgacctgca cgcactgttc gacaggtggc tcatcaccat cgaccccggc
      601 acctggtcaa tccagatcgc accagagctc aagtgctatc cagggctcgc cgagctggac
      661 ggcaggactg tccagttgcc cgacgacctg cggccacgac tcaagtacat acaagagcat
      721 gcgacgctcg ctcacgcgtc ctggagataa ctagctggac aagattcggc gtgagggtgc
      781 cttgaacccc aaccttctga tccgtagatt ccagagtggg tgtccggatt cgttcagatg
      841 ggttcgtgac ctcgggcttg tctcttccgg ttgtccggct gggtccgggc catccccaag
      901 ctgttcgtcc gtgtggctcc cagcgtggct cccaggaccg caccgcgggc gacccgttgc
      961 ttcgtcacag gtcggtttgc gcagcgggtc agcctgcttg tacgcaggtg aggcaacgtg
     1021 acgggtatcc gggagtgacc gtgggt
//
LOCUS       DASRPQ010001134         1120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4534431, whole genome shotgun sequence.
ACCESSION   DASRPQ010001134 DASRPQ010000000
VERSION     DASRPQ010001134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4534431"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            41..>1120
                     /locus_tag="VFD73_12930"
     CDS             41..>1120
                     /locus_tag="VFD73_12930"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZI74901.1"
                     /translation="MEVDVPRFLAGFSVRHAPQFEEWATELRRRLLRQYQDALGTLCR
                     EAMGQWRWRDAVGLADRWLASDPLSDEGIKLAIEARYLAGDRGAALARYRDYRATLLA
                     ETGCEPSRGLLNLVRRVESDSAPINARPITDEWYARAPSFEASLIGREKEWAALAKAW
                     KGVCRGGSRILLIEGEPGVGKSRLVEEFLRWIVAHEGIVLRGHGYDVRAGLPYEPVVE
                     MLRDALGTPGLAGTSPEWLSEAARLLPELRQRFPGLPEPPSSIDSSAGWRLFEGIAQL
                     VLAIAAEQPIAVSLDDLQWCDGDSCNLLRFLIRRSEAAPVLWVGSFTLGEVERNAPSA
                     RLCRVLRAKAHASVLPLGPLGEEDLW"
BASE COUNT          169 a          336 c          394 g          221 t
ORIGIN      
        1 cgagtttcgc gggcgcgtgc tgcaggagcc aaggcttgcg atggaggtgg atgtcccccg
       61 gtttctggct ggtttctcgg tccgccatgc cccgcagttt gaggaatggg caactgagct
      121 gcgccgacgg ctccttcgcc agtatcagga cgcattggga accctctgcc gggaggcaat
      181 ggggcagtgg cgctggcgcg acgcggtcgg actggcagat cgctggctcg ccagcgatcc
      241 actctcggac gaaggaatca aattggcgat cgaggctcga tatctggccg gtgatcgcgg
      301 cgccgcgctc gcacggtatc gggactatcg ggcgacgttg ttggctgaaa ctgggtgcga
      361 gcccagccgt ggtcttctga atctggttcg acgggtggaa tcggactccg ccccgatcaa
      421 cgctcgtcct atcaccgatg agtggtacgc cagagcgccc tccttcgagg cgagcctgat
      481 cggccgggaa aaggagtggg ccgcactggc caaagcctgg aaaggcgtgt gccggggcgg
      541 cagccgaatt ctgttgatcg aaggcgagcc gggcgttggc aagtcacgat tggtggagga
      601 gttccttcgg tggatcgtgg cgcacgaggg aatcgtgctc cggggccatg ggtacgatgt
      661 ccgtgcgggt ctgccgtacg agccggtcgt cgaaatgctt cgggatgcgc tcggcacccc
      721 cgggctggcc ggcacatctc cggaatggtt gagcgaagcg gctcgtctct tgcccgagtt
      781 acgccagcgc tttcccggtc tgcccgagcc tccctcctcc atcgatagtt ccgcgggctg
      841 gcgactcttc gaaggcatcg cgcaactggt gctggctatc gcagccgaac agccgattgc
      901 cgtgtcgctg gacgacttgc agtggtgcga cggggatagc tgcaacctgc tccggttcct
      961 gatccggcgc tcagaggccg cgccggtgct ttgggtgggc agttttaccc tcggtgaggt
     1021 cgaacggaac gctccctcgg ctcggctctg tcgcgttctc cgcgccaagg cgcacgcctc
     1081 agtccttccg ctgggcccgc tgggtgaaga ggatctctgg
//
LOCUS       DASRPQ010001135         1155 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_135370, whole genome shotgun sequence.
ACCESSION   DASRPQ010001135 DASRPQ010000000
VERSION     DASRPQ010001135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135370"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            154..849
                     /locus_tag="VFD73_12935"
     CDS             154..849
                     /locus_tag="VFD73_12935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74902.1"
                     /translation="MPAVSIAALRELIEQRFPDATPANWRAAEPVVTGVGPLDRILPG
                     GGLPRGQLTVWSPQGGACSMLRAACRATVANGERSVWIDTAGTVVGAFWEEGPYLIQP
                     KSRKDALKGAEELLRCGGFALVVLDGTEPEGTETVRLTRAVREGGGAFVAITPNPSLA
                     KLRLESKILPHSYRWRHGPFDDPVDVQTATIQVRARAAGWNASADITVPITPHDVRLS
                     LEPRLADRRGLPR"
     gene            884..>1155
                     /locus_tag="VFD73_12940"
     CDS             884..>1155
                     /locus_tag="VFD73_12940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74903.1"
                     /translation="MVTEERRGGLVWVDARGLDAEQIARSALEVLRGLGLANVRVGIG
                     ETAIIAELVAGGSCWSLADAGGTELPSSSISQPQAPATSHQPAVIES"
BASE COUNT          190 a          328 c          409 g          228 t
ORIGIN      
        1 actcgctcct ccgcgccgaa caggacacag gtgtcggcaa ttcgctattc ttgatttcgg
       61 gatatgttcg gtataaagtc tgctcagctg ctcggctgta gagcaggcag tgcccgtcgt
      121 tcccgttttc gatggacgtc gccgacttcg ccaatgccag ctgtatccat cgccgccctc
      181 cgtgagctga tcgagcagcg ttttccggac gccacgccgg cgaactggcg tgcggcggag
      241 ccggtggtga caggggttgg tccactcgac cggatccttc cggggggcgg gctccctcgg
      301 ggacaactga cggtgtggag tccacaaggt ggcgcctgtt cgatgctgcg agcggcctgt
      361 cgcgcgaccg tcgcgaacgg cgaacgatcg gtgtggatcg acacggcagg aactgtcgtt
      421 ggggcttttt gggaagaggg tccctatctc attcagccca agagtcgaaa agacgcgctc
      481 aagggagccg aggagttgtt gaggtgcggc gggtttgcgt tggtagtgct ggatggaacg
      541 gaaccggagg gtacggagac ggtgcggctg actcgcgcgg tacgcgaggg cggcggcgca
      601 ttcgtggcca tcacgccgaa cccatcgctc gcgaagctgc gcctggagtc gaagatcctg
      661 ccgcacagtt atcggtggcg tcatgggccg ttcgatgatc cggtcgatgt gcagacagcg
      721 accattcaag tgcgtgcgcg ggccgcaggc tggaatgcca gcgcggacat cacggttccg
      781 ataacacctc acgatgttcg tctgtctctg gagccccgcc tggcggaccg tcgcggactc
      841 cctcgctgag ctgtcccctg cgctccttac ggttgcaccg cgggtggtca cggaggagcg
      901 tcggggtggg ctggtgtggg tggacgcacg aggtctcgac gcggagcaga ttgcgcggtc
      961 ggcgctcgag gtattgcgcg gtttggggtt ggcaaacgtt agggtaggaa ttggagagac
     1021 agccatcatc gcggagcttg tggctggtgg ctcgtgctgg tcgctggctg atgctggtgg
     1081 gacggagctg ccttcatcca gcatcagcca gccacaagca ccagccacca gccaccagcc
     1141 tgcagttatc gagtc
//
LOCUS       DASRPQ010001136         1080 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2663236, whole genome shotgun sequence.
ACCESSION   DASRPQ010001136 DASRPQ010000000
VERSION     DASRPQ010001136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2663236"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            110..630
                     /locus_tag="VFD73_12945"
                     /pseudo
     CDS             110..630
                     /locus_tag="VFD73_12945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612021.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
BASE COUNT          195 a          353 c          353 g          179 t
ORIGIN      
        1 agcgcatctg ctgcgccttg ttcatgcgct tagccacgat ctcattgatc gcgctctcca
       61 cgaacgccgt tgagattggc tctccgcgcc gacgtcgggc agcatagggc acctgaaggc
      121 ccagatcagc cgggagctcg accggctcga gctcctgatc gaacagatca aggccgtcga
      181 agccgagcgg gatgccgtgc tggcccaggc gcaggcgagc cccggcgtgc cagcgccagc
      241 ggcccagttg ctgacgctgc gaggcattgg acccgaggcg gccgccacac tctggtcgga
      301 gggcctgttc cgcagattca acgaccgaaa gcaggttgcg gcgggcaggc ccccacaccg
      361 tggcaaagcg gagcggtcca tcgggaccag ggcgtctcca aggccggcaa tccgcggctg
      421 cgaacgacca tgatccagat cgcttggctg tggctgcggc atcagccgca gtcagcgctg
      481 gcggtgtggt tccgcgcgcg gatcaagcgc acgggcggcc gtctcggcaa gacgatgatc
      541 gttgctctgg cgcgcaagct gctggttgcg ctctggaagt atgcgacggc cggcgtgctg
      601 atcgaggggg ccatcctcaa gcccgcctga gcatgctgct gccccctttc ctcctatctc
      661 ccggggcctg atcagccctg gcggatccag gtggacgaac cgcatcagcc catggcttgg
      721 ataagccgat cgaagagaag ggtctcgtcc tcctgagccc tcacccgacg caagcgggat
      781 ggtggtgcag ctgctccgcg cagcgaccga atgtgagttt gacctggtgc tggagccgga
      841 ccaggtcatg caacgggctt agaccttgga tcccgaacag ccaccaaagg aggcacccat
      901 gatgccgtaa tcatgaactt gactccgaaa tgcccatgtg aacgggctga tgcgcaccaa
      961 gcagcgctac cggtgtaaag cctgcggcct gaacttcacc gacacgccgc cccggggcaa
     1021 gccgctggcc ctgaaggtgg cggccgtgct gctctatgtc agcggtctct cgatgaaccg
//
LOCUS       DASRPQ010001137         1004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_764158, whole genome shotgun sequence.
ACCESSION   DASRPQ010001137 DASRPQ010000000
VERSION     DASRPQ010001137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_764158"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..342)
                     /locus_tag="VFD73_12950"
     CDS             complement(<1..342)
                     /locus_tag="VFD73_12950"
                     /inference="COORDINATES: protein motif:HMM:NF016430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor"
                     /protein_id="HZI74904.1"
                     /translation="MQAATYDRAISSPRARLMPVQSVDSGSAHSFRASTALEHNDRDP
                     EIARAVVRAQAGDMEAIRFLYLRYKNNVYGYVLSILRDQHEAEDVTQHVFMKLISVIP
                     KYEPRQVPFTSW"
     gene            793..>1004
                     /locus_tag="VFD73_12955"
     CDS             793..>1004
                     /locus_tag="VFD73_12955"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZI74905.1"
                     /translation="MLAERDAELAAIEHCLARARRGRGTTVFIEAAAGLGKSRLLTVA
                     GDLAREAGMQVSGAHSTRLEQDFPFGV"
BASE COUNT          181 a          313 c          326 g          184 t
ORIGIN      
        1 ccacgaggtg aacggcacct gccgaggctc gtacttggga atcacggaga tcagcttcat
       61 gaacacgtgc tgcgtgacgt cctcggcctc gtgctggtcg cgaaggatgc tcagcacgta
      121 tccgtagacg ttgttcttgt agcgcaggta caggaagcga atggcctcca tgtcccccgc
      181 ctgcgcccgc actactgcac gtgcgatctc gggatcgcga tcgttgtgct ccagcgcggt
      241 gctcgctcga aagctgtgag cggaacctga atcgaccgac tgaaccggca tgagacgggc
      301 cctaggcgat gagatggccc ggtcataggt ggctgcttgc atgagctggc taggatcgat
      361 ccggctggac gccggaggac cgctttgcct tcccccttgg tggtagttcg taaatccagc
      421 cccgaaggtc tggtgtcccc gccctcacat ccgtccaaga cgtgcgggca gggctaaagc
      481 tatctacgcc tagccatttc tcgcaccagg gggacccccc tagtctttac cgcccggcga
      541 cggaaagccc ctgactttcg gcacaaaccc agctaatcca ccgcaagaat cggcccatcg
      601 ctaaaggttt tcggcgccct tgacgatgcg tgaatgttgt gaaatgcggt tgcgccaggg
      661 atacccccct agtattttct ccgatcaagg agcccgcaat gacgcggtgc tggggctaag
      721 ggcataaagg ttgacttgtc cagagggcga actcagacgc gtagacgcgg tcgagccacc
      781 ggcctaggtg gtgtgctggc cgagcgcgac gccgagctcg cggcgatcga gcactgcctc
      841 gcccgggcgc gccgcggtcg cgggaccacc gtgttcatcg aggcggcggc cggactgggc
      901 aaatcccggc tgctcacggt ggccggagac ttggcccggg aggccgggat gcaggtgtcg
      961 ggggcgcaca gcaccaggct cgagcaggac ttcccgttcg gcgt
//
LOCUS       DASRPQ010001138         1095 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1712220, whole genome shotgun sequence.
ACCESSION   DASRPQ010001138 DASRPQ010000000
VERSION     DASRPQ010001138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1712220"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1095)
                     /locus_tag="VFD73_12960"
     CDS             complement(<1..>1095)
                     /locus_tag="VFD73_12960"
                     /inference="COORDINATES: protein motif:HMM:NF033517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HZI74906.1"
                     /translation="LHGEDPQPRRHQVAEIPPVPVDVTEYRLHRLTCTACGTRTCASL
                     PAGVPTGAFGPRLQALLAILAGGYRLGKRPIRQLAQDLFGLSISTGMVAKLERATADA
                     LAQPMAELEEYVRKQHANVDETSWREAMHKAWLWVVVTPLVTVFHIAGTRCGKVAAGL
                     LGSAYRHVVTSDRWKAYNGFRRRQYCWSHLRRDFQAMIDRQNSGTPIGKGLLELSDRM
                     FVWWHRVRDGTLTRSSFQVYISGLRAEVHEALIRGAGCGCPKTAATCRNLIAHESRLW
                     TFVWQEGVEPTNNSAERALRHAVLWRKGSGGTDSRDGSRFVERILSVRETCRQQGRGL
                     LEYLMGCCQAQLEGRAAPSLLPKGVCRLDVA"
BASE COUNT          203 a          372 c          331 g          189 t
ORIGIN      
        1 agccacatca agccggcaca cgcctttcgg caatagagag ggtgcggccc tgccttccag
       61 ttgggcctgg cagcatccca tcaggtactc caagaggcca cgcccttgct gacggcacgt
      121 ctcccggaca ctgaggattc gctcgacgaa ccggctgccg tcccgactat ccgtgccgcc
      181 gctgccctta cgccacagga cggcgtgtcg caaggcccgc tcggcggagt tattcgttgg
      241 ctcgacgccc tcctgccata cgaaagtcca cagccttgat tcatgggcaa tcaggttacg
      301 gcacgtcgcc gctgtcttgg ggcatccgca accagccccc cgaatcagtg cctcatggac
      361 ctcggcccgc aatccactga tgtagacctg gaagctggag cgggtcagcg tcccgtctcg
      421 aactcgatgc caccagacga acatccggtc ggatagctcc agcagcccct tcccgatagg
      481 cgtaccgcta ttctggcggt cgatcatcgc ctggaaatcc cgacgcaggt gcgaccagca
      541 atattggcga cggcggaacc cgttgtatgc cttccaccga tctgaggtaa cgacgtggcg
      601 ataggctgag ccgagcagcc ctgcagcgac cttaccgcag cgagtgcccg caatatggaa
      661 gaccgtcacc aggggcgtaa cgaccaccca caaccacgcc ttgtgcatgg cctctcgcca
      721 ggacgtttca tcgacattgg cgtgctgctt gcggacatac tcttccaatt cagccatcgg
      781 ctgggccaag gcgtcggcgg tggctcgctc cagcttggcc accatccccg tcgagatcga
      841 caggccgaag aggtcctggg ccaactgccg gatgggacgc ttccccaggc ggtagccccc
      901 ggccaggata gccagcaagg cttgcagccg agggccgaac gccccggttg gcacccccgc
      961 aggcagcgag gcacaggtgc gtgtgccgca ggccgtgcaa gtgagccggt gcaggcgata
     1021 ctccgtcaca tcgactggga caggtggtat ctcggcgacc tgatgcctgc ggggttgcgg
     1081 gtcttcgccg tgtag
//
LOCUS       DASRPQ010001139         1167 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1712420, whole genome shotgun sequence.
ACCESSION   DASRPQ010001139 DASRPQ010000000
VERSION     DASRPQ010001139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1712420"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..599
                     /locus_tag="VFD73_12965"
     CDS             <1..599
                     /locus_tag="VFD73_12965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HZI74907.1"
                     /translation="NDLIPGVRNEGDILVEGISVFSPATDLVSLRQRVGMVFQKPNPF
                     PKSVFENVAYGPSLNALVSRRDLPDLVERCLRQAGLWEEVKDRLDEPGTGLSGGQQQR
                     LCIARSLGNEPEVLLMDEPCSALDPIATQRVEELIFELKQHYTIVIVTHNMQQAARVS
                     DFTGFFHHGELIEFDETERLFTKPSDERTEAYITGRFG"
     gene            596..>1167
                     /gene="phoU"
                     /locus_tag="VFD73_12970"
     CDS             596..>1167
                     /gene="phoU"
                     /locus_tag="VFD73_12970"
                     /inference="COORDINATES: protein motif:HMM:TIGR02135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HZI74908.1"
                     /translation="MSVDVHRHFHDELSHVKVRLLTMSGEAEAALGLAVEALLERDSE
                     KAERVISGDRVIDAMEVEIEEQCVNLLALQQPMARDLRMLTSALKIANDLERVGDHAV
                     NIAQSAERLIQTRPIAPEPEIIEMARLARDMLSDALEAFIRGDAAAGREVCLRDDKVD
                     ALHTSVFRILLTHMMEDPHTIGAGMELFLV"
BASE COUNT          228 a          342 c          377 g          220 t
ORIGIN      
        1 tgaacgatct gattccgggc gtccggaatg aaggcgacat tctggtagag ggtatatcgg
       61 tgttcagccc cgccactgac ctggtatctc tccggcagcg tgtggggatg gtattccaga
      121 aaccgaatcc ttttcccaag agcgtgttcg agaatgtcgc atatgggcca tcgctgaatg
      181 ccctggtgag ccgccgggat cttcccgatc tggtagaacg gtgcctgcgt caggccgggc
      241 tgtgggaaga ggtgaaagac cggctggacg agcccggcac cgggctgtcc ggcggccagc
      301 agcagcgtct ctgcatcgca cgctcgctgg gcaacgagcc cgaagtcctc ttgatggacg
      361 agccgtgctc ggcgctggat ccgatcgcca cgcagcgcgt cgaagaactg atcttcgagc
      421 tgaaacagca ttacaccatc gtcattgtga cccacaacat gcagcaggcc gcgcgagtgt
      481 ccgactttac cggattcttc caccatgggg agctgatcga gttcgacgag accgagcggc
      541 tctttaccaa gccgagcgac gagcggaccg aagcgtacat cactgggaga ttcggatgag
      601 tgtcgacgtt catcgtcatt ttcatgacga gctgagtcac gtcaaggtcc ggctgctgac
      661 catgtccggc gaggccgaag ccgcactggg tctggccgtc gaggccttgc tcgagcgcga
      721 tagcgagaag gccgagaggg tcatctctgg cgatcgggtg atcgacgcca tggaggtcga
      781 gatcgaagag cagtgtgtga atttgctggc gctgcagcag cccatggcgc gcgatctgag
      841 aatgctgacc tcggccctca agatcgcgaa tgacctcgag cgagtgggcg accatgccgt
      901 caacatcgcg cagtcggcgg agcgcctgat ccagacccgg cccattgccc cggaacccga
      961 gatcatcgag atggcccgtc tcgcccggga tatgctgtcc gacgccctgg aggcgttcat
     1021 tcggggagat gcagccgcag ggcgagaggt ctgtctccgg gacgataagg tggacgcgct
     1081 ccacacctcg gtgttccgga ttctcctcac tcatatgatg gaagacccgc acaccatcgg
     1141 cgccggcatg gagctgttcc tggtcag
//
LOCUS       DASRPQ010001140         1171 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1393679, whole genome shotgun sequence.
ACCESSION   DASRPQ010001140 DASRPQ010000000
VERSION     DASRPQ010001140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1393679"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..405
                     /locus_tag="VFD73_12975"
     CDS             <1..405
                     /locus_tag="VFD73_12975"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HZI74909.1"
                     /translation="ALTDVGRLARWLGEFEGDLRLGGEFRARFFASGWEGTGRIEVCE
                     PPRHLLVMTRHDGQADEHAIEATLTADGDHTILILEERGMPVNLLAAYGAGIQVHIED
                     LAAHIAGQERCDAEARWGELQPAYEALASKLG"
     gene            627..>1171
                     /locus_tag="VFD73_12980"
     CDS             627..>1171
                     /locus_tag="VFD73_12980"
                     /inference="COORDINATES: protein motif:HMM:NF024635.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZI74910.1"
                     /translation="MSAVLITGMSGAGKSTIAEVLARRGLASLDADDDPLLARSVDSD
                     GNVVEDPPVPDFAWLSRHSWAWDPARLDVLIQTAAPATLYVCGGAANELELADRFTHV
                     FLLEMDEPTMLARLDASSRDNEWGRIGDTREHLRRRLPGHQDRLRAFGAIPIDAGQPL
                     DQVVDAILSHTLASSAISQAS"
BASE COUNT          203 a          389 c          390 g          189 t
ORIGIN      
        1 gcgctcaccg atgtcggccg cctggctcgc tggcttggcg agttcgaggg cgacctgcgc
       61 ctgggcggtg agttccgggc acgctttttc gccagcggat gggaagggac cgggcggata
      121 gaggtatgcg agcccccgcg gcacctgctg gtgatgacca gacacgacgg ccaagccgat
      181 gagcatgcca tcgaggccac gctgaccgcc gacggcgacc acaccatcct gatcctggaa
      241 gaacggggca tgccggtgaa cctgctcgct gcctacggag ccggaataca ggtccacatc
      301 gaagacctcg ccgcccacat cgccgggcag gagcgctgcg acgccgaagc gcggtggggg
      361 gagctccaac ccgcctatga ggccctggcg tccaagctcg gctagacact aggttgccat
      421 gcaagggcat gtgtctctgg gcgccgccga ccgctgatgc ttgccgtcga ctgctgctgt
      481 tgctgtcacc gttgctgtca gcggcagcca gagtgaccgc cggaagcgtt caggggatgg
      541 ccttcgtccg gtccgggcag gctgccgcct gagggcgcac caaactcgtt tgcgccgcct
      601 tcacggctgg ccgacgatag acaccgatga gcgcagtttt gatcacaggc atgtccggtg
      661 ccgggaagtc cacgatcgcc gaggtgcttg cccgccgggg cctggcatcc ctcgatgccg
      721 acgacgatcc tttgctcgcc cggtccgttg actccgatgg caacgtggtg gaagatccgc
      781 cagtcccgga cttcgcctgg ctttcccggc atagctgggc atgggatccg gcccgcctgg
      841 acgtactgat ccagaccgcg gcaccagcaa cgctgtacgt ctgcggcggt gcggcgaacg
      901 agctagagct ggccgatcgc ttcacccatg tgttcctgct agagatggac gagcccacga
      961 tgctggcacg actggatgcg tcaagccggg acaacgaatg gggtcgcatc ggggacactc
     1021 gcgagcacct acgccgcagg ctgccgggac accaggaccg cttgcgagca ttcggggcga
     1081 tccccatcga cgcagggcag cccctcgacc aggtggtgga cgcgatactc tcccacacgt
     1141 tggccagctc cgccataagc caagccagca a
//
LOCUS       DASRPQ010001141         2311 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3592118, whole genome shotgun sequence.
ACCESSION   DASRPQ010001141 DASRPQ010000000
VERSION     DASRPQ010001141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3592118"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..702
                     /gene="trpS"
                     /locus_tag="VFD73_12985"
     CDS             <1..702
                     /gene="trpS"
                     /locus_tag="VFD73_12985"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HZI74911.1"
                     /translation="ERMTQFKDKAQRFESVPAGLLNYPVLMAADILLYRADLVPVGDD
                     QIQHLELAREIARRWNAEFGRGEDFFPEPQPILTEAKRITGLDGQAKMSKSLGNTIGL
                     LDSPETIWQKLRPAKTDPARVTRHDPGNPEVCNIYHLHKYFSPPETVALVAENCSGAK
                     WGCLDCKRVLADNMIAALAPIRERALELQQRPDQVDQILADGASAARRIAMETLREVR
                     DRMGLLSLSQPLPRD"
     gene            726..1856
                     /locus_tag="VFD73_12990"
     CDS             726..1856
                     /locus_tag="VFD73_12990"
                     /inference="COORDINATES: protein motif:HMM:TIGR01420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HZI74912.1"
                     /translation="MTESNAHPRAQAGLEKIIKAAVERGASDLHIKAGDVFRARINGK
                     LVPLTKQRLTPDQTKSIAQKLMSSEEDRARIERMRDFDCSWGMPGVGRFRVNILRQRS
                     SFMIVMRVIPFTVPTIESLGLPEVLGQIAESDRGLVLVSGVSGSGKSSTIAAMVHHIN
                     RTLHKHIVTIENPIEFLHRDLNCSVTQREVGVDTKNLAIGFRAALRQDPDVVVLGDMA
                     DAAIMDTALMATEAGRLVIGTVSTPDVATTVERVIGTVPSAERDLGRLRFAESVRAII
                     SQQLLPSKNDDGRVPAVEILIATPAIRECLKDSERMSQLKRIMSDGRRDLGSQTYEQH
                     LEDLVETGHISEETRRLAQPRPDVKTTTVVYSRHGPGRTASR"
     gene            complement(1930..>2311)
                     /locus_tag="VFD73_12995"
     CDS             complement(1930..>2311)
                     /locus_tag="VFD73_12995"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI74913.1"
                     /translation="LGKRMAQNILVVDDEAVARRFLERALTEQGFRVMLACDGEEALD
                     LIRMTRRKIALIITDLVMPGMGGHAFALEVGRLPSPPPILYISAYERPEGEMAKRFLH
                     KPFSVEDLLTTVRNLIAPPQEVRS"
BASE COUNT          478 a          687 c          735 g          411 t
ORIGIN      
        1 gagcggatga cgcagttcaa agataaggcg caacgattcg agagtgtgcc cgccggactc
       61 ttgaattacc cggtgctcat ggcggcggac atcctgctgt atcgcgccga cctggtaccg
      121 gtgggagatg accagatcca gcacctggag ttggcccgag agatcgcccg ccggtggaat
      181 gcggaattcg gcaggggcga agattttttc cccgagccgc agccgatcct gaccgaggcc
      241 aagcgcatca ccggcctgga tgggcaggcc aagatgtcga agagcttggg gaacaccatc
      301 ggcctgctgg atagtcccga gaccatctgg cagaagctgc gcccggcgaa aaccgatccg
      361 gcccgcgtaa ctcggcatga tccggggaac ccggaagtct gcaatatcta ccacttgcac
      421 aagtacttct cccccccaga aacggtcgcc ttggtggcgg agaactgtag cggtgccaag
      481 tggggctgcc tcgactgcaa gagggtactg gccgataata tgatcgcggc cctcgcgccc
      541 attcgggagc gagccctgga gctgcagcaa aggcccgatc aggtggatca gatcctggct
      601 gacggcgcgt ctgcggcccg gcgcattgcg atggagacgt tgcgcgaggt gcgagaccgg
      661 atgggactgc tctccctgtc tcagcccctc ccgcgcgatt gaccgatggc acctggagtt
      721 tctaagtgac tgaatccaac gcacatccgc gtgcgcaggc gggtctggaa aaaatcatca
      781 aagccgccgt cgagcggggt gcctccgacc ttcacatcaa ggccggcgat gtcttccgtg
      841 cccgcataaa cggaaagctg gttccgctca ccaagcagag gctcaccccc gatcagacca
      901 agtcgattgc ccagaagctg atgagcagtg aagaggaccg tgcccggatc gagcggatgc
      961 gcgatttcga ctgctcctgg ggtatgccgg gggtcggtcg attccgggtc aacatcctgc
     1021 gtcagcgctc gtcattcatg atcgtcatgc gggtcattcc gtttaccgta cctaccatag
     1081 agtcgctcgg gcttcccgag gttctcggcc agattgcaga gtcggatcgc gggctggtgc
     1141 tggtgagtgg cgtgagcggc agcggaaaga gctcaaccat tgccgcaatg gtgcaccaca
     1201 tcaatcggac gctgcacaag cacattgtca ccatcgagaa cccgattgag ttcctgcatc
     1261 gggacctgaa ctgctcggtt actcagcggg aggttggggt agatacgaaa aacttggcaa
     1321 tcggcttccg cgcagcactg cgccaggatc cagacgtagt tgtgctaggt gatatggccg
     1381 acgctgccat catggacacc gccctgatgg caacggaggc ggggcgcctc gtgatcggga
     1441 cggtctccac acccgacgtg gccactaccg tcgagcgggt gatcgggacc gtccccagcg
     1501 cggagcgcga tcttgggcgg ctgcggttcg ccgagtcggt acgggccatc atctcgcagc
     1561 agcttctgcc cagcaagaac gacgatggcc gggtgccagc cgtggaaatc ttgatagcca
     1621 cgccggccat ccgcgaatgt ctcaaggatt ctgagcggat gagccagctc aagcgcatca
     1681 tgtcggacgg acgccgagac cttggttctc agacctacga gcagcatctg gaggatctgg
     1741 tcgagaccgg ccacatcagt gaggagacca ggcgtctggc ccagccacgg cccgacgtga
     1801 aaacgaccac cgtggtctat agccgacacg gaccaggtag aacagcgtcc aggtagccac
     1861 gaggtcggtg tccgacctag aggagactaa aattttggtg gagagggggc cttagagggg
     1921 aagagaggtc tacgagcgta cttcctgagg tggggcaatg aggtttcgca ccgtcgtcag
     1981 caggtcctca acggaaaacg gcttgtgaag aaaccgtttg gccatctctc cctcaggccg
     2041 ctcgtaggct gagatgtaga ggataggcgg aggtgacggc agccggccca cctccagggc
     2101 aaaggcatgg ccgcccatgc cgggcatcac gaggtcggta atgatgagcg cgatcttacg
     2161 ccgggtcatg cggatcaggt cgagggcctc ctcgccatca caggcaagca ttacccgaaa
     2221 tccctgttcc gtcagggctc gttccaggaa tcgccgggcg acagcctcgt cgtccaccac
     2281 caggatattc tgcgccatcc ttttccccag c
//
LOCUS       DASRPQ010001142         1018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3287756, whole genome shotgun sequence.
ACCESSION   DASRPQ010001142 DASRPQ010000000
VERSION     DASRPQ010001142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3287756"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..666)
                     /locus_tag="VFD73_13000"
     CDS             complement(<1..666)
                     /locus_tag="VFD73_13000"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HZI74914.1"
                     /translation="MPGLDSIDHVVLVMLENRSFDHMLGFLYPKSDNFEGLDGTESNP
                     DAAGNQATVFRITSGMQNAYYFPLANPTEGYQATNDQLFSSDTPPASGEGANDGFVTS
                     FATELQHPAHPLDPKLAGAAPGSVMGVYASETLPVLSGLAKGFAVCDGWFASVPTQTF
                     PNRAFAVAGTSLGVTDNSAHGLPAFNTPSVFGKLAQANQTWKIYGYSGEPLTARDFPD
                     TVTP"
BASE COUNT          205 a          290 c          344 g          179 t
ORIGIN      
        1 tggagtaacg gtgtcaggga agtcacgcgc ggtcagcggc tcgcctgagt acccgtagat
       61 cttccacgtc tgattcgcct gggcgagctt gccgaacacc gagggggtgt tgaaggcagg
      121 caggccgtgc gcggagttgt cggtgacacc cagcgaggtg cccgcgaccg cgaatgcccg
      181 gttaggaaag gtctgggtcg gcaccgatgc gaaccaccca tcgcacacgg cgaagccctt
      241 cgcgaggcct gagagcacgg gcagcgtctc ggaggcgtac acgcccatga ccgagcccgg
      301 cgccgcgccg gcgagcttgg ggtcgagcgg gtgcgcgggg tgctggagct cagttgcgaa
      361 gctcgtcacg aatccgtcgt tcgcgccctc gcccgaggca ggaggcgtgt ccgagctgaa
      421 aagctggtca ttggttgcct ggtatccctc ggtcgggttg gcgagtggga aatagtaggc
      481 gttctgcatg ccggaagtga tccggaacac cgttgcctgg ttcccggcgg cgtcggggtt
      541 cgactcagtg ccgtccaggc cctcgaagtt gtctgacttc ggatacagga acccaagcat
      601 gtggtcgaag gagcggttct ccagcattac cagcaccacg tggtcaatcg agtcgaggcc
      661 aggcacttta accccccatg ggtagccccg gcgccgatgc aaccgaggga cctgtaggta
      721 gggcagcata actgcaggaa ctcggcggac gccagactct gggagctgta tgcaggcgag
      781 cacacgatcg cttgacgata ggcacgaata ccacggtgca tagtcagcga tacataagaa
      841 attgcgtacc cgaaagcaac taagctacat atttagcact ggcctgcgca gggtttagcc
      901 ttagcgcgcg gaaaacgtga gcactttgaa cttcatggtc aaggttggcg tggcagcgcc
      961 caagccagcg aatgcagggc tggttacacc ttgctggcca gggcgacctg gcaaagct
//
LOCUS       DASRPQ010001143         1012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2328344, whole genome shotgun sequence.
ACCESSION   DASRPQ010001143 DASRPQ010000000
VERSION     DASRPQ010001143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2328344"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..203
                     /locus_tag="VFD73_13005"
     CDS             <1..203
                     /locus_tag="VFD73_13005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74915.1"
                     /translation="ASAPTDASFDVTARSVRGKVENDFLLEPKHTPFVVRAGSAFAGT
                     MNKAASSVRLFSFSGKIHLKKR"
     gene            267..836
                     /locus_tag="VFD73_13010"
     CDS             267..836
                     /locus_tag="VFD73_13010"
                     /inference="COORDINATES: protein motif:HMM:NF013375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HZI74916.1"
                     /translation="MNTRPGGPSDSSKAASAPGVRAVVLVGFMGAGKSSVGAALGRRL
                     GWPFEDLDDRIQAREQRSIEQIFRLSGEPAFRQLEHAALGSLIAELGASAKVVAVGGG
                     AFAQEKNAALLEAAGFSTIFLDAPVEELFRRCRQQPVDRPLRGDLDEFRRLYDARRPC
                     YLKAGLRIDTAGKDVDRVAGEVIDSLGLR"
BASE COUNT          185 a          283 c          346 g          198 t
ORIGIN      
        1 aggccagtgc tccgaccgac gcgtcgtttg acgtgaccgc gcgctcggtg cggggcaagg
       61 tagagaacga ttttctcctg gaaccgaagc acactccctt tgtggtcagg gcagggagtg
      121 ccttcgcagg tacgatgaac aaggcagcat cttcggtccg gttgttttcc ttcagtggta
      181 aaatccacct caagaagcgc taaaaaccaa acgacagtga gaggctggcg ggggcggatg
      241 gattcggtcc cgcgaatttg ccctacatga acactcgacc aggcgggccg tccgacagca
      301 gcaaggcggc gtctgccccc ggggtacggg ccgtagtcct ggtgggcttc atgggcgccg
      361 gcaagagcag tgtcggggcc gctctgggtc gtaggctggg ctggcctttt gaagatctgg
      421 acgatcggat ccaggcccgg gaacaacgct ccatcgagca gattttccgg ctttccgggg
      481 agcccgcatt tcgccagttg gagcatgctg cgctgggttc gctgattgcg gagctgggcg
      541 cctccgccaa ggtggtggcg gttgggggtg gggctttcgc ccaggagaaa aatgccgcgc
      601 tgctcgaagc ggccgggttc tccaccatct tcctggacgc tccggtggaa gagttattcc
      661 gccgctgccg ccagcaaccg gtggatcgac ctttgcgcgg cgatctggat gaattccgcc
      721 gcttgtatga cgcccgcagg ccctgctatc tgaaagccgg gctgcgcatc gacaccgcgg
      781 gcaaagacgt ggaccgggta gcgggcgaag tgatcgacag cttgggactt cgataaccgc
      841 tttcggtctg tcgaagccgc tgtttaaccg gcatttcgaa ggagtgtgca cgtgaaggta
      901 agaacggctc ggacagcggg gatctggtgg cttctgctgc tctcggcggt ggtggcaagc
      961 ccggccaagg acaagcaacc tgcatatcag aatgtggacg cgggctcatt cg
//
LOCUS       DASRPQ010001144         1406 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2664432, whole genome shotgun sequence.
ACCESSION   DASRPQ010001144 DASRPQ010000000
VERSION     DASRPQ010001144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2664432"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..459)
                     /locus_tag="VFD73_13015"
     CDS             complement(<1..459)
                     /locus_tag="VFD73_13015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74917.1"
                     /translation="MPRTATQVGYWSGLAAFVFAVAYDTVQILQVFGVLRFPLDEILI
                     YGTSLCIVVPFVLEIVCLHHVTAPERQFWTHSSVVFAGMYAVFVTANYVVQLATVLPA
                     KLRGQPEAIGLLEQSPHSLFWDYDAVGYISMGLAALLLIPAVRNIGFERWV"
     gene            complement(573..>1406)
                     /locus_tag="VFD73_13020"
     CDS             complement(573..>1406)
                     /locus_tag="VFD73_13020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74918.1"
                     /translation="HAFEINRGHPAKALGDTARADEDEYAPHTALYERVLDAMYGDGD
                     SVNGGQAVRELARMTARPASGGSDARAVAQTDLCVVTLWRLSHGEHGGAAQAISRLRS
                     RANGDSPASLTSNHICAVLLEAKLTAASGAAGAASALDRLDTLMRSGPGGSRNGPPVA
                     FTLSPAYVRSMVGISPCGFEDFANLEVARLRERQGNLQAALSAVRRRSYAYHLTDYLA
                     AHLRQEGRLAALTGDSSGAVRAYRHYLALRSDPEPALRPAVEAVRAELAKLQKGGEPR
                     Q"
BASE COUNT          273 a          466 c          416 g          251 t
ORIGIN      
        1 cacccacctc tcaaaaccga tgttgcggac cgcagggata agaagcaacg ctgccaggcc
       61 catcgatatg taccctactg cgtcatagtc ccagaacagc gagtgcgggc tctgttcgag
      121 caacccgatg gcttcgggct gccctctgag ctttgccggg agcaccgttg cgagctggac
      181 cacatagttg gcagttacga acacggcata catgcctgca aaaaccacgg acgagtgggt
      241 ccagaactgt ctctctggcg cggttacatg atggagacag acgatctcga gcacgaatgg
      301 caccacgatg cagagggatg ttccgtatat cagaatctcg tccagcggga acctgagcac
      361 gccgaaaact tgcaagatct ggacggtgtc atacgcaaca gcaaagacga acgccgccaa
      421 gccggaccag taccctactt gggtagccgt tcggggcaat gatcctcctc gtcagtttca
      481 gtcgctcggc aaagtcgagc cgttggttga gcgcgcagca gtttgatttg actagctgca
      541 cactacttga tcgcatcagc ctaccggtca gctcactgac gcggttcccc tcccttctgt
      601 agcttcgcca actccgcccg taccgcctcg accgctgggc gcagagccgg ctccgggtca
      661 gaccggagcg cgaggtaatg gcgataggcc ctgaccgctc cggagctgtc tcctgtcaga
      721 gcggccagac gaccctcctg ccgcaggtgc gctgccagat aatcggtcag gtggtaggca
      781 tatgaccttc gcctgaccgc ggatagcgcc gcctgcaggt tgccctggcg ctcgcgcaac
      841 cgggccacct ccaggttggc aaagtcttca aagccacagg gactgattcc aaccatcgac
      901 ctgacatacg ccgggctgag ggtgaatgcc actggtggcc cattacgcga tccaccggga
      961 ccgctccgca tgagggtgtc caggcgatcc agcgcggagg ccgcgccagc tgcgcctgaa
     1021 gcggccgtga gcttcgcctc cagcagcacg gcgcagatgt gattgctggt gagcgaggcc
     1081 ggcgaatcgc cattcgcgcg agaccgcaaa cgcgagattg cttgtgcggc accgccgtgc
     1141 tcaccatggc tcagccgcca gagagtgacg acgcacaggt ccgtctgcgc gaccgctcgc
     1201 gcgtcgcttc ctcccgaggc cggccgcgct gtcatccggg ccaactcccg caccgcttgc
     1261 cccccattca cactgtcccc atcgccatac atggcatcga gcactcgctc gtacagggcg
     1321 gtgtgtggcg cgtactcatc ttcatccgcg cgcgccgtgt cacccagcgc cttggcagga
     1381 tggccgcggt tgatctcgaa agcgtg
//
LOCUS       DASRPQ010001145         1072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2030369, whole genome shotgun sequence.
ACCESSION   DASRPQ010001145 DASRPQ010000000
VERSION     DASRPQ010001145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2030369"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..823)
                     /locus_tag="VFD73_13025"
     CDS             complement(<1..823)
                     /locus_tag="VFD73_13025"
                     /inference="COORDINATES: protein motif:HMM:NF024748.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HZI74919.1"
                     /translation="MHKMRGTTAAGAVAGITVLTLSVLLGMADAAPLGHHGTESTFGI
                     CHSSGSHDSLAAAISRRVLRWVQRRAPETPHVAVRMDDPYLGINCYLNSSQHFYSASV
                     VKTIILATLLNKREREHLSLLSDRERTLARAMITESDNNAATALWDQDGMKNLTYFLQ
                     VAGMHNTQLNPSWGLTRITAQDETKLLRDILLRPNSVLDTHGQDYELKLMGQVIPSQR
                     WGVSASTPIAFTVHIKNGWAPLPYVSSPWYVNSTGAFTTTNPARDYTIVVLTHGSA"
     gene            complement(875..>1072)
                     /locus_tag="VFD73_13030"
     CDS             complement(875..>1072)
                     /locus_tag="VFD73_13030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74920.1"
                     /translation="LDRESGDGRALCCGSWKLGSTRQQVTQDDHLPARTRPSDWKLTS
                     RLGFEVLAIIPEMPRDTPIPG"
BASE COUNT          172 a          326 c          360 g          214 t
ORIGIN      
        1 ccgcgcttcc atgcgtgagg accacgatgg tgtagtccct ggcggggttg gtggtggtga
       61 acgcgcccgt gctgttgaca taccagggcg agctgacgta cggcagcggc gcccagccgt
      121 tcttgatgtg gaccgtgaag gcgattggcg tactggcgga cacgccccag cgctgtgacg
      181 ggatgacctg ccccatcagc ttgagctcgt agtcctgccc atgggtgtcg aggaccgagt
      241 tcgggcgcag caggatgtcg cgcagtagtt tcgtctcgtc ctgcgcggtg atccgggtca
      301 gcccccatga tgggttgagt tgcgtgttat gcatcccagc gacctgcagg aagtacgtga
      361 gattcttcat gccgtcctgg tcccacagcg cggtcgcggc gttgttgtcc gactcggtga
      421 tcattgcccg ggcgagcgtc cgttctctgt cggacaggag gctgaggtgc tcccgctccc
      481 gcttgttgag caaggtggcg aggatgatcg tcttgaccac gctggctgaa tagaagtgct
      541 ggctggaatt caggtagcag ttgatcccca ggtacgggtc atccatccgg accgccacgt
      601 gcggggtctc gggagcgcgg cgctgcaccc agcgcaggac ccggcgggag atggccgccg
      661 caagcgagtc gtgggagccg gaggagtggc aaatcccgaa ggtggactcc gtcccgtggt
      721 gccccaaggg agccgcgtca gccattccca gcaagacgct cagcgtcagc actgtgatcc
      781 ccgcgaccgc cccggctgcc gttgttccgc gcattttatg cattattggc tgctctcgtc
      841 ccattccagt cgcgtctaat cgcgaggcgt cactctatcc cggtatggga gtgtcgcgag
      901 gcatctcagg gatgatcgcg agtacctcga accccagccg cgaggtaagc ttccagtcgc
      961 ttggccgggt ccgggcaggg agatgatcgt cttgggtgac ttgctggcgc gtcgagccca
     1021 gcttccagga cccgcaacag agtgcgcgcc catcaccact ctcgcgatcc aa
//
LOCUS       DASRPQ010001146         1804 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1394516, whole genome shotgun sequence.
ACCESSION   DASRPQ010001146 DASRPQ010000000
VERSION     DASRPQ010001146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1394516"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            888..1688
                     /gene="extP"
                     /locus_tag="VFD73_13035"
     CDS             888..1688
                     /gene="extP"
                     /locus_tag="VFD73_13035"
                     /inference="COORDINATES: protein motif:HMM:NF040969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenite/tellurite reduction operon b-type
                     cytochrome ExtP"
                     /protein_id="HZI74921.1"
                     /translation="MNRGLLDRAGSYITSSQAWRSIFRHGYPDTPLNQSLVMMGNVFL
                     HLHPVKVSRKAMKITYTWCLGGLSFFLFLVLTITGVFLMFYFVPEARVAYNNIQQIQS
                     AVAFGNLVRNMHRWAAHLMVVTVTLHMIRVFYHGAYKPPREFNWVVGVVLFLTTLLLS
                     FTGYLLPWDQIGYWAITVGSNMASYAPVLGAQAHNVLTGQPVGVGGPTLIRFYTLHVI
                     GLPLVGAIFMAVHFWRIRKDGGEAGPPPPSRREIEQARAREMEVASLS"
BASE COUNT          281 a          714 c          455 g          354 t
ORIGIN      
        1 gcccgtttgc gccaggaagc gcgcccgcac cggcgccagc tcatccagcg tcagcccctc
       61 aggcatcggc ccctccgcca gtacatcgcg ccacgccagc acctcacccg gcagccccgc
      121 cgcccgcaac gaccccgccg ccgagtcgcc attcgtgatg tgcagcatcg tcatctctcc
      181 ctcgcctctc gcgcgccctc tctcatttcc tttccttacc cgcgcctgcc gcaactcctc
      241 ttccgctcat cttcctcatc agcctcaccc atccggtcat gtcagcctcc caagatgcta
      301 cgaacactcc cgctcctcct ccgtgcccct ccgttgcctc cgttcctctg tgttggttct
      361 cgtcccgctt cacttcctcc gcgtcctctg cggttcaatc ttctctctat ctctcctcct
      421 ccgtgaccct ccgtgtcctc tgtggtagtt ccccgtctcc ctcacctgag cgcaaaaatc
      481 aggtgcatac ctgatgagag acgattgtga tgtcaggtac actctaacct aatggaccgt
      541 agcgcccgcc tagcggagct atgcccgcga cactgccacc tcctttcccc ttatggagag
      601 gggatcggag gttaagagcg gccttggtcc aacttgtgct gcggaggcac agcgaagccg
      661 ccggtactgc tggatgcatg accgattgcg cttcaccggc caccccggta taatctgaca
      721 tggtgcccgg tccctgccgt gcgccgcggc acatgacacg cacaaccccg acgcgtcgca
      781 tgcgctctcc ctcgcgccgg ttccccgcgc gatagcgaga ggccgagacg atttcgcgat
      841 cgccacgaca tccaatgaca tcccctggag gaggcaccgt gagcaccatg aaccgcgggc
      901 tgctggaccg ggcaggctcc tacatcacga gcagccaggc ctggcgctcc atcttccggc
      961 acggctaccc agacaccccc ctcaaccagt ccctcgtcat gatgggcaac gtcttcctcc
     1021 acctgcaccc cgtcaaggtc agccgcaagg ccatgaagat cacctacacc tggtgtctcg
     1081 gcggcctctc cttcttcctc ttcctcgtgc tgaccatcac cggtgtcttc ctcatgttct
     1141 acttcgtgcc cgaagcgcgc gtcgcctaca acaacatcca gcagatccag agcgccgtcg
     1201 ccttcggcaa cctcgtgcgc aacatgcacc gctgggcggc gcacctgatg gtcgtcaccg
     1261 tcaccctgca catgatccgc gtcttctacc acggcgcgta caagccgccg cgtgagttca
     1321 actgggtcgt cggcgtcgtg ctcttcctca ccaccctgct gctcagcttc accggctacc
     1381 tcctgccgtg ggaccagatc ggctactggg ccatcaccgt cggctccaac atggcctcct
     1441 acgctcccgt cctcggtgct caggcccata atgtcctcac cggccagccc gtcggcgtcg
     1501 gcggccccac cctcatccgc ttctacaccc tgcacgtgat cggcttgccg ctcgtcggcg
     1561 cgatctttat ggccgtccac ttctggcgca tccgcaagga tggtggtgag gccggcccgc
     1621 ccccgccatc ccgccgcgag atcgagcagg cccgcgcccg cgagatggaa gtcgcctcgc
     1681 tcagctagtc gtcctgggcg ggtgtcgcta gggtgcccgt ccgttcgtta gattgcgtag
     1741 gggcgcaccg cgcacccgca tcgcaccagc cacccgaccg agcccagaca gacgaaggag
     1801 acgc
//
LOCUS       DASRPQ010001147         3711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4208258, whole genome shotgun sequence.
ACCESSION   DASRPQ010001147 DASRPQ010000000
VERSION     DASRPQ010001147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3711
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4208258"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..205
                     /locus_tag="VFD73_13040"
     CDS             <1..205
                     /locus_tag="VFD73_13040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74922.1"
                     /translation="EELRAFCIRVGAPASALHLGRWPHLDLKLEPRSRALACTDVRVF
                     DRSSDMLRFLKSLSRNAPLPPQQ"
     gene            422..832
                     /locus_tag="VFD73_13045"
     CDS             422..832
                     /locus_tag="VFD73_13045"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI74923.1"
                     /translation="MTAGPRPNDSPASSTVLVVDDEDMVRRLAARMLAGMGYRVLEAR
                     SGQEAVRLLRRGAHRIQGVVTDVAMPGIGGRELGETIAQCWPQIRVLYMSGFAETRMV
                     NAGQLDPTQPFIQKPFTSEQLGSKVRKLLGDRVE"
     gene            complement(836..1108)
                     /locus_tag="VFD73_13050"
     CDS             complement(836..1108)
                     /locus_tag="VFD73_13050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74924.1"
                     /translation="MLEFEPYSSPLPSSLPRPRRAVADHSGEKEARVKPDCVHLYPGV
                     DPQTWYQVVQEGEYRDEMEGLWIQVNDWVTYVLAKHFDLQSRPPLH"
     gene            complement(1224..2129)
                     /gene="rocF"
                     /locus_tag="VFD73_13055"
     CDS             complement(1224..2129)
                     /gene="rocF"
                     /locus_tag="VFD73_13055"
                     /EC_number="3.5.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004053 - arginase activity [Evidence
                     IEA];
                     GO_process: GO:0019547 - arginine catabolic process to
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginase"
                     /protein_id="HZI74925.1"
                     /translation="MIVHVLGVPMDLGSGRRGVDMGPSAIRIAGVDRRLTELGHKVVD
                     DGDVVIKNMEELRVGDERARYLTEIARASAVIARKVERVMALGHFPLVLGGDHSIAVG
                     TVSGIAAFARNQSKRTGVLWIDAHGDINTPESSPSGNIHGMPLAALLGYGPSELTGIG
                     GWAPKVAPGNVALVGIRSLDAGEKRRVKETGIQVHTMSEIDRHGVHQVMKKALARVTD
                     GTDFVHVSFDLDALDPTVAPGVGTPVKGGLDYREAHLIMEVIADSGVMTSLEVVEANP
                     ILDECNASAEFAVELIQSAFGKKIL"
     gene            complement(2211..2531)
                     /locus_tag="VFD73_13060"
     CDS             complement(2211..2531)
                     /locus_tag="VFD73_13060"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HZI74926.1"
                     /translation="MSYQQIYDLVRQIPAGQLATYGQIAQLAGLAGHARQVGYALHAL
                     PDSSTVPWHRVVNAAGRISPRATPGAELVQQQLLAREGVELNARGRVPLERLRWTPRR
                     RPPQ"
     gene            complement(2536..2751)
                     /locus_tag="VFD73_13065"
     CDS             complement(2536..2751)
                     /locus_tag="VFD73_13065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74927.1"
                     /translation="MRPLSIVGILLLVLGAFIIFRGASYKSRDEVLRVGDLKASVEQR
                     HAIPTWVGGVAIVAGLVLLAGGMRRRT"
     gene            complement(2753..2956)
                     /locus_tag="VFD73_13070"
     CDS             complement(2753..2956)
                     /locus_tag="VFD73_13070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74928.1"
                     /translation="MRALFAIFALLGVAGIVLGVLTILRGTGSDPGVPFRFENYGGPG
                     PIIAGIIVLATSLYLLSTWKRRD"
     gene            3046..>3711
                     /locus_tag="VFD73_13075"
     CDS             3046..>3711
                     /locus_tag="VFD73_13075"
                     /inference="COORDINATES: protein motif:HMM:NF027806.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74929.1"
                     /translation="MPRIDAQCQVAKDSLVVVPEPTAQALQYYRSGNVLWAVDTVIAL
                     LIPALFLATGFSARLRNAALRIGRRRWLPSLVAYAVAFVCLTALLMLPLSFYEGFVRE
                     HAYGLSNQTAQRWASDWAKGVAVGAVGLSLVLWIPYLLLSRSPTRWWLYAGLAAAPLA
                     TFLLVITPVWIDPLFNRFGRMKNPVLEQRILTLAARAGIAGSRVFEVNKSEDTKTVNA
                     YVTG"
BASE COUNT          677 a         1175 c         1169 g          690 t
ORIGIN      
        1 ggaggagctg cgggcgttct gcattcgggt gggcgctccg gcctctgccc tgcacctggg
       61 tcgctggcct cacctcgacc tgaagctcga gcctcgcagc cgagcgctgg cctgcaccga
      121 cgttcgcgtg ttcgaccgca gctccgatat gctccggttt ctgaagagcc tttcccgaaa
      181 tgcgcccctt ccgccgcagc aatgactgcg gtaaaacccg agttgatgtc tgttggtgcc
      241 gagctcacaa accggtccgg ctaacctgtt tgcgatgctg gggtgagcgc gtcatcgtcg
      301 tacctgtgac actgaccacg gttccgccgg agaggcaatg ccaatgttgg ctcccgattc
      361 gggggctcgg cgtgaatcgc cgccgcgccg gtcacgaccc taacgacgga ggacgcccgc
      421 agtgactgca ggtccccgtc ccaacgactc gccagcgtcg agcactgtgc tggtggtcga
      481 tgacgaagat atggtgcggc ggttggccgc acgtatgctg gcaggcatgg ggtaccgtgt
      541 tctggaggcg cgcagcggac aggaggccgt tcgcctgctg cgccgagggg cccatcggat
      601 tcagggagtg gtcaccgacg tcgccatgcc gggcatcgga gggcgcgagc tcggcgagac
      661 gatcgcgcaa tgttggcccc agatccgggt gctgtacatg tcgggatttg cggagacgcg
      721 gatggtaaat gccggccagc tcgatcccac ccagccgttc attcaaaagc cgtttacgtc
      781 ggagcaactc ggaagtaagg tccggaaact gctgggagat cgagtggagt aagagtcagt
      841 gcagcggcgg gcgggattgc agatcgaagt gctttgccag gacgtaggtc acccagtcat
      901 tcacctgaat ccagagaccc tccatttcat cgcggtactc accctcctgc accacctgat
      961 accacgtctg cggatcgacg ccgggataca gatgcacgca atcgggtttt acccgggctt
     1021 ctttttctcc agagtggtcg gcaactgccc ggcggggccg cggcagcgaa gaggggagcg
     1081 gtgaggagta gggctcgaac tcaagcatct tattcgccag ggccagggtc aaccgcccta
     1141 tagtacatgc cccacagggg aaagggaaac ccgaagatca cccgcacgca tcggtgcaga
     1201 tcaccccgac ccatcgatcg ttactacaga atcttcttgc cgaacgccga ttggatcagc
     1261 tcgaccgcaa actccgcgga ggcgttgcac tcatccaaaa tggggttggc ttcgacaact
     1321 tcaagcgacg tcatgacgcc gctgtcggcg atcacctcca tgatgaggtg cgcttcccgg
     1381 taatccaaac ctcctttgac cggagtgccg actcccggcg ccacggtggg gtccagcgca
     1441 tccagatcga agctcacatg cacgaagtcg gttccgtcag tgacccgggc cagagctttc
     1501 ttcatgacct ggtgcacgcc atggcggtcg atttcggaca tggtgtgcac ctggataccg
     1561 gtctccttca ctcgtctctt ttcacctgcg tccagacttc gaatcccgac cagggcgacg
     1621 ttcccgggag cgacctttgg tgcccaccct ccgataccgg tcagctcgct gggaccatat
     1681 cccagaagcg cagccagcgg cataccgtgg atgttgccgg agggtgagct ttccggggtg
     1741 ttgatatcgc catgcgcatc gatccacagc accccggtgc gcttcgactg gttccgggca
     1801 aaggctgcaa tcccggagac ggtgcccacc gcgatagaat ggtcgccgcc cagcaccaaa
     1861 ggaaaatgcc ccagtgccat gacccgctcg accttacgcg cgatgacggc ggaggcccgg
     1921 gcgatttccg tgagataccg cgcccgctcg tcgccgactc gcagctcctc catgttcttg
     1981 atgaccacat caccgtcgtc caccaccttg tggccgagct cggtcaaccg ccgatccacg
     2041 ccggcgatgc ggatggcgga ggggcccatg tcgacgccgc ggcggcctga cccgagatcc
     2101 atgggtacgc ccagcacatg gacgatcatc gacttctgcg ctggttccgc tcggttactt
     2161 cgcggcaccg ggatgtggcg agaaggcgtg gtgcggagtg gcgacagcca tcactgcggt
     2221 ggtcgacgtc gaggtgtcca gcgcaggcgc tcgagcggga cacggcctct ggcattcagc
     2281 tccacgcctt cgcgcgccag caactgctgc tgcaccaatt ccgcaccagg cgtggcgcga
     2341 ggactgatgc ggccggcggc attcactacc cgatgccacg gcaccgtact gctgtcgggc
     2401 aaggcatgga gtgcatagcc aacctggcgg gcgtgcccag ccagaccggc gagctgcgcg
     2461 atctgaccgt acgttgcaag ctgtccggca gggatttgac ggacgagatc gtagatttgc
     2521 tgatagctca ccggctcagg tgcggcgtcg catgccgccc gcgaggagca ccagtcccgc
     2581 gacgattgcc acgccgccga cccaggtggg aatggcatgg cgctgctcga ccgaagcctt
     2641 gaggtcgcct actctgagca cctcgtctcg cgatttgtag gaggcgccgc ggaagatgat
     2701 gaaggcgccg agcacgagga gcagaatccc aacgatggag agcggccgca tgttaatccc
     2761 tccgtttcca ggtcgagagc aggtacagac tggtggcgag cactatgatt ccggcgatga
     2821 tcggcccggg accgccatag ttttcgaagc ggaagggcac tccgggatcg cttccggttc
     2881 cccggaggat ggtcagcacc cccaggacaa tgccggcaac tcccagcagg gcgaaaatgg
     2941 cgaagagcgc ccgcatgctt gcctcggaat cgattcgggt ccggttgact gcgcacggtt
     3001 gtaagcccct aagatacatc ggaatgccac gaaggaagtg acacgatgcc gcgaatcgat
     3061 gctcagtgcc aagtcgcgaa ggacagcctg gtggtggtac cagagccgac ggcacaggca
     3121 ctccagtatt accggagcgg caacgtgctc tgggcggtgg acacggtgat cgcactgctc
     3181 atcccggcgc tcttcctcgc gactggtttc tccgcccggc tccggaatgc ggcactgcgt
     3241 atcggccgcc gccgctggct tccttcattg gtggcctacg ccgtagcctt cgtgtgcctc
     3301 actgcattgc tgatgctgcc actttcattc tacgagggtt ttgtccggga gcacgcgtac
     3361 ggactctcca accaaaccgc tcagcgctgg gcaagcgact gggccaaggg cgtcgcagtc
     3421 ggagcggtcg gtctgagtct ggtcctctgg attccgtatc ttctgctctc ccgaagcccc
     3481 acccgatggt ggctgtacgc cggtctcgcc gccgccccgc ttgccacctt tctcctggtg
     3541 atcactccgg tgtggatcga tcccttgttc aaccgctttg ggcggatgaa gaacccggtc
     3601 ctggaacagc ggatccttac gctggccgct cgggccggta tcgccgggag ccgggtgttc
     3661 gaggtcaata agagtgaaga caccaagacg gtgaacgcct atgtgaccgg g
//
LOCUS       DASRPQ010001148         1403 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1394814, whole genome shotgun sequence.
ACCESSION   DASRPQ010001148 DASRPQ010000000
VERSION     DASRPQ010001148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1403
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1394814"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..399)
                     /locus_tag="VFD73_13080"
     CDS             complement(<1..399)
                     /locus_tag="VFD73_13080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI74930.1"
                     /translation="MTDSNVFQLSQSGTLCDPLTEVLRSGARALLAQAVAAEVAGFLE
                     GHADKLTDDGRQRLVRHGHLPEREIMTGIGPVAVRAPRIRDRVGTGEERIAFSSAILP
                     PYARRSKSLEVLIPILYLKGISTGGFEEALA"
     gene            966..>1403
                     /locus_tag="VFD73_13085"
     CDS             966..>1403
                     /locus_tag="VFD73_13085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZI74931.1"
                     /translation="MHGDEKSDPSIVAGKPANGVGRPGLELVERREGAEENTGQASTR
                     RTPSRASVSPGLDRVRTAARLDRKERFTALLHHVDVELLRSAYSWLKRDAAPGVDGMT
                     WQEYGEDLERKLADLHARIHRGAYRAQPSRRYYIPKPDGRQRPL"
BASE COUNT          285 a          424 c          464 g          230 t
ORIGIN      
        1 cgccagcgcc tcctcgaacc cgcctgtgga gatgcccttg aggtagagga tcgggatcaa
       61 cacctcgagg cttttcgagc ggcgcgcgta aggcggcagg atcgcggagc tgaaggcaat
      121 gcgctcctcg cccgtgccga ctcggtcacg aatgcgcgga gcgcgcaccg cgaccgggcc
      181 gatgccggtc ataatctcgc gctcgggcag gtgaccgtgg cgcaccaggc gttgacgtcc
      241 atcgtcggtg agcttgtcgg cgtggccctc gagaaacccg gccacctccg ctgccacagc
      301 ctgggccaaa agcgcgcggg ccccgctgcg cagcacctca gtcagcgggt cgcaaagcgt
      361 gcctgactgg gaaagctgga aaacattact gtcggtcacg gcgtatcact ccttcagtgg
      421 agaagtggag gcgggaacac ccccacgata cgccgcccta ccctttcatg ccgtcaccaa
      481 cttctgcgaa tagctcattg caataaccgg tgtagttgcg catcgcccca cagacaaagt
      541 tttcgtagaa ttgctggtcc gggtcgtcga tagtccttgc ggtagatctt aattaagttg
      601 acaatgcgtg cgccgggaga ccggcaagga gtaaagagtg caagtctctg ccagtgaagg
      661 tctagcgaac cacactgtcc ccgagtcatg cgctgaaatc cgtgagggtt ttggtgaagc
      721 gttgacaggg gtgcgcatag gctgggtatt gagccgcgaa aacaacaccc tcgggacgcc
      781 gacactgtgc attgagtgga aggcaacatg gccaggtgcg ccagcgcgag cgcttggctg
      841 gcccggcgcg gtcgtagacc ccagcatgtg cgtaagctcc ttgcgcggga accgggagat
      901 ctcgcccctg gccaggatca ctaaccactg gcccgcatcg ggaaggtgat gagccgaagc
      961 cggtgatgca cggggacgag aagtcagacc cctccatagt agctgggaag ccggcgaacg
     1021 gcgtcgggcg accggggctg gagttggtgg agcgaaggga gggggccgag gagaacacgg
     1081 gacaagccag cacgcgccgg accccgagcc gggcaagcgt gtcccctgga ctggaccgtg
     1141 tacggacagc tgcaaggctg gataggaagg aacggttcac cgcgctcctc caccatgtcg
     1201 atgttgagct tcttcgcagc gcctactcct ggctaaagcg ggatgcggcg cccggtgtgg
     1261 acggcatgac atggcaggaa tacggcgagg atctcgagcg caagctcgcc gatcttcacg
     1321 cccgtattca tcgaggcgcc taccgggcgc agccgtcacg ccggtattac ataccaaaac
     1381 cggatggccg gcagcgcccg ctc
//
LOCUS       DASRPQ010001149         1038 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4535706, whole genome shotgun sequence.
ACCESSION   DASRPQ010001149 DASRPQ010000000
VERSION     DASRPQ010001149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4535706"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            28..>1038
                     /locus_tag="VFD73_13090"
     CDS             28..>1038
                     /locus_tag="VFD73_13090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74932.1"
                     /translation="MSVSLRRFTIIDGAVAFDNRQSKLKASLQGYNQTLSGDFSQKQL
                     AIDTRSQADMVSVSFAGVPYLRRVKLGLDAVVQADLAGKSYSLRQSELRLNDLRLDLS
                     GTARSVGQRLGLDLAFKAPSSNFRSIVSLVPAIYAHDFARLKTSGSFEVSGQVKGEYG
                     DSAFPGFALNAKVNDAAFQYPDLPLPARSIFVDLSLTNPGGSPDSTVVKLDRFHLQLG
                     RNPIDARMVLRTPVSDPDIDARMSGKLDLADVRRTIKLDSIQQLAGVVTADASVRTRM
                     SYLDQKRYDKVAANGSVDLANLTVKGQALPQPLAVRQASLRLAPERAQLTNFTGTIGS
                     SDL"
BASE COUNT          194 a          361 c          306 g          177 t
ORIGIN      
        1 ggggcccaga ccacggccag caagcccatg tcggtgagcc tccgccgctt caccataatc
       61 gacggagcgg ttgcgttcga caaccggcaa tcgaagctca aggcttcact gcaaggctac
      121 aaccagaccc tcagcggaga cttcagccag aagcagcttg ccatcgacac tcggagtcag
      181 gccgacatgg tgagcgtctc ctttgccgga gttccctact tgaggcgggt gaagctcggg
      241 ctcgacgcgg tcgtccaggc cgatctggcg gggaaatcct atagcctcag gcagagtgag
      301 ctgcggctga acgatctccg gctcgacctc tcgggcaccg ctcgctccgt aggacagcgg
      361 ctcggcctcg atctcgcctt caaggcgccc agcagcaact tccggagcat cgtttccctg
      421 gtgccggcga tctacgccca tgacttcgcc cgactcaaga cctcgggcag cttcgaggtc
      481 tcgggacagg tgaagggcga gtatggcgac agcgctttcc ccggtttcgc gctcaacgcc
      541 aaggtgaacg atgccgcgtt tcaatatccc gaccttccgc ttcccgcgcg ctcgatcttc
      601 gtggatctgt cgctcaccaa cccgggtgga agtcccgaca gcacggtcgt gaagctcgat
      661 cgctttcacc tgcagctcgg ccggaacccc atcgacgcac gaatggtgct ccggaccccg
      721 gtatcggatc ccgatatcga cgcccgcatg agcggcaagc tggacctcgc cgacgttcgc
      781 cgaaccatca agctggacag cattcagcag ctggcaggcg tggtgacagc cgatgcctcg
      841 gtgcgtaccc ggatgtcgta tctcgaccag aagcgctacg acaaggtggc ggccaacggg
      901 agcgtcgatc tggccaacct caccgtcaag ggccaggccc tgccccagcc gctcgcggtt
      961 cgacaggcct cgctccgcct ggccccggaa cgggctcagc tcaccaactt caccggcacc
     1021 atcggcagca gcgatctc
//
LOCUS       DASRPQ010001150         2600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1395081, whole genome shotgun sequence.
ACCESSION   DASRPQ010001150 DASRPQ010000000
VERSION     DASRPQ010001150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2600
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1395081"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..454
                     /locus_tag="VFD73_13095"
     CDS             <1..454
                     /locus_tag="VFD73_13095"
                     /inference="COORDINATES: protein motif:HMM:NF024579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74933.1"
                     /translation="DAYAALGQSGKAGEYYHAMEIAVLQQPGPFHRAWSLFLLDHNRD
                     VPKVLAKVREEIRTRRDIYGYDLLAWAYYKSGDMHQATIAIDQALSLGTRDGSLLYHA
                     GMIALARGDSLQAAKYLQQALTVNPFWDPFQPALARAVLARIPVRLAA"
     gene            454..1059
                     /locus_tag="VFD73_13100"
     CDS             454..1059
                     /locus_tag="VFD73_13100"
                     /inference="COORDINATES: protein motif:HMM:NF025167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HupE/UreJ family protein"
                     /protein_id="HZI74934.1"
                     /translation="MSEFLTFVHLGFRHIVNPEALDHILFLLALAAIYRGRDWRDSLW
                     VISAFTVGHSITLALAASRLVIIPQAITEFLIPLTIVATGVENILVRSRQRRAGAGRY
                     RPVFAGVFGLVHGAGFAGYLQQLFTGSIVVPLFGFNIGIELGQLLVLSGAGATLLALD
                     RFLSLLQVPRMLTSPYRLRVVTVSLLVIVLATRMAIARQPW"
     gene            1071..1544
                     /locus_tag="VFD73_13105"
     CDS             1071..1544
                     /locus_tag="VFD73_13105"
                     /inference="COORDINATES: protein motif:HMM:NF042765.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6702 family protein"
                     /protein_id="HZI74935.1"
                     /translation="MAVLLAGQGPARVPAAHPLHTSLAEIEYQADRRVLEVSVRLFAD
                     DLCAAIGGLCEGPAGMPRDSTLSSYARGSFALEDGRGVPLRLRWLGAERTGGMVILQL
                     ESDVPRGDYRGVRVLHAMLWERFSDEVNLVQVRHDRRVETLLFTRGDPPKAVLLN"
     gene            complement(1546..2442)
                     /locus_tag="VFD73_13110"
     CDS             complement(1546..2442)
                     /locus_tag="VFD73_13110"
                     /inference="COORDINATES: protein motif:HMM:TIGR00654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HZI74936.1"
                     /translation="MSYRYFICDVFTDTRFGGNQLAVLPEASGLSSTRMQQIAREFNF
                     SETTFVLPAEQGNARRVRIFTPTAEIPFAGHPNVGTAFVLATIGAFGPIDRPINVTFE
                     EKAGLVPITISRRNGNLWCELSAPEPLRLGQTVSAESVASAVSLAPDDVVTTTHLPQV
                     ASVGLPFLMTELKDRMALGRARVSAPGFDAIAAQGVNPDIHLYTKTGDEFDIRARMFA
                     PFDGVPEDPATGSANCALAGLLRHYGDASDGTGSWRIAQGVEMGRPSVLDAQADKRNG
                     VVVATRVGGASVLVSEGVLEVD"
BASE COUNT          427 a          808 c          845 g          520 t
ORIGIN      
        1 ggatgcctac gcagcgctcg gtcaaagcgg gaaagcgggg gagtattacc acgcgatgga
       61 gatcgcggtg ctgcagcagc ccggcccatt tcatcgggcc tggagtctct ttctgctcga
      121 ccacaatcgc gacgtgccca aggtcctcgc caaggtgcgg gaagagatcc gcactcggcg
      181 agacatctac ggatacgatc tcctggcctg ggcttactac aagtcgggcg acatgcatca
      241 ggcgacgatt gccatagacc aggcgttgtc gctgggtacc cgggacgggt cgctccttta
      301 tcacgccggc atgatcgccc tggcgagggg agattcgctg caggccgcga aatacctgca
      361 acaggccctc acggtgaatc cattctggga ccctttccag cccgcgctgg cgcgagcggt
      421 tttggcccgg attccagtac ggctggcggc atgatgtccg agttcctgac cttcgtccac
      481 ctcggattcc gccacatcgt gaatcccgag gcgctggatc acatcctctt tcttctggcg
      541 ctcgccgcga tttaccgcgg acgcgactgg cgcgacagcc tctgggtgat ctccgctttc
      601 acggtcggtc attcgatcac cttggcgctg gccgccagtc gcctcgtcat cattccgcag
      661 gcgattaccg agtttctgat tccgctcacg atcgtggcca ccggagtgga gaacatcctg
      721 gtgcgctcgc ggcagcgacg cgccggggca gggaggtacc gtcccgtctt cgccggagtc
      781 ttcggactgg tgcatggggc cgggttcgcc ggttatctgc agcagctctt cactgggtcg
      841 atcgtcgtgc ccctgttcgg attcaacatc gggatcgagc tggggcaact gctggtgctc
      901 agcggtgccg gtgcgacgtt gcttgcgctc gaccgtttcc tgtccctgct ccaggtgccc
      961 cgcatgctta cgtcgccgta ccggcttcgg gtggtaaccg tgtcactcct ggtcatcgtg
     1021 ctcgccactc gcatggcgat tgcgcggcag ccatggtgaa gcggctgatc gtggcagttc
     1081 tgcttgcggg ccaaggtcca gcgagggttc ccgccgctca cccgctgcat acctcgctgg
     1141 ccgagatcga gtatcaggcg gaccggcggg tgctcgaggt cagcgtgagg ttattcgccg
     1201 acgatttgtg cgctgcgatt ggtggattgt gtgaaggtcc cgcggggatg cctcgcgatt
     1261 caacgctctc cagctacgcg cgcggcagct ttgcgctcga ggatggtcgg ggagtgccgc
     1321 tccgcttgcg gtggctgggc gccgagcgga ctggcggcat ggtcattctc cagctggagt
     1381 ccgatgtccc tcgcggtgac tatcgcggtg tccgggttct ccacgcgatg ctctgggaac
     1441 gattctccga cgaggtgaac ctcgtgcaag tccggcacga ccggcgggtc gagaccctgc
     1501 tgttcactcg gggagatccg cccaaggctg tcctcctgaa ctgattcagt cgacctcgag
     1561 cacaccttcg ctgacgagta cgctggcgcc gcctacccgg gtcgctacca ccaccccgtt
     1621 tcgtttatcg gcctgagcat ccagtacgct gggacgaccc atctccacgc cttgcgcgat
     1681 acgccaggag ccggtgccgt cagaggcatc gccgtagtgg cggagcaatc cggccagggc
     1741 acaattggcg ctcccggtcg ccggatcctc agggacacca tcgaacggag cgaacatccg
     1801 ggcccgaatg tcgaactcgt ccccggtttt ggtgtagagg tgaatgtcag ggttcacgcc
     1861 ttgcgccgcg atggcgtcga atcccggtgc actcacccgg gcccgtccca aagccattcg
     1921 gtccttcagc tccgtcatca ggaacggaag cccgaccgag gccacctggg gaaggtgggt
     1981 cgtggtgacc acatcatccg gagcgaggga gacagcagag gcgacggact cggcggacac
     2041 tgtctggccc agccgcagcg gctcgggtgc ggaaagctcg caccagaggt tcccgttccg
     2101 ccgagagatc gtgatgggaa ccaggccggc tttctcttcg aaggtcacgt tgatcggccg
     2161 gtcgatcggg ccgaacgctc caatcgtggc gaggacgaac gcggtgccga cgttgggatg
     2221 tccggcaaac ggaatctcgg cggtcggcgt aaagatgcga acccgccggg cgtttccctg
     2281 ctcggccggc agcacgaagg tggtctccga gaaattgaac tctcgcgcga tctgctgcat
     2341 ccgtgtgctc gagagaccgc tggcctcggg cagcacagcc aactggttgc cgccgaatcg
     2401 ggtgtcggtg aacacgtcgc agatgaagta gcggtaactc atcgggtcgc caggcaaggg
     2461 ttggagctct gggttgcgct atcgaaaagt agcgtcctag atcaagatgg cggggggtcg
     2521 taccgctgaa tagtttgctc ttactttcta gtcctttcaa tagcatggaa tccggcgagc
     2581 atccgctgtt ccgcatgtgg
//
LOCUS       DASRPQ010001151         1031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1714031, whole genome shotgun sequence.
ACCESSION   DASRPQ010001151 DASRPQ010000000
VERSION     DASRPQ010001151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1714031"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(207..680)
                     /locus_tag="VFD73_13115"
     CDS             complement(207..680)
                     /locus_tag="VFD73_13115"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZI74937.1"
                     /translation="MGRRRRLAGAPGRGTLEKDKPPILGLIQRGGQVVLRMLPNVQQT
                     TIKPVIAASVVPGTLIHTDEYNVYARLSAWGYPHKTVCHARGEYARDEDGDGFCEIHV
                     NTIEGFWSLLRSWLRPHRGISQDKLPLYLGFFQFVHNVRRRGKALLGALVSGLVG"
     gene            complement(602..>1031)
                     /locus_tag="VFD73_13120"
     CDS             complement(602..>1031)
                     /locus_tag="VFD73_13120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74938.1"
                     /translation="VIRNGHDDGQRHRQRYLCKACHGRFDDLSGTVLAGHHQPLRVWV
                     SCLYLMGLNLSNQQIGEELGLCTSEAQAMTEHLRHGLVSRTRAAKLQGEVEADEVYIV
                     AGHKGQPAEVEKRGAWDGGADLRARRDAARWKRTSHRSSA"
BASE COUNT          183 a          312 c          338 g          198 t
ORIGIN      
        1 cgtgggatga cctgagaacg cacttcggct ggctggagca ccactacagc ggagggacac
       61 accggcagcc cgttacgcca taacggaggc gaagtgatgt tcccacctgc cggagcgcct
      121 attggacagg atgtgttcgg ggcaggatag gtgccggttg tgaataagga tttggctctt
      181 atcgggttcc ggggtggtga gaggcctcac ccgaccaagc cggagacaag ggcgccgagc
      241 agagccttgc cgcggcgacg gacgttgtgc acgaactgga agaaaccgag atagagcggc
      301 agtttgtctt gcgagatgcc ccggtgcgga cgcagccagg agcgcagcag cgaccagaag
      361 ccctcgattg tattgacatg tatctcgcag aagccgtcgc cgtcctcgtc gcgggcatat
      421 tcgccgcggg catggcagac ggtcttgtgc ggatagcccc aggcggacag gcgggcatag
      481 acgttgtatt catcggtgtg gatcaacgtg ccaggcacga ccgatgccgc aatgaccggc
      541 ttgatcgtgg tctgctgcac attgggcaac atgcgcagca cgacttgacc gccgcgctgg
      601 atcaggccga ggatcggtgg cttgtccttt tccaacgtgc cgcgtcccgg cgcgcccgca
      661 agtctgcgcc gccgtcccaa gcgccccttt tttcgacttc ggctggttgg cctttgtgtc
      721 cggccacgat gtagacctcg tcggcttcga cctcgccttg cagtttggcc gctcgggttc
      781 ggctgaccag accatggcga agatgctcgg tcatggcctg cgcctccgag gtgcacagcc
      841 caagttcctc gccgatctgc tggttggaga ggttcagccc catcaggtag aggcacgata
      901 cccatacccg cagtggctgg tgatgtcccg ccagcaccgt gccgctcagg tcgtcaaaac
      961 ggccatggca ggccttgcac aggtagcgct gccgatgcct ctgtccgtcg tcatggccgt
     1021 tgcggatgac c
//
LOCUS       DASRPQ010001152         1639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1395153, whole genome shotgun sequence.
ACCESSION   DASRPQ010001152 DASRPQ010000000
VERSION     DASRPQ010001152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1395153"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            26..>1639
                     /locus_tag="VFD73_13125"
     CDS             26..>1639
                     /locus_tag="VFD73_13125"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HZI74939.1"
                     /translation="MAPETSQRLSELARSLGVQEKSIWCSAYLALLSLLSGTDEGLGA
                     VITQGRPEVPGGEKMIGVFLNALPTRVRVSGRSWAELIAATDRELREQHTFRHYPLAE
                     IQRLTGLDLSATMFHYSNWHVYYEGVDQEGTPDEWVPQKVGGWQETNYLLNFLAGKDD
                     KSQRYSLSIGADTQVFDAEFRERIRGYAVRIIDAIASDATVVIDKSGLLGDAERHRQL
                     IEWNATERAYPEQRCIHELFEWQVERTPDAVAVVHESGELTYAELNRRANQLAHQLIE
                     RGVGPEVRVGLCMQRSPQMVIGLLGILKAGGCYVPLDPNYPRKRLEYLLQDSAVEWVV
                     SEPAVEESLGLAGLSGGAGHRAPYIRVVRVESESAERDGSASRNPVTGVTAANLAYVI
                     YTSGSTGQPKGVGIAHRSTVSLLCWSGEQWDEAERAGVLASTSICFDLSVYELFVPLT
                     QGGQCVLIESILGLREWVHRERVSLINTVPSAAKALVEKGAVPGSVRVMNLAGEPLKR
                     ELVDELYGLGAAQRIYDLYGPSESTTYSTY"
BASE COUNT          308 a          405 c          627 g          299 t
ORIGIN      
        1 tgccagcgcc taccttgcgt gcgatatagc gcccgagacg agtcagcggc tgtcggagct
       61 tgcgcgctca ctgggtgtgc aggagaagag catctggtgc tcggcctatc tggcactgct
      121 atccctgctc agtggaaccg acgaggggtt gggggcagtg attacacaag gccgtccgga
      181 ggttccgggc ggcgagaaga tgatcggcgt gtttctgaat gcgctcccca ctcgggtgcg
      241 tgtgtcgggt cggagctggg cagagttgat cgctgcgacg gatcgcgagc tgcgggagca
      301 acacaccttt cggcattacc cgctcgcgga aatccaacgg ctcacaggac tcgatctttc
      361 ggcgacgatg ttccattact cgaactggca cgtgtattac gaaggcgttg atcaagaagg
      421 aactcccgat gagtgggtac cgcagaaggt cggtggctgg caggaaacga actatctgtt
      481 gaacttcctc gcggggaagg acgacaagag ccagcgctac agtctgagca tcggtgcaga
      541 tacgcaggtg ttcgatgcgg aattccgtga gcggatacgc gggtatgcag tcaggatcat
      601 tgatgcgatc gccagtgatg ccacggtagt catcgacaaa tcggggctgt taggtgatgc
      661 cgagcggcat cggcaactga tcgagtggaa cgcgacggag cgagcgtatc cggaacagcg
      721 gtgcattcat gagttgttcg agtggcaggt ggagcgaacc cccgatgcgg tggcggtggt
      781 gcacgagagc ggggagctca cgtatgcgga gctgaaccgc cgggcgaacc agttggcaca
      841 tcagctgatc gagcgcggtg taggccccga ggtgcgagtg ggactgtgca tgcagcgctc
      901 cccgcagatg gtgatcggac tgttggggat tctgaaggcc ggtgggtgct atgtgccgct
      961 ggacccgaac tatccgcgca agcgcctgga gtatctgctg caggacagcg cggtggagtg
     1021 ggtggtaagc gagccggcgg tggaggagtc gctgggactg gcggggctga gcgggggagc
     1081 gggtcaccgt gcgccttata taagagtcgt gagggtcgag tccgagtccg cggaaaggga
     1141 tgggagcgcg agccgcaatc cggtcacggg ggtcacggcg gccaatctgg cctatgtgat
     1201 ctacacctcc ggaagcaccg ggcaacccaa gggggtgggg atagcgcacc gaagcacggt
     1261 atcgctgctg tgctggtcgg gagagcaatg ggatgaggcg gagcgagccg gcgtgctggc
     1321 gagcacctcg atctgttttg acctctcggt gtacgagctg ttcgtgccgc tgacgcaggg
     1381 cggacagtgc gtgttgatcg agtcgattct gggactgagg gagtgggtgc atcgggagcg
     1441 ggtgagtctg atcaacacgg ttccctcggc ggcgaaggcg ctggtggaga agggggccgt
     1501 gccggggtcg gtgcgggtga tgaacctggc gggggagccg ctgaagcggg agctggtgga
     1561 tgagctgtac gggctggggg cggcgcagcg gatttacgac ctgtacggcc cgtcggagag
     1621 cacgacgtat tcgacgtac
//
LOCUS       DASRPQ010001153         2001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_765520, whole genome shotgun sequence.
ACCESSION   DASRPQ010001153 DASRPQ010000000
VERSION     DASRPQ010001153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2001
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_765520"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2001
                     /locus_tag="VFD73_13130"
     CDS             <1..>2001
                     /locus_tag="VFD73_13130"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HZI74940.1"
                     /translation="LMFISDFAIQRPIVTVTAMVALVVFGIFALLNLHTDEFPDIQQP
                     VVGVTIAYPGASPSEVTREIIDPVEDAIFSISGVDGEKSTCSATDGLASCTIFFEFEK
                     PIQQASQDIRDAISTKREDLPTEMKEPVLTRFDPSELPVVTLTLTSETVPAATLTRLA
                     DPGVTRSLRAIGGVAQVSVVGGIEREMTVELQPAALEAAGVSVSQVVQALEAQNLAAP
                     VGRLTGGLEERTIRLRGRPEGPSDFAQLVIAEREGKSIRLGQVAKVYDGTEEPRTLAL
                     FNGKQAVGVEIIKSKGYSTTQVSDAIKAQVKELQRTMPHDVKLEIVQDAGQRVSRAVA
                     NVQEALIEGALLTVLVVFLFLNSWRSTVITGLALPVSVLASFIAVWAFGFTLNTMSLL
                     GLSLAIGILIDDAIVVRENIVRHIEMGKDHLRASHEATDEIGLAVAATTFSIVAVFVP
                     VAFMYGIAGQWFKPFALTIACAVLVSLFVSFSLDPMLSAYWADPQTEAHERRNPIARA
                     LERFNRWFDRQAERYQGVIAWALDHRLAMVLIALGSFFGAILLQATVGGAGFIPVSDR
                     SEINFIIQTPPGSSLEYTRLKSEEVERIARRHPEVSYTYTAIGTPIPLIAPGVDQALT
                     YVQLTPKRDRHISQDALGEQLRKELARVGGASVSVFTSGFGG"
BASE COUNT          356 a          635 c          634 g          376 t
ORIGIN      
        1 cgctgatgtt catctccgat tttgccattc agcgtcccat cgtcacagtc accgccatgg
       61 tggcgctggt ggtgtttggc atctttgctc tcttgaacct ccacaccgac gagttcccgg
      121 acattcagca gccggtcgtc ggcgtcacca ttgcctatcc cggtgcctcg ccctcggagg
      181 tgacccgcga gatcatcgat ccggtcgagg atgccatctt cagcatcagc ggcgtcgatg
      241 gcgagaagtc gacgtgctcc gccaccgatg gcctcgcctc ctgcaccatc ttcttcgaat
      301 tcgagaagcc gatccagcag gcctcgcaag acattcgcga cgccatctcg accaagcgcg
      361 aggatctgcc gaccgaaatg aaagaaccgg tgttgacccg gttcgatcct tcggaactgc
      421 cggtcgtgac gctcacgctg acgtcggaga cagtcccggc cgccacactc acacgtttgg
      481 ccgacccagg ggttacccga tcgctccggg cgatcggcgg cgtggcgcag gtgagcgtgg
      541 tgggtgggat cgagcgcgag atgacggtgg agctccagcc cgcggctctg gaggctgctg
      601 gggtcagcgt ctcccaggtg gtgcaggcgc tcgaggccca gaaccttgcg gcgccagtgg
      661 gcaggctcac cggaggtctg gaagagcgca cgatccggct ccgtggccgg cccgaaggtc
      721 catccgactt tgcccagctg gtcattgcgg aacgggaggg caagtcgatt cgcctaggac
      781 aggtggctaa agtctacgat ggcaccgagg agccgcgcac cctcgcgctc tttaatggaa
      841 agcaggccgt cggcgtcgag atcatcaaat cgaagggcta cagcaccacc caggttagcg
      901 acgcaatcaa ggcgcaggtc aaagaactgc agcgcacgat gccgcacgac gtcaagctcg
      961 agatcgtgca ggatgccggt cagcgggtga gccgcgccgt cgccaacgtg caggaagcgc
     1021 tcatcgaagg cgcgctcttg acggtgctgg tcgtgtttct cttcctgaac tcctggcgat
     1081 cgacggtcat taccggcctg gccctcccgg tctcggtgct ggccagcttc atcgcagtgt
     1141 gggcgttcgg gttcaccctg aacaccatgt ccctgctggg actttctctg gcgatcggaa
     1201 tactcatcga cgacgccatc gtggtccgcg agaacatcgt gcgccatatc gaaatgggaa
     1261 aggaccatct cagggcgtcg cacgaggcca ccgatgagat tggactggcg gtggcggcca
     1321 ccaccttctc gatcgtcgcc gtgttcgtgc cggtggcgtt catgtatggc atagcggggc
     1381 agtggttcaa gccgtttgca ctgaccatcg cctgcgcggt gctggtgtcg ctgttcgtga
     1441 gcttctcact cgacccgatg ttgtcggcct actgggccga tccccagacc gaggcgcacg
     1501 agcggcgcaa tcccattgcc cgggccctgg agcgcttcaa ccgctggttc gaccgccagg
     1561 ccgagcgcta ccagggagtg atagcctggg cgctcgatca ccgtctggca atggtcctca
     1621 tcgccctcgg ctcattcttt ggagcgatct tgctgcaggc gacggtgggt ggagcgggct
     1681 tcatcccggt gagcgaccga agcgagatca acttcatcat tcagacccca cccggctcga
     1741 gtctggaata caccaggctc aaatcggagg aggtggagcg cattgcccgg cgccatccgg
     1801 aggtgtccta cacgtacacc gcgatcggga cgccgattcc gctgatcgct cctggcgtgg
     1861 atcaggcgct gacctacgtg caactcaccc ccaaacggga tcggcatatc agccaggacg
     1921 cgctgggtga gcagctccga aaggaactcg cccgggtcgg aggagccagc gtatcggtct
     1981 tcaccagcgg cttcggcgga g
//
LOCUS       DASRPQ010001154         1238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4208841, whole genome shotgun sequence.
ACCESSION   DASRPQ010001154 DASRPQ010000000
VERSION     DASRPQ010001154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4208841"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..428
                     /locus_tag="VFD73_13135"
     CDS             <1..428
                     /locus_tag="VFD73_13135"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HZI74941.1"
                     /translation="ISTYQGAILIYAGLITPFSVYLLTSFFRTLPRELFEAARIDGAS
                     DLLILLKIVIPLSLPALLTLVVVNALYVWNDLLIAIIFLQDDAKRTLMAGISVFQGRY
                     NDQIPLTMAGMVFASAPMIILYITFQKHYIQGLMAGSVK"
     gene            425..>1238
                     /locus_tag="VFD73_13140"
     CDS             425..>1238
                     /locus_tag="VFD73_13140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74942.1"
                     /translation="MSADIVLQNESLRVAIRPRVGGTITQIEHKQLGLSVLGEVPWEA
                     VDAPLEHRSVLNERTWLTRYTGGWPLLFPNGGDACTFEGVFHGFHGEASISPWDVDAD
                     KSVVHLSRRFDTVPVRMQREISLDRDLLTIRETAEVEGDDPVTVMWGHHPTFGSDLLA
                     EDFEIQSGGCSVTVDQSYDPPTNPLQPGAAGPWPMIQGKSGPVDLRRPLNHAIGGRIA
                     AQAYLHDFDTPWLSIRRLDDAAAVALSWDAAIFPCAWLWFELGGTAGAPWSGR"
BASE COUNT          216 a          384 c          383 g          255 t
ORIGIN      
        1 tgatcagcac ctaccagggc gcgatcctca tctatgccgg cctgatcacg ccgttctcgg
       61 tctatctgct caccagtttt ttccgcacct tgccacgcga gctgttcgag gcggcgcgga
      121 tcgacggcgc gagcgacctg ctgatcctgc tgaagatcgt gatcccgctg tcgttgccgg
      181 cgttgctgac gctggtggtc gtgaacgcgc tctatgtctg gaatgatctc ctgatcgcga
      241 tcattttcct gcaggatgac gccaagcgga ccctcatggc gggtatcagc gtgttccagg
      301 ggcgctacaa tgaccagata ccgctcacca tggccggcat ggtgtttgcc agcgcgccga
      361 tgatcatcct ctacatcaca ttccagaaac actacatcca gggcctgatg gccggatccg
      421 tgaaatgagc gccgatatcg ttctgcaaaa cgaatccctt cgtgttgcca tccggccgcg
      481 agtcggcggc accatcaccc aaatcgagca caagcagctt gggctttcgg tgcttggtga
      541 ggtgccgtgg gaagcagtcg atgccccgct cgaacaccgc tcggtactga atgagcggac
      601 atggctcaca cgctacaccg gcggttggcc gctgctgttt ccgaatggcg gcgatgcctg
      661 cacgtttgaa ggggtatttc acgggtttca tggcgaagcc tccatcagcc cctgggatgt
      721 cgacgcggac aagtcggtgg tgcacctgag ccgccggttc gatacggtgc ctgtccggat
      781 gcagcgggaa atctccctcg accgggacct gctcacgatc cgagaaacag cggaggtcga
      841 gggagacgat cctgtcacgg tcatgtgggg ccaccatccg accttcgggt ccgacctact
      901 ggccgaggat ttcgagatcc agagcggcgg ctgcagtgta acggtggacc agagttatga
      961 cccgcccacc aacccgctgc agccgggagc ggctgggcca tggcccatga tccaggggaa
     1021 gagcgggccg gtcgatcttc ggcgcccttt gaaccatgcc attggcgggc ggatcgcggc
     1081 ccaggcttac ctgcatgatt ttgacacacc atggctctcg atccgccggc tggacgacgc
     1141 agctgcggtc gccttgtctt gggatgcggc aatttttcca tgcgcgtggc tctggttcga
     1201 gctcggtggc accgccggcg ccccttggtc cggtcgca
//
LOCUS       DASRPQ010001155         1033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3593976, whole genome shotgun sequence.
ACCESSION   DASRPQ010001155 DASRPQ010000000
VERSION     DASRPQ010001155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3593976"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..945)
                     /locus_tag="VFD73_13145"
     CDS             complement(<1..945)
                     /locus_tag="VFD73_13145"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013661.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HZI74943.1"
                     /translation="MADQWIPSQFFFDQNYLSKVGVERPRDILFIVAHHSAGIESSDI
                     PWLTTRGQVSAHKYVSRSGNRYQLVKDENACWACAVDPQYEIRPPRMGDRWARNENWP
                     ALQFEMENTGTDPFTDAQYDAAADWTAAWVQAYGIPADRNNILGHRELTRHPQHQDPN
                     DLWDWTRFMNLVKTRLDSAGYVDYYIEGPPTISRQLFHDTLAANPRSPITDDADRYYD
                     LCMQYRVNPAVALAFFIHESSAGTKGVARVTKSIGNIRTTPGYRDYQGYRAYDTWEQG
                     IEDYYKLIRDLYIDGWGLHTVGQILVRYAPPADNNDTDS"
BASE COUNT          171 a          297 c          353 g          212 t
ORIGIN      
        1 tgagtccgtg tcgttgttgt cggcgggcgg cgcgtagcgc accaggatct ggccaacggt
       61 atgcaggccc cagccgtcga tatagaggtc acggatcagc ttataataat cttcgatgcc
      121 ctgctcccag gtatcatagg cccggtagcc ctggtaatcg cggtagccgg gggtggtgcg
      181 gatgttgccg atcgacttgg tgacgcgggc cacgcccttg gtaccggcgc tgctctcatg
      241 gatgaagaag gccagcgcca ccgccgggtt gacgcggtac tgcatgcaga gatcatagta
      301 gcggtccgcg tcgtcggtga tcgggctgcg cgggttagcg gccagcgtat cgtggaaaag
      361 ctgccggctg atcgtcggtg gcccctcgat gtagtagtcc acgtagcccg cgctgtccag
      421 gcgcgtcttg accagattca tgaagcgtgt ccagtcccac aggtcgttgg gatcctggtg
      481 ctggggatgg cgggtgagtt cgcgatggcc caggatgttg ttgcggtcgg cggggatgcc
      541 gtaagcctgg acccaggcgg ccgtccagtc cgcggcggcg tcatactgcg cgtcggtgaa
      601 gggatcggtg ccggtgttct ccatctcgaa ctggagcgca ggccagttct cgttgcgcgc
      661 ccagcggtcg cccatgcgcg ggggccggat ctcgtactgg ggatcgacgg cgcaggccca
      721 gcaggcgttc tcgtccttga ctaactggta gcgattgccg ctacggctca cgtacttgtg
      781 cgcggagacc tggcccctgg tcgtgagcca ggggatatcg ctggactcga tcccggcact
      841 gtggtgggca acgatgaaca gaatgtcccg aggtcgctcg accccaactt tgctcaaata
      901 gttttggtcg aagaagaatt gcgaggggat ccactgatca gccaagtact ccctcctggt
      961 gaggggaaac taggaagctc cccgttggaa cattccggcg cctaccctct ttcgacgcgg
     1021 gtacccatgc gct
//
LOCUS       DASRPQ010001156         1873 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1395759, whole genome shotgun sequence.
ACCESSION   DASRPQ010001156 DASRPQ010000000
VERSION     DASRPQ010001156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1873
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1395759"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..443)
                     /locus_tag="VFD73_13150"
     CDS             complement(<1..443)
                     /locus_tag="VFD73_13150"
                     /inference="COORDINATES: protein motif:HMM:NF013012.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74944.1"
                     /translation="MSRPGNPAMEWVLGIETSCDETSAAVVRTRNGEVTLASVVILSQ
                     DVHRIFGGVVPELASRAHVPAIGAVIDQSLAEANLRLQEIDGIAVTAGPGLVGALLVG
                     VMYAKTLAFSLDRPLIGINHLEGHLFAPTLEDTTLEPPFIGLLVSG"
     gene            complement(427..966)
                     /locus_tag="VFD73_13155"
     CDS             complement(427..966)
                     /locus_tag="VFD73_13155"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HZI74945.1"
                     /translation="MSKQWILVAAIVGSLGAGAALLAEFDGKEQRVEIGAPAPDFKAL
                     DLATGDSVSLRQHYRGAVTLVNIWATWCAPCRVEMPSMEKLFLDVAPQGFKIAAVSID
                     EGEPDAVRDFGEKLGLSFDLLQDRSTKVQRIYQTTGVPESFLLNRQGIIVKRVIGAHD
                     WNSDVNRGLIQRLLDEPAR"
     gene            complement(968..1633)
                     /gene="rpe"
                     /locus_tag="VFD73_13160"
     CDS             complement(968..1633)
                     /gene="rpe"
                     /locus_tag="VFD73_13160"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HZI74946.1"
                     /translation="MTVRISPSILSADLGRLREEVESALAGGAEWLHVDVMDGHFVPN
                     LTFGAPIIRALRSFTDRPLDVHLMVERPEHYLDEFADAGANIFTFHPEATIHVQRHLT
                     AARERGMLAGLALNPSTPVSVLEELLGDVDLVLVMSVNPGYGGQQYLPQASDKIRRVR
                     RLMDQRRMAATLEVDGGITTETIGSAWEAGADTFVAGTAVFGTNDPAQAVRDLKRHCA
                     VKV"
     gene            complement(1630..>1873)
                     /locus_tag="VFD73_13165"
     CDS             complement(1630..>1873)
                     /locus_tag="VFD73_13165"
                     /inference="COORDINATES: protein motif:HMM:NF015734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HZI74947.1"
                     /translation="LVLSAGPVLVAVPDVIGLNVAQAAKILAAAGVRVGSVDSTSGGG
                     EDAGVVVATRPAAGVGRARGSTVALVVSRGSGSSPP"
BASE COUNT          379 a          613 c          560 g          321 t
ORIGIN      
        1 ccgctcacca ggagaccgat gaacggaggc tcgagggtgg tgtcctcgag cgtgggtgcg
       61 aagagatgac cctccagatg attaatgccg atcagcggac gatcgagact gaaggcgaga
      121 gtcttcgcgt acatcacgcc caccagcagg gcaccgacca ggcccgggcc cgccgtaacc
      181 gcgattccat cgatttcctg aaggcgcagg tttgcctccg ccagcgattg gtcgatcacc
      241 gcgccgatgg cgggcacatg ggcgcgactg gccagttcgg ggacgacccc gccgaagata
      301 cggtgaacgt cctgggagag gatcaccacc gatgccagcg tcacctcgcc gtttcgagtg
      361 cggacgacag cagcagaggt ttcgtcgcag gaagtctcga tgccgagcac ccattccatg
      421 gcggggttac cgggccggct catcgagcag gcgctgaatc agtccgcggt tcacatccga
      481 attccagtca tgggccccga tgacacgctt gacgatgatc ccttggcggt tcagcagaaa
      541 gctctccggt acaccggtag tctgataaat ccgttgcacc ttggtgctcc ggtcctgcaa
      601 caaatcgaaa ctgaggccca acttctctcc gaagtcccgc accgcatcag gctcgccctc
      661 atcaatgctg acagcggcga tcttgaatcc ctgcggcgca acatccagga acagcttttc
      721 catggagggc atctcgacgc gacagggggc gcaccaggtg gcccagatat tcaccagcgt
      781 cactgcccct cgatagtgct gccgcaggga gacggagtcg ccggtggcga gatcgagcgc
      841 cttgaaatcg ggggctggtg cgccgatctc cacccgctgc tccttgccgt caaattcagc
      901 cagcagagcc gccccggcac ccaggctccc cacaatagcg gcgaccaaaa tccactgctt
      961 cgacatctca gaccttgacg gcacaatgtc gtttcagatc acggaccgcc tgagccggat
     1021 cgttggtacc gaacaccgcg gtgccggcca caaacgtgtc ggcccccgcc tcccaggcgc
     1081 tgccgatggt ttcggtagta atgcccccat ccacctcgag ggttgcagcc attcgtcttt
     1141 ggtccatcaa acggcggacg cgacgaattt tatcgctggc ctggggcagg tattgctgcc
     1201 caccgtaccc tgggtttacg gacatcacca gcaccagatc gacatctccg agaagctcct
     1261 ccagcacgga cactggtgtc gacggattca gtgccaggcc agcaagcatg ccccgctcgc
     1321 gggccgccgt gagatggcgc tgcacatgga tagtggcctc ggggtgaaac gtgaaaatgt
     1381 tcgcgccagc gtcggcgaat tcgtcgaggt agtgctctgg cctttctacc atgaggtgca
     1441 catccagcgg ccgatcggta aagctccgca gcgcccgaat gatcggagca ccgaacgtca
     1501 ggttcggtac gaagtgacca tccatgacgt cgacatgaag ccattccgcc ccgcccgcca
     1561 gagccgactc gacctcctca cggaggcgtc ccaggtcggc gctcaggatg ctgggtgaga
     1621 ttctgacggt catggtggag agcttcctga cccacggctc accacgaggg caacggttga
     1681 tccacgggca cgtccgacgc cggcggccgg tcgcgttgca acgacaactc cggcgtcttc
     1741 acctccgccc gaggtggaat cgacagatcc gacccgaaca ccggctgcgg ccagaatctt
     1801 ggcggcctga gctacgttga ggccgatgac gtcgggaaca gcaaccagca ccgggccagc
     1861 actgaggacc aac
//
LOCUS       DASRPQ010001157         1447 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2956113, whole genome shotgun sequence.
ACCESSION   DASRPQ010001157 DASRPQ010000000
VERSION     DASRPQ010001157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1447
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2956113"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1447)
                     /locus_tag="VFD73_13170"
     CDS             complement(<1..>1447)
                     /locus_tag="VFD73_13170"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HZI74948.1"
                     /translation="WYLVPAEVFAERNRQGIGRFTGGLTANWRPLTWLTTRATFGYDV
                     TNRQDTQFWPTGEINPSAYPTQNEGELDVTRAQTSQLSVDLFSAASYQLSSAWNGRTA
                     VGGQFFRNLNTNSFAQGRGLARGTESIFGSATTDASDDYVESRSAGGFVDQQMSYRNR
                     LFLTAGLRLDDNSAFGKNFNTRPLPKLSVSWVAREQRDQGTLNTLRLRAAYGQSTQQP
                     GSIDALRFYGQAAVRKDAVSGSGVTLANLGNADLKPELSQEIEAGFDAGLLSNRVTVE
                     ATAFYKQTRDALIQREIVPSLGTTTTQFFNLGKVSNRGVELRLDTRIIDKPNFAWDLT
                     FTGSVTKNNLDDLGEGVEPITLGFIQRHVEGYPLGGIWDRPILSYNDANGNGVIEPAV
                     YDDAGNVVVPAEYTVGDTAVYRGSAIPTREFGLRSNFSFFRNLFSLGALFDYRGGNWI
                     ENGTDSFRCGGGVIYCRALIDPTASLKDQAAA"
BASE COUNT          272 a          439 c          456 g          280 t
ORIGIN      
        1 gctgcagcct ggtccttgag cgaggcagtc ggatcgatca aggcccggca gtaaatgacg
       61 ccgccaccgc agcggaacga atcagttccg ttctcgatcc agttcccgcc ccgatagtca
      121 aacaacgcgc cgaggctgaa cagattgcgg aagaacgaga agttgctcct cagcccgaac
      181 tcgcgggtgg gaatggccga gccccgataa actgcagtgt ctccaacggt gtactcggcc
      241 gggacaacca cgttccccgc atcatcgtac accgcgggct cgatgacgcc gttgccgttc
      301 gcatcgttat acgagagaat cggccggtcc cagatgccgc cgagcgggta gccttccacg
      361 tgccgctgga tgaagcccag tgtaatgggc tccactccct cgcccaggtc gtccaggttg
      421 ttcttggtga ccgagccggt gaaggtcagg tcccaggcaa agttcggctt gtcgatgatg
      481 cgggtatcca gcctcagctc gactcctcgg ttggaaacct tgcccagatt aaagaattga
      541 gtagtcgtag ttcccaacga aggcacgatc tcacgctgga tcagtgcgtc acgggtttgc
      601 ttgtagaagg cggtcgcctc gacggtcacc cggttggaga gcagaccggc gtcgaacccg
      661 gcctcgatct cctgcgagag ctctggcttg aggtcggcat tgcccaggtt ggcaagggtt
      721 accccactgc cggagacggc gtcctttcga acggcggcct ggccgtagaa tcggagcgca
      781 tcgatgctcc ccggctgctg ggtcgattgg ccgtaggctg cgcggagccg cagggtgttg
      841 agggttccct gatcccgctg ctcccgcgcg acccacgaaa cgctcagctt gggaagtggc
      901 ctggtgttga agttctttcc aaaggcactg ttgtcgtcca gccggaggcc agccgtcagg
      961 aacaggcggt tccgataact catctgctga tcgacgaacc caccagcgga ccggctctcc
     1021 acatagtcat ccgatgcatc ggtcgtcgcg gagccgaaga tggactcggt gccgcgggcc
     1081 agacctcgtc cctgggcaaa gctgttggtg ttgagattcc ggaaaaactg gcctccgacg
     1141 gcggttctgc cgttccaggc agaggagagc tgatagctgg cggcagagaa gagatctact
     1201 gacagctggg atgtttgagc ccgggtaaca tcgagctcgc cttcattctg agttggatag
     1261 gctgaggggt tgatttcgcc ggtgggccag aactgcgtgt cctgccggtt ggtcacatcg
     1321 tacccgaagg tcgccctcgt ggtgagccaa gtaagcggcc gccagttcgc cgtgagcccg
     1381 ccggtgaatc gtccgatgcc ctgccgattc cgctccgcaa agacctccgc cggcaccagg
     1441 taccagc
//
LOCUS       DASRPQ010001158         2042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4209169, whole genome shotgun sequence.
ACCESSION   DASRPQ010001158 DASRPQ010000000
VERSION     DASRPQ010001158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4209169"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..325)
                     /locus_tag="VFD73_13175"
     CDS             complement(<1..325)
                     /locus_tag="VFD73_13175"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HZI74949.1"
                     /translation="MPPTLDDRALLARLIGFDTTSRLSNLALVEFLSDYADRPGIRIV
                     RNPSPDGNKSNLIMMAGPEDTGRNGLVLSGHTDVVPAEEADWRSDPFTLTDRDGCYVG
                     RGAADM"
     gene            complement(376..1176)
                     /gene="tpiA"
                     /locus_tag="VFD73_13180"
     CDS             complement(376..1176)
                     /gene="tpiA"
                     /locus_tag="VFD73_13180"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HZI74950.1"
                     /translation="MTERQLIFAANWKMNHGPAEARSFAQKFLSLTSSVEGRGLWFFP
                     PAVSLAALSEAMKGRPDITIGAQNVHWEPSGPFTGGISIPMVTEVGARLTLVGHSERR
                     HLFGETDEQVARKTRAALNAGITPLVCVGETLAERDGGRTEQVIVRQLAPVLQAIPPD
                     AWARVLLAYEPVWAIGTGKNATPDDAAQIHELIRMELDRSGVPGRISILYGGSVNKGN
                     VAFLLSRPQIDGVLVGGASLDPTGWADLVDEGSRAKVRPSGGFDIVPG"
     gene            complement(1223..>2042)
                     /gene="pgk"
                     /locus_tag="VFD73_13185"
     CDS             complement(1223..>2042)
                     /gene="pgk"
                     /locus_tag="VFD73_13185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HZI74951.1"
                     /translation="EEKNDASLAERFAALGDLYVNDAFGSAHRAHASTEAIARILKPA
                     VSGFLMERELRYLGDALHDPKRPFVAVLGGAKISGKIDLIEALLPKVDEILLGGAMAC
                     TFFKGMGLQTGKSLVEPDKLDLARTLMQKAGKKLVLPTGAVVARELAPNVETRTVTRE
                     AIPPDWAVYDIDEATERRFASSIEGAGTAVWNGPMGVFETSPFDHGTLAIARSMAQAT
                     KRGTITVIGGGDSAAAVAQAGLAGEITHVSTGGGASLEFLEGKELPGVAVLDDA"
BASE COUNT          366 a          677 c          636 g          363 t
ORIGIN      
        1 tcatatcggc tgctccgcgt cccacgtagc agccgtccct atcggtgagc gtgaaagggt
       61 cggagcgcca gtcggcttcc tcggccggca ccacatcggt atgcccggag aggaccagac
      121 cattccggcc ggtgtcctcc gggcctgcca tcatgatgag gttgctcttg tttccgtcgg
      181 gcgacggatt gcgaacgatg cgaatgcccg gccggtcggc gtagtcggaa agaaactcca
      241 ccagcgcgag attactgagc cggctcgtgg tgtcgaaccc gatgaggcgg gccagcagtg
      301 cacggtcatc cagggtgggc ggcatcctgc tcagctgctg ggaggggaag ccaacgaagt
      361 gcggccgatc ttgtcctacc cggggacaat atcgaagcca ccggagggtc tgaccttggc
      421 ccgagagccc tcgtccacca gatcagccca cccggtcggg tcgagactgg cgccacccac
      481 cagcacaccg tcgatctgtg gccggctgag caggaacgcc acgttgccct tgttgacact
      541 cccgccgtag agaatcgaaa tgcggcctgg gacaccactc ctgtccaact ccattcggat
      601 cagctcatga atctgggccg catcgtcggg cgtggcattc ttgccggtgc cgatggccca
      661 gaccggctcg tatgccagga gcactcgagc ccacgcatcc ggcggaattg cctgcagcac
      721 cggcgcgagc tggcgcacga tcacctgttc tgtccggcca ccatcgcgct cggccagagt
      781 ctcaccgaca cagaccagcg gcgtgatgcc ggcattcagt gcggcccggg tcttccgggc
      841 aacctgttca tcggtctccc cgaagaggtg gcgccgctcc gaatgtccca ccagtgtgag
      901 ccgggcaccg acttcagtga ccatggggat ggagatcccg ccggtaaacg gaccgctcgg
      961 ctcccaatgc acattctgcg cgccgatagt gatgtcgggc cgtcccttca ttgcctcgct
     1021 caaagccgcg agggaaacgg cgggagggaa aaaccacagc ccccggccct cgactgaact
     1081 ggtgagggaa aggaatttct gagcgaacga gcgagcttcc gccggcccat gattcatctt
     1141 ccagttggcc gcaaagatga gctgacgctc ggtcatagag cgtcagaccc gagcatggcg
     1201 aaggatctct ccatgacgcg catcatgcgt cgtccaacac cgccacgccg ggaagctcct
     1261 ttccctccag gaactcgagg gaggcgcccc cgccggtcga gacgtgggtg atttccccgg
     1321 cgagaccagc ctgcgcgacg gccgccgcgg agtcgccgcc gccgataacg gtaatcgtgc
     1381 cccgcttggt ggcctgagcc attgagcggg cgatggcgag tgtgccatga tcgaatggcg
     1441 aagtctcgaa cacgcccatg ggtccgttcc acaccgccgt gccggcacct tcgatgctcg
     1501 aggcaaagcg ccgctcggtc gcctcatcga tgtcgtacac ggcccagtcg ggaggaatcg
     1561 cttcccgggt gacggtcctg gtttcgacat tcggtgccag ttcacgggcg accaccgcgc
     1621 cggtcggcag cacgagcttc tttcccgcct tctgcatcag agtgcgcgcc agatccagct
     1681 tgtccggttc gaccagtgac ttgccagttt gcaggcccat tcccttgaag aaggtacagg
     1741 ccattgcccc gcccagcaga atctcgtcga ccttgggcag cagcgcctcg atcagatcga
     1801 tcttgccgct gatcttggct ccgcccagta ccgcgacgaa cggccgcttg ggatcgtgga
     1861 gcgcatctcc caggtagcgg agctcccgtt ccatcaggaa tcccgacacc gcgggcttga
     1921 gaattcgtgc aatagcttcg gtgctggcgt gggcccgatg ggcggatccg aaggcatcgt
     1981 tgacgtagag atcgcccagc gccgcgaagc gctccgcgag cgaggcgtca tttttttcct
     2041 cg
//
LOCUS       DASRPQ010001159         1014 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2329782, whole genome shotgun sequence.
ACCESSION   DASRPQ010001159 DASRPQ010000000
VERSION     DASRPQ010001159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2329782"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..274
                     /locus_tag="VFD73_13190"
     CDS             <1..274
                     /locus_tag="VFD73_13190"
                     /inference="COORDINATES: protein motif:HMM:NF014448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HZI74952.1"
                     /translation="LAEEAKERFGLEDCAVLHRTGRLEIGETSLLVAVSCGHRAESFE
                     AGHWLVNEIKKRVPIWKKEVWEDGEAWIEGPESLGMQQAPAGMRPQ"
     gene            276..794
                     /locus_tag="VFD73_13195"
     CDS             276..794
                     /locus_tag="VFD73_13195"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HZI74953.1"
                     /translation="MTSHPHSYSRYCMQCGQRLTTAIPEGDTRRRMVCLDCGFIHYIN
                     PRPVAGTIPVREDGKILLGRRDIEPRRGFWVFPGGFMDVGETAEEAAMRETLEEVHLE
                     VRNLQLVGVFTRLQPGVVVIVYEAEAVGQAEVGHETSEIGWFAPEEIPWEEIAFDSTE
                     AALRSWVARRQP"
     gene            complement(796..>1014)
                     /locus_tag="VFD73_13200"
     CDS             complement(796..>1014)
                     /locus_tag="VFD73_13200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74954.1"
                     /translation="RPVNFMAGIPGRSFTVRELTDAGVRRISLSTSLYKAAMGAVSAA
                     LKEVSGQGTFGYLDQAMPTAELNGYLGS"
BASE COUNT          191 a          311 c          352 g          160 t
ORIGIN      
        1 actggcggaa gaagcgaagg agcggttcgg gctggaagat tgcgccgtcc tgcatcgcac
       61 gggccgcctc gagatcggag agacgagcct gctggtagcc gtttcctgcg gccatcgggc
      121 agagtccttc gaagcggggc actggctggt gaacgaaatc aagaagcgcg tccccatctg
      181 gaaaaaggaa gtctgggagg acggcgaagc gtggatcgaa ggccctgagt ccctcgggat
      241 gcagcaggcg ccggcaggca tgcgccctca gtgagatgac gagtcacccg cattcctaca
      301 gccgctactg catgcagtgc gggcaacgcc tgaccaccgc catcccggag ggtgacaccc
      361 gccgccgcat ggtctgcctg gactgcgggt tcatccacta catcaatccc cgcccagtgg
      421 ccgggacgat cccggtgcgc gaggacggga agatcttgct cggacggcgc gacatcgaac
      481 cgcggcgtgg gttctgggtg ttccccggcg gcttcatgga tgtaggcgag accgccgagg
      541 aagccgcgat gcgggagacc ctggaagagg tccacctgga agtccgcaac ctgcagctgg
      601 tcggtgtgtt cacgcggctc cagcccggcg tcgtcgtgat cgtttacgaa gcggaagcgg
      661 ttggccaggc ggaagtggga cacgaaacca gcgagatcgg ctggttcgcg ccggaagaga
      721 tcccctggga agagatcgcg ttcgacagca cggaagccgc gcttcgcagc tgggtcgcgc
      781 ggcgccagcc gtgactcacg agcccaggta gccgttcaat tcggcagttg gcattgcctg
      841 gtccaggtag ccgaacgtcc cttgccctga gacctccttg agcgcggcac tgacggcgcc
      901 catcgcagcc ttgtagagcg aggtcgaaag gctgatgcgg cgcactccgg cgtccgtcaa
      961 ctcgcgtacc gtgaaggagc ggcccgggat cccggccatg aaattcactg gcct
//
LOCUS       DASRPQ010001160         4957 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1715310, whole genome shotgun sequence.
ACCESSION   DASRPQ010001160 DASRPQ010000000
VERSION     DASRPQ010001160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4957
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1715310"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..378)
                     /locus_tag="VFD73_13205"
     CDS             complement(<1..378)
                     /locus_tag="VFD73_13205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HZI74955.1"
                     /translation="MPKTSSLRERRVAQGTETQTFRNFVAGEWSEPANSAYFDNRNPA
                     DRNDLIGRFPDSDERDIDAAVKSAQRGFAIWSRTPAPARGDVLRRVGDLLVNRKEALA
                     NAMTREMGKVLAETRGDVQEGIDT"
     gene            complement(388..837)
                     /locus_tag="VFD73_13210"
     CDS             complement(388..837)
                     /locus_tag="VFD73_13210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74956.1"
                     /translation="MTEQPRNWDKELANIDRAIAKQPAPAPVVPSSVAHPVPRRRLIA
                     LAWFWTVLAIVLGVALVLWPYDKNCGIRLLFFLGAALLAIIMALLGAFASWAHRQGVA
                     MVLSLLVIVWAGVMAAREILPRTGYARESRGWTCPAPAPAPAPTSSQ"
     gene            complement(830..2194)
                     /locus_tag="VFD73_13215"
     CDS             complement(830..2194)
                     /locus_tag="VFD73_13215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HZI74957.1"
                     /translation="MKHRILIVDDEPGIRQALKQVLEYEKLVVRVASSGGEAITLYPD
                     FRPHLVFLDVKMAGLDGLDTLSRIRKLDPKAQVVMISGHGTIATAVEATQLGAFDFLE
                     KPLDTDRLLVTVRNALAHAELVDENTRLKEVSDSRFIMVGSSPALDEVRQLIAKVGPT
                     SARVLITGENGTGKELVARALHESSPRRDRPFVEVNCAAIPSELIESELFGHMKGSFT
                     GAVADRAGKFEQADGGTLFLDEVGDMSLAAQAKLLRVLQEGVVTRIGGSKSIQVDVRV
                     LAATNKDLDEEIEQGRFREDLLYRLNVVPIEVPSLRERQEDIPELVTHFVQQLSAGGG
                     VAAKRFSADAIRKLQGRSWPGNVRELRNAVERALILASGKVVGAADIDQLLPNGGAGS
                     ATKDGQSFAKLQQDSEKKLLLKRLKENDWNISETARVLKITRSNLYKKLKRFEIPLPG
                     SSDD"
     gene            complement(2191..2838)
                     /locus_tag="VFD73_13220"
     CDS             complement(2191..2838)
                     /locus_tag="VFD73_13220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74958.1"
                     /translation="MGCLTAPFRFAGFLGLLLALAVGWLYRDRLTGEAQKLVGSFTGA
                     HASPSGGRPGSRALLSARAKIDSLNGWRADSVVLNASEVASMIGAGLDPSLRSQLDSL
                     QVELQNGSITVKARLATARLPRELIGPLAVALRPTEPIEAAGPLEVVGPRQAEWKLQS
                     FRIRNFPIPRDAVPTLVSRALGDPKRTTVPVKIPAGVREIRLHPGSATLIGVPRA"
     gene            complement(2838..3392)
                     /gene="thpR"
                     /locus_tag="VFD73_13225"
     CDS             complement(2838..3392)
                     /gene="thpR"
                     /locus_tag="VFD73_13225"
                     /inference="COORDINATES: protein motif:HMM:TIGR02258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HZI74959.1"
                     /translation="MRLFVAVPIPDPARGQILRLLGQLREGVWPVRWVHDEGLHMTLK
                     FFGEVAPERLDVIIEALRFAAQGAGPLPLRLGELGAFPNRSRPKVLWVGIEAEPSLEL
                     LQDRIERGCEAIGFPPEGAPFQPHVTLGRVREGQRLPSRGLDDHSEGFEPVPFVAQEL
                     VLYESMLTTQGPRYESRLTLDLRH"
     gene            complement(3392..4240)
                     /gene="larE"
                     /locus_tag="VFD73_13230"
     CDS             complement(3392..4240)
                     /gene="larE"
                     /locus_tag="VFD73_13230"
                     /inference="COORDINATES: protein motif:HMM:TIGR00268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent sacrificial sulfur transferase
                     LarE"
                     /protein_id="HZI74960.1"
                     /translation="MLPLSDFHSYVSSMADLNKLQTLLEDMGSAVLGYSGGIDSAFLA
                     VMGIRALGPGRFLAVMGRSPSYPAVQAENAQLIAQQFNIPLLEIDTYELLDPRYLSNS
                     TERCYFCKSELWTRLGQVARDGGYQVVLDGTNADDLGEHRPGLRAAGEHRVRSPLAES
                     GWSKADVRAGAHELGIPTWDAPAAPCLSSRVVYGLEITSERLRQVEQAEEFLRHLGVT
                     GDLRVRHHGRKARVEVSAAEMDLVRAEWTVIRAALLQLGFAEVELDPEGYRRGGLLAI
                     ASPARD"
     gene            4239..4673
                     /gene="arfB"
                     /locus_tag="VFD73_13235"
     CDS             4239..4673
                     /gene="arfB"
                     /locus_tag="VFD73_13235"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: protein motif:HMM:NF006718.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome rescue aminoacyl-tRNA
                     hydrolase ArfB"
                     /protein_id="HZI74961.1"
                     /translation="MAEGVLEITSDLHLPFSELEYRASRSGGPGGQHVNTSSTRIELW
                     WDVMQSPTLTPEQRELLLTRLAARLDANGRLRLVSSGSRSQLRNRENVTERLRSLVAA
                     ALVPPKKRKRTAPTRAAKAARLEAKRRRAATKQQRRSPIPEE"
     gene            complement(4694..>4957)
                     /locus_tag="VFD73_13240"
     CDS             complement(4694..>4957)
                     /locus_tag="VFD73_13240"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI74962.1"
                     /translation="ISLVLTDVVLPGGNGRELADRIAELRPFTPVLFTSGYTEGDIQR
                     RGLLTGGAAFLQKPVTPELLVEAVEELLNGSRRRVKTDERNAG"
BASE COUNT          935 a         1664 c         1479 g          879 t
ORIGIN      
        1 ggtatcgatc ccctcttgca cgtctccccg ggtctccgcc aaaaccttcc ccatctcgcg
       61 ggtcatggcg ttggcgagcg cctccttgcg gttcactagg agatctccca ctcgacgcag
      121 cacatcaccc cgcgcggggg ccggcgttcg gctccagatg gcaaaacccc gttgcgcgga
      181 tttcaccgcc gcatcgatat cgcgctcgtc tgaatccgga aagcgtccga tcagatcatt
      241 gcgatcggcc gggttccgat tgtcgaagta ggcactgttc gccggctcag accactcacc
      301 agcgacgaaa tttctgaatg tctgggtctc ggtgccctga gcaacccgac gctcccggag
      361 gctcgatgtc tttggcatag gttcagtcta ctgcgatgag gtcggtgctg gagcgggagc
      421 cggagcggga caggtccatc cgcgtgattc ccgcgcgtac ccggtgcgag gcagaatttc
      481 gcgggccgcc atcacgccgg cccagacgat caccagtaaa gaaagtacca tcgcaacgcc
      541 ctggcgatgg gcccagctcg caaaggcgcc gagcaacgcc ataatgattg ccagaagcgc
      601 cgctccgaga aagaagagca gcctgatgcc gcagttctta tcgtacggcc acaggaccag
      661 tgcgacgcca agcacgattg ccagcaccgt ccagaaccag gccagcgcga tcaaccgacg
      721 tcgaggcact ggatgagcga ccgacgaggg aacgaccggg gcaggcgccg gctgtttcgc
      781 gatggcccga tcgatattgg ccagctcttt gtcccagttc ctgggctgct cagtcatccg
      841 aactcccggg tagggggatt tcgaagcgct tgagtttctt gtacaggtta gatcgtgtga
      901 tcttcagcac ccgcgccgtc tccgagatgt tccagtcatt ctccttgagc cgcttcagca
      961 acagtttctt ttccgagtcc tgctgcagtt tcgcgaagct ttggccatcc ttggtggctg
     1021 atcctgcgcc cccattcggt agcaactgat cgatatcggc cgcgcccacg accttgccgg
     1081 aggcaaggat cagcgcccgc tccacagcgt tccgcagctc gcgcacgttg cccggccagc
     1141 tccggccctg gagcttccgg atggcatccg ctgaaaacct cttggcggca acgcctcccc
     1201 cggcagacaa ctgttggacg aagtgggtca ccagctccgg aatgtcctcc tggcgctcgc
     1261 ggagacttgg cacttcgatc gggaccacgt tcaggcggta cagaagatct tcccgaaaac
     1321 ggccctgttc gatctcctcg tccagatcct tgttggtggc ggccagtacc cggacgtcaa
     1381 cctggatcga cttggacccg ccgatccgcg tcaccacacc ttcctgcagg acgcgcagga
     1441 gctttgcctg ggctgccagc gacatgtcgc cgacctcatc cagaaacagg gtccctccgt
     1501 cggcctgctc gaactttccc gcgcgatcgg ccaccgcccc ggtaaacgag cccttcatgt
     1561 gaccgaacaa ttcactctcg atcagttccg acgggatagc tgcacagttc acctccacaa
     1621 aggggcggtc gcgccggggc gatgattcgt gcaacgcccg cgcaaccagc tcctttccgg
     1681 tgccattctc accggtgatc aggacccgag ccgaagtggg gccgaccttg gcgatcagct
     1741 gtcgcacctc gtccaaagcc gggctgctcc ccaccatgat gaaccggcta tcggacactt
     1801 ccttgagacg agtgttctca tcgactaatt cggcatgggc cagcgcgttt cgaacggtca
     1861 ccagcaaccg gtcggtgtcg agtggctttt ccaggaaatc gaaagctccc aactgtgttg
     1921 cttcgaccgc cgttgcaatc gtcccgtgcc ccgagatcat caccacctgt gccttggggt
     1981 cgagctttcg aattcgactc agggtgtcca gcccgtccag gccagccatc ttcacgtcca
     2041 gaaacacgag atggggtcgg aagtccgggt acagcgtgat cgcttcgccg ccggaagacg
     2101 ccaccctgac tacgagcttc tcgtactcga gcacctgctt cagtgcctgc cgaatgcctg
     2161 gttcgtcgtc cacgatgagg atccggtgtt tcatgcccgg ggcactccga tcagcgtggc
     2221 actaccggga tgaagtcgga tctcacgcac tcccgccgga attttcaccg gtacggttgt
     2281 cctcttggga tcgcccaacg ctctcgagac cagcgtgggg accgcatcac gaggaatggg
     2341 aaagttgcga attcgaaaac tttgcaactt ccattcggcc tgccgcggac caacaacctc
     2401 gagcggtccg gccgcttcga tgggctcggt cgggcgcagc gccaccgcca atgggcctat
     2461 cagctctcgc ggcagtcgag cggtggccaa gcgcgccttc acggttatcg agccattctg
     2521 tagttcgacc tgaagcgaat cgagctggct gcgaaggctg gggtccagcc cggccccgat
     2581 catcgaggcg acttccgacg cattcagcac cacggagtcg gctcgccagc cgttcaggga
     2641 gtcgatcttg gcacgcgccg acagcagcgc ccgcgagccg ggccgtccac cgctcgggct
     2701 ggcgtgagcg ccggtaaaag agcccactag tttttgagct tcgccggtga gtcggtcacg
     2761 atacagccag cccactgcca acgcgagcag cagccccagg aacccggcga acctgaacgg
     2821 ggcggtcaga cagcccatca gtgcctcaga tcgagcgtga ggcgcgattc gtagcgcgga
     2881 ccctgggtgg tgagcatgct ctcgtacagc accagctcct gtgccacgaa gggcaccggc
     2941 tcgaagccct ccgaatgatc atccagccct cgcgacggca gccgctggcc ttcgcgcacc
     3001 cggcccaggg tgacgtgcgg ctggaatggc gcaccctccg gcgggaagcc gatggcctcg
     3061 cacccacgct cgatgcgatc ctgcagcagc tccagcgaag gctccgcctc gatccccacc
     3121 cacagcacct tgggacgaga ccggttagga aacgcaccga gctcccccaa gcggagcggg
     3181 agcggccccg ccccctgtgc ggcgaatcgg agtgcctcga tgatgacgtc caggcgctcg
     3241 ggtgcaacct cgccgaaaaa cttgagcgtc atgtggagac cctcatcgtg cacccagcga
     3301 accggccaca cgccttcgcg cagttggccc aatagtctca agatctgccc ccgagcaggg
     3361 tccgggatcg gaacggcgac aaagagtcgc atcagtcgcg tgcaggagac gcaatcgcga
     3421 gtaacccacc gcgccggtac ccttcggggt ccagctcgac ttcggcaaag cccagctgga
     3481 gcagggcggc gcgaattacc gtccactccg ccctgacaag atccatctcc gccgcactca
     3541 cctccacccg ggcttttcgg ccatggtgcc ggacccggag gtcaccggtg actcctaggt
     3601 gccgcagaaa ctcttctgcc tgctccactt gccgcagtcg ttctgaagtg atctcgaggc
     3661 catagacgac tcggctggac aagcacggag ctgccggggc atcccaggtc gggatcccca
     3721 gctcgtgtgc cccagcacgg acgtcggcct tgctccaccc tgattccgcc aaaggtgagc
     3781 ggacccggtg ttctcctgca gcgcgaagac cgggccggtg ctcgcccagg tcgtcggcgt
     3841 tggtcccatc gagcacaacc tgatacccgc catccctggc tacctgaccc aaacgagtcc
     3901 acagctccga cttgcagaag taacaacgct ccgtcgaatt gctgaggtat cgcggatcca
     3961 gcagctcgta ggtgtcgatc tcgagcaacg gaatgttgaa ctgctgagca atcagttgcg
     4021 cattctcagc ctggactgca gggtaggacg gacttcgccc catcaccgcg aggaagcgtc
     4081 ccggtccaag ggctctgatt cccatgacgg cgaggaaggc agagtcgata cctccggagt
     4141 atccgagcac cgcgctgccc atgtcctcga ggagcgtctg cagcttgttc aagtcggcca
     4201 tgctggaaac gtaactgtga aaatcggaga gcggtaacat ggcagagggt gtgctcgaga
     4261 tcacgtcgga tctgcatctt cccttttcgg agctcgagta ccgcgcctcg cgctccggcg
     4321 gacccggagg acagcacgtg aacacatcgt cgactcggat cgaactctgg tgggacgtga
     4381 tgcagtcgcc cactctcacg cccgaacagc gagaactgtt actcacccgg ctggcggcac
     4441 ggctggacgc taacggccgg ctacggctcg tctcgagcgg ctcgcgaagt cagctgcgta
     4501 atcgggagaa tgtcaccgag cggctgcgga gcctggtggc cgcggcgctg gtgcctccca
     4561 agaaacgcaa acggactgcg ccgactcgag cggcgaaggc agcgcggctg gaggcgaagc
     4621 gccgaagggc agcgaccaag cagcagcggc gcagccccat cccggaggag taacccgccg
     4681 gcaactccga gcgctaccct gcattccgtt cgtccgtctt cacccgccgg cgagaaccat
     4741 ttagcagctc ctccaccgcc tccaccagga gctcgggcgt cactggcttc tggaggaacg
     4801 ccgctcctcc cgtaagcagt cctcggcgct ggatatctcc ttcggtgtag ccggaggtga
     4861 agagcacggg tgtgaagggc cgaagctccg ctatgcggtc ggccagctcg cgtccgttgc
     4921 cgccagggag gacgacatca gtgagcacca gactgat
//
LOCUS       DASRPQ010001161         1231 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1396433, whole genome shotgun sequence.
ACCESSION   DASRPQ010001161 DASRPQ010000000
VERSION     DASRPQ010001161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1396433"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..644)
                     /locus_tag="VFD73_13245"
     CDS             complement(<1..644)
                     /locus_tag="VFD73_13245"
                     /inference="COORDINATES: protein motif:HMM:NF012352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74963.1"
                     /translation="MAEYQNIFTQVQVRGPAYAGVPLTRGPWVRSWKPQFVHLLGRIG
                     DAQLGPVYLGWTGLASILCGFIAFEIIGLNMWASVNWDPVQFLRQLPWLALEPPAPVY
                     GLSLPPLAEGGWWIMTGFFLTTSILLWWLRTYRRARALGIGTHVSWAFAAAIWLYLVL
                     GLIRPVLMGSWGEAVPFGIFPHLDWTAAFSIRYGNLFYNPFHMLSIAFLYGSALL"
     gene            complement(655..>1231)
                     /gene="pufL"
                     /locus_tag="VFD73_13250"
     CDS             complement(655..>1231)
                     /gene="pufL"
                     /locus_tag="VFD73_13250"
                     /inference="COORDINATES: protein motif:HMM:TIGR01157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009521 - photosystem [Evidence IEA];
                     GO_function: GO:0005488 - binding [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="photosynthetic reaction center subunit L"
                     /protein_id="HZI74964.1"
                     /translation="GLWQIITICAIGAFVSWAFRQAEIARKLGMGLHVPVAFGFAIFA
                     YISLVVIRPVLLGGWGHAFPYGILSHLDWVSNVGYQYLHFHYNPAHMLAVSFFFTTTF
                     ALSLHGSLVLAAANPPAYEKVVKTAEHENTFFRDTIGWSIGTLGIHRLGLFLALNAGF
                     WSAVCIIISGPFWTRGWPEWWNWWLDLPIWR"
BASE COUNT          267 a          380 c          411 g          173 t
ORIGIN      
        1 agcagcgccg agccatagag gaaggcgatc gagagcatgt ggaacgggtt gtagaacagg
       61 ttgccgtagc ggatggaaaa cgccgctgtc cagtccaggt gggggaagat cccgaagggc
      121 accgcctctc cccagcttcc catcaggacg gggcggatca gccctaggac aaggtatagc
      181 cagatcgccg cggcgaaggc ccaggagaca tgggtgccga tgcccagcgc ccgcgccctt
      241 cggtatgtcc gcagccacca cagcaggatt gacgtggtca ggaagaaacc cgtcatgatc
      301 caccagccgc cctccgcgag cggcgggagg cttaggccgt agacgggagc cggcggctcc
      361 agcgccagcc agggcaattg ccggaggaac tgcaccgggt cccagttgac cgacgcccac
      421 atgttcagcc cgatgatctc gaaggcgatg aagccgcaga ggatcgaggc gagaccggtc
      481 caacccagat agaccggtcc caactgcgcg tcgccgatcc ggccgagcag atggacgaat
      541 tggggtttcc acgaccggac ccagggtccg cgggtcagcg gcacgccggc ataggccggg
      601 ccgcgtacct gcacttgagt gaagatgttc tgatattccg ccatagccgc ctcctcagcg
      661 ccagatcggc aaatcgagcc accagttcca ccattccggc cagccacggg tccagaaggg
      721 gccgctgatg atgatgcaca ccgcactcca gaacccggcg ttcagcgcca ggaaaaggcc
      781 cagccggtgg atgccgagcg tgccgatcga ccagccgatg gtgtcgcgga agaaggtgtt
      841 ctcgtgctcc gccgtcttga ccactttttc gtatgccggc gggttggcgg cggccagcac
      901 cagcgaaccg tggagggaga gcgcgaaggt ggtcgtgaag aagaagctca cggccagcat
      961 atgcgccggg ttgtaatgga aatgcaggta ctggtagccg acgttcgaca cccagtccag
     1021 atggctgagg atgccgtagg ggaaggcatg tccccagccg cccagcagta ccggacggat
     1081 cacgaccagc gagatatagg cgaagatcgc gaagccgaag gcgacgggca catgcaggcc
     1141 catgcccagc ttgcgggcga tctcagcctg ccggaaggcc caggacacga aggcgccgat
     1201 cgcacagatc gttatgatct gccagaggcc t
//
LOCUS       DASRPQ010001162         2434 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2032613, whole genome shotgun sequence.
ACCESSION   DASRPQ010001162 DASRPQ010000000
VERSION     DASRPQ010001162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2434
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2032613"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1325
                     /gene="rny"
                     /locus_tag="VFD73_13255"
     CDS             <1..1325
                     /gene="rny"
                     /locus_tag="VFD73_13255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HZI74965.1"
                     /translation="REEWERLERRADERARLQERKLEEIDSRERNAAHREETLTQRET
                     ALRAREGEADRLAQEQRVKLERIAGLTAEDAKREIMQRVEDEARGQAAALVRDIKDQA
                     RRTADRDARRIISIAIQRLGAEHTAESTVAAVALPSDEMKGRIIGREGRNIRAFETAT
                     GVDVIIDDTPDTVIISCFDPIRREVARRALEALITDGRIHPGRIEEIVLKVQRELETQ
                     LVELGEQAAYDTGVHGLHPEMIKLIGRMRYRTSYGQNILDHSKEVAWLAGMMAAELHL
                     DVALAKRGGLLHDIGKVLTHDTEGTHVELGVEVARKYGENPLVINCIQAHHDDVPHES
                     AESVLVQAADAISGSRPGARREAFESYVKRLTRLEEIANGFEGVEKSSVIQAGREIRV
                     VVTPDRIDDGAAAQLSETIARKIESELQYPGQIKVVVIRETRAVDFAR"
     gene            1322..2209
                     /gene="folD"
                     /locus_tag="VFD73_13260"
     CDS             1322..2209
                     /gene="folD"
                     /locus_tag="VFD73_13260"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HZI74966.1"
                     /translation="MSAQVLDGTAIGKAIRAEVAEEVARLAATGRKPGLAAVLVGEDP
                     ASAVYVRSKGKACEEAGMHSVTIRLPASTTEAELLETVDRLNADLQIHGILVQLPLPK
                     HINSEKVLRRIDPAKDVDGFHPVNVGKLVIGDRTAFRPATPYGVQQMLIRSGIETRGA
                     HAVIVGRSNIVGRPMANLLIQQGPGGDATVTVCHSRTRDLPAVTRSADILIAAIGKAE
                     FVTADMVRPGAVVIDVGINRVDDASRPRGYRLVGDVAYEPVSRIASAITPVPGGVGPM
                     TIAMLLQNTLQAMQQAALD"
     gene            2221..>2434
                     /locus_tag="VFD73_13265"
     CDS             2221..>2434
                     /locus_tag="VFD73_13265"
                     /inference="COORDINATES: protein motif:HMM:NF025118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HZI74967.1"
                     /translation="MTLSLPLNIPTTTDDVWTVAQLSASVKRLLDGHPAPLWVRGEVV
                     QCKVWSSGHWYFTLRDKKSQVRCCLFG"
BASE COUNT          493 a          725 c          826 g          390 t
ORIGIN      
        1 gtcgggaaga gtgggagcgg ttggaacgcc gggccgacga gcgggcccgg ctccaggagc
       61 gaaagctcga agagatcgac agccgggagc gaaacgcggc gcaccgggaa gagaccctca
      121 cccaacgtga gacggcgctc cgggcccgcg agggagaggc cgaccgcctg gcgcaagagc
      181 agcgggtcaa actggagcgg atcgccggcc ttactgccga agacgccaag cgcgagatca
      241 tgcaacgggt cgaggacgag gctcgaggtc aggcggccgc gctggttcgc gatatcaagg
      301 atcaggctcg gcgaactgcc gatcgcgatg cgcggcggat catctcgata gccattcagc
      361 ggctcggcgc ggaacacacc gcggaaagca ccgtcgctgc cgtggcgtta cccagtgatg
      421 agatgaaggg ccggatcatc ggccgggaag gccgaaacat tcgggcattc gagaccgcca
      481 ccggcgtcga cgtcatcatc gacgacacgc ccgacacggt gatcatctcc tgcttcgatc
      541 ccattcgccg tgaggtcgcc cggcgggcgc tcgaagccct catcaccgat ggcagaattc
      601 acccgggaag aatcgaagag atcgtgctca aggtgcagcg cgagctggaa acccagctgg
      661 tcgagctggg tgaacaggcc gcctacgaca ctggagtaca cggactccat cccgaaatga
      721 tcaagctcat cggccggatg cggtatcgga cttcctacgg ccagaacatt ctggatcact
      781 cgaaggaagt cgcctggctg gccggaatga tggctgcaga gcttcacctg gatgtggcct
      841 tggccaagcg gggcggactg ctgcacgata tcggcaaagt actgactcac gacaccgagg
      901 gaactcacgt cgagctgggc gtcgaggtag cgcggaagta cggcgagaat cccctggtga
      961 tcaactgcat ccaggcgcat cacgatgacg tcccccatga atccgccgaa tcggtgctgg
     1021 tgcaggcggc ggatgccatc agtggctctc ggccgggagc tcggcgggag gcgttcgaga
     1081 gctacgtcaa acggctgacc cggttggagg agatcgccaa cggattcgag ggagtcgaaa
     1141 agagcagcgt gatccaggcc ggccgggaaa tccgggtggt cgtgacgccc gatcggatcg
     1201 atgacggggc ggcggcgcag ctctcggaga ccatcgcccg gaaaatcgag agtgagttac
     1261 agtacccggg acagatcaag gtggtggtaa tccgagaaac ccgagccgtg gattttgctc
     1321 gatgagtgcc caagtgctcg atggaaccgc gatcggtaag gccattcggg ccgaagtcgc
     1381 cgaggaggtt gcccgactcg cagcgaccgg ccgaaagccg ggcctcgctg ctgttctggt
     1441 gggggaagat cccgcaagcg ccgtctacgt tcgttccaaa ggcaaggcat gcgaagaggc
     1501 cgggatgcac tcggtgacga tccgcctgcc ggccagcacc acggaagcgg agctgctcga
     1561 aaccgtggac cggctcaatg ccgatctgca gatccacggc atcctggtgc aacttccgct
     1621 tcccaagcac atcaactcgg agaaggtgct ccggaggatc gatccggcca aggacgtgga
     1681 cggcttccat ccggtgaacg tgggaaagct ggtgatcggc gatcggaccg ccttccggcc
     1741 cgcgacgccc tacggggttc agcagatgct gatccgctcc gggatcgaga cccggggcgc
     1801 tcatgcagtc atcgtgggcc ggtcgaacat cgtggggcgg ccaatggcca atctcctgat
     1861 ccagcagggc ccgggcgggg atgcgacggt aacggtgtgc cactcgcgga cccgggacct
     1921 gccagcggtc acccggagcg ccgacatcct catcgcggcg attggaaagg cggagttcgt
     1981 tacggccgac atggtgcgtc ccggcgccgt ggtgatcgac gtgggaatca atcgggtaga
     2041 cgatgcttcc cggccgcgcg gctaccgcct ggtcggcgat gtggcctatg agccggtttc
     2101 ccgaattgcc tcggcgatca cgccggtacc tggtggcgta ggaccgatga cgatcgccat
     2161 gctgctgcag aatacactac aggcaatgca gcaggcggca ctcgattagt cttccttctt
     2221 atgactctgt ccctcccgct gaacatccca accaccaccg atgacgtctg gaccgttgcc
     2281 cagctgagcg cgtcggtcaa acggctgctg gacggtcacc cggcacccct ctgggtccga
     2341 ggtgaggtgg tacagtgcaa ggtctggtcg agtgggcact ggtacttcac tctgcgagat
     2401 aagaagagtc aggttcgctg ctgtttgttt ggaa
//
LOCUS       DASRPQ010001163         1113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1396805, whole genome shotgun sequence.
ACCESSION   DASRPQ010001163 DASRPQ010000000
VERSION     DASRPQ010001163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1396805"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..447)
                     /locus_tag="VFD73_13270"
     CDS             complement(94..447)
                     /locus_tag="VFD73_13270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74968.1"
                     /translation="MRGAQRLLWSGLAIITLVSASTSPAHAQGNMKNKHYAVTSSRAV
                     SVTRAVLIGRGYNVVRIERAGPTQVVYYRAGNMGRGRGKGPLRRMVIRQVRDRVIFEE
                     AEPSVLVDIDLKLQM"
     gene            complement(612..>1113)
                     /locus_tag="VFD73_13275"
     CDS             complement(612..>1113)
                     /locus_tag="VFD73_13275"
                     /inference="COORDINATES: protein motif:HMM:NF016557.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74969.1"
                     /translation="RFTPHRSSGSAAMLEEACAKGAEGIIAKRADSRYVSTRSTDWLK
                     LKCVRQQEFVIGGYTAPQGARERLGALLVGYYEGKSLRYAGKVGTGYDRRTLEYLYER
                     LVPLHRSSTPFVGGLSPAGDIQWVTPKLVAQVGFSEWTSAGLLRHPRFLGLRDDKSPR
                     EVRREE"
BASE COUNT          217 a          352 c          343 g          201 t
ORIGIN      
        1 atgagcagta ccccaccaag cgacagaacg cgagctagcc acgagctgcc acgcattgga
       61 cctccggttg aaaaccaggg gaagggtgtc acgctacatc tggagcttga gatcgatgtc
      121 caccaggacc gatggctcgg cctcctcgaa gatcacgcgg tcgcgcacct gccggatcac
      181 catccggcgg agcggaccct tgcctcggcc acggcccatg ttgcccgctc gataatagac
      241 tacctgagtg ggaccagccc gctcgattct cacgacgttg tacccgcggc cgatcaggac
      301 tgcgcgagtg acactcacgg ctcggctact ggttacggcg tagtgcttgt tcttcatatt
      361 gccctgtgcg tgtgccgggc tggttgaggc cgacaccagg gttatgatcg caaggcctga
      421 ccagagcaac cgctgggctc cgcgcataga gctgactccg catatggttg taggggggac
      481 ggacccggag ggcaagaatt gtgcaccgcg aacccatgat ctaccgggtt gtgcggcttt
      541 agcttagtcg tggagagctg gggaattgag cgtcggaaag tgacgtgctt gaggcgggtt
      601 gcgaggatcg actactcctc ccgccggacc tcccgaggtg acttatcatc gcgcagcccg
      661 agaaaccgtg gatgacgcag cagccccgcg gaagtccact cggaaaaccc gacctgggct
      721 accagcttcg gagtaaccca ctggatgtca cccgccggac tgagaccacc gacgaaggga
      781 gtcgaggagc ggtgcagggg aaccagccgc tcgtataagt attccagcgt gcgacgatcg
      841 tatccggtcc ctaccttgcc ggcataccgc agtgacttgc cctcgtaata gccgaccaga
      901 agggcgccaa gccgctctcg ggcaccttgc ggcgccgtat acccgccgat cacgaactcc
      961 tgctggcgca cgcatttcaa cttcagccaa tcggtcgatc gggtgctcac gtagcgcgag
     1021 tcagctcgct tcgcgatgat cccttcggcc cccttggcgc aggcctcttc cagcatggca
     1081 gctgagccgc tgctccggtg cggggtaaac cgg
//
LOCUS       DASRPQ010001164         1243 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2666985, whole genome shotgun sequence.
ACCESSION   DASRPQ010001164 DASRPQ010000000
VERSION     DASRPQ010001164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1243
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2666985"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1139
                     /locus_tag="VFD73_13280"
     CDS             <1..1139
                     /locus_tag="VFD73_13280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74970.1"
                     /translation="MVIDAQLPVPAPVAGHDEMHWARIRVALRDSEDIGRLTRFLGAV
                     YKEMKEQENAGHLFAVQAVPAVPPRLISTPGSAEAQWDGEESEAPILTSDLDVVNSGV
                     AGSEMADAQTWHVLAICADARGNIESEILQQLASVRSRFQLVGLTYALLHGTSVIFLL
                     VHEPQADDPPGTPVDQVPEPEEDRAAALEADLCAIPTLSKVQVLLHERLSRDQLGRVA
                     HYPLLRIRFRWQDQPQAFLNLLDSLNKVLKEELKSIEQLGWSVSYARLQVPTGQVARG
                     SLAVRLHIPAEAIGSWAPSRMEEIGRRIETAAALAAEKEQVTIFSASDSPRPDDPVIN
                     IDQIKKRLRREGILATVDSDRSAGSGNSDPPGSGSGPRAPHQAS"
BASE COUNT          251 a          382 c          400 g          210 t
ORIGIN      
        1 tgatggtgat cgacgctcag ctgccggtcc cggcgccggt ggcgggacac gatgagatgc
       61 actgggcccg catcagagta gccctgcggg acagcgagga catcggtcgg ctcaccagat
      121 tcctcggcgc cgtctacaag gagatgaaag agcaggaaaa tgccggacac ctgtttgccg
      181 tgcaggctgt cccggctgtc ccgccgcgcc tcatctcgac gcctgggtca gcggaagctc
      241 aatgggatgg cgaagagagc gaagcgccga tacttaccag tgacctggac gtggtgaaca
      301 gcggggtcgc cggcagtgag atggctgacg cccagacctg gcacgtactg gccatatgcg
      361 ctgatgccag gggcaatatc gagagcgaga tcctgcagca gctggcttcg gtacggtcgc
      421 gcttccagct cgtgggactg acctacgcgc tgctgcacgg gacatcggtg atcttcctgc
      481 tcgtccatga accgcaggca gacgaccccc cggggacgcc agtcgaccag gtaccggagc
      541 cagaagaaga ccgagccgcc gccctcgagg ccgatctctg cgcgataccg acattgtcca
      601 aggtacaagt cctgctgcac gagaggctga gcagggacca gctcggacga gtcgcccact
      661 accccctgct gcgaatccgt ttccgctggc aggatcagcc gcaggcgttc ttgaacctac
      721 ttgactcgct caacaaggtc ctcaaagagg aactgaaatc gatcgagcag ctcggctgga
      781 gcgtctccta tgcccggctc caggttccga ccggccaggt agcacgcggg tcgctggcgg
      841 tccggctgca catcccggcc gaggcgatag gctcctgggc cccgtccaga atggaggaaa
      901 tcggaaggag aattgaaaca gccgcagcct tggccgccga gaaggaacaa gttactattt
      961 tctcggccag tgattcccct agaccggatg atccggtgat aaacattgat cagatcaaga
     1021 aaaggttgcg ccgagaaggc atcctggcca cggtggatag cgatcgcagc gctgggtcgg
     1081 gcaactctga cccaccgggt tcagggtccg gcccccgggc gccccaccag gcaagttgat
     1141 cgtgtcagcc catcacgttg cccgcgctct ccgcgtgggg ctcgcgaagg cgcgagtagt
     1201 gcccgaggtt tatctcgttc ttggtaaagg gtgcgctgaa ccg
//
LOCUS       DASRPQ010001165         1128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2667081, whole genome shotgun sequence.
ACCESSION   DASRPQ010001165 DASRPQ010000000
VERSION     DASRPQ010001165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2667081"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(99..275)
                     /locus_tag="VFD73_13285"
     CDS             complement(99..275)
                     /locus_tag="VFD73_13285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74971.1"
                     /translation="MEYVAVILPSLVVGLLFWFAMKAIFNADKAERQAEARAQAEADS
                     LAVRPTDRQGPESK"
     gene            complement(278..>1128)
                     /locus_tag="VFD73_13290"
     CDS             complement(278..>1128)
                     /locus_tag="VFD73_13290"
                     /inference="COORDINATES: protein motif:HMM:NF012379.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HZI74972.1"
                     /translation="FETHMNAFDQKMTLRIATELYLKRAVVGGIDRVYDMGRVFRNEG
                     VDSTHSPEFTTLECYEAWADQFVMAQRIKEIILDAADAVGAGRVLQTEAGEINLDGEW
                     TWLAVYPGLSDAVGQEITPDTSAEVLRELAAKHDVKVDPKWDAEKLAVELFGEIVEPT
                     LLNPTFVYDYPPSAQPLARPHREDGRLIEAWDLIIGGMERGTAFSELIDPVIQRERLT
                     EQSLHAAAGDVEAMQLDEDFLRALEYGAPPMGGIGLGIDRLVMLFTGAGIRETILFPL
                     LKPEGH"
BASE COUNT          199 a          331 c          382 g          216 t
ORIGIN      
        1 caggatgttt cccgaaaaaa gtatgactct tatcttggca acgcgtcaaa gcgcctaatg
       61 gttccttggg gataaaggca gaaagtaggg ggttttagct attttgattc gggaccttgg
      121 cggtccgtgg gccgcacggc aagcgaatca gcttcggcct gggcgcgcgc ttccgcctgc
      181 cgttcagcct tgtccgcatt aaagatcgcc ttcatggcaa accagaacag caggcccacc
      241 accagggagg gaagaatgac tgctacgtat tccatggtca gtgcccttcg ggcttcagca
      301 gggggaacag gatggtttcg cggatgccgg ctccggtgaa gagcatcacc agccggtcga
      361 tgcccaggcc gatgccgccc atgggaggag cgccgtattc gagggcgcgc aggaagtcct
      421 cgtcaagctg catggcctcg acgtcgccgg cagcggcgtg cagggactgc tcggtgagcc
      481 gttcgcgctg gatgacgggg tcgatcagtt cggagaaggc ggtgccgcgc tccatgccgc
      541 cgatgatgag gtcccaggct tcgatgaggc ggccgtcctc gcggtgcggg cgggccagcg
      601 gctgcgcgga gggcgggtag tcgtagacga aggtggggtt cagcagggtg ggctccacga
      661 tttcaccgaa gagctccact gccagcttct cggcgtccca cttgggatcc accttgacgt
      721 catgcttggc tgcaagctcc ctaagcacct cagcggaggt gtccggggtg atttcctgcc
      781 caacggcgtc ggaaagtccg gggtagacgg ccagccaggt ccactcgccg tcgaggttga
      841 tctcccccgc ctcggtctgc aggacgcgtc cggcacccac ggcgtcggcg gcgtcaagga
      901 tgatctcctt gatccgctgc gccatgacga actggtcggc ccaggcctcg tagcactcga
      961 gagtggtgaa ttccgggctg tgggtggagt caacaccctc gttgcggaac acgcggccca
     1021 tgtcgtaaac gcggtcgatg ccgcccacta ctgcacgctt gaggtacagc tcggtggcga
     1081 tgcgcagggt catcttctgg tcgaaggcgt tcatgtgggt ctcgaacg
//
LOCUS       DASRPQ010001166         2736 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2330300, whole genome shotgun sequence.
ACCESSION   DASRPQ010001166 DASRPQ010000000
VERSION     DASRPQ010001166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2736
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2330300"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..776)
                     /locus_tag="VFD73_13295"
     CDS             complement(<1..776)
                     /locus_tag="VFD73_13295"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HZI74973.1"
                     /translation="MKVWSILAWISGALAVARPMAAQDEAVIEQLAPVLAAEDARDWR
                     QPLFEKALVAPDSLVRRIVALAAGRIGDLRATPLLLRLLDQPDSTVKLAAAFALGLLR
                     DSAAVEPLIQRLTGLPALDTATADEAVTALGKIGGKRAADFFASVLQGEVNLSQADPE
                     PARTQMLLETWRFGRDARAEALLPYADDTLQIVRWRTLYSLGRLRAPVASSQLLAGLR
                     ADDADSRTAAARALTRAYADSAKLATGSVARVLVRAVDDD"
     gene            complement(773..1252)
                     /locus_tag="VFD73_13300"
     CDS             complement(773..1252)
                     /locus_tag="VFD73_13300"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HZI74974.1"
                     /translation="MREDGALNVYTGDDAFQASAVSETLVRVNYSETDQMGVVYHARY
                     LVWLDIARCDYLRQCGMTYRELEAAGLRLAVSDVSIKYRQPARYDDLIRVRCWVREVA
                     SRRVEFGYLVEHETDRRILATATTSLLALDTTMSLTRLPDSIRSGLRPIADLVKLGT"
     gene            1276..2082
                     /locus_tag="VFD73_13305"
     CDS             1276..2082
                     /locus_tag="VFD73_13305"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008758 - UDP-2,3-diacylglucosamine
                     hydrolase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HZI74975.1"
                     /translation="MLAGGFGRLWTGGRETSIFGAVLGQSLVILSDAHLGVAPPQAEQ
                     GLLEFLEVVPTLGDCLLINGDLFDFWFSYSRVIPRRGFHVAAALARLRRRVPIVMVGG
                     NHDRWGRNFWEEDLGVEFNAHHATFHIGNRAVSAIHGDGLAEPRWQAKLIHRAIQHPA
                     TAAIYRVLHPDLGLRLVDMLSPVLGDHTVDEAKLARAAERQRVWAERHLREHAGIGLL
                     VMGHTHRAVLEEPAAGRQYLNPGAWFDGFRYATATESGAELCRFVPRNAN"
     gene            complement(2079..>2736)
                     /gene="murI"
                     /locus_tag="VFD73_13310"
     CDS             complement(2079..>2736)
                     /gene="murI"
                     /locus_tag="VFD73_13310"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HZI74976.1"
                     /translation="TVTRYSLEILNWLLGQGVKSVVVACNTSTAHALRTLQQATDVPV
                     LGVIKPGARAAIAAGASGPIGVIGTAGTIASDAYRRAINALAPGVSVLQRACPLFVPL
                     VEEGWFEHPATALVATEYLQELRQGCVRSLVLGCTHYPLLKPLLQKVMGPEVRLIDSG
                     QATASALEAILREKKLEAPAGVDVRHRFVVSDDEARFQQVGSRFIGEKLGRAEVVPLG
                     "
BASE COUNT          493 a          887 c          858 g          498 t
ORIGIN      
        1 tcgtcgtcgt caacggctcg gaccagcacg cgcgctacgc tgccggtggc gagtttggca
       61 gaatcggcat acgccctggt cagcgcacga gcggcggccg tgcgcgaatc ggcatcatct
      121 gctcgcagcc cggccagcag ctgactggaa gccaccggtg ctcgcaaccg tccgagggaa
      181 tacagtgtgc gccaacggac gatctgcagc gtatcatccg cataggggag caatgcctcg
      241 gctcgcgcgt cccgcccaaa gcgccaagtc tccagcagca tttgggttcg ggcaggctcc
      301 ggatctgcct gcgagaggtt gacctcgccc tgaagaaccg atgcgaagaa atccgccgct
      361 cgctttccac cgatcttgcc cagcgcggtg actgcctcgt ccgcggttgc ggtatcgagg
      421 gcgggcagtc cggtgagacg ttgaatcaac ggttccacgg cagccgaatc gcgcaggagt
      481 cccagcgcaa atgccgcagc cagcttgacg gttgagtccg gctgatccag cagtcgcagg
      541 agcagtggcg tggctcgaag gtcgccgatg cggccggccg ccagcgcgac aattcgtcga
      601 acaagcgagt ccggagcaac caacgccttc tcgaacaggg gttgtcgcca atcgcgggca
      661 tcttccgccg ccagcaccgg cgcgagttgc tcgatgacag cctcatcctg ggccgccatc
      721 ggccgggcca ccgcgagcgc gccgctgatc cacgccagaa tcgaccagac tttcatgtgc
      781 ccagtttgac cagatcggca atgggacgca gccctgagcg gatcgaatcg gggagtcgcg
      841 tcagcgacat cgtcgtgtcc agggcgagga gactggtcgt cgccgttgcg agtatacggc
      901 gatcggtctc gtgctccacg aggtatccga actccactct tcgggaggct acctcacgaa
      961 cccaacaccg cacccggatg agatcatcgt accgggcagg ctggcgatac ttgatggaaa
     1021 cgtcactcac cgccagccgg agccccgccg cttccagttc gcgataggtc attccacact
     1081 gccgcaggta atcacagcgg gcgatatcga gccagaccag atagcgcgcg tggtaaacca
     1141 cgcccatctg gtcggtttcc gagtagttga ctcggaccag cgtctccgag acggcagaag
     1201 cttgaaaggc atcgtcaccg gtgtagacgt ttagagcgcc gtcctctcgc acgttctcga
     1261 tggtcggggc atcccttgct tgccggcggc ttcggccggc tctggaccgg tggccgggag
     1321 acctccatct ttggcgccgt gctgggtcag agtcttgtca tcctctcgga cgcccacctc
     1381 ggcgtagcac cacctcaggc agaacagggt ctcctcgaat ttctggaggt ggtacccacc
     1441 ctgggtgact gcctgctcat caatggagac ctgttcgact tctggttctc ctacagtcgg
     1501 gtgattcctc ggcgtggctt tcacgtcgcg gcagcgctgg cccggcttcg ccgccgagtg
     1561 cccattgtaa tggtaggcgg aaaccatgac cgctggggcc ggaatttttg ggaagaagat
     1621 ctgggtgtcg agttcaacgc tcatcacgcc accttccaca tcggcaatcg cgcggtctcg
     1681 gcaatccatg gtgacggttt ggcggagccg cgttggcaag cgaagctgat ccatcgcgcc
     1741 atccaacatc ccgcgactgc ggcgatctat cgtgttttgc atcccgatct gggcctgcgg
     1801 ctggtcgata tgctgagtcc ggtgctgggc gaccacacgg tggacgaggc aaaactggcg
     1861 cgagccgcgg agcggcagcg ggtatgggcc gagcggcacc tgcgggagca tgccggcatc
     1921 ggtctgctgg tcatggggca tacccatcgc gcggtgctgg aggagccggc ggcgggaaga
     1981 cagtacctca atccgggcgc ctggttcgac ggctttcgct acgcgacggc cacagaatcg
     2041 ggggcagaac tctgtcgctt cgtgcccaga aacgcgaatt agcctagcgg gaccacttct
     2101 gctcttccca gcttctctcc gatgaaccgc gagcccacct gctgaaatct cgcctcatcg
     2161 tcgctcacga cgaaccgatg tcggacgtcg acgccggcgg gagcctccag cttcttctcc
     2221 cgcagaatcg cttccagcgc ggacgccgtc gcctggccgc tatcgatcaa cctgacctcc
     2281 ggccccatga ctttctgcag cagcggcttc agcagtgggt aatgggtgca gcccagcacc
     2341 agcgagcgga cgcatccttg acgaagctcc tggagatact cggtggcgac cagtgctgtt
     2401 gctggatgtt cgaaccaccc ttcttctacc aacggaacga acagtgggca ggcgcgctgg
     2461 aggacggaga cgcccggagc cagcgcattg atcgcacgac ggtaggcatc gctcgcaatc
     2521 gttcccgcgg ttccgatcac gccgattggt ccggaagccc cggccgcgat tgccgctctc
     2581 gcgcccggct tgatgacgcc gagaacgggg acatcggtcg cttgctgcag cgttcgcagc
     2641 gcatgcgcgg tgctggtatt gcaggcaact accacggact tgacaccctg acccaacagc
     2701 cagttcagga tctccaggct gtatcgggtg accgtc
//
LOCUS       DASRPQ010001167         1987 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2033383, whole genome shotgun sequence.
ACCESSION   DASRPQ010001167 DASRPQ010000000
VERSION     DASRPQ010001167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1987
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2033383"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..760)
                     /locus_tag="VFD73_13315"
     CDS             complement(<1..760)
                     /locus_tag="VFD73_13315"
                     /inference="COORDINATES: protein motif:HMM:NF026760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta-hydrolase N-terminal
                     domain-containing protein"
                     /protein_id="HZI74977.1"
                     /translation="MEEDAKAQGLKEQAVDTPGTPVGSLPGEPSDVAGQRTAEPAGAG
                     QPPAGPQAADEAEGPQPSSEPGKRKKLLYVTLPGCWGALIAGCLSFTPSLLPRTGIIQ
                     GIVWGITAAIGYGVGVLAAQIWRSFPDRAPRRPRRRSWLIFFISAAVLTVVFFGLGQY
                     WQYLIRGLMGVTEYNIALVVASPFVAALVFCLILLIGRGLRGLYHWIAHLLHRWMGQR
                     AARAIGWGLVAGLTYVVITGLLFDGFVNAMNSAYS"
     gene            1105..1545
                     /locus_tag="VFD73_13320"
     CDS             1105..1545
                     /locus_tag="VFD73_13320"
                     /inference="COORDINATES: protein motif:HMM:NF022589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAP family protein"
                     /protein_id="HZI74978.1"
                     /translation="MASRAVKIAIGVVLLVIAIRRRRRMGQPRKPKKPPKWQASVDTM
                     TPLFAMALAPVLQPWGLIAAGAATVVEAKLSSAQSYIALFLFCVLASASYLAIEIYAG
                     FRPDQTFLIRFRSWIDSHTDQVIILGSFILGFWLIANSMYLIFT"
     gene            complement(1602..>1987)
                     /locus_tag="VFD73_13325"
     CDS             complement(1602..>1987)
                     /locus_tag="VFD73_13325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74979.1"
                     /translation="SAAGSFGLSFGLAFAGAIMLATLSLSFTSLATSSTVLSPAQQQQ
                     VAHALETDAQIMSNTQLEEQLASHPEKVQNEIIRINTDARHLALQIALLIPILAGAFG
                     LLNSFRMMRLPDPVPSETAEGMVLG"
BASE COUNT          368 a          642 c          650 g          327 t
ORIGIN      
        1 gcgaatatgc gctgttcatg gcgttgacaa agccatcgaa cagcagaccg gtgatcacca
       61 cgtaagtgag gccggccacc aggccccagc cgatcgcgcg cgccgcgcgc tggcccatcc
      121 agcggtggag caggtgcgcg atccagtggt ataggccgcg caggccgcgc ccgatcagca
      181 ggatcaggca gaacaccagc gccgcgacga acggggaggc caccacgagc gcgatgttgt
      241 actcggtcac ccccatcagc ccgcggatca ggtactgcca gtactgcccg agcccgaaga
      301 agaccacggt cagcacggcc gcgctgatga agaagatcag ccaggaccgt cgccgcgggc
      361 gccgcggcgc ccggtccggg aaagaccgcc agatctgcgc ggcgagcacg ccgaccccgt
      421 agccgatggc ggcggtgatg ccccagacga tgccctggat gatgccggtg cggggcaaca
      481 gcgacggggt gaaggacagg cacccggcga tcagcgcgcc ccagcagccg ggaagcgtga
      541 catatagcag cttcttacgc ttcccgggct ccgacgatgg ctgagggcct tcagcctcgt
      601 cggcggcttg gggacctgcg ggtggctgac cggctccggc cggttcggcg gtgcgctgcc
      661 ccgccacatc agaaggttca cccggtagcg aaccgaccgg cgtccccggt gtgtccaccg
      721 cctgctcctt taggccttga gccttggcat cctcttccaa gccctgtgat cgatatcgtt
      781 ccggtccacc tgtcacaagg gcatcaccca gcagagggtg atagtgccac ggtcagccgg
      841 tcggcgctgg aagctcaccc tgaaccgggc gaggtgccag ggccgtcacc acctgatgat
      901 caagttgaag ccaggacatg cgtcccgggg agtcggccga gctcttacca ggcagaagcg
      961 agatagggga cggctgcggt gcaagcgcgg cgtgcgcaag ggcgcggcat tcgtgttcgg
     1021 gtggctggtg cccctggcga tcgtcgtcac gatcacggtg ctggccacgg gcaatagccc
     1081 cccaagccga acacggtccc ctccctggcg tcgcgggcgg tgaagatcgc catcggagtg
     1141 gtcctgcttg tgatcgcgat ccggcggcgc cgcaggatgg gccaacctag gaaaccgaag
     1201 aagccaccaa agtggcaggc gtccgtggac accatgaccc cgttgttcgc catggccctg
     1261 gcgcccgtac tccagccctg gggcctgatc gccgcgggtg ctgccacggt cgtcgaggcc
     1321 aagctgtcca gtgcccagag ctacatcgcg ctgttccttt tctgcgtcct cgcctcggcc
     1381 tcctacctgg ccatcgagat ctacgccggt ttcaggcccg accagacctt cctgatcagg
     1441 ttcaggagct ggatcgactc tcacaccgac caggtgatca tcctcgggag ctttatcctc
     1501 ggtttctggc tcatcgcaaa tagcatgtac ctgatcttca cctgagattg agctccttgc
     1561 gggcagagcc ccgtcccgga cagctagccg ctggccggaa atcagcccag aaccatgcct
     1621 tcagcggttt ccgaaggcac gggatctggg aggcgcatca tgcggaacga attgagcagc
     1681 ccaaaggcgc cggcgagaat cggaatgaga agtgctatct gaagggccag atgcctagcg
     1741 tccgtgttaa tgcggataat ctcgttctgg actttctcgg gatggctggc gagttgctct
     1801 tcaagctggg tgttgctcat tatctgagcg tcagtctcca gcgcatgcgc aacctgctgc
     1861 tgctgggccg gggaaagcac ggtgctcgaa gtggccaagc tggtgaagct gagggagagc
     1921 gtggccagca tgatggcgcc ggcaaacgcc agcccgaacg acagcccgaa cgatccggcg
     1981 gccgaat
//
LOCUS       DASRPQ010001168         1464 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_138150, whole genome shotgun sequence.
ACCESSION   DASRPQ010001168 DASRPQ010000000
VERSION     DASRPQ010001168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1464
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138150"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..677
                     /locus_tag="VFD73_13330"
     CDS             <1..677
                     /locus_tag="VFD73_13330"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HZI74980.1"
                     /translation="VTFKVKDGISLATHTDAVHFSLHYTAQGSNASNDMLLRTSTVID
                     ERQERVPGLRTRYLNGDVPPEQVARISCTLGLPDGSGYVKLASSDASVQPSFNYCYLR
                     HPNDVRRVRDGVRLAAELLESNAYKDVVDHRIHPTNDILANDYALDLWIRRTVGTARH
                     VSGTCRMGPDSDAMAVVDQYSRVKGIEGLWVADASVMPRIPRSGGAHATVIMIAERVA
                     DWITAG"
     gene            complement(718..793)
                     /locus_tag="VFD73_13335"
     tRNA            complement(718..793)
                     /locus_tag="VFD73_13335"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(758..760),aa:Ala,seq:cgc)
     gene            917..1216
                     /locus_tag="VFD73_13340"
     CDS             917..1216
                     /locus_tag="VFD73_13340"
                     /inference="COORDINATES: protein motif:HMM:NF014389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HZI74981.1"
                     /translation="MMALFWLIDRLLGLYIWAVILAAVFSVLTSFGVLDTRNRLVWTI
                     GDFLYRITEPGLRPIRNLLPNLGGIDISPIILILLLQALRMLLGELEVSLVRTVY"
BASE COUNT          282 a          469 c          435 g          278 t
ORIGIN      
        1 aagtgacctt caaggtcaaa gacggcattt cacttgctac acataccgat gcggttcact
       61 tcagtttgca ctacacggcg caaggatcca acgccagcaa cgacatgttg cttaggacca
      121 gtaccgtgat cgatgaacgg caggagcgtg tgccgggcct gcgaaccagg tatctgaatg
      181 gcgatgttcc cccggagcag gtagcacgaa tttcctgcac gctcgggctg cctgatggtt
      241 ccggctacgt caaattggcc tcatccgatg ccagcgttca gccgtcattc aactactgtt
      301 acctccggca tccaaacgac gttcgacggg tgcgagatgg cgtgcgactg gcagccgaac
      361 tactggaatc gaacgcgtac aaggacgtgg tcgatcaccg gatccatccc acaaatgaca
      421 tcctggccaa cgactatgcc ctggatctct ggatccgtag gaccgtgggc acagccagac
      481 atgtatccgg gacctgcaga atggggccgg actccgatgc gatggccgtc gtggaccagt
      541 actccagggt caagggcatc gaaggcctat gggtcgctga cgcgtcggtc atgccgcgca
      601 tccccaggtc aggcggagcc cacgcaacgg taatcatgat agcggaacga gtcgcggatt
      661 ggataacggc cgggtagagt gttcgtacct tgcgtgggaa catctgcggc gggacgatgg
      721 tggagctgag gggactcgaa cccctgaccc cctcattgcg aacgaggtgc tctcccagct
      781 gagctacagc cccgtcccgc agggcgcgga caatgctcag agccctccgc ccaagtcaag
      841 cgacgagacc cacaacaggt tgcggagcga ttcctcgccc gctagcttcc gccgaccttc
      901 gggagacccg ccaccgatga tggccctgtt ttggctcatc gaccgtctgc tcggccttta
      961 tatctgggca gtgatcctgg ccgctgtgtt cagcgtcctg accagcttcg gtgtgctgga
     1021 cacaaggaac cggctagtct ggaccattgg cgacttcctt taccgcatca ctgagcccgg
     1081 cctgcggccg atccgcaatc tgctgcccaa cctcggcggc atagatatca gccccatcat
     1141 tctgatcctg ctgctgcagg cgctacgaat gctgctgggc gagctcgaag tcagtctcgt
     1201 gcggaccgtc tattgagccg cttctggcgc tccctccctg acggcatttc cattgcggtg
     1261 aaggtgcacc cgagatcgca ccggcccggt ctgcacggta ctgccccgtc cccaactggc
     1321 gagcggctgc ggatcgcagt gacggctccg ccggaaggcg gccgcgccaa cagcgccgtc
     1381 cgcgccaccc tggcagaagc gcttggtctg tcggtgtctg ctgtccgcgt aaccgctgga
     1441 gcgaccgccc gcgaaaagac gctc
//
LOCUS       DASRPQ010001169         3031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_138227, whole genome shotgun sequence.
ACCESSION   DASRPQ010001169 DASRPQ010000000
VERSION     DASRPQ010001169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3031
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138227"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1300
                     /locus_tag="VFD73_13345"
     CDS             <1..1300
                     /locus_tag="VFD73_13345"
                     /inference="COORDINATES: protein motif:HMM:NF014788.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AIR synthase related protein"
                     /protein_id="HZI74982.1"
                     /translation="QVPQVQAVCAKWELTATPIGQVTDDGIYRVKHHGQVVVAIPAQR
                     LVNDCPTYSPDAEESEEARRRRSVIEPGDPVVDLEGALELLLDNPNIASKRWVYEQYD
                     STVLASTVLPPGSDAGVIRVPGTHFGLAMSIDCNSRLVALDPYEGGKAAVAEAARNVA
                     ATGARPLGITNCLNFGNPERPEVFFQFREACRGIADACRAFGTPVTGGNVSFYNESPS
                     GAIDPTPTIGMIGLLSRVEHRTGSHFDSPDDEVFIVGLTSGILGGSTYWAEVCDFLGG
                     DAPAVDLDAELRLQKFLVSAAEQRLIRSAHDCSEGGLAVTLAEAVIGGPYVPGSLGAR
                     LDLTGYAPDVPLDGLLFGEDGARAVVSCSQGSARSLIALADTLGVPIFRAGVVQSAGT
                     LELQVGSQLFSWSTEALRRIYFDAIPRRMQHPDVDRTAEE"
     gene            1302..2696
                     /gene="purF"
                     /locus_tag="VFD73_13350"
     CDS             1302..2696
                     /gene="purF"
                     /locus_tag="VFD73_13350"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HZI74983.1"
                     /translation="MCGIIGVSGLPDAARLAYLGLYALQHRGQESAGIVAIDREGVAR
                     SHRGMGLVSENFDDQILASLPGDIAVGHTRYSTTGSTVLANAQPCNVATRCGPLAIAH
                     NGNLINADPIKRELVERGAIFTSSSDTEVLVHLIARSEAQSVDRQIREALEQVDGAYS
                     LVITVGRTMYAVVDSRGFRPLVLGRLGSGIVVASETCALDLIGATFSCELRPGDFVRI
                     DNGHVTHLPRLAPRPVSRCVFELVYFARPDSMLFGESVDRVRRELGRQLGREQPAPGG
                     EVVFSVPDSSNAMALGFSEASGIKLEYGLIRNHYVGRTFINPTQALRQAKVKIKFNPV
                     REVIHGKSVVVVDDSLVRGNTSKELVQMIRAAGAREVHLRLGSPPITGPCHYGIDTPN
                     RNELIAATHSVEEIRQFLGVDTLGYLSLNGMLQAAGNETGFCHACFSGQYPTPTPDDP
                     MRLRHATPLISTPA"
     gene            2693..>3031
                     /locus_tag="VFD73_13355"
     CDS             2693..>3031
                     /locus_tag="VFD73_13355"
                     /inference="COORDINATES: protein motif:HMM:NF013491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HZI74984.1"
                     /translation="MSGPYTQPLVYSFGQGRADGTAAMKDILGGKGAGLAEMTTIGIP
                     VPPGFTIASSLCIHYLEHGNFPKRLQAQVENALQRLEAATGKHLGDGENPLLVSVRSG
                     AAVSMPGMMET"
BASE COUNT          549 a          959 c          966 g          557 t
ORIGIN      
        1 ccaggtgccg caagtgcagg cggtctgcgc caagtgggaa ttgaccgcga caccgatcgg
       61 tcaggtgacc gatgatggga tttatcgggt gaagcaccac ggccaggtcg ttgtcgccat
      121 accggcacag cggctggtga acgactgtcc cacctattcg cccgatgccg aggaaagcga
      181 agaagcccgg cgccgccgct cggtgatcga accaggtgac ccggtcgtgg acctcgaagg
      241 cgcgctggag ctgctgctcg acaatcccaa catcgccagc aagcgctggg tctacgagca
      301 gtatgactcc accgtgctcg cctcgaccgt tcttccgccc ggctcagatg ccggcgtcat
      361 ccgggtcccc ggaacccact tcggcttggc catgtcgatc gactgcaatt cccgactggt
      421 ggcgctggat ccctacgagg gaggcaaggc cgcggtcgct gaagcagctc ggaacgtggc
      481 cgccaccggc gcgaggccat tgggcatcac caactgcctc aactttggaa atccggaaag
      541 acccgaggtg ttcttccagt ttcgcgaggc gtgccgcggg attgccgatg cctgtcgcgc
      601 cttcggcacc ccggtaaccg ggggaaatgt gtcgttctac aacgagagcc cttctggtgc
      661 gatcgatccc accccgacca tcgggatgat cggtttgctc tcccgggtcg agcaccggac
      721 cggcagccac ttcgattcgc cagacgacga ggtgttcatc gtgggcctga ccagcggcat
      781 tctgggcggc tctacgtatt gggcagaggt ctgcgatttc ctgggcgggg atgctccggc
      841 ggtcgatctc gacgccgagc tgagactaca aaagtttctg gtctccgccg cggagcaacg
      901 gctgatccgg tcagcccacg actgctcgga gggcgggctg gcggtaaccc tggccgaggc
      961 ggttatcggg gggccctacg ttccaggcag cctaggagcc aggctggacc tgaccgggta
     1021 tgctcccgac gtaccgctgg acggcctcct ctttggggaa gacggcgccc gagcggtggt
     1081 ctcctgctcc caaggctccg cccgatcgct gatcgcgctg gctgataccc tgggggtgcc
     1141 catcttccgc gccggagtgg tgcagagcgc cggcactctg gaacttcaag tcggatctca
     1201 gttgttctcc tggagcaccg aagcgctacg gcgaatctac tttgatgcga ttccacgtcg
     1261 gatgcagcac cctgacgtgg atcgcacggc agaggaatag catgtgcggt atcatcggcg
     1321 tatcgggtct tcctgatgca gcccggctgg cctatctcgg actctatgct ctgcagcatc
     1381 gggggcagga gagcgccggc attgtcgcaa tcgaccggga gggggtggct cggtcccacc
     1441 gcgggatggg actggtctcg gaaaatttcg acgatcagat cctggccagc cttcctggtg
     1501 acatagcggt cggtcacacc cgctattcca ccaccggaag cacggtgctg gccaacgccc
     1561 agccgtgtaa cgtcgctacc cgatgcggtc ccctggcaat cgcccacaac ggcaatctca
     1621 tcaacgcaga cccgatcaag cgggagctgg tcgaacgggg agcgatcttc accagctcga
     1681 gcgacaccga agtcctcgtc catctgatcg cgcggtctga agctcagtca gtggacaggc
     1741 agattcgcga ggcgctggag caagtggacg gtgcgtatag tctcgtgatc actgtcggcc
     1801 gaacgatgta tgccgtggtg gatagcaggg gatttcgtcc tctggtgctg ggacgattgg
     1861 ggagcgggat cgtggtggcg tcggagacct gcgcgctgga tctgatcggc gccaccttca
     1921 gctgcgagct tcggccgggc gacttcgtac gaatcgacaa cgggcacgtg acccatctgc
     1981 cccgtctggc acctcgcccg gtgagccgtt gtgtattcga gctggtgtat ttcgcccgtc
     2041 ccgacagcat gctctttggc gaatcggtgg atcgggtgcg ccgggaactg ggacgccagc
     2101 tgggccggga acaaccggca ccgggaggcg aggtggtgtt cagtgtaccc gatagctcca
     2161 acgccatggc gctggggttt tcggaggcct cggggatcaa gctcgaatat ggcctgattc
     2221 gcaaccacta cgtgggccgg acattcatca atccaaccca ggccctccgg caggccaagg
     2281 tcaagatcaa gttcaatccg gtgcgtgagg tgatccacgg gaagtcggtc gtggtggtcg
     2341 acgacagcct ggttcggggc aacaccagca aggagctggt acagatgatc cgggccgccg
     2401 gtgcccggga agtgcatctg aggctcggct cgccgccgat caccgggccc tgtcactacg
     2461 gaatcgacac gcccaatcgc aacgagctca ttgccgcaac tcactcagtc gaagagatcc
     2521 gccagtttct cggcgtggat accctgggct acctctcact gaacggcatg ctgcaggcag
     2581 caggcaatga aaccggcttc tgccatgcct gcttctccgg ccagtacccc actcccactc
     2641 ctgacgaccc gatgcgtctg cgccatgcca caccgttgat ctcgacccct gcatgagcgg
     2701 cccgtacacc cagccgctcg tctactcgtt tggtcaggga cgggcggatg gcactgccgc
     2761 catgaaggac attctcggcg gcaagggcgc cgggctcgcc gagatgacca ccatcggaat
     2821 accagttcct cccggattca ccatcgccag cagtctctgc attcattatc tcgaacacgg
     2881 aaactttccg aagcgactcc aggcccaggt ggaaaacgcg ctgcagcgcc tggaggccgc
     2941 gaccggtaag cacctgggag acggtgagaa cccgctcctg gtctcggttc gctcaggcgc
     3001 tgccgtcagc atgcccggca tgatggagac c
//
LOCUS       DASRPQ010001170         1430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4210384, whole genome shotgun sequence.
ACCESSION   DASRPQ010001170 DASRPQ010000000
VERSION     DASRPQ010001170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1430
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4210384"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..460)
                     /locus_tag="VFD73_13360"
     CDS             complement(<1..460)
                     /locus_tag="VFD73_13360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74985.1"
                     /translation="MAHAQLPVLRRGFGETMRKDWWWVQPAVVFLLLSAFICYATWAA
                     FQGEYYTYGPYLSPFYSPDLFGNSPHAWFGPKPGWWPGWLVFSPALLILPFPGLFRVT
                     CYYYRGAYYKAFWADPPACAVGEPRKTYCGEAAFPLIVQNIHRYFLYVALL"
     gene            complement(536..1144)
                     /locus_tag="VFD73_13365"
     CDS             complement(536..1144)
                     /locus_tag="VFD73_13365"
                     /inference="COORDINATES: protein motif:HMM:NF028004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P460 family protein"
                     /protein_id="HZI74986.1"
                     /translation="MFRLLSPTRSLVRATIVLLTSTLLSQPTFAQANSIPADQLPQFT
                     PDGSLREPSNWETWVMVGASTGLSYNAPAAAPAAGAAPGTFHNVYMQPWAYREFMKTG
                     VFPERTMLVLSFFDASRKSAPAKAGFYEGDRVPDIDIHLKRKGIDQTGWAFFGFTDGA
                     AVGGKLPSSASCYSCHATEAAHDNVFTQFYPFLRTRLPSARH"
BASE COUNT          286 a          409 c          504 g          231 t
ORIGIN      
        1 aaagcaatgc gacgtaaagg aagtagcgat ggatgttctg tacgatgagg gggaaggctg
       61 cctcgccgca gtacgtcttt ctcggctcgc ccaccgcgca cgcgggtgga tcggcccaga
      121 acgccttgta gtacgctccc cgatagtagt agcaggtgac ccggaagagc cctgggaagg
      181 gaaggatcag cagtgcggga gagaacacca gccagcccgg ccaccagccc ggtttgggtc
      241 cgaaccacgc gtggggcgag ttgccgaaca ggtcaggtga gtagaagggc gagaggtacg
      301 gaccgtaggt gtagtactcg ccctgaaatg ctgcccaggt ggcgtagcag atgaaggcgg
      361 agagcagcag gaagacgacg gcgggctgca cccaccacca gtccttccgc atggtctcgc
      421 cgaagccgcg acgaaggacc gggagctgcg cgtgcgccat gccgatgctc tccctggctg
      481 gaccgaagat ctgaactgaa gcagggaggg atattcaagg gaacctaccg gcgtgtcaat
      541 gccgcgcgct tggcagtcgg gtccgcagga acgggtaaaa ctgagtgaag acgttgtcgt
      601 gcgctgcctc ggtggcgtgg cagctgtagc atgatgccga ggaagggagc ttgccgccca
      661 ccgcggcgcc gtcggtgaag ccgaagaacg cccagccggt ctgatcgatg cccttccgct
      721 tcaggtggat gtcgatgtcc ggcactcggt ctccctcgta gaaccccgct ttggcgggag
      781 ccgactttct ggaggcatcg aagaaggaga gcaccagcat cgtgcgctcg ggaaagacgc
      841 cggtcttcat gaactcgcgg taggcccacg gctgcatata cacgttgtgg aacgtaccgg
      901 gcgccgcgcc ggctgcggga gcggcggccg gtgcgttgta ggagagcccg gtcgacgccc
      961 cgaccatgac ccaggtttcc caattgctcg gctcacggag tgagccatcg ggagtgaact
     1021 ggggcagctg gtcggctggg attgagttgg cttgagcgaa agttggttga ctgagcagag
     1081 tcgaggtcag cagaacaatc gtcgcgcgga ccaaggaacg tgtcggggaa agcaggcgaa
     1141 acacggctgg ttcctcacgg aagcgggtga ggtactgggg ttctcctctc tacgatgagg
     1201 tccaggtgcg gtttcaggac caaacagtcg ggatgtttgg ccgggcgacg ttctgtcctc
     1261 cgggcgccca cgcagcagct acgctcgcgc cacggtgtac gaggtagaga ggcagctgct
     1321 gacgcgccct gtggacagaa cgtccccccg tccgccacta tccggtggca gatcaaccgc
     1381 gctgactcgc ggcgggtacg ccctgaagcg cgcgcagcaa ccgccagcag
//
LOCUS       DASRPQ010001171         1452 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3291992, whole genome shotgun sequence.
ACCESSION   DASRPQ010001171 DASRPQ010000000
VERSION     DASRPQ010001171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1452
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3291992"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1102)
                     /locus_tag="VFD73_13370"
     CDS             complement(<1..1102)
                     /locus_tag="VFD73_13370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HZI74987.1"
                     /translation="MADIGLAALSVFFTQSPSFLDHQRQLETGHGRSNCQTLFGISRI
                     PTDNHIRNMLDPVAPDHLFPAFAAAVAALERSGGIRAFQRLGSHLLIALDGTEYHRSA
                     KVHCRHCSTRTRKGQPTESFHTLLCATIVAPGRAQVVPLEPEFIRPQDGHDKQDCESR
                     AVRRWLKRHGARYKRLNPIYLGDDLHACQPVCEAVLEQGGHFLFTCKPASHQTLQEYL
                     TGIEPEEHVEQVKRGRERTTDRYRWLCGVPLRSDEEALTVNWLMIEILNAKGEVTYRN
                     SFITDLPVTRETVAELAACGRARWKIENESFNVLKNRGYHLEHNFGHGKEHLAALLAC
                     FNLVAFAIHTVCDLASGAWRHARETLGPRTRFF"
BASE COUNT          246 a          444 c          490 g          272 t
ORIGIN      
        1 ggaagaagcg ggttcggggt ccaagcgtct cgcgggcgtg ccgccaagcg cctgaggcga
       61 ggtcgcagac ggtgtggatt gcaaacgcca cgagattgaa gcacgccagc agcgccgcga
      121 ggtgctcctt cccgtgcccg aagttgtgct ccaggtgata gcccctgttc ttgagcacat
      181 tgaagctctc gttttcgatc ttccaccgcg cccgtccgca ggccgcaagc tcggccacag
      241 tctcgcgcgt aaccgggaga tcggtgatga agctgttgcg gtaggtgacc tcgcccttgg
      301 cgttcaggat ctcgatcatc agccagttga cggtcagcgc ctcctcgtcg ctgcgcaacg
      361 gcaccccgca gagccagcga tagcggtcgg tggtgcgttc gcgcccccgc ttgacctgct
      421 cgacgtgctc ctccggttcg atgcccgtga ggtactcctg gagggtctga tgcgatgcgg
      481 gcttgcaggt gaacaggaag tgcccgccct gctcaagcac cgcctcgcac acgggctggc
      541 aggcatggag atcgtcgccg aggtagatcg ggttcagccg tttgtagcgg gcgccgtgcc
      601 gcttgagcca gcgccgcacg gcgcggctct cgcagtcctg cttgtcgtga ccgtcttgcg
      661 gcctgatgaa ctccggctcg agcgggacca cctgggcacg gcccggggcc acgatggtgg
      721 cgcacagcag ggtgtggaag gactcggtcg gctggccttt tcgggtgcgg gtggagcagt
      781 gccgacagtg gaccttggcg gagcggtggt actcggtgcc gtccagcgcg atcagcaggt
      841 gtgagccgag ccgctggaag gccctgatcc cgccggagcg ctcgagcgcc gcaaccgccg
      901 cggcgaacgc cggaaagagg tgatcgggcg ccaccggatc gagcatgttg cggatgtggt
      961 tgtcggtggg aatgcggctg atgccaaaca gggtctggca gttcgagcgg ccgtggccgg
     1021 tctcaagctg gcgctgatga tccaggaagg acgggctctg ggtgaagaac accgacaagg
     1081 cggccaagcc gatgtcggcc atggtatatt gtctgttggc tcccgtgcgc gtgtctggga
     1141 acccctcaca gcagcgccgc acgacgctca gccggctgtc gagcacctcc atcccgacct
     1201 tgaatcagac ccaaccggcc aaaactagcc gcccaatcct tttccaagcc ggtgtggtcc
     1261 ttcggcctca cccccgtcca ccaaaatgag aactgcttca tggggcgaga ggcccttgtg
     1321 ggcttttttg aattctggca agatttcggc ttgttaggac agtgttgctg tcctattttt
     1381 agggcgcagt ttgcgcccga ggagacccga ggacgatgat tcgttcgacg gccaaaaaag
     1441 atcagaacgc cc
//
LOCUS       DASRPQ010001172         2557 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3292074, whole genome shotgun sequence.
ACCESSION   DASRPQ010001172 DASRPQ010000000
VERSION     DASRPQ010001172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2557
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3292074"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(591..1031)
                     /locus_tag="VFD73_13375"
     CDS             complement(591..1031)
                     /locus_tag="VFD73_13375"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HZI74988.1"
                     /translation="MPLIRFRDPSRDLTDLQTQMNQIFDHALGQSAGMMDRSWAPPAD
                     MGETPDELIVYVDLPGLSEKDIRVAITGDLLMIQGERPLREPNQEASHYRRERWFGKF
                     ERTFALSIPVEAGRIRATYRDGVLIVRLPKAEGVKPKEIKIQAE"
     gene            complement(1185..1373)
                     /locus_tag="VFD73_13380"
     CDS             complement(1185..1373)
                     /locus_tag="VFD73_13380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74989.1"
                     /translation="MVPTWIATCACGWVSAAETTEELMLLLDTHRTQASPGQLHTVSI
                     KGQLVIPYQSPSHHRPPG"
     gene            complement(1378..1575)
                     /locus_tag="VFD73_13385"
     CDS             complement(1378..1575)
                     /locus_tag="VFD73_13385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74990.1"
                     /translation="MTVPRLDRQKSEQERDELVKQITDYRRQLEATPLANMGRCEDLA
                     GRIRRAEKRLADIQMRLGHTE"
     gene            2124..>2557
                     /locus_tag="VFD73_13390"
     CDS             2124..>2557
                     /locus_tag="VFD73_13390"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HZI74991.1"
                     /translation="MDRRAFLGTLAGGLLGAPLPTRAQPKIPRIGVLWPNPPATFEDF
                     RTGLTELGYVEGRNIALEYRWAQGNLDRLPQFAEELVKLKVDVIVTLGPPAAIAVKRA
                     TETVPIVVLAIDDPVASGLVSNLGRPGGNVTGTTRMLSEMST"
BASE COUNT          448 a          824 c          821 g          464 t
ORIGIN      
        1 tacaccgagg gcggagcttg gaagggctct tcgggatggc gggaagaatg accgggaatg
       61 tcgaggggct cacgctcgca tggctcaagg tcaagcagcc gacgtatcgg gaagtggagc
      121 gggggttcta caagccgtag agggagaacc ggctacttca cagcagattt ttaccagatt
      181 tttactaggc ggggactcac tcacggtcca ccgtgacctg catggcggac cgctggtggc
      241 tcacgtgtag ttgtggccgg tggcgcggct gcgccgagag tgacgtggac gcacacagac
      301 tcgcggcgga gcatgagcgc gagaacggca cgcacgtcgt caagatcgaa agccgcgacg
      361 acaaccgacg ccggggaatg acagcgcgac cgcagcgtcc ccgctggata tagttcctca
      421 ccccgcgtcg cgtccgccca gcgccgggca ggattgcctt gcggcagacg gagcagatcg
      481 ggttcggacg cgggtggcga ctcataccag gcccctccgt tgagtgcggc caggacgcca
      541 cgcccggccc aagtccaaac ctgagccggg cgtggcctgg accgaacggg ctattccgcc
      601 tgaatcttga tctctttcgg cttgacgccc tcggccttgg gcaggcgcac gatcagcacg
      661 ccatcccgat acgttgcccg tatccgtccg gcctcgaccg gtatggacag cgcgaaggtt
      721 cgctcgaact tcccgaacca ccgttcccgg cggtagtggc tggcctcctg gttaggctcc
      781 cgcaagggcc gctcgccctg gatcatcagg aggtcgccag tgatggccac acggatgtcc
      841 ttctcgctca ggccagggag gtcgacatag acgatcagct cgtcgggcgt ctcccccata
      901 tcagccggcg gagcccagga gcgatccatc atgccggctg actgccccag ggcgtgatca
      961 aagatctgat tcatctgcgt ctgcaggtcg gtaaggtccc gcgaggggtc ccgaaagcga
     1021 atgagtggca cggatggcct cctatctggg cggctgccca cccttgaact tagtcctgcc
     1081 agtcgggact tatagccggt cttccgccgt tgtcaagagc cctctgggat ggccaggttc
     1141 ggggtcgctt atagcgctcc ccaccaggcc gggccgtacc tagcctaccc ggggggccga
     1201 tgatgagacg gcgattggta agggatgacc agttgcccct tgatggagac ggtatgaagc
     1261 tggcccggcg aggcctgggt ccggtgtgtg tcgaggagca gcatcaactc ctctgtggtc
     1321 tcggctgccg acacccagcc gcaggcacag gtggcgatcc aggtcgggac catgtggcta
     1381 ttcagtatgt cctagtcgca tctggatatc cgccagccgc ttctccgctc gcctgattcg
     1441 ccccgccaag tcttcacacc gacccatatt cgcaagcggg gtcgcctcga gctgacggcg
     1501 atagtccgtg atctgtttaa ccagttcgtc tcgctcctgc tccgactttt gccggtcgag
     1561 gcggggcacg gtcacgcgct cctggacacg ggtcattcat gaggcggggc tgggtctgtc
     1621 gcctggactg ggggccctcc ccctgcttcg tccgtcgagc ggggacaggc cgggcactcg
     1681 tggtacatcc tgaccacgcc tccttcccgc ttcaacacgc tcgccatcgt acggccgcac
     1741 ttgggacaat ttggcattac gtcgctccac tgagcgggcc tcgagcaaac cacatgccga
     1801 cgccgaaacc ccgatctgtc ggcctcttcc ggagtttcca ggaagagcaa caagcagaaa
     1861 gtaccgcgac agccttacag agggggtcgt cctgccgact gcgcggccgc gctgagcacc
     1921 atgtggaaag ctcgacggcg gcaaggacgg cgcatgagtc ctggctaacg tgctcaagcg
     1981 gcgctcgggt cgtccaccta gccagtccgc ctcctccagc cgctgccgag cgtgactccc
     2041 gcaggtgagc cggctgtagt aaggtcgctg ctggccgccc gtcccgtccc tcctagatga
     2101 cgcggccagg tgagggcttg gttgtggacc gacgagcatt cctcgggacg ctggctggcg
     2161 gcctcctcgg cgcgcctctt ccgactaggg cacagccgaa gatcccgcgc atcggcgtgc
     2221 tttggcccaa cccgcccgcg acattcgaag actttcgtac tggtctcacc gaactcggat
     2281 atgtcgaggg ccgcaacatc gcgctcgaat accgctgggc ccagggcaac ctcgatcgac
     2341 tgccccagtt cgcggaagag ctggtcaaac tcaaggttga tgtaatcgtg acgctcggtc
     2401 ccccggcggc gatcgcggtg aagcgtgcga ccgagacggt cccgattgtg gtgttggcaa
     2461 tcgacgatcc agtggcaagc gggctcgtgt ccaacctcgg ccgtcctggt ggtaacgtga
     2521 ccggcacaac ccgcatgctg tcggagatga gtaccaa
//
LOCUS       DASRPQ010001173         1273 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_138610, whole genome shotgun sequence.
ACCESSION   DASRPQ010001173 DASRPQ010000000
VERSION     DASRPQ010001173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1273
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138610"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..943)
                     /locus_tag="VFD73_13395"
     CDS             complement(<1..943)
                     /locus_tag="VFD73_13395"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 family protein"
                     /protein_id="HZI74992.1"
                     /translation="MEQRISTATDSSVDDLCRSYLDLKYHFDPASGSAAGLISEDGRL
                     GRFDAESMREHLSALRSVTGALEELDTSDVQREIDRTALLGEIRSALYRWQHEQPHVR
                     NPSFWLSHLFQSLYSLLTRSGADLASRASAVVARLEAAPGFIDAGRATIESPASVFVD
                     TALSMLGGGGELIAQVVAVFGQAAPDLSGQLQQSGEAALKALVGFGAALRNEIEPNPN
                     PTAFAVGEAQFTRTLQHEHALSAGPAELWRYGLRLQEEVTGQIVELAGRLSSKPWRQL
                     VEELREDSPEPGDLLGVYRSEVERARSFLSEHQLMDLP"
     gene            complement(947..>1273)
                     /locus_tag="VFD73_13400"
     CDS             complement(947..>1273)
                     /locus_tag="VFD73_13400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74993.1"
                     /translation="DTLLETNEILLRKGAARRRDFPGVTIRDPVYIEDGVTIEKSEIG
                     PNVSIEQGTKISGSRISHSIIGRDSTLTQAQLTGSMVGNAVVINGFQGSASLSDNSEL
                     TAKPQP"
BASE COUNT          226 a          422 c          390 g          235 t
ORIGIN      
        1 ccggcaggtc catcagctgg tgttcgctca ggaagcttcg agcccgctcg acttccgatc
       61 ggtagacgcc gagtagatca ccaggctctg gcgaatcctc tcggagctcc tccaccagct
      121 gccgccacgg tttcgagctc aggcggccgg caagttcgac gatttgtccg gtgacttcct
      181 cctgcagccg tagcccgtag cgccacaact ccgccggccc ggccgacaac gcatgctcat
      241 gttgcagtgt ccgggtgaac tgcgcctcgc ccacagcgaa ggcggtcggg ttcggattgg
      301 gctcgatctc gttccgaagg gcggcaccga atccaaccag cgccttgagc gcggcttcgc
      361 cggactgctg aagctgcccg ctcagatcgg gggcggcctg gccaaagacc gcgaccacct
      421 gagcgatcaa ttccccgccc cctccgagca tgctgagcgc ggtgtcaacg aacaccgatg
      481 ccgggctttc tatcgtcgct ctgccggcat cgatgaaccc gggcgcggcc tccaaccggg
      541 ccaccactgc tgaggcgcgg ctcgcgagat cagcgccgct gcgggtcaga agggaataga
      601 gggattggaa caggtgagac agccagaagg aaggattcct gacgtgcggc tgctcgtgtt
      661 gccatcggta cagtgcagag cggatttcgc ccaggagcgc ggtgcggtcg atctcccgct
      721 gcacatcgct ggtatccagc tcctcgaggg caccggtcac cgagcgcaac gccgagaggt
      781 gctctcgcat cgactccgca tcgaagcggc ccagtcgccc atcttcggag atcaatccgg
      841 cagcactgcc ggatgccgga tcgaagtgat acttgagatc caggtaggac cggcagagat
      901 cgtcgacgga agaatcggtg gcggtagaga tcctttgctc catcactcag ggctgcggct
      961 tcgctgttag ctccgaattg tcggagagac tggcgctgcc ctggaacccg ttgatcacca
     1021 cggcattccc caccatcgac ccggtgagct gcgcctgcgt cagagtactg tcccgcccaa
     1081 tgatcgaatg gctgatccgg ctgccgctga ttttcgtccc ctgctcgatc gacacgttcg
     1141 ggccaatctc actcttctcg atcgttacgc cgtcctcgat gtacaccgga tcccgaatgg
     1201 tgacaccggg gaagtcgcgc cggcgcgcgg cccctttgcg caacaggatc tcgttggtct
     1261 cgagcagcgt atc
//
LOCUS       DASRPQ010001174         1164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1717298, whole genome shotgun sequence.
ACCESSION   DASRPQ010001174 DASRPQ010000000
VERSION     DASRPQ010001174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1717298"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..570)
                     /locus_tag="VFD73_13405"
     CDS             complement(<1..570)
                     /locus_tag="VFD73_13405"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI74994.1"
                     /translation="MTPTPTAMPIPSTTWRSGRRVLRAIGRTLAALVGLIVVLGLVGA
                     SYESAAEAADVRAYPPPGQLVDVGGYRLHINCTGTGSPTVVIESGWGDMSAAWGWVQP
                     EVAKTTRVCTYDRAGMGWSEASPEPRVAREYAKELHTLLANAHETGPYVLVGHSMGGF
                     TVLVYAHDYPADVSGLVLVDSQDLPASDGA"
     gene            complement(886..1062)
                     /locus_tag="VFD73_13410"
     CDS             complement(886..1062)
                     /locus_tag="VFD73_13410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI74995.1"
                     /translation="MARTTAQLDDAVLVLPADAASLIPLHMPAWFAWLEHATTFVFTA
                     RKKRQAHGGEHCCT"
BASE COUNT          215 a          345 c          374 g          230 t
ORIGIN      
        1 agcgccatcc gaagcaggta agtcttgcga gtcaaccaat accaatcccg agacatcggc
       61 cggatagtca tgtgcataca ccagcacggt aaatcccccc atcgaatggc ccacgagcac
      121 atacgggccg gtttcatgcg cgtttgccag cagtgtatgc agctctttcg catattcgcg
      181 ggctactcgc ggctcgggac tagcctcgct ccaccccatc ccggcccgat cgtaggtgca
      241 gacgcgtgtg gtcttggcga cttcgggctg cacccaaccc cacgcggcag acatatcccc
      301 ccagccggat tcgatcacca ccgtagggct gcccgtcccc gtgcagttga tgtgcagacg
      361 ataaccgccc acatcgacca actgaccagg cgggggatag gcccgcacat cggcggcttc
      421 cgccgccgac tcgtagctcg ccccaaccag tccgaggacg acgatcagtc caaccagcgc
      481 ggccagcgtg cggccaatcg cacgcagcac ccgtcgaccg ctgcgccagg tagtggatgg
      541 tatcggcatt gccgtaggag taggcgtcat gatggtttcc tttcgtgtgt tccttgctcg
      601 tacctatcgt ccgttccgct ccgtcttgtt gtatcaacag gcacagcata gcggatggat
      661 gggtggagcc gcaccaaacc aaaggtgggg tggtgggtgg gttcttcgtt aagggcgagg
      721 agaaagccgg aggcgagagc aggtggaggt cgcgcgccag tccgatcgcc tgggtgcggc
      781 tggtgacctg gagcttgctg aacatgctgt tggtatgggt cttgaccgtg ctgatggcga
      841 tcagcagtgc tcgcgcgact tcgggtttgg aggtgctgct cgcgatcagg tgcagcaatg
      901 ctcgccgccg tgggcctgcc gcttcttgcg ggcggtaaac acgaatgtgg ttgcgtgctc
      961 cagccaggca aaccaggccg gcatgtgcag cggaatgagg ctggcagcat ccgcaggaag
     1021 aaccaacacg gcatcatcga gctgtgcagt cgtgcgcgcc aatgcgagta ccttccgcta
     1081 tcggttgggg tgtgttcggg atgttatggt aagagcatac ggtgggttcg ggctccgtgc
     1141 aggctggttg agttgcgtca acgt
//
LOCUS       DASRPQ010001175         1518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2668337, whole genome shotgun sequence.
ACCESSION   DASRPQ010001175 DASRPQ010000000
VERSION     DASRPQ010001175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2668337"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..684
                     /locus_tag="VFD73_13415"
     CDS             <1..684
                     /locus_tag="VFD73_13415"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HZI74996.1"
                     /translation="GFRGEGERGYNQGYGQSGWGQGGYGQGGYGQQGYREGGYGQQGY
                     GQGSYGQSGYGQQGYGQSGYGQGGYSRSGFGQESGYGQSDYDRGFGPRAIGYSSTTYI
                     IGRFSGRGPKGYRRSDDRIREDVSEELTRHPEIDASEIDVQVQNGEVTLTGKVEDRHQ
                     KRLAEDIAERCSGVNDVHNQLKVDKGFFAKLFGSEEEDRDRTRDQIGSGSSTERSGTS
                     RSRSTSTTR"
     gene            complement(743..>1518)
                     /locus_tag="VFD73_13420"
     CDS             complement(743..>1518)
                     /locus_tag="VFD73_13420"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI74997.1"
                     /translation="SIPSDEAFRRAKAAAARALEIDSGLAEAHAVLGHIKYACDYDWA
                     GAEAELRLALELDPNSGDTYDIYGLMLASLERYDEAIKMQRRAHELDPLAHRMDIATT
                     FLRAGRYDEALKAVKRVLETEPHLALAHATLGWGYMLTGRTGDGIASLEKALSLSPES
                     TLYLGQLGQALAMAGRTEDARAVLRRLQELSGQRYVSPYHFAYVYTGLGEYEQALDWL
                     ERAYEERAGAVFGIKGSFLFTALRGHPRFHALLRKMNLT"
BASE COUNT          300 a          470 c          507 g          241 t
ORIGIN      
        1 gggttcagag gagagggcga gcgcggctat aaccagggtt acggccagtc cgggtgggga
       61 cagggtggat acggacaagg tgggtacggt cagcagggat atagagaagg cggctacggc
      121 cagcaaggat acgggcaggg aagctacggt cagagcggct atggccagca gggatatggc
      181 cagagcggct atggtcaggg tgggtattcc cggagcggct tcggtcagga atccggctat
      241 ggccaaagcg actatgatcg cggtttcggg ccgcgcgcca tcggctacag cagcaccacc
      301 tatatcattg gccggttcag cggccgcggc cccaaggggt atcgtcgctc cgacgaccgg
      361 atccgcgagg atgtgagcga agagctcact cggcaccccg agatcgacgc cagtgagatc
      421 gacgtgcagg tccagaacgg ggaagtgacg ctgaccggga aggtggaaga ccggcaccag
      481 aagcgcctgg ccgaagacat cgccgagcgg tgctcgggag tcaacgacgt gcacaaccag
      541 ctcaaggtgg ataaaggctt cttcgccaag ctgtttggaa gcgaagaaga ggatcgcgac
      601 cggacccgcg accagatcgg ctccggcagc tcgaccgagc ggagcggcac cagccgttct
      661 cggagcacca gcacgacccg ctaaccagct ggttccgcag tactggacca accggcctcg
      721 gtgaaaaccg gggccggttt gcttaggtca ggttcatctt cctgagcaag gcgtggaacc
      781 ggggatgccc gcgcagcgca gtaaagagaa aagagccctt gatgccgaac accgcgccgg
      841 ctcgttcctc gtaggcgcgc tccaaccagt ccagcgcctg ctcgtactcg cccaaaccgg
      901 tgtacacata tgcgaaatga tagggcgaga cgtagcgctg acctgagagc tcctgaagcc
      961 ggcggaggac ggcgcgggcg tcctcagtcc gccctgccat cgcgagcgcc tgccccagct
     1021 gtcccagata gagggtgctc tcgggtgaga gcgacaatgc cttttccagc gacgcgatgc
     1081 catctcccgt tcggccggtc aacatatagc cccaccccaa agtggcatgc gcgagcgcga
     1141 ggtgaggctc ggtctcgagc acgcgcttca ccgccttcag tgcctcgtca taccgcccgg
     1201 ctcgaaggaa ggtggtcgct atgtccatgc ggtgcgccag gggatcgagc tcgtgggccc
     1261 gccgctgcat cttgatcgct tcatcgtagc gctcgagcga cgccaacatc agcccgtaga
     1321 tgtcgtaggt gtctccgctg ttcggatcca gctcgagcgc cagcctgagc tcggcctccg
     1381 caccggccca atcgtagtcg caggcgtatt tgatgtgccc cagcactgca tgcgcctcgg
     1441 ctagcccgct gtcgatctcc agcgcccggg cggcggcggc cttcgcccgg cggaacgctt
     1501 catccgaggg aatcgatc
//
LOCUS       DASRPQ010001176         1060 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3903534, whole genome shotgun sequence.
ACCESSION   DASRPQ010001176 DASRPQ010000000
VERSION     DASRPQ010001176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3903534"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            175..>1060
                     /locus_tag="VFD73_13425"
     CDS             175..>1060
                     /locus_tag="VFD73_13425"
                     /inference="COORDINATES: protein motif:HMM:NF025079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4158 domain-containing protein"
                     /protein_id="HZI74998.1"
                     /translation="MIKSWTLSAHDHAEVMRCRGDANRRRFAVQLCTLRTYGRFLPEA
                     TPAPVAITNHLARQLALPLVLFGELPGRLATETEQLQRIREYLGWQPFDEAARARVTT
                     WLTQRATDDLLPSDLVARTEAILRSWQIVLPARSTVEELVASVTARTQDEVYTRIATG
                     LSAELQRAMDDLLTLPSGERRSALFHLKEYPPEASNAVIVQYIERYHLLRDLGVGRID
                     LSMVNAPMVRYLADLAKRYDVYELRRFPPVKRYALLGCFLVEIHKTILDHIVTLHDQL
                     LTKKMREAKNAFEKHYRQL"
BASE COUNT          195 a          355 c          302 g          208 t
ORIGIN      
        1 ctgtgccata ccctgcattt tcgagagtgt ctgtgggctg tgctaccctg gccgcaaagt
       61 atagtttata gccaggaggt tgcaaggcca cgcgggtccc agaggaggac gctcatgccc
      121 ctacatcgtc ataccccatc cctggtctta ccggacaatc ccagccccga ggagttgatc
      181 aagtcctgga cgctctccgc ccatgaccac gcggaagtca tgcgctgtcg gggggatgcg
      241 aatcggcgtc gctttgccgt ccagctctgc acgctgcgga cctatggccg ctttttgccg
      301 gaagcgaccc cggcgccggt ggccatcacc aatcatctgg cccggcagtt agctctcccg
      361 ctggtgctgt ttggggaact ccccgggcgg ctggccacgg agaccgagca gctccagcgc
      421 atccgggagt acttgggctg gcagcccttt gatgaggccg cccgtgcccg cgtgacgacg
      481 tggctgaccc agcgcgccac ggatgacctg ctcccgagtg atctcgtcgc acgcacggag
      541 gcgatcctcc gctcctggca gattgtcctg ccggcacggt ccacggtgga agagctcgtg
      601 gcgtccgtca cggcccgtac ccaggacgag gtgtataccc gtattgcgac gggcctgtcc
      661 gcggaactcc agcgcgccat ggacgatctc ctcaccctgc caagcggcga acgccgctcg
      721 gccttgtttc atcttaagga atatccgccg gaagccagca atgcggtgat cgtgcagtat
      781 attgagcgct atcacttgct ccgtgacctc ggcgtggggc gcatcgacct cagtatggtc
      841 aacgcaccca tggtgcgcta cctcgccgac ctcgccaaac ggtacgatgt ctatgaactc
      901 cggcgcttcc ccccggtcaa gcgctatgcc ctgctggggt gctttctcgt cgaaatccat
      961 aagaccattc tcgatcacat tgtgacctta cacgaccaac tgctgaccaa gaaaatgcgc
     1021 gaagccaaaa acgcctttga aaagcactac cgccaactcc
//
LOCUS       DASRPQ010001177         1062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1077193, whole genome shotgun sequence.
ACCESSION   DASRPQ010001177 DASRPQ010000000
VERSION     DASRPQ010001177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1077193"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(66..395)
                     /locus_tag="VFD73_13430"
     CDS             complement(66..395)
                     /locus_tag="VFD73_13430"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HZI74999.1"
                     /translation="MADLLPGTLEVLVLKALSLEPMHGWGIGHRIDQLSKDVFKVRQG
                     SLYPALQRMLRKGWIRSEWRTSENGRRARYYLLTAAGKHQLSAETADWQRASAAIDGI
                     LRLRMAD"
     gene            601..1035
                     /locus_tag="VFD73_13435"
     CDS             601..1035
                     /locus_tag="VFD73_13435"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HZI75000.1"
                     /translation="MTRALPDSIKYGALPLLVRFLISSEFVIAVNGKIFDWSGQGAYM
                     ASHGMTMIPFFLGAALAIELLGTLCLLTGFQAQRAAAVMFVYLGIVSVRLHDFWHMTG
                     MGASQNEGQFFKNLGMMGCLLMIAIYGPGRWVLGRSRADSRS"
BASE COUNT          175 a          339 c          351 g          197 t
ORIGIN      
        1 gaggtcttga gaccagcggc gcccgaatac gagaacccgc acgcgctcca gcaggtcggt
       61 gagcatcagt ccgccatccg gagacgaagg attccgtcga tggcggcgga ggcgcgctgc
      121 cagtccgcgg tttcggcgga gagctggtgt ttcccggcgg cggtcaagag gtagtagcgg
      181 gcgcggcggc cattctccga cgtccgccac tccgaccgga tccagccttt ccggagcatg
      241 cgttggaggg ccgggtacag cgagccttgc cggaccttga agacatcctt cgacagctgg
      301 tcgatgcggt ggccgatccc ccagccgtgc atcggctcga gggagagagc cttgaggacc
      361 aggacttcca gggtgccggg gagcaggtct gccatggctt cctccagttt aactagaggt
      421 aagacgctga gacccgggaa ttggtttcgt cggcccagtc atcacagaaa tagccctgct
      481 aacccccggc ccgtccttta gggcgtcagc cgggggtgac ccgatgctat cctgttccgg
      541 acacgcggga taccgagtta ccgcgtagga ggcgtgaacc ccattccgga gcctccgccc
      601 gtgacccgtg cactccccga ttcgatcaag tacggcgccc tgcccctcct ggtccgcttc
      661 ctcatctcct cggaattcgt gatcgccgtg aacggcaaga tcttcgactg gtcaggccag
      721 ggggcctaca tggcctccca cggcatgacc atgatcccct tcttcctcgg tgccgccctc
      781 gccatcgagc tcctcggcac cctctgcctg ttgaccggat ttcaggcgca gcgggccgcg
      841 gcggtgatgt tcgtctacct gggcatcgtg agcgtccggc tgcacgactt ctggcacatg
      901 acggggatgg gagcgagtca gaacgagggc cagttcttca agaacctggg gatgatgggg
      961 tgtctcctga tgatcgcgat ctatggaccg ggccggtggg tgctcggcag gtcccgggcc
     1021 gactcgcgga gttagccgac tgaatccggg tggccgacgg cg
//
LOCUS       DASRPQ010001178         1579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1398589, whole genome shotgun sequence.
ACCESSION   DASRPQ010001178 DASRPQ010000000
VERSION     DASRPQ010001178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1398589"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1310
                     /locus_tag="VFD73_13440"
     CDS             <1..1310
                     /locus_tag="VFD73_13440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75001.1"
                     /translation="FWTDRDHLELRREGERLKEHYRRVVFARANFPLTISRRFYGRFD
                     AYRSGSTELDDRGVIYVRQGAPTQRLRPFVFGAMPNESWRYQRGDGDLLFHFSSGYDG
                     YGGGDLYDYRLVESVFDLHGAADAPRDQLILSRQSLSPMYSRMLNWGRYGAANQQAQE
                     RDIGATSIAIGTTTDRYELTFAHRLLALADLLAIGRTGDRTRGHLVFGIPAAGVTPRV
                     VPGGVEYQVRVRVVALDRYNRAVATQDTTITVWHHQVLSKDEFIVGRAEIPLPPGHWS
                     YRAALQLGDSTGVVLPTDSVLVATSDPRVLSLSDIALGTPGRSVPWINDGGDSVFMAP
                     SQLFRRGLDVGLYYEVSGAVAGQQYRHHITVLRPGDRPELSAQHPLVSLSFDEAATGE
                     VIHSSRVVRMDQLKPGNYVVEVTVAGPDGRAQSRRRAIRLLDR"
     gene            complement(1315..>1579)
                     /locus_tag="VFD73_13445"
     CDS             complement(1315..>1579)
                     /locus_tag="VFD73_13445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003771338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GMP synthase (glutamine-hydrolyzing)"
                     /protein_id="HZI75002.1"
                     /translation="GLYDDIWQAFAVLLPIRSVGVQGDDRTYDQVIALRAVTSRDGMT
                     ADWYAFPPEVLARISNRIANEVEGVNRVVYDVSSKPPATIEWE"
BASE COUNT          275 a          498 c          515 g          291 t
ORIGIN      
        1 ggttctggac cgatcgcgat catctcgagt tgcgccgcga aggcgagcgc ctgaaggagc
       61 attatcgcag agtcgtgttc gcccgcgcca acttcccgct cacgatcagc cggcgattct
      121 acggaagatt cgacgcctac cgttccggca gcaccgagct ggacgatcgc ggggtgatct
      181 atgtgcgtca gggggcgccg acccagcgac tgcgcccctt cgtgttcgga gccatgccca
      241 atgagtcctg gcgctatcag cggggagacg gcgatctgtt attccacttc agcagcggat
      301 atgacggcta cggcggcggc gatttgtacg actatcggct ggtcgagagc gtgttcgatc
      361 tgcatggcgc ggcggatgcg ccccgagacc agctgattct ctcgcggcag tctctctccc
      421 cgatgtacag tcggatgctc aactggggtc gctacggagc cgccaatcag caggcgcagg
      481 agcgcgacat cggcgcgacg agtatcgcta tcggcacgac gaccgacagg tacgagctca
      541 ccttcgcaca ccggctgctc gcgctggcgg atctgctcgc tatcggccgg accggcgacc
      601 ggacccgggg acatctggtc ttcggaatcc cagccgcggg agtaaccccc cgcgttgtac
      661 ctggaggagt ggaataccag gtcagggtgc gcgtggtcgc cctggatagg tacaaccgcg
      721 ccgttgccac tcaggacacc acgatcactg tatggcacca tcaggtattg agcaaagacg
      781 aattcatcgt cggacgggcg gagatcccac tccctccggg gcactggagt tatcgggccg
      841 cgctccagct gggagacagc accggggtcg tgctgcccac cgactccgtg ctggtggcca
      901 ccagtgatcc tcgcgtcctc tcactcagcg atatcgcttt gggcacgccg ggtcggtcgg
      961 taccctggat caacgacggt ggagattcgg tcttcatggc tccctcacag ctcttccggc
     1021 gtgggctcga tgttgggctg tactatgaag tgagcggggc agtggccgga caacagtatc
     1081 gccaccacat caccgtgctt cggcccggcg accggcccga gctgtcggcg cagcacccgc
     1141 tggtatcgct gtcgttcgat gaggcggcaa ccggcgaggt catccactcc agccgagtgg
     1201 tgcggatgga ccagttgaag ccggggaact atgtggtgga ggtaactgtg gctggtcccg
     1261 atggccgggc tcagagccgg cgccgggcca tccgtcttct cgaccgatga aaggctactc
     1321 ccactcgatc gttgccgggg gtttcgagct gacgtcgtag accacccggt tcactccctc
     1381 gacttcgttg gcaatccggt tggagatccg ggccagaacc tccgggggaa aggcgtacca
     1441 atcggcggtc atgccgtctc ggctggtgac ggcccgaagc gcgatgacct ggtcgtaggt
     1501 tcgatcgtcc ccctgcactc cgacggaacg gatcggaagc agcaccgcaa acgcctgcca
     1561 gatgtcgtcg tagaggccg
//
LOCUS       DASRPQ010001179         1015 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4210886, whole genome shotgun sequence.
ACCESSION   DASRPQ010001179 DASRPQ010000000
VERSION     DASRPQ010001179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4210886"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..649
                     /locus_tag="VFD73_13450"
     CDS             <1..649
                     /locus_tag="VFD73_13450"
                     /inference="COORDINATES: protein motif:HMM:NF020133.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75003.1"
                     /translation="LEKRIPSRAGLGGGSSDAAATLHAVDALAGNVVPRHELLQFAAQ
                     LGSDVPFFVTGAPLALAWNRGERMIRLPPLPPHQALLVIPEVPIATADAFRWVDQTAQ
                     PSGRKGAVALDLAALSTWGDIGRMAGNDFESPVFGRYGQIRDAFEALVGTRPLVCRMS
                     GSGSTLFAIYRSERDRDDAQMMLGRKHGRVLAVETVASAAPMPEPEPGVSLPPGS"
     gene            complement(657..>1015)
                     /locus_tag="VFD73_13455"
     CDS             complement(657..>1015)
                     /locus_tag="VFD73_13455"
                     /inference="COORDINATES: protein motif:HMM:NF020683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="galactose oxidase early set domain-containing
                     protein"
                     /protein_id="HZI75004.1"
                     /translation="GPGLPRELNAELFSPPYLFWGDRPVITSSPDAIGYAEDFSVVTP
                     DAARVTRATLVRLGSVTHGFDESQRVIELGFRRIAGGLTVTAPASGAVAPPGPYMIAL
                     INSAGVPSIARMLLLR"
BASE COUNT          189 a          327 c          323 g          176 t
ORIGIN      
        1 gctggaaaaa cggattccct ctcgcgccgg cctgggcgga ggatcgagcg acgccgccgc
       61 cacgctgcat gccgtcgacg ccctcgccgg caatgtggtg ccccgacacg agctccttca
      121 gttcgccgcc cagctcggca gcgacgtccc atttttcgtg actggtgcgc cgctggcact
      181 cgcctggaat cggggcgagc ggatgattcg gcttcctccg ctcccgccac atcaggcact
      241 gctggtcatc ccagaggttc ccattgccac tgcggatgct tttcggtggg tggaccagac
      301 cgcccaacca tccggcagaa agggtgccgt cgcgttggat ctggcggcac tctcaacctg
      361 gggagacata ggacggatgg caggaaacga cttcgaatcg ccggtctttg gccgctacgg
      421 gcagatcaga gatgcgttcg aggcgttggt cgggacccgg cccctggtgt gccgaatgtc
      481 aggatcggga tcaaccttgt tcgctatcta tcgctcggaa cgggatcggg acgatgctca
      541 aatgatgctg ggccgcaagc acggacgagt tctggcggta gagactgtag cttcggcggc
      601 gccgatgccg gagccggaac caggcgtgtc gctgccgcca ggctcgtgaa gcgcgatcaa
      661 cgcagtagaa gcatccgcgc gatcgacggc acgccggcac tgttgatcag cgcaatcata
      721 tacggtccag gaggggcaac tgcgccggag gcaggcgccg tgactgtaag tcccccggca
      781 atccgacgga acccgagttc gatcacacgc tgactctcgt caaacccgtg cgtcaccgaa
      841 ccgagccgaa ccagcgtcgc tcgggtgacc cgcgcggcat caggagttac tacgctgaag
      901 tcctcggcat accctatcgc atccgggcta ctcgtgatca ctggccgatc tccccagaat
      961 agatacggcg gcgagaacag ctcggcattg agctctcggg gcagccccgg accat
//
LOCUS       DASRPQ010001180         1226 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2331327, whole genome shotgun sequence.
ACCESSION   DASRPQ010001180 DASRPQ010000000
VERSION     DASRPQ010001180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1226
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2331327"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..229)
                     /locus_tag="VFD73_13460"
     CDS             complement(<1..229)
                     /locus_tag="VFD73_13460"
                     /inference="COORDINATES: protein motif:HMM:NF014715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005536 - glucose binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0051156 - glucose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HZI75005.1"
                     /translation="MTSSLDASRGSSAAATARSRQSGLLLAGDIGGTKTALGVYSAEG
                     GARAPLIESEFPSTKYASLGDIVREFLAATGY"
     gene            393..>1226
                     /locus_tag="VFD73_13465"
     CDS             393..>1226
                     /locus_tag="VFD73_13465"
                     /inference="COORDINATES: protein motif:HMM:TIGR02913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75006.1"
                     /translation="MRTIPCAILIAAAYGCSNESQVTAPHQQSAVTSATAQYQVVKLP
                     SIPGGTQARGMAINRQGWVAGWSNQADGSRRAVLWKNGVLTDLNTLGGPSSTVPWPGL
                     NDAGTVVGISQTGASDPLHEDWSCELGGFLPESTDLICRGFVWQDGVLRDLPPLGGNH
                     SFGTGINNSGQVVGWAETAVHDPTCTDAQVLQFRAALWDPKDGSNGKIKVRELRPLPG
                     DSASAATAINDLGQAVGISGKCDQAVGRFSALHSVLWGKNRKPSEIPDLGGLTWHTPM
                     DI"
BASE COUNT          225 a          404 c          408 g          189 t
ORIGIN      
        1 cgtaccccgt cgcggccagg aactcacgga caatgtcgcc cagagaggcg tacttggtac
       61 tggggaactc cgactcgatc agcggcgcac gagctccccc ctcggcagaa tacacgccga
      121 gcgcggtctt ggtcccaccg atgtcgccgg cgaggagcag gccggattgg cgcgaccggg
      181 cggtggcggc ggcggaggag ccgcggctgg cgtccagcga ggaagtcacc ctgggaatgt
      241 agccccgaaa agggccggct gtccgcccga ttccacgtcc gattccggcg agcgtcgacc
      301 ttcaataatt ccgggtccga atgcggcgag cacccgcagc atgccgcgtt agcgtgggag
      361 agatactgat cactcgcctc ccggaggacc cgatgagaac aattccgtgc gccatcctga
      421 tcgccgccgc gtacggctgc agcaacgaat cgcaggtcac agccccgcac cagcagtccg
      481 cagtcacctc ggccaccgct cagtaccagg tggtgaagct tccctcgatt ccaggcggca
      541 cccaggcgcg ggggatggcc atcaaccgcc agggctgggt tgcgggttgg tccaaccagg
      601 cggacggttc ccgtcgcgcg gtcctctgga agaatggagt gctcaccgac ctgaacaccc
      661 tgggtggtcc cagcagcacc gtgccctggc ccgggctgaa tgacgcgggc accgtcgtag
      721 gcatctccca gaccggcgcg tccgatccgc tgcacgagga ctggagctgc gagctgggtg
      781 gattccttcc agagtcaacc gatctcatct gccgtgggtt cgtgtggcag gacggcgtgc
      841 ttcgtgacct ccctccacta ggcgggaatc acagctttgg gaccggcatc aacaactcgg
      901 gccaggtggt gggatgggcc gagaccgcgg tgcacgatcc cacctgcacc gacgcgcagg
      961 tccttcagtt ccgggccgcg ctgtgggacc cgaaagacgg aagcaacgga aagatcaagg
     1021 tgcgtgagct ccggccccta ccgggcgact ctgcgtcggc ggcgacagcg atcaacgatc
     1081 tgggccaggc ggtcggcatc tccgggaaat gcgatcaggc agtgggccgc ttcagcgcgc
     1141 tgcactctgt tctctgggga aagaacagga agccgagtga aatccccgat ctcggcgggc
     1201 tcacctggca cactccgatg gacatc
//
LOCUS       DASRPQ010001181         1375 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3597087, whole genome shotgun sequence.
ACCESSION   DASRPQ010001181 DASRPQ010000000
VERSION     DASRPQ010001181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1375
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3597087"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VFD73_13470"
     CDS             complement(<1..280)
                     /locus_tag="VFD73_13470"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HZI75007.1"
                     /translation="MSRIVRCSLIQAANCAPPDATLEATKKSMVDRHVEYIAQAAAAG
                     AQICCLQEIFYGPYFCAEQTTRWYDFTEPIPNGPTVRLMQHLAREHHMA"
     gene            complement(403..>1375)
                     /locus_tag="VFD73_13475"
     CDS             complement(403..>1375)
                     /locus_tag="VFD73_13475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="TadG family pilus assembly protein"
                     /protein_id="HZI75008.1"
                     /translation="AVTVNRPPQGGYYMSDPTAVEVVVTQNAPTFFMQVLGFTSMRVT
                     ARAVARQGPGSNCVYSLNPTANKALWQTGSGEFVSPCGIYVNSSDSKAFYFSGSGSIE
                     AEIDIVGSYYQGGSGSVSPAPISGVPRPPVIDPLASRALPSIPGNCDYNNRSVSGIVT
                     LDPGVYCGGLSITGSGAITFNPGLYIINGGGLSVSGSGSVSGTGVTIYDTADGSHTYK
                     GIQISGSGEITLSAPSSGPYESLLLIGDRTRASSLGSSVTGSGNLHIDGVIYLPREEL
                     AFAGSSGSRYQVLIADTLKITGSAQLNNDYSGLSSGAPIRGSGVVSE"
BASE COUNT          263 a          406 c          437 g          269 t
ORIGIN      
        1 gcgccatgtg gtgctcgcgg gcgaggtgct gcatcaggcg aaccgtcggg ccgttgggga
       61 tcggttcggt gaagtcgtac cagcgggtgg tctgctccgc gcagaagtac ggaccgtaga
      121 aaatttcctg gagacagcag atctgggctc ccgcggcggc cgcctgggca atgtactcca
      181 catgccggtc caccatcgat ttcttggtgg cttcgagcgt ggcatccggt ggagcgcaat
      241 tggctgcctg aatgagtgag caccgtacga tccgggacat gctaacctcc gcgccgccag
      301 ggaacactcc acccgtccgg tctggcgacc gcccaaatgg cgaattggac aattatctgc
      361 ccgaggaggc gggggatgca agttgcctga tgcagcggct ggttattcgc taaccacgcc
      421 ggagccgcgg atgggcgcgc cgctcgaaag accgctgtag tcattgttga gctgtgcgct
      481 gccggtgatc ttcaacgtat cggcgatcag gacctggtag cgggatccgc tgcttccggc
      541 gaaggcaagc tcctcccgcg gaagatagat gactccgtct atgtgcaggt tccccgaacc
      601 ggtgaccgaa cttccgaggc tggaggctct ggtccggtca ccgatcagca gtagagactc
      661 gtaagggcct gaagaaggcg cggaaagtgt gatttcgccg ctgccgctga tctggattcc
      721 tttgtacgtg tggcttccgt cggcagtgtc atagatcgtg accccggttc cgctcacgct
      781 tcccgacccg gatacactca gtccgccgcc gttgatgata tacaggcccg ggttgaaggt
      841 aatcgccccg ctgccagtaa tcgacagacc cccgcagtag acgccgggat caagggttac
      901 gatgccgctg acggaccggt tgttatagtc gcagttgccg ggaatggacg gcagcgccct
      961 gctcgcgaga ggatcgatga ccggcggacg gggcacaccg ctaatgggcg ctggcgagac
     1021 ggagccgctc ccaccctgat agtaggaccc gacgatgtcg atttctgcct caatcgatcc
     1081 gctcccggaa aagtagaacg ccttcgagtc gctggaattg acatagattc cgcaaggaga
     1141 tacgaactct cccgatcccg tttgccacag agccttattg gcggttggat tgagggaata
     1201 gacgcaattg cttcctggtc cctgtcgcgc gactgcccgc gccgtcaccc tcatcgaggt
     1261 aaagcccaac acctgcatga agaatgtcgg agcattttgg gtgacgacaa cctcgaccgc
     1321 cgtcgggtcg gacatgtagt atccgccctg cggcggacgg ttgaccgtga cggcc
//
LOCUS       DASRPQ010001182         1044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2034992, whole genome shotgun sequence.
ACCESSION   DASRPQ010001182 DASRPQ010000000
VERSION     DASRPQ010001182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2034992"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..>1044)
                     /locus_tag="VFD73_13480"
     CDS             complement(114..>1044)
                     /locus_tag="VFD73_13480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75009.1"
                     /translation="TAFYKQTRDALIQREIVPSLGTTTTQFFNLGKVSNRGVELRLDT
                     RIIDKPNFAWDLTFTGSATKNNLDDLGEGVEPITLGFIQRHVEGYPLGGIWDRPILSY
                     NDANGNGVIEPAVYDDAGNVVVPAEYTVGDTAVYRGSAIPTREFGLRSNFSFFRNLFS
                     LGALFDYRGGNWIENGTDSFRCGGGVIYCRALIDPTASLKDQAAAAAYTYGDPNGFTE
                     WGFFEPAWFIKLRELSLTFNAPDHIARMLGASRASLTLSGRNLFTIDDYSGIDPEVNG
                     FGQGREGGSNFAATDFFSQPQVRYWVARLNLGF"
BASE COUNT          215 a          313 c          321 g          195 t
ORIGIN      
        1 ggcggattgg tatccagaat tccgcatgcc gacacaccgg tcagcagcag gatgaccgcc
       61 ggagcaaggg accggcgagc gaagtatcgc tgatacatgg ctatcgtctc cggtcagaag
      121 ccaaggttga gtcgtgccac ccagtagcga acctggggct gggagaagaa atccgtcgcg
      181 gcgaagttgc tgccaccctc ccggccttgg ccgaagccgt tgacctcggg gtcgattccg
      241 ctgtagtcgt cgatggtgaa gagattgcgt ccactaaggg tgaggctggc gcggctggcg
      301 ccaagcatcc tggcaatgtg gtccggagcg ttgaaggtga gtgacagctc ccgcagcttg
      361 atgaaccagg ccggctcgaa gaagccccac tcggtaaagc cgttcggatc tccataggta
      421 tacgccgccg ctgcagcctg gtccttgagc gaggcagtcg gatcgatcaa ggcccggcag
      481 taaatgacgc cgccaccgca gcggaacgaa tcagttccgt tctcgatcca gttcccgccc
      541 cgataatcaa acagcgcgcc gaggctgaac agattgcgga agaacgagaa gttgctcctc
      601 aacccgaact cacgggtggg aatggccgag ccccgataga ctgccgtgtc tccaacggtg
      661 tactcggccg ggacaaccac gttccccgcg tcgtcgtaca ccgcgggctc gatgaccccg
      721 ttgccgttcg catcgttata cgagagaatc ggccggtccc agatcccgcc cagtgggtag
      781 ccctccacgt ggcgctggat gaaccccagc gtaatgggct ccaccccctc acccaggtcg
      841 tccaggttgt tcttggtggc cgagccggtg aaggtcaggt cccaggcaaa gttcggctta
      901 tcgatgattc gggtatccag cctcagctcg actcctcggt tggaaacctt gcccagatta
      961 aagaattgag tagtcgtagt tcccaacgaa ggcacgatct cacgctggat cagtgcgtca
     1021 cgggtttgct tgtagaaggc ggtc
//
LOCUS       DASRPQ010001183         2150 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2035327, whole genome shotgun sequence.
ACCESSION   DASRPQ010001183 DASRPQ010000000
VERSION     DASRPQ010001183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2150
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2035327"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..297)
                     /locus_tag="VFD73_13485"
     CDS             complement(<1..297)
                     /locus_tag="VFD73_13485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3052 domain-containing protein"
                     /protein_id="HZI75010.1"
                     /translation="MAGYSTRGLTEKLGIKQGTRVIALGAPAEYPELLAPLPEDVTIQ
                     KRLSSPARFVHRFVRTRKELAAEFPRLAAALDDEGTLWISWPKISSGVETDLTEN"
     gene            complement(300..1406)
                     /locus_tag="VFD73_13490"
     CDS             complement(300..1406)
                     /locus_tag="VFD73_13490"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF013345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HZI75011.1"
                     /translation="MDAVTVETPIPLVDLDRLDRNLERMANYASQHRVSLRPHSKTHK
                     SQRIAAEQIRRGAVGLTCATILEMEVMAEASTDLLLAYPAVGEAKLQRLLSLPDEIAI
                     TVMLDSHEAAEQLATAARKRGREVGVLIELDAGMHRVGLSGLDAAVDLARTVSRLSPL
                     VYRGIGFYPGHLRTSARERPGLEQMANFLRGAVTTLERSGVRPEVVSGGSTPLAWQTH
                     EFPEITEMRPGTYVYNDRTTHQVGACEWNDCALTVLATVVSTAVPGQAVIDAGSKSLG
                     REPPEGQGSGFGALLDRPEVVVTRLSEEHGILDLRDTDWRPSVGDQVRVVPNHACIAV
                     CLHEMIYGIRGNRWETSWPVTARGRRPLRQSVGV"
     gene            1545..>2150
                     /locus_tag="VFD73_13495"
     CDS             1545..>2150
                     /locus_tag="VFD73_13495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75012.1"
                     /translation="MKLPEPGKLVRLALLGVALACGHTEPFGSQGYDTDQPFDPTPPL
                     RLTLNRGPDRGPAWLPDGTGILYSTQLSDARDKDVCLALLPPTGGRQRALTCTLSTTG
                     AQLREAIESAAPDSAGQLAFIAASSEPSAVLPQSQSLVLGTVDRPGEYQPLLGLPYTS
                     ASGRLATGISQLHWSGKGRLVFLAEQVSTRLPCNGCELDTIR"
BASE COUNT          379 a          716 c          654 g          401 t
ORIGIN      
        1 gttctccgtc aagtcggtct ccacgccgga actgattttt ggccaggaaa tccaaagagt
       61 cccttcgtca tccaacgccg cggcaagtcg agggaattcc gcggccaact cctttcttgt
      121 ccggacgaag cgatggacaa agcgggcggg agacgagagg cgcttctgaa tcgtgacgtc
      181 ctccggcagc ggggcaagca actccgggta ctctgctggt gcgccaagcg cgatgactcg
      241 ggtgccctgc ttgatcccca gcttttctgt gaggccacgg gtggaataac cggccatagc
      301 tagacgccga cgctctgtct cagggggcgg cggccccgag ccgtaaccgg ccagctggtt
      361 tcccagcggt taccccgaat tccgtagatc atctcgtgta ggcacaccgc gatgcaggca
      421 tgattgggca ccacccgaac ctgatcgccg acggaaggcc gccagtccgt gtcccggaga
      481 tccaggatcc cgtgctcttc cgagagccgg gtgaccacca cttcgggccg atccagaagc
      541 gcgccaaagc cactgccctg cccttcaggt ggctcccggc cgagcgactt gctgcccgca
      601 tcgataaccg cctggcccgg taccgccgtg ctcaccaccg tcgcgagcac tgtcagcgcg
      661 cagtcgttcc actcacacgc tccaacctgg tgggtggtcc tgtcgttgta gacataggtc
      721 ccgggtcgca tctcggtgat ttcgggaaac tcgtgggtct gccaggccag aggcgtcgag
      781 ccaccgctca ccacctccgg cctgactccg gatcgctcca acgtggtgac cgcgccgcgg
      841 agaaaattcg ccatttgttc cagccccggc cgctcacggg ccgacgtccg cagatgaccg
      901 ggatagaagc cgatcccacg gtatacgagg ggagagaggc ggctgaccgt ccgggccaaa
      961 tccaccgctg catccagccc cgagagtccg acccgatgca tgccggcatc cagctcgatc
     1021 aggacgccca cctcgcgacc tcgcttccgc gcggcagtgg cgagctgctc ggctgcttcg
     1081 tgggagtcca gcatgacggt aatggcaatc tcatccggga gcgacaggag ccgttgcagc
     1141 tttgcttctc ccactgcggg atacgccagc agcaggtcgg tcgatgcctc ggccatcacc
     1201 tccatttcca ggatcgtggc gcaggtcaac ccgactgctc cccggcggat ctgctcggcg
     1261 gcaattcgct gcgatttgtg agtcttgctg tggggccgga gtgacacgcg atgctgcgac
     1321 gcgtagttgg ccatccgctc gaggtttcgg tcgagccggt cgaggtcgac cagtggaatg
     1381 ggtgtttcaa ccgtcacagc atccatgatt taccgttccc ggtgaaagat gcaagcgtcg
     1441 actgaccgag ccgcatacct tgtgtgcgca gggatccggt cgttacgtcc ccattacgat
     1501 acactcaccg gtttgacaca ccgatgacat gtcccgaggt gctgatgaag ctcccggagc
     1561 caggaaagtt ggtgcgtctc gccctgctcg gtgttgctct ggcctgcggg cataccgagc
     1621 cgttcggctc tcagggctac gacaccgatc agccgttcga tccaacccct ccattgcgcc
     1681 tcactctcaa ccggggcccc gaccgaggtc ccgcctggtt gccggacggc acgggcattc
     1741 tctactcgac tcaactctct gatgcgcgcg acaaggatgt atgcctggcg ctccttccgc
     1801 caactggagg tcgacagcgc gcgctcacct gcacgctctc gaccacggga gcccagctga
     1861 gggaggcgat cgaatctgcc gcgcccgata gtgccggcca gctggcgttc attgccgcca
     1921 gttcggagcc gagtgccgtg ttaccgcagt cccagagtct ggtgctggga actgtggatc
     1981 gcccaggcga gtaccaacct ctgctcgggc tgccatacac cagtgcaagc ggccgactgg
     2041 ccactggaat atcgcagctt cactggagcg gcaaaggacg actggtgttc ctggccgagc
     2101 aggtcagcac tcgcctcccg tgcaatgggt gtgagctgga cactattcgc
//
LOCUS       DASRPQ010001184         1742 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_768235, whole genome shotgun sequence.
ACCESSION   DASRPQ010001184 DASRPQ010000000
VERSION     DASRPQ010001184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1742
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_768235"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..471)
                     /locus_tag="VFD73_13500"
     CDS             complement(<1..471)
                     /locus_tag="VFD73_13500"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HZI75013.1"
                     /translation="MAERHAVWIEGGTFLMGSDDFYPEERPVHRARVDGFWMDTDPVT
                     AADFGRFVEATGYVTVAERPPDPAAYPDVVPSLLVPGSLVFRRPSHRVPLRDYRQWWA
                     YVPGACWHRPEGPESSLDGRENHPVTHIAFEDAEAYARWAGKTLPTEAEWEYAAR"
     gene            complement(484..930)
                     /locus_tag="VFD73_13505"
     CDS             complement(484..930)
                     /locus_tag="VFD73_13505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75014.1"
                     /translation="MADSPFDDPTQGGAQDDLETAEYPTNHVVGVLDTSEQTACALDA
                     LVSGGFLESEVQLMKPDEIDRLAAGTGRRGIQHWFIRVTGSLGLKNAETEMKERYEHA
                     LREGGTLVTVLAPTEDRKDLAAQLLQQCGGHFINFFGRLNVERIAG"
     gene            complement(1168..1434)
                     /locus_tag="VFD73_13510"
     CDS             complement(1168..1434)
                     /locus_tag="VFD73_13510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75015.1"
                     /translation="MAESDQRLRPHPNDRLAGPVVPLNFADLARALRAEPHQAKGGHR
                     QAGLIHRGHVRLLLFTFEAGGHLPEHRAPGHVVIHCPTLGAPSP"
     gene            complement(1427..>1742)
                     /locus_tag="VFD73_13515"
     CDS             complement(1427..>1742)
                     /locus_tag="VFD73_13515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75016.1"
                     /translation="LRPEGDPKNLRDDYTAFSFAAIGYVMLNTTALVLEDKEVADLAA
                     QHLQNYVTGMIALHYIIPAVVMRSLQDEAYPTRENVLTDVFRNVEKAWALGRTLQIQS
                     RG"
BASE COUNT          321 a          551 c          567 g          303 t
ORIGIN      
        1 gcgcgcggcg tattcccact cggcttcggt cggcagcgtt ttgccggccc accgggcgta
       61 tgcctccgcg tcctcgaacg cgatgtgcgt caccggatgg ttctcgcgtc cgtcgagtga
      121 actctccgga ccctcgggcc ggtgccagca ggcgccgggg acgtaggccc accattgtcg
      181 gtaatctcgg agcggaacgc ggtgagaggg gcggcggaag acgagcgagc cgggcaccag
      241 gagggaaggc acgacatcgg gataggcagc aggatcgggg gggcgctcgg ccaccgtcac
      301 atagcccgtc gcctccacga atcgcccgaa atcagcggcg gtgacggggt cggtgtccat
      361 ccagaaaccg tccacccgag cgcggtggac cggacgctcc tcgggataga agtcgtccga
      421 gcccatgagg aaggtgccgc cctcgatcca gaccgcgtgc cgttccgcca tgccctgagt
      481 tgctcagccg gcaatccgct ccacgttgag ccgaccgaag aagttgatga agtgaccacc
      541 acattgctgc agaagttgcg cagccagatc tttccggtct tctgtcgggg cgaggacggt
      601 tacgagagtc ccgccctccc gcagcgcatg ctcatagcgt tctttcatct ccgtctcggc
      661 gttcttcagt cccaggcttc cggtcacgcg gatgaaccag tgctgaatgc cccgacgccc
      721 ggtccccgcg gccagacgat cgatctcgtc aggtttcatc aactgaactt cggattcgag
      781 aaacccaccg ctgaccagcg catccagcgc gcaggccgtc tgctccgaag tatccaggac
      841 accgaccacg tgattggtgg ggtactcggc ggtctccagg tcgtcttgag cgccaccttg
      901 agtgggatca tcaaatggag agtctgccac agcgcctcca gtaggttcgg accaaaactg
      961 aaggtgtcac tcgaaggcca caaacggaag gtttgagctg agggaaagct cgcgcagtga
     1021 gggcgctttc cataccgtcg gtcacgcggt ggacggtcgg ctatgcaggc cgctccggtg
     1081 ctggctgcaa cctgcgagac cacccccgcg ctcccgcgaa gtggattccc cgggagccta
     1141 aacgcgcagc accggatgtg ttgccggtca gggtgaggga gcaccaaggg ttggacagtg
     1201 aatcacgacg tgaccggggg cgcgatgttc cggcaggtgc ccgccggctt cgaaggtgaa
     1261 gagcaggagc cggacgtggc cccgatgaat cagcccagcc tgccgatggc cgcctttggc
     1321 ctggtggggc tcagcccgca gcgcgcgcgc aagatcggca aagttgagcg gcaccaccgg
     1381 cccggccagg cgatcgttcg gatggggccg aagccgctgg tcggattcag ccacgcgact
     1441 ggatctgcaa ggttctgccg agcgcccagg ccttctccac gttccgaaac acgtccgtga
     1501 gaacgttttc gcgagtcggg tacgcctcgt cctgaagcga ccgcatcacc accgccggga
     1561 tgatgtaatg caacgcgatc atccccgtga cgtaattctg cagatgctgg gctgcgagat
     1621 cggctacttc cttgtcttcc agcacgagcg ccgtcgtgtt cagcatgaca tagccgatgg
     1681 ccgcaaagct gaacgcggtg taatcatcac ggaggttctt ggggtcacct tctggacgga
     1741 gg
//
LOCUS       DASRPQ010001185         1032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3597974, whole genome shotgun sequence.
ACCESSION   DASRPQ010001185 DASRPQ010000000
VERSION     DASRPQ010001185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3597974"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1032)
                     /locus_tag="VFD73_13520"
     CDS             complement(<1..>1032)
                     /locus_tag="VFD73_13520"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HZI75017.1"
                     /translation="PTGILWGTDKAYSVESEGQLNNAADFGALVVAYRDAAPVRLRDL
                     GRVVDSIQDTKRASWFNGQRAVVLAVQRQPGTNTVAVAQRVKAEVEQLRPQIPPAINI
                     ATLNDRSLTVKASVTDVKFTLFLALCLVVMVIFLFLRNLRATTIPSLALPMSLVGTFA
                     VMYLLGYSLDNLSLMALTLAVGFVVDDAIVVLENIVRHIEAGEPVLQAAINGSREISF
                     TVLSMTLSLVAVFIPVLFLGGLIGRLFQEFAVTIGVAILMSGFVSLTLTPMLCSRWLR
                     PHPQNERHGRLYTLIERAWEKSHAFYQRSLYWTMDHRPLVMAFGGVIAVGTIVLGRVV
                     PKGFIPSEDQ"
BASE COUNT          205 a          345 c          318 g          164 t
ORIGIN      
        1 ctggtcttcg ctcgggatga agcctttggg caccacccgg ccgagcacga tggtaccgac
       61 cgcaatcaca ccaccaaagg ccatgaccag cggacggtga tccatggtcc agtaaaggct
      121 tcgctgatag aacgcgtgag acttctccca ggcgcgctcg atcagggtgt acaatcggcc
      181 atggcgctcg ttctgcgggt gcggccgaag ccaccggctg cacagcatcg gcgtcagggt
      241 gagcgacaca aaccccgaca tcaggatcgc gacgccgatg gtgaccgcaa actcctggaa
      301 cagccgtccg atgagtccgc ccaggaagag caccgggatg aacaccgcca ccagcgacag
      361 cgtcatcgag agcacggtaa agctgatttc ccggcttccg ttgattgccg cctggagcac
      421 cggctcgccg gcctcgatat ggcgcacgat gttttccaga accacgatgg catcgtccac
      481 cacgaacccg acggccagcg tgagcgccat cagcgagaga ttgtccagac tgtagcccag
      541 caggtacatg acggcgaacg tccccaccag ggacatcggc agtgccaggc tcgggatcgt
      601 cgtcgcccgc aaattccgca ggaacaggaa gatcaccatc accaccaggc aaagcgcgag
      661 gaagagggtg aacttcacgt cggtcaccga tgccttgacc gtgagggagc ggtcattcag
      721 cgtcgcgata ttgatcgccg gcgggatctg cgggcgcagc tgctcgacct ccgctttcac
      781 ccgctgggcc accgcgacgg tattggtccc gggctgccgc tgcaccgcca gcaccaccgc
      841 acgctggccg ttgaaccagc tggcccgttt ggtgtcctgg atgctgtcga ccactcggcc
      901 cagatcgcgc aaccggaccg gggctgcatc ccggtaggcc accaccaggg cgccgaagtc
      961 cgccgcgttg ttgagctggc cctcactctc gaccgagtag gccttgtcgg tgccccagag
     1021 gattccggtg gg
//
LOCUS       DASRPQ010001186         1222 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_768270, whole genome shotgun sequence.
ACCESSION   DASRPQ010001186 DASRPQ010000000
VERSION     DASRPQ010001186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1222
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_768270"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1161)
                     /locus_tag="VFD73_13525"
     CDS             complement(<1..1161)
                     /locus_tag="VFD73_13525"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI75018.1"
                     /translation="MPRNGFQLAKRSLQFVRPYLRPLTGVICLALVLAALSAVDPLIM
                     KYLFDELGLRTGPRTLAMIMGGLVCLELTRASLQAWLGILSWDVRLGVEYTLREQLVS
                     KLNSLPISFHQREGVGGTMNRVNQGISGYVAAFSDVAFNLLPTLLYLVLSVLAMLRME
                     PRLALAVIVFTPLPALIGARAAPEQMRRERRLVERWSSIYSRFNEVLAGIMTVKGYVM
                     EEEEKRRFLQGVRDGNEIVRRGVRTDNWTGTLRTSAATTARLAALALGGYLALQGEIT
                     VGTLVAFLGYIGGLFGPVQGLTNAYQTFRRVSVSLDTIYNILDADDVVGDAPGASAVN
                     HLKGEVEFRNVSFGYQPGSAVLRNINLTARPGETIALVGPSGSGKTTLATLLQ"
BASE COUNT          233 a          394 c          376 g          219 t
ORIGIN      
        1 ctgcagcaat gtggccagcg tggtctttcc gctgccgctc ggtcccacca gggcaatcgt
       61 ctcccccggc cgggccgtga ggttgatgtt tctgagcacc gccgaccccg gttgataccc
      121 gaagctcacg ttgcggaact ccacctctcc tttcaggtgg ttcaccgcgg aggcacccgg
      181 ggcgtcgccg acgacgtcat cggcgtcgag gatgttgtag atggtatcca gcgatacact
      241 gacccgccga aatgtctggt acgcgttggt caggccctgg accggtccga aaagaccgcc
      301 gatgtatccc aggaaagcca ccaacgtccc aacggtgatc tcaccctgca gcgcgagata
      361 tcctcccagc gccagggctg ccaggcgggc tgtggtcgcc gcggacgttc ggagggttcc
      421 ggtccagttg tccgtgcgca ccccgcggcg cactatttcg ttcccatcac gcaccccctg
      481 caggaaccgt cgcttttcct cttcttccat cacgtagccc ttcaccgtca tgattccggc
      541 aaggacctcg ttgaaacggg agtagatcga gctccagcgc tccaccaggc gtcgttcgcg
      601 gcgcatctgc tccggtgccg cgcgggctcc gatcaatgca ggcagcggtg tgaacacgat
      661 caccgccagg gcgagcctcg gttccatccg cagcatcgcg agcactgaga gcaccagata
      721 gagcagggta ggaagcagat tgaacgcgac gtcgctgaac gcggcgacgt acccgctgat
      781 tccctgattc acccggttca ttgtgccccc gaccccctcg cgctgatgaa aggagatcgg
      841 gagggaattg agcttgctga ctagctgctc gcgaagggtg tactccaccc cgagacgcac
      901 gtcccagctc agaattccca accaggcctg cagactggcc cgggtcagct ccagacagac
      961 tagtccgccc atgatcattg ccagggtgcg gggtccggtg cgaagtccca gctcgtcgaa
     1021 gagatatttc atgatgaggg ggtctaccgc actgagcgca gccagaacca atgcaaggca
     1081 gatgaccccg gtcaggggac ggagatacgg ccggacgaat tgaagcgacc gcttggcgag
     1141 ctgaaaaccg tttcgtggca tcggggcagg gatggagtcg agtcgctcca aggcaagttc
     1201 ggtgccctgc gagggacccg gg
//
LOCUS       DASRPQ010001187         9766 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1399584, whole genome shotgun sequence.
ACCESSION   DASRPQ010001187 DASRPQ010000000
VERSION     DASRPQ010001187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9766
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1399584"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..969)
                     /locus_tag="VFD73_13530"
     CDS             complement(<1..969)
                     /locus_tag="VFD73_13530"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HZI75019.1"
                     /translation="MTSAASVSSKARKTKTTPYQMYIGGQFVEGAKGRSFEVFDPATE
                     DAIATCPAGDASDVDRAVQAARTAFYEGWRNVTAQERGRILFRLAERIRARRAELAEL
                     ETRNSGKPIVESEYDMDDTATCFEYYGGLATKINGEVLPVPAEAVAFAMREPVGVAGQ
                     IIPWNYPLLMAAWKIAPAIAAGCTVVLKPAEQTPLSILALARDFEAIGLPPGVVNIVT
                     GDGPSAGAPLVGHPEVRKIAFTGSAEVGKIIMRTAADQLKRVSLELGGKSPNIFFSDA
                     DFENAVDGALFGTFINQGEVCSAGSRVLVQRDIYQKFIEAASAKART"
     gene            complement(1045..2283)
                     /locus_tag="VFD73_13535"
     CDS             complement(1045..2283)
                     /locus_tag="VFD73_13535"
                     /inference="COORDINATES: protein motif:HMM:NF027964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HZI75020.1"
                     /translation="MRVLLVGAGAVGTVSALKFAKEAVLEKLVIADTVSARASLLADR
                     LNDRKVSAVSLDAGDRAAVAAAIRQTAATLVLNAALPATNMAIMRACLQEGCDYIDLA
                     SAGTDADGIPKMEDQFALDAQFKAAGRLALLGMGADPGTTNVYAAYAGKHLLDSVTEL
                     KIRDGDNSVCHGHDGFVAAFSPWVMIDECLCKAVAYRNGRYVLEEPLSGAEPFDFPEL
                     GILNCYSVDHEECKTLPRSFPQARTIDFKLCMDDSTVETLRVIKRLGLSSKTRVRVGS
                     VSIAPRDLVVSLLPEPKDLAGRMRGKSCVGTLARGFRKGEPKAYYIYNVTDHEAAYRE
                     LGVQGTAYQTGIPPVIAARLIDQGIWQGTGVMAPEQFDPDPFLQCLASEGMPWFVRDE
                     SVQAGTSRAAGRSSRETVAA"
     gene            2729..4078
                     /gene="gabT"
                     /locus_tag="VFD73_13540"
     CDS             2729..4078
                     /gene="gabT"
                     /locus_tag="VFD73_13540"
                     /EC_number="2.6.1.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR00700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003867 - 4-aminobutyrate transaminase
                     activity [Evidence IEA];
                     GO_process: GO:0009450 - gamma-aminobutyric acid catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-aminobutyrate--2-oxoglutarate transaminase"
                     /protein_id="HZI75021.1"
                     /translation="MPGVIRLQTEIPGPKSRRLLARRAQAVPRGVPAVTPIAVIHAEG
                     ALITDADGNRLIDFAGGIGVVNTGHRHPSVVAAVREQLDRYAHVCFPVSTYEPYVELA
                     ERLNQITPGDHPKRTFLLNSGAEAIENAVKVARHYTGRAAVVCFEHAFHGRTNLAMAL
                     TSKVMPYKKGFGPFAPEVYRIPYPYCYRCAARQRSSGSGGRCCMASRESLDQIFASLV
                     DPDSVAAVVMELELGEGGFVPAPREYVEALAEFTRQHGILFIADEIQSGFGRTGKVFA
                     CEHFNLVPDIIVTAKSLAGGLPLAAVTGRAEVLESAQVGGLGGTYGGNPLACAAALAV
                     LDAMEKEDLPRLAAGLGERVRSRFCQMATKFSCIGDVRGLGAMIGMELVTDRETKIPD
                     KALTARVLAAALERGLILLSSGTYGNVIRVLAPLTTPAEVVDEGLSVLERALEAAVS"
     gene            4075..5196
                     /locus_tag="VFD73_13545"
     CDS             4075..5196
                     /locus_tag="VFD73_13545"
                     /inference="COORDINATES: protein motif:HMM:TIGR01187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI75022.1"
                     /translation="MTGSPLGDPVVQLLGVSKTFGGVKAVDNVSLDIHAGEFFSLLGP
                     SGCGKTTTLRLLAGLEQPDAGGQVRLLGETVNQKPPYERKLSMVFQNYALFPHLTVAR
                     NVAFGLERRKTPRPEIADRIRRVLTMVRLEPDVFADRMPSQLSGGQRQRVALARALVL
                     EPAILLLDEPLGAIDLKLRKEMQLELKALNRQLGTTFVYVTHDQEEALTMSDRIAVME
                     RARVAQVGTPAEIYENPRTAFVAKFIGESNFFEGTIQRATDGAWTVQSKDGGSFRVPN
                     HPRLQPGTSIRIAVRPEWMDVCRLDAVPPGENALRGTIRDTIYLGETMHVIVIVPQVG
                     DVTVAVRNEGQLIKPLPWRPGDPAAVAWLPEDCQILEDE"
     gene            5196..6038
                     /locus_tag="VFD73_13550"
     CDS             5196..6038
                     /locus_tag="VFD73_13550"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI75023.1"
                     /translation="MADRRGWTLLAPGAVWLLAFFVVPILIMFIYSFMARGVYGGVEP
                     GFTLQHYARFVDPLYLAVLERTFLWSIACTLICLVFGFPVAYVIVRSGRWRNLLLFLV
                     VLPFWTSFLVRTFAMIFLMRDTGLINSWLLKLGVIGQPLTMLYTPFAVMAGLVYGFLP
                     FMILPIYASLEKLDWSLLEAAEVLGARPAARFVRVTLPLTMPGVVAGALLVFVPALGS
                     FLTADLLGGAKQMMIGNLVQNQFSSARNWPFGSAASFIVMALVLAAVMLYLRVRDQGQ
                     PGSR"
     gene            6040..6813
                     /locus_tag="VFD73_13555"
     CDS             6040..6813
                     /locus_tag="VFD73_13555"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI75024.1"
                     /translation="MPTRLPGWLLTTAAAVYVFLHLPVLVLMIFSFNSSKFSVQWRGF
                     TLQWYHRLLDRPDILRGLRISLVVGGAATVISALLGTMMALALARHRLRGRRALEGFL
                     YLPIVTPEIVVGISLLILFALLKLPLGIMTIIIAHVAFCISFVVIVVLARLEGMDQSL
                     EEAAMILGADEITTFWKVTVPQLWPGILAGALLAFTMSFDDYVITSFVSGPGSSTLPI
                     VVYSMVRKNVEPSINAISTIILMVTALLIYGADRLIRRR"
     gene            6847..8109
                     /locus_tag="VFD73_13560"
     CDS             6847..8109
                     /locus_tag="VFD73_13560"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HZI75025.1"
                     /translation="MVENCLWTELFSPPRLPTSPLPSRTDVAIIGGGYTGLSAARCLA
                     RRGIDVTVLETHTMGWGASSRNGGFVLPGFKPDMEELERRIGSSRAASLFELSLEAIA
                     FLRDLIDQEHIACDFVRCGAVTLAAKPGHFGALQRSCRFLRERLGYDTDLLGPGELIS
                     EIGSTRYLGALLDPAGCALQPAKYVAGLAAAAAKAGARLMERTDVTRVQRVPGGFDIT
                     TSQGVVRTEQVLAATNGYTPRALQALRRRVVPIGSYQIATEPLDAGLTGRLMPRRRVF
                     SDTKNLLYYFRLSPDGRMVFGGRASFTPASPRRSAKILRAGMRDVFPELAQANIEYVW
                     SGKVAYPMDHLPHAGRHDGLHYAMGYCGHGVALATYLGMRMGEVIAGTGAPPDLGTKD
                     FRAIPFYFGAPWFLPIIGGYYRFRDWIS"
     gene            8166..9326
                     /locus_tag="VFD73_13565"
     CDS             8166..9326
                     /locus_tag="VFD73_13565"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0019808 - polyamine binding [Evidence
                     IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein"
                     /protein_id="HZI75026.1"
                     /translation="MSTNNELERLIDEWRPASMARREFVLRALALGIDLSCLGTLLAG
                     CHGETKSGSTEAAARGSQGAQADLGPLEKELHIYNWSDYIAADTVSNFEKEFGVKVTY
                     DTYESNEEMVAKLQAGASGYDIVVPSGHIVPVLVATDLITPIHRKYLPNFANISPLFQ
                     NLPTDPENRYTVPWQWGTSGIAYRTDKVSTAVDSWAIFHDARYAKKMTMMDDGREVIG
                     SQLRYRGHSLNSTDPAELAQAKADAIDAKKQLKAYISAPVKAQLISGDVWISQLWSGD
                     TAQAKVEQPNLGYVIPKEGCTIWSDSLCIPRSAPDKRAAHEWMNYILRPEVAAAISGA
                     TGYGTPNAAATKLLKTPVPYPTQEELKRLEFQVDLGKDTALWDQIWTEIKSA"
     gene            9348..>9766
                     /locus_tag="VFD73_13570"
     CDS             9348..>9766
                     /locus_tag="VFD73_13570"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HZI75027.1"
                     /translation="MRVSNDEVMQQTRRYLELIAGREMSSEEQRSFIAETVESYERYY
                     NRGFISYRKSVTEAGQFAAIEWSGQGSILRDLLGREYIDCLGGYGIFSAGVNHPTIVK
                     AVTDQIQRMALNSQELLEPWRAALAKVLAAVTPGDLQ"
BASE COUNT         1772 a         3045 c         3005 g         1944 t
ORIGIN      
        1 cgtccgggcc ttggcggaag cggcctcaat aaacttctgg tagatgtccc gctgcaccaa
       61 gacccggctg ccggcggagc acacctcgcc ctgattaatg aaggtcccaa agagggcccc
      121 gtcgacggca ttctcgaagt cggcgtcgct gaagaagatg ttgggcgact tccccccgag
      181 ttctagcgag acccgcttga gctggtcggc tgcagtccgc atgatgatct tgccgacttc
      241 cgcgctgccg gtaaacgcaa tctttcgtac ctccggatgg ccaaccagcg gcgcgccggc
      301 tgagggtcca tcgccggtca cgatgttgac cacccccggc ggaagcccga tcgcctcgaa
      361 atctcgggcc agcgccaaaa ttgagagcgg ggtctgctcg gcaggcttga gcacgacggt
      421 gcagccagcg gcgatggccg gagcgatttt ccaagccgcc atcaataacg ggtagttcca
      481 tgggatgatc tgcccggcga ctccgaccgg ctcgcgcatg gcaaaggcta ctgcttccgc
      541 cggcaccggc agcacctcgc cattgatctt cgtcgcgagt ccaccgtagt actcgaagca
      601 ggtagcggta tcgtccatgt cgtactccga ctccacaatc ggcttgcccg aattccgggt
      661 ttccagctcc gcgagttcgg cgcgcctggc ccggatccgc tccgccagcc gaaacaggat
      721 acggccccgc tcctgggcgg tgacattgcg ccagccctca tagaaggccg tgcgggcagc
      781 ctgcaccgca cgatcgacat cggaggcgtc gcctgcggga caggttgcga tggcatcctc
      841 tgtcgccgga tcgaacacct cgaagctccg acccttggcg ccctctacga actgcccacc
      901 gatgtacatc tgatacggcg tcgtcttggt tttgcgagct ttactcgaca cacttgcggc
      961 gctggtcatt gaattcctcc ccatgcgcgc tctggcgttt cgatgcggtc acatcagtag
     1021 gggcctgcac gtcgtttctt cagcctaggc ggcgacggtc tctctcgagc tccgccccgc
     1081 tgcgcgtgag gtgccggcct gcaccgactc gtctcgaacg aaccacggca ttccttccga
     1141 tgcaaggcac tgaaggaacg ggtcggggtc gaactgctct ggagccatga cccctgtccc
     1201 ctgccagatc ccctgatcga tcagtcgcgc cgcaatcacc ggcggaatac cggtctgata
     1261 tgcggtgccc tggaccccga gttcccgata cgcggcctcg tggtcggtga cattgtagat
     1321 gtagtaggcc ttgggctctc ccttccggaa tcccctggcg agtgtcccca cgcagctctt
     1381 cccccgcatc cgtccagcga ggtccttcgg ctccggaagg agagagacta ccaggtcgcg
     1441 tggcgcgatc gagacgctcc cgacccgaac ccgcgtcttg ctggacagac caagtcgttt
     1501 gatcacccgc agggtctcga cggtcgaatc atccatgcag agcttgaaat cgatggttcg
     1561 cgcctgaggg aaggagcggg ggagtgtctt acactcctcg tgatcgaccg aatagcagtt
     1621 gaggatcccc agctcgggaa aatcgaaggg ctccgctcca ctcagcggct cctccagcac
     1681 atagcggccg tttcggtaag caaccgcctt gcacaggcac tcgtcgatca tgacccaagg
     1741 gctgaacgca gcgacaaagc catcgtgccc gtggcacacg gagttgtcgc cgtcgcggat
     1801 tttcagctcg gttacgctat cgagcaggtg cttgccggcg tatgcggcgt agacattggt
     1861 ggtaccggga tcggcgccca tgcccaacag ggcaagccgg ccggcagcct tgaactgggc
     1921 atcaagtgcg aactggtctt ccatcttcgg aatgccatcg gcatcggttc ctgcactggc
     1981 caggtcgatg tagtcgcatc cctcctgaag gcacgcgcgc atgatcgcca tgttggtggc
     2041 gggaagcgcc gcgttgagga cgagagtggc agcagtctga cgtatcgcag cagcaacagc
     2101 ggcccggtcg ccggcatcga gagagacagc cgagacctta cgatcgttga gccgatccgc
     2161 taagagggaa gcacgggcgg ataccgtgtc ggcgatgacg agtttctcga gcaccgcttc
     2221 cttcgcgaat ttgagggcgg acacggtccc caccgcgccg gcgcccacca gcaggactct
     2281 cacaaactcc tcgtttcatt gttggcgcgg cactcggtct ggctcctatg gcgaaccctg
     2341 tcgcctgcag aacctcgccc ccgccgctga tgggggctca cagctcaagg agatagtcag
     2401 ctgtgagagt ggaccctccg cttggtcgga ggatgcaaac gtaccggcct ccggggaggc
     2461 ttgggtacac cgccatagta gctccgaaac cctcccccct gtccagcccc tccatcacct
     2521 gccactggca gccttgacag cacaagcggc ggatacaaat aacaaacctg ttgaggcaca
     2581 aacgcttggg ctgaaatcct gaagcgcggc tgcaaattta tgcagctgga tttcgcgcat
     2641 ggacccaggt cgacaagcac ttacttcccg catcggccag ggataagctc ccgagcccag
     2701 tcgtttctca gcatctgatg agggcctgat gcccggtgtc attcgtctac agaccgaaat
     2761 ccctggcccc aagagtcgca gactgttggc ccgccgcgcc caagccgttc ctcgcggggt
     2821 tccggcagtc acacctattg ccgtgatcca cgccgaaggt gcgctgatca ccgatgcgga
     2881 cgggaaccgg ctgatcgatt ttgccggcgg cattggcgtg gtgaacaccg ggcaccgcca
     2941 tccctccgtt gttgccgcgg tccgagagca gctcgatcga tatgcgcatg tctgctttcc
     3001 cgtctccacg tacgagccct acgtggagct ggcggagcgg ctcaaccaga tcaccccggg
     3061 cgaccatccc aagcgcacgt tcctattgaa cagcggcgcg gaggcaatcg agaacgccgt
     3121 gaaagtggcg cgtcactata ctggccgcgc cgcagtcgtg tgcttcgagc acgccttcca
     3181 cggacgcacc aatctggcga tggcgctcac ttcgaaggtg atgccgtata agaaaggttt
     3241 tggccccttt gctccggagg tctaccggat tccgtatccc tactgctatc gctgtgcggc
     3301 gaggcagcga agcagcgggt ccggggggcg gtgctgtatg gcaagccggg agtcgctcga
     3361 ccagatattt gcctcgctgg tcgatcccga ttctgtcgcc gctgtcgtca tggaactgga
     3421 gctgggggaa ggtggcttcg tgccggcacc ccgagagtac gtggaggctc tcgccgaatt
     3481 cacccggcag catggcattc tcttcatcgc tgacgagatc cagagcggct tcggccggac
     3541 cggcaaagtc tttgcctgcg agcatttcaa tctggttccc gacatcattg tcaccgcaaa
     3601 gtcgctcgcg ggtgggctac cgctcgcagc cgtgaccgga cgcgctgagg tgctggagtc
     3661 cgctcaggtg ggtggtttag gcggcaccta cggcggcaat ccgttggcgt gtgcagcggc
     3721 gctcgctgtg ctcgacgcta tggagaagga ggacctcccc aggctcgctg ccggactcgg
     3781 tgagagggtc cggtcccggt tctgccagat ggcaacgaag ttctcctgta tcggggatgt
     3841 ccggggtctc ggcgcaatga tagggatgga attggtgacc gaccgggaga cgaagattcc
     3901 tgacaaggca ctgacggcac gggtgctggc cgcagcattg gaacgcgggt tgattctgct
     3961 gtcttccggc acctacggca acgtcattcg ggtacttgcc ccgcttacca cgccggccga
     4021 ggtggtggac gaaggcctca gtgtgctgga gcgcgcactg gaggccgcgg tttcgtgacc
     4081 ggctcgcctt tgggcgaccc ggtagtccag ttgctaggcg tctccaagac atttggaggg
     4141 gtcaaggccg tcgacaacgt ctccctcgac atccacgccg gcgagttctt ctcgctactg
     4201 gggccttcgg gctgcggcaa gacgacaacg ctgcgcctgc ttgccgggct ggagcaaccg
     4261 gatgcaggag gacaggtgcg cctgctgggt gagacggtga accagaagcc accatacgag
     4321 cgcaagctgt ccatggtatt ccagaactac gccttgttcc ctcatctcac cgttgcacgc
     4381 aacgtggcct ttggcctcga gcggcgcaaa acaccgaggc ccgagatcgc cgaccgcatc
     4441 cggagagtac tgaccatggt gcgcctcgag ccggacgtct ttgccgatcg gatgccaagc
     4501 caactctcag gcgggcagcg gcagcgggtg gcgctcgccc gcgctctcgt gctcgagccg
     4561 gcgatcctgc tgctggacga gccgctcgga gcaatcgatc tcaagctccg gaaagagatg
     4621 cagctggagc tcaaggccct caaccggcag ttgggaacga cgttcgtcta tgtgacccat
     4681 gatcaggaag aggcgctgac catgtcggat cggatcgctg tcatggaacg cgctcgggtg
     4741 gcgcaggtcg ggacaccagc tgagatctat gagaatccgc ggaccgcgtt cgtagccaag
     4801 ttcatcggag agtccaactt cttcgaggga acaatacagc gagcgaccga tggagcctgg
     4861 actgtccaga gcaaagatgg cggcagtttt cgggttccga atcacccccg gctgcaaccg
     4921 ggtacatcga tccggattgc agtgcgcccg gagtggatgg acgtctgccg gctcgatgcg
     4981 gttcctccgg gggaaaatgc gctgagggga acaattcgag ataccatcta tttgggggag
     5041 acgatgcacg tgattgtcat cgtgccccag gtgggtgacg tgaccgttgc cgtgcgaaac
     5101 gagggccagc tcatcaaacc actcccctgg agaccgggtg atcctgccgc ggtggcgtgg
     5161 ttgccggagg actgtcaaat cctggaagac gagtagtggc tgatcgacga gggtggaccc
     5221 ttctggcgcc cggggccgtt tggctgttgg cgttcttcgt agtgccgatt ctcatcatgt
     5281 tcatctacag cttcatggct cggggggtct acggcggggt cgagccgggt ttcactctcc
     5341 agcactacgc ccgcttcgtc gatccgcttt atctggcggt gctcgagcgg acgttcctgt
     5401 ggtcgattgc ctgcaccctc atttgtctgg tgttcggctt tccagtcgcg tatgtcatcg
     5461 tgcggtctgg gcgttggcgg aatctgcttc tgttcctggt ggtcctcccc ttctggacca
     5521 gctttctggt ccgcacgttc gccatgattt tcctgatgcg tgacaccggt ttgatcaaca
     5581 gctggctgct caagctgggg gtgatcggcc agccgcttac gatgctgtat acgccgtttg
     5641 cggtcatggc cgggctggtc tatggctttc tgccgttcat gatcctcccg atctacgcat
     5701 cactggagaa gctcgactgg tccctgctgg aggcagcgga ggtcctgggt gcccgtccgg
     5761 ctgctcggtt tgtccgagtg accctgccgt tgaccatgcc aggggtcgtg gcgggagccc
     5821 ttctcgtatt cgtgccggcg ctcggctcct tcctcaccgc tgacctgctg ggcggggcca
     5881 aacagatgat gatcgggaat ttggttcaga accagttttc ctcggcgcgc aattggcctt
     5941 tcggctcagc cgcatcgttc atcgttatgg ccctcgtgct cgctgccgtc atgctctatc
     6001 tgcgggtccg ggatcagggc cagccgggat cgcgctgacg tgccaacccg attacctggc
     6061 tggctcctga cgactgctgc tgcggtttat gtatttctgc acctgcccgt tctggtcctg
     6121 atgatctttt cgttcaacag ctcgaaattc tcagtgcaat ggcgcgggtt cacgctccag
     6181 tggtatcacc gtctgctcga ccgtcccgac attctgcgcg ggctcaggat cagcctggtt
     6241 gtcggaggtg ctgccaccgt catctccgcc ctgctcggca ccatgatggc attagcgctc
     6301 gcccgccacc gcctccgtgg ccgtcgagcg cttgagggat ttctctacct gccgatcgtg
     6361 acgcccgaga tcgtcgtcgg catctcgctc ctcatccttt ttgcgctgct caagctcccc
     6421 ttggggatca tgaccattat catcgcccat gtcgcgttct gcatctcctt cgtcgtgatc
     6481 gttgtcctcg cgcggctcga aggcatggac cagagcctgg aagaggcggc gatgatcctt
     6541 ggggccgatg agattaccac cttctggaag gtgacggtgc ctcagctctg gcctggaatt
     6601 ctggcaggcg ccctgctggc cttcaccatg tcgttcgatg actatgtgat cacctcgttt
     6661 gtctccggtc cgggctcctc gacccttccc atcgtggtgt acagcatggt ccggaagaat
     6721 gtcgaaccca gcatcaatgc catcagtacg atcattctga tggtcacggc attgctgatc
     6781 tatggagccg atcgcctgat caggcggaga tagcgagcag gcggtgaagt tgtagagagg
     6841 atccgaatgg ttgaaaactg cttatggacc gagcttttct cacctcctcg tctccccacc
     6901 tccccgcttc ccagccgtac tgacgtcgca ataatcggcg ggggctatac cggcctctct
     6961 gctgctcgct gtctggcgcg acgcggcatc gatgtgacag tgctcgagac gcatacgatg
     7021 ggctggggtg ccagcagccg aaatggcggg ttcgtgcttc ccggtttcaa accagacatg
     7081 gaagagctcg agcgccgcat tggcagctcc cgggcggcca gcttgttcga gctgtcctta
     7141 gaggcaatcg cctttctcag agacctgatc gaccaggagc acatcgcctg cgacttcgtg
     7201 cgctgtggag cggtcactct cgcggccaag ccagggcatt tcggcgcctt gcaaaggagc
     7261 tgccgattcc tacgcgagcg gctgggttac gacactgacc tgttgggtcc cggagaactg
     7321 atctcggaaa tcggctcgac tcggtatctc ggcgcactgc tggatcccgc gggctgcgct
     7381 ctccagcctg ccaagtacgt cgccggcctg gccgccgcgg ctgctaaagc cggcgctcgg
     7441 ctgatggagc gaacggacgt cacgcgagta cagcgagtgc ccggtggctt cgacatcacc
     7501 acctcacagg gcgttgtgcg gacggaacag gtgctcgcgg ccaccaacgg atacacccct
     7561 cgagcactgc aggccttgcg ccgccgcgtg gtcccgatcg gcagctatca gatcgctact
     7621 gagccgctgg atgccggcct gaccggtcgg ctgatgccgc gccgacgcgt gttcagtgac
     7681 acgaagaacc tgctgtacta cttccggctc tctcctgatg ggcgtatggt ctttggcggt
     7741 cgggcgtcgt tcaccccggc cagccccagg cgcagcgcaa aaatcctgcg cgccggtatg
     7801 cgggacgtct ttccagagct ggcgcaggcg aacatcgagt atgtctggtc aggcaaggtg
     7861 gcgtacccta tggatcacct tcctcacgcg ggccgccatg atggacttca ctacgccatg
     7921 gggtactgcg gccacggggt agccttggcc acatatctcg gaatgagaat gggagaggtt
     7981 atcgccggca ccggcgcgcc gcccgatctg ggcaccaagg atttccgggc catcccattc
     8041 tatttcgggg cgccctggtt cctgccgatc atcggcggat actaccgttt ccgagactgg
     8101 atcagctgaa ctgactgtga atccctgttc gatctccagc gcattctgag gcgcagcggc
     8161 tctcggtgag caccaataac gagctcgagc gcctgatcga tgagtggcgc ccggccagca
     8221 tggcccggcg cgagttcgtc ctgcgagcgc tcgcgctcgg catcgatctg agctgtctcg
     8281 gaacgctgct ggccggttgc cacggcgaga ccaagagcgg cagtacggaa gccgcagcta
     8341 gagggtcaca gggggcccag gccgatctgg gcccgctgga aaaggagctg cacatctaca
     8401 actggtcgga ctacatcgcg gctgataccg tctcgaactt cgaaaaggag tttggcgtca
     8461 aggtcacgta cgatacctac gagagcaatg aagagatggt cgccaagctg caggccggtg
     8521 cgagcggata cgatatcgtg gtgccgagtg gacatatcgt cccggttctg gtggccaccg
     8581 atctgattac gccgatccac cgaaagtacc ttcccaactt cgccaacatc tctccactgt
     8641 ttcagaacct gccgaccgac ccggagaacc ggtacaccgt gccctggcag tgggggacca
     8701 gtgggatcgc ataccgaacc gacaaggtga gcactgcggt ggacagctgg gcaatctttc
     8761 acgatgcccg ctacgccaag aagatgacca tgatggacga cggccgagag gtcatcggtt
     8821 cacaactgcg gtatcgcgga cactccctga actccaccga tcccgccgag ctggcacagg
     8881 ccaaagccga cgccatcgat gcaaagaaac agctcaaggc ctacatctca gcgccggtca
     8941 aggcccaact gatttcggga gacgtttgga tctctcagct gtggagcggc gataccgcgc
     9001 aggccaaggt tgagcaaccc aatctcggct atgtgattcc caaggagggt tgcaccatct
     9061 ggagcgattc gctttgcatc cccagaagcg ctcccgacaa gcgggcggcc cacgaatgga
     9121 tgaactacat cctccggcct gaggtcgctg cagcaatttc gggagccacc ggatacggga
     9181 cacccaatgc tgccgccacc aagctgctga agaccccggt tccgtacccg acccaggaag
     9241 aactcaaacg cctcgaattc caggtcgacc tgggcaagga cactgccctc tgggatcaga
     9301 tctggaccga gatcaagtcg gcttagcacc gaaggagcgc cgatcaattg cgcgtatcga
     9361 acgacgaggt gatgcaacag acccggcgat atctcgagct gatcgccgga cgggaaatga
     9421 gttccgagga acagcggtcg ttcatcgccg agacggtgga gagctacgaa cgatactaca
     9481 atcgcggatt cattagctat cgaaagtcgg tcaccgaggc ggggcagttc gcggcaatcg
     9541 agtggtcggg tcagggctcg atcctgcgcg acctgctggg ccgtgagtat atcgattgtc
     9601 tcggcggcta cggaatcttc agtgccggcg tgaaccatcc cacgatcgtc aaggcggtca
     9661 ccgatcagat tcagcgcatg gcgctcaaca gccaggagct gctcgagccc tggcgggcgg
     9721 ccttggccaa ggtcctggca gccgtcaccc ctggcgatct gcagaa
//
LOCUS       DASRPQ010001188         1427 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3904806, whole genome shotgun sequence.
ACCESSION   DASRPQ010001188 DASRPQ010000000
VERSION     DASRPQ010001188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1427
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3904806"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(191..511)
                     /locus_tag="VFD73_13575"
     CDS             complement(191..511)
                     /locus_tag="VFD73_13575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75028.1"
                     /translation="MIGYSPIMISRARSKPKSPKFSGPPRVRSEPPTIEEAVAAAQDL
                     AADVEQQVAIAAGLMGVPEDQVWSHVLSAVPKRTLSRPARDWAQPTRSPQVVVVRRRR
                     IGPG"
     gene            complement(632..1030)
                     /locus_tag="VFD73_13580"
     CDS             complement(632..1030)
                     /locus_tag="VFD73_13580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIB/MDM2 domain-containing protein"
                     /protein_id="HZI75029.1"
                     /translation="MMPSKAKQTTTAEKADPTKSTASKSAGSKKASPAEGTAGKTASA
                     GKSATGKKVNPALMKPLQPSKELAAVVGSKPLPRAEVVSKVWDYIKKNNLQDPQNKRE
                     IMADDKLQAVFGKNRVTMFEMNKHLAQHLT"
     gene            complement(1238..>1427)
                     /locus_tag="VFD73_13585"
     CDS             complement(1238..>1427)
                     /locus_tag="VFD73_13585"
                     /inference="COORDINATES: protein motif:HMM:NF024591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75030.1"
                     /translation="YIVPKDPALTAEAVRAYCRESLTGYKIPRRVEFRDSLPKSNVGK
                     VLRRALRDEIVGVREQPS"
BASE COUNT          216 a          459 c          477 g          275 t
ORIGIN      
        1 gccgcagcag gttgggcggc gcgggcggcc gcgggcatcg ctggctcttc ttgccggccg
       61 ggctcgcgga cgcaatcgca aagccaaagg acgcgcgcgc tcaattcagg ggttcgacag
      121 ggctaccgct cttgctgggg ccaagagcgc acgatgaggt cgatgcatgc gcaacccgcg
      181 ccaccgcagg tcatcccggg ccgatgcgcc ggcgccgcac caccacgacc tggggcgagc
      241 gggtcggctg ggcccagtcc cgcgccgggc gggagagcgt ccgcttcgga actgcgctga
      301 gcacgtggga ccagacctga tcctcgggca cgcccatcag gcctgctgcg atggctacct
      361 gctgctccac atcagccgca aggtcctgcg cagcggcaac ggcctcctcg atcgtgggcg
      421 gctcagagcg cacccgtggt ggaccggaga acttgggcga cttgggcttg gagcgggcac
      481 gcgagatcat gatcggacta taccctatca cgtcaccttt gtgcagcgca gcaaaagcag
      541 cgctggactg caacacgcgt gtaaccccac ccacactcga ggctgggatg gggcggaggt
      601 gcaccccggc ggagccgggg gtcccgggcc tttatgtgag gtgctgggcg aggtgtttgt
      661 tcatctcgaa catggtcacg cggtttttgc cgaacacggc ctggagcttg tcgtcggcca
      721 tgatttcccg cttgttctgc gggtcctgga ggttgttctt cttgatgtag tcccaaacct
      781 tgctcaccac ctcagcgcgg ggcagcggct tggagcccac caccgcggca agctctttgg
      841 acggctgcaa cggcttcatc agggccgggt tcaccttctt gccggtcgcg ctcttgcccg
      901 cactggccgt cttgcctgcc gtgccttcag ccgggctggc cttttttgac ccggcgctct
      961 tcgaggctgt gctcttggtc ggatcggcct tttcggctgt ggtggtttgc ttcgctttgc
     1021 tgggcatcat cagttcccta ttcagcgctc ttcagagaag gcgcgtgtca ccggcttggt
     1081 tgtattcaag acacagaggg acagcaaaca ggccgcgtag ggcccgacat caatcaccat
     1141 agagctgcaa cctccgccgg gttagacggg gacgaggagt gaaccgaggg cacctgggta
     1201 acgtgtcccc gcgagcgagc ttcctggtct tggacctcta tgagggttgc tctcgcaccc
     1261 ccactatctc gtcgcggagc gcccggcgca gcaccttgcc gacattgctt ttcgggaggc
     1321 tgtcgcggaa ctcgacccgg cgcgggatct tgtagccggt caggctctcg cggcagtacg
     1381 cgcggacggc ctcggccgtc agggccgggt ccttcggcac gatgtag
//
LOCUS       DASRPQ010001189         2173 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4211464, whole genome shotgun sequence.
ACCESSION   DASRPQ010001189 DASRPQ010000000
VERSION     DASRPQ010001189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2173
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4211464"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..804
                     /locus_tag="VFD73_13590"
     CDS             <1..804
                     /locus_tag="VFD73_13590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75031.1"
                     /translation="PGSYEIYCPIGEDSHKKLGMDTHLQVVASGAPASSGDHMQMSPS
                     DSPPLKGRSISVTGGGPVIQILPGPFPFPDSVAPVLPAFGAERAMLESQEQNGPYSNN
                     VAPIAGTFSFSAWDRGATDDSISGVAEFTTQDQARWKLVLDRVQTKDVPHHPRFGGVI
                     MGLYYHGNTTVHTPLVPTINSAVALWAFGHLYRNGTLVTDDAPVHVMLLSRTRRKGDF
                     ALDCWDCSKNKIEEVQLQVTPAPGLPKIEAPGGFLFVNWEKSTERQPAG"
     gene            complement(850..1236)
                     /locus_tag="VFD73_13595"
     CDS             complement(850..1236)
                     /locus_tag="VFD73_13595"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZI75032.1"
                     /translation="MTREDELEQAEEQFFDALLRSDAAELARLLDPEFLLIDVITGSE
                     IPGRVLLDVVRSGQLVFDSIERVDRRVRLYPYVSIVTGQTRIRGRVDRDAFETHSRYT
                     HVYVPAAGGWRLVSAQGTPIASVSTL"
     gene            complement(1233..2078)
                     /locus_tag="VFD73_13600"
     CDS             complement(1233..2078)
                     /locus_tag="VFD73_13600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75033.1"
                     /translation="MRASLPAAAVLLALSGTAQAQVCRPGPASNEAKTLAIQSVPLAF
                     AAARSPSASARLELGLEGSYLPKVDDATATPAICQPGKGPEHTDFLFALPRPRILVPL
                     PAGLTAEASWVPPIRVNGLKADLFGFSLSKAVAWENGLVAAVRAHATVGSIRAPITCD
                     QDALGDPVSECFQGTLSNDKYSPNVYGADVSFGFGRGSIRPYFGGGYNRLQPRFQVNF
                     QNRFGSIDSTRVQVDLNRAVFFGGASWQMLDRIDLTGEVYAAPADAVTARLVLRAGLG
                     NSRGQ"
BASE COUNT          424 a          691 c          682 g          376 t
ORIGIN      
        1 cccggtagct atgagattta ctgtccaata ggcgaggatt cgcacaagaa gctcggaatg
       61 gatacccatc tgcaggttgt cgcttccggt gcgccggcgt cctcggggga ccacatgcag
      121 atgagcccgt cggactcgcc gccgctcaaa gggcggtcca tttcggtcac cggcggcgga
      181 ccggtcattc aaatccttcc tgggcctttc ccctttcccg acagcgtcgc tccggtactg
      241 ccggcattcg gcgccgagcg cgcgatgctg gaatcgcagg agcagaacgg cccctactcc
      301 aacaatgtcg cgccgattgc cgggaccttc tccttcagcg cctgggaccg gggcgctacc
      361 gacgactcga tcagtggtgt cgccgagttt accactcagg accaggctcg atggaagctg
      421 gtgctcgatc gggttcagac caaggatgtg ccgcatcacc cacgctttgg cggggtcatc
      481 atgggcctct actatcacgg caacaccacg gtgcacacgc cgctggtgcc aaccatcaac
      541 agcgccgtcg ccctgtgggc cttcggccat ctctatcgga atggcacgct ggtgacggat
      601 gatgcgccgg tgcacgtcat gctcctctcc aggacccgcc gcaagggaga ttttgcgctc
      661 gactgctggg actgctccaa gaacaagatc gaggaagtgc agctccaggt gacgccggcc
      721 ccgggactgc cgaagatcga ggcgccgggg ggatttctct tcgtgaactg ggaaaagtcc
      781 acggagcgtc agcccgccgg ctgagcacca cccgcagctg ggccaggggc aggagctcac
      841 aagcatggtc tagagagtgg agaccgatgc gattggcgtc ccttgagcgg atacaagacg
      901 ccagccgcct gcagccggta catacacgtg ggtgtaccgg ctatgggttt caaatgcgtc
      961 tcgatcgaca cgcccccgta tacgagtctg cccagtaaca atcgagacat atgggtagag
     1021 ccgaacccgc cggtccacgc gctcgatcga atcgaagacc agctggcccg agcgcaccac
     1081 gtcgagaagc acgcggcccg gaatctcgga tccggtgatc acgtcaatca gcaagaactc
     1141 ggggtccagg agcctcgcaa gctctgccgc atcagaccgg agcagggcat cgaagaactg
     1201 ctcctcagcc tgttcgagtt catcttctct cgtcattgtc ccctcgagtt gcccaggcct
     1261 gcccggagca ccagccgggc ggtcacggca tccgcaggcg cggcatacac ctcgccggtg
     1321 aggtcgatgc ggtccagcat ctgccagctg gccccaccga agaagaccgc gcggttcaag
     1381 tcgacttgga ctctggtgct gtcgatggat ccgaaacggt tctgaaagtt cacctgaaac
     1441 cggggttgca gacggttgta gccaccaccg aaatagggac gaattgaccc acggccgaac
     1501 ccaaaactca catcggcacc gtacacattg ggtgagtatt tgtcgttcga gagcgtccct
     1561 tgaaagcact cgctcaccgg atcaccgagg gcatcttggt cgcaggtaat cggcgcgcgg
     1621 atagagccca cggtggcatg ggccctcacc gccgcgacca gtccattttc ccaggcgact
     1681 gccttgctga gtgagaaacc gaagagatcg gccttcaggc cattcactcg gatgggtgga
     1741 acccacgatg cctctgcggt gagcccggcg ggcagaggta ccagaatccg tggacggggc
     1801 aaagcgaaaa ggaaatcggt gtgctccggc cccttaccgg gctggcaaat ggccggggtg
     1861 gccgtcgcgt cgtccacttt cgggaggtag ctcccttcga gtccgagctc gagcctcgcg
     1921 ctggcggagg gactcctggc agcagcgaac gcgagcggca ccgactgaat ggccagcgtt
     1981 ttggcttcgt tggacgccgg ccctggacga cagacctgag cctgcgccgt gccggagagc
     2041 gcgagcagca ccgcagcggc aggcaggctc gctctcatcg cgcagcctgc gtgatggtgg
     2101 ccgccgtatc gatcgctccc gccggatcgc ggacagctat ggcagcaaag gtgaacttga
     2161 gccggtcggc gac
//
LOCUS       DASRPQ010001190         1124 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2669852, whole genome shotgun sequence.
ACCESSION   DASRPQ010001190 DASRPQ010000000
VERSION     DASRPQ010001190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2669852"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..289)
                     /locus_tag="VFD73_13605"
     CDS             complement(<1..289)
                     /locus_tag="VFD73_13605"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HZI75034.1"
                     /translation="MLETAEPERLATGFIFTEGPLWHPEGYWYFVDLRRNQLLRLTPG
                     KQPELVRTTIGGNGTTFDLQGRLIVCEGDDRRLTRMGPDGKVGSLVDSYQGR"
     gene            453..>1124
                     /locus_tag="VFD73_13610"
     CDS             453..>1124
                     /locus_tag="VFD73_13610"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI75035.1"
                     /translation="MHDIGPRQLTSLYVAGPFSMGYVDFFTFLIPLYGLSLGLDAAEI
                     GVLVGARSILALFLSIHIGVLMDRFGTRAVTFVFVWIGMFLAPLFPLAASFWALLLLQ
                     LVNGAAVSFAWSGAQTLIAQLAEGDPRDIGRFSFFARLGSTSAPIVAGAVWDLGGTWP
                     AYLLGSVWGMILTIALLRTPEADFSSLLPSGTNRRRFRARDAWPRMSDYVNSMKLIAL
                     PAVAVS"
BASE COUNT          176 a          347 c          351 g          250 t
ORIGIN      
        1 gacggccctg gtagctgtcg accaaggacc cgactttacc gtccgggccc atgcgggtca
       61 gccggcgatc atctccctcg cagacgatta accgcccttg caggtcgaag gtcgtgccgt
      121 tgccgccgat cgtggtcctg acaagctccg gctgcttgcc aggtgtcaag cgaagcaact
      181 ggttccggcg aagatcgacg aagtaccagt agccttccgg atgccagagg gggccttcgg
      241 tgaaaatgaa gccggtggcc aggcgctcag gttccgccgt ttccagcacg tcggacagat
      301 aaatattcgt ccgcatccta cccccctcct gttttgagtc tgcggcacag agtgccgctt
      361 tcgtgatggg cgggcaatta gccactgcac gacagggtgc cgtggcaaga taggggacat
      421 ggagtcccga cccgccgcgc gcgtgccgcg caatgcatga catcggtccc cggcagctaa
      481 cctctctcta cgtggccggc ccgttcagca tggggtatgt cgatttcttc acattcctca
      541 taccgcttta cgggctgtcg ctcgggctcg atgccgctga gatcggtgtc ctagtgggcg
      601 cacgatccat cttggccttg ttcctatcga tccacatcgg cgtcctgatg gaccgctttg
      661 gcacacgggc ggtgacattt gtgttcgtct ggatcgggat gttcctggct ccgctctttc
      721 cgctggcggc cagcttctgg gcattgctgc tgctgcagct ggttaatggt gcggcggttt
      781 ccttcgcctg gtcgggcgcg cagacgctga tcgctcaact tgctgaggga gatcccaggg
      841 acatcggcag attcagcttc ttcgcccggc tcggctcgac ctcggcgcca atcgtcgcgg
      901 gggcggtctg ggatcttggc ggtacctggc cagcttatct gctgggttct gtatggggca
      961 tgatcctgac aatagcgcta ctccggacgc cggaagctga tttcagctcg ctgctgccca
     1021 gcggaacgaa ccggaggcga tttcgcgctc gcgatgcctg gccccggatg tccgattacg
     1081 tcaactcaat gaagctgatc gcgcttcccg cggtggcggt gtcg
//
LOCUS       DASRPQ010001191         1443 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2669994, whole genome shotgun sequence.
ACCESSION   DASRPQ010001191 DASRPQ010000000
VERSION     DASRPQ010001191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1443
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2669994"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..589)
                     /locus_tag="VFD73_13615"
     CDS             complement(<1..589)
                     /locus_tag="VFD73_13615"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI75036.1"
                     /translation="MGTATRPAKTAPTPWDALSDVDAFVDEVLVELAAMAADGTKPTR
                     SGPKPALAGAELRKAIMAIWCVGFCGMQWRAIGQLSGIPFGTLHTLFARWTRLGLWHR
                     LLDRLRRSWRVACGDTPEPSTVVIDSRSCHSAPSCFTRGVDGGKKIKGVKVQVAVEKY
                     GIPLAIDVTPANTHDTKGIIPVLRELAGRGFQGPAL"
     gene            complement(605..1087)
                     /locus_tag="VFD73_13620"
     CDS             complement(605..1087)
                     /locus_tag="VFD73_13620"
                     /inference="COORDINATES: protein motif:HMM:NF024752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZI75037.1"
                     /translation="MVRPQDPAEQTQCYSGKKKDHTVKNILLVNALLIILFLSETVGG
                     RIHDKRLADATPYPLPAGSRLLQDLGFMAFTLPEVEILMPTRKPPGAELPLAQQTANQ
                     ALNSRRLRIEHVNSSVKRCRVVKDRIRLWKQGVRDVVMEISCALHNFRVRLTPWQPMV
                     "
     gene            complement(1018..>1443)
                     /locus_tag="VFD73_13625"
     CDS             complement(1018..>1443)
                     /locus_tag="VFD73_13625"
                     /inference="COORDINATES: protein motif:HMM:NF025000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZI75038.1"
                     /translation="RFTVYRTCPLATPEDRLFFLLTYLKTYAVQVVQGRLFGMGQSKA
                     NQWIHVLLPALLAALRTLGDAPTRSLTALARRLGVSEGTLGVAPLEAPAPVALPASAP
                     VAGQASPLLLMTERNGALSAPRTLLNRRSVTVARKRTIP"
BASE COUNT          255 a          448 c          493 g          247 t
ORIGIN      
        1 tcagggccgg tccctggaaa ccccggccgg ccagctcgcg cagcaccggg atgatgccct
       61 tggtgtcgtg agtgttcgct ggcgtgacat cgattgcgag cgggatgcca tatttctcga
      121 ccgcgacctg gaccttgacg cccttgatct tcttgccgcc atcgacgccg cgcgtgaagc
      181 agctcggggc cgaatggcag gagcggctgt cgatcaccac cgtgctcggc tccggggtgt
      241 cgccgcaagc gacgcgccag gagcggcgca accggtcgag cagccggtgc cacagcccga
      301 gccgggtcca gcgagcaaag agcgtgtgga gcgtgccgaa tggaatgccg gagagctggc
      361 cgatggcgcg ccactgcatg ccgcagaagc ccacgcacca gatcgccatg atcgccttgc
      421 gcagctccgc cccggccagc gccggcttgg gcccggagcg tgtcggcttc gtgccgtccg
      481 ccgccatggc cgcgagttcc accaggacct cgtcgacgaa ggcgtcgacg tcggacaacg
      541 catcccaggg ggtcggagcg gtctttgcgg gacgggtggc ggtgcccata tgagtttatc
      601 ccgattagac cattggctgc caaggggtca ggcgcacccg gaagttatgc agggcacagc
      661 tgatttccat cacgacatcg cggacgccct gcttccacag acggatccgg tctttgacca
      721 cgcggcagcg cttgacactg ctgttgacat gctcgatgcg caggcggcgg gagttgagcg
      781 cctggttcgc tgtttgctgc gccaagggca gttccgcgcc cggtggtttc ctggtcggca
      841 tgaggatttc cacctcgggc agcgtgaagg ccatgaagcc cagatcctgc aacaatcggc
      901 tcccggccgg taaaggatac ggtgtcgcgt cagcaagccg cttgtcatgg atgcggcccc
      961 cgacggtttc gctgaggaag aggatgatga gcagggcatt gaccagaagg atattcttta
     1021 cggtatggtc ctttttcttg ccactgtaac actgcgtctg ttcagcaggg tcctgggggc
     1081 ggacaatgcg ccgttccgtt ccgtcatgag caaaaggggg gaggcctgcc cagccacggg
     1141 tgcagaggct ggcaaggcca cgggcgcagg cgcctccagc ggcgcgaccc cgagcgtccc
     1201 ttccgagaca cccagccggc gcgcgagagc cgtgagagaa cgagtggggg catcgccgag
     1261 agtgcgcagc gccgcgagta gcgccggcag caggacatgg atccattgat tggctttgct
     1321 ctggcccatg ccgaacagcc gcccctggac cacttggacg gcgtaggtct tcaggtaagt
     1381 gagcaaaaag aacagtcgat cttccggggt tgccagcggg caggtccgat agaccgtgaa
     1441 ccg
//
LOCUS       DASRPQ010001192         2191 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2670217, whole genome shotgun sequence.
ACCESSION   DASRPQ010001192 DASRPQ010000000
VERSION     DASRPQ010001192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2191
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2670217"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(59..277)
                     /locus_tag="VFD73_13630"
                     /pseudo
     CDS             complement(59..277)
                     /locus_tag="VFD73_13630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084489.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
     gene            411..1441
                     /locus_tag="VFD73_13635"
                     /pseudo
     CDS             411..1441
                     /locus_tag="VFD73_13635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015926997.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            1718..1963
                     /locus_tag="VFD73_13640"
                     /pseudo
     CDS             1718..1963
                     /locus_tag="VFD73_13640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011517431.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
BASE COUNT          373 a          705 c          740 g          373 t
ORIGIN      
        1 accttggcac atcgcgatgc cgtcaggagg ggcatccact ccaccatttg tctccagttg
       61 ccggcagacg ccgccggatc tggttggcga agtcctggcc gaacttcagc gcccattgcc
      121 gtacggtctc gtggctgacg atgatgccgc gtgcggccag catctcctcg accatacgca
      181 agctgagggg aaagcggaaa tacagccaca ctgcatggct gatgacctcg gctgggaagc
      241 gatagccggc gtagctgggg caaacgggcg tcgtcatccc gtcccgctac tcgccccgcc
      301 ctcaatccgc aagccggccg gtagccaagt tgacatggcg ttattgcggg ctggtgccct
      361 ccagctgcaa ccggggtctg atgccatcgg acccgctgag gagagctggc atggaacagt
      421 atgttggatt ggacgtctcg caggagcaga cctcggtctg tgttgtcgac gggggcggca
      481 aggtgatctg ggaaggcaaa tgcacctcta ccccggaggc gatcgccgcg accctgtgcg
      541 cgagggcgcc cgaggcgatg cgcatcggtc tggagagtgg tcccttgtcg gtctggcact
      601 ggcacgagct acggcagctg ggcctgcccg tggtctgcct cgacgctcgg cacgccaagg
      661 cggcgctcgc cctgcagctg aacaagtctg accgcaatga tgcacgcggt ctggcgcaaa
      721 tcgtgcgcac gggctggtac cgcgaggtga aggtcaagag cgtggacagc cacctggtcc
      781 gctccctgct catcgcccgc gcgcagctgg tgcgcatgcg cgttgacctc gccaaccaga
      841 tccgcggcac cctcaagccc tttggtctga tcgccggtaa ggggggtggg cgacccttcg
      901 ccgagcgggt gcggtcgttg gtcgccggcg ggcccctgca ggaggtggct ggagcgctgc
      961 tagcggcctg gcaggctatc ggcgagcaga tcgcggtgct cggccgtcgg ctcgtggccc
     1021 tggcccggca ggacgaggcg gtacggcggt tgatgactgc acccggggtt ggcgtcctgg
     1081 tcgcgctcgc ctatgtcagc gtcgtggatg cgccggagcg cttcgccaag tcgtccagcg
     1141 tcggggccta catcggcctg acgccgcggc gctatcagtc cggcgagcag gactacaccg
     1201 gccatatctc ccgctgcggc gacaagctgc tgcgcaccta cctgtacgag gcggccggga
     1261 tcatcctcca tcgggtctcg cgctggtcgg tgctgaaggc ctgggggacg cgcctggcaa
     1321 agcggatcgg caccagaaag gcgaccgtcg ccgagcccgg aagctctcgg tcatcctcca
     1381 ttgcatgctg cgtgacagca gcgagttccg ctggtcggca aaggaggtcc ccgcggcatg
     1441 agcatccaat agcaaagcca ccagatccgc cgctaccggc ggaagggtgt cccttgtcgg
     1501 gacggggcac cggtcatcgc gtgggtaccg ttgcggccat gagcctccaa gctcggatga
     1561 accgcgtagt tgacatcacg aggccggcgc ttccgacacc atcatgcggc ggctcacacc
     1621 gaccgcggag agaaccatga cccgacaggg acctcatcac cgctcaggcg ctgaacggag
     1681 ggcttgactg tccaacccgc aataagagaa cggtgccctg aagacgcacc tgcgcggggc
     1741 acaggtcgtg ctgcgcagca agagcccgga actggtccgg caggagttct ggggcctgct
     1801 gctggcgcat ttcgccgtac gcgggctgat gcacgaggcg gcgctgcggg ctgatgaaga
     1861 cccggaccgg ctctccttcc tgcacgcagt gcgcgtggtc cggcgcaagc tatcgctgtt
     1921 tgcggctctt ccccccccct ccggccaggc tcgtcctgca tgaggcggta ctgaacgaga
     1981 tcctggaaga gcgcgtggtg agcagccggg gacgccgggt gccgcgcggg gtcaaacgca
     2041 aaatgagcaa ctatccgttg cgaccccgtg catcgcagcc catcgtccgg atcaacttca
     2101 ccaccgccat cgtgctcgta aaatgaacag tattggggct agtgtcctga tcgcaaagtt
     2161 tctgagatta agtttccacc aggttgcagg c
//
LOCUS       DASRPQ010001193         1413 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3294581, whole genome shotgun sequence.
ACCESSION   DASRPQ010001193 DASRPQ010000000
VERSION     DASRPQ010001193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1413
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3294581"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            274..870
                     /locus_tag="VFD73_13645"
     CDS             274..870
                     /locus_tag="VFD73_13645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75039.1"
                     /translation="MATVPVVFECSVSSGFLMAPNEHQRIGWVTKLDGFGLPVGGLRA
                     DLQVSDPLAAGNGEPMAVPVAGVIEKFSWASGTGDPLQLDFYVSQENAFQIKALQQTT
                     LKNTAVKVLDFLIADYDQESKAWFTELIPVQQLSGTISGQGVPQLNVDLTPVPVKDGI
                     DVNVYKVSIAIAPPPHQVYALKLASGSTRTVAKSWGVA"
     gene            1079..>1413
                     /locus_tag="VFD73_13650"
     CDS             1079..>1413
                     /locus_tag="VFD73_13650"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HZI75040.1"
                     /translation="MASNEVTGGARPLRFGVVAPLRTELPAWRDQVRRIADSGYSTLL
                     MPDVQQWQPAPGPALAVAATLADLRVGTWLYASPLRMPRSMAWEAHSLSVLTEGRFEM
                     GIGTGRPGI"
BASE COUNT          236 a          450 c          482 g          245 t
ORIGIN      
        1 gatgtgctga tgctgttcca gcaggatctc gatcatgtcg ccttgcggct gatcgacggc
       61 ccgcgccgct gctccggtga cgtcactcat cggtcgcctc ctacgctgaa gtgctggtcc
      121 tggcgcacgc accctctcca gaccgggacc gcgtaaacag cagccagatc ttcccgggtt
      181 cggctgccgc ttgtaggttc ggaccatagg gagggaacag cggcgggcag tgcggcggct
      241 gccggtcgcc ggagacgatg gggagggcac acggtggcaa ccgtgccggt cgtattcgag
      301 tgcagcgtga gttccggctt cttgatggct ccgaacgagc atcagcggat cggctgggtg
      361 acgaagcttg acggcttcgg cctgccggtc ggcggcctgc gagccgacct ccaggtcagc
      421 gatccgctgg ctgccgggaa cggcgagccc atggctgtgc ccgtggccgg tgtcatcgag
      481 aaattctcct gggcgagcgg caccggggac ccgctgcagc tcgattttta cgtctcgcaa
      541 gagaacgcct tccagatcaa ggcactgcag cagacgaccc tcaagaacac ggccgtgaag
      601 gtgctggatt tcctcatcgc cgactacgac caggagtcca aagcctggtt caccgagctc
      661 atcccggtgc agcaactgag cgggaccatc tccggccagg gagtccccca gctgaatgtc
      721 gacttgaccc ctgtcccggt caaggacggc atagacgtca acgtctacaa ggtcagcatc
      781 gcgatagcgc cgccgccgca tcaggtctac gccctcaagc tggccagcgg ttccaccagg
      841 acagtcgcga agtcctgggg cgtggcgtag ttcgattgcc cccatggggg tgctggctgg
      901 ccggggtgcc gtgtgccctg ggaaggcatc acctgcccct gccgtcacaa ggccggcccg
      961 cgggaccggg aaccccagct cccggcagcg gccagatgac gccggaccga tgagttccgg
     1021 gctgctcggt ggtcaaactg cttggacagg ttcggacggc aatgaaagga cagcgacgat
     1081 ggccagtaat gaggtgaccg gcggagccag gccactgcga ttcggggtcg tcgcccctct
     1141 caggactgag ctaccggcgt ggcgagacca ggtgcgccgt attgccgaca gcggttactc
     1201 gacgcttctg atgcccgacg ttcagcagtg gcagccggcg ccgggacccg cgttggctgt
     1261 cgcggcgacc ctcgccgacc tgcgggtggg tacgtggttg tatgcctctc cgctgcgcat
     1321 gccccggagt atggcgtggg aggcgcactc actgtcggtg cttactgaag gtcgcttcga
     1381 gatgggcatc ggcaccggca ggcccgggat cga
//
LOCUS       DASRPQ010001194         1874 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_454195, whole genome shotgun sequence.
ACCESSION   DASRPQ010001194 DASRPQ010000000
VERSION     DASRPQ010001194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_454195"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..345
                     /locus_tag="VFD73_13655"
     CDS             <1..345
                     /locus_tag="VFD73_13655"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HZI75041.1"
                     /translation="QSNPEIRGKEAYKEWANGFRLATRQGFPDYVVTAEDLIAEDDKV
                     VKRWVFHGTHTGEFNGIPPTGKTVTMRGATVYRLAGGKIKETYWNSDILGMLQQIGAI
                     PAPGQQPAGASV"
     gene            complement(518..706)
                     /locus_tag="VFD73_13660"
     CDS             complement(518..706)
                     /locus_tag="VFD73_13660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75042.1"
                     /translation="MWRPTLGDTHERNAGQHALSPVIRPGSAEPVLISQISQHVTEIS
                     GAPGRGFLEGDDVGIVAP"
     gene            complement(1221..>1874)
                     /locus_tag="VFD73_13665"
     CDS             complement(1221..>1874)
                     /locus_tag="VFD73_13665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75043.1"
                     /translation="TGAAVRYRLYSQWGIERSDAARVVTLNTVTYVVGLLTSAGLAFA
                     LQPVLMPGFLHLPLRTARPIGLACLVAVAGYLIWSSRSGEDLRVWRLELPRTGIRMAL
                     AQIGVSIADWVLSGAALYVLLPHKVPFHVFFAVFLLGQIAGLIAQVPGGLGVFEAVML
                     WGLTPALTTPSILIGLVGYRLIYFLLPLGVATAVWAVREGRRWIRSRKGPHGARAPA"
BASE COUNT          353 a          609 c          589 g          323 t
ORIGIN      
        1 cagtccaatc ccgagatcag gggcaaggag gcgtataagg agtgggccaa cggcttccgg
       61 ctcgcgactc ggcagggctt tccggactat gtggtgacgg cggaagatct gatagccgag
      121 gacgataagg ttgtgaaacg ctgggtattt cacggcaccc ataccggtga gttcaacgga
      181 attccaccca ccggtaagac ggtgacgatg cgaggcgcca ccgtgtatcg gctggccggc
      241 ggcaagatca aggagaccta ctggaactct gatattcttg ggatgctgca gcagatcggg
      301 gccattcccg ctcctggaca gcagccggca ggggcatccg tctagcccgc gaaaacgcgg
      361 aaggagcgga aattgcagaa gggctgcgga aggttagcat ccattccgtc ttttccgccc
      421 gttccgcccg ttccgccctt tccgcttcag catgcgcttc ctctcctgga acatccttgc
      481 cggtggcggc tcccgctgcg gcgccatcct cgcggtgcta cggcgccacg atcccgacgt
      541 catcgccctc caggaaacca cgcccgggcg cgccgctgat ctctgtcacg tgttggctga
      601 tctgggatat gagtaccggt tcagcacttc ccggccggat caccggggac agtgcgtgct
      661 gtcccgcgtt ccgctcgtgc gtgtcgccga gcgtcggcct ccacacgctc ggatctttcc
      721 gcgtggctgg ctcgagctcg aagtggtgga cttcggagta aggcttgcgg cggtatacgg
      781 gccgcctcag ggaccgtcgg ttcccgcgtt ttggagcgcc gccgccacct ggctacgtcg
      841 gcgaaccagc ctgccatttc tgatggttgg cgacttcaac gcgggcgcct cgttgattga
      901 tgctcgagac taccggttca agtgcggtga tgcgtttacg cggctgactg aaatcggttt
      961 gatcgatctg tggcggcgga cgcacggcgg gaggagcgag catacctggt tcagtccttc
     1021 gaacggcact cgcggcggcc gagggtttcg aatcgaccat gcctttgcct cacccgactt
     1081 ggcccggcag gtggctgatt gccgttacga ccatgccgtc cgggagcgcc gctgctccga
     1141 ccactcactg ttgctgctgg acctctcatt gcaaggcgac ggagccgccg cggcccgccg
     1201 ttgcaacggc agagcccgtc tcaggccggt gccctcgcgc catgtgggcc cttccggctg
     1261 cggatccacc ggcgtccctc acgaaccgcc cacaccgctg tggccacacc caaaggcagc
     1321 aggaagtaga tcagacgata gccgaccagc ccgatgagga tggatggagt tgtcagcgct
     1381 ggagtgagtc cccacagcat gactgcctcg aagacgccaa ggccaccggg aacctgggcg
     1441 atcaggccgg cgatctgtcc cagcaggaac accgcgaaga acacatgaaa gggcaccttg
     1501 tgcggcagca gaacgtaaag tgccgcgccg gacaggaccc aatccgctat cgaaacgcca
     1561 atctgagcga gcgccatccg aatcccggtg cgagggagct ccagacgcca aacccggaga
     1621 tcttcaccgc tgcggctgct ccagatcaga taccctgcca ccgcaaccag acaggccaga
     1681 ccgatcggcc gtgccgtccg aagcggcagg tggagaaagc ccggcatcaa caccggctgg
     1741 agcgcaaacg ccaatcccgc ggaagtgagc agcccaacga cgtaggtcac ggtattgaga
     1801 gtcaccaccc gggccgcgtc acttcgctcg atcccccatt gcgagtaaag ccgatagcgc
     1861 accgcggcgc cggt
//
LOCUS       DASRPQ010001195         1013 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2959284, whole genome shotgun sequence.
ACCESSION   DASRPQ010001195 DASRPQ010000000
VERSION     DASRPQ010001195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2959284"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..367)
                     /locus_tag="VFD73_13670"
     CDS             complement(<1..367)
                     /locus_tag="VFD73_13670"
                     /inference="COORDINATES: protein motif:HMM:NF017970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1003 domain-containing protein"
                     /protein_id="HZI75044.1"
                     /translation="MTKPDQSTDGSQTKAGSNGLIALAVKLPHHPVVLEEQAQRAADI
                     QLRIADRITAFAGSMNFVYLHVALFAVWMLFLEKSPWPTLTLIVSLEAIFLSTFVMIG
                     QNRQASFQQAKADHDFNEQE"
     gene            complement(704..>1013)
                     /locus_tag="VFD73_13675"
     CDS             complement(704..>1013)
                     /locus_tag="VFD73_13675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75045.1"
                     /translation="PGDSSRLRSLALDLAWIRYRTVIVRLALQETHDGPLATPFGVFP
                     GREAVNAPRAGSWEVEDGKIRTSTATRRAPSSSPSSVPWPTSKPRSCQVGGAQDNDRA
                     "
BASE COUNT          175 a          327 c          325 g          186 t
ORIGIN      
        1 gttcctgctc gttgaagtcg tgatccgcct tggcctgctg gaacgaagcc tgccggttct
       61 ggccgatcat gacgaacgtg gacaggaaga tcgcctccag cgacacgatc agcgtcagcg
      121 tcggccacgg gcttttctcg aggaacagca tccagaccgc gaacagcgcg acgtgcagat
      181 agacgaagtt catcgacccc gcgaacgcgg tgatcctgtc cgcgatccgc agctgaatgt
      241 cggcggcccg ctgcgcctgt tcctctagga ccacagggtg atgcgggagt ttgaccgcca
      301 gcgcaatcag cccgttactc cctgccttgg tctgcgagcc atctgtactc tgatctggct
      361 tagtcatccc gcacctcctt cggtacctgc ggccgactag gggcctacgt ggccagccag
      421 gccagccagg tgtcggcgat gtcgcggcag ccgcttgcct ttaactccac ccgatatggc
      481 gatgcctgaa aaagcgatgg cacctttcgt ggcattgtcc agatctatga ctgcagacat
      541 ttaccgaacc cgcgcatccg cagccgttcg ggattattgc ctttcctcct ggacgggggt
      601 tttccgggcg ccggcgaacc caggccggcg gcctggttgc cccagacgaa gggcagccac
      661 gtggccgaga gctgagagcc tcaggcgaag gcgtgtgccg ggttcatgcc ctgtcgttgt
      721 cctgggcgcc gccgacctgg catgagcgcg gcttggaggt tggccagggc accgagctgg
      781 gagaagatga tggtgccctc cgggtagcag tcgacgtcct gatcttgccg tcctcgacct
      841 cccagctgcc ggcgcgcggc gcgttcaccg cttcacggcc ggggaacact ccgaatggcg
      901 tggccagagg gccgtcgtgc gtttcctgca gcgcgagccg gacgatgacg gtccggtagc
      961 ggatccaagc cagatcaaga gccaacgacc gcagacgcga ggagtcacca ggc
//
LOCUS       DASRPQ010001196         5892 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_769080, whole genome shotgun sequence.
ACCESSION   DASRPQ010001196 DASRPQ010000000
VERSION     DASRPQ010001196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5892
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_769080"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2174)
                     /gene="ligD"
                     /locus_tag="VFD73_13680"
     CDS             complement(<1..2174)
                     /gene="ligD"
                     /locus_tag="VFD73_13680"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HZI75046.1"
                     /translation="MPSRKSDPLFPYRAKRSLEQTPEPAGSPVPSPSTSAGGLFVVHK
                     HAARRLHYDLRLEVDGVLRSWAVPKGPSFDPRDKRLAVLVEDHPLEYGAFEGMIPKGN
                     YGAGAVIVWDRGRWTPIGDPTEGMQQGKLLFELQGVKLRGVWTLVKLKKGENEWLLIK
                     ERDGYAAPDKAVSEESVLSGLTVEDLETGRTPADGIRSELQRLSAVRSQVRAAAVRLM
                     LAETRTEPFSAPEWAFELKLDGYRALAVRDGTSRILSRNANDLSACFPELTQALDALP
                     FEQLLLDGELVALDEAGRPNFQRLQQRAQLRRALDIRHASVECPVTFFAFDLLAFEDF
                     DLRPLPLIERKALLRRAVPKVGVIRLLDHYVADGETLYREVQKLGLEGIVGKRLDSAY
                     KPGRSPAWIKIRTRRSEDFVIVGFSAPKGSRVGFGALYLGHYQDGTLTYCGRAGSGFT
                     EEQLTEVRTNLDALRRDPPACTGLLPQEPGTAWVEPRLVCEVEFTEWTEEGLLRQPVF
                     LRFREDKTPEECVGGGKAGRRESGEAENATPRTGVDAPSEPQASARRRPVRRAQDTSV
                     EFSNLQKVFWPEEGYTKGDLIDYYRQIAPWILPYLADRPVVLTRYPDGIAGKSFFQMD
                     APGFVPRWIRTDRRWSEQAEREIDYFICDDESSLAYLINLGTIPLHVWSSRVSKIEHP
                     DWCVLDLDPKGAPMRDVVAVAQATHDLCEKLRLPNYVKTSGSS"
     gene            2335..3204
                     /locus_tag="VFD73_13685"
     CDS             2335..3204
                     /locus_tag="VFD73_13685"
                     /inference="COORDINATES: protein motif:HMM:TIGR02772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HZI75047.1"
                     /translation="MPPRSIGSATISFGLVSVPVSLYSASESSATVSFNMLHKSCGSR
                     LKQQYICSKEGGIVEKDDMAKGYEFAKGQYVTFTAEEIKALDEKATNSIDISEFVPLN
                     AVDRMYLDKVYFLGPDKGGDRAYRLLGEALKVTGRAAVGQYSARGKQHLVLVRPLDGV
                     LVMEQLHYPAELKPAAEVPHPETPVKEAELALATQLIEQSATEEFHPENYRDTVRERV
                     LDAIQRKVEGQEITAEAPPAETKIIDLMDALKASLAKAGSATGERKPAKRVAAKEEEQ
                     EEPAPRRKRAARG"
     gene            3248..4075
                     /locus_tag="VFD73_13690"
     CDS             3248..4075
                     /locus_tag="VFD73_13690"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI75048.1"
                     /translation="MESFTTRNVARLLGLSPTQVRSQARAGFLSPLRGPRNDYRFSFQ
                     DLVLLRTARELARAQVPPHRIRSALRGLARQLPVGRSLSEIRITAEGQAVLVHDGGNA
                     WNPESGQLQIDFTIPELPKRQRRPARKLATAPEPDRTATAADWFDRALGLEAISVEAA
                     NHAYTQALSLDPCFWDAHVNLGRLLQLGGRCLEAIEHYRVAIRGGSDDPTAAFNLGTA
                     LEEQREWGAALAAYRHAIRLDPGFADAHFNLARLYEQLGRRAAALRHLRTYRLLSQS"
     gene            4211..4881
                     /locus_tag="VFD73_13695"
                     /pseudo
     CDS             4211..4881
                     /locus_tag="VFD73_13695"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
     gene            4922..5266
                     /locus_tag="VFD73_13700"
     CDS             4922..5266
                     /locus_tag="VFD73_13700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75049.1"
                     /translation="MAQNRTWNDEDNWWRNNFTSRPYATGRNYEEFRPAYQYGFESGQ
                     HHTGRSWNDVEPDLRSGWEKFEGKSGAGGTWESVKNAVRDAWDRITGQHDVDTDRMAD
                     FEEDRVSRGGRL"
     gene            5608..>5892
                     /locus_tag="VFD73_13705"
     CDS             5608..>5892
                     /locus_tag="VFD73_13705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75050.1"
                     /translation="MTMPDTESRASQADQTGQQGGGSARDQIRDMKDQVVDQAKNTFQ
                     QARDRATSSLGESKSHFADQFGTIAEAMRRTTEHLRSEDQQRIAGLTETVA"
BASE COUNT         1166 a         1836 c         1805 g         1085 t
ORIGIN      
        1 gacgagccgc tggtcttcac gtagttgggc agtcggagct tctcacagag gtcatgggtt
       61 gcctgggcga ccgccaccac gtcacgcatc ggcgcgccct tgggatccag atcgagcacg
      121 caccagtcgg gatgttcgat cttcgagacg cgactgctcc agacgtgaag cgggatcgtc
      181 cccagattga tgaggtaggc gagcgaggac tcgtcgtcgc agataaagta atcgatttcg
      241 cgctcggcct gttcgctcca cctgcggtcc gtgcggatcc accgcggcac aaaacccggt
      301 gcatccatct gaaagaacga tttaccggcg atgccgtcgg gatagcgagt cagtaccacc
      361 gggcgatcgg ccaggtaggg aagaatccac ggggcaatct gccggtagta gtcgatgaga
      421 tcccctttgg tatacccctc ctccggccag aagactttct gcaggttgct gaattcgaca
      481 ctcgtgtcct gagctcttcg aaccggccgt ctcctcgcgc tggcttgcgg ctcactcgga
      541 gcatctacac cggtcctcgg cgtagcgttc tctgcctccc cgctttcccg cctcccagct
      601 ttcccgcccc ccacacattc ctccggtgtc ttgtcctccc ggaagcgcag gaacactggc
      661 tgccgcagca ggccctcctc ggtccactcg gtgaactcga cctcacatac cagccgtggc
      721 tcaacccagg cggtgcccgg ttcctgcggc aggagcccgg tgcaggccgg cggatcgcgc
      781 cggagtgcgt ccaaattggt tcgcacctcg gtgagctgct cctcggtaaa cccactgcct
      841 gccctgccac agtacgtcag cgttccgtcc tggtagtgtc ccaggtacag cgcgccgaaa
      901 ccgactcggc tgcctttggg agcgctgaag cccacgatca cgaaatcttc cgagcggcgg
      961 gtgcggatct tgatccatgc cggagagcgg cccggtttat atgccgaatc caggcgcttt
     1021 ccgacgatcc cctccaggcc gagcttctgc acttcccgat agagggtttc gccgtcggcc
     1081 acgtagtggt ccagcagccg gatgacacca actttgggca cagcccgccg gagaagagct
     1141 ttccgttcga tcagcggaag cggccgcagg tcgaaatcct cgaaggcgag cagatcgaat
     1201 gcaaagaagg tgaccggaca ctccacgctg gcgtgtcgga tatcgagtgc ccgccgcagc
     1261 tgggcccgct gttgcagtcg ctggaaattc ggacgccctg cctcgtccaa ggctacgagc
     1321 tcaccatcga gcagcaactg ctcgaatgga agcgcgtcca acgcctgcgt gagctcggga
     1381 aagcaggctg agagatcgtt ggcgttgcgg gagagaatcc gcgaggtgcc gtctcgtacc
     1441 gccagggcgc gatagccatc gagcttgagc tcgaaggccc actccggcgc gctgaacggc
     1501 tcggttctgg tttcggcgag catcagccgc accgccgcag ctcgcacctg gctgcgaacg
     1561 gcagataggc gctgaagctc ggaccgtatc ccgtcggccg gggtacgacc ggtctcgaga
     1621 tcctccactg tgagcccgga aagaaccgac tcctcactga ccgccttgtc aggagcggcg
     1681 tagccatcgc gctctttgat gagcagccac tcgttttctc ctttcttgag cttcaccaag
     1741 gtccagacgc ctcgaagttt cactccttgc agctcgaaga ggagtttccc ctgctgcatt
     1801 ccctcagtgg ggtcgccgat cggagtccag cgcccgcggt cccacacaat caccgctccg
     1861 gcaccgtaat tccccttcgg gatcattcct tcaaaagcgc catactcgag cggatgatcc
     1921 tccaccagga ccgccagcct tttgtccctg ggatcgaagg acggtccttt gggaaccgcc
     1981 cacgaccgga gaactccgtc gacctcaagc cggagatcgt agtgcaaccg tcgcgcagcg
     2041 tgcttgtgca ccacgaatag tccaccggcc gaggtgctcg gcgatggcac tggggagccg
     2101 gccggctccg gagtctgctc gagcgaccgc tttgcccggt aagggaagag gggatctgat
     2161 ttgcgtgaag gcatcggctg gaaagttaag agagtcgctg ccggatgcgt gaggcgtgcc
     2221 tgcgacacgt ggatccgagc tcgaggaaat aactaggtgc cagataagta gatcgggcaa
     2281 ttcctccagc gattcatctt gcgggcttca gatttgcggc gtatatgggt ctcaatgcca
     2341 ccacgatcaa tcggaagcgc aaccatctcc ttcgggctgg tctcagtccc ggtgtctctg
     2401 tattcagcca gcgagtcgtc agcgactgtc agcttcaata tgctgcacaa gtcctgcggc
     2461 agccggctga aacagcagta tatctgctcg aaagagggcg gaatcgtcga gaaagacgat
     2521 atggccaagg gctacgagtt tgccaaggga cagtacgtga cgttcaccgc cgaggagatc
     2581 aaggcgctgg acgagaaggc caccaattcc atcgacatct ccgagttcgt gccgctgaac
     2641 gcggtcgacc ggatgtatct ggacaaggtg tatttcctgg gtcccgacaa aggcggcgac
     2701 cgggcgtatc gtctgttggg agaggcgctg aaggttaccg gacgggccgc ggtgggccag
     2761 tactctgctc ggggtaagca gcacttggtc ttggttcgtc cactggatgg ggtgctggtc
     2821 atggagcagc tgcactaccc cgccgagctc aagcctgccg cagaggtgcc tcatccggaa
     2881 accccagtca aagaagcgga gctggcactg gccacccaac tgatcgagca gtcagcaact
     2941 gaagagtttc atccggaaaa ttaccgcgac acggttcgtg agcgtgtcct cgacgccatt
     3001 cagcgcaagg tcgaaggcca ggagatcaca gcggaagcgc cacctgcgga aaccaagatc
     3061 atcgacctca tggatgcgtt gaaggcaagt cttgccaaag ccggctcggc tacaggcgaa
     3121 cggaagccgg ccaagcgggt tgcggccaaa gaagaggagc aggaggagcc cgcacctcga
     3181 aggaagcggg ccgctcgagg ataagcgggg tatacagcgg caccccggag tcgtaaattg
     3241 ttggctcatg gagtcattca ccacccgcaa tgtggctcgg ctcctcggcc tgtcccctac
     3301 ccaggtacgc tcccaggccc gagcaggctt tctctccccc ctccgcggtc cccgtaacga
     3361 ttaccgcttt tccttccagg atctggtgct gcttcggacg gcacgggagc tcgcccgagc
     3421 ccaggtcccg ccgcatcgga tccgaagcgc gctgcgaggc ctggcccggc aacttccggt
     3481 tgggcgctcg ctgagcgaga tcaggattac agcagaaggg caggcggtgc tggtacatga
     3541 cggaggcaac gcctggaacc ctgaatccgg tcagctccag atcgacttca ctattcccga
     3601 gctacccaaa cgccagcgtc ggcccgctcg taagctcgcg acggcaccgg agccagatcg
     3661 cacagctact gcggccgact ggttcgatcg ggcactgggg ctcgaggcta tttccgtcga
     3721 ggcggccaac catgcatata cccaggcact ctcgctggac ccctgcttct gggacgctca
     3781 tgtaaatctc ggtcgactgc tccagctggg cggccgctgc ctcgaagcga tcgaacacta
     3841 ccgggtggca attcgcggtg gcagtgacga cccgacagca gccttcaacc tcggcaccgc
     3901 attggaagag cagcgggagt ggggggcggc cctggcggca taccggcacg ctatccggct
     3961 ggatcccggc tttgccgacg cccactttaa cctggctcgt ctgtacgagc agctcggccg
     4021 ccgggctgcg gcgctgcgcc acctgcgcac ctaccggctt ctcagccagt cctgaagcgg
     4081 cctgtgggca cgccgccgcc gatcagccaa attcgcgaaa ttccctatgg cgactttcgt
     4141 cggaaccagc ggctggtcgt acaaggaatg gaaaggcagc ttctacccac caaagcttcc
     4201 agccgatgag atgctccgct actacgcgga gcgattcgat gccgtcgaag tcaacaactc
     4261 gttttatcgc atgccttcgg agcgaattct ggccgggtgg gcagagcagg tgcccgatcg
     4321 gtttcggttc gtgatgaaag cctcccgccg gatcacccac aaccagcgtc tcaggaacga
     4381 ggacgaatca ctttccattt tcctgcgggc ggtaaatccg ctgggtcacc gcctcggtcc
     4441 actctctttc agttgcctcc gaccttcaag gtcgacgtcc aaagactccg agaatttctg
     4501 gacctgcttc cgcgacgctg gagcgcggct ctcgaatttc gccacgcctc ctggttcatc
     4561 caggaggtct acgacctgct ccactctcgg aacgtgcccc tggtcacggt ggacgaggac
     4621 tccctcgatg gagctggagc gccactggtc tgcaccgcaa cgtggggata cttgcgactc
     4681 cggcggacca gctactccac cgctcagctg gtctcctggg cacagcggat ccgggcgcag
     4741 ccctggagtg acgcgtacgc cttcctcaaa cacgaagaag gcagtcccac ggggcccgcc
     4801 gccgcgcaag aacttcaagc actcctgcgt gcaaaaggtg atgaggatca cgactccgaa
     4861 cccgcacgat tgctactcta gccgtccttg gagtcagcct tcttgagcca aggaggagat
     4921 gatggcacag aaccgaacct ggaacgacga agacaactgg tggcgtaaca atttcacctc
     4981 gagaccgtac gccactggcc gtaactacga ggagttccgt ccagcgtatc agtatggctt
     5041 cgagtcaggg cagcatcaca cgggccgtag ctggaacgac gtggagccgg acctgcgctc
     5101 tggctgggag aagttcgaag ggaagagcgg cgccggcggt acctgggaaa gtgtgaaaaa
     5161 tgcggtaaga gatgcgtggg atcggatcac cggtcagcac gatgtggata ccgacaggat
     5221 ggccgatttc gaagaagatc gagtcagtcg cggtggccgg ctgtaagccg gcagttgaaa
     5281 gcgaacatag ggtgagttgg taaattttgc tggcggtcca ggagtcgggt tgcgggtgca
     5341 cttgggctcg ttacccgact cctgggccgc ctgtttttca gcccgaagat ggaggcgaga
     5401 ccggcgagag acgtgatctg tgacacggca cctcaagcat aagaaccgct ttttgtttgt
     5461 gcgttcttgc cggcaggtcc tggcgatcag atcgacctca ttttgcctcc aggtgctggg
     5521 tccagccggt tacgacgatc gctcaatccc gccgaggttc ggcggctggt tggagactgg
     5581 acgacaggtc agccaaggag caatacgatg acgatgccag acaccgaatc ccgcgcttcg
     5641 caagccgacc agaccggcca gcagggtggc gggagtgccc gcgatcagat ccgggatatg
     5701 aaggatcagg tggtggacca ggccaagaac acttttcagc aggctcgcga ccgggcaacg
     5761 tcgagcctgg gcgagagtaa gagccacttc gccgatcagt tcggaaccat tgccgaggca
     5821 atgcgccgga ccacagagca tctccgctcg gaggaccagc agcggatcgc cggcctgact
     5881 gagacggtcg ct
//
LOCUS       DASRPQ010001197         1824 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2671725, whole genome shotgun sequence.
ACCESSION   DASRPQ010001197 DASRPQ010000000
VERSION     DASRPQ010001197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2671725"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1002..1511)
                     /locus_tag="VFD73_13710"
     CDS             complement(1002..1511)
                     /locus_tag="VFD73_13710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75051.1"
                     /translation="MNAALIAAAAAVAGGLLTAYATRSVEAMRVRAALVEKAEERRLA
                     SIERFLLAVNAWLDWLMYIEEQPSQDHYPELNRRVKERDDAYRELILLSSDRLHHWLV
                     TVYAPLEYELKRTYAHDVRYLNPVTEEARNARIKFSRILREDLIDELRPEVEALRNPV
                     KHARSIRIS"
     gene            1631..>1824
                     /locus_tag="VFD73_13715"
     CDS             1631..>1824
                     /locus_tag="VFD73_13715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75052.1"
                     /translation="MDAEPGRQLPDPPATWQEHWFDHRQLLRLYYSDEHCAIYIDPDV
                     RRAEIGWLPRFINVTWQYSKA"
BASE COUNT          311 a          600 c          565 g          348 t
ORIGIN      
        1 tcccccgcgc ccgcggtcaa tcctctccgg cactgcgcac cgcccgtaac agcatcggtt
       61 cgtctatgaa acgcctggct ccggcgccat accgggcggc atagctatcc cgcgcccctt
      121 cccgtcgccg ctcgcagcgg acgggatgat cacgccgttc gcgcggcctt tccatgatcg
      181 tgaaggtatt tatccccgaa gcagggacaa gatccttcac gatcatgaag tccgtggtcc
      241 tggcgtcacc gccggatgcc acatccgtct ccgcaggccc accgtccccg cattccggcc
      301 gccattcagc gccagtcacg ttatcgcggg tagtttcctc ctatttcccg cgggtttgtg
      361 tccacgatca gccagtggtc ctatatctgg gacagatgtg gctgctgatg cggttcccgt
      421 ggggcactcc atcatcgtgt gcactttccc ccggaaagcg gggaaagtgc acacggtaac
      481 gccggcgggg cgccggcccg gttcgtgtga tgcggatggg aatggcgggc tggctgaggt
      541 ccgcgccgga gcgcgggccg gcgggaaagc cggatcgccg cctcgatggc cagacggcga
      601 ggctggtgcg ctttcacatt cgggaccctt ccctttcccg cgggttacgc tctacgaccg
      661 cggccgcgac ccgctgaatc gcctcagccg ccccgctagt ctcgcggtgc ggactcgcgg
      721 atcatcgtgg gccaaagcac cccctgggag gggtgaaacg gcccacgacg atggaaagag
      781 ccaggtacgc agtcacagga gatgactctt ttccctaggg cgggagcgca gagccggatt
      841 gtcacctcaa cggccaggca acgagaccgg atcgtgtttc ccgttcgggg atcccgtcct
      901 ttcccgcggg tttctgcccg cgataacggg cgctgctaaa cagcaacgtg cagggcgagc
      961 gctcacgacc ggaaccgtgc gggttatttt ccggcgcggc gtcatgaaat tcttatgctc
     1021 cgagcgtgct ttacggggtt gcgcagggct tccacttctg gcctcagctc gtcaattagg
     1081 tcttcacgaa ggatccggct gaatttaatc cgggcgttcc gcgcttcctc ggttaccgga
     1141 ttcaggtagc gcacatcatg agcatatgtc cgcttcagct cgtattccaa cggagcgtat
     1201 accgttacta gccagtggtg cagccggtca gaggaaagca agatgagctc ccggtaggcg
     1261 tcgtcccgtt ctttcacgcg ccggttcaat tccgggtaat ggtcctgtga aggctgctcc
     1321 tcgatgtaca tcagccagtc gagccacgcg ttcacggcca gcaggaatcg ctcgatgcta
     1381 gccagccggc gctcttccgc cttctctacc agagccgcac gaacgcgcat ggcctcgaca
     1441 ctccgtgtgg cgtatgcggt gagcaagcct ccagcgacgg cggcggccgc tgcgatcagg
     1501 gctgcgttca acgcctgctc ctttctcgcg gtcgctggag cgacagtatc ctggccggtc
     1561 cggaacctct atcaggatgc tgatcagagg caccggattc gggcagatac atgggaggca
     1621 ggaggacagg gtggacgcag agccggggcg gcagctacct gacccgccag ccacctggca
     1681 ggagcactgg ttcgaccacc gccagctgct ccggctgtac tacagcgacg agcactgcgc
     1741 gatctacatc gaccccgacg tgcgccgggc cgagatcggc tggctgcccc ggttcatcaa
     1801 cgtgacctgg cagtactcca aggc
//
LOCUS       DASRPQ010001198         1081 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2671808, whole genome shotgun sequence.
ACCESSION   DASRPQ010001198 DASRPQ010000000
VERSION     DASRPQ010001198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2671808"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          199 a          293 c          363 g          226 t
ORIGIN      
        1 tgctgaaggc tcagcaaagg cgcgagcccg atggagggct gtgcggtgac ggccacgtgg
       61 gtggccgcga tcccgcatta accctattca aagttaaggg acactccact gggattctcc
      121 tgacatattt ttagaactca cccccgccgg ggttttggcc ccgcttgaat cttaccagca
      181 gatagcgggc ctaggagtga acgcgaagga gtgtgtctat gcgaaggttg ttattggccg
      241 cttccgtctt gggggtcctg atcggagctt ccgtgccgct gcaagcgacc tcgcttcgcc
      301 tggccccggg agacatggcg atccaatccg atatcgattc ttccgtcgtg caagttcgac
      361 ggggcggagg cggacgcggt ggcatgggga tgcgtgggag aggtgggagc agcatgatgt
      421 ggcgcacagg caggcgccac ggcggcgttg cttggcgggg ccatagaggc cggggagggg
      481 ctgtctggcg tggccacaga gggcacggcg ttgcgtggag gcatggatat agacgcggag
      541 gcgtttgggt cggccggccg agatggcggg tcggctgggt cggctccggc tactactaca
      601 atcctgccta ctacaatcgt tattacaatc cgaggtgggg ctactgccgg cttgtgacgt
      661 ggcacggtgg gcgggtatgc cgatggtatc gtaggccgtg gtggtaagga taaatgggat
      721 cgtcaagtct gtgaaacggc cttaaacgat tgtggctgcc cccgatggcg gccacaatcc
      781 atcagcttgc cttcagctcg cctcggctgg gttaccatgt cctgccgcca acgctgatga
      841 tgagcctccg ctcttcggtt tgcttcaatc ctgacgccac ccgtgggcac cccccttaat
      901 tgcactgggt cccatgtgca ctgccctgca tccgatgctg aaaaaaaggg gagcttcacc
      961 agcgagccag tctcggagca tggcccgcca agttgataaa gcagtggcat cattcagcgg
     1021 agtactaggt tgaaagtagg acccggagac cattcatgct tccctcgcca gagcttgggt
     1081 g
//
LOCUS       DASRPQ010001199         1357 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3600138, whole genome shotgun sequence.
ACCESSION   DASRPQ010001199 DASRPQ010000000
VERSION     DASRPQ010001199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1357
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3600138"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..259)
                     /locus_tag="VFD73_13720"
     CDS             complement(<1..259)
                     /locus_tag="VFD73_13720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75053.1"
                     /translation="MFSLPLTVLRLVRGAGSGDEGWLAWRLGVRTGSGLVRPLRRVAR
                     RRLRTGWPIRAGGELSRRQVGQGPVAVVGEELLDDSVAAVLF"
     gene            complement(428..>1357)
                     /locus_tag="VFD73_13725"
     CDS             complement(428..>1357)
                     /locus_tag="VFD73_13725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75054.1"
                     /translation="LDLFPSIVQFLMDLARTKPVLLVLGDLHEADAVGLDLIRYLAHL
                     AVGTPLLMVGALREPDIEADAGLRQMIEAMTRERLWLRIDLHCLSRQATDQLVHAMLP
                     SAHVSDDTLAQIYAQSRGNPLFVRELVDGMNAYGSPVTADEGCQDLSWLAARLPARRR
                     ILIGMRLALMDEPLRRVLGLAAAVGATEISLSQLRSGAAALEPPVDIPVLFDALDRAL
                     RLRLIEERGEGYAFRHPVVRAALYDCLPRHRRDELRAALAAPGGKSVRSIDCLSDHSC
                     LPSRHGCLRLLRGFAGRALRHLPEERWNVCNPA"
BASE COUNT          284 a          452 c          420 g          201 t
ORIGIN      
        1 ggaacagcac cgcggccacg ctgtcatcga gcagctcctc gccgaccacg gcgacgggcc
       61 cctggcccac ctgccgtcgg gaaagttcac cgccagcacg aatgggccag cctgttcgaa
      121 gccgcctgcg ggccacccgc cgcagcggcc tgaccagccc cgacccggtc cgcaccccaa
      181 gccgccaggc cagccagccc tcatcccccg aaccagcacc ccggacaagc cgcagaacag
      241 tcagcggcag ggaaaacaca ccctcaaagc cctcaccgtc cagaaaccag ctacgtgaaa
      301 tcagtcggtg gatcgaggct gagagcctgc ttgaaagctc tgaggcgtgg caactacagg
      361 tgcccagcaa cagcagcgag cacgtctcgg tgaaggcgcc cgggattatt tcctctgctt
      421 tctttgctca agccggattg catacattcc agcgctcttc cggcaggtgc cgtaatgctc
      481 ttccagcaaa gccccgtaag agtcgaagac agccgtggcg actgggtagg caggagtggt
      541 cgcttaagca gtcgatcgag cgtacgctct tgccaccggg agcggccaga gcggcacgca
      601 attcatcccg gcgatgccgt ggaagacagt cgtacaaggc cgcgcggacg accggatggc
      661 ggaacgcata gccttcgccc ctttcctcaa tgaggcgtag tcgtagcgca cggtccagcg
      721 catcgaacag gaccggaatg tccaccggag gttccagcgc cgccgcgccg gaacggagct
      781 ggctcaatga gatctcagta gcgccgacgg cagcggccag cccgagcact cgccgcaggg
      841 gctcgtccat gagcgccagc cgcatcccga tgaggatgcg cctacgggcc ggcaatcgtg
      901 cggcaagcca cgagaggtcc tgacagcctt catccgcggt gactgggctg ccgtacgcgt
      961 tcatgccgtc gacaagctcc cggacgaaca gcggattgcc tcgcgactgt gcgtagatct
     1021 gggccaaggt gtcgtcgctg acgtgtgcac tgggaagcat ggcgtgcacc agttgatcgg
     1081 tggcctgccg agacaggcaa tgcaggtcaa ttctgagcca gagacgctct cgcgtcattg
     1141 cctcgatcat ttgccggaga ccagcgtcgg cctcgatatc cggctctcgc aacgccccga
     1201 ccatgagcag cggcgtgccg acggccagat gagccaggta cctgatcaga tcgaggccga
     1261 cggcatcagc ctcgtgcaga tcgccgagga ccagcaggac aggcttcgtg cgagccaggt
     1321 ccatcaggaa ctgaacaatg gaaggaaaga gatcgag
//
LOCUS       DASRPQ010001200         1165 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1720904, whole genome shotgun sequence.
ACCESSION   DASRPQ010001200 DASRPQ010000000
VERSION     DASRPQ010001200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1720904"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..506)
                     /locus_tag="VFD73_13730"
     CDS             complement(<1..506)
                     /locus_tag="VFD73_13730"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI75055.1"
                     /translation="MTSTLAIGDFSRATFLSVRMLRHYHELGLLEPVDVDADSGYRRY
                     APEQIVTAQVIRRFRDLDMPLEDIRAVLDASDVETRNRVIANHLARLESSLAQTQQTV
                     ASVRSLLDRPQDSSVTIGHRHVAATPAALITDIVDTAHVVAWFRGAMGEVAATLSAKG
                     ISPAGPVGG"
BASE COUNT          196 a          388 c          376 g          205 t
ORIGIN      
        1 ccccccacgg gcccggccgg gctgatgccc ttggcggaca gcgtggcggc cacttcgccc
       61 atggctcccc ggaaccacgc cacaacgtgg gccgtgtcaa caatgtccgt gatgagagcg
      121 gcgggcgtgg cggcgacatg gcgatgtccg atcgtgacgc tgctgtcttg gggtcggtcc
      181 agcagactcc gcacggatgc gactgtttgt tgggtctggg cgaggctgga ctcaagacgg
      241 gccagatggt tggcgatcac tcggttgcgg gtctcgacgt cgctggcatc gagcacggcg
      301 cggatgtcct cgagcggcat gtcaaggtcg cggaatcggc ggatgacctg cgccgttacg
      361 atctgctctg gtgcgtagcg ccggtatccg ctgtcggcat ccacgtcgac cggctccaat
      421 agcccgagct cgtggtagtg gcgaagcatc ctcacgctca ggaacgtggc ccgagagaag
      481 tcgccaatgg cgagggtgga ggtcacaccg aattctgggt ctccccctac gtgagagtca
      541 aacgccaatc cgctcttgac cttccctccg cgagagggaa gaggatgttg cttagccgtg
      601 aggagaaatc ccccgggcaa ccgactcatt aggagccggc atggaagcga acgagctact
      661 tcgggttcag catgaggtca cgtccgagcg ggaccctgag aagcgccggg cggcgatcga
      721 ccaggcgagt aaccagcaag gacgcaccgc gcccagccca gatccgccag gttcgagctg
      781 gtgtgcctta aggaggcgta aataccggtt cctcgcgtac tcctttccgt cccgctcgcc
      841 gcacccgccc catctggcag tcctggaacg tcacggcttt gtcagggctg ctcccgccct
      901 ccccggcacc acccggatca ggctgccccc agcttccccg ccctgctgcg acaagacggg
      961 agagaaggcc tttcaccccc tcacggacca acagcgcctc acggcgcaac cctggaagcg
     1021 tggacacttc ccgttagcgg atccttgtca tttcggccgt tttccttact atcgaacgcc
     1081 agttcatctt cggttcctgg cgtccgcttg tgcgccgggc acgggctcac cggacgcgcc
     1141 gcgccctggg cggggcaggc cgggg
//
LOCUS       DASRPQ010001201         1369 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_454841, whole genome shotgun sequence.
ACCESSION   DASRPQ010001201 DASRPQ010000000
VERSION     DASRPQ010001201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1369
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_454841"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1369)
                     /locus_tag="VFD73_13735"
     CDS             complement(<1..>1369)
                     /locus_tag="VFD73_13735"
                     /inference="COORDINATES: protein motif:HMM:NF020243.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HZI75056.1"
                     /translation="TVVSRRAAAEAGEEGGKEVGEEGGEGEDRWVVFEDRQGLGEEVS
                     RRLREAGKQVAVVRQGGRLESSRPGSGRPASGRVESGRVKEYRVDEGRPGDYERVIRE
                     LVAEGRMGKEIVYLWGIGEEEEASDWQGFERMVKLAQGLGGELKSGEVRINVVSEKMQ
                     EVSGEEEIEPGKATVQGVCKVIGQENAKLRCRSIDVRVGEEGSEQRRQVVEQVVGELL
                     SDSSDLVVAYRGHYRSVQTFEPVRGKTGKGKGKDGGLRQGGVYLITGGLGQIGLALAE
                     YLAGAVGARLVLTGRAALPPRQEWANWLATHAAGDAVSRKLGRLLKIEERGGEVLTLA
                     ADVSDAQRMGEVIEEIQRRYGQLNGVIHAAGIVGRESQCAIQESGRQAYEKQARAKVR
                     GVEVLGEVLRGEEVDFCMLMSSLAAVLGGLGFGVYAGVNAYMDSYASRENRRGKTRWV
                     SVNWDG"
BASE COUNT          198 a          613 c          252 g          306 t
ORIGIN      
        1 ccatcccagt tcacactcac ccagcgcgtc ttccctcgcc gattctcccg actcgcataa
       61 ctgtccatat acgcgttgac tcccgcgtac accccaaacc ccagccctcc cagcaccgcc
      121 gccagcgacg acatcaacat acagaagtcc acctcctcgc ctctcaacac ctcgcccagc
      181 acctccactc ccctgacctt ggcgcgcgcc tgcttctcat acgcctgtcg tccgctctcc
      241 tggatcgcac actgcgattc cctgccgacg attcctgccg cgtgaatgac gccgttcaac
      301 tgaccgtagc ggcgctggat ttcctcgatc acttcgccca tgcgctgcgc gtcgctgaca
      361 tcggcggcca acgtcagcac ctcgccgccg cgctcttcta tcttcagcag cctgccgagc
      421 ttgcggctca ccgcatcgcc tgccgcgtgc gtcgccagcc agtttgccca ctcctgccga
      481 ggcggcaagg cggcccgccc cgtcagcacc agccgcgccc cgaccgcgcc ggccagatac
      541 tcagccagcg ccaggccgat ctgccccagc ccgccggtga tcaggtagac gccgccttgg
      601 cgcagtccgc cgtcttttcc ttttcctttt cccgtcttcc ctctcaccgg ttcgaaggtt
      661 tgcacggatc tgtaatgtcc tctgtaagcc acaacgagat cggaggaatc gctgagtaac
      721 tcgccgacca cttgctcaac cacctgccgc cgctgctcgc tgccttcctc tcccactctc
      781 acatctatgc tccgacatct cagcttcgca ttctcctgcc cgatcacctt acaaactccc
      841 tgcaccgtcg cctttcctgg ctcgatctcc tcctctccac tcacctcctg catcttctcg
      901 ctcaccacat tgatcctcac ctccccactc ttcagctctc ctcccagccc ttgcgccagc
      961 ttcaccattc tctcaaaccc ttgccagtcg cttgcttctt cctcttctcc tattccccac
     1021 agatagacga tctctttgcc catccggccc tctgcgacca actcccgaat cacccgttcg
     1081 tagtctcccg gccttccttc atccactcga tactccttca ccctgccgct ctccaccctg
     1141 ccgctcgccg gcctgccgct tcccggcctg ctgctctcca gcctgccgcc ttgccgcacc
     1201 accgccactt gcttgcccgc ttccctcaac ctccgactca cctcttctcc tagcccctgc
     1261 cggtcttcaa acaccaccca gcgatcttct ccctccccgc cttcctcacc aacttccttc
     1321 ccgccttcct cgccggcctc cgccgctgcc cttcgactca ccaccgtcc
//
LOCUS       DASRPQ010001202         1034 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2037703, whole genome shotgun sequence.
ACCESSION   DASRPQ010001202 DASRPQ010000000
VERSION     DASRPQ010001202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2037703"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(87..401)
                     /locus_tag="VFD73_13740"
     CDS             complement(87..401)
                     /locus_tag="VFD73_13740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75057.1"
                     /translation="MYARNVTMHLKPNTVGEFTQTLEKDILPLLRKRSGFADEITFVA
                     QDGKEALAISLWDRQESAEAYARETYPEVLKGLAKVVEGTPEVASFDVSNSTFHKIAA
                     RS"
     gene            553..>1034
                     /locus_tag="VFD73_13745"
     CDS             553..>1034
                     /locus_tag="VFD73_13745"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI75058.1"
                     /translation="MDVPFVIRQRLEDLGLEQRDLARAARVTESYISQLLTRRKAPPA
                     PNRTDIYDRMDRFLRLPSGELARLAELQRKEQLKRELGDEPAALLGEVRELILRKCHP
                     DKERQIRAIFEQQPLGELERLITSKVLEVAKQVARLELDNEYWVRMMAQLGGRSYEEM
                     R"
BASE COUNT          189 a          316 c          339 g          190 t
ORIGIN      
        1 atggtccgag cttaaagaaa gagggcggct gatgccgccc tcctcctctg agacagaccg
       61 gtctacccgc ggcagaccag tcgacgttag ctgcgagcgg cgatcttgtg gaacgtggag
      121 ttggagacgt cgaagctggc cacctcgggc gttccctcga ccaccttcgc cagacccttc
      181 agcacttcgg gatacgtctc gcgcgcgtag gcttccgcgc tctcctggcg gtcccacaga
      241 ctgatggcaa gggcttcctt gccgtcctgg gcaacgaacg tgatctcgtc cgcgaaccct
      301 gagcgcttcc gcagcagggg caggatgtcc ttctcgagcg tctgcgtgaa ctcgcctacc
      361 gtattgggct tcaggtgcat cgtgacgttg cgtgcgtaca tggcgactcc tcggcgacca
      421 acatgaacct cgactccaga cagggcactg cttgagcttg cccaacgtac cgcactttac
      481 tatatttgtc aagtagtgac ccatgtcggt catgcagtgt taccattgct gttaatgagg
      541 gaaggggtcc gggtggacgt gccttttgtg attcgtcagc ggctggagga cctggggttg
      601 gagcagcgcg acctcgcccg cgcggcccgc gtgaccgagt cgtacatctc gcagctgctc
      661 acgcggcgca aggcgccccc cgccccgaac cgcaccgaca tttacgaccg gatggacaga
      721 ttcttgcgat tgcccagcgg ggagctggcc cggctggcgg agctccagcg gaaggagcag
      781 ctgaagcggg agttgggcga cgagcccgcg gcgctgctgg gggaagtccg cgagctcatc
      841 ctgcggaagt gtcaccccga caaggaacgt cagatccgcg cgatcttcga gcagcagccc
      901 ctgggcgagc tggagcggct gatcacgtcg aaagtcttgg aagtggcgaa gcaggtggcg
      961 cggctggaac tggacaacga atactgggtc cgcatgatgg cccagctcgg cggccgcagc
     1021 tacgaagaga tgcg
//
LOCUS       DASRPQ010001203         1033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2959990, whole genome shotgun sequence.
ACCESSION   DASRPQ010001203 DASRPQ010000000
VERSION     DASRPQ010001203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2959990"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..306)
                     /locus_tag="VFD73_13750"
     CDS             complement(<1..306)
                     /locus_tag="VFD73_13750"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI75059.1"
                     /translation="MSLDAAVRLTLGPLDLDMAVTVEEGEVVALLGPNGAGKTTLLRA
                     IAGLVPFRSGHVRLDGKVLEDTTTREYVPTERRPIGFVFQDYLLFPHLTVAENVAFGL
                     "
     gene            complement(303..>1033)
                     /locus_tag="VFD73_13755"
     CDS             complement(303..>1033)
                     /locus_tag="VFD73_13755"
                     /inference="COORDINATES: protein motif:HMM:TIGR01581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI75060.1"
                     /translation="FFIVPLVGLIVRSPWGDALTALTAPETLEALKLSLIASLSATAV
                     ALVLGVPLAWVYARVAFPGRDLLRALTTLPMVLPPVVGGIALLLAFGRRGLLGAWLNS
                     TFGITFPFTTVGVIMAETFVAMPFLILTVEAGLRSMDRRYEEAARALGANRWRVFTRV
                     TLPLIGPSLFAGAVLCWARALGEFGATITFAGNFPGVTQTMPLAVYLLLETNQEASFI
                     LSLLLLLVSLLVLVGLRDRWLGSA"
BASE COUNT          229 a          332 c          341 g          131 t
ORIGIN      
        1 cagaccaaag gcgacgttct ccgccaccgt gaggtgcggg aacaacagat agtcctgaaa
       61 cacaaagcca atgggccgtc gctccgtggg gacgtactcg cgtgtggtgg tgtcctccag
      121 gaccttccca tccaggcgca cgtgacctga gcgaaaggga accagtccag cgatggcgcg
      181 cagaagggtg gtcttaccgg ccccattcgg gccgagcaga gccaccacct ctccttcctc
      241 gacggtgact gccatgtcga ggtcgagggg tccgagagtg agacggacgg cggcgtcaag
      301 gctcacgcgg atccgagcca gcgatccctg agtccgacca gtaccaacag cgagacgagg
      361 agaagcagca ggctcaggat gaaggaggct tcctggttgg tctccagcag gagatagaca
      421 gccagcggca tcgtctgcgt aacccccggg aaattgccgg cgaaggtgat cgtggcgccg
      481 aactccccca acgcgcgtgc ccagcacagc acggcgccgg cgaacagcga aggaccgatc
      541 aggggcaagg tgacacgggt gaacaccctc cagcgattgg cccccagcgc gcgcgcggcc
      601 tcttcatacc tgcgatccat cgaacgcaga cccgcttcca ccgtcaggat gaggaaaggc
      661 atcgccacga aggtctcggc catgatcacg ccgacggtgg tgaatggaaa cgtgatgccg
      721 aaggtgctgt tgagccatgc ccccaggagc ccacgccggc cgaaagccag cagcagcgcg
      781 atgccgccga ccaccggtgg aagcaccatt ggcaacgtcg tcaaggcgcg aagaagatcg
      841 cggcctggga atgcgactcg ggcgtagacc caggccagcg gcaccccgag aaccagcgcc
      901 accgccgtcg ccgacaggga tgcgatcaac gacagcttga gggcctcgag cgtctccgga
      961 gcggtgagcg cggtcagggc gtctccccac ggagaccgga cgatcagccc gaccaggggc
     1021 acgatgaaga atg
//
LOCUS       DASRPQ010001204         1393 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2038096, whole genome shotgun sequence.
ACCESSION   DASRPQ010001204 DASRPQ010000000
VERSION     DASRPQ010001204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1393
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2038096"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..443)
                     /locus_tag="VFD73_13760"
     CDS             complement(<1..443)
                     /locus_tag="VFD73_13760"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI75061.1"
                     /translation="MLGTTLPTPLYVLWQEHYRFPDVIITILFAAFTLGMLMALVFLG
                     RVSDHFGRRPVLLGALGVACASTLLFVLAQQVLMLLAGRFLSGLAAGLLTGTAPAGLA
                     EFQPSGNLRQAGQLATAINLGSLGLGALVAGLFAQFGPAPTQLMF"
     gene            complement(994..1290)
                     /locus_tag="VFD73_13765"
     CDS             complement(994..1290)
                     /locus_tag="VFD73_13765"
                     /inference="COORDINATES: protein motif:HMM:NF040451.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6510 family protein"
                     /protein_id="HZI75062.1"
                     /translation="MGTTTDTSDESLRLDGNAAAGMLAEIFAVEMSSAQVTCAHCGRT
                     GSLGSLLMYGGQIGTVLRCPTCDAVQLRIARIHEQYWMDLRGMATMRIAPASPA"
BASE COUNT          272 a          453 c          428 g          240 t
ORIGIN      
        1 tcgaacatca gctgcgtcgg agccggccca aactgcgcga acagtccagc cacaagagca
       61 cctagtccca agctccctag gttgatggcg gttgccagct gccctgcctg gcgcagattg
      121 ccactcggct ggaactcagc caggccagca ggcgctgtcc cagtcaggag cccggcggcc
      181 aagccagaca ggaatcgccc agccagcagc atcaggacct gctgcgcaag gacgaagagc
      241 agagtactgg cgcaggccac gccgagcgct cccagtagga ccgggcgacg cccgaagtgg
      301 tcggagacgc ggcccaggaa gacgagtgcc atcagcatgc ccagcgtgaa ggctgcgaag
      361 aggatagtga tgatgacgtc aggaaaccga tagtgctcct gccagagtac gtagagcggg
      421 gttggcaagg tcgtgccgag catccctgta gcgaacactc cggctagcac aaggtacgcc
      481 gagaggtggg ggtgcgggta gtggcgctgc gttacccgta tatcgaggtg gtcgatgcac
      541 cgcacctggt ctgttggggg ccgtctcctc ggcgttttat acaccttgcc cacaagctac
      601 ctctagtggc gcagttgacg tcgcatgccc aatacgtgcg agatcgaacg ctgcctagcc
      661 gatgtggagc gcaccccacg ccgctgcctt ggtgaggtgc tcacggtgac cgcggacgca
      721 gcaaggccac gccaccgtgc cggtcatgct gtcccagacc atattggtcg tccggatcga
      781 ggactatgag acctagctcc aacccacggt catgtttggc cagcgatgca gattcggtca
      841 caagaacact atgtgcacca gtggctaccg agcggcgtgc gggggctgcc agtacatcct
      901 agagcctggt ccaagccgac gggtacgcgc gccggtaacc cgaaccgccc ctagcctatg
      961 cgcgggatgt ctgctagacg cccatcgcca tcctcacgcc ggactggccg gagcgattcg
     1021 catcgttgcc atgccgcgca gatccatcca atactgctca tggatgcgcg cgatgcgcag
     1081 ctgaacagca tcgcacgtcg ggcagcgcag gacggtgccg atctgaccgc cgtacatcag
     1141 caaactgccg agcgaccccg tgcgtccaca gtgcgcacaa gtgacctgcg cactgctcat
     1201 ctcaaccgcg aagatctcgg ccagcatgcc ggctgcggcg ttgccgtcga gccggagtga
     1261 ctcatcgctt gtgtccgtcg tcgtgcccat cgtgtttcta tcggccatcg ggcttcctcc
     1321 atcatagatg tcgctcctgt cgctcaaatc gctcacgtct cacctccggt tggcccgaag
     1381 cgctcggtct tga
//
LOCUS       DASRPQ010001205         2113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4540350, whole genome shotgun sequence.
ACCESSION   DASRPQ010001205 DASRPQ010000000
VERSION     DASRPQ010001205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4540350"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..549)
                     /gene="chrA"
                     /locus_tag="VFD73_13770"
     CDS             complement(<1..549)
                     /gene="chrA"
                     /locus_tag="VFD73_13770"
                     /inference="COORDINATES: protein motif:HMM:TIGR00937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate efflux transporter"
                     /protein_id="HZI75063.1"
                     /translation="MSRGYLAGYFLRLGAVGFGGPIALVGHMHHDLVEARRWISEDEY
                     REGLALAQLSPGPLAAQLCFYIGYLRGGISGAALSGLAFVVPSFLMVLALGWAYVRYG
                     GLPWMQAVFYGVGASVIGLISRSAYGLARKTIGRDLLLWAILVVVALTTAITGREIIS
                     LIVVAGALVWLVRAPPEALRRRS"
     gene            complement(1162..1380)
                     /locus_tag="VFD73_13775"
     CDS             complement(1162..1380)
                     /locus_tag="VFD73_13775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75064.1"
                     /translation="MKSYRSGPPFLANGAIGFRYAAVRNRLGSPKTDAQRPIYVSAIR
                     YAASLGLLGTLIQIVPVFRLLGCLQPLV"
     gene            complement(1457..>2113)
                     /locus_tag="VFD73_13780"
     CDS             complement(1457..>2113)
                     /locus_tag="VFD73_13780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75065.1"
                     /translation="REALAAAIRREIPALRAPEELRTQLRESLRTAAQTKGARATMRF
                     PRWRQFALAASLAFVALGAWGLGTRRGADAALRDQVLASHIRSLMPGHLTDVVSSDQH
                     TVKPWFNGKLDFSPPVSDFAGRGYPLLGGRLDYVAGRPVAALVYQRRQHLINVFLWPA
                     ADGERGERTPTTRQGYHLLHWTSSGYEYWVVSDLGLQELEQFAALLRQSEAAVVQYPH
                     "
BASE COUNT          435 a          688 c          689 g          301 t
ORIGIN      
        1 gctgcgccgg cgcagggcct ctggtggtgc gcggaccagc cagaccagcg cgccggcgac
       61 aacgatcagg gagatgattt cccgcccggt gatcgcggtg gttagggcga ccaccacaag
      121 aatcgcccag agcaggagat ctcgaccgat ggtctttcgg gccaggccat acgcactccg
      181 gctgatcagg ccgatcacgg aggcgccgac accgtagaac accgcctgca tccagggcaa
      241 accgccgtat cgcacgtaag cccagccgag cgccaggacc atgagaaagc tgggcacgac
      301 gaaggcaagg ccagagaggg ccgcgccgct gatcccgcca cgaaggtatc cgatatagaa
      361 gcagagctgc gccgcgagtg gacccggcga cagttgcgcc aacgcgagtc cctcacggta
      421 ctcgtcttcg ctgatccagc ggcgggcctc cactagatcg tgatgcatgt ggcccaccaa
      481 cgcgatcgga ccgccgaagc caaccgctcc gagccgaagg aagtagcccg ccaggtaacc
      541 gcgcgacacc actggaggcg cctgggtcat acactaccag tcggtgcgag ggaggccggc
      601 ggcgcgagca cagtctaatg cgctggctca gcaggcactg ccggagaggc cgtcccgccg
      661 gctggccggg gggccggggc gccgggaggg tcaccaagat agaagtaacc aggagtatca
      721 atgtagccac actcaactcc atgaccgacg agcgccggat caagccggct gcctcttcgc
      781 tgccgagtcg cggccgctgc cggcgccagt tccaggcgcc cagcgagaac acaacggcca
      841 ctagacacaa cttgatcagg agggcgtagc cgtacggcgt actccacagc gcggaaaagg
      901 ggtgcaggtg catcagggcg gtggtcaccc ccgtagccac aagtaatgga ccgcatgtga
      961 gcgcgagcgg cgagaagccg ttcaccatgt ccttgaccat gggaccccgc tccgcgcgag
     1021 gagcgtcacg cagaacaacc gccagtccgg caattacgag cacgtgcaac gttcccagcc
     1081 agagcccggc tagcagttgg tgcaccggat ttatgaggcg atcccatcga cccgagagga
     1141 taccggagag ctccgcgccg atcacaccaa tggctgcaag cagccaagca gtcgaaacac
     1201 cggaactatc tggatcaggg tcccgagtaa gccgaggctc gcagcataac ggatggcgct
     1261 gacgtagatg ggacgctggg catcggtctt gggcgagccg agccgatttc gcacggcggc
     1321 gtaacgaaac ccgatcgcgc cattcgcgag aaagggggga cccgaacgat acgacttcac
     1381 gagcctatac tacggccccc caatgcgcct gttggtgatc aggtccacga ccatcccgac
     1441 gcatacagcc cagagctcag tgaggatatt ggacgacggc agcttcgctt tgccggagca
     1501 gcgcggcgaa ttgctccagc tcctggagtc ccaggtccga gacgacccag tactcgtagc
     1561 cactgctggt ccagtgcaga agatgatatc cctggcgggt ggtcggcgtg cgctcacccc
     1621 tctccccgtc ggcagccggc cagaggaaca cattgatgag atgctggcgt ctctgataga
     1681 ccagcgcggc aacggggcgg ccggcgacgt agtccagtct tccgcccagc aggggatagc
     1741 ccctcccggc gaagtccgag accggcggcg aaaaatcgag ctttccgtta aaccagggct
     1801 ttacggtatg ctggtcggat gagaccacat cggtcaggtg gccgggcatc agggagcgga
     1861 tgtggctcgc cagcacctgg tcgcggagcg ccgcatcagc tccgcgacgg gttccgagtc
     1921 cccacgctcc cagtgcgacg aaggccagac tggccgccaa agcgaactgt cgccagcggg
     1981 ggaatcgcat tgtggccctc gcgcccttgg tttgggcggc ggtcctgagg ctctcgcgaa
     2041 gctgagtccg gagctcctcg ggcgcgcgca gcgccggaat ttccctcctg attgccgccg
     2101 ccagggcttc acg
//
LOCUS       DASRPQ010001206         1247 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_141255, whole genome shotgun sequence.
ACCESSION   DASRPQ010001206 DASRPQ010000000
VERSION     DASRPQ010001206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141255"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(83..226)
                     /locus_tag="VFD73_13785"
     CDS             complement(83..226)
                     /locus_tag="VFD73_13785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75066.1"
                     /translation="MTAREDQIRQVLAELEGHIAEVEASVTVLKALLADGEAPGDEGP
                     QVT"
     gene            complement(223..711)
                     /locus_tag="VFD73_13790"
     CDS             complement(223..711)
                     /locus_tag="VFD73_13790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75067.1"
                     /translation="MTDVTSEKLRRWREAQGWDVPRMARELRKAAKVSGEDVAAHHGL
                     VKMIPQWERGDRAPRERYRLLYLKVFKDALGDLSHGMGLATDLAIRLAEVRSHAASLP
                     ASGEIRALEASVLARPRKTMTSAEIRALAVEAIAHLHKVADKLAELSALLADDEPGEG
                     KP"
     gene            1031..1240
                     /locus_tag="VFD73_13795"
     CDS             1031..1240
                     /locus_tag="VFD73_13795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75068.1"
                     /translation="MRPHRYRIIVSGTLGELTRQVFEDLRVESDGANTGLCGELDQAG
                     LFGVLARILEFGLELVALSRLDDES"
BASE COUNT          180 a          430 c          397 g          240 t
ORIGIN      
        1 cagtgaccac caccaccgga ccctcaccgg gccgcgcgct gtgcccggat tcggttccgg
       61 ccgctgcctg ttggcggcgt ctttaggtca cctgggggcc ttcgtctccg ggggcttcgc
      121 cgtcggccaa gagcgctttg aggactgtga cgctggcctc gacttcggcg atgtgaccct
      181 ccagttcggc cagaacctgt ctgatctggt cctcacgcgc ggtcatggct tgccttcgcc
      241 tggctcgtcg tcggcgagca gcgccgacag ttccgcgagc ttatcggcga ccttgtgcag
      301 gtgggctatc gcctccacgg ccagggcgcg gatctccgcg gacgtcatgg tcttccttgg
      361 cctggccagg acgctggcct ccagtgccct gatctcgcca gaggctggca ggctggcggc
      421 gtgcgagcgg acctcggcga gccggatcgc cagatcggtg gccaatccca tgccgtgcga
      481 caggtcgccc agcgcgtctt tgaaaacctt caggtacagc agccggtacc gctcgcgggg
      541 ggcacggtcg cctcgttccc actgcgggat cattttcacc aggccatgat gggctgctac
      601 gtcctcgccg gaaaccttgg cggccttgcg cagctcacgt gccatccgcg gcacgtccca
      661 gccctgggct tcacgccacc ggcgcaattt ttcgctcgtc acatcggtca acgcacgcat
      721 cctcgcgcac cgagggacag tggcgggtcg cgtacccgct ccccttcgct cccgttcgct
      781 ccctcgattt tgccatgccg tgccgtaaac ctgcatttaa ctggcacggg cgctggggtg
      841 cacaggtgag cgagcctcgg gggggcttgt gtgctccagc gttcaccgat gcccgcgacc
      901 ctgtcttgat cccgccagcc gccccgaaac tagccggcta gcgcaggagg cgttgaccag
      961 tagcgacctg atccaagcct gttcggcccg gatcggcatg cccggccgcc cctacccctg
     1021 aggaagcagc gtgagacccc accgttaccg gatcatcgtg tctggcacgc tgggtgagct
     1081 cacccgccaa gtgttcgaag atctccgcgt cgaatccgac ggcgcaaaca cagggctgtg
     1141 tggcgaactg gaccaggcag gcctgttcgg cgtgctggcc cgcatcttgg agtttggctt
     1201 ggagctagtg gcattgagcc gcctggatga tgaatcctga gaccgga
//
LOCUS       DASRPQ010001207         2134 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3296368, whole genome shotgun sequence.
ACCESSION   DASRPQ010001207 DASRPQ010000000
VERSION     DASRPQ010001207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2134
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3296368"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..650
                     /locus_tag="VFD73_13800"
     CDS             <1..650
                     /locus_tag="VFD73_13800"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HZI75069.1"
                     /translation="TLNDAAYVGLPEIRGVVVKDIPSDDSPAKAAGIEPGDVIIAVDG
                     KPVERVGQLQQVIGFRKPGDVVKVEVARKGGVRKTFSVKLQALNDQPQVAANTEGEGD
                     TAGDNGGTAMNRLGISVEPVTPDVAQQLQLPNNMRGLVVTDVTPGGPSWETLLDDPQR
                     NGPDIILSVEGKPVRTEADLRNALKAQKPGSIVTLGIYNPRAQGKRVERIKLSDR"
     gene            858..1556
                     /locus_tag="VFD73_13805"
     CDS             858..1556
                     /locus_tag="VFD73_13805"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HZI75070.1"
                     /translation="MSISGMIFDVDGTLVDTNPAHVEAWRRAFLKMGHQVPTSRIVLE
                     IGKGGDLLVPSVLGEQAEEREGEALRKRQKEEFLAIARKERFRLFPGAREIFPALRER
                     GVLTALATSSNDKHLEATLASAGVDLRRLADKVVTKTEDQTSKPAPDLIVAAVEELQL
                     PAASCAMVGDTVYDGAACRKAGVTFFGVLSGGTPESALREAGARIVFADVAAMLEQLD
                     RTLETAVLDAAAQP"
     gene            1589..1858
                     /locus_tag="VFD73_13810"
     CDS             1589..1858
                     /locus_tag="VFD73_13810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75071.1"
                     /translation="MTTSEETDWMNHPAIRKLVDQANLLALEERITLVKGLIPNIANA
                     LSEDEYEQFVTYVRLKGERYLEAKSHPGTGRAERHTPGDRQLEGR"
     gene            1883..>2134
                     /locus_tag="VFD73_13815"
     CDS             1883..>2134
                     /locus_tag="VFD73_13815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75072.1"
                     /translation="MRNWITWTAVAGLVSGVAGCSREPHDVAAASRKTESPIEKKLAQ
                     YTSVRLTTDLSKLTAHERQMIPLLIDAAKAMDAIFWRQAY"
BASE COUNT          455 a          623 c          685 g          371 t
ORIGIN      
        1 ttaccctgaa cgatgccgct tacgtcggcc tgcccgagat tcgaggcgtg gtggtgaagg
       61 acatcccgag tgacgactcg ccggcgaaag cggcggggat cgagcctggc gatgtcatca
      121 tcgcagtcga tgggaagccg gttgaacggg tcggtcagct gcagcaggtg atcggtttcc
      181 gtaagccggg agacgtggtc aaggtggagg tcgcccgcaa aggcggcgtt cgcaagacgt
      241 tcagcgtcaa gctacaggcc ctgaacgacc agccgcaggt ggccgcaaac accgagggag
      301 agggcgacac cgcgggcgat aacggcggaa cggcgatgaa ccgcctcgga atcagcgtcg
      361 agccggtgac ccccgatgtc gcgcaacagc tccagctgcc taacaacatg cggggactgg
      421 tagtgaccga tgtgactccg ggtggcccat cctgggagac gctgttggac gatccgcagc
      481 ggaacggacc ggacatcatc ctttcggtcg aaggcaagcc ggtaaggacg gaagctgatc
      541 tccggaacgc actcaaggcc cagaagccgg gcagcatcgt caccttgggc atttacaatc
      601 cccgggcaca gggcaagcga gtagagcgga tcaagttgag cgataggtaa ggagacgacg
      661 gaacgacgga acgacggaac gacggaacga gccaagatta atcccgaaga gccctccgca
      721 cacatttcgg agggtttttc gtatcctcgt tcctcacgtt gccttcggcg acctcgcctg
      781 ccgctcggtt cctcacgttc cgtcgttccc cacgttccgc acgttcccca cgttcctccc
      841 ctcagctaac ttgggtcatg tctatctctg gaatgatttt cgatgtcgat ggcaccttgg
      901 tggataccaa tcccgctcac gtcgaggctt ggcgcagggc atttctgaag atgggccacc
      961 aggtacctac ctcccgaatc gtgctggaga ttgggaaggg tggggatctg ctggtgccct
     1021 cggtccttgg tgaacaggca gaagaacgcg aaggggaggc gctccgaaag cgccagaagg
     1081 aagagtttct ggcgattgcc cggaaggaac gctttcggct gtttcccggc gctcgagaga
     1141 tttttccggc gctccgcgag cgcggcgttc tgaccgcgct cgccacctcg agcaacgaca
     1201 agcacttgga ggctacgctg gcgagcgccg gtgtggacct gcggcggctg gccgataagg
     1261 tcgtgaccaa gactgaggac caaaccagca agcccgcgcc ggatctcatc gtggccgcag
     1321 tcgaggagct ccagttgccg gcagccagct gcgcgatggt gggcgatact gtgtatgacg
     1381 gcgcagcctg ccggaaagcc ggtgtcactt tctttggcgt cctatccgga ggcacacccg
     1441 agtcggcatt gcgggaggct ggagcgcgaa tcgtgttcgc tgatgttgcc gcgatgctgg
     1501 agcagctgga tcgaaccctg gaaaccgccg tgctcgacgc cgcggctcaa ccttaggact
     1561 ttactcatct agccaggagc aacgcccaat gaccaccagc gaagaaactg attggatgaa
     1621 tcatccagcc atccgaaaac tggtggacca ggcgaacctg cttgcgctgg aggagcggat
     1681 taccctcgtg aaaggtctga ttccgaatat tgcgaatgct ctctccgaag acgaatacga
     1741 acagttcgtg acctatgttc gactcaaagg cgaacgctac ctcgaggcca agtcgcaccc
     1801 cggcactggt cgggccgaac gccatacgcc aggggaccgg caactggaag gcaggtagtc
     1861 gggggagcac tggggaggct gaatgaggaa ctggataacc tggacggcag tcgccggact
     1921 ggtttcgggc gtggcgggat gtagccgaga gccacacgac gtcgctgcag catccaggaa
     1981 aaccgagtca ccgatcgaaa agaaactggc ccagtacacc tccgttcgcc tgaccaccga
     2041 tctgtcgaag ctgacggcac acgagcggca gatgatcccg ctcctgatcg atgccgccaa
     2101 ggccatggat gcgatcttct ggcggcaggc atac
//
LOCUS       DASRPQ010001208         1140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2672618, whole genome shotgun sequence.
ACCESSION   DASRPQ010001208 DASRPQ010000000
VERSION     DASRPQ010001208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1140
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2672618"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            123..284
                     /gene="rpmH"
                     /locus_tag="VFD73_13820"
     CDS             123..284
                     /gene="rpmH"
                     /locus_tag="VFD73_13820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HZI75073.1"
                     /translation="MKPSYRPRNKRRITKHGFRARMATRWGRAVLSRRRKKGRKRLTV
                     SLPSKHGGR"
     gene            281..634
                     /gene="rnpA"
                     /locus_tag="VFD73_13825"
     CDS             281..634
                     /gene="rnpA"
                     /locus_tag="VFD73_13825"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: protein motif:HMM:NF013022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HZI75074.1"
                     /translation="MTPAARFPRAHRLARASDIRSCLAHGRRRRYEHLDVIWMDNSTG
                     RPRVGLIVPKFQSSAAARNRLRRRLREIWRRDLQSRQPGWDVIIRARREAYQADFAAL
                     RSELLAWGTSVLTKG"
     gene            638..865
                     /gene="yidD"
                     /locus_tag="VFD73_13830"
     CDS             638..865
                     /gene="yidD"
                     /locus_tag="VFD73_13830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002474682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HZI75075.1"
                     /translation="MSPSRLPRQCLAGLIRGYQLLVSPLLPPSCRFTPSCSQYALEAV
                     TRHGACRGGWLAARRLARCHPFHPGGFDPVP"
     gene            882..>1140
                     /locus_tag="VFD73_13835"
     CDS             882..>1140
                     /locus_tag="VFD73_13835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75076.1"
                     /translation="MDRRTIWAILLMMVIAIAPAIFLKRPAPGGAAGRRDSEAAAVSR
                     DSSGQPPAAPRALADSTLVPAQDSVRVAPPAGRTPPPGTASE"
BASE COUNT          165 a          402 c          348 g          225 t
ORIGIN      
        1 gatttctgat cgagcttctc cgtcttcttc gtcctttccg ttcgctccct ctgctcgctc
       61 ggcttgaccc tcttcctctc tcccgactaa tttccccggc tcactttgga ggatgccctc
      121 gtatgaagcc atcgtatcgg ccgcggaaca agcgccgcat caccaagcac ggatttcgcg
      181 cccggatggc cacccggtgg ggccgagccg tcctctcacg gcgccggaag aaggggcgca
      241 agcgtctcac tgtctcattg ccgtcgaagc acggaggccg ctgacgcccg cggcgcgctt
      301 cccgcgggct catcggctcg cgcgcgcgtc agacattcgc agctgcctcg cccacggaag
      361 gcgccgccga tacgagcacc tggacgtaat ctggatggac aattcaacgg gtcgaccgcg
      421 agtgggactg atcgttccga agttccagtc atcggcggca gcccgcaatc gtctgcgccg
      481 ccggctgcgg gaaatctggc ggcgggatct gcagtccagg cagccgggat gggatgtgat
      541 catccgcgcc cggcgtgagg cctaccaggc cgatttcgct gcactccgat cagagctcct
      601 tgcctggggc accagcgtgc tcaccaaagg atgagcggtg tcgccttcac gactaccgcg
      661 ccagtgcctg gcaggactga ttcggggata tcagctgctg gtctcgccac tgcttccgcc
      721 cagttgccga tttactccct cctgttctca atatgcgctc gaggcggtga ctcgccacgg
      781 tgcctgtcgc ggaggctggc tggctgcccg ccggctggct cgctgccatc cctttcatcc
      841 gggtggcttc gatcccgttc cttgatcctg tgaactgagt tatggaccgt cgtacgatct
      901 gggccattct cctgatgatg gtgatcgcca tcgcccctgc catcttcctc aagaggccgg
      961 cacccggtgg ggcagcgggg cggcgggaca gcgaggctgc cgcagtgtcg cgagacagct
     1021 caggccagcc gccagccgct ccccgcgcgt tggccgactc caccctcgtg cctgctcagg
     1081 acagcgttcg cgtcgccccc cccgcgggcc ggactcctcc accggggact gctagtgaag
//
LOCUS       DASRPQ010001209         4150 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2672805, whole genome shotgun sequence.
ACCESSION   DASRPQ010001209 DASRPQ010000000
VERSION     DASRPQ010001209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4150
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2672805"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..645
                     /locus_tag="VFD73_13840"
     CDS             <1..645
                     /locus_tag="VFD73_13840"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HZI75077.1"
                     /translation="TLETRLGVFADFQPRLPDSFRTARFLFLGNIDPDLQLGVLEQVH
                     RPELVVCDTMNYWIQSKKPALLQLLSRVDVLMVNDSEARELSGDWNIHRAGRWILRQG
                     PTRVVIKQGEHGALLIEPKRTFYVPAYPLENVFDPTGAGDAFAGGFMAYLARTRSVAE
                     DNVRRAMVYGAAMGSYAVEQFGIRGFERVSLGDVEKRVRAFQDLTHVALAEAVG"
     gene            642..1679
                     /gene="purM"
                     /locus_tag="VFD73_13845"
     CDS             642..1679
                     /gene="purM"
                     /locus_tag="VFD73_13845"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HZI75078.1"
                     /translation="MIAHEAREYAAAGVDLDTAETAKARIGQLVAGTRTALSTGAVGA
                     FGGMVRLPAGLQRPVLVLSTDGVGTKVLVALEAGRFDTVGEDLVNHSVNDILVHGATP
                     IAFLDYIAGSGLEVEQVAGLVEGIARGCRNHEMALAGGETAQMPGLYRTGTYDLAGTI
                     VGVVEEDRALHGDSIAPGDLLLGYASTGLHTNGYTLARRVIFERMKLGIGDELKGTGR
                     TVADALLAVHRSYSRAVTPILSRLHGLAHITGGGIPGNLVRILPQNCTAVVDPGTWEW
                     PPLFSILQQAGQISTQEMRDVFNLGVGLVAVLPPEAVSAVQAAATEDGVTTWVMGEIQ
                     RGSRTVRFARP"
     gene            1691..2647
                     /locus_tag="VFD73_13850"
     CDS             1691..2647
                     /locus_tag="VFD73_13850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75079.1"
                     /translation="MRSVYVMVGLLLVGVALPAGAQAPECANYSGNPERVCTAAVDGS
                     RAFHPLFGMLVSGGNPTIGSAATLGGLGHASLTVRANAVNMVLPNLGYDGSSSTVPAG
                     DKLWVPAPLVEGALGLYRGMGAGLLAIDFLGSAQLLPTTQIDNLTVDQNARRIGSIAL
                     GLGYGARVGLLRGLGPLPDVSVSLMRRDIPQITYGDVNTGDDYSYGLDLHATNLRLIA
                     SKQIAVLDVAAGLGWDKYTGDAVVQFRDPVTTAIQPNVPLSLSSSRVLGFVNAGLSMS
                     MVRLTGEVGYQGGKDQNLSTSFEDFDTTKGKLFAGLGLRVSF"
     gene            2655..3728
                     /gene="ribD"
                     /locus_tag="VFD73_13855"
     CDS             2655..3728
                     /gene="ribD"
                     /locus_tag="VFD73_13855"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: protein motif:HMM:TIGR00326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HZI75080.1"
                     /translation="MNEREAMARALDLAWRGWGRVQPNPLVGAVVLQNGEPVGEGWHP
                     EFGDRHAEAVALARAGERARGATMVVTLEPCSHQGKQPPCTEAIIRSGIRRVVAALPD
                     PNPAAAGGGDRLREAGVEVELGPLSDAAAAQNAIFLHSLAPTTHPYVALKLATTLDGR
                     IADGYGRSRWISGAESRDYVQWLRAGFDAIAVGGRTARLDDPSLTVRGKVQPRVPPRR
                     VVFDSAADLGPQLTLIRTASEVPTLAVVSPKADVSRVKRLEAGGVTVLRAGTLDESLQ
                     SLYGLGIRSLLIEGGGQLAGALMGAGLVNRYYWFQSPLWLGDGGVPALAGLPSRHLEQ
                     AQRWRVIERQVLGEDTLLVLDRP"
     gene            3729..>4150
                     /locus_tag="VFD73_13860"
     CDS             3729..>4150
                     /locus_tag="VFD73_13860"
                     /inference="COORDINATES: protein motif:HMM:NF012881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HZI75081.1"
                     /translation="MFTGLISATGQVQRAQRNADGLELTISAPYTDLTEGESVAVDGA
                     CLTVQSLSAGGFTSHIIRTTLDRTRFADYAPGRRVNLERALRVGDRLGGHLVQGHVDG
                     VGTVAQVQEREDARLLDLQVPAEIARLSVPLGSITVDGV"
BASE COUNT          706 a         1307 c         1389 g          748 t
ORIGIN      
        1 accttggaga cccgcctcgg cgtcttcgcc gattttcagc ccagacttcc cgactccttc
       61 cgaacggcgc ggtttctctt cctcggcaat atcgatcccg atctgcagct cggcgttctc
      121 gagcaggtgc accgtccgga gctggtggtg tgtgacacca tgaattactg gatccagagc
      181 aagaagccgg cgctgctgca attgctctcc cgagtcgacg ttctcatggt caacgacagc
      241 gaagcacggg agctgagtgg cgactggaac atccaccggg caggacgctg gattcttcgg
      301 caaggcccca cgcgggtggt catcaagcag ggggaacatg gcgcgctgct gatcgagccg
      361 aaacgcacct tctacgttcc ggcgtaccct ctggagaatg tcttcgatcc cactggtgcc
      421 ggcgacgcct ttgccggagg gttcatggct tacctcgcac gtacccgctc ggtggcggag
      481 gacaacgtgc gccgggccat ggtgtacggc gccgcgatgg ggtcctatgc cgtcgagcaa
      541 ttcggcatcc ggggcttcga acgggtgagc ctgggcgacg tggaaaaacg ggtacgcgcc
      601 ttccaagacc tgacccacgt cgcccttgcg gaggcggtcg ggtgatagca cacgaggcca
      661 gggagtacgc tgctgccggg gtagacctgg acacggccga gacggcaaag gcgcggattg
      721 gccagttggt agctgggacc cgcactgccc tttccaccgg cgcggtgggc gcattcggag
      781 gcatggtccg acttccagcg ggactgcaac gaccggtgct ggtcctgagc accgacggtg
      841 ttggtaccaa ggtgctggtg gcgctcgagg ccggacggtt cgacaccgtc ggcgaagacc
      901 tggtcaatca cagcgtcaac gacattctgg tccatggcgc cacccccatc gcctttctgg
      961 actacatcgc gggatcgggt ctggaggtgg agcaggtcgc cgggttggtc gagggaatcg
     1021 cccgcggatg ccgcaaccac gagatggcgc tcgccggcgg tgagaccgcc cagatgcccg
     1081 ggctttaccg gacaggcacc tatgatctgg ccggaaccat cgtgggagtg gtcgaggagg
     1141 atcgcgctct gcacggcgat tcaattgcgc ccggagacct cctcctgggc tatgcgtcta
     1201 ccgggctgca caccaatggc tatacccttg cccgccgggt gatcttcgag cggatgaagc
     1261 tcggcatcgg agatgaactg aagggaaccg gtcggaccgt cgccgatgcg ctgctggcgg
     1321 tgcaccgaag ctactcccgc gccgtcaccc ctatcctcag ccgcctccac ggcctggcgc
     1381 acatcaccgg gggaggaatt ccaggtaacc tggtgcggat attgcctcag aactgtacag
     1441 cggtggtcga tcccggtacc tgggaatggc cgccgctctt cagcatcctg cagcaggcgg
     1501 gacagatctc cacccaggaa atgcgtgatg ttttcaatct tggagtgggt cttgtcgccg
     1561 tactgccccc cgaggctgtc tcggcggtgc aggccgccgc gaccgaggac ggggtcacca
     1621 catgggtgat gggcgagatc cagcgaggca gccggaccgt gcgtttcgcc cgtccgtaag
     1681 ggagaatacg atgcgctccg tttacgtcat ggtcgggctg ttactggtcg gggtcgcctt
     1741 gcccgccggt gcccaggcgc ccgagtgcgc caactactcc ggaaatccag agcgggtctg
     1801 taccgctgca gtcgatggca gccgggcgtt tcatccgctc ttcggcatgt tggtcagtgg
     1861 aggaaacccg accatcgggt ctgcggcaac gctcggtggt ctgggacacg cttcgctgac
     1921 cgtccgcgcc aatgccgtca acatggtact gcccaacctc ggctacgacg ggagcagctc
     1981 caccgttccc gctggtgaca agctgtgggt acctgctcct ctggtcgagg gagccctcgg
     2041 actctaccgg ggaatgggtg ccggcttgct cgcaatagac tttctcggct ccgcgcaact
     2101 tctacctact acgcaaatcg acaacctcac cgtcgaccag aacgcccggc gcattggcag
     2161 catcgctttg ggcctgggct atggcgcacg agtcggattg ttgcgggggt tgggacctct
     2221 gcccgatgtg tcggtcagtc tcatgcggcg ggacattccc cagattacct atggcgatgt
     2281 gaacaccgga gacgactaca gctacgggct ggacctccac gccaccaacc tgcgtctgat
     2341 cgcgagcaag cagatcgcgg tgctcgacgt agcggccggc ctcggctggg ataagtatac
     2401 cggcgacgcc gtggtccagt tccgcgaccc ggtcaccacc gcgatacagc cgaatgttcc
     2461 gctatcgttg agcagctcgc gcgtactcgg cttcgtcaac gccggcctca gcatgtcgat
     2521 ggtacggctg accggcgagg tcggctacca gggtggcaag gaccagaact tgtccaccag
     2581 tttcgaggat ttcgacacca ccaaggggaa gttattcgct ggtctcggcc tgcgggtgag
     2641 cttctagcgc cgcaatgaac gagcgggaag ccatggcccg cgccctcgac cttgcgtggc
     2701 gagggtgggg acgggtgcag cccaatccgc tggtcggcgc ggtcgttctg cagaatggtg
     2761 aaccggtagg agagggttgg caccctgagt tcggcgaccg tcacgccgaa gcagtggcgc
     2821 tggccagagc aggggaacgg gctcgagggg cgaccatggt cgttaccctc gagccctgtt
     2881 cgcatcaggg gaagcagccg ccttgcaccg aggcgatcat ccgctccggg atccggcggg
     2941 tcgtcgctgc gctgcccgat cccaatccag cagccgccgg tggcggggac cgcctgcggg
     3001 aagccggcgt agaggtggag ctcggcccgt tgagcgatgc ggccgcggct cagaacgcca
     3061 tcttcctcca ctcgctcgcc ccgacaacgc atccctatgt cgcgctcaag ctcgccacca
     3121 cgctggatgg acggatcgcc gatgggtacg gacggtcgcg ctggatctcg ggcgcagaga
     3181 gtcgcgacta cgtgcaatgg ctccgggccg ggttcgacgc catcgcggtg ggtggccgaa
     3241 ccgctcggct ggacgatccg tcactcaccg ttcggggtaa ggttcagcct cgggttcctc
     3301 cccgtcgggt tgtcttcgac agcgccgcag acctgggtcc ccaactcacc ctgatccgaa
     3361 ccgcgagcga ggtgcccaca ctcgccgttg tgtcgccgaa ggccgacgtc agcagggtca
     3421 agcggctgga ggccggcggc gtaaccgtcc tccgggcggg aacgctcgac gaatcactcc
     3481 agtccctata tggtctggga atcaggtcgc tgctgataga aggcggagga caacttgccg
     3541 gggcgctgat gggagccgga ctggtgaatc ggtactactg gtttcagtcg ccgctgtggc
     3601 tgggcgacgg cggggtgccg gcgcttgccg gacttccgtc caggcatttg gagcaggccc
     3661 agcggtggcg ggtcatcgaa cgccaggtgc tcggggagga tactctgctg gtactggacc
     3721 ggccctgaat gttcaccggg ctcatctctg caaccgggca ggtgcagcga gcccagcgaa
     3781 acgccgatgg tctcgagctt acgatctccg cgccttacac cgatcttacc gaaggagaga
     3841 gtgtagcagt cgacggcgcc tgcctcaccg tgcagagtct ttcagccggc ggcttcacct
     3901 ctcacatcat ccgcaccaca ttggatcgaa cgcggtttgc ggactacgct ccgggacgaa
     3961 gagtgaatct ggaacgggcg ctacgcgtcg gcgaccggtt gggcggccac ctggtccagg
     4021 gccacgtcga cggagtgggc acggtggcgc aggttcagga gcgagaggat gcccggctgt
     4081 tggacctcca ggtaccggcc gagatcgccc ggctctcggt gccgctcggc tccatcactg
     4141 tagatggcgt
//
LOCUS       DASRPQ010001210         1204 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3907484, whole genome shotgun sequence.
ACCESSION   DASRPQ010001210 DASRPQ010000000
VERSION     DASRPQ010001210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1204
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3907484"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..948)
                     /locus_tag="VFD73_13865"
     CDS             complement(<1..948)
                     /locus_tag="VFD73_13865"
                     /inference="COORDINATES: protein motif:HMM:NF017722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004062 - aryl sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
                     /protein_id="HZI75082.1"
                     /translation="MTNQASYRLHRRTVLTGVAVLGASAATACASRPLQSGQQTPAAA
                     VVEQNTTKRRGVGLRAFNPERASPGFTLFSPLIWGDGRVYLIDLHGTVVHTWNMPYPP
                     GLSGYLTERGTLFYNGRTSEESFLSRFPFKGGVVLEADWNGKVLWEVRHPDHHHHGIL
                     LRNGNVLLNCMGRVPDDIARRVKGGVEEDRFPSGQYAPRSKEEAGKMYSDYLAEVTPA
                     GQTVWEWRTWEHLDPVADGIAEVQAPRTLWAQGNSVLELPDGDILASYRPTSTVIRIS
                     RKTGKILWKLGSPTVAGQHAPTQLGNGNILIFDNGVHRLD"
     gene            complement(992..>1204)
                     /locus_tag="VFD73_13870"
     CDS             complement(992..>1204)
                     /locus_tag="VFD73_13870"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HZI75083.1"
                     /translation="EGAVWRDPERIEEWMGSLSKDEPVVTFCVYGFHIGCQSAAALRK
                     AGFDARYMAGGHYAWKAIKGPVKLFA"
BASE COUNT          205 a          381 c          388 g          230 t
ORIGIN      
        1 gtcgagacga tgtacgccgt tgtcgaagat caggatgttg ccgttgccca gctgggtggg
       61 ggcatgctgg cccgcgacgg tcggagatcc aagcttccag aggatcttgc cggtcttgcg
      121 tgagatgcgg atcacggttg acgtgggtcg gtagctggcg aggatgtcgc cgtcaggcag
      181 ctccaggaca ctgttgccct gggcccacaa ggtccggggc gcctggacct cggcgatgcc
      241 gtctgccacg ggatcgagat gctcccaggt ccgccactcc cagaccgtct gtccggccgg
      301 cgttacctcg gcgaggtagt cggagtacat cttgccggcc tcctccttcg accggggcgc
      361 gtactggccc gaagggaagc gatcctcctc cacccctcct ttgacacgcc gggcgatgtc
      421 gtcgggaacc cgacccatgc agttcaacag cacattgcca ttgcgcaaca ggatgccgtg
      481 gtgatggtgg tccggatggc gtacttccca gagcaccttg ccgttccagt ccgcttccag
      541 gaccacgcct cccttgaagg gaaagcggct gagaaagctc tcctctgacg tgcgtccgtt
      601 gtagaacagg gtgccgcgct cggtgagata gccggacagg cctggcgggt acggcatgtt
      661 ccaggtgtgg acgaccgtgc catgcagatc gatgagatac actctgccgt ctccccagat
      721 cagcggagag aagagggtaa accctggaga ggcgcgctcc gggttgaacg cgcgcaaccc
      781 aaccccccga cgcttggtgg tgttttgctc gaccacggcc gccgcaggtg tctgttggcc
      841 gctttggaga gggcgactgg cacatgctgt ggcggcgctc gcgcccagga cggcgacgcc
      901 ggtgagcacc gtgcggcggt gcaggcggta ggacgcctgg ttggtcattg gatgggcctc
      961 catgactggg acacttgtca ccgcgccagc ttcacgcaaa gagcttgacc gggcctttga
     1021 tggccttcca tgcgtagtgc ccaccagcca tgtatcgggc atcaaagcca gcctttcgca
     1081 gcgcggctgc gctctggcac ccaatgtgga agccgtatac acagaatgtg accaccggct
     1141 cgtccttcga aagacttccc atccattctt ctatgcgctc cgggtcacgc cagaccgccc
     1201 cttc
//
LOCUS       DASRPQ010001211         1390 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_770346, whole genome shotgun sequence.
ACCESSION   DASRPQ010001211 DASRPQ010000000
VERSION     DASRPQ010001211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1390
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_770346"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1381
                     /gene="hslU"
                     /locus_tag="VFD73_13875"
     CDS             <1..1381
                     /gene="hslU"
                     /locus_tag="VFD73_13875"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016448039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HZI75084.1"
                     /translation="GQEAAKKAVAIAVRNRWRRAQAPDEIRDEITPYNIIMIGPTGVG
                     KTEVARRLARLSGAPFIKVEASKFTEVGYVGRDAESMVRDLVDSAINLVRTEREDEVY
                     PQAEQRADERLLDLLLPAAPPPPQTERAERAERAESASVFVVSSSGQAKSEKPATAEE
                     ERRNRSREKLRTMLSEGMLDDREVEVEVQQQGYPMMELIQPPQGLEGVGADINFTEML
                     QDMLPKRKKRRTVKVPEARRILVDEELKKLVDMDDVVNESLDRVENHGIIFIDEIDKI
                     AGERGQAGGPDVSREGVQRDLLPIVEGSTVQTRYGYVRSDHILFIAAGAFHVSKPSDL
                     IPELQGRFPIRVELSPLTEQDFIRIMTEPENALTKQYQALVMSEGAELEFTTDGIAEV
                     ARVAFMANDRMENIGARRLHTVMAALMEDVLYELPDDSEKKIVFDANNVRERLARIIS
                     DDDLRRYIL"
BASE COUNT          286 a          417 c          476 g          211 t
ORIGIN      
        1 cgggcaggag gcggccaaga aggcggtggc catcgcggtg cgaaaccgct ggcgccgggc
       61 ccaggcaccg gacgagatcc gggacgagat cacgccctac aacatcatca tgatcggccc
      121 caccggggtc ggcaaaaccg aggtggcacg ccggctggct cggctcagtg gagcaccgtt
      181 catcaaggtg gaagcgtcca agttcactga ggtgggctac gtgggccggg acgccgaatc
      241 gatggtgcgc gacctggtgg acagcgccat caacctggtg cgcaccgagc gggaagacga
      301 ggtctatcct caggcggaac agcgggccga cgagcggctg ctggatctgc ttctgcccgc
      361 cgcacctcca ccgccccaga cggaacgtgc ggaacgtgcg gaacgggcgg agagcgcttc
      421 ggtgttcgtg gtctcctcca gtggacaggc caagtcggaa aagccggcga cagcggaaga
      481 ggagcggcgg aatcgctccc gcgagaagct gcgaacgatg ctgtcagaag gcatgctgga
      541 cgaccgggaa gtcgaagtcg aggtgcagca gcagggctat ccgatgatgg agctgattca
      601 gccgccccag ggactcgaag gtgtcggggc tgatatcaac ttcaccgaga tgctgcagga
      661 catgctgccc aagcggaaga aacggcgcac ggtgaaggtg ccggaggctc gccggatcct
      721 ggtggatgaa gagctgaaga agctggtcga catggatgac gtggtcaacg aatcgctgga
      781 ccgggtggag aaccacggca tcatcttcat cgatgagatc gacaagatcg cgggcgagcg
      841 gggccaggcc ggcggtcccg atgtctcccg cgaaggggtc cagcgcgatc tcctgcccat
      901 cgtcgagggg tccacggtcc agacccgtta cggctatgtc cggagcgatc acatcctgtt
      961 catcgccgcc ggcgcgttcc acgtctccaa gccctccgac ctgatcccgg agctgcaggg
     1021 tcgcttcccc atccgggtgg agctctcgcc gctcacggag caggacttca tccgcatcat
     1081 gaccgagccg gagaacgccc tcaccaagca gtatcaggcg ctggtcatgt ccgagggggc
     1141 tgagctggag ttcactacgg acggcatcgc tgaggtggcg cgcgtggcgt tcatggccaa
     1201 cgaccggatg gagaatatcg gcgcgcggcg gctccacaca gtcatggcgg cgctgatgga
     1261 agatgtgctg tacgagttgc ccgacgactc cgagaagaag atcgtcttcg acgccaacaa
     1321 cgttcgcgag cgcctggccc gcatcatcag cgacgacgat ctcagacgct atatcctcta
     1381 gaatcaagga
//
LOCUS       DASRPQ010001212         2393 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2961015, whole genome shotgun sequence.
ACCESSION   DASRPQ010001212 DASRPQ010000000
VERSION     DASRPQ010001212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2393
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2961015"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1198)
                     /locus_tag="VFD73_13880"
     CDS             complement(<1..1198)
                     /locus_tag="VFD73_13880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75085.1"
                     /translation="MRRVLLTIALALVAGPAQAQHLRDRLSDLFIFGSGESPLVLGGT
                     SDPSNPESIRIHGNHFVPAAVASNGTIISFLTNSIGSNVANVPVSATSGGTTFSFQGG
                     VPTRTSTSAGPIFGERAQTLGRGRVLASLSRTGVRFKTLRGVDLDHLRFTFTHANSDF
                     PGCDSIAGGDCSLLGVPTLENETIDLNLALDIDLTVTGFLLTYGVTDRVDIGVALPLV
                     SVSLNGTSNAQVNPFGPPPAVHFFGGTPDNPILTASRSVEGSTTGLGDVDGRVKINLR
                     RAEPLSVAVLADVRFPTGSESNLLGSGAFAARGLAILSARFGNFSPHANVGYLYRGGQ
                     FETDAVLATAGFDHLLAPWATLAIDVISQLQVGESPLQVPGPVEIQAPYHRTIIPTVI
                     PDTRDDI"
     gene            1357..1611
                     /locus_tag="VFD73_13885"
     CDS             1357..1611
                     /locus_tag="VFD73_13885"
                     /inference="COORDINATES: protein motif:HMM:NF021552.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2277 domain-containing protein"
                     /protein_id="HZI75086.1"
                     /translation="MCRNIKRLRHPDHPPSDAELHDAALQFIRKISGFRVPSQANQAA
                     FERAVQGVTDVSREMFRSLRIREPAGHHHHAEGPLASHAG"
     gene            1617..1952
                     /locus_tag="VFD73_13890"
     CDS             1617..1952
                     /locus_tag="VFD73_13890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75087.1"
                     /translation="MISRIWRGWTSRQNADAYESLLKAEIFTGIIERGITGFQGIDLL
                     RRELEEEVEFVTIMWFDSLLAVRTFAGEDYERAVVPVKARQLLKRFDERSAHYEVRER
                     RGPDNGHAA"
     gene            complement(1990..>2393)
                     /locus_tag="VFD73_13895"
     CDS             complement(1990..>2393)
                     /locus_tag="VFD73_13895"
                     /inference="COORDINATES: protein motif:HMM:TIGR04256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HZI75088.1"
                     /translation="HHRGTKDTKDLSISITYEIIGAAIAVHRSLGPGLLESAYHACLC
                     QELRYRGISYRDQVALPVRYRTVYVECGYRLDLVVENCVIVEIKAVRRVHPIHKAQLL
                     TYLKLTGVRLGLLINFNVEVLRSGISRVVNG"
BASE COUNT          503 a          687 c          766 g          437 t
ORIGIN      
        1 cgatgtcgtc gcgagtatca gggatgacag tggggatgat cgtccgatga tagggcgcct
       61 ggatttccac cgggcccggc acctgtagcg ggctctcgcc cacctgaagc tgggaaatga
      121 catcgattgc gagggtggcc cagggtgcca gcaggtggtc gaatcccgcg gtcgcgagca
      181 cggcgtcggt ctcgaattgg ccgccgcgat agagatagcc gacgttggcg tgagggctga
      241 agttcccgaa cctggcggag agaatggcga ggccgcgagc agcaaaagct ccggagccca
      301 gcagattgct ttcactgccg gtggggaagc ggacatcggc cagcaccgca accgacagcg
      361 gctcggcccg gcggaggttg atcttgaccc tgccatcgac gtctcccaat ccggtcgtgg
      421 acccctcgac cgagcgcgac gcggtgagaa tgggattgtc cggtgtgccc ccaaagaagt
      481 gcaccgccgg aggcggcccg aacggattca cctgggcgtt gctggtgccg ttcagtgaaa
      541 ccgacaccag gggcagcgcc acaccaatgt ctacccggtc ggtgacgcca taggtcagga
      601 ggaagccggt caccgtcaag tcaatatcga gcgccagatt caagtcgatg gtttcgtttt
      661 ccagcgtggg gacacccagc agcgagcagt cgccgccggc gatcgaatca catccgggga
      721 aatccgagtt cgcatgggta aaggtgaacc gcaggtgatc gagatccaca cctcgaaggg
      781 tcttgaagcg aaccccggtg cgggagagac tggccagcac cctgccccgg ccgagcgtct
      841 gcgcccgttc gccgaaaatc gggccagccg aggtggaggt tctggtggga accccaccct
      901 ggaaactgaa cgtggtgcca ccgctggtgg cgctcaccgg tacattcgcc acattactgc
      961 cgatcgagtt cgtcagaaat gagatgatcg tcccgttgct ggccaccgca gccggaacga
     1021 agtggttgcc gtggatccga atcgactcgg ggttggaggg atcgctggtc ccgccgagga
     1081 cgagggggct ctcgcccgag ccaaagatga aaaggtccga gagacgatcc cgtagatgct
     1141 gagcctgagc cgggccggcc acgagggcca gggcgatggt cagcaggacg cgccgcatga
     1201 aagctccgag gggagtggtg gcgaaccaaa ctggcaatgt gggctacatt ctctactata
     1261 tcagttttac acacaatcgg gtgagtcacc gcttcggcgc attgcccgaa agccaactca
     1321 ccccagaccg cgatcgaagc ttctgatgga ggaaccatgt gccgcaacat caagcgtctg
     1381 cgccatccgg atcacccgcc gagtgacgcc gagctgcacg acgccgccct gcagttcatt
     1441 cgcaagatca gcggtttccg ggtgccatcc caggcaaacc aggctgcctt cgagcgagcg
     1501 gttcagggag tgaccgacgt ctcccgcgag atgttccggt cgttgcggat ccgcgagcct
     1561 gcggggcatc accatcacgc cgagggcccc ctggcgtccc atgccggcta gatgagatga
     1621 tcagccggat ctggcgcggc tggaccagcc ggcagaatgc cgacgcctac gaatctctgt
     1681 tgaaggccga gatcttcacc gggattatcg agcgtggtat taccggtttt cagggaatcg
     1741 atctactccg gcgggagctg gaggaggagg tcgagttcgt gacgatcatg tggttcgact
     1801 cgctgttggc ggtccgaacc tttgccggag aggattacga gcgtgcggtg gttccggtca
     1861 aggcccgcca gctgctgaag cgcttcgacg agcgttccgc gcattacgaa gtccgtgagc
     1921 gacgcggccc tgacaacggc cacgcggcgt agaaaactca ccacagaggc acaaaggacc
     1981 tggaagatgt tatccgttta cgactcggga aatgccagat cgaagcactt caacattgaa
     2041 attgatcagt aatccgagac gtacgccggt caatttgagg taggtaagga gttgcgcctt
     2101 atggatcggg tgcactctgc ggactgcctt gatctcgacg atgacacaat tttccaccac
     2161 taagtcgagt ctgtatccgc actccacata aaccgtgcgg tatcggactg ggagtgctac
     2221 ttgatctctg tatgatatgc cacgataacg cagctcctga cacagacagg catgataggc
     2281 tgattccagt aagcctggtc ctaacgaacg gtgcacggcg atggcggcgc cgatgatttc
     2341 gtaagtaatg gagatcgaca gatcctttgt gtcctttgtg cctctgtggt gaa
//
LOCUS       DASRPQ010001213         3598 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1402709, whole genome shotgun sequence.
ACCESSION   DASRPQ010001213 DASRPQ010000000
VERSION     DASRPQ010001213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3598
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1402709"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1105
                     /locus_tag="VFD73_13900"
     CDS             <1..1105
                     /locus_tag="VFD73_13900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI75089.1"
                     /translation="DDENVIALKSLADINERLERYGEAQRWLNRLLSVDRSNEDARQQ
                     LARVETAKQKSERKPTTPEPSAAEPEVTEPPKGVQSPAAAGATKSDLSKADQPSEPPP
                     AQPAEPVLDLTAALDEPSTMVPAKEATPAASASEAGSSTLEFLDTSAPAEPATPAPAE
                     PTEAVPGLISAEFVPPKDSTYRLHPELTQDLVARDDPIVENLEVETAEDVELQSSGAS
                     EFRVPNAAEDFLDAEPAPAAAELEAFPPPRPAPPPEPVPAQPVPSIPDPVESVLRRPE
                     KRSYSARDTKGQSVAAFFASLLAARPAQGANGGPTPATGPAPVPSSSSDDVSFDEFFG
                     AASAGSTPTTQGTTDPGKDDLDQFQSWLQNLKR"
     gene            1106..1543
                     /gene="aroQ"
                     /locus_tag="VFD73_13905"
     CDS             1106..1543
                     /gene="aroQ"
                     /locus_tag="VFD73_13905"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HZI75090.1"
                     /translation="MRVAVLNGPNLNLLGKREPEIYGRSSLEDIEAMVRHSAKTLEVD
                     VDWFQTNHEGEMVDAVQRLSGQVQGALINAAALTHSSLALRDALLAVRVPFVELHLSN
                     IFAREVERRHSVIADLAIGMITGFGPQSYLLGLQALVGRLRGN"
     gene            1533..2621
                     /locus_tag="VFD73_13910"
     CDS             1533..2621
                     /locus_tag="VFD73_13910"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HZI75091.1"
                     /translation="MATDRRLARQTALRELLKAASLDGLLVAHLPNIRYLSGFTGSAA
                     LLLVQTDGATLITDFRYASQAPMEVGDAARVEIDQRSVWDRLGRLLAGPADTTLGIEA
                     HALPVRDAERLSRLTSCRIVPTTELVERLRAAKDPAEVAAIRAAAELAQEALAEVLPQ
                     VRPGQTELEIASVLEAALRRRGSEWHPFPTIVASGPRSALPHARTSRRVLLRGELLLV
                     DFGAQVDGYCADLTRTAVVGARADDRQRAMHDLVQTAQRRSLQQLRAGMSSCEGDALA
                     REVIVQAGFGDAFGHSLGHGLGLEVHEAPRLAPNSDAPLPLHAVVTVEPGVYFPGWGG
                     IRLEDDVYLGPSGTERLSDGRTELLELV"
     gene            2623..3183
                     /gene="efp"
                     /locus_tag="VFD73_13915"
     CDS             2623..3183
                     /gene="efp"
                     /locus_tag="VFD73_13915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006858652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HZI75092.1"
                     /translation="MASTADFKNGLVLDIDGQLFQLVYFQHVKPGKGGAFVRTKLKNI
                     RTGAVIDRTYTAGERVNDVRLERRPIQFSYADGHFYHFMDQQTFDDIMLTDELIGPDQ
                     LKYLKEGMECEGLVHNDRVISVELPSFVELTVTSTAPGIRGDTATGGTKPATLETGAT
                     VQVPLFIEEGQVIRVDRREDKYLTRV"
     gene            3204..>3598
                     /locus_tag="VFD73_13920"
     CDS             3204..>3598
                     /locus_tag="VFD73_13920"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HZI75093.1"
                     /translation="MAELLQNVPGIHSIDLKDVKRLAQLLRETPEIGSIEVKGWFGTG
                     VVITRTTAAPVALPAALPVQSATPSSPAVAKEAEREAQSRPSAPAPQLKEIRSPMVGT
                     FYKAPEPGADAYVRVGSRVNPGQTVCIIEA"
BASE COUNT          682 a         1134 c         1145 g          637 t
ORIGIN      
        1 cgacgatgaa aacgtcattg cgctcaaatc cctggccgat atcaacgaac gactggaacg
       61 ctacggggaa gcgcagcggt ggctgaatcg tctactgtcg gtagaccgga gcaacgaaga
      121 cgcccgtcag caactggcca gggtcgaaac agccaagcag aagagcgagc gcaaaccaac
      181 gactccggag ccgagcgcgg cggagccgga ggtaaccgag cccccgaaag gggtgcaaag
      241 ccctgccgcg gctggcgcga cgaaaagcga tctctccaag gccgatcaac cttccgagcc
      301 tccgcctgct cagcctgcag aaccggtctt ggatctcacc gcggcgttgg atgaaccctc
      361 cacgatggtc ccggcaaagg aggcgactcc agcggcaagc gccagcgaag ccggctcaag
      421 cacgctggag tttctggata cctcggcgcc ggctgagccg gctactccgg cgccagccga
      481 gcctaccgag gctgttcctg gactgatcag cgctgagttc gtgccgccga aggacagcac
      541 ctatcgactg cacccggagc tgactcagga cctcgttgca cgcgatgacc ccattgtcga
      601 aaacctcgag gtagaaacgg cagaagacgt cgagctccaa agttcgggag cctctgaatt
      661 ccgggtgcct aatgcggctg aggattttct cgacgccgaa ccagcccccg ctgctgccga
      721 gcttgaagcg tttccgcctc cgcggccggc tccgccgcca gaaccggtgc ccgctcaacc
      781 ggtgccgtca attccggacc cggtcgaatc agtgctgcgg agacccgaga agcgatcgta
      841 ttctgcgcgg gacaccaagg gacagtcggt cgccgcattt tttgccagtc ttctggccgc
      901 ccgaccggcg caaggcgcaa atggcggtcc caccccggcc accggccccg ctcccgttcc
      961 atcttcttcc tcggacgacg tttccttcga cgagttcttt ggcgccgcgt ccgctggctc
     1021 gacacccacc acccagggca ccacagatcc tggcaaggac gatctcgacc agttccagtc
     1081 ctggctgcag aacctcaagc gctgaatgcg tgtcgcggtg ctcaacggtc ccaacctgaa
     1141 cctcttgggc aagcgggagc cagagatcta cggccgaagc agcctcgaag acatcgaagc
     1201 catggtgcga cactcggcga agaccctcga ggtcgacgtc gactggtttc agacgaatca
     1261 cgaaggtgag atggtcgatg cggtacagcg gctctcggga caggttcagg gtgctctgat
     1321 caacgccgcg gcactgactc attcgagcct cgccttgcgc gatgcgctgt tggcggtccg
     1381 ggtgccgttc gtcgaattac acctgtccaa catctttgct cgcgaggtgg agcgaaggca
     1441 ttcggtgatc gcagatctgg caatcgggat gatcactggg ttcggccctc agagttatct
     1501 cctgggattg caggcgctgg tgggccgtct tcgtggcaac tgaccgcaga ctcgcgcgcc
     1561 agacggctct gcgcgagctg ctcaaagcag cgtcgctgga tggcttgttg gtcgcacatc
     1621 tgcccaacat ccgctacctc agcggcttta ctggttcagc ggctctcctc ctggttcaaa
     1681 ccgatggcgc aacgctgatc accgatttcc gctatgcctc gcaggcaccg atggaagtcg
     1741 gagatgcggc gcgagtggag atcgatcagc gtagcgtctg ggaccggctg ggccgtctac
     1801 tggcgggccc cgccgatacg actctgggta ttgaagcgca cgcacttccg gtgcgtgatg
     1861 cagagcgact cagccgtctg acctcgtgcc ggatcgtgcc cacgacggag ctggtggagc
     1921 ggttgagagc agccaaagat ccggcggagg ttgccgccat ccgcgctgca gccgagctgg
     1981 cccaggaggc gcttgcggaa gttttgccgc aggtgcgtcc cggtcagacc gaactcgaga
     2041 tcgcctcggt gctcgaggcg gcgctgcggc gacgagggag tgagtggcat ccattcccca
     2101 cgatcgtggc ctccgggccg cggtcggcgc tgccccatgc ccgaaccagt cgacgggtcc
     2161 tcctccgggg agagctcctc ctggtcgact tcggggcgca ggtcgatgga tattgtgccg
     2221 atctcacccg aacagcggtc gtgggtgcgc gggcggatga tcgccagcgg gccatgcacg
     2281 acctggtcca gacagcgcag cgtcggtcgc tgcagcagct tagagccgga atgtcctcct
     2341 gcgagggaga cgccttggct cgagaagtga tcgtgcaggc cggtttcggc gacgccttcg
     2401 ggcactctct gggtcacggg ttgggcctgg aggtgcacga agctccgcga ttggccccga
     2461 actcggatgc gccgttgccg cttcatgccg tggtcacggt tgaaccgggt gtctattttc
     2521 cgggctgggg aggaatccgg ctggaggacg acgtctatct cggaccatcc gggaccgagc
     2581 gtctgtccga tgggcgcacc gaattgctcg aactggtcta gcatggcctc gactgctgat
     2641 ttcaaaaatg ggctggtgct cgatatcgat ggccagttgt ttcaactggt ctactttcag
     2701 cacgtaaagc ccggaaaggg cggcgccttc gttcgcacca agctcaagaa tattcggacc
     2761 ggagcggtga tcgaccgcac gtatacggcc ggcgaacggg tcaacgatgt gaggctggag
     2821 cgccgtccca tccagttctc gtatgccgat ggtcacttct accatttcat ggaccagcag
     2881 accttcgacg acatcatgtt gacggatgag ctgatcggac cggatcagct caagtacctg
     2941 aaagagggca tggagtgcga gggattggtg cacaacgacc gggtgatcag cgtcgagctg
     3001 ccctccttcg tcgagctgac cgtcaccagt accgccccgg gcatccgggg ggacaccgcc
     3061 accggtggga ccaagccggc aacgctcgag acgggagcga cggtgcaggt tccactcttc
     3121 atcgaggagg gccaggtgat tcgggtcgac cgccgtgaag acaagtatct gacccgcgta
     3181 tgagtcccca ggagatgcag gagttggctg aacttctgca aaacgtgcca ggcattcact
     3241 ccatcgacct gaaggacgtc aaacgtttgg cgcagctgct gcgcgaaacg cccgagatcg
     3301 gatcgatcga ggtgaaaggc tggttcggca ctggggtagt gatcacccgg actacagcgg
     3361 cgcccgtcgc ccttccggca gccttgccgg tgcagtcggc cacaccctcg tctcctgcag
     3421 tcgccaagga agcagagcga gaagcgcagt cccgcccctc ggctccggcg ccccagctca
     3481 aggaaatccg ctcaccgatg gtggggacct tttacaaggc tcccgagcct ggtgccgacg
     3541 cctacgtacg ggtcggcagc cgagtcaacc cgggacaaac cgtctgcatc atcgaggc
//
LOCUS       DASRPQ010001214         1269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3907988, whole genome shotgun sequence.
ACCESSION   DASRPQ010001214 DASRPQ010000000
VERSION     DASRPQ010001214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3907988"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1114)
                     /gene="proS"
                     /locus_tag="VFD73_13925"
     CDS             complement(<1..1114)
                     /gene="proS"
                     /locus_tag="VFD73_13925"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HZI75094.1"
                     /translation="MAENKALTTRATDFSAWYNEIIARAELADYSPVRGCMVIRPNGY
                     AIWEQMQRALDQMFKDTGHQNAYFPLFIPQSFLSREAEHVEGFAPETAVVTHGGGKEL
                     EEPLVVRPTSETIIYAMYAKWIQSYRDLPVLINQWANVVRWEMRTRLFLRTTEFLWQE
                     GHTAHATEAEAEEEARRMLGVYRTFMEDWMAMPVLTGLKTESERFAGALRTYSTEALM
                     QDNKALQAGTSHNLGQNFSRAFEVTFQTANGDLEHVWNTSWGVSTRLVGALIMTHSDD
                     VGLVCPPKLAQYQVVIVPIYKSDEERTIVLEASDRLRKELAAGGVRVHLDAREGMKPG
                     AKYYEWEGRGVPLRIELGPRDLAAGSVVLARRTGGKK"
BASE COUNT          203 a          442 c          373 g          251 t
ORIGIN      
        1 ccttcttgcc gccggtgcgc cgggccagca cgacggagcc ggcggccagg tcgcgcggac
       61 cgagctcgat ccgcaggggc actccccggc cctcccattc gtagtacttg gcgccgggct
      121 tcatcccctc ccgggcatcg agatggaccc gcaccccacc cgcggccagc tccttccgca
      181 gccgatccga tgcctcgagc acaatggtgc gctcttcgtc gctcttgtag atcgggacga
      241 tgaccacctg gtactgggcc agcttgggcg ggcagaccaa tcctacatcg tcgctatggg
      301 tcatgatgag cgcaccgacc agccgggtgg agactcccca cgaggtattc cagacgtgct
      361 ccagatcgcc attcgccgtc tggaaggtga cctcgaatgc ccgggaaaag ttctgcccca
      421 gattgtggct ggtccccgct tgcaaggcct tattgtcctg catcagggcc tcggtgctgt
      481 aggtccgaag cgcgccggca aaccgctcgc tctcggtctt gaggccggtg agcaccggca
      541 ttgccatcca gtcttccatg aaggtgcgat acacccccag catccgccga gcttcttcct
      601 ctgcttctgc ctcggtcgcg tgtgcggtat gtccctcctg ccagaggaac tcggtggtgc
      661 gcagaaacag gcgggttcgc atctcccagc ggaccacgtt ggcccactgg ttgatcaaca
      721 ccggcaggtc gcgatagctc tggatccact tggcgtacat cgcgtagatg atggtctccg
      781 aggtcggccg gacgacgagc ggctcttcca gctccttgcc tccgccatgg gtgaccaccg
      841 ctgtctccgg ggcgaatcct tccacgtgct ccgcttcacg cgacaggaaa ctctgcggga
      901 tgaagagcgg gaagtaggcg ttctgatgcc cggtgtcctt gaacatctgg tccagcgcac
      961 gctgcatctg ctcccagatg gcatagccgt tgggccggat gaccatgcag ccgcgcaccg
     1021 ggctgtaatc ggccagctcg gcccgcgcga tgatctcgtt gtaccatgcg ctgaagtcgg
     1081 ttgcccgcgt cgtgagcgcc ttgttctcag ccatggagcc gattcctgat tgcgtcgatc
     1141 accgttgact ctcgcaccct ctcctggttt ccggactgaa gatcccgcag caccacctca
     1201 ccccgagcgc gttcatccgg cccaaggacc accgcgactc tggcatgccg cgcatccgcc
     1261 agcttcatc
//
LOCUS       DASRPQ010001215         2028 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1402797, whole genome shotgun sequence.
ACCESSION   DASRPQ010001215 DASRPQ010000000
VERSION     DASRPQ010001215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1402797"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1537)
                     /locus_tag="VFD73_13930"
     CDS             complement(<1..1537)
                     /locus_tag="VFD73_13930"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HZI75095.1"
                     /translation="MPSLRVVVALVVLSLACSPKQPVSETPAPTPKPNIDPGHIPAEK
                     MKVPPPAKEPQLAEDTLRPMVPAEAAFAHGWMPLASTGVEQFLRQHPDNDGRGVIIGI
                     LDTGVDPGIPGLQKTSTDSPKVLDLRDFSGEGAVRLERVTPKGDTVEVGGRKLGGFGR
                     VTAISTGGPYYGGTIAELPLGPPPASDLNANGSDSDTLPVLVTRATDGWVLLADTDGD
                     GSLAGERPVHDYLVARETFGWAPKGRAARLNIGVNFSEQHGQPDLDLVFDISSHGSHV
                     GGIAAGHDLYGVTGFNGVAPGAQLLALKIANSAQGSITTSGSMLRAIDYAIKFAQTRR
                     QPLVLNMSFGVGNEIEGTARIDQAVDSILEAHPDLVFTISAGNDGPGLSTMGFPGSTW
                     RSIGVGATLPASFLPPDPTSGHREDELAYFSSRGGEVAKPDLVTPGVAYSTVPRWSTG
                     QEIEQGTSMASPYAAGLAALLVSGLAQQKQEIRAADIKQALMVTAHPLRGESFVDQGT
                     GLPD"
     gene            complement(1545..>2028)
                     /locus_tag="VFD73_13935"
     CDS             complement(1545..>2028)
                     /locus_tag="VFD73_13935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HZI75096.1"
                     /translation="GPEAEQSGIIRAGAHFVEAMATALVPKIVLTINHASGAGYYAMA
                     GQGFDPDFILSWPTGRMGVMEGESAVMAVHGAEIEKARQEKREPSEEAKASMSSMRAD
                     YEHQLDAKFAGARGFVDAIITPEETRDQLAFALRITANYAGPHLGPFVLPPLDAAPGS
                     "
BASE COUNT          324 a          673 c          665 g          366 t
ORIGIN      
        1 tgtccgggag gccggtgccc tggtcgacga agctctcgcc ccgcagcgga tgcgcggtga
       61 ccatcaaggc ctgcttgata tcagcagccc ggatttcctg cttctgctgg gccaagccgg
      121 agaccagcag tgccgcgagc ccagcagcat agggagatgc catgctggtt ccctgctcga
      181 tctcctgtcc ggtgctccag cgaggaaccg tggagtacgc cactcctggc gtgaccaggt
      241 cgggcttggc cacttctcca ccgcgggagc tgaagtaggc gagctcgtcc tcccggtgtc
      301 cgctcgtcgg atcgggcggc aggaagctcg ccggcagcgt ggcgccgacc ccgatgctgc
      361 gccaggtgga cccggggaat cccatggtcg aaagccctgg gccgtcgttc cccgcgctga
      421 tggtgaagac gagatccgga tgcgcctcga ggatcgagtc gaccgcctgg tcaatgcgcg
      481 ccgtcccttc gatctcattg cccactccga aactcatgtt cagcaccagc ggctggcggc
      541 gagtctgagc gaacttgatg gcatagtcga tcgcgcggag catgctgccg ctggtggtaa
      601 tgctgccctg cgcgctgttc gcgatcttga gagcaagcag ctgcgcgccc ggtgccacac
      661 cgttgaagcc ggtcacaccg tagagatcgt ggccggcggc aatgcctccc acgtgagagc
      721 cgtggctgct gatgtcgaac accagatcga gatcgggctg tccgtgttgt tccgaaaagt
      781 tcaccccgat gttgagccgt gccgcccgcc cctttggtgc ccacccgaac gtctccctgg
      841 cgaccaggta gtcgtgcaca gggcgctcgc ccgccagtga accatcgccg tcggtatccg
      901 ccagcagtac ccaaccatcg gtggcgcggg tgaccagaac cggcagagtg tcgctgtcgc
      961 tgccgttggc gttcaggtcc gatgcgggag gcggacccag cggcagctcc gcgatggttc
     1021 caccatagta cggaccgccg gtgctgatcg cggtcacccg gccgaagccg ccgagcttac
     1081 gaccgccgac ttctacggtg tcgcccttcg gtgtcacccg ctccagccgg acagcgccct
     1141 cgccggagaa atcgcgcagg tccagcacct tcggcgagtc ggttgaggtc ttctgcagtc
     1201 cggggatgcc cgggtccacc ccggtatcca aaatgccgat gatcacacct ctgccgtcat
     1261 tatccgggtg ctgccgcaga aattgttcga ccccggtgct ggcgagcggc atccatccgt
     1321 gcgcgaacgc ggcctcggcg ggaaccatcg gtcggagcgt gtcctctgcc agctggggtt
     1381 ctttggccgg cggcgggact ttcatctttt cggcgggaat gtggcccggg tcgatgttcg
     1441 gcttcggggt cggcgccggt gtctcggaaa ccggctgctt gggagagcag gcaagactca
     1501 gaaccaccag agcaacgaca acgcgcaacg aaggcatgca gctcctagct tcctggtgcc
     1561 gcgtccagcg gcggaaggac gaacgggccg agatgcggcc ccgcatagtt cgcggtgatc
     1621 cggagagcaa acgcgagctg gtcgcgggtc tcttccggag tgatgatggc gtcgacgaag
     1681 ccgcgggcgc ccgcgaactt ggcatcgagc tggtgctcgt agtctgcccg catcgaactc
     1741 atcgatgcct ttgcctcctc cgatggctcg cgcttctcct gccgcgcctt ttcgatctcg
     1801 gctccgtgga ccgccatcac tgccgattcc ccctccatca ctcccatgcg tccggtgggc
     1861 caggagagga tgaagtcggg gtcgaagccc tgccccgcca tggcgtagta acccgcgccg
     1921 gacgcgtgat tgatcgtgag cacgatcttg ggcaccaggg cagtggccat ggcttcgacg
     1981 aagtgggcgc cggcgcgaat gatgccggac tgctccgcct caggaccc
//
LOCUS       DASRPQ010001216         1193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1080482, whole genome shotgun sequence.
ACCESSION   DASRPQ010001216 DASRPQ010000000
VERSION     DASRPQ010001216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1080482"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            110..>1193
                     /locus_tag="VFD73_13940"
     CDS             110..>1193
                     /locus_tag="VFD73_13940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75097.1"
                     /translation="MSENSKNDAVSPFVVGVSGHRDLRAEDLPHLRAAVTAILRRLAE
                     HLPDSELRIVAGMATGADLLVAQTALELGYAVDALLPMPLEHYAADFDPDSFDLLKRL
                     LAHPHVRSRELPLSTAGEGAGSDIPDRDVHYALLTQHLVRGCSLLIALWDGEPSPLPG
                     GTADTVLRYLGVRTDRNKDEVRIEFSEAGPNPDLPARLVYWIPTARAKTGADPGTAAA
                     VNGRAACFLAGLGDNALQRVPGMPHRLQVHLHSLNVYNREYQRFTSRWRSPVAPDSLL
                     RSLSGALRVNPHDAPVLERIDTQYGKADALAIHFQRRSDRLFSFFNLVAFAMGLAYLM
                     YEKFMTTRLLLFVYLLILTSSATVYYL"
BASE COUNT          193 a          410 c          360 g          230 t
ORIGIN      
        1 gggcgagcgt ttcaaggcct tgcgaaatgg cccgttgtcc aacgccgcct gcaggcggca
       61 caatgcccgc ccccccgagt accccctacc ttacccggcg attcaagctt tgtcggaaaa
      121 cagcaagaac gacgccgtct cacctttcgt cgttggggtt tccgggcacc gggatctgcg
      181 ggccgaggac ttaccgcatc tgcgggccgc cgtcactgcc atcctccggc gtctcgcgga
      241 gcatctcccg gattccgagc tcaggatcgt ggccggcatg gccaccgggg cagatctgct
      301 cgtggcacag actgccctcg agctcgggta cgccgtggat gcgctgctac ccatgccgct
      361 cgagcactat gccgcggact tcgatcccga ctcctttgat ttgctcaaga gactcctggc
      421 ccaccctcat gtgcgtagcc gtgagttgcc gctgagcacc gcgggggaag gcgcgggcag
      481 cgatatcccc gaccgggacg tccactacgc cctgctcact cagcatctgg tgcgcggatg
      541 cagtctgctc atcgcattgt gggacggaga gccatctccc ctgccagggg gcactgccga
      601 caccgttctg cgctatctcg gtgtgcggac ggatcgcaac aaggacgaag tgcggatcga
      661 gttctcggaa gcggggccca atccggacct cccggctcgg ctggtgtact ggattcctac
      721 tgcgcgtgcg aaaacaggcg cggacccggg aacggccgct gcggtaaatg gcagagccgc
      781 gtgctttctc gctggtcttg gcgacaatgc gctgcagcgc gtcccgggaa tgccccaccg
      841 gctgcaggtc cacctgcact cgctcaatgt ctacaaccgc gaataccagc gattcacgag
      901 ccgctggcgc tctcccgtcg cgcccgactc gctgttgagg agcctctccg gagcgctgcg
      961 cgtgaacccg cacgatgcgc cggtgctcga gcgcatcgat acccagtacg gcaaggccga
     1021 tgcgctggcc atccacttcc agaggcgctc ggaccggctg ttttccttct tcaatctggt
     1081 ggcctttgcg atgggcctgg cctatctcat gtacgagaag ttcatgacca cgcggctgct
     1141 gctgttcgtg tacctcctga tcctgacctc cagcgccacc gtgtattacc tgc
//
LOCUS       DASRPQ010001217         1455 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2674034, whole genome shotgun sequence.
ACCESSION   DASRPQ010001217 DASRPQ010000000
VERSION     DASRPQ010001217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1455
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2674034"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            54..827
                     /locus_tag="VFD73_13945"
     CDS             54..827
                     /locus_tag="VFD73_13945"
                     /inference="COORDINATES: protein motif:HMM:NF018095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0070064 - proline-rich region binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HZI75098.1"
                     /translation="MTGSTLESGCRSRPSTAVGHLACLLVLAATSTLSGCAGKPAEPA
                     PAPITVNRQARATAAARAEQDKKVSRLELALLEKGAQVEELQARLDQAREEVVRAMAK
                     LQTLASRAEAASGIAEAEVALQPLRNAPNQQAAPEAAQAGRLLREASAEFNQENYGGA
                     LYLANQAKALAAAGTGRLSSREHSADRPGEMSFAVPIPLKTVGSGNVREAPGTTAPVA
                     FAVEGGDSLTGYSYVEDWVRVSDDMGRGGWIYRKLISRR"
     gene            complement(902..>1455)
                     /locus_tag="VFD73_13950"
     CDS             complement(902..>1455)
                     /locus_tag="VFD73_13950"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HZI75099.1"
                     /translation="MNERLRKQNEELEKLSTSDALTGLHNRRFLTQRLSEELIRSYRH
                     KGSFAVLMADVDEFKKYNDAFGHPAGDEVLKRVASILLSSTRSVDCTARYGGEEFAVL
                     LTDTSSAVAAEVAERIRARVAAQDFPGRKITLSIGIGEFPEHGQTGEEVISAADEALY
                     AAKRAGRNRVVRSGEPGKVKGKA"
BASE COUNT          259 a          495 c          451 g          250 t
ORIGIN      
        1 ggacacccta attgccggac gaaccgctaa atcgcgccat ttggagctct tccatgaccg
       61 gaagcacgct ggaatcgggc tgtcgctcgc gtccgtccac tgcagtcggg catcttgcct
      121 gcctcctggt actcgcggca accagcactc tttccggctg tgccggaaaa ccggcagagc
      181 cggcgccggc gccaatcaca gtcaaccgcc aagcccgggc caccgccgcc gcccgcgcgg
      241 agcaggacaa aaaggtgtcg cgcctcgagc tggccttgct ggagaagggc gcccaagtcg
      301 aggagctgca agcgcggttg gaccaggccc gcgaggaagt cgtccgcgcg atggccaagc
      361 ttcagacgct cgcgagcaga gcagaggcgg cgtcaggcat cgcggaggca gaggtcgcgc
      421 tccagccgtt gcggaacgcg ccgaaccagc aggccgcgcc cgaagcggct caggccggca
      481 gactgctccg ggaagcctcg gcggagttca accaggagaa ctacggcggc gccctctacc
      541 tggcgaacca ggcaaaggcg ctggccgcag ccggcaccgg tcggctttcc tcccgcgaac
      601 actcggcaga tcgccctgga gagatgtcgt tcgccgtccc gattccgctc aagacagttg
      661 gctcggggaa cgtccgcgag gcacccggca ccaccgctcc ggtcgccttc gcggttgaag
      721 gcggcgatag tttgacgggc tactcgtacg tggaggactg ggtccgggtc agcgatgata
      781 tggggcgggg cggctggatc tatcgcaaac tgatctcccg tagataattc agagctcgct
      841 cttcttcgaa gtctcagggc cggcacctgg tttcagggcc ggcccttttc acgtccagct
      901 gtcaggcttt ccccttcacc ttgcccggct cccccgatcg aaccacccga tttcggcccg
      961 cccgcttggc cgcatacaac gcctcgtcgg cagccgagat gacctcctcg ccagtctgac
     1021 catgctcggg gaattctccg ataccgatgc tcagggtgat cttccggccc gggaaatcct
     1081 gggcggccac ccgcgccctg atgcgctcag ccacctcagc cgcgaccgca ctggacgtat
     1141 cggtcagcag cacggcgaac tcctcaccgc cgtagcgtgc ggtacagtcc accgagcggg
     1201 tagaactgag gagaatactc gcgactcgct tgagcacttc atcgccggca ggatgcccga
     1261 aggcatcgtt gtacttcttg aattcgtcga cgtcggccat gagcaccgcg aacgacccct
     1321 tgtgccggta cgaccggatc agctcttccg acagtctctg ggtaaggaaa cgacggttgt
     1381 gcaacccggt gagcgcatcc gaggtcgaga gcttctccag ttcctcgttc tgcttccgga
     1441 gtctctcgtt catgg
//
LOCUS       DASRPQ010001218         1886 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4541321, whole genome shotgun sequence.
ACCESSION   DASRPQ010001218 DASRPQ010000000
VERSION     DASRPQ010001218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1886
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4541321"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..735
                     /locus_tag="VFD73_13955"
     CDS             <1..735
                     /locus_tag="VFD73_13955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75100.1"
                     /translation="AAKKWDKQTEESRWIWSEYQRKWPPSERTPVDRATDSSASWVGD
                     RNRSLDSADNGRVEAACDRIADRERERITPAMRALESQDPDRHLIGFDDRLKGRDRIK
                     EKVYDTMEEVDSSVEEAVSIVPDAIRYTLQYRDARYTQGVWADITRMKDQGFELLKIK
                     NSWSGDQYKGVNSQWLEVDSGQRFEVQFHTRISYEAKQLTHDAYDRIRSHQADKFEQI
                     VLEAFQKKVADDVPTPPGAADIPDYP"
     gene            745..1020
                     /locus_tag="VFD73_13960"
     CDS             745..1020
                     /locus_tag="VFD73_13960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75101.1"
                     /translation="MPDKVTYYAIVNDLSSREQPAGVFRRIYTEDGGRSDEAFTRKLT
                     WEYSTSLISAERGDLQNEFVEITEDEANQIVARIRARVTGQSTAKDA"
     gene            complement(1244..>1886)
                     /locus_tag="VFD73_13965"
     CDS             complement(1244..>1886)
                     /locus_tag="VFD73_13965"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HZI75102.1"
                     /translation="RGAHGAPRTGEEPEMTKVVVAMSMSLDGIAGPESADADGMALFT
                     AILGWQFPLRSWRREQGMDGGEDSVDSRVWADNFGRFGPQVIGRTMFDFGYPNWGENP
                     PFHAPVFVVTHRGQERISKAGGTSYTFVTSGIAAAVEQARAVADGKDVLLAGGVSIAQ
                     QALAAGLVDEVVLHVVPKLVGRGVRLFGGSEVALRCVESIEGEGAVHLRYEVQ"
BASE COUNT          390 a          618 c          564 g          314 t
ORIGIN      
        1 gcagccaaga agtgggacaa gcagacagaa gagtcccgct ggatctggtc ggagtaccag
       61 cgcaagtggc ctcccagcga gcgcactcca gtcgatcggg ccaccgattc gtcggcctcc
      121 tgggtcggag accgcaacag atccctggac agcgccgaca acggccgagt tgaagcggcc
      181 tgcgaccgaa tcgctgaccg ggagcgggag aggatcacgc cggcgatgcg tgccctggag
      241 agccaagatc cagatcgcca cctcatcggc ttcgatgacc gcctaaaagg ccgcgaccgt
      301 atcaaagaga aggtctatga caccatggag gaggttgatt cctcggttga ggaggccgtc
      361 tcaattgtgc ctgacgcaat ccgatacacc cttcagtacc gggatgctcg ctacactcaa
      421 ggggtttggg ctgacatcac gcgtatgaag gaccagggat ttgaactact taagatcaag
      481 aattcctggt ctggagacca gtataagggc gttaatagcc aatggcttga ggtagacagt
      541 ggccagcgct tcgaggtgca gtttcatacc cgtatcagct acgaggcgaa gcaacttacg
      601 cacgacgcct atgatcgaat ccgctctcac caggcagata agttcgagca gatagtgctg
      661 gaggctttcc agaagaaggt tgctgacgac gttccgactc cgcctggtgc cgctgacatc
      721 cccgactacc cgtgagaggt gcagatgcca gataaggtca cctactacgc catcgttaac
      781 gacctgagca gccgcgagca accagcggga gtgttccggc gcatctacac ggaagacggc
      841 ggtaggtccg atgaggcgtt cacccggaaa cttacctggg aatacagcac gtcactgatc
      901 tccgctgaac gtggcgacct gcaaaacgag tttgtcgaga tcaccgagga tgaggcgaac
      961 cagatcgttg cgcggatccg ggccagggtc accggacaat caacagctaa agacgcatag
     1021 ggaaatagcc cgcgaggttc cagagggacc cagtatcagg tgccacagct ttcacgaccc
     1081 ccgtgattgc gtgtcgttgt acccctcatg aggggtacaa cgacacgcaa tgatccgcct
     1141 ggccgggcgg ggcctggttc ggcggggctg gtgtgactgc tgaggtgacc cgccaggtgg
     1201 cagcggagcg attccccgat caccaacccc aggacgtcgg cgatcactgc acctcgtagc
     1261 gcaggtggac tgctccctcg ccctcgatac tctcgacgca ccgcagagcc acctcgctac
     1321 cgccgaacag ccgaactccc cgccccacca gcttcggcac cacgtgcagc acgacctcgt
     1381 ccaccagtcc cgcagccagc gcctgctggg cgatgctgac cccgccggcc agcaggacgt
     1441 ccttgccatc cgcgaccgcc cgcgcctgct ccaccgcggc ggcaataccg ctggtcacga
     1501 acgtgtagct cgtcccgccg gccttggaga tccgctcctg cccgcggtgg gtcaccacga
     1561 agacaggcgc gtggaacggc gggttctcgc cccagttcgg gtagccgaag tcgaacatcg
     1621 ttcggccgat gacctgcggg ccgaacctgc cgaagttgtc cgcccacacc cgcgagtcca
     1681 ccgagtcctc gccgccgtcc atgccctgtt cccggcgcca gctgcgcagc gggaactgcc
     1741 agccgaggat ggcggtgaag agcgccatgc cgtccgcgtc ggccgattcc ggacccgcga
     1801 taccgtccag tgacatcgac atggccacca ctaccttggt catctccggc tcctctccgg
     1861 tccggggtgc tccatgcgcc cctctc
//
LOCUS       DASRPQ010001219         1199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2674143, whole genome shotgun sequence.
ACCESSION   DASRPQ010001219 DASRPQ010000000
VERSION     DASRPQ010001219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2674143"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..265
                     /locus_tag="VFD73_13970"
     CDS             <1..265
                     /locus_tag="VFD73_13970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75103.1"
                     /translation="DTSTDLPSFGTIQVGIPTRRRLVFVPLNQATVGPGYLKVAYDRK
                     QVKDAPSIDTDGELPAGDEEAVFKHYGLTYQPGANGERLLGRR"
     gene            290..463
                     /locus_tag="VFD73_13975"
     CDS             290..463
                     /locus_tag="VFD73_13975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75104.1"
                     /translation="MIALFLLLVIAAIVLGIVGVAAKGLLYLLIIGIAVFLVALILAA
                     LRMRRRPGRRPAR"
     gene            657..899
                     /locus_tag="VFD73_13980"
     CDS             657..899
                     /locus_tag="VFD73_13980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000014591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HZI75105.1"
                     /translation="MDPDIVQCRRKRKMAQGTVKWFNSDKGYGFIAPDDGTGDVFVHH
                     SVIQADGYRSLEENQRVEFTASPGAKGPQAENVQPI"
     gene            complement(983..>1199)
                     /locus_tag="VFD73_13985"
     CDS             complement(983..>1199)
                     /locus_tag="VFD73_13985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75106.1"
                     /translation="GSRASLVDAVMDLPEVQASTRLEATIPLGDGESLERLRERTEDA
                     VTRSAGSTTLLDANIPSGSQPEPGSGP"
BASE COUNT          218 a          376 c          387 g          218 t
ORIGIN      
        1 cgacaccagt actgacctgc cgtcgttcgg cacgatccag gtcgggatcc cgacccggcg
       61 ccggctcgta ttcgtgccct tgaaccaggc gaccgtgggt ccgggatacc tcaaggtcgc
      121 ctacgacagg aaacaggtga aagacgcccc gtcgattgat acggacggcg agctgcccgc
      181 aggcgatgaa gaggcagtat tcaagcatta cggcctgacc taccagccgg gcgctaacgg
      241 cgaacggctg ctgggccgcc gctgagtaga cgaacgaaat ggaggacgga tgattgccct
      301 tttcctgctg ctggtgatag ccgcgatcgt gctggggatc gtgggcgttg ccgcgaaagg
      361 gctgctgtac ctgctgatca ttggcatcgc ggtgttcctg gtcgctctca tcctggcggc
      421 cctgcggatg cggcgccggc ctggcaggcg tccggctcgg tagcaagctc attgacggcc
      481 caacgccggg cggaaaaatg cggctcggcc aagtatgata ctgttgactt gttctggtat
      541 agcaagaaat tcgtgttcgt gtcacagcgc ctgcgaagtt ctgacagcgg gcgccgcgga
      601 ttaccagagt ccggcttttg actacaggcg gtcgcggtag cccccgggcc atatacatgg
      661 acccggacat cgttcaatgt aggagaaagc gcaaaatggc tcaaggtaca gtgaagtggt
      721 tcaactccga caagggttat ggtttcatcg ccccagatga cggtacaggt gacgtcttcg
      781 ttcaccactc cgttattcag gctgacggtt accgtagcct cgaggaaaac cagcgggtgg
      841 agttcaccgc cagcccgggc gccaagggtc cccaggccga gaacgtccag cccatctgac
      901 ctccggcgca gcggtggagc gcgctagcca cggccggccg ctccaccgct ccgcgtcgtt
      961 cgcggctgcc cgagccccgt cgtcagggtc ctgaaccggg ctccggctgg ctgcctgacg
     1021 gtatattcgc gtccagcagc gtggtggagc cagccgagcg tgtgacggca tcctcggtcc
     1081 gctcccgcag acgctcgagc gattcgccgt cgccgagcgg gatagtggcc tccagacgcg
     1141 tgctggcctg cacctcgggc agatccatga ccgcatcaac caggctcgcc cggctgcca
//
LOCUS       DASRPQ010001220         1286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2674152, whole genome shotgun sequence.
ACCESSION   DASRPQ010001220 DASRPQ010000000
VERSION     DASRPQ010001220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2674152"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..215)
                     /locus_tag="VFD73_13990"
     CDS             complement(<1..215)
                     /locus_tag="VFD73_13990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylpyruvate dioxygenase"
                     /protein_id="HZI75107.1"
                     /translation="MQTGTAPSTSAATDTFPINGTDYVEFYVGNAKQASHYYRSAFGF
                     QLLAYRGPETGTRDRASYLLQQNKVRLV"
     gene            complement(302..>1286)
                     /locus_tag="VFD73_13995"
     CDS             complement(302..>1286)
                     /locus_tag="VFD73_13995"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI75108.1"
                     /translation="TQQLLAFSRQQILQPTDLKVNEVISDLVPALRLLLPANIELETA
                     LTPLGPLVRADRAHLDQVIINLTFNARDAMAGGGTLRLVTESRRLDERDGQRLIGIPM
                     RPGQYALISVIDTGYGMDARTLQQIFEPFFTTKPSGSGTGLGLATVYGIVKQSGGYVW
                     VESAVGSGTTVTVCLPESAVKIESPGHASAGQGPLECRPGTVLVIEDEDGVRDLVHRV
                     LQDQGHEVLAAADGDGALELLEEERDLDLVLSDIIVPGIGTSELDQKIRQLRPEVPVL
                     YMSGYSRDEMIERGLIDSGRPFLQKPFTAEELTEVVCRELGTEVNTRVVER"
BASE COUNT          228 a          426 c          388 g          244 t
ORIGIN      
        1 accagccgca ccttgttctg ttgcaggagg tagctggcgc ggtcccgagt gccggtctcc
       61 ggcccccgat atgccagcag ctgaaatccg aaggcgcttc gatagtaatg gctcgcctgc
      121 ttggcgttcc cgacgtagaa ctcgacgtag tcggttccgt tgatgggaaa ggtgtcggtg
      181 gcggcgctgg tcgaaggagc ggtgcccgtc tgcatggagc cccctaagct ggtaactggg
      241 cgcgagatgg ccgcggccaa cggcgcccgc aatctgatct aactaaaatc taatcatgta
      301 gttaccgctc caccacacgg gtgttgacct cggtcccgag ctcgcggcac accacctcgg
      361 tgagctcctc cgcggtgaac ggtttctgca gaaaggggcg accggagtcg atcaaccccc
      421 gctcgatcat ctcgtcccgc gaataccctg acatgtagag caccggtacc tccggtcgga
      481 gctggcgaat tttctggtcc agctcgctgg tgccgattcc gggaacgatg atatcggaga
      541 gcaccaagtc caggtccctc tcctcttcca gaagttccag ggcgccatcg ccatcagcgg
      601 cggcaagcac ctcatggcct tgatcctgga gaacccgatg caccaggtcc cggactccgt
      661 cctcgtcttc gatcaccagc accgttcccg gcctgcattc gagcggccct tgcccagccg
      721 acgcgtgccc gggactctcg atcttcactg ctgactctgg cagacacacg gtcaccgtcg
      781 ttccactgcc taccgcgctc tcgacccaga cgtaccctcc gctctgtttc acgattccgt
      841 acaccgtggc gagccccagg ccggtgccgg agcccgaggg tttggtcgtg aagaacggct
      901 cgaagatctg ctggagcgtg cgcgcatcca tgccatagcc ggtatcgatc accgagatca
      961 gggcgtactg cccgggccgc atcggaattc caatgaggcg ctggccgtcg cgctcgtcca
     1021 gccgccgcga ctcggtcacc agccgaaggg ttcccccgcc cgccatggcg tcccgcgcgt
     1081 tgaaggtcag gttgatgatc acctggtcga gatgagcacg atcggctcgc accagcggac
     1141 ccagtggcgt caacgccgtc tccagctcga tgttggccgg cagcagcagg cgaagcgctg
     1201 gcaccagatc cgagatcacc tcattgacct tgagatcggt gggctggaga atctgctgcc
     1261 ggctgaaggc gagcaattgt tgggtg
//
LOCUS       DASRPQ010001221         1404 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2961581, whole genome shotgun sequence.
ACCESSION   DASRPQ010001221 DASRPQ010000000
VERSION     DASRPQ010001221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1404
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2961581"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1404)
                     /locus_tag="VFD73_14000"
     CDS             complement(<1..>1404)
                     /locus_tag="VFD73_14000"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HZI75109.1"
                     /translation="VADIFGRGGRTSSVLPGDGATVTVVVQLTSTGTVQGHFLQPDKT
                     TPIPFSIVRLFASERLVGQLTTDGSTDPGSFNFSFVPAGPVRLEAQDPVTARVGVAAG
                     TIDHDGELLQLDVIAEGLGTVTGLVTSNGSPEPGATVDIFSGNYHAITVADSTGRYLI
                     SGVPEGHIVANASLQNGFLAGTNSGSLVGDGTQLNLDVALRGSGALTGQVLQADGATP
                     APASLVTVQVGGPGGGTLSVTTDADGNFSFPLVPAGTASVTVTVLGSIDRAQTSVEVL
                     SGNTVATNIRLNGIGEISGRTLDSAGNPVAGHVSISGTGAFPYSFALDTNRDGSFFLP
                     QVLAGTFTANLRVQNGTITLFGSTSSSVTPGQTAEITVQVQPSGSVLGTVLRSDGVTP
                     AAGANVTLALDRGGSVVVQAQTDGTFTANGLPLGGFTARVNDPVTTGQALLQGRNIAA
                     NGQIVDLGSIVLNDTPMA"
BASE COUNT          257 a          459 c          445 g          243 t
ORIGIN      
        1 gccatcggcg tatcattcag cacgatgctg ccgaggtcca cgatctgccc attcgcagcg
       61 atgttccggc cttgcagcag cgcctgcccg gtggtcaccg gatcgttgac gcgcgcggtg
      121 aatccgccca gcggcaagcc attcgcggta aatgtgccgt cggtctgggc ctgcaccacc
      181 acggagcccc cgcgatccag cgccagcgtc acattcgctc ccgccgctgg ggtcacgcca
      241 tcagagcgca ggaccgttcc aagcactgag ccgctgggct gcacctgcac ggtgatctct
      301 gccgtctgtc ccggcgtcac actcgacgaa gttgaaccaa acagcgtgat cgtgccgttc
      361 tgcactctca ggttggcggt gaaggtcccc gccagcactt gcggcaggaa gaatgagccg
      421 tctctgttgg tatccagggc aaagctgtag gggaaagcgc ccgtgccgga gatgcttaca
      481 tgtccggcca ccggattgcc cgctgaatcg agcgtccggc cgctgatctc gccgattccg
      541 ttcaaacgaa tgttcgtcgc caccgtgttg ccggagagga cctcaacgct ggtctgcgcg
      601 cgatcaatgc ttcccaacac tgtcaccgtc acagaggctg tgccggcagg gaccagtggg
      661 aagctgaaat taccgtcggc atcggtggta acggatagcg ttcccccgcc cgggcctcct
      721 acctgcacag tcaccagcga agccggggcc ggcgtggctc catcggcttg caagacctgc
      781 ccggtcagag cgccggaacc gcgcagcgcc acgtcgagat tcaactgcgt gccatcgccg
      841 accagggaac ctgaatttgt tccggcgagg aaaccattct gcaagctggc attggcgaca
      901 atatgccctt ccggcacgcc agagatcagg tagcggcccg tggaatcggc cacggtgatc
      961 gcatgataat tgccggagaa gatgtccacg gtggcgcccg gctcgggcga cccattgctg
     1021 gtcacaagac cagtcaccgt tcccagccct tcggcaatca cgtccagttg cagcagctcc
     1081 ccatcgtggt cgatggttcc ggcggccacg cccacgcggg ccgtgaccgg gtcctgggcc
     1141 tcaagacgga ccgggccggc gggaacaaag gagaagttga agctgccggg atcggtgctg
     1201 ccgtcggtgg tgagttgtcc caccagccgc tcgctggcga agagccgcac gatgctgaat
     1261 ggaataggag tggtcttgtc cggctgcagg aaatgtccct gcaccgtgcc ggtgctggtg
     1321 agttgcacca ccacggtcac cgtggcgccg tcgccgggaa gcacggaaga ggtgcggccg
     1381 ccgcggccaa agatgtcagc cact
//
LOCUS       DASRPQ010001222         2637 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_456332, whole genome shotgun sequence.
ACCESSION   DASRPQ010001222 DASRPQ010000000
VERSION     DASRPQ010001222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2637
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456332"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1351
                     /locus_tag="VFD73_14005"
     CDS             <1..1351
                     /locus_tag="VFD73_14005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75110.1"
                     /translation="GSVAALCFNVKGPDLCFLDQPANLSEEDQRQYRRLGLAAEPFRD
                     VHYYAPLKADGVNLNTLRTHEALSANTEPLVWGLREVLDYAEVVLNRDDIDAKADAFI
                     DFLAERVVGREYQDELLRGKPFLVQSFADLEEFFRRIFDFMETLGRGAEVWKTHHLAT
                     IRKVRNRLSNISTRSKGLVTDDGASNDLPWGTFRDRSVHVLDVAGLDPLAQDLVFARV
                     VSKLREHLERRDLGVDHVVVFVDELNKYAPADGPETYVRKMLLDLSERGRYLGLVLFS
                     AQQFRSQVQRRVVGNAGTGIYGRMDPDELATPGYATISPSTKIKLATLPKGELMLRHP
                     HFTQPIFVKFPRPPVLNGREGIERFPPAAELSFADAVSRQIRQHDRRVSSDAILALVE
                     GRREEDVRRALAATRRERPADVCAFFSACLGRRVNGEVSAPRRGIPALKRADDSYGR"
     gene            complement(1320..>2637)
                     /locus_tag="VFD73_14010"
     CDS             complement(1320..>2637)
                     /locus_tag="VFD73_14010"
                     /inference="COORDINATES: protein motif:HMM:NF012861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HZI75111.1"
                     /translation="SAAERKTLLVAGAAAGMAAIFATPLAAVLLAVELLLFEWKPRSF
                     IPVSAAAAVAAALRVPLLGEGPIFPTPAHPAMSSQELICALAIGIVAGFGSGVLTWLV
                     YTAEDAFAKLPFHYMWWPAIGGLFVGIGGLLYPRALGVGYDTIADLLQGHLTGAAVFG
                     LMSTKALIWAIALGSGTSGGVLAPLLIMGGALGSLEAGWLTVGDAGLWATISMAAMMG
                     GTMRSPLTAVAFMLELTDDIRVLPGLLIACAAAHAVTVLIMRRSILTEKVARRGYHVM
                     REYIVNPLARIRVADVMERDAPTLPANQKLDVILRGLAAHDQVLGRRYAWPLIDSDGR
                     LAGIVTRGDLVRMIERDESGEMTLLEAGSNKPIVTYPDELLEQAVDKMVRHDIGRLPV
                     VQRSDPKQLVGYLGRTGIAAGWRQIFEEERVREEGWLTGRKNRRPA"
BASE COUNT          490 a          854 c          825 g          468 t
ORIGIN      
        1 gggcagcgtc gcggctctct gcttcaacgt gaaagggccc gacctctgtt tccttgatca
       61 gccggcaaat ctgagcgagg aagaccagcg gcagtatcgc cgactcggac tggcggccga
      121 accgttccgc gacgtccact actatgcgcc gctcaaggcc gacggcgtca atctgaatac
      181 cctcaggact cacgaggcgc tgtcggcgaa taccgagccc ctggtctggg gtctccgaga
      241 ggtgctcgac tacgccgaag tggtcctcaa ccgggatgat atcgacgcca aggctgacgc
      301 cttcatcgac ttcctggccg agcgggtggt gggccgggaa taccaggacg agctattgag
      361 aggtaagccg ttcctggtgc agagctttgc cgacctggaa gagtttttcc gccgaatctt
      421 cgatttcatg gagacgctgg gacgcggggc cgaggtctgg aagactcatc acctcgctac
      481 catccgcaag gtgcgcaaca gactgagcaa catcagtact cgatctaagg ggctggtgac
      541 cgatgatgga gcgtccaacg atctcccgtg gggaaccttc cgcgatcgca gcgtgcatgt
      601 tctcgacgtc gccggcctcg atcctctggc tcaggacctg gtattcgccc gcgtcgtctc
      661 caagctccga gagcacctgg agcgtcggga ccttggcgtc gatcacgtcg tcgtgttcgt
      721 ggatgagctc aacaagtatg cgccggcaga tggacctgag acctatgtgc ggaagatgct
      781 cctggacctc tcggagcgcg gccggtatct ggggttggtt ctgttttcgg cccaacagtt
      841 ccggtctcag gtccagcgcc gagtagtggg caatgccgga accggcatct acggcagaat
      901 ggatcccgac gagctcgcca ctcccggcta cgccacgatc tctccgtcca ccaaaatcaa
      961 gctggcaacc ctcccgaagg gtgagctgat gctgcgccac ccgcacttca cccagccgat
     1021 tttcgtgaag tttcctcggc ctcctgtcct gaacggccga gaggggatcg agcgcttccc
     1081 gccggcggcc gaactgtcgt tcgccgacgc ggtgtcacgc cagatccggc agcacgaccg
     1141 ccgggtgtca tctgacgcga tactcgcctt ggtagaggga cggcgagagg aggacgtccg
     1201 tcgggcgctt gccgcgaccc gtcgtgaacg gccggcagac gtctgtgcct tcttctccgc
     1261 gtgtttgggg cgccgggtta acggcgaggt ttcggcaccc cgtaggggga ttccggcact
     1321 caagcgggcc gacgattctt acggccggta agccagcctt cctctcgcac ccgttcttcc
     1381 tcgaagatct ggcgccaacc ggccgcaatt cctgtccgac cgaggtagcc gactagctgc
     1441 ttcgggtcgg agcgctggac caccggcagc cgaccgatgt cgtgccgtac catcttatcg
     1501 actgcctgtt ccagcagctc atcggggtag gtcacgatgg gcttgttgct gcccgcctcc
     1561 agcagcgtca tctccccgct ctcatcccgc tctatcatgc gcaccagatc acctcgggtg
     1621 acgatgccgg ccagccgtcc atcgctgtcg atcagaggcc aggcgtagcg ccggcccagc
     1681 acctgatcgt gtgcggcgag cccccgaagg atcacatcca gtttttggtt cgccggaaga
     1741 gtgggcgcat cccgctccat cacgtcggcg acacggatgc gagccaacgg gttcacgatg
     1801 tactctcgca tcacgtgata gccacggcgt gcgaccttct cggtcaagat cgagcggcgc
     1861 atgatgagca ctgtcacggc atgagcggct gcacaggcga tgagtagtcc cggaagcacc
     1921 cggatgtcat cggtcagctc gagcatgaag gctacggcgg tcaggggaga tcgcatcgtg
     1981 ccgcccatca tcgctgccat gctgatggtg gcccataatc cggcatcacc cacggtgagc
     2041 cagcccgcct ccaggctgcc gagcgcgccg cccatgatga ggagcggggc gaggacgcca
     2101 ccggaagtgc cggagccaag cgcaatcgcc cagatcagcg ctttggtgga catcagtccg
     2161 aagactgccg caccggtgag gtgcccctgc aaaaggtcgg cgattgtatc gtagccgacg
     2221 ccgagtgccc gtggatacaa caatccgcca attccgacaa acaacccgcc gatcgccggc
     2281 caccacatat agtggaaggg aagctttgcg aacgcgtctt cagcggtgta gaccagccag
     2341 gtgaggactc cagagccgaa gcccgccacg atgccgatag ccagagcaca aatcagctcc
     2401 tggctcgaca tcgccgggtg cgcgggggtg gggaagatcg ggccctctcc gagcagcgga
     2461 acccgcagtg cggcggccac cgccgctgcc gcggacaccg ggatgaagct ccgtggcttc
     2521 cactcgaaga gcagcaactc gactgccagg agaacggcag ccagcggtgt ggcaaagatg
     2581 gccgccattc cggcggcggc gcccgccacc agcaaggttt tccgttcagc tgctgag
//
LOCUS       DASRPQ010001223         1359 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4541617, whole genome shotgun sequence.
ACCESSION   DASRPQ010001223 DASRPQ010000000
VERSION     DASRPQ010001223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1359)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1359)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1359
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4541617"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..768)
                     /locus_tag="VFD73_14015"
     CDS             complement(<1..768)
                     /locus_tag="VFD73_14015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75112.1"
                     /translation="MMKKKTRLKTSPVPTDDAIEELLWDCLAEVPFLQIQKVEQRVFA
                     DATRPEIVGRIRIGAAERVVLAEVRANGQPRLVREAIDNILRYRQTYADAYAVVIAPA
                     FSPQALKICRQEGIGWLDLSGNCGLNFDFVYISKSGRVPARRRQPRSRSWYSPRVERV
                     LRLLLLHPQRVWKTRELALEAHVKPGQALHIRHHLAECGWVQDDGQGFRVSEPGLLLD
                     AWAAHYAAGRSTERVFQSSRSVVELEALLASVCQEQVI"
     gene            1154..>1359
                     /locus_tag="VFD73_14020"
     CDS             1154..>1359
                     /locus_tag="VFD73_14020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75113.1"
                     /translation="MKKLSCLLSATLTLLMLPFSAWADAVVVFNEVMYHPANTETNFE
                     WLELHNQLAVDVDISEWSIAGGVQ"
BASE COUNT          234 a          466 c          411 g          248 t
ORIGIN      
        1 aatcacctgt tcctggcaaa ccgaggcgag cagggcctcg agctcgacca cgctgcgcga
       61 cgattggaag acgcgctcgg tgctgcggcc ggccgcgtaa tgggccgccc aggcatccag
      121 cagcaagccg ggctcgctca cgcgaaaacc ctggccgtca tcctggaccc agccgcactc
      181 ggccaggtga tgccggatgt ggagcgcctg gccgggcttg acgtgcgctt ccagggccag
      241 ctcgcgcgtt ttccagacgc gctgcggatg gagcaacagc aggcgcaaca cccgctccac
      301 ccgcggcgaa taccaggacc gggatctcgg ctgacgacga cgggccggga cccgccccga
      361 cttgctgata tagacaaagt cgaagttcaa cccgcaattg ccggacaaat ccagccagcc
      421 gatcccctcc tgccggcaga tcttcagcgc ctgcggcgaa aaagccgggg cgatcaccac
      481 cgcgtaggcg tcggcgtagg tctgtcgata gcggagaata ttatcgatcg cttcgcgcac
      541 cagccggggc tggccgttgg cccggacctc cgccagcacc acccgctccg ccgcgccgat
      601 gcggatgcgt cccacgatct ccggccgggt ggcatccgca aacacgcgct gctccacctt
      661 ttggatttgc agaaagggca cctccgccag gcaatcccac aaaagctctt cgatggcgtc
      721 gtcggtgggc accgggctgg ttttcaatcg ggtcttcttc ttcatcatcg gtattcctgg
      781 tttgaccccg gctgagcccg gggccaatgc ccctcagcaa gtgaagttcc agcagcccgg
      841 acccgcgtcc aggcgcgcat tttactgcga cgacgcccct cgggagtgcg ctgccgatcc
      901 gccacgctgt acggaattgg gacaacccga acgatcggcc agccactcgc gggggcgtcc
      961 tcgcgtcctt cacctccttc gttggtcaaa cccctcagcc ggtcgcgatc cgcgccggat
     1021 tcgtgctgga tttcccgtcc cggcttgtta acctcgccgg cattcacccg gtccaggccg
     1081 tttccgtctt tggcgggacg cgtcgtggtc ggatggtcca gaatccaact cagaaccggt
     1141 aatccgaggc cctatgaaga agttgtcctg cctgttgtct gccacgctca cgttgctgat
     1201 gcttccgttc tcggcttggg ccgacgcggt ggtcgtgttc aacgaggtca tgtatcaccc
     1261 ggccaacacc gagacgaatt tcgagtggct ggagctgcac aaccagctgg cggtcgacgt
     1321 ggacatctcc gaatggtcca tcgccggggg cgttcagtt
//
LOCUS       DASRPQ010001224         1393 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4541675, whole genome shotgun sequence.
ACCESSION   DASRPQ010001224 DASRPQ010000000
VERSION     DASRPQ010001224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1393
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4541675"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            172..954
                     /locus_tag="VFD73_14025"
     CDS             172..954
                     /locus_tag="VFD73_14025"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HZI75114.1"
                     /translation="MLPLRQYGAYTPSSRPHSNQAGSAGYNIFAILGEVQVPVPVSHE
                     RRQDQPEALLSYIEKRIKQAVVSGELRPGAKLSPSAVAADLGVSHIPVREALTSLAAS
                     GYLEHRPRVGFFVRVLSSDDLADIYHWREILEREAFIMAIPKLTGDDIEEMSRLCGQM
                     RKLTGPGQRREYLNLNRQFHFIAFRRAGSDRLMRFLAYLWDVAAPYTFTGLVDINEAR
                     HDHEQMMDLFEARDVDGIIDLMARHRGQAVKAVARWEARSRP"
BASE COUNT          237 a          429 c          443 g          284 t
ORIGIN      
        1 gccgcggctg ccgtgggcgg ccgcccttga ggtggagcgg ggcgctcagc tctggtcgct
       61 gcgccgccgg gtctcccaat agccaatccc ggctgtatgc ggcgctgccg ccattacccg
      121 tgtcacattg aacgggtcaa ttcacttaaa gtccgctgca tttacgcggt catgctgccg
      181 ctccggcagt acggcgcata cactcccagc agtcggccgc attcgaatca ggcgggatct
      241 gctggctata atatattcgc gatcctgggg gaggtgcagg tacccgtgcc ggtctctcac
      301 gagcgccgtc aggatcagcc tgaggccctg ctgtcctaca tcgagaaacg aatcaaacag
      361 gcggttgttt cgggggagct aagacccggg gcgaagctat cacccagcgc ggtcgcggct
      421 gatctgggcg tatctcacat accggtgcgc gaggcgctca cctctctggc cgcgtccgga
      481 tatctcgagc acaggccgcg ggtcggcttc ttcgtccggg tcctgtcgtc cgatgacctg
      541 gccgatattt accactggcg ggagatactc gagcgggagg cattcatcat ggccatcccc
      601 aagctcacgg gtgacgatat cgaggaaatg agcaggctgt gcggccagat gcggaagctg
      661 accggacccg ggcagcgccg tgaatacctg aaccttaatc gccagttcca tttcatcgcc
      721 ttccgccggg ccgggagcga ccggctgatg cgcttcctcg cctatctatg ggatgttgcc
      781 gctccttata cttttacggg ccttgtagat atcaacgagg cgcgtcatga ccacgagcag
      841 atgatggacc tgttcgaggc gcgtgatgtg gacgggatca tcgacttgat ggcgcgacac
      901 cgcggccagg ccgtcaaggc cgtcgcccgc tgggaagccc gctcccgccc ctgagggccg
      961 atgtccttct tcggtggttg cggtgagtaa caggcagaac gttaccgtcg gcggtttttc
     1021 agctattctc ggtcgtccac gtccacatgg ttacccggtt ttccacagcc cccgcagccg
     1081 cccctgctaa ggcgagtccg tcatcgtatc cacagctcgt agatcatctt cgccgcttcg
     1141 tccacaggtt ggccggcctt gtgcacatgg tgatccacag acccgcggag gtaccgtgct
     1201 tgttcctggg cagtgcgtac agaaccgaga gacgccgggt aggggcccag gtaggggtgg
     1261 gtttggggcg cgcggcaagg cggtcactat gagcagagcc tgcgacaccg cgattgctgc
     1321 ggaggttcag catcgccgca gggtcgtcgt ggatgtcatc ctcctgctga tgaggaacgg
     1381 acgcatcctg ttg
//
LOCUS       DASRPQ010001225         3700 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_456439, whole genome shotgun sequence.
ACCESSION   DASRPQ010001225 DASRPQ010000000
VERSION     DASRPQ010001225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3700
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456439"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..338)
                     /locus_tag="VFD73_14030"
     CDS             complement(<1..338)
                     /locus_tag="VFD73_14030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75115.1"
                     /translation="MPRWVRAPTIIAEALVGVSDPLLSALGRLEEVRPGEVAAALAQS
                     LALPEASETPPGWLLPEQVSSFRRIVAALRAHHGALLADPVGSGKTYVALATASVLNR
                     GATACIVPATL"
     gene            complement(301..3282)
                     /locus_tag="VFD73_14035"
     CDS             complement(301..3282)
                     /locus_tag="VFD73_14035"
                     /inference="COORDINATES: protein motif:HMM:NF014442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HZI75116.1"
                     /translation="MVTSLGHEALFEAVPDQVWNTARQRLLRVVAVGRSDGLPWFAIE
                     TSFPEQDSLRLARRIRARGKSAIVVALDSPARQLAITAAFNQLPHLTVDLADPAPELL
                     ASIARLAGAAGAGPMGFAARAADALSTESVGRRFFNAFRASVDQIGRELPCRLESSDR
                     HSFVLLQLTRVLFLYFIQSKGWLAGRDRFLAEEIDRCVSRGRRIHRDLLRPLFFGTLN
                     CPRDQRSRLALGFGAIPFLNGGLFEPHPLERQCKADIPNVLWCTAFDNVFERFHFTVS
                     ENTLGQSVAPDMLGRVFEGVMAPEARRASGTFYTPANLVQRILDSALIAFLAIRLKCS
                     ESIAQQRLEDPDRAAQLLLAKITLLDPAAGSGAFLLCALERLSKAATSQRTRWAGAKR
                     RVLRHNLFGVDLNAAAVRLAELRLWLAVIADEPADHPDQVSPLPNLDCLVRQGDSLFD
                     PIGLDSSDSPRVPETAPARQLARLRHRVITASGRMKRALECQLRTAEAQMFEGSLLQA
                     KSRHQAAIAECLTQARATDLFGKPRGLNSELAVELRRLRAGLKRIRRAQKYLSQEREV
                     PWFHYHTHFADVFAQGGFQIVLGNPPWLRSEAIAVERRRELTSRYRWWRGMRGTYGKS
                     PDLAVAFLERALQLVQSNGVVAMLVPSKIATAAYGATARHALASTATLHALADLSRVE
                     AGAFDATVYPLAIVAGKERPPPHHLVKTSLDLASEGRVPQSELRGGGPWVLVDRGLHK
                     LVAAMEADHPRLREAISCHLGLKTGLDEVFLSPPEWIEPELLRWAVRGRDLRPFAWKR
                     KVRLLWTHTCNGYAIPRLPAGAMRYLIPHEKALRARKDYRDGPWWAMFRTRPACAPYR
                     IVWSDLSRQLTAIALTTESDQQDIPLNTCYVAPAASSGRAQGIAAWLNSSWIRAIARL
                     SAPPASGGFARFNAATVGGVPLAVSALDDARLAELARAGRSGEEVQAPLDALVADHLG
                     LSQSAQRKLRASLGPRPDHHR"
     gene            3458..>3700
                     /locus_tag="VFD73_14040"
     CDS             3458..>3700
                     /locus_tag="VFD73_14040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75117.1"
                     /translation="MTRFLLLRVLWILLLVVVPAGLNGQTATDSGTFVVRHAGDTVAV
                     ERFTRGATKLEGTLQLKNAKRTSERYSGVIAPDASMP"
BASE COUNT          730 a         1156 c         1178 g          636 t
ORIGIN      
        1 agcgtagccg ggacaatgca cgctgttgcc cctcgattca gcaccgaggc tgtggcgagc
       61 gccacatagg tcttgccact cccaaccgga tcggccagaa gtgcgccatg atgtgcccga
      121 agcgctgcga caattctgcg aaagctggag acctgttcgg ggagcagcca accgggagga
      181 gtttctgaag cctctggcag ggccagactc tgcgccaatg ccgcagccac ctcacctggc
      241 ctcacttctt ccaggcggcc gagcgcactg agcaggggat cggaaactcc gaccagcgct
      301 tcagcgatga tggtcggggc gcggacccag cgaggcacgg agcttacgtt gcgccgactg
      361 ggagagcccg aggtgatcgg ccaccagcgc atccagtggg gcttgaacct cctcgcctga
      421 gcggccggcc cgggccagct ccgccagtcg agcgtcatcc agtgccgaga cggccagcgg
      481 gacacccccg actgtggctg cattgaaccg ggcaaatcct cccgaagccg gtggcgcgct
      541 cagccgggcg atggcgcgta tccagctgga gttcagccat gcggcgatgc cctgcgcccg
      601 cccgctcgac gcagcaggag cgacgtagca ggtgttcagc ggaatgtcct gctgatcgga
      661 ttctgtggtg agagcgatag cggtgagctg gcgggacaga tcgctccaga ctatccgata
      721 cggtgcgcac gccggccgag ttcgaaacat ggcccaccat ggcccgtccc ggtaatcctt
      781 gcgggcacga agagctttct cgtgtgggat gagatagcgc atggcgcctg ccggcaatcg
      841 gggaatggcg tacccattgc aggtgtgagt ccagagcagc cgcaccttgc gtttccatgc
      901 aaaggggcgc aggtcccgtc ctcgaacggc ccacctgagc agttcgggtt cgatccactc
      961 cggcggactg agaaagacct catcgagccc ggtcttgagt ccgagatgac acgagattgc
     1021 ctctcgaaga cggggatgat ctgcctccat cgcagccacg agcttgtgca ggcctcgatc
     1081 caccagcacc catggtccgc caccgcgaag ctcggactgg ggaacgcgtc cttcgcttgc
     1141 gagatccagg gaggttttca ccaggtgatg gggaggcgga cgttccttgc cagctacaat
     1201 ggccagcggg tagaccgtgg cgtcgaacgc gccagcctcc actcggctga gatcggccag
     1261 cgcatggagc gttgcggtgc tggcgagcgc atgcctggcc gtggcaccat aagcggcagt
     1321 agcgatcttg gagggcacca gcattgccac aacgccgttg ctttgcacga gctgcagggc
     1381 ccgctccaga aatgccactg ctaagtcggg cgacttcccg tacgtcccac gcattccgcg
     1441 ccaccagcgg tagcggctgg tcaactccct gcgccgctca acagcgattg cctcggatct
     1501 gagccatggt ggattcccca aaacaatctg gaagccgccc tgggcaaaga cgtcagcgaa
     1561 gtgagtgtga taatggaacc agggaacttc ccgttcttgc gagaggtatt tctgcgctcg
     1621 gcggattcgt ttgaggccgg cacgcagtcg acgcagctct acagccaact cgctgttcag
     1681 gccgcgaggt ttgccgaaga ggtcggtcgc tcgagcctgg gtcagacact cagcgattgc
     1741 cgcttgatgg cgtgactttg cctgcaacag cgagccttcg aacatctgcg cctctgccgt
     1801 gcgaagctgg cattcgagcg cacgcttcat tctgccggag gctgtgatca cccgatggcg
     1861 aagtcgagcc agctgccttg ccggcgcggt ctcaggaact cgaggcgaat cggaagagtc
     1921 gagacctatc gggtcgaaca ggctgtcgcc ctggcgaacc agacaatcga ggttgggaag
     1981 ggggctgacc tgatcagggt gatctgccgg ctcgtcggca atcacagcga gccagagccg
     2041 caactcggcc agccgaacag ctgcggcatt gaggtccacc ccgaagagat tgtgccgcag
     2101 aaccctgcgt ttggcaccgg cccaacgggt gcgctgtgag gttgccgcct tggagaggcg
     2161 ctccagcgca caaagcagaa acgcgcccga gccggcagca ggatcgagca gggtgatctt
     2221 tgccaggagg agttgggctg cccggtccgg atcctcgaga cgctgctggg ctatggattc
     2281 gctacacttc agccggatgg cgagaaacgc aatgagcgcc gaatccagaa tccgttgcac
     2341 cagatttgca ggcgtgtaga aggtgcccga agctcgtcga gcttcgggtg ccatgactcc
     2401 ttcgaacacc ctgccgagca tatcaggggc aacgctctgg cccagagtgt tttccgagac
     2461 ggtgaagtgg aagcgctcga agacgttgtc gaacgcggtg caccagagaa cgttgggtat
     2521 gtccgccttg cattgccgct ccaatgggtg cggctcgaac agaccaccgt tcaggaacgg
     2581 aatggcaccg aagcctagtg ccagccggct gcgttggtca cgagggcaat tcagggtacc
     2641 gaagaacagt ggccgcagca gatcgcgatg tatccttcgg ccccgggaca cgcatcggtc
     2701 gatctcctcg gccagaaaac ggtcgcggcc tgccagccag cccttgcttt gaatgaagta
     2761 caggaacaag acgcgcgtga gttgaagcag tacgaagctg tggcggtcgc tgctctcgag
     2821 gcggcaaggg agttcccgac cgatttggtc gacgctggcc cggaatgcgt tgaagaaccg
     2881 acgcccgacc gactccgtcg acagagcatc cgctgcccga gcggcaaacc ccataggtcc
     2941 agcacccgcg gcgccggcga gccgggcaat ggaggccagc agctcgggcg cggggtctgc
     3001 cagatcgacc gtgagatggg gcagctgatt gaacgccgct gtgatggcaa gctgccgcgc
     3061 aggactgtcg agagccacca caatggccga cttgccgcgg gcccgaattc ggcgcgccag
     3121 ccgcagcgag tcctgctccg gaaacgaggt ctcgattgca aaccaaggca gcccatccga
     3181 ccggcccacc gccacgactc taagaaggcg ctggcgcgct gtattccaca cctgatccgg
     3241 caccgcctcg aacagcgcct cgtgacccag actggtgacc aaacgaggaa catccaccaa
     3301 agaacggatc gattgcagga cccggtgaag ctccgttcgg ggtggacatg gaggcattag
     3361 tccccacgct agcttgcagc aacccgggta ccggcatcag attgccgcca ctcgtgcccg
     3421 attaatgttc tctgtgtctc cttctcccaa tgctgacgtg accagatttc tcttgctgcg
     3481 tgtcctctgg attctgctcc tcgttgtggt accagccggc ctgaacggac agactgctac
     3541 tgatagcggc acctttgtcg tccgccatgc cggcgatacc gttgcagttg agaggtttac
     3601 ccggggcgcg acaaagctcg aaggcactct ccaactcaag aacgccaagc gcacatcgga
     3661 gcggtattcc ggcgtcatcg cacccgatgc cagtatgccg
//
LOCUS       DASRPQ010001226         1079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_456510, whole genome shotgun sequence.
ACCESSION   DASRPQ010001226 DASRPQ010000000
VERSION     DASRPQ010001226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456510"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..213
                     /locus_tag="VFD73_14045"
     CDS             <1..213
                     /locus_tag="VFD73_14045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75118.1"
                     /translation="EVVEALRAEPGTKAIPVVILTSKSMTPQDKERLRGRITYVARKT
                     EFDLSGLAGLLRWASASRQSPAPEPG"
     gene            210..596
                     /locus_tag="VFD73_14050"
     CDS             210..596
                     /locus_tag="VFD73_14050"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI75119.1"
                     /translation="MTQVILVVEDNERNLKLLRDVLEYAGYGVRAARTAEDGIALAVS
                     EPPDLVLMDLQLPGIDGIEALRRLRESPRTANIPVVAVTAQAMKQDRERVLQAGFNGY
                     VEKPISVRAFPDQVRRFLPAEEVGTG"
     gene            593..>1079
                     /locus_tag="VFD73_14055"
     CDS             593..>1079
                     /locus_tag="VFD73_14055"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI75120.1"
                     /translation="MNPDPLILVVDDLARNVRLLEAVLSPKGFRVAAASSGEQALDVL
                     SKEHPDVVVLDILMPGMDGYEVCRRIRQDPGTAFLPVIMITASGEEEKIRAIEAGADD
                     FVSKPFDQAELLARVRSLVRIKRYHDTIEHQADELAGWNRELEQRVQDQIEQLERVSR
                     LR"
BASE COUNT          194 a          336 c          379 g          170 t
ORIGIN      
        1 gaggtcgtgg aggcgctgcg ggcagaaccc ggcacgaagg ccatccccgt ggtcatcctg
       61 acgtccaagt caatgactcc acaggacaag gagcggctgc gggggcgcat cacgtatgtg
      121 gcgcgcaaaa cggagttcga cctgtcgggc ctcgcgggac tcctgcgctg ggcgagcgcg
      181 agccgccagt ccccggctcc ggagccggga tgacccaggt aatccttgtc gtggaggata
      241 acgagcggaa tctcaaactg ctgcgcgacg tgcttgaata cgcgggctac ggcgtgcgtg
      301 cggcccggac ggccgaggac ggcatcgccc tggcggtcag cgagcctccc gatctcgttc
      361 tcatggatct ccagctgccc ggcatcgatg gcatagaggc tcttcgccgg ctgcgcgaga
      421 gcccgcggac agcgaacata cccgtggtcg cggtaacggc tcaggccatg aagcaggacc
      481 gggagcgggt cctgcaggct ggcttcaacg ggtacgtgga gaagccgatc agcgtccgcg
      541 cctttcccga tcaggttcgc aggttcctcc cagctgagga ggtggggact gggtgaatcc
      601 ggacccgctc atactcgtcg tggacgatct ggcccggaac gtccgcctgc ttgaggcggt
      661 gctgtcgccg aagggattcc gggtggccgc cgcgtcatcc ggcgagcagg ccctggacgt
      721 gctgagcaag gaacacccag acgtcgttgt gctggacatc ctgatgcccg ggatggacgg
      781 atacgaggtc tgccgccgga tccgccagga tcccgggacg gctttcctgc cagtgatcat
      841 gatcactgcg agtggggaag aggagaagat ccgcgccatc gaggccggtg ccgacgactt
      901 cgtcagcaag cctttcgacc aggccgagct gctggcccgg gtgcgctccc tggtccggat
      961 caagcgatac cacgacacga tcgaacatca ggcggacgag ctggccggct ggaaccgtga
     1021 gctcgagcag cgcgtccagg accagattga gcagctggaa cgcgtgagcc ggctacgcc
//
LOCUS       DASRPQ010001227         1202 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3603061, whole genome shotgun sequence.
ACCESSION   DASRPQ010001227 DASRPQ010000000
VERSION     DASRPQ010001227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1202
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3603061"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="VFD73_14060"
     CDS             complement(<1..263)
                     /locus_tag="VFD73_14060"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA family NAD(P)-binding protein"
                     /protein_id="HZI75121.1"
                     /translation="MYLITGGAGFYGVVSDLAVELLRAKGEQVRMMVHLRDQARAKRL
                     RELGAEIVVGDLSSPANVVDAMRDVTRVFFNTNITLDYLQQTAV"
     gene            complement(620..838)
                     /locus_tag="VFD73_14065"
     CDS             complement(620..838)
                     /locus_tag="VFD73_14065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75122.1"
                     /translation="MKITKARPNWGWGNKEPVPIFTEAEIRAACKDFGLPDVDTDGVI
                     DRLKENRKRVRAAGADVGKGGPPERDAG"
     gene            997..>1202
                     /locus_tag="VFD73_14070"
     CDS             997..>1202
                     /locus_tag="VFD73_14070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75123.1"
                     /translation="MDPDDLVDPGDAAVQALLALTAESTHDDEKRDMLIDGILTLPSL
                     TEWPPERRQMLLETCQFIKGLAGDL"
BASE COUNT          220 a          388 c          356 g          238 t
ORIGIN      
        1 accgccgtct gctggagata gtcgagcgtg atgttggtgt tgaagaacac gcgggtgaca
       61 tctcgcatcg cgtcgacgac gttggccgga ctgctgagat cacccaccac gatttcggcc
      121 ccgagttcgc gaagccgctt cgcgcgggcc tggtcgcgga ggtgcaccat catcctgacc
      181 tgctcacctt tggcccgcag cagctcgaca gccaagtcgc tgaccacgcc gtaaaacccg
      241 gctccgccag tgatcagata catggctgcc aatttagccg ccgaggcccg ctaaacggac
      301 cgctaatgct gatcggactg gtgaatgagc taccggaccg gacgaacgcg ccgcgtatag
      361 catcccctcg tccttatgag ggataaatga tgaccgctcg cttgcgggga gctggaccac
      421 cacgaaccgg cccgtcacat cgcctcggtc aaccgcatac ggaccggatg gatccgcagc
      481 gccagcatgt agaggtccag ctctcgagac agaacgggca gtcgtcgagt cgggtaacac
      541 aaacccagcg atccagctgg tctcacctgc ccaggctgcg gcggcggcca cgtctgggcc
      601 cgtctggtga tatccgctgt cagccagcgt ctcgttcagg tggtcccccc ttgccaacat
      661 cggctccggc agctcgcact ctcttgcggt tctctttgag tcggtcaatg acgccgtccg
      721 tgtcaacatc cggcagcccg aagtccttgc aggccgcgcg gatctcggcc tcggtaaaga
      781 tcggcacagg ctccttgttc ccccagcccc agttagggcg ggctttagtg atcttcattc
      841 ggatcgtcgc attcttagaa aggggtagct agggccactc cgtctacggc tctgggtggg
      901 ccgtcggtat tcagattctg ctccgcctcg tgccccactg gggtcgtttt gctcagcaat
      961 gcagggccgt cggtacccac gtctacggtg cccaacgtgg atcccgatga ccttgttgat
     1021 ccgggtgacg ctgcggtcca agctctgctg gccctcaccg cagagagcac ccacgatgat
     1081 gaaaaacggg acatgctgat cgacggcatt ctgacccttc cgtcgctgac ggagtggccg
     1141 ccagagcggc ggcaaatgtt gctagagact tgtcaattca tcaagggcct tgccggggac
     1201 ct
//
LOCUS       DASRPQ010001228         1327 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3298709, whole genome shotgun sequence.
ACCESSION   DASRPQ010001228 DASRPQ010000000
VERSION     DASRPQ010001228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1327
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3298709"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..558
                     /locus_tag="VFD73_14075"
     CDS             <1..558
                     /locus_tag="VFD73_14075"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZI75124.1"
                     /translation="RDHALLLLDVQTGLRVSELTGLARQDAHLGAGPHVRCHGKGRKD
                     RATPLTAQTVKVMRTWLAELSPDPAGPLFPTQPGGRLSRDAVERLVAKHAATAADACP
                     SVKDKHVTPHTLRHTAAMTLLKAGVDTSVIALWLGHEGTETTQIYLHADMSIKEQALA
                     RVQQPGTSPGRYRPPDSLLAFLDNL"
     gene            complement(580..>1327)
                     /locus_tag="VFD73_14080"
     CDS             complement(580..>1327)
                     /locus_tag="VFD73_14080"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZI75125.1"
                     /translation="VENEVGVVAFLGQIRESLKAGEFRPAEVRQVVIPKGNTGKFRKL
                     GIPAIADRVVQASLKLVLEPIFEADFKPCSYGFRPNRRAHDAISEIYHLASRPKNYHW
                     VFETGIKACFDEISHTALMNRLRARIKDKRICSLVKAFLKSGVLTELGDREETWTGTP
                     QGGILSPLLANIALSALDDHFDQQWRQEMGTSGQRQKRRRHGKGNWKLIRYADLCRAR
                     HKSAYAESGVMPTRLLEGLPGEQVVVLGAA"
BASE COUNT          234 a          494 c          374 g          225 t
ORIGIN      
        1 cgcgatcacg ccctgctcct gctcgacgtc cagaccgggc tgcgggtatc agagctcacc
       61 ggcctggccc gccaggacgc gcacctgggc gctggcccgc acgtccgctg ccacggcaag
      121 ggccgcaagg accgggccac cccgctcacc gcccagaccg tcaaggtcat gcggacctgg
      181 ctcgccgagc tcagccccga ccccgccggc ccgctgttcc ccacccagcc cggcggccgg
      241 ctctcccgcg acgccgtcga gcggctcgtc gccaagcacg cggccacagc cgcagatgcc
      301 tgcccgtcag tgaaggacaa gcacgtcacc ccgcacacac tcaggcacac cgccgccatg
      361 acgctcctga aggccggcgt cgacacctcg gtcatcgccc tctggctcgg ccacgagggc
      421 accgagacca cccagatcta ccttcatgcc gacatgagca tcaaggagca ggccctcgcc
      481 cgcgtccagc agcccggcac cagccccggc cgctaccggc caccggacag cctgctcgcg
      541 ttcctcgaca acctctagcc accaccagca cccaccgggt tatgccgccc ccagaacgac
      601 gacttgctca ccaggcaggc cctccagcag tcgggtcggc ataaccccgg actcggcata
      661 agccgactta tgccgagctc ggcataagtc ggcatagcgg atgagtttcc agtttccctt
      721 gccgtgtctt ctgcgctttt gccgctgccc gctggtgccc atctcctggc gccattgctg
      781 gtcgaaatgg tcgtccagcg ctgacaaggc aatattggcg agcaacggtg agagaattcc
      841 gccctgcggg gttccggtcc acgtctcttc ccggtctccg agttcggtga ggaccccgga
      901 tttcaggaac gccttcacta gcgagcagat acgcttgtcc ttgatcctcg cccgcaggcg
      961 attcatcaaa gccgtatgcg aaatttcgtc gaaacaggct ttgatgccgg tctcaaatac
     1021 ccagtggtag ttctttgggc gggaggccag atggtagatc tcggagatcg cgtcatgcgc
     1081 ccgccggttc gggcggaacc catacgagca cggcttgaaa tcagcctcga agatgggctc
     1141 gagcactagt ttcaggctgg cctggaccac ccggtcggcg atggcgggga tacccagctt
     1201 ccggaatttc ccggtatttc ccttaggtat caccacctgc cgtacttcgg ccggccggaa
     1261 ttcgcccgct ttcagcgatt cccggatctg gcccaggaaa gccacgaccc cgacctcatt
     1321 ctcgacc
//
LOCUS       DASRPQ010001229         1415 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2674921, whole genome shotgun sequence.
ACCESSION   DASRPQ010001229 DASRPQ010000000
VERSION     DASRPQ010001229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1415
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2674921"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..236
                     /locus_tag="VFD73_14085"
     CDS             <1..236
                     /locus_tag="VFD73_14085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75126.1"
                     /translation="VLLAGDVTYDLSSLHAQLDQGFIAEVEQHHRTLPRVLSLVEGGV
                     AYLPSHDPDSPARLASGTLVGTKIAALVKKAVE"
     gene            590..994
                     /locus_tag="VFD73_14090"
     CDS             590..994
                     /locus_tag="VFD73_14090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75127.1"
                     /translation="MAYLVGALLALAVGGMATRLRLDRDRAFYPTVLIIVASYYALFA
                     VIGGSIHALLAESVGIAIFLAAALVGFQGSLWLVVSGLAAHGVYDAFHARMITNPGVP
                     LWWAPFCLAYDVVAAGYLCYLLLRRVIPVQPG"
     gene            1048..>1415
                     /locus_tag="VFD73_14095"
     CDS             1048..>1415
                     /locus_tag="VFD73_14095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75128.1"
                     /translation="MDSPGRRRVAIFVIPLIICLVMARQAVPHVRAVDFVLVFASGVL
                     FGVCLLRLIQLVREGRFSYVAPPSSGAQDIAALAGQGVIPQDPDYEARVRESFRRQSH
                     MATLGAEIVFIAPGEVHLAFP"
BASE COUNT          236 a          413 c          449 g          317 t
ORIGIN      
        1 acgtgctgct cgccggtgac gtgacctatg acctctcttc gctgcatgcc cagctggatc
       61 aggggttcat tgccgaggtc gagcagcatc accgaacact gcctcgagtg ctgtccctgg
      121 tggagggcgg cgtggcatac ctgccgagcc atgatccaga ctcaccagcg cgactcgcat
      181 ccggtacatt ggtggggacc aagatcgccg cgctggtgaa gaaagcggtg gagtgagcga
      241 ggccatctgt gtcgaccacc gatatcctac ggcaatactt tcaagcgctc gcgcaaaacg
      301 ggagctggca gtcgttcctg gcggatgatc tcaggttcac cagcttcacc agccccagaa
      361 aggagctgac cggcaaggcc gcctacctcg agtccaccaa gcgattcttc tcgatggtgg
      421 tctcgctgga agtgagagat ctgttggtcc agggagagaa ggcttgtgcc ttgacgcggt
      481 atcagcttcg gtcactgaac gggacgcggc tccgttcccg aagtaggcgg cccgaatctg
      541 acgggggtcc ccgtttcgct gagctggtgg agaacacctg gagtgtccat tggcatatct
      601 cgtcggagcg cttctggcat tggcggtggg gggcatggcc acgcggcttc gtctggatcg
      661 cgaccgggcg ttctatccca ctgtgctgat catcgttgct tcctattatg ctctcttcgc
      721 cgtgatcggc ggctccattc acgccttgct ggccgaaagc gtgggcatcg ccatctttct
      781 tgctgcggca ctcgtcggct ttcaaggctc gttgtggctg gtggtgtcgg ggctcgcggc
      841 acatggggtc tatgatgcct ttcacgctcg aatgatcacc aatccaggcg tcccgctctg
      901 gtgggcaccg ttctgccttg catatgatgt ggtggcggct ggatacctct gctatctcct
      961 gctacggcgg gtgatcccgg tgcagccagg ctgagaggat gcaaatagca caatgcgtat
     1021 tccggacctc agagaaagga gcttgggatg gactcacccg gccggcgtcg cgtcgccatt
     1081 ttcgtcatac ctcttatcat ctgtctggtg atggcacggc aggccgtccc gcacgtccgg
     1141 gcggtggatt tcgtactggt gtttgccagc ggagtactgt tcggcgtgtg cctgttgaga
     1201 ttgatccagc tggttaggga agggcggttc tcctatgtgg cgcccccatc atccggagca
     1261 caagacattg ctgccctagc cgggcagggt gtgattcctc aggaccctga ctacgaggcg
     1321 cgcgtacgcg agagcttccg tcgccagagc catatggcca cgctcggggc ggagatcgtc
     1381 ttcattgccc caggcgaagt gcacctggcg ttccc
//
LOCUS       DASRPQ010001230         1268 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2040356, whole genome shotgun sequence.
ACCESSION   DASRPQ010001230 DASRPQ010000000
VERSION     DASRPQ010001230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1268
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2040356"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            339..743
                     /locus_tag="VFD73_14100"
     CDS             339..743
                     /locus_tag="VFD73_14100"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HZI75129.1"
                     /translation="MVLAEDATAASQGDPILSGALDLPAADEFLQHAARVLDDRIERL
                     VLDLAGVTFLDCAGVRALATATCFAPSGCPVIIRSLSSPARRIITVLGPDDIENLRRL
                     TAGPEHRDGLPDGVASEQERAPLTWADLELNA"
     gene            785..1042
                     /locus_tag="VFD73_14105"
     CDS             785..1042
                     /locus_tag="VFD73_14105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75130.1"
                     /translation="MHPHRYRICIRDGPSTAICEASGGFTIGFDGAYTTLVADLDQAA
                     LHGALLRIQALDLDLIELTRRPEDAGLTGDGGRVDRLLPGL"
     gene            1086..>1268
                     /locus_tag="VFD73_14110"
     CDS             1086..>1268
                     /locus_tag="VFD73_14110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75131.1"
                     /translation="MKDVTQMGGVRNSAAHGEFDELDRARAGLMEQQVNYFLGRLTGL
                     LVTLVERDDLVVATESA"
BASE COUNT          246 a          415 c          413 g          194 t
ORIGIN      
        1 cccgtggcaa caaattcgtc ccgaacagag cctgcagcag cgcaagaggc ctgctaaccg
       61 gcgttcagcc aggacacgta gctagatgcg gcgacagctg ccaatctgag cgcacctgcg
      121 tgcggcctgc cgctcccata ctgctcccaa aatgggacac gaggcgtcta ggagttatcc
      181 ggaggcttgc accgtagcta ccaggcaaca cacaggctag ggcaggggtt ctgcaggcca
      241 agtaatctgg ccatcggcag accgggcaac gcgcggctat gcctgctcca gcgcgcgtag
      301 gtcggccgcg aggttgtcag cggagtccag ggtgtcgggt ggtcctcgcc gaggacgcga
      361 cggcggcgag ccagggtgac ccgatcctga gcggcgcgct cgacctcccg gccgctgacg
      421 agttcctgca acatgcggcc cgggtcctcg atgaccggat cgagcggctg gtcctggacc
      481 tggccggggt gacgttcctg gactgcgccg gagtacgggc gctggcgacc gccacctgct
      541 ttgcacccag cggctgcccg gtcatcatcc gctcgctcag ttcaccagcg cgccggatca
      601 tcacggtcct gggccctgat gacatagaga acctccgcag actcaccgcg ggcccggaac
      661 accgggacgg actcccggat ggcgtggcca gtgagcagga acgtgccccg ctgacatggg
      721 ccgacctgga acttaacgcg taagcgcccg tctggacctg ccgaaagcac gaagggaggc
      781 cagcgtgcac ccccaccgct accggatttg catcagggac ggcccgagca cagccatctg
      841 cgaggcgtcc gggggattca cgatcggctt cgacggcgcg tacacgacgc tcgtcgccga
      901 tcttgatcag gccgctctac acggagcgct gcttcggatc caggcacttg atctcgacct
      961 catcgagctc acaagaagac cagaagacgc aggcttgaca ggggacggcg ggcgcgtgga
     1021 caggctcctg ccaggactgt gacgccccta ctgccaccag cactgggctg ctgtcgaaac
     1081 aggacgtgaa agacgtgacc cagatgggtg gcgtacgcaa ctccgcagcc cacggcgaat
     1141 tcgatgagct ggaccgagca cgagcagggc tgatggagca gcaggtgaac tactttctcg
     1201 gccgactgac cgggctgctc gtaaccctcg tagaacgaga tgatctcgtg gttgccactg
     1261 aatccgca
//
LOCUS       DASRPQ010001231         3836 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2335582, whole genome shotgun sequence.
ACCESSION   DASRPQ010001231 DASRPQ010000000
VERSION     DASRPQ010001231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3836
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2335582"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..712
                     /locus_tag="VFD73_14115"
     CDS             <1..712
                     /locus_tag="VFD73_14115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75132.1"
                     /translation="EVNIRRNVNARLTVETLLLRWAMLDRMVDLEEVIKAGQGPGGGA
                     GQASAGQRESQEVAGQRSGERGRKESTPRNPATQGATPDAQPSTPGASAPLPPGTTEP
                     PATAKLAPSIEAIRAGWPAIVVAARIQSRFLGELLASVDPAELTLPWLTVVMREPNQL
                     FAERLEQEAPKVEEILSRSLGQAVRLKITAPKQDAPPSGTRRISEASIKADRLREFRS
                     KDPTLDTAADALDLEIVD"
     gene            753..1061
                     /locus_tag="VFD73_14120"
     CDS             753..1061
                     /locus_tag="VFD73_14120"
                     /inference="COORDINATES: protein motif:HMM:TIGR00103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HZI75133.1"
                     /translation="MADLQQLFQLGQQMQGRLQQLQTELASRTIEASAGGGMVKVISD
                     GRGTVRGVWIDPTIFDAHDADFLSDLVLTALAEAQRRAAEMLQSEMRKVPQLPFPSPF
                     "
     gene            1066..1656
                     /gene="recR"
                     /locus_tag="VFD73_14125"
     CDS             1066..1656
                     /gene="recR"
                     /locus_tag="VFD73_14125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HZI75134.1"
                     /translation="MSAIEELITELAKLPGIGRKTAQRLTFHLLQQPPEQVGRLASVL
                     ASVTERVHPCQECGNLTEDQPCAICGDPRRDPGLVCVVEEPSTVSVVDRSTDFRGHYH
                     VLGGHLSPLDGIGPESLRLDRLVQRVQTGAVREVILATNPSMEGEVTATYIQQLLAGM
                     GVRVTRLARGLPVGGDLEYIDGVTLAHALVARQDVG"
     gene            1656..1925
                     /locus_tag="VFD73_14130"
     CDS             1656..1925
                     /locus_tag="VFD73_14130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75135.1"
                     /translation="MRARGWVFGGAVALGLAGGWLLAQQRLTYHRRDLFSPRPLRRLA
                     ALGFLAGQNQIETIRLLRDYLAWERQPMLRRRAEAIVRRMEATLV"
     gene            1936..2427
                     /locus_tag="VFD73_14135"
     CDS             1936..2427
                     /locus_tag="VFD73_14135"
                     /inference="COORDINATES: protein motif:HMM:NF015232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HZI75136.1"
                     /translation="MSGASSWSFREEDARRIQSILSSFLGESNARTALIVDRTGQMVS
                     TAGEQPAFDATAFASLTAADFSANDQLARMLGESEFGALFHQGERESMYLADIARRVI
                     LVVLFDNRTTLGLVKLRVKTAVVQLNQVFTDMFNRDGTSAPGVESEFLGEAEDEIDKL
                     FGS"
     gene            2439..3113
                     /locus_tag="VFD73_14140"
     CDS             2439..3113
                     /locus_tag="VFD73_14140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase domain-containing protein"
                     /protein_id="HZI75137.1"
                     /translation="MSMINYASREINCKLVYYGPGLGGKTTNLEHVYNKVAPASRGKM
                     ISLATETERTLFFDFLPVDLGTIRGFKVKFHLYTVPGQVYYNASRKLILKGVDGVVFV
                     ADSQIERMDANIEAMQNLYENMQQHGYDVTKIPFAIQYNKRDLPNAAPIGELQAALNP
                     GWPVTEASKQRNTPDPYHDSEFLVRQEDGQWIERAPYFEAVALTGEGVFDTLKAISKT
                     VVKTLG"
     gene            3122..3763
                     /gene="pgsA"
                     /locus_tag="VFD73_14145"
     CDS             3122..3763
                     /gene="pgsA"
                     /locus_tag="VFD73_14145"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HZI75138.1"
                     /translation="MWTLPNIITLVRICFTPVIALLPFIEGYWPKLIAFIIFVIAAIS
                     DIYDGHLARSRNEVTDLGKLLDPIADKLLLFATLIPIYWISRQRHDLYDIPIWGSIPL
                     WVCLLLIGRELAMTAFRWWASRRGVVIPAAGAGKLKTTIQNIFVGAVILWFAFRDARK
                     PMGWEHNQYAQYWNEFHGGFVAVTLACAALLTVYSFVLYLYRNRALFSDRARS"
BASE COUNT          724 a         1200 c         1213 g          699 t
ORIGIN      
        1 cgaggtcaac attcggcgaa atgtgaacgc ccggttgacc gtggagacgc tgctgctccg
       61 ttgggcaatg ctggaccgga tggtcgatct ggaagaagtg atcaaagcag ggcaggggcc
      121 cggcggcgga gccggacaag cctcggcggg acagcgggaa agccaagagg tggcagggca
      181 gagaagcggc gaaaggggcc gcaaggaaag caccccccgt aatcccgcca ctcagggggc
      241 tacccccgac gcacagccga gtaccccagg tgcgagtgcc ccgctgcctc ccggtaccac
      301 ggagccgcct gctaccgcaa agctggcccc ctctatcgag gccatccgtg cagggtggcc
      361 tgcaatcgtg gtcgccgccc ggatccagag ccgtttcctg ggcgagctgc tggcctcggt
      421 ggacccggcc gagctgacct tgccctggct gaccgtcgtc atgcgggaac cgaaccagct
      481 ctttgccgaa cggctcgagc aggaggcccc caaggtcgag gagattctga gccgaagcct
      541 gggccaggcg gtgcggctca agattaccgc ccccaagcag gacgctcccc cctccgggac
      601 ccggcggatc tccgaagcca gcatcaaagc cgatcgacta cgggaattcc gctccaagga
      661 ccccacgctc gacaccgcag cggatgcgtt agatttagag atcgtggatt gacctccgac
      721 tctttactac tatggcagga ctacccgaag gcatggcaga tctccagcaa ctctttcagc
      781 tcggccagca gatgcagggc cggttgcagc agctccagac cgagctggcc agccggacca
      841 tcgaggcctc ggccggcggc ggcatggtca aggtcatttc ggatggtcga ggaacggtcc
      901 ggggcgtctg gatcgacccc acgatcttcg atgcccacga cgccgacttc ctcagcgatc
      961 tggtgttgac ggcactggcc gaggcccagc gacgcgcggc cgaaatgttg cagtccgaga
     1021 tgcgaaaggt gccgcagctc cccttcccat cgcctttttg acccggtgag cgcgatcgaa
     1081 gagctgatca ccgagctcgc aaagctcccc gggatcggcc gtaagacggc gcagcggctc
     1141 acctttcacc ttttacagca acctccggag caggtcggtc ggctcgcctc cgtgctggcg
     1201 tccgtgaccg agcgggtgca cccctgccag gagtgcggca atttgacaga ggaccagccc
     1261 tgcgccatct gtggcgatcc tcggcgggac ccagggctgg tctgcgtggt tgaggagccg
     1321 tccacggtca gcgtggtaga tcgctccact gatttccggg gacactatca cgtgctgggg
     1381 gggcacctgt cccccctcga tggcattgga cctgaatcgc tgcggctgga tcggttggtg
     1441 caacgcgtgc agactggggc cgttcgggag gtcattctgg caacgaatcc atccatggaa
     1501 ggcgaagtga ctgcgacata catccagcag ctgctcgccg gaatgggcgt gcgcgtcact
     1561 cgcctggccc gcggcctgcc cgtgggtggc gatctcgagt acatcgacgg cgtgacgctg
     1621 gcgcacgcgc tggtggcgcg gcaggacgtg ggctgatgcg cgcacgcggg tgggtgtttg
     1681 gcggtgctgt ggcgctgggc ctggcgggcg ggtggctgct tgctcagcag cggctcacct
     1741 atcaccggcg cgatctcttc agcccccggc ccctccgtcg gctggcggca ctgggcttcc
     1801 tggcgggcca gaatcagatc gaaaccatcc ggctgctgcg cgattatctc gcgtgggaac
     1861 gccagccgat gctgcgccgg cgagccgaag ccattgtccg ccgaatggaa gcgacactcg
     1921 tgtgaggcaa acccgatgag tggtgcgtcc agctggtcgt tccgggagga ggatgctcgc
     1981 cggatccaat ccattctcag cagctttctg ggcgagtcca acgcccgcac ggcgctgatc
     2041 gtggatcgca ccggccagat ggtttccacc gcaggagagc agcctgcgtt cgacgcaacc
     2101 gcattcgcct cgctcaccgc cgccgacttc agcgccaacg atcagctggc gcgaatgctg
     2161 ggcgaatcgg agttcggggc gctgtttcat cagggcgagc gggaatcgat gtacctggcc
     2221 gacattgcgc gcagggtcat tctcgtggtg ctgttcgaca atcgcaccac cctcggactg
     2281 gtgaagctga gggtgaaaac cgcggtggtg cagctcaacc aggtattcac tgacatgttc
     2341 aaccgtgacg gcaccagcgc tcccggcgtg gagtcggagt ttcttggcga ggcagaagac
     2401 gaaatcgaca aactcttcgg gtcctgagga accaccccat gtcgatgatc aactacgcct
     2461 cgcgcgagat caactgcaaa ctggtgtatt acggccctgg gctgggcggg aaaaccacca
     2521 acctggagca cgtctacaac aaggttgcgc ccgcctcccg tgggaagatg atttccctgg
     2581 cgacggaaac cgagcgaacg ctgttctttg atttccttcc cgtcgacctc gggaccatcc
     2641 gcggattcaa ggtcaagttc cacctgtaca ccgtgcccgg tcaggtgtac tacaacgcct
     2701 cccggaagct gatcctcaaa ggggtggatg gcgtggtgtt cgttgcggat agccagatcg
     2761 agcgcatgga cgccaacatc gaggcgatgc agaacctgta tgagaacatg cagcagcatg
     2821 ggtacgatgt caccaagatc cccttcgcga ttcagtacaa caagcgggac cttcccaacg
     2881 ccgctccgat cggagagttg caggcggcgt tgaatccggg atggccggtg accgaggcaa
     2941 gcaagcagcg gaacactccc gacccgtacc acgactctga gttcctggtt cgccaggaag
     3001 atgggcagtg gatcgagcgt gccccctact tcgaagcggt ggccctgacc ggcgagggcg
     3061 tgttcgacac gctgaaggcg atcagcaaga ctgtggtcaa gacattgggg taggcagcac
     3121 catgtggaca ctgccgaaca tcatcacgct ggtgcggatc tgcttcaccc ctgtcattgc
     3181 cctgttgccc ttcatcgaag ggtactggcc caagctgatc gccttcatca ttttcgtcat
     3241 cgcggcaatc agcgacatct acgacggtca cctggcacgg tcacggaacg aggtgaccga
     3301 tctgggcaaa ctcctcgacc caatcgccga caagctgctc ctcttcgcca ccctcattcc
     3361 gatctattgg atttctcgac aacggcacga tctctacgac atccccatct ggggaagcat
     3421 tcctctctgg gtctgcctgc tgctcatcgg acgcgagctc gccatgacgg catttcgctg
     3481 gtgggccagt cgtcgcggtg tggtcattcc tgcagccggg gcagggaaac tgaagaccac
     3541 aatccagaac attttcgtgg gcgccgtgat tctctggttt gcctttcggg atgcccggaa
     3601 accgatgggg tgggagcaca accaatacgc acagtactgg aatgaattcc acggcggctt
     3661 tgtcgccgtc acgctggcct gcgccgcgtt gctgacggtg tattcctttg tgctctatct
     3721 ctaccggaac cgggcgctgt tctctgatag agcgaggagc taggagctga acatcgagct
     3781 cctcaccgtc ggcaccgagc tgctgctcgg aatgaccgtc gataccaatg gcgcgg
//
LOCUS       DASRPQ010001232         1021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_771686, whole genome shotgun sequence.
ACCESSION   DASRPQ010001232 DASRPQ010000000
VERSION     DASRPQ010001232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_771686"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..620)
                     /locus_tag="VFD73_14150"
     CDS             complement(<1..620)
                     /locus_tag="VFD73_14150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75139.1"
                     /translation="MKKPSYVVVSAFACLLVACRSAASQGVLVQDVRLQANLGLLSNV
                     VELRDGRVTFTDTKNKLFHSADLVSGKLDTLGHRVDSTARAAEPGQYKFPGWVAHLRG
                     DTVALVDFSATRTTLWSEAGTPLGVLQLPPVGGNTPVLMYDTLGYGYKVDYQAVLGGG
                     EPGHAVRPDSIPVVRIALKGGAVDTIGHLASPEYGDATFGEQVQQAA"
     gene            complement(646..>1021)
                     /locus_tag="VFD73_14155"
     CDS             complement(646..>1021)
                     /locus_tag="VFD73_14155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75140.1"
                     /translation="RGQSLPDRVLEVTRYDRELFLRKFPPELRATAQELPFAALKPPF
                     EAGLTRSPDQVWLEKSRAPADSSRRYHVVGRNGRLLEEVRLKGQGRILALGSGQALVG
                     EPTSQGVRLLAVRLPADTASTR"
BASE COUNT          204 a          344 c          286 g          187 t
ORIGIN      
        1 gcggcttgct ggacctgctc gccaaaggtt gcgtcgccat actcaggcga tgccaggtgc
       61 ccgatggtgt ccaccgctcc gcccttcagc gcaatccgaa caaccggaat actgtcgggt
      121 cttaccgcgt ggccgggctc gccacctccc agcacggcct gatagtcgac tttgtagcca
      181 tatcccagag tgtcgtacat caggaccggt gtattccccc caaccggagg gagctggaga
      241 acgcccagcg gagtcccggc ctcgctccac agcgtcgtgc gcgttgcgct gaaatcgacc
      301 agcgcgacgg tatctcctcg aaggtgagca acccagccgg gaaacttgta ctgacccggt
      361 tctgcagccc gagcggtaga gtccaccctg tgtcccagcg tatcgagctt gcccgacacc
      421 aagtcggcac tatggaaaag tttgttcttg gtatcggtga acgtcacccg gccgtcgcga
      481 agctcaacca cattgctcaa gagcccgagg ttggcctgca gccggacatc ctgaacaagg
      541 acaccctggc tcgcagccga acgacaggca accagcaaac acgcaaaagc ggacaccacc
      601 acatagctcg gcttcttcat cgattcactc tctttagaaa acacctcaac gagtggatgc
      661 tgtatctgcg ggaaggcgaa ctgccagtaa cctgacgccc tgcgatgtcg gctcgcccac
      721 gagtgcctgg ccagacccga gcgccaggat ccgtccttgt cccttcagcc ggacttcctc
      781 gagcagcctt ccattccgcc ctacgacgtg atagcgccgc gaggagtccg ccggtgcacg
      841 gcttttttcc agccagacct ggtcggggct gcgcgtcagt ccagcttcaa acggcggctt
      901 cagcgccgcg aacggcagtt cctgggcggt tgcccgcaat tcgggcggaa acttccgcag
      961 aaacagttcg cgatcatacc gggtcacttc gagcactcgg tccggcaaag actgtcctcg
     1021 g
//
LOCUS       DASRPQ010001233         2673 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1724235, whole genome shotgun sequence.
ACCESSION   DASRPQ010001233 DASRPQ010000000
VERSION     DASRPQ010001233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2673
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1724235"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..829
                     /locus_tag="VFD73_14160"
     CDS             <1..829
                     /locus_tag="VFD73_14160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75141.1"
                     /translation="VDRYYQAGPLAPLLYPLLVQVVRQLTGISLTASIYPEAGPSAFP
                     WGGPGPEERPVNDRDYDFDVPLPAPPAGANSVSMEVVTRPGHTTGVNEEVSYTGSIAH
                     VRLPYRGADSGIYARTLRFAWNQTPAPASHWTVRLNRIDVTDAPGKWQLWADVSGHWS
                     YLSGLAPALLDTAAGRSVTLPAQPTDVYLGAGQTLRVYVNGYRAECLDDQFGKLFGQS
                     SYVAGLTFVAACGPTDNQDLGGAVLELPASPSPRGNYLVASTDAAGAHHFSVAVTVE"
     gene            complement(833..2434)
                     /locus_tag="VFD73_14165"
     CDS             complement(833..2434)
                     /locus_tag="VFD73_14165"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI75142.1"
                     /translation="MRFGAKVLFEDVTCSFLAGRRYAITGPNGAGKSTLMKILTGDLE
                     PAKGTVTRPKKFGVLRQDQFAFDEFRVIDTVIMGNAPLWKALQERDALYAKPHDQLTD
                     EDGMRLGELEGIVGEEGGYTAESDAAVLLDGLGVETALQERRMGELQGGQKVRVLLAQ
                     ALFGSPPALLLDEPTNHLDLDSVHWLQDYLSNYEGVLIVISHDRHFLNSVCTHVADID
                     YETVITYTGGYDDMVLAKTQVRAGIEAQNAQREKKIAQLKEFIARFSAGTRSSQVTSR
                     KKEVERLQTSELAKSNIQRPYIRFDMKRPSGRHPLEIKGLSKSYDGLKVVNGFTASIS
                     RGEKIALMGRNGAGKTTMLKSLLRSATGFIEDRDRHFDVDGGIVVWGHEVAAGYFAQD
                     HSDSITRGTTAIEWLHGFDPQASQEELRGLLGQMLFSGEDALKPTNALSGGEAARLIF
                     CRLMLQKPNFLVLDEPTNHLDLEAINALNIALQKYEGTVLLVTHDHDLIDEVATRIWH
                     FEGGRIEDFKGPYEEYAAYAQQKAS"
BASE COUNT          448 a          849 c          846 g          530 t
ORIGIN      
        1 cgtggaccgc tactaccagg caggcccgct ggcgccgctg ctgtacccgc ttctggtgca
       61 ggtggtccgc cagcttacgg ggatctcgct caccgccagc atctatccgg aggccggtcc
      121 gagcgcgttt ccatggggtg gtcccggacc ggaagagcgg ccggtcaacg atcgcgacta
      181 cgatttcgac gtgccccttc cggcgccccc ggccggcgca aactcggtat cgatggaggt
      241 ggttaccagg cccgggcaca ccacaggggt caatgaagag gtgagttata cggggtcgat
      301 cgcgcatgtt cgcctgccct accggggggc ggacagcgga atctatgccc gaacgctccg
      361 ctttgcgtgg aaccaaacgc ccgccccggc gagccattgg accgtgcggc tgaaccgaat
      421 cgacgttacg gacgcccccg gcaagtggca gttgtgggcg gatgtgagcg gccactggag
      481 ctacctttcc ggcctcgctc cggccctgct cgacacagcg gcgggccgca gtgtcacgct
      541 gcctgcccag ccgaccgacg tttacctcgg cgccggtcag acgcttcgcg tttacgtcaa
      601 cggatatcgg gccgaatgcc tggacgatca gttcggcaaa ctgttcggcc aaagctccta
      661 cgtcgccggc ctgacgtttg tagccgcgtg cggtcccacc gacaaccagg atctcggagg
      721 cgcagtgctg gaactgcccg catcgccgtc acccagaggg aattacctgg tggcctcgac
      781 ggacgctgcc ggcgcgcatc acttttcggt ggccgtcacc gtcgagtagc agctaggacg
      841 ctttctgctg cgcgtaggcc gcgtactctt catatggccc cttgaagtct tcgatccggc
      901 ctccctcgaa atgccagatc cgcgtggcca cttcgtcgat caggtcgtga tcgtgggtca
      961 ccagcaacac ggtcccttca tacttctgca aggcgatatt cagcgcgttg atcgcttcca
     1021 ggtccaggtg gttggtcggc tcgtcgagca ccaggaaatt gggtttctgg agcatcaggc
     1081 ggcagaaaat aaggcgggcc gcctcgccgc cggaaagggc gttggtcggt ttcagggcat
     1141 cttcgccgct gaacagcatc tgccccagca gtccgcgcaa ttcttcctgg gatgcctgcg
     1201 ggtcgaaccc gtgcagccat tcgatcgccg tggttcctcg tgtgatggaa tcggaatggt
     1261 cctgggcaaa gtacccggcc gccacctcgt ggccccatac gacaatcccg ccatccacgt
     1321 cgaaatggcg gtcgcggtct tcgataaacc cagtcgcgct gcgcaggagt gatttcagca
     1381 tggtggtctt gccggcgcca ttccgcccca tcagggcgat cttctcgccc cgcgagatgc
     1441 tggcagtgaa tccgttgacc accttgaggc cgtcgtagct cttggagagc cccttgatct
     1501 ccagcgggtg ccggccggag ggccgcttca tatcgaaacg aatatagggc cgctggatgt
     1561 tggatttcgc cagctccgag gtctgcagcc gctccacttc ctttttgcgc gaggtcacct
     1621 ggctggaccg tgttcccgcc gagaatcgcg caatgaactc cttcagctgc gcgatcttct
     1681 tctcgcgctg ggcgttctgg gcctcgatcc cggcgcggac ctgcgtcttg gcaagcacca
     1741 tgtcgtcgta gccgccagtg taagtgatca ctgtttcgta gtcgatgtcg gccacgtgag
     1801 tgcagacgct gttcaggaag tggcggtcgt gggaaatcac gatcagcacg ccttcgtagt
     1861 tggagaggta gtcctgcagc cagtggaccg aatccaggtc gaggtggttg gtgggctcgt
     1921 cgagcagcag cgcgggaggg ctgccgaaaa gcgcctgtgc cagcagcacc cggacctttt
     1981 gacctccctg cagctcgccc atgcggcgct cctgaagagc agtctccacg cccagtccgt
     2041 cgagcagtac ggcggcgtcg gactcggcag tgtacccgcc ctcttcgccg acgatgcctt
     2101 cgagttcgcc cagccgcatc ccgtcctcgt cggtgagctg gtcgtgcggc ttcgcataga
     2161 gggcatcgcg ttcctggagc gccttccaga gcggcgcatt gcccatgatg acggtgtcga
     2221 tcacgcggaa ttcgtcgaac gcgaactggt cctggcgcag cacgccgaac ttcttcgggc
     2281 gggtgacggt cccttttgcg ggctccaggt cgccggtgag gatcttcatc agcgtggact
     2341 tgccggcccc gttgggaccg gtaatcgcat atcgccgtcc cgccaggaat gagcaggtga
     2401 cgtcttcgaa cagtactttg gcgccgaagc gcatggagat gtcttggatg gaaagcaagg
     2461 gtttctacca gtatacccca cgcccgcgtt gtgggagatg atgaacagga ggcgggccaa
     2521 ccgctccaat ggagcggcgg aagcacgcac cagccacgtc gccgggggca ttcgtggctt
     2581 cccgttcact tcggacccct gcggctggta tagaataaac ccaatagcta tgggatgctt
     2641 gccttccgga gttcaggcgc cgagtgtgcg ccg
//
LOCUS       DASRPQ010001234         1237 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1404492, whole genome shotgun sequence.
ACCESSION   DASRPQ010001234 DASRPQ010000000
VERSION     DASRPQ010001234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1237
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1404492"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1237
                     /locus_tag="VFD73_14170"
     CDS             <1..>1237
                     /locus_tag="VFD73_14170"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HZI75143.1"
                     /translation="KVNPQGRVKVLDFGLAKAAWGDSQAPVSNAAPVLGTETLVGQIM
                     GTPPYMSPEQAQGRPVDQRTDTWSFGCLLYELLTGKRAFPGEGVSDTIAAVLEREPDW
                     SALPAKTPTRIRRLLRRCLEKDAGRRLPAIRAAREEIDKVQRGLSRWQAAAMAAAAVT
                     ILAAGATVYLRAPVHPASRSEWVQLTNFPDSVSQPALSADGRMLAFVRSPETFAVPGE
                     IYVKTLPNGEPVQLTSDNLSKMSPAFSPDGTRIAYTVVTQQDYVWDTWVAPSARGAPR
                     PWLTNASGLIWLDKQQLLFSVVEPDLHMGVVTADEGRRARRWVYMPASSRGMAHRSYP
                     SPDRKWVLLVEMERANWLPCRLVPMDGSSAGHPVGPPEGACTFAAWSPDGKWMYLSSS
                     AGGSYHIWRQRFPAGQPEPL"
BASE COUNT          219 a          384 c          413 g          221 t
ORIGIN      
        1 aaggtcaacc ctcaaggcag agtcaaggtc ctcgatttcg gcctggcgaa agcagcctgg
       61 ggcgacagcc aggctccagt ctccaatgcg gcgccggtgc tgggcacgga gacgctggtg
      121 gggcagatca tgggcacgcc gccctatatg agcccggagc aggcgcaggg gaggccggtc
      181 gatcagcgaa ccgacacctg gtcgtttggt tgcctgctgt atgaattact cacgggcaag
      241 cgggcctttc ccggagaggg cgtgtccgac acgattgccg cggtgctgga aagggaaccg
      301 gattggagcg cgctcccggc gaagactccg accaggattc gtagactgtt gcggcgctgt
      361 ctggaaaagg atgccgggcg ccgcctgccg gccatacggg ctgcgcgcga ggagatcgac
      421 aaggtacagc gggggctcag ccgctggcaa gccgccgcga tggccgccgc tgctgtcacg
      481 attctggccg ccggcgccac ggtctatttg cgcgctcccg tgcacccagc ctcgcgttcg
      541 gaatgggtcc aactcacgaa cttcccggac tccgtgagtc aacctgctct gtctgcggac
      601 ggacgaatgc tggcgttcgt tcgcagcccc gagacgtttg ccgtgccggg agaaatctac
      661 gtcaaaacgc tccccaacgg cgaaccggtt cagctcacga gcgacaactt gtcaaaaatg
      721 agtccggcgt tttcacccga cggcacacgg atcgcctaca ccgtcgtcac ccagcaggac
      781 tacgtgtggg acacctgggt ggcgccatcg gccaggggag caccacgccc gtggctcacg
      841 aatgcatccg gtttgatttg gctcgacaaa cagcaactct tgttctccgt tgtcgagccg
      901 gatctccaca tgggtgttgt gactgcggat gagggccgcc gcgctcgacg ttgggtatat
      961 atgccggcga gctcccgcgg aatggcacac cgttcgtatc cctcgcccga tcgcaaatgg
     1021 gtgttgctgg tggaaatgga gcgggccaat tggctgcctt gccgcttggt tccgatggac
     1081 ggaagttcgg cgggccatcc tgtggggccg ccggagggcg cctgcacctt cgccgcgtgg
     1141 tcgcccgacg gcaaatggat gtaccttagc tcgagtgcgg gaggaagcta ccacatctgg
     1201 cggcagcgct ttccggccgg ccagccggag ccgctta
//
LOCUS       DASRPQ010001235         3149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1404648, whole genome shotgun sequence.
ACCESSION   DASRPQ010001235 DASRPQ010000000
VERSION     DASRPQ010001235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3149
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1404648"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1191)
                     /locus_tag="VFD73_14175"
     CDS             complement(<1..1191)
                     /locus_tag="VFD73_14175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75144.1"
                     /translation="MIGMAMAPSSGLTPELLSAVTASPSPESMPTPELLRELAQRLAA
                     QGIPYCQWKGHWSAHRWKTGLGDVDLLIDRGALADCRRLMGDLGFKLALPSGARQIPG
                     VECYVGHDPGVPRLLQVRVYYRLMMGDYWKPVFRIPIEDAVVRSAVPGELFQVPAPTH
                     QYLIFLLRVMLRQLGRPLLSLQKRWRSGIQPPLSSLAAAADDQELAAFLRQHLPSIDF
                     SLFQRCVRALQGQSSPVECAVLPWLLARKLRAHARPPSAAAVASAAIETLLPEELAAR
                     LVQRRMHLSGGGTVVALVGGRGVGKSTCAREVAHWLRPVIPTMRAHLGNPPRALLTWV
                     THGLLWAEQTVTAAFNRQPSPTGVLNLLRYVCTARDRHRLNLKAHRFAAAGGVAVCDH
                     SPIRE"
     gene            complement(1188..1904)
                     /locus_tag="VFD73_14180"
     CDS             complement(1188..1904)
                     /locus_tag="VFD73_14180"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZI75145.1"
                     /translation="MNWTSLPANTTAGQGSGTFHPASAKGEAGSEPAAQFLIRERQGR
                     LLDLLHRHGCMPLTGKRILDVGCGTGTWLRDLIGWGADPANLFGVEWLPASAARARRL
                     CPEPVTIACSNAATLEFPPESFDIVLQATVFSSVLDLDMRRAIASEMLRVVRPTGLIL
                     WYDVIVENPWNSCVHPLRKSEIRQLFPGCSLELLRVGLAPLFAKLAAPRSWRVSSILS
                     ALPPMCTHCLGAIRPPMRQP"
     gene            complement(1901..>3149)
                     /locus_tag="VFD73_14185"
     CDS             complement(1901..>3149)
                     /locus_tag="VFD73_14185"
                     /inference="COORDINATES: protein motif:HMM:NF014740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HZI75146.1"
                     /translation="DLQNRVILVTGAAGSIGSELARQIAPFNPAKLILLDQSESDLYF
                     IHLELQELYPALELVPVICDVTNQSRLAQVYAQHHPEYVIHAAAYKHVSLMEKNVLEA
                     VRNNVLGTLLVATTAVRYGVDKLVLVSTDKAIRPASVMGATKRIAERIIFGLPNLHRS
                     GTDFRAVRFGNVLESKGSVVPLFQRQLAAGGPLTVTHPQVSRYFMSTPEATQLVLLAG
                     SLPETAGSIAMLDMGEPVRILELAEKLIRLSGQVPGRDVEIVFTGLRPGEKLSEEHTS
                     DCETTIPTTAQKIRITQSMESTGPELMQKLSRLFAFLDAGDHEGLLATICELVPECVS
                     PLKESATARPAMTVSTAHAMETWGGLANPDEIQWRGRRRVPPRPSHPPELKVIDRRDG
                     PPCRRKTPRVGGRRKSDRAGACP"
BASE COUNT          603 a          977 c         1032 g          537 t
ORIGIN      
        1 ttcccgaatc ggggagtggt cacagacagc aactcctccc gcagcagcga agcgatgggc
       61 cttcaggttg aggcgatgcc ggtcccgtgc ggtacagaca tatcgcagca ggttcaacac
      121 ccctgtgggt gagggctgac ggttgaatgc tgccgtcacc gtctgctccg cccacagtaa
      181 tccgtgggtg acccatgtga gcagcgcacg tggcggattc cccaggtggg cacgcatcgt
      241 cgggatgacc ggtcggagcc aatgcgcgac ctcccgagcg caggtagact ttccaacgcc
      301 tcgacctccc accaatgcca ccactgtccc cccgcctgaa aggtgcatcc gtcgttgtac
      361 cagtcgggcc gcaagctcct cgggcagcaa cgtttcgatg gcagcggagg cgactgccgc
      421 ggctgaaggc ggacgggcgt gggcgcgaag ctttcgagcc agcagccaag ggagcaccgc
      481 gcactcgacc ggactggatt gtccttggag tgctcggaca cagcgctgaa agagtgagaa
      541 gtcgatcgag ggcagatgct gccgcagaaa tgccgcgagc tcctgatcat ctgcagcagc
      601 tgccagtgag ctcagcggcg gctggatgcc gctccgccag cgcttctgca gagagagcag
      661 tggccttcca agctgccgaa gcatcactcg gaggaggaaa atcagatact ggtgagttgg
      721 tgccgggacc tgaaagagct cgcccggcac tgccgatcgg acaactgcat cctcgatcgg
      781 tattcggaac accggcttcc agtagtcccc catcatcagt ctgtagtaca ctcgaacttg
      841 caggagccgc ggcacgcccg gatcgtgtcc cacatagcac tcgactccag ggatctgccg
      901 tgcgccgctc ggcagagcca gcttgaatcc gaggtcgccc atgagccggc ggcagtccgc
      961 cagggcgccg cgatcgatca gcagatcgac gtcgcccagt ccagtcttcc agcgatgggc
     1021 gctccagtgt cccttccact ggcaatacgg gattccctga gcggccaacc gctgggccaa
     1081 ttcccggagc agctccggcg tcggcatgct ctccggcgat ggagacgctg tgaccgcgct
     1141 cagcaactcg ggtgtgagcc cggaggaggg agccatcgcc ataccgatca tggctggcgc
     1201 atgggcggtc gaatggcgcc caggcaatgg gtgcacatcg ggggcaacgc ggagaggatc
     1261 gaggacactc gccacgacct cggtgcagca agcttggcga acagaggcgc caggccaacg
     1321 cgcaggagct ccagggaaca gccggggaac agctggcgga tctccgactt ccggagtggg
     1381 tgcacgcagg agttccaggg attctcgacg atgacgtcat accagaggat caggccggtc
     1441 ggccgcacca ctcgcaacat ctctgatgca attgcccgtc gcatgtcgag atccaagacc
     1501 gaggagaaga ccgtcgcctg cagcacgatg tcgaacgatt ccggaggaaa ctccagggtg
     1561 gcggcattgg agcatgcgat ggtgacgggt tcggggcaga gccgccgtgc ccgcgccgcc
     1621 gaagcaggga gccactcgac gccgaacaga ttggccggat cggcgcccca gccgatcagg
     1681 tcgcgcagcc aggtgccggt tccgcagccg acatccagaa tgcgcttccc cgtcagcggc
     1741 atgcacccat gccgatgcag caggtcgagt agccgacctt ggcgctcccg aatcaggaat
     1801 tgagcagctg gctccgaccc ggcttcgccc ttggccgagg cgggatggaa ggttccagaa
     1861 ccctggccgg ccgttgtgtt cgcgggcagt gacgtccagt tcacgggcag gctcccgcgc
     1921 ggtcgctctt gcgacggccc ccgacgcgag gggtcttccg gcggcagggg ggtccgtccc
     1981 gccgatcgat caccttcagc tctggtggat gagatggacg aggcgggact cgcctccgtc
     2041 cccgccactg aatttcatcc gggttcgcga gacctcccca ggtctccatc gcatgcgcgg
     2101 tagacaccgt catggccggg cgggccgttg cagattcctt cagcggcgag acgcattcag
     2161 gaaccagttc gcagatggtc gccaacaaac cctcgtggtc gcccgcgtcc aggaaggcaa
     2221 acagcctgct gagcttctgc atcaactccg ggccggtgct ctccatcgac tgagtgattc
     2281 tgatcttctg ggcagtggta gggatcgtgg tctcgcaatc cgaggtgtgc tcctcggaca
     2341 acttttctcc cggcctgagg ccggtgaaga cgatctcaac atccctgccg ggcacctggc
     2401 cggagagccg gatcagcttc tccgcgagct ccagaattcg aaccggctct cccatatcga
     2461 gcatggcgat tgatccggcc gtctccggaa gggagccagc caggagaacc agttgggtgg
     2521 cttcgggagt gctcatgaag tagcggctca cctgcgggtg ggtaacggtg agcgggccgc
     2581 cagcggcgag ctgccgctga aacagtggaa caacgcttcc tttggattcg aggacattgc
     2641 cgaatctgac ggcacggaaa tcggtgccgg agcgatggag attgggaagc ccgaatatga
     2701 tccgttcggc gatacgcttg gttgctccca tcacgctggc cggccggatg gccttatcgg
     2761 tggagaccag caccagttta tcgacgccat agcgcaccgc ggtggtcgcg acgaggagtg
     2821 tgccgaggac gttattgcgg acggcctcga ggacgttctt ctccatcagc gaaacgtgct
     2881 tgtacgccgc ggcatggatg acgtactccg ggtgatgctg cgcgtatacc tgggccagcc
     2941 ggctctggtt ggtgacgtcg caaatcacgg ggaccagctc cagagccgga tagagctctt
     3001 gaagctcgag atggatgaag tagagatcgc tttccgattg atccaacaga atcagcttgg
     3061 cagggttgaa cggcgcgatc tggcgggcca gctcggaccc aatcgagccg gcagctccag
     3121 tcaccagaat gacgcggttc tggaggtcg
//
LOCUS       DASRPQ010001236         1121 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4542338, whole genome shotgun sequence.
ACCESSION   DASRPQ010001236 DASRPQ010000000
VERSION     DASRPQ010001236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4542338"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..771
                     /locus_tag="VFD73_14190"
     CDS             <1..771
                     /locus_tag="VFD73_14190"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FmdB family zinc ribbon protein"
                     /protein_id="HZI75147.1"
                     /translation="NHLAYFLLTNLLLDSLRAAAPSRIVNVSSGAHSGARLDFDDLQS
                     ERKYRAVGVYSRTKLANILFTYELARRLQGTGVTANCLHPGVVGTKLLADYMGVPVAG
                     GALARTFGSSPEEGAATGIYLASAPELENVSGKYFEGRRERRSSRESYDEAAARRLWD
                     VSERLTGLSTLPMILLRPSSCMPIYDYRCATCSHRFEQLVRGSQAVTCPQCSGRNLER
                     LISLPARPSSGGRQPDYSRLGPPSGGGCCGGSCQSHSH"
     gene            750..>1121
                     /locus_tag="VFD73_14195"
     CDS             750..>1121
                     /locus_tag="VFD73_14195"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HZI75148.1"
                     /translation="MPIAFALADRLARLREHQPQDPAVECDPGGQWAAVAIIVAPAPD
                     AILLIRRSERSGDPWSGHMALPGGRRDTEDRELLDTAIRETREEVGIHLGRSDLVGIL
                     QPVVPRTRVLPPIAIQPFVFHL"
BASE COUNT          198 a          363 c          334 g          226 t
ORIGIN      
        1 aatcacctcg cctatttcct gctgacgaac ctcctgctcg attccctccg tgccgccgcg
       61 ccatctcgca tcgtgaacgt ctcctcggga gcccacagcg gagcgaggct ggatttcgac
      121 gacctccaaa gcgagcgcaa gtaccgtgcg gttggcgtct acagccggac caagctggcc
      181 aatattctct ttacctacga actggcccgg cgactccagg gcactggtgt aaccgcgaac
      241 tgtctccatc ccggtgtggt cggtaccaag ctgctggcag actatatggg agtgccggtc
      301 gccggcggcg cgcttgctcg caccttcggc agcagtccgg aagaaggcgc cgccaccggc
      361 atttacctgg cgagcgctcc ggaactggaa aacgtgagcg ggaaatactt cgagggcagg
      421 cgggagaggc ggtcgtcgcg tgaatcctac gatgaagcgg ccgcgcgacg gctatgggac
      481 gtcagcgaac ggctgaccgg cttgtccact ttacccatga tcctcctacg gccaagctcc
      541 tgcatgccca tttacgatta ccgctgcgcc acctgtagtc atcgctttga gcaactggta
      601 cgcgggtctc aggcggtgac ctgcccgcag tgctcgggac gcaatctcga gcgtctgata
      661 tcgcttcctg cccgtccctc ctctggtggt cggcaacccg actacagtcg cttgggtccg
      721 ccgtcaggcg gaggctgctg tggaggtagt tgccaatcgc attcgcatta gccgatcgac
      781 tcgctcgcct gcgcgagcac cagccccagg accccgcagt tgaatgcgat cccggcgggc
      841 agtgggccgc tgtagccatc atcgttgctc cagcgcctga tgccattctt ctgattcggc
      901 gatccgaacg ttccggtgac ccatggtcag ggcatatggc actaccgggc gggcgccggg
      961 ataccgaaga tcgcgagctc ctggatacgg caatccggga aaccagagag gaagtcggaa
     1021 ttcacctggg tcgaagcgat ctcgttggaa ttctgcagcc tgtggtgcct cggacgcgtg
     1081 tccttccgcc cattgccatc caaccgtttg tctttcatct c
//
LOCUS       DASRPQ010001237         1469 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_457150, whole genome shotgun sequence.
ACCESSION   DASRPQ010001237 DASRPQ010000000
VERSION     DASRPQ010001237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1469
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_457150"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(151..1194)
                     /locus_tag="VFD73_14200"
     CDS             complement(151..1194)
                     /locus_tag="VFD73_14200"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HZI75149.1"
                     /translation="MLHRFIPSHFHNPVGLARRLLRTGDPAALFAMESALLGLIATPL
                     DMLLQVPEQRKYRAASSPVQPLLFICGAPRTGTTLVEQVLIRYLPFAFINNLTSVFPR
                     APLTANRIFRPRPREREGSFHNFYGKTIGFAAPNDALHLWDRWLGSDRTKVRTSLTPS
                     EQQDMRRFFGALEQLYSKPILAKNNNLNACASLVADVFERAFFICMNRDPRYLAQSQL
                     RARLDIHGRSDVPYGLALQPDPESASGAVVEDICRQVLYHQQLAREQQERIGPERFWI
                     VDYEAFCRNPSVLVHAVATKVLGQPCPDDARQLSPFTISNSVRIDPAQFHEIETTLER
                     LVSSAPPLYMPAV"
     gene            1186..>1469
                     /locus_tag="VFD73_14205"
     CDS             1186..>1469
                     /locus_tag="VFD73_14205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75150.1"
                     /translation="MKQTPGEAGHASLLGVEDGSGESASDTGLPSEKVWVPAAVRQAG
                     GRGRVVVFWGRLLVALSILAFILSRIDIRSAALRLSPGLLAAVATATGLW"
BASE COUNT          280 a          412 c          496 g          281 t
ORIGIN      
        1 gtttgccatc ctcgctctga actatgtgac cacccagtcg gtcctcaccg ccttcgccct
       61 gagtcccgga ctgaggttgg gagtgctcac cgccaacggc ttggccctgg ctggtttgtt
      121 tggcctgtac tccatggaag cgaaccgatt tcagaccgct ggcatgtaga gcggcggagc
      181 cgacgagacc agacgttcga gggtggtttc aatttcgtgg aattgagcgg gatcgattcg
      241 aaccgagttg gagatcgtga atggagagag ctgccgggca tcatcaggac acggttggcc
      301 gagcaccttg gtggccaccg cgtggaccag gactgaagga ttccggcaga acgcctcgta
      361 gtccacgatc cagaagcgtt cagggccgat tcgctcctgt tgctcgcggg caagctgttg
      421 atggtatagg acctggcggc agatgtcctc gaccaccgca cccgaggcac tctcgggatc
      481 gggttgcaac gcgagcccgt acggcacgtc gcttcggcca tgtatgtcca ggcgggcacg
      541 caattgcgac tgggccaaat accgagggtc gcgattcatg cagatgaaga acgcacgttc
      601 gaacacgtcg gctaccaggc tggcgcaggc gttcaggttg ttgtttttgg ccagaatcgg
      661 cttggagtag agctgctcca gcgctccgaa gaatcggcgc atatcctgct gctcgctcgg
      721 ggtaagggag gttcgcactt tggttcggtc acttccgagc cagcgatccc agagatgcag
      781 cgcatcgtta ggggctgcga agccgatcgt tttgccgtag aagttatgga acgagccctc
      841 ccgctcgcgc gggcgaggac gaaagattcg attggccgtc agaggggcgc gaggaaagac
      901 agacgtcaga ttgttgatga aggcaaacgg cagataccga atcagtacct gctccaccag
      961 cgtggttccg gttcgtggag caccacagat gaaaagcagt ggctgcaccg ggctcgaggc
     1021 agctcgatat tttcgctgct ccgggacctg aagcagcata tccagcggag tggcgatcag
     1081 accgagcagt gccgactcca tcgcgaacag ggcggcggga tccccggtgc gcagcaatcg
     1141 ccgcgcgagg ccgaccggat tgtgaaagtg tgagggaatg aagcggtgaa gcaaacgcct
     1201 ggcgaagcgg gacatgcaag cctgctcggg gtggaggatg gctccggaga gtcggcatcc
     1261 gacaccgggc tgccgagcga aaaggtatgg gttcctgcgg cggtgcgtca agccggaggt
     1321 cggggccgcg tcgtcgtatt ctggggccgg ctgctggtgg cgctctccat cctcgcattc
     1381 attttgagcc ggatcgatat ccgctcggcc gccctgcggc tcagcccggg gctccttgcg
     1441 gcggttgcca cggccactgg gctctggat
//
LOCUS       DASRPQ010001238         1393 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2675961, whole genome shotgun sequence.
ACCESSION   DASRPQ010001238 DASRPQ010000000
VERSION     DASRPQ010001238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1393
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2675961"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..479)
                     /locus_tag="VFD73_14210"
     CDS             complement(<1..479)
                     /locus_tag="VFD73_14210"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI75151.1"
                     /translation="MQDVASEAACPAFGRPVSFAHSKSYLQTPLRQPSRMNLEKLKDT
                     ARKLEQKEDWRKAIEVYLKAIQQAESGAESSPDLSLYNRVGDLYLKINDTAEAVRSYE
                     RAVDLYADQGFFNNAIALCGKILRVNPGRTQTYLKLCQLHARKNVVSEAKRNLIEFL"
     gene            complement(522..>1393)
                     /locus_tag="VFD73_14215"
     CDS             complement(522..>1393)
                     /locus_tag="VFD73_14215"
                     /inference="COORDINATES: protein motif:HMM:NF012447.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aromatic amino acid lyase"
                     /protein_id="HZI75152.1"
                     /translation="AAAMSLEALRGTPAPLDPRIHEARPHAGQIRAAALMRALLQDSA
                     IRESHRENDPRVQDAYSLRCAPQVLGAVADAIAFARQTASIELNASTDNPLVFDNGDV
                     ISGGNFHGQPVAQALDVLALTLTTLQAIAERRIERLVNPDLSQGLPAFLTHDPGLNSG
                     LMMVQIAAASLVAESRSLANPASIQSIPTDANQEDFVPMGMAAGFKTGRILTNAQRVV
                     AAELLCAAQGLEFLKPLTPGRGVAELYTRLRSLEPPVLPLDRDRPPAPDLERLTRAVA
                     QGDFDPGELVEDR"
BASE COUNT          244 a          419 c          457 g          273 t
ORIGIN      
        1 tccaggaact cgatgaggtt acgcttggcc tcactgacga cgttcttgcg ggcgtggagc
       61 tggcagagct tcagataggt ctgcgttcgc ccgggattga cccttaagat ctttccgcac
      121 agggcgatgg cgttgttgaa gaagccctgg tcggcataca ggtccaccgc ccgttcgtag
      181 gagcggactg cctcggcggt gtcgttgatc ttgaggtaca ggtcgccgac ccggttgtag
      241 agtgacaggt cgggactgct ttcggccccg gactcggcct gctggatggc cttcagataa
      301 acttcaatgg cctttcgcca atcctccttc tgttcaagct tccgcgccgt gtctttcagc
      361 ttttccagat tcatgcggct cggctggcga aggggtgttt ggagataaga cttggagtgc
      421 gcgaaagata ccgggcggcc aaaggccggg caagcagctt cagatgccac atcttgcacg
      481 ctatccgaaa gtgcgacaac agactgcgcg tttggggcgg ttcagcggtc ttccaccagc
      541 tcccccgggt cgaagtcgcc ttgggcgacg gcacgggtca gccgttcgag gtcgggagcc
      601 gggggacggt cgcgatccaa ggggaggacc ggcggctcca gtgaccgcag tctggtgtag
      661 agctcggcca caccgcggcc aggcgtaagc ggcttcagga attccagtcc ctgtgccgcg
      721 cagaggagct ccgcggccac cacccgctga gcgttggtca gaatccgacc ggtcttgaat
      781 cccgcggcca tccccatcgg cacgaagtct tcctgattgg cgtcggtggg aatcgactga
      841 atgctggcgg ggttcgcgag agagcgcgac tcggcgacca gtgacgccgc ggcaatttgg
      901 accatcatga gtccggagtt cagaccggga tcgtgggtca ggaaggcggg gagaccctgg
      961 gacagatccg gattcaccag acgttcgatg cgccgctccg cgatagcctg caacgtcgtc
     1021 aacgtcagcg ccagcacgtc gagggcctgg gccactggct gcccgtggaa gtttcctccc
     1081 gagatcacgt caccattgtc gaacaccaac ggattatcgg tcgacgcatt caactcgata
     1141 ctcgcggtct ggcgagcgaa ggcgatggca tcggccacgg caccaagcac ctggggcgcg
     1201 caccggagac tatacgcatc ctgtacgcga ggatcgtttt ctcgatgaga ttctcgtatc
     1261 gcgctgtcct gaagcagggc tcgcatcagt gccgctgccc tgatctggcc ggcgtggggc
     1321 cgtgcctcgt ggatcctggg atccaacggt gccggggttc ctcggagcgc ctccaggctc
     1381 atcgcggctg ccc
//
LOCUS       DASRPQ010001239         2036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2675977, whole genome shotgun sequence.
ACCESSION   DASRPQ010001239 DASRPQ010000000
VERSION     DASRPQ010001239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2036
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2675977"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2036
                     /locus_tag="VFD73_14220"
     CDS             <1..>2036
                     /locus_tag="VFD73_14220"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HZI75153.1"
                     /translation="VARLAIAKRFLAEYAKLDKSVQSAVESAIAKFAEHTHAGLHLEK
                     FQHSRDDRIRTIRVDSFWRGVVLAPEKGDTYCLITVLPHDKANAYATSHRFSVNQALG
                     VLEVRDEEAIQQLQPSLLAVTQPPEKRLFAHVSDADLIRLGVDAQILPLVRLLTSDAH
                     LEALQTVLPEAQYTALYALACGMTGEQAWTEVAQLLPADRPPEQVDPGDLVSAMERTP
                     GEVVFVSSQEDLQRVLAHPFAAWRTFLHPAQRKIAYRVTYAGPAQLTGGAGTGKTVTA
                     LHRAAFLAARAHTPAGAGGPDQMTAPILLTTFTRNLAEALEAQLALLADDPVVRSRID
                     VLNVDRLAYAVVKRARGAPGIADDRDVRARWSQAAADAGLPFTPVFLDHEWEQVILAQ
                     DLRTEQAYLTCLRTGRGRPLTKAQRSQVWQATEQVTSELGAARQSTHLQLANEATHLL
                     RQAPSVRYQHVIVDEAQDLHPAQWRLLRAVVPAGPNDLFIASDPHLRIYDNHVSLTSL
                     GIGVRGRSRRLTMNYRTTQEILAWAVPLLGPDPVTGLDGEVDSLLGYRSPMHGPRPQL
                     HKAAGRDRELAALAERIRGWLANGIEAHAIGVAARSTHVGREARDALRAAGIRSVSLS
                     SQGGKQSVRVGTMHGMKGLEFQAVAVIGVEQGLVPAPAAVTPASDDAVAHAQDL"
BASE COUNT          367 a          693 c          650 g          326 t
ORIGIN      
        1 gtggcgcgcc tggcgatcgc gaaaaggttc ctcgctgaat acgcaaagct ggataaaagc
       61 gtccagagcg cggtcgagtc ggcgatagcc aagttcgcgg agcatacgca cgccgggctg
      121 cacctggaaa agtttcagca cagccgcgat gaccgcatcc gcaccatccg ggtggatagc
      181 ttctggcgtg gcgtcgtgct cgccccagag aagggggaca cgtactgcct gatcacggtg
      241 ttgccgcacg acaaggccaa cgcctacgcc actagccacc gtttcagcgt caaccaggcg
      301 cttggcgtgc ttgaggtccg cgacgaggaa gcgatacagc aattgcagcc ctccctcctg
      361 gcggtcaccc agcccccgga gaagcgactg ttcgcgcacg tcagcgatgc tgacctgatc
      421 cggctcggcg tcgatgcgca gatccttcca ctggtccggc tattgacaag cgacgcgcac
      481 ttggaagcac tccagaccgt gctgcccgag gcgcagtaca cggccttgta cgcactggcc
      541 tgcgggatga ccggcgaaca ggcatggacg gaggtcgccc agctacttcc ggccgacaga
      601 cctccggaac aggtagatcc tggtgacctg gtgtcggcaa tggaacgtac tcccggtgag
      661 gtcgtgttcg tctccagcca ggaagacctg cagcgggtcc tggcacaccc gttcgccgca
      721 tggcgaacgt tcctgcaccc ggctcaacgc aagatcgcct acagggtgac ctatgccggg
      781 ccggcacagc tgactggtgg tgctggtact gggaagaccg tgaccgcgct gcaccgggcc
      841 gccttcctgg cagcccgcgc tcacacgcct gcgggggctg gcggtccgga tcagatgaca
      901 gcgccgattc tgctgaccac cttcacccgg aacctggccg aggccctcga ggcacaactc
      961 gccctgctgg ctgacgaccc cgtcgtccgg agccgcatcg atgtgctgaa cgtcgaccga
     1021 ctcgcgtacg ccgttgtcaa gcgggcccgc ggcgcccccg gcatcgctga cgatcgtgac
     1081 gtgcgggccc ggtggtccca ggcagccgcc gatgccggac tgccgttcac gccagtcttc
     1141 ctcgaccatg agtgggagca ggtcatcttg gcgcaagacc tgcgcaccga acaggcatac
     1201 ctgacgtgcc tgcgcaccgg ccggggacgg ccgctcacca aggcacagcg aagccaggtc
     1261 tggcaagcca ctgagcaggt cacatccgag cttggcgccg cccggcaatc cacgcacctt
     1321 cagcttgcca acgaggccac ccatctgctc cggcaggcgc ccagcgtccg ctaccagcac
     1381 gtgatcgtgg acgaggctca ggatcttcac cctgcgcaat ggcggctgct gcgcgctgtg
     1441 gtgccagctg gtccaaatga cctgttcatc gcctctgacc cgcatctgcg gatctatgac
     1501 aaccacgtct ccctgaccag cctgggcatt ggagtgcggg gccgtagccg tcggctcact
     1561 atgaactacc ggactaccca ggaaatcctg gcctgggccg tgccgctgct cggacctgac
     1621 ccggttaccg gcttggacgg cgaggtggac tcactgcttg gctaccgctc gcctatgcac
     1681 ggaccacgcc cgcagcttca caaagccgcg ggccgtgacc gcgaactggc tgcgctcgcc
     1741 gaacggatcc gtgggtggct ggccaacggc atcgaggccc atgccatcgg ggtagctgcc
     1801 cgatccacgc acgtggggcg tgaagcacga gacgcactca gagccgctgg aatcaggtcg
     1861 gtatcactga gtagccaggg cggcaagcag tcagtccggg ttggcaccat gcacggcatg
     1921 aaggggctcg aattccaggc cgtcgcggtg atcggggtgg aacagggcct ggtcccggcg
     1981 cctgcggcgg tcactcccgc aagcgacgat gccgtcgcac atgcccagga tctgca
//
LOCUS       DASRPQ010001240         4701 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3299869, whole genome shotgun sequence.
ACCESSION   DASRPQ010001240 DASRPQ010000000
VERSION     DASRPQ010001240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4701
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3299869"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2161)
                     /gene="gyrA"
                     /locus_tag="VFD73_14225"
     CDS             complement(<1..2161)
                     /gene="gyrA"
                     /locus_tag="VFD73_14225"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HZI75154.1"
                     /translation="MTAPNSRERILPRLIEEEMQQSFINYSMSVIVSRALPDVRDGLK
                     PVHRRILYAMNELGLVPGRAYKKSATVVGDVLGKYHPHGDGSVYDALVRMVQEFSLRY
                     PLVDGQGNFGSVDGDPAAAYRYTEARLTRVAMAMLEDIDKNTVDFQANFDDRLQEPTV
                     LPSKIPNLLVNGSSGIAVGMATNIPPHNLREIVKGVHLLVDNPEATIAELRKVIKGPD
                     FPTGAYIYGREGIKEAYENGKGRVVMRARAQIEERETSGRSQIVVTEIPYQVNKENLV
                     KSIAELAAEKKIEGITGINDESDKDGMRIVIELKRDVIPNVVLNQLYKHTQMQTTFGV
                     IMLALTNGAPKIMNLKELLQHFIDHRHNVITRRTQFDLDAAQAREHILDGLKIAVDNI
                     DEVIKIIRGSDDTAQADARLRKRFGFSEKQSDAILNMRLAKLTGLEIEKLEAELKEVR
                     ATIKELKSILASKPKRMAILKEEMDEVAGSFGDDRRTEIVADQGEFTVEDLIAEEDMV
                     ITISHSGYIKRIPITTYKRQRRGGRGLTGADLKADDWVEHLFIASTHDYLMFFSNKGQ
                     VYWLKVHEIPQAGRAARGKPVINCIAIRPDEQIAALVPVREFTDDKCLIFATRQGTVK
                     KTVLSAYGNVRTSGICGINIEKGDELIDVQVCDQNSDIVLATKDGMSIRFHQGDVRDM
                     GRATTGVKGIELEKDDEVIGMVVVRRDATLLVVSEKGY"
     gene            2396..3079
                     /locus_tag="VFD73_14230"
     CDS             2396..3079
                     /locus_tag="VFD73_14230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75155.1"
                     /translation="MPTPFRFGRMLLALVLLAVPRLVTAQAEATSGFDSFIMLVPPRD
                     SISIKKNVKVAAEAAALAETRRQQAETMRLGARARIEAKKVEIVRIKDRINVAKKENR
                     DADRAGLEAERKAAEREIDLLERREDLREAETELESKRAEFLALNKKALELELQLAIR
                     RAGRQRKSIGGAGGASLDRVIGELEKQTLEAQRAEAASSIEVSDQEIKTIDRRLELLD
                     AQQKILGGK"
     gene            complement(3087..3266)
                     /locus_tag="VFD73_14235"
     CDS             complement(3087..3266)
                     /locus_tag="VFD73_14235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75156.1"
                     /translation="MVETVRAKAPTVFRVLDSEGRSIGQVVGPRCRPILGYGARTVLL
                     VRGERGMDEPVKACA"
     gene            3438..3971
                     /locus_tag="VFD73_14240"
     CDS             3438..3971
                     /locus_tag="VFD73_14240"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZI75157.1"
                     /translation="MEERELIRRVLAGDPGAERTMYEAHVDRVFRLAYRMTGDADRAQ
                     DYTQETFIRAFDRLAEFRGEAALSTWLGSIAISVTLNGLRKVKRMNQREVSLDDATPV
                     GAGSRESEPDLKSRMTQAIDALPDGYRAVFVMHDVEGYTHEEIASSLGVHPGTSKAQL
                     FRARARLREALADFAKE"
     gene            3975..4661
                     /locus_tag="VFD73_14245"
     CDS             3975..4661
                     /locus_tag="VFD73_14245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75158.1"
                     /translation="MDDRLDDRLQELAGQYNEPPETPREAMWQNIVAARAAQKAETPE
                     PETKADVPVLPIRSAGKFRSIRPLRWAAGVAAVLALGIGIGRLTVHQPATVAAPTPIV
                     VVPSSPQINPTAYRVATTEHLSQAEAFLTLFRASVRGRGDERLASATARQLLATNRLL
                     LDSPASNDASTRVLLQDLELVLAEIAQLSPAPRAHDLDLIKEGLEQGGVLSRLRTAVP
                     AGASPTRGVL"
BASE COUNT          884 a         1450 c         1443 g          924 t
ORIGIN      
        1 catagccctt ctcggagacc accagaagcg tggcatccct ccgcaccacc accatcccga
       61 tcacctcgtc atccttctcc agctcgatgc ctttcacacc ggtggttgcc cgacccatgt
      121 cgcggacatc accctgatgg aaccgaatgc tcatgccgtc cttggtggcc aggacgatgt
      181 cgctgttctg gtcgcacacc tggacatcga tcagctcgtc acccttctcg atgttgatcc
      241 cgcaaatccc gcttgtccgt acgttgccat acgccgagag caccgtcttc ttcacggtgc
      301 cctgccgggt ggcaaagatc agacacttgt catccgtgaa ttcccgaacc ggtaccagcg
      361 cggcgatctg ctcgtccggt cgaatggcaa tgcagttgat gaccggcttc ccgcgggcgg
      421 cccgtccggc ctggggaatt tcatggacct tgagccagta gacctgacct ttgttgctga
      481 agaacatcag gtagtcgtgg gtactggcga tgaagaggtg ctccacccaa tcgtcggcct
      541 tgaggtcggc cccagtgagg cctcgtccgc cgcggcgctg ccgcttatag gtggtgatcg
      601 gaatccgctt gatgtagccg ctgtgggaga tggtgatgac catgtcctct tcggcgatca
      661 ggtcttcgac ggtgaactcg ccctgatcgg ccacgatctc cgtgcggcgg tcgtcgccga
      721 agcttccggc gacttcgtcc atctcctctt tgagaatcgc catccgcttc ggcttggaag
      781 ccaggatgct cttaagctcc ttgatggtcg cccgcacctc cttgagctcg gcctccagct
      841 tctcgatctc cagcccagtg agcttggcta gccgcatgtt gaggatggcg tcactctgct
      901 tctcgctgaa gccgaaccgc ttccggagcc gggcgtccgc ttgcgccgta tcatcggagc
      961 cgcggatgat cttgatcacc tcatcgatgt tgtcgaccgc gatcttcaac ccgtccagga
     1021 tgtgctcgcg ggcctgggcg gcatcgagat cgaattgggt ccgccgggtg atgacgttgt
     1081 gccggtggtc gatgaagtgc tgcagcagtt ccttcaggtt catgatcttg ggcgccccgt
     1141 tggtgagcgc cagcatgatg accccgaagg tcgtctgcat ctgggtatgc ttgtagagct
     1201 ggttcagaac gacattggga atgacgtcac gcttcagctc gatgacgatc cgcatgccat
     1261 ccttgtcgga ctcgtcgttg atcccggtaa tgccctcgat cttcttctcg gctgcaagct
     1321 ccgcgatgga tttgaccagg ttctccttgt tcacctgata ggggatctcg gtgaccacga
     1381 tttgcgaacg gccgctggtc tctcgctcct cgatctgggc ccgggctcgc atgaccactc
     1441 ggcccttgcc gttctcatac gcttccttga tgccctcccg cccgtagatg tacgcgccgg
     1501 tagggaaatc cggtcctttg atgaccttcc tgagctcggc aatggtggct tccgggttgt
     1561 ccaccaggag atggacgccc ttgacgatct ctcggaggtt gtgaggcggg atgttggtgg
     1621 ccataccgac agcgataccg ctcgagccgt tcaccagcag gttcgggatc ttggacggca
     1681 gaaccgtggg ctcctgcagc cgatcgtcga agttggcctg gaaatcgacg gtgttcttgt
     1741 cgatgtcctc cagcatggcc attgccacgc gggtgaggcg ggcctccgtg tagcggtagg
     1801 ccgccgccgg gtcgccatcg accgagccga agttgccctg gccatccacc aacgggtacc
     1861 gcagcgagaa ttcctgaacc atcctcacca gggcgtcata gaccgatcca tcgccatgcg
     1921 gatggtactt tccgagaacg tcaccgacca ccgtcgccga cttcttgtac gcccggcccg
     1981 gaacgaggcc aagctcgttc atggcgtaga ggatcctgcg gtgcaccggc ttgagcccgt
     2041 cgcgcacgtc cggcagggcg cgtgagacaa tgacgctcat cgagtaattg atgaacgact
     2101 gctgcatttc ttcttcgatg agacgcggga ggattcgctc acgcgagttc ggtgcggtca
     2161 tgaatgtcct aggctaaagc ctgttcggat gggggccgtg caagccctga attatagtcg
     2221 ggtccgccgc tcgggagcaa cccggcagta acgagcaaag cgacgatggg acaagaagtt
     2281 actgcaagag agccggccca atttcggggc gcagagtagg gcggctctgg cagacggcat
     2341 cagggaagcc gatactcagc taaagctcgg tggagagcag gtcgacaata ggggcatgcc
     2401 cactccgttc cgatttggcc gaatgctcct ggcgctcgtg ctcctggcag ttccccgact
     2461 ggtcaccgct caagccgagg ccaccagcgg gttcgacagc ttcatcatgc tggtcccgcc
     2521 ccgtgattcg atctcgatca agaagaacgt gaaggtcgcg gcggaggctg ccgccctggc
     2581 tgagacccgc cgtcaacagg cagagacgat gcgcctgggt gccagagccc ggatcgaggc
     2641 caagaaggtc gaaatcgtcc ggatcaagga ccgtatcaac gtagccaaga aggaaaaccg
     2701 ggacgccgac cgggcagggc tggaggccga acgaaaggca gctgaacggg aaatagatct
     2761 cctggagcga agggaagacc tgagggaggc tgagaccgag ctcgagagca aacgcgcgga
     2821 gttcctggcg ctgaacaaga aggccctgga gctcgagctc cagcttgcga ttcgtcgggc
     2881 cggccgccag cgcaaatcta tcgggggagc gggcggagcc agcctggatc gagtgatcgg
     2941 cgagctggaa aagcagacac tcgaggcgca gcgagccgag gcggcttcca gcatcgaggt
     3001 gtcagatcag gaaatcaaga cgatcgatcg ccggctggag ttactggacg cgcagcaaaa
     3061 aattctcggc ggcaaatagc ttcgcttcac gcgcaggcct ttaccggctc atccattccc
     3121 cgctctcccc ttaccagcaa gaccgtcctc gctccatatc ccagaatcgg ccggcagcgc
     3181 ggtcccacca cttggccgat cgatcttccc tcactatcca gaactcggaa aaccgttggc
     3241 gccttcgctc ttaccgtctc caccattgct cgctcctttc agtaacatcc ccaacttcgg
     3301 tttccaatcg tatcgttgag atggcgtaga ccccggaagg gttgcttggc ggtccaccgg
     3361 gccgggcgcg caaccctttg ccggccctct gtgtcagagg tgcggttcaa ccttgggacc
     3421 ctagacctcg gagccgggtg gaagaacgcg agctgatccg ccgagtcttg gcaggtgacc
     3481 ccggcgccga gcgcacgatg tacgaggcgc atgtcgatcg cgtctttcgg ctggcgtatc
     3541 gaatgaccgg agatgccgat cgggcccagg attacaccca ggagaccttt atccgggcct
     3601 ttgaccggct ggccgaattc cgcggcgagg cggcgctctc cacctggttg ggatcaatcg
     3661 cgatctcagt gacgctgaat ggcttacgca aggtaaagag gatgaatcag cgagaggtct
     3721 ccctggacga cgcaacgccg gtgggcgccg gatcccggga atcggagcca gatctcaaga
     3781 gccgaatgac ccaagcgatc gacgcattgc ccgacggcta tcgagccgtc tttgtgatgc
     3841 atgatgtgga agggtatacc cacgaggaaa tcgcgagctc gcttggggtc caccccggaa
     3901 cctcgaaagc tcagttgttc cgtgcgcgcg ctcgtctgag agaagcgctc gcggatttcg
     3961 cgaaggaata ggtgatggac gatcgattgg acgaccgctt gcaggagctc gcgggacaat
     4021 acaacgagcc gccggaaaca ccccgagagg cgatgtggca gaacatcgtt gccgcccggg
     4081 cggcgcaaaa agcggaaacg ccagagcctg aaacgaaggc ggacgtgccg gtgctgccga
     4141 tccggagcgc tggcaagttc cgctcgatcc gcccactccg ctgggccgct ggagtggccg
     4201 cggttttggc tctcgggatt ggaatcgggc gtctgaccgt tcatcagcct gcaaccgttg
     4261 cagctccgac accgatagta gtggtgcctt catcgccaca gataaatccg accgcgtacc
     4321 gggtcgccac cacagagcac ctcagccagg ccgaggcgtt cctgacgctg ttccgggcct
     4381 cggtccgggg acgcggggat gagcgactgg cctcggctac cgctcggcag ttgctcgcaa
     4441 ccaaccggct tctcctggac tcgccggcgt cgaatgatgc gtcaaccaga gtcctgttgc
     4501 aggacctgga gctggttctc gcggaaatcg cccaactttc tccggcgcca cgggctcacg
     4561 atctcgatct gatcaaggaa gggctcgagc aaggcggcgt gctctcccgg ctgagaacgg
     4621 cggttcccgc aggcgcaagc ccgacccgag gagtactctg atgcacgtgc tgacacttgg
     4681 tctcatgatg gccgttcttc a
//
LOCUS       DASRPQ010001241         2726 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_143845, whole genome shotgun sequence.
ACCESSION   DASRPQ010001241 DASRPQ010000000
VERSION     DASRPQ010001241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2726
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143845"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..813
                     /locus_tag="VFD73_14250"
     CDS             <1..813
                     /locus_tag="VFD73_14250"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HZI75159.1"
                     /translation="VRTHRAQRDQAGAWLVAHTGQAVEERDDGTLVAFAPNEAAAVAL
                     VEDLGRELDEVEAQRHRLEVTDWSTRWREGLSARRVGRLTIVPSWLPEASEPDPLTIV
                     LDPETAFGSGEHGSTRAALALLGRLLRSGDDVLDLGSGSGILTIAAVKLGAASAIGIE
                     IDAEANDVAHRNAQRNGVSTRVEFLEGDASALAPLLGPVDLVVSNILRSTNTLLLPAI
                     RRALRPGGVVIFSGMEQSEAEEFRRSLGDSGFAAFQEILDAGWWGVAAVRPE"
     gene            843..1523
                     /locus_tag="VFD73_14255"
     CDS             843..1523
                     /locus_tag="VFD73_14255"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmE family RNA methyltransferase"
                     /protein_id="HZI75160.1"
                     /translation="MGTRVTLDDNEVHHLRVRRARDQEPVELLDGAGLSGRGRLIHSG
                     SDWLVEIESLEHEQAPAELTLAVAAGDRDRFIWMAEKSVELGVTTLVPLLTTHTAAVA
                     TRLKESHLPRLRRSMLEVLKQCGSAWAPTLEDPVPLESFLQQKQPVVRWLADRAGKMI
                     PSQLDTGPLTIVVGPEGGLTGGERADIIAAGYSPVALGPHTLRFETAAVAALAAAGQA
                     RLRGRSHG"
     gene            1516..1863
                     /locus_tag="VFD73_14260"
     CDS             1516..1863
                     /locus_tag="VFD73_14260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HZI75161.1"
                     /translation="MAECLFCKIVAGEIPAKIVKRSDEALAFRDIDPKAPVHLLVIPT
                     RHIPAVRDARGAEGEQLLGRLLAFTAELAGEHGLDAEGYRIVTNTGRNAGQSVDHLHL
                     HLLGGRKLSWPPG"
     gene            complement(1903..2241)
                     /locus_tag="VFD73_14265"
     CDS             complement(1903..2241)
                     /locus_tag="VFD73_14265"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HZI75162.1"
                     /translation="MEADSPARTGGLQNHFHLARRRTLFSAAQTRRAALSAPTNIAEG
                     AAKRGLREFRRYLDISLGSLSELSYLLRFSKDCGVLDEETFQSLEELRSKAGVLTWRL
                     YRCLGRSSHA"
     gene            2469..2666
                     /gene="rpsU"
                     /locus_tag="VFD73_14270"
     CDS             2469..2666
                     /gene="rpsU"
                     /locus_tag="VFD73_14270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002614080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HZI75163.1"
                     /translation="MPEVIIHDDESFERALKRFKKKCEKAGILSDLRKHRHFEKPSEK
                     RKRKMNAAVRKNRRGPRVPRP"
BASE COUNT          543 a          792 c          876 g          515 t
ORIGIN      
        1 gtccgtacgc acagggccca gcgggatcag gccggtgcct ggctggtggc ccacaccggt
       61 caagcggtag aagaacggga cgatggaaca ctggtcgcgt ttgctcctaa cgaggccgcg
      121 gcggtggcgt tggtggaaga cctcgggcgt gagctcgacg aggtagaggc tcaaagacac
      181 cggttggagg tcacggactg gtccacccgt tggcgcgagg gattgagcgc gcgtcgcgtc
      241 ggcaggctga ccatcgttcc ctcctggctg cccgaggcca gcgaacccga cccgctgact
      301 attgtgctcg atccggaaac ggcgtttggc agcggggaac acgggtccac tcgcgccgcg
      361 ctggccttgc tgggtaggct gctccggtcc ggcgatgatg tcctggacct gggcagtgga
      421 agcgggattc tcaccatcgc agcagtcaag cttggagcgg caagtgcaat cgggatcgag
      481 atcgatgccg aggccaatga cgtcgcccac cggaatgcgc aacggaacgg ggtcagcacc
      541 cgggtagagt ttctcgaggg tgacgcttcc gccctcgcgc cgctgctcgg tccggtcgac
      601 cttgtggtat ccaacatcct ccgctccacc aacactcttc tgctgcccgc cattcggcgg
      661 gcactccggc ccggcggtgt ggtcatcttt tccgggatgg agcaatcgga ggctgaggag
      721 ttccgccgat ctctgggaga ctctgggttt gctgcctttc aggaaatttt ggacgcgggc
      781 tggtgggggg ttgctgccgt acgaccggaa tgagggtatt gattccgcgg gcaggtggag
      841 cggtgggcac gcgggtcact ctggacgaca acgaagtgca tcatctgcgg gttcggcgag
      901 cgagagatca ggaaccggtc gagctcctgg atggagccgg gttaagcggc agggggcggc
      961 tgattcacag cggtagcgat tggttggtgg aaatcgagtc gctggaacac gagcaagccc
     1021 cggccgagct gaccctggca gttgctgccg gggatcgtga ccggttcatc tggatggcgg
     1081 aaaagtccgt agagctgggc gtaaccaccc tcgtgccgct gcttaccacc cataccgcag
     1141 ccgtcgccac tcgtctcaag gaaagtcatc tgcctcggct tcggcgcagc atgctcgagg
     1201 tgctcaaaca gtgtgggtcg gcgtgggcgc ctactctcga agatccggtg ccccttgaga
     1261 gttttctcca gcagaagcag ccagttgtga gatggctggc tgaccgcgct gggaaaatga
     1321 ttccgtccca gctcgacacc ggtccactca cgattgtggt cggtccggaa ggcggcctga
     1381 ccggaggaga gcgtgccgac atcattgccg cgggatattc tccggtggca ttaggtccgc
     1441 acacgctcag gttcgagacc gcggcagtgg cggcgctagc tgctgcgggg caggccagac
     1501 ttaggggtcg ttctcatggc tgaatgcctg ttctgtaaga ttgtggccgg cgaaatccca
     1561 gcgaagatcg tgaagcgctc agacgaggct ctggccttca gggatatcga tccgaaggcg
     1621 ccggttcacc tgctggtcat cccaaccaga cacattccgg cagttcgtga tgccagaggc
     1681 gctgaaggcg aacagctgct cgggcgcctg cttgccttta ccgccgagct cgccggggag
     1741 cacggtctcg acgctgaggg atatcgcatc gtcaccaaca ctggccgcaa tgccggacag
     1801 agtgtcgatc acttgcacct gcacctgcta ggggggagaa agctgagctg gccgccgggc
     1861 tgaagcgccg gaaggagcgg aacatgcgga aagggcggaa ggtcaagcgt gggaggatcg
     1921 acccaaacac cgatataagc gccaggttaa cacgccagcc ttacttcgaa gctcctccaa
     1981 cgattggaag gtctcctcat cgagtacgcc gcaatctttg ctgaacctga gcaggtatga
     2041 caactccgag agtgatccga gagaaatgtc caggtagcga cggaattctc tgagtccgcg
     2101 cttggctgct ccttcggcaa tgttggtagg cgcagaaagt gcagccctgc gggtctgagc
     2161 ggcagagaat agcgttcgcc tgcgggccaa gtggaagtga ttctgtaaac ctccagtgcg
     2221 agctggtgag tccgcttcca tgcttcgaac ttctcatacg gcatcattgc ttgaactctg
     2281 cacttttgta ctcatcatat ggtaccgtcg agttgcggcc tgtaccgaat tcccgtagcg
     2341 cattccgccc gtaccactct ttccgccatt tccgccggac taaatgcttg ctccagccac
     2401 agcccccgaa taaattccaa cccattcgaa ttcctgccct taccgggctg agaggggtga
     2461 gcaagcgaat gccagaagtc atcatccacg atgacgagag cttcgaacgg gcgctgaagc
     2521 ggttcaagaa aaagtgtgag aaagccggca tcctttccga ccttcggaaa catcggcact
     2581 tcgaaaagcc gagtgaaaag cgtaagcgga agatgaacgc cgccgtacgc aagaaccgac
     2641 gtggcccccg tgtcccccga ccataatctc gcttctacct tgcgcgcggc cctgaactca
     2701 gcgcgcaagg cacaagacaa agaacg
//
LOCUS       DASRPQ010001242         1059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2676201, whole genome shotgun sequence.
ACCESSION   DASRPQ010001242 DASRPQ010000000
VERSION     DASRPQ010001242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2676201"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..474)
                     /locus_tag="VFD73_14275"
     CDS             complement(<1..474)
                     /locus_tag="VFD73_14275"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HZI75164.1"
                     /translation="MAFDTPRPHATPPRIAEALAFDDVLLVPGYSQILPSATDTRTRL
                     TRTIPLNIPIISAAMDTVTESAMAIAMAQQGGMGVIHKSLDPAEQAAQVRRVKKYESG
                     MVVNPLTIHPDQTLADVTQLMNTHKISGIPVVERDSNRLVGIITHRDVRFASDPAQ"
     gene            707..>1059
                     /locus_tag="VFD73_14280"
     CDS             707..>1059
                     /locus_tag="VFD73_14280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75165.1"
                     /translation="MRLPVYLFERLADDSPQLPKVGPSIQLARFSRPKALPAHLVALL
                     RGVDRPPCRLLSFDDPRVDRCLGGGLALGQLHEIGAAGIDAETGALPASFVAALLARI
                     EPDRPVFWIAPAEDL"
BASE COUNT          190 a          294 c          366 g          209 t
ORIGIN      
        1 ctgcgccgga tcgctggcga agcggacgtc gcgatgcgtg atgatgccaa ccagccggtt
       61 ggagtcgcgc tcgacaaccg gaatgccgct gattttatgg gtgttcatca actgagtgac
      121 atcggcgagc gtctggtcag gatggatggt gagcgggttc accaccatgc ctgactcgta
      181 tttcttgacg cgccgcacct gtgccgcctg ttcggcggga tccagactct tgtggatcac
      241 tcccatgccg ccctgttggg ccatggcgat ggccatggcg gactcagtca cggtgtccat
      301 ggcagctgaa atgatgggaa tgttgagtgg gattgtacgg gtgagacggg tgcgggtgtc
      361 ggtggcggat ggcaggatct gagaatagcc tgggaccagc agcacgtcgt cgaatgctag
      421 cgcttcagcg atgcgaggcg gcgtagcgtg gggacgaggg gtgtcgaatg ccatgggcgg
      481 gtccttccgc taccttggcg gccccacata tgccggcgtc agggagtatg caagcggctg
      541 cagcaacacg aggtcgggca gagaaacggt tctgcgggcc aaacagggaa accctcagcg
      601 gggtcaatac tgggagttcc tggtgcaggc aggcctgacg actcggagcc gcgaatcgag
      661 tcattgactc taggcgctga ctgagaacaa ataaagaaca tcaatcatgc gcttgccagt
      721 ttacctcttc gagcggcttg ccgacgactc cccgcagctt cccaaggtgg ggccgtcgat
      781 ccagctggcc agattcagcc ggcccaaagc cttgccggcg catctggtcg ctctgctacg
      841 tggggtggat aggccgccgt gccggctgct gtcgttcgac gacccgcggg tggatcgttg
      901 cctgggcggt ggcctcgcac tgggccagtt gcacgagatt ggtgcagcag gaattgacgc
      961 agagaccgga gcactgccgg cctccttcgt cgcagccctg ctggctcgca ttgaaccgga
     1021 tcggccggtg ttctggattg ctccggcaga ggatctgca
//
LOCUS       DASRPQ010001243         1014 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_772419, whole genome shotgun sequence.
ACCESSION   DASRPQ010001243 DASRPQ010000000
VERSION     DASRPQ010001243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_772419"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(219..644)
                     /locus_tag="VFD73_14285"
     CDS             complement(219..644)
                     /locus_tag="VFD73_14285"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HZI75166.1"
                     /translation="MSGNRQFVDTNILVYAHDVTAGDKHSRARALVEELWGSRQGCLS
                     VQVLQEFFVTTTRKIPKPLEALAAAQIIDDLAHWHVHSPAVTDVRGAIDIHRRTGASF
                     WDAMILRSAQELGCQILHSEDLVAGQEYDGVEVRNPFPA"
     gene            complement(634..876)
                     /locus_tag="VFD73_14290"
     CDS             complement(634..876)
                     /locus_tag="VFD73_14290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75167.1"
                     /translation="MANQNITLSLPEEDLREARILAARRGTSVSQLLARMLRETVERE
                     TGYDAARERSLALLYEGADLGTRGQATWSRDDLHER"
BASE COUNT          180 a          326 c          331 g          177 t
ORIGIN      
        1 aggccagccg cagaacccgt ctccgccaag taccagaacg cgcatgttat gggagctcca
       61 tcttcgatcc gggatgattc gacggtaccg gccgctaata agtaagtgaa ccccgcatca
      121 acttgatcac cggcagggaa gactaccctg ccgacctgcg cagcaccgcc ggaaccgcca
      181 agacacgcgc atccggccag gtgagcgtcg cggcgcggtc aggccgggaa cgggttgcgg
      241 acttcgacgc cgtcgtattc ctggccagcg accagatcct cggagtgcag gatctggcag
      301 cccagttcct gcgcgctacg caggatcatc gcgtcccaga aggacgctcc ggttcgccgg
      361 tggatgtcaa tggcgccgcg cacatcggta acggccggag agtgcacatg ccagtgagcc
      421 agatcatcga tgatctgggc ggcggccagg gcttcgagcg gcttggggat cttccgggtc
      481 gtggtgacaa agaactcctg cagcacctga acgctcaggc acccttgccg gctaccccac
      541 aactcctcga cgagggcacg ggcccggctg tgcttgtctc cggcggtcac gtcgtgggcg
      601 tagacgagga tgttcgtgtc cacgaactgg cggttaccgc tcatgcaggt cgtcccggga
      661 ccaggtcgcc tggccgcgcg taccgagatc tgctccctcg tacagcaggg ccaggctccg
      721 ttccctggcc gcgtcgtacc cggtctcccg ctctacggtt tccctgagca tgcgggccag
      781 aagctgcgag accgaggtgc cccgccgcgc cgcgagaatc cgcgcttccc tcagatcctc
      841 ttcgggcagg gagagggtga tgttctggtt ggccatcctc gttcctcacg gttctgcgtg
      901 cttcacgtaa agcagtgtaa cacgtaatac cgtgcggggg cgggaaccag gaccgttcgg
      961 gaccatgggt gacgggaccg gtgcgggcgg attaccgcgg aggggacgta atat
//
LOCUS       DASRPQ010001244         1016 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2676510, whole genome shotgun sequence.
ACCESSION   DASRPQ010001244 DASRPQ010000000
VERSION     DASRPQ010001244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2676510"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(703..775)
                     /locus_tag="VFD73_14295"
     tRNA            complement(703..775)
                     /locus_tag="VFD73_14295"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(740..742),aa:Arg,seq:cct)
BASE COUNT          203 a          325 c          304 g          184 t
ORIGIN      
        1 catcggaacg gtggttggca ttatcccagc aggaccacag gccgaataag cagcggcccc
       61 tttcctctct tttgtcgcct ttctgcgagc ctgcggaaca gccagggcga gggtctaccg
      121 tcggcgcctg ctgcacggcg agcaggtcct cgacgacgcc ggcgaatgcg ccaaaaatgc
      181 ggcatgatcc aggcacttct tccctgctcg acgatgacct cgatcggctg gcatgcagat
      241 gcgagatcgg tgacagggat cagttccggc cactggagaa tgtcgacaac cgcctgcgcg
      301 ctggcggccc gatgctcgat cgttgaggac gtaaagagca atcgccagat gtgtggacca
      361 agatcctcag aagactcagc cgggccgaat acggaactgg ctgatctgca ctcgtcacca
      421 caccgaaccc aaacgcaggc cggaggaaat attcgatctg tgaatcgttt gacgatttta
      481 gatgcccagg cgacggtcac gctacgcaac aggctggcca ggagtgtcca gcgactacca
      541 ctcatgcgag gctccgaggt gcggtatgcc agttgccgtt gcttagcttg gctcactttc
      601 ttaacccacc ccgacggtac tccacgggat gacgttcagt cgttaggctc cccacgtggc
      661 tcaccgcaga tgaattaaaa atcgaaatat atctataacc tgcgccccga gtaggactcg
      721 aacctacggc ctactgctta ggaggcagtc gctctatccg ctgagctatc ggggcctgcc
      781 aacgccatag cctacccgga tacacggacg gctgccgccg tgagggccgc ggcggcagcc
      841 gtcatgccag gcaggctggc tcagccggtc agccccgccc ctgctgcgcg gcggccagca
      901 cctgcacgcc gccggcgaac ttggccagct cggcgctgtc ccagccgagc gacacggggg
      961 cctggatgac cacccactgc ccgctggcgt tcttgaaggt gaggatctgg gtgtcg
//
LOCUS       DASRPQ010001245         1120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_772499, whole genome shotgun sequence.
ACCESSION   DASRPQ010001245 DASRPQ010000000
VERSION     DASRPQ010001245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_772499"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..972
                     /locus_tag="VFD73_14300"
     CDS             <1..972
                     /locus_tag="VFD73_14300"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZI75168.1"
                     /translation="PEVEPVFHPDSYGYRPGKSALDAVGTCRQRCWRADWVIDLDIKA
                     FFDSVPWDLILKAVEYHTGQKWVLLYVHRWLQAPIQRPDGTLVERDRGTPQGSAISPL
                     LANVFMHYAFDAWMTREFPGISFERYCDDAVVHCGSERQARQVRDAIAARLAQVGLEL
                     HPDKTRIVYCKDDDRRGDHEVTSFTFLGYEFRPRLAKNKYGKHFVSFLPAVSKQAMKA
                     MGAEIRSWHWAKRSDKSLSDLALMFNSKVQGWINYYGRFYRSRLLYFLRRLNRHLMRW
                     ACRKYKRLKRRERRAMAWLAEIAQRSPRLFAHWRLGARPDGWAMGAG"
BASE COUNT          205 a          337 c          375 g          203 t
ORIGIN      
        1 ccggaagtcg agccggtctt ccatccggac tcatacggct atcggccggg caagtccgcg
       61 ctggatgcgg tcggcacgtg ccggcaacgc tgctggaggg cggactgggt cattgacctg
      121 gacatcaaag ccttcttcga cagcgttccg tgggacctca tcctcaaggc ggtggaatac
      181 cacaccggcc agaagtgggt tctgttgtat gtgcaccggt ggctgcaagc accaatacag
      241 cggccggatg gcacactggt cgagcgggat cgtggaaccc cacaggggtc ggcgatttcc
      301 ccgttgctgg ctaacgtgtt catgcactat gcgttcgatg cgtggatgac ccgggagttc
      361 ccgggcattt cgttcgagcg ttattgtgat gacgcggtgg tgcactgcgg cagcgagcgg
      421 caagcccgtc aggtgcggga tgccatcgcg gcacggctgg cgcaggtggg tctggaactg
      481 catccggaca agacgcgcat cgtctactgc aaggacgacg accggcgtgg cgatcatgag
      541 gtcacgtcgt tcaccttcct ggggtatgag ttccggccgc ggctggccaa gaacaaatac
      601 ggcaagcatt tcgtgtcgtt cctgcccgcg gtcagcaagc aggcgatgaa ggccatggga
      661 gcggagatcc gctcctggca ctgggccaag cgcagcgaca agtccctcag cgacctcgca
      721 ctgatgttca acagcaaagt gcaagggtgg atcaactact acgggcgctt ctaccgctcc
      781 cggttgctct acttcctccg caggctcaac cggcacctga tgcggtgggc ctgccggaaa
      841 tacaaacggc tcaaacgccg ggaacgccgc gcgatggcat ggctggccga gatcgcccaa
      901 cggtctcccc gcctgttcgc gcactggcgg ctcggcgcac gtcctgacgg ctgggcgatg
      961 ggagccggat aagccgagag gcttaagtcc ggttctgcga gcggcggggg gtgagattcc
     1021 cctcgccgac tctcctactg ctgggattta ccgggccgaa ggccgaagcc gagcaggtca
     1081 aggcggaact ggccaggttc ttgcgggaga ccctcgcact
//
LOCUS       DASRPQ010001246         1282 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1725521, whole genome shotgun sequence.
ACCESSION   DASRPQ010001246 DASRPQ010000000
VERSION     DASRPQ010001246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1282
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1725521"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..375)
                     /locus_tag="VFD73_14305"
     CDS             complement(<1..375)
                     /locus_tag="VFD73_14305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75169.1"
                     /translation="MLLLGCVVLAALPVACRREHFTAEDAWWLSLLDQPQQRGRRHYC
                     LSDRDTRRRARPGEATYCLTSYADGEAVYRRDAAGTLIRGWRNLGTFEAARWPALRDS
                     VDRAVAQVVAGARKCRENEPQGR"
     gene            complement(547..783)
                     /locus_tag="VFD73_14310"
     CDS             complement(547..783)
                     /locus_tag="VFD73_14310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75170.1"
                     /translation="MRSRLAKVKPEHKHCYQGISHAWHNAAWLAEVVLQRRRSEPPVW
                     ALDGRALPDEHFEFMGGQGRERSGGCRSRRLDHT"
BASE COUNT          235 a          446 c          402 g          199 t
ORIGIN      
        1 ccgaccctgc ggctcgttct cgcgacactt ccgagcgccc gcgaccactt gcgccaccgc
       61 gcggtccacc gaatcacgca gcgccggcca ccgcgcggcc tcgaacgtgc ccaggttccg
      121 ccatccccga atcagcgtac cagccgcatc ccgccggtac acggcctccc catccgcgta
      181 ggaggtgaga cagtaggtgg cctcaccggg acgtgcgcga cgcctggtgt ccctgtcgct
      241 cagacagtag tggcgtcgcc cacgctgctg cggctgatcc agcagcgaca gccaccacgc
      301 atcctcggcc gtgaagtgct cccgacggca cgccaccggc agcgcagcca ggacaacaca
      361 gcccaggaga agcaaggccc gaggtctcac tgaccccggg cccgccgcgc tgccggcgcg
      421 tctgctcgtc gcgatcgcat catacgtgtc cgcctgatgg caagcagttc ggtgaggagc
      481 ggcgacggtc cagggccatg ctgtccccgc cgaggggccc ggcaaggctt cgttcgcaga
      541 aggggcttac gtgtggtcca atcggcgcga gcggcaccca cccgaccgtt cccgaccctg
      601 cccccccatg aactcgaaat gctcatcggg cagcgcgcgt ccatcgagag cccaaaccgg
      661 cggctccgaa cgcctccgct ggagcacgac ctcagcgagc caggctgcgt tgtgccacgc
      721 atgactgatt ccctgataac aatgcttgtg ctcgggcttc accttagcca gacggctccg
      781 catcctacct ccgatcgagt gcatgcagga agatcgagaa gatacagtcc ggtgctgaat
      841 gtgcgctgcg accgtgctca ccatagggat atgacggcga ggggaagagg gcttgagtgg
      901 ctgtcggctg gctgagacgg tctatcgacc ttggacaggg tctcagtaag tacgctggcg
      961 cacgtgacga gctatcaccg cacagtgcgg tggcgacgcg acggcggtag gtgtaaaaga
     1021 agcagtcaga cgccgagccc gcggggggtg agtttcgcct cccatccgtt cgaacagtgg
     1081 cttccgattg cggggtatgc ccgccatcac cagcgggctc agcagcttag ggcatctcgc
     1141 cgaacgatgt gcccatcctt gcaccccaaa ctcgagccgg actgcaactc ctggagactg
     1201 tcgaggtccg gcacttgcaa cgatggggat ccgctgcgcg gcccgtgcgc gcggcgacaa
     1261 tagacgtcac ccgatagagc ac
//
LOCUS       DASRPQ010001247         1145 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_144105, whole genome shotgun sequence.
ACCESSION   DASRPQ010001247 DASRPQ010000000
VERSION     DASRPQ010001247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144105"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1145
                     /locus_tag="VFD73_14315"
     CDS             <1..>1145
                     /locus_tag="VFD73_14315"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI75171.1"
                     /translation="VMEQHRDFPGATTVWEAAAGPFADLLELERSLAVQGVALAEAGD
                     RCTPEMLARYDRDLERFDREGGYTLAPRIDAVLHGLGFDPDRARTQPLSQLSGGERGR
                     VGLAQQLVAPADLILLDEPTNHLDLETTSWLEGYLRTLDTTVLLISHDRVFLQSVIDH
                     VLHLENGTVVPYRGDYESFVRQRTERRLSQQRAFEKQSRALAQEEDFIRRNIAGQNSA
                     QAKGRRRRLLRVSRLSAPAGEEGTMLLRLEADARGGDQVLVADRLTLAVDDRVLLDGF
                     SARVRRGEVIGLIGPNGSGKTTLLKVFVGERAPDAGEVRIPDSVRVAHYRQDLAQVPT
                     DRSLYQLIADLRPSWGRGAIQGHLGRFGFSGDEVLRSSGTLSGGERA"
BASE COUNT          199 a          352 c          396 g          198 t
ORIGIN      
        1 cggtcatgga gcagcaccgc gactttcctg gtgcgacgac cgtctgggag gcagccgccg
       61 gtccgttcgc ggacctgttg gagctggaac gatcgctggc ggttcaaggc gttgcgctgg
      121 ccgaagccgg cgatcggtgc accccagaga tgctggcccg ctacgaccgc gacctcgagc
      181 ggttcgatcg cgagggtggc tataccctgg ctccccgaat cgatgccgta ctgcacggcc
      241 tgggcttcga tcccgatcgc gctcggaccc agccactcag ccagttgagc ggtggagagc
      301 ggggcagggt aggactggct cagcagctgg ttgcccccgc agacctcatc cttctcgacg
      361 agcccaccaa tcacctcgat ctcgagacca ccagctggct ggagggctat ctccgaacgc
      421 tggataccac cgtgctgctg atcagccacg accgggtctt tctccagagc gtcattgacc
      481 acgtgcttca tctggagaac ggcactgtgg tcccttaccg gggtgactac gaatcgttcg
      541 ttcggcagcg gaccgagcgg cggctgagcc aacaacgggc gttcgagaag cagtcccggg
      601 ctctggccca ggaggaagac tttattcggc gcaacatcgc ggggcagaac agcgcgcagg
      661 cgaaaggccg ccggagacga ttgctgcgag tgagcaggct gagcgcacca gccggcgagg
      721 aggggacaat gttgctgcgc ctggaggccg atgcccgcgg gggagatcag gtgctcgtcg
      781 ccgaccggct caccctggct gtcgatgatc gcgtgctgct ggacggcttc tccgctcggg
      841 tgcgccgcgg cgaggtgatc ggactgattg gaccgaacgg ctcgggaaag acaacgctgc
      901 tcaaagtctt tgtgggcgag cgagctcccg acgccggcga ggtccgaata ccggattcgg
      961 tcagggtggc acattatcgc caggatctgg ctcaggttcc caccgatcgc tcgctctatc
     1021 agctgatcgc cgatctcaga cccagctggg gaaggggagc catccaagga catctcggcc
     1081 ggttcggctt ttcgggggat gaggtgctgc gttccagcgg cacgttgtcg ggaggagagc
     1141 gggcg
//
LOCUS       DASRPQ010001248         1299 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2042143, whole genome shotgun sequence.
ACCESSION   DASRPQ010001248 DASRPQ010000000
VERSION     DASRPQ010001248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2042143"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..605
                     /locus_tag="VFD73_14320"
     CDS             <1..605
                     /locus_tag="VFD73_14320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75172.1"
                     /translation="AANGHWYAVENADDGNPNNPYTDAQLSRIAQILELTSRPENGRF
                     TLQVTDSPDKEGLGMHNMGGAAWGGHSCPDATKNPNHTRSRARAEIVRRAEIIRQHGR
                     YPAQPTPASTAILEDSMLLNKGQDAITPIALPDGIKSVRFFSDQPAQLAVDTRDGKPV
                     TKLDLNNASAQVVAVPHAIHAFVAHRLDGGSNDISAAFSA"
     gene            667..>1299
                     /locus_tag="VFD73_14325"
     CDS             667..>1299
                     /locus_tag="VFD73_14325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75173.1"
                     /translation="MRRVFPGLGAARAAELNSGLNTALRLAGCTTVKRAAMFCAQVGE
                     ESISLTAPTELASGAEYEGRADLGNTHPGDGVRFKGRGFIQITGRFNYGELSRWAHSK
                     GLVPSATYFIDHPGQLETDKYLWLGPIWYWTVARPMNHLADAGNIEGATRAINGGLNG
                     IADRTNRWHLCLRLGKAILPTPASTAILEDSMLLNKGQDAITPIALPDGIK"
BASE COUNT          283 a          418 c          393 g          205 t
ORIGIN      
        1 tagctgcgaa cggtcactgg tatgcggtag agaacgcgga tgacggcaac ccgaataatc
       61 catacaccga cgcgcagctc tcgcgaatcg cacagatcct cgaactgacc tcaaggccgg
      121 agaacggccg gttcaccctc caggtaaccg actcgccgga caaagagggg ctggggatgc
      181 acaacatggg tggcgccgcc tggggcggcc actcctgccc cgatgcgaca aagaacccga
      241 atcatacccg ctcgcgggcc cgcgccgaga tcgtacgtcg cgcagagatc atccgacagc
      301 atgggcggta tccggctcag cccacgcccg cttctacagc aatcctggag gattcaatgc
      361 tgctcaacaa gggtcaggac gcgatcaccc cgatcgcgct gccagacggt atcaagtcgg
      421 tccggttctt ctccgaccag cccgcgcagc ttgcagttga cacccgcgat ggcaagccgg
      481 tgaccaagct ggacctcaac aatgccagcg cacaggtggt agccgtaccc cacgccatcc
      541 acgcattcgt cgcccatcgc cttgatggcg gcagcaacga catatccgcc gctttcagcg
      601 cttgagcgct tcgaaaacga gtccagccaa agcctaggcg ggagacaact gatggatgta
      661 gcaactatgc ggcgagtttt cccgggcctc ggcgcggcgc gggcagcgga gctcaacagc
      721 ggactcaata cggcgttgcg gctggcaggg tgcacgacgg taaaacgcgc agcgatgttc
      781 tgcgcgcagg taggtgagga gtccattagc ctcaccgctc cgaccgagtt ggcgagcggc
      841 gccgagtacg aagggcgtgc cgaccttggc aacacccacc ccggggatgg tgtgcggttc
      901 aagggcaggg gcttcataca gataaccggg cgttttaact acggcgagct ttcccggtgg
      961 gcccactcca aagggctcgt accaagcgca acctacttca tcgaccaccc cgggcagctg
     1021 gaaaccgaca aatacttatg gctcggcccg atctggtact ggaccgtggc ccggccgatg
     1081 aaccatctcg ccgatgccgg aaacatcgag ggcgcgaccc gggccatcaa tggtggcctg
     1141 aacggtatag cggatcggac gaaccgatgg catctgtgcc tcaggctagg gaaggcgatt
     1201 ctgcccacgc ccgcttctac agcaatcctg gaggattcaa tgctgctcaa caagggtcag
     1261 gacgcgatca ccccgatcgc gctgccagac ggcatcaag
//
LOCUS       DASRPQ010001249         2180 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3300891, whole genome shotgun sequence.
ACCESSION   DASRPQ010001249 DASRPQ010000000
VERSION     DASRPQ010001249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2180
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3300891"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(100..660)
                     /locus_tag="VFD73_14330"
     CDS             complement(100..660)
                     /locus_tag="VFD73_14330"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HZI75174.1"
                     /translation="MRGISKGIAALGLGMLLTAPALHAQGAEFTLGGGVGVPTGTFDN
                     AVKTGWLGLVGVSFVPNQWPVGIQIDGQYQQYKFDGSSSLKERFLIGTANIVFKFKTS
                     EESKVRPYLIGGPGIYNLKATGTNDIGTITSGGTTKFGFNAGAGFDFKAGSAGLFIES
                     RFHDVFTSGANVKFIPITAGIRIGGS"
     gene            complement(746..934)
                     /locus_tag="VFD73_14335"
     CDS             complement(746..934)
                     /locus_tag="VFD73_14335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75175.1"
                     /translation="MTSLVGPLRLALALAGFALAALSVALDSHTFGWVAIAVLSISLL
                     LRLVSQRQRREDEADKGL"
     gene            complement(931..1689)
                     /locus_tag="VFD73_14340"
     CDS             complement(931..1689)
                     /locus_tag="VFD73_14340"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HZI75176.1"
                     /translation="MTSALLSSTNGGVLTLTLNRPEKRNALNADLIDLLHQSLERADL
                     DPEVRVILLKGAGKDFCAGADLDELLASAEKSLAENENAALRLGTLFRRIRELPKPVL
                     AMVHGRALAGGAGLATACDLVIAGQGAQLGYPEVQRGFAPAMVMALLRRLVGEKVALD
                     LVLTGRVLPAEEARSAGLISRVVPDAELERHAEVLAAQLAATSATALGITKQLFYQLD
                     TRNLADGIALGARANAVARGTPDFREAIATFLRK"
     gene            complement(1686..>2180)
                     /locus_tag="VFD73_14345"
     CDS             complement(1686..>2180)
                     /locus_tag="VFD73_14345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75177.1"
                     /translation="AVRRSGGKAVRQYALGEGMVEKKKSGSVRSSKKKPRVGTATAVP
                     SSRRTALTQLRWLAHARSGDKGDTANVGLIALEPEYYPILEREVTAPRVARHFKGMAT
                     GVERFELPNLNALNFLLHGALDGGGTISLKTDAQGKVYSTALLRMEIPVPAALARRLS
                     KVRR"
BASE COUNT          419 a          715 c          643 g          403 t
ORIGIN      
        1 actgaaggag ccgcgaacag cgctccagcg agcgccaccg cgactccatt caggagacct
       61 ttcatgctac tcgccaggaa gaggcgagcc caactccggt cagctgccgc ctattctgat
      121 gcctgcagtg atcggaatga acttcacatt agccccactg gtgaacacgt catggaaccg
      181 gctctctatg aacaacccgg cagaaccggc cttgaagtcg aatccggcgc cggcattaaa
      241 cccgaacttt gtcgttccac cggaggtgat cgtcccgata tcgttggtcc cggtggcctt
      301 gaggttgtaa atgccggggc cgccgatgag gtacggacgc accttgctct cttccgatgt
      361 cttgaacttg aatacgatgt ttgcagtccc gatcagaaac cgctccttca gcgacgagga
      421 accgtcgaac ttgtattgct gatactggcc atcgatctgt atccctaccg gccactggtt
      481 cgggacgaac gatacaccca ccagaccgag ccacccggtc ttaacggcgt tgtcgaacgt
      541 tccggttgga acaccgactc caccgcccag ggtgaactcc gcaccctgcg catggagcgc
      601 gggggcagtc agcagcatcc ccaaaccgag agctgcgata ccctttgaga tacctctcat
      661 atcctcctcc tgtcgcgagg tgaagagccc atagctgcgt ggcgtcaaag tagctgtggc
      721 ggattgagcc cacccgtgat tcccgtcaca aacccttatc cgcctcatct tcacgcctct
      781 gccgttgtga cacgaggcgc agcaagagag agatgctcaa gacggcaata gcgacccacc
      841 cgaaggtgtg gctgtccagc gcaacgctga gtgccgccag ggcaaagcct gccagggcca
      901 acgccagtct gagagggcca accagggagg tcacttgcgc aggaaggtgg caatggcctc
      961 gcggaagtcc ggcgtccccc gggcgaccgc attggctctg gctcccaagg caatgccgtc
     1021 ggccaggttc cgagtgtcga gctggtagaa gagctgtttg gtgatgccca gagcggtagc
     1081 actggtggcc gccaactgcg cggcaagcac ctcggcatgc cgctccagtt cagcgtcggg
     1141 caccacccga ctgatcaggc cggcgctcct ggcttcctcg gccggtagta cccgccccgt
     1201 cagtaccaga tccagcgcca ccttctcgcc caccagccgg cggagcagcg ccatcaccat
     1261 ggcgggggcg aatccccgct gaacttcagg gtagccgagc tgcgcaccct gacccgcgat
     1321 gacgagatca catgccgtgg cgagtccggc acctcccgcc agcgcgcgtc cgtgaaccat
     1381 ggcaagaacc ggtttgggca actcgcgaat tcgccggaac agagttccca gccgaagcgc
     1441 cgcgttctcg ttctcggcca acgatttttc ggctgaggcg agcagctcat cgaggtcggc
     1501 gccggcgcag aaatccttcc ctgccccctt gaggaggatt actcgaacct ccgggtccag
     1561 atcggcgcgc tccagcgact gatgcagcag gtcgatcagg tccgcgttga gcgcattgcg
     1621 cttttccggg cgattgagcg tcaaggtgag gacgccgccg ttcgtcgagc tgaggagagc
     1681 cgaggtcatc ggcggacctt cgagagacga cgagccagag cggcgggcac cggaatttcc
     1741 atgcgtaaaa gcgcggtaga gtagaccttt ccctgcgcat cggtcttgag tgaaatggtg
     1801 cctcctccat ccagcgcgcc gtgcaggagg aagttgagcg cgttcaaatt cggcagctcg
     1861 aacctctcca ctccggttgc catgcccttg aagtgccgcg ccactcgcgg agcggtgact
     1921 tcccgctcga gaatcgggta gtactccggc tccagcgcaa tcaatcccac gttggccgtg
     1981 tcacctttgt caccggagcg ggcatgggcc agccatcgga gctgggtcag ggcagtccgg
     2041 cgggacgacg ggacggcggt agcagtcccg actctgggct tcttcttgga gctccttacc
     2101 gacccgctct tctttttctc aaccattcct tctccgagag cgtactgtcg taccgcctta
     2161 ccgcctgacc gcctgaccgc
//
LOCUS       DASRPQ010001250         1218 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2042623, whole genome shotgun sequence.
ACCESSION   DASRPQ010001250 DASRPQ010000000
VERSION     DASRPQ010001250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2042623"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          215 a          401 c          397 g          205 t
ORIGIN      
        1 ccctcaccga agggtaactt tcgagtactg tgcacgaaca gatgcatgtg catcgcgtcg
       61 ttgcacgcct caggctgagg ttcccggcct cgcgggagaa atgatctacg gcgtccgctg
      121 cgcgccattg ttaaaaagct acgtatgttc cgcacgcgca taggcgggac ggaagttgac
      181 gcgagattca gaagtaaagg atgcggccat caacgggccc ggaacggccg gcaggcgact
      241 tctgaatata tattgtacga cgcaaacgct ggataccagc agactctgct gccggtagtc
      301 acacggccag cgaagaaaac cggactcagg tcacaccgac accatcagca tcgccgtact
      361 ggcgggccgg agccaatgga acgccatgaa accccagatg cagtgcgttc tggcgccgtg
      421 aaaccccgga tccagtgcgt ccgcgcccgg gctcaggccc gcgctcactc tcgcgccgac
      481 cgcgctcagc tcgcgccggc ccgggtcagt tcgcgttgct ccggctagcc cgcgtttgct
      541 cggccagctc gctggcggcc cctgcgtccg ctcacgcgtc cgggctcgcg tctactctcg
      601 cgtttgctac ggcgtccgaa caggcgccgg accaggcggg acacccggca gcgtccaggc
      661 aagacgcccc agacagcgaa gaagcctggg ctcggagcgg ggcctggcca ccccgagccc
      721 agacgggaaa ggcgagatat ctctcggccc ttcagtaacg atcatgccgg ttgattctta
      781 cagcacgcta ggacgtagct gtgaacccgc tttcaagtgg attccggatc cagtccgggc
      841 ccggatcctg gcgcgggctg cgcggcagcg tcagatgctc gcgggtggct ggtccgcgcg
      901 gggtggccac gaggtgagct gcccgttcgc ctggccggga agctcactcg aggtccagcc
      961 gcccagatcc tgggcctgat ccgctgactg atggccgcgg ccgaagggta ctggcgcgcc
     1021 cagaagcgcc gaactcgggt attcgccggt gccttccggc gctgattcgg tcagcttgac
     1081 ctgctgaagc ggacctgacg gcaacggacc cgactgaagc gggacctact ggatcggcat
     1141 ctgctggatc ggggcctgcg gcagctgtgc ctgctgcggc aggacctgct gtccgcattg
     1201 tgcgcattca tcgcggtc
//
LOCUS       DASRPQ010001251         1151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1406517, whole genome shotgun sequence.
ACCESSION   DASRPQ010001251 DASRPQ010000000
VERSION     DASRPQ010001251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1406517"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..323
                     /locus_tag="VFD73_14350"
     CDS             <1..323
                     /locus_tag="VFD73_14350"
                     /inference="COORDINATES: protein motif:HMM:NF024980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZI75178.1"
                     /translation="PRSGRPARLDGERKATLKQVVLDGPDVEATGLSAWTLSELCREV
                     EARWGVSYHPSHMGKLMHQLDLSWQKARPSHPKADAAAREAFAKGGCRPPSTTRGRRT
                     ATNA"
     gene            335..835
                     /locus_tag="VFD73_14355"
     CDS             335..835
                     /locus_tag="VFD73_14355"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI75179.1"
                     /translation="MDEARFGQKGRVCHRWFTRGQRPPGLCDQRYSWTHLFAAIRPAT
                     GEGFALVLPEVSVQAMNEFLAQFAATLAEDEHAVMVLDRAGWHTAKTLVIPSNVTLVW
                     LPPYSPEINPVERVWLYLREKHWSHRLLDAGDAILDALCRAWNALTPERLRSLTSYPY
                     LEQVKI"
BASE COUNT          195 a          388 c          376 g          192 t
ORIGIN      
        1 gacctcgctc gggccggcca gcgcggctgg acggggagcg aaaggcgaca ctgaagcaag
       61 tggtgctgga cggccccgac gtggaggcca cgggcctgag cgcctggacc ttgtccgagc
      121 tgtgccggga ggttgaggcg cgctggggtg tgtcgtacca cccctcgcat atgggcaagc
      181 tgatgcacca actcgacctg tcgtggcaga aggcgcgacc gtcgcacccc aaggcggatg
      241 cggcagcgcg cgaggcgttt gcaaaggggg gctgcaggcc gccctcgacg acgcgcgggc
      301 ggcgcacagc gacaaacgcc tgacactgtg gttcatggat gaggccagat ttggccagaa
      361 gggacgcgtc tgccatcgct ggttcacccg cggccagcgc ccgcccggcc tgtgcgacca
      421 gcgctatagc tggacccacc tcttcgccgc catccggccg gctaccggcg agggcttcgc
      481 tctcgtgctg ccggaggtct cggtccaggc gatgaacgag ttcctcgccc agttcgccgc
      541 aacgctagcc gaggatgagc atgcagtcat ggtgctcgac cgggccggct ggcacaccgc
      601 caagacgctg gtgatcccga gcaacgtcac actggtctgg ctgccaccct actcacccga
      661 gatcaacccg gtggagcggg tttggttgta cttgcgcgaa aagcactgga gccaccgcct
      721 gctcgacgcc ggtgacgcca tcctcgatgc gctctgccgc gcctggaatg cactcacccc
      781 agagcgcctg cgcagcctca ccagctaccc ctacttggag caggtcaaga tttaggcgga
      841 tcggtataag ccagagacga gccataggtg tggaagatgc tccgtatcca ttcggccagg
      901 gacgcggttg gtgagcgctg gccggctggc cccgctcacc gcttctgatc gaggatgggc
      961 tccttgaggc tctcgattcc gcgttcggtg aacacggttt gtttgacagc gccaaacatt
     1021 aacctgcccg agccaccggc gtgatcagac ctcctccgcc acgccttcaa gcatcgtgcc
     1081 tgggccatcc gggccgattt cctcggcgat ggcggccagg cgctcccgga cttcccggaa
     1141 ccgcttctcc a
//
LOCUS       DASRPQ010001252         1135 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_145426, whole genome shotgun sequence.
ACCESSION   DASRPQ010001252 DASRPQ010000000
VERSION     DASRPQ010001252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145426"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1135)
                     /locus_tag="VFD73_14360"
     CDS             complement(<1..>1135)
                     /locus_tag="VFD73_14360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75180.1"
                     /translation="LASLPDTPERARKELALQITLGPALFATKDWTAPDVETAYTRAQ
                     VLCRELGESPDLFPALWGLFLFHIARGEIRTGLDQGEQLLSLAQRAQDPGLLLQAHHA
                     LGPTYALVGDWASARIHLEQAIDHYDRRQHCTHAFLYGGHDPCVCCLSFAAKSLWMLG
                     FPEQALQRGREALRLARELGHPTSLAHTQLSVSILHQLRRDVSQTLDLAEALQGLAAD
                     QGLLFYLAGGLVLRGWALVERGRIEEGMAQIRQGFDTGGATRAHWRAYSLALLAEACG
                     KGGNLTEGLAVLAEALTVVEETGIRIYEPEMHRLKGEFLLALDPEKVADAEGHFRQAV
                     AIARRHQTKSLELRATMSLARLRQRQGRRDEARAALAAVYGAYT"
BASE COUNT          190 a          385 c          376 g          184 t
ORIGIN      
        1 cgtgtacgcg ccgtagacgg cggccagcgc ggcgcgggcc tcgtcgcggc ggccctgccg
       61 ttgccggagc cgagccaggc tcatcgtggc ccgcagttcc agggactttg tctgatgtcg
      121 gcgggcgatc gcgacggcct ggcggaaatg accttcggcg tccgccacct tctccggatc
      181 cagggccagc aggaactccc ccttgaggcg gtgcatctct ggctcgtaga tacgtatccc
      241 cgtctcctca actactgtta gcgcttccgc cagcacggcg agcccttccg tgaggtttcc
      301 ccccttgcca caagcctcgg ccaacaaggc aagggaataa gcgcgccagt gggcgcgcgt
      361 ggctcccccc gtatcgaacc cctggcggat ctgtgccatc ccctcctcga tgcgccctcg
      421 ctcaaccaga gcccagcccc gcagaaccaa tcctcccgcc aagtagaaca agagcccctg
      481 atcggcagcg agcccctgga gtgcctcggc caggtctagg gtctgggaca cgtcccggcg
      541 gagttgatgg aggattgaca cagaaagctg cgtatgggcc aggctggtgg ggtggcccag
      601 ctcacgggcc agccggaggg cctcccggcc cctctgcaac gcctgctcgg gaaagccgag
      661 catccaaagc gacttggccg caaagctcag gcagcacacg catgggtcat ggccgccgta
      721 gagaaaagca tgcgtgcagt gctggcggcg gtcatagtgg tcgatggcct gctctaggtg
      781 tatccgtgca gatgcccaat ctcctacgag ggcataggtc ggtcccagcg cgtgatgcgc
      841 ctggaggagg agccccgggt cctgcgcgcg ttgggccagg ctgagcaact gctctccctg
      901 atccagtccc gtccggatct ccccgcgcgc gatgtggaag aggaagagtc cccacaacgc
      961 cgggaagaga tccggcgact ctcccaactc acggcacagg acttgcgcgc gcgtgtaggc
     1021 cgtctccacg tcgggcgccg tccagtcctt ggtggcgaag agggccgggc ccaaggtgat
     1081 ctgcagggcg agttctttgc gggcgcgctc gggggtgtcc ggcaacgacg cgagc
//
LOCUS       DASRPQ010001253         1313 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3606462, whole genome shotgun sequence.
ACCESSION   DASRPQ010001253 DASRPQ010000000
VERSION     DASRPQ010001253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3606462"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            151..438
                     /locus_tag="VFD73_14365"
     CDS             151..438
                     /locus_tag="VFD73_14365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75181.1"
                     /translation="MSRPNACWLSLTAKGVTYEQKWTLTLTAAQVHATLAVAAATAVS
                     TAGPDGHAWADVAATRLSARKQEPSTESPPGHDPSLRRPPPLFPPEDRPSH"
     gene            complement(435..821)
                     /locus_tag="VFD73_14370"
     CDS             complement(435..821)
                     /locus_tag="VFD73_14370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75182.1"
                     /translation="MFDPVQMNQDHRPGPDRILVAQLTGTARHHARWRELAQDEQDAA
                     VTELRELAGGRADLLAEVAGIFEGASEGELDEPLARQAAHLCRLAGADETLIPQWIAE
                     GRHRAEAARMRPHSGQPRSSPLPAPA"
BASE COUNT          222 a          440 c          413 g          238 t
ORIGIN      
        1 gttatggcgg cactcgccga atccggtcaa ttgtgagagg ctacgccgcg catcgtgacc
       61 gcctgggcgc atcgaccagg ctcagactgg ctatcacctc catgccggat actcacccat
      121 ctggaggacc gatgacaggc cctgaatact atgtcgaggc cgaacgcctg ctggctctcg
      181 ctgaccgcca agggcgtcac ctatgagcag aaatggacgc taacgctgac cgccgcacag
      241 gttcatgcca ccctcgcggt cgccgccgcg accgcggtaa gcacggcagg cccggacggc
      301 catgcctggg ccgacgtcgc cgccaccagg ctcagcgccc gcaagcagga gccttctacc
      361 gagagccctc cgggccatga cccttcgttg cgacgacccc cgccgctgtt tccgccggag
      421 gacagaccga gccattaggc cggtgccggt aagggagagc tcctgggttg cccgctgtgc
      481 ggccgcatgc gggcggcttc ggcccggtgc cgtccctccg ctatccactg cgggatcagg
      541 gtctcatccg cacctgccag gcggcatagg tgcgcggcct gcctggcgag cggctcgtcc
      601 agttcgcctt ccgacgcacc ctcgaagatc ccggcgacct cagcgagcag atcggcccgc
      661 ccgccggcga gttcgcggag ttcggtcacc gcggcgtctt gctcgtcctg ggctagctcg
      721 cgccatcggg catgatgccg tgcggtcccg gtgagctggg cgacgaggat gcggtcaggt
      781 ccggggcgat gatcttgatt catctggaca ggatcgaaca cgcttacggt aatagcaagt
      841 cagccagtag atctcccgat caagcggatg ggcgtcggcc cccagtaacc tgtcggcgca
      901 atgacctggc cgtccatcga actgagaggt aggacctcct cggtgtgagc gaattgcata
      961 gaggtcgatg ctggtcgttg ccgcaggttg agcgcctgct ttggtcgcat gaggtcggtg
     1021 ccgggcgaat aggctgctgt actcatctgc tgtatccagc ggactggcct ctgccagtca
     1081 gccgtgattc acgtagtagc caaggccagg aatccatgtc agcagccctt cgccttccag
     1141 tatgtgcagt gccctactgc aggttgtcgg ccaaccgacg cgctgacgct tagctgccgg
     1201 agtaactccc ggccgcaaat cccgccgacg gattctcgct ggctgaagcc tagccagtca
     1261 gtcggtatcc tggcagtcat gccagactca accctccggc ttggagactt ccg
//
LOCUS       DASRPQ010001254         1822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1727117, whole genome shotgun sequence.
ACCESSION   DASRPQ010001254 DASRPQ010000000
VERSION     DASRPQ010001254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1822
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1727117"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..766)
                     /locus_tag="VFD73_14375"
     CDS             complement(<1..766)
                     /locus_tag="VFD73_14375"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HZI75183.1"
                     /translation="MTTPDQSPVVIACATDDRYVQPLAVMLQSVLTNLSVARAIEVYV
                     IDGGIEPGNKRDLVKLWDPDRGTVNWLPAKASQFSGLPLWGRMPVATYYKLLITELLP
                     PALSKTIWLDCDLVVTGDLAELWDMDLAGRHALAVQDPGVPFVSSRDGVACHQQLGLA
                     KHAKYFNAGVMVVNLDLWRSDDIPGRVMEYLRTYGDSVVFWDQEGLNAVLAEKWGELD
                     PRWNLTTSVRSLRLRNNGRPETRAVTPSTPWIVHFTG"
     gene            1080..>1822
                     /locus_tag="VFD73_14380"
     CDS             1080..>1822
                     /locus_tag="VFD73_14380"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI75184.1"
                     /translation="MRVLSILPFPALPLTHGGRVRAYHLAVGLAAAGATVDLACPWHP
                     GLPLHPFWREGITIRPFVFAANLLPAILGDRLVPPLLQLSGQPFTWGPRRLLRRSHEY
                     DLVEFHFCAYASWMSRIGPATRVVYSAHNVELDYAGGEPSSRLRRLLARRVGVLEEQA
                     VRASDLVVACTETDGKRLAKLYGPAKGLAIIANGFDEKELWGVKLPQREVLRAELGVQ
                     PEELAILFIGGPAVHNRRAVQFLEEQLLP"
BASE COUNT          331 a          563 c          536 g          392 t
ORIGIN      
        1 ttccagtgaa gtggacgatc cacggggtac tcggcgtgac tgcccgcgtt tctggtctgc
       61 cattgttccg caatcgcaag ctgcgaacgc tggtggtaag gttccaccgg ggatcgagct
      121 ctccccactt ctccgctagt acggcattca gtccttcctg gtcccagaaa accacgctgt
      181 caccatacgt ccgcaggtac tccatgaccc ggcccggaat gtcatcgctt cgccagaggt
      241 cgaggtttac caccatgaca ccggcgttga agtactttgc atgtttggcg aggccgagtt
      301 gctggtggca tgctactccg tcgcgggagg acacaaaggg aacgcctgga tcctgcaccg
      361 ccaaggcgtg tcgacctgcc aggtccatat cccacagctc tgcgaggtca ccagtgacaa
      421 ccaggtcaca gtccagccaa atggtcttac tgagagccgg cgggagcagc tccgtaatca
      481 gaagcttata gtatgtcgcg accggcatcc tcccccacag cgggagacca gaaaactgtg
      541 atgcctttgc cggcagccag ttcaccgttc cgcgatccgg gtcccacaat ttgaccaaat
      601 ccctcttatt accaggctca ataccgccgt cgatgacgta aacctcgatc gcccgagcca
      661 cgctcaggtt ggtcagtacc gactggagca tcactgcgag gggctggaca taccgatcat
      721 cagtggcgca ggcgatcacg acggggctct ggtccggtgt ggtcatgtcc tttcaaatct
      781 tgctcggctg ggatctttcg ggcacttctg aggagacaac cccagcacct actatgcacc
      841 cgcagtctcc accactgcaa cgggggcgac caggtttggc gaggtggtcc tgcggacagg
      901 gtctcgcttg gtggggtcac gccgacaaag tactattgag gcattcgccg cagctcctca
      961 acaattcata ttccgcgggt ttggtacttg gaaggtcttg gttcgagata ggaaccccta
     1021 tcttcgtaca tccagtcttg ggctgattga caaatgatgc gaggtagggc tacgaccgcg
     1081 tgagagtgct cagcatcctg ccgtttcccg ccttaccgct gacccacggt ggcagggtcc
     1141 gagcatacca cctggccgtc gggcttgccg cggccggtgc taccgtggat ctcgcctgcc
     1201 cctggcaccc gggcctgccg ctacatccat tttggcgcga gggtattacg atccgccctt
     1261 tcgtgttcgc ggctaacctc ctgcccgcca tcttgggcga ccggctggtt cctcccttgc
     1321 tccagctttc cggtcagcct ttcacgtggg ggccaagacg cctgctccga cgatcgcacg
     1381 agtatgacct cgtcgagttc catttctgtg cgtatgcctc ctggatgagt cggatcgggc
     1441 cagcgacgcg agtcgtatac tctgcccaca atgtcgagct ggattatgca ggtggtgagc
     1501 cgtcatccag acttcgccgg cttcttgccc gccgagtcgg cgtgctcgag gagcaggccg
     1561 tacgcgcgag cgatcttgtc gtcgcctgca ccgagaccga cggcaagcgt ctggctaagc
     1621 tctatgggcc tgcgaaaggg ctcgcgatca tcgcgaacgg cttcgatgag aaggagcttt
     1681 ggggcgtgaa gctgccacaa cgggaagtgc ttcgggccga gctgggggtg cagccggagg
     1741 agcttgcgat tctgtttatc ggcggtcctg ccgtccacaa ccgtcgggcg gtccagtttc
     1801 tagaggagca gcttcttcct aa
//
LOCUS       DASRPQ010001255         1091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3607187, whole genome shotgun sequence.
ACCESSION   DASRPQ010001255 DASRPQ010000000
VERSION     DASRPQ010001255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3607187"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            24..>1091
                     /locus_tag="VFD73_14385"
     CDS             24..>1091
                     /locus_tag="VFD73_14385"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HZI75185.1"
                     /translation="MRTNLDAPTYRLYRVDPSQPERSKWREIVPPRPDAVLETVTVAE
                     ERLALAYLERAASRLELTDYDGRLVEQVTLPALGSVFGVSAKWNGREIFYGFSSYTVP
                     PSVYRIDLETGSTELWRRVPADIDSSRFVVRQVSYSSRDGTNISMFLVHPAALELNRD
                     NPTYLTGYGGFNISMTPAFSRSLLLWLEHGGVLAVPNIRGGGEYGESWHQAGMLANKQ
                     NSFDDFIGAAEWLINQGYTRPERLAAAGGSNGGLLVGSVLTQRPDLFRAVLVQVPLLD
                     MLRYHRFLIARLWIPEYGTAEDPAQFEWLRAYSPYHKVRDGVAYPAVLLETAESDTRV
                     DPMHARKMAARLQAASSGDHPI"
BASE COUNT          182 a          340 c          352 g          217 t
ORIGIN      
        1 aaatcgttcg gggatggctc ctgatgcgga ccaatctgga tgcgcccaca taccgccttt
       61 accgggtcga cccttcgcag ccggagcgga gtaagtggcg tgagatcgtg ccgcctcgcc
      121 cggacgcagt cctggagacc gttaccgtgg ccgaggaacg cttggcactg gcctacctgg
      181 agcgggccgc ttcccgcctg gagctgaccg actacgacgg acggctggtc gagcaagtca
      241 ccctaccagc tctgggcagc gtcttcggag tcagcgccaa gtggaacggt cgggagatct
      301 tctacggctt ctcctcatat accgtcccgc cgagtgtcta ccgcatcgac ctcgagaccg
      361 gctcgaccga gctctggcgt cgggttccgg ccgacatcga ctccagccgg ttcgtggttc
      421 gccaggtcag ctattcatcc cgcgacggga ctaatatctc catgttcctg gtgcatcccg
      481 cggctctgga gctgaatcgg gacaacccga cgtatctcac cggatatggc gggttcaaca
      541 tcagcatgac tccagcgttc tcccgttcgc tgctgctttg gctggagcac ggcggggtgc
      601 tggctgtgcc caacattcga ggcggtggtg agtacggaga aagctggcat caggccggta
      661 tgctcgcgaa caagcagaac agcttcgatg atttcattgg tgccgccgaa tggctgatca
      721 accaggggta cacgcgtccg gagcgacttg ctgccgcggg tggctccaat ggagggcttc
      781 tggtgggttc ggtgttgacg cagcgccccg atcttttccg agcggtgctg gtgcaggttc
      841 cgctgctcga catgctgcgc taccatcgct ttctgatcgc gcggctctgg attccggagt
      901 acggtacggc cgaggatccc gcgcagttcg agtggctccg ggcgtattcg ccatatcaca
      961 aggtgcgcga cggcgtggcg tatcccgccg tgctcctgga gaccgcggag agcgataccc
     1021 gagtcgatcc gatgcacgcc cgcaagatgg cggcccggct gcaggcagcg agctctggcg
     1081 atcacccgat t
//
LOCUS       DASRPQ010001256         2012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2964798, whole genome shotgun sequence.
ACCESSION   DASRPQ010001256 DASRPQ010000000
VERSION     DASRPQ010001256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2964798"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(487..663)
                     /locus_tag="VFD73_14390"
     CDS             complement(487..663)
                     /locus_tag="VFD73_14390"
                     /inference="COORDINATES: protein motif:HMM:NF041886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rmf/CrpP family protein"
                     /protein_id="HZI75186.1"
                     /translation="MAEPSGGDPFVEGMDAFGRGVPLDACPYPDGSDQHELWVLGWDE
                     AKRMNENGATAGNQ"
     gene            complement(656..895)
                     /locus_tag="VFD73_14395"
     CDS             complement(656..895)
                     /locus_tag="VFD73_14395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75187.1"
                     /translation="MATGALGPSTTWRRATFAQRTVIAASTLGAPFSWFDFSLFAARS
                     PLIGRELFPDADDSPFRQAIVASVLLGTRHGARHG"
     gene            1042..1185
                     /locus_tag="VFD73_14400"
     CDS             1042..1185
                     /locus_tag="VFD73_14400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75188.1"
                     /translation="MLKQSRCIRTLNNDQRGSTMLTTAVLKRLAVSLFFVATVSAPAL
                     LVA"
     gene            1408..>2012
                     /locus_tag="VFD73_14405"
     CDS             1408..>2012
                     /locus_tag="VFD73_14405"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI75189.1"
                     /translation="MATTQTIDIQEFINARPFTRFQITVLIMCFLVVAADGFDTAAIG
                     FIAPALREQWNLTPPQLSMLFVSGLAGLMVGAFVFGPIADRIGRKAVLIFSTLGFGLA
                     SIASAWATNVEMLAVWRFVTGLGLGGAMPMAITLTSEYSPERSRSFLVTLMFCGFTIG
                     GAFGGLAAAGIIAHYGWQGVLILGGVLPLVLAVVLVFMLPES"
BASE COUNT          349 a          645 c          650 g          368 t
ORIGIN      
        1 gtgtcgttca ccgtctcttg gacggctcgc cgcagcacca tgcgccagta gcccatgcgg
       61 ggctgttaag gctgcggttc cggttttggc aaccgtgccg ctgccgagga ggcacctgaa
      121 atgccggggg ccttgtcccg ccacgatcag tccgggcccg ccgagattga ggccctgctt
      181 cagccgcgtg ccctccatgc tttgaccacg atccctccta gcttggccat tgcgagagag
      241 gccagcgcga gacaacgagg gggtcatggc agaggaggag caggtcgccc ggctcaaggc
      301 gggggtggaa gcctggaacg cttggcggcg cgacggctcg tgcgcccgtt ctgcaggaac
      361 aaggtcacga cggcgtagcc catggcttgc ctcctgccag cgaggatgat gcgcagggat
      421 accggcgcag tcaggtgaag agagcgcgcc ctcagggtga tacgcgccac ctcttcggag
      481 tcattattac tggttgcctg ctgtcgctcc gttctcgttc atgcgtttcg cttcgtccca
      541 ccccagaacc cagagttcat gctgatccga gccgtcaggg tacgggcagg catcgagcgg
      601 aacgccgcgt ccaaacgcgt ccatgccttc gacgaacgga tcaccgccgc tcggttcagc
      661 catggcgcgc tccatgtctc gtgcccagaa gaacagaggc aacgatggcc tgtcggaaag
      721 ggctgtcgtc tgcgtcgggg aacaactccc ggccgatcag gggtgagcgg gcagcaaaga
      781 ggctgaagtc aaaccaggag aagggggccc cgagcgtgga ggccgcgatc accgtgcgct
      841 gggcaaaggt ggctctgcgc cacgtcgtgc tcggaccaag agcgccggtc gccatagtgc
      901 tgggtccgcg ctgatcccga tcaccttaca ccagggctta tgaacgccta tgcgcgtctg
      961 gggtcgagag cacagtggag cgacttgcca tcgcgggctc gctgacggtt gcgacggcaa
     1021 caagaaacaa acgaagccat cgtgctgaaa cagagccggt gcatcaggac actcaacaac
     1081 gatcaaaggg gatcaaccat gctcaccacc gccgttctga agcgcttggc cgtctcgctg
     1141 ttctttgtcg ctacggtctc cgcaccggcc cttttggttg cctgacccca ccgcacgttt
     1201 ctccggacag acggccttct caagaagcta agcaggtttg tggagcccgc cccacggatg
     1261 ctgcccggcc tacaccggca acgcagagca gcgcaaggca caccatctat gggtcttcca
     1321 gcggcagtct gcttaggccg agccgctcgg gacgagccga gagaccgggc atccagccgg
     1381 acagaaaaaa cttagggagc gaacgccgtg gcaaccacac agaccatcga cattcaagag
     1441 ttcatcaacg cgcgcccgtt cacgcgcttc cagatcacag tcttgatcat gtgcttcctg
     1501 gttgtcgcgg cggatgggtt cgacacggcg gcgatcggct tcatcgcgcc ggcgctgcgg
     1561 gagcagtgga acctgacacc cccgcagctc tcgatgctgt tcgtgtcggg gctggccggc
     1621 ttgatggtgg gcgcgttcgt gtttgggccg attgccgacc ggatcggccg caaggccgtc
     1681 ctgatcttct caaccttggg cttcggtctc gccagcatcg cctccgcctg ggccacgaac
     1741 gtcgagatgc tggcggtctg gcgcttcgtg accggcctcg ggctcggggg cgccatgccg
     1801 atggcgatca cgctgacctc ggaatacagc cccgagcgca gccgctcgtt cctcgtcacg
     1861 ctcatgttct gcggcttcac gatcggtggg gctttcggcg gcttagcggc ggcgggcatc
     1921 atcgcccatt acggctggca gggcgtcctg atcctgggcg gcgtgctccc gctcgtcctg
     1981 gccgtggtgc tcgtgttcat gctgccagaa tc
//
LOCUS       DASRPQ010001257         1564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1084034, whole genome shotgun sequence.
ACCESSION   DASRPQ010001257 DASRPQ010000000
VERSION     DASRPQ010001257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1084034"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1564)
                     /locus_tag="VFD73_14410"
     CDS             complement(<1..>1564)
                     /locus_tag="VFD73_14410"
                     /inference="COORDINATES: protein motif:HMM:NF033551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
                     /protein_id="HZI75190.1"
                     /translation="SIDPVVFFKLQLIMFFEGVRSERQLMAMANLNLAHRWYLGYALD
                     EDLPDHSSLTRIRQRLGVDIFQRFFERIVDLCQAARLVWGKELYVDATKIAANADLDS
                     LVPRFYHEATTHVANLFASDAPTEAGTAEMEAAGDVLPAGVIRLPSVASEEIGRTDPP
                     PWRLLEERCLDPNRPASGSYQRTSDFRVSTTDPDATPMRTGTGTRLGYHDHYVVDGGK
                     ARIILAAFMTPADVMENVPLRDLLWRVCFRRKLWPARVVGDTTYGTVENIVALEDAGI
                     RAFFPLPDFDHRTPLFGRDRFAYDAEADLYRCPGNQILRFRKQKHTERVRIYQASATD
                     CNACRLKAQCTRSPHGRQIKRSVDEIYLDRVRRYHATAAYRKAMRKRQVWVEPLFAEA
                     KVWHGLRRLRLRGLLNANIHGLLIATGQNLKRLLAATGWGRRHAPCGSLIALPTASQT
                     GLARSCYHGPEPRPERMRSRQRRSLARVASLQAFFNTLGGYRNRKRIRVRLGNRIGVR
                     LVADDRYRVRRDE"
BASE COUNT          276 a          495 c          528 g          265 t
ORIGIN      
        1 cctcatcacg acggacccgg taacgatcat ccgctaccag ccgcacgccg atccgattcc
       61 ctagccgcac ccggatcctc ttccggttcc ggtaaccccc cagtgtgttg aaaaaggcct
      121 gcagcgaggc gacgcgtgca agcgaccggc gctggcgtga gcgcatccgc tctggtctgg
      181 gttcgggacc gtggtagcag gagcgggcca agccggtttg tgacgccgtg gggagggcga
      241 tgaggctccc acacggggca tgccgccggc cccagcccgt cgcggccaac aagcgcttca
      301 agttctggcc ggtcgcaatc agcagcccgt ggatgttcgc attgagcaag ccgcgtaacc
      361 ggagccggcg taagccgtgc cagaccttcg cctcggcaaa gagcggctcg acccagacct
      421 ggcgcttgcg catcgccttc cggtaggccg cggtggcgtg gtagcggcgc acgcggtcaa
      481 ggtagatctc atcgacgctg cgcttgatct gtcgcccatg ggggctcctg gtgcactgcg
      541 ccttcaatcg gcacgcattg cagtccgtcg ctgacgcctg gtagatgcgc acccgttccg
      601 tgtgcttctg cttacggaag cgcaggatct gattcccggg acagcgatac aggtcagcct
      661 ccgcatcata ggcaaaccga tcgcggccga acaacggcgt gcggtgatcg aaatcgggga
      721 gcgggaagaa ggctcggatg ccggcatcct ccagggccac gatgttctcg accgtgccgt
      781 aggtggtgtc gccgaccacg cgagcgggcc acagcttgcg gcggaagcag acgcgccaca
      841 gcaaatcacg cagggggacg ttctccatga catcggccgg cgtcatgaag gcggccagga
      901 taatgcgggc cttgccgcca tcgaccacat agtgatcgtg gtagcccagg cgggtgccgg
      961 tcccggtgcg catcggggtg gcgtccggat cggtcgtgct cacccgaaag tcgctcgtgc
     1021 gctggtagct gccgctggcc ggccggttgg ggtccaagca tcgctcctcc agcagccgcc
     1081 acggtggtgg atcggtgcgc ccaatctcct cgctagcaac acttggcagc cggatgaccc
     1141 cggctggcaa gacatctcct gcggcctcca tctcagccgt gccagcctcg gtcggggcat
     1201 cgctggcgaa gaggttggcg acgtgcgtcg tggcttcgtg atagaagcgc gggacgagcg
     1261 aatcgaggtc ggcgttggcc gcaatcttgg tggcgtcgac gtagagctct ttcccccaga
     1321 ccaatcgcgc cgcctgacag aggtcgacga tccgttcgaa gaagcgctgg aagatgtcga
     1381 cgcccaaccg ctgtcggatc cgcgtgaggc tggagtggtc ggggagatcc tcatcgagcg
     1441 catagcccag ataccagcgg tgggcgaggt tgaggttggc cattgccata agctggcgct
     1501 cggagcggac cccctcaaag aacatgatca gctgcagctt gaagaagacg acggggtcga
     1561 tgct
//
LOCUS       DASRPQ010001258         1930 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2338810, whole genome shotgun sequence.
ACCESSION   DASRPQ010001258 DASRPQ010000000
VERSION     DASRPQ010001258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2338810"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..503
                     /gene="arsN2"
                     /locus_tag="VFD73_14415"
     CDS             <1..503
                     /gene="arsN2"
                     /locus_tag="VFD73_14415"
                     /inference="COORDINATES: protein motif:HMM:NF040501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="arsenic resistance N-acetyltransferase ArsN2"
                     /protein_id="HZI75191.1"
                     /translation="HPSAEAAPGGNMTTQTGKSDCVTIRSAGSEDLPQVLALLRQANL
                     PTDGVSAAALADFLIAENEGTPIGVVGLEVYRESALLRSAAVEQSWRGSGVGRALIDR
                     ALASTLERGIRDVFLLTTTAEDYFPRFGFACIARESVPDAVQASAEFQGACPSTAVVM
                     RKTMRE"
     gene            complement(601..1179)
                     /locus_tag="VFD73_14420"
     CDS             complement(601..1179)
                     /locus_tag="VFD73_14420"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HZI75192.1"
                     /translation="MAVKIFFPAAVAGLVLSGVAAGASPAAAQQSPSVAADSTFIQTA
                     SSLGLLQVKLGNLAAKKGSSPAVVEYGRRMVADYSKANDTFAAAAKQAAFPSPILIRQ
                     HQQVFDQFQGLGRSSFDKAYMAEMVKEHGEEVELFQKESKDGRVQSLKQLASSMLPDL
                     QQRLALATETARSIGVQVASISPDAGAMSSGK"
     gene            complement(1298..>1930)
                     /locus_tag="VFD73_14425"
     CDS             complement(1298..>1930)
                     /locus_tag="VFD73_14425"
                     /inference="COORDINATES: protein motif:HMM:NF015789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75193.1"
                     /translation="DQFVVLNSAHERVAAWAVAELELQGSLAALIGADTIVLHGGGGV
                     DGIPAALDRLRRGLDRLSSGTRERIALENDDRQFSPTDLLPICRAEGVPLVYDVHHHR
                     CYPDGLTIEEATELAAETWEGREPWCHLSSPRDGWASPNPRPHADYIDPADFPDSWEG
                     RGMTIDVEAKAKERAVLAIRQELESARIAPATSPLRNDYSPSSSRAHTTV"
BASE COUNT          326 a          619 c          602 g          383 t
ORIGIN      
        1 ttcatccgag cgcggaagcc gctcccggag ggaacatgac gactcagact ggaaaatctg
       61 attgcgtaac catccgctca gctggctccg aggacctgcc ccaggtgctg gcactgctgc
      121 gtcaagccaa cctgccgacc gatggcgtga gtgctgctgc actggctgac ttcctgatcg
      181 ccgagaatga aggcactccc atcggcgtcg ttgggctgga ggtataccgg gaatcggctc
      241 tgctacggtc cgccgccgtg gaacagagct ggcgtggcag cggagttggc cgagccctga
      301 tcgatcgcgc tcttgccagt actctggagc ggggaatccg cgatgtcttc ctgctcacca
      361 ccacggcgga ggattatttc cctcgttttg gattcgcctg cattgcccgt gagtcggtac
      421 ccgacgcggt tcaagcatcg gccgagttcc agggtgcctg cccgtcgacg gcagtggtca
      481 tgcggaagac gatgagggag tgatcgaagc ctccgtggca atcccgctgc gtcgccggcg
      541 gagtcctgag cgcggtgctg ctggattgcc acaggcattc ccgcttcgca atgctccgag
      601 ctacttcccg gaggacatcg ctccggcgtc cggggaaatc gacgcgacct gaaccccaat
      661 cgagcgcgcc gtctcggtgg caagcgccaa gcgctgctgc aggtcgggca gcatgctcga
      721 agccagctgc ttcaacgact gtacccgccc gtctttcgat tccttctgga acaattcaac
      781 ctcttcgccg tgctccttca ccatctcggc catgtaagcc ttgtcgaacg aggaacggcc
      841 cagcccctgg aactggtcga agacctgctg gtgctgccgg atcaggattg gggaggggaa
      901 cgctgcctgc ttggcggctg ctgcaaaggt atcgtttgcc ttcgagtagt ccgcgaccat
      961 tctccggcca tactccacga cagccgggct ggaccccttc ttcgctgcga ggttcccgag
     1021 cttcacctgg agcagaccca gactgctggc tgtttgaatg aaggtgctgt ccgcggcgac
     1081 agatggcgat tgctgggcgg cagcgggcga agcccctgca gcgaccccac tcagcaccaa
     1141 gccggcaacc gcagcgggaa agaaaatttt gacggccatg ctctaatctt cctttcggtt
     1201 tctgttgtct actgaccctt gggtttcggt caggacgagt ggccgccgtc gattgtttcg
     1261 accgccggac gatgcaaccg taacgctgtt gtatctgtca gacggtggtg tgtgctcgtg
     1321 atgagctggg agagtagtca ttgcgaagcg gcgaagtcgc tggggcaatc cgggcgcttt
     1381 ccagctcctg tctgattgcc agcactgcgc gctccttggc cttggcctcg acgtctatcg
     1441 tcatcccgcg gccctcccag ctgtccggga agtcggcggg gtcgatgtag tcggcgtgcg
     1501 gacgaggatt gggcgacgcc catccgtctc taggcgaaga gagatggcac cagggttccc
     1561 ggccctccca ggtctccgcc gccagctcgg tcgcctcttc tatcgtgagc ccgtccggat
     1621 agcagcggtg atggtgcacg tcgtacacca gaggcacgcc ctccgctcgg cagattggca
     1681 ggaggtcggt tggagagaac tgccggtcat cgttctccag cgcgattcgc tcgcgggtcc
     1741 cgctgctcag ccgatccaag ccccgccgca ggcgatcgag agcagcggga atcccatcga
     1801 ctccgcctcc accgtgcagc acgatggtgt cggctccgat cagagcggcc agggagcctt
     1861 gcagctccag ctccgccacc gcccaggccg ccactctctc atgtgccgag ttcaggacca
     1921 cgaactgatc
//
LOCUS       DASRPQ010001259         2350 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3608578, whole genome shotgun sequence.
ACCESSION   DASRPQ010001259 DASRPQ010000000
VERSION     DASRPQ010001259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2350
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3608578"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..573
                     /locus_tag="VFD73_14430"
     CDS             <1..573
                     /locus_tag="VFD73_14430"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HZI75194.1"
                     /translation="FVKVLDFGLVKAMGDGDREATMLTAPDSTTGTPAYIAPEMVRGD
                     RVADHRVDIYTLGCVGYWLLTGRLVFQAPNAIQLLYQHANGTPVAPSQRSELEIPAAL
                     DRVILACLAKFPEDRPQTALELSRLLAAAVPESSWNQERAHRWWDRHHPSPSGLHPAD
                     PERRMLSKTIDIGWTPVDAETPELGSVGSR"
     gene            603..2054
                     /locus_tag="VFD73_14435"
     CDS             603..2054
                     /locus_tag="VFD73_14435"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI75195.1"
                     /translation="MAASTPIAAPRVERASPLDRALSLFADVHAGEGSTVLLLALNVF
                     LLFCSYYVIKPIREALILSGGGAEVKSYAAAGQAVLLLILVPAYGALADRLPRRSLLN
                     AVTAFFAVCLVLFYALTRAELPVGVVFFLWVGVFNLMIVAQFWSFANDVYTKEQGERL
                     FAIVAFGGSLGAVVGAALTRQLIPLVGVSESLLVAAGFLIAAAAISNLVDARERHRQE
                     RHLPPALTTAEIPAATGEYQLSMVEDAKKLTVSLPGTGPTGRRGTFRLVFTDRYLLLI
                     ALLMLLLNWVNTTGEYILSRTVTAAAQAGVAAGGTGGLSVEEYIGSFYSSFLFMTSLV
                     AMLLQLFVVSRIIKYLGVRTGIMILPLLALTGYTILAFVPVLALVRTVKIAENATDYS
                     INNTVRNVLFLPTSRDQKYKAKQAIDSFFVRAGDVLSAGLVYLGTTALGFSTTGFARV
                     NLVLAALWVLLALVIGREYSRKSRAVQAGPAAW"
     gene            2051..>2350
                     /locus_tag="VFD73_14440"
     CDS             2051..>2350
                     /locus_tag="VFD73_14440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75196.1"
                     /translation="MIRTGVGLCVVVGLAGCARPAATSQPVPALPRDEVAATLYLIGD
                     AGDPDPAGEPVLRALGRELVSGGRERVVVFLGDNAYPRGLPPSGDPTRPEEERRLS"
BASE COUNT          365 a          769 c          733 g          483 t
ORIGIN      
        1 ttcgtcaagg tcctcgattt cggcctggtc aaggcgatgg gagacggtga ccgtgaggcg
       61 accatgctca ccgcaccgga cagcaccacc ggcaccccgg cgtacatcgc tccggagatg
      121 gtgcggggag accgagtggc ggaccaccga gtggacatct acacccttgg ctgcgtcggc
      181 tattggctgc tcaccgggcg tctggtgttt caggcgccca acgcaattca gttgctctat
      241 cagcacgcca acggcacccc ggtggctcca tcgcagcgga gtgaattgga gattcccgcg
      301 gccctggacc gggtgatcct ggcctgtctc gcgaagtttc ccgaagaccg tcctcagacg
      361 gcgctcgaac tctcccggct tctcgccgcc gccgttcccg aatcttcgtg gaaccaggag
      421 cgcgcgcatc gctggtggga ccggcaccat ccatctccat ccggccttca ccctgctgat
      481 cctgaacgac ggatgctgag caagaccatc gacatcgggt ggactccagt agacgccgag
      541 acgcccgagc ttggttccgt cggatcgcga tgatttgctt caccgggtga ggcggtacca
      601 gaatggctgc cagtactccg attgctgcac cccgggtcga gcgcgcctca cctctcgatc
      661 gcgccctcag cctctttgcc gacgtgcatg cgggtgaggg atccaccgtc ctgctgctgg
      721 ccctgaatgt ctttctgctc ttctgctcct actacgtcat caaaccgatc cgggaagcgc
      781 tgatactctc gggcggcggc gccgaggtga agtcctacgc cgctgcgggt caggcagtgc
      841 tcctgctgat cctggttccc gcgtatgggg cattggccga ccggctacct cgtcggtcgc
      901 tcctgaatgc ggtcaccgcg tttttcgctg tctgtctcgt gctcttctat gcgctcaccc
      961 gggccgagct tccggtcggc gtcgtattct tcctctgggt cggcgtcttc aatctgatga
     1021 ttgtggccca attctggtcg ttcgccaatg acgtctacac caaggaacag ggcgagcggc
     1081 tcttcgccat cgtggcgttt ggcggctccc tcggcgccgt agtgggcgcg gcgctgaccc
     1141 ggcagctcat tccgctggtg ggtgtgtccg agagtctcct ggtcgcagcg ggatttttga
     1201 tcgccgcggc ggcgatcagc aacctggtcg acgcgcgcga acgccaccgg caagagcggc
     1261 accttcctcc ggcgcttacg acggcggaaa ttcccgccgc cactggtgag taccagctca
     1321 gcatggtgga ggacgccaag aagttgacgg tttccctccc cggcaccgga ccgaccggtc
     1381 ggcgaggcac cttccggctg gtcttcaccg atcgctatct cctgctgatc gcgctcttga
     1441 tgttgctgct gaactgggtg aacaccacgg gggagtacat cctgagtcga actgtgaccg
     1501 ccgcggcgca ggccggcgtg gcagctggag ggaccggtgg cctctcagtc gaggagtaca
     1561 tcggaagctt ctactccagc tttttgttca tgaccagttt ggtagcgatg ctgttgcagc
     1621 tgttcgtggt ctctcggatc atcaagtacc tcggggtgag gaccggcatc atgatccttc
     1681 ccctcttggc gctgaccggc tacaccatcc ttgcctttgt cccggtgttg gccctcgttc
     1741 ggacggtgaa gatcgcggaa aacgcaaccg actactcgat caacaacacg gtgcgcaacg
     1801 tgctgtttct tcccaccagc agggaccaga aatacaaagc caagcaggct atcgactcct
     1861 tcttcgtgcg ggccggcgac gtcctgtccg cgggactggt gtatctcggc accactgccc
     1921 tcggtttcag cacgaccggt tttgcccggg tgaatctggt gctcgcggcc ctgtgggtat
     1981 tgctcgccct ggtcatcgga cgggagtaca gccggaagtc gagagcagtt caggccggcc
     2041 cagcagcctg gtgatccgaa ccggtgtcgg gctgtgcgtc gtcgtgggtc ttgccggctg
     2101 cgcccgccct gccgcaacct cccagccggt ccccgcgctg ccccgggatg aggtcgcagc
     2161 caccctctat ctgatcggcg atgccggcga tcctgatcct gcaggagagc cggtgcttcg
     2221 cgcgctcggg cgagagttgg tatccggcgg cagagaacgc gtggtcgtgt tcctgggcga
     2281 caacgcctac ccccgtgggc tgccgccatc gggcgatcca acgcgaccgg aagaggaacg
     2341 acggctcagc
//
LOCUS       DASRPQ010001260         3328 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1084554, whole genome shotgun sequence.
ACCESSION   DASRPQ010001260 DASRPQ010000000
VERSION     DASRPQ010001260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3328
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1084554"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..113
                     /locus_tag="VFD73_14445"
     tRNA            27..113
                     /locus_tag="VFD73_14445"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:61..63,aa:Ser,seq:tga)
     gene            complement(123..1229)
                     /locus_tag="VFD73_14450"
     CDS             complement(123..1229)
                     /locus_tag="VFD73_14450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75197.1"
                     /translation="MSHKVVRELSALGRATWVGCGLFFGAMAAASCSDGTTVASSEFP
                     KDSTPPDSVTPPDSTNLPDSTVAPPDSTPPVPPPPPDSTPVDTAAHSCGGITGGSSGT
                     PVHEGIAFGPATLPPSKFTSPFGATIYTATDPVCLALHLAAARRVNARLFISFTGNET
                     HMVDANGFSMTLWKQRVDRFRNVPMDSYVADGTILGHMIMDEPSDPTNWGGKVVTQAQ
                     IEEMARYSKEIWPTMPTMIRTWPYYLKGGQYPHLDAVRFHYLDRWKPLDDFLAKNMQD
                     ARDLGLAIVGGLNVLNGGAKDSGIPGRASNKFGMNADEIREWGSRFLDEPDLCAFILW
                     EWDDKYFARADIKAAIDELAAKAAAHPKHECRRP"
     gene            complement(1399..2088)
                     /locus_tag="VFD73_14455"
     CDS             complement(1399..2088)
                     /locus_tag="VFD73_14455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75198.1"
                     /translation="MTSRTEAASSTAREERLPEGAAPLLLSSYDWEGNRETLTLADAI
                     QRFRDVNGYVGLPVPAKPHFLKLFRKLINGSRPPELIYLVHDASHVLTGTTFTHDEPP
                     LVLLAAEAAEQGLYFASRGVPKSVGWALFYGGAFVECARRIAPFGQVWRGIQLGIFNR
                     AYEYAKQTRLTNLFHIPIEKLSGMSVAEARRSLGMPAGGIAAELYRTIGIPAWLANAL
                     RREWRSYGINR"
     gene            complement(2085..>3328)
                     /locus_tag="VFD73_14460"
     CDS             complement(2085..>3328)
                     /locus_tag="VFD73_14460"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="asparagine synthase C-terminal domain-containing
                     protein"
                     /protein_id="HZI75199.1"
                     /translation="IDELLAETVKLHLLSDVPVGAFLSGGLDSTLIASYAAKTLGSEL
                     RTFSMGIPYRDLNELPYAAAVAARYGTQHYAEEVTPSVVDDLPRLVSALDEPADPLSI
                     CLLHLAKMTARHVKVVLGGDGGDELFGGYDRYAADRWLDGYRALPEVVRNTVAKQVLR
                     RLPDQFTFKSITHKLRWVDLMARKTGGERYSESLQFFWFNEAHRAELYTTGFRQQLVD
                     QRPDACLLELYATSNAEAAIDRMMYVDSMSRLPGQSLTILDRATMAYSLESRSPFLDP
                     RFAEFMARVPTTLKIRGRRLRYLERRLGERYLPPEVLRRKKQGFASPLMYILEGEVRA
                     LAPRLLLRSELVRAGYLRAERVKQLVDEHLARRYDHGNRIWLLLSAEVWYRRYISRRS
                     EADLEMEIADRLAEPAILSAS"
BASE COUNT          639 a         1033 c         1038 g          618 t
ORIGIN      
        1 cagcgatctc aagacctttc cggccgggcg tggtggcaga gtggttgaat gcagcggtct
       61 tgaaaaccgc cgaacgggaa accgttccgt gagttcgaat ctcacccacg ccgctgaact
      121 gctcagggcc tccggcactc gtgcttggga tgggctgccg ccttggccgc caactcatcg
      181 atggctgcct tgatgtcagc acgggcgaaa tacttgtcat cccattccca gaggatgaac
      241 gcgcagaggt caggctcatc caggaatctg ctgccccact ctcggatctc atcggcgttc
      301 attccgaact tgttgctggc tcggcccggg atgccgctgt ctttcgcgcc gccattgaga
      361 acgttcaatc ccccgacaat cgcaaggcca agatccctgg catcctgcat gttcttggcg
      421 agaaaatcat ccaacggttt ccatcggtcc aaatagtgga agcgtaccgc atcgagatgc
      481 gggtactgac cacctttcag ataatatggc caggtccgaa tcatggtcgg catggtgggc
      541 cagatctctt tgctgtaccg ggccatttcc tcgatttggg cctgggtgac gaccttgcca
      601 ccccagttgg tcgggtcact gggctcatcc ataatcatgt ggcccagaat cgttccgtct
      661 gccacgtacg aatccatcgg gacgttgcga aaccgatcga cgcgctgctt ccacagggtc
      721 atgctgaacc cgttggcgtc gaccatatgc gtttcgttcc cggtaaagct gatgaagagc
      781 ctggcattga ctcggcgggc ggcggcgagg tgcagcgcca ggcacaccgg gtccgttgcg
      841 gtatatatgg tagcgccgaa tggcgaggtg aacttcgacg gcggcagcgt cgccgggccg
      901 aaggcaatgc cttcgtgaac cggcgtaccg gaagagcccc cggtgatgcc gccacagctg
      961 tgcgccgcgg tgtcgaccgg ggtcgagtcc ggcggcggtg gtggaaccgg cggcgtggag
     1021 tccggcggag caacagtgga gtcgggcagg tttgttgagt cgggtggtgt tactgaatcc
     1081 ggcggggtcg agtccttagg gaactcggac gacgccaccg tggtcccatc gctgcaggaa
     1141 gctgcagcca tcgcaccaaa gaacaatccg catcccaccc aggtcgctct cccgagggcg
     1201 gagagctccc gtacgacttt gtgactcacg cgtttctatc gtcaagaaag gagactgaac
     1261 gtcaccgcta caagcatcga ggtaggaagg taccccaccc cagtactcgg cagtgcaagt
     1321 tttgtcatca aaacagccct tgtcaaggct gtggcgggat catctgttga gctgggttgg
     1381 gaggaaaggc tgatggacct accggtttat gccatacgac ctccattccc gacgcagtgc
     1441 attggccagc caggcaggaa tgccaatcgt gcggtacaac tccgccgcta tcccgcccgc
     1501 cggcatcccc aagctgcgcc gagcttccgc caccgacatt ccagagagct tctcgatagg
     1561 gatatggaac agattggtga gtcgggtctg cttggcatac tcataggcac gattgaagat
     1621 gcccagctga atgccgcgcc agacctgtcc gaatggtgcg attctccggg cacactccac
     1681 gaaggctccc ccgtagaaca gggcccaccc gactgacttg ggcactcccc tcgaggcgaa
     1741 gtacagaccc tgttccgctg cctcggccgc gagtagcacc aggggcggct catcgtgggt
     1801 aaaggtggtg ccggtgagca cgtgcgatgc atcgtgcacc aggtagatca gctccggtgg
     1861 ccgggacccg ttgatcagct tgcggaagag cttgaggaaa tgcggcttgg cagggaccgg
     1921 aagtcctacg tacccgttca cgtcccggaa gcgctggatg gcatcggcca gcgtcagcgt
     1981 ttcgcgattc ccctcccaat cataggatga gagcagcaag ggagcggcgc cttccggtag
     2041 cctctcctcg cgagccgtgg atgaagctgc ctccgtccgt gaggtcacga ggcgctcaga
     2101 atagcaggtt ccgccaaccg gtcggcgatt tccatttcca gatcggcttc ggatcggcgg
     2161 ctgatgtaac gtcgatacca gacttccgca ctgagcagga gccagatccg gttgccgtga
     2221 tcgtatcgcc gggcgaggtg ctcatccacg agctgcttca cccgttcggc gcggagatac
     2281 ccggcgcgca ccagctcgct ccgcagcagc agccggggcg cgagcgccct gacttcccct
     2341 tcgaggatgt acatcagcgg cgacgcgaac ccctgcttct tgcgccgaag cacttccggg
     2401 ggcaggtagc gctcgcccag gcggcgctcg agatagcgga gccggcgccc gcggatcttg
     2461 agagtggttg gcactctcgc catgaactcg gcaaagcgcg ggtcgaggaa cggcgaccgg
     2521 gactccagac tgtaggccat cgtcgcccga tccagaatgg tgagcgattg gcccggcagg
     2581 cgggacatgg agtcgacgta catcatgcgg tcgatcgcgg cctcggcgtt cgacgtggcg
     2641 tagagctcga gcaggcacgc atcgggacgc tgatccacca gctgctgccg gaaccccgtc
     2701 gtatagagct ccgcccggtg cgcctcgttg aaccagaaga actgcaggct ctcggagtac
     2761 cgctcgcctc cggtttttcg cgccatgagg tcgacccacc ggagcttgtg ggtgatgctc
     2821 ttgaaggtga actggtcggg cagtcgccgg agcacctgct tggcaacggt atttctcacc
     2881 acctcgggca gggcgcgata gccgtccaac cagcgatccg ccgcgtagcg atcgtagccg
     2941 ccgaacagct catcgccacc gtcaccgccc agaaccacct tgacgtgacg agcggtcatc
     3001 ttggcgaggt gcaggagaca gatcgagaga ggatcggcgg gctcgtccag cgccgaaacc
     3061 aggcgaggca ggtcatcgac cacgctgggc gttacttctt ccgcataatg ctgagttcca
     3121 tagcgggccg cgacggcagc cgcataggga agctcattga ggtcacgata ggggatgccc
     3181 atcgagaacg tgcgcagctc cgatcccagc gtcttcgcgg cgtacgacgc aatcagtgtc
     3241 gagtccaggc ccccgctcag aaacgccccc accggcacat cgctcaacag gtgcagcttg
     3301 accgtttccg ccagcagctc atcgatcc
//
LOCUS       DASRPQ010001261         4368 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4218037, whole genome shotgun sequence.
ACCESSION   DASRPQ010001261 DASRPQ010000000
VERSION     DASRPQ010001261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4368
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4218037"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..231)
                     /locus_tag="VFD73_14465"
     CDS             complement(<1..231)
                     /locus_tag="VFD73_14465"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682784.1"
                     /note="catalyzes the reaction of glycine with
                     5,10-methylenetetrahydrofolate to form L-serine and
                     tetrahydrofolate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HZI75200.1"
                     /translation="MTLDHNASLREADPTVARLIDRELQRQQRGLELIASENFASRAV
                     IDAMGTPLTNKYAEGYPGRRYYGGCEVVDEIEQ"
     gene            complement(228..578)
                     /locus_tag="VFD73_14470"
     CDS             complement(228..578)
                     /locus_tag="VFD73_14470"
                     /inference="COORDINATES: protein motif:HMM:NF004051.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpiB/LacA/LacB family sugar-phosphate isomerase"
                     /protein_id="HZI75201.1"
                     /translation="MDLGTHSSESTDYPDFAHSVASRVEHRDASRGVLLCGSGLGMSY
                     AANRHPGVRAAVAWTPEVAKLSREHNDANVLILPARFVSEAEGIEILRTWLDTGFAGG
                     RHTRRIEKIDREDG"
     gene            complement(841..2016)
                     /locus_tag="VFD73_14475"
     CDS             complement(841..2016)
                     /locus_tag="VFD73_14475"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HZI75202.1"
                     /translation="MSGSVGSSIEPPAYRLPLTAHGSLPAGDPFAQMQTMGHEQLLLS
                     HDPSCGYYGIVAIHDTTLGPALGGTRFWQYGSTEEAITDALRLSRGMTYKSAVAGINL
                     GGGKSVIIGDNHRPDREALFRAHGRFIETLGGRYITAEDIGTSPADMEYIKLETDHVA
                     GLLGLSGDPSPVTAYGVYVGMKAAAKVRWGSDSLSGKTVAIQGCGKVASHLAAHLHEE
                     GAKLIVTDIDAEKVKRVVADTGARAVAPDEIYDQTADVYAPCALGATVNDETLSRLKV
                     QIIAGAANNQLAEDRHGDQLEQRGILYAPDYVINGGGVINVYGELHHWPAERAKKKAG
                     EIYDTLLRIFEIAQQERIPTYRAADRLAEQRIAAVGGLDRMWMGGQRGSGAAGQRGS"
     gene            complement(2027..2887)
                     /locus_tag="VFD73_14480"
     CDS             complement(2027..2887)
                     /locus_tag="VFD73_14480"
                     /EC_number="1.1.1.157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HZI75203.1"
                     /translation="MKRAGVVGAGTMGNGIAHVFAQHGWDVALVDAVPAALDKATATI
                     RVNLERQVKKGTLPAEAPGQVLERIHPSAALDSTRDAEIVIEAASESPTVKFSIFEQL
                     DRICRPETILATNTSSISITEIAARTRRPEQVIGMHFMNPVPVMTLVEVIRGQATSDR
                     TTVSVMEMARELGKTPIEVNDYPGFVSNRVLMPMINEAIFCVMEGVASAESIDTVMKL
                     GMAHPMGPLSLADFIGLDVCLAIMEVLHRGLGDDKYRPCPLLRKMVAAGQLGRKSGRG
                     FYDYAEERKR"
     gene            complement(2884..3738)
                     /locus_tag="VFD73_14485"
     CDS             complement(2884..3738)
                     /locus_tag="VFD73_14485"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HZI75204.1"
                     /translation="MPKAIGWSIAFMLLGIVVSALLLAGWAQLAYGDVAKGLGTLAQP
                     GPTQTIVAGFSQLLGFTFATWLIGFRALHLNRAQLRWTDPHTGAPGLLTGLALGAAAA
                     GSSLLAAVLVANSHWSRDVGGLADYVTQVTKTSLVLAPAALSEEVMFRGVPLVLLAAV
                     AGRGTALVLVAGFVFALFHGLNPGITPLGLGNIALAGIFLGVAFYAPGGLWTAFGAHL
                     GWNATLAALDAPVSGLPFSIPYIDYRAGDPIWLSGGKFGPEGGLLATAALTVVLVATL
                     GLIRTDRS"
     gene            complement(3771..>4368)
                     /locus_tag="VFD73_14490"
     CDS             complement(3771..>4368)
                     /locus_tag="VFD73_14490"
                     /inference="COORDINATES: protein motif:HMM:NF014669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HZI75205.1"
                     /translation="ASVMNPEFGPAPVDTTPVSARGTPVARRVFFAVAGALIVAVAAQ
                     FVVPVPMSPVPMTLQPLAVLVVGGLLGAAEGVSALVLYLVLGALGLPVFAAGGAGALR
                     FVGPTGGYLLAFPVAAGVTGALVAPSPRSIARVLLACAFGMLLIHLGGVAQLALLGRD
                     SALALRVGFLPFLTGDLLKVGLAAAVILAVGPKFRSWR"
BASE COUNT          831 a         1438 c         1365 g          734 t
ORIGIN      
        1 ctgctcgatc tcgtcgacca cttcgcagcc tccatagtac cgcctgccgg ggtagccttc
       61 ggcgtacttg ttggtcagcg gagttcccat ggcatcgatc accgcccggc tggcgaagtt
      121 ctcgctggca ataagctcca acccgcgctg ctgtcgctgc agctcgcgat cgatcagccg
      181 ggcgacggtc ggatccgcct cacgaagcga tgcgttgtgg tccagcgtca tccatcctcc
      241 cgatcgatct tttcgattct ccgggtgtga cggccgccgg cgaatccggt gtcgagccag
      301 gttctcagaa tctcaatccc ttccgcttca ctcacgaaac gcgcgggaag aatcagcacg
      361 tttgcgtcgt tgtgctcgcg cgagagcttg gccacctccg gcgtccaggc caccgctgcg
      421 cgaaccccgg ggtgccggtt ggccgcgtac gacatcccga gtccactgcc gcagaggagc
      481 acaccacggc tcgcgtcgcg atgctcgacc ctggatgcca cgctgtgcgc gaaatcaggg
      541 tagtcggtcg attccgagct gtgcgtgccc agatccaacg gctgataccc ccaacgaccg
      601 cagctcctct accaaccgtt ccttcaactg aaagccggcg tggtccgatc caatcggaat
      661 gacttcggcc attgtctaat gtatagaaga tgacggaaca gacggaagga gcggtagtgg
      721 ccgaacctgt cgcgagcaac gtttgtacca tgtgatttgt caatagtggg cggggcagcg
      781 gggccgcggg gcggcaacat caaagggctg cggcagaaca gaagggcgtc tccgctgtcc
      841 tcaactgccc cgctgccccg ctgccccgct gccccgctga ccacccatcc acatacggtc
      901 cagtccacca acggccgcaa tgcgctgttc cgccagccgg tcggctgccc ggtaggtggg
      961 gatccgctcc tgctgcgcga tctcgaaaat ccggagcagc gtatcgtaga tctcgccggc
     1021 ttttttcttg gcccgctcgg ccggccagtg gtgcagctcg ccatagacgt tgataacacc
     1081 gccgccgttg atgacatagt ccggagcgta gagaatgcct cgctgctcca gctgatcgcc
     1141 atggcggtcc tctgccagct ggttgttagc tgcgccggca atgatctgaa ccttaaggcg
     1201 gctcagtgtc tcatcgttca ccgtagcgcc gagcgcgcac ggagcataga cgtcagcggt
     1261 ctgatcgtag atctcgtccg gggcgaccgc acgcgcgccg gtgtccgcca cgacgcgttt
     1321 cactttctcc gcgtcgatat cggtcacgat aagcttggcg ccttcctcat gcagatgggc
     1381 tgcgagatgg ctcgccacct ttccgcaccc ctgaatggca acggtcttgc ccgaaaggct
     1441 gtcgcttccc cagcgaacct tggccgccgc cttcatcccg acatagacgc cgtaggcggt
     1501 caccggtgag gggtcgcccg aaagacccag caggccggcg acgtgatcgg tctccagctt
     1561 gatgtactcc atgtcggccg ggctggttcc gatgtcttcg gcagtgatgt agcggccgcc
     1621 gagcgtctcg atgaaccggc cgtgtgcccg aaagagtgcc tcacgatccg gccggtgatt
     1681 gtcaccgatg atgaccgatt tgccgccgcc gagattgatc ccggccacgg cggacttgta
     1741 ggtcatgccg cgcgagagtc gcagcgcgtc ggtgatcgcc tcctcggtgc tgccgtattg
     1801 ccaaaatcgg gttccgccga gcgccggtcc cagtgtggta tcgtggatcg ccacgattcc
     1861 gtagtagccg cacgacggat cgtgcgagag cagcagctgt tcatgcccca tggtctgcat
     1921 ctgagcaaat ggatctccgg ccggcagcga cccgtgagca gtgagcggta agcggtaagc
     1981 gggaggctcg atcgagcttc ccaccgatcc gctcaccgct aaccgctcac ctcttacgtt
     2041 cttcggcata gtcataaaac cctcgcccac ttttgcggcc aagctgcccc gccgcgacca
     2101 tcttgcgcag caacggacag ggccggtatt tgtcgtcgcc caggccccgg tgaagcacct
     2161 ccatgatcgc caggcagaca tccaggccga tgaaatcggc caggctcagg ggccccatcg
     2221 gatgcgccat gccgagcttc atgacggtgt cgatcgactc ggcggaagcg actccctcca
     2281 tcacacagaa tatcgcttcg ttgatcatcg gcatgagcac gcgattggac acgaagccgg
     2341 gataatcgtt gacctcgatg ggggtcttgc ccagctcccg cgccatctcc atcactgaca
     2401 cggtcgtgcg atcgctggtg gcctgtcccc ggatgacttc gaccagggtc atcaccggca
     2461 ctggattcat gaaatgcatg ccgatgacct gttcggggcg gcgggtgcga gcggcaatct
     2521 cggtgatgga aatcgagctg gtgttggtag cgaggatcgt ctcgggccgg cagatccggt
     2581 cgagctgctc gaagatggaa aatttgacgg tggggctttc actcgccgct tcaatcacga
     2641 tctcggcatc gcgagtgctg tccaatgcgg cgctcgggtg aatgcgctcg agcacctgtc
     2701 cgggcgcttc ggccggaagc gttcctttct tgacctgtcg ctccaggttg acccggattg
     2761 tcgccgtcgc cttatccagc gcggccggca cggcatccac cagcgcgacg tcccagccgt
     2821 gctgggcgaa cacgtgcgca atgccgtttc ccatggttcc cgctccaacc accccggcgc
     2881 gcttcacgag cgatccgttc ggatgagccc cagagtggcc accagaacca cagtgagcgc
     2941 agccgtcgca agcagcccgc cttccggacc aaacttgccg cccgagagcc agattgggtc
     3001 tcccgcgcga tagtcgatat aaggaatact gaacggcaat ccgctgaccg gcgcatccag
     3061 cgccgccagc gtcgcattcc agccgaggtg ggcgccgaac gccgtccaga ggccaccggg
     3121 cgcgtagaag gcgaccccga gaaagattcc ggcgagcgca atgttgccga gaccgagcgg
     3181 tgtgatgccg ggattcaatc cgtggaacag cgcaaagacg aaaccggcca cgagcacgag
     3241 cgcagttccc cgccccgcca ccgcagccag caacaccagg ggaacacccc ggaacatgac
     3301 ttcttcgctc aatgccgctg gggccagcac cagcgacgtc ttggtgacct gagtgacgta
     3361 gtcggccaaa cccccgacat cgcgcgacca atgggagttt gccaccagca ccgccgcgag
     3421 gagcgaggag ccggctgcgg cggcgccgag tgcgagaccg gtcagcaggc cgggagcgcc
     3481 ggtgtgcggg tcggtccagc ggagctgagc gcgattcaga tggagtgccc tgaacccgat
     3541 gagccaggtg gcaaaggtga agccgaggag ttggctgaac ccggcgacga tcgtctgggt
     3601 cggcccgggc tgcgccaagg tgccgagccc tttggccaca tctccatagg ccagctgggc
     3661 ccagccggcg aggagcagcg cactgacaac gatgcccagc aacatgaagg cgatcgacca
     3721 gccgatcgcc ttgggcacag tcaaactgtc tggggcgctc gccgaagagg tcaacgccaa
     3781 gaacggaact tggggccgac cgccaggatg acggcggccg ctaagccgac cttgagaaga
     3841 tcaccggtaa ggaatggaag aaagccgacc cggagcgcca gagcggaatc ccgaccgagc
     3901 agcgccaact gagcgacacc gccgaggtga atcagcagca tcccgaaggc gcaggcgaga
     3961 aggacgcggg caatggatct gggcgacggc gccaccagcg cgccggtgac ccctgcggca
     4021 accggaaagg cgagcagata gccgccggtt ggaccgacaa agcgaagtgc tcccgctccg
     4081 ccggcagcaa acacggggag cccgagcgcg ccgaggacga ggtacagcac cagagcgctt
     4141 actccttcag ccgcacccag cagtccaccg accaccagca ctgccagtgg ttggagcgtc
     4201 atgggcacgg gactcatggg caccggcacc acgaattggg cggcgacggc cacgatcagc
     4261 gctccggcca ccgcaaagaa cacccggcgg gccaccggag tgccacgggc tgagaccggt
     4321 gtagtatcga ccggtgcggg accgaactcc ggattcatta cagaagct
//
LOCUS       DASRPQ010001262         1367 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1084666, whole genome shotgun sequence.
ACCESSION   DASRPQ010001262 DASRPQ010000000
VERSION     DASRPQ010001262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1367
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1084666"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1367)
                     /locus_tag="VFD73_14495"
     CDS             complement(<1..>1367)
                     /locus_tag="VFD73_14495"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZI75206.1"
                     /translation="QSTPGQVHTHRESTERQYALAERAVDLGWDRSQVHILDHDLGKS
                     GTTTEGRTDFHRLMAAVGLGEVGAVLALEASRLSRSQADWHKLMDICALTDTLIVDQD
                     GIYDPNAFNDRVLLGFKGTWSHTELHALRLRLQDAKLHKARKGELRYNPPTGYIYDAA
                     GSLILDPDESVVAAVARLFQQFQELGSAFGVMRAWATQGLPFPRRQWLPGASGALAWG
                     RLSLSRVLAILHNPRYTGTYVYGRRRSQPVVEAGQVTRVRTLQKPQHEWTVVIPDAHP
                     AYISWEQYVANIAQLTRNRTNLPSVPGRPREGAALLQGLVLCGRCGRRMSVRYQGTGG
                     RHPIYECQRRRLHDGQGGMCWSVPARPVDAAVEAYVLAAVTPANLELALEVLTQFEQD
                     AAERDHQWQLQLERARYEAQRAERQYDAVDPDNRLVARTLERRWNEKLQQLQDLAQAY
                     TTAQR"
BASE COUNT          249 a          452 c          412 g          254 t
ORIGIN      
        1 gcgctgcgcc gtcgtatagg cctgtgcgag gtcctggagc tgttggagtt tctcattcca
       61 ccgccgctcc agggtgcgag ccaccagccg gttgtcagga tcgactgcat cgtattggcg
      121 ctcggcccgc tgggcttcat agcgggcgcg ctccagttgg agctgccact gatggtcccg
      181 ctccgcggcg tcctgctcaa actgggtgag tacttctaag gccagctcga gattggcggg
      241 tgtcacagcg gcgagcacat aggcttcgac ggcggcatcc acaggtcgtg ccggcacact
      301 ccaacacatg cctccctgcc catcgtgcag acgccggcgc tggcattcgt agatggggtg
      361 gcgacctccc gtgccctgat agcgcaccga catccgccgg ccgcatcgcc cgcagagtac
      421 taaaccttgc aggagcgcgg caccttcccg gggacgcccg ggcacactcg gcagattggt
      481 gcgattgcgg gtcaactgcg cgatattggc cacatattgc tcccaactga tataggccgg
      541 atgggcgtcg gggatgacca ccgtccactc gtgctggggc ttttgcagtg tccgtacccg
      601 cgtgacctgc cccgcttcca ccacgggttg gctccggcgg cgtccataga cataggtccc
      661 ggtatagcgc ggattatgca agatggctaa gacgcggctc aagctcaagc ggccccaggc
      721 gagagcccca ctcgcgcccg gcagccactg ccgccgagga aagggcaggc cctgggtcgc
      781 ccaggcccgc atcacgccaa aggcactgcc aagctcctgg aactgctgaa acagccgggc
      841 taccgccgcg accacgctct catcgggatc caagatcaac gacccagcgg catcgtagat
      901 gtaccccgtt ggggggttat accgcagttc ccctttccgc gccttgtgga gcttcgcatc
      961 ctgcagacgc aaccgcaggg catggagctc cgtgtgactc caggtcccct taaatcctaa
     1021 caaaacgcga tcgttaaagg cattcggatc ataaatgcca tcctgatcca cgatcagcgt
     1081 atcggtcaag gcgcagatat ccatgagctt atgccaatcg gcttgtgacc gggataagcg
     1141 cgaggcttct aacgccaaga cggcgccgac ctcgcccagg ccgacggcgg ccattaagcg
     1201 gtggaaatca gtccgtccct ccgtggtagt gccgctcttg ccgagatcgt gatccagaat
     1261 atgcacctgg ctccgatccc agccgaggtc gacggcccgc tccgcgaggg catactgccg
     1321 ttccgtactt tcacgatgcg tgtgtacctg tccgggtgtc gactggc
//
LOCUS       DASRPQ010001263         2179 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4545563, whole genome shotgun sequence.
ACCESSION   DASRPQ010001263 DASRPQ010000000
VERSION     DASRPQ010001263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2179
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4545563"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..279
                     /locus_tag="VFD73_14500"
     CDS             <1..279
                     /locus_tag="VFD73_14500"
                     /inference="COORDINATES: protein motif:HMM:NF012618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75207.1"
                     /translation="GLDGTVRLWDVADPAHPQPLGQPLTSGVALDSVAFSGDGHTLAS
                     GGDDGTTRLWDLNVRYAIERICATAGGLTPGEWNMYMPELQYQPSCIP"
     gene            complement(737..>2179)
                     /locus_tag="VFD73_14505"
     CDS             complement(737..>2179)
                     /locus_tag="VFD73_14505"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF017464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13-type metalloendopeptidase"
                     /protein_id="HZI75208.1"
                     /translation="DAFAGHVQRMFELAGLPDADRAARRVFELETAVAGHHWDKVASR
                     DREKTYNLFTWTGVLSEGPDLRRWLAALDPPAGAFDEIVLRQPGFSAGLASLLTSEHV
                     LAWRDWLCWRVIHSAAGYLSEAFVQEDFDFYGRVLSGTPQLRERWKRGVSLVQWAMGE
                     AVGRVYVGRHFPPGARERMDVLVANLLQAYRQSINKLEWMGTDTRRRALGKLGKFTPK
                     IGYPDRWRDYSSLRIDLADLMANVRAAHAFEFHRQLDKIGKPVDRDEWHMTPQTVNAY
                     YNSGMNEIVFPAAILQDPFFNPDRDDAANYGAIGAIIGHEIGHGFDDQGSKYDGDGKL
                     TDWWSAADRQAFETRTRSLIEQYNSLAPKQTPDQHVNGALTIGENIGDLGGLGIAWKA
                     YQVSLHGEEAPVIDGLTGGQRFFLSWARVWKQKTRDEEAIRLLAIDPHSPGEFRCNQI
                     VRNLDEFYGAFDVGANDELWLEPATRVRIW"
BASE COUNT          371 a          737 c          677 g          394 t
ORIGIN      
        1 ggcctcgacg gcaccgtccg gctgtgggat gttgccgatc cggcgcaccc ccagccgctg
       61 ggtcagcccc tgaccagcgg cgtcgccctg gattcggtgg cattcagcgg cgatgggcat
      121 acgctggcca gcggcggcga cgacggcacg acccggctct gggacctgaa cgtccggtac
      181 gccatcgaaa gaatctgtgc cacagccgga ggcctaacgc ccggggagtg gaacatgtac
      241 atgcccgaac tgcaatacca gccatcctgc attccgtgac cggagaatca ttgacctgag
      301 ccgaactccg ttcgccggct taccgtgccg ccttgctccc cagttctgcg cggatcatga
      361 ataactcaag gaccttagcc aatgctagcc tcgagcattg gccaagtgct cttgcagccg
      421 cgcgtggcgg aactggtacc cggcgcccgc ccggatgcgc gattacgatc cagcgttcaa
      481 agacttggtg gctgggtgtg cgatggcgga gggcataccg ttgttgcgcg ggctgcggtc
      541 gcgctacagc acggacggcg ccgttcccct cagccgcggg tatccagcgg ccactatcgt
      601 ctcggtcgat gagcacaagc tcatcccgaa ctaccgcctg gacaccgatg tgccggagca
      661 cgtcgacttt cgttcggcgg gcctatggcg gcgcggtcgt gaccagccgg cgggctgtgt
      721 ggccgtgtgg tcctggctac cagatacgga cccgggtggc aggttcgagc cacagctcgt
      781 cgttagcgcc gacatcaaat gcgccgtaga actcgtcgag gttccgcacg atctggttgc
      841 agcggaactc gccgggggaa tgcgggtcga tggcgagcag ccggatggct tcctcgtccc
      901 gggtcttttg cttccagacc cgggcccacg acaggaagaa gcgctggccg cccgtcaaac
      961 cgtcgattac cggtgcctcc tcgccgtgca acgacacctg ataggccttc cacgcgatac
     1021 ccaggcctcc aaggtccccg atgttctccc cgatcgtcag cgctccgttc acatgctggt
     1081 caggagtctg cttcggcgcc aggctgttgt actgctcgat cagcgaccgg gtccgggttt
     1141 cgaacgcttg ccggtccgct gcgctccacc agtcggtgag cttgccgtca ccgtcatatt
     1201 tggaaccttg gtcgtcgaag ccgtggccga tctcatgacc gatgattgcg ccgatcgctc
     1261 cgtagttggc cgcatcgtcg cgatcgggat tgaagaacgg atcctgcaag atcgcagctg
     1321 ggaacacgat ctcgttcatg cccgagttgt agtaggcgtt gaccgtctgg ggcgtcatgt
     1381 gccactcatc gcggtcgacc ggtttgccga tcttgtccaa ctggcggtga aactcgaaag
     1441 catgagccgc ccgcacgttg gccatgagat ccgccaggtc gatccgcagg ctggagtagt
     1501 cccgccatct atccgggtag ccgatcttcg gcgtgaactt cccaagcttg cccaaggccc
     1561 gtcggcgggt gtctgtcccc atccattcaa gcttgttgat gctctggcgg taagcctgga
     1621 gcaggttagc caccaagacg tccatccgct cccgagcccc aggtggaaag tgccggccga
     1681 cgtagacccg gccgacagct tcccccatcg cccactggac cagcgagaca ccccgcttcc
     1741 agcgctcacg cagctggggg gtgccgctca ggacgcggcc gtaaaagtcg aaatcttcct
     1801 ggacgaacgc ctcggacagg tacccggcag cgctgtggat gacccgccag cacagccagt
     1861 cccgccacgc cagaacgtgc tcgctggtga gcaacgaggc cagcccggcg ctgaagcccg
     1921 gctggcggag cacgatctcg tcgaaggctc cagcgggcgg gtccagggcc gccagccacc
     1981 tgcgcaggtc cggcccctcc gacaacacgc cggtccaggt gaacaggttg tatgtcttct
     2041 cgcggtcgcg gctcgcgact ttgtcccagt ggtgcccagc caccgccgtc tccagctcga
     2101 acactcgcct ggctgcccta tcggcgtccg gcaacccggc cagctcgaac atgcgctgca
     2161 catgaccagc gaacgcgtc
//
LOCUS       DASRPQ010001264         3301 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2045193, whole genome shotgun sequence.
ACCESSION   DASRPQ010001264 DASRPQ010000000
VERSION     DASRPQ010001264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3301
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2045193"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1154
                     /locus_tag="VFD73_14510"
     CDS             <1..1154
                     /locus_tag="VFD73_14510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HZI75209.1"
                     /translation="RVGRVNVIGLAGERKGRSRRRGYEWRDYIRATPRVNVQGEAVAE
                     QELKDISIIGGGPTGLFAAFYAGMRGASARIIDALPALGGQLMALYPEKYIFDVAGFP
                     KVLAKDLVRDMAAQALQFGATTHLGEVVSGLRRVQNGDAAHFVLETSGGEYPSKTIII
                     AAGIGAFEARRLGIENEDVYEEKGLYFKVLDPKQFQGKRVLLVGGGDSAFDWAVNLQG
                     IAKSVLLIHRREGFRAHQATINQVQELHQRGVCELRTFWEVKALHGNGKVERVTIFNN
                     KTKEEETLEIDAVIPLLGFHSDLGAIKQWGLDTEKADIKVDQLMATNVPGIYAAGDIT
                     SYLGKLKLIATGAAEACIAVNNAVHLINPKLKVNPGHSSNMAIFGQKDD"
     gene            complement(1164..2672)
                     /gene="dacB"
                     /locus_tag="VFD73_14515"
     CDS             complement(1164..2672)
                     /gene="dacB"
                     /locus_tag="VFD73_14515"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HZI75210.1"
                     /translation="MTKARSIALPALLALLPVVPFSPLLAQKDLARRIDARLNVVPFN
                     RQLWGVAVLDDAGHLLYGRNESRMFVPASDTKLVVSAVAAALLSPDWRVKTSVYGGQI
                     VDGVVQGDLVLYGRGDPTIDRRCYAIDTTLAGVCDTDPFLRLRQLVDGLRAKGVRAVA
                     GDIVGDGSYFEPTLVHPNWEGFDLNWWYAAPVSGLGFHDNSVDFEWQPGPALGAPAVI
                     TMTPDLGDVGFENRTVTVAPGGDSDVGDRFFREPGTLQIWAEGTVSLDNPPHTESFAL
                     PDPNLYAARALRQALSEAGIAVRGATRSTTDSLLYARVRATPPLAEVASRPLRDWIFP
                     ILNTSQNWFAEMLLKQLGRQFGKGGSWPDGLEVERRFLIDSVRVDSTQFSLSDGSGLS
                     SSNLISPLAFTQLLRFMRRHPRSQAFMAGLPQAGMAGSLKNRFVGTPLAGRVRAKTGS
                     ISRVYSLTGYIDVGAGKSITFSIEANHHAETSKTMLGVIDSLVVDMARNGKK"
     gene            complement(2665..>3301)
                     /locus_tag="VFD73_14520"
     CDS             complement(2665..>3301)
                     /locus_tag="VFD73_14520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI75211.1"
                     /translation="PATLRLAGAAMLFAAAVGISVGILGAWRPGTWMDRVGAFGSYLG
                     VSFPVYWVGLILILVFAVNLRWLPPSGSGVIVYLVLPALTLGMRSVAFLSRMTRAAMQ
                     DVLQSDFIRTARAKGLWERRVVLSHGLRNALLPVVTVLGLDFGSYLTGSILTETIFSW
                     PGVGRYVLNAIDKRDLPAIQGSILFLSLVFVVVNLLTDILYARVDPRVAFD"
BASE COUNT          723 a          979 c         1040 g          559 t
ORIGIN      
        1 accgggtcgg ccgagtgaat gtgatcggcc tggcgggcga gcgaaagggc agatcaagga
       61 gacgggggta cgagtggcgc gattacatta gggcaactcc cagagtcaac gttcaaggag
      121 aagcagtggc cgagcaggag ctgaaagata tttccattat tggcggcggc cccaccggtc
      181 tgttcgccgc attttacgcg gggatgcggg gagcctcggc ccggattatc gacgcgctgc
      241 cggcgctggg tggccagctg atggccctct acccggagaa atacatcttc gacgttgcgg
      301 gattccccaa ggtattggcc aaggacctcg tgcgggacat ggctgcgcaa gcgttgcagt
      361 tcggcgcgac tacgcacctc ggcgaagtgg taagcgggct ccggcgagtg cagaacggcg
      421 atgccgccca tttcgtactg gagacctcag ggggggagta tccgtccaag accatcatca
      481 tcgcagcggg catcggagca tttgaggccc gcaggctggg catcgagaac gaggacgtgt
      541 atgaggaaaa gggactctac ttcaaggttc tcgaccccaa acagttccag ggcaagcggg
      601 tgttactggt aggcggcggc gactcggcgt tcgattgggc cgtcaatctt caggggattg
      661 ccaaatcggt cctgctgatt caccggcgag agggattccg ggcgcaccag gcgacgatca
      721 accaggttca ggagcttcac caacgcggcg tatgcgagct ccgtaccttc tgggaggtga
      781 aggccttgca cggaaacggc aaggtggagc gagtcaccat cttcaacaac aagacgaagg
      841 aagaagagac gttggagatc gatgcggtga ttccgctgct cgggtttcac tccgatttgg
      901 gtgcaattaa gcagtgggga ctcgacaccg agaaggccga catcaaggtg gaccaactca
      961 tggccaccaa cgtgccgggc atctatgccg cgggagacat caccagttat ctcggcaagc
     1021 tcaagctgat tgctaccggt gccgcggagg cgtgtatcgc ggtgaataac gccgttcacc
     1081 tgatcaaccc gaagctaaag gtcaatccag gccactcgtc caacatggcg atctttgggc
     1141 agaaggatga ttaagcggtg agctcacttc ttaccatttc tcgccatatc cactaccaga
     1201 ctgtcgatca ctcccagcat cgttttactc gtctcggcgt gatggttggc ctcgatcgag
     1261 aaggtgattg attttccggc gccgacatcg atatagccgg tcagggagta cacccgcgag
     1321 atgcttcccg ttttggcccg gacccggcca gccagcggag tgccgacgaa gcggttcttg
     1381 agcgagcccg ccattcccgc ctgcggcaag cccgccatga atgcctgaga gcggggatgg
     1441 cgccgcatga accgcagcag ctgggtaaag gccagcgggc tgatcagatt gctgctcgac
     1501 aacccggagc cgtcgctgag cgagaactga gtcgagtcta cccgaaccga gtcgatcaga
     1561 aagcggcgtt caacctccag tccgtctggc cacgagccgc cttttccaaa ctgcctcccc
     1621 agctgcttca gtagcatttc agcaaaccag ttctgactgg tgttcaggat ggggaagatc
     1681 caatcccgga gcggacgaga agccacttcg gccaacggcg gtgtggcgcg aaccctcgca
     1741 tagaggagag agtcggtcgt ggaacgggta gcgccgcgga ccgcgattcc ggcctcggac
     1801 agcgcctgcc tcagcgcgcg ggcagcgtag aggttcggat cgggcagcgc aaacgactcg
     1861 gtatgcggag ggttatccag tgacaccgtg ccttcggccc agatctgcag cgtgccaggc
     1921 tcacgaaaga accggtcccc cacatcggag tctcctcccg gagccactgt aaccgtgcga
     1981 ttctcgaagc cgacgtcgcc cagatcagga gtcatggtga tgaccgcggg ggcgcccagc
     2041 gccggtcccg gttgccactc gaagtcgacg ctattgtcgt gaaatccaag ccctgagact
     2101 ggcgcggcat accaccaatt caggtcgaac ccttcccagt tgggatgcac cagggtgggc
     2161 tcgaagtagc tgccgtcgcc cacgatgtct ccagccactg cccggacacc cttggctcga
     2221 agcccgtcca ccagttggcg cagccgtaga aaggggtcgg tgtcgcacac gccggccagg
     2281 gtggtgtcga tggcgtagca gcgccgatcg atcgttggat cccctcgccc gtacagcacc
     2341 aggtcgcctt ggaccacccc gtctacgatc tgcccaccgt agacactcgt cttcacccgc
     2401 cagtccggcg aaagcaaggc cgcggcgaca gcgctcacca cgagcttggt atcgctcgcg
     2461 ggaacgaaca tccggctctc gttcctgccg tacaggagat gcccagcgtc atccagcact
     2521 gcgacgcccc agagctgacg gttgaacggc acgacattga gacgagcatc gattctgcgg
     2581 gccagatctt tttgcgccag cagaggagag aagggcacta ctgggagcag ggccaggaga
     2641 gcagggagcg cgatgctcct ggccttagtc aaaggccact ctgggatcca ctcgagcata
     2701 gaggatatca gtgagcaggt tcaccacgac gaacacgagg ctgagaaaaa ggatgctgcc
     2761 ctgtattgcg gggaggtcac gcttatcgat ggcgttcagg acataacgcc cgacaccggg
     2821 ccaggaaaaa atggtctcgg taaggatcga tccagtgaga tagcttccga aatccagacc
     2881 gaggacggtg accacgggca acagggcgtt gcgcagaccg tgagagagga cgacccggcg
     2941 ctcccacagt cccttggcac gtgccgtgcg aatgaaatcg ctttggagga catcctgcat
     3001 ggcagcacgg gtcatccggg agagaaatgc aaccgagcgc atccccagtg tgagcgccgg
     3061 caggaccaaa tagacgatga cacccgaacc ggacggtggc agccatcgga ggttgaccgc
     3121 aaaaactaga atcaagatca gtcctaccca gtagaccggg aacgagacgc cgaggtacga
     3181 gccaaatgct ccgacccggt ccatccaggt acccggccgc caggcgccaa ggattccaac
     3241 gctgatccca acagcggcag cgaacagcat tgccgcgccg gccaaccgca gtgtggcggg
     3301 g
//
LOCUS       DASRPQ010001265         1579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1084811, whole genome shotgun sequence.
ACCESSION   DASRPQ010001265 DASRPQ010000000
VERSION     DASRPQ010001265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1084811"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..551)
                     /locus_tag="VFD73_14525"
     CDS             complement(6..551)
                     /locus_tag="VFD73_14525"
                     /inference="COORDINATES: protein motif:HMM:NF020376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIRAN domain-containing protein"
                     /protein_id="HZI75212.1"
                     /translation="MSAQVASIPVAAPPATTIRATSASIDDDPSDVLRRVQSEMVSAN
                     LDLPLDEQVEVVGEQYHPKEIRKLFRECSLPITTAGNVLEDEVCYLVPEPWNPHDPNA
                     VAVMVRSYQVGHLPAELAKRYHPRLIGYAQQRQLVTGVARVWSKLESGAMVRARVTIA
                     VPEVAVLLAQRRAQLALPVAR"
     gene            complement(801..1031)
                     /locus_tag="VFD73_14530"
     CDS             complement(801..1031)
                     /locus_tag="VFD73_14530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75213.1"
                     /translation="MSETADDDEDLEHPRFIRMLAEDTFDGQERVFTRAAYDLQVQAT
                     AHSARCGHPGYVPDDAGDHCDCYSLRSGQILY"
     gene            1065..1397
                     /locus_tag="VFD73_14535"
     CDS             1065..1397
                     /locus_tag="VFD73_14535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75214.1"
                     /translation="MADSLTNPKLLGDGMSPTALTWAFASWVAKSSGYMLTSANMIMV
                     SGHGRGFSVQKNHALISVLAGQNRTITLSYSNFGFKLPERLELRDELPRNPLGKILKR
                     ELRDELRT"
BASE COUNT          295 a          474 c          517 g          293 t
ORIGIN      
        1 acatgtcagc gagccacagg tagggcaagc tgtgcacgtc tttgggctaa caggaccgcg
       61 acctcaggca cggcgatggt cacgcgggcc cgcaccatcg cacctgactc cagcttgctc
      121 cagacccgag ccaccccggt caccagctgc cgctgctggg cgtacccgat gagtcgcggg
      181 tgataacgct tcgcaagctc cgcgggaagg tgaccgactt gataactgcg gaccattaca
      241 gccacggcgt tcgggtcgtg agggttccac ggctccggca ccaggtagca cacctcgtct
      301 tcaagcacgt ttcctgccgt tgtaatggga aggctgcatt cacgaaacag tttgcgtatc
      361 tcttttgggt ggtactgctc gcccacaacc tccacttgct catcgagcgg caagtcaagg
      421 ttggccgaca ccatctcgct ctggacgcgc cggagaacgt cactggggtc gtcgtctatc
      481 gacgccgacg tagcgcgtat agtcgtcgct gggggcgcgg cgacggggat gctcgcgact
      541 tgtgctgaca cgtgctgtgc tggggagcca ggcgcgctag tgacggcgcc atttggaggg
      601 aatggggcgc agtgatcggt ccacgcgcga ccgtcccacc agcgcaagcg cgaggggtca
      661 gtggggtcga tgaaccaccg ggctggcggc gtcttcttct tgccccagag cgtcatctag
      721 ccatgatgca tccggcactt aggagccgtc ctgcagttca cgaatgcggt ggagtacatc
      781 tagggcaaat acggggcaaa tcagtacaag atctgcccac tccgcaatga gtaacaatcg
      841 caatgatcac cggcgtcgtc ggggacgtac ccggggtggc cgcagcgcgc ggagtgggcg
      901 gtggcctgga cctgaaggtc gtaggcggcg cgggtaaaca cgcgctcctg accgtcaaag
      961 gtgtcctcgg ccagcatgcg gatgaagcgg ggatgctcca ggtcctcatc gtcatcggcg
     1021 gtctcgctca tcggctgcag ccgcggcggt tgcagagatg cctcgtggca gactccctca
     1081 ctaacccgaa gttacttggc gatggcatgt cacctacggc gctgacctgg gccttcgcga
     1141 gttgggtggc taagtcttct ggctacatgc tgaccagcgc aaacatgatc atggtatctg
     1201 gtcatggtcg cggattttct gtacagaaaa accatgctct gatcagtgtt ctcgcaggtc
     1261 agaatagaac tattacgctg agttacagta acttcgggtt caagctgccg gagcggctcg
     1321 agctccggga cgaactgccg cgcaatccgc tcggcaagat cctcaagcgc gaattgcgcg
     1381 acgaattgcg gacctgagcc cggccgccgc tagcagtggg cggcgggcgg ggccacgtcc
     1441 agggtggggt tgcggtcgaa gaagccggtc ggcttgagca cgaagccgca gcgggctacc
     1501 ggcatgaccg gccagtcctc cgggcgcggc acatgcgtgg ggccgaacgt gtgccagacc
     1561 acgatgtcct cgccgtcga
//
LOCUS       DASRPQ010001266         1216 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1409643, whole genome shotgun sequence.
ACCESSION   DASRPQ010001266 DASRPQ010000000
VERSION     DASRPQ010001266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1216
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1409643"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..384)
                     /locus_tag="VFD73_14540"
     CDS             complement(<1..384)
                     /locus_tag="VFD73_14540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75215.1"
                     /translation="MQEAAVVLSVLRERGRKGLPLTQLYRQMFNKDLYLLAYGNIYSN
                     QGAMTPGASEETADGMSGQKIDRITELMRYERYRFAPARRIYIPKKNGRLRPLGLPSW
                     SDKLVGEVVRLLLEAYYEPQFSDYSH"
     gene            complement(999..>1216)
                     /locus_tag="VFD73_14545"
     CDS             complement(999..>1216)
                     /locus_tag="VFD73_14545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75216.1"
                     /translation="PFGIMPVLDAERGGFAAPRPWPGAGTGVRRESQVVGVLAGFPVG
                     DPAPEPFELVALVVQEGSLGDLAGSYP"
BASE COUNT          203 a          431 c          338 g          244 t
ORIGIN      
        1 gtgggaatag tctgagaact gcggttcata gtacgcctcc aagagcaggc gcactacctc
       61 gccgacgagc ttatcagacc acgacggcaa tccgagcggc ctcagcctcc cgttcttttt
      121 cgggatataa atacggcggg ccggggcgaa ccggtaccgc tcgtatcgca tcagctcggt
      181 gatccggtcg atcttctgcc cggacatgcc gtcggcggtt tcctcgctgg cacccggcgt
      241 catcgccccc tggttggagt agatgttgcc gtatgccagc aagtacagat ctttgttgaa
      301 catctgccgg tacagctgcg tgagcggcag gcccttcctg ccacgctcgc ggagaacgct
      361 cagtaccact gcggcttcct gcatttcgca tgcctcctgg cctggtgcta ttcatcgcct
      421 gtgccccttc gccctgtgga ccggctttcc cggtctccag attggccgga cgtcaccccg
      481 gcgactacta cgggcactcc gtcgccatag gactcgcgtc ccttaggcga tcccacgttc
      541 acaactgcca tacgtactag cgcgacttag gcgtcccgtc cgcctccttc aatgccctta
      601 ccgggcatcg ctcctgcgcc ccggaggatt accgcaggga tctgcacacc ccgcagcagg
      661 ggccggtgcc ggtgcatgcg tctttccggc aggttcacgc ctttaaacct tctggagact
      721 gggattcagg caatccggct ttcgccatat cgcgcggatc tcccggcacg ccgccccgta
      781 cgcctcggca gcggccgccg gtttcctggc atgctattgt ccccttagac cctttcggat
      841 caagggtcag ccattagatc caaagacacc tcctccagtc tctgcccgct acgcgggcta
      901 tatagcagtg cgcctcgtgg cgcacgcaga tcggcggctc cgcgtgcgtt ctccctgacc
      961 ctctgtgtca ctcagcgtga tggcggcccg ctcgaaggct acgggtacga cccggccaag
     1021 tcacccaagc tcccttcctg aactaccagc gcaacgagct cgaacggttc gggcgctgga
     1081 tcaccgactg gaaatcccgc gagtacacct accacctgtg attcccgccg gacacccgta
     1141 cctgcccctg gccacgggcg gggggcggca aagccacccc gttcggcatc cagaacgggc
     1201 atgatcccga acgggt
//
LOCUS       DASRPQ010001267         2120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2965842, whole genome shotgun sequence.
ACCESSION   DASRPQ010001267 DASRPQ010000000
VERSION     DASRPQ010001267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2120
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2965842"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /locus_tag="VFD73_14550"
     CDS             complement(<1..392)
                     /locus_tag="VFD73_14550"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HZI75217.1"
                     /translation="MIEISDQELDATLNPAQREAVEHVQGPLLVLAGAGSGKTRVLTM
                     RIAALIDRHGVPPQRIFAVTFTNKAAGEMKERIGRLLQRDPSGLWIGTFHALSARLLR
                     REAELLGFTRRFTIYDEDDRLSLIRRLM"
     gene            complement(389..1552)
                     /locus_tag="VFD73_14555"
     CDS             complement(389..1552)
                     /locus_tag="VFD73_14555"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HZI75218.1"
                     /translation="MRSDRLQRLAPTIVAGLVALLAGLSLGTGVLIFRHFQADATATS
                     RLYSGVFGGLNNPRPGAEAEALLRLGEQVRALGLPLVVTDGTGKVTAAANLPFQAALD
                     DPRVKLYANRLDRQNPPISDPAVGTVHYGPLPAQRNLTGLAVLQGLTIAVMVAVAVFA
                     YRSAMSAQRDRLWVAMAREAAHQMGTPLTSLQGWIERVRSHATPPPGLADHLSADAER
                     LDRVAQRFERIGNPAKREPIGLGALADRVAGYFRPRLPRHANMIDLRVEAAGAGPTVL
                     GDTVLLEWALESLVKNAIDALQGRPGTIILRVAAEDNMGVIRVIDDGPGVAKELRRTL
                     FEPGITTKRGGWGIGLALSRRVIEDAHQGALLLEQAERETCFVLRVPLAGRET"
     gene            complement(1545..>2120)
                     /locus_tag="VFD73_14560"
     CDS             complement(1545..>2120)
                     /locus_tag="VFD73_14560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003218092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl--tRNA ligase-related protein"
                     /protein_id="HZI75219.1"
                     /translation="LTNIHREDILEARDLPATYVAWTPCFRREAFSHGKDTRGLIRVH
                     QFDKVELVRIVSPESSAEEHEKMTSHAETVLQRLELPYRVIELAAGDTGFASARTYDI
                     EVWAAGVGAWLEVSSSSTFTDFQARRANIRYRPAPKAKPELVHTLNASGVAFPRTIIA
                     LLENNQAADGSVRIPEALVPYMGLERLTPRA"
BASE COUNT          384 a          713 c          648 g          375 t
ORIGIN      
        1 tccatcagcc gccggatcag gctgagccga tcgtcctcat cgtagatggt aaagcgacgg
       61 gtgaagccga gcagctcggc ttcacgccgg agcagtctgg cagagagggc gtggaaggtg
      121 ccgatccaga gcccggaggg gtctcgctgc agcagccgtc cgatccgctc cttcatttcg
      181 cccgcggcct tgttggtgaa tgtcaccgcg aagatccgct gcggcggcac accatggcgg
      241 tcgatgagcg ctgcgatccg catggtgagc actcgggtct tccccgaccc cgcgccggcc
      301 agcaccagga gcggcccctg gacgtgttcg accgcctccc gctgggcggg gttcagcgtt
      361 gcgtccagtt cctgatccga gatttcgatc atgtctcccg tcccgccagc ggaacccgca
      421 gcacaaagca ggtttcccgc tctgcctgct ccaacagcag cgcaccctgg tgtgcatctt
      481 cgatcacgcg gcgcgacagt gccagaccga tgccccatcc gccacgcttg gtggtgattc
      541 ccggctcgaa cagagtacgg cgtagctcct ttgccacgcc cggtccatca tcgatgaccc
      601 ggatcactcc catattgtcc tcggcagcta cccgcaggat aatcgtaccc ggccgcccct
      661 gcagcgcatc aatcgcattc ttcaccaatg attccaacgc ccattccagc aagactgtat
      721 cgcccagcac agtaggacca gcacccgcgg cctccacccg gaggtcgatc atgttggcat
      781 gccgcggcaa ccgggggcgg aaatatcccg ccacccgatc cgccagggcg ccgaggccga
      841 ttggttcccg ctttgccggg ttcccgatgc gttcgaatcg ttgcgcaacc ctatcgagcc
      901 gctcggcatc tgccgagagg tggtcggcca atccgggggg cggcgtagcg tgcgagcgca
      961 cccgctcgat ccagccttgc agactggtca gcggcgttcc catctggtga gcggcctctc
     1021 ttgccatggc cacccacagc cggtcccgtt gcgccgacat tgcgctgcga tacgcgaaaa
     1081 ccgccaccgc taccatcacc gcgatggtaa gaccctgcag gacggcgaga ccggtcaaat
     1141 ttctctgggc cggcagcggc ccataatgaa cggtccccac cgcggggtcg ctgatcggcg
     1201 gattttgtcg gtccaaccga ttggcgtaca gcttcacccg cggatcgtcg agagcagcct
     1261 ggaacggcag attggctgcg gcggtcacct ttccagtacc gtcggtaacg accaggggaa
     1321 gccccagcgc gcggacctgc tcacccaagc gcagcaacgc ctcggcctcg gcgccagggc
     1381 gagggttgtt gagcccgccg aacacgccgg aatacagtct gctggtggca gtcgcgtcag
     1441 cttgaaaatg acgaaagatg agaacgccgg tgccaaggct cagtcccgcc agcaatgcga
     1501 cgaggcccgc gacgatcgta ggcgcgagac gctggagccg atcgctacgc acgtggcgtc
     1561 aagcgctcga gtcccatgta cgggaccagc gcctctggta tccgtactga gccatcggct
     1621 gcttggttgt tctccagaag tgcgatgatt gtgcggggga aagccacgcc tgacgcattc
     1681 agggtatgga ccagctccgg ttttgctttg ggagccggcc ggtaccggat attcgcccgc
     1741 cgagcctgaa aatccgtgaa ggtgctcgag ctggagacct cgagccaggc ccctacgccc
     1801 gcggcccaga cctcgatgtc gtacgtacgc gcgctggcaa agccggtatc acccgcggca
     1861 agctcgatca ctcgataggg caattcgagt ctctggagga cggtctccgc atgactcgtc
     1921 attttctcgt gctcctccgc ggagctttcg ggcgagacga tccgaaccag ctcgacctta
     1981 tcgaactgat gcacccggat cagcccgcga gtgtccttcc catgggagaa ggcctcccgc
     2041 cgaaaacacg gcgtccaggc cacgtaggtg gcgggtaagt ccctggcctc gagaatatcc
     2101 tcgcgatgaa tgttggtgag
//
LOCUS       DASRPQ010001268         1497 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2339479, whole genome shotgun sequence.
ACCESSION   DASRPQ010001268 DASRPQ010000000
VERSION     DASRPQ010001268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1497)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1497)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1497
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2339479"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..863)
                     /locus_tag="VFD73_14565"
     CDS             complement(<1..863)
                     /locus_tag="VFD73_14565"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZI75220.1"
                     /translation="MGSARVVVLGGGLSGVAAAYTLARAGVRDITLLEAGGTLGGLAG
                     SFEREGHYYPLGYHHILHRDRTLLYFLGVIGALPRVVWRRIRMLFHLGGEAYDLATGS
                     GFMRFPMSLADKARFVRLMLKAFTQGDWSSWQDRSAAELVDRYGSVGVRQALFERLTR
                     LKFELPCDEVSGAWLGARLHFREGSAPLGYIAHANWTKVLCDGVTQLLQESGVQVRLR
                     TKVARLHTVHQQVMEAELESGERIPGDRFISTVPTEVYLSLVPVEATPYLASIRYTAL
                     ISVVSATRQVV"
     gene            978..>1497
                     /locus_tag="VFD73_14570"
     CDS             978..>1497
                     /locus_tag="VFD73_14570"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HZI75221.1"
                     /translation="MLSALLVFGLAVLLRFVLAGERGLWADELFSLAMATGHSLEHPA
                     AVADSTQGDFVEHREAQAPAAYNRYLQHEHPPAGPRRVVRAVLLSDTSPPLYYLVLNL
                     WTRGVGTSDRSLRLFSVFWALAAFPLIWSLGARIGGPPAAIAAGLLYALAPVSLYYAV
                     EGRMYSMLWFLAT"
BASE COUNT          261 a          506 c          450 g          280 t
ORIGIN      
        1 tgtaccacct gccgcgtggc ggacaccacg gaaatcagtg cggtataccg gatgctggcc
       61 agatagggcg tggcctctac cgggaccagt gagaggtaca cttccgttgg cacagtgctg
      121 atgaaacggt cgccgggaat gcgctcgccg ctctccaatt ccgcttccat cacctgttgg
      181 tgtacggtgt gcaaccgggc aaccttggtt cgaagccgga cctgcacgcc ggattcctgg
      241 agcaactggg tcactccatc gcagaggacc ttggtccagt tggcgtgagc gatgtagccc
      301 agcggagccg acccctcccg aaaatgcaat cgcgcaccca gccaggcgcc gctcacttcg
      361 tcacagggca gctcaaattt gagccgggtg agtcgctcga agagggcctg gcgcacgccg
      421 acgctaccat accgatccac cagctcagcg gcgctgcgat cctgccagct ggaccaatcg
      481 ccctgagtga aagccttgag catcagacgt acgaatcgcg ccttgtcagc caggctcatg
      541 ggaaaccgca tgaacccgct gccagtcgcc aggtcgtacg cctccccgcc aaggtggaag
      601 agcatgcgaa tccggcgcca caccacgcga ggcaaggcgc cgatcactcc caggaagtag
      661 agcagtgtcc ggtcccggtg aagaatgtgg tgatagccga gggggtaata gtgaccctcg
      721 cgctcgaaac tcccagccag accaccaagg gtaccgcccg cctcgagcag agtgatgtcc
      781 cggactccgg cacgcgccag agtgtacgct gccgcaaccc cggaaaggcc acctccgagc
      841 accacgacac gggcactccc catcgctagc tccctgcctg ccatgtctgg tcgggacctt
      901 ccgaggttcc tattttcccg agcaatgatt tctccagttg ctacggagcc ggtcgtgtga
      961 ggtctcgctc gagacccatg ctgtcggctc tgcttgtgtt cggcctggcg gtgctgctgc
     1021 gattcgtatt ggccggcgaa cgaggcctct gggccgacga gctgttctcg ctggccatgg
     1081 ccaccgggca tagtctcgag catcccgccg cggtggccga ctcgacccag ggtgatttcg
     1141 tcgagcatcg ggaggctcag gctccggccg catacaatcg gtacctgcag catgagcatc
     1201 cgccggccgg tccgcgccgc gtcgttcgcg ctgtgctact gtccgatacg agccccccac
     1261 tttactacct tgtgctgaac ctgtggactc gcggagtcgg tacctccgat cgctcgcttc
     1321 gcctcttttc agtcttctgg gcgctcgccg ccttcccact gatctggtcg ctcggcgcca
     1381 ggatcggcgg cccaccggcg gccatcgcgg ccgggctctt gtacgcgctg gcacccgtca
     1441 gcctctacta cgccgtcgaa ggccggatgt actcgatgct atggttttta gcgacgg
//
LOCUS       DASRPQ010001269         1071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_775630, whole genome shotgun sequence.
ACCESSION   DASRPQ010001269 DASRPQ010000000
VERSION     DASRPQ010001269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_775630"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(73..894)
                     /locus_tag="VFD73_14575"
     CDS             complement(73..894)
                     /locus_tag="VFD73_14575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75222.1"
                     /translation="MTRTPFPPAHTTAVSPYRRARHRLRTHVSERPLGYLAFARHKYT
                     GHNVEVIGPDTELVIDGFTRSATTFAVYAFQLSQDRPIRLAHHLHAPAQLIEAARRGI
                     PAVLLIRKPQGAILSQLIREPDVSLRGALFAYSRFYEHLLPYRKSFVIGEFKQVTHEF
                     GAVIRQLNARFGTHFAEFTPSDVNVRECFELCRLRETMSPALLGFESGLVTRDQVRSE
                     FQSARGAVSQEEPEAWVPSAQRERAKEALRDQWLHPSLAHLRDRAELVYQQFSAG"
     gene            complement(891..>1071)
                     /locus_tag="VFD73_14580"
     CDS             complement(891..>1071)
                     /locus_tag="VFD73_14580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75223.1"
                     /translation="ITGIDDETWRRPVGRGSVIAYYAKGSQLCLAEWPEGRGAMAAGS
                     ADGPGDQAPRAKAPG"
BASE COUNT          193 a          319 c          354 g          205 t
ORIGIN      
        1 cctccggtcg acaattgcgg gccaagcctg ctcactcgcg cgattgcgga cgtcaggccg
       61 gccagggcat ggctacccgg ccgagaattg ctgatacacc agttcagctc tgtccctgag
      121 gtgggcaagg gaagggtgta gccactggtc acgtagcgcc tccttggccc gctcgcgctg
      181 cgcggacggg acccacgctt ccggttcttc ttgcgatacg gcacctcggg ctgattggaa
      241 ctcgctgcga acctgatcac gggtgaccag tccggactcg aagcccagca aagccgggga
      301 catggtttcg cggagcctgc acagctcgaa gcactcgcgc acgtttacgt cactgggtgt
      361 gaactctgcg aaatgagtgc cgaaacgtgc gttgagttgc cggatcactg ctccgaactc
      421 atgtgtgacc tgcttgaatt cgccgatcac aaagctcttc cgataaggca gcaggtgctc
      481 atagaagcgg gaatacgcga agagggcgcc ccggagtgag acgtcaggct cccgaataag
      541 ctgggaaagt atggctccct gtggtttgcg gatgagtagc acggccggga tacctcgccg
      601 tgctgcctcg atgagctgcg cgggagcgtg cagatgatga gctagccgga ttggcctgtc
      661 ttgggaaagc tgaaacgcgt atacggcgaa tgtggtcgcc gaccgtgtga atccgtcaat
      721 cactagttcc gtatcggggc cgataacctc gacattgtgc ccggtgtact tatggcgcgc
      781 gaaggcaagg tacccaagcg gacgctcgga aacgtgggtg cgcaagcggt gccgggcacg
      841 gcggtatggt gagacggcag tggtgtgcgc tggcgggaag ggtgtcctgg tcatcccggt
      901 gctttcgcgc gaggtgcctg atcgcctggt ccgtccgccg agcccgccgc catggcgcct
      961 cgcccttcgg gccattctgc caggcaaagc tggctgccct tggcgtagta cgctattacc
     1021 gacccgcgcc ccaccggacg gcgccacgtc tcatcgtcga tgccggtgat c
//
LOCUS       DASRPQ010001270         1043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_148938, whole genome shotgun sequence.
ACCESSION   DASRPQ010001270 DASRPQ010000000
VERSION     DASRPQ010001270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148938"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..417
                     /locus_tag="VFD73_14585"
     CDS             <1..417
                     /locus_tag="VFD73_14585"
                     /inference="COORDINATES: protein motif:HMM:NF018434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide disphospho-sugar-binding
                     domain-containing protein"
                     /protein_id="HZI75224.1"
                     /translation="ALVCAAGTDFSASPQFEHVKVVGAVNYAATLPACRAVVHHGGAG
                     TTAAGLRAGVPTLILSTDLDQTLWGARVKRLKVGTARRFSTTTRQSLVADLRTILAPQ
                     YAARASAIATRMTKPTESVAAVADLLENFARLRCVR"
BASE COUNT          180 a          332 c          325 g          206 t
ORIGIN      
        1 gcgttggtat gcgccgccgg gactgacttc agtgcctctc cccagttcga acacgtcaag
       61 gtagtgggcg ccgtcaatta cgcggccacc cttcccgcct gccgtgcggt ggtgcaccac
      121 ggtggtgcgg gcaccacagc agcgggcctg cgcgctggtg tccccacttt gattctgtcg
      181 accgaccttg atcagaccct ttggggcgct cgggtcaaac gtttgaaagt gggcaccgcc
      241 cggcgctttt cgaccactac ccgccaatca cttgtcgcgg acctgcgcac tatcctggcc
      301 ccgcagtatg cggcgcgggc cagcgcgatc gccacaagga tgaccaaacc caccgaaagc
      361 gttgctgccg tggccgatct tttggaaaac ttcgcccgcc tccggtgtgt tcgctgatca
      421 ctggcccgcc gcaggccacg agcaatcgct cgatacctct tcatcagccc cggtaaagga
      481 gcgatccggg tatagcacga taagcgtcgt gaacctgtga accctctgag aattcacgcc
      541 aagtcggttt ctgatggctg aatcccggtc gatgctgtgc gttgggtggg cgctgcacga
      601 ttcgggcagt gcagcaagta atcggtcttc agtgaggggg gcttgcgatg acggagggcg
      661 acggcaggaa ggcacagact gaccgcctgt tctcggcgaa ctggttgggc gggcttgggt
      721 accaagccat taatcactct caccatgcaa gggagcagct gcgacagcgg taccgccgag
      781 tgggagacag gtttgcgcgc cagctctcgg aggttttcga ccggtcgttt tggatccctt
      841 aggggccacc accttcagcg accgacggca cctgcggcag ctggcagtcg agcagcggct
      901 ctctgccgcc ggcagcctca cagcatgtag ccatgctggt tctcgcgctg acggtgctga
      961 actcgaccga ttggcatccc tactcaggtc cccggcggat tcgctcagct acgagagtcg
     1021 cacgctgcat gctctggctc ggc
//
LOCUS       DASRPQ010001271         2678 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3305582, whole genome shotgun sequence.
ACCESSION   DASRPQ010001271 DASRPQ010000000
VERSION     DASRPQ010001271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3305582"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            196..564
                     /locus_tag="VFD73_14590"
     CDS             196..564
                     /locus_tag="VFD73_14590"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI75225.1"
                     /translation="MTKGKRRRRVLIVEDEPALRLSYERAFNPRYDLIFASTGAEALE
                     QLEHHKPDVAVLDMRLPDTDGVDLLRRIRQSQPELPVIITTAYMSIEPQLKVLDLPHS
                     GYIVKPFRLDELGARIDAIS"
     gene            551..1270
                     /gene="ccmA"
                     /locus_tag="VFD73_14595"
     CDS             551..1270
                     /gene="ccmA"
                     /locus_tag="VFD73_14595"
                     /EC_number="7.6.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015439 - ABC-type heme transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC exporter ATP-binding protein CcmA"
                     /protein_id="HZI75226.1"
                     /translation="MPSHDAGILLDARGLYRSFGRTRILRGVDLTLRRGEVLAVLGPN
                     GAGKTTLLRLLAGLMRPTAGEIRLLGERVSGRSDPRRSVVGFVSHQSLLYDDLTLEEN
                     LAFAARLHGVERPREAAARALAAAGLADRRTELPRRLSRGLLQRAAIARSLIHSPQVL
                     LLDEPFTGLDAAAADRFRNTVSDALPSGLAAVVVTHYPGEIWDLATHVGVLIEGRWAV
                     YQTRSGDLDALEDRYRQLTRA"
     gene            1263..1943
                     /locus_tag="VFD73_14600"
     CDS             1263..1943
                     /locus_tag="VFD73_14600"
                     /inference="COORDINATES: protein motif:HMM:NF015344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HZI75227.1"
                     /translation="MPSSIGLALAIAAKDIQAELRSRTALLSALVFAALVLVVFNFAR
                     DPTAVAGSVLAPSVLWVTFALAAIVAMNRGFTLERENGALDGLLLAPIPREALYAGKL
                     LANLAFVGAVELVTLPLFILFFNVSLWSALPGVLLVMGLATIGFVAVGTIFSAMAVRT
                     RFAELMLPVLLLPFMVPPLIGAVQLTSRLLASRPLNEMWGWLRLLTLYDIVFVTLCTL
                     AFPAVVDE"
     gene            1940..2650
                     /gene="ccsA"
                     /locus_tag="VFD73_14605"
     CDS             1940..2650
                     /gene="ccsA"
                     /locus_tag="VFD73_14605"
                     /inference="COORDINATES: protein motif:HMM:NF013725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HZI75228.1"
                     /translation="MNQQPKPLSRSRQLVRRGYRLAALGFVGLAIVYVLALVYTPEEA
                     RQGLAQKIFYLHVPAAWSALLSFTLVGIASATYLWLQDPRLDRFAAASAEVGVVFSAV
                     MLTTGPIWAKPIWGTWWTWDARLTLTLFLFFLFIGYLALRAAVHDPAERARFSAVVGI
                     LGMLLVPFIHLSVYLFRTLHPQPVVLKPSAPSLPPEMLRTLLISTVVFTLLYLGLVTT
                     RYGLALEQELREEAADGA"
BASE COUNT          415 a          872 c          824 g          567 t
ORIGIN      
        1 gccagctggt gattctccgg aacctgcggg aagaaatacg cttcctcctc gtgctcacca
       61 agttggacga tctcttccag ctcgaatcag cagtagggtg atcggcgggt agacggaccc
      121 cccacgatag gttagagtac cccaaccgtt cttcctctct ctcggccgcg cgaaccgggc
      181 ccaggggtac tctgaatgac caagggaaag cgccgccggc gcgtcttgat agtcgaggac
      241 gagccggccc ttcgcctgag ctatgagcga gccttcaatc ctcggtatga tctgatcttt
      301 gcctcgaccg gcgcggaggc actggagcaa ctggagcacc ataagcctga cgtagcggtg
      361 ctggacatgc ggcttcccga caccgacggg gtcgacctgc tccgccgcat ccgccagagc
      421 caacccgagc tccccgtcat cattaccacc gcctatatga gcatcgagcc tcaactcaag
      481 gttctcgatc ttccccactc cggctatatc gtaaaaccgt tccgcctcga cgagctcggc
      541 gcgcggatcg atgccatctc atgacgccgg catcctcctc gacgctcgcg gattgtaccg
      601 gtcctttgga cggacccgca ttcttcgggg cgtagatctc acccttcgtc ggggcgaggt
      661 cctggcagtg ctgggtccca acggtgcagg gaaaactacc ttgctccgtc tgctggccgg
      721 actcatgcga cccaccgccg gcgagatccg gctgctcggc gagcgcgtca gcggccgatc
      781 ggacccgcgg cggagcgtcg tcgggttcgt atcgcaccag tcgctgctct atgacgacct
      841 gaccctggaa gaaaacctgg cgttcgcggc gagacttcac ggagtggagc gccctcgcga
      901 ggccgccgct cgcgcgctgg ctgccgccgg tctggccgac cgccggacgg agctgcctcg
      961 ccggctgagt cgcggattgt tacagcgggc ggccatcgcc cgttccctga tccactctcc
     1021 gcaggtgctt ctcctggatg agccgttcac cggactggat gccgcggcgg cggaccgctt
     1081 ccgcaacacg gtaagcgacg ctctcccgag cggacttgcc gcagtggtcg tcacccacta
     1141 ccccggcgaa atctgggacc tggccactca cgtcggggtc ttgattgagg ggcgctgggc
     1201 ggtgtaccag acgcggagcg gcgacctgga cgcgctcgag gatcgctatc ggcagctgac
     1261 tcgtgcctag ctccatcgga cttgcgctgg cgattgctgc caaggacatc caggccgagc
     1321 tgcggagccg gactgcactc ctatcggcac tggtgtttgc agcactggtc cttgtggtct
     1381 tcaactttgc ccgggatccc accgcagtgg ccggatcggt gctcgccccc agcgtgctgt
     1441 gggtgacttt tgccctggcc gcaatcgtcg cgatgaatcg cgggtttact ctcgaacggg
     1501 agaacggcgc gctcgatggg ttgctgcttg ccccaattcc ccgggaagca ctctatgccg
     1561 gtaaactgct cgccaacctt gcctttgtcg gcgcagtaga gctggtgact ctccccctct
     1621 ttatcttgtt ctttaatgtg agcctgtgga gcgcacttcc tggggtgctg ctggtgatgg
     1681 ggctggccac catcggattt gtcgccgtgg gtaccatctt cagcgccatg gcggtgcgca
     1741 cccgttttgc ggagctgatg ttaccggttc tgcttctccc ttttatggta ccgccgctga
     1801 tcggagcggt tcagctcacc agtcggctgc tggcgagtcg gccattgaat gaaatgtggg
     1861 gctggctcag gttgctcacc ctctacgata tcgtattcgt gacactctgt accctggcgt
     1921 ttcctgcggt ggtcgacgaa tgaaccagca gccgaaacca ctcagtcggt cgcgccaact
     1981 ggtgcggcgc ggataccggc tcgcagccct gggtttcgtc gggctcgcca tcgtatatgt
     2041 cctggctttg gtctacacgc cggaggaagc ccggcagggg ctggcacaaa aaattttcta
     2101 tctgcatgtg ccggccgcct ggagcgcgct gctttccttc accctggtag gaatcgccag
     2161 cgcgacctat ctctggctgc aggacccgag gctggatcgc tttgccgcag catcggccga
     2221 agtgggcgtg gtgttcagcg cggtgatgct gacgaccgga ccgatctggg ccaagccgat
     2281 ctggggtacc tggtggacct gggacgctcg tctgacgctg accctgtttc tcttcttcct
     2341 gttcatcggc tatctggcgc ttcgcgcagc ggtgcacgac cccgcggaac gggcccgctt
     2401 cagcgccgtc gtgggcatcc tcggcatgct gctggtgccc ttcattcatc tgagtgtcta
     2461 tttgttccgc accctgcatc cccagccggt ggtgctcaaa cccagcgcgc cttcgctgcc
     2521 accggagatg ctccgcactc tcctgatctc cacggtggtg ttcacgctac tgtatctggg
     2581 tctggtcacg acccgctatg ggctggctct agagcaggag cttcgggaag aagcggcgga
     2641 tggtgcttga gccgccccga aacggcgggt acctcttg
//
LOCUS       DASRPQ010001272         1830 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1085381, whole genome shotgun sequence.
ACCESSION   DASRPQ010001272 DASRPQ010000000
VERSION     DASRPQ010001272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1830
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1085381"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(68..1464)
                     /locus_tag="VFD73_14610"
     CDS             complement(join(68..1137,1137..1464))
                     /locus_tag="VFD73_14610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611236.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZI75229.1"
                     /translation="MPNPEVPEKPKRRQFTAEYKRSIVAQAEACRDDGAIGGLLRREG
                     LYSSHLTTWRRQKEQGEFDALTPKKRGRKSTANPLTEENQRLRKENARLSRRLEQAEL
                     IIDVQKKGIGPAGDLAAGGQERRGELMTAAHQLGQTVGRAAACRALNVPRASLYRHLR
                     PSEPATPAVPRPSPPRALAPAEQQRILDVLHSERFQDKAPNEVFAALLDEGTYLCSVR
                     TMYRILEQTGEVRERRAQLRHPNYQKPQLLATSSNQVWSWDITKLLGPVKWTYFYLYV
                     ILDIFSRYVVGWMVAERESAELAKRLIGETCRKQNIAPDQLTIHADRGTSMTSKPVAL
                     LLADLGVAKTHSRPHVSDDNPFSESQFKTLKYRPEFPERFGSIQDARAFCQSFFPWYN
                     TEHHHSGIGLLTPEVLHYGRADEVIAQRQVILSQAFQRNPERFVRAHPRPPVRPTAVW
                     INPPSVPAASEQEQH"
     gene            complement(1597..>1830)
                     /locus_tag="VFD73_14615"
     CDS             complement(1597..>1830)
                     /locus_tag="VFD73_14615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75230.1"
                     /translation="KKRPRFLYRHLVRRGASSGQAAGVAYYRQGVWSRSNRRGMTKAY
                     PNDWFHGQIGSLYDRWRVANPLPQVPSQLSLAW"
BASE COUNT          299 a          532 c          640 g          359 t
ORIGIN      
        1 aacgaagatc gactggaaga agcggcgcgg aatttgtcaa tgactttgag acacctgccc
       61 gcataaatta gtgttgctcc tgttcgctcg ccgccgggac gctcggcggg ttaatccata
      121 cggcggtagg ccgcactggt gggcggggat gcgcccgaac gaagcgttcg ggattccgtt
      181 ggaaagcctg gctcagaatg acctggcgtt gggcgatgac ctcgtctgcc cggccgtagt
      241 ggagcacctc gggcgtgagc aggccgatac cgctgtgatg gtgctcggtg ttgtaccaag
      301 ggaagaagct ctggcagaag gcgcgggcgt cctggatcga gccgaagcgt tcggggaact
      361 ccggccggta tttcagggtt ttgaactggc tttccgagaa cgggttgtca tcggagacat
      421 gcggccggct gtgggtcttg gcaacaccca ggtcggccaa cagcaaggcg acgggcttgg
      481 aggtcatcga ggtgccgcga tcggcgtgga tggtgagctg gtcgggggcg atgttctgct
      541 tgcgacaggt ctcgccgatg agccgcttgg ccaactcggc gctttcgcgt tcggcgacca
      601 tccagccgac gacgtaacgg ctaaagatgt ccaggatcac gtagagatag aagtaggtcc
      661 acttgaccgg cccgagcagt ttggtgatgt cccagctcca gacctggttg gagctggtgg
      721 ccagcagttg cggtttctgg tagttgggat gacggagttg agcgcggcgc tcgcggacct
      781 cgccggtctg ctccaggatg cgatacatgg tgcggaccga gcacaggtag gttccctcgt
      841 ccagcaaggc ggcgaagacc tcgttcgggg ccttgtcctg gaagcgctcg gaatgcagca
      901 cgtcgaggat cctctgctgt tcggcgggcg ccagggcgcg gggaggactc gggcgcggga
      961 ccgcgggagt agccggctcg ctggggcgga ggtggcgata gagcgaagcc cgcggcacgt
     1021 tgagcgcgcg gcaggcggcc gcccggccca ccgtttggcc gagctggtgg gcggcagtca
     1081 tgagttctcc tcgccgctct tgacctccgg cagcgagatc cccagcaggg ccgatacttt
     1141 tttttgcacg tcgatgatga gctcggcttg ttcgaggcga cggctcagac gggcattctc
     1201 tttccgcagg cgctggtttt cctccgtcag cgggttggct gtcgatttgc gcccgcgctt
     1261 cttgggagtc aaggcatcga attcgccttg ctccttctgg cgtcgccagg tcgtgagatg
     1321 ggacgaatac aacccctctc gacgcagcaa cccgccgatg gcgccgtcgt cgcggcaggc
     1381 ctcggcttgg gccactatcg agcgcttgta ctcggcagtg aactggcggc gcttgggctt
     1441 ctccggaacc tccgggttgg ggatcgggac cggcgcggcg ccgccggagt tggcagctcc
     1501 tccgctccgg gtcgagtagg cacggcaggt tgccccgccg cgcctctcac agaaccggac
     1561 ttgcgggcct cgcatccggc tctttggatc gatgcgtcac catgccagac tgagctggct
     1621 gggaacttgc ggaagaggat tggccacgcg ccagcggtcg tacagcgaac cgatctgacc
     1681 gtgaaaccaa tcgttggggt atgccttagt catcccccgc cggttgctac gagaccagac
     1741 accttgccgg taataggcaa ctccggcagc ttgcccggag ctggctcctc gtctcaccaa
     1801 gtgtcggtac agaaagcggg gccgcttttt
//
LOCUS       DASRPQ010001273         2766 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3610046, whole genome shotgun sequence.
ACCESSION   DASRPQ010001273 DASRPQ010000000
VERSION     DASRPQ010001273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2766
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3610046"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            157..876
                     /locus_tag="VFD73_14620"
     CDS             157..876
                     /locus_tag="VFD73_14620"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HZI75231.1"
                     /translation="MNTEVVYRSDGLFLEQVRPPSSRHWQLDGDRMAVGRDPSSAVYV
                     SDASVSWHHAELVRRGLSWSIVDTRSTNGTFINDARANEAVLHADDRIRLGQIELIVK
                     QPGLGPQGRQASAVSYDVGWQQGNISNIAGSQSNYYQESNLRYIASRRGRARLLIMWG
                     IVLFLAAQGLGLFEVLKFDNTIFNSINSTSFSQPQLPAQFIPLVGLAAFMSLLGIGLF
                     VFGLIARSGAKREARRLGADW"
     gene            876..1280
                     /locus_tag="VFD73_14625"
     CDS             876..1280
                     /locus_tag="VFD73_14625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75232.1"
                     /translation="MSGERPNAIFNIGSQHGNVSNVAGDVTVYGGQHYTALPADMIGR
                     ELRTIQGIISAMNLDPAARKAAAGYLADADRELGKSRHDAKKVARPIERLTRLLRDIG
                     AIAAGGAALINPLTCIASSLGAAGQAIVRLIA"
     gene            complement(1886..2242)
                     /locus_tag="VFD73_14630"
     CDS             complement(1886..2242)
                     /locus_tag="VFD73_14630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75233.1"
                     /translation="MSSGAFALFVDQQAGGRPNQPIDRIVPLPHLGGHNGIEFDRRRL
                     TLSYDNPQPTALSSLTVTGRFLGVAGSQINVTINVGECQVLDVPRDACAAALHVDQPP
                     AGNVRGPLSALVEYSD"
BASE COUNT          533 a          875 c          852 g          506 t
ORIGIN      
        1 cccaagcacg cgcggataga agaaggtgcg ggctgacgga cctgcgtgcg cgtggtcagt
       61 tggtgtatca gggtcccgtg ccagcgctct gtcccagtat gctggcccgc cgtccccggc
      121 taggtcagac ctccggagaa cgagcagggg ggctacatga acacagaggt cgtttaccgc
      181 tcggacgggc tgttcctgga gcaggtccgt ccgccctcgt cacgccactg gcaactcgat
      241 ggtgaccgca tggcggtcgg ccgcgacccc tcgtcagccg tctacgtcag cgacgccagt
      301 gtctcgtggc atcatgctga gctcgtgcgc cgcgggcttt cctggtcgat cgttgacacg
      361 cgctcgacca acggaacctt catcaacgac gcacgggcga acgaggccgt gctgcacgcc
      421 gatgaccgta tccgcctagg tcagatcgag ctcatcgtga agcagcccgg cctcggtccg
      481 cagggccgtc aggccagcgc cgtcagttac gacgtcgggt ggcagcaggg caacatcagc
      541 aacattgcgg gcagccagtc caactactac caagagagca atctgcgtta tatcgcctcg
      601 cggcgaggcc gggcgcggct gcttatcatg tgggggatcg tgttgttcct ggccgcgcag
      661 ggtctcggcc tcttcgaagt cctcaaattc gacaacacga tcttcaattc catcaattcc
      721 accagtttca gtcagcccca gctcccggcg cagttcattc cgctggtcgg gctggctgca
      781 ttcatgagcc tgctcggtat cggcctcttc gtcttcggcc tcatcgcacg gagcggcgcg
      841 aagagagagg cccggcgcct gggagctgac tggtgatgtc cggcgagcgc cctaacgcga
      901 tcttcaacat cggaagccag cacggcaacg tcagcaacgt cgccggcgac gtgaccgtat
      961 acggcggcca gcactacacc gccctcccgg cggacatgat cgggcgggaa ctcagaacta
     1021 ttcaaggaat catctcggca atgaaccttg atccggccgc caggaaggca gccgccgggt
     1081 acctcgccga tgctgaccgc gagctcggca agtcccgtca cgatgccaag aaggtggcgc
     1141 ggccgattga gcgtcttacc cggctgctga gggatattgg cgcaatcgcc gctggcgggg
     1201 cggccctgat caaccccctt acgtgcatcg cttcaagcct cggcgcagct ggccaggcta
     1261 tcgtgcgcct aatagcgtga tggcctgcgg tgacacaccc tggtacaagc cgtgacaaga
     1321 ataaacgggc cgccgagccg cgtttccgca gccagggggc cgtttcgcaa gtggtggcag
     1381 gcgttgggtt cgaaccaacg taggctgagc cgcccggttt catcccgggt ccgctgcgtc
     1441 cgtggcctgc gggtcgtcgc atgcggcatc ggccgttaga aggtcgctgg cgggataaac
     1501 agcgtgtagg cccccaccac ccgccgcagc ggcccgttac tcgccagcgg cccgaaggcg
     1561 ccgaaagaac gccgcttgac cagcgtccct cacctcactc cggcgattca cgtgccgcgc
     1621 ccggggcgga cgagctgtcc ggcacggcgc ctggcaaggc atagcatctg atcgagatca
     1681 tgatcagggc aaggttattg accggatggg gtccaggggt agttgacacc gccgccctga
     1741 gcacgaaagg cgacaccgca gtacccggct gtgaaggcgg cccgctcata ccattgccgg
     1801 ccctggtctg aggtcgggta gcacagggca tctcagccca gggctacccg acctaagaag
     1861 ggcgccaggt ctcggctgcg tcagttcagt cgctgtactc caccagcgcc gacagcggcc
     1921 cacggacatt ccctgccgga ggctgatcca catggagcgc cgctgcgcag gcatccctcg
     1981 gaacgtccag gacctggcac tcgccaacgt tgatcgtgac attgatctga gagccagcta
     2041 cgcccaggaa gcggcccgtg acagtcaaac tgctcaaagc ggttggctga ggattgtcat
     2101 agctcagagt gaggcgacgg cgatcgaatt cgattccgtt gtggccgccg aggtggggca
     2161 gtggaacgat ccggtctatc ggctggttgg ggcgtcctcc tgcctgctgg tcaacaaaga
     2221 gtgcgaaggc tccagaactc atcatctact cctttttgtg gaccggttca cgagctgata
     2281 caggaaacct ggatctacct gcatggtgcg ggacccgagt aggtgggact cgggaatccc
     2341 tgccatcaac agcctgtcgt gcccaacttt gccagctctc tcttactccc gaaagggcac
     2401 agacagcttg gcacgccccg cctgacctcg tcgaagaccg acaagtccta ctgactgcga
     2461 gcgtagaaga tctcgaagtc acctcctgag ggttattcag ggacagggac gttatgtgaa
     2521 gtttatcctg tccggcggtg tcgcagcata aaaagatggc ccattcacga aaggattgag
     2581 ttatcacgct taatccatag aacaggccat cacgtgcatc atactaccgg gttcgatcgc
     2641 gaagaaatca tcgacctctg catccggata aattccgtgc agcccggggc aggatccccg
     2701 agttggccgc catgcctcgg tcttttcaaa tcggtagtgg ccgcgttgac ctacatgcgg
     2761 cataat
//
LOCUS       DASRPQ010001274         1018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_776166, whole genome shotgun sequence.
ACCESSION   DASRPQ010001274 DASRPQ010000000
VERSION     DASRPQ010001274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_776166"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..296)
                     /locus_tag="VFD73_14635"
     CDS             complement(<1..296)
                     /locus_tag="VFD73_14635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75234.1"
                     /translation="MSSCVDGVFGGQRSIACGAEHAEGAGSPIRDEDVLIGCGDYSIG
                     IRSGAYPLDDTTGAEIDDRERIAQVFDDVQQATIRGDGDPSWVSPPLGAVVGAR"
     gene            339..>1018
                     /locus_tag="VFD73_14640"
     CDS             339..>1018
                     /locus_tag="VFD73_14640"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75235.1"
                     /translation="MASASTDRVAVVDPAAHRVLRWLADPPPGGVSEGNTPNALALSP
                     DGSRLYVAEADANAIAVFRLSGSSSGADPGAAASDSLLGRIPTEWYPTALVATKDSLW
                     VVNGKGSGAGPNPNGPQPNVPIAKVDPHTYVLGQLSGTLLGLPIPEDGQLPDLSVRVA
                     RANGWAEERTKAAAHYPPFEHVIYIIKENRTYDQVLGDLPQADGDSALLFFPRPVSPN
                     HHALAERFG"
BASE COUNT          171 a          348 c          325 g          174 t
ORIGIN      
        1 tgtcgcgctc cgactacagc ccccaagggc ggagataccc agctgggatc accgtctccc
       61 cggatggtcg cctgctgtac gtcgtcgaaa acctgagcga ttcgctcgcg gtcgtcgatc
      121 tcggctcccg tcgtgtcgtc cagcgggtaa gcgccggacc gtatccctat ggagtagtcg
      181 ccgcacccga taagcacgtc ttcgtctcga attggggatc cggcaccctc agcgtgttcc
      241 gctccacagg cgatggaccg ctgtccgccg aacaccccat cgacgcagga cgacatccct
      301 cggcgctcct gctgagtgcc gacggcagac ggctcttcgt ggcatccgcc agcaccgacc
      361 gtgtggcggt ggtggacccg gcagcccatc gggtcctgcg ttggctggcg gatcccccgc
      421 cgggaggagt ctccgagggc aacaccccca acgcgctcgc gctctcgccc gacggcagcc
      481 ggttatacgt ggccgaggcc gacgcgaacg caattgccgt gttccgcctc tcgggatcga
      541 gctcgggggc cgatcctggc gccgccgcca gcgatagtct cctgggacgc attcccaccg
      601 agtggtaccc cacagcactc gtggcgacga aggactcgct gtgggtggta aacgggaagg
      661 gcagcggcgc cgggcccaat ccgaatggtc ctcagccgaa tgttcccatc gccaaggtgg
      721 atccccatac ctacgtgctg ggacagctca gcggtacgct gttgggattg cccattccgg
      781 aggacggtca gctcccggat ctcagcgtgc gggtggcacg agccaacggg tgggcggagg
      841 aaaggaccaa agcagcggcg cactatccgc cgttcgagca cgtgatctac atcatcaagg
      901 agaatcggac ctacgatcag gtcctcggtg acctgcccca ggccgatggt gatagcgcac
      961 tgcttttctt tccccggccg gtgtcgccca atcaccacgc gctggcggag cggttcgg
//
LOCUS       DASRPQ010001275         1463 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3914408, whole genome shotgun sequence.
ACCESSION   DASRPQ010001275 DASRPQ010000000
VERSION     DASRPQ010001275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1463
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3914408"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1463)
                     /locus_tag="VFD73_14645"
     CDS             complement(<1..>1463)
                     /locus_tag="VFD73_14645"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HZI75236.1"
                     /translation="RGRIVQQLLVESLTLAIISGLLGLLVALAGIRLILAIKPGNLAR
                     LNEIGLDPRVLGWALTLCLLTGILVGLAPAITMAHRNLNPYGQDGGRGVAGGVAASRT
                     RRGLVMMEFALAIILLAGAGLLVRSLWSAENVALGFRPERVLSMQLSTTAFRAASQRV
                     NFYNEVLEQIESLPGVESVGIIGDLFIGGNPERVVTADGHEQGIAQRLRFRSDEVSAG
                     FFKAIGTPLLRGGFFSAADGPDSPPVAIINEAMARRLWPGVDAVGKRFKLGSADSGTP
                     WFRVVGVTGDMRRQGLEREPIPQMFEPLAQNPSRLATLLVRTSMDDPLKMVGAVQAAI
                     RRVDKNVPLYGVTTLGNRLGAFLAERRFQTSLLMAFALAALLIATIGIYGLIQYTVVT
                     RTHEIGIRMAVGAQAGEILRMIIGEGLKLSFTGLVLGLVGAWWLGRAGSSLLFGVSAT
                     DPLTFVTVSLLLTAVAIVGCYFPARRATKIEPIVALR"
BASE COUNT          312 a          460 c          442 g          249 t
ORIGIN      
        1 ccgcagagcc actatgggct cgatctttgt tgcgcgtcgc gccgggaagt agcagcctac
       61 gatggcaact gcggttagca acagggaaac ggtaacgaac gtcaacggat cggtggcgga
      121 aacgccgaaa agaagacttg agccagcccg gccaagccac caagctccca cgagtccgag
      181 cacgagtcca gtgaagctca gcttcagccc ctcaccgatg atcatgcgga ggatctctcc
      241 ggcttgcgcg cctacggcca tacggatgcc gatctcgtgg gttcgcgtca cgacggtgta
      301 ctggatgagc ccatagatcc cgatggtggc tatcaggagt gcggctaggg cgaacgccat
      361 caagagcgag gtctggaagc gtcgctcagc gagaaaggcg ccgagccgat tgcccagggt
      421 cgtgacgcca tagagcggta catttttgtc cactcgacgt atggcagcct ggaccgctcc
      481 taccatcttc aatgggtcat ccatagaggt tcgaacgaga agggtcgcga gccgggaagg
      541 attctgcgcc aacggttcga acatctgcgg gataggttcg cgctccaggc cctgacggcg
      601 catatcgccc gtgacgccca ccaccctgaa ccagggggtg cctgagtccg ccgagccgag
      661 cttgaaccgc ttgcccactg catccactcc tggccacaag cggcgagcca tcgcctcgtt
      721 gataatcgcc accggggggg aatccggccc atctgcggct gaaaagaagc cccccctgag
      781 tagtggagtt ccgatggcct tgaagaatcc tgcactgacc tcgtcgctgc ggaaccgcag
      841 gcgctgggca ataccttgct cgtgcccatc ggcggtaacg acgcgttccg ggttgccgcc
      901 gataaaaaga tcgccaataa tcccgacgct ctccacaccg gggagcgatt cgatctgttc
      961 gagcacttcg ttgtaaaagt tgacccgttg cgaggcggcc ctgaaagccg tagtggagag
     1021 ctgcatcgaa aggacgcgct caggcctgaa tcccagcgcg acattctccg ctgaccacag
     1081 gcttcgaacc agaagaccgg ctccagccag cagaatgatt gctaacgcga attccatcat
     1141 taccagaccg cggcgggtcc ggcttgcggc aactccgccc gcgacgcctc ttccgccatc
     1201 ctgaccgtag ggattgaggt tgcggtgcgc catcgttatc gccggcgcga gcccaaccag
     1261 gattcctgtg agcaggcata gagtcagggc ccagccgagc acgcgcggat cgaggccgat
     1321 ctcattcaga cgggccaggt tccctggctt gatggctaaa ataaggcgga tgcccgcaag
     1381 agcgaccagc agccccagca gccccgagat aatcgccagc gtcaggctct cgacgagtaa
     1441 ctgctggacg attcggccac ggc
//
LOCUS       DASRPQ010001276         1033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3610603, whole genome shotgun sequence.
ACCESSION   DASRPQ010001276 DASRPQ010000000
VERSION     DASRPQ010001276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3610603"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          176 a          330 c          335 g          192 t
ORIGIN      
        1 catgctgggc ggccctggcg ccaatcggac ggccggccca gggtgttgga gccgggggct
       61 ggccgtctgg caatcccgct agtgcattcc gctggtgtcg cgaggatcgc cttgctgatg
      121 gggctcgttc ggcggctgcc ccggtccagc cggtacggag gcacacccgg cgaacgccaa
      181 gatgacgaaa agcacggcca tccgcctcgg tgagagcatt agttccctac tcaccgccct
      241 attcggttag cctgtgccgc gcgactaata ggctcgatta ggcagcgttg agttaggcgt
      301 cgcgcagtcc cgcatacccc tatttccgaa gcccactaat tcagccagcc tttcgaaaag
      361 gagcactatc cagcgtccct cgcaacgccc gggggaaacg tagaacggca tcctccgttc
      421 catgccggag tgccggcata aaagggccgc tggagcggcc tctcggcggg tccacgaaag
      481 cccatcgcca aagcgcacaa gtcgctcagc agagaccacg gagcggtgat cgcgagagag
      541 cgggcgcaca atccgtggct gacatttcct tgaccgccag cgcataggat cgaagcgggc
      601 ttggtgtcac tggtccggcc ctgggccaag ccccgcgtgg ggagcggcgt cgagatgatc
      661 ccccaacccg gcgccgctcc ttccccgaat gccgcaccgt gaccagcggt ctttgacgct
      721 gagctgcgtc agtgagcggg tcgttccgct cccgagcctt gaggtggacc ccgatcgtga
      781 gacagccgga gcctcttctt aaggtgtagt cccgccgatc ggtatgggct gcaccgattt
      841 gatgtcgctc ggtgttccga gatgatttcg cccggcattc cgggatgatt tcgcccggtt
      901 agtcggcgcc tctgctggcc cgattagcgt ccgctccttt gctttgcacg gggggagctg
      961 atgccagcag agaggacaac gatgcgccat gtgcgcgagg gacttcgttt gatgaccgcc
     1021 ggggtcgggc tca
//
LOCUS       DASRPQ010001277         1573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2682146, whole genome shotgun sequence.
ACCESSION   DASRPQ010001277 DASRPQ010000000
VERSION     DASRPQ010001277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2682146"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            35..>1573
                     /locus_tag="VFD73_14650"
     CDS             35..>1573
                     /locus_tag="VFD73_14650"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012493.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HZI75237.1"
                     /translation="MPRWVRAPTIIAEALVGVSDPLLSALSPLEEVTPGEVAAALAQS
                     LALPEASDTPPGWLLPEQVCSFRRIIAALRAYHGALLADPVGSGKTYVALAAASVLNR
                     GTTACIVPATLVRQWEATASRLSVPIVVCSHEQVSRGRLPRRTRGLVIIDECHRFRNP
                     NTRRYEHIARWLIGRPALLVTATPVVNRLEDLAFQLLLAVRDTALSSEGIVSIREALS
                     RASPLPSLGRIVVEADTAPSHRPRRLAMSSAPSISECREVGGLVHMLDRLRLSRCPPI
                     ARLIRATLLRSAGSSPAALAGALRRYQRLLLHARDALYAGQRFDRAELRRFSAELGDQ
                     LVWWELFPDSGAEAEIELSDLEMVSGLIAKAESAAGEPDPKVEQLRSFLKDGIPTLVF
                     TNSRDTVRHLRKQLSEFRIAWCTGDLAGIGATRAPRQSVLAWFRQATNLDYAPQHLVV
                     TDVAAEGLDLQRAARVVHYDLPWTPMRLEQREGRSVRRGSHNGEVEVIRFHPPELLEK
                     RLKAE"
BASE COUNT          280 a          486 c          494 g          313 t
ORIGIN      
        1 ctcgggctct cccagtcggc gcaacgtaag ctccgtgcct cgctgggtcc gcgccccgac
       61 catcatcgct gaggcgctgg tcggagtttc cgatcccctg ctcagtgcgc tcagccccct
      121 ggaagaagtc accccaggtg aggtggctgc ggcattggca cagagtctgg ccctgccaga
      181 ggcttcagat actcctcctg gttggctgct ccccgaacag gtctgcagct ttcgcagaat
      241 tatcgcagcg cttcgggcat accatggcgc acttctggcc gatccggttg ggagtggcaa
      301 gacctatgtg gcgctcgccg cagcctcggt gctgaatcga gggacaacag cgtgcattgt
      361 cccggctacg ctggtgcggc aatgggaagc gacggcgtct cggctttcgg tcccgatcgt
      421 ggtctgctcc catgagcagg tgagccgggg tcggctgcca agaagaaccc gtggactcgt
      481 catcatcgat gagtgccatc gcttccgaaa cccgaatacc cggcgctacg aacatatcgc
      541 acgctggctg atcggccgac cggcgttgct ggttacggct actcccgtgg tcaaccgact
      601 cgaggacctg gcgttccaac tgctgctcgc agttcgagac acggcacttt catcggaagg
      661 gattgtctcc atccgggaag cgctcagccg cgcctctccc cttccctcct tgggccggat
      721 cgtggtcgag gccgataccg ctccctctca tcgccctcgg agactggcca tgagcagcgc
      781 tccgtcgatt tccgaatgca gggaggtcgg cgggttggtc catatgctgg acaggctgcg
      841 tctcagccgg tgtccgccga tcgcacgact gattcgagct acgcttttgc gatcggcagg
      901 ctccagcccc gccgctttgg ctggtgcgct ccgacgttat caaaggcttc tgctgcatgc
      961 ccgcgacgct ctctacgcgg gccagagatt cgatcgagcc gagctacgac gtttcagtgc
     1021 ggagttgggg gatcagctgg tgtggtggga gcttttcccc gactccggcg cggaggccga
     1081 gatcgagctg agcgacctcg agatggttag cggtctgatt gccaaagccg agtccgcagc
     1141 cggagagccc gatccgaaag tcgagcaact gcgaagcttt ctgaaagatg gaataccgac
     1201 gctggtattc accaactcca gggacacagt gaggcatctc cgaaagcagc tctctgaatt
     1261 tcgaattgcc tggtgcaccg gtgatttggc tggaattggc gcgactcgag caccacgaca
     1321 aagcgtgctg gcctggttcc gacaggcgac aaacctggac tacgcgccgc agcatctcgt
     1381 tgtcaccgat gttgcggccg aagggctcga tcttcaacgt gcggcccggg tggtgcatta
     1441 cgatctccca tggactccaa tgcggctgga gcagcgcgaa ggcagatcgg tccggagagg
     1501 ctctcacaac ggggaagtgg aggtgattcg gttccatcct cccgagctgc tggagaaacg
     1561 gctcaaggca gag
//
LOCUS       DASRPQ010001278         1379 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4546626, whole genome shotgun sequence.
ACCESSION   DASRPQ010001278 DASRPQ010000000
VERSION     DASRPQ010001278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1379
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4546626"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..297
                     /locus_tag="VFD73_14655"
     CDS             <1..297
                     /locus_tag="VFD73_14655"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HZI75238.1"
                     /translation="AATAGTATLVISGELDVTTTPLLSRQLAQILECRPQRLVFDMSG
                     VDFIDCAAIRLIALTGRFLPEGRRPVIRSPSPAARRLLELTGLAAHCEVDNPSG"
     gene            858..>1379
                     /locus_tag="VFD73_14660"
     CDS             858..>1379
                     /locus_tag="VFD73_14660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75239.1"
                     /translation="MPLIGHDSVAALMREADTAAERARDQEARALSLAQEAKDSAHES
                     ARVAHECDEFVQQVRREAERNVAAAMGEARERLERERRDAEADARKDIEKAQAQASAR
                     TGEAERSAEEAQARAREAIQEASQALIEARDRASQAAAAANEIAAQASQEADQLAKHA
                     QKRAAEAERRVVEA"
BASE COUNT          263 a          431 c          487 g          198 t
ORIGIN      
        1 gccgcgaccg cagggacggc cacgctcgtt atcagcggcg agctagacgt gaccaccacg
       61 ccgcttctct cccggcagct ggcacaaatc ctggagtgca ggccacagcg cctcgtcttc
      121 gacatgtccg gggtcgattt cattgactgc gccgccatcc ggctgatcgc cctcacgggg
      181 cggttcctgc cggaagggcg ccgacccgtc atccgcagcc ccagcccagc cgcccgcagg
      241 ctgctggagc tcaccggctt ggcggcgcac tgcgaggtag acaaccccag cggttgagtc
      301 accaggtgcc ggcagttcgc cgggtcaggg tgtggccggt caggagctgg ccgccatgat
      361 cgttatgcgc tgcgattatc gcgcggcccg gcacgctgcg cgaagatcac caaggccgga
      421 caccacccac ctcctgcgaa ccgggctcag cggatgctcc caaggcaaca ggtgtggttg
      481 ccgggatcga ggctgactag gggccatgac ctgcgcgaca ggatctcaga agccgtcgat
      541 tacgcgaata agagcctggt tggggggtac agcacgtcag ctaagagacg tgcaccacct
      601 cggggaggtc tcatgggaag acgggatcag tgcgccgctt gtcgcgtatt accaggactg
      661 gcctgaccga gctcccagac aacgctgcct ggctgctgtc gaaggctttg aagcccgcgc
      721 tgtcggctgc ctcaggcgtc tcctccgtca gggaggggat ttccgatgtc gcatcatccg
      781 cggctgacgc tgctgggggc gctgggtcaa ctgttcggca taaggccagg acagccaagc
      841 gatcggtggt ggaagccatg cctctcatcg gtcacgactc ggttgcggcc ttgatgcggg
      901 aagcagatac cgccgctgag cgtgctcgcg accaagaggc ccgagcgctg tcgctggccc
      961 aggaagcgaa agacagcgcc catgaatctg ctcgggtagc tcacgagtgt gacgaattcg
     1021 tacagcaggt gcgccgtgag gccgagcgca acgtggcagc ggccatgggc gaggccaggg
     1081 aacgccttga acgtgaacgg cgtgacgcgg aggccgacgc gcggaaggac atcgagaagg
     1141 cccaagcgca ggcgtcagct cgcacggggg aggcggagcg gagcgctgaa gaagctcagg
     1201 caagagcccg tgaggctatc caggaggcga gccaggccct gatcgaggca agggaccggg
     1261 ccagccaggc agcggcggca gcgaatgaga tcgccgctca ggccagccaa gaggctgatc
     1321 agctggcaaa gcacgcgcag aagcgcgccg ctgaggcgga acgacgggtc gtcgaggcg
//
LOCUS       DASRPQ010001279         3817 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2682340, whole genome shotgun sequence.
ACCESSION   DASRPQ010001279 DASRPQ010000000
VERSION     DASRPQ010001279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3817
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2682340"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..490)
                     /locus_tag="VFD73_14665"
     CDS             complement(<1..490)
                     /locus_tag="VFD73_14665"
                     /inference="COORDINATES: protein motif:HMM:NF014015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75240.1"
                     /translation="MKDTEATLLSSRRPVAFAWSGGKDSSLALAALRADPTVEVVALL
                     TTVTRDFDRISMHGVRRSILAAQVDAIGLPLVEAPIPACASNHLYEEALVSALGQLRH
                     MYPGLHHLAFGDLFLQDVRAYRENVLRPLEWNPLFPLWGVDTATLARRFIEEGYGAII
                     TCV"
     gene            611..1729
                     /locus_tag="VFD73_14670"
     CDS             611..1729
                     /locus_tag="VFD73_14670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75241.1"
                     /translation="MRVCWFCVLLTIPFALVQAQQPAPEDVVLDLLGSQGWRAFELAR
                     LRERNPWLEDKPVYQGLWLRGSGAADSSVFDLLPFASAPRSRAGTALAYDLGIGSRMW
                     SGFTETDPTRSAVLGTAARGLLGLWRQISEIGGGEHDLLAPRPCPGMRVRLGSEALFG
                     FGTDGRDTPRDTRALIVYADCQRDLGGDWHVSLGLRGYQWRTPGQPDRHDLESAVRIA
                     HVPQHDGAALFVDASWTPHYHRAILHIERPVGLAGIRFRPLLRLAWGENLPFGLGFWP
                     GGFDGFPGLKDGEGRGNRELMAAMDVQRPLLGKLSFRALFALGRTATDGPLIPQEPLL
                     LGARAGLNLGTRFGLVRLEYGLATEHHHAVFIRLGRIL"
     gene            1884..3557
                     /locus_tag="VFD73_14675"
     CDS             1884..3557
                     /locus_tag="VFD73_14675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75242.1"
                     /translation="MSTTELQQVADRRRASPSAAVVLPDHVAAGPDRRYQIALILAVV
                     LGIAVRAYHVMSQDFPLNDGGLFYTMVRDLQAAHYHLPAFTSYNDAGIPYGYSPLGFY
                     LAAFLDNWTPLSLIQIFRWLPLVTTALIVVAFADLARTLLASRTAVVTSILAFGLLPR
                     SFIWMLMGGGLTRSLGFLFALITLRLLYSFYTSCRWSYVPWIALAAGLTVLSHLGTAP
                     FVAFSGILLLIAYGRHRQALLGSAVAALGAAVLSAPWWLTVLKVHGPGPFLAANATGG
                     SIFRSLSLADTVVTLAQLGLGTAEAVLAVIGMLGALGFFYSLTMKDWLLPAWWIAIVT
                     LDARQGSTFSTVAIALLAGVAVAHVLLPAMRRIPVTTLRQSPGRAGWTPEFVLGSFLV
                     FATASAFIRTPIPGGMTDMGALTADELEAMSWVAEETAPDARFLIVAGTPWEIDRTSE
                     WLPALANRKSVATVQGFEWRPLGEFARKKQEYIDLQGCAGWISQCLRDWSENTGESFT
                     HVYIPKSPDRNCCQMLRYSLERDRRYRLIYDGPGAVLFARRQSKVLARR"
     gene            3566..>3817
                     /locus_tag="VFD73_14680"
     CDS             3566..>3817
                     /locus_tag="VFD73_14680"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI75243.1"
                     /translation="MMTSRSVTVVIPCFNEEGNLGETHRRVSSTLAQACGAYEILYVD
                     DGSKDRTPEMLRALQAEDSHVGVVFLSRNFGHQFAVTAGL"
BASE COUNT          619 a         1169 c         1228 g          801 t
ORIGIN      
        1 cgacacaggt aatgatcgcg ccgtatccct cctcgatgaa tcgtcgtgcc agtgtagccg
       61 tgtctacccc ccacagcgga aacagtgggt tccactccaa aggccgaagg acgttttccc
      121 gataggccct gacatcctgc agaaagagat cgccgaatgc caggtgatgg agtccgggat
      181 acatgtgccg gagctggccc aaggcagaga ccagagcctc ttcatacaga tgattgctgg
      241 cgcaggcagg gatcggcgcc tcgaccagcg gcagaccaat ggcatccacc tgagccgcga
      301 gaatagagcg tcgaacgccg tgcatgctga tccggtcgaa gtcacgggtg accgtggtga
      361 ggagggcaac aacttcgaca gtggggtcgg cgcggagcgc agccagtgcg agactgctgt
      421 ccttgccccc gctccaggcg aacgcgacgg gacgtcggct gctcaggagg gttgcttcgg
      481 tgtctttcat ggaggcaaac tagtaaactg cgctcgtgcg cccaatctcg gccggctgca
      541 agggaccggg atcaccgccc gaaatctcgc ggcgctgcga ccatggtgcc gactgatcga
      601 ggaagtcgct gtgcgcgttt gctggttctg tgttctcctt accattccct ttgcgctggt
      661 ccaggcgcag cagccggcac cggaagatgt cgtgctggac ctgctcggct cccagggctg
      721 gcgagcgttc gagctcgcgc gactcaggga gcggaaccct tggctggaag acaaaccggt
      781 gtaccaaggc ctctggctga ggggaagtgg cgcggccgac tcgtcggtct tcgatctcct
      841 gccctttgcg tctgcgccgc gcagccgagc ggggaccgcg ctcgcctacg acctgggcat
      901 cgggtcacgc atgtggtccg gctttaccga aaccgacccg acgcggagcg ccgttctcgg
      961 gaccgccgca cgcggacttc tcggcctgtg gcggcagatt tcggagattg gcggcgggga
     1021 gcacgacctg ctggcgcctc gtccctgtcc cggaatgcgg gtgcgcttgg gatccgaggc
     1081 cctcttcggc tttggtacgg acggtcgaga tactccccga gacacgcgtg ccctcatcgt
     1141 gtacgccgat tgtcaacgcg acttgggggg tgattggcac gtcagcctgg ggctgcgagg
     1201 ttaccagtgg cggacaccag ggcagcccga tcggcacgac ctcgagtcgg ctgtacgcat
     1261 cgcccatgta cctcagcacg acggtgccgc tctgttcgtc gatgccagct ggacgcctca
     1321 ctatcaccgc gcgattctcc acatcgagcg gccggtaggg cttgccggaa tccggtttcg
     1381 gccgcttttg cgactcgcat ggggagagaa tctcccattc gggctcggat tctggccggg
     1441 aggattcgac ggctttccgg ggctcaagga tggtgagggg cgggggaatc gagagctcat
     1501 ggctgccatg gatgtgcagc ggcctctcct tggcaagctg tctttccgtg ctctcttcgc
     1561 gttgggccgg acggcaacgg acggtccact cataccgcag gagcctttgc tgctgggtgc
     1621 ccgtgccggc ctgaacctcg gcactcgatt tgggttggtg cggctggagt acggactagc
     1681 taccgagcat catcacgcag tgtttatccg gctcgggcgg attctgtagc gatctcgcat
     1741 taggcagaac gtgccattct ggccgcaacg tgagttgcct cactctactc ttgtgcggca
     1801 taatccagga ttggcggtgt agaatacgta cgttcgataa ttgcaggatt gtgccatttc
     1861 cttgattcgc gggtagcctc gttgtgagca caacagagtt gcagcaggtg gccgatcgcc
     1921 ggcgcgcctc tccttccgcc gcggtggttc tcccggatca cgttgcagcc ggaccggacc
     1981 gccgctacca gattgcgctt attctggcgg tggtgctggg gatagccgtc agggcctatc
     2041 atgttatgtc ccaggacttt cctctgaacg acggaggtct gttctatacc atggtgcgcg
     2101 accttcaagc ggcgcactac caccttcctg cgttcacatc atacaacgac gctggaatcc
     2161 cttacggcta ttcaccgctg gggttctatc ttgctgcctt tttggataat tggaccccgc
     2221 tgagcctcat ccagatcttc cgttggctgc cgttggtcac caccgcgttg atcgtggtgg
     2281 cattcgccga cctggcgagg acgctcctcg cgtcgcgcac cgcagtggtc acctcgattc
     2341 tcgcgttcgg actccttccg cgcagcttca tctggatgct catgggtggc gggcttaccc
     2401 gctctctcgg ttttctgttc gcgctgatca cgctgcggct actgtacagc ttctacacga
     2461 gttgccgctg gtcttacgtt ccatggatcg cactcgcggc agggctgacc gtgctcagcc
     2521 atcttggcac agctcccttc gtggccttta gcgggatcct cctgctgatc gcctatggcc
     2581 ggcaccggca ggcgctgctc ggttcggccg tagcggccct gggcgccgca gtgttgagcg
     2641 cgccctggtg gctcaccgtt ctgaaggttc atggtcccgg accattcctg gctgcgaatg
     2701 ccaccggagg ctcgatcttt cgctcgctca gcctggccga cacggtggtg acattggccc
     2761 agctcgggtt ggggaccgcc gaagcagtgc tcgcggtcat cggcatgttg ggcgcattgg
     2821 ggttcttcta ttccctcacc atgaaggact ggctgcttcc cgcctggtgg attgctatcg
     2881 tcactctcga tgccaggcag ggctccacgt tctccaccgt tgccatcgca ctcctggccg
     2941 gcgtggccgt tgcgcacgtg ctgcttcccg ctatgcggcg gataccggtg acaaccctgc
     3001 ggcagagccc ggggcgggcc gggtggactc cggagtttgt ccttggatcg ttcctggtgt
     3061 ttgccacggc cagcgccttc attcgcacgc cgatccccgg tggaatgacc gacatgggag
     3121 ccctcactgc agacgagctc gaagccatga gctgggtggc ggaggagaca gcgcccgatg
     3181 ctcggttcct catcgtggcc gggacccctt gggagatcga tcgcacgtcg gagtggctgc
     3241 ccgcgctggc caatcgaaag agcgtcgcaa cggtgcaggg tttcgagtgg cggccgctag
     3301 gcgaattcgc caggaagaag caggagtaca tcgacctcca ggggtgcgcc gggtggatct
     3361 cccaatgtct tcgcgactgg tccgagaaca ctggcgagtc gtttactcac gtctacattc
     3421 ccaagagccc agaccggaac tgttgccaga tgctgcgcta ctcccttgag cgggaccggc
     3481 gataccgcct gatctacgat ggcccgggag cggtgttgtt cgcacgccgt caatccaagg
     3541 tgctggcgag gcgctgaggt gtgaaatgat gacctcaagg tcggttacgg tcgtgattcc
     3601 ctgctttaat gaagagggaa atctcggaga aacgcaccgg agggtcagca gtaccctggc
     3661 ccaggcgtgc ggcgcctatg agatcctcta tgtcgatgac ggcagcaagg accgcacgcc
     3721 ggagatgctt cgcgcgctgc aggcggaaga ttcccatgtg ggggtggtat ttctctcccg
     3781 gaacttcggg catcaattcg cggtgacggc cgggctg
//
LOCUS       DASRPQ010001280         1071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1086007, whole genome shotgun sequence.
ACCESSION   DASRPQ010001280 DASRPQ010000000
VERSION     DASRPQ010001280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1086007"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="VFD73_14685"
     CDS             <1..207
                     /locus_tag="VFD73_14685"
                     /inference="COORDINATES: protein motif:HMM:NF012346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TCP-1/cpn60 chaperonin family protein"
                     /protein_id="HZI75244.1"
                     /translation="GWNAATGEFGDMLEEGILDPTKVTRLALQNAASVAGLLLTTEVM
                     VAEAPKDEEHSHAGPPGGMGGMDM"
     gene            490..>1071
                     /locus_tag="VFD73_14690"
     CDS             490..>1071
                     /locus_tag="VFD73_14690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75245.1"
                     /translation="MGKLRYRGMMFIGCVGFLVLGACGREGQDEMSWARGALERNKSI
                     EVVAADQQSRTFTVRVKDGGELRTVHADEVIGSPAGASAGTAAHPLNDRTASPSAASE
                     AAPVEQPVVQAQSAGDAEPAADAETPVTHSQPVLTSESSAGLEHVTPGRVLESGPGYS
                     ITSAQAAMPGAARMRDSASSAPLERRHEPIVCQG"
BASE COUNT          197 a          336 c          351 g          187 t
ORIGIN      
        1 ggctggaacg cagccacggg agaattcggc gatatgctcg aagagggcat cctggatccg
       61 accaaggtga cccgtcttgc gctgcagaat gccgcctcag tggcggggtt gctgctcacg
      121 acggaagtca tggtggcaga ggctccaaag gatgaggagc acagccatgc tggcccgccg
      181 ggcggcatgg gcggaatgga tatgtaatca ccctctctaa agaggtatcg attctaaaaa
      241 ggacactcga taggctttac ataacagtta cgggttggcg ccaggtctct gccgggcgtc
      301 ggtccggaaa gacgcggaac aagaccccct attccgcgca ttcctcgagg ccccactctg
      361 tggggcctgt ttttttgcac gaccgtttgt cgacacttcg cgaccgcggt cacagcatgc
      421 gcgtaacaca aggctgcagc acttccttac agcctggccg cggtttatcg tccccgcaga
      481 ggaggctcca tgggcaagct tcgctaccgc ggcatgatgt ttatcggctg cgtcggcttt
      541 ctggtactcg gtgcctgtgg tcgcgagggc caggatgaga tgagctgggc gcgaggggcc
      601 ctcgagcgca acaaatcgat cgaggtcgtg gctgcggatc agcagagtcg caccttcacg
      661 gtgcgggtga aggatggcgg tgagctgcgc accgtacatg ccgatgaggt aatcggctct
      721 ccagccggcg catcggccgg gactgcggca cacccactga atgaccgcac agcttctccc
      781 tctgcagcct ccgaggccgc tccggtggag cagcccgtgg tgcaggcgca gtcagcgggt
      841 gacgcagagc ccgccgctga cgccgaaact cccgttaccc attcgcagcc cgtactgacc
      901 tcggagagct ccgctggcct cgagcacgtg actcccgggc gcgtgctcga atccgggccc
      961 ggttacagca tcacatctgc gcaggcggcc atgcccggag ccgcgcgcat gcgcgactcc
     1021 gcgagcagcg cgccgctgga acgccgccac gagccgatcg tgtgccaggg g
//
LOCUS       DASRPQ010001281         1120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3611053, whole genome shotgun sequence.
ACCESSION   DASRPQ010001281 DASRPQ010000000
VERSION     DASRPQ010001281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3611053"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            70..>1120
                     /gene="ltrA"
                     /locus_tag="VFD73_14695"
     CDS             70..>1120
                     /gene="ltrA"
                     /locus_tag="VFD73_14695"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: protein motif:HMM:TIGR04416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZI75246.1"
                     /translation="MSEDAPVNAGAVGWPQPGAAYLAVRRMQTKLHRWAGEDSSRCFG
                     DLFNLVYDPAFLVHAWERVSANKGAQTAGIDKATVARVEAWVGVEAFLGYIRDSLKAG
                     GFRPVEVRQVRIPKGNTGKFRKLGIPTIADRVVQASLKLVLEPVFEADFQSCSYGFRP
                     NRRAHDAIAEIHHLASSPGKYHWVLETDIKACFDEISHTALMGRLRARIKDKRICALV
                     KAFLKAGVLTEIGGREETPAGTPQGGILSPLLANIALSALDDYFTRQWQCEMGTPWRR
                     EKRRRNGQGNWKLIRYADDLVLMVSGDRRHAEELRQEVAAALASLGLRLAPEKTRVVH
                     IDEGFDFLGYHIRRMR"
BASE COUNT          220 a          320 c          388 g          192 t
ORIGIN      
        1 tactccgagc gcgggaaagc cgcgcgcacg gggaagggcg gcagcgtgtc agtcaaggaa
       61 gggaaagcaa tgtccgaaga cgcgccggtg aatgccggcg ccgtggggtg gccgcagcct
      121 ggtgcggcct atcttgcggt acggaggatg cagaccaagc tgcaccgctg ggcgggagaa
      181 gactcctccc gctgcttcgg tgacctgttc aacctcgtct acgacccggc gttcctggtg
      241 cacgcgtggg aacgcgtgtc tgctaacaag ggcgctcaga ctgcgggaat cgacaaggcc
      301 accgtggcca gggtcgaggc ctgggtcggg gtcgaggcgt tcctgggcta tatccgggac
      361 tcgctgaaag cgggcgggtt ccggccggtt gaggtgcggc aggtgagaat tcccaaggga
      421 aataccggga aattccggaa gctgggaatt cctactatcg ctgaccgcgt ggtccaggca
      481 agcctgaagc tggtgctcga acccgtcttt gaggcagact ttcagtcgtg ctcttacggg
      541 ttccgcccga accgccgtgc tcatgacgcg atcgccgaga ttcatcacct ggcatccagt
      601 cccgggaagt atcactgggt gcttgagacg gacatcaaag cctgtttcga cgagatttcg
      661 catacggcac tgatgggccg cctgcgggcg aggatcaagg acaagcgtat ctgcgcgctg
      721 gtgaaggcgt tcctgaaagc cggggtcctt accgaaatcg gcggccggga agagacaccg
      781 gccggaacac cgcaaggcgg aatcctttca ccgttgctcg ccaatatcgc cctgtcggcg
      841 ctggatgatt atttcacccg gcagtggcag tgcgagatgg gaactccgtg gcggcgggaa
      901 aagcgcagaa ggaacggcca gggcaactgg aaactcatcc gctatgcgga tgacctggtc
      961 ctgatggtgt cgggcgaccg gcgccacgcc gaggaactgc gccaggaggt ggcagccgca
     1021 ctcgcatcgc tggggctgcg gctggcaccg gagaaaacca gggtggtcca catcgacgag
     1081 ggctttgact tcctcggcta tcacatccgc aggatgcgca
//
LOCUS       DASRPQ010001282         1978 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1731910, whole genome shotgun sequence.
ACCESSION   DASRPQ010001282 DASRPQ010000000
VERSION     DASRPQ010001282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1978
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1731910"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..306
                     /locus_tag="VFD73_14700"
     CDS             <1..306
                     /locus_tag="VFD73_14700"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI75247.1"
                     /translation="PSPKEGWGITVIEAAACGTPSLASDSPGLRDSVRHGETGFLVPH
                     GDATALAARMLELANAPALVARLGERARLYAEGLTWERTARETLEHLTDIIEGTARR"
     gene            322..639
                     /locus_tag="VFD73_14705"
     CDS             322..639
                     /locus_tag="VFD73_14705"
                     /inference="COORDINATES: protein motif:HMM:NF014534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPF/RaiA family ribosome-associated protein"
                     /protein_id="HZI75248.1"
                     /translation="MQTTVTARHCEITELLRERAVSVIERLGAQAPRPIESTVVFDTD
                     GLQQSVELRLHVARGEILIAKAEAADHRTALDRAEEKLRRQIERAADRPRRARSTQTN
                     RLR"
     gene            639..1601
                     /gene="hprK"
                     /locus_tag="VFD73_14710"
     CDS             639..1601
                     /gene="hprK"
                     /locus_tag="VFD73_14710"
                     /inference="COORDINATES: protein motif:HMM:TIGR00679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr(Ser) kinase/phosphatase"
                     /protein_id="HZI75249.1"
                     /translation="MLRLGDFLSRRGDPLQLEALTGDLGLDRQVSAAEVAGPGLALAG
                     YTGRFAANRLHVLGETEITYLNSLPPEQRKQSLVTFFGFDLPCIFITKGQEVPAELLE
                     LARNKGVPVLRSKLKTSEFYRRIKPIVEEAFAPRTTLHGSLADVYGVGLLFVGRSGIG
                     KSECVLDLVERGHRLVADDVVQVTRRGNDVLIGRGHELAAHHMEIRGIGLIDIPALFG
                     VRAVRQQKRIEVVVQLEDWETAKDSDRTGLSREQTTILDIPVPRVVVPLNPGKNITVI
                     SEVVAMMHLLRYSGVDVAAAFNARLIKRMKEQRGVREYLQEDYE"
     gene            1594..1968
                     /locus_tag="VFD73_14715"
     CDS             1594..1968
                     /locus_tag="VFD73_14715"
                     /inference="COORDINATES: protein motif:HMM:NF015567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75250.1"
                     /translation="MSDELLGVVVCHAGLAPALVQAAEQISGVHGALVPVSNTGCDRD
                     TLEDRVMRAVDGKPAVVFVDLASGSCSFAVLKRLRGEPSVKVVTGVNLAMLVDFVFHR
                     SLSPQEAASRALAAGEKSIRIP"
BASE COUNT          352 a          606 c          676 g          344 t
ORIGIN      
        1 ccgtcgccca aagagggctg gggtattacc gtgatcgagg cggccgcatg cgggactcca
       61 tcgctggcat ccgacagtcc cggccttcgg gactcggtcc gccatggcga gaccgggttt
      121 ctggtgccgc acggcgatgc gaccgccttg gctgcccgca tgctggagct ggccaacgca
      181 cctgcattgg tggcccgcct gggcgagcgc gcccggctgt acgcggaagg attgacctgg
      241 gagcgcaccg ccagagaaac gctcgaacat ctgaccgaca tcatcgaggg cacggcaaga
      301 cgctgagccc ggggagcagt catgcagaca accgtcacgg cgcgtcattg cgagattacc
      361 gagctcctgc gggagcgggc cgtctccgtt attgaacgac tgggggccca ggcgccgaga
      421 cccatcgagt cgacggtcgt gttcgacacc gatggcttgc aacaaagtgt ggagctccgg
      481 ctccacgtcg cgcgtgggga aattctgatc gcaaaggcag aggcggcgga tcatcggacc
      541 gccctcgacc gggccgagga aaagctgcgg cgccaaatcg agcgcgcagc cgatcggccc
      601 cgccgcgctc gatcgaccca aacaaaccga ctgcgataat gctgcgactc ggagacttcc
      661 tctcccgccg gggcgacccc cttcagctcg aagccctgac tggtgatctc ggcctggacc
      721 ggcaggtctc tgccgcggag gtggccggtc ccgggctggc gttggcgggc tataccggaa
      781 ggttcgccgc caaccggctg catgtgctgg gcgagaccga gatcacctac ctgaactcgc
      841 ttcctccgga gcagcggaag cagtccctgg tcacgttctt cgggttcgat ctgccctgca
      901 tcttcataac caaagggcag gaggttcccg cggagttgct cgagctggcg cggaacaagg
      961 gtgtgccggt cctgcgcagc aagctcaaga cctcggagtt ctatcgccgg atcaagccca
     1021 tcgtggagga ggcatttgcc ccgcgcacca cactgcacgg gtcgttggca gacgtgtatg
     1081 gcgtgggact cctgttcgtg ggccgatccg ggatcggaaa gagcgaatgc gtgctcgacc
     1141 tggtggaacg cgggcaccgg ctggttgccg acgatgtcgt gcaggtcacc cgtcgcggca
     1201 acgacgtgct gattggccgg ggccacgagc tggcggccca ccacatggaa atacggggca
     1261 tcgggctgat cgacatcccg gcgttgttcg gggtacgtgc agtcaggcag cagaagcgga
     1321 tcgaggtggt ggttcagctg gaggactggg agaccgccaa ggacagcgat cgcaccggcc
     1381 tgtcgcgcga acaaaccacc atcctcgata tcccggtccc gcgcgtcgtg gtgccgctca
     1441 accccggcaa gaacatcacc gtgatctctg aggtggttgc aatgatgcac ctcctgcgct
     1501 actccggagt cgatgtggcc gcggcgttca acgcacgctt gatcaagcgg atgaaggagc
     1561 agcgcggggt gcgggaatac ctgcaggaag attatgagtg acgaattgct tggcgtggta
     1621 gtgtgccacg ccgggctggc cccggcattg gtccaggcgg cggagcagat cagcggagtt
     1681 catggtgcgc tcgttccggt gtccaacacc gggtgcgacc gagacaccct ggaggaccgg
     1741 gtcatgcggg cagtcgacgg aaaaccggcg gtggtcttcg tggatctggc gagcggctcc
     1801 tgttccttcg cggtgctcaa gcgtcttcgg ggtgagccat cggtcaaggt cgtaaccgga
     1861 gtgaacctgg ccatgctggt tgatttcgtt ttccatcgct cgctgtcgcc gcaggaagca
     1921 gcgtcccgcg ctctggctgc cggggaaaag tcgatcagga tcccctgatg cctattgt
//
LOCUS       DASRPQ010001283         2592 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1411977, whole genome shotgun sequence.
ACCESSION   DASRPQ010001283 DASRPQ010000000
VERSION     DASRPQ010001283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2592
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1411977"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..305)
                     /locus_tag="VFD73_14720"
     CDS             complement(<1..305)
                     /locus_tag="VFD73_14720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75251.1"
                     /translation="MVTSTAAAQVSGGATVSPTGSKSITGGQFEEIVRVLRPLVESYG
                     VSGMEAPVRATVERLLPRQIRRETDSAGNLWVTLGQGDPTVVFIAHLDEVGFRVSAI"
     gene            complement(335..1312)
                     /locus_tag="VFD73_14725"
     CDS             complement(335..1312)
                     /locus_tag="VFD73_14725"
                     /inference="COORDINATES: protein motif:HMM:NF017181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75252.1"
                     /translation="MGRRAAFGAVVLLLLLSRAAPAQTSDPDLIQLAVRLASWTAVTG
                     YEQRMVDSILTLLPQAQRDRAGNAVLRLGGNGPARRLVACPLDEIGYVIGGMRPDGYL
                     TLRRTGRPVSALFDQQLEGQRVSIQGARSLLPGVVAVRSIHLSRGRDDSASAPFTVDD
                     ALIDVGAASAAQVKALGVQVLSPVTLVKRPHRYGKTLLAATDAGRRAACAALIVAARA
                     SRLRAKLLPPVTVAFLAEDRLGARGLATLSNADGPFQETIIVDGTGGRLGALDLGIDA
                     ETAARWPGLGPVKRWSLPVKYAGTAVETVSLLDADSLRQKLMDWIGGDR"
     gene            complement(1453..1809)
                     /locus_tag="VFD73_14730"
     CDS             complement(1453..1809)
                     /locus_tag="VFD73_14730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75253.1"
                     /translation="MLPAALEQERLFVAERLLSEIERRHGLPHPVNREIHPVIVERFL
                     IAYLPETRDGEPAPLALEFAFAPSLTEAVNLLGGIVSETDSGFGAALYIHDLDTGTGG
                     AGSVSDTSSSKREMAR"
     gene            complement(1960..>2592)
                     /locus_tag="VFD73_14735"
     CDS             complement(1960..>2592)
                     /locus_tag="VFD73_14735"
                     /inference="COORDINATES: protein motif:HMM:NF014305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI75254.1"
                     /translation="MSNSLGFAYRFVPGTQAGAVPLLLLHGTGGDENNLIELGRTLAP
                     GSPLLSPRGRVLEHGMPRFFRRLAEGVFDLPDLRFQAKELSSFVQEARTRYDLGKTPP
                     LAVGFSNGANMAAALLLLHPDTLSGAVLFRPMVPLVPDQLPTLNGVPVFIAAGLRDPI
                     VLPAQSQALADLLTSAGAEVTLHWTNGGHALLQDDVDAAERWLSVQSSTS"
BASE COUNT          552 a          815 c          795 g          430 t
ORIGIN      
        1 ttgatagcgc taacccgaaa ccccacctcg tccaagtggg cgatgaagac cacggtggga
       61 tcgccttgtc ccagcgtaac ccacaggtta cccgcgctgt cggtctcgcg tcgaatctgg
      121 cggggcagca ggcgttcgac ggtcgcccgg accggcgcct ccatcccgga cacaccatag
      181 ctctcgacca gtggcctcag gacgcgaaca atctcctcaa actgaccgcc tgttattgac
      241 ttcgaaccgg ttggggacac cgttgcgccg ccggaaacct gggctgcggc cgtggacgtc
      301 accatgctca gagcgagaaa tccagaaaag actttcacct gtcaccgccg atccaatcca
      361 tcagtttctg acgcagcgag tccgcatcca gcagtgatac cgtttccaca gcggtgccgg
      421 cgtacttgac cggaagagac caacgcttga ccggtcccag tccgggccag cgagcggcag
      481 tttcggcatc gatcccgagg tccaaagcac cgagccgtcc tccggtgcca tcgacgatga
      541 tcgtctcctg aaagggacca tccgcattcg agagggtagc cagtcctcgc gcccccaatc
      601 ggtcctcggc gaggaaagca acggtaaccg gaggaagcaa ttttgccctc aatcgggatg
      661 cccgggccgc cacgatcagc gcagcacagg ccgcgcgtcg tccggcatct gtggcggcca
      721 gcaaggtttt accataccgg tgcggccgct tgaccagagt gaccggcgac aacacctgaa
      781 caccaagtgc cttcacctgc gctgccgatg ctgccccgac gtcgatcagg gcatcgtcta
      841 cggtgaatgg ggcgctggcc gagtcatctc gcccgcggct caaatgaatc gagcgaaccg
      901 ccaccacgcc gggaagaagg ctgcgtgcgc cttgaatgct gaccctttgt ccttcgagct
      961 gctgatcgaa gagtgctgag acgggacggc ctgtccgccg aagcgtcagg tatccatcgg
     1021 gccgcatgcc tccaattaca tagcctatct catccagggg acacgcgacc agccgcctcg
     1081 ccggaccatt cccgcccagg cgcagaacgg cgtttcccgc ccggtctcgt tgagcctgtg
     1141 gcaggagcgt cagtatgctg tcgaccatcc gctgctcata gccggtgact gctgtccatg
     1201 atgccagcct gacggccaac tggatgagat cgggatccga ggtctgggct ggggcggccc
     1261 gagagagcag caacagcaga acgacagcgc cgaacgccgc ccgacgaccc attagaactg
     1321 gagagcgtga gagatcaagg ggagtgtttt ctggggggac atctgcgctg ccgttgaggg
     1381 cgacgtgaaa agcgctcacc ccgcccgcaa cgacaggacc gcggtatagg accgcgtgcg
     1441 atcatttgag tgctacctgg ccatctccct cttggaggac gaggtgtcgc taacggaacc
     1501 ggccccgccg gttcccgtat cgaggtcatg aatgtagaga gcggcgccaa agccgctatc
     1561 ggtttcgctg acgatcccgc ccagaaggtt caccgcctcg gtcaagctag gagcaaaggc
     1621 aaactcgaga gccaacgggg caggttcacc atctctggtt tcgggcagat aggcgatgag
     1681 aaagcgttcg acgatgaccg gatgaatttc tcgattaact gggtgcggaa ggccgtggcg
     1741 gcgttcaatc tccgacagga ggcgctcggc cacgaagaga cgctcctgtt cgagggcggc
     1801 tggaagcatc acatagttcc tcacgggaag agccggcgca tcttggcgag tgcgggcggc
     1861 aaggtaagag tgtggcgacg ccattcgcag gagactacac cacagtcaac caatgcgaag
     1921 tatggatcac cgacgtaaga gaagaaagac cgaaccaggt taactggtgg acgactgcac
     1981 cgacagccag cgctcggcgg catccacatc gtcctgcaac aacgcatgcc ccccattggt
     2041 ccagtgcagg gtgacctctg caccggcgct tgtcagcagg tctgccaacg cctgactctg
     2101 cgccggcagc acgatcggat ctctgagacc ggcggcaatg aacaccggca ccccgttcag
     2161 ggtgggcaat tgatcgggga ccaacggcac cattggccga aagagaacgg cgccgctcag
     2221 agtgtcggga tggagcaaga gcagcgcggc ggccatgttc gccccgttgg agaacccgac
     2281 ggcgagtggt ggagtctttc caagatcgta tcgagtgcgc gcctcttgca caaaactgga
     2341 aagctccttc gcctggaatc tgagatccgg aaggtcaaag actccttcag cgagacgccg
     2401 gaaaaaccgc ggcatcccgt gctcgagcac ccgtcctcgc gggctgagca gcggcgagcc
     2461 gggagccaat gtccggccca gttcgatcaa attattctca tccccaccgg tcccgtggag
     2521 gagcaggaga ggcaccgctc ccgcttgagt ccccggaacg aaccggtagg caaagccgag
     2581 agagttgctc at
//
LOCUS       DASRPQ010001284         1065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2047875, whole genome shotgun sequence.
ACCESSION   DASRPQ010001284 DASRPQ010000000
VERSION     DASRPQ010001284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2047875"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..284)
                     /locus_tag="VFD73_14740"
     CDS             complement(<1..284)
                     /locus_tag="VFD73_14740"
                     /inference="COORDINATES: protein motif:HMM:NF013412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HZI75255.1"
                     /translation="MAQQGSLELLNDPVAKALLGSANPARLAYTWMDGSPRVVPIWFH
                     WTGGQLVLGSPPKAPKLRALAADPRAAVTIDGNEWPHKVLLVRGRASVEML"
BASE COUNT          191 a          363 c          324 g          187 t
ORIGIN      
        1 agcatctcca cactcgctcg tccgcggacg agcaggacct tgtgcggcca ctcattgcca
       61 tcgatcgtga ccgccgcccg cgggtccgcg gccagcgccc tgagcttggg cgccttaggg
      121 ggcgaaccaa ggacaagctg accaccggtc cagtgaaacc agatcgggac gaccctggga
      181 ctaccatcca tccaggtgta ggccagcctc gccgggttag ccgaccccag cagtgccttc
      241 gcaacaggat cattgagcag ttcgagactg ccttgctgtg ccatctcaac ccctcccttg
      301 acgactggat ctcagacgtg cgatcaggcg gagtcaccgg gccaccctcg acctgcactg
      361 ggccacctgg ccgtgctctt cgtccctgcc cagaaaggac ccctggctgc cctccaggat
      421 gatcgcgcgg cgcattccgc gcaagcgaag gcagaaggtc tcaatgagac gaatcaatcc
      481 catcgaatgg accagcggct gctcgcactc cccggcaact ggggccggtg caagatcatg
      541 tgcagccgct aactgcatcc cgcaaacgct gggagccgcc gaggatgctg ctcgcccacc
      601 gactccccgc gcaacccaac attccgaaag gcacggcaat ggtaacgctg aggcagttct
      661 ccagcatctg cctttagcga gtacgcgcgc ggtgaccagt gccgggatcg taacagaacg
      721 tgacgggaac actcggtcac caagctccct atcgacgaat atttgcggct ctcctcgcat
      781 tggccttaac gcgatggcga gtacagatca gccatttcgg agcggtccaa gtcggccggg
      841 cgtatcggcc ttctggtgac ggtcctgcct ggcagtcccg gggacgcgtt tggcggcggg
      901 tttgggcgcc tagctgatgg ctccggtatc gccggctctc gtcgggccgg ctgggcgggt
      961 gggttcaggt gatgcttccg ccagcgcgta ctcaacggcg cggctgcctc ccagggactg
     1021 tccccgtgtc caggcctgct cgaatgccgc atctcccatg cggga
//
LOCUS       DASRPQ010001285         5254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1412277, whole genome shotgun sequence.
ACCESSION   DASRPQ010001285 DASRPQ010000000
VERSION     DASRPQ010001285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5254
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1412277"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1008
                     /locus_tag="VFD73_14745"
     CDS             <1..1008
                     /locus_tag="VFD73_14745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75256.1"
                     /translation="PKAAKAGTKSEGKPRRRKKAAAEPRSRGIPPDAIGSGAHPAELT
                     RLAEAIQADGGTVLAPYKDPLGGHWQLFAALPIDLVEPTPYQRDLSKPHVERLSGAMD
                     RLGRYLDPMIVVRGEAPGSEDSRAAHPYWTPNGNHRLAALKRLGARSVVAIVVPDIEV
                     AHRILLLNTEKAHNLRERSLEVIRLAELLAQTENRPERDFEIEFEEPALLTIGLCYQE
                     NGRFAGGAYHPVLRRAEKWLGTALPKALETRRERAARVLELDAAVTEAMKKLKERGFD
                     SPYLRPFVVARINPLRFKRGGNPDVDETLDTMLAAARRFDAGRVRADQVAKAGGAAEE
                     S"
     gene            1086..2099
                     /locus_tag="VFD73_14750"
     CDS             1086..2099
                     /locus_tag="VFD73_14750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75257.1"
                     /translation="MEIGSMLSLNRISPLSVVIPALLAGTVLACNRSSSSATRTGTPA
                     DEHALAESAAVYEREGAMFRKTGETPNLQNPESARYDKDLDVWFVSNVNGLPSAKDNN
                     GYISRLRPDGTPYNVKFIEGGKKGVTLNAPKGLAINGDTLWVADIDAARAFNKRTGAV
                     IANVNIRGRAKFLNGSAVGPDGAVYMTDTGIIFGPKGEMSHPGPDQVFRVRANGDATV
                     ALTSPKLQGPNGITWDQREERFVIVSFAGKGIFGWKPGDKDVQTLGNGPGQQDGVVVL
                     PDGRIVVTSWADSSLFVLQNGKTTTVARGVASPADIDLDPKDSRIAVPQLMANAVQFW
                     EVP"
     gene            2096..2914
                     /locus_tag="VFD73_14755"
     CDS             2096..2914
                     /locus_tag="VFD73_14755"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HZI75258.1"
                     /translation="MIHLSARGFASYAAVALLAAMVGAAGMWLHASRRGTKPGLNPVT
                     THGEWVKIKKGNETIRAYVAYPERKTKAPAVIVIHEIFGLTDWEPTVADRLAKAGYVA
                     IVPDLLSSKHGESPKDPDQGRKLVGDLEPERVTADLNATYDYVNGLPAVEKDHIGTIG
                     FCWGGGQSFRYATNNPNLKAVVVAYGPPPDSAAIKRIKAPVLGVYGENDERIDATLPD
                     VAAKMQSAGKTFNYEVYPGTGHGFLKPGRQGSDTPQVDRAWKRILEFYRARLGK"
     gene            2936..4531
                     /locus_tag="VFD73_14760"
     CDS             2936..4531
                     /locus_tag="VFD73_14760"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HZI75259.1"
                     /translation="MLSLLLLLQQTPSLAARADTIQPVHDALHYDVTLVPSDSGTHVL
                     AEVQTTWRLRSSEPVEMELDSAMRVVRVLMDGKENTRLSRTLYARSSEEIEVPHEKHA
                     GDTVVTRVRYHGFVRDGLIIGTNQYGDRTIFADNWPDRAHLWLASQDHPSDKATVAFH
                     IQAPIQDQVIANGVLEKIDTLAYGHVVWHYRMDQPIPVYTMVVGIGRLARTQLSDSSC
                     RGKCVPVSVWTYPRDSSYAVNGPFRRARQIVDYFTELIGPFPYSTLAHVESSTRYGGM
                     ENSTAIFYDEKRYRQANMDEGIVAHETAHQWFGDAVTEADWHHLWLSEGFATYLAALW
                     QLHADGDSAFQAVMSKAAAEIFGAKETARPVVDTAARDLVGLLNTNNYQKGSWVLHQL
                     RGLVGDSAFYNGLRGYYREYRDSTALSADFARVMSQAAKQDLHWYFRQALLQPGFPML
                     DIAWKHGGKKLTLEVRQTQPAEWGVYRLPHLILVVDGTPVRIDVEGRESRIVVDGIAH
                     KPRKIVVDPKGWWLLKANVSGER"
     gene            4589..>5254
                     /locus_tag="VFD73_14765"
     CDS             4589..>5254
                     /locus_tag="VFD73_14765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="LpqB family beta-propeller domain-containing
                     protein"
                     /protein_id="HZI75260.1"
                     /translation="MVSWVAMPAAWCLLLTLCFALACGTIPPLRGKIEVGRESFAVFV
                     GGRGPNGDLYAVRADGGPAIPITFTTVAELRPALSPDGSQVAFLRGRSLRDSTPASLW
                     VMNLVNGAERELRLPKGAAAPEQLAWSRDGSALIVRAGSAWYRITAPPGRPAPVQLPV
                     DEQAAAESSLAVLVGDPVFARVVPCKRPEDLCVIPRSGKEAILAQAARDPVRWGGDSV
                     AFFV"
BASE COUNT          990 a         1637 c         1680 g          947 t
ORIGIN      
        1 ccgaaggcag cgaaggcagg aaccaagtcg gaaggcaaac ctcgccgcag aaagaaggcg
       61 gccgcggagc cgcgctcgcg cggaatccct cccgacgcca tcggctctgg tgcccatccc
      121 gccgagctga cccgactggc agaggcaatt caggctgatg gcggcaccgt cctcgcgccc
      181 tataaagatc cgctgggcgg tcactggcag ctctttgccg cgcttcccat cgatctggtc
      241 gagcccacgc cgtatcagcg cgatctctcc aagccccacg tagagcgact ctccggtgcc
      301 atggaccggc tgggccgata tctggatccc atgatcgtgg tccgcggcga ggctccaggt
      361 tcggaggaca gccgcgcggc tcacccctac tggacgccga acggcaacca tcggctcgcc
      421 gccctcaagc gcctgggggc caggtcggtt gtggccatcg tggtaccgga catcgaggtg
      481 gctcaccgga ttctgctgct caacaccgag aaggcgcaca atctgcgcga gcgctcgctg
      541 gaggtcattc gactcgccga gctgttggcc cagaccgaaa accgacccga gcgagatttc
      601 gagatcgaat tcgaggagcc ggcgctgctc accatcggac tttgctatca ggagaacgga
      661 cgatttgccg gtggcgccta tcacccggtg ctccggcggg cagagaagtg gctcggaacg
      721 gcgttgccca aggcactgga aacgcggcgc gagcgagcgg cgcgggtcct cgagctcgac
      781 gcggctgtca ccgaagcaat gaagaagttg aaagagcgag gcttcgatag cccctacctg
      841 cgaccgttcg tggtcgcacg catcaatccg ctccgattca agcgtggcgg caatccggac
      901 gtagacgaga cgctcgacac catgctggcg gccgcccgcc gattcgatgc cggacgggtc
      961 cgcgccgatc aggtggccaa ggcaggaggc gccgcggagg agtcctaggc cgatcctggc
     1021 ttgccatctc cataccttag tactcttgcc gcccgctgcc ccgcttatac ttgcttttcc
     1081 tctgagtgga gatcggctcc atgttgtctc tgaatcgtat ttctccattg agtgtcgtta
     1141 ttcccgcatt gctggctgga acggttctcg cctgcaaccg aagcagctca tccgccaccc
     1201 gaaccggtac ccctgccgat gagcatgcac tggctgagtc tgccgcagtg tatgaacgcg
     1261 aaggcgccat gttccggaag accggcgaga ctccgaacct gcagaatccc gagtcggccc
     1321 ggtacgacaa agacctggat gtctggttcg tgtccaacgt gaacggattg cccagcgcca
     1381 aggacaacaa cggctacatc agccggcttc ggcccgacgg caccccgtac aacgtcaagt
     1441 tcatcgaggg cgggaagaaa ggcgtgactc tgaacgcacc caaggggctc gctatcaatg
     1501 gggataccct ctgggtggcc gacatcgacg cggcccgtgc cttcaacaag cgcaccggcg
     1561 cggtcatcgc caacgtgaac atccgcggcc gcgccaaatt cctgaacggc tcggcggtgg
     1621 ggccggatgg agccgtctac atgaccgaca ccggcatcat ttttggtccc aagggcgaga
     1681 tgtcgcatcc tggtcccgac caggtgttcc gggtgcgcgc caatggcgac gctacagttg
     1741 cgctgacctc tccgaagctg caggggccca atgggattac ctgggatcag cgggaggagc
     1801 gcttcgtgat cgtctccttt gccggcaaag gcatcttcgg ctggaagccc ggtgacaagg
     1861 acgtgcaaac cctgggcaac ggccccgggc agcaggacgg cgtcgtagtg ttgccggacg
     1921 gccgaatcgt ggtgacgagt tgggctgatt ccagcctgtt cgtgctgcag aatgggaaga
     1981 cgaccaccgt ggcacgaggg gtcgcgagtc cggccgatat cgatctcgat cccaaggatt
     2041 cccgcatcgc cgtgccgcag ctcatggcga acgcggtcca gttctgggag gtgccatgat
     2101 tcacctcagc gcgagagggt ttgcctcgta cgccgccgtc gctctgctcg cggcaatggt
     2161 cggagccgcc ggcatgtggc tgcacgccag ccgcagagga acgaaacccg gactcaaccc
     2221 ggtgacgact catggcgaat gggtaaagat caaaaaaggc aatgagacga tccgggccta
     2281 cgtcgcctat cccgagcgga agaccaaagc gcccgcggtg atcgtcattc acgaaatttt
     2341 tggcctgacc gactgggagc ccacggtggc ggatcggctg gccaaggcgg gatacgtcgc
     2401 catcgtcccc gatctgctct cttccaagca cggtgagtcg cccaaggatc cggaccaggg
     2461 ccggaagctg gtgggagatc tggagcctga gcgggtcacc gccgatctga acgccaccta
     2521 tgactacgtc aatggcctgc cggccgtgga gaaagatcac atcggcacga tcggattctg
     2581 ctggggtggc ggacagagct ttcgctatgc aacgaacaac ccgaacctga aggcagtcgt
     2641 cgtggcctac ggtcctccgc ccgattcagc ggccatcaag cggatcaagg ccccggtact
     2701 cggcgtctac ggggaaaacg acgagcggat cgatgcgacc ttacccgacg tcgcggccaa
     2761 gatgcagtcc gccgggaaga cgttcaacta cgaggtgtac cccggtaccg gtcacggatt
     2821 cctgaaaccg gggcgacaag gctcggacac tccacaagtc gacagagcgt ggaagcggat
     2881 tctggaattc tatcgggcgc ggctggggaa gtaggaatct gcttaccgtc tcctgatgct
     2941 ttcactgctt ctgttgctgc agcaaacccc ttcgcttgcc gcgcgggccg acaccattca
     3001 accggtgcac gacgcgctgc actacgatgt cacgctcgtt cccagtgaca gcggcaccca
     3061 tgtcctggcc gaggtgcaga cgacctggcg gctccgttcc agcgagccgg tcgagatgga
     3121 gctcgactcc gcgatgcggg tggtccgggt gttgatggat gggaaagaga acacccggct
     3181 ctcccgaacc ctgtacgccc ggagcagcga ggagatcgaa gttccccacg agaagcatgc
     3241 cggtgacacc gttgtcacgc gggtgcgcta tcacgggttc gtgcgcgacg ggctgatcat
     3301 tgggaccaat cagtatggcg accgcaccat ctttgctgac aactggcccg accgcgccca
     3361 cctctggctc gcgtcccagg accatcccag tgataaggcg acggtagcat ttcacattca
     3421 ggcgccaatc caggatcagg tcattgccaa cggtgtgctg gagaagatcg atactctcgc
     3481 ctatggccac gtggtctggc actaccgcat ggatcaaccg atccccgtct acaccatggt
     3541 cgtgggcatc ggccggctgg ctcgtaccca gctttccgat tcaagctgtc gaggaaagtg
     3601 cgtcccggtt tcggtctgga cctacccgcg cgactcgagc tatgcggtga acgggccctt
     3661 tcgccgggct cggcagatcg tcgactactt cactgagctc attggaccat tcccctattc
     3721 gactctggct cacgtcgagt cgagcacccg ctacggcggc atggagaaca gcaccgccat
     3781 cttttacgac gagaaacgct accgtcaggc gaatatggac gagggcattg tagcccacga
     3841 gacggcgcat cagtggtttg gtgatgcggt gaccgaggct gactggcacc acctttggct
     3901 ctcggaggga ttcgccacct atctagcagc gctttggcag cttcatgccg atggagacag
     3961 tgccttccag gccgttatga gcaaggcggc cgccgagata ttcggagcga aagaaaccgc
     4021 tcggcctgta gtggataccg cagcacgcga cctggttggc ctgctcaaca ccaacaacta
     4081 tcagaagggg tcctgggtgc tccatcagct ccgcgggctg gtgggagata gcgcctttta
     4141 caatggtcta cgtggctatt atcgcgagta tcgcgacagt actgcgctca gtgcggattt
     4201 tgcccgcgtc atgtcccagg ctgccaagca ggatctccac tggtatttcc gccaggctct
     4261 gctccagccc ggtttcccca tgctggatat cgcatggaag catgggggga agaagctcac
     4321 gctcgaggta cggcagactc agccggcgga atggggggtg taccgtctcc cccatctcat
     4381 actggtggtg gacggcactc cggtgcggat cgacgtcgag gggcgggaga gccggatcgt
     4441 ggtggacggg attgcgcata agcccaggaa aatcgtggta gacccgaaag gctggtggct
     4501 gctcaaggca aacgtgagcg gcgagcggta agcggtgcgc cggtctgatc tcgacataat
     4561 ctgcaacgtg cccagtcgac ctgtccgctt ggtctcgtgg gtagcgatgc cggcggcctg
     4621 gtgtctcctg ctcaccctgt gttttgcctt ggcctgcggc acgattcctc cgctgcgcgg
     4681 gaaaatcgag gtcgggcggg agtcgtttgc ggtgttcgtc ggcgggcgtg ggccgaacgg
     4741 tgatctgtac gcggtacgag ccgatggggg gcctgccatt cccatcacct ttaccaccgt
     4801 ggccgagctc aggccggcgc tctcgcccga cggcagccag gtggcgtttc ttcgcggccg
     4861 atcgctgcga gactccacgc cggcgtcgct ctgggtcatg aacctggtga acggagcaga
     4921 gcgggagctc cggcttccga aaggagcagc ggctcccgag caattggcat ggagtcggga
     4981 cggcagcgcg ctcatcgtcc gcgccgggag cgcatggtat cggatcacgg cgccccctgg
     5041 acgacctgct cccgtccagc tcccagttga cgagcaagca gccgcggaat cgagcctggc
     5101 agtcctggtg ggcgatccgg tcttcgctcg ggtcgttccc tgcaagcggc ccgaggatct
     5161 ctgcgtcatc ccgcgcagcg gcaaggaagc gatcctggcg caagcggcca gagacccggt
     5221 gcgatggggg ggcgactcgg tggctttctt tgtg
//
LOCUS       DASRPQ010001286         1472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3307876, whole genome shotgun sequence.
ACCESSION   DASRPQ010001286 DASRPQ010000000
VERSION     DASRPQ010001286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1472
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3307876"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(181..546)
                     /locus_tag="VFD73_14770"
     CDS             complement(181..546)
                     /locus_tag="VFD73_14770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75261.1"
                     /translation="MTTALANIALGTDNHPKGATPKLESVGQDVDERFYMLATFCFDL
                     SRKLKYICLALREHWPDADPAFAKRILQDNEFINPGPGSLSWEEMAIRAEEVMKALWQ
                     EIKQEHFEENLREIAARAS"
     gene            complement(609..>1472)
                     /locus_tag="VFD73_14775"
     CDS             complement(609..>1472)
                     /locus_tag="VFD73_14775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75262.1"
                     /translation="RVDDPWRPMWQALVTIQFGSARERSAALSRLRTLERPALAQVVI
                     SAMHGGRDPALADTVAGFLLGADRTPDDRRRGAQYRLVALAAQGRSIDAMNAWKAVAG
                     DESFDAWIVQAALAGFPTADLAKPMYDWARRQVAARRSPDFRRPYWDEVRESFDGLVD
                     GASLAGDSAEVTGLLRQIEQAPRGSPTDPGPETLRASLRARLALLAADTTRAIDLLQT
                     AVSRIAEPWTANFPLTAMGPQRYLLAELLGSQGNAAQARRWQDSFANSWAITDVLYLA
                     RMGRLERRSIR"
BASE COUNT          268 a          456 c          462 g          286 t
ORIGIN      
        1 gatgtgaaaa ccttgcaaca ggtggtttgg gtcatgaagg gaggagcggt agtgaaggat
       61 gcggcgaggt agcgggcagc ggcagcacgg ggatacagaa agagatccgg acagacgcat
      121 tgcttgcctc agggtcacac cgccccagac cgagcttacg gaccgacctt tttgtgcccc
      181 ctaggaagct ctcgctgcga tctctcgcag gttctcctcg aagtgctcct gtttgatttc
      241 ctgccacaac gctttcatca cctcctcggc tcgtatggcc atctcttccc aggagagaga
      301 cccggggccc ggattgatga actcgttgtc ctggaggatg cgcttcgcaa atgctggatc
      361 ggcatccggc cagtgttctc tcagggccag gcagatgtac ttcagcttgc gggagagatc
      421 gaagcaaaaa gtggcgagca tgtaaaaccg ctcgtcgaca tcctgcccta cggattcgag
      481 cttgggggtg gctcccttcg gatggttatc cgtgccgagc gcgatgttcg cgagcgctgt
      541 ggtcattgta tcctcgtatt tggggttgaa ggtataacct ggcgattgcc gctcctgttc
      601 gtagcggctc agcggatgga cctgcgctcc aaccgaccca tccgcgccag gtacaggacg
      661 tcggtgattg cccaggagtt ggcgaatgag tcctgccacc gtctggcctg cgctgcgtta
      721 ccttgacttc caagcagctc ggcaagcaag taccgctgcg gacccatggc cgtaagcgga
      781 aagttcgcgg tccacggctc ggcgattcgg gacaccgccg tctgcagcaa gtcgatcgcc
      841 cgggtggtat ctgctgcgag gagcgccaga cgggcgcgaa gtgaggctcg aagggtctcc
      901 ggtcccggat cagtggggct tcctcgagga gcttgctcga tctggcgcag cagtccggtc
      961 acctcggcgg aatcgccggc caagctcgca ccgtctacca acccatcgaa gctctcgcgg
     1021 acttcgtccc agtaggggcg ccggaaatcc ggagatcgtc tcgccgccac ttggcgccta
     1081 gcccagtcat acattggttt cgcgagatcg gctgtgggga agccggccag cgccgcctgg
     1141 actatccaag catcgaatga ctcgtctccg gcaaccgcct tccatgcgtt catcgcatcg
     1201 atcgagcgac cctgtgcggc caaggcgacg agacggtact gagctcccct gcgtcgatcg
     1261 tccggggtcc ggtcggcccc gaggaggaat cccgcaaccg tatctgccag cgctgggtcc
     1321 cgtcctccat gcatagcaga gatgacgacc tgggccagtg caggtcgctc cagcgtccgg
     1381 agtcggctca aggcggccga tctctcccgt gccgaaccga actgaatcgt gacgagcgcc
     1441 tgccacatcg ggcgccaggg atcgtccacc cg
//
LOCUS       DASRPQ010001287         1158 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1412771, whole genome shotgun sequence.
ACCESSION   DASRPQ010001287 DASRPQ010000000
VERSION     DASRPQ010001287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1412771"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..933)
                     /locus_tag="VFD73_14780"
     CDS             complement(<1..933)
                     /locus_tag="VFD73_14780"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AfsR/SARP family transcriptional regulator"
                     /protein_id="HZI75263.1"
                     /translation="MRIQMLGPFQLMEGGRQITVGGVRQRTVLADLLLHANKVIPSER
                     LLVDLWGEDSPPSAANALQAAISRVRRVLPPDRLITTGPGYMLRIFPAEFDIAEFEQL
                     FLQGRNALAAAAEAEAVELLDRAMTLWRGPPLADFRYEPFAQAEIARLEELRLACLEE
                     RNEAELALGSAGALTAELGRMVADHPLRERLRGQLMLALYRSGRQTEALGTYREFRST
                     LREELGLEPASALRDLETAILRHDPVLAPGSATGGTPPSRRPVTVLCVALQVTLSSGV
                     ALDPEAHGVVSEHVVTGLTAVLERHGGTLAATDGE"
     gene            complement(953..>1158)
                     /locus_tag="VFD73_14785"
     CDS             complement(953..>1158)
                     /locus_tag="VFD73_14785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75264.1"
                     /translation="AIGGNGFSDSLRTHWVPLYWSARLPKLAPSRPRNRSRRSNSDAP
                     GGEIELVFDVAWFDNGLWVLTVR"
BASE COUNT          195 a          392 c          379 g          192 t
ORIGIN      
        1 ctcgccatcg gtggccgcca gtgttccgcc atgccgctcg aggacggctg tcaggcccgt
       61 gaccacgtgc tcgctcacga cgccgtgggc ctcggggtcg agcgccacgc ctgagctgag
      121 cgtcacctgc aatgcgacgc agagcaccgt caccggcctg cgtgacggtg gcgttccgcc
      181 ggtggccgat ccaggcgcga ggaccgggtc atggcgcagg atcgccgtct cgagatcgcg
      241 aagcgctgac gccggttcca ggcccagctc ttccctgagg gtgctccgga actcgcggta
      301 ggtcccaagc gcctcggtct gccggccgct gcggtagagg gcgagcatga gctggccacg
      361 aagacgctcc cgcagcggat gatcagctac catccgcccc agctcagccg tgagtgcgcc
      421 tgccgagccc agcgccagtt ctgcttcgtt ccgttcttca aggcaagcca gtcgcagctc
      481 ttccagccgg gcgatctcgg cctgcgcgaa gggctcatag cggaaatcgg ccagcggcgg
      541 accgcgccag agcgtcatcg cccggtcgag caattccacg gcttccgctt cggctgcagc
      601 ggcgagagcg ttacggccct gaaggaaaag ctgctcaaac tcggcgatat cgaactctgc
      661 cgggaagatt cggagcatat agcccggacc cgtagtgatg aggcggtccg gcggcagcac
      721 ccttcgtacc cgtgagatcg ccgcctggag cgcgttcgcc gcgctgggcg gggagtcctc
      781 tccccacaga tcgaccagga gccgctcgct cgggatgacc ttgttggcgt gtaacagcag
      841 gtcagcgagc acagtgcgct gtcggactcc gcccactgtg atctgccggc cgccctccat
      901 gagctggaaa gggccgagca tctgaatccg catcgcctgc cccccggggg tgtcagcgga
      961 ctgtcagcac ccaaagtcca ttgtcgaacc atgcgacatc gaatacaagc tcaatttccc
     1021 ctcccggcgc atcggagttg cttcgacggc tgcggttccg gggcctggac ggagcgagct
     1081 tggggagcct ggcggaccaa tagaggggga cccaatgagt tcggagactg tcgctaaatc
     1141 cgttcccgcc tatagcgc
//
LOCUS       DASRPQ010001288         1262 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2341304, whole genome shotgun sequence.
ACCESSION   DASRPQ010001288 DASRPQ010000000
VERSION     DASRPQ010001288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1262
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2341304"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            370..1014
                     /locus_tag="VFD73_14790"
     CDS             370..1014
                     /locus_tag="VFD73_14790"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HZI75265.1"
                     /translation="MRGSSWPARVLPLGGILLIAGTQSLAAQRISIAPNIGVYVPTTE
                     LVKAANGEEFKQEISLTVGGRLGVQLTQRFGLEFTGAYAPSDLKITQSGFGDQNQDAN
                     VFTGSGRVSYQLVPLTSPIAFMITAGVGVVNRSGDFYAGMQDKTDIGGTAGASARFRL
                     GKLLRIQLSAEDYLYKPKGDIPGFTASDEKKTQNDIHLSLGLGIPLLGLGQMGQ"
BASE COUNT          249 a          390 c          383 g          240 t
ORIGIN      
        1 agatcatggg ttcgcggtgc acaattcttg ccctccgggt ccgtccaccc ctacaaccat
       61 atgcggagcc agcgcgatgc gcggagccca gcggttgctc tagtcagccc ttgcgaacat
      121 ggccctggtg tcgtcctcaa ccagcccggc acacgcacag ggcaagatga agaacaagca
      181 ctacgccgta accagtagca gagccgtgag tgtcactcgc gcagtcctat cgaccgcggg
      241 tacaacgtcg tgagaatcga gcgcgctggt cccactcagg tagtctatta tcgggcgggc
      301 aacataacat cgatctcaag ctccagatgt agcgtgacac ccttcccctg gatttcaacc
      361 ggaggtccaa tgcgtggcag ctcgtggcca gcgcgcgttc tgccgcttgg tgggatactg
      421 ctcatcgctg gcacccaatc gctcgcggca cagcgcatca gcatcgcgcc gaacatcggg
      481 gtttacgtac cgacgacgga gctggtaaag gcggcgaacg gtgaggagtt caagcaggag
      541 atcagtctga cggtaggtgg tcggcttggc gttcagctga cccagcggtt cgggctcgag
      601 ttcaccggcg cctacgcgcc gagtgatctg aagatcaccc aatccggatt cggcgaccag
      661 aaccaggatg ccaacgtgtt taccggcagc ggtcgagtca gctaccagct cgtgccgctc
      721 accagcccca tagcgttcat gatcacggcg ggagttggcg tggtgaaccg gagtggcgac
      781 ttctacgcag ggatgcagga caagaccgac atcggcggca ccgcaggcgc ctcggctcgc
      841 ttccggctag gcaagctcct gcgcatccag ctgagcgcgg aggattacct ctacaaaccc
      901 aagggtgaca ttccggggtt caccgcttcc gacgaaaaga agacgcagaa cgacatccac
      961 ctgtcgctcg gactgggcat tccgctgctg gggctggggc aaatgggcca gtagtccttc
     1021 tccaaggact cgactccaag ggcggcttcg cgttgcggag ccgcactcgg ctttggtgac
     1081 tgggttcaca ctggggtacc tcctacttca cagcgactct cctggcccgg aggtattgtc
     1141 cgggcagccc gggacgaccc ggcgctgcac tccgtgcgtc agttctgtgt gcaataccgc
     1201 agctttctgt cttcaacatg ggagtgtggt atgtccattc gaaagctcac ggctttggta
     1261 cc
//
LOCUS       DASRPQ010001289         2219 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1412910, whole genome shotgun sequence.
ACCESSION   DASRPQ010001289 DASRPQ010000000
VERSION     DASRPQ010001289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2219
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1412910"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1025)
                     /locus_tag="VFD73_14795"
     CDS             complement(<1..1025)
                     /locus_tag="VFD73_14795"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI75266.1"
                     /translation="MTRWGRFAGSPLWPMLWKELVQLRRDRPTLGMMLGIPALQLALF
                     GYAIQTEVRHLPTVVLDESHTAESRRLVEVFRNSGNFDVVELVPSRAAMKDRMERGEA
                     SAALIIPPDYLRQIKRQRGAVAQVIVDAADPLASSAALSAAVQAGVARSQELARTEGG
                     PPPPLEIRVRPWYNPGLRSAVYIVPGIIGVLLSMTLVLITSMSIVRERERGTLEQLIV
                     TPIDKTSLMLGKILPFLLIAYVQITVILVLGRLLFQVPILGSLPLLYLLSFSFIVASL
                     ALGLLMSTLAKSQVQAMQLSFMFLMPNILLSGFMFPRQAMPAPAQWIGAALPLTYFLQ
                     ILRGVLL"
     gene            complement(1022..1780)
                     /locus_tag="VFD73_14800"
     CDS             complement(1022..1780)
                     /locus_tag="VFD73_14800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI75267.1"
                     /translation="MSAEPQNGAAVVTHGLTKSFGPLVAVDALNLSIRRGEVFGLLGP
                     NGSGKTTTIRMLCGLMEPSAGSAQVVGFDVAKEPEQIRRRIGYMSQRFGLYDDLTVEE
                     NIRFYATIYGLHGAQRSRRIGELGDELDLRPRIDQLAGTLSGGWKQRLALACAIAHRP
                     AMLFLDEPTAGVDPASRRLFWQKIHGLAAQGTTILVTTHYMDEAERCERLAFLSRGHL
                     IAIGTAAEVRAQFQQPTIEDVFIELQRRDEGATV"
     gene            complement(1777..>2219)
                     /locus_tag="VFD73_14805"
     CDS             complement(1777..>2219)
                     /locus_tag="VFD73_14805"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HZI75268.1"
                     /translation="AEVASARAALAAVQAVAQDLVLTAPVDGIVISRNAEPGEQLAAG
                     QSAMTLGESAAPFVRVYIPTRQLPRVRQGQHAVARLDGFPNRPIPGQVVAINPQAEFT
                     PRVALTETERADLLFGVKVALSDTTGLLRPGLPATVTLEDSKPR"
BASE COUNT          393 a          723 c          734 g          369 t
ORIGIN      
        1 ttgagcaaca cgccccgaag aatctgcagg aagtaggtga gcggcagcgc cgcgccgatc
       61 cactgcgcgg gcgcgggcat cgcttggcgg ggaaacatga atccggacag caggatgttg
      121 ggcatcagga acatgaagct cagctgcatc gcctgcacct ggctcttggc cagggtggac
      181 atgagaagtc ccagtgccag actcgccact ataaaggaaa agctcagcag gtagagcagg
      241 ggcaggctcc ccagaatcgg cacctggaac aggagccggc cgagcaccag aatgactgtg
      301 atctgcacgt aggcgataag aaggaaaggc aggatcttgc ccagcatgag gctggtcttg
      361 tcgatcgggg ttacgatcag ttgttccagg gtgccccgct cccgctcccg tacgatcgac
      421 atgctggtga tcaacaccag cgtcatcgat aatagcacgc cgatgattcc cggtacgata
      481 tacaccgcgc ttcgaaggcc tggattgtac cagggccgta cccgaatttc gagcggagga
      541 ggtggtcctc cctccgttcg ggccagctcc tgcgatcggg ccactccggc ctgaaccgct
      601 gctgagagcg cggcggagga ggccagcgga tcggccgcgt ccacgatgac ctgggcgacg
      661 gcgccgcgct gtcgcttgat ttgcctgagg taatcaggcg ggatgatcag cgctgcgctc
      721 gcctcccctc gctccatccg gtccttcatg gcggctcggc tcggcaccag ctccacgacg
      781 tcgaagttgc cgctgttccg gaacacctcg accagccggc ggctctcggc ggtatgtgac
      841 tcgtctagta ccacggtggg aaggtggcgt acctcggtct gaatggcata gccgaacagg
      901 gcgagctgga gggccgggat gcccagcatc atgccgagcg tgggccggtc gcgccggagc
      961 tgaaccagct ccttccagag catcggccag agtggcgagc ccgcaaaccg gccccaccgg
     1021 gtcacaccgt cgctccttcg tctcgccgct gcagctcgat gaacacatcc tcgattgtcg
     1081 gctgctggaa ctgggcgcgc acctcggcgg cggtcccgat ggcgatgagg tgcccgcggg
     1141 aaagaaacgc cagccgctca caccgctccg cttcgtccat gtagtgggtc gtcaccagga
     1201 tagtggtgcc ctgcgccgcc aatccgtgga tcttctgcca gaacagacgg cgcgaagccg
     1261 gatccacgcc ggcagtgggc tcatcgagga agagcatcgc cgggcggtgg gcgatggcgc
     1321 aggccagcgc cagccgctgc ttccacccgc cactcagcgt ccctgccagc tgatcgatcc
     1381 gggggcgcag gtcgagctcg tcgcccaact cgccgatgcg ccgggagcgc tgggccccgt
     1441 ggaggccgta aatcgtcgcg tagaatcgga tattctcctc aacggtgaga tcgtcgtaga
     1501 gcccgaaccg ctgggacatg tagccgatcc ggcggcggat ctgctctggc tccttcgcca
     1561 catcgaaccc taccacttgg gcggagccgg cacttggctc catcaggccg cagagcatgc
     1621 ggatcgtggt cgtcttaccc gacccgttag ggccgagcag tccaaagacc tctccccgac
     1681 ggatcgagag gttcagcgca tcgacggcga ccagcggccc gaagctcttg gtgagaccat
     1741 gggtgaccac ggcggcgccg ttctgcggtt cagcgctcat cgaggcttac tgtcctccag
     1801 cgttaccgtc gccgggagtc cggggcgcag taagccggtg gtatcgctga gcgcgacctt
     1861 cacgccgaac aggagatcgg cgcgctccgt ctcggtgagc gccacccgag gcgtgaactc
     1921 ggcctgggga ttgatggcga ccacctgacc gggaatggga cggttgggga agccgtccag
     1981 ccgggcgact gcgtgctggc cctggcgcac tcgcggcagt tgtcgagtgg ggatgtacac
     2041 ccgaacgaat ggtgccgccg actcgcccag agtcatggcg gattgtccgg cggcaagctg
     2101 ctcccccggc tcggcgttcc gggagatcac gattccgtcc accggtgccg tgagcaccag
     2161 gtcctgtgcc actgcctgga ctgctgccag cgccgctcgg gcactcgcca cctcggccc
//
LOCUS       DASRPQ010001290         1101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3308483, whole genome shotgun sequence.
ACCESSION   DASRPQ010001290 DASRPQ010000000
VERSION     DASRPQ010001290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3308483"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..598
                     /locus_tag="VFD73_14810"
     CDS             <1..598
                     /locus_tag="VFD73_14810"
                     /inference="COORDINATES: protein motif:HMM:NF028103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-primase RepB domain-containing protein"
                     /protein_id="HZI75269.1"
                     /translation="GGDLASTDWRHLGRLAGFTNQKPQRRTPGGYAPWVKIVHAHPGL
                     ARNTDGLLQPAIQLPAPAGLPTQGTNPGRSGCAGRLQNTLPPSITSAEATQVYQGWMQ
                     RWRIAERFPQPDWSILDFWIARQLLSQGTPADQVRAILQLASPHFPRRHADPDDYLRR
                     TVARAAFPAPRRTVWTTHATASDPVTFERDCSNSTGGR"
     gene            complement(532..>1101)
                     /locus_tag="VFD73_14815"
     CDS             complement(532..>1101)
                     /locus_tag="VFD73_14815"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZI75270.1"
                     /translation="DSKHSLPVYPNLAGEMVLSGIDQLWVADITYIRLETEFVYLAVV
                     LDRYSRRVIGWELDRTLSDDLSLAALRMALRSRTPGPGLVHHSDRGIQYASGDYTNLL
                     KDNKVRISMSRKGNPYDNATCESFMKTLKYEEVYRQEYRDLAEARASIGQFLNKVYNQ
                     QRLHSALGYLPPVEFEQSLSKVTGSEAVA"
BASE COUNT          211 a          359 c          321 g          210 t
ORIGIN      
        1 tggaggggac ttggccagta ccgactggcg tcatttgggc aggttggccg ggttcaccaa
       61 tcagaagccc cagcggcgca cacccggcgg ttacgctccc tgggtgaaga tcgtgcatgc
      121 ccatccgggg ttggctcgca acaccgatgg attgctgcag cccgcgatcc agttgccagc
      181 accagcaggg ctgccgacgc aggggactaa tccgggcagg agcggctgcg ccgggagatt
      241 gcagaatacc ctcccgccat cgatcacctc cgccgaggcc actcaggtct atcagggctg
      301 gatgcagcga tggcggattg ccgaacgctt tccgcagccc gactggagca tcctggattt
      361 ctggatcgcc aggcagttgc tgtcgcaggg cacacctgca gaccaggtcc gcgccattct
      421 ccagctcgcc agcccacact ttccccgccg ccatgccgac cccgacgact acctgcgacg
      481 cacggtcgca cgtgctgctt ttcccgcacc caggcgcact gtgtggacca ctcatgccac
      541 agcctccgac ccagtgacct tcgagaggga ctgttcgaac tctactggcg gaagatagcc
      601 cagcgctgag tgcagtcgct gctggttgta gaccttgttc aggaattgcc ctattgaagc
      661 tcgcgcctcg gccagatcgc ggtactcctg ccggtagacc tcctcgtact tcagcgtctt
      721 cataaaagac tcgcaggtcg cattatcgta ggggtttcct ttgcggctca tgctgattcg
      781 gaccttgttg tcttttaata aattcgtata gtcgcccgag gcatactgaa tgccgcggtc
      841 ggaatgatgc accaggccgg gcccaggcgt gcggctgcgc agggccatgc gcagcgcggc
      901 caaactgaga tcgtctgaca gcgtgcggtc cagctcccaa ccgatgacac ggcgcgagta
      961 gcgatccaac accaccgcca aatagacgaa ctcggtctcc aagcggatgt aggtgatgtc
     1021 ggcaacccag agctgatcaa tgccactcag caccatctcc cccgccaggt tcgggtacac
     1081 cggcagacta tgcttggagt c
//
LOCUS       DASRPQ010001291         1295 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2967859, whole genome shotgun sequence.
ACCESSION   DASRPQ010001291 DASRPQ010000000
VERSION     DASRPQ010001291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2967859"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..375)
                     /locus_tag="VFD73_14820"
     CDS             complement(<1..375)
                     /locus_tag="VFD73_14820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75271.1"
                     /translation="MTDHALTQTGLAVTRPGGWKGVAADWASDQRAFKNVSWGKAMMW
                     IFLLSDTFIFSCFLLSYMTVRSSTTIPWPNPSEVFALRIGGAEIPLILIAIMTFVLIS
                     SSGTMAMAVNFGYRRDRLKTTVL"
     gene            complement(392..1054)
                     /locus_tag="VFD73_14825"
     CDS             complement(392..1054)
                     /locus_tag="VFD73_14825"
                     /inference="COORDINATES: protein motif:HMM:NF012720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HZI75272.1"
                     /translation="MSVAILFFGALAAIAVWWLSQQRLTAKPWLEEGPIGAVRSADAS
                     SLTPKIGLGIFLAVVGSLFSLFILAYSIRLGMRDWRPLPPPKLLWLNTGVLVLSSLAL
                     HWAQTAARRGEIDSVRTGLLAGGASALAFLVGQLLAWKQLTAAGYYVATNPANSFFYL
                     LTAAHGLHLFGGLVALGRTAAKAWLGFGMEQVRLSVELCAIYWHFLLLVWLVLFTLLL
                     RG"
     gene            complement(1068..>1295)
                     /locus_tag="VFD73_14830"
     CDS             complement(1068..>1295)
                     /locus_tag="VFD73_14830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75273.1"
                     /translation="VFLFNLISSLFKGKPAGGNPWRATTLEWQTPETPPGHGNWGKEL
                     PVVYRWAYDYNVPGAAEDFIPQNQPGPTRTA"
BASE COUNT          253 a          410 c          428 g          204 t
ORIGIN      
        1 caggaccgtg gtcttgaggc ggtcgcggcg gtagccgaag ttgacggcca tggccatcgt
       61 cccgctgctg ctgatcagga cgaaggtcat gatggcgatc aggatgaggg ggatctcggc
      121 gccgccgatc cggagcgcga acacctcgct ggggttgggc caggggatgg tcgtggacga
      181 gcgcaccgtc atgtaggaga gcagaaagca gctgaagatg aaggtgtcgc tcaggaggaa
      241 gatccacatc atggccttcc cccagctgac gttcttgaac gcgcgctggt ccgacgccca
      301 gtcggccgcg acacctttcc agccccccgg ccgggtgacg gccaaccctg tctgtgtcag
      361 cgcatggtcc gtcatttgcc cccgatcctc ttcagccgcg caacaacagc gtgaacaaaa
      421 ccagccagac taggagcaga aagtgccagt atatggcaca gagttccacg ctcaggcgca
      481 cctgctccat cccgaagccg agccacgcct tggcagcggt ccttcccaag gccaccaagc
      541 cgccgaacaa gtgcagcccg tgcgcggcgg tgagcaggta gaagaagctg ttggccgggt
      601 tggtcgccac gtagtagccg gcggcggtca gctgtttcca cgccaggagc tgaccgacga
      661 ggaacgcgag ggcggacgcg ccgccggcga gcaggccggt cctgacactg tcgatctcgc
      721 cccggcgtgc ggcagtctgc gcccagtgca gcgccaagct gctgaggacc agcacgcccg
      781 tgttgagcca caggagcttc ggcgggggaa gaggcctcca gtccctcata cccaggcgta
      841 tggagtaggc gagaataaag agcgagaaca aggagccgac gacagcgaga aagatgccga
      901 gcccgatctt cggagtgagg gacgatgcgt ccgcgctgcg gacggcaccg atcggtccct
      961 cctccaacca gggcttggcc gtcaacctct gctgcgacag ccaccacacg gcaatcgccg
     1021 cgagcgcacc gaagaagagg attgcgacgc tcaaaggtgc agccttccta ggcggtccgc
     1081 gtgggtcccg gctggttctg gggtatgaaa tcctccgctg cgccgggcac gttgtaatcg
     1141 taggcccagc ggtagaccac cggcagctcc ttgccccagt tgccatgccc tggtggggtt
     1201 tcgggtgtct gccactccag tgtcgtggcc ctccagggat tgccgcctgc aggcttgccc
     1261 ttgaacaggc tcgagatcag gttgaacaag aacac
//
LOCUS       DASRPQ010001292         2225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3612776, whole genome shotgun sequence.
ACCESSION   DASRPQ010001292 DASRPQ010000000
VERSION     DASRPQ010001292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2225
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3612776"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..289)
                     /locus_tag="VFD73_14835"
     CDS             complement(<1..289)
                     /locus_tag="VFD73_14835"
                     /inference="COORDINATES: protein motif:HMM:NF012449.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0030955 - potassium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HZI75274.1"
                     /translation="MPRTQIRRTKIVATLGPSWDQPGQMTSLFDAGVNVVRINASHGT
                     PEIRARWIHQLRSVLDGRREAVAVLVDLQGPRIRIGNLPAPLKLESGQRVVF"
     gene            complement(312..1889)
                     /locus_tag="VFD73_14840"
     CDS             complement(312..1889)
                     /locus_tag="VFD73_14840"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZI75275.1"
                     /translation="MTPGSRPAGVASGFIRARQVFALAPGVQGDAIWWEDGKVRLVGS
                     AASVARSAPASTPSFDLPGAIITPGLVDGHTHLGLWAVNRRRVELTGCRSRAEAIARV
                     AAAVPVQGWVVGQGWDANGWSSPPDHHALDQVQQGPVYLDSLDVHSAWLNTAALHIAG
                     ITRDTVDPPGGRIVRDAAGEPTGVLLERAVELVTPFLPEPPPDVLEAALLEAQATAHR
                     VGITGIHNVENLATLDAFRRIEAAGRLRLRVLFHPPVAALAQLIGEHAQSGDGTAWLT
                     IGGIKLFLDGSLGSRTAWMLRPYTGSNDRGMPITTEAEARAAVHAAAHAGIAATVHAI
                     GDAAVRRALDLLEGLPPVTLPHRIEHFQCVDPADLDRAGRAGIILSMQPAHLFTDIPL
                     IERHWADCAAGAYAFKSLLQSGARLVFGSDVPVASLDPREGIYAAMERRAQDGTGPAW
                     GAGEKLSFGDCLTAYTLNPAVAAGVAGHRGRLAPGYDADLVAWSMDPGVERGDGAAVR
                     AGRAVLTVVGGEVVMQA"
BASE COUNT          429 a          715 c          690 g          391 t
ORIGIN      
        1 cgaacacgac tcgctgaccg gattcgagct tgagcggtgc gggcaaattt ccaatccgga
       61 tccggggccc ctgcaggtcc acgagcacgg cgacagcttc ccgtcggcca tcgaggacgg
      121 agcgaagttg atgaatccac cgggctctga tctcgggagt tccgtgggat gcattgatgc
      181 gcaccacgtt gactccagcg tcgaagagcg acgtcatctg tcccggctga tcccacgagg
      241 ggcccagggt ggcaacgatc ttggtgcggc gaatctgcgt tcgtggcatg caggagttta
      301 atgcacctct gctaggcctg catcacgact tctcctccca ctacggtcag cactgcgcga
      361 ccggcgcgca ccgccgcgcc gtctccgcgc tccactcctg gatccatgga ccaggccacc
      421 aggtctgcat cgtaccccgg cgcgagacgt cctcgatgcc cagccactcc agccgccact
      481 gcggggttca atgtgtacgc cgtgaggcag tcgccgaagg acagcttctc accggctccc
      541 catgccggtc ccgtcccgtc ctgggctctt cgctccatcg cggcatagat cccttctcta
      601 ggatcgagcg aggcaaccgg cacatcgctt ccgaatacga ggcgggcacc gctctgcagc
      661 aacgacttga atgcatatgc tccggctgca cagtcggccc aatgccgctc gatcagggga
      721 atgtctgtga agaggtgtgc cggctgcatc gagaggatga tgccagcgcg gcccgcgcgg
      781 tccagatccg ccggatcaac gcactggaaa tgctcgatgc gatggggaag cgtcactgga
      841 gggaggccct ccagcaaatc cagagctcga cggacggcgg catcgccaat ggcgtggacc
      901 gtggccgcaa tgccggcgtg tgccgcggca tggactgcgg cccgggcctc cgcctctgtc
      961 gtgatcggca tgcctcggtc attggagccg gtgtacggcc gaagcatcca ggcagtgcgg
     1021 ctacccaggc tcccgtccag gaacagcttg ataccgccga tggtgagcca ggcagtacca
     1081 tctccgctct gcgcatgttc tccgatcagt tgagcgagag cagcgacagg gggatgaaac
     1141 agtacccgca gccgaagtct ccccgccgcc tcgatgcgcc gaaaggcgtc cagagtggcc
     1201 aagttctcga cgttgtgaat cccggtgatt ccgacgcgat gcgccgtcgc ctgggcctcc
     1261 agtagcgctg cctcgagcac atcgggagga ggctcaggca gaaaaggcgt gacgagctcg
     1321 acggctcgct cgagaagcac tccggtgggc tcgcctgccg catcccgtac aatacggcca
     1381 ccaggcggat cgacggtgtc tcgggtaatt ccagcgatgt ggagtgctgc cgtgttcaac
     1441 caggcagagt ggacatcgag tgagtcgagg tatactggac cctgctgcac ctgatccagc
     1501 gcgtgatgat ccggcggaga tgaccagccg ttcgcatccc agccttggcc taccacccac
     1561 ccctggactg gcaccgctgc cgccactcgg gcgattgcct ctgctcgact gcggcagccg
     1621 gtcagctcga cccgccggcg attgaccgcc cataagccga gatgcgtgtg cccatcgacg
     1681 agcccgggcg taatgattgc gcccggcaag tcgaacgacg gggtagaggc gggggcggag
     1741 cgagcgaccg aagccgctga tccgaccagc cggactttcc cgtcttccca ccagatcgca
     1801 tcgccctgaa caccaggagc aagcgcaaag acttggcggg cccggataaa tccgctggct
     1861 acgcccgccg gacgggagcc tggggtcata gtcaaaccta gcccgtccca ctcgaaacat
     1921 gctggggcct gttacggggc ctcccggccg ctttccacat gtggaaaagc cggggaagtg
     1981 aatatcttat tgacgtgtaa aacctcacaa aaaccttgaa ctcgccgttc cccccacatt
     2041 gtcactagcg cagcaactca ttggttttag tgagcttgtg aaagacatct cgagcgggtt
     2101 cgccggacta tgacagtgtc gcctgtctcc aagtaattat gcagaaatcc taattatgaa
     2161 cactttcgac attgagggtc cggaggtgcg cagccgcgga gggtagagtc gggctaggga
     2221 cgagg
//
LOCUS       DASRPQ010001293         1445 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_151907, whole genome shotgun sequence.
ACCESSION   DASRPQ010001293 DASRPQ010000000
VERSION     DASRPQ010001293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151907"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(71..652)
                     /locus_tag="VFD73_14845"
     CDS             complement(71..652)
                     /locus_tag="VFD73_14845"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HZI75276.1"
                     /translation="MRILAAAKSALLDAGYANLATRGIAEAAGVPLSQIHYHFGSKQK
                     LVLAVLDMENQQRLARQAAMYQSNLPLWKQWQQACDFFDEDLDSGYVRVLMEMTAAGW
                     SNQEIADAVSAEIQGWFDLLVEVAQRAAERFGSLGPFTPQEVAALAGLPFLGAEAVIL
                     LGLDETKIAARPALRKIGELLRLAEEPPESEGQ"
     gene            complement(760..1185)
                     /locus_tag="VFD73_14850"
     CDS             complement(760..1185)
                     /locus_tag="VFD73_14850"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZI75277.1"
                     /translation="MESPNVETHRAGHEAFNQRDFVVMTKLYADSITWTDHAQGRTFR
                     TPQRFRDDFLAGWVEASADIRITNPRYIDAGQTSVCTFTVVGTHDGPLGPLPATGNEF
                     TLALCEMWHFDPSGRVVGGDLYYDQVSLLTQLGLMPQPS"
BASE COUNT          239 a          508 c          430 g          268 t
ORIGIN      
        1 gacgccgtcg cgaaccacga tcccctcgca atcggggtac cgggccctca tcgctgcccc
       61 cccggcttca ttactgcccc tctgactccg gcggttcctc ggccaaccgc agcaactcac
      121 cgatcttgcg cagcgccggg cgcgccgcga tcttcgtctc gtccaggccg agcaggatca
      181 ccgcctcagc tcccaggaac ggcaggcccg ccagcgcggc cacctcctgc ggagtgaacg
      241 ggcccagcga gccgaaccgc tcggccgctc gctgcgccac ctcgaccaaa aggtcaaacc
      301 agccctgtat ctcggcggat accgcgtcag cgatctcctg gttcgaccag cccgccgcgg
      361 tcatctccat cagcaccctg acatagcccg aatcaaggtc ttcgtcgaag aaatcacagg
      421 cctgctgcca ctgcttccac agcggcaagt tggactggta catggcagcc tgccgggcca
      481 gccgctgctg gttctccatg tccagcaccg cgagcaccaa tttctgcttc gatccgaagt
      541 ggtagtgaat ctggctcagc ggcacccccg cagcctccgc gatgcctcgc gtagccaggt
      601 ttgcgtagcc cgcatccagg agcgcgctct tggccgcagc cagaatccgc atccgggtgt
      661 cgcgctcctc taccaccgtg gatcccttct cgccgagcag gaccgactac ctgattgttc
      721 ggtcgttcga ccgaacgata tatgcgggcg ttctgtacgt caagacggct gcggcatcag
      781 gcccagctgc gtgagcagcg aaacctggtc gtagtacagg tccccgccga cgacccgccc
      841 gctcgggtcg aagtgccaca tctcgcagag cgccagcgtg aactcgttgc cggtggcggg
      901 gagcggtccg agtggcccgt catgcgtgcc gacgacggtg aaggtgcaca ccgatgtctg
      961 gccagcgtcg atgtaacggg ggttagtgat cctgatgtcg gccgaggcct ccacccatcc
     1021 cgccaggaag tcgtccctga accgctgggg cgtccggaat gtccggccct gcgcgtgatc
     1081 agtccaggtg atgctatcgg catacagctt ggtcatgacc acgaagtccc tctggttgaa
     1141 ggcctcgtgg ccagcgcggt gggtctcgac attcggggat tccatgactg ctccttcgcg
     1201 gctcttgcgg tcgatgacaa gaccatggtc acgtccgctg cttgcccgga ccgttcggtc
     1261 gcctttcccc gtcctttccg tatccttgct gtcacgacag ggataggact cttgacccga
     1321 ggtcgcctga tgggccagtg gacgaaggcc agaatccagc tgtgcggtcg cttcgtcgcc
     1381 gacatcgacg gctcccgcat cgaggacacg ctgcctggac gcatcgggcg ggtcatgttc
     1441 gccta
//
LOCUS       DASRPQ010001294         2039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_462884, whole genome shotgun sequence.
ACCESSION   DASRPQ010001294 DASRPQ010000000
VERSION     DASRPQ010001294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_462884"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..328
                     /locus_tag="VFD73_14855"
     CDS             <1..328
                     /locus_tag="VFD73_14855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75278.1"
                     /translation="LEAFGKKAQAALDEGKLQIELLRVRRRKDNTARDLGLLVHRRER
                     GGNLEPGRIDVLLARLDDLQADIARLELQVSEARRKSPAGATAVVDTHATSAAGSDPT
                     QPPTAG"
     gene            complement(332..1036)
                     /locus_tag="VFD73_14860"
     CDS             complement(332..1036)
                     /locus_tag="VFD73_14860"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HZI75279.1"
                     /translation="MRRPSVIAHRGASGYEYENSRAAFRRAVMLDADGVELDVHATLD
                     GGIVVHHDEEIPGVGPISQLSLAEARRSRIRNGETLPLLTEVLDLVGERDVWVEVKGL
                     PAAHDQRLLDVLDRGPAPDRYAVHSFDHRIVFRLGELRPSLRRGILLSAYLRDPIAVM
                     RSVGATTLWQEWQQVDEELVSRVHEADFTLIAWTVNDLGDLDRMVRLGVDGLCGNYPD
                     RIRVAIAPRLGEASRA"
     gene            1231..1740
                     /locus_tag="VFD73_14865"
     CDS             1231..1740
                     /locus_tag="VFD73_14865"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HZI75280.1"
                     /translation="MSFHRLLCVLLIITPLHVALAQRADSTPEQRPDSLHQRMGDRFA
                     ARVQHELGLTNDQAAKLRASSQTYGARRRELRSKEIALREALAAQLRPGVAANQDSVT
                     KLTDALLDLRVSSAQTSRDEMKDMAKYLNPVQRARVLLIRERMLRRFEEGHSRDAMRG
                     HRMRDHSSM"
     gene            1788..1870
                     /locus_tag="VFD73_14870"
     tRNA            1788..1870
                     /locus_tag="VFD73_14870"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1821..1823,aa:Leu,seq:caa)
BASE COUNT          375 a          670 c          621 g          373 t
ORIGIN      
        1 gctcgaggcg ttcggcaaga aggcacaggc cgcgctggat gagggaaagc tccagatcga
       61 gctcctccgg gttcggcgcc ggaaggacaa taccgcccgt gatcttgggc tgcttgttca
      121 ccggcgggag cgcgggggaa acctcgagcc tggccgcatc gacgtgctgc tcgctcggtt
      181 ggacgatctc caggccgaca tcgcccggct ggagctgcag gtttctgagg cccgccgaaa
      241 gagccccgcc ggtgctaccg ctgtggtgga cacccacgca acgagcgctg ctggttctga
      301 tcccacccag ccacccaccg ccgggtagcg ctcaggcccg ggaggcctcg cccagtctcg
      361 gagcgatcgc aacgcgaatt cgatcggggt agttgccgca gaggccgtcg acgcccagcc
      421 gcaccatgcg atccaaatcg cccagatcgt tcacggtcca ggctattagg gtaaagtcgg
      481 cttcgtgcac ccggctgacc aactcctcat ccacctgctg ccactcctgc cagagggtgg
      541 ttgcgccgac cgagcgcatc accgcaatgg gatccctgag atacgcgctc aggagaatgc
      601 cccggcggag gctcggacgg agctcaccga ggcgaaagac gattcggtga tcgaagctgt
      661 ggaccgcgta tcggtccggc gccggcccgc ggtccagcac gtcgagcagc cgttggtcgt
      721 gggcggctgg gagacccttg acctcaaccc agacatcgcg ctcaccgacc aagtccagca
      781 cttccgtgag cagcggcagc gtttcaccgt tgcggatacg ggatcgccgt gcttccgcca
      841 gactgagctg agagatcggg ccgactccgg ggatctcttc atcgtggtgc accacgatgc
      901 cgccatccag ggtggcatgc acatccagct ccacgccatc ggcgtcgagc atcacggccc
      961 gccgaaaggc ggctctggag ttctcgtatt cgtaaccgga cgcgccccgg tgggcgatca
     1021 cgcttgggcg tcgcatggcc taagatagcc gctcccatag agaccagcca ctgagcagcc
     1081 gcgcatgctg acgtcgatgt tgcagcaacc agatgtgccg ctggggcatt cattcataag
     1141 taccaaacaa cctcgcagcc cgactgttga gagttacgat ctgtccggag ttgcggcact
     1201 cagccgcaca cttttcttgt gaggagactc atgagtttcc atcgcctatt gtgcgtgtta
     1261 ctgattatca ctccactcca tgtcgccctg gcccaacgcg cggactcaac cccagaacag
     1321 cggcccgatt ccttgcacca gcgcatgggt gatcggttcg ccgcgcgagt gcagcacgag
     1381 ttggggctga ccaacgatca ggcggccaag ctccgcgcca gcagccagac gtacggtgcc
     1441 cgccgacgcg agcttcgaag caaggagatt gcactccggg aggctctcgc tgcccagctt
     1501 cgtcctggag ttgccgccaa ccaggacagt gtcaccaagc ttaccgatgc gctcctggat
     1561 cttcgggtca gctcggccca gacctcccgg gatgagatga aggacatggc caagtacctc
     1621 aatccggtgc agcgtgcccg cgttctcctg atccgagagc ggatgcttcg acgcttcgag
     1681 gaaggtcact cccgggatgc catgcgtggt caccggatgc gggatcactc gtccatgtaa
     1741 gggtagtctc cgcgcccggg ctggtaactc gttattttgg ttggtcggcc cgagtggcgg
     1801 aatggcagac gcagcggact caaaatccgc cgagggcaac ctcgtgcgag ttcgactctc
     1861 gcctcgggca ctggtattcc gtaaggactt agcgctcgac tgaccaggtc tccgaacggc
     1921 ttccacagct gatcgtaccc gtgttgtgcc ttcgctcttc aacaagtccc ggatgatctc
     1981 tgcggacgtc gcttcaacat cccacttaga ccatcgttgg ccagccccgg ctcgatctt
//
LOCUS       DASRPQ010001295         1632 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2684681, whole genome shotgun sequence.
ACCESSION   DASRPQ010001295 DASRPQ010000000
VERSION     DASRPQ010001295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1632
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2684681"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            150..1291
                     /locus_tag="VFD73_14875"
     CDS             join(150..411,411..1291)
                     /locus_tag="VFD73_14875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612068.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZI75281.1"
                     /translation="MTSKRKRYSADFKAKVALEALRGELTTAQLATKHGIHPTMVGEW
                     KRQAMEGLTAVFADRSVAQEAAKSSEAEIEKLHAKIGQLVVERGFFGQSLRSMLIERR
                     RQMIEPDHPELSIVRQCELVSISRSRFYYQPVGDTPLNLELMGLIDRQFLETPWYGSR
                     QMARHLRREGYAVGRKRVRRLMAEMGLEPIYQRPRTTVPHPEHRVYPYLLRELVIERP
                     NQVWCADITYIPMQRGFLYLVAVMDWTTRKVLSWRVSNTMDADFCIEALEEALERFGR
                     PEIFNTDQGSQFTSPRFTGVLREAGVRISMDGGGRWMDNVFIERLWRSLKYECIYIHA
                     FETGSSLRAGLRDWIGYYNTRRPHSTLAGRTPDEAYWATGTEKLAA"
BASE COUNT          332 a          439 c          547 g          314 t
ORIGIN      
        1 tcctagaggc tgttatgaac ctgctgccag taaagcgagc tttttgagca tcaggcagac
       61 gaaagcgatg aggtgaaatc ctttgaggtg gtccccggaa tttggacagc ggtctaagct
      121 cggttcgctc ctgagaagga cggacctgga tgacgagcaa acggaagcgg tattcggcgg
      181 atttcaaggc gaaggttgcg cttgaggccc tgcgcggtga gctgacgacg gcgcaattgg
      241 ccaccaagca tggcatccat ccgacgatgg tgggtgagtg gaagcggcag gccatggaag
      301 gcttgacggc ggtgtttgcg gatcgctcgg tggcccagga agcggcgaag tcgtctgagg
      361 ctgagattga gaagctgcac gcgaagatcg gccagttggt ggtggaacgg gattttttgg
      421 ccaaagcctc cgatcgatgc tcatcgagcg gaggcggcag atgattgagc ctgatcaccc
      481 cgagctctcg atcgtgcggc agtgcgagtt ggtctcgatc agccggtcta ggttctacta
      541 ccagcctgtt ggggataccc cgctgaacct ggaactgatg gggctgatcg accggcagtt
      601 cctggagacg ccgtggtatg ggtctcgcca gatggcccgc cacttgcggc gcgaaggcta
      661 tgcggttggc cgcaagcggg tgcggcggct gatggccgag atggggctgg agccgatcta
      721 ccagcggcca cggacgacgg ttccgcatcc cgagcaccgg gtttatccat atctgctgcg
      781 ggagctggtg atcgagcgtc cgaaccaagt ctggtgtgcg gacataacgt atatcccgat
      841 gcagcgcggc tttctctatc tggttgcggt gatggactgg accacgcgca aggtgctgtc
      901 gtggcgggtc tcgaacacga tggacgctga cttctgcatt gaagcgctgg aggaggctct
      961 ggagcggttt ggccgaccgg agatcttcaa caccgaccaa ggcagccagt tcacctcgcc
     1021 acggtttact ggtgttttgc gcgaggcggg tgtgcgcatt tcgatggacg gaggagggcg
     1081 atggatggat aatgtcttca tcgagcggct gtggcgcagc ctgaaatacg aatgtatata
     1141 cattcatgcg ttcgagaccg gttcgtcatt gcgggctgga ctgagggact ggatcggcta
     1201 ctacaacact cggcggccgc attcgacgtt ggccgggcgg acacccgatg aggcatactg
     1261 ggccacagga acggagaaat tggcggcctg acaacaacct gaaccgagct taacccagcc
     1321 gccaaactgt ccaacaagac gggtccatct cagggtggag tcgcgccact gatcaccaac
     1381 ctcatcagcg caaagcttgg atgcaaatgc cattgggcca ttcccgacta cctgcagcga
     1441 tcggcccgcc acattgcctc cggaacagat gtcgagcagg cctatgcagt cggccgcgcg
     1501 gcggtggaat tcgcaatcgc cggaaggagt ggcataatgc cggcgatccg acggctcagc
     1561 gatgcgccct atcgctggga catcatcgag gccccgctcg ccgaggtcgc caaccgggaa
     1621 aaactgctgc cg
//
LOCUS       DASRPQ010001296         1214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1413776, whole genome shotgun sequence.
ACCESSION   DASRPQ010001296 DASRPQ010000000
VERSION     DASRPQ010001296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1413776"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1202)
                     /locus_tag="VFD73_14880"
     CDS             complement(<1..1202)
                     /locus_tag="VFD73_14880"
                     /inference="COORDINATES: protein motif:HMM:NF012873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="condensation domain-containing protein"
                     /protein_id="HZI75282.1"
                     /translation="MAEEMEKQGQYWERVLRGAPAMLELPMDRPRPAQQEYAGGGIRI
                     ELDADLTGQLKELSRRAGTTLFMTVLGGWMAVLGHLARQEDVVVGTPVANRGHEQIEG
                     LIGFFVNALALRVEVRGELRVRELLEGVKGRVLEAQQNQDLPFEQVVERVRPERSLAH
                     SPIFQTVFAWQSNEGRTLSLPGVEVGASEAVTHDVSKFDLTLSMRERGEGITAPLEYA
                     TSLFDEATVRRMMGYLRTMLAGMVEDEGREIGSIGLLTGEEREQVLEEWNDTSREMAD
                     STLPELFEQQAERTPDAVAVVHGEQSVSYRELNERANRLAHYLRRLGVRLDARVAICV
                     ERGVEMVVGLLAVLKAGGAYVPLDPEYPAERLRLMLEDSASTVLLTERSLWGVFSDLT
                     NDLSNQNL"
BASE COUNT          216 a          524 c          233 g          241 t
ORIGIN      
        1 ctgagatttt gattactgag atcatttgta agatcgctga agactcccca gagtgaacgc
       61 tccgtcagca gcactgtcga tgcgctgtcc tccagcatga gccgcaaccg ctccgccgga
      121 tactccggat ccagcggcac atacgctccc cctgccttca acacggccag taagccgact
      181 accatctcca ctccccgctc cacgcagatc gccacacgtg catccagccg cactcccaac
      241 cgccgcagat agtgcgccag acggttggct ctctcattca gctcccggta actgacgctc
      301 tgctctccat gcaccaccgc caccgcatcc ggcgtccgct ccgcctgctg ctcgaataat
      361 tccggtagcg tcgaatccgc catctcccgg ctcgtgtcgt tccactcctc cagcacctgc
      421 tcccgctctt cccccgtcaa caacccaatc gaaccaatct cccgcccttc gtcctctacc
      481 atccccgcca gcatcgtccg caaatacccc atcatccgcc gcaccgtcgc ctcgtcaaac
      541 aacgacgtcg catactccaa cggcgccgtt atcccctcgc ccctttcccg catagacaag
      601 gtcagatcaa acttcgacac atcgtgagtg accgcctccg aggctcccac ctcaacccca
      661 ggcagactga gcgtacgccc ctcgttgctc tgccacgcaa acactgtctg gaatatcgga
      721 ctgtgcgcca acgaccgttc cggcctcacc cgctccacca cctgctcaaa cggtaggtcc
      781 tggttctgct gcgcctccag tactctcccc ttcaccccct ccagcagttc ccgcaccctc
      841 agctctcccc tcacctcgac ccgcagcgcc agtgcattca caaagaatcc aatcaatccc
      901 tcgatctgct cgtgcccccg gttcgccacc ggcgtcccta cgactacatc ctcctgcctc
      961 gccagatgcc ccaacaccgc catccatcct cccagcaccg tcatgaacag cgtcgttccc
     1021 gctcgtcggc tcaattcctt cagttgcccc gttaggtccg catccagctc gatccgtatc
     1081 ccccctcccg catactcctg ttgcgctggc cgcggccggt ccatcggcag ctccagcatc
     1141 gccggcgctc ccctcaacac cctctcccag tactgcccct gcttctccat ctcctccgcc
     1201 accgcctcgc tcct
//
LOCUS       DASRPQ010001297         1700 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4221000, whole genome shotgun sequence.
ACCESSION   DASRPQ010001297 DASRPQ010000000
VERSION     DASRPQ010001297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4221000"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..437)
                     /locus_tag="VFD73_14885"
     CDS             complement(<1..437)
                     /locus_tag="VFD73_14885"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070497 -
                     6-carboxy-5,6,7,8-tetrahydropterin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HZI75283.1"
                     /translation="MQSTFRVHVSKDYLVFASAHFITFKGHQCETLHGHNYRVGVAVE
                     GSLDAETRFVLDFSVLKQLTRQLVDRIDHKVLLPTQNPKLAFREDGDRLSVDYFGTPT
                     YVFPKRDCALLPISNSTAEMLAQYLGTQLREELAAGGYTHLTSL"
     gene            complement(448..1296)
                     /locus_tag="VFD73_14890"
     CDS             complement(448..1296)
                     /locus_tag="VFD73_14890"
                     /inference="COORDINATES: protein motif:HMM:NF013991.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triphosphoribosyl-dephospho-CoA synthase"
                     /protein_id="HZI75284.1"
                     /translation="MISADRVAAAGQLACLLEVSAPKPGNVSPERHFHDTRYEDFLAS
                     AVAIGPALAAAGKQPLGVTIRRAVEDTLRWTRSNTNLGIVLLLAPLAKAAQMSGTPLR
                     NQLATVLAGTTVEDAAEVYAAIRQARPGGLGSSTAEDVTRAPTVTLREAMALAAERDA
                     IAREYVSDFKLTFEVGVPALLAARREGLSWTDAVVDTYLGLLEAVPDTHIARKLGAAE
                     AKAISLRARAARAQGGTRSAAGRRALGELDRELRDPRNRRNPGTTADLTCAALFVVIL
                     EGGWDR"
     gene            complement(1293..>1700)
                     /locus_tag="VFD73_14895"
     CDS             complement(1293..>1700)
                     /locus_tag="VFD73_14895"
                     /inference="COORDINATES: protein motif:HMM:NF020032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75285.1"
                     /translation="GDPDLAFRVFRTIEQIRGVFYLQRAIEHSGADLRLFVLGGRVVG
                     TIERRASGWRTNLARGATAASVRPDEVDASLAVRAAAAVGAEYAGVDLLKGADGITYV
                     LEVNGIPGWKGLQHTTGVDIAGLLVDYLATRNA"
BASE COUNT          302 a          541 c          558 g          299 t
ORIGIN      
        1 aggctggtca ggtgggtgta gcctcccgcc gccagctcct cccggagctg agtcccaagg
       61 tattgggcca gcatttcggc ggtgctgttc gagatgggca acagcgcgca atcccgcttg
      121 ggaaagacgt aggtaggagt accgaagtaa tccactgaga gtcggtcacc atcttcccga
      181 aacgccagct tcgggttctg ggttggaagc agcaccttgt ggtcgatccg atcgaccagc
      241 tggcgggtta gctgcttcag cacgctgaag tcgagcacga accgggtctc tgcatccaga
      301 cttccctcca ccgccacgcc aacgcggtag ttgtgtccgt gcagcgtctc gcactgatga
      361 cccttgaagg tgatgaagtg ggccgaggcg aaaaccagat agtctttgct gacgtgaacg
      421 cggaaggtgc tctgcacgat ggttctccta acgatcccag cccccctcaa gtataacgac
      481 gaacaatgcg gcacaggtga gatcggcggt ggtgccggga ttgcgacggt tacggggatc
      541 tcggagctcg cggtcgagct cacctaatgc ccggcgccca gccgccgatc tggtgccgcc
      601 ctgcgcgcgc gctgcacggg ctcggagaga gatggctttg gcttcggctg ctccgagctt
      661 tcgggcgata tgggtgtccg gaacagcctc cagtagtccc agataggtat ccacgacggc
      721 atcggtccat gacagcccct ctcggcgtgc cgcaaggagc gcggggactc ccacttcgaa
      781 ggtcagcttg aagtcggaga cgtattcccg cgcgatcgca tcgcgttcgg cggcgagcgc
      841 catggcttct cgcagcgtca cggtgggcgc tcgggtaacg tcctccgccg tggatgagcc
      901 cagcccaccg gggcgcgctt gccggatggc ggcgtacacc tcggcggcat cctcgaccgt
      961 ggtgcccgcc aggacggttg cgagctggtt tcgcagtggt gtccccgaca tctgagcggc
     1021 tttggccagg ggagccagca ggaggacaat tccgaggttg gtattggacc gggtccatcg
     1081 cagggtgtct tcaaccgcgc gacgaatggt aacgccaaga ggctgcttcc ctgccgcagc
     1141 gagcgccgga ccgatcgcga ccgcgctcgc gaggaagtcc tcatatcgtg tgtcatggaa
     1201 atgccgctcg ggggagacat tccccggttt tggtgcgctc acttccaaca ggcatgccag
     1261 ctggccagcc gcggcaaccc tgtcggccga gatcacgcgt tacgggttgc gaggtagtcc
     1321 acgaggagcc ctgcgatatc gacaccggtg gtgtgttgaa gccccttcca gccgggaata
     1381 ccgttgacct cgagcacgta ggttatccca tccgctccct tgaggaggtc gaccccggca
     1441 tactcagccc caacagcggc ggccgcgcgc accgcaagcg acgcgtccac ctcgtcgggt
     1501 cggacggagg cagcggtagc gcctcgagcc aggttggtcc gccagccgct cgcgcgccgc
     1561 tcgatggtac cgacaacccg gccccccagg acgaagagcc gcagatcggc cccgctgtgc
     1621 tcgatggcgc gctgcaggta gaagacaccg cgaatctgct cgatggtgcg aaacacgcga
     1681 aacgccaggt ccgggtcgcc
//
LOCUS       DASRPQ010001298         1300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3613513, whole genome shotgun sequence.
ACCESSION   DASRPQ010001298 DASRPQ010000000
VERSION     DASRPQ010001298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3613513"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..667
                     /locus_tag="VFD73_14900"
     CDS             <1..667
                     /locus_tag="VFD73_14900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75286.1"
                     /translation="LAARTGISPRQRVNQICHELEHAGLVRRRFGPAGKIVNEWLGSR
                     DGQPDGAPGPSGSGVSRTAALTGGAAVQAGYELPPGSSREQRDAERVMLDLLGRQLGR
                     DLSPARLAVPSGERVEVDGTDADRSVLVECWAHQGPPKSAQRHKVLADAFKLTWIAAT
                     MDPRPQLILCLSDPLAAATFMPGGRSWAARAFQDLGVTVSVVELPADLRHDLLRAQRR
                     QYR"
     gene            complement(975..>1300)
                     /locus_tag="VFD73_14905"
     CDS             complement(975..>1300)
                     /locus_tag="VFD73_14905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75287.1"
                     /translation="SPAPGRPIPLHLPIAELTAVTESVIARNPNELARQDTRQMFAAL
                     VLRGIRATLVSGVRLNPRALTAIRMIAQFFGEEAPVSPGPVTSPPRRGVEPIASARTP
                     ATSPE"
BASE COUNT          211 a          401 c          447 g          241 t
ORIGIN      
        1 gcttgcagcc cggaccggta tctcgccccg gcagagggtc aaccagatct gtcatgagct
       61 ggagcatgcc gggctggtac gacggcgatt cggcccggcg gggaagattg tcaacgagtg
      121 gctcgggagc cgtgacggtc agccggatgg tgctccggga ccctccggtt ccggtgtttc
      181 ccggacggct gcgctgaccg gaggtgctgc ggtccaggct ggctacgagc tgccgccggg
      241 cagctcgcgg gaacagcgtg acgccgagcg ggtgatgctg gacctgctcg gccggcagct
      301 gggccgggat ctgagcccgg ccaggctcgc tgtgccatca ggcgagcgcg tcgaagtgga
      361 tggcaccgat gcagaccggt ccgtcctggt cgagtgctgg gcccatcagg ggccgccgaa
      421 gtcagcccag cgccataagg tactggccga tgccttcaag ctgacctgga tcgccgccac
      481 catggacccc cggccgcagc tgatcttgtg cctgagcgat cctctcgccg cagcgacctt
      541 catgcccggt ggccggtcat gggcagcgcg ggcgttccag gatctcggag tcaccgtctc
      601 cgtggtagag ctgccagccg acctccgcca cgacctgctg cgagctcagc gccgccagta
      661 ccggtaacta cggtcaggtc atatccgacc tcgagcggcg ccggaatcga tatggtcggt
      721 aacctggccg atccagcacc tgccaggtga tgtaccgaac tggactatct gagcgaagac
      781 actcgtataa cagttggctc accgacgtcc ggatctgcga ggacagcgcg tgagctctgc
      841 tcattattat caagcggctc ttcgcagagt tcttcacgtc catctgggcg taatgctctg
      901 gtagtttttc attccgcccg ctactcactg gtaagccggt tcactggcat ataaataagt
      961 gctggttact tcggctattc cggagacgtg gccggtgtcc gcgccgacgc tatgggttcg
     1021 acgccgcggc gcggggggct ggtgacaggc ccgggcgaaa ccggtgcttc ctccccgaaa
     1081 aactgggcga tcatccggat ggcggtcagt gctctggggt tgagtcgtac gcctgagacc
     1141 agggtggccc ggatgcctct caggacaagc gccgcgaaca tctgacgggt gtcctggcgc
     1201 gctagctcgt tcggattacg cgcgatgacg gactcggtga ccgcggttag ctcggcgatg
     1261 ggcaggtgca gcgggatcgg tcggcctggt gccggggaag
//
LOCUS       DASRPQ010001299         1240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4548389, whole genome shotgun sequence.
ACCESSION   DASRPQ010001299 DASRPQ010000000
VERSION     DASRPQ010001299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4548389"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..772)
                     /locus_tag="VFD73_14910"
     CDS             complement(<1..772)
                     /locus_tag="VFD73_14910"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase/maturase family protein"
                     /protein_id="HZI75288.1"
                     /translation="MQDAEVVLDVLRERGRKGLPLTQLYRQMFNPGMYLLAYGRIYSN
                     QGAMTPGACGETADGMSEGMIREIIELMRFERYRFAPARRVYIPKKNGRLRPLGITSW
                     RDKLVGEVVRLILEAIYEPSFSSRSHGFRKGRGCHTALREIRDGWTGTVWFIEGDISD
                     CYGSVDHEILMRILSEKIGDQRFLRLIRGMLRAGYMEDWEYRDTLSGVPQGGQVSPVL
                     SNIYLHKLDEFVERELIPQYTRGEHRARNLEYKRVQRLL"
     gene            complement(1064..1195)
                     /locus_tag="VFD73_14915"
     CDS             complement(1064..1195)
                     /locus_tag="VFD73_14915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75289.1"
                     /translation="MQTGDRAQAYGTVRREIRAIWRKLDCLKPSLQKARNNARRKDA"
BASE COUNT          202 a          442 c          356 g          240 t
ORIGIN      
        1 ccagcaggcg ctggaccctt ttatactcca ggttccgcgc ccggtgctct ccccgcgtgt
       61 actgcgggat cagttccctc tcgacgaact catcgagctt gtgcaggtag atgttactga
      121 ggacgggcga gacctgaccg ccttgcggaa ccccgctgag cgtgtcccgg tattcccagt
      181 cctccatgta cccggcccgc agcatgccgc ggatgagccg gagaaaccgc tggtcaccga
      241 tcttctccga gagaatccgc atcaggatct cgtgatcaac ggacccatag cagtcggaga
      301 tatcgccctc gatgaaccac acagtcccgg tccagccgtc gcggatctcc cgcaaagcgg
      361 tatgacaccc tcgtcctttc cggaacccgt gcgacctgga cgaaaacgac ggctcgtaga
      421 tcgcctccaa gatcaggcgg accacctcgc cgacgagctt gtcccgccac gacgtaatgc
      481 ccaaggggcg gagcctgccg ttcttcttcg ggatatacac ccggcgggcc ggggcgaacc
      541 ggtaccgctc gaaccgcatc agctcgatga tctcgcggat catcccctca gacatgccgt
      601 ccgcggtctc cccgcaggcc cccggcgtca tcgccccctg gttggagtag atgcgcccgt
      661 aggccagcag gtacatgccg ggattgaaca tctgccggta cagctgcgtg agcggcaggc
      721 ccttcctgcc gcgctcgcgg aggacatcca gcaccacttc ggcatcctgc attacgcatc
      781 cctcgcagcc tgtgctgtcc atcgcctgtg ccccttcgcc ctgtggtccg ccgttagcgg
      841 tctccagatt ggccggacgt gaccccggcg actacatatg ggcactccgt cgccatagga
      901 ctcgcgtccc gtaggcgatc ccacggtcac tactgctgta cgtgtcgagc gcgacttagg
      961 cgtcccgttc gtctccttca atgcccggac agggcatcgc tcctgcgccc cggaggattg
     1021 ccgcaggtcc tcgagcaccc tgcggcaggg gccggcgccg gtttcaggcg tctttccggc
     1081 gggcgttgtt tcgcgccttc tggagactgg gcttcaggca atccagcttt cgccatatcg
     1141 cgcggatctc ccggcgcacc gtcccgtacg cctgggcacg gtcgccggtt tgcatggcat
     1201 gctacggtcc ccttcacctt tcagatccag gtaaagccat
//
LOCUS       DASRPQ010001300         7648 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2684886, whole genome shotgun sequence.
ACCESSION   DASRPQ010001300 DASRPQ010000000
VERSION     DASRPQ010001300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7648
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2684886"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1298)
                     /gene="dnaX"
                     /locus_tag="VFD73_14920"
     CDS             complement(<1..1298)
                     /gene="dnaX"
                     /locus_tag="VFD73_14920"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF004046.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HZI75290.1"
                     /translation="MTISLARRYRPKRFSDLLVQDHVAAVLRGAISRGRVAHGYLLTG
                     PRGVGKTTAARILAMALNCGQRDASGEPCGECENCLRIWNGSANLDVVEIDAASNRGV
                     DDARDLRERAMYAASREGHYKVYIVDEAHMLTREAWNALLKILEEPPPGVVFVFATTE
                     PQKIATSAAPVMSRLQRFDFRRIGSQAIRDRLRQVLSAENLSADEDALTLIARHADGG
                     MRDALSILDQCLSFGEGAVTAQRVREVLGLADDELYEEMLRLIVEHDPGAVFSLTDRL
                     SDAGVDLTEFTAGAADVLRAVLMLQVGAEPEGITEAVRATLERYRSRLEPGDVLRMLQ
                     MLHDNEVNIRRNVNARLTVETLLLRWAMLDRMVDLEEVINAGQGRGGGAGQASARQRE
                     SGEAAGQRSGQGASSEAPPSTPGASAPLPRGPAAPPATAKL"
     gene            complement(1329..1428)
                     /gene="ffs"
                     /locus_tag="VFD73_14925"
     ncRNA           complement(1329..1428)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VFD73_14925"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            complement(1460..2398)
                     /locus_tag="VFD73_14930"
     CDS             complement(1460..2398)
                     /locus_tag="VFD73_14930"
                     /inference="COORDINATES: protein motif:HMM:TIGR00765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HZI75291.1"
                     /translation="MNNYRPGGWHLSPAGFLRRTLQAADEDNIPFLASALTFDALLAA
                     VPFILLLLIGLTHLAQAVTHQPEPDTIHLFHRFLPPHSASLPDRDPLGVIEQLLTKIS
                     RKRGQLSLYAAPAFLWFSTRLFAGIRTSLNDIYDVSLRPPRRRAFVITFLLAKLRDAL
                     MVIGTLILFLANTLLTTGLAILQARGAASVPQLGFFVSTVGRLLGQLLAFSFSVSLFY
                     VTYSYASVRRLPWKTALLAATFTALLFEVAKRLYALYLSNFASLEGLGGDANLGAIVL
                     FILWVYYTAIVFLLGAVVAETWELKKMLQSQRAILG"
     gene            complement(2395..2799)
                     /locus_tag="VFD73_14935"
     CDS             complement(2395..2799)
                     /locus_tag="VFD73_14935"
                     /inference="COORDINATES: protein motif:HMM:NF024143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HZI75292.1"
                     /translation="MRRKQQREVVFVERAGDSSAKWLFWGALLGAGVALLYAPSSGEE
                     TRRNLQRKLWKLRAMTEEKLDEITQQFGGARESLHEMLEDEEDDDLEEGSDTQGRYSR
                     SSPPSPREELERRLAEARARRRSPADLEEPLA"
     gene            complement(2808..4223)
                     /locus_tag="VFD73_14940"
     CDS             complement(2808..4223)
                     /locus_tag="VFD73_14940"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HZI75293.1"
                     /translation="MADATQRAVDRYDGAVVVVPGGIKLRDQNKLRSAATDRLAWQAV
                     FAEPNDREAARWLLWELGQVTGARPASINDLYLARGRGECGGFTVPAINVRMLTYDTA
                     RAIFRAARAGKAGAIILEIARSEIAYTEQRPAEYVAVLIAAALREGYTLPLFIQGDHC
                     QVNHKKYQSDPEGEVGEVKKLIAEEVGAGFYNIDVDTSTLVDLSKPTLKEQQRLNYER
                     AAEITAFIRGLEPSEVTVSVGAEIGEVGMKNSTVEELHAFMQGYNESLAGLGDYIGIS
                     KISVQTGTSHGGVVLPDGSIADVKLDLQALAALSQVAREQYGLAGAVQHGASTLPSNA
                     FGNFPRIETAEIHLATNFQNIVFDHPRLPSDLRDRMRSWLDENAAGERKSGDTQEQFY
                     YKARKKAIGPFKRDVWSLPEDIRSAIAADLEKTFSFLFEQLNVNGTEEQVNRFIHAPI
                     QHHAALKPVLVAAADDPDAGE"
     gene            complement(4310..5698)
                     /locus_tag="VFD73_14945"
     CDS             complement(4310..5698)
                     /locus_tag="VFD73_14945"
                     /inference="COORDINATES: protein motif:HMM:NF012562.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HZI75294.1"
                     /translation="MITFSYGRMLREQLDGTHGVERARLDALRARFGDIQKEVRKRRG
                     AGEYGFYNLVSQGPTVRAIRTFAEGLGQAHDHVLVLGIGGSALGTKALLNALRPPAWN
                     ELDDEGRDFFPRLTVLENIDPVSVAAALGRIDPRRVLVNVISKSGGTAETMAQYLVVR
                     AWLEQALGPAAYRHLVFTTDPARGALRELAQRERIATLDVPPDVGGRFSVLSPVGLLP
                     AALVGIDIEGLLEGAGHALNRSEADDLLQNPAALYAALHWEADVALGANVHVVMPYAD
                     QLRNFAEWYRQLWAESLGKRVDRAGRTVNVGPTPVAAVGATDQHSQVQLFMEGPFDKV
                     ITFVTVEDFGQDVEIPRPSASALPSDLEYLPGHTLGELLQAEYRATSAALGQMGRMNC
                     TLRLPDLSAATVGEALMFLQVATGYAGVWYGIDPFDQPGVELGKRLTFAAMGRPGYDT
                     PAPSAPSSVDEV"
     gene            complement(5695..6465)
                     /locus_tag="VFD73_14950"
     CDS             complement(5695..6465)
                     /locus_tag="VFD73_14950"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HZI75295.1"
                     /translation="MRLTFLGTGTSFGVPQIGCGCAVCRSSDPRDKRTRSGAVVESGG
                     STILIDTPPELRLQLLSAGFTRIDAVVYTHEHADHINGIDDLRIFSQRQPLPIYGPAE
                     TLARLRGSFNYIFDDAVRPYEGTSKPRLALHEIEPNQMLTVANVPVLPLAFQHGHLRV
                     FGYRFGNLAYITDVKTISPPERERLRGLDVLVLNALWWRPHPTHMSIPEAVETAQSLG
                     AARTYLTHLTHETGHADLETKLPAGILPAYDGLTVEVA"
     gene            complement(6469..>7648)
                     /gene="pyk"
                     /locus_tag="VFD73_14955"
     CDS             complement(6469..>7648)
                     /gene="pyk"
                     /locus_tag="VFD73_14955"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: protein motif:HMM:TIGR01064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HZI75296.1"
                     /translation="FAPEENAHDGEIPTTYDDLARDVRVGATILLDDGLLALEVRGVH
                     EERVEAVVHYGGELKAYKGMNLPGIEVSAPALTEKDVEDVGQVAALGVDYIALSFVRR
                     PEDLEQLRTLVPRGIKLVAKIEKDTAIKNLCAILDASDAIMVARGDLGVELPFEEVPL
                     IQKQIIREAGLHGKPVITATQMLESMVHAPRPTRAETSDVANAILDGTDAVMLSAETA
                     VGDYPLEAVQAMDRIAREMESQRQTRGVTIDAALGRRGTEGGALKGHRSSPSGPIRTE
                     DAIAVAVCAAAEMLSAPLIVCFTSSGFTARKVATCRPTVPVFACTPEPETFRQLSLVW
                     GVTPALTDHSANYDSMLAVARQQILDRQLAQPGERVVVTAGVPFDMPGTTNLLKVEAV
                     "
BASE COUNT         1429 a         2455 c         2415 g         1349 t
ORIGIN      
        1 agctttgccg tagcaggcgg ggccgcgggg ccgcgaggca gcggcgcact cgcacccggg
       61 gtactcggcg gtgcttccga ggaggctccc tgaccgcttc tctgccctgc cgcctctccg
      121 ctttcccgct gtctcgccga ggcctgcccc gctcccccgc cgcgaccctg ccctgcgttg
      181 atcacttcct ccagatcgac catccggtcc agcattgccc aacggagcag cagcgtctcc
      241 acggtcaacc gggcgttcac atttcgccga atgttgacct cgttgtcgtg aagcatctgc
      301 agcatcctca ggacgtcacc cggctccagc cggctgcggt agcgctccag cgtggcacgg
      361 acagcctcgg tgattccctc cggttccgct ccgacttgca gcatcaacac cgcccggagc
      421 acatccgcgg caccagcggt gaactccgtg aggtcaactc cggcatcgct cagccgatcg
      481 gtcagggaga acaccgcgcc ggggtcgtgt tccacaatca gccggagcat ctcctcgtag
      541 agctcgtcat cagcgaggcc gagcacctcg cgcactcgtt gggccgtcac cgctccctcg
      601 ccgaagctga ggcactgatc gaggatcgag agcgcgtccc gcatgccacc gtcggcgtgc
      661 cgggcgatca acgtcagggc gtcctcatct gcgctgaggt tctcggctga gagcacctgc
      721 cgcagccggt cacgaatcgc ctgcgagccg atccggcgaa aatcgaaacg ctgcagccgg
      781 gacattaccg gggcagctga ggtcgcgatc ttctgaggtt cggtggtggc aaagacgaac
      841 accaccccag gcggtggctc ctccaggatc ttgagcaggg cgttccaggc ctcccgggtg
      901 agcatgtggg cttcatcgac gatgtagacc ttgtagtgtc cctcgcggga agcggcatac
      961 atcgcccgct cgcgcaagtc gcgggcgtcg tcgacccccc ggttgctggc agcatcgatc
     1021 tccaccacat ccaggttagc ggagccattc cagatgcgca ggcagttctc gcattctccg
     1081 cagggctcgc cgctggcatc gcgctgacca cagttgagag ccatggcgag aatacgggca
     1141 gccgtggtct tgccgacgcc gcgcgggccg gtcaggaggt acccatgggc aacccgcccg
     1201 cgggaaatag ctccgcgcaa cactgcggcg acgtggtcct ggaccaggag atcgctgaat
     1261 cgtttgggac ggtagcgacg ggcgagagag atggtcatga agcgtgaggg aagcgggaag
     1321 agaagaaaag tgcctcaggc accccgaagc gacaccggac atcgcttagc gctgctaccg
     1381 gcgaggtcct gacgcggttc gcgcgccggc gcccttcgga cctgaggcat ctggaatata
     1441 accccgcgga caaggggggt tagcccagaa tggcccgttg gctctggagc atcttcttga
     1501 gctcccaggt ttccgccacc accgctccca gcagaaacac gatggctgtg taatacaccc
     1561 acaggatgaa gaggacgata gcgccgaggt ttgcatcgcc ccccagaccc tcgagggagg
     1621 cgaagttcga cagatacaag gcgtagagtc gtttggccac ttcgaacaag agtgcagtga
     1681 acgtggctgc caggagtgcc gtcttccaag gcagtcggcg gaccgaagcg tagctgtagg
     1741 tcacgtagaa caatgacaca gagaagctga acgcgagtaa ctgtcccaga agccttccca
     1801 ccgtcgatac gaaaaacccg agctgcggga cactggcggc gccgcgggcc tgcagaatgg
     1861 ccagaccggt cgtcaggagg gtgttggcga gaaacagaat cagtgtgccg atgaccatca
     1921 aggcgtcccg aagcttcgcc agcaggaacg tgatgacgaa tgcgcggcgc cgcggcgggc
     1981 ggagcgagac gtcgtagatg tcgttcagtg acgttcgaat accggcaaag agccgggtac
     2041 tgaaccagag gaatgccggg gcagcataca gtgagagctg tccccgtttt ctcgagatct
     2101 tggtcagcag ttgttcgatc acgcccaggg gatcacggtc cggcaacgag gcggagtggg
     2161 gcggaagaaa ccggtgaaac aggtgaatgg tgtcgggttc gggctggtgg gtgacggctt
     2221 gggccagatg ggtcaggccg atcagcagca ggaggataaa aggcactgcc gccagcagcg
     2281 catcgaaggt cagggcgctg gctaaaaacg gaatattgtc ttcatcagcg gcttgcagcg
     2341 tccggcggag gaagccggcg ggagacaggt gccacccgcc gggacggtag ttgttcaggc
     2401 gagcggctcc tccagatcag ccggagaacg tcgccgggcc cgggcctccg ccagccgccg
     2461 ctcgagctct tcgcggggag aaggtgggga gctccgcgag tagcggccct gggtgtctga
     2521 gccctcctcc aggtcatcgt cctcctcgtc ttccaacatc tcatgcagcg attccctggc
     2581 cccgccgaac tgctgggtga tctcgtcgag cttctcctcg gtcattgccc ggagcttcca
     2641 gagcttccgc tgcaggttgc ggcgggtttc ttccccgctg ctgggggcgt agagcaaggc
     2701 aacaccggca ccgagcaatg cgccccagaa cagccacttg gccgatgaat cgccggctcg
     2761 ctccacgaag accacctctc gctgctgctt gcgacgcatg cttcctccta ttccccggcg
     2821 tcggggtcgt cggctgccgc gaccagcacg ggcttgagcg cggcatggtg ctggatcgga
     2881 gcatggatga accggttcac ctgttcctcg gtcccattga cattcagctg ttcgaacaag
     2941 aaagagaacg tcttttccag atcggcggcg atggcactgc gaatgtcctc gggcagagac
     3001 cagacgtcgc gcttgaacgg cccgatcgcc ttcttccggg ccttgtaata gaactgctcc
     3061 tgggtgtctc cgcttttccg ctcgccggcg gcattctcgt ccagccaact gcgcatgcgg
     3121 tcccgcaggt ccgaaggaag tcggggatga tcgaagacga tgttctgaaa gttggtagcg
     3181 aggtggattt cggcggtctc gatccgggga aagttgccga aggcgttcga cggcagggtg
     3241 ctggccccat gctgcacggc tcccgccagt ccatactgct cgcgcgccac ctgggataag
     3301 gcggcgagcg cctgaagatc gagcttcaca tccgcgatgc tgccatcggg caggacaacc
     3361 ccaccatgtg acgtgccggt ctggaccgag atcttgctga tgccaatgta gtcacccagc
     3421 ccggcgaggc tctcgttata tccctgcatg aaggcgtgca actcctcgac ggtgctgttc
     3481 ttcatgccaa cctcaccgat ctcagccccg accgatacgg tgacttcgga gggctcgagg
     3541 cctcgaatga aggcagtgat ttccgcagcg cgctcgtagt tcaggcgctg ctgctccttc
     3601 agggtgggct tggaaaggtc gaccagggtc gaggtgtcca cgtcgatgtt atagaagccg
     3661 gccccgacct cttcggcgat gagcttcttc acctcgccga cttctccttc cgggtcagac
     3721 tggtacttct tgtggttcac ctgacaatgg tcgccctgaa taaagagcgg cagggtatac
     3781 ccttctcgta aggcagcggc aatcaatacc gccacatatt ccgccggccg ctgctcggta
     3841 taggcgatct ccgatcgggc aatctccaga atgatggctc ccgcctttcc ggcgcgggca
     3901 gcccggaaga tcgctcgggc ggtgtcgtag gtgagcatcc ggacattgat ggccggcacc
     3961 gtgaacccgc cgcattcccc tcggccgcgc gcgagataga gatcgttgat ggatgccggg
     4021 cgggctccgg tgacctggcc cagttcccag agcagccagc gcgcagcctc acggtcgttg
     4081 ggctcagcaa agacagcctg ccacgccagg cgatcagtcg cggccgaccg aagcttgttc
     4141 tggtcgcgca acttgatgcc tcccggcacc accacgacgg ccccatcata tcggtctacc
     4201 gcgcgttgtg ttgcatcagc catgcgggcc tatcctcttg taagcagtat ccatcggccg
     4261 ttcgccaaag ctaggccggg aattggagag cgtcaaaccg aggaccggtt tacacctcgt
     4321 cgacgctgga aggggccgaa ggagcgggcg tatcataccc gggccgcccc attgcagcga
     4381 aggtgagccg cttgcctaac tccacgcccg gctggtcgaa cgggtcgatg ccgtaccaaa
     4441 caccggcata cccggttgcg acctgcagga acatcaaagc ttcgccaacc gtcgccgcgg
     4501 aaagatcggg aagccgcagg gtacagttca ttcgacccat ctggccgagg gcagccgagg
     4561 tcgcccggta ctccgcctgg agcaactcgc cgagcgtgtg ccccggcaga tattcgagat
     4621 cactgggtag cgccgaggcg gaaggtcggg ggatctcgac gtcctggccg aaatcctcga
     4681 cggtgacgaa agtgatcacc ttgtcgaacg gcccttccat gaagagttgc acctggctgt
     4741 gttggtctgt ggcccctacg gccgccaccg gcgtgggccc cacgttgacg gttcggcccg
     4801 ctcgatcgac ccgcttgccc agactctccg cccagagctg gcggtaccat tcggcaaagt
     4861 tgcgcaactg atcggcgtag ggcatcacca cgtgtacgtt cgcgcccagc gcgacgtctg
     4921 cctcccaatg aagcgccgcg tacagtgcgg cagggttctg caggaggtcg tcggcctcgg
     4981 agcgattgag ggcatgtccg gctccttcga gcagcccttc gatatcgatg ccgaccagcg
     5041 ccgccggcaa cagtcccacg ggcgacaaga cgctgaaccg accacccaca tcgggaggca
     5101 cgtcgagagt cgcgatgcgc tcacgttgcg ccagctcgcg cagtgcgcca cgcgcgggat
     5161 cggtggtaaa caccagatgc cggtaggccg cgggcccgag cgcctgctcc agccaggcgc
     5221 gcacgaccag atattgggcc atcgtttccg cggtgcctcc cgacttgctg atgacattca
     5281 ccagcacccg acgcggatcg atccgcccca gcgcggccgc aaccgacacc gggtcgatat
     5341 tctccagcac cgtgagccgc gggaaaaaat cccggccttc atcgtccagc tcgttccagg
     5401 ccggcggccg gagggcattg agcagtgcct tcgttcccag ggctgagccc ccgatcccga
     5461 gaaccagcac atgatcgtgc gcctgcccta acccttccgc aaaggtgcga atggctcgca
     5521 ccgtgggccc ctgactcacc aggttgtaga acccatactc cccggcgcct cgacgcttcc
     5581 tgacctcctt ctgaatgtcg ccgaaacgag ctcggagcgc gtcgagacgc gcgcgttcca
     5641 ccccgtgcgt cccgtcgagc tgctcacgaa gcatgcgtcc gtaggagaac gtgatcatgc
     5701 aacctcgacc gttagtccgt cgtaggccgg gagaatgcct gccggcagct tggtctccag
     5761 gtcggcgtgg ccggtctcat gggtgaggtg cgtaagatag gttcgggctg cccccagaga
     5821 ttgcgccgtc tccacggctt cgggaatgct catgtgggtt ggatggggtc gccaccacag
     5881 cgcattgagc accagcacat ccagtccgcg gagccgctca cgttccggag gagagatggt
     5941 cttcacgtcg gtgatatacg caaggttgcc aaaccgatag ccgaacacgc gcagatggcc
     6001 atgttggaag gcgagcggga gaaccgggac gttggcaacg gtgagcatct ggttgggctc
     6061 gatctcgtgc agcgcgagcc ggggcttgga ggtgccttcg tacggacgca cagcatcatc
     6121 gaaaatgtaa ttgaaggacc cgcggagacg ggcgagggtt tctgcgggtc catagatcgg
     6181 aagcggctgt cgctgggaaa aaatccggag gtcgtcgatc ccattgatgt gatcggcgtg
     6241 ctcgtgggta tataccacag catcgatccg ggtaaatccg gcactgagca actggagacg
     6301 gagctcaggg ggtgtgtcga ttaaaatggt cgagccgccc gactcgacca cggctccgga
     6361 gcgggtgcgc ttgtcccgcg gatccgacga gcggcacacc gcgcacccgc agccgatctg
     6421 gggcacgccg aacgacgtgc cggtccccag aaaggtgaga cgcatcgtct aaactgcttc
     6481 gaccttaagg aggttggtag tgccaggcat gtcgaagggg accccggccg tgacgaccac
     6541 ccgctcccca ggctgcgcga gttggcgatc caagatctgc tgccgcgcaa ccgccagcat
     6601 gctgtcgtag ttggctgagt gatcagtaag ggcgggagtg acgccccaca ccagcgaaag
     6661 ctggcggaac gtctcaggct ccggggtgca ggcaaacact gggacggtcg ggcgacaggt
     6721 cgcaactttg cgcgcggtga aaccactact ggtgaagcac acgatcagcg gagccgacaa
     6781 catctccgca gcggcacaga ccgccacggc gatggcatcc tcagtcctga tggggccact
     6841 gggcgatgag cggtgaccct tgagcgcgcc gccttccgtc ccccgccgac ccaaagcggc
     6901 atcaatggtc accccgcgag tctgccgctg gctctccatt tcgcgagcga tgcggtccat
     6961 ggcctgcacc gcctccagcg gataatcacc cacggcggtc tcggccgaca gcatcaccgc
     7021 atcggtgccg tccagaatcg cattcgcgac gtccgacgtc tccgcccggg ttggacgggg
     7081 ggcatgcacc atcgactcga gcatctgcgt cgcagtgatc accggcttcc catgcagccc
     7141 tgcttcccga atgatttgct tctggatcaa ggggacctct tcaaagggca gctcgacgcc
     7201 gaggtctccc cgggccacca tgattgcatc ggaggcatcc aggatagcgc agagattttt
     7261 gatggcggtg tccttctcga tcttggccac cagcttgatg ccacggggta ccagagtgcg
     7321 cagctgttcc agatcctccg gccgccggac aaaggatagg gcgatatagt cgacaccgag
     7381 tgcggctacc tggccgacat cttccacgtc cttctcagtc agcgccggag cgctgacttc
     7441 gataccggga agattcatcc ccttataggc cttgagctca cctccatagt gcacgactgc
     7501 ctcgacccgc tcttcgtgca ccccccggac ctccagtgcg agcagcccat cgtcgagcag
     7561 gatggtggct ccgacccgca cgtcgcgcgc aaggtcatcg taggtcgtcg gaatttcacc
     7621 gtcatgcgcg ttctcctcgg gagcgaac
//
LOCUS       DASRPQ010001301         1535 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1414244, whole genome shotgun sequence.
ACCESSION   DASRPQ010001301 DASRPQ010000000
VERSION     DASRPQ010001301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1414244"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            286..612
                     /locus_tag="VFD73_14960"
     CDS             286..612
                     /locus_tag="VFD73_14960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75297.1"
                     /translation="MSDAAGCECWCENISLPPLTKLRVREARDPEAYVNFSASGMPLV
                     RLAELFDDLFPGQILMPVSKMHEKVTTDEELRQIKLGDLVEYLGLVPVRRPLQGRATP
                     PADAEV"
     gene            764..1006
                     /locus_tag="VFD73_14965"
     CDS             764..1006
                     /locus_tag="VFD73_14965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75298.1"
                     /translation="MLSWLALAARSSSSKDVEILALRHEVAVLRRANPRPRMSWTDRA
                     VLAALTRTMPKGLPARRIVTPGTLLRWHISAKLASR"
     gene            1048..1239
                     /locus_tag="VFD73_14970"
     CDS             1048..1239
                     /locus_tag="VFD73_14970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75299.1"
                     /translation="MLDVPLPAPNSVDDSGIIIDDGDAWFDMWVSLAEEVIEKMHGKH
                     GFLFDKDQALDRMRSGIRR"
BASE COUNT          277 a          459 c          500 g          299 t
ORIGIN      
        1 ccgctaggtc ctcgcgtgtc atctcggaca gtggcaccgg tgccctccga tcacggcggc
       61 ggcggatagc cgctccgcgc gggtagggca agggcaggcc gcacgacctc atggaccgag
      121 cgctggagga cacggcatta actctgttct tcccgtctgt gtacgcgtac gatctgaatt
      181 cgggccggga gactcgggtc gtctcgtctt cgcaacgggg gagcgaacat gcctgaatgc
      241 cagttggacg actgcgggat cagttgcgag ttcggatgct cgtgcatgtc cgacgcggct
      301 ggatgcgagt gctggtgcga gaacatctca ctgcccccac tcacaaagct ccgggtacgg
      361 gaggccagag atccggaggc gtacgtgaat ttctcggcgt cgggcatgcc gttggtgcgc
      421 ctggcagagc tgttcgacga tctgtttccg ggccagatcc tgatgccggt ctccaagatg
      481 cacgagaagg tcaccaccga cgaggagcta cgtcagatca agctcggcga tctcgtcgag
      541 tatctcgggc tggtgccggt ccggaggccg ctgcaaggac gtgccacccc gcctgccgac
      601 gccgaggtct gaaactctgc accggcacgc cgctgcaacg cggctctgat atgggtggcc
      661 tgtagtggcc gaatacttag ccgctgggtt tgacccggga ctacggcacc ggcatcatcg
      721 gcacccgttt gtgtcgcgct gacttgcccg cctgctggcg accgtgctgt cctggctcgc
      781 gctggcggcc cggtcctcgt cgtccaaaga cgtggagata ctcgcgctgc ggcacgaggt
      841 ggccgtgcta cgccgggcga accccagacc acgcatgtcc tggaccgacc gggccgtgct
      901 cgccgcgctc accaggacca tgccgaaagg gctgcccgcc cggcggatcg tgactcccgg
      961 cacgctactg cgctggcaca tctccgcgaa gctcgcatca aggtagacca gagcctgcag
     1021 tctctgctga ttcgccgtag aggccaagtg ctcgacgtcc cgctccccgc tccgaactcg
     1081 gtcgacgact cagggatcat tattgatgac ggtgacgcct ggttcgacat gtgggtgagt
     1141 cttgccgagg aagtcattga gaaaatgcac ggcaagcacg ggtttctctt tgacaaggat
     1201 caggcacttg accgaatgcg aagcgggatc agacggtaga ggcgagcatc aagacccttc
     1261 agtcctgtgc agtgcatgca tagctcaacg gtctggacct cttataagcg ctgttctggc
     1321 cttggctggt aatactccta gcagagcgtg ctgaaaagct gctgtgtgca tattggactg
     1381 ataacgtcgg gaatgctgat ttccgttagt atgacgattc tgcgagaagt agacacactc
     1441 gcgtcggcat gaccgtatcc agcgccgggt ggccgtgcat gagaatgcga gccggggtag
     1501 cgcgggcaga ttggtcctgc ggtatggctg ccagg
//
LOCUS       DASRPQ010001302         1148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_778282, whole genome shotgun sequence.
ACCESSION   DASRPQ010001302 DASRPQ010000000
VERSION     DASRPQ010001302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_778282"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(79..152)
                     /locus_tag="VFD73_14975"
     tRNA            complement(79..152)
                     /locus_tag="VFD73_14975"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(116..118),aa:Lys,seq:ctt)
     gene            complement(172..242)
                     /locus_tag="VFD73_14980"
     tRNA            complement(172..242)
                     /locus_tag="VFD73_14980"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(208..210),aa:Gly,seq:tcc)
     gene            complement(259..330)
                     /locus_tag="VFD73_14985"
     tRNA            complement(259..330)
                     /locus_tag="VFD73_14985"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(295..297),aa:Pro,seq:cgg)
     gene            complement(508..579)
                     /locus_tag="VFD73_14990"
     tRNA            complement(508..579)
                     /locus_tag="VFD73_14990"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(546..548),aa:Trp,seq:cca)
BASE COUNT          235 a          366 c          346 g          201 t
ORIGIN      
        1 gcggaaggcg cgattcgaac gcgcaagccg cgaggtctga gctcgcgagg tatcccggtt
       61 cccgtcactc ccgcatcgtg cgccaccagg gacttgaacc ccgaaccatc agcttaagag
      121 gctgccgctc tgaccaattg agctagtggc gcgcaccata ggctgacacc gagcggatgg
      181 agagagtcga actctcatta tcagtttgga agactgaagt cctgccgttg aacgacatcc
      241 gcctagaacc actgaccgtc gggaagcagg gactcgaacc ccgtccatcc ggccccgaac
      301 cggaggcgct aacccttaca ccacatcccg ttgagtggag atggccggaa tcgaaccggc
      361 tacggcaacg cttgcagggc gcgcccgctc cttagctgtc acccccacgg gcaggcctcg
      421 gcggtgcttt cacacgggct ctggcctgcc gtttcatggt gctcacacta tggacgtgtc
      481 aataaccaag cctgtattaa aggcacgcag ggacggcagg agtcgaacct gcatttcgcc
      541 ggttttggag accagatgcc tatccgctgg ctcatcccca ggtaaatgaa aaccgccccg
      601 agggattctc cctgggacgg ctgccggtaa gtgcctgctg gacgcttaca tggcaaccac
      661 gccacgccga ttgctgaaca gggcagcatc gagtgacgag tccgggtgca tgtaccccgc
      721 tcgtttcagc gcctgccacg tcgtcatgaa tccatggtaa gtcttcacat agaagggagc
      781 aattgtattt tccggcttat tcctccgcgg gtaccggggg tccggtggcg gttcacgctc
      841 ggggccggcc aggggcctgc gcccggcgag ccgtaccgag tatcgacaag ccgagtgtcg
      901 acaagctgtg gataaagccg tggataacta cccagattct gtggacgccg tgtggacgcc
      961 ggaaaaacag caggtgaacg aggtcagctt ttcgcgcagg cttgtgcgcg atccgcacac
     1021 ccgcgcccgc gcccgcgcca taaacgtaga ccgacagcac gggcagacaa ggcccccttc
     1081 atctcataca tgaagggggc ctgctcgcag tgtgccgcat ccggccacgg ggacccggca
     1141 ggcgcgcc
//
LOCUS       DASRPQ010001303         2581 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3614029, whole genome shotgun sequence.
ACCESSION   DASRPQ010001303 DASRPQ010000000
VERSION     DASRPQ010001303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2581
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3614029"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..394)
                     /locus_tag="VFD73_14995"
     CDS             complement(<1..394)
                     /locus_tag="VFD73_14995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75300.1"
                     /translation="MSEFNFAFRPASYWEHTSPLAAILSNIKGQNRRRMVRDYLTGVR
                     RSETGIHPGYLEAELDEKTRSWLGSHHPSWMGGEYLPRYLPGEVEIARIALDSTTQDV
                     ISFRARRRRAGRRILYRVVDEYPQGADWT"
     gene            625..828
                     /locus_tag="VFD73_15000"
     CDS             625..828
                     /locus_tag="VFD73_15000"
                     /inference="COORDINATES: protein motif:HMM:NF021560.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2283 domain-containing protein"
                     /protein_id="HZI75301.1"
                     /translation="MKLHYYRDTDSLYIDLCDRPSAESREVAPGVVLDFDATGVLVGI
                     DIDQASRNLDLTRVETVALPLAR"
     gene            complement(1130..1744)
                     /locus_tag="VFD73_15005"
     CDS             complement(1130..1744)
                     /locus_tag="VFD73_15005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75302.1"
                     /translation="MRNVFLFSLPLIIIAAAGCGSPPKEPTTGSDLERDLALVSKAPE
                     TAVASALELGEVRIQPGKPGRNVSLHRVVRSRPAHRATTNAAVAVRAAPIARPVVVDV
                     AVPRPAAQPAAAAPADSHELLPGKTVTVIPVSSGPSTAGDGSRPDDIPLMAGTGGSGM
                     GGGGSGMGGGGSGMGGGGSGMGGGCPGRGQPGIGIASRPRGILY"
     gene            1898..2218
                     /locus_tag="VFD73_15010"
     CDS             1898..2218
                     /locus_tag="VFD73_15010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75303.1"
                     /translation="MATQTKAPPADPTVVDPKHYNVELENEQVRVLRISYGPGENSVM
                     HSHPAAVAVCLTDADVRFGRPDGTSQEVHFKAGQVMSTAAEEHLPQNVGDRPFEILLI
                     ELKR"
     gene            complement(2359..>2581)
                     /locus_tag="VFD73_15015"
     CDS             complement(2359..>2581)
                     /locus_tag="VFD73_15015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75304.1"
                     /translation="VGASAELDLIGDEIMHLVKVMDGFNRYRFAEQGEVLAEWESASN
                     VFGPVRSNGEKSAPPEEVPPASGESRPAA"
BASE COUNT          497 a          826 c          810 g          448 t
ORIGIN      
        1 aggtccagtc ggctccttgg gggtactcgt cgaccacgcg atacagaatc cggcggcctg
       61 cgcgacggcg acgcgcccgg aagctgatca cgtcctgggt cgtggagtcg agtgcgatcc
      121 gggcgatctc cacctcgccg ggcaggtaac ggggcaggta ttccccgccc atccagctcg
      181 gatggtggga gccgagccag gatcgggtct tctcatccag ctcggcctcg aggtagcccg
      241 ggtggattcc ggtttccgat cgtctcacgc cggtcaggta gtcgcgcacc atgcggcggc
      301 ggttctggcc cttgatgttg gagaggatgg ccgcgagcgg gctggtgtgc tcccagtagg
      361 aagcggggcg gaaagcgaag ttgaactcgg acatgacgat gccctttcga tcacgggcac
      421 tctcgttcgc gcatggttct tctcgccgtc tctgcgccgg ccactgagac ggaggtggcc
      481 aggtgcttca ctgtaagaga ctaatttggc ggatcaagca gcagtcaagc ggttctatct
      541 gcagagctcc tggatagagc tcaacaaccc gcataccgtt cataatgcat ttccagaccg
      601 ggacttccct ccaggacgca acgtatgaag ctgcactact atcgcgatac tgacagcctc
      661 tacatcgacc tgtgcgaccg gcctagcgcg gagtctcggg aggtcgcgcc tggggtggtg
      721 ctggatttcg atgctactgg ggttcttgta gggatcgaca tagatcaggc cagccgcaac
      781 ctggacctca cccgagtgga aacagtcgcg cttccccttg cacgatgaac aatgagagtg
      841 aataggaatt tgcggtttgt atcgataaca ccgattacac tgcggcactc gaggtcagaa
      901 agatctatca ggtcctgccg gacgctgccg ccgcggcacg ctcctatctg cgaatcatag
      961 atgaatcagg cgaggactac ctgtatccgc gaaggatgtt tcgccaatcg aagcaggaag
     1021 accagtcggc tcacgtcatc caagaggtaa cgtgtcgccg caggtcagct cacaaacgcg
     1081 aaccgccggc gggcgccggc ggtcatgaag gtgggatggc agagtcggtc tagtagagta
     1141 ttccgcgcgg gcgagaggcg ataccgattc cgggctgacc ccgaccgggg cagcctccgc
     1201 ccatgccgct gccgcctcca cccatcccac tccctccacc acccattccg ctgccaccac
     1261 cacccatgcc acttccgccg gttccggcca tgagcgggat gtcgtccggg cggctcccgt
     1321 cgcccgcggt cgagggaccg ctactcaccg ggatgacggt gacggtcttc ccgggcagga
     1381 gctcgtggct gtccgccggg gccgctgccg ccggctgggc tgccggacgg ggaaccgcaa
     1441 catcgacgac taccggccgg gcgatcggtg ccgcgcgaac ggccacggcg gcgttggtcg
     1501 tcgcccgatg ggccggccgg gatcgaacga ctctatggag cgaaacgttg cgacccggct
     1561 tccccggctg aattcgaacc tctcccaatt cgagagccga ggcgacggcg gtctcaggtg
     1621 ctttgctgac gagggcgaga tcccgctcca aatcggaacc ggtagtcggc tccttgggtg
     1681 gggagccgca cccggcggca gcgatgatga tcaggggtaa cgagaacagg aagacgttgc
     1741 gcatcgagac ctccaaaacg cagaaccggc ctgcttcaca ctagggaatt ccgcgccaac
     1801 ccacaagagg tgcacgatcg caagacaccg gtgactcccg atattgccac gccgcgacat
     1861 cgacagtagt ctcaacatcc cctacaagag gcctcgaatg gctactcaga caaaggctcc
     1921 gccagcagac ccgactgtcg tcgatcccaa gcactacaac gtcgagctgg aaaacgaaca
     1981 ggtccgggta ctgcgcatca gctacggtcc aggtgagaac tccgtgatgc actctcatcc
     2041 tgcggcggtg gcagtttgcc tcacggacgc ggatgtcaga ttcgggaggc cggatggaac
     2101 gtcccaggag gtccacttca aggctggcca agtaatgtcg accgcagcgg aagagcactt
     2161 gccgcaaaac gtgggcgatc ggccgttcga gatccttctg atagagctca agagatagcg
     2221 caggaaaggc tgttacgggg gtaggaaacc gccgccgaga ttcgcgactg ctcgggcggt
     2281 cagtcggtca gtcggtcagg cggccaggca ctcgaaatta cccagagccc gtccgcccga
     2341 ccgaccgtcc gaccgccttc acgccgccgg ccgggattcg ccgctagcgg gcggcacctc
     2401 ctccggcggg gctgacttct cgccgttgct gcggaccggg ccgaacacgt tgctggcgct
     2461 ctcccactcc gccagcacct cgccctgctc ggcaaagcgg tagcggttga atccgtccat
     2521 caccttcacc aggtgcatga tctcgtcgcc gatgaggtcc agctcggcgc tcgcccccac
     2581 g
//
LOCUS       DASRPQ010001304         1145 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2968641, whole genome shotgun sequence.
ACCESSION   DASRPQ010001304 DASRPQ010000000
VERSION     DASRPQ010001304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2968641"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            55..125
                     /locus_tag="VFD73_15020"
     tRNA            55..125
                     /locus_tag="VFD73_15020"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:87..89,aa:Gln,seq:ctg)
     gene            281..357
                     /locus_tag="VFD73_15025"
     tRNA            281..357
                     /locus_tag="VFD73_15025"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:315..317,aa:Thr,seq:ggt)
     gene            359..433
                     /locus_tag="VFD73_15030"
     tRNA            359..433
                     /locus_tag="VFD73_15030"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:392..394,aa:Gly,seq:gcc)
     gene            435..518
                     /locus_tag="VFD73_15035"
     tRNA            435..518
                     /locus_tag="VFD73_15035"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:467..469,aa:Leu,seq:cag)
     gene            520..605
                     /locus_tag="VFD73_15040"
     tRNA            520..605
                     /locus_tag="VFD73_15040"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:553..555,aa:Ser,seq:gct)
     gene            611..698
                     /locus_tag="VFD73_15045"
     tRNA            611..698
                     /locus_tag="VFD73_15045"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:644..646,aa:Ser,seq:gga)
     gene            703..792
                     /locus_tag="VFD73_15050"
     tRNA            703..792
                     /locus_tag="VFD73_15050"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:738..740,aa:Ser,seq:cga)
     gene            798..883
                     /locus_tag="VFD73_15055"
     tRNA            798..883
                     /locus_tag="VFD73_15055"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:832..834,aa:Ser,seq:tga)
     gene            885..958
                     /locus_tag="VFD73_15060"
     tRNA            885..958
                     /locus_tag="VFD73_15060"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:919..921,aa:Ile,seq:gat)
     gene            998..1071
                     /locus_tag="VFD73_15065"
     tRNA            998..1071
                     /locus_tag="VFD73_15065"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1031..1033,aa:Ile,seq:cat)
BASE COUNT          197 a          360 c          389 g          199 t
ORIGIN      
        1 tggtcggctc aaatccggcc gtttgggagt tcgaatctcc ccacccgcac tcaatgcccg
       61 gtcggctaat ggcaggcctc ctgaccctgg atcaggctat cgaggttcga gtcctcgctg
      121 ggcagctcac gccgccgcgc acggctgcgg ctccgccttc gtacggcgga tggcccgggt
      181 cggcaccggg agacggctcc attccggggt gggttgctgg catcctcggc cggtccttga
      241 aatcggtgcc cgcaggttga agtcctgctc ccagaacgtt gcctctgtag ctccagtgga
      301 cagagcgccg cctcggtaag gcggaggtcg tgagttcgaa tctcaccgga ggctccatgt
      361 ggccgtagtg tcagcggcag cacgcgacct tgccatggtc gtagggcgag ttcaaatctc
      421 gccggccact ccaagcgctg gtggcggaat gcagacgcgc gggccccaga agtccgtgtc
      481 ccgaaagggg cgtgagggtg caagtccctc ccggcgtacg gaaggctggc cgagctggta
      541 aggcacccgg ttgctaaccg gaggtcgggg cgagccccgc gggcgttcga tccgctcgcc
      601 ttccgcggat ggagagtgtc cggatggcac gaggggcacc gttggaagcg gtgcagggcg
      661 tgacgatcgc ttcgggagtt cgaatctctc actctccgca ctggagcggc tagccgataa
      721 gccgacggca cctgtcccga aaacaggcga gcggtggaag ccgccttgtg ggtgcgattc
      781 ccacccgctc cgcacatgga tgcgcaatcc gactggcgac ggaacccggc ctgaacccgg
      841 gcgagcttca cggccttgca gggttcgatt cctgccgcat ccgctggctc gtggcgcacc
      901 gagttagcgc actcgcctga tacgcgagag gtagggggtg caagtcctcc cgagccaacc
      961 cagccctggt cttacgagtg accggccagg gccggatggc ggcgtagctc aggtggtaga
     1021 gcacctcgct cataacgaga aggtccgcag gttcaagtcc tgccgccgct actggaggta
     1081 accatgaaga tcaaacaggc cgtcgggata cgcacctgac gggccgttag ttcaatggca
     1141 gaatc
//
LOCUS       DASRPQ010001305         1277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_463351, whole genome shotgun sequence.
ACCESSION   DASRPQ010001305 DASRPQ010000000
VERSION     DASRPQ010001305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_463351"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..253
                     /locus_tag="VFD73_15070"
     CDS             <1..253
                     /locus_tag="VFD73_15070"
                     /inference="COORDINATES: protein motif:HMM:NF020317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GYD domain-containing protein"
                     /protein_id="HZI75305.1"
                     /translation="LEAVRPVVEKLGGKFEHAWLAFGEYDIVGVVELPENTDAAAFAM
                     AVAAGGACKAFKTTPLLSVEEGVEAMRKAQGAGYRRPGG"
     gene            737..916
                     /locus_tag="VFD73_15075"
     CDS             737..916
                     /locus_tag="VFD73_15075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75306.1"
                     /translation="MTYSRQRIVEVFRRAGMDDIADAALATLPERVDYETADKFCAAH
                     NLTVGFLMDRMGGTL"
BASE COUNT          211 a          394 c          439 g          233 t
ORIGIN      
        1 gctcgaggcg gtccgtccgg ttgtcgagaa gctgggcggg aagttcgagc atgcgtggct
       61 ggccttcggc gagtatgaca tcgtcggcgt ggtggagctg cctgagaaca ccgatgccgc
      121 cgcgttcgcg atggccgtcg ccgcgggtgg ggcttgcaag gcgttcaaga ccaccccgct
      181 gctgagtgtg gaagaaggag tcgaggccat gcgcaaggcg caaggggcgg ggtatcgtcg
      241 gcccggcgga tagcgcccct gccgatcatc cactcagcca accgggacac agctacgata
      301 cgcacgccgt gcagctccga ggagttgagt cagtaaccgg ctgctgagaa ggccggtttg
      361 cgcagcggtc agcctgcctg tctgctggtg agccggtgta tcgggttgcc cgggagcgac
      421 cgtgagttcc gccatcgacc ggccgatcgg gcacgcaata ggtacgtact ttgcgtcggg
      481 agcatctgat ccgtagatca atgccgcccg tccggtaagt gcgccagagt ccgtaactgc
      541 aggtcagggt ccactggatg tccagactgt ccgccctggt ccggcggtgt ccggtcagtc
      601 tgtgagaaat ctgtgagagg tcgctgtctc agctcatgct gggaagcttt tgcccggaca
      661 catggttttc cggtgacagg cacgccctgg gcggagcaag gccggagcca gtatctgtaa
      721 gtggggtggt cccctcatga cctattcccg tcagcgcatc gtggaggtgt ttcgccgagc
      781 cgggatggat gacatcgctg acgcagccct ggcgactctc cccgagcggg tggactacga
      841 gaccgccgac aagttctgcg ctgcacataa cctgaccgta gggttcctga tggaccggat
      901 gggcggcact ctgtaaacag ccggtgctac ggcttgtgtc cggcggctgg gccctgcggc
      961 caccgcgggt ggcctgtcaa cgccgacccc ctgcttgcaa agtgacgtat acacccgcgt
     1021 tagtggtctt aacctgcaca accggctgcc cctgagtgac cgtgatgtac cgctacggac
     1081 cggggctaat ggcacgggca acaggcaccg gaggccatcg ccacctgcgg gcgagggatc
     1141 tggcctcggg ccgtgtcagc ctgaccctgt cgccgggtat taccgccgta caggagctgt
     1201 tccgcccggc caccaggagc cgcctggccc ctggatcctg ggccggtgct aattgcccgc
     1261 tgcggaggca cccgacc
//
LOCUS       DASRPQ010001306         1757 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2342277, whole genome shotgun sequence.
ACCESSION   DASRPQ010001306 DASRPQ010000000
VERSION     DASRPQ010001306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1757
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2342277"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..339)
                     /locus_tag="VFD73_15080"
     CDS             complement(<1..339)
                     /locus_tag="VFD73_15080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75307.1"
                     /translation="MSPTRREVLAQLAALAVLPLPGWVRSEQDPLDGTIADYQAGRRR
                     RAWTAAEVTARALDRCHAEGMRWHAIDEFSSHAVADAQAADKRLQAGRLRGPLDGVPV
                     FAKAIYDMEGL"
     gene            complement(398..901)
                     /locus_tag="VFD73_15085"
     CDS             complement(398..901)
                     /locus_tag="VFD73_15085"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HZI75308.1"
                     /translation="MTHLTRMSSTVMRPELAPLLRELHGLLTGPEPRQVKAARAAAAI
                     AEAGKYRWVGLYDVGPADIRVIGWAGPCAPTYPVFPRNQGLNGAAVESGGPVIVQDVR
                     QDVRYLTTFGSTRAEMIMPVRVKAYGAVVGTIDVESERVQAFSNRDRDLLGACAAALA
                     ELWRGPL"
     gene            986..>1757
                     /locus_tag="VFD73_15090"
     CDS             986..>1757
                     /locus_tag="VFD73_15090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75309.1"
                     /translation="MKPLRICCAALLFLSLARSGMAQSVGTVEFGVLLQDSYFDRSLG
                     LDQAKGGPGARVGFFVLPNIDIEAEAAFVPNDNRSGHLYYIPLRARLVLNVPSGEHGA
                     LFLGGGYVRDEYRDDVRFHDNGAEAVVGARVGLPGTTTLRFASYLDYIPSPSNGAGDN
                     LNWGLQAGLSWLLGGRARNVTKAGQPAPSARQDSLALAARRDSLARAAQADSLKRAQQ
                     TRDSLARAQQAEQQRVQDSVSKIRAQQQALRDSLANAAR"
BASE COUNT          328 a          551 c          558 g          320 t
ORIGIN      
        1 aagcccctcc atgtcgtaga tggccttggc gaataccggc acgccatcga gcgggccgcg
       61 cagtcggccg gcctgaagtc gcttgtccgc agcttgggca tcggctacag cgtgactgga
      121 aaactcgtcg atcgcgtgcc atcgcattcc ctccgcgtgg cagcggtcga gtgcccgggc
      181 ggtgacctcg gccgcggtcc acgcgcggcg acgccggccg gcctggtaat cggcaatggt
      241 gccgtccagc ggatcctgtt cggaacggac ccacccgggc agcggaagga cagcaagagc
      301 agcgagctga gccaggactt cgcgtcgagt cggcgacatg gcgttagagc agagcgatga
      361 aagaattggg gcccgagtgg ttcgggaaga ttgctgctta cagtggaccg cgccagagtt
      421 cggccaaagc tgctgcgcag gcgccgagca ggtcgcgatc gcgattagag aaggcttgaa
      481 ctctctcgct ctccacatcg atggtgccta ccaccgcacc ataagccttc acccggaccg
      541 gcatgatcat ctccgctcgg gtcgagccaa aagtggtcag gtagcggaca tcttgtctca
      601 catcctgcac gatcaccggt ccgccgctct cgaccgctgc tccattcagc ccctgattgc
      661 gaggaaaaac cgggtaggtc ggtgcgcacg ggccggccca tccgatgact cggatgtccg
      721 ctgggcccac gtcgtaaagt ccgacccaac gatactttcc agcttcggcg atggcagccg
      781 cagctctcgc tgcctttact tggcgcggct ccggaccagt gagaagaccg tgcagttccc
      841 gcaggagcgg tgcgagctct ggcctcatga ctgtgctcga catcctggtg aggtgggtca
      901 cgttcttctc tcgaagaacc acatagcgta acggcgtgac aaaatcgtaa ccgctaacgt
      961 cctgccgatg tagtgaggag ctggtgtgaa acccctcaga atctgttgcg ccgcgctgtt
     1021 gtttctctcc ttggcccgat cgggaatggc acagagcgtg ggtactgtcg agttcggtgt
     1081 gctgctccag gatagctact tcgatcggag tctcgggttg gaccaggcca agggtggccc
     1141 gggtgcgcgg gtcggtttct ttgttctgcc gaatatcgac atagaggccg aggctgcatt
     1201 tgttcccaat gacaaccgca gcggacacct ctactacata cccctccggg ctcgcctcgt
     1261 cctcaacgtc cccagcggag aacacggggc cttgtttctg ggcggcggct acgtgcggga
     1321 cgaatatcgg gacgacgtgc gcttccatga caatggtgcg gaagcggttg tcggtgcccg
     1381 ggtgggcctc cctggtacca ccactctacg gtttgccagt tatctcgact atatcccgtc
     1441 gccgagcaac ggagcgggcg ataacctgaa ctggggactt caggccggcc tcagttggtt
     1501 gttgggcggc cgcgctagaa acgtgaccaa agccgggcaa ccagcccctt cagcgcggca
     1561 ggacagcctg gcactcgcgg cgcggcggga ctctctggct cgagcggcgc aagccgactc
     1621 gctgaaacgc gctcagcaaa cgcgcgacag tctcgcccgt gcccaacaag cagaacaaca
     1681 gcgggtgcag gacagcgtca gcaagatccg agctcagcag caggcgttgc gtgacagcct
     1741 ggccaacgca gcccggc
//
LOCUS       DASRPQ010001307         2415 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3309864, whole genome shotgun sequence.
ACCESSION   DASRPQ010001307 DASRPQ010000000
VERSION     DASRPQ010001307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3309864"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="VFD73_15095"
     CDS             complement(<1..185)
                     /locus_tag="VFD73_15095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75310.1"
                     /translation="MQRRRRQHSHWGSLTAGLALSVTLLAAVCSSAVAQQPDTVVVDS
                     NRVRKLPEITVTRAPEP"
     gene            273..1370
                     /locus_tag="VFD73_15100"
     CDS             273..1370
                     /locus_tag="VFD73_15100"
                     /inference="COORDINATES: protein motif:HMM:NF044507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75311.1"
                     /translation="MDARPTSASMPDFNQPPFAGAPDARFAPLPADGVLPEGFFSTSN
                     LPTYIRMDGTWMAPTRPRMDCVVVKRSGFLETIEPRRLRRGDLVAMGEAEDGTEGIVV
                     YASGFLGGGHGVNEFRFMSTEVSRERPVNYEELAARVSDEKRRGGYLIWVIGPALVHS
                     RARSDFEWFIRNGFVQAVLAGNAVAVHDLEAAIFGTTLGMSNTGQPTEGGHGLHMRAI
                     NRVRAAGSIERAVETGLIKSGIMHALVTHHIPYVLAGSIRDDGPLPGVLSDNLAAQDA
                     MREHTVKATGAIFVATALHAIAVGNMLPAFYLCDGVPMPLMTICVDQTEFVVNKLRDR
                     GTHQAYGVVTNAQDFMHVLRFYTERREQVPA"
     gene            1367..1768
                     /locus_tag="VFD73_15105"
     CDS             1367..1768
                     /locus_tag="VFD73_15105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75312.1"
                     /translation="MTARGLAGSLTGWDQLAHAVAERIPPAEVDAIWTFAPLRRGANE
                     WGTAVVSRIEGERRRIYTARYTKTIRGKERGKFEATIQEVGTGPVEVLSRVLQDAQHR
                     TDDDHPPIAVPPNDWFAALPADAAGSNGPPG"
     gene            1752..2222
                     /locus_tag="VFD73_15110"
     CDS             1752..2222
                     /locus_tag="VFD73_15110"
                     /inference="COORDINATES: protein motif:HMM:NF013629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HZI75313.1"
                     /translation="MARLDKAEGAALLERFRRHLRDHRQPITRQRDLIARVVLLSEDH
                     LSVDAIRRQLKETGERVGTATVYRTLDLLVQSGLVRAHEFGEGFKRYEPMPGQDDHEH
                     LICERCGRVVEFANERLERMLPVLADEHGFQHRRHRVEVYGVCHACLRGELAAL"
     gene            2219..>2415
                     /locus_tag="VFD73_15115"
     CDS             2219..>2415
                     /locus_tag="VFD73_15115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HZI75314.1"
                     /translation="MSEPVTLGIVVAFVAGVLSFLSPCVLPLVPSYIGFLTGMTLPEI
                     GSRRRAALLHALLFVLGFSLV"
BASE COUNT          425 a          762 c          771 g          457 t
ORIGIN      
        1 aacggctccg gcgcgcgagt gacggtgatc tccgggagct tccgcacccg gttggaatcg
       61 accacgaccg tgtccggctg ctgcgccacc gcggatgagc aaaccgccgc gagcagcgtg
      121 acgctcaggg cgaggcctgc agtcagagat ccccaatggc tgtgttgtcg tcttcggcgc
      181 tgcatagcgg ctcctctctc ggcgaaacct aatgcagtcc gaagcgtgca gcatgcttga
      241 atacgccatc tcctcactct acgttccaag ccatggacgc tcgtcccact tccgccagca
      301 tgccggattt caaccagccc ccctttgcgg gagcacctga cgcccgcttt gctcccctgc
      361 cggccgacgg tgtcttgccc gaaggctttt tttctacctc caatcttccc acctatatcc
      421 ggatggacgg cacatggatg gcgccgacgc gtccgcggat ggattgcgta gtggtgaagc
      481 ggtctggttt tctggaaacc atcgagccac gccggcttcg gcgcggcgac ctggtggcga
      541 tgggtgaagc cgaagacggc accgaaggca tcgtcgtgta tgccagcggg ttcctcggcg
      601 ggggacacgg ggtcaacgag tttcgcttca tgtccaccga agtgagccgc gagcgtccgg
      661 tcaactatga ggagctcgca gcccgggtga gcgatgaaaa acgccgaggc gggtacctga
      721 tctgggtcat tggcccggcg ctggtacact cgcgagcccg ctccgatttc gagtggttca
      781 ttcgcaacgg ttttgtacag gctgtactcg cgggcaacgc cgtcgcggtg cacgatcttg
      841 aagcggcaat cttcggtacg acgctgggca tgagtaacac cgggcaaccc accgaaggag
      901 ggcacggcct ccacatgcgt gccatcaacc gggtccgtgc ggcgggatcg atcgagcgag
      961 ccgtggaaac cgggttgatc aagagcggca tcatgcacgc gctggtcact catcatattc
     1021 cctacgtgct cgccggttcg atcagggatg atggcccctt gcctggggtc ctgagcgaca
     1081 atcttgcggc ccaggacgcc atgcgcgagc acacggtcaa ggcgacaggg gcgatattcg
     1141 tggcaacggc actgcacgcc attgccgtcg gcaacatgtt gccggccttc tatctctgtg
     1201 atggtgtacc catgccgctc atgaccatct gtgtggatca aaccgagttc gtggtcaaca
     1261 agctgcgcga tcggggaacc caccaggcgt atggcgtggt gaccaatgcc caggacttca
     1321 tgcacgtact ccggttctat accgaacggc gagaacaggt gccggcatga ccgcccgagg
     1381 tctggccggc agcctcactg gctgggacca gttggcgcac gccgttgcgg agcgcattcc
     1441 gccggctgag gtggacgcga tatggacctt tgctccactg cgtcgcggcg cgaacgagtg
     1501 gggcaccgcg gtcgtctccc gaattgaagg agagcggcgg cgcatctaca ccgcccgcta
     1561 caccaagacg atcaggggaa aggagcgggg aaagtttgag gcaaccattc aggaggtcgg
     1621 caccggaccg gtcgaggtgc tgagccgagt cctgcaagac gcccaacatc gaaccgacga
     1681 cgatcaccct ccgattgccg taccccctaa cgactggttt gctgcactcc cggccgatgc
     1741 tgccgggtcc aatggcccgc ctggataagg ccgagggtgc ggcccttctg gagcgctttc
     1801 ggcggcacct ccgcgaccat cgtcagccca tcacccgcca acgcgatctg atcgcgcgag
     1861 tggtcctcct atccgaggac cacctctccg tcgacgccat tcgacggcaa ctcaaggaaa
     1921 ccggagagcg agtgggaacc gctacggtgt accgcacgct cgatctcctg gtgcagagcg
     1981 ggctggtgcg cgcccacgag ttcggagagg ggttcaagcg ctatgagccc atgcccggcc
     2041 aggatgatca cgaacacctc atctgtgagc ggtgtgggcg ggtggtggag ttcgccaacg
     2101 agcggctgga gcgcatgctt ccggttctgg ccgacgaaca tggtttccaa caccgacgcc
     2161 accgggtcga ggtctatggc gtgtgtcatg cctgcctcag gggagagctg gcagcgctgt
     2221 gagcgagccc gtgacgctcg gcatcgtggt ggcgttcgtg gctggcgtgc tcagcttcct
     2281 ctcgccctgc gtgcttcctc tcgtcccctc ctatatcggc tttcttaccg gaatgacgct
     2341 gccggagatc ggaagccgac ggcgagcggc tctgctgcac gctctcctgt tcgtgctggg
     2401 tttttcgctg gtgtt
//
LOCUS       DASRPQ010001308         2393 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3614165, whole genome shotgun sequence.
ACCESSION   DASRPQ010001308 DASRPQ010000000
VERSION     DASRPQ010001308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2393
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3614165"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..1234
                     /locus_tag="VFD73_15120"
     CDS             113..1234
                     /locus_tag="VFD73_15120"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HZI75315.1"
                     /translation="MPRKVSKEAKKIRYAVVGLGHIAQVAVLPAFAHAENSELAALVS
                     DDPEKRAKLGRKYKVKAFSYAEYDDCLRSGRVDAVYIALPNHLHREYSERAARAGVHV
                     LCEKPMAVTEEDCRSMIRTAQEHNVKLMVAYRLHFQEANLKAIDIVQSGRLGDPRLFN
                     SVFTMTVKEGDIRLNPRELGGGTLYDIGVYCINTVRNLFGAEPMEVMAFSANSGDRRF
                     LQCEETTSAILRFPGKERLAAFSCSFGATDVSMYRVVGSQGELVMDPAYEYAGELKQR
                     ITIDGRKRERTFAKRDQFAPELIHFSECVLTGATPEPSGEEGLADVRVIRALYRSADT
                     GQPVALEPFDKHDRASLDQEIRRPPVRKPDLVNTEAPSE"
     gene            1261..2016
                     /locus_tag="VFD73_15125"
     CDS             1261..2016
                     /locus_tag="VFD73_15125"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HZI75316.1"
                     /translation="MFPYRDDNPTLATPIVTLLIIGANVLAWVVVQGMGAEPLLSRSV
                     CELGLIPGEFLGRLPEGYTLPMSRTTVCVITGEPSWFTPLTSMFLHGGWFHLIGNMWF
                     LWVFGNNVEDSMGRLRYLFFYLICGVAAAATQTWVNPTSAVPMVGASGAISGVMGAYV
                     VLYPRVRVHVLVILVIFITRIVVPAYLMLGYWFFLQVIGGGLASGEGGVAFWAHAGGF
                     VAGAVLISIFRDPELVAQHRALARTTGVVYQGR"
     gene            2036..>2393
                     /locus_tag="VFD73_15130"
     CDS             2036..>2393
                     /locus_tag="VFD73_15130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75317.1"
                     /translation="MSGTPPARSVVASDAAAFTLPVLPRNPGLPLDLEWIEQVRVNRS
                     AVERRTTALRGRRTVKKEWQAAWLLRAVTLLDLTTLSGDDTPGRVQRLCAKARRPVRG
                     DLLEAMQAERLPIKVAA"
BASE COUNT          414 a          730 c          765 g          484 t
ORIGIN      
        1 gtggctcgtg ggctatgggc tctgtaccgg tgggtgcgga gctctgctga agatgagttc
       61 atgcccgtct ggtgcggtcc atagcccgta gcctttcgcc tcagagtacg tcatgcctcg
      121 caaggtctcc aaagaagcca agaaaatccg ctatgccgtc gtgggcctgg gccatattgc
      181 tcaggtcgcg gtgctgcctg cgttcgctca cgccgagaac tccgagctcg cggcgctggt
      241 ctcggatgat cccgagaagc gagccaagct gggccgcaag tataaggtca aggccttttc
      301 ctacgcggaa tacgacgatt gcctgcgcag cggaagggtc gatgcggtgt atatcgcgct
      361 tcccaatcac ctgcacaggg aatacagcga acgagccgcc agggccggtg tccatgtgct
      421 ctgtgagaag cccatggccg taaccgaaga agattgccgt tccatgatac gcaccgccca
      481 ggaacacaac gtgaagctca tggtggcgta ccggctgcac ttccaagagg caaacctcaa
      541 ggccatcgat atagtgcaga gtggccggct gggtgatccg cgactcttca actcggtctt
      601 cacgatgacg gtgaaagagg gcgatatccg gctcaacccg cgcgagctcg ggggagggac
      661 gctctacgat atcggcgtct attgcatcaa taccgtccgc aatctgtttg gggcggagcc
      721 catggaagtg atggcgttca gtgccaacag cggagaccgg cggtttcttc agtgcgagga
      781 gaccaccagc gccatccttc ggttccccgg gaaagagcgt ctggccgctt tcagctgcag
      841 ttttggggca accgatgtct ccatgtaccg ggtggtgggc agtcagggag agctggtgat
      901 ggaccctgcc tatgaatatg ccggtgagct caaacagcgg attaccatcg atgggcggaa
      961 acgggagcga acctttgcca agcgagacca gtttgcacct gagctgatcc acttttccga
     1021 gtgcgttctg acaggcgcca ccccggagcc gtcaggagaa gaggggctcg ccgacgtgcg
     1081 cgtcatccgg gcgctctacc gatccgccga caccggccaa ccggttgcgc tcgagccgtt
     1141 cgacaagcac gaccgtgctt ccctggatca ggagatcagg cggccgccgg tgcggaagcc
     1201 cgatctggtg aataccgaag ctccttccga ataagaagtt cggctcagct atattgagcc
     1261 atgttcccct accgcgacga taacccaaca cttgccacac cgatcgtcac gctcctcatc
     1321 attggggcga acgtgctggc gtgggtcgtg gtgcagggaa tgggtgcgga gcctttgctg
     1381 tcccgctcgg tgtgcgagct ggggctgatc cccggggaat ttctcggccg tttgcccgag
     1441 gggtacaccc tcccgatgtc ccgcaccacg gtatgtgtca tcaccggcga gcccagctgg
     1501 tttaccccac tgacctcgat gtttctgcac ggtggttggt tccacttgat cggcaacatg
     1561 tggttcctct gggttttcgg gaacaacgtg gaagattcga tgggccgcct ccgatatctc
     1621 ttcttctatc tgatctgtgg tgttgccgcg gctgccaccc agacctgggt gaacccgacc
     1681 agcgccgtgc ccatggttgg agcgtcggga gcgatcagcg gcgtgatggg tgcctacgtc
     1741 gtgctctatc ctcgcgtgcg ggttcacgtg ctggtcattc tcgtcatctt catcacccgc
     1801 atcgtagtgc ccgcctacct catgttgggc tactggttct ttctccaggt catcggtggt
     1861 ggactggcca gcggcgaagg cggtgtcgcg ttctgggccc atgccggtgg tttcgtggcc
     1921 ggcgccgtgc tcatctccat cttccgcgat cccgagctcg tggcccagca ccgtgccttg
     1981 gcaagaacca cgggagtggt ctaccagggc cgctgatcgg cggtagcttt ccagaatgtc
     2041 tggcacccct ccggcgcgca gcgtcgtcgc ctcggacgcc gcggcgttta ccctgcccgt
     2101 gcttccgcgg aatcctggac taccgctcga cctcgagtgg atcgagcagg tccgggtcaa
     2161 tcgcagcgca gtcgagcggc ggacaacggc cctgcgtggc cggcgcacgg tcaagaagga
     2221 gtggcaggcg gcctggctcc ttcgggccgt taccctgctc gatctcacga ccctttcggg
     2281 cgacgacacg ccgggacggg tgcagcggct gtgcgcgaag gcgcggcgcc ccgtccgggg
     2341 cgatctgctc gaggcaatgc aggcggagcg gcttccgatc aaggtcgctg cag
//
LOCUS       DASRPQ010001309         1621 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1088061, whole genome shotgun sequence.
ACCESSION   DASRPQ010001309 DASRPQ010000000
VERSION     DASRPQ010001309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1621
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1088061"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..716
                     /locus_tag="VFD73_15135"
     CDS             <1..716
                     /locus_tag="VFD73_15135"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI75318.1"
                     /translation="LKVKYQRSLLGFVWTLLNPLLTVGSLVVVSSHVVRISLPDYWAF
                     VLSGYFVWNCILQTLNTGTYIFAEHSRLTRSVSFPSEILVFSAAGSRLLEFLAEIVLI
                     LALLVAFRHHHIPASFALLPVLLVIQVLLVIGLALPIATLSVFYYDVQHALPIALTTL
                     FYLSPVFYPAQMVPEAARSIYFLNPIAGLLTLYHETLYAGHMPSPTLLVGMLAGAFLV
                     YLLGYGIFSRYASVFPEIA"
     gene            670..1488
                     /locus_tag="VFD73_15140"
     CDS             670..1488
                     /locus_tag="VFD73_15140"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI75319.1"
                     /translation="MAFSLATPAFSPKSPDRARAAAVELRGVSKRFYYYEHRTSSLRE
                     WFIRRVLQRPLNIRRAEFTLRNLNLRVARGESVALIGSNGSGKSTALRLIAGIYQASS
                     GTIKTQGRLTAVIELGAGFHPELTGADNVSLYAAVLGIGRRELSTRYEEIVDFAQTRE
                     FMDTPLKYYSSGMEARLAFAVAVCLQPDVLLLDEVLAVGDQLFRERCLSRLREYHASG
                     GTLILVSHEIDQVRELCSRAVWLEHGVIRMDGEVGAVLTAYSANDPSQNHRGAR"
BASE COUNT          261 a          504 c          482 g          374 t
ORIGIN      
        1 atctcaaggt caagtaccag cgatcgttgc tgggatttgt ctggacgctg ttaaatccgc
       61 ttctcaccgt gggaagcctg gtcgtggtct ccagccacgt cgtccggatt tcgttgccgg
      121 attactgggc cttcgtcctg agcggctact tcgtctggaa ctgcatactc caaacgctga
      181 ataccggtac ctacatcttc gcggagcact ctcggctgac ccggagtgtt tcgttcccga
      241 gcgaaatttt ggtgtttagt gccgccggct cgcgcctgct cgagttcttg gccgagatcg
      301 tgcttatcct ggctctgttg gttgcgttcc ggcaccatca catcccggcg agctttgcgc
      361 tgctcccagt gctgctggtc attcaggtgt tgttagtgat cggcttggcc ctcccgatcg
      421 ccacgttgtc ggtgttctac tatgacgtgc agcatgcgct gcccatcgcg ctgaccacgc
      481 tcttttacct gtccccggtt ttttacccgg cccagatggt cccggaggct gcccggtcga
      541 tctatttcct caaccccatc gccggcctgc tcactctgta ccacgaaacg ctctacgcgg
      601 gccacatgcc gtcgcccacg ctgctggtcg gaatgctcgc gggcgctttc ctggtgtacc
      661 tcctcggtta tggcattttc tctcgctacg ccagcgtttt ccccgaaatc gcctgaccgc
      721 gcccgcgcgg cagccgtcga gcttcgggga gtctcgaagc ggttctacta ttacgagcac
      781 cgcaccagta gcctgcgcga gtggttcatc cgccgagtcc ttcagcggcc gctcaatatt
      841 cgtcgagcgg agttcactct tcggaacttg aatctgcggg tcgcccgcgg agaatcagtt
      901 gccttgatcg gctccaatgg ctccggcaag agcactgcgc ttcggctcat cgcggggatt
      961 tatcaggcat ccagcggaac gatcaagaca cagggccggc tgacagcagt catcgagttg
     1021 ggggctggtt tccatcccga gctcaccggc gcggacaacg tgtcgctcta cgcggcagtg
     1081 ctgggcatcg ggcgaagaga gttgtccacc cggtacgaag agatcgtgga cttcgcgcaa
     1141 acccgggagt tcatggacac cccgctcaag tactactcgt ctggtatgga agcccggctg
     1201 gctttcgccg ttgccgtgtg cctgcagccc gacgttctgc tgctggacga ggtgctggcg
     1261 gtgggagatc agctcttccg cgagcgctgc ctgtcccgtc tgcgtgagta tcacgcgagc
     1321 ggcggcactt tgattctcgt ttcccacgag atcgaccagg tgcgcgagct ctgctccagg
     1381 gcggtctggc tggagcatgg agtgatacgg atggacggcg aggttggcgc cgtgctcact
     1441 gcctattctg ccaacgaccc atcccagaac catcgaggag ccaggtgacc gccaccatgt
     1501 cgcagccgct ggtctcggtt gtgcttccct gcctcaacga ggaagcggca atcgggagct
     1561 gcattcagaa gattcaggcc acgtttgagc aagccaggat cgacggggaa atcgtggtgt
     1621 g
//
LOCUS       DASRPQ010001310         1197 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3310149, whole genome shotgun sequence.
ACCESSION   DASRPQ010001310 DASRPQ010000000
VERSION     DASRPQ010001310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1197
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3310149"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(716..949)
                     /locus_tag="VFD73_15145"
     CDS             complement(716..949)
                     /locus_tag="VFD73_15145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75320.1"
                     /translation="MKRLLAVVMVVSAALLSAPVASADPGGGNYVCDYRGYCGNGGGG
                     WDNGYNQGWYPGKLLSGGSGCVSGPFGFVQFCR"
BASE COUNT          236 a          359 c          387 g          215 t
ORIGIN      
        1 aagctgccga gcgcgaatgg ccgagtcctc actgcggccg ccgaagaagc gagcgaaagc
       61 ggggtcgtca tgcaggatgg cgaacagatc atcgatgacc gcagcgatca cgtcgtagcc
      121 gcccatacgc tgatacagag acctggcgga ctgtgtcatg attttccctc cctcgccggc
      181 acacttcgat gagcataagc cgccgtgcgg ctcgggagcg ggtaggccgc tgccgtcgat
      241 aatggcggat gcgctgctgg atgagcgccg ggaactgtcc gagtgggctg cacaccgctg
      301 cggggatgtg cacattcgcg attgagtgac cgtggggttg gttactctcc catcggcgct
      361 tcgggacacg tcaccaacaa gaacatcacc ttacgggggt tggaagcatg gtgtcccgcg
      421 cggctctgat cgcggtagcc atcgctaggc agcctcgtgg tgggcatggt aggagaaacc
      481 gtgatgtggg tcgatctcct cgaagggctg ggatggctgt ccctggcttg cggcggtgtt
      541 acggcactga tggcagtaac gctcagatga cggtcaagcg atggtcgtgc gggcagcttc
      601 tgaccaccgg ctgaccaatg gaggccccga gaggcaccgt gcgacgctcc gctgagggcg
      661 cgccgtagtg gccacggctg cacatactta ttaagcagtg tggttgcccc gacgtctacc
      721 tgcaaaactg gacgaaaccg aacgggccac tgacacagcc ggaaccgccg gatagcaact
      781 tgcccgggta ccagccctgg ttatagccgt tgtcccagcc gcccccaccg ttgccgcaat
      841 agccccgata gtcgcagacg tagttacccc cgccgggatc ggccgaagcg actggggcgc
      901 tcaacagcgc cgcgctcacg accatcacaa cagccagaag tcttttcatt cacgcgctcc
      961 agcaattcac cttcctacag gctacttctc ccaccggtcg ggtcaaagcg tttgggttgc
     1021 acctggagcc aacgatgatg ggcggcagat tgcatggata cgcacatcga atggaggttg
     1081 gctggcggcc gatgagttgc ccgcgacgag cggcaacgga cggtcccggc tgactatgaa
     1141 tctgtggttg ccggcagagg tcgtacgacc cgaccaatag cgctggcgaa gcgattg
//
LOCUS       DASRPQ010001311         3547 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2685803, whole genome shotgun sequence.
ACCESSION   DASRPQ010001311 DASRPQ010000000
VERSION     DASRPQ010001311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3547
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2685803"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..813)
                     /locus_tag="VFD73_15150"
     CDS             complement(<1..813)
                     /locus_tag="VFD73_15150"
                     /inference="COORDINATES: protein motif:HMM:TIGR02226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatA domain-containing protein"
                     /protein_id="HZI75321.1"
                     /translation="MGFLHPWVLVGMAAAAVPLILHLLARREPPTVMFPAVRYLVTTT
                     REHQRRLKLQNWLLLLLRTLLIALLVLAAAAPTMPLTGVPGHVPTALVVIVDNSPSSG
                     AVTGGAPLLRQILAAARRVVNRATPDDALWLITADGIPRRTDRGTLADLLGTLKISSR
                     RLDLGAAITTAGQVLAPEPLPGEIVLLSDLQATALSSSQATAPVIVGRPTASPPANAG
                     IGVLDPGSQPWSSEGGKITLELVGDSGSTVPVSARLDRRASRQTLGHIGSPTT"
     gene            complement(813..1745)
                     /locus_tag="VFD73_15155"
     CDS             complement(813..1745)
                     /locus_tag="VFD73_15155"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HZI75322.1"
                     /translation="MYRSDPPLPQSRSRLDLLDPIEVSKLGGLEIITEGVVEGFLSGL
                     HRSPRRGFSVEFAEHRMYQPGDELRYVDWKILGRNDRLYVKQFEEETNLRAMVVCDAS
                     RSMAWSGSPGVVLPKLDYARVLIAALSLVLIRQRDATGLITFDDDVRTITPPRARLSH
                     WRQLLQVLGALEPGQGTAAEPALRRVVAQLRRRGLVVFVSDLLLDRALALKALRFLRH
                     RGHQVVVLHVMDPGEVNLGGPNEARFEDPETHSTVVLRPRDWAGAYGETVRRVITEWR
                     LACLRHGIAYHRVTTDTPFGIVLREALSPGSSNR"
     gene            1869..3374
                     /locus_tag="VFD73_15160"
     CDS             1869..3374
                     /locus_tag="VFD73_15160"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HZI75323.1"
                     /translation="MPRPALLFAIVLLPLPLAAQTSRATEHAAASITPSEVARRIGII
                     ADDSMLGRDTPSRGLELTAAYVASQFRSFGLQPGGDSGSYLQRYSISRRRLDLGRSEV
                     VFARGATVARALFTSNARLLLGQVPQHPVAGPAVLLQGAVQSPSAESLDVRDRILLLA
                     FNVGELQEPGVQQALGVLYSKRPKAILLLTDRDSATFAGKIPQHSSPRLVVGDVSGPV
                     VLEIRRAPVSRVLRAAGIDPSLAHSAEPASLREVPRLQVRLNMRDTVLSNVSVPNTVG
                     ILKGTDSVLKHEYLVYSAHMDHIGITPGQPDSINNGADDDASGTTGVMELAQAFSRAG
                     ARPKRSIIFLTVSGEEKGLWGSEYFSSHPPVPIHQIVADINIDMIGRNWPDTIVAIGK
                     EHSDLGATLNRVNAAHPELGMTAIDDRWPEERFYFRSDHYNFARRGVPILFFFNGVHP
                     DYHEVTDSPDKINSEKESRILKLLFYLGEQIADAPQRPQWNPESYKEIVEQ"
BASE COUNT          692 a         1128 c         1113 g          614 t
ORIGIN      
        1 cgttgttggt gatccgatgt gaccgagcgt ctggcgcgat gcgcggcgat ccagccgcgc
       61 gctcaccggg accgtggatc cggagtcgcc aacgagttcg agagtgatct ttcctccctc
      121 cgaggaccac ggctgggatc ctgggtccag cacaccaatg ccggcattcg ccgggggtga
      181 ggcggtgggg cgtcccacga tcacaggtgc cgtggcttgg gaggaggaaa gcgcggttgc
      241 ctgcagatcg ctgagcagca cgatctctcc gggaagcggc tcaggagcca agacctgacc
      301 ggcggtggtg atggccgcgc cgaggtcgag ccgtcgactg gagatcttca acgttcccag
      361 caggtccgcc agcgtcccgc gatcggttcg gcggggaatc ccgtcggccg tgatcagcca
      421 gagcgcatca tccggcgtcg ctcggtttac caccctccgt gcggcagcga gaatttgccg
      481 gagcagcgga gcgcctccgg tcactgcacc gctgctcggt gagttgtcga cgataacgac
      541 gagcgccgtc ggcacgtggc cgggcactcc ggtcagtggc atcgtgggag ccgctgcggc
      601 aagcacgagg agcgcgatca gcagagtacg gagcagcagg agcaaccagt tctgcagctt
      661 cagtcggcgc tggtgctcgc gcgtggtggt caccaggtag cggactgccg gaaacatgac
      721 ggtcggcggt tcgcgccgcg ccagaagatg aaggatcagc gggacggccg cggcagccat
      781 tccgacgagg acccacggat gcaggaatcc catcaacgat tactggagcc cggagacaga
      841 gcctcccgaa gcacgatccc gaacggagtg tcggtggtca cccggtgata ggcgatgccg
      901 tgccggagac acgccaatcg ccactcggtg atcacccggc gaaccgtttc gccgtacgcg
      961 ccggcccaat cccggggccg cagcactacg gttgaatggg tttccggatc ttcgaaccgg
     1021 gcttcgttgg gaccacccag gttgacctca ccgggatcca tgacgtggag caccaccacc
     1081 tgatggcccc gatgccgcag aaaacggagc gccttgagcg ccaacgctcg gtccagcaga
     1141 agatcggaga cgaagacgac gagaccacgg cgacggagct gggctaccac cctccggaga
     1201 gcgggctccg cggcagttcc ttgccccggc tctagtgcgc ccagcacctg cagcaactgg
     1261 cgccaatgac tcaagcgagc tctgggcgga gtaatagtgc gaacatcatc atcgaaggtg
     1321 atcaagccgg tcgcatcccg ctgccggatc aacaccagcg acagcgcggc gatgagtacg
     1381 cgggcgtaat caagtttcgg aagcaccacg ccgggcgaac cggaccaggc catcgagcgg
     1441 ctggcatcgc acaccaccat ggcccggaga ttggtttcct cttcgaactg cttgacgtag
     1501 aggcggtcgt tgcggcccag aatcttccag tcgacatagc ggagctcatc accgggctgg
     1561 tacatccggt gctccgcaaa ttccacggaa aaccctcgcc ggggtgaccg atgcaatccg
     1621 ctcagaaatc cttcgacaac accttcggta atgatttcca gtccacccag cttcgacacc
     1681 tctatcggat cgagcaggtc aaggcgggaa cgactctggg gcaggggcgg gtcggaacga
     1741 tacattcaat gggcaacgta tccgggcgta accgatgaag tcaaacgctg aagccgtccc
     1801 gggtgaaaca gcatcggttc cctacccgta ccgtggatat cccgagctcc tcaaacagga
     1861 ttctcttcat gcctcggccg gcgcttctgt ttgccattgt gcttctgcca cttcccttgg
     1921 ctgcccagac cagcagagcg acagagcatg cggcggcgtc tatcaccccg agcgaggttg
     1981 cccggcggat cgggatcatc gccgatgatt ccatgctggg tcgggatacc ccgagccgag
     2041 gtctcgagtt gacggcggcc tacgtggcga gccagttccg gagctttgga ctccaaccag
     2101 gcggcgattc aggttcctat ctgcagcgct attcgatcag ccggcgccgg ctggacctcg
     2161 gccggtcgga agtcgtcttt gcccggggcg ccaccgtggc acgagcattg tttaccagca
     2221 acgcccgcct tctcctcggc caggttccgc aacacccggt cgctgggccg gccgtgctgc
     2281 tgcagggggc cgtccagtcg ccgtcagctg agtcactcga cgtcagggac cgcatccttc
     2341 tgcttgcctt caatgtcggt gagctccagg agccgggggt gcagcaggcg ctcggagtgc
     2401 tctacagcaa gaggccgaag gcgatcctgc tgttgaccga cagggactcc gccacgttcg
     2461 ccgggaagat tcctcagcat tcctcgccac gtctggtcgt gggtgacgtg tctggacctg
     2521 tggtgctgga aatccggagg gcgcccgtct cgcgcgtcct gcgggctgct ggaatcgatc
     2581 cgtctctggc gcactccgcc gaaccggcgt cgctgcggga agtgccccga cttcaggtac
     2641 gactcaacat gcgggacacg gttctatcaa atgtctcggt acccaatacc gtgggaatcc
     2701 tgaagggaac cgattccgtc ctgaaacacg agtatctggt gtattccgcg cacatggatc
     2761 acatcggaat cacgccggga cagcctgata gcatcaacaa cggcgccgac gacgacgcct
     2821 ccggtaccac cggcgtgatg gagctggccc aggcattcag tcgagcagga gcccggccca
     2881 agcgctccat catttttctc acggtcagtg gggaggagaa gggcctctgg gggagcgagt
     2941 acttcagctc acacccgccg gtgcccatcc accagatcgt cgcggacatc aacatcgaca
     3001 tgatcggccg caactggccc gacaccatcg tggcgatcgg aaaggaacat tccgatcttg
     3061 gcgctacgct caaccgggtg aacgccgcgc atccggagct cgggatgacg gccatcgacg
     3121 accgttggcc ggaagagcgg ttttacttcc gctccgatca ctacaacttt gcccgccgcg
     3181 gtgtgccgat tctctttttc ttcaatgggg ttcacccgga ctaccatgag gtgaccgatt
     3241 caccggacaa gatcaacagc gagaaagaat cccgcattct gaagctgctc ttctatctgg
     3301 gcgagcagat cgcagacgcg ccgcagcgtc cgcaatggaa tccggagagt tacaaggaga
     3361 tcgtcgagca gtaaggaagt acctgctgtc aggcgttgcc accccgagca ttcgtcctct
     3421 gcgctctggt gagcagcacg cctgccacga tcaatgccgc accaaccgcc tgcagtggat
     3481 ggggctgctc tcccaggagg agccacgctc cgcaaacagc gaccagcgga gtgacgcaca
     3541 tataaat
//
LOCUS       DASRPQ010001312         1127 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1735290, whole genome shotgun sequence.
ACCESSION   DASRPQ010001312 DASRPQ010000000
VERSION     DASRPQ010001312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1127
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1735290"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            63..419
                     /locus_tag="VFD73_15165"
     CDS             63..419
                     /locus_tag="VFD73_15165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75324.1"
                     /translation="MRAGRGFLIGVGLLGWSAAAALALWLVSRTGFLGIALIGVAIWF
                     ICVRVELEKEGAVGHELTPTLFAEQIKARQQMSRSERAALIAEQTAVTLWARFIRQFG
                     IALAGIGLGGFVLYQL"
     gene            416..>1127
                     /locus_tag="VFD73_15170"
     CDS             416..>1127
                     /locus_tag="VFD73_15170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75325.1"
                     /translation="MKPDPTPIQAWLIVAGLAGKPLPQLFDGFCNRLVAAGVPLARGY
                     VSTATLHPLLWATGIVWQQGRIIDSVDINYGFETWTAWLTSPFRHMLESRTWKLHRRL
                     TGEGALLDYPVLLEFRETGMSEWLGLFYGFGWGLRHHQVEELGVIFSWTTDHPDGWTV
                     AELSLLEELSAALALAVKASTGFGTTRDLLATYLGGDAADRVISGQVQRGSVTRIKAF
                     ILYADLRGFTDFAESTAPD"
BASE COUNT          184 a          333 c          361 g          249 t
ORIGIN      
        1 caagctgtcg ttagctcttt aaacttccga agtccgggtg aaactcgtcc tctgaaagcg
       61 ttatgcgcgc tggtcgaggt tttctgatcg gggttggatt gctgggttgg tccgcggcgg
      121 cggcgcttgc cttatggctc gtctcgcgga ccgggtttct cgggatcgct ctgatcggcg
      181 tggcgatctg gttcatctgc gtccgggtgg agttggagaa ggaaggagcg gtcggccacg
      241 agctcacgcc cacgctattt gctgaacaga tcaaggctcg ccagcagatg tcccgctcgg
      301 agcgcgcggc actcattgcc gagcaaacgg ctgtcacact gtgggctcgg ttcatcagac
      361 agtttggaat tgccttggct ggtatagggc tgggcggctt cgtgctctac cagctttgaa
      421 gccggatccg acccccatcc aggcatggct gatcgtagcc ggacttgccg gcaagccgct
      481 gccgcaactc ttcgacgggt tctgcaatcg cctggtcgcg gccggtgtgc cgctcgcccg
      541 aggttatgtc tccaccgcca cattgcaccc cctgctttgg gccacaggca tcgtctggca
      601 acaggggcga atcatcgatt cagtcgacat caactacggc ttcgagacct ggactgcttg
      661 gctcacgagc ccattccggc acatgctgga atcgcggaca tggaagcttc atcgcaggct
      721 gacgggagag ggagcactgc tcgattatcc ggtgcttctg gaatttcgcg aaaccggaat
      781 gtccgaatgg ctcggcctgt tctacggctt cggctggggc ttgcggcatc atcaagtcga
      841 ggagttgggg gtcatcttct cgtggacgac cgatcacccc gacggctgga cggtggctga
      901 gctgtcgttg ctggaggagt tgtcggctgc gctggctctc gcggtcaagg ccagcaccgg
      961 tttcggcacg acacgcgatc tcctcgccac gtatctgggc ggggacgcgg cggaccgtgt
     1021 gatatcaggc caggtgcaac gcggctctgt cacccgcatc aaggcgttca tcctctacgc
     1081 cgatctgcgc ggtttcaccg attttgccga gagcaccgca cctgacg
//
LOCUS       DASRPQ010001313         1234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2050869, whole genome shotgun sequence.
ACCESSION   DASRPQ010001313 DASRPQ010000000
VERSION     DASRPQ010001313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1234
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2050869"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(62..1225)
                     /locus_tag="VFD73_15175"
     CDS             complement(62..1225)
                     /locus_tag="VFD73_15175"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZI75326.1"
                     /translation="MAERGYSRDGKRNSLQVSFGLTCDKEGRPLAVKVDVGSLSDPET
                     VAEELDLLRRRFGLKEVILVGDRGLLTKARIEDLRKLPQVGWITALRAPAIHKLVAEG
                     SLQLSLFDLQNLAEISSPDYPDERLIVCYNPAVAEDRARTRTELLAATEKELAKVSRM
                     VEAGRLVGEDKIGLRAGKVCNRFKMAKHFELEIARGSFKYRRKQQSIEREAALDGLYA
                     IRTSLPAEQMEATQVVRSYKKLARVERDFRVLKGPDLEVAPIRHRLAERISAHFLICQ
                     LAAYVRWHMERELAPLLFKDESPPTPEDPVAPARRSASAEHKARRKRNDDGLPVRSFR
                     SLLDELATLTKNLVAPLGAGDTRFWQLSQPTPLQERDFQLLGIKLRVAKTPAA"
BASE COUNT          196 a          390 c          413 g          235 t
ORIGIN      
        1 ccgaagttac ccctgagatg ttgaactcgg agagggcgtt atcgagttca gctccgggcc
       61 gttaggcggc gggcgttttg gctacgcgga gcttgatgcc caagagctgg aagtcgcgtt
      121 cttggagcgg ggttggctga ctcagctgcc agaagcgagt gtcgccggcg ccgagcggtg
      181 cgaccaggtt cttggttagg gtggccagct catccagcaa cgagcggaag cttctgaccg
      241 gcaggccgtc gtcgttgcgc ttgcggcggg ctttgtgctc ggcagaggca gagcgccggg
      301 ccggtgccac cgggtcttct ggggtgggcg gggattcatc cttgaagagc aagggcgcca
      361 gctcacgctc catgtgccag cgcacatagg cggccagctg gcagatcagg aagtgggcgc
      421 tgatgcgttc ggcaaggcgg tggcggatgg gagccacctc taggtccgga cctttgagga
      481 cccgaaagtc gcgctccacc cgggctagct ttttatagga gcgcaccacc tgggtggcct
      541 ccatctgttc tgccgggagc gaggtgcgga tggcgtagag cccgtccagg gcggcctccc
      601 tttcgatcga ctgctgcttg cgccggtact tgaagctgcc cctggcgatc tccagctcga
      661 agtgcttggc catcttgaag cggttgcaga ccttgcccgc cctaagcccg atcttgtcct
      721 cgcccaccag acgcccggct tccaccatcc gggacacctt ggccagctcc ttttcagtcg
      781 ccgccaagag ctcagtgcgt gtgcgcgccc gatcctcggc cacggccggg ttgtagcaga
      841 cgatgaggcg ctcgtccggg tagtcgggcg agctgatctc ggccaggttc tggaggtcga
      901 acagggagag ctgcaggctg ccttcggcca ccagcttgtg gatggccggc gcccgcaggg
      961 ccgtgatcca gcccacctgg ggcagcttgc gcagatcctc gatccgggcc ttggtcaaaa
     1021 gaccccggtc gccgaccaga atcacctctt tgagcccgaa gcgacggcgc agcagatcga
     1081 gctcctcggc caccgtctca gggtcgctga gcgaacccac atcgaccttg accgccagcg
     1141 gccgtccttc tttgtcgcag gtcagcccga agctgacctg gagcgaattg cgctttccgt
     1201 ctcggctata accacgttcg gccagctcac agtg
//
LOCUS       DASRPQ010001314         2377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1088344, whole genome shotgun sequence.
ACCESSION   DASRPQ010001314 DASRPQ010000000
VERSION     DASRPQ010001314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2377
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1088344"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            87..1445
                     /locus_tag="VFD73_15180"
     CDS             87..1445
                     /locus_tag="VFD73_15180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75327.1"
                     /translation="MTLAVRRIPAMLSWRLVRQASRRLSWGVADQAMSSVSNFAVNIY
                     IARTLGAVQYGAFALAYVTYGFAVNASRGLGTDPLLVRFSGTYHPTWRRAVARCTGTA
                     TIVGLVLGACTLVASTLLSGTTSLAFLALGLTLPGLLLQDSWRFAFFAHGRGSQAFLN
                     DTIWTVTLLPALVLLRQTGHADVFWFVFAWGAAAAVAAAFGPLQARVLPKFTGTWEWV
                     SRHWDLGPRYLAEGTLNSSQNQLRNYGISLILGLAALGYVQAASTLMGPFMVIFFGMG
                     LVLLPEAARILRKSPRHLPLFCACASGGLALLGLAWGVVLLVTLPIGLGQFMLGSLWH
                     QTYPLVLPSTIAIMGGCVQAGAGTGLHALGSARRSLRAMVLASALFVVCGLVGAAVGG
                     AFGTMCGAAVASWIGALLFWLQLRHALREPAKVSVEPRSGAAVSTDRTASPLQKASPD
                     GS"
     gene            complement(1440..2324)
                     /locus_tag="VFD73_15185"
     CDS             complement(1440..2324)
                     /locus_tag="VFD73_15185"
                     /inference="COORDINATES: protein motif:HMM:NF013806.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75328.1"
                     /translation="MRQLKRRAEKLHLPPSSPTKRRNVIAATVAAASLGIYSLSGCHH
                     ASPYAGSSARAIRSNPSITGNPCTKPTAIPMDPGKAQSGITKGKYFITNDSWNAGHYS
                     GLSQTLHVCNYNSWYAIATMNNDTGDGAVKTSPNVQETWYPTPTKLSRWKSITSQFSD
                     VPPGTGPDYGIWDFEYDIWLNGLADSNSTEVMIWTYNNGQSPGGSPSGSFADAGHTYD
                     VYHSSPPNQYVAFVDRSDNLSGNVNLLDFLNYVISRGWMPSSSTLYQICNGVELVSTK
                     SKPEKFTVNNFSINMNSL"
BASE COUNT          387 a          702 c          780 g          508 t
ORIGIN      
        1 ggatccgtga gctgctctcc gccggtatag tcgacgaaat gctacgtcgg cagacctccg
       61 tgcatctccc gtaagagggc tggttaatga ccctagcggt caggagaatt ccggcgatgt
      121 tgtcctggcg cctggtgcgc caggcgagcc gccgccttag ctggggcgtc gcggaccagg
      181 cgatgtccag cgtcagcaac ttcgcggtga acatctatat cgcccgtacg ctgggcgccg
      241 tgcagtacgg ggccttcgcc ctggcttacg tcacctacgg gttcgcggtc aacgcatcgc
      301 gagggctcgg caccgaccct ctgctggtca ggttcagcgg cacgtaccac cccacctggc
      361 ggcgggccgt cgccaggtgt accgggacgg ccaccatcgt gggccttgtg ctcggcgcct
      421 gtacgcttgt ggcgtccacg ctgctcagcg gcacgacaag cctggccttc cttgcgctcg
      481 ggctgacact gcccgggctg ctgctgcagg acagctggcg gtttgcgttc ttcgcgcatg
      541 gacgcggcag ccaggcattc ctcaacgaca ccatctggac agtaacgctg cttcctgccc
      601 tagtgctctt gcgccagact ggccatgcgg acgtattctg gttcgtcttc gcgtggggtg
      661 ccgcagccgc cgtcgcggcc gcgttcggcc cgttgcaggc ccgggtcctg ccgaagttca
      721 cgggcacgtg ggagtgggtg tcacggcact gggacctcgg gccccgctac ctcgccgaag
      781 gcaccctcaa cagcagccag aaccaattgc gtaactacgg catcagcctc atcctgggcc
      841 tggcggccct tggctacgtg caggcggcca gtacgctgat gggtcccttc atggtcatct
      901 tctttggtat gggactggtc ctgttgccgg aggccgcccg gatcctgcgt aaatcgccac
      961 ggcatctgcc gctgttttgc gcgtgcgcga gcggtggact cgctctgctc gggctggcgt
     1021 ggggggtcgt gctgctggtg acgctgccga tcggactcgg gcagtttatg ctgggctcgc
     1081 tgtggcatca gacctacccg ctggtattgc cgagcacgat cgccattatg ggtggatgcg
     1141 tccaggccgg cgctgggacg ggactgcacg ctctgggatc cgcgcggcgg agcctgcgcg
     1201 cgatggtcct cgcttccgcg ctctttgtcg tctgtggcct ggtgggagcc gctgtcggcg
     1261 gagcattcgg gacgatgtgc ggcgcggcgg tcgcatcatg gatcggcgcg ctgctgttct
     1321 ggttgcagct gcgccatgcg ctacgggaac ccgctaaggt ctcggtcgag ccgcgctcgg
     1381 gagcggccgt cagcacggac cgcaccgcaa gcccgcttca gaaggcctca cctgacggct
     1441 cataagctgt tcatgttaat ggaaaagtta ttgacggtga acttctcagg tttacttttc
     1501 gttgacacga gctcgacgcc gttgcagatc tggtacagcg tcgatgagct cggcatccag
     1561 cccctcgaaa tcacgtagtt gaggaaatcg agcaggttga cattgcccga caggttgtca
     1621 ctccggtcga caaaagcaac gtattggttc ggtggcgatg aatgatacac gtcataggta
     1681 tggcccgcgt cagcaaacga tccgcttggt gaaccgcccg gagactggcc gttattgtag
     1741 gtccagatca tgacctcagt cgagttgctg tcggcgaggc cgttgagcca gatgtcatac
     1801 tcaaagtccc agataccgta gtccgggccc gtgcccggcg gtacgtcaga gaactggctg
     1861 gtgatggatt tccatctgct cagcttggta ggggtgggat accaggtttc ctgaacattc
     1921 ggcgatgttt tgacggcgcc gtcgccggta tcattgttca tggtggcgat cgcgtaccag
     1981 ctgttgtagt tgcagacgtg aagagtctgc gacaagccgc tgtagtggcc cgcattccag
     2041 ctatcattgg tgatgaaata tttccccttg gtgatgccgc tctgagcctt gccgggatcc
     2101 atcgggatag ccgtcggttt ggtacaaggg ttgccggtga ttgacgggtt agaccgaatg
     2161 gcccgggcac tggagccggc gtagggcgat gcgtggtgac agccggacag ggaatatatg
     2221 cctaggctgg cggcggctac cgtggccgca ataacgtttc gacgcttggt cgggcttgaa
     2281 ggcggcaggt gcaatttctc ggctcggcgc ttcagttgcc tcatgagtaa acccctaggt
     2341 aagctaatac gacagacccg gagaagttca cgatcaa
//
LOCUS       DASRPQ010001315         1616 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1415149, whole genome shotgun sequence.
ACCESSION   DASRPQ010001315 DASRPQ010000000
VERSION     DASRPQ010001315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1415149"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..926
                     /locus_tag="VFD73_15190"
     CDS             <1..926
                     /locus_tag="VFD73_15190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75329.1"
                     /translation="EIRTAVGAGAELVLSINGSNLEVARDLGRDAMVVVIPDFGQGMD
                     TLERNVEALERWNVRYLIDPVIEPIGFGFMASLERYAEVHRRYPTAAQMMGIGNITEL
                     TSADTTGVNALLLAICEEVGVRAVLTTEVISWARGSVREIDIGRRLMHYAIHHQAVPK
                     AVDDRLITVKDPVILEYSESELRQLQAAVRDPNFRIFTDRETITVFNREQFVRGTDIQ
                     IIFNQLGIDEPTHAFYLGRELMKAKLAITLGKTYRQEGALSWGYLTPPDDVKSEHVRL
                     TQRSRRSRTSEAGKRGSGTCPEAGGEGAAGG"
     gene            1037..>1616
                     /locus_tag="VFD73_15195"
     CDS             1037..>1616
                     /locus_tag="VFD73_15195"
                     /inference="COORDINATES: protein motif:HMM:NF016593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75330.1"
                     /translation="MHSAPGARFATEPHPGQADLQRYSFLSADPVSLVQSKGGTTQVW
                     HRAESRWTAHSGDGLAAGRALLPAEPLRAVPGLPPFQGGLAGYIGYDWGAVLERLPQN
                     RYDDLVIPDLVLGLYDWVIAWDHRIGTGWLISTGLPGTGPARERQARSRLQLVRERLS
                     ASGNSRLRPAAQPRIAVGPLPPEIPPTYPVAGI"
BASE COUNT          315 a          488 c          529 g          284 t
ORIGIN      
        1 atgagattcg gaccgcggtg ggggccggag ccgaactcgt cctcagtatc aacgggagca
       61 atctggaagt cgcccgtgat ctcggccgcg acgcgatggt ggtcgtcatt cccgattttg
      121 ggcaaggaat ggataccctc gagcgcaacg tcgaggcgct ggagcggtgg aacgtccgct
      181 atctgatcga tccggttatc gagccgatcg gattcggctt catggcgtcg ctggagcgct
      241 acgctgaagt ccatcgccga tatcctaccg ccgcacagat gatgggcatc ggaaacatca
      301 ccgagctgac cagtgccgac acgaccggcg tgaacgcgct gctgcttgca atctgtgaag
      361 aggtgggagt gcgggcggtg ctgaccacgg aggtgatatc ctgggctcgg ggctcggttc
      421 gcgagatcga cattggccgg cggctgatgc actacgccat acatcatcag gcggtgccca
      481 aagcggtgga tgaccggctg attacggtca aggacccggt cattctggaa tacagcgaga
      541 gcgagttacg gcagcttcag gctgcggtgc gcgaccccaa cttccgcatc ttcaccgatc
      601 gagagacgat caccgtcttc aaccgcgaac aattcgtgcg gggcaccgac atccagatca
      661 tcttcaatca gttgggaatc gacgagccca cccacgcctt ctatctggga cgcgagctca
      721 tgaaggcgaa actggccatt actctgggga agacctaccg acaggagggc gctctgagct
      781 ggggctatct caccccgccc gatgatgtga aatcggagca tgtgagactg acccagcgct
      841 cgcgaagatc gcgaaccagc gaagccggaa agcggggcag cggaacctgc cctgaggcag
      901 gaggcgaagg ggcagcggga ggatgaatgc agggttcgaa tcactcatcg agcccctggg
      961 agaaacggac gacccggcgg aggtctgtgc tcggttcctg gatctccctt gtctgctatt
     1021 cctcgatagc gcggcaatgc actcagcgcc cggcgctcgg ttcgccaccg agccgcatcc
     1081 aggccaggca gacctgcagc gatattcttt tctgagcgcc gaccctgtct cgctggttca
     1141 gagcaaagga ggaacgaccc aggtctggca tcgagcggag tctcggtgga cagcgcattc
     1201 tggtgatggc cttgcagccg ggagggccct gttgccggcg gagccgctcc gcgcggtacc
     1261 cggcctccca ccatttcagg gggggctcgc gggatacatc ggctacgact ggggcgccgt
     1321 gctggaacga ctgcctcaaa accggtacga cgatctcgtc atccccgact tggtgctcgg
     1381 actctacgac tgggtcatcg cgtgggatca tcggatcggc acggggtggc tgatttccac
     1441 tggcttgccg ggaaccgggc cggcgcgaga gcgccaagcg cgttcgcgct tgcagctggt
     1501 acgggagaga ctgagcgcca gcggcaacag ccgactgcgt ccagctgccc agcccagaat
     1561 cgccgtaggt ccgctgccac cagagatccc tccgacctat ccggtcgcgg gaatcg
//
LOCUS       DASRPQ010001316         1086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1735642, whole genome shotgun sequence.
ACCESSION   DASRPQ010001316 DASRPQ010000000
VERSION     DASRPQ010001316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1735642"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..987)
                     /locus_tag="VFD73_15200"
     CDS             complement(<1..987)
                     /locus_tag="VFD73_15200"
                     /inference="COORDINATES: protein motif:HMM:NF022022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor N-terminal domain-containing
                     protein"
                     /protein_id="HZI75331.1"
                     /translation="MRLTPRQRAMLAEQTKSLPDRLPEDTFVIYTLTDPTSNAIHYVG
                     MTQQSPRMRLIQHLKQLTVRGMKREWLTRLMDDEQVPLMTIVEMVTGTQEDALERERH
                     WIGRLQGEGHPLLNAEVLPRRKRMTGPEREDRIEEQDRTVFIPAQQETINFLGRSLIA
                     VRLADGRIAASLHIMCDALQLDRPGQLRRIREDDVLADQLLAVRVETDGGLQVMKMLT
                     IWAIPTWITGLQIERTDTDKREAIRAFKREAADALYRHFSRRLALPAPQAVVPAEPPT
                     APPAPVAQPTSPPPGAALDEWQTWRQGMRAWLDWQDEMDRWRQDSAHRQDELA"
BASE COUNT          181 a          319 c          363 g          223 t
ORIGIN      
        1 cgccaattcg tcctggcgat gggcgctgtc ctggcgccag cggtccattt cgtcctgcca
       61 gtccagccag gcgcgcatgc cctgccgcca ggtttgccac tcgtcgagcg cggcgccggg
      121 tggcggagag gtgggctgag caaccggcgc gggcggggcg gtaggaggct cggcgggaac
      181 gacggcctgg ggcgcgggga gggcgaggcg gcgcgagaag tggcggtaga gcgcatcggc
      241 ggcctcgcgc ttgaaggcac ggatcgcttc gcgcttgtct gtatctgtcc gctcgatctg
      301 gaggccagta atccaggtcg ggatggccca gatagtcagc atcttcatta cctggaggcc
      361 accatccgtc tcgacgcgca ccgccaggag ttggtcagcc aagacgtcgt cctcacgaat
      421 gcgacgcaat tgtcctggac ggtcaagctg cagagcatca cacattatgt gcaacgaggc
      481 ggcaatacgt ccgtccgcga ggcgcacagc gatgagggaa cgcccaagga aattgatggt
      541 ctcctgttgg gctggaatga ataccgtacg gtcttgctct tcgatccgat cctctcgttc
      601 aggaccggtc atcctctttc gacggggcag aacctcggca ttcagcagtg gatgcccctc
      661 gccctgtagt cggccaatcc agtggcgttc ccgctccagc gcgtcctctt gggttccagt
      721 gaccatctcc acgatggtca tgagaggcac ctgctcatcg tccatgagcc gtgtgagcca
      781 ttcccgtttc atcccacgca cggtcagttg tttcagatgt tgaatgagcc gcattctggg
      841 gctttgttga gtcatcccga cgtagtggat ggcattggaa gtgggatcgg tgagggtgta
      901 gatgacgaac gtgtcttctg gtagcctgtc cggcagactc ttggtctgct ccgcaagcat
      961 ggcgcgctgt ctcggggtca gcctcattga cgtctccgtt gcttctgggg cgccggtgga
     1021 gcgtcaggtt gagggggata taggatgcgc cgcacgccgg acaaggccaa ccatccgcgc
     1081 cgcgtg
//
LOCUS       DASRPQ010001317         1863 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2051195, whole genome shotgun sequence.
ACCESSION   DASRPQ010001317 DASRPQ010000000
VERSION     DASRPQ010001317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1863
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2051195"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(30..1715)
                     /locus_tag="VFD73_15205"
     CDS             complement(30..1715)
                     /locus_tag="VFD73_15205"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZI75332.1"
                     /translation="MYLRTTRQRRKHGPDAIYYQLAENYYHKERRRSETRVIHTLGRA
                     DQVDPEALRRLAQSILRVANDERIDLPARTFPPEVGIDDIEQVFDYGVLYAAHTLWEE
                     LGIGPLLREKMQQEGGEAPHDTALFAMTANRLARPTSKLACYEHWLADEVYWPEAKVL
                     ALEHLYRALDFLLRHIEALEQEIFFRTADLLNADVDLIFWDTTTLYCEIDDEDDDGEV
                     WEDQEIPALRKRGHNKEGRDGNPQVVVGLALTRDGLPVRSWVFPGNTADVTTIHHLKD
                     DLRGWRLHRCVFVGDSGMFSEANRQRLSRALGRYILAVPMRKVTEVQLEVLTRAGRYH
                     DVAHNLRVKEVYVGTGERRRRYVVCHNPDEAAREHAHRERLLELVRAELAALDARQAD
                     HPKKACELMASRRFGRYLRMDARGRLSIDTTKVAAEAKYDGKFVVTTNDDTLDAADVA
                     LGYTSMTLMEGCFRRMKTTGLQTRPIYHWRSHRIIAHVKLCVLALLLERAAELRCQQT
                     WRTIRHTLDQLKVVRYRMHGKTILQSTQVTSPLANILRSLRIPLPKKILEVSD"
BASE COUNT          331 a          580 c          575 g          377 t
ORIGIN      
        1 tgtatctatg gcagacgggt agtgtttgtc tagtcggaca cttccagaat cttctttggc
       61 aagggaatac ggagacttcg gaggatgttg gccagcgggg aggtcacctg ggtactttgc
      121 agaatggtct tcccgtgcat ccggtaccgc accaccttca gttggtccaa ggtgtggcgg
      181 atcgtccgcc acgtctgctg gcaccggagc tcggccgccc gctccagcag caacgccagc
      241 acacagagct tcacgtgggc gatgatccga tgggaccgcc aatgatagat cggacgcgtc
      301 tgcagccccg tggtcttcat gcgccggaag cagccttcca tcagggtcat gctggtgtac
      361 cccagcgcca catccgccgc atcgagggtg tcgtcgttgg tcgtcaccac gaacttgcca
      421 tcatacttgg cttccgccgc cactttcgtg gtatcgatgc tgaggcggcc ccgcgcatcc
      481 atgcgcaggt aacgtccgaa gcggcgcgac gccatcagct cgcaggcctt cttggggtga
      541 tccgcttgcc gtgcgtcgag cgccgcgagc tcggcccgga ccaactccaa cagccgctcc
      601 cgatgggcgt gctcccgtgc ggcttcgtcg gggttgtggc agaccacgta gcggcgtcgc
      661 cgctcgcccg tgcccacgta gacctccttc acccgtaggt tgtgggccac gtcgtggtag
      721 cggccggcgc gggtgagcac ctcgagctgc acctcggtga ccttgcgcat aggaactgcc
      781 agaatgtacc gcccgagggc ccggctcagc cgctgccgat tggcctcgga gaacatgccg
      841 ctgtccccga caaacacgca gcggtgcaac cgccagcccc gcaagtcatc cttgaggtgg
      901 tggatcgtcg tgacatcggc ggtgttgcca ggaaacaccc acgaacgcac gggcaacccg
      961 tcgcgggtga gggccagccc gaccaccacc tggggattac catcgcgacc ctccttatta
     1021 tggccacgtt tgcgcagcgc agggatctcc tggtcctccc acacttcccc gtcgtcatct
     1081 tcgtcgtcga tctcacagta cagggtcgtg gtgtcccaaa agatcagatc tacgtcggcg
     1141 ttcaacagat cggcggtccg aaagaagatc tcttgctcga gggcctcgat atggcgcagc
     1201 aggaaatcca gggcgcgata gaggtgctcc agggcgagga ccttggcctc gggccaatac
     1261 acctcatcgg ccagccagtg ctcgtagcag gccaacttgg aggtgggacg ggccagccgg
     1321 ttagcggtca tggcgaacag ggccgtgtcg tggggggctt cgccaccctc ctgctgcatc
     1381 ttctcgcgca gcagcgggcc gatgccgagc tcttcccaca aggtgtgggc cgcatacagg
     1441 acgccatagt caaagacctg ctcgatgtcg tcgatgccca cctcgggcgg gaacgtgcgg
     1501 gccggtagat caatgcgctc gtcgttggcc acgcgtagga tgctctgggc caggcggcgc
     1561 agggcctcag gatcgacctg gtcggcacgg cctaacgtat ggatgacacg tgtctccgag
     1621 cgccgtctct ccttatggta gtaattttca gcgagctggt agtagatggc gtcgggaccg
     1681 tgtttacgtc gctgtcgagt ggttcggagg tacatgccta ggaatatagc gtgctattcc
     1741 cttcatggca agggatattt tccaatccat gtatctatgt attttgaatc gtttcagcag
     1801 cgaagccttg tcactacagg gtttccgcct ttcaaagtgc ctatacgccg caaactcggg
     1861 tca
//
LOCUS       DASRPQ010001318         1131 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_778973, whole genome shotgun sequence.
ACCESSION   DASRPQ010001318 DASRPQ010000000
VERSION     DASRPQ010001318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_778973"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..>1131
                     /locus_tag="VFD73_15210"
     CDS             134..>1131
                     /locus_tag="VFD73_15210"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HZI75333.1"
                     /translation="MTDAAAPQTGASASVRAAAFPRYPSLIEINTRVWLHRLSCEAER
                     PITLAEVDDASLDELARRGFDWIWLLSVWRTGPASRALSRRNAAWRAEFQAVLPDLTE
                     EDISGSGFAISAYEVDEALGGREALAEFRTRLAARGLRLMLDFVPNHTALDHPWVSAH
                     PEFYVEGSEEDLTRSPQNYSRVKTDHGPRILAHGRDPNFPGWPDTLQLNYSNPVLQAA
                     QLAEMVSIAEQCDGLRCDMAMLLLPEVFQRSWSLTPAPFWPKAIAAVRQSNPEFTFLA
                     EAYWGLEWELQQQGFDYCYDKRLYDRLRTGNATSIRAHLAAGLDYQARLARFLENH"
BASE COUNT          208 a          353 c          354 g          216 t
ORIGIN      
        1 ctgcagacgg acccgcattt caaggactac atcccgttct atgagtactt cgatggcgag
       61 acgggtcggg gactgggtgc ctcgcaccag acggggtgga gcgggttgat cgccaatatg
      121 atcgcggagc tctatgactg acgcggcggc gccacaaacg ggcgcctccg cgtccgtccg
      181 agctgccgcg tttccgcgct acccttcgct catcgagatc aacacgaggg tatggctcca
      241 tcgcctgtca tgtgaggcgg agaggccgat cactcttgcc gaggtcgacg acgctagctt
      301 ggatgagctc gcccgccggg gcttcgattg gatttggctt ctgagcgtgt ggcggaccgg
      361 accggccagc cgggcactgt cgcgcagaaa tgccgcctgg cgggccgagt tccaagcagt
      421 tctgccggat ctgacagagg aggacatcag cggatccggc ttcgcaatca gtgcctatga
      481 ggtcgatgag gcgcttggcg ggagggaagc gttggccgaa tttcgcactc ggctcgcagc
      541 ccgcggtctc cggctcatgc tcgactttgt ccccaaccac acggcactcg atcacccctg
      601 ggtgagtgcc catcccgagt tctatgtcga aggcagcgaa gaggatctga cgagatcgcc
      661 gcagaactat agccgggtca agaccgatca cggcccgcgc atcctggccc atgggcgcga
      721 tccgaatttt cccggttggc cggacacgct gcagctcaac tactccaatc cggtcctgca
      781 ggctgcacag ctcgcagaga tggtctcgat cgccgagcaa tgcgatggcc tgcgttgcga
      841 catggcgatg ctcctgctac cggaggtctt ccagcgcagc tggagcctca cgccggcgcc
      901 cttctggccg aaagctatcg cggctgtgcg tcaatccaat cctgaattca cgttcctggc
      961 cgaagcctat tggggcctcg aatgggagct tcagcagcag ggcttcgact attgctacga
     1021 caaacggctc tatgatcgcc tgcgcacggg gaatgcaaca tccattcgag cccacctggc
     1081 agcgggactg gattaccagg cgcggctcgc ccgttttctg gagaatcacg a
//
LOCUS       DASRPQ010001319         2611 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3310862, whole genome shotgun sequence.
ACCESSION   DASRPQ010001319 DASRPQ010000000
VERSION     DASRPQ010001319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2611
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3310862"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..869)
                     /locus_tag="VFD73_15215"
     CDS             complement(<1..869)
                     /locus_tag="VFD73_15215"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HZI75334.1"
                     /translation="MSAPTMLTTRATTDLVVNARHLTGPKTGIEVYIEQLIQALARTG
                     EVNITAVTWSPLALDLPGVREVIPARRPQLTGLAAVVWKLWFDQWEAFRAAAPSSGAL
                     YHGMDGFLPYSLRARDRSVVTVHDLGWHLHPDLFDRRVRLMYRALFPWVRRRADRFIA
                     VSRYTADDLMRWAGVPSAKIEVIYHGLDPVFTSRAEPAAPPTSSPYLLAMGGISPARK
                     NTRRLIAAFDRWRSRGGHRTEFRLLLTGVALDRDLFQGQPIPAGVSWIGYVDKAELPQ
                     LYAGASAFLYPGI"
     gene            complement(866..2029)
                     /locus_tag="VFD73_15220"
     CDS             complement(866..2029)
                     /locus_tag="VFD73_15220"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HZI75335.1"
                     /translation="MRIGVMLRHYDQHGGGVKVYTQRLLRALFDLRTDHQFVLLYRTP
                     SLLGTYGTEPGVQEVLLHARSILTWDQIAVPQAVRRYGIDLLYNPKYSIPLTASCPAV
                     WVCHGLDWYVMPWASKRIDRLSHRFLVPRYASRAAAIIAVSEVTRQHVMQYLRVPPDR
                     VVTVYSGVDDVFRAPQNEARLREIRAKYSLPERFLLYAGAIYPPKNFSRLVRAYAQVG
                     PQRGIPLVVAGGENRFLSEHELREPAVLGIAEWVRWPGWVEQEDLAAFYSLADALLLP
                     SLFESCGLPVLEAMAAGTPVVTADRYGTRELAQGAAVLVDPESTESIADGMQRVLEDA
                     ELRARLISAGRERSKQFQWRRCAQETLHVLEEVGPRKSSSKGQQMTYPAGARS"
     gene            complement(2113..>2611)
                     /locus_tag="VFD73_15225"
     CDS             complement(2113..>2611)
                     /locus_tag="VFD73_15225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75336.1"
                     /translation="ATSSSDIHDKEQPRSARDSLAERGCCRSYWFLHRPGGSVRSLWF
                     LPAIACLACSKGAVQDTNPAAVAPGSPDSTVAADSREEIPAEWTIAEDTSAAGEVTTA
                     SLQLPAAKTIDGLSSDRPRLILRCIDGRVAAFISGAAGTDVDSGPSPVQEPVPVQLDS
                     APPCE"
BASE COUNT          517 a          834 c          843 g          417 t
ORIGIN      
        1 tagatgccgg ggtagaggaa ggcgctcgcg ccggcgtaca gctggggcag ttcagccttg
       61 tcgacgtagc cgatccatga cacccccgcc ggaatcggtt gaccttggaa caggtctcga
      121 tccaacgcga cgccggtcag cagcaggcgg aactcggtcc ggtggcctcc ccgggagcgc
      181 cagcggtcga aggccgcgat caggcggcga gtgttcttgc gggcaggaga aatccctccc
      241 atagccagca gatacggcga cgaggtcggg ggtgccgccg gctcagcgcg cgaggtgaag
      301 accggatcga ggccgtggta gatgacctcg attttcgccg acggcacgcc ggcccagcgc
      361 atcaggtcgt ctgccgtata gcgcgagaca gcgatgaaac ggtcggcacg gcggcgtacc
      421 cagggaaaca gcgcgcgata catcagccgc actcggcggt cgaacagatc ggggtgcagg
      481 tgccagccca gatcgtgcac ggtaacaacc gagcggtcgc gagcacgcag tgaatacggc
      541 aggaatccat ccatgccgtg gtacagcgct ccgctgctcg gagcagcggc ccggaacgcc
      601 tcccactgat cgaaccagag cttccagacc accgccgcca gccccgtgag ctggggtcgc
      661 cgggccggta tcacctcgcg aaccccggga agatcgaggg cgagcggaga ccaggtgacc
      721 gcggtgatgt ttacctctcc ggtgcgcgct aatgcctgga tcaactgctc gatgtagacc
      781 tcgatgccgg tcttgggacc ggtcaagtgc cgagcattga ccacgaggtc ggtcgttgcg
      841 cgagtggtca gcatcgtggg agcactcacg aacgagctcc cgcagggtag gtcatctgct
      901 gccccttgga cgagctcttt ctcggcccaa cctcctccag gacatggaga gtctcctggg
      961 cgcaccggcg ccattgaaac tgtttactcc gctcacggcc cgcggaaatc agcctcgcgc
     1021 gaagctcagc atcctcgagc actcgctgca tcccgtcggc tatgctctcg gtcgactccg
     1081 ggtcgaccag cacggccgca ccctgggcca gttccctggt gccatagcgg tccgcggtca
     1141 cgaccggagt accggccgcc atcgcttcca ggacgggaag gccgcaggac tcgaagagcg
     1201 agggaagcag gagagcatcg gccagcgaat aaaacgctgc cagatcttcc tgctcgaccc
     1261 agcccggcca gcggacccac tcagcgatgc cgagcaccgc gggttcccgc aattcgtgct
     1321 cggacaaaaa acgattctcg cctcccgcga cgaccagcgg tatcccgcgc tggggaccga
     1381 cctgggcgta ggcccgaacc aaccggctga agttcttggg agggtaaatg gcaccggcat
     1441 agagaaggaa gcgctccggc aacgagtact tcgcccgaat ctcccgaagg cgagcctcgt
     1501 tctgcggcgc ccgaaagaca tcatcgacac cggaatacac cgtgaccacc cgatcgggag
     1561 ggaccctgag gtattgcatg acgtgctgtc ttgttacctc agataccgcg atgatcgccg
     1621 ctgcccggga cgcgtatctc ggcacgagaa atcggtgact cagccggtcg atgcgcttgg
     1681 atgcccaggg catgacgtac cagtccaggc cgtgacatac ccagactgcc ggacacgacg
     1741 cagtgagtgg gatggaatat ttcgggttat agagaagatc gatgccgtaa cggcgcactg
     1801 cctgggggac cgcgatctgg tcccaagtca gaatggagcg agcatggagc aagacttcct
     1861 gaacgccggg ttccgtgccg taggtgccta aaagcgaggg cgtgcgatag agcaggacga
     1921 attggtggtc ggtacggaga tcaaacagcg cgcggaggag ccgctgggtg tagaccttga
     1981 cgccaccccc atgctggtcg tagtgccgca gcatcacgcc aattcgcacg actgctcctc
     2041 aaaagatgag ccgcgtaagc tatcatcccc cgtccgacga cacacgggcg ggagaggact
     2101 cgatgctaat tctcactcgc agggaggtgc agagtcgagc tggaccggga ccggctcctg
     2161 cacagggctg ggtccgctgt ccacatcggt ccccgccgct ccactgataa acgccgccac
     2221 tcgaccgtcg atacagcgca agatgagtcg gggccggtcg ctggaaagtc catcgatggt
     2281 cttggcagcg ggcagctgca gcgaagcagt cgtaacttct cccgccgccg acgtgtcctc
     2341 ggcaatggtc cactcggccg ggatctcttc cctgctgtcc gccgcgacgg tcgaatcggg
     2401 tgacccgggc gccactgcgg cgggattcgt gtcctgcacc gcccccttgg agcaggccag
     2461 gcaggcaatt gcgggaagga accacaggct gcgcacagat cctccgggcc gatgaagaaa
     2521 ccagtatgag cggcagcagc cgcgctccgc cagtgaatct ctggccgatc gcggctgctc
     2581 cttgtcgtgg atatcgctac tgctagttgc c
//
LOCUS       DASRPQ010001320         1167 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4222165, whole genome shotgun sequence.
ACCESSION   DASRPQ010001320 DASRPQ010000000
VERSION     DASRPQ010001320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4222165"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(717..>1167)
                     /locus_tag="VFD73_15230"
     CDS             complement(717..>1167)
                     /locus_tag="VFD73_15230"
                     /inference="COORDINATES: protein motif:HMM:NF012564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HZI75337.1"
                     /translation="VPPTIGQLIGQNRTHNWATHVASFFNPQGWHYVLGESILIILFT
                     YFYTAVTFNPVDQADNLKKYGGFIPGVRPGRPTAEFLDRILARLTFPGALFLAAVAAL
                     PTILINQTSANFFFGGTSILIVIGVALDTMKQLEAQLMMRNYEGFLK"
BASE COUNT          219 a          376 c          371 g          201 t
ORIGIN      
        1 tatcggcctg ctgaccgagg tcggtccctt ccttgacgtt ggaccgcagc atgtcgccgg
       61 tggagatgaa cggcacctgg aaatcctctt ggagccgctg ggcttgagtt ccctttcccg
      121 ctcctggcgg gccaagcaag atgaggtcga gctcagacac gaggcaccac tgtatcgacg
      181 cagggaacgc ggtgacggag gattgatccg gcggaccccg gtgcggcgcg cccccgcacc
      241 acaccggaga acctccgaaa acccccgccg tcaagacagg ccccctacca aggtgccgag
      301 cgctgcctac tcttgccccc agcgggcagc gcttgactcc cttgtggacg gcaagatacg
      361 gcctgagccc aggccttcac accaggaagg caccctagtt ttaggtaggt tttggcgagc
      421 tgtgaccgag agggaggggc ccggcttccg tgccgcccac agaaagctgc ggtcggccgg
      481 cttccgtgcc gcccacagaa agctgcggtc ggccggctcc cgtgccgacc acccgcagct
      541 ttgccccttc agctcccgcg ccccggggag cctggtaatg aagagtgctg ccaattgccc
      601 cacaaccgca gcaccggtgt gtcgtacaag ctaagccgtc gaccacggct tcgcaccagg
      661 gtcgcacccc agggtttagc ggacagctgt gagccggccc gcacgcgggc cgggagctac
      721 ttcaagaagc cctcgtagtt gcgcatcatc agctgcgctt cgagctgttt catcgtgtcc
      781 agcgcgacgc cgatcacgat caggatcgac gtgcctccga agaagaagtt ggcgctggtc
      841 tgattgatga ggatcgtcgg caacgccgca actgcagcca ggaacaatgc tcctgggaac
      901 gtcaggcgag caaggatgcg gtcgaggaat tcggccgtgg gcctacctgg tcgaaccccc
      961 gggatgaagc ccccgtattt cttgaggttg tcggcctggt cgacgggatt gaacgtaacc
     1021 gccgtataga agtacgtgaa caagatgatc aggatgctct cgcccagcac gtagtgccac
     1081 ccctgcggat tgaagaacga ggcgacgtgg gtggcccagt tgtgggtgcg gttctgcccg
     1141 atcagctgcc cgatcgtcgg cggcacg
//
LOCUS       DASRPQ010001321         1315 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2343099, whole genome shotgun sequence.
ACCESSION   DASRPQ010001321 DASRPQ010000000
VERSION     DASRPQ010001321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1315
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2343099"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            733..>1315
                     /locus_tag="VFD73_15235"
     CDS             733..>1315
                     /locus_tag="VFD73_15235"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YsnF/AvaK domain-containing protein"
                     /protein_id="HZI75338.1"
                     /translation="MFTQEEARTLAGATAYDQVGQKVGQVATVYQDQATGEPEWLTVK
                     TGLFGMKETFVPLALARTRGQGEVELAAGKDTITSAPKIDPDGELSPAEEQQLYSYYG
                     LGYGQWDSPAGLPGTSGQAAAGGYGAPGAQGHDTSGPTTDEAMTRSEERMRVGTASEE
                     TGRVRLRKYVVTETVTQQVPVSHEEVRLEREPIT"
BASE COUNT          225 a          404 c          458 g          228 t
ORIGIN      
        1 ccgaacgtcc aggtcagtcc gagattgcca ggctggccag ttcccagagc ttgcagatgg
       61 cggcttagtc ctacggcatc caaggtggtc catggctgtt gttagaaaat ccgttagcaa
      121 gatcggatct ctcaacggca gacagatcgt cgatgactca gagcctcttc gtctagaggc
      181 gccgctgggt gttgcccgtc ctcccagcta gctcagtgtg gctggtcgtg cccgctggtg
      241 gtggctgtat ggggacgctg ctgtacttcg cgctgtacgg tatgtgccgc atgagcagct
      301 cgggcgcaac ggtccgcgtc ggtttcaggc tggagcgatg tgcttgatcg ggtccttcac
      361 ggacaatgcc gcatgacatt gaactgcagc ccggagtgca actttccgat ccgtgcatca
      421 gtgcggcccc gccaagacgt ggaatccata accgcaggta gaaggccatg agattgaccg
      481 ggccggacgc ttggggtccg ccggttgcgg ccagatcgtg cgatggctga ggtaccggcc
      541 ttcccctgcg cggtccgccg ggttctggct agattcggtc gaaaggctgg cttgtcggct
      601 ggtcagagca tgatcaacta tttttcgtaa ctttttcggc ttgaggtgga atcgcttcca
      661 cctccggggg taaggcgccg gtttcgttta cccgaccggc tccccagatg gggggctgct
      721 ggaggagatt gtatgttcac ccaggaagag gcccgcaccc tggccggggc taccgcctat
      781 gaccaggtgg ggcagaaggt cggccaggtg gccaccgtct accaggacca ggcgaccggg
      841 gagccggaat ggctgaccgt caagaccggc ctgttcggga tgaaggagac cttcgtgccg
      901 ctggccctgg cccggacccg cgggcagggc gaggtggaac tggccgccgg caaggacacc
      961 atcacctccg cgccgaagat cgacccggac ggggaactgt ccccggctga ggaacagcag
     1021 ctgtacagct actacgggct cggctacggc cagtgggaca gccccgccgg cctgcccggg
     1081 accagcggcc aggccgccgc gggcggctac ggcgcgccgg gcgcgcaggg tcatgacacc
     1141 tccgggccga ccaccgatga ggcgatgacc cgctcggaag agcggatgcg cgtgggcacg
     1201 gcctccgagg agaccggccg ggtccggctg cgcaagtacg tggtcaccga gacggtgacc
     1261 cagcaggtgc cggtcagcca cgaggaggtc cgcctcgagc gcgagccgat caccg
//
LOCUS       DASRPQ010001322         1097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1088866, whole genome shotgun sequence.
ACCESSION   DASRPQ010001322 DASRPQ010000000
VERSION     DASRPQ010001322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1088866"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..491)
                     /locus_tag="VFD73_15240"
     CDS             complement(<1..491)
                     /locus_tag="VFD73_15240"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase/maturase family protein"
                     /protein_id="HZI75339.1"
                     /translation="MQDAGTVLEVLRERGGKGLPCDELYRQMFNTSLYLLAYGRIYSN
                     QGAMTPGACDETADGMSEAKIAAIIAAMRGERYRFAPVRRVLIPKKNGKFRPLGLPSW
                     SDKLVGEVVRLLLEAYYEPSFSGHSHGFRKGRGCHTALRDIQKTWSGTTWFIEGDISD
                     CYGS"
     gene            complement(858..>1097)
                     /locus_tag="VFD73_15245"
     CDS             complement(858..>1097)
                     /locus_tag="VFD73_15245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75340.1"
                     /translation="VIVWLAWIQLVWCVLLEIKAAATALRGAVLYRSRSEQGWEELSL
                     DLMADLDLKGEGDNSMPGNRQLMPRRMGWCAGGSA"
BASE COUNT          195 a          400 c          293 g          209 t
ORIGIN      
        1 gacccgtagc agtcggagat atcaccctcg atgaaccatg tggtcccgct ccaggttttc
       61 tggatatccc gcagcgccgt atggcacccg cgccctttgc ggaacccgtg cgaatggcca
      121 gagaacgacg gctcgtaata cgcctccagc aggagccgca ccacctcgcc gacgagctta
      181 tctgaccacg acggcaggcc cagcggccgg aatttcccgt tctttttcgg gatcagcacc
      241 cggcggaccg gggcgaaacg gtaccgctca ccgcgcatcg ccgcgatgat cgccgcgatc
      301 ttcgcctcgg acatgccatc agcggtctca tcgcaggccc ccggcgtcat cgccccctgg
      361 ttggagtaga tgcgcccgta ggccagcaga tacaggctcg tgttgaacat ctgccggtag
      421 agctcgtcac acggcaggcc cttcccgccg cgctcacgga ggacctcaag taccgtcccg
      481 gcgtcctgca ttacgcatac ctcacggtcc ctttgacgtc cgtcgcctgt gccccttcgc
      541 cctgtggtcc ggctctcccg gtctccagaa ttggcaggtc gtcacccctg cgactactac
      601 gggcactctg tcgccctagg actcgcgtcc cgtaggcgat cccacgttca acagtgctat
      661 acgtcctagc gtgacttagg cgtcccgttc atctccttca ataccctgac agggcatcgt
      721 tcctgcaccc cggaggattg cggcaggcca accagaatcc tgccgcaggg gccggcgccg
      781 gttacaggcg tctttccggc gggcgaggca ttgcgcctac tggagactgg gattcaggca
      841 atccagcttt cgccatatca cgcggatccc ccggcacacc accccatacg cctgggcatg
      901 agctgccggt ttcctggcat gctattgtcc ccttcacctt tcagatccag gtcagccatc
      961 agatccagag ataactcctc ccatccctgc tcgctacgcg agcgatataa cactgcgcct
     1021 cgtagcgcag tggccgccgc cttgatctcc agcagcacgc accacaccag ctggatccag
     1081 gccagccaga cgatcac
//
LOCUS       DASRPQ010001323         1227 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1415976, whole genome shotgun sequence.
ACCESSION   DASRPQ010001323 DASRPQ010000000
VERSION     DASRPQ010001323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1415976"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1227)
                     /locus_tag="VFD73_15250"
     CDS             complement(<1..>1227)
                     /locus_tag="VFD73_15250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75341.1"
                     /translation="HIKGDPGWWAWFDQERYFKAAQAWARGDLTPTEHHYLPGYPLLG
                     APFVKLVSVHAYLVVDLICLLVSLWLFSAIASRLAPRLWHARAVGAAVFTLVAAVSPL
                     GSAIWVVPWSTTGAAPLIFGSLLAAIIFIKQPAPLPAFATTFLGTLIVVFRPTDVVPL
                     MLACACGMSAALLRAWPGSAGAARSVAAALAGGTLAAGIAVLAYLPIYGWHSSQYLTS
                     SRLIGFDWGLVPLHWVTIMLDPRPLLDNGQGLFEAFPWMVPGMCGLVVFVLLPLRRSD
                     RLMHLTVALAVVLYTAVYLAYRDLHPDNLFQFRLYHYFKWAYPILAFYAVLLVHAVAT
                     ERGSRCQVATVALLVACVTLPWRAELEVSSGLVHATSAGDGTVRFDSDLTSVRDGLLF
                     AASGAYHAIYLGLHSLT"
BASE COUNT          297 a          370 c          391 g          169 t
ORIGIN      
        1 gtcagactgt gtaggcctag gtagatcgcg tgatacgcgc cggacgctgc gaacagtagc
       61 ccgtcacgca ccgatgtcag gtcactgtcg aagcgaaccg tcccatctcc tgccgacgtg
      121 gcgtgcacca gtccgctgga cacctccagc tcagcccgcc agggcagcgt cacgcaggcc
      181 actaagagtg caacagttgc tacctggcaa cgcgagccac gctctgtcgc aacagcatgc
      241 acaagcagaa ctgcgtagaa ggcgaggata ggataggccc acttgaaata gtgatagagc
      301 cggaactgaa agaggttgtc cgggtggagg tcgcggtagg ccagatatac ggccgtgtag
      361 agtaccacgg ccaaagcgac ggtcaggtgc atcagccgat cggaacggcg aagcggcaga
      421 agcacgaaga ccacaaggcc gcacattccg ggcaccatcc acgggaatgc ctcgaacaga
      481 ccctgcccat tgtcgaggag cggacgtggg tcgagcatta tcgtcaccca gtgaagcggc
      541 acgagccccc aatcgaatcc gatcagcctg gagctcgtga ggtactgact ggaatgccat
      601 ccgtagatcg gcaagtaagc cagaaccgcg atgcctgccg cgagggtccc gcccgctaat
      661 gccgcagcta cggacctggc tgccccggca cttccaggcc aggctcgcag caacgccgcg
      721 ctcatgccgc aagcacacgc gagcatcagc ggcacgacat cggttggccg gaacacgaca
      781 atgagcgtcc caagaaaggt ggtcgcgaag gcgggcagcg gagcgggttg cttaataaag
      841 atgattgcgg cgagcaggct gccgaagatc agcggcgcgg ctccggtcgt cgaccaaggc
      901 acgacccaga tcgcagatcc gagtggagat acagcggcca cgagcgtgaa aacggccgct
      961 ccaacggcac gggcgtgcca caatcgcgga gcaaggcgtg aggcgatagc cgagaacagc
     1021 cagagcgaga ccaggaggca aattagatcc accaccagat aggcgtgcac cgacacaagc
     1081 ttcacgaagg gcgcgccgag gagcggatag ccaggcagat agtgatgttc ggttggggtg
     1141 agatcgccac gagcccaggc ctgcgccgcc ttgaagtaac gttcctgatc gaaccaagcc
     1201 caccagccgg gatcaccttt tatgtgg
//
LOCUS       DASRPQ010001324         1541 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4222385, whole genome shotgun sequence.
ACCESSION   DASRPQ010001324 DASRPQ010000000
VERSION     DASRPQ010001324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4222385"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            346..819
                     /locus_tag="VFD73_15255"
     CDS             346..819
                     /locus_tag="VFD73_15255"
                     /inference="COORDINATES: protein motif:HMM:NF024857.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HZI75342.1"
                     /translation="MKSFEAPHRHDLVPGHGDGPGALTVRPLADNRAGLRLEGEADLT
                     GQPRLREALAALPPAARIHLDLAGLDFIDIAATRQLIALTQQPPHPRLILHDPPPALI
                     RLTQLLWPDANVEFCLSLSKIIDHDGEAPGRRRKPSQTAGLVSRFLPRPRAMTPR"
     gene            816..1259
                     /locus_tag="VFD73_15260"
     CDS             816..1259
                     /locus_tag="VFD73_15260"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI75343.1"
                     /translation="MTAQPALRTADVLLVEDDAGDALLTTEAFARYHVHGTLHVAGDG
                     EQAMQFLRRTGDFTNAPRPGLILLDLNLPRRSGLEVLADVKSDHDLRSIPVVILTTSQ
                     AEEDIIHSYSLHANAYVTKPIDFERFSEALRQINDFFLTLVQLPN"
     gene            1298..>1541
                     /locus_tag="VFD73_15265"
     CDS             1298..>1541
                     /locus_tag="VFD73_15265"
                     /inference="COORDINATES: protein motif:HMM:NF016430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor"
                     /protein_id="HZI75344.1"
                     /translation="MTVAADPGAWSRGNLDRCADYELVHKVQLLPRASAEREAACEVL
                     IVRYQPLVRSCALRYREAPETTEELMQAGYVGLLKAI"
BASE COUNT          276 a          571 c          443 g          251 t
ORIGIN      
        1 acagcctgtg gccgctggcg ctccggtcgg gaatcaccag tccgtaccgg tcttcccagg
       61 tccggatcgt ggcaacaggt acgccgatca tccgggacac cgcgctaatg ctgtagaccg
      121 cgcgccctgt tccgttcacg gccctaccct accggcccgc aggccctccg ggccgggcgc
      181 tccggtcatc atctcgtcat aacctactca aactgtgagc ttgactcctc atatcctctt
      241 cacatagtca acatacccgg ataggctggc cgtgtcctgc actcccttgc gggccctagc
      301 cagccaccga agaggccgga gccagctatt gaagaggtcg agatagtgaa gagcttcgag
      361 gcgccgcacc ggcatgacct ggtccccggc cacggcgacg gccccggtgc gctcaccgtg
      421 cgccctctgg cggacaacag ggctgggctg cggctcgaag gcgaggcaga cctcaccgga
      481 cagccccggc tccgcgaggc actcgcagcc ctgccgcccg ccgcgagaat ccacctcgac
      541 ctcgcaggac tggatttcat cgacatcgcc gctacccgcc agctcatcgc cctcacccag
      601 cagcctcccc acccccgcct catcctgcac gacccgcccc cggccctcat ccgcctgacc
      661 cagctgctct ggcccgacgc gaacgtggaa ttctgcctct ccctcagcaa gatcattgac
      721 cacgacggcg aagcaccagg ccggaggcga aagccaagcc agaccgcagg tcttgtttca
      781 cgctttctgc cccgcccgcg agccatgacc ccccggtgac cgcccaaccc gcgctcagga
      841 ccgccgacgt cctgctggtc gaagacgacg ccggcgatgc gctcctgacc accgaagcct
      901 ttgcgcgtta ccacgtccac ggcaccctgc atgtggcggg cgatggcgag caggccatgc
      961 agttcctgcg ccgcaccggc gacttcacca acgcgcccag gccagggctg atcctgctcg
     1021 atctgaacct gccgcgccgc agcggtctgg aggtcttggc cgatgtgaaa tccgaccacg
     1081 acctgcgctc catccccgtg gtaatactca ccacctcgca ggccgaggaa gacatcatcc
     1141 acagctactc cctgcacgcc aatgcctacg tcaccaaacc catcgacttc gagcgcttca
     1201 gcgaggcact caggcagatc aacgacttct tcctcacact ggtgcagctg ccgaactgag
     1261 cacgcacgat cattcacccc cgagaaggtg atcatgaatg acggtggctg ctgatccggg
     1321 cgcatggtcg cggggcaacc tcgatcgttg cgccgactat gagcttgttc acaaggtgca
     1381 gttgctgccg cgggccagcg ccgagcgtga ggcggcgtgt gaggtgctga tcgttcgcta
     1441 ccagccgctg gtgcggtcgt gcgcgttgcg ctaccgggaa gccccggaga cgaccgagga
     1501 gctgatgcag gccgggtatg tgggcctgct gaaggcgatc a
//
LOCUS       DASRPQ010001325         1043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2687136, whole genome shotgun sequence.
ACCESSION   DASRPQ010001325 DASRPQ010000000
VERSION     DASRPQ010001325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2687136"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..471)
                     /locus_tag="VFD73_15270"
     CDS             complement(<1..471)
                     /locus_tag="VFD73_15270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75345.1"
                     /translation="MKVFNDLELDRGQLHLLQHATPENIRRAQGAAERRIRPFLKYIR
                     EAVYYRTIDGWYCQVRVMDIRWSFGRVDFLVEQGDKIAWVSHKLCFLPPGSKRLRNTG
                     SVDVVRKPEGQDEDSQAEGPDSPGGAGFGPAFADGRGQYAATEGARDPATGRLLP"
     gene            complement(500..730)
                     /locus_tag="VFD73_15275"
     CDS             complement(500..730)
                     /locus_tag="VFD73_15275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75346.1"
                     /translation="MSEKLELRIPLHYAVTKVAVERDGEDLLLCLTCANDKAEHVAVH
                     LGSSAISRLVEVRQAAKQAEAEQAAELLKRFT"
     gene            complement(727..>1043)
                     /locus_tag="VFD73_15280"
     CDS             complement(727..>1043)
                     /locus_tag="VFD73_15280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75347.1"
                     /translation="CTNKPTWTVREWLRLNEELASKARDLCTQMVLCAPDLDRATQRL
                     ILGQDLADMVCYELEGDSPGSVTTGPDPMVGLGTDLVTWALSLVCWEEVADAFLTEAP
                     PE"
BASE COUNT          160 a          375 c          318 g          190 t
ORIGIN      
        1 gggcagcagc ctacccgtcg ccgggtctct ggccccctcc gtggcggcgt actgccccct
       61 accgtctgcg aaagcgggcc cgaacccagc ccccccgggc gagtccgggc cctcggcctg
      121 agagtcctca tcctggccct caggcttacg cacgacgtcc accgaccctg tgttcctgag
      181 ccgcttactg cccggcggca ggaagcagag cttgtgcgac acccaggcga tcttgtcccc
      241 ctgctcgacc aggaagtcca ccctcccgaa cgaccagcga atgtccatca ccctgacctg
      301 gcagtaccag ccgtcgatgg tgcggtagta gaccgcctcg cggatgtact tgaggaaggg
      361 ccggattctg cgctccgccg ccccctgcgc gcggcggatg ttttctggcg tagcgtgctg
      421 cagcaagtgc agttggccac ggtccagctc cagatcgttg aagaccttca tgccctccac
      481 cttagctctt ttcggagtct caggtgaagc gcttgagcag ctcggcggcc tgttcggcct
      541 cggcctgctt ggccgcctgg cgcacctcaa ccagcctaga gattgcggag ctgcccaggt
      601 ggacagctac gtgctcggcc ttgtcgttgg cgcacgtcag acagaggagc aggtcctcac
      661 cgtctcgctc cacggccacc ttcgtgaccg cgtagtgcag gggaatccgg agttccagct
      721 tctcactcat tcgggcggcg cctccgtcag gaaggcatcc gccacctcct cccagcagac
      781 cagggacagg gcccaggtta ccaggtctgt gcccagaccc accatagggt cagggccagt
      841 cgtcacgctg ccggggctgt cgccctccag ctcgtagcac accatgtcag ccaggtcctg
      901 gccgaggatg aggcgctgtg tcgcgcggtc caggtcgggg gcgcacagaa ccatctgcgt
      961 gcacaggtcc cgggccttgg acgccagctc ctcgttcagc ctcagccact ccctgacggt
     1021 ccaggtgggc ttgttcgtgc agt
//
LOCUS       DASRPQ010001326         1628 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4549842, whole genome shotgun sequence.
ACCESSION   DASRPQ010001326 DASRPQ010000000
VERSION     DASRPQ010001326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4549842"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1343
                     /locus_tag="VFD73_15285"
     CDS             <1..1343
                     /locus_tag="VFD73_15285"
                     /inference="COORDINATES: protein motif:HMM:NF033580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZI75348.1"
                     /translation="AVPFAFKDYADVWAAMDGDLGAHVRSAVEARGLYLFPRSLDNGF
                     RNITTSTKPIEKVEDLAGLKIRVPPAPLWVSTFKALGASPTSISLAELYSALQTKIVD
                     GQENPLVQIETVKIYEVQKYCSMTGHVWDGNWVAANGKRWTALPEDARKLISDRFDAA
                     ALKRRFSQLPLVVAEWCDTWGPYLCLAGQTWRTALDSRILRLIATVIEVCEPPREHGP
                     GHPPAETVRVLRTLRRFLREGTPWRSLTATRDQASGSTLRRWMTRWAETGVLAQVHAL
                     LIGMLRGHPDLILDSCSVRAKRGGDLTGPNPTDRAKRGTKYNVAVDGDGVPVACVATA
                     ANVNDTLVFERLFLAAFAVMARIRTVFADKGYDAEHHRELCRFFGVTPQIYLRGQPPG
                     SGLGRRRWPVERSNAWVLENKRLALRYDRLGFIIQSLLQSACIFLVAKRLARQF"
     gene            complement(1449..>1628)
                     /locus_tag="VFD73_15290"
     CDS             complement(1449..>1628)
                     /locus_tag="VFD73_15290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75349.1"
                     /translation="HTELRPEVVMLAKRLYRASPKTGKRRSLRAIAAELAQVGHLNER
                     GKPYAAQSIKMMLQA"
BASE COUNT          286 a          501 c          535 g          306 t
ORIGIN      
        1 atgctgtacc gttcgccttc aaggactacg cggatgtctg ggcggcgatg gacggggacc
       61 tcggtgcaca cgtcaggtcg gccgtcgagg cgcgtggcct ctatctgttc ccgaggagct
      121 tggataacgg cttccgcaac atcacgacca gcaccaagcc aatcgagaag gtcgaggacc
      181 ttgcagggct gaaaattcgg gtgccgcctg ctccactctg ggtttcgacg ttcaaagctc
      241 tgggtgcttc accaacgtcg atcagcctgg ccgaactcta ttccgcgctt cagaccaaga
      301 ttgtggacgg gcaggaaaac ccgctcgtgc agatcgagac ggtgaagatc tacgaggtgc
      361 agaagtactg ttcgatgacg gggcacgtct gggacggaaa ctgggttgcg gcgaatggca
      421 agagatggac cgctttgccc gaggatgcgc gcaagctcat ttctgaccgg ttcgatgctg
      481 cggcgcttaa gaggcggttt tcacaattac ccttggttgt ggcggaatgg tgcgatacct
      541 ggggtccata cctatgtctg gcgggtcaga catggaggac agccttggac agcaggattt
      601 tgcgcctgat tgcgaccgtg attgaggtct gcgagccgcc acgagagcat ggaccgggcc
      661 acccgccggc cgagacggtc cgggtgctga ggaccttgcg gcgcttcctg cgcgagggca
      721 cgccctggcg cagcctgacc gcgacacggg accaggccag cggctcgacc ctgcggcgat
      781 ggatgacacg ctgggccgag acgggtgtgc tggcgcaggt gcacgccctg ctcatcggca
      841 tgctgcgggg tcatcccgac ctgatcctgg acagctgctc ggtgcgcgcc aaacgcgggg
      901 gcgatctcac cgggcccaat ccgaccgacc gggccaagcg ggggaccaag tacaatgtcg
      961 cggtggatgg agacggtgtg ccggtcgcgt gtgtggcgac tgcggccaat gtcaacgaca
     1021 cgctcgtctt cgagcgcctg ttcctggctg ctttcgcggt catggcccgg atccggaccg
     1081 tgttcgccga caaagggtat gatgccgagc atcatcgcga gctatgccgc ttcttcggtg
     1141 tcacgcccca gatctacctg cgaggccagc cacccggctc aggtctgggt cggcggcgct
     1201 ggccggtgga gcgcagcaac gcgtgggtgc tggaaaacaa gcggctcgcc ctgcgctatg
     1261 accggctcgg gttcatcatc cagtcgctgc tccagagcgc atgcatcttc ctggttgcaa
     1321 aacgcctcgc gcgccaattc tgaaaaccgc ctctaaggaa gctgggcgag cacgcgcgag
     1381 acctggacca gcgtctcccg cttggttagc cctctggcca gcccatcacg ccggttacct
     1441 tattcaggtc acgcctgcag catcatcttg atcgactgcg ctgcataggg cttgccgcgc
     1501 tcatttaggt gaccgacctg tgcaagttcg gccgcgatcg cccggagcga gcggcgcttg
     1561 cccgtcttcg gcgaggcccg gtagagccgc ttggccagca tcaccacctc aggccgtagc
     1621 tccgtatg
//
LOCUS       DASRPQ010001327         1153 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4549953, whole genome shotgun sequence.
ACCESSION   DASRPQ010001327 DASRPQ010000000
VERSION     DASRPQ010001327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4549953"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            232..945
                     /locus_tag="VFD73_15295"
     CDS             232..945
                     /locus_tag="VFD73_15295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_026155209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HZI75350.1"
                     /translation="MTSATKNPYAGHRFPPELISYTVWLYFRFPLSLRMVEEMLAFRG
                     VEVSYETIRQWGLKFGQEFANIVRRRLPRPGDKWHMDEVVLKIAGKTHYLWRAVDQHG
                     VVLDVLVQRRRDKKAAKRLLRKLLKRQCRAPRVMITDKLRSYGAAKREIMPGVEHRQH
                     KGLNNRAENSHQPTRRRERQMKRFKSARQAQRFLSAHDQINNLFLLPRHRMPATEYRA
                     ARAQAFEAWHEVCSIKVAA"
BASE COUNT          228 a          395 c          335 g          195 t
ORIGIN      
        1 tctgcgaacg tatcaagaga agattgatga ccatgacact caagacgcat gaatccaata
       61 cggcactcac tcacctggag aatgcttgtt agccccaata ccgttaactt tgggcgtctc
      121 tggctgttga agctgatctg ccgtcgatga agttggacac cggattgtgg caccgtcaag
      181 ttaacggcgg actgggttgc ctgagcggcg tgggtcgggt atgaggcggg tatgacgagc
      241 gcgaccaaga acccctacgc cggccaccgc ttccccccgg agctgatcag ctacacggtc
      301 tggctgtact tccgctttcc gctcagcctg cgcatggtcg aggagatgct ggccttccgc
      361 ggcgtcgagg tcagctacga gaccatccgg caatggggcc tcaagttcgg ccaggagttc
      421 gccaacatcg tccgccggcg gctgccccgg ccgggcgaca agtggcatat ggatgaggtc
      481 gtgctcaaga tcgccggcaa gacccactat ctctggcggg cggtcgacca gcacggggtg
      541 gtgctcgatg tgctggtcca gcgccggcgc gacaagaagg cggccaagcg gctgctgcgc
      601 aagctgttga agcggcaatg ccgggcccct cgcgtcatga tcaccgacaa gctgcgctcg
      661 tacggcgcgg ccaagcggga gatcatgccc ggggtcgagc atcgccagca caagggcctt
      721 aacaatcggg cggagaactc ccaccaaccg acccgccgac gagaacgcca gatgaagcgc
      781 ttcaagtcgg cccgacaggc tcaacggttc ctctccgccc acgaccagat caacaacctc
      841 ttcctcctgc cccgccaccg catgcctgca accgagtacc gcgccgcccg ggcccaggcc
      901 ttcgaggcgt ggcatgaagt ctgcagcatc aaggtggctg catagcccgc atcatccctg
      961 ttcgccgtcc agctcgccca gctctcgtct cgcgcccaac aagttgacgg tgccagataa
     1021 agtcccgctt gccgccgcgg ctccggccgc acgaagagct cgcccagccg atcctgcacc
     1081 tgctccagtt catcccgcca ctggtccaaa acgaccggct tcaccaccat gcccacgtcg
     1141 atcaacaccc tac
//
LOCUS       DASRPQ010001328         1145 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3311653, whole genome shotgun sequence.
ACCESSION   DASRPQ010001328 DASRPQ010000000
VERSION     DASRPQ010001328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3311653"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            177..>1145
                     /locus_tag="VFD73_15300"
     CDS             177..>1145
                     /locus_tag="VFD73_15300"
                     /inference="COORDINATES: protein motif:HMM:NF014851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta galactosidase jelly roll domain-containing
                     protein"
                     /protein_id="HZI75351.1"
                     /translation="MALLLLLCAADFPDFAKPGPPPGQIELAQGWSLVSARNVAADGA
                     ALSKPDYKAAGWHAIPRMPATVLQTLQEDGTYPDLYYGTNLGAVPQDLYQQDWWYRTT
                     FTAPAGHTTYQLEFPGINYRAEIWLNGHLIAGNTQIVGMHTAHELDVSRWVNQGEANA
                     LAVKITPERALQDVNGVELADSWYDWINWNYLGYQGPGKNPGNGNSFVPDRNAGIWKP
                     VYLKTSGAVALGQATVNSELPLPRTNSAKLTIYSSLRNASGQQVRGVLRATITRPGKP
                     ELALEQPVTLAAGEQREISFTPDKFSQLTVDNPDLWWPYTMGRPDLY"
BASE COUNT          221 a          384 c          355 g          185 t
ORIGIN      
        1 gacaccacgc tggagctggt gcgggaggtg ttggcgcgaa cagagcgacc gacaccaatt
       61 ccgttgcgct gcttgactga gcctgcaacc ggggctgcag gtacggtgat ccggtggacg
      121 gggagcagat gtcggtcgaa cgacgtcggc acatcgtctt gagaatcttg ctgtcgatgg
      181 cgctgttgct gctgctctgc gccgcggact tccccgattt cgcgaagccg gggccgccgc
      241 cgggccagat cgagctggca cagggctgga gcctggtctc cgctcgcaat gtggctgccg
      301 acggggccgc gctgtcgaag ccggactaca aggccgccgg ctggcacgcc atcccgcgga
      361 tgcccgcgac cgtgctgcag accctccaag aggacggcac gtaccccgac ctgtactacg
      421 gcaccaatct gggcgctgtc ccgcaggacc tttaccagca ggactggtgg tatcgcacca
      481 cattcactgc gcctgccggc cacaccacct accagttgga gtttcccggc atcaactacc
      541 gcgccgagat ctggctgaac ggccacctga tcgcgggcaa cacgcagatc gtcggcatgc
      601 acaccgccca cgaactcgac gtgtcgcggt gggtgaacca gggcgaggcc aacgcactgg
      661 ccgtgaagat caccccggag cgggcactgc aggacgtcaa cggcgtcgag ttggccgaca
      721 gctggtatga ctggatcaac tggaactacc tcggctacca aggaccggga aagaaccccg
      781 gcaacgggaa ttcctttgtc cccgaccgca atgcgggcat ctggaaaccc gtctacctca
      841 agacgtccgg cgctgttgcc ctcggccagg ccacggtcaa ttccgagttg ccgctaccac
      901 gaacgaattc cgccaagctg accatctaca gcagccttcg caatgcctct gggcaacagg
      961 tccgaggggt gctgcgggcg acgatcaccc gccccggcaa gcccgagctg gcactcgagc
     1021 agccggtcac tctagcggca ggtgagcagc gcgagatcag cttcactcca gataagttct
     1081 cgcagctgac tgtcgacaat ccggaccttt ggtggccgta caccatgggc agacccgacc
     1141 tctac
//
LOCUS       DASRPQ010001329         1055 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_779641, whole genome shotgun sequence.
ACCESSION   DASRPQ010001329 DASRPQ010000000
VERSION     DASRPQ010001329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_779641"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            78..617
                     /locus_tag="VFD73_15305"
     CDS             78..617
                     /locus_tag="VFD73_15305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75352.1"
                     /translation="MDTGSLARVAALLRERNAIDAKLAQLIHRPMTSGHLGEWIAAQV
                     FDIELEASAVAAGIDGRFRSGPLQGQTVNIKWYLKREGMLDTTESPAPDYYLVLTGPP
                     SAAASSAGATRPWCIEAVFLFEARQLRSEQITRGVRRGVASSVIRQQWAAAEIYPSAT
                     NPQLIVAPQKVEQLKLFAL"
     gene            complement(776..>1055)
                     /locus_tag="VFD73_15310"
     CDS             complement(776..>1055)
                     /locus_tag="VFD73_15310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014374930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS256 family transposase"
                     /protein_id="HZI75353.1"
                     /translation="QLGVPPTLARTLRSTNPIESMIEICRDHSKNVKRWRDGTMALRW
                     CAAGMLEAGHQFRRVNGHLHLPRLRAALEAHFTKNVTAVSQNEDQKVA"
BASE COUNT          171 a          316 c          359 g          209 t
ORIGIN      
        1 tcggaaggcc cgacccaact cactctcctc gcggcatgtg agtgcgcagt gcgacggtag
       61 atgggacact tctcgctgtg gatacgggtt ctctcgcgcg ggtcgcggcg ctgctgcgcg
      121 agcgtaatgc gattgacgcc aagctggccc agctcatcca tcggcctatg acatcgggtc
      181 atctcggtga gtggattgcc gcgcaggtct tcgacattga gctggaggca tcggccgttg
      241 ctgcaggcat cgatggccgc ttccgttcgg gcccattgca gggccagacc gtgaacatca
      301 agtggtatct caagcgcgaa ggcatgctgg acacaacgga gtccccggca ccggactact
      361 acctggttct taccggaccg ccgtcagcgg cggcgtcctc ggccggcgcc acccggccct
      421 ggtgtatcga agccgtattt ctgtttgagg cacggcaact ccgatccgag cagatcaccc
      481 ggggagtgag gcgtggagtt gcctcgagcg tcatcaggca gcagtgggca gctgctgaga
      541 tctacccctc ggcgactaat ccgcagctga tcgtagcccc gcagaaggta gagcagctga
      601 agctattcgc tctctgacgg caagcagctc ggtcggcggc agggggtgtg cttacaggaa
      661 tcgatgctgt gccggccagg aagcggctgg aatcggtttc cttgagcagc ctgccagact
      721 agatctgagg ttgtcccgag ttccgttgaa cttcggtgac ggtccccggt ggcccttagg
      781 ccaccttctg gtcctcattc tggcttacgg cggtgacatt cttggtgaag tgggcctcca
      841 gcgcggcgcg gagcctgggc aggtgcaggt ggccgttgac gcggcggaac tggtggccgg
      901 cttcgagcat cccggcggcg caccagcgca gcgccatggt gccgtcccgc catcgcttga
      961 cgttcttgga gtgatcccgg cagatttcga tcatcgattc gatcgggttg gtggagcgga
     1021 gggtgcgggc cagggtcggc ggcacgccca gctgc
//
LOCUS       DASRPQ010001330         1520 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2970043, whole genome shotgun sequence.
ACCESSION   DASRPQ010001330 DASRPQ010000000
VERSION     DASRPQ010001330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2970043"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..664)
                     /locus_tag="VFD73_15315"
     CDS             complement(<1..664)
                     /locus_tag="VFD73_15315"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+:solute symporter"
                     /protein_id="HZI75354.1"
                     /translation="MRLELSDWLIVALYFLASAGVALIFTRKASQSLDEYFVSGRALP
                     WWLAGTSMVATTFAADTPLVVSGLVAKYGVAGNWLWWNGALTGVLTVFFFARLWRRAG
                     VLTDLEFIELRYGGKPAAVLRAFRALYLAIPINLIIMGWVTLAMVTVLRISLDIQPWT
                     AAILLFGVTAAYTIFSGLWGVVVTDTFQFVVKMTGVIVLAVFAVNSVGGLDAMVQKSS
                     AHF"
     gene            complement(661..>1520)
                     /locus_tag="VFD73_15320"
     CDS             complement(661..>1520)
                     /locus_tag="VFD73_15320"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HZI75355.1"
                     /translation="LDAPVARYVPAFAGSSKERVTVRMLLTHSSGLPAWRPLFREISN
                     RDAAFALADSTPLEAPPGTRETYSDLGAIVLTQVVEAAYHERLDSLLERRLFQPLGMT
                     STRYLPPSEWRDRIAPTELDPWRGRVLRGEVHDENAAIMGGVSGHAGLFASANDLLTF
                     AEWILRQADGRIAGESDHGTTSASPTLRRSVLHEFTARQNLIPGSTRALGWDTPSPGS
                     SSGELLSPSSFGHTGFTGTSLWIDPERGVAIILLSNRVNPTRDNPRWAPIRGRIADLV
                     MTSALEVTQ"
BASE COUNT          314 a          463 c          505 g          238 t
ORIGIN      
        1 cgaagtgggc ggaggacttc tggaccatgg cgtccaggcc accaacggag tttaccgcaa
       61 acaccgccag cacgatgacc ccggtcattt tgacgacgaa ctggaaggtg tcggttacca
      121 ctacccccca gaggccggaa aagatggtgt atgcggcggt aactccgaag aggaggattg
      181 cggcagtcca gggttggata tcgagcgaga tccggagcac cgtcaccatc gccaaggtca
      241 cccagcccat gatgatgaga ttaatgggga tggccagata gagcgcgcgg aaagcccgaa
      301 gcacggctgc aggctttccg ccgtagcgga gctcgatgaa ctcgaggtcg gtgaggaccc
      361 cggcacgccg ccagaggcgg gcaaagaaga acaccgtcaa caccccggtc agcgccccgt
      421 tccaccacag ccagttgccg gcaacaccgt atttcgcgac caggcccgag accaccaacg
      481 gcgtgtccgc ggcaaaggtc gtggcgacca tggaggttcc ggcgagccac cagggaagcg
      541 ctcgcccgga gacgaagtac tcgtccagcg actgactcgc tttccgggtg aagatcaggg
      601 cgacgccggc cgaagcgagg aaatacagtg cgacgatcag ccagtcactg agctcgagtc
      661 tcattgagtg acctccaagg cgctggtcat caccagatcc gcgattctgc cacggattgg
      721 tgcccatcgg gggttgtcgc gggtggggtt gacccgattg ctcagcaaga tgatggccac
      781 gccacgctcc ggatcgatcc agagcgaggt gccggtgaat ccggtgtgcc cgaagctcga
      841 cggcgacagc agctcacccg agctacttcc gggtgatggt gtgtcccatc ccaacgcacg
      901 ggtcgagccg gggatgaggt tctggcgagc agtgaactcg tgcagaacgg agcgtcggag
      961 ggtcggagag gcggaggtgg tgccgtggtc cgactctccg gctatccggc catccgcctg
     1021 tcgcagaatc cattcggcaa aggtcagcag atcgttggcc gaggcgaaca ggccggcgtg
     1081 acccgacacc ccgcccataa tcgcggcatt ctcatcgtgc acctctcccc gcagcacccg
     1141 gccgcgccag ggatctagct cggtcggagc aattcggtct cgccactcgc tcggcgggag
     1201 atagcgggtg gaggtcatac cgagcggttg gaagagacgc cgctccagca gggagtccaa
     1261 acgctcgtgg tatgcggctt cgaccacctg agtcagcacg atggcaccga ggtccgaata
     1321 ggtctctcgg gttccgggtg gtgcctcgag cggagtgcta tcggccagag caaacgccgc
     1381 gtcgcggttc gagatttctc gaaagagcgg tcgccaggcg gggagtccgc tcgagtgagt
     1441 gagcagcatg cggacggtaa cacgctcttt actactcccg gcaaaggcgg gcacgtaccg
     1501 cgcaaccggc gcatcgagct
//
LOCUS       DASRPQ010001331         1101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1736998, whole genome shotgun sequence.
ACCESSION   DASRPQ010001331 DASRPQ010000000
VERSION     DASRPQ010001331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1736998"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..211
                     /locus_tag="VFD73_15325"
     CDS             <1..211
                     /locus_tag="VFD73_15325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75356.1"
                     /translation="DLSWDPAPPSRSARLIRWYLNHLLDLIPTDSEVASRFIQVQNMM
                     SGPTMLITPRMIAKVARQSLRRAPN"
     gene            410..>1101
                     /locus_tag="VFD73_15330"
     CDS             410..>1101
                     /locus_tag="VFD73_15330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75357.1"
                     /translation="MATRVVTVSDILDGHVGLDLECFDRIYLNGWVPNLQVPGQVVSF
                     LTRHLGFPIPSPAILEQIGLRFRKAVGAFAAENEIPLIRFGRGERKLEVMRPHLEGLV
                     RQRRTGVAAIGVAQEFQRVFTGTTYHPDEGGEGLPRFGYAKADRRVTAYYFYLVDEVF
                     GPAFIKVCAYFPYPIKIWLNGHEYAKRQAKAAGIAFTELDNGFAATEDPAGLQRICDM
                     LGSGTIRVFCER"
BASE COUNT          191 a          315 c          362 g          233 t
ORIGIN      
        1 cgacctttcc tgggacccgg cgccaccgag ccgctcggcc cgccttatcc gctggtacct
       61 caatcatctg ctggacctca taccgaccga ctcagaagta gcgagtcgtt ttatacaagt
      121 ccagaacatg atgagcggtc ccaccatgct gatcacaccc cgcatgatcg ctaaagtcgc
      181 ccgccagtcc ctacgtcgag cacctaacta gcgattatca ggaaccgcta ccggatggtg
      241 ctggttatga ccgaacactt catatgatca gtgcagatac ttcccgacgg tacgtgctaa
      301 agaggcttcg cctcggaccg ccgaggtggt ggctgggttg gtggatgacg ctgcggtgaa
      361 gtgaggccag gctggcggag ttgagttggc tgctgcctgg gggtgggcca tggcgacccg
      421 tgttgtgacc gtaagtgaca tcctcgacgg gcacgttggc ctggatttgg agtgcttcga
      481 ccggatctac ctcaacggct gggtgccgaa cttgcaggtg cctgggcagg tggtcagctt
      541 tttgacccgg catctggggt ttccgatccc gtctccggcg atcttggagc agatcgggtt
      601 gcggttccgc aaggcggtcg gtgctttcgc cgccgagaat gagatcccgc tgatccgttt
      661 cggcaggggc gagcggaagc tggaggtgat gcgcccgcac ctagaggggc tggtccgtca
      721 gcgacgcacc ggggtggccg cgatcggggt ggctcaggag ttccagcggg tgttcaccgg
      781 caccacttac catccggatg agggtggtga gggcctcccg cggtttggtt atgccaaggc
      841 tgaccgccgg gtcactgcct attacttcta tctggttgat gaggtcttcg ggccggcgtt
      901 catcaaggtg tgcgcgtatt tcccgtaccc gatcaagatc tggctcaacg gccacgaata
      961 cgccaagcgc caggcgaagg cagcgggtat cgccttcacc gagctggata acgggtttgc
     1021 tgccaccgag gatcctgccg ggttgcaacg gatctgcgac atgctgggat cgggcacgat
     1081 cagggtgttc tgcgagcgct g
//
LOCUS       DASRPQ010001332         1459 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2052761, whole genome shotgun sequence.
ACCESSION   DASRPQ010001332 DASRPQ010000000
VERSION     DASRPQ010001332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1459
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2052761"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            123..428
                     /locus_tag="VFD73_15335"
     CDS             123..428
                     /locus_tag="VFD73_15335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75358.1"
                     /translation="MPTSDSGAPHAAHPQFQELGVFVLAVIVGSLCGLATNQVLGRWV
                     SGAVAGNAALAVATTCTGAAHAHFVHKQPWLHLLPKVGLGAPLAYGVMRVVHAVLGS"
     gene            519..881
                     /locus_tag="VFD73_15340"
     CDS             519..881
                     /locus_tag="VFD73_15340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75359.1"
                     /translation="MTPTLVRRSFITFHLVLGIGLLALSVETLLHALAPANLATHKHI
                     AAIAGIEGVGALLFLIPRTLRLGAVLLLITVGGAFLMHGIRGEWRADLAIYTAGVWFV
                     LAHGSGWSQPTSASNVAP"
     gene            935..1381
                     /locus_tag="VFD73_15345"
     CDS             935..1381
                     /locus_tag="VFD73_15345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75360.1"
                     /translation="MPSLFDPKSREAILDRIGRLAPDRKPLWGRFTAPEMVCHVSCDL
                     RQSLGELETAPPSGPLTHAPLNWLVIHVVPWPKGKGKSPPEFLATRPTTWQADVSRLR
                     DLVRRFADRGPAAPWPPSRVFGRISGRSWGVMEHKHLDHHSRQFGV"
BASE COUNT          233 a          471 c          465 g          290 t
ORIGIN      
        1 cgtggttccg ttgctactca tcacgcacgg gctgatgttt gccgtgctga tgcgtcctga
       61 tgctacgccc caggttggcg gcccactcta tggaccctaa catccgacta tcacctgacc
      121 ttatgccaac ctcggattcc ggtgcgccgc acgcggctca cccgcagttc caggagctcg
      181 gtgtcttcgt actcgccgtg atcgtgggca gcctttgcgg gcttgccaca aaccaggtac
      241 tggggcgctg ggtcagcggt gccgtcgcgg ggaatgcagc cctcgcggtg gcaaccacat
      301 gtacaggggc cgcgcacgcg cacttcgttc acaagcagcc gtggctgcac ctgcttccga
      361 aggtcggact gggtgctcct ttagcttacg gcgtcatgcg agtggtgcac gccgtgctgg
      421 gttcgtgaag gcgagcgatc cgtgatgcgg gatcccgagc gagaaccgag cactagcgcc
      481 catccatcgg ttcgggtcca acgcccatct cgcgccctat gactccaacc ctcgttcgcc
      541 gatcgttcat cacgttccat ctcgtgctcg gaatcggcct gctcgcgttg agtgtcgaga
      601 cgctactcca cgccctggca ccggctaacc ttgccactca taagcacatc gcagccatcg
      661 cggggatcga gggggtgggc gctctcctct ttctcattcc gcgcacgctg cgtctagggg
      721 cagtgctgct cctgatcacg gtcggtgggg ccttcttgat gcacgggatt cgcggggagt
      781 ggcgtgcgga tctggcgatc tatacggcgg gtgtttggtt cgtcctcgct cacgggagcg
      841 ggtggtcgca gccgacttcc gcgtccaatg tggccccttg acttgcggtg gaagctggcg
      901 ggagttgagt ggaccacgct aaggaggagg ggcgatgcct tcactcttcg accccaagag
      961 ccgagaagcc atcctcgacc ggatcggccg cttggcgccg gatcgcaagc cgctctgggg
     1021 gcgcttcaca gcgccagaga tggtctgcca tgtgagctgc gatctgcggc aaagtctcgg
     1081 ggagctggag acggcgccgc cgtcaggccc cctgacccac gcgccgctca actggctggt
     1141 gatccacgtc gtaccgtggc ccaaggggaa gggaaaaagc ccgcccgagt ttctcgccac
     1201 gcgtcccacg acctggcagg cggacgtcag ccggctgcgc gatttggttc ggcgcttcgc
     1261 tgatcgagga ccggcggccc cctggccacc gagccgtgtc tttggccgaa tctcggggcg
     1321 cagctggggt gtgatggagc acaagcacct cgatcatcat tcacgccaat tcggagtgtg
     1381 atccgtaccg cccgatgttg atactcacca gcacgatcac gtgcccgttc tgtggcttcg
     1441 caaaacagga aacgatgcc
//
LOCUS       DASRPQ010001333         1077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3313332, whole genome shotgun sequence.
ACCESSION   DASRPQ010001333 DASRPQ010000000
VERSION     DASRPQ010001333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3313332"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..650)
                     /locus_tag="VFD73_15350"
     CDS             complement(<1..650)
                     /locus_tag="VFD73_15350"
                     /inference="COORDINATES: protein motif:HMM:NF013124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043531 - ADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NB-ARC domain-containing protein"
                     /protein_id="HZI75361.1"
                     /translation="MTSFIGRSGPVNEVAGLLDRYRLVTVTGPGGAGKTRLASEVAHL
                     VADRFADGVWLAELAAVRDPTLVVAEVAAALGVRDLPPAPLTEVLVRVLARRQLLLVL
                     DNCEHVIDAAARLCARLLPAADDLRVLATSREALRVAGEVRYRLRPLTLPEPDDLADA
                     AESEAVQLFADRAQRADTRFELDRETQPMVARLVARLDGMPLAIELAAARVEALGVA"
BASE COUNT          200 a          395 c          307 g          175 t
ORIGIN      
        1 gccacgccca gcgcctccac ccgtgccgcc gccagctcaa tcgccagagg catgccatcc
       61 agccgcgcta cgagccgcgc caccatcggc tgggtctccc tatccagctc gaaacgagtg
      121 tcagctcgct gggcccggtc cgcgaatagc tggaccgcct cagactcggc cgcgtcagcc
      181 agatcatccg gttcagggag ggtcaggggc cttagccggt atcgcacttc cccggccact
      241 cgaagcgcct ctctgctggt cgccagcacc cgcagatcat cggccgctgg tagcaaccgg
      301 gcgcacagcc tcgcggccgc atcgatcaca tgctcacaat tatccagcac caacaacagc
      361 tgtcgccggg ccagcacgcg caccagtacc tcggtcagcg gcgccggtgg cagatcacgc
      421 acccctagtg ccgccgcgac ctcagcgact actagcgtcg gatcacgtac ggccgccagc
      481 tctgccagcc acacgccgtc ggcgaatcgg tcagccacga gatgggccac ttcgcttgcc
      541 agccgggtct tgcccgctcc gcccggcccg gtcaccgtca cgagccggta ccgatccagc
      601 aggcctgcga cttcattcac cggtccagac cggccgatga agctcgtcat agcggccgga
      661 aatctatgta ggccaccctc cgtggtagcc gctgacagct ccacatccgt accataaccg
      721 tgtgcggcaa tcggcgtaca ggccgaccaa gccgccgggc cttacccaca ggaaggtaac
      781 gtcccgtaat accgtctcaa tcaagagcaa caggggaagc aataaccgca gggttccagc
      841 gtgttccaga cttatgggcg gtttgccggc atgtgcggtt gcagggcgga atcgcacagt
      901 tgcgagtacg gacatgtcac gtgaccatgt agatctctaa gggcacatcc tcgggccgga
      961 accgtctctt tacaccgggt cccggacgct acctgtcatc cggctgcctc cccatcgggc
     1021 ctagctgtga ctgccgcccg cagtgccgaa acctgatcgt ccgctgctgg ctcaggg
//
LOCUS       DASRPQ010001334         1318 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3919864, whole genome shotgun sequence.
ACCESSION   DASRPQ010001334 DASRPQ010000000
VERSION     DASRPQ010001334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1318
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3919864"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..438)
                     /locus_tag="VFD73_15355"
     CDS             complement(<1..438)
                     /locus_tag="VFD73_15355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75362.1"
                     /translation="MSTRRASWLAWSLAAAGLAMLAAGGALLAINLDMVGFNAAMIVL
                     FGSCAVIGALAVSRQPGNLVGWLFLATGVVAAMQIFTGELALSLYRHGGPLLAVQWLA
                     WPANWVWILPFGALFTLLPLLFPDGRLPSRRWRPLAWLALGLIA"
BASE COUNT          269 a          428 c          442 g          179 t
ORIGIN      
        1 ggcgatcaat cccaaggcga gccaggccag cggacgccac cggcgagacg ggaggcggcc
       61 gtcggggaac agcagaggca ggagcgtgaa aagagcccca aaggggagaa tccataccca
      121 gtttgccggc caggcgagcc actggacggc gagcagcggg ccgccgtggc ggtacaagga
      181 gagggcaagc tcgccggtga aaatttgcat cgccgcgacc actccggtgg ccaggaacag
      241 ccacccgacg aggttaccgg gctgccggga aacagccagc gcgccgatca ccgcgcacga
      301 accgaagagg acgatcatcg ccgcattgaa gccgaccatg tccaagttga tcgcgaggag
      361 cgcgcccccg gccgccagca tcgcgagtcc ggccgcggcc agcgaccagg caagccaaga
      421 cgctctccga gtactcatct cgctctcccg ggaccgccgg aaccgcgccc gccacgaccg
      481 ctacggccgt cttgtgtccg attcctaagg gctggcttgc acccacacta ggagggccgg
      541 gaaccagggc gccagggtgg tcccttacgt ttccatggtg tgcctaccac caccagttga
      601 cccagcttgt cgcgaccagg cgcgggaagc gatgacggaa ctggcagccg agaacctcag
      661 gcctcgatag aacacgtgag gctgaccacc gagatgattc acggtcacgc gcgggacaac
      721 cggcaatgcg cttgacccgg gcaagcgcac gacagccagc gctgggtgcg tgagtgcccg
      781 tgcccgctac gtgcccgacg ggaggagcgc ccgcgggtag tcacggtcac tcacggacag
      841 accatcgaga tctccacagg tcacagaatc agcaggtgat aggcgaacag cgccacagac
      901 ttcccaagct gacagtccga ttcgccgccg acttcggcgc ggcgggagac gtgagatatg
      961 aggcagcggc cgagcgggca caagcgcgtc gccgcaggtc gcaataatgg tctgcaaacc
     1021 actgcctccg aaaggggcct ccggctccgg gatgatcgtt agcgcaccat ccccgtgtgt
     1081 tgctggctgg tgtgaagcct gatcatcccg tctgccatcg acccgggaac gagcccagca
     1141 gaccatgcca agccggtcaa gatcgttcgt ccggcgggcg ctgcatcttg accggcttgg
     1201 cctggcccgc tccctaacgg gcgggtcgac ggcagacggg atgatcagca gggtaggggt
     1261 gcgctgaggg gctagcttga cagcatggct tcggacgagc ttgccgggtt tgttgatc
//
LOCUS       DASRPQ010001335         1213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3920065, whole genome shotgun sequence.
ACCESSION   DASRPQ010001335 DASRPQ010000000
VERSION     DASRPQ010001335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3920065"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            967..>1213
                     /locus_tag="VFD73_15360"
     CDS             967..>1213
                     /locus_tag="VFD73_15360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75363.1"
                     /translation="MSGEDLHYRARTDYPRVFGTSPTTKKPKAGGPPGIPWPTGGTER
                     HETTDGPPSPPPGRRRSVYDTTVLRPFGARDSSAITQR"
BASE COUNT          193 a          374 c          394 g          252 t
ORIGIN      
        1 gaagggccga gagatatctc gcctttcccg tctgggctcg gggtggccag gccccgctcc
       61 gagcccaggc ttctttgctg tctgaggcgt cttgcctgat cgctgccggg tgttccgcct
      121 ggcccggcgc ctgggtttgc acgcggggct agccagagca agcgcgaact gaccggcagg
      181 catgagctga ccggggcggg cgtgagagtg aacgcgggcc tgagcccgga cgcggacgca
      241 ctggatctgg gttttcactg cgctggaacg cactgcatcc ggggtttcat ggcgttccag
      301 cggctccgac ctccagtacg gtgatgctga tggtgtcggt gtgaactgag tccggttttc
      361 ttcgctggcc gtgtgactac cggcagcaga gtctgctggt atccagcgtt agcgtcgtac
      421 aatatattca gagttgccta ccagcccgtt ccgggccgtt gatggtcgca tcctttactt
      481 ctgactctcc cgtcaatttt cgccccgcct atgcgcgcgc agaacatgcg tagctttttt
      541 taacaatggc gtgcagcggg cggccgtaga tcattttccg cgaggcggaa tctcagcccg
      601 aggcgtgcaa cgacgcgatg cacatgcatc tgttcgtgca cagtactcga aagttaccat
      661 tcggtgaggg tgagccccat cctggccttg acgtgcgtta atgctgagcg gacccttctg
      721 atccgcagcg acaccccgcc ggacttggca tttttcgccc catacgcttc gttgcgaggg
      781 gtagagtcat gctcgtcgtc cagccctccg gcgggtcggc cagccagccg atactcggtc
      841 ttggacgggt cgcttgcggg gcggtcggcc gggcggcacg cggacggggc tctccagcga
      901 gatttggcgg gggaattccc ggcacttgcc gtggctgtgc tttcttcgct cgcgcgcgat
      961 agcggcgtga gcggcgaaga cctgcattac cgggctagga ctgattaccc gcgggtattc
     1021 ggtaccagcc cgacaaccaa gaagccgaaa gccggaggac cgcccggtat tccgtggccc
     1081 actggtggga cagaacgcca cgagacgacg gacggccctc cctctccacc tccgggaagg
     1141 agacgaagcg tgtacgacac tactgtcttg cgcccgttcg gcgcgaggga ttcctccgct
     1201 attacccagc gtg
//
LOCUS       DASRPQ010001336         5442 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3314405, whole genome shotgun sequence.
ACCESSION   DASRPQ010001336 DASRPQ010000000
VERSION     DASRPQ010001336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5442
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3314405"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..379)
                     /locus_tag="VFD73_15365"
     CDS             complement(158..379)
                     /locus_tag="VFD73_15365"
                     /inference="COORDINATES: protein motif:HMM:NF017353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HZI75364.1"
                     /translation="MAEKKDLATEGMKDRVKGAAKQAEGRIRSTVGSASGDTGEDLKG
                     KAQEFKGKVQEKFGRAEQNADSDPGDDEE"
     gene            complement(463..1470)
                     /locus_tag="VFD73_15370"
     CDS             complement(463..1470)
                     /locus_tag="VFD73_15370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HZI75365.1"
                     /translation="MSALLQVRDLVKYYQSGGLFARSAPPVRAVDGVSFEVAQGETLA
                     LVGESGCGKSSVGRTILRLQEPTRGKAIFDGVDVFALERDELRRLRRRMQIIFQDPYS
                     SLNPRMTIGAAIAEGIEIHRLAPKAEIPRRVAALLEEVGLDPGYARRYPHEFSGGQRQ
                     RIGIARALGVEPAFIVCDEPVSALDVSVQAQVLNLLGDLQRHRGLSYLFIAHDLAVVR
                     QIAHRIAVMYLGRIVEEGATDQLLSDPRHPYTVALLSAVPEPNPSVRRSRIVLRGDLP
                     SPSNPPPGCPFHTRCFHPMKNERCRVEVPLLRPVQLTMAACHYAESTPQPSEMAASLI
                     P"
     gene            complement(1467..2456)
                     /locus_tag="VFD73_15375"
     CDS             complement(1467..2456)
                     /locus_tag="VFD73_15375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI75366.1"
                     /translation="MTRVLEVQNLRISFPAGNQQRFYPVDGVSFSLDRGETLALVGES
                     GCGKSLTSLALLQLVPAPGRIEEGSVIRLGDTDVLALSGEALRQVRGRRIGMVFQDPM
                     TSLNPVFTVGDQIMEGILAHFKMPRSQARDRALQLLQEVGIPDPTSRLQAYPHQLSGG
                     MRQRVMIAIALSAEPEILVADEPTTALDVTVQAQILEVLDRLRASRGMAVLLITHDLG
                     IVAGRADRVAVMYAGQIVEETQTSRLFANPSHPYTQGLFASVPRLTGPLTRLTPIGGS
                     VPAPTAWPSGCRFRPRCPKSFEKSELEPPLLPVEPGHRMRCWLAEQPNGIHHK"
     gene            complement(2453..3283)
                     /locus_tag="VFD73_15380"
     CDS             complement(2453..3283)
                     /locus_tag="VFD73_15380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI75367.1"
                     /translation="MISTRHDLWSNPRGRIAATVLLLLVVAAVIGPTFLPDPLAQPDI
                     LAGSLPPGLGHPFGTDQLSRDVLARVVAGARISLSVALLAVTLSATIGAAVGLVAGYW
                     GGVVDAVLMRFVDGALAIPRLFILLLTLAVWERIPVTALVLMIGVTGWFATSRLVRGE
                     VLRLREESYVRAAEALGARRRRIIFRHLLPNALGPLLVASTLAVGDVILLEAGLSFLG
                     LGIQPPTPSWGGMILDSKEVLVSAPWTGIFPGLAILITVLSVNLFGDALRDALDPRWL
                     "
     gene            complement(3280..4251)
                     /locus_tag="VFD73_15385"
     CDS             complement(3280..4251)
                     /locus_tag="VFD73_15385"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI75368.1"
                     /translation="MRIWLARRILQALITFAIAVALLFFLMRSAPGDPLSRLGENRPL
                     SPREVAVLKSRYGLDQPVTIQFASFVRGLIHGDLGVSIEYGRPVNALLKERLPATLLL
                     GGSVLLLNFTVGLWLGVRQAVRYGKREDRWLTTLSLAGYAMPSFWLGLVLAWLVGIKW
                     HLLPAAGMEDPLLADNASPAVRGVDVLRHLILPMLTLSAVSIAATMRYQRAAMLEVLG
                     LPYIMTARAKGLLERKIIWHHAWRNALFPVITLFGLWLPILVTGSVFVESVFAWPGLG
                     SLAAAAVGGRDYPLLMGASLLVAGLVVAGGLLTDVAYAVLDPRVRLA"
     gene            complement(4248..>5442)
                     /locus_tag="VFD73_15390"
     CDS             complement(4248..>5442)
                     /locus_tag="VFD73_15390"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZI75369.1"
                     /translation="IIGVSAEGDRRVVFRFSHPYSEQLYDATFHVAPLPAHLLDTLPP
                     DAVARSSFVTQPVGSGPYRLVRNVPGQFVELAANQSFFLGKPGIQRVILRIAADPDAR
                     INLLLSGEGDALDNVIPPLDNLRRIGADSSIRLIPVPSPVVGFLLFNHRDPSDSSRPH
                     PILSDLRVRRAITLALDRPSLVRVVFGSYGEVPYGPVSPLLWIRHGAPKPARQNLAES
                     RRLLAAAGWRDSNGDGTLDRDGQPLALRLALPNTSAVRRQLSLLVQEQLRQLGIRVEL
                     NQLDFPVWIERRTAGKFDIDFASTSEDPSPSGLSQGWSCNGGTNVGRYCNPRVDSLIE
                     HAVLARRDPATAWHQVLQQIEADAPATFLYAPTFVYAVKRRFHNVTIMPASSWMQLRE
                     WSVGR"
BASE COUNT         1073 a         1717 c         1761 g          891 t
ORIGIN      
        1 gtgctgcagg tgagtgaatc gagagtttcc caaatccgga gccaggcatt gaagcggctg
       61 cgctcggagc tggcgacctc ggccaaagca agctgagccc aagaaaaacg ggactgggtt
      121 atgtccccag ccccggtatt catctcagga accaagtcta ctcttcgtca tctccaggat
      181 ccgagtcggc gttctgttcg gctcggccga acttttcctg gaccttgccc ttgaactcct
      241 gggccttccc cttgagatcc tctccggtgt caccggaagc actgccgaca gtgctgcgga
      301 tccggccttc cgcctgcttg gctgcgccct tcacgcggtc cttcatgcct tcggtcgcga
      361 ggtctttctt ctcagccatg atagtctcct ggcacgagta acaatcgcca tactttggtc
      421 tagcaacatt ggccggagac gcgggtggta ccgtgatggc gctcacggta taagggaggc
      481 tgccatttcc gagggttgcg gcgtgctctc ggcgtagtgg catgcggcca tcgtgagctg
      541 caccggtcgg agcagcggga cctcgacacg acaccgctca ttcttcatcg ggtggaagca
      601 gcgggtgtga aatgggcagc cgggaggcgg gttggagggg ctgggaagat ctcctcgcaa
      661 cacgatgcgc gaccggcgca ccgagggatt gggctcgggc actgctgaaa ggagcgcgac
      721 tgtatacgga tgccggggat cggagagcag ctgatcggta gcgccttctt ccacgatgcg
      781 tcccaaatac atcacggcga tgcggtgtgc gatctggcga accaccgcga ggtcgtgggc
      841 gatgaagagg taggagagac cacggtggcg ctggaggtct cccaaaaggt tcagtacctg
      901 ggcctgcact gagacatcca gcgcagagac gggctcgtcg cacacgatga acgccggctc
      961 cactccgagc gcacgggcga tcccgatccg ttgccgttga cctccggaaa attcgtgggg
     1021 gtaccgccgg gcgtatccag gatcgagccc cacttcctcc agcagcgctg ctacccgtcg
     1081 gggtatctcg gccttcggcg ccagccggtg aatttcgatt ccctcggcga tcgcggcgcc
     1141 gatcgtcatt ctgggattca gtgagctgta gggatcctgg aagatgatct gcatgcgccg
     1201 ccggagccgg cgcagctcgt cccgctcgag cgcaaataca tcgacgccgt cgaagatggc
     1261 tttgcctcga gtgggctcct gcagccggag aatggtccgt cccaccgacg acttaccgca
     1321 gcccgattcg cccaccaggg ccagagtctc tccctgggcc acctcgaacg agaccccatc
     1381 caccgcgcgc accggtgggg ccgagcgagc gaacaggccg ccgctctggt agtacttcac
     1441 cagatctcgt acctgcagca gggcgctcat ttgtggtgaa tgccgttggg ttgctccgcc
     1501 agccagcagc gcatccgatg cccgggctcg accggcagca gtggcggttc gagctcactc
     1561 ttctcgaacg atttgggaca gcgcggccga aagcgacagc cgctgggcca ggccgttggc
     1621 gccggcacgc tgcctccgat tggcgtaaga cgggtgagcg gaccggtcag gcgcggcact
     1681 gaggcaaaca gcccttgggt gtatgggtgc gaagggttgg cgaacagcct cgacgtctgg
     1741 gtctcttcca cgatctgacc ggcgtacatg acggcaactc ggtccgcgcg gcccgcaacg
     1801 atgcccagat cgtgagtgat gagaagaacg gccatccccc ggctcgcgcg cagccggtcc
     1861 agcacctcga ggatttgcgc ctgcacggtg acatccagcg cggtggtcgg ctcgtccgcc
     1921 accaggattt cgggctctgc tgacagcgcg atggcgatca tgacccgctg gcgcattcct
     1981 ccgctgagct gatgcgggta cgcctggaga cggctggtgg ggtcgggaat gccgacctcc
     2041 tgcaacaact gcaaggcgcg gtcgcgggcc tgtgatctgg gcatcttgaa gtgcgccaga
     2101 atcccttcca tgatctgatc gcccaccgtg aagaccgggt tcaggctggt catcgggtcc
     2161 tgaaacacca tcccgatgcg ccgcccgcgc acctgacgca atgcctcgcc gctgagcgcg
     2221 agcacgtcgg tatcacccag ccgaatgacg ctgccttctt cgattcgtcc tggtgcgggc
     2281 accagttgca ggagcgccag gctggtcaga ctcttcccgc agcctgattc gccgaccagc
     2341 gccagagttt cacctcggtc cagggagaag ctgacgccat ccactgggta aaatcgctgc
     2401 tgatttccgg cgggaaatga gatccgaagg ttctgcacct cgaggacccg ggtcatagcc
     2461 accgcggatc gagagcgtcg cggagggcgt ctccaaagag attgaccgac agcacggtta
     2521 tcagaatggc aagcccggga aagatcccgg tccagggcgc actgaccagg acttccttgg
     2581 aatcgaggat catgcctccc cacgatggag tgggtggctg gatgccgagc cccagaaagg
     2641 agagccccgc ctccagaagg atgacgtcac cgacggcgag cgtcgaagcg accagcaatg
     2701 gacccagagc attggggagc agatgccgga agataatcct gcggcgccgt gctcccagcg
     2761 cctctgccgc gcgaacgtaa ctctcctccc gcagtcggag cacctcaccc cgcaccagcc
     2821 ggctggtggc gaaccatcca gtgacgccga tcatcagcac gagggcagtg accgggattc
     2881 gttcccagac cgccagggtc aggaggagaa tgaacagtcg ggggatcgcc agcgcgccgt
     2941 cgacgaaccg catcagcacc gcatccacga ccccgcccca gtagcccgcc accagtccga
     3001 cggccgcacc gatggtcgcc gacaaggtca ccgccaacag ggcgacgctc aaggaaattc
     3061 gcgcgccggc cactacccgg gccagcacgt cgcggctcag ttgatcagtg ccgaacggat
     3121 gtcccaagcc aggcggcagg cttcccgcaa gaatgtccgg ctgcgcgagt ggatccggca
     3181 ggaaagtcgg accgatcacg gcggcgacga ccagcaggag cagtacggtg gctgcgatgc
     3241 gcccccgagg attgctccag agatcgtgcc gcgtcgagat cacgcgagcc gcacacgagg
     3301 atcgagaaca gcatacgcca cgtcggtcag cagacctccc gcgacgacca gtcctgcaac
     3361 cagcagcgat gcgcccatca gcagcggata gtcgcgcccc cccaccgcag cagccgcaag
     3421 ggagccgagg ccgggccagg cgaagaccga ctccacgaag acggagccgg tcaccaggat
     3481 ggggagccac agtccgaaga gcgtgatgac cggaaagagt gcgttccgcc acgcgtgatg
     3541 ccagatgatc ttgcgctcca gcaatccttt ggcccgtgcc gtcatgatgt agggcagtcc
     3601 aagaacctcg agcatggcgg cccgctgata gcgcatggtg gcggcgatgc tgacggcgga
     3661 aagcgtgagc atcggcagaa tcaaatgccg cagcacatcg acccctcgaa cggccggcga
     3721 ggcattgtcc gccaggagcg gatcttccat tcccgcggcg ggcagcagat gccacttgat
     3781 tcccaccaac caggcgagga ccaggccgag ccagaaggag ggcattgcgt agccggcaag
     3841 ggagagggtc gtgagccagc gatcttctct cttgccgtag cgcaccgcct ggcgaacgcc
     3901 gagccataaa ccgaccgtga aattgaggag aagcacactc ccgccgagca gcaacgttgc
     3961 ggggagtctc tccttcagta gtgcgttcac cgggcggccg tactcgatgg aaactccgag
     4021 gtctccatgg atgaggccac gaacgaaaga cgcgaactgg atcgtcaccg gctgatccaa
     4081 tccgtatcgg ctcttgagca ccgcgacttc cctgggtgag agcggccggt tctcacccag
     4141 tcgagacaac gggtctcccg gcgcgctccg catcaggaaa aagagcagcg caacagcgat
     4201 ggcaaaggtt atgagggcct ggaggattcg gcgggccagc caaatcctca tcggccaacc
     4261 gaccattccc gcaactgcat ccacgacgac gcgggcatga tggtcacgtt gtggaatcgg
     4321 cgctttactg cgtagacgaa agtcggggca tagaggaacg tggccggtgc gtcggcctcg
     4381 atctgctgca gcacctggtg ccatgccgtt gccgggtccc ggcgggcaag caccgcatgc
     4441 tcgatgagcg agtctacccg ggggttgcaa tacctcccga cattggtgcc gccgttgcag
     4501 ctccacccct gactcaaccc ggacggcgaa ggatcctcac tggtcgaggc aaagtcgatg
     4561 tcgaactttc ctgccgttct gcgctcgatc cacaccggaa agtccagctg attgagctcg
     4621 acccgaatgc cgagttgtcg taattgttcc tggaccagga gcgacagctg ccggcgcact
     4681 gcgctggtgt tcggcagagc tagtcggagc gccaacggct gcccgtcccg atcgagcgtt
     4741 ccatcgccgt tgctgtcccg ccagcctgcg gcagcgagca gccggcgcga ctcggccagg
     4801 ttttgtcgcg cgggcttggg cgcaccatgc ctgatccaga ggagcggcga gaccggtcca
     4861 taagggactt caccgtagga gccgaacacc acccgcacca gtgagggacg atccagtgcc
     4921 aatgtgatgg ctcggcgtac tctcagatcc gatagaatgg ggtgcggccg cgacgagtcg
     4981 gaaggatccc ggtgattgaa gagcagaaat ccgactactg gggacgggac gggaatgagc
     5041 cggatcgagg agtccgcacc gatgcggcgc agattgtcca gcgggggaat gacgttgtcc
     5101 agcgcatcgc cctctccgct caagagcaga tttattcggg cgtcgggatc ggcagcgatg
     5161 cgaaggatga cccgctggat gcccggcttt ccgagaaaga agctctggtt cgcggcaagc
     5221 tccacgaact gacccggaac gttgcggacc aaccgatagg ggccgcttcc caccggctga
     5281 gtgacaaatg aagagcgtgc gacagcgtcg ggcggcagtg tgtcgagcag gtgagccggg
     5341 aggggagcga cgtgaaaggt ggcgtcgtac agctgctcgg agtacggatg cgaaaagcgg
     5401 aacactaccc ggcggtcacc ctccgccgac acgccgatga tg
//
LOCUS       DASRPQ010001337         1032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3314431, whole genome shotgun sequence.
ACCESSION   DASRPQ010001337 DASRPQ010000000
VERSION     DASRPQ010001337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3314431"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..459)
                     /locus_tag="VFD73_15395"
     CDS             complement(<1..459)
                     /locus_tag="VFD73_15395"
                     /inference="COORDINATES: protein motif:HMM:NF015083.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxidase family protein"
                     /protein_id="HZI75370.1"
                     /translation="MVTTARSLNWLATVIARSAEHVDQTIGWFRLPRVLGLGVLVGLR
                     HQLRAQNLYDAGPVPDPGDDGPSDYLVARTRSGRHNDLGTPQMGALGCRFGRNVPPAH
                     QYPEPAAQLLEPNPRLISRKLLARTTFQPATTLNVLAAAWIQFEVHDWFSH"
     gene            848..>1032
                     /locus_tag="VFD73_15400"
     CDS             848..>1032
                     /locus_tag="VFD73_15400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75371.1"
                     /translation="MSPTDDSPATGGCPHRTYGQTFNDSGPADLVARAAIRRRGEREK
                     PMDEMDSIDGRPLFRLV"
BASE COUNT          185 a          312 c          346 g          189 t
ORIGIN      
        1 gtggctgaac cagtcgtgca cctcgaactg gatccacgcg gcggccagca cgttgagtgt
       61 ggtggctggt tgaaacgtgg tccgggcgag cagcttgcgg ctgatcaacc gcgggttggg
      121 ctccagcagc tgcgccgccg gttccggata ctggtgggcg ggcgggacgt tgcgcccgaa
      181 gcgacagccc agcgccccca tctgcggtgt acccagatcg ttgtgcctgc cgctgcgggt
      241 ccgggcgacg aggtagtcac tcggaccgtc gtcgcccggg tcgggcaccg gacccgcgtc
      301 gtagagattc tgggcacgca actggtggcg caggccgacc agtacgccga ggcccagcac
      361 tctcggcagc cggaaccaac cgatggtctg atccacgtgc tcggcggacc gggcgatcac
      421 ggtggccaac cagttcaggc tccgggccgt ggtcaccatg tgcgctgtgc cgatccatgc
      481 atgccttgat tgttgccata gcaacaggga aagggcatga gtagtccgct actcgatcct
      541 gcgacgactg cagtggtgcc ggacgactac ttgcgtgtgc aatggggtat ttcccttcga
      601 actggagtag tgcgccactc gtgtaacgca tatcagccgg tcgtacgttt ttcgtatagc
      661 cactgcgaac acggtgagga gaacaagatg ttcgtcacct ggaccgtccg agagttgggt
      721 cggccatgac tacgtggctg gccgcactgc cggtgatgtt gttgatcatc gccgtgctcg
      781 gcgtatacga cctgcagcgc tggctcgagc gctgggacca tgaccggcac ctgtcggatt
      841 gacctcgatg tccccgaccg acgacagccc agccaccggt ggctgcccgc accgaactta
      901 cgggcaaacc ttcaacgaca gcggtccggc cgacctggtt gcgcgcgcag caatccgcag
      961 gagaggtgaa agggagaaac caatggatga gatggacagc atcgacggca ggccgctgtt
     1021 ccgattggtg tt
//
LOCUS       DASRPQ010001338         2419 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1091151, whole genome shotgun sequence.
ACCESSION   DASRPQ010001338 DASRPQ010000000
VERSION     DASRPQ010001338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2419
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1091151"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..375)
                     /locus_tag="VFD73_15405"
     CDS             complement(<1..375)
                     /locus_tag="VFD73_15405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75372.1"
                     /translation="MRRIFTAILLLAGTAGCAAPRAAGAPLAPLGRSWAVPTLGLYQE
                     WWDKTVACSGKQGKMTDVNFYAVDAPGGAIELNGEMAHAWWVREGNRIYLPASALGEE
                     WLVRHEMLHALLQRGSHPTDVFV"
     gene            570..2120
                     /locus_tag="VFD73_15410"
     CDS             570..2120
                     /locus_tag="VFD73_15410"
                     /inference="COORDINATES: protein motif:HMM:TIGR00368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HZI75373.1"
                     /translation="MLARIRSAAILGIDAYPVDVEVDITNGLPSFSTVGLPNGAVKEG
                     RERVCAALANAGFAFPLRRITVNLAPADIRKDGSAFDLPIALGILVASGQLGDQGLSG
                     QMILGEVGLEGDLRPVRGALSMALAARASGCRGVLLPQANVPEASVVDGLDVCGARTL
                     QEACAHVSAQQRITPTRADISALMSSTGTDEADFIDVRSQAAAKRALEVAAAGSHNIL
                     LIGSPGAGKTMLARRLPSILPSMSLEESLETTKIHSVAGTLAAGRSLLTIRPFRAPHH
                     TISDAGLIGGGSSPRPGEVSLAHGGVLFLDELPEFRRNVLEVLRQPMEDGVVTLSRAA
                     VSLTYPARFMLAAAMNPCPCGYLGDHQHSCTCGSLMVARYRSRISGPLLDRIDIHLEV
                     PAVSYAELAAEPDEENSATIRARVEQARSVQRARFQGHRGVHANAHMTARDLKRYCRL
                     SASVESLLRQAVTRLGLSARAYHRILKIARTIADLAGSVELSTAHVSEAIQYRSLDRK
                     KEFASGIG"
     gene            2187..>2419
                     /locus_tag="VFD73_15415"
     CDS             2187..>2419
                     /locus_tag="VFD73_15415"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE1 domain-containing protein"
                     /protein_id="HZI75374.1"
                     /translation="MDPAPPEGRAPLQQTARYLLRLAALASVYYVAARLGLTYASIGQ
                     SVSLIWPPTGLAIAALTLLGYRYWPGVALGAFLA"
BASE COUNT          415 a          830 c          747 g          427 t
ORIGIN      
        1 tacgaagaca tcagtcgggt ggctgccgcg ctggagcagc gcgtggagca tctcgtgccg
       61 gaccagccac tcttccccta gagcactagc tggaagatag atccgattgc cctcccgtac
      121 ccaccaagcg tgagccatct cgccgttcag ctcgatcgcg cctccgggag catcgacagc
      181 atagaagttc acgtccgtca tctttccctg ttttccggag cacgcgacag tcttatccca
      241 ccactcctga tacaggccca aggtggggac tgcccaggaa cgaccgagag gcgccagcgg
      301 cgcgcctgcg gcccgcgggg cagcgcatcc agcggtcccg gccaacagaa gaattgcagt
      361 gaagatacga cgcatccgtg agctccaaat caagaatcca cttgacggcg gcgggctagg
      421 ggcgactccg ccatcgaggg tcaggtcagg tgggcgacgc acacccggcc gaaattgctg
      481 cacgattcgg tccacaccgg cacccggagg gtacccgaga ccgttccagc cggggctagg
      541 ttcgaaaaac ccttacctat cccgcccgca tgctcgcccg aatccgctcc gcagcgatcc
      601 tcgggatcga cgcgtacccc gtcgacgtcg aggtcgacat cacgaacggc cttccatcct
      661 tctctaccgt gggcctccct aacggggcgg taaaggaagg gcgagagcgg gtctgcgcgg
      721 cgctggccaa tgcgggcttt gcctttccac tgcgtcgcat cacggtcaac ctggctcccg
      781 cagacatccg gaaggatggt tcggccttcg atctgcccat tgcgctgggt atcctggtgg
      841 caagcggcca actgggcgac caggggctgt ccgggcagat gatcctcggc gaagtcggcc
      901 tcgagggaga tctccgtccg gtgcgcggcg cgctctctat ggcgctggcc gcgcgggcga
      961 gcggatgtcg cggtgttctg ctgcctcagg ccaacgtgcc ggaagcctcc gtggtcgacg
     1021 gcctcgatgt gtgcggcgct cgcaccctcc aggaagcctg cgctcacgtc tcggctcaac
     1081 agcgcatcac gcccactcgt gccgacatct ctgcgctgat gagctcgacc ggcaccgacg
     1141 aagccgactt catcgatgtc cggagtcagg ccgccgccaa gcgggcactc gaagtcgctg
     1201 ctgccggcag ccacaacatt ctgctgatcg gctcgcctgg agccggcaag accatgctgg
     1261 cgcggcggct gccgtcgatc ctgccatcta tgagtctcga agagtccctg gagaccacca
     1321 agatccacag tgtcgcgggc accctagcag cgggccgatc gctcctcacc attcggccgt
     1381 ttcgggctcc ccatcatacg atcagtgacg ccggccttat tggcggcggc tcgagtcccc
     1441 gtccgggaga ggtcagcctc gcgcatggcg gggtgttgtt cctggatgag cttcccgagt
     1501 tccgccggaa tgtcctcgag gtgctgcgcc aaccgatgga ggacggcgtg gtcaccctca
     1561 gtcgggccgc cgtcagcctg acctatcccg cccgattcat gctggcggcg gcaatgaacc
     1621 catgtccctg cggatatctg ggcgaccacc agcactcgtg cacctgcggc tcgctgatgg
     1681 tggctcgtta tcgctcgcgg atttccggcc cgctgctcga ccgcatcgac atccacctcg
     1741 aagttcccgc tgtgagctat gccgagctgg ccgccgaacc ggacgaggag aacagtgcca
     1801 ccatccgtgc gagggtcgaa caggctcggt cggtgcagcg cgctcgcttt cagggccacc
     1861 gtggcgtcca tgccaacgct cacatgaccg cacgggacct caaacgctat tgccggctca
     1921 gcgcgtcggt cgagtctctt cttcggcagg cagtcacccg attgggactg tctgcgaggg
     1981 cgtaccaccg gatcctcaag atcgcccgca cgatcgcaga cttggcggga tcggtcgaac
     2041 tctcgaccgc ccacgtcagc gaggcgattc agtatcggag cctggatcgg aaaaaggaat
     2101 ttgcctccgg aatcgggtga gcacaaccgg ccaggcgccg ccaaactgag tatgcttcaa
     2161 ctgctccccc tgcgacgcga tccgatatgg acccagcgcc acccgaaggc agagcgccgc
     2221 tgcagcagac tgctcgctac ctcctcaggc tggcggctct ggccagcgtc tactacgtcg
     2281 ccgcgcgatt gggtctcacc tatgcctcga tcgggcaaag tgtctcgctc atctggccgc
     2341 caaccggtct ggcaatcgcg gcgctcacgt tgctgggcta ccgctactgg cccggcgttg
     2401 cgctgggggc gtttctggc
//
LOCUS       DASRPQ010001339         1020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1740049, whole genome shotgun sequence.
ACCESSION   DASRPQ010001339 DASRPQ010000000
VERSION     DASRPQ010001339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1740049"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(181..>1020)
                     /locus_tag="VFD73_15420"
     CDS             complement(181..>1020)
                     /locus_tag="VFD73_15420"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: protein motif:HMM:NF013279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008955 - peptidoglycan
                     glycosyltransferase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HZI75375.1"
                     /translation="PFFNFQPSELGKVLLTLALAGFLVDRTRRLGEAENTARIMLLTV
                     IPAMLVIAQPDLGSGFVYIAIALALLFVAGTKWTHFAALGALGAAAVTAVLVLAPMAG
                     FHVIKQYQVDRLTAFAHPTDNPRKQGYQLKQSITAIGSGEKTGRGATGATQTKLDFIP
                     EHHTDFVFSVVGEEFGFVGAAIVLSLYALLIWRGLRILTMSKNLYGSLVAGGIVVMLM
                     FQVFVNVGMTVGIMPITGVPLPLMSYGGSSVIVTLLAIGLLQSIHVQAREIAQAKGRQ
                     TLL"
BASE COUNT          189 a          331 c          313 g          187 t
ORIGIN      
        1 gttgccgttc agctcctccc tcttcgggga ggccttcgag ccgccgcggc gcttgccggc
       61 ggccggcttc ttatcacccg tgtcgcccct aggtgagggg tccccctccg cctccaggat
      121 ggcgactcgg gtttcgccac ggtccaccgt gacgagtact cgttttctca agatttcctc
      181 tcatagaagt gtctgacggc ccttggcctg agcgatctct cgtgcctgca cgtggatcga
      241 ctgcaatagg ccgatggcca gcaatgtgac tatcacagag ctgccgccgt aactcattaa
      301 gggtaggggc acccccgtga tgggcatgat tcccacagtc atgcccacat tgacgaagac
      361 ctggaacatg agcatcacga cgatgcctcc cgccacaagg ctcccgtaaa ggttcttcga
      421 catggtgagg atacgcagcc ctctccatat gaggagggcg tacagcgata agacgattgc
      481 agcgcccacg aatccgaact cctcccccac cacggagaac acgaagtccg tgtggtgctc
      541 tgggatgaag tcgagcttgg tctgcgtcgc gcccgtcgcg ccgcgaccgg tcttctcacc
      601 ggagccgatc gcggtaattg actgcttgag ctggtaaccc tgcttgcgcg ggttgtcagt
      661 ggggtgcgcg aacgcggtga ggcggtccac ctggtactgc ttgatcacgt ggaacccggc
      721 catcggcgct aacacgagca ccgcggtcac agccgcggcc cccagcgcgc caagagccgc
      781 gaaatgggtc cacttggtgc ccgccacgaa caggagggcc agcgcgatcg cgatgtacac
      841 gaaaccgctt ccgaggtccg gctgggcgat caccagcatc gccgggatca ctgtgagaag
      901 catgatcctg gctgtgttct ccgcctcccc caggcggcgc gtgcgatcga ccaggaagcc
      961 ggccaaggcg agcgtgagca gcaccttgcc gagctccgac ggctggaagt tgaagaacgg
//
LOCUS       DASRPQ010001340         1782 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3920969, whole genome shotgun sequence.
ACCESSION   DASRPQ010001340 DASRPQ010000000
VERSION     DASRPQ010001340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3920969"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(156..1184)
                     /gene="trpS"
                     /locus_tag="VFD73_15425"
     CDS             complement(156..1184)
                     /gene="trpS"
                     /locus_tag="VFD73_15425"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HZI75376.1"
                     /translation="MSPANAESSAAPRETVLTGDRPTGPLHLGHFAGSLRTRLTLQHR
                     HDQTILIADLQALTDHAGRPVDVHRHVMELALDYLAVGIDPAATTIAVQSGIPELAEL
                     TVLYLNLVTVARLVRNPTVRDEIKLRGFGSAIPAGFLAYPVSQAADITAVRATLVPVG
                     DDQLPMIEQTNEIVRRLAYLAGRPVLPECRPILSDTPRLPGVDGRKASKSLGNAIPLS
                     AEPDEVHAKVRAMFTDPEHLRADDPGRIEGNVVFAYLDAFDPDQAEVEELKQRYRAGG
                     LGDVSLKQRLEDVLESLLAPIRKRRREFAEDPGAIESLLRTGTARTRKTAASVLRDVR
                     AVFALDSP"
     gene            1238..1624
                     /locus_tag="VFD73_15430"
     CDS             1238..1624
                     /locus_tag="VFD73_15430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016627252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HZI75377.1"
                     /translation="MATRQRDRERQGEAVFLKRAYEPPASGDGQRFLVERLWPRGVRK
                     AGLRLDGWLKEVAPSPELRRWFSHDPAKWATFKRRYFEELRAHESALTPLRQAARRGP
                     VTLVYGARDTEHNAAVALREYLKRVS"
BASE COUNT          315 a          536 c          605 g          326 t
ORIGIN      
        1 ggcgatcaag aacaacgagc tcagggcgtt ggtggtgaag gtgacccctg cattccaggc
       61 gcacctgacg atggcggaga acctcctcac cagggtggcc acaaagtgat gggcaaaagg
      121 agggctgcgg gagatcagcc ccggtcccgg agccgctacg gcgagtcgag ggcaaacacc
      181 gcccgaacgt cccggagcac actagcggcg gttttccgcg tccgcgccgt cccggtgcgc
      241 aagagcgact cgatcgcgcc gggatcttca gcgaactcgc gcctccgctt tcgtatgggg
      301 gcaagtagtg actcgagaac gtcctcgagt cgctgcttga gcgagacgtc ccctaggcct
      361 ccggcccggt aacgctgctt gagctcctcg acctctgcct ggtctgggtc gaaggcgtcg
      421 aggtaggcaa agacgacatt gccttcaatg cggccggggt cgtccgctcg caggtgttcg
      481 gggtcagtaa acatcgcccg caccttcgcg tgaacttcat cgggctcggc gctcagcggt
      541 atggcattgc cgagcgactt gctggcctta cgcccatcta ccccagggag gcggggcgtg
      601 tcggagagta tgggccggca ttcgggcagc acgggacgac ccgccaggta cgcgagtcgc
      661 cgaacgatct cattagtctg ctcgatcatc gggagttgat cgtcgccgac cggcacgagc
      721 gtcgcacgca ctgcggtgat atcagctgcc tggctcacgg ggtaggcgag aaagccagca
      781 gggatggcgc ttccgaagcc cctgagcttg atctcatctc ggaccgtggg gttacgcacc
      841 agacgcgcaa ccgtcaccag gttcaggtag agcaccgtga gttcggcgag ctccgggatc
      901 ccggactgga cagcgatggt ggtcgctgcc gggtcgatgc cgacagcgag gtagtcgagc
      961 gcgagctcca tcacatgccg gtggacatcg accggccggc cggcgtgatc ggtgagcgcc
     1021 tggaggtcgg cgatgagaat ggtctggtcg tgccggtgtt gcagggtcag acgcgtgcgc
     1081 agcgagccgg cgaagtgtcc caggtggagg ggtcccgtgg gacgatctcc cgtgagcact
     1141 gtctcgcgag gtgcagccga ggactctgcg tttgctggtg acacaccggg ctcctgacct
     1201 gcatctggtt accgcagcag aaacgctagg agagaaaatg gcaacgagac aacgagaccg
     1261 ggagcggcag ggtgaagccg tgttcctgaa gcgagcgtat gagccaccgg catccggtga
     1321 tgggcagcga tttctggtgg agcggctgtg gccccgtggt gtgcgaaagg ctgggctccg
     1381 tctcgatggc tggctcaagg aggtggcgcc cagtccggag cttcggcggt ggttcagcca
     1441 cgatccagcc aagtgggcga cgttcaagcg gaggtacttc gaggagcttc gtgctcatga
     1501 gtcggcgctc acgcctctgc ggcaggctgc ccgtcgcggc cctgttacac tggtctatgg
     1561 ggcccgggac actgaacaca acgccgctgt ggcgctccgc gagtatctca agcgagtttc
     1621 ctgaaccggg taacctttga acgtaatcgt cctggttatg acttccatcg gatccccgtt
     1681 aacgagtcgc tgatctctgt cgtgacgcaa ctttactccc ttgaggttcc gcttccctac
     1741 cggctcgatc tcactgtcaa cgtcctgcgc cggctgtcca cc
//
LOCUS       DASRPQ010001341         1937 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2055600, whole genome shotgun sequence.
ACCESSION   DASRPQ010001341 DASRPQ010000000
VERSION     DASRPQ010001341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1937
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2055600"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1654
                     /locus_tag="VFD73_15435"
     CDS             <1..1654
                     /locus_tag="VFD73_15435"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HZI75378.1"
                     /translation="DRGFGWLFRPFNRAFSRGSAGYSSAVNRVLGRKGLVLATYAGLI
                     ALTLVGFSKVPKGFVPTQDKQYLVAFAQLPDGATLDRTEKVIRQMSEIGIKQPGVENA
                     VQFPGLSINGFVNAPNAGIVFFALKPFDERHGKEQYGLNIAGALNGKFAGIQDAFVAV
                     FPPPPVNGLGQVGGFKLELEDRAGLGESALNEATQAVIGKAYQTPALAGVFSGYRVNV
                     PQLEVEVDREKVKREGIVLTDLFQTMQAYLGSVYVNDFNKFGRTYQVKVQADAQFRAP
                     ADNIAQLKVRNAAGAMIPLGSVVQVKQSHGPDQSTRYNGYPAADINGGPAPGFSSGQA
                     QEAIEGILHDVLPNGIGYEWTDLTYQQKLAGSTAVFIFPLCVLLVLLVLAAQYESWTL
                     PLAVILIVPMSLLCAIGGVWLTKGDNNIFTQIGFLVLIGLACKNAILIVEFARELHLQ
                     GRSVIESALEATRIRLRPILMTSFAFIMGVLPLVFSSGAGAEMRHAMGVAVFSGMLGV
                     TFFGLVLTPVFYVVLQGLLERRAHRARQFVVQPAHDEESKHA"
     gene            1647..>1937
                     /locus_tag="VFD73_15440"
     CDS             1647..>1937
                     /locus_tag="VFD73_15440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75379.1"
                     /translation="MHKSVALFWLALTAAGCASAPAYRPPEVQVPAAFRETRDTGLTV
                     AGTPSDTAQLVKWPDLGDTTLVRLVDQLGKANLDVQAAVERVRGARAARTETA"
BASE COUNT          328 a          596 c          656 g          357 t
ORIGIN      
        1 cgaccgcgga ttcggctggc tgttccggcc gttcaaccgg gccttcagcc gaggctccgc
       61 cggatacagt tcggcagtga accgggtact gggccggaag ggactggtgc tcgccaccta
      121 tgccggactg atcgcgctga cgctcgtcgg cttctccaag gtgccgaagg ggtttgtgcc
      181 gacccaggac aaacagtatc tcgttgcctt tgcccagctg cccgatgggg caacgttgga
      241 tcgcaccgag aaagtcatcc ggcagatgtc ggagatcggg atcaagcagc cgggggtcga
      301 gaacgcggtg cagttccccg gtctctcgat caacggcttc gtcaacgcgc ccaacgccgg
      361 catcgtcttc tttgcgctca agccgttcga tgagcggcat gggaaggagc agtacggcct
      421 caacatcgcc ggcgcgctga atggcaaatt cgccggcatt caggacgcgt tcgttgcggt
      481 gtttcccccg ccaccggtga acgggctggg gcaggtgggt gggttcaaac tggaattgga
      541 ggatcgcgcg ggactgggag agtcggcgct caacgaggcc acccaggcgg tgatcgggaa
      601 ggcatatcag acccccgcat tggccggtgt gttcagcggc taccgggtca acgtgccgca
      661 gctcgaggtc gaggtcgatc gggagaaggt gaagcgcgaa ggcatcgtac tcaccgacct
      721 gttccagacc atgcaggcct atctcggatc ggtctacgtc aacgacttca acaagttcgg
      781 ccgcacctat caggtgaagg tgcaggcgga cgcgcagttc cgcgcccccg cggacaacat
      841 cgcgcagctc aaggtcagga acgcggcagg cgcgatgata ccgctcggct cggtggtgca
      901 agtgaagcag tcgcacggcc ccgatcagag cacccggtat aacggatatc cggctgccga
      961 tatcaacggc gggccggcac cgggattcag ctcgggccag gcgcaggagg ccatcgaggg
     1021 catcctccat gacgtgctgc ccaacggcat cggctacgag tggaccgacc tgacctatca
     1081 gcagaagctc gcgggcagta cggcggtatt catctttccc ctctgcgtcc tgctggtcct
     1141 cctggtcctc gcggcgcagt acgagagctg gacgctgccg ctcgcggtca tcctgatcgt
     1201 tccgatgtcg ctgctctgcg ccatcggcgg cgtgtggctg accaaaggcg acaacaacat
     1261 cttcacccag atcggattcc tggtgctgat cggactggcc tgcaagaacg cgattctgat
     1321 cgtcgagttt gcccgagagc tgcacctgca ggggcggtcg gtgatcgaat ccgccctcga
     1381 ggcaacccgc atccggcttc gtcccattct gatgacctcg tttgcgttca tcatgggcgt
     1441 gctcccgctg gtgttctcca gcggcgcggg cgccgagatg cggcatgcga tgggggtggc
     1501 cgtgttctcc ggaatgctcg gcgtcacgtt cttcggtctg gtgctcacgc cggtgttcta
     1561 tgtggttctg cagggcttac tggagcggcg cgcccaccgg gctcggcagt tcgtggtgca
     1621 gccggctcac gatgaggaat ccaaacatgc ataagtccgt cgctctgttc tggctggcat
     1681 tgaccgcggc gggctgcgcg tcggcgccgg cgtatcgccc gccggaggtg caggttccgg
     1741 cggcgttcag agagacccgc gacaccgggc tgactgttgc cggaacgccg tccgacaccg
     1801 cccaactggt gaagtggccc gatctgggtg ataccacgct ggtgcggctg gtggatcagc
     1861 tgggcaaggc caatctcgat gtgcaggcgg cggtcgagcg ggtgcggggt gcgcgggccg
     1921 cccggaccga aacagct
//
LOCUS       DASRPQ010001342         1368 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1419613, whole genome shotgun sequence.
ACCESSION   DASRPQ010001342 DASRPQ010000000
VERSION     DASRPQ010001342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1368
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1419613"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..267)
                     /locus_tag="VFD73_15445"
     CDS             complement(<1..267)
                     /locus_tag="VFD73_15445"
                     /inference="COORDINATES: protein motif:HMM:NF025033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HZI75380.1"
                     /translation="MTKEMPDNQAEHTLRTRDAYDRLAAVWSSTTDDGPFNGFLERPA
                     LRALVPGDLHGAAVLDAGCGSGAQAQWLLEQGADIVAVDVSPRMI"
     gene            complement(390..983)
                     /locus_tag="VFD73_15450"
     CDS             complement(390..983)
                     /locus_tag="VFD73_15450"
                     /inference="COORDINATES: protein motif:HMM:NF019142.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G5 domain-containing protein"
                     /protein_id="HZI75381.1"
                     /translation="MEEAMRPAIKITLAVSILLVISACTSEATPTATATRATIVPATA
                     SATPSAVSSTPVQAAPVVKKRIVTSRRAIPFKTMRVNDSALSKGSTRVRNPGARGVEI
                     LTYKVTLRNGIQTHKELVKKVIVRAPVTRVVAVGTKETQQCDPNYSGACVPIASDVDC
                     AGGSGNGPAYVQGPVQVIGTDIYGLDRDGDGIGCEDG"
BASE COUNT          232 a          443 c          412 g          281 t
ORIGIN      
        1 gatcatccgg ggactgacgt cgacggcgac gatatcggcg ccctgttcca gcagccactg
       61 tgcctgcgct ccggatccgc agccggcatc cagcactgcg gcaccgtgca agtcgccggg
      121 taccagcgcc ctgagagcag gccgctccag gaatccgtta aatggcccgt cgtcggtggt
      181 cgatgaccac actgccgcca gccggtcgta tgcatcgcgg gttcgcagcg tgtgctcagc
      241 ttggttgtcc ggcatctcct tggtcaccgg cagagcctag ccagaaccgt cataacgggc
      301 cagtatcgac tgctacgccc atttgccgcg actgccgatc tgactgccct cgttgtcagg
      361 ccggccttca tcttaacgac tgcgcaggtt cagccatcct cgcagccgat accgtcgccg
      421 tcgcgatcga gtccgtagat gtccgttccg atcacctgaa cgggtccctg gacgtaggcg
      481 gggccattgc cgctgccgcc tgcgcagtcg acgtcgctgg cgatcggcac acaggcaccg
      541 ctgtagttcg ggtcgcactg ctgggtttcc ttggttccga ccgcgacgac ccgggtgacc
      601 ggcgccctga cgatcacctt tttcaccagc tctttgtggg tctgaatccc gttgcggagc
      661 gtcaccttat acgtgaggat ctctacccct cgggcgccag gatttctcac cctggtgctg
      721 cccttggaaa gcgccgaatc attcactctc atcgtcttga acgggatagc ccgcctgcta
      781 gtaacgatac gcttcttcac tactggggcg gcttgcaccg gcgtgcttga cacagcggaa
      841 ggcgttgcgg acgcggtcgc tggcactatc gtggctcgtg tggctgttgc tgtcggcgta
      901 gcttctgacg tacaggcgct aattaccagc aggatgctga ccgctaatgt gatcttaatg
      961 gcaggtctca tggcttcctc cataccgcaa cgtcacttta ccagtcagac ctttggtcaa
     1021 cacggccatt ggccgctagc cgtaagtaac gatagtcccg cctcgattgg ctcgtgcctg
     1081 cgccgattag gtttacccgg ccgggctcag tcccgccaga agatccacgt cggcgaattg
     1141 atcaggcccg ctgtgatcgc ggagatatag cgcagcccaa aaccgggtct agcggtccgg
     1201 cggttccggt tcggccatct cagccaccct gcggaaggcc agagagcaca cgagacctgc
     1261 gcttttgagt ggatataccg gcgacgtcct cgcgatcgat gtcagcgcag gatgctccag
     1321 tgggccaagc gcagggggag cgcggaccgg cggccgcatc caggggag
//
LOCUS       DASRPQ010001343         1983 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1419897, whole genome shotgun sequence.
ACCESSION   DASRPQ010001343 DASRPQ010000000
VERSION     DASRPQ010001343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1983
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1419897"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..655
                     /locus_tag="VFD73_15455"
     CDS             <1..655
                     /locus_tag="VFD73_15455"
                     /inference="COORDINATES: protein motif:HMM:NF015658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF305 domain-containing protein"
                     /protein_id="HZI75382.1"
                     /translation="HSSSIAALLMAFIWGGCSRSSQNRSPQPSPQKASHQQRSSSAAT
                     QKTATGQYPFTAADVHFMSGMIGHHAQALVMAGWAPSHGASPAIRTLCERIINGQQDE
                     IATMQRWLKDRGLPVPDATPMKMDMGSMNHELMPGMLTDEQMKDLDQARGPEFDRKFL
                     TYMIQHHRGAITMVQQLFATKGAAQDEATFKMANDISADQTTEVDRMQRMLDSLPPA"
     gene            766..>1983
                     /locus_tag="VFD73_15460"
     CDS             766..>1983
                     /locus_tag="VFD73_15460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75383.1"
                     /translation="MAAARLVSLSVAIGLISLAGCSHSTSSSSSSAPSPKPDMSTKPP
                     SPDPRVGLRAGKMDAQEAIWNLRKMSNTPPSEQFVDVTNSDLAFTGKYAIQGNYHGWQ
                     VWDISNPSKPSLTVGYVCPASQSDVSVYKNLLFVSGENLAARLDCGTEGVQDTVSTER
                     LRGLRIFDISDIAHPKNVGNVQTCRGSHTHTLLVDPKDQENVYIYISGSAPVRSSKEL
                     PGCVAAMPSKDPNSAWFRIEVIKVPLAHPEQAKIVSSPRIFDNLVAPPKHGETPADSA
                     AHAKEIADAKAQGKFTAMIPGYGEIVLHDEDTQALLDSIVSHRHGTGAPTAQDSAALR
                     DTIPTLIKQMMGQQPDSGSGPTQCHDITVYPAIGLAGGACAGYGLLLDIADPAHPKRI
                     GAVSDSNFSYWHSA"
BASE COUNT          419 a          669 c          574 g          321 t
ORIGIN      
        1 acacagtagc agcatcgcgg ctctcctgat ggctttcatc tggggtgggt gtagcaggag
       61 cagccagaac cgctcgcccc agccatcacc gcagaaggcg tcccaccagc agagaagcag
      121 cagcgcagcc acccagaaga cagccaccgg ccaatacccc tttaccgctg cggacgtgca
      181 cttcatgtcc ggaatgatcg ggcatcacgc tcaggcactg gtgatggcgg ggtgggcacc
      241 gagtcatggc gcgagccccg ccatccggac cctgtgcgag cggatcatca acggccagca
      301 ggacgagatt gccaccatgc agcgctggct caaagatcgg ggactgccgg tgccggacgc
      361 cacgcccatg aagatggaca tgggatcgat gaaccacgag ctgatgcctg gtatgctgac
      421 ggacgagcag atgaaggacc tcgaccaggc ccgcggcccg gagttcgatc gaaagttcct
      481 gacctacatg atccagcacc atcgtggcgc catcaccatg gtgcagcagc tctttgcgac
      541 caaaggcgcg gcccaggatg aggccacatt caaaatggcc aatgacatca gcgccgatca
      601 gaccaccgag gtcgaccgga tgcagcggat gcttgactcc ttgccgccgg cgtgaaacca
      661 gtgaaacgtg tgttccgtag gcaccgtcgt gtagtcaccg gataccggcc gttagctagc
      721 ggccgatccg tcattcgttg ctgatccccc cacaaggaac ccagaatggc agccgccaga
      781 ctcgtctctc tgtccgttgc gatcggcctc atctcgcttg cggggtgtag ccactcgacc
      841 tcctcctcca gcagcagcgc gccctctccc aaacctgaca tgtccaccaa gccgccgagc
      901 cccgatcccc gggtagggct gcgcgcgggg aagatggatg ctcaggaggc gatctggaac
      961 ctgcggaaga tgtcgaacac gccaccttca gaacagttcg tggacgtcac caactccgat
     1021 ctggcattca ccggcaagta cgccatccag ggtaactacc acggctggca ggtgtgggac
     1081 atcagcaacc cctcgaagcc cagcttgacg gtggggtacg tttgccccgc ctcccagagt
     1141 gacgtctcag tctacaaaaa cctgctcttc gtctcgggcg agaacctcgc tgcccgcctc
     1201 gactgcggga ccgaaggggt gcaggacacc gtgagcaccg agcggctccg gggacttcgc
     1261 atcttcgaca tcagcgacat cgcccatccc aaaaacgtcg gcaatgtcca gacctgccga
     1321 ggctcccata cccacacgct cctggtcgac cccaaggacc aggagaacgt ctacatctat
     1381 atctcggggt cggccccggt tcgctcgtcc aaagagctgc ccggatgtgt cgccgctatg
     1441 ccctcgaagg accccaactc cgcatggttc cggatcgagg tcatcaaggt tccactggct
     1501 catcccgagc aggccaagat cgtgagctcg ccgcggatct tcgacaatct cgtggcccca
     1561 cccaagcacg gcgagacccc ggcagacagc gccgcgcacg ccaaggaaat cgcggatgcc
     1621 aaggcgcagg ggaaattcac tgccatgatt ccgggctacg gcgaaatcgt cctgcatgac
     1681 gaagacactc aggcattgct cgacagcatc gtcagtcacc gacatggcac cggagcaccc
     1741 accgcgcagg acagcgccgc gctgcgcgat acgattccga cgctgatcaa gcagatgatg
     1801 gggcagcagc cggacagtgg aagtggtccc acgcagtgcc acgacatcac cgtttatccg
     1861 gcgatcggtt tggccggggg agcctgcgcc ggatacggcc tgctgctgga tattgccgac
     1921 ccggcccacc ccaaacggat cggcgccgtt tccgattcca acttctccta ctggcactcg
     1981 gcc
//
LOCUS       DASRPQ010001344         1740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1091968, whole genome shotgun sequence.
ACCESSION   DASRPQ010001344 DASRPQ010000000
VERSION     DASRPQ010001344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1091968"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(719..1444)
                     /locus_tag="VFD73_15465"
     CDS             complement(719..1444)
                     /locus_tag="VFD73_15465"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF and ANTAR domain-containing protein"
                     /protein_id="HZI75384.1"
                     /translation="MGATDADDIKEVIAQTFVAIGTLARALHVEDARLQPTLDAITAH
                     AAAAHPAAQDAGLILLIGGKLIPQATTGKAPQLLDIKQQKTGQGPCIEAAREQTLICL
                     NDLQQDPRWPEFSAEAQAWGVSSMLCAPLWINQRTLGALSLYAAQPRAFSEHDERIVE
                     LFATLAALALAEAQRTDHLRAALVHRDVIGQAKGIIMERYKISPDAAFSTLARISQGQ
                     NIKLHQVARQIVETGQLPDATEH"
BASE COUNT          318 a          558 c          570 g          294 t
ORIGIN      
        1 atgatcgtcg atcagcacat acagtgccgt caggagggtg tcgaggtctg cagtcacgag
       61 cgaccatcga tgccctcctc cctttccacg atcaacctgc cacgccgcac cggcccgggt
      121 taggaatcac tcgtctagac cgaggctgcc gggaccacca cgagaagaag gaaaccacga
      181 tgagtgcaca ggacaaggcc aaaagcgccg ccgagaaggg caccggcaaa ttaaggaaca
      241 actcgggaaa gcgaccgacg acaaatccct cgaagccgaa ggccagagcg atcaggccaa
      301 aggcaacctc aaagacgccg gcgaaaaggt caaagacgcc ttcaaaagta acgcccgcat
      361 ccaggtcgcg tcaccaacga gaaccggatc cgtcctcccg gccacccata cgcgctcgct
      421 accgggacag gtgcttccgc tggtcaggtg gcacgtaccc tcacctgcgc cgaccggcgg
      481 gtaagcaccc gtcccggaag ctgccgcgcc cttcagtctg cggcgacaga tgcggacatg
      541 gatgtggtga ccatggggca cctcctgggc cgggctgagg ccagggaagg ctgggcccgc
      601 cgtggcccag tgacgatact tcacctcagc ggtcgctgtg gccggcggtg ccggcctcgg
      661 cgcgacgtga cccccggctc cccgcaccct acgaatccct acacacgcgc cggatggctt
      721 agtgctctgt tgcgtcgggg agttgtccgg tctcgacgat ctggcgggcg acctggtgaa
      781 gcttgatgtt ctggccctgc gagatgcggg cgagtgtgct gaaggcggca tctgggctga
      841 tcttgtaccg ctccatgatg atgcctttgg cctggccgat aacatcgcgg tgaaccaggg
      901 cggccctgag atggtcggtt cgctgggcct cagccagcgc cagcgcggcc agcgtcgcga
      961 acagttcaac gatccgttcg tcatgctcgc tgaaagctcg tggctgcgcg gcgtacaggg
     1021 agagcgcccc cagggttcgc tggttgatcc acagcggcgc gcagagcatg ctgctgaccc
     1081 cccacgcttg tgcctcggct gagaactcgg gccagcgtgg atcctgctgc aggtcgttca
     1141 ggcagatcag ggtttgttcc cgcgccgcct cgatgcaggg gccctgtcct gttttttgct
     1201 gttttatgtc caggagctgg ggggctttcc cggtggtggc ctgggggatg agttttccgc
     1261 cgatcagcag gatcagccct gcgtcctggg ccgccgggtg agcggcggcc gcgtgggcgg
     1321 tgatggcatc gagtgtgggc tgcaggcggg cgtcttcgac gtgcagcgca cgggcgagag
     1381 tgccgatggc aacgaacgtc tgggcgatga cttctttgat gtcatctgcg tctgtggcgc
     1441 ccaccacggt cctccaaccc tggctgacga gtgccctgat cggctggccg tcaaaattct
     1501 aggctgacac gcatagctgg ctcatcagcg ggcagcgtcc cggccagggt caaacagcgg
     1561 ccccacagca cagcccgcag cacccggccg aaccataggc gtgactgcgg gcccagcagg
     1621 aaagtgaggc cgctgctgat gttcaggcac acctctcgct tgcagttcga gtccaagccc
     1681 gacaagcccg acccggtgta tgcgcacaag ctgcaggagc tgatcggcgg cgcctacggc
//
LOCUS       DASRPQ010001345         3962 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3620525, whole genome shotgun sequence.
ACCESSION   DASRPQ010001345 DASRPQ010000000
VERSION     DASRPQ010001345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3962
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3620525"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..893
                     /gene="fhcD"
                     /locus_tag="VFD73_15470"
     CDS             <1..893
                     /gene="fhcD"
                     /locus_tag="VFD73_15470"
                     /EC_number="2.3.1.101"
                     /inference="COORDINATES: protein motif:HMM:NF002554.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="formylmethanofuran--tetrahydromethanopterin
                     N-formyltransferase"
                     /protein_id="HZI75385.1"
                     /translation="DVFIEDTFAEAFTMRVARIIITAESLRWVRAAALKLTGFATSVI
                     GCKVEAGIERELPAGETPDGRIGVSVLLMTMSKDDMSKRLIERIGQTVLTCPTTACYD
                     GLPEAADRVGVGSALRFFGDGFQISKVIAGERFWRIPVMEGEFLVQERFGMLKGVGGG
                     NFLILARSAGAALSAAEAAADAMNAEPGVILPFPGGVVRSGSKVGSRRSKTMIASTND
                     AFCPTLRAVTATALPEDVNSVLELVINGTDAGAIARAMRAGISAACREGVVAISAGNY
                     GGKLGPHHFHLRQILSETAG"
     gene            890..1657
                     /locus_tag="VFD73_15475"
     CDS             890..1657
                     /locus_tag="VFD73_15475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75386.1"
                     /translation="MSGGLEARLREPLDQRADFSEVLRPGWTTLPAGEIARRPVYLER
                     TGPVLLGDLFDLSGEPAAHIRFSGALRQADRLGLGLTEGTVVVDGNVGDDAGVGMAGG
                     VLDIHGDAGARTGAAAGGFKLGMLGGELIVRGSAGPETGSFMRRGVLVIGRRAGERTG
                     LGMIAGSVVIMGAAGPDTGLWSKRGSVVALGEIAPPATYAYACTYRPIHLRVLLRHLR
                     ARYGLAVQRRHITGQYRRFSGDFAETGKGEILQWTSK"
     gene            1642..2613
                     /gene="mch"
                     /locus_tag="VFD73_15480"
     CDS             1642..2613
                     /gene="mch"
                     /locus_tag="VFD73_15480"
                     /EC_number="3.5.4.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR03120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018759 - methenyltetrahydromethanopterin
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methenyltetrahydromethanopterin cyclohydrolase"
                     /protein_id="HZI75387.1"
                     /translation="MDVQVTSFRMNELASEIVEAMVDQADLLRIRAQRLPGGARVVDA
                     GVEVDGGIEAGLALAEICMGGLGNVTTAQVQIGNQSYPGLLVWTDHPAESCMASQYAG
                     WAISVGKFFAMGSGPLRAHARVEHELFDKLGYEEQAEAGVLVLEGRTLPTEEVAEWVG
                     QKAHLDPEQLTFVVAPTASLAGGVQISARIVETGLHKMETLGFDVRRVISAMGTAPLP
                     PVAKNDLKAIGRTNDCILYGGQARFTVRAGDTELEQLASQVPALASRDYGTPFYEIFK
                     RYDGDFYKIDPLLFSPAEVWLTSSETGRTFHAGRLNPEVLEASLYHS"
     gene            2626..3411
                     /locus_tag="VFD73_15485"
     CDS             2626..3411
                     /locus_tag="VFD73_15485"
                     /inference="COORDINATES: protein motif:HMM:TIGR02118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EthD family reductase"
                     /protein_id="HZI75388.1"
                     /translation="MRRRSSWVLFSLFALAACTKSGERGAETRGADTTSGAKSEAAGP
                     QAIVTVLYNTPKDTAAFEKYYAATHLPLLFANQDQIGFVRADFTRFSSTADGKKPTFY
                     RQAELYFNSMSDLKKGTATAGFKKVADDLPKFATGGITGMIATASNDHGSGSGSTGAI
                     FTVLYKTPKDSAAFEKYYAGTHLPLLDANRNEIGFDKAEFTKFESNLDGSAPARYRQA
                     ELYFSSMEALKKGTSTPGFKKIAGDLPNFATGGLDALVGVETK"
     gene            3414..>3962
                     /locus_tag="VFD73_15490"
     CDS             3414..>3962
                     /locus_tag="VFD73_15490"
                     /inference="COORDINATES: protein motif:HMM:NF037032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75389.1"
                     /translation="MRLAVLAARTGWHTGELERAAAERGYAISILPYEGLVATIGPDP
                     GLRSGASELDDADVILARIIPSGSLEQIIYRVDALHRLEDRGIPVVNSPRAIERSVDK
                     FWTSSLLEQCGLPTPETVVCDSVDEAFAAFHRFGDVVVKPLFGSMGLGMMRIGDPDLA
                     FRVFRTIEQIRGVFYLQRAIEHS"
BASE COUNT          732 a         1182 c         1301 g          747 t
ORIGIN      
        1 aggacgtctt catcgaagac acctttgccg aagcgtttac catgcgggtg gcgcggatca
       61 tcatcaccgc cgaatcgttg cgctgggttc gtgcagcggc cctcaagctc accggttttg
      121 cgacctcggt gatcggctgt aaggtcgaag cgggcatcga gcgcgagctt cccgccgggg
      181 agactccgga tggacggatc ggcgtcagcg ttctgctcat gaccatgagc aaggatgata
      241 tgagcaaacg cctgatcgaa agaatcgggc agactgttct cacctgtccc accaccgcct
      301 gctacgacgg actaccggaa gcggccgatc gcgtcggcgt gggatcggca ctccggttct
      361 ttggtgacgg ctttcagatc agcaaggtga tcgctggaga gcggttctgg cggattccgg
      421 tgatggaggg cgaattcctg gttcaggaac ggttcgggat gctgaaagga gtcggaggcg
      481 gcaacttcct gatcctggca cgctccgccg gtgcggccct ctcggcggcc gaagcggcag
      541 ccgacgccat gaacgcggag cccggggtca ttcttccctt cccgggcggc gttgtgcgga
      601 gcggaagcaa agttgggtct cgccgcagca agaccatgat cgcctccacg aatgatgcgt
      661 tctgtcccac gcttcgtgcc gtgacagcca ccgctctacc ggaagacgtg aactcggtcc
      721 tggagttggt catcaacggg acagatgcgg gtgccatcgc gcgggccatg agggccggaa
      781 tcagcgcggc ctgccgggaa ggcgtcgtgg cgatcagtgc cggcaactac ggcggcaaac
      841 tgggaccgca ccatttccat ctccgtcaga ttttgagcga gaccgccggg tgagcggcgg
      901 cctcgaggcg cgcctccgcg aaccactgga tcagcgggcg gacttttccg aggtgcttcg
      961 gccagggtgg acgacactac ccgctggcga gatcgccaga cgtccggtgt acctggagcg
     1021 gaccggtccg gtgctgctgg gagatttgtt cgacctgagc ggcgagccgg ccgcgcatat
     1081 ccgctttagc ggggcgctcc ggcaggccga tcgcctgggt ctcggattga ccgaaggaac
     1141 ggttgtggtc gacggcaacg tcggagacga tgccggggtc ggcatggccg gtggggtcct
     1201 ggacattcac ggcgatgcag gcgcgcgaac cggggccgct gctggagggt tcaaactggg
     1261 catgctcggc ggagagttga tcgtgcgggg gtccgccggt cccgaaactg gcagcttcat
     1321 gcgaagagga gtgctggtga tcggtcgccg cgcgggcgaa cgcaccggac tcggcatgat
     1381 cgcaggcagc gttgtcatta tgggcgccgc tggtcccgat accggccttt ggtccaaacg
     1441 tggctccgtg gtggccctgg gtgagatcgc acctccggcg acatatgcgt atgcctgcac
     1501 ctatcggccc atacacctgc gtgtgctcct gaggcacctg cgcgcgaggt atggactggc
     1561 cgttcagcgc cgacacatta ccgggcagta ccggcgattc agcggtgact ttgccgaaac
     1621 cggaaaggga gagatcctgc aatggacgtc caagtgacct cgttccgaat gaacgagctg
     1681 gccagtgaaa tcgtcgaggc tatggtcgac caggccgatc tcctgcgcat ccgtgcgcag
     1741 cggctgccgg gaggagcgcg agtcgtcgac gccggagtgg aggtcgacgg tggcatcgaa
     1801 gcagggctcg ctctggcgga gatctgcatg ggcgggttgg ggaatgtcac cactgcccag
     1861 gtgcagatcg ggaatcagtc atacccgggt cttttggtct ggaccgatca cccggccgaa
     1921 tcctgcatgg cttcccagta cgccggctgg gccatctcgg tgggaaaatt ctttgccatg
     1981 gggtccggcc ctttgcgggc ccatgctcga gtggaacacg agctgttcga caagctgggt
     2041 tacgaggagc aggcggaggc gggggtgctg gtgctcgaag gccggacact gccgactgaa
     2101 gaggtggccg agtgggttgg gcagaaggcc cacctcgatc cggagcagct gacctttgtt
     2161 gtcgccccga ccgccagctt ggctggtggg gttcagatct ccgctcgcat cgtggagacc
     2221 ggtctccata aaatggaaac ccttggcttc gatgtgcggc gggtgatcag cgccatgggc
     2281 accgccccgc tccctccggt cgcaaagaat gatctcaagg ccatcggccg gaccaacgat
     2341 tgcatcctct acggtgggca ggcccgattc acggtccgcg ccggcgacac cgagctggag
     2401 cagctcgcga gccaagttcc tgcgttggca tcgcgggact acggcacgcc gttttacgaa
     2461 attttcaaac ggtacgatgg agatttctac aagatcgatc ccttgctctt cagtccagcc
     2521 gaggtctggc tgaccagcag tgaaaccggg cggacctttc atgccggccg gctcaacccc
     2581 gaagtgctgg aagcctcact ctatcactct tgatcaggag ctctcatgcg acgccgctcg
     2641 agctgggtgc tgttctctct attcgcgctt gccgcctgca ccaagagtgg agagcgagga
     2701 gctgaaaccc ggggagccga cacgacctca ggagccaaat ccgaggcagc ggggccccag
     2761 gcgatcgtca ccgtgctgta taacacgccc aaggacacag cagcgttcga gaagtactac
     2821 gccgccaccc acctgccgct cctgtttgcc aatcaggatc aaatcggctt tgtgcgagcc
     2881 gactttaccc ggttctcgtc cacggcagat ggcaagaagc cgaccttcta tcggcaggcg
     2941 gagctctact tcaactcgat gagcgatctg aaaaagggaa ctgcaacggc cgggttcaag
     3001 aaggtggctg acgatctgcc gaagtttgcc accggaggga tcaccggaat gatcgcgact
     3061 gcttccaatg accatgggtc gggctctggc tcaacgggag cgatctttac ggtgctctac
     3121 aagactccca aggattcggc tgcattcgag aaatactacg ccggtaccca cctcccgctc
     3181 ctcgatgcca atcgcaatga gatcggtttc gacaaggccg agttcaccaa attcgagtcc
     3241 aacctggacg gttctgcccc ggccagatat cgccaggcgg agctctactt ctcttcgatg
     3301 gaagcgctca agaagggaac cagcacccca ggcttcaaga agattgcggg cgatctcccc
     3361 aacttcgcca ccgggggcct ggacgctctc gttggagtgg agacgaagta gcgatgcgtc
     3421 tggccgtact ggccgctcgc accggctggc acaccggcga gctggaacgt gcggccgccg
     3481 agcgggggta cgctatcagc atacttccgt acgaggggct ggttgccacc atcgggccag
     3541 acccagggct caggagtgga gcttccgagc tggatgacgc tgacgtgatt ctggcccgga
     3601 tcattccgtc cggttccctg gagcaaatca tttatcgggt tgatgcgctg caccgcctgg
     3661 aggaccgggg catcccggtc gtgaactcac ctcgcgccat cgagcgcagc gtcgacaagt
     3721 tctggacttc atccctgctg gagcagtgtg ggctgccgac accggagacg gttgtctgcg
     3781 acagcgtcga cgaagctttc gccgcatttc atcggtttgg agatgttgta gtcaagccgc
     3841 tgttcggctc catgggattg ggcatgatgc gaataggcga cccggacctg gcgtttcgcg
     3901 tgtttcgcac catcgagcag attcgcggtg tcttctacct gcagcgcgcc atcgagcaca
     3961 gc
//
LOCUS       DASRPQ010001346         1186 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3921768, whole genome shotgun sequence.
ACCESSION   DASRPQ010001346 DASRPQ010000000
VERSION     DASRPQ010001346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3921768"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1186
                     /locus_tag="VFD73_15495"
     CDS             <1..>1186
                     /locus_tag="VFD73_15495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75390.1"
                     /translation="RSTHAEAIPGPVLRALESDGSAADVVDASPETAFWRAEALLNHA
                     RTHPQASSLDVAIDVLRGGLRDLADGDEGRRWLLAPLSLAHWGRFERIKSRQALEELI
                     ETLRLTVDAIPAGDPDRSQYLTALADALCTRADASREMGYIGEAAAAVDAAIEELPPE
                     DPRQEGARLHALAERCRQWRADLAVDGNLGEAMRLINHGISMWSEFERSGNPAVAEQA
                     ITEFRTAVALAGDNPNHRGVMLANLGVALKKYSAFTSRDDLLDEAAEVLAQAVEAVGP
                     DPQRPTLLANLALARQDQFLRDRDPGRAQEAMSLMRQALADVPPGTPDRGKLLPDAGQ
                     IWANIAEVNNDPALLDEFLPELREAVTDKRYPRQQSYALYTALASILGVRAALSGDVG
                     DVD"
BASE COUNT          224 a          367 c          415 g          180 t
ORIGIN      
        1 acgcagcacc cacgcggaag ccatccccgg accggtcctg cgggcactgg agtcggacgg
       61 gtccgcggcg gacgtggtcg acgcgagccc tgaaacggcg ttctggaggg ccgaggccct
      121 gctgaaccac gcgcggactc acccgcaggc aagcagtctc gacgtcgcca tcgatgtcct
      181 ccgtggtgga ctgcgggacc tggcggacgg tgacgagggg cgccgctggc tgctggcgcc
      241 gctcagcctt gcgcattggg gacgtttcga acggatcaag tcacgccagg ccttggagga
      301 gttgatcgag accttgcggc tgacggtcga tgcgatcccc gctggggacc ctgaccgatc
      361 gcagtacctg acggctctcg ccgacgcctt gtgcacacgt gcggacgcca gccgggagat
      421 ggggtatatc ggcgaggcag cggcagcggt ggacgctgcc atcgaggagc tcccgccaga
      481 ggatccacgg caggaaggcg cgcggctaca cgccttggct gaacgatgca ggcaatggcg
      541 ggcggacttg gcagtcgatg gaaacctcgg cgaagcgatg cgcctgataa accacgggat
      601 cagcatgtgg agtgagttcg aacgcagtgg gaaccccgcg gtggccgaac aggcgatcac
      661 cgagttccgt accgccgtcg ccctggcagg tgacaaccca aaccacaggg gggtaatgct
      721 tgccaacctt ggtgtggcac tgaagaaata cagcgcgttc accagtcgtg acgacctgct
      781 cgacgaagcg gccgaggtgc tggcacaggc ggtggaagcg gtggggccgg atccacagcg
      841 cccaacgctt cttgcgaacc tggccctggc ccggcaggac cagttcctgc gcgaccgtga
      901 tcccgggcgt gcccaagagg caatgagcct gatgcggcag gcccttgccg atgtgccgcc
      961 tggcacgccg gaccgaggga aactattgcc tgatgccggt cagatctggg ccaacatcgc
     1021 ggaggtcaac aacgacccag cactgctaga cgaattcctt cccgagctca gggaggcggt
     1081 gaccgacaag cgttacccgc gccagcaaag ttatgcgctc tacacggcgc tggcgtcaat
     1141 tctgggggta agagcggcgc tttcgggtga tgtcggcgat gtcgac
//
LOCUS       DASRPQ010001347         3123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1741616, whole genome shotgun sequence.
ACCESSION   DASRPQ010001347 DASRPQ010000000
VERSION     DASRPQ010001347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3123
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1741616"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..304)
                     /locus_tag="VFD73_15500"
     CDS             complement(<1..304)
                     /locus_tag="VFD73_15500"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HZI75391.1"
                     /translation="MNLTFLREQLRRVRPANLRHLDRYVLWSWVRIFCLTAIGFPIVS
                     ILINLTDSLNRLLDRGLGMKEIAISYVYSIPENAFLVMPAAVLFATVFTVGSMSRYS"
     gene            complement(301..1851)
                     /locus_tag="VFD73_15505"
     CDS             complement(301..1851)
                     /locus_tag="VFD73_15505"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HZI75392.1"
                     /translation="MRLINRYLLRQLAAPFVFALAAQTSLMLLSQIAKKFGALVGKGL
                     PWTVIAEVFVLSLPFIVAMTLPMAVLLAVLYTFSHLAADNEITALRASGFSIYQVLAP
                     VLIWGACMSAFNFLFVDQVLPRSNARLRSLLIDIGRKKPTFELREQVINEVPPSQYFL
                     RASRIDAATGKLRGVTIYDVGGEASRRIIYADSGSMAYAEGQTDLSLRLYDGSIHQYR
                     PAEPTRFQLTYFAVNDIRVKNVYDQLQRNTSESIRGDREMSTCEMLQVIHDAERDQQE
                     ARDERRKLAERDLRLLLNLPPPPVTPATPPDTTPKGYCGWVESLERSVLPKTVKAQTP
                     AHPQRVTPQAPSRAVPQAPPRVTPQPQPPIKPQAQPQIRLSTWSEVASAADRVQEADR
                     RADRYAVEVHKKWAISLACISFVIIGIVMALRFPRAGIGLVIGGGLAVFSIHYVGLTA
                     GESLADRGLMEPWLSMWLPNIILTILGLIGLVRVSRESGTTRGGDFQEMVDAVRHLFR
                     RARGALGR"
     gene            1928..>3123
                     /locus_tag="VFD73_15510"
     CDS             1928..>3123
                     /locus_tag="VFD73_15510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75393.1"
                     /translation="MCSASLGRLLAAFIGLVALPEVLLAQADSTRADTAGLGVHVSFG
                     VAPFTLKEPAVLRAPWAAAPRLPPGARASAWDSTVAVALDSARQERRAGLRSLVLYGQ
                     PESEPEAGVTPTPESNVLGLSKKYADLALDGQVRLELRTDRLRNERCGAAQLLDPNSG
                     CRGGFKPPRLDNQVNVRSSGILGERVHLAVDYDTERDFTANNNVQVYYQGLEDEIVRR
                     IEVGTVTFQPPQSRFLTAAIPANNFGVNARFEVGPFQIQTLAATQKGSQLAQRTYTIG
                     QTTSQPQDRQLRDLDFETGRFFWVVDPKTAVPGYPQIDILNLTRGTVAPVNQPTDVRV
                     YRYRPPQSQTVADPNLGGITATARATDPSQSFGPVRWQLLIQGTDYYVDPSGLWIALA
                     TKLDQN"
BASE COUNT          587 a         1020 c          960 g          556 t
ORIGIN      
        1 cggaataccg gctcatcgag ccgacggtaa agacggtggc aaacagcacc gccgccggca
       61 tgaccaggaa cgcgttctcc gggatggagt agacgtagct gatcgcgatc tccttcatgc
      121 ccaggccacg atccagcagc cgattgagac tatccgtcag attgatcaga atcgagacga
      181 tgggaaagcc gatcgcggtg aggcagaaga ttctgaccca gctccacagc acatagcggt
      241 cgaggtgcct gaggttcgcg ggccgcaccc gtctgagctg ttcccggaga aacgtgaggt
      301 tcaacggccc agcgccccgc gtgcgcgacg gaacaggtga cgcaccgcgt ccaccatctc
      361 ctggaaatct ccgccccggg tcgtcccaga ttcgcggctc acccgaacta gaccgatcag
      421 gcccaggatc gtcagaatga tgttcggcag ccacatcgag agccacggtt ccatcaaccc
      481 gcggtccgcc aggctctcgc ccgcagtgag cccaacgtaa tggatcgaga acaccgccag
      541 cccgcctccg atgaccaggc cgatgccggc ccggggaaac cgtagcgcca tcacgatgcc
      601 gatgatgacg aacgaaatgc aggcgagact gatcgcccac ttcttgtgga cctccacggc
      661 gtagcggtcc gcccggcgat cggcctcctg gacccgatcg gccgcagagg cgacctcaga
      721 ccaggtggaa agccgtatct ggggctgagc ctgcggcttg atcgggggtt ggggctgcgg
      781 cgtaacccgg ggcggagcct gcggcacggc ccgggacgga gcctgcggcg tgaccctctg
      841 agggtgtgca ggtgtctgcg ccttgaccgt cttgggaaga acggagcgtt ccagtgactc
      901 cacccagccg cagtatccct tgggcgtcgt atccggtggc gtggccggag tcaccggagg
      961 tggcggaaga ttcagcagga gccgcaggtc ccgctccgcc agcttccttc gctcgtcacg
     1021 agcctcttgc tggtcccgct ccgcatcgtg gatgacttgg agcatctcgc aggtgctcat
     1081 ctcccggtcg ccgcgaatcg actcgctggt gttgcgctgc agctggtcgt acacgttctt
     1141 gacccgaata tcgttcaccg caaagtaggt caactgaaaa cgggtaggct cggctggccg
     1201 gtattgatgg atcgacccgt cgtacagccg taagctcagg tcagtctggc cctcggcgta
     1261 ggccatcgag ccgctatcgg cgtagatgat gcgccggctg gcttcgccac ctacgtcgta
     1321 gatggtcacc ccgcggagct tcccggtggc cgcatcgatc cggctggctc tcaggaagta
     1381 ctgcgacggc ggaacctcgt tgatcacctg ttctcgaagc tcgaaggtcg gcttcttccg
     1441 gccgatgtcg atgagaagcg atcggagccg ggcattgctg cggggcagga cctggtcgac
     1501 aaagaggaaa ttgaaagcgg acatgcaggc gccccagatc agcaccggag caagaacctg
     1561 atagatactg aagccgctgg cccgcagtgc ggtgatttcg ttgtctgccg ccaggtggct
     1621 gaaggtgtac agcactgcca gcagcaccgc catcgggagt gtcatggcca cgatgaacgg
     1681 caagctcagc acgaacacct ccgcgattac cgtccagggc agacccttcc ccaccagagc
     1741 gccgaacttc ttggcaatct ggctcaggag catgaggctg gtctgggcgg ccaatgcgaa
     1801 gacgaaaggc gcggccagct gtcgcaggag atagcggttt atcaggcgca cagcggctaa
     1861 cttgtcttgt tgtaagggtt ttctaccgcc attatatttc tcgcttcact acttccaagc
     1921 cctatcgttg tgttccgcta gtctggggcg tcttctcgcc gctttcatcg gcctggttgc
     1981 gttacccgag gtcctgctcg cgcaggccga ttcgactcgg gccgataccg ccggcctggg
     2041 tgtccacgtc agcttcggcg ttgctccatt taccctcaag gagcctgccg tcctgcgtgc
     2101 tccctgggca gctgcacctc ggctgcctcc cggtgcgcgc gcgtcggcct gggacagcac
     2161 cgtcgcagtt gccttagatt ccgcccgaca ggaacgccgc gccggcctca ggtcgctggt
     2221 gctctacggt cagccagagt ccgagcctga agctggggta acgccgactc ccgagagcaa
     2281 tgtgctcggg ctctccaaga agtatgccga cctggccctc gacggccaag tcagactgga
     2341 gcttcggacc gaccggctgc gcaacgagcg ctgcggggcc gcccagctgc tcgacccaaa
     2401 ctccggctgt cgcgggggat tcaagccgcc caggctggac aatcaggtca acgttcgatc
     2461 cagcggtatt ctgggagagc gggttcacct cgccgtcgat tacgacaccg agcgggactt
     2521 caccgccaac aacaacgttc aggtctacta tcagggcttg gaggacgaga tcgtgcggcg
     2581 gatcgaggtc ggcacggtca ccttccagcc gccgcagtcc cgattcctca ctgccgcaat
     2641 tccagccaac aacttcgggg tgaacgcccg gttcgaggtt gggccctttc agatccagac
     2701 gctggctgca acccagaaag gaagccagct ggcgcagcgg acgtatacca ttggccagac
     2761 caccagccaa ccgcaggatc gtcagcttcg cgacctggac ttcgagaccg gccggttctt
     2821 ctgggtggtg gaccccaaaa cggcagtccc gggatatcct cagatcgata tcctgaacct
     2881 gacccgcggt accgtcgctc cagtcaatca accgaccgac gttcgggtct accggtatcg
     2941 cccccctcag agccagacgg tggccgaccc caacctcgga ggcattaccg ccaccgcccg
     3001 cgcgaccgac cccagccaga gctttgggcc ggtgcgttgg caactgttga tccagggaac
     3061 cgactactac gtcgatccct ccggcctctg gatcgccctc gcgaccaagc tggaccagaa
     3121 cga
//
LOCUS       DASRPQ010001348         1242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1741781, whole genome shotgun sequence.
ACCESSION   DASRPQ010001348 DASRPQ010000000
VERSION     DASRPQ010001348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1741781"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..>1242)
                     /locus_tag="VFD73_15515"
     CDS             complement(94..>1242)
                     /locus_tag="VFD73_15515"
                     /inference="COORDINATES: protein motif:HMM:NF012688.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HZI75394.1"
                     /translation="DRKLFQRLSEELGTDLRRLELEIAQAAGTDLNLNSPRQLATVLF
                     EKLQLPVLKKTKTGPSTDADVLEQLAAMGHELPRLILEYRELQKLKSTYVDTLPERVN
                     RQTGRIHTSFNQAGAATGRLSSAEPNLQNIPVRTPRGEAIRAGFIPRPGWVFLVADYS
                     QIELRIMAHLYGDPAFIEAFHQGGDIHRQTAALIFGVPPDQVTSEMRARAKTINFATI
                     YGQGAFALSRQLGISLEDARGFIARYFERFSGVRGFLDRQIELARQQGYVETLFGRRR
                     YIPEIKERNFSLRSYGERNAQNSPLQGSAADLIKLAMVRIHDAIGQMGLSGRMLLQVH
                     DELIFEAPPEEVPAMTELVRSHMEQVVELRVPLVVDIGTGPNWLDAKK"
BASE COUNT          247 a          377 c          374 g          244 t
ORIGIN      
        1 atgacagcgc cttgtaccag ctcccaggct ccaggggaac agatgcaagg accggcgcgc
       61 taccggtcac atgcaaattc tgcgcacgaa agtctatttc ttggcatcca gccaatttgg
      121 gccggtgccg atgtccacca ccaagggaac ccgcagttcc accacctgtt ccatatggct
      181 ccgcaccaac tcggtcatgg ccggcacctc ctcaggtgga gcctcgaaaa tcagctcgtc
      241 gtggacctga agcagcatcc gtcccgaaag tcccatttga ccgattgcat cgtggatccg
      301 aaccatggcg agcttgatca gatctgccgc tgacccctgc agcggagagt tctgggcatt
      361 gcgttcgccg tacgagcgca ggctgaagtt ccgttctttg atctccggta tgtagcgacg
      421 cctcccgaaa agcgtctcga cgtagccctg ctgccgagcc agctcgatct gccggtcgag
      481 aaaccctcgc acccctgaaa acctctcgaa atagcgagca atgaagcctc gagcatcttc
      541 gagagagatt cccagctgac ggctcagcgc aaaggcgcct tggccataga tggtggcgaa
      601 gttgatcgtc ttggcccggg cccgcatctc cgaggtcacc tgatcgggcg gaactccaaa
      661 gatgagcgcg gcggtctgcc ggtgaatgtc tccgccctga tgaaacgcct cgatgaaggc
      721 aggatcgccg taaaggtggg ccattatccg gagctcaatc tgcgagtaat cggcgaccaa
      781 aaagacccag ccggggcgcg gaatgaaacc ggctcgaatg gcctcgccgc gaggggttcg
      841 taccggaatg ttctgcagat tgggctccgc ggagctcagg cgcccggtgg cggctccggc
      901 ctgattgaag ctcgtgtgga tgcgtccagt ctgtcggttc acccgctccg gcaaggtgtc
      961 gacataggtg ctcttgagct tctgcagctc acggtactcg agaatgagac ggggaagctc
     1021 gtggcccatt gccgcgagtt gctccaacac gtcagcgtcg gtggagggac cggtcttggt
     1081 cttcttgagg accgggagct ggagcttttc gaacaggacg gtcgcgagtt gccgaggcga
     1141 gttcaaattc agatcggtgc ccgcggcctg agcgatctcc agctcgagtc gccgcagatc
     1201 ggtgcccaat tcttcgctca gccgctgaaa cagtttccgg tc
//
LOCUS       DASRPQ010001349         1003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2056856, whole genome shotgun sequence.
ACCESSION   DASRPQ010001349 DASRPQ010000000
VERSION     DASRPQ010001349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2056856"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..473
                     /locus_tag="VFD73_15520"
     CDS             <1..473
                     /locus_tag="VFD73_15520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75395.1"
                     /translation="ALSGLVIEQLATHPERYFPDRAAWQAHLERLGIAALTVTPDPVR
                     IATEGALWGAIKAHGLLPGTVIVSDDAGQFAIGLHGLCWVHAERLVHKLDTFTDHQRT
                     AQQRIPALIWWFYRDLKAYRREPTPRRRSELRARFDRIFQRRTGFVVLDRLLAR"
     gene            470..772
                     /locus_tag="VFD73_15525"
     CDS             470..772
                     /locus_tag="VFD73_15525"
                     /inference="COORDINATES: protein motif:HMM:NF015038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI75396.1"
                     /translation="MSLLHAHKPELLRVLNRPEIPLHTNGSENDLRAQVTRRKVSGGT
                     RSDTGRDCRDAFLGLAKTCAKLGLSFWDYLGARLDVPDQPAIPYLPDLVRSRCSPV"
BASE COUNT          176 a          345 c          308 g          174 t
ORIGIN      
        1 gggccctatc cgggctggtc atcgagcagc tggcaaccca tccggagcgg tatttcccgg
       61 atcgggcggc ctggcaggcc catcttgagc ggctgggcat cgccgcgctg actgtcacgc
      121 cggacccggt gcgcatcgcc accgagggcg cgctctgggg tgcgatcaag gcgcacggcc
      181 tgctgcccgg gacggtgatc gttagcgatg atgccggcca gttcgccatc ggcttgcatg
      241 gcctgtgctg ggtgcacgct gagcgcctgg tgcacaagct cgacaccttc acggatcatc
      301 agcggacggc ccaacagcgc atcccggccc tgatctggtg gttctaccgc gacctcaagg
      361 cctaccgacg cgagccgacc ccgcgacgaa gaagtgaact gcgggcgcgg tttgatcgga
      421 tcttccagcg tcggaccggc tttgtcgtct tggaccggct gctcgcgcgg tgagtttgtt
      481 gcacgcccac aagcccgaac tgctccgggt gctcaaccgc cctgagatcc cgctgcacac
      541 caacggatcg gagaatgacc tccgggccca ggtgacccgg cgcaaggtga gcggcggaac
      601 ccgcagcgac accggacgcg attgccgaga tgcctttctc ggcctggcta agacctgcgc
      661 caagctcggt ctcagcttct gggactatct gggggccagg ctcgatgtcc cggatcagcc
      721 cgctatcccg tacctgcccg acctcgtccg gagccgctgc agccccgtct aaccgccacc
      781 agttttgccg ctgttacgtt tcgaagagat aaccccgtaa gacggggcta attctgtatc
      841 agaattccat cagggcgcgc gacatcacat tgtataatga cgtccatagc gcacaccgtc
      901 tcgtgcccga cccgccccaa ggccgcgcca gatcaaccaa cccgagccga agagcctcgc
      961 cacctcgcat ccagggcgtt tcagttctga aggaaggcgc agg
//
LOCUS       DASRPQ010001350         1152 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3317201, whole genome shotgun sequence.
ACCESSION   DASRPQ010001350 DASRPQ010000000
VERSION     DASRPQ010001350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1152
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3317201"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..504)
                     /locus_tag="VFD73_15530"
     CDS             complement(<1..504)
                     /locus_tag="VFD73_15530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HZI75397.1"
                     /translation="MGRHGSRAAEVLQERVLTPEREQCPSCGQRLWIAYTKQRRVVRL
                     DGVWRLTVRTRRCRNHACVLYHQPYVPEAVGAWVLPQAEFGLDVIALVGHLRYRDLRS
                     VPQIHRALQERGVAIAERSVTVLLHRYEELVALRLTDATRLREQLAEQGGVILAIDGL
                     QPDVGHEV"
     gene            complement(592..957)
                     /locus_tag="VFD73_15535"
     CDS             complement(592..957)
                     /locus_tag="VFD73_15535"
                     /inference="COORDINATES: protein motif:HMM:NF013842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI75398.1"
                     /translation="MRAYSTDLRERIVRAVVEGRPMREAARRFGVSVSTVKRYVVREQ
                     QMGSLERSPIPGGPRKISREHDALLLARLEAEPDATVLEHCAWWAEQYGQQLSEATMW
                     RAMRRLGWTHKKTRVAKPA"
BASE COUNT          179 a          436 c          330 g          207 t
ORIGIN      
        1 cacttcgtgc cccacatcgg gctgcaagcc gtcaatggcg aggatgacgc cgccctgctc
       61 cgccaactgc tcccgcagcc gcgtcgcatc cgtcaggcgc agcgccacca gttcctcata
      121 gcggtgcagc aacaccgtca cgctgcgctc agcgatcgct acgccccgct cctgtaaagc
      181 ccggtggatc tgcggcacgc tgcgcaggtc gcggtagcgc aagtggccca ccagcgctat
      241 gacatccagc ccaaactcgg cttgcggcaa cacccatgcc ccgacggctt cgggcacgta
      301 gggctggtgg tacagcacac aggcatgatt ccgacagcgg cgggtgcgca ccgtgagccg
      361 ccatactccg tccagccgca cgacccgccg ctgtttggtg taggcgatcc acagccgctg
      421 cccacacgac gggcactgct cccgctccgg cgtcagcacc cgctcctgca gcacctccgc
      481 tgcccggctg ccatgtcgtc ccatccccgg ccccctcccg tcctctgcgc gtcctctgcg
      541 cgtcctctgc gcgtcctacc ctcccgtctc tcgccagcct acgcctgcct gtcaagctgg
      601 ctttgccacc ctagtttttt tatgcgtcca gcccaggcgg cgcatcgcgc gccacatcgt
      661 cgcctcgctc agctgctgcc cgtattgctc ggcccaccag gcgcagtgct ccagcacggt
      721 ggcatccggt tccgcttcca gccgcgccag gaggagcgcg tcgtgctcgc ggctgatttt
      781 gcgggggcct cccgggatgg gtgaccgctc cagggatccc atctgctgtt ctcgcacgac
      841 ataccgtttg accgtggata cactcacgcc aaagcgccgg gcggcttctc gcatgggccg
      901 accttccacc accgcccgga cgatgcgctc ccgcaggtca gtcgaatagg ctcgcatacc
      961 tggtggctcc gcatcatccg tgccttgcca aactccctgc aagttgctct aagctagact
     1021 ttatccaacc tacgcggcgt aacagagcag gtcggtgagg tggtcgagca gggcatgggg
     1081 cattttcacc gggtcggatt cgtgagacaa gccgcagaaa gtcgtgcgag tccacagctc
     1141 gcggcgcacg ag
//
LOCUS       DASRPQ010001351         1140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1742317, whole genome shotgun sequence.
ACCESSION   DASRPQ010001351 DASRPQ010000000
VERSION     DASRPQ010001351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1140
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1742317"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..524)
                     /locus_tag="VFD73_15540"
                     /pseudo
     CDS             complement(1..524)
                     /locus_tag="VFD73_15540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015934064.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(666..>1140)
                     /locus_tag="VFD73_15545"
     CDS             complement(666..>1140)
                     /locus_tag="VFD73_15545"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HZI75399.1"
                     /translation="GAGPASYHIVGTGDFNNDGKSDILWQQDNGTGVYIWEMNGTQQI
                     GGGSAGAGPASYHIVGTGDFNNDGKSDILWQQDNGTGVYIWEMDGTTRIGGGSAGAGG
                     AGWHIVDTGDFNNDGRSDILWQQDNGTGVWIWEMNGTTQIGGGSAGAGGASWHIV"
BASE COUNT          224 a          368 c          326 g          222 t
ORIGIN      
        1 tcgacccgct cgcggaacca caggctgagc gccgaggtcg gctggttgtg cagccagagc
       61 caagccagct cgaccatggt tatccgcagt cgcgggttgc ccgccttgga gacaccctgc
      121 tcgtgatcga tcgagccgct ctgccagggg gttggcgaca gaccagcgta ggcggccacc
      181 tgcctgcggt tgtcgaaccg gcggaacagg ccctccgacc agaggacagc ggtggtttca
      241 ggaccgatac ccttgaaccg ggtcagcatg gtcggcggcg agatcgcctc gtcagttgct
      301 ggcttgagca aagcatcgcg ttccgctgcg atggccttca gctgcgccag cacgagctcg
      361 agccgatcca gctcgcggat gatctgcgcc ttcagatgca ccggcagggg ccggccgtca
      421 ccggtccgca ggtcttccaa tcgctcacgc cgactcttgc gcagcggctc gtagccaaac
      481 accccctggg cgaagagcag tcctctgatc cggttgacgt gagattaaat tcgagctact
      541 aacccgagca tcaaatagtt aacacaacaa cctgacgcga cctagtggaa ccaggaaatg
      601 cggagaaatg acgttacgta tttggcactc gggttagtaa tacagctgat caacgagact
      661 tcgtattaga cgatatgcca gctagcaccg ccggctccgg cagaaccccc gccgatctgc
      721 gtggttccgt tcatctccca gatccaaacg ccggtaccgt tgtcctgctg ccacagaatg
      781 tccgacctgc catcattgtt gaaatcaccg gtatcgacga tatgccagcc agcgccgccg
      841 gccccggcag aaccgccgcc aatcctcgtg gtcccgtcca tctcccagat atagacgccg
      901 gtgccgttgt cctgctgcca cagaatgtct gacttgccat cgttgttgaa atcaccggta
      961 cccacgatat ggtagctggc ggggccggct ccggcagaac ccccgccaat ctgctgggtt
     1021 ccgttcatct cccagatgta gacgccggtg ccgttgtctt gctgccacag aatgtctgac
     1081 ttgccatcgt tgttgaaatc accggtaccc acgatatggt agctggcggg gccggctccg
//
LOCUS       DASRPQ010001352         1071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4226094, whole genome shotgun sequence.
ACCESSION   DASRPQ010001352 DASRPQ010000000
VERSION     DASRPQ010001352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4226094"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..480
                     /locus_tag="VFD73_15550"
     CDS             <1..480
                     /locus_tag="VFD73_15550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75400.1"
                     /translation="NQNIPYIAAIHTNTDNRHVHILALIKAKRIPKQDLTRLIQTATA
                     AARAQRRLLDQDRSPASVPSPKSPGIPGSWQPRRGVSVPSARDWNSSPLRQETQVMLA
                     QQGPLCPNCGPGQEMERHGRGFVCPSCGLRMTRGYGLGITIQPGPSLELSLEGVGET"
     gene            534..>1071
                     /locus_tag="VFD73_15555"
     CDS             534..>1071
                     /locus_tag="VFD73_15555"
                     /inference="COORDINATES: protein motif:HMM:NF014581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HZI75401.1"
                     /translation="MATSPLFAKPDASLHKARFAKPGELAPLLGAPVPHQASLLLGVG
                     PYGRFLRIRPSAARREIGNLLVSAPTRRGKGLLAVSQLLTFPHSAIVNDIKGELFGLT
                     AGFRARLGPVFVIDPRGVGHRFDPLAQCRDEDDCRTMAVHLLHKSQHSEPDPFTKRAV
                     KMLTAIFRAGLLEEERLLP"
BASE COUNT          196 a          381 c          308 g          186 t
ORIGIN      
        1 aatcagaaca ttccctatat cgcagcaatc catacgaata ccgataaccg ccacgtgcat
       61 atcctggccc tgatcaaagc gaaacgcatc ccaaaacagg acctgacgcg tctcatccag
      121 accgcaacgg cggcggcacg agcccagcgg cgcctcctcg atcaggaccg ctcaccggcg
      181 tcagtaccgt caccaaagag cccgggcata ccaggcagct ggcaacctcg ccgtggagtc
      241 tccgtgccct ctgcaaggga ctggaattcc agtcccttga gacaggagac gcaggtaatg
      301 ctggcgcagc agggacccct ctgtcccaac tgcggcccgg gccaggaaat ggaacggcac
      361 gggcgcggct ttgtctgtcc ctcctgcggc cttcgcatga cgcgcggcta cgggcttggc
      421 atcaccatcc aaccgggacc gagccttgag ctctccctgg agggggtggg ggagacgtaa
      481 accctctctc cctcaaagag cggctggtct ccgcgcggct gctgctcgac cggttggcca
      541 cctcgccgct gtttgccaaa ccggatgcca gcctgcacaa ggcgcgcttt gccaaacccg
      601 gcgagcttgc cccgctgctc ggggctccgg tgccgcatca ggcaagtctc cttctcggcg
      661 tcggacccta cggccgcttt cttcgcatcc gcccgagtgc cgcccgccgg gaaatcggca
      721 acctgctcgt ttccgcgccg acccgccggg gcaaaggcct gttggcggtc agccagctac
      781 taaccttccc gcactcggca atcgtcaacg acatcaaagg cgagctcttc gggctgaccg
      841 cgggttttcg cgcccgcctc ggcccggtgt ttgtcatcga cccgcgcggt gtcggtcacc
      901 gctttgatcc gctcgctcag tgtcgggatg aggacgactg ccggacaatg gccgtacacc
      961 tactgcacaa atcccagcac agcgagccgg atccgttcac caaacgcgcc gtcaagatgc
     1021 tgacggctat tttccgggcc gggcttttgg aagaggaacg gctcctcccc t
//
LOCUS       DASRPQ010001353         1142 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1742645, whole genome shotgun sequence.
ACCESSION   DASRPQ010001353 DASRPQ010000000
VERSION     DASRPQ010001353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1742645"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..295
                     /locus_tag="VFD73_15560"
     CDS             <1..295
                     /locus_tag="VFD73_15560"
                     /inference="COORDINATES: protein motif:HMM:NF019886.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /protein_id="HZI75402.1"
                     /translation="GFYSLDASTNLNITEALSQLPPREQEVIRLRYFEHLGDSEIALR
                     LSAPLGTVKGRIRSGLLHLREQFEITPPVKRQSWPEPVCTPKRAAFQVSVMDS"
     gene            313..>1142
                     /locus_tag="VFD73_15565"
     CDS             313..>1142
                     /locus_tag="VFD73_15565"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI75403.1"
                     /translation="MRGIKITDYCDQNKLSPRQRLELFVPVCQAVQHAHQKGIIHRDL
                     KPNNVLVTLHDGRPVPKVIDFGIAKATGQPLTEHTQVTGVGSVVGTLEYMSPEQAELD
                     ALDVDTRSDVYSLGVLLYELLTGTTPLEKKRLKETAMLEVLRIIREEEPPRPSTRLSG
                     SKDTLPTISAQRQMEPAKLAKLLRGELDWIVMKALEKDRNRRYETANGFALDVQRYLA
                     DEPVLACPPSVGYRLGKFLRRNKGPVLTVGVIMLLLVAGIAGTSAGLVLTLAAERRAV
                     T"
BASE COUNT          224 a          366 c          372 g          180 t
ORIGIN      
        1 tggcttctac tccttggatg cctcgacaaa tttgaacatt accgaggcgc tgtcgcagtt
       61 gccgccgcgc gagcaagaag tgatccggct ccgttatttc gagcacctgg gagactcaga
      121 gatcgcattg cgcctgagcg ctccgctggg aaccgtcaaa ggccgcattc gcagcggcct
      181 gctccatctg cgcgagcaat tcgaaattac tccacccgtg aagcggcaaa gctggcccga
      241 accggtttgt acaccgaagc gagctgcgtt tcaggtgagc gtgatggatt cctgacggtc
      301 acacaaaggt aggtgcgggg aataaaaatc actgactact gcgaccagaa caagctctcg
      361 ccccgccagc gcctggagct gttcgttccc gtctgccaag ccgtccagca cgcccaccag
      421 aaggggatca tccaccgcga tctcaaaccc aataacgtgc tggtcacgct gcacgatggc
      481 cgcccggtgc ccaaggtgat cgacttcggc atcgccaagg ccaccggcca gccgctgacc
      541 gagcacacgc aggtcaccgg ggtcggctcc gtggtcggca cgctggagta catgagcccc
      601 gagcaggcgg agctggacgc gctggacgtg gacacgcgca gcgacgtcta cagcctcggc
      661 gtgctcctct acgagctgct gacgggcacc acacccctgg agaagaaacg cctgaaggaa
      721 acggcgatgc tggaggtgct gcgcatcatc cgcgaggagg agcctccccg ccccagcacg
      781 cgactgtccg ggtcgaagga cacgctgccg acgatctcgg cgcagcggca gatggagcct
      841 gcgaaactgg cgaaactgct gcgcggcgag ctggactgga tcgtgatgaa ggcgctggag
      901 aaggaccgca accgcagata cgagacggcc aacggcttcg cgctggacgt gcagcgctac
      961 ctggccgacg agccggtgct ggcgtgcccg ccgagcgtgg gctaccggct ggggaagttc
     1021 ctgcgccgca acaaggggcc ggtgctaacc gtgggcgtca tcatgctctt gctggtggcg
     1081 gggatcgccg gcacctcggc cggcctggta ctgacgttgg ccgccgagcg acgggctgtc
     1141 ac
//
LOCUS       DASRPQ010001354         1205 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1742655, whole genome shotgun sequence.
ACCESSION   DASRPQ010001354 DASRPQ010000000
VERSION     DASRPQ010001354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1742655"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1205
                     /locus_tag="VFD73_15570"
     CDS             <1..>1205
                     /locus_tag="VFD73_15570"
                     /inference="COORDINATES: protein motif:HMM:NF012873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="condensation domain-containing protein"
                     /protein_id="HZI75404.1"
                     /translation="VLDEQVAYWRGQLAGAPPALELPTDRPRPVTRSGQGGQCPVSLD
                     PPLVTGLRALGRGEGATLFMTLLAGFQVLLARYSGQTDVLVGSPIAGRTRAELEDLIG
                     FFVNTLALRVRVEEEETVEELLRRVPEEVLGAYAHQDVPYEKVVERVQVERAGEAGEL
                     FQVMLAVQNAPRAEIRLEGLEIEVGRVRNARAKFELTIWMGEEGGRLVGGVEYNAELW
                     DEESVQRVMRHLEELLRGVVAGGGKRVRELQMMSAAERRQVLEEWNETTRAIDQDRSV
                     PEQIAAMAATYPEQIAVEDGDQQLSYQQLNERANRLAHYLSSKGVGPEVTVGVMLDRS
                     IELVVALVAILKAGAAYLPLDPDYPEQRLRFMLADSQARLVITDSRYRNLVDTSAADL
                     IVMDQEREQ"
BASE COUNT          224 a          285 c          483 g          213 t
ORIGIN      
        1 ggtgttggac gagcaggtgg cgtactggcg tgggcagttg gccggtgcgc cgccggcgtt
       61 ggagttgccg accgaccggc cgcgcccggt cacccggtcc ggccagggcg ggcagtgccc
      121 agtgtcgctc gatccgcccc tggtgacggg tctgcgtgcc ttggggcgtg gcgagggtgc
      181 gacgttgttc atgacgttac tggcgggttt tcaggtgttg ctggcacggt attcgggtca
      241 gactgatgtg ttggtgggtt caccgatcgc gggtcggact cgcgcggagc tggaggatct
      301 gatcgggttc ttcgtgaaca cactggcgct gcgagtgcga gtggaggagg aagagacagt
      361 cgaagagttg ctgcggcggg tgcccgagga agtgctgggc gcgtatgcgc atcaggatgt
      421 gccgtacgag aaggtggtgg agcgggtgca ggtggagcgc gcgggtgagg cgggcgagct
      481 gttccaggtg atgctggcgg tgcagaacgc gccgcgtgcc gagatcaggc tggagggctt
      541 ggagattgag gtggggcgcg ttagaaacgc gcgggcgaag tttgagttga cgatctggat
      601 gggagaggaa ggcgggcgac tggtcggagg agtggagtac aacgcggagt tgtgggacga
      661 ggagagtgtg cagcgggtga tgcggcacct ggaggagttg ctgcggggag tggtggccgg
      721 aggcgggaag cgagttagag agttgcagat gatgagcgcg gcggagcgcc ggcaggtgct
      781 ggaggagtgg aacgaaacta ccagagcgat agaccaggac aggagtgtgc cggagcagat
      841 agccgcgatg gctgcgactt accccgagca gatcgccgta gaagacggag accagcagct
      901 cagctaccag caactgaacg agcgagcaaa tcgcctggcc cactatctca gcagcaaagg
      961 agtaggaccg gaggtgaccg taggagtgat gctggatcgc agcatcgagc tggtggtggc
     1021 gctcgtcgcg atcctgaaag caggcgcggc ctatctgcct ttggaccctg attaccctga
     1081 gcagcgactt cgtttcatgc tggctgactc gcaagcccgg ctcgtcatca ccgatagtcg
     1141 ctaccgcaat ctggtcgata cttcagccgc tgacctgatc gtgatggacc aggagaggga
     1201 gcaaa
//
LOCUS       DASRPQ010001355         1030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3622057, whole genome shotgun sequence.
ACCESSION   DASRPQ010001355 DASRPQ010000000
VERSION     DASRPQ010001355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1030
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3622057"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(142..597)
                     /locus_tag="VFD73_15575"
     CDS             complement(142..597)
                     /locus_tag="VFD73_15575"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZI75405.1"
                     /translation="MRALPLTAGLLLWAAALQAQYAPASHHESKTLTWGPAPAVFPKG
                     AQMAVVSGDPTKAAPFTIELSLPDGYQLKPHSHPTDEAVTVVKGTFLVGMGDVFDLSK
                     TQPMKPGDTGKLPAGHHHYATAKGATIVSVSSMGPFGMTYVNPADDPSK"
     gene            704..>1030
                     /locus_tag="VFD73_15580"
     CDS             704..>1030
                     /locus_tag="VFD73_15580"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI75406.1"
                     /translation="MSESPPRSYGSFCPVAQGSEVVAQRWVPLILREIMVGYHRFNEI
                     RQALPLISPSMLSRRLKSLEEDGVIRRQSDSEGITYTLTEAGEELRPIVDALGHWAKR
                     WVTRDYE"
BASE COUNT          178 a          343 c          313 g          196 t
ORIGIN      
        1 tggctctgaa tcctcccagc acatgcggcg gtctcctccc ctcgtgctaa cgcgccctgc
       61 ggagcagtca ccagcgccga ataccaccat ccgctctcga ctttcgactt tcgactctcg
      121 acttcgactc tcgactctcg actacttact cggatcatcc gccgggttca catacgtcat
      181 cccgaacggc cccatggacg acaccgacac gatcgttgct ccctttgccg ttgcatagtg
      241 atgatgcccc gccggaagct ttccggtgtc gcccggcttc atgggctggg ttttcgacag
      301 atcgaacacg tctcccatgc cgaccaggaa cgtccctttc accaccgtca ccgcttcatc
      361 ggtgggatgg gagtgcggct tgagctgata gccgtccggc agcgaaagct cgatggtaaa
      421 cggcgccgct ttggtcgggt cgccgctgac caccgccatc tgggctccct tggggaacac
      481 ggcgggagcc ggcccccagg tcaacgtctt ggattcgtgg tgcgaagccg gtgcatactg
      541 ggcctggagg gcggcggccc agagcaggag accggcagtg agtggaagtg cgcgcataga
      601 tagctccgag aaatgttggt cgatcgtgga cgcggagcac gctacggatt gctggcgcac
      661 gcaacaagta tcagattcgt accgccctca caccgagcgc ccgatgtccg agtctccgcc
      721 ccggagctac ggctccttct gccccgtcgc ccagggctcc gaagtcgtgg cgcaacgttg
      781 ggttccgctg attctgcgcg agatcatggt gggttaccac cgcttcaacg agatccgcca
      841 ggcgctgccg ctgatctcac cctcgatgct gtcgcgccgg ctcaagtcgc tggaggagga
      901 tggcgtgatc cggcggcaga gcgactccga agggatcacc tacacgctca ccgaagccgg
      961 cgaggagctt cggcccattg tggatgccct gggccactgg gccaagcgct gggtgacccg
     1021 cgactacgag
//
LOCUS       DASRPQ010001356         1521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2693366, whole genome shotgun sequence.
ACCESSION   DASRPQ010001356 DASRPQ010000000
VERSION     DASRPQ010001356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2693366"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..713)
                     /locus_tag="VFD73_15585"
     CDS             complement(<1..713)
                     /locus_tag="VFD73_15585"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HZI75407.1"
                     /translation="MSPLQAHLICLALVAADLAARVWRIQWIVQGLGHRLSAKDAFVL
                     NAFGDAASALTPLRIGGEPARLAGMLRSQVPAAAAFVALSLEALAAWPVLIVAAGWLM
                     WAYAPAWLDTVGPRLGHAAEQAWPWVATVLLVSIVAWAYARRITSPIGRQLRRPVRRA
                     MVYWRRMPRWPLVASVPLSVINLASRVAILPVLAWTLPEPPPLGPTILGSFALLYSQL
                     LLPTPSGAGAVELGFLGGAA"
     gene            complement(710..>1521)
                     /locus_tag="VFD73_15590"
     CDS             complement(710..>1521)
                     /locus_tag="VFD73_15590"
                     /inference="COORDINATES: protein motif:HMM:NF021601.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HZI75408.1"
                     /translation="TIRGGVAWLGPRVQPAVRDLPRGPQPLMLLVSIHDVTPALGPEV
                     IRLWQLCRDCGVTPALFVVPNWHGAWPIEQHSSFITWLRDRAGEGAEVVLHGERHDEV
                     GLPRRVRDSIRAIGRTAGEGEFLTLDAGTAMTRMQRGVDRLRALGLEPLGFVPPAWLA
                     GADIHLVASGCGLRFTEDHRSIRLLPSARRLPSPVVRWSARTPILAWGSVAVAAARYP
                     LQRGSRWPRIALHPQDLQHPAVSRSHRRTLRRWLTRHRPARYSDLIAVRPS"
BASE COUNT          317 a          507 c          496 g          201 t
ORIGIN      
        1 gcagctcccc caagaaaccc gagctcgacc gcgcccgcgc cggatggggt cggcaaaagc
       61 aactggctgt agagcagcgc aaaagagccc aggatggtgg ggccgagcgg tggcggttcc
      121 ggcagcgtcc aggcgagcac cggaagaatc gccacccggc ttgccagatt gatgacactc
      181 agtggaacgc ttgccaccag tggccagcgc ggcattctcc gccagtagac catcgctcgg
      241 cgaaccgggc ggcgaagttg tcgcccgatt ggtgacgtga tccgccgagc atacgcccag
      301 gcaacgatac tcaccagaag cactgtcgct acccagggcc atgcctgctc cgccgcgtga
      361 cccaatcggg gacccaccgt atccaaccag gcaggggcgt acgcccacat cagccatccc
      421 gcagccacga tcaaaaccgg ccacgccgcc agcgcctcaa ggctgagcgc tacgaacgca
      481 gcagcagccg gcacctggct gcgcagcatg ccggccagcc gggccggttc tcctccgatg
      541 cgcagcggag tgagcgccga agcagcgtcg ccaaaggcgt tcagaacgaa tgcgtctttg
      601 gccgagagcc ggtggcccag cccctgaacg atccattgaa tacgccatac ccgcgccgcc
      661 agatccgcgg ccaccagcgc cagacagatc agatgcgcct gcaaaggact catgatggcc
      721 ggaccgcgat caggtcggaa tagcgcgccg gccggtgtcg cgtaagccag cgcctgagag
      781 tcctgcggtg ggaacggctg actgcagggt gctggagatc ctgcgggtgg agggcgatcc
      841 tgggccaccg cgaaccgcgc tgaagaggat atcgtgcagc cgctacggcc acggaccccc
      901 acgccaggat tggcgttcga gcactccagc ggaccacggg agaaggaagt cgccgggcgg
      961 acggcaacaa tcggatcgaa cggtggtcct cggtgaagcg gagtccacag cccgatgcga
     1021 ccagatgaat gtcggccccg gcgagccagg cgggcggaac aaagccgagc ggctccaatc
     1081 caagggcacg caaccgatcg acgccacgtt gcatacgagt cattgcggtg ccggcgtcca
     1141 gcgtcaagaa ctcaccttct ccagcagttc tgccgatggc gcggatgctg tctcgtacgc
     1201 ggcggggtag accgacttca tcgtgccgct cgccgtgaag cacgacttcg gcaccctcgc
     1261 cagcccggtc gcgcagccag gtgatgaagc tggaatgctg ctcgataggc cacgcgccat
     1321 gccagttcgg gaccacaaac agcgcggggg tgacgccgca gtcgcgacag agctgccaga
     1381 gccgaatgac ctcggggccg agagccggcg tcacatcatg gatggagacg agcagcatca
     1441 acggttgagg acctcgcggt agatcgcgaa cagctggttg aacacgaggt cccagccatg
     1501 ccacgcctcc acgtattgtc g
//
LOCUS       DASRPQ010001357         1027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_783590, whole genome shotgun sequence.
ACCESSION   DASRPQ010001357 DASRPQ010000000
VERSION     DASRPQ010001357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_783590"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..340
                     /locus_tag="VFD73_15595"
     CDS             <1..340
                     /locus_tag="VFD73_15595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75409.1"
                     /translation="TVLETGVPIREGLHLYAQCLPGTRGGVTLLAINNSRDRSETLEL
                     PVTAERYSLTATRLQDEEVQLNGSPLPRHVPDEVPRLRGRPVGAGAVELAPVSITFLA
                     VARAGNTACR"
     gene            501..>1027
                     /locus_tag="VFD73_15600"
     CDS             501..>1027
                     /locus_tag="VFD73_15600"
                     /inference="COORDINATES: protein motif:HMM:NF014851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta galactosidase jelly roll domain-containing
                     protein"
                     /protein_id="HZI75410.1"
                     /translation="MRTTIDLNQNWHFVQDDRLTDEEALVDTLSHWERVTLPHTWNAH
                     DAASLHATDYKRGRGWYQLSFDTPSGGSRHWLEIGAASLVADVWLNGKKLGQHKGGFT
                     IFRFDVTDALKRGGPNTLLIKVDNSEPEEENDLTAIAPLGGDFNVSGGLYRYVRMIST
                     AGPVHFDLADMGGPGV"
BASE COUNT          205 a          318 c          312 g          192 t
ORIGIN      
        1 gacggtgctc gagactggag ttcccatccg ggaaggcttg cacctctatg cgcagtgcct
       61 gccaggcact cgaggcgggg tgactttact cgcgatcaac aacagccgtg accggtcgga
      121 aacgctcgaa ctcccagtca cagcagagcg gtacagcttg actgccactc gactccagga
      181 tgaggaagtg cagctgaacg gcagtccctt gcctcgtcac gtgccggatg aggtgcctcg
      241 gctacgcggc cggccagtgg gggcaggagc ggtcgagctt gcgccagtga gcatcacgtt
      301 cctggccgtg gcacgggcgg gaaataccgc ctgccgctga ggcctcttcg tcgtgatgtc
      361 ggtgtttcga actttaaccg taagccgcga tacctatgtc tacatccgca gcgaaaatcc
      421 tagcggtagt aatcctggct cctctatcac atcctgatgc ggtcgcagcg caacgcccga
      481 gcagcatcga cacaacgtcg ttgcggacca cgatcgacct gaaccagaac tggcacttcg
      541 tccaagacga ccgactcacc gacgaggagg cgctggttga taccctctcc cattgggaga
      601 gggtgaccct gcctcacacc tggaacgcac acgatgccgc cagcctccac gctaccgatt
      661 acaagcgcgg ccggggctgg tatcaactca gcttcgatac tccgtcgggc gggtctcgcc
      721 actggcttga gatcggtgcc gccagcctgg tagcggatgt ctggctgaac ggcaagaagc
      781 tgggccagca taagggtgga ttcaccatct tccgtttcga cgtgaccgat gccctgaagc
      841 ggggcggtcc caacactttg ctgatcaagg tggacaacag tgagccggag gaggaaaacg
      901 acctcactgc cattgctccg ctcggcggcg acttcaacgt ttcaggagga ctctatcgct
      961 acgttaggat gatctcgacc gccggtccgg tgcacttcga tctcgcggac atgggcgggc
     1021 ccggagt
//
LOCUS       DASRPQ010001358         1395 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1742985, whole genome shotgun sequence.
ACCESSION   DASRPQ010001358 DASRPQ010000000
VERSION     DASRPQ010001358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1395
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1742985"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(450..644)
                     /locus_tag="VFD73_15605"
     CDS             complement(450..644)
                     /locus_tag="VFD73_15605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75411.1"
                     /translation="MKYIADAADHSMSVSELRTALGVSEALMNEALWILSFPGDKRIL
                     YPAKDRVALGPEWQERCLAR"
     gene            complement(806..>1395)
                     /locus_tag="VFD73_15610"
     CDS             complement(806..>1395)
                     /locus_tag="VFD73_15610"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZI75412.1"
                     /translation="LARPGGNVTGVTFVQSELAGKRIELLKEAAPAVSRVGVIWNPRH
                     PDGELESTWNAARSLGVEVKSLEVRGTADFDQAFETVARERVQAVIVVSSRLMSLNRQ
                     RILDFAAKNRLVLVSGWGAWAAEGALLSYGPDLDVVVRRTASYVDKIFKGAKPADLPI
                     EQPTKFDLVMNLKTAKALGLTIPPSLLSRADEVIQ"
BASE COUNT          267 a          451 c          431 g          246 t
ORIGIN      
        1 ccagcgcggc acgcagctcg ccgtggacgg ccgtctcgat ggcgagccga acgtgctggt
       61 aaatcagctc gcctagcccg atccgctcgg actcatgcga aggtgctggc ttcctgatac
      121 cttgcccatg gtgcgccccc ccggcgggag tgtagcagtc ttgtagcccc gtctccgaat
      181 agcccgcacc gcctgccctt gtgctactaa aggccgccgc ccggattgtg taatgccttg
      241 cgcctagaca ccgctcctac gatggcgcca tgccccggcc actgacggac cgccagcgtt
      301 ggcaggaaga actgcaagag ttgaccgaga aggcagccaa acaccgcgcc gcgcacgcgg
      361 ccttgcccgc cagcgatagg gtccggcggg attttgatga gtggctaacg agggatgccg
      421 agaagcgcat ggtcgatctg tgggcgagac tagcgggcta ggcaccgctc ctgccactcc
      481 ggccctagcg ccacccggtc tttcgcggga tacaagatgc gtttgtcgcc gggaaagctg
      541 agtatccaga gcgcctcgtt catcagcgct tccgacaccc caagagccgt tcgcagttca
      601 gacacgctca tgctgtgatc cgctgcgtcg gcgatgtact tcatcccgca tcccctggcg
      661 aaatgcgtcg aggaagtgct gattagtgga cagagactcc gtgccgagga agccgatcag
      721 gtactcgggg gctgctgcgc ctcaacgggg agcggcgcgg cgaggaggcc gaggctgatg
      781 cgggagatga atgttcgacg ctccatcact ggattacttc atcggcccgc gacagtagcg
      841 acggggggat cgtcaagccc agggccttgg cggtcttgag gttcatcacc agatcgaact
      901 tcgtgggctg ctcgataggg agatcggcag gcttggcgcc tttgaaaatc ttgtccacat
      961 aggatgcggt ccgtcgaacc acgacgtcaa gatcgggacc gtagctgagc agagcaccct
     1021 ccgcagccca cgctccccac ccagaaacga gaaccaaccg atttttggcc gcgaagtcga
     1081 ggattcgctg acggttgagg ctcatgagcc gggatgacac gacgatgacg gcctgcacgc
     1141 gctctctggc cacggtctcg aacgcctgat cgaagtcagc cgtccctcga acctcgagag
     1201 acttgacctc gacgcccaag ctccgcgctg cgttccaggt gctctcgagc tctccatccg
     1261 gatgccgcgg attccagatc accccgaccc gcgagaccgc aggagccgct tctttgagca
     1321 gctcgatccg cttccctgcg agctcggatt gaacgaaggt cacgccggtg acattgccgc
     1381 caggacgagc aagac
//
LOCUS       DASRPQ010001359         1245 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2974146, whole genome shotgun sequence.
ACCESSION   DASRPQ010001359 DASRPQ010000000
VERSION     DASRPQ010001359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2974146"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(129..926)
                     /locus_tag="VFD73_15615"
     CDS             complement(129..926)
                     /locus_tag="VFD73_15615"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI75413.1"
                     /translation="MSLAGSPVVFVHGLWLHASSWNPWVELFREAGFVPSAPGWPGTA
                     DTVEETRQQPDQVAGKGIEDVVGHYAQIIGGLEARPVVIGHSFGGLIAQRLLGQDLAA
                     AAVAIDAAPIKGVIYLPPSALRVASIALRKPANRNLAVSLTKEQFRYGFGNALPEQES
                     DELYEGLTVPSPGKPLFEAALANFSPRSPAKVNTHNKTRGPLLLIAGGRDHTVPAAIT
                     TGTRKLYHKSPAVTDFREFPDRGHSLAIDHGWREIAQQALDWLNQRS"
     gene            complement(1025..>1245)
                     /locus_tag="VFD73_15620"
     CDS             complement(1025..>1245)
                     /locus_tag="VFD73_15620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75414.1"
                     /translation="GTKRQILDFPGFARWQGTSFAAATVSGAVAAKIGPDCDAQGALQ
                     AVLDSQNGMHAGIKRFSLSPVTAASSAT"
BASE COUNT          208 a          410 c          413 g          214 t
ORIGIN      
        1 atctccggtg acagcgattc acgctgtgca ccatccgttg ctccggtgaa tgtcgcattc
       61 cggactgaaa cgacgctgat acgggactga aacggcgtgc gccagaagga ggagggccca
      121 gccgatccct aggagcgctg attgagccag tcaagtgcct gctgggcgat ctcgcgccag
      181 ccgtggtcga tggccagcga atggccacgg tcggggaact ccctgaagtc agtgaccgcg
      241 ggcgacttgt ggtagagctt gcgggtcccc gtggtgatcg cggccggcac cgtatggtcg
      301 cggcctccag cgatgagcag cagtgggccc cgcgtcttgt tgtgggtgtt gactttggcg
      361 ggcgaccgcg gggagaagtt cgccagtgcg gcttcgaaca acggcttacc cggggacggg
      421 accgtcaagc cctcgtacag ctcatcggat tcctgctctg gcagcgcgtt gccgaacccg
      481 tagcggaact gctccttggt cagggacacc gccaggttgc ggttggcggg cttgcgcagc
      541 gcgatggagg cgacccgcag cgcagagggg ggcaggtaga tcacgccctt gatcggtgcc
      601 gcgtcgatcg ctacggccgc ggcggcaagg tcttgcccga gcaaccgctg cgcgatcagc
      661 cccccgaagg agtggccgat gaccaccgga cgagcctcaa gcccaccgat gatctgggcg
      721 taatgcccga cgacatcctc gatgcctttg ccggccacct gatcgggctg ttgccgggtt
      781 tcctcgactg tgtcggcagt gcccggccag cccggtgccg acggcacgaa accggcctcg
      841 cggaacaact ccacccacgg gttccatgag ctcgcgtgga gccacaaccc atgcacgaac
      901 actacgggac tgccggccag gctcatctgc ggtgcgctcc ttgccgcctc ggcctgcccg
      961 cgacggcagg caccttaaca gccagtttga tcccatccgg cccacctgtc accccagccc
     1021 gggattacgt agctgagcta gccgcggtaa ctgggctgag tgaaaatcgc ttgattcccg
     1081 cgtgcatgcc gttctggctg tcgaggacag cctgcagtgc cccttgggcg tcacagtcag
     1141 ggccgatctt cgcagcgacg gcgccgctga cggtcgcggc cgcgaacgat gtcccctgcc
     1201 agcgcgcgaa gcctggaaag tccaggatct gccgcttcgt gccat
//
LOCUS       DASRPQ010001360         1227 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_783773, whole genome shotgun sequence.
ACCESSION   DASRPQ010001360 DASRPQ010000000
VERSION     DASRPQ010001360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_783773"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..501
                     /locus_tag="VFD73_15625"
     CDS             <1..501
                     /locus_tag="VFD73_15625"
                     /inference="COORDINATES: protein motif:HMM:NF014713.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis CcdA family protein"
                     /protein_id="HZI75415.1"
                     /translation="GRALGYYQVWLQRAGGVLIILFGLLCLGVLSARPLLSEHRMQLE
                     QKPLGYLGSAVVGMAFAAGWTPCIGPVLGGILGLAATSADVTRGMLLLAVYSAGLALP
                     FLLAAIAVESFLGWFQRFRQFLPWVMRLSGLLLILVGGLLVTGQFTRLAGWLQGLTPE
                     ILREQL"
     gene            complement(498..>1227)
                     /locus_tag="VFD73_15630"
     CDS             complement(498..>1227)
                     /locus_tag="VFD73_15630"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI75416.1"
                     /translation="RGWVLQDISFRVEPGASLAIVGSTGSGKSTLVDLIVRTYDPDRG
                     SVLIDGVDIRQLSLTELRHAVGFVPQETFLFGETLRRNILLGAPDDGRLARVAEIAQL
                     TEALPSLPQGYDTLIGERGINLSGGQKQRAAIARALAQDPPIFVLDDALSAVDAHTEA
                     RILAGLRDALVGRTSIIVSHRLAAVRDADWILVLDGGRIVEQGTHRELLAAGGRYWEL
                     LRRQQMEEELEVERVGGETAAPSA"
BASE COUNT          194 a          385 c          400 g          248 t
ORIGIN      
        1 ggtcgcgcgc tgggctacta ccaggtttgg ctgcagcgag caggaggcgt gttgatcatc
       61 ctgttcggct tgctctgtct cggcgtgctc agtgcccgcc ccttgctctc ggagcaccgg
      121 atgcagctgg agcagaagcc gctgggctat ctcggatcgg cggttgttgg tatggcgttt
      181 gccgcggggt ggacgccctg catcggaccg gtgctgggcg gaatcctggg gttggctgca
      241 acgtcagccg atgtgacccg gggtatgttg ctcctcgcgg tgtactccgc cggactggcc
      301 ctgccgtttc ttctcgccgc cattgcggtg gagtcatttc tgggatggtt ccagcgtttc
      361 cggcagtttt tgccctgggt gatgcggttg agcgggctgc tgctgattct cgttggaggg
      421 ctgctggtga cgggccaatt cactcggctg gcgggatggc tccagggact gacgcctgag
      481 attcttcggg agcagctcta agcgctcgga gctgcggtct ctccgcccac tctctcgacc
      541 tccagctcct cttccatttg ctgccggcgc aacaattccc agtaccggcc tcctgccgcg
      601 agcagctcgc ggtgagtgcc ctgttccacg atcctgccgc catcgagcac cagaatccaa
      661 tcggcatccc gaaccgcggc caggcggtga gaaacgatga tgctggtgcg tcccaccagc
      721 gcgtcgcgaa gccccgccag aatgcgagcc tcggtatggg catcgactgc gctgagggca
      781 tcatcgagca caaagatcgg cggatcttgg gccagcgccc gggcaattgc ggcgcgctgc
      841 ttctgcccgc cggacagatt gatgccgcgt tcgccgatca acgtgtcata gccctgcggc
      901 agagaaggaa gcgcctccgt gagctgggcg atctccgcca cccgagccag ccggccatcg
      961 tctggcgcac cgagcagaat gtttcggcgc agggtttcgc cgaagaggaa cgtttcctgg
     1021 ggaacgaatc ccacggcgtg gcgaagctcg gtcaaggaga gctgccggat atccacgccg
     1081 tcgatcagga ccgacccccg gtcgggatcg tacgtgcgaa cgatcaggtc aaccagggtg
     1141 gattttcctg atcctgttga tccgacgatt gccagcgaag cgcccggttc cactcggaag
     1201 gaaatatcct gcaacaccca tccgcgc
//
LOCUS       DASRPQ010001361         1721 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1422354, whole genome shotgun sequence.
ACCESSION   DASRPQ010001361 DASRPQ010000000
VERSION     DASRPQ010001361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1422354"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..>1721)
                     /locus_tag="VFD73_15635"
     CDS             complement(160..>1721)
                     /locus_tag="VFD73_15635"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: protein motif:HMM:NF014560.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050797 - thymidylate synthase (FAD)
                     activity [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HZI75417.1"
                     /translation="LIRYEYQGPMLRIKQRGLDLFVTPDHRLWTQKMLDGGRWSPWHF
                     TTAETVSTRGIWRFRRDSTLVRGTIGSDECVIPARDYRSGRRDAGYETRVQKTRELRM
                     PVLAYARFLGYVIAEGYAYVPTRSGSPYVGITQSKGPVLDDILSVIDELGLSYGEYSD
                     PRKPQVVTLHIHGGRDFVRRVREDSGSGARNKRIPRWLMEHSDLQVLDVLWSALWAGD
                     GSMAGGSQVYSTVSEGLASDVQELLIRIGKASSVTFHDRDGTRHYRVRVLQNGIIGSK
                     PTARSWEPYNGLVWCVSTPNGIVYVRRNGNGVWCGNCYRSWEPGLNPNVRKVRDDQEV
                     YLQNILKQAHGSVLEHVSFSFVLHNVSRVFTHEIARHRPGTAISQESLRYVRLDELPF
                     WFPDWAREDPELMKRATALLTELEQFQVWLAGHFGLDEDETKMHEKKAKTSFMRRFAP
                     EGLATGLVWTANVRTLRHTIEARTDQGAEEEIRLVFGKIGELMRAEAPALFGDYTVTE
                     DGTWIPGWRKV"
BASE COUNT          321 a          582 c          493 g          325 t
ORIGIN      
        1 ggccagccgg tcggcgtgcg cccggatgtc gtcgttcagc ccgaacgcct cgtggatcgc
       61 caccacgcct ggccacggtc ccttggggcc tggcgacgca gcgggaaccg ccagataggc
      121 ggccgtggca ccgatcgtca catcaggcac cgccggcccc tataccttgc gccagccggg
      181 gatccaggtg ccgtcctcgg tcaccgtgta gtccccgaac agggccggcg cctccgcccg
      241 catcagctcg ccgatcttgc cgaacaccag gcggatctct tcctcggcgc cctggtcggt
      301 gcgcgcctcg atggtgtgcc gcagggtgcg gacgttcgcc gtccagacca gcccggtggc
      361 caggccctcg ggcgcgaacc ggcgcatgaa cgaggtcttg gccttcttct cgtgcatctt
      421 ggtctcgtcc tcgtcaagcc cgaagtgccc ggccagccac acctggaact gctcgagctc
      481 ggtcagcagg gcggtggccc gcttcatcag ctcaggatct tcccgggccc agtcggggaa
      541 ccagaacggc agctcgtcca gccgcacgta gcgcagcgac tcctgcgaaa tcgctgtccc
      601 cggacgatgc ctggctatct catgtgtgaa aacacgagag acgttgtgca acacgaaact
      661 gaagctgacg tgctcgagca ccgagccatg cgcctgcttc agaatgttct gcaggtacac
      721 ctcttgatcg tcgcgtacct tgcgcacgtt cgggttgagg ccgggctccc aggagcggta
      781 gcagtttcca caccagaccc cgttaccatt gcggcggaca taaacgatgc cattgggcgt
      841 cgaaacacac cacactagac cgttatacgg ctcccacgat ctggctgtcg gcttgctgcc
      901 aatgattccg ttctgaagca cgcgcacccg gtaatgtctg gtcccgtcac gatcatggaa
      961 ggtgactgaa gaggccttcc cgatccggat aagcaattcc tgtacgtcac tggccagccc
     1021 ttcggacaca gtggagtaga cctgagatcc tccggccatg ctgccgtcgc cagcccacaa
     1081 ggcggaccag aggacatcaa gcacctgcag gtcactatgc tccataagcc agcgtgggat
     1141 gcgcttgttc cgtgctccgc tgcctgagtc ctcccgcacg cgacggacga aatcccttcc
     1201 gccgtgaata tgaagcgtca ccacctgcgg ctttcgcgga tccgagtact ccccgtacga
     1261 caagccgagt tcgtcaataa cggagagaat gtcatccagc accggtccct tgctctgcgt
     1321 tatgcccacg tatgggcttc cgctgcgagt cggcacgtac gcgtaccctt ccgcgattac
     1381 gtacccaaga aacctggcgt aggccagtac tggcattctg agctctcggg ttttctgcac
     1441 cctggtttca taaccagcat ctcggcggcc agagcggtaa tcccgtgccg ggatcacgca
     1501 ctcatcggag ccgatagtgc cgcgcacaag cgtcgagtcc cgccggaagc gccatatacc
     1561 ccgagtgctt acagtctcag ccgtggtaaa atgccaggga ctccacctcc cgccatccag
     1621 cattttctgc gtccatagcc gatgatccgg agtgacgaaa aggtcgagtc cgcgctgctt
     1681 gatgcgaagc atcggaccct gatattcata tcggatcagc g
//
LOCUS       DASRPQ010001362         2336 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1093352, whole genome shotgun sequence.
ACCESSION   DASRPQ010001362 DASRPQ010000000
VERSION     DASRPQ010001362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2336
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1093352"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            92..1090
                     /locus_tag="VFD73_15640"
     CDS             92..1090
                     /locus_tag="VFD73_15640"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HZI75418.1"
                     /translation="MTRHSSPRSEEPSPRLALLAAFAAIYLFWGGTFLAIRYAVMEVP
                     PLLIIAIRCLGGAVILYAGMRWRGTLERASRQQWLTSAIAGAFLFVGCHGILAWAEQR
                     VSSGQAALYLTSTSLWLVLLSATRERRFPQAPVLAGLMLGVIGVALLVSGKDSAGTLL
                     DRLLLIGTGLSWAIGSLIGREGPRPVSAVQSTAMQLAAGGLAVLMVSIATGELTGWSV
                     HQITPRGGFSLVFLVLAGTVLGFGAYTWLLRVTTPALVGTSSFVNPVVALALGWVAGD
                     EVFSGRTVLAGIVVFGAVFLIWKGSWTRPKLYRPRTPPVPVSPAALRALARMRALL"
     gene            1201..1698
                     /locus_tag="VFD73_15645"
     CDS             1201..1698
                     /locus_tag="VFD73_15645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75419.1"
                     /translation="MRYLLCAALTLTACGRRDTVRDVSTDTAKITDTSMVSDTVRGPT
                     GGPGQTMTGLPDRLVGSWTAKGYDAGSSRAQPFTITWSRQPDGSLAGKIAFQTGEQYN
                     VKVVSTGDSSIVYESDPHQSPTLKAQVVTRTQARIVGDTLKGTYEAKAKGGKVLRGRF
                     VATRG"
     gene            complement(1821..>2336)
                     /locus_tag="VFD73_15650"
     CDS             complement(1821..>2336)
                     /locus_tag="VFD73_15650"
                     /inference="COORDINATES: protein motif:HMM:NF021942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070009 - serine-type aminopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HZI75420.1"
                     /translation="PPDATFSLRISDGVVKSYPMNGTIAPYKTSFYGLFARSAEFDDK
                     PPFQLPQRWKDHQNRLDLSTPLDFVTTNDIIGGNSGSPVINKNAEVVGLIFDGNIEQL
                     PNRFLYTDEVSRAVAVHSRGLTEALRKVYEADRIADELEGVQVSRAGARTDSLSAAPQ
                     PARDSVTAQGR"
BASE COUNT          376 a          745 c          776 g          439 t
ORIGIN      
        1 ggcggggaca tcagcaaggc cgtcttctac cccgaggacg agcgcttcct catcgagcgg
       61 gacaatgacg tgtcccatta cgaggtactc tttgactcgg cactcgtctc cccggtctga
      121 ggagccctcc ccgcggctcg cgctcctcgc ggcgttcgct gcgatctacc tgttctgggg
      181 aggaaccttt ctcgccatcc gctacgcggt gatggaggtg ccgccgctcc tcatcatcgc
      241 catccgctgc ctgggagggg ccgtcattct gtacgccggg atgcgctggc gcggtacgct
      301 ggagcgcgca tcccgccagc agtggctcac ctcggccatc gccggggcat tcctgtttgt
      361 cgggtgccac ggcatcctcg cgtgggccga gcagcgcgtc tcctcagggc aggcggcgct
      421 ctacctgacg tcgacctcgc tctggctggt gctgctgagc gccacccgtg agcgccgttt
      481 cccgcaggca ccggtgctcg cagggctgat gctcggagtg atcggagtgg ctctcctggt
      541 gagcgggaag gacagcgcgg gaaccctgct ggaccggctg ctgctgatcg ggaccggcct
      601 cagttgggcg atcggatcgc tgatcggccg cgaaggaccg cgaccagtgt ctgcggtgca
      661 gtccaccgcc atgcagctcg cggcaggcgg attggcggtg ctgatggtga gtatagcgac
      721 tggtgaattg actgggtgga gcgtgcacca gataacaccg cgcggcggat tctccctcgt
      781 cttcctggtc ctcgcaggaa cggtgctcgg tttcggggca tacacctggc tgctgcgggt
      841 gacaacgccg gcgctggtgg gcacctcctc cttcgtcaat ccggtggtcg cactggcgct
      901 cgggtgggtg gcaggagacg aggtgttctc cggccgaacc gtcctggcgg gaatcgttgt
      961 gttcggcgcg gtgttcctga tctggaaggg ctcctggacc aggccgaagc tctaccggcc
     1021 cagaacgccg ccggtgccgg tgtcgccggc agcgttgcgg gcgttagcac gaatgcgtgc
     1081 gctcttgtga gaggtcgctc agagcctgcc ccgaactttg tgagagggtg acagcaggaa
     1141 atacttcctt atccggacct ccggtgacat cttgggtcga accctccccg ggagtgaccc
     1201 atgcgctacc tgctctgcgc cgcattgacg ctcaccgcct gcggacggcg cgacaccgtc
     1261 cgcgacgttt ccaccgatac cgccaagatc accgacacca gcatggtgtc cgataccgtc
     1321 cgcgggccca ccggaggtcc gggacagacg atgaccggtc tcccggatcg gctggtcggc
     1381 agctggacag ccaaaggtta cgatgccggt tccagccggg cccagccgtt tacgatcacc
     1441 tggagccggc agcccgatgg cagtctggct ggaaagatcg cctttcagac tggtgaacag
     1501 tacaacgtga aggtggtctc gaccggagac agcagcatcg tgtacgagtc tgatccgcac
     1561 cagagtccca cgctcaaggc acaggtggtt acccgcaccc aggcgcgcat cgtgggcgac
     1621 acgctgaagg ggacctacga ggccaaggcg aagggtggga aagtgctgcg ggggaggttc
     1681 gtcgcgacca gaggatagta aaccaaagag tcatcgcgag ggccgcaggt tacgtggcga
     1741 tcccgttgtg gtagcggcgg gattgtcacg agcgctacgc gctctcgcaa tgactctcta
     1801 atcttttcgc gggcgcccga ctatcggccc tgtgccgtca cactgtcccg cgccggctga
     1861 ggcgccgcgc tgaggctgtc ggtccgagcg ccggcccggc tcacctgtac cccctccagc
     1921 tcgtcggcga tccgatcggc ctcgtagacc ttcctcaacg cttcagtcag gccgcgggag
     1981 tgcaccgcca ccgcgcgcga gacctcatcg gtatacagga agcggttggg gagctgctcg
     2041 atgttgccat cgaagatgag tcccaccact tcggcgttct tgttgatcac cggactgccc
     2101 gagttgccgc cgatgatgtc gttggtggtg acgaaatcga gcggcgtgct cagatccagc
     2161 cgattctgat ggtccttcca gcgctgcggc agctggaacg gcggcttgtc atcgaactcc
     2221 gccgaccggg cgaacaatcc atagaagctg gtcttgtacg gcgcgatggt gccgttcatc
     2281 ggatagctct tcaccacacc gtcgctgatg cgaagactga acgtggcatc cggcgg
//
LOCUS       DASRPQ010001363         1141 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3318691, whole genome shotgun sequence.
ACCESSION   DASRPQ010001363 DASRPQ010000000
VERSION     DASRPQ010001363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3318691"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            629..>1141
                     /locus_tag="VFD73_15655"
     CDS             629..>1141
                     /locus_tag="VFD73_15655"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003953 - NAD+ nucleosidase activity
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HZI75421.1"
                     /translation="MTASAGNLPGRIFMSYRREDTAYPAGWLYDRLAGHFARSQIFKD
                     IDSIELGDDFFEAITTAVGSCDVLLVLIGDRWLTVTGLDGRRRLDNPDDFVRLEIEAA
                     LARGVRVIPILVEGARMPRADELPASLSKLARRQALELSPSWFDIGTERLLRTLDGVL
                     ADAQISREYVA"
BASE COUNT          205 a          356 c          366 g          214 t
ORIGIN      
        1 aacgcggtga gggaatcacc cggttggccg accgcgagct gggcgcgagc gtactcgcgg
       61 tccagcgggt gcaggtagta gcgggcgttc tggaaccgca ccatctggcg gcgaaccagc
      121 ctgcgccggg cggtcgtgca actcgtaggg ctcgccgact agaacctgga cgacatcatc
      181 cctgggtggc cgcgacctca gctcagccgg cccgatgcat gtcatctaat aatatgagcg
      241 gctctcgact gcagatctcc caggggtcgt cgctgcgcat aatggcaagt ccttagtaag
      301 catctcgtca gtgcccctga accttgcaaa gatcctcctc gctgcaaggc acggaaccgc
      361 cggaaggttt ttcatggccg ccagcaggca gctatctggc tgtctctggg cagtttctcg
      421 tggccgtcgt aacggggcaa caccagggca gcctttgaac attccagcac gtcccggctc
      481 cctgaattcg ctttgcttcc atgcgttggg ccattaggat tagacggtgc cgccaagcta
      541 accagccggt cgcgtgagcg gcatgacgtg ccgccttgga gggctgagcg agacggtagg
      601 ggtcgggaac gcaacaaggg tcgagatcat gactgcatcc gccggtaacc ttccgggccg
      661 gatcttcatg agctaccgcc gcgaagatac tgcctacccc gccggctggc tatatgaccg
      721 gctggccggt cacttcgcca gaagccagat cttcaaggac atcgactcga ttgaactggg
      781 cgatgacttc ttcgaggcga tcaccaccgc ggtgggatcc tgcgacgtac tgctggtgct
      841 gatcggcgac cggtggctca cggtcaccgg cctggacggg cggcggcgcc tggataaccc
      901 cgacgacttc gtccggttgg aaatcgaagc tgcgttggca cgcggtgtcc gcgtcatccc
      961 catcttggtg gaaggtgccc ggatgccccg cgccgacgaa ctgccggcaa gcctttccaa
     1021 gctggcgcgc cggcaggcac ttgagctcag cccgagctgg ttcgatattg gtaccgagcg
     1081 gctgctcagg acgctggacg gagtgctcgc cgacgcgcag atctctcgag agtacgttgc
     1141 c
//
LOCUS       DASRPQ010001364         1313 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4227012, whole genome shotgun sequence.
ACCESSION   DASRPQ010001364 DASRPQ010000000
VERSION     DASRPQ010001364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4227012"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(266..631)
                     /locus_tag="VFD73_15660"
     CDS             complement(266..631)
                     /locus_tag="VFD73_15660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75422.1"
                     /translation="MPELPGRPVLTQASLLGDQAERADDIVRAQRRADPGREDQAVLL
                     PQVTGHVPVSFLLLPLLAQRLHATPRQRQSPPGFLGLGVAALALRAPDVDREAAFARP
                     GRIESSASDRLPSGEPYPF"
     gene            806..>1313
                     /locus_tag="VFD73_15665"
     CDS             806..>1313
                     /locus_tag="VFD73_15665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75423.1"
                     /translation="MPLNIGGEMRQKSGTARQIGSVSVIPSAVPAATSSPFLQSRRVA
                     DLPTRVLLELVVESSYAGNPWEELARRLVARALPDLEQSIRTGSIYQRCRRARLGIPQ
                     RPELQRRPIAQDIAAEAVEDCLERFKVKVLPRGECDPDWDVSLEDFFTVCCLPHVANR
                     WRWHLRQLP"
BASE COUNT          228 a          415 c          455 g          215 t
ORIGIN      
        1 tgtgaccgga cgtgcccgag cccagctgga acgccaccgc gtagccatca cgtgacctga
       61 gcgttcggac atcagctttg ctagagattc cgggtagcct aataggtagc caacgttgcc
      121 agatccaggg ctacatcagg ccacatccag ccggtggcga catgaccgaa tggcacgtca
      181 ggcgacacca gccatcaccc agccacactt cgaaagtgcc tcctaagcag taggtcccgc
      241 gttcgagtcg cggtcggggc gcaggtcaga aggggtacgg ctccccggat ggcagtcggt
      301 cgctagcgct ggattcgatc cgtcccgggc gggcgaaggc cgcttcgcga tctacgtctg
      361 gcgctcggag cgcgagggcg gcgacaccaa gaccgagaaa tcccggagga ctctggcgct
      421 gccgcggcgt tgcgtggagg cgctgcgcca gcagcgggag cagcaggaac gagaccggca
      481 cgtggccggt gacctgtggc aggagcacgg cctggtcttc gcgtccaggg tcggcacgcc
      541 gctgagcgcg aacaatgtca tccgcgcgtt ccgcctgatc accaagaagg ctggcctggg
      601 tgaggactgg gcgccccggg agctcaggca caccttcgtg tcggtcatgt cacgagatcc
      661 gccccgccct cacccagggc gccgaggtaa tggacaagat cttcggttag cttgtcagac
      721 ggatgtcaga actggtcgtc ggcggtgcat acgtcccagg ccgtggaggt taggggtccg
      781 tccggctggg agtgccgctg gagtagtgcc actgaacatc ggcggcgaga tgcgtcagaa
      841 atcaggaacg gcccgacaga taggaagtgt gagcgtcatt cccagcgccg tccccgcggc
      901 cacgtcgtct ccgttcctgc agtcgcgcag ggtagctgac ctgccaacgc gcgtgctgct
      961 tgagctggtg gtggaatcga gctacgccgg gaacccgtgg gaggaactgg cgcgccgcct
     1021 ggtcgcgcga gcgcttcccg accttgagca gtccatccgt accggaagca tctatcagcg
     1081 ctgccgccgg gcccggctgg ggattcctca gagaccggag ctgcagcggc ggccgatcgc
     1141 gcaggacatc gcggcggaag ccgtggagga ctgcctcgag cggttcaagg tcaaggtgct
     1201 gccccgcggt gagtgcgatc cggactggga tgtgtccctg gaggacttct tcaccgtgtg
     1261 ctgccttccg cacgtcgcga accggtggcg ctggcacttg cgtcagctcc ccc
//
LOCUS       DASRPQ010001365         1297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3623316, whole genome shotgun sequence.
ACCESSION   DASRPQ010001365 DASRPQ010000000
VERSION     DASRPQ010001365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3623316"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(221..544)
                     /locus_tag="VFD73_15670"
     CDS             complement(221..544)
                     /locus_tag="VFD73_15670"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI75424.1"
                     /translation="MMAEVSSGARRLIPFTPGPGPRIANAGFVVQPARRGEGAGRAPC
                     RHILEQARADGYRAMQFNAVVETNTPAIRLWRSFGFQILATVPEAFRHPLHRYVGLHI
                     MYKPL"
BASE COUNT          238 a          412 c          414 g          233 t
ORIGIN      
        1 gccgccgtcc tgctcgggtg gcccgacacc ttcgacgccg agtacgtcgc actgacccag
       61 ctccacgcgg acgcgctgat caccctcgac cggcaactgg ccggtgccgt taaggatctg
      121 gtcacggtcg cacctattga agccctttac tgaccaggcg ggccttacga gcggcactgc
      181 catgcgaaca cactcttctg aaatgagtgc gtcttttgct tcacagcggc ttatacatga
      241 tgtggagtcc aacgtatctg tgtagcgggt gacgaaacgc ctccggcacc gtggcgagga
      301 tctgaaagcc gaaggagcgc cacaaccgga tcgccggggt attggtttcg acaaccgcat
      361 tgaactgcat cgcccggtag ccgtctgcac gtgcctgttc aaggatatgc cggcacggag
      421 cccggcctgc gccctcacca cgccgcgccg gctggacgac aaagccggcg ttggcaatac
      481 gtggccccgg gccaggggtg aatgggataa gtcttcgcgc tcccgatgac acttccgcca
      541 tcatccacgg cgacaatggt gcgacctggc ggctttcgca tccacccgga gcgtgctcgc
      601 gcttcgggtc tcgcggaatc ccaggtcagg ttctcgcctg cggtccccac ctctctcaag
      661 atcggccaga cggcgggcca gtcctctgcc gttgcctcac gtatcaccat gtagagaagc
      721 atggcgcaga ccgcactcat ttgaccgctg gacagggtcg agcagcgcag gcctggcgcg
      781 aggctaggcc atgcccgggg aacagccgac agccgccgac tctgctactg gaggacggag
      841 gctgacgggg aagcctgcca cggagagcaa cctgagtctt cacacacccg cgcaaagagt
      901 cgccgttcgg agcgacttcc aggcgtttgc tttcatccgg tgcggccatc cataacgatc
      961 tttctgccgc ccgctggtgg aggggaaggg acgacaggcg gcggtgctgt tgatgacgtg
     1021 gccggaagcg gatcgaacgt aagtcgcccg ccgagcctgc ggcctgtcgg cgaggttctg
     1081 gtgggcaggc ccattgggtg tcgcgtcgta gccggcctgg cgcgagccta gtgaagtaca
     1141 gggctccgtt ctggccctaa gggaggtgtc ggaccaggaa gcatgaatgg ccctcctttg
     1201 ccaccggctg ggcactggga aatcgaagca atgcagcgcg ccacgggctt gccgagttgg
     1261 aagcagctgc tctaaatgtg tatctaaacc accgctc
//
LOCUS       DASRPQ010001366         1438 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1093799, whole genome shotgun sequence.
ACCESSION   DASRPQ010001366 DASRPQ010000000
VERSION     DASRPQ010001366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1438)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1438)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1438
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1093799"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            437..>1438
                     /locus_tag="VFD73_15675"
     CDS             437..>1438
                     /locus_tag="VFD73_15675"
                     /inference="COORDINATES: protein motif:HMM:NF037018.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75425.1"
                     /translation="MAAGFLFLLALAGFVWAPGSPRVQAAPPTAPTVVALPGDFDQQL
                     GCPGDWMPDCPNVRLNYDANDDVWQNVFTITASSPITYNYKAALNNSWTENYGLHAIP
                     NGPNIPLPLTQTTAVKFYYDDKTHWITDNATSVIAVAAGSFQSELGCAGDWDPGCLRS
                     WLQDIDGDGVYTFTTHALPPGTYEAKVALDESWNENYSANCAPGGANIPFEVATNGEG
                     VTFSYDSGTHCLIIASEQVGSLNTAMAHWITRDTIAWQVPCTPQDIYTLHYSPTAGLQ
                     LQPQGIAGGQTLSLTCDPTGLGPAILARYPYLSGYAALKLSQQDVGLVPGILKDQVAI
                     "
BASE COUNT          262 a          477 c          448 g          251 t
ORIGIN      
        1 ggcggggaca ccgctgcgga aaggaggtgt gccctggaga agtctggggc gggcgcccgc
       61 gcagagttag tcctggtttg tccccggcca tgcaggctgc cggagagaaa cggaccagcg
      121 cagtttcggt cattttgacc cctaaagcgg ggcggatcgc tccctgccgg cgctgcaatt
      181 gtccttggtg gggccaagtc cgagcaccat tgttcgtgcc gccgggcgat cagggttgtc
      241 gcgcctcact cgcccttgag cgggcgcgac aggttatgac ggctggggtc gtacgcatgt
      301 agtggactga acctggtgga gttggcccag atgggccgct ccatcctccg ggatgcgcgg
      361 cccatcgcgg gatcccaggc cggagtagta aagcttgctt caggaggata cccagatgtt
      421 tacacctcgc cggctcttgg cggccggttt cctgttcttg ctggccctgg cgggttttgt
      481 atgggcgccg ggcagcccgc gcgtccaggc ggctccgccc accgccccca ccgtcgtcgc
      541 ccttcccggc gactttgatc agcaactcgg ctgtcccggc gactggatgc ccgactgccc
      601 gaacgtccgc ttgaactacg atgcgaatga tgacgtctgg cagaacgtct ttaccatcac
      661 ggcgagctcg ccgattacct ataactacaa agccgccctg aataacagtt ggaccgagaa
      721 ttacggcctc catgcgattc ccaacggtcc caacatccca ctgccgctga cgcagaccac
      781 ggccgtcaag ttctactacg acgacaaaac gcactggatc accgacaacg caacgtcggt
      841 gatcgccgtg gcggccggca gcttccaaag tgagctgggg tgcgccggcg actgggatcc
      901 tggttgcctg cgctcctggt tgcaggacat cgacggcgac ggggtgtaca ccttcaccac
      961 gcacgcgctg ccgcccggca cctatgaggc caaagtggcg ctggacgaga gctggaacga
     1021 gaattacagc gcgaactgcg cgccgggagg agcgaacatc cccttcgagg tcgcaacgaa
     1081 cggcgaaggg gtcaccttca gctacgactc gggtacccac tgcctgatca tcgcgtccga
     1141 acaggtcggc agcctgaaca cggcgatggc ccactggatc acgcgcgaca ccatcgcctg
     1201 gcaggtgccg tgcaccccgc aggatatcta caccctccat tacagcccca cggcgggcct
     1261 ccaactgcag ccgcagggca tcgccggcgg ccagacgctc tcgctaacct gcgacccgac
     1321 gggcctcggt cccgccatac ttgccaggta tccgtacctg tccggctacg cggcgctcaa
     1381 actgagccaa caggatgttg gactggtgcc gggcatcctc aaggaccagg tggctatc
//
LOCUS       DASRPQ010001367         1162 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3623791, whole genome shotgun sequence.
ACCESSION   DASRPQ010001367 DASRPQ010000000
VERSION     DASRPQ010001367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3623791"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1162
                     /locus_tag="VFD73_15680"
     CDS             <1..>1162
                     /locus_tag="VFD73_15680"
                     /inference="COORDINATES: protein motif:HMM:NF012873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="condensation domain-containing protein"
                     /protein_id="HZI75426.1"
                     /translation="ALRRVMDRLVERHEALRTTFYVDEGQPVQRIGAVEDSRFALAEN
                     DLRGEGNARAELERLAAQEAGEGFDLQTGPLIRGRLIRVGEEEHVLLITMHHIVSDGW
                     SMGVLINELNVLYGAFLRGEEDPLAPLEIQYGDYAVWQRKWIEGERLRQQGEYWKRTL
                     GGAPGLLEVPMDRARPAQQDYAGGFVGLELEEKLTVGLSGLSRRHGVTQYMTLLAGWA
                     ALLARLSGQRDVVIGTPVAGRGRVEIENLIGLFINTLAVRVEMSSRMTVGELVLKVKE
                     QVIAAQQHQDIPFEQVIELLQPERSLAHSPLFQVMFAWQNAPQGTFKLPGLEVQPLRL
                     APYQVAKCDLTLWLQESGGRIEGGVGYATALFERGTVERYAGYLRRLLEGMVV"
BASE COUNT          226 a          230 c          495 g          211 t
ORIGIN      
        1 gcgcattacg acgggtgatg gaccggctgg tggagcggca tgaggcgctg cggaccacct
       61 tctacgtgga cgaggggcaa ccggtgcagc ggatcggggc agtggaggat agccggttcg
      121 cgctggcgga aaacgatttg cggggggagg ggaatgcgag ggccgagttg gagcggctgg
      181 cggcgcagga agcgggagag gggtttgatc tgcaaacggg acctctgatt cgtgggcggt
      241 tgatacgagt gggcgaagag gagcacgtgc tgctgatcac gatgcatcac atcgtgtcgg
      301 atggatggtc gatgggggtg ctgatcaatg aactgaatgt gctgtatggg gcattcctgc
      361 gaggggagga ggatccgctg gcgccgctgg agatccagta tggggattac gcggtgtggc
      421 agaggaagtg gatcgaaggg gagcggttgc ggcaacaggg ggaatactgg aagcgaacgc
      481 tgggaggagc gcctgggttg ctggaagtgc cgatggatcg ggcgcgtccg gcacagcagg
      541 attatgcggg agggtttgtg ggattggaac tggaggagaa gctgactgtg gggctgagcg
      601 ggctgagtcg acggcatggg gtgacgcagt acatgacgtt gctggcggga tgggcggcgc
      661 tgttggccag actgtcaggg cagcgggacg tggtgatcgg gacgccggta gcggggcgag
      721 ggcgggtgga gatcgagaat ctgatcgggc tgttcatcaa cacgctggcg gtgcgagtgg
      781 agatgagctc gaggatgacg gtgggggagt tggtgctgaa ggtgaaggaa caggtgatcg
      841 cagcgcagca gcatcaggac ataccgttcg agcaggtaat cgagctgttg cagccggagc
      901 ggagcttggc gcacagccct ttgttccagg tgatgttcgc atggcagaac gcgccgcaag
      961 gaacctttaa gcttccgggg ctggaggtac agcccctgcg attggctcca taccaagtgg
     1021 ccaagtgcga cctgacattg tggttgcagg aatcgggtgg acgaattgaa ggcggggtgg
     1081 gatatgcgac ggcgttgttt gagcgaggga cggtggagag gtatgcgggg tacctgcggc
     1141 ggttgctgga agggatggtg gt
//
LOCUS       DASRPQ010001368         1346 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1744503, whole genome shotgun sequence.
ACCESSION   DASRPQ010001368 DASRPQ010000000
VERSION     DASRPQ010001368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1346
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1744503"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..995)
                     /locus_tag="VFD73_15685"
     CDS             complement(<1..995)
                     /locus_tag="VFD73_15685"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HZI75427.1"
                     /translation="MLASLGGLVDGRVRLWRADAAHLQAIAGADPGWTLPLPDKAGEV
                     TTPEGRAWLEPIAGHPGAWLEVGGADLDTSRAAGRQVLPVVAALLEAERQRAHVAEEL
                     AGRYEEIDLLYAISEILGRTVRLEEAAQIIVREVSAVVGARRGSIMVYEESSRSLRTV
                     ASRGFDAAGLLPVSVDDDCSIAARVFREQRIITYDPTNPDSVAPDCGDIRGYRGDSFI
                     SVPICYAAPGTGLRCVGVINLTDRIGGDRFTLDDRKLVSAVANQIGAAVENARLVDRD
                     VEQQRLQRELELAHDLQLKLLPSPAVLQGDAEVAARCLPADSVGGDFYTFSRLGRG"
     gene            complement(1010..>1346)
                     /locus_tag="VFD73_15690"
     CDS             complement(1010..>1346)
                     /locus_tag="VFD73_15690"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI75428.1"
                     /translation="RHCLAGHEASPTIRFRLRVVLSEALSNAILRGNAEDRSKWVDVR
                     AELVPDSIRVYVTDEGPGFDPAAVPEPIRPEQLDEAQGRGLYLIRKLVDAVQFNDQGN
                     SICMILRRP"
BASE COUNT          240 a          476 c          412 g          218 t
ORIGIN      
        1 ccccggccca ggcgactgaa ggtgtagaag tcacccccga ccgaatcggc tggcaggcag
       61 cgtgcggcga cctcagcgtc gccctgcagc accgcgggcg agggtaacaa ctttagctga
      121 agatcgtggg ccagctccaa ctcacgctgc agccgctgtt gctccacgtc ccggtcgacc
      181 agacgcgcat tctccaccgc ggccccgatc tgattggcca cggcactcac cagcttgcgg
      241 tcgtccaggg tgaagcggtc gccgccgatg cggtccgtga gattgatgac gccgacgcag
      301 cgcagtcccg ttcccggagc ggcgtagcag atcggcacgc tgatgaagga gtcgccgcgg
      361 tagccgcgaa tgtccccgca atccggggcg accgagtccg gattcgtcgg atcgtaggta
      421 atgatccgct gctcccggaa tacccgtgcg gcaatcgagc aatcgtcatc caccgacacc
      481 ggcaggagtc cggccgcatc gaatccccgg gaggcaacgg tgcgaagaga ccgactcgac
      541 tcctcgtaga ccatgatcga tccccgtcgt gcgcccacta ctgcgctcac ttcgcgcaca
      601 atgatttgcg cggcttcctc caaccggacc gttcgcccca ggatttcgct gatggcgtag
      661 aggagatcga tttcctcgta ccgtcccgcc agctcttcgg cgacatgggc gcgctgccgt
      721 tccgcttcca gcaacgccgc aacgacggga agcacctgcc gccccgcagc gcgcgaggta
      781 tccaggtccg ccccaccgac ctcgagccaa gcgccgggat ggccggcgat cggctccagc
      841 caggcccggc cctccggcgt cgtgacctcg cccgctttgt ctggcagggg caacgtccag
      901 cccggatcag ctcccgcgat tgcctgcagg tgagcggcgt cagcgcgcca caatcggacc
      961 cggccgtcga ccagaccacc gagtgacgcc agcacctggc cgaggcgccc tacggccggc
     1021 gcaatatcat gcagatggag tttccttggt cattgaattg aacggcgtcc accagcttgc
     1081 gaatcagata cagcccgcgc ccctgagctt cgtccagctg ctcgggcctg attggttccg
     1141 gtactgcagc gggatcgaat cccggaccct catcggtgac gtacacccgg atcgagtcgg
     1201 gcaccagctc agcacgcaca tcgacccact tgctgcggtc ttccgcattg ccccggagaa
     1261 tggcattgct cagcgcctcg gagaggacca cgcgaaggcg gaagcgaatt gtcggactgg
     1321 cctcgtgtcc agccagacag tgtcgg
//
LOCUS       DASRPQ010001369         1666 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3319371, whole genome shotgun sequence.
ACCESSION   DASRPQ010001369 DASRPQ010000000
VERSION     DASRPQ010001369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1666
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3319371"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..830
                     /locus_tag="VFD73_15695"
     CDS             <1..830
                     /locus_tag="VFD73_15695"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI75429.1"
                     /translation="ICPTGSKLLPNGTRCTEPAGSICWRNGCVSLPHWARDQPRYTLI
                     RSGLKHVRRVLSCSRWVQRELAFNGVASEHLPLPVALPSPGFHRAPDPQPLFIYCGRL
                     TVEKGLPLLLRAFAKLVKEVPTAHLRLVGEGTQRPILERMAEAIGLAGSITFTGGVPA
                     AQVEDHLVDPWALVAPSLWAEPFGLVALEAIVRGIPVIASANGGLGETVENGVTGLLF
                     PNGDEEALLQQLNAVASGRAFSSHALPESIVNRVRESYALDGHRDRLRGIFAELIGG"
     gene            838..>1666
                     /locus_tag="VFD73_15700"
     CDS             838..>1666
                     /locus_tag="VFD73_15700"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HZI75430.1"
                     /translation="MNVLVTGATGFIGSHLVDRLLETGADVRALVRPAADASRLNGLG
                     VEVVRGDVSRVNDVERAVATRELVYHLAKAPSGSPWSILERVNVTGAANVVRSAARAG
                     VARVVHCSSTAVYGHCPGASLLVSEDTMEEPDTPYAWSKALGEKAAQSHIGRVSLVIA
                     RITSVLGPRCFRWLSVFRSVAARRFRLIGRGDGRHHLADVSDVVRGLLLCANSPAADG
                     RTYIIAGNEAITLRNLVQVITEELNVCGPSPRALPSAPFRGYLRLNQVAWEVTGTSLP
                     "
BASE COUNT          277 a          497 c          531 g          361 t
ORIGIN      
        1 ttatctgtcc aaccggatcc aagctgcttc cgaacggcac ccggtgtact gagccggctg
       61 gatcgatctg ctggcgaaac ggttgcgtaa gtctcccgca ctgggccagg gatcagccac
      121 gctacacttt gatccgctcg gggctcaagc acgttcgccg ggttctttcc tgcagccgct
      181 gggtgcagcg tgagctggcc ttcaacggcg tggcctcgga gcatctgcct cttccggtcg
      241 cgctgccttc cccaggcttc caccgtgcac ctgatcccca acccctcttc atctattgcg
      301 ggcggctcac cgtcgaaaag ggcttaccgc tgctgctgag ggctttcgcg aagctggtga
      361 aggaagtgcc cacggctcac ttgcgcctcg tcggcgaagg gacacagcgg ccaattctcg
      421 agcggatggc cgaggcaatc gggcttgctg gttccatcac gttcactggt ggggttccag
      481 cggcccaagt ggaggatcac ctcgtcgatc catgggccct ggtggcgcct tctctctggg
      541 ccgaaccatt cggtctggtg gcacttgagg caatagtcag ggggattccc gtgatcgcca
      601 gcgcaaacgg tggtctgggg gaaacggtcg agaatggagt gacggggctg ctgtttccta
      661 acggagacga agaagcactc cttcaacagc taaatgcggt agcgagcggg cgtgccttct
      721 ctagtcatgc actcccggag tctatcgtga atcgggtccg agaatcatat gcgctggatg
      781 gccaccgcga tcgtctccgt ggaattttcg ccgagctgat cggcgggtga ggtggcgatg
      841 aacgtgcttg tcaccggagc caccgggttc atcggctcgc acctggtgga tcggctcctc
      901 gaaaccggag ctgacgtgcg ggccctggtt cgcccggccg ctgacgcatc gcggctgaat
      961 ggcctgggcg ttgaagttgt aaggggtgac gtcagcaggg tgaacgatgt ggagcgtgcg
     1021 gttgccactc gtgagctggt atatcatctc gcgaaggcac cgagtggatc gccctggagc
     1081 atcctcgaga gggtcaacgt aaccggagct gcaaacgtcg ttcggtccgc agctcgcgct
     1141 ggcgttgccc gagtggtcca ttgcagcagt acagccgtgt atggccactg tcccggtgcc
     1201 tccctgctgg tctctgagga cacgatggag gaacccgata caccgtatgc ttggtccaaa
     1261 gcccttggtg aaaaggccgc gcagtcccat atcggccgcg tgtcgctcgt cattgctcgc
     1321 attacctcgg tactgggtcc gcgctgcttt cgatggttga gtgtgtttcg atcagttgca
     1381 gcgcgccgct ttcgactcat cggtcgtggc gacggtcgcc accatcttgc tgacgtctcc
     1441 gatgttgtcc gggggctcct cttgtgtgcg aactcgccag cggcggatgg ccgcacgtat
     1501 atcatcgcgg gaaatgaggc tatcacattg cggaacctcg ttcaggttat tacggaggag
     1561 ctgaacgtat gcggcccctc cccacgcgca ttgccaagtg ctccttttcg tggctacctg
     1621 cggctgaatc aggttgcctg ggaggtaacg ggcaccagcc tgcccc
//
LOCUS       DASRPQ010001370         1310 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1094172, whole genome shotgun sequence.
ACCESSION   DASRPQ010001370 DASRPQ010000000
VERSION     DASRPQ010001370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1310
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1094172"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(545..1195)
                     /locus_tag="VFD73_15705"
     CDS             complement(545..1195)
                     /locus_tag="VFD73_15705"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HZI75431.1"
                     /translation="MTELNHTRVVVVDDHAVVRNGITFSLLAFDDIEIVAEAGSGEEA
                     LMVCERVQPDVVLMDLMMPGMGGVAAMRELRERCPDARVIALTSFQEGSLVQEALQAG
                     ATGYLLKDVVVDELVKSLRLAHRGMPTLAPAAAQALVQTVAARMPRFGHDLTDREREV
                     LGLLAEGYSNQRIAEQLVITPATVKFHTRGIRSKLGTSSRTETVLVALQHHLVPAP"
BASE COUNT          232 a          424 c          405 g          249 t
ORIGIN      
        1 gctcagtcgt ggcatccagt ggcaagagtg acccgtgcgc ccgatcccct ctgcctctcc
       61 ttcgccagca gcccgtgatg tgtccggaca tctgtggggg aaggagaatg gcgatggatg
      121 gcggacggct cgccaatgga cgtgatcagc gagatggaca tggggcccgc accctccatg
      181 agatatacca ggcccatctc acctgtgatg cacagcgtag aacggtggac ggatgcgcgt
      241 ctacctgact ggggggcgta ttgtcggata gtgttcctct cggcccaagg gtgagtctct
      301 acctgactga cgggcgagtc aggcgagggt actgccgggc aatagtatga tctggcggcc
      361 actcctcaag acctattggc cgctcatctc agcgaaccag cgcgcatggt tccatcctga
      421 tcccgcgcga ttcgcgtcat gcccgcatac gaatgcccgg caatgctcgc atggtcgctc
      481 aggcatttgc gggcaagcgg atcgagagca ttgctggtct cgtgccctga ggagcttcag
      541 gagcttacgg agctggtacg aggtggtgct gtagcgcgac caggaccgtc tcagtgcggc
      601 tggaggtgcc gagcttggag cggataccgc gtgtatgaaa cttgaccgtg gcgggcgtga
      661 tcaccaactg ctcggcgatc cgctggttcg agtatccttc ggcaagcagc cccagcactt
      721 cccgctcgcg gtcggtgagg tcatgaccaa atcggggcat gcgtgctgcc accgtctgca
      781 ctagcgcctg ggccgcggcc ggcgccaggg tcggcatgcc gcggtgcgca agccgcagcg
      841 atttgactaa ctcgtcaacc acgacgtcct tgagcagata gccggtcgct ccggcttgca
      901 gggcttcctg caccaggctc ccttcctgaa aactcgtcaa cgcgatcacc cgcgcgtctg
      961 ggcagcgctc gcgcagctcg cgcatggcgg ccacgccgcc catgcccggc atcatcaggt
     1021 ccatcagcac cacatcaggc tggacccgct cacacaccat gagcgcctcc tccccactgc
     1081 ccgcttccgc tacgatctcg atatcgtcga aggccagcag ggagaacgtg ataccattcc
     1141 ggaccaccgc gtgatcatca acgaccacga cgcgggtatg attgagttcc gtcatcggat
     1201 agcctccttc cagggcctcc tctgtggccg cggcgagggt acggtgttgt gacctggggt
     1261 gccccgctga gctctaaggc tctcgcgcgc cgctactctt gacacactca
//
LOCUS       DASRPQ010001371         1331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_161836, whole genome shotgun sequence.
ACCESSION   DASRPQ010001371 DASRPQ010000000
VERSION     DASRPQ010001371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161836"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(598..>1331)
                     /locus_tag="VFD73_15710"
     CDS             complement(598..>1331)
                     /locus_tag="VFD73_15710"
                     /inference="COORDINATES: protein motif:HMM:NF018431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI75432.1"
                     /translation="VAQGHHQVTIDGMTRVQGPLQCLVLRGDEQVDVEVLEASIRRPY
                     LSVVLEIDPGLVRRVASDILAWRTTGGRTDIELGGAERACAYELHAVVIRAGRRIKCG
                     MDRHLLAPLYQREMVYWLLQSEHGPQVRALASAESATVGVSAVIAYARAHLAEPLSVT
                     KMAKLANLSTSAFAHQFRDATGRPPHQFLRDMRLSYARELLADTDLPVARISREVGYA
                     SPSHFISAFHTRYGVTPLAYSNIYA"
BASE COUNT          242 a          434 c          419 g          236 t
ORIGIN      
        1 actcgcggcg tcggccccgg agcagctccc tcaatctgtc gccgggacca gcgtgcacgg
       61 caaaggagtt ccgttgcctc tcgttcatgt cggcgtcgct accaaaggac ggccgggtca
      121 agtccgccat atgcagggtc catgagccag tgcacccagc atgtgtactg gccaacgcac
      181 ctagctggcc gacgacatgg tgccttgaac ctgtgcaagg ccaggtgcag ttcaagtcgg
      241 gagctaattt cgagtttgct gatggccttc cgtaacaggt ctcgggctgc tgagaagtcg
      301 ggcgccgatc tccacctcag acggaccgtt gcggtccagt cgggacggag cacctcctcg
      361 gcggacgccg ccacacggtg gatgctgtcg tcttcgagcc ccagttaccg cactgctaac
      421 gaggagcgag atccgcgtca cgaccatcac ggttacaccg cctgcaaggt tcggtgcacc
      481 gcgatagccg attcctgctg acctggtgcc catttcggtc gagtgcggtc cgctggtact
      541 cctgtgtcgc agcggcgggg cgccacgctg cgctgactgg cacgctgcag tctccgccta
      601 agcgtaaatg ttgctatatg ccagcggtgt cacgccgtaa cgagtgtgga acgcactgat
      661 gaagtgggag gggctggcgt agccgacctc tctggagatc cgcgcgaccg gcaagtcagt
      721 atcggcaagc agttcgcgag cgtagctcag gcgcatgtcc cgcaggaact ggtgcggcgg
      781 acggccggtg gcgtcgcgga actggtgtgc aaaggccgat gtgctcagat tcgccagctt
      841 ggccatcttt gtgacgctca gcggctccgc caggtgggct cgcgcgtacg cgataaccgc
      901 cgagacccca accgtggcgg actccgccga tgcgagagcg cgcacctgtg ggccatgctc
      961 ggattgcagc aaccagtaga ccatttcccg ctggtacagc ggcgccagta ggtgacgatc
     1021 catcccgcac ttgatgcggc ggccggcccg aatcaccacc gcatgcaact cgtaggcgca
     1081 cgctcgctcg gctccaccca actcaatgtc ggtccgaccc ccggtcgtcc tccacgccaa
     1141 gatgtcactg gccacgcggc gtactaaccc gggatcgatt tcgagcacga cggacaagta
     1201 ggggcgacga atggacgctt cgaggacctc gacgtccacc tgctcgtcac cgcgaagaac
     1261 cagacactgc agtgggccct gaacgcgcgt catcccgtcg atcgtcacct gatggtggcc
     1321 ctgggcaacg a
//
LOCUS       DASRPQ010001372         1412 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4227559, whole genome shotgun sequence.
ACCESSION   DASRPQ010001372 DASRPQ010000000
VERSION     DASRPQ010001372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1412
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4227559"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1119..>1412)
                     /locus_tag="VFD73_15715"
     CDS             complement(1119..>1412)
                     /locus_tag="VFD73_15715"
                     /inference="COORDINATES: protein motif:HMM:NF015674.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF308 domain-containing protein"
                     /protein_id="HZI75433.1"
                     /translation="AGVLSLTIVVAALFLAEGVLELVLAFRLRPQEGWAWVLLSGLLA
                     IAVGALIAADLPSSATWALGVLAGVNMLATGWSFAFLALAARRANTRAAAVAA"
BASE COUNT          285 a          435 c          463 g          229 t
ORIGIN      
        1 cagccgccgc ctataaatcg aagggccgtg ccgagagccc gcctgagcgc aggtgtgaga
       61 aaggcagcgc acagacagaa ctggggaccc ctcgaaaggg cgtgccgaag gcgagcctgg
      121 gcgcaacggt gagaagggaa cggcgcaagg aaccgacaga agtccacgat cctcaggcac
      181 cggacgagag agcaccgctg cggcttggac tgaacgccca cgtgttctca ctctccgaag
      241 tgcagcgggc aacgctccac cgggacgccg ttgaaggagc gccgagtaaa tcgggtcagc
      301 aacgtgaact ttacggtcct tcttatgttc cccaatatcg aaacgctatt gcgtggctga
      361 ggacaagtct gcatcgtgga cccgcggagc tacgaaatcg tcgacgtaat tccggtgtct
      421 gggcagacgg cagctcgtgg tgggcaatcg gggaggctgc acctgaccga ggaggaaaag
      481 caaatcgtgc ttcgcgaggt agaggtccgg caggggagca ccttgggcct cggttctttg
      541 gcagaggggc ccgatgtggc gcccaatgtg gaagttcgat gcttccccga ccaggtcgta
      601 cggcaaattc cgaagttaca aggccataaa tacctcacgg ccgaggacaa gatcgtcatt
      661 gtcgatccgc ggcgatcaaa ggtcgaagtg gtcaccgata accatcggag catgcaacac
      721 cggtgccttg ggtggcggcg gccgcgatct cgcaacctga gcctttctgg cgccgcgtcc
      781 cagagacggt agcgcagccc aagaatatcc gcggcccgcc gtggtcaaac ctggaccatg
      841 atcgctcgct gcagccatgc cctcgtctca tccaggttct aagtcctcac ccggcgcgga
      901 ttacggcccc cgtatccccc tcgaggaggc cggcgcagtc gcttggtgcc ccgccgaggt
      961 cgtggaggag atgaggactg ggcgccgagc ggtttgtgta gcgggcgggc gttgtggccc
     1021 tcgctctttg gccccgagag gtgcggctac gcgttgcgtt cagagctcat tgaagaccgg
     1081 gtccgggttc tccggtgtgc gggtccgcag ctccctggct aggctgcgac tgccgccgca
     1141 cgcgtgttcg cgcgccttgc cgcgagcgcc agaaaggcga agctccaccc ggtggcgagc
     1201 atgttgaccc cggccagcac acccagcgcc catgtcgccg agctaggcag atcggccgcg
     1261 ataagggcgc cgacggcgat ggccaagagc ccgctcagca aaacccatgc ccagccttcc
     1321 tgtggtcgta gcctgaaggc caggactaat tcgaggacgc cttccgccaa aaacaaggcg
     1381 gccactacga tggtcagaga taagacgcct gc
//
LOCUS       DASRPQ010001373         6401 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3319685, whole genome shotgun sequence.
ACCESSION   DASRPQ010001373 DASRPQ010000000
VERSION     DASRPQ010001373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6401
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3319685"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..349
                     /locus_tag="VFD73_15720"
     CDS             <1..349
                     /locus_tag="VFD73_15720"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI75434.1"
                     /translation="YLVGWDVCLLPFALNEATRFISPTKTLEYMAAERPIVSTPITDV
                     AEPYGDVVYLGSTPEEFLAACDAALGAAPEERARRAARMREVLAGTSWDVTVAAMEKL
                     IAEAVARKTTVAA"
     gene            369..1895
                     /locus_tag="VFD73_15725"
     CDS             369..1895
                     /locus_tag="VFD73_15725"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZI75435.1"
                     /translation="MLKPAQRLHTPAVPVVIIGAGPTGLSAAYHLGQDAILVEQADRV
                     GGWCRSIEDNGFTFDMAGHIMFSNDPYVHEMYQLLLGDNVHWQDREAWIFSKGVFTRY
                     PFQGALYGLPPDVIKECIVGAIEARFGSLNAKKPAADKGATSDYTGPERRGMFEPLMK
                     VNGGRKRTYTGAERRLSAHKGSPKNFEEFIYKVWGAGIAKHFAIPYNKKLWAVPLSEM
                     ETSWLGGRVPLPNLEEMIEGALSPSPKPMGPNARFGYPLRGGFQALMNGFVPRLAGEL
                     RLDTKVVSVSPSQHTVTLADGAVLPYEFLISTMPLPTLIRAIGSEAPADVRKAAAGLR
                     HVSVRCVNIGVGRENLTEKHWIYYPEDTVFHRIFVQGNASPYCNPPGGFGLTCEITYS
                     PAKPLPCDGDALIQRCIEDCHKVGIFRPDDPIWAANQVDMPVAYVVYDHDRARNVNLI
                     REWLSTKDIVLAGRYAEWEYYNSDHAFVAGKKAAEQVAELRRQGRYVSASAAMTATAH
                     "
     gene            1922..3193
                     /locus_tag="VFD73_15730"
     CDS             1922..3193
                     /locus_tag="VFD73_15730"
                     /inference="COORDINATES: protein motif:HMM:NF012457.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HZI75436.1"
                     /translation="MTEILRRRPEDFLWATGIEDTFVPQTRPGHRALDEYQLVGHYEH
                     WREDLALVRDLGLKLVRWGVPWYRLEPFQPGEFDWRWTDQVIPYMVHELGITPIIDLM
                     HYGCPFWLRREFASAEYPKAVADYAAAFARRYAGLVRWYTPLNEPIVTALFCGQRGLW
                     PPYLRSESGYVQIMLQVIEGIIETSAALRAVEPNAILVHVEATGLSRTAREDLHAVAK
                     EEQSRTFLAYDLLTGRVTPDHELFPWLVRNGASPDRLAAIAARPVPFSLMGLNFYPQW
                     STTQLYIDRRGRLAYQPVEQDGAGFSSLIENYYRRYGLPIMVTETSAKGNESVRARWL
                     EASVAAIRVLRGRGIPVLGYTWFPLFTMIDWKYRFGRGPLEEYRLDLGLYAMDGDVRW
                     RATPLVEQFRSYISDSEAAIGNLGVEQSLSA"
     gene            3267..4433
                     /locus_tag="VFD73_15735"
     CDS             3267..4433
                     /locus_tag="VFD73_15735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75437.1"
                     /translation="MTEVGSATRKGGSQLLQSFWIGGFESATHINRAGVRIDMVSATQ
                     HDLLVDEDYARLADWGIRTVREGARWHLIETSGGYDFSTLKPTLQAARRHGIQIIWAL
                     CHYGWPDDLDILGRGFVDRFARYCSAAARFITDHSDGVRFYTPINEISFLSWAAGEKA
                     YIHPHRKDAGRPIKHQLVRAAIAGMEAIWAVDPAARMMHTEPLIHVLTPKGRTDLARA
                     AADQRAAQFEAWDMLAGAMDPELGGHPRYLDVVGVNYYHANQWEHPDVRLRWEDTPRD
                     PRWFPFSLLLAEVYYRYWRPVVVSETSHFGEGRGRWIEEVADEVARAREAGVPVEGLC
                     IYPIIDRPDWDDPNHWHHSGLWDLGRHDDGRLERRLSPDYAEALRRAQARIRSS"
     gene            complement(4430..>6401)
                     /locus_tag="VFD73_15740"
     CDS             complement(4430..>6401)
                     /locus_tag="VFD73_15740"
                     /inference="COORDINATES: protein motif:HMM:NF014850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /protein_id="HZI75438.1"
                     /translation="QDYYPDLIYTPFGDAELEEQFRKAKHMGLNCLRTHIKITDPRYY
                     DAADKVGLLIWTELPNWQELTEAAKRRAKETLFGMVERDWNHPSIIIWTIVNENWGVD
                     LAVNTGHRAWLADMYSELKSLDPHRLVVGNSPCFTNFHVVTDIEDFHNYYAMPDHYKK
                     WKEWVQTFASRPPWTFAHVYESIESWREYIRDPWNPIPRQPAPEVRRRGSEPMVVSEF
                     GNWGLPDVGKLRECYGGREPWWFETGIEWGDGVVYPHGIEQRFKAFHLDKVFPTLADL
                     AAASQRMQFTALKYQIEQMRRHPTIVGYVITEFTDVHWESNGLLDMCRNPKSFYDVIG
                     QVNSPDAIVPTDWDRIAFWEGERCEVRLALSHFSSLDLRNCRLEWQLDQWPEIGGVFD
                     GVTPERAQLTNVGTVVFEVPRFERPTRARLEMRLLSAGGELVTRNHHELYFFPRFDAP
                     SRELRLSVPGLPRLSARLAGMGYELVDEAAADLVVVERMTDELRWYVQNGGRVLWLAE
                     QPESQQAHLGSISIAQRHGRSWQGDWASSMSWIRQDKVFGDIPSGGTVDFAFADLTPE
                     TVIVGLTPRDFAANVHSGLFVGWVHHVVALVAERPIDRGRLMICTYPLREHLGVHPVA
                     SIMMRDLIARTARSLSGVERPAAVNRPPVTMS"
BASE COUNT         1168 a         2030 c         2016 g         1187 t
ORIGIN      
        1 ctatctggtg ggctgggatg tgtgcctcct tccgttcgcg ctgaacgagg ccaccaggtt
       61 catcagtccc accaagacgc tggaatacat ggcggccgag cgtcccatcg tgagcacccc
      121 gatcactgac gtggcggagc catatggaga tgtggtgtat ctggggtcca cgccggaaga
      181 atttctggcc gcctgtgatg ccgcgctcgg agctgccccg gaagaacgcg ctcggcgcgc
      241 cgcacgaatg agagaggtcc tggccggcac ttcgtgggat gtcacggtag cagcgatgga
      301 gaaactcata gccgaagcgg tggcccgaaa gacgaccgtt gcggcttagc atttgaaagg
      361 attcgacctt gctcaagcca gctcagcgtt tgcatacacc ggcagttccc gttgtcatca
      421 tcggcgccgg ccccaccggg ctgagcgccg cgtatcactt gggtcaggat gcaatcctgg
      481 tggagcaggc tgaccgggtc ggcggatggt gccgttcgat cgaggacaac ggcttcacct
      541 tcgatatggc cggtcacatc atgttctcca acgatcccta cgttcacgag atgtatcagt
      601 tgctgctggg cgacaacgtc cactggcagg atcgggaggc gtggatcttc agcaagggag
      661 tctttactcg gtaccccttc cagggagctc tctacgggct tccgcccgac gtgatcaagg
      721 aatgtatcgt cggagcgatc gaggcccggt tcggcagtct gaacgcgaag aaacctgcgg
      781 cggataaagg cgccaccagc gactacaccg gccccgaacg gcggggaatg ttcgaaccgc
      841 taatgaaggt gaacggcggc cggaagcgca cgtataccgg ggccgagcgc aggctcagtg
      901 ctcacaaggg cagtcccaag aatttcgagg agttcatcta taaggtctgg ggtgccggca
      961 tcgccaagca ctttgccatt ccctacaaca agaagctctg ggctgtcccc ctgtcggaga
     1021 tggagacctc ctggctgggc gggcgggttc cgcttccaaa tctcgaggag atgatcgagg
     1081 gggctctctc gccctcgccc aagccgatgg gaccgaacgc acggttcggc tatcccctgc
     1141 gcggtgggtt ccaggcgttg atgaatgggt ttgtgccgcg actcgcgggc gagctccggc
     1201 tggataccaa ggttgtctcc gtgtcgccct cgcagcatac ggtcacgctc gctgacggcg
     1261 ccgtgctacc ctacgagttt ctgatcagca ccatgccgct gccgactctg atacgggcca
     1321 tcggaagcga ggccccggct gatgtacgga aagctgcggc gggtcttcgc cacgtctcgg
     1381 tgcgctgcgt caatatcggg gtcggacggg agaacctgac cgagaagcat tggatttact
     1441 atcccgagga cacggtgttc caccggatct tcgtgcaggg caatgccagt ccctactgca
     1501 acccgcccgg agggttcgga ttgacctgcg agatcaccta ttcgccggca aagccgcttc
     1561 cctgcgacgg cgacgccctg atccagcgct gcatcgaaga ctgccacaag gtggggatct
     1621 ttcgtccgga tgatcccatc tgggcggcga accaggtgga tatgcctgtg gcctacgtgg
     1681 tctacgacca cgatcgggcc cggaatgtga acctgattcg ggagtggctg tccaccaagg
     1741 acatcgtgct cgccggtcgc tacgccgaat gggagtacta caattccgat cacgcgttcg
     1801 ttgccggcaa gaaagcggcg gaacaggtgg cggagctccg tcggcaaggg cgatacgtca
     1861 gcgcatctgc ggccatgacg gccacggccc attaagagcc ggtcgtattt actcttcact
     1921 gatgacggaa atcctccgcc gacgacctga ggactttctg tgggccaccg ggatcgagga
     1981 taccttcgtc ccccagaccc gtccgggtca tcgagcgctg gacgagtatc agctggtcgg
     2041 gcactacgag cactggcgcg aggatctggc gctggttcgg gatctcgggc tgaagctggt
     2101 ccgctggggt gtgccctggt accggctgga gccatttcag cccggcgagt tcgactggcg
     2161 ctggaccgac caggtgatcc cctacatggt ccatgaattg ggcatcacgc ccatcatcga
     2221 cctgatgcac tacggctgcc ctttctggct gcgacgagaa ttcgccagcg ccgaatatcc
     2281 caaggcagtc gctgactacg ccgccgcctt tgctcgccgc tatgccgggc tggtccggtg
     2341 gtataccccg ctcaacgaac ccatcgtcac cgcgctcttc tgcggccagc gcggactctg
     2401 gccgccatac ctgcggagcg agagcgggta cgtgcagatc atgctccagg tcatcgaagg
     2461 gatcatcgag accagcgccg ctctgcgtgc cgtagagccc aatgccatcc tggtgcatgt
     2521 ggaggccacc ggattgagcc gcaccgcccg ggaggatctc catgctgtcg ccaaggagga
     2581 acagtcacgg accttcctgg catacgacct cctgaccggc agggtgacgc ccgatcacga
     2641 gctgtttccc tggctggtcc gcaatggcgc gtcgcccgac cggctcgccg ctatcgccgc
     2701 ccgaccggtg ccgttcagcc ttatgggcct caatttctac ccgcagtggt ccacgaccca
     2761 gttgtacatc gaccggcgag gacggctggc ctatcagccg gtggaacagg acggggcggg
     2821 cttcagcagc ctcatcgaga actactatcg ccgctacggt ctgccgatca tggtgacgga
     2881 gaccagcgcc aagggaaacg agtcggtgcg ggcccgctgg cttgaagcat cggtggccgc
     2941 catccgggta ttgcgcggac ggggaatacc ggtcctcggc tacacctggt ttccgctgtt
     3001 cacgatgatc gactggaaat accgcttcgg ccgcggcccg ctggaagagt accgcctgga
     3061 cctgggtctg tatgccatgg acggcgacgt gcgatggcgg gcaaccccgc tggtggagca
     3121 gttccgcagc tacatcagcg actctgaagc ggcgatcggc aacctgggcg tcgaacagag
     3181 tctctccgcg tagtatgcac tcgcgctcca gctcttctca ccggcgggtc tccgaatccc
     3241 gcgaacccta ccctgcatcc cacgagatga cggaagtagg cagcgccacc cggaagggcg
     3301 ggtcccagct cctccagtcg ttctggatcg gaggcttcga gtccgccact catatcaacc
     3361 gggccggggt gcgcatcgac atggtctcgg ccacgcagca cgatcttttg gtcgacgagg
     3421 actatgcccg gctggcagac tggggaattc gcaccgtgcg ggaaggcgcc cgctggcatc
     3481 tgatcgaaac cagcggaggc tatgacttct ccaccctaaa gcccacgctg caagcggccc
     3541 gccgccacgg catccagatc atctgggcgc tctgtcacta cggctggccc gacgatctgg
     3601 atattctcgg ccgcggtttc gttgaccggt ttgcgcgata ctgcagtgcc gctgcccggt
     3661 tcatcaccga tcacagcgac ggcgttcgct tctacacacc gatcaacgag atctcgttcc
     3721 tgtcctgggc tgcaggcgaa aaggcgtaca tccatcccca ccgcaaggac gccggacgac
     3781 cgatcaagca tcagctggtc cgggccgcga tcgccggcat ggaggcaatc tgggccgtgg
     3841 acccggccgc gcggatgatg cacactgagc cgctcattca cgtgctgaca ccgaagggac
     3901 gcactgatct tgcccgggcc gcggcggatc agcgcgcggc acagttcgaa gcgtgggaca
     3961 tgcttgccgg agcgatggat cccgagttgg gtggacaccc ccgttacctc gatgtggtgg
     4021 gagtcaatta ctaccacgcg aaccagtggg agcacccgga tgtccgcctg cgatgggaag
     4081 acacgccgcg cgatccccga tggtttccgt tcagcttgct cttagcggag gtgtactatc
     4141 gctattggcg accggtggtg gtgagtgaga cgagccactt cggagaggga cgcggacgat
     4201 ggatcgagga agtggcggat gaggtggccc gtgcccgtga ggccggcgtg ccggtggaag
     4261 gtctttgtat ttacccgatc atcgaccgac ccgactggga cgatcccaat cactggcacc
     4321 atagcgggct gtgggacctg ggacggcacg atgatggacg actcgagcga aggctcagcc
     4381 ccgactacgc ggaagctctg cgccgagccc aggctcgaat ccggtcctcc taactcatcg
     4441 ttactggtgg ccggttaacg gccgctggtc gctccactcc gctgaggctc cgtgccgtcc
     4501 gggcgatcag atcccgcatc atgatgctcg ccaccggatg gacccccagg tgctcccgca
     4561 acggataggt gcagatcatc agccgcccgc ggtcgatcgg gcgttcggct acgagcgcca
     4621 cgacatggtg cacccacccc acgaacaacc cggagtgaac gttggccgcg aagtcgcggg
     4681 gagtcagccc cacgatgact gtttcgggcg tgagatcggc aaacgcaaag tcgaccgttc
     4741 ccccgctcgg gatgtcgccg aagaccttgt cctgccgaat ccagctcatg ctgctggccc
     4801 agtctccctg ccagctgcgc ccgtgccgct gggcgatgct gatcgagccg aggtgggcct
     4861 gctgggattc cggctgttcc gccagccaca gcacgcgccc gccgttctgg acgtaccagc
     4921 ggagctcatc ggtcattcgc tcgaccacca ccaggtcggc agcggcctcg tccaccaact
     4981 cgtatcccat gccggccaac ctggcggaaa gcctcggcag ccccggcacc gacaggcgaa
     5041 gctcgcgaga cggtgcatcg aaccggggaa agaaatacag ctcgtggtga ttcctggtca
     5101 ccagctcgcc acccgcgctc agcagccgca tttccaggcg cgcgcgggtc ggccgctcga
     5161 accgcggcac ctcgaacacc accgtgccga cgttggtgag ctgcgcccgt tccggcgtca
     5221 cgccatcgaa gacgcccccg atctccggcc actgatcgag ctgccactcg aggcggcagt
     5281 ttctcaggtc gagagaagag aagtgagaca aggcgagcct cacttcgcag cgctctccct
     5341 cccagaacgc gatgcggtcc caatcggtcg gaacgatggc gtcgggactg ttcacctgtc
     5401 cgatgacatc gtagaacgac ttcgggttgc gacacatgtc gagcaggccg ttgctctccc
     5461 agtgcacgtc ggtgaattcc gtgatcacgt acccgacgat ggtggggtgg cgtcgcatct
     5521 gctcgatctg atacttgagc gcggtgaact gcatccgctg gcttgccgcc gccagatcgg
     5581 ccagggtggg aaagaccttg tccaggtgaa acgccttgaa ccgctgctcg atcccgtggg
     5641 ggtagacgac cccgtctccc cattcgatcc cggtctcgaa ccaccaaggc tcccgtccgc
     5701 cgtagcactc cctcaacttg ccgacgtcgg gtagccccca gttgccaaac tcggagacga
     5761 ccatgggctc gctgccgcgg cggcggactt cgggtgcggg ctggcgcgga atcggattcc
     5821 acggatcacg gatgtattcc cgccaggact cgatgctctc gtagacatgg gcgaaggtcc
     5881 agggcggacg gctggcgaag gtctgcaccc actccttcca cttcttgtag tggtccggca
     5941 tcgcgtagta gttgtgaaaa tcctcgatgt cggtgaccac gtgaaagttg gtgaagcagg
     6001 gagaattccc gaccaccagc cggtgcggat ccaggctttt cagttcggag tacatgtccg
     6061 cgagccaggc gcggtgtccc gtattgaccg ccaggtcgac tccccagttc tcgttgacga
     6121 tggtccagat gatgatcgaa gggtgattcc agtctcgctc caccatgccg aacagcgtct
     6181 ctttggcgcg ccgcttggcg gcttcggtca gctcctgcca gttggggagc tcggtccaga
     6241 tcaagagacc gactttgtcg gcggcatcgt agtagcgtgg atccgtaatc ttgatgtggg
     6301 tgcgaaggca gttgagaccc atgtgcttcg ccttccggaa ctgctcctcc agctccgcat
     6361 ccccaaaggg agtgtagatc aggtctggat agtagtcctg g
//
LOCUS       DASRPQ010001374         1087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2695383, whole genome shotgun sequence.
ACCESSION   DASRPQ010001374 DASRPQ010000000
VERSION     DASRPQ010001374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2695383"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1087)
                     /locus_tag="VFD73_15745"
     CDS             complement(<1..>1087)
                     /locus_tag="VFD73_15745"
                     /inference="COORDINATES: protein motif:HMM:NF013570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alanine--tRNA ligase-related protein"
                     /protein_id="HZI75439.1"
                     /translation="FGDYFKREAIAFAWEFVTGSAYLGIAPERLRVTVHHTDQEARML
                     WREVAGLPDHRIYGLGDQDNFWQMGDTGPCGPCSEIFVDLEPRGQHGSGEAEQVLSQA
                     DFERLAEEGRFLEIWNLVFMQFDRSLDGTLTPLPKPSVDTGAGLERIAAVMQNEDDNF
                     HTDLFLPLINRVGDLVGRSYDRNAENRASYRVLADHARAVSFLLADGVYPSNDGRGYV
                     LRRILRRAVRHAWLLGRREPTLAPLTDVVVAEMGSVYPELSRRAAYIHEVTETEERRF
                     LETIEGGLKRLEEIFASGSRVIPGADAFKLYDTFGFPIDLTQIIAGERGVDVDLAGFE
                     QSLEQQRKRSRDARITPGTGTRVPPGKA"
BASE COUNT          193 a          357 c          336 g          201 t
ORIGIN      
        1 gccttgcctg gcggaacccg ggttccagtt ccaggggtga ttcgagcatc gcgcgagcgc
       61 ttccgctgct gctccagtga ctgctcgaac ccggccagat cgacgtccac gccccgctct
      121 cccgcgatga tctgggtgag gtcgatggga aagccgaacg tgtcgtagag cttgaaagcg
      181 tccgcaccgg gaatcaccct cgagcctgag gcgaaaatct cctccagccg cttgagacct
      241 ccctcgatgg tctccaggaa tcgtcgctct tctgtctcgg tgacctcgtg aatgtaggca
      301 gctcgtcgcg acagctccgg atacacggag cccatctcag ccaccaccac gtcggtcagc
      361 ggtgcgaggg tcggttcgcg ccgccccagc agccatgcgt ggcgtacggc gcggcggagg
      421 atgcgccgca gcacgtaccc acgcccgtcg ttgctgggat agactccgtc ggcgagcagg
      481 aagcttaccg ccctcgcgtg gtcggccaga acccggtaag aggcgcggtt ctccgcattc
      541 ctgtcatacg agcggccgac caggtcgccg actcgattga tgagcggcag gaacagatcg
      601 gtgtggaagt tgtcgtcttc gttctgcatc accgcggcga tgcgctccag gccggcgccg
      661 gtatcgaccg acggcttggg cagcggcgtg agcgttccgt cgagcgaacg atcgaactgc
      721 atgaagacca gattccatat ttcgagaaag cggccttctt ctgccagtcg ctcgaaatcg
      781 gcctgggaga gcacctgctc cgcttccccg ctgccatgct gccccctggg ttccagatcc
      841 acgaagatct cgctacaggg tccgcagggc ccagtgtcgc ccatctgcca gaagttgtcc
      901 tggtctccca ggccgtagat cctgtggtcg ggaagtcctg cgacctcccg ccacaacatc
      961 cgggcttcct gatcggtgtg atgtaccgtc acccgaagac gttcgggagc aatgccgagg
     1021 taggccgaac cggtgacgaa ctcccaggca aacgcgatag cctcgcgttt gaagtagtcg
     1081 ccgaacg
//
LOCUS       DASRPQ010001375         1053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2059787, whole genome shotgun sequence.
ACCESSION   DASRPQ010001375 DASRPQ010000000
VERSION     DASRPQ010001375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2059787"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..655
                     /locus_tag="VFD73_15750"
     CDS             <1..655
                     /locus_tag="VFD73_15750"
                     /inference="COORDINATES: protein motif:HMM:NF013087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HZI75440.1"
                     /translation="GTPAFQAAFGAPLFDYLGRDLEAGNTFNAAMTDYSTLVAHAVLL
                     AYDFSDTGWLVDLGGGCGGLLTSIMRMYPEMAGTLFDTPAVIAAAERHLEVAPGGDRR
                     SLVPGNFLEAVPPGPDVYLMSGVVHDWDDERAVRILANCRASMARTGRVLVVECVVPD
                     GDENSFSTLLDLNMLVMNGGRERTQAEFQELFDAAGLRITRVLPTLSPLSVVEGALP"
     gene            652..>1053
                     /locus_tag="VFD73_15755"
     CDS             652..>1053
                     /locus_tag="VFD73_15755"
                     /inference="COORDINATES: protein motif:HMM:NF016089.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HZI75441.1"
                     /translation="MTDRIRNPAVSIALLRIVVGLYFAKALVTKLSVVLVGGFVPLPE
                     TSARWLATMPHIVARQASANPFPFYKQFLEGVVLPHATLFAHLTAWGEAAVGVGLTLG
                     LLTPIAALVGLFLVMSYGLATQWMSPEQRGFH"
BASE COUNT          171 a          315 c          353 g          214 t
ORIGIN      
        1 gggcacgcca gccttccagg cagccttcgg ggcaccgctg ttcgattatc tgggacgcga
       61 cctcgaggcc gggaacacgt tcaatgcggc gatgaccgat tactcgaccc tcgtagcgca
      121 cgcggtcctc ctggcctacg acttctcgga caccggctgg ctggttgacc tcggaggagg
      181 atgcggggga ctcctgacca gcatcatgcg gatgtatccg gaaatggcag gaaccttgtt
      241 cgacacgcct gccgtaattg ccgccgccga aaggcatctg gaggtcgccc caggtggcga
      301 ccgccgctct ctggtcccag gcaattttct ggaggcggtg ccaccggggc cggatgtcta
      361 cctgatgagc ggtgtggttc acgactggga tgacgagcgc gccgtaagaa ttctcgcgaa
      421 ctgtcgagcc tccatggctc ggacgggccg agtcctggtc gtagaatgcg tagttccgga
      481 cggagatgag aactccttca gcacgttgct ggacttgaac atgctggtca tgaatggggg
      541 ccgtgaacgg acccaagcgg agtttcagga gttgtttgac gccgccggtc tgcgaataac
      601 gcgggtctta ccgaccctgt cacccctgag tgtcgtcgaa ggtgcgctcc catgactgat
      661 cggatacgga accccgcggt gtccatcgcg cttctccgaa tcgtggtcgg cctgtacttc
      721 gccaaggcgc tggtcacgaa gctctcggta gtgctggtgg gtggcttcgt gccgctgcct
      781 gagacctcgg cccgctggct cgcgacgatg ccgcatatcg tggccaggca ggcgtcggcc
      841 aaccccttcc cgttctacaa gcagttcctc gagggcgtgg tgttgccgca cgcgaccctg
      901 ttcgcccacc tgacggcatg gggtgaggcg gccgtcggag ttgggctgac gttgggattg
      961 ctgacgccga tcgcagcgct ggtggggctg tttctggtga tgagctacgg attggccacg
     1021 cagtggatgt cccccgagca gcgagggttt cac
//
LOCUS       DASRPQ010001376         1601 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4555170, whole genome shotgun sequence.
ACCESSION   DASRPQ010001376 DASRPQ010000000
VERSION     DASRPQ010001376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1601
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4555170"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..595)
                     /locus_tag="VFD73_15760"
     CDS             complement(<1..595)
                     /locus_tag="VFD73_15760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75442.1"
                     /translation="MDLTRYDRTPTLTPAEHAALVALGWEVRRGRGHDLQRLEWVTIA
                     RLVHPLDDARRSVFTPDNPYHHRSALDAVGIILHACGTTRQAFWAWSPATWIDVVLTA
                     SQQAFQRAYPGWIDGAVRPYLVAMAYLLDCFAAFELLGPFNRLALAHRVFGPTRVQQA
                     VDPILTTLRTWGYHSARHTAEVPGLVSALLLHNRSPHL"
     gene            complement(661..1371)
                     /locus_tag="VFD73_15765"
     CDS             complement(661..1371)
                     /locus_tag="VFD73_15765"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HZI75443.1"
                     /translation="MNPVGRGRYTAGKGFGGTRAKGLIPRFTKLPWIPTDAQWQMILG
                     VARQERMRNRMMLALAYDAGLRREELCTVRSDDIDPAHRTIRIRAEMTKGRRERVVPY
                     SAATAVLLHAYLVHRRTLSMARGPLFLSESHRNRAKPITLWTWSKVIRRLALRANVPQ
                     FSTHTLRHLCLTDLARAGWELHAIATFAGHRNLATTLQYIHLSGRDLAEKLTRGMAQI
                     HTWRAQTLAEGHGEGGQA"
     gene            complement(1419..>1601)
                     /locus_tag="VFD73_15770"
     CDS             complement(1419..>1601)
                     /locus_tag="VFD73_15770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75444.1"
                     /translation="NQALHQRRLRIEHVNSSVKRCRIVKDRIRLWKEGVRDLVMELCC
                     ALHNFRVRLNPWLPMI"
BASE COUNT          314 a          496 c          511 g          280 t
ORIGIN      
        1 ccagatgcgg actgcggtta tgcaggagca gggcactcac gagcccaggg acctcagccg
       61 tatggcgggc cgagtgatag ccccaggtcc gcagggttgt caggatcgga tccacggcct
      121 gctggacgcg cgtagggcca aacacacggt gcgccagggc cagacgatta aacggcccca
      181 gcaactcaaa cgccgcaaag cagtccaaca gataggccat ggctaccagg tatggacgga
      241 cggcgccatc gatccacccg gggtaggcac gctgaaaggc ctgttgcgac gcggtgagga
      301 ccacgtcaat ccaggtggct gggctccacg cccagaaggc ctgccgcgtc gtgccgcagg
      361 catgcaaaat gatgcccacc gcatcgaggg cgctgcggtg atggtaagga ttatctgggg
      421 tgaacacgct ccgccgggca tcgtctagcg ggtggaccag tcgggcaatg gtcacccact
      481 ccaggcgctg cagatcgtga ccccgcccgc gccggacctc ccacccgagt gccacgaggg
      541 ctgcgtgctc agcgggggtg agcgtcggtg tccggtcgta gcgtgtcaga tccatcggcc
      601 attgccacca cgacggctcg tgagacgatg cgtgtactgc gacagcgtgg acggttgaca
      661 ttacgcctgc cctccttctc catgcccctc ggccagcgtc tgggcgcgcc aggtatggat
      721 ctgcgccata ccccgggtca gtttctcggc caagtcccgg cctgacaggt ggatgtattg
      781 aagggtggtg gccagattcc gatgaccggc gaacgttgca atggcatgga gttcccaccc
      841 cgcgcgagct agatccgtca ggcacagatg ccgcagcgta tgcgtactga actgggggac
      901 attggcgcgc agcgcaaggc gccggatgac tttggaccac gtccacaacg tgatcggctt
      961 agcgcggttg cgatgggact cagacaagaa cagcggccca cgggccatac tgagtgtgcg
     1021 tcgatgcacc agatacgcgt gcaacaacac ggctgtcgca gcggagtaag ggacgacccg
     1081 ttcacgccgt cccttggtca tctcggcgcg aatgcggatc gtgcggtggg cggggtcgat
     1141 gtcgtcactc cgcacggtac acagctcctc tcggcgtagg ccggcatcgt aggccagtgc
     1201 gagcatcatg cgattgcgca tccgctcctg acgcgccacg cccaagatca tctgccactg
     1261 ggcatcggtg ggaatccacg gcaacttggt aaaccgtggg atgagccctt tggcacgcgt
     1321 gccgccaaag cccttgccag cggtgtagcg cccacgaccg acaggattca tctcacgctg
     1381 gacttcttcc acgaggtaat cgtatgagtt tatcctgatt aaatcatggg taaccaaggg
     1441 ttcaggcgca cccggaagtt gtgcagagca caacagagtt ccatcacgag atcgcggacg
     1501 ccctccttcc acaggcggat ccggtctttc acaatacggc agcgcttgac actactgttg
     1561 acgtgctcga tccgtagccg ccgctggtgg agcgcttgat t
//
LOCUS       DASRPQ010001377         1021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2975351, whole genome shotgun sequence.
ACCESSION   DASRPQ010001377 DASRPQ010000000
VERSION     DASRPQ010001377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2975351"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(5..220)
                     /locus_tag="VFD73_15775"
     CDS             complement(5..220)
                     /locus_tag="VFD73_15775"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI75445.1"
                     /translation="MEIFAQRIRERARELGLSDAEVARRAGLSERRYGYYSTGEREPN
                     LATLVRICEVLAATPNDLLLAKGKPPV"
     gene            complement(557..682)
                     /locus_tag="VFD73_15780"
     CDS             complement(557..682)
                     /locus_tag="VFD73_15780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75446.1"
                     /translation="MALPIHDGTDALIRAVGCLTLANIRGSNQTTGLGVRVAPLL"
BASE COUNT          184 a          333 c          296 g          208 t
ORIGIN      
        1 gggattacac aggcggcttg cctttggcca ggagcaaatc gttcggggtc gcagccagca
       61 cctcgcaaat ccgcaccaag gttgccaggt tcggctcgcg ctcccccgtc gaatagtaac
      121 cgtatcggcg ctcgcttaac ccggcgcggc gcgccacctc cgcatccgag agtcccagct
      181 cccgcgcccg ctcccgtatc cgttgggcaa aaatctccat gcgaacattc tgttcgccgg
      241 ggatgcgcca cgcccaggaa ggttatgttc tccgttaatg agactgaaat gttctctcgc
      301 cagattgagg aggcgggaaa catacgaggt cggtatgtta aagcctacga tcctctacgt
      361 ggtcctctct gtcgcgttgc tgaccggctg cgccaactcc ccacaaacac gcacggcggc
      421 ggcttccgat tgcggtttcc acttcaccgg cggctctggt ctgctcggcc tgatgggagc
      481 tatgggagca ttcgagcggc cggccggacc agattgccgg cgtccagccc cagccgggcg
      541 ccaaccgccc cagctcctag aggagggggg cgacgcggac gcccagtccg gtggtctggt
      601 tgctgccccg aatattggcg agggtcagac agcctacagc ccgaatgagt gcatcggtgc
      661 cgtcgtgaat gggcaatgcc atgggtcaat cctgcctgac tacagccgcc ctcacccgac
      721 ttgctacggc cagatgctga acggcatgtg taccgggccg atgttttgac cgaatgccca
      781 ccgaaacacg gcctaggaga tcctgcctga ccaggttagc ccttttcgct gcgttggcag
      841 gcttggccac catctgccgc acatctggtg ggcacacgct gcaatatcag cgggtccctc
      901 tcaatccgcc ggcggtactg atcttgctac gtggtccgat cataccgggt gatctcaatc
      961 gatttctcgc tttcttcgaa gcgatgccca ataccgatcg cattaccgcg cttggtctgg
     1021 a
//
LOCUS       DASRPQ010001378         1534 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4555196, whole genome shotgun sequence.
ACCESSION   DASRPQ010001378 DASRPQ010000000
VERSION     DASRPQ010001378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1534
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4555196"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1168
                     /locus_tag="VFD73_15785"
     CDS             <1..1168
                     /locus_tag="VFD73_15785"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HZI75447.1"
                     /translation="AEGYPPGARPQESSALRVCVRPSEVSSTTVSPPSLSVIVPVRNG
                     EQYLEHSLAALSDSELPRAQWELIVVDDSSQDRSVELATPYADRLVRIANGPLGPGVA
                     RNRGAAIARGAILTFVDADVCVHRDALGRIVETFTHDPSVSAVFGAYDSRPSAASLVS
                     QYRNLLHRYVHERDAGEAVTFWAGCGGVRAAVFSGCGGFDETEHSKSSIEDIQLGYRM
                     SSSGYRIRLQPEIQGTHLKRWTLGNMIRTDLFGRGLPWVRLLLRGNIRPAATLNLRPS
                     EQMCTVLVALGLFALVIWVVSGDRTALGVAGAAVLAMLAANAPLLAWFGRQRGWWFVV
                     QVIPLRVLYYALNAIAVIGGLVAFAREQQRRPSQDDKSSAPTRGAPSKRAAGAG"
     gene            complement(1177..>1534)
                     /locus_tag="VFD73_15790"
     CDS             complement(1177..>1534)
                     /locus_tag="VFD73_15790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75448.1"
                     /translation="IKRVVELQESDSGSTAPVGGRGYIVADIPVLTALGLGATIASSL
                     VYCLYITSDDVLKLYPRPDILWGNLPILLYWQARTWLLVNRHQMHEDPVVFALRDRGS
                     HISFLAFLLLVFLAAR"
BASE COUNT          288 a          443 c          506 g          297 t
ORIGIN      
        1 agccgaggga tacccgccag gagcccgacc ccaggagagc agcgccctcc gcgtgtgcgt
       61 gcggccgtct gaggtgagtt ctaccacggt ctctcctcct tccctgtcgg tcatcgttcc
      121 ggtgcgcaac ggtgagcaat atctggagca ctcccttgct gccctcagcg atagtgagct
      181 cccgcgcgct cagtgggagc tcatcgtggt ggatgattcg agccaggatc gatcggtcga
      241 gctagccacg ccatatgccg accgactggt ccgaattgcc aatggaccgc tcggccccgg
      301 cgtcgcacgc aaccgaggcg ctgctatagc tcggggagcg atcctcacgt tcgtcgacgc
      361 cgatgtctgt gtgcacaggg atgcgcttgg acggatcgtg gaaacgttta ctcacgaccc
      421 gagtgtcagc gccgttttcg gcgcctatga ttcgcggcca tccgccgcgt cactggtgag
      481 tcagtaccga aacctgctcc accggtatgt gcacgagcgt gatgctgggg aggcagtgac
      541 cttctgggcc ggctgcggcg gggtgagagc tgccgtgttt tcagggtgtg gtggtttcga
      601 tgaaacggaa cacagcaagt ccagcatcga ggacatccag cttggctacc ggatgtcctc
      661 gtcgggctac cggatccgac ttcaacctga gattcaggga acccatctca agcgctggac
      721 gctgggcaac atgatccgga ccgatctctt cgggcggggc cttccctggg tgcggctgtt
      781 gctcagagga aacatccggc cggcagccac gctcaatctc cgaccctcgg agcagatgtg
      841 cacggtgctg gttgcgctgg ggctcttcgc gctcgtcatc tgggtcgtga gcggagatag
      901 gacggcattg ggggtggctg gcgccgctgt gctcgcgatg cttgccgcaa acgcgccgct
      961 gctcgcgtgg tttggccggc agcgcgggtg gtggtttgtc gtccaggtta taccgctaag
     1021 agttctgtac tacgcgctga acgcaatcgc ggtgattgga ggcctagtgg cgtttgcccg
     1081 tgagcagcag cgccgaccat ctcaagacga caagagtagt gcgcctacgc gcggcgctcc
     1141 cagcaagaga gcggctggtg cagggtaacg gcggcgttag cgggcagcga gaaaaaccag
     1201 taatagaaat gccagaaacg agatgtgact gccccgatct cgcaatgcga agaccaccgg
     1261 gtcttcatgc atctggtgac gatttaccaa taaccaggtg cgggcctgcc agtaaagaag
     1321 aatcggcaga ttgccccaga ggatatcggg gcgaggatag agtttgagga cgtcgtcact
     1381 tgtgatgtag agacagtaga ccaggctgct ggcgatagtg gccccgagcc cgagggcggt
     1441 gagtacgggg atatcggcga cgatgtaccc tcgtccacca actggagcgg tggaacccga
     1501 gtcactctcc tgcagctcga ccacgcgctt gata
//
LOCUS       DASRPQ010001379         1540 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_784974, whole genome shotgun sequence.
ACCESSION   DASRPQ010001379 DASRPQ010000000
VERSION     DASRPQ010001379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_784974"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VFD73_15795"
     CDS             complement(<1..214)
                     /locus_tag="VFD73_15795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75449.1"
                     /translation="MRYNDDGALLPTASETPDASPVPLMIASILRGDGITGVHTHVRQ
                     LRRYLQECGEPAPLITPFSWSRMQIYP"
     gene            complement(300..1181)
                     /locus_tag="VFD73_15800"
     CDS             complement(300..1181)
                     /locus_tag="VFD73_15800"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZI75450.1"
                     /translation="MDALMDEQTVQQFWQDHACGDAQVGGLRERFRDDYERFFTEYDR
                     FRYQNERHLAACIDALDVGGKQVLEIGLGEGADAERLIRNGARWSGVDLTAESVERVR
                     TRLTLRDLPHDGLRQGSALDLPFADDTFDMVFSHGVLHHVPDIKQAQSEIHRVLRPGG
                     ELVVMLYARWSLNYLVSIGLIRRAALLAAFPLARAGILKAAPDRGMLPAHLHNAMKMG
                     LSRYLRLDEFVHYNTDGPANPYALVYDRKRVEQDFPSFRVTRIYKRFMHAPPLPVHRL
                     PGETIMGWHLWVHLNPR"
     gene            complement(1212..>1540)
                     /locus_tag="VFD73_15805"
     CDS             complement(1212..>1540)
                     /locus_tag="VFD73_15805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75451.1"
                     /translation="DCRWKTQNVLISRNIFTFHPARIGSDCRPDKYCGFNGIFSQWGS
                     WFPYHGSIVENNIIFNQNNHFASNTYRGPWRFIVQQQGQAVGWTSWQASPYRQDAGST
                     MNSNGA"
BASE COUNT          309 a          467 c          461 g          303 t
ORIGIN      
        1 cggggtagat ctgcatccga ctccacgaga acggcgtaat cagcggggct ggttcgccgc
       61 attcctgaag ataccggcgc aactgccgga cgtgagtatg aacgccagtg atgccgtccc
      121 cgcggaggat cgacgcgatc atcagcggca caggggacgc gtccggagtt tcactggcgg
      181 ttgggaggag tgctccatca tcgttgtatc tcatcgtcat atagatcctc tgcgcggctg
      241 gcttgatact ccgccaccgg ttcgatcacc accgcgacgg cggacatgac acaggaccat
      301 caacgcgggt tcaggtggac ccagagatgc cagcccataa tggtctctcc gggtagccgg
      361 tggaccggga gcggcggcgc gtgcatgaag cgcttataga tccgcgtgac acggaaggac
      421 gggaagtcct gctccacccg cttgcggtcg tataccaagg cgtatgggtt agctggcccg
      481 tccgtgttgt agtgaacgaa ctcgtcgagg cgcagatagc gggacagccc catcttcatg
      541 gcattgtgaa gatgggcagg cagcattccc cggtccgggg ctgccttcaa gatcccggcc
      601 ctggcgaggg gaaaggccgc cagcaaggcg gcgcggcgga tcaagccgat ggacaccagg
      661 tagttcagcg accagcgggc gtacagcatg acgaccagtt ccccgcctgg gcgcagcacc
      721 cggtggatct cactctgcgc ctgcttgatg tccggcacat gatgcagcac gccatggctg
      781 aacaccatgt cgaaggtgtc gtcggcgaac ggcaggtcca gagcgctgcc ctgtcgcagt
      841 ccgtcatggg gaagatccct cagcgtcagc cgggtgcgta ccctctcgac ggattcggcg
      901 gtcaagtcaa ccccggacca gcgagcaccg ttgcgtatca agcgctcagc atcagctccc
      961 tcgcccaagc cgatctcgag cacctgcttg ccgcccacgt cgagggcatc gatgcacgcc
     1021 gctaggtgtc gttcgttctg gtaacggaag cgatcatatt ccgtgaagaa cctctcgtag
     1081 tcgtcacgga agcgctcgcg tagcccgcca acctgggcat cgccgcatgc gtggtcctgc
     1141 cagaactgct gaacggtttg ctcatccatt agtgcatcca ttactcaagg taatttcccc
     1201 ctccataatc attacgcgcc gttggagttc atcgtgctgc ccgcatcttg ccggtatggg
     1261 cttgcctgcc acgatgtcca acctaccgcc tggccctgct gctgtactat aaaacgccag
     1321 ggcccgcgat aagtattcga cgcgaaatgg ttattctgat taaatataat attattctcg
     1381 acaatcgagc catggtacgg aaaccaggaa ccccactggc tgaaaatacc gttgaatccg
     1441 cagtatttgt ccggccggca gtccgagccg atgcgagccg ggtggaaggt gaagatattc
     1501 ctgctgatga gcacgttctg ggtcttccac cggcagtcgt
//
LOCUS       DASRPQ010001380         1088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_785015, whole genome shotgun sequence.
ACCESSION   DASRPQ010001380 DASRPQ010000000
VERSION     DASRPQ010001380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_785015"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..616
                     /locus_tag="VFD73_15810"
     CDS             <1..616
                     /locus_tag="VFD73_15810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI75452.1"
                     /translation="RLSLAVGVISQSVSVTIGIVFGLLAGYYGRWVDALVMRLADITL
                     AFPTLLLLIAVAAAVKPSLPVVFVVIGVVGWAGMARLVRSQVLVLRRSEFVLAAQALG
                     ARDRRVLLRHLLPNVRTQVIIAATLGIGGAIMAEAALSFVGLGAQPPTPSWGAMVADG
                     RDLLRVAPWISFAPGLAIGIAVLGFNLVGDGLREAYDPRLRSER"
     gene            618..>1088
                     /locus_tag="VFD73_15815"
     CDS             618..>1088
                     /locus_tag="VFD73_15815"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HZI75453.1"
                     /translation="MGASVSPVGLSSPGYDIHELRRAEFPWTTGTIYLNHASVGPLPE
                     RTRVVLEAFNRKRAAPYMLPDRELIATLTESRRLAAQLISAADEEIALSINTGFGVSL
                     AARALPLQAGDIVVASDREFPANVYPWMLLKDVGVTLELAPTTPEGWPNEEYLLQ"
BASE COUNT          158 a          334 c          376 g          220 t
ORIGIN      
        1 ccgcctctcg ctggctgtcg gggtgatctc gcagtcggta tcggtcacca ttgggatcgt
       61 cttcggactg ctggcggggt actatggtcg ttgggtcgat gccctggtga tgcggctggc
      121 cgacatcact ctcgcattcc caacactgct gctgctcatc gcggtcgcgg ccgctgtcaa
      181 gccctcgttg ccggtcgtgt tcgtcgtcat cggagtggtc ggctgggccg gtatggcacg
      241 cctggttcgg agccaggtgc tggtgctgcg ccgatccgag tttgtgctgg cggcccaggc
      301 gctcggggcg cgagaccggc gggtgttact ccgacatttg cttcccaacg tccgcaccca
      361 ggtcatcatt gcggccaccc tcggcatcgg tggcgcgatc atggccgagg cggcgctatc
      421 gttcgtgggg ctcggggcgc agcctcccac cccgagctgg ggagcaatgg tcgccgatgg
      481 aagggatctc ctccgggtag caccctggat ttcctttgcg ccggggctgg caatcggaat
      541 tgcagtgctg ggtttcaatc tggtgggcga cggattgcgg gaggcgtatg acccgaggct
      601 cagaagtgag aggtgacgtg ggggcctcgg tctcgccggt agggctgtcc tcaccggggt
      661 acgacattca cgagctccgg cgggcggaat ttccctggac aaccggcacg atctacctca
      721 atcatgccag cgtcgggccg ctgccggagc gaacgcgggt ggtgctcgag gcgttcaatc
      781 ggaaacgggc ggctccctac atgcttcccg atcgtgagct gatcgcgaca ctgacggagt
      841 cgcgccggtt ggccgcccag ctgatcagcg ccgccgacga ggaaatcgct ctcagcatca
      901 ataccggctt cggagtcagt cttgcggcgc gtgccctgcc gcttcaggcc ggcgacattg
      961 ttgtggccag cgatcgcgaa tttcccgcca acgtgtaccc ctggatgctg ctcaaggatg
     1021 taggggtcac cctggagctg gcgcccacca cgcctgaggg gtggccaaac gaggagtatc
     1081 ttctgcag
//
LOCUS       DASRPQ010001381         1002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3624797, whole genome shotgun sequence.
ACCESSION   DASRPQ010001381 DASRPQ010000000
VERSION     DASRPQ010001381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3624797"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..913
                     /locus_tag="VFD73_15820"
     CDS             <1..913
                     /locus_tag="VFD73_15820"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HZI75454.1"
                     /translation="QPLLLRSAGAPAFGVSAGRRHFLQQLGVLGAGAPFVVSLSGVKL
                     SYDFRVEEYELTLPHWPPALDGLRVAHLSDIHVGGAMHRERLFQIARLTNNTKPDLVV
                     HTGDFLTHRSGEFDAPLYEALAQVRAPYGQWACLGNHDFDAPERLVHRLAQAGVTVLR
                     DTVVTVSVQGQPLEIAGLEYVFGDRDPRAWYTQLMRGWPARTATPRILLNHDPRTFFL
                     LPEKCAQLVLSGHTHGGQVGIQWGKGSALTVVGLVGVPDQGIFRRSEMILYITRCVGF
                     YGYPMRLGIPPEIALLTLRAPRALAPA"
BASE COUNT          158 a          322 c          313 g          209 t
ORIGIN      
        1 tcagcccctt ttgcttcgtt ctgccggcgc tccagccttt ggcgtctctg caggacgtcg
       61 acacttcctc cagcaattag gtgtcctggg cgcgggcgcg cccttcgtcg tctccctgtc
      121 gggagtcaag ctctcgtatg actttcgcgt agaagaatac gagctcacgc tcccccactg
      181 gccccctgcc cttgacgggc tccgcgttgc ccacctctcg gatatccatg tcgggggcgc
      241 gatgcatcgg gagcgactct tccagatcgc gagactcacg aataatacta agcctgatct
      301 ggtcgtgcat accggcgatt tcctgaccca tcgcagtggc gagtttgacg cgccgctcta
      361 tgaggcgctg gcgcaggtcc gcgcgccgta cggacaatgg gcatgtctgg ggaatcatga
      421 cttcgacgcg cccgagcggt tggtgcaccg cctcgctcag gccggcgtca cggtgctccg
      481 agatacggtg gtgaccgtgt ccgtccaggg ccagccgctg gaaattgccg gactggagta
      541 tgtgtttggc gaccgagacc caagggcgtg gtacacccag ctcatgcgtg gctggccagc
      601 ccgcaccgcc accccgcgta ttctcctgaa tcatgaccct cgtaccttct tccttctccc
      661 cgagaagtgc gcgcagctcg tgctgtccgg gcacacgcat ggcgggcagg tcgggataca
      721 atggggaaaa ggatcggcgc tgacggtggt ggggctggtg ggagttcccg accaaggcat
      781 ctttcgccgc agcgagatga tactctatat cacgcgctgt gtggggtttt atggctaccc
      841 gatgcggctg ggcattccgc ccgaaatcgc cctgctgacg ctgcgcgcgc cgcgagcgct
      901 tgctccggca taaccgaccc ctcttcgcct ccgaggagtt ttgtgtcggc tcgtccagag
      961 gaggagggga agaggtccag accgccatgg cgcctgtgtt ca
//
LOCUS       DASRPQ010001382         2507 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2696003, whole genome shotgun sequence.
ACCESSION   DASRPQ010001382 DASRPQ010000000
VERSION     DASRPQ010001382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2507
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2696003"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2053)
                     /locus_tag="VFD73_15825"
     CDS             complement(<1..2053)
                     /locus_tag="VFD73_15825"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HZI75455.1"
                     /translation="MSTLPVLRARSGHRRCLAGCRYILLALQLALWGRVEPARAQTVA
                     DVQVTPETMTLGVGQKQTLFATAFDQRGNLIPTAKFTFWSSDTLIAVVRKDGTVMGVK
                     PGLAKIEARVQGKRASMAVLITGTSPSTADPAARDASASVLTLDPAAANLFPGESIRV
                     VAQGFRDNGSPGILGRVMIRSLKPEVARVDTGGLIIAVAPGQAIVQAASGKLMATLPV
                     EVEATDFAVVPSRVSLAPGEVDTLHASVPSQGNRILGGLVQWRSTDSSVASVSSGGVV
                     RARAAGQAEVIATAFTQEHRATVSVHRVPDAMVVSPPHGNVIVLPVRSTRQFTAVAEA
                     ADSTPIKEARVSWQVGDSAVASFDAGSGILTARNVGTTTLTARLTGIKPAVWTVQVTA
                     GEVSIEPGRAGLLVGKKITFSAQGHETSGSGSKAVSTQWSSDHPEVAVVRQTGTVEAL
                     SPGRATITATTPWGKKASAEVFVLGDLTLSSNRSGTQGIYQMQAAVPATLVPLLVDNA
                     SNVQAVLSPDRTRIAFSSDRSGSFDLYLMDADGQNLRRITSAPGNEGEPAWNPEGTRL
                     IYTAANGTTTQIASISTDGTDNRQLTTASGGNHSPSVSADGKTIAFVSARDGNHAIYT
                     MALNGSNQRRLTKGSAREISPKFGPKGELYYVVDRVGSSYKGSKVLRATPGGGTSQVL
                     QT"
BASE COUNT          434 a          772 c          816 g          485 t
ORIGIN      
        1 cagtttgcag gacttgggag gtgccgcccc cgggtgtggc tcggagcacc ttggatcctt
       61 tataggagct ccctacccga tcgaccacgt agtagagctc gcccttgggg ccgaatttgg
      121 gactgatctc gcgggctgag cccttggtaa gccggcgctg attgctccca ttgagggcca
      181 tcgtgtagat ggcatgattg ccgtctcggg cagacacgaa agcgatcgtc ttgccgtcgg
      241 ccgacactga gggcgagtgg ttgccgccgg aagccgtcgt cagctgccgg ttgtcggtgc
      301 catcggtgga gatacttgca atctgcgttg ttgtgccgtt ggcggcggtg taaatgagtc
      361 tggttccctc tggattccac gccggctcgc cttcatttcc tggtgcggaa gtgatccgtc
      421 gtaggttctg cccgtcagca tccatcagat agagatcgaa gctgccgctt cgatccgagc
      481 tgaaggcaat gcgagtgcga tcgggcgaca ggaccgcctg cacgttgctg gcgttatcaa
      541 ccaatagcgg aaccaaagtc gcgggaactg ctgcctgcat ctggtatatg ccctgagttc
      601 cgctgcggtt ggaactgagc gtcaggtctc ccagcacaaa cacttcggcg ctggccttct
      661 tgccccacgg cgtcgttgcc gtgatcgtcg cccgtcctgg actcaaggcc tcgaccgtgc
      721 cggtctgccg gacgaccgcg acctcgggat ggtccgagct ccattgggtg gagacggctt
      781 tggagccgga cccgctggtt tcatgaccct gcgccgagaa cgtgattttt ttgcccacca
      841 gcagtccggc tcggcccggc tcgatggaca cctcgccggc ggtaacctgc accgtccata
      901 ccgccggttt gattccggta agtcgcgccg tgagggttgt ggtgcccacg ttccgggctg
      961 tgagaatccc gctgccagca tcaaagctcg ccaccgcgga gtctccgacc tgccagctga
     1021 ccctcgcctc cttgatgggg gtggagtcgg cagcttccgc gactgcggta aactggcgag
     1081 tcgaccggac cggcagcacg atgacgttcc cgtgcggcgg cgagacgacc attgcgtccg
     1141 gaacgcgatg gaccgagaca gtggctctgt gttcctgggt gaacgcggtc gcgataacct
     1201 cggcctgtcc tgccgccctc gcccgcacca ccccgcccga gctgacgctg gccacgctgc
     1261 tgtcggtgga gcgccactga acgagaccac cgagaatccg gttgccctgg ctcgggacag
     1321 aggcgtgcag ggtatccact tcgccaggcg ccagagatac ccggctgggc accaccgcaa
     1381 agtcggtcgc ctccacctcg acgggcaagg tcgccatcaa cttaccggaa gccgcctgca
     1441 cgatcgcttg gcccggtgcg actgcgataa tgagcccgcc ggtatctacc cgggccacct
     1501 ccggcttcaa cgagcggatc atcactcgac caaggatccc gggggagccg ttatcccgga
     1561 atccctgggc aacgacccgg atgctttcgc ctggaaacag gttggcggct gccggatcga
     1621 gcgtcagcac ggatgcggaa gcgtcgcgtg cagcgggatc ggcggttgac ggcgaggttc
     1681 cggtgatgag gaccgccatc gaggcacgtt tcccctgtac tctggcctcg atcttggcca
     1741 ggccaggctt cacgcccatc acggtgccgt ccttcctgac taccgcaatc agggtgtcgg
     1801 agctccaaaa agtgaatttt gcggtaggaa tcaggttgcc ccgctgatcg aacgcggtag
     1861 caaacagggt ttgtttctgc ccgaccccga gcgtcatggt ctccggcgtc acttggacgt
     1921 cggccacggt ttgcgcgcgt gcgggctcga ctctgcccca caacgcaagt tgcagagcga
     1981 gtaggatata gcggcacccg gccaggcagc ggcgatggcc tgagcgggcc cgcagaacgg
     2041 ggagagtgct caccgaattt tgaagtccgg aggaaaatgg ggtctgctaa ttatagctcc
     2101 gcagcggacg gcggaacatc agtcgcctct cacagaatga cacttcaccg cttgcacaag
     2161 acctgaggat gtgcaagtta tatgttgtaa ctcccggcag gcgctgcagc ggcgccccga
     2221 gaccggcggc gggtggcgcc gcactcgttc ggaggaagct aagatggccg aacttcatta
     2281 tatggagatg ggctggtcgg gctctgggtg gatggatccc ctgccttcgg agagtactcc
     2341 gactccatcg agcccctcat cctttgactt cggtgagcct gctcctggtg gacggggaga
     2401 gtcgggtatg ggtggcagaa gtggttcgac gggccgcgca cggtccggtg ggggcggatc
     2461 ccgctctggc agcaggtcgc gaaagaagag ctcgaagcga tctgcca
//
LOCUS       DASRPQ010001383         4151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2060455, whole genome shotgun sequence.
ACCESSION   DASRPQ010001383 DASRPQ010000000
VERSION     DASRPQ010001383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4151
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2060455"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..3680
                     /locus_tag="VFD73_15830"
     CDS             <1..3680
                     /locus_tag="VFD73_15830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75456.1"
                     /translation="KNIQGIERQSLIISDKIKAFNAVDNMHFNGVTTPLGLSIRGSEA
                     ARGSTALRPVKGQGIVKATTNLVYNSTMGFPIKVVRSYNDIKPSAYIDVHAEDSYKNL
                     DATLREAPMISRQTRERMVSSFIRASSADRGLQLVKIETEVVADMVNRYNRGKAPADQ
                     LTHEMAQDLYRDFATRRRQAQAQRMQGGRAYGSARIPDPANPGMTINVAEVDDVGGRL
                     VTTPIFETQLANSHVMMDFKAFQRMLNEQGSNFQKTWNVAKDKGAWLVDMADTLGTYW
                     KFAQLFRLGYGPRALADDYLGQLARFGGLAALERAVTGGRVKLEDVLRNRMAPGSVEM
                     ARTRAGILQGELDHLASEQSKIKGLLAREKHAGGPNVKVYEDDLRLISDELAFRNTEM
                     GELTKLTAEGSQMRNLKIGRQSFEGGFRGAEGQLFKDLASGQTNLERLLGSESSLVLK
                     RARSMDWTNIDVTTHGAARHMEAWLRKINQQIAQSAVGRAALSGMDEPQLVNWMRTNP
                     EGIRYRHDIGLKNVTDLELARRIKAEVDYTIDPSNPLLAGVRQAALDGTLTADMLKVV
                     PSRARPMVNAQSYSYAIGDNPLASALDGMITKYFNLVNQMPAQKLLRNPLFGQQYKAD
                     LAAQMANLKARGVTHVDEATRKIMENQARKAAVRDVKRFTFTMDHETKMAYATRHFAA
                     FFGAQQESWNRWARIISEKPQALAHVAQVYGAPSRAGITVDQDGNQIDGAGFRTNPVT
                     GQKELVPYSERKMLIQIPEYLGGKEIKKGLGLDPDAAFTVPLSSAELVLNSGDGVLPV
                     GAGPYLQIATNHFAQDNPDVADWAKKLGVLPFGPQDSVMDFINPTTGKRLGDSADDMG
                     EAKQRSLFYMMQVENYKWENGQRDTQPTWDELKDRADRWSIARTAFAFALPLSVNAQD
                     PYQFFRDEFQRFQKLDPQSADQKFYDKYGDSFYLFTQSMSKNSTGLRPTAEGVKMSKY
                     YQDLINQVGPEYAGLIVGDEGDGQFSEGAYFYQKTHATDVAGGSPDRTTLSAREAWAE
                     GQVALGWKQFNKTNEKLYADLFDQGFTSFNDEGAEMLKAKRDANIQLITTEFFPDNGE
                     PNPYYNEAWTKAYNSIDKSKYDRQASDLWKIVNDAELWAKAQPLADGTVGIRSDLYTL
                     RGYLEQRREFQKALLIRDANGGSADPTAVGNEDLKDSWDRMVLDMIQKDTKFAWIHSR
                     WFSGDMGFNQRVAQNEEETSG"
     gene            3673..>4151
                     /locus_tag="VFD73_15835"
     CDS             3673..>4151
                     /locus_tag="VFD73_15835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75457.1"
                     /translation="MAEPTPGPSPNAAPQGPLEARDAAIDRLAKNNLQGSGQSANPKD
                     PLVYLGQTQTVAGMSDRNQLLVESGKLKPLTVDNTMSLSQAAGQYYTWDQKTKDNFLT
                     QVALTGKDVTGLSDGEVAQLWAAYAAQAGNYYAMGQKVTPWDILAKDRQQREAFMKTP
                     "
BASE COUNT          904 a         1302 c         1270 g          675 t
ORIGIN      
        1 ccaagaacat ccagggcatt gagcgtcaga gtctgatcat ctccgacaag atcaaggcat
       61 tcaacgcagt cgacaacatg cacttcaacg gcgtcaccac tcctctgggt ctttcgatcc
      121 gtggcagtga ggccgctcgc ggatccactg cactgcgccc ggtcaagggg cagggcatcg
      181 tcaaggcaac caccaacctg gtctacaact ccacgatggg attccccatc aaggtggttc
      241 gctcgtacaa tgacatcaag ccgtcggcgt acatcgatgt ccatgcagag gactcgtaca
      301 agaacctcga cgcaaccctg cgcgaggctc cgatgatcag caggcagacg cgtgagcgca
      361 tggtctcgtc gttcatcagg gcatcctcgg ctgatcgcgg cctccagctc gtgaagatcg
      421 agactgaggt tgtggccgac atggtcaaca ggtacaaccg aggcaaggct ccggctgacc
      481 agctcactca cgagatggct caggacctgt accgagactt cgcgaccagg cgacgtcagg
      541 cccaggctca gcgtatgcag ggcggccgag cttacggctc ggcgcgcatc cccgacccag
      601 ccaaccctgg catgaccatc aacgtcgccg aagtggacga tgtcggtggg cgcctggtga
      661 ccacccccat cttcgagacg cagctcgcca acagccacgt catgatggac ttcaaggcgt
      721 tccagcgtat gctcaacgag cagggctcga acttccagaa gacctggaac gtggccaagg
      781 acaagggtgc atggctggtc gacatggccg acaccctggg tacctactgg aagttcgctc
      841 agctcttccg ccttggctac gggcctcgcg ccctggccga cgactacctg ggtcagctcg
      901 cccgcttcgg cgggcttgca gcccttgagc gcgcggtgac cggtgggcgc gtgaagctgg
      961 aggacgtgct ccgcaaccgc atggctccag gatccgtgga gatggctcgc actcgcgcag
     1021 gcatcctcca gggtgagctg gaccaccttg cgtccgagca gagcaagatc aagggactcc
     1081 ttgcgcgcga gaagcacgca ggcggaccga acgtgaaggt ctacgaggat gacctcaggc
     1141 tcatctccga tgagcttgcc ttccgcaaca ccgagatggg tgagctgacc aagctcaccg
     1201 ccgagggttc gcagatgcgc aacctcaaga tcggacgcca gtccttcgag ggtgggttcc
     1261 gtggcgccga gggacagctc ttcaaggacc tggcttctgg tcagaccaac cttgagcgtc
     1321 tgctcgggtc ggagtcgagt ctcgtcctca agcgtgcgcg ctcgatggac tggacgaaca
     1381 tcgacgtcac cacgcacgga gcggccaggc acatggaggc ttggctgcgc aagatcaacc
     1441 agcagatcgc gcagtcggct gtcggtcgtg cagcactcag cggcatggac gagccacagc
     1501 tcgtgaactg gatgcgcacc aacccggagg gtatccgcta ccgccacgac atcggtctca
     1561 agaacgtcac ggacctagag cttgctcgca ggatcaaggc cgaggtggac tacacgatcg
     1621 acccgagcaa cccgcttctg gcgggtgttc gtcaggcggc gctggatgga accctgacgg
     1681 ccgacatgct caaggtcgtg ccctcaaggg cacgccccat ggtcaacgct cagtcctaca
     1741 gctacgcgat cggcgacaac ccgctcgcat ctgcgctgga tggaatgatc accaagtact
     1801 tcaacctggt gaaccagatg ccagcacaga agctgcttcg caacccgctg ttcggtcagc
     1861 agtacaaggc tgaccttgcg gcacagatgg ccaacctcaa ggctcgcggt gtaacccacg
     1921 tggacgaggc gacacgcaag atcatggaga accaggctcg caaggctgcg gttcgagatg
     1981 tcaagcgctt cacgttcacc atggatcacg agaccaagat ggcctacgcg acccgccact
     2041 tcgcggcgtt cttcggagcg cagcaggagt cgtggaaccg ctgggctcgc atcatctccg
     2101 agaagccaca ggctctggcc cacgtggcgc aggtctacgg cgcgccctcg cgcgccggta
     2161 tcacggtgga ccaggatggc aaccagatcg acggtgctgg attccgcacg aacccagtga
     2221 ccggacagaa ggagcttgtg ccctactcgg agcgcaagat gctgatccag atccccgagt
     2281 acctgggcgg caaggagatc aagaagggtc tcggcctgga ccctgacgcg gccttcaccg
     2341 tgccgctgtc ctcggctgag ctggttctga actccggcga cggggtgctc ccagtgggag
     2401 ctggaccgta cctccagatc gcgaccaacc acttcgctca ggacaaccct gacgttgcgg
     2461 actgggccaa gaagctggga gtgctgccct tcgggccgca ggactccgtc atggacttca
     2521 tcaacccgac caccggcaag cgcctcggcg actcggcgga cgacatgggt gaggccaagc
     2581 agcgaagcct gttctacatg atgcaggtcg agaactacaa gtgggagaac gggcagcgtg
     2641 acacgcagcc cacgtgggac gaactcaagg acagggctga caggtggagc attgctcgca
     2701 ccgcgttcgc cttcgccctc ccgctgagcg tcaacgctca ggacccgtac cagttcttcc
     2761 gtgacgagtt ccagaggttc cagaagctgg accctcagtc ggcagaccag aagttctacg
     2821 acaagtacgg agactcgttc tacctgttca ctcagtcgat gtccaagaac tcgactggcc
     2881 tccgccctac ggcggagggc gtgaagatgt cgaagtacta ccaggacctg atcaaccagg
     2941 ttggtcctga gtacgctggc ctcatcgtcg gagacgaggg tgatggtcag ttcagcgagg
     3001 gtgcgtactt ctaccagaag acgcacgcca ccgatgtggc gggcggatct ccggaccgca
     3061 ccaccctgtc ggctcgcgag gcatgggcag agggtcaggt cgcgctgggc tggaagcagt
     3121 tcaacaagac caacgagaag ctgtacgcag acctgttcga ccagggcttc acctcgttca
     3181 atgacgaggg tgctgaaatg ctcaaggcga agagggatgc caacatccag ctgatcacca
     3241 ccgagttctt cccggacaac ggtgagccca acccgtacta caatgaggca tggacgaagg
     3301 cgtacaactc gatcgacaag tcgaagtacg accgtcaggc atctgacctc tggaagatcg
     3361 tcaatgacgc tgagctgtgg gccaaggccc agccgctagc ggatggtacg gtcggaatcc
     3421 gttccgacct gtacactctt cgcggatacc tggagcagcg cagggagttc cagaaggcac
     3481 tgctcatccg tgacgcgaac ggcggatcgg cagatccgac cgccgtgggc aacgaggatc
     3541 taaaggatag ctgggaccga atggtcctgg atatgatcca gaaggacacc aagttcgcct
     3601 ggatccacag tcgctggttc tccggcgaca tgggattcaa ccagcgagta gcacagaacg
     3661 aggaggagac cagtggctga gccaaccccg gggccgagcc ccaacgcagc gccacagggt
     3721 ccgctagagg cgcgtgatgc ggccatcgac cgcctggcca agaacaacct acagggctca
     3781 ggccagtccg ccaacccaaa ggacccgctg gtctacctcg gtcagactca gaccgtcgcc
     3841 gggatgagcg accgcaacca gctcctcgtg gagagcggca agctcaagcc cctgaccgtc
     3901 gacaacacca tgtcgctgtc ccaggctgcg ggccagtact acacgtggga ccagaagacg
     3961 aaggacaact tcctcactca ggtcgcactc accggcaagg atgtcactgg actcagtgat
     4021 ggcgaggtcg cccagctatg ggcggcctac gccgcacagg cgggcaacta ctacgccatg
     4081 ggtcagaagg tcactccgtg ggacatcctc gccaaggaca ggcagcagcg tgaggcgttc
     4141 atgaagacac c
//
LOCUS       DASRPQ010001384         1012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_470366, whole genome shotgun sequence.
ACCESSION   DASRPQ010001384 DASRPQ010000000
VERSION     DASRPQ010001384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_470366"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..278)
                     /locus_tag="VFD73_15840"
     CDS             complement(<1..278)
                     /locus_tag="VFD73_15840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75458.1"
                     /translation="MASLTDSLRQVMAVDGVRSAALVDIATGMVVRSTGEEGTDFIAA
                     AAGMADEVRIARAALGPGRPGGDLEEMSLITARRVHLSKILGTRLGEG"
     gene            549..920
                     /locus_tag="VFD73_15845"
     CDS             549..920
                     /locus_tag="VFD73_15845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017405441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75459.1"
                     /translation="MNIETALKEAMNIEGALGVALVDWESGMPLGTLGGGKYLDLDLA
                     GAGNTEVVRAKMRTMQSLQLNDMIEDILITLGKQYHLIRLMTNADGAQNMFLYLALDR
                     SKANLALARHQLKRIESDLVI"
BASE COUNT          207 a          340 c          303 g          162 t
ORIGIN      
        1 atgccctccc ctagccgggt accgaggatc ttggacaggt ggacccggcg cgccgtgatc
       61 agggacatct cctccaggtc acctccgggc cggccggggc cgagcgcggc gcgggcgatc
      121 cggacctcgt cggccatccc cgccgcagca gctatgaaat ccgtaccctc ttctccggtc
      181 gaccgcacca ccatcccggt ggcgatgtcg accagtgcgg ccgaacggac gccgtcaacc
      241 gccatgacct ggcgaagtga atctgtaagg ctggccacgc atccccctct gccacccatc
      301 cgcctggcct aggcgacccc ggccgcaggc aggaatatac cgcaatcaat aacctcaaat
      361 ctgactaacg cccagttccg agcctcaaag cgcccagcca gtgcgggaac cccatgtaac
      421 ccagccatca cattcggtaa aaagtccgaa tatatccgtt catacggcag ggagagtcag
      481 caccagttag ggttggcgtc acttgtcaac aggcgtggtc gtccgcgtgt ctggagggga
      541 ttgggcccat gaacatcgaa acggctctca aggaagcaat gaacattgag ggtgctctag
      601 gagtcgctct cgtcgactgg gagagcggca tgccgctcgg caccctgggc ggcggaaagt
      661 acctggacct cgacctcgcg ggcgcgggca acaccgaggt ggtgcgggcc aagatgcgca
      721 caatgcagtc gctccagctg aacgacatga tcgaggacat cctgatcacc ctgggcaagc
      781 agtaccacct gatcaggctc atgaccaacg ccgacggcgc gcaaaacatg ttcctctatc
      841 tcgcgctcga ccgcagcaag gccaacctgg ccctggcgcg tcaccagctc aagaggatcg
      901 agagcgacct cgttatctga cgtcggttgc ccggcgcccc gctatgaggg tgccattcgc
      961 acggggcaga gccttacggc cgatccggca cgctgcgggc ggagaccttt gg
//
LOCUS       DASRPQ010001385         1193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_163128, whole genome shotgun sequence.
ACCESSION   DASRPQ010001385 DASRPQ010000000
VERSION     DASRPQ010001385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163128"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..987)
                     /locus_tag="VFD73_15850"
     CDS             complement(<1..987)
                     /locus_tag="VFD73_15850"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HZI75460.1"
                     /translation="MTLSLKASIAVVLLGTLTACGGGGGGGGGSSRGSGVGPPMGDGW
                     IAGVYQPASHYAAQCQNPRSGTNPATGKPYPDVQGTTLDENNFLRSWTNELYLWYSEV
                     PDVDPGTYSTTSAYFDILKTTATSSTGRPKDRFHFTYPTATWQQMSAAGIDIGYGLTW
                     DIVANTPPRQVYAVYIWTGASAAAAAAAGIARGWEVLSIDGADMINAGDQMSVNTLNA
                     GLAPASSGEAHAFVFKDGSGVTHHVTLHASAVTETPVAVVEPLPTAAGPVGYLLFNSH
                     IATSEQELIAAITQLKSANVTDLMLDLRYNGGGYLDIASELAYMIAGPAPTAG"
BASE COUNT          225 a          359 c          372 g          237 t
ORIGIN      
        1 gccagccgtg ggcgcgggcc cggcgatcat ataggccagc tcgctggcga tgtccaggta
       61 gccgccaccg ttgtagcgca agtccagcat gagatccgtg acgttcgcgc tcttgagctg
      121 agtgatggcg gcgatcagct cctgctcgga agttgcgatg tgagagttga acagcagata
      181 cccaacgggt ccggcagcgg tggggagcgg ttcgaccacc gcaaccggcg tctcggttac
      241 ggcgctcgcg tgcaacgtca cgtgatgagt cacgccactg ccatctttga agacgaacgc
      301 gtgcgcctcg ccggaggatg ccggcgccag tccggcgttg agcgtgttga cgctcatctg
      361 gtcgccggca ttgatcatat ctgcgccgtc gatgctcaag acttcccacc cgcgagcgat
      421 gccagcggcg gcggcagcag cggcagaagc tcccgtccag atgtagacgg cgtagacctg
      481 acgtggcggt gtgttggcga cgatatccca ggtaagaccg taaccgatat ctattccggc
      541 agcggacatt tgctgccagg tggctgtcgg ataggtgaag tgaaagcgat cctttggtcg
      601 acccgtggag ctagtggcgg tcgttttcag aatgtcgaag taagccgagg tggtcgaata
      661 ggtacccggg tcgacatccg gcacttcgct gtaccaaagg tagagctcgt tggtccagga
      721 acgcaggaaa ttgttctcat cgagagtcgt tccctgcaca tccgggtagg gtttgccggt
      781 cgccgggtta gtaccgctac gtggattctg acattgtgca gcatagtgcg aggccggctg
      841 gtagacaccg gcgatccagc catcgcccat gggggggccg acaccgctgc ccctgctgct
      901 cccgccgcct cctcccccgc ccccgccaca ggccgtcagc gtgccaagca gcacaacggc
      961 gatggacgct ttgagtgata atgtcatttt cccccctaag ctccgccgtc gcgtcagcca
     1021 gcgccgcgtg acacccggga ttccccgtca cacggaggtg cgctgaaact tgccatacgg
     1081 catgtttttc tggttatgag tgccgcgcag ggacagggat agatgcccta ttcaccacgt
     1141 actactatat ctcaactgta aatctcaact ctaactcgcc agagagctgc cgg
//
LOCUS       DASRPQ010001386         1068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3321025, whole genome shotgun sequence.
ACCESSION   DASRPQ010001386 DASRPQ010000000
VERSION     DASRPQ010001386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3321025"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            234..1055
                     /locus_tag="VFD73_15855"
     CDS             234..1055
                     /locus_tag="VFD73_15855"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF016550.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HZI75461.1"
                     /translation="MAGRRQNPAGVDVSVPNVARMYDYWLGGKDNFAADREAAERSME
                     LVPQLPWLARENRGFLGRAVRFCADAGITQFLDIGSGLPTNQNVHQVAEQVIADPRVV
                     YVDNDPVVVSHAQALLATPHTTAVQGDLTRPDEILNDPEIGRLIDLSKPVCLLLVAIL
                     HYISDDFDTYGCVARLGEAMAPGSYLVITHSEVSPAHVAGDEPLSDTARELKEILEET
                     PLGPVRNREEIAAYFGDLTLVEPGLVNVWDWRPDSEVVVNPSDFLTVLAGVARKD"
BASE COUNT          195 a          339 c          354 g          180 t
ORIGIN      
        1 tcttcctggt cgcggatctc gcggggcggc ggccggtcat ccgtgggcgc atcgatatgg
       61 ccgtatcgca ccggcggaat caattgccac gggacacgcc gatgccgtgt ccggagagat
      121 gtcacagaac ccggcaagct aaccatcacc acgtcaggcc tgctggcgga aacacaggcc
      181 agcgagccaa tcgagtattc gaccggcgga tatgtccagt acgctcggca agcatggcgg
      241 ggagaaggca gaacccggca ggagttgacg tgtcggtgcc gaatgtggcg cgcatgtacg
      301 actactggct cggcggcaag gacaacttcg cggcagaccg ggaagcggcc gagcggtcga
      361 tggagcttgt cccgcaactg ccctggctcg cccgggagaa ccgcggattc ctcgggcgcg
      421 ccgtgcggtt ctgcgcggac gccgggatca cccagttcct cgacatcggc tcgggactgc
      481 ccaccaacca gaacgtccac caggtcgccg agcaggtcat cgcggatccc cgcgtggtgt
      541 acgtggacaa tgacccggtg gtggtcagcc atgcccaggc gctgctggcc accccgcata
      601 ccacggccgt acagggcgat ctgacccggc ccgatgagat cctgaacgat cctgagattg
      661 gccgtctgat cgacctgagc aagccggtct gcctcttgct ggtggccatc ttgcattaca
      721 tttccgacga tttcgacacc tatggctgcg tggccaggtt gggggaagcg atggcccccg
      781 gcagctacct ggtgatcact cattccgagg tgtcacccgc ccatgtcgcc ggtgacgagc
      841 ccttgtcgga taccgcgcgc gagctcaagg agatcctgga agagacaccc ttgggcccgg
      901 tccgcaaccg tgaggagatc gccgcgtact tcggtgacct gacgctggtg gaaccgggac
      961 tggtcaatgt ctgggactgg cgcccggaca gcgaggtggt ggtcaacccc agcgacttcc
     1021 tgaccgtcct cgccggagtg gccaggaaag actaaccggc gctgtgtg
//
LOCUS       DASRPQ010001387         1113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3625733, whole genome shotgun sequence.
ACCESSION   DASRPQ010001387 DASRPQ010000000
VERSION     DASRPQ010001387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3625733"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..784)
                     /locus_tag="VFD73_15860"
     CDS             complement(<1..784)
                     /locus_tag="VFD73_15860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75462.1"
                     /translation="MRTDQLVISGLSNTGILSRARRNPRTGNAATGNAGSITVTAGQV
                     ELYDGGGIRTDTQSTGKGGTINVVADSLLIVGRADTGRPITIDSGITSNASPGSMGNA
                     GDVTVTAHDLVVRGGGPRSVAGISSATAAGASGNAGTVSVSGHSIALANGAKISTENA
                     SSGTGGPVQLNASDTLTMDRAEILARTTTQEGGDVTVAVGRLFDLRDSRVTTSVAGGL
                     GKGGNIIMDMPLMVLDASRIEANAQEIAELKTELARPWWRRLI"
     gene            complement(790..>1113)
                     /locus_tag="VFD73_15865"
     CDS             complement(790..>1113)
                     /locus_tag="VFD73_15865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75463.1"
                     /translation="IASNALNRSTGNAGNVTVEAGDLTVRNGGGIGSITRGRGHAGAV
                     NVRADRIFASEDGSGNSTGIQSDAGTAITGPTGPGGAITVSAREVRLYDGGIIQSETW
                     GRMPA"
BASE COUNT          181 a          373 c          326 g          233 t
ORIGIN      
        1 tgattagcct tcgccaccac ggccgcgcca gctcggtctt gagctcagcg atttcctgag
       61 cattggcctc tattcggctg gcatcgagta ccatcaacgg catgtccatt atgatgttgc
      121 cgcccttgcc caaaccacca gcgacagacg ttgtcaccct gctgtctctc agatcgaaca
      181 gccggcccac ggccaccgtc acatccccac cctcctgagt cgtggtccgg gccaggatct
      241 cggcacggtc catggtcagg gtatccgatg cgttgagctg gaccggtccg ccggtgccgc
      301 tgctggcgtt ctcagtggat atctttgcgc cgttggccag ggcaatggaa tggcctgata
      361 cgcttaccgt cccggcattc ccgctcgcgc cggcggccgt ggcactcgag atgccagcaa
      421 cggaccgggg accgccaccg cgcaccacca gatcgtgggc tgtaaccgtc acgtccccag
      481 cgttacccat cgatcctgga ctagcattgc tcgtgatgcc gctgtcgatg gtgatcggcc
      541 tgccggtatc ggcccggcca acaatcaaca ggctgtccgc cacaacgttt atggttccac
      601 ccttgccggt ggattgggtg tcagtccgaa tgccaccgcc gtcatacagt tctacctggc
      661 ctgccgtgac cgttatgctt ccggcgttgc cagttgcggc gttgcctgtg cgagggttgc
      721 ggcgggcccg actaaggatg ccagtgttgc tgaggccgga gatgaccagc tggtcggtcc
      781 gcacattgat tatgccggca tcctccccca cgtctcgctc tgaataatgc caccgtcgta
      841 caaccgtact tcccgcgcgc taacggttat ggccccgccg gggccggttg ggccggtaat
      901 ggcggtgccg gcgtcgctct ggatacctgt agagtttcca gagccgtcct cggaggcgaa
      961 gatacgatca gcccggacat tcactgcacc ggcatggccg cgacctcgcg tgatggaacc
     1021 gatgcccccg ccattgcgca ccgtcagatc accggcttca accgttacgt tcccggcatt
     1081 gccggttgag cggttcaaag cgttgctggc gat
//
LOCUS       DASRPQ010001388         2819 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3321519, whole genome shotgun sequence.
ACCESSION   DASRPQ010001388 DASRPQ010000000
VERSION     DASRPQ010001388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2819
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3321519"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..918)
                     /locus_tag="VFD73_15870"
     CDS             complement(<1..918)
                     /locus_tag="VFD73_15870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HZI75464.1"
                     /translation="MKWLWRSLRRISLTRWILISMILGALIGWWRPELGISLKPLSTI
                     FLRMIKSIVVPIIFGSLVIGIAGHGDDMKRVGRLALKSIIYFELITTIALMVGLAVVN
                     LTRPGVGVQLTASATQGQELAHNTISFSSFLEHIVPQSFFEAAANNEVLQIVFFSIIF
                     AVALSQVREGPKLAMLGFCEGLAETMFKFTGIVMKYAPIGVGAAIAFTVGQSGLGVLL
                     SLGKLVLTLYLALIVFVLVALVPAALIAGVPIGQFIQMVKEPALIAFATTSSEAALPK
                     GMENMERLGVPRRIVAFVIPTGYSFNLDGT"
     gene            complement(926..>2819)
                     /gene="tkt"
                     /locus_tag="VFD73_15875"
     CDS             complement(926..>2819)
                     /gene="tkt"
                     /locus_tag="VFD73_15875"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HZI75465.1"
                     /translation="YLLWTRFLRHNPHNPDWIDRDRFVLSCGHASMLLYSLLYLSGYD
                     LSLDDIRKFRQWGSRTPGHPERGHTPGVETTTGPLGQGFGNAVGMAIAERFLAEHFNR
                     SDHPIIDHRVWAFASDGDLMEGVASESASIAGHLRLGKLTVLYDDNHITIDGDTALSF
                     SEDVPRRFEAYGWRVIKVSDGNDLPAISAAFETARNETARPTLIALRTVIADPAPEKR
                     NTAEAHGAPLGAEEVRRTKEIMGWPREPAFFVPEDALTHWRTAVGRGNELESSWRKNW
                     ESYTATYPDLARQLKQWMSGELPAGWDGELRELTPPTTPTATRQASGMALQTIAAAVP
                     NLVGGSADLGGSTGTTLKQGGTFGPGSSGRTFHWGVREHGMAACLNGIAAHGGLRVFG
                     STFLVFSDYMKPAIRLAAIMRLPVIYIGTHDSIGLGEDGPTHQPVEHLAMLRAIPNLV
                     TIRPADAAETIAAWQVALERRDGPTMLVLTRQKLPPVEQASATALEGVRRGGYVVLEP
                     GGQPEAILIGTGSEVSIALEAARLLSQQQIRTRVVSMPSWELFAKQPVSYRDSVLPPT
                     VRLRVAVEAAGPQGWSRWTTDDGAMLGMEGFGASAPGERLFQEFKLTPEHAAETVKQL
                     RAKGVR"
BASE COUNT          524 a          920 c          890 g          485 t
ORIGIN      
        1 ggtgccgtcg aggttgaacg agtatccggt ggggatgacg aacgccacaa tccgccgcgg
       61 aaccccgagc cgctccatgt tctccattcc cttcgggagc gcggcctcag aggatgtcgt
      121 cgcgaaggcg atcagcgctg gctccttgac catctggatg aactgcccaa tcggcacccc
      181 ggcaatcagc gccgccggca ccagggccac cagcacgaac acgatcaacg ccaggtagag
      241 ggtgaggacc agcttgccca gactgagcag gactcccagc ccgctctgac ccaccgtaaa
      301 cgcgatggcc gcgccgacac cgatcggcgc gtacttcatc acgatgcccg tgaacttgaa
      361 catcgtctcc gccaacccct cgcagaaccc gagcatcgcc agctttgggc cttcccgcac
      421 ctgggataag gcaaccgcaa agattatcga aaagaagacg atctggagca cttcgttgtt
      481 ggcggcagcc tcgaagaagc tctgggggac gatgtgctcc aggaaagaac tgaacgagat
      541 cgtgttgtgc gccagctcct ggccttgcgt ggccgaggcg gtgagctgca ccccgacacc
      601 aggccgggta aggttcacga ctgccagacc gaccatcagc gcaatggtcg tgatgagctc
      661 gaagtagatg atcgacttga gggcgagccg ccccacccgc ttcatgtcgt cgccgtgacc
      721 ggcaatgccg atcaccaggc tcccaaagat gatcgggacc acgatcgact tgatcattct
      781 gaggaagatg gtggagagcg gcttgaggct gatgccgagt tccgggcgcc accagccgat
      841 cagggcgccc agaatcatgg agatgagaat ccaacgggtc agtgagatcc ggcgcaggga
      901 tctccacagc cacttcatcg ggtgctcacc gcaccccctt ggcccgaagc tgcttcactg
      961 tctccgcggc gtgctccggg gtgagcttga actcctggaa gagccgctct ccgggcgccg
     1021 aggctccgaa tccttccatg ccaagcatcg cgccatcatc agtggtccag cgagaccagc
     1081 cctgcgggcc ggccgcttcc actgctaccc gtaggcgtac cgtgggcggc agtaccgaat
     1141 cacggtagct caccggttgc ttggcaaaca gctcccagga cggcatcgag acaactcgag
     1201 tgcgtatctg ctgctgtgac aggaggcgcg ctgcctccag agcgatcgat acctctgacc
     1261 cggtgccgat gaggatggcc tctggctggc ctcctggctc gagcacgacg tacccgcccc
     1321 ggcggactcc ctccagggca gtggcgctcg cctgctcgac gggcgggagc ttctgccggg
     1381 tgagaaccag cattgtggga ccatctcgtc tctccagcgc cacctgccag gccgcaatcg
     1441 tctccgccgc atcggcgggc cggatcgtca ccaggttggg aatcgcccgc agcatggcca
     1501 gatgctccac cggctggtgg gtggggccgt cctcgcccag gccgatcgag tcgtgcgtac
     1561 cgatatagat caccggcagc cgcatgatgg cagcgagacg aatggccggc ttcatgtaat
     1621 cggagaagac caggaaggtg ctgccgaaca ctcgaagtcc gccatgcgcg gcgatgccgt
     1681 tgagacaggc ggccataccg tgctctcgaa ctccccagtg aaaggtgcgc cccgagctgc
     1741 ccggcccaaa ggtgccgccc tgcttcagcg tggtgccagt gctgccaccg agatcggccg
     1801 agccacccac caggttgggg acggcagctg caatggtctg aagcgccatc cccgaggcct
     1861 gcctcgtggc agtgggggtc gtgggaggcg tcagctcacg gagttctcca tcccacccgg
     1921 caggaagctc gccggacatc cactgcttga gttgccgtgc gagatcggga tatgtggcag
     1981 tgtagctctc ccagttcttg cgccagctgc tttccaactc attgccccgc ccgacggcag
     2041 tacgccagtg cgtgagagcg tcttctggga cgaagaacgc gggctccctg ggccagccca
     2101 tgatctcttt ggtccggcgg acctcttcgg ctcccagcgg cgctccatgc gcctcggcgg
     2161 tgttgcgctt ctccggggcc gggtcggcga tcaccgttcg aagcgcaatc agtgtcggcc
     2221 gggcggtctc gttgcgcgca gtctcgaagg cggcgctgat ggccgggagg tcgttcccgt
     2281 cactcacctt gatcactcgc cacccgtagg cctcgaaccg acgggggaca tcctcgctga
     2341 acgagagcgc cgtgtctccg tcgatggtga tgtgattgtc gtcgtacagg accgtgagtt
     2401 tgcccagccg aaggtggccg gcaatggagg ccgactcact ggcaaccccc tccatcagat
     2461 cgccgtcgct ggcaaaggcc cagactcggt ggtcgatgat cgggtgatcg gagcgattga
     2521 agtgctcggc cagaaaacgc tccgcgatcg ccatcccgac cgcattgccg aagccttgtc
     2581 ccaaaggtcc ggtcgtcgtc tccactcccg gcgtatgccc ccgttcggga tgtcccggag
     2641 tgcgcgagcc ccactggcgg aacttcctga tgtcatccag cgaaagatcg tagccactga
     2701 gatacagcag cgagtagagc agcatggagg cgtgcccgca ggagagcacg aaccggtcgc
     2761 ggtcgatcca gtccgggttg tgaggattgt gtcgcagaaa gcgcgtccag agcagatag
//
LOCUS       DASRPQ010001389         1194 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1095399, whole genome shotgun sequence.
ACCESSION   DASRPQ010001389 DASRPQ010000000
VERSION     DASRPQ010001389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1194
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1095399"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..271
                     /locus_tag="VFD73_15880"
     CDS             <1..271
                     /locus_tag="VFD73_15880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75466.1"
                     /translation="LSQVYAAPDSFRVPKRYAVRASDGLLWIGTRESLQALLDARERA
                     RKLSVYADSSLARGGYDFLANDSSAVISRTGKWLTEWVKELGGAS"
     gene            complement(281..559)
                     /locus_tag="VFD73_15885"
     CDS             complement(281..559)
                     /locus_tag="VFD73_15885"
                     /inference="COORDINATES: protein motif:HMM:NF016234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HZI75467.1"
                     /translation="MRGRGNRAAGEVAGGNVRNMRNVGNRAAVEAAEGNVGNVFLTFL
                     RCIAGMPDYRAHVEHLRRCHPESPIPSEREFFEDYLQRRYQNGATRCC"
     gene            complement(549..>1194)
                     /locus_tag="VFD73_15890"
     CDS             complement(549..>1194)
                     /locus_tag="VFD73_15890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carbon starvation CstA 5TM domain-containing
                     protein"
                     /protein_id="HZI75468.1"
                     /translation="FAIMFEALFILTTVDTGTRVGRFMLQELAGHAWRPLGRTSWYPS
                     TLLASALVVAGWGYFLVQGVQDPLGGINSLWPLFGISNQLLAAVALCVGTTLLIKSGK
                     ARYAWVTLIPLAWLLTITLTAGWQKIFAADPRLGFLSHAAMTADQVASGAVPAARGAR
                     LIFNDRLDAVITVSFMVVTILVVLASAREWALILTRRKPATAKESPFVETAYAG"
BASE COUNT          235 a          374 c          389 g          196 t
ORIGIN      
        1 gctcagtcag gtctacgcgg caccggacag cttccgagtc cccaagcgct acgctgtccg
       61 agcgtcggac gggctgctct ggatcggcac ccgcgagagt cttcaagcgc tgctggatgc
      121 gagagaacgc gcacgcaaac tgagcgtcta cgccgattcg agtctggcgc gcggcgggta
      181 cgacttcctg gctaacgaca gctccgcggt gatctctcga accgggaaat ggctcaccga
      241 gtgggtgaag gagctgggag gtgcgagcta agagcgggag ctagcagcag cgggtggcgc
      301 cgttctgata gcgtcgctgt aggtagtcct cgaaaaactc tcgctcgctc gggatggggc
      361 tttccggatg gcagcgccgc aggtgctcga catgtgcgcg atagtcgggc atgccagcga
      421 tacatcgtag gaacgtgagg aacacgttcc ccacgttgcc ttcggcggcc tcgactgccg
      481 ctcggttccc cacgttcctc atgttcctca cgttgcctcc ggcgacctcg cctgcggctc
      541 ggttccccct accccgcata cgctgtctcc acaaaaggcg attccttggc cgtcgctggt
      601 ttccggcgag tgaggatcag cgcccattcg cgggccgagg cgagcaccac caggattgtc
      661 accaccatga aggagaccgt tattaccgca tccaaccgat cgttgaagat gaggcgagcg
      721 cctcgcgcag ccggcacggc gcccgaagcg acctgatccg ccgtcatggc agcatgggag
      781 agaaatccga ggcgaggatc ggcggcgaaa atcttctgcc acccagcggt cagcgtaatg
      841 gtgagaagcc aggccagcgg gatgagcgtc acccaggcgt agcgtgcctt gccgctcttg
      901 atgagcagcg tggtgccgac acagagcgcc accgcagcca acagttgatt actgatgccg
      961 aagagtggcc agagcgaatt gatgccgccc agaggatcct gcaccccctg caccaggaaa
     1021 tagccccagc ccgcaaccac cagcgcggag gcgagtagcg tgctgggata ccacgaggta
     1081 cggccgagcg ggcgccacgc gtggccggcc agctcctgga gcatgaatcg gcccacgcgg
     1141 gttccggtat ccacggtagt gagaatgaag agcgcctcga acatgatggc gaag
//
LOCUS       DASRPQ010001390         1244 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1747012, whole genome shotgun sequence.
ACCESSION   DASRPQ010001390 DASRPQ010000000
VERSION     DASRPQ010001390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1747012"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1135)
                     /locus_tag="VFD73_15895"
     CDS             complement(<1..1135)
                     /locus_tag="VFD73_15895"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HZI75469.1"
                     /translation="MKHTFPQINGLTMAAKKSQLAAIRALPFVKAAAVDAIINIPPNS
                     DLVPVSDFTNGFDTWDQDAINVTVAPLSTARAVSQTGRGVFVGILDTGLLFTWRQYFP
                     QERIATQYATSIVGGGAADRGSVHTSGGDAWQHDVCAHGTHVASTILGYRRTATVNFQ
                     GTAPEATVIPVQLHSEGSANSHNDCSFFSSVAAAGLLYFAQLKQGPLAGQPLVVNNSW
                     GSGNNDPLTEAAVNYALAHGVLLVFSAGNAGDAGMGYPGALPQVISAAASGFTGEWTA
                     CAGPGSEFSWWFLCNVPDPTNPSDFYITDFSSRELAGQDLDVAAPGSWVVGPFQLQRG
                     QPSFFFLGGTSMAAPHVTGTVALMLQKNPGLTESQAESIIEGSA"
BASE COUNT          256 a          377 c          382 g          229 t
ORIGIN      
        1 cagctgagcc ctcgataatg gactccgcct gggactcggt cagtccgggg ttcttctgta
       61 acatcagcgc gactgtgccg gtcacgtgcg gtgccgccat ggatgtgccg cccagaaaga
      121 agaagctcgg ctggccccgt tgcagttgga atgggccgac cacccacgac ccgggagccg
      181 ccacatcgag gtcctggccc gcgagttcgc ggcttgagaa gtcggtgatg taaaagtcgg
      241 aggggttggt cgggtccgga acattacaga ggaaccacca agagaattcg gaaccagggc
      301 ctgcacacgc cgtccactct ccggtgaacc cgcttgccgc ggcagagatg acttgcggca
      361 atgcgcccgg atatcccatg cccgcatcgc cggcattccc ggccgagaat accaggagta
      421 ctccgtgggc cagggcgtag ttcaccgccg cctcggtcaa cggatcgttg ttgccgctgc
      481 cccaactgtt attcaccacc agcggctgac cggccagcgg gccctgcttc agctgcgcaa
      541 agtagagcag cccggcagcg gcaaccgagc taaagaagct gcaatcgtta tgactgtttg
      601 cgctcccttc ggagtggagc tgcaccggta ttaccgttgc ctctggggca gttccctgga
      661 aattgacggt tgcagtacgc cgatagccga gaatcgtgct cgccacgtgc gtgccatggg
      721 cgcaaacgtc atgctgccac gcgtcgccac cggaggtgtg cacgctgccc cggtccgccg
      781 ccccgccacc gacaatggaa gtagcatact gcgtagcgat ccgctcctgg gggaagtact
      841 gacgccaagt gaagagcagt ccagtgtcga gaatgcccac aaacaccccc cggccggtct
      901 gagacacagc gcgggctgta ctcaaaggag cgaccgtgac gttgatcgcg tcctggtccc
      961 aggtgtcgaa cccgttggtg aagtccgaga cagggaccag atctgagttg gggggaatgt
     1021 tgatgatggc atctactgct gctgccttga cgaacggaag agcgcggatt gctgccaact
     1081 ggctcttctt ggcagccatg gtcaacccgt tgatctgagg aaaggtgtgc ttcaccgtac
     1141 caattgtatt caaacgagca aactgactct gggtcgcgcg acctttgagc acgacgttaa
     1201 taccaacaac agcgctaccc gagttgctca gcgaaggatt ggca
//
LOCUS       DASRPQ010001391         1184 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3626479, whole genome shotgun sequence.
ACCESSION   DASRPQ010001391 DASRPQ010000000
VERSION     DASRPQ010001391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3626479"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(89..580)
                     /locus_tag="VFD73_15900"
     CDS             complement(89..580)
                     /locus_tag="VFD73_15900"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske (2Fe-2S) protein"
                     /protein_id="HZI75470.1"
                     /translation="MTQEPQTDSLATRRGMLAGVGLVGLASAITACGASGSSSSTPAA
                     TTPGGPASSAASGAASGGASSAPAGNALASTSQIPVGSGMIFSGQQVVVTQPSAGEFK
                     AFSAVCTHMGCIVNQVSDGTIDCPCHGSQYSIKTGDVVAGPAPKPLPAKQIKVSGSSI
                     FLE"
BASE COUNT          210 a          371 c          389 g          214 t
ORIGIN      
        1 gggacgtcga acgagaccac cgtccccatt accggctcgg cgtgccgcac gcgggcggcg
       61 aaggctgtgt tgttcaagaa aggaattctt actctaggaa gatgctgctg ccggagacct
      121 tgatctgctt ggccggcagc ggcttcggcg ccggccccgc gacgacgtcg ccggtcttga
      181 tgctgtactg gctgccgtgg cacgggcagt cgatggtccc gtcgctgacc tggttgacga
      241 tgcaccccat gtgggtacag acggcgctga acgccttgaa ctcgccggcc gagggctggg
      301 tgacgaccac ctgctgccca gagaagatca tcccgctgcc gaccgggatc tggctggtgc
      361 tggcgagcgc gttgcccgcg ggggcgctgc tcgcaccgcc ggacgcggcc ccggacgccg
      421 cgctgctcgc cggcccgccg ggagtggtcg cggcaggagt gctgctgctc gagccgctag
      481 cgccgcaggc ggtgatcgcg ctcgcgagac ccaccaggcc gacaccagcc agcatgcccc
      541 gtcgagtagc cagcgagtcc gtctgtggtt cctgtgtcac gattgctcct attcgcatgt
      601 gtggccgctg atgcggatgg gacaactccc gtcgcccttg cctcctgtat aaggaacggg
      661 gcccggcggc gcacggttca tcgccgggtt cttagggtcc cgtaacccgg ctaggggaac
      721 ccgaggacaa gctctgcggc tccgctgtga ccaaggtcac tatctcgacg attgcggagc
      781 gtaacgctgg cggccgcggt gacggttcgc aggaaagaga attcggtcat ccagaacggg
      841 ttcgctcttc gaattatcgc gactaactgg actaataggg catatgtagc attttagcta
      901 tgtattactt actaactagc cataccccta tgtccttacg gagagtatcc aaaaccgtac
      961 gtagcgccat aatcttggca gagtaggcat cacggatggg acacggacaa atgctaagag
     1021 ttagcatggc cgacgggtgg ctgaaccggc ctcgtggctc ggagcccgcc cgccccgaca
     1081 tgcccgctca aggcacccac gtgccggatc ccgtgttcag gagccccgtg tccaggagca
     1141 cagggtgatc atccggagcc acggcgaaga ctgcgggcgg agtg
//
LOCUS       DASRPQ010001392         1675 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1747488, whole genome shotgun sequence.
ACCESSION   DASRPQ010001392 DASRPQ010000000
VERSION     DASRPQ010001392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1675
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1747488"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1470
                     /locus_tag="VFD73_15905"
     CDS             <1..1470
                     /locus_tag="VFD73_15905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HZI75471.1"
                     /translation="EIFPAYAEQAIRIELWGDEVERISKINPLTGQTIVQLDQCVIYP
                     AKHFVTQRPTIERAVKVIREELAVRLAELRAAGKLLEAQRLESRTSFDVEMLLEVGTC
                     AGIENYSRHLTGRREGERPACLLDYFPADYLVVVDESHVSLPQIGGMYNGDRARKLTL
                     VEYGFRLPSALDNRPLHFDEFMTLVPQMINVSATPGEYELQLSGGVVVEQIIRPTGLV
                     DPAVDVRPVRGQVDDLLAEIRLRESRSERVLVTTLTKRMAEDLTDYLQQAGVRVRYLH
                     SDIDAIERMEILRGLRLGDFDVLVGINLLREGLDLPEVSLVAILDADQEGFLRSDRSL
                     VQTIGRAARHINGRAILYADRITGSMQRALDEMDRRRSLQQAYNEEHNITPVSIVKSM
                     EEVRLSTHVADARTERPEPKRALQDRIDLHDPSKRAAAISTLERQMREAAANLEFELA
                     AMLRDQLNDLKALEAPDVHRAGLASAGDGVSVRPLRRRA"
     gene            1467..>1675
                     /locus_tag="VFD73_15910"
     CDS             1467..>1675
                     /locus_tag="VFD73_15910"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:NF014426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HZI75472.1"
                     /translation="MRQSLTRAELDAVGEAVGRSLHPGELVTFEGDLGAGKTTLIQAV
                     VRGLGVRQPATSPTYALVHRYQGARG"
BASE COUNT          301 a          515 c          566 g          293 t
ORIGIN      
        1 gagatcttcc cggcctacgc cgagcaggcg attcgcatcg agctgtgggg cgacgaggtc
       61 gagcgcatca gcaaaatcaa tccgctcacc ggccagacca tcgtccagct ggatcaatgc
      121 gtcatctatc ccgccaagca cttcgtcacc cagcgtccta ccatcgagcg cgcggtcaag
      181 gtcattcggg aagagctggc cgttcgcctg gcggagctga gagccgccgg caagctgctg
      241 gaggcgcagc ggctcgagtc caggacatcg ttcgatgtcg agatgttact cgaagtgggg
      301 acctgcgcag ggatcgagaa ttattcccgg catctgacgg ggcggcgcga aggagagcgt
      361 ccggcctgcc tcctggacta tttcccggca gactacctgg tggtggttga cgagtctcac
      421 gtcagtctcc cccagatcgg cgggatgtac aacggagacc gggcccgaaa gctcaccctg
      481 gtggagtacg ggtttcgtct gccctcggca ctggacaatc gtccgttgca tttcgacgag
      541 ttcatgacgc tggttccgca gatgatcaat gtgtctgcca ctccgggcga gtacgagctg
      601 caactctcgg ggggcgtcgt tgtagagcag atcatccgtc ccaccgggct ggtcgacccg
      661 gcggtagatg tccggccggt gcgggggcaa gtggacgatc tgctcgcgga aattcggctc
      721 cgggagtcgc ggagcgagcg cgtgctggtg acgaccctga ccaagcggat ggcggaagat
      781 ctcaccgact atctgcagca ggccggcgtg cgggtgcgct atctccactc cgacatcgac
      841 gctatcgaac ggatggaaat cctccgaggc ttgcgccttg gcgatttcga cgtgctggtc
      901 ggaatcaacc tgctgcggga ggggctcgat ctgccggagg tgtcactggt cgccattctg
      961 gatgccgatc aggaaggctt cctgcgctcc gaccgctccc tggttcagac gatcgggcgc
     1021 gcggcgcggc acatcaacgg aagagcgatc ctctatgccg atcggatcac cggctccatg
     1081 cagcgagcgc tggatgagat ggaccgccgc cggtcgctgc agcaggcgta caacgaggag
     1141 cacaatatca cgccggtctc gatcgtgaag tccatggagg aggtcagact ctccactcac
     1201 gtcgccgatg ccaggaccga gcggccggag ccgaagcgcg cgctgcaaga ccggatcgat
     1261 ctccacgatc cctccaagcg tgcggccgcc atcagcacgc tcgagcgcca gatgcgggag
     1321 gcggcggcca acctggagtt cgagcttgcc gccatgctgc gggatcagct taacgatttg
     1381 aaggctctag aggcgccgga cgttcaccgg gccggcctag cttccgcggg cgatggggta
     1441 tcggttcgcc cgcttcggcg gcgggcatga gacagtcgct gacccgagcc gagctcgacg
     1501 ccgtgggaga ggcagtgggt cggtcgttgc atcccggcga gctcgtcacc ttcgaaggcg
     1561 atctcggagc agggaagacc acgctcatcc aggcggtggt gcgtggtcta ggcgtgcggc
     1621 agccagccac cagtccgacg tatgcattgg tgcatcggta ccagggcgcc cgcgg
//
LOCUS       DASRPQ010001393         1997 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_164547, whole genome shotgun sequence.
ACCESSION   DASRPQ010001393 DASRPQ010000000
VERSION     DASRPQ010001393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164547"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..211
                     /locus_tag="VFD73_15915"
     CDS             <1..211
                     /locus_tag="VFD73_15915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75473.1"
                     /translation="DYPKKTEVTYLADAQTMLNFAQANGMNLLSVWAIQRDNGGCPGS
                     RDSNTCSGIAQSTWDFSHLLEPFTS"
     gene            complement(246..1067)
                     /locus_tag="VFD73_15920"
     CDS             complement(246..1067)
                     /locus_tag="VFD73_15920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75474.1"
                     /translation="MATQNSAILENTHSRYPGSRDEAYTRSYRIIRLVVGFLGVLLPL
                     IFILVEAYLLKGGVHVRGSLSAYYHSPLQDVFVAGLCVIGVLLATYMSGEWKTSDFWV
                     SLIGGVAVLGVVFFPTMRAGLPKDAPLCGSLPQPPSCSFVEQQLGEHTAAVIHAGCAV
                     VFIASLAVMSFLFAASEVQPTNGRAMVPGKRWFRSQTRRWIYIVCGLIIVAAGAWAFW
                     GAGVGQLTPLYIGEVASVWAFGISWLLAGFSLMAPARHEARVSDDSAPLASATTR"
     gene            complement(1192..1407)
                     /locus_tag="VFD73_15925"
     CDS             complement(1192..1407)
                     /locus_tag="VFD73_15925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75475.1"
                     /translation="MTYAGWRTGDQVVPSAEWRSTIPLAEHDSVGGAASFLKWRSPPG
                     LHIEFRRAPACISIPAMGLHTPDGLSN"
     gene            1621..1992
                     /locus_tag="VFD73_15930"
     CDS             1621..1992
                     /locus_tag="VFD73_15930"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZI75476.1"
                     /translation="MTRKHFLRGVGAAWAGGLVVGGVAGYFGGRASESMTTTQATAST
                     SKEPLVIGSGVPVTGVYAGDGQQMLRGQQLAVAEINAAGGVLGQPLKLAILDTKAHTR
                     SSAIPASRCFTSTPGTATSIS"
BASE COUNT          401 a          652 c          631 g          313 t
ORIGIN      
        1 cgactacccg aagaagaccg aggtcaccta cctcgctgac gcgcagacga tgctgaactt
       61 cgcccaggcg aacggcatga acctcctgtc cgtctgggcg atccagcgtg acaacggcgg
      121 ctgcccaggc agccgcgaca gcaacacctg ctccggcatc gcccagagca cctgggactt
      181 cagccaccta ctcgaaccct tcaccagctg accagcatct ggctggcatt cgggtttcta
      241 cagactcagc gcgtcgtcgc cgacgcaagg ggagctgagt cgtcgctcac gcgggcctcg
      301 tgcctggccg gtgccatcag ggaaaatccc gctagcagcc acgagatgcc gaaggcccag
      361 acggaagcga cctcgccgat gtagagcggc gtcaattgcc ccaccccggc accccagaat
      421 gcccaggcgc cggcggccac gatgatcagt ccgcacacga tgtagatcca gcgccgggtc
      481 tggctgcgga accaccgctt gccggggacc atggcccgtc cattcgtggg ctggacctcg
      541 ctggcggcga agagaaaact catgacggcc agggaggcga tgaacaccac ggcgcaccct
      601 gcatgtatga ccgccgcggt gtgctcaccg agttgctgct ccacgaagga gcaggaaggc
      661 ggctgcggaa ggctgccgca cagtggcgcg tctttgggca ggcccgcccg catggtgggg
      721 aagaatacga ctccgagaac cgcgacgccc ccgatgagac tcacccagaa atccgatgtc
      781 ttccattcgc cggacatgta cgtcgccaga agcacaccaa tgacacacaa gccggcgacg
      841 aatacgtcct gcaacggcga atggtagtac gcgctcagcg acccccggac atggacgcca
      901 cctttcagca gatacgcctc aacgaggatg aagataagag gcagcaatac acccaggaac
      961 cccaccacca ggcggatgat ccggtaagaa cgagtgtacg cttcatcccg gctgccagga
     1021 tatctgctgt gcgtgttttc aaggattgct gaattctggg tcgccatggc ctgtctcctc
     1081 acaagcgcta agtgatcctg tgacaattct cgccactgat tgcccccaat ggcatgggac
     1141 aggaagtgac gtacacaacg gggatcttcg ctcccatgac agtgactgct cttagttgct
     1201 gaggccgtca ggagtatgga ggcccatcgc cgggatgctg atacatgctg gagcccggcg
     1261 gaattcgata tgaagccctg gcggcgatct ccacttgaga aagctggcgg caccgccaac
     1321 ggaatcgtgc tccgccaacg gaatcgtgct ccgccactcg gccgacggca ccacctggtc
     1381 gccagtccgc caccccgcgt aggtcatgag cctgacgggc ggcggcgcgg tgctgtgggc
     1441 ctgcgccggg gccgggctgc cctcggccag cgcgggagaa tacgtcagtt gacggatggt
     1501 agcggccgag tcgccgggat gaagctatag gtcaatttcg tcagcccgga acccgtctgg
     1561 tacgtccgag ggggcgatcg cgtgacagcg aaccaggatc gcgcaacaag acagcctggt
     1621 atgacgcgca agcacttcct gcggggcgtc ggcgcggcct gggcgggcgg gctggtggta
     1681 ggtggcgtcg ccggttactt cggcgggcgc gcctcggaga gcatgaccac cacccaggcc
     1741 accgccagca ccagtaaaga gccgctcgtc attggctcgg gggtccccgt gaccggcgtg
     1801 tatgcgggcg acggccagca gatgctgcgg ggccagcagc tcgcggtcgc cgagatcaac
     1861 gccgcgggcg gcgtgctcgg ccagccgctt aagctcgcca tcctcgatac gaaggcccat
     1921 acccggtcgt cggcaattcc ggcatcccga tgtttcacgt caacacctgg cacggcaacg
     1981 tcgatttcgt gaagcag
//
LOCUS       DASRPQ010001394         2115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4556664, whole genome shotgun sequence.
ACCESSION   DASRPQ010001394 DASRPQ010000000
VERSION     DASRPQ010001394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4556664"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..912
                     /locus_tag="VFD73_15935"
     CDS             <1..912
                     /locus_tag="VFD73_15935"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HZI75477.1"
                     /translation="VLADTGTSTKCLVRAPPQKTSRRSRKTIQKPDSLIVRHNCYAFR
                     TPTALAPRLVEAGFTHLNLANNHANDLGPAGRASTERTLDSLGITFYGPLQRIVIDTV
                     RRGDSLTTVGIIGFTTYPFAYDLLDIDRSAAVVDSIRPLVDLLLVTFHGGAEGVRALR
                     TGEAAESLGAEPRGDLRRWARAVIDAGADAVIGHGPHVLRGMEFYRGKLIAYSLGNFL
                     TYRGFNLDGPLGVTGVLQVEFSGQGSLRRARIVPMVQVPQRGPEPDPDRAAVALVRRL
                     SAQDFGATAARIGPIGEIAAPPPDLKP"
     gene            961..1551
                     /locus_tag="VFD73_15940"
     CDS             961..1551
                     /locus_tag="VFD73_15940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75478.1"
                     /translation="MISDEDEAGEEETSPVPAAIAATAEPVQLSVRLVEDDRVPAEMV
                     CMGTYRNGRLVARSVMSPEAWQQILEHRLFDEPLQVVLVARVAPPGLQCQLFAMVPLP
                     EDEAEDPAEPWASSVPSSSYEATVGESPEEEDPRVAPVPLGNIVRYQRDRVHPDSLPL
                     ETADILKKIVEGETAEVVDRALADLLGIDDRDEKEN"
     gene            complement(1564..>2115)
                     /locus_tag="VFD73_15945"
     CDS             complement(1564..>2115)
                     /locus_tag="VFD73_15945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75479.1"
                     /translation="RLAADTGSAPRTESRRPVPRIGPGLAEGKLWVRPLPLPPRELAQ
                     RLSRSHAALVDSAVTSIVQAYLDSIASDPAAKNAALPSWTTQIAGKKFGLDSKNIYIA
                     GLKIPAAVLALLPIPAGNIDQNRAYNHLMDLRNDLMYAAQRAETMEEFKTMIREMRER
                     KEREREFEKNQRTAPPPEEPPTP"
BASE COUNT          364 a          666 c          692 g          393 t
ORIGIN      
        1 gtgctggccg atacgggaac ctcgaccaag tgcctggtca gggcaccacc ccagaagacg
       61 tcgcgccggt cgcgtaagac cattcagaag cccgattcgc tgatcgtccg gcacaactgc
      121 tatgcctttc gcactccgac cgccctggca ccccgtctgg tcgaggccgg atttacccat
      181 ctcaatctgg cgaacaatca cgccaacgat ctgggcccgg caggaagagc ttcgaccgag
      241 cgaacgctcg atagtctcgg tatcaccttc tacggaccgc tacagcgaat cgtcatcgac
      301 accgtgcgcc gaggtgacag tctgacgacg gtgggaatca tcggattcac cacctatccc
      361 tttgcctacg atctcctgga catcgatcgc agcgcggcag tggtggattc cattcgaccg
      421 ctggttgatc tgcttctggt cacctttcac gggggagcgg agggggtacg cgcactccgc
      481 accggcgagg ccgccgaatc gcttggcgcc gagccccgag gcgacctccg gcgctgggcc
      541 cgggcggtga tcgatgccgg agccgacgcg gtgatcggcc acggtcctca cgtgctccgc
      601 ggcatggagt tctaccgggg caagctgatc gcgtactcgc tgggaaattt cctgacctat
      661 cgggggttca acctggacgg cccactcggc gtgactggcg tcttgcaggt cgaattcagc
      721 ggacagggtt cgctccggcg cgcgcgcatc gttcccatgg tacaggtgcc gcagcgtggc
      781 cccgagccgg atccagaccg tgcggcggtg gctctggttc gtcggctctc cgcacaagac
      841 ttcggagcaa cggcggctcg cattgggccg atcggcgaga ttgcggctcc cccgcccgac
      901 ctcaagccat agctgtactc ttgccttgcc cggggacgcg ggtcagccta ctgattcgat
      961 atgatatcgg atgaagatga ggccggcgag gaagagacgt cgccggtacc ggccgccatc
     1021 gcggcaacgg cagagccagt ccagttgagc gtgcgtctgg tcgaggacga tagggtcccg
     1081 gcagaaatgg tgtgcatggg cacctaccgc aacggacgac tggtggcacg ctcggtgatg
     1141 tcccccgaag cgtggcagca gatcctcgag cacaggctgt tcgacgagcc gctgcaggtt
     1201 gtgctggtgg cgcgagtggc gccgccgggc ctccaatgtc aactgtttgc gatggtaccc
     1261 cttcccgaag acgaggctga ggacccggca gagccgtggg cctccagcgt tcccagttcg
     1321 tcgtatgagg caaccgttgg ggagtcgccc gaggaggagg acccccgagt cgccccggtc
     1381 ccgctgggaa acattgtgcg ttaccaacgc gaccgggtgc accctgacag tctgccgctg
     1441 gagacggctg acatcctgaa aaagatcgtg gagggagaga ccgcggaggt agtcgaccgc
     1501 gccctggccg acctgctggg cattgatgat cgagacgaga aggagaactg agggctcagt
     1561 ctgtcaggga gtcggcggct cctccggtgg cggcgcggtt cgctgattct tctcgaactc
     1621 acgctcccgc tccttccgct cccgcatttc ccgaatcatg gtcttgaact cctccatggt
     1681 ttcggcgcgc tgggcagcgt acataagatc gttccgcagg tccatcaagt gattgtacgc
     1741 gcggttctga tcgatgttcc ccgccggaat gggaaggagt gccagcaccg ccgccgggat
     1801 cttgagtcct gcgatgtaga tgttcttcga gtccagcccg aatttcttcc ccgcaatctg
     1861 ggtcgtccaa ctcggcagtg cggcgttctt cgccgctgga tcgctggcga tcgagtcgag
     1921 ataggcttgg acgatactcg tcaccgcact gtcgaccagc gctgcgtgac tccgggagag
     1981 ccgctgggct aactcccggg gaggtagcgg gagcggccgc acccagagtt tgccttcagc
     2041 aaggccggga ccgattcggg gcactggtcg acggctctcc gtacggggag cgcttccggt
     2101 atcggcggcc agtcg
//
LOCUS       DASRPQ010001395         1291 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3322367, whole genome shotgun sequence.
ACCESSION   DASRPQ010001395 DASRPQ010000000
VERSION     DASRPQ010001395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1291
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3322367"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..789
                     /locus_tag="VFD73_15950"
     CDS             <1..789
                     /locus_tag="VFD73_15950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75480.1"
                     /translation="REFADRFAGRVAGLVVHDKREMGAQTDRLLAAMRELNARLCEQP
                     GGPLVFLEYAAGLDRGWFIEVAERLQHAERVSYCIDVGHIGLRQAAARFGDSHPGLDL
                     KKLGSMDDRLPDLMADIQDAVGSALPHVLDVTRSLGRLGKHVHFHLHDGHPLIPGLRD
                     HFSFLTRLPIPFTYQGRRSLSMMYGPGGLASIVSTAIEACPPQEVSFTAEIHQVEGRL
                     PLADAAWLFPHWRDTTNAERMNYWLSVLSENAMLISQHADYARV"
BASE COUNT          230 a          439 c          395 g          227 t
ORIGIN      
        1 agggagttcg ccgatcgctt cgcagggcgc gtcgccggct tggtcgtcca cgacaaacgt
       61 gagatggggg cacagacaga ccgcctgctt gccgcgatgc gcgagctgaa tgcccggctt
      121 tgcgagcagc cgggcggtcc cctcgttttc ctcgagtacg ccgccggact ggatcgcggc
      181 tggttcatcg aggtggcgga gcggctccaa cacgctgagc gggttagtta ctgcatcgac
      241 gttggccaca tcggcctgag acaagcggcc gccaggttcg gagacagcca tcctggcctg
      301 gacctcaaga agcttggctc aatggacgac cgcttgcccg acctgatggc ggacatccag
      361 gacgcggtgg gaagcgcctt gccgcatgtg ctcgacgtca cgcgctcact tggtcggctc
      421 ggcaagcacg tgcacttcca cctgcacgat gggcatcccc tcatcccagg ccttcgggat
      481 cacttcagtt tcctgacgcg gctgcctatt cccttcacct accaaggccg tcgatcactg
      541 agcatgatgt acgggccagg cggccttgcc tccatcgtgt caacagccat tgaagcatgc
      601 cccccacagg aagtctcctt cacagccgag atccaccagg tcgaaggtcg gctgcccctc
      661 gccgacgccg catggctctt tccccactgg agggacacca cgaatgccga acggatgaac
      721 tactggctct cggttctgtc tgagaatgcg atgctcatat cccagcatgc tgattacgcc
      781 cgtgtataac cagccggtac agcccgattg aaccggcaac ctctttctcc cagccataca
      841 ggtctgggcc actggcgatg acactgtgat cgaacaagag acccaaacaa ggatcgacgt
      901 gaccacgacc acccccgtcg atgagatcgg ctttctcgat cgagcccgtg ccggtcggcc
      961 cattccgatt gcgccaccgc gccgcggaag gcaccgactt ggcgaccggg tggatcacgt
     1021 gaccacgctg tcggccacta ctttcgcatg tggggcgctt gcccctggcc ggtgacttgt
     1081 cgtgagcgtt ccgcaagcgc ggggcggcac gggcgccagc gacagcccgt catgccccga
     1141 gagccaagaa ggagtgcgcg gtggcttctg ccaggacgtc ccccaaggtc gcccgccgcc
     1201 cggccagcag cgcctcgggc agcgcggcac ccttttcaag cgcatcgtgc agggccagca
     1261 tgagcgggac cgcggccggg tcgttgaccg g
//
LOCUS       DASRPQ010001396         1869 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3626958, whole genome shotgun sequence.
ACCESSION   DASRPQ010001396 DASRPQ010000000
VERSION     DASRPQ010001396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3626958"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(12..389)
                     /locus_tag="VFD73_15955"
     CDS             complement(12..389)
                     /locus_tag="VFD73_15955"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZI75481.1"
                     /translation="MLGGKEAVATIAVRDLQAAKRFYEGTLGLKPIAAQEQEALTYQA
                     GSAKVLVYRSQYAGSNQATAATWLVGNDLEKVVQALRGKGVTFEHYSLPGLTLKGDIH
                     EGGGMKAAWFKDPDGNIHALVTG"
     gene            complement(376..828)
                     /locus_tag="VFD73_15960"
     CDS             complement(376..828)
                     /locus_tag="VFD73_15960"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZI75482.1"
                     /translation="MDHTIVHFEIPADQPERAAQFYRDLFGWEISKWEGSADQRDGFE
                     YWTVRTVPTDEKGMPTRPGVNGGLMRRMFPGQAPVNYVVVENVDDYVRRAQKLGAKLM
                     MEKTPVPSMGWFAQLTDPEGNVFAVWETDSNAGQAAAAASGESRNAGR"
     gene            1032..1712
                     /locus_tag="VFD73_15965"
     CDS             1032..1712
                     /locus_tag="VFD73_15965"
                     /inference="COORDINATES: protein motif:HMM:NF028235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HZI75483.1"
                     /translation="MPKPRAKQRKREPDVTREKLLQSAFAEIYRKGFQAASLDVILTN
                     AGVTKGALYHHFPDKAALGYAVVDDVVRGLLLQRWLGVLERQPGDPVSALQSMLQERT
                     TRLTSQEVMLGCPLNNLGQEMAPLDERFRQRVSATFETWVDGFAKVLARGQRDGTVRK
                     DVDARRFATFLVAAIEGSFGLAKSSGSKAMLRSNLDVLRFVLDTLRPHRQSEGERGRK
                     PGSLRKRR"
BASE COUNT          349 a          574 c          576 g          370 t
ORIGIN      
        1 cagcatgatg gttatcccgt gacaagggcg tggatgttgc cgtcgggatc cttgaaccag
       61 gctgccttca tgcctccgcc ctcgtggatg tcacccttga gggtgaggcc cggcagcgaa
      121 tagtgctcga atgtgacgcc cttgcccctg agtgcctgca ccaccttttc cagatcgttg
      181 ccgacgagcc aggtggcagc ggtagcctga ttgcttccgg catactgcga gcgatacacc
      241 agaacctttg cgctgccggc ctggtacgtc agcgcctcct gctcctgggc ggcgatgggt
      301 ttgaggccga gcgttccttc gtagaagcgc ttggcagcct gaaggtcccg aacggcaatg
      361 gtggcaaccg cttctttacc gcccagcatt gcgtgactca ccactggcgg cggccgctgc
      421 ctgacccgcg ttgctgtcgg tctcccaaac cgcgaagacg ttgccctccg gatcggtcag
      481 ctgggcaaac caccccatgc tcggtaccgg ggttttctcc atcatgagtt tggcccccag
      541 cttctgagcc cggcgaacgt agtcatccac gttttccacg acgacgtagt tgaccggtgc
      601 ctgacctgga aacatccgac gcatcagccc gccattcacc ccggggcgcg tgggcatgcc
      661 cttctcgtcg gtgggcacgg tccgcaccgt ccagtactcg aacccgtctc gctgatcggc
      721 cgacccttcc cacttgctga tctcccatcc aaacaggtcg cggtagaact gcgctgcccg
      781 ctccggctgg tcggcgggaa tctcgaaatg cacgatcgta tgatccatgg tgccctccaa
      841 tctgaaacaa tggttcgttg ccactcatcc ccttacaaac cgtttggtat gtatcgctcg
      901 gcgaaacggc cgtcaagacc tcttgccgac cgaaagcgag atcgttacat accaatcggt
      961 ctgaaagtga cgccggtcgt tttggcgcga cagccataag atggctccgg agcggtgcga
     1021 gagacagagt catgcccaag ccaagagcaa agcaacgcaa gcgcgaaccg gatgtcaccc
     1081 gcgagaagct ccttcagtct gcgttcgcgg agatttatcg caaggggttc caggcggcca
     1141 gcctggatgt gattctcacc aacgccgggg tgaccaaagg ggcgttgtac catcacttcc
     1201 ccgataaggc agccttgggg tacgcggtgg tggatgacgt ggtccgggga cttctcctcc
     1261 agcgctggct cggggtgctg gaacgccagc ccggcgatcc cgtgtcggcg ctgcagagca
     1321 tgttgcagga acggacgact cgactaacct cccaggaggt gatgctcggt tgtcccttga
     1381 ataacctggg acaggagatg gcacccctcg acgagcgatt ccgccaacgg gtgagcgcca
     1441 ccttcgagac ctgggtcgac ggctttgcga aggtgctcgc gcgggggcag cgggacggca
     1501 cggtgaggaa ggatgtcgat gcgcgccgct ttgccacctt cctcgtggcg gcgatcgagg
     1561 gctcctttgg tctggcgaag agctccggca gcaaggcgat gcttcgctca aacctggatg
     1621 tgctgagatt tgtcctcgac acccttcgcc cgcaccggca gagcgagggg gagcgcggcc
     1681 gaaaacccgg gagcctgcgc aagcggcggt agatcaaacc ccggttgaca gatcgcgcga
     1741 tattgcctac gatatatcgt aagttagatc gcaagacatt gcgggaagct cacgagagga
     1801 aatctatgtg taacccaaga gacgattggg gttttggtcc cgggttcccg tttggagccc
     1861 gctggtggg
//
LOCUS       DASRPQ010001397         3139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4229424, whole genome shotgun sequence.
ACCESSION   DASRPQ010001397 DASRPQ010000000
VERSION     DASRPQ010001397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3139
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4229424"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..858)
                     /locus_tag="VFD73_15970"
     CDS             complement(<1..858)
                     /locus_tag="VFD73_15970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75484.1"
                     /translation="MIKVSDFTDNGVGVIHTTGPKTVKLARKYAPLVPVLADLIARLD
                     TPLPHPVKARILGQLRTAQERFAVIASTCRSADGSLSSRAVGQRNAGDDTRRRIPGHQ
                     AKPLVRRPSRRAAPIADGPGDACCPAPRCVSLPGGNRGGMGAGRRHARKVVVDRSEGF
                     GERLLGALLDRAHQMPPQLIAPLVAEEAARIGGREVCILLQDYGQWMLQPLPGRRLTA
                     GEPEPVDGSMAGRAFLRMTVVEERRDDGVRLYLPLLDGSDEVGVLALTLDRVDDDDRR
                     LLRRLAGLVA"
     gene            867..1052
                     /locus_tag="VFD73_15975"
     CDS             867..1052
                     /locus_tag="VFD73_15975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75485.1"
                     /translation="MDYRARHPQDLRLAAAALDVHPRVAMRILRHSKIAITMEVYTKA
                     PSEATRDVLHRLGDMLA"
     gene            complement(1544..1615)
                     /locus_tag="VFD73_15980"
     tRNA            complement(1544..1615)
                     /locus_tag="VFD73_15980"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1581..1583),aa:Val,seq:cac)
     gene            2142..2576
                     /locus_tag="VFD73_15985"
     CDS             2142..2576
                     /locus_tag="VFD73_15985"
                     /inference="COORDINATES: protein motif:HMM:NF016564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsgA family sporulation/cell division regulator"
                     /protein_id="HZI75486.1"
                     /translation="MNSSSTVSAELGLRLVVPQQTIVPLVASLYYSKEDPYAIRIAFH
                     VGLDEPVEWIFARELLSSGIEGREGHGDVVVWPSAGSADGTGGKVLNIELSSPFGQAH
                     FEAPSKEISDFLKRTYAIVPAGEETDFVDVETELTELLRKAQ"
     gene            3003..3075
                     /locus_tag="VFD73_15990"
     tRNA            3003..3075
                     /locus_tag="VFD73_15990"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3036..3038,aa:Gly,seq:gcc)
BASE COUNT          580 a         1058 c          981 g          520 t
ORIGIN      
        1 agcgaccagg cccgcgagcc gccgcagcag ccggcggtca tcatcatcga ccctgtcgag
       61 ggtgagggcc agcaccccta cctcgtcgct gccgtccagc agcggcaggt acagccgcac
      121 cccgtcgtcc cgccgctcct cgaccacagt catgcgcagg aaggcccggc cggccataga
      181 gccgtcgacc ggctcgggct ctcccgccgt gagccgccgg cccggcagcg gctggagcat
      241 ccactggccg tagtcctgca ggagaatgca cacctcccgc ccgccgatcc tggccgcctc
      301 ctccgcgacc agcggggcga tcagctgggg cggcatctga tgagcccggt ccagcagcgc
      361 gcccagcagc cgctcaccga acccctccga ccggtccacc accaccttgc gggcgtgccg
      421 cctccctgcc cccatgccac ctctatttcc ccctggcaag ctcacacacc tgggggcggg
      481 gcagcaggcg tcacccgggc catcggcaat gggtgcagct ctcctggagg gacgtctgac
      541 taggggtttt gcctgatgac ccggtatgcg gcgacgtgta tcatcgccag cgttccgctg
      601 gccgactgcc cgtgaggaca aggatccgtc cgcgctccgg catgtggagg cgatgaccgc
      661 gaatcgttcc tgggcggtgc ggagctgacc gaggatgcgc gccttgaccg ggtgcgggag
      721 gggcgtgtcc aggcgggcga tgaggtcggc cagcacgggg acgagcggcg cgtacttgcg
      781 ggcgagcttg accgtcttcg ggccggttgt gtggatcacg ccgacgccgt tgtcggtgaa
      841 gtccgagacc ttgatcactc tcgcccatgg attaccgtgc acggcacccg caagacctgc
      901 gcctcgctgc tgccgccctc gacgtccacc cccgcgtcgc catgcgaatc ctgcggcaca
      961 gcaagatcgc catcacgatg gaggtctaca ccaaggcacc gtccgaggcc acccgtgacg
     1021 tgcttcacag gctaggggac atgctcgcgt gactgctgct gccaccatcg ccaaacgctg
     1081 gcgggtgctg cggaaggcaa ggcttccgat agccccgctg ccatccgttc gctcctgcaa
     1141 ccatcctccg ctaccgctca gtaatttttg agctgacctt gatggaccgt tcagcatgcc
     1201 agtcgatact ggattggacc ggcgagttgc taggcgatgg tttccggcag ccccaggaat
     1261 cactcgcggg aaaggcgacc atcggcgaca gacagtgccg cgtcaataac caaaggtaat
     1321 tgtgagtgca ctagccggta ccgggagacg gcccgccgga ggcatgcttg gggccggcca
     1381 cgacgacatc gggccgcacg caagcgactc tcgacagtga ggctgacatc acccagctaa
     1441 gagggagtca tgacgtcacg gctacggacg gttgctgccg tttactgctg ccggaagatc
     1501 aaaaagaccg gttcctgaga aaggaaccgg tctttgacct gcgtgggcga tactgggatc
     1561 gaaccagtga cctcttcggt gtgaacgaag cgctctcccg ctgagccaat cgcccgctgc
     1621 ccccacagac tagcgcatcg cggcgagtgc cgtgagcacc gtcacgagct aacttggcgg
     1681 cccgcgcatt cagcagagag gataacaggt tgcagccgag tggcaacgtt ccgacacaag
     1741 aagaaatctt gccggaccta ctgacaggta gcttgacttt cggctactct cagcaatgca
     1801 atcgatagca cctatcagcg gttctatcgc cctatgtcac cgcgtgctta cggtgcgcga
     1861 tccccgacaa caagggggaa gcgatgtagg tcacaatcag tgcaatcgat acgcaggaac
     1921 aatagactgc ggccaagtgg ttggacagta tcggtgtcct gaagcaacgg ataccgtcga
     1981 caactccccc cagtggccgc acagccgacg aaagtgcaac ggaagcaacc gggcatccgc
     2041 ctatctaacg ctctgtatcc gcatgactcg tccgctggtc gcttcacaac tcagagcccg
     2101 gcatcaaccg ggacccaccc cagattgagg ttggactgac gatgaacagc agcagcacgg
     2161 tatcggcgga gctcggcctt cggctggtcg ttccccagca gacgatcgtg ccactcgtgg
     2221 cgagccttta ctactccaaa gaagaccctt acgcgatccg catcgcgttc cacgtcgggc
     2281 tcgacgagcc ggtggagtgg atcttcgcca gggaactgct gtccagcggc atcgagggcc
     2341 gcgagggcca cggcgacgtc gtggtctggc cgtcggccgg atccgcggac gggaccggcg
     2401 gcaaggtgct gaacatcgag ctgtcctctc cgttcggcca ggcccacttc gaggcgccga
     2461 gcaaggagat ctccgacttc ctcaagcgca cctacgcgat cgtcccggcc ggcgaggaga
     2521 ccgacttcgt cgacgtcgaa accgaactga ccgaactgct ccgcaaggcg cagtgaacgc
     2581 gcgctaagcg ccccgcaatc ttcccggccc gggcccccgt aacgggccgg gattggcctc
     2641 gcaagccctc ggcatcgtcg ccgcgcgatc ggagcaccct ccgcccgata tgcttccgcc
     2701 gacgccgggg gctctcgtca cattcagccc ttattcgggt acgcaccgcg accgcgctcg
     2761 cacaccggcg cccgtccgcg ccggggaccg ctgatgatca tcccgaacga gtggctggtt
     2821 cccgccttcc cccgcctgac gtgcgataac cgcgcgacca gagtgaccag aagtcgttcg
     2881 ggagacagat tttttcgcgc aacccccgct ttgagttggt ggttgcgtga ggatcggata
     2941 aagttctgac gcaacgccgg agagatccgg cggacaggcc cgaggtgtac tcggaccaac
     3001 atgcggacgt ggctcagctg gtagagcatc accttgccaa ggtgagggtc gcgggttcga
     3061 atcccgtcgt ccgctcggta gcgcggctta gggtggattc tgacccccgc gaggcggtgc
     3121 gtaggccgtc ggtgaagct
//
LOCUS       DASRPQ010001398         1340 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_471471, whole genome shotgun sequence.
ACCESSION   DASRPQ010001398 DASRPQ010000000
VERSION     DASRPQ010001398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1340
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_471471"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..773
                     /locus_tag="VFD73_15995"
     CDS             <1..773
                     /locus_tag="VFD73_15995"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HZI75487.1"
                     /translation="ALNAATGARVWIGGDGAAVVVGTSYVVTENTDAAGYDLSVLKLQ
                     DGTRVWSMSSCLPSGSPIPVVVGLTVMVYGCDSQSRGVLQGRSLATGAVRWTRFGFGI
                     QSGDLAGPAGKNFYATGPSRTVEDLNPMTGQKKYVLSGAAKVLAVDASRVYASCAGRK
                     VCAYDISTGVLDWTYTPLINRVTMAAEAGGVLYLNDGIALNAATGHGIKKIWESITYA
                     SPTTVHVGLPSGPITVGDGRLAVVTDPRVLDLFGLPGY"
     gene            785..1282
                     /locus_tag="VFD73_16000"
     CDS             785..1282
                     /locus_tag="VFD73_16000"
                     /inference="COORDINATES: protein motif:HMM:NF039236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75488.1"
                     /translation="MYGSVNLGQDQVVVESQRPEQVPFDLAAELHLKFDTMAVAYRKA
                     MRALGLATSDPAGSGGSAARTATRCACRLLDACQHARYPSASRAKRYELDVNTSPGTS
                     PHHAGTPLPAHESHCYARLARIQAGGSLSRPLMTRSTGVRPVVRPSTQIAHFCVASTI
                     ILNDR"
BASE COUNT          252 a          437 c          417 g          234 t
ORIGIN      
        1 ttgccctcaa tgccgccaca ggagcacggg tctggatagg aggcgatggc gcagcggtcg
       61 tggtcggtac atcctatgtc gtaaccgaga acaccgatgc ggcaggatac gatctttccg
      121 tccttaagct ccaagacgga acacgcgtct ggtccatgtc cagctgccta cccagtggtt
      181 ctccgatacc tgttgtcgtt ggcctgacgg tgatggttta cggctgtgat agccagagcc
      241 ggggggtcct gcagggcagg agcctggcga caggggcagt gcgatggacc cggttcggat
      301 tcggcatcca aagtggtgac cttgccggtc cggctggcaa gaacttctac gcgactggcc
      361 cgtcccgcac cgtggaagac ctcaacccca tgaccgggca gaagaaatac gtgctgagcg
      421 gcgctgccaa agtcctggcc gtggatgcct cacgggtgta cgccagctgc gccggccgga
      481 aggtatgtgc ctacgacatc agcacaggtg tcctggactg gacgtacacg ccgctcatca
      541 accgggtaac catggccgct gaagcgggcg gtgtgctgta cctcaatgat ggcattgccc
      601 tgaatgcggc aaccggccac ggcatcaaga agatatggga atcgatcacc tacgcctcgc
      661 cgaccacggt ccacgtaggc ctgccgtccg gcccgatcac ggtgggcgat ggccggctag
      721 ccgtcgttac tgacccccgc gtgctcgacc tcttcggact gccaggctac tgacacaagg
      781 gcatatctac gggagcgtca acctcggcca ggaccaggta gtcgtcgagt cgcagcggcc
      841 cgagcaggtg cctttcgacc tcgcggccga gctgcacctg aagttcgaca cgatggcggt
      901 cgcctaccgc aaggcgatgc gggcgctcgg gctggccacc agcgacccgg cggggagcgg
      961 tgggagcgcc gcgagaaccg ccacgcgttg tgcatgccgc ctcctcgatg cctgccaaca
     1021 tgcccgatat ccgtcagcgt cccgcgcgaa acgatacgaa ctcgatgtga atacctcccc
     1081 aggcacatca ccgcaccatg ccggaacgcc cttgcctgcc catgaatcgc actgctatgc
     1141 ccgcctcgcg cggatccagg ccgggggcag tctgtcgcgg ccgctcatga ccagatctac
     1201 cggcgtccgc ccggtggtca gacccagcac gcagattgcc catttctgcg tggcctccac
     1261 gatcatcctg aacgaccgct gaccgaccag aacggcggtt aagttgagaa atcttggctg
     1321 tcagatctct ggccagggct
//
LOCUS       DASRPQ010001399         1230 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1427043, whole genome shotgun sequence.
ACCESSION   DASRPQ010001399 DASRPQ010000000
VERSION     DASRPQ010001399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1427043"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..>1230)
                     /locus_tag="VFD73_16005"
     CDS             complement(26..>1230)
                     /locus_tag="VFD73_16005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75489.1"
                     /translation="QYQLSAVSCPTSSVCVAIGLADSSYATSDGGRNWTAGGGIPEAE
                     WVAGVACPSASDCWAVGFKGTGIGLVVATANRASTWTAEPVPGGPSMLTGLSCPTISD
                     CWVTGESPDFTVPGTVLFTTDEGAKWSDKSLPPSFIGPAAVSCPTVSDCWAVGSANGP
                     GAVAVTHDGGAAWASETLPPGSGQMFSVSCPTTSECVAAGSFQSGHAEIVVTSNGGAT
                     WNSEPLPKGITQTTSVGCPTAPHCWAVGGNTIIMSTDGGHSWAKQAVESGSTTFEGVD
                     CPTNSACFAVGEKTSSSNPPLRSALVDATSNGGVSWTALSLPSGISNLASLSCATQSY
                     CQAVGTARSGAPTALSTLTGGATWHAEQLPVGLKTISGIACPAAKQCWATGSTSGDID
                     ILSTFIAP"
BASE COUNT          211 a          386 c          415 g          218 t
ORIGIN      
        1 tcccgtgtcg ctccgtccct tcggatcagg gcgcgatgaa ggtgctgaga atatctatgt
       61 cgccggatgt actcccggtg gcccagcatt gtttggcggc cgggcacgcg attcccgaga
      121 tggtcttaag gccgacgggt agctgctcgg cgtgccaggt ggcgcccccg gtcaaggtgg
      181 agagggcggt gggtgctccg gaccgggcag tgcctaccgc ctgacagtag gactgcgtgg
      241 cacacgacag gctggccagg ttactgatac cactggggag gcttagggct gtccagctaa
      301 ccccaccgtt gctcgtggca tcgacgagtg ccgagcgcaa cggggggttg ctgctgctgg
      361 tcttttctcc gacagcaaag caagccgagt tcgtcgggca gtcaacgcct tcgaacgtgg
      421 tggagccgga ttcgacggcc tgcttcgccc agctgtgtcc gccatctgtg ctcatgatga
      481 tggtgtttcc gccgacggcc cagcagtgcg gcgccgtcgg gcagcccacg gaggtcgttt
      541 gggtaatgcc cttgggcaga ggttccgagt tccaggtggc accgccgttg gaggtcacca
      601 caatctcggc gtgtcccgac tggaagctgc cagcggcgac gcattcgctc gtcgttggac
      661 atgacaccga gaacatctgg ccggagccgg gcggaagcgt ttcgctggcc caggccgcac
      721 ccccgtcatg cgttaccgca acagcgccag gtccgtttgc cgacccgact gcccagcagt
      781 cagaaaccgt cgggcatgac accgcggctg gtccgatgaa gctaggtggc agggatttat
      841 cggaccattt ggcaccctcg tcagtggtga acaggacggt gccaggaacg gtgaagtcag
      901 ggctttcgcc ggtcacccag cagtcggaga tggtggggca ggacagtccg gtcagcatcg
      961 aaggcccgcc gggaaccggc tcagccgtcc aggtagaggc ccggttggcc gtcgccacga
     1021 ccagtccgat accggtgccc ttgaagccca ccgcccagca atccgatgcg gaggggcagg
     1081 ccaccccggc gacccattcc gcttctggta tgccacctcc ggcagtccag ttgcgaccgc
     1141 catccgaggt ggcgtagctg ctgtcggcca ggccgattgc cacacagaca ctactggtcg
     1201 gacacgacac cgcggaaagc tggtactgag
//
LOCUS       DASRPQ010001400         1072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2977104, whole genome shotgun sequence.
ACCESSION   DASRPQ010001400 DASRPQ010000000
VERSION     DASRPQ010001400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2977104"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            56..469
                     /gene="pth2"
                     /locus_tag="VFD73_16010"
     CDS             56..469
                     /gene="pth2"
                     /locus_tag="VFD73_16010"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: protein motif:HMM:TIGR00283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HZI75490.1"
                     /translation="MEHEEQQRPTKQVIVIRRDLKMRRGKEIAQGAHASMAWLRQRIM
                     PHLTPAGRADQVQFSAAERSWLELSMRKVTVKVGSEQELLGVYDKAIAAGLVVHMITD
                     RGLTEFGGIPTRTCLAVGPDYDDLIDPVTGDLELY"
     gene            477..564
                     /locus_tag="VFD73_16015"
     tRNA            477..564
                     /locus_tag="VFD73_16015"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:510..512,aa:Ser,seq:gct)
     gene            573..663
                     /locus_tag="VFD73_16020"
     tRNA            573..663
                     /locus_tag="VFD73_16020"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:609..611,aa:Ser,seq:gga)
     gene            763..838
                     /locus_tag="VFD73_16025"
     tRNA            763..838
                     /locus_tag="VFD73_16025"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:796..798,aa:Met,seq:cat)
     gene            911..988
                     /locus_tag="VFD73_16030"
     tRNA            911..988
                     /locus_tag="VFD73_16030"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:943..945,aa:Lys,seq:ttt)
BASE COUNT          194 a          341 c          358 g          179 t
ORIGIN      
        1 gagagcacca cctcgccatg gtgggggtcg cgggttcgaa tcccgctaac cgctcgtgga
       61 acacgaagaa cagcagcgtc cgaccaagca ggtcatcgtc atccggcgcg acctgaagat
      121 gcgccgcggc aaggagatcg cgcagggcgc gcacgcctcg atggcgtggc tcaggcagcg
      181 gatcatgccg catctcacgc cggcgggccg tgcggaccag gttcaattct cagcggccga
      241 acggagttgg ctagagctca gcatgcggaa agtcaccgtc aaggtgggtt cggagcagga
      301 attgctcggt gtgtacgaca aggcgatcgc ggctggcctg gtcgtccaca tgatcaccga
      361 ccggggcctg accgagttcg gcgggatccc cacccggacc tgcctggccg tcggcccgga
      421 ttacgacgac ctcatcgacc cggtgaccgg cgacctcgag ctctactgat gtacctggag
      481 cgttggctca gcggctacag cagcgccccg ctaaggcgca ggggtccggg agggccctcg
      541 cgggttcgaa tcccgcacgc tcctcgagtt ccgtgggaga tgacatcacc aggtggtggt
      601 ccccgcctgg aaagcgggtg ggggcgcgag ccctgagatt cgagttctcc gtctcccgct
      661 ccatggagag tgaacctgcc agggtgcagg caccgccccg aaagcggccg ggcgtcttaa
      721 ggcgctggcg ttcgagtcgc ccgccaccct ctactactac atggcgagat agctcagctg
      781 gcagagcgcc tggcccataa ccaggaggtc gaggggtcgg gaccctctct cgctaccagg
      841 aatcacccgc tcggacagaa gaggaaaatg gtccggtgat gagtaaacag gttccgtgcc
      901 gactggtcac gggccattag ctcagtggta gagcggcggg cttttaaccc gcgtttcgtc
      961 cagggttcga ttccctgatg gcctaccatg cgtcgctggc gcaatggaca gcgcacccgg
     1021 cttctatccg gatggttccc ggttcgaatc ccgcgcggac cacgccggtg ca
//
LOCUS       DASRPQ010001401         1424 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2698659, whole genome shotgun sequence.
ACCESSION   DASRPQ010001401 DASRPQ010000000
VERSION     DASRPQ010001401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1424
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2698659"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            866..>1424
                     /locus_tag="VFD73_16035"
     CDS             866..>1424
                     /locus_tag="VFD73_16035"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HZI75491.1"
                     /translation="MSPESGLLTESYWPAEEGEAVRDATLGELLREAATVVPDRLALV
                     DGVEDPSARQEWTYAEFLQDAERTARALLKRFQPGDRVAIWAPNSAHWIILQQGISLA
                     GMILVAANPAYRSRELEHILSNSGAAGLFYVDSYRGLDLAAVVDELSPRLPALTDVVR
                     FSDWHQFLESGDPDQQLPTVSPLDPI"
BASE COUNT          257 a          447 c          461 g          259 t
ORIGIN      
        1 caggatgagc ctgcttccag gcgagtgcgt aggcgtctgg atcggcggct acctcggcca
       61 tccgggccag gggcgaaacg gttggcatca ccggcatgtt cctcactagt ttggtcttac
      121 cattataaac gctggcaaac tgggacgcaa ggttgccggg tcgtccgccg gcgtgaccgg
      181 cggagcttca caagctactg agactgccca tggggttcgc cagcggagat ctgccgggca
      241 caacttcggc tacgtcgtcg cgctggctga tcctgacgtc gagcaggtcg gggacggccc
      301 cactggagtc ggcaagcatt gccgccgtcg ctgcagcgag ccccggcagg ccgccgggtg
      361 agtacctcag gcgctgtatg gcgagggcat agtccgccgg cgatcgtcgc gcaccgaacc
      421 ctacgcaagt ccgccgtggc gccgaggtgc actgcgtggc cctgtgctgt cagcgtagat
      481 gtgcccgccc ggatcgggag cagaggtcga ccgagatctc ggtggtcact acgccgagcg
      541 agccgaacaa cggcggtccg cttcgccagt gttcgggctc ctgtacgcat gctgctgacg
      601 gccagaaccg agtcgcaact gacgtcgtcg actcgaaaca tggcttcccg cacgcccggg
      661 gcgtgattga tacctgactg ctgggccgag gattcgaacg tccacgtcat ggttcatcac
      721 cttcaagtca agaagaaatc tttggtctga caagttcaag aaaggatctt tggtctgacc
      781 attgtgcata tagtagcgaa aagcttagac tccggagagc gcgtatcccg ggaaacgaac
      841 gccagcggag gtgtcgggag tgaatgtgag cccagagtcc ggcctgttga ccgagtcgta
      901 ctggccagcc gaagagggcg aagctgttcg tgacgccact ttgggggaac tactgcgcga
      961 ggcggcgacg gtagtgccag accggctggc actcgtcgac ggcgtggagg acccgtcggc
     1021 acggcaagaa tggacctacg ccgagttcct gcaggatgcc gagcgtactg cgcgggccct
     1081 gctcaagcgc ttccagcccg gcgatcgcgt ggcgatctgg gccccgaaca gcgcgcactg
     1141 gatcatcctt cagcagggca tcagcctggc cggaatgatc ctggtggcgg ccaatcccgc
     1201 gtaccgcagc cgtgagctcg aacacatcct cagcaactcc ggtgccgccg gcctgttcta
     1261 tgtcgactcc taccgaggcc tggacctggc ggccgtcgtt gacgagctca gcccacggct
     1321 acctgccctg actgacgtcg tgcgtttctc tgactggcat cagttcctgg agtccggcga
     1381 tcccgaccag cagctgccga cggtttcacc ccttgatccc atcc
//
LOCUS       DASRPQ010001402         4869 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1096256, whole genome shotgun sequence.
ACCESSION   DASRPQ010001402 DASRPQ010000000
VERSION     DASRPQ010001402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4869
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1096256"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..639)
                     /locus_tag="VFD73_16040"
     CDS             complement(<1..639)
                     /locus_tag="VFD73_16040"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI75492.1"
                     /translation="MGDLLPSRVTLSTPDVNRLAYRRDSIWNIISPVSGGSTRYRASS
                     LTSSHPARVSAWAPLQQPIFRLLWFAALASNIGTWMQTVGAQWLLVGLPGAATLVALV
                     QTADTLPDVLLAFPAGTLADAFDRRRLLILVQLFQVVVGTTLTAFTLTGHINPPLLLG
                     FTFLLGAGGAMAVSPYQALIPELVPRNQLAAASALGAISVNLARAIGPAIAGL"
     gene            638..817
                     /locus_tag="VFD73_16045"
     CDS             638..817
                     /locus_tag="VFD73_16045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75493.1"
                     /translation="MDYPSGWTCERTARQFESYLLSTLALLDSLAVAEHLEACDECAQ
                     TILIYRFSLTRPPRG"
     gene            810..1403
                     /locus_tag="VFD73_16050"
     CDS             810..1403
                     /locus_tag="VFD73_16050"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HZI75494.1"
                     /translation="MAERIAAIAGSLRKGSYNRALVRAAQELAPEGMRIDLVEIGELP
                     FYNADVEVKGDPPAVASFKQKLARADGILIATPEYNDGIPGVLGNALDWASRLPGRSP
                     LQGKPVAVMGASPSQVGTARAQMHLRQILRHTQARTLPPPEMLVTRAHERFDKDLRLT
                     DEATRKVLRDLLLRFSRWIVRERRAQEAEREHASMEP"
     gene            1403..1819
                     /locus_tag="VFD73_16055"
     CDS             1403..1819
                     /locus_tag="VFD73_16055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75495.1"
                     /translation="MPIEKAPYYLLFAAVLLFAATLLLIQPYSVTSPWHVYDAPARVF
                     LGAAARADSLGLARQTSAPEAVRWGLAAAQLQHDSLAIWSRQAKAWAGNRQGDTTDVF
                     LSTQVSPCNLVLRFVGPAQHAKVQQASSTCLGPHQP"
     gene            1885..2370
                     /locus_tag="VFD73_16060"
     CDS             1885..2370
                     /locus_tag="VFD73_16060"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZI75496.1"
                     /translation="MASQAVSPSRTPSVLVIPPEGGQSITAFGSTAIFKLTGDDTGGA
                     LCLAVAETPPGAGPPPHVHARDDELFFVLQGELSFLAGREWVPAPQGSVIFAPRGVPH
                     TFRNAGASPSRHLVIALPSGFDKFYERCGEVFAQGEPVDRERLAAIAAEYGYRFLVPG
                     S"
     gene            2367..2822
                     /locus_tag="VFD73_16065"
     CDS             2367..2822
                     /locus_tag="VFD73_16065"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HZI75497.1"
                     /translation="MSISDEPLVVRRFIPVARDRVFAAWLDPGSLAQWMRPGGTTDAT
                     AEVDPRKGGKFRIVMMHGAQRFEHTGEYLLIEPPARLSFTWISQATDHKPSVVTIDFL
                     ERSGGTELVLTHQRLPLSQLDSHRNGWTDIARKLEDTLLGSASALEQRP"
     gene            complement(2799..3545)
                     /locus_tag="VFD73_16070"
     CDS             complement(2799..3545)
                     /locus_tag="VFD73_16070"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HZI75498.1"
                     /translation="MMKVVLVDDEPPGRLALRQQLSRLPDAEIVAECSDGASAIDAIV
                     QHAPDVLFLDVQLGGVSGLDVLERVGADAVPAIVFVTAYDRYAVRAFEAHAVDYLLKP
                     IDPDRFREAWCRAAERVERDRDDPDTRVTALVAGHSPQPLQRFVVRGGGKLVFVPVET
                     VEWIEAAGNYVRLHQGGKEHLVRRTLSGLAERLGSRFVRIHRTALVNARAIGALEPYG
                     KGSYVVHLRDGTRLVSSRYAGRSLRALLES"
     gene            complement(3542..>4869)
                     /locus_tag="VFD73_16075"
     CDS             complement(3542..>4869)
                     /locus_tag="VFD73_16075"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HZI75499.1"
                     /translation="PCMAGVNSVQSSAQSRATLSMPFMGASSVGGIQAGANRSDGQRS
                     RAEADSTRDQRGPCCDEWERLSRAVAHRSPEREDVLMDLPRSPRFRVVVTWLAVAVFF
                     SSENILVGAARHRPFDWQWDLYHEFVYALTWAAYSLLVLAAGRRWRPGAGSFRRTIAP
                     HLLLMLALAPAQIVTTYTLHYLGLTLLGHQPSATLWEFLRGISGGIVWGVLTGCLYYW
                     LILGIQAAFLYQRMYQQQRLTSAELESRLTEARLEALRLQLHPHFLFNTLNAISAYVG
                     ADPERAQRMIAWLGELLRRTLNGGAAAELPLSQELELLAPYLEIQRIRFGDRLTIEVI
                     MPDGAGDALIPALMLQPLVENAVEHGVSRTLNGARVQLKAEPIGDRLRLEIADNGPGP
                     AGGTEGVGLANTRSRLTGLYGDAHRFELRAVDTGGTVVTIELPFRRGPR"
BASE COUNT          889 a         1592 c         1550 g          838 t
ORIGIN      
        1 aagcccagcg atcgcgggcc cgatcgcgcg agcgagattg acgctgatcg cccccaaggc
       61 cgaagccgcc gcgagctgat tgcggggcac cagctctggg atgagcgcct gatacggcga
      121 caccgccatc gcgcccccgg cacccaggag aaaagtgaag cccaagagca gtggcgggtt
      181 gatgtggccg gtcagggtaa atgcagtcag ggtggtaccc acgaccacct gaaacagctg
      241 caccagaatg agcaggcgcc ggcggtcgaa cgcgtcggcc agcgtgccgg cgggaaaggc
      301 aagaaggacg tcggggagcg tatccgcagt ctggaccaat gccaccaacg tggccgctcc
      361 cggcagtcct accaggagcc actgtgcccc caccgtctgc atccaggtcc caatgttgct
      421 cgcaagcgcc gcgaaccaga gcagtcgaaa gatcggctgc tggagcggag cccaggcaga
      481 aactctggcg gggtgagatg aggtcagaga gctcgctcgg tacctggtgg aaccaccgga
      541 gacgggagag ataatattcc atatcgaatc ccggcggtac gccagccggt tgacgtccgg
      601 cgtcgaaagc gtaactctgg agggaaggag atctccgatg gactatccct cgggctggac
      661 ttgcgaacgc accgctcgac agttcgagtc gtacctgctg agcaccctgg ccctcctgga
      721 ttccctcgcg gtggccgagc acctggaggc gtgcgacgaa tgcgctcaga ccatcttgat
      781 ctatcggttt agcctgaccc gacctccccg tggctgagcg gatcgccgct attgccggca
      841 gtctccggaa gggttcttac aatcgcgcgc tggttcgggc ggctcaggag ctggcaccag
      901 agggcatgcg catcgacctg gtcgagatcg gtgagctccc cttctacaac gcagatgtgg
      961 aggtcaaggg tgatccacca gcggtggcct cattcaagca gaaactcgcg cgagccgacg
     1021 ggatcctcat cgccactccg gaatacaacg atggcattcc cggggtgctg gggaacgcac
     1081 tggattgggc atcacgtctc ccggggcgct ctcctctaca gggcaaaccg gtcgccgtga
     1141 tgggagcgtc acccagtcag gtcggaaccg ccagggcgca gatgcacctg cgccagatct
     1201 tgcggcacac tcaggctcgg acccttccgc ctccggagat gctggtgacc agggcgcacg
     1261 agcgattcga taaagatctc cggctcacgg acgaagccac tcgtaaggtg ctccgcgatc
     1321 tgttgctgag gttcagccgc tggatcgtgc gggagcgacg cgcacaggag gcagagcggg
     1381 agcacgcgag catggagccc tgatgcccat cgagaaggca ccctactatc tgttatttgc
     1441 ggcagtgctc ctctttgctg cgacgctgtt actgattcag ccgtacagcg tcacctcgcc
     1501 gtggcacgtc tacgacgcgc cggcacgggt ctttctcggc gccgcggccc gtgctgattc
     1561 ccttggtttg gcgcggcaga cctctgcccc cgaagcggtc cgctgggggc tggcggccgc
     1621 tcagcttcag cacgactcgc tggcgatctg gtcccgtcaa gccaaggcgt gggcaggcaa
     1681 ccggcagggc gacaccaccg atgtgtttct aagcactcag gtatcaccgt gcaatctggt
     1741 cctcagattc gtcggtcctg cgcagcacgc gaaggtccag caggccagct ccacctgtct
     1801 ggggccgcac cagccttaac cctattgtgt ctcccaccca tcaacttatc gtctctaccc
     1861 gagctgcatt gcagaaagac cgatatggca tcacaagccg tctccccatc tcgcaccccg
     1921 tccgtcctgg tgattcctcc tgagggaggt cagtcgatca ccgcgttcgg cagcaccgcg
     1981 atcttcaaac tcaccggcga cgatactggg ggcgccctct gcctggctgt cgccgagacc
     2041 ccgcctggcg ccgggccacc gcctcatgtt catgcgcgtg acgacgagct gttcttcgtg
     2101 ctccagggcg agttgagttt tttggctggc cgcgagtggg tgcccgcacc ccagggatcg
     2161 gtaatatttg cgccgcgagg ggtgccgcac accttccgca atgcaggcgc ctcgccgagc
     2221 cgtcatctgg tgatcgcgtt gcccagcgga ttcgacaagt tctatgaacg gtgtggcgaa
     2281 gtctttgccc agggagagcc ggtcgaccga gagcggttgg cggcgattgc agcggagtac
     2341 ggctatcgat ttctggtgcc gggctcgtga gcatttcgga tgagccgctg gtcgttcgcc
     2401 gcttcatccc ggtcgccaga gaccgggtgt ttgcggcctg gctcgatccg gggagtctgg
     2461 ctcagtggat gcgccccggg gggaccaccg acgcaacggc ggaggtcgac ccgcgaaagg
     2521 gcggcaagtt ccgcatcgtg atgatgcacg gtgcccagcg gttcgagcac accggcgagt
     2581 atctcctgat cgagccaccg gcccgactct cctttacctg gatctcacaa gcgaccgacc
     2641 acaagccgag cgtggttacc atcgacttcc tcgagcggag tggaggtacc gagctggtac
     2701 tgacgcacca aagactgccg ctctctcagc tcgactcaca ccgtaatgga tggaccgaca
     2761 ttgcgcggaa gctggaggac accctgctcg gttcggcttc agctctcgag cagcgcccgt
     2821 agggagcgtc cggcataccg gctggagacg agccgagtgc cgtcgcgtag gtgtaccaca
     2881 tagctgccct tgccgtatgg ctccaaggca ccgatcgcgc gggcattgac cagagccgtc
     2941 cggtggatcc gcacgaaccg gctgccgaga cgctcggcca gtccgctgag tgttcgccgc
     3001 accaggtgct ctttcccacc ctggtgcagc cggacatagt ttcccgccgc ctcgatccac
     3061 tccacagttt cgaccggtac gaagacgagc tttccaccgc cccgtaccac gaagcgttgt
     3121 agtggctgag gcgaatgacc cgccaccagt gccgtaactc gcgtatcggg atcatcccga
     3181 tcgcgctcca ctcgctccgc cgctcggcac caggcctcgc gaaaccgatc ggggtcgatc
     3241 ggcttgagca gataatccac ggcatgcgcc tcgaaggcgc gaacggcgta gcggtcatac
     3301 gccgtgacga acacaatcgc cggcaccgcg tccgcgccca cccgttcgag gacgtccaag
     3361 ccgctcaccc cgccaagctg aacgtccagg aacagcacgt caggcgcatg ctggacaatt
     3421 gcatcgattg ccgatgcgcc gtcgctgcac tcggcgacga tttccgcgtc cggcagacgg
     3481 gaaagctgct gtcgcagcgc gagccggccc ggcggctcat cgtcgaccag cacgaccttc
     3541 atcatcgggg tcctctgcgg aagggcaact cgatcgttac cacggtgcca ccggtatcca
     3601 ccgccctgag ttcgaagcgg tgcgcgtctc cgtacaatcc ggtaagtcgg gaccgcgtgt
     3661 tggcgaggcc gaccccttcg gttccgccgg ccggacccgg cccattgtcg gcgatctcga
     3721 gccgcaggcg gtctccaatc ggttcggctt tgagctgcac ccgcgcgcca ttcagcgtcc
     3781 ggctgacgcc gtgctccacc gcgttttcga ccaatggttg gagcatgagc gcagggatca
     3841 gtgcgtcccc tgccccgtca ggcatgatga cctcgatggt gagccggtcg ccgaaacgga
     3901 tgcgttggat ctcgaggtag ggggcgagca actccagctc ctgcgatagt ggaagttccg
     3961 ccgccgcccc gccattgagc gtccggcgca acagttcgcc cagccacgcg atcatccgct
     4021 gagcgcgttc cgggtccgcc cccacgtagg cggagatggc attgagcgtg ttgaagagga
     4081 agtgcggatg cagttgcagc cggagtgctt cgagccgagc ctcggtgagg cggctttcca
     4141 gctcggctga cgtgaggcgt tgctgctggt acatccgctg gtacaggaat gccgcctgaa
     4201 ttcccagaat cagccagtag tacaagcatc cggtcagcac cccccatacg atcccgccgc
     4261 tgatgcctcg caaaaattcc cagagtgtcg ccgaaggctg gtgccccagc agcgtgagcc
     4321 ccaggtaatg cagggtgtag gtagtgacga tctgggccgg ggccaatgcc agcatgagca
     4381 gcaggtgggg cgcgatcgtc cgccggaatg agccggcgcc gggccgccag cggcgccccg
     4441 cggcgagcac caggagggag taggccgccc aggtgagcgc gtaaacaaac tcatggtaga
     4501 gatcccactg ccagtcgaag gggcggtggc gggccgcacc taccaggatg ttctccgaac
     4561 tgaagaacac ggcgacggcg agccaggtga ccaccacccg aaagcgggga gagcgcggca
     4621 ggtccatgag aacatcttcg cgctccggtg agcggtgtgc aacagcacga gagagccgct
     4681 cccattcgtc acagcagggt cctcgttggt cacgggtcga gtccgcttcg gcccgggagc
     4741 gttggccgtc gctccggttc gccccagctt ggattcctcc tacactcgag gctcccatga
     4801 aaggcatact caaggtcgcc ctactctgcg cactgctctg gaccgagttc acaccggcca
     4861 tgcagggac
//
LOCUS       DASRPQ010001403         2812 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_165389, whole genome shotgun sequence.
ACCESSION   DASRPQ010001403 DASRPQ010000000
VERSION     DASRPQ010001403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2812
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165389"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1185
                     /locus_tag="VFD73_16080"
     CDS             <1..1185
                     /locus_tag="VFD73_16080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HZI75500.1"
                     /translation="FAFNLPEIPGLGSTSGVEMNLQNRSGKDVRDFAQNVQAFQAAVN
                     QLPAVQAMTTTFRANVPQLYLDVDRATAKSRGVSLTDLFGTLQTFLSTLYINDFNLYG
                     RTYRVQAEAQPQFRQTPEDLARLYVRGRNDEMVPVSALVRTEYRSGPTQLLRFNGFQS
                     ALFTGTPKAGRSSGEVMKEIDQLVADQFEPLGAGVGYSGQSFQERAASGQAGLVFGLG
                     LVIVFLVLAAQYESWSIPFAVLFGVPFGALGALLGIWIRSLPSDIYFQVGLITVVGLA
                     AKNAILIVEFANEIRQRGVPIRDAAIEAARERFRPILMTSFAFILGVSPLVVASGAGA
                     ASRHSLGTGVFSGMLFATSIGIFFIPLFFSTIRGLAERGFARHPLGAREPLPRPASPE
                     TK"
     gene            1185..2660
                     /locus_tag="VFD73_16085"
     CDS             1185..2660
                     /locus_tag="VFD73_16085"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HZI75501.1"
                     /translation="MRGRARLLLLAGLLAGCAVGPSYHPEQAVRPETRVGTAGSSAPA
                     RQFFDSLAAARDSDSAAVAAQQPSRLLLPDSLGSLQWLDIFRDSTLLGLVHTAVKQNR
                     DLQTAVSRIQEFRADVGIAQAPLFPSVTANGSVSTNQVAIGSFPPTQFDAFRVTADVA
                     WELDFWGRIRRGLQAARADLASQEATQRAVLLSLVSDVATSYLSLLELDQERSLAERT
                     LASRQATLNLARRRFQQGLTSELDVRQFEAQVAVPAATLAQTERFRAEQEHQLSLLLG
                     QAPTAIARRGSLVGIVEALRVPDSLPATLLERRPDVQAAERAYAAATARIGVAQAARL
                     PTISITASYGSQSPRAGDLFGNNSEIYQALAGVSLPLFTGGRLINQTRAARARADQAR
                     LQYEQSVLIALREASDALAGVRTSRDQVVAQQTQAEALRRALQLAELRYRTGIASYIE
                     VLKAQRSLFDAELALSQAQLGQLSAAVQLYRALGGNWPTGR"
BASE COUNT          449 a          929 c          933 g          501 t
ORIGIN      
        1 ttcgccttca atctgccgga aattcccggc ctgggatcga cgtccggcgt ggaaatgaat
       61 ttgcaaaacc ggtcggggaa ggacgtgcgc gactttgccc agaacgtgca ggccttccag
      121 gctgccgtga atcagttgcc cgccgtccag gcgatgacca ccaccttccg ggccaatgtg
      181 ccgcagctct atctcgacgt cgatcgcgcg accgccaagt cccggggcgt cagcctgacc
      241 gatctgttcg gcacgctgca gaccttcttg tccacgctct atatcaacga tttcaatctc
      301 tatggccgca cctaccgggt gcaggccgaa gcccagcctc aattccggca aactccggaa
      361 gacctcgcgc ggctgtacgt gcgcggccgg aacgacgaga tggttccagt ctctgcgctg
      421 gtccggaccg agtaccggag cggcccaact cagctgctcc gcttcaatgg cttccaatct
      481 gccctcttta ccggcacgcc caaggccgga cggagctcgg gcgaagtgat gaaagagatc
      541 gatcagctgg tcgcggacca gttcgagccg ctgggcgcgg gtgtcggtta ttccgggcag
      601 tcgttccagg agcgcgccgc ctcgggccag gcaggcctcg tcttcggact gggtctcgtg
      661 atcgtcttcc tggtgctcgc ggcccagtac gagagctggt caattccgtt cgccgtgctc
      721 ttcggggtcc ccttcggagc gcttggcgcc ttgctgggca tctggatcag gagcctcccg
      781 agcgacatct acttccaggt cggactgatc accgtagtcg gactcgcggc caagaacgcg
      841 attctgatcg tggagtttgc caacgagatc cggcagcgcg gagtgccgat tcgggacgcc
      901 gcgatcgagg cggcgcgcga gcggttccgt cccattctca tgacctcgtt cgccttcatc
      961 ctcggcgtct cgccgctggt ggtggcgagt ggcgcgggag cggccagccg ccactccctc
     1021 ggcaccggcg tgttctccgg gatgctgttc gccaccagca tcggaatctt cttcattccg
     1081 ctcttcttca gcaccatccg cggtctggcc gagcgcggct tcgcccggca tcctctcgga
     1141 gcccgcgagc cgctgccccg gccggcgtcg ccggagacga agtgatgcgc ggtcgggccc
     1201 ggctgcttct cttggccggt ctgttagccg gctgtgccgt agggccgagc taccatccgg
     1261 agcaggcggt acgcccggag acccgggttg ggaccgccgg ctccagcgca ccagctcggc
     1321 agttcttcga ttcattggcg gccgcacggg acagcgacag cgcagcggtc gcggcacagc
     1381 aaccgtccag actgctgctg ccggactcac tcggcagtct tcagtggctc gacatctttc
     1441 gagattcgac gctgctcgga ttggtccaca ccgcagtcaa acagaaccgc gacctgcaga
     1501 ccgcggtcag ccggattcag gagttccggg ccgatgtcgg tattgcgcag gcgccgctgt
     1561 tcccgagcgt caccgccaat ggaagcgtga gcactaacca ggtggccatc ggatcgtttc
     1621 cgccgaccca attcgatgcc ttccgggtga ccgccgacgt tgcctgggag ctcgacttct
     1681 ggggacgaat ccgtcgtggg ctgcaggctg ctagggccga tctcgcttcg caggaggcca
     1741 cgcagcgcgc ggtgctcctg tcgctggtaa gcgacgtggc caccagctac ctgtcgctct
     1801 tggagctgga ccaggagcgc tcgctggcgg agcggacgtt ggcctcccgt caggcgacac
     1861 tcaatctggc gcggaggcgg ttccagcagg ggctgacctc ggagctggac gtgcgtcagt
     1921 tcgaggcgca ggtggcggtg ccggcggcga cgctggcaca aaccgagcgc tttcgggccg
     1981 agcaggagca tcagctgagt ctgttgctgg gccaggctcc gacggcgatc gcacggcggg
     2041 gaagtctggt ggggatcgtg gaagcactac gggtgcccga ttcgcttccc gcgacgctac
     2101 tggaacggcg gcccgacgtg caggcggcgg aacgcgccta tgccgcggcc actgcccgca
     2161 tcggggtagc gcaagcggct cggctgccca ccatctcgat cacggcttct tacggcagcc
     2221 agtcgcccag ggccggcgac ctcttcggca acaacagcga gatctatcag gcgctcgccg
     2281 gcgtttccct cccgcttttc accggcggtc ggctgattaa ccagactcgt gcggcgcggg
     2341 cccgggccga ccaggccaga ctgcagtacg agcagagcgt cctcatcgcg ctcagggaag
     2401 cgagcgatgc gctggcagga gtgcgaacgt cccgagatca ggtggtggcg cagcagaccc
     2461 aggccgaggc gctccgccga gcgctgcagc tggcggagct ccgctatcgc accggcattg
     2521 cgagctatat cgaggtgctc aaagcccagc ggagtctgtt cgacgccgag ctggcgctga
     2581 gccaggcgca gctgggccag ctctctgctg cggtccagct gtatcgcgcg ctggggggca
     2641 actggccgac gggacggtaa gcggagagtc ggagaggcgg agggtcggag aggcggaggg
     2701 tcggagaggt ggagaacgta gatgatttaa caagtcagcc ctccgaccct ccgtccccct
     2761 ccgaccctct gtctctccgc ccgtttaata cgctaccgca tacctcgaaa ag
//
LOCUS       DASRPQ010001404         2725 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_786919, whole genome shotgun sequence.
ACCESSION   DASRPQ010001404 DASRPQ010000000
VERSION     DASRPQ010001404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2725
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_786919"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..288
                     /locus_tag="VFD73_16090"
     CDS             <1..288
                     /locus_tag="VFD73_16090"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase-related protein"
                     /protein_id="HZI75502.1"
                     /translation="KVRARKDKMGFPVPIHVWARGPARDFFHDVLLSPTARTRGLLNH
                     RTISQLMRKESAFGRRLWGLLSLELWLREFVDGSRPRLLPSGRAAAATLSA"
     gene            311..2047
                     /locus_tag="VFD73_16095"
     CDS             311..2047
                     /locus_tag="VFD73_16095"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HZI75503.1"
                     /translation="MTQIPLSADGREWQVKKIVVIGPGIVGTPMAALLASAPIRGQDP
                     PEVVVVQRDSVTSGWKVGAINRGESPIGGVEPGLDRLIAEAVRNRSLRASHDYAEARD
                     ADVILVCVQTDKRGYAPDYGPLFEALTCLGPELQRRTPGHVPVIVFESTLAPSSMTTL
                     VSEQFASFGLEDGRDLLLGNSPNRVMPGRLVERVTTSDKLVGGLRRETVQKIQHLYSR
                     IVTGGTVHPTNSMTAEVVKTLENAYRDVRIAFSAEIARYCDDSDVDFYQVRDAINHRL
                     AQADSATRDATAVPTGGLLVPTVGVGGHCLPKDGILLWWRRLEAGLDHANSLILEARR
                     INDESPGVCIAQAERAFGSIAGRPVAILGTAYRFDSEDTRNSPSLALADALRAKGCPV
                     VLHDPYVRPGDQNLLRYGLGEHFTNELSLALKDAEIGFLCTGHGSYRTELVPAMRQAP
                     VLKNLFDACNFFQPGEPDGKHIRYAGIGRGRAAPVPQLLEFVEQEFHAMERGLSNELV
                     LLIDFLNEAYAADPFNRIDFAEVQRLAGTCVTGCQIVDPGPIPDTPGYNAFTTRLADL
                     ARAAASTRLQTC"
     gene            2057..>2725
                     /locus_tag="VFD73_16100"
     CDS             2057..>2725
                     /locus_tag="VFD73_16100"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 87 protein"
                     /protein_id="HZI75504.1"
                     /translation="MMVAGPDRSRINLGLSLVLFLLGLSLALARVGALDRVGSIRLSA
                     PYVMVDFRHVVYYPTHAFWDGINPYDSGRYMQRYPVEIPVSLYAPATFLLFAPFAALP
                     VGLSSAAYFVLTLFLTAVLANAALRLAGWPAGISPTLAVSGLLLVSRPGHWNLLSGQV
                     TIIVVLATYCALIYYRSAPRLAGIGLALALLKPSFGIPLIPLLLARRAVRATAWGVGL
                     AAALN"
BASE COUNT          468 a          860 c          848 g          549 t
ORIGIN      
        1 aaggttcggg cgcgaaagga caaaatgggc ttccccgtcc caatccatgt gtgggcccgc
       61 ggaccagcgc gtgatttttt ccatgacgtc ctcttgtctc cgaccgcccg gacccgcgga
      121 ctgctcaatc accgcaccat ctcccagctc atgcgcaagg agagcgcatt cggccggcgc
      181 ttgtggggac tgctgagtct ggagctttgg ctcagagagt tcgtcgatgg gtcgcggccc
      241 aggctgcttc ccagcgggcg cgcggccgcg gctacgctct cggcatagat cacccttatc
      301 aaagccaggt atgacgcaaa tcccgcttag cgccgacggg cgcgagtggc aggtcaagaa
      361 gatcgtcgtg atcgggccag gcatcgtggg taccccgatg gctgcgcttc ttgcgagcgc
      421 gcctattcgg gggcaggacc ctccggaagt tgtcgtggtg cagcgagatt cggtgacgtc
      481 gggctggaaa gtcggcgcga tcaaccgggg agagtccccc atcggcggtg tcgagcccgg
      541 actcgatcgc ctcatcgcgg aagcggtccg aaaccgctcg cttagagcga gtcacgatta
      601 tgccgaggcg cgcgacgctg acgttattct ggtctgcgtc cagaccgaca agcggggcta
      661 tgcgcccgat tacggcccgc tgttcgaggc attgacgtgt cttggaccgg agctgcagcg
      721 gcggaccccg gggcatgtgc ctgtcattgt gttcgagtcc acgctggcac catcctcgat
      781 gaccaccctt gtgagcgagc agttcgcctc ctttggtctg gaggatggtc gcgatctgct
      841 gctgggaaat agtcccaacc gggtcatgcc cggacgactg gtcgagcgcg tcaccacgtc
      901 ggacaagttg gttggtgggc tgcgtcggga gacggtgcag aagatccagc acctgtatag
      961 ccggatcgtg accggcggga cggttcatcc caccaacagc atgacagccg aggtggtaaa
     1021 gaccctggag aacgcatatc gcgacgtccg gatcgccttc tcggccgaaa ttgcgaggta
     1081 ctgtgacgac tctgacgtcg atttctacca ggtccgcgat gccatcaatc accggttggc
     1141 tcaggccgac agcgccaccc gagatgcgac ggctgtcccc actggcggcc tgctggttcc
     1201 gacagtgggc gttggggggc attgcctgcc gaaggacggc attctgctct ggtggcgcag
     1261 attggaagcc ggactggacc acgccaacag cctcatcctc gaggcccggc ggatcaacga
     1321 tgaatcaccg ggggtgtgca tcgcgcaggc cgaacgagct ttcggatcga ttgctggccg
     1381 gcccgtcgcc atcctgggta ccgcctatcg cttcgattcc gaggacaccc ggaactcacc
     1441 gtctctcgcg ctggcggatg cgctgcgggc gaagggctgc cctgtagtgc tccacgatcc
     1501 ctatgttcga ccgggagatc agaacctgct gcgttatggc ctgggggagc acttcaccaa
     1561 cgagctctcg ctggctctga aggatgcgga gatcgggttc ttgtgcaccg gtcacggcag
     1621 ctatcggacc gagctggtcc ctgccatgcg ccaggccccc gtactcaaaa atctgttcga
     1681 cgcgtgcaac ttctttcaac cgggcgagcc ggatgggaag cacatacggt acgcggggat
     1741 tggtcgaggg agagcagcgc cggttcccca actgctggaa ttcgtagaac aggagtttca
     1801 cgcgatggag cgcgggctca gcaacgagct cgtcctgctg atcgacttcc tcaatgaagc
     1861 atatgccgca gatccattca accggatcga cttcgccgag gttcagcgac tggccggcac
     1921 ctgcgtgact ggctgccaga ttgtggatcc cggaccgatt cctgatacgc cgggttacaa
     1981 cgcattcacc accaggcttg ccgacctggc gcgggccgcg gcaagcacaa ggctgcaaac
     2041 atgctgaggc ccgccaatga tggttgcggg acctgatcgg tcacgaatca acctcgggct
     2101 gagcctggtt ctctttctcc tgggcctgag tctcgccctg gccagagtcg gagccctgga
     2161 ccgggtcggt tcgatccgac tcagcgcccc gtatgtcatg gtcgactttc ggcacgtggt
     2221 gtactatccc acacatgcct tctgggatgg catcaatcca tatgacagcg gccgctacat
     2281 gcagcggtac cccgtcgaga taccggtcag tctctatgca ccggcgacgt ttctcctctt
     2341 tgccccgttc gccgctttac ccgtagggct ctccagcgct gcctattttg ttctaaccct
     2401 gttcctcaca gcggtgctgg cgaacgcggc gcttcggctc gccgggtggc ctgccggaat
     2461 ttccccgaca cttgccgtta gtgggctgct ccttgtaagc cggcccggcc actggaatct
     2521 tttatcgggc caggtcacca tcatcgtggt tctcgccacc tattgtgctc tgatctacta
     2581 tcgaagtgct ccacgactcg cggggatcgg cctggccctc gccctcctga agccctcgtt
     2641 cggtatccca ctgattccac tactgctcgc ccgcagagcg gtcagggcaa ccgcctgggg
     2701 tgtcggcctc gctgcggcgc tgaat
//
LOCUS       DASRPQ010001405         1073 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3926144, whole genome shotgun sequence.
ACCESSION   DASRPQ010001405 DASRPQ010000000
VERSION     DASRPQ010001405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3926144"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..210)
                     /locus_tag="VFD73_16105"
     CDS             complement(<1..210)
                     /locus_tag="VFD73_16105"
                     /inference="COORDINATES: protein motif:HMM:NF017051.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75505.1"
                     /translation="MPSALASDTLEIVSHDLQFHVVGVSHHTAGVEVREQFALTPAEA
                     DAWLEAERLAGRSAVLLSTCNRCEVY"
     gene            complement(444..896)
                     /locus_tag="VFD73_16110"
     CDS             complement(444..896)
                     /locus_tag="VFD73_16110"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HZI75506.1"
                     /translation="MYLTTTRRPLPFQSLRRLGNALDEAFNTWPFSQDEGGAITSSWY
                     PACDVLEDQDSVKIIVELPGLTPEDVKLSLENNLLSIRGEKKQHAEERTERVHRYERS
                     YGAFERSFALPTTVDSDKVSASFENGILTVTLPKAERARPREIPVRTG"
BASE COUNT          178 a          352 c          358 g          185 t
ORIGIN      
        1 gtacacctcg cagcggttgc aggtcgagag caggaccgcg cttcgaccgg ccaaccgctc
       61 ggcttcgagc caggcatcgg cctccgcggg cgtcagcgcg aactgctcgc ggacctcgac
      121 cccggcggta tgatggctta cgccaacgac atggaactgg agatcgtgac tcacgatttc
      181 aagggtatcg ctcgccagtg cggagggcaa tccgcgcgcc tgcggaggga tctccgtagg
      241 actacggacc taccggcttg ccgcgcccag cggagctcct cttccggatc tttgacgttg
      301 ctcgcgtacc cgacctccgg gttcgggaac ccatcggtac tctcgatgcg cggccgttgg
      361 tgagccgcct cactgggaca aaacagcaaa gagccctcag gtgaccccga gggctctcac
      421 cgcgcttacg cgactggtgc ggctcagccg gtccggaccg ggatctcccg cggacgggcc
      481 cgctcggcct tcggcagggt gacggtcaag atgccgttct caaagctggc cgacaccttg
      541 tccgaatcca cggtggtcgg cagggcgaag ctccgctcga aggcgccgta gctccgctcg
      601 tagcggtgca cccgctcggt ccgctcctcg gcatgctgct tcttctcgcc ccggatcgaa
      661 agcaggttgt tctccagcga cagcttgacg tcttcggggg tgaggcccgg cagctccacg
      721 atgatcttga ccgagtcctg gtcttccagc acgtcgcagg ccgggtacca ggaagaggtg
      781 atcgccccgc cttcatcctg cgagaaaggc caggtgttga aggcttcgtc cagcgcgttg
      841 cccaggcggc gcaggctctg gaaggggagc gggcgccggg tggtcgtgag atacatggat
      901 cgctccactc gacagggtct ggttgacacc gaccggcccg aagtggccgg ctggtaccga
      961 gcccctgaag cagaggccat gcctgagttt ggcccgtgaa tccggccaaa atgaccgatg
     1021 gtctctgccg ctggcaaacc aggtttacgg ggccgggcca ggagcaggcg gcg
//
LOCUS       DASRPQ010001406         1200 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3628026, whole genome shotgun sequence.
ACCESSION   DASRPQ010001406 DASRPQ010000000
VERSION     DASRPQ010001406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1200
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3628026"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1200
                     /locus_tag="VFD73_16115"
     CDS             <1..>1200
                     /locus_tag="VFD73_16115"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HZI75507.1"
                     /translation="SGEQWSGLGKIVFAVTDRVTFRLLGSHSEDQRLLFDPAYKYDLD
                     FAPGQRLKGDLLSGHLQYASGPNARHPLILDLRGGRFVREFVRGTVDGKVDYAFGGVT
                     GTRFHFIGEDLARDQDAAAEPISGLTVPQLSTVTPWGVPAFFLGSGSRGDLGWSHFGE
                     TRGQIDATVGAGEQVDLYFGGELVGQQVRTFQRVLGYLPVGQGDSVPPTAISRFSPTS
                     AAGYFEAQLRLADLAFTAGLRYDQFSAGTELASESRGARRKLSPRMAVSTVLKRATFV
                     ASYGRFAQAPDYQYLVDAAFDDTTRTGRFRQGNPNIGFEDATQYEFSLRVRPTPETSL
                     RIGTYIKRLDGLVASVPLGLDPDSTIFGNADAGSVKGVELIAERELHGGFGARLIYTL
                     QSATATA"
BASE COUNT          206 a          381 c          383 g          230 t
ORIGIN      
        1 cagcggtgag caatggagtg gcctgggcaa aatcgtcttt gccgttaccg accgggtgac
       61 cttccgactt cttggatcgc actccgaaga ccaacggctg ctcttcgatc ccgcgtacaa
      121 gtacgacctg gattttgcgc ccggtcagcg actgaagggt gacctgctga gtggtcacct
      181 gcagtatgcc agtggaccga acgcccgtca cccgctgatt ctggacctcc gtggcggccg
      241 attcgtacgg gagtttgtcc gggggaccgt cgatggcaag gtggactacg ctttcggagg
      301 ggtcaccgga acgcgcttcc acttcatcgg cgaagatctg gccagagatc aggacgcggc
      361 ggccgagcca atctccggcc tgacggtccc ccagctcagc acggtgacac catggggcgt
      421 gccggccttc ttcttgggta gtggctcgcg gggcgatctt ggctggagcc atttcggaga
      481 aacccgaggg cagatcgatg ccactgttgg tgcgggagag caggtcgatc tctactttgg
      541 cggcgagctc gtcgggcagc aggtccgcac cttccagcgc gtgctgggct atctgccggt
      601 tgggcagggt gacagtgtcc cgccgactgc gatctcccgg ttttccccga ccagcgctgc
      661 cggatacttc gaggcacagc tccgactcgc ggatcttgcc tttaccgctg gcctgcggta
      721 cgaccagttc agcgctggaa ccgagctggc atcagagtct cgcggcgcgc gtcgaaagct
      781 cagcccgcgg atggctgttt ccaccgtgct caagagggcc accttcgtgg ccagctatgg
      841 tcgctttgcc caggcccctg actaccagta cctggtcgac gctgccttcg acgacaccac
      901 ccgcaccggc cgcttccgcc agggaaatcc caatatcgga ttcgaggacg ccactcagta
      961 tgagttcagc ctccgggtgc ggccgacgcc agagacgtcc ctccgcatag gcacctatat
     1021 caaacgcctg gatgggctgg tggcctcggt accgctcgga ctggatccgg attcgaccat
     1081 cttcggcaac gctgacgcgg gcagcgtaaa gggggttgaa ctcattgccg agcgggaact
     1141 gcacggcggc ttcggtgccc ggctgatcta tacgctgcag agcgcaacgg caacggccag
//
LOCUS       DASRPQ010001407         2537 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2699284, whole genome shotgun sequence.
ACCESSION   DASRPQ010001407 DASRPQ010000000
VERSION     DASRPQ010001407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2537
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2699284"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..227
                     /locus_tag="VFD73_16120"
     CDS             <1..227
                     /locus_tag="VFD73_16120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75508.1"
                     /translation="QSPEENVPVWTMMRANELDRLVPASVLPELGRRIVGPLQQTEAI
                     DVRVCRYSRLRLVGVYVDLVTLLDQTSDLV"
     gene            complement(283..1836)
                     /locus_tag="VFD73_16125"
     CDS             complement(283..1836)
                     /locus_tag="VFD73_16125"
                     /inference="COORDINATES: protein motif:HMM:NF017669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HZI75509.1"
                     /translation="MTSTKTSTSAFDEMLAAGYGFNEPSLMLGAALEGGTVHQRPPIR
                     LPLATVNRHGLVAGATGTGKTKTLQLLTEQLSSQGIPVFVADMKGDLSGLAVPGEASD
                     AVRTRASAVGWDWKPYGVPVEFVSLTGDLGVQMRATVSSFGPQLLGKVLALNDTQTSV
                     LAMVFKYADDNQLPLLDFSDLRAVLQYLSSATGKPALDQYGGMSEASVGVLLRKMVEL
                     ESQGAEKFFGEPEFDVKDMLHATSDGRGVVTCLELSDVADRPKLFSTFMMWMLAELYH
                     NLPEVGDVPKPKLVFFFDEAHLLFEDAPKAFLEQVEQVVRLIRSKGVGVYFVTQTPQD
                     VPEPVLAQLGNRVQHALRAHTPDDDAALKATVRTFPKTTFYDLAETLTSLGIGEAVVT
                     VLNSRGSPTPVVATRLIPPASRMAPLTPQELQADIRQSDLLAQYGKPIDRESAREMLA
                     TRMANTAPAGAPPPQRPARSAGKTIAQVAAGALSSSIARTVGREVVRGIFGLLGAKPS
                     RSSTRRSRW"
     gene            complement(1833..>2537)
                     /locus_tag="VFD73_16130"
     CDS             complement(1833..>2537)
                     /locus_tag="VFD73_16130"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HZI75510.1"
                     /translation="DPRVRVLAVSLVQFSNGYKVDLARLSRETRARGIYLVVDAIQGL
                     GAVPVDVRSTPVDILACGAQKWLLSPWGSGFVYVRRDLIRGLRPAVTGWMAFEGTDDF
                     TRLTQYNDMLRGDARRFELITLPYQDFAGMNASLTLLLQLGIDNIQRHLRRLHQPVLD
                     WAAGAGVSIVSPVGDHASGMICVAPENVGPAFRALKAAGIVCSLREGAIRLSPHAYTT
                     TEEMERVVDILEGCSA"
BASE COUNT          491 a          798 c          783 g          465 t
ORIGIN      
        1 ttcagagtcc ggaggagaat gtgccggtct ggaccatgat gcgagcgaac gagcttgacc
       61 gcctggtgcc agcgtccgtg ctgccggagt tgggcaggcg gatagtaggt ccgctgcagc
      121 aaaccgaggc gatcgatgtc agggtgtgcc ggtactcccg gttgcgcctg gtcggcgtat
      181 atgtcgacct cgtgaccctg ctcgatcaga ccagtgatct ggtttaagaa cggcgtttcc
      241 cacatcaccg ggaagagccc ggtgagaacg gcaatccgca cgctaccagc ggctccggcg
      301 ggtgcttgac cgcgacggct ttgctccgag aaggccaaag attccgcgga cgacctctcg
      361 gccgacggtg cgggctatcg agctcgacaa cgctccggca gcgacttggg cgatggtttt
      421 tcccgcactt cgggccggcc gttgaggagg aggagcgccg gctggcgcgg tgttggccat
      481 tctggtcgcc agcatttcac gggcgctttc tcgatcgatt ggctttccgt attgagccag
      541 taaatcggac tgccgaatgt ccgcctgcag ctcttgcgga gtcagcgggg ccatcctcga
      601 cgccggagga atcaaacggg tggctaccac gggagtcggg gacccgcggc tgttcaacac
      661 ggtgacgacc gcctcaccga ttcccaggct cgtaagtgtc tcggcgagat cgtagaacgt
      721 ggtcttcgga aaggtgcgca ccgtggcttt gagtgccgca tcatcatccg gggtatgggc
      781 ccgaagggca tgctggaccc ggttacccag ctgggcaagc actggctccg gcacatcctg
      841 tggtgtctgg gtgacaaagt agacgcccac gcctttcgag cggatcagcc gaaccacttg
      901 ttccacctgc tcgagaaacg ccttcggcgc atcctcgaac aacagatggg cttcatcgaa
      961 aaagaagacc agcttgggct tgggcacgtc tcccacctcg gggagattgt ggtacagctc
     1021 ggccagcatc cacatcatga acgtggaaaa gagcttcggt cgatccgcca cgtcggacag
     1081 ctcgagacag gtaaccaccc cgcgtccgtc cgaggtcgcg tgcaacatgt ccttgacatc
     1141 gaattccggt tcgccgaaaa acttctccgc gccctggctc tcgagctcga ccatcttcct
     1201 gagcaaaacg cccaccgacg cctccgacat tccgccatac tgatccaggg ccggtttacc
     1261 agtggcggaa ctgagatact ggagcaccgc ccggagatcg gaaaaatcca ggagcggaag
     1321 ttggttgtcg tcggcgtact tgaacaccat tgcgagcaca ctggtctggg tgtcgttcag
     1381 cgcgagcacc ttgcccagga gctgcgggcc aaaggagctg accgttgccc gcatctgtac
     1441 gccgaggtca ccggtaaggc tcacgaactc caccggcaca ccataaggtt tccagtccca
     1501 gccgactgcc gaggcacggg tacgaacggc gtcgctcgcc tctcccggca ccgcgagccc
     1561 ggacaggtct cctttcatat ccgcgacaaa taccggaatg ccctggctcg agagctgctc
     1621 ggtgagaagc tgaagcgttt tggtctttcc ggtccccgta gccccggcca cgagaccgtg
     1681 ccggttgacg gtagccaggg gtagtcgaat cggaggacgt tggtgaacgg tgccgccttc
     1741 gagagcggcg cccagcatca aggacggctc gttgaagccg tatccggccg cgagcatctc
     1801 gtcgaacgcg ctggtggacg tcttggtcga ggtcatgctg aacacccttc cagtatgtcg
     1861 acgacccgct ccatctcctc ggtcgtcgtg taggcgtgtg gactgagccg gatcgcacct
     1921 tcccgaaggc tgcacacgat tccggcggct ttgagggcac ggaacgccgg accaacgttc
     1981 tccggagcta cgcaaatcat tccggaggcg tggtcaccaa ccggggaaac gatggagacc
     2041 cccgcgcctg ctgcccaatc gagcaccggc tggtgaagcc ggcgcaagtg gcgctgaatg
     2101 ttgtcgatcc caagctgaag cagcagtgtg agcgaggcgt tcatcccggc gaagtcctgg
     2161 tacggcagcg taatcagctc gaatcgccga gcatcccccc tgagcatatc gttgtattgc
     2221 gtcagccgag taaagtcgtc ggtcccttca aaggccatcc acccggtcac cgccggccgc
     2281 agcccccgaa tcagatctcg ccggacgtaa acgaagccgg agccccaagg cgagagcagc
     2341 catttctgtg cgccgcatgc caggatatcg actggagtgc tccggacgtc gactggaacg
     2401 gctccgagcc cctgaatggc atccaccacc aggtagatgc cccgggcccg agtttcccgg
     2461 gacagccggg ccagatccac cttgtatccg ttgctgaact gtaccagtga gaccgcgagc
     2521 acccttaccc tcggatc
//
LOCUS       DASRPQ010001408         1842 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_472133, whole genome shotgun sequence.
ACCESSION   DASRPQ010001408 DASRPQ010000000
VERSION     DASRPQ010001408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1842
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_472133"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1267
                     /locus_tag="VFD73_16135"
     CDS             <1..1267
                     /locus_tag="VFD73_16135"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HZI75511.1"
                     /translation="IMMPKVDGLQLLQRVKADPRFKDLPVLMISSMPPEEATVRSLGL
                     GAADFIPKPFRVRELLARVKAHLRVGRELNQARAEARSRSEMMDIMQEVTASLKPEEI
                     YGILVRRVAQALSIARCSIIMAGPDDQVGTVVAAFENPMLHNLQVDLNRYPEIRHALK
                     TGEVVLVRDVQTDPLYRGVRDDWESQGRPVETRSAVALRFSLRQQPVGVFFLRTTSED
                     PPLNEHDVQFAEEVTSAAVAALERAYDLENAVLGQEQMRHLAETDPLTNCFNRRALME
                     KLEQEMDRAARYATMLTGMMVDIDNFKQINDTYGHLVGDRVLKQLANLLKREQRSVDI
                     VARYGGEEFVVLLPETTSAESRNFAERILRRVATHDFGEAGRPVRVTISIGIASYPDE
                     RVSDGESLLRLADTHLYRAKSDGRNRFRD"
     gene            1264..>1842
                     /locus_tag="VFD73_16140"
     CDS             1264..>1842
                     /locus_tag="VFD73_16140"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HZI75512.1"
                     /translation="MSNRRCPRCQTSYAAPARFCVKDGSLLVESDASPPAPPPGGAAR
                     ISARDSAEAGSGAGSAREAPPQLASLTGQVLDQRYHITRKLGEGGMSYVYQAQEVDTG
                     RAVAVKILIPRLSRDPASVERLRREATIATRLNHPNVCPILRLGETPDRLIYLVMPFL
                     EGEALSEHETRRGPFPVAEGIPLLVQMCHGLGH"
BASE COUNT          342 a          593 c          598 g          309 t
ORIGIN      
        1 catcatgatg ccgaaggtgg acgggctcca gctgctccag cgggtgaagg ccgaccctcg
       61 gttcaaagat cttcccgtgc tcatgatctc ctccatgccc ccggaggagg ccacggttcg
      121 ctcgttaggg ctcggggcgg cggacttcat ccctaagccg ttccgagtac gcgagctcct
      181 cgcacgggtg aaggcccacc tccgagtcgg acgcgagctc aaccaggcca gggccgaggc
      241 gcgctcccgc tccgaaatga tggacatcat gcaggaggtg accgcttcac tgaagccgga
      301 agagatctac ggcattctgg ttcggcgggt ggcgcaggcg ctcagcattg cccgctgctc
      361 gatcatcatg gccggtcccg acgaccaagt cgggacggtg gtggcggcat tcgagaaccc
      421 gatgctgcac aatctccagg tggacctcaa tcgctatccc gagattcgcc acgccttgaa
      481 gaccggcgag gtggtgctgg tccgcgatgt gcagaccgat ccgttgtacc gcggggtgcg
      541 tgacgattgg gagtctcagg gccggccggt ggaaacccgg tccgcggtgg cgctccgctt
      601 ttctctgcgg cagcagccgg tcggcgtctt cttcctcaga accaccagcg aagacccgcc
      661 gctcaacgag cacgacgtcc agtttgccga agaggttacc agtgcggcag tcgcggcatt
      721 ggaacgggcc tatgatctgg aaaatgccgt gttggggcag gaacagatgc ggcatctcgc
      781 ggagactgat ccgctcacca actgcttcaa tcgccgcgcg ctcatggaaa agctggagca
      841 ggagatggac cgggcggcac gctacgccac catgctgacc ggcatgatgg tggacatcga
      901 caacttcaaa cagatcaacg acacctacgg acacctggtg ggtgaccggg tgctgaagca
      961 actggcgaat ctgctgaagc gggagcagcg gtcggtggac atcgttgccc ggtacggcgg
     1021 ggaggagttt gttgtcctct tgccagaaac caccagcgcc gagtcgcgga actttgccga
     1081 gcgcatcctg cgccgggtgg ccacccacga tttcggagag gcgggccggc cggtccgggt
     1141 gaccatcagc atcggcattg cgtcataccc cgacgagcgg gtgagtgacg gcgaatccct
     1201 gcttcggtta gccgacactc acctctaccg ggccaagagc gacggccgaa accggtttcg
     1261 cgattgagca atcggcgctg cccccggtgc cagacgagct acgctgcgcc cgcgcggttc
     1321 tgtgtcaaag acgggtcgct cctggtggag agcgatgcca gtccgcccgc ccctccgcca
     1381 ggcggagcag cccggatttc tgcccgggac tcagccgagg ccggctccgg agcgggaagc
     1441 gcacgcgaag ccccacccca actggcctca ctgacgggcc aggtgctcga ccagcggtac
     1501 cacatcaccc gcaaattggg cgaaggcggg atgtcgtacg tctaccaggc acaggaggtc
     1561 gacaccggac gcgcagtcgc agtcaagatc ctcattcccc ggctctcccg cgatccggca
     1621 tcggtggagc gcctgcgacg cgaagccacc atcgcgaccc ggctcaatca ccccaacgtg
     1681 tgccccatcc tgcgcctggg tgaaactccg gaccggctga tctatctcgt catgccgttt
     1741 ctggagggag aggcgctcag tgagcacgag actcgccgcg ggccatttcc ggtggcagaa
     1801 ggaattcctc tgctggtcca gatgtgtcat gggctagggc ac
//
LOCUS       DASRPQ010001409         1027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3628363, whole genome shotgun sequence.
ACCESSION   DASRPQ010001409 DASRPQ010000000
VERSION     DASRPQ010001409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3628363"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..756
                     /locus_tag="VFD73_16145"
     CDS             <1..756
                     /locus_tag="VFD73_16145"
                     /inference="COORDINATES: protein motif:HMM:NF013806.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75513.1"
                     /translation="AADTACGLHERIVQQASGGVWVYSRPNAFNTSGQRLCISGSTTR
                     PGFTILNNLRYTGAWQAYPFTGVGCAFNLCSRYTKLPMKVRELPAAANTSFSWRGSAP
                     GNWNTSYDLWLDHYDQITRQDDGAELMIWLRPNPGYRGGTIVHIANRRYWFMHWVTCH
                     NAPQVGVTPPRVSPGEQTGICWNYVQFRFLRVVHSVRRLWIMPFIRFLERKRLVRPSW
                     WLTSVHAGYELVSGGKGLTTTGFKVGHLGGYGG"
     gene            complement(823..>1027)
                     /locus_tag="VFD73_16150"
     CDS             complement(823..>1027)
                     /locus_tag="VFD73_16150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75514.1"
                     /translation="PPASVAHLPDHPRYPHIWQLREELPDVTDDDVFETILSLVIGGL
                     TQIAPHPCSCRSHEPQPAQIDQA"
BASE COUNT          163 a          311 c          363 g          190 t
ORIGIN      
        1 gctgctgaca ccgcgtgcgg gctgcacgag cgcatcgtcc agcaggcatc cgggggcgtg
       61 tgggtgtata gcaggcccaa cgcgttcaac accagcggtc agcggttgtg catctccggg
      121 tccaccaccc gcccggggtt cacgatcttg aacaacctgc gctacaccgg tgcgtggcag
      181 gcctacccgt tcaccggtgt cggctgcgcc ttcaacctgt gctctcgcta caccaaattg
      241 ccgatgaagg tgcgcgagct gccggcggcg gctaacacca gcttttcctg gagggggtcg
      301 gcgccgggga actggaatac ctcctacgac ctctggttgg accactatga ccagatcacc
      361 cgccaggacg acggggccga gctgatgatc tggctgcggc ccaatcccgg ttaccggggc
      421 ggcacgattg tgcatatcgc gaaccggcgg tactggttca tgcactgggt gacctgccac
      481 aacgccccgc aggtgggggt aactccacca cgggtcagcc cgggggagca gaccggaatc
      541 tgctggaact acgtgcagtt ccggttcctg cgcgtggtgc acagcgtgcg gcggctgtgg
      601 atcatgccgt tcatccggtt cctggaacgg aagcgcctgg tgcgcccctc gtggtggctg
      661 acgtcggtcc acgcagggta tgagctggtc agcggcggca aggggctgac caccacaggg
      721 ttcaaggttg gccacctggg tggctacggc gggtgagccc ctgccgggac agcggtgctg
      781 ccctagttca aggtggacgc tcttagcggc gcgatcggtg ccctaggcct ggtcgatctg
      841 cgcaggctgc ggctcgtgcg agcggcagct gcatggatgg ggcgctatct gggtgagccc
      901 gccgattacc agtgacagga tggtttcgaa aacgtcgtca tcggtgacat ctggcagttc
      961 ctcccgtagc tgccagatgt gcgggtatcg cgggtggtcg gggaggtgag ccacgctggc
     1021 tggtggg
//
LOCUS       DASRPQ010001410         1587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3323988, whole genome shotgun sequence.
ACCESSION   DASRPQ010001410 DASRPQ010000000
VERSION     DASRPQ010001410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3323988"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..191
                     /locus_tag="VFD73_16155"
     CDS             <1..191
                     /locus_tag="VFD73_16155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3565 domain-containing protein"
                     /protein_id="HZI75515.1"
                     /translation="QRRIVDFQQDDEGHWVALLECGHRQHVRHDPPWQVRPWVTTPEG
                     RSQWIGRTLECRLCSPSD"
     gene            225..1406
                     /locus_tag="VFD73_16160"
     CDS             225..1406
                     /locus_tag="VFD73_16160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HZI75516.1"
                     /translation="MRSSSRAGTAEAQGGPPLETDDLSEDGATTDVGVGHLKMAVTGD
                     SSTVQQRAGEQMGSAAPLTRFTLGWLGLVAPVALSAQSAAGSVLQPVADVPLPGGTGR
                     FDYQSLDPKSGRLYIAHMGAGRLLVFDTRRDSVVASVPGFPGVTGVLAVPAQNRVYAS
                     VTGRHELAVLDPTTLKVQARVGGIRFPDGIAYAAEAGKLFVSDEFGRRDVAVDAASGR
                     KLGEVPLGGEAGNTQYDSVSKRIWVAVQTKNQLVAIDPASDRVVGRYDLAGADHPHGL
                     FLDIAHRLAFVACEGNARLLVVDLTTMRVTASHRVGDDPDVLAFDPGLQRLYVASESG
                     VVTVFREDGRKLQLLGAYQAPAAHSVAVDPVTHRVYLPLRNVAGKPVLRILSPPMEQT
                     Q"
BASE COUNT          265 a          494 c          531 g          297 t
ORIGIN      
        1 tgcaacggcg gatcgtagat tttcagcagg atgacgaggg tcactgggtc gcgctgctcg
       61 aatgcgggca ccggcagcac gttcgccacg atccgccctg gcaggtgcgg ccgtgggtga
      121 ccaccccgga ggggcggagt cagtggatag gacggacgct cgaatgccga ctctgctccc
      181 cgagtgactg acgcgttttc tcaaagtcgg cgctcgagcg gtcgttgcgc tcgtcctcac
      241 gggccgggac tgccgaggcg cagggtgggc cgccgctgga gaccgacgat ctctcggaag
      301 atggtgctac caccgacgtc ggtgtggggc acctgaagat ggcggtgact ggagattcct
      361 cgacggtcca gcagcgcgct ggtgagcaga tgggttcggc tgctccgttg acgcggttca
      421 ccctgggttg gctggggctt gtggcaccgg tcgcactgtc cgctcagtct gctgctggat
      481 cggtgctgca gcccgttgcc gatgtgccgc tgcccggtgg caccgggaga ttcgattacc
      541 agagcctcga tccgaagagc ggccggctct acatcgcgca catgggcgcc ggccgattgc
      601 tcgtcttcga caccaggcga gactccgtcg tggccagcgt gcctgggttt ccaggcgtca
      661 ccggtgttct cgccgttcca gcgcagaatc gggtctacgc atcggtcacc ggccggcacg
      721 agctcgcggt cttggacccg actacgctga aggtgcaggc tcgcgtgggt ggaatccgtt
      781 ttcccgacgg catcgcctat gctgccgagg cgggcaagct gttcgtctcc gatgaattcg
      841 gccggcgtga cgtagcggtg gatgcggcta gcggcaggaa actgggagaa gttccgctgg
      901 gaggagaagc cggcaacacc cagtacgatt ccgtgtcaaa gcggatctgg gttgcggtgc
      961 agaccaaaaa tcagcttgtt gccatcgatc ccgcgtccga ccgcgtggtt ggccgctacg
     1021 atcttgccgg ggcagatcac ccccacggcc tcttccttga tatagcgcat cggctcgcct
     1081 tcgtggcgtg cgaaggcaac gcccggctgc tggtggtcga cctcacgacc atgcgggtga
     1141 cggcctcgca tcgcgtgggc gacgaccccg acgtgctggc gttcgatccc ggcctccagc
     1201 ggctttatgt cgcctcggag tcaggtgtcg tcaccgtgtt tcgagaggac gggaggaagc
     1261 tccagctcct gggagcatac caggcacccg cggcgcactc cgtcgcggtc gacccggtga
     1321 ctcatcgagt ttacttgccg ctcaggaatg tggctgggaa gccggtgctc cggatcctct
     1381 ctccccccat ggagcaaacc cagtagcttg caacaacatc tctgacgact gacgactgac
     1441 gactgacgac tgataggagt tcaccatgtc acttaccgcc gagcagcgaa cccatataga
     1501 gcatcggctt caggaggagc gcgcgcgggc gcttcgaaca ctcaaccgat cgatcgccga
     1561 gcattccgac gagtccgacc aggatcg
//
LOCUS       DASRPQ010001411         1128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3324330, whole genome shotgun sequence.
ACCESSION   DASRPQ010001411 DASRPQ010000000
VERSION     DASRPQ010001411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3324330"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            287..>1128
                     /locus_tag="VFD73_16165"
     CDS             287..>1128
                     /locus_tag="VFD73_16165"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZI75517.1"
                     /translation="MMRRRHAGLLLLAGLLPGCRERGRTCADCGSVVIAATGEPSSLI
                     PPLVSETVARDISDQIYERLAYLEPGAAPIDQDAYRPGLAQRWERVDSLTWRFHLRPQ
                     ARWQDGRALTAEDVAFSFDAFSDTTFGAAAQGYLAGKVRASAEDSLTVRIGFTGRSSE
                     QLYDATYHVRILPKHIWDTIPRGRWAADTTLAHLVGSGPYRIQSWQRGRFLTLAADTA
                     WTGGDQPSIRRAIWRFAPDPDAALNLVLGHQADLMETVGSKQRADRVAADSSFRLLTY
                     PAGV"
BASE COUNT          186 a          375 c          351 g          216 t
ORIGIN      
        1 gcggccggac gtgtaccatg cctttctgcg gtccatcggc cgggcgtccg ccgccgcata
       61 gtaggcgagt cctggtttgg ccacgcaggt gatgctcctc tctgtaaacc tcccgatcct
      121 gccgatactc ctgaagatgg catcgttccg tacctgagtc tcgtatgcag ccggtaacct
      181 ggcacgtaca aactgttaaa gtcatcccag cgaccaccag gatggcccgc ccacgttcgc
      241 agcctggtac acgcttccgc ccgcccttcg aatggagatg atctggatga tgcgacgccg
      301 acacgccggg cttctgctcc tggccggact gctgcccgga tgccgcgagc gtggtcgtac
      361 gtgtgcggac tgcggcagcg tggtcatcgc cgcgaccggt gagccttcca gcctcatccc
      421 tccactcgtc agcgaaacgg tcgctcgcga tatcagcgat cagatctatg agcggttggc
      481 atacctcgaa ccaggcgctg cgcccatcga tcaggatgcg tatcggcctg ggctggccca
      541 gcgatgggag cgggtggatt cgctgacttg gcggtttcac cttcgtcccc aggcccgctg
      601 gcaggacggc cgggcgctga cagcggaaga cgtggcgttc tcgttcgacg cgttcagcga
      661 caccacgttc ggggccgcgg cccagggtta tctcgcgggg aaggtccgtg caagcgcgga
      721 ggattcgctc actgtacgca tcggcttcac cggacgatcg tccgagcagc tctacgacgc
      781 gacatatcac gtccgaattc tgccgaaaca catctgggac accattcccc gggggcgctg
      841 ggctgccgac accaccctgg cgcatctcgt cgggagtggt ccctatcgca tccagagttg
      901 gcaacgcggc cgcttcctca cgctggctgc agatactgct tggaccggcg gagaccagcc
      961 ctcaatccgg cgcgcgattt ggcgattcgc gcccgatccc gatgcggcgc tgaacctggt
     1021 cttgggccac caagccgatc tgatggagac agtcgggtcc aagcagcggg ccgatcgtgt
     1081 cgcagctgac tccagcttca ggctgctgac gtatcccgcc ggtgtgta
//
LOCUS       DASRPQ010001412         1086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3628960, whole genome shotgun sequence.
ACCESSION   DASRPQ010001412 DASRPQ010000000
VERSION     DASRPQ010001412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3628960"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            125..>1086
                     /locus_tag="VFD73_16170"
     CDS             125..>1086
                     /locus_tag="VFD73_16170"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HZI75518.1"
                     /translation="MTDIKASSNPAAGSNGPRPPLPWESTRGGSNGAGIPGDHLEVSD
                     GAHDLHALQQVKGRVHRKLLERLNLSNLDRLDRQQVADAVRRVVQDLITQESVPLNFE
                     ERDAVVVQVLDEIFGLGPLEPLIKDPEVSDILVNTYKQVYIERHGRLEKTDVMFQDDR
                     HLLQVIDRIVSAVGRRIDDSSPMVDARLPDGSRVNAIIRPLALDGPHLSIRKFKRDAL
                     SGEDLLRTESLTDPMLALLKAIVKARLNVLISGGTGAGKTTLLNILSSFIPPTERIVT
                     IEDSAELQLKQPHVVRLETRPANIEGQGEIPQRMLLINALRMRP"
BASE COUNT          220 a          342 c          329 g          195 t
ORIGIN      
        1 ggcgcaggtg accggaacca aactggatcg ccggctccat caatcgaagt taggtcgggt
       61 tctcaccgcc ccattccacg gcgtgatgag caagatcgga aaaggacggg gaggaaacta
      121 gggtatgacc gacatcaagg cctccagcaa tcccgccgcc ggatcgaacg gtccgcgacc
      181 cccgcttccc tgggagtcta cccgaggcgg ctccaacggc gctggcattc ctggcgacca
      241 cctggaggtt tccgacggcg cacacgacct ccatgcgctc cagcaggtca aaggcagggt
      301 ccaccggaag ttgctcgagc ggctgaatct ctcgaatctc gaccggctgg accggcagca
      361 ggtggcggat gccgtccggc gggtagtcca ggacctgatc acccaggagt cggtgccgct
      421 caacttcgag gagcgggacg ctgtcgtggt gcaggtgctg gacgaaattt ttggcctggg
      481 tcccctggag cctctgatca aggatccgga ggtctcggac atcctggtga atacgtacaa
      541 gcaagtgtac atcgagcgcc acggacggct cgaaaaaacg gatgtgatgt tccaggacga
      601 ccggcatctg ctccaggtca tcgaccgcat cgtctcagcg gtcgggcgcc gtatcgacga
      661 ctcgtctccc atggtcgatg cccggctgcc tgacgggtcg cgtgtcaacg cgatcatccg
      721 gccgctggcc ctcgatggtc cccatctctc gatccgtaag ttcaagcggg atgccctgtc
      781 cggtgaagat ctgctgcgga ccgagagttt aacggatccg atgctcgctc tcctcaaagc
      841 gatcgtcaag gcacggctca acgtcctcat ctccggtgga actggtgccg gtaagacgac
      901 gctgctgaat atcctctcgt ctttcatccc gccgactgag cggatcgtca ccatcgaaga
      961 ctcggccgaa ctgcaactga agcagccgca cgtggtacgt ctggaaaccc ggccggccaa
     1021 catcgaaggc cagggggaaa taccccagcg aatgttgctg atcaatgccc tccgtatgcg
     1081 cccaga
//
LOCUS       DASRPQ010001413         1419 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1749939, whole genome shotgun sequence.
ACCESSION   DASRPQ010001413 DASRPQ010000000
VERSION     DASRPQ010001413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1419
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1749939"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1024)
                     /locus_tag="VFD73_16175"
     CDS             complement(<1..1024)
                     /locus_tag="VFD73_16175"
                     /inference="COORDINATES: protein motif:HMM:NF040572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HZI75519.1"
                     /translation="MPETSRESGALTPALFLPSDFEFGEVPSTEGSTQAPPPSPQAPS
                     LGPLAAFTGTWHGHGFNQIFRPDSGSPTKLPIPVRSDNLLELNLVSQTLSFTRPIGTV
                     PNRGETTPDIFLNGVGYLLTVTDITHPAKPIGIHFEPGVWMNVPATTDPPEGNTLVRM
                     ASIPHGTTLNAQGTFRTFSGPPSIPPVSITPDIGRFPSQTASDSRTARIPQDLAPFIK
                     KGSITQAILDDPNTVLRDATAKQTILSTTALGVASNASSPLFGGGIDDIAFLDGDPNV
                     TEPNAQIPKMASFFWIETVQHALTVPAWSPGQSPLAIRGEATHGPAPVFLVTPPSAVT
                     TPRQLKV"
     gene            1190..>1419
                     /locus_tag="VFD73_16180"
     CDS             1190..>1419
                     /locus_tag="VFD73_16180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75520.1"
                     /translation="MRRLRLHWIVTPGTLLAWHWWLVKRKWTYPNASGRPPAPVEVRA
                     LVEQLARQNPPWVPVHSRRVARPRGTGWGRDDP"
BASE COUNT          234 a          383 c          538 g          264 t
ORIGIN      
        1 tgaccttgag ttggcgcggt gtggtgaccg cggagggtgg cgtcaccaag aacaccggcg
       61 cgggcccgtg ggtggcttcg ccgcggatag cgaggggcga ctggccgggg gaccaggccg
      121 gcacggtgag ggcgtgctga acggtctcga tccagaagaa ggaggccatc ttcgggatct
      181 gcgcgttcgg ctcggtcacg ttggggtcgc catcgaggaa ggcgatgtcg tcgatgccgc
      241 cgccaaacag cgggctactg gcgttgctgg caacgccaag ggcggtggtc gacaggatgg
      301 tctgtttggc ggtggcgtcg cgcaggacgg tgttcgggtc gtccaggatg gcctgggtga
      361 tagatccctt cttgataaac ggggccaggt cctgcgggat ccgcgcggta cgcgagtcgc
      421 tggcggtctg gctggggaac cgcccgatat cgggggtgat gctgaccggg gggatcgagg
      481 gcggcccgga gaatgtccgg aacgtcccct gtgcgttgag cgtggtgccg tgcgggatcg
      541 aggccatccg caccagggtg ttcccctcgg gggggtccgt ggtcgcgggg acgttcatcc
      601 acactccggg ctcgaaatgg atgcctatgg gcttcgccgg gtgggtgatg tcggtgacgg
      661 tcagtaggta gccgacgccg ttgaggaaga tgtccggtgt tgtctcgccg cggttaggca
      721 ctgttcctat tggccgcgtg aaggatagcg tctggctgac gaggttcagc tctaggaggt
      781 tgtccgaccg cacggggatg ggcagcttgg tcggcgagcc gctgtcgggc cggaagattt
      841 ggttgaatcc atggccgtgc cacgtgccag tgaacgcggc cagtggcccc aaactgggcg
      901 cttgtggact ggggggcggc gcctgtgtgc tgccttcggt gcttggcacc tcaccgaatt
      961 cgaaatcgct gggcagaaag agagcaggcg tcagagcgcc ggattcacgg cttgtttcag
     1021 gcattgcgca accccgggat acgcatcgaa ttctccccat gatcgtcgtt caagggtgtc
     1081 ttggcagata aacgatcagc gcatcgccaa agtgcacagt tgaagtaaag aacaagtaaa
     1141 acttggaatc actcagcgcg catacgccat tacgcaccgg ctgcctctga tgcggcggct
     1201 gcggctgcac tggatcgtga ccccgggcac gctgctggcc tggcactggt ggctagttaa
     1261 gaggaaatgg acctacccga acgcttcagg tcggccgccg gccccggtcg aggtgcgggc
     1321 gctggtggag cagctggcgc ggcagaatcc gccctgggta ccggtgcatt cgaggcgagt
     1381 tgctcggcca aggggcaccg ggtggggaag ggacgatcc
//
LOCUS       DASRPQ010001414         1024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_167182, whole genome shotgun sequence.
ACCESSION   DASRPQ010001414 DASRPQ010000000
VERSION     DASRPQ010001414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167182"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..490
                     /locus_tag="VFD73_16185"
     CDS             <1..490
                     /locus_tag="VFD73_16185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75521.1"
                     /translation="VPALLCHCLTRPLWAQAPAAPPAVPLLERLVGRWTVRGVVGSQP
                     AQYQMDGTWTLQHRYVELHMQDVKHRPPQYEARVFIGADTVPGHVLAHWLDIFGAAYS
                     VPPATGLVHGDSLLLDFPYPTGTFHDSFVLDRAQTWKIRLDAADGKGGWKRFAEYQAT
                     PR"
     gene            498..>1024
                     /locus_tag="VFD73_16190"
     CDS             498..>1024
                     /locus_tag="VFD73_16190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75522.1"
                     /translation="MKPAIKRVWLSLAGLLLASAPAPGQSAPIADHHQHLFSPEMAAL
                     LSSGGSEKIQPITARDVVALLDSAGIRKALLLSTAYIYGSPKRTVDDEYAKVRAENDW
                     NAAQASQYPDRLRAFCGFNPLKDYAVRELERCSKDPRLRYGIKLHLGNSDVQLDNPAH
                     VEQLGRVFRAANRHR"
BASE COUNT          179 a          340 c          312 g          193 t
ORIGIN      
        1 cgtcccagct ctgctgtgcc actgcttgac gcggccattg tgggctcaag cgccggctgc
       61 cccgcccgcc gttccgctgt tggagcgcct tgttggacgc tggacggtca gaggcgtcgt
      121 gggctcccag ccggcccagt atcagatgga tggcacatgg acgctgcagc atcggtatgt
      181 cgagcttcac atgcaggatg tgaaacaccg cccgcctcag tacgaggccc gggtcttcat
      241 tggggcagac acagtgcctg gccacgtgct ggctcactgg ctggacatct tcggtgcggc
      301 gtattcggtg cctcctgcca ccgggctggt ccacggcgac tcactcctgc tcgactttcc
      361 ttatcccacc ggaacattcc acgacagctt cgtgctcgac cgggcacaga cctggaaaat
      421 ccgtctcgac gcggccgatg gcaaaggagg atggaagcgc ttcgcggagt atcaagcgac
      481 acccaggtga tcgacgtatg aaacccgcca tcaaacgtgt gtggctctct ctcgcgggtc
      541 tgttgctggc gtcagctccc gcgccaggcc agagcgctcc catcgccgac caccatcagc
      601 acctgttcag cccggagatg gccgcactgc tttcttcggg cggctcggag aagatccagc
      661 ctattactgc tcgcgacgtg gtcgcgctgc tcgattcggc cgggatcagg aaggcgctcc
      721 tgctctcgac tgcctacatc tatggcagtc ccaagcggac ggtggatgac gagtatgcca
      781 aggttcgcgc cgaaaacgac tggaatgccg cccaggcgag ccagtatccc gaccggctgc
      841 gcgccttttg cggcttcaac ccgctcaaag actacgccgt gcgagagctg gagcgctgca
      901 gcaaggatcc gcggcttcgt tacggcatca agctccatct cggcaactcc gatgtgcagc
      961 tcgacaatcc ggcccacgtc gagcagctgg gccgagtgtt ccgggcggct aaccggcacc
     1021 ggat
//
LOCUS       DASRPQ010001415         1757 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3927036, whole genome shotgun sequence.
ACCESSION   DASRPQ010001415 DASRPQ010000000
VERSION     DASRPQ010001415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1757
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3927036"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VFD73_16195"
     CDS             complement(<1..280)
                     /locus_tag="VFD73_16195"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003953 - NAD+ nucleosidase activity
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HZI75523.1"
                     /translation="MGEMDPMSGGRQQRQMGGAPSRLRVFINYRRDDTWAAAQLVYDR
                     LANSFGGENVFLDVQDLQPGMNWLEEIKSHRASSDVLLSLIGPHWVSIM"
     gene            851..>1757
                     /locus_tag="VFD73_16200"
     CDS             851..>1757
                     /locus_tag="VFD73_16200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75524.1"
                     /translation="MSYNVRNRSANHRLIYWQQRAGFNNTRLAAAIRERAGKTGHRHV
                     QPDARRVRAWRQGEQPRDPVPGLILEVLSDRINLSLTLSDVGLDSSGAERARWDGPWL
                     PAQTVAELLTFAQGDLILGRRGPESQLLEFLGGEELLSVVQPWTTTAADPSGAGIERG
                     RKRIGDQEIVQIRAVTEAFRSLDNAYGGGRTREAVIGQLISTASLVEDTTYTEAVGRK
                     LIAALGDLATVAGWMCHDVSMHAAAQHYFLLALQAAKEADDSNLGAHVLSCMARQAGH
                     LGRPGDALELIHLARYGTRHTATPTV"
BASE COUNT          331 a          568 c          568 g          290 t
ORIGIN      
        1 tcatgatcga cacccaatgg ggcccgataa gcgacagcag cacatcagac gaagcgcggt
       61 gagatttgat ttcctccagc cagttcatcc ccggctgcaa gtcctgcacg tccaggaaca
      121 cattctcgcc gccgaagcta ttcgcgagcc ggtcatacac cagctgggcc gcggcccatg
      181 tatcatcgcg ccggtagttg ataaacaccc gcaaccgcga tggagccccg cccatctgcc
      241 gctgctgacg gccgcctgac atcgggtcca tctcgcccat cccctacgtg cccggtacgg
      301 tgaccggccc cagggtggcg ccccaggcgc cgatcggggc gccggcacgg gtcgcagaac
      361 taacctgccc ggcagcatca ggccccgccg ccccagcgtc aacggcagcc tggccagtcg
      421 cggccaggga caacggaacg tctaatgcag cagcagccag gttaggaaaa gttcggtgaa
      481 tacgcatcgg tccccccatt ccacgcaccg atcgcgaggc cgtcacgggt gtcctaggcg
      541 ggacggcctt caccgcaccc ttggtcgcct agccgaagct ggttttggca gtgcctcctc
      601 tggctgctta ccgtcaggag acaacaggaa ctagccgttg ggaagcaggc gaaatgggag
      661 gcgcagcgcg gctgaggggg aggcgtcggg aaggcgccgt gaaggggggc accggctgag
      721 gggtgggcga atagtgggcg cttgttcggc cagcccgtac ggatcacgct gctgcagtta
      781 ttctcaacct aaggctgctg caattattct caagctaggt tagccgttgc tggcggggag
      841 gcgggcctgg gtgagctaca acgtccgcaa tcggtccgca aatcatcggc tcatctattg
      901 gcagcagcgc gcgggcttca acaacacccg gctagccgcc gccatacggg agcgcgcggg
      961 caaaaccggg caccggcatg tccagcccga tgcccgccgg gtccgggcat ggcggcaagg
     1021 cgaacagcca cgcgacccgg ttcctggcct gatactagaa gtattaagtg accgcatcaa
     1081 tttgtcattg acgctatccg acgtcggact cgacagctcc ggagcagagc gagcccggtg
     1141 ggatgggccc tggttgccag cccaaaccgt cgccgaactc ctcacgttcg cccaaggcga
     1201 tctgatactt ggccggcgtg gcccagagtc gcagcttctg gagttcctcg gaggtgagga
     1261 gttgctcagc gttgtccagc cctggacgac cacagcggca gatccgtccg gggccgggat
     1321 cgagcgcggc cgcaaacgga tcggtgacca agagatcgtg cagatccgtg cggtaacgga
     1381 ggcgttccgg tcgctggata acgcctatgg cggcggacgt acgcgggaag cagtcatcgg
     1441 acagctcatc tcgacagcct cgttggttga ggacacgacc tacaccgagg cagtggggcg
     1501 gaagttgatc gctgcgcttg gtgacctggc tacggtcgcc ggctggatgt gtcatgacgt
     1561 gtcgatgcac gccgccgccc agcactactt cttgctggcg ctccaggccg ctaaagaggc
     1621 cgatgactcc aaccttggag cgcacgtcct tagctgcatg gcccggcagg ccggtcacct
     1681 gggccggccg ggggatgcac tagaactgat ccatctcgcc cggtatggca cccgccacac
     1741 ggccacgccc actgttg
//
LOCUS       DASRPQ010001416         3837 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4230855, whole genome shotgun sequence.
ACCESSION   DASRPQ010001416 DASRPQ010000000
VERSION     DASRPQ010001416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3837
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4230855"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..314)
                     /locus_tag="VFD73_16205"
     CDS             complement(<1..314)
                     /locus_tag="VFD73_16205"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HZI75525.1"
                     /translation="MTLGKLALSLPVPGDVNACLEWARRAEDLGYESIWIAETGGPDP
                     FVLAGAVAQVTKRVRIGLAVSPVFIRTPATIAAAAGTVSQLAPGRFILGLGASSHAIV
                     GG"
     gene            complement(486..1607)
                     /locus_tag="VFD73_16210"
     CDS             complement(486..1607)
                     /locus_tag="VFD73_16210"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI75526.1"
                     /translation="MSDAFFSSDDFDEQAHHLYNEGRYDEALTVLNEGISLYPHAVEL
                     HIGRAYAQLAREEYAWSRRSFEQALALDPDHEDGLAGLGETLLKLGDRAGAMRVMERI
                     LQLGFQDDHELMLQIGRALFREGLVAPAHRFFDLAAAAHPESPDAAACLGYAAHRLGN
                     DAGSLYWLRRALEIDAGYSEARIYLANLLYDRGESEAALHQLERTQPEEHYDELGIWR
                     HIELKKTIYRLPDEDPELAPWLLRLSEVAGEPDAIDMLLAEVEAQQADGGVRDPHQLE
                     LFGTLLSELHAMQKRPAHSESSHLVMTLAGQSIRGTWEEILQQMKAADREWAHGSMSD
                     FMASLARRGQAETGVVIPTTDPEAFIRGSAEAGVLRIVQ"
     gene            1852..3168
                     /locus_tag="VFD73_16215"
     CDS             1852..3168
                     /locus_tag="VFD73_16215"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HZI75527.1"
                     /translation="MKRVVLGWALCLGTVSAVPALAQAPAAPTKPLTLLDAITLGRQR
                     GVEEAIARLNARAAEARVGQRRAELLPNINGQGSFTRQTLNLAEFGFPGISGITDPFN
                     VYSFQLRASQTLFDASAIARLRAGRDTAAAAGLDAQAVGEISGATAGVAYLRLLSAQE
                     TVQARTADSIVAAELLGQARQLVQAGVNPAIDATRSEVSFASVRTQLEIARNSADRAE
                     LDLVRALDLPSGTKLQLADSLGITPLSIPREPEAAASFAREHRAELAAERSRTRAARR
                     DLSAIRYEYLPSLGINGGYRESARDLGGLAGSYNLQLLLTVPILDGFRRQNRVKEQQA
                     RLEIQEIRERDLTNQVETEARQAVLDVASAEQQVSIARERVRLAEQELSEAQERFRAG
                     VAGSVETTNAQSSVIAARDAMIQARVNYGTARVSAYRALGVIDQLH"
     gene            3190..>3837
                     /locus_tag="VFD73_16220"
     CDS             3190..>3837
                     /locus_tag="VFD73_16220"
                     /inference="COORDINATES: protein motif:HMM:NF024923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HZI75528.1"
                     /translation="MAEETPEAPETEAPRMKRRRLPLLIVGVLVLALAVWGIHRYLYS
                     RHHVSTDNAQVDAHITLIAPRVAAFVSKVLVDDNQHVDAGDTLVILDDRDLKVKLEQA
                     EADLRAAQAATGSRGRPGEAQAQFQASRAQAGSVQAAVTAAEADYKKAAADVERYRKL
                     AGQKIVSAQQLDAAEAAFNAARANLEAARRNASAAGSQVSASGAAIRGADARMAAA"
BASE COUNT          722 a         1230 c         1237 g          648 t
ORIGIN      
        1 cagccgccga cgatggcgtg actcgaggcg ccgaggccga ggatgaaccg gcccggcgcc
       61 agctgcgaca ccgtgcccgc cgccgccgcg atcgtcgccg gggtgcggat gaacaccggc
      121 gacaccgcca ggccgatgcg cacccgtttc gttacctgcg ccaccgcgcc ggcgagcacg
      181 aacggatcgg gccctccggt ctcggcgatc cagatgctct cgtaccccag gtcctcggcc
      241 cgccgcgccc attcgagaca cgcgttgaca tcgccgggaa cgggaaggct gagcgccagt
      301 ttgccgaggg tcatgggagg tcttaatcag aaggcgtgac cggtgaccag tgaccggtga
      361 gcggtgagcc gtgagcggtg agcgggagct ggaaacggcc attgcaatcg gatcctggtc
      421 aaaagcaaag cggggaaacc gagaacttaa ccggcctccc cgcttaccgc ttggcgctag
      481 cgcagttact gcacgattct caggaccccg gcctcggcac tccctcgaat gaatgcctcc
      541 ggatcagtgg tgggaatgac gactccggtc tcggcttgac ctcgccgagc caggctggcc
      601 atgaaatcgc tcatcgagcc atgagcccac tcgcggtctg cagccttcat ctgctggaga
      661 atttcctccc aggtgccacg gatggactga ccggccaagg tcattaccag atgagacgac
      721 tcactgtggg ccggccgctt ctgcatggcg tgaagctcgc tgagcagcgt cccgaaaagc
      781 tccagctgat gcgggtcccg taccccaccg tctgcctgct gagcttccac ctcggccaga
      841 agcatatcga ttgcgtccgg ctctccggca acctcgctga gccggagcaa ccagggcgcc
      901 agctccggat cctcatccgg cagccggtaa atcgtcttct tcagctcgat gtgacgccag
      961 atgcccagct catcgtagtg ctcctccggc tgagttcgtt ccaactggtg cagcgcggct
     1021 tcgctttcgc cccgatcgta caatagattc gccagataga tgcgggcctc actgtagccg
     1081 gcgtcgatct ccagcgcccg gcggagccag tagagtgaac cggcgtcgtt gcccagccgg
     1141 tgagcggcgt agcccaggca tgcggcggcg tcaggcgact ccggatgagc ggccgccgcc
     1201 agatcgaaga accggtgagc cggcgcaacc agaccttcgc ggaagagagc ccgcccgatt
     1261 tgcagcatca attcatggtc atcctgaaac cccaactgga ggatgcgctc cataacccgc
     1321 atggccccgg cgcgatcacc gagcttgagc agggtttcgc ccagacctgc cagcccgtcc
     1381 tcatgatcgg gatccagcgc cagcgcctgt tcgaagctcc ttcgagacca ggcatattct
     1441 tcccgagcca gttgggcgta cgctcttccg atatggagtt caaccgcgtg cggatatagc
     1501 gagatacctt cgttcaaaac ggtcagggct tcatcgtagc ggccttcgtt atagaggtga
     1561 tgggcttgtt cgtcgaagtc gtcggagctg aagaatgcgt ccgacatcgg caggacctcc
     1621 cgaggcaggt taccgacaag ctaagaaact gagtggacca gagcaagatg atttcttctg
     1681 tatgaagctt agccaaaggg acccggcgag cggtgagcac agtcactgca attcagtgca
     1741 ggttggtagc ttagtctggg acgaaggaga gtcgggagtc cgttcgtttc ctgccgcacg
     1801 agtcccggca agcggccggt gagagcaatc ctgcttcgga gcggtcattc catgaagcgc
     1861 gtagtcctcg gctgggcgtt atgcctcggt accgtgtcgg cagtgccagc gttggcgcag
     1921 gctccggctg caccgaccaa accgctgacc ctgctcgatg ccatcacgct ggggcggcag
     1981 cgcggcgttg aggaagcgat cgcccgtttg aacgccaggg cggccgaggc gcgggtggga
     2041 cagcggcggg cggagcttct gcccaacatc aatggccagg gctcgttcac ccgtcagacg
     2101 ctgaacctgg cagagtttgg atttcccggg atcagcggca ttaccgaccc attcaatgtc
     2161 tacagctttc agttgcgcgc ttcccagact ctgttcgatg ccagcgcaat cgcgcggctc
     2221 agggctggcc gggacaccgc cgccgctgct gggctggacg cccaggcagt tggcgaaatt
     2281 tccggcgcca ccgccggcgt ggcatacctc cgacttctca gcgctcaaga gacggtgcag
     2341 gcgcgcactg ctgacagcat cgtagccgcc gagttgttgg gccaggcccg gcaattggtg
     2401 caggccggag tcaacccggc aatcgacgcc acccggagcg aagtcagctt tgcctcggtg
     2461 cggactcagc tggagatcgc ccgcaactcc gccgaccggg ccgagctcga cctggtccgg
     2521 gctttggatc ttccgtcggg aaccaaactt cagttggctg actctctcgg gatcaccccg
     2581 ctgagtattc cgcgtgagcc cgaagcggct gccagctttg cccgtgagca tcgcgcggag
     2641 ctggctgccg aacggtccag gacccgggcc gcccggcgag acctgagcgc gattcggtac
     2701 gagtatctgc ccagcctggg gataaacggg ggctaccggg aaagcgctcg agaccttggc
     2761 gggctggccg ggagctacaa cctccaactc ctcctcaccg tgccaatcct cgacggtttc
     2821 cggcgacaga accgggtcaa ggaacagcag gcccgcctcg agattcagga gatccgcgag
     2881 cgcgacctga ccaatcaggt tgaaaccgaa gcccggcagg cggtgctgga cgttgcctcc
     2941 gccgagcagc aggtgagcat tgcccgagaa agagtccgct tagccgagca ggaactttcc
     3001 gaggctcagg aacggtttcg tgcgggagtg gcgggcagcg tggaaaccac caacgcgcaa
     3061 agctcggtga tcgccgctcg tgacgcgatg attcaggccc gggtgaacta cggcaccgct
     3121 cgcgtcagtg cctatcgggc acttggcgtc atcgatcaac ttcattgatg tcaggaacga
     3181 ggcagcacca tggctgagga aaccccggag gcgccggaga ccgaagcgcc gcgaatgaag
     3241 cgacggcggc tcccgctcct cattgtcggg gtgctggtgc tcgcgctggc ggtgtggggc
     3301 atccatcgat acctctactc cagacatcat gtctcgaccg acaacgccca ggtagatgcc
     3361 catatcactc tcattgcacc ccgggtcgcc gcgttcgtgt ccaaggtgct ggtggatgac
     3421 aatcagcacg tcgacgcggg agatactctg gtgattctcg atgaccgcga tctgaaggtg
     3481 aaactggagc aagccgaggc cgatctccgt gccgcgcaag ccgccacagg cagccgcggc
     3541 cgacccggag aggcccaggc tcaatttcag gcgtcacgtg cccaggcggg ctcagtccag
     3601 gctgccgtga cggcggcgga ggccgactac aagaaggcag cagcggatgt ggagcggtac
     3661 cgcaagctgg cgggccagaa gatcgtctcg gcccagcaac tggatgccgc cgaggccgca
     3721 ttcaatgccg cgcgcgcaaa tctcgaagcg gcccggcgga acgcgtcagc ggccggaagt
     3781 caggtctcgg cgtcgggtgc agccatacgc ggtgccgacg cgcgaatggc ggcggcc
//
LOCUS       DASRPQ010001417         1017 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2351788, whole genome shotgun sequence.
ACCESSION   DASRPQ010001417 DASRPQ010000000
VERSION     DASRPQ010001417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2351788"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..294
                     /locus_tag="VFD73_16225"
     CDS             <1..294
                     /locus_tag="VFD73_16225"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI75529.1"
                     /translation="VFKAADGSEAMRLWQSVGADLVITDLHMPNKDGIQTIVELLSHA
                     PGTPIIAMSGGGQTKRLDLLGSLPLLGRVLTIEKPFTLNEMMLVVGQALKRAS"
     gene            425..>1017
                     /locus_tag="VFD73_16230"
     CDS             425..>1017
                     /locus_tag="VFD73_16230"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HZI75530.1"
                     /translation="MTRPIETPGFSFRRVQIGTVLPTDEQATRVRLESMFLSRRRFML
                     STAGVVLGAARTRAAWPLQTLLAAGPRRSGPSWQPNVALLRNLPRLLELSSVPGLALG
                     VVEGGRIWSRGFGMAVEDPAEQATSETVFEGASLGKPLFAYAVLRLVDARHFDLDRPL
                     YQYLPLPEASGDRMRRVTARNVLSHTTGLPNWRQQPGP"
BASE COUNT          188 a          340 c          308 g          181 t
ORIGIN      
        1 gtgttcaagg ccgccgacgg cagcgaagcc atgcgtctct ggcagagcgt cggcgccgac
       61 ctggtgatca cggatcttca catgcccaac aaggacggga ttcagaccat cgtcgagcta
      121 ctgagccatg ccccgggaac cccgatcatt gccatgtcgg gcggcgggca gaccaagcga
      181 ctcgacctcc tcggcagcct tcccttactg ggtcgggtcc tcaccatcga aaagccattc
      241 acgctcaacg agatgatgct cgtggtgggg caggctctca aacgagcaag ctgagccgtt
      301 ttcattccgg aaactccagg caccaagatc atatcccccg aaatcgcgcc tggtaagagc
      361 attgagccct ccaggcgccg cgcaaccctt tcctcacagc gagtatctag agtgagtgcg
      421 gccgatgacg cggccaatcg aaacgccggg cttctcgttc cgtagggttc aaatcgggac
      481 cgtcctccct accgacgagc aggccaccag ggtgaggctt gaatcgatgt tcctgagccg
      541 tcgccgcttc atgttgagca cagcaggggt agttctgggg gccgcacgaa cgcgggcggc
      601 atggcccctg caaaccctcc tcgccgccgg gccgaggcgg tcgggtccca gctggcagcc
      661 gaacgtcgcc ctgcttcgaa acctcccccg tctgctcgag ctctcctcgg tccctggcct
      721 ggccctggga gtagtggaag ggggccggat ctggagtcga gggtttggga tggcggtaga
      781 agaccccgcc gaacaggcca cctcagagac agtcttcgaa ggtgcctcgc tgggaaagcc
      841 gttgttcgcc tacgccgtgc tccgcctggt ggatgcccgc cacttcgatc tcgatcggcc
      901 gctgtatcag tacctgccgc ttccggaagc cagcggtgac cgaatgcgta gagtcaccgc
      961 ccgtaacgtg ctcagccata ccaccggtct tcccaactgg cggcagcagc ctggccc
//
LOCUS       DASRPQ010001418         1495 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1429248, whole genome shotgun sequence.
ACCESSION   DASRPQ010001418 DASRPQ010000000
VERSION     DASRPQ010001418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1495)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1495)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1495
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1429248"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            377..>1495
                     /locus_tag="VFD73_16235"
     rRNA            377..>1495
                     /locus_tag="VFD73_16235"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          299 a          451 c          489 g          256 t
ORIGIN      
        1 ccgctacccg ccgagccaga tgcacaacac cgcccgcgat gctagcacac catttcagtt
       61 gacagcctgt cacacgtgtg ctatactccc ggtcgttgtt cccgccgccg tctcactccg
      121 ctccgcggag gtagacccaa caacccggct cctcaggctc cctttctcgc gaaacgcgcc
      181 gctcctcacc gagcggagac gtcgccaggt ggagatcgcc cgcgcggcgc cctcccctgg
      241 ttttttgttc gcctgagcgc ccggtcgcgg cactgcacct tcacaactga atcgtgatga
      301 tgaccacctg tatccgcttg tgccagtaac gggtccggtg ggggacggtc ggagcctcgc
      361 tccgccgctc catccacctc tgaagagttt gatcctggct caggacgaac gctggcggcg
      421 tgcctaatgc atgcaagtcg cacgcacgtg ccttcgggca cgtgagtggc gcacggctga
      481 gtagcacgtg ggaacgtacc ccgtggtggg ggataacgcc gcgaaagcga cgctaacccc
      541 gcatagcgtc ttcggacgaa agcgcgtgca aacgcgcgcc acgggagcgg cccgcggccc
      601 atcaggtcgt tggtgaggta acggctcacc aagccactga cgggtagctg gtctgtgagg
      661 acagacagcc agactgggac tgagacacgg cccagactcc tacgggaggc agcagcaagg
      721 aattttcgtc aatgggggca accctgaacg agcaacgccg cgtgcgggat gacggccttc
      781 gggttgtaaa ccgcttttgg gggggaagag actgacggta ccctccgaat caggctcggc
      841 taactctgtg ccagcagccg cggtaagtca gaggagccaa gcgttgtccg gactgtctgg
      901 gcgtaaagcg cccgcaggcg gccgtgcgcg tggggtgtga aagctctcgg cttaactgag
      961 agaggccatc ccatacggca cggctcgagc cgtccagagg ccggtggaat tgccggtgta
     1021 gtggtgaaat gcgtagagat cggcaggaac acccaggggg aaaccagccg gctggggacg
     1081 cgctgacgct caggggcgaa agcgtgggga gcgaaccgga ttagataccc gggtagtcca
     1141 cgccgtaaac gatggccact cggcctttgg gtggggaacc tcctcgcctg ggggccttag
     1201 ctaacgcggg aagtggcccg cctgggaact acgagcgcaa gcttaaaact caaaggaatt
     1261 gacggggccc gcacaagcag cggagcgtgt ggtttaattc gacgcaacgc gcagaacctt
     1321 acctgggctt gacatgcacc ggacacttct agagatagga gctcccgaaa gggtcggtgc
     1381 acaggtgctg catggctgtc gtcagctcgt gtcgtgagat gttgggttaa gtcccgcaac
     1441 gagcgcaacc cctattgcca gttaggatgt ctggcgagac tgccggggag taacc
//
LOCUS       DASRPQ010001419         1431 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4230946, whole genome shotgun sequence.
ACCESSION   DASRPQ010001419 DASRPQ010000000
VERSION     DASRPQ010001419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1431
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4230946"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(933..>1431)
                     /locus_tag="VFD73_16240"
     CDS             complement(933..>1431)
                     /locus_tag="VFD73_16240"
                     /inference="COORDINATES: protein motif:HMM:NF041278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CmcJ/NvfI family oxidoreductase"
                     /protein_id="HZI75531.1"
                     /translation="IRRRIPGAEDRSAAPRQPVARVHVDHTERSGPQRVRDLLPEEAE
                     ALLRGRVQIVNLWRPLAGPVRDMPLAVCDAASTAPSDLVASDLIYPDRTGETYQVRFN
                     PVHRWYWLPEMMPDEALLLKCYDSALDGRARFSPHTAFADPGAPPDAPPRQSIEIRAL
                     LFHEV"
BASE COUNT          253 a          472 c          448 g          258 t
ORIGIN      
        1 aggggagagg ggagagtgat gcggagttcg tggatccaga gctgttttta cagtaagctg
       61 gagagctgcg aagccgtcta gctggagaaa gggtcagcgg tctagccttg atgcttcaga
      121 gttgcctaga caactaaggg caatgaggat ggcggttgtg attttataat cgaacagata
      181 aaatccaacg gggagaaagt agagtcgagg acgggcgcgg tggcttgggc catccggcat
      241 caccccgttt cccgtccccg ctcatcgaac gcagcatgcg gatttcccgc actacgctct
      301 ccgactggct tcaccgcaac gtccacgacg aggcccatga tcgctcgcgt ctgagcgatg
      361 gacagcgtct tcgcgttgcc gcagagctcc ttccgacggc tcctggcacg tcaggtgttt
      421 gcaggctctc gccaatcacc atgccctcgc gatcttcaga agcgtaccag aagtcagggt
      481 ccttccctcc accggcgtta cccggcctca gcagtcatat gaccctgtcc gactcccgct
      541 gacaccgccg cccagggcga cgttgaggcc gctaccctca tgccaaacgg gcctcccccg
      601 atgacccaaa ccacccttcc aacgtgccgt gcccactacc ccggcggatc gaatgggtgc
      661 agatgtcgat tgcttcccca ttcacacggc cttccccgtt attcaggcgg gtcggcatcc
      721 gcatcatcac tttcgaggcc tgctcagact tcactcacgt tacagcccgc tggattgctc
      781 aaccgcccga ggcggccttt gtcacgaggc ttcgaccaga tcggttaccc gaccaagccg
      841 ctcgtcagct accgaagcaa tcgacaactc tccgggtgaa atcttcctcc actggtggtt
      901 cgcgccttcg gggcgcactg aataaggtgg ggtcaaacct cgtggaagag cagggcgcgg
      961 atttcgatgc tctgccgtgg cggggcgtcc ggcggcgcgc cgggatcggc gaaggcggtg
     1021 tgcggcgaga agcgcgcccg gccgtccagc gcgctgtcgt agcacttcag cagcaacgcc
     1081 tcgtccggca tcatctccgg cagccagtac cagcgatgca ccgggttgaa gcgtacctgg
     1141 taggtctcgc cggtgcggtc cgggtagatc aggtcgctcg ccaccaggtc gctgggcgca
     1201 gtgctcgccg catcacagac cgccagcggc atgtcgcgca ccggcccggc gagcggccgc
     1261 cagaggttga cgatctgcac gcggccgcgc agcagtgcct ctgcctcctc gggcagcagg
     1321 tcgcggacgc gctgaggtcc ggagcgctcg gtatgatcga catgcacgcg cgccaccggc
     1381 tggcgcggcg ccgcgctgcg gtcctcggcg ccggggatcc ggcgacggat g
//
LOCUS       DASRPQ010001420         1270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1750467, whole genome shotgun sequence.
ACCESSION   DASRPQ010001420 DASRPQ010000000
VERSION     DASRPQ010001420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1270
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1750467"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1240)
                     /locus_tag="VFD73_16245"
     CDS             complement(<1..1240)
                     /locus_tag="VFD73_16245"
                     /inference="COORDINATES: protein motif:HMM:NF012873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="condensation domain-containing protein"
                     /protein_id="HZI75532.1"
                     /translation="MARLRSVFGVEVPITWLFEAPTIARLSQRVEGLLRGVQGSEMPA
                     LVPVERTPEQDLLLSFAQQRLWFLDQLEPGTATYIIPSAVRLRGQMDRMALAAVLDQV
                     IRRHENLRTTFPSQQGRPVQQIAAEPTTGLVILDLRHLGAEVREREARRLAQQEVEAP
                     FDLGRGPPLRARLLRLGEQDQVLLLSMHHIISDGWSSGVLIRELSQLYLGRVQGEAVT
                     LPALPIQYVDYALWQRNWLQGAVLQEQLDYWKRSLEGIVPLELPTDHPRPVMQSARGA
                     RQRLRLSRELGQQVRALSQQVGVTPFMTLLAVFEVLLARYSGQHDIAVGTPIANRTRE
                     EVEGLIGFFVNTLVLRTDLSGNPTFLELLNRVRTVALGAYSHQDLPFEHVVDTVQPQR
                     DLSRSPLFQVFFALQNTPEVS"
BASE COUNT          251 a          445 c          360 g          214 t
ORIGIN      
        1 ctgacacctc tggcgtgttt tgcaatgcaa agaacacctg gaagagcgga gaacggctca
       61 gatctcgctg cggttggaca gtatctacca cgtgctcaaa gggcagatct tgatggctgt
      121 aggctcctaa agcgactgtg cggacccggt ttaacagttc cagaaaggtg ggattgcccg
      181 agaggtcggt gcgcagcacc agcgtattga caaagaagcc gatgagcccc tccacttcct
      241 cgcgcgtccg gttggcaatc ggcgtcccca ccgcgatgtc gtgctgacca ctgtagcgcg
      301 caagcagcac ctcaaagacc gccagcaagg tcatgaacgg cgtcaccccc acctgctgcg
      361 agagcgcacg cacctgctga cccagttccc tcgacaaccg cagccgctgc ctagctcccc
      421 gtgcgctctg catgaccgga cgaggatggt cggtgggcag ttccagcggg acgatgccct
      481 ccaggctccg cttccagtag tccagttgtt cctgcaatac cgccccttgc agccagttcc
      541 gctgccagag cgcatagtcg acatactgga tcggcaatgc cggcagcgtg accgcctccc
      601 cctgcacccg ccccagatac aactgactca gttcccggat cagcaccccg ctggaccagc
      661 cgtccgagat gatgtgatgc atcgagagca gcagcacctg gtcctgctcc cctagtcgga
      721 gcaagcgagc acgcagcggc ggaccacgcc ccaggtcgaa gggcgcttcc acctcttgct
      781 gagctagccg ccgcgcttcc cgctcacgga cctccgctcc cagatggcgc aggtccagga
      841 tcaccagccc ggtcgttggc tccgccgcga tctgctgcac cggcctgcct tgctggctgg
      901 gaaaggtcgt gcgcaggttc tcatgtcgcc ggatgacctg gtctaatacc gccgccagag
      961 ccattcgatc catttgcccc cgcaggcgga ccgcactggg aatgatataa gtagcagtgc
     1021 ctggctccaa ttggtccagg aaccacaaac gctgctgagc aaaggagagc aacagatcct
     1081 gctccggcgt acgctccact ggcaccagcg ccggcatctc cgagccctgc actccacgca
     1141 agagcccttc cacccgttgg gagagccgcg cgatggtggg ggcctcaaag agccaggtga
     1201 tgggcacctc caccccgaac acgctgcgca atcgcgccat cagccgcgtt cccagcaacg
     1261 aatgcccccc
//
LOCUS       DASRPQ010001421         1081 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_788216, whole genome shotgun sequence.
ACCESSION   DASRPQ010001421 DASRPQ010000000
VERSION     DASRPQ010001421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_788216"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            45..>1081
                     /locus_tag="VFD73_16250"
     CDS             45..>1081
                     /locus_tag="VFD73_16250"
                     /inference="COORDINATES: protein motif:HMM:NF021606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2339 domain-containing protein"
                     /protein_id="HZI75533.1"
                     /translation="MTDGDRIEQLEARVARLEELVARQRDSGPAGQQQPKSQVPSSRQ
                     EPPLAASAPRPEPVSRAPSAPLPRRPAAPLLSSEQWIGQRALLAIGVTALILAAGYLL
                     RLSFDRGWISPIMRCIGGVVVGCIVGTIGWRFQPRYRTYGAALIGCGAAIIYLSVWAA
                     ARLYGVLPPTTGIVGLALVSVALAMIAYAIDVEALGTTAALGALFAPLLLGRDYGNAD
                     LLLLYLACMAAGLGLVAARRRWRQTMCVVALSVFGVAYAGSADRGNPWGVLLYGVLGG
                     STGIYVGFREDWWETRFLSFTGGWTFVAAAARHLPHSWAVLAGGLVLAAPVWWYGLRP
                     DRAALRQDTASG"
BASE COUNT          139 a          352 c          363 g          227 t
ORIGIN      
        1 caccccgctg tcgcacagca ggcaacggaa ggagcggaag cctgatgacg gacggagatc
       61 ggatcgagca gctggaggcg cgggtggcga gactggagga gttagtagcg aggcagcggg
      121 acagcgggcc agcggggcag caacagccga aaagtcaggt tccaagctcc agacaggaac
      181 cccctctggc cgcctctgct cctcgtcctg aaccagtctc tcgagctcca tctgccccgc
      241 tgccccgccg ccccgctgcc ccgcttctct cctccgagca gtggatcggc cagcgcgctc
      301 tccttgccat cggagtcacg gcgctgattc ttgcggcggg gtatttactg cggctgtcgt
      361 tcgatcgggg atggatctct ccgatcatgc gctgcatcgg aggcgtcgtc gtggggtgta
      421 ttgtgggcac catcggctgg cgcttccagc cgcgctatcg gacttatggc gcagcgctga
      481 tcggctgtgg cgcggcgatc atctatctca gtgtctgggc tgcggctcgc ttgtacggcg
      541 tccttccgcc gaccaccggc atcgtggggc tggcgctcgt ctccgtcgcg ctcgccatga
      601 ttgcgtatgc catcgacgtg gaagcgctgg gcacaactgc cgccttgggg gcactcttcg
      661 cgccactcct cctcgggcgc gattacggaa acgccgatct tctcctcctc tatctcgcat
      721 gcatggccgc gggtctcggc ctggttgccg ctcggcggcg ctggcgccag acgatgtgcg
      781 tcgttgcgct cagcgttttt ggtgtcgctt atgccggctc agccgatcgt ggcaatccct
      841 ggggcgttct gctgtacggt gtcctcggcg ggagtaccgg gatctacgtg ggtttccgcg
      901 aagactggtg ggaaaccagg tttctctcct tcaccggcgg ctggaccttt gtcgcggccg
      961 cggcccgaca ccttccccat tcgtgggccg tgctggccgg aggtcttgtt cttgccgcgc
     1021 cggtgtggtg gtatggcctg cggccggatc gcgcggctct ccgtcaggat acggcttccg
     1081 g
//
LOCUS       DASRPQ010001422         1432 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2065301, whole genome shotgun sequence.
ACCESSION   DASRPQ010001422 DASRPQ010000000
VERSION     DASRPQ010001422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1432
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2065301"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            442..717
                     /locus_tag="VFD73_16255"
     CDS             442..717
                     /locus_tag="VFD73_16255"
                     /inference="COORDINATES: protein motif:HMM:NF019984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron maturase-specific
                     domain-containing protein"
                     /protein_id="HZI75534.1"
                     /translation="MTLCSSSGVSQLRPSVRYACLPHAEGPFSIRERAYQRRSPALAT
                     APAHHLTPAELVWWVNPIVRGWMSYYGRFYRSAPYPLLGRINHYMMR"
BASE COUNT          259 a          464 c          436 g          273 t
ORIGIN      
        1 taggcggcgc tcacccactg caggtccggc aggctcgccc gcagatctcg ctgaatcgat
       61 ggcagcgcca cgctcactat ggtgatatcc agcagcaaca tgaacaccgc cgtgcacacc
      121 agtgccaggg tccaccgctg ccgcgacgac gtcctcggga tttcagccat ctacctcacc
      181 acccaagagg tcacgatgat gcccttaacg ctctcgccgc cgctggtcct cgccgacgcg
      241 gacggcgacg cggctgtcgt tgcggggatg gccaacgcga tccctgccgc cagtgcccta
      301 tgacctttgc ttgcacggtt tctcccggaa tagctgatac tgctcacggt cgcgaagcgg
      361 cgcgtccgtc gcacccgcgc aaatacgggc ctggatactg gcctgacggg gggtgcaccc
      421 tggcccgcgt cgggctacca catgacgctg tgctcatcga gtggtgtctc gcaactgcgg
      481 cccagcgtgc gctatgcgtg cctaccacat gccgaaggcc ctttctctat tcgagaaagg
      541 gcctatcagc gccgaagtcc ggccctggcg accgcaccgg cacaccacct gaccccggca
      601 gaactggtat ggtgggtcaa ccccattgtg cgcgggtgga tgagctacta cggacggttc
      661 taccgctcag cgccatatcc gctgctgggc cgcatcaacc attacatgat gcggtagttg
      721 cgccgtaagt accggcgacg atagggataa actctgactt cctcgatgcg aacgagatcc
      781 ctcgtgtcgg ccgatgtggc ttggtgtcgc tggattcctg gtgaacggtc tgaatcgaac
      841 ggtgtagcag gctcaatgtg gccccgtgtc gaccgccgat ggctcccaac ttggctccca
      901 cgaccaacag gacgagatct agtttgctgc gctctatgtt ggttacctag caccggctcg
      961 acgttctggt aacagttctc gcccgcgata cgaaatcgcg ctaagtgaca ggtggactcg
     1021 gagagaatgc gcgccgagcc gccgctatgg gcggtcggca gctagacgtc aagcgcagca
     1081 cgggtcattc agatccggac gttatggtat tgggcactgg ctgatttcga ggactcgctt
     1141 ttcctgccct ctccggtaag ttcccggcga tccttatgag ggacgttatc cgccaattga
     1201 ccgggtctgc cggtgcgctc cccggcgcgg cgccgatagg aacggcgcat tcaaccacga
     1261 agtgctccgc gccgtgtggt agccgacgag taaccggtca ggcgagcacc catagctcgg
     1321 taaatggcgg ggtgatgtgc cagatcgtct caaggcccgc cggcagggaa gccaagtcgc
     1381 caggcttgag catcagcgtc gggccgccgg cgatctcgat ggccacctcg cc
//
LOCUS       DASRPQ010001423         1266 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3325555, whole genome shotgun sequence.
ACCESSION   DASRPQ010001423 DASRPQ010000000
VERSION     DASRPQ010001423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3325555"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..987)
                     /locus_tag="VFD73_16260"
     CDS             complement(<1..987)
                     /locus_tag="VFD73_16260"
                     /inference="COORDINATES: protein motif:HMM:NF013810.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75535.1"
                     /translation="MEGSIRQGSRFSRRGTLLLSLLWVIVDALAAPTSAHALVCGANN
                     GYFCQGTQTQYGGGFNPGVGYGGFGGGSCTATRTPVIFVHGNGDNAISFDMPPGAVAG
                     YGTPARSVYAELKARGYNDCELFGVTYLSPTEQGSAKDNYHSTSKYSTLKTFIDKVKT
                     YTGKSQVDIVAHSMGVSMSLATLQYYNTWSSVRKFINLGGGLRGLYSCYYTGYANAYA
                     PTCGSQNVFDSYIFGFFPEGWYYGVWVTNSWTGTGSTNSLRDMPGRHTGVTFYTLSAA
                     FKDQVGCATASFWVGCDQAARFTAAANVKAQINVGAGANAAQIDYDWQNGIPF"
BASE COUNT          240 a          395 c          397 g          234 t
ORIGIN      
        1 gaacgggatg ccattctgcc agtcgtaatc gatctgagcg gcgttggccc ccgctcccac
       61 gttgatctgc gccttcacgt tggcggcggc ggtgaacctg gcagcctggt cacagccaac
      121 ccagaacgag gccgtcgcgc acccgacctg atccttgaac gccgccgaca gggtgtagaa
      181 ggtgactccc gtatgtctgc ccggcatatc gcgcagcgag ttggtcgatc cggtgccggt
      241 ccagctgttg gtgacccaga ccccgtagta ccagccctcc ggaaagaaac cgaagatata
      301 gctgtcaaag acattctgcg aaccacacgt gggcgcgtac gcattggcgt aaccggtgta
      361 atagcagctg tacagcccgc ggagaccacc gccgaggttg atgaacttcc tgacgctgga
      421 ccatgtattg tagtactgaa gcgtggccag tgacatcgag acacccatgg agtgcgcgac
      481 gatatccact tgcgactttc cggtgtaggt cttcaccttg tcgatgaagg tcttgagggt
      541 gctgtacttg gaggtggagt gatagttgtc cttggccgat ccttgctcgg tgggcgagag
      601 ataggtcacg ccgaagagct cgcagtcgtt atagccacgc gccttcagct cggcgtagac
      661 cgagcgggca ggcgtcccgt accccgccac cgcgccgggc ggcatatcga agctgatcgc
      721 gttgtcgccg ttgccgtgga cgaagatgac cggcgtcctg gtcgcggtgc agctaccgcc
      781 gccgaacccg ccatacccga caccggggtt gaacccgccg ccgtactgag tctgcgtgcc
      841 ctggcagaaa tatccgttgt ttgcgccaca gaccagggca tgcgcgctcg tcggagccgc
      901 cagcgcatcc acgatcaccc agagcagcga tagcagcaga gtgccacgcc gcgaaaaccg
      961 ggagccttgt ctgatcgatc cttccatatc gccatctctt tccgctgcat tgcagcaatg
     1021 aacccgctgt gcgccgggac tgtcccgcgc ggcaggggcg ctcggaagcg cagaccgtcg
     1081 aaatcgtaca ccaccgggag tcaggcgaag cggccgggct ccggcgtgcc gagggtgtcg
     1141 gcaccgggcc gtcgaacagg ctgaagcagc accactgacc agcagtggcc tgaggcgttc
     1201 ttgttaaaag agccggtcgt gacgggcgat tcgcccgagg cacttctttc gtctggtgcc
     1261 agttca
//
LOCUS       DASRPQ010001424         2274 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1430077, whole genome shotgun sequence.
ACCESSION   DASRPQ010001424 DASRPQ010000000
VERSION     DASRPQ010001424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2274
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1430077"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(326..2035)
                     /locus_tag="VFD73_16265"
     CDS             complement(326..2035)
                     /locus_tag="VFD73_16265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012631283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
                     /protein_id="HZI75536.1"
                     /translation="MSLHPHVITPVPAETARVARAAFPKGHPYLTLRDALGTIFQDED
                     FTALFPAWGHPGLPPWRLALVTILQFRENLADRQAAEAVRARIDWKYLLSLDLTDPGF
                     DFSVLSEFRDRLLAGHAEELLLNKLLERCRALGLLKARGQQRTDSTHVLAAIRVLNRL
                     ELVAETLRAALNALATVAPAWLQGLAPLAWYERYGRRIEDTRLPREQAQRDAYAQTVG
                     EDGFHLLDVLDAPQAPTGLRELPLITTLRQTWQRHYERTARALVAPGEPPEYTVRFKA
                     SRELPPAAEGLESPYDVEARYRHKHDTQWTGYMVHVSETCEPTAPHLLIHVHTTPASV
                     HEAQCTEPIQQALIDKAVPPQEHFVDAAYISSELLVHSRDAQGIILRGPTRPSQGWQT
                     QVEGAYTLEQFEVDWDQQHVRCPQGHLSVAWWEHGGGQGSRPIIVAFDKQTCGTCPVR
                     PSCTRAKHTGRRLRLPPQDQYEALAAAQTWSASEEGQQLYKRRAGVEGTLSQGVRAFG
                     LRRTRYWGLAKTHVQHVAIAAAINLDRLVAWLDERPRALTRLSRFAALAPANADNLGE
                     AAA"
BASE COUNT          433 a          672 c          737 g          432 t
ORIGIN      
        1 ttgagactat cctcattatt gatttatata gccgtattta cagacagcaa tcacgcacag
       61 tggggtctca aaaatccggg ggatactgtt ggccaaccct gaaatgagtc tttattgtcc
      121 tatgctaggg ttcttagtag atcagaataa aacaaacaat gaggcttgca tggcaggagt
      181 gtatggccac tcagacgtct gccttaagac ctgtttgctg caaatctact acataaaata
      241 ttttatgtag tacaaaaaca cgtaaaagta ccgtcctcca gcatggcttg ccgggtagag
      301 aggacgcgag aacctcagcc gaatgtcagg cggctgcctc gccgagattg tccgcgtttg
      361 cgggcgccag agcggcaaag cgggagagcc gtgtcagggc ccgtgggcgc tcgtcgagcc
      421 acgcgaccag gcggtcgaga ttgatcgcgg cagcgatcgc gacgtgctgc acgtgggtct
      481 tcgccaggcc ccaatatcgg gtccgtcgga ggccaaaagc acggactccc tgggagaggg
      541 tcccttcgac gccggcccgt cgtttataga gctgctggcc ctcctcactg gccgaccagg
      601 tctgcgctgc tgccagtgcc tcgtactggt cctggggcgg gagccgcagg cgccggccag
      661 tgtgcttggc acgggtacag gagggtcgta cgggacacgt cccacaggtc tgtttgtcga
      721 aggccacaat gatagggcga ctgccctggc cacctccatg ctcccaccac gcgaccgaca
      781 ggtggccctg gggacagcgc acgtgctgct ggtcccagtc cacctcgaac tgctcgagcg
      841 tgtatgcacc ctcgacctgg gtttgccacc cctggctggg gcgtgtggga ccccgcagga
      901 tgatgccctg tgcgtcgcgg ctgtggacga gcaattccga gctgatataa gccgcatcca
      961 cgaagtgctc ctgcgggggc acagccttgt cgatgagggc ctgctggatg ggctccgtac
     1021 actgcgcctc atggacgctg gcgggggtcg tgtggacgtg gatgaggagg tgcggggcgg
     1081 tgggctcgca cgtttcgctg acgtgcacca tgtacccggt ccattgggtg tcgtgtttgt
     1141 ggcggtagcg cgcctcgaca tcgtagggcg attcgaggcc ctcggcggcc ggtggcaatt
     1201 cccggctcgc cttgaaacgc accgtatact cggggggctc tccaggggct accagcgcac
     1261 gcgctgtccg ctcgtagtgg cgctgccagg tctgacggag agtagttatg agaggtaact
     1321 cccgcaggcc cgtgggtgcc tgcggggcgt ccaggacgtc gaggagatgg aagccatcct
     1381 cgcccacggt ctgggcatag gcgtcgcgtt gcgcctgctc ccggggcagc cgtgtatcct
     1441 caatccgtcg gccataccgt tcataccagg ccagcggggc caggccttgg agccaggccg
     1501 gtgccacggt ggcgagggca ttgagggcgg cccgcaaggt ctcggcgacg agttccaagc
     1561 ggttgagcac ccggatggcg gccagcacat gggtcgagtc ggtgcgttgc tggccacgag
     1621 ccttgagcaa gcccagcgcc cggcagcgct ccaggagctt gttgaggagg agctcttcgg
     1681 cgtgccccgc cagcaggcgg tcccggaatt cactcaggac cgaaaagtcg aaccctggat
     1741 cggtcaggtc gagactcagc agatacttcc agtcgatgcg cgcgcggacc gcctccgccg
     1801 cctggcgatc ggccaggttc tcccgaaact gcaggatcgt caccaacgcc agccgccagg
     1861 ggggcaagcc cgggtggccc cacgccggga acaaggcggt aaagtcttca tcctgaaaga
     1921 tcgtgcccag ggcatcacgg agcgtcagat acggatggcc tttgggaaag gccgcccggg
     1981 ccacacgagc ggtttctgcc ggaacaggcg tgatgacgtg cgggtggagc gacatgcgag
     2041 acatccttct gcggagtggg tacaggcatc agagagatcg ggggctgtat tatgccatag
     2101 cccgctcccc agggatacct cgcaggtgag gaaacgcgta gcagatattt tttactacag
     2161 aaaatatttt ctgtagtaaa tttgatgtaa acgcctctca tcagacccct gccacaggca
     2221 cgagcgtcca tggcatatcc cctcaaaact ctccaccctg gtcgccacct ttta
//
LOCUS       DASRPQ010001425         1628 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_168912, whole genome shotgun sequence.
ACCESSION   DASRPQ010001425 DASRPQ010000000
VERSION     DASRPQ010001425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168912"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1628
                     /locus_tag="VFD73_16270"
     CDS             <1..>1628
                     /locus_tag="VFD73_16270"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HZI75537.1"
                     /translation="CDGLLYFVMPYAGCETLRDRLNREGSLPIDVALRITRAVAAALG
                     YAHRHQVIHRDIKPENILLQEGEPVVADFGVATAMSAAGGDNVYITDRGFAVGTPAYM
                     SPEQASAERDLDGRSDLYSLACVLYEMLSGRPPFAGSGARATMVRHAIEQPAPIRTLR
                     PTVPLALDLALQRALAKAPADRFATMDEFCEALATPGPAPVPVISGERRSIAVLPFVN
                     SSADPENEYFSDGMTDEMITALSKVEGLRVASRSSVFALKNLREDVRTLGGRLNVSTL
                     LEGSVRKSGNRIRVSVQLSNAADGSTLWSERYDRELADVFAVQDEIAGTIVRTLRSTL
                     LGDLGDLTPVRYTSNMKAYSLYLKGRFWWNRRSQEAIKEGIRYFEQAIQEDPGYALAY
                     SGLADSYALDLDYKGAPVFEGMERARAKAKKAIELDETLAEAHTSLGWVTFIFDWDWA
                     AADREFGRAIDLNPRYATARQWYSWFLAAMGRFDEGLAQGRMAMELDPASVSIRRSMG
                     WLLYYARQYDAALDELRRALTMNPTSEETHRLLG"
BASE COUNT          285 a          506 c          539 g          298 t
ORIGIN      
        1 agtgcgatgg tcttctctat ttcgtcatgc cgtatgccgg ctgcgagacg ctgcgcgacc
       61 ggctgaaccg ggaggggtcg ctccccatcg acgtggcgct tcggatcacc cgggccgttg
      121 ccgctgcgct gggctatgct caccggcatc aggtcattca ccgcgacatc aagccggaaa
      181 acatcctgct ccaagaaggt gagccggtcg tggccgactt cggagtggcg accgccatgt
      241 cggctgcagg cggtgacaac gtctacatca ccgatcgagg gtttgccgtc gggacgccgg
      301 cgtacatgag ccccgagcag gccagcgccg agcgggacct ggatgggaga agcgacctct
      361 acagtctggc ctgcgtgttg tacgagatgc tgagcggcag gcctcccttt gccggttccg
      421 gcgcacgcgc cacgatggtc cgtcatgcca tcgagcagcc ggcgcccatc agaacgctgc
      481 gtcccaccgt gccgctggcg ctggatctgg cattgcagcg cgcgctggcc aaggctcccg
      541 ccgatcggtt tgccacgatg gacgagttct gcgaggcact ggccaccccg gggcccgctc
      601 cggttccagt gatctcgggt gagaggcgga gcatcgcggt gcttccgttc gtgaactcca
      661 gcgccgaccc ggagaacgag tacttcagcg acgggatgac cgacgagatg atcacggcgc
      721 tatccaaggt ggagggcctc cgggttgcgt ctcggagctc cgtgttcgcg ctcaagaacc
      781 tgcgcgagga cgtccgaacg ctgggtggtc ggctcaacgt ctctaccctg ctggaaggat
      841 cggtgcggaa atcgggaaac cggatccggg tgagcgtaca gctcagcaat gcggccgatg
      901 gaagcaccct ctggtcggaa cgctatgacc gcgagctcgc ggacgtgttc gccgtacagg
      961 acgagattgc cgggaccatc gtccggacac tccgctccac cctcctcggt gacctgggtg
     1021 atctcacgcc ggttcgctac acctcgaaca tgaaggcata cagtctgtac ctgaagggac
     1081 ggttctggtg gaatcggcgg agtcaggagg ctataaagga agggatccgg tatttcgagc
     1141 aggcgattca ggaggatccg ggatacgcac tcgcctacag tggcctggcc gactcctacg
     1201 ctctcgatct ggactacaag ggcgcgcctg tcttcgaggg tatggagcgg gctcgcgcca
     1261 aagccaagaa ggctatcgaa ctcgacgaga cgctggcgga agcccacact tccctgggct
     1321 gggtcacgtt tatcttcgat tgggactggg ccgctgcgga tcgagagttc ggccgcgcca
     1381 tcgatctcaa tccgcgctat gccaccgctc ggcaatggta ctcctggttc ctggcggcga
     1441 tgggccggtt cgatgagggg ctagcgcagg gccggatggc tatggagctg gatcctgcgt
     1501 cggtctcgat ccgccgcagc atgggctggc ttctgtatta cgcccggcag tacgacgcgg
     1561 cgctcgatga actgcgtcgt gccctcacca tgaatcccac gtccgaagaa acccatcggc
     1621 tgctcggc
//
LOCUS       DASRPQ010001426         1713 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3928148, whole genome shotgun sequence.
ACCESSION   DASRPQ010001426 DASRPQ010000000
VERSION     DASRPQ010001426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3928148"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..223)
                     /locus_tag="VFD73_16275"
     CDS             complement(<1..223)
                     /locus_tag="VFD73_16275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75538.1"
                     /translation="MRQRAERSRINDEEVRAKAERIRDVQESSREGGLGARARDRVTR
                     GGPNTDSAGAKMAEDDWANQMERLEDKRAK"
     gene            complement(527..751)
                     /locus_tag="VFD73_16280"
     CDS             complement(527..751)
                     /locus_tag="VFD73_16280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75539.1"
                     /translation="MTGDGSNAKQLTYSEVRSRLSRRAAFEAHQEGTGKVPSYILHVR
                     PRYKGCEPFTLAGPDPADLLREALTRLEGA"
     gene            865..1296
                     /locus_tag="VFD73_16285"
     CDS             865..1296
                     /locus_tag="VFD73_16285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75540.1"
                     /translation="MSSPTAYAFDRQRIIVAEEDSVTSTLITRTLGRDGHCVSLDPVA
                     LSGASGLAHCHLLITSLRVDGVVRMDLLEEVREFWPDLPILFLVHEGPLPGNLPSLCV
                     PFTAEELQAAVRRLLPGLNSGTVLAREISASNTNPAGAIHG"
     gene            1507..>1713
                     /locus_tag="VFD73_16290"
     CDS             1507..>1713
                     /locus_tag="VFD73_16290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75541.1"
                     /translation="MREQGFPVDSTRYYAEEEVYAWRRELPGGSPTLWIARPVLEDHD
                     AEKVVAGLEQLGVADRMRRAPRARF"
BASE COUNT          264 a          563 c          531 g          355 t
ORIGIN      
        1 gcttggcccg cttgtcctcc aaccgctcca tttgattcgc ccagtcgtcc tccgccatct
       61 tcgcccccgc cgagtctgtg ttgggtccac cacgggttac tcggtcacgg gcccgcgccc
      121 cgaggccgcc ctcgcggctg ctctcctgca cgtcccggat ccgctcggcc ttggcgcgga
      181 cctcctcatc attgatccgc gaccgctcag cgcgctggcg caagtcctcg cggatccgcc
      241 ggccttactc ggcttggcgg cgatggagtt caacgtcttc catgcggcgc tgggccgcat
      301 tgtacttggt ttcggagttc ttggtgatga ggaacccacg gtttggagcc aactgcaact
      361 gctacctgga ggtatccaag tgtaggggcc tgggttcgag gcgcttccta cctgcaacat
      421 ggtcgggcct tcctgcgctg ccatagtccg cagtagtcgg gtggccgggg tctaagcatg
      481 gaccgggcca ttgggaggcc gtcctccgca caagtaagcc tggtgctcac gccccttcga
      541 gacgggtgag agcttcgcgc agcaggtccg cgggatcagg gccggctaaa gtgaagggct
      601 cgcagccttt gtagcgcggc ctcacgtgaa ggatgtagga aggcaccttt ccggtgccct
      661 cctggtgggc ctcaaaggcc gcgcgacggc tcaaccgcga ccgcacttcg ctgtaggtaa
      721 gctgtttcgc gttgcttccg tcacctgtca taccagcgaa gttagctcac cgtgccatcc
      781 cacgacagcg accagggtat attggtatag cattttcctt ccgacctgcc actctcgggc
      841 cctttgcccg ggcgaaggtt taccgtgagt tcccccaccg cctacgcctt cgatcggcaa
      901 cgcatcatcg tcgccgagga agactctgtc acctcgacgc tcattacccg cacgctgggc
      961 cgggacggtc attgcgtttc gctcgatcct gtcgcgctat cgggcgccag tgggctcgcc
     1021 cactgccacc ttctcattac cagccttcgc gtcgacggcg tcgtgcggat ggacctgctc
     1081 gaagaggtgc gagagttctg gcctgatctc ccgatcttgt tcttggttca cgagggtccg
     1141 ttgcccggca atcttccctc cctgtgtgtg cctttcaccg ctgaggagct gcaggccgcc
     1201 gtgcggcgac tcttaccggg gctcaattcc ggcaccgttc tggcccgcga gatctccgct
     1261 tcgaacacca accccgcggg agctatccat gggtgacatc agcctcctcg tagccttgat
     1321 ttcactgctc gcgataaccc tagctgtcgt tctgagcttg cgtggctggc gccaacgacg
     1381 ccgggaagcg tgggaggtgg atcgagccgc gtggcgagcc tggatcatcc gaccgtgaaa
     1441 agcccgacga ctccaccgtc cccatggaaa cctgcagcgc agacggacag tgcggtgcgg
     1501 ggatggatga gagagcaggg attccccgtg gactccacgc gctactacgc cgaagaagaa
     1561 gtctatgcgt ggcggcggga gttgcccggg gggtccccca ccctgtggat tgcccgaccg
     1621 gtgctcgagg atcacgatgc tgagaaggtg gtggccggcc ttgagcaact tggagtggca
     1681 gatcggatgc gtagggcccc gagggctcgc ttc
//
LOCUS       DASRPQ010001427         1511 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3631616, whole genome shotgun sequence.
ACCESSION   DASRPQ010001427 DASRPQ010000000
VERSION     DASRPQ010001427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3631616"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1263)
                     /locus_tag="VFD73_16295"
     CDS             complement(<1..1263)
                     /locus_tag="VFD73_16295"
                     /inference="COORDINATES: protein motif:HMM:NF014759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease H3TH domain-containing
                     protein"
                     /protein_id="HZI75542.1"
                     /translation="MPNHTPPQLFLIDGYALIYRAFYAMISRPLRTAKGENTSAAWGV
                     VNFLLRLREKYRPDYVAWINDAGTSFREQRFAEYKSTRQKLDQELQADFNRSVERICQ
                     LLEAFGVPIIAIRGYEADDVIGTLAHAASNRGLQAVIVSGDKDFYQLVGPGIALLNPG
                     RGGPAAVDEIWVDESNAAERLGVPPRQVVDFLALVGDSSDNIPGVKGIGEKGAQKLLA
                     EFGDLETMLARAGEVTAKRPREALLSQAENARLSRELVTIKRDVPVELNMSELVLHEP
                     DRDTVIRLLTELEFYSLVRRLTDNSAAADNSGPSPVAATDGETSELDFSADAWLTLSD
                     LSGPTAPTVTVVDNTADIPAVIQRLREAPLIGIDVEASSFEPHDAELVGLSLAASPDE
                     VWYFPFGHRPSGGELAAPTPVRNLPPLAT"
     gene            complement(1314..>1511)
                     /locus_tag="VFD73_16300"
     CDS             complement(1314..>1511)
                     /locus_tag="VFD73_16300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75543.1"
                     /translation="FITLGPPDESIESTPGTAGRIVRWSYLNYRLALFFQDETGFGRL
                     RLTPGSRAEYERTLNRIRRQT"
BASE COUNT          311 a          447 c          488 g          265 t
ORIGIN      
        1 ggtggcgaga ggcgggaggt ttcgcaccgg agtgggtgcg gcaagctcgc ccccggaggg
       61 acggtgaccg aaggggaagt accagacttc gtcggggctc gcggccaggg agagacccac
      121 cagctcggca tcgtggggct cgaaagagga tgcctcgaca tcgataccga tcaggggagc
      181 ttcccgcaaa cgctggatca ctgcaggaat gtccgcggta ttgtcaacga ccgtaactgt
      241 gggggctgtt ggcccggaga ggtcggagag agtgagccag gcatcggctg aaaaatccag
      301 ctccgaggtc tcgccgtcgg tagcagcaac cggcgagggc ccggagttgt ccgccgcggc
      361 ggaattatcg gtgagacggc gaaccaggga gtagaactcg agctcagtca acaggcggat
      421 gacagtgtcg cgatccggtt cgtgaaggac caattcgctc atgttgagct cgaccggaac
      481 atcgcgtttg atggtgacga gctcccggga gaggcgggca ttctccgcct ggctcaacaa
      541 ggcctccctc ggccgtttgg ccgtaacctc accagcacgg gccagcatcg tctcgaggtc
      601 accgaactca gccaggagct tctgggcacc cttttctccg atgcctttca cgccggggat
      661 gttatcagag gaatctccca ccagggccag aaaatcgacc acctgccgcg gcggcactcc
      721 gaggcgctcg gcggcgttcg actcatccac ccagatctcg tccaccgcgg cgggccctcc
      781 tcggcccggg ttcagcaagg caataccggg cccaaccaac tggtaaaaat ccttgtcgcc
      841 ggaaacgatg actgcctgga ggccgcgatt ggaagcagcg tgagccagcg ttccgatcac
      901 atcatcggcc tcgtagcctc gaatggcgat gatcgggacc ccgaacgcct ccagcaactg
      961 gcagattcgt tccaccgagc gattgaagtc ggcctgaagc tcctggtcca gcttctgccg
     1021 ggtggacttg tactcggcaa agcgctgctc ccgaaacgag gtgcccgcgt cattgatcca
     1081 cgcgacatag tcgggccggt acttttcgcg caggcggagc agaaagttga ccacccccca
     1141 cgccgcagac gtattctcgc cctttgctgt ccgaagcggc cgcgaaatca tggcgtagaa
     1201 cgcgcgataa atcagcgcgt acccgtcgat gagaaagagc tgcggcggag tgtggttggg
     1261 catggatgga aaataaggcg ggaaaactcg aacagcggcg ctgcgttccc gttttacgtc
     1321 tggcgccgaa tgcgattcag ggtccgctcg tactcggctc gggaacccgg cgttaggcgc
     1381 agacggccga atccggtctc atcctggaag aagagtgcaa gtcggtaatt gaggtagctc
     1441 cagcgaacga ttcgtccggc agtgccggga gtactttcga tactctcgtc cgggggtcct
     1501 aaagtgataa a
//
LOCUS       DASRPQ010001428         1031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3327087, whole genome shotgun sequence.
ACCESSION   DASRPQ010001428 DASRPQ010000000
VERSION     DASRPQ010001428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3327087"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..562
                     /locus_tag="VFD73_16305"
     CDS             <1..562
                     /locus_tag="VFD73_16305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75544.1"
                     /translation="ERVPDLTDHDEPAAMSPHPVSGPDRPEQSPASGDRATTETAAAQ
                     PEDAMVTEARRLFGPPPTTNANVAGPVRTGLPLPFMNGGSRCAWSGEEAKAVERPANG
                     VIEGIVRTESSGRPIPGAFLQMLGTGSATFADETGHYRLTFDPSLVDVCRSQLVRVTA
                     PGYRARTMILTLGPPSDNIVDLSGRP"
     gene            788..>1031
                     /locus_tag="VFD73_16310"
     CDS             788..>1031
                     /locus_tag="VFD73_16310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75545.1"
                     /translation="MSQPLSEIPKPYFGGRSRRFRSTELHQAFQGVKRRAQQSAQSVI
                     RRVKRNPRTFGLAGGAVVLTLAGAYSLSASGAGRSLC"
BASE COUNT          189 a          334 c          312 g          196 t
ORIGIN      
        1 ggagagagtg ccggatttga ccgatcatga tgagcccgct gccatgagcc ctcatccggt
       61 cagcgggccg gatcgacccg agcagtctcc ggcatcaggt gatcgcgcaa cgacagagac
      121 ggctgcggcc cagcctgaag acgcgatggt gaccgaggcc cgccggctct tcggtccccc
      181 gcccacgacc aacgcgaacg tggccggacc ggtccgaacc ggtcttccgc ttcctttcat
      241 gaatgggggt tcgcgctgcg cctggagcgg cgaagaggcg aaggccgttg aacgcccggc
      301 caatggcgtg atcgagggga tcgtccgcac cgagtcgagc ggccgaccga ttcccggcgc
      361 atttctccag atgctgggca ccggatccgc caccttcgcc gacgaaaccg gtcactatcg
      421 gctgaccttc gatccctctt tggtggatgt ctgccgcagt cagctggtaa gagtcaccgc
      481 tccaggctat cgggcccgga cgatgattct cactctggga cctccgtccg acaacatcgt
      541 cgatctctcg ggccggccgt aacgatccgc tgctttactg cgttgcagat tgcccggtga
      601 gaagcaacgt tcagtggccg cctcatgctc tcggtatcac tcgcttcatt ggttcattct
      661 atatggttgg cagtcaatcg atttgccagc tgcagcgatt gacacgctga gatcgctgga
      721 atttcacgat ccttgctcca gatctccgtt ccgcaccggc gcgaccccag gaaccggaga
      781 cctaacgatg agccaaccac tctcggaaat tcccaagccg tacttcggag gccgcagtcg
      841 acgttttcgc tcgaccgagc tgcaccaggc attccaagga gtcaaacgca gggcccagca
      901 gtcggctcaa agcgtgatcc ggcgggtgaa aaggaacccg cgcaccttcg gactggccgg
      961 tggtgcagtc gtcctgacac tggcgggcgc ctacagcctg agtgcctcgg gagctggacg
     1021 gtcgttgtgt c
//
LOCUS       DASRPQ010001429         1057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3327101, whole genome shotgun sequence.
ACCESSION   DASRPQ010001429 DASRPQ010000000
VERSION     DASRPQ010001429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3327101"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..584
                     /locus_tag="VFD73_16315"
     CDS             <1..584
                     /locus_tag="VFD73_16315"
                     /inference="COORDINATES: protein motif:HMM:NF036525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HZI75546.1"
                     /translation="LTSESPALARAVEAAVGLFSRKGYASTSTREVAKLLGIQKATLY
                     YHVESKEDLLFLICQFSLTQIRTDVETAIQDCSDPIERVQALVSAHIESLLRDEAEHS
                     SAFTEMHALSEQRFREIMELRDTYERRVRAVLQEAQDAGVLRRDISAKYLSLALLGIM
                     NRVMVWYRRDGALTPAQIGRLMGGLFLSGAASK"
     gene            663..953
                     /locus_tag="VFD73_16320"
     CDS             663..953
                     /locus_tag="VFD73_16320"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HZI75547.1"
                     /translation="MIDRRFDIRIPRADALMLSWTDQAGQKHQNPAHLVDVSASGASI
                     RLQHPIRVGTTLSFGFDDKEFSGRVTHCVAQNLGYTLGVEFLAGYRWSPRLD"
BASE COUNT          208 a          352 c          305 g          192 t
ORIGIN      
        1 ccctgacctc ggaaagcccc gcactggctc gcgccgtgga ggccgccgtc ggactcttct
       61 cgcgcaaggg ctatgcctcc accagcacgc gggaagtggc caagctcctc ggtattcaaa
      121 aggccaccct gtattatcac gtcgagagca aagaggatct gctgttcctc atctgccagt
      181 tctcactcac tcagatccgg accgacgtgg agaccgcgat ccaggactgt tccgacccca
      241 tcgaacgcgt ccaggccctg gtcagcgccc acatcgaaag cctgctgcgc gatgaagccg
      301 agcattcttc cgccttcacc gaaatgcacg ccctgtccga acagcgcttc cgggaaatca
      361 tggagctgcg cgatacctat gagcgccggg tacgcgccgt cctgcaggaa gcccaggacg
      421 ccggcgtact gcggcgggac atcagcgcga aatatctgtc cctggccctg ctggggatca
      481 tgaaccgggt aatggtctgg taccggcgcg acggagcgct gacgccggcc cagatcggga
      541 ggctgatggg cgggctcttc ctcagcggag cagcctcaaa ataacacttt caccgccggg
      601 aacttgaccg tgggcggcac ggcctaaatt tctcaaacgc ttcggccgat agagcgtctg
      661 tcatgatcga tcgacgattt gacatccgga tcccccgcgc cgacgctctc atgctgagct
      721 ggaccgatca ggccggccag aaacaccaga atccagccca tctggtggat gtttccgcat
      781 cgggggcttc catccggttg cagcatccga tccgtgtggg caccactctc tcgttcggct
      841 tcgacgataa ggaattttca ggtagagtta cccactgcgt cgcgcagaac ctgggataca
      901 ctctaggagt cgagttcctg gcgggctacc gctggtcgcc gcgcctggat tgagcgaaga
      961 ggctcttcgc cgcgttgagc gccagcaggc acagcccagc cacagcgacc gacaataccc
     1021 agcgctcggg ttcccgccca tgccggatta actccac
//
LOCUS       DASRPQ010001430         1035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4559862, whole genome shotgun sequence.
ACCESSION   DASRPQ010001430 DASRPQ010000000
VERSION     DASRPQ010001430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4559862"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            186..>1035
                     /locus_tag="VFD73_16325"
     CDS             186..>1035
                     /locus_tag="VFD73_16325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75548.1"
                     /translation="MPTTGIVSIFREAYYSVNRRRRRRSGSTSTRYKASELVPARRTR
                     LSTTDLVVNGAVAVVALALVALIWMVTDRAVQDQSVEIRERAEQALTSQAATIAETVA
                     HELQMIDQSLSIIQDAWKQNSDAVNLVAWRDKLPALTAVSEDVFISDEQHVIRQDIIP
                     QAVGQGVGAAYIRLPSGALEALEPDGTRTKDSMVVQKQPGAPVETRQYLMYAIRPLDH
                     PKGWLLGASYRSAELTRLFAQAALGYNPVVALTDTGHGSVQAVVGPAARRANIDISTT
                     PFYEAMS"
BASE COUNT          195 a          332 c          316 g          192 t
ORIGIN      
        1 agggcagtaa atcaacgtgt tatacggttc ccgagaaagc atgacgcttt tctgaccgcc
       61 tgacccggcc atcccctcgg tttgcaggta actggaaccg tcatcatttc ccgggatccg
      121 tattatacgg ttcccgagaa agcttgacgc ttttccgacc gcctgaccca gccatccaac
      181 tcggtttgcc gacaaccgga atcgtcagca ttttccggga agcgtattac agcgtcaatc
      241 gccgccggcg tcgccggagt ggctccacct caacgcggta caaggcttcg gagctcgttc
      301 cagcccggcg tacccggctc agcacaaccg atctcgtcgt caacggtgcc gtcgcggtcg
      361 tcgcattggc tctggtggct ttgatctgga tggtcaccga ccgcgccgtc caggatcaga
      421 gcgtggaaat ccgcgaacgg gccgagcagg ccctgaccag ccaggccgcc accattgccg
      481 agaccgtggc gcatgagctc cagatgatcg accagagcct gtcgatcatc caggatgcct
      541 ggaagcagaa cagcgatgcg gtgaacctgg tggcctggcg ggacaagctg cccgctctga
      601 cagccgtttc cgaggacgtg ttcatcagcg atgagcagca cgtcatccgc caggacatca
      661 tcccgcaggc tgtcgggcag ggagtcggtg ccgcctatat ccggctgccc agcggtgctc
      721 tcgaggccct ggagccggat ggcacaagga ccaaggactc gatggtggtc cagaagcagc
      781 cgggagcgcc ggtcgaaacg cgacaatacc tgatgtatgc cattcggccg ctggaccacc
      841 cgaagggttg gcttcttggt gcctcctacc ggtccgcgga gctgaccagg ctgttcgcgc
      901 aggccgcgct tggctacaac cctgtggtcg ccctgaccga caccgggcat gggagcgtgc
      961 aggccgttgt cggtccggct gcccgccggg cgaatatcga tatttcgacg acgccgtttt
     1021 acgaagccat gagcc
//
LOCUS       DASRPQ010001431         2015 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3928605, whole genome shotgun sequence.
ACCESSION   DASRPQ010001431 DASRPQ010000000
VERSION     DASRPQ010001431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2015
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3928605"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1023)
                     /locus_tag="VFD73_16330"
     CDS             complement(<1..1023)
                     /locus_tag="VFD73_16330"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI75549.1"
                     /translation="MSTLQEQLQRALASTYVIERELGGGGMSRVYLAHETALGRKVAV
                     KVLLPELAAGVNIERFRREILLAAQLQHPHIVPLLAAGEAEGLPYLIMPYVSGESLRA
                     RVTREGELPIAETVRILRDVVSALAYAHSYGVVHRDVKPDNVLLSGGVAVVTDFGVAK
                     AVSASADTGATGLTSMGVALGTPAYMAPEQATANPHTDHRADLYALGVTAYELLTGAP
                     PFAGRPPQAVLAAHVIEEPEPVERRRGAVPPPLAELVRACLAKRPADRPQSAAQVMHL
                     LDSIATPSGGTAATTAVRVPAVPPTPATRRLWPVAAAALVVIAGVVAGAVLLRREGSP
                     PPAAIIP"
     gene            complement(1049..1705)
                     /locus_tag="VFD73_16335"
     CDS             complement(1049..1705)
                     /locus_tag="VFD73_16335"
                     /inference="COORDINATES: protein motif:HMM:NF015747.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HZI75550.1"
                     /translation="MASSQPKRFGVLGSGEVGQSLAKGLAANGYEARIGSRSPAKLAK
                     FSKSAGIPAGTFSEVAAWGDAAVLAVLGTAALEVIQQSGPTNLRGKLVIDTTNPISNE
                     APVDGVLRYFTGPNESLMERLQATYPEVAFVKAFNSVGSGLMVHPMLSGGPPTMFYCG
                     NDAGAKAVVNRLLEHLGWEGADMGTAVAARALEPLAQLWCIPGFRENDWMHAFRMLRP
                     "
     gene            complement(1748..>2015)
                     /locus_tag="VFD73_16340"
     CDS             complement(1748..>2015)
                     /locus_tag="VFD73_16340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75551.1"
                     /translation="AESSSGEQLGLAVTAILMAVAIASWIYGIYCYIQMVRHRRPGVP
                     PLSMMWPAQFLTERGREFRRRALLSYGVFAALGLLLILWGWLQR"
BASE COUNT          363 a          675 c          663 g          314 t
ORIGIN      
        1 gggaatgatt gccgcggggg gcggagagcc ctcacggcgc agcagcacgg cacctgcgac
       61 gacacctgct atgacgacga gcgcggctgc ggccaccggc cagagtcggc gggttgcggg
      121 ggtaggtggg acagccggca ctcgcactgc cgtcgttgcc gcagtcccgc cactcggcgt
      181 cgcgatggaa tccagcaggt gcatcacctg ggcggcgctt tgaggccggt ctgcgggccg
      241 ctttgccagg caggcacgca ccagttcggc cagcggcggg ggaaccgcgc cacgacgacg
      301 ctccaccggc tccggctctt cgatcacgtg ggcagcaagg actgcctgag gtgggcgtcc
      361 ggcaaacggc ggagcgccgg tgagcagctc gtaggccgtg accccgaggg cgtagagatc
      421 ggcccgatgg tcggtgtggg gattggccgt ggcctgttcc ggcgccatgt acgccggcgt
      481 gcccagcgca actcccatgg aggtgaggcc ggtcgcgccg gtatcggctg aggcgcttac
      541 cgctttggcc acaccgaaat cggtgacgac cgcgactccg ccggacagca gcacattatc
      601 aggcttcacg tcccggtgaa ccacgccgta ggaatgagcg taggcgagcg ccgacaccac
      661 atcgcgcagg atgcgcaccg tctccgcaat gggcagctcg ccctcacggg tgacgcgcgc
      721 ccgtagcgac tcaccgctga catacggcat gatgaggtaa gggagaccct cggcttcgcc
      781 ggcagcaagc agcggaacga tgtggggatg ctgcagctga gcagccagga ggatctcccg
      841 ccggaaccgc tcgatgttga caccggcggc aagctcaggg agcaggacct tgaccgccac
      901 tttgcggccc agcgcagtct cgtgcgccag gtagacccgc gacatgccac cgccgcccaa
      961 ctcgcgttca atgacgtaag tcgacgccag agcgcgctgg agctgttcct gaagtgtgct
     1021 caccggaccg gctgtgcctc gctcgtcatc aggggcggag catgcgaaac gcgtgcatcc
     1081 agtcgttctc ccggaatccc ggaatacacc agagctgcgc cagtggctcc agtgcccgtg
     1141 ctgccacggc cgttcccata tcggctccct cccacccgag gtgctccaac aggcggttca
     1201 caaccgcctt ggcgccagcg tcgttgccgc agtagaacat ggtcggtggt ccgccggaaa
     1261 gcatcgggtg caccatcagc ccgctcccta cgctattgaa ggctttgacg aaggcgacct
     1321 cgggatacgt ggcctgcagc cgttccatca gcgactcgtt gggcccggtg aaatagcgga
     1381 gcaccccgtc caccggcgcc tcgttgctga tgggattggt ggtgtcgatc accagctttc
     1441 ccctgaggtt cgtcgggccg gactgctgga tgacttcgag agcggcggtt ccaagcaccg
     1501 ccagaacggc ggcgtctccc caggctgcga cctcggagaa ggtcccggct gggatgccgg
     1561 cactcttgga gaacttggcc aacttggcag gtgatcggct gccaatgcgc gcctcgtaac
     1621 cgttggcggc gaggcctttc gccagcgact gtcccacctc gcccgatccc aggacgccga
     1681 agcgcttcgg ctgagaggaa gccatgaatt ctccagtgtt ggtaccgtgc gtacggcacc
     1741 ggttcatcta acgctgcagc cacccccaca ggatgagcag taacccgagg gcggcaaaga
     1801 cgccatagct caacagcgct cgccgccgga actcacgccc gcgctccgtc agaaactgcg
     1861 ccggccacat catggacagc ggcggcacac ccggtcggcg atgccgaacc atttggatgt
     1921 agcagtagat cccatagatc caagaggcga ttgcgacagc catcaggatc gccgtcaccg
     1981 cgagcccaag ctgctccccg gaagacgact cggct
//
LOCUS       DASRPQ010001432         1164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3928717, whole genome shotgun sequence.
ACCESSION   DASRPQ010001432 DASRPQ010000000
VERSION     DASRPQ010001432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3928717"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..511
                     /locus_tag="VFD73_16345"
     CDS             <1..511
                     /locus_tag="VFD73_16345"
                     /inference="COORDINATES: protein motif:HMM:NF022589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GAP family protein"
                     /protein_id="HZI75552.1"
                     /translation="DAIKAQGKMSAGVDLALGLLLLAAGALLATGRLHGRRKAPVPAG
                     DAQPGQPQKKDGWAQRMLAEPRFGLAMLVGALIGIPGASYLTALHNLVTGKSSTATQV
                     IAVVVFVLIDFLLIIIPFAFLELRPEATKALLKHTQDWLLGHAARLMAAIALLLGAYL
                     AVSGLVRLS"
     gene            complement(527..763)
                     /locus_tag="VFD73_16350"
     CDS             complement(527..763)
                     /locus_tag="VFD73_16350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75553.1"
                     /translation="MPSRTYEITFAGQADSVARAEFDDCEVSVGPDTTTLLRELPDQG
                     ALHGLIQRIADLGLELIDVSVVAPPADVRHETST"
BASE COUNT          188 a          375 c          384 g          217 t
ORIGIN      
        1 cgatgccatc aaggcccagg gcaagatgag cgcgggcgtt gacctggccc tcggcctgct
       61 actgctcgcc gccggagcgc tgctggcaac gggccgcctg catggccggc gcaaagcccc
      121 agtcccggcg ggagacgcgc aaccggggca gccgcagaag aaggacggct gggcgcagcg
      181 gatgctggct gagcccaggt tcgggcttgc catgctcgtc ggtgcgctga tcggcattcc
      241 tggcgccagc tacctcactg cgctgcacaa cctggtcacc gggaaatcct ccaccgcgac
      301 ccaggtgatc gccgtcgtcg tcttcgttct catcgacttc ttgctgatca tcatcccgtt
      361 cgcgttccta gagctcaggc ctgaggccac caaggcgctg ctcaagcaca cccaggactg
      421 gctgctgggc cacgccgcac ggctcatggc cgccatcgcc ctgctcctgg gtgcctacct
      481 tgccgtcagc ggcctggtcc ggctgagctg attacctcgg tcatcatcat gtggaagtct
      541 catggcggac gtcagcaggc ggggccacga cgcttacgtc gatcagttcg aggccgagat
      601 cggcgatccg ctgtattagt ccgtggaggg cgccctgatc tgggagttca cgaagaagcg
      661 tggtcgtgtc gggccccacg ctgacctcgc agtcgtcgaa ttccgcccgg gcaacggaat
      721 ccgcctggcc ggcgaaagtg atttcgtacg ttcgtgatgg cactagcttg ccacctccgc
      781 agcctgatcc gagtctcgcg tggttcgaat atgtatggtg tgcgcgattg cgtcgtcacc
      841 tttcaagggc gatccgcgcg atattgacgt ggccgggccc accgttgccg tcatgatcgc
      901 ctaccctgtt ggcaccgcac tgcccgggag cggagcttgc ttaatcgcgg attgtgctgc
      961 gaagatgaaa tcttggatgc tgctccagac cccggcggta aggaattact cgccctgggg
     1021 ggtgaatgaa cctcgaagac agcggggcgg cggacgccag ccgatcggcc ggcctcttga
     1081 gggctgtcct tgtgggcccg ggattgagtc atggccacgg cccgggccag agccctgagc
     1141 cgggacgcag cgagcggtga cgga
//
LOCUS       DASRPQ010001433         1112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3327598, whole genome shotgun sequence.
ACCESSION   DASRPQ010001433 DASRPQ010000000
VERSION     DASRPQ010001433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3327598"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1060)
                     /locus_tag="VFD73_16355"
     CDS             complement(<1..1060)
                     /locus_tag="VFD73_16355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75554.1"
                     /translation="MLGDLSAANPKQLGWRLLGASGCCEYEFDMTLDEVWAGFGNAGS
                     GSLSGRVLDLKRPLMLPAQDNRFIAVKRVFPEARERTGLDPALLAWLVSPEHRLFHQL
                     WHASRDKWHKLSEDQRGALRGIGWQPGPRDRERDARGPRKDRNGSGVDFFFMHRHMLG
                     TARSMQDLPSWTHFPLPQPELARDRPGFARYFDNHDGTALPPTWLAEDDDEYTQWVSD
                     IKTGETYHSNFQVWESRYRDPRYLSQLTLGQFGSEVELGLHDWLHMRWASVPRDPSNG
                     QPVPFARDPADFSARWFAPENDFLGDPFSSHVSPVFWHFHGWIDDRLEDWFRAHERFH
                     PGQVRRLQVNGVPWFAPGR"
BASE COUNT          212 a          365 c          362 g          173 t
ORIGIN      
        1 agcgccccgg cgcaaaccag ggcacgccat tgacctgaag ccgacggacc tgccccggat
       61 ggaagcgctc gtgggcgcgg aaccagtcct ccaggcgatc atcgatccag ccgtggaaat
      121 gccagaacac cgggctcaca tgggaagaaa acgggtcgcc gagaaaatcg ttttccggtg
      181 caaaccagcg tgcggaaaag tccgccggat cccgggcgaa cggcaccggc tgaccgttgg
      241 acggatcacg cggcaccgaa gcccagcgca tgtgcaacca gtcgtgcaag cccagttcaa
      301 cctccgaacc gaactggccg agggtcagct gcgacagata acgcgggtcg cggtagcgcg
      361 attcccagac ctggaaattg ctgtgatacg tctcgccggt cttgatgtcg ctgacccatt
      421 gcgtgtactc gtcatcgtcc tcggccagcc aggtcggcgg cagcgctgtg ccgtcgtgat
      481 tgtcgaagta acgcgcaaaa ccgggccggt cccgcgccag ttccggctgt ggcaacggga
      541 aatgcgtcca ggacggcaag tcctgcatcg aacgcgccgt gccgagcatg tgccggtgca
      601 tgaagaaaaa gtccacgccc gaaccattgc gatccttgcg cgggccacgg gcgtcgcgct
      661 ccctgtccct tgggccgggc tgccagccga tgccgcgcaa ggcaccgcgc tggtcttcgg
      721 acagcttgtg ccacttgtcc cgggaggcat gccagagctg gtggaacaat cggtgctccg
      781 gcgataccag ccaggccagc agggccggat cgaggccggt gcgctcgcgg gcttcaggga
      841 agacccgttt gacggcaatg aatcgattgt cctgggcagg cagcatcaac ggccgcttca
      901 ggtccagcac gcgcccgctg agactgccgc tgccggcgtt gccgaagccg gcccagacct
      961 cgtccagggt catgtcgaac tcgtactcgc agcagccgct ggcacccagc agtcgccaac
     1021 ccagctgctt cgggttggcc gcggacagat cgcccagcac ccggtaacgg ggctcttgcg
     1081 tggagcgcaa tcgctcggcg gtgtcgagat at
//
LOCUS       DASRPQ010001434         1155 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2703881, whole genome shotgun sequence.
ACCESSION   DASRPQ010001434 DASRPQ010000000
VERSION     DASRPQ010001434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2703881"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            737..>1155
                     /locus_tag="VFD73_16360"
     CDS             737..>1155
                     /locus_tag="VFD73_16360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75555.1"
                     /translation="MQNAEAVLAVLRERGRKGLPCDELYRQMFNKSLYLLAYGRIYSN
                     QGAMTPGACEETADGMSEAKIDQIVAAMRGERYRFAPVRRVYIPKKNGKLRPLGLPSW
                     SDKLVGEVVRLLLEAYYEPMFSDHSHGFRKGRGCHTAL"
BASE COUNT          232 a          324 c          406 g          193 t
ORIGIN      
        1 caatccagat ggtgccgctc gaatattgag ttacgtggcc tgagctgggg ttacgcggcg
       61 tggtgatact cgttgatcag gcccgtgacg acgggttttc ggcggacgga tcgcaggtcg
      121 gccatgtcca ggacaggctg cgcctcccta tccgggggcc gctgccgccg ggactggtgc
      181 ggcctgtggc cgttgtaact gcgccacgag gcgcagcgtt gtatcgcccg cgtagcgggc
      241 agggacgaga ggagatgtct ctggatctga tggctgaccc gtgacccgaa agggtgaatg
      301 ggaaaaatag catgccagga aaccggtggc cgtgtccagg cgtagggagc ggcgcgccgg
      361 gggatccgcg tgatatggcg aaagctggat tgccttaagc ccagtctcca gaaggtgcaa
      421 acgtcacgcc taccggaaag acgcctgaaa ccggtaccgg cccctgcggc agggtcacta
      481 caaacctgcc gtaatcctcc ggggcgctgg agcgatgccc tgtccgggta ttgaaggaga
      541 cgaacgggac gcctaagtcg cgctgatgta caacgctgat gaacgtggga tcgcctacgg
      601 ggcgcgagcc ctatggcgac agagtgcccg tagtagtcgc aggggtaacg tcctgccaat
      661 ctggagaccg ggagagccgg accacagggc aaaggggcac aggtgacgga cgttaaggaa
      721 ccgtgaggta tgcgtaatgc agaacgccga ggcggtactt gctgtcctcc gtgagcgcgg
      781 caggaaagga ctgccgtgtg acgagctcta tcgacagatg ttcaacaaga gcctgtactt
      841 gctggcctac ggccgcatct actccaacca gggggcgatg acgcccgggg cctgcgaaga
      901 gaccgcagac ggcatgtccg aggcgaagat cgaccagatc gtcgcggcca tgcgcggcga
      961 gcggtaccgg ttcgcgccgg tgcgccgcgt gtacatcccg aagaagaacg ggaaactgcg
     1021 gccgctcggc ttgccgtcat ggtcagataa gctcgtcggc gaagtagtgc ggctcctgct
     1081 ggaggcgtac tacgaaccga tgttctctga ccactcgcac ggtttccgga aagggcgggg
     1141 ctgtcacacc gcgct
//
LOCUS       DASRPQ010001435         1362 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4560411, whole genome shotgun sequence.
ACCESSION   DASRPQ010001435 DASRPQ010000000
VERSION     DASRPQ010001435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1362
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4560411"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(896..1177)
                     /locus_tag="VFD73_16365"
     CDS             complement(896..1177)
                     /locus_tag="VFD73_16365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75556.1"
                     /translation="MPRYFFHLLDGKHSVLDEDGKELESLYEGHLHALRMFEKLIWFI
                     PDGLSPTCQIRITSGAGEPVLTVFLPALASEERFRRVAGAQASTHRGPR"
BASE COUNT          292 a          419 c          414 g          237 t
ORIGIN      
        1 cgccgggctt cggtcccgca gagcgggcag gctgccgggc gagcggccgg cctggtcgtg
       61 acgacgaggg cgtcgtcctc ttcggtcatg ctctcggcga ccaaaccgcc ggggatcaga
      121 gatgagatgt cgaccttcgc tcgcatcgcg atgctcccca ccaaaccagg ggagatcgcg
      181 cgtgaacgtc atcagaaatg agtcagagcc ccagttggac gccgatccac agtcctggat
      241 cagcccgctc gagaacaggt cgtattccgc aatgcgccaa gccgcatgcg ccggggccat
      301 gctctcgaag tcagcgacgg gcgggttagg cggtacctcc tgattgtcaa ggaagagggt
      361 aggagggcag aaccaccaac gaactcaggc ccataaggtt gaaaagcgtc ccggaaccgc
      421 aattgggaag cgcatgggaa acagcgggcc gttcccaaca cccaaaccgc ggacggcaac
      481 catccgttaa cccgctcgcg cgatcatcat ctcgtcgcgg tctgcactct cccgaggcga
      541 gccgcgcaac agcccctcgg aggcaacgcg gcgcgctccg aggggctttc cattcccgtc
      601 caagaaaatg cccgccgaag cgggccaagt tccattgctc aagaggtgca ggcggtggta
      661 ggtccggccg ccagcacggc ctcgctctcg tgcccgattg ccggtaatgg tgaggcggcg
      721 ctccaagacg ctccaaggtg ctccgcacga gccacagacc ggcgcggagc cgcgctctat
      781 gtgacgagca cccagaaaac cctgccgaaa gactttccag cagggtcaga gcgaggctcg
      841 gaaatcctgg cgaaggctac cggttcggcc agcctggccc aacaccggag ctcgcttaac
      901 gcgggccgcg gtgggtgctc gcctgtgcac cagcgaccct ccggaaccgc tcctctgacg
      961 cgagggcggg caagaacacg gtcaggaccg gctcgccagc ccccgatgtg atccggatct
     1021 ggcaggtggg gctgagaccg tctggaatga accagatcag cttctcgaac atgcgcaggg
     1081 catgaagatg accctcatag aggctctcca gctcttttcc gtcctcatcg aggacactat
     1141 gctttccatc gagaaggtga aagaagtacc ttggcattgc tgtgccctag ttggctctcg
     1201 atgtaagcca atctacaagg caagattgta agagcaggta gcagcatctc tttcattttt
     1261 agtgatctga gcttggatgt ttggtaatgc tactcacatc ttgacggatg agcggcattt
     1321 taatgaaaag ctcaactgaa cctgaatgct tagaggtcca cg
//
LOCUS       DASRPQ010001436         1575 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3633154, whole genome shotgun sequence.
ACCESSION   DASRPQ010001436 DASRPQ010000000
VERSION     DASRPQ010001436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1575
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3633154"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..419)
                     /locus_tag="VFD73_16370"
     CDS             complement(<1..419)
                     /locus_tag="VFD73_16370"
                     /inference="COORDINATES: protein motif:HMM:NF037651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit beta"
                     /protein_id="HZI75557.1"
                     /translation="MAVMAWFKKERKPRTSQRERLEIPPDAWEKCDGCGHIDLREKFE
                     KALNVCPECGRHRRIGAEEYIELLTDPGTWRELWGNLRSADPLHFEHYAERLVSARKK
                     GGQADGIYTGTAKLDGLPVNLGVMNFAFMGGSMGSVVG"
     gene            complement(524..>1575)
                     /locus_tag="VFD73_16375"
     CDS             complement(524..>1575)
                     /locus_tag="VFD73_16375"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: protein motif:HMM:NF037961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008955 - peptidoglycan
                     glycosyltransferase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HZI75558.1"
                     /translation="LLEWLAPALYGFSLALLVLVLLVGTGAGTAESSHSWLSIGGHQI
                     GQPSELAKVATVLMLARHLSSRREPPRFLRDLLIPGLIVGTPFLLVLKQPDLGSAIVF
                     IGIAFAMLFWAGVRPRLLFMIASPALSLLLAFNNWTWGAWMVGFTALMVLWRPYLADA
                     LVFGFLNVAMGTIALPLWQHLEPYQQNRLLTFINPEADPRAAGYHAIQSRVAIGSGGW
                     FGTGYTQGPQKRLAFLPEQHTDFVFPVVGEELGFIGVMIALSLFLILFLALLRIARRA
                     TDSFSSLVTFGILALFFTHVFENVGMTVNLMPITGIPLPFFSYGGSFFIICSLCLGLA
                     FRVAWDSRQAGYPDI"
BASE COUNT          321 a          524 c          501 g          229 t
ORIGIN      
        1 cccaccaccg atcccatcga gccgcccatg aaggcgaaat tcatgacccc cagattgacc
       61 ggcagcccgt cgagcttggc ggtgccggtg tagatcccgt cggcctgccc gcccttcttc
      121 cgggccgaca ccagccgctc cgcatagtgc tcgaaatgca gcggatcggc cgagcggaga
      181 ttgccccaca gctcgcgcca ggtgccgggg tcggtgagca gctcgatgta ctcctccgcg
      241 ccgatccgcc ggtgccggcc gcactcggga cagacgttga gggctttctc gaacttctcg
      301 cgcagatcga tgtgcccgca gccgtcgcac ttctcccacg cgtccggcgg aatctccagc
      361 cgttcgcgct gcgacgtccg aggcttgcgt tccttcttaa accatgccat cacggccata
      421 ggatgtgagg gtcgtcgggg tgaaggaggc aagggggctc acgaatccat ccaatttcag
      481 gcctcccctc cccaaacgcc aggcccttaa acttaagttg ttgtcaaata tcaggatagc
      541 cagcctgacg cgagtcccat gcgacccgga aagccagccc gagacataac gaacagatga
      601 tgaaaaagga tccgccgtac gagaaaaacg gtaacggaat gcccgtgatc ggcatcagat
      661 tgacggtcat tcccacgttc tcgaacacgt gggtaaagaa cagcgccagg atcccgaacg
      721 tcaccaggct gctgaagctg tccgtggccc gtcgggcaat ccggagcagc gccaagaaca
      781 gaatcaggaa cagcgacagc gcgatcatga ccccgatgaa ccccagctcc tcgcccacca
      841 cgggaaagac gaaatcggtg tgctgctcgg gcagaaaggc caaccgtttc tgggggcctt
      901 gggtgtagcc ggtgccgaac cagccgcccg agccgatcgc cacccgggac tggatggcgt
      961 ggtagccggc cgcccgcggg tcggcctcgg ggttgatgaa ggtgaggagc cggttctgct
     1021 ggtagggctc gaggtgctgc cacagcggaa gggcaatggt gcccatggcc acgttcagga
     1081 acccgaacac cagcgcgtcg gccaggtagg gccgccagag caccatgagc gcggtgaacc
     1141 ccaccatcca cgcgccccag gtccagttgt tgaacgcgag cagcaggctc agcgccgggg
     1201 acgcgatcat gaacagcagc cgcggccgca ccccggccca gaacagcatg gcgaacgcga
     1261 ttccgatgaa cacgatggcg ctgcccaggt cgggctgctt gagcaccagc agaaacgggg
     1321 tgccgacgat gagacccggt atcagcaggt cccggaggaa ccggggcggc tcccgtctgc
     1381 tcgacaggtg ccgggcgagc atcaggacgg tggccacctt ggccagctcg gaaggctgcc
     1441 cgatctggtg cccgccgatc gagagccagc tatggctgct ctccgcggtg ccggccccgg
     1501 tgccgacgag aagcaccagc acgagcagcg ccaggctgaa cccgtagagc gccggggcca
     1561 gccactcgag cagcc
//
LOCUS       DASRPQ010001437         1005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2354068, whole genome shotgun sequence.
ACCESSION   DASRPQ010001437 DASRPQ010000000
VERSION     DASRPQ010001437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2354068"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..>1005)
                     /locus_tag="VFD73_16380"
     CDS             complement(61..>1005)
                     /locus_tag="VFD73_16380"
                     /inference="COORDINATES: protein motif:HMM:NF013555.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="topoisomerase DNA-binding C4 zinc finger
                     domain-containing protein"
                     /protein_id="HZI75559.1"
                     /translation="VERFPKILDLKFTAHMEDELDGIAQAKEDMVKVLDEFYYPFQES
                     LKAATEQAGRVQILTEETCHVCGAPMALKFGRTGRFLSCSKYPDCKATRPIGGQPRAE
                     AVDSGHACPKCSKPLMIRENKRGEKFLSCSGYPGCKESFNIDEQGKPVPSRIETEHVC
                     DKCGKPMALRQGKRGPFLGCTGYPKCRNAKDVDAQGNPLQPIDTGLTCEKCNSPMVVK
                     RGPRGPFLGCSAYPKCRSTKPVPEDLKEKLKTLLPAPAKKAAPAVDVQETCPECGAPM
                     KLRPSRRGYFLGCSKFPKCRGTREAPPELLEQVQASTV"
BASE COUNT          156 a          328 c          324 g          197 t
ORIGIN      
        1 agacccaggg cgccacacaa gcagacgatt tcgacaaacc aaaacggctt ccaaatggtt
       61 tcaaaccgta ctcgcctgca cctgttccag caattcggga ggtgcttcgc gtgtaccgcg
      121 gcacttgggg aatttgctgc accccaggaa ataaccccgc cggctcgggc gcaatttcat
      181 gggggcccca cactccgggc aggtttcctg cacgtcgacc gccggcgccg ctttcttggc
      241 cggagccggc aggagcgtct tgagcttttc cttgaggtct tcgggaaccg gcttggtgct
      301 gcggcacttg ggataggcac tgcaccccag gaacggtccg cgcggcccgc gcttgacgac
      361 catggggctg ttgcattttt cacacgtcag cccggtgtcg atgggctgaa ggggattgcc
      421 ctgggcatcc acgtccttgg cgttgcggca cttgggatag ccggtgcagc ccaggaacgg
      481 gccccgcttg ccctgccgca gggccatggg cttgccgcac ttgtcgcaga cgtgctcggt
      541 ctcgatccgc gacggcacgg gcttgccctg ctcgtcgatg ttgaacgact ccttgcagcc
      601 ggggtagccc gagcaggaga ggaacttctc gccccgcttg ttctcgcgga tcatcagcgg
      661 cttggagcat ttggggcagg cgtggccgct gtcgacggcc tcggcccggg gctggccgcc
      721 gatcgggcga gtcgccttgc agtccggata cttcgagcag ctcaggaacc ggccggtccg
      781 gccgaacttg agcgccatcg gcgccccgca gacgtggcag gtctcctcgg tgaggatctg
      841 cacccgcccg gcctgctcag ttgccgcctt gagcgactcc tggaacgggt agtagaactc
      901 gtccaggact ttgaccatgt cctccttggc ctgggcgatc ccgtcgagct cgtcctccat
      961 gtgggcggtg aacttcagat ccaggatctt cgggaaccgc tcgac
//
LOCUS       DASRPQ010001438         1026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2068598, whole genome shotgun sequence.
ACCESSION   DASRPQ010001438 DASRPQ010000000
VERSION     DASRPQ010001438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2068598"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="VFD73_16385"
     CDS             <1..282
                     /locus_tag="VFD73_16385"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HZI75560.1"
                     /translation="ALKNLADRTGVADIRSLVSMMIQTDRFGTSVADALRVHSDTMRT
                     KRRQRAEEAAAKTTIKLVFPLVLLVFPAMFVVVIGPSALAIFRTFSKLT"
     gene            279..677
                     /locus_tag="VFD73_16390"
     CDS             279..677
                     /locus_tag="VFD73_16390"
                     /inference="COORDINATES: protein motif:HMM:NF014678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HZI75561.1"
                     /translation="MRLLRVVNTRLDQELGAKIRVADGWLGRLRGMLGRPAPKPGEGL
                     LLTPCTSVHMYGMRYPLDVVFLDREGTVVALYPSLAPGARTSWHRNATHALELPSETV
                     TRSGVKLGDVVAWSESPASADSPAALGVAS"
     gene            689..>1026
                     /locus_tag="VFD73_16395"
     CDS             689..>1026
                     /locus_tag="VFD73_16395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75562.1"
                     /translation="MTSHEPEVTEALAIPPSPENLGDIGLSADALRDLLLKALYVQGS
                     RTGQYLADYVRLPFPLVDEELLTLQQRRFIEVRGTVAPHRSSYLFDLAGEGRDRARAA
                     LESSQYVGPMP"
BASE COUNT          176 a          333 c          328 g          189 t
ORIGIN      
        1 gctctcaaga acctggccga tcgtaccggg gtggccgaca tccgctcgct ggtcagcatg
       61 atgattcaga ccgaccggtt cggaacgtcg gtcgctgatg ccctccgggt gcattccgac
      121 acgatgcgaa cgaaacgtcg ccagcgggcg gaggaagcgg cggcgaagac caccatcaag
      181 ctggtgttcc cgctcgtcct cctggtgttc ccggccatgt tcgtcgtggt catcggtccc
      241 tcggcactgg ccatcttcag gacgttcagc aagctcacat gaggctgctt cgggtggtga
      301 atactcggct cgatcaggag ctcggtgcca aaatccgagt cgcggacggc tggctgggac
      361 ggctcagagg aatgctgggt cggccagccc cgaaacccgg cgaaggactc ctgctcacgc
      421 cctgtacctc ggtgcatatg tacggcatgc gctatccgct ggacgtggta ttcctcgatc
      481 gcgaggggac agtagtcgcg ctctacccat ccttagcgcc aggggcgaga acgtcctggc
      541 accggaatgc cactcatgca ctggagctgc cgagcgaaac cgttactcgc tccggggtga
      601 agctggggga cgtcgtggca tggtccgagt cgccggcatc ggccgactct cctgcggcat
      661 tgggagtcgc ctcgtgagcg ccagccccat gacctcgcat gagccggagg tcaccgaagc
      721 gctcgccatt ccgccgagcc ctgagaacct cggggacatc ggcctatcgg cagacgctct
      781 gcgtgacctc ttgctcaaag cgctttacgt gcagggctct cgaaccggcc agtacctggc
      841 cgactacgtt cgacttccct tccctctcgt ggacgaagag ctgctcacgc ttcagcagcg
      901 ccggttcatc gaggttcggg ggaccgtcgc gccccaccgc tcgagttatc tgttcgacct
      961 ggcgggtgag ggaagagacc gcgcacgagc ggcgctggag tccagccagt acgtcggacc
     1021 gatgcc
//
LOCUS       DASRPQ010001439         2378 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4560684, whole genome shotgun sequence.
ACCESSION   DASRPQ010001439 DASRPQ010000000
VERSION     DASRPQ010001439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2378
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4560684"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..922)
                     /gene="alr"
                     /locus_tag="VFD73_16400"
     CDS             complement(<1..922)
                     /gene="alr"
                     /locus_tag="VFD73_16400"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HZI75563.1"
                     /translation="MRSWVDVDLAALLDNARTVASVSKSRLLPMVKANGYGLGAIQVV
                     RALERINPWGYGIAFSEEAAELRKAGIRRPLLVTTPLLPQWIDRYLELDLRPCIGDPA
                     AIEAWITRSGQPFHLEIDTGMSRGGIRWDDRASLEAVRDTLAHAPGWEGVFTHFVSAE
                     SDPEMTALQWTRFQEIVSSLPRRPALVHAANSAAALAGQTYAGDLVRPGVFLYGGEAG
                     ARPPRPVAALRGQVVALRSIQTTDPVGYNATWRARRPTLIATISVGYADGLPRSGAQP
                     ISDQPRQLELGGRLVPIVGRVTMDMCMVAVD"
     gene            981..1883
                     /gene="mazG"
                     /locus_tag="VFD73_16405"
     CDS             981..1883
                     /gene="mazG"
                     /locus_tag="VFD73_16405"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF007113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HZI75564.1"
                     /translation="MQDNSALGRAMAMVSDLRRRCAWDRAQTRETLRPYLIEEVLELD
                     QALSEGSVAAIRDELSDLLLHLAFQLVIGREHGEFTPEDVATQLEVKMRRRHPHLFDA
                     GEPEPWERIKRRERRGKILDGLVPSLPALLMAYRLQERAAAVGFDWPDVRGPVDKVRE
                     ELAEVEDHLTSTPERATGVDGDPNSLGATPTRELVEEIGDLLFAVVNLARKAGVQPGP
                     ALDRANRKFKQRFEQIEVLAEARGLDIATAGLEVLDQLWDEAKATQGSRVETMDLARE
                     GDRLSDVGNTADPGDRSLDSQAKP"
     gene            complement(1776..>2378)
                     /locus_tag="VFD73_16410"
     CDS             complement(1776..>2378)
                     /locus_tag="VFD73_16410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HZI75565.1"
                     /translation="DSDANMRLQQDFVCAIVSRALDRRREELKELERDTAPLERVQPP
                     FPRISYSDAVARLNELGSDITWGSDLGGDDETLLAQQYDRPVFVYNYPKEVKAFYMKE
                     NPDDPRTVLNNDCLAPEGYGEIIGGSQREDSYDKLLARIQEQGLDPEAYRWYLDLRKY
                     GTFVHSGFGLGIERTVAWICGIPHIREAIAFPRQIHRLYP"
BASE COUNT          453 a          725 c          772 g          428 t
ORIGIN      
        1 catcaaccgc taccatgcac atgtccattg tcactcggcc tacgatagga accaagcgtc
       61 ctcccagctc cagctgacgc ggctgatcgg aaatcggttg ggcacctgag cggggaaggc
      121 cgtcggcata tcccacggag attgtggcga tcagcgttgg tcgccgggcc cgccacgtcg
      181 cattgtagcc gaccgggtca gtggtttgaa tcgatcgcag cgcaaccacc tgcccccgca
      241 gtgcggcgac gggccggggc ggccgcgcgc cggcctcccc gccatacaga aagactccgg
      301 gacggacgag atccccggca taggtctgac cagccaatgc ggcagcgctg ttggcggcgt
      361 gaaccagcgc cggtcggcgg ggcagcgagc tcacgatctc ctgaaaccgg gtccactgca
      421 gcgcggtcat ttccggatcc gattcggcgg acacgaagtg ggtgaacacg ccttcccagc
      481 cgggcgcatg cgcgagcgta tctcgcactg cttcgagtga cgcccgatcg tcccaacgaa
      541 tacctccccg gctcattccg gtatcgatct ccagatgaaa cggctgaccc gaacgggtga
      601 tccaggcctc gattgcggca gggtcgccga tgcacggccg caggtccagc tccagataac
      661 gatcgatcca ctggggcagg agcggtgtcg tcaccagcag cggccgacga atgcccgctt
      721 ttcggagctc ggcggcttct tcgctgaagg cgatgccgta gccccacgga tttattcgct
      781 cgagtgcgcg aaccacctgg attgcgccaa ggccatagcc gttagctttg accatcggca
      841 gcagtctgct tttgctgacg ctcgcgaccg tgcgcgcatt gtccagcagt gccgcaaggt
      901 caacatccac ccaggaacgc atggtctcgg aggggaagct catggaaggc cggcggtatg
      961 atattccgcg ggaaccttag atgcaagaca attcggcgct tgggcgtgcc atggcaatgg
     1021 tcagtgatct gcggcggagg tgtgcctggg atcgggcaca gactcgcgaa acacttcggc
     1081 cgtacctgat cgaggaggtg ctcgagctgg atcaggcgtt gtccgagggc agcgtcgctg
     1141 cgattcgcga tgagctcagc gatctcctgc tccacctcgc cttccagctc gtcatcggtc
     1201 gcgagcacgg cgaatttacc cccgaggatg tggccaccca gctggaggtg aagatgcggc
     1261 ggcgccaccc gcacctgttc gatgcgggcg agccggagcc atgggaacga atcaaacgcc
     1321 gggagcggcg aggaaagatc ctggatggtc tggtcccgag cctaccagca ctgctgatgg
     1381 cgtataggct gcaggagcgc gccgccgcgg tgggattcga ctggcccgac gtccgtggtc
     1441 cagtggacaa ggtgcgggag gagctggccg aagtggagga tcacctcact tccactccag
     1501 aacgtgcgac cggagtggac ggcgatccca actccctggg cgccacgccg accagagagc
     1561 tggtggagga aataggagac ctgctgttcg cagtggtgaa ccttgcgcgg aaggcagggg
     1621 tgcaacccgg cccggcgctc gatcgagcca atcgaaagtt caagcagcgg ttcgagcaga
     1681 tcgaggtgct ggctgaggca cgaggactgg atatcgcgac cgccggtctg gaggtgctgg
     1741 atcagctatg ggatgaggcc aaggccacgc aaggatcaag ggtagagacg atggatctgg
     1801 cgcgggaagg cgatcgcctc tcggatgtgg ggaataccgc agatccaggc gaccgttcgc
     1861 tcgattccca agccaaaccc tgaatggaca aaggtgccgt actttcggag atccaggtac
     1921 cagcgatagg cttccgggtc gagtccctgc tcttggattc gggccaggag tttatcgtaa
     1981 ctatcctccc gttgggatcc gccgataatc tctccgtagc cttcgggagc caggcagtcg
     2041 ttgttcagga ctgtccgggg gtcgtccgga ttctccttca tgtagaaggc ctttacctcc
     2101 ttgggataat tgtagacgaa aacaggccgg tcatattgct gggccaggag cgtctcgtca
     2161 tcacccccca gatcgcttcc ccaggtgatg tcagatccca actcgttgag acgtgccacg
     2221 gcgtcgctgt aggagatccg cgggaacggc ggctgcactc gctccagcgg cgcggtatcc
     2281 cgctcgagct ccttcagctc ctctcggcgt cggtccaatg ctcggcttac aatggcacag
     2341 acgaagtcct gctgcagccg catgttcgcg tcggagtc
//
LOCUS       DASRPQ010001440         4418 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3328862, whole genome shotgun sequence.
ACCESSION   DASRPQ010001440 DASRPQ010000000
VERSION     DASRPQ010001440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4418
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3328862"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1527)
                     /locus_tag="VFD73_16415"
     CDS             complement(<1..1527)
                     /locus_tag="VFD73_16415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75566.1"
                     /translation="MRLRGFPYAVLPALLIAQPLRQSPDSRPITETDLYRFRWVADPQ
                     LSPDGSRITYVQVSVAPKHQSYETTLWIVSADGREAPRRLTSGTGDLSPAWSPDGRTI
                     AFLRSQKDSGTQQPPQIYLLRMDGGEAEQLTKLKNGAGSPVWSPDGKTIVFSSSAAPE
                     APAPPKRDEPDRTRPDTAKPAARDSADSNDEKESDVRVITRAFFRLNGAGYMDSTSRD
                     HLWSVSVPQAGSQPTVRQLTSGEFEESRPAWSPDGSKIYFLSDREPEPYYRPPDADLY
                     AIPAGGGEITKIASIDGVIDNYTVSHDGKRIALTGSLTGKPIRSYDQPDLFVLDVGSG
                     ISPRNLTAAYDFDIDDGIGGDQHAPRGRLNTAPVWSEHDSIIVVRSAEHGRSNLKRVS
                     LSGQVTPLESGDHEVVASSADRSGERMAVVLSSPTQIGDIFLTSLAGQAGRFTQLTHV
                     NDSLFREVKVAAPEEIWYKSFDGTRIHGWIQKPPEFTPGKRYPMILEIHGGPHSAYGY
                     T"
     gene            complement(1641..2027)
                     /locus_tag="VFD73_16420"
     CDS             complement(1641..2027)
                     /locus_tag="VFD73_16420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75567.1"
                     /translation="MNKPISPRTHGILDYATAGTAAIVSRLANFSRPAARTAQAWAAG
                     YSVLSALTDYPLSVKRAVPFKAHGALDAAMAPLFPALPWLLGFARDRRARNFFLGLTA
                     ITVLVTLLTDWSPSRSEQRWRHEPAM"
     gene            2339..2812
                     /locus_tag="VFD73_16425"
     CDS             2339..2812
                     /locus_tag="VFD73_16425"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI75568.1"
                     /translation="MSTRGDRRSRYSTDPTVLIVDDEETPRTTTCRMVRALGYQARVA
                     RDGREALRYIQQHPGEIRLILTDVIMPYMDGGELAERARDLHPRLPIVLMSAYPMGEI
                     AELIAAYPELPFLEKPFTTETLQRILTSLLGPPARAKGRRANDRVRYRDRVRQSS"
     gene            2819..3445
                     /locus_tag="VFD73_16430"
     CDS             2819..3445
                     /locus_tag="VFD73_16430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75569.1"
                     /translation="MTACRIFLLSPAHCGGKRAAILLNEHATFPLAQRLRSAGLTLGE
                     AFSFLSGLYFRGKLAYAGRFARPPAGQSGVQVITTDRGLVPADATVQASDLRDFSTVD
                     IAAKDPSYRLPLQRDISRLQQLPDADVVLLGSVASNKYVDVLLEVFGDRLLFPVEFVG
                     RGDMSRGALLLRAAEAGQELTYQPVAGAVRRGRRPPRLPPRRPARIDQ"
     gene            3459..4259
                     /locus_tag="VFD73_16435"
     CDS             3459..4259
                     /locus_tag="VFD73_16435"
                     /inference="COORDINATES: protein motif:HMM:TIGR02777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase ligase N-terminal
                     domain-containing protein"
                     /protein_id="HZI75570.1"
                     /translation="MAKQSSTGKKAAKKAPNRRVSAVAEAERQLQEYRRKRDFSRTAE
                     PRGGSVSKRHKLAFVIQKHAASHLHYDLRLELDGVMKSWAVPKGPSLDPSIKRLAMEV
                     EDHPIEYNTFEGTIPEGEYGGGTVMLWDRGTYTYGGSDPDPLEGLRNGYRKGDFKFIL
                     QGKRLKGSWVLVRTRRDPRGRAQWLLIKHKDEYASPGSDVTAEYQTSVATRRTMEEIA
                     GGKSRVWHSNRGSADADGGSAEPASRRASKAPDAKQSAYQRLMARRSR"
     gene            complement(4229..>4418)
                     /locus_tag="VFD73_16440"
     CDS             complement(4229..>4418)
                     /locus_tag="VFD73_16440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75571.1"
                     /translation="GGAMLKWNAATHPMIMVRDPDTGEVLSLLRGGTAMVQTAKREVV
                     LEVSDGIGSHRLRRAISR"
BASE COUNT          789 a         1370 c         1468 g          791 t
ORIGIN      
        1 cgtgtacccg tacgccgagt gtggcccgcc atggatctcg aggatcatgg ggtagcgctt
       61 ccccggcgtg aactcgggtg gtttttgaat ccacccatga attcgggttc cgtcgaagct
      121 tttgtaccag atctcttccg gagcggcgac cttcacttca cgaaataggc tgtcattcac
      181 gtgggtcagc tgcgtgaacc ggcccgcttg gccggcgagc gaggtgagga aaatgtctcc
      241 gatctgggtt gggctggaga gcaccaccgc catgcgctcg ccgcttcgat cggcgctgga
      301 ggcgacaact tcgtgatcgc cgctctccag gggcgtcacc tgtcccgaga gggatacccg
      361 tttgagattg gagcgtccgt gctccgccga tcggaccacg atgatcgaat cgtgctccga
      421 ccagaccggg gccgtgttca gacgtcctcg cggcgcgtgt tggtccccgc cgatgccgtc
      481 gtcgatatcg aagtcgtacg cggcggtcag attccggggc gagatgccgc tccccacatc
      541 cagaacgaag agatcgggtt gatcgtagga ccgaatcggt ttgccggtca ggctgccggt
      601 aagcgcgatc cgcttgccgt cgtggctcac cgtatagttg tcgatcaccc catcgatgct
      661 ggcgatcttg gtgatctcgc caccccccgc cgggatggcg tagagatcgg cgtcgggcgg
      721 ccggtagtac ggctccggct ctcgatccga gaggaagtag atcttggagc catccggcga
      781 ccaggcggga cgactctcct cgaactctcc ggaggtgagc tgccgaaccg tgggttgaga
      841 tccggcctga ggcaccgaga ccgaccagag gtgatccctg ctggtggagt ccatgtagcc
      901 cgcgccgttc agccggaaga aggcccgggt gatcacccgg acatcgctct ccttctcatc
      961 gttgctgtca gccgaatcgc gggccgccgg ttttgcagtg tccggtcggg tacgatccgg
     1021 ctcgtcccgc ttcggcggcg caggggcttc cggtgccgcc gagctggaga acacgatcgt
     1081 cttcccatcg ggtgaccaga ctggcgagcc ggcgccgttc ttgagcttgg tcagctgctc
     1141 tgcctcccca ccgtccatcc tcagcaggta aatctgtggc ggctgctggg tgccgctgtc
     1201 tttctgggag cgaaggaacg caatcgtccg tccgtcgggc gaccacgcgg gcgagagatc
     1261 cccggtgccg ctggtcaggc gccgaggtgc ctctcggcca tcggccgaga cgatccagag
     1321 cgtggtctcg taggactggt gtttcggcgc gacgctcacc tggacatatg tgattcggct
     1381 gccgtcgggc gagagctgtg ggtcggcgac ccagcggaag cgatagagat cggtctcggt
     1441 gatcgggcgg gagtccggcg attgccggag tggctgcgcg atcaggagcg cagggagcac
     1501 cgcgtagggg aagccacgga gtcgcatgcg ggcactcttt cgaagtgggt caagtgaagc
     1561 gggtcggcct aatgtgggag caggactagg ctggcgccag ttggctgggc gtcagcaccg
     1621 agcagacgtc ggacatgctc ttacatcgcc ggctcatgac gccagcgctg ctccgacctg
     1681 ctcgggctcc agtcggtcag cagggtcacc agcaccgtga ttgctgtcag gcccaggaag
     1741 aagttccggg cccgccggtc gcgcgcaaaa cccagcagcc agggaagagc agggaacagc
     1801 ggagccatgg cggcgtctag ggcgccgtgg gccttgaacg gaacggcgcg cttcacactg
     1861 agggggtaat cggtgagtgc ggagagcaca ctgtaacctg ccgcccaggc ctgagcggtt
     1921 cgggcggcgg gccgagaaaa gttcgccagg cgcgacacga tggcggcggt accggctgtg
     1981 gcgtagtcca ggataccgtg ggttcgggga gagatgggtt tgttcatggt ggctccggca
     2041 tcaggggtca gttgagtcgc gagtcacgag tcgcgagtca cgaccagcga ctctcgactc
     2101 tcgactctcc tcaaccctag cctactacca ccgcgcccgg tgtgccctgc ggcacaatgg
     2161 actgcctaga cggagcctcc atgtccccga actacccctt gcgaattcgc cagttaattg
     2221 tcttagttga cggaggttgt gagccgaaca tccgcatgac ttggcatgcg gtgccatcat
     2281 agaatcaccc tcgtcgtgga gggggcaaca ggcggttgat ctgccgccag gagccttcat
     2341 gtccaccaga ggagatcggc ggtcccgcta ctccaccgac cccaccgtcc tgatcgtcga
     2401 cgacgaggaa actccccgga ccacgacctg ccgaatggtg cgcgcactgg ggtaccaggc
     2461 acgggtggcc cgagacgggc gtgaggccct ccgctatatc cagcaacacc ccggcgaaat
     2521 ccggctcatc ctgactgacg ttataatgcc atacatggat ggcggtgagc tggccgaacg
     2581 ggctcgcgac ctgcatccca gactgccgat cgtgctgatg tcggcttacc cgatgggaga
     2641 gatcgccgag ctgatcgcgg cgtacccgga gctccccttt ttggagaagc cgtttaccac
     2701 ggagacgctg cagcggatcc tcaccagctt gctgggcccg ccggcccggg cgaaaggacg
     2761 cagggccaac gaccgggtcc gctaccgcga ccgggtgagg caatccagtt gagacgccat
     2821 gaccgcatgc cggatcttcc tgctttcgcc tgcgcactgc ggcggaaagc gggccgcaat
     2881 tctcctcaac gagcacgcca cctttccgct ggcgcaacgg ctgcgctcgg ccggactcac
     2941 tctgggcgag gcgttcagtt ttctgagcgg gctctacttc agaggaaagc tggcctatgc
     3001 cggccggttc gcccgcccgc cggcagggca gtccggtgtg caggtgatca ccactgatcg
     3061 gggcctcgta ccggcggacg ctacggttca ggccagtgac ctccgtgact tcagcacggt
     3121 agacatagca gcaaaggacc catcctaccg acttccgctt cagcgtgaca tctcccgact
     3181 ccagcagctt cccgacgcag acgtggtact gctcggcagc gtcgcaagca acaagtacgt
     3241 agacgtcctg ctcgaagtgt ttggtgatcg gcttctcttt ccggtcgagt ttgtgggccg
     3301 gggcgacatg agccgggggg cactcctctt gagagctgct gaggccgggc aggagctaac
     3361 ctaccagccg gttgcgggag cggttcggcg gggacggcgt cctccgcggc tcccgccgcg
     3421 gcggccggcg cgaatcgatc agtaggaagg agagtcgcat ggccaagcag tcgtccactg
     3481 gtaagaaagc cgcgaagaag gccccgaatc ggcgcgtcag tgcggtggct gaggccgagc
     3541 ggcagttgca ggaataccgg cggaagcggg acttcagtcg taccgccgag ccccgcggcg
     3601 gttcggtttc gaagagacac aagctggcgt tcgtcatcca gaagcacgcc gccagccatc
     3661 tgcactatga tcttcgcctg gaactcgacg gagtgatgaa gagctgggcc gtgcccaagg
     3721 gcccgagcct cgatccttcg atcaaacgac tagcgatgga agtcgaggac catccgatcg
     3781 aatacaacac cttcgaaggg accatcccgg aaggcgagta cggtggtggg acggtgatgt
     3841 tgtgggatcg gggaacctac acctacggcg ggagtgatcc cgatccgctc gagggtctgc
     3901 ggaacgggta ccgcaaaggc gatttcaagt tcatcctgca gggcaagcgc ctcaagggat
     3961 catgggtcct ggtcaggacc agacgggatc ctcgggggcg cgcgcagtgg ctgctcatca
     4021 agcacaaaga cgagtacgcc tcgcccgggt ccgacgtcac cgcggagtat cagacctctg
     4081 ttgctacccg ccgcacaatg gaggagatcg ctggggggaa aagtcgggtc tggcactcca
     4141 accgcggctc cgccgatgcc gatgggggtt cagcggaacc tgcttcacgg cgagcgtcca
     4201 aggctcccga cgccaaacag tcagcgtatc agcggctgat ggcccgccgg agtcggtgac
     4261 tgccgatccc gtcggagacc tccaggacaa cctcacgctt ggctgtctgc accatcgctg
     4321 tccctccccg tagcagggat agcacttctc cggtgtcggg atcgcgcacc atgatcatcg
     4381 ggtgagtcgc ggcattccac ttcaacattg cgcctccg
//
LOCUS       DASRPQ010001441         1179 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3633748, whole genome shotgun sequence.
ACCESSION   DASRPQ010001441 DASRPQ010000000
VERSION     DASRPQ010001441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3633748"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..431
                     /locus_tag="VFD73_16445"
     CDS             <1..431
                     /locus_tag="VFD73_16445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75572.1"
                     /translation="VMALPIAASTLFGSLGQAAGLYGVWPNAADAVRVLGSAVRSHPG
                     NYLAEDYDVEAYYLRAEVPWQRWSNTYYFRYQGLLPGAPSYAAAISHHYFSLVILDFG
                     DTAATDTQITGDMRRAGGYRVVARAGQFTVWAPGGDHGSR"
     gene            418..>1179
                     /locus_tag="VFD73_16450"
     CDS             418..>1179
                     /locus_tag="VFD73_16450"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI75573.1"
                     /translation="MALAEPAIAERWPDIYLPDPPDDQEKYKYFGKQRRWVFVWLLIA
                     SVGVLYGYIHVAQHAWLIAPLMWLLLMVMVPPIVVNFWLRVRPPRLTKAEHQAAVVSY
                     RESEHDETVDVFLPSCGEPLAVLDNTLRYVSAMKWTGPKTVYVLDDSARNDVRDLADK
                     YGFRYIVRPDPGRMKKAGNLTHALSVSSGEFIAVIDADFAVRPEFLYETMPYFADSKV
                     GIVQTAQYYDVSNRSFSYIQRYAGTLQEIFFRFIQP"
BASE COUNT          202 a          375 c          375 g          227 t
ORIGIN      
        1 cggtcatggc gctgccgatt gccgcgtcca cgctgttcgg ctcgctgggc caggcggccg
       61 ggttgtatgg ggtgtggccg aacgcggccg acgcggtccg cgtcctcggc tcagcggttc
      121 gctcccatcc aggcaactac ctggcggagg attacgacgt cgaggcttat tacctccgcg
      181 ccgaagttcc ctggcaacga tggtccaata cgtattactt ccgctaccag ggactgcttc
      241 ctggcgcacc ctcctatgcg gcggcgatca gccatcacta tttctcgctc gtgatcctgg
      301 acttcgggga tacggcagcg accgacacgc agataaccgg agacatgcgc cgggctggtg
      361 gctaccgtgt ggtggcccgg gccggccagt tcaccgtctg ggcgccgggg ggtgatcatg
      421 gctctcgctg agcctgcgat cgccgagcgc tggccggaca tctacctgcc ggatccgccc
      481 gatgaccagg aaaagtacaa gtacttcggc aagcagcgcc ggtgggtgtt cgtgtggctg
      541 ctcatcgctt cggtgggggt gctgtacggc tacattcatg tggcccagca cgcctggctc
      601 atcgccccgc tcatgtggct gctgctgatg gtcatggtgc cgccgatcgt ggtcaacttc
      661 tggctgcgtg tgaggccgcc ccggctgaca aaggcggagc accaggccgc cgtggtcagc
      721 taccgggaaa gcgagcacga cgagacggtg gatgtgtttc tgcccagctg tggtgagccg
      781 ctggccgtac tggacaacac gctccggtac gtgagcgcga tgaaatggac cgggccgaag
      841 acggtgtacg tactcgacga ctcggcccgg aacgacgtcc gtgacctagc ggacaaatac
      901 ggcttccggt acatcgtgcg gccggacccg ggccgcatga aaaaggccgg aaacctcact
      961 catgccctca gcgtcagctc gggggaattc atcgcggtca tcgacgccga tttcgctgta
     1021 cggccagagt ttctctacga gaccatgccg tacttcgccg actcgaaggt cggcatcgtc
     1081 cagaccgccc aatactacga cgtcagcaat cggtcattct cttacatcca gcgctacgcg
     1141 ggaacgctgc aggagatctt cttccgcttc atccagccg
//
LOCUS       DASRPQ010001442         1135 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4560880, whole genome shotgun sequence.
ACCESSION   DASRPQ010001442 DASRPQ010000000
VERSION     DASRPQ010001442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4560880"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(232..989)
                     /locus_tag="VFD73_16455"
     CDS             complement(join(232..659,659..989))
                     /locus_tag="VFD73_16455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611877.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZI75574.1"
                     /translation="MRRYRMRDDQWARIQDLLPGRVGHVGVTAKDNRLFVEAVLDRYR
                     TGIPWRDLPERFGCGVKVHTRFSRWAKAGVWERVFQHLAVDADNEYAMIDSTIVRAHQ
                     HAAGAPKKPGPDQAIGRSRGGLTTKIHALVDALGNPTGFHLTGGQEHDLAGADALLPA
                     LEAEALIADTAFDADQRVLEPLAEAGKAAVIPPRKTRTTPRAFDTDLYQARHLIENFF
                     AKLKQFRAIATRYDKTARCFLAGIHLTATLIWLN"
BASE COUNT          184 a          370 c          366 g          215 t
ORIGIN      
        1 ctgctgcttg accctgccga gttttagcct ccacgcggat accccgtaga tgcgacagcc
       61 ggtgaggtcg gcagcagtga ggtccgtctc gactaaattc gccccgctca ggtctgctcc
      121 gcctaggtct gccctgtaca ggtccgcccc gtccagatcc gccttgctca ggtttgcctt
      181 gctcaggctc aggcggtcaa ggttcgcgct acgccggctt agggcgtgtc ctcaattgag
      241 ccagatgagc gttgcggtga ggtgaatgcc ggcgaggaaa catcgcgcgg tcttgtcgta
      301 gcgcgtggca atggcccgga actgcttgag cttggcgaag aagttctcga tcagatgccg
      361 ggcctggtag aggtctgtgt caaaggcgcg cggtgtcgtc cgggtcttcc gaggtgggat
      421 gaccgccgcc ttgccggcct cggccaaagg ctcgagcacg cgctggtccg catcgaacgc
      481 cgtgtcggcg atgagcgcct cggcctccag cgcaggcagc aaggcatccg ctccagccag
      541 gtcgtgctcc tgaccaccgg tgagatgaaa gccggttgga ttgccgagcg catccaccag
      601 ggcgtggatc ttggtggtca ggccgcccct gctgcgcccg atcgcctggt caggcccagc
      661 tttttggggg cgccggccgc gtgctgatgc gcacgcacga tggtggagtc gatcatggcg
      721 tactcgttat cagcgtcgac tgccaggtgc tggaacacgc gctcccacac gccggccttg
      781 gcccagcggc tgaagcgggt gtggaccttg accccgcagc cgaaccgctc gggcagatcg
      841 cgccagggga tgcccgtccg atagcggtcg agcacggcct cgacaaacag ccggttgtcc
      901 ttggcggtca cgcccacatg cccaacccgc cccggcagca gatcctggat ccgcgcccat
      961 tgatcatcac gcatcctgta gcgtcgcatc ggtcagctcc tcatcgctga ccacccctca
     1021 accagaaatg gccccgcccc ggaagctctt attgaggaca cgccctaagg cctgttggga
     1081 ttcatcgtga gttgatgacg gctgcggcga ggtagatcat ggctgcgaag ctctg
//
LOCUS       DASRPQ010001443         1319 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2704900, whole genome shotgun sequence.
ACCESSION   DASRPQ010001443 DASRPQ010000000
VERSION     DASRPQ010001443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1319
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2704900"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..428)
                     /locus_tag="VFD73_16460"
     CDS             complement(<1..428)
                     /locus_tag="VFD73_16460"
                     /inference="COORDINATES: protein motif:HMM:NF012981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HZI75575.1"
                     /translation="MGWTAIVLNDSSGSGDSAKSAQQLSEIFAEAGREARITVARGGD
                     QLRTAMKEAVKRRCETLVAGGGDGTINTAASELVDSDIPLGVIPLGTLNHFAKDLGIP
                     IDLAGAAKVVLEGARCQVDVGEVNGRVFLNNSSLGAYPAIV"
     gene            complement(429..1073)
                     /locus_tag="VFD73_16465"
     CDS             complement(429..1073)
                     /locus_tag="VFD73_16465"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HZI75576.1"
                     /translation="MTAALLIGLVAAGIALAVFSWLGRDVILGVTWPLDGAIRNGIHA
                     IATPGLTRLMIAASLYGGPSGLVPLGVILALVFLFRRWHRGALLIGVTMAGAGLLDSV
                     LKQIFGRARPSAFFDYPLPASLSFPSGHAFFSASFLGGFAVLISGRVKSRVLRVLLWV
                     FTIALILLIGFSRVYLGVHYPSDVLAGYAVAVVWVTAVALGDRLASHRRRARTV"
BASE COUNT          257 a          438 c          409 g          215 t
ORIGIN      
        1 acgatcgcag gataggcgcc gaggctcgag ttattcagga agactcgccc gttgacctct
       61 cccacgtcga cttggcagcg cgctccctcg agcaccacct tcgccgcccc cgcgaggtcg
      121 atgggaattc ccaggtcctt ggcaaagtga ttcagggtgc cgagcgggat aacgccgaga
      181 gggatgtcgc tatccaccag ctcagaggcg gcggtgttga tcgttccatc cccgcccccg
      241 gcgaccagcg tctcgcaccg ccttttcaca gcctccttca tcgccgtccg cagctgatcc
      301 cctccccggg cgacggtgat gcgggcctct ctgccggcct cggcaaagat ctcgctcagc
      361 tgctgcgccg acttagcgct gtcgcctgag ccggaggagt cgttgagcac gattgcggtc
      421 caccccactc agaccgtccg tgcccgacgg cggtggctcg ccagccgatc gccgagggcg
      481 acagccgtca cccacaccac cgcgacggcg tagccggcga gcacgtcact gggatagtgc
      541 acaccgagat agacccggga gaacccgatc agcaggatga gagcgatggt gaacacccac
      601 agcaggaccc ggagcacccg actcttcact cggcccgaga tcagcacggc aaaacctccg
      661 aggaaactgg cggagaagaa cgcgtggcca ctgggaaagc tgagtgacgc cggcagcgga
      721 taatcgaaga atgcagatgg ccgcgcccgt ccgaatatct gtttaaggac gctatcgagt
      781 agcccggctc ctgccatggt cactccgatc agcaaggcgc cccgatgcca tcgtcgaaag
      841 aggaaaacca gggccagtat gacgcccaag ggcaccagcc cggatgggcc gccatagaga
      901 ctcgccgcaa tcatcaatcg ggtgagcccg ggggtggcga tggcgtggat tccattgcgt
      961 atggcgccgt ctaagggcca cgtcacccca aggatcacgt cgcgccccag ccacgaaaag
     1021 accgccaggg cgatgccggc cgcaaccaaa ccgatcagga gtgccgcggt catcgtgcgc
     1081 tcctgctccg cgggctgggc ggagctcgat gaggacggca tcgtcatggc tgctgcaatg
     1141 aggcccgccg gatggcttcc ggcaagccga ttcgatagaa tgcgcctgtc atcgaaccaa
     1201 ggtgctcata tgcggctcct cagcacatcg gtccatcggc ggcgcggcgt caccgtgctt
     1261 gggctggcga tcctgatcat cgtgatcgta gtgctggtga tttttctggt ccgctatct
//
LOCUS       DASRPQ010001444         2100 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2069156, whole genome shotgun sequence.
ACCESSION   DASRPQ010001444 DASRPQ010000000
VERSION     DASRPQ010001444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2069156"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..690
                     /locus_tag="VFD73_16470"
     CDS             <1..690
                     /locus_tag="VFD73_16470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75577.1"
                     /translation="NQEPGVVQQINSFVRSGEGDWSYLFTQEWPLGSLQHQLSYSLLL
                     QHSRREGTGLGDAVLNYRYQLIGTAQARTAMAPRVSLSLPLGNERLGRGSGGLGFQVN
                     LPLSLVLSPRLTTHWNAGATLVPSAGNESGRATTLSPNLGTSVVWSFSPKFDALVEAV
                     WINQESVVGEGRTSREGIALLSPGIRVAWEVANGVELVPGAAYTLDLSGPPGNDAIFL
                     YLSLEHPFHHQ"
     gene            complement(684..1625)
                     /locus_tag="VFD73_16475"
     CDS             complement(684..1625)
                     /locus_tag="VFD73_16475"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HZI75578.1"
                     /translation="MPGQGQPRVAVLGMTESGRGWATLLSGAGWPLTIYDPDAALLHA
                     GQEEIATRKRQAVASGISSTRDEWSDPLPGPPRLGRSLLDAVTNADWIIDTTASDLLH
                     RQRLLEQIERSARLAAVITCSVPGLSATDLCARLRRPARFVVTYALDPVEHIPAVEVI
                     PTNLTDPAVLEEIRHWLRRLGRTPVVLRKEIPGNATGRIAVAIWRECIRMVLDGVLEV
                     REVDALISSGLAARWAAAGPFQAAYLEAGERQTAQLSAIVRALETRWEGDTSHQLSPA
                     EHQQLIRLIERAYDGEGDVLKGARDERLGELRRIVGY"
     gene            1719..>2100
                     /locus_tag="VFD73_16480"
     CDS             1719..>2100
                     /locus_tag="VFD73_16480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75579.1"
                     /translation="MRIAYSMLHCLLLMPREPTAALQHEPIPRVAVEQQLARELHLVL
                     GDTIRIGSSSDAGGQPFVVGAIYQPRADPAEIAKGERHIRMHLPDLAGLLGAPDRVDR
                     LSIGIRPRISADSAAAALNRSAYGY"
BASE COUNT          372 a          681 c          648 g          399 t
ORIGIN      
        1 aaccaggaac ccggcgttgt tcagcaaatc aatagcttcg ttcgatcggg tgaaggtgat
       61 tggtcctatc tcttcaccca ggaatggccg ctcggaagcc tccaacacca gctgagttat
      121 tcgcttcttc ttcagcatag ccgccgcgag gggaccggtt taggggatgc ggttctcaac
      181 tacagatatc aactgatcgg cacggcccag gctcgcaccg cgatggcgcc cagggtttcg
      241 ctcagtctgc cgcttggcaa cgagcgtctg ggacggggca gcggcggtct tggattccag
      301 gtgaacttgc cgctgtccct ggtgctctct cccaggctga cgacccactg gaatgctggt
      361 gccaccctgg tcccctccgc cggcaacgag agcgggaggg caaccacgct cagccctaac
      421 ctgggtacca gcgttgtgtg gtcgttcagc ccgaagttcg atgcgctggt cgaggcagtg
      481 tggatcaatc aggagtcggt tgtcggggag ggaaggactt cacgggaggg catcgcgctt
      541 ctgagtccgg gcattcgggt cgcgtgggaa gtggcaaacg gggtcgagct ggtgcccggg
      601 gcggcctata ctctggatct gtccggtcca ccgggaaacg atgcgatctt tctttaccta
      661 agcctcgagc accctttcca ccatcaatag cccacgatcc tgcgaagctc tcccagcctc
      721 tcgtcgcggg ctcccttcaa cacgtcaccc tccccatcat acgcccgctc gatgagccgg
      781 atgagctgct ggtgctccgc cggcgaaagc tgatggctgg tgtctccctc ccagcgagtc
      841 tccagcgctc tcacgattgc gctcagctga gcagtttgcc gttcgccggc ttccagatac
      901 gcggcttgga acggtccagc ggcggcccac cgtgccgcca atcctgacga gatcagcgca
      961 tcgacctccc ggacctccag tacgccgtcc agcaccatcc gaatgcactc tcgccaaatc
     1021 gcgaccgcaa tccgcccggt agcgttgccg gggatttcct tccggaggac gaccggtgtc
     1081 cggcccaatc gccggagcca gtgccggatc tcttccagca cggcgggatc cgtcaggttc
     1141 gtggggatca cctcgactgc ggggatgtgc tctaccggat ccagggcgta ggtgaccaca
     1201 aaccgggccg gcctccggag gcgcgcgcac aggtcggtag ccgagagtcc tggtacgctg
     1261 caggtgataa cagcggcaag ccgtgcggat cgttcgatct gttccaggag tcgctgccga
     1321 tggagcaggt cgctcgcggt ggtatcgatg atccaatcgg cgttggtgac tgcatcgagg
     1381 agacttcgcc cgagccgcgg cggaccggga agtggatcgg accactcgtc tcgggtcgaa
     1441 gagatgcccg aggcaacggc ctggcgcttt cgggtcgcga tctcctcctg cccggcatgg
     1501 agcagcgctg cgtcggggtc gtagatggtc aacggccagc ctgctccgga gagcaaggta
     1561 gcccaccccc ggccggactc ggtcattccc agtaccgcaa ctctcggttg gccctgacct
     1621 ggcatgagcg ctccttctac tccggttcag taggcgaccg gcaccgctac tttaacatgg
     1681 accggcgact ctttcgccgg cgtgcacctg aaaggtccat gagaatagcg tactcgatgt
     1741 tgcactgctt gctgctcatg cctcgagaac caacagcggc actacagcat gagccaatcc
     1801 cccgagtcgc ggtcgagcag caactcgccc gcgagcttca cctcgtgctc ggcgacacca
     1861 tacgcatcgg ttcgagcagc gacgctgggg gacagccgtt cgtggttggt gccatatacc
     1921 agccccgtgc cgacccggcc gagatcgcca aaggcgaacg ccacatccgc atgcacctgc
     1981 cggatctggc cggactattg ggtgcgccgg accgggtaga tcgtctaagt atcggaataa
     2041 ggccccggat ttctgcagat tccgccgccg ccgccctgaa tcgaagtgcg tatggatacc
//
LOCUS       DASRPQ010001445         1231 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1433510, whole genome shotgun sequence.
ACCESSION   DASRPQ010001445 DASRPQ010000000
VERSION     DASRPQ010001445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1433510"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..951
                     /locus_tag="VFD73_16485"
     CDS             <1..951
                     /locus_tag="VFD73_16485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75580.1"
                     /translation="SGCLCFGDQPRVGYDNDAIYVGSEEFPTTGPGTFNQFFNGTEVY
                     AIAKQDVLSGVPSPTAWFFHNLEAGGIPVFGLDPAQSWSGSSTEWLLNSFPFDAQGNN
                     NTTADVVALWRSTGDKQIEATAPVLHVKVIPTEQYAFPVDAVSTAGTANALNADDDRI
                     TELEFLNGHLYTAFTSALNVAQDPTTYDGAAWLDISTTTGAVSAQGYVVFKGRYLIDP
                     AMWRSPNGPADIAFTETSSRLNPSAAFSSRPNDNATFSAPHITALGASPYVEVFFRWG
                     DYSWAAPDPVNGDIWMAAEDIPPVADQAPDINWGTEVFRD"
     gene            1039..>1231
                     /locus_tag="VFD73_16490"
     CDS             1039..>1231
                     /locus_tag="VFD73_16490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75581.1"
                     /translation="MLGQRLYGTCTAYVTDAGGMHMLGRSESGLAWMSSNGGPLLLVP
                     GELLLSWGGVCPPTDGQHIE"
BASE COUNT          229 a          406 c          381 g          215 t
ORIGIN      
        1 agcggctgcc tgtgttttgg cgatcagccg cgcgtcggct atgacaacga cgctatctat
       61 gtcgggtccg aagagttccc aacgaccggc cccggcacct tcaaccagtt cttcaacggc
      121 actgaggtct acgcgatcgc caagcaggac gtcctgagcg gcgtaccttc tccaaccgcc
      181 tggttcttcc acaacctgga ggcgggtggt atccccgtgt tcgggctgga tcccgcccag
      241 agctggagtg ggtccagcac cgaatggctg ctcaacagtt tcccgttcga tgcccagggc
      301 aacaacaaca cgacggccga tgtcgtcgct ctgtggcgtt ccaccggcga caaacagatc
      361 gaggctaccg ccccggtgct ccacgtgaag gtgatcccga ccgagcagta tgccttcccg
      421 gttgatgccg tcagcaccgc cggcaccgcg aacgcgctca acgccgacga tgatcgcatc
      481 actgagctgg agtttctgaa cggccacctc tacaccgcct tcaccagcgc gctcaacgtg
      541 gcgcaggacc cgaccaccta cgatggggcg gcctggctcg acatcagcac taccaccgga
      601 gcggtgtccg cgcagggcta cgtggtcttc aagggccgct acctgatcga ccccgccatg
      661 tggcgatcgc ccaacggccc ggcggacatc gcctttaccg agaccagcag caggttgaac
      721 ccgagcgcgg cgttctccag ccggccgaac gacaatgcaa cgttctccgc gccgcacatc
      781 accgcccttg gagcgtcacc gtacgtggag gtcttcttcc gctggggtga ctactcgtgg
      841 gccgcgccgg accccgtgaa cggcgacatc tggatggccg ccgaagacat tccgccggtc
      901 gctgaccagg ctcccgatat caactggggc acggaggtct tccgcgacta gatagctggc
      961 agacgggtat agtcgagatt caggccgagc atgcgcgcat ctgaggaggc atgagcgctt
     1021 ccgagaacga gcgcgggcgt gctcggccag cgtctgtacg gcacctgtac ggcatacgtg
     1081 accgatgcgg gaggcatgca catgcttggc aggtctgaaa gcggtttggc atggatgagc
     1141 agcaacggcg gaccactgct gctggtgccg ggtgaattgc tactttcctg gggaggtgtt
     1201 tgcccgccga ccgacggcca gcacatcgaa g
//
LOCUS       DASRPQ010001446         1752 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3633987, whole genome shotgun sequence.
ACCESSION   DASRPQ010001446 DASRPQ010000000
VERSION     DASRPQ010001446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3633987"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1189)
                     /locus_tag="VFD73_16495"
     CDS             complement(<1..1189)
                     /locus_tag="VFD73_16495"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HZI75582.1"
                     /translation="MLRLAIAQIRPQKGAYEQNLCRLGALFREVATWPEAPELIVAPE
                     AALTGYFLEGGVRDLAVSGDQIFDDLSRQHDEAGTPPLDIALGFYEVHGNRFYNSGLY
                     ATLGGSEAGIRHIHRKIFLPTYGVFDEERFVEAGRSVQAFDTRWGRAAILICEDAWHS
                     FTPMLAALDGAQLILIPSASPARGVISSDDTAGRPLSLARWSRLAQDIAGEHGVYVAL
                     AQLVGFEGGKAFPGGSILAGPRGDLLAQGPVFQESIIPGVLDFEEITRARADLPLLAD
                     LEMRLPHLLGSLHAARREKSVAADGSKRATKSSAEPRSPRQSVPAAPTVPLAPLPARF
                     HPVRDPLAIDPELTRRWLVEFIRDEVQRRRKFDRVVIGLSGGVDSSLVAYLATEALGA
                     PNVM"
     gene            1263..1652
                     /gene="crcB"
                     /locus_tag="VFD73_16500"
     CDS             1263..1652
                     /gene="crcB"
                     /locus_tag="VFD73_16500"
                     /inference="COORDINATES: protein motif:HMM:TIGR00494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1903425 - fluoride transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:1903424 - fluoride transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HZI75583.1"
                     /translation="MLLYVALGSAIGGVSRYLVGGLVQRLWSTTFPTGTLFVNFSGCF
                     LIGVLLRYSIDTPSFSPEVRALLTIGFCGGYTTFSTFSYETMALMNSGEWLRAALYVC
                     ASLVFSLAGTFLGTALARELILLRERL"
BASE COUNT          336 a          533 c          558 g          325 t
ORIGIN      
        1 ccatcacgtt cggggcgccc agcgcttcgg tcgcgaggta ggcgaccagt gagctgtcga
       61 ccccaccgga gagaccgata accacacgat cgaacttgcg tcgtcgctgc acctcatcgc
      121 ggatgaactc gaccagccag cggcgcgtca gctccgggtc gatggcaagc gggtcccgga
      181 ccgggtggaa tcgggccggc agtggagcaa gtggaacagt cggagcagca ggaacgctct
      241 gccgcggcga ccgaggctcg gcagagctct tggttgcgcg tttgctcccg tcagcggcga
      301 ccgatttctc ccgtcttgcg gcgtgcaagg atccgagcag atgcggcagc cgcatctcga
      361 ggtcggccaa caggggcaga tcggcgcggg cccgggtgat ctcctcgaag tcgagcaccc
      421 cgggaatgat cgattcctga aagacgggac cttgcgccag aaggtcacca cgcggccccg
      481 cgagaatgga gccgccggga aaggccttac cgccttcgaa tcccaccaac tgagccaggg
      541 ccacatagac cccatgctcg ccggcaatgt cctgggccaa gcggctccag cgggcgaggc
      601 tcagcggtcg gccggcggtg tcatcactgc tgatgacccc acgtgccggg ctggcgctcg
      661 ggatgagaat gagttgcgct ccatccaggg cagccagcat cggtgtgaaa gaatgccagg
      721 cgtcttcgca aatcagaatt gccgcgcggc cccagcgggt gtcgaatgcc tgaacgctcc
      781 ggccggcttc gacgaaccgc tcctcatcga ataccccata ggtcggcaga aaaatcttgc
      841 ggtggatatg cctgatgcct gcttcggagc cgcccagcgt ggcatacagg ccggagttgt
      901 agaagcggtt tccgtgtacc tcgtagaagc cgagggcgat atccagcggc ggggtacccg
      961 cttcgtcatg ctgccggctt aaatcgtcga aaatctgatc gccggaaacc gcaagatcgc
     1021 ggacgccgcc ttcgaggaaa tagccggtca gtgcagcctc cggcgcaacg atcagctcgg
     1081 gcgcctccgg ccaggtagcg acttcccgga acaaggcccc cagccggcag agattctgct
     1141 cgtaagcccc tttttggggc cggatctggg ctatggcgag tcggagcacg ccctaaaggt
     1201 aagaggtgcc aagtgagaag tgagggggtt tccatatcct gcatgacacg tcttattgtg
     1261 gcatgctcct gtatgtcgcg ctgggaagcg ccatcggcgg agtgagtcgg tacctcgtcg
     1321 gaggattggt tcagcgcctc tggagcacga cattccccac cggcacactc ttcgtcaatt
     1381 tcagcgggtg cttccttatc ggcgtacttc ttcgttactc catcgacact ccatcgttca
     1441 gtccagaagt gcgagccctg ctcaccatcg gcttttgtgg tgggtatacc acattctcca
     1501 ccttcagcta tgaaacgatg gccctgatga actcggggga atggttgaga gccgcgctct
     1561 atgtatgcgc cagcctggtc ttctcgttgg cgggaacatt tctgggaact gcccttgcgc
     1621 gggagctcat tctcttgcga gagcggctct gaaccgggag gcggcctggt gcacggtctg
     1681 acgggtgagc ggatcctgat gcggattcat atcggagagc gggacaagta ccacggcaaa
     1741 ccactctacg aa
//
LOCUS       DASRPQ010001447         2182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2069434, whole genome shotgun sequence.
ACCESSION   DASRPQ010001447 DASRPQ010000000
VERSION     DASRPQ010001447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2182
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2069434"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..761
                     /locus_tag="VFD73_16505"
     CDS             <1..761
                     /locus_tag="VFD73_16505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75584.1"
                     /translation="ALHRWFGNPALTRILNILFGARYTDVYCGYRAFSREAYDRIQPV
                     SPGMEFNLELAINAGLAGLRVTEVPIELATRKGESKLRTFRDGWRSLRMMLLYSPNML
                     FLLPGFLFLFTGLAIHLAVLLGIARWDGRPAAGVTGVFATILSVVGFEILSLGLHTKT
                     YSWTRRFDRHNRSLERFYRRFNLETGLLLGGILLLLGGGVLAGVVLEWLRASMLPLPH
                     PEWASLGATLFIIGASTLFSSLFISAMSMERQAQ"
     gene            765..>2182
                     /locus_tag="VFD73_16510"
     CDS             765..>2182
                     /locus_tag="VFD73_16510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75585.1"
                     /translation="MARRNAAYLGVLIALSVALWLPRLRGPLDLRYDAGVYYVLGTSL
                     AQGHGYRLLSEPGTIQAVQYPPLLPALVAVHQRLAGTADPAIAGHWLRMTYAFLFLAY
                     IVAAYLLAGRFLPPGLAFLTALITLLHVHTSWMSDLLFSEIPFALTTVLFLLVSSSRK
                     AARTGLAGALGTASYLLRSVGIATLAAWVAESFLRRSPRELITRGALCLIPILGWQLY
                     IGHVQKSAEYSHPAYTYQRAPYQYYNVSYLENIRYIDPFVPELGTVSAGTMAARLGGA
                     LVKMPASLGEAVSSRAEWSESQIERLNAELLSHPIPVWLVQVPLVLLGILALIGLVLL
                     AQRGEWLIPLYVLGSLALVGLTPWPGQFERYLAPLTPILALPLLVTLLTLRQRSSISS
                     VRWMPRLGGVLVVTILAGVLGQESFALYKVYTKQHRIVTYRDAQGRGHEQRLFFYTPA
                     WRTHDAALDWLRQTAKPEDVIAT"
BASE COUNT          344 a          688 c          667 g          483 t
ORIGIN      
        1 ccgcgctgca ccgctggttc ggcaacccgg cgctcacccg aattctcaac atcctcttcg
       61 gggcccgcta caccgacgtc tactgcggct accgcgcgtt ctcgcgcgag gcgtacgatc
      121 gcatccagcc ggtgagtccc ggcatggagt tcaatctcga gctcgcgatc aacgcgggac
      181 tggccggctt gcgggtgacg gaggtgccga tcgagctggc cacgagaaaa ggcgaatcca
      241 agctgcgcac gttccgtgat ggctggcgga gcctcagaat gatgctgctg tattcgccca
      301 acatgctgtt cctgttgccc ggctttttgt ttctgttcac tggtctggca attcatctgg
      361 cggtgctgtt gggtatcgcg cgctgggatg gccgtccggc agccggcgtt accggcgtgt
      421 tcgcgacaat cctgagcgtg gttggctttg agatattgag tttgggtctc cacaccaaga
      481 cctattcctg gacccgccgc ttcgaccggc acaaccgctc gctcgaacga ttctaccgcc
      541 gcttcaatct ggagaccggt ctgctgctcg gcggaattct gctgttgctg ggcggcggcg
      601 ttctggccgg cgtggtgctg gagtggttac gagcctcgat gctgccgctg ccgcatcctg
      661 aatgggcttc tctcggtgct acgctcttca tcatcggcgc cagtaccctg ttctcatcct
      721 tgttcatctc cgcaatgtcc atggagcggc aggcccagta gcccatggca cgaagaaacg
      781 ctgcgtacct gggagtcttg atcgcgcttt ccgtggcgct ctggcttccg cggcttcgag
      841 gaccgctcga cctccgatac gacgcgggcg tgtactacgt cctcggcact tctttggcgc
      901 aaggacacgg ctaccggctc ctgagcgagc ccggcacgat ccaggcggtg cagtacccgc
      961 ctctgctccc cgcgctcgtt gcggtgcatc agcggctggc cggaaccgcc gatcccgcca
     1021 tagcaggaca ctggctccgc atgacctacg ctttcttgtt cctcgcgtac atcgtggcgg
     1081 cgtacttgct ggccggccgt ttcttgccac ccgggctggc gtttctcacc gcgttgatca
     1141 ctctgctcca cgtccatacc agctggatgt cggatctctt gttctctgag atccctttcg
     1201 cactcacgac agtgctgttt cttctggtct catcgagtcg gaaggctgct cgcactggtc
     1261 tcgctggagc gctcggaacg gcgagttacc tgctccgtag cgtgggcatc gccacgctgg
     1321 cggcgtgggt ggcggagagc tttctgaggc ggagcccccg cgagctcatc acccgcggcg
     1381 cattgtgcct gattccgatc ttaggatggc agctctacat cggacacgta caaaagagtg
     1441 cggagtacag ccatccggca tatacctacc agcgagcacc gtatcagtac tacaacgtga
     1501 gctacctgga aaacatccgt tatatcgacc ccttcgtacc cgaattggga acggtctcgg
     1561 ccggtacgat ggctgcgcgg ttgggaggag cgctggtaaa gatgccggcc agcttggggg
     1621 aagctgtgag ctctcgggcg gagtggtcgg agtcgcagat cgagcggctg aatgcggagc
     1681 tcctgtcgca tcccatcccg gtatggctgg ttcaggtacc tctggtcctg ctcgggatcc
     1741 tcgcgctgat cggcctcgtt cttctggctc aaagaggaga gtggctcatt ccgctctacg
     1801 tcctcggttc gctggctctg gtggggctga caccctggcc agggcagttc gagcgctacc
     1861 tggctccgct cacgccgatt ctggcactgc cactgctcgt gactctgctg accctgcggc
     1921 agcggtcatc catcagttcg gttcgatgga tgcctcgcct aggaggggtg ctggtcgtca
     1981 cgatactggc tggagtgctg ggtcaggaga gctttgcgct ctataaggtc tacaccaagc
     2041 aacaccgaat cgttacctat cgtgacgctc agggtagagg gcacgagcaa cggctgttct
     2101 tctacacgcc ggcatggcgg acccacgatg cggcactcga ctggctgcgc cagaccgcca
     2161 aacccgagga cgtgatcgcc ac
//
LOCUS       DASRPQ010001448         2464 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2069444, whole genome shotgun sequence.
ACCESSION   DASRPQ010001448 DASRPQ010000000
VERSION     DASRPQ010001448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2464
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2069444"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..520
                     /locus_tag="VFD73_16515"
     CDS             <1..520
                     /locus_tag="VFD73_16515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75586.1"
                     /translation="LYRGDTSAPVAAALLWMGPDRCWTEAPEIIQAHLRRAAASPESA
                     IPAWPRAREWLPALAQPIRERLMTARGWKWIAPTPTPAARQLSIRLQRSIADASRRHQ
                     PARLASLERALAFLSDGHTAGEERLIELMVDRPESQIFEMVQKVLRTANQWGEVEARL
                     TGLIVFGPAQVA"
     gene            520..1191
                     /locus_tag="VFD73_16520"
     CDS             520..1191
                     /locus_tag="VFD73_16520"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HZI75587.1"
                     /translation="MRASFSGMPQLTTALFDLDGTLIDSIRLILDSYHHTLAQHKLPA
                     RSDEEWLRGVGTPLQVQFSAWQNSPEMLQAMIATYRAFNLEHHDRMVTVYPGVLDAVR
                     ELKAAGVQTGLVTSKNRQGALKGLQLVGLEALMDVLVCADEVGNPKPHPEPVEKAVSL
                     LGASPSATVYVGDSIHDMVSGRAAGVHTAAALWGPFKRSHLESAGPDYWLETPADLVR
                     LVLGT"
     gene            complement(1188..>2464)
                     /locus_tag="VFD73_16525"
     CDS             complement(1188..>2464)
                     /locus_tag="VFD73_16525"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI75588.1"
                     /translation="VLGQEILVDAVDGARKTIRSSAVPMRGAEGELIGGVVISEDVTD
                     ERAREQAERQQSEQLQQTQRMEAVGRLAGGIAHDFNNLLTGILSYSDLILQELRPSDP
                     LREDVEQIRDAAQRAAGLTRQLLAFSRRQLLNPRVVSLNLTVTELEPMFRRLLGPEVT
                     LETRLDPELGNIVVDPGQLEQVLLNLILNARDAMRAGGQVSLTTMNAELNGEAYVAIR
                     VSDTGVGMEEEIQPRIFEPFFTTKHTGAGRGLGLSTVYGIVEQSGGRISVESVPGQGA
                     TFTIYFPRHWGMEPAIGTATQQMPQVGTETLLLVEDEAAVRSSVRRLLEWHGYTVLEA
                     RNGAEALRVYEAHAEDIDLVLTDVVMPEMGGHELIERLRQRHPELRVLFMSGYAERAL
                     TNDGSIPAGTGYLEKPFTVETLMRRLREVLDA"
BASE COUNT          466 a          786 c          739 g          473 t
ORIGIN      
        1 cctctaccgt ggagatacct ccgctcctgt agccgccgcg ctgctctgga tgggccctga
       61 ccgatgctgg actgaagcgc cagagattat tcaggcacac ctaagacgcg cggcagcctc
      121 acccgagagc gcgattcctg cgtggccccg ggcacgagag tggctcccgg cattggcgca
      181 acccattcgg gagcgcctga tgactgcgcg gggttggaaa tggattgcgc cgacgccaac
      241 gcctgctgcg cgccaactat cgattcggct gcaacgatcg attgccgatg cctctcggcg
      301 gcatcagccg gcccgcctcg cctctctcga acgggcgctc gcttttctgt cggacggaca
      361 caccgcgggt gaggaaaggc tgatcgagct catggtggat cgaccggagt cgcagatctt
      421 cgagatggtc cagaaagtct tgcgcacagc caatcaatgg ggcgaggtgg aggcgcgcct
      481 taccgggttg atcgtgttcg gacctgcgca ggttgcctga tgcgggctag tttttctgga
      541 atgccgcagc tgaccactgc cctcttcgac ctggatggaa cactcatcga ctccatccgg
      601 ctgatcctgg acagctatca ccacacgttg gctcaacaca agttgcctgc tcggagcgat
      661 gaggaatggc ttcgcggtgt gggcacgcct ctgcaggttc agttctcggc ctggcagaac
      721 tctcccgaaa tgttgcaggc gatgatcgcc acctatcgag cgttcaattt ggagcaccac
      781 gaccgcatgg tcacggttta tcccggcgtg ctggacgcgg tacgggagct caaggcggca
      841 ggagtccaga cgggactcgt caccagcaag aatcggcagg gagcactcaa aggtcttcag
      901 ttggttgggc tcgaagcgct gatggacgtt ctggtctgcg ccgacgaggt cggcaatccc
      961 aaaccacatc cggagccggt cgaaaaggca gtgagcctac tgggagccag cccttcagcc
     1021 accgtttacg tgggcgacag catccacgac atggtgtccg gccgagcggc aggagtccac
     1081 acggcggcgg ctctgtgggg gcccttcaag cgctcccatc tcgagagcgc cgggccggat
     1141 tattggttgg aaactccggc agacttggtc aggcttgtcc tgggtactta agcgtccagc
     1201 acttcacgga ggcgccgcat cagcgtctcc acggtaaagg gcttctccag atatccggtg
     1261 cctgccggaa tcgagccgtc gttggtaagt gcccgctcag cgtaaccgga catgaagagg
     1321 acgcgaagct cagggtgccg ctgccgcagc cgctcgatca gctcgtggcc gcccatctcc
     1381 ggcatgacca catcagtcaa taccagatcg atatcctcgg cgtgggcctc gtacacccgc
     1441 agtgcctccg ccccgttacg agcctccagg acggtatagc catgccattc gagcagacgc
     1501 cgtactgaag aacgaactgc tgcttcatct tccactagca gcaacgtctc cgtccccacc
     1561 tgcggcattt gctgggtcgc agtgccaatg gccggttcca tgccccaatg gcgagggaag
     1621 tagatggtga aggtggcacc ctgaccgggt acactctcga ccgagattcg accaccgctc
     1681 tgctcgacga tcccatacac cgtcgagagt cccaggccgc gacctgcacc ggtatgcttg
     1741 gtcgtaaaga atggctcgaa gatgcggggc tgtatttcct cctccattcc aaccccggta
     1801 tcacttaccc gaatagcgac gtacgcctcg ccgttcagct cagcgttcat ggtcgttaga
     1861 gacacctggc caccagctct catcgcatcc cgggcattca ggatcaaatt cagcagcacc
     1921 tgttcgagct gaccaggatc gaccacgata ttgcccagct ccggatcgag acgggtctcc
     1981 agggtcactt cgggaccaag cagccggcgg aacatcggct ccagctcggt gaccgtcaga
     2041 ttcagcgata ccacccgcgg gttcagtaac tgacgccgac tgaaggccag cagttgccgg
     2101 gtgagtccgg cggcacgctg ggcggcatcg cggatctgct cgacgtcctc ccgcagtgga
     2161 tcgctgggcc gaagctcctg gaggatgaga tcgctgtagc tgagaatacc ggtgagcaag
     2221 ttgttgaagt cgtgagcaat gccaccggcg aggcggccta ccgcctccat cctttgggtc
     2281 tgctgcagct gttcgctctg ctgacgctcg gcctgttcgc gagcacgctc atcggtgaca
     2341 tcttcgctga tcactactcc accgatcagc tccccctccg cgccgcgcat cggaacggct
     2401 gagcttcgga tggtcttgcg agccccgtcg actgcgtcga ccagaatctc ctgaccaagc
     2461 acgg
//
LOCUS       DASRPQ010001449         1680 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2981257, whole genome shotgun sequence.
ACCESSION   DASRPQ010001449 DASRPQ010000000
VERSION     DASRPQ010001449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2981257"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1049
                     /locus_tag="VFD73_16530"
     CDS             <1..1049
                     /locus_tag="VFD73_16530"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZI75589.1"
                     /translation="QSFVLKKNPNYWQPEKQKIAGIKMLAFAGNDGANLAAANGDVDW
                     APQYIPNIGKTFVSKDKDHRHYWFPPTGAMINWQLNTTRAPFNDVDVRKALSMAVDRD
                     QVTKIGMSGYAQPADCTGLSGNYETWKNSQIKDNCTWTNHDVQKANELLDKAGYAKGA
                     DGKRTLKDGKPFEFKISVGSSSSDWLSVANVISQNLAEVGVTAKVDSPDWAAVVSGYE
                     TGDFDSGIVWSANDPSPYKYFNTSMGSSTVKPVGTKTFDNYHRFGDPKADALLTEFAT
                     ATDQSKQKDIANKLQEEYNDAAPLVPLFSGPEWGAYNDTRFIGWPTQDNPYATLSVRA
                     PTTVLVLTSLEPRK"
     gene            1143..>1680
                     /locus_tag="VFD73_16535"
     CDS             1143..>1680
                     /locus_tag="VFD73_16535"
                     /inference="COORDINATES: protein motif:HMM:NF040248.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI75590.1"
                     /translation="MRFILRRLGFYLIAFWASITLNFLLPRFMPGDPVSRMFARSQDR
                     MQPEQLEALRKLLGVDNRPIWEQYAGYLQNILTGQMGVSITRFPTPVTEVISSQIGWT
                     LLLGGTALVIAAVVGNLLGILAAWRRGSALDSALPPVLVFIGSFPYFWLAMGALYLFG
                     VVLGWFPIRHAFTDGLEPA"
BASE COUNT          333 a          599 c          471 g          277 t
ORIGIN      
        1 cccagtcctt cgtgctgaag aagaacccca actactggca gccggagaaa cagaagatcg
       61 ccggcatcaa gatgctcgcc ttcgccggga acgacggcgc caacctcgcc gcagccaacg
      121 gcgacgtgga ctgggctccg cagtacatcc cgaacatcgg gaagaccttc gtctcaaagg
      181 acaaggacca ccggcactac tggttcccgc ccacgggcgc catgatcaac tggcagctga
      241 acaccaccag ggcgccgttc aacgacgtgg acgtccgcaa ggcgctgagc atggcggtgg
      301 accgggacca ggtcaccaaa atcggcatga gcggctacgc ccagcccgcg gactgcaccg
      361 gcctgtccgg caactacgaa acctggaaga acagccagat caaggacaac tgcacctgga
      421 ccaaccacga cgtccagaaa gccaatgagc tgctggacaa agcgggctac gccaagggcg
      481 ccgacggcaa gcgcacgctc aaggacggca agccgttcga gttcaagatc tccgtgggtt
      541 caagctcgtc cgattggctc tcggttgcca acgtgatctc ccagaacctg gcagaagtcg
      601 gtgtgaccgc gaaagtggac tccccggact gggccgctgt tgtgtcaggc tacgaaaccg
      661 gtgactttga ctccggcatc gtctggagcg ccaacgaccc cagcccgtac aagtacttca
      721 acacctccat gggctcctcc acggtgaagc cggtgggtac caagacgttc gacaactacc
      781 accgtttcgg cgaccccaaa gccgatgccc tgctgacgga gttcgctacc gccacggacc
      841 agtccaagca gaaggatatt gccaacaagc tgcaggaaga gtacaacgac gccgcaccgt
      901 tggtgccgct cttctccggc ccggagtggg gtgcctacaa cgacacccgc ttcattggct
      961 ggcccaccca ggacaatccc tacgccaccc tctcggttcg cgcacccacc acggttctgg
     1021 tgctgaccag cctggaaccg cgcaagtaag ggcctggccg cccaccgcgc gacaccgctg
     1081 gccgccggac tatccggcgg ccagccccca cactttcacc actcccgaat tggagggaaa
     1141 ccgtgcgctt catcctgcgc cgcctgggtt tctacctgat cgccttctgg gcatccatca
     1201 ccctgaattt cctgctcccc cgcttcatgc ccggggaccc cgtatcacgc atgttcgccc
     1261 gctcccagga cagaatgcag cccgaacagc tcgaggccct gcgcaagctg cttggcgtgg
     1321 acaaccggcc catctgggag cagtacgccg gctacctcca gaacatcctc accggacaga
     1381 tgggggtatc gattacacgc ttccccacac ccgttaccga agtcatctcg tcccaaatcg
     1441 gctggaccct cctgcttggc gggaccgcgc tggtgattgc cgccgtcgtg ggcaacctgc
     1501 tgggcatcct ggcagcctgg cgccgcggca gcgccctcga ctcggccctg cctcccgtgc
     1561 tggtcttcat tggatcgttc ccctacttct ggctggcaat gggcgccctg tacctgttcg
     1621 gcgtcgtgct cggctggttc cccatccgcc acgcgttcac cgacggcctg gagccggcgt
//
LOCUS       DASRPQ010001450         3647 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1100406, whole genome shotgun sequence.
ACCESSION   DASRPQ010001450 DASRPQ010000000
VERSION     DASRPQ010001450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3647
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1100406"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..356)
                     /locus_tag="VFD73_16540"
     CDS             complement(<1..356)
                     /locus_tag="VFD73_16540"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HZI75591.1"
                     /translation="MSVTVSIPTPLRGFTAGRDTVELTGETVGQVLDGLLSTHTGLRR
                     HLVQEDGRLRNFVNLYLNETDIRHLSSTATPVRPGDVLTIVPSIAGGAPTTQAGALSH
                     AEVLRYSRHLLLPEVG"
     gene            complement(360..785)
                     /locus_tag="VFD73_16545"
     CDS             complement(360..785)
                     /locus_tag="VFD73_16545"
                     /inference="COORDINATES: protein motif:HMM:NF025819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M67 family metallopeptidase"
                     /protein_id="HZI75592.1"
                     /translation="MTIRMSGALADEIRRAGELAYPAECCGVLGGRVKEVKEVVLLSP
                     VVNRRTDDPRRYLISPDDLLQITNDLRRSELEVVGYYHSHPDHPAEPSAFDSEHAWPW
                     YSYLIVRVDHGQASDITSWVLEEDCAALRQEALQVFSEV"
     gene            complement(782..1705)
                     /locus_tag="VFD73_16550"
     CDS             complement(782..1705)
                     /locus_tag="VFD73_16550"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase family protein"
                     /protein_id="HZI75593.1"
                     /translation="MRREVLSSSQEPALWQAVGNTPLLPIALPSGYGRLYLKAEWLNP
                     GGSVKDRAARAILRDGICRGELPGKRLLDASSGNTGIAYAMLGAAAKIGVTICLPSNA
                     SPERKALLEMYGAEVIETDRLEGTDGAVQRARDLVAEQADQNYYADQYSNPANPREHR
                     ETTGPEIWAQTQGAITHFVAALGTTGTMMGTGRFLKEMKRSVRLIGVQPDSPYHGLEG
                     LKHLATTAHPPSLYDPAALDAVAEIATEKADATARRLAKETGMLVGWSAGAAVAAALD
                     IVRADSDATVVVIGCDTGARYLSEPHRWREP"
     gene            complement(1768..2226)
                     /locus_tag="VFD73_16555"
     CDS             complement(1768..2226)
                     /locus_tag="VFD73_16555"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HZI75594.1"
                     /translation="MRVTTWTEYSLIISIHLAKRGRRGIGPVAARELADTERLPADYV
                     EQILLRLRRAGLVESVRGAKGGYYLAKDPGAISVRDVMAASEHQTFEINCETHPVDAD
                     RCNPGHTCSIRPVWHALQQRVDELLASISLADLMKQESEVQELVGISSAN"
     gene            complement(2278..3078)
                     /locus_tag="VFD73_16560"
     CDS             complement(2278..3078)
                     /locus_tag="VFD73_16560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75595.1"
                     /translation="MALAPTQSLVETPSRLFYRDAMEVLNRANIPFLVGGAFAFIHQA
                     GIDKSTKDLDIFARPGDVQRLLEACAAAGYETELVFSHWLAKIRSPEGFIDVIFSSGN
                     GIATVDDGWFEHSSSGAVLNVPVRIAPPEETIWSKAFVMERERYDGADVSHLILALGE
                     RLDWGRLIARFGDHWRVLLAHLILFGFIFPSARTRVPAWVLRDLLQRLEGELAAPETS
                     EPVCYGTLLSWSQYLGDVLSGAFRDGRIRPYGNMSPEEVARWTSADKR"
     gene            3189..>3647
                     /locus_tag="VFD73_16565"
     CDS             3189..>3647
                     /locus_tag="VFD73_16565"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HZI75596.1"
                     /translation="MTKSNRTVRIAAVGDIHLGGKGLDPPLQILFGQVMEQADVLALC
                     GDLTDRGDPEEARLMARALATVSMPIVAVLGNHDYECGKVPEVSRILCDAGVRVLDGD
                     AYEVMGVGFAGVKGFAGGFGRGALGPWGEPLIKQFVREAVDEALKLETALS"
BASE COUNT          703 a         1168 c         1117 g          659 t
ORIGIN      
        1 atccctacct cgggcagcag cagatgcctg gagtagcgca agacctcagc atgcgacagt
       61 gctccggcct gggtcgtggg ggcacccccc gcaatactcg gaacgatggt caacacatcg
      121 cccggccgaa ccggagtggc ggtagacgag aggtggcgga tatcggtctc attcagatag
      181 aggttcacga agttccgaag gcggccgtct tcctgcacaa gatgtcgcct cagaccggtg
      241 tgtgtgctga gcaaaccgtc gagcacctgg ccgacggttt cgcccgtaag ctccacggtg
      301 tcgcggcccg cggtgaaccc gcggagaggc gtgggaatcg agacagtgac actcattgac
      361 tatacctcgc tgaaaacttg caaagcttcc tgacggagtg cggcgcaatc ttcttccaag
      421 acccagctgg tgatatccga tgcctggccg tgatccaccc ggacaatgag gtaactgtac
      481 cagggccagg catgctcgct gtcgaacgcc gagggttcgg ccggatggtc cggatgggaa
      541 tggtagtacc ccaccacctc gagctcagac cggcgtaagt cgttggtgat ctgaagcagg
      601 tcatccggag atatgagata ccggcgaggg tcatcggtcc ggcgattcac cacaggactc
      661 agcagcacca cttccttgac ctccttgacc cggccgccga ggacgccgca gcactccgca
      721 gggtaggcga gctcgcccgc acggcggatc tcatccgcca gcgccccact cattcggatg
      781 gtcacggctc acgccagcgg tgcggctcgc tcaaataccg ggctccggtg tcacatccaa
      841 tgaccaccac agtagcgtca gagtcggctc gcacgatatc gagcgccgca gcgaccgccg
      901 caccggccga ccacccgacc agcattccag tctctttggc caggcggcgg gcggttgcgt
      961 ccgccttttc cgtcgcaatc tccgccacgg catccaacgc tgccggatca tagagcgaag
     1021 gcgggtgagc ggtggtggcc aagtgcttca atccttccag gccgtggtag ggcgaatcgg
     1081 gctgaactcc gatcaatcga acgctgcgct tcatttcttt caggaacctg ccggtaccca
     1141 tcatagttcc ggtggttccc agcgccgcga caaagtgcgt gatggcacct tgtgtctgag
     1201 cccagatctc cggccccgtg gtctcgcgat gctcccgcgg gttggcagga ttgctgtact
     1261 gatcggcgta gtagttctgg tctgcctgtt cggccacgag gtcccgcgca cgctgaaccg
     1321 caccatcggt gccctccagc cggtcggtct cgatcacctc ggcgccatac atctccagca
     1381 acgccttccg ctcgggactg gcgttggacg gaagacagat agtgaccccg attttcgcag
     1441 ctgctcccag catggcatac gcaataccgg tgtttccgct cgaggcatcg agcagtcgct
     1501 tgcccggcag ctctccccga caaatcccat cgcgcaggat ggcccgagct gcccggtcct
     1561 tcacactacc gccgggattg agccactcgg ccttcaggta cagtcgtcca tacccggagg
     1621 ggagcgcgat cggaagcaat ggtgtgttcc ccaccgcttg ccatagcgct ggttcctgac
     1681 tcgatgacag cacttcacgt cgcatgggtt tcctcataac aaaaagcccg actctcggtc
     1741 gggcatcgct cgagcacttc gtccgagtca gtttgccgag gagatcccga ccagctcctg
     1801 cacttccgat tcctgtttca tcaggtcggc cagcgagatg ctcgcgagca gctcgtccac
     1861 tcgctgttgc agggcatgcc agaccggccg gatgctgcag gtgtgccccg gattacatcg
     1921 gtcggcgtct accgggtggg tctcacagtt gatctcgaac gtctggtgct cggaagcggc
     1981 catgacatca cgaaccgaaa tagctccggg atccttggcc aggtaatagc cgcctttggc
     2041 gccccggacg ctctccacca gcccggcgcg acgaagccgg agcagaatct gctcgacata
     2101 atctgccggg agtcgctcgg tgtcggccag ctcgcgcgcg gcgacggggc caatacctct
     2161 acgcccccgc ttggcgagat gaatcgagat gatcaggctg tattcggtcc aggtggtgac
     2221 ccgcatgcag ggaatatgtt gccgggcggg gcgggaatca atcgcagatg tgaccggcta
     2281 ccgcttgtcg gcggaggtcc aacgcgccac ttcttccggg ctcatgttgc cgtagggccg
     2341 gatccggccg tcccggaacg ccccactgag cacgtcgccc aggtactgcg accacgacaa
     2401 cagcgtgcca tagcagaccg gttcggaggt ctcgggagcg gccagctcgc cctccaaccg
     2461 ctgcagcaga tcccgcagca cccaggccgg tacccgggtg cgagccgatg gaaagatgaa
     2521 cccaaagaga atcaggtgag cgagaaggac ccgccagtgg tcgccgaagc gcgcaatgag
     2581 ccgcccccaa tccagacgct cgcccagggc gagaatgagg tgtgacacat cggcgccatc
     2641 atagcgttcc cgttccatca cgaatgcctt ggaccagatc gtctcctccg gcggcgctat
     2701 tctgacgggg acattcagca ccgcaccgga actggagtgc tcaaaccagc cgtcatcgac
     2761 cgtcgcaatg ccgttccccg agctgaaaat gacatcaatg aacccttcgg gagaccggat
     2821 ctttgccagc cagtgggaga acaccagctc cgtctcgtac cctgccgcgg cacatgcctc
     2881 gagcagtcgc tgtacatcgc ctggtcgtgc gaagatgtcc agatctttcg tggacttgtc
     2941 gatgcccgcc tggtgaatga aggcgaaggc cccgcccacc agaaacggga tgttcgcacg
     3001 gttgagaacc tccatcgcgt cgcgataaaa gagccgagaa ggagtctcga ccaacgactg
     3061 cgtgggcgcg agggccatct ccggactcct cagggggcag gactctcata tttattgggg
     3121 atcggggtat tgcggtgtgg cgcgcgtcac cgcgaccccc gaccgccaac gactcatttg
     3181 gggtcttgat gacaaaatcc aaccgtacgg tccgcattgc agcggtggga gacattcacc
     3241 tgggtggaaa gggactggat cccccgctcc agatcctgtt cgggcaagtc atggagcagg
     3301 cggacgtgct cgccctctgc ggcgatctga ccgatcgcgg cgacccggag gaagcccggc
     3361 tcatggccag agcgctggcc acggtgtcaa tgcccatcgt agcggtgctc ggcaatcacg
     3421 attacgaatg cggaaaagtc cccgaagtat cccgcatcct ctgcgacgcc ggcgtcaggg
     3481 tcctcgacgg ggacgcctac gaggtcatgg gtgtcggctt tgccggggtg aaaggtttcg
     3541 caggaggatt cggtcgcggc gcacttggcc cctggggcga accgctgatc aaacagttcg
     3601 tgcgtgaagc agtggatgaa gcgctgaagc tggaaaccgc cctgagc
//
LOCUS       DASRPQ010001451         1717 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2705407, whole genome shotgun sequence.
ACCESSION   DASRPQ010001451 DASRPQ010000000
VERSION     DASRPQ010001451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1717
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2705407"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..214
                     /locus_tag="VFD73_16570"
     CDS             <1..214
                     /locus_tag="VFD73_16570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75597.1"
                     /translation="RIMRWPCYVRDRHAARSRPTAGVLATAKIFNSEVLRPLSGIEYR
                     KLDFRDAQAKCVFEKGQRGRVTRSPV"
     gene            229..1071
                     /locus_tag="VFD73_16575"
     CDS             229..1071
                     /locus_tag="VFD73_16575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011020875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZI75598.1"
                     /translation="MHERSRRYPSDTSDEQWAVIEPLLPPVRTGGRPEKHPRRAVVDA
                     ILYVVRTGCAWRQLPADFPPWQTVYWYFNQWEQARVTENILPVVRAQLRVQEGRNPLP
                     SAGLIDSQSVKGADTVGRESRGYDAGKKVNGRKRFIVTDTLGLLLLVVVVLAASVQDR
                     DGAKSVLLDTYLRTPVRFVFADGGFAGRLLDWATQILRTTVHIVRKPAGQQGFAVIPR
                     RWAVERTFAWLTAHRRLARDYERDPAMSEAMIRWAAINTITRRIARGGPAIRQQRRTF
                     LAAV"
     gene            1150..1602
                     /locus_tag="VFD73_16580"
     CDS             1150..1602
                     /locus_tag="VFD73_16580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75599.1"
                     /translation="MQDIVYGLVFTKEGVEEHEEALAQLGLHIGLPTQRPEKTLAEGP
                     DVFWALSATEYWVIEAKSGSRTQRIHRGDANQLAGSMNWFRTRYGSIATATPVMVHKA
                     HKLADDASATPGMMVLDEQGLQRLKAAAISYAAGLAWIRGRTALVIGV"
BASE COUNT          316 a          530 c          561 g          310 t
ORIGIN      
        1 gaggatcatg cggtggccgt gctacgtccg ggaccgccac gccgcaagat cacgacctac
       61 ggctggagta ctagccacag ccaagatctt caactctgaa gttcttcgtc cgctgagcgg
      121 catcgaatac cggaagctcg acttccgcga tgctcaggct aagtgcgtgt ttgagaaggg
      181 tcagcgtggc cgcgtgaccc ggtcgcccgt gtgatccact gtggccgggt gcacgagcgc
      241 tctcggcggt acccgtcgga taccagtgac gagcagtggg cagtcatcga gccgttgctg
      301 ccgccggtgc gcaccggtgg gcggccggag aaacacccgc gccgggcggt cgtggatgcg
      361 atcttgtatg tggtgcggac aggctgtgca tggcgtcaac tacccgcgga tttcccgcct
      421 tggcagaccg tgtattggta cttcaaccag tgggaacagg ctcgcgtgac cgagaacatc
      481 ctgcccgtcg tgcgcgccca gctgcgcgtg caggaaggcc gcaacccgct gcccagcgcc
      541 ggactgatcg actcccagag cgtcaagggt gccgacaccg tcgggcggga gtcccgcggc
      601 tacgacgcgg ggaagaaggt caacggccgc aagcggttca tcgtcaccga caccctcggg
      661 ctgctgctgc tggtcgtcgt cgtattggcc gcctccgtgc aagaccgtga cggcgccaag
      721 tcggtgttgc tcgacaccta cctgcgcacg ccggtgcggt tcgtgttcgc cgacggcggg
      781 ttcgcagggc gactgctcga ctgggccacc cagatcctgc gcaccaccgt tcacatcgtg
      841 cgcaagcccg caggccagca gggcttcgcg gtgatccctc gccggtgggc cgtggagcgc
      901 accttcgcct ggctgaccgc gcaccgccgc ctggcgcgcg actacgaacg tgacccggcc
      961 atgtccgaag ccatgatccg atgggcggcg atcaacacca tcacccgccg tatcgcccgc
     1021 ggaggtcccg cgatccggca gcaacgacgc acctttctgg ctgccgtttg atcttctcaa
     1081 acacgttcta agcgatcggc cgactttttg tatggcaggt acactagcgc cgaggaactt
     1141 cgcctggcag tgcaggacat cgtctatggc ctggtgttca ctaaggaggg cgttgaggag
     1201 catgaggagg ctttggctca gcttggactg cacattggtt tgcccacgca gcgaccagag
     1261 aagacgctcg ctgaagggcc tgatgtattt tgggcgctca gtgcaacgga gtactgggtc
     1321 attgaagcta agagtggttc ccgcacgcaa cggatccacc ggggtgatgc aaaccagctg
     1381 gctggatcaa tgaactggtt ccggacccgc tacggaagca ttgcaacagc aacacctgtt
     1441 atggtgcaca aagcccataa gctcgcagat gacgcatctg ctacgccagg gatgatggtc
     1501 ttggacgagc agggcctgca gcgcctcaag gcagcggcga tcagctacgc agctggctta
     1561 gcctggatcc gtggacgaac ggcgctggtg atcggcgtgt gaacgaagga agtgcccctt
     1621 gagctgggac gataggtgtt cctaggcaca gatcaacccg gctcagaagg gcacttcgag
     1681 tgcgagtgtc gcataggttc accgctggct ccgcgcg
//
LOCUS       DASRPQ010001452         1058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_791018, whole genome shotgun sequence.
ACCESSION   DASRPQ010001452 DASRPQ010000000
VERSION     DASRPQ010001452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_791018"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..624)
                     /locus_tag="VFD73_16585"
     CDS             complement(<1..624)
                     /locus_tag="VFD73_16585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HZI75600.1"
                     /translation="MLKHWKALPSNVRWLVGGVLAAVVLVLVVAWVLFVPTADWLAHH
                     DVGSAQGRLLQAARDAARGRLLTFATGLFAVGALVFTALTFNLSRQGQYTDRFTKAIE
                     QVGSKEVDVRVGGIYALERVARDSRRDHPTVIEVLCAFVREHSNLKLPPPDPATQGLE
                     RFGRRDIQAAITVVGRRDVKRDTRPLHLARADLRGTNLRNGNLSGANL"
     gene            750..>1058
                     /locus_tag="VFD73_16590"
     CDS             750..>1058
                     /locus_tag="VFD73_16590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75601.1"
                     /translation="MAGPPPASIVSVTPSWLRSSMITAVSGLGVSELAASMLWGMAVL
                     PLADTWEVFRAVCKDEAALRPGVDQLCRLLGVNAVSLSRFAGGSRPVYAAGDLVLKLY
                     P"
BASE COUNT          172 a          329 c          355 g          202 t
ORIGIN      
        1 gaggttcgcg ccgctaaggt tcccattcct gaggttcgtt cccctgaggt ccgcacgggc
       61 gaggtgaagt ggccgggtgt cgcgcttcac atcccggcgc ccgaccacgg tgatggcggc
      121 ctgaatgtcc cgccgtccga atcgttccag tccctgggtg gcgggatccg gcggcggtag
      181 cttcagattt gaatgctcgc ggacgaatgc gcaaagcact tcgatgacgg tggggtggtc
      241 tcttcgggaa tcgcgggcga cgcgttccag cgcatagatg ccgccaaccc gcacgtcgac
      301 ctctttggac ccgacctgct cgattgcctt ggtaaaacgg tcggtgtatt gcccctgacg
      361 cgacaggttg aaggtgaggg cggtgaagac cagcgcccca acggcgaaca gtcccgtggc
      421 aaaggtcagc aaccggcccc gcgcggcgtc ccgtgccgcc tgtagcagcc gtccctgggc
      481 tgagccgacg tcatgatgcg cgagccagtc cgccgtcggc acgaacagca cccacgcgac
      541 caccagcacc agcacaacgg cagcgagtac gccgcctacc agccaccgaa cgttgctcgg
      601 cagagccttc cagtgcttca gcataagcaa acgctagacg atgtcgctct tgatacggaa
      661 tagggcgaca gccaagggcc tgctgggata atcagcgtgc gtgttagctg gcctcgtcgg
      721 tctcggtccc aagtcaaggg ctccgctgat tggccgggcc gccccccgca tcgatcgtct
      781 cggtcacgcc cagctggctg cgcagctcga tgattacggc cgtctccggg ttgggagtca
      841 gcgagctggc agcaagtatg ctctggggca tggctgtgct gccgctggca gatacctggg
      901 aggttttccg ggctgtctgc aaggacgagg cggcgctgcg tcctggggtc gatcagctgt
      961 gccggttgct gggtgtgaat gccgtgagct tgtcgcggtt cgcggggggt tcgcggcctg
     1021 tatatgcggc cggtgatctg gttctcaagc tctatcct
//
LOCUS       DASRPQ010001453         1041 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4561353, whole genome shotgun sequence.
ACCESSION   DASRPQ010001453 DASRPQ010000000
VERSION     DASRPQ010001453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4561353"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(154..558)
                     /locus_tag="VFD73_16595"
     CDS             complement(154..558)
                     /locus_tag="VFD73_16595"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE family protein"
                     /protein_id="HZI75602.1"
                     /translation="MKIKKRTTTDEGQAVVEFAVILPVLLLVLFAILQFGVLFNNYIQ
                     VTAAAREGARKAATSRTLGVAGAESAATAAAKSAAPGLNSSNMGITYPNSPTFIQGSD
                     VKVQVTYPYSISIIGLVVSSGNLTASTTMRVE"
     gene            complement(654..833)
                     /locus_tag="VFD73_16600"
     CDS             complement(654..833)
                     /locus_tag="VFD73_16600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75603.1"
                     /translation="MNSLIEYLSRLFADLKEESGQTMAEYAVVLGVITIAVVVTLGLL
                     STKISAVLNSVIAAM"
BASE COUNT          190 a          313 c          346 g          192 t
ORIGIN      
        1 cagcaccagg aacagcaccg gcgcgaccag cgcgaactcc accatcgcct gtcccgagga
       61 acggccggcg gcccgacgtg gtcgggccgg ggttggctga gcctttgtgt gcgggggacg
      121 gatcatcagg caggtgggtt caaagcgttt gcgttactcg acccgcatcg tggtcgaagc
      181 ggtcagattg ccggacgaga caaccaggcc gatgatgctg atcgaatacg ggtaggtgac
      241 ctgcaccttc acgtccgagc cctgaatgaa cgtcgggctg ttgggatagg tgatccccat
      301 gttggacgag ttcagccccg gcgcggccga cttggcggcg gcggtggcgg cactctcggc
      361 gccggccact cccagcgtgc ggctggtggc cgccttgcgc gcaccctcgc gggcggcggc
      421 cgtcacctgg atgtagttgt tgaagagcac tccgaactgc aggatcgcga acagcaccag
      481 cagcagcacg ggaaggatga cggcgaactc aacgaccgcc tggccttcgt cggttgtggt
      541 gcgtttcttg atcttcacgg agctcccaga ccctgggtga cgtgtgcggg ggacaaaagt
      601 aggcgggctc ccgggacact gaggacccgg gaacccgccg agggaagcca taattacatg
      661 gcggcaatca cgctattgag aacggcggag atcttggtgc tcaggaggcc gagggtgacc
      721 accacagcaa tggtgatgac gccgagcacg acggcatact cagccatcgt ctggcccgac
      781 tcctccttga gatccgcgaa caggcggctc aggtactcga tcaaggaatt cacctccccc
      841 catccagttt ctcggagccg ccgcgggagg cggatcctgt tcgatctgtt tcggcagatg
      901 ccatggagcc ttgagggctt actggcgatt tcccctgttt gggggaactg ccgtcgtaga
      961 cgtgtaactc actgataggc gctcgcccgc tgcgctggta tcacccgttg ggatgctttc
     1021 tgctcccgag aattcgctat g
//
LOCUS       DASRPQ010001454         1178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2070363, whole genome shotgun sequence.
ACCESSION   DASRPQ010001454 DASRPQ010000000
VERSION     DASRPQ010001454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2070363"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(18..845)
                     /gene="ppk2"
                     /locus_tag="VFD73_16605"
     CDS             complement(18..845)
                     /gene="ppk2"
                     /locus_tag="VFD73_16605"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR03707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006793 - phosphorus metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HZI75604.1"
                     /translation="MDTWREEYPYTERLSRDEYDHAKRALQVELLKLQYWVQDSGSRI
                     VVVFEGRDAAGKGSTIKRFMEHLNPRNARVVALSIPTERERGQWYFQRYIEHLPTAGE
                     IVFFDRSWYNRAGVEKVMGFCTEEQHEAFLQQVPQFERLLIHEGISLTKFWFSVTPGE
                     QHTRFAIRQIDPVRQWKLSPTDIALLDKWDAYTAAKVTMFQRTDTTEAPWTVIKSNDK
                     KRARLAAMRSLLAGIDYDRKDPDVVGQPDPLIVGAPADMRELDASQLSPTPFRQRIR"
BASE COUNT          201 a          403 c          340 g          234 t
ORIGIN      
        1 cgttgagcct tgccgcgcta tctgatcctt tgccggaacg gcgtggggga caactggctg
       61 gcatccagtt cccgcatgtc cgcaggagca ccgacgatca gcgggtctgg ctgcccgacg
      121 acgtccgggt ctttgcggtc gtagtcgata ccggcgagca ggctgcgcat cgccgccagc
      181 cgggcgcgct tcttgtcgtt gctcttgatc accgtccagg gcgcctcggt cgtgtccgtg
      241 cgctggaaca tcgtgacctt ggccgcggta taggcatccc acttgtcaag cagcgcgatg
      301 tcggtagggc tgagcttcca ctgccgcacc gggtcgatct gccggatggc gaaccgggta
      361 tgctgctcgc cgggggtcac ggaaaaccag aatttggtta gagaaatgcc ctcgtgaatc
      421 agcagccgct caaactgagg cacctgctga agaaaggcct catgctgctc ttctgtacag
      481 aatcccatga ccttttcgac gccagcacga ttataccagg aacggtcgaa gaagacgatc
      541 tccccggccg tcggcaagtg ctcgatgtaa cgctggaaat accattgccc ccgctcgcgc
      601 tcggtcggga tagaaagtgc gactacccgc gcgttacggg gattcagatg ttccatgaaa
      661 cgctttatgg tactgccctt gcccgccgcg tcacggccct caaagaccac tacaatgcgg
      721 ctgcccgaat cctggaccca gtattgcagc ttcagcagtt ccacctggag tgcgcgcttc
      781 gcgtgatcgt attcatcccg gctcagccgc tcggtgtagg gatactcttc gcgccaggtg
      841 tccaccaggc tcccatcagc cctgcggagc accgggtcat cctcgtcgga atcatccacc
      901 cacacccccg gcgggaccac gctcttgcca tccggccggt ccgcgccaga gtgacctgcg
      961 tgggcttgcc gtccttcgct catatcgggc cccatccagc tcctgaccac gccccaccag
     1021 gggtccgcgg accagttacg ccgctaccat ggccccgccg caggtttcac cgggaattca
     1081 ccgcctgggc gcgctcgcgc actcggccgt tcgcgcgccg ccaggccccg ttgccatgcc
     1141 gggagccagc tctattcgct tctgcttcaa atgatact
//
LOCUS       DASRPQ010001455         1213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_173052, whole genome shotgun sequence.
ACCESSION   DASRPQ010001455 DASRPQ010000000
VERSION     DASRPQ010001455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173052"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..892)
                     /gene="rapZ"
                     /locus_tag="VFD73_16610"
     CDS             complement(<1..892)
                     /gene="rapZ"
                     /locus_tag="VFD73_16610"
                     /inference="COORDINATES: protein motif:HMM:NF003828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HZI75605.1"
                     /translation="MNDSRLRVVLVTGLSGGGKRSVMHELEDLGYEAVDNPPLPMLEE
                     VVSRSDQRLAIGVDARTRGFDADEVLQALKRLQVDRALRLALVYAWADETTLLRRYTE
                     TRRRHPLAPQGRVVDGIARERAVTEPLREAADLVIDTSDLPLASLRRLIDFHFGTGSE
                     AQESRLVVSLISFAYKMGLPREADLVFDSRFLRNPHYDPILRPRTGLDPEVGAYIEQD
                     PDLPAFFAKMADLIELLLPRFVQEGKKYAAITIGCTGGRHRSVYLVERLAKHLADKIA
                     MAEVSGADGLGWRLHVTHREL"
     gene            complement(889..>1213)
                     /locus_tag="VFD73_16615"
     CDS             complement(889..>1213)
                     /locus_tag="VFD73_16615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75606.1"
                     /translation="ARGFDLVSDDRTEIEDGLARPVPALAGLLEVRGLGIVRVPHTAS
                     ARLALVAQLGQPLARMPSLTRNGDLGLPVVTIDPLVASAPERVSLALDCALGQVAQLV
                     GAFAA"
BASE COUNT          234 a          415 c          361 g          203 t
ORIGIN      
        1 ccagctcgcg gtgcgttaca tgcaaccgcc agcctagccc atcagccccc gacacctccg
       61 ccatagcgat cttgtccgcc aggtgcttcg ctagcctttc caccaggtag acggagcgat
      121 gccggccacc tgtacacccg atcgtgatcg ccgcatactt cttgccctcc tggacgaacc
      181 tgggcaagag caactcgatt agatcagcca ttttggcgaa gaatgccggg aggtcggggt
      241 cttgctctat ataagcaccg acttccgggt cgagcccggt tcgcggccgt aagatgggat
      301 cgtagtgcgg gttccgcaaa aagcgggaat cgaataccag atctgcttcc cgcggcaggc
      361 ccatcttgta agcaaacgag atcagtgaga ccaccagacg gctttcctga gcctcgctgc
      421 ccgttccgaa atgaaagtcg atcagtcgtc gcaaggacgc cagcggcagg tcagaggtgt
      481 cgatcaccaa atcagcggct tcccgcaggg gctcggtgac ggcccgctcg cgggcaatgc
      541 catcaaccac ccggccctgc ggcgccagcg gatggcgccg ccttgtctcg gtgtagcgac
      601 gcagcagggt ggtttcgtcc gcccaggcat agaccagcgc gagccgaagg gcgcggtcga
      661 cctgcaagcg cttcagcgcc tgcaacacct catccgcatc aaagccacgc gttcgcgcgt
      721 cgacgccgat cgcgagcctt tggtcgctgc gactgaccac ttcctccagc atcggcagtg
      781 gcgggttgtc cactgcctcg tacccgaggt cttccagttc gtgcatcacc gagcgtttgc
      841 cgccgcccga caggcctgtc accagcacca cgcggaggcg gctatcgttc acgctgcgaa
      901 tgccccaaca agctgtgcca cctgacccag ggcacaatcg agcgccaggc tgacacgctc
      961 tggcgccgaa gcgacaaggg gatcgatcgt caccacgggc aggccaaggt ctccgtttcg
     1021 ggtgaggctg ggcatcctcg ccaatggctg gcccaattgc gcgaccaatg caagccgcgc
     1081 cgatgcggta tgtggcacgc ggacgatccc cagcccgcgc acttcgagca aacccgccaa
     1141 tgccgggaca gggcgggcta ggccgtcctc aatctcggtc cgatcgtccg agaccagatc
     1201 aaagccgcgg gca
//
LOCUS       DASRPQ010001456         1211 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4234590, whole genome shotgun sequence.
ACCESSION   DASRPQ010001456 DASRPQ010000000
VERSION     DASRPQ010001456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1211
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4234590"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..244)
                     /locus_tag="VFD73_16620"
     CDS             complement(<1..244)
                     /locus_tag="VFD73_16620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75607.1"
                     /translation="MIHNLAEEIPTAIPLKPHDDLWPIPEAAWWQSGDFYRKFARAFA
                     DIARDIEDGHEPDPHNVAEGIALHLALDAAAGSSLMK"
     gene            complement(241..771)
                     /locus_tag="VFD73_16625"
     CDS             complement(241..771)
                     /locus_tag="VFD73_16625"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZI75608.1"
                     /translation="MDAHRDRFGVEPVCAVLEFPVSSYYYAKKREAEPAVREVRDAGL
                     KEKIMEVWAGEKGRKVYGARKIWLELNSQGVAVARCTVERLMRELGICGASPGRKRPP
                     TTLPGDPADRPCDLLERCFDAAAPNRRWVADITYVQTFSGWVHTVVAMDLFARAILSW
                     QVADHLRSDLALDALT"
     gene            complement(780..1100)
                     /locus_tag="VFD73_16630"
     CDS             complement(780..1100)
                     /locus_tag="VFD73_16630"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI75609.1"
                     /translation="MAAQKKYPDELRERAMKMVFEIRERDGKGHGELARVGRQLGVHP
                     EALRSWVKQAEIDGGERPGITTGDSQRIAELEREVRELRRANEILKAASAYFARELDP
                     RLPR"
BASE COUNT          218 a          455 c          328 g          210 t
ORIGIN      
        1 ccttcatcag cgatgaccca gctgcggcgt cgagcgctag atgcaaagcg atcccttcgg
       61 ccacgttgtg tgggtctggc tcatggccat cctcgatatc ccgggcaatg tctgcgaatg
      121 cccgggcgaa cttacgatag aaatccccgc tctgccacca ggcggcctcg ggaataggcc
      181 acagatcgtc gtgaggtttg agcgggatcg cagtcgggat ttcttcggct aggttgtgga
      241 tcatgtcagc gcatcgagag caagatcgga acggagatga tcagcgacct gccagctgag
      301 aatcgcccgg gcaaacaaat ccatcgcgac aacggtatga acccagcccg aaaacgtctg
      361 gacataagtg atgtccgcca cccaccggcg gttcggcgcc gccgcgtcaa agcaccgctc
      421 cagcaggtca cacggccggt ccgcgggatc acccggcaac gtcgtcggcg gccgcttccg
      481 ccccgggcta gccccgcaga tccccagctc gcgcatcagc cgctcgaccg tgcaccgcgc
      541 caccgcaacg ccctggctat taagctccag ccagatcttc cgcgcaccgt aaaccttacg
      601 gcctttctcc ccggcccaca cctccatgat cttctccttc aggcccgcgt cacgcacttc
      661 ccgcacggcc ggctccgcct cgcgtttctt cgcgtagtaa tacgacgaca cgggaaactc
      721 aaggaccgcg cagaccggct cgacgccgaa ccggtcccgg tgcgcgtcga tgaacccgac
      781 tagcgcggaa gcctggggtc gagttcccgc gcgaaatacg cactggcggc cttcaggatc
      841 tcattcgccc ggcgcagctc gcgcacttcc cgctcaagct ccgcgatccg ctgactatca
      901 ccagtcgtga taccaggccg ctcgccgccg tcaatctccg cctgcttcac ccacgaccgc
      961 aaagcctccg gatgaacacc cagctgacgc ccgacccggg ccagctcccc atgccccttc
     1021 ccgtcccgct cccggatctc gaacaccatc ttcatcgcgc gttcacgcag ctcgtccggg
     1081 tacttcttct gtgctgccat ggccctgcat cctcccagga atcagagcct ccaagattcc
     1141 cggggtggtc cagcctgcct ggcacttcag gccctgccgc cgcagccggg cgagtggttc
     1201 caccgtgctc g
//
LOCUS       DASRPQ010001457         1186 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_476885, whole genome shotgun sequence.
ACCESSION   DASRPQ010001457 DASRPQ010000000
VERSION     DASRPQ010001457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_476885"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..498
                     /locus_tag="VFD73_16635"
     CDS             <1..498
                     /locus_tag="VFD73_16635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75610.1"
                     /translation="SRGRQFDPTVELSPAAPWARPDSHWMRISCYAESLRRYLALFPR
                     TRLHVLLFDELRRAPVEAVQSVYRFLEVDPGFVPDLETPHNIGGIPASRTLERLFTSE
                     RLQAAIRPWIPTQAVNWVRRVRTRNLRAAPPLPAELKRELTAHFREDITQTSELIGRS
                     LEHWL"
     gene            820..>1186
                     /locus_tag="VFD73_16640"
     CDS             820..>1186
                     /locus_tag="VFD73_16640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75611.1"
                     /translation="MHEPGSFSIGSPAANADRGFLESPPADVRGRRIRYVCMPGSPYT
                     GSTLLGSILNRHPACASIGAATGLSRIVELPTYHCSCGKLFTECEFWSQIADRTAELG
                     HPVDVYQTGFWNTQLRVSRN"
BASE COUNT          188 a          422 c          362 g          214 t
ORIGIN      
        1 agtcggggcc ggcagttcga tccgacggtc gagctctcgc ccgccgcacc atgggcccgt
       61 ccggactcgc actggatgcg catcagctgc tacgccgagt cgctgcggcg gtatctcgcc
      121 ttgtttcctc ggacccggct ccatgtcctg ctgttcgacg agctcaggcg cgccccggtg
      181 gaagcagtcc agagcgtgta tcggtttctt gaggtcgatc ccggcttcgt acccgacctc
      241 gagaccccgc acaacatcgg cggcatcccg gcgagccgca cgctggaacg cctgttcacc
      301 agcgagcgcc tccaggcagc gattcggccc tggattccga ctcaggccgt caactgggtg
      361 cgacgggtcc ggacccgaaa ccttcgcgcc gccccgcccc tgcctgccga gctcaaacgg
      421 gagctcaccg cgcacttccg cgaagatatc acgcagacct ccgagctcat cgggcgcagc
      481 ctggagcact ggctctagcc ctctggcgaa ccgcctggcg gttcattgct gcaggagggc
      541 acccacgaat agattccccc cgcacttgcg aaggctaagc ccgtcggcca ccgccgtgcg
      601 aacattgcgt atgagaagga cttacgccgg ccctgtggac cgagcgcgga cctcgggctg
      661 caggagctag gcgcgttaca gggcatggat tctgctgcca gttccgcggc tcctccagcc
      721 ctgtcacccg gtaccggccg aacgaggcag ggggcctttt cgtcccgccg aatggtgccg
      781 ccgaagcctt tgaaccgtgg tctcgaaagg gtcgcacccg tgcacgaacc gggctcgttt
      841 tccatcggta gccctgctgc gaatgccgat cggggatttc tggagagccc gcccgcggat
      901 gtgcgcggcc ggcgcattcg ctacgtgtgc atgccgggta gcccgtacac cggatcgacg
      961 ctgctcggct ccatcctcaa tcgtcatccg gcctgcgctt ccatcggtgc cgcgaccggg
     1021 ctcagccgca tcgtcgagct ccctacctat cactgctcat gcggcaagct gttcaccgaa
     1081 tgcgagtttt ggagccagat cgcggatcgg accgccgagc tcggccatcc ggtcgacgtc
     1141 taccagaccg gattctggaa tacccagctt cgggtttccc ggaatc
//
LOCUS       DASRPQ010001458         1208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1756970, whole genome shotgun sequence.
ACCESSION   DASRPQ010001458 DASRPQ010000000
VERSION     DASRPQ010001458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1208
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1756970"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..321
                     /locus_tag="VFD73_16645"
     CDS             <1..321
                     /locus_tag="VFD73_16645"
                     /inference="COORDINATES: protein motif:HMM:NF014312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome D1 domain-containing protein"
                     /protein_id="HZI75612.1"
                     /translation="PFSKDAKPMGVRVSPDGHRVYVATGRGGTVEVIDAATNKIVGSV
                     KVGQRPWGIALTHDGKKLYTANGPSNDVSVVDTDKLTVSATVPVGKIPWGVAIGPAPA
                     GSRK"
     gene            318..812
                     /locus_tag="VFD73_16650"
     CDS             318..812
                     /locus_tag="VFD73_16650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75613.1"
                     /translation="MTRGVCLLGLLPLLLGADQAPHIPSAFRFELDATPELHRLWEAS
                     SAAKAERVACLAAVIESDTVRISRVVPLESGRSDSLGISAEASLEQCGPPQWRGTVHT
                     HIALQDGRRPYSIFSGADRGVMMLWWTRWNLDGVFCLLYSANEVICEIEGPEGAVIFP
                     RSRY"
     gene            809..>1208
                     /locus_tag="VFD73_16655"
     CDS             809..>1208
                     /locus_tag="VFD73_16655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75614.1"
                     /translation="MNRALLAIVLPVVMAAGAVASQANAQTGRAPHGTFRFSHEAGLG
                     LQALWQESIATRQERVACMASTIRNDTVFVTRIAMVKSEEADSLGISARASVEQCGPP
                     AWSGTVHTHIALYSDSLPSTRFSAQDRAAMR"
BASE COUNT          206 a          370 c          414 g          218 t
ORIGIN      
        1 ccgttctcca aggacgccaa acccatggga gtgcgggttt cacccgacgg acaccgggtc
       61 tacgtggcca ccggacgcgg agggaccgtt gaagtcattg acgccgccac caacaagatc
      121 gtgggatcgg tcaaggtggg acagcggccg tggggtattg cgctcaccca cgacgggaag
      181 aaactctata ccgcaaacgg gccatccaat gatgtgagcg tggtggacac cgacaaattg
      241 acggtgagcg ctacggtacc ggtgggcaag attccgtggg gtgtcgcgat cgggccggca
      301 ccggcgggga gcaggaagtg acccgagggg tttgcttgct ggggctgctg ccgctcctgc
      361 tcggcgcgga ccaagcgcct catatcccca gtgcctttcg cttcgagctg gatgccacac
      421 ccgagctgca ccggctgtgg gaggcaagtt ccgcggccaa ggcggaacgg gtggcttgcc
      481 tggctgcggt gatcgagagc gatacggtgc ggatttcccg ggtcgttccc ctcgaatctg
      541 gacggtcgga ttcgctcggc atctccgccg aagcgtcgct ggaacagtgt ggcccgcctc
      601 agtggcgggg aacggtgcac acccatatcg cgctccagga tggacggcgg ccctattcca
      661 tcttttccgg agccgatcgc ggcgtaatga tgttgtggtg gacgcgctgg aacctggacg
      721 gtgtcttctg cctgttgtac agcgccaacg aggtgatctg cgagatcgag ggtcccgagg
      781 gcgcggtgat tttcccccgc tcacgatatt gaaccgagct ctgctggcca tcgtgctgcc
      841 ggtggtgatg gcggccggtg cggtggcctc gcaggccaac gcccagactg ggcgggctcc
      901 ccacggaaca tttcgattca gtcacgaggc gggcctcgga ctgcaggcgc tctggcagga
      961 gagcatagcg acgagacagg agcgggtggc gtgcatggcc agcaccatcc gaaacgatac
     1021 cgtcttcgtc actcggatcg ccatggtcaa gtctgaggag gccgactccc ttggcatttc
     1081 cgcccgggca tcggtggagc agtgcgggcc gccggcctgg tcgggaacgg ttcacaccca
     1141 catcgcgctc tactccgaca gcttgccctc cacccgcttc tcggcgcagg atcgggctgc
     1201 tatgcgcc
//
LOCUS       DASRPQ010001459         2435 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_174282, whole genome shotgun sequence.
ACCESSION   DASRPQ010001459 DASRPQ010000000
VERSION     DASRPQ010001459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174282"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1728
                     /locus_tag="VFD73_16660"
     CDS             <1..1728
                     /locus_tag="VFD73_16660"
                     /inference="COORDINATES: protein motif:HMM:NF013713.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75615.1"
                     /translation="LFLATSAAALGVLLLVGTGVRLDQNRLTSGVYRSGVILDSRHRE
                     VQFYRDGRTSTVTVARLNPSGIVSLATNGKVDASLTPSWYQSCDSVKKLEPLAHDAAT
                     QTLVPLVPLAYAPRARTAAIIGQGSGMSSHLLLGSPILQELVTVEIEPQMIAGSHMFY
                     PANRRVFDDRRSKIVIDDAKSYFASTQRKYDLIISEPSNPWVSGVSGLFTTEFYSRVR
                     GYLTDDGVFGQWLQVYELDDPMVLTVLAGIHQNFRSYEVYLAPNSDILVVASNRPTLP
                     RPDWSVFGYPALRKDLCSFVPLTPTALDGLRIAGRAELQPLLESMTQPNSDYYPVLDL
                     GAERRRFRQDHAAGFQGLSADWFNLLTSLTGQRTAPALDLTVALPENPRVRARALGAL
                     LRSGSNLTVPQDAPAVFQQGAFEWRAWQSMAASAEAPVNWDVWLQQAGRVDYLRNAGT
                     AGFVDPQFYAELNRFMDRHHAPAEVRDVVQFRHGLASWDFAEAAAAGDRLLPLISTDR
                     LMIPVDELRDGLVIAKLHQRDVAGARRAFDGLFRFSRRPATDVRSQLLMSYVQTGERL
                     QPLALQRHP"
     gene            complement(1763..>2435)
                     /locus_tag="VFD73_16665"
     CDS             complement(1763..>2435)
                     /locus_tag="VFD73_16665"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HZI75616.1"
                     /translation="AARGGSFFLDEVGEMPASLQVKLLRVLQEREAIPVGATEPIPVD
                     VRIIAATNRDLEEEIRRGNFRSDLFYRLNVIAINLPALRERRDDLLLLIEALLQNLAS
                     ETGTDPKALAAEALDAVMVYEWPGNVRELENALEHAVVLTRGGLIEAASLPERITKRR
                     KEPLVAERSYRNPTLEVIERAYIMWVLQAEGGNKTRAAEVLGIDPSTLYRKLSRYEEQ
                     VEVKV"
BASE COUNT          395 a          810 c          755 g          475 t
ORIGIN      
        1 cttttcctgg cgaccagtgc tgccgcacta ggagttctgc tgctggtggg gaccggggtt
       61 cgactggatc aaaaccggct caccagcggc gtctaccgca gcggagtgat cctcgattcg
      121 cggcatcgag aggtccagtt ctaccgggac ggccgcacct ccaccgtgac ggtggcgcgg
      181 ctaaacccat ccggtatcgt ctcgctggcc accaatggga aggtcgacgc ttctctgacg
      241 ccctcctggt accagtcgtg cgattcggtc aagaagctgg aaccgctcgc gcatgatgct
      301 gcgacgcaga cgctggtccc gctggtcccg ctcgcctatg cacctcgcgc gcgcaccgcc
      361 gcgatcatcg ggcagggctc cggaatgtcg tcgcacctcc tccttggaag tcccatcctc
      421 caagagctgg tcaccgtgga gatcgagccg cagatgatcg ctgggtccca catgttctac
      481 cccgccaatc gccgagtctt cgacgatcgc cgctccaaga tcgtcatcga tgacgccaag
      541 tcgtacttcg cgtccaccca gcggaaatac gatctcatta tctccgagcc gtcgaaccca
      601 tgggtcagcg gggtatcggg actgttcacc acggagttct actccagggt tcggggatat
      661 ctgaccgacg acggcgtatt cggccaatgg cttcaggtgt acgagctgga cgacccgatg
      721 gttctcaccg tcctcgccgg tattcaccag aacttccgtt cctacgaggt ctacctcgcg
      781 cccaattcgg atatcctggt ggtcgccagc aatcgtccga ccttaccccg gcccgattgg
      841 tcggtgttcg gctatcccgc gcttcgcaag gacctgtgca gcttcgttcc actgacgccg
      901 accgccctgg acggactgcg catcgccggc cgtgccgagc tccagccgct gctcgagtcg
      961 atgacccagc cgaactccga ctattacccg gtactggatc tgggtgcgga gcggcgccgc
     1021 ttccgtcagg atcacgccgc cgggttccag ggactgtcgg ccgactggtt taacctgctc
     1081 acctccctga ccggtcagcg taccgcgccg gcgctggatc tgacggtggc gctccccgag
     1141 aacccacggg tacgtgcgcg ggcgctcggt gcgctgctca ggtccggaag caatctgacc
     1201 gtgccacagg acgccccggc ggtgttccag caaggcgcgt tcgagtggcg ggcctggcag
     1261 agcatggccg cctcggccga ggcgccggtc aactgggatg tttggctgca gcaggcaggg
     1321 cgagtggatt acctacgcaa tgcggggacc gcggggttcg tggacccgca gttctatgcc
     1381 gaactgaatc gtttcatgga tcggcaccat gcgcccgcgg aggttcggga tgtcgtgcag
     1441 ttccgtcacg gtctggcatc ctgggatttt gctgaggccg cggctgcggg cgatcgtctc
     1501 ttgccgctga tcagcacgga tcgattgatg atcccggtgg acgaattgcg ggacgggctg
     1561 gtcattgcca agctgcatca gcgagacgtg gccggggcac ggcgagcgtt cgacgggctg
     1621 ttccggttca gccgccgccc ggcgacggat gtccgttctc agttgctcat gtcctacgtt
     1681 cagacggggg agcggctcca gccgctggca ttgcagagac atccgtagcc gcctcatcgg
     1741 tcagggcgca cattgctgcg ccctagacct tcacctccac ctgttcctcg tagcggctca
     1801 acttccggta gagcgtcgag ggatcgattc caagcacttc ggcggcccgg gtcttgttgc
     1861 cgccttcggc ctgcaggacc cacatgatat acgcccgttc gatgacctcg agcgttggat
     1921 tgcggtagga gcgctccgcc accagcggct ccttccgccg tttggtgatt ctttccggca
     1981 acgaggccgc ttcgatcaat ccaccccgcg tcaggacgac ggcgtgctcc agcgcgttct
     2041 ccagctcccg gacgttgccc ggccattcgt agaccatcac ggcgtccagc gcctcggccg
     2101 ccaaagcctt cggatcggtg ccggtctcgg aggcgagatt ctgcaacagt gcctcgatca
     2161 agagcaggag gtcgtcccgg cgctcccgca gcgccggcaa attgatggcg atcacattca
     2221 gccgatagaa gaggtcggag cggaagttgc cccggcgtat ctcctcctcg agatcgcggt
     2281 tggtagcggc aatgattcgc acatccacgg gaatcggctc cgtggcgccg accgggatcg
     2341 cttcgcgctc ctgcagcacc cgaagcagct tgacctggag cgaggccggc atttcgccca
     2401 cttcgtcgag gaaaaagctt cctcccctgg cagcc
//
LOCUS       DASRPQ010001460         1009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3636664, whole genome shotgun sequence.
ACCESSION   DASRPQ010001460 DASRPQ010000000
VERSION     DASRPQ010001460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3636664"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(30..332)
                     /locus_tag="VFD73_16670"
     CDS             complement(30..332)
                     /locus_tag="VFD73_16670"
                     /inference="COORDINATES: protein motif:HMM:NF022150.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein"
                     /protein_id="HZI75617.1"
                     /translation="MNAERQRQIASMGGKAVPDEKRSFSQNRRLAAEAGRKGGQSVPG
                     AKRSFSQNRELAATAGRKGGQSVPDEKRSFSQHPELAAEAGRKGGQASHGGATRPA"
     gene            complement(554..>1009)
                     /locus_tag="VFD73_16675"
     CDS             complement(554..>1009)
                     /locus_tag="VFD73_16675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75618.1"
                     /translation="EQQITAIDEKLAGAAGSTAAVQQVQPRKPDSTPMGPQQGTPVVR
                     VNVTLAPSLASAAGAAPLFVFVRDPSQAGPPLAVKRLESHFPQSVELSPADSMVPGLA
                     FSPGQSVQVVARIARSGSPKAASGDPFGEVSYKVGSDGEVSLVINRLTP"
BASE COUNT          175 a          321 c          312 g          201 t
ORIGIN      
        1 cccacattct gtcgtgggcg agagcgagtt caggctggac gagtagctcc gccgtggctc
       61 gcctggccgc ctttgcggcc cgcctcggca gcaagctcgg gatgctgcga gaagctgcgc
      121 ttctcatccg gtacgctctg accgcctttg cgtcctgcag tcgctgccag ctcgcggttc
      181 tgcgagaagc tgcgctttgc gcccggtacg ctctggccgc ccttgcggcc agcttccgcg
      241 gcgagacgac ggttctgaga gaaactgcgt ttctcatccg gcaccgcctt gccgcccatg
      301 ctggcaatct ggcgctgccg ctcggcgttc atggaagcga aaccacgatg cgaaattcgc
      361 ccttcattca ctgttccttc agccattact gctctccttc agactcgcgg gcccggtgtc
      421 ccccgggcac tcaagtgtga tccggttcac aaaaaagggg ggtaaccgcg cagagcatac
      481 gcctcgaacg tgttatggaa catcagggga accctgagcg gtgcggtcag catccgccta
      541 ctttggtcgt gagtcagggt gtaagcctgt ttataaccag gctaacctcg ccgtcgctcc
      601 caactttgta actaacctct ccgaacggat cgccgcttgc ggccttgggg ctccctgaac
      661 gggcgattcg ggccaccacc tgaacgcttt gaccggggga gaaggcgagc ccgggaacca
      721 tcgagtccgc ggggctaagc tcaacacttt gaggaaaatg actctccaag cgcttgactg
      781 ccaagggagg tccggcctgg gaggggtcgc ggacgaaaac aaacagaggc gccgctccgg
      841 ccgcggaggc aagtgagggt gccaaggtaa cattgacccg taccacgggc gtgccttgct
      901 ggggccccat gggggtggaa tccggctttc gaggctgaac ctgttgcacc gcagcggtcg
      961 atccggcagc tcccgccagc ttctcgtcga ttgccgtgat ttgttgctc
//
LOCUS       DASRPQ010001461         1432 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1757213, whole genome shotgun sequence.
ACCESSION   DASRPQ010001461 DASRPQ010000000
VERSION     DASRPQ010001461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1432
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1757213"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..337
                     /locus_tag="VFD73_16680"
     CDS             <1..337
                     /locus_tag="VFD73_16680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="serine/threonine protein phosphatase"
                     /protein_id="HZI75619.1"
                     /translation="QVQTGLPGGSLDQAESQLRQLLAEYLLPICPSPRATSPPGSPSP
                     RSGAPESGTTASPAPPTSSSPSASPPPGTSANGPANSAPAGPTTTPQTLTALPGPPLQ
                     PGIDCRTVA"
     gene            334..>1432
                     /locus_tag="VFD73_16685"
     CDS             334..>1432
                     /locus_tag="VFD73_16685"
                     /inference="COORDINATES: protein motif:HMM:NF013279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HZI75620.1"
                     /translation="MTTQLQPPVAVTPPLPTRRNAELLLLGFASLITVAALLIVEANQ
                     GRDLHWTAISYGLVFLIVFGSAHMAIRRFAPYTDPLLLPIVALLNGLGLVMIHRLDLV
                     TNQLSGRHHPSATQQMLWTLIGVVTFSLVVTFLKDHRQLARYGYVCGLVGLVLLVIPA
                     LLPASLSEQNGAKIWIRLPGFSIQPAEFSKILLLIFFSAVLIAKRGLFTSVGKHFMGL
                     TLPRPRDLAPLLAAWVISIGVMVFEKDLGTSLLLYTSFLVVVYLATQRFSWVGIGLVL
                     FAAGSVVAYYIFAHVRVRVQMWWDPFSDPDGSGYQMVQSLFSFATGGIFGTGLGNGQP
                     DTVPAASTDFIIAAFGEELGLVGLASILMLYT"
BASE COUNT          222 a          498 c          420 g          292 t
ORIGIN      
        1 ccaagttcag accggactgc cgggcggcag cctggaccag gccgaatccc aactgcggca
       61 actgctggcc gaatatctac tgccgatctg tccgtcgccg cgtgccacct ctccgcccgg
      121 ttccccgagc ccgcgcagtg gagcacccga atccggcacc acagcatctc cggcaccacc
      181 aacctccagc tccccgagcg ccagcccccc accgggcacg agcgccaacg gccccgcgaa
      241 ctctgcgccg gcaggtccga cgaccacgcc gcagacactg accgcgcttc ccgggccgcc
      301 acttcaaccc ggcatcgatt gccggacggt ggcatgacga cacagcttca gccgccggtc
      361 gcggtcacac ccccgttgcc tacccggcgt aatgccgagt tgttgcttct gggcttcgcc
      421 tcactgatca ccgtcgccgc gctgctgata gtcgaagcca accaaggacg cgacctgcat
      481 tggaccgcga tcagttacgg gctggtgttt ctgatcgtct tcgggtcggc gcacatggcc
      541 atccggcgct tcgcgcctta taccgatccg ctgctgttgc cgatcgtggc attactcaac
      601 ggccttggcc tggtgatgat tcaccggctc gacctggtca ccaatcagct cagcggtcgg
      661 caccacccca gcgcgacaca gcagatgctg tggacgctga tcggcgtggt gaccttctcg
      721 ctggtggtca cgttcctcaa agaccatcgg cagctggcgc gctacggcta cgtgtgcgga
      781 ctggtcggcc tggtcttact ggtgattccc gccctgttgc cggcatcgct gtctgaacag
      841 aacggcgcca agatctggat tcgcttgccc ggcttctcaa ttcagcccgc cgagttctcc
      901 aagatcttgc tgctgatctt cttctccgcg gtgctgatcg ccaagcgcgg cctgttcacc
      961 agcgtcggca agcatttcat ggggttgacg ctgccgcggc cccgcgacct cgcgcccctg
     1021 ttggcggcgt gggtgatctc aattggcgtg atggtcttcg aaaaagacct tggcacttcg
     1081 ctattgctgt acacgtcgtt tctggtggtg gtctacctcg ccacccaacg cttcagttgg
     1141 gtgggaatcg gattggtgct gttcgccgcg ggaagcgttg tcgcgtacta catcttcgcc
     1201 cacgttcggg tgcgggtgca gatgtggtgg gaccccttct ccgaccccga cggcagcggt
     1261 taccagatgg tccagtcgct cttcagcttt gccaccggcg gaatcttcgg cacggggctc
     1321 ggtaacggtc agccagacac ggtgcctgcc gcttcgaccg acttcatcat cgccgcgttc
     1381 ggcgaggagc tcgggctggt gggcctggcc agcatcttga tgctctacac ca
//
LOCUS       DASRPQ010001462         1885 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4235227, whole genome shotgun sequence.
ACCESSION   DASRPQ010001462 DASRPQ010000000
VERSION     DASRPQ010001462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1885)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1885)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1885
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4235227"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..940
                     /locus_tag="VFD73_16690"
     CDS             167..940
                     /locus_tag="VFD73_16690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75621.1"
                     /translation="MRIQIQLQIVADDDSVISEDEILHLDKGDDRLEAIGLSLGEAKA
                     LLAGIQERVVTAQAASFAARHRGCPVCGRARRSKGPSPIVFRTVFGTVPLASPRFHRC
                     RCQPAEPKTVSPLTALFTEHTAPELLYLETKWASLVSFELTAQLLNEILPLAGTAQAC
                     TVRRHLHRVAARHETELGAGPPGASKDAPAAGRPGPLGQDPIIVGIDGGYVRNWHDKK
                     RNFEVMVGKSLAPGRESRYFGLVRSQDGQPDRRLGAVLQ"
     gene            complement(974..1468)
                     /locus_tag="VFD73_16695"
     CDS             complement(974..1468)
                     /locus_tag="VFD73_16695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZI75622.1"
                     /translation="MRAATTTPVEPSGADLARLPDDGGLPQHYDGSASTLIVSRPAQC
                     SLTLRPAWPTAPQKGTFPGVLQTIRRLLIRPGCFRLERELPGGICTHGTSAPWQGTHN
                     APMESFFHSLKTEQVHHCDYQTRDEARRDIFEYIEVFYNRQRRHSTLGYLSPAQFELA
                     ALAA"
BASE COUNT          360 a          586 c          622 g          317 t
ORIGIN      
        1 cgatcgcccg gctccggttg accggccagg aggatgtcac tctcctttgc tcgcctgttc
       61 gaggaacatg atgggagcat gtcaaagcgt ggggaggtcg gggatggttt ccaatgccaa
      121 cagtggatag gctgctcctc cagcaatggc atcccatggg acgagcatgc gtatccagat
      181 ccagctccag atcgtcgccg acgacgacag cgtgatcagc gaggacgaaa tcctgcacct
      241 tgacaagggc gacgaccggc tggaagcgat cgggctgtcg ctgggcgagg ccaaggccct
      301 gctggccggc atccaggagc gcgtggtcac cgcccaggca gcgagctttg cggcccggca
      361 tcggggttgc ccggtctgcg gccgggcacg gcgcagcaag gggccgtccc cgatcgtctt
      421 ccgcaccgtc ttcggcacgg tcccgctcgc cagcccgcgc tttcaccgat gtcgctgcca
      481 gccggcggag cccaagacgg tcagcccgct gaccgcgctg ttcaccgagc acaccgcgcc
      541 ggaattgctc tatctggaga ccaaatgggc gtcgctggtg tccttcgagc tgactgccca
      601 gctgctgaac gagatcctgc cgctcgccgg caccgcccag gcctgcacgg tccgccgcca
      661 cctgcatcgg gtcgccgccc ggcacgagac cgaactcggc gccgggcccc cgggcgccag
      721 caaggacgct cccgccgcgg gtcggccggg accgctcgga caagacccga tcatcgtcgg
      781 catcgacggc ggctatgtcc ggaactggca tgacaagaaa cgcaacttcg aggtcatggt
      841 cggcaagtcc ctggccccgg gtcgtgaaag ccggtatttc ggcctggtcc gcagccagga
      901 tggccagccc gaccgccggc ttggcgcagt tctgcagtga tcttcccccg atctggcgga
      961 caccgatgtt agctcacgct gccagtgccg caagctcgaa ctgggccggg ctgagatagc
     1021 ccagcgtcga atgccgccgc tgacgattgt agaagacctc gatgtactcg aagatgtcgc
     1081 gccgggcctc atcgcgggtc tggtagtcgc aatgatggac ctgctcggtc ttcagggaat
     1141 ggaagaagct ctccatcggc gcattgtgtg tgccttgcca aggtgcactg gttccgtggg
     1201 tgcaaatccc acccggcaac tctcgctcca gccggaagca cccggggcgg atcaggaggc
     1261 gacgaatggt ctgaagcact ccaggaaaag tccccttctg gggggcagtg ggccatgcgg
     1321 gccgcagcgt gagcgaacac tgagcaggcc tcgaaacaat caatgtggaa gccgacccgt
     1381 cataatgctg gggaaggccg ccgtcgtcgg gcaagcgagc gagatccgca cccgacggtt
     1441 ccaccggggt agtggtggca gcacgcatgg cagagaacca gtgcgcaaca agggaagtct
     1501 gtttcggcga cctcggctgg caagccggct ggtcaacggc gaacccgcga gggccagcgc
     1561 cggccggggc agatggcgga tgggtccgta ctaccgttga ggccgggtaa tgccggcgga
     1621 gggaaggggc cctgacctgc gacaggtgag gaaagtggca agacctcggg gattggcgaa
     1681 ccgcctgcca acaccgcaag aacgggttcg gatgctccag acctcgctgc aggcgaaagc
     1741 taagcggaac ttccccctgg ttttggcaca aggccttgat tttacacgat tctactccaa
     1801 aaatgtaggc ataacaagtg atattaatag attgataata gtgggttatc ttggtatgat
     1861 acgcgcatgt atgtcgctgt cgttc
//
LOCUS       DASRPQ010001463         2002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2356231, whole genome shotgun sequence.
ACCESSION   DASRPQ010001463 DASRPQ010000000
VERSION     DASRPQ010001463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2002
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2356231"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1313)
                     /locus_tag="VFD73_16700"
     CDS             complement(<1..1313)
                     /locus_tag="VFD73_16700"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HZI75623.1"
                     /translation="MNGPPARARWGGLVAILALCILSGGWLLRRKAAPDGTVYQQARL
                     FENVVASIHAHYIDSLDEGDLYQTAAKGLVSSLHDPYAELLTRESYRQYQRQMSGTEV
                     DVGDVSAMRSGSPHAFGPGDVILSIDGKSTLGWSARKVEEALAGGTGPFVTVVVRPLG
                     SSTPVIRRLTRTVVHVPATSDGILLGSGIGYIELRRISDGASAELRQAIDRLVADGMK
                     SLVLDLRGNPGGLINEGVRVASLFLHPGDTVAVSRGRSADHSKVYLAGSSGDWDNLRL
                     ALLVNHGTASSAELIAGALQDHDRALLVGTPTFGKGVLQTTYPLGDEIAIKLTTARWY
                     TPSGRTVQRPRPDAEGALGNRTPALTPQIFHSDAGRPIPDASGILPDLTVRGAPRTDA
                     ERALLASLGEDVGLFRNVLADYAAELQGSPAGPKFQEFHVTDEMR"
     gene            complement(1429..1884)
                     /locus_tag="VFD73_16705"
     CDS             complement(1429..1884)
                     /locus_tag="VFD73_16705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75624.1"
                     /translation="MRRIFTAILLLAGTAGCAAPRAAGAPLAPLGRSWAVPTLGLYQE
                     WWDKTVACSGKQGKMTDVNFYAVDAPGGAIELNGEMAHAWWVREGNRIYLPASALGEE
                     WLVRHEMLHALLQRGSHPTDVFVKGCHVASAAVWRDSTLTTDPGNPHGR"
BASE COUNT          375 a          643 c          638 g          346 t
ORIGIN      
        1 tcgcgcatct cgtcggtgac gtggaattcc tggaacttgg gacccgccgg gctcccctgc
       61 agttccgcgg cgtagtcggc cagcacgttg cggaacagac caacatcctc tcccaaggag
      121 gccagcagcg cacgctcggc gtcggtgcga ggcgcccccc ggaccgtcag gtccggcagt
      181 atcccgctcg catcaggaat cggacgcccg gcatccgaat ggaagatctg tggagtgagg
      241 gcaggggtgc ggttgccgag ggcaccctca gcgtcaggac ggggccgctg cacggtgcgc
      301 ccactcggag tgtaccagcg tgcggtagtc agcttgatgg cgatctcgtc acccagcgga
      361 tacgtggtct gaaggacgcc ttttccaaag gtgggtgttc ctaccaggag cgctcgatcg
      421 tggtcttgaa gtgctcccgc aatcaactct gccgagctcg cggttccgtg gttcaccagc
      481 aaggcgagtc gaagattatc ccagtcacct gacgacccgg cgaggtacac tttcgaatga
      541 tcagctgagc gtcccctgga caccgctacg gtgtctccag ggtgaaggaa aagactggcg
      601 acgcggactc cttcgttgat gagcccccct ggattgcccc gaaggtccag caccagcgac
      661 ttcattccgt ccgcaaccag acgatcgatg gcctgccgga gctcggcgct ggcaccgtcg
      721 ctgattcttc ggagctcgat gtagccgatc cccgagccca gcaagatccc gtcagacgta
      781 gctgggacgt gcaccaccgt ccgggtgagg cgccgaatca cgggagtgct ggagcccaaa
      841 gggcgtacca ccaccgtcac gaacgggccg gtgcctcccg ccagagcctc ttcaaccttc
      901 cgtgccgacc agcccagcgt gctcttgccg tcgatgctga ggatgacgtc gccggggccg
      961 aaggcgtggg gactcccgct gcgcattgcg gacacatcgc caacgtccac ctcggttccg
     1021 gacatctgcc gttgatattg gcggtagctc tcgcgggtga gcagttcggc gtaggggtcg
     1081 tgcagggagg aaaccagccc tttggcggct gtctggtaga gatcgccttc gtccagggag
     1141 tcgatatagt gggcgtgaat cgaggcgacg acgttctcaa acaaccgggc ctgctggtag
     1201 accgttccgt ccggcgccgc cttccggcgg aggagccagc ctccactgag gatgcagaga
     1261 gcaaggatcg ctaccagccc gccccagcgg gctctagcgg ggggtccatt catgcgagta
     1321 gctcgcgcga aatgccaaaa gatctgctgg atgcatctcc ctatcgactg aaatgcagca
     1381 gtggaatcca aggtttcatg gggagcaaga tgaaggccgc ggagcggctt atcgtccgtg
     1441 cgggttcccc gggtctgtgg tcaaggtcga gtcccgccat accgccgcgg aagccacgtg
     1501 acaccccttt acgaagacat cagtcgggtg gctgccgcgc tggagcagcg cgtggagcat
     1561 ctcgtgccgg accagccact cttcccctag agcactcgct ggaagataga tccgattgcc
     1621 ctcccgtacc caccaggcgt gagccatctc gccgttcagc tcgatcgcgc ctccgggagc
     1681 atcgacagca tagaagttca cgtccgtcat cttcccctgt tttccggagc acgcgacggt
     1741 cttatcccac cactcttgat acaggcccaa ggtgggaact gcccaggagc gaccgagggg
     1801 cgccagcggc gcgcccgcgg cccgcggggc agcgcatcca gcggtcccgg ccaacagaag
     1861 aattgcggtg aagatacgac gcatccgtga gctccaaatc aagaatccac atgacggcgg
     1921 cgggcgaggg gcgactccgc catcgagggt caggtcaggt gcgggacgca cccggccaaa
     1981 attgctgcac gattcggtcc ac
//
LOCUS       DASRPQ010001464         1010 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3637024, whole genome shotgun sequence.
ACCESSION   DASRPQ010001464 DASRPQ010000000
VERSION     DASRPQ010001464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3637024"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..591)
                     /locus_tag="VFD73_16710"
     CDS             complement(<1..591)
                     /locus_tag="VFD73_16710"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HZI75625.1"
                     /translation="MDQPPMDQAVAVDPNLVCPVTGSPLHREGNDLVSADGAHRYPCE
                     PGIFRLFVSEAAATGVDAATSKVQEFYEEAPFPNYNDVDDVAALVKRADTSVFGRLLR
                     EQIPVNASVLEVGCGTGQLSNYLAATCVAKIYAADMTLASLRLGRKFAAEQNIRGVRF
                     LQMNLFKPCIRPGSMDLVISNGVLHHTADSKAAFMSI"
     gene            complement(608..>1010)
                     /locus_tag="VFD73_16715"
     CDS             complement(608..>1010)
                     /locus_tag="VFD73_16715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75626.1"
                     /translation="LKTDRRSFLRNSPLGVAALLLALQANPVRLAAKPFRPVQPENAA
                     MVSVGRVYLDQTPHEANAATLRHLLDLAAEVSAATLPDPEKERLAMRQSEDFRTGQTV
                     LVQGWVLSRTEARLYALAALQAEARRAVGHA"
BASE COUNT          177 a          326 c          323 g          184 t
ORIGIN      
        1 tatgctcatg aaggccgcct tgctgtcggc ggtatggtgc agaacgccgt tgctgatcac
       61 cagatccatc gagcccggac ggatgcaggg cttgaacagg ttcatctgaa ggaagcggac
      121 gccccggata ttctgttcgg ccgcgaactt ccggccaagc ctgagcgagg ccagcgtcat
      181 gtcggcggcg tagatcttcg ccacgcaggt cgccgccaga tagttgctga gctgcccggt
      241 gccgcatccc acttccagca cgctggcatt gaccgggatc tgttcgcgca gcagccgtcc
      301 gaataccgac gtatcggcac gcttcaccag tgccgcgaca tcatcgacgt cgttgtagtt
      361 gggaaacggc gcctcttcgt agaattcctg gaccttgctg gtggcggcgt ccacgccagt
      421 ggccgcggct tccgaaacga acaggcggaa gatgccgggt tcgcacggat agcggtgggc
      481 accgtccgca ctgacaagat cgttcccctc ccggtgcagg gggctgcccg tgaccgggca
      541 gaccagattg gggtcaaccg caacggcctg atccatcggt ggctgatcca tggcgggctc
      601 ccgtcgatca ggcatgtccc accgccctcc tggcttcggc ctggagtgcg gcgagtgcgt
      661 atagcctcgc ctcggtgcgt gacagtaccc acccctggac cagaacggtc tgaccggtcc
      721 ggaaatcctc cgactgtcgc atcgccagcc tttccttctc cgggtcgggc agggtcgcgg
      781 cacttacttc agccgcaagg tcgagcaaat gccgaagcgt tgccgcattg gcttcatgcg
      841 gggtctgatc cagatagacc cgcccgaccg aaaccatggc ggcattctcc ggctgaacgg
      901 ggcggaacgg cttcgcggcc agtcggaccg gattggcctg caacgccagc agcagggccg
      961 cgacccccag tggggaattc cgcagaaagg atcgccggtc ggttttcagg
//
LOCUS       DASRPQ010001465         1091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4562892, whole genome shotgun sequence.
ACCESSION   DASRPQ010001465 DASRPQ010000000
VERSION     DASRPQ010001465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4562892"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            251..>1091
                     /locus_tag="VFD73_16720"
     CDS             251..>1091
                     /locus_tag="VFD73_16720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75627.1"
                     /translation="MKLSRALVLGIGTTTSAAVACGSSDLMQSSPGGIPPRVIAVAVT
                     PNPNNVLSALVSFRAEGADSARVMIVGENLPLDSTPYYPVKAGVDTIPVLGLRPSTRY
                     GQVVQLIGASRSGASDTVFYATHPLPALLEHLSVTTTGTGGPGFTLTSVQVVGNTVVA
                     VAFDSAGTIRWYREFPGAETVSGDLKQQPNGDFTLYHGLSFGSQHTEGEYIEVNPAGD
                     SVRAITLSPPRYLDNHELLLTTGADGQERQHFFFYDHRPIDLSFVGVPATIPLAGHHL
                     VRLR"
BASE COUNT          179 a          384 c          325 g          203 t
ORIGIN      
        1 aagcaaagcg gccggatccc acctggggtc cggccgttcg cctatcgaga cttcgttccc
       61 gccgcgagga ctcagggcga ggcctgctcg gccttgagcc atcgctcggt gagctggccc
      121 gggctctgtc caggtgagcg gtgagcgatt caccgctttc tgctcacctt ttactagcac
      181 gaattgccta ccgcggacgc gtgtgacgtc gagcacatcc cagcggcgtt ccgcgcgtat
      241 gctgtgaaga atgaagctga gcagagcact ggtgctcggg atcggcacca ccaccagcgc
      301 cgccgttgca tgcggcagca gcgacttgat gcagtcatca ccggggggca ttccgccccg
      361 cgtcatcgct gttgccgtca cccccaaccc caacaacgtg ctctccgccc tcgtcagctt
      421 tcgggccgag ggcgccgact cggctcgagt gatgattgtg ggggaaaatc ttccgctcga
      481 ctccaccccc tactatccgg tcaaagccgg agtcgacacg atcccggtac tggggcttcg
      541 gccctcgact cgctacggcc aggtggttca gctgatcggc gcatcgcgga gcggcgcgtc
      601 cgacaccgtc ttctacgcca ctcatccgct ccccgctctg ctcgagcacc tgagcgttac
      661 caccaccggc accggtggcc cgggcttcac gctcacctcg gttcaagtag tcgggaacac
      721 cgtggtcgcc gtggcgttcg actccgccgg aaccatccgt tggtatcgcg agtttcccgg
      781 ggccgagacg gtgagtggcg acctgaaaca gcagcccaat ggagacttca cactgtacca
      841 cggtctgtcg tttgggtcgc agcacaccga gggcgaatac atcgaggtca atccggccgg
      901 cgattcggtc cgcgcgatta cgctgtcgcc tccccgctac ctcgacaacc acgagctgct
      961 gctcaccacc ggagccgacg gccaggagcg gcagcacttc ttcttctacg atcaccgccc
     1021 catcgatctt agtttcgtgg gcgtgccggc gacgattccc ctggcgggac accacctggt
     1081 ccggctccgg g
//
LOCUS       DASRPQ010001466         1186 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1102106, whole genome shotgun sequence.
ACCESSION   DASRPQ010001466 DASRPQ010000000
VERSION     DASRPQ010001466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1102106"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(154..843)
                     /locus_tag="VFD73_16725"
     CDS             complement(154..843)
                     /locus_tag="VFD73_16725"
                     /inference="COORDINATES: protein motif:HMM:NF024752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZI75628.1"
                     /translation="MDPCPAAGAARPWRCPRPLPRGSGAAAGCLGRGARGRAAGAAFV
                     RGLASRCTRPWAGLPPFAHDGTERRTVRPQDPAEQTQCYSGKKKDHTVKNILFVNALL
                     IILFLSDTAGGRVHDKRLAEATPYPLPAGSRLLQDLGFLGFTLPEVEILMPTRKPPGA
                     DLSPAQQRANQALNARRLRIEHVNSSVKRCRVVKDRIRLWKQGVRDEVMEICCALHNL
                     RVRLTPWQPMV"
     gene            complement(819..1145)
                     /locus_tag="VFD73_16730"
                     /pseudo
     CDS             complement(819..1145)
                     /locus_tag="VFD73_16730"
                     /inference="COORDINATES: protein motif:HMM:NF025000.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
BASE COUNT          215 a          371 c          393 g          207 t
ORIGIN      
        1 tcaccgccgc tcatgaagcc gccctgcgtg gcgaagtggc cccgtccctc ctgcctgcct
       61 atgagatagc atcgcaagct gtggcgtgat gccggttttc actagctgaa cggatacctc
      121 tgagggtact gggtagagtt gagtttatcc cgattaaacc attggctgcc acggggtcag
      181 gcgcacccgg agattatgca gggcacagca gatttccatc acctcatcgc ggacaccctg
      241 cttccacaag cggatccggt ctttgacgac gcgacaacgc ttgacgctgc tgttgacatg
      301 ctcgatgcgc aggcggcggg cgttgagcgc ctggttcgcc cgttgctgcg ccggagacag
      361 gtccgcgccc ggaggtttcc tggtcggcat gaggatctcc acctcgggca gcgtgaagcc
      421 caggaagccg agatcctgca acaaccggct tccggccggt agaggatacg gggtggcttc
      481 ggccagccgc ttgtcatgga cgcgaccccc ggcggtgtcg ctgaggaaca gaatgatgag
      541 cagggcattg acgaacagga tgttctttac ggtatggtcc tttttcttgc cgctgtaaca
      601 ttgggtctgt tcagccgggt cctgggggcg gacggtgcgc cgttccgtcc cgtcatgcgc
      661 aaaaggggga aggcctgccc agggacgggt gcagcggctg gcaaggcccc ggacgaaggc
      721 tgctccagcg gcgcgacccc gagcgcccct tccgagacac ccagccgctg cgccagagcc
      781 gcgagggagc gggcgggggc atcgccaagg gcgcgcagcg ccggcagcag gacatggatc
      841 cactgattgg ctttgctctg gcccatgccg aacagccgtc cctggaccac ttgaaccgcg
      901 caggtcttca ggtacgtgag cacgaagaac agccgctctt gcggggttgc cagcgggcag
      961 gtccgataaa ccgtgaaccg gcgggcggtt cgcggtttgc catcgaggcg ccacgccgcc
     1021 ataggctcct ggaacgccgc ctcgaagggc gcgaccagga cctgaaattc ctccagggtc
     1081 aagctggtga gattgaggaa ctccgcaggg cggcactgca cgtcagcgaa ccggacacca
     1141 gccatggatc ctgcctcctg tcacggcacg ggtctatcac agacgc
//
LOCUS       DASRPQ010001467         1891 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_175124, whole genome shotgun sequence.
ACCESSION   DASRPQ010001467 DASRPQ010000000
VERSION     DASRPQ010001467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1891)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1891)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1891
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175124"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..712
                     /locus_tag="VFD73_16735"
     CDS             <1..712
                     /locus_tag="VFD73_16735"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HZI75629.1"
                     /translation="VYDEFVVSGRGLEEIVKMARAADGERIAVPRFGYRVTRLSHRVY
                     KLNVRMLRLLEDESIGRSAPRVSPAAVSQPSGNPRLEIGDQGRDVRRLQRALRRAGQD
                     VDIDGLFRQKTWGAVCSLQRSCGLTVDGIVGPGTWAELPSGVPMPILRSGSRGDAVVQ
                     LQRVLADQAQGRWESSPQAATGTFDASTSAAVKAFQQWNSIPSDGIVGDQTWAAAAGE
                     FSLEVAVGLTFLADDKPR"
     gene            complement(1556..>1891)
                     /locus_tag="VFD73_16740"
     CDS             complement(1556..>1891)
                     /locus_tag="VFD73_16740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75630.1"
                     /translation="RELILAYLGDGTRHYLATWNEGQPARFENTLSQTRFGGSRTIYA
                     PGRPDLIRDIDTVVANYFSLSYAAPRWFGNRRADFESDLRHLLHEYSPDGLFWDWPGD
                     TELVIATKS"
BASE COUNT          342 a          604 c          626 g          319 t
ORIGIN      
        1 ggtctacgac gagttcgtcg ttagcggccg gggacttgag gaaatcgtca agatggcgcg
       61 agcagcagac ggcgagcgca tcgcggtgcc ccggttcggg taccgggtga ccaggctgag
      121 ccaccgcgtt tacaaactga atgtccggat gctgcgcctc ctggaagatg aaagcattgg
      181 ccgatccgcg ccccgcgtgt cgccggctgc cgtcagccag ccctccggga accccaggct
      241 tgagatcggc gaccaaggca gagatgtacg tcgccttcag cgtgcacttc gccgggcggg
      301 ccaggatgtc gatatcgatg ggctgttccg ccagaagacg tggggggcag tctgctctct
      361 gcagcgctcc tgcggcctca ccgtcgacgg catcgtcgga cccggcacct gggctgaact
      421 cccctctggc gtgcctatgc caattctgcg ttctggatct cgcggtgacg ctgtcgtcca
      481 actccagcgc gtccttgctg accaggcgca aggtcgctgg gagtcctcac cccaagcagc
      541 cacgggcaca ttcgacgcca gcacgtccgc ggcggtcaag gcattccagc agtggaacag
      601 catccccagc gatggcatag tcggcgacca gacctgggcc gctgcagccg gggagttcag
      661 ccttgaggtc gctgtcggac tcacgttcct cgccgacgac aagccacgtt gacaccggcc
      721 gccaaggatc gcgaggggta aatggtggac atacaggccg ttcagccgcc tggcggcccc
      781 actcaccacg tccggggcct gctcggcgag aaagtaatct ggcgcgtcgg gcccggcccg
      841 gatgccctgc tcgccgcgca gccgcttttg ctcccgatgg atgccataac tgacgacagc
      901 cacgatcccg gccacggccc cgagcacgaa caccccggcc gcagccacca acacgatcgc
      961 cgccatgcac ctcacccctg gtggggccgg tgatccggtc ccagtctgtg gcaccgtccg
     1021 atgtcctggg caatgcgcgt catgaaggca gagcagcgga tacctggtgc agatacatgc
     1081 cgtgccgata agccagcatg gcggggccag gcgcgtccgc gtggcagccc atcacagtga
     1141 cgtgcagggg ctgcctgggc acggggcggg gcaggtggtc gaggtcaggc aaagcgtcag
     1201 ccaccagatc tggtgaatat gagcggacct caataaagtc cttgctggct ggccatttgt
     1261 atgagaatgc ccatccccgc gctcctgttt ggctggccgg ccgtcggcgg atctcaaccg
     1321 caggcggctg accgcctacc gggctgatat cgggacgtca ccgggagcac gaccccgtag
     1381 agaagcaaac gtagctgcgt cgattggacg taggagaaaa tcataagtcc tggaccagaa
     1441 gggtccggct acgcggcacg cctgggcgag gctgactcga cgttaccggc gtgatctacc
     1501 tgtggaggcc attcacgctg gcgtgagcgt ccgtaacgac atgccgcctg atccgttagc
     1561 tcttcgtcgc tatgacgagt tcggtgtcac ctggccagtc ccaaaacaga ccgtctggcg
     1621 aatactcgtg cagcaggtga cgtagatcgg actcgaagtc ggctcggcgg ttcccgaacc
     1681 atcggggcgc ggcgtacgac agcgagaagt agttggccac aacggtgtcg atgtctctga
     1741 tcaggtcggg gcgcccaggc gcgtagatgg tgcgcgagcc gccgaaccgg gtctgcgaca
     1801 gggtgttctc aaagcgtgcc ggctggccct cgttccaggt tgcgaggtaa tggcgcgtgc
     1861 cgtcaccgag gtaggcgagg atgagctccc g
//
LOCUS       DASRPQ010001468         1772 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1102284, whole genome shotgun sequence.
ACCESSION   DASRPQ010001468 DASRPQ010000000
VERSION     DASRPQ010001468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1772
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1102284"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            109..561
                     /locus_tag="VFD73_16745"
     CDS             109..561
                     /locus_tag="VFD73_16745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75631.1"
                     /translation="MAHISRHFQRLTSLSAGLLAACATGPDDSLLFSDAKRGPAVLVF
                     YGDTSAVELAPATRVGEVTTLRFTSFSGGCVRPDSTDVTVSGLNAEVHPHRRQLPPDA
                     VCTLDLRLDMNVAQLQFAEPGPARVRIVGLARPGDTPFVVERELLVSP"
     gene            666..989
                     /locus_tag="VFD73_16750"
     CDS             666..989
                     /locus_tag="VFD73_16750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75632.1"
                     /translation="MVHPVTAFVANRSGQPLSMLSVTDTLRRTGAVFQVVAPSSETLS
                     PDSTRVAPIFPDTLSQVLDEPFGDNVIVVVTADSRSTSAVYRLIHDVCSSVRRVAGPD
                     TLVLR"
     gene            1338..>1772
                     /locus_tag="VFD73_16755"
     CDS             1338..>1772
                     /locus_tag="VFD73_16755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75633.1"
                     /translation="MCFECANDPGDLADAVALYQDPFLDGFYLSGAEGFERWVKAERV
                     GLPERYHWALEQLTAGADAWGDPAAAAEWWRRNRAAGSPLAPGRPCVGRGLRFEEPLD
                     LRYQRRLRERFLQQRRRKLSVLLTKGGSKQESRACRSNELLGQ"
BASE COUNT          309 a          545 c          555 g          363 t
ORIGIN      
        1 agtcgagcct acagttcgca cgtggcagga tcctaccatt cgggacaccg taaacgtaaa
       61 atgaaagtct ccgcccggcc gcgtgtgcgg gcctgaaggg caattcctgt ggctcacatc
      121 tccagacact tccagcgact caccagcctg tcggcgggcc tccttgcggc ctgcgcgaca
      181 ggcccggacg actccttgct ctttagcgat gcaaagcggg gccctgcagt tctagtcttc
      241 tacggcgaca ccagcgcagt cgagctcgcc cccgcgaccc gtgtcggaga ggtgaccacc
      301 ctgcggttca ccagttttag cggcggctgc gtccggccgg atagcaccga tgtcacggtg
      361 agcggtctta atgccgaggt ccacccccac cgcaggcaac taccgcctga cgcggtgtgc
      421 acattggact tgcgcctgga catgaacgtg gcgcagctcc agtttgccga gcccggacca
      481 gcacgcgtgc gcattgtggg gctcgcccgt cccggagaca cacccttcgt agtagagcgg
      541 gagctgctgg tgtcgcccta ggtggacgcg agatggcgat agctctgcgt tatttcctac
      601 ttttgcccct cgtctctagt ctaccgcttg tgatcggttg cagtgaaccg gaggcttgcg
      661 acgcgatggt tcatcctgtc acggcgttcg ttgccaatcg tagtgggcaa ccactcagta
      721 tgctgagcgt gaccgacacg ctgcgccgta ccggggcggt gttccaggtc gttgccccca
      781 gtagcgagac gctctcgccc gatagcaccc gtgtggcccc gatctttccc gatacactct
      841 cccaggtact ggatgaacca ttcggcgaca acgtcattgt cgtggtgacg gctgatagca
      901 gatccaccag tgctgtttat cggttgattc acgatgtctg ttcgtcggtc cggagagttg
      961 ctggaccgga cacgctggtg ttgcggtgag ccgacactcc agtgctcgac agcgccgctg
     1021 tgcctctctg tttcattttg aacgctctcg ctccgagccc ctcgccagca ctccatcaaa
     1081 attggacgca agcgctgagc atcagcaggc tctcagttct catcgcagcc taaccttagc
     1141 gggatgtggc caatgacggc gacagccacg ctcgtcgagg cggcctgttg ttccggagga
     1201 tggagctgcg cggactgaga tttgcccaaa aaatcgtgcc gtttatctgg gtcgctcgct
     1261 tcaatgaatc ggcaaggatg atcgtgtagc cgtcagggtc cgcgctgggg cccctggtgc
     1321 tcacgtcgac ctgaatcttg tgcttcgaat gcgccaatga tcccggtgac ctggctgacg
     1381 ccgtagcgct ctaccaggat ccgttcctgg acggctttta cctcagcgga gcagaggggt
     1441 tcgagcggtg ggtgaaagcg gagcgcgtcg gactgcccga gcggtatcac tgggcactgg
     1501 aacagctcac ggcgggagcc gacgcgtggg gtgatcccgc tgcggccgca gaatggtggc
     1561 ggcgcaaccg tgcggcgggt agtccgttag cgcctgggcg accttgcgtc gggagaggtc
     1621 tgcgtttcga ggagcctctc gacctccgct atcagcgccg cctgagagaa cggtttctcc
     1681 agcagcgacg ccggaagttg agtgtactcc tcaccaaagg cggaagcaaa caggagtcgc
     1741 gtgcgtgccg aagcaatgag ttgctgggcc ag
//
LOCUS       DASRPQ010001469         1636 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1437306, whole genome shotgun sequence.
ACCESSION   DASRPQ010001469 DASRPQ010000000
VERSION     DASRPQ010001469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1437306"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..746
                     /locus_tag="VFD73_16760"
     CDS             <1..746
                     /locus_tag="VFD73_16760"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HZI75634.1"
                     /translation="IHLATLVHDDSVDHSVLRRGMPTINSLFSHQVSVIMGDYLYSRA
                     VIELVRLDDLEPLRVLSRITNEMTVGEMRQLLAHDPLNFSEEQYDLLIRAKTASLVSG
                     ACEIGALRATSSQREALRRYGEALGMAFQIVDDLLDYTEDATVTGKPFGSDLREHKVT
                     LPLIAALPRMRDQDRRRVSRLMHTAEPADAQIAEIIVAVGEAGGLDYARERALQLAQQ
                     ADTELDILPASAARDSLRASITYVIDRRR"
     gene            746..1018
                     /locus_tag="VFD73_16765"
     CDS             746..1018
                     /locus_tag="VFD73_16765"
                     /inference="COORDINATES: protein motif:HMM:NF025572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4321 domain-containing protein"
                     /protein_id="HZI75635.1"
                     /translation="MPSGPRRPRFYFGVLIVGFIVGGAMTSLLRQALPDSAARTFLTS
                     TWRPTFGPISADLLVVDFTLGPIGLHVSVLSLVGVLVAYLIARSLF"
     gene            1028..1279
                     /locus_tag="VFD73_16770"
     CDS             1028..1279
                     /locus_tag="VFD73_16770"
                     /inference="COORDINATES: protein motif:HMM:NF014470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HZI75636.1"
                     /translation="MGNLGVWEILMIMVVALLLFGAKRLPEVGSSIGKGIREFKRSIS
                     DTQDAIIGPDDQRSNLPPRTLDSNQQPSPTSGEPKRLSQ"
     gene            complement(1291..>1636)
                     /locus_tag="VFD73_16775"
     CDS             complement(1291..>1636)
                     /locus_tag="VFD73_16775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75637.1"
                     /translation="AAAMKLPNKEFGPFSRINPPLTNPIVVGTAFGLKKGERSGVLDT
                     KDGLYVLETLDHISADSTKFAKELDEYRARLINVAKQERVRNYLASLRKSAKVVDNRE
                     KVLRTTQPTPGA"
BASE COUNT          301 a          507 c          495 g          333 t
ORIGIN      
        1 tgattcatct ggcgacactg gtgcacgacg actccgtcga ccactcagtc ctgcgccggg
       61 gaatgcccac cattaactcg ctcttcagtc atcaggtctc cgtcatcatg ggcgactatc
      121 tgtactcccg ggcggtgatc gagctggttc ggctggacga tctggagccg ctccgggtgc
      181 tgagccgaat caccaacgag atgacggtgg gcgaaatgcg acagctgctc gcccatgacc
      241 cgctgaactt ctccgaagaa cagtacgacc tcctcatcag ggcaaaaaca gcatcactgg
      301 tttccggggc gtgtgagatt ggtgcgttgc gggcaaccag cagtcagcgg gaggcgctgc
      361 gacgctacgg cgaagcgctt ggaatggcct tccagatcgt ggacgatctg ctggactaca
      421 ccgaagacgc caccgtgacc ggaaagccgt tcggctccga cctcagggag cacaaggtga
      481 cgttgccgct cattgccgcg ctgccgcgca tgagagatca ggaccgtcgc agagtctccc
      541 gtctgatgca cacggcagaa ccagcggatg cgcagatcgc ggagatcatt gtggcggtcg
      601 gggaggcagg ggggttggat tacgccaggg agcgggcgct ccagctggcc cagcaggccg
      661 acacggaact cgacatcctg ccggcctccg ccgctcgaga ctcactgagg gcgagcatta
      721 cctacgtcat cgatcgcaga cgctgatgcc aagtggtccc cgccggcccc gcttctactt
      781 cggtgtcctg atcgtcggct tcatcgtcgg cggtgccatg acgtccctgc ttcggcaagc
      841 gttgccggat agcgccgctc gtaccttcct gaccagcacc tggcggccca ccttcgggcc
      901 tatctcagcc gatctcctgg tagtagactt caccttagga cccatcgggt tacacgtctc
      961 ggtactgagc ctggttggag tcctggtggc gtacttgatc gcaaggtcgc ttttctaggg
     1021 ggctcccgtg ggaaacctcg gagtgtggga aattctaatg attatggtag ttgccttgct
     1081 gctcttcgga gccaagcggc taccagaagt cggttcgtcg atcgggaaag gaattcggga
     1141 gttcaagcgg agcatctcgg acacccagga tgctatcatc ggtcccgacg atcagcggag
     1201 caaccttccg ccccggacgc tcgacagtaa tcagcagccc agcccaacgt ccggcgagcc
     1261 aaagcggctt tcccagtagg ccgctcggcg tcaggctccc ggagtgggct gggtggtccg
     1321 gaggactttc tcccggttgt cgacgacttt ggccgacttt cggagagacg cgaggtagtt
     1381 tctcacccgt tcctgcttgg ccacgttgat cagtcgcgcc cgatattcgt ccagctcctt
     1441 ggcaaacttg gtagaatcgg cgctgatgtg atccagcgtt tccaacacgt agagcccatc
     1501 cttcgtatcc agcacaccac ttcgctcgcc tttctttaac ccgaatgccg tacccacgac
     1561 aatggggttg gtcagcggcg ggttgatccg gctgaagggc ccgaactcct tgttcggcag
     1621 cttcatggca gccgcc
//
LOCUS       DASRPQ010001470         1513 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1102536, whole genome shotgun sequence.
ACCESSION   DASRPQ010001470 DASRPQ010000000
VERSION     DASRPQ010001470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1102536"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(103..1337)
                     /locus_tag="VFD73_16780"
     CDS             complement(join(103..1052,1052..1337))
                     /locus_tag="VFD73_16780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558251.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZI75638.1"
                     /translation="MAAQKKYPDELRERAVRMLFEVREREGKGHGELARVARQLGVHP
                     EALRSWAKQAEIDGGSRPGTTTDDKQRIAELEKENRELRRANEILKAASAYFREGTRP
                     EAAALVEFVDAHRDRFGVEPACAVLEFPVSSYYHAKKREAEPSAREIRDVVLKEKVMG
                     VWEGEKGRKVYGARKIWLELNSQGIAVARCTVGRLMRELEIRGASPGRKRPPATLPGD
                     PADRPSDLLERCFDAAAPNRRWVADITYVMTISGWVYTAFVMDLFARTILGWQVADHL
                     RSDLALDALEMAIWTRRDKDLGGLVHHSDRGVQYTSIRYAERLAGEKAVRSVGSKGDS
                     YDNAAAEALNSLYKRELIDPRKDWQGVDDVMLATMDWVQWYNEDRIHSYCGDMPPKKY
                     EEIYYRALESGKLTSSSQT"
BASE COUNT          262 a          559 c          398 g          294 t
ORIGIN      
        1 gatgcctccg gcaagaacca ggagctgcgg ggtcagcgct gtcagcctgc ggccttgctc
       61 aggttccagg tttgtggtac gccccggcaa gtctggaggc cgctatgtct gcgaactgct
      121 cgttagttta ccagattcca gtgcgcgata atagatttct tcgtactttt tcggcggcat
      181 gtcgccgcaa tacgagtgga tccggtcctc gttataccac tgcacccagt ccatcgtcgc
      241 gagcatcacg tcatcgactc cctgccagtc tttccgcggg tcgatgagct cacgcttgta
      301 aaggctgttc agcgcctccg ccgcagcatt atcatacgaa tcgcccttgc tccccaccga
      361 ccggactgcc ttctccccgg cgagccgctc ggcataacgg atagacgtat actggacgcc
      421 gcgatccgaa tgatggacca ggccgccaag atccttatcc cgccgcgtcc atatcgccat
      481 ctccagcgcg tcgagcgcaa gatcagaacg caggtgatca gcgacctgcc agccgagaat
      541 cgtccgcgcg aacaaatcca tcacgaaagc ggtgtagacc cagcccgaaa tcgtcatcac
      601 gtaggtgatg tccgctaccc agcggcggtt gggcgccgcc gcatcgaagc accgctccag
      661 caggtcagac ggccggtccg caggatcgcc gggcagcgtc gccggcggcc tcttccgccc
      721 cgggctggcc ccgcggatct ccagctcgcg catcagccgc ccgaccgtgc accgtgccac
      781 cgcaattccc tggctgttca gctccagcca gatcttccgc gcaccgtaca ccttccgtcc
      841 tttctctccc tcccacactc ccatgacctt ctccttcagg actacatcgc ggatttcccg
      901 cgccgacggc tccgcctcgc gcttcttggc gtggtaatac gatgacacgg ggaattcaag
      961 gaccgcgcag gccggctcga caccgaaccg gtcccggtgc gcatcaacga actcgactag
     1021 cgcggcagcc tcgggtcgag ttccctcgcg aaataggcac tggcggcctt caggatctca
     1081 ttagcccggc ggagctcccg gttttccttc tccagctccg cgatccgctg cttatcatcg
     1141 gtcgtggtcc cgggccgcga tccgccgtcg atttccgcct gctttgccca ggaccgcagc
     1201 gcctccggat gaacccccag ctgacgcgcg acccgggcca gttccccgtg ccccttgccc
     1261 tctcgttccc ggacctcgaa cagcatcctc accgcgcgtt cgcgcagctc atccgggtac
     1321 ttcttctgtg ccgccatgac cctgcatcct cccaggaatc agagcctcca agattcccgg
     1381 ggtggcccaa acctattact gcgcgccagt aaacctgctc gtccccgcac tccccgcctc
     1441 ctgatttgcc ctatagtatt cagcgcaatc ccgggctaca gccagactgg acgaatgaca
     1501 cgaccagcag ggc
//
LOCUS       DASRPQ010001471         1122 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2709104, whole genome shotgun sequence.
ACCESSION   DASRPQ010001471 DASRPQ010000000
VERSION     DASRPQ010001471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2709104"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..560
                     /locus_tag="VFD73_16785"
     CDS             <1..560
                     /locus_tag="VFD73_16785"
                     /inference="COORDINATES: protein motif:HMM:NF025069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YfiR family protein"
                     /protein_id="HZI75639.1"
                     /translation="LPKHGEGELRSRTAIRLAASLLLLTGVLSAWADSEPEDALKSVV
                     VLNFLRYSKWPDGNGPLRVGVVGRASLLPPFRELLEGKSVNGRMVHVLEVNGAADPRC
                     CHVLYIATENVARMRKLLAGTRGAHVLTIGESDRFLENGGAVNLMLVDGHIGFEVSLD
                     ALEEAGIQISSRLLHLGQVRGKSTG"
     gene            557..>1122
                     /locus_tag="VFD73_16790"
     CDS             557..>1122
                     /locus_tag="VFD73_16790"
                     /inference="COORDINATES: protein motif:HMM:NF028461.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE sensor domain-containing protein"
                     /protein_id="HZI75640.1"
                     /translation="MNRSLSLRAKLISVIVGVSLVAEALAAAGFSWLAVRRYWQFTDS
                     QVEAIGAIVADHAAPAIALRDRKAADELLSSLHAEPQIREAAVYSANGLCFASFSRSG
                     GGRCPPIGADGTRRESADLVFRRGILEDGERLGSLLLVAEMPSMSAVLLEYSKPAAWI
                     VLLSLLAASLVAMLLQAKVSAPLLGMAVV"
BASE COUNT          178 a          315 c          405 g          224 t
ORIGIN      
        1 atctgccaaa gcacggggag ggtgagttga ggagcaggac agcaatccgg ttggccgcca
       61 gcttactgct tctgaccggc gtcctgagtg cctgggcgga cagcgaaccc gaggatgccc
      121 tgaaatccgt ggtagtgctg aatttcctgc gctattccaa gtggccggac ggcaatggcc
      181 cgctccgggt cggtgtggtg ggacgcgctt cgttgctgcc cccgttccgt gaattgctgg
      241 aaggcaagtc ggtcaacggg cggatggttc acgtactcga agtcaacggc gctgccgatc
      301 cgcgatgctg ccatgtgctt tacatcgcga cggagaatgt cgcgcgaatg cgcaagttgc
      361 tggccggaac acggggagcc catgttctga ccattgggga atcggaccgg ttcctggaga
      421 acggaggagc cgtgaacctg atgctcgtgg atgggcatat cggtttcgaa gtgagcctcg
      481 atgcgctgga agaggcgggc atccagatca gctcgcgcct gttgcacctg ggacaggtga
      541 gggggaagag cacgggatga accgttctct ctcgctgcga gccaagctga tttcggtcat
      601 cgtgggcgtc agtctggtag cggaggcgct ggcggccgcg ggcttctcct ggctggccgt
      661 ccgccggtac tggcagttca ccgactccca ggtagaggcg atcggcgcga tcgtggccga
      721 ccatgcggcg ccggcgatcg cgctgcggga ccggaaagcg gccgatgaac ttctctcctc
      781 tttgcacgcg gaaccgcaga tccgggaagc cgcggtctat tccgccaatg gcttgtgttt
      841 cgcctcgttc agccgctccg ggggtgggcg gtgccctccg atcggagcgg acgggacacg
      901 gcgggagtcg gccgatctgg tgtttcgccg cggcattctg gaagatggcg agcgtctcgg
      961 aagcctcctg ctggttgcgg agatgccttc gatgagcgcg gtactgctgg agtattccaa
     1021 gcccgcggcc tggatcgttc tgttgagcct gctggcggcc agcctggtag cgatgctgtt
     1081 gcaggcgaag gtctcggcgc ccctgctggg gatggctgtg gt
//
LOCUS       DASRPQ010001472         1189 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4236107, whole genome shotgun sequence.
ACCESSION   DASRPQ010001472 DASRPQ010000000
VERSION     DASRPQ010001472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4236107"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..934
                     /locus_tag="VFD73_16795"
     CDS             <1..934
                     /locus_tag="VFD73_16795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75641.1"
                     /translation="SRWAAIKTPSPGCGWLSSVAALPGNKAWAVGYQTNSSGITHTLT
                     EYYNGSAWAIEPSPNPGPTAELYSVTVTPSGTVWAAGVYYNSNGDQESLLLKRTGSTW
                     TPVTAPGLASLQGITSTPSGQLWAVGWGFNGNYLNNSTVILMQTASGWKQVSSPSPGK
                     GNGSYLYSVAAGPNNALWAVGKYYDSNTFAPHTLTVRYQSGKWTQVTSPTPGSADDWL
                     YSVTITPSGNVWAVGGATGSQCESNLAEEYTGGAWKVVTVPNRGTCSSNNANALYGVT
                     ATSTGTLYTVGQSDISTLVEQNVSGTWKIVPSDN"
BASE COUNT          246 a          414 c          370 g          159 t
ORIGIN      
        1 atcgcggtgg gcggcgatca agacgccgag tcccggctgc ggctggctca gctcggtcgc
       61 ggccctgccc ggcaacaagg catgggcggt gggataccag accaactcca gcgggatcac
      121 ccacaccctc accgagtact acaacggctc agcgtgggcc atcgagccca gcccgaaccc
      181 ggggccgacg gccgaactct acagcgtcac cgtcacgccg tccggcacgg tctgggcagc
      241 gggggtctat tacaacagca acggcgacca ggaaagcctg ctgctcaagc gcaccggctc
      301 cacgtggacc ccagtcaccg cacccggcct ggcgtccctg caggggatca cctccacccc
      361 gagcggccaa ctgtgggccg tgggctgggg cttcaacggc aactacctca acaactccac
      421 cgtgatcttg atgcagaccg ccagcggctg gaagcaagtc tccagcccca gcccgggaaa
      481 gggaaacgga agctacctgt attcggtagc ggcgggaccg aacaacgcgt tgtgggcggt
      541 cggcaagtac tacgacagca acacgttcgc gccgcacacc ctgacggtgc gataccagtc
      601 cgggaaatgg acccaggtga ctagcccaac tcctggctcg gcagatgact ggctctattc
      661 ggtcaccatc acccccagcg gcaacgtgtg ggcagtcggc ggggccaccg gctcacagtg
      721 tgaaagcaac ctggccgagg aatacaccgg cggcgcctgg aaggtggtca cagtgcccaa
      781 ccgcgggacg tgcagcagca acaacgccaa cgcgctctac ggggtgaccg ccaccagcac
      841 cgggacgctg tacacggtcg ggcaaagcga catctccacg ctggtggagc agaacgtctc
      901 cggcacctgg aaaatcgtgc cctccgacaa ctgaacagat caatccgccc ccggcaagaa
      961 gcgccactgc ttggtatcgc attcagaccc gcttggaatg gctgcgactt gtacagatct
     1021 gcagccaccc tggtgaaatt cgggagcaca aggggcagcc ccacgctcca cctactcggt
     1081 ttctcaaccg gcgggtgagc ccgcaggccc ggtgggcccg gcgactaagc cgagcccacc
     1141 cggcgcgtgg ggcgcttgcc ggccggacag cacaggcagc ggttcagcc
//
LOCUS       DASRPQ010001473         1908 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_793330, whole genome shotgun sequence.
ACCESSION   DASRPQ010001473 DASRPQ010000000
VERSION     DASRPQ010001473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1908
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_793330"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..695)
                     /locus_tag="VFD73_16800"
     CDS             complement(<1..695)
                     /locus_tag="VFD73_16800"
                     /EC_number="4.2.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF025065.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase family protein"
                     /protein_id="HZI75642.1"
                     /translation="MTTGVDDASANSVLVVQASGSYPVYFAPGILSRLSELVARHLPS
                     RRVIMLADQEVLRLSQAGKLGGLKWAGETLTFPSGEESKTREWWGRLTDAMLERRYGR
                     DSGIIGLGGGVAGDLSGFVAATYMRGIPHLQVPTTLLAMLDASVGGKTGINTPVGKNL
                     VGAFHPPVAVVADALVLATLPDRAYRAGLAEAVKHGLIADADYFAWMEQQAGSLLARD
                     PAALAYLVRRSVE"
     gene            complement(700..1245)
                     /locus_tag="VFD73_16805"
     CDS             complement(700..1245)
                     /locus_tag="VFD73_16805"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HZI75643.1"
                     /translation="MKIYTRTGDHGDTGLFGGGRVPKDHPRVAAYGDVDELNSVLGVV
                     RATPPADWFDFLFESVQRDLFSIGGQLAAPDPAAVAKALAKADLSEARVGEFERIIDQ
                     ADQELPPLRAFVLPAGTPKAALLHLARTVCRRAERSVVALTREHEVPSLFIPYLNRLS
                     DLLFALARLANHHGGVRDAIW"
     gene            1394..>1908
                     /locus_tag="VFD73_16810"
     CDS             1394..>1908
                     /locus_tag="VFD73_16810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HZI75644.1"
                     /translation="MAEQELKDISIIGGGPTGLFAAFYAGMRGASARIIDALPALGGQ
                     LMALYPEKYIFDVAGFPKVLAKDLVRDMAAQALQFGATTHLGEVVSGLRRVQNGDAAH
                     FVLETSGGEYPSKTIIIAAGIGAFEARRLGIENEDLYEEKGLYFKVLDPKQFQGKRVL
                     LVGGGDSAFDWA"
BASE COUNT          397 a          587 c          601 g          323 t
ORIGIN      
        1 atttcgacgc tgcggcgcac caagtatgcc aaagccgcgg gatctcgagc gagcagggac
       61 cctgcctgct gctccatcca tgcgaagtaa tccgcgtcgg caattaaccc gtgctttacc
      121 gcttcggcca ggcctgcacg ataggctcga tcgggcagcg tggccaggac caatgcgtca
      181 gccaccacgg ccacgggtgg atgaaaggcg ccgaccaagt tttttcccac cggcgtgttg
      241 attccggtct ttcctccaac cgaggcatcc agcatggcca gcagcgtggt aggaacttgg
      301 agatgaggaa tgccccgcat gtaggtggcg gcgacgaagc cggaaagatc accggccact
      361 ccgccgccaa ggccgatgat tccggaatcc cgcccgtatc gacgttccaa catggcgtcg
      421 gtcaggcgac cccaccactc ccgcgttttg gattcctcgc cggaagggaa cgtcagcgtt
      481 tcgcccgccc atttcagccc gcccagcttt ccagcttggg agagtcgcag gacttcctgg
      541 tccgccaaca tgatcacacg ccgcgatggg agatggcgcg cgaccagctc gctgaggcgc
      601 gacagaatgc ccggtgcgaa gtacacgggg tagctccccg aggcctgcac cacgagcacc
      661 gaattcgccg aggcgtcatc tacaccggtg gtcatgagac taccagatag cgtctcgcac
      721 tccgccgtga tggttcgcca ggcgggcgag tgcaaacaag agatcggaca aacgattcaa
      781 ataggggatg aagagactgg gcacctcgtg ctcgcgcgtc agggccacga cgcttcgctc
      841 ggcgcgacga cagacggttc gagccaaatg cagaagtgcc gccttgggag tgccggccgg
      901 gagaacgaac gctcgaagcg gaggcagctc ctgatccgcc tgatcgatga tccgctcgaa
      961 ctcacccacc cgggcctccg agagatcggc cttggccagc gcctttgcca ccgccgcggg
     1021 atccggtgct gccaactggc cgcctatgga gaaaagatca cgctgcaccg actcaaacag
     1081 gaaatcgaac cagtcagccg ggggagttgc ccgtaccacg cccaggaccg agttgagctc
     1141 atccacatcg ccataggcgg caactctggg atggtctttc ggaacccgtc caccgccgaa
     1201 caggccggtg tcaccatggt caccggtgcg ggtgtagatc ttcatgcaaa cctttcaagg
     1261 cgtgttcaac cgggtcggcc gagtgaatgt gatcggcctg gcgggcgagc gaaagggtag
     1321 atcgaggaga cggaggtgcg agtggcgcga ttacattagg acaactccca gagtcaacgt
     1381 ccaaggagaa gcagtggccg agcaggagtt gaaagatatc tccattattg gcggcggccc
     1441 caccggtctg ttcgccgcat tttacgcggg gatgcgggga gcctcggccc ggatcatcga
     1501 cgcgctgccg gcgctcggtg gccagctgat ggccctctat ccggagaaat acatcttcga
     1561 cgtcgcggga ttccccaaag tattggccaa ggacctcgtg cgtgacatgg ctgcgcaagc
     1621 gttgcagttc ggcgccacca cgcacctcgg cgaagtggta agcgggctcc ggcgagtgca
     1681 gaacggcgat gccgcccatt tcgtactgga gacctcaggg ggcgagtatc cctccaagac
     1741 catcatcatc gcagccggca tcggagcatt tgaggcccgc aggctgggca tcgagaacga
     1801 ggacctgtat gaggaaaagg gactctactt caaggttctc gacccgaaac agttccaggg
     1861 caagcgagtg ttactggtag gcggcggcga ctcggcgttc gattgggc
//
LOCUS       DASRPQ010001474         1495 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2357133, whole genome shotgun sequence.
ACCESSION   DASRPQ010001474 DASRPQ010000000
VERSION     DASRPQ010001474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1495)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1495)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1495
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2357133"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..403)
                     /locus_tag="VFD73_16815"
     CDS             complement(<1..403)
                     /locus_tag="VFD73_16815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HZI75645.1"
                     /translation="MTDLAAGQRGSGAGTIAAETGAKLRATEPLNATLNWSQELLDAE
                     AARVDAMITPGPLAGMPLALKDNIVTIEQPTTCGSRILEGYRSPFNATVVNRLRDAGA
                     MIAVKANMDEFAMGSSTEHSAFGRVKHPLDPA"
     gene            complement(400..699)
                     /gene="gatC"
                     /locus_tag="VFD73_16820"
     CDS             complement(400..699)
                     /gene="gatC"
                     /locus_tag="VFD73_16820"
                     /inference="COORDINATES: protein motif:HMM:TIGR00135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HZI75646.1"
                     /translation="MTIGREEVLHVAKLAELAVADRELNRLVEQLNRIVDYVAQLDQV
                     PADQIAEAFLPGPPSVDLREDVEGAMHLSRPPSALAPEFKEGFFLVPRHGAMEDS"
     gene            complement(696..>1495)
                     /locus_tag="VFD73_16825"
     CDS             complement(696..>1495)
                     /locus_tag="VFD73_16825"
                     /inference="COORDINATES: protein motif:HMM:NF024754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HZI75647.1"
                     /translation="PEGADRWENVRELVASAANWSEEVPTDADDSGTPLERFLAEAAL
                     LSSVDTAEGEEQGVTLMTLHTAKGLEWPVVVLTGLEHGLFPLARAEEQPSGLEEERRL
                     CYVGLTRAKDKLYLTWARARRRGGELRPGIASRFLRAIPPGIVEERRTTSLWAPDWSA
                     GARGGRAGGQSDRRSADPSWTNYGSSFNPSVRSSASLPAEEASQDSPRYVKGERVRHR
                     RFGSGTIQGLTGTGRDLKVSVAFDDAEVGVKQLLVAYAGLEREWESA"
BASE COUNT          260 a          513 c          451 g          271 t
ORIGIN      
        1 gagccgggtc caacgggtgc ttgacccgac cgaatgcgga gtgctcggtc gaggatccca
       61 tggcaaactc atccatgttc gccttgacgg cgatcattgc gcccgcatcg cgcaaccgat
      121 tcaccaccgt ggcattgaac ggtgagcgat atccctcgag gatgcgagaa ccgcacgtgg
      181 tcggctgctc gatggtgacg atattgtcct tgagcgcgag cggcatgccg gcaagaggcc
      241 caggagtgat catggcatcg acccgcgccg cctccgcgtc gagcagctcc tgcgaccagt
      301 tcaacgtggc gttgagtggc tccgtggcac gcaacttcgc tccagtttcc gctgcaatgg
      361 ttcctgcccc gctgccccgc tgccccgcag ccaagtcggt cacgagtcct ccatggcacc
      421 gtggcgtggc accaggaaga agccttcttt gaactccggc gccagcgcac tgggcggtcg
      481 ggaaagatgc atggcgcctt cgacatcttc ccggagatct acgctgggcg gacctggcag
      541 gaacgcctct gcaatttgat ccgccggaac ctggtcgagc tgtgcgacgt agtcgacgat
      601 ccggttcaat tgttctacca gacggttcag ctcccggtct gcgacggcca gctccgccag
      661 cttcgcgacg tgcagcacct cttcccgacc aatcgtcatg cgctctccca ttcgcgttcc
      721 agcccggcgt acgcaaccag cagctgcttt actcccactt cggcatcgtc gaaggccacg
      781 gagactttga ggtcgcggcc ggtgccggtc aatccttgta tcgtgccgct gccaaaccga
      841 cggtgacgca cgcgctcgcc cttgacatag cgcggactgt cttgggatgc ctcttcagcg
      901 ggcagactgg cggaggagcg gacggacgga ttgaaactcg atccatagtt ggtccaactc
      961 gggtctgccg accgcctgtc cgactgtccg cctgcacgac caccccgggc tcccgctgac
     1021 cagtccggcg cccaaaggga cgtcgtccgg cgctcctcga cgattcccgg cggaatggcc
     1081 cgcaagaacc gggacgcaat gcccggccgg agctccccgc cgcgccgccg cgctcgagcc
     1141 caggtgagat acagcttgtc tttggctcga gtcaggccga catagcaaag tcgacgctcc
     1201 tcctccaaac ccgaaggctg ctcctcagcc cgggcgagcg ggaagagacc atgctccaaa
     1261 ccggtgagca ccacaaccgg ccattcgagc cctttggcgg tgtgaagggt catcagggtg
     1321 acgccttgct cttctccctc ggcggtgtcg accgagctca gcagagcagc ctcggcgaga
     1381 aaacgctcca gcggtgtgcc ggaatcgtcc gcgtcagtgg gcacttcctc cgaccagttg
     1441 gctgcgctgg cgacgagctc tcgaacattc tcccatcgat cggcaccttc ggggc
//
LOCUS       DASRPQ010001475         1411 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2709608, whole genome shotgun sequence.
ACCESSION   DASRPQ010001475 DASRPQ010000000
VERSION     DASRPQ010001475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1411
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2709608"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..434)
                     /locus_tag="VFD73_16830"
     CDS             complement(<1..434)
                     /locus_tag="VFD73_16830"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HZI75648.1"
                     /translation="MTVLEKLQTRSEASTATLPHSVVDDLAYLRTGIVNLYLYGRPGA
                     PNGSWVLIDTGLPGSAGRIMHAAEEWIGPWARPAAIILTHGHFDHVGALKELLRHWNV
                     PVYAHRLELPFLTGRSSYPPPDPSVGGGAMAALSRLYPRGPI"
     gene            complement(455..673)
                     /locus_tag="VFD73_16835"
     CDS             complement(455..673)
                     /locus_tag="VFD73_16835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75649.1"
                     /translation="MTPYDDPLPESGMGGASDSGAHGRHPASAAKLDHRSPLPDDVPG
                     DAAIERRHHHDPNYNGPERRLGPGAPES"
     gene            complement(746..1093)
                     /locus_tag="VFD73_16840"
     CDS             complement(746..1093)
                     /locus_tag="VFD73_16840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75650.1"
                     /translation="MGRFIRSIWVVAVVPLAACAGKSGPAGTTPDNPAVLEVENRGFA
                     DMVIYAISGSQRLRLGLATGNSTKSFTIPNSILRGAGTLRFLADPVGGSRTPVSDELS
                     VEPGEVVTLTIPP"
     gene            1092..>1411
                     /locus_tag="VFD73_16845"
     CDS             1092..>1411
                     /locus_tag="VFD73_16845"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI75651.1"
                     /translation="MNSTSGFKDPDLMIAPYRQEFRSAFERLNREWIETWFELEDEDR
                     EVFRNPEAKILAAGGQIFFVVRQGEVLGTCAVIPHGPGEWEIAKMAVASAARGQGLGD
                     LLMDV"
BASE COUNT          256 a          432 c          465 g          258 t
ORIGIN      
        1 tcgataggcc cgcgggggta cagacgcgac agcgccgcca tcgctcctcc acccacgctc
       61 ggatcgggcg gcggatacga cgagcgcccg gtgagaaacg gcagttccag ccgatgagca
      121 tagaccggca cgttccaatg ccggagcagc tctttcagcg ccccgacgtg atcgaagtgt
      181 ccgtgcgtca ggatgatcgc cgcggggcgg gcccatgggc caatccactc ttcggcggcg
      241 tgcatgattc ggccggctga tcccggcagg ccggtgtcga tcaacaccca cgacccgttt
      301 ggggcaccgg gccggccgta gagatataga ttgacgatcc cggttctgag gtacgccaga
      361 tcatccacca cgctgtgggg cagagtggcg gtgctcgctt cagagcgggt ttgcagcttc
      421 tccaggactg tcatgatctc gcctccccga agagtcagct ctccggtgct cctggcccca
      481 gtcggcgttc cggcccgtta tagttgggat cgtgatgatg tcttcgctcg atggccgcat
      541 cgccgggaac gtcatcgggg agcggagagc gatgatccag cttggcggca gaggcgggat
      601 gtcttccgtg cgctcccgag tcggacgcgc ctcccatccc agactccggc aatggatcgt
      661 cgtatggggt catagaacct cctccgagtt gctggcaacc tagaaccgtg cgccgccaag
      721 aggtgtggtg ccgctcacac cgggatcaag gtggaattgt gagggtgacg acctctcctg
      781 gctcgaccga caattcgtca ctcactggag ttcgagatcc gccgaccggg tcggccagga
      841 atcggagcgt ccctgcccct cgcaaaatgg agttggggat ggtgaacgac ttggtggagt
      901 tgcccgttgc caggccgagc cggagccgct gcgagccgct gatggcatag atcaccatgt
      961 cggcaaaccc ccggttctcc acctccagca cagcagggtt gtcgggggtt gtccctgccg
     1021 ggcccgactt cccagcgcag gcggcaagag gcaccacagc aaccacccag atcgaccgga
     1081 tgaacctgcc catgaattca acctccggct tcaaagatcc cgatctgatg atagccccgt
     1141 atcgccagga attcaggtct gctttcgaac ggctgaaccg cgagtggatt gagacctggt
     1201 tcgagctcga agatgaggac cgagaggtgt tccggaatcc ggaggcaaag attctggctg
     1261 ccggcggtca gatcttcttc gtcgtgcggc agggggaagt gctggggacc tgcgccgtca
     1321 ttccccatgg tcccggggag tgggagatcg ccaagatggc ggtagcatca gcggcgcggg
     1381 gccaggggct tggcgatctg ctcatggacg t
//
LOCUS       DASRPQ010001476         1058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2357179, whole genome shotgun sequence.
ACCESSION   DASRPQ010001476 DASRPQ010000000
VERSION     DASRPQ010001476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2357179"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1058
                     /locus_tag="VFD73_16850"
     CDS             <1..>1058
                     /locus_tag="VFD73_16850"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HZI75652.1"
                     /translation="YTFSIFAVVAIALIASWGVAALFAPLLGVWILKKPKAVHREEPG
                     PIMRVFRRFLALAMRARWVTVVLTLAVFGAALHGMRFVPQQFFPASDRAELLVDLQLP
                     ENASIYATQEVAARVDKLLKNDQDVDHWSTYVGQGAVRFYLPLNVQLPNDFFAQAVVV
                     TKGLQQRERIKARLEQALAIEFPSVVGRVYPLELGPPVGWPLQYRVSGLDPAEVRAIA
                     FQVAQEIGSTPGAENVNYNWMEPARTIRIRVDQDQARLLGLSSQQLALSLNAVVSGVT
                     ATQMRSGIYLVDVLVRASAEQRMSLATIRTLQVPLPDGRTVPLSQIAAVDYAQEYPIV
                     WRRNRQPTVTVQADLVPG"
BASE COUNT          180 a          343 c          340 g          195 t
ORIGIN      
        1 agtacacgtt ctcgattttt gccgtcgtcg ccatcgcact gatagcgtcc tggggggtgg
       61 ccgccctgtt tgcaccgttg cttggtgtct ggattctcaa gaagccgaag gcggtgcaca
      121 gggaggagcc cggtccgatc atgcgcgtct tccgccgctt cctggcgctg gcgatgcggg
      181 cgcgctgggt cacggtcgtc ctcacgctag ccgtgttcgg agcagcgctc cacggcatgc
      241 gcttcgtgcc acagcagttc tttccggcat ccgaccgagc cgagttattg gtggacctgc
      301 agctgcccga gaacgcttca atctacgcaa cccaagaagt cgcagcccgg gtggataagc
      361 tcctgaaaaa cgatcaggac gtggaccact ggagcaccta tgtcgggcaa ggtgcagtgc
      421 gcttctacct gcccctgaac gttcagcttc ccaatgactt tttcgcccag gccgtggtcg
      481 tcaccaaggg actgcagcag cgggagcgca tcaaagcgag gctcgaacaa gcgttggcga
      541 tcgagttccc gagcgttgtc gggcgggtct acccgctgga actcggccct ccggtcggat
      601 ggccactcca atatcgtgtc agtgggctgg acccggccga ggtgcgcgcg attgcgttcc
      661 aggtcgctca ggagataggg tccaccccgg gtgcggagaa cgtcaactac aactggatgg
      721 agccggcgcg cactatcagg atcagagtcg accaagacca ggctcggctc ctgggcctga
      781 gctcgcagca gctggcgctc tccctgaacg cggtcgtatc cggcgtcacg gccacccaga
      841 tgcgcagcgg gatctatctt gtcgacgtgc tggtccgggc ctccgccgag cagcgcatgt
      901 cgctggcaac gatccggacg ctccaggtgc cgctgccgga cgggcggacc gttcccctga
      961 gccagatcgc cgccgtcgat tacgcccagg aatatcccat cgtctggcgc cggaaccggc
     1021 agccgacggt aacggtgcag gccgacctcg tgcccggc
//
LOCUS       DASRPQ010001477         1286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_479150, whole genome shotgun sequence.
ACCESSION   DASRPQ010001477 DASRPQ010000000
VERSION     DASRPQ010001477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_479150"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..565)
                     /locus_tag="VFD73_16855"
     CDS             complement(110..565)
                     /locus_tag="VFD73_16855"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZI75653.1"
                     /translation="MAGAPGRGTREKDKPPILGLIQRGGQVALSMLANVQQTTIPPII
                     AATVAKGALIHTDEYGIYARLPAWGYQHKTVCHGRGEYARDEDRDGFCEVHVNTIEGF
                     WSLLRSWLRPHRGISQDKLPLYLGFFQFVHNARRRGKALLGALVAALVA"
     gene            complement(505..1053)
                     /locus_tag="VFD73_16860"
     CDS             complement(505..1053)
                     /locus_tag="VFD73_16860"
                     /inference="COORDINATES: protein motif:HMM:NF024170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZI75654.1"
                     /translation="MPAIDLVNLSGLLDDAKCFALVRQHRWPEGVRCSGCGSDAVIRN
                     GCDDTQPHRQRYRCKRCAGRFDDLTGTVLARHHQPLRVWVLCLYLMGLNLSNRQIALE
                     VGLSPSDVQAMTEHLRRGLVAKVPAARLEGEVEIDEVYVVAGHKGQPAAVAKRGGSGA
                     VAGWLARRAGARGRRTSRPSSA"
     gene            complement(1170..1286)
                     /locus_tag="VFD73_16865"
                     /pseudo
     CDS             complement(1170..1286)
                     /locus_tag="VFD73_16865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012673146.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
BASE COUNT          212 a          441 c          413 g          220 t
ORIGIN      
        1 gatcgccaac aagattgtcc acctgctcga aggtcgccca gatccactga ggcgatgacc
       61 gggatttttg cgagaggctc ttgttggttt tcggggtgtt gggtctgcct catgcgacca
      121 aggcggcgac gagcgcgcca agcagggctt tgccgcgacg gcgtgcgttg tgcacgaact
      181 gaaagaaccc gagatagagc ggcagcttgt cctgcgagat cccccggtgc gggcggagcc
      241 aggagcgcag cagggaccag aacccctcga tcgtgttgac gtgcacctcg caaaagccat
      301 ccctgtcctc gtcacgggcg tattcgccgc gcccgtggca gaccgtcttg tgctgatagc
      361 cccaggcggg caggcgggcg tagatgccat actcgtcggt atggatgagc gcgcccttgg
      421 ctaccgtggc tgcgatgatc ggcgggatcg tggtctgctg cacgttggcc agcatggaga
      481 gcgctacctg acctccgcgc tggatcaggc cgaggatggg cggcttgtcc ttctcccgcg
      541 tgccccggcc cggcgcgcca gccagcctgc gacggcgccc gaaccgcccc ttttggctac
      601 agccgcaggc tggcccttgt ggccggccac cacgtaaacc tcatcgatct ccacctcgcc
      661 ctccagccgg gctgctggga ctttggccac gaggccacgg cgcagatgtt ccgtcatcgc
      721 ctgcacgtcg gacgggctca gccccacctc caaggcgatc tgccggttcg agaggttcag
      781 gcccataagg tagaggcaca acacccacac ccgcagcggc tgatggtgtc gggccagcac
      841 ggtcccggtg aggtcgtcaa agcgcccggc gcagcgcttg caccgatagc gctgccgatg
      901 cggttgggtg tcgtcgcacc cattgcggat caccgcatcg ctgccgcagc cggagcagcg
      961 cacgccctcg ggccagcggt gctggcgcac cagcgcgaaa cacttggcgt cgtccagcag
     1021 ccccgagaga ttgaccaggt cgatggctgg catgatggcg atggctcctc gcaggagccg
     1081 gtcagctact cctactctcg ccttgaggcc agaccgcccg cagccccaca acacggcccc
     1141 cacctcacca ccccggaagc cgataagagc cgtgggcttt tggtcttggt gcgggagtga
     1201 tccacatcct ccaccgccag atagagctcg tactcgtgcc gctcagggtt gccgcagtac
     1261 tccgtgcccc ggtccgtcag tacgcg
//
LOCUS       DASRPQ010001478         1090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4236983, whole genome shotgun sequence.
ACCESSION   DASRPQ010001478 DASRPQ010000000
VERSION     DASRPQ010001478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4236983"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(458..865)
                     /locus_tag="VFD73_16870"
     CDS             complement(458..865)
                     /locus_tag="VFD73_16870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75655.1"
                     /translation="MSDNEIQFSRRHPPCRVELRTGSAPSMSQTPPPEQPTAVQTAQI
                     ERTHDEAGQAQSDQRLPLRPETAPKLAPRALRDSLTTAQAHARSAARLSGERLSSLLY
                     GPGAVEAHRAPYNQRYAPNYHEATREDPAKPGR"
     gene            complement(984..1057)
                     /locus_tag="VFD73_16875"
     tRNA            complement(984..1057)
                     /locus_tag="VFD73_16875"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1021..1023),aa:Val,seq:gac)
BASE COUNT          187 a          262 c          442 g          199 t
ORIGIN      
        1 tgttgccgtt tttggcaaag ggtttgccat ttggggatga agatgatgat cagcatggat
       61 gagacgagaa cgagcacgga gcgaacggag gggatggaga ttcacagagg aagaggagag
      121 aggcacatag ggcgatagac ggccaaggac gagagggccg cgctgcgagg gatggggtgg
      181 tgggatgagg atgaggcgca taggggattc cctttcgatg agaagggtgt gccggcccta
      241 tctcgccacg atgcgaggct cggcccggat atcccgatgc gtaagagtgg aaagcgctaa
      301 gggggaaggg gcgggatggc gggggtggtt atagtataga atacaatttc ttgcacgtca
      361 aggcggtgag gagtcctcac cccccagccc cctctccccg cggggagagg gggagcaggt
      421 cgtaccgggt gggtgatgtt ttcgtgagga atcggggcta gcggccgggt ttggcggggt
      481 cttcgcgggt ggcctcgtgg tagttggggg cgtagcgctg gttgtagggg gcgcgatggg
      541 cctcgacggc gcccggaccg tagagcaggc tggagaggcg ctcgccgctc aggcgggcgg
      601 cactgcgggc gtgggcctgg gcggtggtga ggctgtcgcg cagggcgcgg ggagcgagct
      661 tgggtgcggt ctcaggacgc agcggaagcc gctgatcgct ttgcgcctgg cccgcctcat
      721 cgtgggtccg ttcgatctgc gcggtctgga cggcggtggg ctgttcgggc ggtggtgtct
      781 ggctcataga aggtgcgctc ccggttctca actcgacccg gcatggcgga tgacgccggg
      841 agaactgtat ctcgttatct gacattgtag catacggctg aggtggtgag gcggcggtca
      901 tgccggttgc cattgcgaga tggcgcgctg aggcggcatg aaaaagccgc cggagggtgt
      961 gtctccagcg gccgttaccg gggtgggcga tgaggagctc gaatccccga cctccacgat
     1021 gtcaacgtgg cgctctaacc aactgagcta atcgcccgtg cgcatccagt gtagcatcgg
     1081 cggcggcggc
//
LOCUS       DASRPQ010001479         1421 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3639838, whole genome shotgun sequence.
ACCESSION   DASRPQ010001479 DASRPQ010000000
VERSION     DASRPQ010001479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1421
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3639838"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(85..921)
                     /locus_tag="VFD73_16880"
     CDS             complement(85..921)
                     /locus_tag="VFD73_16880"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI75656.1"
                     /translation="MLLIGAILAPGTRTVASLLRICGLMRERHFVNYHRVLNRAAWSP
                     LLASRLLLRLLIETFAPNGPVVLGLDDTIERRRGKRIAAKGIYRDPVRSSHGHFVKAS
                     GLRWLSVMLLVPIPWAERIWALPFLTALAPSERHNLEHGRRRKKLTEWGRQVVLQARR
                     WLPERDLVLVADSSFAALDFLAALVGHGVVCITRLRLDAAFYDPARPVCPEQSRTSSD
                     HGRAAAELVPGAHRCGHDLAARLGAGLVWRGRARCLPLLRHRGLAPCWTAHRADPLGV
                     AA"
BASE COUNT          292 a          445 c          468 g          216 t
ORIGIN      
        1 tgaacaaacc agcgcaggac ctggtgcggg tcctggttgg gatcggtgca gagcaaggct
       61 tgcgggtcga accggccaag cgggtcacgc agcaacaccc agcggatcgg cacgatgggc
      121 agtccagcat ggcgccagac cgcggtgccg gagcagaggt aaacagcgcg ctcgcccccg
      181 ccataccagc ccggcaccaa gacgtgctgc cagatcgtgc ccgcatcgat gagcacctgg
      241 gacaagttcg gcagccgctc gcccgtggtc cgaggacgtc cgagactgtt ccgggcagac
      301 ggggcgtgcc ggatcataga aggcggcatc aaggcgcagg cgggtgatgc agacgacacc
      361 gtggccgaca agagcggcca ggaaatccag ggcggcgaag ctgctgtcgg caaccagcac
      421 caggtcgcgt tccggcagcc atctgcgtgc ttgcaggacc acctgcctgc cccactcggt
      481 cagctttttg cgccgcctgc cgtgctcgag attgtgtcgt tcggaggggg ccagcgcggt
      541 cagaaacgga agagcccaga tgcgctccgc ccaggggatc ggcaccagca gcatcacgct
      601 aagccagcgc aggccggatg ccttgacgaa atgcccgtgg ctggagcgga ccgggtcgcg
      661 atagatgcct ttggcggcga tgcgcttgcc acggcgacgc tcgatcgtgt cgtcgaggcc
      721 gagcaccacg ggaccgttcg gcgcgaaagt ctcgatcagc agccgtaata gcagccggga
      781 ggccagaagc gggctccagg ccgctcggtt cagtacccgg tggtagttca cgaagtgccg
      841 ctcacgcatc agcccgcaga tccgcagcag gctggccact gtgcgtgtcc ccggagcgag
      901 aatggcgcca atcagcagca cctcggcatg gcgccagctc cgatgctaaa acagcggtgc
      961 aaaatgcagg atgaccgtgg cgaagcggga tggcaggacc ggcatggcgg cgtctcttgg
     1021 cggggacacg ccagccataa cagccagatc gctccgccac tcaacccgcc gcaaatggcc
     1081 aaagtcgagc ttagagctcc ctgataaacg ccggttcgaa gccataccgg gcatagggcg
     1141 gacatcctcc tgtcgttgac cgggcagtac tgccccgagc ttcctcgttt ggaacttaca
     1201 cagcggcggt ctccgcggca cttcgtccag ccgccaatac acatcgtatt tagtagtttt
     1261 agcagggtta gcagagctgg gcgtgttgag cgtaaatttc aaagtaccgg gtcgggaccg
     1321 agatccgcgt tacgggaagc attgccccga tccgcagggg gctgcttacg ccgacgacac
     1381 aaacgacacc tgttcgatac tggagatacc gagcaagccg a
//
LOCUS       DASRPQ010001480         1043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2710927, whole genome shotgun sequence.
ACCESSION   DASRPQ010001480 DASRPQ010000000
VERSION     DASRPQ010001480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2710927"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..555
                     /locus_tag="VFD73_16885"
     CDS             <1..555
                     /locus_tag="VFD73_16885"
                     /inference="COORDINATES: protein motif:HMM:NF020442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FRG domain-containing protein"
                     /protein_id="HZI75657.1"
                     /translation="DHPAANDWEILVTAQHHGLPTRLLDWTYSPLVAAHFATLDAERG
                     CDRVVWRLDWKKLHRFFKLPELALLIQDLEEILGSDGPLTPWALFSAPPDSKQFACML
                     EPPSLNARIVAQSATFTLCSVKDQSFDRFLESHGLGSTLTRFIIPAKETARFRDQLDL
                     ADVDERRLFPDLDGVAAEMRRYYS"
     gene            complement(546..938)
                     /locus_tag="VFD73_16890"
     CDS             complement(546..938)
                     /locus_tag="VFD73_16890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75658.1"
                     /translation="MKVLRLAPAFAAAFVLFLPNLSSAQAQAVAPRLPGCSWNCYSVV
                     LPYGQYVHEVRDGGSYVILEDGSVWEIRLPQRPFASSWRPGDFVVLKTVAAPVQNFEI
                     LLTHAENDKAEARLVGRGQPPAPNLPQE"
BASE COUNT          204 a          314 c          329 g          196 t
ORIGIN      
        1 gaccatccgg cggccaacga ctgggaaatc ctggtgacgg cccagcatca cgggctcccc
       61 acccgattgc tcgattggac ctactcaccg ctcgtagccg ctcactttgc gacgctggat
      121 gccgagcgtg gctgcgaccg ggtcgtgtgg cggctcgact ggaagaagct ccatcgcttc
      181 ttcaagctgc cggagctggc gctgctgatt caggatctgg aggagatact ggggagcgat
      241 ggcccgctga ccccgtgggc actgttttcc gcgcccccgg attcgaaaca gttcgcctgt
      301 atgctggagc cgccatcctt gaacgcgcgg atcgttgccc agtcggccac cttcaccctg
      361 tgctccgtca aggatcagtc attcgaccgg ttcctcgagt cgcatggcct gggttcgacc
      421 ctgacgaggt tcattattcc ggcaaaagaa accgcccgtt tccgcgacca gctggatttg
      481 gccgacgtgg acgagcggag attgtttccg gatttggacg gcgtggcagc cgagatgcgg
      541 cgctattact cctgaggcag gttgggtgcc ggcggctgac cgcgacccac cagacgagct
      601 tccgccttgt cgttttcggc gtgagtcagc agtatctcga agttctgcac tggcgccgca
      661 acggtcttga gcacgacgaa atcgccgggc cgccaactgg aggcgaaggg gcgctgaggc
      721 aggcggatct cccacacact tccgtcttcc aagatcacgt aactcccgcc atcacggact
      781 tcgtggacat actgcccgta cggcaacacc acgctgtagc agttccaact gcatcccggc
      841 agccggggtg ctacggcctg tgcctgggcg gacgacaggt ttggcaagaa cagaacgaat
      901 gcagcagcaa aggcgggggc caggcgaagg accttcacgg gactaccctc caaaaggtaa
      961 gtagaagaag cttactacca attttggagt tccgcagtga ggcgcggaac gcgggaaagg
     1021 tgaggaaagg gtgaggaccg ttg
//
LOCUS       DASRPQ010001481         3436 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4564642, whole genome shotgun sequence.
ACCESSION   DASRPQ010001481 DASRPQ010000000
VERSION     DASRPQ010001481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3436
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4564642"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..584)
                     /locus_tag="VFD73_16895"
     CDS             complement(<1..584)
                     /locus_tag="VFD73_16895"
                     /inference="COORDINATES: protein motif:HMM:NF017046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P N-terminal domain-containing
                     protein"
                     /protein_id="HZI75659.1"
                     /translation="MRIALAGLLLLLSVPGAAVAQGQDIGKAEYAARRDSLAARIDSG
                     VVVAFGAPEPTGIHKEPQLAAFRYLTGFLEPNAAFLLVKRGGTVQSFLFTATRDPRRA
                     LYDGFPPDSAAVAQQTGLQVRSLPAFGPAVDSLVQAGLPVYDLRDFASSDAEDADSLT
                     RGSRFIADLKSRHPGLRVEDAHAIVDQLRARKSPA"
     gene            complement(654..1763)
                     /locus_tag="VFD73_16900"
     CDS             complement(654..1763)
                     /locus_tag="VFD73_16900"
                     /inference="COORDINATES: protein motif:HMM:NF025755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-transfer associated ATP-grasp
                     domain-containing protein"
                     /protein_id="HZI75660.1"
                     /translation="MQRVTKLIDDTREARRHGGIGPARIARDLIVLNLTHWLGVRAYF
                     QYRLFDPSLTLQEKSEYLPDSRWATERLWSLLTPRRYRLPFDNKLIFNRVFGGAGLPV
                     PSLLGVYDPEVGETVDGRPLRTADDLQSWLRTAPADGFVFKPVWGIGGSQVLVFTGSA
                     PDNSETAVTLAGERVDAERLVEISRTPPKVEASAAVRSQTYLLEQRIVPHPRLVELAG
                     PTLSCVRVVTLIALDGVPTILGAVFKIQPEPLGIDHLSYGAIGSWVDLERGTLSAGRS
                     RHHFGYTAVIPGTHRGFIGFQLPHWAEVKRIAVQAATVMPWARAIGWDIGISERGPIL
                     IEGNAEWSTALLQIPAPRGLMTGELKRLYDKLSPA"
     gene            complement(1810..3003)
                     /locus_tag="VFD73_16905"
     CDS             complement(1810..3003)
                     /locus_tag="VFD73_16905"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family peptidase"
                     /protein_id="HZI75661.1"
                     /translation="MRHAGVVCACLAVGSTSVGCNNPTAPDPFRPEAVFPDLSSKSEV
                     AIPNRYIVVLKTDVPDVAAETSRQVRRYGGSLHFAYSKSLKGYAATFPAGAIQGLRRN
                     PHVSYIEPDRLVSGGYVQTPVKSWGLDRVDQRALPLNDSYAYSRTGRGVHIYVIDSGI
                     RRTHVDFGGRALSGVDEVHDGYGTNDCNGHGTHVAGTAGGSTYGVAKRVTLVAVRVLG
                     CDNQGSWSAIIAGVDWVTAHAVKPAVANMSLGGMAARAVDDAVAGSIKSGIVYTIAAM
                     NNDADACNYSPARLPAALTVAASDNTDRRASFSDYGSCVDLFAPGVAITSAFNTSDYA
                     TAVYYGTSMAAPHVAGAAALFLQANPGATPAQVVTALLNATTRNRISNPAPNTPNRLL
                     YTNGT"
BASE COUNT          634 a         1065 c         1145 g          592 t
ORIGIN      
        1 gccggagatt tccgcgcccg cagttggtcc acgattgcgt gcgcatcctc cacccgaagt
       61 cccggatggc ggctcttcag atcggcgatg aagcgtgacc cgcgggtgag ggagtccgca
      121 tcttccgcat ccgacgaagc gaagtcccgg aggtcgtaca ccgggagtcc cgcctgcacc
      181 agcgaatcca ccgccggccc gaacgccgga agcgagcgaa cctggagacc ggtctgctgg
      241 gccaccgccg ccgagtcggg aggaaagccg tcgtacagcg cccggcgggg atcgcgggtg
      301 gccgtgaaca gaaagctctg gaccgtgccg ccccgcttca ccaggagaaa cgccgcgttc
      361 ggctccagga atccggtgag atagcggaac gcggcgagct gcggctcctt gtggatgccg
      421 gtcggctccg gcgcgccgaa cgccacgacc acaccgctgt cgatcctggc agccagcgaa
      481 tcgcgccggg cggcgtattc ggctttcccg atatcttgtc cctgcgccac cgccgcaccg
      541 ggtaccgaga gcaacagcag caggcctgcc agagctatcc gcatcgaaga gtccgtcaaa
      601 agaggttgcg atggcaccgg agtaaccggt gaatcctacc cgcggaacga tctttacgca
      661 ggagagagct tgtcgtacag ccgtttgagc tcgccggtca tgagcccacg cggagcgggt
      721 atctgaagga gtgcggtcga ccactcggca tttccttcaa tgagaatcgg acctcgctcg
      781 gagatcccta tgtcccaacc aatggcgcgg gcccagggca tgaccgtcgc ggcctggacg
      841 gcgatcctct tgacctcggc ccagtgcgga agctggaacc cgatgaagcc tctgtgggtg
      901 ccgggaatca cggcggtata gccgaagtgg tgacgggaac ggccggcgct gagcgtgccc
      961 cgctcgagat cgacccagga gccgatcgca ccatagctca aatgatctat cccgagtggt
     1021 tcaggctgaa tcttgaacac cgcgccgaga atggtgggca ctccgtccag agcgatcagg
     1081 gtgaccactc gcacacagga cagcgtcggt cccgcgagct ccaccagccg gggatggggc
     1141 acgatccgct gctcgagcag atacgtctgc gaccggactg ccgccgaagc ctccaccttg
     1201 ggaggagtgc ggctgatctc caccagccgc tcggcgtcga ctcgctcacc cgccagggtg
     1261 acggcggttt cggaattgtc cggtgcggag ccggtaaata ccagcacctg tgaacccccg
     1321 attccccaga ccggcttgaa cacgaaaccg tcagccggcg cggtccgaag ccacgattgc
     1381 agatcgtcgg cggtccgaag cggccggccg tcaacggttt ctccgacttc aggatcgtag
     1441 acgccgagca gcgacggcac cggaagtccg gcaccgccga agacccggtt gaagatcagc
     1501 ttgttgtcga acggcagccg gtaccggcgc ggggtcagca gcgaccagag ccgctcggtg
     1561 gcccagcggc tgtcgggcag atattccgat ttttcctgga gcgtgagact gggatcgaac
     1621 aagcgatact ggaagtaggc tctgacgccg agccagtgag tgagattgag tacgatcagg
     1681 tcccgcgcaa tgcgggccgg cccgatgccg ccgtgccggc gggcttcccg agtatcatcg
     1741 atcagcttcg tcacccgctg cacgatcgaa ttggcttcct cgattaggcg ccggctcgca
     1801 tcgcgccagc taggtgccat tggtatagag cagccgattg ggggtgttcg gagcgggatt
     1861 gctgatccgg ttccgggtgg tggcgttcag gagcgcggtg accacctgag ccggcgtggc
     1921 gccgggattc gcttgcagaa agagggctgc cgctcccgca acgtgcggtg ccgccatcga
     1981 tgttccgtag tagacggcgg tggcgtagtc gctggtgttg aacgcggaag tgatcgccac
     2041 tcccggcgcg aacagatcga cgcagcttcc gtaatcggaa aaggatgccc tgcgatcggt
     2101 gttgtcgctg gcggctacgg tgagggcggc aggcagtcgt gccggtgagt agttgcaggc
     2161 atcggcgtcg ttgttcatgg cagcgatggt gtaaactatg cccgacttga tcgatcctgc
     2221 cacggcgtca tccactgccc gcgccgccat gccccccaga ctcatgttgg ccacggcggg
     2281 cttcacggca tgggcggtga cccaatccac tcccgcgatg atcgccgacc acgagccctg
     2341 gttgtcgcag ccgagcaccc ggaccgccac cagcgtcacc cgcttggcca ctccgtaggt
     2401 cgagccgccg gcggtgccgg ccacatgggt cccatggccg ttgcagtcgt tggtgccgta
     2461 tccgtcgtgg acctcatcta ccccggacag cgcgcgaccg ccaaagtcca catgggtgcg
     2521 gcggatgcca ctgtcaatga catagatgtg tactccccgt ccggtccgcg aataggcgta
     2581 actgtcattc aacgggagcg cgcgctgatc cactcgatcc agtccccacg atttcaccgg
     2641 cgtctggacg tagccgccgg agaccagtcg gtccggctcg atgtagctga cgtgcggatt
     2701 gcgccggagg ccctgaatcg ctccagcggg gaaagttgcg gcataacctt tcagcgactt
     2761 gctgtaggca aagtgaagtg atcctccgta gcgcctgacc tggcgggatg tctcggctgc
     2821 aacatcgggg acatcggtct tcagaaccac gatgtagcga ttgggaatgg cgacttcgga
     2881 cttgctggag aggtccggaa ataccgcctc cggacggaaa gggtccggcg cagtggggtt
     2941 gttgcaaccg acgctcgtcg atcctacggc aagacaggcg cagaccacac cggcgtgtcg
     3001 catgttgcct ccggacgggc gggcatgact gtccatgccc tcacgtgagt ggggaggggg
     3061 tcagttttct cctgcagcaa tcggtgagaa gcgggaggtt gtcgtcccgc ggacttcggg
     3121 tcagcccgga gatcgacgtg atcgcgctgt cacctcaggc ggcgagggtt cgtcgcaaga
     3181 gacgagagcc agcgatgcag tgggctatga aagttgtggg ggagttcaga atatcgggtg
     3241 ctcggcgggt cagtcaagcg ggacgactta cagaccggaa ggctcgagct ggcggactcg
     3301 acggccccgg tgaaccactc gaagtaatgt gttaccgacc ccagcgccag tcgttagcgt
     3361 tgcgaaccaa tcaaagcact cggaaggttg ccggtaggga cggattatgg tgatccggcg
     3421 ctggtgctgc tcctcc
//
LOCUS       DASRPQ010001482         1057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1760582, whole genome shotgun sequence.
ACCESSION   DASRPQ010001482 DASRPQ010000000
VERSION     DASRPQ010001482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1760582"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..373)
                     /locus_tag="VFD73_16910"
     CDS             complement(<1..373)
                     /locus_tag="VFD73_16910"
                     /inference="COORDINATES: protein motif:HMM:NF016024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rad52/Rad22 family DNA repair protein"
                     /protein_id="HZI75662.1"
                     /translation="MSFTAEQCRALTAKLDGRAIRERIQAGQTLSYIEGWYVIAEANR
                     VFGFDSWDRETVSLRCVWEGPRQGRAICAYIAQVRIRVRAGETLICRDGHGSGMGSGS
                     TPGEAHEAAVKEAETDATKRAL"
     gene            complement(373..882)
                     /locus_tag="VFD73_16915"
     CDS             complement(373..882)
                     /locus_tag="VFD73_16915"
                     /inference="COORDINATES: protein motif:HMM:NF017386.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siphovirus Gp157 family protein"
                     /protein_id="HZI75663.1"
                     /translation="MTQANPFRDLIARDKALVLALARDFPEADEETLADTIEGASDLS
                     ALLTAVLRSRLEDLSLAEALRHRLDVMRGRLERLEGRAEQKRVLVSTALQEAGIRKLV
                     APEFTAYLRPSPSKLIVTDETLVPPEFWVAQQPRLDRQQLLSAVRSGREVPGAVLANS
                     ELTLAVRSQ"
BASE COUNT          194 a          342 c          318 g          203 t
ORIGIN      
        1 ccagcgcccg cttggtggca tcggtctcgg cctccttgac cgcggcctca tgggcctcgc
       61 ctggcgttga tccgctcccc atgccgctgc catggccgtc ccggcagatc agggtctcgc
      121 ccgcacgcac gcggatccgc acctgggcga tataggcgca aatggcacgg ccttgcctcg
      181 gtccctccca gacgcagcgc aagctgacgg tttcgcgatc ccagctgtcg aagccaaaga
      241 cccggttggc ctcggcgatg acataccagc cctcgatata ggagagcgtc tgtccggcct
      301 ggatgcgctc acggatggcc cggccatcta gcttggcggt gagagcgcgg cattgctcgg
      361 cggtgaagct catcactggc tccgtaccgc gagtgtcagt tcggaattgg ccagcaccgc
      421 ccccggcacc tctcggccgg agcgcactgc cgacaacagc tgctgacggt ccaaccgcgg
      481 ctgctgcgcc acccagaact caggcgggac gagggtctca tcggtgacga tcagcttgga
      541 agggctggga cgtaagtaag ccgtgaactc cggcgccacc agcttgcgga tccccgcctc
      601 ctgcagggcg gtgctgacca gcacgcgttt ttgctcggcg cggccctcta ggcgctccaa
      661 ccgcccgcgc atcacgtcca ggcgatgccg tagcgcctcg gctaagctca aatcctccag
      721 gcgtgagcgc agcaccgccg ttagcagggc cgatagatcg ctcgccccct cgatggtatc
      781 ggcaagggtc tcttcgtcgg cttcggggaa gtcacgggcc agcgctagga ccagggcctt
      841 atcgcgggca atcagatcgc gaaatgggtt cgcttgtgtc atggacatag ccttatctgg
      901 tatactcttt taacgagtag aaatatataa tagtgcacgc gacaggtcaa gccaacttcc
      961 tagcttttat ggcgaaagtt gcacccgaaa gtgtgctaat ttaagcactg aagacttacg
     1021 gttgatcccg aacaattcat tgagagttct gccgggt
//
LOCUS       DASRPQ010001483         2674 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2711575, whole genome shotgun sequence.
ACCESSION   DASRPQ010001483 DASRPQ010000000
VERSION     DASRPQ010001483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2674
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2711575"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..316)
                     /locus_tag="VFD73_16920"
     CDS             complement(<1..316)
                     /locus_tag="VFD73_16920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75664.1"
                     /translation="MSTTVPSAETIKTLIQNAFADTPYPGDDALVRSAGDEPDEVVDL
                     FRGRTDWRALSPDFVDRAGAASPSALSFFSAGAFRFYLPAYLIADLDRKLMYTDPLFY
                     LYF"
     gene            578..1129
                     /locus_tag="VFD73_16925"
     CDS             578..1129
                     /locus_tag="VFD73_16925"
                     /inference="COORDINATES: protein motif:HMM:NF016246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HZI75665.1"
                     /translation="MLTIRTVGHSTRPIQDFLDVVAAYDIELVADVRRFPGSRRLPQY
                     QQPALESALAAAGISYAWLPGLGGRRRPVSHSRNSAWRHPAFQGYADYAMSEEFAAAL
                     GELIMLAQGLRTAIMCAEILWWRCHRRIIADVLVSLRVTVIHILDARSASAHQLTTPA
                     RLVDGVLSYSLPNLVRSATSRRT"
     gene            complement(1081..2049)
                     /locus_tag="VFD73_16930"
     CDS             complement(1081..2049)
                     /locus_tag="VFD73_16930"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZI75666.1"
                     /translation="MGATTRDIFGQAQSAEPATPGSYGEHPQGHRLPATTRLGPVHLQ
                     VADLSRSLAFYERVLGLEPVERNSDGASLAPQGTHAPLIVLHEHRGAQAVPRRGALGL
                     YHFAILLPDRPALGRFLRHLGDLGARAGAADHLVSESLYLQDPDNLGIEVYADRPRGT
                     WRRVDRELMMATDPLDIEGLLEAAGSVQWSGMPVGTTMGHVHLHVGDIAQASAFYSEG
                     LGFDRMVWHYPGALFLAAGGYHHHLGTNTWAGSGAAPARPHDARLLEWTIELPDAASV
                     NAVHENLARAGHSGDLRDDQTELVTRDPWGTQVRLLVADRTRLGKE"
     gene            complement(2090..2428)
                     /locus_tag="VFD73_16935"
     CDS             complement(2090..2428)
                     /locus_tag="VFD73_16935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75667.1"
                     /translation="MADEPLAQQLSNLRTLLDDVDARLSRAPAVPAGLEDLKRSVDTL
                     RTNMWAILSAGHGASASVRVERLKLRRAIEGIKAVRSGLTAPGATLHPEHVELQLIAR
                     ELADQIGKLR"
BASE COUNT          503 a          808 c          856 g          507 t
ORIGIN      
        1 caaagtacag atagaacaac ggatcggtgt acatcagttt gcggtcgagg tccgcaatga
       61 ggtacgccgg cagataaaac cggaacgcgc cggctgagaa gaagctcagc gctgaaggag
      121 aggcggcgcc ggcccggtcg acgaaatcgg gtgagagtgc ccgccagtcg gtccgtcccc
      181 ggaacaaatc gacgacctca tccggctcgt ctccggcact gcgaaccagg gcgtcatctc
      241 cggggtaggg ggtgtccgcg aacgcgttct gaatcagcgt tttgatggtt tcggcggacg
      301 gtactgtggt ggacatgagg ctcgccctcg agcactgcaa acgaggtgtt caacagacat
      361 atcgactgca accggtgagc cgctcgcctg agacggtacc ttccattgtt ccgtagatct
      421 ggcctccgct ccgaaatcta tcgattccag cgaggtgtac cgcagcttga gatcgcaaag
      481 agttcacagt tgcattcttg tattctccac agaccaggca cgaatacaat gatgtgccct
      541 caggtgagga tctgcagttg gtgacacggg agtttcgatg ctgacgataa ggacggtggg
      601 gcactcaacc cgaccaatcc aggattttct ggatgtggtc gcggcgtatg acatcgaact
      661 cgttgccgac gtccgccggt tccctggctc gcggcgcctg ccgcaatacc agcagccggc
      721 actcgagtcg gctctggctg ccgccggcat ctcctacgct tggctgcctg gtcttggggg
      781 ccgtcggcgg ccagtctcac acagccgaaa cagcgcttgg cgtcacccgg catttcaggg
      841 ctacgccgac tatgccatga gcgaagaatt tgctgcggcg ctgggtgagc tcatcatgct
      901 ggcccaggga ctccggaccg ccatcatgtg cgccgagatt ctgtggtggc gctgtcatcg
      961 gcgtatcatt gccgatgttc tggtctcgct gcgagtcacc gtgattcaca ttctcgacgc
     1021 gagaagcgcg tccgcccacc aattgacgac gcctgccagg ctggttgatg gagtcctgag
     1081 ctattccttg cccaatctgg tccggtctgc tacaagcagg cgaacctgag ttccccaggg
     1141 atcccgggtg accaactccg tctggtcatc gcgcagatcg cccgagtggc cggcgcgcgc
     1201 aaggttctcg tggacggcgt tcacgctcgc cgcatccggc agctcgatgg tccactcgag
     1261 tagccgggca tcgtgcggtc gtgccggcgc ggcaccgctt cccgcccagg tgttggtgcc
     1321 cagatggtga tgataaccgc cggcggcaag gaacagcgct ccgggatagt gccagaccat
     1381 gcggtcgaag ccgaggccct cggaataaaa tgcggaagcc tgcgcgatgt cgcctacgtg
     1441 gaggtgcacg tggcccattg tcgttccaac cggcattccg ctccattgaa cgctgccagc
     1501 cgcctcgagg agcccctcga tgtccagcgg atcggtggcc atcatcagct cgcgatcgac
     1561 tcgccgccag gtgccacgtg gccgatcggc atagacctcg ataccgagat tatcgggatc
     1621 ctgcaggtaa agcgattcgc tgaccaggtg gtccgcggcg ccggcgcgcg ccccgaggtc
     1681 tccgaggtgg cggaggaagc ggcccaaagc cggacgatca gggagcagaa tggcgaagtg
     1741 atagaggccg agtgctcccc gacggggcac agcctgcgcg ccccggtgct cgtgcagcac
     1801 gatgagtgga gcgtgggtgc cctgcggagc caggcttgca ccatccgaat tccgctcgac
     1861 cggctcgagt ccaagcacgc gctcgtagaa tgccagggag cggctgaggt cggccacttg
     1921 gaggtgtacc ggtccgagtc gggtcgttgc tggcagacga tgtccttggg gatgctcccc
     1981 gtagctcccc ggtgtcgccg gctcggcaga ttgagcctgc ccgaaaatgt cgcgagtggt
     2041 tgctcccatc acacacctct atccatgtta ggctgaaaca gccgcctctt cagcggagtt
     2101 ttccgatttg atccgcgagc tcccgggcaa tcagctggag ctcaacgtgc tctgggtgga
     2161 gagtggcccc tggcgcggtg aggccggacc ggacggcctt tatcccctca atggctcggc
     2221 ggagcttgag ccgttcaacg cggaccgacg cggaagcccc gtgtcccgct gagagaattg
     2281 cccacatgtt ggtccgcagc gtatcaaccg agcgcttcaa gtcttccaga cctgccggca
     2341 ctgccggtgc ccgcgaaagc cgggcgtcga catcatcgag cagcgtacgg aggttcgaga
     2401 gttgctgcgc gagcggctcg tccgccatat gggaatctca gttaaagaga agggataagc
     2461 gaaatcaaat gtaaagtatc agcctgacct cagtcatgac tgcagtggct ctaaagtcgc
     2521 gccgagcgca gttggtgacc tcgatcaccg cacgtgcctg ggcggagaac gtccgcaatt
     2581 ctgtgaccgg actcactgtc gggcaggtac atcgggagta cgctgtttga cgatgaagtg
     2641 accacctctt ggccggaggg ttgtatggca aggc
//
LOCUS       DASRPQ010001484         1009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4565177, whole genome shotgun sequence.
ACCESSION   DASRPQ010001484 DASRPQ010000000
VERSION     DASRPQ010001484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4565177"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..730)
                     /locus_tag="VFD73_16940"
     CDS             complement(<1..730)
                     /locus_tag="VFD73_16940"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZI75668.1"
                     /translation="MGFSYGFPPERSPHAALAALDKALMTQRVDWVLDVDIRTFFDSV
                     DHGWLMRMLTHRIADRRVLRLLERWLKAGLLESGRWEPVEVGTPQGSGISPILANVFL
                     HYAVDLWVHRWRRRSAAGQVIICRYADDLVIGCQHEAEARQLLAELKDRLAQFGLSLH
                     EGKTRLIEFGRFAAERRAAAGQRRPETFAFLGFTHYCGRTRSGRFVVKRKTQATRMVR
                     KLKAVRQDLLHRMHAPVREQHRWLG"
     gene            complement(666..>1009)
                     /locus_tag="VFD73_16945"
     CDS             complement(666..>1009)
                     /locus_tag="VFD73_16945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75669.1"
                     /translation="AALERAFRRQRRAASPGMDRVTVDDYERELEANLRRLHDRIHSG
                     QYWPKPVRRTYIPEADGGRRPLGIPALEDKIVQGVVAEVLNAVLRGRLHGVQLRFSAG
                     AQPACGFGCPG"
BASE COUNT          175 a          357 c          301 g          176 t
ORIGIN      
        1 ggccgagcca acgatgctgc tcccgcacag gagcgtgcat ccgatgcagc aggtcctgcc
       61 ggactgcctt caactttctc accatgcgcg tggcttgcgt cttccgtttg accacgaacc
      121 tgccgctcct ggtccttccg cagtagtgcg tgaagcccag gaaggcgaag gtctccgggc
      181 gtcgctgccc ggcagctgcc cgtcgctcgg cggcgaaccg cccgaactcg atcagccggg
      241 tcttgccctc gtggagcgac aggccgaact gcgccagcct gtccttgagc tccgcgagaa
      301 gctgcctcgc ctctgcctcg tgctgacagc cgatcaccag gtcatccgca taccgacaga
      361 tgatgacctg tccggctgcc gaccgccgtc gccaccggtg aacccacaga tcgacagcgt
      421 aatggaggaa gacgtttgca aggatcgggc tgatccccga tccctgcggg gtcccgactt
      481 ccaccggctc ccatcggccg ctctcgagga ggccggcctt gagccaccgc tcaagcaagc
      541 ggaggaccct gcggtcggcg atcctgtgtg tcagcatccg catcaaccat ccgtggtcga
      601 cggaatcaaa gaaggtgcgg atgtcgacgt cgagcaccca gtccacgcgt tgcgtcatca
      661 gggctttatc cagggcagcc aaagccgcat gcgggctgcg ctccggcgga aaaccgtagc
      721 tgaaccccat gaagtcggcc tcgtaaaacg gcgttcagca cctcggccac cacaccctgg
      781 acgatcttgt cctccagagc cggaatgcca agcgggcgcc ggccgccatc ggcttccggg
      841 atatacgtgc ggcgtaccgg cttgggccaa tactgtccgc tgtggatgcg gtcgtgcagg
      901 cgccggaggt tggcttccag ctcccgctca tagtcatcca ccgtcacccg atccatcccc
      961 ggactggccg ctcgtctctg ccgccggaat gccctttcga gcgcagcaa
//
LOCUS       DASRPQ010001485         1003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4565190, whole genome shotgun sequence.
ACCESSION   DASRPQ010001485 DASRPQ010000000
VERSION     DASRPQ010001485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4565190"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          174 a          358 c          302 g          169 t
ORIGIN      
        1 cgcctatgtt cgggcgggct ttcctgcgct tccatcagca cctcaccgtg atcgccggac
       61 tcttcagctc cggcggcaca gcacaagcgg caacgctcac cggccacggt cccagggcgc
      121 aggagcccgg caacggctcc cattcatgtg ctgcaaccgg gccacgcccg gcaagccagg
      181 ctggcccact tccctgatac gggtcatccg tggccaggcc agcagtggca atcaaatccg
      241 cgagacccgg taagaacacc ggcctcagaa cctacgcgcc gccacctacc ggaccagccg
      301 ggaagcccat gccacccgga acccccacgc cgatcaagcg ccggagttcc ttacatgaac
      361 ccgcgacccc ttgaccccca ggaatgcatc cgcccctgcg ctacctggtt gccgtcatgt
      421 tgatccaggt caaggcaacc acagccgagc aggtgccagc actgcatagc cccagcgaac
      481 gttcgcggtt cccactctgt tcccagcttg gaagccgcgt ctgaagttgg cggccagcag
      541 ctgggccgcc cgaggcgtgg ccttggccag gatgctggcc gcccgggcgc catgcgggcg
      601 cggaatccgg cggtcgacgg cccgccctgg cggaaggtgg cggaaccggg aagacttttg
      661 cggccgcatt tgccctgttc agggcaggtt ttcgtagata cttacgatgc gcccccagca
      721 ggattcgaac ctgcgcacac ggctccggag gccgatgctg gtgctaggtc aactgccgca
      781 ctgacctgcg gcttcgctgt tcggggagac cggcgtcgca cggtctctct cgctagtctc
      841 gcgtagtcgt agtatcgctt cggagtgaac caccagctag tggtgtcagg ctccgctcgg
      901 accgagctcg gcggactgcc cggagtacac ccgacgcttc tcattgtctg gatctccctc
      961 ggccgacgag acctcgagcg atctctcgag ataatgcgtc agc
//
LOCUS       DASRPQ010001486         1719 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1104367, whole genome shotgun sequence.
ACCESSION   DASRPQ010001486 DASRPQ010000000
VERSION     DASRPQ010001486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1104367"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..1356)
                     /locus_tag="VFD73_16950"
     CDS             complement(13..1356)
                     /locus_tag="VFD73_16950"
                     /inference="COORDINATES: protein motif:HMM:NF033540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HZI75670.1"
                     /translation="MKSAGMGVTIVSIVSEAEEGDPAMTKARDPVPTVAFIDDYCAHY
                     RSVFPNVRQFEQFTHLELGLTAETKRKSLPRLAQTAKADPQALHHFLAEADWSVEQVR
                     ARRLEVTRQALRERPFILCIDETGDRKKGKTTDYAASQYIGNIHGLANGVVSVNAYGV
                     LDTVTFPLACRIDKPERRLKPGDVFKSKPQLAVELIQELATQGFHFSVVLADSLYGES
                     YDFTSALERLGLSYVVAIRSNHVVWTFPGERVRQTRWRPFERVFTDGTTEQRYRCEFV
                     FGKRTRTRYFAITTDPVHLPPETTWNIMTNLPGKIERSVGNTFGLRTWIEYGFKHAKD
                     ELGWADYRLTDAHSIERWWELVMCAYLLVSLQAPALAAPPPAPQSPAETSQHPAWTED
                     ASWKHRLTNLRLLLQPFVCSCLLLPWLRLYPLPHLAAGLADLCALMNTYHPTFPT"
BASE COUNT          327 a          490 c          580 g          322 t
ORIGIN      
        1 atccctcttc tgtcaagttg ggaaggtcgg gtggtaggtg ttcatgagcg cgcagaggtc
       61 agcgagaccg gcggcgaggt gcgggagggg gtagagtcgg agccaaggga gcaggaggca
      121 ggagcagacg aagggttgga gcagcagccg cagattggtg aggcggtgct tccagctggc
      181 gtcctcggtc caggccggat gctgactcgt ctcggctggc gattgaggag cgggcggagg
      241 cgctgccaac gcgggcgctt gcaagctcac cagcagatag gcgcacatca ccagttccca
      301 ccagcgctca atactgtgcg catccgtgag ccggtaatcc gcccacccca gttcgtcctt
      361 ggcgtgcttg aagccatact cgatccacgt gcgcaggcca aacgtattgc ctacgctccg
      421 ctcgatcttg ccgggcagat tggtcatgat attccaggtg gtctccggcg gcagatgcac
      481 gggatcggtc gtaatcgcaa agtagcgggt gcgcgtgcgc ttgccaaaga cgaactcgca
      541 gcggtagcgt tgctcggtcg tgccatcggt gaagacgcgc tcgaagggcc gccagcgcgt
      601 ttggcgcacc cgctcaccgg gaaacgtcca gaccacgtgg ttggagcgga tcgccaccac
      661 gtaggacagg cccaagcgct ccaaggcaga ggtgaagtcg taactctcgc cgtacaggct
      721 gtcggcgagc acgacactga agtggaagcc ctgggtggcc agttcctgga tgagctccac
      781 cgccagttgg ggcttgctct tgaagacatc gcccggcttg aggcggcgct ccggcttgtc
      841 gatccggcag gcgagcggaa aggtgacggt gtcgagcaca ccgtaggcgt tgaccgagac
      901 caccccgttg gcgagtccat ggatgttgcc gatgtattgg ctggcggcgt agtcggtagt
      961 tttgcccttc ttgcggtcac cggtctcgtc aatacagagg atgaacgggc gctcccgcag
     1021 cgcctggcgc gtcacctcca ggcggcgcgc acgcacctgc tccacggacc agtcggcttc
     1081 ggccaggaaa tggtggagcg cttgcgggtc ggctttggcg gtctgcgcca ggcgagggag
     1141 ggatttgcgc ttggtctcgg ccgtcaagcc gagttcaaga tgcgtgaact gctcaaactg
     1201 gcgtacgttg ggaaacaccg accggtagtg cgcgcaatag tcgtcgatga aggccaccgt
     1261 ggggacaggg tcgcgggctt tcgtcatggc gggatctcct tcctctgcct ccgacacgat
     1321 cgatacgatg gtgacaccca tgcctgcaga cttcatgccc actttgacag aagagggatt
     1381 aaccccattt ttgaccccaa ttcacatcag cgagaagcca ctatcactgt ggagcagttg
     1441 ggtagcacgc tgggttgcct gccctgggag catgcaatgt tgtgagcgtc cgtagcaacc
     1501 cgctcgccgt gataccggct cggagtcgcc acgtgaggat aggtacgtca acacgaggcg
     1561 gcatgctcga cccgaagacg agaacacgaa cgatgtgtgt gcgccgacga ggccgcgtcg
     1621 cgccgtgtcg actgcgcgat cgctgcggta gctcactact ggatcaggag attgacgtca
     1681 aacaactgaa gggatatgat ggttccgtct gctagatgt
//
LOCUS       DASRPQ010001487         1268 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_479962, whole genome shotgun sequence.
ACCESSION   DASRPQ010001487 DASRPQ010000000
VERSION     DASRPQ010001487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1268
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_479962"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(169..873)
                     /locus_tag="VFD73_16955"
     CDS             complement(169..873)
                     /locus_tag="VFD73_16955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75671.1"
                     /translation="MFRQNRSKHIHAPEPSPFYFAPSVKRYSVSMSRAISIPDNISDD
                     DRQALIKNGLDQLRQNAQQSRDVIYSSLLVAAGGLATFSIILLGTVITLGSLDVALQI
                     SLSAFAVVVPLLAASYWSLKIWYTTLDARPEAHSGLTKEQQERLSASSNFSTGEFRGD
                     SKEYAVFITTISYAQLLTFIPVSFIALVGVASILWHAFWIASVIFVIAAALGCSFIAW
                     SFEQRSTLSFFDRQAR"
     gene            965..>1268
                     /locus_tag="VFD73_16960"
     CDS             965..>1268
                     /locus_tag="VFD73_16960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75672.1"
                     /translation="MTMVAPGRHPGLGIKAGQGRSGLVAVAPAGLGQPVTEPSGVILQ
                     LAAQPSQVEAQVVGTPSHRPIATGRDPARPAQPSRSQPADFADSWSNAAMACCRCLI"
BASE COUNT          277 a          373 c          384 g          234 t
ORIGIN      
        1 ctgcccgtcg atgccggtat cagccgtcca gaacacgatc tcgccggtct cctggttgat
       61 cagccgcagg cgctcatagt cggcctgatc cgccagtgcc tcggcgatct ccccgaggtc
      121 caggctgctc agctcaagca ccaggccagg atagatccgg ctcgcccctc accgtgcttg
      181 cctgtcaaaa aacgacaaag ttgatcgctg ctcgaaagac caggcgatga agctgcaacc
      241 aagggcagct gcgatcacga atattacgct agctatccag aacgcatgcc agagtatgct
      301 tgcaaccccc acgagtgcta taaaactaac cgggatgaac gtcaatagct gagcgtacga
      361 aatcgtagta ataaagacag catattcctt gctgtctccc ctgaattctc cagtagaaaa
      421 attggaagag gcgctcagcc gttcctgctg ctctttggtg agcccactat gcgcttccgg
      481 cctggcgtcc agtgtggtgt accagatctt gaggctccag tacgaagcgg ccagcagcgg
      541 aacgacgaca gcgaatgcgg agagagaaat ctgcaaggcg acgtccaggg acccgagggt
      601 gatcacagtt cccagcagaa tgatactgaa ggtggccagt cctccggccg ctaccagcag
      661 cgaagaatat atgacatctc tcgattgctg cgcgttctgg cgtagctgat ccaggccgtt
      721 cttgatcagg gcctggcggt catcgtcaga tatattgtcc ggtattgata tggctctgga
      781 catggacacc gaataccgct tgacggacgg cgcgaaataa aaaggagacg gttcaggggc
      841 gtggatatgc ttggatcggt tctgccgaaa cataggagcc tcctaacggc aggcaggacc
      901 atgacgccgg gcatgaatgc gtggcggccg gtcagcgtga gccgctagct ggactagacg
      961 cactttgacg atggtagctc ctggaagaca tcccgggctc ggcatcaagg ctggtcaggg
     1021 caggtcaggg ttggtagcgg tagcccctgc cgggctcggt cagccggtga cggagccgag
     1081 cggggtaatc ctccagcttg cggcgcagcc gagccaggtg gaagcgcagg tagttggaac
     1141 gccctcccac cgcccgatcg cgaccgggcg ggacccggcc cgcccggcgc agccatcacg
     1201 atctcagcca gcggacttcg ccgacagctg gtcgaacgcc gcgatggcct gctgccgctg
     1261 cttgatca
//
LOCUS       DASRPQ010001488         2125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2985578, whole genome shotgun sequence.
ACCESSION   DASRPQ010001488 DASRPQ010000000
VERSION     DASRPQ010001488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2125
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2985578"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1831)
                     /locus_tag="VFD73_16965"
     CDS             complement(<1..1831)
                     /locus_tag="VFD73_16965"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HZI75673.1"
                     /translation="MTQTVPHVPDSTLDLREEVERLRLMHSIGLEFSASLDFDELIPR
                     VFQRVLTALGAEGGSLWIADGDMLCCRLAQGGASQKLIGAKMPVGTGFIGDVAQRPHT
                     TVVTRAVDDPRYQAQVDSGEMLALTVMATAMVAGGVTVGAIQVSNKLTGDGICDERDR
                     ELLEGLAASAATALRNAQLHTVETRARDLALLLEISREITATLDLDRVLRSVVNLASR
                     ALAFDRGAVGLYQKGQCEIRAVAGQDTVDPKDPKLQDLIARAAWAAGQGEPLYLSDRT
                     APGSDAERMFVSIFDPDLERDGVQSGVYLPLKDEEGVLGVLVFEASQPDFATPVQLEL
                     AGILANQTAVALRNAQLYHQVPMVDALGALAAKRQAFQAVPRRKLQIYAATAVVVLAV
                     LSLVRWPLRVSGTDAVFRPMMLTPVRALVPGVVERLLVQEGARVTKDMPVATLRASQL
                     LSEQAATAAEVSAADRAAALAASRGDAAEERLQRIRGDALRQEQQLLDQEVGLTTIRA
                     PISGVVLTPHLSEKVGTSLDEGDLVLTIGRTDTLVLEFGVDQRDIARVTPGQEIRLRV
                     DALPQRTFDGTVSSIGLLPMDTTAKVLYPVRAYVPNPDGLLKPE"
     gene            complement(1946..>2125)
                     /locus_tag="VFD73_16970"
     CDS             complement(1946..>2125)
                     /locus_tag="VFD73_16970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75674.1"
                     /translation="VTIQEDSVENSKEQFRIHLTPEQKSQVRDATGKDAEAVELSVEE
                     LEERIAPSKVKKLGL"
BASE COUNT          382 a          707 c          636 g          400 t
ORIGIN      
        1 tctcgggctt caagagtcca tctggattgg ggacataggc tcgcaccgga tagagcactt
       61 tggcggtcgt gtccattggg agaaggccga tggagcttac ggtaccatcg aacgtccgct
      121 gcggcagagc gtccactctc aaccggatct cctgacccgg agttaccctc gcgatatcgc
      181 gttgatcgac tccgaactcc agcaccaggg tatcggtacg gccgatggtc aggaccagat
      241 ctccttcgtc cagcgaagtt cccacctttt ccgagaggtg cggggtcaac actacaccgc
      301 tgatgggggc ccgaatggtg gtgagcccaa cctcctggtc gagcagctgc tgctcctgac
      361 gcagtgcgtc acctcggatc ctctgtagcc gctcctcggc ggcatcaccc cggctggcgg
      421 cgagtgcagc ggcccggtcc gcggcactca cttctgccgc ggttgcggcc tgctcgctga
      481 ggagctggct tgctcggagg gtggccaccg gcatgtcttt ggtcacccga gctccttctt
      541 gcaccaacag acgctcgacc acgcccggca ccagggctcg caccggcgtc agcatcattg
      601 gacgaaagac cgcatcagtg ccgctgacgc ggagcggcca ccgtaccaaa gagagcaccg
      661 ccaataccac cactgctgtt gcggcatata tctggagttt tcgtctcggg accgcctgga
      721 acgcttggcg cttagcggcg agcgccccca gggcatcgac cattggcacc tggtggtaca
      781 gctgggcgtt gcgcagcgct accgcggtct gattggcaag tatccctgcc agctccagct
      841 gaaccggagt ggcaaagtcc ggttgagagg cctcgaatac caggaccccc agcaccccct
      901 cctcatcttt gagcggaagg tagaccccgc tctgcacccc atctcgctcg agatcgggat
      961 cgaagatgga gacgaacatg cgctcggcat cagatccggg cgcagtccgg tcactaagat
     1021 agagcggttc tccttggccg gccgcccacg ctgcccgcgc aatcaggtcc tgaagcttgg
     1081 gatccttcgg gtccacggtg tcctggcctg caacggccct gatctcgcac tgacccttct
     1141 gataaaggcc caccgccccg cggtcgaacg ccagcgctcg ggaagccaga ttcactaccg
     1201 accgaagtac tcggtccagg tcgagggtgg cggttatctc gcggctgatc tccagcagca
     1261 gagccaggtc ccgcgcacgc gtttcaaccg tatgcaattg ggcgttgcgc agggcggtag
     1321 cggcgctcgc ggcgagaccc tcgaggagct cccgatcacg ctcgtcgcaa attccgtcgc
     1381 cagtgagctt gttcgacacc tggatggcac ccaccgtcac tccgccggcg accatagcgg
     1441 ttgccatgac ggtcaaggcc aacatctctc ccgagtcgac ctgggcctgg tagcggggat
     1501 cgtctactgc gcgggttacg actgtggtgt ggggccgctg ggctacgtct ccgataaagc
     1561 ccgtgcccac cggcattttg gcgccgatca gcttctgact ggctccgcct tgcgccaggc
     1621 ggcagcacag catgtcgccg tcggcaatcc acagcgaacc gccctcggct cccagcgcgg
     1681 tcagcacccg ctggaagacc cgcgggatca gctcgtcgaa atccagcgac gcgctgaact
     1741 ccaggccgat ggagtgcatc agccggagcc gctcgacctc ttcccggagg tcgagagtac
     1801 tgtcggggac atggggaact gtttgcgtca tcactcgatt cgacaggcca acggtaggct
     1861 tacacgacaa catagctctg gtgccggggc ccgtaagggg ctcggcacca gagcgatcaa
     1921 cttcagctgc taactaccgc tgcaactaca gaccgagctt cttcaccttg gatggggcga
     1981 tccgctcctc gagctcttcg accgagagct ccaccgcttc cgcatcctta ccggtggcgt
     2041 cacgaacttg gctcttctgc tcgggggtca gatggatccg aaactgctcc ttagaatttt
     2101 ccacagagtc ctcctggatt gtgac
//
LOCUS       DASRPQ010001489         1488 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4565716, whole genome shotgun sequence.
ACCESSION   DASRPQ010001489 DASRPQ010000000
VERSION     DASRPQ010001489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1488
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4565716"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..443)
                     /locus_tag="VFD73_16975"
     CDS             complement(<1..443)
                     /locus_tag="VFD73_16975"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI75675.1"
                     /translation="MSAAIADRIKNVVLVHGGFVDGSGWLDVYRGLKQQGFTVSVVQN
                     PTTSLPDDVRVTRITLAQQDGPVILVGHSYGGAVITEAGNDPSVMALVYIAAFAPDAG
                     ESVATLIADPAPGAPVPPILPPQDGFLFLENSKFAASFAADVDPEL"
     gene            complement(469..1365)
                     /locus_tag="VFD73_16980"
     CDS             complement(469..1365)
                     /locus_tag="VFD73_16980"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI75676.1"
                     /translation="MVNTVNAGVPRPAAAATNITAPTQFIETKLETYAYRRFGAGDAP
                     PLVCLQHFTGTLDNWDPAVTDPLARTREVILFESAGLGRSSGEVPTTMAGMAAHALAF
                     LDTLGLKQVDLLGFSLGGMVAQEIALKQPALVRKMLLVGTAPRGGEDIMHLEKPELKR
                     ILEDPNLPGFKRLGKLFFTPSEKSQAAGDAFVARLGQRKQDREPVSGPKVAQAQVTAF
                     RAWEGATAERFRYLQRITQPCLVVNGVFDDMISVRNSYMLSEHLPNAMLLTYPDAGHG
                     SLFQYPESFVRQTSLFLNEELR"
BASE COUNT          251 a          467 c          482 g          288 t
ORIGIN      
        1 agctcaggat cgacgtccgc ggcgaaggag gcggcgaact tgctgttctc caggaagaga
       61 aaaccatcct ggggtggcag gatcggcggt actggagctc ctggagccgg gtcagcaatc
      121 aaggtggcga ccgactcccc ggcatccggt gcgaaggctg cgatgtagac cagcgccatc
      181 acgctgggat cgttgccggc ttcggtgatc actgccccgc cgtatgagtg accgaccaga
      241 atcaccgggc cgtcctgttg tgccagggtt atgcgggtta cccgcacgtc gtcgggcagt
      301 gacgtcgtgg gattctgaac cacgctgaca gtgaacccct gttgcttgag accgcgatat
      361 acgtcgagcc agccggagcc gtccacgaag cctccgtgga cgagaacgac gttcttgatg
      421 cggtcggcga ttgctgctga catagcttgg ctccttgggg gttgttgatt accggagctc
      481 ttcattcaga aagagtgaag tctgcctgac aaacgactcg ggatactgga acagcgaccc
      541 atgccccgcg tcgggatagg tcaacagcat ggcattgggc aggtgctcgc tcagcatgta
      601 ggagttccgg accgagatca tgtcgtcgaa cacgccgttc accacgaggc acggttgcgt
      661 gatccgctgg agatagcgga agcgctcggc agtagcgcct tcccaggcgc ggaacgcggt
      721 gacctgagcc tgggcaacct tgggtccgga gaccggctcc cggtcctgct tccgttgccc
      781 aagccgcgcc acgaatgcgt cgcctgccgc ctgacttttc tcactaggcg tgaagaagag
      841 cttgcccagt cgcttgaatc cggggaggtt ggggtcctcg agaatccgct tcaactccgg
      901 cttctccagg tgcatgatgt cttctccgcc ccggggagcg gtgcctacca ggagcatctt
      961 tctcaccaga gccggctgct tcagcgcgat ctcctgcgcc accatgccgc ccagggagaa
     1021 accgagtaga tccacctgct tcaggccgag tgtgtcgagg aaggcgagcg cgtgcgctgc
     1081 catccccgcc atggtggtgg ggacctcgcc gctcgagcgg ccgagacctg cgctctcgaa
     1141 cagaatcacc tcgcgagtcc tggcgagtgg atcggtgacg gcggggtccc agttgtccag
     1201 cgtgccggtg aagtgctgca ggcagaccag cggcggcgcg tcacccgctc cgaaccggcg
     1261 gtaggcgtag gtctcgagct tggtctcgat gaattgcgtg ggcgcggtga tgttggtcgc
     1321 cgcagcggcc ggccggggaa cgccggcatt cactgtgttc accatactct atctccgtac
     1381 ttgtaggtgc ctgatccggt gctccgcccc gtcactccga tccggtgaca accttccggc
     1441 tctccggctc tccggctctc cggctctccg gctctccggc tctccggc
//
LOCUS       DASRPQ010001490         2772 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4565797, whole genome shotgun sequence.
ACCESSION   DASRPQ010001490 DASRPQ010000000
VERSION     DASRPQ010001490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2772
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4565797"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(213..452)
                     /locus_tag="VFD73_16985"
     CDS             complement(213..452)
                     /locus_tag="VFD73_16985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75677.1"
                     /translation="MTATKPQISTSNGRRAGLDAVRHSSRADHPAAAPPALVRDIDRI
                     LLDHGIDLPKADIKAALAWLLSGSYGDTIGGPTSP"
     gene            complement(917..1144)
                     /locus_tag="VFD73_16990"
     CDS             complement(917..1144)
                     /locus_tag="VFD73_16990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75678.1"
                     /translation="MGKLEEITAAQEAWRDAKGAYDDEAAKYIGVAWLPSIARLGPVD
                     GVTREASEKLTQLGEAEQAAAAAFFAAFDDT"
     gene            complement(1313..2155)
                     /locus_tag="VFD73_16995"
     CDS             complement(1313..2155)
                     /locus_tag="VFD73_16995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75679.1"
                     /translation="MSATFTQLTTRRGLSRAVIASAILASAVVVWGGYTGHWSWTGLT
                     QNGTLWDWLKLLALPLSLAALPLWLQSHQHMSVIRRWTLGAVAVAFGLLVLLGYSLHW
                     TWTGFAGNTLWDWLELLLLPVIIATVKFWTAERSLQTRHWIATAVVMIGFAAFAACAY
                     LLPITWTGFVGNTMWDWIKLLFIPILMPLVLVPAVTEWISAGISEPTVGAEPTEDAEP
                     TDEANPSGQPVPGGYSPVSYEIWLSPTEKIIAEVRPPADPADGPALIVNEAVTVHRLM
                     ATTN"
     gene            complement(2310..>2772)
                     /locus_tag="VFD73_17000"
     CDS             complement(2310..>2772)
                     /locus_tag="VFD73_17000"
                     /inference="COORDINATES: protein motif:HMM:NF014961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="vitamin B12 dependent-methionine synthase
                     activation domain-containing protein"
                     /protein_id="HZI75680.1"
                     /translation="ADFFRAEDSGELDVVAFTVITVGDKISEFTHQLFEANAYRDYLE
                     AHGLSVQLTEALAEYWHRRIREELVLPSGVTAASEDPANVEDFFKLGYRGARYSLGYG
                     ACPDLEDRSKIVSLLRPERIGVQLSEEFQLHPEQSTDAIVVHHPEAKYFNT"
BASE COUNT          488 a          892 c          879 g          513 t
ORIGIN      
        1 gaacaacaca ccctcgagct gaactcccgc agttgctcgc ctccgactat ttcgcgacat
       61 cacgggtacc catcagcgag ccggctgcca agtcactgtt gctagatgtc atgcgccgag
      121 acactagggt ccgatgctgg gcggtatcga ttggctttaa gctcctgact ctgatgacag
      181 ctctcggact cggcatcatc ggagagatgc gactacgggc tggtagggcc tccgatcgtg
      241 tcgccgtagc tgccgctcag tagccacgcc agggcggcct tgatatcggc cttcggcagg
      301 tcgatgccgt gatctagcag tatccggtcg atgtcgcgca cgagcgccgg aggtgctgcg
      361 gcggggtgat ccgctcgact agagtgcctc accgcatcga gccctgcccg tcgcccgttg
      421 ctggtcgaaa tctggggttt ggtggcggtc atgtcaggtt ccggaccgat acaccgccgt
      481 tgcctgacga tgctcgtaga tgcagtaaac cgaagcaggt ctgcgcctag tacgtagtgg
      541 aggaccactc cgacgtgtag tgacgttacc gttcttcgct tctcaggacc aatttgggtt
      601 gtttgtcagc ccgcacaaac gccgcccaag cgggcctcgc catagagctg gacgcgccac
      661 caggcagtcc ctcacagtgg cggccccagc cttcctatct gtgcttgcgt tgcacccacg
      721 gtgtgggcaa gactgtccgg cgcggcccgg ctcggcaacg aagccggtca cggggggccg
      781 accaaaacgt cagcacgaac aggggccccg cgcacccaag acgtgggtgg gcggggtgac
      841 tctcgttctt cgcatcgcct agctctcgtc ccgtcgagag ctcacgaacc acaggtacgg
      901 ggctcacgtg ctgcggtcag gtgtcgtcga aagccgcgaa aaaggcggca gcggctgcct
      961 gctccgcctc acccagctgc gttagcttct cgcttgcctc gcgtgtcacc ccgtcgaccg
     1021 ggccgagtcg ggcgattgag ggcagccaag ctaccccgat atatttcgcg gcttcgtcgt
     1081 cgtaagcccc cttggcgtcc cgccaagcct cctgtgccgc ggtgatctcc tcgagtttgc
     1141 ccatgcttgc cccccgatct cgtggcgaat gtttaccctc gcgtcccgct gttctaaccg
     1201 tctcgcccag agagcagagc gccccgccag ccccgacccc tggggtaatc aggacgcccg
     1261 gcgttgctgt ccgaccggta gcgctccgtg cgcgggtggc gagcccttag ctctagttcg
     1321 ttgtcgccat caggcggtga acggtgacgg cctcgttgac gatcagcgca ggaccgtcgg
     1381 ccgggtcagc cggcggacga acctcggcga tgatcttctc ggttgggctc agccagatct
     1441 cgtaactgac tggcgaatat ccgcctggta ccggttgccc ggacggattc gcctcgtcgg
     1501 tcggctcggc atcctcggtc ggctcggcgc ccacggtcgg ctcgctgatg ccggcgctga
     1561 tccactcggt taccgccgga accagtacca gtggcatcag gatcggaatg aacaggagct
     1621 tgatccaatc ccacatcgtg ttgccgacga acccggtcca ggtaatcggc agcaggtatg
     1681 cgcaggcggc gaaggcggcg aacccgatca tcaccaccgc ggtcgcgatc cagtggcgag
     1741 tctgcaggga gcgttccgca gtccagaact tgaccgtcgc gatgatgacg ggcagcaaca
     1801 gcagctctag ccagtcccag agggtgttgc cggcgaagcc ggtccatgtc cagtgcagcg
     1861 agtagccgag caggaccaga aggccgaatg ccacggcgac ggcgcccaac gtccagcgcc
     1921 ggatcacgct catatgctga tgcgattgca gccacagcgg taacgcggcc aacgacagcg
     1981 ggagcgcgag caatttaagc caatcccaca atgtgccgtt ctgggtgagc ccggtccagg
     2041 accagtggcc ggtgtagcca ccccagacga ccacggctga cgcgagaatc gcgctggcta
     2101 tgacagcacg tgataggcca cggcgggtgg tgagttgcgt gaatgtggcg gacatgagaa
     2161 cgctccgacg agtagcgaca acattggctt gcttcagcat cggcgcgtct cggcattacc
     2221 gctgtcgccc atccggggga tgtccagcag gatccgcgct acccccaatc gggggaggcg
     2281 agccttgatc gccgttagct cgatcgccgt tacgtgttga agtacttcgc ctcggggtgg
     2341 tggacgacaa tggcgtccgt cgactgctcc gggtgcagct ggaactcctc cgacagctgc
     2401 accccgatgc gctcgggccg gagcaggctc acgatcttgg agcgatcttc gagatccggg
     2461 cacgcgccgt agcccaggga gtaccgcgct ccgcgatagc ccagtttgaa gaagtcctcg
     2521 acgttggccg gatcctcgga tgcggcggtc actccgctcg gaagtaccag ttcctcgcgg
     2581 atccgccggt gccagtattc ggcgagcgcc tcggtcagct ggacggatag tccatgggct
     2641 tccagatagt cgcgatatgc gttggcctcg aacaactggt gggtgaattc gctgatcttg
     2701 tcccccaccg tgatcacggt gaaagcgacg acatccagct cgccggaatc ctcggcgcgg
     2761 aagaaatcgg cg
//
LOCUS       DASRPQ010001491         1250 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1762370, whole genome shotgun sequence.
ACCESSION   DASRPQ010001491 DASRPQ010000000
VERSION     DASRPQ010001491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1762370"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            313..762
                     /locus_tag="VFD73_17005"
     CDS             313..762
                     /locus_tag="VFD73_17005"
                     /inference="COORDINATES: protein motif:HMM:NF013607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75681.1"
                     /translation="MIVHFICRGNAFRSIIAEAYLNSLKFKNLRATSSGTAAAVDRAR
                     NLAAYTETLELLAKNGIQEFAKTDYGDQLTPSRLAGADVVICMNQRVFDECQHLVGLP
                     AGTRIWSVADIGEPGRVAHTEDGKTRYREEAYLQIVDGVGQLITELS"
BASE COUNT          240 a          388 c          394 g          228 t
ORIGIN      
        1 cgtgatcaag ttcgccgaca ccgcggccga tgtgtacgcg cgcaccggca atccgggcgt
       61 cctcgcggcc gccatccgcg ccacccacct gatcgaccgc tgaccgttga gtggctgtgc
      121 ggacacacgc gcgggcgatg accttgacgc ggaggcgcgg cgatgacgca aactctgtac
      181 atcacattgg tcgtctcagt aacgtgcgcg cttgtgatct cggtctgggt ggtggcccgt
      241 gcaggttgac tcgctcaggg accagctggc acacatgcag cacctcccgg aggaagtcga
      301 gtaggcccgg gaatgattgt ccacttcatt tgccggggca acgcatttag gagcatcatt
      361 gccgaggcct acctcaactc actcaagttc aagaacctga gggctacatc aagcgggacc
      421 gcggccgcag tcgacagggc cagaaacctg gctgcgtaca ctgaaacact tgagctgctt
      481 gcgaagaatg gcatccagga atttgctaag actgattatg gagaccagct gactccgtcg
      541 cgcctggccg gggcggacgt ggtcatctgc atgaatcagc gagtgttcga tgaatgtcag
      601 cacctcgtcg gccttcctgc tggcacgcgc atatggtcgg tggctgatat cggcgaaccg
      661 ggcagagtcg cccataccga ggacgggaag acccggtacc gggaagaggc ctacctccag
      721 atagttgatg gcgtcggtca gctcatcaca gagctttcct agggtgcttg ccgcccggca
      781 cggtgattcc cgcgttgcca ccgtgaacac tgccccaccg tctgggagtc cggctccatc
      841 agggatgacc ggcaggcgca cgatcgcggc atccgggcgt gcccgtcagt aaatactgca
      901 taacgctggt cgctgacatg tccgtcgggc gggacccacg tcgccagcgc tgggtgtccg
      961 aggtttgcgg caagctgcag ggaggtaccc gcggcgcgga gggtatcagc agctcgcttt
     1021 gaggtatcgc gcctggtcat cgagcccaag tcgtgctcac gttcccggtc atcgcgaccg
     1081 ccgcgcccag acgtgcgatg tatcagcgga gaagggctcg cctctgcata ggtagaactc
     1141 tcccgcgggg gcaggagagc aaagcgaaag ggtcacctca aatgcgccga ttccgatcac
     1201 tcgccacccg gataccagtc ctaatcatct cgatgctcgc ggtcgccctg
//
LOCUS       DASRPQ010001492         1115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3337837, whole genome shotgun sequence.
ACCESSION   DASRPQ010001492 DASRPQ010000000
VERSION     DASRPQ010001492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3337837"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(453..734)
                     /locus_tag="VFD73_17010"
     CDS             complement(453..734)
                     /locus_tag="VFD73_17010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75682.1"
                     /translation="MAPRWIETKNYQDTVFEPAQPEDDWLLISGQFVIGRVLRDRSGP
                     QAGRYSWSPTGPHGAPIGNHGIVNTFEEAQDALLASWRRWQQWAGVRDA"
BASE COUNT          178 a          377 c          342 g          218 t
ORIGIN      
        1 gtagcaaggc gttctcgagc cgttcgctgg ctcgctgctc atgaaacctt ccccctacgg
       61 aatgcattag ggttccgcct ggctgagaca ggcacctcgt gtgggccccg ggggaggcca
      121 acccccgggg ctctttctca ctggcttagg cgtgccattc cgcatctcag cgggtgcacc
      181 ggcctgtgca catcggggat cttacgacgc tgggcattcc gccggccgat ggaccggtct
      241 agcttcggcg cgaccactga aagtcgccgg tggtcaacga agtcgaagga gagcccgggc
      301 ccccactacc cagccgggct cttctttgag tcctgagccg aaccgaccag ccaagctcct
      361 gcgggtatgg ttttagggtg ggtggtgacc agctcccacc cgcaagactt gagccccggc
      421 aggcctcgca cagccgcggc cggggctttc tttcaggcgt cccgcacccc cgcccattgc
      481 tgccatcggc gccagctcgc gagcagcgcg tcttgggcct cttcgaacgt gttgactatc
      541 ccatgattgc cgatcggcgc cccgtgcggc ccggttgggg accaggaata gcggcccgcc
      601 tgcgggcccg agcggtcgcg cagaacgcgg ccgattacga actgccccga gatcagaagc
      661 caatcatcct ctggctgcgc cggctcgaag accgtgtcct ggtagttctt ggtctcgatc
      721 catcggggtg ccacgtcact tctcgtcggg gacagtgacc acctccctac atgcgcggca
      781 tacgtagctc ttctcacccg gatgatacag cacgcggggc actattcgat ccaattgcat
      841 ccggcgtccg catttcgagc atagaggcgg attgcctgtg gtagcggtcg tttcatcgcc
      901 catcgcgatg cggtccgaaa ccggcggcgc gccgaaggca ccggcggctc acgcgcagag
      961 ttcgttgaag atgcgatttc ggtcggctct gtgcatcttc agcgatgctc gaaatgtcgc
     1021 gcctagcgcg cgcgacatgt cggcgtcgat gccggctcgc tccaacatgg ccactctctc
     1081 ggtctgctgt gcaacgtgac gctcaccctc agcta
//
LOCUS       DASRPQ010001493         1667 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_796088, whole genome shotgun sequence.
ACCESSION   DASRPQ010001493 DASRPQ010000000
VERSION     DASRPQ010001493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_796088"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            296..1303
                     /locus_tag="VFD73_17015"
     CDS             296..1303
                     /locus_tag="VFD73_17015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75683.1"
                     /translation="MMADKRPGLDSRRLIRLMSEAIDRCHLDLSGLTVLTEAATGAYV
                     VTPVIAAMAGADVYALAAGTAYASSGEIEKLTAEVARLAAVTDRIQLICRKDNSVVGS
                     ADIVTNSGQVRPIDAEMVAAMKLSSVVPLMYESWEYRHADVDLRACRDRHIAVAGTNE
                     RHPNVDVFSFLGQMAIMQLHDAGIAVRRSRVLLLCDNDFGTFIAHDLRNAGAHVVESS
                     RLTIDVISPRYDAVILARQPQEAPVFGADDAKLLSEAAPGAVLVQYWGDADRAALAAA
                     GVPVWPAEAPRAGHMGILPSAVGPEPIVRLQAGGLKVGQVLAQGLDRASPEDLAYVQV
                     L"
     gene            1327..>1667
                     /locus_tag="VFD73_17020"
     CDS             1327..>1667
                     /locus_tag="VFD73_17020"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HZI75684.1"
                     /translation="MDAVVLLGMGPTALSALESLAPEFRVAGLVRSSSGGDDEVIERA
                     RTLDVPVYSDLSIEGIERAIIQSSPDCVVVSSYDRILPSRILDRCRFVNVHYAALPEY
                     RGRANVNWAVI"
BASE COUNT          292 a          493 c          563 g          319 t
ORIGIN      
        1 ctccgccagg gcggtctcgg ccatctcccg gtaatccagg cgtcgctgac agctgggtgt
       61 agccgcaggc ggtgcccgca ggcgggccga cggccccgtg gacacgcggc cgggcgtcag
      121 caactgagtc gtgctggcag gtcaaggaac gccgttgcgc ttggcgggaa caggaacggc
      181 cgggaatggg agggtcggcg gcaactagaa tgctatctta gcggtggcgt cgccgttaat
      241 ccgagtagat gcgtacggtg atcaagccgc caccggcgac tttggggata agtgcatgat
      301 ggctgataag cgtcctggcc tcgattcacg gcggttgatc cgcttgatga gcgaggccat
      361 cgatcggtgc cacctcgatc tatccggcct tacggtgctc acggaggccg ctaccggagc
      421 gtacgtggtg acgcccgtga ttgccgccat ggcgggcgcg gacgtctatg cgcttgcggc
      481 tgggacggct tacgcttcca gcggagaaat tgagaagctc actgctgagg tcgctcggct
      541 ggcggcggtg acagaccgga tccaactgat atgccgtaaa gacaattccg tcgtaggttc
      601 ggccgatatc gtcaccaaca gcggccaggt ccgtccgatc gacgcggaga tggtggccgc
      661 catgaagctg tcctctgtcg ttccgctgat gtacgaaagc tgggaatacc ggcacgcgga
      721 cgttgacctg cgggcctgcc gggaccgcca catcgctgtg gccggaacca acgagcggca
      781 cccgaatgta gatgtctttt cctttctggg gcagatggca ataatgcagc ttcacgacgc
      841 gggaatagcg gtcagacgga gtcgcgtgct gctgctctgc gacaacgact tcggaacatt
      901 tattgcgcac gatctgagga acgcaggagc gcacgtcgtg gagtcgtccc ggctgactat
      961 agacgtgata tcaccgcgct acgacgcggt catcctggcc cggcagccgc aggaagcgcc
     1021 agtattcggt gctgacgacg caaagctgct gagtgaggca gcgccaggcg cggtcctggt
     1081 ccagtactgg ggggatgcgg atcgtgcggc gctcgccgcc gccggcgttc ccgtatggcc
     1141 agctgaagcc ccacgcgctg gtcatatggg tattcttccg tctgctgtcg ggcccgagcc
     1201 gatcgtccgg ctccaggccg ggggcctcaa ggtcggacag gtgctggcgc agggtctaga
     1261 tcgagcatcg ccggaggacc ttgcctacgt ccaggtactc tagatccgtc gctggtaggg
     1321 ggagacatgg atgccgttgt gctgctcggg atgggtccca ccgccctgag cgccctggaa
     1381 tcgctggcac cggaattccg ggtcgccggt ctcgtccggt cctcttctgg aggagacgat
     1441 gaggtcatcg agcgcgcccg taccctggat gtgccggtat attccgatct cagcatcgaa
     1501 ggtatcgagc gggcaatcat tcagagcagt cctgattgcg tcgtcgtctc ttcgtatgac
     1561 cggatactgc cgagccggat cctcgaccgc tgccggttcg tgaacgtgca ttacgctgcc
     1621 ctgcccgaat accggggacg cgccaacgtt aactgggccg ttataaa
//
LOCUS       DASRPQ010001494         3596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2714056, whole genome shotgun sequence.
ACCESSION   DASRPQ010001494 DASRPQ010000000
VERSION     DASRPQ010001494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3596
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2714056"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..451)
                     /locus_tag="VFD73_17025"
     CDS             complement(<1..451)
                     /locus_tag="VFD73_17025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75685.1"
                     /translation="MNRRDSDSFSAPNWLTLLGPLPLDVVPRRQPVASPELMASPRGA
                     AIAGWEQLVLHLSAGAAGLRTILVVLDADGTLLSASDSVLYRTGANQSASPRGPDMIL
                     QLSVGGRFEEDGSFHGTRWHSVAADPDTDNEPEWESTPSEPSPDDVDG"
     gene            complement(479..988)
                     /locus_tag="VFD73_17030"
     CDS             complement(479..988)
                     /locus_tag="VFD73_17030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75686.1"
                     /translation="MPISLPYRFDTSPVVQLILRGVLGLLVLVIAPGILYSVFFSHNQ
                     GAAVLLLVIGVLTIYFGRLFLRNLMTSRGTITAEAVEVEPGVLFGASLQGPRGRFPIR
                     QFRAVLVQRISPWGQIQERQHERVILAGQAGAPDILVARTGNDAGRALGRDLAAALGL
                     PYTEETAPY"
     gene            1049..3238
                     /locus_tag="VFD73_17035"
     CDS             1049..3238
                     /locus_tag="VFD73_17035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HZI75687.1"
                     /translation="MLLSLCVVFATILQASGQQAPSAEQARWEHEAQAVVIVRDDWGI
                     AHVHGKTDADAVFGMIYAQAEDDFNRIETNYLNSIGRLAEAEGEKAIWQDLRMKLFVD
                     PDSMRATYSRSPVWLKRLMTAWADGLNYYLHTHPEVRPRVLSRFEPWMGLTFTEGSIG
                     GDIESIALDQLQAFYGDSSDRPEPIDSPGAPAGQSGSNGFAIAPANTVNHRALLLINP
                     HTTFFFRSELQMTSDEGLNAYGAATWGQFFLYQGFNDRLGWMHTSTGADAIDEYAETV
                     IRRGSRLYYRYGRSQLPLRVRRIMVPYRTPGGMANRTFTVYGTHHGPIVRAADGKWIS
                     VRLMQKPIEALEQSYLRTKSRTLAQYRKVMDLHANSSNNTVYADADGHIAYFHPQFVP
                     RRDPTFDWTQPVDGSNPATEWHGVHGIEDSPHVIDPANGWIQNVNNWPYSAAGPYSPS
                     RAKFPAYMDNAGESPRGLHAIRVLEGRKDFTLDRLRDAAFDSYLTAFAELLPPLISAY
                     DSMRPGDTLTARLAEPISVLRNWDDRWSAGSIATSLAVYWGEALADVIAAEAKATSLS
                     SYEYMRTRGRPAERLAALIVACDRLTQDFGSWKTPWGEINRFQRLTGDLVQPFSDSAP
                     SIPVPFPSAQWGSLASFRAKAYPGTKRRYGTSGNTFVAVVEFGKDSVRARAVSAGGES
                     GHPGSPHFDDQAERYASGNLREVYFYPGQLTGHTESSYHPGEPVSSK"
     gene            3322..>3596
                     /locus_tag="VFD73_17040"
     CDS             3322..>3596
                     /locus_tag="VFD73_17040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75688.1"
                     /translation="MRLLALVIPVLLLGNSAPPKSGEQLIRQMHHRYVGKWYHNLTFT
                     QTTTFPDRPAETWYEAGSIPGKLRIDIAPLDSMNAFMYVGDSAIVFQG"
BASE COUNT          722 a         1126 c         1111 g          637 t
ORIGIN      
        1 gaccatccac atcatcaggg ctgggctcac ttggtgtgga ctcccattcg ggctcgttgt
       61 cggtatcggg atcagcagca accgagtgcc agcgagtacc gtgaaagctc ccgtcttcct
      121 cgaatcggcc gccgacgctg agttgaagta tcatgtcggg cccacgaggg gacgcacttt
      181 ggtttgctcc cgttcggtac agcaccgagt ccgaggcgct gagcagggta ccgtcggcgt
      241 cgagtaccac gagaatcgtc cggagaccgg cagccccggc cgagaggtgc agtaccagct
      301 gttcccatcc ggcaatcgcg gctccccggg ggctcgccat caactcggga gacgcgaccg
      361 gctgtcgcct gggtactaca tccagtggca gtggtcccag cagcgtgagc cagttggggg
      421 cggagaacga gtcggagtca cgtcgattca tggtccagcg cgggctgcag tgagatgctc
      481 agtacggagc agtttcttcc gtatacggca aacctagcgc agcagccaga tcccggccca
      541 gcgcccggcc cgcgtcattc cccgtgcggg ccacgagaat atcaggtgcg ccggcttgac
      601 cggccaggat cacgcgctcg tgctggcgct cctgtatttg accccatggg gagatccgtt
      661 gaaccagcac ggcacggaac tgccgaatag ggaaccgacc tcgcggtccc tgaagtgaag
      721 ccccgaagag caccccgggc tcgacctcga ccgcctccgc cgtgatggtt ccccgcgatg
      781 tcatgaggtt tctgaggaac aggcgtccga aatagatcgt gagcacgccg atgaccagca
      841 gcaaaacggc ggctccttgg ttgtgggaaa agaagacgga gtagaggatg ccgggggcga
      901 tcaccagcac caggagcccg agaacgccgc gcaggattag ctgaacgacc ggactggtgt
      961 cgaagcgata gggcagcgag atcggcatgt atccgaaata tgctaccttt gtgccggtgt
     1021 gagctttgtc gtgagccgaa gagaatccat gctcctgtct ttatgtgttg tattcgcgac
     1081 cattctgcaa gcttctggac agcaggcgcc gagtgcggag caggctcgct gggagcacga
     1141 agcccaggca gtggtgatcg tccgggatga ttggggaata gcccacgtcc acggaaagac
     1201 cgatgccgac gcggtgttcg gaatgatcta cgcgcaggcc gaggatgact tcaatcggat
     1261 cgagaccaac tacctgaatt caattggccg actggccgaa gcagaggggg agaaagcgat
     1321 ctggcaggac ctcaggatga agctgttcgt ggatcccgac agcatgcgcg ctacgtactc
     1381 tcgaagtccc gtctggctca aacgcctgat gaccgcctgg gccgatggcc tcaactacta
     1441 cctccacact cacccagagg tgcggccgcg ggtgctcagc cgattcgagc cctggatggg
     1501 gctcaccttt accgagggaa gtatcggagg ggatatcgag agcatcgcat tggaccagct
     1561 gcaggcgttc tacggcgata gttcggaccg tccggaaccg atcgactccc caggcgcgcc
     1621 agccggacag tccggttcca acgggttcgc aattgcgccg gcgaacacgg tcaatcaccg
     1681 ggcgcttctc ctcatcaacc cgcacaccac gtttttcttt cgctccgagc tgcagatgac
     1741 cagcgacgag gggctcaacg cctacggcgc cgccacttgg ggccaattct tcctctacca
     1801 ggggttcaac gatcgacttg gctggatgca cacctccacc ggcgccgacg ccatcgatga
     1861 atacgccgag acggtgatcc ggcgtgggtc ccggctgtac taccgatatg ggcggtcgca
     1921 gttgccgctc cgagtaagac gcataatggt cccgtatcgg acgccgggcg gaatggccaa
     1981 ccggacgttc accgtgtacg ggactcatca tggtccaatc gtgcgggctg ctgatgggaa
     2041 gtggatcagc gtgcgactca tgcagaagcc gatcgaagcg ctggagcagt cgtatctccg
     2101 cacgaagtcc cgaaccctgg cgcaataccg caaggtgatg gacctgcacg ccaactcgtc
     2161 caacaacacg gtctacgccg acgccgatgg ccacatcgcc tacttccacc cgcagttcgt
     2221 ccctcggcgg gaccccactt tcgactggac ccaaccggtg gacggaagta atcccgccac
     2281 cgagtggcac ggggtccacg gaatcgaaga cagccctcac gtgatcgatc cggcgaacgg
     2341 ctggatccaa aacgtcaaca actggccgta ctccgccgca ggtccgtaca gtccctcgag
     2401 agcgaagttc ccggcctata tggacaacgc gggtgagagt ccccgtggct tgcacgcaat
     2461 ccgggtattg gagggaagga aagactttac cttggaccgg ctgcgcgacg cggcattcga
     2521 cagctatctc accgcgttcg ctgaattact gccgcccctg atcagtgcgt acgactcgat
     2581 gcgcccaggc gacacgctga ccgcccgact ggccgagccg atctcggtgc tgcggaactg
     2641 ggatgatcgc tggtcggcgg gctcgatcgc cacatcgctg gcagtgtact ggggcgaagc
     2701 cttggccgac gtcatcgcgg cagaggcgaa ggcgaccagc ctctcgagct acgagtacat
     2761 gagaacgcgc gggcgaccgg cggagcggct cgcagccctc atcgtggcgt gcgatcgtct
     2821 gactcaggac ttcggaagct ggaaaacccc atggggcgag atcaaccgct ttcagaggct
     2881 caccggtgac ctggtgcagc cattcagcga ctcggcgccc agcataccgg tgccattccc
     2941 ctcggcgcag tggggatcgc tcgcctcgtt ccgggccaag gcctatcccg gtacgaagcg
     3001 aagatacggc acgtcgggca acacgttcgt tgcggtggtg gaattcggga aggacagtgt
     3061 ccgggccagg gccgtgagtg cgggtggtga gagcgggcat cccggctcac cgcacttcga
     3121 cgaccaggcg gagcgctacg catcaggcaa cctgcgcgag gtgtacttct atccgggtca
     3181 gctcaccggt cataccgaga gctcatatca ccccggtgag ccggtctcct ccaagtaagg
     3241 ccaaccccgc ttagaaactc tgaaactgga ctgccgtagg atgtatggcc catcaatatg
     3301 tctcacacac ccggaggttt cgtgcgactg ctcgctttgg tcattcctgt tctgctgctc
     3361 ggtaactccg ccccacccaa gagcggggag caactcattc gccagatgca ccaccgctat
     3421 gtcgggaagt ggtaccacaa tctcaccttc actcagacca ccacgtttcc cgaccgcccg
     3481 gcggaaacct ggtatgaggc tggctccatc cccgggaagc tccggatcga tatcgccccg
     3541 ctcgacagca tgaacgcgtt catgtatgtc ggcgactccg ccatcgtgtt ccaggg
//
LOCUS       DASRPQ010001495         1219 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3338172, whole genome shotgun sequence.
ACCESSION   DASRPQ010001495 DASRPQ010000000
VERSION     DASRPQ010001495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1219
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3338172"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..547
                     /locus_tag="VFD73_17045"
     CDS             <1..547
                     /locus_tag="VFD73_17045"
                     /inference="COORDINATES: protein motif:HMM:NF045432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75689.1"
                     /translation="IEHPDWCVLDLDPKGAPMRDVVAVAQATHDLCEKLRLPNYVKTS
                     GSSGLHVMIPLGCQCRHDEARSFGELLARLINAELPEISTLARQVSRRDGKVYIDYLQ
                     NGAGRLIVVPFSVRPLPGAPVSTPLRWSEVTPELDIRNYTIRNLPARMRKLKRDPLHG
                     VLRLQPDLASVLDRVKQLAHD"
     gene            540..>1219
                     /locus_tag="VFD73_17050"
     CDS             540..>1219
                     /locus_tag="VFD73_17050"
                     /inference="COORDINATES: protein motif:HMM:NF042734.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta family hydrolase"
                     /protein_id="HZI75690.1"
                     /translation="MTEAADLRLQISESAGDVAGFLLRPPEAWLLYVLAHGAGAGMRH
                     PFLEAISASLAARGVATFRFQFPYMEAGRRRPDPPRLLEETVRAAVSKAEDIVPELPV
                     IAGGKSLGGRMTSSAAATGPLPRVKGLAFLGFPLHPPGDPGTRRAEHLQQVHLPMLFL
                     QGTRDSFARADLIAEVCRNLQPRATLHSVEGADHSFGVLKRTGRSAAQVLDELAATIV
                     SWARPLVG"
BASE COUNT          208 a          402 c          380 g          229 t
ORIGIN      
        1 gatcgaacat cccgactggt gcgtgctcga tctggatccc aagggcgcgc cgatgcgtga
       61 cgtggtggcg gtcgcccagg caacccatga cctctgtgag aagctccgac tgcccaacta
      121 cgtgaagacc agcggctcgt ccggactgca cgtcatgatt ccgctgggct gccagtgccg
      181 ccatgacgag gcgcgcagtt tcggcgagtt gctggctcgg ctgatcaatg cagaattgcc
      241 agagatctca acccttgccc ggcaggtctc ccggcgcgat ggaaaggtgt acatcgatta
      301 cttgcaaaac ggggccggcc ggctgattgt ggtcccgttc agcgttcggc cgctccctgg
      361 agctccggtc tccaccccac tccgctggag tgaggtgact cccgagctgg acatccgcaa
      421 ctataccatc aggaacctgc cggcccgcat gcgcaagctg aagcgcgatc cgctccacgg
      481 tgtgcttcgg ttgcaacccg atctggcctc ggtcctagac cgggtgaaac aactggccca
      541 tgactgaggc ggccgacctc cgtctccaga tcagtgaatc cgctggagac gttgccggct
      601 ttctcttgcg tccacccgag gcctggctgt tgtacgttct cgcgcatggg gccggggccg
      661 ggatgcgcca cccctttctg gaagcgatct cagcatcatt ggcggcgcgc ggagtcgcca
      721 cctttcgttt ccagtttccc tatatggaag cgggccggcg ccgtccggat cccccacggc
      781 ttctggaaga aaccgttcgg gcggcggtca gcaaggcgga agacatcgta cccgagctgc
      841 cggtgattgc gggtggcaag tcgctgggtg gacgaatgac gtcgagcgcc gcagcaaccg
      901 gtcctttgcc gcgagtaaag ggactggcct tcctcgggtt tccgctgcac cctccaggag
      961 acccaggaac ccgccgagcc gagcacctgc aacaggtaca tctgccaatg ctctttctcc
     1021 aaggcacgag ggacagtttc gcccgcgcgg atctgatcgc cgaggtgtgc cggaacctcc
     1081 aaccccgagc gacgcttcac tccgtcgagg gagccgatca ttcgttcggg gtgctcaagc
     1141 gcactggccg atccgctgcc caggtgctcg atgaattggc ggcgaccatc gtctcctggg
     1201 cccgacccct ggtcggcga
//
LOCUS       DASRPQ010001496         2061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2714412, whole genome shotgun sequence.
ACCESSION   DASRPQ010001496 DASRPQ010000000
VERSION     DASRPQ010001496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2714412"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            259..993
                     /locus_tag="VFD73_17055"
     CDS             259..993
                     /locus_tag="VFD73_17055"
                     /inference="COORDINATES: protein motif:HMM:NF021487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HZI75691.1"
                     /translation="MKPAADVAPDWQMRIPDSEWAVYSRVIREIRLAGIRFAFGGAFA
                     TAVYTHQLRNTKDFDFYILPADRERMEQALTRAGLHDHFERLSYDRNWIYRASQDDVI
                     VDAIWQMANYRAQVDEQWLARGPEIVIRGEALRAIPIEELIWSKLYVLQRERCDWTDV
                     FKLIDAQTASIDWDHLLDRLADDAPLLAGALEVYSWLAPDRAGRIEQRVWERLRLPYP
                     TLITNSELSRARADLLDSRPWFRTPE"
     gene            1019..1819
                     /locus_tag="VFD73_17060"
     CDS             1019..1819
                     /locus_tag="VFD73_17060"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HZI75692.1"
                     /translation="MNHPGRDVLHEIEWIAGMGLGFIDLTLEPPLAASWKVDPGTIRS
                     ALEANRLGVVGHTAFYLPIASGIEEIRRAALNELRRCVDVFAEIGAQWMNVHPDHHAP
                     MHDRSFFVEKNRETLAALLPYARSRGVGVMLENLPGDFNTAREVGELLDPLPELGLHL
                     DIGHANLRVVRSTVEELLSAYGARLRHVHLHDNKGGSADLHLPLGTGTVDVRQAVRLL
                     QAHGYDGTITLEVFAPDLHHLSYSRDLLQQIWNEEQSGVIPTPASGRP"
     gene            complement(1788..>2061)
                     /locus_tag="VFD73_17065"
     CDS             complement(1788..>2061)
                     /locus_tag="VFD73_17065"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI75693.1"
                     /translation="AEAVQRLREQGDRIRLILLDLTMPVLGGAEAASELRRIHPGIPI
                     VAMSGYGDKEVMQRFGDVGVNEFLAKPFTPEQLAGKVRDVLTPVLE"
BASE COUNT          407 a          636 c          639 g          379 t
ORIGIN      
        1 ggttccctcc aggaccgagc ggatcacttc agcctggcct ggacggagct cttcgaatcc
       61 gaacgtggtt cgaagatacc ggcgcaactc gggcaccctg ggacgagagg tctttttatg
      121 ttgggaagcc atgggactcg cagaaaagat gcgtggagcc ggaaacatta cgaacgcggc
      181 cgattcctgg cgtgacggcc ctcacttccg agtgactctg atcacatctg ccatcgtgcg
      241 gagtgcctat caacaagaat gaagccggcc gccgatgttg cgcccgattg gcagatgcga
      301 atccccgatt ccgagtgggc ggtatactcg cgggtgatcc gggagatccg cttggctgga
      361 atccggtttg cgttcggagg ggccttcgcc accgcggtgt atacccacca actgcgaaat
      421 accaaggact tcgatttcta cattctgccc gccgacaggg agagaatgga gcaggcactg
      481 acccgggctg gtcttcacga tcatttcgag cggctgtcct atgaccggaa ctggatctac
      541 cgggccagtc aggacgatgt catcgtggac gccatctggc agatggccaa ctatcgggcg
      601 caggtggatg agcagtggct tgcccgcggt cctgaaatag tgattcgcgg tgaggcgttg
      661 cgcgccattc ccatcgagga gttgatctgg agcaaactgt acgtgttgca acgggagcgc
      721 tgcgactgga cagatgtctt caagctgatc gatgcccaga ccgcctcgat cgactgggac
      781 cacctgctgg accggctggc cgatgatgcc ccactcctcg caggcgcgct ggaggtatac
      841 agctggctgg cacctgaccg agccgggcga atagagcaaa gagtgtggga gcgcctccgg
      901 ttaccctacc ccacactgat caccaattcg gagctgtcgc gggcccgagc agacctgctc
      961 gacagccgac cctggttccg aacgccggag taggggtacc ggtatgctgg tcggagcgat
     1021 gaaccacccc ggacgcgacg tcctccacga aatcgagtgg atcgccggca tgggcctggg
     1081 attcatcgac ctcacactgg agccgccgct ggccgcctcc tggaaggtgg atccaggcac
     1141 aatccggagc gcccttgagg ccaaccgcct gggagtcgtc gggcacaccg cgttctacct
     1201 tcccattgcg agtggcatcg aagagatccg acgagccgcc ctgaacgagc tgcggcgctg
     1261 cgtggacgta tttgcggaga tcggggccca atggatgaac gtacaccccg accaccacgc
     1321 ccccatgcac gatagaagct tctttgtaga gaagaatcga gaaaccctgg ccgccctatt
     1381 accctatgcc cggagccgag gtgtgggggt tatgctggag aacctgcccg gagacttcaa
     1441 caccgcccgc gaggtgggag agctgctcga tccgctgccc gagctgggcc tccatctcga
     1501 catcggccac gccaacttgc gggtggttcg gagcaccgtg gaggagctgc tctccgccta
     1561 tggggcgcgg cttcgccacg tgcacttgca cgacaacaag ggtggatcgg cggatcttca
     1621 cctgccgctg ggcacgggaa ccgtggacgt ccggcaggcg gttcgtcttc tccaggccca
     1681 cggttatgac gggacgatca cgctggaggt atttgccccc gatctccatc acctgagtta
     1741 cagcagagat cttctccagc aaatctggaa tgaagagcag agcggagtca ttccaacacc
     1801 ggcgtcagga cgtccctgac tttgccggcg agctgctcgg gagtgaacgg tttggccaga
     1861 aattcgttta cccccacatc gccaaaacgc tgcatcacct ccttgtcgcc gtagccgctc
     1921 atcgccacga tcgggatgcc gggatgaatc cgccggagct cggaggctgc ctccgcgccg
     1981 ccgagaaccg gcatggtcaa atccagcaga atcaaacgta tgcggtcgcc ctgctcccgg
     2041 agccgctgga ccgcttctgc t
//
LOCUS       DASRPQ010001497         1176 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_181150, whole genome shotgun sequence.
ACCESSION   DASRPQ010001497 DASRPQ010000000
VERSION     DASRPQ010001497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1176
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181150"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..640
                     /locus_tag="VFD73_17070"
     CDS             <1..640
                     /locus_tag="VFD73_17070"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF013845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA dimethylallyltransferase"
                     /protein_id="HZI75694.1"
                     /translation="ARGSLPIIVGGTGLYVRSVVEGYQLTKALPDLALRDRLEQLTND
                     ELHQRLNELAPDAAEAIDPRNRRRIIRAVEIREQGFPFKTSHVNAPQHKFCQLGLTWP
                     RDVLRERIKARLRKRLDEGMIGEVRNLVDAGVSFSRLDALGLEYRFVARFLRGEYASE
                     EELFDELSRAIYRFAMRQLAWFRRDKSIIWLDHAKDYKQQAFELIESFIGQS"
     gene            794..>1176
                     /locus_tag="VFD73_17075"
     CDS             794..>1176
                     /locus_tag="VFD73_17075"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HZI75695.1"
                     /translation="MAKTQIIAEPGVPQLVVSSEFLAPRDLLFRAYIDPDLLRQWLGP
                     RRMSMTIDRFDPRDGGIWRFIHSDGDATDYGFHGLFHGDPSRERIVWTFEAEGFPGHV
                     CLETVTFGEHGDMTVVRQNTVYQSV"
BASE COUNT          219 a          383 c          361 g          213 t
ORIGIN      
        1 ggcccgcggc agcctgccca tcatagtggg cggtacaggg ctgtacgtgc ggtcggtggt
       61 cgagggatat cagctgacca aggcattgcc cgatctcgca ttgcgcgacc ggcttgagca
      121 gctgaccaat gatgagttgc accagcgtct gaacgaactg gccccggatg ccgccgaggc
      181 cattgatcca cggaacaggc gccgcataat ccgtgcggtc gagatcaggg aacaaggttt
      241 tcccttcaag acgtcacatg tcaacgcacc acagcacaag ttctgccaac tgggcctcac
      301 gtggccacgg gatgtcctgc gtgagcgaat caaggccagg ctccgcaagc gccttgacga
      361 aggcatgatc ggtgaggtca ggaatctggt ggacgcaggt gtctcgttct ccaggctcga
      421 cgcgctgggg cttgagtacc gctttgtggc gcgcttcctg cggggcgaat acgccagcga
      481 ggaagagctg ttcgatgagc tcagccgtgc catataccgc tttgccatgc ggcagctcgc
      541 atggttccgg cgtgacaagt ccatcatctg gctcgatcac gccaaggact ataagcagca
      601 ggcgttcgag ctgatagaga gcttcatcgg tcagtcttag ccggccggct cgggacgtcc
      661 ggtcccggct cagatccgcg cctccatccg gccttcactc cggccgcgcc ctgtatgcac
      721 acgtgccggt ttcgatgaca ggactcccat ggaactggca ccaagcggcc agacccagcg
      781 gaaaggagcc cccgtggcca agacacagat catcgccgaa cccggagtcc cccagctcgt
      841 ggtcagcagt gagtttctcg caccgcgcga cctgttgttc cgcgcctaca tcgatcccga
      901 cctgctcagg cagtggctgg gcccacgccg gatgagcatg accatcgacc gcttcgatcc
      961 ccgggatggc ggcatctggc ggttcatcca ctccgacggc gacgccaccg actacggctt
     1021 ccacggcctg ttccacggcg atccgtcccg tgagcgcatc gtctggacgt tcgaggccga
     1081 gggcttcccg ggccacgttt gcctggagac cgtcacgttc ggcgaacacg gcgacatgac
     1141 cgtggtccgc cagaacaccg tctatcagtc ggtcga
//
LOCUS       DASRPQ010001498         1804 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1443094, whole genome shotgun sequence.
ACCESSION   DASRPQ010001498 DASRPQ010000000
VERSION     DASRPQ010001498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1443094"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..914)
                     /locus_tag="VFD73_17080"
     CDS             complement(<1..914)
                     /locus_tag="VFD73_17080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75696.1"
                     /translation="MAVVFGLTRLSCTRAVAHLREGAPGVPIWLFTTVEPDPETAVLC
                     ERVEIHPGSLTLFLRAERMLWPHWVALSVGSWTGEHGKLPVKLAPFLIPPFRTLLQNR
                     NGDFFQGTPVRILAHCGRVAHDSAAQGWNGLREWLHASRVKTGERVRDASHAVGLRVL
                     YILGILLGWLGYPHCRIFPRMHGSEPLPVEVEPSTGSGIDRFEQKGTHWDAKGLEKLA
                     RSSDARWILWHEGPAIDLPELTAAETFAVSAQPYFRAWKPSLFPMAAFRTLQPGECSR
                     VLAPLGPSILVDRRKLLALGIPDCSLTGT"
     gene            complement(999..>1804)
                     /locus_tag="VFD73_17085"
     CDS             complement(999..>1804)
                     /locus_tag="VFD73_17085"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HZI75697.1"
                     /translation="MGIPLLEGRDFDARDEGKRMSVAIVNRKFATHFFGGQSPIGRHI
                     GFGDGPKSKLDIEIIGLVEDALYEGPREGVHRQVFVAQAQSNFPAGVSFYVRTSVDPK
                     SMFSALREKVRELDAALPVYDMKTLDRQLDETLGTERLVAMLSACFGVLATMLASLGL
                     YGVMAFVVARRTKEIGLRMALGAPQGTVVWMVLRETLVLLAAGLAAGIPASFALSRYV
                     SAQLYGVRPGDIGAAAVALAILVAAAAGAGFLPARKASSIDPITALRYE"
BASE COUNT          336 a          640 c          543 g          285 t
ORIGIN      
        1 gtccccgtca ggctgcaatc ggggatgccg agtgcgagca gcttccgccg gtccaccagg
       61 atggacggcc cgagaggggc cagaacccgg ctgcactccc ccggctgtaa agtgcggaac
      121 gcagccatcg gaaacagaga cggcttccag gcccggaagt atggctgggc cgagaccgcg
      181 aaggtttcag cggccgtcag ctccggcaga tcgatcgccg gaccctcgtg ccagagtatc
      241 cagcgcgcgt cgctcgaccg cgccagtttc tcgagcccct tcgcgtccca gtgcgtcccc
      301 ttctgctcga atcggtcgat tccgctcccg gtggatggct ccacttcgac cggcagcggc
      361 tcgctcccgt gcatccgcgg gaagatgcgg cagtgcggat accctagcca gcccagcagg
      421 atacccagga tatacaggac ccggagtccc accgcgtgcg aggcgtcgcg cacccgctct
      481 ccggtcttca cgcgcgaagc gtgcagccat tctcggagcc cgttccaacc ctgcgccgcg
      541 ctgtcgtgcg ccacccggcc gcagtgtgcc aggatgcgga ccggagttcc ctggaagaaa
      601 tccccgttgc gattctgcag cagggtccga aacggcggga tcaggaacgg agccagcttc
      661 acaggcaatt tgccgtgctc tccggtccag gagcctacac tgagcgctac ccagtgcggc
      721 caaagcatcc gttccgcgcg aaggaacagc gtcaacgagc ccgggtggat ctcgacccgc
      781 tcgcaaagaa cggccgtttc aggatcgggt tccaccgtgg tgaacaacca gatgggtacc
      841 cccggagccc cctcgcgcaa gtgtgcgacg gcccgggtac acgaaaggcg cgtgagcccg
      901 aagacgacgg ccactctccg gtcacccttt ccggcgagcc tcaacaggga gcgtagattc
      961 gtgccaatcc cctttgggat ctagggtatc acgacgtgtc attcgtaccg cagagcggta
     1021 atcgggtcga tgctgctggc cttccgtgcg ggcaggaaac cggccccggc ggccgccgcc
     1081 accaggatcg ccagggccac ggcagcagcc ccgatatctc ccggcctgac cccgtagagc
     1141 tgagcggaaa cgtagcggct cagcgcgaac gatgccggga tcccggcagc cagtcccgcc
     1201 gcgagcagta ccagcgtttc ccgcagaacc atccacacga ccgttccctg cggcgcgccc
     1261 agggccatcc gcaggccgat ttccttggtc ctcctggcca ccacgaaagc catgacgcca
     1321 tacaggccca gagacgcaag catcgtggcc aggactccga aacaggccga cagcatcgcg
     1381 accagcctct ccgtgcccag cgtttcgtcg agctggcggt cgagcgtttt catgtcgtaa
     1441 accggcagcg cggcgtccag ttcccgtacc ttctcccgca gcgcagagaa catggacttc
     1501 ggatcgaccg acgtccgcac gtaaaaggag actcccgccg ggaaattcga ctgcgcctgc
     1561 gcaacgaaca cctgccggtg gacgccttcc cgcggaccct cgtacagcgc gtcttccacc
     1621 aggccgataa tctcgatatc cagtttggat ttcggcccgt cgccgaaccc gatgtgcctg
     1681 ccgatcggac tctggccccc gaagaagtga gtcgcgaact tgcgattcac gatcgccacc
     1741 gacattctct tgccttcgtc gcgcgcgtcg aaatcgcgcc cctccagaag gggaatgccc
     1801 atcg
//
LOCUS       DASRPQ010001499         2539 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2360327, whole genome shotgun sequence.
ACCESSION   DASRPQ010001499 DASRPQ010000000
VERSION     DASRPQ010001499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2539
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2360327"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="VFD73_17090"
     CDS             <1..440
                     /locus_tag="VFD73_17090"
                     /inference="COORDINATES: protein motif:HMM:NF013038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alanine racemase C-terminal domain-containing
                     protein"
                     /protein_id="HZI75698.1"
                     /translation="FLYGGEAGARPPRPVAALRGQVVALRSIQTSDPVGYNATWRAQR
                     PMLIATISVGYADGLPRSGAQPISDQSRQLELGGRLVPIVGRVTMDMCMVAVDGHVAV
                     GETATVYGGLISIDQQAAMAGTVSYELLTRLGSRVSRCYQGLE"
     gene            437..685
                     /locus_tag="VFD73_17095"
     CDS             437..685
                     /locus_tag="VFD73_17095"
                     /inference="COORDINATES: protein motif:HMM:NF020473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1844 domain-containing protein"
                     /protein_id="HZI75699.1"
                     /translation="MNPHFASLVLGLAHQAEAAMTGNLPPGAEAIGDARKVAQTFIDT
                     LGMLVEKTAGHLDDDEKQLLEQAVTTLRFRYVQTMPKA"
     gene            685..1851
                     /locus_tag="VFD73_17100"
     CDS             685..1851
                     /locus_tag="VFD73_17100"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008973 - phosphopentomutase activity
                     [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA];
                     GO_process: GO:0043094 - cellular metabolic compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HZI75700.1"
                     /translation="MRRAAIIVLDGLGIGPAHDTSRYGDSGSNTLGNVAEAVGGLNLP
                     RLEAAGLGRCAPLRGVSAEVSPEGAWGVCEPASPGKDSTTGHWELCGVILQRPFPTYP
                     NGFPLELLTEFAERTGRGVLANKPASGTAILDEYGAEHCRTGKWIVYTSADSVFQVAA
                     HQEIVSLKELYRACELARGILTGEDAVSRVIARPFAGEPGAWRRTPERKDFSLPPPAP
                     TLLDHLSAAGIDRVGIGKVDDLFAGRGISSTHTPTNADAYALISRALSTLTSGFILAN
                     VIEFDQTWGHRNDVPGFYGGLQELDRALPQMLRKVREQDLVIFTADHGNDPTTPSTDH
                     SREVVPLLVLGPRVRPVDVGRRTTFADVGQTVAEFFEVPALAAGTSFLSEVWRD"
     gene            1844..2230
                     /locus_tag="VFD73_17105"
     CDS             1844..2230
                     /locus_tag="VFD73_17105"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: protein motif:HMM:NF004064.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004126 - cytidine deaminase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009972 - cytidine deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HZI75701.1"
                     /translation="MTDALIAAARAAQARAYAPYSNFRVGAALESESGDVFTGCNVEN
                     ASYGLTICAERAAVFAAVQAGARRFRRAVVVSDTDPPAAPCGACRQVLAEFGLDLRID
                     GVGSRNTVHWRLSELLPSPFGPEQLR"
BASE COUNT          413 a          795 c          840 g          491 t
ORIGIN      
        1 tctttctgta tggcggggag gccggcgcgc ggccgccccg gcccgtcgcc gcactgcggg
       61 ggcaggtggt tgcgctgcga tcgattcaaa ccagtgaccc ggtcggctac aatgcgacgt
      121 ggcgagccca gcggccaatg ctgatcgcca ccatctccgt gggatacgcc gacggtctcc
      181 cccgctcagg ggcccaaccg atttccgatc agtcgcgtca gctggagctg ggaggacgct
      241 tggttcctat tgttggccga gtgacgatgg acatgtgcat ggtagcggtt gacggacacg
      301 ttgctgtcgg ggagaccgcc acggtctatg gcggtctgat ctcgatcgat cagcaagcgg
      361 ccatggccgg caccgtctcc tacgagctgc tcactcgcct cggcagcaga gtcagccgat
      421 gctatcaggg gttggaatga atccgcactt tgcctcgctc gtcctgggat tggcccacca
      481 agccgaagcg gccatgactg gcaatctgcc tcccggcgca gaagcgatag gagacgcgcg
      541 gaaggtagcc cagacgttca tcgacaccct cggtatgctg gtggagaaaa cggccggcca
      601 tcttgacgac gatgagaagc agttgctgga gcaggcggtc accactctgc ggttccgcta
      661 tgtccaaacg atgccgaagg cgtgatgcgc cgcgctgcca tcatcgtcct ggatggtctc
      721 ggcattggtc ctgcacacga tacctctcgc tacggtgata gtggcagcaa caccctcggc
      781 aacgtggccg aggctgtcgg cggtctgaac cttcctcggc tcgaggctgc cggtctgggc
      841 cgctgtgctc cactgcgggg tgtctcggcc gaagtgagtc cggagggagc ctggggcgtg
      901 tgtgagcccg ccagtcccgg caaggacagc acgacagggc actgggagct gtgtggggtc
      961 attctccagc ggcctttccc cacctatccg aatgggtttc cgctggagct gctcaccgag
     1021 ttcgccgaac gtaccggacg cggtgtgctg gccaacaaac cggcatcggg caccgccatt
     1081 ctggacgagt acggggcgga gcattgccgg accggcaagt ggatcgtgta cacctcagcc
     1141 gacagcgtgt ttcaagtcgc tgctcaccag gagatcgtat ccctgaagga gctgtaccgc
     1201 gcctgcgagc tggctcgagg cattctgaca ggcgaggatg cggtttcccg ggtgattgcg
     1261 cgaccgtttg ccggtgagcc cggcgcctgg cggcgcactc cggaacgcaa ggatttcagt
     1321 ctgccgccgc cggcgcccac actgctcgac cacttatccg ctgccgggat cgatcgggtg
     1381 ggcatcggaa aagtcgacga cttgtttgcc ggtagaggca tcagcagtac ccacacgccg
     1441 accaacgccg atgcctatgc gctgatctcc cgcgcactgt ccacgctcac cagtggattc
     1501 attctcgcca acgtcatcga attcgatcag acctggggac atcgcaacga cgtgcccgga
     1561 ttctatggtg gcctccagga gctggaccgt gcgctgccgc agatgctccg gaaggtgaga
     1621 gagcaggacc tcgttatctt taccgcggat catgggaacg atccgacgac tccctcaacc
     1681 gatcattctc gagaggtcgt tcccctgctg gtgctcggcc cccgggtccg gccggtcgat
     1741 gtggggcgcc ggactacgtt cgcggatgta ggacagaccg tggcggagtt cttcgaggtg
     1801 ccggctctgg cagccgggac ctcgttcctt tccgaggtgt ggcgtgactg atgccctgat
     1861 cgcagcggcg cgggcggcgc aggctcgggc ctacgctccg tattcgaact tccgggtggg
     1921 tgccgctctc gaaagcgaga gcggcgacgt gttcaccggc tgcaatgtcg aaaatgcctc
     1981 atacggactc accatctgcg cggagcgcgc ggcggtgttc gcggcagtcc aggcaggagc
     2041 ccgccgcttt cgtcgggccg tggtggtgtc cgacaccgat ccgcccgccg ccccgtgcgg
     2101 cgcctgtcgt caggtgctgg ctgaattcgg cctcgacctc aggatcgacg gtgtagggtc
     2161 ccggaacaca gtgcattggc gcttatccga actcttgccc tcgccctttg ggccggagca
     2221 actccggtga gagtgcccct gtggatcggg gcctttgtcc ttggaatcgc ggcgtgtcag
     2281 gagaagctca ccgccccggg agattgtcct gcattgtgcc ccggcggcgt gcctcaagtt
     2341 tttgaggagg tgcttgaacc tatcgcgggt tctgacagta gcttccgggg ttacgttcaa
     2401 ccgagtgctg cggccgcgat gctggtctcc aatggaggca tagagcagcg ggccatcatg
     2461 cggtttcccc gccgcagcga ttcggtcggc gtgcgcgaca cgctgcgagc ctatgccatc
     2521 gactcggttg gcctggcct
//
LOCUS       DASRPQ010001500         1981 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3643914, whole genome shotgun sequence.
ACCESSION   DASRPQ010001500 DASRPQ010000000
VERSION     DASRPQ010001500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1981
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3643914"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            111..482
                     /locus_tag="VFD73_17110"
     CDS             111..482
                     /locus_tag="VFD73_17110"
                     /inference="COORDINATES: protein motif:HMM:NF014090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005384 - manganese ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030026 - intracellular manganese ion
                     homeostasis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HZI75702.1"
                     /translation="MTPELARQVAEQLMAKEALGAHARDELGISEITTARPVQAALTS
                     AATFAVGAALPLLMVLIVPMTVIVPAVSGASLGFLALLGAIGARAGGANVLRATARVT
                     FWGAFAMALTAGIGAIFGKVV"
     gene            complement(625..1446)
                     /locus_tag="VFD73_17115"
     CDS             complement(625..1446)
                     /locus_tag="VFD73_17115"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI75703.1"
                     /translation="MVCAAQRTAATPPLVGADPAPRWTLRRLVGWVRERFGLRCCRET
                     IRAALHRRKLSWKKAKKLLGRADPEQRQAFVEQLRDVLAGAQRDRHRVVFLDEAHIHQ
                     DADLGYGWAERGQRLWVASRSPGLSARVSFYGLYLYNEGQVRLWPYRRANGEHTIDVL
                     RRLRAAFPSEALIVLWDGAPYHRAKAVREAARALDITLMPLPGYSPDLMPVEELWHWL
                     REDVTYHPCHASADDLTRRVGDFEARLNQEPFVIADRLWVKDQLDPEEEKLRFSK"
BASE COUNT          337 a          643 c          656 g          345 t
ORIGIN      
        1 aagtcgtgac cgagcgctgc cgcatcctca ctcgcgatca gctcaaaccc gggacaaact
       61 tctactagtg gcccaagcca gctgttccgg cctaatcagc cggagttcgt atcacaccag
      121 agcttgcccg gcaggtggcc gagcagttga tggcaaagga agccctcggc gcccacgcac
      181 gcgatgagct tgggatttcg gagatcacaa ccgcgcgccc cgtccaggcg gccctgacct
      241 ccgcggcgac ctttgcggtg ggtgcggctt tgccgttgct gatggtcctc atcgtgccga
      301 tgactgtgat cgtcccggct gtttctgggg cctccttggg cttcctggcc ttgctcgggg
      361 cgattggcgc ccgcgctgga ggcgcgaatg tcttgagagc caccgcgcgt gtgaccttct
      421 ggggggcatt tgcgatggcg ctcacggcgg gcattggcgc catctttggg aaggtcgtgt
      481 gacccgtccc acacgcggca ttgtcgcgga gcctgctcgt cttcgttgcc accaccacga
      541 tgaaaagccg agggcctaaa aatggcagat taagtcgtga acggccttgc cggtgtgctg
      601 gcgccgtttg ctgttaaacc acgtctactt tgagaagcgc agtttctcct cctcggggtc
      661 gagttggtcc ttcacccaga ggcggtcggc gatgacgaag ggctcttggt tcaggcgcgc
      721 ctcgaaatcc cccacccgcc gggtgaggtc gtctgcgctg gcatggcaag ggtgatacgt
      781 gacgtcctcg cgcagccagt gccagagctc ttccacgggc atcagatcag ggctgtagcc
      841 cggcagcggc atcagggtga tgtccagggc tctcgcggcc tcccggacgg ccttggcccg
      901 gtgatagggt gcgccgtccc agagcacgat cagcgcctcg ctggggaacg cggcccgcag
      961 ccggcggagc acatcgatcg tgtgttcgcc gttggcgcgc cgatagggcc acagccgcac
     1021 ctggccctca ttgtagagat aaagcccata gaaggagacc cgcgcggaca ggcccggcga
     1081 gcgtgaggca acccagagac gctgcccgcg ctcggcccag ccatagccga ggtccgcgtc
     1141 ctgatggatg tgcgcctcgt cgagaaagac cacgcgatgc cgatcgcgtt gagcgccggc
     1201 cagaacatcc cggagctgct cgacaaaggc ctgccgctgc tccgggtcgg cccggcccag
     1261 caacttcttg gctttcttcc acgacagctt gcggcggtgc agagcagctc ggatcgtctc
     1321 gcggcagcac ctcagcccga agcgctcgcg cacccagccg accagccggc gcaaggtcca
     1381 gcgtggggct ggatccgccc cgacgagggg cggcgtcgcg gccgtgcgct gggcggcgca
     1441 gaccacctcg ccgagctcgg cttcgtggcg cgggcaaaaa ggggacggcg accgcccgtg
     1501 cggcggaaca cgagcgcgtc ggggccgccc tggttatagg cgtgcaccca atccatcacg
     1561 gtgtgcgccc gccggcccgt acgcacggcg acctgcgtgg cgcagcggtg ctgagtgatg
     1621 tcaaacaaag ccagcgcccg ctcgcgggtg cgggcgtgag gtgcgctcag agccaagtgc
     1681 cgcaagtcct ccggcgtctg accccagcgc gcgcaatcaa cacgtaacac caaatctgat
     1741 cccctccgat gaagggtgat cagatgggga tccgcccggc ccatccaacc cagcggaaaa
     1801 tgccgctctc aaaccagacg tggtttaaag ggcacctcga aaaatttgat cttttccgag
     1861 cgcgcgattt ggatggaggg gcggcctgct ggctttgtag tgggggacaa gaatgggtca
     1921 gcccggtttc ttcgatctct gcgagcgcta tcgtggtctt gatgccaaga aggacccgct
     1981 g
//
LOCUS       DASRPQ010001501         3075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4239780, whole genome shotgun sequence.
ACCESSION   DASRPQ010001501 DASRPQ010000000
VERSION     DASRPQ010001501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3075
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4239780"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..385
                     /locus_tag="VFD73_17120"
     CDS             <1..385
                     /locus_tag="VFD73_17120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75704.1"
                     /translation="AGLKHPARTRIARQPADSHLTSEPVYRAAFSALAGEFLGELLSS
                     LSDSEVLRMVPPKGCMALANLSSVIFVAMITTAEWPGSSGRWGRSHRAAGRRGSSRDA
                     TVPRTVARPLIGRGFVHAANATEFS"
     gene            complement(428..1003)
                     /locus_tag="VFD73_17125"
     CDS             complement(428..1003)
                     /locus_tag="VFD73_17125"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HZI75705.1"
                     /translation="MTAPIDANRPQLAPGDGRPPPAAPPGIGRDLRGQYCGFASRFVA
                     FLFDCVLSIGVFMIVLAAASFAASVLTGTSIHWSRANLWVVIAFFGWQFFYYAYSWTA
                     SGKTPGMVLLGVQVVGLDGGQPGPRRGVIRTLAFPLSFILLGLGFVGVLFQRDRRALH
                     DLIAGTAVIYAWDAREARLRSLAREGSDRRA"
     gene            complement(1000..1518)
                     /locus_tag="VFD73_17130"
     CDS             complement(1000..1518)
                     /locus_tag="VFD73_17130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75706.1"
                     /translation="MRRSAGRRFTGQMESIAQAVAERVIDLVVEALDIDALIARIDLN
                     VVLARIELNSLLVRMDLNEVLNQVDLNQVLERVDLNLVLDRVDMNKLLAQVDVNQIVG
                     RVDIEALVRNTDLGAIMVSSSSNLATEVIDMGRGHAVSMDDTLARWASKLRRNHTRRS
                     GSPELPNAEEES"
     gene            complement(2183..2665)
                     /locus_tag="VFD73_17135"
     CDS             complement(2183..2665)
                     /locus_tag="VFD73_17135"
                     /inference="COORDINATES: protein motif:HMM:NF013950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="G1 family glutamic endopeptidase"
                     /protein_id="HZI75707.1"
                     /translation="MGTGVGNGSLSAAGWKNGKKPDSNYYAWWEAVPDKPVFISDKKV
                     AAGDILRASVTAHLGGLRGYTLTLTNTSKARHWTFTQEIGPVLVPPYLPESAEVVLES
                     STHHLAPGLPAIKFSDISVNSKSMNKPDPAVIVQSEHPNYWGYVSRFSNNSFTAYPGK
                     "
BASE COUNT          573 a          970 c          970 g          562 t
ORIGIN      
        1 ggccgggctg aaacatccgg cgcggacacg gatcgcaaga cagccggcgg actcgcacct
       61 gacgagtgag ccggtgtacc gagcggcttt ctcagctctg gccggtgagt tcctcggcga
      121 gctcctttca tcgctttcgg acagcgaggt cttgaggatg gtgccgccga aaggctgcat
      181 ggcgcttgcg aacttgtcct cggtgatctt cgtggccatg atcaccacgg cggagtggcc
      241 cggttcgagc ggtcgctggg ggcgcagcca ccgagccgcc ggccgccggg gctcctcccg
      301 ggatgccacc gttcccagaa ctgttgcgcg gccccttatc ggtcggggct tcgtccatgc
      361 agccaacgct acggagttct cctgaaaggg agatcatccc gttaggctga ctgaacgcgc
      421 cgccggctta cgctcgccgg tcgctaccct cgcgtgcgag ggaccgaagt cgcgcctccc
      481 gcgcgtccca agcgtagata acggcagtgc cggcgatgag gtcgtgcagc gcgcgacgat
      541 cacgctggaa caggacgccg acgaacccta gccccagcag gatgaagctc agcggaaacg
      601 ctagcgttcg tatgaccccg cgccgggggc ctggctgacc gccgtccagg ccgactactt
      661 gcacgccgag cagcaccatg ccgggcgtct tcccgctcgc cgtccagcta taggcgtagt
      721 aaaagaattg ccagccgaag aaggcgatca ctacccacag attggcgcgg ctccagtgga
      781 tggaggtgcc ggtcagcaca ctggcggcga acgaggctgc cgccagaacg atcatgaaca
      841 ccccgatgct caggacgcag tcgaacagga acgcgacgaa acgcgaggcg aacccgcagt
      901 actggccccg caagtctcgc ccgatcccgg gcggcgctgc tggtggaggc ctgccatcgc
      961 caggcgccag ttggggccgg ttggcgtcga taggcgcggt catgactctt cctcggcgtt
     1021 cggcaactcg ggcgacccgg atcgtctcgt atggttacgc cggagcttgc tcgcccagcg
     1081 cgcgagggtg tcatccatgc ttaccgcgtg gcctcggccc atgtcgatga cctcggtggc
     1141 gagattactg gaggaactga ccatgatggc gccgagatca gtgttcctga ccagcgcctc
     1201 aatatcgacg cggccgacga tctggttgac gtcgacctgg gccaggagct tattcatatc
     1261 cacccggtcg agcaccaggt tgagatctac tcgctcgagc acctggttga ggtcaacctg
     1321 gttgagtacc tcgttcaggt ccatccgaac aagcaagctg ttcagctcta ttcgcgccag
     1381 cacgacattc aggtcaatcc gggcgatgag cgcgtcaata tccagcgcct cgaccaccag
     1441 atcgatcact cgttccgcaa ccgcctgcgc gatcgactcc atttgcccgg tgaaccgcct
     1501 gccagccgag cgcctcaccc agttacccgg atccacacca gtcagtatgg cgaacgctca
     1561 cctgctccat ctcctccgta ccgggtgaca tgggggcagc ttcatgttct ctacggtcgg
     1621 gtgctggttc gatccgttcg cgtaaccacg aaggaaccag catgcgacac cggctcatcc
     1681 cggcggcgct ggccgccgga gcctcgctcg ccctgctggc cggccccggc cacggcggca
     1741 actcgctccg gtgtccatcg cggtcctgac ggcatacctc gccgtctcgg gctctggcgc
     1801 actcatgccc tggcgcgaaa gggaagcaat cgcaggctcc cgtgccgcgg cgatgagcgg
     1861 gacagccccc cataaatgat caaaagcccg ggtagacggc aagccgccgg acatcgcggc
     1921 gtacgtatct gcttggcaag atcgcacctg gtccgtcgtc ttggcaaaga cgaccggctg
     1981 gggctcgaaa cccacgaccg gcggatcatg ggaagcgcgg ccaggggtga gtgggtacag
     2041 tcagcttaag atcacctcgg tgcgctggag cgcgacgctc tgcccgggga gcgccccttc
     2101 ccccgcgatc aagagcagca ccgtccgagc aggaaaacta tgacaaatcc cgtcgaccaa
     2161 gcggggcacc gttcgggtct attcatttgc cagggtacgc ggtaaagctg ttgttactga
     2221 atcggctcac gtaaccccag tagttaggat gctcggactg cacgataact gcagggtctg
     2281 gcttgttcat agacttgctg ttgacgctga tgtcgctgaa tttgattgcc ggaaggccgg
     2341 gggccaggtg gtgggttgac gactccagga caacttcagc agactcgggg aggtatggcg
     2401 gaactagaac cgggccgatc tcctgggtaa aagtccagtg cctggccttg ctggtgttgg
     2461 tcagtgtcag cgtataccca cgaaggccac cgaggtgcgc cgtgacagag gcgcggagga
     2521 tgtcaccagc cgcaaccttc ttatccgaga tgaacaccgg cttgtcgggt actgcctccc
     2581 accaagcgta gtagttgcta tctggtttct tgccattttt ccagccagcg gccgagagac
     2641 tgccgttgcc gacaccggtt ccgatctggc ggttagctgg acgttaaccg tgatggtgta
     2701 tacgccggga gccgcgtatt tgtggttccc tatgagatgg gggccgacag tcggattggc
     2761 ctgcacgttt gctgaactgc caccgtcgcc ccacgtgacc tcaaaggcaa aggtgcagtg
     2821 agatgtgtct ccgtgggcgt aacttgtgta agcgacggtg gggtctgtac tcacacaggt
     2881 cttgagggag agcacgaagt tgcacggcgc gccggaggcg gcagcgccgt gaggagccac
     2941 gatgctcatc tcccccaggc tagaagctga gccagcatgg gccggggata caatacgcat
     3001 accggcggtt atcgtcaaga ctacgattgc cagcaggcct cttgaccgaa cgaagcgctt
     3061 ctccattggt ccccc
//
LOCUS       DASRPQ010001502         2652 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2715444, whole genome shotgun sequence.
ACCESSION   DASRPQ010001502 DASRPQ010000000
VERSION     DASRPQ010001502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2652
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2715444"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            276..953
                     /locus_tag="VFD73_17140"
     CDS             276..953
                     /locus_tag="VFD73_17140"
                     /inference="COORDINATES: protein motif:HMM:NF016852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LicD family protein"
                     /protein_id="HZI75708.1"
                     /translation="MIELLAADLRDLHDVLERTNLDGHYWLWAGLLLGWAREGAILPH
                     DNDADFGVTDADFHRLVSAVPEITKAGFRCDRRFVNNDGVVTQLVFIRHGARFDFFRM
                     FPEAGRLRFFAYSAGKDGAVQLEQSVPEQATVPFTFLDRTWLKHQDHYLELRTMYGAW
                     QIPDPSWSYLEGAAIEARHPWRVPEYKWRGGAAALTGDMPRQVPGGEGGGHQVPSLPD
                     SRPGNSH"
     gene            complement(1057..2205)
                     /locus_tag="VFD73_17145"
     CDS             complement(1057..2205)
                     /locus_tag="VFD73_17145"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI75709.1"
                     /translation="MTVTDSDRQAAEESGGESRVQDIRWANGTVRVTTPVPTRVWTAV
                     AAADPSTMPFHTPAWRECVSSGSGWRDASRLYELPGERQLVLMMARRPGRLVQASWPE
                     GWGAGGVLAPGGVRPDEMALVCADLAKSRSLNTTVRPGFVAAPAWPSVSGGFSSVPRA
                     VHVAHLGQSFEDFWSRSVSARTRSNNRAAWRSLEQAGVVISRGNSPKLVREFYQVYLQ
                     WIAWRARQRKMPTALARWRARQAEPFQKFATVASRLGADCQIWVARWDGRPVGTAINL
                     YAGESAVGWRSFTDRSVPSRFRLPEVLIVEGIRHACESGCRYIDLGQSVDNARLASIK
                     ERLGGQEHAFAEYCFGRLPLSTGQRAVERLRRRVEERVVSRSNQHDHR"
BASE COUNT          451 a          905 c          815 g          481 t
ORIGIN      
        1 cgttgcccca gtggcccggt cgacacacca aacgtagacc tgaagagtcg atggtcctga
       61 aggaatacga tggtcgcatt ctcgatggcg ctaggctgcc attttatccg ggtccgcgag
      121 gcgaggagcg tcacctgccc cgccggggct tcttattgca ggctctatgg tgttgacatg
      181 gggcagtgat gagcacaaca ctatctgaga cacgctgcct gatagaagtg cgccttgcct
      241 tttatgctcg gcgcatccca gcgctgcgac gtcgcatgat cgaacttctc gccgcggacc
      301 tgcgcgatct ccacgatgtc ctcgagcgca ccaatctcga tggccactac tggctatggg
      361 caggtctact gctgggctgg gctcgcgaag gagccattct gcctcacgac aacgatgcag
      421 acttcggagt gaccgacgct gacttccacc ggctggtgag cgccgtgccg gagattacta
      481 aggcaggctt cagatgtgat cggcgcttcg tgaacaacga cggggtcgtc acccaactgg
      541 tattcattcg ccatggtgcc cgtttcgact tcttccggat gttccccgaa gctggccgac
      601 ttcgcttctt cgcgtatagc gccgggaagg acggagcggt tcagctcgag cagtccgtgc
      661 cggagcaggc gacggtcccg ttcacctttc tggaccgtac ctggctcaag caccaagacc
      721 attatctgga gcttcggacc atgtacggtg cctggcagat cccagatcct tcgtggtctt
      781 accttgaagg ggccgctatt gaagcacgtc acccctggcg tgtccccgag tacaagtggc
      841 gaggcggagc agccgccctc actggtgaca tgcctcgcca ggtccctggt ggggaaggtg
      901 gcggccacca ggtgccgagt ctgccggaca gccgaccggg taactctcat tagtcagggc
      961 agctgactct caatgcccgt tggatccgcg tccgctgcgt gaaaccgcgg tccaaaccga
     1021 ctcagcgcct tcccgctcct gccggggaga gatcacctac cggtgatcat gctgattgct
     1081 gcgcgacacg acccgttctt ccacgcggcg ccggagtcgc tcgacagccc tctggcctgt
     1141 cgacaggggc agccgcccga agcagtattc ggcaaaggca tgttcctgcc cacccaggcg
     1201 ttccttaata cttgctagcc gggcgttgtc tacggattgc cccagatcga tgtagcggca
     1261 tcctgactcg caggcatgcc ggatgccctc gacgatcagt acttcgggaa gccggaagcg
     1321 gctcgggacc gatcggtcgg tgaaggagcg ccagccgacg gcagactcgc cggcatagag
     1381 gttaatggcc gtgccaacag gccgtccgtc ccagcgggcc acccagatct gacagtccgc
     1441 gccaagtctg ctggccacgg tagcgaactt ctggaatggc tccgcctggc gcgcccgcca
     1501 tctggccagc gcggtcggca ttttccgctg ccgggcccgc caggcgatcc attgcaggta
     1561 aacctggtag aactcccgca ccagtttcgg ggaattgccg cgggagatga cgaccccggc
     1621 ttgctcgaga ctacgccagg cggcccgatt gttgctccgc gtccgggccg agaccgaacg
     1681 actccagaaa tcctcgaagg actgccccag atgcgcgaca tggaccgccc gcggaaccga
     1741 agaaaagcca ccgctgaccg acggccaggc cggagcggcc acgaatccgg ggcggaccgt
     1801 ggtattgagc gacctgctct tcgcaagatc ggcgcacacc agtgccatct catcgggtct
     1861 aacgccacca ggggccagca cacctcctgc tccccagcct tcgggccacg aagcctgcac
     1921 caaccgcccc ggccggcgtg ccatcatcag caccagttga cgctcgcccg gcagctcata
     1981 cagccggcta gcatcccgcc acccgctgcc cgagctgacg cactctcgcc aggctggagt
     2041 atggaacggc atggtggaag ggtctgctgc agccaccgcc gtccataccc ttgtcggtac
     2101 cggggtcgtt acccgcactg tcccattggc ccaccggata tcctggaccc gtgactcgcc
     2161 gccggactcc tctgcggcct gccgatcgct gtccgttacc gtcattgcca aggcccctcc
     2221 aaccctttgg ctaacgtgat cttgctggtg cctggctacc gcacactgtg gttccgatag
     2281 ggcgggaaac caggtgcgcg agtcgactca ggttcgctgg cggctgcgat gatgtgatct
     2341 tgcgacgctg tcgggtcact acctgcgaca agacccgggg tctggcgtgc ccgtagggat
     2401 gtctggggat aacgcggcga cgcagacgac gcattccggc cggatcctct ttctgcctct
     2461 cctgcctccc gggcccgacc gcgctgatcc cggtcctggg cgggcgcggc agggcggggg
     2521 taccgctgcg gcggcatcct gccgggcggc ggggcagcac cgcccatcgg ccgctggtca
     2581 cgcacgccgg ccgcaccagc ctgccgggtc atctcgccac tccgccgctg ccccgctccc
     2641 gggccagtgc cc
//
LOCUS       DASRPQ010001503         1731 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2361171, whole genome shotgun sequence.
ACCESSION   DASRPQ010001503 DASRPQ010000000
VERSION     DASRPQ010001503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2361171"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1402
                     /locus_tag="VFD73_17150"
     CDS             <1..1402
                     /locus_tag="VFD73_17150"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HZI75710.1"
                     /translation="GTAYHPSGKIFIQLLQGELLALDAKTGKELWKAKNADYKQGSTM
                     TNAPIVIKDLVIAGISGGEFGVRGRVTAYNVNDGKEVWRGYSTGPDSEVLISGDANPN
                     YPSHKGKDLGVSTWQGDEWKRGGGTTWGWYSYDPELNLFYYSTGNPGTWNPDQRPGDN
                     KWSMTIFARNPDNGQVKWAYQMTPHDEWDYDGVNENVLFESGGKKLLAHFDRNGFGYT
                     LDRTNGKVLVAQPYGPVNWAKRVDLTTGVPEKDPKYGTTAKKNTEGICPAAIGFKDQQ
                     PSAYSPMTGLFYVPANHICMDYEGVEVKYTAGQPYVGAIVRMFPGPGGHRGNFIAWDP
                     MKGKAVWQNKENLAAYGGALTTAGGLVFYGTMEGWLKALDQKTGKTLWQYKTPSGIIG
                     NPMTYNGPDGQQYVAVLSGIGGWAGIGVAAGIGAEDPTAGLGALGAFGDAGNFSTQGG
                     VLTVFALKNPWPAGKM"
BASE COUNT          333 a          555 c          554 g          289 t
ORIGIN      
        1 gggcaccgcc tatcacccca gcggcaagat cttcatccag ctgctgcagg gtgagctgct
       61 cgcgctcgat gccaagaccg gcaaagagct gtggaaggcc aagaatgccg actacaagca
      121 gggcagcacc atgaccaacg cccccatcgt gatcaaggac ctcgtcattg ccggtatttc
      181 gggcggtgag ttcggcgtcc gcggtcgggt gacggcgtac aacgtgaacg acgggaaaga
      241 ggtctggcgc gggtacagca ccggcccgga cagcgaagtc ctgatctcgg gcgatgccaa
      301 tcccaattat ccgtcccaca agggcaagga tctcggcgtc tccacttggc agggcgatga
      361 gtggaagcgg ggcggcggca ccacttgggg ctggtactcc tacgatcccg agctgaacct
      421 cttctattac agcaccggca acccgggcac ctggaacccc gatcagcgtc ccggcgacaa
      481 caagtggtcg atgaccatct tcgcccgcaa cccggacaac gggcaggtga agtgggccta
      541 tcagatgacc ccccacgatg agtgggacta cgatggtgtc aacgagaacg tgctgttcga
      601 gagcggcggc aagaagctgc tggcgcactt cgaccggaac gggttcggct acaccctcga
      661 tcgcaccaac ggtaaggtcc tggtggcgca gccctatggt ccggtcaact gggccaagcg
      721 ggtcgacctg accaccggcg taccggagaa ggatcccaag tacggcacca ccgcgaagaa
      781 gaacaccgag ggcatctgcc ccgcggcgat cggcttcaag gatcagcagc cgtctgccta
      841 ctccccgatg accggtctct tctatgtccc ggcgaaccat atctgcatgg actatgaagg
      901 ggtcgaggtg aagtacaccg ccggtcagcc ctacgtcggc gcgatcgtgc ggatgttccc
      961 cggcccgggc ggccaccgcg gtaatttcat cgcctgggat ccgatgaagg gcaaggcggt
     1021 atggcagaac aaggagaacc tcgcggcgta cggcggggcg ctcaccacgg cgggcggcct
     1081 ggtcttctac ggcaccatgg aaggctggct caaggctctt gaccagaaga ccggcaagac
     1141 cctgtggcag tacaagaccc cgtccggcat catcggcaac ccgatgacct acaatggtcc
     1201 cgatggccag cagtatgtgg ccgtgctctc gggcatcggc ggctgggccg gtatcggcgt
     1261 agcagccggc atcggcgccg aagatcccac cgccggactc ggcgcgctgg gtgctttcgg
     1321 tgacgcgggc aacttcagca ctcagggtgg cgttctgacg gtcttcgccc tgaagaaccc
     1381 gtggccggct ggtaagatgt aatgtgcgac tccgagaggg ctggcggttt cccctccagc
     1441 ctttctcggg ggtagattcc agaagtgaga gacggcgccg ggctgctgtt cgctccggcg
     1501 ccgtttcctt tgtggatcac gccggtatgg caccggcgat accccaaccc atgatgggcg
     1561 agccatgctt caggacttcc gatttctcct ccgggccgct tccctggcgg gcctcactat
     1621 agcagcgacc gcggttccgg cccacgccca gcgcccggcg ccgctcacgc ccggactgct
     1681 ccgggtctgt gccgatatgg acaacctccc gttctcgaac cagaaggggg a
//
LOCUS       DASRPQ010001504         1203 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1444915, whole genome shotgun sequence.
ACCESSION   DASRPQ010001504 DASRPQ010000000
VERSION     DASRPQ010001504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1444915"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..181
                     /locus_tag="VFD73_17155"
     CDS             <1..181
                     /locus_tag="VFD73_17155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75711.1"
                     /translation="PVLALPSSMRVATVTAYTERFRRRLGNPPFDGAAGVPELAERLA
                     QFNADALPDLESEED"
     gene            270..818
                     /locus_tag="VFD73_17160"
     CDS             270..818
                     /locus_tag="VFD73_17160"
                     /inference="COORDINATES: protein motif:HMM:NF024952.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2'-5' RNA ligase family protein"
                     /protein_id="HZI75712.1"
                     /translation="MLFRDTPAVRATARQAQARLAPFRDFHMTPGEWLHATALVAGTT
                     EDISREDRELMLSGAQQHLGSIQPINVTVSRVLYHPEAIMLGFTPEGALDPIHRAVRL
                     ATLAVTGRTGSVTGPAARWTPHITISYSTGRQPMAPIAVALGREVPGCDLTVRAVSLV
                     IQWGPERLWNWQPVGTASLGAS"
     gene            complement(833..1060)
                     /locus_tag="VFD73_17165"
     CDS             complement(833..1060)
                     /locus_tag="VFD73_17165"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HZI75713.1"
                     /translation="MPVATQVARDIEADIRTGRLAPDTRLPSEIDLSRQYGVARMTVR
                     RAVAQLRDKGLVVTVHGRGSFVAPRDDQAQG"
BASE COUNT          211 a          395 c          387 g          210 t
ORIGIN      
        1 gcccgtgctg gcgcttccct cgagcatgcg ggtcgcgact gtgaccgcct acacggaaag
       61 attccggcgg cgcctcggta atcccccgtt tgatggcgct gcgggagttc ccgagctagc
      121 tgagcggctt gcgcagttta atgcggacgc cctgccggac ctggaatccg aagaagactg
      181 agcctgtgat gccagtacct gacgagacaa gagaccgctg gagtaacaga ccggaaccag
      241 attccggcaa gggcgctatc tactggcaca tgctattccg ggacacgcct gccgtccgcg
      301 ccacggccag gcaggcgcaa gcgcggctgg ctccgttccg cgatttccat atgacccccg
      361 gggaatggct gcacgcaacg gccctcgtcg ccggtaccac ggaggacatt tcccgcgagg
      421 accgggagct gatgctgtcc ggggcgcagc agcacctcgg cagcatccag ccgatcaacg
      481 tcacggtgtc ccgggtcctg tatcacccgg aggcgatcat gctgggcttc acgcccgagg
      541 gtgccctgga tcccatccac cgcgccgtac ggctagccac gctcgcggta acaggccgga
      601 cgggaagcgt taccgggcct gccgcgcggt ggactcccca cataacgatc tcctacagca
      661 cgggcaggca gcccatggca cccatcgccg ttgcgctagg gcgcgaagtt ccgggatgcg
      721 acctgaccgt acgagccgtc agcctggtta ttcagtgggg gcctgagcgg ctctggaatt
      781 ggcagccagt gggcacggcc agcctgggcg cttcgtaagc ccgcggttct ggctatccct
      841 gcgcctgatc atcgcgaggc gcgacgaagg agccgcggcc gtgaaccgtg acgaccagcc
      901 ctttgtcccg cagctgagct acggcgcgac gcacggtcat tctggccacg ccgtactgcc
      961 gggacaggtc tatctcgctt ggcagccgcg tgtccggcgc gagccgcccg gtcctgatgt
     1021 ctgcctcgat gtcccgggcg acctgggtag ctacgggcac ggacgaatcg tgccgtatcc
     1081 ggccagaccg gtcatcgagc gacatgttga tcatggtaga tgacccttga cctgcatgga
     1141 cgcatagcta cgtctagtga ggcacgctag atatctatag acatctagtg atagtctcgc
     1201 tgt
//
LOCUS       DASRPQ010001505         1086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4567989, whole genome shotgun sequence.
ACCESSION   DASRPQ010001505 DASRPQ010000000
VERSION     DASRPQ010001505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4567989"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VFD73_17170"
     CDS             complement(<1..219)
                     /locus_tag="VFD73_17170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75714.1"
                     /translation="MQAFPMPTANTTRSGSCLITQDQLDAAFQEVLPRVGVGRYFNVD
                     ARRFAAQYAAAAREGVTNAIRHGRAGWCE"
     gene            396..>1086
                     /locus_tag="VFD73_17175"
     CDS             396..>1086
                     /locus_tag="VFD73_17175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75715.1"
                     /translation="MSHLTRSRLYRVAGLVVLLAGLSLWSQVSSGSTALAGARPKPKP
                     TPAATATATPAPTATPTPSATPSPTPTPVPVTGTWQAVPSPAIAVSNSTFGARLNAVA
                     VVSATDIWAVGFGPQPGGPAYAKQTLIEHWDGMSWRIVPSPNPPSTYSQVELDSVFAL
                     AANDVWAVGYGENPSGAVSPADITLVEHWDGASWSIMPSPDPDQEVNQLHSIAGVVSN
                     DLWAVGQRGEGG"
BASE COUNT          185 a          379 c          320 g          202 t
ORIGIN      
        1 ctcgcaccac ccagcccgtc catgccggat cgcgttcgtt actccctcgc gcgccgccgc
       61 cgcgtactgc gccgcgaacc gccgcgcgtc tacattgaaa tagcgcccca cgcccactcg
      121 cggcagaacc tcctgaaacg ccgcgtcaag ctggtcctgc gtaatcagac agcttccgga
      181 gcgggtggtg ttagctgtgg gcatgggaaa cgcctgcatc ttgatctgct tcctgtctac
      241 cgctcttcca cccgtccacc gattattgcg tgttgatgaa cgtgtgccct taagagttcc
      301 gtaagaagct ggcaacatac tcaaggatgt cacgaaatgc gtggtggagc gcgcacctgc
      361 gcactactct gattccacga gaggaagtgc attgcatgag ccatcttacg aggagcaggt
      421 tgtaccgggt cgccggcctg gtggtgttgc ttgctggatt gagcctgtgg tctcaggtga
      481 gctccggctc tactgcgctc gccggagcga gacccaaacc caaaccaacc ccggccgcca
      541 cggccaccgc gactcctgcc ccgaccgcga cacccactcc cagcgcgacg cccagtccca
      601 cgcccacacc tgtgcccgtc accggaacct ggcaggccgt ccccagccct gccatcgctg
      661 tgtccaacag tacgtttggc gccaggctca acgcggtcgc ggtcgtctct gccaccgaca
      721 tctgggccgt gggtttcggc ccgcagccag gtggtccggc gtacgccaag cagaccttga
      781 tcgagcattg ggatggcatg agctggcgca tcgtgcccag tccgaatccc ccctcgacct
      841 actcccaggt ggagctggat tcggtctttg cgctggccgc caatgatgtc tgggcggtgg
      901 gctacggcga gaatccctcc ggcgccgtct cgcccgccga tattactctt gtcgagcatt
      961 gggacggcgc cagttggagc atcatgccca gccccgaccc agatcaggag gtgaaccagc
     1021 ttcactcgat agccggcgtc gtcagcaatg acctctgggc cgtcggccag cgcggggagg
     1081 gcggcg
//
LOCUS       DASRPQ010001506         2416 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2361425, whole genome shotgun sequence.
ACCESSION   DASRPQ010001506 DASRPQ010000000
VERSION     DASRPQ010001506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2416
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2361425"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..243)
                     /locus_tag="VFD73_17180"
     CDS             complement(<1..243)
                     /locus_tag="VFD73_17180"
                     /inference="COORDINATES: protein motif:HMM:NF024857.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HZI75716.1"
                     /translation="MRSPHDAERTLTAPETLGLDTRVEIRKAAVKLLEEMPEGEGRLV
                     IDLAGTRHVDSAGLGALMLIQRRAAERRQLVILRNLR"
     regulatory      complement(253..338)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
     gene            579..>2416
                     /gene="acs"
                     /locus_tag="VFD73_17185"
     CDS             579..>2416
                     /gene="acs"
                     /locus_tag="VFD73_17185"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HZI75717.1"
                     /translation="MNDQIDTLLSEQRRFPPPRAFTARANATEILYQAGRDWKHFWEE
                     QARTLDWMAPWNQVLDWRTPHARWFVDGKLNAAANCLDRHLDGPRRNKAALVWEGEPG
                     DRRVLTYWDLAREVRRCANGLKSLGIRRGDRVAIYLPMIPEAVVAMLACARIGAIHSV
                     VFGGFSAESLRDRINDAQAVALITADGGYRRGQVLPLKRFADEALAQCPSIRHCIVVS
                     RVGAEAAPALREGRDHWWNSLLEGASTAGEPEAMDAEDLLFILYTSGTTGKPKGIVHT
                     TGGYLTHVTCTTRYVFDLKEEDVFWCTADIGWVTGHSYVVYGPLANGATVVMYEGAPD
                     WPERDRFWSIAETYGVTVLYTAPTAIRAFMKWGTEHPAKHDLSTLRLLGTVGEPINPE
                     AWIWYHENIGRGRCPIVDTWWQTETGGIMITPLPGVTTTKPGSATIPFPGVSAELVDS
                     NGKRLEKGGGFLTLTQPWPGMLRTIYGDDARYRETYWSRFPGKYFAGDGAKLDDDGYW
                     WILGRVDDVLNVAGHRIGTMEVESALVDHPAVAEAAVVGRAHDLKGQALAAFVTLKEG
                     KHGSPTLKDDLNDHVVKKIGAIARPDDILFSADLPKTRSGKIMRRLL"
BASE COUNT          448 a          770 c          756 g          442 t
ORIGIN      
        1 ccgcaggttc cggagaatta ccagctggcg ccgctccgct gcgcgccgct ggatcagcat
       61 cagggcgccc aggccggcag agtccacgtg gcgggtgccg gcgagatcga tcaccaggcg
      121 tccctcgcct tccggcatct cctccagcag cttgacggcg gctttccgga tctcgactct
      181 ggtgtcgaga cccagcgtct ccggcgcggt cagtgtgcgc tctgcgtcgt gcggcgacct
      241 cattggtcct ccttcggcac cgagctatct caccagggac tccagcgaga cctctagttt
      301 tgcggccccg aatcactccg ggtgtgctct tatcgggcgg atctgcgctt ggccgcatac
      361 gaccgcgcgc cctcgccacg caaaaaggcg agactggtgc caccaacgac aaccaccgga
      421 tttccaatct cttgtgagcc ccataaccaa ctcttgcagc ggtaactcac gccgcactcc
      481 gcggcacact accgcaaaag tagcggatat gcagagctct gctcttacac ggagtcatca
      541 gtcgtcttag cttgatcctg actctcaccc cactgacgat gaacgatcag atcgatactc
      601 tcctctccga gcaacgccgg tttcctcctc ctcgcgcgtt taccgcccgc gcgaacgcga
      661 ctgagatcct ctaccaagcc ggacgcgatt ggaagcactt ctgggaagaa caggctcgca
      721 cactggactg gatggcacca tggaaccagg tgctggactg gcgaacgcct cacgcccgct
      781 ggttcgttga cggcaaactc aacgccgccg ccaactgcct ggatcgccac ttagacggcc
      841 ctcggaggaa caaggcggcg ctggtgtggg aaggtgagcc gggcgatcgg cgggtactca
      901 cctattggga tctggcgcgg gaggtccggc gttgcgccaa cggcctcaag tcgctgggca
      961 ttcggcgggg cgatcgggtg gccatttacc tcccgatgat tcccgaggcg gtagtggcca
     1021 tgttggcgtg cgctcgaata ggcgcgattc actcggtcgt gttcgggggg ttttcggcgg
     1081 agtcgctccg cgaccggatc aacgatgcgc aggcggttgc actcattact gccgacggtg
     1141 gctaccggcg cgggcaggtc ctgccgctca agcggtttgc cgacgaggca ttggcccagt
     1201 gcccctcgat cagacactgc atcgtggtct cacgggtagg ggccgaggcc gctcctgcac
     1261 tgcgggaagg gcgagatcac tggtggaatt cactgctgga aggagcctct accgccggtg
     1321 agccggaagc gatggacgcg gaggatctgc tgttcatcct ttacacctcg ggtaccaccg
     1381 gcaagccgaa aggcatcgtc cacaccaccg gcggctacct cacgcacgtc acctgcacca
     1441 cgcggtatgt cttcgatctc aaggaagaag acgtcttctg gtgcaccgcc gatatcgggt
     1501 gggtaaccgg ccattcgtac gtggtatatg ggccattggc caacggcgcc accgttgtga
     1561 tgtacgaggg agctcctgac tggccggagc gggatcggtt ctggagcatc gccgagacct
     1621 atggcgtcac tgtgctctat accgcaccca cggcgatcag ggcgttcatg aagtggggca
     1681 ccgagcaccc tgcaaagcac gacctgtcga ctctgcgtct cctgggaaca gtgggagagc
     1741 cgatcaaccc cgaggcgtgg atctggtacc acgaaaacat cggccgggga cgttgcccga
     1801 ttgtcgatac ctggtggcag accgagaccg gcggcatcat gatcactccc cttccgggcg
     1861 tcaccacaac caagcccggt tcggccacca ttccgttccc tggcgtctca gccgaattag
     1921 tagacagcaa cggaaagcga ctggagaagg gtggcggctt cctgacgctc acccagccct
     1981 ggcccggcat gctgcggacc atctacggcg atgatgcccg ctaccgtgag acctattgga
     2041 gccgctttcc ggggaagtat ttcgccgggg acggagccaa gctcgacgac gatggctact
     2101 ggtggatact cggccgcgtg gatgacgtcc ttaatgtggc cggccaccgc atcggcacca
     2161 tggaagtgga gagcgcgctg gtagatcacc ctgccgtggc cgaggcggcg gtggttggac
     2221 gggcccatga cctcaagggt caggcgctgg cggccttcgt cacgctgaaa gaggggaagc
     2281 acggctcacc gacgttgaag gacgatctca acgaccacgt cgtcaagaag atcggagcca
     2341 ttgcgcgccc ggacgacatc ctgttttccg ctgatctgcc gaagaccagg agcgggaaga
     2401 tcatgcgtcg cctgct
//
LOCUS       DASRPQ010001507         1215 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_798157, whole genome shotgun sequence.
ACCESSION   DASRPQ010001507 DASRPQ010000000
VERSION     DASRPQ010001507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_798157"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1215)
                     /gene="lanM"
                     /locus_tag="VFD73_17190"
     CDS             complement(<1..>1215)
                     /gene="lanM"
                     /locus_tag="VFD73_17190"
                     /inference="COORDINATES: protein motif:HMM:TIGR03897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009403 - toxin biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0018081 - peptide cross-linking via
                     lanthionine or 3-methyl-lanthionine [Evidence IEA];
                     GO_process: GO:0018193 - peptidyl-amino acid modification
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="type 2 lanthipeptide synthetase LanM"
                     /protein_id="HZI75718.1"
                     /translation="LTLVDCGDHGWSECADVAPCAREEEVVRFYQRQGSYLALLYALD
                     ATDLHNENLLAAGEHPVLVDLEALFHPHVHGKDPALENLAAGALDNSVWQVGLLPRRV
                     WSDENSIGVDMSGLGGQPGQMNPHRLVSWERPGTDEMRLVRRRVQLPVSENRPRLGNQ
                     DVDVVDYRDAVLTGFTGMYRLLCQNKAALLAEQLPRFAHDETRAVIRSTNVYGLLWYE
                     SFHPDLLRDALERDRFFDRLWIEAARRPHLARLIPAEQRDLWRGDIPMFSTSPDSRAI
                     FAAERERFEDFFDAPSLDLVQQRVEHLSDDDLAKQRWIIEASLATVLMDREDRIGRPV
                     HAPSVTQRVARGQLLALANSVGRRLSELSLQNEGGAYWLGVGPLDESTWGLYPSGTDL
                     YAGTSGIALFLG"
BASE COUNT          220 a          399 c          390 g          206 t
ORIGIN      
        1 agcccaggaa gagcgcgatt ccgctggttc cggcgtagag gtcagtgccc gaagggtaca
       61 ggccccaggt ggactcatcc agagggccca cgccgagcca gtacgcgccg ccttcgttct
      121 gcaatgagag ctcgctgaga cgcctcccca cagagttcgc cagggccagc agctgtcctc
      181 gtgccacccg ctgggtcacc gacggagcat gtaccggccg accgatcctg tcctcacgat
      241 ccatgaggac agtggcgagc gacgcttcga tgatccacct ctgcttggcc aggtcgtcat
      301 cactgaggtg ctccactcgc tgctggacca gatcgaggct cggcgcgtcg aagaagtcct
      361 cgaagcgctc cctctcggcg gcgaaaatcg ctcggctgtc cggggaggtg ctgaacatgg
      421 ggatgtcacc gcgccacagg tcccgctgtt ccgccgggat gagccgggca agatgaggac
      481 gccgcgccgc ttctatccag agccgatcga agaagcgatc acgttcgagt gcgtcacgca
      541 gcagatccgg gtggaagctc tcgtaccaga ggaggccgta tacgttcgtc gagcggatta
      601 cggcgcgtgt ctcatcatgg gcgaaccgcg gcagctgctc ggccagcaga gccgccttgt
      661 tctggcagag cagacggtac atcccggtga agccagtgag gacggcgtca cggtagtcca
      721 cgacgtcgac atcctggttg cccagacgcg gccggttctc gctcaccgga agctggacac
      781 gccgccggac cagccgcatc tcatcggtac ctggtctttc ccagctgacg agccgatggg
      841 ggttcatctg gcccggctgc ccgcccaggc cgctcatgtc gacgccgatg gaattttcgt
      901 ctgaccacac gcgccgcggc aacaacccaa cctgccacac ggaattatcc agcgctcccg
      961 ccgcaaggtt ctccaaggcc gggtccttgc catggacatg aggatggaac agggcttcga
     1021 ggtccacgag caccgggtgc tctcccgcgg cgaggaggtt ctcgttgtgc aggtcggtgg
     1081 cgtctagggc gtacagcagc gctagatagc ttccctgacg ttggtagaag cgcacgacct
     1141 cctcctcgcg tgcgcaggga gcgacatcgg cacactcgga ccagccgtgg tccccgcagt
     1201 cgacgagcgt gagtg
//
LOCUS       DASRPQ010001508         1206 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1445997, whole genome shotgun sequence.
ACCESSION   DASRPQ010001508 DASRPQ010000000
VERSION     DASRPQ010001508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1206
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1445997"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(509..1096)
                     /locus_tag="VFD73_17195"
     CDS             complement(509..1096)
                     /locus_tag="VFD73_17195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75719.1"
                     /translation="MASDRMVMMERGEAAMTNSETVGRNPVEEQLSRVHWHILRVDSL
                     RNTVASRAGTLLSTNALVVAGIALAVGSDKHRPSVIVIMATLVTFACVFGSVTSAVLA
                     MVSTFHWGHQFPDQADSAGTIYSFIEGSGARTFEDFKQQRATESAGQILDDALRELWR
                     ISQLHRDRYRWLRRGHRWLFAGLLGLLITVGLAVS"
BASE COUNT          242 a          377 c          386 g          201 t
ORIGIN      
        1 gggggaacct cccagttgct gcgtgcgtgc ggtcgctagc ctcgctggat accccagcac
       61 tacatcgccg gcaccggccg gggtacatca cccgcgaggg gtggacacga ggggaatggc
      121 agtaccgatc gggctgcgag cgcactgttg ggcgccaacg gcagcggcgt gcggacggcg
      181 ggtgaagagc agcgccatca gggcgacgac ggcgagccgg gacacggatg cagcagcgct
      241 gacgtgccac ggttgcctac aggccatccg attctgtagc ccacataacc gtcggccaat
      301 cggccaggag tctgcatata gaggcgggtc gccgcgcgtg cgccaaagca ggattaatca
      361 cggaggataa cgttgagcct ggacgactat gcgaccgtat cgccgaatag gaacacaaga
      421 tgaaaggtta cctatggcgg tacatgccac gcagatcgcc caactccgag cggagtctgg
      481 ccgctaccgg cccgccacgg cgtccggatc agctaacggc gagtcctacc gtgatgagca
      541 gccccaagag cccggcaaac agccaccggt ggccgcggcg aagccaccgg taccggtcac
      601 gatgcaattg gctgattcgc catagctccc gtagtgcatc gtcaaggatc tgcccagcag
      661 actcggtagc ccgttgctgt ttgaaatcct cgaaagtcct ggccccgctg ccttcgatga
      721 agctgtagat ggtcccggcc gagtcagcct gatcggggaa ctggtggccc cagtgaaagg
      781 tggagaccat agcgagaacc gcgctggtga ccgagccgaa gacacaggcg aatgtcacca
      841 gcgtggccat gatcacgatg acgcttggcc gatgcttgtc cgagccgacg gcaagtgcga
      901 tcccggcaac cacgagcgcg ttggtactca gcaaggttcc ggctcgtgac gcgacggtgt
      961 tccggaggct gtccacccgg aggatatgcc agtgcacgcg actgagctgc tcttcgacgg
     1021 gattccggcc gacagtctcc gaattcgtca tcgcggcttc gcctcgctcc atcatgacca
     1081 tccggtcaga tgccaccttg cccatccaag acttatcaga aaggcccgga tcagtccccc
     1141 ctccgcgctg gagtcgcgtt ggcagtcgtt gccgttcttg agggccggag tgacccagat
     1201 ctgtgt
//
LOCUS       DASRPQ010001509         1409 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1446078, whole genome shotgun sequence.
ACCESSION   DASRPQ010001509 DASRPQ010000000
VERSION     DASRPQ010001509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1409
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1446078"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            201..785
                     /locus_tag="VFD73_17200"
     CDS             201..785
                     /locus_tag="VFD73_17200"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI75720.1"
                     /translation="MPTRAAILDTLAASQTQVLAFFHGLSPHDLERPATASDLPGAAL
                     WRAKDHLAHLAHSERNIQHVLRRILAGEPPDVLLRLQYPAGMPLPGTLGDWDALTPEE
                     QERLELAVASLNQTCVDAHRDDTLETLVADFLVARQELVDLLHQFSDEQLAAPVPLVT
                     GERAAGDVFAGKAGHATEHMRSIEEGWRQDVQGV"
     gene            898..>1409
                     /locus_tag="VFD73_17205"
     CDS             898..>1409
                     /locus_tag="VFD73_17205"
                     /inference="COORDINATES: protein motif:HMM:NF015534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Type 1 glutamine amidotransferase-like
                     domain-containing protein"
                     /protein_id="HZI75721.1"
                     /translation="MRLLLTSAGIKNASIHNALVELLGKPIAEASALIIPTAIYPFPG
                     GAGMAWRAICGAANGPLGGLGWKSLGVLELTALPSIADDAWIPTVQETDALLVWGGDP
                     LYLSYWMRQSGLADLLPELPRETVYVGVSAGSMAATATFGETYPDPPRGSGEALTSED
                     IVFATPQGEV"
BASE COUNT          229 a          447 c          484 g          249 t
ORIGIN      
        1 caacctccct acgcgcccag gctcggatgt ggtggtttct cgcggaccga gctgaagggc
       61 ttttcaaatg tcgtgttcta gcaggcgtgg gccatatctc gtgcgtgccg ctcgtagctg
      121 ggcctggcgg agccgtctgg acacgccgta tgcttcccag tgcttcccac tggtcgctcg
      181 gagttgcttg gagaggaatc atgccaacgc gcgcagcgat tctcgacacc ctggcggcgt
      241 cgcagacgca ggttctggcg ttttttcacg ggctcagccc gcatgacctg gagcgcccgg
      301 caacggcgag tgacctgccc ggagccgctc tgtggcgcgc caaggatcat ttggcgcacc
      361 tggcgcacag cgagcgcaac atccagcacg tgctgcgccg tatcctcgcc ggcgagcctc
      421 cagacgtgct cttacgcctg caatacccag cgggcatgcc gctgccgggc actctgggcg
      481 attgggacgc gctgaccccg gaggagcagg agcggctgga gctggccgtc gccagcctca
      541 accaaacctg cgtggacgcg caccgtgacg acacgctgga gacgctggta gcggatttcc
      601 tggtggcgcg gcaggaactc gtggacctcc tgcaccagtt cagcgatgag cagctggccg
      661 ctccggtgcc cctggtcacc ggcgagcggg ccgccggcga cgtgtttgcc gggaaagcgg
      721 gacatgcgac cgagcacatg cgctcaattg aggaaggatg gcgccaggac gttcagggcg
      781 tgtagatggg tgtcttgctg tgccggtcgg caccgtcgtg acccggtgga cagagggctg
      841 ccgcaaccgt gagaccttcg gttcatgttc gtatgcaatc cacaagggag aggcattatg
      901 cggttactgc tcacgtccgc tggcatcaag aacgcgagca tccacaacgc gctggtagag
      961 ctcctgggca agccgattgc cgaggccagt gccctcatca ttcccaccgc gatctacccc
     1021 ttcccaggcg gtgctggcat ggcctggcgg gcgatctgcg gagcagccaa cggccccttg
     1081 ggcggattgg ggtggaagtc gttgggcgtg ctggagctga ccgcgctgcc cagcatcgct
     1141 gacgacgcgt ggatccccac ggtccaggag acggatgccc tgctggtttg gggcggcgat
     1201 cccttgtatc tgtcctactg gatgcgccag tcgggactgg cagacctgtt gccggagctt
     1261 ccgcgcgaga cggtctacgt gggggtgagc gccgggagca tggcggcgac cgccaccttc
     1321 ggcgagacct accctgatcc gcccaggggc agcggcgagg cgctcacgtc ggaagacatc
     1381 gtgttcgcca cgccccaggg agaagtcag
//
LOCUS       DASRPQ010001510         1347 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2717245, whole genome shotgun sequence.
ACCESSION   DASRPQ010001510 DASRPQ010000000
VERSION     DASRPQ010001510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2717245"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1347)
                     /locus_tag="VFD73_17210"
     CDS             complement(<1..>1347)
                     /locus_tag="VFD73_17210"
                     /inference="COORDINATES: protein motif:HMM:NF021942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070009 - serine-type aminopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HZI75722.1"
                     /translation="NHHCARECITSVSTPDSNFQEIGFVARTQAEERKCPGLFVDQLQ
                     SITDVTDQVQHALTSATPARQVAQRNAVIDSIEKGCETDASTQCQVITYYQGGAYSLY
                     RFHRFNDLRLVMAPEEAISFFGGDPDNFTYPRYDVDLSLMRVYENDQPYQPKDYLKWS
                     KDGAKEGDLVLVTGNPGSTGRLLTVAQMEFLRDVQYPAQLSAYERNLSVLRELAQKDE
                     ATRRAVENDIFSLENSKKAVTGYLSGLQDSSLMAKKRAFERDFRRRIAANPKLKARYG
                     GSWDAIATSEKQLAALAKQQRWYSFGGSPLLNIAGGLVRVPEQSKLPDSLRLPQYRGE
                     NLENLKDQILAGLPTTPDQDREMLQAWLTQASKDLPLSDPYLTAFLGGRSPEVAAEAA
                     VNGTKLADSSYRASLLQGGSAAVAASKDPLIVLARKLNPIAMRVQQRAAPLNDVVSA"
BASE COUNT          221 a          430 c          441 g          255 t
ORIGIN      
        1 ggccgacacc acatcattca gcggggccgc gcgctgctgt acccgcatgg cgatcgggtt
       61 gagcttccga gcgagcacga tcagcgggtc cttcgatgcc gcaaccgctg ccgagcctcc
      121 ctgcagcagc gacgcgcgat aggaggagtc cgccagcttg gtaccgttca ccgctgcctc
      181 ggccgcaact tcggggctcc ggccaccgag aaaggcggtg agatagggat cgctcagcgg
      241 caggtccttg ctggcctgcg tgagccaggc ctgcaacatc tcgcgatcct ggtcgggcgt
      301 ggtgggaagg cccgcgagga tctggtcctt cagattctcg agattctcgc cccggtactg
      361 cggcagacga agcgagtcgg gcagcttgga ctgctccgga actcgaacca gcccgcccgc
      421 gatgttcagc agcggggagc cgccgaagct gtaccagcgc tgctgttttg ccagcgctgc
      481 gagctgtttc tccgatgtgg cgatcgcgtc ccaggacccg ccgtagcgag ccttgagctt
      541 cggattcgcg gcgatccgcc ggcggaagtc gcgctcgaac gcccgcttct tggccatgag
      601 actcgaatcc tggagtccgc tgagatatcc ggtgaccgcc ttcttggagt tctccagcga
      661 gaagatgtcg ttttccactg cccgccgagt ggcctcgtcc ttctgggcca gctcgcggag
      721 caccgacagg ttgcgctcgt aggccgagag ctgggccgga tactgcacgt cgcgcaggaa
      781 ctccatctgg gccacggtga gcagccggcc ggtcgagccg gggttgccgg tcaccagcac
      841 gagatcaccc tcctttgcgc cgtccttgct ccacttgagg taatccttgg gctggtacgg
      901 ctggtcgttc tcgtacaccc gcatgaggct caggtcgacg tcatagcgag ggtaggtgaa
      961 gttgtccgga tcgccgccga agaagctgat tgcctcttcc ggcgccatca ccagccggag
     1021 atcgttgaac cggtggaagc gatacagcga gtaggcaccg ccctggtaat aggtgatcac
     1081 ctgacactgg gtgctggcgt cggtctcaca ccccttctcg atcgaatcga tgacagcgtt
     1141 acgctgcgcc acctgccggg ccggcgtcgc cgacgtgagt gcgtgctgca cctggtcggt
     1201 cacatcggtg atcgactgca gctggtcgac gaagagcccc ggacacttgc gttcctccgc
     1261 ctgcgtccgg gccacgaatc caatctcctg aaagttggag tcaggcgtcg agacggaggt
     1321 gatgcactcg cgggcgcagt gatggtt
//
LOCUS       DASRPQ010001511         1016 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_483717, whole genome shotgun sequence.
ACCESSION   DASRPQ010001511 DASRPQ010000000
VERSION     DASRPQ010001511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_483717"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..612
                     /locus_tag="VFD73_17215"
     CDS             <1..612
                     /locus_tag="VFD73_17215"
                     /inference="COORDINATES: protein motif:HMM:NF012497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75723.1"
                     /translation="VPGDPSSAAFLVGAAALAEGGELRIAGVGVNPTRTGFLRVLTRM
                     GARVRIENRSTEFGEPVGDLVVSPSPLRATEVTSEEIPELIDEIPLLAIVASQAAGVT
                     TFRQVGELRVKESDRLELIAENLRAVGGRAEVQGEDLLVDGVGYRPRGRVRTAGDHRL
                     AMAFGVLQTLPGAEIAIDDMECAAVSFPGFTDTLRGIQEGRPR"
     gene            609..>1016
                     /locus_tag="VFD73_17220"
     CDS             609..>1016
                     /locus_tag="VFD73_17220"
                     /inference="COORDINATES: protein motif:HMM:NF014300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HZI75724.1"
                     /translation="MSGGVVAIDGPSASGKSSTARAVAEALGFAHLDSGSLYRGVTLV
                     ALREATRRGLDRAHLLDSLSPETILRAAEDRGLMLQSDGVGFSAYLEGEPAEDALRSA
                     EVTAQVSAIAAIPVVREWVNSRLRAMVRAGQDVV"
BASE COUNT          166 a          301 c          369 g          180 t
ORIGIN      
        1 gtgcccggtg atccttcctc cgcggctttt ctggtggggg cggcggcact cgctgaaggc
       61 ggcgagctcc gcatcgccgg cgtgggggtg aatccaacca gaaccgggtt tctccgggtg
      121 ttgacccgca tgggcgctcg agtcaggatc gagaaccgat ccacggagtt tggcgagcca
      181 gtgggcgacc tggtcgtgag cccgagcccg ctccgggcta ccgaagtaac tagtgaagag
      241 attccggagc tcatcgatga gatcccgctc ctggccatcg tcgcctcgca ggctgctggg
      301 gtgacgacct tccgtcaggt gggagagctc agagtgaagg agagcgatcg gctcgagctc
      361 atcgccgaga accttcgggc tgtcggtggc cgggcggagg ttcagggtga agacctgctg
      421 gtcgatggcg tcggatatcg accgcgcggc agggtccgta ccgccgggga ccaccgtctg
      481 gccatggcct tcggggtgct ccaaacactg ccgggggcag agatcgcgat cgatgacatg
      541 gagtgcgcgg cggtgagttt cccgggattc accgacacac tgcgcggcat tcaggaaggc
      601 aggccaaggt gagtggggga gtggtggcga tcgatgggcc ctcggcctca ggcaagtcca
      661 gcacggcacg ggcggtggcg gaagcgttgg gatttgccca tctcgattcc gggtcgctct
      721 atcgcggggt caccctggtt gcgctgcgcg aggccacgcg tcggggtctg gatcgagccc
      781 acctgctgga ctcgctcagt ccagagacca tcctccgggc agcagaagac cggggactca
      841 tgctccaatc cgatggtgta ggattttccg catacctgga aggtgagccc gctgaggacg
      901 ccctgcgcag cgccgaggtc accgcccaag tatcggcgat tgccgccatc cctgtcgttc
      961 gggaatgggt aaactcccgc ctcagggcca tggtgcgggc gggccaggat gtcgtg
//
LOCUS       DASRPQ010001512         1266 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_184263, whole genome shotgun sequence.
ACCESSION   DASRPQ010001512 DASRPQ010000000
VERSION     DASRPQ010001512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184263"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..855)
                     /locus_tag="VFD73_17225"
     CDS             complement(<1..855)
                     /locus_tag="VFD73_17225"
                     /inference="COORDINATES: protein motif:HMM:NF013810.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HZI75725.1"
                     /translation="MVWRVLLAFTFFMVGSAVPAQAMLDSGQSGPPLETPPAILAAAL
                     RCHDAPSPAGHEPVLLVHGIGSTGPEQWDWNYVPALNHAGFDVCTVDLPYRGTGDMQT
                     SAEYVVDAVRHMRDHYHSKVDVLGWSAGPLVARWAIKYWPDVRDSVDDMVGLEAAYHG
                     TADANLRCAVGSCPPAIWQLSLGSNFVKALNAGDETPGNVSYTSVYSLTDELVTPQLP
                     QSVSAQGGGATNVPIQSICPLRVVDHVQALADAVAYAVVVDAFTHPGPADPARISRSV
                     CGQLFLPGV"
     gene            964..>1266
                     /locus_tag="VFD73_17230"
     CDS             964..>1266
                     /locus_tag="VFD73_17230"
                     /inference="COORDINATES: protein motif:HMM:NF025180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZI75726.1"
                     /translation="MAALTPALIIGVSAVSACPSLPITVREVCDGPPLADRGCAVEDP
                     WGSDLLVALSRVPDPRDGRGVRHQLVTVLAAAVCAVLAGARSYVGIAEWAHDLPVSV"
BASE COUNT          229 a          396 c          426 g          215 t
ORIGIN      
        1 cacgccgggc aggaacagct gcccgcagac gctgcgggaa atccgagccg ggtcagcggg
       61 cccgggatgg gtaaacgcat cgacaaccac agcgtaggcc actgcatccg caagggcctg
      121 gacgtggtcc accacccgaa gcgggcagat gctctggatt ggcacgttgg tggcgccgcc
      181 accttgagcg gagaccgact gaggcagctg cggggtgacc agctcgtcag tcagtgaata
      241 aacgctggtg tagctcacgt tgccgggggt ctcgtcaccg gcgttaagag ccttgacgaa
      301 gttcgagccg agggacaact gccatatagc cggcgggcac gaacccactg cgcaccggag
      361 attagcatcg gccgtgccgt gataggcagc ttccagtccc accatgtcat cgaccgagtc
      421 gcgaacatcg ggccaatact tgatcgccca ccgtgccacc aggggccccg cggaccatcc
      481 caggacgtcg acttttgaat ggtagtggtc gcgcatgtgg cgcacagcat ccacgacgta
      541 ttccgccgag gtctgcatat cacccgtgcc tcggtacggg agatcgacgg tgcacacatc
      601 aaagccggcg tggttgagcg cggggacgta gttccagtcc cactgttccg gcccggttga
      661 gccgatgccg tggactagca gcaccggctc atggcccgcg ggagacggtg cgtcgtgaca
      721 acgcagcgcc gcagccagta tcgccggtgg agtctccaac ggcggcccac tctggccgga
      781 atcgagcatc gcttgcgcgg gcaccgcaga acccaccata aagaaggtga atgccagtaa
      841 aacacgccaa accatgggag ccccctgccc ccagggcctc ggcatagtcc gattactcgg
      901 cgtgtcttcg gtgcgacacg ccggtgatga tgtaatgggg cggacacggc agcacgagtg
      961 atcatggcgg ctctgacccc agccttgatc atcggagtgt ccgccgtgtc cgcttgtcca
     1021 tccttgccca taactgttcg cgaggtctgt gacggacccc cgctggctga tcggggctgc
     1081 gccgttgagg atccgtgggg gtcggatctg ctggttgctc tgtcgcgggt gcccgatcca
     1141 cgcgacggcc ggggcgtacg gcaccagttg gtgacggtgt tggccgcggc ggtgtgcgcg
     1201 gtgctggccg gagcgcgcag ctatgtgggg atcgcggaat gggctcacga cctgcccgtt
     1261 tcggta
//
LOCUS       DASRPQ010001513         2264 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3647491, whole genome shotgun sequence.
ACCESSION   DASRPQ010001513 DASRPQ010000000
VERSION     DASRPQ010001513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2264
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3647491"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(107..1429)
                     /gene="ltrA"
                     /locus_tag="VFD73_17235"
     CDS             complement(107..1429)
                     /gene="ltrA"
                     /locus_tag="VFD73_17235"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: protein motif:HMM:TIGR04416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZI75727.1"
                     /translation="MSLATPDRIRTLQRKLYLKAKAEPDYRFYLLYDKVHRTDILRHA
                     YDLVRSNRGAPGVDGVSCAAIEALGLESWLAGIATELRTKTYQPQPVRRVMIPKPGGG
                     ERPLGIPTIRDRVVQTAAKLVLEPIFEADLEPTAYGYRPGRGAIDAVKAVHRLLCQGF
                     TDVVDADLSKYFDSIPHDALLRSVAARIVDRHVLRLIRLWLKAPVEETDADGRRHMSD
                     GKRSTCGTPQGGVISPLLANRYMNRFLRYWSQKECGEAFRAHVVNYADDFVIVSRGHA
                     ERALAWTRQVMTRLDLTVNEAKTTVRDARQEHFDFLGYSFGPHRYRKDGHWYLGASPS
                     QKSVQRLKERVGEILISSNNAPWEEVRDRLNHRLRGWAAYFAYGTRTMAYRAADNHVY
                     TKVRGFLTRRHKVPSRGTRQFPDHVVFGKLGVVRLRRLHIGAPSIAAG"
     gene            complement(1860..>2264)
                     /locus_tag="VFD73_17240"
     CDS             complement(1860..>2264)
                     /locus_tag="VFD73_17240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75728.1"
                     /translation="PSGYNGAVLVLASNNTAEVSQATVEGGVIREAQPAQHQCTAFLL
                     QAAANQQTAGILFNKICRTVVYEPAIALAIHVTGDHGFINSNTFEFLRVWGAAVAIDF
                     SVVPGYQLARISQCAPTARFTSGGRIHPGSCR"
BASE COUNT          400 a          768 c          645 g          451 t
ORIGIN      
        1 ccgcgctggt agagtcgagg acgggcgcgg cagcagcgct ccgtttcccg tccccgctca
       61 tcaaaccgga cgtgcggatt tcccgcatcc ggctttccga ctggtttcat cccgcagcta
      121 tcgatggagc gccaatgtgg agtcggcgta gccgcaccac tcccagcttc ccgaacacga
      181 catgatccgg gaattgccgt gtgcctcgcg agggcacctt gtgtcgtcgc gtcaggaatc
      241 cgcgaacctt cgtgtagacg tgattgtccg ccgcccggta ggccatggtc cgcgtgccat
      301 aggcgaagta tgccgcccaa ccacgcaagc gatggttcaa ccggtcgcgc acctcctccc
      361 agggcgcgtt attggaggag atcagaatct ccccgacgcg ctccttgagg cgctgcacgc
      421 tcttctgtga cggactcgcc cccagatacc aatgcccatc cttccggtaa cggtgcggtc
      481 cgaagctgta gcctagaaag tcgaagtgct cctgccgcgc atcgcgcacg gtggtcttcg
      541 cttcattcac cgtgagatcg agcctggtca tgacctgccg cgtccacgcc aaagctcgct
      601 ccgcgtgtcc gcggctgacg atgacgaagt cgtcggcgta attcacgacg tgtgcccgaa
      661 acgcctctcc gcattccttc tgggaccagt atcgcaggaa gcggttcatg tagcggttgg
      721 caagcagcgg gctgatcacc ccgccctgcg gcgtaccgca ggtgcttcgc ttgccgtcgc
      781 tcatatgccg tcttccatcc gcatcagtct cctcgaccgg tgccttgagc cataacctga
      841 tcaggcgcag gacatgacga tcgacgatcc gcgccgcgac cgagcgcagc aaggcgtcgt
      901 gcgggatcga gtcgaaatac ttggataaat cggcgtctac cacatcggtg aacccctggc
      961 acagcagtcg gtgcaccgcc ttgaccgcat cgatggcgcc gcggcccggc cggtagccat
     1021 aggcagtggg ttcgaggtct gcttcgaaga tcggctccag caccagcttc gcagcggtct
     1081 gcaccactcg atcccgaatc gtcggaatcc caagtggcct ttcaccgccg cccggtttcg
     1141 ggatcatcac ccggcgcacc ggctggggct gatacgtctt ggttcgcagt tctgtcgcga
     1201 taccggccag ccagctctcc agccccagcg cctcaatcgc cgcgcagctc acgccatcca
     1261 cgcccggagc gccacgattg gaacgcacca gatcataggc atgacgcaga atgtccgtgc
     1321 ggtgaacctt gtcgtagagc aggtagaacc ggtagtccgg ctccgccttc gctttgaggt
     1381 acagctttct ttgcagcgtc ctgattctat ccggtgttgc caggctcatc gccaatcacc
     1441 aatcctccgc tcctccgaaa gcgcaccaga agtcagggcc cttccctccg ctggcattac
     1501 ccagcctcgg cagtactacg accctgtccg acgcccgcgc ggaccatcgt caagacgatg
     1561 ttcggaggcg cgacctccgt tccgaacggg cctcccccaa ttacccggtt cacccttccg
     1621 gcatgccgtg cccactaccc cgatggaccg cgcgggtgcg tctgtcggtt gcttccccgc
     1681 tacactcggg ccttccccgt atcccaggcg ggtcggcgtc catgacttca ctttcgaggc
     1741 ctgctcaggc ttcactcgcg ttacggcctg ccggattgct cagccaccca aggtggcctt
     1801 cgtcacgagg cttcgaccca gccggtctcc cgtccaagcc gctcgtcagc taccaggtcc
     1861 taccgacaac ttcctgggtg gatccttcct ccactggtga accgcgccgt tggggcgcac
     1921 tgagaaatgc gggctaactg gtatccaggg acgacagaga agtcgatcgc gactgctgct
     1981 ccccacactc ggaggaactc gaacgtgttc gagttaatga agccatgatc gcccgttaca
     2041 tgaattgcca gggcaatcgc cggctcgtaa acgacagtgc ggcaaatttt gttgaataga
     2101 atgcccgcgg tctgttgatt ggcagccgcc tgcagcagga atgcggtgca ctggtgttgc
     2161 gcaggttgcg cctcccggat gacaccacct tcgaccgttg cttgcgagac ctcggcagta
     2221 ttgttacttg ctaggacgag gacggcacca ttgtatccgg aggg
//
LOCUS       DASRPQ010001514         1809 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1447035, whole genome shotgun sequence.
ACCESSION   DASRPQ010001514 DASRPQ010000000
VERSION     DASRPQ010001514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1809
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1447035"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1703)
                     /locus_tag="VFD73_17245"
     CDS             complement(<1..1703)
                     /locus_tag="VFD73_17245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HZI75729.1"
                     /translation="MASVPEIFQTMSYGPAPESAGPAQAWLEQHGREFGLFIGGEWTR
                     VGTGTFETLNPATAKPLARLTQATPADVDHAVHAARAAQQEWWAIGGHGRARYLYALA
                     RGIQKHHRFLAVLESLDNGKPIRESRDIDVPLVARHFYHHAGWAQLLHRELPDKVPLG
                     VVGQIIPWNFPLLMLAWKIAPALATGNTVVLKPAEFTSLTALRFAELCQEIGLPAGVV
                     NIITGDGRTGESLVRHPDVDKIAFTGSTEVGRLIRTATAGSGKKLSLELGGKSPFVVF
                     PDADLDSVVEGVVDAIWFNQGQVCCAGSRILVQEGIAERLVSKLKARMETLRVGDPLD
                     KAVDMGAIIAPVQLEKIQALVARGTEEGAKRWQPSWSCPRDGWFFPPTLFTDVSPAAT
                     IAQVEIFGPVVVLLTFRTPEEAVELANNTRYGLAASIWTENINLALDVAPKVKAGTIW
                     INCTNVFDAASGFGGYRESGYGREGGREGLREYVRSAGQRGSGAAGQESGRGGKSGSD
                     GKSGRSRSARSSRSARSASSSRAASTAGSATSAFTAPPTLPPIDRTPKLYIAGKQTRP
                     DS"
BASE COUNT          325 a          589 c          564 g          331 t
ORIGIN      
        1 gaatcgggcc gagtttgctt cccggcgata tagagctttg gagtacgatc gatcggaggg
       61 agagtcggag gggcggtaaa ggcggaagta gcggaaccgg cggtagaggc cgcacgtgac
      121 gaagaggcgg aacgtgcgga acgtgaggaa cgtgcggaac gtgaccggcc gctctttccg
      181 tcgcttccgc tcttaccgcc tcttccgctt tcctgccccg ctgccccgct gcctcgctgc
      241 cccgccgacc tcacatactc cctcagaccc tcgcgcccgc cctcgcgacc gtatccgctc
      301 tcgcgatagc cgccgaagcc gctcgccgca tcgaagacgt tggtgcagtt gatccagatc
      361 gttcccgcct tcaccttggg cgcgacatcc agcgccagat tgatgttctc ggtccaaatg
      421 ctcgccgcga gaccatagcg agtgttgttg gccagctcta ccgcttcttc cggcgttcgg
      481 aaggtcagga gcacgaccac aggtccgaag atctccacct gagcgatggt cgcggccggt
      541 gaaacatcgg tgaacagggt gggcggaaag aaccaaccgt ctcgcggaca gctccacgac
      601 ggctgccaac gtttcgcgcc ctcctccgtt ccccgagcca ccagtgcctg gatcttctcc
      661 aactggaccg gtgcgatgat tgctcccatg tcgacggctt tgtccagcgg atcgccgacc
      721 cgcagcgttt ccattcgggc cttgagcttg ctgacaagcc gttcggcgat gccttcctgg
      781 accagtatcc gcgacccggc gcagcagacc tggccctggt tgaaccagat cgcgtcgacc
      841 acgccttcga ctacgctgtc gagatcggcg tcggggaaga cgacgaaggg agatttgcct
      901 cccagctcga gcgaaagctt cttgccgctg ccggctgtgg ctgtgcggat cagccggccc
      961 acctcggtcg atccggtaaa ggcgatcttg tcgacgtcgg ggtgacggac cagcgattcg
     1021 ccggtgcgcc cgtctccggt gatgatgttc acgacgcccg cgggcaatcc aatctcctgg
     1081 cagagttcgg cgaatcggag agcggtaagc gacgtaaatt cggcgggctt gagcacgacg
     1141 gtgttaccgg tggcaagtgc cggcgcgatt ttccacgcca gcatcaggag cggaaagttc
     1201 caggggatga tctgcccaac gacgccgagg ggaaccttgt ctggcaactc tcggtgcagc
     1261 agctgggccc agcccgcgtg atgatagaag tgccgagcca ccaagggcac gtcgatgtcg
     1321 cgcgactccc ggattggctt tccgttgtcg agcgactcca gcaccgccag aaagcgatgg
     1381 tgcttctgga tcccgcgcgc cagggcatac aggtagcgcg cccgcccgtg tccgccgatc
     1441 gcccaccact cctgctgcgc ggcccgagct gcgtgcaccg cgtggtccac gtcggcggga
     1501 gttgcctggg tcagccgggc cagcggcttc gcagtggcag gattgagcgt ctcgaaggtc
     1561 ccagtgccga ccctggtcca ttcaccgccg atgaacaggc cgaactcgcg gccgtgctgc
     1621 tccagccacg cctgggccgg cccagccgat tcgggtgccg gaccgtacga catcgtttgg
     1681 aaaatctcag ggacagatgc cataagacgt cgcagctccg gaaaaacttc ttactacaga
     1741 ggcacagagg acacaaagga gcacttacct gagaagatct ccatctctgt gtactctgtg
     1801 cctctgtgg
//
LOCUS       DASRPQ010001515         3775 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4569436, whole genome shotgun sequence.
ACCESSION   DASRPQ010001515 DASRPQ010000000
VERSION     DASRPQ010001515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3775
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4569436"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..511)
                     /locus_tag="VFD73_17250"
     CDS             complement(<1..511)
                     /locus_tag="VFD73_17250"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZI75730.1"
                     /translation="MTFQSLASLGLRCIVALLIGATGVAAQSAQPWNGRGIAPPRVAI
                     EDSASPTASQGKTAGARAVEMVGLTVSDMDRSLQFYTQVLDFVKVSDAEVAGSLYETL
                     EGVFGARLRVVRLRLGDEVLQLTQYLAPQGRPFPADSRSNDRWFQHVAIIVSDMDRAY
                     ARLRQFKVQH"
     gene            complement(508..2130)
                     /locus_tag="VFD73_17255"
     CDS             complement(508..2130)
                     /locus_tag="VFD73_17255"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HZI75731.1"
                     /translation="MSSHYDVIIIGTGAGGGTLAHRLAPSGKRILLLERGDYVIRELD
                     NWSTRAVNVDGKYQTKEKWRDKAGNELHPHTNYWVGGNTKFYGSALFRLRREDFGELR
                     HHGGISPAWPITYDEIEPYYTEAEHLYQVHGQRGEDPTEPPTSAPYKYPAVSHEPRLQ
                     QLSEDFSALGLHPFHTPLGIMLDEKNRRVSRCIRCSTCDGHPCLVNAKSDAQVVCVDP
                     ALEYPNVTLLTGAYVSRLETSGSGREVTRVSVERNGERESYSGDIVVAACGAINSAAL
                     LLRSANDQHPRGLANGSDVVGRHYMGHINSVLMALSRCPNPTVFQKSLAVNDFYFGSP
                     EWEFPMGHISFVGKLDGVTLSAGAPAIAPGWTLELMGKHSLDFWLTSEDLPDPENRVT
                     LDRNGNIVLSYTPNNGEGHKRLIAKLEKLMNQQRSCPIHGRECHQGLFSRNLFVGQRI
                     PLAGVAHQNGTIRFGADPVTSALDRNCKAHEVDNLYVVDGSFFPSSGAVNPALTIMAN
                     ALRVGDHILDRMGARNSGAVAINSELAAGASV"
     gene            complement(2366..3100)
                     /locus_tag="VFD73_17260"
     CDS             complement(2366..3100)
                     /locus_tag="VFD73_17260"
                     /inference="COORDINATES: protein motif:HMM:NF038123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spondin domain-containing protein"
                     /protein_id="HZI75732.1"
                     /translation="MTFTRTLVLAATAVALARSAAAQNGGATKFTIKVENISQGEVLK
                     LSNGGSAPFVSAPVLWVIHTGNTNPIFAGGKPDAGLGLEALAETGNPGPLAQSLSGKK
                     SIVQVGADATPVGSSSQGPIPPGQGYEFEITAKPGQMLSTAWMFGQSNDLFYSNDRPI
                     ALFTSGGKPVSGEMTAQLSLWDAGTEVNEEPGLGPNQGPRQATPDAGVPEHQGIAHVH
                     DKYSYPRIADVLRLTITPAADAMSAR"
     gene            complement(3113..3625)
                     /locus_tag="VFD73_17265"
     CDS             complement(3113..3625)
                     /locus_tag="VFD73_17265"
                     /inference="COORDINATES: protein motif:HMM:NF021996.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DM13 domain-containing protein"
                     /protein_id="HZI75733.1"
                     /translation="MRRRNWVVGLAVLGGIGWYAFRPELLFVHKRVNEGLPVAAAQTN
                     AMSAMSAAEQPAGALASGRFHSVAHETHGTASVIRLADGSRILRLTDFATSNGPDVRV
                     YLVKATDASDNATVERAGFIELGKLKGTDGDQNYTVPADLDLSAYRAVTIWCKRFSVN
                     FATAPLTPIS"
BASE COUNT          662 a         1190 c         1216 g          707 t
ORIGIN      
        1 cgtgctggac cttgaactgg cgaagccggg catacgcccg atccatgtcg ctcacgatga
       61 tcgcgacgtg ctggaaccag cggtcgttgc tccgcgagtc ggcagggaag ggcctgccct
      121 gcggagcgag atactgagtg agttggagga cctcgtcccc gagccgcagg cggaccaccc
      181 ggagccgagc tccgaataca ccctccagcg tctcgtacag cgacccggcg acctcggcat
      241 cggagacctt cacgaaatcg agcacctggg tgtagaactg gagcgagcgg tccatgtcgg
      301 atacggtcag cccgaccatt tccaccgctc gggcgccggc agttttgcct tgtgatgcgg
      361 tcggagaagc gctgtcctcg atggcgacac gcggaggggc aatacctctg ccgttccacg
      421 gctgggcaga ctgtgctgcg actccagtgg caccaatgag gagggcaact atacacctca
      481 gcccgagcga agccagggac tgaaaggtca taccgacgct cctgcggcta gttcactatt
      541 gatggcgaca gcgccgctgt tccgcgcgcc cattcgatcc agaatgtggt cgcccaccct
      601 cagcgcgttc gccatgatgg tgagcgccgg gtttaccgcg ccactggacg ggaagaagct
      661 cccgtctacg acatagaggt tgtcgacctc gtgcgcttta cagttgcggt ccagcgccga
      721 tgtaaccggg tcggcgccga agcgaatcgt gccgttctga tgcgcgacgc cggccagggg
      781 aatccgctgc cccacgaaga gattccggga gaacaatccc tgatgacact cgcgcccgtg
      841 aatcgggcag ctgcgctgct gattcatcag cttctccagc ttcgcgatca gccgcttatg
      901 gccttcaccg ttgttgggcg tgtatgacag aacgatgttg ccgttccggt ccagcgtcac
      961 ccggttctcc ggatcgggca gatcctccga ggtgagccag aaatcgagcg agtgcttgcc
     1021 catcagctcc agcgtccatc ccggcgcgat tgcaggcgca ccagccgaga gggtgacccc
     1081 gtccagcttc ccgacgaagg agatatggcc catggggaac tcccactccg gcgagccgaa
     1141 gtagaaatcg ttcaccgcca ggctcttctg aaataccgtg ggattggggc agcgcgacag
     1201 cgccatcagc actgagttga tgtgtcccat gtaatgccgg ccgaccacgt cggagccgtt
     1261 ggccagacct cgcgggtgct gatcgttggc cgatcgcagg agcagcgccg ccgagttgat
     1321 cgcaccgcac gccgcgacca cgatgtcgcc gctgtagctc tcccgctcgc cgttccgctc
     1381 gacactgacc cgggtcacct cgcgtcccga gccgctggtc tcgagcctcg agacgtacgc
     1441 gccggtgagc agggtgacgt tgggatattc cagcgccgga tcgacgcaca cgacctgcgc
     1501 gtcggacttc gcgttcacca ggcaggggtg accgtcgcag gtgctgcagc ggatgcaccg
     1561 gctcactcgc cggttcttct catccagcat gatgccgagt ggtgtgtgga acgggtggag
     1621 accgagcgca ctgaagtcct cgctcaactg ctgcagccgc ggctcatggc tcaccgcggg
     1681 atacttgtag ggagcgctcg tcggtggctc agtcgggtct tcgcctcgct ggccgtgcac
     1741 ctggtagaga tgttccgcct cggtgtagta gggctcgatc tcgtcgtagg taatcggcca
     1801 cgccggagag attcccccat gatgccgcag ctccccaaaa tcctctcggc gcaaccggaa
     1861 caaggcagag ccgtagaatt tggtgttgcc gcccacccag tagttggtgt ggggatggag
     1921 ctcattgccg gccttgtccc gccacttctc cttggtctga tactttccgt ccacgttcac
     1981 cgcgcgtgtg ctccagttgt ccagctcccg gatcacgtag tcgccccgct ccaggagcag
     2041 gatccgcttg ccggacggcg ccagtcggtg ggccaacgtg ccaccgccgg caccggttcc
     2101 gatgatgatg acgtcgtaat gggaagacat cgcggtgccc gtgattgatg gtgaatgggg
     2161 tgaccagttc aacaaacagc tgagcggtga gcggtaagcg gtgagcgggt tcttcccctc
     2221 gctcttcctg ctggacctga gataccgctg cgatttccgg agtcaagctg ctcggtccgt
     2281 ttagcttgcc ctgagcgcag cagtctatcc ttaccgcctt accgccttac cgccttaccg
     2341 ccttaccgcc ttaccgcctt accgcctacc tcgcactcat cgcatccgct gccggcgtaa
     2401 tcgtcagccg gagcacatcg gcgatccggg gatagctgta cttgtcgtgc acgtgcgcga
     2461 tgccctggtg ctccggtact ccggcatccg gggtcgcctg ccgagggccc tggttgggac
     2521 cgagtcccgg ctcttcgttc acctccgtgc ccgcgtccca taacgagagc tgcgcggtca
     2581 tctctcccga aaccggtttg ccgccggagg tgaagagcgc gatcggccga tcgttggagt
     2641 agaagagatc gtttgactgg ccgaacatcc atgcggtcga gagcatctgg ccgggcttgg
     2701 cggtaatctc gaactcgtag ccctgtcccg gcggaatcgg tccctggctg ctggagccaa
     2761 ccggcgtcgc atcggcaccg acctgcacaa tgctcttctt gccgctgagc gactgggcca
     2821 gcggaccagg attaccggtc tctgccagcg cctcgagtcc caggccggcg tcgggtttcc
     2881 cgccggcgaa gatcgggttg gtgttgccgg tatgaatcac ccacagcacc ggagccgaga
     2941 cgaagggagc ggacccgccg ttcgagagct tcagcacctc accctgcgag atgttctcca
     3001 ccttgatggt gaacttcgtg gccccgccgt tctgcgcggc tgcgctcctg gccagggcga
     3061 cagccgtggc ggccagaacc aatgtgcgag tgaacgtcat cggagtctcc ggtcaggaaa
     3121 tcggggtgag aggcgcggtc gcaaagttga ccgagaagcg cttgcaccag atggtcacgg
     3181 cacgataggc gctcagatcg agatcggccg gtaccgtgta gttctggtcg ccgtcggtgc
     3241 ccttgagctt gcccagctcg atgaacccgg cgcgctcgac cgtggcgttg tcggaggcgt
     3301 cggtcgcctt gaccagatag acccgcacgt cgggaccatt cgaggtggca aagtcggtga
     3361 gacgaagaat gcggctgccg tcggccagac gaataacgct ggcggtacca tgggtctcat
     3421 gggcaacgga gtggaaccgg ccgctcgcca aagctccagc gggttgctcg gcggcgctca
     3481 tggcgctcat ggcgttggtt tgcgcggcgg ccacgggcag accctcgttc acccgtttgt
     3541 gcacgaaaag cagctccggg cggaacgcgt accagccgat gccgcccagc actgcgagcc
     3601 caacaaccca gttgcgacga cgcattcgtg ttctccttcg gttcagtcgg tagagagatt
     3661 cgttggtgtc gcggggtgta atgcgggttg gcgggcaaag gttccagggg gaaggaagag
     3721 cgtgagcggg agaggaagag cgtgagcggg aaacgaaaga tcggagcggg aaatc
//
LOCUS       DASRPQ010001516         2529 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1767744, whole genome shotgun sequence.
ACCESSION   DASRPQ010001516 DASRPQ010000000
VERSION     DASRPQ010001516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2529
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1767744"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1492)
                     /locus_tag="VFD73_17270"
     CDS             complement(<1..1492)
                     /locus_tag="VFD73_17270"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HZI75734.1"
                     /translation="MSAQRIEVEFAGRPLVIETGRVARQAAGSAVVSFGETMVLAAVT
                     VSPNVSSLPFFPLTVEYREKTYAAGKIPGGFLKREGRPSDKEILASRLIDRSIRPLFP
                     EGFKNEVQVFVTVLSADQENDADILGVVAASTALSLSGVPWNGPLAGVRIGRVEGNWI
                     LNPTFQQLEFSTIDLVVSGSTDSIVMVEGGALEISESEMLEALKVAQRGIRDVIKIEQ
                     QLIAKVGAPKKFEWTKAEPDQALVTRVREAAESQMAQAINAKDKAGRSQAVKAVKEQA
                     LEALAPEFAEQGREVGTELDDIEYRVMRSQVLQRGERVDGRDLDTIRPITIETRVLPR
                     THGSALFTRGQTQALVSATLGTTDDEQRIDSIDVPGETTKSFMLHYNFPPYATGEVKM
                     MRGTSRREIGHGALAERALQPLLPQYEDFPYTLRVVSEILESNGSSSMATVCGGSLAL
                     MDAGVPMKAPCAGVAMGLIKEGDKVAILTDILGSEDHLGDMDFKVAG"
     gene            complement(1618..1878)
                     /gene="rpsO"
                     /locus_tag="VFD73_17275"
     CDS             complement(1618..1878)
                     /gene="rpsO"
                     /locus_tag="VFD73_17275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HZI75735.1"
                     /translation="MSFDKQAVVAKHQTHPSDTGSAKVQIALLTERINSLTEHFRTHS
                     KDHHSRRGLLKMVGTRRRLLTYLRRSDLPTYRALIEQLGLRH"
     gene            complement(1993..>2529)
                     /locus_tag="VFD73_17280"
     CDS             complement(1993..>2529)
                     /locus_tag="VFD73_17280"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease"
                     /protein_id="HZI75736.1"
                     /translation="VARGADHILPFTLKPFLDTIPGPDGKPRPVGRIGAAVATDVVTQ
                     KLTLGEAIGEGANATVRASTQIVRTVRGLFSGKISGRTVGGPILIGQLAGQSVRLGWD
                     VFLGYMALISINLAILNLLPVPVLDGGQFLFLLAEAIIRRPLPMKLRERLTTVGLVLI
                     VLLMGLAFSNDLRRIFGG"
BASE COUNT          477 a          804 c          763 g          485 t
ORIGIN      
        1 tcccggcaac cttgaaatcc atgtctccga gatggtcctc cgagcccagg atgtcggtca
       61 ggatagcgac tttgtcgccc tccttgatca gccccattgc gacaccggcg cagggggcct
      121 tcatcggaac gcccgcgtcc atcagcgcga gtgacccgcc gcaaaccgtg gccatcgagg
      181 aagacccatt ggattcgaga atttccgaga ccacccgcag ggtatagggg aaatcctcgt
      241 actggggaag caagggctga agggcacgct ccgccagcgc gccatggccg atctctcgcc
      301 ggctggtacc gcgcatcatc ttgacttcgc cggtggcata cggcgggaag ttgtaatgca
      361 gcatgaacga cttggtggtc tcccccggca cgtcgatgct gtcgatccgc tgctcgtcat
      421 cggtcgttcc cagggtggcc gagaccagcg cctgggtctg tccgcgagtg aagagagcgg
      481 agccgtgggt ccgggggagc acccgggtct cgatggtgat cggacgaatc gtatccagat
      541 cacggccatc cacccgctca ccccgctgaa gcacctgaga ccgcatcact cggtactcga
      601 tatcgtccag ctccgtcccg acctcgcgtc cctgctcggc gaactcggga gccagcgcct
      661 ccagcgcctg ctccttcacc gccttgaccg cctgcgatcg acccgccttg tccttggcat
      721 tgatcgcctg agccatctgg gattcagccg cctcccgcac ccgcgtcacc agtgcctggt
      781 ccggctccgc cttggtccac tcgaatttct tcggggcgcc gaccttggcg atcagctgtt
      841 gctcgatctt gatgacgtct cgaattcccc gttgcgcgac cttcagcgcc tccagcattt
      901 cactctcgga gatctccagc gcgccaccct cgaccatgac gatcgagtcg gtggatccgc
      961 tgaccaccag atcgatggtg gagaattcca actgctggaa ggtgggattc aggatccagt
     1021 ttccctcgac ccggccgatg cggactccgg cgagcggtcc attccaggga acgccagaca
     1081 ggctgagcgc cgtggacgcc gcgacaacgc cgaggatatc cgcgtcattt tcctgatcgg
     1141 cggagagcac agtcacgaag acctggacct cattcttgaa gccctcgggg aagagcggcc
     1201 ggatcgagcg gtcgatcagc cggctggcca gaatttcctt gtccgacggg cgtccctcac
     1261 gcttgagaaa cccgcccgga atctttccgg cggcataggt cttttcgcga tattcgaccg
     1321 tgagaggaaa gaacgggagg ctggacacgt tgggagacac ggtgactgcc gcaaggacca
     1381 ttgtctcgcc gaaacttacg acagcggatc cggcggcttg acgggcaaca cgaccggttt
     1441 cgatgacgag gggacggccg gcaaattcaa cttcgatacg ttgtgcgctc actgcttacc
     1501 ttctctctgt aggtggcgtc tttgctgctg agtcgggagt tcgagtcgag aggtccgact
     1561 gatacgacaa agggcgtccc gattttccca tcaggacgcc catgcgcggc acactggtta
     1621 gtgccggaga ccgagctgct cgatcagcgc tcgataggtc ggaagatcgc tgcgcctcag
     1681 gtaggtcagt aaccggcgcc gtgtgcccac catcttgagg agcccacgcc ggctgtggtg
     1741 gtccttggaa tgggtacgga agtgctcagt gagcgagttg attcgctcag tgagtagcgc
     1801 gatctgcacc ttggccgacc cggtgtcgct cgggtgggtt tgatgctttg ctaccactgc
     1861 ctgtttgtcg aagctcatgc agccatcgtc ctctgactaa gtctcggtac tgtaattcgt
     1921 tgtaacacgg caaaataagg ggggtcagca gtcgcgggca agagccgcac tccggccgca
     1981 gcgctgacca cgttagccgc cgaaaatccg tctgagatca ttcgagaacg cgagtcccat
     2041 cagcaggacg atgagcacga gacccaccgt ggtgagccgc tcccggagct tcatgggcag
     2101 cggccggcgg atgatcgctt cggccagaag gaagaggaac tgtcccccgt cgagcaccgg
     2161 gaccggaagc aggttcaata tggccagatt gatcgagatc agcgccatgt accccaggaa
     2221 tacgtcccag ccaagtcgga cactctggcc cgccagctgt ccaatcagaa tgggcccgcc
     2281 cacggttcgc ccggagattt ttccactgaa gagaccccgc accgtccgga caatctgagt
     2341 cgaggctcgg accgtcgcgt tggctccttc gccgattgcc tcgcccagag tcagcttctg
     2401 ggtcaccacg tccgtggcca cagcagcccc gatccgtccc acgggccgag gctttccatc
     2461 ggggccggga atcgtgtcga gaaatggctt caaggtaaac ggcagaatgt gatcagcacc
     2521 tcgggccac
//
LOCUS       DASRPQ010001517         1782 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3647936, whole genome shotgun sequence.
ACCESSION   DASRPQ010001517 DASRPQ010000000
VERSION     DASRPQ010001517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3647936"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            600..1157
                     /locus_tag="VFD73_17285"
     CDS             600..1157
                     /locus_tag="VFD73_17285"
                     /inference="COORDINATES: protein motif:HMM:TIGR00026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family deazaflavin-dependent
                     oxidoreductase"
                     /protein_id="HZI75737.1"
                     /translation="MGSAVVPHPADRGSKPLLGLRRQPGRLALAVFRLPLLLYRRGWG
                     WLLGDTFLLLVHEGRKTGKRYSTVAMVLRYEPHTREAVICSAWGQDADWIRNIRARPA
                     LQVQIGRQSFTTQQRFLSQDESLAVLAGFRHRHPHRSRLLASVLGWQDLGSDAAAREF
                     VSTRPFVSLRLIDSDHQLTGGEDHE"
     gene            1180..>1782
                     /locus_tag="VFD73_17290"
     CDS             1180..>1782
                     /locus_tag="VFD73_17290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75738.1"
                     /translation="MPGSPATGPDSEDGGTGPAQRQVSADSDGLLAVMKNLSRYHREH
                     EKYYSEEPLADAIALQRTARTLIALAERWASVEPAAEPAPSPFAGTPDLNDDRAIETS
                     GVLFMEGEGEPAEISRIKSELETIAASSEQSGSWLGAAMEASWGMAEALLAYPQLADL
                     LGERHRIIGNNWQNASTAQLVARYLRRAVTVMERVDFAPAA"
BASE COUNT          305 a          617 c          585 g          275 t
ORIGIN      
        1 cagaggccaa ctgtccttac cggcagggac cttcgccacc tcccgggcgc agatgcgtca
       61 cctgtgatga ggcggccagc ccagcatccg ttaccaagaa ccgcagttcg cgcccatacc
      121 acgctcacga tcaccagtag ggtgccggtg acggtccccg gtcccatcgg ccacagccac
      181 gctgggagtc tccgggcccc cgggggaggc acgccagcag aattgcctga tatgcgcccg
      241 gcacctgcct gcaccatcag cgcacccaga caaacaaagt cggcgatcta gcacatcgcg
      301 atcgttgtgg gccacgtgtg ctgacgacgc tctgttccaa gccctcggcc gtttggcgta
      361 gtcgtaatgc agggaactgc tcgcgggcgt ggtgagtctg ccgccggttc atgagcagag
      421 tgaccgcagg catactcggc ccgcgcaata gccccgggct ggggttccgc gaagagcacg
      481 ctcacggttc ccctggggga atccgcgcag gaccttcgcc cctggcggga gcgccgtcgc
      541 caggcgttcg gtgaatgttg gagccagccg ccgctggtgc tggcccgggg gtgatggcag
      601 tgggaagcgc tgttgtaccg catccagccg accgcggatc gaagccgctg ctggggcttc
      661 gacggcagcc aggccgtctc gcgctggcgg ttttccggct gccgctgctg ttgtatcgcc
      721 ggggctgggg ctggcttctg ggggacacat tcctgctgct ggtccacgag ggacgaaaga
      781 cgggcaagcg ttactccacc gttgccatgg tcttgcggta tgagccgcac acccgggagg
      841 cagtcatctg ctcggcctgg ggccaggacg ccgactggat ccgcaacatc cgcgcccgcc
      901 cggcgctgca ggtccagatc gggcggcagt cgttcactac acagcagcgc ttcctctccc
      961 aggacgagag cctggccgtg ctggccgggt tccggcaccg gcacccgcac aggtcacgtc
     1021 tgctcgcatc ggttctgggc tggcaagacc tcggctccga tgctgccgcc cgcgagttcg
     1081 tcagcaccag gccattcgtc tccctgcgcc ttatcgactc agaccaccag ctcacgggcg
     1141 gcgaggacca tgagtgaccc agcgcacgag cgcccgccag tgccgggcag ccccgccacc
     1201 ggccctgaca gcgaagatgg tggcaccgga cctgcgcagc gccaggtcag cgctgacagc
     1261 gacgggctgc tggccgtgat gaagaacctc tcccgatatc accgcgagca cgagaagtac
     1321 tactccgagg aaccgctcgc cgacgccatc gcgctgcagc gcacagcacg cacgctgatc
     1381 gcccttgcgg aacgatgggc ctccgtcgag cccgccgcgg aacccgctcc cagccccttt
     1441 gccggaacac cggatctgaa cgacgaccgc gcgatcgaga ccagcggcgt gctgttcatg
     1501 gaaggcgagg gcgagcccgc ggagataagc cggatcaagt ccgagctcga aacaattgcc
     1561 gccagcagcg agcagagcgg ttcttggctg ggcgccgcga tggaagcctc ctggggcatg
     1621 gcagaagcgc tgctggccta tccgcagctc gccgatctgc tgggagagcg gcacaggatc
     1681 atcggcaaca actggcagaa cgcttccacc gctcagctcg tcgcacggta ccttcggcgg
     1741 gccgtcacgg tgatggaacg ggtcgacttc gcaccagccg cg
//
LOCUS       DASRPQ010001518         1659 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2989724, whole genome shotgun sequence.
ACCESSION   DASRPQ010001518 DASRPQ010000000
VERSION     DASRPQ010001518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1659
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2989724"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VFD73_17295"
     CDS             <1..186
                     /locus_tag="VFD73_17295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75739.1"
                     /translation="PAAGNPWRATTLEWQTPETPPGHGNWGKELPVVYRWAYDYNVPG
                     AAEDFIPQNQPGPVRTA"
     gene            200..862
                     /locus_tag="VFD73_17300"
     CDS             200..862
                     /locus_tag="VFD73_17300"
                     /inference="COORDINATES: protein motif:HMM:NF012720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HZI75740.1"
                     /translation="MSVAILFFGAVGAIAVWWLSQQRLTAKPWLEEGPIGDVRSADAS
                     SLLPKLGLGIFLAVVGSLFSLFILAYSIRLGMGDWRPLPPPKLLWLNTGVLILSSLAL
                     HWAQVAARRGEIDGVRTGLLAGGASILAFLAGQLLAWKQLTAAGYYLTTNPANSFFYL
                     LTAAHGLHLLGGLVALGRTAARAWLGFEMEQVRLSVELCAMYWHFLLLVWLVLFGLLL
                     HG"
     gene            879..1601
                     /locus_tag="VFD73_17305"
     CDS             879..1601
                     /locus_tag="VFD73_17305"
                     /inference="COORDINATES: protein motif:HMM:NF012720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-copper oxidase subunit III family protein"
                     /protein_id="HZI75741.1"
                     /translation="MTEHALTQTGLAANQAGGWKGVAADWASDQRTFKNVTWGKAMMW
                     IFLLSDTFIFSCFLLSYMTVRSSTTIPWPNPSEVFALRIGGAEIPLILIAIMTFVLIS
                     SSGTMAMAVNFGYRRDRLKTAVLMVLTAALGATFVCMQGFEWTKLILEGVRPWGNPWG
                     APQFGSCFFMITGFHGTHVTIGVIFLLIIARKVWRGDFDRGERGFFTSRKGRYEIVET
                     MGLYWHFVDLVWVFIFAFFYLW"
BASE COUNT          256 a          542 c          538 g          323 t
ORIGIN      
        1 cctgcagccg gcaatccctg gagggccacg acgctggagt ggcagacacc cgaaactcca
       61 ccagggcatg gcaactgggg caaggagctg ccggtggtct accgctgggc ttacgattac
      121 aacgtgcccg gcgcagcgga ggatttcata ccccagaacc agccgggacc cgtgcggacc
      181 gcctaggaag gccgcgccct tgagcgtcgc aatcctcttt ttcggtgcgg tcggggcgat
      241 tgccgtgtgg tggctgtcgc agcagaggct gacggccaag ccctggctgg aagagggacc
      301 gatcggtgac gtccgtagcg cggacgcatc atccctcctt ccgaagctcg ggctaggcat
      361 ttttctcgct gtcgtcggct cgttgttctc gctctttatc ctcgcctact ccatacgcct
      421 gggcatgggg gactggaggc ctcttccccc gccgaagctc ctatggctca acaccggcgt
      481 gctgatcctg agcagcttgg cgctgcactg ggcgcaggtt gccgcacgcc ggggcgagat
      541 cgacggcgtc aggaccggcc tgctcgccgg tggcgcgtcc atcctcgcgt tcctcgccgg
      601 tcagctcctg gcgtggaagc agctgaccgc cgccggctac tacctgacga ccaacccggc
      661 caacagcttc ttctacctgc tcaccgccgc gcacgggctg cacctgctgg ggggcttggt
      721 ggccttgggc aggaccgccg ccagggcgtg gctcggcttc gagatggagc aggtgcgcct
      781 gagcgtggag ctctgcgcca tgtactggca ctttctgctc ctagtctggc tggttttgtt
      841 cggtctgctg ttgcacggct gaagaggatc gggggcaaat gacagagcat gcgctgacac
      901 agacaggctt ggccgccaac caggctgggg gctggaaggg cgtcgcggcc gactgggcct
      961 cggaccagcg cacgttcaag aacgtcacct gggggaaggc catgatgtgg atcttcctcc
     1021 tgagcgacac cttcatcttc agctgctttc tgctctccta catgacggtg cgctcgtcca
     1081 cgaccattcc ctggcccaac cccagcgagg tgttcgcgct ccggatcggc ggcgccgaga
     1141 tccccctcat cctgatcgcc attatgacct tcgtcctgat cagcagcagc gggacgatgg
     1201 caatggccgt caacttcggc taccgccgcg accgcctcaa gaccgcggtc ctgatggtgc
     1261 tgaccgcggc gcttggcgcc accttcgtct gcatgcaagg tttcgagtgg accaagctca
     1321 tcctggaggg ggtccggccc tggggcaacc cgtggggcgc gccgcagttc ggctcgtgct
     1381 tcttcatgat tacgggcttc cacggcaccc acgtgacgat cggcgtgatc ttcctgctca
     1441 tcattgcgcg gaaggtctgg cggggcgact tcgaccgcgg cgagcgcggc ttcttcacga
     1501 gccggaaggg ccgctacgag atcgtcgaga ccatgggcct ctactggcac ttcgtcgacc
     1561 tggtgtgggt cttcatcttc gcgttcttct atctctggtg agagcacgac atggcacagg
     1621 cagaagcaca tgtggaggca ggcgctcacc cgccggcgg
//
LOCUS       DASRPQ010001519         1619 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3938715, whole genome shotgun sequence.
ACCESSION   DASRPQ010001519 DASRPQ010000000
VERSION     DASRPQ010001519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3938715"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="VFD73_17310"
     CDS             complement(<1..363)
                     /locus_tag="VFD73_17310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75742.1"
                     /translation="MKTALLLPLLASLGASPASSLLAASSTPSPSPRPVLLVIANQDF
                     FYREYSETRRSLEASGLAVQVAAPTTLRCTPAPGTGQPAGGDGGVTPNLTVARARASD
                     YSAIVFVGGWGSSMYQYAF"
     gene            638..1576
                     /locus_tag="VFD73_17315"
     CDS             638..1576
                     /locus_tag="VFD73_17315"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HZI75743.1"
                     /translation="MKNKERRSHRGLDPSALNLSSMPFAAGQVTTETSAALLRELVAH
                     LRQNRTQLREEWARRITEAQLLTAMSKEEIFTEATSVYDNYVEVLETGSVEALQAYAR
                     NLSERIIPRGVETNEVVGIVLLLRDVLARSLFKKYQADFELLNRVLDAYEPAANRIAN
                     TVAVSFVQERERVIRQQQEAIRELSTPVLQVRERLLILPIIGVIDSQRARQLTEQLLR
                     GIRNNRAKVVVVDITGVPTIDSTVANHLVQTVEASRLMGASVIITGLSSEIALTLVTI
                     GLDLSKMNAVGDLQGGIEEAERLLGYEVTRTGETGG"
BASE COUNT          308 a          506 c          529 g          276 t
ORIGIN      
        1 gaaggcgtat tgatacatgg atgagcccca gcctcccaca aagacgatgg cggaatagtc
       61 gctggcacgg gctcgggcca ccgtcagatt gggggtcacg ccgccgtccc cgccggcagg
      121 ctggccggtg cccggggccg gggtgcagcg cagggtcgtg ggggcggcga cctggacagc
      181 cagaccggag gcttcgagcg acctccgggt ctcgctgtat tcccggtaaa agaagtcctg
      241 gttagcgatg accaggagca ccggtctggg ggacgggctg ggggttgaac ttgcggccag
      301 gaggctggag gccgggctgg cgcccaggga ggccaggagg ggcaggagca gtgcggtttt
      361 catttgggtc tctaatccat tcaatgttgg tgtttccgtc gcgtcccggc gtcgccgggg
      421 ccgctcaccg atcaatgaag cattttgggc gaactctaac ggggggggct ccaaacgatc
      481 cgtccgcggc ggcggcccgc ccaagatagc ccattgtcag aatggggtat tcacctactg
      541 tgaacctgcg gtgctcaccc catacttggg ttggatcaac cgccaaagcg cccattgaat
      601 tactgatatt tcaccgactg tctcacttga tgtagccatg aaaaacaaag aaagaaggag
      661 ccaccggggc ctcgatccgt ccgcgctgaa tctcagctcc atgccgttcg ccgccggcca
      721 ggtgaccaca gaaaccagcg ccgcgctcct gcgggaactg gtggcgcacc tgcggcagaa
      781 ccgcacccaa ctgcgcgagg agtgggcccg gcgcatcacc gaggcgcagc tgctcacggc
      841 catgagcaag gaggagatct tcacggaggc gacgtcggtg tatgacaact acgtcgaggt
      901 gcttgagacc ggcagcgtgg aggccctgca agcctacgcc cgcaacctgt ccgaacgcat
      961 cattccgcgc ggcgttgaga ccaacgaggt ggtcggcatc gtcctgctgc tgcgcgacgt
     1021 tcttgcccgt tcgctgttca aaaaatacca ggcggacttt gagctgctga accgggtgct
     1081 cgacgcctac gagccggcgg ccaaccgcat cgccaatacc gtggcggtga gcttcgtgca
     1141 ggaacgcgag cgcgtcatcc gccagcagca ggaagccatc cgcgagctgt ccacgcccgt
     1201 gctccaggtg cgcgagcggc tgctgatcct tccgatcatc ggcgtgatcg attcgcagcg
     1261 cgcccggcag ctgaccgaac agctgctgcg cggcattcgc aacaaccgcg ccaaggtcgt
     1321 cgtggtcgac atcaccggcg tgccgaccat cgattccacc gtggccaacc atctggtcca
     1381 gaccgtcgag gcgtcgcgcc tgatgggcgc cagcgtcatc atcaccggcc tgtcttcgga
     1441 gatcgcgctc accctggtga cgatcgggct ggacctctcc aagatgaacg ccgtcggtga
     1501 cctacaaggt ggtatcgaag aagccgaacg tctgctgggc tacgaggtca ctcgcaccgg
     1561 cgaaacgggc gggtaacggt acgtcttgaa gcttctgcaa gctaacacgg gcgtgccat
//
LOCUS       DASRPQ010001520         2597 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1447765, whole genome shotgun sequence.
ACCESSION   DASRPQ010001520 DASRPQ010000000
VERSION     DASRPQ010001520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2597
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1447765"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1769)
                     /gene="asnB"
                     /locus_tag="VFD73_17320"
     CDS             complement(<1..1769)
                     /gene="asnB"
                     /locus_tag="VFD73_17320"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HZI75744.1"
                     /translation="MCGIVGIVHLEPRPVELPVLSQMAAVLQHRGPDDEGSFVDRSVG
                     LYHKRLSIIDLASGQQPMTSDGVTVVLNGEIYNYLELKSELVRRGHSFRTTSDTEVLL
                     RMYLEYGPDCVKSLNGMFAFLIYDARRQQLMAARDHFGIKPLYYYADSSRLLFASEIK
                     ALLQHPDVGTEVDFDSLRDYITFQFVLGDRTLFKDIRKLTPGQYFLIDLKQRRYRSVQ
                     YWEPSYAIDLDHTPQYFVQELRHLLEDAVRLQLRSDVPLGTYLSGGMDSTIITALAAS
                     QSSGTLQTFTGTFREGLQFDETSYAREVSNLYRTERHEVVCTAQHLIELLPLLIYHMD
                     EPAAGPGLLPQYIVSRLASTRVKVVLGGQGGDEIFGGYARYQVAYLEQALKGAIFETT
                     EEGKHIVSLSSIIHHLPTLRAYGPMIQQFWRQGVFEPMDRRYFDLINRSGGVLACFSR
                     DFRASYHQEEIFARFQKIFNHPDTLSYYNKMTHFDLVAGLPALLQVEDRVSMAVSLES
                     RVPLLDYRIVDLMGRMTPAMKFKGGELKHVLKKAAKDLVPAKVRARKDKMGFPVPIHV
                     WARGPARDFFHDVLLSPTARTRGL"
     gene            complement(1754..>2597)
                     /locus_tag="VFD73_17325"
     CDS             complement(1754..>2597)
                     /locus_tag="VFD73_17325"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HZI75745.1"
                     /translation="WDAANPANAPLLRRIVEQGHEIGNHSFEHEPWLHRYSRSQLEAE
                     VVRTQDAIAQSTGQQPIGFRGPGYSWCPELLELLEQHGYLYDASTLPTFLGPLARRYY
                     FWTSRLSPEERAVRSALFGSFRDGFRPVRPYSWSLSHGRTLLEMPVTTFPVLKLPFHF
                     SYLNYIGRWSEAMALAYLRAGVAACRLTGTSPSFILHPLDLVGGDQVADLAFFPAMDR
                     ASDRKLDLFARVLSTYQERFVLVPMRDHARALLATGSLGRRSPGTLPLSSPLLEGERQ
                     CAAS"
BASE COUNT          538 a          758 c          841 g          460 t
ORIGIN      
        1 agtccgcggg tccgggcggt tggagacaag agaacgtcat ggaaaaaatc gcgcgctggt
       61 ccgcgggccc acacatggat tggaacgggg aagcccatct tgtcctttcg cgcccgaacc
      121 ttggccggca cgagatcttt cgctgccttc ttgaggacgt gcttcagttc gccgcccttg
      181 aacttcatcg ccggggtcat gcgtcccatc aggtcgacga tgcggtagtc gaggagaggc
      241 acccgggatt cgagcgagac cgccatgctc actcgatctt cgacttggag gagcgccggc
      301 agcccggcga ccagatcgaa gtgagtcatt ttgttgtagt acgacagggt gtcgggatga
      361 ttgaagatct tctggaaccg ggcgaagatt tcctcctggt ggtaactcgc ccggaagtcc
      421 cggctgaagc aggccaggac cccaccgctc cgattgatca gatcgaaata ccgacggtcc
      481 atcggctcga agacaccttg acgccagaac tgctgaatca tcggcccata ggcccggagc
      541 gtgggcagat ggtgaatgat cgagctcagc gagacgatgt gcttgccttc ttccgtggtc
      601 tcgaagatcg cccccttcag ggcctgttcc agataggcaa cctgataacg agcgtacccg
      661 ccgaagatct catcgccccc ctggccgccg agcacgacct tgacccgagt ggaggccagg
      721 cgggagacga tgtattgcgg cagcaggccg gggccggcgg cgggctcgtc catgtggtag
      781 atcaggagcg gcaggagctc gatcaagtgc tgcgcggtac agaccacctc gtggcgctca
      841 gtccgataca gattggagac ttcgcgcgcg taggaggtct cgtcgaactg gagtccctcg
      901 cggaaagttc cggtgaaggt ctgcagcgta ccggacgatt gggatgcggc cagcgcggtg
      961 atgatcgtgg aatccattcc accgctgaga taggtgccca gagggacatc gctccggagc
     1021 tgaagccgca ccgcgtcctc gagcaggtgc cgcaactcct gcacgaagta ctggggtgtg
     1081 tgatcgaggt cgatcgcata gctcggctcc cagtactgaa cgctccggta tcgccgctgc
     1141 ttcaggtcga tgaggaagta ctgacccggc gtcagcttcc ggatgtcctt gaagagagtg
     1201 cggtcgccca gaacgaactg gaaggtgatg tagtcgcgaa gcgaatcgaa atcgacttcc
     1261 gtccccacat ccgggtgctg aagcagcgcc ttgatctcgg aggcgaagag gaggcgagac
     1321 gaatcagcgt agtaatagag cggcttgatg ccaaagtggt cacgggcggc catgagctgc
     1381 tgacggcgcg cgtcatagat caaaaacgcg aacatgccgt tgagagattt gacgcagtcc
     1441 ggcccatact ccagatacat ccgtagcagc acttcggtgt ccgatgtggt gcgaaagcta
     1501 tgcccgcggc gaacgagctc gctcttcagc tccagatagt tgtagatctc gccgttgagg
     1561 acgacggtga cgccgtcgct cgtcatcggc tgctgcccgg aggcgagatc gatgatggag
     1621 agccgcttgt gatagagtcc gaccgaccga tcgacgaagc tcccctcgtc gtcggggccg
     1681 cgatgctgca ggaccgccgc catttgcgac aacaccggaa gctctactgg acgaggctcc
     1741 aggtgtacga tgcctacgat gccgcacatt ggcgttcccc ttccaatagt ggcgacgaca
     1801 atggcagcgt ccccggcgaa cgccggccca gcgatccggt tgccaggagg gctcgggcgt
     1861 ggtcccgcat cggcaccagg acaaaccgct cctggtaggt cgaaaggact cgggcaaaca
     1921 gatcgagctt ccgatcggaa gcacggtcca tggcaggaaa gaatgccagg tcggcgactt
     1981 gatctccgcc gaccagatcc aacggatgga ggatgaagct gggtgaggtt ccggtcagcc
     2041 ggcaggctgc caccccggct cgcagatatg ccagtgccat cgcttcggac caccgcccga
     2101 tgtagttcag gtagctgaaa tggaacggca gcttgagcac cgggaaggtg gtcaccggca
     2161 tctccagcag cgtccgcccg tgggagagcg accacgagta gggacgaacc ggccggaatc
     2221 catctcgaaa gctgccaaac agagcactgc ggacggctcg ctcttccgga ctcagccgag
     2281 aggtccagaa gtagtagcgg cgcgcaagtg ggccgagaaa ggtgggcagg gtcgaggcat
     2341 catacagata gccgtgctgt tccagaagct cgagcagctc gggacaccag ctatagccag
     2401 gacctctgaa cccgatcggt tgctgaccgg tggactgggc aatggcatcc tgggtgcgga
     2461 ccacctcggc ctcgagttga gaccggctgt agcggtgcag ccatggctcg tgctcaaacg
     2521 agtgattccc aatttcgtgg ccctgctcga caatacgccg caacagcggc gcattggctg
     2581 ggttggccgc atcccag
//
LOCUS       DASRPQ010001521         1466 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_484636, whole genome shotgun sequence.
ACCESSION   DASRPQ010001521 DASRPQ010000000
VERSION     DASRPQ010001521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1466
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_484636"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..410)
                     /locus_tag="VFD73_17330"
     CDS             complement(<1..410)
                     /locus_tag="VFD73_17330"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI75746.1"
                     /translation="MADDEPIGRQRLIRLLQAEPDTEVVAACADGEEAVEAIREHLPD
                     VVLLDIQMPQLDGFEVVAALGEAQQPSVIFVTAHDQYALRAFEARAFDYLLKPVEADR
                     LRLAMDRATSTQQRSAQGNVTRRILTLLEEINAR"
     gene            complement(425..>1466)
                     /locus_tag="VFD73_17335"
     CDS             complement(425..>1466)
                     /locus_tag="VFD73_17335"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HZI75747.1"
                     /translation="LVYESEATTRAGHGFGRVVVYSIGTAWIWALLTPGVLRVTRAAS
                     LALDSWTRALLLYLAGAAGFFLASGVLEWTLGVATGMTRPDQFWATLLTECVDTRLLA
                     YLAIVMLGWSAQYFTLYRTRHLDASELETRLAKTHLQVLKMQLQPHFLFNTLNAIAEL
                     VHTDPEAADLMITRLGRLLRLSLDHAGHQVVQLRQEAGFLRVYIEIEQVRFQDRLEIV
                     WDLASDTLDASVPTLLLQPLLENAIRHGVTPMMGRGRIVIASRREGEDLVLEVRDNGR
                     GLPTGAAVREGVGLRNIQERLQQLYGKAGRFGLIPALGGGTLAILRLPFTPCEHVHTP
                     VPLPTSIRELVR"
BASE COUNT          284 a          467 c          467 g          248 t
ORIGIN      
        1 tctcgagcgt tgatctcttc caagagggtg agaatccgtc gggtgacgtt accctgggcc
       61 gagcgctgct gggtgctggt ggcgcggtcc atcgcgagcc gaagccgatc ggcttccacc
      121 ggcttcaaca ggtaatcgaa agcgcgggcc tcgaatgcgc ggagcgcgta ctggtcatgc
      181 gcggtgacga aaataacgga cggttgctgc gcctcgccca gcgcggcgac gacctcgaag
      241 ccgtcgagct gcggcatttg aatgtccagc agcacgacgt ccgggaggtg ctcgcgaatt
      301 gcctccaccg cttcttctcc atcagcgcag gccgcaacga cttctgtgtc gggctccgcc
      361 tgcagcaacc ggatgaggcg ttgccggccg atcggctcgt cgtcggccac tacgactcga
      421 acagtcatcg taccagctcc cggatggagg tgggcagggg aacaggagtg tggacgtgct
      481 cacacggggt gaacggcagg cggagaatcg ccagcgtccc gcccccgagc gcggggatta
      541 ggccgaagcg ccctgccttc ccgtacagtt gctgcagtcg ctcctggata tttctcagac
      601 cgacgccttc tcgaaccgct gcaccggtgg gaagacctcg gccattgtcg cggacctcaa
      661 gcacgagatc ttcaccttcc cgccgcgagg caatcacaat tctgccgcgc cccatcatcg
      721 gcgtgacccc gtgacggatg gcgttctcca acagcggctg cagcagaaga gtgggtaccg
      781 atgcatccag ggtatcggac gcgaggtccc acacgatctc gagccggtcc tggaaccgta
      841 cttgctcgat ctcgatgtag acccgcagga atcccgcttc ttgccggagc tgtaccacct
      901 gatgaccggc gtgatcgagc gacagccgca agagacggcc gagtcgcgtg atcatcagat
      961 cggcggcctc cggatcggtg tgcaccagtt cggcgatggc gttgagggta ttgaacagga
     1021 agtgaggctg cagctgcatc ttcagaacct ggaggtgagt cttggccaag cgagtctcca
     1081 gctccgaggc atccaggtgc cgagtgcggt acagcgtgaa gtattgcgcc gaccacccca
     1141 gcatcacgat ggccagatac gccagcagcc gggtgtcgac gcattcggta aggagcgtgg
     1201 cccagaactg gtcgggacgg gtcatcccgg tcgccactcc gagcgtccac tccagaactc
     1261 ctgacgccag gaaaaagccc gcggcaccgg caaggtagag cagcagagcg cgggtccagg
     1321 agtcgagcgc cagactcgcc gcgcgagtta cccgaagaac gccaggtgtc agcagcgccc
     1381 aaatccaggc ggtaccgatg ctgtaaacca cgacacggcc gaacccgtgt ccagctctcg
     1441 tcgtcgcttc gctctcgtat acgagc
//
LOCUS       DASRPQ010001522         1101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1447800, whole genome shotgun sequence.
ACCESSION   DASRPQ010001522 DASRPQ010000000
VERSION     DASRPQ010001522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1447800"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(885..>1101)
                     /locus_tag="VFD73_17340"
     CDS             complement(885..>1101)
                     /locus_tag="VFD73_17340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75748.1"
                     /translation="YAPADASRVTIRMPGGQQYSSSTRPGWPGSGISFWGPVGPVNRN
                     PGAIDTIVITYDAAGHILQEVPLIFLG"
BASE COUNT          206 a          352 c          358 g          185 t
ORIGIN      
        1 ccgacgacgg gcactcatgg atcctccgcc tgggccatga gcggcccggc cccggccagg
       61 tcatcgatga caagctcgac gccgctcccg accctccagg ccggtggtac cgtccttctc
      121 gctgctcgat tgtcccggcc acggcccgag ggatggcagc tatcggggag gacgggggag
      181 ggctagggcg cagtcatcag cacaggccag accgcagtcg gccgtgccat tagccccggt
      241 aacgaggggt gtctcatggt cactcgcgga caaccccgca gcgcaggtca ggccgcacaa
      301 cagcgtggat cgcgcagatt cccaagctga tagtccgact tctgacccga tcctgcttct
      361 gacccgatcc tggccacgtg ggacatacat gggatgcagc gcagccgttg gtaaggccac
      421 aagcctcgcc gcaggtcaca ggcctgagac caactaagcc gtggcggttt ttaaaaccgt
      481 gcgctcaatg tggcgggctc gcgtacccgg atgcggtgct taagtgacgc tacgcatgtc
      541 ggtgtgacaa cgcacagtag caggatggca gggacgcagg agcctcgggc gtggaccggt
      601 tcgtggaccg ggtcaccgga taattccagc gccgcgagtg ctgtcaatgc gatgatccgt
      661 gtcatctgtg cagctagcgg acacggtgtt cgaggccgga cttcttgtaa acggcaggtc
      721 agcggttcga gccccacacc ggctcccaga tcagaagcgg taagcacccc accaagacac
      781 gctccgtggg acgaatgtcc ccgcgaagag tgcaggaggc ggatttggtc aataccgcgg
      841 cgcgcttccc gatcagcagg actcgtcccc gtgattgagg ggggctagcc gaggaagatc
      901 aatggcacct cctgcaggat gtgccctgcc gcgtcatagg tgatcacgat ggtgtcgatg
      961 gctcccggat tccggttaac cggccccacc ggtccccaga agctaatgcc gcttccgggc
     1021 cagcctggcc gcgtggacga agagtattgc tggccgcctg gcatccggat cgtcacccgc
     1081 gaggcgtccg ctggcgcata c
//
LOCUS       DASRPQ010001523         1145 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3343070, whole genome shotgun sequence.
ACCESSION   DASRPQ010001523 DASRPQ010000000
VERSION     DASRPQ010001523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3343070"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(92..>1145)
                     /locus_tag="VFD73_17345"
     CDS             complement(92..>1145)
                     /locus_tag="VFD73_17345"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HZI75749.1"
                     /translation="EDADLHRDVQKEKGDSAKYADAWKTGGGGVWTTPAYDKDLNLIF
                     VSVGNPSPDLDGSVRPGDNLYTDAIVAIDATSGKTKWYYQTVPHDVWDLDATSPPLVT
                     TLGGKKVVVHAGKTAWVYVLDAATGKLIRKTENFTPQENMFALPTEKGTRMLPGANGG
                     SEWSPMSVDPNLGYGFVAGLHQPMNYITHSAPLEKGKLWLGSAFVAIPGEEQYGLFSA
                     VDLKTGKIAWQNKVPQPMMGGSLATAGGLTFTGEGNGNFNAYNSRTGKLLWQFNAGAG
                     CNSAPMTFTHGGEQFIAVACGGNFQISYPLGDAVFVFGLPGKPLPTTQRGETPNKGRA
                     PMMKKKTGADTTGNKP"
BASE COUNT          192 a          355 c          369 g          229 t
ORIGIN      
        1 aggaggatgg gaaccgccag cactgccgac caactccagc gccacgcatt cataccgcag
       61 gccagcaggg ggcctgcagg ccccccattc attacggctt gttgccggtg gtgtccgcgc
      121 cagtcttctt cttcatcatc ggcgcacgac ccttattcgg ggtctcgcct cgctgagtgg
      181 tcggcagagg cttgccaggc aatccgaaga cgaataccgc atctcccagc ggatagctga
      241 tctggaagtt gccgccgcag gcgacagcga tgaactgttc gcctccgtgc gtgaacgtca
      301 tcggagcgga gttgcatcct gcgccggcgt taaactgcca gaggagcttc ccggtcctgg
      361 agttgtaggc gttgaagttg ccgttgcctt cgccggtgaa ggtgaggccg ccggcggtgg
      421 ccagggagcc gcccatcata ggctggggca ccttgttctg ccacgcgatc ttgccggtct
      481 tgaggtcgac ggcggagaag aggccgtact gctcctcacc cgggatggcg acgaaggccg
      541 aaccgagcca gagcttgccc ttctccaacg gagcgctgtg ggtgatgtag ttcatgggct
      601 ggtgcagccc ggccacgaag ccgtagccga ggttggggtc aaccgacatg ggggaccact
      661 cggagcctcc gttggcgccg ggcagcatgc gggtgccctt ctcggttggc agggcgaaca
      721 tgttctcctg cggagtaaag ttctcggtct tgcggatcag cttgccggtg gccgcgtcga
      781 gcacatacac ccaggcggtc ttgcctgcgt gcactacgac cttcttgcca cccagagtag
      841 tgaccagcgg cggcgaagta gcgtccagat cccacacgtc gtggggaacg gtctggtagt
      901 accacttggt cttgccgctg gtggcatcga tcgccacgat ggcgtcggtg tacagattgt
      961 cacccggccg cacgctgcca tcgaggtccg gcgacgggtt gccaacggaa acgaagatca
     1021 ggttgaggtc cttgtcatag gccggcgtcg tccagacacc gccgccgccg gtcttccagg
     1081 cgtcggcata tttcgcgcta tctccctttt ccttttgaac gtcccgatgc agatcggcat
     1141 cctct
//
LOCUS       DASRPQ010001524         2366 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1109822, whole genome shotgun sequence.
ACCESSION   DASRPQ010001524 DASRPQ010000000
VERSION     DASRPQ010001524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1109822"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..221
                     /locus_tag="VFD73_17350"
     CDS             <1..221
                     /locus_tag="VFD73_17350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75750.1"
                     /translation="DLAVLSDKFLEEPGRFSDHATMQTLADLIACCRAHLQEQAMTLG
                     HQLYAAKPRLFVDRLRESWRAWHGKPRR"
     gene            complement(419..1648)
                     /locus_tag="VFD73_17355"
                     /pseudo
     CDS             complement(419..1648)
                     /locus_tag="VFD73_17355"
                     /inference="COORDINATES: protein motif:HMM:NF016847.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(1803..>2366)
                     /locus_tag="VFD73_17360"
     CDS             complement(1803..>2366)
                     /locus_tag="VFD73_17360"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HZI75751.1"
                     /translation="GGLLLHFSFLAGGAPAAGWFSYTPLSETPFSSTTSTDYWALSLL
                     VLGIGSLAASVNLVATVLTLRAPGMTIRRLPLFVWMVLVNSVLILLALPVLNADLVML
                     LIDRQLQAQFFLPYGGGSPILWQHYFWAFGHPEVYIMILPAFGMISEIIPVFSRKPIF
                     GYGFVAASTVAIAALSLGVWAHHMFIA"
BASE COUNT          485 a          751 c          708 g          422 t
ORIGIN      
        1 atgacctcgc cgtgctatcg gacaagtttc tcgaagaacc gggcagattc tcagatcacg
       61 ccacgatgca gacgctcgcg gacctcattg cctgctgtcg tgcgcacctc caggagcagg
      121 ccatgacact cggtcaccag ctctacgcag caaaaccgcg cctctttgtg gaccgcctcc
      181 gggagtcctg gcgcgcctgg catggcaagc cgcgcaggtg atgccgtcag gggtttgttc
      241 ggggtggcaa ctccgttgaa aatctcccct gacgatcagg ctgtcagggg gagttcgcga
      301 atgtcgatct gcagtcccaa gctctccagg cgccgcacat gatggcggat gaggtgctcc
      361 cggtgctgcg tatgcacaaa gcgccctacg ggcggacttg ggacacgtca gtcggtcttc
      421 acggcccagc gcgtgaggcc gttgaggcgt aggtacctcg tttgatgact tccccctcgt
      481 catagatcac gccatatttg ggatgccaga tccgccacac cgccatctca ctcccacagt
      541 acggacaccg gcacggatcg cgccccgtgc tctgctcgta ccgttgccgg tacgtcagcc
      601 gggcaataat cttcacggcc cctttgagca cgccttccac cttcgtcagc gcggcgtgga
      661 tcaccgcctt caccttggca aaggtcttcg tggcttgcac cccatagtag cggatgcgct
      721 tgaagccttt gggaaggacg tgttggacca tgcggccaat aaaggtctgc accggcaccg
      781 tttcgtgctc cgtccgatcg gtgcggtgcg agcggtaatg gtaggtcacc cgctccccat
      841 catagcgatc aatgcgccgc accgagatgg gcgggctcaa cacgtacttg gccacgtagc
      901 gggccacgct gtacgcctgc tccgggaggg cccctttttg gacgttggtc accaacccgt
      961 cgggatactt gcggaagcag gtatccactc atcgctccag ggcttcggtc ttcagcgtct
     1021 ggcgcagcgt ggtcagcaga tgccactgcc ccgtgcgccg cagcagcgca tagggcaagt
     1081 actgcaggtg ttcccaacgg tccgcgtggg cagcatagcc cccactcgtg gccaacacat
     1141 gcaggtgggg atggtactgc ccgttgcgcc cgtgggtgtg gaggatggtg atagagccgc
     1201 cttggagcgg ggtgccttgg acggtgctat agaaggcatc caaacactgg gcgccgcacc
     1261 gcatgaaggc cctgagcacg acggcggcgt tgtggtagaa gatcgtccgg aacatcgccg
     1321 gcacggtcag aatgatgtgc cgatagatga ccccctcatg tagcactttg ctgacctgac
     1381 tgacccagtt atcgggagag accttagcac atcgcaagca taaggaggat ttacaactca
     1441 tcgacaccac atgctccccc tgcccacaat gcaagcaacg gtacgccaca caccccattt
     1501 ttacggggtt cccacaggcg agcatcttgt ggacgagcgc atcgtaatac cggctctgat
     1561 agcgcggatg ggcttgctga aacgtctccc agtgctcggc aaaaatctgc tgaaagacac
     1621 tccacgcccg ggcgggtgcg agcagcatcg gcgtccaccg cgttaggagg ttgcggttgt
     1681 ggtgataccg tggttgtacc acggctcctc caccctgtcc acacctcctc agggggtaac
     1741 cggaacgcct cccccatcag ctccctaact acttacagat caatgggaaa aaatgcattt
     1801 tcctatgcta tgaacatatg gtgcgcccac acacccaggc tcagggccgc gatcgccacc
     1861 gtggaggcgg caacaaaccc gtagccgaag atgggcttgc gggaaaacac cgggatgatc
     1921 tcggagatca tgccgaacgc cggcaggatc atgatataca cctccggatg cccgaaggcc
     1981 cagaagtagt gctgccacag gatcggcgag ccgccgccgt acggcagaaa gaactgcgcc
     2041 tggagctgtc ggtcgatgag cagcatgacc aggtccgcat tcaggacggg caacgccagc
     2101 aggatgagga cagagttcac cagcaccatc cagacaaaca gcggcagacg gcggatggtc
     2161 atgcccgggg cccgcagcgt cagcaccgtc gccaccagat tgactgacgc cgcgagcgag
     2221 ccaatgccca gcaccagcaa ggacagggcc cagtaatccg tgctcgtggt ggacgaaaac
     2281 ggcgtctcgc tcagcggcgt gtaactgaac cacccggccg ccggcgcacc gccggccagg
     2341 aagctgaagt gcagcagcag cccgcc
//
LOCUS       DASRPQ010001525         5466 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_800418, whole genome shotgun sequence.
ACCESSION   DASRPQ010001525 DASRPQ010000000
VERSION     DASRPQ010001525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5466
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_800418"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..225
                     /locus_tag="VFD73_17365"
     CDS             <1..225
                     /locus_tag="VFD73_17365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75752.1"
                     /translation="AELYERAAQHARRLETIPAVERGDLRQRGSRITSWDTAVTVWRA
                     RRPLRHLMPSAAHRDRVPRETTRQAEVAPS"
     gene            222..983
                     /locus_tag="VFD73_17370"
     CDS             222..983
                     /locus_tag="VFD73_17370"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HZI75753.1"
                     /translation="MTPFALLIGLATQAPPLPATMTTEPYPFAVGEKLSYTAKLGMLT
                     LGSGTLEVAAMDTVRGVETFRLRFRLQGKTMFYSLDDALESWIASSDLTSRRFVQNFV
                     ENDRTTKRHYEIYPDSGFFREEGKETSPQPTPAEPLDDAAFFYFVRVTPLEVGKTYRF
                     DRYFRKDKNPVTIEVVKRESMELPDGAKVPCLVLHPTIDTKGLFSKRSETRIWLTDDA
                     RRLPVQIRTKFPFGTITLRLKEMVLPGTAASAMSR"
     gene            985..1932
                     /locus_tag="VFD73_17375"
     CDS             985..1932
                     /locus_tag="VFD73_17375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75754.1"
                     /translation="MRYREADLTRVTTKPIGDRQNKVDPRLLASPPQDDRSFTAFLDS
                     LPHVLAAEDLRRVIEAVARARQTRRGVILLIGGHVVKVGLGPLVRAWVERGIVTHIAL
                     NGAAAIHDFELAAYGGTSEDVESGLADGSFGMAEETGAEMNAAISSAAQAGQGLGEGL
                     ARALSTRRHLPGGSASILLAAHQHDVPVTVHPAIGAEIIHQHPSADGAAVGATGQRDF
                     RRLAGSIPDLDHGGVVLNWGSAVMMPEVFLKALTVARNTGAGRPTHFVAGDFDMQRHY
                     RPRVNVVQRPTQAGGSGFLLTGHHELLIPLLVWGVLEKL"
     gene            complement(1943..2158)
                     /locus_tag="VFD73_17380"
     CDS             complement(1943..2158)
                     /locus_tag="VFD73_17380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75755.1"
                     /translation="MIRRILGFALFAFVAMFLLKLLFGLFGLFLGLLGALLWFAFLGF
                     VIYMILKIFAPETAARVREMIAGSAGA"
     gene            2225..3331
                     /gene="thiO"
                     /locus_tag="VFD73_17385"
     CDS             2225..3331
                     /gene="thiO"
                     /locus_tag="VFD73_17385"
                     /EC_number="1.4.3.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016647 - oxidoreductase activity, acting
                     on the CH-NH group of donors, oxygen as acceptor [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine oxidase ThiO"
                     /protein_id="HZI75756.1"
                     /translation="MPPSWEVIVVGGGAIGAACARELALTGRRVLVLDAGGNVGQAWR
                     AAGGMLAPQIEADATDPLLKFGVEARDHYSVLAPGLRDTTGIDIGLWQEGIARVAVEP
                     ADAEVLRAKVAWQREQGYRCEWLAGAEVHRRWPWLSPVAGALWAPSDGALDPIRLVEA
                     LRQDAVRLGATLITDRVTHIERQGDLIRGVSSEVDHYAAPEVVIAAGAWSPLIQGLPR
                     SLPVEPVRGQMAALRWPPGVPPAIIYQKESYILARGSEAVLGSTMERVGFQPDVTPAG
                     LAQIFSATGLLAPALARSKIQRSWAGLRPMTPDALPIIGREPEVRGLWYATGHGRNGI
                     LLAGLTGKLLAKLIDGADSARELLFAVERFRDAK"
     gene            complement(3332..3952)
                     /locus_tag="VFD73_17390"
     CDS             complement(3332..3952)
                     /locus_tag="VFD73_17390"
                     /inference="COORDINATES: protein motif:HMM:NF018257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfocyanin-like copper-binding protein"
                     /protein_id="HZI75757.1"
                     /translation="MIKHSCCAAAVVTILLGSACSSSRQETPHLPAPEDSSSAASPAP
                     ATRSDPPRDTSPASTHPDWIKSDSAARHVTLSLETAVRPGSTMASINGYRNGEARVVV
                     PLGWTVTWNWRNADSSAAHSLVVMVQREKIPLDGGRPAFSNAMTRMVTQGLDSGQTDQ
                     STFLAEEAGWYWLLCGVPSHALNGEWLELRVDPDAKKPDLVVKNPS"
     gene            4103..>5466
                     /locus_tag="VFD73_17395"
     CDS             4103..>5466
                     /locus_tag="VFD73_17395"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HZI75758.1"
                     /translation="MAGLLSKERITAEPGFSRWLVPPAALAIHLSIGQAYAFSVFKLP
                     LTKVLGITQSTPEDWSQPQLAWIFTIAIVFLGLSAAVFGRWLEHAGPRKSGVVAACCW
                     GLGFFISALGVKVHSIWLLYLGYGVLGGCGLGLGYITPVSTLIKWFPDRRGMATGMAI
                     MGFGGGALIASPLSQLLLDHYKSATSVGVAESFMTLGILYLIAMLAGAFLFRVPAPGW
                     RPAGWQPATQQQRSLITRRHVHVDTAIRTVPFYLLWAVLFLNVTAGIGILEQASPMIQ
                     EMFKGQVKASAAAGFVGLLSLFNMAGRFGWSSLSDRIGRKPTYAVFFTLGPLLYITLP
                     HAGRIGSVALFVICAVLILTMYGGGFATVPAYLSDIFGTQYVGAIHGRLLTAWSAAGV
                     AGPVLVNYIRDYQIKHGVPPAESYDVTMYLMAGLLVIGFICNLAVRPVADRYYMTDDQ
                     LSAE"
BASE COUNT         1022 a         1684 c         1709 g         1051 t
ORIGIN      
        1 gcggaactgt acgagcgggc tgcccagcat gcccgccggc tggaaacgat cccagccgta
       61 gagcggggcg atcttcggca acgcgggagt cgcatcacct cctgggatac cgctgttacg
      121 gtctggagag cgcgacgtcc actgcggcac ctgatgccct cggccgcaca tcgggatcga
      181 gtgccccgcg agaccactcg ccaggccgag gttgcgccct cgtgactccg ttcgccctcc
      241 tgattgggct ggccacccag gctccccctc tcccggcaac aatgacaacg gagccgtatc
      301 cctttgccgt tggggaaaag ctctcgtata cagccaagct gggaatgctg acccttggct
      361 ccggtaccct cgaagtggca gcgatggaca ccgttcgagg cgtggaaact ttccgcctgc
      421 gtttccgact ccagggcaaa accatgtttt actcgctgga cgacgccctc gaatcgtgga
      481 tcgccagcag cgatcttacc tcacgacgat tcgttcagaa tttcgtggag aacgatcgga
      541 ccaccaagcg ccactacgag atctacccgg attccggctt cttccgcgag gagggaaagg
      601 aaaccagtcc acagcccact ccagccgagc cgctggatga tgccgccttt ttctatttcg
      661 tgcgggtgac gccgctcgag gtgggcaaga cctaccgatt cgaccgctac tttcgaaagg
      721 acaagaaccc ggtcacgatc gaggtggtca agcgggagag catggagctc cctgacggcg
      781 ccaaagtgcc gtgtcttgtg ctgcacccga ccattgatac caagggcctc ttctccaaac
      841 ggtcggagac cagaatctgg ctcaccgacg atgccagacg tcttccggtc cagattcgca
      901 ccaaatttcc ttttggcacc atcacacttc ggctcaagga gatggtgcta ccgggaaccg
      961 ctgcctccgc catgagccgt tgaggtgcgc taccgcgagg ctgacctgac tcgcgtcacc
     1021 acgaagccaa taggggaccg ccaaaacaaa gtcgatccgc gcctcctcgc ctcaccgccc
     1081 caagacgatc gctccttcac cgcatttctg gacagtctcc cccacgtgct cgccgccgaa
     1141 gacctgcgcc gcgtcatcga agccgtggct cgagcaagac agacccggcg cggggtcatc
     1201 ttgttgatcg ggggacacgt tgtcaaagtg gggctcggcc ctctggtgcg ggcctgggtc
     1261 gaacgaggca tcgtgaccca catagccctg aacggggctg ccgcgatcca cgatttcgag
     1321 ctcgccgcgt acggaggcac cagcgaagac gtggagagtg ggctcgccga cggcagcttc
     1381 ggaatggccg aggaaaccgg tgctgagatg aatgccgcca tcagctcggc ggcacaggct
     1441 ggacagggat tgggcgaggg actggcacgc gccctgtcca ctcgacggca cttgccgggc
     1501 ggcagtgcgt cgatcctgct ggcggcgcac caacatgacg tcccggtgac ggttcatccg
     1561 gcaataggag cggagatcat tcaccagcat ccgtcggcgg acggggccgc tgtcggagca
     1621 accggccagc gcgatttccg gcgcttggct ggttctattc cggacctgga ccacggaggt
     1681 gtagtgctaa actggggcag tgcggtgatg atgccggagg tatttctcaa ggcactgacg
     1741 gtggcccgga acaccggagc cggtcgcccg acccattttg tcgccggcga cttcgatatg
     1801 cagcggcact accggccccg ggtgaacgtg gttcagcgac ccactcaggc cggcgggtcg
     1861 ggattccttc tcaccggcca tcatgagctg ctgatcccac tactggtctg gggggtgctg
     1921 gagaagcttt aaccgctccg ctctatgctc cagccgagcc ggcgatcatc tcgcggactc
     1981 gggcggcggt ttccggagca aaaatcttga ggatcatata aatcacgaac cccaagaagg
     2041 caaaccagag tagcgctccg agtaagccca ggaaaagccc gaacagaccg aaaagcagct
     2101 tgagcaagaa catcgctaca aacgcaaaga gggcaaaccc caggattctg cgaatcatat
     2161 caggctcctc aacgagtcag gctgcagtac gccccgacgt ttcaaatagt ttcacgagat
     2221 aatcgtgccc cccagctggg aggtaatcgt ggtggggggt ggcgcaatag gcgccgcctg
     2281 cgcccgggag ctggcgttga ctggccggcg cgtactggta ctcgacgctg gcggaaacgt
     2341 cggtcaggct tggcgtgcgg caggcggcat gctggcgcca cagatagaag cggacgcaac
     2401 cgatcccctc ctgaagttcg gtgtcgaggc acgagaccac tattccgtcc tggcaccggg
     2461 cctccgcgat actaccggca tcgacattgg cctgtggcag gagggcatcg ccagagtcgc
     2521 ggtcgagccg gccgacgccg aggttctgcg agccaaggtc gcatggcagc gggagcaagg
     2581 ataccgctgc gagtggctcg ctggtgctga agtccatcgt cgttggcctt ggcttagtcc
     2641 ggtagccgga gccctctggg caccaagcga tggtgcgttg gatccgatcc gcctggttga
     2701 ggccctgcgt caggatgccg tccggctggg cgccacgctc atcactgacc gagtcaccca
     2761 cattgagcga cagggagacc tgatccgcgg agtgtccagc gaggtcgatc attatgcggc
     2821 acctgaggtc gtaatcgccg caggagcctg gtccccgctg atccagggcc ttccgcgatc
     2881 gcttccagtc gagccggtac ggggacaaat ggccgccctt cgctggccgc caggcgttcc
     2941 gccggcgatc atttatcaga aggaatcgta catcctggcg cgcgggagtg aagcagttct
     3001 tgggtccacc atggagcggg tgggatttca accggacgtc acccccgccg ggctcgcgca
     3061 aatattctcc gccaccggac tccttgctcc cgcgctggcc cgcagcaaaa tccagcggag
     3121 ctgggccggc ctgcgaccca tgactcccga tgccctccct atcatcggca gagagccgga
     3181 agtgagaggc ctctggtatg ccaccggcca cggaagaaac ggcatattgc tggccgggct
     3241 cactgggaaa ttgcttgcca aactgatcga cggagcagac tccgcacgag agcttctctt
     3301 tgctgtggag cgcttccgag atgcgaaatg atcagctcgg gttcttaacc acaagatctg
     3361 gtttcttggc atcgggatcg acccggagct ctaaccactc tccattcaaa gcgtggctgg
     3421 gtaccccgca gagcaaccaa taccaaccag cttcttccgc caggaacgtc gattgatcgg
     3481 tttgcccgct atcgagaccc tgagtgacca tccgcgtcat ggcgttgctg aacgcaggcc
     3541 gtccgccgtc cagaggaatt ttctcccgct gtaccatgac gaccagacta tgcgccgcgc
     3601 tggaatcggc atttcgccag ttccaggtga cggtccagcc aagggggacg actaccctcg
     3661 cttctccgtt tcggtagcca ttgatcgagg ccatcgtgct tccgggacgg accgccgtct
     3721 ccagtgaaag cgtcacgtgg cgggcggcgc tatcggactt gatccagtcg gggtgagtgg
     3781 aagcggggct cgtgtcccgc ggagggtcac ttcgggtggc tggcgccgga gaagcagcgc
     3841 tggaggagtc ctccggcgcc ggcaagtggg gcgtctcctg tctcgacgat gagcaggcgg
     3901 agcccaagag gatggtcacg acagcagcgg cacagcagct atgcttgatc ataagtgggt
     3961 tttccagcgg tctggcaccg atgtggtctc atctgtacct tgactagctc gcaaccgtca
     4021 gcccaggagc gcctgctccg ctccgagtca gtccaccagg aacgcagtcg cagcacgaga
     4081 aacctaacag aggagattcg cgatggcggg gctgctgtct aaggagcgaa tcacagccga
     4141 gccgggtttc agccgctggt tggtcccccc cgctgcactc gcgattcacc tgagcatcgg
     4201 ccaggcctac gcgttcagcg tcttcaagct cccacttacg aaagtgctcg gtatcaccca
     4261 gtcgacgccg gaagattggt cgcagcccca gctcgcctgg atctttacca tcgccatcgt
     4321 gtttctggga ctttccgctg ccgtcttcgg acgctggctg gagcatgccg gcccccgaaa
     4381 gagcggggta gttgcagcgt gttgctgggg gctgggcttt ttcatctcgg cactcggggt
     4441 aaaggtccac agcatctggc tgctctactt gggctatggc gtgcttggcg ggtgcggcct
     4501 ggggctggga tacatcactc cagtgtcgac gctcatcaag tggttccccg atcggcgagg
     4561 catggccact ggcatggcca ttatgggatt tggaggcgga gcgctgattg cgagtccgct
     4621 gtcacaattg ttgctcgacc attacaagtc ggcgacatcg gtcggggtgg cggagtcgtt
     4681 catgactctg ggaattctgt atctgatcgc catgctggcg ggagccttcc tgtttcgggt
     4741 accggcacct gggtggaggc ccgcgggctg gcagcctgcg actcagcagc aacgaagcct
     4801 gatcacccgt cgtcacgtgc acgtggacac tgccattcgg acggtgccgt tttatctgct
     4861 ctgggcagtg ctcttcctca acgtgaccgc tggcatcggc atcctggaac aagcctcgcc
     4921 gatgattcag gagatgttca aaggtcaggt gaaggcgagt gcggcggccg gattcgtcgg
     4981 gttgttaagc ctcttcaaca tggcgggacg atttggctgg tcttcgttgt cggatcgcat
     5041 cggccgaaaa cccacctacg ccgtgttctt tactctgggt ccgctgctct acatcaccct
     5101 gccgcacgcc gggcgaatcg gcagcgtggc cctgtttgtc atctgtgcag tgttgatcct
     5161 cacgatgtac ggcggaggct tcgcgaccgt tccggcatat ctctcggaca tcttcggaac
     5221 ccagtacgtc ggtgcgattc atggtcgact actgaccgcg tggtcggcgg cgggcgtggc
     5281 cgggccggtg ctggtgaact acatccggga ctatcagatc aagcacggcg tgccgccggc
     5341 ggaatcctat gacgtcacga tgtatctgat ggcgggattg ttggtcatcg gatttatctg
     5401 caatctggcc gtccggccgg tggcagacag gtattacatg accgacgatc agctgagcgc
     5461 agagtt
//
LOCUS       DASRPQ010001526         2194 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_186056, whole genome shotgun sequence.
ACCESSION   DASRPQ010001526 DASRPQ010000000
VERSION     DASRPQ010001526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186056"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..704)
                     /locus_tag="VFD73_17400"
     CDS             complement(<1..704)
                     /locus_tag="VFD73_17400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75759.1"
                     /translation="MAQEPIFGLADTHLHLAAHVAFGGYGIWGAPHARDPTLSDDQAL
                     ADALAPCVPAHGRWGAVPSLEGVGRHATGGYPRFDGWPRHTTMAHQQAYVDWLRRAVD
                     GGLRLAVCLAVNNELLGRRMSSLRGQNPAVDDMSAIQRQLRAIESMVDFVDARCGGLG
                     RGWMEVAYSPADARRIAGEGRLAVVLGVEIDALGGWHTPHELERAAETAGVAPAGLIR
                     QLVQDLYDRGVRHVFPV"
     gene            1164..>2194
                     /locus_tag="VFD73_17405"
     CDS             1164..>2194
                     /locus_tag="VFD73_17405"
                     /inference="COORDINATES: protein motif:HMM:NF017539.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NACHT domain-containing protein"
                     /protein_id="HZI75760.1"
                     /translation="MLVNIASNDIAALQKWNWVIWPLILLLTALTLLMERERRTAVPL
                     AGSAVQATAERLEGLQRAHMIIRVRSSWITGVLGQSLHAAARAAVASPGRPLSAGQPV
                     SLWNLVYVQGETAETIAAQTPIVDIFERKVGGALLIEGGPGSGKTTLLLQLASDLLDL
                     AETEPVRPIPVIFKLASWTPSRSLHDWLVDELQKLYDVPPNLGRNLIESAQVIPLLDG
                     LDELRSENRARCVMAINSYRDQLGMQPLAVTIRSDDYKKLNPQLRVQGTIRMDPPNVS
                     QIAAYLDEVGIQDPHIQAALNKDPQKLASPLVLNIVALAYQRRSGTDLFTDDNPEAWR
                     PNLLRVYVD"
BASE COUNT          437 a          755 c          612 g          390 t
ORIGIN      
        1 accgggaaga catgccgtac gccccggtcg tacagatcct gcaccagctg ccgaatcaga
       61 ccggcaggcg ccacacccgc ggtctcggcc gcccgctcca gctcatgcgg ggtgtgccag
      121 ccaccgagtg cgtcaatctc gacaccgagc acgaccgcca gccgaccttc cccggcgatg
      181 cgccgggcat cggccggaga ataggccacc tccatccacc cacgtcctag gccgccgcaa
      241 cgggcgtcga cgaagtcgac catcgattcg attgccctca gctgccgctg gattgccgac
      301 atgtcgtcaa ctgccgggtt ttgtcctctt agagatgaca tacgccgacc tagcagctcg
      361 ttgttaactg ccaggcacac ggccagccga agaccaccgt cgaccgcgcg gcgcagccag
      421 tccacgtacg cctgttgatg ggccatcgtg gtgtgccggg gccagccatc gaaccgtgga
      481 tacccgccgg tcgcgtgccg gcccacgccc tccagcgaag gcactgctcc ccaccggcca
      541 tgcgccggca cgcatggcgc aagggcatcg gcgagcgcct gatcatcgct aagggtcgga
      601 tcgcgcgcat gcggtgctcc ccaaattcca tagccaccaa acgccacatg tgccgcgagg
      661 tgcaaatgcg tgtccgccag accgaaaatt ggctcttgcg ccactagacc cccctagcgc
      721 ccctgagggc aaccgcagct gcgatgccgc cgactcaccg cccggacatc ccaaccgcgc
      781 tgattgagag tcggggccac gaggcctagc cgaaaggcac gccagctccg cgggcccact
      841 caatcagcag cacaaatcag ttcaggccga gcatcggcgc ctctgcctgg ccgctgggag
      901 cgtcgtttcc gaccgggacc tccattgatc cgctgctagc taccgatcac gatgagtccc
      961 agcctcgttc acccgtaatc ccaagcggcg tgttgcggaa gatgatccat gtttcatggc
     1021 caaaagccct catagcttca cgctccatcg tcatggtaac atcatgtttc cctagacagt
     1081 tcaaccggtc atgacagatg ttccgccgaa acgccactct cgccaaggcc ttcatcgccg
     1141 cgctgtcggc gacggtgctg agcatgctgg tgaatatcgc gtcaaatgac atcgcggcgc
     1201 tgcagaaatg gaactgggtc atatggcccc tgatcctgct tcttaccgcc ctcaccctgc
     1261 tcatggaacg tgagcgcagg acggctgtgc cgctggcggg ctcggcagta caggccaccg
     1321 ccgaacgcct cgaaggcctt cagcgcgcac acatgatcat ccgcgtaagg agcagctgga
     1381 tcaccggtgt gcttggccag tcccttcacg cagctgcacg tgcagctgtc gcctcacccg
     1441 gccgtccact cagcgccggg cagccggtta gcctctggaa tctggtgtat gtccagggtg
     1501 agacagcaga aacaatcgca gcgcagaccc cgatcgttga tatcttcgag cgcaaagtcg
     1561 gtggggcgtt gctcatcgag ggaggtcctg gttccggaaa aaccacactc ctcctgcaac
     1621 tggccagtga cctcctcgat ttggctgaaa ccgagccggt tcgccccata ccggtgatct
     1681 tcaagctggc gtcgtggaca ccatcacgct cgctccatga ctggctggtc gatgaattgc
     1741 agaagctcta cgacgtgcca ccgaatctcg ggcggaactt gatcgaatcc gcacaagtca
     1801 ttccgttgct tgacggcctc gacgagctac ggtcagaaaa ccgcgcacgc tgtgttatgg
     1861 cgatcaactc ctaccgcgac cagctcggca tgcagccgct cgccgttact attcgcagcg
     1921 acgactacaa gaagctgaat ccccagctgc gagtgcaggg gaccatccgc atggatccgc
     1981 caaacgtgtc gcagatcgcc gcctacctgg acgaggtcgg cattcaagac ccacacatcc
     2041 aggcggcgct caacaaggat ccgcagaagc tggcctctcc acttgtgcta aacatcgtcg
     2101 cgctcgccta ccagcgacgt tcgggcacag acttgtttac cgatgacaat cctgaggctt
     2161 ggcgccctaa tctgctcagg gtttatgtag actg
//
LOCUS       DASRPQ010001527         1949 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2364398, whole genome shotgun sequence.
ACCESSION   DASRPQ010001527 DASRPQ010000000
VERSION     DASRPQ010001527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1949
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2364398"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="VFD73_17410"
     CDS             <1..440
                     /locus_tag="VFD73_17410"
                     /EC_number="1.14.19.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045300 - acyl-[acyl-carrier-protein]
                     desaturase activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-ACP desaturase"
                     /protein_id="HZI75761.1"
                     /translation="AQYEPGLGKVLSQVAKEEARHYTFYRTIFEEILKRDPDQALHSA
                     SFILPAIDMPGVTMPGFKDLADVIRRAGIYGPRDYLRIVQEQIRYWKIESLEGLNELG
                     RKAQEKIMGIPARLKRIAEHIETRSKSKTFSFEVVFNREFAME"
     gene            437..889
                     /locus_tag="VFD73_17415"
     CDS             437..889
                     /locus_tag="VFD73_17415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75762.1"
                     /translation="MTRGHLWRASLALALVVACKPANGSRSRHPPNLSQLTPEQRDVQ
                     LLGSEIFELVDRAVDYRGSHRGRPALNLRQMGVDSLTPTTVRRIVNVQRDPLVTVSFR
                     HPSGREIVSCRGDSKILEDASVNGRYTLMCTASSGAQHPMEVVTSGEP"
     gene            906..1484
                     /locus_tag="VFD73_17420"
     CDS             906..1484
                     /locus_tag="VFD73_17420"
                     /inference="COORDINATES: protein motif:HMM:NF014389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HZI75763.1"
                     /translation="MSIILLYTIVRTAVIVALAYAAVVAVTHWAVRNRRINPFGSWPR
                     FVRRVSDPLLQPLERRVISAGGNPQNTPLWLLVAVIASGLVLMSLAAWLVDAVVRLRW
                     MVESGPRMWLATLVSLTFTVLMAAILIRVIASWLGIGPYRRWMRPVMALTNWLIDPIR
                     RILPPFGMLDFSPMVAWLVLYVVRGFVMGLLL"
     regulatory      1581..1651
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00521"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00521"
     gene            1690..>1949
                     /locus_tag="VFD73_17425"
     CDS             1690..>1949
                     /locus_tag="VFD73_17425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HZI75764.1"
                     /translation="MTITAPASKAPDVQASRRAWRLGQLEQLLARRILVLDGAMGTMI
                     QSYQLGEQDYRGEQFRDWPRDLKGNNDLLSLTQPAIIRAIHAA"
BASE COUNT          357 a          593 c          604 g          395 t
ORIGIN      
        1 tcgcgcagta cgagccgggg ttagggaagg tgctgagtca ggtggcgaaa gaggaagccc
       61 gccactatac gttttaccgc acgatcttcg aagagattct gaagcgggat cccgaccagg
      121 cgctgcactc cgcatcgttt atcctgcctg ccatcgacat gcccggtgtc accatgccgg
      181 gcttcaagga cctggccgat gtgattcgcc gcgccggaat ttatgggccg agagactacc
      241 tccgcattgt tcaggaacag attcgctact ggaagatcga gagcctggag ggcctgaacg
      301 agctcgggcg caaggcgcag gagaagatca tggggatccc tgcccggctc aaacgcatcg
      361 cagaacacat cgagacccgg agcaagagca agacgttcag cttcgaagtg gtgttcaacc
      421 gcgaatttgc catggaatga cccgcggcca cctgtggcgc gccagcttgg cattggctct
      481 ggtcgtggct tgcaagccgg caaacggctc ccgctcgcgg catcctccca acctcagtca
      541 gctcacgccg gaacaacgcg acgtccaact cctcggcagc gaaatcttcg agctggtgga
      601 tcgagcggtt gattaccgtg gctcccatcg gggccggccg gcgctcaatc tgaggcagat
      661 gggagtggac agtctgaccc cgaccaccgt ccgtcgcatc gtgaacgtgc agcgggatcc
      721 gctcgtcacc gtcagcttcc ggcatccctc cgggcgagag atcgtctcct gtcgaggcga
      781 tagcaaaatt ctcgaggatg cgtcggtgaa cggccggtac accctgatgt gcaccgccag
      841 ctccggagct caacatccca tggaggtagt tacctcaggc gaaccctgag tcctgctgca
      901 gctccatgtc catcattctt ctgtacacca tcgttcgaac ggccgtgatc gtggcgctgg
      961 cctacgccgc ggtggtagcg gtcacccatt gggcggttcg aaatcgccgg ataaacccct
     1021 tcggatcctg gccgcgtttt gtccgccggg taagtgatcc cctgctgcag ccactcgagc
     1081 gcagggtcat ctcggcgggt ggaaacccgc agaacacccc tctgtggctc ttggtggcgg
     1141 tcatcgcaag cggtctggtg ctgatgagcc tggccgcctg gctggtggat gccgtggtgc
     1201 gcctccggtg gatggtcgag agcggtccgc gaatgtggct ggcaaccctg gtaagcctca
     1261 cgtttactgt gctcatggcc gcgatcctca tccgggtgat cgcgtcgtgg ctgggcatcg
     1321 ggccgtatcg ccgctggatg cgaccggtca tggcgctcac caactggttg atcgacccga
     1381 ttcgccgcat cctgcccccc ttcggcatgc tggatttcag ccccatggtc gcatggctgg
     1441 ttttgtatgt cgttcgaggg ttcgtcatgg gactgctgct atagggcgtc ccaactggcc
     1501 cattccgatc tcgacgatcc agacggttgg tgtcctaccc tagacgttgc tgcagcggtc
     1561 agttagtttc ccggtaggag agatgatgtc gtggcgattt gcgctgattg cggccacgtt
     1621 aaacaaactg ctaaaacgcg atacctgagg cgttttggcc tcgggttttt tgttaggaga
     1681 cctgccgaag tgaccataac cgcccccgct tccaaagccc cggacgttca ggctagccgc
     1741 cgcgcgtggc ggttgggaca gctggagcaa ctgcttgccc ggcggatact ggtgctggac
     1801 ggcgcaatgg gcaccatgat ccagagttac caactcggag agcaggacta ccgaggtgag
     1861 cagttccggg attggccccg tgatctcaag ggcaacaacg acctcctgtc gttgacccag
     1921 ccggcgatca tccgggcaat tcacgcggc
//
LOCUS       DASRPQ010001528         1174 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2720098, whole genome shotgun sequence.
ACCESSION   DASRPQ010001528 DASRPQ010000000
VERSION     DASRPQ010001528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1174
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2720098"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1050)
                     /locus_tag="VFD73_17430"
     CDS             complement(<1..1050)
                     /locus_tag="VFD73_17430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75765.1"
                     /translation="MSETRKLRIGILQDSSYASVYIRDLITWAQLQDDLEVSHLIVYA
                     TPGETKVAGWRRKWSHLKLKGFRVAVLRGIRLLEQAVLRRYYGGKHRDHLRQFPVGQQ
                     VPNVVHIQPTISKSGLVYRFSAEEVAKVRSLDCDVLIRGGVGILRGDILTASRFGILS
                     FHHGDNRVNRGGPAGFWESYYGWPATGFIIQRLTSELDGGDVLVRGSYATKWFFLFNQ
                     ASLLSNSNPHLMALLKRVARERALPSAEEPLPYSGTLFRTPSVLVCIAYLVRVADRLL
                     RKLGHGLFRYRERWSVSFTRGDWRQAAFWRATQVKTPARRFLADPFVWEHGGRTFCLV
                     EDYVYREHRAGISAFE"
BASE COUNT          248 a          395 c          335 g          196 t
ORIGIN      
        1 ctcgaacgcc gagatcccgg cccggtgctc ccggtacacg tagtcctcca ccagacagaa
       61 tgtccgacct ccatgttccc acacaaacgg gtctgccagg aagcgccggg cgggcgtctt
      121 gacctgggtt gcccgccaga atgcggcctg tctccaatcg ccgcgggtga aagacaccga
      181 ccagcgctcc cgatagcgaa agagaccatg acccagcttc cggagcagcc gatcagccac
      241 ccgcacgagg tacgcaatac agacgagaac cgagggggtg cgaaacagag ttcccgagta
      301 gggcaacggc tcctcagccg acggcagcgc tcgctctcgc gccacccgct tgagcagagc
      361 catcaggtga gggttggaat tcgagagcag cgatgcctgg ttgaacagga aaaaccattt
      421 ggtggcatat gatccccgaa ccaggacatc ccccccatcc agctccgacg tgagacgctg
      481 gatgatgaaa ccggtcgccg gccagccgta gtagctctcc cagaatcccg ccggcccccc
      541 acgattcacc cggttgtctc catggtgaaa cgagagaata ccgaaccggc tcgcggtcag
      601 gatgtcgcct cgaagaatgc cgacgccgcc tcgtatcagc acgtcgcagt ccagcgagcg
      661 taccttcgcg acctcttcgg cagagaaccg gtagaccaga ccggattttg aaatcgtggg
      721 ctgaatatgt acgacgttgg ggacctgctg acccaccgga aactgccgaa ggtggtcgcg
      781 gtgtttgccg ccgtaatacc tccggagcac cgcttgctcc agcagccgga taccccggag
      841 caccgcgacc cggaatccct tgagcttcag atggctccac ttgcggcgcc agccggccac
      901 cttggtttca cccggagtgg catagacgat cagatgactc acctccagat catcctgcag
      961 ctgggcccag gtgatcagat cccggatgta gacgctcgcg tacgaactgt cctgcaagat
     1021 tccaatgcgc agcttccgcg tttcactcat cgattgctcc catgaaccac ccccctcgaa
     1081 ctcggcccgg gctggatcgg ccgcccatgt cagttggtga gctgccggta cacgtcgagc
     1141 gttgcggcag cggcggagct ccaatcgaac accc
//
LOCUS       DASRPQ010001529         1074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_801250, whole genome shotgun sequence.
ACCESSION   DASRPQ010001529 DASRPQ010000000
VERSION     DASRPQ010001529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_801250"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(92..880)
                     /locus_tag="VFD73_17435"
     CDS             complement(92..880)
                     /locus_tag="VFD73_17435"
                     /inference="COORDINATES: protein motif:HMM:NF015921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75766.1"
                     /translation="MSEELEMDDGAPRVTHQGASKVPEVTLGFWIIKIAATTLGETGG
                     DWGTMSLNLGYLLGSIIFIGLFVGLVAAEIRAKTFHPALYWATIIATTILGTTMADFA
                     DRSLGVGYPGGVMIVLTLLIASLVLWHWVEGTVSVQSITTPRAEWFYWCTILFSQTLG
                     TALGDWTADSAGLGYLGAAAIFSALLLIILLLHFFSSMSKTALFWSAFVLTRPLGAVV
                     GDFLDKPVAQGGLELSRYVATGVLFVAIVILVLLLPQKAARSAH"
BASE COUNT          224 a          332 c          350 g          168 t
ORIGIN      
        1 acgatcttgc cggcgacgaa ggtgccgccc cagatcgcgg gcacggccac cagccgagcg
       61 aaatcggagg ggcgcgcacc cgacaggctc actagtgagc gctccgcgca gccttctgcg
      121 gcagcagcaa caccaggatc acgatggcga cgaacagcac gccggtcgcc acgtagcggc
      181 tcagttccaa tccgccttga gcgacaggct tgtcgagaaa atctccgacc accgcaccca
      241 gtgggcgcgt caggacgaat gccgaccaga aaagcgccgt cttcgacatg gacgagaaga
      301 agtgcagcag caggatgatg agcaacagcg cgctgaagat ggctgccgcc cccagatagc
      361 ccagccctgc ggagtcggct gtccagtcgc ccaaggccgt gcccagcgtc tgtgagaaca
      421 gaatggtgca ccagtagaac cattcggctc tgggggtcgt gatgctctgg accgagacgg
      481 tcccctcaac ccagtgccaa aggaccaagc tcgcgatcag cagcgtgagg acaatcatga
      541 ccccgccggg atagcccacg ccaagggagc gatcggcgaa gtcggccatg gtcgtgccga
      601 ggatcgtggt cgcaatgatc gtggcccaat acagggcggg gtggaatgtc ttggccctga
      661 tctcggctgc gacaaggcca acaaacaggc caatgaagat gatgctcccg agcaggtagc
      721 cgaggttgag gctcatggtg ccccaatcac cccctgtttc gccgagggtg gttgcggcga
      781 tcttgatgat ccaaaagccg agtgtgacct cggggacctt gctggccccc tggtgggtca
      841 ctcggggtgc gccatcgtcc atctcaagtt cctcgctcac gaaggttcgg gacgcgtgag
      901 aggctgcgtg gatcactggg ccgcgacggg gggcattctg ggcgtgtggg gctgttctgc
      961 ttccgcaaag gccaaggcaa ccgggtgggc agacacaagc aagccgggca catcagcgcc
     1021 tttccgtccg gtgatccgtg cgacgaaatc agccttggag cactccagtt ccgc
//
LOCUS       DASRPQ010001530         1818 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4571514, whole genome shotgun sequence.
ACCESSION   DASRPQ010001530 DASRPQ010000000
VERSION     DASRPQ010001530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1818)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1818)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4571514"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1240)
                     /locus_tag="VFD73_17440"
     CDS             complement(<1..1240)
                     /locus_tag="VFD73_17440"
                     /inference="COORDINATES: protein motif:HMM:NF024900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HZI75767.1"
                     /translation="MPSLTLNGTDVPFQPGQTILEAARTARVDIPTLCWYPKLPIVGN
                     CRICLVSVKGQNKLLPACATPAAEGMVVETESDAAVSNRRGVLDFLLERYPGEHLVSS
                     HHSNGGNGFPPAGNGNGARPAARNEFEEYVVRYEVSARPHHDLPLRSGDERPGDVMIQ
                     HDMTTCILCTRCVRACEDIQEVGVLEVGMRGEHAQIIVGGDGDPDHAGCTWCGECVRV
                     CPTGAIFEFIPRQRFGTEALRTPDKVARAVCPYCAVGCQLDLHVKDGALMRVTSPWIE
                     ESTPNQGSTCVKGRFGYDFPQHRDRLTTPLIRKGWMFQDDRWVWTGEWPRRREGPWLT
                     IEEMGERKKPRPPLRQIGKPPLTGVPRLDDDDVRDRVATPAGWYSAFREATWEEALSL
                     ASQEILRIRDQHGPRALGALS"
     gene            complement(1407..1577)
                     /locus_tag="VFD73_17445"
     CDS             complement(1407..1577)
                     /locus_tag="VFD73_17445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75768.1"
                     /translation="MTTLPLSTPLEPLGIVIKSGAPTPKPARFWAYMWAADEENGAQQ
                     HWHERVPTEHAA"
BASE COUNT          341 a          565 c          568 g          344 t
ORIGIN      
        1 aagagagcgc acccagggcg cgcgggccat gctgatcccg tatgcgcagg atttcctgcg
       61 atgccaggct cagggcttcc tcccaggttg cctcacggaa ggcgctgtac catcccgcgg
      121 gcgtggcaac gcgatcacgc acatcgtcat cgtccagccg aggaacaccg gtgagaggcg
      181 gcttgccgat ttgccgcagt ggcggccgag gcttcttgcg ctctcccatc tcctcgatag
      241 tgagccaggg accttcccgg cgtcggggcc actcgcccgt ccagacccag cgatcgtcct
      301 ggaacatcca gcccttgcgg atcaatggtg tcgtgagacg atcccgatgc tgaggaaagt
      361 cgtatccaaa gcgtcctttg acgcaggtgg aaccctgatt cggtgttgac tcctcgatcc
      421 agggagaagt caccctcatc agggctccat ctttcacatg cagatcgagt tgacagccga
      481 ccgcacagta ggggcagacg gcacgggcca ccttgtcggg cgtccgcaac gcttcggtcc
      541 cgaaccgctg ccgggggatg aactcgaaaa tcgcaccggt gggacagacc cggacacact
      601 cgccacacca ggtacacccg gcgtgatccg gatcgccgtc accacccacg atgatttgcg
      661 catgctcgcc ccgcattccg acctcgagca caccgacttc ctgaatatcc tcgcaggctc
      721 ggacacagcg ggtgcagagg atacaagtgg tcatgtcgtg ctgaatcatc acgtcacccg
      781 ggcgctcatc accgctgcgg agcgggaggt catgatgagg gcgggcggaa acctcataac
      841 gcacgacgta ttcctcgaac tcattgcggg ccgcgggtcg agcaccgttt ccatttccgg
      901 ccggcggaaa tccgttccct ccgttcgaat ggtgcgacga gaccaagtgc tcgccgggat
      961 agcgttccag caagaaatcg aggactccac gccggttgct cactgccgcg tcggattcag
     1021 tctccaccac catcccttcg gcagcgggag tggcgcacgc cgggagcagc ttgttttgtc
     1081 ccttcaccga gacgaggcaa atccggcagt tccccacgat cgggagcttg gggtaccagc
     1141 agagcgtagg gatatccacc ctagcggtcc gagctgcttc gaggatggtt tgtccgggtt
     1201 ggaaggggac gtcggtgccg ttcagggtca ggctaggcat ggctatccag tcaagggcgt
     1261 tcattcgagt ctagagggga aaataatggg gtgcaaggga tttcagcgtt gtggctggtc
     1321 cagtgcctag aagtacaaac acccccgagc cggagcccgg gggcgttttc cgccgcttcc
     1381 actagccggc gggagaagag aggatgctac gcggcgtgct ccgttggaac ccgttcgtgc
     1441 cagtgctgct gcgctccatt ctcttcatcc gcagcccaca tgtaggccca gaagcgcgcc
     1501 ggtttgggcg tgggtgcgcc gctcttgatg acaatcccta gcggttccag cggggtgctg
     1561 aggggaagag tggtcacgga cagtctcctc tatcaagggg aacggtcgag ttccctggaa
     1621 gcaccgtccg tgccgacttg gcgagttcga taggttattg ctgctgcaga acttcactag
     1681 cggtagcggc gagcccgtgt cgctccgacg cggagcatcc tggtctacgc cgtgtcctca
     1741 ggacacagag gcttggccag aatcaagccg ggtagggatt tccggtccgc aggccgacgc
     1801 cttcgcttta ccgactcc
//
LOCUS       DASRPQ010001531         1175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2991624, whole genome shotgun sequence.
ACCESSION   DASRPQ010001531 DASRPQ010000000
VERSION     DASRPQ010001531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2991624"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(251..352)
                     /locus_tag="VFD73_17450"
     CDS             complement(251..352)
                     /locus_tag="VFD73_17450"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75769.1"
                     /translation="MAQLRHKLERDPTGPQLLLTEPGIGYRLKSEVD"
     gene            complement(984..>1175)
                     /locus_tag="VFD73_17455"
     CDS             complement(984..>1175)
                     /locus_tag="VFD73_17455"
                     /inference="COORDINATES: protein motif:HMM:NF020397.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HZI75770.1"
                     /translation="YSSVVKLTFFKGAQLKDPKRLFNSSLEGNTRRAIDLHQGDRIDE
                     AAFQALIREAVALNESSAR"
BASE COUNT          226 a          352 c          386 g          211 t
ORIGIN      
        1 cttccttggc ggtgaacccg aacagccgct cggccccacg actccaccgg ctcacccggc
       61 catcgggatc gagcagaatg attccatagt cttcggtagt gctcaggaag aggtccagca
      121 gatcttgatg agacacacag ccaccaaggc aaagtgtgaa aacaccggcc tcaccgttct
      181 acatcactct atggttcgag ctcagcgatg gtcgcagtga cgagcgtcac caacggccga
      241 gtgcgggaga ctaatccacc tcgctcttga ggcggtagcc gattcccggc tcagtaagga
      301 ggagttgtgg gccggtcggg tcgcgttcca gcttgtgccg gagctgtgcc atgtagacgc
      361 gaagctaatg ggtctggtcg gcgtagttcg cgccccacac ttcatgcacc agctggcgat
      421 gggtcatcac ccggccggca tggcgaggag cttgtagtcg gtaggggtaa ggtgtagaag
      481 cgactgcgct gggcggggca agacgatgat gacgctgcca atcacggtgc gcgaggttgg
      541 aacgtgacta tctcagtggc aggagccgag tcattgcgag gccgcgtggg gtgatcggcg
      601 ctggtgctgc tcctccgggg gcgctgcagc actcgacggt cggagcccgt cggattccat
      661 cagcagaata gctccgacgc ccgaccgacg gtctcctccc ctcgtgctga cgcgcccctc
      721 cggagcagcc accagcgccg ggttcaggtt catcttgaga atgctcctcg gacctttgcc
      781 aggaagtggg ctgcgactgg cgatgtggct ccgaagagca cgtcagcacg aggggaggag
      841 accggggatc tggtcgcggc gttctgcgtc ccaacggtgc ccccgggctc cgaccgtcga
      901 gtgctgcagt gctcggagga gccacatgcc agtcgcaaaa tcctgcgaac taaacaagca
      961 attggaggag ccgagaacag tcactaccgc gccgaggact cgttcaaggc aacggcctcg
     1021 cggatgagcg cctggaacgc agcctcgtcg atccggtcgc cctggtgcag gtcgatggca
     1081 cgccgggtgt tgccctcgag actggagttg aacagccgct tcggatcctt gagctgcgca
     1141 cccttgaaga aggtcagctt gacgacgctg ctata
//
LOCUS       DASRPQ010001532         1930 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3940636, whole genome shotgun sequence.
ACCESSION   DASRPQ010001532 DASRPQ010000000
VERSION     DASRPQ010001532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3940636"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..434)
                     /locus_tag="VFD73_17460"
     CDS             complement(<1..434)
                     /locus_tag="VFD73_17460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75771.1"
                     /translation="MPGLSSHRAPGRTSEFAAREPTAPAEQPVQPTERPAQPSDLLAR
                     AAELRRLFTTFGYLVAKQGATAVLGLAYWAVATRLFSAEDVGLAAAASSTAFFLGAIG
                     AIGIPLLLLAELDSLPAAVRRVAFSTGMYISCLAVLILSLATL"
     gene            922..1845
                     /locus_tag="VFD73_17465"
     CDS             922..1845
                     /locus_tag="VFD73_17465"
                     /inference="COORDINATES: protein motif:HMM:NF012925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 16 glycosylhydrolase"
                     /protein_id="HZI75772.1"
                     /translation="MAHRHAPDHRLSRRSLLGWSAAATFAAAAGLFTAWATHDENAPR
                     RVLFEDVFAGNSLSRTHWNPYICDDNSHGWPWLMQPSVAVPSSATTQATTHRNGFNAA
                     YDLPSAIRVDDGLTLRSYRGTQATGYSWTGSVICSRPTSNNFGSGIVPTHGFTFADAR
                     VEVRAKMPDLTGGQWSSIWFLPAWDDQGAEIDLFEGGYLSETIHPNQLMAVHLQSSGN
                     QQQLLDCRTDLSADYHTYSMEYRQGSSIKIFFDGSNVCTYTRNVPVGHYCIILSNSIA
                     STHTAGWHTQASRSTPAVNLMRVSYVRVLAL"
BASE COUNT          356 a          656 c          581 g          337 t
ORIGIN      
        1 agcgtggcca acgacaggat caggacagcc agacacgata tgtacatccc cgtgctgaag
       61 gcgacccggc ggaccgcagc cggcagtgag tcgagttcgg ccagcaggag gagcgggatc
      121 ccgatagcgc cgatcgctcc gaggaagaat gccgtcgatg atgcggcggc cgccagaccc
      181 acatcttccg ccgagaacag acgcgtagcc acggcccagt aggcgaggcc cagtaccgcc
      241 gtggcaccct gcttggccac caggtagccg aaggtcgtga agagccgccg caactccgct
      301 gcccgcgcca acagatccga gggctgcgcc ggccgctccg tcggttgtac cggctgctct
      361 gccggagctg tcggctcccg agccgcgaac tcgctcgtgc gcccaggggc ccgatgggaa
      421 gagagtccgg gcatcctgcg ggccgggcgg gcagggcccc gcccgccctc agccgtccaa
      481 tggcggctga gcggacccca gctcttcacg ggtcgatcgt aacctcgggc cattctcctg
      541 ggattggccc cgagcgttca tgttcctgaa cgagttccat ttacctggga ggataaggtt
      601 agagtcctgg caggccgctg gcctgatcgc cacgaccctg ctggccgggt tcaggctgct
      661 cgccctggcc ccgcgccgag cagacctgcg ccaccgcgtc cttcacgcca ccgcctgctg
      721 acccgtagcg gttgccgggg gcgtctgccc atccaggcca gctgactctg ggctgctgac
      781 atgagctgta atgtaagaat taaggttgta ctgcagagga acggtcacct ggcgttcgcc
      841 ctgcgcgcct gatgcggtct tgctggacat ctccggcgag aaccgagaaa ggacaggcga
      901 atggggtccc cccaagactg cttggcgcac cgacacgcac ccgaccaccg gctgagccgc
      961 aggagcctgc tgggctggtc agccgccgca actttcgctg ccgcagcagg gctgttcacc
     1021 gcatgggcta ctcacgacga gaatgcccct cgccgcgtcc tcttcgagga cgtcttcgcc
     1081 gggaactcgc taagccggac tcactggaat ccctacatat gcgatgacaa ctcacacggc
     1141 tggccatggc tcatgcagcc gagcgttgcg gtgcccagtt cggcgaccac tcaggcgacc
     1201 actcatagga acggcttcaa cgccgcgtac gaccttccct cggccatccg cgtggacgat
     1261 ggtctgaccc tgaggtccta tcgcgggacc caggccaccg gatattcgtg gaccggctca
     1321 gtcatctgct cgcgtcccac cagcaataac ttcggctcgg gcattgtgcc cacacatggg
     1381 ttcaccttcg cggacgcgcg cgtggaggtc cgagccaaga tgccagacct gactggcggg
     1441 cagtggtcgt ccatttggtt cctgcctgcc tgggacgacc agggtgctga gatcgacctg
     1501 ttcgagggcg gctatctttc cgagacgatc caccccaacc agctcatggc ggtacacctg
     1561 caaagcagcg gcaaccagca gcaactcctg gactgccgca ctgacctgtc cgctgactat
     1621 cacacgtact cgatggaata ccggcagggc agttcgatta agatcttctt tgacggctcg
     1681 aacgtctgca cctacacgcg caacgtgccg gttggccatt actgcatcat cttgtccaac
     1741 agcatcgcat cgacgcatac ggccggctgg catacccagg ccagcagatc cacgccggca
     1801 gtcaacctga tgcgggtctc ttacgtgcgt gtcctggccc tgtagaaccg cggactagtc
     1861 ggctgctaca atgtcctgtc acttcctcct aaagacgcat agagcggtca tatgactaca
     1921 gctctcatca
//
LOCUS       DASRPQ010001533         1376 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_801775, whole genome shotgun sequence.
ACCESSION   DASRPQ010001533 DASRPQ010000000
VERSION     DASRPQ010001533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1376
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_801775"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..739)
                     /locus_tag="VFD73_17470"
     CDS             complement(<1..739)
                     /locus_tag="VFD73_17470"
                     /inference="COORDINATES: protein motif:HMM:NF018190.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate binding family 9 domain-containing
                     protein"
                     /protein_id="HZI75773.1"
                     /translation="MIQRGWVLLFFACLVARKPAAAQERLTATVIIGGVQIDGRLTES
                     FWESADSIWEFRQREPAQGAPCTERTVMKVARDRDALYVGVHAYDSDLRGIRATQLRR
                     DADLSVDDEITLLIDSFHDRRSGFVFSTNPNGAMWDAQLTGVDEVDENWNGIWDVAVV
                     RDTTGWTAEFRIPFRTLRFRSGGGSFGVNAQRFIRRKNEVALWRGWGRTEGLYRLIYE
                     GEVGGFEDLHRGRNLEIKPYALGRMTAS"
     gene            complement(736..957)
                     /locus_tag="VFD73_17475"
     CDS             complement(736..957)
                     /locus_tag="VFD73_17475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75774.1"
                     /translation="MIDSSAPPSPPRSRDTPPSSALPPLHQRGIIGATLSGLSFVLPS
                     LAIVVALAMTYFRCGRLPRMQAVGLAVRR"
     gene            1068..>1376
                     /locus_tag="VFD73_17480"
     CDS             1068..>1376
                     /locus_tag="VFD73_17480"
                     /inference="COORDINATES: protein motif:HMM:NF019127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1259 domain-containing protein"
                     /protein_id="HZI75775.1"
                     /translation="MRNTPRTLGVSRFGLGPFSLLVLVTWATPSTAQAPADWSKVAEA
                     LGKSGSVQPGDVYKVGLPRSDLHVTAGGVPVKPAFALGSWVAFKQAGPPGEAVAMGDL
                     V"
BASE COUNT          261 a          435 c          435 g          245 t
ORIGIN      
        1 cgctcgccgt catccgcccc agcgcatacg gcttgatctc caggttacgg ccccggtgga
       61 ggtcctcgaa gccgcccacc tcaccttcgt agatcaggcg gtagagccct tcggttcgtc
      121 cccaaccccg ccagagagcg acttcgttct tccgccggat gaaccgctgc gcgttgaccc
      181 caaaggaccc gccacctgac cgaaagcgca gggtccggaa cggaatccgg aactcggcgg
      241 tccaaccggt tgtatctcgg acgaccgcca cgtcccagat gccattccag ttctcatcta
      301 cctcatcgac gccggtcaac tgggcgtccc acatagcgcc gttcggattg gtgctgaaca
      361 caaacccgct gcgccggtcg tggaagctgt cgatcagcag cgtgatttca tcatcgacgg
      421 agaggtcggc atcacgcctg agctgggtgg cgcggatgcc gcggaggtcg gagtcgtagg
      481 catgaacacc gacgtacagc gcatcccggt ctcgcgcaac cttcatcacc gttcgttccg
      541 tacacggcgc accctgtgct ggttcgcgtt gccggaactc ccagatggag tcggccgatt
      601 cccagaacga ctcggtcaat cggccatcga tctgtactcc gccgatgatg acggtcgccg
      661 tcagacgttc ctgggccgca gccggcttcc gcgctacgag gcaggcgaaa aacaggagca
      721 cccaacctcg ctggatcacc ttcgcaccgc cagaccgacc gcctgcatac ggggaagccg
      781 gccgcatcgg aaatacgtca tcgccagtgc cactacaatg gcgaggctcg gcagtacgaa
      841 gctgagtccc gagagcgtcg cgccgatgat cccacgctga tgcagcggag gtaaagcaga
      901 gctgggcggc gtatcccgcg agcgtggcgg agacggcgga gcactgctgt cgatcatcga
      961 tgactcgatg gagcgggcag tctgacgtca gatgccctgg tcttgcaatg taaccgagat
     1021 tacataaccc agcaggacag ggatggggat ataacggagg tagcgcgatg cgaaacaccc
     1081 cgcggacatt gggcgtgagc aggttcggtc tgggaccttt ctcgcttctg gttctggtga
     1141 cgtgggctac gccttcaacg gcgcaggctc ctgctgactg gtcaaaggtc gccgaagctc
     1201 tggggaaatc ggggtcggtg cagccgggtg atgtctataa ggtaggtctg ccaaggagtg
     1261 acctgcacgt cactgccggc ggcgtgccgg tcaaaccggc gttcgccctc gggtcctggg
     1321 tggcgttcaa gcaggcgggc ccgccaggtg aagcagttgc catgggcgat ctcgtg
//
LOCUS       DASRPQ010001534         1336 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2721149, whole genome shotgun sequence.
ACCESSION   DASRPQ010001534 DASRPQ010000000
VERSION     DASRPQ010001534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1336
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2721149"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            195..1262
                     /locus_tag="VFD73_17485"
     CDS             195..1262
                     /locus_tag="VFD73_17485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI75776.1"
                     /translation="MRPGIALRPDYDAAQLWALARATRHAGQSRRLLALAEIYDGGSR
                     TKAARIGGVGLQTLRDWVVRFNARGPEGLIAGKAPGNACKLNDPQRQALVEMVERGPT
                     PALHGVVRWRLKDLTLWVWEEFQISLSETTLSRELRALGYRKLSARPRHYAQDPEALE
                     LFKKGLPATLETIRAGLPNGTPLELWWQDEARVGQKNKIARRWARRGTRPRAPHDQRT
                     SSVYIFGAICPQQGKGAALVLPRCDTQAMSLHLAEVAQAVAPGAHGVLLMDRAGWHCT
                     KDLVVPDNLTLVLLPARAPELNPVENIWLFLRENWLSSRVFGSYADIVDHCCDAWNRL
                     IDQPWLIMSIGLRDWANASNA"
BASE COUNT          226 a          424 c          454 g          232 t
ORIGIN      
        1 agcagaacga aaccgagcgc cggtccgcag gcgcggttcg aaagcgcccg acagtcggtt
       61 cgccgcgaat tgtgggttca gcgaggttct ggagcgtgac gcgatagagt accaacccgc
      121 gtgaaggctg actcattccg gggttttcag agcggagcga gtcagactct ctggaggcga
      181 acaggaggtt cgccatgcgg ccagggattg ctcttcgtcc ggactatgac gccgcccagc
      241 tttgggcctt agcgagagcg acccggcacg cgggtcaaag tcggcggttg ctggcgctcg
      301 ccgagatcta tgatggtggc tcccggacca aggcggcgcg gatcggcggc gtcgggttgc
      361 agacccttcg ggactgggtt gttcggttca acgcgcgcgg cccagagggc ttgatcgccg
      421 gcaaggcccc ggggaacgcc tgcaagctga acgaccccca gcgccaggcc ttggtagaga
      481 tggtggagcg cggcccgacg ccagcgctcc atggggtggt tcgctggcgg ctgaaggatc
      541 tgaccctgtg ggtctgggag gagttccaga tctcgctcag cgagacgacg ttgagccgcg
      601 aattgcgcgc gcttggctat cgcaagctct cggcccgccc ccgccactat gcccaggatc
      661 ctgaggcgct ggagcttttt aaaaaaggtc tccccgccac cttggagacg atccgggcgg
      721 gtctcccgaa cggcactcct ctcgaactgt ggtggcagga cgaggcgcgg gtgggccaga
      781 agaacaagat cgcccggcgc tgggcccgac ggggaacccg gccccgcgcc ccgcatgatc
      841 agcggacgag ctcggtctac atcttcgggg cgatctgccc gcagcagggc aagggcgcag
      901 ccctggtgct gccgcgatgc gacacgcagg ccatgagcct gcatctggcg gaagtcgcgc
      961 aggctgtggc tcccggagcc catggggtcc tgctgatgga ccgggccgga tggcactgca
     1021 ccaaggacct tgtcgtacca gacaatctca cgctggtgct gctgcccgcc cgagcgcccg
     1081 aattgaaccc ggttgagaac atctggctgt tcctgcgcga gaactggttg tcgagccgcg
     1141 tgttcggctc ctacgccgac atcgtcgatc actgctgcga cgcgtggaac cgcctcatcg
     1201 accaaccctg gctcatcatg tccatcggcc tccgcgactg ggccaatgca tccaatgcat
     1261 gatgatcagc gcgggttggt attccgcacc ttgttcaggg tcagccgctc ctcgtcggcc
     1321 acctcgtcga ggctgt
//
LOCUS       DASRPQ010001535         1707 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1450288, whole genome shotgun sequence.
ACCESSION   DASRPQ010001535 DASRPQ010000000
VERSION     DASRPQ010001535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1707
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1450288"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            35..106
                     /locus_tag="VFD73_17490"
     tRNA            35..106
                     /locus_tag="VFD73_17490"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:67..69,aa:Gly,seq:ccc)
     gene            618..>1707
                     /locus_tag="VFD73_17495"
     CDS             618..>1707
                     /locus_tag="VFD73_17495"
                     /inference="COORDINATES: protein motif:HMM:NF014428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75777.1"
                     /translation="MTDDGGNPVAGVTVHWTPDEGTVSNSDVKTGSDGHASVQRVLGP
                     TAGQQTTTASVSGLDGSPVTFTSTALPAGSPGIALLTQPPSSALDAEVFDPANQPVVA
                     LSDDQGHPRAGVQVTAQIASGGGTLEGTNSATTDANGLAAFGDLGIRGPGSKTIQFAA
                     GSATVTSSSITISPLPAEASTGAWGPVIQWDIVPLQMTLFPNGKIFAWGKRNHEPFSA
                     ADSIGIPRIWDPAVGDPLTATQVSGVTDMLFCAGHTLLPDGRLMTAGGHFMDDAGVKA
                     TYFFSQDGSAQKGPDMAYGRWYPTLTVLGDGRVLTMAGRDETGTTITIPELWEGNQWV
                     QLPGGSSVQLPYYPRNFVDPTGRGVFMAG"
BASE COUNT          314 a          537 c          528 g          328 t
ORIGIN      
        1 tccgattctt cggctatact ttccgctgca acacgcgggc gtaattcagt ggtagaatgc
       61 cagcttccca agctggacgt cgccggttcg agtccggtcg cccgctctga ataccgtctt
      121 ctgcccgtgt gtgccgcccg ccttcttcct cttcataccg ctttcaggtc cggttcactt
      181 catcacgtgt ataatggtgc cagcgctaac ccacggagca cccgggccgc ttgccaatca
      241 agcacactgg agcaggtgct gtgatagggt tagccttacg tggcgtggat gcaacggcca
      301 cgccggagtc tggtttctaa gttgaagccg gaccaaaact tacgaacgac aaaacgggtg
      361 tttcaccggc ccgggacctg cataggcagg ccagcttggc ggtgcgtccg tgttcccata
      421 aacctgcagc ggaaaattga gtgatgaata gacctcggcg attacgcaat tggctcctcg
      481 ctggtgtgct cgctgccagc gcgcttcgat gcggggacaa cgtcgcccct ccaaacgcga
      541 aggccatcca gatgacaagc ggggacggcc aaagtggccc cgcgcagcag ccccttcctc
      601 agccactcgt ggttctggtg actgacgacg gtggcaaccc ggttgcggga gttacggtgc
      661 attggactcc ggacgagggc accgtatcga actcggacgt caagactggg tctgatggtc
      721 atgcttcggt gcagcgggtc ctggggccca cagccgggca gcaaacgacg accgcctccg
      781 tgtccgggct ggatggctcc ccggtcacct tcacgtccac cgcgcttccc gccggctctc
      841 ccggaattgc gctgctgact caaccgccca gctcggccct cgatgccgag gtcttcgatc
      901 ctgccaacca gccggtcgtt gcgctgagtg acgatcaggg gcatccccgg gcaggtgtcc
      961 aggtcacggc acagatcgcg tccggaggcg ggacgctgga gggcactaac agcgcgacga
     1021 cggacgcgaa tgggctcgcc gcatttggcg atctcggaat tcgcggccca ggttcgaaga
     1081 cgatccagtt tgccgccgga tcggcgacgg tcacttcatc gtcgatcacc atttcgccac
     1141 tcccagccga ggccagcacc ggagcctggg gacccgtgat ccagtgggac atcgtaccgc
     1201 tgcagatgac cttgttcccg aacggcaaga tcttcgcttg gggtaagcga aaccacgagc
     1261 ccttctcagc cgcggatagc atcggtattc cgagaatctg ggatccagcg gtgggggatc
     1321 cgctcactgc gactcaagtg agtggcgtga ctgacatgct cttctgtgcc gggcacaccc
     1381 tgttgccaga tggacggctg atgaccgcgg ggggtcactt catggacgat gccggggtca
     1441 aggccacgta ctttttctcc caggacggat cggcccagaa gggaccggat atggcgtacg
     1501 gccgctggta tcccacacta acagtgctgg gcgacggccg cgtcctcacc atggcgggac
     1561 gggacgaaac cggaacgacc atcacaattc ccgagctctg ggaaggcaat caatgggtgc
     1621 agctgcccgg cggtagcagc gtgcagctgc cgtactatcc ccggaatttc gtcgatccga
     1681 ccggtcgtgg tgtcttcatg gctggcg
//
LOCUS       DASRPQ010001536         5674 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2085829, whole genome shotgun sequence.
ACCESSION   DASRPQ010001536 DASRPQ010000000
VERSION     DASRPQ010001536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5674
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2085829"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VFD73_17500"
     CDS             complement(<1..183)
                     /locus_tag="VFD73_17500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75778.1"
                     /translation="MIEVPRNGFFAELNLSAANGLRLTLVFLALLTGCKQKAQAPAYQ
                     AVAVERRDIVVSAQASG"
     gene            complement(180..938)
                     /locus_tag="VFD73_17505"
     CDS             complement(180..938)
                     /locus_tag="VFD73_17505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI75779.1"
                     /translation="MTGTLMNTEERMAMLPPDVPRDAVIVTRNLQRDYDMGGEIVRAL
                     RGVDLTIRKNEFVAVMGPSGSGKSTLMNLIGCLDSPTSGEYWLNGHRVSELEDDELAR
                     IRNKEIGFVFQTFNLLPRATSLHNVELPLVYAGVGGKERRELASQALTKVGLADRMNH
                     RPNELSGGQRQRVAIARALVNSPSILLADEPTGNLDSATSEEIMSLFESLHGTGQTIV
                     LVTHEQDIAQHAFRQVHLKDGKVERDFETAERNQ"
     gene            complement(935..2233)
                     /locus_tag="VFD73_17510"
     CDS             complement(935..2233)
                     /locus_tag="VFD73_17510"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HZI75780.1"
                     /translation="MRYRLLSILWLTAAPAASWAQERSVTLDEAIRLAERVQPDVVRA
                     STAVRTAGAQRRNAWGAFLPNLTASSSASDFFSEGESRVDPVTGLVTRGNSTNRSIST
                     SLSASIDLFTGFRRGAELSAARANESAADASLIDARFQQSLATTNQFLDALAAAQLVR
                     VREASVRRAEEQLKVSVAKLRAGSATRSDSLRSLVTLGNTQLDLITTQTDLATAEANL
                     ARLIGESGRVRAADDSAFYGVVPVLDTQAIRLEAESKSPRVQSAVSSASAARADVRAS
                     RSGYWPTLALSANTGWNGNRENDYTLLNQRQISLALRWSLFDRFDRELNIVQREADLD
                     VAEATAADAKRGVEAELQKWLAELDAAKTRIQITQTSVAAATEDLRVQQERYRVGAST
                     IVDVLTSQEALNQAEVDVVNARFDYLRAKAQLEALIGRKL"
     gene            complement(2290..3687)
                     /locus_tag="VFD73_17515"
     CDS             complement(2290..3687)
                     /locus_tag="VFD73_17515"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HZI75781.1"
                     /translation="MTAPRLVAAEESVACAINRAAGGPPVPGNQVDLLIDGPESYRAM
                     LDAIAAAKQWIHFENYKIRSDSAGWRFAELLAQRARQGVHVRVLYDWFGCFMTSRGYW
                     RYLRDAGAEVRAFHRPQVIDVVTNLSRNHRKLVVADGQRAILGGLCIGCEWTGEAHKD
                     GQPWRDTAVDIRGPAAAVLDQTFVNLWKMTGTGVPAGHVAGEVPPAGNAEVRVISGEP
                     GRERAYRVIELLAIGSVQRLWITDAYLVAPPRLFQALRDSARDGVDVRLLVPGSSDVP
                     LIRNLSRIGYRDLLRSGVRIFEWDGPMLHAKTMMCDNRWVRIGSSNLNPSSLLGNYEL
                     DVLIEDHQLAQAMEDQFRHDVARSREVASRPVRGPRRISQALPSALTHQHPVSASVYQ
                     RSGRENRRRAVLVLRAVASHARRSVFLPISAIFVALGLLLVALPKVSAYVLAALCAWL
                     ALGAGREAFRRRLDR"
     gene            complement(3684..4259)
                     /locus_tag="VFD73_17520"
     CDS             complement(3684..4259)
                     /locus_tag="VFD73_17520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDIG domain-containing protein"
                     /protein_id="HZI75782.1"
                     /translation="MTRDEALALVHEYTASEALRKHMYAVEIAMRAMAERVGEDPEPW
                     GLVGLLHDFDYERYPNPEHSATEGHPAEGVRILAARGLPDSMQRAILGHATYSGVPRD
                     TPMARALFGVDELAGFLVACALVRPSKSLQDLEVSSVKKKLKDKAFARGVSREDVYQG
                     AEELGVPLDEHIAFLLGALRPHEKLLGLGAG"
     gene            4328..4879
                     /locus_tag="VFD73_17525"
     CDS             4328..4879
                     /locus_tag="VFD73_17525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75783.1"
                     /translation="MTRRKRHYYRILSFTRGSLQCPLTAHRLPLTAPAYRVGLRVTGG
                     ERDPVGEFAVEADLERVLAWAGKGNVEYQDRSRLDVDYASRGLTELHRSFTAEELVAT
                     LVDKTNTNGVNANFRATPADPEDQMGTGVHRWEVGQPDVLEHPEHTQLSLLVDQGVIS
                     DNGKVEVQLQLTRIDVMTSFCRI"
     gene            complement(4834..5283)
                     /locus_tag="VFD73_17530"
     CDS             complement(4834..5283)
                     /locus_tag="VFD73_17530"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HZI75784.1"
                     /translation="MAKTATINTSKGTIVAELFDKEVPNTVQNFEKLANSEFYDGTRF
                     HRVISNFMIQGGDPLSKDPNNPRVGTGGPGYKIKCETHLNTHKHTAGTLSMAHAGKDT
                     GGSQFFICHSPQPHLDRVHTVFGQVTQGMDVVNQIRQNDVITSIRVN"
     gene            complement(5350..>5674)
                     /locus_tag="VFD73_17535"
     CDS             complement(5350..>5674)
                     /locus_tag="VFD73_17535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75785.1"
                     /translation="YAATYLLAVDWHLNPASHMVVVGEAHDPLAQAMHRQALASFVPR
                     RVVQLVGPSQVQARPLPPALREMLRVAKETRGYLCTGTSCSQPASDLVQWQSTLESAR
                     PGVHA"
BASE COUNT         1036 a         1811 c         1786 g         1041 t
ORIGIN      
        1 gcccgatgcc tgtgccgaca ctacaatgtc ccgccgttcc actgcaacgg cctgatacgc
       61 cggagcctgg gctttctgct tgcagccagt tagcagggcc aggaaaacga gtgtcagtct
      121 gagtccattg gccgcgctca ggttgagctc cgcgaagaaa ccatttctgg gcacctcgat
      181 cattgatttc tctccgcggt ctcgaaatcc cgctccacct ttccatcctt caggtgcacc
      241 tgccggaacg cgtgctgggc aatgtcctgc tcgtgcgtga ccaggacaat ggtctggccg
      301 gttccatgca gcgactcgaa cagcgacatg atctcctcgc tcgtcgcgct gtcgagattt
      361 cccgtcggct cgtctgccag aagaatgctg gggctgttga ccagggcccg cgcgatggca
      421 acccgctgcc gctgcccgcc ggagagctcg ttgggccggt gattcattcg atccgccaga
      481 ccgaccttgg tcagagcctg actggccagc tcgcggcgtt ctttgccgcc gacaccggca
      541 tagaccagag gcagctcgac gttatgcagg ctggttgcgc gaggaagcag attgaaggtc
      601 tgaaagacga aaccgatctc cttgttgcga atgcgggcga gctcgtcgtc ctccagctcg
      661 gagacccgat gcccgttgag ccagtattcc cccgaagtag ggctgtccag gcagccgatc
      721 agattcatca gggtcgactt gcccgagccc gaggggccca tgacggcgac aaattcgttt
      781 ttcctgatgg tgaggtccac gccgcgcagg gctcggacga tctcgccccc catgtcatag
      841 tcccgttgca ggttgcgggt gacgatcacg gcatcccgcg gcacgtcggg cggcagcatg
      901 gccatccgct cttcggtgtt catcagagta ccggtcacag cttccgtccg atcagcgctt
      961 cgagctgcgc cttggcgcgg agatagtcga atcgtgcgtt caccacgtcg acttccgcct
     1021 ggttgagggc ctcctgcgac gtgagcacat ctacgatggt cgaggcgccg acccgataac
     1081 gctcctgctg cacccggagg tcttcggtgg ctgcggccac gctggtctgg gtaatctgga
     1141 ttcgcgtctt ggcagcatcc aactccgcga gccatttttg cagctccgct tccactcccc
     1201 gcttggcgtc agccgccgtt gcctctgcga catcaagatc agcttcacgc tggacgatgt
     1261 tcagctcgcg atcgaaacga tcgaataagg accagcgcaa cgcgagactg atttgtcgct
     1321 ggttgaggag agtgtagtca ttctcccgat tcccattcca accggtattg gcggagagcg
     1381 ccaacgtcgg ccagtacccg gaccgggagg cccggacatc ggcgcgtgcg gcgctggcgc
     1441 tggagacggc gctctggacc cgaggagact tcgattccgc ctccagccgg atcgcctgag
     1501 tatcgagcac aggtaccacg ccataaaacg ccgagtcatc agcggcacgc acccggccac
     1561 tttcaccgat gagtcgggcc aagttcgctt cagccgtggc caggtcggtt tgggtggtga
     1621 ttagatccag ctgggtattc cccagggtca ccagcgatcg gagcgaatcc gaccgcgtgg
     1681 cggagccggc gcgcagcttg gccacggaga ccttgagctg ttcctcagcg cgtcggacgc
     1741 ttgcctcccg aacccgcacc aactgcgcgg ctgccaacgc atccagaaac tggtttgtcg
     1801 ttgccagcga ctgctggaag cgcgcatcga tgagcgaggc atcggccgct gactcgtttg
     1861 cccgggccgc actcagctcc gcgcctcggc ggaatccggt gaacaggtcg atgctggcag
     1921 aaagggaagt gctgatactc cggttggtgc tgttgcctct ggtgaccagg ccggtgacgg
     1981 gatccacccg ggattcgcct tcggaaaaga aatcgctggc ggaggagctg gcagtaaggt
     2041 tgggcaagaa ggcgccccat gcattccgcc gctgggctcc cgccgttctc actgccgtcg
     2101 aggcccggac cacgtccggc tgcacccgct ccgccaggcg gatcgcctca tccagggtga
     2161 cgctgcgttc ctgagcccag ctcgctgccg gggcagcggt cagccagaga atggagagca
     2221 gccggtacct cataaggtct gacccaacgg agcgtttggg ttaaagtttc accgcaaaag
     2281 gtgttgcgtc taccggtcca ggcggcggcg gaacgcctcg cggccagccc ccagggccaa
     2341 ccaggcgcat agcgccgcca ggacataggc tgagaccttg ggcaaggcaa ccaacagaag
     2401 cccgagggcg acaaaaatcg cgctgattgg gaggaacacc gatcggcgcg catggctggc
     2461 aacggcacgg agcaccagga cggcccggcg acgattctcc cgaccgctcc tctgatatac
     2521 ggaggcagag acagggtgtt ggtgggtcag ggcgctgggc agtgcctggc tgatccggcg
     2581 gggcccccgg acgggccggc tggccacctc ccggctgcgg gccacgtcat gacggaactg
     2641 atcctccatg gcctgagcca gctgatggtc ctcgatcagg acgtcgagct cgtaattacc
     2701 cagcaggctc gaaggattga gattgctcga cccgatgcgt acccaccggt tgtcgcacat
     2761 catggtcttg gcatgcagca tcggtccatc ccactcgaag atgcggacgc cgctccgaag
     2821 gaggtcgcga tagccgatgc gcgaaagatt acggatcagc gggacatcgc tggagccagg
     2881 caccagcagg cgaacgtcca ctccgtcgcg ggccgaatcc cgaagcgcct gaaacaatct
     2941 gggtggcgca acgagatagg cgtccgtaat ccagagccgc tgaacactgc cgatcgccag
     3001 caactcgatg actcgatagg cgcgttcccg ccccggctcg ccgctgataa cgcgcacttc
     3061 ggcatttccg gcgggcggaa cctccccggc gacgtgcccg gcgggcacgc cggttccagt
     3121 catcttccag agattcacaa aggtctggtc cagcaccgcc gcagcggggc ctcgaatgtc
     3181 gacggccgta tcgcgccagg gctggccatc cttgtgggct tcaccagtcc actcacagcc
     3241 gatgcacaag ccgccgagaa tggcgcgttg tccgtcggcc accaccagct tccggtggtt
     3301 gcgcgacagg ttggtcacca cgtcgatgac ttgaggccgg tgaaacgccc ggacttccgc
     3361 cccggcgtca cggagatagc gccagtaccc ccgtgacgtc atgaaacacc caaaccagtc
     3421 gtacagaacc cggacatgga cgccttggcg ggcgcgctgc gccagcagct cggcgaagcg
     3481 ccatccggcc gagtcgctcc ggatcttgta attctcgaaa tgaatccact gttttgccgc
     3541 ggcgatcgca tccagcatcg cgcggtaaga ctcgggtccg tcgatgagca gatcgacctg
     3601 gttgcctgga acgggggggc cgcccgcggc gcggttgatc gcgcacgcca ctgactcctc
     3661 tgccgcgacc agccgtggag cggtcacccg gctccaagtc cgaggagctt ttcatggggc
     3721 cggagcgccc ccagcagaaa tgcaatgtgc tcgtccagag gcacccccaa ctcctcggca
     3781 ccctgataga catcctcccg gctcactccg cgggcaaagg ccttgtcctt cagcttcttc
     3841 ttgacgctgg agacctcgag atcctgaagg ctcttggacg gtctgaccag agcgcatgcc
     3901 accaggaagc cggccagctc gtcgacgccg aatagcgccc gggccatcgg cgtatcgcgc
     3961 ggcactccgc tgtaggtggc atgtcccagg atcgctcgtt gcatcgagtc gggaagaccg
     4021 cgtgccgcca ggatgcgcac tccttccgcc gggtggcctt cggtggcgga atgctcgggg
     4081 ttgggatacc gctcgtagtc gaagtcgtgc agcaggccca ccagacccca gggctcaggg
     4141 tcttctccca cccgctcggc catcgcccgc atggcgatct ccacggcgta catgtgcttt
     4201 cgtaacgcct cggaggcggt gtactcgtgc acgagggcga gagcttcgtc ccgggtcatg
     4261 gacacaacgg tgagcggtga acggtgagag gtgagcggag gaggtcaggc gcaggtccgc
     4321 gtgcccgatg acacgtagaa aacggcatta ctatcgtatc ctcagcttca ctcgtggatc
     4381 actccaatgc ccgctcaccg cccaccgctt accgctcacc gctcccgcct accgggttgg
     4441 tctgcgggta accggcggag agcgcgaccc ggttggcgag ttcgccgtcg aggctgatct
     4501 cgaacgcgta ctggcctggg cggggaaggg gaacgtcgaa taccaggacc gctcccgcct
     4561 cgacgtcgac tacgccagcc gggggctcac cgaactgcac cgttccttca ccgccgagga
     4621 gctcgttgcc accctcgtcg acaaaacgaa tacgaatggt gtgaacgcca atttccgtgc
     4681 gacgcccgcg gacccggagg accagatggg tacgggggta caccgctggg aagttggaca
     4741 gccagacgtg ctggaacatc ccgagcacac tcagctttcc ctgttggtcg atcagggcgt
     4801 aatcagcgac aacggcaaag tcgaggtgca gcttcagttg acccgtatcg atgtgatgac
     4861 gtcgttctgc cggatctgat tgacgacgtc cattccctga gtgacctgcc cgaagacggt
     4921 gtgcacccgg tccaggtgag gctggggact gtggcagatg aagaattggc tgcccccggt
     4981 gtcctttccg gcgtgcgcca tcgaaagggt tcccgcggtg tgtttgtgcg tgttgaggtg
     5041 ggtctcgcac ttgatcttgt agccgggacc accggtgccc acccgaggat tattcgggtc
     5101 cttcgacagg ggatcgcctc cctgaatcat gaagttggag attacccggt gaaaccgggt
     5161 cccatcatag aactcgctat tggccagctt ttcgaagttc tgaacggtgt tcggaacttc
     5221 cttgtcgaac agttcggcta caatggtgcc tttggacgta ttgatggtcg ctgtctttgc
     5281 cacggtatcc tcggaagtaa gctcacccat aatgtacacc cggacggttc cactcccgcg
     5341 atcgggcagt caggcgtgaa cgccgggtcg cgcggattcg agtgtcgact gccactgtac
     5401 cagatcggaa gcaggttggc tgcagctcgt gccggtgcag aggtatccgc gggtttcttt
     5461 ggccactctc agcatttcgc gcaacgcagg cggaagcgga cgtgcctgaa cctggctggg
     5521 gccgaccagc tgaaccacac gacggggaac gaaggaggca agcgcctgcc ggtgcatggc
     5581 ctgggcgagt ggatcgtgcg cttcgccgac cacgaccata tggctagcag ggttcaggtg
     5641 ccaatccacc gcgagcaggt aggtcgcggc atac
//
LOCUS       DASRPQ010001537         1293 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3346689, whole genome shotgun sequence.
ACCESSION   DASRPQ010001537 DASRPQ010000000
VERSION     DASRPQ010001537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3346689"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(374..>1293)
                     /locus_tag="VFD73_17540"
     CDS             complement(374..>1293)
                     /locus_tag="VFD73_17540"
                     /inference="COORDINATES: protein motif:HMM:NF024752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZI75786.1"
                     /translation="QVAEHVRALAVEEDVAGAGGRTCPQRLLDEPGMLFNTLLFGLAP
                     GAAGHLKKFRDTPHEIGNKQRLSWQALRVPLTESSSPGEPLRYYRTTGLVLTQMQELV
                     RRVKETLREPWNKLTGRPKSLGLYQAVEAACMYLRQNVTQEFIGDMRDTSQPTISRYV
                     AELVPIVKAVLEEFVPSAEEAIEIIRGRVVLVDGTLAPCWSYEEHQELWNKKHKTTGF
                     NAQLISLLDGTAAWISAPLPGKTHDARAFEETGAADILKEAGGGFGDKGYQGTGLITP
                     KKKPIGGELSLSDKEYNSQISSFRAQSNG"
BASE COUNT          233 a          393 c          391 g          276 t
ORIGIN      
        1 cctctcagca tgccatatgg gtgcggctct ttcagagtga gcggtgcgga cggcgcaccg
       61 ccgggggcac ggccgcatca cagcgggcac tgcagtatca ccggccacag cccgggtgcg
      121 gggcggctgc atcacaggcg catggttgca gcaatacaga cctcctgggg accggccggg
      181 taataacctg ccggcccgca gccggccagc cgcccgggca gatcatcgcc tgctcgtctc
      241 caggagcgtt attcaaaacc ccatgttatt gagaagaaga aaaggccgcg ggccgcgtcg
      301 aatgcatcat agtaggtcga gtacggacgc cggtagtcgg tgtggaatat cttccaggtc
      361 ttgaagtggc caactagccg ttcgactggg cgcggaacga cgagatctgt gaattgtatt
      421 ctttgtcgga caggctgagt tcgccgccta tcggcttttt cttcggggta atcagcccgg
      481 ttccctggta gcccttgtcg ccgaatccgc ccccggcctc tttcaggata tccgcggccc
      541 cggtttcctc gaatgccctg gcgtcatgcg tcttcccggg aagcggagcg gaaatccagg
      601 ccgcggtccc gtcgagaagt gatatcagtt gcgcgttgaa gccggtggtc ttgtgcttct
      661 tgttccacaa ctcctggtgc tcctcgtagg accagcaggg cgccagcgtg ccgtctacca
      721 ggacgacccg gcccctgatt atctcgatgg cctcttcggc tgatggcacg aattcctcga
      781 gcaccgcctt cacgatgggc accagttctg ccacgtaccg ggaaatggtg ggctgcgacg
      841 tatcccgcat gtccccgatg aattcctgtg tgacattctg ccgtaggtac atgcaggctg
      901 cttcgaccgc ttggtacagc cctagggatt tcggccgccc ggtgagctta ttccacggct
      961 cgcgaagtgt ctctttcacg cgccggacca gctcttgcat ctgggtgagt accaggccag
     1021 tggtacgata gtagcgcaac ggttctccgg ggcttgagga ttctgtgaga ggaactctca
     1081 aagcctgcca ggagagccgt tgtttattac ctatctcatg cggcgtgtcg cgaaatttct
     1141 taagatgccc ggctgcgccc ggggcgagcc caaataaaag ggtattgaat aacattcccg
     1201 gttcatcgag aagccgctgc gggcaggtcc ggccacccgc cccagcgacg tcttcttcga
     1261 ctgccaaggc ccggacatgc tcggcaactt gtt
//
LOCUS       DASRPQ010001538         4926 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3346766, whole genome shotgun sequence.
ACCESSION   DASRPQ010001538 DASRPQ010000000
VERSION     DASRPQ010001538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4926
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3346766"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(86..1318)
                     /gene="hutI"
                     /locus_tag="VFD73_17545"
     CDS             complement(86..1318)
                     /gene="hutI"
                     /locus_tag="VFD73_17545"
                     /EC_number="3.5.2.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050480 - imidazolonepropionase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazolonepropionase"
                     /protein_id="HZI75787.1"
                     /translation="MRVLANVGQLATCRPEGSQGDIHVVPHAAVAWDGEGTITWVGPE
                     RDLPSEYHSAERWDAGGQLVIPGMIDCHTHLAFAGWRADEFVQRIQGRSYLEISRAGG
                     GILSTVRSTRAADGAQLFSRARQFLEEMCALGITCVECKSGYGLDEANELKLLRVYQR
                     LAAEQPVRIVATFLGAHVVPPEFRERRGEYLDLLTEKLIPRIAREHLATCCDVFVEDS
                     AFTVAEASRILLAARAAGLHPKLHADQLTSGGGAELAAAVHAISADHLECVSERGIEA
                     LAKAGVVAVGLPLASVYLNQTPMPARRLITAGVPVAIATDFNPGSAPSFHLPLALTLA
                     CTLLRMTPEEALKGATIYGARAVGQQQLLGSLEPGKRADFALIEASDVREWLYHFRPN
                     ACTMTVIGGARVPRSVTV"
     gene            complement(1322..3001)
                     /gene="hutU"
                     /locus_tag="VFD73_17550"
     CDS             complement(1322..3001)
                     /gene="hutU"
                     /locus_tag="VFD73_17550"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016153 - urocanate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HZI75788.1"
                     /translation="MATLTHPHRITAPRGSTISCLGWPQEAALRMLMNNLDPAVAERP
                     EELIVYGGGGKAARNWECYERIAATLQRLKNDETLLVQSGKPVGVFRTHDEAPRVLIA
                     NANLVPRWATWDEFRRLEALGLTMYGQMTAGSWIYIGTQGILQGTYETFAECARQHFG
                     GTLEGRLVVTGGLGGMGGAQPLAATMNGAAFLGVDVDEQRIRRRVETRYCDRLETDLD
                     SALRELLDARSKKRPLSIGLVGNIAEVLPELVRRGVAPDVVTDQTSAHDLRLGYIPLG
                     VTLEEAARLRESDPAEYERRVLDSMAIHVKAMLALQGRGSVVFDYGNNIRGQVADHRG
                     MAEAFDIPGFVPAFIRPLFCKGAGPFRWVALSGDPADIAATDRAVLETFPHKEALARW
                     IRQAQQRVAFQGLPARICWLEYGERAEMGLRFNWLVKKGKVGAPIVIGRDHLDAGSVA
                     SPNRETEAMRDGSDAIADWPLLNALLNTACGASWVSLHHGGGVGIGYSIHAGMVAVAD
                     GTESADRRLERVLTADPGTGVMRHADAGYPLALETAHERGIDLPMVNGDEQ"
     gene            3095..3667
                     /locus_tag="VFD73_17555"
     CDS             3095..3667
                     /locus_tag="VFD73_17555"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HZI75789.1"
                     /translation="MNELGLGVATLEHEYTGRTDPDAVDATLAASGDASAFERLYRNH
                     VSRVYGLVRRMLNDDDIDEVAQDIFVRAWQKLGTFRGEAAFGTWLHRLAVNVILARRE
                     SLGTRRKRYLEGDAILDAVPARRPGPEMAMDFESAMQRLPDGAREVFVLHDVEGYRHE
                     EIAEMLGLATGTSKSQLHRARMALRQHLER"
     gene            3679..4371
                     /locus_tag="VFD73_17560"
     CDS             3679..4371
                     /locus_tag="VFD73_17560"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HZI75790.1"
                     /translation="MTDGWSDRLSDYLDGDLPDNERVALEAHLDGCAECTAVLDDLRR
                     VVQRARTLSPAAPTVDLWPAIARRIGASAPREPEVIELSSRRKPGRRWAFSLPQLAAA
                     GIALMTLSGGAVWMLNSSARTSTVATVKPAPTEEPRAITIGEKRSASQSYAAAVADLE
                     RVLAEGRGRLDTTTVRVIEQNLAAIDRAIAEAQRALDADSANLYLNTHLAETMRRKLD
                     LLRQAASLVRVS"
     gene            4384..>4926
                     /locus_tag="VFD73_17565"
     CDS             4384..>4926
                     /locus_tag="VFD73_17565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75791.1"
                     /translation="MLFALVTGALALTGLQQIDTTVAVSRGQRLDVNAFGGDVTVHAW
                     NRNTIRIEASTSGRDRVEITTSATAVSVRTQGRHGPPSEVTLRISAPPWVGLNLSGVN
                     TSLKVDGVRAPITAETVEGEVNVTGGDGLVSLRSVQGAVTLKNARGRISLNSVNEDVR
                     VSGSAGDVVAQTVNGEIDLQL"
BASE COUNT          921 a         1617 c         1538 g          850 t
ORIGIN      
        1 agttgcccct acagtgcacc gtgctggcgg accgcgcaag gagcactgga gaccaggagg
       61 gccgccacca agtcgtaaca caccgtcaga ccgtcacact gcggggcaca cgagcccctc
      121 cgatcaccgt catggtgcac gcgttcggcc ggaaatgata caaccactcc cgcacgtcgg
      181 acgcctcgat cagagcaaag tccgcccgct tccccggttc caacgatccg agcagctgct
      241 gctgtcccac cgctctggcg ccgtaaatag tcgctccttt gagcgcctct tccggagtca
      301 ttctgagcag cgtgcatgct aatgtgagag ccagagggag atggaacgat ggtgccgatc
      361 caggattgaa gtcggtggca atcgccaccg ggactcccgc cgtgatcaac cgccgcgccg
      421 gcatcggagt ctgattaagg tagaccgagg cgagtggtaa gcctaccgcc acgacaccgg
      481 ctttggccaa cgcctcgata ccgcgttcag agacacactc caagtgatca gcagaaatgg
      541 catggaccgc ggccgcgagc tctgctccgc cgcccgaggt cagctgatcg gcatgcagct
      601 tcggatgcag gcccgccgcc cgcgctgcca gcaggatccg cgaggcctcg gccactgtaa
      661 acgccgagtc ctcgacgaat acatcgcagc aggtggcgag gtgctcgcgg gcaatccggg
      721 ggatcagttt ctcggtaagc agatccaggt attcaccacg tcgctcccgg aactcggggg
      781 gtacgacatg cgcgcccagg aacgtggcga cgatgcgaac cggctgctca gccgccagcc
      841 gttgatagac ccggagcagc ttgagctcgt tcgcctcatc gagaccgtaa ccgctcttgc
      901 actcgacaca ggtgatcccc agggcacaca tctcttccag aaactgccga gcccgggaga
      961 agagctgtgc cccgtcggcc gcccgcgtac ttcggacagt ggagagaatg cctccgccag
     1021 ctcgggagat ttcgagatag ctgcggccct gaatccgttg gacgaattcg tccgcccgcc
     1081 atccggcgaa cgccagatga gtatgacaat cgatcatgcc gggaatgacc agttggcctc
     1141 cggcatccca tcgttcggca gagtggtatt ccgagggaag gtcgcgctcg gggccaaccc
     1201 aggtgatggt gccttcgccg tcccaggcta ccgcggcatg ggggacgaca tggatgtcgc
     1261 cctgggaacc ctcaggtcga caggtcgcga gctggccgac atttgccagg actctcatcc
     1321 gtcactgttc atccccgttg accatcggaa ggtcgatccc ccgttcgtgg gccgtctcga
     1381 gggccagcgg gtaccccgca tcagcgtgac gcatgacgcc ggtccccgga tccgcagtca
     1441 atactcgttc cagccgccga tcggcggatt cagtaccgtc tgccactgcg accatacccg
     1501 cgtgaatgga atagccgatt cccactcccc cgccatggtg gagcgagacc cagctggcac
     1561 cgcatgccgt gttgaggagc gcattcagga gcggccagtc agcaatggca tcggagccgt
     1621 ccctcatggc ctccgtttcc cggttcggag aggccaccga gccggcatcc agatggtctc
     1681 ggccgatcac gataggagcg ccgactttcc ccttcttgac cagccagttg aatcgaagcc
     1741 ccatctccgc ccgctcacca tattccagcc agcagatccg cgctggaagt ccctggaacg
     1801 ccacccgctg ctgcgcctgc cggatccagc gcgcaagagc ctccttgtgc gggaacgttt
     1861 ccagtaccgc ccgatcggtg gcggcgatgt cggcggggtc gcccgacagt gccacccagc
     1921 ggaaggggcc cgcgccttta cagaagagcg gacgaatgaa cgccggcacg aagccaggga
     1981 tgtcgaaagc ctccgccatt ccccggtgat cggccacctg tcctcgtatg ttgttgccgt
     2041 agtcgaacac gaccgagccc ctgccctgca gagcgagcat cgccttgacg tggatcgcca
     2101 tcgagtcgag cacccggcgt tcatattcgg ccggatcgct ctcgcgcaag cgggccgctt
     2161 cctccagcgt cacgccgagc gggatgtagc cgagccgaag atcgtgcgcc gacgtctgat
     2221 cggtgacgac gtcgggagcc actccccgcc gcaccagctc gggcagcacc tcggcgatgt
     2281 tcccgaccaa gccgatcgac agaggccgct tcttgctccg agcgtctagc agctctcgaa
     2341 gcgccgagtc aagatcggtc tccaggcggt cgcagtagcg agtctccacc cgtcggcgga
     2401 ttcgctgctc gtcgacgtct accccgagaa aggccgcgcc attcatggtg gcggccagcg
     2461 gctgcgcacc gcccattccc cccaacccgc cagtcactac cagccggcct tccagcgtgc
     2521 ccccaaagtg ttggcgggca cattccgcga atgtctcata ggtcccctgg aggattccct
     2581 gggttccgat gtagatccac gagcccgcgg tcatctggcc gtacatcgtg aggcccagcg
     2641 cctccagccg cctgaactcg tcccaggttg cccaccgggg aaccaggttg gcattcgcga
     2701 tcagcacccg gggtgcctcg tcgtgagtgc ggaagacgcc gaccggtttg ccgctctgga
     2761 ccagcaacgt ctcatcgttc ttgaggcgct ggagcgtggc cgcgatacgc tcgtagcact
     2821 cccagttccg cgccgccttc cccccacctc catacacgat cagttcttcc gggcgttcgg
     2881 cgacggcggg atccagattg ttcatcagca tccggagcgc agcctcctgc ggccacccca
     2941 gacaggagat ggtcgagcct ctgggtgcgg tgatgcgatg aggatgggtc aaggtggcca
     3001 tggcagagtt ttcctcagta ggcaggctca aggctagcct tcctccagtt ggacggcaac
     3061 cttttgggcc gtctgacgat ccaactctcc cgcgatgaac gaactcggcc ttggagtggc
     3121 gactctggag cacgaataca ccggcaggac cgacccggat gcagtggatg ccaccctggc
     3181 cgcaagcggc gatgccagcg cattcgagcg gctctatcgg aaccacgtgt cccgggtgta
     3241 cggcctggtg cggcggatgc tgaatgacga cgatatcgac gaagtggccc aggacatttt
     3301 tgttcgagcc tggcagaagc tcggaacgtt tcgcggagag gctgcattcg gtacctggct
     3361 tcatcgtctc gcggtaaacg tgatcctggc ccgtcgtgaa agcttgggta cccggcggaa
     3421 gcgatacctc gaaggggacg ccattcttga tgcggttccc gcgcgacgac cgggtccaga
     3481 gatggcgatg gattttgaat cggcaatgca gcggctgccg gacggagcga gagaagtatt
     3541 cgtattgcac gatgtggaag ggtatcggca cgaagaaatt gcggaaatgc tgggattggc
     3601 gactgggaca tcgaaatccc agttacaccg ggcgcgaatg gcgctgcgtc agcacctgga
     3661 gcgctgagga gaggaaccat gactgacggt tggagtgacc ggctctcgga ttatctggat
     3721 ggagatctgc cggacaatga gcgggtggca ctcgaggctc acctcgacgg atgtgccgag
     3781 tgcaccgcgg tactggatga tcttcgtcga gtagtccagc gtgcccggac gctctcgccc
     3841 gctgcgccga cggtggatct ctggcccgcc atcgcccggc ggatcggagc cagcgctcca
     3901 agagagccgg aggtcatcga gctgtcctcc cggcggaaac ccggtcgacg ctgggctttt
     3961 tcactgcccc agctggccgc ggccggaatt gcgctcatga cactctccgg cggcgcggtt
     4021 tggatgctga acagctcggc tcggacttcc acggtcgcga cagtgaagcc agccccgacg
     4081 gaagaacccc gcgccatcac catcggggag aagcgcagtg cctctcagag ctatgccgcg
     4141 gccgtcgccg atctcgagcg ggtgctggcc gaggggagag gccggctgga caccaccacc
     4201 gtccgggtga tcgagcagaa tctcgctgcg atcgaccgag cgatcgcaga agcccagcgg
     4261 gctctggacg ccgactcggc aaacctgtac ctcaacaccc acttggcgga gaccatgcgg
     4321 cgcaagctcg acctgctccg gcaggctgcc tccctcgttc gtgtgagctg aaaggaagcc
     4381 ccagtgttat tcgccctcgt caccggtgcc ctcgccctca cgggcctcca gcaaatcgat
     4441 accacggtcg cggtcagccg tgggcagcgg ctggacgtca acgcgtttgg tggtgacgtg
     4501 acggtgcacg cctggaatcg caacacgatc cgaatcgagg ccagcacctc cggacgtgac
     4561 cgggtcgaga tcaccacctc cgcgactgcg gtcagtgtac ggacccaggg tcgccacggt
     4621 ccaccctccg aggtaacgct ccgaatcagc gcaccgccct gggtggggct caacctctcg
     4681 ggtgtcaaca ccagtttgaa ggtggacggt gttcgcgcac cgattacggc cgaaacggtg
     4741 gaaggcgaag tcaacgtgac cggcggcgat ggactcgtat cgctgcgctc ggttcagggt
     4801 gcggtcactc tgaaaaacgc ccgcggccgg atcagcttga actcggtgaa cgaagacgtc
     4861 agagtctctg ggagtgccgg cgacgttgtt gcccaaaccg ttaacggtga aatcgacctt
     4921 cagctg
//
LOCUS       DASRPQ010001539         1160 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_802769, whole genome shotgun sequence.
ACCESSION   DASRPQ010001539 DASRPQ010000000
VERSION     DASRPQ010001539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_802769"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1160
                     /locus_tag="VFD73_17570"
     CDS             <1..>1160
                     /locus_tag="VFD73_17570"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HZI75792.1"
                     /translation="DGNVYAIWPADDVQVEPQEIANLIPLQSSFITRTQQPQEPIVVE
                     YRPMRARITVRPELDPGGPANAIPGVTFELSRDDQEVPLRQVNQGSQACVFSDLEPGW
                     VTLRIVAPTQYKGSSVTLADETDEVSVGLAAGDDIDLSPRFRFRYDTGEIRGRVVDSD
                     KNPVPNIKLVASSNGLVTDVDSDSAGRYKLTGLRVGTWTIMLDQSTVDYDGQTLTADP
                     SEQAVTVQAGKTTRAKRFTLKSDEHGIKGHVRDSQGNPLPYAIVEIRNQQMKILDTVV
                     ADDQGAYSWKSESPGMFVVNLLKEDGETVQRQVVTVNSWATADLVSTDAVPRLLRLAL
                     NEAGTNQPGNGGPNGPTAGSASATGGHGDGTSVREAVTDLAAYPVLTEEVST"
BASE COUNT          240 a          370 c          369 g          181 t
ORIGIN      
        1 cgacggcaat gtctatgcga tctggccagc cgatgacgtg caggtggagc cgcaggagat
       61 tgcgaacctc ataccgctgc agtccagttt catcacacga acccagcagc cacaggaacc
      121 catcgtggtc gagtaccggc cgatgcgggc tcgcatcacg gtcaggcccg aactggaccc
      181 gggtggcccg gcaaatgcca tcccaggggt caccttcgag ctcagccggg acgatcaaga
      241 ggtgccgctg cggcaggtca accagggctc gcaagcgtgc gttttcagcg atctggagcc
      301 cggctgggtc accctccgga tcgtcgctcc gacgcagtac aagggcagct cggtcacctt
      361 ggccgatgaa acagacgagg tgtcggtcgg gctggcggcc ggcgacgaca tcgacctgtc
      421 cccgcgcttc cggttcaggt atgacaccgg agaaatacgc ggccgcgtcg tcgactccga
      481 caagaatccc gttccgaaca tcaagctcgt ggccagctcg aatggcctgg taacggacgt
      541 ggattccgat tcggccggac ggtacaagct caccggcctc agggtcggca cgtggaccat
      601 aatgctggac cagtcgaccg tggattatga cggccagacc ctcaccgccg atccttccga
      661 acaagccgtc acggtgcagg ccggtaagac aacgagggca aagcgattca ccttgaaatc
      721 agatgagcac ggcatcaagg gacacgttcg ggatagtcag ggaaatccac tcccctacgc
      781 cattgtggag atccggaacc agcagatgaa gatccttgac acggtcgtgg ccgatgatca
      841 gggcgcttac tcgtggaaga gcgagtcccc cggcatgttc gtggtgaacc tcctcaagga
      901 ggatggcgag acagtccagc gccaggtggt cacggtgaac tcctgggcca ccgcggacct
      961 ggtgtccacg gatgccgtac cgcgactgct gcggctggcg ctcaatgaag ccggcacaaa
     1021 tcagccggga aatggggggc ccaatggccc caccgccggc tctgccagcg ccaccggcgg
     1081 ccacggcgac ggcacctcgg tgcgtgaggc cgtcaccgac cttgccgcgt acccggtgct
     1141 gaccgaggag gtcagcacca
//
LOCUS       DASRPQ010001540         1627 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4572813, whole genome shotgun sequence.
ACCESSION   DASRPQ010001540 DASRPQ010000000
VERSION     DASRPQ010001540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4572813"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(237..1375)
                     /locus_tag="VFD73_17575"
     CDS             complement(join(237..940,940..1375))
                     /locus_tag="VFD73_17575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611351.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI75793.1"
                     /translation="MAKKHRVTLTADERDELEWLLARGKADVRKIKHAQILLKADEAD
                     GGPGWPDARIAEAFEAGIATVERVRQRFVEEGLASALSPYRAGKRISTRKLDGAQEAH
                     LIALACSAPPDGQARWTLRLLAQHMVELAYVDTLSHETVRQTLKKNALKPHQRRMWCI
                     PEKPSAEFVYCMEDVLEVYHRPYDPKRPVVCVDETFKQLIGETREPLPMRAGSVERVD
                     YVYTRNGVASLFLACEPLAGWRHIAVTDHRRRTDWALFIRALLEGRYRDAEKLVLVMD
                     QLNTHSPASLYEAFPPEEAKRLADRLEIHHTPKHGSWLNQAEIELSVLARQCLSRRIA
                     HQDTLKRQITGWEERRNAARPQIKWQFTTQDARIKLVSLYPSVHA"
BASE COUNT          288 a          512 c          508 g          319 t
ORIGIN      
        1 gagatcgcga tctggaactc ctcccagacc cactgggtca gatcgatcaa ccgccagcgc
       61 accacgccgt gaacagacgg gatcgggccc gcgtcgatcc gggcgacgag cgctgcccga
      121 tgcgtgtcgg tgagcttaga gcgtttccgg tttagacgga accacacgga cgagcgcgtc
      181 cttcgcctca aaagttttac tgggtccgtg aaagtcggaa ttgctctagt cctcggtcag
      241 gcatgaactg aggggtagag gcttacgagt ttgatccggg catcttgggt tgtgaactgc
      301 catttgattt gaggcctggc ggcgttgcgc ctctcctccc agcctgtgat ctggcgcttc
      361 agggtgtcct gatgggcgat gcggcgcgac aggcactgac gcgcaaggac gcttagctcg
      421 atctcagcct ggttcagcca cgagccgtgc ttgggcgtgt ggtggatctc aaggcggtcg
      481 gctaaccgct tggcctcctc cggcgggaac gcctcataga ggctggccgg ggaatgggtg
      541 ttgagttggt ccatgaccag caccagcttc tcggcgtccc gatagcgccc ttccagcagc
      601 gcgcggatga acaaggccca gtccgttcga cggcgatggt ccgtcaccgc gatatggcgc
      661 cagcctgcga gtggttcgca ggccagaaac aggctcgcca cgccattgcg ggtataaacg
      721 tagtcgacgc gctcgaccga acccgctcgc atcggtagcg gctctcttgt ctcgccgatc
      781 agttgtttga aggtctcgtc cacgcacacc acgggccgct tggggtcgta ggggcgatga
      841 tagacctcga gcacgtcctc catgcagtag acgaactccg ccgagggctt ctcggggatg
      901 caccacatcc gcctctggtg cggcttgagc gcattttttt gagcgtctgg cgcacggtct
      961 cgtgcgagag cgtgtccaca taggccagtt ccaccatgtg ttgggccaga agccgcaacg
     1021 tccagcgcgc ctgtccgtcc ggtggggctg agcaggccag cgcgatcagg tgagcttcct
     1081 gggcaccatc gagcttgcgc gtagagatgc gttttccagc ccggtacggg ctcagggcgg
     1141 aggcgagccc ctcctcgaca aagcgctggc gcacgcgctc gacggtcgcg atcccagcct
     1201 cgaacgcctc ggcaatgcgc gcgtccggcc agcccggtcc gccgtcggcc tcatcggcct
     1261 tgagcaggat ctgagcgtgc ttgatcttgc gaacatcggc cttgccacgc gcaagcagcc
     1321 actccagctc gtcgcgctcg tcagccgtga gcgtcacccg atgcttcttg gccatgaccg
     1381 cctcctcgtc agcacccctg ctgaccaaaa acgctcagac cctcacatca gccctggcag
     1441 accactagag cggtttcgac ttagatagac ccagttgagc ctcggcaccc gagggcgtgc
     1501 agctcgatgt gagttcgtct aactcggaaa tgctctaaca ggccttagcc gtcacgtgta
     1561 acgcaaagcc gttagtatgg acgtgtcaga gtgcgctcaa atgttgagca gcgctgggca
     1621 aatctgc
//
LOCUS       DASRPQ010001541         1027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1450800, whole genome shotgun sequence.
ACCESSION   DASRPQ010001541 DASRPQ010000000
VERSION     DASRPQ010001541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1450800"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..593)
                     /locus_tag="VFD73_17580"
     CDS             complement(<1..593)
                     /locus_tag="VFD73_17580"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HZI75794.1"
                     /translation="MTRPMAHNDTVDAFLDAAERLLISVGYAGVSARRLAEEAGANHG
                     LIHYYFGSMEQVFIRVLERFTDRLIERQRAMYAAPIPFIEKWRAAMGYLDEDRESGYQ
                     KIWLELQALAWNRPELRERLAHVRRQWVATVTEAFGPAMEEYGLDTERFPVAAMVALV
                     ATFNEGIILDRLGGVTEGHAELLEMIDNWLVSLEERK"
     gene            complement(829..>1027)
                     /locus_tag="VFD73_17585"
     CDS             complement(829..>1027)
                     /locus_tag="VFD73_17585"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HZI75795.1"
                     /translation="ASQFAHGPTLAYGATKRLLHQGWSETLETQMMAESQAISAMSAT
                     ADASEGMRAFLAKRQPDFTGK"
BASE COUNT          181 a          326 c          320 g          200 t
ORIGIN      
        1 ttcttgcgct cttcaagcga gaccagccag ttgtcaatca tctccagcag ctccgcgtgc
       61 ccctcggtga cgccgcccag acggtccagg atgatgcctt cgttgaaggt cgccaccaga
      121 gcgaccatcg ccgcgacggg aaagcgctcg gtgtcgaggc cgtactcctc catcgcaggg
      181 ccaaacgctt cggtgacggt ggcgacccac tggcgcctca cgtgcgccag ccgctcacgc
      241 agctccgggc ggttccaggc gagggcctgt aactccagcc agatcttctg gtagccgctc
      301 tcgcggtctt cgtcgaggta gcccatcgcg gcgcgccatt tctcgataaa tgggatcggc
      361 gcggcgtaca tcgcgcgctg ccgttcgatc agccggtcgg tgaagcgttc cagcacacgg
      421 atgaagacct gctccatcga gccgaagtag tagtggatca gcccgtggtt cgcgcccgcc
      481 tcctccgcca gccgccgcgc ggagacgccc gcatagccga cgctgatgag cagccgctcg
      541 gcggcgtcga gaaatgcgtc tacggtgtcg ttgtgcgcca ttggtcgggt catgagaact
      601 ccctgcgacc gactattcgg gtggcttata cgagtgtata aaccatatga ctaattttgt
      661 caagagccag tttccgcgac ctgcgatcaa tgtgagcgac tacacacgta ttcgagagga
      721 tgcgtgaaat gtagcagagg taagacgttc tttagtagcg atggtgagag ttccccgaac
      781 ctcacccctc agacccctct cccaccagga gagggggagc cagaggcgct acttcccggt
      841 gaagtctggc tggcgtttgg cgaggaaggc gcgcatgccc tcgctggcgt ccgccgtggc
      901 cgacatcgct gagatagcct ggctctcggc catcatctgt gtctccagcg tttccgacca
      961 tccctggtgg agcaggcgtt tggtggcgcc gtaggccagc gtcggcccgt gggcaaactg
     1021 gctggcg
//
LOCUS       DASRPQ010001542         1065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2086755, whole genome shotgun sequence.
ACCESSION   DASRPQ010001542 DASRPQ010000000
VERSION     DASRPQ010001542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2086755"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..546)
                     /locus_tag="VFD73_17590"
     CDS             complement(40..546)
                     /locus_tag="VFD73_17590"
                     /inference="COORDINATES: protein motif:HMM:NF012753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HZI75796.1"
                     /translation="MSDDEKLDQRIQLVASASFGKDVDDWRRTQQDLPSRSEAIRRLV
                     YLGLQHDEEHPMRMITAIIRPHRYEAVRDALTKLGVSGITATQVQGFGRQRGQTEMYR
                     GAEYSVAEVPKMKVEVAVASGMAETVIEAIQKAAGSGKIGDGKIFVTGLTEVVRIRTG
                     ERDEKALD"
BASE COUNT          172 a          395 c          289 g          209 t
ORIGIN      
        1 ctggctggtt tggcgactct tgagcgtgcc gttccggcgc tagtcgagcg ccttctcgtc
       61 ccgctcgccc gtgcggatac gcacgacttc ggtcagcccg gtcacgaaga tcttcccatc
      121 gccgatcttg cccgagcctg ccgccttctg gatcgcctcg atcaccgtct ccgccatgcc
      181 ggatgcgacc gccacttcca ccttcatctt cggcacttcg gcgaccgaat actccgcccc
      241 gcgatacatc tccgtctgcc cgcgctggcg gccgaagccc tgcacctgcg tcgccgtgat
      301 ccccgaaacg cctagcttgg tcagcgcatc cctcaccgcc tcatacctgt gcggccggat
      361 gatcgcggtg atcatgcgca tcggatgctc ctcatcgtgc tgcagcccca ggtagaccag
      421 ccgtcgaatg gcctccgacc ggctcggcag gtcctgctgc gtgcgccgcc agtcgtccac
      481 gtccttcccg aagctggccg aggccaccag ctggatgcgc tgatcgagct tttcgtcatc
      541 gctcaagaaa tcccgctcct gcggctgagt cagcaagtcg gtagcacaag ttacacacct
      601 cggaccagca gtcagctcac acccccaacc ccgctcatcc ctaccctcct ggaagcggac
      661 cttggtccgc gttccccgcg aaggcgggga tccaggggct ccgagttcaa atggttggcg
      721 tagcccgaac gctccgggcg cgatcaacgc gttcggcccc cggatccccg ccttcgcggg
      781 gaacgctgcc tgaaggccgc ttccagatcc cttcgtttcc aatgccgatt gagttggggg
      841 tcggccaaaa ggttaattcc gggccttaac cttaccccgc ccgtctcaac cggaaaatta
      901 ccttgctccg gtatggtcac cctgaactca agaattgggt gggcctgtag aatgcacgat
      961 ccccggaaac cccgtccgct gaagccgcgg acgctctcgg tcctggtggc tgacgcgaac
     1021 aacttctcgc gcggcctcat cggcgagatc ctgcgctccc tcaac
//
LOCUS       DASRPQ010001543         1026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1113123, whole genome shotgun sequence.
ACCESSION   DASRPQ010001543 DASRPQ010000000
VERSION     DASRPQ010001543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1113123"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..840
                     /locus_tag="VFD73_17595"
     CDS             <1..840
                     /locus_tag="VFD73_17595"
                     /inference="COORDINATES: protein motif:HMM:NF023950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3734 domain-containing protein"
                     /protein_id="HZI75797.1"
                     /translation="PNPYLAVPGAAGATSFYDTTPLRGTLERLASFDLVNAGPTRLSL
                     GATKVVSGEVVFFDNTHQAIGPEHVMASGSLPPGFPAMAVDGELYWDGGCVSNTPLEA
                     VLQDQPAGHTIVFMIDLWAAQGAVPRTMDEVLWRQKQIQYASRTAQHIDAVATKLNLR
                     RALNQHQAAPQLAGAVDPAVAGEVALQDARMDIVHITYQPTADQISSSDAEFSRRSIA
                     ARRDAGYRDLKQALREAPWFTHDKPEALCALVHKVKDGEVTTLSAIQLTTSGGATMKR
                     SAA"
BASE COUNT          180 a          334 c          332 g          180 t
ORIGIN      
        1 cccaacccgt acctcgcggt tcccggagcc gcaggggcga ccagctttta tgacaccacg
       61 cccctgcgcg gcaccctgga gcggctggcc agcttcgatc tggtcaatgc cggcccgacc
      121 cggctcagct tgggggcgac caaggtggtg agtggcgagg tcgtcttctt cgacaacacg
      181 caccaggcga tcggcccgga gcatgtcatg gccagtggct ccctgccgcc cggctttccc
      241 gccatggcgg tggacggtga gctgtactgg gatggcggct gcgtctccaa tactccgttg
      301 gaagcggtgc tgcaggatca gccggccggg cacacgatcg tgttcatgat cgatctgtgg
      361 gcggcccagg gcgcggtgcc gcgcaccatg gatgaggtgc tgtggcgcca gaaacagatc
      421 cagtatgcca gccgcaccgc gcagcacatc gacgcggtcg ccaccaagct caacctccga
      481 cgcgcgctca accagcacca ggccgcaccc cagcttgccg gtgcggttga cccggcggta
      541 gccggcgagg tggccttgca ggatgcgcgg atggacatcg tccacatcac ctaccagccg
      601 accgctgatc agatttcgtc gagcgacgcc gagttctcgc ggcgttccat cgcggcgcgt
      661 cgggatgccg gttaccggga cctgaagcaa gcgttgcggg aggcgccgtg gttcacgcac
      721 gacaaaccgg aagccctgtg tgctctggtc cataaggtca aggatggtga ggtcacgacc
      781 ctttctgcta tccagctgac caccagcggc ggcgccacga tgaagcggtc ggcggcataa
      841 cgcagcacca ggatggggag tggacgtgta gtccgtactg aaagggagtc gggtgccttc
      901 ctatgtgcgg gaggtactca atagcacggc ccccagcgtc cactccaaac ctaatgcttt
      961 ctggtccctt gacggcctga tcaaaggtcc cgtttaggac acagtctcca gttctgtctc
     1021 gcgtcg
//
LOCUS       DASRPQ010001544         3828 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_489142, whole genome shotgun sequence.
ACCESSION   DASRPQ010001544 DASRPQ010000000
VERSION     DASRPQ010001544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3828
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_489142"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..2375)
                     /locus_tag="VFD73_17600"
     CDS             complement(93..2375)
                     /locus_tag="VFD73_17600"
                     /inference="COORDINATES: protein motif:HMM:NF013727.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HZI75798.1"
                     /translation="MSTDSRRRLGAITALVLGLFVGLTLLPIPITGPVGRSMGHGLWQ
                     VLGAGAIGIPLLGVGLALAGFDRLGSLDMKRSAILIIGLSVLLPFLLGVLARIGPADF
                     DLDVGQRSFAARLVGVLPGFFAASVAGKVGVAGAVLLGFLALSALTLATFAWHPLQRL
                     EKGREAGKRGSGEALDDQPASRSSRSRKPRAETAAESEAADNSAVLVTPSPLVRTAAE
                     PRPRKERKNKRGNSADDAALIDEESDLPPVDLLTAPSDQDIDAGEAQLDRLGESLIDT
                     LRTFKVDGRRGPRTTGPVVTQFEVVPAPGVKAGRIGALADDLAIAMRVPSVRVAPIPG
                     KGAVGVEIPNPVARIVTLRELIESEEWQGRRAVLPIALGHDLEGKPVIADLTKMPHLL
                     IAGATGTGKSVTINTIITSLIYRYTQKHLRFLMIDPKMVELSMYNALPHLRHKVVTNN
                     HDAATVLKWAVMEMQRRYELLQANGARNIADFNRKVEEGKPLRNPPRPKPTLTSLSAE
                     PPDTPPKDPVDEVYQEGVLPFVVMIIDELADLMMTVQGEMETPLAILAQKARAIGIHL
                     ILATQRPSVNVITGLIKANFPSRIAFRVASKVDSRTILDQNGAEALLGNGDMLFLPPG
                     KSEPMRLQGAYISTDESERVMEWYVGRRAARRAAHEAAEAQEADILELVRAQEGEGEP
                     GGEASEGERDPLFREAAEACLQNLGGSTSLLQRRLRIGYGRAARIIDQLHYAGILGPP
                     DGSKPRDVLIGFDQLDEYCK"
     gene            complement(2372..3115)
                     /locus_tag="VFD73_17605"
     CDS             complement(2372..3115)
                     /locus_tag="VFD73_17605"
                     /inference="COORDINATES: protein motif:HMM:NF015962.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-phosphosulfolactate phosphatase"
                     /protein_id="HZI75799.1"
                     /translation="MRVDVFFTPAGLSPAEVQGRAIFVIDILRATTTMCAALSHGAKA
                     IIPVASTEEALRLSQTIGSTDVILAGEQNCLKIPGFQLGNSPLEMSEVTVRGKTIIVS
                     TSNGTKALLACQGAHSVYPTAAVNLSAAAEKARELRESDQPVAVVCAGRENAFSLDDS
                     YCAGRLVAATLGDRRPRRGLNDAAIACLDLVRRYGDNWRRPLAYSRAGRELIKLGLRA
                     DLLDAARLDAYPVLPHFHERRVTLTPVTV"
     gene            complement(3112..>3828)
                     /locus_tag="VFD73_17610"
     CDS             complement(3112..>3828)
                     /locus_tag="VFD73_17610"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683412.1"
                     /note="an AccC homodimer forms the biotin carboxylase
                     subunit of the acetyl CoA carboxylase, an enzyme that
                     catalyzes the formation of malonyl-CoA, which in turn
                     controls the rate of fatty acid metabolism; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HZI75800.1"
                     /translation="GDLFGKVVHMGERDCSVQRRHQKLIEESPSPALNDELRAQMGQA
                     AVALASNIGYAGAGTLEFLLDPDGKFYFMEMNTRIQVEHPVTEMVTSFDIVKEQIRVA
                     SGEPVSFQGDGRRLRGHAIECRINAEDPYRNFQPSPGLITAYHPPGGPGVRLDTHVYA
                     GYTVPPYYDSLLAKVIVHGNSREEALTRMGQALDSFILEGITTTIPFLARVIRHPDFV
                     SGNVDTRFLERESYLLRPEA"
BASE COUNT          680 a         1238 c         1201 g          709 t
ORIGIN      
        1 cggcgctcgg ggagaacgac gctcccgact cacggcaacg gtgcgaacgc cggccgatgc
       61 ctcggtcgga tcagagtgac agctctcgcg attcacttgc agtactcgtc gagctgatcg
      121 aacccgatca aaacatcccg cggcttgctt ccatcagggg ggcccagaat tccagcgtag
      181 tgcaactggt cgatgatccg ggcagcacgg ccgtagccga tgcggagccg ccgctgcagc
      241 aaggaggtgg aacccccaag attttgcagg cacgcttcgg ccgcctcgcg gaagagcggg
      301 tctcgttctc cttctgaagc ctcaccccct ggctcaccct ccccttcctg tgcccgcacc
      361 agctcgagaa tgtcggcttc ctgcgcctcg gccgcctcgt gtgctgcccg ccgggcagcc
      421 cgacgcccga cataccactc catcacccgc tcggactcgt cggtgctgat gtaggccccc
      481 tggagccgca tgggctcgct ctttcccggt gggaggaaga gcatgtcacc gttgcccaga
      541 agcgcttccg ccccgttctg gtccaggatg gtccggctgt caactttcga tgccaccctg
      601 aacgcaatac ggctggggaa gttcgccttt atgagaccgg tgatcacgtt cacggagggc
      661 cgctgcgtcg cgaggatcag gtggattcca atggcccggg ccttctgcgc aagaatggcg
      721 agcggcgtct ccatctcacc ctgcaccgtc atcatcagat cggccagctc atcgatgatc
      781 atcacgacga aggggagcac tccctcctgg tacacctcgt caaccggatc cttgggaggc
      841 gtgtctggtg gctccgcgct caaggacgtc agggtcggct tgggccgtgg cgggtttctc
      901 agcggctttc cttcttccac cttgcgattg aagtcggcga tgttgcgcgc cccgttggcc
      961 tggagcagct catagcggcg ctgcatctcc atgaccgccc acttcagcac tgtggcggca
     1021 tcatggttgt tggttaccac cttgtggcgg agatggggaa gcgcgttgta catcgacagc
     1081 tccaccatct tcgggtcgat catcaggaac cggaggtgct tctgggtgta gcgatagatc
     1141 aggctggtga tgatggtgtt gatcgtaacc gattttccgg tgccggtggc tccggcaatc
     1201 agcaggtgcg gcatcttggt caggtcggcg atgaccggct tgccttcgag atcgtgtccc
     1261 aaggcaatcg gcagcaccgc acggcggcct tgccactcct ccgactcgat gagctctctc
     1321 aaagtgacga tgcgggcgac cggattggga atctcaaccc caactgcgcc cttgccgggg
     1381 atgggcgcga ctcgcaccga gggaacccgc attgcaatgg ccaggtcgtc agccagcgcg
     1441 cctatgcgac cggccttgac gccgggagcc ggaaccactt cgaactgggt aaccactggg
     1501 ccggtggtcc ggggtcccct gcggccatcg accttgaatg tccgaagcgt gtcgatcagg
     1561 gattcgccca aacgatccag ctgggcttct ccggcatcga tgtcctggtc ggaaggagcg
     1621 gtaagaagat cgaccggcgg caaatcggat tcttcatcaa tgagagcagc gtcgtctgct
     1681 gaattaccgc gcttgttctt gcgctccttg cgaggacgcg gctcagccgc agtccggacc
     1741 agcggactcg gtgtaaccag gactgcggaa ttgtcggcgg cctcggattc tgccgctgtt
     1801 tcggctcgcg gcttcctgga tcttgaggat cggctggctg gctgatcatc gagcgcttct
     1861 ccgcttcccc gctttcccgc ttcccgaccc ttttccagcc gttgcagcgg gtgccaggcg
     1921 aaggtggcca gcgttagcgc cgagagtgcc aggaacccca gcagcacggc gccggcaact
     1981 cccacctttc cggccacgga tgctgcaaag aacccgggaa gcacgccgac gagccgagca
     2041 gcaaacgacc gttgaccgac atccagatcg aagtcggccg gaccgattcg ggcgagcaca
     2101 ccgagcagaa acggaagcag gacgctcaaa ccgatgatga gaatggccga acgcttcatg
     2161 tccaggctgc ccagccggtc gaaacccgcc agcgccaggc cgacacccaa cagcggtatt
     2221 ccaatggcac cggcgccgag gacctgccag agaccgtgtc ccatgctgcg gccgaccggt
     2281 ccggtgatcg ggatcggcag gagcgtgagc ccaacaaaca gacccagcac cagagcggtg
     2341 atggccccga gccggcgacg cgagtcggtg ctcataccgt taccggcgtc agagtgacgc
     2401 gtcgctcgtg gaagtgaggc agcacggggt aggcgtccag gcgagcagcg tccagcaggt
     2461 cggccctgag gcccagcttg atcagctctc tgccggcccg gctgtaggcc aggggccgtc
     2521 tccagttatc gccgtagcgc cgcaccagat cgaggcaggc gatcgccgca tcgttgaggc
     2581 cccggcgggg tcgccggtct cccagcgtgg ccgccaccag gcgaccggca cagtacgagt
     2641 catccagtga aaacgcgttc tcccggccgg cacacacgac agcaactggc tggtcggact
     2701 ccctgagctc gcgggctttc tcagcggcgg cggacagatt gacggccgcg gtgggataga
     2761 ccgagtgggc gccctggcag gccaggagcg ccttggtgcc gttactggtg ctcacgatga
     2821 tcgttttgcc ccgcacggtc acttcgctca tttcgagcgg gctgttcccc agctgaaacc
     2881 cgggaatctt gagacagttc tgttccccgg ccaggatcac gtcggtgctg ccgatcgtct
     2941 gtgagagccg gagcgcctcc tcggtcgagg ccaccggaat gatcgccttg gcgccgtgac
     3001 tgagagccgc gcacatcgtg gtcgtcgcgc gcagaatgtc gatcacgaaa atggctcgcc
     3061 cctgcacctc tgccgggctc agtcctgccg gggtgaaaaa gacgtcgact ctcatgcttc
     3121 gggccgcagg aggtacgatt cccgttcgag gaagcgggta tcgacattgc cggaaacgaa
     3181 gtcgggatgc cggatgactc gcgccaggaa tggaatcgtc gtggtgatcc cctccaggat
     3241 aaagctgtcg agggcctgcc ccatgcgggt gagcgcctct tcccgcgagt tcccatgcac
     3301 gatgaccttc gccaagagcg aatcgtagta gggcggtacg gtatatcccg cgtatacgtg
     3361 ggtatccagc cggacgccgg ggcctccggg aggatggtag gcagtgatca gtccgggcga
     3421 aggctggaaa ttgcggtagg gatcctccgc gttgatccgg cactcgatgg catgcccgcg
     3481 tagccgccgt ccatcgccct gaaagctcac cggctccccc gatgccaccc ggatctgttc
     3541 cttgacgata tcgaagctgg tcaccatctc cgtcaccgga tgttccacct gaatccgggt
     3601 gttcatttcc atgaagtaga atttgccgtc cggatcgagc agaaattcca gggttccagc
     3661 tcccgcatac ccgatattcg aggccagcgc gaccgcggct tggcccatct gcgctcgcag
     3721 ttcgtcgttc agagcgggac tcgggctctc ttcgatgagc ttctgatgac gccgctgcac
     3781 cgagcagtcg cgctcaccca tatgaacgac cttcccgaac aggtcgcc
//
LOCUS       DASRPQ010001545         1384 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3347984, whole genome shotgun sequence.
ACCESSION   DASRPQ010001545 DASRPQ010000000
VERSION     DASRPQ010001545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1384
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3347984"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..451)
                     /locus_tag="VFD73_17615"
     CDS             complement(<1..451)
                     /locus_tag="VFD73_17615"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HZI75801.1"
                     /translation="MFTIALVCQKGGAGKTTLAVHLAIETQRRGLRTLLLDLDAQASA
                     SKILGRRGDDPPDFDTEHPARLEESLTTAATEGYELVVLDTAPQADQAALRAARAADM
                     VIVPVRPTIVDIDAVQTTMDISALAKRSPIFVLNAVTPQGREAAEARA"
     gene            570..1043
                     /locus_tag="VFD73_17620"
     CDS             570..1043
                     /locus_tag="VFD73_17620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75802.1"
                     /translation="MTQSAIEQATPLCGPHVRYARMEGVTMAEWLTKAVETEAQKQEG
                     NQVIPPGRPRETSLPSPTIELHDAASALQAVAVAAQAGLPVTKAAVRDTVGLIREQVR
                     VCRGLPMRQTSRPIGQTRRLDHETPEMEPLVPGDAADAVVPEPVTRNGAGDSPEA"
BASE COUNT          255 a          412 c          475 g          242 t
ORIGIN      
        1 tcgcccgcgc ctctgccgct tccctaccct gcggtgtcac ggcgtttagg acgaagatgg
       61 gcgagcgctt cgccagcgcg ctgatgtcca ttgtggtctg caccgcatcg atatccacaa
      121 tagtcggacg gaccgggacg atgaccatgt ctgccgctcg cgctgcccgc agcgctgcct
      181 gatcggcctg aggggctgtg tccaacacga ccagttcata gccttcggtt gccgccgtcg
      241 tcaggctttc ctcaagccga gcggggtgtt cggtgtcaaa gtcgggtgga tcatcaccgc
      301 gacggccgag gatctttgat gccgatgcct gagcatccag atcgagcagc agtgtgcgaa
      361 ggccccgtct ctgggtctcg atcgcgagat ggaccgccag tgtcgtcttc cctgcgccgc
      421 ctttttggca gacaagtgcg attgtaaaca cggtggctcc tttacgagtg gccggtgcaa
      481 cgtgtttaca cgtaatcgag tgtgaatggc aacgggttgt gatgtatgac tgtcgtctat
      541 agatctagtt ttccgctgcc gtcggcggtt tgacccaaag cgcaatcgag caggctacgc
      601 cgctctgcgg gccacatgtc cgctacgccc ggatggaggg cgtcacgatg gccgagtggc
      661 tgacgaaagc cgttgagacg gaggcgcaaa agcaggaggg aaaccaggtc ataccgccgg
      721 gcagaccgag ggagacctcc ctcccctccc cgactatcga gcttcatgat gcagcttccg
      781 ccttgcaggc ggtggccgtg gcggcgcagg ccgggctgcc ggtgaccaag gccgcggtgc
      841 gcgataccgt gggcctgatc cgcgaacagg tccgggtttg ccggggtctg cccatgaggc
      901 aaaccagcag gccgatcggg caaaccaggc ggcttgacca cgagacgccg gagatggaac
      961 cactggtgcc gggtgatgcg gcggacgcag tggtgccgga accggttacg cgtaacggcg
     1021 cgggcgacag tccggaggcg tgagcggcac tgccctgtca ggggcgtgcc gttatgcgta
     1081 acggacaggc gccggtagcg gcgggaaagc ggccgcgggg aggcgtgaca gagggctctg
     1141 ggacactagc cgttgtgcgg acatgaggga tactaaacca gatatagaca tggcctttgc
     1201 cgggcctggg agggcccctg cacggcgttt caccacgaac ctaccccaaa aaccactgtc
     1261 cggggcggca aagcggctca gggcgcgccg taagggcgtg cggcacggtt cttacgagaa
     1321 gcggacgatt gggaacggca acggaccggg agcaattagg aaaccaggcg ctcctcctcc
     1381 tccg
//
LOCUS       DASRPQ010001546         1249 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2088157, whole genome shotgun sequence.
ACCESSION   DASRPQ010001546 DASRPQ010000000
VERSION     DASRPQ010001546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1249
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2088157"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1249)
                     /locus_tag="VFD73_17625"
     CDS             complement(<1..>1249)
                     /locus_tag="VFD73_17625"
                     /inference="COORDINATES: protein motif:HMM:NF042569.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="isocitrate dehydrogenase kinase/phosphatase AceK
                     regulatory subunit"
                     /protein_id="HZI75803.1"
                     /translation="GPAVAAIHSAYAEYERGFEEITGRARARFEQRDWLGAQADARDR
                     LELYKTHVNAAVADVRDILEDAVMERTVWAAMKSEHQARIANRAGAELAETFFNSVTR
                     RVFSTVGVDSTIEYLSDSGAPARSDGPPIYSSYPTRHVEAGLIREILLACNWSVPYAQ
                     LERDAFLVAELIEIRARRTVPADEPIRLEMLRSVFYRNKGAYLVGRIQAGSETIPLVL
                     PLLHAERGIVVDAVLMSSDEASVVFGFSWTYFRVDTPRPRALVEFLQSIMPLKQVHEL
                     YTSIGYNKHGKTELYRGLMNHLEDSEARFAFVQGDEGMVMAVFTLPSFNVVFKIIKDT
                     FGAPKNTTRRAVMDKYHFVFVRDRVGRLADAQEFEHLEFPRRCFPPDLLEYLLRVAGS
                     TVRAEDDRVIVRHLYTERRVTPLN"
BASE COUNT          228 a          405 c          392 g          224 t
ORIGIN      
        1 attgagcgga gtgacccggc gctcggtgta gaggtggcgg acgatcaccc ggtcgtcctc
       61 cgctcgcacg gtagacccgg ccacccggag cagatactcc aacagatcgg gcggaaaaca
      121 gcgacggggg aactccaggt gctcgaactc ctgagcatcg gccagacgcc cgacccggtc
      181 gcggacaaac acgaagtgat atttgtccat caccgcccgg cgcgtcgtgt tcttgggcgc
      241 cccaaaggtg tccttgatga tcttgaagac cacattgaag gagggcaggg tgaatacggc
      301 catcaccatg ccttcgtcgc cctgcacaaa ggcaaaccgc gcttcggagt cttccaggtg
      361 attcatcaag ccgcggtaga gctcggtctt tccgtgcttg ttgtagccga tggaggtata
      421 gagctcgtgc acctgcttga gcggcatgat cgactggaga aattcgacta acgcccgagg
      481 gcggggagtg tctacccgga agtaggtcca gctgaaaccg aagaccacgc tggcttcatc
      541 cgagctcatc agtaccgcat caaccacaat tccgcgctcg gcgtggagta agggcagcac
      601 cagcggtatg gtttcggagc cggcctggat tcgcccgacc aggtatgctc ccttgttccg
      661 gtagaagacg gaccgcagca tctccagccg gatcggctcg tccgccggca ctgtccggcg
      721 tgctctgatc tcgatgagct cggcgaccag gaacgcgtct cgctccagct gcgcgtaggg
      781 gaccgaccag ttgcaggcca gcagaatctc ccggatcagt ccggcctcga cgtgacgggt
      841 tggatagctg ctgtaaatcg gcggaccgtc ggatcgggcg ggcgctccgg agtcgctcag
      901 gtactcgatg gtggaatcga ctcccaccgt gctgaacacc cggcgggtca ccgaattgaa
      961 gaacgtctcc gccagctcgg ctccggcccg attggcgatc cgggcctggt gctccgactt
     1021 cattgccgcc cagaccgtcc gctccatcac cgcgtcttcc agaatgtcgc gcacgtccgc
     1081 gaccgctgcg ttgacgtgcg tcttgtacag ctccaggcgg tcgcgggcat cggcctgagc
     1141 gccgagccag tcgcgctgct cgaagcgcgc gcgcgcccgt ccggtgatct cttcgaaccc
     1201 ccgctcgtac tcggcatacg ccgagtgaat ggcggccacc gccgggccg
//
LOCUS       DASRPQ010001547         1104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4574881, whole genome shotgun sequence.
ACCESSION   DASRPQ010001547 DASRPQ010000000
VERSION     DASRPQ010001547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4574881"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..709
                     /locus_tag="VFD73_17630"
     CDS             <1..709
                     /locus_tag="VFD73_17630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75804.1"
                     /translation="LGNFCGNSGCDLRAPGADARKFADTVEKYLGPDHLRILKRVLVN
                     GGDAKDLPTASNIIDAVELLRQARETDTVVLFIAGHGINEGPSYRFLPTDAAWMDGAL
                     RGSSVVPWQVLQEAVEAAKGRRLLFVDTCHSGNAYNQRLGNAAYHANIIAYTSARFDQ
                     EALEDPRLGHGLFTYAVVEGLEGKAGVPSKGQLTTKDLAEYVVGRVGALARGMRAEQE
                     PQYFKGRDAQDYILARR"
     gene            complement(884..>1104)
                     /locus_tag="VFD73_17635"
     CDS             complement(884..>1104)
                     /locus_tag="VFD73_17635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75805.1"
                     /translation="ALAIVLMLVAPGVPWAQDQAQSAKSRPTQARGAVKNRQTSTQPR
                     GYRAEAAPRTCGEFMYWKAGKCNDARNK"
BASE COUNT          199 a          346 c          365 g          194 t
ORIGIN      
        1 tctcgggaat ttctgcggca attccggttg tgatctgcgt gcgcccggtg ccgacgcgcg
       61 caagttcgcc gatacggtgg agaagtactt aggccccgat cacctgcgca tcctcaagcg
      121 tgtgctggtc aacggcgggg atgccaagga cctgccgacc gccagcaaca tcatcgatgc
      181 ggtggagctg ctgcggcagg cgcgtgagac cgacaccgtc gtcctcttca ttgccgggca
      241 cgggatcaac gaggggccga gctaccgctt tctgccgacc gacgcggcct ggatggacgg
      301 tgccctgcgc ggctctagcg ttgtgccatg gcaggtcctg caggaggcgg ttgaggccgc
      361 caagggtagg cggctcctgt tcgtcgacac ctgccactca ggaaacgcct acaaccagcg
      421 gctgggcaac gctgcctatc acgccaacat catcgcctac acgtccgccc gtttcgatca
      481 ggaggcgctg gaggacccca ggctcgggca cggtctcttc acctatgccg tggtcgaggg
      541 cctcgagggc aaggctgggg tccccagcaa gggccagctg accactaagg acttggccga
      601 atacgtggtc ggccgggttg gcgcattggc aagggggatg cgcgcggagc aggagcccca
      661 atatttcaag ggccgtgacg ctcaggacta cattctggcg cggcgatgat cacacgatgc
      721 tgcgctaccg ccgtcggcgc gctgcccgca acaggctagc gatgccgaaa acggaggtgg
      781 atctcacgcg cccagaccct ccgtgctgat cccgctcggt gggcgacggt taatcgacgt
      841 cgcagcgtct agggagagtg gtcgatgcgc aaacccgcaa acactacttg ttgcgagcgt
      901 cgttgcactt gccagccttc cagtacatga actcaccgca agtgcggggg gcagcctcgg
      961 cccggtagcc ccgaggctgc gtcgaagttt gccggttttt tacggcgcct cgagcctgag
     1021 tgggtcggga tttagccgat tgtgcctgat cttgcgccca ggggacgccc ggcgccacaa
     1081 gcatgagcac aatcgcaaga gcaa
//
LOCUS       DASRPQ010001548         1102 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3348811, whole genome shotgun sequence.
ACCESSION   DASRPQ010001548 DASRPQ010000000
VERSION     DASRPQ010001548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3348811"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..375
                     /locus_tag="VFD73_17640"
     CDS             <1..375
                     /locus_tag="VFD73_17640"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HZI75806.1"
                     /translation="FLCLKNAGQSGVLWPVVVSRTAGTVVAVAIALAAGVRPWRRTRP
                     GLRGHGAGAIALASGAVDAAANVCYVLATRAGLFGLAVVITALYPGMTVLLARWVLGE
                     RMRWLQRAGLLLAAAGVVLLTT"
     gene            complement(372..899)
                     /locus_tag="VFD73_17645"
     CDS             complement(372..899)
                     /locus_tag="VFD73_17645"
                     /inference="COORDINATES: protein motif:HMM:NF015648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HZI75807.1"
                     /translation="MRLAPSTDTVPASVNRFLLPHERQVITVHQHPAVLIRPIFEVLV
                     GLAIAGWLTVAVAKNNGLAVLIIWILWGLVFLHLVIRVIEWVETYFVVTSQRFLLATG
                     LITRQVKMMPLAKVTDMTFERSAWGRILGYGEFIIESAGQNQALERVKHLPYPEQLYL
                     EVCGLLFKDTGDGGD"
     gene            complement(918..>1102)
                     /locus_tag="VFD73_17650"
     CDS             complement(918..>1102)
                     /locus_tag="VFD73_17650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75808.1"
                     /translation="QVWAPVGGDVNAKTLMGWVAIAFVVWWVIEEPASAAHLVHNIGA
                     FLSTAAHGLSSFVTSV"
BASE COUNT          198 a          352 c          360 g          192 t
ORIGIN      
        1 ttcctctgcc tgaagaacgc cgggcagtcc ggcgtgctgt ggccggtagt ggtctcgcgc
       61 accgcgggca ccgtcgtggc cgtggccatc gcgctggccg ctggggtccg cccgtggcgg
      121 cggacccggc cagggctcag gggtcatggg gcaggtgcca tcgcgctggc ctcgggagcg
      181 gtcgacgcgg ccgccaacgt ctgctacgtg ctggccacca gggccgggct gttcgggctg
      241 gccgtggtga tcacggcgct ctacccgggc atgaccgtcc tgctggcccg ctgggtcctc
      301 ggcgagcgga tgcgctggct ccagcgcgca gggctgctcc tggccgccgc tggggtagta
      361 ctcctaacta cttaatctcc gccgtcgccg gtgtccttga agaggaggcc gcacacctcg
      421 aggtagagct gctccgggta aggcaggtgc ttgactcgtt cgagcgcctg gttctgccct
      481 gcggactcta tgatgaactc cccgtaaccg aggatacggc cccacgcgga ccgctcgaag
      541 gtcatgtccg tcaccttggc cagcggcatc attttcacct gacgggtgat cagcccggtc
      601 gcgagcaaga accgctgaga ggtgactacg aaataagttt cgacccattc gatgacccgg
      661 atgaccaagt gcaggaaaac gagcccccac aggatccaga taatgagcac ggccaagccg
      721 ttattcttgg cgacggcgac cgttagccag ccggcaatag ccagcccgac gagaacttcg
      781 aaaataggtc tgatcaatac ggccgggtgc tggtggaccg tgatgacctg gcgctcgtga
      841 ggcaggagaa acctgtttac cgaggcagga accgtgtcag tgctcggagc cagcctcata
      901 accagcgcct atcctgctta gaccgacgtc acgaagctgg agaggccgtg ggccgccgtg
      961 gacaggaacg ccccgatgtt gtgtacgaga tgagcggcac tagcaggctc ctcaatgacc
     1021 caccatacga cgaaggcaat tgcgacccac cccatgaggg tcttagcgtt cacgtcgcct
     1081 cccacgggcg cccagacttg tc
//
LOCUS       DASRPQ010001549         1126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2368524, whole genome shotgun sequence.
ACCESSION   DASRPQ010001549 DASRPQ010000000
VERSION     DASRPQ010001549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2368524"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VFD73_17655"
     CDS             <1..192
                     /locus_tag="VFD73_17655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75809.1"
                     /translation="SRPDEESELRSRWVPLRQAVSEVLTGRITNGLAVAGLLAAAAGT
                     GAALARIRPADAPWPGTAQ"
     gene            complement(437..853)
                     /locus_tag="VFD73_17660"
     CDS             complement(437..853)
                     /locus_tag="VFD73_17660"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI75810.1"
                     /translation="MDSPFHDTSMLLSAWRDPNVVRGEEVLVAEMDGRIVGCVTVEDR
                     GRELELVNIDVPRELQGRGIGTMLVRSVEERAGAAGKQAVTAGTSRNAEGVAWKSLPW
                     WQHLGYRVTHEEENPWTRSIGPGVREIRMRKDLPPG"
BASE COUNT          189 a          381 c          346 g          210 t
ORIGIN      
        1 agcaggccgg acgaggaaag cgagctccgg tcgcgctggg ttccgctgcg ccaggcggtg
       61 agcgaggtgc tcaccgggcg catcaccaac ggcctcgctg tagccgggct gctcgccgcc
      121 gcagccggca caggcgctgc cctggcccgg atccggccgg ctgacgcgcc ctggccggga
      181 accgcgcagt gaggaacggc gtcaaccaag ggttgcgctg tgaggtcgtc cggatctgcc
      241 gaaaatagtg tgtgtggtca tgccggaggc ccatagccat gcgtgctccc tgtgatcagc
      301 taaggcgggt acttcagctg tattccttcc cagagatcac gcggaatgcc gaatacgagc
      361 gcctcccagg accgcacctg caacatcgag ggaggcaccg gtatcccttc tgctgttcgg
      421 gttcctgcga atgatctcat ccgggcggga ggtccttccg cattcgtatc tcgcggacac
      481 cgggcccgat tgaccgggtc catgggttct cctcttcgtg ggtgacccgg tacccgaggt
      541 gttgccacca gggaagtgac ttccaagcca cgccttctgc gttccggctc gtgccagcgg
      601 tgactgcctg ctttcctgct gctccggctc gctcttcgac tgaccgcacc agcatcgtgc
      661 cgatccctct gccctgaagc tcgcgcggaa cgtcgatgtt gaccaactcg agttcgcgtc
      721 ctctgtcctc gacggtcacg cagccgacga tccgcccgtc catctcggca accagcacct
      781 cctccccccg cacgacgttg ggatcgcgcc aggccgacag aagcattgac gtgtcatgga
      841 aaggcgagtc catgcctcct ccgaatccga catcttcgtc ggaaaggatg gaggagtttg
      901 atacccacac gattccggga gcatctgccc tggtcgctgg gcgaacatga acatcccaag
      961 cctccgcctg gttcaactgc aacctcctct tggctggccg ccacgccatc ttggtggcat
     1021 gaccgatggg ctggcaacaa gatggtgccc acggagccgc gcacagatca tcggatcgga
     1081 gcctcgcgtc cagctggcca tcacgccagg cgggtcggtg catggt
//
LOCUS       DASRPQ010001550         1486 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_490272, whole genome shotgun sequence.
ACCESSION   DASRPQ010001550 DASRPQ010000000
VERSION     DASRPQ010001550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1486
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_490272"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..430)
                     /locus_tag="VFD73_17665"
     CDS             complement(<1..430)
                     /locus_tag="VFD73_17665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75811.1"
                     /translation="MVRMYHRRAFTASVIVAATLAAGAGLAVTPAATAVAAGAPAAPF
                     TQCPAIGSSPSCEILLVVNADNTVSVVGDPSVGTFDGSDDTLVGIVNDSAAAVKAVTV
                     SGPGSDLSGFDQDGICSGDYGTWTGSSGCSYGPTGYEGPGT"
     gene            complement(1192..1341)
                     /locus_tag="VFD73_17670"
     CDS             complement(1192..1341)
                     /locus_tag="VFD73_17670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75812.1"
                     /translation="MTGVAKSPIGRLVQRHAEQAIREALQDTRVVLVNGARQSGKSTL
                     LRQVP"
BASE COUNT          286 a          484 c          454 g          262 t
ORIGIN      
        1 acgtcccggg tccttcgtat cctgtcggcc cgtacgagca gcctgacgac ccggtccagg
       61 tcccgtagtc gccgctgcag attccgtctt ggtcgaaccc ggacaaatcc gagccaggtc
      121 ctgacacggt gaccgccttc acggccgccg cggagtcgtt gacgatgccg acgagggtgt
      181 cgtcactgcc gtcgaatgtc cctacggaag ggtcgcctac cacgctgaca gtattgtcgg
      241 catttacgac aagcaggatc tcgcaactgg gtgacgaacc tatcgccggg cattgcgtaa
      301 aaggggcggc cggggcgccg gccgcgacgg ccgtcgcggc cggagtgacg gccagtccgg
      361 cgccagctgc cagcgtcgcg gctactatga cgctggccgt aaacgctctc cggtgataca
      421 tcctgaccat gaccaactcc tcttcctggt gttaattcat cacgccgggc gccgctaggg
      481 agcggccagg tgccagcagg tctattcagg cgagcccgat gacagtcggc atcaaggaga
      541 gcgcaggcgg gaatagcatc atccggtggc aatcgagtcg tactcgctaa tgcggtcggc
      601 ctgctcacgt gaattggctc attcgacctt gcgccaatgc gcaccagaga acccccaatg
      661 gctccctcgc ctggcaccgc agatccccac ccgtggcgcc gctgataagg aaaatgagta
      721 tccaccgacg atccttacaa tgccagtaac caagaagcta tgattatgta gcctaaaacc
      781 ggtaaaccgg aagggcgccc gtggcgtccg aaggtttcac cgcagtgatc gcagcgaata
      841 ctcgtcaatg acgtcctatc atttaggaat cttcaacagc ggaagcacgg cacgacttcc
      901 tggcccaggt ccgcgaggtc ggcgaggcgc tgcaacaggt catagacctg ttcaccgggc
      961 ctgttccagt accggcacag agacaggcac caccatcgtg atgttccgct ccggacagga
     1021 catcgacgcg ctcctcccgg ccctccgcag cctgacctgc agggagagac ggcgctggtg
     1081 gtgtccgggg tttctcgtgg gcgacctggg gccagctccg cgctggggcc accctggaca
     1141 gcgactatca gctcactgac gtcggcgacg gcgcggtgca ggtccacgtc gtcaagggac
     1201 ctggcggagc aaggtgctct tcccgctctg ccgcgcgccg ttgacgagga ccacgcgcgt
     1261 atcctgcagg gcctccctga tcgcctgctc cgcgtgccgc tggaccaacc gtccgatcgg
     1321 cgacttggcc actcctgtca tacctcatat gatgccaggt cagcggcgca cgtgaaggat
     1381 ttgacgcctc cgagctgaag gaatagacgc actgcagctg attgagtaga cgatatcgcg
     1441 ctgacggatc agtcgcagcc ctgctgcagc agtgagccac ggggcc
//
LOCUS       DASRPQ010001551         1087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1453401, whole genome shotgun sequence.
ACCESSION   DASRPQ010001551 DASRPQ010000000
VERSION     DASRPQ010001551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1453401"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..569
                     /locus_tag="VFD73_17675"
     CDS             <1..569
                     /locus_tag="VFD73_17675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75813.1"
                     /translation="RTLTLEAPQGWSDWNSAQTVIAQELNAVGIKVQVTQPSFNQRTA
                     DITNGTYDLALDNNAGLDSTPVSYFQRVYQLPIQKQQSAQQNWERFSSPSDWALVQQA
                     ATTPPTDTAKLNQIFSTLEKDFLQQQPEIPLWYNGVWFQGNTQYWSNFPSSTGNDQNI
                     PAMWNGYIGAMTTVPALAQLTPTPQKAS"
     gene            689..>1087
                     /locus_tag="VFD73_17680"
     CDS             689..>1087
                     /locus_tag="VFD73_17680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI75814.1"
                     /translation="MRRYLTRKIITYVVAFFIGVTVDWALPHFMPGDPIQGMLSKYNV
                     ADNAGYQALYAQFQSSYGLNVSLWQQYLNFWHGVLSGDFGQSIFAQGATVSSLIFSAM
                     PYTIALLVPAVLLSYSLGNRLGAAAARRKYL"
BASE COUNT          200 a          376 c          327 g          184 t
ORIGIN      
        1 gccggacgct gacgctggag gcgccgcagg gctggtccga ctggaacagc gcgcagacgg
       61 tgatcgcgca ggagctgaac gcggtcggca tcaaggtcca ggtgacccag ccgtccttca
      121 accagcgcac cgccgacatc accaacggca cctacgacct ggcactggac aacaacgctg
      181 gcctggactc cactccggtg tcttacttcc agcgtgtcta ccagctcccg atccagaagc
      241 agcagtccgc tcagcagaac tgggagcggt tcagctcgcc gtcggactgg gccctggtgc
      301 agcaggcggc gaccaccccg ccgactgaca ccgccaagct gaaccagatc ttctccacgc
      361 tggagaagga cttcctgcag cagcagccgg agattccgct ctggtacaac ggcgtctggt
      421 tccagggcaa cacccagtac tggtcgaact tcccgtccag cacgggtaac gaccagaaca
      481 tcccggccat gtggaacggc tacatcggcg ccatgaccac ggttcccgcc ctggcgcagc
      541 tgactccgac cccgcagaag gccagctgac ccggccttgc cggttcatct gattaaccgc
      601 tagcggtcct caggcgaccc gttccccggc caactggccg gggaacgggt cgcagagggc
      661 tgtttgaccc acatccggga gcctgccagt gcggcgctat ctcacaagga aaatcattac
      721 gtacgtggtg gcgttcttta tcggcgtcac cgttgactgg gcgctcccgc acttcatgcc
      781 gggcgacccg atccagggaa tgctgtccaa gtacaacgtg gccgataacg cggggtacca
      841 ggcgctctac gcgcaattcc agtcctccta cgggctcaac gtgtcgctgt ggcagcagta
      901 cctgaacttc tggcacggcg tgctgagcgg cgacttcggg cagagcatct tcgcgcaggg
      961 agctacggtc agctcgctca tcttctcggc gatgccgtac acgatcgccc tgctcgtccc
     1021 ggccgtactg ctgtcttact ccctggggaa ccggctgggc gccgcggcgg cgcgccggaa
     1081 gtacctc
//
LOCUS       DASRPQ010001552         2722 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3944195, whole genome shotgun sequence.
ACCESSION   DASRPQ010001552 DASRPQ010000000
VERSION     DASRPQ010001552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2722
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3944195"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1692
                     /locus_tag="VFD73_17685"
     CDS             <1..1692
                     /locus_tag="VFD73_17685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZI75815.1"
                     /translation="TTLDEYRKHIEKDAALERRFQPVVVGAPSVADTVAILRGLKERY
                     EVHHGVRITDDALVAAAQLSDRYIGDRFLPDKAIDLVDEAASRLRIEIDSLPQEIDEV
                     ERRIVQLEIEKAALAKERDKTSRERLAKVEQDLAGLRERSSGMKAQWQAEKEAITGLQ
                     AKKAELEQLRMEADQATRRGDLQKAAEISYGRIPALDKEIAAKEKRLHEIQKQAKYLK
                     EEVDAEDIAEIVAKWTGIPVTKMLESERERLTRLEEELGHRVIGQRPALAAVSNAVRR
                     SRAGLQDQNRPLGSFIFLGPTGVGKTETARALAEFLFDDERALVRLDMSEYMEKHSVA
                     RMIGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVLLQILDDGRLTDS
                     QGRVVDFRNSVIIMTSNIGSQYIVDAGAQLDPAGWERVEQRVRDELRNHFRPEFLNRV
                     DDIIVFRQLSREDLVHIVDLQLARLAEMLGHRHIALEVTPEAKALIATEGYDPVYGAR
                     PLKRVIQRRLQNPIALQLLEGNFHDGDTVRVTRRGQELQFERAEGGVREPEMVSA"
     gene            1685..2161
                     /gene="tadA"
                     /locus_tag="VFD73_17690"
     CDS             1685..2161
                     /gene="tadA"
                     /locus_tag="VFD73_17690"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: protein motif:HMM:NF008113.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HZI75816.1"
                     /translation="MRRGTPSPSDLAGMEAALRLARAASVREEIPVGAVVIGDGETLG
                     EAHNETVQRHDPTAHAELLALQRALHRVGEDRLLLATLYITLEPCAQCAGAIVLGKVG
                     RVVFGAYDSRCGMAGSVYDLLRNPRTNHRPEVVGGLMAEECGDLLKRFFLVKRGGL"
     gene            2268..>2722
                     /locus_tag="VFD73_17695"
     CDS             2268..>2722
                     /locus_tag="VFD73_17695"
                     /inference="COORDINATES: protein motif:HMM:NF025092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HZI75817.1"
                     /translation="MRLPGSSSSRQIPGFLLLFLLILTSVAAAPITHPPKTGLVVGHV
                     RDPHGDPIASAQVFIVGTALSALADSAGTYRFAAVPEGRAEIRAAFIGYKSSQATVTV
                     RAGHTTTHDFVLEPTPSQLEELTVTTGAETDAVGQAAAPAPGGVPRGKI"
BASE COUNT          506 a          846 c          923 g          447 t
ORIGIN      
        1 acgacgctgg acgagtatcg caagcacatc gagaaggacg ccgcgctcga gcgtcgcttc
       61 cagcccgtcg tggtgggtgc accgagtgtc gcggacaccg tcgccattct gcgcggcctc
      121 aaggagcgtt acgaggtaca ccacggcgtc cggattaccg acgatgcgct ggtcgccgcg
      181 gcgcagctct ccgaccgtta catcggcgac cgcttcctgc ccgacaaggc catcgacctg
      241 gtggacgaag ccgccagccg gctgcgcatc gagatcgatt cgctccccca ggagatcgat
      301 gaggtggagc ggcgcatcgt acagctggag atcgagaagg ccgccctcgc caaggagaga
      361 gacaagacat cgcgcgagcg cctcgccaag gtggaacagg acctcgccgg gctgcgtgag
      421 cgctccagcg ggatgaaggc gcagtggcag gcggaaaaag aagcgatcac cggcctgcag
      481 gcgaagaagg cggagctcga gcagctgcgc atggaagccg accaggcgac gcgccgtggc
      541 gacttgcaga aggccgccga gatcagctac ggccgcattc ctgccctcga taaggagatc
      601 gccgcgaagg agaagcgcct gcacgagatc cagaagcagg cgaagtacct gaaggaagaa
      661 gtcgacgccg aggacatcgc cgagatcgtg gcgaagtgga ccggtatccc ggtgacgaaa
      721 atgcttgaat cggagcggga gcggctcacc cggctggaag aggagctggg gcaccgagtc
      781 atcggccagc ggccggcgct tgccgcggta tccaacgcag ttcgccgaag ccgtgccggt
      841 ctgcaggatc agaatcggcc gctcggctcg ttcatcttcc tcgggcccac cggggtgggt
      901 aagacagaga cggcccgggc cctggccgaa tttctgtttg atgatgagcg cgcgctggtg
      961 cggctcgaca tgtcggagta catggagaag cactcggtgg cccggatgat cggagcgcct
     1021 ccgggatatg tgggatacga ggaaggtggc cagctcaccg aagctatccg gcggcggccg
     1081 tacagcgtca tcctgttcga cgagatcgag aaggcgcacc cggacgtctt caatgtgctg
     1141 ctgcagatcc tggacgacgg ccggctcacc gatagccagg gacgggtggt cgacttccgc
     1201 aattcggtga tcatcatgac ctcgaacatc ggcagccagt acatcgtgga tgccggtgcg
     1261 cagctcgacc cggcgggctg ggagcgagtg gagcagcggg tccgcgacga gctccgtaac
     1321 cacttccgtc ccgagttcct caatcgggtg gacgatatca tcgtcttccg gcagctcagc
     1381 cgagaggacc tggttcatat cgtcgacttg cagctggcgc gcctggcgga gatgctgggt
     1441 caccggcata tcgcgctcga ggtgacgccg gaggccaagg cgcttattgc aacggagggc
     1501 tacgatccgg tgtacggggc gcgcccattg aagcgggtca ttcagcggcg gctgcagaat
     1561 cccatcgcgc tgcagctcct ggaaggaaac ttccatgacg gcgacaccgt gcgggtcacc
     1621 cgcaggggcc aggagctcca gttcgagcgc gcggaaggcg gtgtcagaga gcccgagatg
     1681 gtcagtgcgt aggggcacgc cgtcacccag cgatctggca ggaatggagg cggctctccg
     1741 tttggcccgg gccgcctccg tccgtgagga gatcccggta ggtgcggtgg tcatcggcga
     1801 tggagagacg ctgggcgaag cgcacaacga aacggtgcag cgccacgatc cgaccgccca
     1861 tgcggagttg ctggcgctgc agcgggcgct ccatcgggta ggagaagacc gtctcctcct
     1921 tgccactctg tacatcactc tggaaccctg cgcccagtgc gccggcgcaa tcgtgctggg
     1981 caaagtgggc cgtgttgtct tcggtgccta cgattcccgc tgcggcatgg cgggctccgt
     2041 gtacgacctg cttcggaacc cgcggacgaa tcaccggccg gaggtggtcg gcggcctcat
     2101 ggccgaagaa tgtggggatc tgctcaaacg tttctttctg gtaaagcgag gaggtttata
     2161 ggcgggttca gcacctgctg tgcgagtctc ttctgctgct gcatctccag agaacatcgc
     2221 cgccagcctc ggcggtccag cgcaatcccc tgcactcgga gcgtcccatg cgtctccccg
     2281 gttcctcttc cagccggcag attccaggct ttcttctcct gtttctgctg atcctcacca
     2341 gcgtcgccgc ggcaccgatc acccacccac ccaagaccgg gctcgtcgtc ggccacgtgc
     2401 gggatccaca tggcgatccg attgcaagtg cgcaggtgtt cattgtcggg accgccctca
     2461 gcgcgttagc cgactccgcg ggaacctatc gatttgctgc ggttcccgaa gggcgggcgg
     2521 agatcagggc cgccttcata ggctataagt cctcccaggc gacggtcacg gtcagggcag
     2581 ggcatacgac gacccacgat tttgtcctcg agccaacgcc ctcacagctc gaggagctga
     2641 ccgtcaccac aggagctgag acggatgctg tgggccaggc ggcggcgccg gcacccggcg
     2701 gggttcctcg cggcaagatc ga
//
LOCUS       DASRPQ010001553         2133 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1453690, whole genome shotgun sequence.
ACCESSION   DASRPQ010001553 DASRPQ010000000
VERSION     DASRPQ010001553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2133
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1453690"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..509)
                     /locus_tag="VFD73_17700"
     CDS             complement(<1..509)
                     /locus_tag="VFD73_17700"
                     /inference="COORDINATES: protein motif:HMM:NF014149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75818.1"
                     /translation="MAMTVALGRTVSAAPVAGPAAGPGTRATVNIDGADPGPAFQGIG
                     AISGGGGNSRLLIDYPPGERAQILDYLFSPHFGAALQMLKLEIGGGGFSSDGSEPSVE
                     PARGQLDCGAGYEFWLARQALARNPAIKLYGLQWSAPAWVRDPHGGLWSRADVGYVVD
                     WLRCARRNGL"
     gene            complement(659..1789)
                     /locus_tag="VFD73_17705"
     CDS             complement(659..1789)
                     /locus_tag="VFD73_17705"
                     /inference="COORDINATES: protein motif:HMM:NF014237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase"
                     /protein_id="HZI75819.1"
                     /translation="MLPILIVVVALAAIAGVAAGVKISSSDPPPKSKPVAVAVNPEIE
                     ALLKKGTRDDTADDYFERTSPYFAGAAAGDYNSKFRNLGELLVKDGLSHTIIGLGREM
                     NGSWYEWSERRAPSSDPDAFIRAWRQIVTTMRSVPGQHFKFLWTVYPTGTSVADAWPG
                     NAYVDYIGTDIFDWYGGSKGTYLHTASGALDHEGKWQQILTTEPGGLNWMAAFSHATG
                     KPIIIPEWGLDFHTFGGKDNPLFITNMLAWMKAHHAIGLYWAGGQVSRAPTASGPLLV
                     NQGASSQNNSPGTVNGMGQLMGGRLQFAGVYLPDHEWPSEEADQPVLAPWQHAGYQLI
                     LSVPIFPNPPAIKSYSGPPEPGNKSYQLADYPDVVAALRQGA"
BASE COUNT          371 a          687 c          683 g          392 t
ORIGIN      
        1 aggccgtttc gccgggcgca ccggagccag tcgacgacat agcccacgtc cgcgcggctc
       61 cacaggcccc cgtgagggtc gcggacccag gccggagccg accactgcag gccgtacagc
      121 ttgatcgcgg gattgcgcgc cagggcctgg cgggctagcc agaattcata gccggccccg
      181 cagtccagct ggccccgggc gggctcgaca gagggttccg aaccgtccga ggagaaaccg
      241 ccgccgccga tctccagctt cagcatctgc agcgcggccc cgaagtgcgg tgagaacaaa
      301 tagtcgagga tctgcgcgcg ctcacctggc gggtagtcga tgagcagtct ggagttgccg
      361 ccgccgccgc taatcgcgcc gatcccctga aaggcgggcc cgggatcagc accgtcgatg
      421 ttgaccgtgg cccgggtgcc tggcccagcg gctggcccgg cgacgggcgc ggcagaaacc
      481 gtcctgccca gcgcgaccgt catcgccatg atggccacgg ctctcgccat ccggcgccac
      541 gtcacatagt gagctaacgg ggaccatacg cggaaagttg cacccggccc gttcggcctc
      601 atcgtcctta gcggcgctga cgatgcgggc caccgctgcc gggccgctgc gccacgagtt
      661 acgcgccttg cctgagtgcc gctaccacat ctgggtagtc ggctagctga taggacttat
      721 ttcccggctc aggcgggccg gaataggatt tgatcgcggg aggattcggg aagataggca
      781 cgctcaggat cagctggtaa cccgcatgct gccagggggc aagcacgggc tgatccgcct
      841 cttccgacgg ccattcgtgg tcaggcaggt atacgccggc gaactgcaag cggccgccca
      901 tcagctgccc catgccgttg acagtgccag ggctgttgtt ctgcgacgac gcgccctggt
      961 tgaccagcag cggaccgcta gccgtcgggg cccggctgac ctgccctccg gcccagtaga
     1021 gcccgatagc gtgatgggcc ttcatccacg ccagcatgtt cgtgatgaac aacgggttat
     1081 ctttaccgcc gaacgtatgg aaatcgagtc cccactccgg gatgatgatc ggcttacccg
     1141 tggcgtgtga aaatgcagcc atccaattca ggccgccagg ctcggtggta aggatttgct
     1201 gccactttcc ctcgtgatcg agcgcgccag atgccgtgtg caggtacgtg cccttactgc
     1261 cgccgtacca gtcgaagata tccgttccga tgtagtcaac gtaggcattt ccaggccagg
     1321 cgtcggctac cgaagtaccg gttgggtaca cagtccacag gaacttgaaa tgctgaccgg
     1381 gcaccgagcg catagtggtg acaatctgcc gccatgcccg gatgaaagca tccgggtcgg
     1441 acgatggcgc gcgacgctcg ctccattcgt accatgagcc gttcatctca cggccgaggc
     1501 cgataatggt gtggctgagt ccgtccttca ccagcaattc accaaggtta cggaacttcg
     1561 agttgtagtc gcccgccgcg gccccggcga aatacgggct ggttctctcg aagtagtcat
     1621 ccgcggtgtc gtcgcgggtg cctttcttca gaagagcctc aatttcgggg tttactgcga
     1681 cggctacagg cttggatttc ggcggaggat cactggatga tatcttgacg cctgccgcga
     1741 cacctgctat ggcagccaag gccaccacta cgatcaggat aggaagcatc ttccgcggga
     1801 tcttcctgac cgtgggcata cccttcctta ctggcaccgt gaagctgtgg ctctccggct
     1861 tggctaccta cgatcgatcg tacgttagcc ccggtcttgc cctgtgacgt ggcgaccggg
     1921 gcgcaggcag cgcccaaggt cgaccgcgtt tcagccggtt tgccgacctt gtccggcact
     1981 ggggctttgc tggctcctgc tccggccggc cgatacgatc cgggttggga gggatgatgc
     2041 ccagtaggcg gcgccggctc gaccctgtgg gcccgttcgg caatccggac gggtcacgag
     2101 ccgacctcga ggatgtgatc agcgagttcg tcg
//
LOCUS       DASRPQ010001554         2454 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_805562, whole genome shotgun sequence.
ACCESSION   DASRPQ010001554 DASRPQ010000000
VERSION     DASRPQ010001554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2454
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_805562"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            57..1082
                     /locus_tag="VFD73_17710"
     CDS             57..1082
                     /locus_tag="VFD73_17710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HZI75820.1"
                     /translation="MSATPRQSPVDLRADDTEPTIAPVAEESRIFTEVGEEISKVIVG
                     QRAMLDRLLVALLADGHVLLEGVPGLAKTLAVRTLAATIRGGFHRIQFTPDLLPSDLV
                     GTMIYNQRSGDFTVQKGPIFTNILLADEINRAPAKVQSALLEAMQEKQVTIGGQTFPL
                     PELFLVLATQNPIEHEGTYPLPEAQVDRFMFKLVVTYPERSEEREVLDRMTAGPEPVP
                     RSVLDPERVLEARTTVREVYVDGRVKEYVLDVIGATRSPQAVGLGELTPLIEYGASPR
                     AAIFLVRAAKAHAFLQGRGFVTPEDIKSLGYDVLRHRILLSYRADAEGVTADELLRRI
                     FERVPVP"
     gene            1079..>2454
                     /locus_tag="VFD73_17715"
     CDS             1079..>2454
                     /locus_tag="VFD73_17715"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HZI75821.1"
                     /translation="MTPEEVMREVRRIEITTRHLVRDIVAGEYSSAFRGRGVEFSEVR
                     EYQPGDDVRSIDWNVTARLGTTYVKRYLEERELTVLFVIDVSASGRFGTHLRTKRSLS
                     VEVSAVLALAAARNHDRIGAVWVSDRVERFVPPRRGRRHTLRIINDLLALEPAGTGTD
                     LSAGLQFAESVLRRRSVIFVVSDFLATGYLSALDSLCRRHDVVALQLYDERERELPNV
                     GLVSLADPETGRWRLVDTANSDTRRRFHQAAEQFDRSLQQSVLERGGDLVRLETGCSY
                     AEPLIAFFRRRELGKRFRAAGSRRSFRTVASLALLGFLGLAPWRQAEAQISGQSFEVM
                     IPSKPATVGDSVTLEFRVRLDDRDLLFDTIPAPIGDMPEGVRVLSVDKLQRTPDRIFH
                     GHARLAFYRPGRQPVPVFGLPFMRAVKGVQRATLPSDSAFVEIRPLLAAGNPSLKDIR
                     EIEHTARPP"
BASE COUNT          416 a          814 c          789 g          435 t
ORIGIN      
        1 cctgctgtcg ccaccccggt tgaattggcc gagccggtga atcagccggt ctcctcgtga
       61 gcgccacgcc gaggcagtcg ccggtggacc tgcgggcaga cgataccgaa ccgacgatag
      121 cgccggttgc ggaagaaagc cgcatcttca ctgaggtcgg ggaggaaatc agcaaggtca
      181 tcgtgggcca gcgcgcgatg ctcgaccgcc tgctggttgc gctcctggcc gatggccatg
      241 tgctgctcga gggtgtgccg ggactggcca agaccctcgc ggtccgaacg cttgcggcca
      301 ccatcagggg aggattccac cgcattcaat tcactcccga cctgcttccg tccgacctgg
      361 ttggcaccat gatctacaac cagcggagcg gcgacttcac ggtccagaag ggccccatct
      421 tcaccaacat tttgttggct gacgaaatca accgggctcc ggccaaggtc cagagcgcgc
      481 tgctcgaggc catgcaggaa aagcaggtga cgatcggcgg gcagaccttt ccgctccccg
      541 agttgttcct ggtcctggcc acccagaatc cgatcgagca tgagggcacc tacccgctgc
      601 ccgaggcaca ggtggatcgc ttcatgttca agctggtggt cacctatccg gaacggagcg
      661 aagaacggga ggtgctcgac cggatgacgg ccggaccgga gccggtcccg cgaagcgtgc
      721 tggaccctga gcgagtgctc gaagcccgca ccaccgtgcg tgaggtctat gtcgacgggc
      781 gggtcaagga gtacgtgctc gatgtcatcg gtgccacccg ctcgcctcaa gcggtggggc
      841 tgggcgagct gactcctctg atcgagtacg gcgcttcgcc ccgggcggcc atcttcctgg
      901 tccgggcggc caaggcgcac gctttcctcc aggggcgagg cttcgtcacc ccggaggaca
      961 tcaagagctt gggctacgac gtgctccgcc accgcattct cctgagctac cgcgccgatg
     1021 ccgaaggggt cactgccgac gagctgctcc ggcgcatctt cgaacgagtt cccgtgccat
     1081 gacgccggag gaggtcatgc gcgaggtgcg ccggatcgag atcaccactc ggcacctcgt
     1141 ccgtgacatc gtcgcagggg aatactccag cgcgttccgt ggccgcggtg tcgaattctc
     1201 cgaagtccgc gagtaccaac ctggtgatga cgtccggagc atcgactgga atgtcaccgc
     1261 ccgattggga accacctacg tcaagcgcta cctcgaggag cgcgagctca ccgtcctctt
     1321 cgtcatcgac gtcagcgcat cgggacggtt cggcacccat cttcggacca agcggtcact
     1381 ttccgtggag gtcagcgccg tgctggcgct cgccgccgcc cggaatcacg accggatcgg
     1441 agccgtgtgg gtgagcgacc gcgtggaacg cttcgtgcca ccgcgtcggg gaaggcgcca
     1501 caccctccga atcatcaatg acctgctcgc cctcgagcct gcgggaaccg gcaccgacct
     1561 ctcggcgggg ctgcagtttg ccgagtcggt gctccgccgc agatcggtca tcttcgtcgt
     1621 ctccgacttt ctggccaccg gctatctcag cgcgctcgat tcgctctgcc ggcgacacga
     1681 cgtggtggca ctccagctct acgatgaacg ggagcgggag ctgcccaacg tcgggctggt
     1741 ctcgttggcg gatccggaga ctggacgctg gcggctggta gacacggcaa actccgacac
     1801 tcgccgccgg ttccaccagg ctgccgaaca gttcgaccgc tcgctgcagc agtccgttct
     1861 ggagcggggc ggagatctgg tgcggctgga gacgggctgc tcctacgccg agccgctcat
     1921 tgcctttttc cgaaggcggg agctcggcaa gcggttcaga gcggcaggaa gcagaagaag
     1981 ctttcgaacc gttgcctcgc tggcgctgct cggatttctg ggtctggctc catggcggca
     2041 ggccgaagcc cagatttcag gccagtcgtt cgaggtcatg attcccagca aaccggcgac
     2101 ggttggcgat tcggtaaccc tcgagttccg ggtccgcctg gacgaccgcg acctgctctt
     2161 cgacactatt ccagcaccga tcggcgacat gcccgaaggc gtccgcgtgc tctcggtgga
     2221 caagctgcag cgcacgccgg accggatctt tcatggccac gcacggctcg cgttctatcg
     2281 accggggcgt cagccggtgc ctgtgttcgg gctgccattc atgcgcgcgg tcaagggcgt
     2341 acagcgagcc acccttccca gcgactcggc gtttgtcgag atccggccac tccttgccgc
     2401 cggcaatcca tccttgaagg acatccgtga gatcgagcat acggcgcgac cgcc
//
LOCUS       DASRPQ010001555         1122 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_805647, whole genome shotgun sequence.
ACCESSION   DASRPQ010001555 DASRPQ010000000
VERSION     DASRPQ010001555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_805647"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(485..973)
                     /locus_tag="VFD73_17720"
     CDS             complement(485..973)
                     /locus_tag="VFD73_17720"
                     /inference="COORDINATES: protein motif:HMM:NF015999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaK/EbsC family protein"
                     /protein_id="HZI75822.1"
                     /translation="MTQVTEHLQARGVPFEPIAHQQAYTSVAEARALGISASEVLKTV
                     AMRVAGGYALMAVPATCHLDMHLVQAAAGDRHVRLATEQELLRDFPGIELGAMPPLGS
                     LLGAPLYVDQEVLQHETVVFAAGSQTESVQVRTADLLQHEQVTTVPLIKHADENDKDW
                     LR"
BASE COUNT          191 a          366 c          375 g          190 t
ORIGIN      
        1 ctttcgaacc acatcacggc aaggcccgac gggccgacac atcgatctaa agccaggcca
       61 cagcggccgg caggcggttc gggagccagc ccatcggacc cctcaacgct acgacgtgcg
      121 ccgcagcgca tccggaaaca attaggcggg tcggtgcgct gttatcaagg actcttggca
      181 tcctgggctg catggcagtc ccggttgggg tccggagggg ccagcggact gtatgccatg
      241 catcgccacg cttggggtga atgtccgctt ctgccgcatt ccggttggtc agtcatccgc
      301 ctggccgtgt gctggcccgg tctttaggac gatgagctcg gtgcgggccg ggtcagcgag
      361 ccatccttgg gggaactggg cctggcagtc gccgacctcg gcgggcagcc ggacggcgtg
      421 cacggtgcca gcgaggccaa tgagccctta cgggggtgga gccgcggtag gcataggccc
      481 gtggctaccg cagccagtcc ttgtcattct cgtcagcatg cttgatcaac ggcacggtcg
      541 tcacctgctc gtgctggagt agatccgccg tcctgacctg aacggattcg gtctggctgc
      601 ctgcggcaaa gaccacagtt tcgtgctgga gcacctcctg atcgacgtag agcggtgcgc
      661 ccagcagcga gccaagcggc ggcatggcgc ccagctcgat gcctggaaag tcccgtagca
      721 gctcctgttc ggtggcaagc ctgacatgac gatcgcccgc cgctgcctgg acgaggtgca
      781 tgtcgaggtg acaggttgcc gggaccgcca tcagggcata gccgcccgcg acgcgcatcg
      841 cgaccgtctt caggacctcg ctggcactga tgccgagcgc cctcgcctcg gcgaccgagg
      901 tgtaggcctg ctggtgcgcg atgggctcga acgggacgcc gcgggcctgg agatgctccg
      961 ttacctgcgt catcacccac cccccttgtc tccccaggta acgagcataa cgcggatact
     1021 ccgtcgcgac ccatggcagt taccgcgctc cagcatgtag ccgggcccgg accggcgcca
     1081 accgggagaa caggcatgag cggaagctga caacttgaga tg
//
LOCUS       DASRPQ010001556         1439 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4576094, whole genome shotgun sequence.
ACCESSION   DASRPQ010001556 DASRPQ010000000
VERSION     DASRPQ010001556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1439)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1439)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1439
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4576094"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..577)
                     /locus_tag="VFD73_17725"
     CDS             complement(<1..577)
                     /locus_tag="VFD73_17725"
                     /inference="COORDINATES: protein motif:HMM:NF040248.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI75823.1"
                     /translation="MAAYLLRRTAVSVVVLIGISMIVFLLLHLVYPSPGLDVLGIGAR
                     PVQVAAWNRDHGFTQPVAVQYWHYVDRLLHGDLGYSYKLNQSIASLFEERWARSLYLS
                     GTSLALALLATVSLGSYQAVRRRRLGDRVATGLEYTLYAMPDYVLYLLAIQVLAFAWP
                     VLPYQASQATSLLAVMADWRSMVLPITCSAIL"
     gene            complement(1040..>1439)
                     /locus_tag="VFD73_17730"
     CDS             complement(1040..>1439)
                     /locus_tag="VFD73_17730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75824.1"
                     /translation="LPVGVSVLCPGWVRTSIAQADRNWSQSLGEVPPRAATAEVTEPH
                     VQHAIDEGMAPAAVADLVADAITANRFWVFTDPHFTQMALDRWQRIAEGSNPQTDMDM
                     PGLPPAKQLIAEIQRLLAGPGGALWLPTGP"
BASE COUNT          261 a          462 c          488 g          228 t
ORIGIN      
        1 tgagtatcgc ggagcaggtg atgggcagca ccatgctgcg ccagtcggcc atcaccgcca
       61 gcagcgaggt cgcctggctc gcctgatagg gcaagaccgg ccaggcgaac gccaggacct
      121 ggatggcgag caggtacagc acgtagtccg gcatggcata cagggtgtat tccaggccgg
      181 tagcgacgcg gtcgccgaga cggcggcggc ggaccgcctg gtagcttccc agcgagacgg
      241 tggcaaggag cgcaagcgcc agcgaggtcc cggacaggta caggctgcgt gcccaccgtt
      301 cctcgaacaa gctggcgatg ctctgattaa gcttataaga gtagccaaga tcaccgtgca
      361 gcagccggtc cacgtagtgc cagtactgca cggccaccgg ctgagtgaac ccgtgatcgc
      421 ggttccaggc cgccacctgc accggacgcg ccccgattcc cagcacatca aggccgggcg
      481 acggatagac caggtgcagc agcaagaaga cgatcatcga gatgccgatc aagacgacaa
      541 ccgataccgc cgtccgcctc agcaggtagg cagccacgcc gggcctccct tcccagcgga
      601 gccctggcca tcgcgcagca ctgactacgt taacccaggc gcgccgctgg ctgaccggct
      661 gttcctggac gggatacggg tcagcgagca gctgctcgta tcacgtgatt tcgacgtcgg
      721 cgacctgatc gctgtcatcc tgagaacggg ccttgctctc cgggagactc ccggagagct
      781 tgaagatcgg ctgtgcaatc gtgtccagta gcggcggcga ttcccttaac cggacgggag
      841 gccagccgcc tgaggtcacc ggttcgcgag ctggtgtctc agagttatct gctctgtagg
      901 gcagtacccg caaagcgcag atgagcatac ccaagccagt ttgcccgaac acggcgaccg
      961 ccactcccgg gctcgccggg gcccagacgg cgtagaagca gtgcgccgga tcgctccagg
     1021 tggtgccgtc agccggtggt caggggcccg taggcagcca taacgcgccg cccgggccag
     1081 ctagcagtcg ctggatctcc gcgatgagct gcttggcggg tggcaggcca ggcatgtcca
     1141 tgtcggtctg gggattgctg ccttcggcga tgcgctgcca tcggtcgagt gccatctggg
     1201 tgaagtgagg gtcggtgaat acccagaacc ggttggcggt gatggcatcc gcgaccaggt
     1261 cggccacagc ggcaggcgcc attccttcgt cgatcgcgtg ctgcacgtgc ggttctgtca
     1321 cctcggcggt cgccgcccgc ggggggacct ctcccaggct ctgtgaccag ttgcggtcgg
     1381 cttgggcgat gctggtgcga acccagcccg ggcacaagac gctgaccccg acgggcagc
//
LOCUS       DASRPQ010001557         1121 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4576251, whole genome shotgun sequence.
ACCESSION   DASRPQ010001557 DASRPQ010000000
VERSION     DASRPQ010001557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4576251"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(15..1004)
                     /locus_tag="VFD73_17735"
     CDS             complement(15..1004)
                     /locus_tag="VFD73_17735"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI75825.1"
                     /translation="MTSQQPAISIVLATDSYETIQPVVQCLLRQTVKARLELIILTPD
                     QESLGLDESDVRGLATIRVLEAGPLHGFARARAVGIRAASAPIIVIGESHSYPDAGWA
                     EALIEAHQHPWAVVVPGFGNANPDGALSWAAFLRDYGCWLAGLPGGEIFMMPTHNSSY
                     KREVLLELGSDLEGALTHGDQLNRQLRARGHRIYFEPTARIEHLNISRPAAWFYERFL
                     CGLMVGGQRARRWPWYKRLFYVAGSPVIPLVVFARSWNGLRRAQRQLGLPIGTIPALV
                     VGAIVSTLGEVAGYARGAGRTAQQHMNEYELHKVRYAPRPQPYASRSVLSQKA"
BASE COUNT          232 a          331 c          337 g          221 t
ORIGIN      
        1 cagatcagta gcggtcatgc cttttgactg agaaccgatc gggaggcgta tggttggggc
       61 cgaggagcat accgaacttt atgcaactcg tattcgttca tgtgctgctg ggcggttcgg
      121 ccggcgccac gagcataccc cgccacctcg cccagtgtcg agacgatggc tccaactaca
      181 agagctggaa tcgtgccgat cgggagtcca agctgccgct gtgcccgccg caaaccattc
      241 cagctgcggg cgaaaacgac gagcgggatc accggcgatc cggcaacgta gaaaagtcgt
      301 ttataccagg gccagcgacg ggcccgctgt cctccaacca tcaagccgca gaggaaccgc
      361 tcataaaacc aagctgccgg ccgcgagatg ttcaggtgtt cgatcctggc cgttggctcg
      421 aagtagattc tgtgccctcg tgctcggagc tgtcgattga gctggtcgcc gtgagtaagg
      481 gctccctcga gatcggaccc aagctccagt aaaacttcac gcttatagct ggagttgtgg
      541 gtgggcatca tgaagatctc cccgccgggg aggcccgcca gccagcagcc atagtctcgg
      601 agaaaagccg cccagctgag tgccccgtca ggatttgcgt taccgaagcc aggtacgaca
      661 acagcccagg gatgctgatg tgcttcaatc agtgcctcgg cccaccctgc atcgggataa
      721 ctgtgcgact ccccgatcac tatgatggga gcgctcgccg cacggatgcc gacagctcgc
      781 gctcgggcga atccgtggag ggggcctgcc tccagcactc ggatcgttgc aagcccgcgt
      841 acgtccgact cgtctagtcc aagcgattcc tggtcgggag tcaaaatgat cagctcgagt
      901 cgagctttca ccgtttgtcg aaggagacac tggaccactg gttggatggt ctcgtagctg
      961 tcggtggcaa gaacgatgga gatggcaggc tgttgagaag tcacttccgg gttgtctcct
     1021 tatcggatgc agttcttcgg gtcaggcctc tcaagaggcg catgcccaat ttttcggccg
     1081 gatacagcac actcctcaga ccagaggact cgtaaatccc g
//
LOCUS       DASRPQ010001558         1143 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1774530, whole genome shotgun sequence.
ACCESSION   DASRPQ010001558 DASRPQ010000000
VERSION     DASRPQ010001558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1774530"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..663
                     /locus_tag="VFD73_17740"
     CDS             <1..663
                     /locus_tag="VFD73_17740"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HZI75826.1"
                     /translation="LQERTFADALALRLEREPDMEVVAALDTSALPSRMLVGSRVDVV
                     LLDADLADNAAFRLGQELSQASEAPSLIFLSDSNDPERIVRAVGVGAAGWVRKDESLD
                     WLIYVIRGVARGETWLPPDQIGEVLRLLMRGPDHDEDGDRLLAALTGREREVLLCLAE
                     GNRRSDVAEHLHMSPNTVRTHLQNLMGKLGVHTALEAVALTRQVLDEYSPDGVWRPER
                     GT"
BASE COUNT          205 a          354 c          368 g          216 t
ORIGIN      
        1 ctccaggagc gaaccttcgc tgatgccctg gcgctgcgac tcgagagaga gccggatatg
       61 gaggtggtgg cggcgctgga cacgagcgcg ttgccgtccc gcatgctcgt gggcagccgc
      121 gtggacgtgg tactgctcga tgctgatctt gccgacaacg ccgcgttccg cctgggccag
      181 gaactgtccc aggcctccga ggcaccgagc ttgatctttc tcagtgactc caacgaccca
      241 gaacgcatcg tgcgcgcggt cggggtgggt gccgccggct gggtgcgcaa ggatgagtcg
      301 cttgactggc tgatctatgt catcaggggc gtcgctcgag gcgagacctg gctgcctccg
      361 gatcagatcg gggaggtgtt gcgacttctg atgcgtgggc ctgatcacga cgaagatggc
      421 gaccgattgc tggcggcact aacgggtcgt gagcgggagg ttctgctgtg ccttgccgaa
      481 ggcaaccggc gatctgatgt ggccgagcac ctgcacatgt cgcctaacac cgtccggaca
      541 cacctgcaga accttatggg aaaactgggc gtgcacaccg cactggaggc cgtggcactg
      601 acccgtcagg tgcttgacga gtactctccc gacggtgtct ggcgtcctga acgaggcact
      661 tgataggccc ggatgaacgc tcggtggcac cgtccactgt ctcaccatgc cgatcccggc
      721 cgatcccgga cgccatccct cagtggctag atgacgttcc gggaagcatc acccccaccg
      781 tgaccaagac ggctacgtca ggcgagggct gcgaaggccg ttgcctcctg gtcagtctta
      841 gggcatgcct ggacacctca ccgttctgga actgacggat cctcgctggg gagagttcgt
      901 gacgaggcag ccgtcggcaa caccgtttca tcacccggac tggggcaagc tagttgctac
      961 ttgctattga ggccgggcat gcgaatcccc cacccgctaa acacgtgacc gcggaggaga
     1021 gtgacgcctg tcgtgcaccg catgctacaa cgtgacgctc ggcccggctc gcatgtgatg
     1081 aaccaaatca ggcacagcca taagcgcgcc tggcttattg tcatcgtcct attgcttgct
     1141 gcc
//
LOCUS       DASRPQ010001559         1116 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4576293, whole genome shotgun sequence.
ACCESSION   DASRPQ010001559 DASRPQ010000000
VERSION     DASRPQ010001559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4576293"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(191..472)
                     /locus_tag="VFD73_17745"
     CDS             complement(191..472)
                     /locus_tag="VFD73_17745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75827.1"
                     /translation="MPTRLDRAEAPFYPDDLLPQLQRTLALLADLELQHEIQRDQLES
                     WSGPRHVKDRLLADLEQCHRANRERLEVCLQGLRLQGGLAPAMPRRTEH"
     gene            complement(744..>1116)
                     /locus_tag="VFD73_17750"
     CDS             complement(744..>1116)
                     /locus_tag="VFD73_17750"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HZI75828.1"
                     /translation="VLDAAMGTQRADFGNIQLYDRETGTLAIVVHRGFSQAFLDYFAR
                     VDAHGTSACGQALKSSARIIIEDVTTDPSYAPHRAIAAAAGYRAVQSTPLIDPPVRAR
                     RSGCCRPIFAVTTGHRAGICP"
BASE COUNT          191 a          360 c          359 g          206 t
ORIGIN      
        1 tgccctcctc tggatcagga tccatgagcc gcgccaagct ggccaaagac catgctccgc
       61 tcgtctccat gagcatggga cgggccggga gtgccggttc atccgcggtc agtctcggcc
      121 cgaggcggcg ggggctgggc agatcccgcc gccgttcagg agcgcctcgg ctgcggcgct
      181 cacatccgcg tcagtgctcg gttctgcgcg gcatggccgg agccaagcct ccctgcagac
      241 gcaacccttg caggcacacc tccaaccgct cccggttggc cctgtggcac tgctccaagt
      301 cagccaagag gcggtctttc acgtgccttg gtccggacca gctctccagc tgatcccgct
      361 ggatctcgtg ctggagctcc aggtcggcca agagggcgag ggtgcgctgc agctggggca
      421 agaggtcatc cggatagaac ggcgcctccg ctcgatctaa tcgagtcggc atcatctttc
      481 ctccctgtcg tttttgtttg cgcataggtc atggacgtca cggctcatgg acgtcacgac
      541 ctgacgcacg tcgtaaacgt gcgaaaccgt acacaataag ctgacttttg gcgaactcgt
      601 ggcagcttcg ctgaaatgcg gtgagccagt gccgcgctgg gcgttcttaa gccaggaccc
      661 acacagcccc ggagagcgct attgcctttg tgcggcgagg ctgaaggcaa tcacatcagc
      721 cgcctgccgg gcatagcggt ctgctaggga cagatcccgg cccgatggcc ggtggtgacc
      781 gcgaaaatgg gtcgacagca tcccgaccgg cgtgcccgta cgggggggtc aatcagcggg
      841 gtggactgga cggcacgata gcccgctgcg gcagcgatgg cccggtgtgg cgcgtagctg
      901 ggatcggtcg tgacatcttc aatgatgatg cgggcgctgc ttttcagtgc ctgcccgcag
      961 gccgacgtgc cgtgagcgtc cacccttgca aagtagtcca ggaacgcctg gctgaaccca
     1021 cggtgcacaa caatcgccag ggtccctgtc tctcggtcat acagctggat gttgccgaag
     1081 tcggcccgct gcgtgcccat cgcagcatcg agcacc
//
LOCUS       DASRPQ010001560         1002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4576402, whole genome shotgun sequence.
ACCESSION   DASRPQ010001560 DASRPQ010000000
VERSION     DASRPQ010001560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4576402"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1002
                     /locus_tag="VFD73_17755"
     CDS             <1..>1002
                     /locus_tag="VFD73_17755"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI75829.1"
                     /translation="RYAIERLIGEGGMATVYLANDIRHERKVAIKVLRPELAASIGAD
                     RFLREIKVAARLQHPNILPLYDSGEAASFLYYVMPFVEGESLRALIDREQQLSLPDAI
                     QITCEIADALFYAHSQKVIHRDIKPENILLRDGRALVADFGIARALSQASEKLTETGM
                     AVGTPHYMSPEQALAGANIDGRTDQYSLGCMVYEMLVGQPPFHGPNAMAILARHSLES
                     VPSLQVVRTSIPDEVEDAIMRALEKTPADRFPTIRDFADTLAEIDLGTAARRTSSRSM
                     RARRSTPQRLARRSGSVPTKQGLPVRIAAFVRTGRGRLWAGAAALIVIAGGVLGWTIW
                     "
BASE COUNT          182 a          328 c          309 g          183 t
ORIGIN      
        1 cgctatgcca tcgagcgcct gattggcgaa ggcggcatgg ccaccgttta cctggccaat
       61 gacatccggc acgagcgcaa agttgccatc aaggtgctcc gtcccgagct cgccgcgtcc
      121 ataggtgccg atcggttcct ccgcgagatc aaagtcgcgg cccggctgca acaccccaat
      181 atcctgccgc tctacgactc gggcgaggcc gcgagcttcc tctactatgt catgccgttc
      241 gtggaaggcg agtcgctccg cgccctcatc gaccgggaac agcagctctc gctgcccgac
      301 gcgatccaga tcacctgcga gatcgctgat gccttgttct atgcccacag ccagaaggtc
      361 atccatcgcg acatcaagcc ggagaacatc ctccttcggg atggccgagc cctggtggcg
      421 gatttcggaa ttgcgcgtgc gctcagccag gccagcgaga agctgaccga aacgggcatg
      481 gcagtaggca ctccccacta catgagtccg gagcaggccc tggccggcgc caacatcgat
      541 ggccgaaccg atcagtacag cctgggttgc atggtgtacg agatgctggt cggccaacct
      601 cccttccatg gccccaatgc catggcgatt ctggcgcgac actcgttgga atcggtgccc
      661 agcctgcagg tggtgcgcac ctcgattccc gacgaggtgg aggacgcgat catgcgggcg
      721 ctggagaaga ctcccgccga tcgttttccc accatccggg acttcgccga tacgctggcg
      781 gagatcgacc ttggcaccgc ggctcgccgg acatcttcgc gttccatgcg ggcacggcgg
      841 agtactcccc agcgccttgc caggagaagc ggcagtgtcc ccacaaaaca gggccttccg
      901 gtgcgcatcg ctgcgttcgt gcgaaccgga agaggacggc tctgggccgg tgcggcagct
      961 ttgatcgtta ttgctggagg agttttgggc tggaccatct gg
//
LOCUS       DASRPQ010001561         1009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1454678, whole genome shotgun sequence.
ACCESSION   DASRPQ010001561 DASRPQ010000000
VERSION     DASRPQ010001561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1454678"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            292..714
                     /locus_tag="VFD73_17760"
     CDS             292..714
                     /locus_tag="VFD73_17760"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HZI75830.1"
                     /translation="MARFSSPFDTLLNLQQALDAFRTSGWLDAGPSGGGAYPPVNVFR
                     KGEDFVILAEVPGVRKSDLELQVKGNTIRISGSKAVSYPEQAGVHRRERLGGRFDRVV
                     TLPVEIDADGVQAECRDGILALLLPRAERDKPRTIQVS"
     gene            752..>1009
                     /locus_tag="VFD73_17765"
     CDS             752..>1009
                     /locus_tag="VFD73_17765"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HZI75831.1"
                     /translation="MANPQELAVREKKELATKEEKTVPGRFYVPHTDVYETEDTLTVV
                     MEMPGVDRKDVAVELKDDVLRVEGRIDFAKYEGMEPVYAEYN"
BASE COUNT          194 a          291 c          362 g          162 t
ORIGIN      
        1 agccctgcca ttgagaggcc tgtccagtct caggtttccc caattatggc acccacctct
       61 accttgtgag aagcgggctt ctcacaagcc agaaggggcc ggctgtcgaa gtgaggcagg
      121 gcaggggagg gttaggcggt cgatggcaac atctccctct tgaccccgct gcggtggctt
      181 cccattcgat tggcgctcca ggcaggagag tgccaagctg accccggagt gggcgacgga
      241 gggtagacgc gcttggtgcc cctgccttcg gcagaaggga ggaactgggc tatggcgcga
      301 ttttccagtc cctttgacac gctgctgaac ctgcagcagg cgctggatgc cttccgcaca
      361 agtggttggc tcgatgctgg gccgagcggc ggtggcgcgt atccgccggt caacgtcttt
      421 cggaagggcg aggacttcgt gatcctcgct gaggtcccgg gcgtcaggaa gtccgacctc
      481 gagctgcagg tgaagggcaa cacgatccgc atctccggta gcaaggcggt gagctacccc
      541 gaacaggcgg gtgtgcaccg gcgggagcgg ctcggcggcc ggttcgaccg ggtggtcacc
      601 ctcccggtcg agattgacgc ggacggcgtg caggccgaat gccgcgacgg catcctggcg
      661 ctgctgctgc cgcgtgccga gcgcgacaaa ccgaggacga tccaggtgag ctgacagaca
      721 gagaggcagt cccgagctga tggagggagc gatggcaaac ccgcaagaac ttgccgtacg
      781 cgagaagaag gagttggcca ccaaggagga gaagacggtc ccaggccgct tctacgtccc
      841 ccacaccgac gtgtacgaga cggaggatac gctgacggtg gtcatggaga tgccgggcgt
      901 ggaccgcaag gacgtcgccg tcgagctgaa agacgatgtg ctgcgggtgg agggccggat
      961 cgacttcgcc aagtacgagg gcatggagcc ggtctacgcg gagtacaac
//
LOCUS       DASRPQ010001562         1588 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2996804, whole genome shotgun sequence.
ACCESSION   DASRPQ010001562 DASRPQ010000000
VERSION     DASRPQ010001562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2996804"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..234)
                     /locus_tag="VFD73_17770"
     CDS             complement(<1..234)
                     /locus_tag="VFD73_17770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75832.1"
                     /translation="MRSSSSVGTKTSPFQIAHPNGWTVRKARGTSVIAGWLGRPATTV
                     RGWLRAFTRRAEQVRLVFTALAASLVTDPPLPGP"
     gene            207..1405
                     /locus_tag="VFD73_17775"
     CDS             join(207..471,471..1405)
                     /locus_tag="VFD73_17775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612020.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZI75833.1"
                     /translation="MSRPKKSFSPEFKDEAVKMVIETSRPIARVAKELGINEGTLGNW
                     VGIYRREHAGEEPPLTVSERARLRELERETRELKIELEFMKKAAGILRPRPSVTEKFE
                     FIDAEYAAYQESGDEYVPSIVKMCIWMEVSRSGFYEWRNAPESATARRRGILALYVQK
                     SFADSDDTYGYRRVHADLVAWGVPAGPELVRSLMRELGLEPCQPRPWRVSLTEGDGQE
                     HDIPDLVARDFTADAPGAKMVGDITYISTWEGWLFLATVIDCHTKEVIGWAADDNYKT
                     PLIEKAIEMAARNYPLAENAIFHSDRGSNYTSSQFATTLKKYGLRHSAGRTGICYDNA
                     MAESFFAALKNERVYRTQYPTREHARRDVVRYIEFWYNSKRRHSGLQYRTPQQVHNEY
                     LEQQSAA"
BASE COUNT          338 a          497 c          504 g          249 t
ORIGIN      
        1 cgggcccggc agcggcggat cagtcaccag gctggccgcc agcgcggtga acaccagccg
       61 gacctgctct gcacgccggg taaaggcccg cagccagccc cgcaccgtcg tcgccggacg
      121 gcccagccac ccggcgatca ctgaggtgcc ccgagccttc cggacagtcc atccattagg
      181 atgggcaatc tggaaaggtg aagtttttgt cccgaccgaa gaagagcttc tcaccggaat
      241 tcaaggatga agccgtgaag atggtgatcg agacgtcgcg cccgatcgcc cgagtggcga
      301 aggagctcgg tatcaacgaa ggcaccctcg gaaactgggt tggcatatac cgccgcgagc
      361 acgccggcga ggaaccaccg ctgaccgtga gtgagcgcgc gcgattgcgc gagctcgagc
      421 gggaaacccg ggaactgaag atagagcttg agttcatgaa aaaagccgca gcatacttcg
      481 cccgcgacca tcggtgaccg agaaattcga gttcatcgac gcggagtatg cggcttacca
      541 ggaatcaggc gatgaatacg tgccgtcgat cgtgaagatg tgcatctgga tggaggtatc
      601 gaggtccggg ttctacgaat ggcggaacgc gccggaatcg gcgacggcga gaaggcgcgg
      661 gatactcgcg ctgtacgtgc agaagtcatt cgccgattcg gatgacacgt acgggtaccg
      721 ccgggtccac gcggatctcg ttgcgtgggg cgtgccggcc gggccggagc tggtccggtc
      781 gctgatgcgc gagctgggcc tggagccgtg ccagccgcgg ccctggcggg tcagcctcac
      841 cgagggcgac ggccaggagc acgacattcc cgatctcgtg gcccgggatt tcactgctga
      901 tgcgccgggc gcgaaaatgg tcggcgatat cacctacatt tcgacatggg agggctggct
      961 tttcctggct accgtcatcg actgccacac gaaggaggtg atcggctggg ccgcggatga
     1021 taactacaag accccgctca tcgagaaggc catcgagatg gcggcccgca actacccgct
     1081 cgccgagaat gcgatcttcc actccgaccg cggcagcaat tacacttcca gccagttcgc
     1141 gacgacgctg aagaaatacg gcctccggca ctccgccggc cgcaccggaa tctgctatga
     1201 caatgcgatg gccgagtctt tcttcgcggc actgaagaac gagcgtgtct accgcactca
     1261 gtatccgacc cgcgagcacg cgcgccgcga cgttgtgagg tacatcgaat tctggtacaa
     1321 ttcaaaacgt cggcactccg ggcttcagta ccggaccccg cagcaagtcc acaacgagta
     1381 cctggaacag cagtccgcag cgtgaattaa ccacaaatcc gctgtccgga aagctcgggg
     1441 cagatcaccg gcccgcaagg cccccggcag ccgaggaccc gcttgatcca gcactccagg
     1501 ccaagcgtac cgggatgggc cccaccggca gcggccggtc atggcctgct gagattggcc
     1561 catcctgaac tgactcaaac gaaggaac
//
LOCUS       DASRPQ010001563         1378 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4249473, whole genome shotgun sequence.
ACCESSION   DASRPQ010001563 DASRPQ010000000
VERSION     DASRPQ010001563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1378
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4249473"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..805
                     /locus_tag="VFD73_17780"
     CDS             59..805
                     /locus_tag="VFD73_17780"
                     /inference="COORDINATES: protein motif:HMM:TIGR00633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HZI75834.1"
                     /translation="MKFATWNVNGIRARASQLHEWMERERPDVVCLQELKAELTQVPE
                     ILRRQEYHAFWHCCKGYSGVSLQLRKDSFPAEPVFRHPPFDLESRVVTAELGNLVTAS
                     MYVPNGGKDYPAKIAFLKQTIEWAGALCRDGRELLLCGDLNIARGEIDVHPRERKPNG
                     VGQRPEERALFRELLDTGLTDVWRAMDPDNAGLFTWWAPWRNLRARNIGWRLDYMLAS
                     RGLFAQTQRCVVQSEVGTSDHAPVVMEVTS"
     gene            complement(807..>1378)
                     /locus_tag="VFD73_17785"
     CDS             complement(807..>1378)
                     /locus_tag="VFD73_17785"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HZI75835.1"
                     /translation="FTTEGVAAGDFDADGQIDVAVATSDPRAAVLVFHGLGTGEFSAP
                     SALPPLPAQPQVSDGTSAVSVGDLNGDGRDDIVTAAFQLSNQLVIRLSSGSGFAEPVP
                     LPLPAPVDVQLSDLNGDGKLDAVASNLGQSVSLLSGAGDGTFEAPVGLSMGPEPVSLA
                     VADFDGDGRADIAVADLRDNAIRVRLSPR"
BASE COUNT          251 a          458 c          453 g          216 t
ORIGIN      
        1 aaacggaccg acaggtctga gcgaaaccga ggagcctggc atctcttaga attccgttat
       61 gaaattcgcc acctggaacg tcaacggcat tcgcgcgcgt gcctcccagc tgcacgagtg
      121 gatggagcgc gagcggcccg acgtcgtgtg tctccaggag ctcaaggcgg agctgaccca
      181 ggtgcccgag atactccgcc ggcaggagta ccacgccttc tggcactgct gcaagggata
      241 ctccggtgtg tcgctccagc tgaggaagga cagcttcccc gcggagcccg tcttccgcca
      301 tccaccgttc gatctggagt cgcgggtggt caccgcggag ctgggcaacc tggtgaccgc
      361 gtcgatgtac gtccccaacg gaggcaagga ttaccccgcc aagatcgcct tcctgaagca
      421 gaccatcgag tgggccggcg cgttatgccg ggatggtcgc gagctcctcc tctgcggcga
      481 cctcaacatc gcgcgcggcg agatcgacgt gcacccgcgc gagcggaaac ccaatggagt
      541 cggccagcgg ccggaggagc gtgccctctt ccgggagttg ctcgacaccg ggctgaccga
      601 tgtctggcgg gcgatggacc cggacaacgc cgggctgttc acgtggtggg cgccctggcg
      661 caatctccgg gcgcggaaca tcggctggcg tctggactac atgctagcgt ccaggggcct
      721 cttcgcccag acgcagcgct gcgtcgtaca atcggaggtg ggaaccagcg atcacgcgcc
      781 ggtggtcatg gaggtgacga gctagctcag cggggactca accgcacccg aatcgcgttg
      841 tcgcgaaggt cggcaacggc gatatcggcc cggccgtccc cgtcgaaatc agcgaccgcg
      901 agcgacaccg gctccggccc catggatagg cccaccggcg cctcgaaggt gccgtcacca
      961 gcaccgctca acagtgacac gctctgaccg aggttggagg caacggcgtc cagctttccg
     1021 tctccgttca gatcggacaa ctgcacgtcc accggcgccg gcagcggcag cggcaccggt
     1081 tcggcaaagc cggacccgct gctgagccgg atgaccagct gattgctgag ctgaaaggcc
     1141 gcggtcacga tgtcgtcgcg gccatcgccg ttcaggtctc ccacagagac tgccgaggtc
     1201 ccatcgctga cttggggctg cgccggaagc ggcgggagag cgctcggcgc gctgaattca
     1261 ccggtaccca atccatggaa gaccagcacc gcagcccggg gatcgctggt tgcgactgca
     1321 acgtcgatct gtccatctgc gtcgaaatcg cccgcggcca caccctcggt agtgaagt
//
LOCUS       DASRPQ010001564         1478 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1454807, whole genome shotgun sequence.
ACCESSION   DASRPQ010001564 DASRPQ010000000
VERSION     DASRPQ010001564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1478
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1454807"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1478
                     /locus_tag="VFD73_17790"
     CDS             <1..>1478
                     /locus_tag="VFD73_17790"
                     /inference="COORDINATES: protein motif:HMM:NF012873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="condensation domain-containing protein"
                     /protein_id="HZI75836.1"
                     /translation="AEEELLLDMWQQVLGVEQISIDDDFFELGGHSLLATQVIARIRQ
                     VFQVELGLRMLFEEPTIAGLSEAVRAQLRQGQVSVKPELKRGERGAVVELSYAQQRLW
                     FNEQMGAGSTFYNVPVAVRLRGELDVSALGRTLQEIVRRHEVLRTRIELMGTKPYQVI
                     DEEVQLRLPVIDLSELAEQSRAAVGERVKREEASERFNLSTGPVIRAKLIKQGRQDHL
                     LLVTMHHIVSDGWSMGVLVKEVSALYEAYRRGAESPLAELPVQYADYALWQREWLQGE
                     VLEEQLKFWEEKLAGAPLQVELPTDRARGAMRAGGGRAGQLRVEFDEELTRGVKQESR
                     KQALTVYMLLMGVVGVLLTRYSRSQEVVIGSPIANRMMAEVEGLIGFFVNTLALRVRV
                     EEEETVEELLRRVREEVLGAYAHQDVPYEKVVERVQVERAGEAGGLFQVMVAMQNAPR
                     GEMRMEGLELAAESVGNERAKFEISIGLGEVGGRLVGGVEYN"
BASE COUNT          319 a          297 c          625 g          237 t
ORIGIN      
        1 cggcagaaga agagttgctg ctggatatgt ggcagcaagt gctcggcgtt gagcagatca
       61 gtattgacga cgacttcttc gagttgggcg ggcactcgtt gctggcgacg caggtgatag
      121 cgcggatccg tcaggtgttc caggtggagc tcgggctgcg aatgctcttt gaagaaccga
      181 cgatagcggg gctgagcgag gcggtaaggg cgcagctacg gcaggggcaa gtgagtgtga
      241 agccggagct gaagcgcggc gagcggggag cagtagtcga gttgtcctac gcgcaacagc
      301 ggctgtggtt caacgagcag atgggagcag ggagcacgtt ctacaacgtg ccggtggcgg
      361 tgcggctgcg aggcgagttg gatgtcagtg cgctgggaag gacgctgcag gagatagtgc
      421 gaagacacga ggtgctgcgg acgaggatcg agctgatggg gaccaagccc tatcaggtga
      481 tcgatgagga agtgcagctg aggctgccgg tgatagacct gagtgagctg gcggagcaga
      541 gcagggcagc ggtgggcgag cgtgtgaagc gggaggaggc gagtgaaagg ttcaacctca
      601 gcactggacc agtgatcaga gcgaagctga tcaagcaagg ccggcaggat catctgcttt
      661 tagtaacgat gcaccacatc gtgtcagacg ggtggagcat gggagtgctg gtgaaggaag
      721 tgagcgcact gtacgaggcc taccggcgcg gagcggagtc gccgctggcg gaattgccgg
      781 tgcagtacgc agactacgcg ctgtggcagc gggagtggtt gcagggcgag gtgctggaag
      841 agcaactgaa gttttgggag gagaagctgg cgggagcacc gctgcaggtg gagttgccga
      901 cggaccgggc gcgaggagcg atgcgagccg gaggcggaag agccggacag ttgcgcgtgg
      961 agttcgacga ggagttgacg aggggagtga agcaggagag ccggaagcag gcgttgacgg
     1021 tttacatgct gctgatggga gtggtggggg tactgctgac gcggtacagc cgcagccagg
     1081 aagtggtgat cgggagtccg atagcgaacc ggatgatggc ggaggtggag ggtctgatcg
     1141 gtttcttcgt gaacacgcta gcactgaggg tgagagtaga ggaggaagag acagtcgagg
     1201 agttgctgcg acgagtgcga gaagaagtgc tgggagcata tgcgcatcag gacgtgccgt
     1261 acgagaaggt ggtggagcgg gtgcaggtgg agcgcgctgg cgaagcaggc gggctgttcc
     1321 aggtgatggt ggcgatgcag aacgcgccgc gaggcgagat gcggatggag gggctggagc
     1381 tcgcggcgga gagtgtggga aacgagcggg cgaagtttga gatatcgatc gggctgggag
     1441 aagtaggcgg gcggctggtc ggcggagtgg agtacaac
//
LOCUS       DASRPQ010001565         2835 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_806554, whole genome shotgun sequence.
ACCESSION   DASRPQ010001565 DASRPQ010000000
VERSION     DASRPQ010001565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2835
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_806554"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..584)
                     /locus_tag="VFD73_17795"
     CDS             complement(<1..584)
                     /locus_tag="VFD73_17795"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HZI75837.1"
                     /translation="MRHIPEEELHAYLDQALSRSQCVEIESHLAACPTCQAARDGIAA
                     LRDRTTALLARLAPPRNFPPSFDLLRSRAAVSADQHRRRVHRGAWAASLVAAVGLGWT
                     ANYLTSARLTTPTRIVHPVAVAAKQPTPPNPATLTSHPVPVSSHRTRPANHPVARQVE
                     NPAQDSGSHRTAVPVVPAPVLQLSSIDIPRTDFE"
     gene            complement(568..1083)
                     /locus_tag="VFD73_17800"
     CDS             complement(568..1083)
                     /locus_tag="VFD73_17800"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZI75838.1"
                     /translation="MDELEQLYQTTYTAVVRFLYRKVWDAERAEDLAQEVFVRALTHR
                     PEKPRAWVFAVAANLARDEARAAVRRRRHLTLLKGDPVALPTIQPAADTLVEHDERMA
                     AVQDALSTLTHRDREILLLWDAGLSYPEIAAQTGLAVGAVGTTLARARRRLVEAHDRQ
                     HAPQGDHAAHS"
     gene            complement(1174..1971)
                     /locus_tag="VFD73_17805"
     CDS             complement(1174..1971)
                     /locus_tag="VFD73_17805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75839.1"
                     /translation="MSAVVRPRPQSSTLEVPPCRGLGSQCRAVPVTLRVGPLEEGTAS
                     LDHEATWLIGHTQRITFYDLWDDGGELYVDAMLHVSCRYLRQDGAEAACAVHGFRGPA
                     PREPRRPEQPRRLTRDRFLIVENRRTAVRRLPEPARSLPVLSSGNPCALAPCRTADNL
                     RGAACCRDLQIEIMCTKRQRKLEALVRSRRSPYLCKVERAGDYSIEAEVISACSYLDD
                     DGIGCALHNRRRRDGRAAKPDLCSDWPERKRDLHPGCVFGRQSNGSR"
     gene            2136..2639
                     /locus_tag="VFD73_17810"
     CDS             2136..2639
                     /locus_tag="VFD73_17810"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HZI75840.1"
                     /translation="MRMTSMVAGLGFVVVACGGGNKSSNEQTSGAPGQQETTATSAPA
                     ANAPAATAPAGTGKTHDVNMELDGSKYKYDPDNLTIKAGDVVRFHNKSGGPHNVSFWP
                     DSVPSGAADVLKKNMPDQMAPLQSPLETEPDAVYQISFAGAPKGEYKFYCLPHLALGM
                     HGKLTVQ"
BASE COUNT          527 a          891 c          942 g          475 t
ORIGIN      
        1 atttcgaaat cggtccgtgg aatgtcgatc gatgaaagtt gcaggaccgg cgccgggacc
       61 actggaaccg ccgtccggtg cgagccggaa tcctgggccg ggttctccac ctggcgcgcg
      121 accgggtggt tggccgggcg ggtacgatgg gatgagacag ggactggatg agaagtgaga
      181 gtggcggggt tgggtggtgt cggctgtttc gctgcaacgg cgacgggatg cacgattcgc
      241 gtaggggtgg tgagtcgggc gctcgtcagg tagttcgccg tccagcccag gcccacggct
      301 gccacgaggc tggccgccca cgccccgcga tggacccgcc ggcgatgctg gtcggcggat
      361 accgcagccc ggctccgcag caaatcgaaa gatggcggaa agttgcgcgg gggtgccagc
      421 cgcgccaaaa gtgccgtcgt gcggtcgcgc agtgcagcaa tgccgtcccg ggctgcctga
      481 caagtaggac acgcggccaa atgactttca atctcgacgc actgagaacg gctcaaggcc
      541 tggtcgagat acgcgtgaag ctcctcctca ggaatgtgcc gcatgatctc cttggggtgc
      601 gtgctgccgg tcgtgtgcct ccaccagccg gcgacgggcc cgagccagcg tggtgcccac
      661 cgcaccgacc gcgagccccg tctgagccgc aatctcaggg tagctcagcc cggcgtccca
      721 cagcagcaga atttcccggt cccgatgagt caaggtgctc aaggcgtcct gaactgccgc
      781 catgcgctcg tcgtgctcga ccagggtgtc ggctgccggt tgaatggtcg ggagcgccac
      841 cggatcaccc ttgagcagcg tcaggtggcg gcggcggcgg acggcggcgc gggcttcgtc
      901 tcgggccaga ttggccgcaa ccgcaaagac ccaggcgcgc ggcttttccg gccggtgggt
      961 gagcgcccgg acgaacacct cctgggccag gtcttcggcg cgctccgcgt cccacacttt
     1021 ccggtagaga aagcgaacaa ctgcggtgta cgtcgtctgg tagagctgtt ccagctcgtc
     1081 cattaagagc gctccgagga cactgctccc gctaccacca gccgggtcgt cccagaggac
     1141 ggcacagcca gaggaacttg cacatgattg tggtcagcgt gacccattgc tctgccggcc
     1201 gaagacgcag ccgggatgca gatcccgctt ccgttccggc caatcactgc agaggtccgg
     1261 cttggccgcc cggccatccc tccgccgccg attgtggagg gcgcagccaa taccgtcgtc
     1321 gtcgaggtaa ctacacgctg aaatcacctc ggcttcgatg gagtagtcgc cggcccgctc
     1381 caccttgcag agatacggcg agcggcgcga tcgcaccaga gcctcgagtt tgcgctggcg
     1441 tttggtgcac atgatctcga tctggagatc gcggcagcag gctgcaccgc ggaggttgtc
     1501 cgccgtccgg cagggggcga gggcacaggg gtttccactg ctcaggacgg gcagcgaccg
     1561 tgccggttcg gggagtctgc gcacggcagt ccgccggttc tccacgatga gaaaccgatc
     1621 ccgagtgagc cggcgaggct gctccggccg gcgcggctcg cgcggtgccg gaccgcggaa
     1681 cccatggact gcacatgcgg cttcggctcc atcctgacgc agatatctgc atgagacgtg
     1741 gagcatcgcg tccacgtaca gctcgccgcc gtcgtcccaa aggtcgtaga atgtgatccg
     1801 ctgcgtatgc ccgatcagcc aggtggcttc gtggtctaag gaggcagtgc cttcttccag
     1861 tggtcccact cgcagagtga ctgggaccgc ccggcactgg ctgcccagtc cgcggcaagg
     1921 cggaacttcc agagtcgagc tttgaggacg ggggcgaacg acagcgctca tggaaggcat
     1981 tccaggaagt agaccggcaa ttcccctaaa ctaaccctga tgtgtcgcgc atcacacaac
     2041 gtcactttgc cctcttccgt ttactactcc cctgcttata gtgaatgggt tcacaagcag
     2101 ggttactctc atgttaccgg aggcggagcg gcgaaatgcg gatgacttcg atggtagcgg
     2161 ggctagggtt tgtggtggtg gcgtgtggtg gcgggaataa gagtagcaac gagcaaacct
     2221 cgggagcccc cggacaacag gagacgacgg caacgagtgc gcctgcggcg aatgctcccg
     2281 cagccacggc acctgccggt accggcaaga cgcacgacgt gaacatggaa ctcgacgggt
     2341 ccaagtacaa gtacgacccg gataacctga ccatcaaggc tggagacgtg gtccggttcc
     2401 acaacaagag cggcgggccg cacaacgtct cgttctggcc tgatagcgta ccgagtggcg
     2461 cggccgatgt tctcaagaag aacatgcccg atcagatggc gccgctgcag agcccgctcg
     2521 agaccgagcc ggacgcggtg tatcagatca gctttgccgg cgcgcccaag ggcgagtaca
     2581 agttctactg tctgccccac cttgcgctgg gaatgcacgg gaagctgacc gttcagtaat
     2641 gcggtgagcg gtgagcggga caccgctcac cgctttaccg ggttcatcct ctccaccacc
     2701 gcagtcacca ggccccccac caagagccca gccagcgcgt ccaccccata gtgcatctgg
     2761 caatagacca cgccaagcgt gagcagcgca gtcgggacca gtagaattag tccgagccgg
     2821 cgtgacgctc gcagt
//
LOCUS       DASRPQ010001566         1893 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2725936, whole genome shotgun sequence.
ACCESSION   DASRPQ010001566 DASRPQ010000000
VERSION     DASRPQ010001566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1893
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2725936"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VFD73_17815"
     CDS             complement(<1..268)
                     /locus_tag="VFD73_17815"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI75841.1"
                     /translation="MLAYIDAMPDSATGFKPTPGVRTFAEQFDHIVSTNLYVAAVALR
                     GQKAPPTLGDSTVYLHDKAALRRYAEATYDYFLDALQKAKPAQLA"
     gene            complement(400..1005)
                     /locus_tag="VFD73_17820"
     CDS             complement(400..1005)
                     /locus_tag="VFD73_17820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75842.1"
                     /translation="MRIAFLPILLFGICLSAEAQSPQLEIEAGLGYARIFHGGGFSVS
                     GVLDKPIGSGLEPIQQAVGFGLWYAQTKIASAQADLRHRNIFGTGVRYRLATRGCCGP
                     MHPFLAVPLQLLRSSIEEFTQPIAALTSHAVPQPPPAPPVEDSPGGAWGWGTGIEVGV
                     ELSLARNLSCQTRVQALYQDIYTGAASNTAWTWHAGLRYGF"
     gene            complement(1032..1433)
                     /locus_tag="VFD73_17825"
     CDS             complement(1032..1433)
                     /locus_tag="VFD73_17825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75843.1"
                     /translation="MARFSRRVVIVAGFIIGLGIWLIPAGFMNVFEPWDGNGPAYPLV
                     LLITGLLLGFLGPSRPAAAVMGVFLGQLAMLLWRVATSPENSELWLVGIVVLAGYTSV
                     ATGIGAVLGSRLRRWLAPEPGVERRVADRRL"
     gene            1536..>1893
                     /locus_tag="VFD73_17830"
     CDS             1536..>1893
                     /locus_tag="VFD73_17830"
                     /inference="COORDINATES: protein motif:HMM:NF015909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2 family protein"
                     /protein_id="HZI75844.1"
                     /translation="MDKYRVRPDETVDLGDHDPDDTRLLPGGKDEARKKNLELQGRLG
                     NLQELLYAGHEHKLLIVLQGMDTSGKDGTISHVMGGFNAAGTRVASFRKPSEEELDHD
                     YLWRVHQQVPGKGEVVV"
BASE COUNT          388 a          555 c          619 g          331 t
ORIGIN      
        1 gagcaagctg ggccggcttt gccttctgga gcgcgtcgag aaagtagtcg taggtggcct
       61 cggcatagcg gcgcagtgcc gccttgtcgt ggagataaac cgtgctgtct ccgagggtcg
      121 gcggggcttt ctgaccgcgc aacgcgaccg ccgcaacgta caggttggtg ctcacgatgt
      181 gatcgaactg ctcggcaaag gtgcggacgc cgggtgtagg tttgaacccg gttgccgagt
      241 ccggcatcgc atcgatgtag gccagcactg tcgagcggtt tcgttgctaa tcggtgagaa
      301 gatcgggata actcctgatt tgagcctgca gcagcgaggg aatggcgagg atgatgagaa
      361 gagcgggtga gcgcacgatt ggtcctgggt tacgagtggt cagaagccgt agcgaaggcc
      421 ggcatgccac gtccaggctg tattgctggc cgctccggtg tagatgtcct gatacaaggc
      481 ttggacgcgg gtttggcagc tcaggtttct ggcgaggctc aactccactc cgacctcgat
      541 gccggtaccc catccccagg ctcctcctgg ggaatcctca actggtggcg caggcggagg
      601 ctgaggcaca gcgtgagagg tgagtgcagc tatcggctgg gtgaactcct ctatagaact
      661 acgcagcagc tgcagtggca ctgcgagaaa cgggtgcatc gggccgcagc agcctcgggt
      721 tgcaagccgg tagcgcactc cagtgccgaa gatattgcgg tgcctgaggt cggcctgcgc
      781 ggaggcaatc ttcgtctggg cgtaccacaa gccgaaaccg accgcctgct gaatcggctc
      841 gaggccggaa ccgatcggtt tgtcgagaac tccggaaaca ctgaacccac cgccgtggaa
      901 gatccgggcg taccccagcc cggcctcgat ctccagttgg ggactttgtg cctcagctga
      961 aaggcagatg ccgaacaaca ggatgggaag aaaggcgatt cgcatctgac tgctcgcgac
     1021 cgaaggatgg ctcagagtcg tcggtcggca actctgcgct cgactcctgg ttccggcgcg
     1081 agccagcggc gaagtcgact tcccagaacc gcgccgattc cggtcgcgac cgacgtgtag
     1141 ccggccagga ccacaattcc taccagccag agctcgctgt tctccggact ggtcgccact
     1201 cgccacagta acatcgcgag ttgtccgagg aagacaccca tcactgctgc tgccggccgg
     1261 ctgggaccca ggaacccgag cagcagcccg gtgatcagca gtaccagcgg gtatgcaggg
     1321 ccgtttccat cccacggctc gaaaacgttc atgaaccctg cgggaatgag ccaaatgccc
     1381 agcccgatga taaatccggc gacgatcact acgcggcgag agaaacgcgc catgcgggcc
     1441 tcctcgtccc acagtatgca gttggttggg ggaccgccag cggtcttttc accgggcgca
     1501 ctggtcggca ccgaaaaact gaaccatcat tgagaatgga caagtatcgc gtgcgcccag
     1561 acgagacggt agatctcggt gaccatgatc ccgacgatac ccggctgctg ccgggcggga
     1621 aggacgaggc gcggaagaag aacttggagc tccagggccg gctcgggaac ctccaggagc
     1681 tgctctatgc cggtcatgag cacaagctgc tcatcgttct gcaagggatg gatacctcag
     1741 gcaaggacgg aacgatcagc cacgtcatgg gcggcttcaa cgccgccggt acccgagtcg
     1801 cctcctttcg aaagccctca gaggaggagc tggaccatga ctacctgtgg cgggtgcacc
     1861 agcaggtgcc cggcaaaggc gaagtggttg tct
//
LOCUS       DASRPQ010001567         1246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1455463, whole genome shotgun sequence.
ACCESSION   DASRPQ010001567 DASRPQ010000000
VERSION     DASRPQ010001567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1455463"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            382..>1246
                     /locus_tag="VFD73_17835"
     CDS             382..>1246
                     /locus_tag="VFD73_17835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75845.1"
                     /translation="MATSVTSRIEQDTLPQPTLSLAFELGKDTWKLGFTIGMAQPPRE
                     RTIPAGDVARLQQEIARAKQRFGLLADAHIMSCYEAGRDGFWLHRYLVAQGITNHVID
                     SASIEVNRRQRRAKTDRLDVRKLLTMLLRHSAGEKKVWSVVRVPSVDEEDRRQLHRDL
                     TTTKQDRTRVINRIKGLLAGHGVQLTLQGDVDAQLEQVQQWDGSPLPSALRTRLKRAW
                     QQVGFLTAHIQTLEAERRALWRRREDPVIAQVRQLFTLRGIGVHSAWLYVMEFFAWRD
                     FQTPKQMGALAG"
BASE COUNT          238 a          367 c          404 g          237 t
ORIGIN      
        1 tatatgtggg atggcgctgg ggtcgtttat ggggctcggt catgcgtggc accattggct
       61 gtcggggttg atgatgtcaa agcatgatgc tcggttcagc cgacgtcaag agcacctggg
      121 ggatttatgc accaaagcca cctgctgacg gtgctctccg gagcaactta agatgcgatt
      181 accctgcgca agcgtcgagt acgcgaccga cgcgctcagg tgtggtatca tggccgttgt
      241 gggtcgctgt cgtcgtcatg ggttttcgcc tccagggtag acgagtttca tgctgtagat
      301 cctatgtagg ggaggagagc acacactggc cgcggctgtt aagctccttc agcaacccta
      361 ttctcaagaa ggagtgagac aatggcaacc tccgtaacat cccgcatcga gcaggatacc
      421 ctcccccagc ccacgctgtc tctggcgttt gaactgggga aggacacatg gaaactggga
      481 ttcaccatcg gtatggccca accgccgcgc gaacggacga tcccagctgg agatgtcgcc
      541 aggttacagc aggagatcgc gcgggcgaag cagcgctttg gcctgctcgc ggacgcccac
      601 atcatgagtt gctacgaggc tggtcgggat ggattctggc tgcaccgtta cctggtagct
      661 cagggcatca cgaaccatgt catcgactcc gcgagcattg aggtcaatcg gcgccaacgt
      721 cgggccaaga ccgatcggct cgatgtccgc aagctcctca cgatgctgct acgccacagc
      781 gccggcgaga agaaggtgtg gagtgtggta cgcgtcccga gcgtggacga ggaagaccgc
      841 cggcagctcc accgggacct gacgacgacg aaacaggacc gcacccgcgt catcaatcgc
      901 atcaaaggct tgttagccgg ccatggcgtg cagctcacct tgcagggcga tgtcgacgcc
      961 cagcttgagc aggtgcagca atgggatggc tcccccttgc cgtccgccct gcggacgcgc
     1021 ctcaagcgcg cgtggcagca ggtgggcttt ctcaccgcgc acatccagac gctggaggcc
     1081 gagcggcggg ccctctggcg ccgccgggag gacccggtga tcgcccaggt gcgccagctc
     1141 ttcacgctac gggggattgg cgtgcatagc gcctggttgt atgtcatgga attttttgcc
     1201 tggcgggact tccagacgcc caagcagatg ggcgcgttgg ctggcc
//
LOCUS       DASRPQ010001568         2159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2726049, whole genome shotgun sequence.
ACCESSION   DASRPQ010001568 DASRPQ010000000
VERSION     DASRPQ010001568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2726049"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..290
                     /locus_tag="VFD73_17840"
     CDS             <1..290
                     /locus_tag="VFD73_17840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75846.1"
                     /translation="RGQKAPPTLGDSTVYLHDKAALRRYAEATYDYFLDALQKAKPAQ
                     LARPVAIFDQKPQPAIRLAALSFEHAVWTLGQVVPYLRLNGVTPPEYHMPF"
     gene            298..2121
                     /locus_tag="VFD73_17845"
     CDS             298..2121
                     /locus_tag="VFD73_17845"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HZI75847.1"
                     /translation="MPIKYPVVTLLFFIAVCPPAQGQSLTLSSYSCRFVKIPVRDGVH
                     LNTSVCQPNGQHPPLPFLITRTPYGIAGDTAVANDYRFLAAEGYIFVYQDIRGRFGSE
                     GQFVMNHPLHDPADPRGVDESTDTYDTVEWLLHNVPANNGKAGVLGVSYPGFLATMAG
                     IHPHPAVKAISPQAPMTDTWMGDDFFHQGAFRLSYGFEYAGSMELSSDMSVPVPIDLW
                     DTYEWYRRLGPLANVDARYFHGKVPTWEAFVSHPTYDAFWKTRAVQRVLRSPEVPTLT
                     VGGWWDQEDRYGPLATYRALEQRDSVGRNFLVMGPWNHGGWRRAERRMEVVDSGTSEG
                     YLRDVEAPWFAYWLKGQGKVNEPDAYVYDAGLQRWRSFDSWPPKNRVLRSLYLHAGGR
                     VSFDKPADTESASDSFVSDPAHPVPYRSRPVEQTYDPRGSRWRTWETEDQRFVDGRPD
                     VLTWVSGTLDHDLTLAGNVSGKIIASTTGRDADWVVKLIDVFPDSVPEHWEWGGYELM
                     VAHEIMRARYRKSYSAPEPLAPNTPLDFTVDLHQQSYTFQRGHRLMVQIQSTWFPLYD
                     RNPQSWVSNIFKAGPQDFRAATHHIWHTPARPSRVEIDVLP"
BASE COUNT          415 a          683 c          649 g          412 t
ORIGIN      
        1 tgcgcggtca gaaagccccg ccgaccctcg gagacagcac ggtttatctc cacgacaagg
       61 cggcactgcg ccgctatgcc gaggccacct acgactactt tctcgacgcg ctccagaagg
      121 caaagccggc ccagcttgct cgtcccgtgg cgatctttga tcagaagccg caaccggcga
      181 tccgtctggc cgcgctctcg ttcgagcacg ccgtctggac cctcggtcag gtggtcccct
      241 atttgagact caatggggtg acccctcctg aataccacat gccgttttga gcctatcatg
      301 ccaatcaaat acccggtggt cacgctgctc ttcttcatag cagtctgccc accggctcag
      361 ggacagtccc tcacgctgtc gtcctatagt tgccgcttcg tcaaaatccc ggtgcgcgac
      421 ggcgtgcatc tcaacaccag cgtgtgccag ccgaacgggc agcacccgcc attgccgttt
      481 ctcatcaccc gtacgcccta cgggattgca ggcgatacgg cggtggcaaa cgattaccgc
      541 tttctcgccg ccgagggata catcttcgtc taccaggaca ttcggggtcg cttcggaagc
      601 gaaggacagt tcgtgatgaa ccacccgctg cacgacccgg cagacccgcg cggcgtggat
      661 gagagcaccg atacctacga tacggtggaa tggttgctcc acaatgtgcc cgccaacaat
      721 gggaaggccg gagttctcgg cgtgtcctat ccgggatttc tcgccacgat ggcgggaatc
      781 catccgcacc cggcggtcaa ggccatctca ccccaggcac cgatgaccga cacctggatg
      841 ggagacgact tctttcatca gggtgcgttt cgtctgtcgt acggcttcga gtatgccggc
      901 agcatggagc tgagctcgga catgtcggtg ccggtaccga tcgatctctg ggacacctac
      961 gagtggtacc gccgactcgg gccgctcgcg aatgtggacg cgcgctactt ccacgggaaa
     1021 gtgccgacct gggaagcatt cgtcagccat cccacgtacg atgccttttg gaagactcga
     1081 gcggtccaac gggtgttgcg gtcgccggag gttccgacct taacggtggg cggctggtgg
     1141 gatcaggaag atcgctacgg tccgctcgcc acctatcgcg cgctggagca gcgcgattcg
     1201 gtcggtcgca acttcctggt catgggaccg tggaatcatg gcggctggcg cagagcggag
     1261 cgacgaatgg aagtcgtcga ttccggaaca tcggaaggtt acctcaggga cgtcgaggca
     1321 ccgtggtttg cctattggct gaaaggccag ggcaaggtca acgagccgga tgcctacgtc
     1381 tacgatgcgg ggctgcagcg gtggcgctcg ttcgacagct ggccgcccaa gaaccgcgtg
     1441 ctgcgctcgc tgtacctcca tgccgggggc cgagtctcgt tcgacaaacc ggcggacacg
     1501 gagtcggcgt ccgacagctt tgtttcggac cccgcccacc cggtgcctta ccggagccgc
     1561 cccgtggagc agacgtatga tccccgaggg tcgcgctggc ggacttggga aaccgaggac
     1621 cagcgtttcg tagatggaag gcccgacgtg ctgacgtggg tctctggcac gctggaccac
     1681 gatctcaccc tggcaggtaa tgtctccggc aaaatcatcg catccaccac cggccgagat
     1741 gccgattggg tggtcaagct catcgatgtc tttccggaca gcgtaccgga gcattgggag
     1801 tggggaggct atgagctgat ggttgcccac gagatcatgc gggcaagata tcgcaagagt
     1861 tattcggctc ccgagccgct ggccccgaac actcctctgg atttcaccgt cgacctgcac
     1921 cagcagagct acacctttca acgaggccat cgcctgatgg tgcaaattca gagcacctgg
     1981 tttccactct acgatcgaaa tccgcagtcc tgggtctcga atatcttcaa agccggtccc
     2041 caagatttcc gcgcggcaac ccaccacatc tggcacacgc cagcgcgtcc atctcgagtg
     2101 gagatcgatg tgcttccctg agagcgcagg caccaggctc gaaccaggat cagagctgg
//
LOCUS       DASRPQ010001569         2997 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4577595, whole genome shotgun sequence.
ACCESSION   DASRPQ010001569 DASRPQ010000000
VERSION     DASRPQ010001569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2997
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4577595"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1624)
                     /gene="ctaD"
                     /locus_tag="VFD73_17850"
     CDS             complement(<1..1624)
                     /gene="ctaD"
                     /locus_tag="VFD73_17850"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR02891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HZI75848.1"
                     /translation="MTAPAELQPQPPTPYEDQDRVRLELEKTWAQPPGLWNWIRSVDH
                     KSIGKRYIVTAFIFFVLAGLQAATMRAQLSRPENHVLGPDAYNQFFTVHGLTMMFMFA
                     VPIMEAMGLYLVPLMIGARNVAFPRLNNYGYWVYLAGGLFLYIAFFLNTGPDVGWFGY
                     VPLSGPQFSPGKRADVYAQSITFTEIAALVGAVELIVTIFKNRAPGMSLNRMPLYVWA
                     MLVQAFMVLFAMPWVATATQFLAMDRLVATHFFNQAEGGDALLWQHLFWFFGHPEVYI
                     IFIPALGFVSSIVATFTRRPVFGYPVMVLSMVATGFLGFGLWVHHMFATGIPQLGESF
                     FTGASMMIAIPSGIQIFCWIATIWSGRPRFTVPFLFVLGFVVLFIIGGFTGVMLASVP
                     FDQQVHDTFFVVAHFHYVLIGGAVFPLFGAFYYWFPKITGRMLSERLGRWNFWLFFSG
                     MNLTFFPMHQLGLEGMPRRVYTYLPETGWGDLNLLASIGAVIIAISMLIFVINVAASL
                     RNGVLAGDDPWGGETLEWATSSPPRHYNFTHIP"
     gene            complement(1621..2601)
                     /gene="coxB"
                     /locus_tag="VFD73_17855"
     CDS             complement(1621..2601)
                     /gene="coxB"
                     /locus_tag="VFD73_17855"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR02866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HZI75849.1"
                     /translation="MTVAGLVLAVLQQSHSVLNPAGPLTRVIDRLWNAMYLTSAIVFV
                     LVVLALLWGAFRRRTGDAPPRTTEREASLKTGVSIATGLTVVVLFVFLIYDVAVGRQD
                     THNPGPQALQLRVTGHQWWWEVQYRDSIANDWATTANEIHIPVGRPVALELRSTDVIH
                     SFWPPDLSPKRDLIPGNVNSLWFQADSPGVYRGQCAEFCGLQHAKMAFLVIAEPPDSF
                     RNWLVRQRDTAMTPTDELTRRGQEVFLASTCPMCHAISGTPAGSRIGPDLTHLASRKT
                     IAAGTLPNTRGNLAGWIVNPQQIKPGTQMPANQLDPADLQALLAYLETLK"
     gene            complement(2598..>2997)
                     /locus_tag="VFD73_17860"
     CDS             complement(2598..>2997)
                     /locus_tag="VFD73_17860"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HZI75850.1"
                     /translation="GITVVGPYENNAYGVSQGKTLYNQFNCSGCHFQGGGGIGPPLMD
                     ADWIYGSEPQNIFETISEGRPNGMPAFGGKITADQIWQIVAYVRSMSGLLRKDVAPGR
                     DDAMQVRPQEQSTQKAKPVQSAIPPSAEHP"
BASE COUNT          614 a          904 c          970 g          509 t
ORIGIN      
        1 cgggaatgtg agtgaagttg tagtgtcttg gcggcgagct ggtggcccac tcgagcgttt
       61 ctccacccca gggatcgtct cccgccagca ctccgttgcg aagacttgca gccacgttga
      121 tcacgaagat cagcatgctg atcgcgataa tcacagcccc gatgctggcc agcaggttga
      181 gatcgcccca gccggtctcc ggcaggtagg tgtacacccg gcgaggcatt ccctcgagac
      241 ccagctggtg catcgggaag aaggtgaggt tcatcccgct gaagaacagc cagaagttcc
      301 accgtcccag ccgctcactc agcatccggc cggtgatctt ggggaaccag tagtagaacg
      361 cgccgaacag cgggaacacc gctccaccga tcagcacata atggaagtgc gctaccacga
      421 agaaggtgtc gtgcacctgc tgatcgaacg ggaccgatgc gagcatcacc ccggtaaagc
      481 cgccgatgat gaacaacacc acaaagccga gcacgaacag gaatgggacg gtgaacctgg
      541 gtcgcccgga ccagatcgtc gcgatccagc agaagatctg gatcccgctg gggatggcga
      601 tcatcatgct cgcgccggta aagaagctct ctcccagctg cggaatccca gtggcgaaca
      661 tgtggtgcac ccagaggccg aagcccaaaa agccggtcgc caccatggag agcaccatga
      721 cgggatagcc gaacaccggt cgccgggtaa acgtcgccac aatggaggag acgaagccca
      781 gcgccgggat gaagatgatg tagacctcgg gatggccgaa gaaccagaac agatgttgcc
      841 agagcagcgc gtcgccgcct tcggcctggt tgaagaagtg ggtggccacc agccggtcca
      901 ttgccaggaa ctgggttgcc gtcgcgaccc acggcatggc aaacagcacc atgaacgcct
      961 gcaccagcat ggcccacacg tacagcggca tccggttgag gctcatcccc ggcgcccggt
     1021 tcttgaagat ggtaacgatc agctccaccg ctcccaccaa agcggcgatc tcggtgaagg
     1081 tgatcgactg ggcgtagaca tcggcccgtt tgccgggaga gaactgtggt ccggacagcg
     1141 gcacgtaccc gaaccagccc acgtcgggac cggtattgag gaaaaacgct atatagagga
     1201 agagaccgcc cgcgaggtag acccagtagc cgtagttgtt gagccgggga aaggccacgt
     1261 tcctggcacc gatcatgagc ggcaccaggt acagccccat cgcctccatg atcggtaccg
     1321 cgaacatgaa catcatggtg agcccatgga cggtaaagaa ctggttgtac gcgtcggggc
     1381 cgagcacgtg gttctccggc cgggacagct gggcccgcat ggtggctgcc tggaggccgg
     1441 ccagcacgaa gaagatgaac gcggtgacga tgtatcgttt gccgatcgac ttgtgatcaa
     1501 cgcttcggat ccagttccag agaccgggag gttgcgccca ggtcttctcc agctcgagac
     1561 gtactcgatc ctggtcttcg tagggtgtgg gcggctgggg ctgcagttcg gccggggcgg
     1621 tcacttcagc gtctccagat aagccagcag agcttgcaag tctgccggat cgagctggtt
     1681 cgccggcatc tgggtgccgg gtttgatctg ctgcggattc acgatccagc cggccaggtt
     1741 gccgcgagtg ttgggcagcg tgccggcggc gatggtcttg cggctggcca gatgggtgag
     1801 gtcgggcccg atgcggcttc ccgccggtgt cccgctgatg gcgtggcaca tcgggcaggt
     1861 cgaggcgaga aagacttcct ggccccgacg ggtcagctcg tcggtcggcg tcatcgcggt
     1921 atcgcgctgg cgcaccagcc agttcctgaa gctgtcgggc ggctccgcga tcaccaggaa
     1981 agccattttc gcgtgctgca agccgcagaa ctcggcgcat tggccccgat acacacccgg
     2041 tgaatcggcc tggaaccaca ggctgttgac gttgcccgga atcaggtcgc gcttggggct
     2101 gagatcgggt ggccagaagc tgtggattac atcggtggac cgaagctcga gggccacggg
     2161 acggcccacc ggaatgtgga tctcgttcgc ggtggttgcc caatcgttgg cgatcgagtc
     2221 acgatactgc acctcccacc accactgatg gccggtcacg cggagctgca gcgcctgcgg
     2281 acccggattg tgcgtatcct gccggccgac cgcaacgtcg tagataagaa agacaaagag
     2341 cacgaccacg gtgaggccgg tcgcaatact cacccccgtc ttgagcgacg cttcacgctc
     2401 ggtggttcgc ggaggagcgt cgccggttct ccgccggaac gcgccccaga gcagcgccag
     2461 gacgacgagc acgaacacga tcgccgaggt gagatacatc gcgttccaca gccgatcgat
     2521 gacgcgcgtc agcggacccg cggggttgag caccgagtgt gactgctgca gaacagcaag
     2581 cacgagacca gcaacggtca tgggtgttcg gcggagggtg gaatcgcgga ttgaaccggc
     2641 ttggccttct gggtggactg ctcctgagga cgaacctgca tggcatcgtc ccggcctgga
     2701 gcaacgtcct tccgcagcaa tccactcatg gaacggacat acgccacgat ctgccagatc
     2761 tggtcggcgg tgatcttgcc gccgaatgcc ggcatgccat tggggcggcc ttcggagatc
     2821 gtctcgaaga tgttctgcgg ctcactgccg tagatccagt ctgcgtccat caacggtggt
     2881 ccgatcccgc cgccaccctg gaagtggcag ccggagcaat tgaactgatt gtagagagtc
     2941 ttcccttggg acacgccata ggcgttgttc tcgtagggcc cgaccacggt aatcccc
//
LOCUS       DASRPQ010001570         1370 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3946406, whole genome shotgun sequence.
ACCESSION   DASRPQ010001570 DASRPQ010000000
VERSION     DASRPQ010001570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3946406"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            88..729
                     /locus_tag="VFD73_17865"
     CDS             88..729
                     /locus_tag="VFD73_17865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75851.1"
                     /translation="MLALFTLTSCTGSSSRRPQSRPAEATDPPSEWQLDPADTSGTIS
                     SQSSEEALWLRFGKAEVDSARIELGEGETTPGTVIFPHDSLRRAEIVWQDTVRRSHPA
                     RVILRGSASRWRVGSGISLNTSLAELERLNGRPFTLAGFGWDYAGVVTSWNGGALDTT
                     LAGIKLYLDPGPAQYESAPYSQVLGDRDYSSALPAMQQLSPRVRTIFIDFESR"
     gene            729..1241
                     /locus_tag="VFD73_17870"
     CDS             729..1241
                     /locus_tag="VFD73_17870"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HZI75852.1"
                     /translation="METVAALFRLLTQGVYVVGVSDGQQRDAFTAAWIMQASFDPLLL
                     AVSINPDNASYELLHASGWFTVNVLKQDQLDLARHFGTKSGRDRDKLARVRIRPGQAG
                     SPILEDALAYFECALEGRTRAGDHELVLGRVMNGQILDAKAAPLTYAETEDMDGSSAL
                     YPGTFSAGKR"
BASE COUNT          270 a          413 c          442 g          245 t
ORIGIN      
        1 gcttgcggca agagaggagg gcgcctttgt ttgactgccg gcctttccat tcaggagcgc
       61 tgaagcgaga cgagaattgg gctgacggtg ctcgcgctgt ttacgctaac cagctgcact
      121 ggctccagtt cccgcaggcc ccagtcccgg ccggccgagg ccaccgatcc gcccagtgaa
      181 tggcagctgg atccggccga caccagcggc accatttcct cgcagagcag cgaggaagcg
      241 ctgtggctcc gctttggcaa ggccgaagtc gattcggcac ggatcgagct gggcgaggga
      301 gaaaccacgc cgggaacggt catctttccc cacgacagtt tacggcgagc cgagatcgtc
      361 tggcaggaca ccgtccgccg cagccatccg gcgcgggtga ttctgcgcgg aagcgcgagc
      421 cgctggcgcg ttggttccgg aatttccctg aataccagcc tggcggagct ggagcggctc
      481 aacggcagac cattcaccct ggcggggttc ggatgggact acgccggcgt ggtgaccagc
      541 tggaacggcg gcgcactcga cacgacgctg gccggcatca aattgtatct ggatcccgga
      601 ccagcccagt atgagtcggc gccatactcc caggtcctcg gcgatcggga ctactcgtcc
      661 gcgcttccag ccatgcagca actgagtccg cgagtgagaa cgatcttcat tgatttcgag
      721 agtcgctagt ggaaacggtc gcggcgctgt ttcgcctgct gacacaggga gtctacgtcg
      781 tgggggtctc ggatggacag cagcgagacg cgttcaccgc cgcatggatc atgcaagcgt
      841 cgttcgatcc cctgctgctt gccgtcagca tcaatccgga caacgcttcg tacgagctgc
      901 tgcacgccag tggctggttc accgtgaacg tcctcaagca ggaccagttg gatctcgccc
      961 gacacttcgg caccaaatca ggtcgagaca gggacaagct ggcgcgagtc cgtatccgtc
     1021 cagggcaggc gggctctccc attctggagg acgcgctggc gtatttcgaa tgcgcgctgg
     1081 agggacgtac ccgcgcaggg gatcacgagc tggtattggg ccgggtgatg aacgggcaaa
     1141 ttctggatgc taaggccgcc ccgctgacct atgctgagac tgaagacatg gatggcagca
     1201 gtgcgctcta cccgggcact ttttctgcgg gcaagagatg agcggttaca cttaggcggc
     1261 accggacagc gacaaaaagc gtcatggagg caagcatgag caccgtaacg attacccgcc
     1321 ccgcacagga tgagtcggta ggctactatc atcggtacat cgaccaagtc
//
LOCUS       DASRPQ010001571         1269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1117223, whole genome shotgun sequence.
ACCESSION   DASRPQ010001571 DASRPQ010000000
VERSION     DASRPQ010001571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1117223"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..794)
                     /locus_tag="VFD73_17875"
     CDS             complement(<1..794)
                     /locus_tag="VFD73_17875"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZI75853.1"
                     /translation="MVEGRSRPAGSTLESAKSQTQRWHPLLPNLQRVNAAALASGRTR
                     FTALLHHVDVAALERAFQRQRRAASPGVDRVTMDQYEQDLMGNLQRLHARIHSGQYWP
                     KPVLRTYIPKADGGKRPLGLPTLEDKIVQGAVAEVLNAIYEADFLGFSYGFRPARSAH
                     QALAALDRALMTRDVNWVLDIDIRSFFDTVDHGWMMRMLAHRIADRRVLRLIERWLKA
                     GILESGTWQSTEIGTPQGSGISPILANLFLHYVVDLWVHQWRQRHA"
     gene            1080..>1269
                     /locus_tag="VFD73_17880"
     CDS             1080..>1269
                     /locus_tag="VFD73_17880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75854.1"
                     /translation="MQSLCTLQTPRCRDARNTRYRAARYSLTRTGLAPVGSRQLRLAH
                     RVRTPYSYLWSREHGAGAE"
BASE COUNT          204 a          441 c          377 g          247 t
ORIGIN      
        1 ctcgcgtgcc gctgacgcca ctgatggacc cacagatcga cgacgtagtg caggaacaga
       61 ttggcgagga tcgggctgat gccagaccct tgcggtgtcc ctatctcagt cgattgccac
      121 gttccgctct ccaggatgcc tgctttgagc caccgctcga taagacggag aacccgccgg
      181 tcggcgatcc tgtgagccag catccgcatc atccatccgt ggtcaacggt gtcgaaaaag
      241 ctgcggatgt cgatgtcgag cacccagttc acgtcccgcg tcatcagcgc ccggtccagg
      301 gccgccagcg cctgatgggc gctgcgggct gggcggaagc cgtagctgaa ccccaggaag
      361 tctgcctcat agatcgcatt gagcacctcg gccaccgcac cctggacgat cttgtcctca
      421 agcgtcggta ggccgagagg ccgtttgcct ccatcggctt tcgggatgta ggtgcggagc
      481 actggcttgg gccagtactg gccgctgtgg atgcgtgcgt gcaggcgctg aaggtttccc
      541 atcaggtctt gctcgtactg gtccatcgtt acccgatcga ccccagggct cgccgcgcgc
      601 cgctgtcgct gaaacgcccg ttcgagcgcg gcgacatcga cgtgatgcag caaagccgtg
      661 aaccgcgtcc ggcctgaagc caaggccgcc gcgttcacac gctgaaggtt cggcagcaag
      721 gggtgccagc gctgcgtctg gctcttcgcc gattccagcg tactccccgc cggccggctc
      781 cttccctcca ccatgtcgtt tccttccatg gcttcagcgg tactatgagc cggtccgact
      841 tccagccgcg atgcaaccag cttcggttct ccctcgctgg ctgcccccgc cggtgaccat
      901 tccggcggat gcggctggac ctcccaggtt ccgacgcgat ccctttgtac gtgatgtggc
      961 ctcagacccc ggcggagcga tggcgccttg cgatagcggt gccacacata ttgccttcgg
     1021 cgaacacgac ggcctcggcc tccacaacgt cgtcatttcg tggctcaatc ccacacccca
     1081 tgcaatcact gtgtacgctt cagaccccgc gttgccgcga cgcccgcaac actcgttacc
     1141 gggcggctcg ctacagcctt acccggacgg gacttgcacc cgttggatca cgccagcttc
     1201 gcctggcgca ccgtgtccgg accccctatt cgtatttgtg gtctcgggag cacggcgcag
     1261 gcgctgagc
//
LOCUS       DASRPQ010001572         2359 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2726376, whole genome shotgun sequence.
ACCESSION   DASRPQ010001572 DASRPQ010000000
VERSION     DASRPQ010001572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2359)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2359)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2359
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2726376"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..378
                     /locus_tag="VFD73_17885"
     CDS             <1..378
                     /locus_tag="VFD73_17885"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75855.1"
                     /translation="KGAPPIYGYEAKWIWDTPSNPLDIYECPARISESLAEEIRATAL
                     RAYHALECRDWCRVDVRCDAAGRPMVVELNPLPGILPDPRDHSCFPKAAAAAGMSYDD
                     LIRSVADIAWRRISGRSLLAEVA"
     gene            379..1389
                     /locus_tag="VFD73_17890"
     CDS             379..1389
                     /locus_tag="VFD73_17890"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HZI75856.1"
                     /translation="MRVAILFDAGSEEWSPQDVAAVVANVHEVRDVLRRRGHEVELLP
                     IRHGDFRWLSRARRSDLVFNLCEGINGHARFEDLVVGTLELTGIPFTGCRTWPTAICH
                     RKHVANTLLSAAGLPVPAFTLAQDNKTPVDFPLPAIVKPAAEDASVGIDNGAVCTSKR
                     ALKRRLGQMLEQFEEVVVQEYVPGREFNVGFVGKRMLPIAEVRFDTLPDGTWPIVSYA
                     AKWIPESAEYEGTVPVCPAELDSELHDRIARVARRAWEHMTESEGYGRIDMRLNDQGE
                     PYVLEVNPTPDLSSNAGLARMGRAAGWSYDELVMQIVDEALMRSQSHRAAAVLVSGVS
                     AA"
     gene            1386..1877
                     /locus_tag="VFD73_17895"
     CDS             1386..1877
                     /locus_tag="VFD73_17895"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI75857.1"
                     /translation="MSGTLVTPRLRHLTAADRGRIEEITRAVGRFRDDEIVVALEVFD
                     AAVRPIPDSYQVLGAELDSRLVGWICWGPTPCTLGTYDLYWMAVDPEMQGAGIGTGLL
                     QEMERRLKGVARLIVIDTAGRPDYKATRAFYKARGYSPVATVPDFYAPGDDQVVFVKR
                     VSG"
     gene            1891..>2359
                     /locus_tag="VFD73_17900"
     CDS             1891..>2359
                     /locus_tag="VFD73_17900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75858.1"
                     /translation="MAETWQEVLKKNSIASLEALAQRFGAENFPELDRLRQAAENFEF
                     RISPAMVELIKSPGDPIWTQYVPSVAELDVVDGIVDSLNEDADSPVPNITHRYPDRAL
                     FLVSPVCATYCRFCTRRRKVGDPEKIPMSQFESAFQYLERHTEIRDVIMSGGDP"
BASE COUNT          405 a          758 c          762 g          434 t
ORIGIN      
        1 aaaggtgcgc caccgattta cggctacgag gccaagtgga tctgggacac gccgagcaat
       61 ccgctcgaca tctatgagtg tcccgcccgc atctcggaga gtctcgccga ggaaatccgg
      121 gccactgccc tccgggccta ccacgctttg gaatgccgcg actggtgccg cgtcgatgtg
      181 cggtgcgacg ctgccggtcg tccgatggtt gtcgagctca acccgctccc gggcattttg
      241 ccggacccgc gggaccattc ctgcttccct aaggccgccg cggcggccgg catgagctac
      301 gacgatctca tccgctctgt cgccgacatc gcctggcgac ggatcagcgg tcgttcactc
      361 ctggcggagg tggcctaaat gagagtcgcg attctcttcg atgctggtag cgaagagtgg
      421 agtccccaag acgtggcggc ggtggtggcc aacgttcacg aggtgcgcga cgtcctgcgg
      481 cggcggggtc atgaggtcga gctgctcccc atccgtcatg gcgactttcg ctggctctcc
      541 cgcgcccgcc ggtctgatct cgtcttcaat ctctgcgagg ggatcaacgg ccacgcccgg
      601 ttcgaagacc tggtggtcgg gactctcgag ctgactggaa ttccgttcac cggctgccga
      661 acctggccca ccgccatctg ccaccggaag cacgtcgcca acactctcct gtcggccgcc
      721 gggctgcccg tccctgcttt caccctcgcg caggacaaca agactccagt ggacttcccg
      781 ctgcccgcga tcgtcaagcc ggcggccgag gacgccagcg ttgggatcga caacggcgcg
      841 gtgtgcacca gcaaacgagc cttgaagcgg cgcctgggac agatgctgga gcagttcgag
      901 gaggtcgtcg tccaggagta tgtgcccgga cgggagttca acgtgggttt tgtcggcaag
      961 cgaatgctgc cgattgccga ggtgcgattc gacaccctgc ccgacggcac ctggcccatc
     1021 gtgagctatg ccgccaaatg gattccggag agcgcggaat acgagggcac tgtgccagtt
     1081 tgtcccgccg agctcgatag cgagctgcac gaccgcattg cccgggtggc gcgccgggcc
     1141 tgggagcaca tgactgagtc ggaaggatac ggccggatcg acatgcggct gaacgatcag
     1201 ggtgagccgt acgtgctcga ggtcaatcct actcccgacc tctccagcaa cgccggtctt
     1261 gcccggatgg gaagggcggc cggctggagc tacgacgagc tggtcatgca aatcgtcgat
     1321 gaggcgctga tgcggtctca gagccaccgg gccgctgccg ttctcgtcag tggggtgtct
     1381 gccgcttgag cggcaccctc gtcacccctc gtctccgcca cctcacagcc gccgaccggg
     1441 gccgcataga ggaaatcact cgtgcggtgg ggcggttccg cgacgatgag attgtggtgg
     1501 cactcgaagt cttcgacgcc gccgtccgcc cgattcccga ttcctaccag gtgcttggcg
     1561 ctgagctcga ctcccggctg gtagggtgga tatgttgggg acccactccg tgcaccctgg
     1621 gtacctacga tctctactgg atggccgtcg atcccgaaat gcagggcgcc ggcatcggga
     1681 ctgggcttct tcaggagatg gagcgacggc tcaagggagt cgcccggctc atcgtcatcg
     1741 acacggccgg acggcccgat tacaaggcaa cccgcgcctt ctataaggct cggggctatt
     1801 cgccggtcgc caccgtccct gatttctatg caccgggcga tgatcaggtg gtctttgtga
     1861 agcgggtaag cgggtagaac cggaggttcc atggcagaaa cctggcaaga agtcctcaag
     1921 aagaattcca ttgcctcgct cgaggcgctg gcccagaggt tcggggcgga gaatttcccc
     1981 gagctggatc gcctgaggca ggcggcggaa aacttcgagt tccggatctc tcctgccatg
     2041 gtggagctga tcaagtcccc gggcgacccg atctggacgc aatacgtgcc cagcgtggcg
     2101 gagctcgacg tggtagacgg gatcgtggac tcgttgaatg aggacgccga cagcccggtc
     2161 cctaacatca cccatcgcta ccccgatcgg gcgctctttc tggtctcacc ggtctgcgcc
     2221 acctactgcc gcttctgcac ccgccgccgc aaggtgggcg acccggaaaa gatcccgatg
     2281 tcgcagttcg agagcgcctt ccagtacctg gagcgccaca cggagattcg ggacgtcatc
     2341 atgtccggtg gcgatcctc
//
LOCUS       DASRPQ010001573         3207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4578124, whole genome shotgun sequence.
ACCESSION   DASRPQ010001573 DASRPQ010000000
VERSION     DASRPQ010001573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3207
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4578124"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..812
                     /gene="fabG"
                     /locus_tag="VFD73_17905"
     CDS             <1..812
                     /gene="fabG"
                     /locus_tag="VFD73_17905"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HZI75859.1"
                     /translation="RAERQGNDARDSRRGGAISGAVTGTAIDLSGKTAFVTGSTRGIG
                     LAIAQRLHDAGAKVAVVGREVQRAQEVARGFGERGIGVACDVARSDQVESAIAAAEAV
                     LGPVEILVNNAGLTRDNILMRLTDEDWDVVLDANLKGAFHTIRAVIKGMMKRRAGRII
                     NISSIVGLTGNKGQANYASSKAGLIGLTKSVAKEYASRNILVNCIAPGFIETEMTASL
                     PDAARASLLEQIALGRLGRPEDVAGTVLFLASDLASYITGQVLVVDGGMVI"
     gene            843..1082
                     /locus_tag="VFD73_17910"
     CDS             843..1082
                     /locus_tag="VFD73_17910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HZI75860.1"
                     /translation="MSNVEEKVKDIIVEELGVEREKLTSDASFMEDLGADSLDTVELV
                     MAFEKEFDIDIPDEEAEKLRTVGDAMSYLHEKIGK"
     gene            1084..2325
                     /gene="fabF"
                     /locus_tag="VFD73_17915"
     CDS             1084..2325
                     /gene="fabF"
                     /locus_tag="VFD73_17915"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HZI75861.1"
                     /translation="MTRRVVVTGLGLVTPVGNDVDSTWQALLAGRSGAAPITKFDAAK
                     QQVRFACEVKGFDPLQYIDRKEARRYDLFAQFALGAAHQAITQAGLEGKFPAPERTGV
                     VIGSGIGGMQTYEDNCMLYLTKGPDRVSPFFVPMFIPDIAPGLVSIRYGLKGPNFATV
                     SACASSAHAIGESFTMIRNGMAEAMVTGGAEAAITGVSVAAFANMKALSTRNDSPETA
                     SRPFDKDRDGFVLGDGGAMVVLESLEHAERRGARILGEIIGYGLSADAYHITSPAEGG
                     EGAQRAMRDCLADGNIDVKDVGYINAHGTSTPQGDIAETQAVKAVFGEQARHLVFGST
                     KSMTGHLLGGAGALEFIVALLVSNCGVIPPTINQFTPDPECDLDSAPNRKVERRVDIA
                     LSNSFGFGGHNVTLAVRRWEQ"
     gene            2488..>3207
                     /locus_tag="VFD73_17920"
     CDS             2488..>3207
                     /locus_tag="VFD73_17920"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HZI75862.1"
                     /translation="MAAGLDLTRLRDPLLRSVGEKVAAGQRLSRADGLALYATPDLLG
                     LGTLADFANRRSNGERVFFSANQHINPTNVCILRNTCTFCSFARMPREEGAYTRSLEE
                     VFREAEQATGMPTREFHIVGGLHPKLRLSYYTDMIRGLKERHPTVHVKALTAVEIAHL
                     ARIEKISVREVLQAMQEAGLTSLPGGGAEVFSTAVRATIAERKLTGDEWLGVHRVAHQ
                     LGIPTNCTMLYGHVETAEDRIE"
BASE COUNT          628 a          977 c         1032 g          570 t
ORIGIN      
        1 atcgtgccga acgccaaggc aatgacgctc gggacagcag acgaggtgga gcgatttctg
       61 gcgcagtgac aggaaccgcc atcgacttga gcgggaaaac cgcttttgtc accggcagta
      121 cccggggcat cggcctggcc atcgcgcaac ggctgcacga tgcgggagcg aaggtggcgg
      181 tggtggggcg agaggtgcaa cgagcccagg aggtggcccg agggttcggt gagcggggaa
      241 tcggcgtggc ctgcgatgtc gcgcgaagtg atcaggtgga gtctgccatt gccgcggccg
      301 aggcggtgct cggtccggtc gagattctgg tcaacaacgc gggcctgacg cgagacaata
      361 ttctgatgcg gctgaccgat gaggattggg acgtggtgct ggatgccaat ctcaaaggtg
      421 cctttcacac catccgtgca gtcatcaagg gcatgatgaa gcgccgggcg gggcgaatca
      481 tcaatatcag cagcatcgtc ggattgactg gaaacaaagg acaggccaac tacgcgtcca
      541 gcaaggccgg tttgatcggg ctcacgaaat cggtcgccaa ggagtacgcc agccgaaata
      601 ttctggtgaa ctgcattgcc ccgggattca tcgagaccga gatgactgcc tccttgcccg
      661 atgctgcgag agcctcatta ttagagcaga tcgcgttggg ccggttgggt cggcccgagg
      721 atgtcgcagg aaccgtgctg tttctggctt ccgacctggc gagctacatc acgggccagg
      781 tgctggtggt ggacggtgga atggtcatct gagacggact gcaatcttca ctcgaggacg
      841 acatgagcaa cgtggaagag aaggtcaagg atatcattgt cgaagagctc ggcgtcgagc
      901 gcgagaagct gaccagcgac gccagcttca tggaagacct gggcgcagac agtctcgaca
      961 cagtcgagct ggtcatggcc tttgagaagg agttcgacat cgatatcccc gacgaagagg
     1021 cagaaaagct tcgcaccgtc ggcgatgcca tgtcgtatct ccacgaaaag atcggaaagt
     1081 agcttgaccc gtcgtgtcgt agtcaccggc ttgggtctgg tgacgcccgt tggcaacgac
     1141 gtcgactcca cctggcaggc gttgctcgcc ggccgatcgg gcgcagcgcc gatcaccaag
     1201 ttcgatgccg ccaagcagca ggtgcgcttt gcctgcgagg tgaagggctt cgatccgctg
     1261 cagtacatcg accgcaagga agcgcgccgc tacgatctgt tcgcccagtt cgctctgggc
     1321 gccgcccatc aggcgattac tcaggctggg ctggagggaa aattcccggc gccggagcgg
     1381 accggcgtgg tcatcggcag cggtattgga ggcatgcaga cgtacgagga caactgcatg
     1441 ctgtatctga ccaagggtcc ggaccgggtg tctcccttct tcgtccccat gttcatcccg
     1501 gacattgcgc caggcctggt ctctatccgc tatgggctga agggacccaa ctttgccacc
     1561 gtctccgctt gcgcgtcatc ggcacacgcc atcggagagt cattcaccat gatccggaac
     1621 gggatggcgg aagcgatggt gacgggcgga gccgaggcgg caatcaccgg cgtttccgtg
     1681 gcagcgttcg ccaacatgaa ggcgctctcg acccgcaacg actcgccgga aaccgccagc
     1741 cgccccttcg ataaggaccg ggacgggttt gtcctgggtg acggtggcgc aatggtcgtg
     1801 ttggagagcc tggagcatgc cgaacgccgc ggcgcccgga tcctgggcga gatcatcggc
     1861 tacgggctct ccgccgatgc gtatcacatc acctctcccg ccgagggggg tgagggtgcc
     1921 cagcgagcga tgcgggactg cctggccgac ggcaacatcg acgtgaagga cgtgggctac
     1981 atcaacgccc acggcacctc gaccccgcag ggcgacatcg cggagaccca ggcagtcaaa
     2041 gcggtgttcg gggagcaggc ccggcatctg gtattcggct cgaccaagtc gatgactggt
     2101 catctactcg gaggagccgg cgcgctcgag ttcattgtag cgctcctcgt atccaactgc
     2161 ggcgtcatac ctcccacgat caatcaattc acgcccgatc ccgaatgcga cctcgactcc
     2221 gcacccaacc gcaaggttga gcgaagagta gatatcgccc tgtccaactc cttcggcttc
     2281 ggcggccata atgtcaccct cgccgttcga cgctgggagc agtagctacc cctccgccac
     2341 tcccccggtt ttaccccaga ggacacacca ggctccgctt ccggtagagc ccactgtgtc
     2401 ctcggtggca actcttttca ggtggcaggg atggtggtgc agcagttacc tttccgctct
     2461 gattccttcg gcactgcaag gagatacatg gctgctgggc tggacttgac gcgtctccgt
     2521 gatccgcttc tgcgctctgt cggtgagaag gtcgccgccg gccagcggct gagtcgcgcc
     2581 gacggcctgg ccctctatgc cacgccggac ctgctgggtc tcggtaccct ggccgacttc
     2641 gccaaccgcc gctcgaacgg cgagcgggtg ttcttctcgg ccaatcagca catcaatccg
     2701 accaacgtgt gcatcctgcg gaatacctgc accttctgct cgttcgcacg gatgcccaga
     2761 gaagagggcg cctacacccg ctcgctcgag gaggttttcc gggaggccga acaggccacc
     2821 gggatgccga cgcgcgagtt tcacatcgtc ggcggactgc atcccaaact gcgcctgagc
     2881 tactacaccg atatgatccg cgggctcaag gagcgccatc cgacagttca cgtcaaagcg
     2941 ctcaccgcag tggaaatcgc ccacctcgcc cggatcgaga agatctcggt gcgtgaggtg
     3001 ctccaggcca tgcaggaagc gggactgacc agcctacccg ggggcggcgc ggaagtgttc
     3061 agcacggcag tgcgcgcgac cattgcagaa cggaagctca ctggtgacga gtggctcggc
     3121 gtgcaccggg tggcgcacca gctcggcatc ccgaccaact gcaccatgct gtacggtcac
     3181 gtcgagacgg ccgaagaccg aatcgag
//
LOCUS       DASRPQ010001574         3110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_493307, whole genome shotgun sequence.
ACCESSION   DASRPQ010001574 DASRPQ010000000
VERSION     DASRPQ010001574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3110
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_493307"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..194
                     /locus_tag="VFD73_17925"
     CDS             <1..194
                     /locus_tag="VFD73_17925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75863.1"
                     /translation="ALAHAKQFNRGIGDERTDRFVGMYVNQWTVDYGPRGRLAVQTLL
                     DRAYSARLIPEPVKVEFVG"
     gene            415..1479
                     /locus_tag="VFD73_17930"
     CDS             415..1479
                     /locus_tag="VFD73_17930"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HZI75864.1"
                     /translation="MPLTDGPVTLLVVDDEEPIRNALRKFLTQQGYEVVTAAGGEEAL
                     EILQRQRITGMLLDVNMPGITGVELVPQIMEIEPAIALLMLTAVNDATSAALCMQRGA
                     FDYLIKPIDLGHLGRAIHQALRRRHTQLEGQQINQWLKDEVAARVAERRLEQANQERI
                     SVATLEALVNALEAKDPFLRGHSARVADLSAMVAAQIGTSDEQIEAVRTGGRLHDIGK
                     IGIREEILNKQGPLTPEEFEHVKQHVTVGSQILAPLVHLGEVIGFVRSHHERWDGNGY
                     PDRLRGEAIPLGARIIGAVEIYDALTTARPYQDRMPPEHAVERIRDMVGTVIDPEVHR
                     ALESVVSQRQALVFLDDARV"
     gene            1531..>3110
                     /locus_tag="VFD73_17935"
     CDS             1531..>3110
                     /locus_tag="VFD73_17935"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HZI75865.1"
                     /translation="MSGVTPIALVGGLLLGVAVLTVAAWFLYTVYLDRVERRLANRKG
                     LYRELVAELATRDRALLDPTIHQIRTLYDLDAFEAVLEEQARSATERPAWLLEVYDQL
                     GLIDKYIDKLQNARKWRDRAFAAELLGRVGNAKAVPALLQTVQATGTEDADVREIALR
                     ALARIADPGAIDPLVAALENADAWLAPRLADILVRHGALAIEPLIHLLSGTDRNTARA
                     WAANVLGEVRAVEAVPLLLQALEDPSDEVRSKAATALGRLRDRRAVAPLLEHLLSDPA
                     PFVRARVASALAQFGGPEVTERLVRTLGDSAWWVRMRGVEALEQIGPGAEAALLMALD
                     DTDPEIRQRAAVSLERLGIPGQLTVAIEQGGSGSDAARTLSRMVAVGTRELISQLLLH
                     PSDTVRQVVIAGIRDARRRDVSGELTRIVSGDPAGAVRGLALDALRVLRIREAVPAAL
                     AALREEDTTVQVAALRLLAQLGGRDAITAVRSQSGHPVPEVRAAAAEALGSLGGPGVE
                     AEILHLVGDPERSVRRAA"
BASE COUNT          546 a          990 c         1045 g          529 t
ORIGIN      
        1 cggcgctcgc tcatgcaaaa cagttcaacc gcggcatcgg cgacgagcgc accgaccggt
       61 tcgtgggaat gtacgtgaac cagtggacgg tggactacgg gcctcgcggc cgcctggcgg
      121 tccagaccct gctcgaccgg gcgtactcgg cgcggctgat cccggaaccg gtgaaggtgg
      181 agtttgtggg ctagcagtcg tcagacgtca gtcgtcagtc ctcagtcgtc agctctcagc
      241 cgcttccgga ttgaactgct gctgccgagc cactggctac tgacgcctga cgcctgacgc
      301 ctgacccaat acccaaccgc cgcaccattg actaccttct caagaccctg atccaatttc
      361 attgcacctc gagtggcagc caccagtagg gctgacccaa gaggaggagt ctgcgtgccc
      421 ctgaccgatg ggcccgtcac cctgctggtc gtcgatgacg aggagccgat ccgcaacgcg
      481 ctccgcaagt tcctgacgca gcaggggtat gaggtggtta ccgcggctgg cggcgaggag
      541 gcgctggaga ttctgcagcg ccagcggatc accggaatgc tcctggacgt gaacatgccc
      601 gggattaccg gagtcgagct ggttccgcag attatggaga tcgagcctgc gatcgcgctg
      661 ctgatgctga ccgcggtgaa cgatgcaacc agtgcagctc tttgcatgca gcggggtgca
      721 ttcgattacc tgatcaagcc aatcgatctg ggccacctgg gtcgggccat ccaccaggcc
      781 ctccggcggc gccacacgca gctggaaggc cagcagatca atcaatggct caaggatgag
      841 gtcgcggcca gggtggcaga acggaggctg gagcaggcca atcaggagcg gatctcggtc
      901 gctactctgg aggccctggt gaacgccctg gaggccaagg acccgtttct gcggggtcac
      961 tccgcccgag tcgccgatct gtcagcaatg gttgcggctc agatcgggac cagcgacgag
     1021 cagatcgaag cggtgcgtac cggaggccgg ctccacgaca tcgggaaaat cggaattcgg
     1081 gaagagatcc tgaacaagca gggacccctc accccggaag aattcgagca cgtgaagcag
     1141 cacgtgaccg tgggatccca gattctggct cccctggtgc atctgggcga agtcatcggc
     1201 ttcgtccgca gtcatcacga gcggtgggac gggaacggat acccggaccg gttgcgcggc
     1261 gaagcgatcc cactgggagc cagaatcatt ggagctgtcg agatctacga tgcccttacg
     1321 accgcacgcc cctaccagga tcgcatgccg ccggagcacg cggtggagcg cattcgcgat
     1381 atggtcggca cggtcatcga tcccgaggtg catcgggccc tcgaaagtgt cgtctcccag
     1441 cgacaggcac tcgtctttct cgacgacgct cgcgtctgat cctcaccgga tggcacccgt
     1501 gctgccggcc atcggcactt cggtcgctct atgagcggcg tgacgccgat tgccctcgtg
     1561 ggcggtctcc tgttaggcgt cgccgtcctg acggttgccg cgtggtttct ctacaccgtc
     1621 tacctcgata gggtcgagcg ccgcctcgcc aaccggaagg gtctgtatcg cgagctggtt
     1681 gccgagctcg ccacccgaga ccgggcactg ctcgatccca ccattcacca gatacggacg
     1741 ctgtacgacc tggatgcctt cgaggcagtg ctcgaagagc aggcgcgcag cgcgaccgaa
     1801 cgcccggcct ggctgctcga ggtgtatgat cagctcgggc tgatcgataa gtacatcgac
     1861 aagctgcaga acgcccggaa atggcgcgac cgggcgtttg ccgcggagct gctgggacgg
     1921 gttgggaatg ccaaggcggt ccccgccttg ctccagacgg tgcaggccac cgggaccgaa
     1981 gacgccgatg ttcgtgagat cgctctgcgg gcgctcgctc ggattgccga tcccggcgcg
     2041 atcgacccgc tcgtggctgc cctggagaac gccgatgcct ggctggcgcc ccgcctcgcg
     2101 gacattctcg tccgccatgg cgcgctcgcc atcgaaccac tgattcatct cctgagtggc
     2161 accgaccgaa ataccgctcg cgcctgggcc gccaacgtcc tgggcgaggt ccgggccgtt
     2221 gaggccgttc ccctgctgct ccaagcattg gaagacccga gtgacgaggt ccggagcaag
     2281 gccgcgaccg cgctcggccg gctcagggat cgaagggcgg tcgcaccgct tctggagcac
     2341 ctgctcagcg atcccgctcc cttcgttcgg gcgcgcgtgg cttcagcgct ggcacagttc
     2401 ggcgggcccg aagtgacgga gcgcctggtg cgcactctgg gtgattcagc gtggtgggta
     2461 cgaatgcggg gagtggaggc gctggagcag atcggcccag gggcggaagc ggcgctcctc
     2521 atggcgttgg atgacaccga tccggaaatc cggcagcggg cagcggtgtc gctggaacgg
     2581 cttggtatac cgggccaact gaccgtcgcc atcgagcagg gcggctcagg cagcgacgcg
     2641 gctcgcacgc tctcccgaat ggttgcggtc gggacccgcg aactcatcag ccaactcctg
     2701 cttcacccgt ccgacaccgt gcgccaggtc gtcattgccg gaatccgcga cgctcgccgg
     2761 cgcgacgtgt ccggggaatt gacccgaatt gtatccggcg atcctgcagg ggcggtgcgg
     2821 ggcctcgctt tggacgcact gcgcgtccta cgaataaggg aagcggtacc ggcagcgctc
     2881 gcagctctcc gggaggagga taccaccgtc caggtggcag ctctgcggct tctggcacag
     2941 ctgggaggac gcgatgcgat tacggcagta cgctcccaga gcggtcatcc agtgccggag
     3001 gttcgtgccg cggcggcgga ggctctcggc agtttgggag gtcccggggt agaagcggaa
     3061 atcctgcatc tcgtgggaga cccggagagg tcggtccgcc gggcagcatt
//
LOCUS       DASRPQ010001575         1415 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2371808, whole genome shotgun sequence.
ACCESSION   DASRPQ010001575 DASRPQ010000000
VERSION     DASRPQ010001575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1415
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2371808"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1157
                     /locus_tag="VFD73_17940"
     CDS             <1..1157
                     /locus_tag="VFD73_17940"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HZI75866.1"
                     /translation="PRSGGVFAYILEAFGPLPAFLFGWSELTVIRASALGAIATIFAE
                     YLGHFIALSPMQVRWVAAAAVLLVGSLNYVGVKRAALLMNLATMAKYAALAALVLLAF
                     TAGQGDTGHFTPAWSGGVNLSLIATALIAIMWTYDGWADLSFMGGEVKNPGKTLPMAL
                     IVGTLGILLIYLLLNVAYVYLVPLSEMARSPLIAATAAERIPILGAAAGGVISAVVMV
                     SCFSTLIGSMMTGPRIFFAMADRGLFFQTIARVSPRFQSPSVAIWLATGLGVVYVLLN
                     DFQQLADKFILGIWPFYALAVAAVFVLRRTRPDLERPYRTWGYPLVPLLFPLASVGMV
                     VNALVTDPINTGITFGIILAGVPAYLAWRTWRPPLLEPIGKKELAAEYKR"
     gene            complement(1154..>1415)
                     /locus_tag="VFD73_17945"
     CDS             complement(1154..>1415)
                     /locus_tag="VFD73_17945"
                     /inference="COORDINATES: protein motif:HMM:NF013857.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75867.1"
                     /translation="EQLELACQAGATRLLIDNQSPETLAAWAALAQQRSPGIEIEASG
                     GIVLDTARAYAAAGADFISIGALTHSVRAADVALEVRLEANS"
BASE COUNT          215 a          438 c          455 g          307 t
ORIGIN      
        1 tcccccggtc cggcggagtg ttcgcctaca tcctggaagc gtttggcccg cttccggctt
       61 tcctgtttgg ctggtccgag ctgacggtca tccgggcgtc tgcgctcggt gcaattgcca
      121 ccatctttgc cgaatacctg gggcacttta tcgcgctcag cccgatgcag gtgaggtggg
      181 tggcggcggc cgcggtgctc ctggtggggt cactgaacta cgtcggagtg aagcgggcgg
      241 cgctgctgat gaacctggcc acgatggcaa agtacgcggc acttgcggcg ctggtgctcc
      301 tggccttcac cgcgggccag ggcgacaccg gtcattttac accggcctgg agcggaggag
      361 tcaacctctc gctgattgcg acggcgttga tcgccatcat gtggacctat gatgggtggg
      421 ccgatctctc ctttatggga ggagaggtaa aaaatccagg caagaccctg cctatggccc
      481 tcatcgtggg tacactcggc attctattga tctatctgct gctgaacgtg gcctacgtct
      541 atctggttcc gctctcggag atggcccggt caccactcat cgcggccacg gccgcggagc
      601 gcatcccgat cctgggagct gcggccggcg gagtcatctc cgcggtggtc atggtgtcct
      661 gcttcagcac cctcatcggc tcgatgatga ccggtccgcg gatctttttc gccatggctg
      721 atcgaggctt gttctttcaa accattgccc gggtgtctcc ccggttccag agtccgtcgg
      781 ttgcgatctg gctggcaaca ggattgggcg tggtctacgt gctgctgaac gatttccagc
      841 agctcgccga caagttcatc ctcggcatct ggccgttcta tgcgctggcc gtcgcagcgg
      901 tcttcgtgct ccgacggacc cggcccgacc tcgagcggcc gtatcgcact tggggctacc
      961 cgctggtgcc gctgcttttc ccgctggcat cggttgggat ggtggtcaat gcgctggtga
     1021 ccgatccgat caacaccggc atcaccttcg ggataattct ggcaggagtt cccgcgtatc
     1081 tcgcctggcg gacgtggcgg ccaccgttgc tcgagccgat aggcaagaag gagctcgccg
     1141 cggagtacaa gcgctaagag ttcgcctcca gtctgacttc gagcgcgaca tcggcagctc
     1201 gcacactatg cgtcagcgcg ccgatggaga tgaaatcggc tccggccgct gcgtaggctc
     1261 gagccgtgtc caatacgatg ccgccgctcg cctcgatctc gatgccagga gatcgttgct
     1321 gtgccagagc cgcccaggcg gcaagggtct cgggtgactg gttgtcgatg aggagccgag
     1381 tcgctccagc ctggcaggcc agctcgagct gttcg
//
LOCUS       DASRPQ010001576         1422 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3656537, whole genome shotgun sequence.
ACCESSION   DASRPQ010001576 DASRPQ010000000
VERSION     DASRPQ010001576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1422
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3656537"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..294
                     /locus_tag="VFD73_17950"
     CDS             <1..294
                     /locus_tag="VFD73_17950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75868.1"
                     /translation="CLLTYFTVGLLSAGRAGMRVGVGAAAIVGFLDSTLGPLAAWFVG
                     PGPVTQTIEEPGIFAYGITVVTLTAAATGFLGAGIGLWIERRRGLRGSRVLPH"
     gene            369..>1422
                     /locus_tag="VFD73_17955"
     CDS             369..>1422
                     /locus_tag="VFD73_17955"
                     /inference="COORDINATES: protein motif:HMM:NF014851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75869.1"
                     /translation="MIRQQTILDGEWEFFPDPQQVLTIDALRSENARTIRVPGPWQAQ
                     FEDLRDYSGVAWYRKVFDQAVSRSGRQAIAPATAGIQSNGQPPARPTTYILHFGAVDY
                     FATVWLNGRQIGEHEGGYLPFELDVTDALRDSGPNELVVRVIDPGNDADFLPEFTFAE
                     IPHGKQSWYGPIGGIWQSVYLEQRTATHLCRLRVTPDVPGEQVRVDVALNRPADGPVG
                     LWLNVTDPRGQVRRHRFVLATGREGDTLSIPVPEPMLWDTTVPNLYELQAVLLDGTDD
                     RAEVLDQLGTRFGMRTIATSSTGHLLLNGRVLYLRGALDQDYYPDLIYTPFGDAELEE
                     QFRKAKHMGLNCLRTHI"
BASE COUNT          244 a          474 c          430 g          274 t
ORIGIN      
        1 tgcctgttga cgtatttcac tgtcggcctg ctttcagccg gccgcgccgg catgagagtc
       61 ggggtgggcg ccgcagcgat cgtgggtttt ctcgacagca cgctgggtcc gctcgcggcc
      121 tggttcgtcg gacccggtcc agtgacccag accatcgagg agcccggcat cttcgcctat
      181 ggcatcaccg tcgttaccct gaccgccgcg gccacggggt ttctcggtgc ggggatcggc
      241 ctctggattg aacggcgccg cggacttcgc ggctcccgag tcctccccca ctgatccttg
      301 caaatccccc cagccccttc tctcttacaa gccggacctt ctcttccgta ccattcggag
      361 cctgagtcgt gattcgacag caaaccatcc tcgatggtga gtgggagttt tttccggatc
      421 cgcaacaagt cctgacaatc gatgctctcc gctccgagaa cgcgcggacc attcgggtcc
      481 ctggcccctg gcaggcgcag tttgaggact tacgggacta cagcggggtg gcgtggtatc
      541 ggaaggtctt cgaccaggcg gtaagccggt caggccgtca ggcgatcgct cctgccactg
      601 cgggtattca gtcgaatggg caaccgcccg cccgcccgac cacctacatc ctccacttcg
      661 gcgcggtgga ctacttcgct accgtctggc tcaacggacg gcagatcggc gagcacgaag
      721 gcggctactt gccgttcgag ctggatgtta ccgatgcgct ccgagacagc ggacccaatg
      781 aactggtagt ccgcgtcatc gaccccggca acgatgccga cttccttccc gaattcacct
      841 ttgccgagat cccccacggc aaacagagct ggtacgggcc gatcggcggc atctggcaga
      901 gtgtctatct cgagcagcgc accgctaccc acctgtgccg actgcgggtg actcccgacg
      961 ttccgggaga gcaggtccgg gtggatgtcg cgctcaatcg tcccgccgac ggtcccgtcg
     1021 ggctctggct gaatgtgacc gatcctcgag gccaggttcg gaggcaccga tttgtgctgg
     1081 ccaccgggag agagggagac accctgagca ttccggtgcc cgagccgatg ctctgggaca
     1141 ccacagtccc caatctttat gaactgcagg ccgtgcttct cgacggcacc gatgatcggg
     1201 ccgaagtcct cgaccagctc ggcacccggt tcgggatgcg gacgatcgcg acctcctcca
     1261 ccgggcatct gctgctgaac ggacgagtgc tctatctgcg aggcgcgctg gaccaggact
     1321 actatccgga cctgatctac actccatttg gggacgcgga gctggaggag cagttccgga
     1381 aggcaaagca catgggtctc aactgccttc gcacccacat ca
//
LOCUS       DASRPQ010001577         1646 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3947445, whole genome shotgun sequence.
ACCESSION   DASRPQ010001577 DASRPQ010000000
VERSION     DASRPQ010001577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3947445"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(457..1368)
                     /locus_tag="VFD73_17960"
                     /pseudo
     CDS             complement(457..1368)
                     /locus_tag="VFD73_17960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611897.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            1463..>1646
                     /locus_tag="VFD73_17965"
     CDS             1463..>1646
                     /locus_tag="VFD73_17965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75870.1"
                     /translation="MPVVSSSKGSLPPAAVVSFMMSFTPQSPCFLGNLSNKDRWTFPD
                     RANLGHLPFNKSLAYEL"
BASE COUNT          293 a          484 c          546 g          323 t
ORIGIN      
        1 gatctgcggc ggcaatgatg gcgacgaggg agaggagggg ccacggtagg tggtggtttt
       61 ggagatatgg gaagatgtca agttcagggc tccttgtata tcaggccgca tcgccgcggc
      121 cattgtcggg caagcagaca accgtgcccg tgcgagccag tatatcacac atggcttcat
      181 cgtgcggatt gccgggccga tagatgaata cggacccacc gaaggcttcc ccaggtgtcc
      241 caggttccaa cgctgaccca ctatatatag tgttcagtcg gattccggcc cttcgaggag
      301 atgttcttgc atagcatgtt tccgtgcccc gtcctgccgc ataccgtcgg cagccttccg
      361 tcggcgcggc aactgtcgct tcggcgggtt ggcgcggttc tgccgtggct tgcggccgat
      421 cacagcggcg tagccgtgcg gctggtggtc gaccgccaga ccgaggatgc gctcgaagga
      481 tacgcgccgc cagtaacggc gattgaagcg gaacgcgtac tcctccaggt agcggtcgag
      541 gtgcttggcg cggaagccgt ggaaggtgcc catgccccag cgcttcatca gggcgaagac
      601 gcggtgaacc cagaacagga cgaggtgggc ggccattttg ccgacgaccc gctggtcgag
      661 gacgtagcgc tcggcctccg gcccctcgtt gagtccgaga caggagctgt gcccatcggt
      721 cagcagcgtc gtgccaggcg cgatgttctc ccgcacgaag gcatggatgg atggctgcag
      781 ttcgtcaggg atgacgacca gacggatgcg gcgcgggcga gtattgcggc aggttcggtt
      841 gaagttggtt tccggcggct ctcccgtggt ctggtcaacg atttcgacgg cgccgatgat
      901 cgtgacgtgc ccctccggca ctcccgcgct gtcgtcggtg cggaagggga tctcggtttg
      961 gtcgatttcg accaggccat gcagcggctg ccgctcgcgg tcggtcatcg ccacccggaa
     1021 cttgtggagc agcagccagg cggtgtcctc cttgacgccg atctgattcg ccaactggag
     1081 agccgagata ccgtttgagt gggtggcgat cagatgcgct gcccagaacc aggtggtcag
     1141 cggcagcttg gtccggtgga gaatggtccc ggccgtgacc gatgtctggc gtccgcagcc
     1201 caagcattcg aagctgtagg cccgcgagcg caggcgggca gcgcgacagc ccccgcaagt
     1261 cgggcagata aagccggccg gccagcgata ccggatgaga aactcggcgc aggcggcctc
     1321 gtcggggaat tcggtttgga actgggccag cgaacggggt cgggtcatgc caccagcata
     1381 ctacctccgg ttcggaagtg cgaatctaca tatggtaggc cagagtgctt acctgggaca
     1441 cctggggaag ccttccgcga ccatgccggt cgtctcctcc agcaagggct cgcttccccc
     1501 agcagctgtt gtgtccttca tgatgtcgtt cacccctcaa tccccctgtt ttctcgggaa
     1561 cctgtcgaat aaggaccgat ggacctttcc tgatcgtgct aatttaggcc acctgccctt
     1621 caataaaagc cttgcgtatg aattat
//
LOCUS       DASRPQ010001578         1224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2998772, whole genome shotgun sequence.
ACCESSION   DASRPQ010001578 DASRPQ010000000
VERSION     DASRPQ010001578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2998772"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..997
                     /locus_tag="VFD73_17970"
     CDS             <1..997
                     /locus_tag="VFD73_17970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75871.1"
                     /translation="GAIVADVPVGTNLGLFWLLWALISGRFLLSRGAVFPALADGGLP
                     ADAVRRSGAALAYGRWAIETLVRAWHQVVQQEGCWQAHRYEGFRPVACDLVGFFRPRL
                     SGCIGKHYQSGADKALPAIVLAVVAAVGAIGKVRFPLMRLLLRADPDDPSEAALQRRA
                     LTQAGAVLQPDEVLVVDAGFGVAALLTAGVPRFVARVARNFTARRNVLAASQGRGRRP
                     VYGARVRPLSRTHKGKIITATAPDATAQWVTGKRIIQAQVWDNLVLSTSKPGGPAFRC
                     VVIHDPRYQEPLVLVTTLPVSASALWCLYRDRWPIEQLPAFCAMKGAMPRGLNML"
BASE COUNT          200 a          389 c          392 g          243 t
ORIGIN      
        1 gggtgcgata gtggccgacg ttcccgtcgg cacgaatctg ggtctgttct ggctgctctg
       61 ggcgctgatc tctggtcgat tcctgctcag tcgaggtgcc gtcttcccgg cgctggccga
      121 tggtggactg cccgcagatg ccgtgcgccg ctctggagcg gctctggcgt atggacgctg
      181 ggccatcgag accctcgtgc gggcgtggca ccaagtggtc cagcaggaag gctgctggca
      241 ggcccatcgg tatgaagggt tccgtccggt ggcctgtgac ttggtcggct tcttccgccc
      301 gcggctcagt gggtgtatcg ggaagcacta ccagtccggg gccgataaag ccctgccagc
      361 catcgtcttg gctgtggttg ccgccgtcgg tgctatcggc aaagtacgct tcccactgat
      421 gcgcctcctc ctacgggccg acccggacga cccgagtgaa gccgcactgc aacgccgagc
      481 cttaacgcag gcgggagcgg tcttgcaacc tgatgaagtg ctcgtcgtcg acgccgggtt
      541 cggcgtggcc gccctgctga cggcgggggt tccccgcttt gtggcgcggg tcgcccgcaa
      601 tttcacggcc aggcggaatg tcctggcggc ctcacaaggc cggggacgtc gccccgtcta
      661 tggggcacgg gtccggccgt tgtcccgcac ccacaaaggg aaaatcatca ccgccacggc
      721 tcccgatgcc accgcgcagt gggtgacagg caaaaggatc atccaggccc aggtctggga
      781 caacctggtg ctgtccacca gcaagccggg aggcccggcc tttcggtgtg tagtcatcca
      841 tgatccacgc tatcaggaac cgctggtgtt ggtgacgacc ctcccggtgt ccgcctctgc
      901 gctctggtgt ctgtaccgcg accgctggcc catcgagcag ctgccagctt tttgcgcaat
      961 gaagggggct atgcctcggg ggctcaacat gctctaacgt gcactcctgc aaggggtata
     1021 ttctctctca aagggtccat aagagaaagt atccccttgc tgaaaggagt gcatcatgca
     1081 caaacatacg acgatgacca ccggacgtgc cagcctgtgt gccttaggcg agtatctgcg
     1141 gcggcactgc ttctttgccc ccctatggga acaggtgcag atcccccaaa cgagtgtccg
     1201 ctatcgcccc atcgagaagg tctt
//
LOCUS       DASRPQ010001579         1484 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3352716, whole genome shotgun sequence.
ACCESSION   DASRPQ010001579 DASRPQ010000000
VERSION     DASRPQ010001579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1484
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3352716"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1305
                     /gene="ettA"
                     /locus_tag="VFD73_17975"
     CDS             <1..1305
                     /gene="ettA"
                     /locus_tag="VFD73_17975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HZI75872.1"
                     /translation="LEKQGNLQERIDALGLWELDHKIDLAMDALRLPPGDADVSKISG
                     GEKRRVALCRLLLEQPDMLLLDEPTNHLDAESVWWLERYLAEFRGTVVAVTHDRYFLD
                     NVAGWILELYKGAGIPWEGNYSSWLQQKEQRLAQEEKQASARQKTLQRELEWIRMSPR
                     ARQAKSKARITAYEELREAGERQQEGTAEILIPVPARLGDEVVIAEDLSKGFGDRLLF
                     ENLSFSLPRGGIVGVIGPNGAGKTTLFRMITGQEQPDSGTLRVGSTVEIAYVDQTRES
                     LDPEKTVYQEISGGQDQLQFGKRSVNARAYAAGFNFRGADQQKKVGTLSGGERNRLHL
                     AKLLKSGGNLLLLDEPTNDLDVDTLRALEDALLSFAGCAVVISHDRWFLDRIATHILA
                     FEGNSEVVWYEGNYQDYAADYHKRKGTSVDQPHRIRYKKLVH"
BASE COUNT          305 a          448 c          492 g          239 t
ORIGIN      
        1 ctggagaagc agggaaatct gcaggagcgg atcgacgcac tggggctttg ggagttggat
       61 cacaaaatcg atctcgccat ggacgcgctc cggcttccgc cgggagacgc ggacgtgtcc
      121 aagatctccg gcggggaaaa acgcagggta gccctgtgcc ggttgctcct ggagcaaccc
      181 gacatgctcc tgctggacga gccgacgaac catctcgacg ccgagagtgt ctggtggctg
      241 gaacgctacc tcgcagagtt tcgcggcacc gtggtcgcag tgacccacga ccggtatttc
      301 ctggataacg tggccggatg gattctggag ctgtacaagg gagccgggat cccctgggag
      361 ggcaactact cctcgtggct gcagcaaaag gaacagcgcc tggcccagga ggagaaacag
      421 gcctcggctc ggcagaagac gttgcaacga gagctggagt ggatccggat gtcgccccga
      481 gctcggcagg ccaagagcaa ggcgcggatc accgcttatg aggagctgcg cgaagcaggt
      541 gagcggcagc aggaaggcac cgccgagatc ctgatcccgg tgccggcccg attgggtgat
      601 gaggtggtca tcgcggagga tctcagcaag ggattcggcg accggctcct gttcgagaac
      661 ctcagcttct cactgccgcg cggcgggatc gtgggggtta tcggtcccaa tggagcaggc
      721 aagacaacgc tcttccgcat gatcaccggc caggagcagc cggacagcgg cacactgcgg
      781 gtcggctcca cggtcgagat cgcgtatgtc gaccagaccc gggagtcgct ggatccggaa
      841 aagaccgtct accaggagat ctcgggcggg caggaccagc ttcagttcgg gaagcggagc
      901 gtaaacgccc gcgcctatgc tgccgggttc aacttccgtg gtgccgacca gcagaagaag
      961 gtcggcaccc tttctggagg cgagcggaac cggctgcatc tcgccaagct cttgaagagc
     1021 ggtgggaacc tcctgctgtt ggacgagccg accaacgatc tcgacgtgga taccctgcga
     1081 gcactggagg acgcgcttct cagtttcgcc ggctgcgcgg tcgtgatcag ccacgaccgc
     1141 tggttcctgg atcgcatcgc aacccacatc ctggcgttcg agggcaacag tgaggtggtg
     1201 tggtacgagg gcaactacca ggactacgcc gccgactatc acaagcggaa aggcacctcg
     1261 gtcgaccagc cgcaccggat tcggtacaag aagctggttc actaagaagc ggggcagcgg
     1321 ggcggcgggg cggcgggcag cggaaatgtc atcgcactgc ccgctccttc agcaagcgac
     1381 gagatccgcc gattctcgat tccgaattcg tcacatatac ccgaacgctg ccccgctgcc
     1441 ccactgcccc gctataattg gccatgctta ccccgcaaac ccgc
//
LOCUS       DASRPQ010001580         1220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2727447, whole genome shotgun sequence.
ACCESSION   DASRPQ010001580 DASRPQ010000000
VERSION     DASRPQ010001580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2727447"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..659
                     /locus_tag="VFD73_17980"
     CDS             <1..659
                     /locus_tag="VFD73_17980"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HZI75873.1"
                     /translation="ARQHGAMTFVDGVHYVPHHLTDVRALGCDFLACSAYKFCGPHIG
                     VLFAREEILQQLDVPKLAPAPNTAPERIETGTLNHEGIVGAAAAVDFLASLSQGSTRR
                     DRLVQTYQELHVRGRALLERLWFGLQEIRGVALYGPAPDLPRTPTVAFTLAGQPADAV
                     AHRLAGLGLFVSSGDFYATTVVERLGVTEGLVRVGCACYTSEEEVERLVQGVRSLSRG
                     "
     gene            complement(665..>1220)
                     /locus_tag="VFD73_17985"
     CDS             complement(665..>1220)
                     /locus_tag="VFD73_17985"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HZI75874.1"
                     /translation="LPGKSVPVLNAGIAADTSCPHRNVPLAGRKSPLDSLSFKVADQT
                     VKVCYGRPSSRGRVMLGGSAVPYGKIWRTGANEPTIFYAPLPLKVAGISIGPGVYSLY
                     TVPGRGEWQIIVNRSISQWGKEDQYTDDIKAQEVGRAKVKTENVSQPIETFTIRAEPG
                     GNNAALVLEWEKTRLRIPFQAQKG"
BASE COUNT          205 a          383 c          378 g          254 t
ORIGIN      
        1 tggcacgtca gcacggagcc atgaccttcg tggacggggt gcactacgtg ccgcatcacc
       61 tcaccgacgt gcgggccctc gggtgtgatt tcctcgcctg ctcggcatac aagttctgcg
      121 gtccccatat cggggtgctc tttgcgcggg aagaaattct gcaacagctc gatgtgccca
      181 agctcgcacc ggcaccgaac acggcgcccg agcggatcga gactggaacg ctgaaccacg
      241 agggaatcgt tggtgcagcc gcggccgtgg acttccttgc ctctctcagc caaggaagca
      301 cccggcgaga ccgactggtg cagacctatc aggaactcca tgtgcgcggg cgcgctctgc
      361 tcgagcgtct ctggttcggt ctccaggaga ttcggggtgt ggcgctctac gggcctgctc
      421 ctgacctccc tcgcaccccg accgttgcct ttacgctggc agggcagccg gccgatgcgg
      481 tggcgcatcg gctggctggt ctaggcctct ttgtttccag tggggacttc tacgccacga
      541 cagtggtcga gcggctgggt gtaaccgaag ggctggtgcg cgtcggatgc gcctgctaca
      601 cctccgagga ggaagtcgaa cgcctcgttc agggagttcg ctcgctcagt cggggctaac
      661 aagctcatcc tttctgcgcc tggaagggga tgcggagccg ggtcttctcc cattccagca
      721 ccaaggctgc attgttgccg ccgggctcgg ctctgatggt gaacgtttcg atgggctgtg
      781 aaacgttctc ggtcttgacc ttggcccggc cgacctcctg cgcctttata tcatcggtgt
      841 actgatcttc cttgccccat tgggaaatcg agcggttcac gatgatctgc cattcgccgc
      901 gaccgggtac ggtgtacagc gagtacacgc cgggacctat gcttatcccc gcgactttga
      961 gcggcaacgg agcatagaag atcgtcggct cattggctcc cgtccgccat atcttcccgt
     1021 agggaacggc gcttccaccg agcatgactc gccctctgga cgaaggcctg ccatagcaaa
     1081 ccttcaccgt ctgatccgcc actttgaagc tgagcgagtc gagggggctt ttccgtcccg
     1141 ccagaggaac attgcggtgc ggacaggagg tatctgcggc aatccccgca ttcagcacgg
     1201 ggacgctctt tccgggaaga
//
LOCUS       DASRPQ010001581         1212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4579008, whole genome shotgun sequence.
ACCESSION   DASRPQ010001581 DASRPQ010000000
VERSION     DASRPQ010001581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1212
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4579008"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..729)
                     /gene="larB"
                     /locus_tag="VFD73_17990"
     CDS             complement(<1..729)
                     /gene="larB"
                     /locus_tag="VFD73_17990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018281842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarB"
                     /protein_id="HZI75875.1"
                     /translation="MTPEQLEALLAEVAAGRLLPRAAVERLRHLPFEDLSFARVDHHR
                     ALRLGHPEVVFCQGKTPEQVVAICERLEAASGGFLGTRASAEVAQLLQSRFPDLIWNS
                     LARTVHLPAPSRGTSARKTGTILVVSAGTSDLPVAEEAAVVGEALGHPVERLVDVGVA
                     GLHRLLASADQLRQARVVIVVAGMEGALPSVVGGLVATPVIAVPTSVGYGASFGGLAA
                     LLGMLNSCASGVTVVNIDNGFGAAV"
     gene            complement(726..>1212)
                     /locus_tag="VFD73_17995"
     CDS             complement(726..>1212)
                     /locus_tag="VFD73_17995"
                     /inference="COORDINATES: protein motif:HMM:NF013380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HZI75876.1"
                     /translation="AFTLHARTRTQMFSGKANWDEIAKVVEALDIPVIGNGDIESGDD
                     IVRMRDHTGCAGVMVGRGAFGNPWLFRDGRALLSGHAAPSSPSAAERFTVALQHAKLA
                     IRLQGDTRRTVLEFRKHLGWYTRGLHGSSALRQRLFQIESVGEAEAIFLEYLEPVAQV
                     A"
BASE COUNT          237 a          408 c          380 g          187 t
ORIGIN      
        1 tacggctgca ccgaaaccgt tgtcaatgtt cacgaccgtc acccccgatg cgcaggagtt
       61 cagcattccc aacagcgccg ccagcccgcc gaaagaggcg ccatagccaa cactggtcgg
      121 tactgcgatg accggagttg ccaccaagcc accgaccacg ctcggcagag caccctccat
      181 tccggcaacg acgatgacca ctctagcctg tcgcagctga tcggcggagg cgagcagccg
      241 gtgcagccca gccacgccga catcgaccag gcgctctacc ggatgaccca atgcctctcc
      301 cacgacggca gcttcttcgg cgaccgggag atcactggtg cccgccgaga ccaccagaat
      361 cgttccggtt tttcgggcag acgtgcctcg ggatggcgca ggcagatgaa cggttcgggc
      421 cagcgaattc cagatcagat ccgggaagcg tgactggagc agctgggcca cctcagcgct
      481 ggctcgagtt cccagaaaac caccgctggc tgcctccagc cgctcacaga tcgcgaccac
      541 ctgttcggga gtctttccct ggcagaagac gacctccggg tggcccaatc gcagcgcgcg
      601 gtggtggtcc acccgtgcga acgagaggtc ttcgaagggg agatgccgca atcgttcaac
      661 tgcggcgcgg gggagaaggc ggcccgcagc cacctcggcg aggagcgctt cgagctgctc
      721 cggggtcacg ccacctgcgc gaccggctcg agatactcga ggaagatggc ttctgcttcc
      781 ccgaccgact cgatctggaa gaggcgctgg cgtagggcac tggagccgtg cagcccccgg
      841 gtgtaccacc ctaggtgctt ccggaactcc agaacagtcc ggcgggtgtc gccctgcagc
      901 cgaattgcga gtttggcgtg ctgcagagcg acggtaaacc gttcggccgc tgaaggggac
      961 gatggcgcgg catgacccga caggagtgcc cggccatccc gaaagagcca tggattgccg
     1021 aacgcgccgc ggcccaccat gacgccggcg cacccggtgt ggtcgcgcat gcggacgatg
     1081 tcgtcaccag actcgatgtc cccattaccg atgaccggaa tatcgagcgc ctccactacc
     1141 ttggcgatct catcccagtt cgccttgccc gaaaacatct gagtacgggt gcgggcatga
     1201 agggtgaacg cc
//
LOCUS       DASRPQ010001582         2546 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1457105, whole genome shotgun sequence.
ACCESSION   DASRPQ010001582 DASRPQ010000000
VERSION     DASRPQ010001582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2546
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1457105"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(16..837)
                     /locus_tag="VFD73_18000"
     CDS             complement(16..837)
                     /locus_tag="VFD73_18000"
                     /inference="COORDINATES: protein motif:HMM:TIGR03871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HZI75877.1"
                     /translation="MSGRVRRTSWVWLLTAIAGCHAGKPPRELRVCSDPNNLPFSNQR
                     QEGFENRVAELIAGEMHARVRYTWWAERRGFLRNTLNAGLCDLVMGMPPGTGGVLTTR
                     PYYRSTYVFVSRRDRHLKVSSLDDPVLRKLKIGVQLVGDDYANTPPVHALSRRGIVDN
                     IVGFRVVGDYAQANPPARIIDAVAAGEVDIAVAWGPLAGYFAQQSRVPLELTPVRPAF
                     DPPALRFVFDIALAVRKDEQALRDELNQVLEKRKAGVDSILTRYGVPLVSDSTGS"
     gene            complement(834..>2546)
                     /locus_tag="VFD73_18005"
     CDS             complement(834..>2546)
                     /locus_tag="VFD73_18005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75878.1"
                     /translation="CTTSAGPGRRYLFRVQRLSRSLLLFAPVLLGYAARAPGPVQSSS
                     SGLAAAESLYADLRDRRDRIDVTLASGQTTAADLDSGSIQRYNELRRTVAVRLAAIDS
                     RTLRNDDGRAFSVMRQTLERDLDSLPLRAGSPPASAPECNYDAGGIARLSGGLDSLRK
                     RIYACYGWAQSHVVVDQDTLDRLTVLASLGRTTESTRRRQLFLALDPIWRSMNATDLP
                     GSPYRQLIAAETSHRSGGESPAARQARASGLPPDSLEHWLLNILETWRAANADSLVEP
                     WDWFYMVGRASRMLSPRISLQKMFQLNREVYRSLGADVERLGVHFDVQPREGKTPVAY
                     TTFGSRPRFINGRWRPGEPWVFATYPVGGLDNLNELLHETGHAIHIAAIRTRPAFADW
                     PDSDPFTEAVADFMALEVYEPSWQQHWLGDSVPLVDGLRGRYGGIVLDVAWALFEIRM
                     QRDITADPNQVWTALTRDYLRIRPHPELSWWAMRGQLVDAPGYMMNYAAGAMIIAAIR
                     DRTRELHGRFSAGDSTWYRWIAFRLYRFGLERPTREVIQNFLGGTVTPAAILHDMRRM
                     RAKQ"
BASE COUNT          464 a          793 c          832 g          457 t
ORIGIN      
        1 ctgactcgga gttgatcagc ttcctgtcga gtcggatacc agagggacgc cgtaccgggt
       61 caggatgctg tccacaccgg cctttctttt ttccagcacc tggttcagct cgtctcgtag
      121 cgcttgctcg tccttgcgca ccgcaagcgc tatgtcgaac acgaacctga gcgcgggcgg
      181 atcgaaggcg ggacgcaccg gcgtcagctc caggggcacc cgggattgct gggcgaagta
      241 tccagcgagc ggcccccatg cgaccgcgat gtcaacttct cctgctgcca ccgcgtcaat
      301 gattcgcgct ggagggttgg cctgagcgta atcaccgact acccggaacc ccacgatgtt
      361 gtcgacgatg cccctccggc tcagtgcgtg aaccggagga gtgttggcgt agtcgtcacc
      421 caccagctgc actccgatct tgagcttgcg gagaactgga tcatcgagag agctcacctt
      481 gagatgccgg tcgcgccgcg acacgaagac gtaggtcgag cggtagtacg ggcgagtggt
      541 cagcactccg ccagtgccgg gaggcattcc catcaccaga tcgcacaggc cggcgttcaa
      601 ggtgtttcgc aggaaccccc tgcgctcggc ccaccaggtg taccgcactc gggcatgcat
      661 ctcgcccgcg atcagctcgg caacccggtt ctcgaatcct tcctggcgtt ggttcgagaa
      721 gggcagatta ttggggtcgg agcacacccg aagctcacga ggtggctttc cggcgtgaca
      781 gcccgcaatt gccgtgagga gccataccca gcttgtccgc cgtacgcggc cgctcattgt
      841 ttcgcccgca tccggcgcat gtcgtgcaga atagccgctg gtgttaccgt gcctcccaga
      901 aaattctgga tgacctcgcg ggtcggccgt tcgagtccga agcggtacag tcggaacgcg
      961 atccagcgat accaggtcga gtcgcctgcc gagaaccgac cgtgcagctc ccgggtgcgg
     1021 tcccggatcg cagcaatgat catggcaccg gcggcgtagt tcatcatgta gccgggagcg
     1081 tcaaccaatt ggcctcgcat ggcccaccag gacagttccg gatgcggccg gatcctgaga
     1141 tagtcgcggg taagagcggt ccatacctga ttgggatcgg cggtgatgtc gcgctgcatg
     1201 cggatttcga atagtgccca ggcgacgtcg agcacgatcc ctccataacg gccgcgcagc
     1261 ccatcgacca gaggcaccga atcgccgagc cagtgttgct gccagcttgg ctcatagacc
     1321 tcgagtgcca tgaagtcggc gacggcttcg gtaaacgggt cgctgtcggg ccagtcggca
     1381 aatgcgggac gggtgcggat cgcggcgatg tggatggcat gccccgtctc gtgtagcagc
     1441 tcattcagat tatccaggcc gccgacggga taggtcgcga acacccacgg ctcccccgga
     1501 cgccagcgac cattgatgaa gcgtggccgc gatccaaagg tggtgtaggc caccggcgtc
     1561 ttgccctcgc gcggctgcac gtcgaagtgc accccgagtc gctcgacatc ggcgccgagg
     1621 gagcggtaga cctctcgatt cagctgaaac attttctgga gcgagatccg ggggctcagc
     1681 attcggctgg cccggcccac catataaaac cagtcccagg gctccaccag cgaatctgcg
     1741 ttggctgccc gccatgtctc caggatattc agcagccagt gctccaatga atcgggcggt
     1801 aggccggacg cgcgagcttg ccgagctgcc ggcgactcgc ctccgctccg gtggctcgtt
     1861 tcggcggcaa tcagctgccg gtacggactg ccggggagat cggtggcgtt catgctgcgc
     1921 cagattggat cgagggccag gaagagctgc cgccgccgag tgctctcggt ggttcgccct
     1981 aatgacgcca gaaccgtgag ccggtccaga gtgtcttggt ctaccacaac gtgagactga
     2041 gcccagccgt agcaggcgta gatccgcttt cgcagtgagt cgagcccgcc gctcagccgc
     2101 gcgatgcctc ccgcgtcgta gttgcactcg ggggcgctgg caggcggcga tcccgctcga
     2161 agtggaagcg aatccagatc acgctccagg gtttgccgca taacggagaa agctctgccg
     2221 tcgtcgttcc gaagcgtcct ggaatcgatt gccgccaggc ggacggccac ggttcgcctc
     2281 agttcgttgt agcgctgaat cgagccagag tctaggtcag ccgccgtggt ttggccggaa
     2341 gccagggtga catcgattcg atcgcggcgg tcccgaaggt cggcgtagag tgattcagcg
     2401 gcggcgagtc ccgaggagga gctctgaacg ggaccaggtg ctcgtgccgc atagccaagc
     2461 aggacggggg caaagagaag caggctgcgg gagagtcgct gcactcgaaa aagatagcgc
     2521 cggcctgggc cggcgctcgt ggtgca
//
LOCUS       DASRPQ010001583         1221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3353085, whole genome shotgun sequence.
ACCESSION   DASRPQ010001583 DASRPQ010000000
VERSION     DASRPQ010001583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3353085"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(195..494)
                     /locus_tag="VFD73_18010"
     CDS             complement(195..494)
                     /locus_tag="VFD73_18010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75879.1"
                     /translation="MRRGRQDRPASKVRQAQRDRKDKQDRQGHKDRQDRQEQKGQRVQ
                     PARKDQQVQRERKEWRVSKALRDRPERKGCRDRQELPGRRDQQVRQDQKAVLAQG"
     gene            complement(863..>1221)
                     /locus_tag="VFD73_18015"
     CDS             complement(863..>1221)
                     /locus_tag="VFD73_18015"
                     /inference="COORDINATES: protein motif:HMM:NF013786.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HZI75880.1"
                     /translation="IEEIRPDCPVDDLARRYYSAREHAWLRTLQPPERLKAFYRLWTI
                     KEAVLKCAGLGLSVPPQVVEVHLAKSGAPSITSRDESRKALEQLQVRELQVTAGYAGS
                     LAAEAYTGIRVVVEAP"
BASE COUNT          198 a          421 c          349 g          253 t
ORIGIN      
        1 ggccgtaccg ccgatatcga atgtgccttg cacgatgcca tccgacgggc gaactttcgt
       61 aaccagcttg cttccggggt gcgacaccca gatgctctcg ccatcgaaag ccagtgccga
      121 tggcgcactg tctagtgcaa actcgccggt gttggaagcc tcgtaccagc gcagcatccc
      181 gatctggatc ggattcagcc ctgcgccagg acggccttct ggtcctgccg gacctgctga
      241 tcccgccggc ccgggagttc ctgccggtcc ctgcaaccct tgcgctccgg ccggtcccgc
      301 aacgccttgc ttacccgcca ctccttgcgc tcccgctgga cctgctggtc cttgcgcgcc
      361 ggctggaccc gctggccctt ttgctcctgc cggtcctgcc ggtccttgtg cccctgccgg
      421 tcctgtttgt ccttgcggtc ccgctgggcc tgccggacct tgcttgccgg ccggtcctgc
      481 cgacccctgc gcacccgctg gtcctgccgg tccctgtgcc cctgccggtc ctgcgggccc
      541 ctgtggtcca ggagggcctg ccggtccggg aggtccctgc ggtccggctg tgccgttgca
      601 gctcgggtcg tgcggattgc ccgtcgaaca aggcgggtgg ttcgaattgc cctgagcctg
      661 cgccagatcg gccgaaccta tcatgaaaaa taagagagcg agacttgcga gaatggcgaa
      721 cgccttataa agtcgcatat ttgtttctac ctgtccaaat ggagctactt acacaatgcg
      781 ggacgactta ctgaggatca atcaggtaca cacccgccaa acagttcctg gtggaaatcg
      841 ggtaccggta ctggtacctg acttatgggg cttctacaac aactctgatg ccagtatacg
      901 cctcggccgc aagggaacca gcgtagcccg ccgtcacctg aagttcccta acctgaagtt
      961 gttctagcgc tttccggctt tcgtcccggc ttgtgatcga aggcgcgccg ctcttcgcca
     1021 aatggacctc gaccacctgc ggcggcaccg acaagcccaa ccccgcgcac ttcagcacgg
     1081 cctctttaat ggtccacaag cggtaaaacg ctttcaaccg ttccggaggc tgaagcgtgc
     1141 gcaaccaggc gtgctcccgg gccgagtaat accggcgcgc gagatcgtct accgggcaat
     1201 ccgggcgtat ctcctcgata t
//
LOCUS       DASRPQ010001584         1917 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4579172, whole genome shotgun sequence.
ACCESSION   DASRPQ010001584 DASRPQ010000000
VERSION     DASRPQ010001584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1917
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4579172"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1287)
                     /locus_tag="VFD73_18020"
     CDS             complement(<1..1287)
                     /locus_tag="VFD73_18020"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HZI75881.1"
                     /translation="MRDIALGERHHLPHGSGLGVSFATERLYRTIGDLAPGFLWLVDG
                     NGQVVYVNRTWEEFTGSNLAELNRNGWAAYNHPAEAAQAEALWKEATEQQTPFEMELR
                     YRRCDGEYRWMMARVVPLRQLGGDLEGWVGTAVDTHELKATQEALSRSEAELEDFFEN
                     AAIPIHWVGPDGTILRVNQAELDLLGYRREEYVGRNIVEFHVDRSAIDDILKRLTAGE
                     VLHDYPARLRCRDGSIREVLIDSSVYFENSEFQHTRCFTRDVTAQRASEEATQRLAAI
                     VASSADAIVGKTLEGVVTSWNAAAERMFGYTSEEMVGSSIFRLIPEELHASEHELLQQ
                     VRRGEPAGLTEVERIRKDGQRLYISLTVSPVRNARGQVVGVASIKRDVTERRYAQEAL
                     AQSQERLQLALSAARMATWRWNPETNHLSWDEGLKQL"
     gene            1382..1452
                     /locus_tag="VFD73_18025"
     tRNA            1382..1452
                     /locus_tag="VFD73_18025"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1414..1416,aa:Gln,seq:ttg)
     gene            complement(1455..>1917)
                     /locus_tag="VFD73_18030"
     CDS             complement(1455..>1917)
                     /locus_tag="VFD73_18030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75882.1"
                     /translation="KWEFVKPVMMDVSASDSMLFERNGRWWLLTNLERTGRGDFRSEL
                     YLFSADSPLSDTWTPHPKNPIKIDPAGGRNAGLLRDGHRLFRAGQVQGFDRYGEGIRL
                     FEIVSLSPQDYCERLVTEIRPEFRRGLLGTHHLASTGKVTVVDSHTREFIW"
BASE COUNT          351 a          622 c          569 g          375 t
ORIGIN      
        1 aagttgcttg agaccctcat cccagctcag gtggttggtc tccgggttcc aacgccacgt
       61 tgccattcgg gcggcgctca gcgcgagctg cagccgctcc tgactttggg ccagcgcttc
      121 ctgggcgtat cggcgttcgg tcacatcacg cttgatggat gcgaccccga ccacctgtcc
      181 ccgggcattc cggaccggtg acaccgtaag cgagatatag agccgttgcc catccttccg
      241 gatccgctcc acctcggtca ggccggcggg ctcaccccgg cggacctgtt ggagcagctc
      301 gtgctccgat gcatgcagtt cctccggaat caagcggaag atggagctac cgaccatctc
      361 ctccgacgtg tagccgaaca tccgctccgc ggcggcattc cagctggtca ccacaccctc
      421 gagggtcttt cccacgatcg catcggccga cgaggccacg atggcggcca gccgctgggt
      481 tgcctcttcc gaagcacgct gcgcggtaac gtcgcgggta aagcatctgg tgtgctgaaa
      541 ttcggagttc tcgaagtaaa cgctggaatc gatcaggact tctctgatgg agccatccct
      601 gcagcgaagg cgggcgggat aatcgtgcag gacctcgccg gcggtcagcc gtttcaggat
      661 atcgtcgatg gccgatcggt cgacatggaa ctcgacgatg ttgcggccga cgtactcctc
      721 ccggcggtac cccagcagat cgagctccgc ctgattgacc cggagaatgg ttccgtcggg
      781 tcctacccag tgaatcggga ttgccgcgtt ctcgaagaaa tcttccagct ccgcctcgct
      841 gcggctgagc gcttcctggg tggccttgag ctcgtgagta tcgaccgcag ttcccaccca
      901 cccttcgagg tcgccgccaa gctgccgcag cggtaccacc cgggccatca tccagcggta
      961 ttcgccgtcg cagcggcggt agcggagctc catctcgaac ggagtctgct gttcggtcgc
     1021 ctccttccac agcgcctcag cctgtgccgc ttctgcagga tgattgtagg cggcccagcc
     1081 gttccggttg agctccgcca ggttcgagcc ggtgaattcc tcccaggtgc ggttcacgta
     1141 gacaacctgg ccgttcccat ccaccagcca gaggaaaccg ggagcgagat ctccaatggt
     1201 gcggtagagg cgttcggtcg caaaggacac accaagccct gacccatggg gtaggtggtg
     1261 ccgctctccc agggcgatgt ctctcatatc aggcgtcggc cagtgccatg tcgttcatac
     1321 cgctcaatct tcagcgacca tttgacagga gcaagggtgt ggctagcgtt catgcccata
     1381 ctggcccttc gtccaatggc aggacagcgg actttggatc cgttaatggt ggttcgaatc
     1441 caccagggcc aatcctacca gataaactcg cgagtatggc tgtccaccac cgtcaccttc
     1501 ccggtgctgg cgaggtgatg agttcccagc aagcctcggc gaaactccgg acggatctcg
     1561 gtcaccagac gctcgcagta gtcctggggc gataacgaga cgatctcgaa gagtcgaata
     1621 ccttctccgt agcggtcgaa cccctggacc tggcccgccc gaaacagccg gtgaccatcg
     1681 cgcagcagcc ccgcgttgcg gcccccggcc gggtcaatct tgatgggatt cttcgggtga
     1741 ggagtccacg tatcgctcag cggagagtca gccgaaaaca ggtacaactc ggagcggaag
     1801 tcgcctcgcc cggttcgctc gagattggtg agcagccacc agcgaccatt ccgctcgaag
     1861 agcatggagt ctgaggcgga cacgtccatc attaccggtt tcacgaactc ccatttg
//
LOCUS       DASRPQ010001585         1028 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2999822, whole genome shotgun sequence.
ACCESSION   DASRPQ010001585 DASRPQ010000000
VERSION     DASRPQ010001585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2999822"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..691)
                     /locus_tag="VFD73_18035"
     CDS             complement(104..691)
                     /locus_tag="VFD73_18035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75883.1"
                     /translation="MVDNPNNPFAGDDRLWVRFEMVPVEDPEKTKEAGRTICVDVPHV
                     EIRTPGDRDNVLYRAMTELDKQRFRKRYEEWMKTQTDEPMEGTPLSEVPIFKRREVEE
                     CRYMNIYTLEQLAGMSDTHIKKDRGLFGYREKARSYLDVSLRGKEASKLQAEKEALDN
                     KFQALTAASAEQAALIKQLQAQLLSMAQAAAEKAK"
     gene            complement(730..>1028)
                     /locus_tag="VFD73_18040"
     CDS             complement(730..>1028)
                     /locus_tag="VFD73_18040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75884.1"
                     /translation="DGARGKVPSIILSNCIPFGDAPGYSAGKNTQRGNFNTLVSAYAG
                     AHGGDGVALADCESTVWDAGDHTKVAPTMLAADNETLNDTGHAALEALIGPMLP"
BASE COUNT          147 a          332 c          318 g          231 t
ORIGIN      
        1 aattcaaccc acactccacc gccacgttgt tgattagcgt cccgatggag gggaactgcg
       61 cctgtagcca gccgacgcta ggagtgggct cctgggccat gatttacttc gccttctccg
      121 cggccgcctg ggccatggag agcagctggg cctgcagctg cttgatgagc gcggcctgct
      181 cggcggatgc cgcggtgagc gcctgaaact tgttgtccag ggcttccttc tccgcctgca
      241 gcttgctggc ctctttgccg cgcagcgaga cgtccaggta gctgcgggcc ttctcccggt
      301 agccgaagag gccccggtcc ttcttgatgt gggtgtccga catgccggcc agctgctcca
      361 gcgtgtagat gttcatgtag cggcactcct cgacttcgcg ccgcttgaag atggggacct
      421 ccgacagagg ggtgccctcc atcggctcgt cggtctgcgt cttcatccac tcttcgtagc
      481 gcttcctgaa acgctgcttg tcgagctccg tcatggcccg gtacagcacg ttgtctcggt
      541 cccccggcgt acggatttct acgtgcggca cgtccacgca gatggtgcgg ccggcttcct
      601 tcgtcttctc cgggtcctcc accggcacca tctcgaaacg cacccacagc cggtcgtctc
      661 cggcgaatgg gttattcggg ttgtccacca tgatttgctg atactggctt gctgtttcca
      721 tgtcgtctcc tagggaagca tcgggccgat gagggcttcc agtgcggcgt gccccgtgtc
      781 attgagcgtt tcgttgtcag ctgcgagcat cgtcggggcg accttcgtat ggtctccggc
      841 gtcccacact gtactctcgc aatctgccaa ggcgacgccg tcaccgccgt gggcgccggc
      901 ataggccgac accaaggtgt tgaagttgcc gcgctgggta ttcttgccag cggagtagcc
      961 cggagcgtcc ccgaagggga tgcagttgga gaggatgatg gacggcacct ttcctcgggc
     1021 cccatccg
//
LOCUS       DASRPQ010001586         1618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2373299, whole genome shotgun sequence.
ACCESSION   DASRPQ010001586 DASRPQ010000000
VERSION     DASRPQ010001586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2373299"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(137..391)
                     /locus_tag="VFD73_18045"
     CDS             complement(137..391)
                     /locus_tag="VFD73_18045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75885.1"
                     /translation="MSPPVCRRFSVKRKIENSLSNPADHLAHLGAMDSAELLERAHRY
                     RIVAAGLTDEQTKAGLLDLADKYEALARELEQARPESNKT"
     gene            390..566
                     /locus_tag="VFD73_18050"
     CDS             390..566
                     /locus_tag="VFD73_18050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75886.1"
                     /translation="MPERWDAAEYRKRAKAWREKAAALPETDPGRTACLTLGEGYENL
                     ANLLEQRCKLPFEP"
     gene            716..1528
                     /locus_tag="VFD73_18055"
     CDS             716..1528
                     /locus_tag="VFD73_18055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75887.1"
                     /translation="MPASICTACGTQYPPAEAPPRTCLICTDERQFIPASGQSWTTLE
                     GLRNAHSNKFRHLAAGLMTIETTPAFGIGQRAIVARTPAGNVLWECLALVDEATVDLL
                     KGLGGVTAIAISHPHYYTTMVEWSRALGGVPIHLHLADRQWVMRPDPVVQFWDGDTKP
                     IGPGLTLIRLGGHFDGGTVLHWADWSEGRGALLSGDILQVVPSGHVSFMWSYPNLIPL
                     SAATIRRMAEILEPFAFDAVYGSFSGRGQIDTNGKQMVAASVARYIARISET"
BASE COUNT          289 a          492 c          519 g          318 t
ORIGIN      
        1 gctcaacgtg ctggcgatcc tgatgggcga aggcttctca atgttctatc aggatgccga
       61 cgacagggtg tgacccggat cgccggcgtg gtgaccggag ctggtagccc tcctgtgggc
      121 cgctcgctgg tctacttcac gttttattgg attctggcct ggcctgctcc aactccctgg
      181 ccagggcttc gtacttgtcc gccaaatcga gcaggcctgc tttggtctgc tcatcagtta
      241 ggcccgcagc gactattcga tagcggtggg cgcgttctag gagttcagca gaatccattg
      301 cccccaaatg ggcaagatgg tctgccggat tggacaagct attttcaatt ttccttttga
      361 cagaaaatcg acggcatacg ggaggagaca tgcccgagag gtgggatgcg gcggagtacc
      421 gtaagcgcgc caaagcgtgg cgcgagaaag ctgctgctct gcccgagacc gatccgggtc
      481 gcacggcctg tctgacgcta ggggaaggat atgagaatct ggcgaatttg ctcgaacagc
      541 gctgcaaatt gccgtttgag ccataggccg tgacgcgtcc cggtatgcct cctgcctggg
      601 ttctcggggc tgcgtgccac ccgcgacgga cggcttgggc gccagaggat ttggcgttcc
      661 actcggcggc cggcagaggg tgcccgcgag cgaggaccgg tgtatcctgc ccttcatgcc
      721 agcctccatc tgcaccgcct gcggcacgca atatccgccc gccgaggctc cgccccgcac
      781 gtgtctgatc tgcaccgacg agcgacagtt catcccggcc tcgggccagt cctggactac
      841 gcttgagggg ctgcggaacg cgcatagcaa caagttccgt cacctcgcgg cggggcttat
      901 gaccatcgag accacccccg cattcggcat cggccagcgc gcgatagttg cacgcacgcc
      961 agccggcaat gtgctgtggg agtgcctcgc cctggtcgac gaagccacag tcgatctact
     1021 gaagggactg ggcggcgtca cggcaatcgc gatctcccac ccgcactact acacaacgat
     1081 ggtagagtgg agccgtgcgc tcggtggcgt gccaatccat ctgcatctcg ctgatcgtca
     1141 gtgggtgatg cggccggacc ccgtggtgca gttctgggat ggggacacca agccaattgg
     1201 gccgggcctc acgttgattc ggctgggagg gcatttcgac ggcggcaccg tcctgcactg
     1261 ggcggactgg agcgaaggcc gcggtgcact gctctccggc gacatcctac aggtggtccc
     1321 gagtgggcac gtcagcttta tgtggtccta tccgaatcta ataccgctct ctgccgccac
     1381 gattcggcgc atggcggaga ttctggaacc atttgcattc gatgcagtct acggctcgtt
     1441 ttcaggtcgg gggcagatag acacaaacgg caagcagatg gtcgctgcct cggtcgcacg
     1501 ctacatcgcg cggatcagcg agacgtagct gcggaacggc gctcatccct ccccgttcgc
     1561 aagccgcagc agcacgtcgc agtggcaggg caacggtggg caccggatgt gatgttga
//
LOCUS       DASRPQ010001587         1081 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_495007, whole genome shotgun sequence.
ACCESSION   DASRPQ010001587 DASRPQ010000000
VERSION     DASRPQ010001587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_495007"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..146
                     /locus_tag="VFD73_18060"
                     /pseudo
     CDS             1..146
                     /locus_tag="VFD73_18060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553139.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="IS701 family transposase"
     gene            327..1070
                     /locus_tag="VFD73_18065"
     CDS             327..1070
                     /locus_tag="VFD73_18065"
                     /inference="COORDINATES: protein motif:HMM:NF033580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZI75888.1"
                     /translation="MDLIATIIGFCAPPHDRGRGHPPTETIRVLATLRQFLREGTPWR
                     RLQATAAQASGSTLRRYLGQWAHSGLLAQVHAVLVAMLRGDPTLILDSCSARAKRGGE
                     LTGPNPTDRGKRGTKYHIATTGDGVPVACAATAANVNDTVVFERLFLAAFAIMARIQT
                     VFADKGYDAEHHRKLCRAFGAEPHIHKRGQPHGSGLGQRRWPVERSNAWVLENKRLAL
                     RYDRLGFIIQSLLQAACIFLVAGRVAREL"
BASE COUNT          180 a          353 c          348 g          200 t
ORIGIN      
        1 atgcccggcc ctggcgcacg caagctgtcc tgtcacaggc cttgtggagc caagacaagg
       61 cccgggcttt gtgccgcagc tatgtggtcg aacatttggg tgcgccggat ggtgttctgg
      121 tcgtggatga gaccggtttc ctgaagataa gaggcggttt tcactaatat ctaagattga
      181 gtgaaggtga ttgcgcggtc cgatcagccc ctcctggacc gatccgagtg atcacggcga
      241 cctcagcctc gatccccggc agcgctcgtc atcgatcccc atatctggat catcagacag
      301 gggagaaggc tttggatttc aggatcttgg accttattgc gaccatcatc ggcttctgcg
      361 cgccacccca tgaccggggc cggggtcatc ccccaaccga gacgatccgg gtgctggcga
      421 ccttgcggca gttcctgcgt gagggcacgc cttggcgccg cctgcaggcg acagcggccc
      481 aggccagcgg ctcgaccctg cgccggtatc tggggcagtg ggcgcacagc ggcctgttgg
      541 cgcaggtcca tgccgtgctg gtcgccatgc tgcgcggcga cccgaccctg atcctggata
      601 gctgctcggc ccgggccaag cgcggtggcg agctgaccgg acccaatccc accgaccgcg
      661 gcaagcgggg caccaagtac cacatcgcga ccaccggcga cggcgtcccg gtcgcctgcg
      721 cggccacggc ggcgaacgtg aatgataccg tggtcttcga gcggctgttc ctggccgcct
      781 tcgcgatcat ggcccgcatc cagaccgtat tcgcggacaa ggggtatgat gccgagcacc
      841 atcgcaagct gtgtcgggcg ttcggggccg agcctcacat ccacaagcgc ggccagccgc
      901 acggatccgg tttgggccag cggcgctggc cggtcgagcg ctccaatgcc tgggtcctag
      961 agaacaagcg tctcgcgcta cgctatgacc ggctcggctt catcatccag tcactgctcc
     1021 aggccgcttg catcttcctg gttgcaggac gcgtggctcg tgaattgtga aaaccgcctc
     1081 t
//
LOCUS       DASRPQ010001588         1072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4580154, whole genome shotgun sequence.
ACCESSION   DASRPQ010001588 DASRPQ010000000
VERSION     DASRPQ010001588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4580154"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..601)
                     /locus_tag="VFD73_18070"
     CDS             complement(<1..601)
                     /locus_tag="VFD73_18070"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HZI75889.1"
                     /translation="MDFSLSAEQEELKAAAVDFARRELDQDLAKREEAGEFSPQAWRA
                     CAKFGIQGLPVPAELGGGGADILTTVLVMEALGYGCHDNGLLFSLNAQMWSLELPLVK
                     FGTPAQQQAYLPGLVSGDLVGVHAMTEPDSGSDAFSMRTRVERKGDGYLLNGTKLYIT
                     NAPVSDVVLVFAAHPGKPKMAAISAFLVEKGTPGFSVTRG"
BASE COUNT          192 a          370 c          328 g          182 t
ORIGIN      
        1 ggccgcgagt cacgctgaag cccggcgtcc ccttctcgac gagaaaagcg gagatggctg
       61 ccatcttggg cttgccgggg tgcgcggcga agaccagcac gacgtcggag accggggcgt
      121 tggtgatgta cagcttggtc ccgttgagca ggtagccgtc gcccttgcgc tccacgcggg
      181 tccgcatgct gaacgcgtcg gacccggagt cgggctcggt catcgcgtgc acgccgacga
      241 ggtcaccaga gaccagcccg ggcaggtacg cctgctgctg cgccggcgtg ccgaacttca
      301 ccaagggcag ctccaggctc cacatctgcg cgttcagcga gaagagcagc ccgttgtcgt
      361 ggcagccgta gccgagcgcc tccatgacca gaactgtcgt caggatgtcg gcaccgccgc
      421 cgccaagctc ggccgggacc ggcaggccct ggatgccgaa cttggcgcag gcccgccatg
      481 cctgcgggga aaactcaccc gcctcctcgc gcttggccag atcctggtcc agttccctgc
      541 gggcgaagtc gaccgccgcc gccttgagct cctcctgttc ggcgctcagc gagaagtcca
      601 acttctcccc cccgccctca accgagctcc gcgcccagcc accctggctg ttccggccga
      661 ttgcgcggtc aatatcagtt tgagcgcgtc catcctctcc ccattatctg gacaacctct
      721 cccgtttatc tggacaacga cggggtgaat cccccattac cagacaacga cggggtcaat
      781 agtggcacga ctagttgcgc caccgcggaa aaacgcggat acaagcggtc atcctgggaa
      841 gactcgaaga ttctggcttg ctgaccgcca tgcgccacca gatcttcttg ccaacgcaaa
      901 cgtgcgggcc gccccggctg ggacggcccg cacgggaaac cgattgagtg ctgagagtgg
      961 tcagaacttt ccggccttga tgtccgccag cgtcacccga atgacacggt aagtgtccac
     1021 cgatgacggc aagtccccgt gggggtgcat taccgacttg atcggcatcc cg
//
LOCUS       DASRPQ010001589         1206 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3949442, whole genome shotgun sequence.
ACCESSION   DASRPQ010001589 DASRPQ010000000
VERSION     DASRPQ010001589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1206
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3949442"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..347
                     /locus_tag="VFD73_18075"
     CDS             <1..347
                     /locus_tag="VFD73_18075"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZI75890.1"
                     /translation="GSIINFGSVSWKLAQGGMPAYTSAKAAVHGLTRGLARDFGKDGI
                     RVNTVVPGWVMTERQLKLWVTPEAEKQIDQGQCLSGRVQPVDLARMVLFLASDDARMC
                     SAQEFTVDGGWV"
     gene            complement(358..786)
                     /locus_tag="VFD73_18080"
     CDS             complement(358..786)
                     /locus_tag="VFD73_18080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75891.1"
                     /translation="MARHKGWRLSVLMILVLACEPGISRSMAQDMRNATHNALFDNRM
                     MGFSSSAGWLAATCENQDPHSQGTCKGVIWAIAERMASEHRICIPMNVTYMFQVTLAE
                     IAKFRITLPEVMVDPDKASRWSTPLRGVVEQILADKFPCG"
BASE COUNT          208 a          384 c          384 g          230 t
ORIGIN      
        1 gcggctcgat catcaatttc ggctcggtga gctggaagct cgcccagggc ggcatgccgg
       61 cctacaccag cgccaaggcg gccgtccacg gcctcacccg gggtcttgcc cgcgacttcg
      121 gcaaggacgg catcagggtc aatacggtgg tgcccggctg ggtgatgacc gaaagacagc
      181 tcaagctctg ggtcacgccc gaggccgaga agcagatcga tcagggtcaa tgtctcagcg
      241 gcagggtcca gcccgtcgac ctcgcgcgca tggtgctgtt cctggcatcg gatgacgcac
      301 gcatgtgctc tgcccaggaa ttcaccgtcg atggcggctg ggtctaggca gacggcccta
      361 gccgcatgga aatttgtcgg cgaggatttg ctcgacgacg cctctgagcg gggtcgacca
      421 gcggcttgcc ttgtccggat cgaccatgac ctcgggcagg gtgatcctga acttggcaat
      481 ttccgcaagc gtcacctgga acatgtaggt gacgttcatg ggaatgcaga tcctgtgctc
      541 ggaggccatt cgctcggcaa tcgcccagat cacccccttg cacgtgccct ggctgtgcgg
      601 atcctgattc tcacaggtgg ccgcgagcca gccggcgctt gatgaaaatc ccatcatgcg
      661 gttgtcgaac agggcgttat gggtggcatt gcgcatgtcc tgcgccatcg atcgtgaaat
      721 tccgggctcg caagcaagga cgaggatcat cagcaccgat agtcgccagc ccttgtgccg
      781 tgccatgccg atccatccgc cttcgccatt ttttgcttcc ccgagaataa cttagctcgg
      841 gctcaaatca aatcgactca gcgcatgggg gctggcgggc ttggggcagg gtcggacttt
      901 ccgccggcaa cccgctgggt ggaggacacg gccttccggg cagccggcag gaaggtggtt
      961 tcgatgaggc tgcggatgac cggttccgtc gcctccgccc cgagccgcgc cgacagcgtg
     1021 cgggccatct cgttgaagga ttgacggcac tcgccctccg ccgcgcggat cagcagatct
     1081 gctcaggtcg tcttgttgtc ccgggcgatg ttgcgcaccg cgaaccccgc gatgcagtcg
     1141 cggaaccgca ccaccgccgg actgccttga tgggtccacc acagggtccg ctcctcctga
     1201 tcatcc
//
LOCUS       DASRPQ010001590         2740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1458808, whole genome shotgun sequence.
ACCESSION   DASRPQ010001590 DASRPQ010000000
VERSION     DASRPQ010001590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1458808"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            287..1492
                     /locus_tag="VFD73_18085"
     CDS             287..1492
                     /locus_tag="VFD73_18085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75892.1"
                     /translation="MTAPPAPTGSIVVTPSRLVLGVGMSRQVTATVRDQSGAPVAGAT
                     VSFVSSDSGRVRVTPDGVASYVGPGEAEIRVSSQDLEAAMPYTGLGSGHPARLVTTST
                     RLPGDREGDAPFGVAVDGQGRILISQADSGLVVSDFYPITGPTARSVDGSPTSIALLA
                     GGTALVTPTGADDQNASIIDLSSDRVLSQVPLGDTAYSAVTAPDSHTVYLGTTHGRVL
                     VFDASSSSVTDTIGLELAHSRLNHLALNSAGTLLYASSFTSGAISEIDLAQQKEARIF
                     IVGGEPQGLALTPDGSELYVANEAGNGHIDIYNVVTNVHEASIPSGASTSVGGAFGLA
                     ISPDGSKVYVGVTSNEGPGLIQLLDTGTRAITRTFNSCGSTPRRIAFGYSGGLAVIAD
                     ESGCATFVE"
     gene            1539..2165
                     /locus_tag="VFD73_18090"
     CDS             1539..2165
                     /locus_tag="VFD73_18090"
                     /inference="COORDINATES: protein motif:HMM:TIGR02999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZI75893.1"
                     /translation="MKHDDEETGDRPSISALLLQLRAGDSEAMNRLFPLVYGELRRLA
                     HWQLQHERTGHTLDTGALVHETYLKMVDQPRVHWQDRAHFFRVASWAMRRILVDYARR
                     YGAQRRGGGVAAQTLDDRVAIAQQSEQVLALDEALERLAAVHQRLSQVVECRWFGGLS
                     ETETAEALGVTPRTVQRDWRKARAWLVLELGGEPVATRASHPHRDIES"
     gene            complement(2144..2560)
                     /locus_tag="VFD73_18095"
     CDS             complement(2144..2560)
                     /locus_tag="VFD73_18095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75894.1"
                     /translation="MRFTIGKLAGAIAPLSLLLACASSGATGQDLNVITAPELARADA
                     GSTYDAIRHIRPEMLRSRDPGSLMLFKALRPAVAVDNKVLGGIETLRGIPADQVARLE
                     YVSASKATSRYGRIFRDGIVLVQTRDSSGSQLSISR"
BASE COUNT          531 a          847 c          879 g          483 t
ORIGIN      
        1 ctccccggcc atgcgatggt gatcgcaggc agtgcaggta tggatggagt tggattgacg
       61 gttagaggtc cagcagggcg aatgtgcggg agagaattgg tttacgccag aagcttttta
      121 ctggccgaac tggggggtag acccacacgg tacgccaggc tacgctattt ctgtctcagc
      181 caaccgacct cccgagtgaa ccgtgcagaa ccaattcata ccgcatcgag ctcttgtctg
      241 ccgggcaatc gtgctctcgg cggccatcgg gtgcagctcc gatcaaatga ccgcaccgcc
      301 ggctcccacc ggcagcatcg ttgtgacgcc cagtcgcctc gtcctcggcg tgggcatgtc
      361 ccgtcaggtc acggcgacgg tccgggacca gtctggcgct cccgtagccg gtgctaccgt
      421 cagcttcgtt tccagtgatt ccgggcgagt aagggtgaca ccggatggcg tggccagtta
      481 cgtcggccct ggggaggcag agatccgggt cagcagccag gacctcgagg ccgcgatgcc
      541 ctacaccggg cttggatccg ggcacccagc cagactggtg accacgtcca cgcgattacc
      601 gggtgatcgt gagggcgacg caccgttcgg agtggcagtg gatgggcagg ggaggatcct
      661 catctctcag gccgacagcg gactcgtcgt gagcgacttc tatcccatca cgggccctac
      721 cgcccggagc gtcgacggaa gtccgacctc gatcgcgctg cttgccggag gcaccgccct
      781 ggttaccccg accggtgccg acgaccagaa cgccagcatc atcgatctct cctccgaccg
      841 ggtcctgtcc caggttcctc tcggcgacac cgcgtactct gcggtgactg cgcccgacag
      901 ccacaccgtc tatctcggca ccactcatgg ccgagtgctg gtgttcgacg cctcatcgtc
      961 cagtgttact gacactattg ggctggagct ggcccacagt cgcctcaatc atctcgcgct
     1021 caactccgcg ggcaccctgc tctacgccag ctcatttacc agcggcgcaa tctccgagat
     1081 cgatctcgcc caacaaaagg aagcgcggat cttcatcgtg ggaggcgagc ctcagggcct
     1141 tgcgctcacg ccggacggga gcgagctcta cgtcgccaac gaagccggca atggacacat
     1201 cgacatctat aatgtcgtca cgaacgtgca cgaggcgtcg attccgtcgg gggcgagtac
     1261 cagcgtaggc ggagcgtttg gtctggcgat ctcgcccgat ggctcgaagg tctacgtcgg
     1321 tgtcaccagc aacgagggtc cgggactcat tcagctgctg gataccggca cccgggcaat
     1381 cacccgtacc ttcaatagtt gcgggtctac accacggcgg atcgcattcg gctactcggg
     1441 agggttggcg gtaatcgcgg atgagagcgg gtgcgccacg ttcgtggaat gagagaccca
     1501 cagaagaaaa gccgcagccc acatcgtcgg acgatatgat gaaacatgac gacgaagaga
     1561 caggtgatcg gccctccatc tcagcgctcc tgcttcaact ccgcgcggga gactccgagg
     1621 cgatgaaccg gctctttccg ctggtttacg gagagcttcg gcgattggcc cactggcaac
     1681 tacaacacga gcgaaccgga cataccctcg ataccggcgc cctggtacat gagacctacc
     1741 tcaagatggt ggatcagcct cgagtccact ggcaggaccg ggcgcacttc tttcgagtcg
     1801 cctcctgggc aatgcgccgg atactggtcg attatgcccg tcggtatggt gcccagcggc
     1861 ggggcggcgg agtagcagcc caaacgctgg atgacagggt ggctatcgcc caacaaagtg
     1921 agcaggtgct cgcgcttgac gaggcactgg agaggctggc ggcggtgcac cagcgcttga
     1981 gccaagtggt ggagtgtcgc tggttcggcg gcctgagcga gaccgaaacg gcggaagcgc
     2041 tgggtgtcac cccacgaacg gtgcagcgag attggaggaa ggcgcgggct tggctggttc
     2101 tagagctcgg cggagagccg gtcgccaccc gcgcctctca ccctcatcgg gatatcgaga
     2161 gctgactgcc ggaactgtcc cgggtttgca ccagcacgat accatccctg aatatcctgc
     2221 cgtaccggct tgtagccttc gacgcactga cgtactcgag ccgagcaacc tgatcagcgg
     2281 gaatgccgcg tagcgtctcg attccgccga gaaccttgtt gtccaccgcg acggctggac
     2341 gcagggcctt gaagagcatg agcgagccgg gatcgcgaga ccggagcatc tcaggccgga
     2401 tgtgacggat ggcgtcgtag gtacttccgg cgtcggctcg ggccagctcc ggcgcagtga
     2461 tgacattgag atcctgaccc gtagctccgc tggaggcgca ggcgagcagg agggagagag
     2521 gcgcgatggc gcccgcgagt ttgcctatgg tgaaccgcat ggtgacctcc ggaacgggaa
     2581 aacctcgggt ttgactgcct aaccagtaac gcgcgaaacc agcagcaaac ccgacatgcc
     2641 aggaggagat gatacccggg cttagtcacc gaacggtgag ccgtggcgga aaaaggcccc
     2701 gctgaaccgt aggctcagcg gggcatctct ctcgattatg
//
LOCUS       DASRPQ010001591         2542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2374141, whole genome shotgun sequence.
ACCESSION   DASRPQ010001591 DASRPQ010000000
VERSION     DASRPQ010001591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2374141"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            496..>2542
                     /gene="boxC"
                     /locus_tag="VFD73_18100"
     CDS             496..>2542
                     /gene="boxC"
                     /locus_tag="VFD73_18100"
                     /EC_number="4.1.2.44"
                     /inference="COORDINATES: protein motif:HMM:TIGR03222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_process: GO:0010128 - benzoate catabolic process via
                     CoA ligation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-epoxybenzoyl-CoA dihydrolase"
                     /protein_id="HZI75895.1"
                     /translation="MTSRTAKVPRQRSTSTEPKLSKPMVDFRVDPSRYRHWRLAFDGP
                     VATLTMDVDEGGGLVPGYELKLNSYDLGVDIEFYDAVQRLRFEHPEVRAVVLTSGKEK
                     VFCAGANLRMLAAAPHPWKVNLCTFTNETRNGIEDATANSGQAYLAAVNGSAFGGGYE
                     LALACEHIMIIDDQSSVVSLPKVPLLGVGPGTGGLTRVIGKRHVRRDLADYFATKSEG
                     VGGKIAVQWRLVDEAVPRARWQETVAERAADLAERSARLAGATGIELTPLDKTRTGDE
                     ISYRYVTALLEPGREVAEITVSGPERGAPAEVAGMYEQDAGFWPLAVTRELDDLILDL
                     RTNEPELGTWVLRTCGDAGRVLAYDRLLLDNRGDWLANEVIHYLKRTLKRLDVTSRSL
                     IALIEPGSCFAGSLFELALAADRSFQLSGVFGEADPDAEPAAITIGEMNLGPLPMGNG
                     LTRLETRYLGNDADLAEVEKRAGDALEAGDAEQLGLVTFTPNDVDWGEEIRIAIEERA
                     SFSPDALAGLDANYRFAGPETIETKIFGRLSAWQNWIFNGPHASGLESMYLREITKRV
                     QQYEKRASLIDASHSNAKNSPVSGAIEYMKGHIGEPISVAVLAEGACMSESAFAHLFK
                     HCTGTSPYQFLKQLRLEHARGLLLENHTVSEAARRVGYSSLSHFISEFKRYFGETPRS
                     "
BASE COUNT          475 a          788 c          839 g          440 t
ORIGIN      
        1 tcatcacttc agttacgcgt acgcgctgag cgcgccgcag caggtcacca gcagggccgg
       61 aggcttcacg tgctgtgccc ggtcactctc taacggtgac atggctgcgg tgcagtgtcg
      121 gtagcaggcc gatggctacg cattcccctt agcaacgatc cgccgggtca tcgcaggggc
      181 cgaacccgtt ggcaaagcgg tgaagccgat gccgaccctg agcgcccgcc gcttggcccc
      241 gccaggttca cgcggaaccg tgctccatgt cgatggccag cgtgcgatgt tgatccggtg
      301 aggccatcac cgccgcgcac ccacgcgagc gtcggactat cattgacgaa gatcgatgat
      361 gagcctggac taggcctaat gacaatacaa ccatcgattt aaccatcgat ccggtcaaga
      421 ttgttgctac acgtcctcgg cctctcggcg cttgatcacg agcatcgagg gcacgatgaa
      481 aggcggcgga tgatcatgac cagccgcacc gcaaaggttc cccgtcagcg ctccacctct
      541 actgagccga agctcagcaa gccgatggtt gacttccgtg tcgacccctc gcgctaccgg
      601 cactggcggc tagccttcga cggcccggta gcgacgctaa cgatggatgt cgacgagggc
      661 ggcggcctcg ttcccggata tgagctgaag ctgaactcct atgatctcgg cgtcgacatc
      721 gagttctacg atgcggtgca gcggctgcgg ttcgagcacc ccgaggtccg tgcggtcgtg
      781 ctgaccagcg gcaaggagaa ggtcttctgc gcgggcgcga acctccggat gctggccgcc
      841 gcgccgcatc cgtggaaagt gaacctctgc acgttcacca atgagacccg caacgggatc
      901 gaggacgcga cggcgaactc aggccaggcc tacctggccg cggtcaacgg gagtgccttc
      961 ggcggagggt atgagctggc gctggcctgc gagcacatca tgatcatcga cgaccagtct
     1021 tccgtcgtgt cgctgccgaa ggttcccctg ctcggggtgg ggccggggac cggcgggctg
     1081 acccgggtca tcggcaagcg acacgtccgc cgtgacctgg ctgactactt cgccaccaaa
     1141 tccgaaggcg tcggcggaaa gatagccgtc cagtggcggc ttgtcgacga agccgttccc
     1201 cgggccaggt ggcaggagac agtggccgag cgggccgcgg atctggctga gcgttccgcc
     1261 cgtcttgcag gtgcgacggg catcgagctg acgccgctgg ataagacccg caccggcgat
     1321 gagatctcct accggtacgt gaccgcgctg ctggagcctg ggcgggaggt ggcggagatc
     1381 acggtcagcg gaccggaaag gggcgcacca gcggaggtag ccgggatgta cgagcaggac
     1441 gcgggcttct ggcccctggc ggtcacccga gagctcgatg acctgatcct ggacttgcgc
     1501 accaacgagc cggagctggg tacctgggtg ctgcgcacct gcggcgacgc cgggcgggtg
     1561 ctggcctatg atcggctgct gctggataac cgaggcgact ggctggcgaa cgaggttatc
     1621 cattacctga agcgcacgct caagcgcctg gatgtgacca gccgcagcct gatcgcgctg
     1681 atcgagcccg gcagttgctt tgccggctcc ctgtttgaac tcgcgctggc cgcggaccgg
     1741 tcattccaat tgtccggcgt gttcggggag gccgatccgg acgcggagcc cgcggccatc
     1801 acgatcggcg agatgaacct gggcccgctg ccgatgggca atggcctgac ccggctggag
     1861 acgcgctacc tcggcaatga cgctgacctg gccgaggtgg agaaacgggc aggggatgcg
     1921 ctggaagccg gagacgccga gcaattgggc ctggtcacgt tcaccccgaa cgacgtcgac
     1981 tggggcgaag agatacgtat cgccatcgag gagcgggcta gcttcagccc cgacgccctc
     2041 gccggcctcg atgcgaacta ccgcttcgcc ggtcccgaaa ctatagagac caagatcttc
     2101 ggccggctga gcgcctggca gaactggatc ttcaacggcc cgcacgcctc cgggctggaa
     2161 tcgatgtacc tgcgggagat caccaagcgg gtgcagcaat acgagaaacg cgctagccta
     2221 attgatgctt cgcattcgaa cgccaagaac agtccggttt ctggcgcgat cgagtatatg
     2281 aaaggtcaca taggcgagcc tatttcggtt gccgtgttgg ctgaaggggc gtgtatgagt
     2341 gagtcagcgt tcgctcatct cttcaagcat tgcactggca cgtcgcccta tcagttcctg
     2401 aagcaactgc gccttgaaca tgcacgcggc ctgctcctgg agaatcacac cgtcagcgag
     2461 gcagccagac gggtagggta tagcagcctc tcccacttca tcagtgagtt caagaggtac
     2521 ttcggggaga cgccgcgttc gt
//
LOCUS       DASRPQ010001592         5222 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_810819, whole genome shotgun sequence.
ACCESSION   DASRPQ010001592 DASRPQ010000000
VERSION     DASRPQ010001592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5222
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_810819"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1133
                     /gene="gatB"
                     /locus_tag="VFD73_18105"
     CDS             <1..1133
                     /gene="gatB"
                     /locus_tag="VFD73_18105"
                     /inference="COORDINATES: protein motif:HMM:NF004012.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HZI75896.1"
                     /translation="VTFDSAERGPVRVGITRLHVEEDAGKLLHDRFPGKTAVDLNRAG
                     IPLAEIVSEPDLRSPAEARAYLTTLRQILIYAGASECSVEQGSLRVDANISIRPPGES
                     RLGIKTEVKNMNSFANVERALEAERDRQRALLESGQRVEQVTLLFNAATGRVKPTRSK
                     EESHDYRYFPDPDLPPLVLSPAWIAEQRALLPELPDAKRARLEAAYGIPAYDARVITS
                     ERDLAEYFEAVVRAGADPKVAANWVMGEVMTSYNATGRFPVTAARLASLIQLVAAGTV
                     SHQAAKRVYTELGESGQDPRAVAERLGLLQVSDQAGLTGWVDEVLAAHPEEVNRFRAG
                     EAKLMGFFVGQVMKRSQGKADPKAVQPLLQSRLRLTAGTGAP"
     gene            complement(1134..1607)
                     /locus_tag="VFD73_18110"
     CDS             complement(1134..1607)
                     /locus_tag="VFD73_18110"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HZI75897.1"
                     /translation="MSRHSHQRPQLWQRQFVLPRRSRITSRFGTARVYNGEVQSRHLG
                     TDFAGAIGAPVQAAGDGIVALVADFYLAGRAIYLDHGAGVVTAYFHLSRADVHQGQRV
                     RAGQRIGLVGKSGRVTGPHLHWVARYGTISVDPMSLPGVGNLGTEPERPDSAGPP"
     gene            1596..2066
                     /locus_tag="VFD73_18115"
     CDS             1596..2066
                     /locus_tag="VFD73_18115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75898.1"
                     /translation="MPRHFVTLRDLGLDSYGRDAVRLYERWRDGQNLAWVVAPANGNG
                     GDQAFWFFGSEQTNGNGEGVAALDRDAEDCPIFTSPSAPQVKRFAGDFRAGDSNTGIG
                     LQRKPAKFPLIQWGGSGVDPDGRGRILGLKRRGFDAPERDAARRGECGLRKNQM"
     gene            complement(2090..3058)
                     /locus_tag="VFD73_18120"
     CDS             complement(2090..3058)
                     /locus_tag="VFD73_18120"
                     /inference="COORDINATES: protein motif:HMM:NF013078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc dependent phospholipase C family protein"
                     /protein_id="HZI75899.1"
                     /translation="MAVRRLSLALAGVGMLWLLIPPEAHAWTPGTHIYLGESVLANLP
                     YLPAAVADLLRAFPFDFLYGNIAADSSIAKHYAPLGRHCHYWHVGQEIHDLATSDALR
                     AFGLGYLSHLAADTIAHNYFVPRQLMLTSSTAAVGHSYWETRVEAHLGDAYAKVAKDV
                     ILLDHGPADAHLDRIIAPTIFSVRTNRRLFRGMVHLTETTSWQRASQVAREYSRWPLT
                     DDDVERHLGLSFDFIMELLTESVASARHLDPSGERPLKVAKEMRRRVMREAGRRDTAE
                     LQQAATEQFGLPDRALAYWTKIPKKLPWGAPEGSAPSPRHLVSGGR"
     gene            complement(3058..3534)
                     /locus_tag="VFD73_18125"
     CDS             complement(3058..3534)
                     /locus_tag="VFD73_18125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75900.1"
                     /translation="MTIALVQAAGTAGWVGPTVAISLAVLALAFLGMAVAVGLAALKL
                     AGQVRKVGTLVDGLQDDIARTLKSVRGLTEQGQDIMVLVRHEAGAFAQTARRLRRKTV
                     RAADRIEVKMEELETLYDVVHDEVEGAALDMAAALRSVRRGNGMLGRVRRLLVPSR"
     gene            3702..4967
                     /gene="murA"
                     /locus_tag="VFD73_18130"
     CDS             3702..4967
                     /gene="murA"
                     /locus_tag="VFD73_18130"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HZI75901.1"
                     /translation="MRGGRPLKGTVRPAGNKNAALPILAATVLADGPVDLENIPRIRD
                     VETMLALLMDLGATAEWTGPNVLRVDTRSLKPKPLDPGLCAKIRASILLAGPLLARFG
                     SVTLPPPGGDVIGRRRVDTHFLALEHLGASVMVGDRYELESKGLRGDDIFLDEPSVTG
                     TENALMAAVMAKGRTVLRNAACEPHVQDLARALVAMGAEISGIGSNIYTIEGGRPLKG
                     AAYAIGPDHIEIGSFIGLAAVTNGDVTIEPVRSEDLRSTILGFERLGIRPRVEGNRLS
                     VSAGQERRIRPDLGGHVPKLEDGPWPAFPADVMSTTIVTATQCSGMLLVFEKMFESRL
                     FFVDKLIGMGARIVLCDPHRAVISGPSPLKGGTVESPDIRAGMAMLLAALAADGASTI
                     HNVGQIERGYERIDERLRALGAEIERVDG"
     gene            4960..>5222
                     /locus_tag="VFD73_18135"
     CDS             4960..>5222
                     /locus_tag="VFD73_18135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75902.1"
                     /translation="MGSKQGSGAAGQRGSQADAASISHHRLAILTEEPVAGSIPRYEI
                     PHWRKRFAVVAGITSRGGEPGRGFDLGLWTEQPVGEVMSRWLS"
BASE COUNT          966 a         1660 c         1696 g          900 t
ORIGIN      
        1 cggtgacctt cgactccgcc gagcgggggc cggtgcgcgt cgggattacc cgactgcatg
       61 tagaggaaga cgccggcaag ctgctgcacg accgcttccc cggaaaaacc gcggtggatc
      121 tcaatcgggc cggcattccg ctggcggaaa tcgtcagcga gccggacctg cgcagtccag
      181 cggaggcgcg ggcctatctg acaacgctcc ggcagattct gatttacgcc ggagccagcg
      241 agtgcagcgt ggagcaggga agcctgcggg tcgacgcgaa catctccatc agacccccag
      301 gcgagtcgcg cctcggcatc aaaaccgagg tcaagaacat gaactccttt gccaatgtcg
      361 agcgggcatt ggaggcggag cgcgaccgcc aacgagcgct gctggaatca gggcagcggg
      421 tggagcaggt cacgttgctg ttcaacgctg ccaccggaag ggtgaaaccc acccggtcca
      481 aggaagagag ccacgactat cgctatttcc ccgatcccga tcttccaccg ctggtattat
      541 caccggcctg gatcgcagaa cagcgggcgc ttcttccaga gctccccgat gccaaacggg
      601 caaggctgga agcggcatac gggattccgg cctatgacgc tcgggtgatc accagcgaaa
      661 gagatctggc cgagtacttc gaagcggtgg tccgagccgg tgctgatccg aaggtggcgg
      721 ccaattgggt gatgggagag gtcatgacgt cctataacgc aaccggccgc tttccggtca
      781 ccgccgctcg gcttgcgagc ctgatccagc tggtcgccgc gggaactgtg agccaccagg
      841 ctgcgaaacg ggtgtatacg gagttggggg agtcaggcca agatccgcga gccgtggcgg
      901 aacgtctagg cttgcttcag gtcagcgatc aagctgggtt gaccgggtgg gtagatgagg
      961 ttctggccgc gcaccccgaa gaggtcaatc gctttcgagc aggggaggcc aagctgatgg
     1021 ggttctttgt cggtcaggtg atgaagcgca gccagggaaa agccgacccc aaggccgtgc
     1081 aaccgctgct tcaatcgagg ctgcgactta ccgcgggaac cggtgcacct taactagggc
     1141 ggaccggccg agtctgggcg ttcgggttca gtccccaagt tgcccacccc cggtagactc
     1201 atcggatcga ctgagatcgt cccgtacctt gccacccaat ggagatgcgg gccggtaacg
     1261 cggccgcttt ttccgaccag cccgatacgt tgtccggcgc ggactcgttg accctgatgc
     1321 acgtccgccc tgctcagatg gaagtaggcg gtcaccactc ccgcaccatg atctagatag
     1381 atcgctcgtc ccgccagata gaaatcagca accagggcaa cgattccgtc gcctgcagcc
     1441 tgcaccggtg ctccaatggc tcccgcaaag tcggtcccga gatggcggct ctggacctct
     1501 ccgttgtata ccctcgcggt gccaaaccgg ctggtaatcc tgctgcgcct cggcaggaca
     1561 aattgccgct gccacaactg gggccgctga tgtgaatgcc gcgacacttc gtgactttgc
     1621 gcgatctcgg actggattct tatggccgag atgctgtccg gctttacgaa cgctggaggg
     1681 acggtcagaa cctcgcgtgg gtagtcgccc cggcgaacgg gaacggaggc gaccaggctt
     1741 tctggttctt cggctcggag cagacgaatg gaaacggcga gggagtcgcc gctctcgacc
     1801 gggacgccga ggattgcccg atattcacct ccccgagcgc gccgcaggtg aagcggttcg
     1861 ccggcgactt ccgcgccggt gacagtaaca ccggaatcgg tctccagcgt aagccagcca
     1921 aatttcccct catccagtgg ggcgggagtg gagtggatcc ggacggacgc ggcagaatcc
     1981 tgggccttaa gcggcgcggg ttcgatgctc cagagcgcga cgcagctcgc cgcggtgagt
     2041 gcggtcttcg caagaaccag atgtgatgcc ggtggcgcgt gcgacgaaat cagcggccgc
     2101 cgctcacgag gtgccgggga gagggagcgc tcccctccgg agcaccccag gggagtttct
     2161 tggggatctt ggtccagtag gcaagagccc gatcgggcag cccgaattgt tcggtcgcag
     2221 cttgttgcag ctcggcggtg tcgcgccggc ccgcctcacg catcacccgc cgccgcatct
     2281 ccttcgctac cttgagcggc cgctccccgg aaggatccag atgcctggct gatgcaaccg
     2341 attcggtgag aagctccatg atgaaatcga aggagagccc gaggtgccgc tcgacgtcat
     2401 cgtcagtgag gggccaccgg ctgtattccc gcgccacctg actggctcgc tgccagctgg
     2461 tggtctcggt caggtgcacc atgcctcgaa acagccgccg gttggtgcgg acgctgaaga
     2521 tggtaggagc aatgatgcga tccaggtggg catcagctgg gccatgatcc agcaggatca
     2581 catccttggc caccttggca tacgcatcgc ccaggtgcgc ctcgaccctc gtttcccagt
     2641 acgaatggcc gacggccgcc gtgctgctgg tcagcatgag ctggcggggg acgaaataat
     2701 tgtgggcgat ggtatcggcg gcgaggtggc tgaggtatcc cagtccgaac gcacgaagag
     2761 cgtcgctggt cgccaggtca tgaatctcct gtccgacatg ccagtaatgg cagtggcgac
     2821 cgagtggggc gtaatgcttc gcgatcgacg agtctgccgc gatgttgccg tacagaaaat
     2881 caaacgggaa cgctcgcagc agatcggcca ctgccgcggg gagatagggc agattggcga
     2941 ggaccgactc accaagatag atgtgggtgc ctggagtcca ggcgtgtgcc tcaggaggga
     3001 tcagcaacca caacattccc acgcccgcca gcgcgagcga gagacggcga actgccatca
     3061 acggctcgga acgagcaagc gccgcactcg gcccagcata ccgttgccgc gtcgcaccga
     3121 acgcagcgcc gcggccatgt ccagcgccgc gccttcgact tcgtcgtgga ccacgtcgta
     3181 gagcgtttcc agctcctcca tcttcacctc gatacggtcg gcggcgcgaa ccgttttgcg
     3241 gcggagccgc cgtgcggtct gggcaaaggc cccagcctcg tgccgcacta ataccatgat
     3301 gtcctggccc tgttcggtga gacctcgcac cgatttgagc gtgcgggcga tatcgtcctg
     3361 caagccgtcc accagggtgc cgactttgcg cacctgaccg gccagcttca gcgcggccag
     3421 gcccactgcg actgccatgc cgaggaaggc gagggcaagc accgccagtg agatcgctac
     3481 cgtcggtcca acccaccccg cggtgccggc ggcctggacc aatgcgattg tcatcatatg
     3541 ccagtcacct ccatggaagg cttgtcaccg ggcgccgcag cgagcccggt tccccgcgca
     3601 cacgctaata caaagccact gcggcagcat cgcaaccccc tcgctccgct tgacgcgatt
     3661 ccctggtggc ctcagctttg gccatgcctc cacgatttct cgtgcgcggc ggtcgcccgc
     3721 tgaagggaac cgtccgtcca gccggaaaca aaaacgccgc gcttccgatc cttgccgcga
     3781 cggtgctcgc cgacggcccc gtcgatctgg aaaacattcc gcggattcgg gacgtcgaga
     3841 ccatgctcgc cctgctgatg gacctgggcg cgaccgctga gtggaccgga cccaacgtgc
     3901 tccgggtgga caccagaagt ttaaaaccga aaccgctcga ccccggactc tgcgccaaga
     3961 tccgggcttc cattcttctg gccggcccgc tgctcgcccg cttcggcagc gtcacgctcc
     4021 ccccaccggg tggtgacgtc attggccggc ggcgggtgga tacccacttc ctggcgctgg
     4081 agcatctcgg cgcgtcggtg atggtcggtg atcgctatga gctcgagtcg aagggcctgc
     4141 gaggcgacga catcttcctg gacgagccca gtgtcaccgg aaccgagaac gcgctgatgg
     4201 cggcagtcat ggccaaagga cgtacggtgc tgcgtaacgc cgcgtgcgag ccgcacgttc
     4261 aggacctcgc ccgcgcgctg gtcgccatgg gcgcagaaat ttccggcatc ggctcgaaca
     4321 tctataccat tgaaggcggc agacccctca agggagccgc ctatgcgatt ggtccggatc
     4381 acatcgagat cggaagcttc atcggactcg ccgccgtcac caacggcgat gtgaccatcg
     4441 agccggtccg gtccgaggat ctccggagca caattcttgg attcgagcgg ctcgggatcc
     4501 gtccccgggt cgaaggcaat cggctgagcg tgagcgccgg tcaggaacgc cggattcgtc
     4561 ccgacctcgg cgggcatgtg cccaagctcg aggacggccc gtggcccgcg ttcccggccg
     4621 acgtcatgtc gaccaccatc gtgaccgcca cccagtgctc cggaatgctc ttggtcttcg
     4681 agaagatgtt cgagtcccgg ctcttcttcg tggacaagct gattgggatg ggtgcccgca
     4741 tcgttctctg tgatcctcac cgcgcggtaa tctccggccc ctcacccttg aaaggtggaa
     4801 cggtcgaatc ccctgatatc cgggcaggca tggcgatgct cctggccgcc ctcgctgccg
     4861 acggtgccag taccatccac aacgtgggcc agatcgagcg cggttacgaa cggatcgacg
     4921 agcggctgcg tgccctgggt gcggagatcg agcgggtgga tgggtagcaa gcagggcagc
     4981 ggggcagcgg ggcagcgggg cagccaggct gatgcagcaa gcatctcaca ccatcgatta
     5041 gcgatcctta ccgaggagcc ggttgccggc tccatccccc gctacgaaat cccgcattgg
     5101 agaaaacgct tcgcggtggt cgccggcatt acgagccgag gcggtgagcc gggtcggggg
     5161 tttgatctgg gcctctggac cgagcagccg gtaggcgagg tcatgagccg atggctctcg
     5221 tt
//
LOCUS       DASRPQ010001593         1978 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1120560, whole genome shotgun sequence.
ACCESSION   DASRPQ010001593 DASRPQ010000000
VERSION     DASRPQ010001593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1978
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1120560"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1951
                     /gene="topA"
                     /locus_tag="VFD73_18140"
     CDS             <1..1951
                     /gene="topA"
                     /locus_tag="VFD73_18140"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HZI75903.1"
                     /translation="HRILFHEITKEAIQEALRDPGEIDDRKVDAQQARRILDRLVGYK
                     ASPILWHSIKTGLSAGRVQTVALRLIVEREREIRAFKPEEYWSIEALCAKDNQTFEAA
                     LSKVGGHKPQLHTESDARAVVDAVRTLPFVVTKVEKRHRKKNPAAPFTTSTLQQEAAK
                     KLGFSSRRTMRAAQDLYEGIDVGSEGAVGLITYMRTDSPQVSETAITSVRSFIKKNYA
                     KTYLPAAANVYAPKKNARVQGAHEAIRPTDVARRPEDVQQYLDSDQFRLYQLIWQRFV
                     ASQMTPAVYDMTVVEFDLGEYLFRATGSVLIFDGYHVLYTEGREKEEGKTMDDLPPIP
                     PLVVGDRVEVREITPSQHFTEPPPRYSEASLVKELERLGIGRPSTYSAIISTLSAREY
                     VKVDQRRFFPTELGETVEKIMVSKFPEIFNVEFTSEMEEELDRIEDGELKWQRVLKDF
                     YGPFVKALDAVDMKALVADAHGLNPEELAKERCPKCGSPIELRTGRFGPYLACIKYKD
                     TCDYVKSLKKVKVPDRPSDEKCHLCGSPMVIKTGRFGEFLACTTYPDCKGTRSIPMGL
                     KCPKCDTGDLTERRTKRGKSFWGCLRYPECDFSTWNRPVPETCPACGWLGMEKKISKA
                     EGETRTCLKCRHRLTVAEPEEVALG"
BASE COUNT          395 a          615 c          639 g          329 t
ORIGIN      
        1 ccaccgcatt ctcttccacg agatcaccaa agaagccatt caggaggcgc tccgcgatcc
       61 cggtgaaatc gacgaccgga aggtggatgc gcagcaggct cgccgaattc tcgaccgcct
      121 ggtgggctac aaggccagcc cgattctctg gcatagcatc aagaccggcc tctcagccgg
      181 ccgagtgcag accgtggcgc tgcgattgat tgtggagcgt gagcgcgaga tccgcgcgtt
      241 caaaccggag gagtactgga gcatcgaggc gctctgcgcc aaggacaacc agaccttcga
      301 ggccgccctc agcaaagtgg gtggccacaa gccgcagctg cataccgaga gtgacgcgcg
      361 cgcggtggtc gacgccgtcc gcacgctgcc gttcgtggtt accaaggtcg agaagcgcca
      421 ccggaagaag aaccctgcgg cgccgttcac caccagcacc ttgcagcagg aggcggccaa
      481 gaagctgggc ttctcctccc gccggacgat gcgggcggcc caggatctct acgagggtat
      541 cgacgtaggg tcagagggag cggtcggtct catcacctac atgcgaaccg attctcctca
      601 ggtgtcggag accgcgatca cctcggtccg gagcttcatc aagaagaact acgccaagac
      661 gtacctgcct gccgcagcca acgtgtacgc tccgaagaag aatgcccggg tgcagggagc
      721 gcacgaggct atccggccaa ccgatgtggc gcgccgcccc gaagacgttc agcagtacct
      781 cgactccgat cagttccggc tgtaccagct catctggcag cggttcgttg cgtcgcagat
      841 gacgccggcg gtctatgaca tgacggtggt ggagttcgat ctgggcgagt acctcttccg
      901 cgccaccggc tcggtcctga tcttcgacgg ctatcacgtg ctctacaccg agggccggga
      961 aaaagaggaa ggcaagacca tggacgacct gccgcccatc ccgccgctgg tggtgggaga
     1021 ccgggtggag gtccgcgaga tcacgccttc gcagcatttc accgagccgc cgccgcgcta
     1081 ctccgaggcc agcctggtga aggagctgga gcgtctcggt atcggccgtc cgtccaccta
     1141 cagcgccatc atctccacgc tgtccgcccg ggaatacgtc aaggtggatc agcgccgctt
     1201 cttcccaacc gagctgggcg aaaccgtcga gaagatcatg gtgagcaagt tccccgagat
     1261 cttcaacgtc gagttcacct cggaaatgga ggaggagctg gaccggatcg aggatggcga
     1321 gctgaagtgg cagcgggtgc tgaaggactt ctacggtccc ttcgtcaagg cactcgacgc
     1381 ggtggacatg aaggcgctgg tggccgacgc gcatggtctc aaccccgagg agctggccaa
     1441 ggagcgctgt cccaagtgcg gctcgccgat cgagctccgc accgggaggt tcggccccta
     1501 tctcgcctgc atcaagtaca aggacacctg cgactatgtg aagtcgctca agaaggtcaa
     1561 ggtgcccgac cgtcccagcg acgaaaagtg ccacctctgc ggctcaccga tggtgatcaa
     1621 gacggggcgg ttcggcgagt tcctggcctg caccacgtac cccgattgca agggcacccg
     1681 ctcgattccg atgggactca agtgtcccaa gtgcgacacg ggcgacctga cggagcggcg
     1741 gaccaagcgc gggaaatcgt tctggggttg tctccgctat cctgagtgcg acttctccac
     1801 ctggaatcgt ccggtgcccg agacctgtcc cgcctgcgga tggttgggta tggagaagaa
     1861 gatcagcaag gctgagggcg agaccaggac ctgtctcaag tgccgtcatc gccttaccgt
     1921 cgccgagccg gaagaggtcg cgttggggtg aaggtcaccg tagtaggtgg cgggctgg
//
LOCUS       DASRPQ010001594         1407 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1120631, whole genome shotgun sequence.
ACCESSION   DASRPQ010001594 DASRPQ010000000
VERSION     DASRPQ010001594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1407
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1120631"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..638
                     /locus_tag="VFD73_18145"
     CDS             <1..638
                     /locus_tag="VFD73_18145"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZI75904.1"
                     /translation="PAVRDDPHDPGDGTALRSCGNGGKLAELVRDGATASVGVDVSGN
                     FLSVPMPGLELIQGDLNELDAVPGLGGRTFDRILFLQSFGYATDPVRTLQAARAMLAD
                     DGFILLTKTQPIRYAVEQAEQNETSLGEEYLSTARFSYLSGWNRQITLTKRRHTIADL
                     INVFSAAGLWIETAIEPQLSEDARRRYPHKQAWMNKYLGILVFKLRPHPGQ"
     gene            809..>1407
                     /locus_tag="VFD73_18150"
     CDS             809..>1407
                     /locus_tag="VFD73_18150"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HZI75905.1"
                     /translation="MPTRIPVTEELTRRLVSAQFPQWADLPVEPMANGGWDNWTFRLG
                     TEMVVRLPSASEYAQAVEKEHRWLPALAAQLPLPIPVPLAKGKPSAEYPHSWSIYEWL
                     DGVTATADRIASHVEFARDLADFLAALQSIEAAEGPRPGIHNWFRGGTLRTYDKDTQH
                     ALSKLAGHVDVELAREIWTRALNATWNGLDRRFHGDVAEG"
BASE COUNT          271 a          466 c          432 g          238 t
ORIGIN      
        1 accctgcggt acgcgatgat ccacatgatc caggagacgg cacggcattg cggtcatgcg
       61 gcaacggagg caagctcgct gagctggttc gagacggtgc gactgcctcc gtcggtgtcg
      121 atgtcagtgg caacttcctc agtgtcccaa tgcctggctt ggaactgatc caaggcgatc
      181 tcaatgagct ggatgccgtg ccggggcttg gaggccgcac gttcgaccgg atcttgttcc
      241 tgcagtcttt cggctacgcg acggatccag tccgcactct gcaggcagcg cgcgcgatgc
      301 tggccgacga tggattcatc ctgctgacca agacgcagcc gattcgatac gccgtcgaac
      361 aggccgaaca gaacgagacc tccttgggcg aggagtacct ctccaccgcg aggttctcct
      421 acctcagcgg ttggaaccgt cagatcaccc tcaccaagcg tcgccatacc atcgccgacc
      481 tgatcaacgt gttcagtgcc gcagggctgt ggatcgagac cgcgatcgag cctcaactgt
      541 ccgaggacgc cagacgccgc tatccgcaca agcaggcctg gatgaacaag tacctcggca
      601 tcctggtctt caagctccgg ccccatcccg gccagtagca gagatcctga gtggtggctg
      661 cgggctagcc gatgctcgga acatccggac atgctgcgtt gaggggagtc cgcacctgtc
      721 ccatccagga atacccggtt gccgaatcct gacgaccgcg gaagcatccg gtcgcatgcc
      781 tgctaacgac gagtttgatc tgggtcccgt gccgacccgc atacccgtca ccgaagagct
      841 gacgcggcgt ctggtgtctg cacagtttcc gcagtgggcc gatcttccgg tcgaaccgat
      901 ggccaacggt ggctgggaca actggacctt ccgcttgggc accgaaatgg tggtgcgcct
      961 gcccagcgcc tcggagtacg cccaggcggt cgagaaggaa caccgctggc tcccggcgct
     1021 ggctgcccaa ctgccgctgc ccatccccgt cccgttggcg aaaggcaagc cgagcgcgga
     1081 atacccacac tcatggtcga tctacgagtg gctagacggc gtgaccgcga ctgcggaccg
     1141 catcgccagc cacgtcgagt tcgcccgcga cctggccgac ttcctggccg ccctgcaaag
     1201 catcgaggcc gctgaaggtc cccggccagg aattcacaac tggttccggg gcggcaccct
     1261 gcgcacctac gacaaggaca cccaacacgc gctaagcaaa ttggccggcc acgtcgatgt
     1321 cgagctggct cgcgagatct ggacgagagc actgaacgca acgtggaacg gcctggaccg
     1381 ccggttccac ggagacgtcg ccgaggg
//
LOCUS       DASRPQ010001595         1021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_196556, whole genome shotgun sequence.
ACCESSION   DASRPQ010001595 DASRPQ010000000
VERSION     DASRPQ010001595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196556"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            478..687
                     /locus_tag="VFD73_18155"
     CDS             478..687
                     /locus_tag="VFD73_18155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75906.1"
                     /translation="MQPVQGIAALVLAHLDSGFLLAGFDSLPQVIVDDPKLWDLGDLA
                     DLLLVDPGDLLPCPRVLHIGGAIPL"
BASE COUNT          165 a          314 c          336 g          206 t
ORIGIN      
        1 acgagctgcc gccttccatc cgcacagagg cgatcgctac gacccgggag ttgctggccg
       61 atccgggttt cgagcaccgc atcgccggac gctttccact tgatcgcatt gtcgacgccc
      121 atgaggcggt cgagagtggc aaactgatcg gtaatgtcgt cgtgacactc gattgaaagt
      181 atcgtcgagc ccacgctgag ctgttgctgc agatgagcga ggccgccgtc ttagccgcag
      241 cgttgatctc ctcctggaag gcgcggacga actcggcgac cagctcgggg ccatgagctt
      301 gccccggagg ccgcccagga cgcgggtctc gatccgctgc cgggtgatag tcttgtcgtt
      361 gccgcaggtg cccctgggac gccgggtggc gcagccatag cggtccttgc cgacgaccgt
      421 gtaacggcca ccgcactggc cgcagaccag gagttcgctc agcaggaatt tgcgccggtg
      481 cagccggtcc agggtattgc cgccctcgtc cttgcccatc tcgattcggg cttccttctg
      541 gcgggctttg actctctgcc acaggtcatc gtcgatgatc cgaagctctg ggaccttggc
      601 gatctcgcgg acctcctgct ggttgacccg ggcgaccttc ttccctgtcc gagggttctt
      661 cacataggcg gtgcgattcc actctagacg gccgatatag acagagttgt ttaggaggcc
      721 ggtgccgcga tcaacctggc cgcggatggt ggtgtcccgc cattttcgcc ctgacgggcc
      781 gggggaactc cgcgacttgg gccggtcggt gtttggctat ggctggaaga catccctggc
      841 gcgggccatt gggatgagta ggagaatgaa tgagtattat gggacgggcg aggggcccat
      901 accggctgag cgggccagga ccattcgcgc cctagccgat attgggcccg ttggaaacat
      961 cattcgtgca gccatcaggg ccgctgcacc gtcgcggcga tcgcaatgca gctgctgccg
     1021 a
//
LOCUS       DASRPQ010001596         2647 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4254495, whole genome shotgun sequence.
ACCESSION   DASRPQ010001596 DASRPQ010000000
VERSION     DASRPQ010001596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2647
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4254495"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1208
                     /locus_tag="VFD73_18160"
     CDS             <1..1208
                     /locus_tag="VFD73_18160"
                     /inference="COORDINATES: protein motif:HMM:NF015148.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="OPT/YSL family transporter"
                     /protein_id="HZI75907.1"
                     /translation="DLPIWVTLVGAVVLALALTVVPQLAVNLLGAILIIIFGFFFVVV
                     SSRITGEIGVSANPISGMTIAALIGTTTIFLLIGWTGIDHRVGAISIAGVIAVAAGNA
                     GATSQDLKTGFLVGSTPKRQQIAIMVGAITSALAIGWTLTLLNSTYTNVVPERHPGVS
                     LQASAPGASDRSVTSLGERMTHAGKQWDVVRVNIPTSGVQPGKYLLDPGTHEVAYLVD
                     PGIGGRIREIDGKPVTKLDSPKATIMALVTDGILTQKLPWGLVLIGVFLTIAIELMGL
                     QSLPIAVGVYLPISTSSAMFAGGAVRWLVERRSRGTERTLAEVESGPGVLFSSGLIAG
                     GALAGVAIAGVAAALVNRAEAAQVPAADYLAHVVGLQNVVGGFATSDLAALLMFAALG
                     AVLYTIAKR"
     gene            1208..1633
                     /locus_tag="VFD73_18165"
     CDS             1208..1633
                     /locus_tag="VFD73_18165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75908.1"
                     /translation="MPPSGTVSPAISARIIHAALVLGIVLFYAVAWFVGTKTSMPVSA
                     VPDRRLLYVGLFVVSAALFGAAMYSAGRLSRPEAGTQQDEWWRSNLGRAIVIWALVEA
                     PTVLGTVAYLLTHDFRALIATLTGLLLFVNYRPGRLEEG"
     gene            1630..2526
                     /locus_tag="VFD73_18170"
     CDS             1630..2526
                     /locus_tag="VFD73_18170"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZI75909.1"
                     /translation="MIRVVSLVPAATEIVAALGGSNLLVGISHECDYPATVQHLPRLT
                     SSSIDPGTNSKAIDAEVRALRDAGRPVIAVDGGMIRRLAPDLILTQDLCEVCAVSDGE
                     VHRLSSAMPTSPQVLSLTARNLEGIWSDICNVARVLDLRDRAEELISQLEARLELLRK
                     NRPATNPRVLCLEWLDPPYLAGHWVPDLVAAAGGHDVGARSGSHSSRRSWAELTTLRP
                     DCLLVMLCGFGVDRARVELENLESADALELFRRIPTWIVDANSYTSRAGPRVVEGAEQ
                     IWSVFAGHAMPGIERWEPAAVC"
BASE COUNT          430 a          807 c          862 g          548 t
ORIGIN      
        1 tcgatctacc catctgggtc acgctggtcg gcgcggtggt tctggcgctt gctctgaccg
       61 tagtgcctca gctcgccgtc aatctgctgg gagccattct catcatcatc ttcgggttct
      121 tcttcgtggt ggtctcctcc cggatcacgg gagagatcgg ggtcagcgcc aatccgatct
      181 ccgggatgac catcgctgcc ctcatcggaa ccacgaccat cttcctcctt atcggctgga
      241 ccgggatcga ccatcgtgtg ggcgccattt cgatcgcggg ggtaatcgcg gttgcggcag
      301 gtaacgcggg cgccaccagc caggacctga agaccggatt cctggtgggg tccaccccaa
      361 agcgtcagca gattgccatc atggtgggag cgatcacctc cgcgctggcg attggctgga
      421 ccctcacgct cctcaatagc acctatacca acgtggttcc cgagcgtcac ccgggtgtgt
      481 cgctgcaggc gtccgcgccc ggtgccagcg atcgctcagt gaccagtttg ggtgagcgga
      541 tgacccacgc cggcaaacag tgggacgttg tccgggtgaa cattccgacc agtggagtgc
      601 aacccgggaa atatctgctg gatcccggca ctcacgaggt tgcgtacctg gtcgacccgg
      661 gaattggggg cagaattcgg gaaatcgacg gcaagccggt caccaaactc gattcaccca
      721 aggccacgat tatggccctg gtcacggacg gcattctgac ccagaagctc ccctggggat
      781 tggtgcttat cggcgtcttc ctcaccatcg ctatcgagct gatggggcta caatcgctcc
      841 ccatcgcggt cggggtgtac ctgccgatct ccacctcctc cgccatgttc gccggaggag
      901 cggttcgctg gctggtcgag cgccgaagcc ggggcaccga gcgaactctg gccgaggtgg
      961 agtccgggcc gggagtgctc ttctcgagtg gtctcattgc cggcggagcg ctcgccggtg
     1021 tcgccatcgc cggggtggcc gcagccctgg tgaaccgggc tgaagcggca caggtacctg
     1081 cggccgacta cctggctcat gtggtaggtc ttcagaatgt ggtcggcggc ttcgcgacga
     1141 gtgatctcgc cgcgctgctg atgttcgcgg ccttgggagc ggtgctctac acgatcgcca
     1201 agcgatagtg ccgccctccg ggacggtatc tcccgccatc agcgcgcgca tcattcatgc
     1261 ggcgctggtg cttggtatcg tgctgttcta cgctgtggcc tggttcgttg gaaccaagac
     1321 ctcgatgccg gtttcagccg tccccgatcg acgattgctc tacgtggggt tgtttgtcgt
     1381 gagcgccgca ctgttcgggg ccgcgatgta cagtgccggg cggctcagcc gaccggaggc
     1441 gggaacccag caggacgagt ggtggcggag caatcttggg cgggcgatcg tgatctgggc
     1501 tttggtcgaa gccccgaccg tgctggggac cgtcgcgtat ttactgactc acgattttcg
     1561 agctttgatc gccactctga cgggattgct tttgttcgtg aattatcggc cagggcgcct
     1621 ggaggaagga tgatccgggt tgtgtccctg gttcccgccg caaccgagat cgttgctgcg
     1681 ctgggaggct caaaccttct ggtggggatc tcgcatgaat gcgactatcc ggcgacggtc
     1741 cagcatctac cccggctcac cagcagctcg atcgatcccg ggaccaacag caaagccatc
     1801 gatgccgagg ttcgcgcctt gcgcgatgcc gggcgtccgg taatcgcggt cgacggtggg
     1861 atgatccggc ggctcgctcc cgacctgatc ctcactcagg atctctgtga ggtgtgcgcc
     1921 gtgagtgatg gcgaggtaca tcgcctctcc agcgcaatgc cgacatctcc ccaggtgctc
     1981 tctctcactg cccgtaacct agagggcatc tggagtgaca tatgcaatgt cgcccgggtc
     2041 ctcgatctca gggatcgggc agaggagctg atctcgcagc tggaagctcg gctggagctc
     2101 ctccggaaga accggccggc caccaaccca cgagtactct gcctcgaatg gctggacccg
     2161 ccatatctcg ctggccactg ggttcccgac ttggttgcgg ctgcaggcgg ccacgatgtc
     2221 ggggctcgat cgggcagtca ctccagccgg cgctcctggg ccgagctcac gacattgcgg
     2281 cccgattgcc tgctggtgat gctgtgcggc tttggcgtgg accgagcgcg ggtggagctg
     2341 gagaacctcg aatctgcgga tgcgttggag ctttttcgcc ggattcccac ctggattgtg
     2401 gatgcaaact cctacacctc acgggccggg ccgcgggtgg ttgaaggtgc agaacagata
     2461 tggtcggtgt tcgctggaca cgcgatgcca ggaatagagc ggtgggagcc tgcagcggta
     2521 tgctgacgat cgtagacggg tctaccggag aacgcgtgct ccaggcgcga accctctttc
     2581 aggaatacgc cgcctccatt ggcgtggatc tctgttttca gggctttcaa gaggagctgg
     2641 ccacgct
//
LOCUS       DASRPQ010001597         1117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1459990, whole genome shotgun sequence.
ACCESSION   DASRPQ010001597 DASRPQ010000000
VERSION     DASRPQ010001597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1459990"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..825)
                     /locus_tag="VFD73_18175"
     CDS             complement(<1..825)
                     /locus_tag="VFD73_18175"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HZI75910.1"
                     /translation="MRWWAIAMTGIEASTSPPPLPRWFGPRASPDDPAVSALIARVAR
                     GAGWADIGGGFNLNVRIDAEPPVVLRVHRPWVRRGRVAGLRRLRERLQRTQVRVARPI
                     RISGCDLLRVADRWAEIEEFIGHVQPPAGEDSYVRLFEELGSLHAALKAVWEPSPPEP
                     LDDHRTLGQLRYSVGFTRRRLGPRSEPVVRRMRQLTGQLSQLRKEVDLPCAPIHVDYK
                     WGNAGELSDGSWATFDLDFARVRERLYDIAGSLHHAAQSSAFQGGLVGLPVTDLLEP"
     gene            complement(913..>1117)
                     /locus_tag="VFD73_18180"
     CDS             complement(913..>1117)
                     /locus_tag="VFD73_18180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75911.1"
                     /translation="ASIEGAPPISAEPRGWGISVSNSGDIHLSAVNARCHVVMYALRA
                     GVGGQSALAFGGREFWDTPLPRW"
BASE COUNT          187 a          375 c          374 g          181 t
ORIGIN      
        1 cggctcgagc aagtcggtga cggggagccc caccaggccg ccttggaatg cgctgctctg
       61 tgcggcgtgg tgcaggctgc ccgcgatgtc gtacagccgc tccctgaccc tcgcgaaatc
      121 caggtcgaag gtggcccatg agccgtctga cagttctccc gcgttgcccc atttgtagtc
      181 cacatgaatc ggagcgcagg gcaggtcgac ctccttccgg agctgggaga gctggccagt
      241 cagctggcgc atccgacgca cgaccggctc gctgcggggt ccgagcctgc ggcgtgtgaa
      301 gccgaccgag taacgcagtt gcccgagtgt tctgtggtcg tcgaggggtt cgggcggact
      361 gggctcccag actgctttga gcgcagcgtg caggcttccg agctcctcga ataggcggac
      421 ataggagtcc tcgcctgccg gtggctggac gtgaccgatg aactcctcaa tctcagccca
      481 acgatcagcg accctgagca ggtcgcagcc ggaaatccga atcggccggg cgacgcggac
      541 ttgcgtccgc tggagccgct cccgcaggcg ccgcagtccc gctacccggc cgcggcggac
      601 ccagggccta tgaacccgga ggacaaccgg cggctcagcg tctatccgca cgttgaggtt
      661 gaacccaccg ccgatgtctg cccatccggc ccctcgcgcg acgcgggcga tcagggccga
      721 gacggccggg tcatctgggc tggctctagg tccgaaccag cgcggcaagg gagggggaga
      781 ggtcgaagcc tcgattccgg tcatggcaat ggcccaccag cgcacccgag gaagggtccg
      841 ccggcgagca tggcgcaatc ttgccgcgac gctatgacgg tcggcatccc gcagcccttt
      901 cagctcgcct gatcaccatc gtggaagcgg cgtgtcccag aactcgcggc ccccgaatgc
      961 caaggctgat tgtcctccaa cgccggctcg cagggcgtac ataacgacgt gacaccgggc
     1021 attgacggcg ctcaggtgaa tgtccccaga gttgctcact gaaattcccc acccgcgtgg
     1081 ctccgctgag atgggcgggg ctccttcgat gctggcg
//
LOCUS       DASRPQ010001598         2539 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1780530, whole genome shotgun sequence.
ACCESSION   DASRPQ010001598 DASRPQ010000000
VERSION     DASRPQ010001598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2539
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1780530"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..312)
                     /locus_tag="VFD73_18185"
     CDS             complement(<1..312)
                     /locus_tag="VFD73_18185"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI75912.1"
                     /translation="MNPSGTVLVVDDERTLARAIKAFLKESGYEAEVASDGESAVGML
                     QSLRPDVVFADVRLPGMSGIDLLKSLRKRQNTIPVIVMTGHGDVPLAVEAMKYGATDF
                     LE"
     gene            complement(309..1838)
                     /locus_tag="VFD73_18190"
     CDS             complement(309..1838)
                     /locus_tag="VFD73_18190"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI75913.1"
                     /translation="MTFQRKLLLGFSLVVVPALAIVTAGAIRSNVLERRALEALGASM
                     ARTRTYAELETAMFDQSEVIWRYLSGLDPDARKEFELTRQVVDYWQQRWAAELRPDEQ
                     ELAIGVQQIQSQIQATADSIFRLYDSGQHEAAFRAAQRELKGRLLPALTQLNRQIYRQ
                     ARESSVRGAYARLQVILADQNRILLLTLVLSIAGGLLGSWLIARGLARPLGELAGAMA
                     VVGAGDLEHPVPVTSRDEVGELAGAFDRMRESLRQSRSDLLRLNAELEAKISQLERTQ
                     VQLVQSEKLASIGEMSAAVAHGLRNPLASLRAAAQLVLRHPNAPSASEHLSSIVQEVD
                     RLDRRISHLLSFSRPAPFHPLRETVAHLIEGLLPAFKEQLQERGVQLQLELPPDLPEV
                     QVDPMQLEQALLEIVTNALDAMPSGGRLRITGSSPVHDGETLVSIEVVDSGPGIPPQV
                     LPSVCEPFFTTRPEGTGLGLAIAKRYVEQNHGRIEIVSRRGETVVRVLLPAAVRSQVA
                     V"
     gene            complement(1925..>2539)
                     /locus_tag="VFD73_18195"
     CDS             complement(1925..>2539)
                     /locus_tag="VFD73_18195"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HZI75914.1"
                     /translation="QLDAAEAAFNAARANLEAARRNASAAGSQVSASGAAIRGADARM
                     AAAEAAVDNAKLQLSYAYITAPTSGTIARRNAESGALVQVGQTLMSIVPDGDVWVTAN
                     LKETQLAHIQVGDRAEFTVDAYPGRDFEGRVVSLSPATGARFALLPPDNATGNFTKVV
                     QRVPVKIQVDQAPQTATPLRPGMSVEVTITTGDKKQSNTVAEHR"
BASE COUNT          465 a          808 c          803 g          463 t
ORIGIN      
        1 ttccaggaaa tcggttgcgc catacttcat ggcctcgacc gcgagaggaa catcgccgtg
       61 tccggtcatc acgataaccg gaatcgtatt ctgtcgcttg cgtagtgact taagcagatc
      121 gatgccgctc attcccggca agcggacgtc cgcaaacacc acgtccggcc gcaaactctg
      181 cagcataccc actgcgctct caccgtcgct ggctacttcg gcctcgtagc cggattcctt
      241 gaggaacgcc ttgattgctc gcgccagggt acgctcgtca tccaccacca ggacggtacc
      301 ggaggggttc ataccgccac ctgagagcgg acggcggcag gcaggagcac tcggaccacg
      361 gtttctcccc gccggctcac gatctcgatg cgaccatgat tttgctctac gtaccgcttg
      421 gcaatcgcca ggccaagacc ggtcccctcc ggccgcgtcg tgaagaacgg ctcgcacacc
      481 gaaggcagta cctggggggg aatcccgggt ccgctgtcga ccacttcgat cgagaccaac
      541 gtttctccat catggaccgg agaggaaccg gtgatgcgca ggcgcccgcc gctgggcatg
      601 gcatcgagcg cattggtcac gatctcaagc agcgcctgct ccagctgcat ggggtcgact
      661 tgtacctccg gcaggtccgg tggcaactcg agctgaagct gcacacctcg ttcctggagc
      721 tgctccttga aggcaggaag aagtccctcg atcagatgag caacggtttc ccgcagagga
      781 tgaaatgggg cgggccggga aaagctcagg agatgactga tccgccggtc cagccggtca
      841 acctcctgga cgatggagct gaggtgttcc gaggcactcg gcgcgttggg atggcgaagg
      901 accagttggg ctgcagcgcg caggctggcc agcgggttcc ggagaccgtg cgcaaccgcc
      961 gcggacattt caccgatcga cgccaacttt tccgactgga ccagctggac ctgggtgcgc
     1021 tccaactggg agatcttggc ttccagctcc gcattcaacc ggagcaggtc gcttcgggac
     1081 tggcgcaggc tctcccgcat gcggtcgaaa gcgcctgcca gctctccgac ttcgtccctg
     1141 gaggtaaccg gcaccggatg ctccaaatct cctgcaccaa ccaccgccat agcgccggca
     1201 agctcaccca gggggcgcgc caagccgcgc gcaatgagcc aggagcccag caaaccgccg
     1261 gcaatcgaga gcaccagggt gaggaggaga atacgatttt gatccgccag gatgacctgt
     1321 aggcgggcgt atgcaccccg gacgctggat tcccgcgcct gccggtagat ctggcggttc
     1381 agctgggtaa gagcgggaag cagccgtccc ttgagctcgc gctgggcggc ccggaacgca
     1441 gcttcgtgct ggcccgagtc atagagccgg aaaatgctgt ctgcggtggc ttggatttgc
     1501 gactggatct gctgaacccc tatcgcgagc tcctgttcgt ccggacggag ctcggctgcc
     1561 cagcgttgct gccagtagtc caccacctgc cgggtaagct cgaactcctt gcgtgcgtcg
     1621 ggatcgagac cgctcagata acgccagatg acttcgcttt gatcgaacat tgccgtctcg
     1681 agctcggcat atgtccgagt tcgggccatg ctcgctccca gcgcctcgag agcacggcgc
     1741 tccagaacgt tgctgcggat cgcgccggcg gtcacgatgg cgagcgcagg caccacgacg
     1801 agcgaaaatc cgaggaggag tttgcgctgg aaggtcacat ttcaaagcta accggtaagc
     1861 cgaggttggt tagtcgttac cggttagcgg gttaccacag gaggacggcc cagaggcgcc
     1921 ggagtcagcg atgctctgcc acggtgttgg actgcttctt gtcgcccgtg gtaatggtca
     1981 cctcgaccga cattcctggt cgcagcggtg tcgccgtttg aggagcctga tcgacctgga
     2041 tcttcaccgg aacccgctgc acaaccttag tgaagttacc ggtggcgttg tcgggcggca
     2101 gcagggcaaa gcgggcaccg gttgcggggc tgaggctgac caccctcccc tcgaaatcgc
     2161 gaccggggta cgcatccacc gtaaactccg cgcggtcgcc aacctggata tgggcgagct
     2221 gggtctcttt caggtttgcg gtcacccaga catcgccgtc cggaacgata gacatcaggg
     2281 tttggcccac ctgaaccagg gcgccgctct ccgcattccg ccgggcgatc gttcccgagg
     2341 taggggcggt gatgtaggca tagctgagtt gaagcttcgc gttgtcgact gcagcctcgg
     2401 ccgccgccat tcgcgcgtcg gcaccgcgta tggctgcacc cgacgccgag acctgacttc
     2461 cggccgctga cgcgttccgc cgggccgctt cgagatttgc gcgcgcggca ttgaatgcgg
     2521 cctcggcggc atccagttg
//
LOCUS       DASRPQ010001599         1003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3659800, whole genome shotgun sequence.
ACCESSION   DASRPQ010001599 DASRPQ010000000
VERSION     DASRPQ010001599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3659800"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(128..>1003)
                     /locus_tag="VFD73_18200"
     CDS             complement(128..>1003)
                     /locus_tag="VFD73_18200"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HZI75915.1"
                     /translation="TNVRRLVVRSAFGQAYYPISRFQRIEGSLRVANVDDAVLSILEP
                     YNPVTGFATEDPTLETNDRPGVNYFQPSAALVFDNSLFGYTGPFYGRRWRLDFAQTVG
                     NWKFSQVTADYRRYDKIAGPVVFASRVLYFGRIGRDAERFRIFGGSTDLIRGNTSGSY
                     RRHECLNANDVNTETGCAELDRLVGTQIGVASGEIRFPILTPALGFVPQGFPPLEGAI
                     FYDLGLTWDETSTIRWSRQPGDDPVRVRTPLQTWGASLRLNLFGFAIARVDYSIPQER
                     KAVKGLWTLSLGPTF"
BASE COUNT          209 a          293 c          338 g          163 t
ORIGIN      
        1 cacggccagg gatcccaaca gtatgggagg ggatttcacg gacggaaaat agcggggagg
       61 cagggagcca gggaagcggg gaagggggaa gaggatggcg acttcccgct gccccgctgc
      121 cccgctgtta gaacgtcggg cccaggctca gcgtccagag acccttcaca gcctttcgtt
      181 cctgcgggat cgaatagtcc acccgtgcaa tcgcaaaacc gaagaggttc agccggaggg
      241 atgcgcccca ggtctggagc ggagtgcgaa cccgcaccgg atcgtcgccc ggctgccggc
      301 tccacctgat ggtagaggtt tcgtcccagg tgagtccgag atcgtagaag atggcgcctt
      361 caaggggcgg aaaaccctga ggcacgaagc cgagcgcggg cgtaagaatg gggaatcgaa
      421 tttcgccgct cgccactccg atctgagtgc cgaccaggcg gtccagctcg gcgcagccgg
      481 tttcggtatt cacgtcatta gcgttgaggc actcgtgccg gcggtatgat cccgaggtat
      541 tcccgcgaat cagatcggtg cttccaccga agatgcggaa ccgctccgca tcgcgtccga
      601 tccggccgaa atacaggacc cgagacgcaa acaccacggg acccgcgatc ttgtcgtagc
      661 gccggtaatc ggcagtgacc tgggagaatt tccagttccc aacggtctgg gcaaaatcga
      721 gtcgccagcg ccggccgtag aacggaccgg tgtacccgaa cagggagttg tcgaagacca
      781 gcgcggccga aggctggaaa tagttgacgc cgggccgatc gttggtctcc agcgtgggat
      841 cctcggtggc aaatccggtg accgggttgt aaggctccag aatgctgagc acggcgtcat
      901 ccacgttggc gacgcggagg ctgccctcga tccgctggaa ccggctgatt gggtagtagg
      961 cctgtccgaa tgccgagcgg acgaccaaac gccggacatt ggt
//
LOCUS       DASRPQ010001600         1050 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1121287, whole genome shotgun sequence.
ACCESSION   DASRPQ010001600 DASRPQ010000000
VERSION     DASRPQ010001600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1121287"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            74..>1050
                     /locus_tag="VFD73_18205"
     CDS             74..>1050
                     /locus_tag="VFD73_18205"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HZI75916.1"
                     /translation="MTTTNLNPTLDPAISAYLEAARDYLIVADSIGQVLALSDVARSL
                     NAVALERLSAPLDTLPLLPHSGVLSLGTNPGSVRYLVLPVDSAGSAIGGLLVATPINQ
                     ASFGPSDLLRSMLLIAPIILLGAGLLGFWLADTSLRPVEGIMDEVDAITDGTSLHRRL
                     AVPLSGDEMARLAQTVNGMLARLERSFASLHRFTADASHELKTPLQVLRAGVERALTH
                     PGTPPEIIQSLDETLAQINQMTEMVENLLTLARADEGRAPLAVEESDLRAVVADVAET
                     AEMLGEDAAIRAVHTIPSTPVRLAVDPHRIREMLLNIVTNAIKYTPQGGT"
BASE COUNT          197 a          325 c          331 g          197 t
ORIGIN      
        1 tgagcggctc ggcatcgaag ccgagctggc gcagcgctgg ctgactcagt cgtaaaaggt
       61 gcttggccga attgtgacca ccaccaatct caatcccacg ctcgatccgg ccatcagtgc
      121 ctatctggaa gctgcgcgcg actacctgat cgtggccgac agcatcggcc aggtgctcgc
      181 gctgtcggat gttgcccgct ctctcaatgc cgtggccctg gagcgactca gcgcgccgct
      241 cgacaccctg ccgctcctgc cgcattcggg ggtgctgtca ttgggaacca atccaggatc
      301 ggtgcgctac ctggtgctgc cggtggacag cgcaggatcc gctattggtg gactgttggt
      361 ggcaacaccc atcaatcagg catcgtttgg tccctctgat ctgctgcgtt cgatgctcct
      421 catcgctccc atcattctcc tgggagccgg acttctgggg ttctggttgg ccgacaccag
      481 cctgcggccg gtggaaggga tcatggacga agtggacgcg atcaccgacg gaaccagcct
      541 tcatcggcgg ctggcggtgc cactctccgg ggatgagatg gcgcggctgg cgcagacggt
      601 caacggtatg ttggcccggc tggaacgaag ctttgccagc ctgcaccgtt tcactgccga
      661 cgcgagtcac gagctcaaga caccgctcca ggtactgcgt gctggcgtgg agcgggcgtt
      721 gacccatcct ggaacgccgc cggagatcat tcagtcactg gatgaaacgc tcgcccaaat
      781 caaccagatg accgagatgg tcgagaacct gctcaccctt gcccgggcgg atgaagggcg
      841 tgccccgctg gcggtggaag aaagcgatct ccgggcggtg gtagccgatg tagcggagac
      901 tgcggagatg ctaggtgagg acgcggccat aagagccgtg catactatac cttcgacgcc
      961 ggtgcgactc gcggtagacc cccatcgtat tcgggaaatg ctcctcaaca tcgtgacgaa
     1021 cgcaatcaaa tacacccccc agggagggac
//
LOCUS       DASRPQ010001601         1250 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1780643, whole genome shotgun sequence.
ACCESSION   DASRPQ010001601 DASRPQ010000000
VERSION     DASRPQ010001601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1780643"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            66..188
                     /locus_tag="VFD73_18210"
     CDS             66..188
                     /locus_tag="VFD73_18210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75917.1"
                     /translation="MPRLVALLHDLAQAGSQAIVATHSPMVASVPGASIPELGD"
     gene            complement(341..745)
                     /locus_tag="VFD73_18215"
     CDS             complement(341..745)
                     /locus_tag="VFD73_18215"
                     /inference="COORDINATES: protein motif:HMM:NF024788.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SHOCT domain-containing protein"
                     /protein_id="HZI75918.1"
                     /translation="MTLAASSYSYPLLGAFWTIFIVFLWVIWFWILITIFIDLFRSRD
                     LSGWAKALWFIFILILPLIGVLVYLIARGGKMHEHAEKDAQVQEQQFRQYVQEAAGSE
                     STADQLSKLADLRDRGVITADEFASQKAKILT"
     gene            complement(863..>1250)
                     /locus_tag="VFD73_18220"
     CDS             complement(863..>1250)
                     /locus_tag="VFD73_18220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75919.1"
                     /translation="SRKVADAQLLTNSRIKLSVTARRQLLSGDIDPRLPMLIVAMVSR
                     HPVHIVDFGGWSPGGGPASLLRWVDLATVDRGHLTRAAYLRWMQSFIKVQRAQFLPAR
                     SEQVTLPTGQAVLRIEYLAPSPLSQP"
BASE COUNT          238 a          404 c          400 g          208 t
ORIGIN      
        1 gacccgggtc aaccatccag gcttttacct gatggacgaa ccgaggcgcc gctgtcgttt
       61 accgcttgcc tcggcttgtc gccctgctgc atgacctcgc ccaggccggt tcccaggcca
      121 tcgtcgccac ccactcaccc atggtcgcct ccgtccccgg cgcgagcatc ccggaactgg
      181 gcgattgagg catccgaccc atgctctggc agctcacggc ctagctccgg caccggccgg
      241 ccccacgcgc cgccgacagg tcagaagcgg ccggcgcctc ccggcgcgcg aacggcaaac
      301 cgggaggcgc cggcataaat gcgaccagcg cgatccgcgg tcaggtcagg atcttggcct
      361 tctggcttgc gaactcgtca gccgtgatga ccccccggtc gcgcaggtcg gccagcttgc
      421 tcagctggtc tgccgtgctc tccgagccgg cggcctcctg gacgtactga cggaactgct
      481 gctcttgaac ttgtgcatcc ttctcggcgt gctcatgcat cttgccgccg cgggcgatca
      541 ggtacaccaa gaccccgatc agcgggagga tcaagatgaa gatgaaccac agggctttgg
      601 cccagccgga cagatcacgg ctgcggaaca ggtcgatgaa gatggtgatc aagatccaga
      661 accagatcac ccacaggaag acgatgaaga tcgtccagaa cgcacccagt agagggtaag
      721 agtaggaact cgcagcgagc gtcatagtgt ctccttggcg cgcagggcgc cccgtaagcg
      781 ccaggctgac cagtggtgaa tgtgagcagc atgatcgtac tgggccctgc aggacgaagt
      841 ctcgggtaca cgctaagacc gatcacggtt ggctgagggg gctcggcgcg aggtactcga
      901 tccgcaggac ggcttggccg gtaggcaacg tgacctgctc gctccgggca ggcaggaatt
      961 gggcccgctg caccttgatg aagctttgca tccagcggag gtaggccgcg cgggtaaggt
     1021 gccccctgtc gaccgttgcc aggtccaccc accgcaggag gctggcaggt ccgccaccag
     1081 gtgaccagcc gccgaagtcc acgatgtgca ccgggtggcg agagaccatg gcaacgatga
     1141 gcatcggcag ccgcggatca atgtcaccgc taaggagctg tctcctggct gtgacagaca
     1201 acttgatgcg gctgttagtc agcagctgag cgtcggcaac tttcctggag
//
LOCUS       DASRPQ010001602         1062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1460413, whole genome shotgun sequence.
ACCESSION   DASRPQ010001602 DASRPQ010000000
VERSION     DASRPQ010001602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1460413"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(587..>1062)
                     /locus_tag="VFD73_18225"
     CDS             complement(587..>1062)
                     /locus_tag="VFD73_18225"
                     /inference="COORDINATES: protein motif:HMM:NF016993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Phenylacetic acid catabolic protein"
                     /protein_id="HZI75920.1"
                     /translation="YLDKPWTDWAEFVAANAVLDSAFTLVIEALANGNVEVLRSRLKK
                     MLQEERYHFLHGRSWMREATAGKAIERAWRDGLEWIGPEAADVDQLHREGQLAYGVLA
                     LRRRLEERVGSPTPAAEIDWAQWDPVRRRSAAGGIDQATLDMLQGLAEKRYMPSA"
BASE COUNT          176 a          355 c          314 g          217 t
ORIGIN      
        1 ccataactca attaaggttc ggaaaacaag ctcgggagag ccgcacaggt ctgccggtct
       61 cgggaaggca aagccggcag aacctgtaga aaattgaagc gacctatcgt tacggttgat
      121 aacccgccgg tgtgacccaa cgagtcctta ccgccgccca gtccagccgt ttccggcagg
      181 accttcgctc cgtactaacc gagtccttgc gggccggggg ttcgggagcc caccgatgtc
      241 gtttccttca tcggctggct ttctgacagg tcgcgggcgt agcgtaaggt ccaaggtttt
      301 gagccgcaac tccaaactgc ggttcgcaaa cggatgctcg ccgataatgc ttccctcctc
      361 cttgtgggga ggttccggga ggggtcgtca gtacttgctg ccttcgtaga aactgccgca
      421 cgctcggcac ttgcactgca tcgtcatcac ctggctgccg aacagcgaga tcacctcggt
      481 atccgtcgcc ttacagaacg gacacgctgg cctcaattct ccctccccta ttgcggcgtt
      541 ttttccctcc cccgcttgcg ggggagggcc cgggaggggg ccctcgttat gcactcggca
      601 tgtacctctt ctcggccagc ccctgcagca tgtcgagcgt tgcctggtcg atgccacccg
      661 ccgcgctgcg gcgcctgacc ggatcccatt gggcccaatc gatctcggcg gccggagttg
      721 gactcccgac tcgctcctcg aggcggcggc gcagcgcgag gaccccgtag gcgagctggc
      781 cttcgcgatg cagttggtcg acgtcggcag cctccggacc gatccattcc aaaccatcgc
      841 gccaggcgcg ctcgatggct ttgccggccg tcgcctctcg catccagctt cggccatgca
      901 ggaagtgata gcgctcttcc tgcagcatct ttttcagccg gctgcgcagt acctcgacat
      961 tgccgttggc cagcgcctcg atcaccaggg tgaaggcgct gtcgagcacc gcattggctg
     1021 ccacgaactc cgcccagtcg gtccatggct tgtcgaggta gg
//
LOCUS       DASRPQ010001603         1664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3660169, whole genome shotgun sequence.
ACCESSION   DASRPQ010001603 DASRPQ010000000
VERSION     DASRPQ010001603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1664
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3660169"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..604
                     /locus_tag="VFD73_18230"
     CDS             <1..604
                     /locus_tag="VFD73_18230"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HZI75921.1"
                     /translation="AGARVLEHTGPTIAAQRNAAISEARNQWIFAVDADERSTDQLRD
                     EIRRVLERPDHPVYRVRRRNFYLGQELTRGRWGKDWVTRVFTRDRRYIERRVHERLEP
                     APNPGTLQACLDHVPYRDLSHQLEKMNRYARWGAEDLFERGRRATAWDLSVRPAARFL
                     RAYLLQGACLDGRFGLTASALGAYTNFLKYAHLWALERRA"
     gene            601..>1664
                     /locus_tag="VFD73_18235"
     CDS             601..>1664
                     /locus_tag="VFD73_18235"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HZI75922.1"
                     /translation="MSRGSSVTVAFLTSARAWRGSGVSLANIAHGLRERGHRPHLLAG
                     EHAVVEGFAHRGLPAQRVPTADTTLPAVLALARALRTLQADCLIVDRPRDLRLGALAS
                     VLYPVRLINRYNLSRTRPPRDFVSRLAYHQVSLTIFVSHTNARQALGAGRYLSRRPYR
                     VIHEGVGPEFHPDIAAAAAFKAQLELSGRDFVLAVGSLTADKRYSFLLHAFHQLGTRA
                     PVLVVCGDGPLRDQLKSEARDLTVDARFLGLVDPGALRGAYSSALCFVHACGIETFGL
                     SVLEAMACACPVVAVNQGAVPEVLGDTGILSSDLPADFAAQLRDLMASPERQRALGSA
                     GRQRATSLFSLARMQREHSEA"
BASE COUNT          270 a          555 c          539 g          300 t
ORIGIN      
        1 ggccggcgcc cgcgtgctgg agcacaccgg gcccaccatc gcggcacagc ggaacgctgc
       61 tatttccgag gcccgaaatc agtggatctt tgcggtcgat gctgacgagc gcagcaccga
      121 ccagctgcga gacgagatca ggcgcgtcct cgagaggccg gaccatccgg tgtaccgggt
      181 gcggcgaaga aacttctacc tgggacagga gctcacccgg ggacgctggg gaaaggattg
      241 ggtcactcgc gtcttcacgc gagatcggcg ctacatcgag cgtcgggtgc acgaacggct
      301 ggagcccgct cccaatcccg gaacactgca agcgtgtctc gaccacgttc cctaccgaga
      361 cctgtcccat cagctggaaa agatgaaccg gtatgcccgg tggggtgcag aggacctctt
      421 cgaacggggc cgacgcgcaa ccgcctggga tctgagcgtt cgcccggcgg caaggttcct
      481 ccgagcatat ctgctgcagg gagcgtgtct ggacggacgc ttcggcctga cggcctcagc
      541 gctcggagcc tataccaatt ttctcaagta tgcgcacctc tgggccctgg agcggagggc
      601 atgagccgag gttcctcggt tacggtggcc ttcctcacgt cggcgcgggc gtggagaggt
      661 tcgggagtga gtctcgccaa cattgctcac gggctgcgcg agcgaggaca tcggccccac
      721 ctgctggccg gagagcacgc agtggtcgag ggctttgccc atcgagggct cccggcgcaa
      781 cgagttccca ccgccgacac cacgcttccg gcggtgctgg ctctggctcg tgcgctgcgc
      841 accctgcagg ctgactgcct catcgtagac cgcccccgag acctgaggtt gggagccctc
      901 gcttccgtgc tgtatccagt gcggctgatc aaccgataca atctgagccg aacccgtccc
      961 ccgcgggatt tcgtgagtcg gctcgcctac caccaggtaa gcctcacgat ttttgtcagt
     1021 cacacgaacg cgcgacaggc actcggcgcc ggccgatatc tctcccgccg gccgtatcgg
     1081 gtcatccatg aaggcgtcgg gcctgaattc catcctgata tcgccgcagc cgcggccttc
     1141 aaggctcaac tggaattaag cggccgagac ttcgtgctcg cggtcggctc cctgacggcg
     1201 gacaagcggt actccttcct gcttcacgct ttccaccaac tcggcacacg cgccccggtg
     1261 ctggtggtct gcggcgacgg cccgctccgt gatcagctca agtcggaggc tcgcgatttg
     1321 accgtggatg cccgcttcct cggcctggtt gacccggggg cgctgcgcgg agcatacagt
     1381 tcggccctct gcttcgtgca cgcctgcggc atcgaaacgt tcggtctgag cgttctcgag
     1441 gcgatggcgt gcgcctgccc ggttgtcgcc gtgaatcagg gtgccgttcc ggaggtgctg
     1501 ggggataccg ggatattgag ctccgatctg cctgcggact ttgccgccca gctgcgcgac
     1561 ctcatggcct cgccggagcg ccagcgagcc cttggaagcg ccggccggca gcgcgcaact
     1621 tccctgtttt ccctggcccg aatgcaacga gagcactcgg aggc
//
LOCUS       DASRPQ010001604         1298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1780956, whole genome shotgun sequence.
ACCESSION   DASRPQ010001604 DASRPQ010000000
VERSION     DASRPQ010001604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1298
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1780956"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..582
                     /locus_tag="VFD73_18240"
                     /pseudo
     CDS             133..582
                     /locus_tag="VFD73_18240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003419511.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
BASE COUNT          241 a          371 c          480 g          206 t
ORIGIN      
        1 ggccaagccc gtagcggcgg ggtccgaggc agtagcccct gggcgtgcgg agccgccggt
       61 cttgacaaat gcgacttatc gtgtcggtag cgggcatagc ccaagacgac ggcgagaagg
      121 gctgcgcgga acatgttcga gcggtttacc gacagggcgc ggcaggttgt tgtcctggcg
      181 caagaagaag ccaggatgct caatcacaac tacatcggca ccgagcacat cctgctcggc
      241 ctcatccacg agggcgacgg cgtcgcggcc agggcgctgg agtcgctggg gatcagcctg
      301 gacgccgtgc ggcagcaggt cgaggagatc atcggccgtg gccagcaggc gccgtcgggg
      361 catatcccgt tcacgccgcg ggccaagaag gtacttgagc tgtcgctacg tgagtcgcta
      421 caactcggcc acaactacat cggtaccgag cacatcctgc tggggctgct ccgcgagggc
      481 gatggcgtgg ccgcgcaggt gctggtgagg ctgggcgcgg atctgaaccg ggtgcttcgg
      541 caggtgatcc agctgctgca cgggtatcag ggccaggacg cggggagtga gggttctcgc
      601 ccgggtgagc gggcacctgc cgggctgccc gataacgctc ccgcgtggtt cgacgcgctg
      661 gaccggcgcg tgacggcgct cgaacgctgg gtgagcatgc agcctgacct ggaagaccta
      721 gaccaggaga tcgcgcaggt acgccgcgag aaagcagccg cgatcgaacg gcaggagttc
      781 gaggactccg ccctactgcg cgaaaaggag aagcagttgc tcgccgaccg ggctgaccgg
      841 gagaaggagt gggcggggtc cgctgctggc cggaggacgg tggccaagga actggaccgg
      901 ctgaataccg aactggaaag gctgcgggcg accttgcgcg agcatggcat cgagccgggc
      961 gacgctgcat aggtgcccgg gcgatagcgt tctcggcagt cattgctggg cgcacgatcg
     1021 tgcgcagacc acatgcagaa gggcctttct ctgttcgaga atgggcctct agccttggta
     1081 gcggggggga tttgaacaag agtctcgttg gacgctactt cgaagagatc tgggatcaac
     1141 ggaaaatggc cgcatgcaag agctcatggc tgactctccg agcatgggct gcgccacctc
     1201 attactgcag gcacagctcc tggaggggtg cccacatggg cccggtcggg caggtcagct
     1261 gtccaccatg ctgcggctgg gggtttgagg ctgactgg
//
LOCUS       DASRPQ010001605         1105 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2731265, whole genome shotgun sequence.
ACCESSION   DASRPQ010001605 DASRPQ010000000
VERSION     DASRPQ010001605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2731265"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..325
                     /locus_tag="VFD73_18245"
     CDS             134..325
                     /locus_tag="VFD73_18245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75923.1"
                     /translation="MPPALSLNSARGRWILAGSILGSAAVFLESTVVNVALPAIAGDF
                     GLGGTFRKMRQQQQTLRPW"
     gene            complement(458..>1105)
                     /locus_tag="VFD73_18250"
     CDS             complement(458..>1105)
                     /locus_tag="VFD73_18250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75924.1"
                     /translation="ESYRRTVPVVGPTEDSVATEGTLAGWPIQSADPDSLRRNGFVQG
                     NWPAPNPMSEHPDLGPTYFAPDARVLFTDWFLGSHCISVESDSARAGAGSRIVARFKP
                     AKGTRKTASLEGSLEFDRNSLSLRALNFEFAARPRWAPRGTAAGEIRFARLPDGAWLP
                     VDWQMRVPIPKVTGDGQHYRFFAVLEVGGRVTAIRDVNGQRDLRAEAALRESERS"
BASE COUNT          202 a          352 c          347 g          204 t
ORIGIN      
        1 agcacttgct gggcgacaag gttatgagcg gcaaggcaca aggcgagaat gccgcacgcg
       61 ctgcgaagct tcttcatgat gaaaaagtag cgaactgcag cgcctccact gcaagagcgg
      121 tgtatcatgg ggcatgcctc ctgctctctc gctcaactca gcacgcggac gctggatcct
      181 cgcgggctcg atactcggct ccgccgcggt gttcctggag agcactgtgg tcaacgtcgc
      241 gctgcccgcg atcgcgggtg acttcgggct cggcggaaca ttccgaaaaa tgagacagca
      301 gcagcagacc ctaagaccct ggtaacgtct ccatgacgag tgtggggcaa taaagcccga
      361 caacgactta gcgctgccgg gcttgcgtta tgacctcgta tctcgtggtg tcggtgtcac
      421 ccgcttcggc accctacagg gccgcgacac cgtctgatca cgatctctcg gattccctga
      481 gtgcggcctc ggcacggaga tcccgctgcc cgttgacgtc gcgaattgcc gtcactctcc
      541 ctcccacctc gagcacggca aagaagcggt agtgctgtcc atctccggtg accttcggga
      601 tcggtacccg catctgccag tcgaccggaa gccaggcacc atcggggagc cgggcgaacc
      661 ggatctcacc tgcagcggtt ccccgcggtg cccaacgggg ccgtgccgcg aattcgaaat
      721 tcagagcgcg tagcgacaga gagtttcgat cgaattcgag cgatccttcc aggctcgcgg
      781 ttttgcgggt gcccttggcc ggcttgaatc gcgcgacgat gcggcttccc gccccggccc
      841 tggccgagtc cgactccacc gagatacagt gcgatcccag aaaccagtcg gtgaacagca
      901 cccgggcatc gggagcgaag tacgtgggcc cgagatcggg gtgttcactc atcggattgg
      961 gcgccggcca atttccctga acgaatccgt ttcggcggag gctgtcggga tccgcgctct
     1021 ggatgggcca gcctgccagt gttccctcgg tggcaaccga gtcctcagtc gggccgacga
     1081 cgggtacggt gcggcggtag ctttc
//
LOCUS       DASRPQ010001606         1123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1460944, whole genome shotgun sequence.
ACCESSION   DASRPQ010001606 DASRPQ010000000
VERSION     DASRPQ010001606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1460944"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..309
                     /locus_tag="VFD73_18255"
     CDS             <1..309
                     /locus_tag="VFD73_18255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75925.1"
                     /translation="ARDVDVVGTRMAAVVGGHASFSTDPSLGPVQWDSGGILHVVDLQ
                     TGSDVVLDGPGVFRRPRLSPDGSRVVAELYPLIITDVGEGIQDTTVSRAGDLYLIGQP
                     "
     gene            306..>1123
                     /locus_tag="VFD73_18260"
     CDS             306..>1123
                     /locus_tag="VFD73_18260"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HZI75926.1"
                     /translation="MRRARSVSLIVLALLGIARLLHGQTEGALTGRVYEAGTDRALSQ
                     AQILVDGRVRSLTDTAGLYRTRGIRSGWHSVAARMIGYRSLVRDSVFVRAGTTVTVDF
                     PLETNPLQLAPLVVSAPVDPVLDPLATASEQKISAADLRELPVSSLQEALALSAGTVG
                     ESYRGGRLGEESFILDGLGVKNQLDASNGGLGIVIPSEVLSEAALVTNGFSARYGQAL
                     SGLINVVTKDPSSAWDGRVAYETDRPIGGRGDYGLDRLIAEADGPLTGRLGIVAA"
BASE COUNT          196 a          334 c          386 g          207 t
ORIGIN      
        1 gcccgtgatg tcgatgtggt cggaacccgg atggcagccg tggtaggagg acacgccagc
       61 ttcagcacag acccgtcgct cgggcccgtg caatgggaca gcggcggcat actgcacgtt
      121 gtcgatctcc aaaccggcag cgatgtggtg cttgacgggc cgggagtgtt ccggcgtccc
      181 cgactttccc ctgatggcag cagggttgtg gctgaacttt acccgctgat catcaccgat
      241 gtgggtgaag gtatccagga caccacggtg tcgcgggcgg gggatctcta tctgatagga
      301 cagccgtgag gcgcgcccga tccgtctccc tcatcgttct cgcgctgctg ggcatcgccc
      361 ggttgctcca tggccaaacc gaaggtgctc tgacgggacg agtgtacgaa gcgggcaccg
      421 atcgagcgtt gtcacaagcc cagatcctgg ttgacggccg agtccgctcc ctcaccgaca
      481 ccgcgggcct gtaccgaacc cggggaatac ggagcggctg gcacagcgtc gccgcccgga
      541 tgattggata tcgcagtctg gtgcgagaca gcgtgttcgt tcgtgcagga accactgtca
      601 cggtggattt cccgctggag acgaatccgc tgcagttggc tcccctggtg gtgagtgcgc
      661 cggttgatcc ggtgctggat ccgctggcca ccgcatcaga gcagaagatc agcgccgccg
      721 acctgcggga gctcccagtc agctcccttc aggaggcctt ggcattgtcg gccggaacgg
      781 tgggcgagag ctatcgcggc ggccgtctgg gagaggagtc tttcattctc gatggacttg
      841 gagtcaagaa ccagctcgac gccagcaacg gcggcctggg catcgtgata ccatccgagg
      901 tcctgagcga ggcggcgctg gtgacgaatg gattttccgc ccggtacggt caggcgctct
      961 ctggactgat aaacgtcgtc acgaaggacc cgagctcggc ctgggacgga cgtgtcgcgt
     1021 atgaaaccga tcgaccgatt gggggacgtg gggactatgg cctggaccgg ctgatcgccg
     1081 aggcagatgg acccctgacg ggaaggctcg gcattgtcgc cgc
//
LOCUS       DASRPQ010001607         1735 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3003362, whole genome shotgun sequence.
ACCESSION   DASRPQ010001607 DASRPQ010000000
VERSION     DASRPQ010001607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1735
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3003362"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(226..810)
                     /locus_tag="VFD73_18265"
     CDS             complement(226..810)
                     /locus_tag="VFD73_18265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75927.1"
                     /translation="MSTSSNLGPPARDRDRDRLSDHDKSIIGQAHQVVGVSGPAAVRA
                     YFGTTAVSYARTAHAYAEALSQATRVIGELLAIVDRLADGGAAVTVDSEWDELLARSQ
                     PESGGQAEVIGASSANAPADIMLVRLRMYEITFVGRAGDVLRAAFDDCTVTVGPGTTT
                     LRAQLPDQAALWGLVQRIIGLGLEVVDLHLVAPG"
     gene            1034..1531
                     /locus_tag="VFD73_18270"
     CDS             1034..1531
                     /locus_tag="VFD73_18270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75928.1"
                     /translation="MRALTDVTGETLRLWREAKGWDVPRMARELRKVAKDSGEDVAAH
                     HGLVKMIPQWERGGRVPRERYRLLYLKIFADTLGDLSLGMAFGTDTVLRLAEVRSRAA
                     RLPGPDEIRALEGAALAKPRETITPAEIRALAAEAIAHLHEVADKLAELSALLGDDEA
                     GEDKP"
     gene            1528..1677
                     /locus_tag="VFD73_18275"
     CDS             1528..1677
                     /locus_tag="VFD73_18275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75929.1"
                     /translation="MSLRDDEIRRVVAELDIHIAEVEASVAVLKALLADEVPGEEDSV
                     DPKLR"
BASE COUNT          309 a          559 c          569 g          298 t
ORIGIN      
        1 ccggtttacc gcacatgccg aaatgagggc atcagcttcg cgtatatcca tgcagcgact
       61 ggcatactca ctcatgattc agcgagggga cagtgatcca gtggcgcgtc ccgcgccgtc
      121 tttccgcaaa tatggctgga agccagatca tcgattgcgt ctttatcaag tccgttggct
      181 tccacgcggc cgggacgcgc cgatcgcccg agcgaatcat caccattacc cgggcgccac
      241 gaggtgcagg tccaccactt caagtccgag gccgatgatc cgctgcacaa gcccccatag
      301 ggcggcctgg tccggcagtt gcgcgcgcag ggttgtcgtg cccggaccta cggtcaccgt
      361 gcagtcatca aatgctgcgc gtagcacgtc cccggcccgg ccgacgaaag taatctcata
      421 catgcgcagc cggaccagca ttatgtctgc cggagcattc gcagaactgg cgccgatcac
      481 ctcagcctga ccccctgact ctggctggct gcgggccagc aactcatccc attcgctgtc
      541 cacggtcact gcggccccgc cgtcggcgag gcgatcgacg atggcgagca gttccccgat
      601 gaccctcgtg gcctggctga gcgcctcggc gtaggcgtgt gcggtgcggg cgtatgagac
      661 ggctgtggtg ccgaagtagg cccggacagc ggcgggtccc gacacgccga cgacttggtg
      721 cgcctgcccg atgatgctct tgtcgtggtc gctgagccgg tcccggtccc gatcgcgggc
      781 gggcggcccg aggttggatg atgtgctcac gccatttgtc ccactaggtg cgtcattcag
      841 taaccctctg ctggaagtgc ggacacgatg gccgcgccaa gcattccgtg acgcgggggg
      901 ccgcatcggt ccccgcgcac gctcgccgat gcatcccggc acagttcagt gcacgttcac
      961 ggcatggcat agtgaaaccc aaggagcgaa cgggagcgaa ccggagcgca caagcgaccg
     1021 ggagttcgcg aggatgcgtg cgttgaccga tgtgactggt gagactttgc gcctgtggcg
     1081 tgaagccaaa ggctgggacg tgccgcggat ggcacgcgag ctccgcaagg tcgccaagga
     1141 ctccggcgag gatgtagccg ctcaccatgg cctggtgaag atgatcccgc agtgggaacg
     1201 aggcggccgc gtacctcgcg agcggtacag gctgctgtac ctaaagatct tcgcggacac
     1261 gctcggcgac ctgtccctgg gcatggcctt cggcacggat accgtgctgc ggctcgctga
     1321 ggtccgctcc cgcgcagccc gcctgcccgg ccctgacgag atcagggcgc tggagggcgc
     1381 tgctctagcc aagcccaggg aaaccattac tccagccgag atccgcgccc tggccgcgga
     1441 ggcgatagcc cacctgcacg aggtcgccga caagctcgcg gaactttcgg cgctgctcgg
     1501 tgatgacgag gctggcgagg acaagccatg agcttgcgtg atgacgagat caggcgggta
     1561 gtggccgagc tcgatattca catcgcagaa gtcgaggcca gcgtcgcagt cctgaaagcg
     1621 ctcctggccg acgaagtccc tggcgaggaa gactcagttg acccaaagct tcgttaggag
     1681 cctgggtgcc aattgcgtga acgggcccct ctcttccgct ccttgccgcg aggcg
//
LOCUS       DASRPQ010001608         1892 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1122369, whole genome shotgun sequence.
ACCESSION   DASRPQ010001608 DASRPQ010000000
VERSION     DASRPQ010001608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1122369"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..510
                     /locus_tag="VFD73_18280"
     CDS             <1..510
                     /locus_tag="VFD73_18280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75930.1"
                     /translation="GTLVDSIPLIGPGNAQFSTVAGDGLVYVVQDGDPSVDEGRLSIV
                     DPVRRQELASFGGFGFGPGDLTADGEERVLISSRTEGLMEFDTAERAVIRGEGNGIAI
                     PANTGVAVDAEGRIYALEAGCSGKGVVHILRADFSEIRKVAVGQCATQILLALVPPAG
                     VEPSDTTGL"
     gene            523..1284
                     /gene="recO"
                     /locus_tag="VFD73_18285"
     CDS             523..1284
                     /gene="recO"
                     /locus_tag="VFD73_18285"
                     /inference="COORDINATES: protein motif:HMM:TIGR00613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HZI75931.1"
                     /translation="MPLVSTPAIVLSALRYSETSKIVRLATRDLGVQSAIAKGALRPK
                     SRFGAALQLLSEGQVQLLMKEHRELNILTGFDLRKLHVGLADDLERYAVASALSEVML
                     RFAPPDPHPESFDALRASLELLEDTPPGVTESLGLRLLWQLVSVLGFAPTLDVCVVDG
                     RELPTNGALPFSTREGGALCPICAAQQGATQLPEEDRHDLVALLNTDAPLPQLDARHA
                     AAHRRLLARYIRYHLGEGAELPALEFWTQRPWAAA"
     gene            1281..>1892
                     /locus_tag="VFD73_18290"
     CDS             1281..>1892
                     /locus_tag="VFD73_18290"
                     /inference="COORDINATES: protein motif:HMM:NF012239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HZI75932.1"
                     /translation="MIIGTAGHIDHGKSTLVTALTGRPMDRLAEERRREITIDLNFAP
                     LQLENGRIAGIVDVPGHEDFVRTMVAGASGIDLALLVIAADEGIMPQTEEHLLVLEQL
                     GVRTGTPVLTKVDLVDRDWLELVTLEVAERLASSSIAFDPPVSVSARTGLGIDGLRQL
                     LVTHMKPAGGASASDGFRMPIDRVFSMAGVGTVVTGTPWSGRLS"
BASE COUNT          327 a          597 c          624 g          344 t
ORIGIN      
        1 ggaaccctgg tcgattccat tccgctgatc ggccccggca acgcccagtt cagcaccgtg
       61 gccggtgatg gactggtcta tgtggtgcag gacggcgacc ccagcgttga cgaggggcga
      121 ctctcgatcg tcgatccggt ccgccgccaa gagctcgcca gcttcggagg gttcgggttc
      181 ggacccggtg acctgactgc cgacggcgag gagcgggtcc tgatcagctc cagaaccgaa
      241 ggattgatgg agttcgacac cgccgaacgc gcagtcatca ggggagaagg aaacggcatt
      301 gccatcccgg ccaacaccgg ggtggcggtc gacgcggagg gcaggatcta cgctctggaa
      361 gctgggtgtt cgggaaaggg agtggtgcac atcctacgtg ccgacttctc tgagattcgg
      421 aaagtcgcag ttggtcagtg tgccacccag atcctccttg cgctcgttcc cccagccggc
      481 gtcgaaccat ccgacacaac cggtctgtag tcgaatcgcc gtatgcctct cgtctccacg
      541 cccgccatcg tactctcggc attgcgctac agcgagactt cgaaaatcgt gcggctggcc
      601 accagggatc tgggagttca gagtgcaatt gccaaggggg cgctccggcc aaagagccgg
      661 ttcggggcgg cactacagct cctgagcgag ggacaggtcc agttgctgat gaaggaacat
      721 cgcgagctga acatcctgac cgggttcgat ctgcgcaaac tgcacgttgg actggccgac
      781 gatctggagc ggtacgccgt cgccagcgcc ctgagtgagg tgatgctgcg gttcgctccg
      841 ccggatccac atccggagag cttcgatgca ctcagagctt cgctcgagct gctggaggac
      901 actcctcctg gggtgacaga atcgttgggc ctccgcctgc tctggcagct ggtcagcgtg
      961 ctcgggttcg ccccgaccct cgatgtgtgc gtggtggacg ggcgcgagtt gcccacgaat
     1021 ggagcgctcc ctttcagcac gcgcgagggg ggtgcgctct gcccgatctg cgccgcgcag
     1081 caaggagcga cccagctgcc ggaggaggat cgccacgacc ttgtggccct gttgaataca
     1141 gacgccccgc tgcctcaact cgatgccaga catgctgcgg cccatcgacg cctgcttgcc
     1201 cgctacatcc gatatcacct gggcgaaggc gctgagctgc ccgctctcga gttctggacc
     1261 cagcggccct gggcagcggc atgatcatcg gcactgcagg acacatcgat cacggcaagt
     1321 ctaccctggt caccgcgctc accggccgcc caatggaccg gctcgccgag gagaggcggc
     1381 gagagatcac catcgatctg aactttgcgc cgctccagct ggagaacggc cgcattgccg
     1441 ggatcgtgga tgttcccggt catgaggact tcgtccgaac catggtcgct ggagcctcag
     1501 gcatcgatct ggcgctcctg gtgattgcgg ccgatgaagg aatcatgccc cagacggagg
     1561 agcacctgct ggtcctggag caactcggag tgcggacggg aactccggtg cttacgaagg
     1621 tcgacctggt ggaccgtgat tggctcgagc tggtaacgct cgaggtggcc gagcggctgg
     1681 cgtcgtcttc catcgccttc gatccgccgg tctccgtctc tgccagaaca ggactcggca
     1741 ttgacgggct ccggcagctg cttgtcaccc acatgaaacc ggccggcggt gcctcggcat
     1801 ccgacggctt tcgcatgccg atcgaccggg tcttttccat ggcgggagtc ggtacggtgg
     1861 tcaccggcac gccgtggtcg gggcggctga gc
//
LOCUS       DASRPQ010001609         1070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2376401, whole genome shotgun sequence.
ACCESSION   DASRPQ010001609 DASRPQ010000000
VERSION     DASRPQ010001609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2376401"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..631
                     /locus_tag="VFD73_18295"
     CDS             <1..631
                     /locus_tag="VFD73_18295"
                     /inference="COORDINATES: protein motif:HMM:NF019268.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HZI75933.1"
                     /translation="EGSWRPRPRVGVEGFVFNGWDTDLDPNHGKSGGARVEFLPGGGT
                     TLGLSGLYGSEGEQDATNNRYLLSFDYAVQPSWDWVVAGEANLGGDRGSLPDGSDANW
                     GGGMVTVFHRLTRSWGIAARAEVFRDADAARTGATQTLESYSIAPSYSLGVGREGIFA
                     NVQRTTIRIPRLQLRGEVRVNHSSAAFFETSDQPSDWNIEYRLQLVTTF"
     gene            643..>1070
                     /locus_tag="VFD73_18300"
     CDS             643..>1070
                     /locus_tag="VFD73_18300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75934.1"
                     /translation="MELYRLRDVHRSIKLAALLFLLVLGYSYIFAFLMVKTWSGLTPT
                     KVAATYVPKPGMDMSAMPEQSQSTTQQLNLAEVPEMQHTVDTNLLIQDSHIHIMIYAI
                     VAALEAVIILGLGWPGWFRDTVIVAAFGFGALDFAGQWLM"
BASE COUNT          195 a          348 c          341 g          186 t
ORIGIN      
        1 cgagggcagc tggagaccca ggccaagagt gggcgtcgaa gggtttgtct tcaacggctg
       61 ggacaccgat ctagatccca atcacggcaa gagcggcggc gccagggtgg aatttcttcc
      121 cggaggcggt accacactgg gcctcagcgg actctacggc tccgagggcg agcaggacgc
      181 caccaacaat cgctatctcc tgagcttcga ttacgcggtg cagcccagtt gggattgggt
      241 ggtggccggc gaagccaatc tcggcggcga tcgcgggagc ctgcccgatg ggagcgacgc
      301 gaactggggc ggcggcatgg taaccgtgtt ccatcgcctc acccgaagct ggggcatcgc
      361 ggcccgggcg gaggtcttcc gcgatgccga cgctgcccgc accggcgcca ctcagacgct
      421 cgagtcctac agcatagcac cgagctactc tctcggcgtc ggccgcgaag ggatcttcgc
      481 caacgtgcag cgcaccacca tccggattcc ccggctgcag ctcaggggcg aggtccgggt
      541 caaccactcc agcgcggcgt tcttcgagac ctccgatcag ccgtccgact ggaacatcga
      601 ataccggctc cagctggtca ccacgttctg agcgagagcg atatggaact ctaccgcctg
      661 cgcgatgtgc accgctcgat caagttggcc gcgctgctct ttcttctggt gctgggctac
      721 tcctacatct ttgcctttct gatggtgaag acctggtccg gtctcacgcc gacgaaggta
      781 gcggcgacct acgtgccgaa accgggaatg gacatgtcgg ccatgccgga gcagtcccaa
      841 agcaccacgc aacagctcaa tttggccgag gtcccggaga tgcagcacac ggtggacacc
      901 aacctgctga tccaggacag ccacatccac atcatgatct acgccatcgt cgccgcgctc
      961 gaggcggtca tcatcctggg cctgggctgg ccggggtggt tccgcgacac cgtcatcgtc
     1021 gcggcgttcg gattcggcgc gctggacttc gccgggcagt ggctgatgaa
//
LOCUS       DASRPQ010001610         1589 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2376407, whole genome shotgun sequence.
ACCESSION   DASRPQ010001610 DASRPQ010000000
VERSION     DASRPQ010001610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2376407"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..208
                     /locus_tag="VFD73_18305"
     CDS             <1..208
                     /locus_tag="VFD73_18305"
                     /inference="COORDINATES: protein motif:HMM:NF024252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI75935.1"
                     /translation="RMTPKGLDQVIRTLREKKGFTQEELAFKAKVNPGYVAQLELGLH
                     KNPSLDVVRRLARALGVRLSELLG"
     gene            205..456
                     /locus_tag="VFD73_18310"
     CDS             205..456
                     /locus_tag="VFD73_18310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75936.1"
                     /translation="MTWPMTMADLFKLVLMVVSVAQGVVYVGLALLLVAFIWWVFRMH
                     RHPEWLFYDAIRVVLLAAVLAGVLVAFVPFVRWIRQLTS"
     gene            528..698
                     /locus_tag="VFD73_18315"
     CDS             528..698
                     /locus_tag="VFD73_18315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75937.1"
                     /translation="MTVREQETLLRALDLWREALGAMGWEARAEAALALLIVRDDELE
                     DLRRRIQRGKLQ"
     gene            complement(899..1120)
                     /locus_tag="VFD73_18320"
     CDS             complement(899..1120)
                     /locus_tag="VFD73_18320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75938.1"
                     /translation="MVLHEPLHPIFSHIGFQPRGIGLAQIDQHQAVKSVREIPVHVEG
                     QEFAADLEVLAQQHRDALSVAFDLAPPAL"
     gene            complement(1148..>1589)
                     /locus_tag="VFD73_18325"
     CDS             complement(1148..>1589)
                     /locus_tag="VFD73_18325"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HZI75939.1"
                     /translation="TLAVYVPWTFTRWRMAPPLLGFVPLRILGGLMIAAGLPVLLDCF
                     ARFAIQGLGTPAPVAPPQRLVVTGLYRYVRNPIYVAVVSLIFGQALLFGSVSLLEYGL
                     AVWLGFFVWVLLFEEPTLRGKFSKEYEDYCARVPRWIPRFRASG"
BASE COUNT          314 a          468 c          533 g          274 t
ORIGIN      
        1 aaggatgaca cccaaggggc tcgatcaggt gattcgtacc cttcgggaga agaaaggatt
       61 cacccaggag gagctggcct tcaaggccaa ggtcaacccg ggctatgtgg cccagctcga
      121 gctcgggctg cacaagaacc cgtcgctcga cgtcgtccgg cgactcgccc gagcgctggg
      181 cgtgcggcta tcggagctgc tcggatgacg tggcccatga cgatggccga tctgttcaag
      241 ctggtgctga tggtggtgag cgtggcgcag ggtgtcgtct atgttggact ggccctgctc
      301 ttggtggcgt tcatctggtg ggtcttccgg atgcaccggc acccggagtg gttattctac
      361 gatgcgatcc gcgtcgtgct gcttgcggcc gttctcgcgg gagtgctcgt ggcattcgtc
      421 ccgtttgtcc gctggatccg gcagctcacg agctgaggat ggagcggatg atcgccgcca
      481 tttccgcccg ccggcacccg atcgaaatca ggaggagggc ctgaacgatg accgtgcgcg
      541 agcaggagac gctgctccga gcgctcgatc tttggcgtga ggccttaggc gcaatgggct
      601 gggaggctcg agcggaggcg gcgcttgcct tgctcatcgt cagggacgac gagctcgagg
      661 acctccggcg ccgcatccag cggggaaaac tccagtgatg cggaaggagc gggagcggct
      721 ggcggagtag gtgaagtaaa ggaaggctca gcaactcctg gtgcggaagt tggtcagcgg
      781 gcggatcagg ttcactcctg agctcgagca gaagcgctac cggttcgcgc ctcacacggt
      841 ctgacgattc ccctgctcgg ccgcgtgcgc gcacgggtgg cggcgtaaga tgcgcggcct
      901 agagcgctgg tggcgcgaga tcgaaggcga cggaaagggc gtcccggtgc tgctgcgcca
      961 gtacctcaag atcggcggcg aactcctggc cttcaacgtg cacaggaatt tctctaacgc
     1021 tcttgacggc ctggtgctgg tcgatctgcg caagaccgat cccgcgcggc tggaaaccta
     1081 tatgggaaaa gatggggtgg agaggttcat gcagcaccat ggggaactag ctgctagccg
     1141 ctcgctacta gccgctcgct cggaatcgcg gaatccatcg cggcactcgc gcgcaatagt
     1201 cttcgtattc cttgctgaat ttgccccgca atgtcggttc ctcgaagaga agcacccaga
     1261 caaaaaaccc cagccagact gccagcccgt attcaagcag ggaaacactg ccgaaaagca
     1321 gcgcctgccc gaagatcagc gataccacgg ccacgtatat gggatttcgc acgtaccgat
     1381 ataacccagt gacaaccagc cgctgcggcg gcgcaaccgg ggcgggtgtc cccaggcctt
     1441 gaatagcgaa gcgcgcgaag caatcgagga gcaccggcag ccccgcggcg atcatcagtc
     1501 cgcccagaat tcgcaacggc acaaagccca gcagcggcgg agccatccgc caacgcgtaa
     1561 atgtccaggg gacgtagacg gcgagggta
//
LOCUS       DASRPQ010001611         1443 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1461424, whole genome shotgun sequence.
ACCESSION   DASRPQ010001611 DASRPQ010000000
VERSION     DASRPQ010001611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1443
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1461424"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(175..825)
                     /locus_tag="VFD73_18330"
     CDS             complement(175..825)
                     /locus_tag="VFD73_18330"
                     /inference="COORDINATES: protein motif:HMM:NF027567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HZI75940.1"
                     /translation="MTFRNSPRSTYCLTRPDSLYQHLHPELEIMSQAADRNRKDAPTS
                     KKLEELYSLIEGIEIAMFTTRRPDGHLVSRPMATQTQAEGTDLWFVTDIESHKLDELE
                     FDPNVNLAYYRDGTREWVSVSGHASITQDRRAIHELYRKDWKAWFGDEGGERDGGPDD
                     PRLALVLVDVHSVTYLKVDKPKPLVLFEVAKALVTGTPPKVGAERELSGEEIDRGR"
     gene            1052..>1443
                     /locus_tag="VFD73_18335"
     CDS             1052..>1443
                     /locus_tag="VFD73_18335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75941.1"
                     /translation="MTKTMSTLLPWFALLLVVPVPVQLSAQTLTVPASALADSTARPA
                     AIARLASQAASVYRDSNSLMQMDQEFRLQLLAGHPDPARATLAQLRKVQSARRDTAPA
                     NRALDAQYEIYLRAKQLQSDSTLSFADA"
BASE COUNT          247 a          478 c          452 g          266 t
ORIGIN      
        1 gggccgttca cccgaatcca tcgctcgatc gcggtaaatc gcacggcagt gcgcgccatc
       61 gagacgttcg gcaagggcac ctacgtactc acgctccgcg atggcagccg ggtgctcagc
      121 agctattcct atcgggagaa cgtggcggca ctggtgtgag caccccctgc tgactcacct
      181 cccccggtcg atctcctcgc cgctcagctc ccgctcggcg ccgaccttgg gcggcgtccc
      241 ggtcaccaga gccttggcca cctcaaagag gaccagcggc ttgggtttgt cgaccttgag
      301 ataggtgacc gaatggacgt ccaccagaac gagagccagg cggggatcgt cgggacctcc
      361 gtctcgctcg ccgccttcat cgccgaacca ggccttccaa tccttgcggt agagctcgtg
      421 gatggcgcgg cggtcctggg tgatgctggc gtggccgctc accgagaccc actcgcgggt
      481 gccgtcccga tagtacgcca ggttcacgtt gggatcgaac tccagctcgt ccagcttatg
      541 ggattcgatg tcggtcacga accagaggtc ggtgccctca gcctgggtct gggtggccat
      601 cgggcgggag accagatgcc cgtcggggcg ccgagtggtg aacatggcga tctcgatgcc
      661 ttcgatcaga ctgtagagct cttccagctt cttgctggtg ggagcgtcct tgcgattgcg
      721 gtcggcggct tggctcatga tctccagctc gggatgaaga tgctggtaca gagaatcggg
      781 tcgggtcaga caatacgtcg agcggggtga attgcgaaag gtcacccgtc actgcggagt
      841 gcgatcacgc cattgtccgc agtgatccga tcatcttccg ctttgctgga cgcgaacccg
      901 ctcgacgaga tcgggaagag ccgacaggtc gcacgggtga tggtcggcgc cgttggcagg
      961 cggtcaggtg gtaaggccgg cgacattttc gagcgaaggg agaaatcggg ccggtagcca
     1021 accgtctgcc ggcctccggt gtccaagcca catgaccaaa accatgtcga ctctgctgcc
     1081 ctggttcgct cttctcctgg tagttccggt gccggtccag ctcagcgcac agaccctcac
     1141 ggtccctgct tccgccctcg ccgactcaac cgcccggccc gccgcaattg cgcggctcgc
     1201 gagtcaggcc gcctcggtgt accgagacag caattccctc atgcagatgg accaagagtt
     1261 ccggcttcag ctcctggccg ggcacccgga tccagcccgc gccacgctgg cacagctccg
     1321 gaaagtccag tcagctcggc gcgacacggc accggccaac cgagcgctgg atgcccaata
     1381 cgagatctac ctccgggcga agcagctcca gtcggactcc acgctctcct ttgccgacgc
     1441 ctt
//
LOCUS       DASRPQ010001612         1434 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3952309, whole genome shotgun sequence.
ACCESSION   DASRPQ010001612 DASRPQ010000000
VERSION     DASRPQ010001612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1434
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3952309"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..241)
                     /locus_tag="VFD73_18340"
     CDS             complement(<1..241)
                     /locus_tag="VFD73_18340"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI75942.1"
                     /translation="MVSSEDSAWDVPPSIFGTRAGGPTVQRLVLGNQLHRLRESRGIT
                     AEQAAEAIRGSHSKISRMEHGRVGFKERDVGDLLTL"
     gene            complement(440..697)
                     /locus_tag="VFD73_18345"
     CDS             complement(440..697)
                     /locus_tag="VFD73_18345"
                     /inference="COORDINATES: protein motif:HMM:NF016070.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF397 domain-containing protein"
                     /protein_id="HZI75943.1"
                     /translation="MVITYNGMLAAELGEVRWQKSWHSNPNGECVELAALPTGEIAMR
                     NSRFPAGPVLLYTQAEITAFLAGAKDGEFDHLTGGTNHLTR"
     gene            940..>1434
                     /locus_tag="VFD73_18350"
     CDS             940..>1434
                     /locus_tag="VFD73_18350"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI75944.1"
                     /translation="MPNDMQEAVALAHLSVATGSGDDDEEVSIGWPAVSDGMPRLLPV
                     PSAWWETPAVTTRALSARPEEARTARRFVREILTCWGLEALADDAEMIVDELVVNAVL
                     HGTRAGLTRPSPGAGLTVLRLCMLRRAGEVMLAVVDPGNETPMPRKPDWGGESGRGLQ
                     IVGAL"
BASE COUNT          246 a          442 c          471 g          275 t
ORIGIN      
        1 agagggtaag gaggtcgccc acatcgcgct ccttgaagcc gacccggcca tgttccatcc
       61 ggctgatctt ggagtgcgag ccgcggatgg cttccgcagc ctgctcagcg gtaattcccc
      121 gcgactcgcg cagccggtgc aactggttgc cgagcactag ccgctggacg gtcgggccgc
      181 ccgcgcgcgt gccaaaaatg ctggggggaa cgtcccaggc cgagtcttca gacgagacca
      241 tcggcactcc tcgcatcgtc gcaccctgga tcctggcggg ggtgtggacc agtctcccat
      301 gtgatctcgc gcttacggaa gggggatatg tgactattca aaagacgtcg tgatccctcc
      361 gcgtttgcgc aggtcgcaag ataccagttt gccaggcttc aactctcgag tcgccgcttg
      421 ccggacggta gcactgttac tagcgagtaa gatggtttgt tccaccggtt agatggtcga
      481 actccccatc cttggctcct gccaggaatg cggtgatctc tgcttgagtg tagagcaaga
      541 cagggcccgc cgggaaacgg gagttgcgca tcgctatctc gccggtcggc agcgcggcca
      601 gctcgacgca ctccccgttc gggttgctgt gccagctctt ctgccagcgg acctctccga
      661 gctctgcggc gagcatgccg ttgtacgtaa tgaccatgtt tatccccttc cgacagggta
      721 acgcacgcca ggccgccata gttcactcac tgtagtctcc agttagcaac tggtgatcaa
      781 gttgcctgat gcgttccgcc tgtccgccgg ccccctatgc gcctactcgg agacctgtgc
      841 acaaagcgaa tgaacgtgca tctggtcttg catttgcaca atatatcagg cagcatgtct
      901 ttaagcacgc agttaacacc gtgatgggca ggggttttcg tgcccaatga catgcaggaa
      961 gctgttgcgt tggcgcatct cagtgtcgct accggtagcg gggatgacga tgaggaagtc
     1021 agcatcggat ggcccgcggt aagtgacggc atgccacggc tgctgcctgt gccttctgcc
     1081 tggtgggaga ccccggccgt taccacccgc gcgctcagcg cccggccgga ggaagccagg
     1141 accgcccgcc ggttcgtccg ggagatactg acctgctggg gcctagaggc gttggcggac
     1201 gacgccgaga tgatcgtgga cgagctggtg gtcaacgccg tcctgcacgg gacacgggcg
     1261 ggcctgaccc ggccgagccc cggagccggg ctcaccgtgc tgcggctgtg catgctcagg
     1321 cgggccggcg aggtcatgct ggcggtggtg gatccgggca acgagacgcc catgcccagg
     1381 aagcccgact ggggcgggga gagcgggcgc ggcctgcaga tcgtgggcgc cttg
//
LOCUS       DASRPQ010001613         1844 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_813333, whole genome shotgun sequence.
ACCESSION   DASRPQ010001613 DASRPQ010000000
VERSION     DASRPQ010001613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1844
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_813333"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..982
                     /locus_tag="VFD73_18355"
     CDS             <1..982
                     /locus_tag="VFD73_18355"
                     /inference="COORDINATES: protein motif:HMM:NF015588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyl hydrolase family 65 protein"
                     /protein_id="HZI75945.1"
                     /translation="GAEILFETSRFWASRLEAMPDGRYALSRVVGPDEFHEHVDNSAY
                     TNYLVRWHLQRAAHVYAGLAVTHPGELAGLAERIGLKPDEVEGWLTRAEQIRLPAQRD
                     DGVIEQFDGCFGLETLPVTHDDNDMPVYTPGYHHYNLAGTKLVKQADVVMLTYVLPDE
                     FPDEIKRANYDYYEPLTLHKSSLSTAIHAIMGIEVGDPRRAVQYFRQSAFVDLIDNQG
                     NTSEGIHIASAGGTWQTIVCGFGGFRVRNGQMTFKPWLPPDWKAVDFRLKWHGNTVSV
                     FADHTSATFVLSGPKDRRETIIVNGHEITLQANTKVTVDLLQARPRQPGA"
     gene            complement(1241..1468)
                     /locus_tag="VFD73_18360"
     CDS             complement(1241..1468)
                     /locus_tag="VFD73_18360"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HZI75946.1"
                     /translation="MATSLQVEPNPAFERDRHLRRVLAKYAWHYNDHRPHQSREQRPP
                     LHEPGQPVDVTARITRRQVIHGLINEYHRAA"
     gene            complement(1627..>1844)
                     /locus_tag="VFD73_18365"
     CDS             complement(1627..>1844)
                     /locus_tag="VFD73_18365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75947.1"
                     /translation="NGAGACPKIGQTATWADTNLGASESSAFPEGDIWPSGGNVNPAV
                     HMYMNSPPKGQPFSKVCWTLPNEITIS"
BASE COUNT          324 a          569 c          606 g          345 t
ORIGIN      
        1 cggcgccgaa atcctcttcg agacgagccg gttctgggcc agccgcctgg aggccatgcc
       61 ggacgggcgg tacgcgctga gccgggtggt cggccccgac gagttccacg agcacgtcga
      121 caacagcgcc tacaccaact atctggtgcg gtggcacctg cagcgagccg cgcacgtcta
      181 tgccggtctc gcggtcaccc accccggcga actggccggc ctggccgagc gcatcgggct
      241 caagccggat gaggtcgaag ggtggctcac ccgggccgag cagatccgcc tgcccgccca
      301 gcgcgacgac ggagtgatcg agcagttcga cgggtgcttc gggctggaga ccctgccggt
      361 aacccacgac gacaacgaca tgccggtgta cacgcccggt tatcatcact acaacctggc
      421 gggaaccaag ctggtcaaac aggccgacgt ggtgatgctg acctacgtgc tcccggacga
      481 gtttccggat gagatcaagc gcgccaacta cgactactat gagccgctga cgctgcacaa
      541 gtcatcgctc agcaccgcga tccacgccat catgggcatc gaggtcggcg acccgcggcg
      601 cgctgtccag tacttccgcc agtcggcatt cgtcgatctc atcgacaacc agggcaacac
      661 cagcgagggc attcacatag cgtccgcagg cggaacctgg cagacgatcg tctgcggatt
      721 cggcggattc cgggtgcgga acggccagat gaccttcaag ccgtggctcc cgcctgactg
      781 gaaggctgtg gacttccggc tcaagtggca tggcaacacc gtgtcggtgt ttgccgatca
      841 cacctccgcg acgttcgtac tgtcgggtcc gaaagaccgt cgtgagacga tcatcgtcaa
      901 tgggcacgag ataacgctcc aggccaacac caaagtaacg gtcgacctgc tgcaagcacg
      961 acctcgacag cctggcgcct gacgcggccc ggacagtgat ggttgaggtg gcccgcacga
     1021 ccggcaactg ccctgtaccg ctccataact tgccgcaggt gctgtgagct gcggtttggc
     1081 ccggtgggta gattacggca ggatcgcggt tcatgtgcgt tcggctgctg tacctgatca
     1141 tggtccgggt cttgggctgg ctggtgctgc tgggccgcag tcaggcctgt gccgtgccag
     1201 aactcgcgca ctgtctctga gctggtgttt tctgcgatac ttaggctgct ctgtggtact
     1261 cattgatcaa gccgtggatg acctgcctgc gcgtgatccg ggcagtcaca tcgaccggct
     1321 gaccgggctc gtgcagcgga ggtcgttgtt cccgcgactg gtgcggccga tgatcgttgt
     1381 aatgccacgc gtacttggcc aggacccgcc ggaggtgcct gtcccgctcg aaagcaggat
     1441 tgggctcgac ctgcaggctg gtagccaacc atcacggagt ccaggctgct ggcgatggcg
     1501 caggtcagcc gctcaatcga tttttcgagc gacacaggga cgctgatgat cggcagctac
     1561 ggggggtagc gctcgcgccc gggcgggcag gcccagccgg gcgcgaggat cggtatgact
     1621 cgctgtttaa cttatggtga tctcgttggg cagggtccag cagacttttg aaaaaggctg
     1681 gcctttcggc gggctgttca tgtacatgtg cacggctggg tttacgtttc cgccggaggg
     1741 ccagatatcc ccttcgggga aggcggatga ttctgaagcg ccgagattcg tgtcggccca
     1801 ggtcgcggtt tgcccgattt tgggacaagc gcctgccccg ttgc
//
LOCUS       DASRPQ010001614         1424 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2732190, whole genome shotgun sequence.
ACCESSION   DASRPQ010001614 DASRPQ010000000
VERSION     DASRPQ010001614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1424
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2732190"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1404
                     /gene="bshC"
                     /locus_tag="VFD73_18370"
     CDS             <1..1404
                     /gene="bshC"
                     /locus_tag="VFD73_18370"
                     /inference="COORDINATES: protein motif:HMM:TIGR03998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0071793 - bacillithiol biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis cysteine-adding enzyme
                     BshC"
                     /protein_id="HZI75948.1"
                     /translation="ERLHQPDAFVLTSGQQPGLFTGPLYTVYKALSTAGLARVLERQW
                     QRPVVPIFWIAGDDHDFAEASRASWITADGTVRTAQLSPRANDAPLTPMYRELLGSGI
                     TTLLDQLASDLPVSEFREATLEWLGRHYRPDATIAGSFAGALAELLAPAGVVCLESTH
                     PAAKRAAAGYLVRALGLARELNRDLSRHAEDLQSAGLELTVTLDEQATLVMVEGALGR
                     DRLLVDADGFVTRRSRERFTLNALAALAAAQPERLSPNVLLRPVIESALLPTVAYLAG
                     PGELSYLPLTRPIYERMRVPRQAVLPRWSGVLVEPRVDRVLRKFDIDLMDLLQPPGAL
                     EARLVRSQLPDQASRALDSLRQALASGYDELARSAGEIDPTLTRPVQGAKHQAVSSLQ
                     DIERKLIQHLKRRQETELGQLAKARTLVHPEGQPQERLLTVAPFLARYGPSLITELLE
                     TIEGWYASALEGALHPS"
BASE COUNT          249 a          471 c          453 g          251 t
ORIGIN      
        1 gaacgcttgc accagcccga cgccttcgtc cttaccagcg ggcagcagcc gggactcttc
       61 accggtccct tatatacggt ctacaaggcg ctctccacgg caggactggc gcgcgttctc
      121 gagcgacaat ggcagcgccc ggtcgtgccg atattctgga ttgcgggcga tgaccatgac
      181 ttcgctgagg caagcagagc gagctggatc acggccgatg ggacagtgcg gacggcgcag
      241 ctttcgccac gggcaaacga tgcccctctc accccgatgt accgtgagct gctcggtagc
      301 gggattacca cactgctgga tcagctggct tccgatctac cggtctcgga gtttcgggaa
      361 gcgactctgg agtggcttgg ccgacactat cggcccgacg ccactatcgc cggcagcttt
      421 gccggagccc tggcggagct tctggcgccg gcgggggtgg tctgcctgga aagcacccat
      481 cctgcggcga agcgcgccgc agccgggtac ctggtgcgag cactgggact cgcacgcgag
      541 ctcaatcggg acctcagccg gcacgccgag gatcttcaat cagccggcct ggagctgacg
      601 gtgacgctgg acgagcaggc caccctggtt atggtggagg gagcgctcgg ccgcgatcgc
      661 ctgctggtcg atgccgacgg gtttgtcacc aggcggagcc gcgagcgttt caccctcaac
      721 gccttggcag ctctcgcggc tgctcagccg gagcgactct cgccgaacgt gctgctccgt
      781 cccgtgatcg aaagcgcgtt gctgccaacc gtggcctatc tggccggacc cggagagttg
      841 agttatctgc cgctcacccg gccgatttac gagcgcatgc gagtgccgcg gcaagcggtg
      901 cttccccgct ggtccggggt gttggtggaa cccagagtgg accgtgtgct ccggaaattc
      961 gacatcgatc tgatggatct gctgcagccg cccggtgcgc tcgaagcacg tctggtccgc
     1021 tcccaactgc cggaccaggc ttcccgcgca ttggattcgc tgcggcaagc acttgcctcc
     1081 ggctacgacg agctcgcccg aagcgccggg gaaatcgatc ctaccctgac ccgcccggtg
     1141 cagggggcca agcatcaggc cgtttccagc ctccaggaca tcgaacgcaa gctgatccaa
     1201 cacctgaaac ggcgtcagga aacggaattg ggacagctcg caaaggccag gacactggtt
     1261 caccccgagg gccagcccca ggaacgcctg ctcaccgtgg caccgttcct ggcccgctat
     1321 ggtccgtcac tgatcaccga gctgctggaa acgatcgagg gatggtacgc gtctgccctt
     1381 gaaggggcac ttcacccttc atagactcga cccatgtcag tgat
//
LOCUS       DASRPQ010001615         3032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3952825, whole genome shotgun sequence.
ACCESSION   DASRPQ010001615 DASRPQ010000000
VERSION     DASRPQ010001615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3032
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3952825"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..802)
                     /locus_tag="VFD73_18375"
     CDS             complement(<1..802)
                     /locus_tag="VFD73_18375"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HZI75949.1"
                     /translation="MNNPAISESAGPRVLLVGDASARPEGLERALTRAGFHLVEQEDP
                     HTCPELDAIVITLRGITNGTPTSLFASPQRGMPPRIVLLASADPDGPAHALALGAADA
                     LAAPIHFPELCARLSTRIQEHRASSANGAASNDSDVEQLAEGSPKSRDTEESDILESR
                     VREEFARARRYSLSFSLILLGVDDLSTSEERMGTEAAARLRTEVARTLRKELRAPDLV
                     AAFSPAEFAIVLPETGESGARQSVLRLRERLTSLPFEGDPRLEPTRFSA"
     gene            819..1694
                     /locus_tag="VFD73_18380"
     CDS             819..1694
                     /locus_tag="VFD73_18380"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016888 - endodeoxyribonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HZI75950.1"
                     /translation="MQHRRVSEYLGAHVSVQGGVHRAPVRGKAIGATAIQVFTKTPGQ
                     WREPDIGPESLTAFKAECERLQLTNIVAHDSYLINLASPDPTLSARSAASFVEELRRC
                     EAYGISYLVSHPGNYIEDRNAGLSRNAAAYTRCLRAVPGRVMVLLETTAGCGTALGST
                     FEELGILRSLVGDDVRHRIGFCADTCHLYSAGYDLAGDYDGVWRRWDQILGLEQLRCL
                     HLNDSKTPFASCRDRHELIGEGSLGPVPFRRIMTDPRFHNVIKILETPKGDDEVTADR
                     KMLRRLRRYASVRSR"
     gene            1727..2323
                     /locus_tag="VFD73_18385"
     CDS             1727..2323
                     /locus_tag="VFD73_18385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75951.1"
                     /translation="MRTLLCTIASLALLVSPAQSQVAYYGRLGLTASTKLIRDAVVQE
                     IDVQPGLAPTIVLGASVPFAPTYQAGLEASLTSSGFHSSELGVETDLGTLRTGSLLLN
                     LEGPLAPRLSWRGGFGVIRYWPADQEGIFLRGGTSRFLAGAGMDYLAPLLASWDLMIS
                     LRYDFHRFTTDELSARGFSGSQGVQRLSLSAGLARARR"
     gene            2320..2982
                     /locus_tag="VFD73_18390"
     CDS             2320..2982
                     /locus_tag="VFD73_18390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75952.1"
                     /translation="MKIPAALPILGILIASISCADIASPTRSNAYEWRRIEPAGPGTA
                     ETLSFHWPASRLPVKVWAEDTLNLPAKVQAGIDKWKAAFLYREYDAVTVADSNLADVV
                     VRLAPPSKLTLDVVRMRALAPECEGATDFDLPSGSRELQVPVRVFVNPRFDPASPGVD
                     QCLALTVTHEMGHTIGIFDHSPSSSDIMFFDPVVSDLSASDRATAELVYHTSPNVTVS
                     PR"
BASE COUNT          545 a          959 c          944 g          584 t
ORIGIN      
        1 ccgcactgaa ccgagtgggc tcgagtcggg gatctccttc gaaggggagg ctcgtgagcc
       61 gctcgcgtag gcgcagcacc gactgacggg cgcccgactc tcctgtctcc ggaaggacga
      121 tcgcgaactc ggccggcgaa aaggcagcga ccagatcagg cgctctgagc tccttgcgga
      181 gcgtccgggc cacttcggta cgaagccggg cagcagcctc ggttcccatc cgttcctcgg
      241 acgtggaaag atcgtctacg ccgagcagga tcaggctgaa gctcagggag tagcggcgcg
      301 cccgcgcgaa ctcctcccgc acccggctct ccaggatgtc ggattcctcg gtgtccctcg
      361 atttcggcga accttcggcc agctgttcga catcggagtc gttcgatgca gcgccgttcg
      421 ctgagcttgc gcggtgctcc tgaattcggg tcgaaaggcg ggcacagagc tcgggaaagt
      481 gaatgggcgc tgcgagcgcg tccgccgcgc ccagggcgag cgcatgagcg gggccgtcgg
      541 ggtcggcact agccagcagc acgatccggg gaggcatacc gcgctgcggg ctcgcgaaga
      601 gggaggtcgg tgtaccatta gtaatgccgc gaagggtgat aacgatggca tccaactccg
      661 gacaggtgtg cggatcctcc tgttcgacca gatgaaaccc cgcgcgggtc agcgcccgtt
      721 cgagtccttc cggccgcgca gacgcatcgc ccaccagaag aactcgcgga ccggcagatt
      781 cggaaatagc cggattgttc acatcaacga gggtgtaaat gcagcacagg cgggtctcgg
      841 agtatctggg cgctcatgtc tcggtccagg gtggcgttca ccgggctccg gtgagaggca
      901 aggcaatcgg tgccacagcg attcaggtct tcaccaagac gccgggacaa tggcgtgagc
      961 cggacattgg tcccgagtcg cttaccgcct tcaaagcgga gtgcgagcgg ctccagctca
     1021 ccaatatagt ggcgcatgat tcgtacctta tcaacctcgc ctcccccgac cccaccttaa
     1081 gtgctcgttc agcggcctct tttgttgagg agctgcgccg atgcgaggcg tacggaatca
     1141 gctatctggt gtcgcacccg ggcaactaca tcgaagaccg aaacgcaggc ctctcccgca
     1201 atgcggcggc ctacactcgg tgcttacggg ccgtgccggg aagggtcatg gtgctcctgg
     1261 agacgactgc cggctgcgga accgcattgg ggagcacctt cgaggagctc ggaatccttc
     1321 ggagcctggt tggcgacgat gtacgccacc gcatcgggtt ctgtgccgac acctgtcact
     1381 tgtattccgc ggggtacgat ctggccgggg actacgacgg ggtctggcga cgctgggatc
     1441 agattttggg cctcgagcag ctgcgctgtc ttcatctcaa cgattccaag acaccttttg
     1501 catcctgtcg agaccgccac gagctgattg gcgagggttc gctgggaccg gtgccgttcc
     1561 gccggatcat gaccgatccc cgctttcaca acgtcatcaa aattttggaa acgccgaaag
     1621 gggacgacga ggtcaccgcc gaccgaaaaa tgttgcggcg gctgcgccgc tatgccagcg
     1681 tgcgatcgcg ttgaccggcc ctttcgaccc acccatacta cgccgaatgc gcaccctcct
     1741 gtgcaccatc gcatcccttg ccctgctcgt ttcccccgcc cagtcgcagg tagcctacta
     1801 tggacgcttg ggtctgactg cctcgacgaa gctgatccgt gacgccgtgg tccaggaaat
     1861 cgatgtgcaa ccgggtctcg cgcctaccat cgttctgggg gcctcggttc ccttcgcgcc
     1921 cacctaccaa gccggtttgg aagccagtct caccagctcg ggatttcaca gctctgagct
     1981 cggcgtcgaa accgatttgg gcaccctacg aaccggttcg ctcctcctta atctggaggg
     2041 accactggca ccccgcctat cctggcgtgg aggcttcgga gtgatcagat attggccggc
     2101 agaccaggag gggatcttcc tgcgcggcgg caccagccgg tttttggccg gcgcggggat
     2161 ggactacctg gccccgctgc tcgccagctg ggacctgatg atctccctcc gctatgactt
     2221 tcatcgattt accaccgatg agctctccgc tcgaggcttc agcgggagcc agggagtgca
     2281 acgcctatca ctctccgccg gtttggcccg ggcccggcga tgaagatacc cgccgcgttg
     2341 ccgatacttg gtatcctgat tgcgagtatt tcctgcgccg atattgcatc gcccacccga
     2401 agcaacgcgt acgagtggcg gcgcattgag cccgccggac caggcaccgc tgaaaccctc
     2461 agctttcatt ggccggcttc ccggttgccg gtgaaggtct gggcggaaga cacgctgaac
     2521 ctgccggcga aagttcaggc tggaatcgat aagtggaagg ctgcttttct ctatcgtgag
     2581 tacgatgcgg taacggtggc cgattcgaac ctggccgatg tagtggttcg gctggcccca
     2641 ccgagtaagc tgaccttgga cgtcgtgcgg atgcgcgcgc tcgcacccga atgtgaagga
     2701 gcaacggact tcgatctgcc gagcggctct cgagagttgc aggtgcccgt ccgggtgttc
     2761 gtgaatccga gattcgatcc cgcgagtcca ggggtcgacc aatgcctggc tctgactgtc
     2821 acccacgaga tgggccacac catcggcatc tttgaccatt cgccatcgag ctcggacatc
     2881 atgttcttcg acccggttgt ttccgatctc agcgccagcg accgcgcgac cgcagaactg
     2941 gtttatcaca ccagccccaa cgtgactgtg tcaccgcgat gaggttgcac ccgggggacc
     3001 agggattgat ctttcgcgac tcgacccggc tc
//
LOCUS       DASRPQ010001616         1929 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3004678, whole genome shotgun sequence.
ACCESSION   DASRPQ010001616 DASRPQ010000000
VERSION     DASRPQ010001616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1929)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1929)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1929
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3004678"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..291)
                     /locus_tag="VFD73_18395"
     CDS             complement(<1..291)
                     /locus_tag="VFD73_18395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75953.1"
                     /translation="MTGPATRTALQRIGRPLQGRSQLAWSALAVGAVALLLGGAAWLV
                     RLGWITVPYWVLAAWGIAIVAAVVVSYLGWENQRRFTAPRLARGLEEIGAWRA"
     gene            complement(288..953)
                     /locus_tag="VFD73_18400"
     CDS             complement(288..953)
                     /locus_tag="VFD73_18400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4159 domain-containing protein"
                     /protein_id="HZI75954.1"
                     /translation="MSRVLILLASVLSFPFSLRTPAPTMTIGRLHYDGGGDWYANPSS
                     LPNLLSALRTRTALRIASEEKVIKLSDDDLWNIPYIYMTGHGNVHWSDQDLATLRRYL
                     EQGGFLHADDNYGMDASIRRELGRLFPDHPLVEVPLDHPIYHLVYDFPKGIPKIHYHD
                     GKPAQGFGIFLNGRLAVYYSYQSDLGDGWEDPEVHHDPPEKREAALRMGVNLFAYAVG
                     YGG"
     gene            complement(956..1792)
                     /gene="rsmI"
                     /locus_tag="VFD73_18405"
     CDS             complement(956..1792)
                     /gene="rsmI"
                     /locus_tag="VFD73_18405"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: protein motif:HMM:TIGR00096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HZI75955.1"
                     /translation="MHPGTLYIVATPLGNLGDLSHRAAEVLQGVPVVAAEDTRRTRAL
                     LSHLGAHPTLLSFHAHSGNRRAESLLEILRSGRDVALVSDAGTPAVSDPGADLVHQAR
                     AAGYPIVPIPGPSAVAVALSASGFNGDRYLFLGFIPRKGRERARLLTRAAAEEWSTVF
                     FEAPSRVVHLLEDLRDRVGPDRLVVVARELTKIHEDIRSGTLDAMVEYFTSAPVKGEL
                     TVVLQGTGSPEPEADRTEDALEQATSLLAEGLTRREVVRRLTETLGIPRNDAYRLVME
                     LP"
BASE COUNT          367 a          591 c          646 g          325 t
ORIGIN      
        1 agcgcgccag gcgccgattt cctccagacc gcgggcaagc cgaggtgcgg tgaagcgtcg
       61 ctggttttcc cacccgagat aactcacgac gacggccgcc acgatcgcta tgccccaggc
      121 agcgagaacc cagtagggca ccgtgatcca gcccagccgc accagccacg ccgctccccc
      181 gagcaagagc gctaccgctc cgacggcgag agcggaccat gcaagttggc tccgtccctg
      241 aagcgggcgg ccaatgcgct gcagcgcggt gcgggtggcg gggccggtca tccgccgtaa
      301 cccaccgcgt aggcgaagag attgacaccc atacgaagcg cggcttcccg cttctccgga
      361 ggatcgtggt gcacttcggg gtcctcccag ccatcgccca gatcggactg ataggagtag
      421 tacaccgcca agcgtccgtt gaggaagatt ccaaaaccct gggccggctt tccgtcgtgg
      481 taatgaattt tgggaattcc cttgggaaag tcgtacacca ggtgatagat cggatggtcc
      541 agcgggacct cgaccagcgg atggtcggga aagagacgtc ccagttcacg cctgatcgaa
      601 gcatccatgc catagttgtc gtcggcatgg aggaatccgc cctgttccag gtaacggcga
      661 agcgtggcga gatcctgatc gctccagtgc acgttgccgt ggccagtcat gtaaatgtac
      721 gggatgttcc acagatcatc gtcgctcagc ttgatgacct tctcctcgct tgcaattcgg
      781 agggcggtgc gagtccgcag cgccgatagc aggtttggaa ggctggatgg gttcgcgtac
      841 cagtccccac cgccatcgta gtgcagccgt ccgatggtca tggtcggcgc gggagtgcgc
      901 aacgagaaag gaaagctgag gacggatgcg aggagaatga gaacccgcga catggtcagg
      961 ggagctccat cacgagacgg taggcgtcgt ttcgagggat gcccagcgtt tcagtgagac
     1021 ggcgaaccac ctcacggcgg gtaaggccct cagccaggag agaagtggct tgctccagcg
     1081 cgtcttcggt acgatccgcc tcaggttccg gcgagccggt cccctggagc accactgtca
     1141 gttcgccctt caccggcgca cttgtaaagt actcgaccat ggcatccaga gtgccgctcc
     1201 ggatgtcctc gtgaatcttg gtaagctcgc gggccacgac gacgagacgg tccggcccga
     1261 cgcggtcgcg gagatcttcc aacaggtgga cgacgcggga gggagcctcg aagaacacag
     1321 tggaccactc ctcggccgcg gccctggtca gcagccgggc ccgttcccgg ccttttcgtg
     1381 gaatgaaccc gaggaagagg tagcgatcgc cgttgaatcc ggaggcagat agcgccaccg
     1441 ccactgcgga gggccccggg atgggaacga tcgggtaccc ggccgcacgg gcttgatgca
     1501 ccaggtctgc gcctgggtcg ctgacagccg gggttccggc gtcggacacc agcgctacgt
     1561 cgcggccgga gcgcaggatc tccagcaagg attcggcacg acgatttcct gaatgagcat
     1621 ggaaactgag cagcgtcggg tgggcgccca gatggctcag gagcgcgcgg gtccggcggg
     1681 tatcttcggc cgcgacgacc ggaaccccct ggagaacctc agcggctcga tgcgagaggt
     1741 cacccaagtt gccgagcggc gtggcgacga tgtagagcgt accagggtgc atgcggggat
     1801 cggggtgtga cgggaaaggc gggaagagag tcgtgtctct tcccgccctt cttgcggtcc
     1861 ggcttgcccg tccttacgac aggtgctgct tgatcttccc ttccagcgtg gccttgggaa
     1921 cggcgccca
//
LOCUS       DASRPQ010001617         2451 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2377173, whole genome shotgun sequence.
ACCESSION   DASRPQ010001617 DASRPQ010000000
VERSION     DASRPQ010001617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2451
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2377173"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..673)
                     /gene="bshA"
                     /locus_tag="VFD73_18410"
     CDS             complement(<1..673)
                     /gene="bshA"
                     /locus_tag="VFD73_18410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0071793 - bacillithiol biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-alpha-D-glucosaminyl L-malate synthase
                     BshA"
                     /protein_id="HZI75956.1"
                     /translation="MKIGITCYPTYGGSGAVATELGLDLARRGHQVHFITYDSPFRLR
                     GYAERVFFHQVETRMGRYPLFDHYPYTLALASKQHEVVLRERLEVLHVHYAIPHATTA
                     YLAREMLNGEWPLKVITTLHGTDITLVGQESSFYGITKFSIEQSDAVSAVSTYLRDET
                     YRAFGCGNCDVRVIPNFVNLQEYRPGEPGCRDRLAPEGHKLITHVSNFREVKRVKDVI
                     RVFARI"
     gene            complement(670..1599)
                     /gene="miaA"
                     /locus_tag="VFD73_18415"
     CDS             complement(670..1599)
                     /gene="miaA"
                     /locus_tag="VFD73_18415"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: protein motif:HMM:TIGR00174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HZI75957.1"
                     /translation="MAGARVPVILGPTAVGKTAVALALTAHWDHEIISADSRQVYRRL
                     DIGTAKPTRKERARVPHHGIDLIEPGSRYSAGHFARDAAGWLVDIAGRGKQAVIVGGT
                     GLYVRALAEGLFTEPALDPARRRSLDAWTARLEPIELLRWAARLDPGFGGGGRQRAAR
                     AIEIALLSGRPLSYWQEAARSKGSLDPWYIVLTVPRPVLHQRISRRAEEMVRRGLIEE
                     VAAVLAEGHDAGSPGMDGIGIREAVEYLHGKRTRDTVADAIAVDTRQYAKRQQTWFRH
                     QLGGNTICLDATRPPEKLASEIAKLWERELAAR"
     gene            complement(1586..>2451)
                     /locus_tag="VFD73_18420"
     CDS             complement(1586..>2451)
                     /locus_tag="VFD73_18420"
                     /inference="COORDINATES: protein motif:HMM:NF020260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75958.1"
                     /translation="PSIYLRIEVAPEDVDVNVHPAKLEVRFRDRIGVERVVEEAVRSA
                     LGALVAAVAVGDWRGLPAGTEFGTAGSELVDMGQLFGPEIESEQNDAASPGTGGFEAP
                     LLQVFDTYILYQGPDAVIIVDQHSAHERVLYEAVMAQLRGIGAPAQRLLLPLTVELTD
                     EELDAVEAHGEQLRCVGFEVEGFGGRSVVVHAVPAPHPRFDAETCFREMVADLARGRF
                     GGWANRLERFAATYACRAAVKAGERLEQREMRELLLRLFTTDLPPHDVHGRATIVQLP
                     REELERRFGRR"
BASE COUNT          447 a          828 c          743 g          433 t
ORIGIN      
        1 gaatccgggc gaatacccga atgacgtcct tcacgcgttt cacctcacgg aagttcgaca
       61 cgtgagtgat cagtttgtga ccctcgggtg ccagccggtc ccggcatccc ggttcgccgg
      121 gccgatactc ctggaggttg acgaagtttg ggatcacccg gacgtcacaa ttgccgcagc
      181 caaacgcgcg ataggtctcg tcccggagat aggtcgacac cgctgagacc gcgtcggact
      241 gctcgatcga aaatttggtg attccgtaga agctcgactc ctgtcccacc agggtgatgt
      301 cggtgccgtg caacgtggtg atgaccttga gaggccattc gccgttcagc atctcccggg
      361 cgagatacgc cgtggttgcg tgcgggatgg cgtagtgcac gtggagcact tccagccgtt
      421 cccgcaagac aacctcatgt tgtttcgacg cgagagccag ggtgtacggg tagtgatcga
      481 acaagggata gcggcccatc ctggtttcga cctgatgaaa aaacaccctc tccgcgtaac
      541 cccgcaggcg aaacggcgaa tcgtaggtga tgaagtgcac ctgatgaccg cggcgggcga
      601 ggtccaggcc cagctcggtt gccaccgcgc ctgacccgcc gtacgtgggg taacaggtga
      661 tgccgatttt catcgggctg ctagctctct ctcccacagt ttcgcgatct cggatgccag
      721 cttctcaggc ggccgggttg catccaggca tatggtattc ccgcccagct gatggcggaa
      781 ccaggtttgc tgccgcttcg cgtactgccg ggtgtccact gcgatcgcgt cggcaacagt
      841 gtcgcgagtg cgctttccat gcagatactc gaccgcctcc cgaatgccga tgccatccat
      901 gcccgggctt ccggcatcat gtccttccgc cagcactgct gccacctctt cgatcaatcc
      961 ccggcgcacc atctcttctg ctcgacgcga gatccgctgg tgcaagaccg gtcgagggac
     1021 agtcagaaca atgtaccatg ggtcgagcga tcctttactc cgcgcggcct cttgccagta
     1081 ggagagcggc cgcccactca gcagtgcaat ttcaatggcg cgagccgccc gttggcgtcc
     1141 gccgccgcca aaccccggat ccagtcgagc cgcccagcgg agcaactcga tcggctccag
     1201 tcgagcagtc caggcgtcca gcgaacgccg ccgggccgga tcgagagccg gctccgtaaa
     1261 gagcccctcg gcaagcgctc ggacatagag accggttccc ccaacgatga ccgcttgctt
     1321 gccccggccg gcgatatcga ccagccagcc ggcggcgtct cgagcgaagt gtcccgcgct
     1381 gtagcgggac cctggttcga tgagatcgat gccatgatga ggaacgcggg cgcgctcctt
     1441 tcgggtgggt ttggcggtcc cgatatccag gcggcgatag acctgacgtg aatcggcgga
     1501 aatgatctcg tggtcccaat gcgctgtgag ggccagggca accgcggtct tccccaccgc
     1561 cgttggaccg aggatgaccg gtaccctagc gccggccaaa ccggcgctcc agctcctccc
     1621 gcggcagctg cacgatggtg gcccgtccgt ggacatcgtg cggaggaagg tcggtggtga
     1681 acagacgcag cagaagctcc cgcatctccc gctgctccag tcgctctccc gccttgaccg
     1741 cggcgcggca ggcataggtc gctgcaaacc gctccagccg attggcccag ccaccgaacc
     1801 tgccgcgcgc gagatcggca accatctcgc gaaaacaggt ttccgcatcg aagcgagggt
     1861 gcggcgccgg aacggcatgc accacgacgc tgcgcccacc gaacccctcg acctcgaagc
     1921 cgacgcaacg aagctgttcc ccgtgagcct cgaccgcatc cagctcttcg tcggtgagct
     1981 cgacagtaag cggaaggagc agccgctggg ccggcgctcc gatacccctg agctgcgcca
     2041 tcaccgcttc gtagagcact cgctcgtgcg cggagtgctg atcgacgatg atgactgcat
     2101 cgggaccttg gtagaggatg tatgtgtcga acacctgcag gagtggcgcc tcgaagccgc
     2161 cggtgcccgg acttgcagcg tcgttctgtt cgctctcgat ttcagggccg aacagctggc
     2221 ccatgtcgac cagctcggag ccggcagtcc cgaactcagt cccggctggg agacctcgcc
     2281 agtcaccgac cgccaccgca gccaccaacg ccccgagcgc cgaacgcact gcttcctcca
     2341 ccacccgctc cactccgatc cgatcgcgaa accgcacctc gagctttgcc ggatgcacgt
     2401 ttacatcgac gtcctccggc gcgacctcga tccggagata gatcgagggt c
//
LOCUS       DASRPQ010001618         1205 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4585281, whole genome shotgun sequence.
ACCESSION   DASRPQ010001618 DASRPQ010000000
VERSION     DASRPQ010001618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4585281"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            150..>1205
                     /locus_tag="VFD73_18425"
     CDS             150..>1205
                     /locus_tag="VFD73_18425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase"
                     /protein_id="HZI75959.1"
                     /translation="MSDHPIVPAGLFFVLSAIVLSGCTGARAARVGDAGDAAQRVYVG
                     PGKYDEFYAFMSGGFDGQVGVYGLPSGRLLKHVPVFSQNAENGWGYSEQTKPMLTTSY
                     GFVPWDDAHHPQLSQTKGVPDGRWLFINGNNTPRIARLDLTRFETEEILEIPNSAGNH
                     SSPFVTENTEYVVAGTRFSVPAPQRDVSIDDYKQAFSGVLTYVKVDSASGHMAIAFQI
                     RLPAFDYDLSHSGKGPSHGWSFFTSYNSEEGNSKLEVSASQNDKDYIAAVNWQQAEKC
                     VSQNKASTEPARYAHNLIGNDGVARTQWGSSVRMLTPKSCPGMVYYLPTPKSPHGVDV
                     DPTGEFIVAGGKLATVIP"
BASE COUNT          242 a          404 c          354 g          205 t
ORIGIN      
        1 cgtgaggtca gacgagcccc gcgccggccg ctggaagatg tcctgcgctg atctcggcat
       61 gaacggatct tcatgagcag ttcacggtca gcagcagcac ccgctcccaa cttaggagga
      121 gatacctagc gccccaacca ggagaaccca tgtcggatca cccaattgtt cccgccggcc
      181 tcttcttcgt actgagcgca atcgtcctct ccggctgcac cggagcccgc gcggcccggg
      241 tcggcgatgc cggtgatgcc gcccagcggg tgtacgttgg ccctggcaag tacgatgagt
      301 tctacgcgtt catgtccgga gggttcgatg ggcaagtggg cgtgtacgga cttccgtctg
      361 ggcggctgct caagcatgtc ccggtcttct cccagaacgc cgagaacggc tgggggtaca
      421 gcgagcagac caagccgatg ctcacgacga gctacggttt tgtaccctgg gacgatgccc
      481 accaccccca gctgtcccaa accaagggcg tccccgacgg gcgctggctc ttcatcaacg
      541 gtaacaacac gccccgcatt gcccggctcg atctgacacg gttcgagacg gaagagatcc
      601 tcgagattcc caacagcgca ggcaatcact cttcaccctt cgtcaccgag aacaccgagt
      661 acgtcgtcgc gggaacccgg ttcagtgtgc cggcccccca gcgcgacgta tcgatcgatg
      721 actacaagca ggcgttcagc ggggtgctca cctatgtcaa ggtcgatagc gccagcggcc
      781 acatggcgat cgccttccag atccggctgc ccgcgttcga ctacgatctc tcccattccg
      841 gcaagggtcc ctcccacggc tggtcgttct tcaccagcta caacagcgag gaagggaact
      901 cgaagctgga ggtgagcgcc tcccagaacg acaaggacta catcgccgcg gtcaactggc
      961 agcaggccga gaagtgcgtg tcgcagaaca aggcctcgac cgagccggcg cgctatgccc
     1021 acaacctgat cggcaatgat ggagtagccc ggacccaatg gggcagcagc gtcaggatgc
     1081 tgactcccaa gtcctgcccc gggatggtct actacctgcc tactcccaaa tcacctcacg
     1141 gagtcgacgt tgaccccacc ggcgagttca tcgtggccgg cggaaagctg gcaacggtga
     1201 tcccg
//
LOCUS       DASRPQ010001619         1895 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2733991, whole genome shotgun sequence.
ACCESSION   DASRPQ010001619 DASRPQ010000000
VERSION     DASRPQ010001619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1895
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2733991"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..616
                     /gene="moaC"
                     /locus_tag="VFD73_18430"
     CDS             137..616
                     /gene="moaC"
                     /locus_tag="VFD73_18430"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001612668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HZI75960.1"
                     /translation="MKLSHVDEQGRARMVDVSSKPESQRTAVAEGTIRMSAEAFELVA
                     DHAIAKGDVLAVAEVAGTMAAKRTGELIPLCHPLGLDLVEVEARLDRKLPGVRVKATT
                     RATGRTGVEMEALTAVSIACLTVYDMVKSVDREMSINEVRLLSKSGGTRGDWRRPGS"
     gene            650..1351
                     /locus_tag="VFD73_18435"
     CDS             650..1351
                     /locus_tag="VFD73_18435"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HZI75961.1"
                     /translation="MAKPIDYGEPKPLTAERILLRGGVFLAAAVGIGALGGWNKAVRA
                     ASDHASNLPDLVLAARQMGNLTQQLDSAKGEAVVIKLQLERANTILQNSTRYQIPADL
                     AAAIYDISLSEGIDPSLGYQLVKIESQFNRKAKSKMQAYGYTQLQLATARFYQPGIKE
                     KDLYDRDTSLRLGFRFLNELLARFHYDVHLALLAYNRGPAKVDEILAQGGNPANGYSD
                     AVLKGYRPLTSMPSR"
     gene            complement(1348..>1895)
                     /locus_tag="VFD73_18440"
     CDS             complement(1348..>1895)
                     /locus_tag="VFD73_18440"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HZI75962.1"
                     /translation="HFVARGETLSGIAVRYHVSQSMLMAANPKLNSRRIRIGQRVVVP
                     TGGVPSTRVARRMAEPVVAAGTSTAAFHRVRRGETISEIADEYGVTQRELMAWNSLDR
                     WGRIRAGQRLRVVSPDAPRPAAAQPPADSDNGRTHVVRRGDTLKGLAKRYGVSIQALR
                     EANGLDERATLRVGLALKIPG"
BASE COUNT          335 a          588 c          631 g          341 t
ORIGIN      
        1 cactgctccg ctatcgcggt ccggaccagt tgctccaggc aatcgaacgg gtggcggacg
       61 cgcgggaggc cgcctggggc aacgtgaatc ctcagttatt gctggctgtt ctgggcgagg
      121 atttggcgga ggtgctgtga agctgagcca tgtcgacgag cagggccggg cccgtatggt
      181 ggacgtgagc tccaagcccg agtcccagcg gaccgcggtg gccgaaggca cgatccgcat
      241 gtcggccgaa gcgttcgagc tggttgcgga ccatgcgatc gccaagggcg acgtgctggc
      301 ggtggcggaa gtggcaggta ccatggcggc caagcgcacc ggagagctga ttcctctctg
      361 ccacccgctt ggattggatc tggtcgaggt tgaggcccgg ttggatcgga agcttcctgg
      421 agtgcgggtc aaggcaacga cgagggccac cggccggacc ggagtagaga tggaggcgct
      481 gacggcggta tcgattgcct gtctgactgt gtacgatatg gtcaagtcgg tggaccggga
      541 gatgagcatc aacgaggtgc gattgctgag caagagcggg ggaacgcgcg gagattggcg
      601 ccggccagga tcctgaggac ggccttctca taagagaaag gggctgcacg tggcgaaacc
      661 catcgattac ggcgaaccca agccgctgac cgcggagcgg attctgctcc ggggaggagt
      721 cttcttggcc gccgctgtcg gaattggtgc gctgggcggc tggaataagg ccgtccgggc
      781 cgcgagcgac cacgcgtcga acctgcccga ccttgtactc gccgcgcgtc agatgggcaa
      841 cctcacgcag cagttggatt ccgccaaggg cgaggctgtg gtcatcaaac tgcagctgga
      901 gcgggccaac acaatcctgc agaactccac ccgctatcag atcccggcgg atctggcggc
      961 ggcgatttac gacatctcac tcagcgaagg aatcgatccc tcgctcggct atcagctggt
     1021 caaaattgag agccagttca accggaaggc caagagcaag atgcaggcgt acgggtatac
     1081 ccagcttcag ctggcgacgg cccgttttta tcagcctggc atcaaggaga aggacctcta
     1141 cgaccgcgat accagtctca ggctcgggtt tcgcttcctc aacgagctcc tggcgcggtt
     1201 ccactacgac gtgcacctgg cgctgctggc ctacaatcgg ggaccggcca aggtggatga
     1261 gattctggcc cagggcggga atcctgctaa cggctactcc gacgccgtgc tgaagggcta
     1321 tcgtccgctg acgtccatgc cgtcgcgcta gcccgggatc ttgagcgcca gccccaccct
     1381 cagggtggcg cgctcatcca agccgttcgc ctctctgagg gcctggatcg aaacgccata
     1441 ccgtttcgcc aggcccttca gcgtgtctcc ccgcctcacc acgtgggtcc ggccattgtc
     1501 gctgtcggcc ggtggctgtg ccgctgcagg tcggggtgcg tcgggcgaca cgaccctgag
     1561 ccgctgtccc gctcgtatcc gcccccaccg atccagtgag ttccaggcca tcagctcgcg
     1621 ctgagtgact ccgtactcgt cagcgatctc cgaaatggtt tcaccccgcc gaacccggtg
     1681 gaacgccgcc gtgctggtgc cggctgcgac aaccggctcc gccattcgcc gcgcgaccct
     1741 ggtggacggt accccgcccg tgggcacaac gacccgttgt ccgattcgaa tccggcggct
     1801 gttgagcttg ggattggcgg ccatcagcat cgattggctc acgtgatacc tgacggcaat
     1861 gccgctcagc gtttcgcctc gggctacgaa gtgct
//
LOCUS       DASRPQ010001620         1311 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1124774, whole genome shotgun sequence.
ACCESSION   DASRPQ010001620 DASRPQ010000000
VERSION     DASRPQ010001620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1311
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1124774"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(116..994)
                     /locus_tag="VFD73_18445"
     CDS             complement(116..994)
                     /locus_tag="VFD73_18445"
                     /inference="COORDINATES: protein motif:HMM:NF021506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2232 domain-containing protein"
                     /protein_id="HZI75963.1"
                     /translation="MVLLLGYLLLAPPVLLFGPLAGLLLLARPRSFREWLWLAGTIGG
                     SALWLDQAGGLAGQFTRAIAVLLTGTFLALTIWRPSGTFSRVLTTTAITGVALVLWMW
                     HLGLAWSEVQRAIERGLWSYNQDLLIRMGQNGDLPPDAFLAQMSAMVHTIGSLYPAIL
                     ALASLAGLMLAWSWHHRIARHPLGPRPERFAAFQFSDQLVWGWVLGLALCLLPLPKFA
                     SAIGANLLLVWAVLYAVRGLAVFFAGSRRVPGVVMATLTLIAMFLLPFVLGGLTLLGL
                     ADTWVDFRRRLPASAT"
     gene            complement(1054..1275)
                     /gene="rpsR"
                     /locus_tag="VFD73_18450"
     CDS             complement(1054..1275)
                     /gene="rpsR"
                     /locus_tag="VFD73_18450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HZI75964.1"
                     /translation="MRRPQKTCAICESGVRVVDFKDERTLSRFLTERGKILPSRLSGT
                     CARHQRQLSTAIKRARQLALLPYIKGFTG"
BASE COUNT          285 a          425 c          404 g          197 t
ORIGIN      
        1 cccctgcgga agcaggtaat tgcgggcata gccgggcttg actttgacca tttctccggc
       61 ccgtcccaag gtcttgatgt cctcgcgcag tatcacttcg atcataactc tcccctcagg
      121 tggccgacgc cgggagacgg cgccggaaat ctacccaggt gtcggcgagt cccagcaggg
      181 tgagcccgcc caacacaaac ggcaacaaaa acatggcaat gagagtcagg gtggccatca
      241 ccacgcccgg gactcggcgc gacccggcga agaacaccgc caggccgcga acggcgtaga
      301 gaacggccca gaccagcaac aggttcgctc ctatcgcgct cgcaaatttg ggtaaaggaa
      361 gcaggcagag ggcgaggccc aggacccagc cccaaaccag ctgatcgctg aactggaacg
      421 cagcgaatct ttccggccgc ggtccaagcg ggtggcgtgc gatccgatga tgccagctcc
      481 aggccagcat cagccccgcc agtgaggcca gggcaaggat tgccgggtac aggctcccaa
      541 tggtgtgcac cattgccgac atctgcgcca agaaggcatc gggaggcaaa tcaccattct
      601 gacccatccg gatcagaaga tcctggttgt agctccacaa cccgcgttca atggcgcgct
      661 ggacctcgct ccaggccagg cccaggtgcc acatccaaag aaccaacgcg acgccagtga
      721 tggctgtggt ggtcagaacc cgagagaagg ttccagacgg gcgccagatc gtcagcgcga
      781 gaaaggttcc ggtcagcagt acggcgattg cgcgggtgaa ctgtccggcc agcccgccgg
      841 cctggtccag ccagagcgcc gagcctccga tcgtcccggc caaccaaagc cattcgcgaa
      901 acgatcgggg gcgagccaag agcagtagcc ctgccaatgg cccgaacagc aggactggag
      961 gcgccaggag caggtagcca agcaggagaa ccaccgccgt ccagcggtga ggactctccg
     1021 gccgtccgcc tgtaacggaa agggagggcc gattcagccg gtgaaccctt tgatgtaggg
     1081 cagcagcgcc agctgccggg cacgcttgat ggcagtgctc aattgtcgct gatgccgggc
     1141 acacgttccc gacagccggc tgggcagaat cttgcctcgc tccgtgagga aacgggacaa
     1201 ggtccgctcg tctttgaaat ccactacccg cacaccggac tcacagatgg cgcaggtctt
     1261 ctggggccgt ctcattcgtc gtcctcctca tccgatttgc cggcggtaac c
//
LOCUS       DASRPQ010001621         2416 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3359382, whole genome shotgun sequence.
ACCESSION   DASRPQ010001621 DASRPQ010000000
VERSION     DASRPQ010001621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2416
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3359382"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..890
                     /gene="pqqC"
                     /locus_tag="VFD73_18455"
     CDS             141..890
                     /gene="pqqC"
                     /locus_tag="VFD73_18455"
                     /EC_number="1.3.3.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR02111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline-quinone synthase PqqC"
                     /protein_id="HZI75965.1"
                     /translation="MTTALSPSALAAPPRPPFPELRQPLSSDALADAMRSFSTSYYAK
                     HPFHQLMHEGRLTARQLQGWVANRLAYQRAIPRKDAAIISNCPEPEVRRAWMQRIVDH
                     DGLAPGTGGIELWVRLGEALGVPREEMEDERHVLPGVRMAAESYVTFCKTKPWIEAVA
                     ASLTELFAPDLMRKRIAAFPQHYPWIQGDALEYFRSRLVQAPRDSQQGLRLVQERCTT
                     IESQRRAFEALAFKLEMLWVMIDTIHHAYSE"
     gene            902..1150
                     /gene="pqqD"
                     /locus_tag="VFD73_18460"
     CDS             902..1150
                     /gene="pqqD"
                     /locus_tag="VFD73_18460"
                     /inference="COORDINATES: protein motif:HMM:TIGR03859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis peptide
                     chaperone PqqD"
                     /protein_id="HZI75966.1"
                     /translation="MPRLWKLARLDYDPVRQKHVLLYPEGAVLLNDTGAAILELCNGS
                     RTLGEIVAILGDRYHTDVSADVTEYLEQMAARELVRDG"
     gene            1140..2264
                     /gene="pqqE"
                     /locus_tag="VFD73_18465"
     CDS             1140..2264
                     /gene="pqqE"
                     /locus_tag="VFD73_18465"
                     /inference="COORDINATES: protein motif:HMM:TIGR02109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018149 - peptide cross-linking [Evidence
                     IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqE"
                     /protein_id="HZI75967.1"
                     /translation="MTAEIPTTLLAELTHRCPLHCPYCSNPLELVRANSELTTSEWKR
                     VFTEARALGVLQLGLSGGEPLLRKDLEELAEHARREGLYSTLVTSGLGLTRGRAERLK
                     EIGLEHIQISIQDSDPEVAERIAGVRSVKHKQAAAALVRELGFAFTVNVVLHRANLDR
                     IGEIIDLAADLGADRVELANTQYYGWGLQNRSALQPTREQVERSREVAERAVQRYRGR
                     MQITYVLPDYYEPYPKACYGGWGKLYLVIAPNGSVLPCHGATQITTLTFDNAREHSLE
                     WIWNESTAFQMFRGDSWMKEPCRSCSRKTVDFGGCRCQAFALTGDAANTDPVCTLTPL
                     RRIVDEALLEPSLAAPEYRYRYPTEEPAKVNGVSALVPSQ"
BASE COUNT          455 a          768 c          736 g          457 t
ORIGIN      
        1 ctcgctgcag cgaccgcaaa ccgtctatac ccacatcaac aacaccaatc ccattttgct
       61 ggaggattct tccgagagag ccgaagtcga gcaacgcggc ctcaaggtgg gattcgatgg
      121 catgagcttt agcatttaac atgaccaccg ccctgagtcc ctccgcgctt gcggcaccgc
      181 ctcgaccgcc gtttcccgag ctccgtcagc cgctttcttc tgatgccttg gcggatgcaa
      241 tgcgatcgtt cagtacgtcc tattacgcaa agcatccctt tcaccagctg atgcacgagg
      301 gcaggctgac ggcacgacaa ctccaagggt gggtagcgaa tcggctggcc taccagcgcg
      361 ccattccccg gaaagacgcg gccatcatct ccaactgtcc cgagccggag gtccgtcgcg
      421 cctggatgca acggatcgtg gaccacgatg gcctggcgcc gggcaccggt gggatcgagc
      481 tctgggttcg gctcggcgag gcgctcggcg tcccccgaga ggagatggag gacgagcgac
      541 atgtgcttcc tggggttcgc atggcggcag aatcgtatgt caccttctgt aagaccaagc
      601 cctggatcga ggctgtggca gcgtcgctga cggagctctt tgcccctgac ctgatgcgga
      661 aacggatcgc cgcgttcccg cagcactatc cctggattca gggcgatgcc ctggaatact
      721 tccgtagccg cctggttcag gcgcccagag atagccagca gggcctgcga ttggtccagg
      781 agcgatgcac cacgatcgaa agccagcgcc gggcctttga ggcgctcgcc ttcaagttgg
      841 agatgttgtg ggtgatgatc gacacaattc accacgccta ttccgaatga cgaatgacgc
      901 agtgcctcga ctctggaagc tggcccggct ggattacgat ccggtacgtc agaagcatgt
      961 gctcctgtat cccgaaggcg ccgtgctgtt gaacgacacc ggagccgcca ttctcgagtt
     1021 gtgcaacggc agtcgcacac tgggcgagat cgtcgccatt ctgggcgacc gctaccacac
     1081 cgacgtcagc gctgacgtca ccgagtacct ggagcagatg gcagcgcggg agctggtccg
     1141 tgacggctga gattccgacg acattgctgg cggagctgac ccaccgctgc ccgctccact
     1201 gtccctattg ctccaatccg ctcgagctgg ttcgagcgaa cagtgagctc accaccagtg
     1261 agtggaagcg cgtctttacc gaagcccgcg ccctcggcgt tcttcagctg gggctgtcgg
     1321 gtggtgaacc actgctccgc aaggatctgg aggagctcgc agagcacgct cgcagggaag
     1381 gtctctattc caccctggtc acttcgggtc tgggattgac gcggggacga gcggaacgcc
     1441 tgaaggagat cggcctcgag cacatccaga tctccatcca ggactccgac cctgaagtcg
     1501 cggagcgcat tgccggcgtc cgctcggtga agcacaagca ggccgccgcc gccctggtaa
     1561 gggaactggg attcgccttc accgtaaatg tggttttgca tcgggccaac ctcgaccgaa
     1621 tcggagagat catcgacctg gccgctgatc tgggtgccga tcgcgtcgag ctggccaaca
     1681 cccagtatta cggctgggga ctgcagaacc ggtccgcgct ccaacccacc cgggaacagg
     1741 tggagcggtc ccgggaagtt gccgaacgcg ccgtccagcg ctatcggggt cggatgcaga
     1801 tcacctacgt cctgcccgac tactacgagc cctatcccaa ggcgtgctac ggcggctggg
     1861 gcaagctcta tctggtgatc gcccccaacg gcagcgtact tccctgccac ggtgccacgc
     1921 agatcactac gctcaccttc gacaatgcgc gggagcattc gctcgagtgg atctggaatg
     1981 agtccacagc gtttcagatg ttccgggggg acagctggat gaaggagccc tgccggagct
     2041 gctcccgaaa gacggtggac ttcggcggct gtcgctgtca ggcattcgcg ctcaccggtg
     2101 acgccgccaa caccgatccg gtatgcaccc tgacaccact gcggcgcatt gtcgatgagg
     2161 ctttgctgga gccctccctg gccgcccccg aataccgtta ccgctatccg acggaagagc
     2221 ctgcgaaggt caatggggtg tcggcgctgg tgccgagcca atgaaagcga tcgttcgcta
     2281 ctctgcctcc atgtaggggt accgatagtc tttcggcggg ttcagagttt ctttgatact
     2341 ccgaggcgag acccaccgct ccagattgag aatcgaaccc gccttgtcgt tcgtgccgct
     2401 ggcccggctt cctccg
//
LOCUS       DASRPQ010001622         1272 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1463652, whole genome shotgun sequence.
ACCESSION   DASRPQ010001622 DASRPQ010000000
VERSION     DASRPQ010001622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1272
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1463652"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(80..991)
                     /locus_tag="VFD73_18470"
     CDS             complement(80..991)
                     /locus_tag="VFD73_18470"
                     /inference="COORDINATES: protein motif:HMM:NF006615.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HZI75968.1"
                     /translation="MVSALTTADMIEALEETGRYRVLDLYRQTDGYHDLSGLPTVCRA
                     LYIDTETTGLEHDADIIELAAVQVEYDPATGRLGRILGSHSWLEQPVSGKPVPVEVTV
                     LTGLTNDMLTGQRIDEPAVLDLLSNSHLVISHNAAFDRPKLETRLPAFARKPWACTVT
                     DLDWQAEGIATARLDYVAFRLGFMFGGAHRGEVDCLAGVEVLSRTLPRSGTRAMSALL
                     TRARQATLRVWALGSPYGAKDDLKRRGYRWNDGAYPGSPKAWYRDIRETDEATELEWL
                     KVNAHCSGLAVRLTARDRHSGRAMAVP"
BASE COUNT          240 a          421 c          386 g          225 t
ORIGIN      
        1 cggccgtgtc gcctgagggc cggcggcgcg tgcccctcca aggacgacct ccaccaaccg
       61 accgcggcca ttcacccgct cacggcactg ccatcgcccg tccgctatgc cgatcgcgtg
      121 ctgtcagcct caccgctagg ccggagcagt gggcgttcac cttcaaccat tcgagctcgg
      181 ttgcttcgtc cgtctcacgg atgtcccggt accaggcctt tggactgccc ggataggccc
      241 cgtcgttcca gcgatagcca cgccgcttca ggtcatcctt ggcgccgtac ggacttccaa
      301 gtgcccagac tctcagggtc gcctggcggg cgcgcgtcaa cagcgccgac atggcccgtg
      361 tgcccgagcg cggcagtgtc cggctcagca cctcgacgcc cgccaggcag tcaacctcac
      421 cgcggtgcgc cccgccgaac atgaacccca gtcgaaaggc gacataatcc agcctggcgg
      481 tggcgatccc ttccgcctgc cagtccagat cggtaacggt gcaggcccag ggcttacggg
      541 cgaacgccgg cagcctcgtt tccagcttcg gccggtcgaa ggccgcgttg tggctgatca
      601 ccagatgtga gttggacagc aggtccagga ccgctggctc gtcgatccgc tgcccggtga
      661 gcatgtcgtt ggtaaggccg gtcagcactg tcacctcgac cggcaccggc ttgccgctca
      721 ccggctgttc gagccacgaa tgggagccga ggatccggcc aagccggccg gtcgctggat
      781 catactcgac ctgcaccgcc gccagttcga tgatgtccgc atcgtgctcc aggccggtcg
      841 tctcggtgtc gatgtagagc gcacggcaga cggtcggcag accggacaga tcgtgatagc
      901 cgtcggtctg gcggtagaga tccagcacac ggtaacggcc cgtctcctcc agtgcctcga
      961 tcatgtcggc agttgtcaaa gcagaaacca cgatcacacc aataaccttg cagaaattcc
     1021 gttgttgaga tcccatcatg ataggagtcc gggatttaat aacctgctga ccaagcggtg
     1081 accactaacg gtgcaaaatg gtcagaacgg acacgacttg gtcagaaagc cgaacagcag
     1141 cgcctggttg gggaggtcaa gagaggggta tcggcggcgg ctctgtctgg cgcgggcgaa
     1201 cactatgaac gccagagaag aatcatcatc ttgcgttcag tgcctaaacc gcgtccagtt
     1261 tgaaacccgt ag
//
LOCUS       DASRPQ010001623         1425 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1784225, whole genome shotgun sequence.
ACCESSION   DASRPQ010001623 DASRPQ010000000
VERSION     DASRPQ010001623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1425
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1784225"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..586
                     /locus_tag="VFD73_18475"
     CDS             <1..586
                     /locus_tag="VFD73_18475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75969.1"
                     /translation="QIRRDGSMKRVVALVMGLMILLGGATACGSSSSSTPAAAPTAQS
                     ASAASPQTGSPSAASCASVGTRKIPKTRLLADLALTYGAFHRYLYRPYQAGTFRKGAH
                     GRIKAIIKAGLATAAIIKLLSNAEKNAAADPTLCKFVPSMGTIKASLSSLAAKIRGGT
                     ATSSDANSTNSLFEQLKSGTGFTSAGNALLPGLG"
     gene            975..1316
                     /locus_tag="VFD73_18480"
     CDS             975..1316
                     /locus_tag="VFD73_18480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75970.1"
                     /translation="MLKTARAASLNLLPEATPALGRGAQVGAILQMNETQDREFRCRR
                     RAFIRACHPDRGGDTDLFTAGLRAFDTGREPEAGQLPKVVIVKRRPWLVRLVVVAGRR
                     VRHGRKPSRVR"
BASE COUNT          254 a          464 c          458 g          249 t
ORIGIN      
        1 gcagattcgg agggatggat cgatgaaacg tgtagtagcc ctggtcatgg gtctgatgat
       61 cctgctgggc ggggccacgg cgtgcggctc gtcgagcagt tcgacaccgg ccgcggcacc
      121 taccgctcag tcggcgtccg ccgccagccc ccagaccggt tctccgtcgg cagcctcgtg
      181 cgcgagcgtc gggacccgga aaattcccaa gacccggctg ctggcggatc tagccctgac
      241 ctacggggcc ttccaccgct acctgtacag gccctaccag gccgggacgt tccgcaaggg
      301 cgctcacgga cgtatcaagg caatcatcaa ggccggactg gctaccgcag cgatcatcaa
      361 gctgctcagc aacgctgaga agaacgccgc cgcggacccg accttgtgca agttcgtccc
      421 cagcatgggc accatcaaag ccagcctgag cagcctggcg gccaagatca ggggcggtac
      481 cgccacgtca agcgacgcca acagtaccaa cagcctgttc gagcagctga agagcggcac
      541 tgggttcacg tcggcgggca atgccttgct gccagggttg ggctgagccg acggctacca
      601 tgagcgtccg tcacgtgctc gacgcaacga tcgcaaggcc atgtgaccat tactgtgacc
      661 aagacggcgt gagacagcct agacggggca ggacggcgcc cggtttgctc ataacccaaa
      721 ggtcgcgggt tcaaatcccc ccgataccag gaaaacgccc cggaaacatc gtttccgggg
      781 ccgttttctg ctacttgtga tcagactctg gtcacaagta gcagcgccgt gaggcaagct
      841 gcgcgtcgga tgagacatat ccgtatggga gtggagcagc gtggcgtcag gcgcaatctc
      901 cactctcgat ctctggcgcc ccggcctgga cgcgcaaccg caccgacgcc cgccgtccag
      961 tctcggccga ggctttgctg aagacggccc gggcagctag cctgaacctg ctgccggaag
     1021 ctactcccgc tctcggccga ggggcgcaag tgggcgccat tctgcagatg aacgaaaccc
     1081 aggatcgcga attccggtgc cgccgccggg ctttcatccg ggcgtgtcat cctgaccgag
     1141 gcggggatac ggacctcttt accgcgggtc tgcgggcctt cgataccgga cgggagccgg
     1201 aggccgggca gttgcccaaa gtggtaattg tcaagcgtcg cccgtggctg gtccggctgg
     1261 ttgtcgtggc aggtcggcgg gttcgccatg gtcgcaagcc ttcccgagtc cgttagtccg
     1321 ctcctgcggg gccctccgcg gcggttttcg gctagcgttc gtcgtcgccc aggatgtcgt
     1381 ctacggtgac gttgactttc acgttctgca gtcccacctg gtcgc
//
LOCUS       DASRPQ010001624         1257 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3359653, whole genome shotgun sequence.
ACCESSION   DASRPQ010001624 DASRPQ010000000
VERSION     DASRPQ010001624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3359653"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..514
                     /locus_tag="VFD73_18485"
     CDS             <1..514
                     /locus_tag="VFD73_18485"
                     /inference="COORDINATES: protein motif:HMM:NF018484.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chlorite dismutase family protein"
                     /protein_id="HZI75971.1"
                     /translation="SVTELTEYMPSEEDNRKTLEAEKLEPGSEAYEKRWAEMTKRREE
                     YEHYRLYPELPDWEVMCFYPMNKRRAGNDNWYVLDLPTRKRLMGGHARVGRKYANRIS
                     QLITGSTGVDDWEWGVTLMAHQVDAIKEIVYEMRFDEVSARYGEFGEFYVNLRLTPPA
                     LWTHLRLEQA"
     gene            737..>1257
                     /locus_tag="VFD73_18490"
     CDS             737..>1257
                     /locus_tag="VFD73_18490"
                     /inference="COORDINATES: protein motif:HMM:TIGR01409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HZI75972.1"
                     /translation="MRTNSSPTDRPSALTRRSFLRRGTVAAAAAVALPHVLTAQKSEK
                     QLVIGDGEHRYEVQHNWAQLPDRYTWQTTHNVAVDREGLLYVIHEGRENQKEHPSIFV
                     FDGAGKFVRAFGSQFQGGGHGLEVITEGKEQFLYVTGYQQLKNFAKLSLTGEVVWEKR
                     APMDSKLYPANEDT"
BASE COUNT          254 a          364 c          427 g          212 t
ORIGIN      
        1 gagcgtgacc gagctgaccg agtatatgcc gtcggaggag gacaaccgga agacgcttga
       61 agccgagaag ctcgagccag gctccgaggc gtatgagaaa cgctgggcgg agatgaccaa
      121 gcgccgggag gaatacgagc attaccgcct gtatccggag ctgcccgatt gggaggtgat
      181 gtgtttctac ccgatgaaca agcgccgcgc cgggaacgac aactggtacg tgctcgacct
      241 gccgacccgc aagcggctga tgggcggaca cgcccgggtc ggacgcaagt acgccaaccg
      301 catctcccag ctgatcaccg gttctactgg agtggacgac tgggaatggg gcgtgaccct
      361 gatggcgcac caggtggatg ccatcaagga gatcgtttac gagatgcgct tcgatgaagt
      421 cagcgcccgc tacggcgagt tcggcgagtt ttatgtcaat ctccggttga ccccgcccgc
      481 gctgtggacg catctgcgcc tggagcaggc gtaaggcgcg gatccgggat ggggctggcg
      541 aacggctgcc aggagaggag aagaggctga ttttgtggcc ggggcctcac cccggccttt
      601 ttccgcgcac tggcgctggc gtgggcactg gagcgggaca cggaggaaca cctggcctgc
      661 acctgcaggc ccgggggtga tcaacgggat tgcctaatcc ggcgggctgc ctacagttcg
      721 gcaacaccca attcctatgc gcacaaattc ttccccaacg gatcgcccgt ccgccctgac
      781 ccgtcgttcg ttccttcgcc ggggcacggt ggccgcggcc gcggcggtgg ccctgccgca
      841 cgtcttgacg gctcagaagt ccgagaagca attggtgatc ggcgacggcg agcaccggta
      901 tgaagtgcaa cacaactggg cgcagctgcc ggaccgttac acctggcaaa cgacgcacaa
      961 cgtcgcggtc gatcgcgagg ggttgctcta tgtcatccac gaagggcgcg agaaccagaa
     1021 ggagcatccg tcgatcttcg tgttcgatgg cgccgggaag ttcgtgcgcg cgtttggcag
     1081 ccagtttcaa ggcggcggcc acggcctgga agtgatcacc gaaggcaagg agcagttcct
     1141 gtatgtgacc ggctaccagc aattgaagaa ctttgccaag ctgagcctga ctggcgaggt
     1201 cgtgtgggaa aagcgcgcgc cgatggattc aaagctgtat cccgcgaacg aggatac
//
LOCUS       DASRPQ010001625         1403 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1784512, whole genome shotgun sequence.
ACCESSION   DASRPQ010001625 DASRPQ010000000
VERSION     DASRPQ010001625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1403
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1784512"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..774
                     /locus_tag="VFD73_18495"
     CDS             <1..774
                     /locus_tag="VFD73_18495"
                     /inference="COORDINATES: protein motif:HMM:NF019592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HZI75973.1"
                     /translation="LAAGGAAFPFTLPNGFAGFNTPATFIRFNRALRARVAVYLNDWT
                     SALAALSQSFLDPAAPFSTGVYIDHGTGPGDFANPLAQNPTVGENFAHPSLETDAQLQ
                     PGGQPDQRFLDKVIQRPERSVGSGAGQLSSHLGWIRYATPSTPIPIIRNEELILLRAE
                     ANIGLGNLALATDDINLVRTTAGRLAPIAVPATPDAALDALLYEKRYSLLYEGGHRWI
                     DMRHYGRLASLPIDRPANTPPDVVFSTLPIPTAEVLPRQ"
     gene            807..1190
                     /locus_tag="VFD73_18500"
     CDS             807..1190
                     /locus_tag="VFD73_18500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75974.1"
                     /translation="MNAVRGVSLVLVAAGLFGCGGDGSKYAGTWKRDLYGEGEVQMKL
                     ASNGGVELMLPSPRWPDSVDMKGRGRFKGDTLVFKADTAASACQTGDARYVVSRDQDQ
                     LHIAGLGKDSCGGRRAALVGTWQKS"
     gene            complement(1224..>1403)
                     /locus_tag="VFD73_18505"
     CDS             complement(1224..>1403)
                     /locus_tag="VFD73_18505"
                     /inference="COORDINATES: protein motif:HMM:NF016274.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004668 - protein-arginine deiminase
                     activity [Evidence IEA];
                     GO_process: GO:0009446 - putrescine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HZI75975.1"
                     /translation="EARTTLQRLFPEREVIGIDSADLVWGLGAFHCVTQQWPLAAGQR
                     DTRTAAHKEEGSGEL"
BASE COUNT          263 a          423 c          461 g          256 t
ORIGIN      
        1 cttgcggccg gcggtgccgc gtttccgttc acgctgccca atggctttgc cggcttcaac
       61 actccggcca ctttcatccg attcaatcgt gcattacggg ccagggtcgc ggtctatctg
      121 aatgactgga ccagcgccct cgcggccttg agtcaatcgt tcctggaccc ggcggcacct
      181 ttctcgaccg gagtgtatat cgatcacgga accggccccg gtgacttcgc caatccgctg
      241 gcgcagaatc cgacggtcgg cgagaacttt gcccatcctt cgctggagac ggacgcgcag
      301 ctgcagccgg ggggccaacc agatcagcgg ttcctggaca aggtgattca acggccggaa
      361 cggtctgtcg gcagtggtgc gggacagctc agctcccatc tcggctggat tcgttacgcg
      421 acgccgagca ccccgattcc aattatccgc aacgaggagc tgattctgtt gcgggcggaa
      481 gcgaacatcg ggctgggaaa tctggcgctc gccacggacg acattaacct ggtacggacc
      541 accgccgggc gtcttgcccc gatcgccgtg ccggccacgc ccgatgccgc actcgacgcc
      601 ttgctgtacg agaagcggta ttcgttactg tacgagggcg ggcatcgctg gatcgacatg
      661 cgtcactatg ggcggctggc gagtctaccc atcgatcgcc cggccaatac cccgccggac
      721 gtagtcttct ccacgctgcc gattccgacc gcggaggtat tgccgaggca gtagcgtggc
      781 acactgacga ccaaggagga gaggaaatga acgctgtacg aggcgtcagc ctggttttgg
      841 tggcagccgg gttgttcggg tgtggtggag acggaagcaa atatgccggc acctggaaga
      901 gggatctcta tggggaagga gaggtccaga tgaagctggc atccaacggc ggtgtcgagc
      961 tcatgttgcc ctcaccccgg tggcctgatt cagtggacat gaagggccgc ggccgcttca
     1021 aaggcgatac tctggttttc aaggcggaca cagcggcaag tgcctgccaa accggcgatg
     1081 cccgatacgt cgtcagtcgg gatcaggacc aactgcacat tgccggttta ggaaaggaca
     1141 gctgcggcgg aaggcgggcg gcgctggtgg gcacctggca gaagtcgtga ggaagcgcgg
     1201 cagccaggca gcaagaacaa gggctacaat tctccggaac cttcctcttt gtgggccgcc
     1261 gtcctggtgt cccgctggcc cgctgcaagc ggccactgct gggtgacgca atgaaaggcg
     1321 cctaggcccc agaccagatc ggcggagtcg atcccgatca cctcgcgctc ggggaagagg
     1381 cgctggagtg tggttcgtgc ctc
//
LOCUS       DASRPQ010001626         1054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3954758, whole genome shotgun sequence.
ACCESSION   DASRPQ010001626 DASRPQ010000000
VERSION     DASRPQ010001626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3954758"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..522)
                     /locus_tag="VFD73_18510"
     CDS             complement(<1..522)
                     /locus_tag="VFD73_18510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019235960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HZI75976.1"
                     /translation="MAGGFDQVVGHPKFMIMDMFPYPSGSGLHVGHPLGYIATDVYAR
                     FLRMMGHNVLHPFGYDAFGLPAEQYAIDTGRHPKVTTKRNIATMKRQLRRLGLGHDLR
                     REFATTDPAYYKWTQWIFLQIFNSWFDGEAGRARPVAELVAEFESGRRAPVSEANPED
                     RPWAELDDAGRRKI"
BASE COUNT          221 a          363 c          288 g          182 t
ORIGIN      
        1 aatcttccgc cggccggcat cgtccagctc cgcccagggc cgatcctcag ggttggcctc
       61 gctgacggga gcccggcggc ccgactcgaa ctcggccacc agttccgcga ccggccgcgc
      121 acgcccggcc tcaccatcga accagctgtt gaagatctgc aagaagatcc actgcgtcca
      181 cttgtagtag gcgggatcag tggtcgcgaa ctcacgccgc aggtcatgac caagccccag
      241 ccgccgcaac tggcgcttca tcgtcgcgat gttgcgcttg gtggtgacct taggatgccg
      301 ccccgtgtcg atggcgtact gctccgccgg cagcccaaac gcgtcatagc caaacgggtg
      361 gagcacgtta tgccccatca tgcgcagaaa acgggcgtaa acatcggtcg ctatatagcc
      421 aagtggatga cccacatgca gacccgaacc gctcgggtaa gggaacatgt ccatgatcat
      481 gaacttcggg tggccgacga cctgatcaaa acctcccgcc ataggcccaa tcgggttcgg
      541 ggtgcagaaa gtaccggcag cctcccagta gtcctgccat cgcaactcga tctcattggc
      601 cagacgagcg tcataacgga accgaagacg atcaccctcg ctggccccag cagcgctgcc
      661 cgtatccgct ccggccataa cccctccatg ccgcctggaa tagtcagctt cccgttccat
      721 ggtcccgcta cggtcgctgc cgttccggcc aaaaccctca caggaagggc cgccacgctg
      781 atcaaacatt agagcagccc caggccagcg tcggcatcga cagcacgacc tcctacgcgg
      841 caggcaacgg tgccgattcc catccgactg ccggtgggcc agggcatccc tctgacctca
      901 ctgggatgta ccagccggag ctgtcgggca tctagcggat acctggccta actggtcggg
      961 gggaattcca ggcgtcatct aatcaaccaa aattacgaaa aggccttctg acctggagcc
     1021 cctttacgga atcgaaccgt agaccttctc ctta
//
LOCUS       DASRPQ010001627         1015 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1125218, whole genome shotgun sequence.
ACCESSION   DASRPQ010001627 DASRPQ010000000
VERSION     DASRPQ010001627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1125218"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            431..>1015
                     /locus_tag="VFD73_18515"
     CDS             431..>1015
                     /locus_tag="VFD73_18515"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI75977.1"
                     /translation="MKRHVYRERDYAFAQLVLTLRTAIGLTQAGLAERLGASRRAVAE
                     WEGGLSYPKTERLKELITLGMRASAFGAGREEEEIRALWKAAHQKVLLDDAWLDDLLA
                     PLSPVPLSPRAGTHEAAEPAAFPRVNLVEALDVSHFAGREVEVAELSQWIVHERCRLV
                     TLLGMGGIGKSMLASLLGSRLTPQFEAVLWRSLRD"
BASE COUNT          201 a          304 c          329 g          181 t
ORIGIN      
        1 aattatggta ttcaggagat tagaggttga ttgctctaaa tcgaggaaag atccgcaatc
       61 aacaaactac cggtagagat gccctaccgc aaagagggca ctctggccac ctgacccagg
      121 cttcgcagca aagctgtgcc actctcatct atggggagac gccgtgatca ctcaagaaaa
      181 cagcttcgcg cgttcgcagc acatgtggta tgctagaggc agagagaaca ggggggctgg
      241 actcatgcag cagtgttcca gccccaggca ggcgttcacc cacgcagcgg gcacacccga
      301 cactcatcag tatagcggat gggtcctctg gaagtcagcg tccagcaggt gacgtgtgac
      361 tacacacctc acttcacatt ccgtcacagt gtgtcgctgc gccgggtcac gcgagatcag
      421 gagatcgctc gtgaagagac atgtgtaccg ggagcgagac tatgccttcg cccagttggt
      481 gctgacgctg cgcaccgcca tcggcctgac gcaagcgggc ctggccgagc ggcttggcgc
      541 ctcccggcga gcggtggcgg agtgggaggg cggcctgagc taccccaaga cagaacgcct
      601 caaagagctg attaccctgg ggatgcgagc ctccgccttt ggcgccgggc gcgaggagga
      661 ggagatccgc gcgctgtgga aggcggccca ccagaaggtg ctgctggatg acgcctggtt
      721 ggatgacctg ctcgctcctc tttcgcctgt cccgctttcc ccacgggccg ggacgcacga
      781 agcagcggaa ccggccgcct tcccacgcgt caacctggtg gaagccctcg acgtgagcca
      841 cttcgcgggt cgcgaggtgg aagtggccga actctcgcag tggattgtgc acgagcgctg
      901 ccgcctggtg acgctgcttg ggatgggtgg catcggcaaa agtatgctgg cctccttgct
      961 agggagccgc ctgactcctc agttcgaggc ggtactctgg cgctccctga gggac
//
LOCUS       DASRPQ010001628         1873 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1125256, whole genome shotgun sequence.
ACCESSION   DASRPQ010001628 DASRPQ010000000
VERSION     DASRPQ010001628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1873
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1125256"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..409)
                     /locus_tag="VFD73_18520"
     CDS             complement(<1..409)
                     /locus_tag="VFD73_18520"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HZI75978.1"
                     /translation="MTDKLTDAEMDAWQALLHAHHQITRTLDAELREEHDLTLGEYDV
                     LLRLVRAPDRTLRMTEIAQRILISPSGLTRVVDGLEEKGWVQRRRDSDDARVVRARLT
                     DAGREKVRKAARTHLRGIREHFTGRLSNAQLRAV"
     gene            575..1258
                     /locus_tag="VFD73_18525"
     CDS             575..1258
                     /locus_tag="VFD73_18525"
                     /inference="COORDINATES: protein motif:HMM:NF015549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HZI75979.1"
                     /translation="MVSSTSSTGSAYRDGARAVAPLALAIGVLGVVFGYVARSAGLSA
                     TGAVVMSATTFAGSPQFAAVSILSAGGTMTAAVSAAAVLSLRFAAMSLVVAPAMGGCL
                     LTRLLTAQLVVDEIWAVAYVGEGLFSRERLIGAGLVLYLAHVGSTGLGALAGGLIRNP
                     AAWGVDVMPPALFVVLIWPCLHGSGLVAAATAALTTLALIPLVPFGVPILAAAVASVT
                     LGLAVRSCQ"
     gene            1255..1578
                     /locus_tag="VFD73_18530"
     CDS             1255..1578
                     /locus_tag="VFD73_18530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HZI75980.1"
                     /translation="MSRAWLLVALVGLVTATIKAAGPMLFALLGPTTRPRLLLQQVVP
                     ILMPAILAALIVTQVFSVRERLTFDSRAVGLLVAMLGAYRHAPPGVVLIAAAVATALV
                     RLLAR"
     gene            1575..>1873
                     /locus_tag="VFD73_18535"
     CDS             1575..>1873
                     /locus_tag="VFD73_18535"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HZI75981.1"
                     /translation="MTPTRVLAIPGSFRRNSYNRRLLLAAVELAPVGMSISVAEDLAS
                     LPIFSEDLEQSTPGGPEPVHRLREQVELADGLIISTPEYNQSLPGGLKNVIDWLSR"
BASE COUNT          268 a          599 c          628 g          378 t
ORIGIN      
        1 ccaccgcacg cagctgcgcg ttggacagcc ggccggtaaa gtgctcccgg attccgcgta
       61 agtgggtccg ggcagcctta cggaccttct cccggccggc gtcggtcaac cgggcacgga
      121 ccacccgcgc atcgtcggaa tcgcgccgcc gctggaccca acccttttcc tccagcccat
      181 ccaccacccg ggtcaggcca ctaggcgaga tcaggatccg ctgcgcgatc tccgtcatcc
      241 gaagggtcct gtccggcgcg cggaccagcc ggagaagcac gtcgtactcg cccagggtga
      301 gatcgtgctc ctcgcgcaat tcggcatcca gcgtccgggt gatctggtga tgcgcgtgaa
      361 ggagggcctg ccaggcgtcc atctccgcgt cggtgagctt gtcggtcatg ctgggggatc
      421 gagctccagg tgcttgcacg tgcaaacagt aaggcgtggc ctgcagcgaa gcaattgagc
      481 ctcagttacc ggcttgcgcg gccattcgcc cggatatatg cttcgcaatg caattattgt
      541 agacgcaagt atacctgggc aaccgcgggt gaccatggtc agcagcacat ccagcaccgg
      601 ctcggcgtac cgggatggag cccgggctgt ggcgccactg gcgctcgcga tcggcgtact
      661 tggcgtggtg tttgggtatg tcgcacgatc ggcggggctg tccgctacgg gcgcggtggt
      721 catgtccgca acgacctttg ccggatcccc ccagtttgcc gcggtctcga ttctgagcgc
      781 gggcggtacg atgaccgccg ccgtgtccgc cgcggccgtg ctcagtttgc ggtttgccgc
      841 aatgagcctg gttgtcgcgc cggcgatggg ggggtgtctg ctgactcggc tgctgacggc
      901 gcagctggtg gttgacgaga tctgggccgt ggcctacgtc ggcgagggtc tcttcagtcg
      961 agagcgcctg atcggcgcag gcctggtgct ttacctggca catgtgggct ctaccgggct
     1021 tggagcgctg gcgggcgggc ttatccgtaa tccggcggca tggggcgtcg atgtcatgcc
     1081 cccggcgctg ttcgtggtgc tgatttggcc gtgcctccat ggcagcggac tcgtcgcagc
     1141 ggcgacagcg gcgctcacga cgctcgccct gattccgctg gtaccgttcg gggtacccat
     1201 tctggcggca gccgttgcct cggtcactct cggcctggct gtccggagct gccaatgagc
     1261 cgggcttggc tgctggtagc tctcgttggc ctggtgacgg ctacgatcaa agccgcgggc
     1321 ccgatgctct tcgcgctgct gggacccacc acacggcctc ggctgctgct gcagcaggtc
     1381 gttcccatac tcatgccggc aatcctggcg gcgcttatcg tgacccaagt gttcagtgtg
     1441 cgcgagagac tgacattcga ctcccgtgcc gtcggactcc tggtggcgat gctgggcgcg
     1501 tatcggcacg ctccgccggg agtggttctg atcgcggcgg cggtcgcaac ggcgctggtg
     1561 cgccttctcg ctcgatgaca ccgacccgcg tccttgccat tccagggagt tttcggcgga
     1621 actcatacaa ccgccggttg ctattagccg ctgtggagtt ggccccggtc gggatgtcga
     1681 tcagcgtagc ggaagacctg gcctcccttc ctatttttag tgaggacctg gaacagtcca
     1741 cgccgggtgg tccggagccg gtccatcgcc tgcgtgaaca agtcgaattg gccgatggcc
     1801 tcattatctc gacgcccgag tacaaccagt cgcttcccgg cggactcaag aacgtgatcg
     1861 actggctgtc tcg
//
LOCUS       DASRPQ010001629         1056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3954884, whole genome shotgun sequence.
ACCESSION   DASRPQ010001629 DASRPQ010000000
VERSION     DASRPQ010001629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3954884"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..790)
                     /locus_tag="VFD73_18540"
     CDS             complement(<1..790)
                     /locus_tag="VFD73_18540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75982.1"
                     /translation="MATQEQPQSQRYQDTPMEPSAKDVATGPELNGTKTWAICCSGGG
                     IRSASYCLGALQGLEEAGFLGKARLILGVSGGSYIAASRALVAHGLEQTAAGPGGDPA
                     RLPPYAPGSPEEQHLRDNSRYLAPDAKTVLAGVLSLLFGVAVTLVLVLTPLFVVAHVW
                     GWVLRAGGALTYTVAPHSRTPQWTAALTGTAWWIWPVVAAAVTAVIFLWWWVTLIPGV
                     RGQEHSNVAVKALGWAAFVTLSLALAMFAVPAVIAWLSGSHAGAL"
BASE COUNT          201 a          362 c          330 g          163 t
ORIGIN      
        1 tgagggcacc ggcgtgcgat ccggatagcc aggcaatgac cgccgggacg gcgaacatgg
       61 ccaacgcgag cgacagggtg acgaaagcgg cccaccctag cgctttgacc gcgacattac
      121 tgtgctcctg accgcggacc ccgggtatca gggtgaccca ccaccacagg aatatgaccg
      181 ccgtcaccgc ggcggctacg accggccaga tccaccaggc ggtcccggtc agcgcagccg
      241 tccactgcgg cgtgcgggaa tgaggcgcca cagtataggt cagcgctcct ccggcacgca
      301 gcacccagcc ccagacatgc gccaccacga atagcggggt gaggaccaga accaaggtga
      361 ccgccacgcc aaacaacagc gaaagcaccc cggccagcac ggtcttggcg tcgggtgcga
      421 ggtatcgcga attgtcacgc aggtgttgct cttccgggct gccaggggcg tacgggggca
      481 gtcgcgccgg gtccccgccc ggcccggccg cggtctgctc gagaccgtgc gccaccagcg
      541 cccgcgatgc cgcgatatag ctgccgccgg acacgcccag gatcagcctg gccttgccca
      601 ggaacccggc ctcctcgagg ccctgcaagg cgcccaggca gtacgaagcc gaacggatcc
      661 cgccacccga acagcagatc gcccacgtct ttgtcccgtt gagctccggg cctgtggcca
      721 catccttggc agaaggctcc atcggcgtat cttgatagcg ctgagactgt ggttgctcct
      781 gagttgccat ttctgtccct ttcaaggtcg ggtgtcctgg tggacgacgt cacttacctt
      841 gagcgccgag atgaggatgg tcggcaggca tccccgcact aagacttcac cctgatagag
      901 ggaccgaatg cctcggctga tacactgcgc cgcagatgag cgcgtcgaac ggatgcgcgt
      961 gagccgttag ccaccccgtc gcggcatgac aggcattaat actcagagat gcttttcgag
     1021 ctcgatctca tcccgcgcgg aatcccgtag gcgctc
//
LOCUS       DASRPQ010001630         1240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1784633, whole genome shotgun sequence.
ACCESSION   DASRPQ010001630 DASRPQ010000000
VERSION     DASRPQ010001630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1784633"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..377)
                     /locus_tag="VFD73_18545"
     CDS             complement(147..377)
                     /locus_tag="VFD73_18545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75983.1"
                     /translation="MGEKGNLLDMGEEIFANLAEQGPKFWLDFKQYQLARAQNAQAPV
                     AAEQQGAAVTEHDAAAQDGPARFSWPSPRATE"
     gene            complement(935..>1240)
                     /locus_tag="VFD73_18550"
     CDS             complement(935..>1240)
                     /locus_tag="VFD73_18550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75984.1"
                     /translation="GPGRCRYRGREDPASKPRRTPMPNGSYSPPGPRSQTGAHLRRTT
                     PAAGPGRVRGALQRTAPHHSRQLRPPRPDHPVADLRQKRIKRRPVLGGLINEYKRAA"
BASE COUNT          182 a          397 c          409 g          252 t
ORIGIN      
        1 aattccagct ccagcccaag cagatcacct ggacctggcg ccacctcgct ggggacgcgc
       61 aggcgcatcg cctcgctcag acggcgatcg ctgcggccga gcatggctag caccgggcgg
      121 ccttcgccgg ccaccggccc ggccttctac tcggtggccc ggggggacgg ccagctgaac
      181 ctagccggcc catcttgcgc ggccgcatcg tgttccgtaa ccgcggcccc ctgctgctcc
      241 gccgctacgg gcgcctgagc attctgggcc cgggctagct ggtactgctt gaagtccagc
      301 cagaattttg gtccctgctc tgctaggttc gcgaagatct cctcgcccat atcgagcaga
      361 ttgcctttct cacccatctc tcctactctc cagcctcact cattccgaga tcgtgcccga
      421 atctgatcca ggagcggatc tccttacttt tacagtgcgc aaagtccgcg gcgctgatac
      481 tcaatgcata gattcccgtg gatattcacg cagcggtccg gcctaaccgc gacaccaggg
      541 atttaggggg ctggtttgca gatccgtgac ctgtggcttt tgcgggagtt ggtggggttc
      601 gctgcgcggt tgcagcatgg gtggggcccc tggtaattga taaggggttc ggatgtctga
      661 tacgtccctg ctgttcgccg ggccggttct gtaaactgcc gaggtcccga gccaggttcg
      721 atctggtcgg cttcgaccgg cgcgggacga atcggaatcc tgcgctgttc ggcaatccga
      781 ggcagtgggg cccgtacttc acgccgttcg cgttcctggg cacgcccgtc gaagagcaga
      841 cccgaatgac cgccgacctg tacctggctc caattgcata cggcgcgggg cctggagggt
      901 tccagaactc ggctaccaga cttgacctgg gcttctacgc ggctcgcttg tattcgttga
      961 tgagcccgcc gaggacgggt cggcgcttga tccgcttctg gcggaggtcg gcgacggggt
     1021 ggtccggccg gggcgggcgg agctggcggc tgtgatgggg cgccgtccgt tgtagtgcgc
     1081 ctcgaactcg gccaggacca gccgcaggtg tcgttcgccg aagatgagca ccggtctgtg
     1141 acctcggtcc gggcggtgag tacgaaccgt tcggcatagg cgttcgccgg ggcttcgagg
     1201 cgggatcttc gcggcctcga taccggcacc ggccaggtcc
//
LOCUS       DASRPQ010001631         1237 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_501269, whole genome shotgun sequence.
ACCESSION   DASRPQ010001631 DASRPQ010000000
VERSION     DASRPQ010001631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1237
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_501269"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..337)
                     /locus_tag="VFD73_18555"
     CDS             complement(<1..337)
                     /locus_tag="VFD73_18555"
                     /inference="COORDINATES: protein motif:HMM:NF024313.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI75985.1"
                     /translation="MDELLPAAPARVQRPTWRRSPLTVAGLALITILALIALLAPLLA
                     PSDPLKQVLSTRLDPPSAEHWLGTDQLGRDVLSRMIYGARISLLIGTVVVVLSASIGT
                     FVGLVAGYFG"
     gene            complement(330..>1237)
                     /locus_tag="VFD73_18560"
     CDS             complement(330..>1237)
                     /locus_tag="VFD73_18560"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI75986.1"
                     /translation="AIVALGDHATDAQIETFREKYGLNKPVPEQYWLYVTGLLRGDLG
                     ISLRTRRPVAEDLRNFFPATFELSLTALVFSILIGIPAGVLSATARNRLPDHIVRLVS
                     LIGGSIPIFWLGLILIGFFYGRLGWLPGGARIDKFIPPPAEVTGLFTVDSLLAGDYKA
                     FWSSIQHLFLPALALGYFSTAIIARMMRSSMLEVLNQQYVLAARAKGLGSRLVVWRHA
                     ARNALIPTVTTIGVTFGSLLSGAVLTETIFSWPGLGRYATSSAINLDFPAVMGVTLLA
                     ALVYTLANLVVDLGYQWLDPRIRNG"
BASE COUNT          256 a          378 c          417 g          186 t
ORIGIN      
        1 cgccgaaata gcctgccaca agccccacga acgtcccgat gctggcagag agcactacaa
       61 ccaccgtccc gatcaggagc gagatgcgcg caccgtagat catccggctg aggacatcgc
      121 ggccgagctg atcggtgccc agccagtgct ccgcggaggg tggatccagc cgggtggaga
      181 gcacctgctt gaggggatcg gacggcgcga ggagcggcgc caacagggcg atcagggcga
      241 ggatggtgat cagggccagt ccggctactg ttagcggact gcgccgccag gttgggcgct
      301 ggacgcgggc gggtgcggcg gggagcaact catccattgc ggatccgcgg gtcgagccac
      361 tgataaccca ggtccaccac caggttcgcg agcgtgtaga cgagcgctgc aagcagggtc
      421 actcccatca cggccgggaa gtcgaggttg atcgccgagc ttgtggcata gcgtcccagg
      481 cccggccagc tgaaaatggt ctcggtcagc acagcgcctg agagcaggct tccaaaggtc
      541 accccgatgg tcgtcactgt ggggatcagc gcgttgcgag ctgcatggcg ccaaaccacc
      601 agccttgagc ccaggccttt ggcacgcgcg gccagcacat attgctggtt gagcacctcg
      661 agcatgctcg agcgcatcat gcgtgcgatg atcgccgtgg agaagtaccc cagcgccagc
      721 gccggcagga acaaatgctg gatactgctc cagaaggctt tgtagtcccc ggccagcagg
      781 ctgtccacgg tgaacaggcc ggtgacctcc gccgggggtg ggatgaattt atcgatgcgg
      841 gcgccgccgg gcagccagcc cagtcgcccg tagaagaaac cgatcaggat caggcccagc
      901 cagaaaatgg ggatcgaccc gccgatcagc gacacgaggc gcacgatatg atcgggcaga
      961 cggttgcgcg ccgtcgccga gagcacaccc gcagggatgc cgatcagaat ggagaagacc
     1021 agtgcggtca gcgatagctc aaaggttgca ggaaagaaat tacgcagatc ctccgccacc
     1081 ggtcgccggg tgcgaaggct gatccccagg tcgcctcgaa gtaagccggt gacatagagc
     1141 cagtattgct cgggcacggg cttgttcagc ccatatttct cgcggaaggt ctcgatctgc
     1201 gcatcggtgg cgtggtcccc cagcgccaca attgccg
//
LOCUS       DASRPQ010001632         1224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_816638, whole genome shotgun sequence.
ACCESSION   DASRPQ010001632 DASRPQ010000000
VERSION     DASRPQ010001632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_816638"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..555
                     /locus_tag="VFD73_18565"
     CDS             <1..555
                     /locus_tag="VFD73_18565"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HZI75987.1"
                     /translation="PPLKVWVGVGGSPESVVRAARYRFPLTLAIIGGDPRRFAPYVEL
                     YYRSLAQLGLERLPVGVHSPGHIAETDAQAREQLWPHYQIMRNRIGAERGWPRTSRAE
                     FDSEVAAGSLYVGSPETVAKKIASTARALGASRFDLKYSAGTLPHQIMMRSIELYGRE
                     VIPLVRELTGEPASPAVEAAAPNA"
     gene            627..1091
                     /locus_tag="VFD73_18570"
     CDS             627..1091
                     /locus_tag="VFD73_18570"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZI75988.1"
                     /translation="MRPAYLVPAVLLLLSSPLVAQSATNTASALKRIEQRYAKATVER
                     DTLVLRRLESPDAVIQYPDGTIGTGASDVNAVVSGMAQIEAYDQDSVRVHLVNPTVAV
                     VVYRASVKGNMRATAGTQAQDISGNYRFMDVWRKRGGQWQLVAQQITGIAAK"
BASE COUNT          245 a          378 c          389 g          212 t
ORIGIN      
        1 cctccgctta aggtctgggt cggggttggc ggcagtccgg agtcggtggt ccgagccgcc
       61 cgttatcgct ttcctctgac gctcgcgatc atcggcggcg acccgcggcg gttcgctccc
      121 tacgtcgagc tgtattaccg ctcgcttgct cagctggggc tcgagcggct gccggtcgga
      181 gtccattccc ccggacatat cgcagagacc gatgctcagg cgcgagagca gctctggccc
      241 cactaccaga tcatgcgcaa ccggatcgga gcggaacgtg ggtggccgcg aaccagccgg
      301 gccgagttcg acagtgaggt tgcggcgggc tcgctgtatg tgggatcacc ggagaccgtt
      361 gcaaagaaga ttgcgagcac ggcgcgtgcg ctcggcgcat cacgcttcga tctcaaatac
      421 agtgccggca cgctgcccca ccaaatcatg atgcggagca tcgagctgta tgggcgcgag
      481 gtgattcccc tggtgcgcga attaaccggt gagccggcct cgccggctgt cgaggcagct
      541 gcgcctaacg cgtaatcgac gacccgcgta ccgggggata aggtaggcgc ttcaaccaca
      601 ccaaaaccct cactaggggg gaatccatgc gtcctgccta tctggtgccc gcggtgcttc
      661 tattactctc ctcacccctc gttgctcaaa gtgcgaccaa tacggcttcc gccctcaagc
      721 gcatcgaaca gagatacgcg aaggccacag tggagcggga cacgctggtc ttgaggcgtc
      781 tggagtctcc cgatgctgtg attcagtatc ccgacggcac catcggcacc ggcgcctcag
      841 acgtcaacgc tgtggtctcc ggcatggcac agatcgaggc gtacgaccag gattccgtgc
      901 gagtgcatct ggtgaaccca accgtagccg tagtggtcta tcgtgcgtcg gttaagggca
      961 acatgcgggc gaccgccggc acccaggctc aggacatcag cgggaactac cgttttatgg
     1021 atgtatggcg gaaacggggt ggccagtggc aactcgtcgc ccagcaaatc accggaatcg
     1081 cggcaaagta gagacacgga cctgcgaacg taaatgaaca aagcccgcat tgcagggcgg
     1141 gactcgagcc gaaggccgag ccaaaaaaaa tgcccaccgt ttaaggtggg catagcaggg
     1201 gcgggactcg aacccgcgac cccg
//
LOCUS       DASRPQ010001633         1010 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1785134, whole genome shotgun sequence.
ACCESSION   DASRPQ010001633 DASRPQ010000000
VERSION     DASRPQ010001633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1785134"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..497
                     /locus_tag="VFD73_18575"
     CDS             <1..497
                     /locus_tag="VFD73_18575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75989.1"
                     /translation="SAGVGLEPQAGYFLDTIQTIRATITPDTLLAAARMSAQDARDKS
                     TDAAGDDEARSKLARLRLELAAYCYYCATLMQFFNADLTEKRLKAAEDGSGDRSINQL
                     AQARQAFAISPQVTCSMTSAFRRAHGMDVPIFEGKPGQAAALTTPAGAEKAAAISVPA
                     AKSD"
BASE COUNT          212 a          325 c          302 g          171 t
ORIGIN      
        1 caagtgctgg agtcgggcta gaaccacagg caggatactt tctcgacacg attcagacga
       61 tccgggccac catcacacca gacacgctct tggcagccgc tcgcatgtcg gcccaggatg
      121 cgcgagacaa gtccaccgac gccgccgggg acgacgaggc tcggtcgaaa ctcgccagac
      181 tgcgccttga actggccgcc tactgctatt actgcgccac cctgatgcag ttcttcaatg
      241 ccgacctcac cgagaaacgc ctgaaggcgg ccgaggatgg atcgggtgat aggagtatca
      301 accagcttgc gcaagcgcga caggcattcg ctattagtcc gcaggtgacc tgctccatga
      361 cttcggcgtt ccggcgtgcg cacggcatgg acgtgccgat ttttgaaggt aagcctggtc
      421 aggcggcggc tctaacaaca ccagcaggag cagaaaaggc agctgccatc agcgtgcccg
      481 cggccaagtc cgactgactg tagatctgct gacattcgga tggacggacc agagcgacac
      541 caccatctcc tagtggcaaa accaccgcct ccgcttccag ttcagctagc caaaggcacg
      601 attcgctgca tggtgtcaac gcgctaacgc tgtgctaaca acagctgtgg acacgtacgg
      661 tcgatcctgg acgccgagat gcccgagcag gtcatctgac ctgatcaggc ggactgtggt
      721 ggactcgcgt ggacccggac attctcctga aaagcggaag gccgactgtt cagctgccgt
      781 ctcggccgca agcgatgcgg atgcactgcc gaattacgcc gtactggatc aagcggcgcc
      841 gaccgggcgt cagcgccgct gctcagcctc gggaggcccg cgtggcgcac gccgggccac
      901 agccgcgagc ctccccagat gagtacgact cattcatcag gcgaacctgg agcgagattc
      961 cggaagtctt tctccgatcc gtcgcagctc ggctacccag ggctccgggc
//
LOCUS       DASRPQ010001634         1949 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1785259, whole genome shotgun sequence.
ACCESSION   DASRPQ010001634 DASRPQ010000000
VERSION     DASRPQ010001634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1949
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1785259"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            5..1681
                     /gene="ilvD"
                     /locus_tag="VFD73_18580"
     CDS             5..1681
                     /gene="ilvD"
                     /locus_tag="VFD73_18580"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF002068.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HZI75990.1"
                     /translation="MPDNFRSNVITQGLQRAPNRAMLRAVGFGDADFDKPIVGIANAH
                     STITPCNAGLAELAERAEAAIRSAGAMPQVFGTITVSDGISMGTEGMKYSLVSREVIA
                     DSIETACGAQSMDGLVAIGGCDKNMPGAMIAIARMNIPAIFVYGGTIKPGHYAGRDLT
                     VVSAFEAVGQRSAGTIDDRELLEVERRACPGKGSCGGMFTANTMSSVFEAMGMSLPYS
                     STMAAEDAEKAESAAESGRVLVQAIRRRLTPRQILTRKAFENGIAVVMATGGSTNAVL
                     HLLAIARAAGVPLDLDDFEAIRARVPVLCDLKPSGRFVATDLHRAGGIPQVMKVLLTH
                     GLLHGDSITITGRTVGDTLAALPSDPGSHQEVIRSWDRPLYPQGHLAILKGNLATEGA
                     VAKITGVKSPRISGPARVYESEESCLEAILEKRIQPGDVLVIRYEGPRGGPGMREMLA
                     PTSAIIGAGLGDSVGLITDGRFSGGTYGMVVGHVAPEAAAGGTIALVEEGDTITIDAE
                     RRLVQLEVSEEELSRRRSRWKAPKPRYTSGVLHKYAKLVSSASIGAVTDL"
BASE COUNT          368 a          582 c          662 g          337 t
ORIGIN      
        1 ctgaatgcca gacaatttcc gcagcaatgt catcacccag gggctgcagc gcgcgccgaa
       61 ccgggccatg ctgcgcgccg tcggattcgg agatgccgat ttcgacaagc cgatcgtcgg
      121 gatcgcgaac gcccacagca ctatcacccc ctgcaatgcc ggccttgctg agttagccga
      181 gcgggccgaa gcagcaatcc gctctgccgg tgccatgccg caggtgttcg ggaccatcac
      241 cgtgagcgac ggcatttcga tgggaacgga ggggatgaag tactcgctgg tgtcacggga
      301 ggtcatcgca gactccatcg agaccgcctg tggagcgcag agcatggatg gcctcgtcgc
      361 catcggcgga tgcgacaaga acatgcctgg agcgatgatc gccattgccc ggatgaatat
      421 ccccgcaatc ttcgtctatg gcggcaccat caaaccgggg cactacgctg ggcgcgatct
      481 cacggtggtg agtgccttcg aggccgtggg ccaacgcagc gcggggacca tcgacgaccg
      541 tgaactgctc gaggtggagc gcagagcctg tccgggaaag ggctcctgtg gtggaatgtt
      601 taccgcgaac accatgtcgt cggtgttcga ggccatgggg atgagccttc cctactcttc
      661 caccatggcg gcggaggacg ccgagaaggc ggagagcgca gccgagtcgg gacgagtgct
      721 ggtgcaggcg atccggcggc gcctgacccc tagacagatc ctcacccgga aggcattcga
      781 aaacgggatc gcggttgtga tggcgaccgg tggatccacc aacgcggtgc tccatctgct
      841 cgccattgct cgagctgcgg gggtgccgct ggacctggac gacttcgagg ccatacgggc
      901 acgcgtgccc gtgctgtgcg atctcaaacc gtcgggccgg ttcgtcgcca ccgatctgca
      961 ccgggcaggc ggaattccgc aggtgatgaa ggtcctcctc acccacggtc tgctgcacgg
     1021 agactcgatc accatcaccg gacggaccgt aggtgatacg cttgccgcac tgcccagcga
     1081 tccgggttct caccaggagg tgatccgaag ctgggaccgg ccgctctacc ctcagggaca
     1141 tctcgcgatt ctcaaaggaa atctggccac tgaaggcgca gtcgcgaaaa tcaccggagt
     1201 gaagagcccg cggatcagcg ggccggcccg ggtgtatgag tcagaggaga gctgtctgga
     1261 agccatcctc gagaagagga ttcagccggg cgacgtgctg gtgatccgct atgaaggacc
     1321 ccggggcggg ccggggatgc gcgagatgct ggcgcccacc tctgctatca tcggtgcggg
     1381 actgggtgac tcggttgggc tcatcaccga cgggcggttc tccggaggga cctatggtat
     1441 ggtggtcggc cacgttgctc cggaagcagc ggccggtgga acgatcgctc tggtggaaga
     1501 aggcgatacc atcaccatcg atgcggagcg acgattggtg cagctcgagg tcagcgagga
     1561 ggagctgtcc cgccgacgtt cccgctggaa ggcaccgaag cctcgctaca ccagcggggt
     1621 actgcacaag tacgccaaac tggtgtccag cgcgagcatt ggagccgtga ccgatctctg
     1681 aaaacggtca gggcgatcgt ggggcgcggg aacggctgtg gtacagccta ctaatcgcgt
     1741 tgtgcctggc gctctttgcg gctctcacga cggcagtcct gggacatcac acggacgcgt
     1801 gggacacaag ctggatgatc actctagggc gtgagcggcg tccctggctc accggcgtaa
     1861 tggaggcctt gagcgttgcg ggctcgggac tcctcgagtt accgctcgcc atcgtgctga
     1921 tcattggtct actgctgcgg cagcggaat
//
LOCUS       DASRPQ010001635         1375 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2735660, whole genome shotgun sequence.
ACCESSION   DASRPQ010001635 DASRPQ010000000
VERSION     DASRPQ010001635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1375
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2735660"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            48..1163
                     /locus_tag="VFD73_18585"
     CDS             48..1163
                     /locus_tag="VFD73_18585"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI75991.1"
                     /translation="MLLIGAILAPGRRTVASLLRICGLMRERHFVNYHRVLNRAAWSP
                     LLASRLLLRLLIETFAPNGPVVLGLDDTIERRRGKRIAAKGIYRDPVRSSHGHFVKAS
                     GLRWLSMMLLVPIPWAERIWALPFLTALAPSERHNLEHGRRHKKLTEWGRQVVLQVRR
                     WLPGRDLVLVADSSFAALDFLAALVCHDVVCITRLRLDAALYDPAPPRLPGTVGRPRT
                     KGKRLPNLSTVLIDAGTLWQHVLVPGWYGGGERAVDLCSGTAVWRHAGLPVVPIRWVL
                     VRDPLGRFDPQALLCTDPNQDPHQVLRWFVQRWQLETTFQETRAHLGVETQRQWSDLA
                     IARTTPCLLGLFSLVTLLAAQLSPTARGAVMSAAWPN"
     gene            1148..1375
                     /locus_tag="VFD73_18590"
                     /pseudo
     CDS             1148..1375
                     /locus_tag="VFD73_18590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_058167704.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
BASE COUNT          206 a          474 c          438 g          257 t
ORIGIN      
        1 tgcacttcgc accgctgttt tatcatcgca gctggcgcca tgccgaggtg ctgctgattg
       61 gcgccattct tgcgccgggg aggcgcaccg tggccagcct gctgcggatt tgcgggctga
      121 tgcgggagcg gcactttgtg aactaccacc gggtgctgaa ccgggcggcc tggagcccgc
      181 ttctggcctc ccggctgctg ttgcggctgc tgatcgagac gttcgcgccg aacggtccgg
      241 tggtgctcgg cctcgacgac acgattgagc gtcgccgtgg caagcgcatt gccgccaaag
      301 gcatctatcg cgacccggtc cgttccagcc acgggcattt cgtcaaggcg tccggcctgc
      361 gctggctcag catgatgctg ctggtgccga tcccctgggc ggagcgcatc tgggctcttc
      421 cgtttctgac cgcgctggcc ccctccgaac gacacaacct cgagcacggc aggcggcaca
      481 aaaagctgac cgagtggggc aggcaggtgg tcctgcaagt acgcaggtgg ctgccaggac
      541 gcgacctggt gctggttgcc gacagcagct tcgccgccct ggatttcctg gccgctcttg
      601 tctgccacga tgtcgtttgc atcacccgcc tgcgccttga tgccgccctc tatgatccgg
      661 caccgccccg tctgcccgga acagtcggac gtcctcggac caagggcaag cggctgccaa
      721 acttgtccac ggtgctgatc gacgcgggca ccctctggca gcacgtcctg gtgccgggct
      781 ggtatggcgg gggcgagcgc gccgttgatc tctgctccgg caccgcggtc tggcgccatg
      841 ctggactgcc cgtcgtgccg atccgctggg tgttggtgcg tgacccgctg ggccggttcg
      901 acccgcaagc cttgctctgc accgatccca accaggaccc gcaccaggtc ctgcgctggt
      961 tcgttcaacg ttggcaactg gagaccacat tccaggagac ccgggcgcat ctgggcgtcg
     1021 agacccagcg ccaatggtcc gacctggcca tcgcacgcac caccccttgc ctgctcgggc
     1081 tattctccct cgtgaccctg ctcgccgcac agctcagccc gacggcacgc ggggccgtta
     1141 tgagtgcagc ctggccgaac tgaatgcggc aatcggcgag ctgctgcgcc agctcaacga
     1201 cgagcggcca atccgccgcc tcggcatgac ccgacgatca ctgctcgagg aactcgatcg
     1261 gccgcacctc aagccgttgc caagtgagcc gtatgcttat gccgaatggc gcctgcggca
     1321 ggttggcatc gattaccacg tcgaggtcga agcgcatttc tatagcgtgc cgtac
//
LOCUS       DASRPQ010001636         1697 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2379939, whole genome shotgun sequence.
ACCESSION   DASRPQ010001636 DASRPQ010000000
VERSION     DASRPQ010001636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1697)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1697)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1697
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2379939"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1697)
                     /locus_tag="VFD73_18595"
     CDS             complement(<1..>1697)
                     /locus_tag="VFD73_18595"
                     /inference="COORDINATES: protein motif:HMM:NF012361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HZI75992.1"
                     /translation="HPPEVGAGRFGEWLENNVDWALSRDRYWGTPLPVWVCDQDSSHI
                     EVIGSYETLAERWGKPLPTDFDPHKPFIDRYVWPCRCGGTMRRTPEVIDTWFDSGAMP
                     YAQWHYPFEHKAEFERHFPADFICEGVDQTRGWFYSLLAIATTAFDSLAYRHVIVNEL
                     VLDAEGQKMSKSRGNVADPWQMIEQFGADTIRLYLLASSQVWLPKRFDPRTIPEVAGK
                     FLNALKNSYQFFAAYAGEWSPADAPDPAQRSLADQWLLSRVDGVVEKVADAWSGYDVT
                     TGVRAIMDLMIDDVSQWYVRVNRSRFWAPDSVADPAALATLYDALTTVSQLLAPAAPF
                     VSDWLHRALTGTSVHLTRFPVSRGLRKPELETAMDAVRRLASLARAAREERNIRVRQP
                     LRRMQVALPANAKVRALNELLELLRQEVNVKQIEIVASDTELVRLRAKPNFRSLGKRY
                     GKRTPAVAAAAATLTSGQLHGLERGSPATLELEGEAVTYLPEDVAVEREVASDWLVQS
                     EGPFVVALDPQVDEPLRREGLAREVVNRVQRIRKDAGYAYVDRIELWIDGDAPLLEAA
                     "
BASE COUNT          306 a          572 c          520 g          299 t
ORIGIN      
        1 gctgcttcga gcaacggtgc gtcgccgtcg atccacagct cgatacggtc gacataggcg
       61 tagccggcat ctttgcggat gcgctgcacc cggttgacga cctcccgggc caggccctca
      121 cgccgcagcg gctcgtcgac ctggggatcc aacgctacca cgaacgggcc ttcgctttgg
      181 accagccagt cgctggcgac ttcgcgctcg acagcgacat cctccggcag ataggtgacc
      241 gcctccccct ccagctccag cgttgccgga ctgccccgct ccagcccatg gagctggccc
      301 gaggtgagcg tggccgccgc ggccgccaca gccggcgtcc gtttgccgta acgtttgccg
      361 aggctccgga agttgggctt ggctcgaagc cggaccagct cagtatcgga ggccacgatc
      421 tcgatctgct tcacgtttac ctcctgacgc agcagctcga gcagctcatt caacgcgcga
      481 actttcgcgt tggcgggcaa cgccacttgc atccggcgca acggctggcg aacccggatg
      541 tttcgctctt cccgggcggc acgggccagt gaggccagcc gcctcaccgc atccatcgca
      601 gtctccagct ccggcttgcg gagtccgcgc gataccggaa accgggtgag gtgcacagag
      661 gttcccgtca gggcccggtg cagccaatcg ctgacgaatg gagcggccgg agccagtagc
      721 tggcttaccg tggtcagggc gtcgtacagc gtggcgagtg ctgctgggtc tgccaccgaa
      781 tcgggcgccc agaagcgcga ccgattgacc cggacgtacc actgggacac gtcgtcgatc
      841 atgagatcca tgattgcacg cacgccggta gtcacgtcgt acccgctcca cgcatcggct
      901 accttttcca ccaccccatc cactcggctc aagagccact ggtcggcaag tgacctttga
      961 gccgggtcgg gagcgtcggc cgggctccac tcacccgcgt acgccgcaaa gaactgatag
     1021 ctgttcttca aggcattcag gaacttgccc gcgacctccg gaatggtgcg gggatcgaac
     1081 cgcttgggca gccagacctg gctggaggcg agcagataca ggcggatagt atcggccccg
     1141 aactgctcga tcatctgcca gggatcggcc acattgcccc ggctcttgga catcttctgg
     1201 ccctctgcgt cgaggaccag ttcgttcacg atgacgtggc gataagcaag gctgtcgaac
     1261 gcggtggtag caatggcgag cagcgaatag aaccatcccc gcgtctgatc tacaccctca
     1321 cagatgaaat cggccggaaa gtgccgctcg aactctgctt tgtgctcgaa gggatagtgc
     1381 cactgggcat acggcatggc gccggagtcg aaccaggtat cgatcacctc cggagtccgt
     1441 cgcatcgtcc cgccgcagcg acacggccac acgtaccgat cgatgaacgg cttgtgagga
     1501 tcgaagtcgg ttggcaacgg cttgccccac cgctcagcca gcgtttcata gctgccgatc
     1561 acttcgatgt gcgacgagtc ctgatcgcac acccacaccg ggagcggcgt accccagtag
     1621 cggtcgcggg agagcgccca gtcgacgttg ttctccagcc attcgccgaa tcgtccggct
     1681 ccgacctccg gagggtg
//
LOCUS       DASRPQ010001637         1970 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1126334, whole genome shotgun sequence.
ACCESSION   DASRPQ010001637 DASRPQ010000000
VERSION     DASRPQ010001637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1970
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1126334"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..802)
                     /gene="trpD"
                     /locus_tag="VFD73_18600"
     CDS             complement(<1..802)
                     /gene="trpD"
                     /locus_tag="VFD73_18600"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HZI75993.1"
                     /translation="MIDDAPLRFAIQQIAQGRSLSQEATAAAFGVVMQGDAGPVQAAA
                     LLMGLRAKGETGAEVAGAAMALRCAMVRLELDAVDQMVDTCGTGGGQVTTLNISTAAA
                     FVVAGAGVPVAKHGNRSYTSRSGSADVLEALGVDIRLPRDRVGEVLDSAGLVFLFAPA
                     YHPAMKHLADVRKQLAVPTIMNLIGPLANPAGVVRQVIGVADPSRGPLLAHALAVLGI
                     RHALVLHAAVGMDEISPSGRTSVWEVREGKTSTWELNPADFGLECDDLD"
     gene            940..1740
                     /gene="truA"
                     /locus_tag="VFD73_18605"
     CDS             940..1740
                     /gene="truA"
                     /locus_tag="VFD73_18605"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HZI75994.1"
                     /translation="MSRTFLATLHYDGTGFVGWQRQPAGRSVQAEFERVLERLFTRRT
                     VAHAAGRTDAGVHATGQAVSFNAPSGWTHHALQRALNALLPRDCWVEAVAPMRAGFHA
                     RKSAASRRYRYDIGLDPSSSSPFRRPFEWALGRPLNLRLLDAAARELQGEHDFRAFAA
                     KSDKPHYRCRLSRSEWELRSEGRGVSFHVEADRFLHHMVRLLVGTMVDVGLERRPLLD
                     VTTLLAREDNHETSPPAPPQGLYFVAAGYSPELFEETTGLSGAAAHLV"
     gene            1718..>1970
                     /locus_tag="VFD73_18610"
     CDS             1718..>1970
                     /locus_tag="VFD73_18610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75995.1"
                     /translation="MRQPISSRAHRLVLLLGILSCRDTTPARLTVATAGVQTPKPVPQ
                     TQAAVTASRKTALVSAADRVSPAVVSINVTSRQQVTPQSP"
BASE COUNT          338 a          663 c          601 g          368 t
ORIGIN      
        1 cgtcgagatc atcacactcc agcccgaagt ccgccgggtt caattcccag gtgctggttt
       61 tcccttccct gacctcccaa accgaggttc gcccggacgg actgatctcg tccattccca
      121 ctgcggcatg gagtaccagc gcgtgccgga ttcccagcac ggccagagcg tgggccagca
      181 gcggccctcg cgagggatcg gcaacgccga tgacctggcg cacaactcct gccggattgg
      241 ccagcggtcc gatcaggttc atgatggtgg gcaccgcaag ctgctttcga acgtcggcca
      301 gatgtttcat cgcgggatgg taggccggcg caaacagaaa cacgagacca gctgaatcga
      361 gcacctcgcc cacccggtcg cgaggcagtc tgatatcgac tcccagcgct tccagaacat
      421 cggcagatcc ggagcgcgag gtatagctcc ggttcccgtg cttcgcgacc ggaacgcctg
      481 cgcccgcaac tacgaaagcc gcggcggtgg agatgttgag cgtggtgacc tgccctccgc
      541 cggttccgca ggtatcgacc atctggtcca cagcgtcgag ttcgagtcga accatggcgc
      601 agcgcagtgc catggcagca ccagctactt cggctccggt ctctcccttg gctctgaggc
      661 ccatcagcaa cgcggctgcc tgcaccggac cggcatcccc ctgcatgacc acgccgaagg
      721 cggcagcggt ggcctcctga ctcagggagc gcccttgggc gatttgctga atcgcaaagc
      781 gaagcggagc atcatcgatc acggcgtgag accggcggcg aagggtcgag cgcgatgggg
      841 aggaaggtcg aaattgtatt cgagcagtga ggcttttgtc aatcctgaca agcagttgcg
      901 acttgctccc gagcctcgga agcggctaaa ttccggccga tgagccggac cttcctcgcg
      961 acgctgcact atgacggcac cggcttcgtt gggtggcaac ggcagccggc cggtcgctcg
     1021 gtacaagctg aattcgagcg tgttcttgaa cgcctcttca cgcggagaac ggtagcccac
     1081 gcggccggac gaaccgacgc gggcgttcat gccaccggcc aagcggtgag cttcaacgct
     1141 ccttccggtt ggacccatca tgcactgcaa cgagcgctca atgcgctgct gccccgcgac
     1201 tgctgggttg aggccgttgc tcccatgcgc gccgggtttc acgcccggaa atcggccgca
     1261 agtcggcggt atcgctacga tatcgggctg gacccatcgt catcgtcacc cttccgtcgg
     1321 ccttttgagt gggcgctcgg gcgaccgctg aatctgcggc tgctcgacgc tgccgcccgt
     1381 gagctccagg gcgagcacga tttccgcgcc ttcgccgcca agtccgacaa gccgcattac
     1441 cgctgtcggc tttcccgctc ggagtgggag cttcgttccg agggacgggg tgtaagcttc
     1501 catgtcgagg ctgatcggtt tctgcaccac atggtccggc tgttggtagg cacgatggtg
     1561 gatgttggtc tcgagcgtcg gccgttgctg gatgtaacca ctctgctcgc ccgggaagac
     1621 aatcatgaga ccagtcctcc ggcgcctccg cagggcctct attttgtggc ggcgggctat
     1681 tctccagaac tcttcgagga gaccacagga ctctcgggtg cggcagccca tctcgtctag
     1741 agctcaccgg ctcgtcctct tgctcggcat tctcagctgc cgtgatacca ccccggcgcg
     1801 gctcaccgtc gcgacggcag gcgtgcagac acccaaaccc gtccctcaga cgcaggctgc
     1861 cgtcaccgcc tctcgcaaga cggcactggt ctccgcggcc gatcgagttt cccctgcggt
     1921 cgtctcgatc aatgtcacct cccggcagca agtcaccccc cagtctccct
//
LOCUS       DASRPQ010001638         1008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2380391, whole genome shotgun sequence.
ACCESSION   DASRPQ010001638 DASRPQ010000000
VERSION     DASRPQ010001638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2380391"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(65..>1008)
                     /locus_tag="VFD73_18615"
     CDS             complement(65..>1008)
                     /locus_tag="VFD73_18615"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI75996.1"
                     /translation="PSDLLRSMIAIAPVILLGAGLLGYWLAGTSLRPVEGIMDEVDAI
                     SDGTSLHRRLAVPVSGDEMARLAQTVNGMLARLEQSFASLHRFTADASHELKTPLQVL
                     RAGVERALTHPGTPAEIIQSLDETLAQINQMTEMVENLLTLARADEGRAPLAVEESDL
                     REVVADVAETAGMLGEDAGVTAVHAMPAHPVRLAVDRHRIREMLLNMVTNAIKYTPQG
                     GRVALTLEEDAEAVTFTVQDTGMGIAPGDLPHIFDRFWRADQARSRTGARPGTGLGLA
                     ITKWIAEAHGGTITVQSRPGRGSVFTVRLPKSPAATA"
BASE COUNT          173 a          349 c          311 g          175 t
ORIGIN      
        1 ccgaggacga gaggtctccc ccgcccaaca cccacgatct cagctgttgg ctttgagcag
       61 tcgctcaggc agttgctgca ggagacttgg gcaggcgaac ggtaaacacc gatccccgcc
      121 ccgggcgact ctgcacggtg atcgtcccgc cgtgcgcttc agcaatccac ttcgtgatgg
      181 ccagcccgag cccggtgccg ggtcgcgcac cggtgcgaga gcgcgcctgg tcggctcgcc
      241 agaagcggtc gaagatgtgg gggaggtcgc ctggggcgat gcccatcccg gtatcctgca
      301 ccgtgaaggt cactgcttcg gcatcttcct cgagcgtcag ggctaccctg cctccctgcg
      361 gcgtgtactt gatcgcgttg gtgaccatat tgagcagcat ctcgcgaatc cggtgacgat
      421 ccaccgctaa ccgtaccggg tgggccggca tcgcgtgaac tgcggtgaca ccggcatcct
      481 cgcccagcat acccgcggtc tccgcgacat cggccacgac ctcacgtagg tcactctcct
      541 ccaccgcaag cggggcccgg ccctcatccg cacgcgccag ggtcagcagg ttctccacca
      601 tctcggtcat ctgattgatc tgagccagcg tctcatccaa cgattggatg atctccgccg
      661 gcgtgcccgg atgggtgagc gcccgctcga cgccagcccg taggacctgc agcggcgttt
      721 tgagctcatg gctcgcatca gcggtgaatc gatgcagact ggcaaagctc tgctccaggc
      781 gggccagcat cccgttcacc gtctgggcca gtcgcgccat ctcgtcgccc gacactggca
      841 cggcaagccg acgatgaagg ctggtcccgt cggagattgc atccacctcg tccatgattc
      901 cctctaccgg gcgaaggctg gtccccgcca gccaataccc gagcaacccg gcgccaagca
      961 ggatgactgg agcaatggcg atcatggagc ggagcaggtc ggagggtc
//
LOCUS       DASRPQ010001639         1329 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3956302, whole genome shotgun sequence.
ACCESSION   DASRPQ010001639 DASRPQ010000000
VERSION     DASRPQ010001639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1329
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3956302"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(97..858)
                     /locus_tag="VFD73_18620"
     CDS             complement(97..858)
                     /locus_tag="VFD73_18620"
                     /inference="COORDINATES: protein motif:HMM:NF025687.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4386 domain-containing protein"
                     /protein_id="HZI75997.1"
                     /translation="MTEQTRGASPRQLARMAGALYLINIVLGAFATAIVPAMVVMSGD
                     AAATAHNIQTHELLYRLGLVAHLVVTVTNVPLALIFYELFKVVNRRLALLDAFFILVA
                     TAIEAAGLLNQFAPLVLLGSGAYASALPAAQLQALAYLPTVLSGIHYSIHTVFFGFDI
                     IIFAYLVLRSTFLPRAIGVLLAIDSLAYLVYSFTNLLAPGFAAQLVPWIQLPALIGEG
                     SLCLWLLLVGVDVERWKEWASAAIQMRSTEMGALE"
     gene            complement(1100..>1329)
                     /locus_tag="VFD73_18625"
     CDS             complement(1100..>1329)
                     /locus_tag="VFD73_18625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75998.1"
                     /translation="FRLVPRGISVVGLIGYAVVLFGSIAGWFGLIDVAPGGNGTIFAL
                     PVATFEIILLPFWLLFRGFKTPQAPERIIAE"
BASE COUNT          266 a          404 c          416 g          243 t
ORIGIN      
        1 ccggctcctg cgccaccaac aggtcgtcgg cttggctggc cagctctacg acctctacga
       61 cttcgagtgg gtcgtatctg caacagacca cagctttcat tccagtgccc ccatttccgt
      121 ggaccgcatc tggattgccg cgctcgccca ctccttccat cgctcgacgt ccacgccgac
      181 caggaggagc cacaggcaga gcgatccttc accaatgagc gcgggcagtt ggatccaggg
      241 gaccagctgg gctgcgaacc ccggtgccag gaggtttgtg aagctataga ccaggtaggc
      301 caggctgtcg atcgccagca ggacgccgat ggctctgggg aggaacgtcg acctgagcac
      361 gaggtacgcg aagatgatga tgtcgaagcc aaagaacacc gtgtggatgc tgtagtggat
      421 ccccgacagg acggtgggca ggtacgccag cgcctgcagc tgtgccgccg gaagagcgct
      481 cgcataggct ccgctgccca gaagcaccag aggtgcgaac tggttaagga ggccggcggc
      541 ctcgatggcc gtcgcgacca ggatgaagaa cgcgtccagc agggcaagcc ttcgattcac
      601 caccttgaac agttcgtaga agatgagcgc cagggggacg ttggtcacgg tgaccacgag
      661 gtgcgccacg aggccgagcc ggtaaagcag ttcgtgcgtc tggatgttgt gggccgtggc
      721 tgccgcatcg ccggacatga ccaccatggc gggaacgatg gcggtggcga aggcacctag
      781 gacgatgttg atcaggtaca gggcaccggc cattctggcc agctggcgtg gcgacgctcc
      841 tcgcgtctgt tccgtcacgt gaggatctcc tgtccgttgt tgtaagtcgt ggggctcgat
      901 cctggcccca ggttgtgctt tcatgtgttt cctccaagtt tgcattgatt cagtcgttca
      961 tttcctgttg gacatctaac gccactgctt ggtcgggttt cacgcacacg accgagagca
     1021 atggcattgc tccatcacgc acttttctga gcaagccatc cgcggcggcc cctctccgga
     1081 ccaccgggtg cgggagcgtt cactccgcta tgatgcgctc gggcgcttgc ggtgtcttga
     1141 agcccctgaa caacagccag aaagggagaa ggatgatctc gaacgttgcg acgggaaggg
     1201 caaagatcgt cccgttgccc cccggtgcca cgtcgatcag accgaaccag ccggcaatgc
     1261 tcccgaacaa gaccacggcg tagccgatca aacccaccac agagatacct cgcggaacga
     1321 gtcggaacc
//
LOCUS       DASRPQ010001640         1451 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1126796, whole genome shotgun sequence.
ACCESSION   DASRPQ010001640 DASRPQ010000000
VERSION     DASRPQ010001640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1451
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1126796"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..393)
                     /locus_tag="VFD73_18630"
     CDS             complement(94..393)
                     /locus_tag="VFD73_18630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI75999.1"
                     /translation="MTYVARMAPRWIETKDYRDTVLDPPQPEDDLMLLSGEFVIGRVL
                     RGRSGPQAGRYSWSLTGIHGAPIQNQGTVDTLEQAQAELAAAWRRWQDWAEVRDK"
     gene            410..736
                     /locus_tag="VFD73_18635"
     CDS             410..736
                     /locus_tag="VFD73_18635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76000.1"
                     /translation="MPQDRLTQPVKPIGHPVVTTVEQACEYMLGLTEKDALLTHWQHA
                     ARLGLVARSGLLALLRNDAELHSAILDVENRVCGFSLREDNVAFAISGDRLALADIAE
                     KSLEIG"
     gene            complement(921..>1451)
                     /locus_tag="VFD73_18640"
     CDS             complement(921..>1451)
                     /locus_tag="VFD73_18640"
                     /inference="COORDINATES: protein motif:HMM:NF015971.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76001.1"
                     /translation="TTDFQSFRMVPLGGSAIGNKGMALFPRKIDGRYAMIGRQDNENL
                     YLIYSDDLHTWDAGRPILQPQYPWEFVQIGNCGSPVELDDCWLLLTHGVGPVRKYSIG
                     AVLLDKKDPSKVLARSRQPLVYPEPTEREGYVPNVVYTCGAMRHGDQIMLPYAVSDTF
                     TSFATIRIAELMQAVS"
BASE COUNT          253 a          473 c          441 g          284 t
ORIGIN      
        1 gcttcccgat gtagcataca attgtgcggg cggtggtcag gccgcctgca tgaccctgag
       61 ccccggcagt ggtgatgcct gccagggctt ccctcacttg tcccgcacct cagcccagtc
      121 ctgccagcgg cgccatgcgg ccgctagctc ggcttgcgcc tgctcgagcg tgtcgaccgt
      181 cccctgattt tggatcggcg ccccatgaat ccccgtgagc gaccaggagt agcggcccgc
      241 ctgggggcca gagcggccgc gcagcacgcg gccgatgacg aactcgcccg agagcagcat
      301 caaatcgtcc tccggctgcg gcgggtcaag gaccgtgtcg cggtaatcct tggtttcgat
      361 ccatcgaggg gccatacgag caacgtaggt cacccaacaa ctctcgacaa tgccgcaaga
      421 ccgcctcacc cagccggtca agccgattgg ccatcccgtt gtcaccacgg tggaacaagc
      481 ctgcgagtac atgctggggc tgacagagaa ggatgccctg ttgacccact ggcagcacgc
      541 agcgcggctc ggcttggttg cacgcagcgg cctccttgcc ttgctcagaa acgacgctga
      601 gcttcactct gccattctgg atgtagaaaa ccgcgtctgc gggttctccc tgcgcgaaga
      661 caacgtcgcc tttgcgatat ctggcgatcg tcttgccctc gccgacattg ccgagaaatc
      721 tcttgagatc ggatgaggct ctcccgccct gggctcgctt ggtcacgcag actcccgatt
      781 gtttcggccc gggctgcctg ccaaccgaca ggtcccccgt tcgggtcatc ggttgcggcg
      841 ccgccccgac tggtctagcc catcagcgcc tcccggccta gggctaagct gcccgatgaa
      901 gagtgcgtgc ttgacggcct tcagctcacg gcctgcatca gctctgcaat cctgatcgtg
      961 gcgaagctgg tgaatgtgtc ggacaccgca tagggcagca tgatctgatc gccgtgacgc
     1021 attgcgccgc aggtatagac gacgttcggc acgtaacctt cccgttccgt gggttccggg
     1081 tagaccagag gttggcgcga gcgggccaga accttcgagg gatctttttt gtccaggaga
     1141 accgctccga tcgaatattt cctgaccgga ccgactccgt gcgtcagcag cagccagcag
     1201 tcgtcgagct cgaccggaga cccgcagttg ccgatctgca cgaactccca cggatactgg
     1261 ggctgcagga tgggtcggcc ggcgtcccac gtgtggagat cgtcggaata gatgagatag
     1321 agattctcgt tgtcttgccg tccgatcatc gcgtagcggc cgtcgatttt gcgcgggaac
     1381 agcgccatgc ccttgttccc gatcgccgat ccgccgagcg ggaccatccg gaatgattgg
     1441 aaatccgtcg t
//
LOCUS       DASRPQ010001641         4329 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2736111, whole genome shotgun sequence.
ACCESSION   DASRPQ010001641 DASRPQ010000000
VERSION     DASRPQ010001641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4329
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2736111"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..659)
                     /locus_tag="VFD73_18645"
     CDS             complement(<1..659)
                     /locus_tag="VFD73_18645"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76002.1"
                     /translation="MVDVLHGEAISDPYRWLEDGNASETIEWTERQNAFTSAYLEAVP
                     GRQRIRQRLEQLLSIGVLGTPEPAGKHYFYLRRDGSENHPVLYWRAGVAGEDRVAVDP
                     NQLSPSGTIALDWYYPSRDGRLLAYGLSEDGSEESVLHVLEVERGELLPDRISRMRAA
                     SLAWLPDASGFYYTRYPAPDSVPQGEEHYHRTIYFHRLGTDPETDPLIYQPERKEYWP
                     GV"
     gene            complement(717..1796)
                     /locus_tag="VFD73_18650"
     CDS             complement(717..1796)
                     /locus_tag="VFD73_18650"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF002872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006002 - fructose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent 6-phosphofructokinase"
                     /protein_id="HZI76003.1"
                     /translation="MRIAISTGGGDAPGLNAVIRAVVLSAHYRGWKSYGIQRGYEGLL
                     TFDGVVPLGLAQVRGITHIGGTILGTTNRGNPFHYITKDANGKEQEVDRSNDLVAAFQ
                     ASGFDALVSIGGEGSLQISYELWKKGLPVVCVPKTIDNDVSGTQRSFGFDTAVSTATE
                     AIDRLHSTAESHNRVMVVEVMGRYAGWIALYSGLSGSADVILLPEIPFNIEKVCAKIR
                     SREAAGRHFSIVVVAEGARSMDGNVELVERRGIGTVDRLGGIGSKVARAIEVYTGKET
                     RTLVLGHLQRGGSPTTYDRLLALRFGAAAVRAIAEGAFGVMVGVQGPGIQQVSLEEIV
                     GRPKNVPLDSDTITTARELGISLGD"
     gene            complement(1800..2036)
                     /locus_tag="VFD73_18655"
     CDS             complement(1800..2036)
                     /locus_tag="VFD73_18655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_255349558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(2004..2006),aa:Sec)
                     /transl_table=11
                     /product="SelT/SelW/SelH family (seleno)protein"
                     /protein_id="HZI76004.1"
                     /translation="MLITIQYCVVUNYQPRAAGLAAELQRAFPDAEVRLVQSSGGVFD
                     VKADNTLVFSKKAAGRHAAPGEVLKAIERLRGAT"
     gene            2170..3735
                     /locus_tag="VFD73_18660"
     CDS             2170..3735
                     /locus_tag="VFD73_18660"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HZI76005.1"
                     /translation="MLTYRHPTKGLARVLLLLGVLVCIRMAPPAAAQERRYLFEVGAA
                     GAYQSYGGVTKLGSSPGGLARVGVWLPLNFSVEAEGAISSSDTVGVKTGSVSALYNLL
                     LGTATWGYVKAGFGGTRYGGSGSDCNQPKFVGKICGTTTTFLAGLGVRIPISQMFLFR
                     GEGVIYPNRGRTVVAGSAPADTQKVTFSNFGLNLGVSVMLGSKPIPDSDGDGVLNNRD
                     RCANTPAGAQVNELGCPTDSDGDGVADGIDRCPNTPVGAIVDALGCTRDSDGDNIADG
                     IDKCPDTPAGVLVDAKGCPRDSDGDGIPDGLDRCSATPKGATVDALGCPGDEDADGVL
                     DGLDRCPRTPIGATVNSNGCTAGQQPRQQSRTAPPDTSKAVPPSPPPAQAPPAQTAPA
                     QTPNPLAPPSPSPGAPAVLEGVTFETGSARLQPGSYVALDSVATVLLANPKMKVEIGG
                     HVDNAGTPADNQHLSTLRAEAVRNYLVAKGVPFQQMVARGYGASMPRTPDTTPQGRAA
                     NRRIEIRQLPPGS"
     gene            3807..4229
                     /locus_tag="VFD73_18665"
     CDS             3807..4229
                     /locus_tag="VFD73_18665"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HZI76006.1"
                     /translation="MMLAMRVGLVLVLAVAGAGSAAAQSSDKASTPKDTSSKAAAGGA
                     AITPELIAQGDKIFHGPGNCYACHGTNAQGSVGPNLTDAEWIHSKGTYEDIVAQVMKG
                     VPKEESKSGIVMPPRGGSTISDDDVKAVAAYVYSLSHK"
BASE COUNT          806 a         1415 c         1326 g          782 t
ORIGIN      
        1 acgcctggcc agtactcctt ccgctccggc tggtagatca gcgggtcggt ctccggatcg
       61 gttcccagtc ggtggaagta gatggtgcgg tggtagtgct cctctccctg cggcacgctg
      121 tccggagcgg gatatcgggt gtagtagaag ccgctcgcgt ctggcagcca agcgagggag
      181 gcggcgcgca tccggctgat ccggtccggc aggagctcgc ccctctccac ctccaggaca
      241 tggagaacgc tctcttcact gccgtcctct gaaaggccat aggccagcaa ccggccgtct
      301 ctgctcggat agtaccagtc gagggcgatc gtacccgatg gactgagctg attgggatcg
      361 acggctaccc gatcttcccc agccacgcca gcccgccagt agagcaccgg gtggttctcg
      421 ctgccgtctc tgcggagata gaagtagtgc ttgcccgcgg gctctggtgt tcccagcaca
      481 ccgatcgaga gcagctgctc caaacgctgc cggattcgct gtcggccggg caccgcctcc
      541 aggtaagccg aggtaaacgc gttttgccgt tcagtccatt ctatggtctc ggaagcattc
      601 ccgtcttcca gccagcggta cggatcggag atggcctctc catggaggac atcgaccaca
      661 ggttcgactc gtgtgggagg atacgacatc atggaggagt gggaggtgaa gacgagctaa
      721 tcccccaagc tgatgcccag ctctcgcgcg gtggtgatcg tgtcggagtc gagcggcaca
      781 ttcttggggc gacccacgat ctcctccaga ctgacctgct ggattcccgg cccctgcaca
      841 ccgaccatta ctccgaaggc cccttccgca atcgcccgga ctgccgcggc gccgaaccgg
      901 agcgccagca gtcgatcgta ggtagtgggt gaaccgccgc gctgcaggtg cccgagtacc
      961 agcgtccggg tctccttacc ggtatacacc tcgattgccc gggcgacctt gctcccgatt
     1021 ccccccagcc gatccacggt cccgatcccc cgccgctcga ccagctcgac gttgccgtcc
     1081 atcgatcgag caccttctgc caccaccacg atgctgaaat ggcgtcctgc cgcctctcgg
     1141 ctgcggatct tggcgcacac cttctcgatg ttgaatggga tttcgggaag caggatgacg
     1201 tcggcactcc cggacagacc gctatagaga gcgatccacc cggcgtagcg gcccattacc
     1261 tccacgacca tgacgcgatt atggctttcg gcggtcgaat gcagccgatc gattgcctcg
     1321 gtggcggtac tgaccgccgt atcgaatcca aaggagcgct gagtgccgct gacgtcgttg
     1381 tcgatcgtct tgggcacgca gacgactgga agtcccttct tccagagctc gtacgagatc
     1441 tgcaggctgc cctcaccacc aatggagacc agggcgtcga agccgctggc ctggaaagcg
     1501 gcgacaaggt cattggagcg atcgacctcc tgctctttcc cattggcgtc tttggtgatg
     1561 tagtggaagg gattgccccg gttggtggtg cccagtatgg tgccgccgat atgggtgatt
     1621 ccgcgcacct gtgccaggcc cagaggaacc acgccgtcga aggtgagcag cccctcgtag
     1681 ccgcgctgga tgccgtagga cttccatccg cggtagtgcg ccgacaagac gacggcgcga
     1741 atgaccgcgt tcagtccagg agcgtcaccg ccgccggtcg agatcgcgat ccgcatcggt
     1801 cacgtcgcac ctcgcagccg ctcgatggcc ttgagcactt cgcccggggc tgcatgcctt
     1861 cccgcagcct tcttcgaaaa aaccagcgtg ttgtcggcct tgacgtcgaa cactccgccg
     1921 gatgactgca ccagacgcac ttcggcgtcg ggaaaagcac gttgcaattc ggccgccaga
     1981 ccggcagccc gcggttgata gtttcaaacg acgcaatact ggattgtgat gagcatctga
     2041 cagacctctg acggatggag ctggaccgcc gcgaatcgta gtggcgccct gagaagattc
     2101 caagggcagc accgtgcgtg tgacggccat ccttgtcagg ccgatctgac ggtcgtatct
     2161 atttgatcca tgctgaccta ccgtcacccc accaaggggt tggcccgggt gctgctgctc
     2221 ctgggcgtac ttgtgtgtat ccggatggcg ccgccggctg cagcccagga acgccggtac
     2281 ctctttgagg taggtgccgc cggggcatac caatcgtacg gcggtgtcac caagctggga
     2341 tcatcgcccg gcggtttagc ccgagtgggt gtctggttgc cgctcaactt ttcggtcgag
     2401 gccgaaggag cgatttcgag ctccgacacc gttggagtga agaccggttc ggtctccgcg
     2461 ctctacaacc tgctccttgg cacggcaacg tgggggtacg tcaaggccgg attcggggga
     2521 acccgatatg gcgggagcgg cagcgactgc aaccagccga agttcgtcgg caagatctgc
     2581 ggcaccacaa cgacgttcct tgccggtctg ggagtccgca tcccgatcag ccagatgttc
     2641 ctcttccgtg gcgagggtgt catttacccc aaccggggaa ggaccgtggt cgccggctcc
     2701 gcccctgcgg acacccagaa ggtgaccttc tccaatttcg gcctgaacct cggcgtcagc
     2761 gtcatgctgg gcagcaagcc gattccggac agcgacggcg acggggtcct gaacaatcgg
     2821 gaccgctgcg ccaacacccc cgctggggcc caggtgaacg agctcgggtg ccccaccgat
     2881 tcggacggcg atggtgtggc cgacggcatc gatcgctgcc ccaacacgcc agtcggcgcc
     2941 atcgtggatg cgctcggttg tacccgggac agcgatggag acaacatcgc tgacggcatc
     3001 gataagtgcc ccgacacccc tgctggcgtc ctggtcgacg caaagggttg tcctcgggac
     3061 agcgatggtg acggaattcc cgacgggctg gaccgctgct ccgccacgcc caagggcgcc
     3121 acagtcgacg ccctcggctg ccccggcgat gaagatgctg atggagtgct cgatggcctg
     3181 gatcggtgtc cccgaacacc aatcggggct accgtcaatt ccaacgggtg tactgcggga
     3241 cagcagcccc ggcagcaatc ccgcactgct cctccggaca cgtccaaggc cgttcctcca
     3301 tccccgccgc cggcgcaggc gccaccagcg cagacggccc cagcacaaac gcccaatcca
     3361 ctggcgcctc cctctccgtc tcctggtgca ccggcggtgc tcgagggcgt caccttcgag
     3421 accggaagtg cccggctcca gcccggctca tatgttgcgc tggactcagt cgccacggtg
     3481 cttctggcaa acccaaagat gaaagtggag atcggcggac acgtggacaa tgcaggcacg
     3541 ccggcagaca atcagcacct ttcgaccctc cgagccgaag cggtgcggaa ttatctggtc
     3601 gcgaagggag ttcccttcca gcagatggtc gcacgaggat acggagcgag catgcctcgc
     3661 actcccgaca ccactcctca ggggcgcgcc gcgaatcgcc ggatcgagat tcggcagttg
     3721 ccaccggggt cttaggatta ctctcaatac ttgaccggta tccactgccg ggtatgctac
     3781 taaagaggct tcagccagga gattcgatga tgttggccat gcgtgtcggg ctcgtgctcg
     3841 tccttgcggt tgccggcgcg ggaagcgcgg ccgcccagtc ttcagacaag gcgtctactc
     3901 ccaaggacac ttcgagcaag gctgcggccg gaggcgccgc gattaccccc gagctcatcg
     3961 ctcagggaga taagatcttt cacgggccag gcaactgcta cgcctgccat ggtaccaatg
     4021 cccaaggttc agtaggacct aacctcaccg acgccgagtg gatccacagc aagggcacct
     4081 atgaagacat cgtggcccag gtaatgaagg gcgtccccaa agaggaatcg aagagcggca
     4141 tcgtcatgcc ccccaggggc ggtagcacca tcagcgacga tgacgttaaa gccgttgccg
     4201 cctacgtgta ctcgctgagt cacaagtaaa tctcggctcc gctagatccc ccgcccggat
     4261 agcgctccga gcgaatacca ggccccaaac accactccgg ctgtgccgaa caaaggaacc
     4321 agttcggcc
//
LOCUS       DASRPQ010001642         1302 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4587883, whole genome shotgun sequence.
ACCESSION   DASRPQ010001642 DASRPQ010000000
VERSION     DASRPQ010001642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1302
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4587883"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..712
                     /locus_tag="VFD73_18670"
     CDS             <1..712
                     /locus_tag="VFD73_18670"
                     /inference="COORDINATES: protein motif:HMM:NF017024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydrodipicolinate reductase C-terminal
                     domain-containing protein"
                     /protein_id="HZI76007.1"
                     /translation="LMTSLRIAVIGNGKMGKAVAALARERGHTIGTIVGHVENPAGRA
                     LTAERLKGMDIAIEFTRPDAVVANLERLIPLGIPTVTGTTGWTDALPNIELLVQREGG
                     ALLHAANFSVGVHLFFRAAKALAQCFRGRPEFAVTIHEEHHASKLDAPSGTALLLQQQ
                     LWQAEPGRRFPITSVRAGDAPGAHTLKYEAKHETVTLQHVSRSRDVFAAGALAAAEWL
                     PGHHGVFTFEDMLFEGER"
     gene            709..>1302
                     /gene="dapA"
                     /locus_tag="VFD73_18675"
     CDS             709..>1302
                     /gene="dapA"
                     /locus_tag="VFD73_18675"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HZI76008.1"
                     /translation="MSRLQGCGTALVTPFTDDGALDLASLRNLVDWQITEGIDFLVAC
                     GSTGEAQTLKQAERERVVASVLEVAAGRVPVMAGATSNDTTQAVDETERMCRLGADYI
                     LSATPYYNKPTPEGLCRHFLAVADAATRPVCLYNVPGRTAVNLKPSLALQLAEHPNVM
                     GIKEASGDLKQVMDILEARTDDFAVFSGDDWLTLPVIC"
BASE COUNT          245 a          412 c          428 g          217 t
ORIGIN      
        1 actgatgact tccctgcgca tcgccgtcat cggcaatgga aagatgggca aggcggtggc
       61 tgcccttgcc cgggaacgcg gacataccat cggcaccatc gtggggcacg tggagaaccc
      121 ggcgggccgg gcactcaccg cggaacggct gaaagggatg gatatcgcca ttgaattcac
      181 ccgccccgat gcggtggtgg ccaatctcga gcggctgatt cccctgggta tcccaaccgt
      241 caccggaacg accggctgga cggacgcact accaaacatc gagctcctgg tccagcgcga
      301 aggcggtgca ttgctgcacg ccgccaattt ttcggtcggt gtgcacctct tcttcagagc
      361 ggccaaggca ctggcccagt gctttcgggg tcggccggag ttcgccgtca ccattcacga
      421 ggagcatcac gcctcgaagc tcgacgcgcc atccggcacc gccctgctgc tccagcagca
      481 actctggcag gccgaaccgg ggcggcggtt ccccatcact tccgtccggg cgggagatgc
      541 cccaggagcc catacgctca agtacgaggc caaacatgag accgtcacac tgcagcacgt
      601 gagccgaagc cgagacgtgt tcgcggcagg cgccctggcg gcggccgaat ggctgccggg
      661 acatcacgga gtgttcacct tcgaggacat gctcttcgag ggtgagcggt gagccgactc
      721 caggggtgtg gcaccgcgct ggtaacgccg ttcacggatg atggagcgct ggacctggcg
      781 tcgctccgga atttggtcga ctggcagatt accgaaggga ttgatttcct cgtcgcctgt
      841 gggtccaccg gagaagccca gactctgaag caggccgagc gagagcgtgt cgtggcgtcg
      901 gtcctggagg tggccgctgg acgggtgccg gtcatggccg gcgccaccag caatgatacc
      961 acccaggcgg tcgatgagac ggagcggatg tgccggctgg gagcagacta catcctgagc
     1021 gcgaccccct actacaacaa accgacgcca gaaggactct gccgccattt cctggcggtg
     1081 gccgacgcgg ccaccaggcc ggtctgtctg tacaacgtgc ccggccgaac cgctgtcaac
     1141 ctgaaacctt cgcttgcgct ccagttggcg gagcacccca acgtcatggg gatcaaggag
     1201 gcgagcggcg atctgaaaca ggtgatggac atcctcgagg cacggaccga tgactttgcg
     1261 gtgttctcgg gcgacgactg gctgacactg ccggtgatct gt
//
LOCUS       DASRPQ010001643         1139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2736207, whole genome shotgun sequence.
ACCESSION   DASRPQ010001643 DASRPQ010000000
VERSION     DASRPQ010001643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2736207"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            130..203
                     /locus_tag="VFD73_18680"
     tRNA            130..203
                     /locus_tag="VFD73_18680"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:164..166,aa:Thr,seq:ggt)
     gene            214..285
                     /locus_tag="VFD73_18685"
     tRNA            214..285
                     /locus_tag="VFD73_18685"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:246..248,aa:Asn,seq:gtt)
     gene            294..380
                     /locus_tag="VFD73_18690"
     tRNA            294..380
                     /locus_tag="VFD73_18690"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:330..332,aa:Ser,seq:gga)
     gene            390..459
                     /locus_tag="VFD73_18695"
     tRNA            390..459
                     /locus_tag="VFD73_18695"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:421..423,aa:Trp,seq:cca)
     gene            466..537
                     /locus_tag="VFD73_18700"
     tRNA            466..537
                     /locus_tag="VFD73_18700"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:499..501,aa:Gly,seq:gcc)
     gene            544..615
                     /locus_tag="VFD73_18705"
     tRNA            544..615
                     /locus_tag="VFD73_18705"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:577..579,aa:Asp,seq:gtc)
     gene            623..694
                     /locus_tag="VFD73_18710"
     tRNA            623..694
                     /locus_tag="VFD73_18710"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:655..657,aa:Ile,seq:cat)
     gene            904..976
                     /locus_tag="VFD73_18715"
     tRNA            904..976
                     /locus_tag="VFD73_18715"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:938..940,aa:Gly,seq:gcc)
BASE COUNT          207 a          370 c          364 g          198 t
ORIGIN      
        1 aagagcatac aaactggaca agttcggctg taaaccgaac gagtaggttc gactcctaca
       61 agccccccct tcactcggta atcatggggg cttcaaaagc tgctcatgcg acttgtacgg
      121 ccgcctcttc agggtgtggg agagcctggt aatccgccgg cttggtgtgc cggagagcgt
      181 cggttcaaat ccgaccatcc tgactgaagt cactgtcccg tagcacaacg gtggtgcggc
      241 tggccgttac ccagacggtt gcaggttcga gccctgccgg gacagctttt tacggaaggg
      301 cgagccaaca ggcacgatgg cacccgcctg gagagcgggc gaggcgcacg cccttgcagg
      361 ttcgagtcct gtcccttccg ctgaccgaca agggcgtgct cctgggagag cagcctgcct
      421 ccaaaccagg cacagagggt tcgactcctt ccgcccttgc tgaccgtggc cgtggccgag
      481 cagcccaggc gccgacctgc cacgtcggac aggcgggtgc gactcccgcc ggacactctt
      541 tccgccctgt gacgcagcgg gtgtggcgac ctgcctgtcg agcaggcgag acgggttcga
      601 gtcccgtaca gggggctgac ctcgggccgt ggccgagcgg ccaggcagcc gtctcatgag
      661 cggtcgaagg caggttcgac tcctgccggc ccgactctgt cagtaccgtg gagcagcccg
      721 aagtgctcgc cgcgccccca tcgcggaggc cgctggttcg accccagctg ccggaactgg
      781 caaccgtgcc ccacgaccgc agcgtacaaa ctcgctgatt gggttcagca ccagtctcgt
      841 aaactggagg agtcggcctc aagccggcct ctgtggctgc ggcgactcgc acgggggcca
      901 agcgcgtcca tgatgtagcc gggcagcctg gcacctcgcc agggtggatg cgggggttca
      961 actccccctg gacgctctgg ggtcccgtac ccaacggcaa gagcatacaa actggacaag
     1021 ttcggctgta aaccgaacga gtaggttcga ctcctacaag cccccccttc actcggtaat
     1081 catgggggct tcaaaagctg ctcatgcgac ttgtacggcc gcctcttcag ggtgtggga
//
LOCUS       DASRPQ010001644         1088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1465803, whole genome shotgun sequence.
ACCESSION   DASRPQ010001644 DASRPQ010000000
VERSION     DASRPQ010001644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1465803"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="VFD73_18720"
     CDS             <1..282
                     /locus_tag="VFD73_18720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76009.1"
                     /translation="DEHQVRCWHSWYRWTTLAMLALAFLSITAATEHAHPPPAGQIPL
                     TRNEIAALFSTLIIKPVTGTPPRLRWSAWRRRHQHRAKTCHYQRQARQS"
BASE COUNT          200 a          380 c          314 g          194 t
ORIGIN      
        1 gatgagcacc aggtccgctg ctggcactcc tggtaccgct ggaccaccct ggccatgctc
       61 gccctggcgt tcctgtccat caccgccgcc accgagcacg cccatccgcc gccagccggt
      121 cagatcccgc tcacccgcaa cgagatcgcc gcactgttca gcacgctgat catcaagcca
      181 gtgacaggaa ccccgccccg gctgcgatgg tccgcctggc gcaggcgcca ccagcatcgc
      241 gccaaaacct gccactacca gcgacaagcc cgccaatcat gaaggtcacg aagtccggtt
      301 ggagtattag actggcgata acctgcgctt ttgactctcg gcagttctca tcgcttcacg
      361 ctatgttcgg cgttcatgtg ccctcgatgt gccctgtcgg gggccacact gcacggcccc
      421 aacctggtgt agcggcgata gccaacatga aaaggtccct gcactcactg ctggtgagtc
      481 catccatctg aactctgatt ccgttgggaa gggtcatgtc catgcggcgc ggtgcccagg
      541 tgtttgagta ttcgaatccg aagcttctag cgcccacccg caaactgcgc tgcacctgga
      601 cccggcccag agtgcgatct cgatgcaggc cctgcgtccc gcgttggggc ggagagtacc
      661 aaaggcacag gcttccgata atcccggtct ctggctgaag tgagcgtagc cgacgcgcat
      721 cctcctcgct actcgattgt ctcggccgag tccgccgtgt caaggccaag ccgcacgcgg
      781 tcgcttcgcg agccttgaca cgacggccac ggcctgaggg acggcagcta tcgaggagga
      841 tggggaggac cagggcacga ccattagtcc agaccggacc gcggttcgcc gggccattag
      901 cgggccatta accccggtga cgagcggtct ctcacggtca ctcgcggaca ccccgacccg
      961 caggtcaggc catgtgatag gcccggacgg cactgcttcc caagctgata gtgcgggttc
     1021 gattcccgtc acccgctcca cggtaaaacc gcaggtcaga tccagcttcc cgcgttcgtt
     1081 cgcggacc
//
LOCUS       DASRPQ010001645         1957 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4261020, whole genome shotgun sequence.
ACCESSION   DASRPQ010001645 DASRPQ010000000
VERSION     DASRPQ010001645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1957
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4261020"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            118..927
                     /locus_tag="VFD73_18725"
     CDS             118..927
                     /locus_tag="VFD73_18725"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HZI76010.1"
                     /translation="MSRGRLLVALVVAVISILGYYGSSVINPVTNEKQHVGNITPEQE
                     IALGLQAAPEMEQQFGGEDPDANAQAKVDEVGQRLVSRSAAGKTPYRFDFHLLNDPET
                     INAFALPGGQVFITDGLLRRLKTEGQLAGVLGHEIGHVVARHGAEQIAKQQLTQGLTG
                     AAVLATYDPNNPSSRNSAAVAAMIGQLVTMRFGRQDELEADHLGVRLASESGYDPRSM
                     IDLMKILEESSQGNQPPEFFSTHPNPQNRIQRIQEAIKEQYPNGVPAGLEK"
     gene            complement(1194..>1957)
                     /locus_tag="VFD73_18730"
     CDS             complement(1194..>1957)
                     /locus_tag="VFD73_18730"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HZI76011.1"
                     /translation="TIQLLGDPYDPPARRELPRGRRLADPGFMTRFPGGKVEIGGSIR
                     SLSPFWIDVLPVTNGDYLTFMAAGGYTDREVWSEEGWEWLEISRAKMPEYWSWDDGVW
                     WSRCLLQETPLDLTRPVIHVSCYEAEAFARFVGKRLPSEIEWEAAAGWDPETQSRRLY
                     PWGNMAPTPHVANLDQLAFAPAPVGAFPGNLSPIGCYGMIGDIWEWTSSDFDDESKVL
                     RGGSWATRTGAIDVSVRRASRPENRKMFSGFRCAM"
BASE COUNT          393 a          633 c          607 g          324 t
ORIGIN      
        1 attcctacgc tgatgctacc gccgtaccgc cgtacccccc gccatccgca cgtgaggggt
       61 gtcaccgtca ctgagggcaa aggtatgtag cttggcctgc taatccagga ggttgccatg
      121 tcccgaggcc gactgctagt cgctctggtt gttgcggtta tctccatcct cggctactac
      181 ggtagcagcg tcatcaatcc ggtcaccaac gagaaacagc acgtcggcaa tatcactccc
      241 gaacaagaga tcgcgctcgg gctccaggca gcaccggaga tggagcagca gttcggcgga
      301 gaagatcccg acgccaacgc tcaggccaag gtcgatgagg ttggacaacg gctggtctcc
      361 cggagcgccg caggcaagac tccctaccga ttcgactttc acctgctgaa cgatcccgaa
      421 acgatcaacg cattcgccct gccgggcggt caggtgttca tcaccgacgg actgctgcgc
      481 cggctcaaga ccgaagggca gctcgccggt gtgctgggcc acgagatcgg ccatgtcgtg
      541 gcgcggcatg gagcggagca gatcgcgaag cagcagctca cgcaggggct gaccggcgcc
      601 gcggtgctgg cgacctacga tcccaataat ccatcgagcc gcaactcggc ggcggtcgcc
      661 gcgatgatcg ggcagctggt cacgatgcgg ttcggccgac aggacgaact ggaagccgat
      721 cacctcggcg ttcgcctcgc cagcgaatcg gggtacgacc cgcgttcgat gatcgacttg
      781 atgaaaattc tggaggagag cagtcagggg aatcagccgc cggagttctt cagcacgcat
      841 ccgaatccgc agaaccggat tcagcgcatt caagaagcga ttaaggagca gtatccgaac
      901 ggtgtccctg cgggattgga gaagtagggg agcggactgg agggtaactg atctgcggga
      961 ctgtcgaacg acttcgcggt agtggtcggg tgcgccgaca cccttccggg ccgctggagg
     1021 gcgcatgtca cgagtaaatc ccaacaaact cgaccagcgc cctacgcggc ctccagggtg
     1081 atcggcgcac cctcctgcca ctctccgatt gcagcggcca gaaagcgcct gaccgtctga
     1141 ccgtctgacc gcctgaccgc ctgaccgcct gaccgcctga ccgcctgacc gccttacatc
     1201 gcgcagcgga agcccgagaa catcttgcgg ttctccggac ggctcgcgcg gcggactgag
     1261 acatcgatcg cgccggtccg agtggcccag gagccgcctc gcaatacctt gctttcatca
     1321 tcaaagtcgc tgctggtcca ctcccagata tcgccgatca tgccgtaaca gccgatcggc
     1381 gacaggttgc cgggaaacgc cccgaccggc gccggcgcaa aggcgagctg atccaagttg
     1441 gcgacgtggg gagtgggggc catgttgccc cacgggtaca agcgccgtga ctgcgtttcc
     1501 ggatcccatc ccgcagccgc ctcccattcg atttccgatg gaagccgctt tccgacaaac
     1561 cgggcgaacg cctcggcttc atagcaggac acgtggatca ccggacgggt gagatcgagc
     1621 ggagtctcct gcagcagaca gcgactccac cagaccccat cgtcccagga ccagtactcc
     1681 ggcatctttg cccgggagat ctcgagccac tcccagcctt cctcggacca gacctcccgg
     1741 tcggtatagc ctcccgcggc catgaaggtc agatagtcgc cgttggtcac cggcaataca
     1801 tcgatccaga aaggcgagag tgaacggatg ctgccaccga tctccacctt gccaccggga
     1861 aagcgggtca tgaagccggg atcggcgaga cgccggcctc ggggaagctc tcggcgcgcg
     1921 ggaggatcgt aggggtcgcc caggagctga atggttt
//
LOCUS       DASRPQ010001646         2760 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3666168, whole genome shotgun sequence.
ACCESSION   DASRPQ010001646 DASRPQ010000000
VERSION     DASRPQ010001646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2760
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3666168"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="VFD73_18735"
     CDS             <1..255
                     /locus_tag="VFD73_18735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76012.1"
                     /translation="ILAYNEFSEAGVQVQLRAVDPVAVREEVYRTIRPGVIADFGLAW
                     GRYQSLKSHVGPRRRAARSTSVQKLLPEVGRWIEPMPVLL"
     gene            333..1163
                     /locus_tag="VFD73_18740"
     CDS             333..1163
                     /locus_tag="VFD73_18740"
                     /inference="COORDINATES: protein motif:HMM:NF033580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZI76013.1"
                     /translation="MWTEAHRARHDARLKEIVSLDAVAQVARWLERADPPRSGRATPY
                     GAVVRAIAWHLRIGGPWRALPPGGPHWRTVYGWFRKWLEQGLFDRLLEDVARRRRRAM
                     GRRAAPRLSIIDTQAVKCIPVRGPRGYDTAKKVLGRKRVALVDADGTWLAVAVVPASV
                     QDRDTLEALDASKAAWPSLREAILDGAFTAAHCQEWSNRHGMRHRVVARDPAQKGFVV
                     LAGRWVVERSFGWLVHWGGLLRDRAGRLDVSAARMACAAALSGVEALLNPMPIQDAAS
                     "
     gene            complement(1226..1690)
                     /locus_tag="VFD73_18745"
     CDS             complement(1226..1690)
                     /locus_tag="VFD73_18745"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZI76014.1"
                     /translation="MAGAPGRGTLAKDKPPILGLIQRGGQVVLHMLAKVQQTTIKSII
                     KAAVAKDTLVHTDEYSVYARLEAWGYQHKTVCHGRGEYARDEDGDGFCEVHVNTIEGF
                     WSLLRSWLRPHRGISQDKLPDYLGFFQFVHNARRRGKALLGALVSALVAIPA"
     gene            complement(1630..2052)
                     /locus_tag="VFD73_18750"
     CDS             complement(1630..2052)
                     /locus_tag="VFD73_18750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76015.1"
                     /translation="MTTPSLVASGIGARRGKACGSRFDDLTGTVLAGHHRPLRVWVLC
                     LYFMGLNLSNRQIAMELGLNASDGQAMAEQLRHGLVAHTPAVQLEGEVEIDEVYVVAG
                     HKGQPAAVAKGGGSGAVASWQARRDAARWRRTSRRSLA"
BASE COUNT          454 a          880 c          916 g          510 t
ORIGIN      
        1 atactggcct acaatgagtt ttccgaagcc ggtgttcaag tccagcttcg ggccgttgat
       61 ccagtagcgg ttcgcgagga ggtttatcgt acaatccggc ccggtgtgat cgccgatttt
      121 ggattggctt ggggccgata ccagtcactc aagtctcatg tcgggccgag gagacgggcg
      181 gcccgcagca cgtcggtgca aaaattgctg ccagaggtcg gccgctggat cgagccaatg
      241 ccggttctcc tctaagagcc tgtttgagtg ggcctatgtg gctgatccct atctgatgcc
      301 ccagtgacca tggtggttga ctgaggggac agatgtggac cgaggcgcat cgggcgcgcc
      361 atgacgcgcg cctgaaagag atcgtgtcgc tggatgctgt tgcgcaggtg gcgcgctggt
      421 tggagcgggc ggatccgccg cgtagtgggc gggcgacgcc ctatggggcg gtcgtgcgtg
      481 cgattgcttg gcacctacgt atcggcggtc cttggcgggc gctgccgcca ggtgggccgc
      541 actggcgcac tgtgtatggt tggtttcgca aatggctgga gcaggggctg ttcgaccgct
      601 tgctggagga tgtggcccgc cgtcgccgcc gagcaatggg ccgccgggcg gcgccccgcc
      661 tgagcatcat cgacacgcaa gcggtcaagt gcatcccggt gcgcggtccc cgtgggtacg
      721 acaccgccaa gaaggtgctt gggcgcaagc gcgtggcctt ggttgacgcc gatggcacct
      781 ggctggccgt cgcggtcgtc cccgcctcgg tgcaggaccg cgacacgctg gaggcccttg
      841 atgcgagcaa agccgcgtgg cccagcctgc gggaggcgat cctggatggg gccttcaccg
      901 ctgcgcattg ccaggagtgg tcgaaccggc acgggatgcg ccaccgtgtc gtcgcgcgtg
      961 accctgctca aaaagggttt gtcgtcctcg cgggccgctg ggtggtggaa cgcagcttcg
     1021 gctggcttgt gcactggggt ggactgctgc gggaccgggc tggccgtctg gacgtctccg
     1081 ccgcgcgcat ggcgtgcgcc gccgccctgt ccggcgtcga ggctctcctc aacccgatgc
     1141 caatccaaga cgccgcaagt taaacccact caaacaggct ctaacaggcc ctaatcagaa
     1201 aaggctctta atgggctgcg gggtgttagg ccgggatcgc aaccagggct gagacgaggg
     1261 caccgagcag agccttcccg cgtcggcgag cgttgtgcac gaactggaag aaaccaaggt
     1321 agtccggcag cttgtcctgc gagatgcccc ggtgcggacg cagccacgac cgcagcagcg
     1381 accagaagcc ctcaatcgtg ttgacgtgca cttcgcagaa gccgtcgcca tcctcatcgc
     1441 gggcgtattc gccgcgccca tggcagacgg tcttgtgctg gtagccccaa gcttccaggc
     1501 gagcgtagac gctgtactca tcggtgtgga cgagggtatc tttcgcgact gcggctttga
     1561 tgatcgactt gatcgtggtc tgctgcacct tggccagcat gtgcagaacc acctggcctc
     1621 cacgttggat caggccaagg atcggcggct tgtccttcgc cagcgtgccg cgtcccggcg
     1681 cgcctgccag cttgcgacgg cgcccgagcc gccccctttt gccactgctg caggctgacc
     1741 tttgtgtcca gcgacgacgt agacctcgtc gatctcgacc tcaccctcca gctgcacggc
     1801 cggggtgtgg gcaaccagac cgtggcgcag ctgctccgcc atggcctgcc cgtcggacgc
     1861 gttcagccct agctccatgg cgatctgccg gttcgagagg ttcaacccca tgaaatagag
     1921 gcacaacacc cacacgcgca gcggccggtg atgcccggcc agcacggtgc cggtgaggtc
     1981 gtcgaagcga gagccgcacg ccttgccacg ccttgcaccg ataccgctgg cgacaaggct
     2041 gggtgtcgtc acatccgtcc cggatcacgg cctcgctgtc gcagccgggg cagcgcacgc
     2101 cccgcggcca gcgccgctgg cgcacgaagg cgaagcactt ggcgtcgtcc agcaggccgg
     2161 ggaggttgat caactcggat gcggccataa tggtggaggc tcctcgtgcg agccggtcag
     2221 ctacgcccgc ttgtgctcgc gcaccagacc tcctccgccc tgatcaccag tcaccaccct
     2281 ggaacccatc aagagcctct ggagtttgcc ggcttttggg ggcctgtcgc aaagtttgaa
     2341 aatggccatt gaatgggccc gccgaggctg ccttccaccc cagccatacg agggcagccc
     2401 aggttgaaga ccgagccaaa tcgcctgttc ccggcttatt cgcaaacttt gcgacaggcc
     2461 cgctgacggt cactatgcag aacgcggcgg gattgcagtt caagcgtaag cgtggtctgg
     2521 gctgcccctt ccagcgccgg catgaggagt gatgttcggg gctggttgga agctccgacc
     2581 gatgtcgatc tcagagttga agcctatgtc ggcgcgagcc cggcgccttg agcccatatt
     2641 gcggacctcc tcctatgaag ttctgttgct agcaagccct cggggtcgcg cgttacccgt
     2701 atggccaccc ccgataggaa ggacccccta gacttggcgc gggccctacc ttgcacatcc
//
LOCUS       DASRPQ010001647         1068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2381243, whole genome shotgun sequence.
ACCESSION   DASRPQ010001647 DASRPQ010000000
VERSION     DASRPQ010001647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2381243"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1068)
                     /locus_tag="VFD73_18755"
     CDS             complement(<1..>1068)
                     /locus_tag="VFD73_18755"
                     /inference="COORDINATES: protein motif:HMM:NF019219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1549 domain-containing protein"
                     /protein_id="HZI76016.1"
                     /translation="LAAEKLKPSPEADRVTLLRRLHLDLTGLPPTVAEVDAFLADKSP
                     AAYERAVETLLASPHYGERWGRHWLDAARYADSDGYEKDMSREMWPYRDYVVSAFNRD
                     LPYDRFIIEQFAGDLLPGAGQDQRVATGYLRNSMVNMEGAIDPEQFRMEAMFDRMDAL
                     GKGVLGLTIQCAQCHNHKYDPVTQEDYYRMFALLNNDHEARPAVYAPDQQMKIADLRR
                     QMNELEEDLRHRWPDWEKRMAAWEDSVKDNQPEWIILRDLDYEGDRAQRYEFLPDGSL
                     LACGYAPTKMTQWWRTTNDLSGLTAFRIELLTDPSLPYGGPGRAFNGTCSLTEFFVEA
                     TDLNAPTNKTKAKWAGATADY"
BASE COUNT          175 a          368 c          321 g          204 t
ORIGIN      
        1 tgtaatccgc ggtcgccccg gcccatttcg ccttggtctt gttggtcggc gcgttcaggt
       61 cggtggcctc aacgaaaaac tcggtcaggg aacaggtgcc gttgaaggcc cggcccggcc
      121 cgccatacgg caggctggga tcggtcagca gctcgatgcg gaaggccgtc agcccgctga
      181 ggtcattcgt cgtccgccac cactgagtca tcttggtggg ggcatagcca caggccagga
      241 gggagccgtc cggcaggaac tcatagcgct gggcccggtc gccttcataa tccagatccc
      301 gcaggatgat ccattcgggc tggttgtcct tcacggaatc ctcccacgcg gccatgcgct
      361 tttcccagtc cggccagcga tgccgcaggt cctcctccag ctcgttcatc tgccggcgca
      421 gatccgcgat cttcatctgc tggtccggcg catacaccgc cgggcgcgcc tcgtggtcgt
      481 tgttcaggag ggcaaacatc cggtagtaat cctcctgggt gaccggatcg tatttgtgat
      541 tgtggcattg cgcgcattga atcgtcagcc cgagcacccc cttgccaagc gcgtccatgc
      601 ggtcaaacat cgcctccatc cggaactgct cgggatcgat cgccccctcc atgttgacca
      661 tcgagttgcg caaatacccc gtggccaccc tctgatcctg gccggctccc ggcaacagat
      721 cgcccgcaaa ctgctcgatg atgaaccggt catacggcag atcccggttg aacgcgctca
      781 ccacatagtc gcgatagggc cacatctcgc gcgacatgtc cttctcgtag ccatcgctgt
      841 ccgcgtagcg ggcggcgtcc agccaatgcc ggccccaacg ctcgccgtag tgcggcgatg
      901 ccagcagcgt ttccaccgcc cgctcgtagg cggccggcga cttgtccgcc aggaatgcgt
      961 ccacttccgc caccgtcggg ggcagcccgg tgagatccaa atgcagccgg cgcaagaggg
     1021 tgacgcggtc cgcctcgggg gatggcttca gcttctccgc ggccagct
//
LOCUS       DASRPQ010001648         1170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3957253, whole genome shotgun sequence.
ACCESSION   DASRPQ010001648 DASRPQ010000000
VERSION     DASRPQ010001648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3957253"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..344
                     /locus_tag="VFD73_18760"
     CDS             <1..344
                     /locus_tag="VFD73_18760"
                     /inference="COORDINATES: protein motif:HMM:NF024969.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HZI76017.1"
                     /translation="ALTTDGSTLTAASNDLSFEQVFARQVEALCRPDDLLVLHSSSGQ
                     SPNLLTAARTARRCGVPTVGFLGKGGGTLAQLVDEAVIVPSDSTGLVQLIHMALEHLI
                     VELVERELCGA"
     gene            341..1093
                     /locus_tag="VFD73_18765"
     CDS             341..1093
                     /locus_tag="VFD73_18765"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HZI76018.1"
                     /translation="MIDLAGQVALVTGGSRGIGRAAALLLARAGADVALTFHTRADQA
                     ESVAREVQAVGRRTYVGGGDLGDPEVVDRLVAGIRREFGRLDMLVANAGIWPAEERRL
                     PDISVARWRTTLTANLDSVFLTIRAALPTMSSGGRIVIVSSTAGQRGEAFHSDYAATK
                     GALIALTKSLAIECAPDILVNCIAPGWVDTEMSAPAFSPENRERIRQSIPLQRIPTAD
                     DIAGPILFLCSDLARHLTGEVLNVNGGSVLCG"
BASE COUNT          196 a          358 c          387 g          229 t
ORIGIN      
        1 tcgcactcac cacagacggc tccactctta cggccgcgtc caacgatctc tcgttcgagc
       61 aggtctttgc ccggcaggtg gaagcactct gtcgacccga tgatctcctc gttcttcaca
      121 gcagcagcgg acaaagtccc aacttgttga cggccgccag gactgcccgc cggtgcggag
      181 tgcccaccgt cgggtttctc gggaagggcg gaggcactct agcgcagctg gttgacgaag
      241 cggtaatcgt cccctccgac agcactggtc tggttcagct gatccacatg gcgctcgagc
      301 atctcatcgt cgagctggtc gaacgtgagc tctgcggcgc atgatcgatc tggcaggtca
      361 ggttgcgctg gtcacggggg gaagtcgagg gattgggcgc gcagccgccc tgctgctggc
      421 tcgagctgga gccgatgttg ccctcacgtt tcacacccgg gcagatcagg cggagtcggt
      481 ggctcgcgag gttcaagccg ttgggcgccg gacctacgtt ggcgggggcg acctgggtga
      541 tcccgaggtg gtggaccgat tggtggccgg gatccggcgc gagttcggaa gactggatat
      601 gctggtggcc aacgccggca tctggccggc cgaagaacgc aggttgccgg atatctcggt
      661 cgcacgttgg cgcaccacct tgaccgcgaa tctcgactcc gtgtttctca cgatccgggc
      721 cgcgctgccg acgatgtctt ccggtggacg aatcgtcatt gtctccagca ccgcaggcca
      781 gcgcggtgag gcgtttcatt ccgattatgc cgccaccaag ggagccctga tcgccttgac
      841 caaatcactc gcgatcgagt gcgctcccga catactggtg aattgcatcg cgccgggctg
      901 ggtggatacg gagatgagcg ctccggcatt ttcgccggag aaccgggagc gcattcgcca
      961 gtcgattccg ctccaacgca tccccaccgc ggacgatatc gccgggccga ttctctttct
     1021 ctgcagcgac ctcgcgcgac acttgactgg tgaggtgctg aacgtgaatg gcggcagtgt
     1081 gctgtgcggg tagagcggga acagaaacag cgtgagcggt tagcggtgag cggggggcgg
     1141 cccgcttacc gcttactgct taccgcttac
//
LOCUS       DASRPQ010001649         2908 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_203133, whole genome shotgun sequence.
ACCESSION   DASRPQ010001649 DASRPQ010000000
VERSION     DASRPQ010001649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2908
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203133"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..401
                     /locus_tag="VFD73_18770"
     CDS             <1..401
                     /locus_tag="VFD73_18770"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI76019.1"
                     /translation="EPSTAGLPGPVAAQLANRHAELADNYALAGALDRAIEQYERALE
                     LGPEFHDLRYRMARVLLDAGRSLEAREALERVVEARPTFVDAEAALGLAHYMSGDAAG
                     ARNVWESCLARRPENTRVEAYLSMLARAEA"
     gene            398..1306
                     /locus_tag="VFD73_18775"
     CDS             398..1306
                     /locus_tag="VFD73_18775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76020.1"
                     /translation="MNRTYYTIAVLVFTAGCGQAGDHERRGDQAYVSAQYVEALNEYR
                     AALAKDPDARIYAKSGAAALHTGALEVASDAYLRLAAEDPTRAAEAAEGLEAVARAAE
                     RASDHKQLESAVIGLGMIAPNRSIGRYALAVLRQPRADANDLVAVIPAAIAVAPDAET
                     VDSLLWVYASALRETSGCDQALPLFQAAARRTRNQLLRSRAEDGVAACSLAVGLRAQA
                     AGKNEDAALWFAAAIRIDSNTAAGRRALVGYGDARLKEADTLAAAQAFQAVASDQVQS
                     DSTTQMARDRLEELRARTDLPRTILR"
     gene            1303..2082
                     /gene="bamD"
                     /locus_tag="VFD73_18780"
     CDS             1303..2082
                     /gene="bamD"
                     /locus_tag="VFD73_18780"
                     /inference="COORDINATES: protein motif:HMM:TIGR03302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0065003 - protein-containing complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HZI76021.1"
                     /translation="MTRLLVCCTVALLMACAGRRGPQTRAAPAPVSDAGASAATIDSL
                     WKHAESAFRHGKWGDAEKLLGRAVLEFSPGDPRIPRAHFYIAESMFAQGRQLEAAREF
                     RKTSDETPNDPLAPEALLRLGDVYADLWRRPELDPTYGQTALSTYQELLNRYGGTDAA
                     KRAQLRINELNERFAYKAYKAGLFYFRLKAYDSAILYLKDLVATYPKTTVVPDALVKL
                     VQAYKALGYREDVQETCGYIQRFHPSAPRVREVCPAKPAGA"
     gene            2090..2665
                     /gene="nadD"
                     /locus_tag="VFD73_18785"
     CDS             2090..2665
                     /gene="nadD"
                     /locus_tag="VFD73_18785"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR00482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HZI76022.1"
                     /translation="MIGLFGGSFDPVHHGHLIVGQVAREVLGLDVLRFLPAREQPFKQ
                     GRHHGSPADRAAMLELAVAGAPGFEVERLELERPGPSYSVDTLRELRRRQPETEFVLL
                     LGADAAKDLPEWREAQRIPELARVAVFARPGSTIPRSAGISQVIEVPSIDISATEVRR
                     RVSRGQPIRYWVPEAVAEYISRHRLYLDQND"
     gene            2658..>2908
                     /locus_tag="VFD73_18790"
     CDS             2658..>2908
                     /locus_tag="VFD73_18790"
                     /inference="COORDINATES: protein motif:HMM:NF019156.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76023.1"
                     /translation="MIKTLMTAVFGSRFDRERKRIQPIVDQIHEHEERLKDLSEAELK
                     EQTARFRERLAARTGPLKLELEEVRQAKHACADPVERDQL"
BASE COUNT          502 a          935 c          966 g          505 t
ORIGIN      
        1 tcgagccgtc aaccgctgga ctccctggac cggttgccgc ccaattggcc aaccggcacg
       61 cggagctggc cgacaactat gccttggccg gggcattgga tcgggcgatc gaacagtacg
      121 agcgcgccct cgaactcggt ccggagtttc acgatctccg ctaccggatg gctcgcgtcc
      181 ttctcgatgc gggtcgctcg ttggaggcgc gggaggcact cgaacgagta gtcgaggccc
      241 gtcccacctt cgtggatgcg gaggccgctc tggggttggc gcattatatg tcgggagatg
      301 ccgctggggc ccggaacgtc tgggaatcct gtctcgcgcg gcgtccagag aacactcggg
      361 tcgaggccta tctttccatg ttggcgcgag ccgaggcgtg aaccgaacgt attacaccat
      421 cgcagtcctg gtcttcactg ccggctgtgg gcaggctggt gaccatgagc gccgaggaga
      481 ccaggcctat gtcagcgctc agtacgtcga ggcgctgaac gagtatcgtg ctgccctggc
      541 caaagacccc gatgctcgga tctatgccaa gagcggcgcc gcggccctgc acaccggggc
      601 gctggaggtc gcgtcagacg cgtatctccg gctggcggcc gaggatccga ctcgggctgc
      661 ggaagccgct gaaggccttg aggcagtcgc ccgggcagcc gagcgcgcgt ccgatcacaa
      721 gcagttggag agcgccgtga ttggtctcgg aatgatcgcc cccaaccgat cgatcggccg
      781 atacgcgctg gcagtgctcc gccaaccccg agccgacgct aatgacctcg tggccgtcat
      841 ccctgccgcc atcgcagtag cgccggatgc ggagacggtg gattcgctcc tctgggtcta
      901 cgccagtgcc ctccgggaaa cctcggggtg cgatcaggcg cttccgctgt ttcaggccgc
      961 cgcgcggcgc accaggaacc agctgcttcg cagccgcgcc gaggatggtg tggccgcgtg
     1021 ctcattggca gtcggattgc gagcgcaggc cgccggcaag aacgaagatg ccgccctctg
     1081 gtttgccgcc gccatccgaa tcgattccaa cacggctgcg ggacgccgtg ccctggtcgg
     1141 ctacggcgat gctcggctca aggaagcaga cactctggcc gccgcgcagg cgtttcaggc
     1201 ggtggcatct gatcaggtcc agagcgactc caccacgcag atggcgcggg accggctgga
     1261 ggaactgcga gcccgcaccg atctgcctcg gacgatcttg cgatgacacg tttgctggta
     1321 tgctgcaccg tggcgctact gatggcgtgt gccggccgcc gtgggccgca aactcgggcg
     1381 gcacccgctc cggtatcgga tgcaggcgca agcgccgcaa cgatcgattc gctctggaag
     1441 cacgcggaaa gcgcatttcg ccatggcaag tggggtgatg cggagaagct cttggggcga
     1501 gccgtgctcg agttctctcc gggggacccg cgaattcccc gggcgcattt ctacatcgct
     1561 gagtcaatgt tcgcgcaggg aaggcagctc gaggcggcgc gcgaattcag gaagacctcc
     1621 gacgaaactc ccaacgatcc tctggccccc gaggcgttgc tccggctcgg cgacgtctat
     1681 gccgacctct ggcgccgtcc cgagctcgac cccacctacg gtcaaacggc gctctctacc
     1741 tatcaggagc tcctcaatcg gtacggtggg accgatgccg ccaagcgagc acagctccgg
     1801 atcaatgaac tgaacgaacg ctttgcctac aaggcgtaca aggcgggcct cttctacttt
     1861 cggctcaagg catacgattc ggccatcctc tacctgaagg atctggtcgc gacgtacccg
     1921 aaaaccaccg tcgttcccga tgcgctggtc aagctggtgc aggcctacaa ggcgctcggg
     1981 taccgcgagg acgtgcagga gacctgtggc tacatccagc gcttccaccc gagcgctcct
     2041 cgggtccgcg aggtctgtcc cgccaaacct gcgggcgcat gacgcgcgca tgatcggttt
     2101 attcgggggc tccttcgacc cggttcatca cggacatctg atcgttgggc aagtggcacg
     2161 ggaagttctg gggctcgatg tgctccgttt tcttcccgcg cgggagcagc cgttcaaaca
     2221 gggtcgccac cacggctctc cggctgatcg tgccgctatg ctggagttgg cggtggcggg
     2281 ggcacccggg ttcgaggtgg aacggctcga gctcgaacgg ccgggaccgt cctatagtgt
     2341 cgacaccctg cgagagctgc ggcgccgcca gcccgagacg gaattcgttc tcctgctcgg
     2401 cgccgacgcc gccaaggacc tgccggagtg gcgcgaggcc cagcggattc ccgagctggc
     2461 ccgggtggcg gtctttgccc ggccgggctc aacgatcccc cgttctgcag ggatttccca
     2521 ggtgatcgag gtgccatcca tcgacatttc tgccaccgag gtgcggcgca gagtcagccg
     2581 cgggcagccg atccgctact gggtaccgga ggcggtggcg gagtatatct cacggcaccg
     2641 gttatatttg gaccagaatg attaagacac tgatgacggc ggtcttcggc tcgcgcttcg
     2701 atcgggagcg caagcgaatc cagcctattg tggatcagat ccacgagcac gaagagcgac
     2761 tcaaagacct gagtgaggcg gagctgaagg agcagaccgc ccgattccgg gagcgcctgg
     2821 cggctcggac cggcccgctc aagctggagt tggaagaagt gcgccaggcc aagcacgcct
     2881 gcgccgatcc agtcgagcgc gatcagct
//
LOCUS       DASRPQ010001650         1697 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3362338, whole genome shotgun sequence.
ACCESSION   DASRPQ010001650 DASRPQ010000000
VERSION     DASRPQ010001650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1697)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1697)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1697
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3362338"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1647)
                     /locus_tag="VFD73_18795"
     CDS             complement(<1..1647)
                     /locus_tag="VFD73_18795"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HZI76024.1"
                     /translation="MGLLAAWAAPAVAQDAPSLVGPRTQVKSIEFRFKGKHTLSEPAL
                     QKQIALTPEGSMVGLRRFFGFLPFVPPVGNHPFDPLELQRDVVRLRSYYQHSGFPKAQ
                     ISYDVRYNAKSDLVRLTYVIDEGPPLLVQSLRFEGDSGSDPKLAPGLNPSWSRFVGKE
                     ERNAKRMGKDEQRSLADSTTRWLRNRGYPFASTDVRVIADTVRSRADVTVMVHPRERA
                     RIREIAVSGNEGVPARHIVRQLPVERGDWYNLDQLERGRQQLVQLDLIRLALFDVPRD
                     SLRDSTVLVHLDVTENRPRLVRGEAGLASGGGISGQVDWTHRSFMGGLRTFTVTASAQ
                     TGALSFETPAQQLYRLSATLFQPYVGDRRLSLAVGPFVEYRNDLRDRSRALGFETTLA
                     YAAGPLRSISLGYSISHRRILDYGFGANLDPIQYLPLLRLADSNAAGQLGSVRNRSAI
                     TLQGSYGRLDQFANPRRGFVLRPRIEITPPFGFNTAEYLLLDLGGTAFVPLTSRVGFT
                     VRVGAGRIYPFGTSLTNVGLESPFVSLLRLGDVPFTAGGTR"
BASE COUNT          305 a          572 c          551 g          269 t
ORIGIN      
        1 acgggttccg cccgcggtga acggcacatc tcccagccgg agcagggaga cgaatggcga
       61 ctccagcccc acattggtca ggctggttcc aaaaggatag atccggccgg cgccgactcg
      121 gacagtaaac ccgacccgag aggtgagcgg cacgaacgcc gtgcctccca ggtccagcag
      181 cagatactcc gccgtgttga agccgaacgg cggcgtgatc tcgattcggg gacgcagcac
      241 gaagccccgc cgaggattgg caaactggtc cagcctgcca tagctcccct gcagcgtgat
      301 ggcgcttcgg tttctcacgc tcccgagctg gcccgctgcg ttggaatcgg ccaacctgag
      361 cagcggcaag tactggatcg ggtcgagatt cgcgccgaaa ccgtagtcca agatccggcg
      421 atgggagatg gagtatccca gcgaaatcga ccggaggggg ccggcggcat aggcgagcgt
      481 ggtctcgaac cccaacgcgc gcgagcggtc gcgcagatcg ttgcgatact cgacgaacgg
      541 ccccaccgcg agcgagaggc ggcggtctcc cacatacggt tggaataacg tcgccgataa
      601 tcggtagagc tgctgcgccg gggtctcgaa cgagagcgct cccgtctgcg ccgatgccgt
      661 caccgtaaag gtgcggagcc cgcccatgaa gctccggtgg gtccagtcca cctggcccga
      721 gatcccgcca cccgaggcga gacccgcctc accccggacc agccgaggcc ggttctcggt
      781 gacgtcgagg tggaccagga cggtggaatc tctgaggctg tcccgcggca catcgaacag
      841 cgccagccgg atcaggtcga gctgcaccag ctgctgccgc ccccgttcca gctggtccag
      901 gttgtaccag tcgccccgct cgaccggaag ctgccggacg atgtgccgcg ccggcacacc
      961 ttcattcccg ctgaccgcga tctcccggat gcgggctcgc tctcgcggat gcaccatcac
     1021 ggtaacgtcg gcacgactgc ggacggtgtc ggcaatgacc cggacgtcgg tggatgcgaa
     1081 cggatagccg cgattcctga gccagcgggt ggtgctgtcg gccagcgacc gctgctcatc
     1141 tttccccatt ctcttcgcgt tccgctcctc cttgcccacg aatcggctcc agctcgggtt
     1201 cagaccgggc gcgagcttgg ggtcgctacc gctgtcaccc tcgaagcgaa gcgactggac
     1261 cagcaacggc ggtccctcgt cgatcacata cgtcagccgc accagatccg atttggcgtt
     1321 gtagcggacg tcgtagctga tctgggcctt ggggaagccg gagtgctggt aatagctccg
     1381 gagccgcacc acatcgcgct gcagctcgag cggatcgaac ggatggttgc ccaccggcgg
     1441 cacgaacggc aggaagccga agaaccggcg gagtcccacc atgctgccct ccggcgtgag
     1501 ggcgatctgt ttctgcagcg ccggttccga gagcgtgtgc tttcccttga agcggaactc
     1561 gatcgacttc acctgcgtgc ggggcccaac caggctgggg gcatcctgcg ccaccgccgg
     1621 tgctgcccag gcggcaagca gtcccacggt gacgagccgc cactcaatac gcgtagcgac
     1681 tcctcagcgt gaatcgg
//
LOCUS       DASRPQ010001651         1642 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1787129, whole genome shotgun sequence.
ACCESSION   DASRPQ010001651 DASRPQ010000000
VERSION     DASRPQ010001651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1642
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1787129"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(155..996)
                     /locus_tag="VFD73_18800"
     CDS             complement(join(155..618,618..996))
                     /locus_tag="VFD73_18800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612205.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZI76025.1"
                     /translation="MWTNENRARYDRSKLRYPSDLTDEEWARVAPLIPPPKPGGNKRT
                     RDMREVVNGLMYVLSTGCQWRAIPKDLPPRSTVYGYFDLWDHDGTVQRRHHALFVQCR
                     EQAGREASPTAAIIDSQSVKGAEKGGPSIDPSGYDAGKKVRGKKRHVLVDTQGLLMHA
                     LVQAADVQDRDGGVVVMATLFGLYPFLLKLYADGGYQGPQFQQGLRRVCRRIRVEIVK
                     RSDQAKGFVVLPKRWIVERTIAWLNRCRRLAKDWECLSRKALAFLHWASIRLMLRKLS
                     HSTK"
     gene            complement(1179..1472)
                     /locus_tag="VFD73_18805"
     CDS             complement(1179..1472)
                     /locus_tag="VFD73_18805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76026.1"
                     /translation="MSYEVMAYEKARLDYAEAETALEALTASVKAAATALELDPFSVD
                     ASTWPSSEQIASVLARVRSARQELRETWAAVPGAMRSNVEPPPEGVIRDDQAR"
BASE COUNT          277 a          563 c          505 g          297 t
ORIGIN      
        1 caccggcgtg tagagcggca tgaccccatg ttcgcacagc cacagcacca gctcgggcgt
       61 cttgtggccg gtgaggttgt cccacaccag caacagccgc agcggtggca ggtcggctgg
      121 gagggtgaag ggcctcgtca gtgtctgtcc gggatcattt tgttgagtga gagagctttc
      181 ggagcatcag gcgaatggaa gcccagtgca ggaaggcgag cgccttgcgg ctgaggcact
      241 cccagtcctt ggccagccga cggcagcggt tcagccatgc gatggtgcgt tcgacaatcc
      301 agcgcttcgg caagacgacg aagcccttgg cctgatcgga ccgcttgacg atctccacac
      361 ggatgcggcg gcagacgcgt cgcaaaccct gctggaactg cgggccctga tagccgccgt
      421 cggcgtaaag cttgagcaga aacgggtaca gcccgaagag ggtggccatg accaccacgc
      481 ccccgtcacg gtcctgcaca tcggctgcct gcacgagggc gtgcatcagc aagccttgtg
      541 tgtcgaccag gacatggcgt ttcttccccc tgactttctt gcccgcgtcg tagcccgacg
      601 ggtcgatgga gggcccccct tttccgcgcc cttgacgctc tggctatcga tgatggccgc
      661 cgtcggacta gcctcgcgcc cggcctgctc acgacactgg acgaagagcg catgatgacg
      721 gcgctgcacc gttccgtcgt gatcccatag atcgaaatag ccgtagactg tgctgcgcgg
      781 gggcaggtcc ttcgggatcg cccgccattg gcatcccgtg ctgagcacgt acatcaggcc
      841 gttgacgacc tcgcgcatgt cgcgcgtgcg cttgttgccg cccggcttcg ggggcgggat
      901 caggggagcc acccgcgccc actcctcatc ggtcaagtca ctggggtagc gaagcttgct
      961 gcgatcgtaa cgcgcgcggt tctcgttggt ccacatcggc agccccccat ctccggcccc
     1021 gcatggaagc ataagccgct cagatcattc aacgtgttcc cagacagaca ctgagcaccc
     1081 cacgctcaga taccctcttc cgctcgaagc agacgatgaa agcggtcatt gcatccccgt
     1141 acgctcggtc gacccccatc catcgtccag cgccgccctt atcgcgcctg gtcgtcgcgg
     1201 atcacgccct ccggaggcgg ctcaacgttc gatcgcattg cccccgggac cgccgcccag
     1261 gtctcgcgaa gctcctgtcg cgcactgcgg accctcgcca gcaccgacgc gatctgctcg
     1321 gatgatggcc atgtgctcgc atcgacgctg aagggatcaa gctccaaggc ggtggcggcg
     1381 gctttcacgc tcgcggtgag cgcctcgagc gcggtctccg cctcggcgta gtcgagccga
     1441 gccttttcat atgccatcac ttcgtagctc attcagccct ccgtcagacg ccaccggctg
     1501 ccgaacattt ccagccgcca ctcggtccag tcaccctctc atgagcggca ggcaggggtg
     1561 cttgcgcgtg ggtcgcgcta gcggttgcaa ctcgcatggc tgctctctgc aggcgcacac
     1621 gccgaaagcc gacgatccgc gg
//
LOCUS       DASRPQ010001652         1334 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1787148, whole genome shotgun sequence.
ACCESSION   DASRPQ010001652 DASRPQ010000000
VERSION     DASRPQ010001652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1334
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1787148"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VFD73_18810"
     CDS             <1..201
                     /locus_tag="VFD73_18810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76027.1"
                     /translation="WLIEVPHCALAPHDAALAHEMPGWGTRFKPLVELWQVAGPTEHS
                     RSNLMSNIGFAHELRRGDGHVG"
     gene            285..358
                     /locus_tag="VFD73_18815"
     tRNA            285..358
                     /locus_tag="VFD73_18815"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:319..321,aa:Pro,seq:ggg)
     gene            412..855
                     /locus_tag="VFD73_18820"
     CDS             412..855
                     /locus_tag="VFD73_18820"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HZI76028.1"
                     /translation="MLILAGMVGCGGKPDRPAGAAKAGFSPALGVDTAAMTKTPSGLR
                     YQDLTKGDGAEATAGKSVQVHYTGWLPNGEKFDSSRDRNEPFSFTLGAGQVIAGWDEG
                     VAGMKVGGRRKLVIPPDLAYGTAGAPPDIPPGATLVFDIELLAVR"
     gene            complement(858..>1334)
                     /locus_tag="VFD73_18825"
     CDS             complement(858..>1334)
                     /locus_tag="VFD73_18825"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HZI76029.1"
                     /translation="LQLGSYSTSIGTHVSPDGSVDYSASSSTFLYMGPLGGAQPEQIG
                     HSMSRYVVRGTVRDETGAPVEGAAVQLNEDVVYTNSAGNFLLRAKHPEVYRLSVLTGE
                     FLLPGQWLVVKAPAQITAMEETSSALVEIVLRRGTTDASGPEQPAPENPPPETPAP"
BASE COUNT          243 a          409 c          426 g          256 t
ORIGIN      
        1 tggctcatag aggtccctca ctgcgccttg gcgccgcacg atgcggcact cgctcacgaa
       61 atgccgggct ggggcacccg gtttaagccc cttgtggaac tatggcaagt cgcgggcccg
      121 accgagcatt cgcgctccaa cctcatgagc aatattggct ttgcccacga gctccggcgt
      181 ggtgacggtc acgtcggatg actatctggg ctcaccggta accagcacgc ggcacccttc
      241 cctcgggtga acgccgggac tacaattccg ctccttcgga gtctcgggac gtggcgcagt
      301 ccggtagcgc actgcaatgg ggttgcaggg gtcgcgggtt caaatcccgc cgtcccgact
      361 gagatccaac acatcacaag gccaacacac ctgaaacgct tactcgcggg tttgctaatt
      421 ctggcgggaa tggtcggttg tggcggtaag cccgatcggc cggccggcgc cgcaaaggca
      481 ggattcagtc ccgcgctcgg tgtcgatacc gcggccatga cgaagacccc ctccggcctg
      541 cgataccaag atctgaccaa gggcgatggt gccgaagcca ctgcgggaaa gtccgtccag
      601 gtgcactaca ccggctggtt gcccaatggg gaaaaattcg acagcagtcg agaccggaac
      661 gagcccttta gtttcacctt gggcgcgggc caggtgattg cagggtggga tgagggcgtg
      721 gccgggatga aggtaggagg tcgccgcaag ctggtcattc caccggacct ggcatatgga
      781 acggcaggtg cgcctcctga cattccgcca ggcgcgacct tggtctttga tatcgagctg
      841 ctggctgtcc gctgaactca gggggccggg gtttcaggag gaggattttc cggcgcgggt
      901 tgttcagggc ctgacgcgtc cgtggtgccc cgtctgagca cgatctccac cagtgcgctg
      961 ctcgtttctt ccatcgccgt gatttgagcc ggcgctttta ctaccagcca ttgaccgggc
     1021 agcagaaatt ctccggtcag cacgcttaac cgatagacct cagggtgctt cgctcgcagc
     1081 aagaagtttc ccgccgaatt ggtgtacacc acatcttcat tgagctgtac ggccgctccc
     1141 tcgaccggag cgccggtttc gtcccggaca gtaccgcgga cgacgtagcg ggacattgag
     1201 tggccgatct gctcgggctg cgccccgccg agcggcccca tgtacaagaa ggtgctgctc
     1261 gacgccgagt aatccacaga accgtccggg ctgacgtggg tcccgatgct ggtggaatag
     1321 ctgccgagct ggag
//
LOCUS       DASRPQ010001653         3739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3362645, whole genome shotgun sequence.
ACCESSION   DASRPQ010001653 DASRPQ010000000
VERSION     DASRPQ010001653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3739
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3362645"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..842
                     /locus_tag="VFD73_18830"
     CDS             <1..842
                     /locus_tag="VFD73_18830"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HZI76030.1"
                     /translation="RERTRYPGPPAGFALPGDLVHPMTLDTAVIPCGGLGTRLHPITR
                     WLPKEVLPVGLKPVLYWTLDEAAAAGLLRAIIITNPHKPMLETVARNYPGPLELEFVP
                     QDHPRGLGDAFLRAQDQLAGSPFLAVLPDNLFHGANPSAAVLETYRSTGLATVLLAAI
                     EKKDAGSKGATGRAMVRHDATGFLRVTSVADKGSGRFDTAGAEAAVTPIGRMAFGGEI
                     LREFQELGRELPPDKELDDVPVLQRLAQRDALAGVMNPGKFFDVGVPEGYREAVASSP
                     ARA"
     gene            856..1161
                     /locus_tag="VFD73_18835"
     CDS             856..1161
                     /locus_tag="VFD73_18835"
                     /EC_number="4.1.1.50"
                     /inference="COORDINATES: protein motif:HMM:NF014705.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004014 - adenosylmethionine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine decarboxylase"
                     /protein_id="HZI76031.1"
                     /translation="MNATFNHYLLEFTDLNPERLRDTDGLSALVVAAAGAVGMPGLGP
                     PVAREGAGDIAVALLCLEGHIVLHCAPAEGICLVDIVARAPADVGKGIDVISRRLSS"
     gene            complement(1139..>3739)
                     /locus_tag="VFD73_18840"
     CDS             complement(1139..>3739)
                     /locus_tag="VFD73_18840"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HZI76032.1"
                     /translation="VVREVLPNGLTLLIQPDHSASVVALVTHVKAGFFDEPDRWTGIS
                     HVLEHMFFKGTRRRGVGAIARETKAVGGYLNAGTGYDHTSYFTVLPASGLAQALDIQS
                     DALRNSIIDPEELARELQVIIQEAKRKRDTPGAVAQETLHEVMFDRHRIRRWRIGQES
                     ELARLTRDDLMGYYRSRYVPERTVVAIVGAIDPAAALDLAVKHYADWPATAAEIDSSP
                     EEPPHHEIRARTLRGDVSQSELVVGWRTVPALHEDAPALDLAAGVLGAGRGSLLYQAL
                     RESGLVTSISAHNYTPTELGVFSIDAELEPEKLEPALGRIAECVSRLALLGPGPDELH
                     RARTLLEARWARRLESMEGKASALAAAEALEHVSFLDREYAALLSVDADDVREAAAEY
                     LQPDGVAGVVYSADGAGPDLTPELLGRSFAVTPLHELPRLQLERRRVPPVLRMPASRE
                     ANVEQTRLDGIDLLVRRKPGVPLVTLGLYLPRIEFDPAGQAGLGALLARAAVRGAGDM
                     DAAELAFAFEQLGGSLAAVAAADWLGFSTSVLAPRMVDAAVLLDTVLRSPRLRDAEVE
                     TERGLMAAEAEQISDDMFRFPFQLGFGEAFGDAGYGLPVSGLPETLQSITPANVRAWH
                     ERVLGRGRPVLIAVGDVDSTQASAALAGIFRDYPRAADGSVTDQPGYKIRENGSSRVV
                     EREKAQTALAMIFPGPDRRSPERFAGEVWAAVASGLGGRMFEALRDRRSLAYTVLASS
                     WQRGRAGALVTYIATSPEREEEARTAMLEQLEQFAREPITEQERSQAVNYLAGQAEIS
                     RQSASALASEILESWVIGNGLMDLEDPAGSYRAVTAEEVLQVARQNLDPVRRAEGVVR
                     GSGLRTRVGG"
BASE COUNT          660 a         1251 c         1176 g          652 t
ORIGIN      
        1 atcgtgagcg tacaagatac cctggcccgc ccgccggctt cgcccttcct ggtgacctcg
       61 tccatcccat gaccctcgac acggcagtga ttccgtgcgg tgggctgggt acgcggttgc
      121 accccattac acgctggttg cccaaggaag ttcttcccgt cggactcaaa ccggtgttgt
      181 actggacgtt ggatgaggcc gcggcagctg gactcctccg cgccatcatc atcaccaacc
      241 cgcacaagcc gatgctggag accgtcgccc ggaattaccc cgggccgctg gagctggagt
      301 tcgtgcccca ggaccatccc aggggtttgg gcgatgcctt tctccgggcg caggaccagt
      361 tagcaggatc gccgttcctg gcggtgcttc cagacaacct cttccacggg gccaatccat
      421 cagccgccgt gctggagacc tatcgttcta ccggattggc cacggtcctg ctcgccgcga
      481 tcgagaaaaa ggacgccgga tcgaagggcg caactggccg ggcgatggta cgtcacgatg
      541 ccaccgggtt ccttcgggtc acctcggttg ccgacaaggg aagcggccgt ttcgacaccg
      601 cgggagcgga agcggccgtc acaccgattg gcaggatggc gttcgggggc gagatcctcc
      661 gggaattcca ggagcttggc agggagcttc cgccggacaa ggagttggac gatgtgccgg
      721 tccttcagcg gctggcccaa cgagacgcac tcgccggggt catgaacccg ggaaaatttt
      781 ttgatgtcgg tgtgccggaa ggatatcgcg aggcggttgc cagctctcct gcgcgagcgt
      841 agtggagagg ccgtcgtgaa cgccaccttc aatcactatc tgctcgaatt caccgatctc
      901 aatccggagc gcctccggga caccgacgga ctatcggcgc tcgtcgtggc ggccgcgggg
      961 gcggtgggaa tgccggggct cgggccgccg gttgcgcggg agggcgccgg cgacatcgcc
     1021 gtagcgctcc tctgcctgga gggtcacatc gtccttcatt gcgcgccggc agagggaatc
     1081 tgcctggtcg acatcgtggc ccgtgccccg gccgacgtgg gaaagggtat cgacgtgatc
     1141 agccgccgac tctcgtcctg agtccgctcc ctcgaacgac cccctctgct ctgcggaccg
     1201 gatctaggtt ctggcgagcc acttggagta cctcctccgc tgttaccgcc cggtaggacc
     1261 cggccggatc ttccaaatcc atcaagccgt tcccaatcac ccaggattcg aggatctccg
     1321 aagctagagc gcttgcgctt tgtcgggaaa tttctgcctg gcccgccagg taattcactg
     1381 cctgggagcg ttcctgctcg gtgatgggct cccgggcaaa ttgctccagc tgctccagca
     1441 tcgccgtgcg ggcttcttct tcccgctcgg gagaggttgc gatataggtc accagagcgc
     1501 cggcacggcc ccgctgccaa ctcgatgcca gcacggtgta ggcgagcgag cgtcggtcac
     1561 gcagagcctc gaacattcgg ccgccgagtc cactggcaac tgcggcccac acttcgccgg
     1621 caaagcgttc gggacttcgc cggtccgggc ccggaaagat cattgccagc gcagtctggg
     1681 ccttctcccg ttcaacgact cgggaggaac cattctcccg gatcttgtac cctggttgat
     1741 cggtcacgct cccgtctgcg gcccggggat agtctcggaa gatgccggcc agcgccgcgc
     1801 tcgcctgagt cgaatccacg tcgccgacgg caatcaagac cggccgaccc cggccaagca
     1861 ctcgctcatg ccaggcccgg acattcgcgg gggttatcga ctgcagcgtc tcgggaaggc
     1921 cgctgacggg taagccgtac ccggcatctc caaacgcttc gccgaacccg agctggaagg
     1981 gaaagcggaa catgtcatcg gagatttgct ccgcctcagc cgccatgaga ccacgttcgg
     2041 tctccacctc ggcatctcgc aggcgcgggg accgcaatac cgtatccaac aggacggcgg
     2101 cgtcgaccat gcggggagcg agcacactgg tactgaagcc gagccagtcg gcagccgcca
     2161 cagcggccag acttcctccc agctgttcga aagcgaacgc cagctcggcc gcgtccatgt
     2221 caccggcccc tcgaaccgct gcgcgcgcga gtaacgcacc gagccccgcc tgaccggcag
     2281 gatcaaattc gatccgaggc aggtacaggc cgagcgtcac cagtggcaca cccggcttac
     2341 gccggaccag gaggtcgata ccgtccaggc gggtctgctc gacattcgct tcgcgggatg
     2401 caggcatcct caggacaggc ggcaccctgc gacgctccag ttgcagtcga ggaagctcat
     2461 gcaacggagt gacggcaaag ctccgcccca acagctctgg agtgaggtcg ggtcctgccc
     2521 catcggcgga atagaccact cctgcaaccc catccggctg gagatactcc gcagcggctt
     2581 ctcggacatc atccgcatcc acgctcagaa gagcggcata ctctcgatcc aagaacgaca
     2641 catgctccag tgcctcagca gcggcgagcg ccgaggcctt gccttccatt gactcgagcc
     2701 gccgcgccca tcgcgcttct agcagagttc tcgcgcggtg aagctcgtca ggaccgggac
     2761 ccaacagggc gagccgtgag acgcactcgg cgatcctccc cagggctggc tccagctttt
     2821 caggctccag ttcggcgtcg atgctgaaga cgcccagttc ggtgggggtg tagttgtgcg
     2881 cggaaatcga ggtcaccaga cccgactccc tgagcgcctg gtacagcagg ctgcccctgc
     2941 ctgccccaag cacgccggcg gccagatcca gcgcgggcgc atcctcgtgc agtgcaggca
     3001 cagtccgcca gccgaccacc agctcggatt gactgacatc gccgcgcagg gtgcgggccc
     3061 ggatctcgtg gtggggcggt tcttccggag aggaatcgat ttcagctgct gtagcaggcc
     3121 aatcggcgta gtgcttcacc gccaaatcga gggctgccgc ggggtcgata gcgccgacga
     3181 tggcgacgac ggttctttcg ggcacgtagc gtgaccggta gtaccccatc aggtcatctc
     3241 gcgtcagccg ggcgagttcc gactcctggc cgatccgcca gcggcgaatc cggtgccggt
     3301 cgaacatcac ctcatgaagt gtctcctgcg ccactgcccc cggcgtatcg cgcttgcgct
     3361 tggcctcctg gatgatgacc tgcaactcgc gggcaagctc ctccggatcg atgatggagt
     3421 tacggagagc gtcggactga atgtcgagcg cttgagccag cccggacgcg ggaagcacgg
     3481 tgaagtaact ggtgtgatcg tacccggtcc cggcattcag atacccgccc accgccttgg
     3541 tctcccgcgc tatggcgccg acgccccttc gtctcgtccc cttgaagaac atgtgctcca
     3601 gtacatgcga gatgccggtc caccggtcgg gctcatcgaa gaagcccgcc tttacgtgag
     3661 tgaccagagc gactacggag gccgagtgat cgggctggat cagcagggtc aatccgttgg
     3721 ggaggacctc ccggacgac
//
LOCUS       DASRPQ010001654         1589 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2737513, whole genome shotgun sequence.
ACCESSION   DASRPQ010001654 DASRPQ010000000
VERSION     DASRPQ010001654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2737513"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..221
                     /locus_tag="VFD73_18845"
     CDS             <1..221
                     /locus_tag="VFD73_18845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76033.1"
                     /translation="DKIIYGSEAPIFHPQWALRAFMDFQIPEDLCQGYGYPQLTDQAK
                     RKILGENLLRLHGMDVQEARATLGRHRS"
     gene            complement(306..746)
                     /locus_tag="VFD73_18850"
     CDS             complement(306..746)
                     /locus_tag="VFD73_18850"
                     /inference="COORDINATES: protein motif:HMM:NF018663.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZI76034.1"
                     /translation="MSTQLNPYLSFRDNAREAMGFYQSVFGGELATSTFAEFHASEDP
                     AEQDKIMHSMLTTEGGLVLMASDTPNRMDYTPGNNFSISLSGAQTDEGELRGYWDKLS
                     AGGTVAMPLSPAPWGDIFGMCTDKFGVNWLVNITGAATQEPAGS"
     gene            1072..>1589
                     /locus_tag="VFD73_18855"
     CDS             1072..>1589
                     /locus_tag="VFD73_18855"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI76035.1"
                     /translation="MAPIHEQVLSDTDSRLVLRSRLGAITLLLLCAVQFLDIADSAIV
                     NVALPSIQHSLGFSQQNLQWVASGYILTYGGFLLLGGRLGDLLGRRRLLLTGLAVFAV
                     SSLAAGLANSAGLLVAARLAQGIGAALMAPAALSELTTSFREGKDRNTALGAWGAISG
                     LAAAAGVFLGGV"
BASE COUNT          257 a          539 c          512 g          281 t
ORIGIN      
        1 aagacaagat catctacggc tccgaggcgc ccatcttcca tccgcagtgg gcgctgcggg
       61 ccttcatgga cttccagatc cccgaagatc tctgccaagg ctatggctat ccacagctga
      121 ccgaccaggc caaacggaag atcctcgggg agaacctgct ccgcctgcat gggatggacg
      181 tccaggaagc acgagcaacg ctcggccggc accggtcctg accaggcagc gttagccggg
      241 ggccggcggc tgacccgcgg ctggcgctga cgacgcaggc gtcagcgcca gccttgcccc
      301 tcccgctagc tgccggccgg ttcttgtgtg gccgctccgg tgatgttgac cagccagttg
      361 acgccgaact tgtcggtaca catgccgaag atgtcacccc acggagcggg gctcagcggc
      421 atggcgacgg tgccgcccgc cgagagcttg tcccagtagc cgcggagctc gccctcgtcc
      481 gtctgcgcgc cgctcagtga gatcgagaag ttgttgcccg gcgtgtagtc catccggttc
      541 ggcgtgtcgg acgccatcag caccaggcca ccctcagtgg tgagcatcga gtgcatgatc
      601 ttgtcctgct cggccgggtc ttcgctggcg tgaaactcag cgaacgtact ggtggccagt
      661 tcccctccga acaccgactg gtagaacccc attgcctctc tggcgttgtc acggaaactt
      721 agatacgggt tgagttgggt gctcatgtct ccccttcctc ggtcggcttg atgttcagta
      781 cccggcagcg gagtgaaagc gcggccgagg cggtgtgcag cccggatgga gcccgggcga
      841 tctcagcgaa accggcgatg agccgccctc ggcaacgcct ccgacggttc cagcttagga
      901 gcgcccgcca cggcgccagc gctgcgcggt gaaggccaag ggcgcaccgg accggtcaca
      961 tcgccggcta tgcagctcac gattaagtga gttaactaac ttgacaacgg atgcccagac
     1021 agcacgatac taagtcagtc agctaactca cctagagagg tgcgtgcggg tatggcaccg
     1081 atccacgagc aggttctgtc agacaccgac tcccgcctgg tcctccgatc gaggctcggc
     1141 gcgatcaccc ttctgctgct gtgcgccgtg cagttcctcg acatcgcgga ctccgcgatc
     1201 gtcaacgtcg ccctgccgtc catccagcac agcctgggct tctcacagca gaacctgcag
     1261 tgggtggcca gtggctacat cctcacctac gggggcttcc tgctgctcgg cgggcgcctc
     1321 ggtgacctgc tcgggcgccg gcgcctgttg ctcaccggcc tggctgtctt cgcggtgtcg
     1381 tcactcgctg cggggctggc caacagcgcg gggctcctgg ttgccgcgag gcttgcgcag
     1441 ggcatcggcg ccgcgctcat ggccccggcg gcgctctccg agctcaccac cagcttccgc
     1501 gaaggcaagg accgcaatac ggcgctcggg gcctgggggg ccatcagcgg gctggccgcc
     1561 gcggcaggcg tcttcctcgg cggagtgat
//
LOCUS       DASRPQ010001655         1187 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_819300, whole genome shotgun sequence.
ACCESSION   DASRPQ010001655 DASRPQ010000000
VERSION     DASRPQ010001655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1187
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_819300"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            813..>1187
                     /locus_tag="VFD73_18860"
     CDS             813..>1187
                     /locus_tag="VFD73_18860"
                     /inference="COORDINATES: protein motif:HMM:NF013234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZI76036.1"
                     /translation="MNQVRRIEKPWGFEIWWAHTDHYAGKLLQVEQGHRLSLQYHQHK
                     DESSYVLSGAVRLSKGPGIDELVTTLMQPGDCWRTRPGEVHTVEALEPSQILEASTPQ
                     LEDVIRLMDDYGRASERTPEVAH"
BASE COUNT          236 a          371 c          383 g          197 t
ORIGIN      
        1 gcggaaccat cgtcgacaac gacgatctcc gggctaaatc cctcctgcat agtggcactg
       61 gagatcgcct cctggagaaa gcgaccctgg ttgtaacacg ggatgacgac cgaaacgctc
      121 aaagtgaacc tagatggagc gaacaagcga tgcagggtcc cttccacacg ccactaagct
      181 tttttcgaga ctcccggaac attatcctcc cagcaccaac gccgcaggtc acgggtagga
      241 ttcccgactt gcggtgcgat ggtcgggtgg gggtgcgcgt ccggcctcga gccccgcgtg
      301 cgtcgatagc gacggctagc cggaccacca ccgagaccac agcagcacgc gaatcagcag
      361 caacagcaac cgggttcatg cggaatcggc ctggttgggc ggcactcggt ttgctcgtgg
      421 gtaaagtcga ggcggccggg tgtgcgaagc ttgtctgctc atagagtctt ggactcgtaa
      481 gcccaagtca ggactagcat gttggtgatc ggcatcgaac tctttgggga cacatctgac
      541 caggagcttg gagcacgatc gctcccggtc ggaatcgtgg ctggtaccgt tgtcgcgcca
      601 gtaggcccac ttccgccgac catcggtgcg gttcgggcac ttccttctaa cagtcctccc
      661 gtgaccgcgt tcgcgggtgg acgccgaccc tggggacggg cacagccggc ccacccggct
      721 ccagatgtaa gaatctgtcc caatacggcc cgaggacttg acagcccatc gcgccagtgc
      781 catcctccat gccgggaggg ggctgggcag gaatgaatca ggttcgacgg attgagaagc
      841 cgtggggctt cgagatctgg tgggcacaca ccgatcatta cgccgggaag ttgctgcagg
      901 tggagcaggg acaccgattg tcgctgcagt accaccagca caaggacgag agcagctacg
      961 tgctgtcggg cgccgtgcga ctgtccaaag ggcctggcat cgacgagctg gtcaccaccc
     1021 tgatgcagcc cggcgactgc tggcgcaccc gccccggcga ggtgcacacg gtcgaggcgc
     1081 tcgagccgag ccagatcctg gaggcctcga cgccccagct ggaggacgtg atccggctga
     1141 tggacgacta cggccgcgcc agcgagcgca cgcccgaggt cgcacac
//
LOCUS       DASRPQ010001656         2563 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2737598, whole genome shotgun sequence.
ACCESSION   DASRPQ010001656 DASRPQ010000000
VERSION     DASRPQ010001656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2563
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2737598"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..250
                     /locus_tag="VFD73_18865"
     CDS             <1..250
                     /locus_tag="VFD73_18865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76037.1"
                     /translation="PQFIGLVRGQQVPGADARRSVVRVVYLDPRGRMILLDQQRLDPS
                     QAPAASSGNLRWVIGDVMLYLRGEPSQDVLRSLQARVR"
     gene            complement(278..>2563)
                     /locus_tag="VFD73_18870"
     CDS             complement(278..>2563)
                     /locus_tag="VFD73_18870"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI76038.1"
                     /translation="TVIYSTANGGFRPGLVSGLIMIVYARGFLAEPGALLQYTPANAY
                     TLVGLILIVPTTVVMVGRLREAAERGRQIALSRQEAERIDRRLSLLTEANRILASSLD
                     YEVTLRNLVRLIVPTLADWCAIHVSSEQGTLQFIAGAHRDPARDLLVRALCEYGSRQP
                     PFGVALHRADRGEVTEELMRACTLDDEHLKLLRSLAPGSYLRIPMVARGVSLGTITLA
                     VGPESGRTYGADDLAFAEEVASRAALSVDNARLYQAAREGDERYGMLFGSNPQPMWVF
                     DVDTLAFLDVNDAAVRHYGYSRDEFLAMTIMELLPPEDAPGLHHTLEPTGSHRGDVAL
                     IQHQRKDGTIVDMELVSHEMELDGRRARLVLARDISERTRTRVALHQSEEQLRQAQRM
                     DAAGRLAGGVAHDFNDLLTTIRGFSDLLLRDLPEQDRRRRDVEQIRKAADRGALLTRQ
                     LLSFGRQQILEARPIELNSVVKNMEGLIQRLIGADIHLVTELRPGLGQVKMDPGQLEQ
                     VLVNLVLNARDAMLSGGTLTIETGERQISGSARGRSLKPGWYVVLAISDTGTGMEGET
                     LAHVFEPFFTSQSPAGRKGLGLSIVYGIVKQNGGVVRVSSEPGLGTTVKVFLPRTEAE
                     AEPAGSVALLRGEETILLVEDEDGVRELLWKILTEHGYKVIEARHGRDALTVAGNYAE
                     PIQLLLTDVVMPEMGAGELVQQLLTERPELKVLFISGYTNDEVVRRGVSGNGAAFIQK
                     PFQPDELMRKVREVLDAPTTG"
BASE COUNT          429 a          865 c          817 g          452 t
ORIGIN      
        1 gccccaattc atcggcctgg tgcgcgggca gcaagtgccg ggtgccgacg cccggcgctc
       61 ggtcgtgcgg gtcgtgtatc tggatccgcg cggacggatg attctgctgg accagcagcg
      121 gctggaccca tcgcaggcgc cggccgcctc gagcggcaat ctgcgctggg tgatcgggga
      181 cgtcatgctc tacctgcggg gggaaccgag tcaggatgtg cttcgcagcc tgcaggcgag
      241 agtacgctga gggcctctcg gacggtcgct gttcaggtca ccctgtggtt ggtgcgtcaa
      301 gcacctctct gaccttccgc atcagctcat ccggctgaaa cggcttctga atgaaggcag
      361 cgccgtttcc gctcactcct cggcgaacca cctcgtcatt ggtgtagccc gagatgaaca
      421 ggaccttgag ctcgggccgc tcagtcagca gctgttgtac cagctctccc gcgcccattt
      481 ccggcatgac cacatcagtg agcaggagct ggatcggctc cgcgtaattg ccggccacgg
      541 tcagggcatc acgaccgtgg cgggcttcaa tcaccttgta gccatgctcg gtcaggatct
      601 tccagaggag ctcgcgcaca ccgtcttcgt cttcgaccag caggatcgtc tcctctcccc
      661 gaagtaacgc gaccgaaccg gccggctcgg cctccgcctc agtgcgcggc agaaacacct
      721 tgaccgtcgt gcccaggccc ggctcgctgg aaacccgcac gaccccacca ttctgtttca
      781 cgattccgta gacgatcgaa aggccgagcc ccttccggcc ggcggggctc tgagaggtga
      841 agaacggctc gaagacgtgc gccagggtct ctccctccat gccggtaccg gtgtcgctga
      901 tagcgagtac gacataccac cccggcttga gcgagcgccc tcgggccgag ccgctgatct
      961 ggcgttcgcc agtctcgatg gtcagtgtgc ccccgctcaa catcgcatcg cgggcgttga
     1021 ggaccagatt gacgagcacc tgctccagct ggccgggatc catcttcacc tgcccaaggc
     1081 cggggcgcag ctcggtcacc aggtgaatgt cggcgccgat cagccgctgg atcagaccct
     1141 ccatgttctt aacgacgctg ttcagctcga tcggtcgcgc ctccaatatc tgctgccgcc
     1201 cgaagctcag aagctggcgg gtcagcaatg cgccccggtc cgcggctttg cgaatctgct
     1261 cgacatctct gcgccggcgg tcctgctccg gcaagtcgcg caacagcaga tcgctgaagc
     1321 cgcgaatcgt cgtcagcaga tcgttgaagt cgtgggccac tcccccggcc aggcggccgg
     1381 cggcatccat gcgctgggcc tggcggagtt gctcctcgct ctgatgcagc gccactcggg
     1441 ttcgggtgcg ctcgctgatg tcgcgagcca ggaccagccg ggcacggcgc ccatcgagct
     1501 ccatctcatg ggacaccagc tccatgtcca cgatcgttcc gtctttgcgc tggtgctgaa
     1561 tcagcgcgac atcgccgcga tgtgagccgg ttggctccag cgtatggtgc agcccgggag
     1621 cgtcttccgg cgggagtagc tccatgatgg tcatggccag gaactcgtcc cggctgtacc
     1681 cgtagtggcg aacggcggcg tcgttgacat cgaggaacgc gagggtatcc acgtcgaaca
     1741 cccacatggg ctggggattg ctcccgaaca gcatgccgta gcgctcgtct ccttcgcggg
     1801 ccgcctgata cagacgggcg ttgtcgacgc tcagcgccgc ccggctggcc acctcttcgg
     1861 caaaggcgag atcgtccgcg ccgtacgtcc ggcccgactc gggtcccaca gcaagggtga
     1921 tggtaccgag ggaaaccccg cgagccacca tgggaatacg gaggtacgat ccaggcgcaa
     1981 gcgagcggag cagcttcaga tgctcatcgt ccagagtgca ggctcgcatc agctcttcgg
     2041 tcacttcacc ccggtcggca cggtgcagcg ccactccaaa gggcggctgg cgagagccat
     2101 actcgcagag ggcgcgtacc agcagatctc gcgcgggatc gcggtgggct ccggcgatga
     2161 actgcagcgt tccctgttcg ctggacacat ggatggcgca ccagtccgcc agcgtgggca
     2221 cgatcagccg caccagattc ctgagcgtca cctcgtagtc cagtgacgac gcgaggatcc
     2281 ggttggcttc cgtgaggagt gacagccgcc gatcgatccg ctccgcctct tgcctcgaca
     2341 gcgcgatctg ccggccccgc tcggcggctt cccgcagccg cccgaccatg accaccgtcg
     2401 tcggcacgat gaggatgagg ccgaccaggg tataggcgtt ggcgggggtg tactgcaaca
     2461 gcgctcccgg ctcggcgaga aacccccggg cgtagacgat catgatcagc ccgctcacca
     2521 gccccgggcg gaatcctccg ttggccgtgg agtagatgac ggt
//
LOCUS       DASRPQ010001657         1072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4588987, whole genome shotgun sequence.
ACCESSION   DASRPQ010001657 DASRPQ010000000
VERSION     DASRPQ010001657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4588987"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            96..1043
                     /locus_tag="VFD73_18875"
     CDS             96..1043
                     /locus_tag="VFD73_18875"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HZI76039.1"
                     /translation="MIDKVVASAAEAVKDIPDGASLAVGGFGLCGIPVSLIEALHSQG
                     TSDLETVSNNCGVDDWGLGILLKDGRIRRTISSYVGENKEFITNSGTDISRLVTVTAV
                     TGQQQRKDGSVKKEISTILVPTDTPGFKAEKAYNKVGWNASDTHPLTLRDVTVPEENL
                     LGERGRGYANFLSILDEGRIAIAALATGAAQGCVDFSVRYAKDRSAFGTNIGKHQAIS
                     FKVARMQARAHTARLTYYDAAARMLAGKPFKTQAAIAKMVAGEAAMDNARDATQVFGG
                     YGFINEFTVARHYRDSKILEVGEGTTEVQLMLIARELGL"
BASE COUNT          215 a          335 c          349 g          173 t
ORIGIN      
        1 ggggagggca ccaccgaggt ccagttgatg ctcatagccc gcgagctggg actgtaactt
       61 cacgtgggat cggcagtggc agggaaggat caaggatgat tgacaaggtt gttgccagcg
      121 ccgcggaggc ggtcaaggac atcccggatg gagcctcgct ggctgtggga ggtttcggcc
      181 tctgcggaat cccggtctcc ttgatcgaag ccctccacag ccagggcact tctgatcttg
      241 aaactgtcag taacaactgt ggagtggacg actggggcct cggcattctc ctcaaggacg
      301 gacgcatccg ccgcaccatc agctcgtatg tgggcgagaa caaggaattc atcaccaact
      361 ccggaacgga catcagcagg ctggtcaccg tcaccgccgt caccggccag cagcagcgca
      421 aggacggcag cgtcaagaag gagatctcca ccatcctggt gcccaccgac acgcccggtt
      481 tcaaggcgga gaaggcgtac aacaaggtgg gctggaacgc ttcggacacc caccccctga
      541 cgctgcggga tgtcacggtg ccggaagaaa acctgctggg cgagcggggc cgcggctacg
      601 ccaacttcct ctccatcctg gacgaaggca ggatcgccat cgccgccctt gccaccggcg
      661 cggcccaggg ctgcgtggat ttttcggtcc gctatgccaa ggaccgcagc gccttcggga
      721 ccaatatcgg caagcaccag gccatctcct tcaaggtcgc ccgcatgcag gcacgcgccc
      781 acactgcccg cctgacgtac tacgatgcgg ccgcccggat gctcgcgggc aagccgttca
      841 agacccaggc ggccatcgct aagatggtcg caggcgaggc ggccatggat aatgcgcggg
      901 atgccaccca ggtattcggc ggctatggct tcatcaacga gttcaccgtg gcgcgccact
      961 accgggactc caagatcctg gaagtggggg agggcaccac ggaggtgcag ctgatgctga
     1021 tcgcccggga actggggctg taacgggccc ggtggccgtg tctgtcgaga gt
//
LOCUS       DASRPQ010001658         1010 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3362915, whole genome shotgun sequence.
ACCESSION   DASRPQ010001658 DASRPQ010000000
VERSION     DASRPQ010001658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3362915"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..858)
                     /locus_tag="VFD73_18880"
     CDS             complement(<1..858)
                     /locus_tag="VFD73_18880"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZI76040.1"
                     /translation="MSDPAKQSDQPGDPRGTYHSGPFPKQEQKQPGLTAPMEPQPDHG
                     ELSYEGSGALEGKAALITGGDSGIGKAVAIAFAREGADVAISYLPEEEDDAQDTAEWL
                     RKAGRRALLLAGDGRNEDFSTAIVADVVAEFGRLDVVVLNAAYQKNRESLESLPTEEF
                     DRVFKTNVYSLLWTARAAVPHLKAGASIITTASIQAFNPSPGLIDYAMTKAAQVAFTK
                     ALAQELGPKGIRVNAVAPGPIWTPLIPATEWPDKLPKFGQDTPLQRAGQPAELAPAYV
                     LLASDDGSYM"
BASE COUNT          157 a          312 c          333 g          208 t
ORIGIN      
        1 catgtagctg ccgtcgtcgg aggcgagcag gacgtaggcg ggggcgagtt cagccggctg
       61 gccggcacgc tgcagcgggg tgtcctggcc gaacttgggc agcttgtccg gccattccgt
      121 cgctgggatg aggggcgtcc agatgggtcc cggggccacg gcgttgacgc ggatcccctt
      181 gggcccaagt tcctgggcga gggctttcgt gaaagccacc tgcgctgcct tggtcatggc
      241 gtagtcaatg agtccgggag acggattgaa ggcctggatg gatgcggtgg tgataatcga
      301 ggcgcctgct ttgaggtgcg gcaccgctgc ccgggcagtc cacagcagcg agtacacatt
      361 ggtcttgaag acgcggtcga attcctcggt gggcagcgac tcaaggctct cgcggttctt
      421 ctggtacgcg gcgttcagca ccaccacgtc gagccggcca aactcagcaa caacgtcagc
      481 cactatcgcc gtgctgaagt cctcgttcct cccgtcgcct gccagcagca gcgcgcgccg
      541 tcctgctttc cggagccatt cggccgtgtc ctgggcgtca tcctcctcct ccgggaggta
      601 ggaaatggcg acgtccgcac cctcgcgtgc gaaggcgatg gccaccgcct tgccgatgcc
      661 ggagtcgccg cccgtgatga gtgccgcttt gccttccagc gcgccgcttc cctcatagct
      721 cagctcgccg tgatcgggtt gcggctccat gggcgcggtc aggccgggct gcttctgctc
      781 ctgcttcggg aagggccctg agtgatacgt tccccgggga tcaccgggct ggtcagactg
      841 ctttgctgga tcgctcattg ttcacctgct cacgttgtcg ggctgccgga ttgttcgaac
      901 ctaacgcagg tttgaggagc aagtccacaa cctgacacaa tactagtcag caaccttagt
      961 atttgttgaa ttaggtcagg catgggccta ggtttggagc aagcccgccc
//
LOCUS       DASRPQ010001659        12624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_504194, whole genome shotgun sequence.
ACCESSION   DASRPQ010001659 DASRPQ010000000
VERSION     DASRPQ010001659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12624
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_504194"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1778
                     /locus_tag="VFD73_18885"
     CDS             <1..1778
                     /locus_tag="VFD73_18885"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HZI76041.1"
                     /translation="SSIILALSRIQPAAVSDLLNQLTASQDIASRLALARTLGRMRWP
                     GAADQLVRLAADPDAGVRLAAIQALSHLPAEGPLPDAAQQVLDAALADSVTSVRAAAA
                     DACGRMRLPQYGRTLLRLVERDPASEVRERAALAIGLLRTQGGEEALMAAGRRPEPPE
                     VRAAAALAAGAFNRGSLVGLILQMPDEVSVRQVLRDRLKHDAWFRLLSRKLPRASDVE
                     IRSLAAEPGAEEASLSIGMERILDAGERVRIISGLRAFQGEDSRVTLLQSVRTDPSPE
                     VRTAALTSVAELLDPDELLDFGSRALGDPSPMVRRTAIGLFARVPPERALPRLIHSLR
                     LDEDAIVLAAAGGLAEQHFEAYRAAVLTVPLQDRRAALVARLSRYVHHPDLTGVLGFI
                     ARSSNPEVRQTVGEVWCQRPDSAEPVALEALIADPVISVRLTATAAAAAAERYDLLDR
                     LRQDPDPSVRREIAVVLGRFGQTRAGGEVVLRNLESDSEMIVRAAAHVALLLIGIPVP
                     LPPGLEPSVAAEAVRDTGELESLREIARTAPSEERRLAAGLALALVQDEAAKEIAHTD
                     PAPSIRHRVAGALELALPEDARELR"
     gene            1775..3331
                     /locus_tag="VFD73_18890"
     CDS             1775..3331
                     /locus_tag="VFD73_18890"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI76042.1"
                     /translation="MKQAIINWLIVFAVVVQPLFLLYFVVYNTYTLWLIVLSAREVRR
                     RVAGHFIEDLDLIDQRDLTKPLTMIVPAFNEEVTIVDSVTGLVHCDYPRFEIVVVNDG
                     STDSTLERLQRAFQLRRTDLPYREAIATAPIRAIYLATTTLPPGVTQIIVIDKENGGK
                     ADALNAGINASTSPYFVSLDADSILDHHALKELMRVVQEDPSVIAVGGQVAIANGCVV
                     QNSRVVRVGLPARSLPRFQMVEYLRSFTTMRTGLDRVHAVLILSGVFAVFEKETVIRA
                     GGYLTPFLRSRLVEEYVGTGVATVCEDMEIIVRLHRFVLDKLHDRRIAFLPHPVAWTE
                     VPETFGSLRKQRGRWYRGLRESLRYHQAMLWKSKFGRIGWFALPAFWAFEYFGPLVEI
                     AGYGFVLFLFLVQMLLGQPFLSYEYLVAFLLACLGYGILVNVLAVLVGAWRFRYGLAD
                     RLQRRLLPFTRRREVLTLLLYAVLENFGYRQLTLYWRLRGLWDAWQGKTGWEKFGRVG
                     FRPGEATAHG"
     gene            3324..4373
                     /locus_tag="VFD73_18895"
     CDS             3324..4373
                     /locus_tag="VFD73_18895"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI76043.1"
                     /translation="MVETAKPSILLVDDDPDMARLIQHVLSSTGLGPARHASTGREAV
                     ASLDGIDIVLLDHQLPDSSGLDLLEAIRGRPAPPAVILITAHGNESLAASALRRGADD
                     YLAKDAALADLLPQILERVRRSRELRKALAAAEQELMRAERLAAVGEMTVTLHHEINN
                     PLMAAFADVELLLAGGDSSPDQRRQGLENIKQALRRIRDIVQRIGELREARSKDYLRG
                     IRMLDLERTAEAPQRINRGTALLYLPDEGNARVVSLLLKDAGFQVQHASSVADLEKAA
                     DSIGISMIVVAGSSGTPGAHPLAGFVPSAHRSYRLVALVGGNGAAALAAGADQVVQLP
                     FDPRTFTAEVTAALA"
     gene            complement(4365..5402)
                     /locus_tag="VFD73_18900"
     CDS             complement(4365..5402)
                     /locus_tag="VFD73_18900"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HZI76044.1"
                     /translation="MNQQANLFAQQEANRHRSLYLVIGFIAFFAWVGFGGDLAFYFLT
                     SNTAPGAYHHVVPFIGILTTIAAGGICWYSWRFGPEKVLWATGAWELIEPATPEQKQL
                     VNVVEEMAIASGIPRPRIWIVPDDDPNAFATGRDPPTASIAVTQGLLGKLSRDELQGV
                     IAHEMAHIQNLDIRLMTLLAGMVGAIALISDGTGRMLRGGGIRSGGGASERRSSQKGS
                     GPLGLIILVLWLLTLVLAPVVSRLLAMAVSRKREYLADATGAQFTRNPLALASALEKL
                     EGASGATRSITQGAAHLCIVDPAPSALAEKEGFLADVFVSHPPIRQRIIRLKGMAYQQ
                     AKMDGTAAALS"
     gene            complement(5399..5971)
                     /locus_tag="VFD73_18905"
     CDS             complement(5399..5971)
                     /locus_tag="VFD73_18905"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HZI76045.1"
                     /translation="MSTVVLLVVLAVIVLWVIGAYNGLVSLKNQVLNAWKQIDVQLKR
                     RHDLIPNLVNTVKGAMDFERSTLDAVITARNRAVSATGVRQTAAAEGELTQALGRLFA
                     LTEAYPDLKSTGNVAQLQEELTSTENKIGFARQLYNDVATQYNTRQMQFPTNLVAGLA
                     KASPAELWEIEDTGDRVLPVVDLSLDKPAS"
     gene            complement(5995..6753)
                     /locus_tag="VFD73_18910"
     CDS             complement(5995..6753)
                     /locus_tag="VFD73_18910"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HZI76046.1"
                     /translation="MNPAASAPPAAPDPLATLREYRALAPWGLRDLAALAGGILDASG
                     VVPVNAAARARPSERTIRFYVARGLVSPPDGRGTAAVYSYRHLLQVLAIKLRQMEGAT
                     LESMLKEFAGMTGDLIERRTASALGPGLPPPEQLPLLRTPGTGRGRVGRAVMAWLSPV
                     EGLGSASSICRRIPVSPGVEVLMDEQHPALRLNADPGVIAEAIRQALSTVVGLEPVIS
                     APPDLEISSEPSWAASQPESVMLETSQLTTESPS"
     gene            complement(6750..7160)
                     /locus_tag="VFD73_18915"
     CDS             complement(6750..7160)
                     /locus_tag="VFD73_18915"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI76047.1"
                     /translation="MTRRILVVDDEPALRRTLERALTSLGYEVSSVADPDSAYQILAE
                     SNFDLVLLDLRLPQMAGDTLYLAIVRHWPRLLGRVILMSGDIHGPERDWPAELVHCPI
                     LHKPFSLDTLGRIVSRVLAAAEPSVDFLEGNGNP"
     gene            complement(7157..7954)
                     /locus_tag="VFD73_18920"
     CDS             complement(7157..7954)
                     /locus_tag="VFD73_18920"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI76048.1"
                     /translation="MRHLLLAAVPAERLARLRMLDPERYQWVSGSGWPEVADTIRARP
                     VEMAVVDPLLGGEARAHGIERIRLLFPSLPLLIYTELAPSTASVLLQLGRSGIRRVVF
                     QRFEDAPASLRVALQAELEQSASQQVMQALGSALNGLPRELLRALEGMLHAGDEAPTV
                     SALAERAQLTRRTCERWFTKVGLPSPRMVMILTRLLYAHRLLLDRGYTVEDVALKLGY
                     SKTKTLQMHLRAVFGVTAGELRVSLSTEEAFMIVADRYLTPMSQAAS"
     gene            8064..8207
                     /locus_tag="VFD73_18925"
     CDS             8064..8207
                     /locus_tag="VFD73_18925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76049.1"
                     /translation="MSRLKTYGLALALLASAALTSACTKMDTTGPSDQPQASFEEGQG
                     AHN"
     gene            complement(8255..9547)
                     /locus_tag="VFD73_18930"
     CDS             complement(8255..9547)
                     /locus_tag="VFD73_18930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76050.1"
                     /translation="MYTPQRLFGEVGSSTDVLGHEPFLERARLQREQEHDGSARLALA
                     AYVVARLVDRLLTLDLDPAGMQSFHWQLEAVRRHLSELPANAPETAHLLGVVQAIPQD
                     GQRTPSLWMSLTAYAYFLEHEARLEESLEMLTLAARAQGSDTTPSDFTAYALFAARLN
                     RQLARWDGAKECYAAAEECAARLGEPMSMLRGRLGRGAVHRGQGNYPAAREIAESVLR
                     EATALGLAEAQALASSDLGVVYGALGLPLEALQAHYRAFCLTADRVEQMRTLGDLALG
                     LRAIHAYEAARLAFQIVASSQARVLVRANALLELMDLEASVGDRVSFERYRVAVEEFQ
                     SSMSPTMLVDYNYKLGMGFAQFGQTKRAQASLSTALQLAEEHRLNAWYFKVEQALHTL
                     ANRGESTAAPVEASPLSEAPSIREIELGLREYAAAPAV"
     gene            9717..10142
                     /locus_tag="VFD73_18935"
     CDS             9717..10142
                     /locus_tag="VFD73_18935"
                     /inference="COORDINATES: protein motif:HMM:NF023444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HZI76051.1"
                     /translation="MRRGVTLVELMLVLAVAGILFGVAVPALSLLLDSLAVHAAISHI
                     EAAHARARLLAITRGKVITLAIDSARIAISPRNDTLALWSEAGPSAQRVHLEGAQRQF
                     TFSPEGFTLGVSNASLQLSRGATRQTLVISRLGRVRVLP"
     gene            complement(10242..10616)
                     /locus_tag="VFD73_18940"
     CDS             complement(10242..10616)
                     /locus_tag="VFD73_18940"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI76052.1"
                     /translation="MSPLHILLLERNDSDQSGLREILRGAGHRVVTALNTEHVAEALA
                     GGEFDRLVLDLTWPELDIASLRRALFPRRDPEPDSLEDAERRHLALVLRHTSGNKRKA
                     ALLLGISRSTLLNKVRKYGLEA"
     gene            complement(11267..11827)
                     /locus_tag="VFD73_18945"
     CDS             complement(11267..11827)
                     /locus_tag="VFD73_18945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76053.1"
                     /translation="MRALSFVALLLAGTSPLSAQTIVHPAAPLDSARVVVRDALVLFS
                     DTLGTIGAAAARLQRDNSQASGPVLLSRARMMQEACAHSIQMVPATRDAVLATKNSQA
                     KRLKHQKDLVLALDRLKVALGRCESEFAAMSRPGQSETVRGYANARADQVREALRSYE
                     QTLHDFYGVMGIRVVPPGAGGRPASG"
     gene            complement(11828..12439)
                     /locus_tag="VFD73_18950"
     CDS             complement(11828..12439)
                     /locus_tag="VFD73_18950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76054.1"
                     /translation="MSTPQTLVVRTFTDRAEGLSHFVLRAGEAPRLLAFDDALGCPVE
                     TALAALEWTGAVGILQDDDLLHAARLTSETAAAVIERKSQDGRRYVYLGPRLDAPPMD
                     VFEGAILFDEPGVKAVEFTQRAHGLAHFLRATAGAGALLALLGRRAPEVRHLRRWLGP
                     IIHELDLPRPLVAGWFAASSAGGLFSSLEGEPTYRYIEVGMES"
BASE COUNT         2302 a         4039 c         4031 g         2252 t
ORIGIN      
        1 gctcgagcat catcctcgca ctgagccgga ttcagcctgc agctgtttcg gatctgctga
       61 atcaactgac cgccagccag gacattgcca gtcggctcgc gctcgcacgc actctcgggc
      121 ggatgcgctg gcccggggcc gctgaccagt tggtgcggct ggccgctgat cccgacgccg
      181 gagtcaggtt ggctgccatt caggcgctga gtcacctccc agccgaaggc ccgctgcccg
      241 atgccgcaca acaggtgctg gacgcagccc tggcggactc ggtgacttcg gtccgggccg
      301 cggcggcaga tgcatgtggt cgcatgcggc tgccccagta cggacgaacc ctgctccgcc
      361 tggtcgagcg cgatcctgcg tccgaggtcc gcgaacgcgc tgcgcttgca atcgggcttc
      421 tccgcactca gggaggcgaa gaggcgctca tggccgccgg ccggaggccc gaacctcccg
      481 aggtccgcgc cgcggcggca ctggcggcag gcgctttcaa tcgcggaagt ctggtcggct
      541 tgattctcca gatgccggac gaagtcagcg tacgccaggt gctgcgcgat cgactgaagc
      601 acgacgcgtg gtttcgtctg ctcagtcgaa agctgccccg cgccagcgat gtggaaatcc
      661 gctccctggc tgcggagccc ggagcggaag aggcctcgct cagtatcggg atggaacgaa
      721 ttctcgatgc cggcgagcgg gttcggatca tcagcggact tcgggcgttc cagggcgaag
      781 acagcagagt gacgctgctg cagagcgttc ggaccgatcc cagcccggaa gtgcgtaccg
      841 ccgctttgac atcagtcgcc gagctactcg accccgatga gctgttggat ttcggcagtc
      901 gcgcgctcgg ggacccgagt ccgatggtgc gccgcaccgc gattggcctg tttgcgaggg
      961 taccgccgga gcgagccctg ccgcgactga tccactcact tcggctggac gaggacgcga
     1021 tagttctcgc agctgcaggg ggcttggccg agcaacattt cgaggcctat cgcgcggcgg
     1081 tgcttacggt cccgctgcaa gaccgtcgag cggcgctggt ggcccggctc tctcgatacg
     1141 tccaccatcc ggatctcacc ggtgtcttgg gattcatcgc tcgaagcagc aaccccgaag
     1201 tgcggcagac agtgggagag gtctggtgcc agcgccctga ctcggcggag ccggttgcgc
     1261 tcgaagcatt gatcgccgat ccggtgatct cggtccggct caccgctacg gccgcggcag
     1321 cagcagcgga acggtacgac ctgctggacc gccttcgtca ggaccctgat cccagcgtcc
     1381 ggcgcgaaat tgccgttgtc ttgggaaggt tcgggcagac ccgcgccggc ggcgaggtcg
     1441 tgctgcgcaa tttggagagc gactccgaaa tgatcgtccg agcggccgcg catgtggcgt
     1501 tgctgctcat tggcattccg gttccgctgc cgcccgggct ggagcccagt gtggcggccg
     1561 aggcggtgag agataccggc gagctggaaa gcttgcgcga gatcgcccgg actgccccct
     1621 ccgaggaacg ccggctcgcc gccggactgg cattggcgct ggtgcaggac gaggctgcaa
     1681 aggagatcgc ccacaccgac ccggcgccat ccattcgcca ccgggtggct ggggcactgg
     1741 agctcgcact tcccgaagac gcgagagagc ttcggtgaaa caggcgatca tcaactggct
     1801 gatcgtcttt gccgtcgtag tgcagccact cttcctgctc tacttcgtcg tgtacaacac
     1861 ctataccctt tggctcatcg tcctctcggc gcgagaggtg cgccgccggg tggccggcca
     1921 cttcatcgaa gatctcgatc tgatcgatca gcgtgatctg accaagccac tgaccatgat
     1981 cgtgcctgcc ttcaacgagg aggtcaccat cgtggacagc gtcacgggcc tggtccattg
     2041 cgactacccg cgcttcgaga tcgtggtggt gaacgacggg tcgaccgact cgactctgga
     2101 gcgcctccaa cgcgcgttcc agctccgtcg gaccgacctg ccctaccgtg aagcgatcgc
     2161 caccgcgccg atccgagcga tatacctggc caccaccaca ctgccgccgg gagtcacgca
     2221 gattatcgtg atcgataaag agaatggcgg gaaagccgac gccctcaatg ccggtatcaa
     2281 cgcctccacc agcccgtact tcgtttcgct cgatgcggat tccatcctgg accaccacgc
     2341 gttgaaagag ctgatgcgcg tggtgcagga ggaccccagc gtgattgccg tcggagggca
     2401 ggtggccatc gcgaacggct gtgtcgtcca gaacagccgg gtggtgagag tcggtctgcc
     2461 ggcccggtca ctgccccgct tccagatggt ggaatacctg cggtcgttta ccaccatgcg
     2521 gaccggtctc gaccgggtac acgcagtcct gatcctgagc ggcgtttttg ccgtgttcga
     2581 gaaggagacg gtgatccgag ccggaggtta tctcacgccg tttctccgca gccggctggt
     2641 cgaggaatac gtcgggaccg gcgtcgcgac cgtgtgtgag gacatggaga tcatcgtccg
     2701 gttgcaccgg tttgtgctgg acaagctgca cgatcgccgg attgcttttc tcccccatcc
     2761 ggttgcctgg accgaagtgc ccgagacgtt cggctccctg cgcaagcagc ggggccgctg
     2821 gtaccgcggc ctccgagagt cgctgcgcta tcatcaggcg atgctgtgga agtccaagtt
     2881 tggccggatc ggctggttcg cactgcccgc gttctgggca ttcgaatatt tcgggccgct
     2941 ggtcgagatc gcgggctatg gctttgtgct cttccttttc ctggtccaga tgctgctcgg
     3001 tcagccattc ctcagctacg agtatctggt cgcgttcctc ctggcctgtc tgggatacgg
     3061 gattcttgtc aatgtgctcg ccgtgctggt cggcgcctgg cggttccgat acgggctggc
     3121 cgaccgcctc cagcgccgac tgctgccctt cacccggcga agagaagtgt tgacgctgct
     3181 cctgtacgcc gtactggaaa acttcgggta ccgtcagctc accctctact ggcgactgcg
     3241 cggtctctgg gatgcgtggc agggaaagac cggctgggag aagttcggcc gggtcggttt
     3301 ccggcccgga gaggcaacgg cacatggttg agaccgcaaa gcccagcatc cttctggtcg
     3361 acgacgaccc agacatggct cgactgatcc agcacgtcct ctcctctacc gggctgggac
     3421 cggcaagaca cgctagcacc ggcagggagg ccgtcgcgtc cctcgacgga atagatatcg
     3481 tcctgctgga tcaccagctc cccgattcca gcggcctgga tctgctcgag gcgatccggg
     3541 gccgcccggc gcctcccgcg gtcatcctga ttaccgccca cggtaacgaa tcacttgccg
     3601 cgtccgctct ccgccggggg gcagacgatt acctggccaa ggacgccgcc ttggcagatc
     3661 tcctaccaca gattttggag cgagtccgcc gaagccggga gctgcgaaag gcgctggctg
     3721 ccgcggagca ggagctgatg cgagcagagc gactggccgc ggtaggagaa atgacggtga
     3781 cgctgcatca cgagatcaac aatccgttga tggcagcgtt tgccgatgtg gagctactgc
     3841 tggccggcgg agattcgtca ccagatcaac ggcgccaagg cctggagaac atcaagcagg
     3901 cgctccggcg catccgtgac atcgtgcagc gtattggaga gctgcgggag gcacggagca
     3961 aggattacct gcgcggaata cggatgctgg acctggaacg caccgcagag gcaccccagc
     4021 gaatcaaccg cggaacggcc ctgctgtacc tcccggatga gggcaacgca cgggtcgtct
     4081 cgctgttgtt gaaagatgcc gggtttcagg tccagcatgc gagctcagtc gcggatttgg
     4141 aaaaagccgc cgacagcatc ggtatctcga tgatcgtagt ggcgggaagc tcgggcacgc
     4201 cgggggcgca tccccttgcc gggttcgtgc cgtccgctca tcggtcgtac cggttggtcg
     4261 cgctggtagg aggaaacggg gccgccgcgc ttgccgctgg agccgatcag gtcgtgcaat
     4321 tgcccttcga ccccaggacg ttcaccgcgg aggtaacagc ggctctagct tagcgccgcg
     4381 gcagttccat ccatcttggc ctgctgatag gccatcccct tgagtcggat gattcgctgc
     4441 cgaatgggcg gatgcgacac gaagacatcg gccagaaatc cttccttctc tgccagcgcc
     4501 gagggggcgg gatccacgat gcagagatgc gcggcgcctt gggtgataga acgggtggca
     4561 ccgctcgcgc cctcgagctt ttccagggcg ctggccaacg ccagcggatt gcgggtgaat
     4621 tgggcgccgg tggcatcggc cagatattcg cgcttccggc ttaccgccat ggccagaaga
     4681 cgcgaaacca ctggcgcgag caccagggtg agcagccaga gcaccaggat gatcagcccg
     4741 agcggaccac ttcctttctg gctactccgc cgctcggatg ctccgccgcc ggagcggatt
     4801 ccgccgcccc gcaacattct cccggtgccg tcggagatca gcgcaatcgc ccctaccatt
     4861 ccggccagca gagtcatgag ccgaatatcg aggttctgga tgtgagccat ctcgtgcgcg
     4921 attacgccct ggagctcatc gcgtgagagc ttgcccagca gtccctgggt caccgcaata
     4981 ctcgcggtgg gggggtcgcg cccggtggca aaggcgttgg ggtcgtcgtc cggaacgatc
     5041 cagattcggg gccgaggaat tcccgacgca atcgccatct cctccaccac gttcaccagc
     5101 tgcttctgct ccggtgtggc cggctcgatc agctcccacg caccggttgc ccacagcact
     5161 ttctccggtc cgaagcgcca ggagtaccag cagattccgc ccgccgcgat ggtggtgagt
     5221 atgccgatga acggcaccac gtgatgatac gcgcccggtg ccgtattgga ggtcaggaaa
     5281 taaaacgcga gatcaccacc gaaccctacc caggcaaaga acgcgataaa cccgatgacc
     5341 aggtagaggg aacggtgtcg attggcttcc tgctgggcaa agaggttcgc ctgctggttc
     5401 acgaagccgg tttgtccaac gaaagatcga caactggaag gacccgatcc ccagtatctt
     5461 cgatctccca caactcggcg ggcgaggcct tggccagtcc tgcaaccagg ttggtgggga
     5521 actgcatctg ccgcgtattg tactgggtgg caacgtcgtt gtagagctgg cgggcaaatc
     5581 cgatcttgtt ctctgtgctg gtgagctctt cctgcagctg cgccacattg ccggtggact
     5641 tgaggtcagg gtacgcctca gtcagagcga acagccggcc gagcgcctgt gtgagctcgc
     5701 cctcggcagc ggcggtttgc cgcacgccgg tggcactgac cgcccggttc cgtgccgtga
     5761 tgaccgcatc gagggtggag cgctcgaaat ccattgcccc cttgaccgtg ttcaccagat
     5821 tgggaatcaa gtcgtgccgc cgcttgagct gcacatcgat ctgcttccac gcattcagga
     5881 cctggttttt gagcgagacc aagccgttgt aggcgccgat gacccagagg acaatgacgg
     5941 caaggacaac cagcaggacg acagtgctca tgcggattcc ttggacgtga tgagttagct
     6001 cggagattcg gtggtgagct gcgacgtctc cagcatgacc gattccggtt gcgacgcggc
     6061 ccaggacggc tccgaactga tctcgagatc gggcggggcg gaaatgaccg gctccagtcc
     6121 cacgacggtg ctgagcgcct ggcgaatggc ctccgcaatg actcccggat cggcgttgag
     6181 ccgcagcgcc ggatgctgct catccatcag tacctcgacc ccgggcgaca ccgggatccg
     6241 ccgacagatg ctgctggcgg agcccagtcc ttccaccggc gagagccagg ccatgaccgc
     6301 gcgcccgacg cgcccccggc cggtaccggg cgtgcgcagc aacgggagct gctccggagg
     6361 tggcagtccg ggcccgagag cactcgcggt acgccgctcg atcagatcgc cggtcatgcc
     6421 ggcgaactct ttcagcatcg attcgagggt ggcgccctcc atctgccgga gtttgatcgc
     6481 gagcacctgg agcaggtgcc gataggagta caccgctgcg gtgccccggc catccggcgg
     6541 gctgaccaag cctcgtgcga cgtagaaccg gatcgtcctc tcgctggggc gggcacgcgc
     6601 cgcggcattc accggcacga ccccggatgc gtcgaggata cctcccgcca gcgcggccag
     6661 gtctctgagt ccccagggcg ccaacgcgcg atactcacgc agggtggcaa gcggatcggg
     6721 tgcggcgggg ggcgcggagg ctgcagggtt catgggttcc catttccctc gaggaagtct
     6781 acgctgggct cggccgccgc gagcacccgg ctcacgattc gtcccagcgt gtcgagactg
     6841 aacggcttgt gcaagatcgg gcagtggacc agctccgctg gccaatcgcg ctccggcccg
     6901 tggatgtcac cgctcatgag aatgacacgg ccgagcagac gtggccagtg ccggacgatt
     6961 gcaaggtaca gcgtgtctcc ggccatctgg ggcagccgga gatccagcag gaccagatcg
     7021 aagttggact cggcgagaat ttgataggcg gagtcaggat cggcaactga ggatacttca
     7081 taaccaaggc tggtcagcgc tcgttcgagg gtccggcgca aggccggttc gtcgtcgaca
     7141 acgagaatcc ggcgggtcac gaagcggcct ggctcatcgg cgtcagatag cggtcggcga
     7201 cgatcatgaa ggcttcctcg gttgagagcg agactctgag ctctcccgcg gtaactccga
     7261 aaactgctcg caaatgcatt tgcagcgttt tggtcttgct gtatcccagc ttcagcgcga
     7321 cgtcttccac cgtatacccc cgatcgagca ggagccggtg ggcatagagc agccgggtca
     7381 agatcatcac cattcggggt gagggtagcc ccaccttggt gaaccaccgc tcgcaggtcc
     7441 ggcgcgtcaa ctgcgcccgc tccgccaacg cgcttaccgt cggcgcctca tcgccggcgt
     7501 gcagcatacc ctcgagcgcc cgaaggagct cgcgcggcag accattgagt gcacttccca
     7561 gcgcttgcat cacctgctgc gacgcgctct gttccagctc agcctggagc gcgacccgga
     7621 gcgacgcggg tgcatcttca aagcgttgaa acacgacccg ccggatcccg gaccgtccca
     7681 actgcaggag gacggaggcg gtagaggggg cgagctcggt atagatcagg agcgggagcg
     7741 aagggaaaag taggcgaatg cgttcgattc cgtgagcccg ggcctctcca ccgagcagcg
     7801 gatccaccac ggccatttcg acgggtcggg ctcggatggt atccgccacc tccggccagc
     7861 cactcccgct cacccactgg tagcgctcgg gatcgagcat gcggagccgg gccagacgct
     7921 cggcgggaac tgcggcgagg agcaaatgtc gcaaatcggc ccctatttgt cgcaaatggg
     7981 ccctaaaacc gaaactggtg aatccccaga ttggcgctgc ccttcacctc ccgggcacta
     8041 ccgccattct gaaagggatt cacatgtctc gcctcaaaac ctacggtttg gcactcgcgc
     8101 tcttggcctc cgctgcactg acgtcggcct gcaccaagat ggacacgacc ggtccttcgg
     8161 atcagccaca agcctccttc gaagaaggtc aaggcgcgca caactgagtg ccccatgacg
     8221 caacgtcgaa gaatgcgatc gaccgacgtg ttgtctagac ggcaggcgcg gcagcgtatt
     8281 cccgcaaccc gagctcaatc tcccggatcg aaggggcctc gctgagaggc gaggcctcca
     8341 cgggagcggc tgtgctctct ccccggttcg ccagcgtatg taaggcttgc tccaccttga
     8401 aataccaggc gttgaggcgg tgctcttcag ccagttgcag agcggtcgag agtgaggcct
     8461 gagcccgttt ggtctgacca aactgcgcaa accccattcc cagtttgtag ttgtagtcca
     8521 ccagcatggt gggtgacata gagctctgga attcttcgac agcgacacga taccgctcga
     8581 aagaaactcg atcgcccacg ctggcctcga gatccatcaa ctccagcagt gcgttggcgc
     8641 gaaccagcac tcgcgcctgt gagctcgcca cgatttgaaa tgcgaggcgc gcggcttcat
     8701 aggcgtggat cgctcggagg ccgagggcca ggtcgccgag agtgcgcatc tgctcgaccc
     8761 ggtcagcggt caggcagaag gctcggtagt gcgcctgcag tgcttccagc ggcagtccca
     8821 gcgcgccgta cacgacgccg agatccgagg aggccagcgc ctgagcctcg gccaggccga
     8881 gtgcggtagc ttcccgcaac acactctccg caatctctcg agccgccggg tagttgccct
     8941 gcccgcggtg taccgcaccc ctgcccagcc gcccccgcag catagacatc ggttcgccta
     9001 gacgagcggc gcactcttcc gcagccgcgt agcactcctt ggcgccatcc caacgggcga
     9061 gctggcggtt gaggcgcgcc gcgaacagcg cataggcggt aaagtcggat ggcgtagtgt
     9121 cggagccctg cgcccgggcg gccaaggtca gcatctcgag gctctcctcg agccgagctt
     9181 cgtgttcgag gaagtaggcg taggcggtga ggctcatcca gaggcttggt gtgcgttggc
     9241 catcctgagg aatggcctgg acaacaccga gcagatgagc ggtttcgggt gcattggccg
     9301 gcaactcgct caggtgtcgg cgcactgcct cgagttgcca gtgaaagctc tgcatcccgg
     9361 ccgggtcgag atccagggtc aacaatcggt ccaccagacg cgctacgaca taggcagcca
     9421 aggccaggcg ggctgaccca tcgtgctctt gctcgcgctg gagccgagct cgctccagga
     9481 acggctcatg gccaagaacg tcggttgacg aacctacctc accgaagagc cgctgaggcg
     9541 tatacaaggc gcgtccttcc gtttactaca gggagtgcgg gggtacagct agtatcgcgg
     9601 ccggagccga cagacacaag ggccaggcct tgcatcctca gccaggcccg ccgtttgccg
     9661 ccgcaactcg cacaaaaaag gtgccgaccc gtccatctgg tagcctatcc tgcagcatgc
     9721 gcaggggtgt cacgctggta gagctcatgc tggttcttgc agtcgccggc attctgttcg
     9781 gggtggccgt gcccgcgctc tcgctcctgc tggatagtct cgctgtccac gcagcaatat
     9841 cccacatcga agccgcgcac gcacgcgcac ggctcttggc aatcacccgg ggtaaggtca
     9901 tcactctggc aatcgattcc gcacgcattg ccatcagtcc acggaatgac acccttgctc
     9961 tatggtcgga ggcggggccg agcgctcagc gggtccatct cgaaggagcc cagcgtcagt
    10021 tcaccttctc acccgagggg ttcacgctgg gagtttccaa tgcctccctc cagctctccc
    10081 gaggagccac tcgccaaacc cttgtcatct ccaggttggg aagagttcgg gtgctgcctt
    10141 gaaggccgaa cgattagagg gcgatggccc ctcgatgcgg tcggccggcc cggaggccgc
    10201 tacggctccg ggccactcgc atcatgctgg cgtgagagca atcaggcctc caagccatat
    10261 tttctgacct tgttcagcaa tgtagaacga gagatgccca gcagcagcgc tgccttgcgc
    10321 ttgttgccgg aggtgtgccg cagaaccaac gcaaggtggc ggcgttcggc gtcctcgagt
    10381 gaatcgggct ccggatccct tcggggaaac agtgcccgac ggagtgaggc gatgtccagc
    10441 tcgggccagg tgaggtcgag cactaacctg tcgaactccc cgccggccag agcctcggcc
    10501 acgtgctcgg tattcagtgc ggtaacgact cggtgacccg ctccccgcaa aatttcccgg
    10561 agcccggatt ggtcggagtc gttccgctcc agcagcagaa tgtgcagcgg actcatggtt
    10621 gaaattaaag aggctggtgg ccctgagtgg ctgcggccag gacacgcact ctatgtgtca
    10681 taccagaaaa acggaacggc cgtctagtcg tggctagacg gccgtccccc gcacggacta
    10741 cccaaggtcg gagcattgct gctgccgttc ttctcccacc tgccaccgct tggctgattc
    10801 gcctttcggg agggcaaggt gcggccttgg cttctatccc cagaccggat ggccatcctg
    10861 cctggttcgt ctatgggagc gctgcgagtc ggatcgggtc gcggaccgac cgttcgcact
    10921 gcaccccgag gcgctagatc ggggtgggtg aagcacgcga ctggcttcac ctgtccgagc
    10981 cggagtgatc accaggatca acgaatgcct gagcccttgg ttgcgtcggc actctcccct
    11041 gatatcccgc acggacccgc ttccaggccg ccacttcgac gcggagtctc ggtgcgtatc
    11101 ctgtaaacgt gtggcactaa aataggcacc agcgatgaac tcgcaagtgc ccttgtttct
    11161 tcgggttacg cgattgcggc gtggagcgat tgtggatatc taaactatac gctgaaacgg
    11221 tcctaccatc cttcgtcaac aaaatgtgga catgtgaatc cacatcttat cccgatgccg
    11281 gccggccccc tgcccccggt ggaaccaccc gaatgcccat gaccccatag aaatcgtgca
    11341 gcgtctgttc gtagctgcga agcgcttccc gtacctgatc cgcgcgagcg ttcgcatatc
    11401 cacgcactgt ctctgactgc ccgggacggc tcatggccgc aaactccgat tcacagcggc
    11461 ccaacgcaac cttcaaccgg tcgagggcga gcacaagatc tttctggtgc ttgagacgtt
    11521 tggcctggga gttcttggtg gccaggacgg cgtcgcgggt ggcgggaacc atttgaatcg
    11581 aatgggcaca cgcctcttgc atcatccgag cgcgagagag gagtacgggc cccgatgcct
    11641 ggctgttgtc gcgctgcagc cgggcggcgg ccgcgccgat ggtgcccaga gtatcgctga
    11701 acagcaccag cgcatcgcgc actaccactc gcgccgagtc gagcggagct gcagggtgga
    11761 caatcgtctg agcggaaaga ggggatgtgc cggccagaag caaggccacg aacgagagcg
    11821 cccgcattta cgactccatt ccgacttcga tgtaccggta ggtcggctcg ccttccagcg
    11881 aggaaaagag acctccggca gaagaggccg cgaaccagcc ggccaccagt ggtcgaggca
    11941 ggtccagctc gtgaatgatg ggcccgagcc agcggcggag gtggcggact tcgggagctc
    12001 tgcgcccgag taacgccagc aaggcgccgg cgcccgccgt cgcccggagg aagtgagcca
    12061 acccatgagc ccgctgagtg aactccacag ccttcacgcc gggctcatcg aacaggatcg
    12121 caccttcgaa cacgtccatg ggtggagcat cgaggcgagg tcccagatag acgtaccgtc
    12181 ggccatcctg cgacttgcgc tcgatgactg ctgcggcagt ctcgctggtc agacgggctg
    12241 cgtgcaagag atcatcgtcc tgaagaatgc ccaccgcccc ggtccactcc agcgccgcca
    12301 gcgccgtctc gaccgggcag cccaacgcat cgtcgaaggc gagcagccga ggcgcttctc
    12361 ccgcgcggag cacaaaatgg gaaagccctt cagctcgatc agtaaaggtg cgaacgacca
    12421 gtgtctgggg agtggacatg agagggaata tagcgtcacg ccgagactgc gatacggctc
    12481 gcgaacgcct tcgcctacgg aaccagctcc gatttgggct cgactcgaac gatccacaac
    12541 ccggagttga tgtctggtac gtagaccaga ccatctcgat agatcgcgcc ccaggcattc
    12601 ggcgcattgg gaaccactcc gctg
//
LOCUS       DASRPQ010001660         1218 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1128175, whole genome shotgun sequence.
ACCESSION   DASRPQ010001660 DASRPQ010000000
VERSION     DASRPQ010001660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1128175"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1218
                     /locus_tag="VFD73_18955"
     CDS             <1..>1218
                     /locus_tag="VFD73_18955"
                     /inference="COORDINATES: protein motif:HMM:NF025330.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HZI76055.1"
                     /translation="TDWWKLTPDNTGSYLNGTWSQLASLPPGYAPDAFASAVLADGRV
                     VIVGGEYNFNVFTLTNLGAIYDPVANTWTSLTPPSFWPFIGDPPSSVLPNGKFLVGNK
                     LNKSMGVLDPATLTWTQIPSAGKSDFNAEEGWTLMPDGTILTEDVKNAPNAEKYVLSQ
                     KQWVNAANTIVDLHSPSPFGCLPYGPGGSKCYFPPGEIGPAILRPDGTVFATGSTPQG
                     ESTAHTAIYTPGSSPTDPGSWAVGPDFPTGDEAGDSFAALLTNGNVLVEGVSGRLYEF
                     NGSTLTRGPFGFGSLMVLPTGEVIVGGSELYTSSGTFQQSWAPTIASAPSTVVRGTTY
                     QISGTQFNGLSQAASLGDEFETATNYPLVRLTNLSSGHVIYARTHGHSTMGVATGSKI
                     VSTNFDVPAAAET"
BASE COUNT          223 a          478 c          296 g          221 t
ORIGIN      
        1 tcaccgattg gtggaagctc acgcccgaca ataccggcag ctatctcaat ggcacctggt
       61 cgcagcttgc cagcctgcct cccggctacg cccctgacgc ctttgcctcc gcggttctcg
      121 ccgatggccg cgtcgtcatc gtgggcggcg aatacaactt caacgtcttc acgcttacca
      181 acctcggcgc catctacgat cccgtcgcca acacctggac ttcgctcact ccccccagct
      241 tctggccctt catcggcgac ccgccctcca gtgtgctgcc caacggaaaa ttcctggtcg
      301 gcaacaagct caacaagagc atgggtgtcc tcgatcccgc gaccctcacc tggacccaga
      361 ttccttccgc cggcaaaagc gatttcaatg cggaagaggg ctggaccctc atgcctgacg
      421 gcaccattct caccgaagat gtcaagaacg ctcccaacgc cgagaagtac gtcctctcgc
      481 agaaacagtg ggtgaacgcc gccaacacca tcgtcgatct ccactcgccc tcgcccttcg
      541 gatgcctgcc ctacggcccc ggcggcagca agtgctactt cccgcccgga gaaattggac
      601 ctgccatcct tcgtcccgac ggcaccgtct tcgccaccgg ttccactccg caaggcgaaa
      661 gcaccgctca caccgccatc tatacgcctg gctccagccc caccgatccc ggctcctggg
      721 cggttgggcc tgacttcccc accggcgatg aggccggcga ttccttcgcc gccctgctca
      781 ccaacggcaa cgttctggtc gaaggcgtca gcggccgtct ctacgaattc aacggcagca
      841 cgctcacccg cggccccttc ggcttcggaa gcctgatggt tctgccgact ggcgaagtca
      901 ttgttggcgg ctcggaactc tacacctcca gcggaacctt ccagcagtcc tgggctccga
      961 ctatcgcctc cgcgccctcg accgtggtgc gcggcaccac ctaccagatc tccggaaccc
     1021 agttcaacgg tctctctcag gccgcttccc tcggagatga atttgaaacc gccaccaact
     1081 acccgctggt ccgcctcacc aacctgtcca gcggccacgt gatctacgcc cgcacccacg
     1141 gtcacagcac catgggcgtc gccaccggct ccaaaatcgt ctccaccaac ttcgacgttc
     1201 ccgctgccgc cgagaccg
//
LOCUS       DASRPQ010001661         1152 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4589318, whole genome shotgun sequence.
ACCESSION   DASRPQ010001661 DASRPQ010000000
VERSION     DASRPQ010001661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1152
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4589318"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            447..>1152
                     /locus_tag="VFD73_18960"
     CDS             447..>1152
                     /locus_tag="VFD73_18960"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZI76056.1"
                     /translation="MSKSGQQGKSFAIRKQLVWEAYKRVKANKGAAGAGRVSMGEFEE
                     DLRGNLYKIWNRMSSGTYFPPPVKAVEIPKPHGGTRILGVPTVGDRIAQTVVALQLEA
                     RTESIFHPDSYGYRPGKSAHDALASCRERCWKGNWVVDLDIEKFFDSLDHDLVVKAVE
                     ANTGQKWVLLYVKRWLKAPLQMPDGTLRERDRGTPQGSAVSPVLANLFLHYAMDSWLE
                     REFPAVKFERYADDAVL"
BASE COUNT          222 a          276 c          433 g          221 t
ORIGIN      
        1 tgagcgatga ggaaaaggcg tcgtgagagg cgtcaggtgg gggacaggaa ggcgaacgta
       61 agtgaaccgc tgaagatgtg tcgttaatta aaagtggcat cagaaccggg gtattatcgt
      121 ggtcccggga tgagcctggc gggtgccccg tttactggcc gggcggtgcc cggcatgaag
      181 gcggcgcgag cctgttctgc ggcttctgca cggaacgtgg gaaggcgggt tccggtaacg
      241 gcgtctgctg gctggttttt gcggcgggcg gcgtgaggga gagcgcttgg cgacagaaat
      301 cgtgaggcgc ggagtaccgg tgcggaactc gctggcggac cggctcgtag tagtgatgat
      361 gcctctgtaa tggaggcgga gcgaaggggc cggctcattt aggtttgctc tcgcgagcaa
      421 ccaggcgatg tcctgggagg agacgggtga gcaagtcagg tcagcagggc aagtcgtttg
      481 cgatacgaaa gcagctcgtg tgggaggcgt acaagcgggt taaggcgaat aagggtgccg
      541 ccggagcggg ccgcgtgtcg atgggggaat tcgaggagga tctgcgggga aacctgtaca
      601 agatctggaa ccggatgtct tctggcacgt atttcccgcc tccggtgaag gcggtcgaga
      661 taccgaaacc gcatggcggg acgagaatcc tgggagtgcc cactgtgggc gacagaatcg
      721 cccagacggt ggtagccctg cagctggagg cccggacaga atcgattttt catcccgatt
      781 cctacgggta ccggccggga aagtcggcgc atgacgcgct ggccagctgc cgtgagcggt
      841 gctggaaggg caactgggtg gtcgatctgg acatcgagaa gttcttcgat tccctggatc
      901 atgatctcgt cgtcaaggcg gtggaggcga acaccggcca gaaatgggtt ctgctgtatg
      961 tgaagcggtg gctgaaagcg ccgctgcaga tgcccgatgg cactttgcgg gaacgggacc
     1021 gcggcacccc tcagggttcc gcggtgtcgc ccgtgctggc taaccttttt ctgcattacg
     1081 cgatggattc gtggctggag cgggagttcc cggctgtgaa attcgagcgt tacgcagatg
     1141 acgcggtact cc
//
LOCUS       DASRPQ010001662         1875 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2737964, whole genome shotgun sequence.
ACCESSION   DASRPQ010001662 DASRPQ010000000
VERSION     DASRPQ010001662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2737964"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..729
                     /locus_tag="VFD73_18965"
     CDS             <1..729
                     /locus_tag="VFD73_18965"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HZI76057.1"
                     /translation="FTPEARLFQGPSLLPTHLVLEHYRALFTQRNFWIPIRNSLIVAG
                     TTTVFCVVVGAFCAYALARLEFRGKIPLLGLILAVGMFPQISVVSPLYMLLRSLHLIN
                     TYPGLVLPYLTFAMPLTVWLLVGFFRQLPAELEEAAMVDGASRLRAFGEVIIPLALPG
                     LATTAILTFVYSWNEFLFALSFTLGPERQTVPVAIALFRGMYQVPWGQILAAAVVATA
                     PVTLLVLAFQRRIVQGLTAGAVKG"
     gene            733..1758
                     /gene="ugpC"
                     /locus_tag="VFD73_18970"
     CDS             733..1758
                     /gene="ugpC"
                     /locus_tag="VFD73_18970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016292962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HZI76058.1"
                     /translation="MASVQLERVQKTYPNGHVAAQGLDLEIPDGEFMVLVGPSGCGKS
                     TALRMIAGLETPTGGRILIGDRDVTTLPPQDRDIAMVFQTYALYPHMTVRENLAFGLR
                     MRGVARETIERRVDEAARALALEPVLERKPAQLSGGQRQRVALGRAIVREPRVFLFDE
                     PLSNLDAKLRVETRAELARLHRRLRATVVYVTHDQEEAMTLGSRVAVMRDGLLQQVAP
                     PMELYRKPANQFVAGFVGSPAMNFLPREEVPRSLGTRGAMLGIRPHDISIVAPGSGDE
                     DAWVELVESRGSELLVYLCLRGNDQGPAVRVVAPPETPGQPERTVGLRFDREKLHWFD
                     EKGRRVG"
BASE COUNT          331 a          558 c          630 g          356 t
ORIGIN      
        1 ttcactcccg aggcacggct gtttcagggt ccgtcactgc ttccgacaca tctcgtactg
       61 gagcattacc gtgcgttgtt cacccagcgg aacttctgga ttccaatccg gaactcgctc
      121 atcgtggcgg gcacgaccac cgtgttctgt gtagtggttg gggcgttctg cgcctacgcc
      181 ctggctcggc tggagtttcg cggcaagatc ccgctgctgg gactcatcct tgcggtcggc
      241 atgtttcctc agatctccgt ggtctcgcca ctctacatgc tgcttcgctc cttgcacctg
      301 atcaacacct atcccggtct ggtgctgccc tatctcacct ttgccatgcc gctgacagta
      361 tggctcctgg tgggattctt ccgccaactc ccagccgagc tggaagaggc tgcgatggtg
      421 gatggtgcca gccggctgcg cgcgttcggc gaggtgatca ttccgctggc ccttccagga
      481 ctcgcaacca cggcgatcct gacgttcgtg tacagctgga acgagtttct cttcgcgctc
      541 tcgtttacgc tggggccgga acggcagacc gtcccggtgg ccatcgcgct gttccggggg
      601 atgtatcagg tcccgtgggg gcagatcctt gccgcagccg tagttgcaac agcgccagtg
      661 acactgctgg tgctcgcctt ccagcggcgc atcgtgcagg gtctcactgc cggcgcggtg
      721 aaaggctagc ccatggcctc ggtccaactg gagcgggtgc agaagaccta tcccaacggt
      781 cacgtcgccg cgcagggatt ggacctcgag attcccgacg gtgagttcat ggtgctggtg
      841 ggcccgtcgg gatgcggaaa aagcacggcg ctccggatga tagcaggact ggagactccg
      901 accggcgggc ggatcctgat tggcgaccgg gacgtgacga cattaccgcc gcaggatcgc
      961 gatatcgcca tggtgttcca gacctacgcg ctgtaccccc acatgacggt gcgggaaaac
     1021 cttgccttcg gtctcagaat gcgcggagtc gccagggaaa cgatcgagcg gcgggttgat
     1081 gaagctgcca gagcactcgc cctcgagccg gtgttagagc ggaagccggc gcagctctcc
     1141 ggcggtcagc gccagcgagt ggcactgggc cgcgccattg tacgggagcc aagggtgttt
     1201 ctgttcgacg aaccgctctc caatctggac gcgaaactca gagtggagac ccgcgcggag
     1261 ctggcgcgac tgcatcgaag gctccgcgca acggtggtct atgtgacgca tgatcaggaa
     1321 gaggcgatga ccctgggaag ccgcgtggcg gtgatgcgcg atgggctgct tcagcaggta
     1381 gcgccgccga tggagctgta tcgaaagccg gccaaccagt tcgtcgccgg gttcgtcggc
     1441 tcgccggcga tgaattttct cccgcgggaa gaggtcccgc gttcgctggg taccagggga
     1501 gcgatgctcg gaatccggcc acacgacatc tcgatcgtgg caccgggcag cggagacgag
     1561 gacgcctggg tcgaactggt cgagtctcgg ggaagcgagc tcctggtgta tctctgtcta
     1621 cgcggcaacg accagggccc agcggttcgg gtcgtggcac caccggaaac tccgggccaa
     1681 ccagagcgca cagtgggact tcgcttcgat cgggagaagc tgcactggtt tgacgagaag
     1741 ggcaggcgcg tcgggtagag ggcggagagg gcggagaaga cggagaggac ggagaggacg
     1801 gaaggaccga gaggttcgcg atttcaggca cctggtccgg cctctaaggt accgcagcaa
     1861 aacttaatgt cgcta
//
LOCUS       DASRPQ010001663         4727 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_820002, whole genome shotgun sequence.
ACCESSION   DASRPQ010001663 DASRPQ010000000
VERSION     DASRPQ010001663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4727
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_820002"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(202..1071)
                     /locus_tag="VFD73_18975"
     CDS             complement(202..1071)
                     /locus_tag="VFD73_18975"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI76059.1"
                     /translation="MAEEWLGGLRNQLQEIAVRVDAAAGPERDAVKREIVTLFKRVDA
                     ALTGLAEIKEEIRALVDRYKQAGSAAEASAAPQFNGARPAVHADHLGASTYIEKGWSL
                     ISLGDYSGATQALDRALSLSPGAIDATSLMGWAQMLNEDYDDALGNFSKVLMKEPANA
                     LARINVGYICLKKGIFGEAIEHLSKAIRLDNDRKATLYAHYYLGLVYLEREMYEDAQT
                     FLRKTLKLGPNLIEAYFELGRALWLGGEREEAVQVWTAGYKANKFNPWAKRCQEMLDV
                     AAAGGEVPRSPLA"
     gene            complement(1071..1532)
                     /locus_tag="VFD73_18980"
     CDS             complement(1071..1532)
                     /locus_tag="VFD73_18980"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HZI76060.1"
                     /translation="MTGDDVQLVTFRVGRQEFAFDILQVERILRYSAPSPLPNAPGFL
                     EGVLPYGDGTVPVIDLRKRFELEAAIREETRLMVLELEGQRIAVLVDEVVEVLRVEST
                     SISAPSPFVSGLAAVYISGIVTRGGRPLIILNARKLLSSSERLSLSELGAA"
     gene            complement(1522..1962)
                     /locus_tag="VFD73_18985"
     CDS             complement(1522..1962)
                     /locus_tag="VFD73_18985"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HZI76061.1"
                     /translation="MNQRGSGFLLVRAGGRSVGLDLAQVVEVAYLAGVRAVPSMEPSV
                     RGVVAIHGRLVPMVHLGSLLEGLAHPAEMETTGVVVIVEGKRVCLEVEAAEIMVREPA
                     LPMPAGETLPWAVGVARYNGELVPLLDLSALSSRLVEALHNDDR"
     gene            complement(1959..3035)
                     /gene="cheB"
                     /locus_tag="VFD73_18990"
     CDS             complement(1959..3035)
                     /gene="cheB"
                     /locus_tag="VFD73_18990"
                     /EC_number="3.1.1.61"
                     /inference="COORDINATES: protein motif:HMM:NF001965.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis-specific protein-glutamate
                     methyltransferase CheB"
                     /protein_id="HZI76062.1"
                     /translation="MAPSTSDLGRVLVVDDSAFFRRLLTDVVDGSGEFQVIATARDGM
                     DAVRKVRAFTPDLVLMDLEMPELDGLGAISSIMAESPRPIVVVSAHAGAGVGAAIRAL
                     ELGAVDLVQKEEERGAAASARFAERLIAVLRTARSADTKRLARRESSDGAVRAPVLDH
                     PSGEAMLCVAIAASTGGPRALAEIVPLLPVGQGAAVVIVQHMPPKFTRSLAERLGSRS
                     RLKVVEAQDGMPLLADTAFVAPGDYHMKVSGPPGATRLVLDQGPAVWGVRPAADPLFR
                     SVAARFGSRAVGVVLTGIGRDGAEGLREIRNAGGIGLAQDRETATIYGMPSAAVQAGG
                     VVEVLPISRIAARIAAELSQLGSR"
     gene            complement(3016..3504)
                     /locus_tag="VFD73_18995"
     CDS             complement(3016..3504)
                     /locus_tag="VFD73_18995"
                     /inference="COORDINATES: protein motif:HMM:NF015908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheD"
                     /protein_id="HZI76063.1"
                     /translation="MSGRELVVRVADLRIGVADDVLVTVGLGSCVAIALYDAEARVGG
                     LAHTLLPSPAVARADSNPAKFPQSAVPRLLELMVADGAASGRITARLAGGASMFAALA
                     PPGTIHMGERNLLAARQALVAHGIPLVGESVGGDFGRTVRLRVGNGQMEIRTVSHGTQ
                     HI"
     gene            complement(3501..4322)
                     /locus_tag="VFD73_19000"
     CDS             complement(3501..4322)
                     /locus_tag="VFD73_19000"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008983 - protein-glutamate
                     O-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HZI76064.1"
                     /translation="MSSAEDAAFAALAAKIAGDGRLPIEAYKDKCLRRRIGVRMRACG
                     VQTYAEYHTVLDRNPAELERLRDAITINVTRFYRNPETWDLLRETVLREICAAGRPEI
                     RAWSAGCSSGEEPYTLAMVIADCLESQGMGQRLSIVTIDGTDIDRECLAQAQTARYPV
                     DTLAEVPDGFIQRYFEREGDVCRVAERVRRRVNLRASDMVNDPPPRRNYDLILCRNVV
                     IYFGRATQERLFSVFAEALAPGGFLVLGKVETLFGPAREQLTLLDPRERVYRRAA"
     gene            complement(4319..>4727)
                     /locus_tag="VFD73_19005"
     CDS             complement(4319..>4727)
                     /locus_tag="VFD73_19005"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI76065.1"
                     /translation="TENALRIARDGVAAYPNNPVLQNNLAVLLEVTGDVQGAETLLRA
                     ALSEDAALPQVSKNLGDILYRNGRYDEAAEAYERAAKLNPELGDDLYFKLGNIAYKRR
                     DHARARASWAQATSLNPGHQLARANLEMLELSQ"
BASE COUNT          866 a         1614 c         1444 g          803 t
ORIGIN      
        1 ccggaaccag aatgagttcg agaggaccag gtgagcggcg gcccaaaccg ggccagtcgg
       61 aaggctggtt agcgcggcgg gcaagctcgg tggccagctg aacttgccct ggccaggcca
      121 cggcggtcac ctgccctacc cgcaccgcga ccggcgactg ggcgagcgcg acagaagcgc
      181 aggcgaatgt actccagagg atcaggcgag cggactgcgc gggacttcac ctccagcggc
      241 cgccacgtcc agcatctctt ggcaacgctt ggcccagggg ttgaacttgt ttgccttgta
      301 cccggcggtc cacacctgca ccgcttcttc ccgctcgccg ccgagccaga gtgctcgacc
      361 caattcgaaa tacgcctcga tcaggttggg cccgagcttg agtgtcttgc gcagaaaggt
      421 ttgcgcgtct tcgtacatct cccgctccag gtacaccaat ccaagatagt agtgcgcgta
      481 gagcgttgcc tttcgatcat tatcgaggcg aatggccttg gagaggtgct cgatggcctc
      541 gccgaaaatt cctttcttga gacaaatgta ccccacattg atccgggcaa gcgcgttggc
      601 cggctctttc atcagcacct tggagaagtt ccccagggca tcgtcgtaat cttcgttaag
      661 catttgagcc cagcccatca gggaagtcgc gtcaatggcg cccggcgaca ggctgagagc
      721 gcggtccagc gcctgagtgg caccgctgta atcgcccagg gaaatcagac tccagccttt
      781 ttctatataa gtagaagcac ccaggtgatc ggcgtggact gccggccggg caccattgaa
      841 ctggggagct gcgctcgcct cggcggcgct gccggcctgc ttgtagcggt ccaccagcgc
      901 ccggatttcc tccttgattt cggccaggcc ggtcagcgcg gcatcgaccc gcttgaagag
      961 ggtgacgatt tcccgcttta ccgcatcgcg ttccgggccg gctgcggcat ccacccggac
     1021 cgcgatctcc tgcagttgat tgcgaagccc gccaagccat tcttcggcca tcaggcggct
     1081 cccagctcgc tcaagctcag acgctcgctc gaggagagga gctttctcgc gttcagaatg
     1141 atgaggggcc ggccaccccg ggtcacgatg ccggagatgt acaccgccgc aagcccgctg
     1201 acgaaaggag atggagcgct gatggaggta ctctcgaccc gcagtacctc taccacctca
     1261 tccaccagca ccgcgatgcg ctggccctcg agctccagga ccatgagccg cgtctcttcg
     1321 cggatcgctg cctccaattc gaaccgcttg cgcaggtcga tgacggggac ggtgccatcg
     1381 ccgtacggca atacgccttc aaggaagccc ggcgcattgg gcagcggcga gggcgccgag
     1441 tagcggagga tgcgttccac ctggaggata tcgaacgcga actcctgcct gccgacccgg
     1501 aatgtgacca gctgaacgtc gtcacctgtc atcattgtga agcgcctcca ccaagcgtga
     1561 gctgagtgct gaaagatcca ggagaggcac cagctctccg ttatagcggg caaccccgac
     1621 ggcccagggc agcgtctcgc cggcaggcat cggcaatgcc ggttcccgca ccatgatctc
     1681 ggccgcttcc acttccaggc atacccgctt gccctctact atcacgacca cgccagtcgt
     1741 ttccatctcg gccgggtggg ccagtccctc gagcagggac ccgagatgca ccatgggcac
     1801 caaacggccg tggatggcaa cgacaccgcg aaccgacggc tccatgctgg gtaccgctcg
     1861 tactccggcc aagtaggcca cctcgacgac ctgggcgaga tccaggccga ccgagcggcc
     1921 acctgcccgc accaggagga agccggagcc gcgctggttc accgggagcc cagctgagaa
     1981 agctccgcag caatccgcgc cgcgatacga gaaatcggca ggacctcgac gaccccacct
     2041 gcctgcactg ccgccgacgg catgccatag atggtggcgg tctcccgatc ctgagccaga
     2101 ccgatgccac cggcattacg gatctctctc aatccttccg ctccgtctcg tccgatcccg
     2161 gtaagcacca cgccaacggc gcgggacccg aatcgggcag caacgctccg gaagagcgga
     2221 tcggctgccg gccgtactcc ccacactgca ggcccttgat cgagtaccag gcgagtggca
     2281 ccgggcgggc cactcacttt catgtggtaa tcgcccgggg cgacgaaggc cgtgtcggcc
     2341 aggagcggca tgccgtcctg cgcctcgacc accttcagcc ggctacgcga tcccaaccgc
     2401 tcggccagac tgcgagtgaa cttgggcggc atgtgctgca cgatgacaac ggctgccccc
     2461 tgccccactg gcagcagtgg aacaatctcg gctaacgctc ttggcccacc ggtggacgcg
     2521 gcaatcgcca cacagagcat tgcttcgccc gagggatgat cgagcaccgg cgcacgcacg
     2581 gctccgtcgc tcgactcccg ccgggccagg cgtttggtat cggcggaacg agcggtgcgt
     2641 aatacggcaa tcaaccgctc cgcgaatcgc gcactggcgg ccgcaccgcg ttcctcttcc
     2701 ttctgcacca gatccaccgc ccccagctcg agtgcacgga tggcggcgcc cactccggcc
     2761 ccggcatgag cgctgacgac cacgatcggg cgtggcgatt cagccatgat gctgctgata
     2821 gcgccgagcc cgtcgagctc cggcatctcc agatccatga gcacgagatc cggagtgaat
     2881 gcacgcacct tgcggacggc atccattccg tcccgcgcgg tcgcgatcac ctggaactcg
     2941 cccgacccgt ccacgacatc ggtcaacagg cggcggaaga acgcgctgtc gtccactacc
     3001 agcacccggc cgagatcaga tgtgctgggt gccatgagac acggtcctga tttccatttg
     3061 gccattgccc acacggaggc gcaccgtccg gccgaagtct cctcctacgg actctccaac
     3121 gagcgggatg ccgtgcgcca ccagggcctg tcgcgcagcc agcaggttgc gttcgcccat
     3181 gtgaattgtt ccaggcggcg ccagcgcggc aaacatgctc gcgcctccgg ccagacgagc
     3241 ggtaatccga cccgacgccg cgccgtctgc taccatcagc tcgaggagcc ggggtactgc
     3301 tgattggggg aactttgcgg gattgctgtc ggcccgggcc accgccggcg agggcagcag
     3361 cgtatgggct aagcccccga cccgggcttc ggcatcatag agcgcaatgg cgacacagct
     3421 gcccagtccc accgtgacca ggacatcgtc tgccactccg atccggaggt cggcgacgcg
     3481 aaccaccagt tctcggccgc tcatgcagca cgccggtaca cccgctcacg cggatccagc
     3541 aaagtgagct gctcgcgtgc gggcccgaac agcgtctcca ccttgcccag caccagaaag
     3601 cctccgggtg ccagcgcttc ggcgaagacg ctgaacaatc gctcctgagt cgcccgtccg
     3661 aaataaatga ccacgttgcg acacaagatc agatcgtagt tccgacgggg cggcggatcg
     3721 ttgaccatgt cggaggcacg aaggttgact cggcgacgga cccgctcggc gactcgacaa
     3781 acgtcaccct cccgctcgaa atagcgctgg atgaaaccgt ctggtacctc agccagggta
     3841 tcgactggat agcgcgcagt ctgggcttgg gccagacatt cccgatcgat atcggtgccg
     3901 tcaatcgtca cgatgctcag tcgctggccc atgccctgcg actccaggca atcggcaatc
     3961 accatcgcga gcgtgtacgg ctcctcccca gaggagcatc cagcgctcca ggctcggatc
     4021 tccggccgcc ccgcagcgca gatctcccgc agcaccgttt cccggagcaa gtcccaggtt
     4081 tcgggattgc gatagaatcg ggtgacgttg atggtgatcg catcgcgcag acgctccagc
     4141 tccgcgggat tccgatccag tacggtgtgg tactccgcgt aagtctggac gccgcaggcc
     4201 cgcattcgaa ccccgattcg gcgccggagg catttgtcct tgtaggcctc gatgggcagc
     4261 ctcccatcac ccgcaatctt cgccgcgagt gcggcaaacg ccgcgtcctc cgccgagctc
     4321 attgagagag ctccagcatc tcgaggttcg cccgggcgag ttggtggccc gggttgaggc
     4381 tggtagcctg tgcccagctc gcccgggcac gcgcatggtc ccgccgcttg tacgcaatgt
     4441 tccccagctt gaaatagagg tcgtcgccca gctcgggatt gagcttagcg gcgcgttcgt
     4501 acgcttccgc cgcttcatcg tagcggccgt tgcggtagag gatgtctccc aggttcttgg
     4561 agacctgcgg taacgctgcg tcctccgaga gagcggcgcg gagcagcgtt tccgcaccct
     4621 gaacgtcgcc ggtgacctcg agcaagacgg cgagattgtt ctgcagcacg gggttgttgg
     4681 gataggccgc gactccgtcc cgggcgatgc ggagcgcgtt ctcggtg
//
LOCUS       DASRPQ010001664         1235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3363791, whole genome shotgun sequence.
ACCESSION   DASRPQ010001664 DASRPQ010000000
VERSION     DASRPQ010001664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3363791"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..574)
                     /locus_tag="VFD73_19010"
     CDS             complement(<1..574)
                     /locus_tag="VFD73_19010"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase/maturase family protein"
                     /protein_id="HZI76066.1"
                     /translation="MQSAETVLGVLRERGRKGLPLDELYRQLFNPQLYLLAYGRIYSN
                     DGAMTPGATQETVDGRSLGKISRIIDAVRHERYRFSPARRVCIPKKNGKPRPLGMPTW
                     PDKLLGEVVRLLLEAYYEPQFSGRSHGFRPGRGCHTALGEVARTWTGTTWFIEGDVAD
                     CFGSLDHEIMIRILAEKIHDNRFLRLMRNML"
BASE COUNT          206 a          411 c          352 g          266 t
ORIGIN      
        1 ggagcatgtt tcgcatgagc cgcaggaaac ggttatcgtg gattttctcc gccaggattc
       61 tgatcattat ctcgtggtcc aaagacccga aacaatcggc gacatcaccc tcgatgaacc
      121 aggttgtccc ggtccaggtc ctggccacct cgcccagggc ggtgtggcag ccccggccgg
      181 gccggaaccc gtgggaccgg ccggagaact gcggttcgta gtacgcctca aggagcaggc
      241 gcacgacttc gccgagcagt ttatccggcc aggtcggcat gcccagcggt ctcggcttcc
      301 cgttcttctt ggggatgcag acccgccggg cagggctgaa ccggtagcgc tcgtggcgca
      361 ccgcatcgat gatgcggctg atcttgccca aggacctgcc gtccacggtc tcctgcgtgg
      421 ccccgggcgt catcgctccg tcgttggagt agatccgccc gtaggccagc agatacaact
      481 gcgggttaaa caactgccgg tacagctcat ccagcggcag tcccttcctg ccgcgctcac
      541 ggaggacacc aagcacggtc tcggcgcttt gcatttcgca tacccttccg tctccggtgt
      601 ccggtcacct gttccccttc gccctgcagg cggctttccc gcctcccttg gcggggcgtt
      661 actcccgcga ctactacggg aactccgtcg ccataggact cgcgtccctt aggcgatccc
      721 gcgttcatct tcgtcatacg tgatagcgcg acttaggcgg cccactcatc tcctttaatg
      781 tcctcgctgg acatcgcccc gtatccggag agtgcaccgg cctccggacg agaccggtgc
      841 aggatacggc gccggctccg ggtatctttc cggcgggcgg gcagttgcac catctggaga
      901 ttaggcttca ggcagtttag ctttcaccat atcgcgcggg tctcccggcg caccgtccct
      961 gatacctgga cccggccgcc ggtttcctgt catgctcttt tccccttaac ctttcggtgc
     1021 caggtaagac atcagaccca aggaaatccc tccaatcctt cccggctaag ccggggatat
     1081 gacgaagcgc ctcgcggcgc actccgaatc tgccgatgac cgggcgttgc gatcttgtat
     1141 tcttatgcac tgatgtgtgt tgccaattta gacagcgatc gttaattcag cctcgtcgtt
     1201 catattggcg gcgcgccgaa cagatcgccg gatat
//
LOCUS       DASRPQ010001665         1193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1468166, whole genome shotgun sequence.
ACCESSION   DASRPQ010001665 DASRPQ010000000
VERSION     DASRPQ010001665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1468166"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..230
                     /locus_tag="VFD73_19015"
     CDS             <1..230
                     /locus_tag="VFD73_19015"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CorA family divalent cation transporter"
                     /protein_id="HZI76067.1"
                     /translation="LETNLTIQGNRLNVTTKKVTGWAAIIAVPTLITGYFGMNVPYPG
                     FGGKAGFAASVVTIVLTGLVLYLVFKRKDWL"
     gene            complement(310..777)
                     /locus_tag="VFD73_19020"
     CDS             complement(310..777)
                     /locus_tag="VFD73_19020"
                     /inference="COORDINATES: protein motif:HMM:NF017970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1003 domain-containing protein"
                     /protein_id="HZI76068.1"
                     /translation="MTKPDPSTDGSQTNAESNRLIALPVKFPHHPVVLEEQERRAADI
                     QLRIADWITGFAGSMNFVYLHVALFAVWMLFIEKSPWPTLTLIVSLEAIFLSTFVMIG
                     QNRQASFQQAKADHDFNEQELELKTNTELTREIHRLTTELHRRLIDHRGQQEK"
BASE COUNT          204 a          386 c          372 g          231 t
ORIGIN      
        1 tcttggagac caacctgact atccagggca accggctgaa cgtcaccacc aagaaggtca
       61 ccggctgggc cgcgatcatc gccgtcccca cgctcatcac cggctacttc gggatgaacg
      121 tgccctaccc cgggtttggc gggaaagcag gcttcgctgc ctccgttgtc accattgtcc
      181 tgaccgggct ggtgctctac ctcgtcttca aacgcaagga ctggctgtaa gaccgaagat
      241 cgcgaggctg ggcagcccgc cgcgatccac gggccgcgcc cgggcggagc cggggaccta
      301 ccgccatcgt cacttctcct gctggccgcg gtggtcgatg agccgcctgt gcagctcagt
      361 cgtgagccgg tggatctcgc gggtcagctc ggtgttggtc ttgagctcca gttcctgctc
      421 gttgaagtcg tgatccgcct tggcctgctg gaacgacgcc tgccggttct ggccgatcat
      481 gacgaacgtg gacaggaaga tcgcctccag cgacacgatc agcgtcagcg tcggccacgg
      541 gctcttctcg atgaacagca tccagaccgc gaacagcgcg acgtgcagat agacgaagtt
      601 catcgacccc gcgaaaccgg tgatccagtc cgcgatccgc agctgaatgt ccgcggcccg
      661 ccgttcctgt tcctccagga ccacagggtg gtgcgggaat ttgactggca gcgcaatcag
      721 tcggttactt tctgcgttag tctgcgagcc atctgtactc gggtctggct tggtcatccc
      781 gcacctcctt cggtacctgc ggccgctaga ggcctgcgtg gccagccagg cgtcggcgat
      841 gtgcggcggc cgcttgcctt aaactccacc ccatatggcg atgcctgaaa aagcgacggc
      901 acctttcgcg gcattgtcca gatctatggc tgcagacatt tacggaaccc gcgtatccgc
      961 agccgttcgg gattattgta ccccacctcc tggacgggtt tccaggcggc ggcgagctca
     1021 ggccggcctg gttgcccgag acgaagggca gccacatggc cgagagctga gagcctcagg
     1081 cgggggcgtg tgccgggttc atgccctgtc gttgtcctgg gcgccgccga cctggcatga
     1141 gcgcggcttg gaggttggca acttaccgcg acggtataaa cgcaccttac aag
//
LOCUS       DASRPQ010001666         1635 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1128962, whole genome shotgun sequence.
ACCESSION   DASRPQ010001666 DASRPQ010000000
VERSION     DASRPQ010001666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1635
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1128962"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..388)
                     /locus_tag="VFD73_19025"
     CDS             complement(<1..388)
                     /locus_tag="VFD73_19025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76069.1"
                     /translation="MESGRPGFNGDRRKRNFWWEQLKELLTTGDWPAALAERCGISGD
                     IALRREDVYLGRSLGSAASLRVAFASDFHAGPTTPDRMLDDAAALLRNAEPDLLLLGG
                     DFVSHRPHYVNRVAERLGDIPAQAGRF"
     gene            complement(440..1057)
                     /locus_tag="VFD73_19030"
     CDS             complement(440..1057)
                     /locus_tag="VFD73_19030"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HZI76070.1"
                     /translation="MSNDEVYATGLLNQALDPATQPAEIQEFLRTEIGMLRELIQPGM
                     RVLDVGCGTGRHLLLLGERLRLGVGVDYERSYVAQAQRRRGGAVHFVTGDATAIPLAG
                     DFDLAMCVTNTWGTMSDKIAVLDEMRRLAPAGTRLLSVYSPASVPARREWYRRLGHPV
                     SQETAEYLDTEGGFRSEHFSETRLRALVGNCTIRPVSEIGYVVTF"
     gene            complement(1076..>1635)
                     /locus_tag="VFD73_19035"
     CDS             complement(1076..>1635)
                     /locus_tag="VFD73_19035"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HZI76071.1"
                     /translation="PYLPRPDDGSGWRTWLEQDQRFVDGRPDVLTWKSEPLTNDFTIA
                     GDVVAHLFASTTGSDADWVVKLIDVFPDSVPESPRLGGYELMVNADIMRGRYWKSFSR
                     ATPIPANTVTPFTVDLHQQLYRFRRGHRIMVQVQSTWFPLYDRNPQTFVPNIFQATAS
                     DFRAQEHRVWHTSRYPSHLSVHTLP"
BASE COUNT          318 a          531 c          510 g          276 t
ORIGIN      
        1 caaagcgtcc ggcctgggcg ggaatatctc ccagccgctc ggcgacgcga ttcacatagt
       61 gcggtcggtg ggagacgaag tcgccgccga gcagcagcag atcgggctcg gcgttacgga
      121 ggagagccgc ggcgtcgtcc agcatgcgat cgggtgtggt gggaccggcg tggaagtcgc
      181 tcgcgaaggc cactcgaagc gacgccgccg acccgagcga ccgccctagg tacacgtctt
      241 cacggcggag cgcgatgtct cccgagatgc cgcaccgttc cgccagagcc gcaggccagt
      301 ccccggtagt cagcagctcc ttgagctgct cccaccagaa gttccgcttt cgccgatcgc
      361 cattgaagcc cggccgccca gattccatcc tcctaagcta agccgacgcg accggcaaat
      421 gtccgatctt gtccgcatat cagaaagtga ccacgtatcc aatctcggaa accggccgaa
      481 tggtacagtt gcccaccagt gctcgaagcc gcgtctcgga aaagtgctcg gaccgaaacc
      541 cgccctcggt atcgaggtac tccgcggttt cctgggagac agggtgcccc aaccggcggt
      601 accactcccg ccgggccggc accgaagcgg gcgaatacac cgacaggagc cgagtacccg
      661 ctggcgccag acgccgcatc tcgtcgagaa cggcgatctt gtcgctcatg gtcccccagg
      721 tattcgtgac gcacatcgcg agatcgaagt ccccggcaag cggtatggca gtggcgtctc
      781 cggtgacgaa gtggacagcg cctccccggc gacgctgcgc ctgggccaca tagctccgct
      841 cataatccac tccgacgccc agcctgagac gctcacctag cagcaacagg tgacgtccag
      901 tcccgcaccc cacatcgagc actcgcatgc cgggctgaat caactcccgg agcatgccga
      961 tctcggttcg caagaactcc tggatttcag cgggctgtgt cgcagggtca agagcctggt
     1021 tcagtaatcc ggtagcatag acctcatcgt tggacatcga ttctccagtg ccacctcagg
     1081 gcagcgtgtg caccgagaga tgcgagggat acctggatgt gtgccagacg cgatgctcct
     1141 gcgcccgaaa gtcggacgcc gttgcttgga agatgttcgg cacaaatgtc tgcggatttc
     1201 ggtcgtagag cgggaaccag gtgctctgga cctgcaccat gatgcggtgt ccccggcgaa
     1261 aacggtagag ctgctgatgc agatcaaccg taaacggcgt cacggtgttg gccgggatcg
     1321 gcgttgcccg gctgaagctc ttccagtagc ggccccgcat gatgtcggcg tttaccatca
     1381 gctcgtagcc gccgaggcga gggctctccg gcacgctgtc gggaaagaca tcgatgagct
     1441 tgaccaccca atccgcatcg ctgccggttg tgctggcgaa caggtgggcc accacgtcgc
     1501 ccgcgatggt gaagtcattg gtgagcggct ccgacttcca ggtcagcaca tccgggcgac
     1561 catccacgaa gcgctgatcc tgttccagcc aggtgcgcca gccgctgccg tcatcggggc
     1621 gagggagata gggaa
//
LOCUS       DASRPQ010001667         1522 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3011040, whole genome shotgun sequence.
ACCESSION   DASRPQ010001667 DASRPQ010000000
VERSION     DASRPQ010001667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3011040"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(83..553)
                     /locus_tag="VFD73_19040"
     CDS             complement(83..553)
                     /locus_tag="VFD73_19040"
                     /inference="COORDINATES: protein motif:HMM:NF020387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RES family NAD+ phosphorylase"
                     /protein_id="HZI76072.1"
                     /translation="MIVNAWRITKRKHARDAFTGEGAREFGGRWNNPGTAMVYTAQSQ
                     SLAALEMLVHLDSSELLAKYVLISVEFDQALIKAVDLTALPRHWRSDPPPPEVRAVSD
                     EWILAGSSPVLQVPSAVVPGESNFLLNPAHEDFPKLRFGKPLAFQFDPRLAGHR"
     gene            complement(550..1053)
                     /locus_tag="VFD73_19045"
     CDS             complement(550..1053)
                     /locus_tag="VFD73_19045"
                     /inference="COORDINATES: protein motif:HMM:TIGR02293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin Xre/MbcA/ParS toxin-binding
                     domain-containing protein"
                     /protein_id="HZI76073.1"
                     /translation="MAVGGYTLIMGHIGLDRTAGGPRPGSSRRQRLRLGGSTLGLTAA
                     SPADLVQQLERGFSFKTLQALESRSGLAVSRLADIVGIPERTLARRKVSRRLTPEESE
                     RLLRISAVFEDAVDLFEGDVAAAVNWLTTPRRALGDRTALAYARTEPGAREVENLIGR
                     LEHGIFT"
     gene            complement(1065..>1522)
                     /locus_tag="VFD73_19050"
     CDS             complement(1065..>1522)
                     /locus_tag="VFD73_19050"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HZI76074.1"
                     /translation="IRSQLDLAMESGEVSAAAASAALSRLEFAGSVEEAARQADLVIE
                     AVPEELESKIEIFTLLDKICRPGTILASHISTLSITEISRVTYRARNCVGMHFAEPVE
                     SESGLEIIRSQETDEVTVAVAVEVGRRMGKETLVLQDPWARSEGLPLGS"
BASE COUNT          314 a          490 c          435 g          283 t
ORIGIN      
        1 ggaagtccaa gtcaaaaaca acgtcaaagg cagcggacaa gagtgtccga cccacacctc
       61 cagggacaag atgcccccag ccttatctgt ggccggccaa tcgaggatcg aattgaaacg
      121 ccaggggttt gccgaagcgc agcttgggaa aatcctcatg cgcaggattc agcaggaaat
      181 tgctttctcc cggaaccacg gcactcggca cctgcagcac cggtgaactt ccggcaagaa
      241 tccactcatc gctgacagct cgaacttccg gcggcggagg atctgacctc cagtgcctgg
      301 gcagcgctgt gaggtcaacc gccttgatca gcgcctggtc gaactccaca ctgatcagta
      361 cgtactttgc caacagttcc gaggaatcaa gatgcaccag catctccagg gccgccagag
      421 attgtgactg agcggtgtaa accatggcgg ttccaggatt gttccagcgg ccgccaaact
      481 cccgcgctcc ctccccggta aaggcatccc tggcgtgttt tcgtttcgtg atgcgccaag
      541 cgttgacgat cacgtaaaga ttccgtgctc cagccgtccg atcaggtttt cgacctcccg
      601 ggctccgggc tcggtgcgag cataggccag cgcggtccga tcgccgagcg ccctgcgggg
      661 agtggtcaac cagttcacgg ccgcggccac gtcgccttca aatagatcca ccgcgtcttc
      721 gaatacggcg gagatgcgaa gcaggcgctc cgattcttcc ggagtcaatc ttcgtgaaac
      781 cttgcgtcgg gccagggtcc gctccggaat tccgacaata tccgccagcc gcgacacggc
      841 cagaccgctg cgcgattcaa gcgcctgcag ggtcttgaag gagaaccctc gctccagctg
      901 ttgaaccagg tcggcggggc tcgccgcggt caggccaagg gtgctgccgc ccagccggag
      961 gcgttgccgg cgcgacgagc ctggccgagg cccgcccgct gtccggtcta atccaatatg
     1021 gcccatgatc agagtgtagc ctccgactgc cacattgtca ataattaact gccaagtggc
     1081 agaccctcgg atctcgccca ggggtcctgc aataccaggg tttctttgcc catgcgtcgt
     1141 ccaacctcca ccgcgaccgc aaccgtgacc tcatcggtct cctggctgcg gatgatctcc
     1201 agtccactct cgctctccac cggttccgca aaatgcatgc ccacacaatt ccgggcgcga
     1261 taagtaacgc gggaaatctc ggtaatgctc agcgtggaaa tgtgagaagc caggatggtg
     1321 ccggggcggc aaattttatc gagcagggta aagatttcga tcttcgattc cagttcttcc
     1381 gggacggcct cgatcaccag gtcagcctgg cgtgcggcct cttcgacgct gcccgcaaat
     1441 tccagacggg agagcgcggc actggcggcg gcggccgaaa cctcgcccga ctccatcgcc
     1501 aaatcaagct gactacggat gt
//
LOCUS       DASRPQ010001668         1098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1129294, whole genome shotgun sequence.
ACCESSION   DASRPQ010001668 DASRPQ010000000
VERSION     DASRPQ010001668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1129294"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            157..>1098
                     /locus_tag="VFD73_19055"
     CDS             157..>1098
                     /locus_tag="VFD73_19055"
                     /inference="COORDINATES: protein motif:HMM:NF033592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZI76075.1"
                     /translation="MDFTRQRTLPFPVVVLFLLNLIKGALQRELDEFFQVLHGTDLAD
                     RVVTKSAFCAARQKLKPSAFIELNRHLVRRWYHDAPIRRWHGLDVRAVDGSTLRLPDT
                     PDAIASFGQMFPAHSDPVTLARISQLYDPLNGLILDALIAPYHRDERDLLFEHLAALE
                     AGCLLLLDMGYPAFWVFAALQARKIAWCARVALDTWSVVRDFLAAGQDDAVVTLHPRG
                     EALADCRARGVPTTPIRVRLIRVLLPTGDVEVLMTSLLDADDCPAEQFADLYHLRWSQ
                     EECYKCFKCRVEVENWSGKSALTICQDFHAKVLALNLT"
BASE COUNT          183 a          369 c          333 g          213 t
ORIGIN      
        1 ggaaggctca tcaaacggag gtcaacgtga gtggacagcg gtgttctatg gcagacatga
       61 tcggggaatc ttcaggacat agactgtaac accattcgat tgctgcgtga cctcatcaac
      121 gatcctgcgt tcattgccag acatcgacgt tccgatatag acttcacccg gcagcgcacc
      181 ctgccgtttc ccgttgtagt tctcttcctg ctgaacctga tcaaaggcgc gctgcagcgg
      241 gaattggacg agttctttca ggtcctgcac ggaaccgacc tggccgaccg ggtggtcacc
      301 aagagcgcgt tctgcgccgc ccgtcagaag ctgaaaccca gcgcgttcat tgaactgaac
      361 cgccatctcg tgcggcgctg gtaccatgat gctccaatcc ggcgctggca tggtcttgac
      421 gtgcgcgccg tcgacggatc gaccctgcgc ctgcccgaca cgccggacgc catcgccagc
      481 ttcggccaga tgttcccggc gcacagcgat ccggtgaccc tggcgcggat ctcccagctc
      541 tacgacccgc tcaacggcct gatcctcgac gcgctcatcg ctccgtatca ccgggacgag
      601 cgggatcttc tgttcgagca cctcgccgcc ctcgaggcgg gctgcctgct gctgctcgat
      661 atgggttacc cggcgttctg ggtgttcgcc gccttgcagg cgcgcaagat cgcctggtgt
      721 gcccgggtcg cgctcgacac ctggtcggtg gtccgggact ttctggccgc cggccaggac
      781 gacgctgtgg tcacgctcca cccccgcggc gaggctctgg cggactgccg ggcccgcggg
      841 gtgcccacga ccccgatccg ggtgcgcctg atccgggtcc tgctgcccac cggcgacgtc
      901 gaggtgctga tgacctcctt gctcgacgcc gacgactgcc cggccgaaca gtttgccgac
      961 ctgtatcatc tgcgctggtc ccaggaggaa tgctacaaat gcttcaagtg ccgggttgaa
     1021 gtggagaact ggagcggcaa gtcagccctg acgatctgcc aggacttcca cgccaaggtg
     1081 ctggccttga acctcacc
//
LOCUS       DASRPQ010001669         1154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4590365, whole genome shotgun sequence.
ACCESSION   DASRPQ010001669 DASRPQ010000000
VERSION     DASRPQ010001669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4590365"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..560
                     /locus_tag="VFD73_19060"
     CDS             <1..560
                     /locus_tag="VFD73_19060"
                     /inference="COORDINATES: protein motif:HMM:NF012432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HZI76076.1"
                     /translation="SEEFGWLELSDAVTSGSSLMPQKKNPDSLELIRGKSGRVTGCLL
                     SLLTTMKGLPMTYNRDMQEDKVPLFEAFDQVAGSLEMAREVILGAKLNPAKPAAAAKA
                     GWVVATDLAEALARGGTPFHQAHQMVGRWVLESVRTGNTPELPPELAPLLDPADGLKT
                     REVPGGRDRMPLRPRWPARDAGSRR"
     gene            565..1002
                     /gene="argR"
                     /locus_tag="VFD73_19065"
     CDS             565..1002
                     /gene="argR"
                     /locus_tag="VFD73_19065"
                     /inference="COORDINATES: protein motif:HMM:TIGR01529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006525 - arginine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HZI76077.1"
                     /translation="MTKTYRQGQILKLIRSKRIGTQEELAQELKAQGIAATQVTLSRD
                     IRDLRLVKTREGYQEMAPEETGPEFSLLAAEFLLDVLRAQNLVVLKTSPGHANSVAVA
                     LDAEKWPEVVGTIAGDDTILVIAPDNPTAEAVQEKLLGLLDRG"
BASE COUNT          213 a          317 c          436 g          188 t
ORIGIN      
        1 cgagcgagga gttcggctgg ctggaactga gcgatgcggt caccagcgga tcgagcctga
       61 tgccgcagaa aaagaatccg gactcgctgg agctgatccg gggaaaatcg gggcgggtga
      121 cgggctgcct cttgtcgctg ctgacgacca tgaagggtct gcccatgacc tacaaccgcg
      181 acatgcagga ggacaaagtc cctctgttcg aggcgtttga ccaggtggca ggttcgttgg
      241 agatggcgcg ggaggtgatt ctgggggcga agctgaatcc cgcgaaaccg gcggctgcgg
      301 ccaaggcggg atgggtggtc gcgaccgacc tcgccgaggc gctggcgcgc gggggtacgc
      361 cgttccacca ggctcaccag atggtcgggc gttgggtgct cgagagcgtg cgtaccggga
      421 acaccccgga attgccgccg gagcttgctc cgctgctcga cccggcagat ggcctgaaaa
      481 cgcgcgaggt tccgggcgga cgggaccgaa tgccgttgcg gccgcgctgg ccggcgcgag
      541 acgccggctc acggagatga aggaatgacg aagacgtatc gccagggcca gattttgaag
      601 ttgatccgga gcaaacggat cggcacgcag gaagagctgg cgcaggagtt gaaggcccag
      661 gggatcgccg caacgcaggt gacgctgtca cgcgacatcc gcgacctgcg gctggtgaag
      721 acgcgcgaag ggtaccagga gatggccccg gaggagaccg ggccggagtt ctccctgctc
      781 gcggcggagt ttctgctgga cgttttgcgc gcgcagaacc tggtggtgct gaagacctcg
      841 ccggggcatg cgaactcggt ggcggtggcg ctggacgccg agaagtggcc cgaagtggtg
      901 ggcacgattg caggagacga tacgatcctg gtaatcgccc cggacaaccc gacggccgag
      961 gcggttcagg agaagctgct ggggttgttg gaccggggct agatcgtcga gccagggcgc
     1021 gaacgcgcca aaaaattctc gcaaccgggt gaaagggtcg gccggctcgc ggcataggcc
     1081 agtcggaggc ctttatgcgt cgctggcttt cgcttttctt tcttggttcg gcggttctgc
     1141 ttgcgcagga gcat
//
LOCUS       DASRPQ010001670         3115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1789298, whole genome shotgun sequence.
ACCESSION   DASRPQ010001670 DASRPQ010000000
VERSION     DASRPQ010001670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3115
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1789298"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            593..1480
                     /locus_tag="VFD73_19070"
     CDS             593..1480
                     /locus_tag="VFD73_19070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76078.1"
                     /translation="MSRRRSLVRYLSFALSALAAVGCGDSLSTGDATLPDDGTPDIGI
                     TARDEVESALSALTLTSVIAPIGTTQAPPGTTAFTPPCVTSTTPTDSDGDGVPDDATY
                     LFTAPPCRFTGWRGGTLDIVGQLRMQDPAPTQAGFGYEATLTGLRTRFTSGDGKVIYD
                     VTRNGTRALSGSVSALSLSADLQLIRTFAGKPDAAVDQQWTTNYTPAAPLQINAPLPS
                     GTLDVTGTLDWTRGTEHYVMTVTTPTVLHYNADCTDTVQRIDGGEMRLAGKFNDIDGY
                     VQVRWTGCGNEPVFGFFRN"
     gene            complement(1494..1877)
                     /locus_tag="VFD73_19075"
     CDS             complement(1494..1877)
                     /locus_tag="VFD73_19075"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZI76079.1"
                     /translation="MASTLERLEREYISVPSVTDTAAGRRLVESNALVVNLDGGTTTG
                     ENMLRAGWSGDVVFDSLTVDSVQVRQLAPTVALVYARGYQKGHYKAKSGTKDLTGQYQ
                     VLDVWRLRNGHWRVASEMGVPVQKS"
     gene            complement(1978..2400)
                     /locus_tag="VFD73_19080"
     CDS             complement(1978..2400)
                     /locus_tag="VFD73_19080"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4440 domain-containing protein"
                     /protein_id="HZI76080.1"
                     /translation="MGGTADVNSAGLSAQDRSALEDLSKKWEQAATAGDANALSALYT
                     SDATLLPENAPAVNGDGLKTFWTGFTKSFPGVKAELHTNSIEGQGDLAYAIGTFRLTP
                     KGASKAMEGKWVTVNKKQSDGSWKMLVDIWNENAAPAR"
     gene            complement(2536..>3115)
                     /locus_tag="VFD73_19085"
     CDS             complement(2536..>3115)
                     /locus_tag="VFD73_19085"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HZI76081.1"
                     /translation="RAAAQKYSDRELAGIVRNGIRPDGHSVLVMPSEAFVGLSDQDLG
                     RIIAFLRSLPPVRGPGPGVELGPLGRMGFAIGKFKPAAQLIAETVPPPPAASKEAAFG
                     RYLARTTCPQCHGADLRGASTPAFTSPGLQVVAGYSREAFTRLLRTGVALDGRTLPMM
                     GPWARSHLSYYTDEEIADLFTYLHAMTPAQPR"
BASE COUNT          570 a         1077 c          913 g          555 t
ORIGIN      
        1 tcgtgaacgc cagcatccgc gcggcgaccg ccagcatccg cacggcaaac gccagcttcc
       61 gtatcgcaga ccaccggacc cgtatcgtaa ccgtcccggt ccacgctagg cccggccggg
      121 tccgtatccc gaatgtccgc attcgtactc cggagagcag cgtacgcgcc cccaccgtcc
      181 gggtccgcgt accgaaaccc gaatacgtaa agcgaatggc cgagtccgta acgtgaatgg
      241 ccgagtccgg atcgccactg accgactccg cacacgcaag ggccgagttc gcattcgcgg
      301 caacaaatcc tgctcggcag tcgctaacat cctcgccggc ggcgacaggt tccgcctcgt
      361 tgcgtcccgg cctgtttcga gactgaccgc ggtcgtatcg aggccgccag ctttcgctcg
      421 cgaccgaaac gtctccggaa tcgcgctacc tgaaacctcc aggcgtcggc aggtgtctat
      481 caggttcggc ccgggttatg ctcccaacat caccacccca taacccgaac ggccgggcat
      541 gcctcgccgg gtcgattcca gagtcgcagc agaacagcag gagcaggtaa agatgtcgag
      601 acgacggtcc ctggtacggt atctctcgtt tgcgctaagt gctctggcag cagtcggttg
      661 cggcgactcg ctcagcaccg gcgacgccac gctgccggac gatggcactc ccgacatcgg
      721 cattaccgcc cgggatgagg tcgaatccgc cctcagcgcc ctcaccctga ccagcgtgat
      781 cgccccgatc ggcaccactc aggcgcctcc cggcaccacc gcgttcacgc ctccctgtgt
      841 cacttcgacg acaccgaccg actcggatgg ggatggcgta cccgacgacg ccacctatct
      901 ctttaccgct cccccctgcc gcttcaccgg ctggcggggc ggtaccctcg acatcgtggg
      961 ccagctccgg atgcaggacc ccgcccccac ccaggccggc ttcggctacg aggcgaccct
     1021 taccgggctc cggacccgct tcaccagcgg cgacggcaag gtgatctacg acgtgacgcg
     1081 gaacggcacc cgggcgctca gcggctcggt ctcggcgctc agcctctcgg ccgacctcca
     1141 gctgatccgc acctttgccg ggaagcctga cgccgcggtg gaccagcagt ggaccaccaa
     1201 ctacaccccg gccgcaccgc tccagatcaa cgctccgctg ccgagcggaa cgctcgacgt
     1261 taccgggacg ctggactgga cccgcggcac ggagcactac gtcatgaccg tcaccacgcc
     1321 cacggtgctc cactacaacg ccgactgcac cgacacggtg cagcggatcg acggcggcga
     1381 gatgcggctg gccggcaagt tcaacgacat cgacggctac gtgcaggtgc gctggaccgg
     1441 gtgcggcaac gagccggtct tcggcttctt ccggaactaa tgggtctgga gccttatgac
     1501 ttctgcaccg gcacacccat ctcggatgcg acccgccagt gaccattgcg tagccgccag
     1561 acatccagga cctgatactg gccggtgagg tccttggtgc cgctctttgc cttgtaatgg
     1621 cccttctggt atccccgggc atagacgagt gccactgtcg gtgcaagctg gcgaacctgc
     1681 accgagtcca cagtcagtga atcgaacacc acgtctccag accagcctgc ccgtagcatg
     1741 ttctcaccgg tcgtcgtccc gccgtccaaa ttgaccacca gagcattgct ttcgacgagt
     1801 cgccgcccag cggcggtatc ggtaacactc ggaacgctga tgtactcccg ctcgagtcgc
     1861 tcgagtgtcg aggccacaga cgttgctttt tgttgagagg ccagcagcgt tggcaacgcg
     1921 ctaagaaaca gacaaataac cacagcggta cgcatatatt tcccctgatg tagaacctta
     1981 cctcgcgggc gctgcgttct cgttccagat atccaccagc atcttccacg atccgtcgga
     2041 ctgcttcttg ttgaccgtca cccactttcc ttccatcgcc ttgctcgcgc cctttggtgt
     2101 cagccggaat gttccgatcg cgtacgccaa atctccctga ccctcgatcg agttggtgtg
     2161 cagctcggcc tttacccccg gaaagctctt ggtaaaaccg gtccagaagg tcttgagtcc
     2221 gtctccattg accgccggag cgttctcggg aagtagcgtg gcgtcgctgg tgtagagcgc
     2281 gctgagggcg ttggcgtcac ccgctgtcgc tgcctgctcc cacttcttgc tgaggtcctc
     2341 gagggcagag cggtcctgag ccgaaagtcc ggcggagttg acgtctgccg tacctcccat
     2401 cgacgccgat tcgttgcggg gagcggggcg acatgctgca gcaaccaaga gagccgcgag
     2461 aaccaatcga gtacggtgat acatttgcgc ctccatgggg tcagaaaggt tattggacgg
     2521 cgagagctcc ccaactcagc ggggttgagc cggcgtcatg gcgtgcaggt acgtgaacag
     2581 atcggcaatt tcttcatccg tgtagtacga caggtgggac cgggcccacg gccccatcat
     2641 tggcagagtc cttccgtcaa gcgcgacccc agtccgcaag agccgagtga acgcttcccg
     2701 agaataacca gccacaacct ggaggccagg actggtgaac gcgggcgtgg aagcgccgcg
     2761 cagatctgcg ccgtggcact gcgggcaggt cgtgcgtgcg aggtaccgtc cgaaggcagc
     2821 ttctttgctg gcggcaggtg gagggggaac ggtttccgca atgagctgcg ccgccggttt
     2881 gaacttgccg atagcaaaac ccattcgccc gagcggcccc agctcgactc ctggccctgg
     2941 ccctctgacc ggcggcagac tcctgagaaa ggcgatgatg cgccccaagt cctgatcact
     3001 caaccccacg aatgcttccg atggcatgac cagaacgctg tggccgtccg gtcggatccc
     3061 attcctgacg atcccggcga gctcacggtc gctgtacttc tgcgccgcgg ccctg
//
LOCUS       DASRPQ010001671         1750 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4590467, whole genome shotgun sequence.
ACCESSION   DASRPQ010001671 DASRPQ010000000
VERSION     DASRPQ010001671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1750
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4590467"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1744)
                     /gene="nuoL"
                     /locus_tag="VFD73_19090"
     CDS             complement(<1..1744)
                     /gene="nuoL"
                     /locus_tag="VFD73_19090"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005141.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HZI76082.1"
                     /translation="MISPHWVWLSVALPLFGFLANGALALPRGPVNRRLVSLIGVGVV
                     AAAFLVSLGVFLQLWRQPTHEPVIVSLWRWLPVGPLQIDFAFQVDQLSAVMLLIVTGV
                     GSLIHLFSVGYMEDDPGYARYFSYLNLFIVFMLVLVLGSSFPVMFIGWEGVGLCSYLL
                     IGFWFNDKVNADAGKKAFIVNRIGDFGFLIAMFLLWQSLGTLTFVGVAEKAPGVFSVG
                     SGVVTAITLFLFLGCTGKSAQIPLYTWLPDAMAGPTPVSALIHAATMVTAGVYLVIRA
                     NVLFALAPLSSTVVAGIGALTALFAATIGLRQYDIKKVLAYSTVSQLGYMFLGVGTGA
                     YASGLFHLATHAFFKALLFLGSGSVIYAMHHAYHATHSHADAQDMRNMGGLKEYMPLT
                     FWLMLIATLAISGIPPFSGFFSKDEILAAAFARGQSAPVYYVFYGMAVLAAFLTAFYM
                     ARLMAMTFLGPNRTGERERAHLHDAPWVMTGPLVVLGILSAVGGVLNLPPLVGGHAAL
                     EHWIEPVTAPAAAFFRLEMPHGQTELFLVGAAVLIGVVGLIAGWRATLRRPILPADQA
                     PADTGFARVLNRKYY"
BASE COUNT          395 a          562 c          556 g          237 t
ORIGIN      
        1 catagtactt gcgattcagt acccgggcga agccggtatc ggccggcgcc tggtcggccg
       61 gcaggatggg acggcgcagg gtagcccgcc agccggcgat caatcccacg acaccaatca
      121 acaccgcggc gccaaccagg aagagctcgg tctggccatg aggcatctcc agccggaaga
      181 atgccgccgc cggagcggtg accggctcga tccagtgctc caatgccgcg tgcccgccca
      241 ccagcggcgg cagattgagc actcctccga ccgcactcag gattcccagc accacgagcg
      301 gccccgtcat tacccacggg gcgtcgtgca gatgcgcccg ctcccgttca ccggtgcgat
      361 tggggccgag gaacgtcatt gccatcaggc gagccatgta gaaagccgtg aggaacgccg
      421 cgagaacggc catgccatag aagacgtagt acaccggagc cgattggccc cgagcgaacg
      481 ccgccgccag gatttcatcc ttggagaaga atccggagaa tggcgggatg cccgagatcg
      541 ccagcgtggc gatcagcatc agccagaagg tcagcggcat gtactccttg agaccaccca
      601 tgttccgcat gtcctgcgcg tcggcatggg agtgggtggc atgatacgcg tgatgcatcg
      661 cgtagatcac gctgcccgac ccgagaaaca gaagcgcctt gaagaaggcg tgggtcgcga
      721 ggtggaagag cccggaggca tatgctcccg tgcccacgcc caggaacatg tacccgagct
      781 gggacacggt ggagtaggcc agcaccttct tgatgtcgta ctggcggagc ccgatggtcg
      841 cggcaaagag tgccgtcaat gcgccgatgc cggcgaccac ggtgctcgac agcggcgcca
      901 gcgcaaacag cacattggcc cggatcacca ggtacacgcc ggccgtcacc atcgtcgctg
      961 cgtggatgag cgcggatacc ggagtcgggc ccgccatagc gtcggggagc caggtgtaga
     1021 gtgggatctg cgccgacttg ccggtacacc cgagaaagag gaacagggtg atggcggtga
     1081 ccacgccgct gcccaccgaa aacacgcccg gggccttctc agccacgccc acaaacgtga
     1141 gggtgcccag cgactgccag aggaggaaca tcgcgatcag aaacccgaag tctccgatgc
     1201 ggtttacgat gaacgccttc ttgcccgcat cggcattgac tttgtcgttg aaccagaagc
     1261 cgatcagcag ataggagcag agtcccacgc cctcccaccc gatgaacatg accgggaagc
     1321 tcgagcccag gaccagcacc agcatgaaca cgatgaacag attgagatag gagaaatacc
     1381 gggcgtaccc cggatcatcc tccatgtacc cgacgctgaa gaggtggatc aggctgccga
     1441 cgccggtaac gatcagcaac atgacggcgg agagctgatc cacctgaaag gcgaaatcga
     1501 tctgcagtgg ccccactggg agccagcgcc acaacgacac gatgaccggc tcatgggttg
     1561 gctgtcgcca gagttgcagg aaaaccccca gcgagaccag gaaggccgcg gccaccaccc
     1621 cgaccccgat gagcgagacc agtcggcgat tgaccggccc ccgcggcagc gccagcgcgc
     1681 cattcgccag gaagccgaac agcgggagcg cgacgctaag ccagacccaa tgaggggaga
     1741 tcatcagcct
//
LOCUS       DASRPQ010001672         1054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1468752, whole genome shotgun sequence.
ACCESSION   DASRPQ010001672 DASRPQ010000000
VERSION     DASRPQ010001672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1468752"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            184..>1054
                     /locus_tag="VFD73_19095"
     CDS             184..>1054
                     /locus_tag="VFD73_19095"
                     /inference="COORDINATES: protein motif:HMM:TIGR02669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIID/LytB domain-containing protein"
                     /protein_id="HZI76083.1"
                     /translation="MRDSIGITVVNRVTLEEYLQGVVSAEMGRRSPADAAALQAQAIV
                     SRTYAMRNLGRWRTRGFDLTATVDDQVYGGLAIETPEGREAVSATRGLVLTYQGQPIE
                     AFFYSTCGGRTAQGTEVFRGAAEPYLRSVPDEAPNGTVYCSISPRYRWGEDWSGEALR
                     TTLERNLPAVTGISSDEIRQVVGVRITRRTGSGRVDQLAIDLGGKEIRVDGPAIRRVL
                     RPVTGELLRSNAFTLSADGSGRLVTHLHLDGMGAGHGVGFCQWGAVGRSRAGQGFQQI
                     LAAYFPGTTLERRY"
BASE COUNT          182 a          314 c          368 g          190 t
ORIGIN      
        1 tcacacctgg cgacgattgc cgcgggccag gtgtgggagg tttctcccag cggcccgagg
       61 ctgacgctgc acgggagcga tggctggatc tcgtctccgc tgaatgcgat ctccgtctgg
      121 tcgacctcgg ctggagctcc ggtccggatc aacgggcgcc cctatgatgg gctcatcgag
      181 ctgttgcgtg actcgattgg aatcaccgtg gtgaatcggg ttacgctgga ggaatacctt
      241 caaggggtgg tgtcggccga aatggggcgg cgaagccctg ccgatgccgc tgcacttcaa
      301 gctcaggcaa tcgtctcacg aacctatgcc atgcggaacc tcggacgctg gaggactcgt
      361 gggttcgatc ttacggcaac ggtcgacgat caggtgtacg gcgggctcgc gatcgagaca
      421 ccggagggtc gcgaggccgt cagcgcaacg cggggactcg tcctcaccta ccaggggcag
      481 ccaatagaag cgttctttta ttccacctgt ggaggtcgga cggcccaggg gacagaggtc
      541 ttccgcggag cggcagagcc ctatttgcga tcggtgccag atgaagcgcc caacggcacg
      601 gtgtactgca gcatctcgcc gcgataccgc tggggagagg attggagcgg agaggcgctg
      661 cgcaccacac tcgagcgcaa tctgccagcg gtcaccggca tctcgagcga tgaaatccgc
      721 caggtcgttg gggttcgcat cacccggcga acggggtctg gacgggttga ccaattggcg
      781 atcgacctcg gcgggaagga gatccgcgtc gacggaccgg ccattcggcg ggtgctccgc
      841 ccggtgactg gggagcttct ccgtagcaac gccttcacct tgtcggccga cggcagcggt
      901 cggctcgtca cccatctcca cctggacggg atgggagcgg gccatggcgt cgggttctgt
      961 cagtggggtg ccgtcgggcg atcgagagca gggcagggct tccaacagat tctggctgcg
     1021 tactttccgg gcaccacact ggagcgccgc tact
//
LOCUS       DASRPQ010001673         1059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1789844, whole genome shotgun sequence.
ACCESSION   DASRPQ010001673 DASRPQ010000000
VERSION     DASRPQ010001673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1789844"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            444..>1059
                     /locus_tag="VFD73_19100"
     CDS             444..>1059
                     /locus_tag="VFD73_19100"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HZI76084.1"
                     /translation="MHRALRRSLDSIIRISGQPVPERDRGDFADFIERFTKFLHSHHD
                     GEEQVIFPSLHAAAARLSMRDLLAHLASWQAAHERLLSRLQQLEDACRSFRANGEQEP
                     LLRTAREVKDLLAPHLDAEEAALSEPGLLQLMSAEQASALSQAASKHGQQHGGPMVLM
                     MYLHGLTDEEQTHFSTMPWFVRRVLVKRVWARGFRGSLKYAHNPS"
BASE COUNT          175 a          344 c          335 g          205 t
ORIGIN      
        1 cgacctggac tcccgttacc gcgtcggctg ggccctcagc gccgtcaacg accggcactg
       61 gctgccgggg acgagtcgcc tggcccatcc tgggtccgag cggcggagga ggggagcgaa
      121 gaggccaggc cgacggaggc aaatcccgtt gcagcctcgg ctcctggcga agcgaggagt
      181 acgggacttg aaggcgtctc agccctctct tctaaccttg cggcgggaca gcgtttcccc
      241 ctcaaggcct cgatgattgt tggtgatctt cttgttggct cgctctccgt gagtccacgc
      301 gagaacccct cagcttgcgc cagtcgtggc gtattcgtgg cgtgaagatc ggtcgtcgga
      361 ggggacgatg cgggttcatg tactgtggcc cgatgactcc ccagccctcg ccgcatgccc
      421 agctcttgca cggtctagcc ttggtgcatc gcgctctccg gcgcagcctg gacagcatca
      481 tccgcatctc ggggcagccg gtgcccgagc gcgaccgagg cgacttcgcc gacttcatcg
      541 agcgtttcac gaagtttctg cactcccatc atgatggtga ggagcaggtc atctttccct
      601 cgttgcatgc cgccgccgcg cggctctcga tgagggacct gctcgcgcac cttgcctcgt
      661 ggcaggcagc acacgagagg ctgctctccc gcttgcagca gctcgaagac gcctgcaggt
      721 cgtttcgagc aaacggggag caagagccgc tgctgcgaac tgcacgggag gtcaaagacc
      781 tcctagctcc gcacctcgat gccgaggaag ccgcgctctc cgagccgggt ttgctgcaac
      841 taatgtctgc cgagcaggcc tcagcgctgt ctcaggcggc ctcgaagcat ggccaacagc
      901 acggcggtcc gatggtcctc atgatgtatc ttcacggact cacggatgaa gagcagaccc
      961 acttctcgac catgccttgg tttgtgcgcc gggtgctggt gaaacgagtt tgggcacgtg
     1021 ggttccgcgg ctcgttgaag tacgcccaca acccttcga
//
LOCUS       DASRPQ010001674         1616 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3365040, whole genome shotgun sequence.
ACCESSION   DASRPQ010001674 DASRPQ010000000
VERSION     DASRPQ010001674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3365040"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..452)
                     /locus_tag="VFD73_19105"
     CDS             complement(<1..452)
                     /locus_tag="VFD73_19105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76085.1"
                     /translation="MWHLYRAARQRSREQWFSPFGLAEIRERRLRRLAVLAYRSPYYR
                     ELFTNAKIGPDSLTEESLQQLPILEKTTLRANVDRLLPNPDRPMFSVNTSGSTGVPLQ
                     LMRDQRDQAEISALWARVFAAYGRRIRDRQVNIGSGRAVAKKGPVVKLR"
     gene            642..1154
                     /locus_tag="VFD73_19110"
     CDS             642..1154
                     /locus_tag="VFD73_19110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HZI76086.1"
                     /translation="MVPVRRALRLVIEGKAEIVESDDGDVIRSERLTLPKPAIIRLVK
                     FVHVPRRFRRQVTNTFLFARDGYRCQYCHRGHSELRHRECLTRDHLIPLSRGGDNDWS
                     NVVTACSSCNTRKGNHLPQECGMHPLVAPHEPHFVHLSWAVRRLSVTQAKYIKLFYGD
                     EALRALGGTV"
     gene            complement(1166..>1616)
                     /locus_tag="VFD73_19115"
     CDS             complement(1166..>1616)
                     /locus_tag="VFD73_19115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76087.1"
                     /translation="RLHYRVEVWRSREGWFDTFVRQVQWDVLVRHEPLLDQYTLLTFV
                     GPSRQERRYATLDALGAALAFAYQVKVEPPEPGVYYYAASLQVATLSDADLDELERYL
                     GGGLDQPEEGNQNLGDALGREATRFLLRLAGLPSLRLEARSEKFTVR"
BASE COUNT          307 a          513 c          471 g          325 t
ORIGIN      
        1 cggagcttca ctaccggtcc cttttttgca accgcccgtc ccgatccgat attgacttgc
       61 cggtcgcgga tgcgcctgcc gtaggcggcg aagacgcgag cccacagggc agagatctca
      121 gcctgatctc gttgatcccg catcagttgc aggggcaccc cagttgaacc agaggtgttg
      181 accgaaaaca tgggccgatc tgggtttggc agcaggcggt cgacgttggc acggagggta
      241 gttttctcca ggatcggcag ctgctggagc gactcttccg tcagactatc gggcccgatt
      301 ttggcattgg tgaagagttc acgataatac ggggagcggt acgcaagaac agccagccgc
      361 cgaagccgcc tttcccgtat ctcagcgagg ccgaatggtg agaaccattg ctccctgctg
      421 cgctggcggg cagccctgta gagatgccac atgtccaatg ctgacatagc actaacatat
      481 gagcagcggc ttgctgggca aaccggagtt cgttacgatt cggcggtatc tccaggctta
      541 aaaacagcct ggatggtctt gtctcttccg tgttctattg caattcagga gacgacacgg
      601 tgcggtgtct ggcgttaaac gcctcctttg agccgttgac gatggtcccg gtacggcggg
      661 cgcttcgcct tgtgatcgaa ggcaaagccg agatcgtcga atcggatgac ggcgatgtca
      721 tacgaagcga acggctcacg cttcccaaac ctgccatcat ccgactcgtc aagttcgtcc
      781 acgttccccg ccgcttccgt cgtcaagtca ccaacacatt cctctttgcc cgagatggtt
      841 accgctgcca gtactgccac cggggccatt ccgagctgcg gcaccgcgag tgtctgacgc
      901 gcgaccacct cattccgctc tcgcgtggcg gcgacaacga ctggtcgaac gtggtcaccg
      961 cctgcagctc ctgcaatact cgaaagggaa atcacctgcc acaggagtgc ggcatgcatc
     1021 cgctggttgc cccgcacgag ccccacttcg tccacctctc ctgggcggtg cgccgcctct
     1081 cggtgactca ggccaagtac atcaagctgt tctatggaga tgaagcgttg cgggcgttgg
     1141 gcggcacggt ctagcgggac ctcctctacc gcaccgtaaa tttctcgcta cgagcctcca
     1201 gccgcaggct ggggagccct gccagccgaa gcaggaagcg agttgcctcc ctccccagcg
     1261 catcgcccag attctggttc ccttcctccg gttgatccag accaccaccc agataccgtt
     1321 ccagctcgtc cagatcagcg tccgagagcg tcgcgacctg cagcgaggcg gcgtagtagt
     1381 acaccccggg ctccggcggc tcaaccttga cctgatacgc gaaggccaga gcggcgccca
     1441 gtgcgtcgag tgtggcgtag cgccgctctt gtctgctggg tccgacgaag gtcaacaagg
     1501 tatactggtc cagtaacggt tcgtgtcgca ccagcacgtc ccattggacc tgtcggacga
     1561 aggtgtcgaa ccagccttct cgagagcgcc atacctcgac ccggtagtgg agtctc
//
LOCUS       DASRPQ010001675         2708 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2384491, whole genome shotgun sequence.
ACCESSION   DASRPQ010001675 DASRPQ010000000
VERSION     DASRPQ010001675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2708
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2384491"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(224..682)
                     /locus_tag="VFD73_19120"
     CDS             complement(224..682)
                     /locus_tag="VFD73_19120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76088.1"
                     /translation="MPSPLVVDALRDQLVRVLDWYRLQRPAFGWGVVLHRRNERGKLR
                     FGAVTPAGESLILTQPLLAELAQGPCWLDGAVRVRLTCRHVSQNHPWLDALNRPDRPP
                     LVEALAVCFDPDASAAECEAFQAMAGTLTPATLPSELFLLLKKKSAGWPL"
     gene            813..2168
                     /locus_tag="VFD73_19125"
     CDS             813..2168
                     /locus_tag="VFD73_19125"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HZI76089.1"
                     /translation="MTAHGYPESHVLYRKLGRRYPRIVHAEGCYLYDSAGKRYLDGCG
                     GAYVVNVGHGVSEIADAIGCQAATVAYVNGTVFTNDAVEELAAELAPLCPGDLDLVFP
                     LTSGSEAVEAALKIARQYWIEGGQTEKQKVIAFAPSYHGNTLLAMSASSRESYRSSFR
                     PWLVPVAHAPAPYAYRCECRGQPPPCAACSGDAVEATILREGPETVAALIAEPVGGSA
                     TGASVPAPGYWRRIREICDRYEVLWVADEVLTGAGRTGTWSALEPYGVSPDLLILGKG
                     IAGGYAPLSAVVAPRRLIDRLAKHSGVVLHAQTFSHHATLCAAGVATIRYLRKHQLVE
                     RCRVMGQVLHESLGQLRSSSLVGDIRGRGLLAGIEFVADRETRRPFPRAARVAETFAD
                     VALELGLVVWPNSGHLSDSTGDLGLLAPPFIISQQQIEEMIALLQQVLERTAARIGAQ
                     R"
     gene            2165..>2708
                     /locus_tag="VFD73_19130"
     CDS             2165..>2708
                     /locus_tag="VFD73_19130"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HZI76090.1"
                     /translation="MTTATKITYTSATGDLDEFHRRFDSGLREIREASGQLHPFYIDG
                     EPVRSDEEPLVDRSPIDTTNILGRFAGATEAHVDLAVQAARRGRHDWAGRPWRERVAI
                     LRRAAGIIRERKYRLAALMSLEVGKSRLEAMGDAEESADLIDYYCGQMEDADGFVRRM
                     AQITPVERNTDVLRPYGVFAC"
BASE COUNT          518 a          840 c          886 g          464 t
ORIGIN      
        1 tccgctccag gaaaggcccc ggtggcgcga tacaccgaaa gagccatctg atgcgcccgt
       61 ttccaggccg aaagctgccg gtaatcaccc acgcaggcat gttagggaga cagccgagcc
      121 gccgcgttac caaattcgcg cagatacaag ccattgtgag ttgtagtccg tggccagcag
      181 gacgtccacg actgaggact gacgactgac gactgacgac tacctacaac ggccaccctg
      241 cagatttttt cttgagaaga agaaacaatt cggaagggag tgtggcgggg gtcaaggtac
      301 cggccatagc ctgaaacgct tcgcattcgg cggcagaggc atcggggtcg aaacagaccg
      361 ccagcgcctc caccaatggc ggtcggtcgg gccggttgag cgcgtcgagc cagggatggt
      421 tctggctgac atggcggcac gtcaacctga cccggaccgc tccatccagc cagcagggcc
      481 cctgggccag ctccgccaat aacggctggg taagaatcag gctctccccg gccggtgtca
      541 ccgccccaaa ccgcaatttg cctcgctcat ttcggcggtg cagtaccacc ccccacccga
      601 aggccggccg ttgaagccga taccaatcga gcacccggac gagctgatcg cgtaaagcat
      661 cgactacaag tggagatggc atggttccga ccgacggaag aggttgccgc accaatcggt
      721 gcagccggac ggcgcgatag ctatgcagaa tgcgggccag acgagctccc ctggcgtcga
      781 cccacgacca cccgcacatt cccgaaccgc ccatgactgc ccacggctac cctgaatccc
      841 acgtcctcta ccggaagctc ggccgccggt acccgcggat cgtgcacgcc gaggggtgtt
      901 acctctacga ctccgccggt aagcgctatc tcgatggctg tggtggcgca tacgtagtga
      961 atgtaggaca cggagtcagc gaaattgcag acgcgatcgg ctgccaggcc gcgacggtgg
     1021 cgtacgtgaa tggaacggtg tttaccaacg atgcggtgga ggagttggcc gccgaacttg
     1081 cgccgctctg tcccggcgat ctcgatctgg tgttccccct gaccagcggc tctgaggcgg
     1141 tcgaggcggc gttgaagatt gcccggcaat attggatcga gggcggccag accgaaaagc
     1201 agaaagtcat cgccttcgcg ccgtcgtatc acggtaacac gctgctggcg atgtcggcgt
     1261 cgtcccgcga gtcctaccgc tccagcttcc gcccatggtt ggtgccggtg gctcatgccc
     1321 cagctcccta tgcgtaccgg tgtgagtgca ggggccaacc tccgccatgc gcggcgtgca
     1381 gtggcgatgc agtagaagcc acgatccttc gggaagggcc cgaaactgtc gctgccctta
     1441 tcgccgaacc ggtgggcggc tcggccaccg gcgcatcggt gccggcgccg ggctactggc
     1501 gcagaattcg ggagatctgc gaccgctatg aggttctctg ggtggcagac gaagtcctta
     1561 ccggagctgg ccgcaccgga acgtggtcgg ctctggaacc gtacggggtg agtcccgatc
     1621 tcctgatcct ggggaaggga attgccggcg gctacgcccc gctctcggcg gtggtggcac
     1681 cgcggcggtt gatcgatcgt ctggcgaaac attcgggtgt cgtgctgcat gcccagacct
     1741 tctcacatca tgccacactg tgcgcggcgg gagtggcgac gattcgttat ctccggaagc
     1801 atcagctcgt cgaacgctgc cgggtcatgg gccaggtgct gcacgagagt ctggggcagc
     1861 ttcggtcctc ttctctggtg ggcgacattc ggggcagagg gctgctggcg ggaatcgagt
     1921 tcgtcgccga ccgagaaacc cggcgaccgt ttccgcgagc ggcccgggtg gcggaaacgt
     1981 ttgccgacgt cgccctggag ctgggtctcg tcgtgtggcc gaactcgggt cacctgagtg
     2041 acagcaccgg tgatctcggc ttactcgcgc ctccgttcat catcagtcag caacagatcg
     2101 aggagatgat cgcactcctg cagcaggtgc tggagcgcac cgcagcacgc atcggagcac
     2161 aacgatgacg acagcgacca agatcacgta tacctcagcc accggcgatc tggacgagtt
     2221 ccatcggcga ttcgatagcg ggctgagaga gatccgtgaa gcatcaggac aactccaccc
     2281 gttttacatc gatggtgaac cggtccggag cgacgaagag ccgctggtgg atcggtctcc
     2341 gatcgatacc acgaacatcc tgggacgctt tgcgggcgcg acagaggccc atgtggacct
     2401 cgcggtacag gccgcccgcc gaggacgcca cgattgggcc ggccggccgt ggcgggagag
     2461 ggtcgcgata ctccgccgcg ccgcgggaat catccgggag cggaagtatc gtctcgcggc
     2521 attgatgagc ctggaagtgg ggaagagcag gctggaggcg atgggcgacg ccgaagaatc
     2581 tgccgacctg atcgattact actgcggtca gatggaagat gccgacggct tcgtccggcg
     2641 gatggcgcag atcaccccgg tggagcgcaa caccgatgtc ctccgtccct acggggtctt
     2701 tgcctgca
//
LOCUS       DASRPQ010001676         1306 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_822067, whole genome shotgun sequence.
ACCESSION   DASRPQ010001676 DASRPQ010000000
VERSION     DASRPQ010001676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_822067"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..774)
                     /locus_tag="VFD73_19135"
     CDS             complement(<1..774)
                     /locus_tag="VFD73_19135"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HZI76091.1"
                     /translation="MTRDQPIAAESTDEGLLSIGALSSATGIPIDTIRTWERRYGFPV
                     PERKPSGHRVYPLAVVPRLRRAAQAIARGHRAAEVVPASERALDALLDSVSRRGSPDR
                     ERNPLSVPSADVDGDNLLGMVRRFDADALQRKFQSEWVRLGPIEFLERLAAPFLSRLG
                     TAWAEGALEVRHEHFGSGVLGDFLRAVRAPLDGRAAGPVVALATLPDELHGLGLQMAA
                     VVFAVAGWRSLVLGVDTPIPQIVALAREARLHAVALSCVQ"
     gene            complement(816..>1306)
                     /locus_tag="VFD73_19140"
     CDS             complement(816..>1306)
                     /locus_tag="VFD73_19140"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HZI76092.1"
                     /translation="ESPRRFFVEGLAGAVVPTFDISDVAKTGWALGGTLGYRVNDRWT
                     LMAELDYGRHKDKLTGDVNINTLHYIGKLGYSLTGPKERGWEAAVNLGAGAVTFDVQD
                     APRNFTYFAINAGAKLTYNFNPKLAFVLSPQGDIAFSDEAEVTTNNSWVWPVTAGVRV
                     SF"
BASE COUNT          255 a          428 c          417 g          206 t
ORIGIN      
        1 ctgcacgcag ctcaatgcta ccgcatggag ccgagcttct cgggccaatg caacgatctg
       61 tgggatcgga gtatcgacgc cgagcaccag ggaccgccag ccggccactg caaagaccac
      121 ggcggccatc tgcagtccca gaccgtgcag ctcatccgga agggtcgcga gggcaacgac
      181 cgggccggcg gcccgcccgt ccagcggtgc ccggaccgcc cgaaggaaat cgccgaggac
      241 gccggagccg aagtgctcgt gccgcacctc cagcgctcct tcggcccatg ctgttcccag
      301 gcgggacaga aatggtgccg ctaagcgttc caggaactcg atcggcccga gccggaccca
      361 ctccgactgg aactttcgct ggagcgcgtc ggcgtcaaag cggcgcacca ttcccagcag
      421 gttatctccg tccacatcgg ctgaggggac ggaaagggga ttgcgctccc ggtccggcga
      481 tcctcgccga gaaacagaat cgagcagcgc atcgagagct cgttccgacg cgggaacaac
      541 ctcggcggct cgatgacctc gagcgatggc ctgggccgct cgtcgcagcc gcggcacgac
      601 ggccagcggg tatacccgat gacccgatgg tttccgctcg ggaaccggga agccgtagcg
      661 acgctcccag gttcggatcg tgtcgatggg aataccggtg gcgctggaga gcgcgccgat
      721 ggagaggagg ccttcatcgg tagactccgc tgcaatcggc tggtcacggg tcatgcgcaa
      781 acgtacgcaa ctctcaatgg gtggagagac gaacgctaga aggaaacccg gacaccggcg
      841 gtcaccggcc agacccagga gttgtttgtt gtaacttcgg cctcgtcgct aaaggcgatg
      901 tcgccctgag gagagagcac gaacgcgagc ttcggattga agttgtacgt gagcttggcg
      961 ccggcattga tggcgaaata ggtgaaattc cgcggcgcgt cctgcacgtc gaaggtgacc
     1021 gcacccgcgc ccaaattcac cgccgcctcc cagccccgct ccttgggtcc agtcagcgaa
     1081 tacccgagct tgccgatgta atgcagggta ttgatgttca catccccggt gagcttgtcc
     1141 ttgtgcctgc cgtaatcgag ctcggccatc agcgtccacc gatcattgac ccggtacccc
     1201 agcgtgccgc cgagggccca gccggtcttg gcgacgtcgc tgatgtcaaa agtgggaacc
     1261 accgcgccgg ccaatccctc gacgaagaac cgccgcggcg actcct
//
LOCUS       DASRPQ010001677         1686 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4591223, whole genome shotgun sequence.
ACCESSION   DASRPQ010001677 DASRPQ010000000
VERSION     DASRPQ010001677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1686
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4591223"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..418
                     /locus_tag="VFD73_19145"
     CDS             <1..418
                     /locus_tag="VFD73_19145"
                     /inference="COORDINATES: protein motif:HMM:NF033563.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HZI76093.1"
                     /translation="AAAARWDRSGRRAKLAPDSPLFAEVAKLLRRQWSPEQIAGRRKR
                     LEEGTAVSSGLRVSHETIYQAISAVPRGELRRELLACLRQGKPHRGRRSKDGERRGRI
                     CDMTSIRERPAEVAGRLVPGHWVRWTPELGQPTEVS"
     gene            complement(453..1609)
                     /locus_tag="VFD73_19150"
     CDS             complement(join(453..1339,1339..1609))
                     /locus_tag="VFD73_19150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612068.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZI76094.1"
                     /translation="MSKTRRNHGSAFKAKVALEALKGELTVAEISAKHGLHPTLVNEW
                     KRQLADGAPSVFEKGTGKAEKDSEALVGELYKQIGQQKVELDFLARKARSLSRAERHP
                     MIDRLNEKLSLTRQCQLLGLSRSSLYYHPANDNTEDLALMALIDRQFMETPYYGSRKM
                     TAWLRRAGHVVNRKRVRRLMRQMGLQVIWQKPDTSKPNPEHKIYPYLLRGLKIDRPNQ
                     VWATDITYIPMPKGFFYLVAIMDWHSRKVLTWRLSNTMDATFCVEALEDALATYGRPE
                     IFNSDQGAQFTSTAFTGVLEAAGVRISMDGKGRCMDNIFVERLWRSLKYEDIYLRAYG
                     TGSEARLGIGHWIAGYNTTRPHQALGYRTPDEVYTSLPELGLAPIPTDVAA"
BASE COUNT          277 a          539 c          538 g          332 t
ORIGIN      
        1 cgcggcggca gcgcggtggg accggtcggg acgccgggcc aagctcgcgc cggacagccc
       61 gctgtttgcc gaggtggcga agctgttgcg ccggcaatgg tcgccggagc agatcgcggg
      121 aaggcgcaag cgcctggagg aggggacggc ggtgtcgtcc gggctgcggg tttcgcatga
      181 gacgatctat caggcgatct ccgccgtacc gcgcggtgaa ctgcgccggg agctgctcgc
      241 ctgcctgcgc cagggcaagc cgcaccgcgg ccgacggtcc aaggacggcg aacgccgcgg
      301 ccggatctgc gacatgacca gcatccgcga acggccggcg gaggtcgcgg gccgtctggt
      361 gcccgggcat tgggtgagat ggaccccgga gttaggacag ccgactgagg tttcttagct
      421 ctggccgatc cccctggggt gaggagtgcc gatcatgctg ccacatcggt cggtatcggg
      481 gcgagcccca attccggcaa tgatgtgtag acctcgtcag gcgtgcgata gccgagtgcc
      541 tgatgaggcc gggtggtgtt gtagcccgcg atccagtggc cgatccccag gcgggcctcg
      601 gaaccggtgc cgtaggcccg cagataaatg tcttcgtatt tcaagctgcg ccacagccgc
      661 tccacaaaga tgttgtccat gcagcgtcct ttgccgtcca tgctgatccg gacgccggcg
      721 gcttccagca cgccggtgaa ggccgtgctg gtaaactgcg caccctggtc gctgttgaag
      781 atctccggcc ggccgtaagt ggccaaggcg tcctcgagcg cctcgacaca gaaggtcgcg
      841 tccatggtat tggacagccg ccacgtcagc accttcctgc tgtgccagtc catgatggcc
      901 accaggtaga agaacccctt gggcatcggg atgtacgtga tatcggtcgc ccacacctgg
      961 ttgggccggt cgatcttcag gccgcgcagc aggtacggat agatcttgtg ctcggggttc
     1021 ggcttgctgg tgtcgggctt ctgccagatc acctgcaggc ccatctgacg catcagccgg
     1081 cggacccgct tgcgattgac gacatgaccc gcccggcgca gccaagccgt catcttgcgg
     1141 gagccgtaat atggcgtctc catgaactgg cggtcgatca gcgccatcag agccagatct
     1201 tccgtattgt cgtttgccgg atgataatag agcgatgaac ggctgagccc cagcaactgg
     1261 cactgccggg ttaacgacag cttctcgttc agcctgtcga tcatcggatg cctctccgcc
     1321 cggctcagtg accgagcttg cgtgccaaaa aatccagttc cactttctgc tggccgattt
     1381 gcttgtaaag ctccccgacc agggcctcac tgtccttctc ggccttgccg gtccctttct
     1441 cgaagaccga cggtgcgccg tcagccagct gccgtttcca ctcgttgacc agcgtcgggt
     1501 gaagcccgtg cttcgcggag atttccgcca ccgtcagctc tcctttcagg gcctccagcg
     1561 ccactttcgc cttgaatgcc gatccatgat tccggcgggt cttgctcatc gtcgtcgatc
     1621 ctttctcgcg cgttcgagat cagatccaga gccaagccat ctgtccagtt tttcgggacc
     1681 agctca
//
LOCUS       DASRPQ010001678         1040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2105231, whole genome shotgun sequence.
ACCESSION   DASRPQ010001678 DASRPQ010000000
VERSION     DASRPQ010001678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2105231"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..700)
                     /locus_tag="VFD73_19155"
     CDS             complement(<1..700)
                     /locus_tag="VFD73_19155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76095.1"
                     /translation="MARLADYLDLAVSQARQQFRELKRRTPVSSGRQAVFLPVETLLC
                     LAVSFQINHRRFGGSTAHLAPEPIPSLARLFSRPPSSILAKMANLDGSRSHGGKHDIL
                     AGAILRDEPAHFTHIYRTLLTAARSEGIGPDRLPDFLGLEHHGEFDLLGQDELSPSTL
                     ENAFKDQIAKAAASTTWTEQETERILLAAARVGQHLFAKNVLANCGGQCVFCGLNPGP
                     FGGKRMLLAGHIKPW"
BASE COUNT          198 a          276 c          384 g          182 t
ORIGIN      
        1 tccacggctt gatgtgccct gcgaggagca tgcgcttgcc gccgaacggt ccggggttaa
       61 ggccgcagaa cacgcactgc ccgccgcagt tggccaggac gttcttggca aacaggtgct
      121 ggccgacccg agccgcggcg agcaggatgc gctcggtctc ctgctcggtc caggtggttg
      181 aggcggctgc tttggcgatc tggtctttga aggcattctc cagggttgat gggcttagct
      241 cgtcctggcc gaggaggtcg aattcgccgt ggtgctcaag gccgaggaag tcgggcaggc
      301 ggtctgggcc gatgccctcg gatcgggccg cggtcagcag cgtgcggtag atgtgggtga
      361 agtgggcggg ttcgtcgcgg aggatggcgc cggccaggat gtcgtgcttg ccgccgtgcg
      421 agcgggagcc gtcgaggttg gccatcttgg ccaggatgct ggagggcggc cgggagaaga
      481 ggcgggccag agaggggatc ggctcgggag ccaggtgcgc ggtcgagccg ccgaagcggc
      541 ggtggttgat ctggaaagag acggccaggc agagcagggt ctcgacgggg aggaagacgg
      601 cttggcggcc ggaggagacg ggggtccggc gtttgagctc gcggaattgc tggcgtgcct
      661 ggctgacagc taggtccagg tagtcagcaa gtctggccac gcttggaagg ttacggcaac
      721 ggcgcggaag tggtcagcta cccgcctggg gttgcggcca gcaacttaat ggaccaagat
      781 ccgctcggac cactgctttg taacagatgt ggcagatctt cataaaagag ccgatgcaat
      841 taacagaagc ctgccatgga acgcatgcag gagcttaatc tagttcgagc ccttattgga
      901 gtaagtacgg aaatgagttg ccgaccagcg aacattcaca gacaggccaa accgtctcat
      961 gctacggacg ggaagaccga caagtcacaa gggctaactg cagcctgatt ttaggcctcg
     1021 cagcgcccat ccccgcacgc
//
LOCUS       DASRPQ010001679         1051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2384771, whole genome shotgun sequence.
ACCESSION   DASRPQ010001679 DASRPQ010000000
VERSION     DASRPQ010001679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2384771"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..289
                     /locus_tag="VFD73_19160"
     CDS             <1..289
                     /locus_tag="VFD73_19160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZI76096.1"
                     /translation="AGFAEPSYRGLAGFQTYWTAVSDVWGSDLNFEPVELIDMGDRLV
                     ALASLHAHGQTSGVPLTRKYAQMVTLKDGLVIRQEEYPSHAEALEAAGLSE"
     gene            293..697
                     /locus_tag="VFD73_19165"
     CDS             293..697
                     /locus_tag="VFD73_19165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76097.1"
                     /translation="MSHENVEIVRSIYSAWERGDYSSTEWQHPKVEFVVADGPTPASG
                     TGATEISEVWGAFLSAWEGFHHRADEYQELDSERVLVLSRFGGRGKTSGLEIEQTAAK
                     AAVLFHISDREVTRIVLYFDRERAFADLGLSG"
     gene            703..>1051
                     /locus_tag="VFD73_19170"
     CDS             703..>1051
                     /locus_tag="VFD73_19170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76098.1"
                     /translation="MQENVEVVRRWHDAMRSIDPVDIADVVAELWEADANYYPVRKWP
                     EARPCHGQEAVAQFFFRGREVLTRMESQVRWMIPLDDCRVLVCGELQWEGRGSGISLE
                     GTIYYSYWLRRGRL"
BASE COUNT          195 a          283 c          367 g          206 t
ORIGIN      
        1 ggcaggattt gcggagccgt cctatcgcgg gttggcgggc ttccagacgt actggacggc
       61 tgtgtccgat gtctggggca gtgatctcaa ctttgagccc gttgagctga tcgatatggg
      121 agatcgcctt gtggcactcg caagccttca tgcccacggt cagaccagcg gtgtcccgct
      181 cacacgtaag tacgcccaga tggtcacgct gaaggacggc ctggtgatcc gccaggagga
      241 gtaccccagc cacgcggaag ccctcgaagc cgccggactt tcggagtagg cgatgtcgca
      301 cgagaacgtg gagatcgtgc gctcgattta ctcagcttgg gagcgtggtg actacagctc
      361 taccgagtgg cagcatccca aagttgagtt cgttgtcgcc gacgggccca ctccggccag
      421 tgggacaggg gcgacagaga ttagtgaggt atggggtgcc ttcctgagcg cctgggaggg
      481 atttcaccac cgagcggatg agtatcagga gctcgacagt gagcgggtgc tcgtgctctc
      541 tcgcttcggt ggtcgcggta agacgagcgg acttgagatc gaacagacgg cagcgaaggc
      601 agccgtgctg ttccatatca gcgatagaga ggtgacgagg atcgtcctct acttcgaccg
      661 cgagcgcgca tttgccgacc tcggactttc ggggtaggcg atgtgcagga gaacgtggag
      721 gtggtccgcc gctggcacga tgccatgagg agcatcgacc cagtggatat tgcggacgtc
      781 gtcgcagagc tgtgggaggc cgacgcgaac tactatccgg tgcgcaaatg gcctgaggca
      841 cgaccgtgcc acggccaaga agcggtcgcg cagttcttct tccggggccg tgaagtgctg
      901 actcgcatgg agagtcaggt gcggtggatg atcccgctgg atgactgccg agtcctggtg
      961 tgcggcgagt tgcagtggga gggtcgcggc agcggcatca gcctcgaagg cacgatctac
     1021 tactcctatt ggttgcgtcg tggtcgcctt c
//
LOCUS       DASRPQ010001680         5518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2105422, whole genome shotgun sequence.
ACCESSION   DASRPQ010001680 DASRPQ010000000
VERSION     DASRPQ010001680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5518
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2105422"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..765
                     /locus_tag="VFD73_19175"
     CDS             <1..765
                     /locus_tag="VFD73_19175"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HZI76099.1"
                     /translation="IFADRRYRLLWPLPTRDSPLSPQVLGTSYSRLITWLVCEYAKSR
                     RKGEASVWVDHTPTNFRRASTLVEMFPEARFIHLVRDGRAVAASLLELDWGPNNTFDA
                     AEFWMARCAPGLVAELRFGLDRVLRVRYEDLVSKTEATLRRVVSFAGLEYESGMAQGT
                     GLRPGAYNQQQHRLVGSPPNPSRVDRWRRTLTPRQVEVFEAEAGDFLGSLGYQPVYGI
                     RARPATRIEVLRLRLLDLPQRAANNLRRRLREQRSL"
     gene            996..1790
                     /locus_tag="VFD73_19180"
     CDS             996..1790
                     /locus_tag="VFD73_19180"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HZI76100.1"
                     /translation="MRSLHAFSFALGCSIVAGGCSSDNVTSPSAQASTLAQLLPSHSV
                     LRSKLRQVMEQQNGGLGFEMWATIVDRNGRVVDVVFSGEKRTDQWPGSRVISAQKANT
                     ANAFSLDNFALSSANLYAAVQPGGSLFGLQESNPVDPRVAYAGNAADFGTVNDPMIGK
                     RIGGINVFGGGLALYAPSGRLLGGIGLSGDTSCSDHIKAWKLRHLLNLDNVPAGPAPS
                     NTDNIIYQDGTLDGFEHPTCLDLQGQGNSVTIGNNLPNSNPVGPQE"
     gene            complement(1842..2471)
                     /locus_tag="VFD73_19185"
     CDS             complement(1842..2471)
                     /locus_tag="VFD73_19185"
                     /inference="COORDINATES: protein motif:HMM:NF017959.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF998 domain-containing protein"
                     /protein_id="HZI76101.1"
                     /translation="MSKGLEGATGMPLAFTGGIGAILAYLICSATAWSLYPGTFGPFR
                     NWLSDLGNPLRNPAGAVWYNAGCILTALGLLVFVLGLSSWRSGRSTGNALIATSQLTG
                     LASVISLAMIGVYSENHLRQHMISSNWFFACFPLFIVLFSTGVITHPRSRKDIGMLGL
                     AVVLLGLLFHLIFPKSRPLEWVTELGFLVYVGVVAWSTRHPFSSRAIGG"
     gene            2785..4191
                     /locus_tag="VFD73_19190"
     CDS             2785..4191
                     /locus_tag="VFD73_19190"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZI76102.1"
                     /translation="MRSAAVTRPVVIACLMLSITGARVAREPGSTQSLLSLEHATLIN
                     PGVDPVANSTVLIQNDRITCAGTASACPRPAGAKAVDLSGMFLGPGLIDSHVHYSQTG
                     WVDGRPDAADLRSRYPYDSVVASLREHPERFHRANLCSGVTTAFDVGGFPWTYDLARR
                     TRQATDAPRVVAVGPLLATITVDSQMMGQFVYMSSDSVVRAAVDQHRAAGAEAIKVWY
                     IQVPDSLHPHAKAMLMAAGDETRKVGLRLIVHATELPNAKDALEAGARVLVHDVEEGL
                     VDQQFLRAVRRNGTIVIPTLTVLEGYADVFLGRSPQTRYPLDCVDPITRHKLETVLPD
                     SLRVRGKSFWSSPKAAALMSTSVENLRRMYHAGVPIAMGTDAGNPGTAHGPSVYREME
                     LMQQAGMAAPAVFSSATIVAAQAAGLDQEVGSVAPGKRADLVVFGADPTRDIHNARQV
                     KFVIRNGALHSRQDLLPQ"
     gene            4208..>5518
                     /locus_tag="VFD73_19195"
     CDS             4208..>5518
                     /locus_tag="VFD73_19195"
                     /inference="COORDINATES: protein motif:HMM:NF013591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HZI76103.1"
                     /translation="MVHRRVVVLGLALLSLRCAGTPGTATHSGPSTAPKAQAFTDANP
                     FTRPSALPYQAPPFDKIGNLDYQPAIEEGMRRQREEWNTIARQSSPPSFDNTIVALDR
                     SGALLSRVNHAFNAVVGANTNDTLQQVQTEEAPKLAAHYDALYLDPLMFRRVEAVYQN
                     RASMGPDQRRLVERYHRDFVRAGAQLSASDQDRLRKLNQEEATLSTDFQNKLLDATKN
                     GALVVDSPTELQGLSKEEIAAAGQAAQERKLPGKYVIPLQNTTQQPAQASLMNRSVRQ
                     RLFEASIHRADRGDSNDTRAIVRRLAQLRTERAQLLGFPTYAAYALDNQMAKTPDHAI
                     ALLSQVVPPATRKARSEAEKMQGLIDRQNGGFKLAAWDWQYYAERVRQAEYNLDETQI
                     KPYLLLDRVLQDGVFFAANRLYGLTFKERKDIPVYHPDVRVFEVF"
BASE COUNT         1075 a         1764 c         1659 g         1020 t
ORIGIN      
        1 atctttgcgg accgccgcta tcgccttctc tggccccttc ccactcgcga cagtcctctg
       61 tccccccagg tgctcggcac cagctactct cggctcatca cctggctggt ctgcgagtac
      121 gccaagagcc gccgcaaagg ggaagcgtcg gtgtgggtgg atcacacgcc caccaacttc
      181 cgtcgagcgt caaccctcgt cgagatgttc cctgaggcgc gattcatcca cctggtacgg
      241 gatggtcgag ccgtcgcggc ctcgctgctg gagctcgact ggggaccgaa caacaccttc
      301 gatgccgcgg aattttggat ggcgcgctgt gcaccgggtc tggtggctga attgcgattt
      361 ggcctggatc gcgtgctgcg ggtccgatac gaagacctgg tcagcaaaac cgaggcaacg
      421 ctgcgccggg tggtgtcctt cgctggcttg gagtatgaga gcgggatggc ccaggggacg
      481 ggattgagac cgggagcgta caaccagcag cagcaccgtc tcgtcggatc cccaccgaat
      541 ccctcgcgcg tcgaccgctg gcgacggaca ctgacgccac ggcaggtgga agtgtttgag
      601 gcggaggccg gcgacttcct gggcagcctc ggctatcagc cggtatacgg gatccgcgcc
      661 cgccccgcca ctcgcatcga ggtgctccgt ctgcggctcc tcgacctgcc tcagcgtgcg
      721 gcgaacaacc ttcgtcgccg actgcgggag cagcgatcgc tctagcgagc tacctacatc
      781 cagccggcgc tttgtccttc ttgtggagcc cggtcccgca ggtaagttga ttccttcgta
      841 atttttcttc tcaccgtaat gccgcggtac catggcgctt gctgcgactt tgcgcctgag
      901 gttgggttgg ctgtccggcc gggcccgtgg tccgccctgc tccttccgat gtgctcctcg
      961 tcatccctat gtccccactc ggaaggagaa gtgtcatgcg ctcgcttcat gctttttcat
     1021 tcgctctcgg gtgcagcatc gttgccggcg gttgcagcag cgataacgtg accagtccca
     1081 gtgcccaggc cagcaccctg gctcagttgc tgcccagtca cagcgtccta cgcagtaagc
     1141 ttcgacaagt catggaacag cagaatggcg gcctcggctt cgagatgtgg gccaccattg
     1201 tcgaccggaa cggaagagtc gtcgatgtgg tcttcagcgg agagaaacgc accgatcagt
     1261 ggccgggcag ccgagtgatc tcggcgcaga aggcaaacac cgccaacgcc ttcagtctgg
     1321 ataactttgc gctcagtagc gctaacttgt atgccgctgt tcagcctggc ggcagcctct
     1381 tcggcttaca ggagagcaat ccggtggatc cgcgggtggc atacgcaggc aatgccgcgg
     1441 atttcggcac cgtgaacgat cccatgatcg gcaagcgaat cggcggaatc aatgtcttcg
     1501 gaggaggatt ggcgctgtac gcaccgagtg gtcggctcct cggcggaatc ggcctcagcg
     1561 gtgatacctc gtgcagcgat cacatcaagg cttggaagct gcgccacctc ctgaatctcg
     1621 ataatgtgcc ggcaggaccg gcaccgagca acacggacaa catcatctac caagatggaa
     1681 cgctggacgg gttcgagcat ccgacctgcc tggacctcca ggggcaggga aatagcgtta
     1741 cgatcggcaa caacctgccg aacagcaatc cggtcggccc gcaggagtga gcttgccggt
     1801 gaatctgtgt ccgcggtcgc ctcgaaggct gccgcggacc ttcacccgcc gattgcccga
     1861 gaggagaacg ggtgcctggt gctccaggca accaccccca cgtagacaag aaagcccagc
     1921 tcagtcaccc actcgagcgg ccggctcttg ggaaagatca ggtgaaacag cagccccagc
     1981 agcacgactg cgagccccag catcccgata tccttgcgag atctcgggtg ggtaatgaca
     2041 ccggtggaaa agaggacgat gaacaagggg aagcaggcaa agaaccagtt cgaggagatc
     2101 atgtgctgtc gaagatgatt ttccgaatag accccgatca tggcgagtga aatcaccgac
     2161 gcgagaccgg tgagctggga ggtggcgatc agggcgtttc ccgtcgatct tcccgaccgc
     2221 caggagctga gacccagcac aaagaccagc agtcctaaag cggtgagaat acatccggcg
     2281 ttgtaccaga ctgcaccggc tgggttgcgg aggggattgc ccagatcact gagccagttc
     2341 ctgaagggcc cgaacgttcc gggatacaac gaccaagctg tcgcactgca gatcaggtac
     2401 gccagaatag ccccgattcc gccggtgaac gcgaggggca tgccggtggc cccttcaagc
     2461 cctttgctca agctttcctc ctggtgagta ctgtaccgcg gctccagcag agataggcca
     2521 acacgaagaa gcatgaggcc aaccgactgg cttcgccagt cggagccgtt caaattatgt
     2581 ggtcactgac ctgtcggccc accattgtca gaggagaccc aagcatcccc aagtccgaca
     2641 cccgacggat cgcccgcttt gccgctctcg ccattgcaat cttgttactt gccgcaacac
     2701 tctggcacct gctggatcgc tgactgcctg gcgaaaacac ccgatgctag gcacactaca
     2761 accacacttt ccgcgagagc tacgatgaga tcggcggcag tcacgcgtcc tgttgtcatc
     2821 gcctgcctga tgctttcgat caccggtgcc cgtgtggcca gagaacctgg ttcaacccag
     2881 tctctgctca gcttggagca cgccactctg atcaaccccg gtgtcgatcc cgtcgcgaac
     2941 agcaccgtac tcattcagaa cgatcgcatc acctgcgctg gaactgcgag cgcgtgccca
     3001 cggccggccg gcgccaaggc ggttgatctg agcggaatgt ttctcggtcc ggggttgatc
     3061 gactctcacg tccactactc ccagaccggc tgggtggatg ggaggcccga cgccgccgac
     3121 cttcggtccc gatatccgta cgattccgtc gtcgcctcgc tccgcgagca tcccgagcgc
     3181 tttcatcgcg ccaacctctg cagcggggta accaccgcgt tcgatgtcgg cggtttcccc
     3241 tggacctacg acctggcccg acggacccgc caagcaaccg atgctccccg ggttgtagcc
     3301 gtcggaccgc tgctcgccac gattaccgtg gattcgcaga tgatgggaca gttcgtctac
     3361 atgtcgagcg actctgtggt ccgcgctgcc gtcgatcagc atcgtgccgc cggcgcggag
     3421 gcaatcaagg tctggtacat ccaggtgccg gactcactcc atccgcatgc gaaagcaatg
     3481 ctcatggctg ccggcgacga gacccggaag gtgggcctgc gactgatcgt tcatgctacg
     3541 gagctgccca atgccaaaga cgcgctcgaa gccggcgcca gggtgctggt gcacgatgtc
     3601 gaggaggggc tggtcgatca gcagttcctt cgcgctgtcc ggcgaaacgg cacaatcgtc
     3661 attcccactt tgaccgttct cgaggggtat gccgatgtct tcctcggccg ctctccgcag
     3721 acacgctatc ccctggattg tgtggatccg atcacccggc acaagctgga gaccgtgctc
     3781 cctgacagtc tccgggtccg cggcaagagc ttctggagca gtcccaaggc tgccgcactc
     3841 atgtccacct cagtcgagaa cctccggcgg atgtatcacg ccggtgtccc gattgccatg
     3901 gggaccgatg ccggcaaccc tgggactgcc catgggccga gcgtgtatcg cgaaatggag
     3961 ctgatgcaac aggccgggat ggcggcacca gcggtgtttt cgtccgccac gattgtcgct
     4021 gcgcaggcgg ccgggctgga tcaggaggtt ggctcggttg ctcccggaaa gcgggccgac
     4081 ctggttgtgt tcggggccga ccccacccgc gacatccaca acgccaggca agtcaaattc
     4141 gtcattcgga acggcgcgct gcactcgcgc caagaccttt tgccacagta gacgcacgga
     4201 gattcccttg gtccaccgaa gagtcgtcgt tctgggtctt gctctgcttt ctctgcgatg
     4261 cgccggcact cccggtactg cgacgcactc gggcccatcg actgcgccca aggcgcaggc
     4321 gttcaccgat gcgaatccct ttacccggcc gagtgccctc ccctaccagg cgccaccatt
     4381 cgataagatc gggaatctgg attatcagcc ggcgatcgaa gagggcatgc gccggcaacg
     4441 ggaggagtgg aacacgattg cgaggcaatc ctctccgcct tcgttcgaca ataccatcgt
     4501 cgcgctggat cgaagcggcg cactgctcag ccgggtaaac cacgccttta atgcagtcgt
     4561 gggcgcaaac accaacgata cgctgcagca ggtccagacg gaggaagccc caaagctcgc
     4621 ggctcactac gatgctctct atctcgatcc gctgatgttc cgccgggtcg aagcagtcta
     4681 ccagaatcgt gcttccatgg ggcctgacca gcgacgcctg gtggagcgat atcatcgcga
     4741 cttcgtgcgc gccggcgccc agctctccgc ctcggatcag gatcggcttc gcaagctgaa
     4801 ccaggaggag gccaccctct ccaccgactt ccagaacaaa ctgctggacg ccaccaagaa
     4861 cggagccttg gtggtggaca gtccgactga gctgcagggt ctcagcaagg aagagattgc
     4921 cgctgcgggc caagctgccc aagagcgaaa gctgccgggg aagtacgtca tcccactgca
     4981 aaacaccacc cagcaaccgg cacaagcctc gctgatgaat cgctccgttc ggcaacggct
     5041 tttcgaggca tccatccacc gggccgaccg gggcgactcc aacgataccc gggcaatcgt
     5101 gcgccgtttg gcgcagctcc ggacggaacg ggcgcagctc ctcgggtttc ccacctatgc
     5161 ggcgtacgcc ctggataatc agatggccaa gacaccagat catgccatcg cattgctcag
     5221 ccaggtcgtt cccccggcaa ctcggaaggc gaggagcgaa gcagagaaga tgcagggact
     5281 catcgatcgg cagaacggcg gcttcaagct ggctgcctgg gattggcagt actacgctga
     5341 gcgggtgcgt caggcggaat acaacctgga cgagacgcag atcaagccat acctgctgct
     5401 ggatcgggtg ctgcaggacg gtgtcttctt tgccgccaat cggctctatg gcttgacctt
     5461 caaggagcgc aaggacattc cggtgtacca ccccgacgtc agggtattcg aggtcttc
//
LOCUS       DASRPQ010001681         2809 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_506743, whole genome shotgun sequence.
ACCESSION   DASRPQ010001681 DASRPQ010000000
VERSION     DASRPQ010001681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2809
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_506743"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..1743)
                     /locus_tag="VFD73_19200"
     CDS             complement(106..1743)
                     /locus_tag="VFD73_19200"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HZI76104.1"
                     /translation="MRVTPVIFALAFGTTTIRAQQTPSPAAEVARAVDSMVFRAHLKF
                     LADDALEGRRPGTRGGELAAKYIAAQFERLGLEPAGDSGTYFHRVPIITLNPDPVVKL
                     TGAATGELAYRKDYVLWSMRNEPAVQVSGDLVFVGYGIVAPEYQWNDYKNVDVKNKIV
                     VVLVNDPGLRDSTIFRGRILTYYGRWTYKIEEAQRQGAAGILMVHTTESATYPWTTVQ
                     SSWTGPQVRIEQPPTSLVIAGWLNHDAAARLFSQAGQNLDSLSNRAAARGFEAVPLKT
                     GIETSVRSTITHSATSNVIARWAGRGNLRNEAVLIGGHYDHFGIGTPVAGDSIYNGAL
                     DNASGTAAVLTAAEAFVRSGVHAGRSMVFIGFTAEESGLLGSQALVTRPAIPLRDIAA
                     ILNMDVMNLYGQTRDVSALGLDQSSLGTVFGQAAAAEHLRVSTNQDALLRGSYFRSDH
                     FPFAKAGVPGTSIENGRDYVGQPADYGSKMEDEYTAKRYHQPSDELQPSFKYIGAVQQ
                     LRVIVRTAVAVGDATAQPTWNRTSEFRQAREERRKPH"
     gene            complement(1752..2486)
                     /locus_tag="VFD73_19205"
     CDS             complement(1752..2486)
                     /locus_tag="VFD73_19205"
                     /inference="COORDINATES: protein motif:HMM:NF005489.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZI76105.1"
                     /translation="MRVLIVGGTSAIASETAKRFAREGAHLFLTGRNTERLAAVADDL
                     RVRGAARVDTAVLDVADIASHRRVIESAVATLGGLDVALVAHGSLPDQRRCQEVVNEA
                     LEALHLNFTATIALLTLLANKLESQRSGCLAVITSVAGDRGRASNYVYGAAKGGVQIF
                     LQGLRARLLRANVAVVTIKPGFVDTPMTAGFKKNALFADAGRVGRGIHSAIKRRSDVV
                     YLPWFWRPVMTVLASLPERVFKRLHL"
     gene            complement(2483..>2809)
                     /locus_tag="VFD73_19210"
     CDS             complement(2483..>2809)
                     /locus_tag="VFD73_19210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76106.1"
                     /translation="AGSRETPSLAVLKRFGPIASPGLLSFPRPGITLAMDFAMRGSST
                     LDLLERLDRVVLDAGGAVYPAKDARMSAESFRRFFPQWTSFASQMDPQFSSSFWRRVT
                     AGAKTG"
BASE COUNT          545 a          873 c          868 g          523 t
ORIGIN      
        1 tcggagggca ggtccagaat cgctcccggg gtacggtagc aggattaagg cggcgggaag
       61 atagcgcaac aaacggagat agtggaaggg gcggcgcgac tcagactagt ggggcttccg
      121 ccgctcctcg cgggcctgcc ggaactcgga ggtccggttc catgtgggtt gggccgtcgc
      181 atcccctact gccactgctg tccggacgat gacgcgaagc tgctgtaccg cgccaatata
      241 tttgaaactg ggttgtagct catcgctggg ctggtggtaa cgcttggccg tgtattcatc
      301 ctccattttg ctcccgtaat cagcaggctg gccgacataa tcgcggccgt tctcgatcga
      361 ggttcccggc acccccgctt tggcaaaggg aaagtgatcg gagcggaagt aggagccgcg
      421 tagcagagca tcctgattcg tgctcaccct gaggtgttca gccgccgccg cctggccaaa
      481 cactgtgcct aaggaagatt gatcgagccc cagggccgac acgtcccggg tttggccgta
      541 aagattcatg acgtccatgt tcaagattgc cgctatgtcc cttaggggaa tcgcgggtct
      601 tgtcaccaat gcctgtgacc ccagaagtcc cgactcctcc gcggtgaacc cgatgaaaac
      661 catggagcgg ccggcatgca cgccgctccg gacaaaggcc tcagcggcgg tcagcaccgc
      721 cgcagttccg gacgcattat cgagcgcgcc gttgtagatc gagtctcccg ccaccggtgt
      781 gccgatgccg aagtgatcgt agtgtccgcc aatcagcact gcttcgttcc ggaggttccc
      841 ccgtcccgcc caacgcgcga tcacattgct cgttgccgag tgggtgatgg tactgcgaac
      901 tgacgtctcg atgccggtct tcagcggtac cgcctcgaag ccccgcgcgg cggcgcgatt
      961 gctgagacta tccagattct ggccagcctg agagaagagc cgagcagcgg catcatgatt
     1021 gagccacccc gcaatcacca gtgaagtagg gggctgttcg atgcggacct ggggcccggt
     1081 ccagctcgac tggaccgtcg tccacgggta agtggcgctt tcggtggtgt gaaccatgag
     1141 gatgccggcc gctccctgcc gctgggcttc ctcgatcttg taggtccacc ggccgtaata
     1201 ggtgaggatc ctgcctcgaa agattgtcga gtcacgaagt cccggatcgt tcactagcac
     1261 cacaacgatc ttgttcttga catccacgtt cttgtagtcg ttccactgat actccggcgc
     1321 gacgatcccg tagcccacga acaccagatc tccgctgact tgaaccgccg gttcgttgcg
     1381 catggaccag aggacgtaat ccttgcgata cgccagctct cccgtcgccg ctccggtcag
     1441 cttgacgact gggtcaggat tcagcgtgat gatggggact ctatggaagt aggttccgct
     1501 gtctccggcc ggctccaagc ccagccgctc aaactgggcg gcaatgtact tggccgccag
     1561 ctcacccccg cgggtgcctg gccggcgacc ctcgagcgcg tcatcggcca gaaatttgag
     1621 atgcgctcgg aagaccatcg agtccactgc cctcgcgacc tcggcggcag gggagggggt
     1681 ttgttgggcg cggatggttg tggtgccaaa cgcgagggca aagatgacgg gagtgactcg
     1741 catgcgaaat cctatagatg aagccgcttg aagacccgtt ccggaaggct ggccagcacc
     1801 gtcatgactg ggcgccagaa ccacggtagg tagacgacgt cgctgcgacg cttgattgca
     1861 ctgtggatgc cccggcccac tcgacccgca tcggcaaaga gggcgttctt cttgaagccc
     1921 gccgtcatgg gagtatcgac gaagccgggc ttgatcgtga cgacggcgac attggcccgt
     1981 aacagtcgtg cgcggagacc ctgaagaaaa atctgtactc cccccttggc ggcgccgtag
     2041 acataattgc tggctcgccc gcgatctccg gccaccgagg taatcaccgc cagacaaccg
     2101 ctccgctgag attccagctt gttcgcaagc aaggtcagga gcgcaatggt tgcagtgaag
     2161 ttcaggtgca acgcttccag cgcctcgttc acgacctcct ggcagcgcct ctggtcggga
     2221 aggctgccat gcgcaaccag cgccacgtcg agacctccga gagtggcaac ggccgactcg
     2281 atcacccgac gatggctggc aatgtccgcg acgtcgagca cggcggtgtc gacccgtgcg
     2341 gctccgcgaa ctcggaggtc atcggccact gcggccaatc gctcggtgtt tcggccggtc
     2401 aggaaaaggt gggctccctc acgcgcaaaa cgctttgcag tctcgctcgc gatcgcggag
     2461 gttccgccaa ctatgagtac tctcatccgg tctttgcgcc cgcagtgacc cgacgccaga
     2521 acgaggacga aaactgcggg tccatctgcg aggcgaacga cgtccattgc gggaagaatc
     2581 gacggaagct ctcggcactc attcgtgcgt ccttggccgg gtataccgcc ccacccgcgt
     2641 cgagaacaac gcgatccagg cgctccaaca gatccagagt gctgctgcct cgcatggcaa
     2701 aatccatggc cagcgtaatt cctggccgag gaaaggagag aagcccaggt gaggctatgg
     2761 gaccaaaccg cttgagaacg gccaacgagg gggtctcccg cgatcccgc
//
LOCUS       DASRPQ010001682         1343 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3960545, whole genome shotgun sequence.
ACCESSION   DASRPQ010001682 DASRPQ010000000
VERSION     DASRPQ010001682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1343
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3960545"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(203..739)
                     /locus_tag="VFD73_19215"
     CDS             complement(203..739)
                     /locus_tag="VFD73_19215"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI76107.1"
                     /translation="MPTADLRIERLASAELAPKTAKAIRELCDAAYEIHTAPYFDAIG
                     PGDHLLCWEGERLVSHLMWVTRWLQPDSGALLRTAYVEMVATAPDLQRSGYATSLLEH
                     FPSQVHDFDLAALSPATEALYSRLGWRYWQGPLAVRTDRGLLPTPDEQVMVLPTPRTP
                     LLDLNLPLSVEWRTGEVW"
     gene            complement(749..>1343)
                     /locus_tag="VFD73_19220"
     CDS             complement(749..>1343)
                     /locus_tag="VFD73_19220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76108.1"
                     /translation="ELERCSKDPRLRYGIKLHLGNSDVQLDNPAHVEQLGRVFRAANR
                     HRMAIVVHMRASISRHRPYGAAEARIFLEQLLPLVPDVPVQIAHLAGSGPGYDDPPAD
                     SAMAVLADAVQRHDPRTRHLWFDVATVVDRNISPAQAELVVKRIRQVGVDRVLYGSDA
                     ATGDNLRPKEGWAVFRRLPLREKEFRQIARNVAPYLR"
BASE COUNT          252 a          426 c          442 g          223 t
ORIGIN      
        1 agacggatag gccggctcca gttgtgagga caacaatggt ggccaccagg cggggagaga
       61 gcgaagagag cattcgggct ccgggtgagt caattcatgg tgaacgcctc aggatacggt
      121 ccggccgcct caaggcgcaa ccgccaagta tcccgattct cgacttcagg ccatgactcg
      181 cgactcgtga ctcgtgactc gtttaccaga cctcgccagt ccgccattct accgaaagcg
      241 gcagattcag atcgagcagc ggagttcgtg gcgtgggcag caccatcacc tgctcgtccg
      301 gcgttggcaa aagaccgcga tcggttctta cggcaagcgg cccctgccaa tagcgccagc
      361 cgagccggga gtacagcgcc tccgtggcgg gggagagtgc ggccagatcg aagtcgtgga
      421 cctgcgatgg aaagtgctcc agcagggagg tggcataccc gctccgctgc aggtccggcg
      481 ctgtggccac catctcgaca tacgcggttc ggaggagcgc gccgctatca ggctgaagcc
      541 accgggtcac ccacatcaga tgggagacga ggcgctcccc ctcccagcag agcaggtggt
      601 cacccggacc aatcgcatcg aagtaagggg cggtgtggat ctcgtacgca gcatcgcaca
      661 actcgcgaat ggcctttgcc gttttagggg cgagctcggc ggaagcgagc cgctcgatcc
      721 gaagatccgc cgtcggcatg cagcaatctc agcgaagata cggcgccacg ttccgggcga
      781 tctgccggaa ctctttctcc cggagcggga gccggcggaa cacggcccaa ccttccttgg
      841 ggcgaaggtt gtcgccggtc gccgcatcgg agccgtacag cacccggtct accccgacct
      901 gacggattcg cttcaccacc agctccgcct gcgccggtga gatgttccgg tctaccaccg
      961 tggcgacatc gaaccacagg tggcgggtgc gcggatcgtg gcgctggacg gcatcggcca
     1021 gaaccgccat tgcgctgtcg gcgggagggt cgtcgtatcc gggtccgcta ccagcgagat
     1081 gcgcgatctg aaccggtacg tcggggacca gcggcagcag ttgctccagg aagatccgtg
     1141 cttccgccgc accgtagggc cgatggcgtg agatcgacgc tctcatgtgt accacgatgg
     1201 ccatccggtg ccggttagcc gcccggaaca ctcggcccag ctgctcgacg tgggccggat
     1261 tgtcgagctg cacatcggag ttgccgagat ggagcttgat gccgtaacga agccgcggat
     1321 ccttgctgca gcgctccagc tct
//
LOCUS       DASRPQ010001683         2052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2105505, whole genome shotgun sequence.
ACCESSION   DASRPQ010001683 DASRPQ010000000
VERSION     DASRPQ010001683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2105505"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..982)
                     /locus_tag="VFD73_19225"
     CDS             complement(<1..982)
                     /locus_tag="VFD73_19225"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HZI76109.1"
                     /translation="MLVAGSIAATRRQYAELLAEARSRTLLLVSTLTAEQMAREPGAG
                     SASILAQLQGITAYESRLLLEETPDVSGLSSYDAWFDWMMDLRERVLQRLDEADLSES
                     AGLTEQYQKVLQREYHTDETILETIQLLGDPYDPPGRRELPRGRRLADPGFMTRFPGG
                     KVEIGDSIHSVSPFWIDVLPVTNGDYLTFMAAGGYTDREVWSEQGWEWLESSQAKMPE
                     YWSWEDGVWWSRCLLQETPLDLTRPVIHVSCYEAEAFARFVGKRLPSEHEWEAAAGWD
                     PETQSRRLYPWGNMAPTPHVANLDQLAFAPAPVGAFPGNLSPIGCYGMIGD"
     gene            1197..>2052
                     /locus_tag="VFD73_19230"
     CDS             1197..>2052
                     /locus_tag="VFD73_19230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76110.1"
                     /translation="MELLRNADLYDPEPRGRTHLLIGGETILWRGSDLPPLPSSLGVV
                     ERDMEGRRVIPGLIDIHVHLTGGGGEAGMHTRVPPLQLSRITAGGVTTVVGLLGTDDT
                     VRSPAEVLAMARGLIAEGLTAYCFTGGYHVPPVTITGSVRGDIVNIDLVLGVGELAIS
                     DHRSSQPTLDELLRIAGDAHVAGLMTGKAGIVHLHVGSGRRGLDLVRQALRESELPPS
                     VFNPTHVNRRRGLFDEALELAQQGSVIDITAFPVEKGEDAWSAPEALTRYLDAGLPPG
                     GVTISSDGG"
BASE COUNT          373 a          645 c          675 g          359 t
ORIGIN      
        1 catcgccgat catgccgtag cagccgatcg gcgacaggtt gccgggaaac gccccgaccg
       61 gcgccggcgc aaaggcgagc tgatccaggt tggcgacgtg gggagtgggg gccatgttgc
      121 cccacgggta caagcgccga gactgcgttt ccggatccca ccccgcagcc gcctcccatt
      181 cgtgttccga tggaagccgt tttccgacaa accgggcgaa tgcctcggct tcatagcagg
      241 acacgtggat caccggacgg gtgagatcca gcggagtctc ctgcaggaga cagcgactcc
      301 accagacccc atcctcccag gaccagtact ccggcatctt tgcctgagag ctctcgagcc
      361 actcccatcc ttgctcggac cagacctccc ggtcggtata gcctcccgcg gccatgaagg
      421 tcagatagtc gccgttggtc accggcaata catcgatcca gaaaggcgag actgaatgga
      481 tactgtcacc gatctccacc ttgccaccgg gaaagcgggt catgaagccg ggatcggcga
      541 gacgccggcc tcggggaagc tctcggcgcc cgggaggatc gtaggggtcg ccgaggagct
      601 gaatggtttc cagaatggtc tcgtcggtgt gatactcgcg ctgcagtact ttctgatatt
      661 gctcagtcag gccggcagac tcgctgaggt cggcctcgtc gagccgctga aggacacgct
      721 ctcgcagatc catcatccag tcgaaccatg catcatagga tgagagaccg gagacgtctg
      781 gtgtctcttc cagcaggagg cgggattcgt acgcagtgat tccctggagc tgcgcgagaa
      841 tcgatgccga tccggcaccg ggttctctcg ccatctgttc agcggtgagg gtactgacca
      901 gcaacaacgt gcgggatcga gcctcggcca gaagctcggc gtactgccga cgagttgctg
      961 cgatggatcc ggcaaccagc atagagggcc tgcacatcgg cggaatgctg cactcaccag
     1021 ccgatgaaat ctggccgagc cgactgagcg cgccaatggc ctgggtcact atcgggagat
     1081 aacttccgct cgccggtggg cattaggcac tgtactctcg cagtaggtcc ctcgctgcgc
     1141 tccactcgct ggatgggtcg gggcaggcgg gatgaggtcc gtgtgaaagg ttctgaatgg
     1201 aactgctgag aaacgccgat ctgtacgacc ccgagccgag gggtcgcact cacctcctga
     1261 tcgggggaga gacgattctt tggcgcgggt ccgacctgcc tcccctgccc tcgtcgctcg
     1321 gcgtggtcga gcgggatatg gaaggacggc gagtcatccc cggtctgatc gacattcacg
     1381 ttcacctgac cggcggcggc ggagaagcgg gcatgcacac tcgagtgcct ccgctgcagc
     1441 tgagccggat tacggcgggc ggggtgacga cggtcgttgg cctcctgggg accgacgaca
     1501 cggtgcgatc gccggcggaa gtgctcgcca tggcgcgcgg actcatcgcc gaaggcctca
     1561 ccgcttactg cttcaccggc ggctatcacg tgcctccggt gacgatcacc ggcagcgttc
     1621 gcggcgacat cgtcaacatc gacctggtgc tcggcgtggg agagctcgcg atcagcgacc
     1681 atcgctccag ccagccgacg ctcgatgagc tgctgcggat tgcgggggac gcgcacgtcg
     1741 ccgggctgat gaccggcaag gcgggcatcg tgcacctgca cgtcggaagt ggccggcgag
     1801 gactggatct cgtgcgccag gcactccggg agagcgagct gcccccgtcg gtgttcaatc
     1861 ccactcacgt gaatcgccgg cgaggattgt tcgacgaggc gctcgagctg gcccagcagg
     1921 gctcggtcat cgacatcacc gcttttccgg tcgaaaaggg tgaagacgcc tggtcggcac
     1981 cggaagcgct tacccgctat ctggacgctg ggctgccacc cggcggtgtc accatcagtt
     2041 ccgacggcgg tg
//
LOCUS       DASRPQ010001684         1022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4591619, whole genome shotgun sequence.
ACCESSION   DASRPQ010001684 DASRPQ010000000
VERSION     DASRPQ010001684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4591619"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..938)
                     /locus_tag="VFD73_19235"
     rRNA            complement(<1..938)
                     /locus_tag="VFD73_19235"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          164 a          365 c          268 g          225 t
ORIGIN      
        1 atgctccgcc gcttgtgcgg gcccccgtca attcctttga gttttagcct tgcggccgta
       61 ctccccaggc ggggtgctta atgcgttagc tccggcacag ggcgaatcaa tcgccgcccc
      121 acacctagca cccatcgttt acggctagga ctaccagggt atctaatcct gttcgctccc
      181 ctagctttcg cgcctcagcg tcaggacagg cccagagatc cgccttcgcc accggtgttc
      241 ctcctgatat ctgcgcattt caccgctaca ccaggaattc cgatctcccc tacctgcctc
      301 gagcccggga gtttggagtg cacgcccgag gttgagcctc gggttttcac accccacttt
      361 ccgggccgcc tacgcgctct ttacgcccaa tgaatccgga caacgctcgc cccctacgtc
      421 ttaccgcggc tgctggcacg tagttagccg gggcttcttc tgcaggtacc gtcactttcg
      481 cttcgtccct gccgaaagag gtttacaacc cgagggcctt catccctcac gcggtgtcgc
      541 tgcgtcaggc tttcgcccat tgcgcaagat tccccactgc tgcctcccgt aggagtctgg
      601 gccgtgtctc agtcccagtg tggctggcca cgctctcacg ccagctaccc gtcgtcgcct
      661 tggtaggccg ttaccccacc aacaagctga taggccgcgg gcccatccca ggccgtcgga
      721 gctttcctcg tcgtgccatg cgacacgacg agagtatccg gcattagcac ccgtttccgg
      781 gagttattcc agagcctggg gtaggttgcc cacgtgttac tcacccgttc gccgctccgt
      841 accggatcgg gttacccctc accggccgat cgctcgactt gcatgtgtta agcacgccgc
      901 cagcgttcgt cctgagccag gatcaaactc tccgtcaaga cctcgggatc ccccgctggc
      961 aagcgggttc gccctagatc ggagagctgc cgtcggaagt cactgacttc cgagggcaac
     1021 ta
//
LOCUS       DASRPQ010001685         1790 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_506873, whole genome shotgun sequence.
ACCESSION   DASRPQ010001685 DASRPQ010000000
VERSION     DASRPQ010001685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_506873"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1094)
                     /gene="wecB"
                     /locus_tag="VFD73_19240"
     CDS             complement(<1..1094)
                     /gene="wecB"
                     /locus_tag="VFD73_19240"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR00236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HZI76111.1"
                     /translation="MLALCFGTRPQVIKTAVLLPVLRSHWPVMTIDTGQHYDFELNRL
                     LYDQLRVPPADHFLEVGSAQPAEQVAAVLTRTAAVLRRHRPAAVVVIGDTNSTLGCAL
                     AAKKENLPLVHVEAGLRSNEPNLPEEINRRLVDAMADLLCAPSAASAARLESERLSGS
                     VVITGDVAYDVLRRNLELAPAPRTATPFALATIHRAALTDDPEALRSVIEALEQIGMP
                     VLFPIHPRTQLALRQFGLLERIPASVSTSAPLGYLDAIAAVRDANVVVTDSGGLQREA
                     YWLGTPCVTLREETEWGETVDCGANTLVPPLEARERLAEAVAQQCRRRGNHAWSKEAY
                     GDGNAAQKVADAIPLPRSAGTAQTSTRAPIA"
     gene            complement(1209..>1790)
                     /locus_tag="VFD73_19245"
     CDS             complement(1209..>1790)
                     /locus_tag="VFD73_19245"
                     /inference="COORDINATES: protein motif:HMM:NF020683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose oxidase early set domain-containing
                     protein"
                     /protein_id="HZI76112.1"
                     /translation="NATILPDGTVLVTGGTSACGFTDPSGGVFAAENYNPVTNSWSTW
                     ANASTIRVYHSTAMLLRDGRILYTGSGDGGGVPQQNNYEIFSPPYLFKGARPAYNLDS
                     AAVHYGQSFKVTTPDAASIQKVTLIRHSSTTHAFDAGQRLNTLSFTKAADGLSLTVTP
                     PASGRIAPPGPYMLFIVNSQGVPSVAQSVLLSP"
BASE COUNT          331 a          524 c          618 g          317 t
ORIGIN      
        1 gctatcggag cacgagttga tgtttgggcg gtaccggcgg accgaggtag aggaatagcg
       61 tcagccacct tttgcgccgc gttaccgtca ccgtaagctt ccttggacca ggcgtggttg
      121 cctctgcgcc ggcattgctg ggcaacggct tccgccagtc tttcccgagc ttccagcggt
      181 ggtaccaggg tattcgcacc acagtccacc gtctctcccc actcggtttc ttcccgcaga
      241 gtgacgcatg gtgtgccgag ccaataggct tcgcgctgca ggccaccaga atcggtcacc
      301 accacgttgg catcccgcac tgcagcgatt gcgtcgagat accccaacgg ggcactggtc
      361 gagacggagg ctggaatccg ctcgagcagc ccaaactgcc tcaaggcgag ttgggttcgg
      421 ggatggatcg gaaacagcac cggcatccca atctgctcca aagcctcgat gaccgagcgc
      481 agagcctctg gatcatcggt cagggccgcg cgatgtatgg tggcgagcgc aaacggagtc
      541 gcggtccgag gtgccggggc gagctcgagg ttacggcgca gaacgtcgta ggcgacatcg
      601 ccggtgatca ccacgctgcc ggacagacgt tcgctttcga gtctggcggc gctggctgcc
      661 gacggcgcgc agagcaggtc agccatggcg tcgaccagcc ggcgattgat ctcctcgggc
      721 aagttgggct cgttcgagcg gaggccagcc tccacgtgca cgaggggcag gttttccttt
      781 ttggcggcca acgcacagcc cagggtgctg ttggtatccc cgatgaccac gacggcggcg
      841 ggacggtggc gccggaggac ggctgccgtt ctggtgagca cggccgccac ctgttctgcc
      901 ggctgggccg agccaacctc gaggaaatga tccgccggcg gcaccctgag ctgatcgtag
      961 agcagacggt tcagctcgaa gtcgtagtgc tgcccggtat cgatggtcat gaccggccag
     1021 tgcgatcgca acaccggcag caagaccgcg gtcttgatga cctgagggcg ggtaccgaaa
     1081 cagagcgcca gcatcagccc agccgggggg tcacgaggcc gcagcggtgc accacgaaaa
     1141 ggtgcggcgc cgcggcatgg caacgccgca cccggtctcg gagagtgagc gtcaggtcgt
     1201 gaagtatttc acggtgacag aaggacgctc tgggcgaccg agggtacccc ctggctgttc
     1261 acgatgaaga gcatgtacgg gccgggtggg gcaatgcggc cggatgccgg cggcgtgacc
     1321 gtgagactca ggccatcggc tgccttcgtg aaggagagcg tattgagccg ctgccctgcg
     1381 tcgaaggcat gagtcgtgga gctgtgtcga atgagggtta ccttttggat ggaggcagcg
     1441 tcaggagtcg tgaccttgaa ggactggcca taatgcactg cggctgaatc caggttgtag
     1501 gccgggcgtg ctcccttgaa gaggtaaggt ggagaaaaga tctcgtagtt gttctgctgc
     1561 ggcaccccgc cgccatcgcc gctaccagtg tacagaatgc gaccatcgcg gagcagcatg
     1621 gcggtcgagt ggtagacccg gatagtgcta gcgttggccc aggttgacca actgttggta
     1681 accgggttgt agttctcggc cgcgaacacc ccgccggaag gatcggtgaa gccgcaggca
     1741 ctggtgcctc cggtgaccag cacggtgcca tcgggaagaa tggttgcgtt
//
LOCUS       DASRPQ010001686         1812 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3012632, whole genome shotgun sequence.
ACCESSION   DASRPQ010001686 DASRPQ010000000
VERSION     DASRPQ010001686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1812
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3012632"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            111..425
                     /locus_tag="VFD73_19250"
     CDS             111..425
                     /locus_tag="VFD73_19250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76113.1"
                     /translation="MKEEHRVGVQRGRRVRADVRQALLKSSSAHLYPGIPPGEWQPAG
                     VMVDLVLALKPGGRHPSPEGRNRVLDERHFEFRGRLSAGGQDDQRRFRQEDRRERQEE
                     EL"
     gene            535..1017
                     /locus_tag="VFD73_19255"
     CDS             535..1017
                     /locus_tag="VFD73_19255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76114.1"
                     /translation="MKLTPWLLGSLTTVALAACGGNKGNNDTGTARTSGTESGTMQGN
                     NATTADTGMAAMDTAGGGMSGMRSDTATGGARMHSDTGSMRSGTRMRSSSSTGSMSTS
                     RGADSAKGNQTKSGVTNTKTGKSTLGKGATRTRPDQGQPVTSKGDTVSSGPDSNATNR
                     "
     gene            1095..1517
                     /locus_tag="VFD73_19260"
     CDS             1095..1517
                     /locus_tag="VFD73_19260"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI76115.1"
                     /translation="MTQSLEVRSAPSILVVDDQPTVRRMAHRLLSEWGFRVFEAETGE
                     EAMEVLETARAGVQLVIVDVVMPLADGVQVTRHIQERWPGQRVLYMSAHPAEVLAQYG
                     LAELEVPFLAKPFTRDELLTKVSGALEQPAVKTPRQPR"
BASE COUNT          365 a          559 c          605 g          283 t
ORIGIN      
        1 cggatggact tcctccgggc tcgacccgct tgagtgacgc cggcgcagct cccgactcag
       61 agagctgagg caggcgcttc gctacggcgc ttcccagaaa gggcatggca atgaaggagg
      121 aacatcgagt cggcgtgcag cgcggccggc gggtgagagc cgatgttcgg caggctctcc
      181 tgaagtccag ctcagcgcac ctgtatccag gcattcctcc cggcgagtgg cagcctgccg
      241 gtgtgatggt cgacctggtg ctggcattga agccgggagg ccggcacccg agtccggaag
      301 gccgcaaccg agtactggac gaacgccact tcgagttccg cgggcgtctc tccgcgggag
      361 ggcaagacga tcagcgtcgt ttccggcagg aggaccggcg ggagcgccag gaggaggagt
      421 tgtaggcccc gagtccgggt gagcaacatc acctccggcg ctatgacggc tccctacctt
      481 cgctcaagac gtttgggggc aggatcaatt ctcggcgaac cgcgaggtga gtgtatgaaa
      541 ttgactccat ggctcttggg ctctctgacc acggttgctt tggctgcctg tggcgggaac
      601 aagggcaaca acgacacggg taccgcccga accagtggga cggaatccgg aacgatgcag
      661 ggcaacaacg ctacgacggc cgacacggga atggcggcca tggatacggc aggtggagga
      721 atgagcggca tgcgctcgga taccgccact ggcggcgctc ggatgcacag tgacaccggg
      781 agcatgcggt cggggaccag gatgcggtct tccagcagca cggggtccat gtcgacgagc
      841 agaggcgcgg attcggcaaa ggggaatcag accaagtccg gcgtgaccaa taccaagacc
      901 gggaagtcga cgctgggcaa gggagctacc agaacccgtc ccgatcaggg ccagcccgtt
      961 acctcaaagg gtgacactgt cagcagcgga ccggatagca acgcgaccaa tcgctaaccg
     1021 gcaaccggaa aacgcgcgga cgacaatccg cgccttttca gtcacaaccg aacgaaggtc
     1081 tcactcccaa ctgcatgacc cagtcattgg aagttcgaag tgcgcccagt atcctggtcg
     1141 tcgatgatca gcccaccgtc agacgcatgg cgcaccggct gctcagcgaa tgggggtttc
     1201 gcgttttcga agccgaaacc ggggaagagg caatggaagt gctggagacc gcccgtgcgg
     1261 gggtgcaact ggtcatcgtg gacgtcgtca tgcccctggc cgacggggta caagtgaccc
     1321 ggcacattca ggagcgctgg ccaggccagc gggtcctcta catgtccgcc catccagccg
     1381 aggtgttggc gcagtacggc ttggcggagc tcgaggttcc tttcctggcg aagccgttca
     1441 cccgggatga gctcctgaca aaggtgagcg gcgctctgga acagccagcg gtgaaaactc
     1501 cgaggcagcc tcgctagatc ccgtcccgcc cgacctcgtg gtgcacaagc cggctcgcga
     1561 gtgccttctt gcggagccgc atcctcctca cctctgcggc atcgtgcagg ctcggcgaaa
     1621 agcccaggcc gccgcagatg ccgggactct cgccaagccc gagtagccat tcaggaacgc
     1681 gcgcgaccca gggtgaagta gaatgtcgcg ctctggccga ccaggctctc agcccagacc
     1741 cgaccgccat gccggtggat gatgcgctgc accgttgcga gcccgattcc ggtgccggga
     1801 aattcactct gg
//
LOCUS       DASRPQ010001687         1020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_822448, whole genome shotgun sequence.
ACCESSION   DASRPQ010001687 DASRPQ010000000
VERSION     DASRPQ010001687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_822448"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          210 a          303 c          334 g          173 t
ORIGIN      
        1 ggcccagccg gcgggccgcg atggcccgca gctcgtcata gacccggtcg acgagcgtgc
       61 cgaaggccgt gccgctcccc tgccgccagg attgcagcaa cacggtgagc gaggagtccg
      121 gagtgggaag ggcttcggcg agctccaaca ttacgatcgt ctcttgagat aggtgcaagt
      181 cgcgccgttt tcatttcacg cggcaggggc caggcagggg aaagcggcct ctggcagagt
      241 caaacgtcct cgagcaggct caaaacgccg atagcaggct cgcggcggct ttagcattgc
      301 aaaaacgcga gttggctccg gcggaagcgc tctagcagac gaaaaacggc tccagcagcg
      361 tcggaagcgt tttagcaatg ctggacagcg ttttttgtcg ccaagaacgg gctctggcaa
      421 tctcggacgc gttccagcat tgctatctcg gctctagcaa tgcaaaaaga cgcgggacat
      481 tgctagctcg ggttttagca atgctaaagg cgttccggcg ctgctagagg agtttttacg
      541 gagttggagg agctccggcc gagatcgaga agcggcccgc aaggtcctgc atgaactccg
      601 tggcgcaccc ggcgtcccgc gagcccacca ggaagcaggg gatcagcttg gtatcggcat
      661 caaccgcagt gaaggccagg gagaggggcg gtcccggaat tgagaccgcc cccttgaacc
      721 ctaggcttgc tatgagacgt ggcgagctac gacgggcgcc ccggaggggt aggcgcgcaa
      781 ccccggcccc tcagccgttc cccggaagat cccaaaggga gccatgcccc ggaggtgagg
      841 acttcagagc gactccgaag tacctcggtg cggaaccgag gcagctcgga acggttcctt
      901 gcagtcttgg tcgagcagcc ccgcaggggc gacgggatgt agccccgggc gcaagcccac
      961 cctcttatac acaacttgta ctagacaagc gggtctttgt ctgctctcct gttccataga
//
LOCUS       DASRPQ010001688         1023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1130831, whole genome shotgun sequence.
ACCESSION   DASRPQ010001688 DASRPQ010000000
VERSION     DASRPQ010001688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1130831"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..>1023)
                     /locus_tag="VFD73_19265"
     CDS             complement(3..>1023)
                     /locus_tag="VFD73_19265"
                     /inference="COORDINATES: protein motif:HMM:NF024575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76116.1"
                     /translation="LEKQQDAVRVLQRSLARGRLGHAYLFHGSDLAELEAVARTLAKT
                     LSCERPVRGGEEGRAIDCCNQCLTCRKIDGENHPDVLWLRPESKSRVVRIEQIRDLLQ
                     TVYLKPTSAPLKVGVIVEADRLNIQAANAFLKTLEEPPADSILILLTLEPQRILETIL
                     SRCLRLNLAGESARHLDPAYVEWLRGFGQIAAQSQASLLGRYKTLSVILSKLAVLKES
                     VTERLTQRSPLESHDDIDPRLKEKWEDELSAAIEAEYRRQRSELLAGLQWWMRDVWLL
                     SLKLGGDFLTYPALAHLAEAVAARVTVQQAAENLDLLEKLQRQLTSNVQEALALEVGL
                     LRLKL"
BASE COUNT          188 a          338 c          300 g          197 t
ORIGIN      
        1 gctcagagct tcaagcgtaa cagcccgact tcgagcgcca gcgcctcttg cacgttggaa
       61 gtcaattggc gttgcagttt ctccagaaga tccaggttct cggccgcctg ctgaacggtc
      121 acccgggcgg ccaccgcctc ggccaggtgg gcgagcgcgg gataggtcag aaaatctccc
      181 cccagcttca ggcttaacag ccagacatcg cgcatccacc attgcaaccc ggccagcaac
      241 tcgctccgct gccgccgata ctccgcctca atcgccgcgc ttaactcgtc ctcccacttc
      301 tctttcaacc gcggatcaat gtcgtcgtgg gattccagcg gggatcgttg ggtcagacgt
      361 tccgtcacgg attccttgag caccgccagc ttggagagga tcacggacag ggtcttgtat
      421 cgccccagca ggctggcctg gctttgggcg gcgatttgcc caaaccctcg cagccactcg
      481 acgtaggcgg ggtccagatg gcgggcggat tcccccgcca gattgagacg aaggcaccgc
      541 gagagaatgg tctcgagaat ccgttgaggc tccaaggtca gcaggatcag gatggagtcc
      601 gccggcggtt cctcgagcgt cttgagaaac gcgtttgccg cctgaatatt gaggcgatcc
      661 gcctcgacaa tcacgcctac cttgagcgga gccgacgtcg gcttgagata gaccgtctgc
      721 agcaaatccc ggatttgttc gatccgaacc acccgggact tggattccgg gcggagccaa
      781 agcacatcgg gatggttttc accgtcaatc ttccggcagg tcaggcattg gttgcagcag
      841 tcgatggccc ttccctcctc tccgccccgc accggtcgct cgcagctcag ggtcttggcc
      901 aaggtccggg ccacagcctc gagttccgcc aaatcggagc cgtggaacaa gtaggcgtgc
      961 cccaggcgcc cccgggcgag gctccgttgc aatacccgca ccgcgtcttg ctgcttttcc
     1021 agg
//
LOCUS       DASRPQ010001689         1056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3365897, whole genome shotgun sequence.
ACCESSION   DASRPQ010001689 DASRPQ010000000
VERSION     DASRPQ010001689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3365897"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..957)
                     /locus_tag="VFD73_19270"
     CDS             complement(<1..957)
                     /locus_tag="VFD73_19270"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HZI76117.1"
                     /translation="MWTGVSIIMLLAGICAMVWWYASQKAAEPVGPIPATDPLAAWAA
                     TPSQRATLKYFWVVSGLILVQIIMGMITAHYGVEGDGFYGLKISHILPYSVSRTWHVQ
                     IGIFWIATAWLAAGLFIGPLISGKEPKFQALGVHVLFSALLLIVVGSLAGEWMSVQNK
                     LSDANAFLWGHQGYEYVDLGRGWQILLFAGLLIWLFLVIRATLPALKVNSEHRSLLYL
                     FLLSAGAIGLFYGAGLTWGQHTHLTIVEYWRWWVVHLWVEGFFEVFATTVIAFFFTRL
                     GLIRPAFAAKSALLSATIFLSGGIIGTCHHLYFSGTPTVALAF"
BASE COUNT          231 a          321 c          343 g          161 t
ORIGIN      
        1 gaaggccagg gcgacggtcg gcgtccccga gaagtacagg tgatgacagg tgccgatgat
       61 gcctcccgaa aggaagatcg tcgccgagag caatgccgac ttggcggcga aggccggacg
      121 aatcagccca agccgcgtga agaagaatgc gatgacggtg gtggcgaaga cctcgaagaa
      181 cccttccacc cagagatgca ccacccacca gcgccagtac tccacgattg tcaggtgcgt
      241 gtgctggccc cacgtcagac ccgctccgta gaagagtccg atggcgccgg cggaaagcag
      301 gaaaaggtag agcaggctgc ggtgttcgct gttcaccttg agagccggaa gcgtggcccg
      361 gatcaccagg aataaccaga tcagcaatcc agcgaagagc agaatctgcc agccgcggcc
      421 gagatcgacg tactcgtagc cctgatgtcc ccacaagaac gcgttggcgt cggagagctt
      481 gttctgcacg ctcatccatt cgccggccag ggagcccacc acaatcagga gcagggcgct
      541 gaacagaacg tgtacgccga gcgcctgaaa cttcggctcc ttgccgctga tcaagggacc
      601 gataaagagg ccggcagcga gccaggccgt cgcgatccag aagatgccga tctgcacgtg
      661 ccaggtgcgc gacacgctgt agggcaggat gtgcgagatc ttgagtccgt agaacccgtc
      721 gccctccacg ccgtaatggg cggtgatcat tcccatgatg atctgcacca ggatcaggcc
      781 tgagactacc cagaagtatt tgagggtggc gcgctgcgaa ggggtcgcgg cccaggcggc
      841 gagggggtcg gtagccggga tcggacccac gggttcggcc gccttctggg aggcgtacca
      901 ccacaccatg gcgcagatgc ccgccagcag catgatgatg ctgacgccgg tccacatcac
      961 actctcaccg gtggggcgat tgccgacctg gggctcgtac ggccaattgt gcgtatagga
     1021 gaccgtatct cccggccttt cggcagccgc cgacca
//
LOCUS       DASRPQ010001690         1027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4264939, whole genome shotgun sequence.
ACCESSION   DASRPQ010001690 DASRPQ010000000
VERSION     DASRPQ010001690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4264939"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          173 a          323 c          325 g          206 t
ORIGIN      
        1 gcttcaaggt gttcggtgag ctgaatgcct gcctccgagc agcgcaggag cttcgccagt
       61 ccggcttgcg gtgttcaagc ggtcggcgtg gcgagcttgg catcgcgtag ttggggggcg
      121 gaacgattga cagcgcgagg tgctggcgtt ggctcgctgc ggcccggatc gccccccatc
      181 ccaagcgcag cgggtagccc ccggttcacc gccggggctt tttctttgcg cagcgtactc
      241 cgccttgaga gctgactatg ggtgctgtgg cgccgagagt acgggtgttg atctgccgca
      301 atgctgatgg gtcgagtcag ctcatcacgg ggcatgccgg atccgccgct acaggatagc
      361 actctcaagt gctcgcaatg cgcacggccg ctgacctacg tgcgcacgat gtggtgtgct
      421 ttcgagctga agatcgacgt gtggggatgt gagcctcgcc agcgcatcgt gcggacaccc
      481 tgcatcgaga cgaagcacta agtccgtctt gcccccagcg gtatgacaag cccgccggcg
      541 aagtgaacag cttcacttcg tgttcccgga acgttcactt aagtcgcact cggcctcgtt
      601 ccctacagac ccacgcgagc atgcgtaagg accatgccgc catcctgagg cgccggcctt
      661 ctcgcccttc tcgcctttga gtaacataag cgacaatcaa gtccgagccc gagaatgctc
      721 catgccgcac gcaattcttc ttgttgtcct ccttcccgcc ttcaccatgg ctatcgcagg
      781 cgcactgtgc gaccggccat tcgtaggtga tgagtcgcga acccgagccg acacaagggg
      841 ccagggtcgc taaccgcgcc gtaggctgtc acccctcttg cctgctaccg cagccccgag
      901 ctgttggagg gttcgcgggc tcttagggct aatgctgagc tggcggtaga ccagtccggg
      961 ggaagcggcc ggtgtcggtg ctcgctcgaa tgacgactcc cagtgactca caggaggccg
     1021 tggagtc
//
LOCUS       DASRPQ010001691         1344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1470224, whole genome shotgun sequence.
ACCESSION   DASRPQ010001691 DASRPQ010000000
VERSION     DASRPQ010001691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1344
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1470224"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(55..936)
                     /locus_tag="VFD73_19275"
     CDS             complement(55..936)
                     /locus_tag="VFD73_19275"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HZI76118.1"
                     /translation="MGETQAPLQLLSAFVAVAEQASFTKAAHKLGVGKGTVSRAVSEL
                     ERQLGTELLHRTTHTVALSTAGVALYERAAPHVAALNAAVLKLPESAVEPSGELRITA
                     PNDLGVAVLPELLVQFARRYPKISLDVWLTNTNVDLVREGFDLALRAGSALKDSTLTS
                     RRLAGGRVGFFASPEYIARRGKPKHLNDAAHDWLLHRAVRNAKPFQAGTPRFLCDDML
                     LLRELARRGAGIAMLPESFAAPYVQDGSLEEVPVSLPDSISGGLFLVYPSSGEVPRKV
                     RAFRDFLLEWLKKLPFA"
     gene            1090..>1344
                     /locus_tag="VFD73_19280"
     CDS             1090..>1344
                     /locus_tag="VFD73_19280"
                     /inference="COORDINATES: protein motif:HMM:NF024953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HZI76119.1"
                     /translation="MSAIAGSAQSAAVVSSPRSKGLHIGLWVAQVVLALVFAMAGVPK
                     VAKSFADVSQDVPFLATLPGALVRFIGVSELVGAVGLILPA"
BASE COUNT          241 a          432 c          433 g          238 t
ORIGIN      
        1 aacctcccct gccacggcca cgccggatgc ttcacgcacc agaaggctta gccatcatgc
       61 gaaggggagc ttcttcagcc actcgagcag gaaatctcga aacgccctca ccttccgggg
      121 cacctcaccg ctggaggggt agaccagaaa cagcccgccc gaaatgctat caggcaagga
      181 gaccggcacc tcttcgaggg acccgtcctg cacatacggc gcggcaaacg actcaggcag
      241 catcgcgatg ccggcccccc tccgcgccag ctcgcgcaag agaagcatgt catcgcatag
      301 aaagcggggg gtgcccgcct gaaatggctt cgcgttccga accgcccggt gaaggagcca
      361 gtcgtgggcg gcatcgttta ggtgcttggg cttgccgcgc cgggcgatgt actcgggcga
      421 ggcgaagaag ccgacgcggc ctcctgccag tcttcgggag gtgagggtcg agtccttcag
      481 ggcggagcca gcgcgcaggg ccaggtcgaa accttctctt acgagatcga cgttggtgtt
      541 ggtcagccag acgtccaggc tgatcttcgg gtagcggcga gcaaactgca cgagcaactc
      601 cggcagtacg gcaacgccaa ggtcgttagg cgccgtgatc cggagttcac cggacggctc
      661 gaccgcgctc tcgggaagtt tgagcactgc agcattgagc gcagccacgt gtggcgccgc
      721 gcgctcgtag agggccacgc ccgcggtcga gagagctacc gtgtgcgtgg tgcggtgaag
      781 cagttccgtg cccagctggc gctcgagctc ggaaaccgcg cggctcacgg tccctttccc
      841 aactccaagc ttgtgcgccg ccttggtgaa actggcctgc tccgcgacgg ccacgaaggc
      901 ggacagcagc tggagcggcg cctgtgtttc tcccatggga aacctcgaaa agctacgcca
      961 cccggtgtgg tggcggcaag ctcgtgttcc atttccagaa cagcatgttg tctaacatga
     1021 cgttgtttca agtgcgagac ggacgcatcg tacatcgcag tcgcagcgat caacgtggag
     1081 gcttgagaaa tgtcagccat cgccggcagc gctcagagtg cagcggtcgt ctcttccccc
     1141 cgaagcaagg ggcttcacat cggtttgtgg gtggcgcagg tcgtcctggc cctcgtcttc
     1201 gccatggctg gggtccccaa ggtggccaag tccttcgcgg acgtctcgca agacgtgccc
     1261 ttccttgcca ccctgcctgg agcgctggtg cgcttcattg gggtctccga gctcgtcggc
     1321 gcggtcgggc tcatcctccc tgcc
//
LOCUS       DASRPQ010001692         1045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4592516, whole genome shotgun sequence.
ACCESSION   DASRPQ010001692 DASRPQ010000000
VERSION     DASRPQ010001692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4592516"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..998)
                     /locus_tag="VFD73_19285"
     CDS             complement(<1..998)
                     /locus_tag="VFD73_19285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76120.1"
                     /translation="MTLAPGNSELRDFLDRVAPEWNRTPRTRVRPATLQVVARTRRRE
                     FQIFTAGGWRDFYVRGVNLGVALPGRYASEFPADSARYAGWLDTLSAMHANTLRIYTI
                     LDPAFYRALRGWNLAHPNRALWLIHGVWAELPPKQNFRDSQWNADLRKELARVVDVIH
                     GAASIPPRPGHASGHFDADVSSWVLAYIVGREWEPFAVKSFDATNPVSSFSGRYLRTI
                     DAPAMDVWLTQQCDFMLEHEAQTYNALRPIAYTNWPTLDPLRHPTEATTAEEAAWRKR
                     TGRRSVGTKLEYENDAVSLDANLVSTTDLNPAGWFASYHAYPYYPDFVFLDPQYQAA"
BASE COUNT          201 a          316 c          337 g          191 t
ORIGIN      
        1 gccgcctgat actgtggatc gaggaacacg aagtcgggat agtagggata tgcgtgatag
       61 ctggcgaacc agccggcagg attcagatcg gtggtgctga ccagattggc gtcgagactg
      121 acagcgtcat tctcgtactc gagctttgtc cccaccgacc gccgcccggt gcgcttccgc
      181 cacgcggcct cctcggctgt ggtcgcctct gtcggatggc gcagagggtc gagcgtcggc
      241 cagttggtgt acgcaatcgg ccgcagagca ttgtacgtct gagcttcgtg ctccagcatg
      301 aagtcgcatt gctgcgtcag ccagacgtcc atcgctggag cgtcgatagt ccggagatat
      361 cggccggaaa acgagctgac cgggttcgtg gcatcgaaag actttacggc aaacggctcc
      421 cactcccggc ccacgatata cgccagcacc caggacgaga catcggcgtc gaagtgaccc
      481 gaggcgtgac cgggccgagg cggtatgctc gccgctccat ggattacgtc gacaacccgg
      541 gccagctctt tccggaggtc ggcgttccac tgagaatctc tgaagttttg cttcggcgga
      601 agctcggccc acacgccatg aatcagccac agggctcggt tggggtgcgc gaggttccag
      661 ccccggagtg cccggtagaa ggccgggtcg agaatggtgt agatccgaag agtattcgcg
      721 tgcatggcgg atagcgtgtc cagccatccc gcatatctgg ccgaatcggc aggaaactct
      781 gaagcgtatc ggcctgggag ggcgaccccc agattcactc cgcgaacgta gaaatcacgc
      841 cagccaccag cggtgaagat ctggaactcc cgtctcctgg tccgcgcgac tacctggagt
      901 gtggcaggcc gaaccctggt gcgtggagtg cgattccatt ccggggcgac ccgatccaga
      961 aaatcacgga gctcgctgtt gcctggggcg agagtcaacg cgcgccttcc cgcctcaatg
     1021 gcggaggctg tgtcggccaa cctca
//
LOCUS       DASRPQ010001693         1806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2741135, whole genome shotgun sequence.
ACCESSION   DASRPQ010001693 DASRPQ010000000
VERSION     DASRPQ010001693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1806
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2741135"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..755)
                     /locus_tag="VFD73_19290"
     CDS             complement(<1..755)
                     /locus_tag="VFD73_19290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76121.1"
                     /translation="MSGWVPPLPKHFPVLRLETIRSKILVFALLVTLVPSGLTAWISY
                     RQNRNALEEKISQELLSSSSQAAREMDVWLKERLYDLRVFASSYEVSEKFTGSRKPAS
                     SSHDRLSDYLNSVRDRFGEYQDLVVLDPRGRLVAATSSDQRSALRLPADWAKELSSNG
                     AVVGTATWDSSLQKGVLVVAVPVERGEGRMLGVMAARLNLRGAEKGLRAFAPRGGQVT
                     LMTVTGGIMASSGESSAELMKTTVNARSLDQLKS"
     gene            complement(902..1267)
                     /locus_tag="VFD73_19295"
     CDS             complement(902..1267)
                     /locus_tag="VFD73_19295"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI76122.1"
                     /translation="MARRILVVDDEPMVRALIARALGDAGYEVVAVANGQAALDAARG
                     AEAPFDLIVTNNYMPGLSGAELVAKVRQDFPQLPILHVDDVARRKRVGGHGESVPTIY
                     KPFSVAALQDAVRKLLLVH"
BASE COUNT          346 a          592 c          541 g          327 t
ORIGIN      
        1 gatttcaact gatccagcga ccgagcattc accgtggtct tcatcagctc ggcagagctc
       61 tcgccggagc tcgccatgat tccaccggta accgtcatca gggtgacctg accgccccgc
      121 ggcgcgaacg cccggaggcc cttttccgcc ccgcgcaggt tcagtcttgc cgccatcacg
      181 cctagcatcc gcccttctcc acgctccacc ggcaccgcca cgacaagaac tcccttttgc
      241 agactagaat cccaggttgc ggtgccgacg actgcaccgt tgctactcaa ttctttggcc
      301 caatcggccg gcaggcggag cgcgctacgc tggtcggagc tggtcgccgc taccaggcgg
      361 ccacgtgggt cgagcacgac gagatcctga tactcgccga accgatcccg aacggagttg
      421 aggtagtcgc tgaggcgatc atgcgagctg gaagccggct tcctgctgcc ggtgaacttt
      481 tcggagactt catacgagct ggcgaacacg cggaggtcat acaaccgctc tttgagccac
      541 acatccattt cccgcgctgc ctggctgctg gaactgagca gctcttggga aattttttct
      601 tccagcgcgt tccgattctg cctataagaa atccaggcgg tcagccctga cggaaccaac
      661 gtcaccagga gagcaaagac caggatcttg ctgcggatcg tctcgagccg cagcacgggg
      721 aagtgcttgg ggaggggggg gacccagccg ctcaaccaga ctccttgttc gagaggacag
      781 gctgcccgag ctaagcagat cccaggccat cacctaactc ctcttttcac aaggcggtag
      841 ccctgcaagc cgggaccgag ggggcggtgc cctgcggggg gtgtcgcagt tttcagggtg
      901 actagtggac cagaagcaac ttccggacgg cgtcctgcag agcggcgaca ctgaacggtt
      961 tatagatcgt cgggacactc tccccgtggc cgccgacgcg cttgcgtcgg gcaacatcgt
     1021 cgacgtgcag aatgggcagc tggggaaaat cctgccggac cttggccacg agctcggcac
     1081 cgctgagccc gggcatgtag ttgttcgtga cgatcaaatc gaagggcgct tcggcacctc
     1141 gggccgcatc cagggctgct tggccgttgg caaccgccac cacctcgtat cccgcatccc
     1201 ccaacgcccg ggctatcagc gctcgaacca tgggctcgtc atcaaccacg agaatgcgcc
     1261 gggccattcc aagggttccg cgagaaggtg tcgattggtg gactaccatc atactgctcg
     1321 ccgggggcac gcgcgagtcc cttgcaagga gcggccgcgg gataacctgt tacgcagtcc
     1381 atacacgagt gcgcttgacc ctgccccgtc acctggccta gcttccgcag gtcaaggcca
     1441 acgacggaaa tcgccgtgaa cggacgcgaa cacatttcgg cccaccgcaa tcccaatcgc
     1501 cccactctcc ggcgttgcgt cagcacgcgc cagggggaac ggagttcggg tcgagtatag
     1561 caaacagcac tgccctgtcc cggcccgctc ctcggaggag cgggcctttt ttgtttgagg
     1621 aatcccgtgt ggagaggggg atgacgaatc cagtgccaga gtcaccgatg cttcaagtac
     1681 agtacgcgga aatcagcgac gctcgaaagc tcggcaccct ggtcgaggtc agccaatctc
     1741 tggccgctca tcccgggctc gcggccagcc tttcggcggt cctggagaca ctcgcgctcc
     1801 gctgtg
//
LOCUS       DASRPQ010001694         1224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3671008, whole genome shotgun sequence.
ACCESSION   DASRPQ010001694 DASRPQ010000000
VERSION     DASRPQ010001694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3671008"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            382..1116
                     /locus_tag="VFD73_19300"
     CDS             382..1116
                     /locus_tag="VFD73_19300"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZI76123.1"
                     /translation="MVNVHIHEFRGGGAVVDAAAMEQFQTQWATYQKLVDHDLLSHRA
                     VGNLLGSALKRYQRPFSIIDIACGDASLMKHVLPATRVGHYHGIDLAEPALELAAKNL
                     AGMAFAVDLDHRDFVEAVNDRPEPADVSWCSLSIHHLPTEDKLHLLKAVRGATASFLM
                     IYEPTRLDHEDRGSYLDRFVRINRPLWTMLTHDEWKQIEHHVRTADLPETSAVWLDLG
                     REAGFSRADQVFVDPTDFYRLYRYDD"
BASE COUNT          216 a          388 c          375 g          245 t
ORIGIN      
        1 aagcgggatc gctctctgcc gagcttgcaa cgctctccgg atcaagccga acggggcttt
       61 accccagctt ggcaggagca cagaccgcac ccgattgcgg ttcattgcag gatccccaca
      121 gcacgctccg cgaccaggct cctaaagcaa gtctcaccct cggaatagtg ccttcctgtg
      181 gcctcacccc atgaagggtg tctggaagta actcgcggcc aagggcacgc cgtttgggcc
      241 gcgcctgcag tgctggcggg cctcccagag cccgtggtat cctcggcgcg ccgaagcaag
      301 cccggacctt gggcttgccg cgtgcccgga agctcatcgt cctctcatgt cgcacggcgc
      361 gggcgttcgt ggaggatcag cgtggtcaat gtccatatcc atgagttccg gggcggcggt
      421 gccgttgtcg acgccgcggc catggagcag ttccagacgc aatgggccac ttaccagaag
      481 ctggtcgacc atgatctgct gtcccataga gcggtcggca acctcctcgg ctcggcgctg
      541 aagcgctatc agcggccatt ctccattatt gatattgcct gtggcgatgc gagcctcatg
      601 aaacatgtcc tgcccgcaac cagggtcggc cattatcacg gcattgatct cgcggagccg
      661 gcgctggaac tggcagccaa gaacctggcc ggcatggcct tcgccgttga cctcgatcac
      721 cgcgattttg tcgaggcggt gaatgatcgg cccgagcctg ctgatgtgtc ttggtgcagc
      781 ctgtcgatcc atcatctccc gacggaggac aagctgcacc tgctaaaggc cgttcgcggg
      841 gcaaccgcct cattccttat gatctacgag ccgacgcgcc tcgaccacga ggacaggggt
      901 agctaccttg accgcttcgt gcgcatcaac cgcccgcttt ggacgatgct gacgcatgat
      961 gaatggaagc agattgagca tcatgtccgg accgccgacc tgcccgagac cagcgcggtg
     1021 tggctcgacc tgggccgtga ggcgggcttc tcccgcgcgg atcaggtgtt cgtcgatccg
     1081 actgacttct atcggctcta tcgttatgac gactagagtg cacttgcccg ggcctggaac
     1141 gggttgagct ggatgatctc gaacagccgt gaggtccggc gcatctgggt cttctcatga
     1201 gcctgcaggt tgctgacagg ctgc
//
LOCUS       DASRPQ010001695         1473 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1471396, whole genome shotgun sequence.
ACCESSION   DASRPQ010001695 DASRPQ010000000
VERSION     DASRPQ010001695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1473)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1473)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1473
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1471396"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(668..1204)
                     /locus_tag="VFD73_19305"
     CDS             complement(668..1204)
                     /locus_tag="VFD73_19305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76124.1"
                     /translation="MGSKLRLMTALPLAAIAVALLASATPAQAAPHRAAAVVSGAGWA
                     GRAVPRSASGVCGYITDPIYTVSAPAVQLDPFYHRVIGTAGINVWAKMNCSATVIFKL
                     ETKVCGFWGCNSHEMASSQAMELPESGPVTSELVANCRPGTNSYQMVYRVTWVDYAGD
                     SLERHTDENASNWVKGSC"
BASE COUNT          291 a          446 c          451 g          285 t
ORIGIN      
        1 caagcccggg accacgccga gttgatcatg tctagataac gatcgattct cgacgggggc
       61 cggatccggc gaccgccagt acatgatctc cgcgggcggg gaccctggaa gcatttgaac
      121 gctggccgct atctcacgcc cagactgcgg gcttccgtcg gccaggctga cggaggcgat
      181 ggcggcggac cccgcgagga cgccattagc gctgaagatt ccctgccatc taccgaaagt
      241 caaaacctga cgcccgcgat gcgcctggcg cagcgcgctg atgtgtaggg gttacggccg
      301 tttcccctac accgatatga ccagcagcct gatcagatta tcgctagcgc caacagctgc
      361 gcgtatcctc cccgaacccg ttgaattatc tgggccgcgg tggtccgatt gggacgtgca
      421 gttgcttgcc agcagacgaa gttctaccgt gacgagaacg tgacccaacc tcgcgcccat
      481 ataacgactt tccttcgtgg caggtcgatc gacggcggcg atgaggtcat gggcatcaag
      541 gagatcttgg ttgggcctgt tccaaggcaa gttgagggct ccgacggaat cacgtccgga
      601 ttccgtcgga gccttcacct gcgagaggca gcaactaccg ctagctggtg agtctggcca
      661 gcatggatca gcagctgcct tttacccagt tacttgcgtt ttcatcggta tgccgctcca
      721 ggctatcccc tgcataatcg acccaggtca cgcggtagac catctggtag gagttggtac
      781 cgggacggca gtttgcaacc aactcactcg tgacaggtcc ggattcaggg agctccattg
      841 cttgcgacga tgccatctca tgagaattgc atccccagaa tccacacacc ttggtttcga
      901 gcttgaagat gaccgttgcg ctgcagttca tcttggccca gacattgatc cccgcagtgc
      961 cgatgacccg atgatagaac ggatcgagct ggacggcggg agcagacacc gtatagatag
     1021 gatcggtgat gtacccgcac acgccgctgg cagatcttgg gaccgcgcgg cctgcccatc
     1081 ccgcaccgct aactaccgcc gcggcacgat gcggtgccgc ttgggcagga gtggctgagg
     1141 cgagcagtgc gactgcaatt gcggccagag ggagagcggt catcagacga agcttggagc
     1201 ccatggatcc tcctacttaa ttcggattgc tcttcatctc cgatgctcgt ggcgcgccct
     1261 gcggcacgac cacgcatcca ctgcgattgt cacctacagg aagcagccga taacatactg
     1321 ctagccgagg ctggcggtcc ggatagccgc gacacagtcc cgggttttcc gtgaccacgg
     1381 gtagttacga gcgtgcatgc tgggggggtg cctgagatcg tcgtagatgg gcgcgctgaa
     1441 cagcggccgg ccgctgccat cggccggcgg acg
//
LOCUS       DASRPQ010001696         1005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_508551, whole genome shotgun sequence.
ACCESSION   DASRPQ010001696 DASRPQ010000000
VERSION     DASRPQ010001696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_508551"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(413..>1005)
                     /locus_tag="VFD73_19310"
     CDS             complement(413..>1005)
                     /locus_tag="VFD73_19310"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI76125.1"
                     /translation="VFALPFVKIDHVFRELSSPGLLPTMLAMKTKERGPMGSVLLDRR
                     ERCGYTQDELARRAGLDTSSIGAYERGERKPKGEKLARVCVALGLEPEAFFEEVAQAE
                     AQALKPLMDKVRKDMGEVAPSTTGDPDLEPYRQAWEVCSGVWRDAFLLAARLSRLGDP
                     KGAGGLDSLVQFFTKVNQTIPVNPGEPKPPGSQEPG"
BASE COUNT          174 a          325 c          318 g          188 t
ORIGIN      
        1 gcaggatcgt cggataccgg gtgttgcgcg acccggactc ggcggcgctg atcgtgcttt
       61 ccgacaggcc gcactgcttc gccagctcct tctgggtcat ccccctctga agcctcagca
      121 ccctgagatc cctggcaacg gatttggagt tcatcggcgg gcatcgtagc cgccggctga
      181 tcagggatca aaggagatgt aaaggttaaa tctttcctgg cctgatgatt tccgcacact
      241 ggcgcgcagt tatcctgcgc gcgaaggtcc gccatcctcg aaagtcggaa tcggctcgca
      301 cagtttccac gaatttgccc cgcgaggtca tttgatcccg agaggcaggg cgagttcgcg
      361 ggaactggtc cggcggcggg ttgtgaagcg ggatcttcgg cctggatcgg gatcagcccg
      421 gttcctgcga gccgggcggc ttgggctccc cggggttcac ggggatcgtc tgattgacct
      481 tcgtgaagaa ctggacgagc gaatcgaggc cgcccgcacc tttcggatct ccgaggcgag
      541 acagcctggc ggcgagcaga aaggcgtccc gccagactcc ggagcagacc tcccacgcct
      601 gccggtaggg ttccagatcg ggatccccgg tggtcgaagg cgctacctcg cccatgtcct
      661 tgcggacctt gtccatgagc ggcttcagag cctgggcctc ggcctgggcg acttcctcga
      721 agaacgcttc cggctccagg cccagggcga cacagacgcg ggccagcttc tctcccttgg
      781 gcttgcgctc cccccgctcg taggcaccga tcgagctggt atcgagaccc gctctccggg
      841 cgagctcgtc ctgggtgtag ccacagcgct cgcgacggtc cagcaagacg ctgcccatgg
      901 gcccacgctc cttcgtcttc atggcgagca tcgtagggag gagccccggg gaactcaact
      961 cccgaaaaac gtgatcgatc ttcacgaaag gcagagcaaa tactc
//
LOCUS       DASRPQ010001697         2035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_824097, whole genome shotgun sequence.
ACCESSION   DASRPQ010001697 DASRPQ010000000
VERSION     DASRPQ010001697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_824097"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..391
                     /locus_tag="VFD73_19315"
     CDS             <1..391
                     /locus_tag="VFD73_19315"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HZI76126.1"
                     /translation="DGVARIKLGLASEIRLGNLEARRDWGYAGDYVDAMWRMLQQPSP
                     QDYVVGTGQTHSVRELVETAFAHVGLDWRKYVVSDPKYMRPAEVDVLQANPAKAKKEL
                     GWTPTVDFTQLVGMMVDADLERLRGSR"
     gene            405..1355
                     /locus_tag="VFD73_19320"
     CDS             405..1355
                     /locus_tag="VFD73_19320"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HZI76127.1"
                     /translation="MKVLVTGADGFVGRHLVPRLVSRGYQVVAGCRPDFSPVNTADRL
                     TWEGVPLIPFELTDPDRIQAAVSPGQDIVIHLAAVSSVRDAREDPGRAWLVNAAGTSR
                     LVNAVDAARRADRTNPLVLIISTAEVYGCGTARPRLETDVPRPQSTYAASKLGAEIAG
                     LEVWRRTGLRVVVARPFTHTGPGQAAGFVVPSFIRRLLAIKSGDSPQVPTGNLDPIRD
                     FLDVRDVVDAYLHLVEAGSPGEIYNVARGEGISLRDLFFRVAELIGVDAEPIPDPALV
                     RSADIPHLVGNADKLRETTGWSPSTPLDQTLLDMLNAQTH"
     gene            1339..>2035
                     /gene="carB"
                     /locus_tag="VFD73_19325"
     CDS             1339..>2035
                     /gene="carB"
                     /locus_tag="VFD73_19325"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683457.1"
                     /note="four CarB-CarA dimers form the carbamoyl phosphate
                     synthetase holoenzyme that catalyzes the production of
                     carbamoyl phosphate; CarB is responsible for the
                     amidotransferase activity; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl phosphate synthase large subunit"
                     /protein_id="HZI76128.1"
                     /translation="MPKRTDLSSILLIGSGPIVIGQGAEFDYSGTQAVRALKEEGYRV
                     VLVNSNPATIMTDPELADRTYIEPVTPEWVAKVIERERPDALLPTMGGQTALNVAMAL
                     ERDGTLQKYGVELIGASERAIRLAEDREEFAQAMRRIGLATPPGRTVHTLEDALDAVE
                     STGYPAILRPSFTLGGSGGGIAYNREEFEILVRRGLELSPVGSVLVERSIIGWKEFEL
                     EVMRDGADNVVIVC"
BASE COUNT          366 a          625 c          680 g          364 t
ORIGIN      
        1 ggacggagtg gcgcggataa aattggggct cgcgtcggag atccggctcg ggaacctgga
       61 agctcgccga gactggggct acgcgggtga ctacgtggac gcgatgtggc gcatgctgca
      121 acagccttcg ccccaggatt atgtcgtcgg caccggccag acccacagtg ttcgggagct
      181 ggtcgagacg gcctttgcgc acgtcgggct ggattggcgg aaatatgtgg tcagcgatcc
      241 caagtacatg cgtcctgccg aagttgacgt tctgcaggcc aacccggcaa aggccaaaaa
      301 ggagctgggc tggactccaa ccgtagattt cactcagctg gtggggatga tggtcgacgc
      361 cgatctcgag cggctgcgcg gcagccgatg atcgtgggct aagcgtgaag gtcctggtca
      421 ccggtgcaga cgggttcgtg ggacgtcact tggtaccacg tctggtcagc cggggatatc
      481 aggtcgttgc agggtgccgg ccagacttca gcccggtgaa caccgcggat aggctgacgt
      541 gggaaggcgt tccccttatc ccgttcgagc tcaccgatcc cgaccgcatc caagccgccg
      601 taagccccgg ccaggacatt gtcattcacc tcgctgccgt atcatccgtt cgagacgctc
      661 gcgaggatcc gggccgcgcc tggctggtga atgccgctgg cacctcgcga ctggtcaatg
      721 cggtcgacgc agccaggagg gcagaccgca ccaatccact ggttctcatc atctccaccg
      781 ccgaagtgta tggctgtggg acggcacgcc cgcgcctgga gaccgatgtt ccgcgcccgc
      841 aatcgaccta tgccgccagt aagctggggg cggaaatcgc cggtctcgag gtctggcggc
      901 gaaccgggct gcgggtggtg gtcgccagac cgttcaccca caccgggccc gggcaggccg
      961 ccgggtttgt ggtgccctcc ttcatccgtc ggcttctcgc gatcaaatcc ggagactcgc
     1021 cgcaggtgcc gactggcaat ctcgatccga tccgcgattt tctcgacgtg cgcgacgtgg
     1081 ttgacgccta ccttcacctg gtggaggccg ggagcccagg cgagatctac aacgtcgccc
     1141 gtggggaggg tatcagcctg cgggatctgt tctttcgggt ggcagaactg atcggagttg
     1201 atgcggagcc gatccccgat ccagcgctgg tacgctccgc cgacatcccc catctggtcg
     1261 gaaacgcgga caagctccgg gagaccaccg gctggtcgcc ttccactcca ctggaccaaa
     1321 cgctgctgga catgctgaat gcccaaacgc actgacctct cgagcatcct cctgatcggc
     1381 tcgggcccga tcgtcatcgg ccagggcgcc gagttcgact actccggcac ccaggcggtg
     1441 cgggcgctca aggaggaggg ataccgggtc gtcctggtca actcgaatcc agccacgatc
     1501 atgaccgacc cggagttggc tgatcgtacc tacatcgagc cggtcacccc cgagtgggta
     1561 gcgaaggtga tcgagcggga gcgccccgac gccctgctcc cgacaatggg tggacaaacg
     1621 gccttgaacg tcgccatggc gctggaacgg gatgggacgt tgcagaagta cggagtggag
     1681 ctgatcggag ccagtgagcg cgccattcgc ttggcggagg atcgggagga gtttgcccaa
     1741 gccatgcgtc ggatcggtct cgccactcca ccgggacgaa cagtccatac cctcgaggat
     1801 gcgctggacg cggtggagtc caccggctac ccggccatcc tccgcccttc attcaccctg
     1861 ggcggatcag gcggcggcat cgcgtacaat cgggaggagt tcgaaatcct ggtgcgccga
     1921 gggctcgaat tgtcgccggt gggatcggta ctggtcgagc gaagcatcat tggctggaag
     1981 gagttcgagc tcgaagtcat gcgagatggt gccgacaatg tggtgatcgt ctgct
//
LOCUS       DASRPQ010001698         1021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2741940, whole genome shotgun sequence.
ACCESSION   DASRPQ010001698 DASRPQ010000000
VERSION     DASRPQ010001698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2741940"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1021
                     /locus_tag="VFD73_19330"
     CDS             <1..>1021
                     /locus_tag="VFD73_19330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76129.1"
                     /translation="RLLLAESRIQPLLLVFEDLHWVDAESQLFLNVLVDSLPTARILL
                     LVNHRHEYQHTWGHRTYYTQFRIDALPEESATELLRALLGPDPGLDPLRRLLIRRTEG
                     NPFILEESVRALVETGALTGERGAYRLVRAVDALQIPATAHAIIAARIDRLSPEHKRL
                     LQAASVIGKDVPLALLQAIVGLDEGVLGSGLRELQATEFLYETRLFPDAEYTFKHALT
                     QEVTYGSLLQDRRRTLHASIVEAIEGLNAGRLGEQVELLAHHAVRGEAWEKAARYLRE
                     AGTKAFLRSANTDAVGYLTKGLEVLDMLPESPSRDREELASLLTLGPALHAVKGLGAP
                     EAERVF"
BASE COUNT          185 a          329 c          318 g          189 t
ORIGIN      
        1 acgcctgctg ctggccgaga gccgcatcca gccgctcctg ctggtctttg aggacctcca
       61 ttgggtcgat gcagaatcgc agctcttcct gaatgtgctg gtcgatagtc tgccaactgc
      121 tcgcatcctg ctcctcgtca accaccgaca cgagtatcag cacacctggg ggcacaggac
      181 ctattacact cagttccgta tcgacgcgct gcccgaggag agcgcgacgg aactcctgcg
      241 agcgctgctt ggaccggatc cggggctcga tccgctgcgg cggcttctga taaggcgcac
      301 cgagggtaat ccattcattc tcgaagagag cgttcgggca ctcgtcgaga caggggcact
      361 taccggagag cgcggcgcgt atcgtcttgt gcgcgccgtg gacgccctgc agatccccgc
      421 cactgcgcac gccattatcg ccgcccgcat tgaccggctt tctcccgagc acaaacgcct
      481 gcttcaggct gcttcggtga tcggcaagga tgtgccgctt gctcttcttc aggcaatcgt
      541 cggcctggat gaaggcgtcc tgggcagcgg cctcagagag ctccaggcca ccgaattcct
      601 ctacgagacc cgactctttc cagatgcgga gtataccttc aagcatgcgc tcacgcagga
      661 ggtgacatac ggctctctgc tccaggaccg gcggcgcacg ctgcacgcca gtatcgttga
      721 ggccatcgag gggctcaatg ccggacgatt gggcgagcag gtagaattgc tggcccacca
      781 tgccgtccga ggcgaagcct gggaaaaagc cgcgcgctat ctgcgggagg ccggaaccaa
      841 ggcgttcctg cgctccgcca atacggatgc cgtcgggtat ctcacgaagg ggcttgaggt
      901 gctcgacatg ctgccggaga gccccagccg tgacagggaa gagctggctt cgctgctgac
      961 attgggcccg gccctccacg cagtgaaagg gctcggtgcc ccggaagccg agcgcgtgtt
     1021 c
//
LOCUS       DASRPQ010001699         1052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3671575, whole genome shotgun sequence.
ACCESSION   DASRPQ010001699 DASRPQ010000000
VERSION     DASRPQ010001699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3671575"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="VFD73_19335"
     CDS             <1..238
                     /locus_tag="VFD73_19335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76130.1"
                     /translation="MRSSLRAVALLSDGASRLADRFHVTDWAGILKILQEQSPQELIK
                     QVRAAEHADPRGERWPRGKTYDDATAVYAVVGNQ"
     gene            377..607
                     /locus_tag="VFD73_19340"
     CDS             377..607
                     /locus_tag="VFD73_19340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76131.1"
                     /translation="MTDPAATSTQFSRIFYAVEYMANLEGQDKALVVEMSQDMLNDVI
                     EGRGLKPLAEYIRRYCDVIDSEADAERIASEI"
     gene            686..982
                     /locus_tag="VFD73_19345"
     CDS             686..982
                     /locus_tag="VFD73_19345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76132.1"
                     /translation="MTRNDNNAAGQAADIPDLAELADRIDVVLAYPWIDRAGFLRDAM
                     QGLKRAAQVLPAVPLLGQLLAGTRGASEPVRSRLAPKIGHRPKRIANRRSLDSL"
BASE COUNT          192 a          346 c          334 g          180 t
ORIGIN      
        1 gatgcggagt tccctgcggg ccgtcgcgct actcagcgac ggcgcgagtc gactggcgga
       61 ccgcttccat gtcaccgact gggctggcat cctcaaaatt ctccaggagc aaagtccgca
      121 ggaactaatc aagcaggttc gcgccgccga acatgcggac ccccgcggtg agcgctggcc
      181 ccgcggcaag acttacgacg atgcaaccgc cgtgtacgcg gttgtcggta atcagtagcc
      241 tcaaccggcc gtctaccccc cttgacgttt cgctgtgagt tgccatacct tggtcgtgta
      301 gccccctaga cgatcccaag cgttagcggt ccataacgta taggggggta gacgatctgc
      361 aagtggagtg acctgcatga ccgaccccgc cgccacatca acgcagttca gcaggatctt
      421 ctacgccgtt gagtacatgg cgaacctgga aggccaggac aaggccctgg tggtcgagat
      481 gtctcaggac atgctcaacg acgtgatcga gggccgcggc ctcaagccgc tggccgagta
      541 catccggcgc tactgcgacg tgatcgattc cgaggccgac gcggagcgca tcgcaagtga
      601 aatctgaggg ttgccccggg gcggtcttgc ctgccagctt cgcccgcccc ggagcttcct
      661 tcccagcaag gaaggcattt tcatcatgac acgcaacgac aacaacgcgg cagggcaggc
      721 cgcggacatc cccgacctgg ccgagctggc cgaccgcatt gacgtggtgc tggcctaccc
      781 gtggatcgac cgcgccgggt tcctgcggga cgcgatgcag gggctcaagc gggccgcgca
      841 ggtgctgccc gcggtgccgc tgctcggcca gctgctggcc ggtacccggg gcgccagtga
      901 gcccgtccgc tcccgtttgg ctcccaaaat cggacaccgg ccgaagcgca tagcaaaccg
      961 caggtcactc gatagcctgt gacctgcggt ttcggtgtcg gggtggggag atttgaactc
     1021 ccggcctctt cgtcccgaac gaagcgcgct gc
//
LOCUS       DASRPQ010001700         2943 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_509014, whole genome shotgun sequence.
ACCESSION   DASRPQ010001700 DASRPQ010000000
VERSION     DASRPQ010001700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2943
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_509014"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..923
                     /gene="hemH"
                     /locus_tag="VFD73_19350"
     CDS             <1..923
                     /gene="hemH"
                     /locus_tag="VFD73_19350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HZI76133.1"
                     /translation="GGSPILRHTEAQGRGMVARLDRLSPGTAPHKFYVAFRYARPKSE
                     DALRQMRDDGIERAIAFTQYPQFSCSTTGSSLNELWRAAARTGLEDAFTWSLIDRWPV
                     HPGFIEAMSETVRQGLDRFAPEDRHKVILLFSAHSLPLDVIDRGDSYPQEVGASVQAV
                     VEHLALPNPYLLAYQSDVGPVRWLGPSTAEVIRRLGRRGHRHLLVIPIAFTSDHIETL
                     SELDREYGEIAHQVGITTYVRAPALNDRPRFLDAMAEIVRDHLDSGLPYSSQYPLRCA
                     GCSNPECRNVLHPAGSTAGAQVFRLPVNPK"
     gene            complement(933..2120)
                     /gene="hemA"
                     /locus_tag="VFD73_19355"
     CDS             complement(933..2120)
                     /gene="hemA"
                     /locus_tag="VFD73_19355"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: protein motif:HMM:TIGR01035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HZI76134.1"
                     /translation="MQQDLSFHVVGLSHHTASVAEREPLSLSSAECAALLSACQRVGS
                     SALILSTCNRLELYWTGSPNQAVWFYDLLRSRGATAPLTQIAGHDAVRHLFRVAAGLD
                     SQILGETEILGQVRRAYDAARKAGTTTREMDLIFSAALAAGRRVRRETMLGRHPASVA
                     SAAVELAAHHWGSIGARDVVVLGAGEAAEGVLRALHEQQASAVTLLSRHPERAQALAS
                     AWGARVGELAELSRRLVQADLLFVATASARPVVTAAELAAIMSARDSRELIVMDLAVP
                     RNVEPQAREIEGLLLYDLDDLQRLCCPGAEAGLVKLEEVEQVIEDELARLGLNLRGRL
                     VAPQLAELHRIGVELAEQESSWALAQLETLSESQREVVRQMADRLVRRVLYPVSRNLR
                     QSS"
     gene            complement(2245..2823)
                     /locus_tag="VFD73_19360"
     CDS             complement(2245..2823)
                     /locus_tag="VFD73_19360"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HZI76135.1"
                     /translation="MAISRYRDPSLFGLQRLNRILDEAFGASGLPEQNSVITSTLFAP
                     TDVSEDATSLQISMELPGVQPDDVRLSLENNILTIRGEKRQESDENNERVHRFERVYG
                     VFERTFALPNTVDPDKIEARFENGVLLVRIPKAERARPREIRVSTSASGTSQVRSGAQ
                     SQRVTGQSSQRSGGRNGGEKDAEEEGSAAKNR"
BASE COUNT          570 a          966 c          864 g          543 t
ORIGIN      
        1 gcggaggctc tccaattctc cggcataccg aagcccaggg acgcgggatg gttgcccggc
       61 tggaccgact ttcgcccggg acggctcctc acaagttcta tgttgccttc cgctatgctc
      121 gccccaagag cgaggacgcg ctccgccaga tgcgggacga tggcatcgag cgggccatcg
      181 cattcactca gtacccccag ttttcctgca gcaccacggg ctcgagcctc aacgaactct
      241 ggcgggcggc ggcacggacc ggactagagg acgcgttcac ctggagcctg atcgaccggt
      301 ggccggtaca tccaggattc atcgaggcga tgagcgaaac cgttcgccag ggtctggacc
      361 gctttgcgcc ggaggatcgc cacaaagtca ttctcctctt cagcgcccac tctctgccct
      421 tggacgtgat cgatcgtggc gattcgtatc cccaggaggt cggcgccagc gtccaggcgg
      481 tggttgagca tctggcgctt ccgaacccct atctcttggc ctatcagtcc gacgtcggtc
      541 cggttcgctg gctcgggccc agcaccgcgg aggtgattcg tcggctcggc cgtaggggac
      601 accgccacct gctggtgatc ccgattgcgt tcaccagcga tcacatcgag accctctccg
      661 agctggatcg cgagtatggg gaaattgccc atcaggtggg aattacaacc tatgtgcgag
      721 cgccggcact gaacgatcgg ccacgattcc tcgacgccat ggccgagatc gttcgagatc
      781 acctcgattc cggactaccc tacagctcgc agtatccgct ccgctgtgcc ggatgcagca
      841 atccggaatg ccggaatgtt ctgcatcccg cagggtctac cgccggagct caggtatttc
      901 ggctcccggt aaatccaaag tgatatgagg gattagctgg actgccgaag attacggctc
      961 actggataca gtactcgcct gactaaccgg tccgccatct gcctcaccac ttcacgctga
     1021 gattccgaca gcgtctccag ctgagcgaga gcccaggagg attcctgctc tgccagctct
     1081 acaccaatcc ggtgcaactc agccagctgg ggagcgacca gccggccccg cagattgagt
     1141 cccaaacggg ccagctcgtc ttcgatcacc tgttcgacct cctccagctt cactaggcca
     1201 gcctccgctc ctgggcagca gaggcgctgg agatcatcca ggtcatacag gagaagacct
     1261 tcgatctcgc gagcctgcgg ctcgacattt cgaggcaccg caagatccat gacgatcagc
     1321 tcccgtgaat cgcgagcgct catgatcgcg gcaagctcag cggcggtgac caccgggcga
     1381 gccgaggccg tagccacgaa cagcaagtcc gcctggacca gccgacgaga gagttccgcc
     1441 agctccccga cccgagcgcc ccatgcagac gcgagcgcct gggccctttc cggatggcgg
     1501 ctcaggagcg tgaccgcaga ggcctgctgc tcgtgcaacg cccggagtac cccttccgcc
     1561 gcttctccag cgccgagcac cacaacgtcg cgggcgccga tcgagcccca gtgatgcgcg
     1621 gcaagctcca ccgccgcaga agcaaccgat gccggatgtc ggcccagcat cgtctctcgt
     1681 cggactcgtc ggccggcggc caacgccgcc gagaagatca gatccatctc tcgcgtcgtg
     1741 gtaccggcct tccgcgccgc gtcgtacgct cggcggacct ggccgagaat ctctgtttca
     1801 cccaggatct gagagtcgag acccgcggcg acgcggaaca gatgccgcac cgcatcgtgc
     1861 cccgcgatct gggtcagtgg ggccgtggcc cctcgggacc gaagcagatc atagaaccac
     1921 actgcctggt tgggcgagcc agtccaatac agctcgagac gattacatgt ggagaggatc
     1981 aaagcagaac ttccgacccg ctggcaggcc gaaaggaggg cggcacactc tgccgatgac
     2041 aacgagagcg gttcccgctc tgctaccgaa gcggtgtgat gactgaggcc aacgacatga
     2101 aacgaaaggt cttgctgcac aaccaacggt agggaggaag aaaaagggag acaatccgcg
     2161 attcttcgga ggcgcgctcc gtattcctac ggagtcgccg ccctcccctg gccggagcca
     2221 ggggaggcga ctccagaact caggtcagcg gttctttgct gccgagcctt cctcttcggc
     2281 atctttctcg ccgccattgc gtccgccgga gcgctggctg ctctgtccag tgacccgctg
     2341 gctttgtgca ccgctccgga cctgggaggt tcccgaagca gatgtgctta cgcgaatctc
     2401 ccgaggacgc gcgcgctccg ccttcggaat tctcaccagc aggacgccat tctcgaatcg
     2461 ggcttcgatc ttatcgggat cgaccgtgtt gggtaaagcg aaggtccgct cgaatacccc
     2521 gtagacccgc tcgaaccggt gcaccctttc attattctcg tcggattcct gccgcttctc
     2581 accccgaatg gtcaggatgt tgttctccag cgaaagacgc acatcgtccg gctgaacccc
     2641 aggaagctcc atgctgattt gaagcgacgt tgcatcctcc gacacatcgg ttggagcaaa
     2701 caacgtcgag gtgatgacgc tgttctgctc cggaagcccg gaggccccaa acgcctcgtc
     2761 caggattcgg ttcagtcgct gcagcccgaa aagactggga tcgcgatagc gtgagattgc
     2821 catgtttgtt ctccttctaa gctgtagaag ccccaagttg tcgaccgcct gctcgtccta
     2881 tatcagcggc atcgtgttgg ggtggaagca ccagctatgc caagagatag gctggtaaaa
     2941 atg
//
LOCUS       DASRPQ010001701         1079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_207950, whole genome shotgun sequence.
ACCESSION   DASRPQ010001701 DASRPQ010000000
VERSION     DASRPQ010001701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207950"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..373
                     /locus_tag="VFD73_19365"
     CDS             <1..373
                     /locus_tag="VFD73_19365"
                     /inference="COORDINATES: protein motif:HMM:NF014731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HZI76136.1"
                     /translation="PMRVPGTAVYLTTQRDVVPAALALNLKHNGVLHDRVVLLKVSTS
                     RTPRVAETERVQVKDLSGGMRRVELTFGFAEKPDVPSALAAQTRLAATRPPRRSFSAA
                     RSPSPRCSLRCRFGRSEYTPS"
     gene            complement(522..>1079)
                     /locus_tag="VFD73_19370"
     CDS             complement(522..>1079)
                     /locus_tag="VFD73_19370"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HZI76137.1"
                     /translation="VPVQPPDIATMNHAHSTHYTDAPDPRIAHVLRGWRSDGSPGEID
                     LTVGDMHVSNLPTNIRDWQGGTERYGNSIFVFESAGVCIAHLSHLHHLLTEQDLVLLG
                     HIDVVMAPVDGVYTLSQQDVAAVLEQIHPRLVLPMHWFTREVVEHFVSLMAGRYDVRW
                     KGEQTLLMSRATLPERPTIVVLGDN"
BASE COUNT          189 a          383 c          314 g          193 t
ORIGIN      
        1 cccgatgcgg gtccccggca cggcggtcta tctcacgacg cagcgtgacg tggtgccggc
       61 ggccttggcg ctgaacctca agcataacgg cgtgctgcac gaccgggtcg tgttgctcaa
      121 ggtgagcacc agccgcacgc cgcgtgtggc ggagacggaa cgggtccagg taaaggacct
      181 ctcgggtggc atgaggcggg tggagctgac atttggattt gccgagaagc cggatgttcc
      241 cagcgcgctg gccgcccaga ccaggttggc tgcgacccgt ccaccgcgtc gttctttctc
      301 ggccgcgagg tccccgtccc ctcgctgcag cctgaggtgc cgatttggca ggagcgagta
      361 tacgccttca tgacgcgcaa cgcggttagc gctcccgact acttcctgat cccgccgccg
      421 cgggttgtcg aactcggcac caaagtggag atttagccca acttgaacat ccactggcgt
      481 tggctcttag ccaatgccac agcgatccgc tgcaaccgct cctagttatc gcccaacact
      541 acaatcgtcg gcctctccgg caacgtcgcc cgcgacataa gcagcgtctg ctcccccttc
      601 caccgcacgt cgtaccgtcc ggccatcagc gacacgaaat gctccaccac ctcccgcgtg
      661 aaccagtgca tcggcagcac cagcctcggg tgaatctgct ccagcaccgc cgccacgtcc
      721 tgctggctca gcgtatacac cccatccacc ggcgccatca ccacatcgat gtgccccagc
      781 agcaccaggt cctgctcggt cagcagatga tgcaggtgcg acaggtgcgc gatgcacacg
      841 ccggcgctct cgaacacgaa gattgagttg ccgtagcgct ccgtcccgcc ctgccagtct
      901 cggatgttgg tcggcaggtt cgacacatgc atgtcgccca ccgtcaggtc gatctccccc
      961 ggactgccat ccgagcgcca tcctcgcagc acatgcgcaa tccgcggatc aggcgcatcg
     1021 gtatagtgcg tcgagtgcgc gtggttcatc gtcgcgatat ccggcggctg caccggcac
//
LOCUS       DASRPQ010001702         1101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4593805, whole genome shotgun sequence.
ACCESSION   DASRPQ010001702 DASRPQ010000000
VERSION     DASRPQ010001702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4593805"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..975
                     /locus_tag="VFD73_19375"
     CDS             <1..975
                     /locus_tag="VFD73_19375"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI76138.1"
                     /translation="AEEPMSKTVSQRPAPGLRGEEAIPLAPPRSTRTPLGWWRNPWRR
                     PYIIATVTWMYLAWSLLPVLIAIGISFSAGRSNAVWQGFSTQWWWGHPASDPSGALLV
                     SPELHAALIQSLRLSFLTMFIAVPIGVAFAIGISRWRGPAPAGANFLMLFSFVIPEIV
                     IGISMFLFFTYLLKFVHLGTGAQLLSLVTYQVSYPVIIVRARMLSIGKEYEEAATDLG
                     ASPTQAVRRVLLPLLYPAILVSFVLVFADTIDDFITVRYLSGGASTEPLSVKIYNFSR
                     GSLTPAINAAATFLLFSTLVIAVIGVFLYRRITRGQRGQTKEMTDYLT"
BASE COUNT          178 a          366 c          317 g          240 t
ORIGIN      
        1 gcagaggaac caatgagtaa gacggttagc cagcggcccg cacccggtct ccggggggag
       61 gaagctatcc ccctggcgcc ccccaggagc accagaacgc ctctgggatg gtggcgaaac
      121 ccctggcgcc ggccgtacat cattgccacc gtcacctgga tgtacctcgc gtggtccctg
      181 ctgccagtcc tgatagccat tgggatctcg ttcagcgcag gacgatcgaa cgccgtctgg
      241 caaggattct ccactcagtg gtggtgggga caccctgcat ccgacccatc cggggcgctg
      301 ctcgttagcc cggaactgca cgcggcgctg atccagagcc tgcgcctctc gttcctcact
      361 atgtttatag cggtgcctat cggcgtggct ttcgcgatcg gcatatcccg ctggcgcggg
      421 ccggcgccgg ccggcgccaa cttcctcatg ctgttctcat tcgtgatacc cgagatcgtc
      481 atcgggatat ccatgttcct gttcttcacc tacttgctga agttcgtgca tctcgggaca
      541 ggtgctcagc tgctctccct ggtgacctac caggtctcct acccggtgat catcgtccgg
      601 gcccgcatgc tatcgatcgg caaggaatat gaggaagcgg cgacggatct tggcgcctcc
      661 ccgacccagg ccgtccgcag ggtcttgctg cccctgctgt accccgcaat cctggtcagc
      721 tttgtcctgg tgttcgccga cacgatcgac gacttcatca ccgtccggta tctgtccggt
      781 ggtgccagca ctgaaccgct gtcggtgaag atctacaact tttcgcgagg gtcgctcacg
      841 ccggctatca acgccgccgc taccttcctt ctgttctcga cgctcgtgat cgctgtcatc
      901 ggggtgtttc tctatcgtcg aatcacgcgc ggccagcggg gccagaccaa ggaaatgact
      961 gactacctga cctgaggtcc ccggaggcac ctcagtgttc acagggtgga gacgcagcgt
     1021 gtcctggttc ttcaccgttg cgctagttcg ccctcctgat gaccagagga agcggatggc
     1081 gccttttcct cgccggtcac t
//
LOCUS       DASRPQ010001703         1587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3962967, whole genome shotgun sequence.
ACCESSION   DASRPQ010001703 DASRPQ010000000
VERSION     DASRPQ010001703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3962967"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..415
                     /locus_tag="VFD73_19380"
     CDS             <1..415
                     /locus_tag="VFD73_19380"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI76139.1"
                     /translation="PARRVSRAPRPERGTIVPTILVVDDDADVANVISDMLTTRGYRV
                     LTETEPGEAIRLVDAGRDPIDLLVTDIVMRGMHGHELAESLRDRWPRMKVLFMTGYPA
                     EELRNHRVPLFGARVLTKPLAVDTVVDAVRGILGA"
     gene            complement(746..1171)
                     /locus_tag="VFD73_19385"
     CDS             complement(746..1171)
                     /locus_tag="VFD73_19385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76140.1"
                     /translation="MRIGVKIGVPAPPPVVVTPPVVVTPPVVVAPPAPVVVVPPVAPP
                     VIVRAPQLVVVPGSPVFYAPGVEMNFFAYGGRYYSFHHDRWFVAPRPGAPWVAIAPGR
                     VPQPVLGVPVAYYKVPPGHAKKIDRGHGCPPGLAKQGRC"
BASE COUNT          310 a          487 c          541 g          249 t
ORIGIN      
        1 gccggcgcgg cgcgtgagcc gagcacccag acccgaacga ggaaccatcg tgccgaccat
       61 ccttgtggtt gatgacgacg ccgacgtagc aaacgtgatt tcagacatgc tgaccacgcg
      121 agggtacagg gtgctgactg agaccgaacc cggcgaggca atcaggctcg tggatgcagg
      181 ccgcgacccc atcgacctgc tcgtgactga tatcgtgatg cgcgggatgc acggccacga
      241 attggcggag tcgctgcgcg atcgatggcc ccgaatgaag gtgctgttca tgacggggta
      301 tccagccgag gagttgagga accatcgtgt gcccctgttc ggggcacgag tgctgacgaa
      361 gccgctggcg gtagacacgg tggtcgatgc agtgcgtggg atactcggtg cgtaaatgat
      421 cgagcgtttt ccggggcgcc tcccggacgg tagcatccct tctcccgcca ggtctggcgg
      481 cggtcagccc tacacggcgc agagctacca gaggtggtgc gagcacaccc aggagatcat
      541 cccgttcccg ctggaggatg gttcagcttg tctttggaag tgatggggga cgacggcgtg
      601 agggcgccca gcgcttagcc tagggccgtg gcctcgcccc cgggtccaga caagagagaa
      661 cccgaagggg gcgacctcca gtgaggaggt ccgtcccctt cgggcaattg atgagctacg
      721 tgatggaagc gcgccgagca gcggcttagc agcgcccctg cttggccagc ccaggtggac
      781 agccgtgccc tctatcgatc ttcttggcgt ggcccggtgg gaccttgtag taggcgaccg
      841 gcacgccaag gaccggctgc gggacgcggc cgggtgcaat cgcgacccag ggagcgccag
      901 gcctcggggc tacgaaccac cggtcgtgat gaaagctgta gtaccgcccc ccatacgcga
      961 agaagttcat ctcgacaccg ggcgcataaa acaccggcga cccgggcacc accacgagtt
     1021 ggggcgcgcg cacgatcacg ggcggtgcaa ccggggggac gacgacaaca ggcgccggcg
     1081 gtgccaccac cactggaggt gtcacgacca ccggaggcgt cacaacgacg ggcggcggag
     1141 ccgggacgcc gatcttgact ccgattctca cgctatccgc ttcagctgaa ccggcaaggg
     1201 ccaaaacgga cactgcagtc aatgccagcg ttcggatttg cattagctcg gacctccagg
     1261 agagagactg tagtcattgc aacagcgcct ggaggtgcaa gcccgcagcc aaacagctga
     1321 gccgaacgct ctcctgtgtt tatcaccgga tacagactct agatgcgagc actgtcagcc
     1381 tggtgtcagg ccgtgacctt cccttcttac ccatcagcac cacgtcgcac ccagagaccg
     1441 gatgatggag ccgcggatga gcgaggccgg ggagcggcgc gctgtcatcg agggccgcct
     1501 gaaacacgac gccctcctgg cctgggccag gagggcgcgg tgtttactga cgttggttgc
     1561 aggcaggtga ggcccggcgc ggcaagg
//
LOCUS       DASRPQ010001704         1005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2387138, whole genome shotgun sequence.
ACCESSION   DASRPQ010001704 DASRPQ010000000
VERSION     DASRPQ010001704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2387138"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..562
                     /locus_tag="VFD73_19390"
     CDS             <1..562
                     /locus_tag="VFD73_19390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76141.1"
                     /translation="TRWQTCRLSWYGGEVRRLQLATGTAVWYRGGKPPVTLRWVLVRD
                     PKQRFEPQALLSTDLTLSARQIVLYFVRRWSMETTFQEARLYLGLEGQRQWNDLAAAR
                     TTPVRLGLFSLVALIVQRQPGWQGAFRRSAWYEKPRPTFADALAQVRRALWRQLGFWL
                     SEAAIEKQKPAQVLFEHFAELLAYVA"
BASE COUNT          178 a          327 c          313 g          187 t
ORIGIN      
        1 cacccgttgg cagacgtgcc ggctcagctg gtacggcggc gaggtccgtc ggctgcagtt
       61 ggccaccggc accgccgtgt ggtatcgcgg gggcaagccg ccggtgaccc ttcggtgggt
      121 gctggtgcgc gatcccaaac agcgctttga accccaagcg ttgctctcga ccgacctgac
      181 gttgtcggcc cgccagatcg tcctttattt cgtccggcgt tggtcgatgg agaccacgtt
      241 tcaggaagcg cgcctttacc tggggctgga aggccagcgc caatggaatg acttggccgc
      301 cgctcggacg accccggtcc ggttaggcct cttttcgtta gtcgccctca tcgtccaacg
      361 tcagcccggt tggcagggcg cctttcgtcg cagcgcctgg tatgaaaagc cgcggccgac
      421 ctttgccgat gcgctggcgc aggtgcgtcg cgcgctgtgg cggcagttag gtttttggct
      481 gtccgaggcc gcaatagaga aacaaaaacc tgcccaggtt ttattcgaac acttcgcgga
      541 actactcgct tacgtcgcct gaaaatggac aaactcgagc taagaactcc tgatacgccc
      601 tctgtaacgc tgggtagacg aggaaatagg atgagccgtt tttcgccaac ctctccagcc
      661 tggggccgag gcgggcccct cggagcgtgc tcggcgggga acccatcggg cggctcatcc
      721 taattcctcg gcttcaggat gtctgagccg gggctgccag gcccagcatc caacgagcaa
      781 agccgcgcgt cgaaaacgcc ccagagcaag aggcgaaggg tccatccctg aggagcgggg
      841 gaaccggccc tcaggtgcac gcctggtttc ctctcgctcg cccctcaggc cgcgtctttg
      901 gtcccggagc gtctgccccc gacgatctcg cctaactgcc gaaaccgctt ccagagcttg
      961 ggtaccagcc acaggcccag tagggcgagc gcgccaaaaa ccaac
//
LOCUS       DASRPQ010001705         1106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2107418, whole genome shotgun sequence.
ACCESSION   DASRPQ010001705 DASRPQ010000000
VERSION     DASRPQ010001705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2107418"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..622
                     /locus_tag="VFD73_19395"
     CDS             <1..622
                     /locus_tag="VFD73_19395"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF016824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004359 - glutaminase activity [Evidence
                     IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutaminase"
                     /protein_id="HZI76142.1"
                     /translation="DRTMNPLVNAGAMATTSLVPGTTAEEKFQSILAAMSRFAGRQLV
                     MDADVYESETATNDRNRGIAHLLDGYGRMYCDPNLATDVYTRQCSVRVSARDLAVMGA
                     TLANGGVNPVTGEQAIDTRHCKRVLAVLATAGLYEHSGQWLYDVGLPGKSGVAGGIVT
                     VSPGKGGLGTFSPPLDAAGNSVRGQHITKYLSEALGLNLFASAPAT"
     gene            complement(793..930)
                     /locus_tag="VFD73_19400"
     CDS             complement(793..930)
                     /locus_tag="VFD73_19400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76143.1"
                     /translation="MPGITFEERTAGTGQPSAYKPTGERTTSLEARPANGVARRRAVG
                     G"
BASE COUNT          204 a          400 c          328 g          174 t
ORIGIN      
        1 cgaccgcact atgaacccgc tggtcaacgc cggtgccatg gccaccacca gcctggtgcc
       61 tgggaccact gccgaggaga agttccagag catcctcgct gcgatgtcgc ggttcgctgg
      121 acggcagctg gtgatggatg cggatgtcta tgagtccgag acggcgacca acgaccgtaa
      181 ccggggcatc gcccacctcc tcgacggcta cggccgcatg tactgcgatc ccaacctggc
      241 caccgacgtc tacacccgcc aatgttcggt ccgggtgagc gcgcgcgacc ttgccgtgat
      301 gggagccacc ctggcaaacg gcggagtcaa tccggtaacc ggtgagcaag ccatcgacac
      361 tcgccactgc aaacgggtac tggccgtgct ggccacggcc gggctctacg agcattccgg
      421 ccagtggctg tacgacgtgg gcctgcccgg caaaagcggg gtcgccgggg gcatcgtgac
      481 cgtgtcgccg ggcaagggag gcctcggcac cttctccccg ccgcttgacg cggcaggcaa
      541 cagcgtgcgg ggacaacaca tcaccaaata cctctccgaa gcgctcgggc tcaacctctt
      601 cgcctccgct cccgctacct gaaaccaccc cgaaagaacc gggcccgttc cgcagtcaac
      661 gccacctggc cacggcaccc acacaccgtc cggtgccacc accgatggtc accctccaca
      721 caatcggtat cctgatcggc caacccgccc gcatgattat gcgcagcaca gttgcgccgg
      781 gaacgcccgg ttctagccgc cgaccgcgcg tcggcgggca actccattgg ctggccgggc
      841 ttccagcgaa gtggtgcgct caccggtcgg tttgtaggcg cttggctggc ccgtgccggc
      901 cgttcgctct tcaaaggtaa ttccaggcat ggcgcctccc aagatcttat gactctcgat
      961 cgaccaccga tcaggtccag tgtctgcagg cggcggggtt tctgccacac atgaccaccc
     1021 acgcaacagc ccacatgacc acccacgcaa agccctcatg aatccgccac cgtcggcctg
     1081 cgagtagtcg ccagggtgga gcgcgg
//
LOCUS       DASRPQ010001706         1996 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2387461, whole genome shotgun sequence.
ACCESSION   DASRPQ010001706 DASRPQ010000000
VERSION     DASRPQ010001706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2387461"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1052)
                     /locus_tag="VFD73_19405"
     CDS             complement(<1..1052)
                     /locus_tag="VFD73_19405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HZI76144.1"
                     /translation="MTKAAVRVAAGQGFWGDWLEAPVRQVRGGPIDYLMMDYLAEVTM
                     SIMQKQRSRDPRAGFARDFVPLMERILPDLVNRKIKVTSNAGGVNPSACAEAVLEVAR
                     RIGLAGKLTIGLVTGDDILDRIDELIASGHPLENMETGRPLSDVRNRVLSANAYLGMA
                     PIVEALRAGADIVITGRVTDTGLTLGPIFHEFDWPADDWDKVAAGTVAGHIIECGAQS
                     SGGNLLKDWQAVKGLEDPGFPIVEASPDGSFVVTKHPGTGGVVSIASVTEQLVYEMGD
                     PHSYITPDGVADFTTIHMEQSGPDRVRVTGIRGAPRTPLLKVSIAYFYGYKAVGTLVY
                     SWPDAYEKARAADRILR"
     gene            complement(1057..>1996)
                     /locus_tag="VFD73_19410"
     CDS             complement(1057..>1996)
                     /locus_tag="VFD73_19410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76145.1"
                     /translation="ELRSSARVDPGAQLRSFFFADSARPFEVRVSSAVGQKGLAFLHE
                     PDGMPYRDESARPIGAADREAVYQVDGRDAVKGAYEVVAVSPSTSPLSANVKVIQSPL
                     RLQLGRDQETVNAGLTNLTSSPVRTQVAVLLGGAERVETVIAKGSAPRRIPFVAPSWA
                     RAVVVDLTMDRAQWGQFTDFGFTLFDSLGRQIEKQPLNYAFGRLQAKLPDGHGDMRIE
                     LGLFPGFAEPKGDDNWNLRAWIRLYADSAVALSPKARPTPRSPWHLAKRRASGSGFPP
                     VHFSWGTGSFRWVSWLLALETKAGLGREDSRCPTLR"
BASE COUNT          375 a          645 c          625 g          351 t
ORIGIN      
        1 cgcaggatgc ggtccgccgc tcgagccttc tcgtaggcat ccggccagga gtaaaccagc
       61 gtgcccaccg ccttgtaccc gtagaaatac gcgatggaga ccttgagcag cggagtgcgc
      121 ggcgcgcccc ggattccagt cacgcgcacc cggtcggggc ccgactgctc catgtggatg
      181 gtggtgaagt cagcgacgcc atcaggcgtg atgtaactgt gggggtcacc catctcatag
      241 acgagctgct cggtgaccga agcgatcgag acaacgccgc cggtcccggg atgcttggtg
      301 accacgaaac ttccgtcggg cgatgcttcg acaatgggaa agcctggatc ctccagtcct
      361 ttgactgctt gccagtcttt caaaaggttt ccgcccgagc tctgcgctcc gcactcgatg
      421 atatggccag cgacagtccc cgccgccacc ttgtcccagt catctgccgg ccaatcgaac
      481 tcgtggaaga tcggtcccaa cgtgaggccg gtatcggtga cccgtccggt gatcacgata
      541 tcggcaccgg cgcgcagtgc ttcgacaatc ggggccatgc ccagataggc gttggccgag
      601 aggacccgat tccgcacatc ggaaagcggg cggccggtct ccatgttttc caggggatgg
      661 ccgctcgcga tgagctcgtc gatgcggtcg agaatgtcat cgccggtgac caggccgatg
      721 gtcagcttgc cggcaaggcc gatccgccgg gcaacctcga gcactgcctc ggcacatgca
      781 ctcgggttta ctccgccggc gttggaggtc accttgattt tgcggttcac gagatcgggg
      841 agaattcgct ccatgagcgg cacgaagtct ctggcaaatc ccgcgcgtgg gtcgcgcgat
      901 cgctgtttct gcatgatgga catggtgact tcggcaaggt agtccatcat cagatagtcg
      961 atcggacctc ctctcacctg ccgcacgggt gcctcgagcc agtcgcccca gaacccctgc
     1021 ccggcggcga cccgcacggc tgctttcgtc atcgcatcat cggagggttg gacagcggga
     1081 gtcctccctc ccgagtccag ctttggtctc cagtgcgagc aaccaggaca cccaacggaa
     1141 agaacccgtc ccccaactga aatggactgg tgggaagccc gaacccgacg ctcgccgttt
     1201 tgccaggtgc cacggtgacc gcggagtcgg ccgggctttt gggctcaggg caaccgcgga
     1261 atcggcatac agccggatcc atgctcggag attccagttg tcgtcgcctt tgggctcggc
     1321 gaacccgggg aagagaccca actcgattcg catgtctcca tggccgtcgg gcagcttggc
     1381 ctgaagccgc ccaaacgcgt aattgagtgg ctgcttctcg atctgtcggc cgagtgaatc
     1441 gaacagggta aagccgaagt cggtgaattg cccccactgg gctcgatcca tggtcaggtc
     1501 gacgaccact gctctggccc aggaaggggc aacgaacgga atccgtcgtg gcgccgagcc
     1561 tttcgcgata accgtttcga cccgttcggc gccgcccagc agcaccgcaa cctgggtgcg
     1621 aaccggagac gaggtcaggt tcgtgaggcc cgcgttcacg gtctcctgat cacgccccaa
     1681 ctgcagccgg agaggggact gaatcacttt cacattggcg ctcagaggcg aggtggaggg
     1741 cgaaaccgcc accacctcat acgcgccctt caccgcatcg cggccgtcca cctgatacac
     1801 cgcctcgcga tcggcggcgc cgatcggccg ggcactctca tcccggtagg gcatgccgtc
     1861 gggctcgtgc agaaaggcca aacccttttg cccgacggcg ctcgagaccc tcacctcgaa
     1921 cgggcgagcg gaatcggcga aaaagaaaga gcggagctgg gcgccgggat caaccctggc
     1981 cgaggagcgg agttca
//
LOCUS       DASRPQ010001707         1215 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2742754, whole genome shotgun sequence.
ACCESSION   DASRPQ010001707 DASRPQ010000000
VERSION     DASRPQ010001707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2742754"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1215)
                     /gene="glgX"
                     /locus_tag="VFD73_19415"
     CDS             complement(<1..>1215)
                     /gene="glgX"
                     /locus_tag="VFD73_19415"
                     /inference="COORDINATES: protein motif:HMM:TIGR02100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004133 - glycogen debranching enzyme
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HZI76146.1"
                     /translation="QIWHAYLPDVRPGQTYGYRVHGPHSPTQGHRFNPAKLLLDPYAK
                     AISGTVEWSDALSGYPVRSADPDRDLALDTQDSAAAMAKSIVIESAFTWGEDQPPRTP
                     WNRSLIYECHVKGMTMLHPEVPPPLRGTYLGLATDPIIDHLKSLGVTAVELLPVHHMV
                     TERRLAELGLTNYWGYSSIGFFAPDIRYATKSAERGAQVTEFKSMVKRLHAAGLEVIL
                     DVVYNHTAEGNHLGPTLAFRGINNSAYYRLNPDNPRFYTDFTGCGNTVDLRHARTMQL
                     VMDSLRYWISEMHVDGFRFDLAPVLGRGTSGMDPLGEFFDLVRQDPFVSQCKLIAEPW
                     DLGPDGYQAGRFPIGWAEWNGKYRDTSRRFWRGDPGQVGDLASRLAGSSDLYEPTGRS
                     PLASINFVTCHDG"
BASE COUNT          233 a          371 c          381 g          230 t
ORIGIN      
        1 ccgtcatggc aggtgacgaa attgatgctc gcgagcgggc tccggccagt gggctcgtac
       61 agatcactac tgccggcgag tcgggacgcg agatccccga cctgccccgg atcgcctcgc
      121 cagaagcggc gtgaggtatc ccggtacttt ccgttccact cagcccatcc gatgggaaac
      181 cgccccgcct ggtagccatc ggggccaaga tcccagggct cggcaatcag cttgcattgg
      241 gacacgaacg ggtcctgccg gaccagatcg aagaactcac caagtgggtc catgccggag
      301 gttccccggc ccagaaccgg agccagatcg aaccggaatc catccacgtg catttccgat
      361 atccagtagc gcaggctatc catgaccagc tgcatggtgc gggcgtgtcg cagatcgacc
      421 gtattgccac agccggtgaa gtcggtatag aagcgtggat tgtccgggtt caagcggtaa
      481 taggcggagt tattgatccc tcgaaaggcg agcgtcggcc cgagatggtt gccctccgcg
      541 gtgtggttgt agaccacatc gagaatcacc tcgagtcctg ccgcatggag ccgcttcacc
      601 atcgatttga attcggtaac ctgcgcaccc cgctcggccg acttcgttgc ataccggata
      661 tccggagcga aaaacccaat cgagctgtag ccccagtagt tggtgagacc cagctcagcg
      721 agacgccgct ccgttaccat gtgatgcacc ggcagcagct ccaccgcggt cacgccaagc
      781 gacttcaggt ggtcgataat cggatcggtt gcgagtccca ggtaagtccc cctgagtggc
      841 ggcggcacct cggggtgcag catggtcatg cctttgacat ggcactcgta aatcaggctt
      901 cgattccacg gcgtccgagg tggctgatcc tcgccccagg tgaacgctga ttcgatcaca
      961 atggacttcg ccatggcggc cgcgctgtcc tgggtatcca gtgccagatc gcggtcgggg
     1021 tcggcgctcc ggaccggata gcccgagagc gcgtcgctcc actcgaccgt accgctgatt
     1081 gccttggcgt atggatccag cagcagcttg gccgggttga agcgatgtcc ctgggtgggg
     1141 ctgtggggac catgcactcg atagccgtat gtctgaccag gacggacgtc gggtagatag
     1201 gcgtgccaga tctgg
//
LOCUS       DASRPQ010001708         1000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3963495, whole genome shotgun sequence.
ACCESSION   DASRPQ010001708 DASRPQ010000000
VERSION     DASRPQ010001708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3963495"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1000)
                     /locus_tag="VFD73_19420"
     CDS             complement(<1..>1000)
                     /locus_tag="VFD73_19420"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI76147.1"
                     /translation="SCAYLWEICEALGTQHWRRRPAPEVPAAADSDLPMISLHVPAHN
                     EPPGMVIDTLRSLVRLDYPRYEVILIDDNTDDAALWQPVQQWCARHGVKSVHLEKWPG
                     YKSGALNYALRHLTDPQAELIGVVDSDYQIEPGFLRACVRAFADPWIGFVQAPQDYRG
                     WRQAAYYRRLYYSYKYFFAISQPSRNEHDGAIFAGTMGLIRRVALDELGGWDQWCITE
                     DAELSLRLLRAGWSGLHLDQSWGHGIMPLTFEALKGQRYRWCFGGIQILRSHWRSLLP
                     GRTSKHNHLTAAQRWAYLSGAIQWYGDLLGLFFFVFLLAGSADLTTGDGQVFRKLTP"
BASE COUNT          192 a          315 c          332 g          161 t
ORIGIN      
        1 ggggtgagct tacggaatac ctgaccgtca ccggtggtca ggtcggccga cccggcaagc
       61 aggaaaacga agaagaacag ccccagcagg tcgccgtacc actggatcgc gccagagaga
      121 taggcccacc gttgcgcggc cgtcaggtgg ttatgtttcg acgtgcgacc agggagcagg
      181 gaccgccagt ggctgcgcag gatctggatt ccgccgaagc accaccggta tcgctggccc
      241 ttgagtgctt cgaaggtcag cggcatgatg ccgtggcccc aggactgatc caggtgcagg
      301 cccgaccagc cagcccgcag cagccgcaat gacagctccg cgtcctcggt gatgcaccac
      361 tgatcccagc cgccgagctc gtccagcgct acccgccgga tcagccccat ggtgccagcg
      421 aagatagcgc cgtcgtgctc attgcgtgac ggctgagata tggcaaagaa gtacttgtag
      481 gagtaataca gacggcggta gtaggcggct tgccgccagc cacggtaatc ctgcggtgcc
      541 tggacgaagc cgatccaggg gtcagcgaat gcccgcacgc aggcccgcag gaaaccaggc
      601 tcgatctgat agtcggagtc caccacgccg atcagctccg cctgcggatc ggtcaggtgg
      661 cgcagcgcgt aattcagcgc tccggatttg taacccggcc acttttccag gtggacggac
      721 ttgaccccgt gcctggcgca ccactgctgg accggctgcc acagggccgc gtcgtcggtg
      781 ttgtcatcga tcaggatgac ctcataccgg gggtaatcga ggcgtaccag ggaacgcagc
      841 gtgtcgatga ccatgcccgg cggctcgttg tgggcgggga cgtgcaggct gatcatcggc
      901 aggtcgctgt ccgcggcggc cggaacctca ggggctggcc gcctgcgcca gtgctgcgta
      961 ccgagcgctt cgcagatctc ccataggtag gcacaagaca
//
LOCUS       DASRPQ010001709         1699 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2387697, whole genome shotgun sequence.
ACCESSION   DASRPQ010001709 DASRPQ010000000
VERSION     DASRPQ010001709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2387697"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1699
                     /locus_tag="VFD73_19425"
     rRNA            <1..>1699
                     /locus_tag="VFD73_19425"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          377 a          423 c          629 g          270 t
ORIGIN      
        1 ggcgctgggg ttgtagggca tgttcagacg tcgcaaggcg tcactgtgtg ggggttgtgc
       61 gtacgcgaag ggtctgggaa ggcccaccgg agcgggtgag agtcccgtag cggacaccgg
      121 cgacagggtt ggtggatggt attcctgagt accacggggc acgagaaacc ctgtgggaag
      181 ctggggggac caccctccaa ggcgcgacta ctcctggcca ccgatagtga accagtaccg
      241 tgagggaaag gtgaaaagca ccccgggagg gggatgaaag agcctctgaa ccgctgcact
      301 gacaagcagt cggagggaga cggttgctca cgttcgcgtg agaacctgcc tgacggcgtg
      361 ccttttgtag aatgatccgg cgagtgtatg ttggcagcgt cctccggcgt ttggtcggct
      421 ggaggagtag gttaagcggc acagaaagta aaagccgtgg agccggagcg aaagcgagtc
      481 tgaagcgggc taattaggta gcgttgccag gatacgaccc gaaaccaggt gagctaccca
      541 tgggcagggt gaagcggggg taagacctcg tcgaggcccg aacccaccag tgttgcaaaa
      601 ctgggggatg acctgtgggt agaggtgaaa tgccaatcga acctggagat agctggttct
      661 ccccgaaatg catggaggtg cagccgtgac gttttggcct gcctgggagg taaggcactg
      721 gatgggtgcg gggccgtgtg cggttaccaa gctcaaccaa acccagaatg cccaggtgag
      781 gagcaggagc gagtgaggcg gcgggggcta acctccgtac gccaagaggg aaacaaccca
      841 gaccgtcggc taagggccct aaagggctgc tgagtgggaa aggtagtggg ggtgcgcaga
      901 cagccaggag gttggcttag aagcagccat ccttgaaaga gtgcgtaata gctcactggt
      961 cgagtgcccc tgcgccgaca atgtaacggg gctcaagcag cctcccgaag ccacggatgt
     1021 cgcggctgtc gttttgcggc agcgccagag acatggtagg ggagcgttgt gggcagcggt
     1081 gaaggcggac cggaagggcc ggatggagcg cccacaagtg agaatgccgg aatgagtagc
     1141 gtgaatggcg gtgacgaacc cgccacaccg gaagcctgag ggttcctggg caacggcagt
     1201 cgtcccaggg tgagtcggat cctaagccga ggcctctgat tgtcaggggg cgtaggcgat
     1261 ggcgagcagg taagagagtc ctgcactcgt gcgcgcatga ataagcgagg gggggacgcg
     1321 acaggaagca cccccgcccc gaatggacag ggggcggtgt tagtccgggg gacgagaccc
     1381 aggcaaatcc gggtctcaca tgtatgttcg ctggactgac tggaggggcc gatgaggccc
     1441 tggtagtggt gtggtctcca ggtcgcccag aaaagcctct agcagctagg cctcgcaagg
     1501 ggcgtaggca ggccgcacga tccgtaccgc acaccgacac aggtgggcag gggtaaggac
     1561 cccaaggtgg acgagcgatc ctccgttaag gaactcggca aattaacccc gtaacttcgg
     1621 gagaaggggt gccccggcag tgtaggaacg atgcttgcat cgcttgcatc gctccgcgca
     1681 tgagggggcc gcaggaagc
//
LOCUS       DASRPQ010001710         1706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1133958, whole genome shotgun sequence.
ACCESSION   DASRPQ010001710 DASRPQ010000000
VERSION     DASRPQ010001710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1133958"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /locus_tag="VFD73_19430"
     CDS             complement(<1..228)
                     /locus_tag="VFD73_19430"
                     /inference="COORDINATES: protein motif:HMM:NF014584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CrcB family protein"
                     /protein_id="HZI76148.1"
                     /translation="MIGAGGAIGAAARYGTLLALPPHLDAFPVATLLVNVVGAVILGA
                     VAALPADWLSAHELTRPAIGTGFCGGLTTFST"
     gene            complement(306..647)
                     /locus_tag="VFD73_19435"
     CDS             complement(306..647)
                     /locus_tag="VFD73_19435"
                     /inference="COORDINATES: protein motif:HMM:NF022684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3040 domain-containing protein"
                     /protein_id="HZI76149.1"
                     /translation="MKIEVLEVVAMGLHAAERLKLRRIEEGLQADDPGLDALLAGGLP
                     RRGAALRPPAAGVLAGYLAPPALVLAGLVLHVTWLVVAGVAVCPFAPVIAWLVIRRHF
                     VRGRTRHSRQP"
     gene            707..859
                     /locus_tag="VFD73_19440"
     CDS             707..859
                     /locus_tag="VFD73_19440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76150.1"
                     /translation="MKGKKVSKNEINETLAGGIDLSRDWREAVGLSIIDSERIFDDGG
                     DEAAAR"
     gene            1337..>1706
                     /locus_tag="VFD73_19445"
     CDS             1337..>1706
                     /locus_tag="VFD73_19445"
                     /inference="COORDINATES: protein motif:HMM:NF014360.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AmiS/UreI family transporter"
                     /protein_id="HZI76151.1"
                     /translation="MASVGLLYVGAVLFINGVMLLGWLDAKSAAPMNFFVGGLQVLTP
                     TFIIFTANGDQNTILAASGLYLFGFTYLYVGINLTAGLDGTGLGYFSLFVAVCAVVFS
                     YLNFSSRLNDHAFGVIWLYWA"
BASE COUNT          309 a          539 c          556 g          302 t
ORIGIN      
        1 cgtcgagaag gtggtgagcc ccccgcaaaa gcccgtgccg atggccggcc gggtcagttc
       61 gtgggcggac agccagtcag ccggcagagc ggcgactgca cctagaatca ccgcccccac
      121 cacgttgacc agaagggtgg cgacggggaa ggcatccaag tgtggcggca aggcgagcag
      181 ggtcccgtag cgggccgctg ccccgattgc gccaccggct cctatcaccg ccagcagggt
      241 cgtgcggcgt cggagcgcac ttggcggtgc cgagtgcctc gcgcggccgt cggtggggcc
      301 actcgtcatg gttggcggct atgtctggtc cgcccgcgga cgaaatgacg acggataacc
      361 agccaggcga ttaccggtgc gaacgggcag accgcgaccc cggccacgac cagccaggtg
      421 acgtgcagga ccagcccggc aaggacaagg gcgggaggcg caaggtaacc ggccagcacc
      481 ccagctgccg gtggacggag ggcagccccg cggcgtggca gcccgcccgc cagaagagcg
      541 tcgaggccag ggtcgtctgc ttgcagacct tcctcgatcc ggcggagctt caaccgctcc
      601 gcggcatgca gccccatggc cacaacctcc agaacctcta ttttcacagc cccggccgat
      661 cgcggctggt gggcctgaag gcagtcttcc ctctagtcca ccgatcgtga agggcaagaa
      721 agtgtctaag aatgagatca atgaaactct cgccggaggt attgacctct ccagggactg
      781 gagggaagct gtcggtctga gcatcatcga tagtgaacga atctttgatg atggtggcga
      841 cgaggccgcg gcgaggtgat gcatggcgac cttcctttac cgctgtacta ccgacgggat
      901 cctggagatg cgctggccgg ttggtaccgc ccctagccag gtcaggtgcc cgacatgcgc
      961 ggaggatgcc cgccgggtct ataccgcccc gctggtgtca ggcgggtcga gcccggccat
     1021 ggcgctgatc gatcggacgc agcgtacgcg ggacgagccc gaggtggtga ccagcttgcc
     1081 gtcgcacggc cgtgcacaga gacggcctga cctgaatcct gcctggcagc gcctcccacg
     1141 gccctgagct gggctgagat ggccgcggcg acaccttcac gtgatagttc agtttcccgc
     1201 ggcggagggg aaccgttccc agttatcgaa taagacttcg aatgacaggg tgagcggtgc
     1261 gatttgctac ggcatacgcc agtatgcgcg cctgttcccc gccctgcctg cgaggcggac
     1321 tataaggagg cgtgttatgg caagtgtcgg cctgctatac gtaggcgctg tgctattcat
     1381 caatggggta atgctgctcg gatggctcga tgcgaaatcc gcggccccga tgaacttctt
     1441 cgtgggcggt ctccaggtac tgacgccgac cttcatcatc ttcacggcca acggagatca
     1501 gaatactatc ctcgccgcat cgggcctgta cctgttcggc ttcacttacc tctacgtggg
     1561 aatcaacctc acggccggac tggatggcac cggactcggc tacttctccc tattcgtggc
     1621 cgtatgcgcg gtcgtattct cttacctcaa cttcagcagc cggctcaacg accatgcctt
     1681 cggtgtcatc tggctgtact gggcct
//
LOCUS       DASRPQ010001711         1151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2108068, whole genome shotgun sequence.
ACCESSION   DASRPQ010001711 DASRPQ010000000
VERSION     DASRPQ010001711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2108068"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(252..758)
                     /locus_tag="VFD73_19450"
     CDS             complement(252..758)
                     /locus_tag="VFD73_19450"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HZI76152.1"
                     /translation="MSIIADLQRRSAHIHWPEGIVPEHADLFAHNDIVIAAPAGKIWE
                     HLLRPTAWPDWYSNASDVTVNAPSGLLGAGVTFDWITFGAHIHSTVHEFEPTARIGWY
                     GETDQWLAYHTWLLEPRDEGTTYVVMEETGTGLNPKKLAGSNPGHMHRGHDLWNISLK
                     FLCESTQD"
     gene            927..>1151
                     /locus_tag="VFD73_19455"
     CDS             927..>1151
                     /locus_tag="VFD73_19455"
                     /inference="COORDINATES: protein motif:HMM:NF012354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HZI76153.1"
                     /translation="MELRQLEYFAAVAGEKSFTRAARRLHVVQSAVSAGITALERDLG
                     VLLLERTAQRVRLTEAGAAFLPEAHAVLDSA"
BASE COUNT          185 a          347 c          395 g          224 t
ORIGIN      
        1 gctctgcctc acctgcggca ccaagatgcg cccggccgga agctgctacg tctgcgaagg
       61 ctgcggctcc accagcggct gcagctaacc gggcattgcc ctgacggtga atagcctgct
      121 caggcggggt ctccgttggt gagcggggtc gtgcctacca tccttgatca tcgcaacggt
      181 tgcatcaaat gcaacttggc gggcgtctcg gaaagcctag tagcggagac gcccagcatt
      241 tcgccggtgt gctagtcctg ggtgctttcg cagaggaact tgaggctgat gttccacagg
      301 tcgtgaccgc ggtgcatgtg gccgggattg gagccggcga gtttcttcgg gttgaggccg
      361 gtgcctgtct cttccatgac cacgtaggtg gttccctcgt cgcgcggctc gagcagccag
      421 gtgtggtatg ccagccactg gtctgtctcg ccgtaccagc cgatgcgggc tgtgggctcg
      481 aattcgtgga cggtgctgtg gatgtgcgcg ccgaacgtga tccagtcgaa ggtaacgccg
      541 gcgccgagga gcccgctggg agcgttgacc gtgacgtcgc tggcgttgga gtaccagtcc
      601 ggccaggcgg tggggcggag gagatgctcc cagatctttc ccgcgggcgc cgcgatcaca
      661 atgtcgttgt gggcgaacag gtcggcgtgc tcgggcacga tgccctccgg ccagtggatg
      721 tgcgccgagc ggcgctgcag gtccgcaatg atcgacatga ctatgccctc cgtcagggtt
      781 cttcatggtc gccgggacag atgggtgcag gcccgatttg ttcctcttca tcgtgaaggg
      841 gcacgtctat caaggcaaac gaatgattcc gataccatag tcaatagagt tgataatgac
      901 tggtcagcgg gccggggagg ccgcttgtgg aactgaggca gctggaatac ttcgccgccg
      961 tcgccggcga gaagagcttc accagggccg cgcggcgcct gcacgtcgtg caaagcgccg
     1021 tgtccgcagg aatcaccgcc ctcgagcgcg atctcggcgt cctgctgctc gagcgcaccg
     1081 cacagcgtgt ccggctcacg gaggcaggcg cggctttcct ccccgaagcg cacgctgtcc
     1141 tggactccgc c
//
LOCUS       DASRPQ010001712         1715 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3672966, whole genome shotgun sequence.
ACCESSION   DASRPQ010001712 DASRPQ010000000
VERSION     DASRPQ010001712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3672966"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            531..>1715
                     /locus_tag="VFD73_19460"
     CDS             531..>1715
                     /locus_tag="VFD73_19460"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI76154.1"
                     /translation="MLFLVGCTGPRSNVVDRVPSLRVADAALVAGAPEVALRVADLTL
                     QRDPRNAEALVTKGDTLYAMGLREEARTAYRQAVNLDPTLAAAQLGLGRTLVQSDPTA
                     AETAFLAAVASRPGDSAALNNVGIARDLLGRHAEAQEAYRRALAIAPGAADVKVNLGL
                     SLALTGNKSAAVEILHEAAAAPETIRGRGKELAAALALAGDAVGAHQLATAGSPQAAM
                     PSIASAEIPRPPIVAGREEAVAAKPKQDKLVAARLLTPSERDDPDVLSGITKAPVAAV
                     GRANLGPLPSDTPEALVGMAQLQVPKARKGPVTADAPQPNSKLALPAPETGAFVQLAS
                     LHSLDDARYEWQRLTRRFSDLLSGHTPVIVQADALGQTYWCLRTFGFTDLDGATAMCS
                     AAH"
BASE COUNT          319 a          514 c          575 g          307 t
ORIGIN      
        1 tcctcccccc aggagatcgc atttagcaag gcggcccacc agctcttgga tgaagacaga
       61 cagaagcgag aaacgcgtcg ctgatcgcgt tcgaactacc ggcccatcgt agcctacaag
      121 catcgctggg gagacggcgc aattgacgcc gtggtcatca ttgggctgcc aaggtggcgt
      181 gaccggggcc cggagcggcc gcatcccgtt gacgagcccg gcgcggtgct ctgcttcacc
      241 cagaggtagc ggcttcccgt acagggacag gctagccagc aacttttggt tgcagaatcg
      301 ggccatcgta gttagagcgt cgactttgct gactgaacgt cgattcgttg aagcttttgg
      361 ccggggaaac agtcacggaa ctggagttga aacctccctg cagacaggaa gtggaaatgg
      421 gactgagggc gtcgacgacg gatgcgccat tcgggcgact ggagcgtcgg acggccacac
      481 ggagcggggg ccttattttg agcgggtcag ggccagccac gattgcagca atgctgttcc
      541 tcgtcggctg cactggccca aggtcaaacg tcgtggaccg ggtgccgtca ttgcgggtgg
      601 cggatgctgc cctcgtggca ggcgctcccg aggttgccct gcgggttgcc gatctgacgc
      661 tccagcgcga tccacgcaat gcagaggctc tagttaccaa gggcgatacg ctttacgcga
      721 tgggcctgcg ggaggaggcg cgcaccgcat accgtcaggc ggtgaacctt gacccgacac
      781 tggcggcggc gcagttgggc cttgggcgga ctctagtgca gtcggacccg acagccgccg
      841 agaccgcctt tctggcggcc gttgcgtcgc ggcctggtga cagcgcggcg ctcaataatg
      901 ttggcatcgc aagggatctg ctgggacgtc acgcagaagc gcaagaggcc tatcgaaggg
      961 cgctcgcgat tgctccgggg gcggccgacg taaaagtaaa cctgggtctc tcgctcgctc
     1021 taaccggaaa caagagcgcg gcggtcgaga tactgcatga ggccgctgcg gcgccggaga
     1081 ctattcgggg ccgcgggaag gaactggcgg ccgcactggc tttagccgga gatgcggttg
     1141 gtgcacatca actcgcgacc gccggatccc cgcaagcagc gatgcctagc atcgcctcgg
     1201 ccgaaatacc acgacccccg atcgtggcgg ggcgggagga agcggtcgct gctaagccga
     1261 agcaagataa gcttgttgct gctcgtctac ttacaccttc agagcgggat gacccggacg
     1321 tgctgtcggg tatcaccaag gcccctgttg ctgccgtcgg tcgtgcgaac ctggggcccc
     1381 ttcctagtga cacacctgag gccctggtcg ggatggcgca gcttcaggtg cctaaggccc
     1441 gtaagggtcc agtgactgcc gacgctccgc agccgaactc aaagcttgca ttgccggcac
     1501 ccgaaaccgg agcctttgtc cagctcgcat cgctgcactc actggatgac gcccgctacg
     1561 aatggcagcg cctgacgagg cggttctccg atctcctcag cgggcatact ccggtgatcg
     1621 tgcaggcaga tgcgctcgga cagacatact ggtgtctgcg cacctttgga tttactgatc
     1681 tggatggggc gacggcgatg tgttcggcgg cgcac
//
LOCUS       DASRPQ010001713         1699 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4267808, whole genome shotgun sequence.
ACCESSION   DASRPQ010001713 DASRPQ010000000
VERSION     DASRPQ010001713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4267808"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            369..1645
                     /locus_tag="VFD73_19465"
     CDS             join(369..648,648..1645)
                     /locus_tag="VFD73_19465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611776.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZI76155.1"
                     /translation="MPNRYDASTKAKAIRLVREHRADYPTQWAAITAAAGRLGMSAET
                     LRLWIRQEEVDSGRTAGVTTEESKEIRDLKRKVRELEETIEILKAAASFFRAGVRPAV
                     PLICRFIDEHKERFGVAPVCRALTVHGIQIAPRTYWARLASGPSRRELWDMTVTEILA
                     GIYEPDDNSRRPPESMYGTVKMRGYLQRQGIEVAKCTVERLKREHGWRGTARARRPPR
                     TTVADPDAQRAPDLVKRNFKASRPGELVVADFTYVPMDTSRFGYTAFVIDAFAGLIPG
                     WECSLSKKTAFVEAAIRQAATYRARQGRPFTGKEIHHSDAGSQYTSIHFTETLMLAGL
                     RPSIGTVGDAFDNALAETTIGLYKTECIREGSPFRTGPLMTLAGLEDITSAWVHWYNT
                     SRLMHRLGLRPPAEAEAEYHQHHVEPHPGQTHK"
     misc_feature    638..769
                     /locus_tag="VFD73_19465"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01497"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="AL1L pseudoknot; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01497"
BASE COUNT          343 a          527 c          556 g          273 t
ORIGIN      
        1 caagacttgg gcgtaacgct cctggacaac tgccgctacc ttgccgaggg ccaggaagtc
       61 cgggggcgct gctagcgcgg tcaatccgcc ttttgtcatt tgctcgaccg ccggccagct
      121 aggcatcgtc agccatgggc acggggcgag gtagattccc gccagccgta cagagcagct
      181 aggtcgcatg gccgcacgcc cccagagcgg agctaaatcg tattccgctg tgtacccgtt
      241 cttgacacag ctgcctggcc gcggacgggt tgtcacaaat tcggtataac tcaagacgag
      301 caccctgtcg agattgaact gacccgggtt tcgtgcacac ctccttcttt gagcaggagg
      361 atggcacgat gccgaacagg tacgacgcga gcacgaaggc caaggcgatc cggttggtcc
      421 gcgagcaccg cgcggactac ccgacgcagt gggcggcgat caccgcggcg gcaggccgtc
      481 tggggatgag cgcagagacg ctgcggttgt ggatccgcca ggaagaagtc gattccggca
      541 ggacagcggg tgtcacgacg gaagagtcga aggaaatccg cgaccttaag cggaaggtgc
      601 gggagctcga ggagaccata gaaatcctca aggcagcggc aagttttttc gcgcgggagt
      661 gcgacccgcg gttccgctga tctgccggtt catcgatgag cataaagaac ggttcggggt
      721 cgcaccggtc tgccgtgccc ttacggtgca cggtattcag attgccccga gaacgtactg
      781 ggcgcggctg gcttcggggc cgagcaggcg cgagctgtgg gatatgaccg taacagagat
      841 cctggccggg atctacgagc ccgatgacaa cagccgccgc cctccggaat cgatgtacgg
      901 gacagtgaag atgcgggggt acctgcagcg gcagggcatc gaggtggcca agtgcaccgt
      961 cgagcggctc aaacgtgagc acggctggcg cggtaccgcc agggcgcggc ggccgccgcg
     1021 caccacggtg gccgatcctg acgcgcagcg ggcgccggac ctggtcaagc ggaacttcaa
     1081 ggcctcgcgg cccggtgagc tggtggtggc ggacttcacc tacgtgccga tggataccag
     1141 ccggttcggc tacaccgcgt tcgtgattga cgcattcgca gggctgattc ccggatggga
     1201 atgctcgctt tcgaagaaga ccgcgttcgt ggaggcagcg atccgccagg cagctaccta
     1261 ccgggcgcgg cagggccgcc cgttcaccgg aaaggagatt catcactctg atgcgggaag
     1321 ccagtatacg agcattcatt tcaccgagac cctgatgctc gccgggctgc ggccttctat
     1381 cggaaccgta ggcgacgcat tcgataacgc cctcgcggaa acgacaatcg gcctgtacaa
     1441 gaccgaatgc atccgggaag gctcaccgtt caggacaggt ccgcttatga ccctggccgg
     1501 cctggaggac atcacctccg catgggtcca ctggtacaac accagcaggc tcatgcaccg
     1561 cctcggcctc cggccccccg ccgaagccga ggccgagtac catcagcacc acgtcgagcc
     1621 ccacccgggc cagacacaca agtaacgagg agtgcatcaa acccgggtcg gttcacagaa
     1681 gccgcaccgt cacatcttg
//
LOCUS       DASRPQ010001714         1538 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3016276, whole genome shotgun sequence.
ACCESSION   DASRPQ010001714 DASRPQ010000000
VERSION     DASRPQ010001714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3016276"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..582
                     /locus_tag="VFD73_19470"
     CDS             <1..582
                     /locus_tag="VFD73_19470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HZI76156.1"
                     /translation="DSDSIGVKWTVHDDNDDQMVYSVYYRGDGETRWLLLKDDLTDKY
                     YSFDASLLPDGGYTVEVMASDAPSHSPSQALTSTRESARFEVDTTPPRIEGLKAAVEG
                     TQIHVSFHAVDGFSNIKRAEYSVDAADWQYVEPVGQLADSKSANYDFQVAVPAGGNPA
                     LPDPAKISSEHVVVVRVYDRFDNMSSAKTVIRK"
     gene            complement(737..>1538)
                     /locus_tag="VFD73_19475"
     CDS             complement(737..>1538)
                     /locus_tag="VFD73_19475"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI76157.1"
                     /translation="NAVAWNASIFQAATILGPSIGGFLYALSRGPTVVYATAVVTGLA
                     AVFSTLRITLQTQARAREPVTWNTVLAGFHYIWNHKLVLGSISLDMFAVLLGGAVALL
                     PVYASEILRTGPWGLGLLRSAPGVGAIAMAILVAHRPLRRRAGLTMLFCVTGFGVCTI
                     IFGLSRSLTLSLVALLLLGASDMVSVIIRSILVQLATPDEMRGRVNAVDMIFIGVSNE
                     LGQFESGLTAQWFGTVPAVVLGGVGTLVVIAIWAWAFPELRNADQITA"
BASE COUNT          321 a          472 c          490 g          255 t
ORIGIN      
        1 gattcggatt cgatcggcgt gaagtggacc gtccatgacg acaacgacga ccagatggtt
       61 tactccgtct attaccgggg cgacggagaa acccgctggc tcctgctgaa agatgacctg
      121 accgacaaat attattcgtt cgacgcgtcg ctcctgccgg atggcggcta caccgtcgag
      181 gtcatggcct cggatgcgcc ctcgcattct cctagccagg cgctgacttc aacccgggag
      241 agcgcgcgct tcgaagtcga taccacgccg ccccgaattg aggggctcaa agcagctgtg
      301 gaaggcacgc aaatccacgt gagcttccac gccgtcgatg gattttccaa catcaagcgc
      361 gccgagtatt cggtggatgc tgccgactgg caatacgtgg aaccagtggg ccagttggcg
      421 gactcaaaat cggcgaatta tgacttccag gttgcggtgc ctgcgggcgg gaatccagcg
      481 ttaccggacc cggcgaaaat atcttccgag catgtggtgg tggttcgggt ctatgaccgc
      541 ttcgacaaca tgagttcggc aaagacggtg atccgcaagt agtggttggt agcgccgtcc
      601 cggcggctgt ggtaggggcg tcccgcccgc accgcagagg gcgagacgcc ctcgggacag
      661 acggcaggat gccggcgcta cccagagtca ggatcagcgg agcttcgctc cgccggacag
      721 atgaggacat gtgtccctac gcggtgatct ggtcggcgtt gcgcagttcc gggaaggccc
      781 acgcccagat tgcgattacc accagggttc ctactccacc cagaaccacc gccggcaccg
      841 tcccaaacca ttgcgccgtc aagccggact cgaactggcc cagctcgttt gagactccga
      901 taaagatcat gtccacggca ttgacccgtc cgcgcatttc atccggagtg gccagctgga
      961 ccaggatgga gcggatgatc acgctgacca tgtcggaggc gccgagcaac agcagagcta
     1021 cgagcgacag ggtcaggctg cgcgaaagcc cgaaaatgat agtgcacacg ccaaatccgg
     1081 tcacgcagaa caacatggtg agtccggcgc ggcgccgcag cgggcggtgc gccaccagaa
     1141 tcgccatcgc gatcgcgccc acgcccggag cgctgcggag caggcccagt ccccaggggc
     1201 cggtcctgag aatttcgctg gcatagaccg gcagcagcgc cactgcgcct cccagcagga
     1261 cggcaaacat gtccagcgag atcgagccca gcaccagttt atggttccag atgtagtgaa
     1321 accccgccag cacagtgttc caggtgacgg gttcgcgcgc ccgggcctgg gtctgcaagg
     1381 tgatccggag agtggaaaaa acggcggcca ggcccgtgac taccgcagtg gcgtacacca
     1441 ccgtgggccc gcgtgagagc gcgtacagaa agccgccgat tgatggtccg aggatggttg
     1501 ccgcctgaaa gatgctggcg ttccaggcca cggcgttg
//
LOCUS       DASRPQ010001715         1032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4595242, whole genome shotgun sequence.
ACCESSION   DASRPQ010001715 DASRPQ010000000
VERSION     DASRPQ010001715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4595242"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(24..97)
                     /locus_tag="VFD73_19480"
     tRNA            complement(24..97)
                     /locus_tag="VFD73_19480"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(61..63),aa:Arg,seq:tct)
     gene            575..1027
                     /locus_tag="VFD73_19485"
     CDS             575..1027
                     /locus_tag="VFD73_19485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76158.1"
                     /translation="MKRISPTVYLVRATLSEYFELFMTTVGVLMAILITVSELSRGEQ
                     GLALTFLIWLQGLILWAVHRHCMLRSRALVQKMRLMMQDRVNNRLTIWLNLGDVQARV
                     AAEASREEREAVSVAAARAVSLELEKLSFESLRTWERRHARFLSSRML"
BASE COUNT          211 a          297 c          324 g          200 t
ORIGIN      
        1 tgggagagta ctcgtacgat gcatgcgccc ggcaggattc gaacctgcga cccacagctt
       61 agaaggctgt tgctctatcc agctgagcta cgggcgccag accggagacg ataacttagc
      121 gagccagggt ttcaggcgag acgacggtgc cagcctcagc ttcttcgctg ccgcacgaga
      181 aagtaggcga taccgaggac gatgaatagg ccaaccagga cggtggtact catagcgaat
      241 cccccttggt gtgggtcagc ggctatgggt cggcacttcc gcggctacgt gtccaacatt
      301 tggagatctc gccagtctgt acaagatttg tcgcagtaca cgtctgaaga agttaacgcg
      361 tactcagcgt ttcccccagc gattcaagaa ccccccgcct tgatactagc gggcgcagag
      421 agtgggttgg cctggcaagc tggacgactg cccgtcgaga gcaacgcggc tcagggagca
      481 ggggtctggc ttttattgac aaattattag atactgacaa gacccccgat caacacagcc
      541 ggacagcaga aggcgtcccg atcctgagga tccaatgaaa cgcatctccc ccaccgtgta
      601 cctggttcgg gccactctga gcgagtactt cgagctgttc atgacgaccg tgggcgtgtt
      661 gatggccatc ctgatcaccg tcagcgaact gagccgcggc gagcagggac tggcgctcac
      721 cttcctgatc tggcttcagg gtctgatcct ctgggcggtc caccgccact gcatgcttcg
      781 aagccgcgcc ctggtgcaga agatgcgctt aatgatgcag gaccgggtga acaaccgact
      841 gaccatctgg ctgaatctgg gggatgtgca ggccagggtg gcggcggagg ccagtcgcga
      901 agagcgcgag gcggtgtcgg ttgccgctgc ccgggcggta tcgctggagc tggagaagct
      961 ctcgttcgag tcgcttcgca cctgggagcg gcggcacgca cgctttctct cctcacgaat
     1021 gctctgatcg ga
//
LOCUS       DASRPQ010001716         1207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2108470, whole genome shotgun sequence.
ACCESSION   DASRPQ010001716 DASRPQ010000000
VERSION     DASRPQ010001716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2108470"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            164..>1207
                     /locus_tag="VFD73_19490"
     CDS             164..>1207
                     /locus_tag="VFD73_19490"
                     /inference="COORDINATES: protein motif:HMM:NF012239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HZI76159.1"
                     /translation="MEASLTATSSPLAAPREPAAATDAQQRMNIVIVGHVDHGKSTVI
                     GRLLADTHSLPEGKLEQVRAQCELNSRPFEFAFLLDALKDEQAQGITIDAARVFFKSR
                     RRQYLILDAPGHIEFLKNMITGASRAEAALLVIDAAEGVQENSRRHGYMVSLLGIRQL
                     SVVVNKMDLVGWDRGVFDRIVKEYGSFLDQIGIRPASFIPVSARGGDNIAERSEHLSW
                     YDGPTVLDALDAFETEAAPVHQPFRMPVQDVYKFTKQGDDRRIVAGTIQSGSVSVGDS
                     VIFYPSGKKSRVKSIEAFNRPPQTRADAGSAIGFTLQEQIYITRGEVATLELQPRPAV
                     TTRLRVSLFWLGKE"
BASE COUNT          228 a          375 c          368 g          236 t
ORIGIN      
        1 acgatccggg cggcgaagtc tcgcagtacg gggactacta ctacccctac gactacgcgg
       61 tcgaggagca atgaacctca ggcccgcgct ccccttcgtc gaacatcggc gatcctgagc
      121 ctcacgagcg gcgcctaagg cgccgctctc cgcctgatct gttatggagg caagtctgac
      181 cgccacttct tctcccctcg cggctccgcg ggagcctgcg gctgcgaccg acgcgcagca
      241 gcggatgaat atcgtgattg tcggccatgt ggatcacgga aagagtaccg tcatcggccg
      301 gttgctggcc gacacccatt cgcttcctga ggggaagctg gagcaggttc gagcccagtg
      361 tgagctgaac tccaggccct tcgagtttgc cttcctcctc gatgccttga aggacgagca
      421 ggcgcagggg atcaccatcg acgctgctcg ggtcttcttc aagagtcgcc gacgccagta
      481 cctgattctc gacgctcctg gtcacatcga atttctcaag aacatgatca ccggggccag
      541 ccgggccgag gctgcgctgc tggtcatcga tgcggcggag ggcgtccagg aaaactcccg
      601 ccggcacggc tacatggtct cgctgctggg aattcgccag ttgtccgtag tggtcaacaa
      661 aatggatctg gtcggctggg accgcggcgt gtttgaccgc atcgtcaaag agtacggcag
      721 ctttctggat cagatcggca tccgcccggc ttcgttcatt ccagtctccg cccggggcgg
      781 cgataacatc gctgaacgct ccgagcacct gtcctggtat gacggcccca ctgtgctgga
      841 tgcgttagac gcctttgaga cggaggcggc gccggtgcat cagccgttcc gcatgccagt
      901 ccaggacgtc tacaaattca ccaagcaggg cgacgaccga cgcatagtcg cgggcaccat
      961 ccagtccgga tcggtcagcg ttggcgattc ggtgatcttt tatccgtccg gaaaaaagag
     1021 ccgagtcaag tccatagagg cttttaatcg gccaccgcaa acccgggccg atgccggatc
     1081 ggcgatcggc ttcaccttgc aggagcagat ctatatcacc cggggtgaag tggccacgct
     1141 cgagcttcag ccgaggccgg cggtcactac ccgtctcagg gtaagtctgt tttggctggg
     1201 caaagag
//
LOCUS       DASRPQ010001717         1443 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4268255, whole genome shotgun sequence.
ACCESSION   DASRPQ010001717 DASRPQ010000000
VERSION     DASRPQ010001717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1443
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4268255"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..234)
                     /locus_tag="VFD73_19495"
     CDS             complement(<1..234)
                     /locus_tag="VFD73_19495"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HZI76160.1"
                     /translation="MTVRAAAVVLSGGGAKTAAHLGACRALREAGFDPVWYIATSMGA
                     VVAAGLASGVGNDELLDQMAVLGRRGLVRDPLAQ"
     gene            complement(231..674)
                     /locus_tag="VFD73_19500"
     CDS             complement(231..674)
                     /locus_tag="VFD73_19500"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HZI76161.1"
                     /translation="MSYSVGQITTFVMPHMQNVRGDLFGGELMALVDQAAAVAAIRHA
                     GGPAVTASIERVDFRERIPVGALVTCSATVDYVGNSSMDITVEVYAEHVSSGQKRHTH
                     TAHVVFVALDENGTPVRVPRLVPETAEERRRYAQAEAQHRSKRST"
     gene            complement(737..>1443)
                     /gene="nadE"
                     /locus_tag="VFD73_19505"
     CDS             complement(737..>1443)
                     /gene="nadE"
                     /locus_tag="VFD73_19505"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HZI76162.1"
                     /translation="GVDSSLVAYLATEALGAPNVMGVRMPYRTSSPDSLAHAQMVIEA
                     LGIPSRTVDISSSVDALAQAVGAAGEPSRLGNIMARTRMITLFDMSAALRALPLGTGN
                     KTERLFGYFTWHADDSPPVNPIGDLFKTQVWALARHLGVPEVIVSKPASADLIKGQTD
                     EGDFGISYPRADAILHWILMGYKAPEIAALGFSSQEIALVRQRLDSTHWKRRLPTVAM
                     LSGTAIGEYYLRPVDY"
BASE COUNT          252 a          474 c          467 g          250 t
ORIGIN      
        1 ctgcgcgagt ggatctcgta cgaggccacg ccgtcccagc accgccatct ggtccagcaa
       61 ctcgtcgttc ccgactccgc tcgccagccc ggcggcgacc accgccccca tcgatgtggc
      121 aatgtaccag accgggtcga accccgcttc cctgagtgcc cgacaggcac ccaggtgcgc
      181 cgcggtcttc gcacctccac cactcaggac aacagcggca gcgcgaacgg tcaagtgctc
      241 cgcttcgagc ggtgttgggc ttccgcttgg gcgtagcgcc ggcgctcctc agcggtttcc
      301 ggcaccagtc gggggaccct cacgggcgtg ccgttctcat ccagcgcaac gaagaccaca
      361 tgcgcggtat gggtgtggcg cttttgcccg ctgctcacgt gctcggcgta gacttcgacg
      421 gtgatgtcca tggaagaatt cccgacatag tcgaccgtcg cactgcacgt caccagcgca
      481 cccacgggaa tccgttctcg aaagtccact cgctctatgc tggcggtcac tgccggtccc
      541 ccggcgtggc ggatggccgc gacagcggcg gcctgatcga ccagggccat gagctcgccg
      601 ccgaacagat cgccccggac gttctgcatg tggggcatga cgaacgtggt gatctggccg
      661 accgagtagg acatcgggcg ggaatcaggg ctcatagcgg cagccgtggc cacgatccgg
      721 gttcccgggt ccggcctcag taatcaactg gtctcaggta gtactcgccg attgcggtcc
      781 cgctcagcat ggcgacggta gggagccggc gcttccagtg cgtcgaatcg agccgctggc
      841 gtaccagggc aatctcctgt gagctgaatc ccagggccgc gatttccgga gccttatagc
      901 ccatcaaaat ccagtgcagg atggcatccg ctctggggta agagattccg aagtcacctt
      961 cgtcggtctg ccccttgatg aggtcggcac tggcgggctt ggaaactatg acctcgggaa
     1021 cgcccaggtg gcgggcgagc gcccagacct gggtcttgaa cagatcgccg ataggattga
     1081 ccggcggcga gtcgtcggca tgccaggtga agtagccgaa tagacgttcg gtcttgttgc
     1141 cggtccccag cggaagggcg cgcaacgccg ccgacatgtc gaacagggta atcatccggg
     1201 tgcgggccat gatgttcccc aaccgagacg gctcaccagc ggcgccgact gcctgggcca
     1261 gtgcgtcaac cgagctggag atgtccacgg tgcggctggg aattcccaga gcctcgatga
     1321 ccatctgggc gtgcgccagg ctatcagggc tggaagtgcg atagggcatt ctgacgccca
     1381 tcacgttcgg ggcgcccagc gcctcggtcg cgaggtacgc gaccagtgag ctgtcgaccc
     1441 cac
//
LOCUS       DASRPQ010001718         1755 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1135002, whole genome shotgun sequence.
ACCESSION   DASRPQ010001718 DASRPQ010000000
VERSION     DASRPQ010001718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1755
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1135002"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VFD73_19510"
     CDS             complement(<1..183)
                     /locus_tag="VFD73_19510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76163.1"
                     /translation="MEPRGQVVKAMAMIRRPRDGALLVSEEANPSGELFHRPLGGHVE
                     FGEYAPEGVADMAADQR"
     gene            505..>1755
                     /locus_tag="VFD73_19515"
     CDS             505..>1755
                     /locus_tag="VFD73_19515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76164.1"
                     /translation="MIIDANRVDPNARVTADVCIIGAGAAGITLALELSRNDISAVLL
                     TGGQKRERRWDRDLYRGVTDQSYPHEPLEQGRRRAFGGTTIAWGGRCMPLDPIDFEKR
                     PWIPGSGWPISYADLLPHYTRAIELCEASPFSFEAGETFGPERAPMINGFDGAEVTSS
                     RLERWSPPTNFAKRYAPELRRSSLLRVLVGGHALHIQVKATGRSIDYIRAAAQPGREF
                     FIHARIYVLAAGGLENPRLLLVSNDVHTSGIGNSAGLVGRYYMTHLLGAPLKVSFADR
                     GPAFHYDFERDGAGVYCRRRFALTPLAQEQRQIGNASASLHRPPIADATHGNAVFSAA
                     FLAKQYADAFKNGGPRDLRVRLRKDSHVRREHWEVIRQVSSGSAIEISKIFRSRYLVS
                     RRLPMVLPDRSVSEHYLHYQAEHAP"
BASE COUNT          318 a          571 c          546 g          320 t
ORIGIN      
        1 ccgctgatct gcggccatgt cggccacccc ctcgggcgcg tactcgccga actcgacatg
       61 accgccgagt gggcggtgaa acaactcccc cgacgggttc gcctcctccg acaccagcaa
      121 cgcaccgtca cgcgggcgcc ggatcatcgc catcgccttg acgacctggc ctctgggttc
      181 caccggtatt tggtatcaca ccgggccgag cggctatggc aggcctggga tgcccgcgga
      241 cctgcagttc ctggggaatg gtgaccccgc ctttgctgac cgggtgccgc gggactatcc
      301 taggtcagcg cttgctgcct gctaaagcag atgccccccg cctgagccaa acccaaggtc
      361 gttgactgct tgctgagtgc ctaccggcgg agggatacgc gtggctgttc agatggttcc
      421 cgcggcggag cctccgtccg cgaccgaacc gggtggatcc agaacccatg actggcaccg
      481 gtcaggaacg ggaaccagcc cgagatgatt atcgacgcga atcgtgttga tcccaacgcg
      541 cgtgttacgg cggatgtatg tattatcgga gccggagccg ccgggatcac gcttgcactc
      601 gaattgagcc gcaatgacat ctcggctgtg ctgctgaccg gcggtcagaa gagggagcgg
      661 cgctgggatc gcgaccttta ccggggtgta acggaccagt cctacccgca cgagccactg
      721 gaacagggcc gccggagggc attcggtggc accaccatcg cgtggggcgg ccgatgcatg
      781 ccgctcgacc ccatagactt cgaaaagagg ccatggatcc ccggcagcgg ctggcccatt
      841 tcctacgccg acctgctccc gcactatacc cgcgccatcg agctgtgcga agccagtcct
      901 ttctcgttcg aggcgggtga gacattcggg cccgagcggg cgcccatgat caatggattt
      961 gacggggcag aggtaacgtc ctcgcggctt gagcgctgga gccctcccac gaattttgcg
     1021 aagcgttatg cgcccgagct tcggaggtcc tctcttctgc gggtcctggt gggcgggcac
     1081 gctctgcaca ttcaggtgaa ggccaccgga agatccatcg actacatccg ggccgcggct
     1141 cagccgggac gcgaattctt catccatgca cgtatctacg tcctggcggc cggcggactc
     1201 gaaaatcccc ggctgctcct ggtctccaac gatgttcaca ccagcggcat tgggaactcg
     1261 gcgggcctcg taggccgcta ctatatgacg caccttctgg gtgcgcccct gaaggtgagc
     1321 tttgccgatc gcggcccagc cttccactat gacttcgagc gggacggagc cggtgtgtac
     1381 tgccggcgcc gattcgccct gacacctctt gcccaggagc agcgccagat cggcaatgca
     1441 tcggccagcc tgcaccgtcc tcccatagcg gatgccacac acggaaacgc ggtattctct
     1501 gccgcctttc tagcaaaaca gtatgcggat gcattcaaga atggcgggcc acgtgacctc
     1561 cgcgtaagac tccgtaaaga ctcacatgtg cggcgggagc actgggaggt gatcaggcag
     1621 gtctcgtccg ggtccgccat agaaatatcg aagattttcc gcagccggta cctcgtgagc
     1681 aggcgcctgc cgatggtgct gccggaccgg tcggtgagcg agcattatct gcactatcag
     1741 gcggagcacg cacct
//
LOCUS       DASRPQ010001719         1326 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_511463, whole genome shotgun sequence.
ACCESSION   DASRPQ010001719 DASRPQ010000000
VERSION     DASRPQ010001719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1326
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_511463"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..812
                     /gene="ppk2"
                     /locus_tag="VFD73_19520"
     CDS             <1..812
                     /gene="ppk2"
                     /locus_tag="VFD73_19520"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR03707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006793 - phosphorus metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HZI76165.1"
                     /translation="DSEAESTSGPPPRMKRKEYEQEMRLLHGELVAMQEWVKGSGAKI
                     CIVFEGRDTAGKGGTIKRITERVSPRVFRVYALPAPSEREKSQMYLQRYVPHLPAAGE
                     VAIFDRSWYNRAGVERVMGYCTPAETERFLEQVPAVEKAMVDSGIYLLKYWLEVGADE
                     QTRRLQSRMQDPRKIWKLSDMDLKSYSRWYDYSRARDAMFAATDTPWAPWYVAYTDDK
                     KRGRLNIISHLLSQIPYKPLTPRDVSLPRRQRRGNYVEPELTVRYVPTPFG"
     gene            888..>1326
                     /locus_tag="VFD73_19525"
     CDS             888..>1326
                     /locus_tag="VFD73_19525"
                     /inference="COORDINATES: protein motif:HMM:NF014609.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HZI76166.1"
                     /translation="MTGSSANLTVNVLRVFVDESGEFGNLLGIVDGEAVPSDQRQQVA
                     AAVGYSETVFVEDPDVGQVQIFTPAVELPFAGHPTVGTAWWLRRQGHGAAQLLTRAGP
                     VDVTHEETLTWIRARAGWTTPFEWHEMPDQQAVDRADPADYPGG"
BASE COUNT          260 a          418 c          428 g          220 t
ORIGIN      
        1 ccgattccga agcggagtcg acatccgggc cacctccgag gatgaagcgc aaggagtacg
       61 agcaggagat gagactcctg cacggcgagc tcgtcgctat gcaggagtgg gtcaaggggt
      121 ccggagccaa gatctgcatc gtgttcgagg gccgggatac cgctggaaag ggtggcacga
      181 tcaagcgaat caccgagcgc gtgagcccac gggtatttcg ggtctatgcg ttgcctgcac
      241 ccagcgaacg cgagaagtcc cagatgtacc tgcagcggta tgtcccgcac ctgccggccg
      301 ccggcgaggt ggcgatcttc gaccgcagtt ggtacaaccg ggccggcgtc gagcgggtca
      361 tgggttattg caccccagcg gagactgagc gatttctcga gcaggtaccg gccgttgaga
      421 aagccatggt cgattccggg atctacctgc tcaagtactg gctcgaagtg ggcgcagacg
      481 aacagacccg aaggctgcag agccggatgc aggacccgcg gaagatctgg aagctgtcgg
      541 atatggatct gaagtcctac agccgctggt atgactactc cagagcccgg gatgcgatgt
      601 tcgcggcaac cgacaccccg tgggcgccct ggtacgtcgc atataccgat gacaagaaac
      661 gcggccgcct caacatcatc agccacctgc tcagccaaat cccctataaa ccactcaccc
      721 cgcgagacgt gagcctgccc cgacggcagc ggcgtggcaa ctatgtcgaa cctgagctga
      781 ccgtgcggta cgtcccgacg ccattcggat agccggcgta cctgcgcacc tggggtgtcc
      841 gacgccttgg cgcgtcctgg gcagcccatc ccggtagcgt tcctggggtg acgggaagct
      901 cagcgaacct caccgtaaat gtgcttcgag tcttcgtcga cgagtccggc gagttcggca
      961 acttgctggg catcgtcgat ggcgaggccg ttccatcgga ccaacggcag caggtcgcgg
     1021 ctgccgttgg ctactccgag acggttttcg tcgaagatcc agatgtcggg caagtccaaa
     1081 tcttcacccc ggccgtcgag ctgccgtttg cgggtcatcc gactgttggc acggcgtggt
     1141 ggctgcggcg gcagggccac ggtgccgcgc aactactcac ccgcgccggc ccagttgacg
     1201 tcactcacga agagaccctc acctggatcc gagcccgagc gggatggacc acgcccttcg
     1261 agtggcacga gatgcccgac cagcaggcag tcgaccgagc cgatccagcg gactaccccg
     1321 gcggtc
//
LOCUS       DASRPQ010001720         1589 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2744334, whole genome shotgun sequence.
ACCESSION   DASRPQ010001720 DASRPQ010000000
VERSION     DASRPQ010001720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2744334"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..660
                     /locus_tag="VFD73_19530"
     CDS             <1..660
                     /locus_tag="VFD73_19530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76167.1"
                     /translation="YEIFWDTTFKGKVGIYDDYREAISMALLKNGITDLNTGNPKNIN
                     EAQKTLISLINAVNVRTSTNGVYIGIPKGTYDIHQAWSGDMVAAWQYTPTQNMKTWQT
                     LGYWFPSSRKGAVFNDTITIPANAQNPVLAHHFLDWMMTFKNSMLNFSWNGYQPPQRK
                     ADPETLTTTKSYYGEPYVFPWLSDAVVRESDFHTGYFEEELTPQVDQLWHNAWQAFNS
                     A"
     gene            788..>1589
                     /locus_tag="VFD73_19535"
     CDS             788..>1589
                     /locus_tag="VFD73_19535"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI76168.1"
                     /translation="MLILFALPFYVVVSIAFGTVDPVFQSPLPVYEPWWWTQRYLLEE
                     WHLVTGQFRAVELRTLAYVVLATAICLVIAYTVAYYVARFGGKRKGLFLVLLIAPFFI
                     SYLMRMLSWVELLQPNGYVNSLLTFLHITPHPVNWLGGVPFTVVMGLVYGYIPYMILP
                     LYGFLDRIDQSHLEAGRDLGANPFSTFIRVTLPLSKPAILASLVIVTLPMFGDYYTNN
                     LLSGSPKTTMFGNLLDNAMEATGQGPEAAVLVLFLVLFLMIPMLYYMRE"
BASE COUNT          308 a          493 c          467 g          321 t
ORIGIN      
        1 tatgaaatct tctgggacac cacgttcaag ggcaaggtcg ggatttatga tgattaccgc
       61 gaagccatct ccatggcttt gctgaagaac ggcatcaccg acctgaacac cgggaacccg
      121 aagaacatca acgaagcgca gaagacgctg atatcgctga ttaacgcggt gaacgtgcgg
      181 accagcacca acggtgtcta catcggtatc ccgaagggca cctacgacat ccatcaggcc
      241 tggtcgggag acatggtggc ggcctggcag tacacgccga cgcagaacat gaagacgtgg
      301 cagacgctcg ggtactggtt cccttcgagc cgcaagggcg ccgtcttcaa cgacacaatc
      361 actattcccg ccaatgcgca gaacccggtg ctggcgcatc acttcctcga ctggatgatg
      421 acgttcaaga attcgatgct gaatttctcc tggaatgggt atcagccgcc gcagcgaaag
      481 gccgatcccg agacgctcac cacgaccaag agctactacg gagagccgta cgtgttcccg
      541 tggctgtctg acgcggtggt gcgcgagagc gacttccaca ccgggtactt cgaagaggag
      601 ctcacgcccc aggtagatca gctgtggcac aacgcatggc aggcgttcaa tagtgcctga
      661 ccggccggcc tctcagcctc gccgccgggt aaaggtcctg ccacggaagc agccgcgcga
      721 tgatgcctcg ggggcctggc atccgcactg gtactggccg gggttcgcgc tgcctggcac
      781 gctgtggatg ctgatactct tcgcgctgcc gttctatgtg gtcgtctcga tcgcattcgg
      841 cacggtcgat ccggttttcc agagcccgct gcccgtgtac gagccatggt ggtggaccca
      901 gaggtatctg ctggaggagt ggcacctcgt taccggccaa ttccgggccg tggagctgcg
      961 cacgctcgcc tatgtcgtcc tggcaaccgc catctgcctg gtgatcgcct acacggtcgc
     1021 gtactacgtg gccaggttcg gaggcaagcg aaaggggctt ttcctggtgc tcctgatcgc
     1081 gccgttcttc atcagctacc tgatgagaat gctgtcctgg gtcgagctcc ttcagccaaa
     1141 cggctatgtg aacagcctgc tgacgttcct tcacatcacg ccgcatccgg tcaactggct
     1201 cggcggggtg ccgttcaccg tcgtgatggg cctcgtgtac ggctatatcc catacatgat
     1261 cttgccgctc tacgggttcc tcgaccggat cgaccagagc catctcgagg cagggcgtga
     1321 tctcggggcg aacccgttct cgacgttcat acgggtgacc ctgccgctgt cgaagccagc
     1381 gatactggcc agcctggtga tcgtcaccct gcccatgttc ggcgactact acacgaacaa
     1441 cctgctctca ggctccccga agaccacgat gttcgggaat ctgctcgata acgccatgga
     1501 ggcgaccggc cagggcccag aggccgccgt cctggtcctg ttccttgttc tgttcctgat
     1561 gatcccgatg ctgtactaca tgcgcgaaa
//
LOCUS       DASRPQ010001721         1642 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4268727, whole genome shotgun sequence.
ACCESSION   DASRPQ010001721 DASRPQ010000000
VERSION     DASRPQ010001721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1642
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4268727"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1642
                     /locus_tag="VFD73_19540"
     CDS             <1..>1642
                     /locus_tag="VFD73_19540"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HZI76169.1"
                     /translation="QLDELVTTATGQQSRLEIGNSIATIEASKVAEEAPITEFTNLLS
                     GRAAGVEVLKSSGATGTGTKIRIRGSNSVSLSNEPLYYVDGVRIDANPNGYAYNIGGQ
                     STSRINDLNPDDIENIEIVKGPSAATLYGIQAANGVVLITTKRGVSGKPRWNAFTEQG
                     IVTDPNTYRTNYFGRSDNPDFDPATGDASGCTLLLQAQGACVQTRIDTYNPLNDPAQR
                     PLAPGHRQQYGLNVAGGTDAATYYISGEYEGEVGVYKMRGFDFDSVNQATKGNVPGEQ
                     LRPNDLSKLSLRANGTAKVSSKADLQLSLGYVTSQLHLLENDNTLNSVIGSGDGSGYP
                     QDINRGWYLVPAEVFAERNRQGIGRFTGGLTANWRPLTWLTTRATFGYDVTNRQDTQF
                     WPTGEINPSAYPTQNEGELDVTRAQTSQLSVDLFSAASYQLSSAWNGRTAVGGQFFRN
                     LNTNSFAQGRGLARGTESIFGSATTDASDDYVESRSAGGFVDQQMSYRNRLFLTAGLR
                     LDDNSAFGKNFNTRPLPKLSVSWVAREQRDQGTLNTLRL"
BASE COUNT          355 a          526 c          478 g          283 t
ORIGIN      
        1 tcagctggat gagctggtca ccaccgccac cggacagcag agcaggctcg agatcggcaa
       61 ctcgatcgcg acgatcgagg cctccaaggt ggccgaagaa gcaccgatca cagaatttac
      121 caatctgttg agtgggagag cggccggcgt agaggtgctc aagagcagcg gtgccactgg
      181 aacgggcacc aagatccgca ttcggggctc caacagcgtc tcactctcca acgaaccact
      241 gtactacgtc gatggcgtcc ggatcgatgc caacccgaac ggctacgcct acaacatcgg
      301 aggccaatca acttcccgca tcaacgatct caatcccgac gacatcgaga acatcgagat
      361 cgtgaagggt ccgtctgcgg cgaccttgta cggcatccag gccgccaatg gcgtcgtgct
      421 cattaccacc aagcgaggcg tgagcgggaa gccgcgctgg aacgcgttca ccgagcaggg
      481 catcgtcact gatcccaaca cctaccggac gaactatttc gggcgctccg acaatcctga
      541 tttcgatccg gccaccggtg acgcctcggg gtgcaccctt cttctgcagg cgcaaggcgc
      601 ttgcgtgcag actcggattg atacctacaa tccgctgaac gatccggctc aacgtccgtt
      661 ggctccggga caccgccagc agtacgggct gaatgtggcc ggcggaaccg acgcggcgac
      721 gtactacatc tctggggaat acgagggaga ggtcggcgtc tacaagatgc gtggattcga
      781 cttcgactcc gtcaaccagg cgaccaaagg aaacgtcccc ggcgagcagc tccggcccaa
      841 cgatctgagc aagctgagcc tccgcgccaa cggcacggca aaggtctcct ccaaagccga
      901 cctgcagctc tcgctcgggt acgttaccag tcagctgcac ctcctggaaa atgacaacac
      961 cctgaactcc gtcattggaa gcggcgatgg cagcggctac ccgcaggaca tcaatcgtgg
     1021 ctggtacctg gtgccggcgg aggtctttgc ggagcggaat cggcagggca tcggacgatt
     1081 caccggcggg ctcacggcga actggcggcc gcttacgtgg ctcaccacca gggctacctt
     1141 cgggtacgat gtgaccaacc ggcaggacac gcagttctgg cccaccggcg aaatcaaccc
     1201 ctccgcctat cctactcaga atgaaggcga gctcgatgtt acccgggctc aaacatccca
     1261 gctgtcagtg gatctcttct ccgctgccag ctatcagctc tcctctgcct ggaacggcag
     1321 aaccgccgtc ggaggccagt ttttccggaa tctcaacacc aacagctttg cccaaggacg
     1381 aggtctggcc cgtggcaccg agtccatctt cggctcggcg acgaccgatg catcggatga
     1441 ctatgtggag agccggtccg ctggtgggtt tgtcgatcag cagatgagtt atcgcaaccg
     1501 cctattcctg acggccggcc tccggctgga cgacaacagt gcatttggaa agaacttcaa
     1561 caccaggcca cttcccaagc tgagcgtttc gtgggtggcg cgggagcagc gggatcaggg
     1621 gaccctcaac acccttcggc tc
//
LOCUS       DASRPQ010001722         1823 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_511645, whole genome shotgun sequence.
ACCESSION   DASRPQ010001722 DASRPQ010000000
VERSION     DASRPQ010001722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1823
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_511645"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(495..818)
                     /locus_tag="VFD73_19545"
     CDS             complement(495..818)
                     /locus_tag="VFD73_19545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76170.1"
                     /translation="MASLMLQYDRPTDHTRNWNDYNGRVRDWITRLLQTPGAVSFMAY
                     RTVDGASPNTTTMLEFRTHEDARRAAGSDHLKTILQEMRSTGMDHPRVLVVERSPFTP
                     EPLQP"
     gene            complement(1055..>1823)
                     /gene="ltnD"
                     /locus_tag="VFD73_19550"
     CDS             complement(1055..>1823)
                     /gene="ltnD"
                     /locus_tag="VFD73_19550"
                     /EC_number="1.1.1.411"
                     /inference="COORDINATES: protein motif:HMM:NF043037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="L-threonate dehydrogenase"
                     /protein_id="HZI76171.1"
                     /translation="GAHGAVTPAALGPHVEALIIVVVNAQQTEAVLFGDQGAAATMPR
                     GSIVIASATVSPEFAQHLGGRLDAIGLELIDAPISGGAAKAASGEMSVMASGRPQAFA
                     RCEALFHAIATRVYRLGDKPGAGSTVKMINQLLAGVHIAAAAEAMALGIRAGADPEQL
                     YDVICNSAGGSWMFQNRVAHILAGDYTPLSAVNIFVKDLGIVLDYAKQSVFPLPLSAT
                     AHQMFMQASAAGYGGEDDAAVIKIFPGIDLPKPKQER"
BASE COUNT          334 a          567 c          584 g          338 t
ORIGIN      
        1 ctttatgcgt ggacctgttc gcccaggcgt attggaggct ttaacggtcc cttagcgcct
       61 tcgcgtgagc cttgtgacct ccactcccgt tccgtcggga gggcaagcac aggtccctcc
      121 agccaggctc ctatcctcct cacggacaga ggagcgcgaa cacaggaggg ttcgatgtgg
      181 ttttggtggc caatctggct cgcgtggtgg ttcccgccag tccgtcccgt tcatgaggtg
      241 gtcacggtcg acttcagcac gaagcgcgtg accgggcgcc tggtcaccta agggaggggc
      301 caatgaacct gctcgccaag ctcggtcttg tcctcgttct gatcgcgtcc actcgcaact
      361 caatgcgcgc ccgctaatac caagtccctg aaggggtgac tcgtttgggt ttgacgggtt
      421 tgaggcgggt catgtccatc ggcctgagag actgggccca taggttctga tcaccgggac
      481 ttggtataag gccctcacgg ctggagcggc tcgggcgtga acggcgagcg ctcgaccacg
      541 agcactcggg gatggtccat ccccgttgag cgcatctcct gaaggatggt cttcaggtgg
      601 tcggatccag cagcccgcct cgcatcctca tgcgtgcgaa actccagcat cgtggtggtg
      661 ttcgggcttg cgccatccac cgtgcgatag gccatgaacg agacagctcc gggcgtttgc
      721 aacaggcgcg taatccagtc ccggacccga ccgttgtagt cgttccagtt ccgggtgtgg
      781 tccgttggac ggtcatactg aagcatgagg ctggccatgg gtcctctcct taagacaagg
      841 gcatcgtgaa cccggcctag cttctcgtcc agcgcgcgcg agcgcccata cgggccaagg
      901 cgtgcgccca acgcacgatg ccttcgaacg cgggcggcac ggccgtaatc gcggcggcgt
      961 tcgggtacgg agggaagagg tgaagaggcg ttccgccgta accgtgcttg agcgggaaag
     1021 tcacaaagaa cggcaggcgc ggtagcagaa cgacctaccg ctcctgcttc ggcttcggca
     1081 ggtcgatccc gggaaagatc ttgatgaccg ccgcatcgtc ctcaccgcca tagcccgcag
     1141 cggaggcctg cataaacatc tgatgggccg tggccgacag aggcaacgga aagacgctct
     1201 gtttcgcgta gtcgagcacg atgccgagat ccttgacgaa gatgttcacg gcagagagtg
     1261 gggtatagtc ccccgcgagg atgtgcgcga ccctgttctg aaacatccag gaaccgcctg
     1321 cactgttgca gatcacgtca tagagctgtt cggggtcggc tcccgcacgg atccccagag
     1381 ccatggcttc ggccgcagcc gcaatgtgaa cgccagccag gagctggttg atcatcttaa
     1441 ccgttgaacc agcgccgggt ttgtcgccga gccggtagac ccgagttgca atcgcatgga
     1501 acagcgcttc gcagcgggcg aaagcctgcg gccggcctga ggccatcacg gacatctcgc
     1561 ccgaggccgc tttggcggcg ccgcccgaaa tgggcgcgtc gatcagctca agcccgatcg
     1621 cgtccagccg gcctccgagg tgttgggcaa actctggaga gaccgtggca ctggcaatga
     1681 cgatcgagcc gcggggcatc gttgccgcag caccctgatc gccgaacagg accgcctccg
     1741 tttgctgcgc attgaccaca acgatgatca gcgcttccac gtgcggcccg agcgcagcag
     1801 gcgtgactgc cccatgagcg ccg
//
LOCUS       DASRPQ010001723         2078 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3674265, whole genome shotgun sequence.
ACCESSION   DASRPQ010001723 DASRPQ010000000
VERSION     DASRPQ010001723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2078
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3674265"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..382)
                     /locus_tag="VFD73_19555"
     CDS             complement(<1..382)
                     /locus_tag="VFD73_19555"
                     /inference="COORDINATES: protein motif:HMM:NF024931.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium chelatase domain-containing protein"
                     /protein_id="HZI76172.1"
                     /translation="MPLARTHSVALVGVTGHVVEVEADIANGLVGTILVGLPDAALRE
                     ARDRIRAAIVNSGEVWPQRKITVGLSPASLPKRGSWFDLAIAIGVLTAAGRVPRAAVD
                     GVMFFGELGLDGRLRPVRGVLPAVA"
     gene            complement(385..747)
                     /locus_tag="VFD73_19560"
     CDS             complement(385..747)
                     /locus_tag="VFD73_19560"
                     /inference="COORDINATES: protein motif:HMM:NF009154.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HZI76173.1"
                     /translation="MAMRAKDVLGKSGEQAATVYLESCGLRILDRNWRCATGEIDIVA
                     VERCTLVVVEVKARTGMRYGSPLEAVSRAKRARLRRLAVQWLNAHGVRFDQVRIDVVG
                     LVYDGTGGFSIEHIRGVG"
     gene            complement(1098..1559)
                     /locus_tag="VFD73_19565"
     CDS             complement(1098..1559)
                     /locus_tag="VFD73_19565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76174.1"
                     /translation="MDTLSNTSDTNYELPLSEADQTALRPALLHDLGALPFRPGALIS
                     RSLWVIFIGKWGVWTHATLPVDDRLGMPDKENITGLCDLVGSLIRPPLCHDDENAIIV
                     LRRPGSVKISEADGYIFRLMRQAAASRETAPWAFYLVGPDGMREVSEDEGQ"
BASE COUNT          373 a          705 c          649 g          351 t
ORIGIN      
        1 ccgccacggc gggaaggacg ccgcgaaccg gccgtagccg accatccagg ccgagttcgc
       61 cgaagaacat caccccgtcc actgccgccc tcggcaccct tcccgccgca gtgagcaccc
      121 cgatggcgat ggctaggtcg aaccaactgc cgcgcttggg caagctggcc ggggagagcc
      181 cgaccgtgat cttccgctgc ggccatacct cgccgctgtt gacgatcgcg gcccggatcc
      241 ggtcccgcgc ctcccgcagc gcggcatcgg gcaggccgac caggatcgtc ccgaccagtc
      301 cgttcgcgat gtccgcctcg acctcgacca catggccggt cacgcccacc aaggccaccg
      361 agtgggtgcg ggccagcggc acggctaccc caccccgcgg atgtgctcga tgctgaaccc
      421 gccggtgccg tcgtagacca gacccaccac gtcgatacgg acctggtcga accggacacc
      481 gtgggcgttc agccattgca ccgcgagccg ccgaagccgg gcccgcttgg cccggctgac
      541 ggcctcgagc gggctgccgt accgcatgcc agtcctggcc ttgacctcga cgaccaccag
      601 cgtgcagcgt tcgacggcca cgatgtcgat ctcgcccgtg gcgcagcgcc agttgcggtc
      661 gaggattcgc aacccgcacg actccaggta tacggttgca gcctgctcac cggatttgcc
      721 gagcacgtcc ttggcacgca tcgccatcac ctccggctcc gacgatcgcg gtaacggggg
      781 gttaccagca gattggtatc tccggctgtg gaaaacccca ggcgaagctt cgcgctggtg
      841 gagatcgggc caggaatgtc ggtgctcggt gatttaatcc gccgggggtg actagcaaac
      901 gctggggagc aggtccggat aaccgacaaa accagggact ctagcagtca tcggcgggcg
      961 tgatccgaac ccgcagctta gtactccaac cggactcgtg acctgcggtg caggagtggt
     1021 ggacgcgaag cggccaccgc ttgatgatca tggtttgtga taactcatga caatccggcg
     1081 gtggcgccaa ccgtgtgcta ttggccctcg tcctcactca cctctcgcat gccgtcgggc
     1141 cccaccaggt aaaatgccca aggtgcggtc tctcggctgg cggctgcctg gcgcattagg
     1201 cggaagatgt acccatccgc ctcgctgatc ttcaccgaac cgggcctgcg aagcacgata
     1261 attgcgttct catcgtcatg acatagaggt ggcctgatga ggctgccgac caggtcacac
     1321 agcccggtga tgttctcctt gtccggcatg ccaagcctgt catcgacagg caaagtcgcg
     1381 tgggtccaga ctccccattt gccgataaag atcacccaga ggctgcgact gatcagcgca
     1441 cccggcctga acggcagggc tccgagatcg tgaagcaagg ctggccgcag cgcggtttga
     1501 tcagcctcgc ttagcggaag ctcgtagttg gtatccgatg tgttgctgag agtgtccatg
     1561 actcgtgagt gtcgcacctg gcaccgacaa aacggcgggt gccgacctct ccgtacatcg
     1621 cgcgtgcagc aatgagcacg gcctcggcac cgggaacagg ctccgccgct caagaggcag
     1681 gcatcgttgc ggcttttcga tttccaccgc cggctcgccc atgctctcgc cctccaacct
     1741 ggaggagaac gactccgagg ccagcgcaat gtcgtcatcc attcccatct cggcgcgcgg
     1801 attgatgccg gtaaaagcag cggcagcacg cgcaggtctt tcggacggcc actgactcct
     1861 tggaccggat cacatcggcg aggtctgcag gagtggcctg gcgccatgcc tgaagctgtc
     1921 catcgcggcg acgccgctcc gattcggagc gaccggcttc cagcccggca agtatgtcgt
     1981 catgcggatc gtaggccgcc gagtgcaggc ggagatcgaa gccacgcgcg cagcagcctc
     2041 agcagcgtgg taagggtcgg ctgccgctgg tcacgttc
//
LOCUS       DASRPQ010001724         1936 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_827204, whole genome shotgun sequence.
ACCESSION   DASRPQ010001724 DASRPQ010000000
VERSION     DASRPQ010001724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1936
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_827204"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..630
                     /locus_tag="VFD73_19570"
     CDS             <1..630
                     /locus_tag="VFD73_19570"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HZI76175.1"
                     /translation="EVFDPYRIEGIAHNTADLVARIEILDSLEAAIADCVFTAVLTAR
                     ERAAKRTVLRPREAAVTLLHEAAAGPVAIVAGREDSGLTNAELDLCQVLVTIPTDPAH
                     PSLNLAQAVAIMAYESWVASGGETFPLKPPRNQAAPATAGQLEQLFADWAAALTAIDF
                     FKTRRPEHVMRSFREIVYRAAPDGREASLLRAIGIEVVRFLERTIRRGS"
     gene            630..1148
                     /locus_tag="VFD73_19575"
     CDS             630..1148
                     /locus_tag="VFD73_19575"
                     /inference="COORDINATES: protein motif:HMM:NF024076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3788 family protein"
                     /protein_id="HZI76176.1"
                     /translation="MGRSRAYWASNLYPDELQEPEPTAPLRDLPPALASRFKAVRDGL
                     LALPEIAEQVRFMGATWRWTWEYGMGNRKLCWLHLMKGSVDVTFTLSEGDESRLARSG
                     RVAGAIARALVEGQRTGPVKWCWLELSDKRTIDAFLSLARRKAEWLSERPAPRRAPRL
                     HRAKGGEAAETD"
     gene            1256..1852
                     /locus_tag="VFD73_19580"
     CDS             1256..1852
                     /locus_tag="VFD73_19580"
                     /inference="COORDINATES: protein motif:HMM:NF014176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HZI76177.1"
                     /translation="MMMRKLAFVVGGVAAGGVATLLTLSCSAPRAQQTAAADSIRAPV
                     IAASDSGKLQGPRQPIFFRHDIHAGLYKIQCQYCHYSVAVSPEPGIPSVQTCMGCHLV
                     IGGRDSTHKAEIKKLRQAWTDKKPIEWIRIHYLPRHAHFPHQRHIRALGPNACGTCHG
                     EVQRMPQVFKVNNVDRMGFCITCHTQRNVSRDCSVCHY"
BASE COUNT          371 a          602 c          597 g          366 t
ORIGIN      
        1 gaggtgttcg atccgtaccg catcgagggc atagcccaca ataccgcaga tctggtcgcc
       61 cggatcgaga tcctcgactc actggaagct gcaatagcgg attgcgtgtt cacggcggtt
      121 ctcaccgctc gagagcgcgc cgccaagcgc accgttctgc ggccgcgtga agcggcggtg
      181 accttgctcc acgaggccgc cgctggacca gtggccatcg ttgcgggccg ggaggacagc
      241 gggctcacca atgccgagct ggatctctgt caggtgctgg tcaccatccc gaccgatccg
      301 gctcaccctt ctctgaatct ggcgcaagcc gttgccatca tggcctatga gagctgggtg
      361 gcatccggcg gcgaaacctt tcccctcaag cctccgcgaa accaggctgc gccggcgacg
      421 gcggggcagt tggagcagtt gttcgccgat tgggctgcag cgctcaccgc gatcgatttc
      481 ttcaagaccc gtcgaccgga acacgtcatg cgatcgttcc gggagattgt ctaccgcgcc
      541 gcccccgacg gcagagaagc ctccttgctc cgagcgatag gcatcgaggt cgtccgcttc
      601 ctggaacgca ccatccgccg aggatcatga tgggacgctc gagagcatac tgggcatcga
      661 atctctatcc ggatgaactc caggagccgg agcccaccgc gccactccgg gatctccctc
      721 cagcgctagc gagccgcttc aaggcggtcc gcgatggtct cttggctctt ccggagattg
      781 ccgagcaggt gcgcttcatg ggggctacgt ggcggtggac ctgggaatac gggatgggca
      841 accgcaaact ctgctggctg cacctgatga aaggaagcgt ggatgtcacc tttactctct
      901 cggaggggga cgagagccgg ttggccagga gcggccgagt ggccggagcg attgcgcgag
      961 cgctggtgga aggccaacgc accggtccgg tgaaatggtg ctggcttgag ctcagcgaca
     1021 aacgaaccat cgatgctttc ctgagtcttg cccgacggaa ggctgagtgg ctcagcgaac
     1081 gacccgcgcc gcgacgagca cctcgactgc atcgcgcgaa gggcggcgag gcagccgaaa
     1141 ccgactgaac tagtcggaat aaccgcagca atttgggttg tataatcgtc tgcgtggact
     1201 atacttcggc gcgcaatggc cgagggcggg gccagggttc ttccttacgg gtgagatgat
     1261 gatgcgtaag ctggcattcg tcgtcggtgg cgttgcagcc ggaggcgtgg ctactctcct
     1321 tacgctcagc tgttctgccc cccgcgccca gcagaccgca gcggcagatt cgattcgagc
     1381 tcccgttatc gctgcctccg acagcggcaa actgcagggg cctcgccaac cgattttctt
     1441 ccggcacgat attcatgccg gcttgtacaa gatccaatgc caatactgcc attactcggt
     1501 cgctgtctca ccggagccag ggattccttc ggtgcagacc tgcatgggct gccatctggt
     1561 cattggtgga cgcgacagta cgcacaaggc cgagatcaag aagttgcgtc aggcatggac
     1621 cgacaagaaa cctatcgaat ggatccggat ccactatctg ccgagacacg ctcacttccc
     1681 gcatcagcgt cacatccgag ccctgggtcc caacgcctgc ggcacctgcc acggtgaagt
     1741 gcagcggatg cctcaggtat tcaaggtcaa taacgtagat cgcatgggat tctgcatcac
     1801 ttgccacacg cagcggaacg tctcgcgcga ctgctcggta tgtcactact agtcgcgagt
     1861 cacgagtcgc gagtcgcggg ttccactccg ccttcgaaga ttgagcccca gtggcccttc
     1921 gaatacatga ctcgcg
//
LOCUS       DASRPQ010001725         1601 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1795317, whole genome shotgun sequence.
ACCESSION   DASRPQ010001725 DASRPQ010000000
VERSION     DASRPQ010001725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1601
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1795317"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(69..239)
                     /locus_tag="VFD73_19585"
     CDS             complement(69..239)
                     /locus_tag="VFD73_19585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76178.1"
                     /translation="MLQFLSGWLDRDPARLGPSLAQFVGHPAYGFAQLRQDLERFVFL
                     LGGSDGEPLSGP"
     gene            complement(441..1007)
                     /locus_tag="VFD73_19590"
     CDS             complement(441..1007)
                     /locus_tag="VFD73_19590"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HZI76179.1"
                     /translation="MRLNITDPVGIWDVVLSCVSDAEVQDREGNSGRGFTNLKRILGH
                     PAPFAFVVDQLARTVPPEHAVVGCDEGAWALVGALALRLAVPAVLIRRVPKTYFVSYG
                     DDPSVGDGRLVGERLPAGTPVHLIDDLIYSGHTLRSALDALELVGLTATSASAILWTR
                     RAEDAVRELAERGLQSVTCLISQTQESG"
BASE COUNT          304 a          532 c          507 g          258 t
ORIGIN      
        1 aagcaacggc tgactgtgct tcccctcggc caggcagcgg gcagcaaagg cgcttgagcc
       61 cttccctgtc atgggccaga gagcggttcg ccgtcgctgc cgccgagcag gaagacgaac
      121 cgctccaggt cttggcgcag ctgggcgaag ccgtaggcgg ggtggccgac gaactgtgcc
      181 agcgaggggc cgaggcgggc ggggtcgcgg tccagccagc cgctgaggaa ttgcagcatt
      241 tccgcgagtt cggcggctgg gcctctgtga tccgccaaca gatccgcgac acatgtctgc
      301 cagctgacgt gcgacaggtc tagaagcctg ccgatcacat gacgggcggc accgcacggg
      361 tctgtttgat gagcggatgt tctgggctgg cagctatgac ggcctgggcg acactgaccg
      421 tggcgtgccg agcggcatct ctagccggat tcttgcgtct ggcttatcaa gcaggtcacc
      481 gactggaggc ctcgctcagc cagctcacga accgcatcct ctgcccgtct cgtccacagg
      541 atcgcagatg ccgaggtggc ggtgaggccg acgagttcca gggcgtccaa cgccgagcgc
      601 agggtatggc cagagtagat caagtcatca atcagatgga ccggagtccc agcgggaagg
      661 cgctccccaa ccaagcggcc atccccgaca ctcgggtcgt cgccgtagga gacgaagtag
      721 gtcttcggca cccgccggat caacacggct ggcactgcaa gcctgagcgc aagggctcca
      781 acaagcgccc aggccccctc gtcgcagccg acgaccgcat gctcgggcgg cacggtgcga
      841 gcgagctggt cgacgacgaa ggcgaagggg gccgggtgac cgagtatgcg cttgaggttt
      901 gtaaagccac ggcccgagtt gccttctcga tcctgcacct cggcgtcgct gacacaacta
      961 aggacaacgt cccatatgcc gaccgggtca gtgatgttca gcctcactcg tccacttcac
     1021 ccgataccaa cagcacccgc aaaccgcccc tcagatcgct cgaacgagca tgcttaccgg
     1081 ataacgccgc cttgtccggc cgccgacaac acgggctcca gtgcctcaga gagtgaacgc
     1141 cgtggccacc tgaggcgtcg ccacctgttg cccactcatc ggttacctct tccatctgcg
     1201 ccccgcctct cccttcccca acctgccagg agatgccgcc cgggaaccgg ggcgaacgga
     1261 agaaactgac ccgcgtgctc gcagcaacaa tgaaccgccc cttgaagacc ggctcccagc
     1321 gccaggctca cttacggcct cggccgcacc aagtaacaac gacgtcgcgg gcggcaccag
     1381 ccgcaatttt cacgccagta cggcgtcgcg cgcagcgata ccgagggctc acttggttac
     1441 tcggcacccg ccggatcagc cggtggctgg tcagtgtcac gggcgcggag ctattcgggt
     1501 cgaaggcgta gcgccctgct gagagtgttc atgggtgtcc gtgagatcca tgcgtgtacg
     1561 aggcgaatcg tcagtcagtt ggtcaccctg gacggattca a
//
LOCUS       DASRPQ010001726         1242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_512097, whole genome shotgun sequence.
ACCESSION   DASRPQ010001726 DASRPQ010000000
VERSION     DASRPQ010001726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512097"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..553)
                     /locus_tag="VFD73_19595"
     CDS             complement(<1..553)
                     /locus_tag="VFD73_19595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76180.1"
                     /translation="MAKATGGYIQQLPSGSFRVSVYAGTDPLTGRQIRLRKTCKTERA
                     AQIELGKLLEQAAAGRQPETDATVAQLMDRYLEIADWDLSTRKANEVYIRRVIKPALG
                     HLQVRKIRGPLLDLLYAQLRRCSDPGCTGKRFIEHRNVPILTVDPACRRPTWQHVADA
                     IRDAIGSGVLAAGDSLPSVREMSA"
     gene            complement(632..706)
                     /locus_tag="VFD73_19600"
     tRNA            complement(632..706)
                     /locus_tag="VFD73_19600"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(672..674),aa:Lys,seq:ttt)
     gene            complement(801..>1242)
                     /locus_tag="VFD73_19605"
     CDS             complement(801..>1242)
                     /locus_tag="VFD73_19605"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HZI76181.1"
                     /translation="LSEARFGIAWGVTGAARTCLESAIEYAKTREQFGKPIASFQLTQ
                     AKLSWMAADLYRSQLLALHLGRLKEAGSVSPVQVSVAKMTNVRSALDIARQARTVLGA
                     SGVTLEYPPIRHANNLEAVLTYEGTEEIHTLAIGQALTGISAYR"
BASE COUNT          195 a          415 c          412 g          220 t
ORIGIN      
        1 gggcgctcat ctcacggaca gaaggcaacg agtcgcccgc ggcgagcacc ccagagccga
       61 tcgcatccct gatcgcatct gccacgtgtt gccaggtcgg tcgacggcaa gcaggatcga
      121 cggtgaggat cggcacgttc cggtgctcga tgaaccgctt gcctgtgcac ccaggatcgc
      181 tgcagcggcg cagctgcgcg tagagcaggt cgagcagagg cccgcgtatc ttgcggacct
      241 ggaggtgccc gagcgctggc ttgatcaccc gccggatgta gacctcgttc gccttgcgcg
      301 tggacagatc ccagtcagcg atctcgaggt accggtccat cagttgcgcc acggtggcgt
      361 ccgtctcggg ctggcggcca gctgcggcct gctcgagcag cttgccgagc tcgatctgcg
      421 cggcccgttc ggtcttgcag gtcttccgca ggcggatctg ccggcccgtc agcggatcag
      481 tcccggcgta gacactcacg cggaacgaac cgctggggag ctgctgaatg taaccgcctg
      541 tggccttggc catgacagca cgataacccg gctaggcgta tccgtgccac aacccgtgcc
      601 acgcccaacc atctgttgga tatgttttac ctggtggggc gccagggggt cgaaccctga
      661 accaatgggt taaaagccca ctgctctgcc attgagctaa cgccccgcag cgccgaacga
      721 gccgacgcca gctagacgct ggctgtgccg gcgtctagag acgaagcgta ccgacttcgc
      781 ggcccggtcg ctccctgagg ttagcggtac gcggatatcc cggtgagggc ctggccgatg
      841 gccagcgtgt ggatctcctc ggtgccctcg taggtcagca cggcctccag gttgttggcg
      901 tgccggatgg gcgggtattc cagcgtcacg ccgctggctc cgagcaccgt ccgggcctgc
      961 ctggcgatgt cgagcgccga ccgcacgttg gtcatcttgg ccacgctgac ctgcaccggg
     1021 ctgaccgaac cggcttcctt cagccgcccg aggtgcagcg cgagcagctg cgagcggtac
     1081 aggtcggccg ccatccagct tagtttggcc tgggtcagct ggaaagacgc gatgggcttg
     1141 ccgaactgct cccgggtctt ggcgtactcg atcgcgctct ccaggcaggt ccgggccgcc
     1201 ccggtgactc cccacgcgat gccgaacctg gcttcgctca gg
//
LOCUS       DASRPQ010001727         2701 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2745018, whole genome shotgun sequence.
ACCESSION   DASRPQ010001727 DASRPQ010000000
VERSION     DASRPQ010001727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2701
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2745018"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1528)
                     /locus_tag="VFD73_19610"
     CDS             complement(<1..1528)
                     /locus_tag="VFD73_19610"
                     /inference="COORDINATES: protein motif:HMM:NF014826.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HZI76182.1"
                     /translation="MDSVKDYMDKKAVAQVLEQIAAFLELKSENPFRIRAFRTAARAV
                     TSFPGELRQSLEDGSLAAAKGIGPATLQIVGELVSTGRARMLEELRQQIPPGLVEMLE
                     ISGLGVAKIRQIHDVLGIDSLPELEAAAHDGRLAKLPRFGPRTSENILKAIAFLRKAG
                     SYRLYHHARDEAEGLRAALGRLPGVTSAIVAGDVRRRSEVVRDLIVVLVADSSPAALF
                     QHLKQLPGVHEFAGQDERRLTLRFAGGASAQVVATTPVNVGTVLVQATGSEDHLRDLA
                     AWATEKGFALSGAALWRGSQFVATPDEETFYRALGLSLIPPELREGRGEIAAAAHGEL
                     PRLVERRDLKGFLHCHTNYSDGSNSVEQLATAAKAAGYEYLGVTDHSQAAAYAGGLSA
                     EDLARQADEIDEVNARLHGFRVLKGIEADILQDGSVDYEERVLERLDFVIASVHSRFN
                     MGEKEMTARMLRAMDNPYLTIIGHPTGRLLLSRDPYPVDLEAVLDKAAATGVALEING
                     D"
     gene            complement(1528..2247)
                     /locus_tag="VFD73_19615"
     CDS             complement(1528..2247)
                     /locus_tag="VFD73_19615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76183.1"
                     /translation="MSAARASPFNLVFRESADTAFPAIREALMRGGRNPRSRDDFLMM
                     PESVSLVRELRPDEGLGEGIDRLAALVHHAYLYWDEGQRTIALSPAELETMLSTDFLT
                     MPRSARPEPAFYAELPLRRVWAEVVEGQPPEPLDGCFVHHSERTGNLRVLGVFGMHPE
                     RSGFSVAEVEGPRVTRLQRADGTALFSPILPGGSLARLFSVAGGEELLELGWRIELGA
                     EAAELGAHGSLSGRIAPGQES"
     gene            complement(2289..>2701)
                     /locus_tag="VFD73_19620"
     CDS             complement(2289..>2701)
                     /locus_tag="VFD73_19620"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI76184.1"
                     /translation="NLAPELQRQRAALRESGLREQDPALYAQRLFELSVAPYFFDPSK
                     AQELTPFRVTGRTQQEVWSSLDDYDLRSSLQTLQIPALLLQGENDVIPADNGRTLARL
                     LRGELHLLPHCGHVPYVEAFPEFVRLLNAFLPRA"
BASE COUNT          505 a          891 c          815 g          490 t
ORIGIN      
        1 gatcgccgtt gatctccagc gcaacaccag tagcagctgc tttgtccaga accgcttcga
       61 gatctacagg ataggggtcg cgggagagca ggagccgtcc cgtgggatgc ccgataatcg
      121 tcagatatgg attgtccatc gcccgtaaca tgcgggcggt catctccttc tcccccatgt
      181 tgaagcgact gtgtaccgag gcaatgacga agtccagacg ttccagaact cgttcctcat
      241 aatcgacgct tccgtcttgc aggatgtcgg cctcgattcc cttgagcacc cggaagccat
      301 gcaggcgagc attcacttca tcgatctcgt ccgcctgccg ggccagatct tccgccgaca
      361 atccaccggc gtaagcagcg gcctggctgt gatcggtcac gccgagatac tcatagcccg
      421 ctgccttggc ggctgtcgcc agctgctcca cagagttgga gccgtccgag tagttggtgt
      481 ggcagtgcag gaatcccttc aggtcgcgcc gttcgaccaa ccggggcagc tcgccgtgag
      541 cggcggccgc gatctcgccc cgtccctctc gcagctcggg aggaatcagg ctgaggccca
      601 acgcgcgata gaaggtctcc tcatcgggag tagccacgaa ctggctgcct cgccacaggg
      661 ctgcgccgct caaggcaaac cccttctccg tggcccaggc agccagatcc ctgaggtggt
      721 cctcactccc ggtcgcctgc accaggacgg tgccgacatt taccggcgtg gtcgcgacca
      781 cctgtgcact ggcgcctccg gcaaaccgaa gagtaagccg acgctcatcc tgaccggcga
      841 attcatgcac ccctggcagc tgcttcaagt gctggaacag cgcggcgggg gaggagtcgg
      901 ccaccagtac tacgatgagg tctcgaacca cctccgagcg tcggcgcacg tccccggcca
      961 caattgcgct ggtcactccc ggcagtcgcc cgagcgctgc cctcagtccc tccgcctcat
     1021 ctctggcgtg atgatagaga cggtacgagc ctgcttttct gagaaaggcg attgccttca
     1081 gaatattttc ggaggtgcga gggccgaacc gtggcagttt tgcgagccgt ccgtcgtgcg
     1141 ccgcggcttc cagctcgggc agcgaatcga ttcccagcac atcgtgaatt tgacggatct
     1201 tggcaacgcc cagaccggag atctcgagca tctccaccag gccgggcgga atttgctgtc
     1261 ggagctcctc gagcatgcga gcccgtccag tcgagaccag ctcgccaacg atctggagcg
     1321 tcgcgggtcc gattcccttg gcggcagcaa gcgacccgtc ctccagcgac tgacgcagct
     1381 ctccaggaaa actggtgacc gctcgcgcgg ccgtccggaa tgcccggatg cggaacggat
     1441 tctcgctctt cagctccagg aaggcggcga tctgctccag cacttgagcg accgccttct
     1501 tgtccatgta atccttgacg ctgtccatca gctctcttgg cccggggcaa tgcggccgga
     1561 gagactaccg tgggctccca gctccgctgc ttctgctcca agctctattc tccatcccag
     1621 ctccaataat tcctctcccc ccgccaccga gaagagtcgg gccagggacc cgcccggcag
     1681 gatcggagag aacagcgctg tcccgtccgc ccgctgcagc ctggttactc ttggcccttc
     1741 cacctcggcc acgctgaaac cagaccgttc cggatgcatt ccgaacacgc cgagaaccct
     1801 caggttccca gtccgctcgg agtggtgcac gaagcatccg tcgagcggct ccggcggctg
     1861 gccctctacc acctcggccc acacccggcg cagtggaagc tcagcgtaga acgccggctc
     1921 cggtctcgcg gatcggggca tagtcaaaaa gtccgtcgac aacatcgttt ccaactccgc
     1981 cggcgagagc gcgattgtcc tttgaccttc gtcccaatag agatacgcgt gatgaaccag
     2041 ggcggcgagc cggtcgatgc cctctcccag gccttcgtcg ggccgcaact cccggacgag
     2101 ggagacggac tctggcatca taaggaagtc atcccggctt cgagggttgc ggccgccccg
     2161 catgagggct tcgcggatgg caggaaaggc agtatcagcg gattccctga agacgagatt
     2221 gaacggtgat gctcgcgcgg cagacatagt gggaatctag cgggagccgc tgggttggtc
     2281 cccgaggctc aggccctagg cagaaatgcg ttcaataaac gaacgaactc agggaacgcc
     2341 tcgacataag ggacgtgtcc acagtgcggg agaaggtgaa gctcgcccct gagcagtcga
     2401 gccagcgtgc gcccgttgtc cgccggaatc acatcgtttt ccccctgcag cagcagcgcc
     2461 ggtatctgta gagtctgcag actggaccgg agatcgtagt catcgagact ggaccagact
     2521 tcctgctggg tgcggccggt gactcggaag ggagtcagtt cctgtgcctt cgagggatcg
     2581 aagaagtacg gcgccaccga gagctcgaag agccgctgag catagagggc ggggtcctgc
     2641 tcgcgcagac cgctctcgcg cagcgccgct cgttggcgct gcagctccgg agccaaattc
     2701 c
//
LOCUS       DASRPQ010001728         1058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_827761, whole genome shotgun sequence.
ACCESSION   DASRPQ010001728 DASRPQ010000000
VERSION     DASRPQ010001728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_827761"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(304..>1058)
                     /locus_tag="VFD73_19625"
     CDS             complement(304..>1058)
                     /locus_tag="VFD73_19625"
                     /inference="COORDINATES: protein motif:HMM:NF023516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3570 domain-containing protein"
                     /protein_id="HZI76185.1"
                     /translation="LNYLLDLNQRNTTLQFGVAHNFDRLTAGLFLGPETERKESTDVL
                     LGITQVLTPTTLANATLTLGTASGYLSDPYKGFRFTGYPDPNVLLPERRPGHRTKQIV
                     SSSLHQFIEPLRGSAELTYRFYHDSFGLWAHTVTLEWFQKLGRRVTVAPLVRYYEQSA
                     ADFYRLSFDADPSDPDNPNNGLIPQHYSSDYRLTRLRSLTYGLGVTAHLRRWLWLDAA
                     YKRYDLRGLDGRTDSSNFPRANIWTIGLRLNY"
BASE COUNT          191 a          317 c          367 g          183 t
ORIGIN      
        1 cacgactttg ccctggaggt ccgacggcac ggttccttcc aggcccacct tggccagatc
       61 gggaaacata tcccccacgc gcagcggcgc gttcgtgggc gcggcttccc ccgcctggat
      121 cgaatccggc gtcgtcagag actgggtcag cgtcagcccc aacaagaggc ggacggcgac
      181 ccccaggccc cgacgccgga cgcggggatg cggacgcccc gcgacagcag ggctgttcgg
      241 aaacgctggc gcgttggggt gcgatgcggt gcgatggctc atcggtctcg tgtcatgctc
      301 tcatcagtag ttcaggcgca gtccgatcgt ccagatgttt gcccggggaa aattgctcga
      361 atcggtccgc ccgtccagac cgcgcaggtc gtaccgtttg tacgcggcgt ccagccagag
      421 ccagcgacgc aggtgggcgg tgacgcccag gccgtaggtc agcgaccgca ggcgggtgag
      481 ccggtagtcg gaggagtaat gctgcgggat gaggccgttg ttcgggttat ccggatcgga
      541 gggatcggcg tcgaagctca gccggtagaa gtctgccgcc gattgttcgt aatagcgcac
      601 cagcggcgcc acggtcacgc gccggcccag cttttggaac cactccagcg tcacggtgtg
      661 cgcccaaagc ccaaacgaat cgtgatagaa gcggtaagtc agctcggccg aaccacgcaa
      721 cggctcgatg aactggtgca gcgagctgga gacgatctgc ttcgtgcgat gaccggggcg
      781 gcgttccggt aataacacgt ttggatccgg gtaaccggtg aatcgaaagc ccttatacgg
      841 gtcggacaga tagccgctgg cggtgccgag ggtgagcgtc gcgttggcca gcgtggtcgg
      901 cgtgagcacc tgcgtgatcc ccagcaggac atcggtggac tccttgcgct cggtttccgg
      961 gccaagaaac agcccggccg tcaggcgatc gaaattgtgg gccaccccga attgcaacgt
     1021 ggtgttgcgc tggttcagat ccagcaggta gttgaggg
//
LOCUS       DASRPQ010001729         1066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1795857, whole genome shotgun sequence.
ACCESSION   DASRPQ010001729 DASRPQ010000000
VERSION     DASRPQ010001729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1795857"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..238)
                     /locus_tag="VFD73_19630"
     CDS             complement(<1..238)
                     /locus_tag="VFD73_19630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76186.1"
                     /translation="MRDEDPNVNETQAGVSRREFLKISAVTVAVPAVVGPTVIEVDGQ
                     QIPVHGPGKVPVTLTVNNKKYTANLEPRVTLLDAL"
     gene            677..>1066
                     /locus_tag="VFD73_19635"
     CDS             677..>1066
                     /locus_tag="VFD73_19635"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HZI76187.1"
                     /translation="METQTHRPTWKTLLAFAIIYLVWGSTFLAIRVGVREVPPFLLAG
                     IRFSIAGLALCGWMAAQGERLPTGRQWKSVLVLAVLIFVIDYGLLFWAEQRVPSGTAA
                     VMVATIPVFMTLSEIALLGTQKLTARLT"
BASE COUNT          190 a          289 c          385 g          202 t
ORIGIN      
        1 ggagggcatc aagcagcgtg acgcggggct cgaggttcgc ggtgtacttc ttgttgttga
       61 cggtgagcgt caccgggacc ttgcctgggc cgtgcaccgg gatctgctgg ccgtcgactt
      121 cgatgacggt gggcccgacg acggcaggca ccgcgacggt gacggcagag atcttgagga
      181 actcgcggcg ggagacgccc gcctgagttt cgtttacgtt gggatcttcg tctcgcatcc
      241 tggcctcctc caccccagcg tcaaggccgg cgccggagaa cccgggctcc gcatctgggg
      301 ttacgttggc cgcccagtgt tccgggcggg aagtcagcaa gagttaagaa gtttcaacat
      361 gtgagagcga gcgccatcct tgaaagcgag ccagtataaa tcccgggtaa ggggacgaac
      421 aaatggtccg atgttcggag gggggaaggg ttacgttttg gcgagttcgt cggtcggcgg
      481 cccttcacca ccaggatacg gaggaagagc aaccaacccg gtcgttgtcc acggagcgaa
      541 gcggacccgt catcgcggga tgagtggcac ctccccgaca gcgagcacac gcgatccaat
      601 agaaaaggag ctgctgagga gcggcaagca tcagttcctc tagcttccga agtcagctct
      661 ggtatcccgc agacatatgg aaacgcagac gcatcggccg acgtggaaga cgctgctggc
      721 tttcgccatc atttacctgg tgtggggatc gacgttcctg gcgattcgag tgggagtgcg
      781 cgaggtgccg ccgttcctgc tggccggaat acgcttctcc atcgcggggc tggcgttgtg
      841 cggctggatg gcggcgcagg gcgagcgctt gccgacaggg cggcagtgga agtcggtgct
      901 ggtgctggcg gtgctgatct tcgtgatcga ttacgggctg ttgttctggg cggagcagag
      961 ggtgccgtcg ggcacggcgg cggtaatggt ggcgacgatc ccggtattca tgacgttgtc
     1021 ggagatcgcg ctgctgggca cgcagaagct gacggcccgg ctgacg
//
LOCUS       DASRPQ010001730         2795 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3018176, whole genome shotgun sequence.
ACCESSION   DASRPQ010001730 DASRPQ010000000
VERSION     DASRPQ010001730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2795
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3018176"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..2367)
                     /locus_tag="VFD73_19640"
     CDS             complement(106..2367)
                     /locus_tag="VFD73_19640"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HZI76188.1"
                     /translation="MLALLLLVQGPLGAAVVEGKGSPTAPVPRLESAVQIDGKLDEPV
                     WSHAVRLTGFWQYQPVDGRPAEEQTEVLVWYAADAIYFGIIAHDRNPAAIRSTVADRD
                     NIDNDDRVVIDLDTFHDRRRAFFFGVNPLGVQSDGVRSEGAGQVSSLIPGSTDLNPDF
                     TWESKGQLTSGGYQVEIRIPFRSLRYPGSGSQTWGFNVTRIVQRTGYTDTWTNVRRAN
                     ASFLGQEGALSGLHDLRHGVTVDAQPFVTATADGVRDGSGRFNREDVNPDAGLNLRLG
                     FSSYALDATANPDFSQVESDVGQVTVNQRFALFYPEKRPFFLEGIELFGSPQTLVYTR
                     RIVNPNAGAKFTGKFGHLGVAHLSALDQPGGADALFNITRLRRDFGSNSIAGITFTNR
                     DQTDNHNRVLAGDFRYVWSLYYVQLQYGRSWTSSPLNNRNAPIWQAEWDRTGRSWGFN
                     YLLNGIGPGFNDEAGFVNQLRSGVVNGHFFNRITFYGARGALLENFTTFFGPERTWLY
                     DDFGFKPGLEGREQLDGTFQLRGGWALNGHFERNFVNFQDSSYAGYTVGSASGLAFQP
                     DEHFSGFTWQAKVTTPTWRKLGAVLTYVRGRMAIFQEGTTGTGWLLTGQLDVRPVTTV
                     RVSATTTVFRLFHLDGSEFARSTIPRLKLEYQPNRSLFFRAVGEYRSDRTAPLIDAGT
                     GAPLFVNGAAPSQVDFNGLRVDFLASFEPTPGTVAFLGYGSSLESDEEFNWSRLHRTN
                     DGFFLKLAYQVRR"
     gene            complement(2378..>2795)
                     /locus_tag="VFD73_19645"
     CDS             complement(2378..>2795)
                     /locus_tag="VFD73_19645"
                     /inference="COORDINATES: protein motif:HMM:NF020135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ketopantoate reductase C-terminal
                     domain-containing protein"
                     /protein_id="HZI76189.1"
                     /translation="IVAEMWIKFLFISALSGVGAITRAPIGILRSKPETRALLIQALE
                     EARAVAEGHQVRLPANVVDQLMGFIDRLPEHGTASMQRDIAAGKPSELFAQSGAVMRL
                     GQEVGVPVPVHTLIYQSLLPLEQRAREKETSRILKS"
BASE COUNT          545 a          885 c          839 g          526 t
ORIGIN      
        1 accatccgaa gagagccccg aggaatagcg cagcccccac gttcctcacg ttcctcacgt
       61 tgccctcggc gacctcgcct gcggctcggt tccccacgtt tccgcctacc gtctcacctg
      121 gtacgccaac ttcaggaaga acccatcgtt cgtgcgatgc agccgagacc agttgaactc
      181 ctcgtcgctc tcgagggagc tgccgtagcc cagaaatgct actgtaccag gggttggctc
      241 gaaggaagcc aggaagtcca ctctgagtcc gttgaagtcc acctgcgatg gtgccgcccc
      301 attgacgaag agtggagcac cggtaccggc atcgatcagc ggcgcagtac gatcggacct
      361 atactcgccc acggcacgga agaagagcga ccggttgggc tgatactcca gcttgagtcg
      421 cggaatggtc gaccgggcga actcgctccc gtccaggtgg aataaacgaa agacggtcgt
      481 agtagctgaa acgcgcaccg tggtgaccgg ccggacatcc agctgcccgg tcagcagcca
      541 acccgtgccg gtggtccctt cctgaaagat ggccatccgt ccccgcacat aggtcaacac
      601 cgcacccagt tttcgccacg tcggcgtggt gactttggcc tgccaggtga accccgagaa
      661 gtgctcatcc ggttggaagg ccagacccga ggcgctcccg acggtgtagc ccgcatagct
      721 gctgtcctgg aaattcacga agttgcgctc gaagtgcccg ttcagcgccc agccgccgcg
      781 gagctgaaag gtgccgtcga gctgttcccg tccttcgagt ccgggcttga acccgaagtc
      841 atcatagagc caggtgcgct caggaccgaa gaaagtcgtg aagttttcca ggagtgctcc
      901 tcgcgcgcca tagaaggtga tgcgattgaa gaagtggcca ttcacgaccc cgctgcgaag
      961 ttgattcacg aacccggcct catcgttaaa cccggggccg attccgttca gcaggtagtt
     1021 gaaaccccac gaccgcccgg tccggtccca ctctgcctgc cagatcggag cattgcgatt
     1081 gttcaagggg ctgctggtcc aggaccgacc gtactgcagc tggacatagt agaggctcca
     1141 gacgtaccga aaatcccccg ccagaacccg gttgtgattg tcggtttgat cccggttggt
     1201 aaaggtgatc cccgcaatcg agttgctgcc gaagtctcga cggagccggg taatgttgaa
     1261 caaggcatcg gcaccaccgg gctgatccaa cgcgctcagg tgcgcgaccc caaggtggcc
     1321 gaacttgccg gtgaacttgg ccccggcgtt cgggttcacg atccggcggg tatagaccag
     1381 agtctgaggc gagccgaata actcgatgcc ctccaggaaa aacggccgct tctccgggta
     1441 gaacagggca aagcgctggt tcaccgtcac ctggccaacg tcgctctcca cctggctgaa
     1501 atccggattg gccgtggcat cgagggcgta gctgctgaaa ccgagccgca ggttgagccc
     1561 tgcgtctgga ttcacgtcct ctcggttgaa ccgtccactc ccatctcgca ctccgtccgc
     1621 cgtggcagta acgaagggtt gggcatccac cgtcacgcca tggcgtaagt cgtggagtcc
     1681 actgagcgcg ccttcctggc ccaggaagct cgcattggct cggcggacat tggtccaggt
     1741 gtcggtgtat ccggtgcgct gaacgatgcg agtgacgttg aagccccagg tctgggaccc
     1801 gctgcctgga tagcgaagac ttcgaaacgg gatcctgatc tcgacctgat agccgccgga
     1861 cgtgagctgt cccttggatt cccaggtgaa atccggattg agatcggtgc tgccggggat
     1921 caggctgctg acttggccgg cgccttcgct gcgtaccccg tcgctctgga cacccagcgg
     1981 gttcactccg aaaaagaacg ctcggcgccg gtcgtgaaag gtgtccagat cgatcactac
     2041 gcgatcgtcg ttgtcgatgt tgtcccggtc ggccaccgtc gagcggatcg ctgccgggtt
     2101 ccggtcgtgt gcgatgatgc cgaagtagat cgcatcggcg gcataccaca ccagcacttc
     2161 ggtctgttct tcagccggcc ggccgtcgac cggctgatac tgccagaacc cggtcagccg
     2221 aacagcgtgg gaccagaccg gctcatccag ttttccatcg atttgcaccg cgctttcgag
     2281 gcgcggtacc ggtgcggtgg gcgagccctt tccctcgacc acagcggccc caaggggacc
     2341 ctggaccagt agaaggagcg cgagcacgtt gaaagatcta cgatttgagg atccgagagg
     2401 tttccttctc cctggcccgc tgctccaacg gcagaaggct ctgatatatc agggtatgca
     2461 ccggaaccgg gacaccgacc tcctgtccca ggcgcataac cgcaccgctt tgggcaaata
     2521 actctgaagg ttttccggcg gcgatgtcgc gctgcatcga cgcagtcccg tgctccggaa
     2581 gacgatcgat gaatcccatc aactgatcca ccacattcgc cggcagccgg acctggtgtc
     2641 cctcggcaac ggcgcgggct tcttccagtg cctggatgag cagggctcga gtctccggct
     2701 tgctgcggag gatcccgatc ggtgcgcgag tgatcgcccc tacaccgctc aatgccgaga
     2761 tgaagagaaa cttgatccac atctcggcca cgatg
//
LOCUS       DASRPQ010001731         2018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4269887, whole genome shotgun sequence.
ACCESSION   DASRPQ010001731 DASRPQ010000000
VERSION     DASRPQ010001731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2018
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4269887"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..445)
                     /locus_tag="VFD73_19650"
     CDS             complement(<1..445)
                     /locus_tag="VFD73_19650"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta"
                     /protein_id="HZI76190.1"
                     /translation="MKIAVCIKRVPDMEMRFAIAPDRKSLDQGGMKYEMGDFDGYALE
                     VALQLNEKEGQGEVVVVSLGPDGVQETLRKALAMGATRAVQLKADDVPVDGMAIAQAL
                     AQELGAAQYDLILFGRMATDTAHGTVGPMTAELLDLPCVTAISELN"
     gene            complement(487..1374)
                     /locus_tag="VFD73_19655"
     CDS             complement(487..1374)
                     /locus_tag="VFD73_19655"
                     /inference="COORDINATES: protein motif:HMM:NF017373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76191.1"
                     /translation="MQATAIAVPVRDTGDALRASLAGALNTLLSAIPRIIGFAVVLIV
                     GWIIASLLAKGVRALLHAVRFNDLAYRSGFAGFVQNMGVKDDSAGVIAGIVKWFVRLI
                     ALVVAFDTLGLPAVSNVLQQLLLWLPNLVVALVVLVVGGLAAKALSQLVRGASAEAGI
                     SNPGTLATITRVAVWAFTIVVAVNQLGIATTLINTLLIGVVGALSIAVGLAFGLGGRD
                     RAARWLDSLALDHAGPRLERAAQAAEHRVPSMSDQPQPGLAPQRAAPSPDWVERATID
                     RRRVERPGLKDRRGNGGNV"
     gene            complement(1466..1624)
                     /locus_tag="VFD73_19660"
     CDS             complement(1466..1624)
                     /locus_tag="VFD73_19660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76192.1"
                     /translation="MAEISSNIRASQFDLLLGLGTAIQSGRRQLLVELRAYGGTVIYL
                     PLTFGVTF"
     gene            complement(1698..>2018)
                     /locus_tag="VFD73_19665"
     CDS             complement(1698..>2018)
                     /locus_tag="VFD73_19665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76193.1"
                     /translation="GGMVVLPVGLQFGADARYTGSQWLRGDEANETTPLGGYFEGNLR
                     AGFSRARWEISAVISNVLNSHRPIFGTFNENRQTGALERFLTPLNARSIKIIVRRAFG
                     AASD"
BASE COUNT          406 a          645 c          612 g          355 t
ORIGIN      
        1 tgttgagctc cgatatcgcg gtgacgcagg gaaggtcgag gagctccgcg gtcatgggac
       61 caacagtgcc gtgcgccgtg tctgtcgcca ttctcccgaa gaggatgagg tcgtactgcg
      121 cggccccaag ctcctgcgcc aacgcctgag cgatggccat gccgtcgacc ggtacgtcat
      181 cggccttgag ctgcaccgcc cgcgttgccc ccatggccag cgctttacgc agagtttcct
      241 gtaccccatc agggccgagc gacaccacca cgacttctcc ctggccctcc ttctcgttca
      301 gctgcagtgc gacctcgagc gcatagccgt cgaagtcgcc catctcgtac ttcattccgc
      361 cttgatccag cgatttccga tcgggtgcga tcgcaaaacg catttccatg tcgggcacac
      421 gcttgataca gacggcgatt ttcaaagtaa agctcccggt cgaacccgcg gcaaagctag
      481 ccgcgactag acattcccac cattacctcg gcgatccttc agaccgggac gctccacccg
      541 ccgccggtcg atcgtggcgc gttccaccca gtccgggctg ggagccgcgc gctgaggggc
      601 gagccccggc tgaggttgat cgctcatgct cggcacgcgg tgctcggccg cctgagctgc
      661 acgctcgagc ctggggccgg cgtggtcgag agcaagggag tcgagccagc gtgctgcacg
      721 atcccttccg cccaacccga aggcgaggcc caccgcaatc gagagcgctc cgaccacgcc
      781 gatcagcaaa gtgttgatca gcgtcgtggc aatgccgagt tggttgacgg cgaccacgat
      841 ggtgaacgcc cagacggcta cacgagtgat ggttgccagc gtgcccgggt tgctgatgcc
      901 ggcttccgcc gaggcgccgc ggaccagctg cgagagtgcc tttgctgcca gacctccgac
      961 gaccagcacg accaatgcga cgaccagatt ggggagccag agtagcagct gctgtagcac
     1021 attggacacg gccggaagtc ccagcgtgtc gaacgccacc accaatgcga tcagtcggac
     1081 gaaccacttg acgatgccgg cgatcacgcc cgccgagtcg tccttgacgc ccatgttctg
     1141 gacgaaacca gcgaatcctg agcgataggc cagatcattg aagcggacgg cgtggagcaa
     1201 cgcgcgaacg cctttggcca gcagagaggc gatgatccag ccgacaatga gaacaaccgc
     1261 gaacccgatg atcctcggaa tggcggagag taacgtgttc agcgcaccgg ccaacgatgc
     1321 tctcaacgca tcgcctgtgt cacgaaccgg cactgcaatg gctgtagcct gcataagacc
     1381 tccggcttct cctggtttgc cccctgaaaa acccggcaga caccatggcc cgatcacgga
     1441 ggtgggtcgg tgaccagggt cacgactaga aggtcacgcc gaaggtcaga ggaaggtaga
     1501 taacagtccc accatatgcg cgcagctcga ccagaagctg cctgcgtccg ctctggattg
     1561 cggtgccaag gcccaaaagg aggtcgaact ggctggccct gatattggag gatatttcag
     1621 ccatccagca gcagattcag ccgatgagcc gtgggctagg ctatgccatg gcgctttcag
     1681 cgtcaagctg gtcgaggtta gtcggaggcg gcgccgaagg cccggcgcac gatgatctta
     1741 atgctgcggg cgttgagggg ggtgaggaac cgctctagtg ctccagtctg tcgattttcg
     1801 ttgaaggtgc cgaagattgg ccgatgagaa ttgagaacgt tggagatcac ggcggagatt
     1861 tcccatcgtg cgcggctgaa tcctgcacgc aagttcccct cgaagtatcc ccccaacggc
     1921 gtcgtctcat tggcttcgtc tccccggagc cattggctcc ccgtatacct ggcatcagcc
     1981 ccgaactgaa gtccgaccgg aagcacaacc atgccacc
//
LOCUS       DASRPQ010001732         2294 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1475810, whole genome shotgun sequence.
ACCESSION   DASRPQ010001732 DASRPQ010000000
VERSION     DASRPQ010001732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2294
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1475810"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..581)
                     /locus_tag="VFD73_19670"
     CDS             complement(93..581)
                     /locus_tag="VFD73_19670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HZI76194.1"
                     /translation="MRIRPVLWQRRQSRGGFTLVEMAFAFAIIGIMSLMMIPRIQRSM
                     QAHQTRRAAIQVAGDVERAFTLAGRYRKPMRLSCVVVGGVCNNATYTIADRTGGTVRV
                     SRDLKNGGDLGTMTVVLSPVTTVDIFPSGVSTAADTIIVSSGASIRKVYVTTAGQVRI
                     LP"
     gene            complement(770..1024)
                     /locus_tag="VFD73_19675"
     CDS             complement(770..1024)
                     /locus_tag="VFD73_19675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76195.1"
                     /translation="MAGSFLLLRRTSRPQGLSLVELTLALVLLTAMLVSLAKQTGIFV
                     PSVSSCAARITAAEISRAGVGLIDLAPSYAERCSGVRAGL"
     gene            1366..1620
                     /locus_tag="VFD73_19680"
     CDS             1366..1620
                     /locus_tag="VFD73_19680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76196.1"
                     /translation="MNYSMRSRERILANLESIYRESYDRAKQAADQTRMIDLDSAYMR
                     DQLMLEILLDIRDLFSVAPAASGGSALEKLEAIRRLTRHP"
     gene            1631..>2294
                     /locus_tag="VFD73_19685"
     CDS             1631..>2294
                     /locus_tag="VFD73_19685"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZI76197.1"
                     /translation="MTASAGRLALVCVGLLLQACQLLPESRAELRPADMVIYGRVWTG
                     DSTRPWAHAVAISGDTISAVGDSAEIARLTGRSTRVISNGKAMVTPGFMDGHTHFIYG
                     GFQLTQVDLRDANTPAEFVRRIKAYAAKLKPGEWILGGNWDHERWPGTPLPDRSWIDS
                     VTPNNPVFVDRLDGHMTLANSVVLKLAHIDRSTKDVPGGTIVRRRDGEPTGVVKDAAQ
                     NLV"
BASE COUNT          461 a          678 c          734 g          421 t
ORIGIN      
        1 caggaccaga ccgagcgaaa gcacggtcat ggagatcaac acctccacca gggtgaaccc
       61 ggcgttgcgg cggcgactga cacgtggtgt cttcatggga ggatcctcac ttgcccggcc
      121 gtggtcacgt acactttccg gatgctggct ccggaagaca cgatgatggt atcggccgcc
      181 gtcgagacgc ctgacgggaa gatgtcgacc gtagtcaccg ggctcagcac caccgtcatg
      241 gtgccgaggt ccccgccatt tttgagatcg cgcgacaccc gaacggtgcc gccggtccgg
      301 tcggcgatgg tatacgtggc attgttgcag acgcctccga ccacgacgca ggagagtcgc
      361 atcggcttgc gatagcggcc ggccagcgtg aaggcccgct ccacgtctcc cgctacctgg
      421 atggcggctc ggcgggtctg atgggcctgc atcgatcgct gaatccgggg gatcatcatc
      481 aggctcatga tgccgatgat ggcaaaggca aatgccatct ccaccagggt aaaaccgccc
      541 cggctttggc ggcgctgcca aagaactggt cgtatgcgca tggtgccccg ctcgcgcagg
      601 aagagtgccg gggcagccct acattctaag ttgaggaagg gctgcacctt gagggagaag
      661 tgacaggctg tctcccggga aaagtctggc aaagtgaggc gtttggagcc gccagctttt
      721 gcgcgctatc ctgttgccct ttgcttcgtt acgcgtccgt tactcgggct caaaggccgg
      781 cgcgaactcc gctgcacctc tctgcgtagc tcggggccag atcgatcaga ccaactccag
      841 cccgagagat ttcagcggcc gtgatgcggg ctgcgcagct ggagacggag ggaacgaaga
      901 tgccggtctg tttggcgaga ctgaccagca tcgctgtcag gagaaccagc gccaatgtca
      961 actcgactag agagaggcct tggggacggc tggtacggcg tagcaacagg aatgaccctg
     1021 ccattgctgc ctccagtcgg gctggcagtg aaccacgaga tgttccggag gtggacccgt
     1081 tcggcagcct gaggagcacg aaaggtgccg cccgacgtca tgccgcatct cacggcgcta
     1141 gtgtaggtta agatgcggaa acagatctgg gagatgaaag gaatgtcgtc tcagccgaac
     1201 tcttgcacgc cgacgctttc tgcactcccc gtttgggaga gattcagcac tgagagtaag
     1261 ggggcagaga cttcggctca aaaacacctg gagggtaaac tccgtggcgg gcgaacgagg
     1321 actgtttagg tttacgttac ctctgtgccc tctaagccct ctgtggtgaa ctattccatg
     1381 cgctcaaggg aacgcattct cgccaatctc gaatcgatct accgcgaatc ctacgatcgc
     1441 gccaagcagg ccgcggatca gacccggatg atcgacctcg acagcgcgta tatgcgagac
     1501 cagctgatgc tggagatcct gctcgatatc cgggatctct tttcggtcgc gcccgcggca
     1561 tcgggcggaa gcgcgctgga aaagctcgaa gccatccgaa gactcaccag acacccctga
     1621 gatctcagca atgacagcat cggctggacg actcgccctg gtctgtgtgg gcctgcttct
     1681 gcaggcatgc cagctccttc ccgagtctcg cgcggagctt cggcccgctg acatggtcat
     1741 ctatggaaga gtgtggaccg gcgactcgac ccgcccttgg gcccacgcgg tcgcgatctc
     1801 aggagatacc atcagcgcgg tgggtgacag cgctgaaatc gcgcgactga cgggtcgatc
     1861 gacccgggtg atcagtaatg gcaaagcgat ggtgactccc ggcttcatgg acgggcacac
     1921 gcatttcatc tacggcggtt ttcagctcac ccaggtagac ctgcgcgatg ccaacacgcc
     1981 ggcggagttc gtgcggcgga tcaaggcgta cgccgcgaag ctcaagccgg gtgagtggat
     2041 tctgggcggg aactgggacc atgagcgctg gcccggaacg ccgctgccgg atcgcagctg
     2101 gatcgattcg gtgacaccga acaacccggt gttcgttgat cggctggatg ggcacatgac
     2161 cctggccaac agtgtggttc tgaaactggc ccacatcgat cggtccacca aagacgttcc
     2221 tggggggacg atcgtccggc gccgggacgg cgagccaacc ggagttgtga aggatgctgc
     2281 gcagaacctc gtct
//
LOCUS       DASRPQ010001733         5591 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3675255, whole genome shotgun sequence.
ACCESSION   DASRPQ010001733 DASRPQ010000000
VERSION     DASRPQ010001733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5591
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3675255"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1432)
                     /locus_tag="VFD73_19690"
     CDS             complement(<1..1432)
                     /locus_tag="VFD73_19690"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HZI76198.1"
                     /translation="MNLWATKSIAVLRAEAEETGERSLHRKLGPLNLTTLGIGAIIGA
                     GIFVLTGQAAALHAGPAVPISMILVGIACTFAGLCYAEMASTVPVAGSAYTYSYATMG
                     ELIAWIIGWDLVLEYAAGAATVGVGWSGHLVDLFKLFGITLPANLTMSPTRWCTAGEV
                     ARAVVGCGHDGLNFTGALLNVPAVFIVALMSTILVIGIKESASVNNFIVILKVTIVLL
                     IVAVGIKYVNPANWHPFIPPNQGEWGTYGISGILRGAGLVFFAYIGFDTVSTAAQEAK
                     NPQRDLPIGILGSLVICTTLYVLVSAVLVGMVPYTELNVAAPVAYAVEKVGAPHWARV
                     LIDVGAVAGLASVVLAMLLGQSRVFYSMSRDGLLGEWAGRVHPKFRTPYLSSIFTGIA
                     VALASGLLPLQLLGQLVNIGTLLAFVLVCAGVLILRKKRPDLDRPFRTPWVPFVPIMG
                     IICCLGLMATLPADTWIRLIVWLLIGF"
     gene            complement(1604..3061)
                     /gene="guaB"
                     /locus_tag="VFD73_19695"
     CDS             complement(1604..3061)
                     /gene="guaB"
                     /locus_tag="VFD73_19695"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HZI76199.1"
                     /translation="MSAIRPKLGLTFDDVLLVPRHSTVHPREVSTVTRLTRTISLNIP
                     LISAAMDTVTEADMAIAMARAGGIGVIHKNMTVERQAAEVDRVKRSESGMIMNPITLG
                     PDRPLREAYALMRRFKISGVPIVDGQGRLVGIITNRDLQFESNLDQPLREVMTKEKLV
                     TAPVGTSLEDAERILARHRIEKLPVVDAQGVLKGLITVKDIFKRREHPDANKDQHGRL
                     RVAAAVGGGPDAIPRARGLVGAGVDVIVVDSAHGHSEGVLATVDQLRDAFPDVQLVAG
                     NVATEAGTRELVRRGVDAVKVGIGPGSICTTRVVTGVGVPQVTAIMDSLRGADDVPII
                     ADGGVKYSGDVVKALAAGASSVMMGSMLAGTEESPGESVLAEGRRFKMIRGMGSLSAM
                     QDGSADRYFQEGEMAPSKMVPEGIEGRVPYKGPVADVIYQMVGGLRSGMGYCGVAAIP
                     QLQCDVEMIQVTAAGLRESHPHDVTITREAPNYSA"
     gene            complement(3216..5171)
                     /locus_tag="VFD73_19700"
     CDS             complement(3216..5171)
                     /locus_tag="VFD73_19700"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI76200.1"
                     /translation="MVLAPTGRDAELLGEVISHAALQTEVSPDINALCRELRSGAAVA
                     VIAEEALTGTAASQLNQLLAEQPSWSDLPIIVLLTSGATLASSRALLSQFSEHGNLTL
                     LERPVRSVALLSTLQAALRARHRQYEVRDYLVASTAAQAALERSESRYRSLTLASASL
                     VWVADPNGAFSVELPLWERYTGQPREAYSGWGWTEAIHPEDREAMLLAWRRALEREES
                     YQDEYRLLRFDKQYRRVAARGVPVLDSAGLLVEWVGTCTDVEDERRAAEHLRQAQRLE
                     AVGSLAGGVAHEVNNMMTAVIGFGGLVLKALPEQHPQRSDVNEMVKAATRAAGVTRQL
                     LAFTRQQMLQLSVLDLNAVVRNVSRMLGSLLGADIELVTHLDPEVGRVRADAGQLEQV
                     IINLALNARHAMQSGGRLRLETSSVMLDRGYLVRHPGIDIKEGSYVALSVSDTGTGMD
                     PTTRSRAFEPFFTTKPVGQGTGLGLSTAYGIIKQSNGYIWLYSEPGHGTTVKVYLPTV
                     TDPADRPVGSVEAPRGRGEAILVVEDEDAVRLLARRSLESAGYEVMEAVDGKDGLDVM
                     LASDSRVALVLCDVILPELSGHEFGRRLGTIRPNVPVLYMSGYPGLEVVERGLIARDA
                     PFIEKPFTPEGLASAVRRLLDRAPSHR"
     gene            complement(5206..>5591)
                     /locus_tag="VFD73_19705"
     CDS             complement(5206..>5591)
                     /locus_tag="VFD73_19705"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HZI76201.1"
                     /translation="DERLLDIRLHELLSYLAQRGVTTVMTLAQHGILASPQGSQAEVS
                     YLADTLLSLRFFEAFGEVRKAISVLKKRSGHHEHTIREFQITDHGVRVGEPLHAFQGV
                     LTGVPDYVGERQPLFAQGGAAARER"
BASE COUNT         1031 a         1888 c         1737 g          935 t
ORIGIN      
        1 cgaagccgat cagcagccat acgatgaggc gaatccaggt atcggcgggc aaggtggcca
       61 tcaatcccag gcagcagata atccccatga tcgggacgaa cggtacccag ggtgtgcgga
      121 acgggcgatc gagatcggga cgcttcttcc tcaggatcag cacgccggcg cagaccagca
      181 cgaatgcgag cagcgtcccg atattcacca gctgccccag cagctgcagc ggcagcaggc
      241 cgctggccag agcgaccgca atgccggtga agatcgacga gagatatggc gtgcggaact
      301 tgggatggac ccgcccggcc cattcgccca gcaagccgtc gcgagacatg gagtagaaga
      361 cccggctctg gcccagcaac atggccagta ccaccgacgc gagtccggcg acggctccca
      421 cgtcgatcag gaccctggcc cagtggggcg cgcccacctt ctcaaccgcg tacgcgacgg
      481 gcgccgcgac gttgagctcg gtatacggca ccattccgac cagcacagcg gagaccagca
      541 cgtagagcgt cgtacagatg accagcgacc ccaggatgcc gatcggcagg tcgcgctggg
      601 gattcttggc ttcctgcgcc gcggtcgaga cggtgtcgaa gccaatgtag gcaaagaaca
      661 ccagcccagc gccgcgcaga atgccggaga tgccgtacgt cccccactcg ccctggttgg
      721 gtgggatgaa cggatgccag ttcgccgggt tcacgtactt gatcccgacg gccacgatca
      781 gcagcacgat cgtgaccttc aggatcacga tgaagttgtt gaccgacgcc gactccttga
      841 tcccgatcac caggatggtg gacatcagag ccacgatgaa caccgccggc acgttaagca
      901 gcgcgccggt gaagttgagg ccgtcgtggc cgcatcctac cacggcgcgg gcgacttcac
      961 ccgcggtaca ccaccgggtt ggtgacatgg tcaggtttgc ggggagggta atgccgaaca
     1021 gcttgaacag gtccaccaga tgtcccgacc agcccacgcc aacggtagcg gcaccggccg
     1081 cgtactccag caccaggtcc cacccgatga tccaggcgat caactcgccc atcgtggcgt
     1141 aggaatacgt gtacgcgctt cctgccaccg gcaccgtgct cgccatctcg gcgtagcaga
     1201 gcccggcaaa ggtgcaggcg atgcccacca ggatcatcga gatcggaacc gccggccccg
     1261 cgtggagcgc cgccgcctgg ccggtgagca caaagatgcc ggccccgatg atcgcgccga
     1321 tccccagcgt cgtgagattg aggggtccga gcttccggtg caggctccgc tcgccggttt
     1381 cctccgcctc ggcccgaagc accgcgatcg attttgtagc ccagagattc atggtggtcc
     1441 ttctggaaaa gcgtgagccg gaaaagaaaa cgtgagcggg aaaagaactg cgtgagcagt
     1501 gatcggcttt gcatgagcgg gtgaacttgc gacgacagct gttgcgggag cggaatcacc
     1561 gcttacgctt ctgtttcccg atcacgcttt ttgttccccg tggtcacgcg ctgtagttcg
     1621 gagcttcccg ggtaatcgtc acatcgtgcg ggtgcgactc gcggagaccg gcggccgtca
     1681 cctgaatcat ctccacgtcg cattgcagct gcggaatggc ggccacaccg cagtagccca
     1741 tcccgctccg gaggccaccc accatctgat agatgacatc ggcgacggga cccttgtacg
     1801 gcacccggcc ttcgatgccc tcgggcacca tcttggaagg cgccatctcc ccttcctgga
     1861 agtaccggtc ggccgatccg tcctgcattg ccgagagact tcccatccct cggatcatct
     1921 tgaagcggcg gccttcggcc agcaccgatt caccggggct ttcctcggtg cccgcgagca
     1981 tcgatcccat catgacggag gacgctcctg cggcgagcgc tttcaccacg tcgccagaat
     2041 acttcactcc gccgtcggcg atgatgggaa catcatcggc accccgaagc gagtccatga
     2101 tcgcggtgac ctgagggaca cccacaccgg tgaccacccg ggtggtgcag atgctgcccg
     2161 gaccgatgcc gaccttcacc gcgtccacgc cgcgccggac cagttcccgg gttcccgctt
     2221 cggtggcaac gtttccggcg accaattgga cgtcagggaa ggcatcgcgc agctgatcga
     2281 cggtggcgag cacgccctca ctgtgcccgt gcgccgaatc gaccacgatc acatccactc
     2341 ccgcgcccac caggccacgg gcccgcggaa tggcatcggg gccgccgccc accgccgcgg
     2401 caacccggag tctcccgtgc tggtctttgt tggcgtcggg gtgctcgcgc cgcttgaaga
     2461 tgtccttgac ggtgatcagc cccttcaaca ctccctgggc atccacgacg gggagcttct
     2521 cgatccggtg ccgggccagg atccgctccg cgtcctccag actggtgccg acgggagccg
     2581 tgaccagctt ctccttggtc atgacctccc gaagcggctg gtcgaggttg ctctcgaatt
     2641 ggagatcgcg gttggtgatg attccgacca ggcggccctg gccgtctacg atgggcactc
     2701 cggagatctt gaaccgacgc atcagcgcgt aggcctcccg gagcggccgg tcgggcccca
     2761 gggtgatcgg gttcatgatc atcccactct cgctccgctt gacccgatcc acctccgccg
     2821 cctggcgctc aaccgtcatg ttcttgtgaa tgacaccgat gccgccggcc cgggccatcg
     2881 cgatggccat gtccgcctcg gtgaccgtgt ccatggcggc ggagatcagc gggatgttga
     2941 gagagatggt gcgggtaagg cgggtgacgg tggagacctc gcgagggtgc acggtcgaat
     3001 ggcgcggcac caggaggacg tcatcgaaag taagcccgag tttgggccga atcgcgctca
     3061 cgggctctcc gccatttggc cggctcccct gtgcacgacg gcccaccggc acccggtacg
     3121 ggctgacggc gggccatggc tcaatcggtc catctcgaac actagcggcc ggttgcagct
     3181 aaagcaagcc gcagcggatc ttcccgacga caccgtcacc tatggctggg cgctcgatcg
     3241 agcagccggc gtacggcgga tgcaagaccc tctggcgtga atggcttctc gatgaagggc
     3301 gcgtctcgcg cgatgagacc tcgctcgacc acctcgagtc cgggatatcc cgacatgtag
     3361 agtaccggga cgttgggacg aatggtgccg agccgccggc cgaactcgtg gccactcagc
     3421 tccggcagaa tgacatcgca aagcaccagc gccaccctgg aatcggaggc cagcatgaca
     3481 tcgagcccgt ccttcccatc aaccgcctcc atcacctcat agccggcgct ctccagcgac
     3541 ctccgcgcca gcaaccgcac tgcgtcctcg tcctccacga ccaggatggc ttcgccccga
     3601 cctcgtggcg cctcgactga cccaaccggc cgatctgccg ggtcggtgac tgtgggcagg
     3661 tacaccttca ccgtggtccc gtggcccggc tcgctataaa gccagatgta gccgttggat
     3721 tgcttgatga taccataggc ggtcgagagg ccgagaccgg tgccctgccc taccggcttg
     3781 gtggtaaaga acggctcgaa ggcgcggctt cgcgtcgttg gatccattcc ggtaccagta
     3841 tcgctgacac tcagggcgac gtaggaacct tctttgatat cgatgccggg gtggcggacc
     3901 aggtaaccgc gatccagcat gacagacgag gtctccagtc gaaggcgacc tcccgactgc
     3961 atggcgtggc gggcattcag ggcgaggttg atgatgacct gctccagctg gccggcatcg
     4021 gcgcgaactc gtccgacttc tggatcgaga tgggtcacca gctcgatgtc ggcaccgagc
     4081 aggctgccca acatacggct cacgttgcga acgacggcat tcagatccag aaccgaaagt
     4141 tgcagcatct gctgccgggt gaaggccagc agttggcgag tgacgccggc cgcgcgggtt
     4201 gcggccttga ccatctcatt cacatccgag cgctgtgggt gctgctccgg aagcgccttg
     4261 aggaccaatc ctccaaatcc gatgaccgcc gtcatcatgt tgttgacctc gtgggctacc
     4321 ccgccggcga gacttcccac tgcctccaga cgctgcgcct gccgcaggtg ctctgcggcg
     4381 cggcgctcgt cttccacgtc ggtgcaggtc cccacccatt ccaccagcag tccagccgag
     4441 tccagtaccg gcacgccacg agccgccacg cgacgatact gtttgtcgaa ccgcaggagc
     4501 cggtactcgt cctggtagct ctcctctctc tcgagcgcgc gccgccaggc gagcagcatc
     4561 gcctcccgat cttccggatg aatcgcctcg gtccatcccc agccggagta cgcctcgcgc
     4621 ggctggccgg tgtaccgctc ccagagcggc agctcgacgc tgaaggcgcc gttcggatca
     4681 gccacccaga ccagcgaagc cgacgccagc gtgagagaac ggtagcgcga ctcgctgcgc
     4741 tccagcgccg cctgggctgc agtgctggcg accaggtaat cgcgaacctc gtactggcgg
     4801 tggcgagcac gaagagcagc ctgcagcgtg ctcaacagtg ccacgctccg taccgggcgc
     4861 tccagcagcg tcaggtttcc gtgctccgag aactgcgaca gcagagcccg gctggacgcg
     4921 agggtggcgc ccgacgtcag gaggacgatg atggggaggt ccgaccagga cggctgctcg
     4981 gccagaagct gattcaactg actggcagcc gtaccggtca gggcctcctc ggcgattacg
     5041 gcaaccgcag ctcccgatct gagctcacga cagagcgcgt tgatgtcagg ggacacctca
     5101 gtctggagag ccgcgtggct gatgacctcg cccagcagct cagcatctcg gccggtagga
     5161 gcgaggacca cgatgcgctc gctggacccc gcagaagtct gaccttcacc tttcacgggc
     5221 ggcggcgccc ccctgggcga acagaggctg cctctcgccg acgtagtcgg gcactccggt
     5281 tagtacacct tggaacgcat gcaacggttc acctacgcgc accccgtggt ccgtgatctg
     5341 gaactcgcgg atggtatgct cgtggtgacc actccgcttc ttcagtaccg agatcgcctt
     5401 ccgcacctcg ccgaacgcct cgaagaaacg gagcgacaga agggtatccg ccagataact
     5461 cacctccgcc tggctgccct gaggcgacgc aagaatcccg tgctgagcca gcgtcatcac
     5521 cgtcgttacc ccgcgttgag cgagatagct cagcagctcg tgcaaccgaa tgtcgagcag
     5581 ccgttcgtcc a
//
LOCUS       DASRPQ010001734         1161 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1136802, whole genome shotgun sequence.
ACCESSION   DASRPQ010001734 DASRPQ010000000
VERSION     DASRPQ010001734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1136802"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            168..>1161
                     /gene="istA"
                     /locus_tag="VFD73_19710"
     CDS             168..>1161
                     /gene="istA"
                     /locus_tag="VFD73_19710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011937012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HZI76202.1"
                     /translation="MVTDNQVRRLKKLSNTEKNQEIAASKAGMDPKTARRYLELNRLP
                     SELKRERHWRTREDPFSDVWDRVRQQIEESPGLEAKTLFEWLQREFPGRFSDGQIRTL
                     QRRIKLWRVTEGPGQEVYFGQKHPPGRLCASDFTHMTELGITLGGQTFEHLVYHFVLT
                     YSNWEAGTICYSESLESLSEGWQNAVWELGAVAAEHRTDSLSSAVNNMSKLEEFNQRY
                     EAVMQYYGVKPQHTNPASPNENGDAEQSHHRFKRAVEQALLLRGSREFGSLTEYAQFL
                     KDLFTQRNAGRRARLAEEMAVMRELPARRMESAKREQVKVDSGSLIHVERNAYSV"
BASE COUNT          276 a          306 c          394 g          185 t
ORIGIN      
        1 cgtccgtccc gctcctcccg ccagatccgg ctcgcatccg cccgcgaacg tagcagaaaa
       61 gccgtatgtc cggcgacaat taagacaccc ggctaacgac aattaaaatt cccgctcgac
      121 gacaacggat gtgaccatca ggaattgcgc tcaacgagcg ccacgggatg gtcacggaca
      181 accaggtcag gaggttgaag aagttgtcga acaccgaaaa gaatcaggaa attgcggctt
      241 cgaaggcggg gatggatccg aaaacggcgc ggaggtatct ggagctgaat cggttgccga
      301 gcgagctgaa acgggagcgg cattggcgta cccgtgagga ccctttcagc gatgtctggg
      361 accgggtccg ccagcagatt gaggagagtc ccggcctcga agccaagacc ttatttgaat
      421 ggctgcagcg ggaattcccc ggcagatttt ccgatgggca gatccggaca ctgcaacggc
      481 ggatcaaact atggcgggtg accgaaggac cagggcagga agtgtatttc ggtcagaaac
      541 acccaccagg acgattatgc gcctcggact tcacccacat gaccgagctg gggatcacgc
      601 tcggggggca gacattcgag cacctggtat atcacttcgt gctgacgtac tcgaactggg
      661 aggcggggac aatctgctac tcggagagcc tggagagcct cagcgaagga tggcagaacg
      721 cggtctggga gttgggagca gtagcggcgg agcaccgtac cgacagcctg tcgagcgcgg
      781 tgaacaacat gagcaagctg gaggagttca accagcggta tgaagctgta atgcagtatt
      841 acggggtcaa gccgcagcac accaatccgg cgagcccgaa cgagaacggc gatgccgagc
      901 agagccatca ccggttcaag cgggcggtgg agcaggcgct actgctgcga gggagccgcg
      961 agtttggaag cctgaccgag tacgcgcagt tcctcaagga cctgttcacg cagcggaatg
     1021 cgggccggcg agctcggttg gccgaggaga tggcggtgat gcgggagttg ccggcgcgac
     1081 ggatggaatc ggccaaacgg gagcaggtga aggtggactc tggcagtctg atccatgtgg
     1141 agcggaatgc gtactcggtg a
//
LOCUS       DASRPQ010001735         1351 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3966903, whole genome shotgun sequence.
ACCESSION   DASRPQ010001735 DASRPQ010000000
VERSION     DASRPQ010001735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1351
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3966903"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            522..1073
                     /locus_tag="VFD73_19715"
     CDS             522..1073
                     /locus_tag="VFD73_19715"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZI76203.1"
                     /translation="MTTSPGPVHETAATTDDAALTFRGVDHVSLTVTDLNVSAKFYTQ
                     VLGFTVVLDFGYGLACIHKTTGFTLSLIRHADGTGTPFTQRQTGLDHLGLTARNRAEL
                     LGWEQRLRELNVEFTPVRDSELGHHLNFRDPDGIALEFYAPNDRFAAALDELRSRKFS
                     DEELLDAAEQQLGLGAYVARRRS"
BASE COUNT          247 a          409 c          461 g          234 t
ORIGIN      
        1 ccttgccgaa cgatcgccgt gcatcctttt tattgttctg gcaggaaatc agatcgctta
       61 atcagagcga gtggcctgcc ggctgatcag gcggggtgtt agcgctagat ccgccaattc
      121 tgggcgtcat cagcctcgcc cggcatccgg ccggagtggc ctcaggcgcg cgcgacgtgc
      181 tagcggcggg gacggcgatc aggtatgcgg ctggttgagc ccgctcggca gtgctcgatg
      241 ggactcgatc tctatgtgct ctccacacca tctgcgacca gcctgcgcag gccggaggtg
      301 acgtcttacc ggaaggcata cgacgggctg gggccggatg cggccgggag atccgggtgc
      361 agctggggcg gcggaaccag cttgagcagc cggcaaccat accgggccgg ctttgacgcc
      421 aattatgagc cggcgtacgg gcactgccga tctccgggct cagcggccgg ggggtcaagg
      481 ccaatgcgcg atagcgaacg ctgcaacgaa aggaatccct catgacgacg tcacccgggc
      541 cggtgcacga aacggcggca acgactgacg acgcggccct gaccttccgt ggagtagacc
      601 atgtcagtct gaccgtcacg gacctgaatg tcagcgccaa gttctacacg caggtgcttg
      661 gcttcaccgt cgtcctcgac ttcgggtacg gcttggcctg catacacaag acaaccggat
      721 tcacgctttc gctgatccgg cacgccgatg gcaccggtac cccgttcacg cagaggcaga
      781 ccggactgga ccatctggga cttaccgcaa ggaacagggc ggaactcttg ggctgggagc
      841 aacggcttcg cgaactgaac gtggagttca ctccggtccg ggacagcgag ctcggccatc
      901 acctgaactt ccgcgacccc gatgggatcg ctctggagtt ctacgcccct aatgaccgct
      961 tcgcggctgc cctggatgaa ctgcggagcc gcaaattctc cgacgaagag ctgctggacg
     1021 ccgcggagca gcagctggga ttgggggcat acgtcgcacg gcgacgctca tgatttccgt
     1081 gcgcgagccg gccggacccg aagctcgact acgtatgtcc ctgacagttg cccggaaggg
     1141 gaggatggca gccgggagcg tgcagctagg gaggtcctgc gcggcacctg ccctgggtgt
     1201 cttggtcaac cgcagcctgg gggcgcgcgt ctacttactg gcatgcctgt cttggcggca
     1261 ctgctgcgcg ggcggatctg gctggcagac ggcaactgtg aggtgactgg gatgagtgcg
     1321 gcgagggaag gacgcacatg agtagacgag c
//
LOCUS       DASRPQ010001736         2548 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3966911, whole genome shotgun sequence.
ACCESSION   DASRPQ010001736 DASRPQ010000000
VERSION     DASRPQ010001736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2548
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3966911"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..1704
                     /locus_tag="VFD73_19720"
     CDS             121..1704
                     /locus_tag="VFD73_19720"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI76204.1"
                     /translation="MADIKLIGLPAQDTPPDLQTGAGHRRQIPADLLRQASRRLETLA
                     LVGAALWILGPAFGHLALALTEPDNPRWAQFGATETIATAGFVISLLVFAFSRSRERN
                     PKLVMDIGLAYMVACAACIGAMIHWDLATGAPRGTDPMITWTPVVILIFAALLPAPPW
                     KMAVAGFIAASMDPLGMITAQAAGEYHFGPLRNAFLMHYPNYLLLGVAVVISHVVTRL
                     GRQVAKEREMGSYRLGELLGRGGMGEVYRATHRMLARPAAIKLIHPDMLQAQDPKSAG
                     LAVTRFRREAEAAAQLRSPHTVELYDFGETEDGTLYFVMELLQGMDLETLVRREGPLP
                     QERVIHILRQVCESLEEAHASGLVHRDIKPANIHVGRVGLRHDFVKVLDFGLVKSVMP
                     AAGEDSMATAAGLTPGTPAYMAPELALGEPVDGRADLYALGCVAHYLLTGQLVFEAAS
                     GFQMIAKHIQEAPIPPSQRTELPVAPELDRVILTCLAKRPENRPQSAAELDRMLAEID
                     VAPWGEAEATRWWQMHQPA"
     gene            1726..2151
                     /locus_tag="VFD73_19725"
     CDS             1726..2151
                     /locus_tag="VFD73_19725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76205.1"
                     /translation="MRTAHLVFAVASTFAFGCVEGGNLAVSGGAPVAAAVQGRISRCA
                     QPVVGADVLLLVQQDRPEQSRPVDARFGPVNTSREGRYLVEVSPAFAVPGAATFQLRV
                     NGDGRTQDIPGGTLDLQLGVPARDTTRFDVDLGVELGQC"
     gene            2145..>2548
                     /locus_tag="VFD73_19730"
     CDS             2145..>2548
                     /locus_tag="VFD73_19730"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZI76206.1"
                     /translation="MLRSMLPVMLVVLAANTASAQESSDSAGAVRSIRKALADWVAAA
                     NRGDWKTAAQVWAPDLIGWYPGQPDDTYEREMARLGKPKPGAARTHYGVNVVEVLVSG
                     RLAVVRDIWRFATPAGSSDSTVTIVRGYEVWRR"
BASE COUNT          440 a          807 c          836 g          465 t
ORIGIN      
        1 tcggctccag aaggtgaacg atccgtggcg cgatttctgg cgcagcggtg tttccctggc
       61 tggagctcgg cgcaggctaa agcgtcgcac tagctttcct tcggtgccct gatccgttcc
      121 atggcagata tcaagctcat cgggcttccg gcccaagaca ctccccccga cctccagacc
      181 ggcgcgggtc atcgccggca gatcccggcg gatctgctgc ggcaggcgtc ccgcaggctg
      241 gagacgctcg cgctggtcgg cgcggcgctc tggatcctcg gtcctgcttt cgggcacctg
      301 gcactcgccc tgaccgagcc ggacaatccg cgctgggccc agttcggcgc caccgagacc
      361 atcgcaaccg caggatttgt gatctcgctc ctggtctttg ccttcagccg gagccgagaa
      421 cgcaacccga aattggtgat ggacatcggg ctcgcctaca tggtggcatg cgcggcgtgc
      481 atcggggcga tgatccattg ggacttagcg acaggagcgc cgcggggcac cgatcccatg
      541 atcacatgga cacccgttgt gatcctgatc tttgcagcac tgctgccggc cccgccctgg
      601 aaaatggcgg ttgcgggctt cattgcggca tcgatggatc cgttgggaat gatcaccgcc
      661 caggcagcag gagagtacca ctttggcccg cttcgcaacg ccttcctaat gcactatccc
      721 aactacctcc tgctcggcgt agccgtggtg atctcccacg tcgtcacccg cctcggaagg
      781 caagttgcca aggaacggga gatggggagt tatcgactgg gcgagcttct gggacgcggt
      841 ggcatgggcg aggtataccg agccacccat cggatgctgg cgcggccggc cgccatcaaa
      901 ctcattcacc ctgatatgct ccaggcccag gatcccaaga gcgcaggtct cgcggtcacg
      961 cgcttccggc gcgaagccga agccgcagcc caactccggt caccgcatac cgtagagctc
     1021 tacgatttcg gcgagaccga ggacggaacg ctgtacttcg tcatggagct gcttcaagga
     1081 atggacctgg agacgctggt ccggcgggag ggcccactgc cgcaggaacg ggtcatccac
     1141 atcctgagac aagtctgcga atcgctcgag gaggcgcatg cctcaggcct ggtgcatcgc
     1201 gatatcaaac ccgccaacat ccacgtcggc cgggtcggtc tgaggcatga cttcgtgaaa
     1261 gtgctggact ttggcctggt gaagtcggtg atgcccgctg ccggcgagga ttccatggcg
     1321 actgctgctg gactcacccc agggacgccg gcgtacatgg cgcccgagct cgcgctgggt
     1381 gagccggtcg atggccgcgc cgacctgtac gccctgggct gcgtcgccca ctacctcctg
     1441 accgggcaac tcgtcttcga ggccgccagc ggttttcaga tgatcgcgaa gcacattcag
     1501 gaggcgccaa ttccgccgtc ccagcgaacc gagctcccgg tagcaccgga gctggaccgc
     1561 gtcatcctca cctgtctggc caagcgtcca gagaatcggc cccaaagcgc tgccgagctg
     1621 gaccgaatgc tggctgagat cgatgttgct ccgtggggag aggcggaagc gacgcgctgg
     1681 tggcaaatgc atcagcctgc ctgacctctt gtggaagcac tcggcatgag aaccgctcac
     1741 ctcgtcttcg ccgtggcaag cacattcgca ttcggctgcg ttgaaggcgg caatctggcg
     1801 gtttcgggcg gtgcgccggt ggctgccgcg gttcaaggca ggatcagccg atgcgctcag
     1861 ccggtggtgg gagccgacgt gctgctgctg gtacagcaag accggccgga gcagagccgg
     1921 ccggtggatg ctcggttcgg gccagtcaat actagccgcg agggaaggta cttggtcgag
     1981 gtcagccctg cgtttgcggt gcccggtgcc gccaccttcc agctcagagt caacggggac
     2041 ggccggactc aggatattcc cggtggtaca ctggacctgc agctgggagt cccggcccgg
     2101 gacactaccc gcttcgatgt cgatctaggc gtggagctgg gtcagtgctg agatccatgc
     2161 ttcctgtcat gctggtggtg ttagcggcga acactgcctc ggcgcaggag tcgtccgatt
     2221 cagcgggtgc agttcgctcc atccgaaaag cgctggccga ctgggtcgct gccgcaaacc
     2281 gcggtgactg gaagaccgcg gcgcaggtgt gggcacccga tctgatcggc tggtatccgg
     2341 gccagccgga cgacacctac gagcgcgaga tggcccgcct tggcaagccc aaacctggcg
     2401 ctgctcgaac ccactacggg gtaaacgtcg ttgaggtgct ggtctcagga cgattggcag
     2461 tggttcggga catctggcga ttcgccacgc cggcaggttc ttcggattcg accgtaacga
     2521 tcgttcgcgg ctacgaggtc tggcggcg
//
LOCUS       DASRPQ010001737         1533 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_512812, whole genome shotgun sequence.
ACCESSION   DASRPQ010001737 DASRPQ010000000
VERSION     DASRPQ010001737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512812"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(7..996)
                     /locus_tag="VFD73_19735"
     CDS             complement(7..996)
                     /locus_tag="VFD73_19735"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI76207.1"
                     /translation="MSTPGALIEPTTTPASTTSLADLGFISVIVPVVERTDDLVAVYH
                     SFAQALDGVGAEYEFLFVFDGRFTPPAELIELSRDTGRLKLLGFAREFGETAALRLGI
                     ERSRGDLVFTLPAYFQVQPEGIPLLLQAMQSGADMAVANRSPRLDSWLNRAQSRIFHS
                     IVGGVSDQRFHDMACGVRVMRRTVAETIPLYGDLHRFIPALALREGFRVEEVPVAQHP
                     SDAKMRVYRPGVYFRRLLDIGAFFFLAKFTEKPLRFFGLVGSLFFGAGAVMSLVLLVE
                     RVEGQGIANRPALLLAVLLVALGVQLIGLGLVGEIIVHLRAPHRRAYRVRERT"
     gene            complement(998..>1533)
                     /locus_tag="VFD73_19740"
     CDS             complement(998..>1533)
                     /locus_tag="VFD73_19740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76208.1"
                     /translation="WVANRLIRRLTGVPITDNGCSLKAYRRDLLNRIPLYAEQHRFIP
                     ALSASVGARIAEMPVRHHARRFGESKYGISRTLKVLVDLLTLKMITTFRSRPLVGFAL
                     AAVPALGIALLFGIFWLVSWTWFEPEKASALVFPGAGLLALGVAIYLFMLGLVAEVAL
                     SSERVGSHDIPTAAEIF"
BASE COUNT          329 a          495 c          472 g          237 t
ORIGIN      
        1 aggcgctcag gtccgttcgc gcacccggta cgcccgccga tggggcgcgc ggaggtgcac
       61 gataatctcc ccgaccaatc cgagcccaat cagttgcacg ccgagcgcaa ccaggagcac
      121 cgcaagcagc agtgcgggac ggtttgcgat gccctgtcct tccacccgct ccaccagaag
      181 caccaggctc atgactgcgc cggcgccaaa gaacagagag ccgaccagtc caaagaacct
      241 gagaggcttc tcggtgaact tcgccaggaa gaagaaggct ccgatatcca gcaagcgccg
      301 gaagtagacc ccaggccggt acacccgcat cttcgcatcg ctcggatgct gggccacggg
      361 cacttcctcg acccgaaacc cttctcgcag cgcaagggcg gggatgaatc gatgcaggtc
      421 tccgtagagc gggatggtct ccgcgaccgt tcggcgcatc acccgtacgc cgcacgccat
      481 gtcgtggaac ctctgatccg ataccccgcc cacgatactg tgaaagattc gcgactgagc
      541 ccggttgagc cagctatcca gcctcggcga ccggttggcc acggccatgt cagcgcccga
      601 ctgcatcgcc tggagcagaa ggggaatccc ttcgggctgt acctggaagt acgccggaag
      661 cgtgaaaacg aggtctcccc ggctacgttc gattccgagc ctaagtgccg ccgtttcccc
      721 gaattcacga gcaaacccga gcagctttag ccgcccggta tcccggctca actcgatcag
      781 ttcggctggc ggcgtgaagc gtccgtcgaa gacgaagagg aactcgtact ctgcgccgac
      841 gccatccagc gcttgggcaa aggaatggta tacggcgacc aagtcatcgg tacgctcgac
      901 gacagggacg atcaccgaga tgaatccgag atcggccaag ctcgtggtcg acgccggcgt
      961 ggtggtgggc tcgatcaaag ctcctggtgt actcatatca gaaaatctcc gccgcggtgg
     1021 gtatgtcgtg gctgcccacc cgttcgctgc tgagggccac ctcagcgacg aggccgagca
     1081 tgaaaaggta gatggcgaca cccagcgcga gcagaccagc ccccgggaac accaacgcgg
     1141 aggccttctc cggctcaaac caggtccaac tgaccagcca gaaaatcccg aacaggagtg
     1201 cgatcccgag tgcgggaacc gccgccaggg cgaaccccac caaaggtctg gagcgaaagg
     1261 tggtgatcat cttgagcgtg agcaggtcga cgagaacttt gagggtgcgc gaaatgccgt
     1321 acttgctctc gccgaagcgc cgcgcatgat ggcgcacggg catttccgcg attcgcgcgc
     1381 cgacgctggc cgagagtgcc gggatgaacc ggtgctgttc ggcatacagc ggaatgcggt
     1441 tcaacagatc gcgccgatag gccttcagcg aacacccatt gtcggtaatc ggcacaccgg
     1501 tgagccggcg gatcagccgg ttggccaccc agg
//
LOCUS       DASRPQ010001738         1297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2390775, whole genome shotgun sequence.
ACCESSION   DASRPQ010001738 DASRPQ010000000
VERSION     DASRPQ010001738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2390775"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..193)
                     /locus_tag="VFD73_19745"
     CDS             complement(<1..193)
                     /locus_tag="VFD73_19745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HZI76209.1"
                     /translation="MSAPSLGKDLVGLEPLSAEQIQLILDTAEPFKEVSERAIKKVPA
                     LRGKTIVNLFFEASTRTRIS"
     gene            complement(210..746)
                     /gene="pyrR"
                     /locus_tag="VFD73_19750"
     CDS             complement(210..746)
                     /gene="pyrR"
                     /locus_tag="VFD73_19750"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HZI76210.1"
                     /translation="MPSRTPLLDERALGRTLARMASEIVERSRGTETLVLVGIQRRGV
                     ELAGRLKRLIDASEGSNLPVGKLDITLYRDDLQTIGPRPVVGETSLPNLDGRTVVIVD
                     DVLYTGRTVRAALDECADFGRPKRILLCVLIDRGGRELPIQADVVGTTISTAPGDRVD
                     VFVSELDGRDAVEVVRGK"
     gene            complement(989..>1297)
                     /locus_tag="VFD73_19755"
     CDS             complement(989..>1297)
                     /locus_tag="VFD73_19755"
                     /inference="COORDINATES: protein motif:HMM:NF013918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric reductase-like transmembrane
                     domain-containing protein"
                     /protein_id="HZI76211.1"
                     /translation="HPWVLVGFTGFLCLLPLAITSTNGWIRRLGGKNWNRLHRLVYVA
                     AIAGVLHYLWLVKKDIHYPLVYGAVLTVLLLTRVWYAAARPRTRRVPVPRKAAPKPAA
                     "
BASE COUNT          243 a          422 c          414 g          218 t
ORIGIN      
        1 aggaaattcg ggttcgcgtg gaggcctcga agaacaggtt gacgatcgtc ttccctcgga
       61 gcgccggcac cttttttatg gcgcgctcgc tcacttcctt gaacggctcc gccgtatcca
      121 ggatcaactg gatctgctcc gcgctgagcg gctccaggcc gaccaggtcc ttgcccagac
      181 tcggcgcgct cattgaccgg ctcccgctgt cactttcccc tcacgacttc aacggcatca
      241 cgtccatcca gctcgctgac gaagacatcc actcgatctc ccggtgcagt actgatggtc
      301 gtgccgacca cgtccgcctg aatcggcagc tcccggccgc cccggtcgat gagcacacag
      361 agcagaatcc gtttgggcct gccgaaatca gcacactcat ccagcgcggc gcgaacggta
      421 cgaccggtat acagcacgtc gtccacgatg accactgttc ggccgtccag gttgggcagg
      481 ctggtctctc ctacgaccgg tctgggcccg atggtctgga gatcgtcgcg atacaaagtg
      541 atgtcgagtt tgccgacggg aaggttggac ccttcggagg cgtcgatgag gcgcttcagc
      601 cggccggcca gctccacgcc acgccgttga atccccacca ggaccagcgt ctcggtgccc
      661 cggcttcgct caacgatctc actggccatg cgcgcgaggg tccgacctag ggcgcgctcg
      721 tccagaagag gcgtgcggga gggcatcggg gcgggaagct agtgggaagg gggaggaggc
      781 ggaagaggcg gacagggcgg aagtgctcga tgtgtcatgg ggacagctga cgatacgaga
      841 tcgtcgcaca ggtgggaggg gaaatgccct gcagcgcacg tcagcaaccg ccagcaccga
      901 taggatgcca ttgcgcgaga gcgtagcggt tgcgtggtgc gcgaaagggc gttccccgcc
      961 acccgtcaca ctcccaacct cttcgagctt atgccgcggg tttgggggcg gctttcctcg
     1021 gaaccggtac ccggcgcgtc cgaggtcggg ccgccgcgta ccagacgcga gtgagcagca
     1081 gtaccgtgag cacggcaccg tacaccagcg ggtagtgaat gtctttcttc accagccaca
     1141 gatagtgaag cacgcccgcg atcgccgcga cgtacaccag ccggtgcagc cgattccagt
     1201 tcttcccgcc cagccgccgg atccagccgt tcgtcgaggt gatcgccaga ggcagcagac
     1261 aaagaaagcc ggtgaacccg accagcaccc acgggtg
//
LOCUS       DASRPQ010001739         1248 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1476289, whole genome shotgun sequence.
ACCESSION   DASRPQ010001739 DASRPQ010000000
VERSION     DASRPQ010001739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1248
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1476289"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..420
                     /locus_tag="VFD73_19760"
     CDS             <1..420
                     /locus_tag="VFD73_19760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76212.1"
                     /translation="GPCTEPTGLAIDQTHHRLFSGCHSKVMAISDAVAGKLIATVPIG
                     EGVDGAAFDPATGLAFSSNGEGTITVVHEDNPNHFRQVATVTTRKGARTMALDPRTHR
                     IFTVTADLGTPPAPTEQDPHPRPPVIPGTFALLIVDR"
     gene            433..>1248
                     /locus_tag="VFD73_19765"
     CDS             433..>1248
                     /locus_tag="VFD73_19765"
                     /inference="COORDINATES: protein motif:HMM:NF024912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76213.1"
                     /translation="MSRIGRFPHSIIMCGIVGAIASSPIDAGVLDRMRDSLAHRGPDH
                     SASWMSCDGKVALGHRRLAIIDLLPEANQPFVSSDGRFLLVYNGELYNYRELKTEMEA
                     LGVRFRTRSDSEVLLEAYRLWGERALLRFSGMFAFAIWDLSERTLFCARDRAGEKPFY
                     YAEVAGAFLFASEPKAFLCWPGFPRRIHYPALLDYLAYGFVPDPKCIWESCAKLAPGH
                     CMMVRTSNNGSPQVVPPHPWWDWSFNPDSSERDWTGRVLSTLTGAAREMAIADV"
BASE COUNT          203 a          406 c          384 g          255 t
ORIGIN      
        1 gggccgtgca ctgagccaac tggcctggcg atcgaccaaa cccatcaccg gctgttcagc
       61 ggctgtcaca gcaaagtgat ggcaatttcg gacgcagttg cgggaaagct tatcgcgacg
      121 gttcccatcg gtgagggcgt cgacggtgcc gccttcgacc cggcgaccgg tctggcgttt
      181 tccagcaacg gtgaggggac gatcacggtg gttcacgagg acaacccgaa ccactttcgc
      241 caggtcgcga cggttaccac ccggaaggga gctcgcacca tggctctcga tccccgcacc
      301 catcgcatct tcaccgtaac ggcggatctc ggaacgccgc ctgcaccgac cgagcaggat
      361 ccccatccca ggccaccggt cattcccggc acctttgcct tgctcattgt ggatcgctga
      421 ccgtgctccg ccgtgtcacg aattggccgc ttcccgcatt ccatcatcat gtgcgggatc
      481 gtgggcgcga ttgcttccag tccgatcgat gctggtgtcc tcgatcggat gcgggacagt
      541 ttggcgcacc gcgggccgga tcactcggca tcgtggatgt cctgcgatgg gaaggtggcg
      601 ctgggccacc gccggctggc catcatcgat cttcttcccg aggctaatca accctttgtc
      661 tcgtctgatg gccgctttct gctggtgtac aacggcgagc tctacaacta ccgcgagctg
      721 aaaactgaga tggaggcact cggcgtccgg ttccggacca ggagtgactc cgaggtactg
      781 ctcgaggcct atcgtctctg gggcgagcgc gcgctcctcc gcttctccgg catgttcgca
      841 tttgcgatct gggatctatc cgagcggacg ttgttctgcg cgcgggatcg agcgggcgag
      901 aagccgtttt actacgccga ggttgccggc gccttcctct tcgcatcgga gcccaaggcc
      961 ttcctctgtt ggcccggctt tccccgccgg atccactacc ctgcgctgct ggattatctc
     1021 gcctacggct ttgtgcccga ccccaagtgc atctgggaga gttgtgccaa gctggcgccg
     1081 gggcattgca tgatggtacg caccagcaat aacggcagtc cccaggtcgt gccgccccat
     1141 ccctggtggg attggagctt caaccccgac tccagcgagc gagactggac cgggcgagtg
     1201 ctgagtacgc tgaccggtgc ggcccgggag atggccattg ccgacgtt
//
LOCUS       DASRPQ010001740         1077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2390826, whole genome shotgun sequence.
ACCESSION   DASRPQ010001740 DASRPQ010000000
VERSION     DASRPQ010001740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2390826"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..811
                     /locus_tag="VFD73_19770"
     CDS             <1..811
                     /locus_tag="VFD73_19770"
                     /inference="COORDINATES: protein motif:HMM:NF016830.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HZI76214.1"
                     /translation="SSFGIGPEFGQSGVAGPSIFPNTAVGARVEFDPSPFVGLRAAVL
                     DGAPVDRPGGATRLFASGDGALLVGEAVVVRHPDTTGEPRQRRFHIGRSGPRPYAAKL
                     ALGGWYYTARFPDLTATLPNGDPILHRGSGGVYVIADQTVLPARSNHTGPLSAFAQLG
                     VGDGRVNQIAGYLGGGLTLSAPLGAERPEDQLGLGLAAALNGSHYRDAQAAAGIPAGA
                     EIVIEGTYMAQLMTWLAAQTDIQYVIHPGGLKEAPNALVLGLRLAMTTETK"
     gene            858..>1077
                     /locus_tag="VFD73_19775"
     CDS             858..>1077
                     /locus_tag="VFD73_19775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76215.1"
                     /translation="MIRGHADALSIVLLASMISGGWRASNHASPAGDFTALPVDPGSM
                     AFVDTIDDRYQSYNIEMLEVTGGKFWKPY"
BASE COUNT          194 a          345 c          350 g          188 t
ORIGIN      
        1 cagctcattc ggaatcgggc ccgagttcgg acagagcggc gtggccgggc cctccatctt
       61 ccccaacacc gccgtgggag cccgggtcga gttcgacccc tcaccttttg tgggcttgcg
      121 ggcggccgtg ctcgatggcg cgccagtcga ccgtccggga ggcgccacgc ggcttttcgc
      181 ctcgggcgac ggcgccctgc tggtgggcga ggccgtcgtc gtgcggcatc ctgacactac
      241 cggcgagccg aggcagcgcc gattccatat cgggcgaagc ggaccccgcc cctacgctgc
      301 gaagctcgcc ctcggcggct ggtactacac cgccagattt cctgacctca cagccacact
      361 ccccaatggc gatccgattc tccaccgcgg cagcggaggc gtctatgtga tcgcggatca
      421 gacggtgctg cccgcgagat cgaaccacac cggaccgctc agcgcctttg cgcagctcgg
      481 agtcggtgac gggcgggtca accagattgc gggctatctg ggaggcggac tgacactcag
      541 cgcaccgctc ggggccgagc gtccggagga ccagcttggg ttggggctgg ccgccgcact
      601 gaacggctcc cattatcggg acgcgcaggc agcagcgggc attcccgcgg gtgccgaaat
      661 cgtcatcgaa ggcacctata tggcgcagct aatgacctgg ctcgcagcac aaactgacat
      721 tcagtacgtg atccatccag gaggactgaa ggaagcgccc aacgcgctgg ttcttgggct
      781 gcggcttgcg atgaccacgg aaaccaaatg agggtcgcgg agcttcgctt ccgagtcgac
      841 ctgcaaggac tagttctatg atcaggggac atgcagacgc gctgagcatc gtgttgcttg
      901 cctcgatgat ctctggtgga tggcgggcaa gcaaccacgc gtcccccgct ggggacttca
      961 ctgcgctccc ggtggaccca ggcagcatgg cctttgtgga taccatcgat gatcgctacc
     1021 agtcgtacaa tatcgaaatg ctggaggtaa ccggagggaa gttctggaag ccttaca
//
LOCUS       DASRPQ010001741         1169 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_512978, whole genome shotgun sequence.
ACCESSION   DASRPQ010001741 DASRPQ010000000
VERSION     DASRPQ010001741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1169
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512978"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..389
                     /locus_tag="VFD73_19780"
     CDS             <1..389
                     /locus_tag="VFD73_19780"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HZI76216.1"
                     /translation="FDVSHGELVCTARDYHRFARMLADGGRVSGQAVISPDHLRQMTS
                     DQVPAACKTADSFFPRFWDGMGWGFGVAVKTEGPQRGRIGWSGGLGTDFFADPDGAVG
                     ILLTQVELGEDMWPLIEQFQSLHEPS"
BASE COUNT          226 a          347 c          387 g          209 t
ORIGIN      
        1 cgttcgacgt cagccatggc gagctggtct gtaccgcacg ggactatcac cgcttcgccc
       61 ggatgcttgc ggacggaggg cgggtcagcg gccaggcggt gatctcaccc gatcacctgc
      121 ggcagatgac cagcgaccag gtgccggcgg cgtgcaagac cgcggacagc ttcttcccga
      181 ggttctggga cgggatggga tggggtttcg gcgtggcggt gaagacagag ggaccccagc
      241 gcggccgcat cggctggtcc ggcgggctgg ggaccgactt cttcgccgac ccggacggcg
      301 cggtcggcat cctgctcacg caagtggagc tgggtgagga catgtggccg ctgatcgaac
      361 agttccagtc gctgcacgag ccgtcgtgac ccgccgaccg taacccctgc ttgcacgctg
      421 ccggaaaagg acgcgcagga atgatccacc tgcgcgtcca ttcccggatc gctgattctc
      481 agagcggccg cgcgtaacgg ctgggatgcg cgccgccaac atggaacgac tgtcacgctg
      541 ggtgaaatag ccagacgtgg gaggaaagac ggatcgtcga atcggcgctc cagaggatcg
      601 accgttcgtg gtgtcgagac ctcacgcaga tcgcccagtt cggcaggccg tggtgcccgc
      661 agaactcttc ggacggcaca accattcatg tctgaggcct gcgtagggga acggtctgca
      721 acgccgtcgg cttctcaggc aaaggatatt cggagactcc agacatgact actgccgaat
      781 gcccgggccg gctgctggcg tctgaatggt gcgaggtgat gacctgcgcc aggcaggcgg
      841 cccagggcca ccagcatggc ggcgtggccg cgtttatatg agttgtatcg cgacggccgc
      901 cgcccccttc aatggacatt gagcgatgtg agctgtaatg ttgcaaacgt cggcgcagag
      961 aggttgtcta tcagagacag aagggacccc atcatgccag ctgattttgt cctgggccgc
     1021 tggactatcc ccccgggaaa tcacgtattg tcgttctcat tctcctggtc gccggggcag
     1081 catccaaaca aaggaccggt attctgtatg ctgtcgccag accatccgaa agttgcagaa
     1141 gacgtcaaga tgacgatcga cgaatactc
//
LOCUS       DASRPQ010001742         1423 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3019319, whole genome shotgun sequence.
ACCESSION   DASRPQ010001742 DASRPQ010000000
VERSION     DASRPQ010001742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1423
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3019319"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..578
                     /locus_tag="VFD73_19785"
     CDS             <1..578
                     /locus_tag="VFD73_19785"
                     /inference="COORDINATES: protein motif:HMM:NF015316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HZI76217.1"
                     /translation="AGPQLPAVSTNATGSLTLPDELTLSARQIVGPRLAIMGTVEWQN
                     WSRLQNVTAAGSGCGVGGVCEVVNLNYRDGWLYSVGAEYAYSPTLLLRAGVGYETSPI
                     QDSTRDILIPDSNRIFLSAGASYKYSEQISVDFGYSHLFFQDAPFCIADPSRNGGTSH
                     CTAGTPAGAVLLRGSSDNSADLVAVGLRYRF"
     gene            867..1046
                     /locus_tag="VFD73_19790"
     CDS             867..1046
                     /locus_tag="VFD73_19790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76218.1"
                     /translation="MPSLLRLLAVVCLVSFAFIGLMVRSGLPLDLGASELFFRIAALL
                     GLLLWLTGRDLNGPN"
BASE COUNT          246 a          446 c          444 g          287 t
ORIGIN      
        1 ccgccggccc tcaactcccc gcggtctcta ccaacgccac cggcagcctc acgcttcccg
       61 atgagctgac tttgagcgct cgccagatcg ttgggccgcg actggccatc atgggtaccg
      121 tggaatggca gaattggagc cgactgcaaa atgtaacggc tgccgggtcg ggctgcggtg
      181 tgggtggggt ctgcgaagtg gtcaacctca actaccgcga tggctggctt tattctgtcg
      241 gggccgaata cgcctacagt ccaaccctgc tattgcgggc aggcgtggga tacgagactt
      301 caccgattca agacagtacc cgagatatcc tgatccccga tagcaatcgc atctttctca
      361 gcgccggggc ctcgtacaaa tactccgagc aaatcagcgt tgatttcggc tactcccacc
      421 tgttcttcca ggatgctcca ttttgcatcg ccgatccctc ccgcaacggc ggcacctccc
      481 attgtactgc ggggacacct gccggtgccg ttttgctgcg cggcagctcc gataactccg
      541 ccgatctcgt cgcggttggc ctgagataca gattctaaga aggctcgacc ggcacggctg
      601 caagccctga tggcattggc ggtcggcgcg acccacccgg atcgcgtcgg cgccgatcga
      661 aagacgcgca aaagggtggg cgtaaacctg gggtcggcgc tcgcgaccga accaaagcct
      721 ccccgttcca ggggatgccc aggcagtgga tttctgtttt ttcacgacac cgatgcccgg
      781 gtgttgagac accctgtttc ggctgctccg gggggctctc cccggtgctc cctcgccgtc
      841 acaacagcac aatttcaagc tcacacatgc cctcgctgct gcgcctgttg gcggtcgtat
      901 gtctcgtgtc ctttgccttt atcggtttga tggtgcgatc aggattgccg cttgatttgg
      961 gtgcctcgga gttgtttttc cggattgccg cccttctggg gctgctgctc tggttgaccg
     1021 ggcgcgattt gaacggacca aattaacaaa cccctgcgaa ccggcagccg attggtggga
     1081 gaagccgagt gtgcggcgag cgcgacccga cggtgtcggc gggcggccga tctcagccgt
     1141 cgagcacgcg agcgattttg atcaccaccc ctgcaagagc gaaattgacc ggggtttggg
     1201 gcaagcggcc ggtcgccgat ttgtcgtggt ttgttggcct ggcctcgcgc gctctagctg
     1261 aggaggaagc cgcgcctccc aggaggtagg tgcggcaaca cgtgctgggg caccggtttg
     1321 cgaggcgcta gcaggctaaa aactgccgga gcgcaaaaag caaggccggg ccgcccgggc
     1381 gcactggctc cgggcggccc tccgccgaac tcaacagcgc ggg
//
LOCUS       DASRPQ010001743         1593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3967742, whole genome shotgun sequence.
ACCESSION   DASRPQ010001743 DASRPQ010000000
VERSION     DASRPQ010001743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3967742"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..389
                     /locus_tag="VFD73_19795"
     CDS             <1..389
                     /locus_tag="VFD73_19795"
                     /inference="COORDINATES: protein motif:HMM:NF017984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="crosslink repair DNA glycosylase YcaQ family
                     protein"
                     /protein_id="HZI76219.1"
                     /translation="WWSGLGTPLARRGLEMTQARPEEVDGLTYWTIGRQPKIARPGRT
                     GVHLLPIYDEYLVAYRDQSAVPRPAYLLGGFQNSLVIDGQVAGTWRTLRGHQGVTAKV
                     SPNRRLTPGERRGLAQAVARCQSFYN"
     gene            complement(437..823)
                     /locus_tag="VFD73_19800"
     CDS             complement(437..823)
                     /locus_tag="VFD73_19800"
                     /inference="COORDINATES: protein motif:HMM:NF024759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HZI76220.1"
                     /translation="MALIEHPTNSVSRKVIGAAIEVHRHLGPGLLESSYHACLCHELD
                     LRGIVYRSQVALPLEYKGVRLPQSYLLDLLVNDSVIVEIKAVHKLLPLHSSQLMTYMR
                     LRRVTSGILLNFNVSVLWEGIRRLLL"
     gene            1022..1564
                     /locus_tag="VFD73_19805"
     CDS             1022..1564
                     /locus_tag="VFD73_19805"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI76221.1"
                     /translation="MNSTQPDGSGRVTVPVEVWLRGPVPGVQPLLQPAAHTLLQVGED
                     VIPIVEHLTPAELWARPGGAAAIGFHLAHLPGSLERLLTYSRSEALTPEQLARLAAER
                     TVHDDRPELGQLVERFRAGLDKAIDYLRTVPEDALLTPREVGRKRLPSTTLGLIIHAA
                     EHSARHAGQIVTLTKVVTAR"
BASE COUNT          301 a          470 c          489 g          333 t
ORIGIN      
        1 tctggtggtc ggggctcggc acccccctgg cgcgacgcgg cctggagatg actcaggcga
       61 ggccggagga ggtggatggg ttgacctatt ggacgatcgg gcggcagcca aagattgcca
      121 gacctgggag gaccggcgtt catctgcttc cgatttatga cgagtacctc gttgcctatc
      181 gcgatcagag cgcggtgccc cgtccagcat acctgctggg cgggtttcag aactcgctgg
      241 tcatcgatgg gcaggtggcc ggcacttggc ggacgctgag aggacaccaa ggagtgaccg
      301 cgaaagtttc tcccaaccgg cgactcactc ctggcgaacg gcgtggcctg gcacaggcgg
      361 tggcacgctg ccagagtttc tacaactagt gtaccacgga gacacggagg caacggagac
      421 ggcacggagc cgagattcag agtaacagtc ttcttatgcc ttcccaaaga actgagacgt
      481 tgaagttcag gaggatgcca gaggtgactc gacgaaggcg catgtaggtc atcagttgag
      541 aggagtggag tggtaagagc ttgtgcaccg ctttgatttc gacgattacg gagtcattta
      601 caaggaggtc caggagatag ctttggggaa gtcgtactcc cttgtactcc agcggcaacg
      661 cgacctggct tcgatagaca attcctctca ggtccagctc atgacatagg caagcgtgat
      721 agctggattc cagcagacca ggccctagat gtcgatgcac ctcgatggcc gctccaatga
      781 ccttgcggct tactgaattg gtgggatgct cgatcaaggc cataaaggct cctgaggtga
      841 gccaacatcg gagggggcgg cctcaggcgt acgatcattt tgcttctact acagctattt
      901 cgatccgtgc cggctccgtg ttctccgtgg ctccgttgtt cagttttcct ttccatgctc
      961 cctcgagcct cgagcatcct tccgtgtttc cgtggtttcg ctgtttggga tacctttaag
     1021 aatgaattcc acacaacctg atggaagcgg ccgggtgacg gttccggtcg aagtctggct
     1081 tcgtggcccg gttcccggcg tccagccgct gctccagccc gctgcccata cactgttgca
     1141 ggtcggcgaa gacgtcatcc ccatcgtgga gcatctcacg ccggcggagc tgtgggctcg
     1201 gcccggtggt gccgcggcga tcggttttca cttggcccat ttgccgggga gcttggagcg
     1261 gctcttgacc tattcgcgga gcgaggccct cacacccgag cagttggccc ggctcgcggc
     1321 tgagcgcacc gttcacgacg accgtcccga gctgggccaa ctggtggaga ggtttcgtgc
     1381 gggcctcgac aaagcaatcg attatctccg taccgttccg gaagacgcgc tcctcactcc
     1441 gcgagaggtc ggccggaaac ggcttccctc taccaccctc gggctgatca tccatgccgc
     1501 cgagcactcg gcccggcacg ccggccaaat cgtaacgctc acaaaagttg tgacggcccg
     1561 ctaggactat ctcttgcacg aacccgtcac cct
//
LOCUS       DASRPQ010001744         1023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2746985, whole genome shotgun sequence.
ACCESSION   DASRPQ010001744 DASRPQ010000000
VERSION     DASRPQ010001744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2746985"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="VFD73_19810"
     CDS             complement(<1..368)
                     /locus_tag="VFD73_19810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76222.1"
                     /translation="MRDHESSRPRVLALQGTAYLPPFIDDLAELHREGMGPRAWLLEL
                     PFELTQLDQRFLTGPPAWLLALYRRIPMWAAQTLEAFRVRHRYDVVFSWQAGPVALSF
                     ALLLKLTRSRVPMVAIFSWIS"
     gene            695..>1023
                     /locus_tag="VFD73_19815"
     CDS             695..>1023
                     /locus_tag="VFD73_19815"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HZI76223.1"
                     /translation="MSSDPGQWPLVSMIVPTRGRPELVRQALSSVIGQTYPGAIECIV
                     VHDQEPPQPELAELGTASRSVRVVANSRSPGLAGSRNTGVALARGEFIASCDDDDVWH
                     STKLHAQ"
BASE COUNT          196 a          341 c          334 g          152 t
ORIGIN      
        1 gaaatccagc tgaaaatggc caccataggc acccgggagc gggtgagctt gagcagcagg
       61 gcaaacgaca gcgccaccgg tcccgcttgc caggagaaca ccacatcgta gcgatgccgg
      121 acccggaagg cctccagcgt ctgcgcggcc cacatcggga tcctgcggta aagggctagc
      181 agccatgcgg gcgggccggt aaggaaccgc tggtctagct gggtcagctc gaaagggagt
      241 tccagcagcc aggcacgcgg gcccatgcct tcccggtgca gttcggcaag gtcgtcgatg
      301 aatggcggaa ggtaagcggt cccctgcaac gccagcacgc gcggccggct gctttcatga
      361 tccctcataa ccaggcctta cgacgggtca ttactgcacg gcaatccgaa cgcaattgca
      421 ggtcaccacg aaggtgaccg gtcagcacac ggcggagcat accgcctccg cggaacgtag
      481 acccgctccg aatcccgagg acacggcgag gcaaatcgct ccccctgact caagttctgt
      541 cgctctggtg tcagcgatcc gacgcacagg gtaccggctc gcctgccacc gggaccaacg
      601 tacctgcatg acgtgccgga agcgtcgctg ccggaccgta gggtaggttt gcctggctgc
      661 catctcacgg atcccgcaga gaggagcgcc gcgcatgagt agtgaccccg ggcagtggcc
      721 tctcgtctcg atgatcgtgc ccacgcgcgg gcgcccggag ctggtccggc aggcgctctc
      781 ctcggtcatc ggccagacgt atccaggggc gatcgagtgc atcgtggtac atgatcagga
      841 gccgccgcag cctgaactgg cagaactcgg taccgccagc cgcagcgtcc gggtcgtggc
      901 gaacagccgg tcgcctggcc tggcgggctc ccggaacacg ggcgtcgccc tggcccgcgg
      961 cgagttcatc gcgagttgcg acgacgacga cgtctggcac tccaccaagc tgcacgctca
     1021 gat
//
LOCUS       DASRPQ010001745         2118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4598749, whole genome shotgun sequence.
ACCESSION   DASRPQ010001745 DASRPQ010000000
VERSION     DASRPQ010001745.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4598749"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..231)
                     /locus_tag="VFD73_19820"
     CDS             complement(<1..231)
                     /locus_tag="VFD73_19820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76224.1"
                     /translation="MSASSSDRSGAALPAAETSPATRTETRPYIESMIESLRQAGDRP
                     VLRWYGADTTGSQLLAAIYRYARALESLGIARG"
     gene            complement(462..1130)
                     /locus_tag="VFD73_19825"
     CDS             complement(462..1130)
                     /locus_tag="VFD73_19825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76225.1"
                     /translation="MKIKIRHHNGSMPQEDGWSQMGDWLAELGDDSHTEPTGDAHAEA
                     GGTDDPWPEAFAQADARAQADARAEADARAEADARAEADARAEAHGETSVTPTAVMTP
                     YLEPRPVQTTTTPDPVPARPVTATQHNRPRPLEVAECSLCGIALPLGLLVPDGGQACA
                     DIRWYCKDAMSCAHRWTTASPPVPAHIPAAPDDTSRDAEKAAPDRASAELLDDKSEAA
                     QSAV"
BASE COUNT          333 a          671 c          700 g          414 t
ORIGIN      
        1 gccgcgtgcg atgcccagcg actccagcgc gcgggcatac cggtagatcg cggcgagcaa
       61 ctggctaccg gtggtgtcgg cgccgtacca gcgcagcacc ggccgatccc cggcctggcg
      121 cagcgactcg atcatgctct cgatgtaggg gcgggtctcc gtcctcgttg ccgggctggt
      181 ctcggcggcg ggcagcgcgg cgccggatcg gtccgaggac gaggcggaca tcgtggctat
      241 ctccccggat ggcgtgcgga ccgggtcatc ggcctgctca gcgtcgcgag tagtggttca
      301 aatgccccca cgtccgcggt ccgcgcatgt gccacggaat gcggagcggc tggccggatc
      361 atactaaccc gcgccagttt actcagcgtc agatgtccgt ccgtatccgt gcgcccgtct
      421 gggcttgcgc ccgaggggcc gcatccgact acggaggtcg actatacggc ggactgtgcc
      481 gcttcggact tgtcgtccag cagttccgcc gacgctctat caggcgctgc cttctcggca
      541 tcgcgagaag tatcgtcggg agccgctggg atgtgtgcgg gtaccggcgg gctggccgtt
      601 gtccagcggt gcgcgcacga catggcgtcc ttgcagtacc agcggatgtc ggcgcacgcc
      661 tgaccgccat ccgggaccag aaggcccagc ggaagcgcga tgccgcacaa ggagcactcg
      721 gctacctcca acggccgggg ccggttgtgc tgcgtggccg tcactggtct cgccggtacc
      781 ggatcgggag tggtcgttgt ctgaaccggt cgcggttcca ggtatggcgt cattactgcg
      841 gtcggcgtca cggatgtctc cccatgcgcc tcagcgcggg catcggcctc agcgcgggca
      901 tcggcctcag cgcgggcatc ggcctcagcg cgggcatcgg cctgagcgcg ggcatcggcc
      961 tgagcgaagg cttcgggcca gggatcatcg gtgccgcctg cttcggcatg ggcatcgccg
     1021 gtcggctcgg tatggctatc gtcgccgagt tcggcaagcc agtcgcccat ctgggaccag
     1081 ccgtcttcct ggggcatgct gccgttgtga tggcggatct tgatcttcat gtcaggttct
     1141 cccgtcgatc cagggataag cgccgggcag ctgaggtaac cctgccccgg gacagcgaac
     1201 gcagcggaat gacggaccgg gcgaccgctg cgggtcccag acaggccggg ctccggtcac
     1261 acccgagtgc gggattgtcg ggcgctgtga tgagccagta ccggacctgc ctgcctgcgc
     1321 acggcgtgtc cggaggcgtt cgccgccgtt acctttggac cccccttcaa aagcgctggg
     1381 ctcatcctct ctgggcttaa gtgttaccac gatccccacg tcatatcaca acaggataaa
     1441 cgtctggtaa acattcgact catttgccat ttattacagt gcggcatgtg gataattact
     1501 gatttctctg tatgcacagg cctgatttcg cgctctccca ggtaaatgcc ctcttctggt
     1561 tccggctagg ctgcgaaatc cccagcattt ccaccggcta tgcacaggct tgacgccgtt
     1621 gcgcacaagt catccacatg tttgtgcaca gacagcaggg cagcagtcct ctgaccggct
     1681 ggcaggcagc agcggatcgg cacgcacgcc ggtccttgta ggcctggcca gcgcgccgtg
     1741 tgcaggtgtc cgggacacgc tggtcctatc gcccgcccct ggcgggtcgg acaggcgtcc
     1801 gccgctgcca ggctcacgtc gtccgcaggc gagagccaag tcgagagtct gcctgcgccg
     1861 tcgtcggcac cgacatggtc aaggtgttag ccaaccggaa accattatcc gttgcagatg
     1921 gctgccgaat tctatgcttt tatcggttgc tgtgggcatt cttgtgtcgg ccgggacaga
     1981 acctagatat ctgagcgatg cgggccgaca gctaatcgca ggctttttga agctaattta
     2041 gctagattag tgcggcaggc tggaaagcgt tgttatcgtc gacgttcccg ccgtcggtga
     2101 gccgttggct gaggcaca
//
LOCUS       DASRPQ010001746         1185 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1477535, whole genome shotgun sequence.
ACCESSION   DASRPQ010001746 DASRPQ010000000
VERSION     DASRPQ010001746.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1477535"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..102
                     /locus_tag="VFD73_19830"
     tRNA            27..102
                     /locus_tag="VFD73_19830"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:60..62,aa:Thr,seq:ggt)
     gene            complement(763..1056)
                     /locus_tag="VFD73_19835"
     CDS             complement(763..1056)
                     /locus_tag="VFD73_19835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76226.1"
                     /translation="MPVVLVHQGPTITQERYEEAVRRLSGGKSRMETPGDWPVEGLLV
                     HIAGQGEHGFRVVDVWESEDASRRFGDRLMPILQEIGIKEQPEMYSTHTFVSA"
BASE COUNT          216 a          392 c          357 g          220 t
ORIGIN      
        1 ccgccgcggc ggacaagtga agacaggccc ctttagctca gtcggcagag cgtctccatg
       61 gtaaggagaa ggtctacggt tcgattccgt aaaggggctc caggtcagcg gcctgttccg
      121 atcacgggac gggccgtttc gcatgctggt gcagcagcaa agtgcagcaa ccgcatgccc
      181 ggcaccgact tcaggcgccc tccctcggtc gtctgaccta cacagatgac ctctatagac
      241 cttcctgccg ctagttcgca tcgaggagat caggcatcaa gccacttcac aggctgggat
      301 gtgacggact caccccgcag tgccggttcc accagatcta cggctcgctc agttgctgcc
      361 aagcggcggc cctcgtagcg gtaggcactc agagcggcgt cgaccgcatg cggaggggcg
      421 tgctcgagtt ccgccatcaa ccccgccagt cgtccgtcct gccaggcagg gtgggaaagg
      481 tgatcgccag tgaggtcata ccgatccttc cctcaccagt tctccgtgga gggcctcacc
      541 ggcagatgag acggcatgca cggtccgttg gagccgctgg ccaacatgac tcgctgatgg
      601 ccgggcatcc ggcggctgtc gtaggcacag tagcctgcgg tgggcactcc acccatgaca
      661 cttacgcgtc aaactcccga gccaagtgca gcaatcgcac cgtcccgcac tgaccgcatg
      721 cgggactcag cgctgcgctg aacagcgctg gtgtggtcta gctcaggccg atacaaacgt
      781 gtgcgtcgag tacatctccg gctgctcctt gatgccgatt tcctgcagga tcggcatgag
      841 cctgtcgccg aatcggcggg aagcgtcctc ggactcccag acgtcgacta cccggaagcc
      901 atgttcgccc tgtccggcga tatgcaccaa caagccctcg acgggccagt cgccaggcgt
      961 ctccatgcgg ctcttgccgc cgctgagcct gcggacagcc tcctcgtacc gctcctgcgt
     1021 gatagttggt ccctgatgga caagcacgac cggcatcgca atccccccgt tccgatcttg
     1081 cttaatcgag tcagcggcga atgaacaccg ttctgacgcc ctttgcttac gggcggggat
     1141 cgtcgtgccc cggctcggat ggtggcgggt caaagttgac gtcaa
//
LOCUS       DASRPQ010001747         2529 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_830403, whole genome shotgun sequence.
ACCESSION   DASRPQ010001747 DASRPQ010000000
VERSION     DASRPQ010001747.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2529
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_830403"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            203..778
                     /locus_tag="VFD73_19840"
     CDS             203..778
                     /locus_tag="VFD73_19840"
                     /inference="COORDINATES: protein motif:HMM:TIGR01382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HZI76227.1"
                     /translation="MSLHGKTILFFAGPLYEDLELWYPKIRLEEEGARTVVAGTGEKT
                     YQGKRGYPLTVDTSVDEISSDKFDGLVIPGGYAPDIMRRSKKLLQLTREIFESGKPVA
                     FICHAGWVPVSAGIVRGKRGTSVGAIKDDLVNAGLNWEDSPVVVDGNLISSRTPADLG
                     VFCKAFIAALEQPSAVSRQTSARSHRSATPA"
     gene            834..1154
                     /locus_tag="VFD73_19845"
     CDS             834..1154
                     /locus_tag="VFD73_19845"
                     /inference="COORDINATES: protein motif:HMM:NF015758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HZI76228.1"
                     /translation="MTFLNDAQRRVDAWISQFEEGYFDPLTNLARLAEEVGELAREIN
                     HRFGQKTKKPEEPEGDLGMEMADILFVLICMANREGIDLQDSFDRMMQKVEHRDEHRW
                     TRKQ"
     gene            complement(1161..2081)
                     /gene="rsgA"
                     /locus_tag="VFD73_19850"
     CDS             complement(1161..2081)
                     /gene="rsgA"
                     /locus_tag="VFD73_19850"
                     /inference="COORDINATES: protein motif:HMM:TIGR00157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HZI76229.1"
                     /translation="MGTVLERDGAAYRVAVPNGEIRAVLRGKAKRDTPKVVVGDRVQL
                     EPEPAGEYYGIISVEPRTSLLERRVPEGRGTRPVAANIDEVFVVTATVDPAPIPQLID
                     RLLVVAEANSIPAAVVVNKIELDPGCELIQRCQAAGYPVFPTSAKTGQGIPELSAALK
                     GRTSVVTGPSGAGKSSLLNAVQPGLKLRIGEISARVRRGKNTTVAAVMLPLDAGGFLV
                     DTPGFSEVGLWGIEPRELASCFPEMRPFIGLCRYADCRHVTEPGCRIRSAAESGEIQA
                     DRLASYWALLEELETAPREWESGKGGTKRG"
     gene            complement(2156..>2529)
                     /locus_tag="VFD73_19855"
     CDS             complement(2156..>2529)
                     /locus_tag="VFD73_19855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76230.1"
                     /translation="PSQYRIHSGQPRTGVGTRPVSDFTLGGYMQKHQRAAAFGGSDGA
                     AYSVAIYVEDEPDVRGLYGAALLFVRWSPSGDRPVGHVESETLAWGKTPQEAESRLEG
                     LSLYDVKAALDEAIASATGSW"
BASE COUNT          475 a          803 c          779 g          472 t
ORIGIN      
        1 aagtagagag tcgaaagtcg agagtcggaa gtcgagggtc gagggtagca gggtcggcgg
       61 ttaggagaaa ctcctgatcg ccgattctct ttgttgtagg cgctcctcgg gtatactacc
      121 atatcagcga ctatgcaccc gtgactcgcg actcgtgact cgcgactact gttctctaga
      181 ccttagacgt agacaactcc ttatgtccct ccacggaaaa accattctct tctttgccgg
      241 cccgctctac gaagacctgg aactctggta cccgaagatc agactggaag aggaaggcgc
      301 gcgaacggtc gtcgccggaa ccggcgagaa gacctatcaa ggaaagcggg gctacccgct
      361 gaccgtggac accagcgtcg acgagatcag ctccgataag ttcgatggac tggtgatccc
      421 cggcggttac gcacccgaca tcatgcgccg ctcgaagaag ctgctccagc tcactcggga
      481 gatcttcgag tcggggaagc ccgttgcctt tatctgccac gccggctggg tcccggtctc
      541 ggccggcatt gtccggggaa aacgcgggac cagtgtcggc gcgatcaaag acgacttggt
      601 caacgccggc ctcaactggg aggacagccc ggtggtagtg gatgggaatc tgatctcatc
      661 caggacgccg gcggatctgg gggtgttctg taaggcattc attgcggcgt tggagcagcc
      721 ctcagccgtc agtcgtcaga cctcagcacg aagccaccga tcagccacgc cggcctgagg
      781 ggaagcaggg ctcggtcacc ctctgagtac tgacaactga cgactgatga ctgatgacct
      841 tcctcaatga cgctcaacga cgagtcgacg cctggatctc ccaattcgag gagggttact
      901 tcgacccgct caccaatctg gcccggctgg ccgaggaggt gggcgagctg gcccgggaga
      961 tcaatcaccg gttcgggcag aagaccaaga agccggagga gccggagggc gacctcggca
     1021 tggagatggc cgacatcctg ttcgtcctga tttgcatggc caatcgcgaa ggaatcgatt
     1081 tacaggatag ttttgatcgg atgatgcaga aggtcgaaca ccgcgacgag catcgatgga
     1141 caagaaaaca gtgagcccac tcacccccgc ttagtcccgc ctttccctga ctcccactcc
     1201 ctcggcgcgg tctccagctc ctccagcagc gcccagtagc tcgccagccg atcggcctga
     1261 atttctcctg actcggcggc cgagcggatc cggcagcctg gctcggtgac gtggcggcaa
     1321 tcggcatagc ggcaaaggcc aatgaaaggc cgcatttccg gaaagcagct cgccagctct
     1381 ctcggttcga ttccccacag tccgacttca ctgaaccctg gcgtgtccac caagaaccca
     1441 ccggcatcga gtggcagcat gactgcggcg acggtggtgt tcttgccccg tcgaacccgg
     1501 gcgctgatct cgccgatgcg aagcttgaga ccgggctgca ccgcgttcag caggctggat
     1561 tttccggcgc ccgacgggcc ggtcactacc gaggttcgtc ccttgagtgc ggcagagagc
     1621 tccggaatgc cctgaccagt cttggcactg gtggggaata ccggatagcc ggcggcctgg
     1681 caccgctgga taagctcgca gccgggatcg agctctattt tgttgaccac cacagcggca
     1741 ggaatggagt tggcttcagc cacaacgagc aggcggtcga tcagctgggg gatcggcgcg
     1801 ggatccaccg tcgcggtgac cacgaagact tcgtcgatgt tggcggccac cggccgagtc
     1861 cctctccctt cgggcacccg ccgttccagg agtgaggttc ggggctcgac gctgatgatg
     1921 ccgtaatact cgccggccgg ctcgggttcc agctggaccc ggtcgccaac gacaactttg
     1981 ggtgtgtcac gctttgcctt gccccggagg acagcgcgaa tctcgccgtt gggcaccgcc
     2041 acccggtacg ctgccccatc ccgctccagc acagttccca cccagcccgg gtgtttcgcg
     2101 ctgctgcttc cacttaccgt tccgctttcc ctctcacccc tcacgctctc gctgttcacc
     2161 acgacccggt tgcgctggcg atcgcctcgt ccagtgcggc tttcacatcg tagagcgaga
     2221 gtccctcgag ccgagattcg gcttcttgtg gtgtcttccc ccaggcgagc gtctccgact
     2281 cgacgtggcc gacggggcgg tcgcctgagg gagaccagcg gacgaagagc aaggctgcgc
     2341 cgtagagtcc ccgtacgtcg ggctcgtcct cgacgtagat cgcgaccgag tacgcggcgc
     2401 catcgctccc gccgaacgcg gcggcgcgct ggtgcttttg catgtagccg cccagggtaa
     2461 agtcgctcac cggcctggta ccgactcccg tacgaggttg cccagaatga atgcgatatt
     2521 ggctgggcg
//
LOCUS       DASRPQ010001748         1192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3020299, whole genome shotgun sequence.
ACCESSION   DASRPQ010001748 DASRPQ010000000
VERSION     DASRPQ010001748.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3020299"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(53..>1192)
                     /locus_tag="VFD73_19860"
     CDS             complement(53..>1192)
                     /locus_tag="VFD73_19860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76231.1"
                     /translation="TVREDRFARLLRSVRFGLLLAGAEVDVKGCYWGDIAAIDKFPGL
                     SIPSYRHGARGVAADPADPSWLEDPLGGLRRLRDPEDLEPLHGLAAVPESVRLRNTAL
                     AGAQAPIVERLGAVLPEVLDPDQSLPDHALPRLTLNVLEMAAKANRTLTAVALIHDIA
                     EALVASVFVEASGGTAGPDTEFHWTTAYEAAAGALSEQFGAERGGHNLGARILTTGLR
                     WGGRKAAMNALAIGIGDVLVHASHREQILKRLDQEVRRIPDDNQLVLVGHSLGGVIAF
                     EYCRIAYRPVQHLVTVGSQVGLFGELGVYGRDHDRATGQLRRGADAGTWVNLYDPADA
                     LGFLAGPVFPDVTDIEIVTGAPFPVCHSEYWNRTQTYRHLCETLQ"
BASE COUNT          222 a          386 c          381 g          203 t
ORIGIN      
        1 ctcaagtcgg tgtaatcacg aatgccaatg actacagcga agtcctggct gctcactgca
       61 gggtctcgca aagatgccga tatgtctgag ttctgttcca gtattcgcta tggcatacgg
      121 ggaagggtgc gccggtaacg atctcgatgt ccgtgacgtc aggaaaaaca ggacccgcga
      181 ggaatcccag cgcgtcggct ggatcgtaga gattaaccca ggtaccagcg tccgctcccc
      241 gccgcaactg gccagtcgcc ctatcgtgat cgcgtccata gacgccgagt tcaccgaaga
      301 gcccgacttg actgcctacc gtcaccaggt gctggaccgg acggtaggcg atgcggcagt
      361 actcgaaggc gatgactccc ccgagactgt ggcccaccag cactagctga ttatcgtccg
      421 ggatccggcg gacttcctgg tcgagtcgct tcagtatctg ctcgcggtga ctggcgtgga
      481 cgaggacatc accgatcccg atggcgaggg cattcatggc tgccttccgc ccaccccagc
      541 gcagaccggt cgtgagtatc cgggcgccca ggttgtgccc tccgcgttcc gcaccgaact
      601 gctcggacag tgcgcccgcc gcggcctcgt aggccgtcgt ccagtggaac tcggtatccg
      661 ggccggcggt gccgccggac gcctcgacga agacggacgc gacgagagct tcggcaatgt
      721 catgaatcag cgctaccgca gtgagggtac ggttggcctt cgccgccatc tccaggacat
      781 tgagggtaag cctcgggagg gcgtggtccg gcagtgattg gtctgggtcc agcacctccg
      841 gtagcaccgc gccaagccgc tcgactatcg gtgcctgcgc gccagccaac gccgtgttcc
      901 ggagccgaac ggattctggc actgcggcga gaccatgcag aggctcgaga tcttccgggt
      961 ctcgcagccg gcggagcccg ccaagcgggt cctctagcca ggaaggatcc gccggatcgg
     1021 cagccacgcc acgcgcgccg tgccggtacg aggggattga caagcccggg aacttgtcga
     1081 tggccgcgat atcgccccag tagcagcctt tgacgtccac ttctgcgcct gcgagcagca
     1141 gaccgaaacg gacggatcgc agcaggcgcg cgaaccggtc ctcacggaca gt
//
LOCUS       DASRPQ010001749         1309 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3020340, whole genome shotgun sequence.
ACCESSION   DASRPQ010001749 DASRPQ010000000
VERSION     DASRPQ010001749.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3020340"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            44..>1309
                     /locus_tag="VFD73_19865"
     CDS             44..>1309
                     /locus_tag="VFD73_19865"
                     /inference="COORDINATES: protein motif:HMM:NF012618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HZI76232.1"
                     /translation="MAVLEGHTRRVRALAFAPDGSRLASASYDGTIKLWQVAEASSQH
                     LRQTLVGHTEGVQSLAWSPDGSTLASGGQDHTIRLWEGESQSARAVLQGHSATIYGLA
                     FIPGTRHLVSASEDGTLRMWATESGELLRIMQGYTLALYDVAWSPDGSQLVCAGLDGQ
                     VTLWEAGTSTAPRMLGGHIGSVYSVGWSPDGSRLASCGLDQKIRLWDPTTGTCVQLLR
                     DPNVEDTLLFSLAWRPDGHALACGTLLQGVRIWDVTTGSQFEVDGTQANSIRQVAWNS
                     SGTRLVGAGEDGYVYVWDASSNRLLQLAGHLGIVTSVAWSRDDQWVASGSSIGDRGEL
                     RVWNADSGECVCVMEKHPRGISALAWAPNGDRVVSGDSEGKLCWWDVDSGKCVQVQEA
                     HQGVVRSLSLSPDGTTLVSCGDDGAIVFCD"
BASE COUNT          241 a          345 c          468 g          255 t
ORIGIN      
        1 gattcgcttg tgggagcggc gagagacctc gtcacttgaa tgtatggccg tgctggaggg
       61 acacacccgg cgggtgcggg cactagcctt tgccccggat ggcagccgtc tcgccagcgc
      121 tagttatgac ggcaccatca agctctggca ggtggcagag gcatcaagtc agcatttgcg
      181 tcagacgctg gttggacata cggagggcgt gcaatccctg gcctggagcc cggatggcag
      241 caccttggcc agcggtggcc aggaccacac catccggctc tgggaagggg aatcgcagag
      301 cgctcgagcg gtgctgcaag gccattccgc cacaatctac ggcctagcat ttatccccgg
      361 tacccgccat ctggtcagcg ccagtgagga tggtacgcta cggatgtggg cgacagagag
      421 tggtgagttg ctgcggatca tgcagggcta tacgttggcc ctgtacgatg tggcctggag
      481 tccggatggt tcccagctcg tctgtgccgg cctggatggc caggtgacgc tttgggaggc
      541 aggaacgagc acagcgccta gaatgttggg cggacacatc gggagcgtgt atagtgtggg
      601 ttggagtccc gatggtagcc ggcttgccag ttgtggccta gatcagaaga tccggttgtg
      661 ggatcccacc actggcacct gtgtccagct cctccgggac cccaacgtgg aggacactct
      721 cttattcagt ttagcatggc ggcctgatgg gcacgctctg gcctgcggaa ccctgctgca
      781 gggcgtgcgg atttgggatg taaccaccgg ttcccagttc gaagtggatg gcacccaagc
      841 caactccatc cgtcaggttg cttggaactc cagcggaacg cgactggtcg gcgcgggcga
      901 agatggctac gtctatgtct gggacgcgag cagcaaccgg ctgctgcagt tggcaggaca
      961 tctcgggatc gtcactagtg tggcatggag ccgcgacgac caatgggtcg cctcgggtag
     1021 cagcatcggg gacaggggcg agctgcgcgt gtggaacgcc gacagcgggg agtgcgtgtg
     1081 tgtcatggag aagcatccac gggggatttc ggcgctggcc tgggctccga acggtgaccg
     1141 agtagtgagc ggagacagtg agggcaagct gtgctggtgg gatgtagaca gtgggaagtg
     1201 tgttcaggtg caagaagctc atcagggcgt ggtgcggtca cttagcctga gccccgatgg
     1261 caccacgctg gttagctgtg gcgatgatgg agccatcgtg ttctgcgat
//
LOCUS       DASRPQ010001750         3785 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4599312, whole genome shotgun sequence.
ACCESSION   DASRPQ010001750 DASRPQ010000000
VERSION     DASRPQ010001750.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3785
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4599312"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1153
                     /gene="glyA"
                     /locus_tag="VFD73_19870"
     CDS             <1..1153
                     /gene="glyA"
                     /locus_tag="VFD73_19870"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HZI76233.1"
                     /translation="LTNKYAEGYPGRRYYGGCEVVDEIEQLAIDRLKQLFGAEHANVQ
                     PHSGAQANFAAFMALIRPGELLLGMSLPHGGHLSHGAAVNHSGVVWRAIHYGVDPVTG
                     RIDYDKVRDQARKERPRLIIAGGSAYARIIDFAAFRSIADEIGAFFLVDMAHFAGLVA
                     GGVYPSPVPHAQVVTSTTHKTLRGPRAGLILSTMEYAKAIDKSVFPGTQGGPLQHIIA
                     AKAVAFGEALTEDFKRYSRQVVENARTLADALTERGFAIVSGGTDSHLMLVDLRPKDL
                     TGKAAEKLLGEAGITVNKNTIPDDPQSPFVTSGIRLGTPAVTTRGMGVAEMRLVAELI
                     DRALTHPDENTLSQIRGEVEELTAAFPLYQSKNPAGRPRPRPALVETHQ"
     gene            1150..1536
                     /locus_tag="VFD73_19875"
     CDS             1150..1536
                     /locus_tag="VFD73_19875"
                     /inference="COORDINATES: protein motif:HMM:TIGR04138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Minf_1886 family protein"
                     /protein_id="HZI76234.1"
                     /translation="MNDLQFADDVLARIRAQGGQYHERGYLFVLASIEFLQSRLEVRR
                     HVTAPELAWSCRDLARQQFGLMAPTVLAHWGITRTEDIGRIVFTLVEIGLLVTQPGDH
                     ESDFEAVYQFGDVFGDSYEWQGLRGA"
     gene            1559..1753
                     /locus_tag="VFD73_19880"
     CDS             1559..1753
                     /locus_tag="VFD73_19880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76235.1"
                     /translation="METKEWPACQKCSQGTLIPLSDYGREGAPITYKAWVCTNPDCGF
                     NLRIDNGEISFGRAIGQSYK"
     gene            1779..3326
                     /locus_tag="VFD73_19885"
     CDS             1779..3326
                     /locus_tag="VFD73_19885"
                     /inference="COORDINATES: protein motif:HMM:TIGR00196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HZI76236.1"
                     /translation="MQIPVLTPEQSNQWDERAERAGIARATLMESAGRAAAAVLADRY
                     GHVLPGGVLVAAGPGNNGGDGWVLARALHRADVPVWVAGMPSSSELCARVAELARAEG
                     VRQVAPDGPWPTVALAVDALLGTGATGSPRPAVATLLDRVVDLEIPIASIDGPTGVDL
                     LSGVVHGPARADLSITFGGLRRGHLLARDEVGALVVVDIGHPPPDPCWPSLVTSLQAA
                     EWQRRLRPRDHKGDRGRVVIVGGAPGMSGALRMAARAAFGAGAGLVHAVAPAETIAQL
                     VQAEPDVQTFSHPFDTAPSAELLELVAKADALAIGPGLGRSPGRRAFVSALVQAANRV
                     IIDADGLVAFGGAEAELRKLADGRSVVLTPHPGEFRTLFPALASTRELDPWAAATEAA
                     ERSATTLLLKGVPTVIASSSGAPLTVAAGNPGLATGGSGDILTGLVGANLAQGLEPMT
                     AAAVAAHTLGSAADIAARRFTARGARPMDVVAALPDVWRDWEMLQSGRTPSRPPVLLE
                     LPRPQTV"
     gene            3341..>3785
                     /locus_tag="VFD73_19890"
     CDS             3341..>3785
                     /locus_tag="VFD73_19890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76237.1"
                     /translation="MRCVLALAFLLSLSSRGPAAAQSPTRDWRPEDRTIIGDFTRISA
                     IATTMDRVYIVSPSGVLLWNPQFQKWDGVVDPPDPGLLAGVFTGLADPLDNSLWLAAS
                     NSWVHYQPDIQLWEHGVVPDGVLGIAFDHNDPGAGLYLRTRSGWLQ"
BASE COUNT          626 a         1218 c         1243 g          698 t
ORIGIN      
        1 gctgaccaac aagtacgccg agggctaccc cggccggcgg tactatggag gctgcgaagt
       61 ggtcgacgag atcgagcagt tggcgatcga ccggctcaag cagttgttcg gcgccgaaca
      121 cgccaacgtg caacctcatt ccggcgccca ggccaacttc gccgcgttta tggcactgat
      181 tcgtcccggc gagttgctgc tgggcatgtc gctgccgcac ggcgggcacc tctctcatgg
      241 cgcggcggtc aatcacagcg gcgtggtctg gcgggccatc cactacgggg tcgacccggt
      301 caccggccgg atcgattacg acaaggtgcg cgaccaggcc cgcaaggaac gtccccggct
      361 catcatcgcc ggcggcagcg cctatgcccg gatcatcgac tttgcggcgt ttcgctctat
      421 tgcggatgag atcggcgcct tcttcctggt cgacatggcc cactttgcgg gtctggtggc
      481 gggtggagtg tatccttcgc cggtgccgca cgcccaggtg gtcaccagta ctacccacaa
      541 gacactcaga gggccgcggg ccgggttgat cctgtctacc atggaatacg ccaaggccat
      601 tgataagtcg gtcttccctg gcacccaggg cggtcctctc cagcatatca ttgccgccaa
      661 ggcggtcgcc tttggcgaag cattgactga ggatttcaag cgctactcgc gtcaggtcgt
      721 ggagaacgcc cggacgctgg ccgatgcgct gaccgagcgg ggcttcgcga tcgtatccgg
      781 cggaaccgat tcgcacttga tgctggttga cctccggccc aaggatctga ccggcaaggc
      841 agcggaaaag ctgctgggtg aggccgggat cacggtgaac aagaacacca ttccagacga
      901 tccccagtcg cccttcgtca ccagcggaat tcggctgggg acgcccgcgg tcacaacccg
      961 aggcatgggc gtcgcggaga tgcgcctggt tgccgagctg atcgaccggg ctctgacgca
     1021 ccccgacgaa aacacgttgt cgcagatccg cggcgaggtc gaagagctga ccgctgcgtt
     1081 ccccctttac caatccaaga atccagccgg caggccgcgt cctcggcctg cgctggtcga
     1141 gacgcaccag tgaacgatct gcaatttgct gacgatgtac ttgcccgcat ccgcgcccag
     1201 ggcggacaat accacgagcg cggatacctt ttcgttctcg cgagcatcga gttcctgcaa
     1261 tcccggttgg aggtccgacg gcacgtgacc gcgcccgagc tggcctggtc ctgccgcgac
     1321 ctcgcccgcc agcagtttgg cctgatggcc ccgacggttc tggcgcattg gggtattacc
     1381 cggaccgagg atatcggacg catcgtattc accttggtcg agatcggctt gctggtcact
     1441 cagccaggcg atcacgagtc cgacttcgag gcggtctatc aattcggcga tgttttcggc
     1501 gactcctacg agtggcaagg gttgcgggga gcgtaacagg tcacgggggg aggggcgtat
     1561 ggagacgaaa gagtggccgg cctgtcagaa gtgctctcag gggacgctca tcccactatc
     1621 ggactacggc cgggaaggcg cgccgatcac ctacaaggcc tgggtctgca ccaaccctga
     1681 ctgcgggttc aatctgcgga tcgacaacgg cgagatcagc ttcgggcggg cgattggaca
     1741 gtcctacaag taggtgagcg gtaaaagttc cgtcctagat gcaaatcccc gtccttactc
     1801 ccgaacaatc caaccaatgg gatgagcgcg cggagcgcgc cggcatcgcg cgcgccacgc
     1861 tgatggagag cgccggccgg gctgccgccg cggtgctggc cgatcggtac gggcatgtac
     1921 tcccgggcgg cgtgctggtg gcggccggcc cgggaaacaa tggaggagac ggctgggttc
     1981 tggcccgcgc gctgcaccgc gccgacgttc cggtctgggt tgccggaatg cccagcagct
     2041 cggagctgtg tgctcgtgtc gccgagcttg cgagagcgga gggagtaagg caggtcgctc
     2101 ctgatggtcc gtggcctacc gttgctcttg cagtggacgc gctgctcggc accggtgcca
     2161 cgggatcgcc ccggcccgct gttgccaccc tgctggatcg agtggtggac ctcgagatcc
     2221 ccatcgcctc tatcgacgga ccaaccggag tggacctcct ctccggcgtg gtacatgggc
     2281 ccgcccgcgc cgatctctcc atcacctttg gcggactgcg ccgaggccac ctgctggcgc
     2341 gcgatgaagt cggtgctctg gtcgtggtag atatcggcca tcctccaccc gacccctgtt
     2401 ggcccagcct ggtcacgtcg ctccaagccg ccgaatggca gcggcggctt cgtcctcgcg
     2461 accacaaagg tgatcgcggg cgcgtagtca tcgtgggtgg tgctcccggc atgagcggtg
     2521 ctctccggat ggccgcgcgg gcggcctttg gtgcgggagc gggtctggtg cacgccgttg
     2581 ctccggcgga gacgattgcg cagctggtgc aagccgagcc cgacgtgcag acgttcagtc
     2641 atccgttcga tactgcaccg agtgccgagc tgctcgagtt ggtggcgaag gcggatgcgt
     2701 tggctatcgg tcctgggctg gggcgaagtc ccgggcgtcg ggcgttcgtg tcagccctgg
     2761 ttcaggcagc aaacagagtc atcattgacg ccgatggcct ggtcgccttt ggcggagcgg
     2821 aggcagagct ccggaaactg gccgacggga gatcggtcgt cctcacacct catccaggcg
     2881 agtttcggac gctctttccc gcgctcgcat cgacccgcga gttggatcct tgggcggcag
     2941 caacggaagc cgctgagcgc tccgcgacca cactcctgct gaagggtgtg ccgacggtca
     3001 tcgcctcatc cagcggagca cctctcaccg tcgcagccgg gaaccccggg ctcgccactg
     3061 gagggagtgg tgacatcctc accggtttgg tgggagccaa tctggcgcag gggctcgagc
     3121 cgatgaccgc agcggctgtt gctgcgcaca cgctcggcag tgccgctgat attgccgcaa
     3181 ggcggttcac cgcccgtggc gcaaggccaa tggacgtggt cgccgcattg cccgatgtct
     3241 ggcgcgattg ggagatgttg cagagtggac ggactccgtc ccggcctccg gtgctcctgg
     3301 agcttccccg tccccagacg gtctgagtgt agattgccga atgcgctgtg ttcttgccct
     3361 cgccttccta ctctcactct cgtcacgcgg ccccgcagcc gcacaatcgc cgaccagaga
     3421 ctggcgccca gaagaccgaa ccatcatcgg tgactttact cggatctcgg ccatcgcaac
     3481 cacgatggac cgggtctaca tcgtctctcc gtccggcgtc ctgctctgga atccgcaatt
     3541 ccaaaaatgg gacggcgtgg tggaccctcc ggatccaggg ttattggctg gtgtgttcac
     3601 cggcctggcc gacccactgg acaactcgct ctggctggcg gcctcgaaca gctgggtcca
     3661 ctatcagccc gacattcagc tctgggagca cggtgtggtt cccgatggtg tgctcgggat
     3721 cgctttcgac cacaacgatc cgggtgcagg cctctacctg cgcacccggt caggctggct
     3781 gcaga
//
LOCUS       DASRPQ010001751         1155 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4599427, whole genome shotgun sequence.
ACCESSION   DASRPQ010001751 DASRPQ010000000
VERSION     DASRPQ010001751.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4599427"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..987)
                     /locus_tag="VFD73_19895"
     CDS             complement(37..987)
                     /locus_tag="VFD73_19895"
                     /inference="COORDINATES: protein motif:HMM:NF016629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HZI76238.1"
                     /translation="MADHDNGYKLLFSHAETVADFLRGFVKEDWVRELDLSTLERVDG
                     TYVSDDLRSRESDVVWRVSWRGRPLYIYLLLEFQSTVDRYMAVRVMTYLGLLYQDLIR
                     QRTLPPSGLLPPVFLAGLYNGERAWQAPFDVADLIGPVPGGLDAYRPRLRYVLFDELR
                     LPDVSTEERENLVAALFRLEQARLPADFARKIGELAELLRANEDLRRSFTTWLTRVLL
                     PSRFREVRFPEIQDLQEIQTMGLAERVMELTREWEEQGRQQGRESLQDVVLSLLEQRF
                     GAAVSADTRSRVHSIHDLDELNRIAKGVLRARSLRDLGLE"
BASE COUNT          234 a          388 c          333 g          200 t
ORIGIN      
        1 tgggacgggc tcgtgggaac gggcccgtcc gtggactcat tcgaggccaa gatcccgcaa
       61 ggagcgggcg cgcaggactc cttttgcgat tctgttcagc tcgtcgaggt catggattga
      121 gtgcacacgg cttcgcgtat ccgccgatac cgcggcaccg aagcgctgct ccaagaggga
      181 gaggacgaca tcctgtaggc tctcgcgccc ctgctgtcga ccttgctctt cccactcccg
      241 ggtcaattcc attacgcgct ctgccaagcc catggtttga atctcctgta gatcctggat
      301 ctccggaaat cgcacttccc gaaatcgtga cggcagaagc acccgcgtca gccatgtggt
      361 gaacgaccgg cgaaggtcct cgtttgcccg aagcagctca gccaactcgc cgatcttcct
      421 tgcaaaatcc gccgggagcc gcgcctgttc tagccggaac agggccgcca cgaggttctc
      481 tcgctcctcc gtggacacgt ccggcaaccg cagctcatcg aacaacacgt agcggagccg
      541 ggggcgatag gcatccagac ctcccggcac cggcccgatc aggtcggcaa cgtcgaaagg
      601 agcctgccaa gcccgctccc cattatagag acccgccagg aagacgggcg gcaggagccc
      661 ggaaggcggt aaggttctct gccggattag atcctggtag agcaaaccca agtaggtcat
      721 cacccggacc gccatgtacc ggtccaccgt ggactggaac tccagcagca ggtagatgta
      781 gagcggccgg ccgcgccagg aaacccgcca cacaacgtcg ctctcccggg agcggaggtc
      841 gtcgctgacg taggtcccgt ccacccgctc cagggtggag agatccagct cccggaccca
      901 gtcctccttg acgaaacctc ggaggaaatc cgccaccgtc tcggcatggg aaaacagcag
      961 cttgtagccg ttatcgtgat ccgccatccc tcccccggaa cgcctggacg tgctctgttg
     1021 tccgacagac gatactacag ccgctccgag tatcccagag ccgttccaag cggctcagag
     1081 ccattctgaa tccaaaaaag tggttccgag cgtttcgcag ccacttccag cggctcggaa
     1141 cggttccgaa gctct
//
LOCUS       DASRPQ010001752         3059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_213152, whole genome shotgun sequence.
ACCESSION   DASRPQ010001752 DASRPQ010000000
VERSION     DASRPQ010001752.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3059
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213152"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1479)
                     /locus_tag="VFD73_19900"
     CDS             complement(<1..1479)
                     /locus_tag="VFD73_19900"
                     /inference="COORDINATES: protein motif:HMM:NF014045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HZI76239.1"
                     /translation="MNRPLIRPGRHLSQPQVHAPHAALLIDFDNVTLGIQKDLTKELR
                     TLLNSDIIKGKVAVQRAYADWRRYPQYIVPLSESSIDLIFAPAFGSSKKNATDIRLAI
                     DAIELVFTRPEIGMFILLSGDSDFSTMVIKLKEYGKYVIGVGIRESASDLLIQNCDEY
                     YSYNDLAGLTKEVDTPSTQRDPWELAGEAVAQMARNGDVMRSDRLKQVMQQIDPNFDE
                     RNAGFNRFSKFVIEAGQKGVVLLNKLDNGQYEVAPGPGAKPASAEPAHRPRPGAEPGR
                     EGREEGARRGRGRRGRGGRDRSGRDAGPRTNGHARPEAGYRPSQREERPETGLTLARA
                     FQLMSQALSEFRSPVGQEALRLRMVAMHGREDPLLDASRFPRLLRQANDAEVADVRKV
                     GDDDYEISAQRTGLQPSVPPASSLAEPASTTPSEPVTAEATAPAGGRENGQRLGVRFR
                     RGSRAPMRPGDIPLIGVVQMEPPASATAEAETAQPDVSEQPAR"
     gene            complement(1699..2871)
                     /locus_tag="VFD73_19905"
     CDS             complement(1699..2871)
                     /locus_tag="VFD73_19905"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HZI76240.1"
                     /translation="MTPEALLPASSSGERRRTAQEARPPVHAWDPDGPLASSVAPQLW
                     DALRESVLWAEAEWERVVEHAAGAEEATAHLAQLSAAIRQEASGATSDLSGVPRNALS
                     RRLLGLIRSAFISRARTLPAPEPTQLLRVLHAIEVVGQHLEADWSQHFTDRLSAPDGL
                     ELVVEVAHDLRSPLTSILFLAETLQRGRSGAVNPVQERQLGLIYSAAFGLSSVASDVI
                     ELARGGDRLVDLDPIPFSVTDILESVRDIVQPIAEEKNLSVKVTSPDADFRIGHPVAL
                     SRVLLNLTTNALKFTAEGSVEVTAIARNSRCIEFSVRDTGRGIPPQSMATLFEPFRRR
                     QKPGEYTFSGSGLGLSICRKLVEAMGSVLQVETASGFGTRFYFVLDLPLAGEAQFG"
     gene            complement(2868..>3059)
                     /locus_tag="VFD73_19910"
     CDS             complement(2868..>3059)
                     /locus_tag="VFD73_19910"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI76241.1"
                     /translation="EAYHPAKDRVVVQFEKEYLTRLISRAGGNMSKAARLASIDRTTL
                     YRLMDKHEFQRDDGPGSPA"
BASE COUNT          533 a          999 c          969 g          558 t
ORIGIN      
        1 ccgagccggc tgttcgctca cgtctggttg agccgtttca gcctcggccg tcgccgaagc
       61 cgggggctcc atctgcacca cgccgatgag ggggatgtct ccgggccgca tcggcgcccg
      121 tgagccgcgg cggaatcgga cgccgagcct ttggccgttt tctcgcccgc ccgctggcgc
      181 agtggcttcg gcggtgacag gctccgacgg tgtcgtgcta gccggttctg ccagcgatga
      241 ggcgggaggc acggacggct gcaggccagt gcgttgggcc gaaatctcgt agtcgtcatc
      301 gccgaccttc cgaacatcgg caacttccgc gtcattagcc tggcggagca gacgggggaa
      361 acggctggca tcgagcaagg ggtcttcccg cccgtgcatt gccaccattc tcagacggag
      421 cgcctcctgc cccaccggcg aacggaattc cgagagggcc tgggacatca gctgaaacgc
      481 acgcgcgagg gtcagccccg tttccggccg ttcttctctc tgggatgggc gatacccggc
      541 ctccggccgg gcgtgcccgt tagtcctggg tcccgcgtct cgtcccgacc ggtcacgtcc
      601 gccacgccct cggcgacccc gcccccgccg tgcgccttcc tcacgtccct cgcggccagg
      661 ctccgcgccg ggccttgggc ggtgagctgg ctcggcagag gccggctttg cgcccggacc
      721 aggagcgacc tcgtattgac cattgtccag cttgttcaac agcacgacgc ccttttgccc
      781 agcctcgatc acaaacttgc tgaaccggtt gaagcccgcg ttgcgctcgt caaagttcgg
      841 gtcgatctgt tgcatcacct gcttgaggcg gtccgaacgc atgacgtccc cattgcgcgc
      901 catctgcgcg accgcctcac cggccagctc ccacggatct cgctgagtcg acggggtgtc
      961 gacctccttc gtaagaccag cgagatcgtt atacgagtag tactcgtcgc agttctggat
     1021 caggagatcg ctggccgact ccctgatgcc gaccccgatg acgtactttc cgtattcctt
     1081 cagcttgatc accatcgtcg agaagtcgct gtcgcccgac aacagaatga acatgccgat
     1141 ctcgggccgg gtaaacacca attcgatggc gtcgatggcc agccggatat cggttgcgtt
     1201 tttcttgctg gagccaaagg cgggcgcgaa gatcagatcg atggaagatt cggagagcgg
     1261 aacgatgtac tggggatagc ggcgccagtc ggcatacgcc cgttgaactg cgacctttcc
     1321 tttgatgata tcgctgttga ggagagtgcg tagttctttg gtgaggtctt tctgaatgcc
     1381 gagtgtgacg ttgtcgaagt cgatcaacaa ggcggcgtgg ggggcatgaa cttggggctg
     1441 gctgagatgt cgccccggcc gaatcagcgg tcgattcaca gagtgctcgg tgtcaggcct
     1501 gcctcctgcg cgagccccca tggtgataac cacgagagct cacgaggccg gaagcctttt
     1561 gtggaggcgc acggcagctc ggtcgagctc gctccagttc gtgcgccaag tctgaccgca
     1621 ctcaccagct tcgatgcaca ggcacgagga caggaagcgc cggtcagtaa gcaaatctat
     1681 cgggtcgccc tgcccagttc aaccaaattg cgcctcaccc gccagcggca agtcgagcac
     1741 gaaatagaac ctggtgccga agcctgaggc cgtttccacc tggaggacag accccattgc
     1801 ctccacgagt ttgcggcaga tggacaaacc cagaccggag ccggagaagg tgtattcgcc
     1861 cggcttctgc cgccgtcgaa acggctcgaa caacgtcgcc atggattggg gcgggattcc
     1921 ccgccccgta tcccggacgg agaactcgat gcaccgcgag ttccgggcga tggcagtcac
     1981 ctcgaccgaa ccttccgcgg tgaacttcag cgcattggtg gtgaggttca gcagaacgcg
     2041 actgagcgca accggatggc cgatcctgaa atccgcatcc ggagaggtca ccttgacgct
     2101 gagatttttc tcttcggcga tcggctgaac gatgtcccga accgattcca ggatgtccgt
     2161 gaccgagaat ggaatcggat ccagatcgac cagccggtcg cccccgcgcg ccagctcgat
     2221 cacatcgctc gcgacggagc tgagtccaaa cgcggcgctg taaatcagac cgagctggcg
     2281 ctcttggacc gggttgaccg ccccgctgcg cccgcgctga agcgtctccg ccaggaagag
     2341 aatcgaggtc aagggggagc gcaggtcgtg ggcgacctcg accaccagct ccagaccatc
     2401 gggcgcagag agccggtcgg taaaatgttg cgaccagtcc gcctcgagat gctggcccac
     2461 cacttcgatc gcgtgaagaa ctcgcaggag ctgcgttggc tcgggcgcag gcaatgtgcg
     2521 cgcccgactg atgaaggcac tacggatcaa gccgagcagc cggcgggaaa gggcgtttcg
     2581 agggactcca ctcagatccg aggtagcgcc ggacgcttcc tgccggatgg ccgcgctcag
     2641 ctgcgccaga tgagcggtgg cttcctccgc tcctgccgca tgctcgacca cgcgctccca
     2701 ctcggcctcg gcccatagca ccgattcgcg cagggcgtcc cagagttggg gggcgacgga
     2761 gctcgccagt ggcccatcag ggtcccaggc gtgaaccgga ggccgcgctt cctgtgcggt
     2821 ccggcgccgc tccccgctgg aggacgccgg cagcagcgcc tctggggtca cgccggtgat
     2881 cccggcccgt cgtcccgctg aaattcgtgc ttgtccatca gccggtacaa tgtcgtccgg
     2941 tcgatgctcg cgagacgcgc ggccttggac atgttccccc ctgctcggct gatcaggcga
     3001 gtcagatact ccttctcgaa ctggacgacc accctgtcct ttgccgggtg ataggcctc
//
LOCUS       DASRPQ010001753         3901 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3969368, whole genome shotgun sequence.
ACCESSION   DASRPQ010001753 DASRPQ010000000
VERSION     DASRPQ010001753.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3901
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3969368"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..885)
                     /gene="rseP"
                     /locus_tag="VFD73_19915"
     CDS             complement(<1..885)
                     /gene="rseP"
                     /locus_tag="VFD73_19915"
                     /inference="COORDINATES: protein motif:HMM:TIGR00054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HZI76242.1"
                     /translation="MLINVLALIIVLGVLIFVHEAGHFVAAKWAGIYVHRFSLGLGAP
                     IPWLTFRRGETEYSISWLPLGGYVKMASREEDVGSSALEGGAPAVQVPADRMFEAQPI
                     WKRMIVILAGVTMNALFAWLVFSGLAYSNGRQIDPVTTVGHVETYQLPKEAEPLLQIQ
                     PGSRIVRINGDTVTSWDAIVNGITNAPQPTIRIDLAGGSTVVLRIHPDALDERIRAGQ
                     ALQPYRLPVIDTVLPGKPAAAAGIQKGDTVVAVNGRPVRQWYDLLDVVQRSAGHSLTI
                     SVARGADHILPFTLKPFLD"
     gene            complement(879..2069)
                     /gene="dxr"
                     /locus_tag="VFD73_19920"
     CDS             complement(879..2069)
                     /gene="dxr"
                     /locus_tag="VFD73_19920"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HZI76243.1"
                     /translation="MARSSVEIAQAPGPVQQPSGGRQRGIALLGSTGSIGRSTLDVLR
                     RQPEHFRLVALTAGCNRDELEAQVAEWRPAYAGLAGVLGDGRWPSGAEVLVNAATHPD
                     ADIVVNAVVGAAGLEATLAALRAGKRVALANKETLVMAGELVAQAACAGGGQIVPIDS
                     EHSAVLQCITGRDDGLARLILTASGGPFREWEPERVWHATVEEALQHPTWRMGAKITV
                     DCATLANKALELIEAHYLFGLPYSDLEVVVHPQSIIHAFVEFQDGSVLAQLGFPSMEL
                     PILYALTHPERLPDSGVRRFDPVSAGPLTFEPVRSDVFSALGSGLSAGRAGGTAPAVF
                     NAANEVAVAAFLRGGIPFGRISEIIAETLSAHSPVPANSIEAVRWADAWARDKAGQTL
                     RQTC"
     gene            complement(2069..2941)
                     /locus_tag="VFD73_19925"
     CDS             complement(2069..2941)
                     /locus_tag="VFD73_19925"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: protein motif:HMM:NF013327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004605 - phosphatidate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0016024 - CDP-diacylglycerol biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HZI76244.1"
                     /translation="MSADGNLIRRVLFAVIAIPLALALVWYGGIPLAIVLAIAAVLGA
                     RELFDLAARQGVQPLRPLGLATAAALAPIVYGAMISVEMRQWITGAWPYVAALWLIVL
                     LTWVLAARAPTDRPLSVAGVTLLAVAYAGALPVFLLAIRHAQHSLRSWSGAWLVFFPL
                     VVTWVCDTAAMFGGRALGGPKLAPRVSPGKTRSGSTAGVIGGLLVAPVFGALVFPHVG
                     VEVPLWHLLVIAGVLSIVGQVGDLTESLFKREAGVKDSSALIPGHGGVLDRFDSLYFV
                     IPTAAALYHLFGVI"
     gene            complement(2938..3681)
                     /locus_tag="VFD73_19930"
     CDS             complement(2938..3681)
                     /locus_tag="VFD73_19930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HZI76245.1"
                     /translation="MSADLLQRLRVHGAVPGHIAIIMDGNGRWAKGRSLPRPLGHHAG
                     MKAVREVVEGCLQAGVGVLTLFAFSQENWKRPAGEIEALMKLLEEYIAREASELRQQG
                     VSVRVLGHLDQLGDGARRAVERIMAETAGGDALALNLCISYSARAEIARAARMLAEAV
                     AAGRLTAAEIDEHAVGRMLYTAEWPDPDLLIRTSGEMRISNFLLWQLAYAELYVTPVL
                     WPDFTRRHLFEAILEFQRRERRFGRVEAG"
     gene            complement(3686..>3901)
                     /locus_tag="VFD73_19935"
     CDS             complement(3686..>3901)
                     /locus_tag="VFD73_19935"
                     /inference="COORDINATES: protein motif:HMM:NF013891.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-recycling factor"
                     /protein_id="HZI76246.1"
                     /translation="DLVKVVHKLGEEGRIAVRHARTETLSKVKKLEKISEDDKRHAEK
                     DIQKLTDEHIKQIDGLIHSKEAEILEV"
BASE COUNT          724 a         1312 c         1202 g          663 t
ORIGIN      
        1 gtcgagaaaa ggcttcaggg tgaacggcag aatgtgatca gcccctcggg ccacgctgat
       61 ggtcagactg tggccggcgc tccgctggac cacgtcgagc aagtcgtacc attggcggac
      121 cggccggccg ttgaccgcga ccaccgtgtc gcccttctgg ataccggctg ctgctgccgg
      181 ctttcccgga agcaccgtat cgatcaccgg cagacgatac ggctgcagcg cttggccggc
      241 ccggatacgc tcatccagtg catccggatg gatacgcagc accaccgtgc tgccgcctgc
      301 caggtcgatt cggatggtgg gttggggagc attggtgatg ccgttgacga tcgcgtccca
      361 cgaggtgacc gtatcgccat tgatccggac gattcgggag ccgggctgaa tttgcagcag
      421 cggttcggcc tctttcggga gctggtatgt ctcgacgtgg ccgacggtgg tgaccgggtc
      481 gatttgacgg ccgttgctat acgccaggcc ggagaacacg agccaggcaa agagcgcgtt
      541 catggtgacc cctgccagga tcacgatcat ccgcttccag atcggctgcg cttcgaacat
      601 ccggtcggcc ggaacctgga cggcgggtgc gccgccttcc agggcgctgc tccctacatc
      661 ctcctcccgg ctcgccatct tgacgtagcc acccaagggc aaccaggaga tggaatattc
      721 ggtctcgcct cggcggaagg tgagccaggg aatcggtgct ccgaggccga gtgaaaaccg
      781 gtgcacgtag atgccggccc acttggcggc cacaaagtgc cccgcctcgt gcacgaagat
      841 gagcactccc agcacgatga tcagagcaag gacattgatc agcacgtttg cctcaaagtt
      901 tggcctgcct tgtcccgcgc ccacgcatcg gcccagcgta ccgcttcgat tgaattggcc
      961 gggaccggag agtgagcgct cagggtctcg gcgatgatct cgctgatccg accgaagggg
     1021 atgccgcctc tgagaaaagc ggcgacggcg acttcgttgg cggcgttgaa gacagcgggt
     1081 gcggtgccac cggcccgccc ggctgatagg ccggacccga gcgcggaaaa cacatcgctg
     1141 cgcactggct cgaacgtcag cgggcccgcg gagaccggat cgaaccggcg aacaccgctg
     1201 tcgggaagcc gctcagggtg cgtcagcgca tagagaatgg gtagctccat gctggggaac
     1261 ccgagctgag caagaacact tccgtcctgg aactcgacga aggcgtgaat gatgctttgc
     1321 gggtgaacga ccacttccag atcgctgtac ggcagcccga acaggtaatg cgcctcgatc
     1381 agctcgaggg ctttgttggc cagcgtggcg caatccacgg tgattttggc acccatccgc
     1441 caggtgggat gctgcaatgc ctcttctaca gtggcatgcc agacccgctc cggctcccat
     1501 tcccgaaacg gtccaccaga ggcggtgagg atcagccgcg cgagtccgtc gtcccgcccg
     1561 gtgatgcact ggagcacggc gctgtgttcc gagtcgatcg gaacgatctg gccgcctccg
     1621 gcgcacgcgg cttgcgccac gagctcaccc gccatgacca gcgtttcctt gttcgccagc
     1681 gcgactcgct tgccggcccg aagcgcggcc aaggtcgcct ccagtcctgc tgcgccgaca
     1741 acggcattca ccacgatgtc ggcatcggga tgggtcgccg cgttgaccag gacctctgcc
     1801 ccactgggcc agcggccgtc gcccagaaca ccggccagcc cggcatatgc cggtcgccat
     1861 tccgccacct gcgcttccag ctcatcgcgg ttacacccgg cggtcagggc caccaggcgg
     1921 aagtgctccg gctggcgacg gagtacgtcc agggtacttc gaccgatcga tccggtcgag
     1981 ccgagcagcg cgattcccct ctgccggccg ccggagggct gctgcaccgg acccggtgct
     2041 tgcgcgatct cgactgagga ccgggccatc agattacccc gaacaggtga tacagcgctg
     2101 ccgcagtggg aatcacgaag tacagtgaat cgaaacgatc cagcacgcca ccgtgacccg
     2161 ggatcaacgc gctggagtcc ttgacccctg cttcacgctt gaacagtgac tcggtcaagt
     2221 ctcccacctg cccgacgatc gagagcacgc cggcgatcac cagcaaatgc catagcggga
     2281 cctcgactcc cacgtgggga aataccaggg cgccaaacac cggggcgacg agcagtccgc
     2341 caatcactcc cgcggtgctg ccggagcgcg tctttccggg actcacccgg ggtgccaact
     2401 tcggcccgcc cagagcccgt cctccgaaca tcgcggcggt gtcgcacacc caggtcacca
     2461 ccagcggaaa gaacacgagc caggctccgc tccacgatcg aagcgaatgc tgggcatgac
     2521 ggatggccag cagaaacacc gggagcgctc cggcgtaggc gaccgccagc agcgtcactc
     2581 ccgcaaccga taatggacgg tcggtcggag cccgggcagc caacacccag gtcaacagta
     2641 cgatcagcca gagcgcggcc acatagggcc acgcaccggt gatccattgc cgcatctcga
     2701 ccgagatcat ggcgccgtat acgatcggtg ccagtgccgc ggcggttgcg agacccagcg
     2761 gccggagtgg ttgcactcct tgcctcgctg ccaaatcgaa caattcacga gccccaagta
     2821 ccgccgcgat ggcgagcacg atggccagcg gaatgccacc ataccagacg agtgccagag
     2881 cgagcgggat ggcgatgacc gcgaacagca ctcgccggat caagttgccg tcggcgctca
     2941 tcctgcttcg acgcgaccga atcgacgttc gcgccgctgg aattccagaa tggcttcaaa
     3001 gaggtgccgg cgggtaaagt ccggccacaa cacgggcgtg acatacagct ctgcgtaggc
     3061 cagctgccac agaagaaagt tggagatccg catttcgccg gaggtacgaa tcagcagatc
     3121 cgggtcaggc cattccgcgg tgtacagcat ccgccccacc gcgtgctcgt cgatctccgc
     3181 cgcggtcagc cgtccggcag cgacggcctc agccagcatc cgggcggctc gggcaatctc
     3241 ggcgcgggca ctataggaaa tgcaaaggtt gagcgcgagc gcgtcaccac cggcggtttc
     3301 ggccatgatc cgttcgaccg ctcgccgtgc cccatctccc agctgatcca gatggccgag
     3361 gacccgtacc gacacccctt gctgccggag ctcgctcgcc tcgcgggcga tatactcctc
     3421 cagcagtttc atcagcgcct cgatctctcc ggcgggccgc ttccagttct cctggctgaa
     3481 tgcgaagagc gtcagtactc ccacgcccgc ttgcagacaa ccctcaacca cctcacgcac
     3541 cgccttcatt cccgcgtggt gtcccagcgg acgcggcagc gagcgaccct tggcccagcg
     3601 gccgttcccg tccatgatga tcgcaatgtg gccgggaacg gctccatgga cccgtagtcg
     3661 ctgcagcagg tcggcgctca tggtgtcaga cttccagaat ctccgcttcc ttcgagtgaa
     3721 tcaggccgtc gatctgcttg atgtgctcgt cggtgagctt ctgaatgtcc ttttccgcgt
     3781 ggcgcttgtc gtcttccgag attttttcca gcttcttgac ctttgagagt gtttccgttc
     3841 tcgcgtgccg gaccgcgatg cgaccctcct cgcccagctt gtgaaccacc ttgaccagat
     3901 c
//
LOCUS       DASRPQ010001754         1039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_213510, whole genome shotgun sequence.
ACCESSION   DASRPQ010001754 DASRPQ010000000
VERSION     DASRPQ010001754.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213510"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..125
                     /locus_tag="VFD73_19940"
     rRNA            <1..125
                     /locus_tag="VFD73_19940"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            473..>1039
                     /locus_tag="VFD73_19945"
     rRNA            473..>1039
                     /locus_tag="VFD73_19945"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          221 a          300 c          353 g          165 t
ORIGIN      
        1 gcaagcaaca cccgaagccg gtggcctaac cctttgggag ggagccgtcg aaggtggggc
       61 tcgtgactgg ggtgaagtcg taacaaggta gccgtaccgg aaggtgcggc tggatcacct
      121 cctttctagg gagctccagg agtggagcgc cggttcttgc cggcggcgca taccgcgccg
      181 ctcgagctcg gccggttcta gagacgtcga ccggacctgg cgcccagcgg cccgccgctc
      241 cctcacgggg gcagtgaggc cacgccgacc cgcacgcggc cactgctccg caggcggcga
      301 ggcggggtgc atgctgttga gttttgagag accgagcgcc ccagtccggg gcgcgcgcct
      361 ctttgcggac cttgaaaact gcacaaccat gccaactggc agctgatcgc gacgatcggc
      421 tgccaaccaa acgggtatca ccgggcgctt cgttcgcgaa gtgcctgatc accgtcaaga
      481 taggaagggc acatggtgga tgccttggca ccaggagtcg aagaagggcg tgaacggctg
      541 cgataagccg cggttaggcg ctgaatagcc attgacccgc ggattcccga atggggaaac
      601 ccagcgctgg taatacggcg ttaccccccg ctgaatacat aggcgggtgg gaggcaagcg
      661 agggaactga aacatctcag tacctcgagg aaaggaaatc aaccgagact ccccgagtag
      721 tggcgagcga aaggggatcc agcccaaacc tggtcggtgc aagcgcgcac gcgttgccgg
      781 ccgggggttg tagggcactc tgtccaggct gtgcgtggcc tggcggcagt taccaagttc
      841 agcgatagac gaagcacgtg gaaccgtgca ccacagaggg caaccgtccc gtagtcgaaa
      901 tcgttgagcc tgtcgataag cgttcctgag taggtccgct cccgtgaaac gcggactgaa
      961 tctgggggga ccaccctcca aggctaagta ctccctggtg accgatagcg gactagtacc
     1021 gtgagggaaa ggtgaaaag
//
LOCUS       DASRPQ010001755         1668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_515124, whole genome shotgun sequence.
ACCESSION   DASRPQ010001755 DASRPQ010000000
VERSION     DASRPQ010001755.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_515124"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..229
                     /locus_tag="VFD73_19950"
     CDS             <1..229
                     /locus_tag="VFD73_19950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76247.1"
                     /translation="TLSLSTRTGSADNQSVPGELPGSRQRAADHLDNGTRRRERATGT
                     DRRARTFGSPDDFPIYRHRYGGLASSNVGAD"
     gene            complement(254..>1668)
                     /locus_tag="VFD73_19955"
     CDS             complement(254..>1668)
                     /locus_tag="VFD73_19955"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HZI76248.1"
                     /translation="ARHQRSATDYFLGARDLPAWAILLSIVATETSAITVISVPGIGA
                     RGDLTFLQLTFGYLVGRIGVARWLLPGYFRGDQETAYARLQSRFGVGTRRLTSTVFLV
                     TRFLGDAVRVFASAIPLALVAGWSIPTSIVVMGIITMVYTWLGGFKAVVWTDVLQLSV
                     YLAGGIGALLVALSLAGGPDVAFTAAHSAGKLKLINPGIDFTKTYTLLGGILGGALLS
                     AASHGTDHLIVQRLLATRSLRDARIALVGSGIMVIFQFALFLLVGVAIWAAGLAPEHV
                     SSDQLFPSFIVHHLPTGLAGLVVAGILAAAMGTHSSAINSLASSATHDLYASWTGRQD
                     PVHLLRVGRILSVIWAAGLIGGALFFHAVATGNDTPVVVLALSIASVTYGSLLGTYVL
                     AGRWPRARGRDVVGAVATTVAVMLVVVFASRLASHAPFHWLAPVGRLAWPWYVPLGTL
                     ICVGVGIGLSYLPHARESTR"
BASE COUNT          367 a          530 c          529 g          242 t
ORIGIN      
        1 cacgctcagt ctctcgaccc gcaccggcag cgccgacaac cagagtgtcc ccggtgagct
       61 tcccggcagc cgacagcgcg cggcggacca cctcgacaat ggtactcgac gacgcgagcg
      121 cgcgaccggg acggaccgcc gcgccaggac cttcggctcg cccgacgatt tccccatcta
      181 tcgacaccgc tacggcggtc ttgcttcctc caacgtcggc gccgactaag gttctgggca
      241 ttttagtgag ttcctacctc gtggactccc gagcatgcgg aaggtagctg aggcctatcc
      301 ccacgccgac gcagatcaga gtccccagcg gcacgtacca gggccaggcg agcctcccga
      361 cgggagccag ccagtggaac ggcgcgtgtg acgcgagtcg cgaggcaaac acgaccacca
      421 gcatgacggc gacggtggtc gccacggcgc ccaccacatc tctgcctctg gcccggggcc
      481 agcggcccgc cagaacatag gtccctagaa gcgatccgta agtgaccgac gcgatcgaga
      541 gggccagcac gacaacagga gtgtcgttcc ccgttgctac ggcgtgaaag aacagggcgc
      601 ccccgatcag gccggcagcc catatgaccg acagaatgcg tccaacccgg agcaaatgaa
      661 ccggatcttg gcggccggtc caggacgcgt agagatcgtg agttgcagac gaagccagcg
      721 agttgatggc agagctgtga gtacccattg ccgctgcgag aataccggcg acgaccaacc
      781 cggcaaggcc ggttggaaga tgatgcacga taaatgaggg aaacagttga tcgctggaga
      841 cgtgctccgg cgccaggccg gctgcccaaa ttgccacgcc gaccagcagg aacagcgcga
      901 actgaaatat caccatgatg ccggaaccga ccaacgcgat cctggcgtct cgcaatgacc
      961 gggtggcgag caggcgttgg acgatgaggt gatccgtccc gtgggaagcg gcagacaaaa
     1021 gcgctccacc gaggatgcca ccgagcaggg tgtaggtctt ggtgaagtct atgcccgggt
     1081 tgatcagctt cagctttccc gcgctgtgag ccgccgtgaa cgccacgtcg ggccctccag
     1141 cgagtgagag tgccaccagc agcgctccga tcccaccagc gagatagacc gacagttgga
     1201 gcacgtcagt ccacaccact gctttgaacc ccccgagcca ggtgtagacc atcgtgatga
     1261 tccccatgac gacgatcgac gtgggtatgc tccagccggc cacaagcgcg agtgggatgg
     1321 cgctggcaaa tactctcacc gcatcgccca aaaagcgggt aaccagaaac acggtcgacg
     1381 tcagccgccg ggttcctacc ccaaatctgg attgcagtct cgcgtaggcg gtttcctggt
     1441 cgccccggaa atatccgggg agcagccagc gggccactcc gatacggccg acgaggtaac
     1501 caaaggtgag ctggaggaag gtgagatccc ctctcgcacc gattccgggc accgagatga
     1561 cggtgatggc agaggtctcg gtagcgacaa tagaaagcag aatggcccag gcgggaagat
     1621 cgcgggcgcc gagaaagtag tcggttgcgc tgcgctgatg gcgggcaa
//
LOCUS       DASRPQ010001756         1106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_515171, whole genome shotgun sequence.
ACCESSION   DASRPQ010001756 DASRPQ010000000
VERSION     DASRPQ010001756.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_515171"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1106
                     /gene="ltrA"
                     /locus_tag="VFD73_19960"
     CDS             <1..>1106
                     /gene="ltrA"
                     /locus_tag="VFD73_19960"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZI76249.1"
                     /translation="MKSPNKTGEPAAEVMERRAGAEENASQHRTRRAQNRESVSQVLE
                     RVREAARLRKKERFTALCHHITVDLLRLSFLALKRDAAPGADGVTWQDYEADLERKLG
                     ELHAKIHRGAYRPQPSRHRYIPKADGRQRPLAVAALEDKIVQRATAAVLNQIYEEDFL
                     GFSYGFRPGRSQHDALDALMVGIRETKGVSWIIDADIQSFFDTVSHEWLIRFLEHRVG
                     DRRIIRLIRKWLRAGVLEDGSVTVSKTGTGQGSVISPLLANVYLHYVFDLWAARWRRR
                     EATGTMIITRYADDLVIGFERQADAHRFLEMMRKRFEEFALSLHPEKTRLIEFGRYAV
                     HNRKQRGLGKPETFNFLGFTLICSRTRRGAFQLK"
BASE COUNT          235 a          320 c          367 g          184 t
ORIGIN      
        1 gatgaagtcg ccgaacaaaa ccggggaacc ggcagcggag gtgatggagc gaagggcggg
       61 ggccgaggag aacgcgagcc agcaccgcac gcgccgggcg cagaaccggg aaagcgtgtc
      121 acaggtgctg gagcgcgtac gggaagccgc aaggctacgg aagaaggaac ggttcaccgc
      181 gctctgccac cacatcacgg ttgatctgct gcggctgtcg tttttggctc tcaagcgaga
      241 cgcggcacct ggtgcggacg gcgtgacatg gcaggactac gaggcagacc ttgagcgcaa
      301 actcggggaa ttacatgcca agatccatcg gggagcatac cggccgcagc catcccggca
      361 tcggtatata ccgaaagccg acggacggca gcggccactc gccgtggcgg cgcttgagga
      421 caagatcgtc caaagagcaa ccgccgccgt actgaaccag atctatgagg aagacttcct
      481 cgggttctcg tacggtttcc ggcccgggcg cagccagcac gatgcgctgg atgccctgat
      541 ggtcggaata cgcgaaacaa agggggtgag ctggatcatc gacgccgaca ttcaaagctt
      601 cttcgacacg gttagccacg aatggctgat ccgtttcctg gagcaccggg tcggcgatcg
      661 acgcatcatc cgcctgatcc ggaaatggct cagagcgggg gtgctcgaag acgggtcggt
      721 tacggtcagt aagacgggaa ccgggcaggg gtcggtgatc tcaccgctgc ttgccaacgt
      781 ttacctgcac tatgtcttcg atctttgggc cgcccgctgg cgacggcggg aggccaccgg
      841 caccatgatc atcacgcgct atgcggatga tctggtgatc gggttcgagc gccaggccga
      901 tgcgcatcgg ttcctcgaaa tgatgcggaa gaggtttgag gagttcgcgc tgtcactcca
      961 ccctgagaag acccggctga tcgagttcgg ccgctacgcg gtgcacaacc gcaagcagcg
     1021 cggtctcggt aagccggaga ccttcaattt cctgggattt acactgatct gcagccgaac
     1081 ccgccggggg gctttccagc tcaaac
//
LOCUS       DASRPQ010001757         1900 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3374419, whole genome shotgun sequence.
ACCESSION   DASRPQ010001757 DASRPQ010000000
VERSION     DASRPQ010001757.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3374419"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..444)
                     /locus_tag="VFD73_19965"
     CDS             complement(<1..444)
                     /locus_tag="VFD73_19965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76250.1"
                     /translation="MRTIFLVSIAVGMASLTGCGSERQVSARPSVPKRDLTLGLAAPE
                     VEVASPVELNRPEPQQARISIRRTRRHATTFQPTIVPAVLKSTVSPAAPVVAAPQPAA
                     SQPATPVALPTDSHELPPGKTITIIPASTSSSGGSDPAVEPSTARG"
     gene            584..925
                     /locus_tag="VFD73_19970"
     CDS             584..925
                     /locus_tag="VFD73_19970"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HZI76251.1"
                     /translation="MASIYREIRIDAPPELVWDALRDVGALHRRLARGFVTDVRLEEG
                     ARVVTLANGIVARELIVAATTTLQPRCFRTAEMEAGSCGSPTCCVAISAMMDQGLVAI
                     RRTLEDGRSAG"
     gene            1115..>1900
                     /gene="solA"
                     /locus_tag="VFD73_19975"
     CDS             1115..>1900
                     /gene="solA"
                     /locus_tag="VFD73_19975"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: protein motif:HMM:NF008425.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050131 - N-methyl-L-amino-acid oxidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HZI76252.1"
                     /translation="MTGSYDAIVLGLGGMGSAALYHLAGRGLRVLGLERFDLIHEHGS
                     SHGLTRIIRLAYAEHPSYVALLHRSYQLWRELERQAREQLLFITGSIDAGPADGQIFP
                     GALKSSELHGLPHEVLNGAELHRRFPGYRLPATTQCLYQPDGGYLLPERCNLSHIGVA
                     LSRGAQIRCREAVLEWGVGGAGVRVRTTQNRYEAGALVICGGAWAGQLVPELAGLAVP
                     ERQVLGWFQPNRPERFLPETFPVFNLEVDEGRYYGLPSVLVPGF"
BASE COUNT          325 a          565 c          644 g          366 t
ORIGIN      
        1 gcctctggcg gtactgggct caacagccgg gtccgagccg ccggatgaac tggtgctcgc
       61 cggaatgatg gtgatggttt tccctggcgg aagctcgtgc gaatcggtcg gcagcgctac
      121 gggagttgcc ggctgcgacg ctgctggctg gggcgcggca acgaccggag cagccggaga
      181 aaccgtcgac ttcaaaacgg cgggtacgat cgtgggctgg aacgtcgtcg cgtggcggcg
      241 cgtgcgccga atggagattc gtgcttgctg gggctcggga cggttcagct caactgggga
      301 ggcaacttct acttcaggcg ctgcaaggcc aagggtaagg tcgcgctttg gaacggatgg
      361 gcgggcggac acctggcgtt cagatccaca tcctgtcaga ctcgccatcc ccacagcgat
      421 cgagaccaga aaaatcgtac gcatgacccc tcccggttcc cgcaattcgt cgatggtgcg
      481 aagataggac gattcggctg cgatcacaaa cacttggttc agtcttcggc ggcacgattc
      541 gacctgcgac gtttccgcgt ttctgccagc gagcacagcg ctggtggctt ccatctaccg
      601 ggaaatcagg atcgacgctc ctccggagct agtgtgggat gctctgcgcg acgtcggtgc
      661 cctccatcgg cgactcgccc gcggattcgt gaccgacgtc cggctggagg aaggcgcccg
      721 ggtggtgacg ctcgcaaacg gaatcgtggc ccgggagctg attgtcgctg ccaccacaac
      781 gcttcagcct aggtgtttcc ggacagcgga gatggaagca ggttcgtgtg gatcgcccac
      841 ctgctgcgtg gcgatctcgg cgatgatgga ccaggggctt gtggccatca ggcgcacgct
      901 cgaagacggt cggagtgcag gctgagccag tgtcccagtt cgggcgcaaa ttcaggcagg
      961 aactcgcttg gtgccgtcac cgggatcagc agtttggcca acaccgaggg aatgaagatc
     1021 gtgggtttca tggtgctctc cgtggctgaa tgatcgctcc atatctaagt cgaacgagag
     1081 ctacccaaat cgacatctca gcgagagagc gcctctgacc ggcagctacg atgcgatcgt
     1141 cctcgggctt ggcgggatgg ggagcgccgc gctgtatcat ctcgccggcc ggggacttcg
     1201 cgtactaggg ctggaacgat ttgatctgat tcacgagcat ggctcctccc acggactcac
     1261 cagaatcatc cggttggcct atgccgagca cccgagctac gtcgcgctgc tccaccgatc
     1321 ctaccagctc tggcgggagt tggagcgcca ggcgcgggag cagctgctgt tcatcaccgg
     1381 gagcatcgat gcgggtcccg cggacgggca gatctttccg ggagctttga agtcgagcga
     1441 gctccacggc ctgccgcacg aagtgctgaa tggcgccgag ctgcatcgac gttttccggg
     1501 ataccgcctc cccgccacga ctcagtgcct ctaccagccc gatggtggat acctgctgcc
     1561 ggagcggtgc aacctgtccc acatcggcgt tgccctgagt cgcggagccc agattcgctg
     1621 ccgtgaggct gttctggaat ggggtgttgg cggggcaggg gtccgcgttc ggaccactca
     1681 aaaccgctat gaggctgggg cgctggtgat ttgcggcgga gcgtgggcag gacagttggt
     1741 tccggagcta gccggtctcg cggttcccga gcggcaggtg ctcggctggt tccagccgaa
     1801 ccggccggag cgcttccttc ccgagacctt cccggtcttc aacctcgagg tggacgaggg
     1861 tcgttattat ggtctcccga gcgtgctggt gcccggcttc
//
LOCUS       DASRPQ010001758         1060 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2113470, whole genome shotgun sequence.
ACCESSION   DASRPQ010001758 DASRPQ010000000
VERSION     DASRPQ010001758.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2113470"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            92..>1060
                     /locus_tag="VFD73_19980"
     CDS             92..>1060
                     /locus_tag="VFD73_19980"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HZI76253.1"
                     /translation="MVSVVSDDPQLHRLSWEVLCELHREDLLVPAGVPITEAGRKDIC
                     IIDWPPKQTIPEPFRTTQHGRCLYLVERDQVEKITASLPRSLAGVLVKPVNRNALKFS
                     LEQAIGSAEADLESRELPPAGSDRDDILQCLLIAYLRLQEHDRDRMNFLSRAVHDFRA
                     PLTAVNGYCGLFLEGLLGPLAPAQKEVLQRIQQSARRLSRLAIAMHELTTRGQGRPGP
                     DLAAYSIEDSVAQAVHEIRPGCDERGVSIVVQLAESPEPLYFDAVQIEQVLVNLLDNA
                     GRFAKKHGIIEVSGYPYRLDRLDDAGYNGSDRSRGLDPNCYRVDVKD"
BASE COUNT          208 a          304 c          348 g          200 t
ORIGIN      
        1 attaaagaca aaaatgcctg aataaccgca aaattgtagg tcgaattgtg gagtttctca
       61 tcgacttggg cttttacgga ggaacgagcc attggtcagc gtcgtttcgg atgatccgca
      121 gcttcacagg ttgagctggg aggtcctttg cgagttgcat cgggaggatc tactggtacc
      181 ggccggggtc cccatcacgg aagccgggcg taaggacatt tgtattatcg actggccgcc
      241 gaaacagacg atccccgagc cattccgcac gacacagcac gggcgctgcc tgtacctggt
      301 cgagcgggac caggtggaga agatcaccgc cagcctgcct cgctcgctgg ccggtgtgct
      361 tgtgaagccg gtgaatcgga acgcgctcaa attctccctg gaacaggcaa tcggatcggc
      421 tgaagcggat ctggaatcca gggagctgcc gccggcgggc tcggaccggg acgacatcct
      481 gcagtgtcta ctgatcgctt acctgcgcct gcaggagcac gatcgcgacc gcatgaattt
      541 cctatcgagg gcggttcacg attttcgcgc gcccctgacg gcagtgaatg gatattgcgg
      601 gctttttctg gaagggctgc tgggtccgct ggctccggcg cagaaagagg ttctgcagag
      661 aatccagcag agcgcgcggc ggctctcccg gctggccatt gcgatgcacg aactgaccac
      721 ccgggggcag ggaaggccgg gtccggacct ggcggcgtat tcgatcgagg acagcgtggc
      781 gcaggcggtt cacgagatcc gccccggctg cgacgagcgg ggcgtctcga ttgtcgtgca
      841 actcgcggag tcgccggaac cgctgtattt cgacgccgtg cagatcgaac aggtgctggt
      901 caaccttctg gacaacgccg gccggttcgc caagaagcac gggatcatcg aggtgagcgg
      961 ctacccttac cggctggacc gcctggacga tgccggctat aacggctccg accggagccg
     1021 tgggctcgat ccgaattgct accgcgtcga tgtcaaagac
//
LOCUS       DASRPQ010001759         1240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1799525, whole genome shotgun sequence.
ACCESSION   DASRPQ010001759 DASRPQ010000000
VERSION     DASRPQ010001759.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1799525"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..1213
                     /locus_tag="VFD73_19985"
                     /pseudo
     CDS             129..1213
                     /locus_tag="VFD73_19985"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
BASE COUNT          199 a          374 c          439 g          228 t
ORIGIN      
        1 ctccagcgga gagtctgcaa accatcggtc cctgccggcg ggttcgcacc gcatctgcgc
       61 ggtggaagcg cgcccgctgt gggagcgggc cggatcgatc agagatcggc ttgcaggtag
      121 tggcctatgt ggatagcaaa caagtcgtcg atgtctgggg tggcctcgcc gatataatca
      181 ctgggaggca ggtcgatgct gacacactct ttccggtgtt ctccgtcacc aaggcggtga
      241 cggcagtggc gttgcacatc caggcggagc gcgggctggt ggattacgct atgcccatcg
      301 cccactattg gcctgaattc ggcgcgcacg ggaaagacaa ggcgacggtg tatgacgccc
      361 tcacgcaccg gctcggggtt cccatcatgc gcttgggggt gaccccggag ttgatgtgcg
      421 actgggactg gatggtgcag cgcatcgccg acatgcatcc gttgtttgag ccggggacca
      481 aggcggccta catgtcgtat acttttgggc gggtcatcgg cgaagtagtg cagcgcaccg
      541 atccgcgcag caggcagttt ggcaccttca tccaggagga atctgtcagc cactgggcct
      601 cgacagcctc tgggtgggca tcccggatgc ggtcgaagcg cgggtggcca cccttaccaa
      661 tatgccgccg atccctccgg gcgcgcctgg gatggcccct ggagcgctca gccccctggc
      721 gattccgccg caggtgggga cgacccagga ggtgtttgga cgggctgacg tgcggcgggc
      781 ctgtctgccg ggcgccggcg gcatcatgaa cgcgcgcagc gccgcgcggt tcttcgccat
      841 gcttgcccaa ggtggggcgc tggatggggt gcgcctcctg tcggaggagc gggtgcgctg
      901 gtccagcgta ccgcgtccgc cttgtgatta tgactacgtg caaggcgtgc cccacaacgg
      961 cagcatcggt ggcttccacc tcgtggcgag tattggcgat gcggccccac ccctgtcgat
     1021 ggtcgcggcg gggaggaacc cgcggacctt tggccatccc ggtgcagggg gatcgatcgg
     1081 gtgggcggat cccgattccc gactggcggt cgccgtgacc cacaaccgga tgttccgcgc
     1141 caccacccct gaggagaacc cctttgttcc gattggcgag gcggtgcgag aggccctggg
     1201 ggtttctggt taagcgtcgt aacagaaaga gagagaccat
//
LOCUS       DASRPQ010001760         1650 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1799720, whole genome shotgun sequence.
ACCESSION   DASRPQ010001760 DASRPQ010000000
VERSION     DASRPQ010001760.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1650
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1799720"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..345
                     /locus_tag="VFD73_19990"
     CDS             <1..345
                     /locus_tag="VFD73_19990"
                     /inference="COORDINATES: protein motif:HMM:NF019127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1259 domain-containing protein"
                     /protein_id="HZI76254.1"
                     /translation="NGGVYQVSVARAEKITEGGMEVPPAMGVATALNFQPTGGKRAAI
                     TGDFVLIASEVNPVIKTLRQNGIQVTALHSHMLDELPRLFFMHFWANDDAAKLARGLR
                     AALDQMNVKRAS"
     gene            361..1407
                     /locus_tag="VFD73_19995"
     CDS             361..1407
                     /locus_tag="VFD73_19995"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HZI76255.1"
                     /translation="MRHQGIVCALLAALLFGASTPVAKGLLADVSPQVLAGLLYLGSG
                     LGLGVLWWFRRSARIAAEARLTSSDIPWLLGAVGLGGVLGPLLLLIGLSHTPASAASL
                     LLNLEGVLTALLAWIVFRENVSQRIGLGMVVIVAGGALLGYQGQLEWGGLAGTLAIAG
                     ACLCWAIDNNLTQKVSGSDPIQIAALKGSVAGGINLTIGLLLAGSLPEKFQVAGALAL
                     GFVGYGVSLVLFVVALRSLGTARTGAYFSTAPFVGAVLSLLIWREPVTASLIAAGSLM
                     ALGVWLHLTEWHAHEHVHQPLSHSHRHTHDAHHQHPHRPGDPPGEPHTHVHVHPRLVH
                     SHPHYPDIHHRHVH"
     gene            1468..>1650
                     /locus_tag="VFD73_20000"
     CDS             1468..>1650
                     /locus_tag="VFD73_20000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76256.1"
                     /translation="MLTFSRLGPMVQAVLPPKKASLANAPASTGNRLGGERIRAPFPH
                     SSPGALSARSRPIVPLE"
BASE COUNT          288 a          520 c          503 g          339 t
ORIGIN      
        1 aacggcggcg tctaccaggt gagcgttgcg cgcgccgaaa agatcactga aggcgggatg
       61 gaagtgcctc cagcgatggg tgtggcaacg gcgctcaact tccagccgac cggagggaag
      121 cgagctgcta ttaccggtga cttcgttctg atcgccagtg aggtcaatcc ggtcatcaag
      181 acgctcagac agaacggcat ccaggtgacg gcgttgcaca gccatatgct ggacgagttg
      241 ccccggctct tcttcatgca tttctgggcc aacgacgatg ctgcgaagct agccaggggg
      301 cttcgggcgg cgctcgacca gatgaacgtg aagcgagcga gctgacagca agtgagtcaa
      361 gtgcggcacc aaggtatagt ttgtgcgctg ctggccgcgc tcttgtttgg tgccagcacc
      421 ccggtagcaa aagggctgct ggccgatgtt tcacctcagg tgttggcggg cctgctgtat
      481 ctcggctctg gactcggact cggcgtactc tggtggtttc ggcggagtgc caggatagca
      541 gcagaggcaa ggctcacctc gagcgacatc ccctggctcc tcggcgcggt cggcctcggc
      601 ggggttctcg gaccgctcct cctgctgatc ggactttcgc acaccccagc ctctgccgcg
      661 tccctgctcc tcaatctgga aggcgtactc accgccctgc tcgcctggat tgtctttcga
      721 gagaatgtca gccagagaat cggattggga atggtggtaa tcgtcgccgg cggtgcactg
      781 ctgggctacc aagggcaact cgaatggggt ggtctggccg gcactctggc catcgccggg
      841 gcgtgcctct gctgggcgat agataacaac ctcacccaga aggtctccgg cagcgatcca
      901 atccagatcg cggcactgaa gggtagtgtg gccggaggca taaacctgac aatcggcctt
      961 ctgctggcgg gctcgctgcc cgaaaaattc caggtggcgg gagcactcgc gctcgggttc
     1021 gtcggctacg gtgtcagcct tgtgctcttc gtggttgctc tcagaagtct cggtacggcc
     1081 cgcaccggcg catatttttc taccgctcca ttcgttggtg cagtgttgtc cctgctcatc
     1141 tggcgagagc ctgttacagc gagcctcatt gcggccggga gtctcatggc actcggcgtc
     1201 tggcttcacc tgaccgaatg gcacgctcac gagcacgttc atcagccgct ctcccacagc
     1261 caccgtcaca cccacgatgc tcatcaccag catccccacc gtccgggcga tcctcctggg
     1321 gaaccgcaca ctcatgtaca cgttcacccc cggctggtgc atagtcaccc gcactacccc
     1381 gacattcacc accggcacgt gcattgacgg agctgcaccg aacttcttag aagttgggct
     1441 gttcctggag ctcagggaca ggttgcgttg ctcaccttct ctcgtctggg ccccatggtg
     1501 caggcagtgc ttccgccgaa gaaggccagt ctggctaatg cgccagcttc gaccggcaat
     1561 cgcctggggg gggaacggat acgagcgcct tttccgcact cctcacctgg cgcactttcc
     1621 gctcggtctc gcccgatcgt tccgctggaa
//
LOCUS       DASRPQ010001761         1338 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1799935, whole genome shotgun sequence.
ACCESSION   DASRPQ010001761 DASRPQ010000000
VERSION     DASRPQ010001761.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1338
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1799935"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..375
                     /locus_tag="VFD73_20005"
     CDS             <1..375
                     /locus_tag="VFD73_20005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76257.1"
                     /translation="RQPSPTGVLNLLRYVCTARDRHRLNLKAHRFAAAGGVAVCDHSP
                     IREDRNVMEPRIPALLPPQPGRVAVALRNIERAYYRRMVRPDVLCALELDPDPAVAHV
                     IDASLPFTDVLRQMKSFLWRAL"
     gene            376..1056
                     /locus_tag="VFD73_20010"
     CDS             376..1056
                     /locus_tag="VFD73_20010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76258.1"
                     /translation="MTSTRGTAPRLVELAGPAGVGKSTIAHALRQRCPAQQATIWGLP
                     MLPLLTNGMSLLPTLAEFWGRSRSLLWDESRHLVRLQTLQRRLANAPYQPAPIILFDE
                     GPIFALAWLRGFGHESLRSPAANAWWQNTLQLWAKMFDVVVVLEASDRLLATRIKASP
                     AWHEIKHASDEEIGIWMDRFRTALEWVLAGLSAAGGPAILRVATDEQPSYCIAELVVS
                     ALRLRDTH"
BASE COUNT          206 a          455 c          402 g          275 t
ORIGIN      
        1 cgtcagccct cacccacagg ggtgttgaac ctgctgcgat atgtctgtac cgcacgggac
       61 cggcatcgcc tcaacctgaa ggcccatcgc ttcgctgctg cgggaggagt tgctgtctgt
      121 gaccactccc cgattcggga agaccggaac gtgatggagc ctcgcatccc cgcactcctg
      181 ccgccccagc ccggccgcgt ggcggtggcg ctgcgcaaca tcgagcgcgc gtactatcgc
      241 cggatggtca ggcctgacgt cctctgcgcc ctagagctcg atcccgaccc ggccgtagct
      301 cacgtgatcg atgccagcct accctttacc gacgtccttc ggcagatgaa gtccttcctc
      361 tggcgggcgc tctagatgac ctcaacccgc ggtactgctc cccggctcgt ggagctcgcc
      421 ggcccggccg gcgttggcaa gagcaccatc gcccatgccc tgcgtcagcg ctgcccagcc
      481 cagcaagcga caatctgggg acttcccatg ctgccgctcc tgactaatgg aatgtccctg
      541 ctacccacac tcgccgaatt ctggggacga tcgcgctcgc tgctctggga tgaatcacgc
      601 cacttggtgc ggctgcagac gctgcagcgg aggcttgcga acgcacccta tcagccggcg
      661 ccgatcatcc tctttgacga ggggccgatc tttgctttag cctggctgcg cgggtttggc
      721 cacgaaagct tgcgtagtcc ggcggcgaac gcctggtggc agaataccct ccagttgtgg
      781 gccaagatgt tcgacgtcgt ggtcgtgttg gaagcatccg atcgcctgct cgcgacccgc
      841 atcaaggcca gccccgcctg gcatgagatc aagcacgctt cggacgaaga gatcggaatc
      901 tggatggatc gtttccgcac ggcgctcgag tgggtcctgg cgggtctctc ggcggctggt
      961 ggtcccgcga tcctccgtgt ggccacggat gagcagccat cgtattgtat cgctgaactg
     1021 gtcgtttccg ctctgcggct ccgcgacact cattgagttg aggcagcgag cttcatcgct
     1081 gctgccagcg caggcggacc atctcggccc gtgtaccgga ggctcgtgcc ggcagcgctc
     1141 tggttgcgtc gcttcgattt tccccgtttg tttcggagat gcaggacgtc tccctgatca
     1201 tcaatcccat agagctcgac gcggcactcc tccaggcaac gatcacggcg gcgcttgccg
     1261 cactctgcgc ctttctcttt gctcggtacc gcaaaccgta ctttgcctgg tgggccggag
     1321 cctggggcct ctatctcc
//
LOCUS       DASRPQ010001762         1300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1479794, whole genome shotgun sequence.
ACCESSION   DASRPQ010001762 DASRPQ010000000
VERSION     DASRPQ010001762.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1479794"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1300
                     /locus_tag="VFD73_20015"
     CDS             <1..>1300
                     /locus_tag="VFD73_20015"
                     /inference="COORDINATES: protein motif:HMM:NF015052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76259.1"
                     /translation="VPAPVTIGFTPVLANQLINPTFVSEMEAFFAQRLKACDEAPGSL
                     AATGDSHLLPLVDFWRNRLIRLRQLFQDTDGNIVTAFRALESAAQIEIIGSAATHGYL
                     PLLARDESIRLQLAVGVSEHRRIFGRAPAGCWLPECAYRPRGPWDPWPTAPRMGMRRG
                     IEEHLADAGFQYFFVDAHLAAAGRPLGLSGDPAGDPTVHAPAAQASPSEPLRSPYRAY
                     RVAHGPVVAYVRDPRASMQVWSRFEGYPGDEWYLEFHKMRWPGGLKLWRVSGPQVDLG
                     AKQPYNPDAASDRARGHAEHFAYLLAGIAAGQAQNREAVVVAPFDTELFGHWWFEGPE
                     FLGDMYQALTRQPSVHPATGAGHLRDHPARAAIRLPWGSWGANGDSSMWLSDQTAWTW
                     ERLWPLEQSFWDVAHQALGQPSARPVLAQAARELLLAQSSD"
BASE COUNT          201 a          449 c          406 g          244 t
ORIGIN      
        1 gtccccgccc cggtgacgat tggcttcact ccggtgctgg ccaaccaact catcaatccg
       61 acgttcgtct ccgaaatgga ggcattcttt gcacagcgcc tgaaggcctg tgatgaagcg
      121 cctggctcgc tcgccgctac tggggacagc catcttctcc ccctcgtcga cttctggcgt
      181 aaccgcctca ttcgcctccg ccagttattc caggacacgg acggcaacat tgtcaccgcg
      241 tttcgcgccc tggaatccgc ggcgcagatc gagatcatcg gctcggccgc cactcatggt
      301 tatctgccgc ttctggcccg ggacgagagc atccggctcc aactcgccgt cggcgtctcc
      361 gaacaccgcc gcatcttcgg ccgggctccc gcaggatgct ggctcccgga gtgcgcctac
      421 cggcctcgcg gcccgtggga cccatggccc actgctcctc gcatgggtat gcgaaggggc
      481 attgaagagc acctcgccga tgccggattc cagtacttct tcgttgatgc ccatcttgcc
      541 gcggccggca ggccgctggg tctgtcgggt gatcctgccg gagacccgac ggtgcacgca
      601 cccgctgcgc aggccagtcc ttctgagccg ttgcgctcgc cgtaccgcgc gtatcgtgtc
      661 gcccatggtc cggtggtggc gtatgtacgg gatcctcgcg cgtcgatgca ggtctggagc
      721 cgattcgagg gctaccccgg cgacgagtgg tatctcgagt tccacaagat gcgctggccg
      781 ggaggactca agctctggcg agtcagtggc ccgcaagtcg atctcggagc caagcaaccg
      841 tacaacccgg acgctgcgtc cgatcgggcc cgcggccacg ccgaacactt tgcgtatctg
      901 ctcgcgggaa ttgccgcggg ccaggcgcaa aaccgggaag ccgtcgtggt ggcgccgttc
      961 gacaccgagc tctttggaca ttggtggttc gagggtcccg agttcctggg cgatatgtac
     1021 caggccctga cacggcagcc atcggttcac cctgccaccg gtgccggaca cctccgagac
     1081 catcccgctc gagcagccat ccggttgccg tggggatcct ggggcgccaa cggcgacagc
     1141 agcatgtggc tcagcgacca gacggcatgg acctgggaac gtctctggcc gctggaacaa
     1201 tcgttctggg atgtcgccca ccaggcgctc ggccaacctt cggctcggcc ggtattggcg
     1261 caggcggcgc gcgagctctt gcttgcgcaa tcctccgatt
//
LOCUS       DASRPQ010001763         1962 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_516353, whole genome shotgun sequence.
ACCESSION   DASRPQ010001763 DASRPQ010000000
VERSION     DASRPQ010001763.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1962
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_516353"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..243)
                     /locus_tag="VFD73_20020"
     CDS             complement(<1..243)
                     /locus_tag="VFD73_20020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76260.1"
                     /translation="MKSLGAALLLIVLLFRVPLVPAQAVPATDDSGIDGTGGLGSGLL
                     SSHNAVPLTQATQTCLQLPANPENGIQGPHGDSLISS"
     gene            344..1807
                     /locus_tag="VFD73_20025"
     CDS             344..1807
                     /locus_tag="VFD73_20025"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018478 - malonate-semialdehyde
                     dehydrogenase (acetylating) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HZI76261.1"
                     /translation="MTVLVSARVAKYPAARNFVGGKFAESESPRLEVLNPSDGSLLAH
                     VPLSTADELDQAVRSARRAFAGWSATPIKERVQIFFRYRDLLQRDFDDLAALISEEHG
                     KIRSEAEAEIVKAIELTEFACSLPQIAAGEVLEVSRGVECRMDRYPLGVVASIVPFNF
                     PSMVPHWTIPNAIALGNCLILKPSELVPLSAGRIAELLTEAGLPPGVFSVVHGARELV
                     EAICDHPDIFAVSFVGSTKVAKVVYRRATQNLKRALALGGAKNHLFVLPDADVELSAG
                     GILNSMSGCTGQRCMAGSVMLALAGTDAIVRRLVEQARQMVPGKDLGPVISAEAKERI
                     EGYIKEAVDAGATLLLDGRGAKVPGREGGFWLGPTILDRVRPEMRIAREEVFGPVLAI
                     IRTAELEEALAIENASPYGNAASVFTASGAAARDVTERASAGMIGVNVGVPVPREPFS
                     FGGWNESKFGAGDITGRGSIEFWTRTKKITTRWSDHD"
BASE COUNT          355 a          590 c          674 g          343 t
ORIGIN      
        1 gctcgagatc agcgaatctc cgtggggacc ctggatccca ttctccgggt tggcgggtag
       61 ctgaaggcac gtctgcgtgg cctgagtgag cgggacggcg ttgtgactgg ataggagtcc
      121 ggacccgagt ccgcctgtac catcgatacc ggagtcgtcc gtcgctggaa cggcctgcgc
      181 gggcaccaaa ggcacccgga agagaagcac tattagcagc aacgctgcac cgagagattt
      241 catggggcgg aatttaatat tcggtgctga gatcccgtac ggtggaccgc ggtaagccaa
      301 aagccctaac gcggggctta ccgaataggt aaactctcgc actatgaccg ttctcgtttc
      361 tgctcgagtg gccaagtacc ccgcggcccg aaacttcgtg ggtggcaagt tcgccgagag
      421 cgaatcgccg cgactcgagg tgctgaaccc cagcgatggc tcgctgttgg cgcacgtgcc
      481 gctctccacg gccgacgaat tggatcaggc cgtccgctcg gcgcgccgcg catttgctgg
      541 gtggtctgcc acaccgatca aggagcgggt acagatcttc tttcgctatc gcgacctgct
      601 ccagcgcgac ttcgatgatc tggcagcgct gatctcggag gagcacggga agatccggag
      661 cgaagccgaa gcggagatcg tcaaggcgat cgagctgacc gagtttgcct gctccctgcc
      721 gcagatcgcc gccggcgagg tgctggaggt gagtcgcggc gtcgaatgcc ggatggatcg
      781 ctatccgctc ggcgtggttg cctcgatcgt gccgttcaac ttccccagca tggttccgca
      841 ctggacgatc cccaacgcca ttgcgttggg gaactgtctc atcctgaagc catcggagct
      901 ggtcccgctg agcgccggcc ggatcgccga gctgctcacc gaagccggac tgccgccggg
      961 agtgttcagc gtggttcacg gtgcgcgtga gctcgtcgag gcgatctgcg atcacccgga
     1021 tatcttcgcc gtaagcttcg tgggatcaac caaggtggcg aaggtggtct atcggcgggc
     1081 cacccagaac ctcaagcgag cactggcgct gggaggagcc aagaaccacc tcttcgtcct
     1141 gcccgatgcc gatgtcgagc tcagcgccgg tgggatcctc aactccatgt ccgggtgcac
     1201 cgggcagcga tgcatggccg gctccgtcat gctcgcactc gcgggcaccg atgcgatcgt
     1261 ccgccggctg gtggaacagg ccaggcagat ggtcccgggc aaggacctgg gaccggtcat
     1321 cagcgccgaa gccaaggagc ggatcgaagg ctatataaag gaggcggtag acgccggcgc
     1381 tacgctgctg ctcgatgggc gcggcgcgaa ggttcctggg cgagagggcg gcttctggct
     1441 cggccctacg attctggatc gggtacgacc ggagatgcgg atcgcgcggg aagaggtctt
     1501 cggtccggtg ctagccatca tacggaccgc cgagctggag gaagcactgg cgatcgagaa
     1561 cgcgtcgccc tatgggaatg ccgcctcggt cttcaccgcg agtggtgccg cggccagaga
     1621 tgtcaccgag cgggcgagcg ccggcatgat cggagtgaac gtcggggtgc cggtgccgcg
     1681 ggagccgttc tccttcggag ggtggaacga atccaagttc ggcgcgggag acatcaccgg
     1741 ccgcggatcg atcgagttct ggactcgaac caagaagatc accaccaggt ggagtgatca
     1801 tgactgagat catgcggccg ccgctggcga tgccgccgtt cgattaccgg ccgcggccct
     1861 ataccggccc gagtcgggag gaggtgctgg cgctgcgccg gcaacacgtg aatccggcgg
     1921 tgttcacgct ctaccgcgag ccgctgatga tcgtcgaagg ga
//
LOCUS       DASRPQ010001764         1150 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3375443, whole genome shotgun sequence.
ACCESSION   DASRPQ010001764 DASRPQ010000000
VERSION     DASRPQ010001764.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3375443"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..877)
                     /locus_tag="VFD73_20030"
     CDS             complement(<1..877)
                     /locus_tag="VFD73_20030"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HZI76262.1"
                     /translation="MASQGKVSVVLPVLNEEENIVVLVRDLSDLFAKLPYELEVIIVN
                     DGSGAPTTAALQRLCQQYPQVGVLHLSRNFGHQAALSAGLDEAGGDAVIVMDSDLQHP
                     VAVIPELIGRWENGADIVFTVRSDAPTLPPLKRMTSRLFYRVINGLSEGVITPGAADF
                     RLMNRPAVDALREMPERTRFLRGLSAWIGFRQDFVPFVPAARRSGQSKYDFAYMLRFA
                     LDGIISMSTAPLKLALLTGTLLSGISFVYLVYVVWAYYYTNRSIIGWSSLIVAMLFLG
                     GLQINLIGVLGLYIGK"
     gene            complement(877..>1150)
                     /locus_tag="VFD73_20035"
     CDS             complement(877..>1150)
                     /locus_tag="VFD73_20035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76263.1"
                     /translation="ERCVAPLGVDYAGHLTAARVDAALEEWDRPRRAAPERLAELVTH
                     PAVEDADLRERYGHWRFQWQQEYDLLASGQLRSLFQKHSVSPAGGA"
BASE COUNT          243 a          353 c          364 g          190 t
ORIGIN      
        1 tcttcccgat gtacagccca agaaccccga tcaggttgat ctggaggccg ccgagaaaca
       61 gcatggcgac gatcagggac gaccagccga tgatgctgcg attggtgtag taataggccc
      121 acaccacgta gaccagatac acaaaggaga tgcccgatag gagggtacca gtgagaaggg
      181 cgagcttgag tggcgccgtg ctcatggaga tgatgccgtc gagggcaaag cgcagcatgt
      241 aggcgaaatc gtatttggat tggccgctgc gcctcgccgc ggggacgaag ggcacgaaat
      301 cctgtcgaaa gccgatccag gccgacaagc ctctgagaaa acgggtccgt tcaggcatct
      361 cgcgcaacgc atccacagcc ggccggttca tcagacgaaa gtccgccgct cccggcgtga
      421 tgactccctc ggacaggccg ttgatcaccc ggtagaacag gcgcgaggtc atccgcttga
      481 gcggaggcag cgtgggcgca tcggaccgga ccgtgaacac gatatcagcg ccgttttccc
      541 atcggccgat gagctcagga atgaccgcca ccgggtgctg gagatcggag tccatgacga
      601 tgacggcatc cccgcccgcc tcatcgaggc cggccgacag ggctgcctga tggccgaagt
      661 tgcggctcag gtgaaggaca ccgacctgag gatactgctg acacagcctc tggagtgccg
      721 cggtcgtggg agctccggac ccgtcgttca cgatgatgac ctcgagctcg tacggcagct
      781 tggcaaagag gtcggacagg tcccggacga ggacgacgat gttctcctcc tcgttcagca
      841 cggggaggac gacggagacc ttaccttggc tagccatcat gctcctcctg cgggactgac
      901 ggaatgcttc tgaaaaagag aacgcaactg acccgatgcc agcagatcgt actcctgttg
      961 ccattggaag cgccaatgac cgtaccgctc gcgcaggtcg gcatcctcca ccgccgggtg
     1021 tgtcaccagt tccgccagcc gctcaggcgc cgctcgcctg ggccgatccc attcttccag
     1081 ggcggcgtcc acgcgggcgg ctgtgagatg accggcatag tctacgccaa gtggtgcgac
     1141 acaccgttcc
//
LOCUS       DASRPQ010001765         2171 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1479938, whole genome shotgun sequence.
ACCESSION   DASRPQ010001765 DASRPQ010000000
VERSION     DASRPQ010001765.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1479938"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(489..1607)
                     /locus_tag="VFD73_20040"
     CDS             complement(489..1607)
                     /locus_tag="VFD73_20040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZI76264.1"
                     /translation="MPQRSKVFVGLDTSKLKIAVALAEEGRQGEVRFLGEIDNTPEAV
                     RRLVSKLASRHSEVLFCYEAGPTGYGLQRQISALGHECVVIAPSLIPKRPGERVKTNR
                     RDALTLARLHRAGELTAIWVPDPGHEAVRELVRAREAAMADLRAKRQHLQSFLLRHGR
                     LFPGRKPWTRAHARWLSELAFEHPAQYLVLREYRQGIEDAQARLERLTQQIADVLTTW
                     SMAPVVEAYQALRGVALLTAVTFVAEIGDVHRFESPRQLMAYLGLVPCESSTGERVRR
                     GSITKAGNTRVRRVLIEGAWTYRFPARMSRLLQERQANLPQLVRTIAWKAQVRLCARY
                     RRLMAAGKRQTVVTTAIAREMAAFLWAIGHAIEPRSAA"
BASE COUNT          389 a          750 c          659 g          373 t
ORIGIN      
        1 atccccgccc cgactggccg gacggggttt ttctgggtct atgctctgct cgtcgccaaa
       61 ttagcgacga gcacttccgg aacgggcgtt ttcggttcca taaacgcgtt tacgcgcaag
      121 ccgtctgtag gcgcaaagct aaaatgtcag ccctgagcaa agtcaaactc tgatgttcgg
      181 tgtcaaaggc tgtgaacgcg acagctcgct ccctgcaaag attggggcca ccgagataga
      241 gcgattgcgc agggccggag acagggctgt tcagacgacg gttgagcaaa ctctgatgcg
      301 cggcttggtc cccgcagttc cgtctgttcg tccggggctg cctcgatctg tcagcgggcg
      361 tcgatgaagg ctcatcggct acacagttcg tacgagggtt ccccaccgag gccctgcccc
      421 cggccctgcg caatcgcaga tgtcagtcca agtgaatcgg accctccgcg ggactgaggt
      481 ggttcgactt atgcggccga gcgcggctca atcgcgtgac cgatcgccca caggaacgcc
      541 gccatctccc gtgcgatggc ggtggtgacc acagtctggc gcttgccggc cgccatcagc
      601 cgacgatagc gggcacacag ccgcacctga gccttccagg caatcgtccg cacaagctgc
      661 ggcaggttcg cctggcgctc ctggagcagt cggctcatcc gggccgggaa gcgataggtc
      721 caggctccct cgatcagcac gcgccgcact ctggtgttgc cggccttggt gatgctgccc
      781 cgccgcaccc gctcgccggt cgagctctcg cacggcacca aacccagata ggccatcagc
      841 tgccgcgggc tctcgaaccg gtgcacatcg ccaatctccg ccacaaaggt cacggcggtg
      901 agaagcgcta caccgcgcag ggcctgatac gcctcgacca caggagccat cgaccaagtg
      961 gtgagcacat cggcgatttg ctgcgtcagg cgctccagac gggcctgcgc atcctcaatc
     1021 ccctgtcggt attcccgcag gaccaaatac tgggccggat gctcgaaggc gagttcggac
     1081 aaccaccgcg catgggcccg tgtccagggc ttgcggccgg gaaagagccg cccatggcgc
     1141 aacagaaacg actgcagatg ctggcgcttc gcgcgcagat ccgccatcgc ggcctcccgc
     1201 gcccgcacca gttcgcggac agcctcatgg cccggatccg gcacccagat cgcggtcagc
     1261 tcgccggccc ggtggagccg ggccagggtc agcgcatccc ggcggttggt cttcacgcgc
     1321 tcgccggggc gcttcgggat caatgagggc gcgatgacga cacactcatg cccgagagcg
     1381 gagatctggc gctgcaagcc atagccggtc ggacccgcct cgtagcagaa cagcacttcg
     1441 ctgtgccggc tggccagctt gctgacgagg cgccgcaccg cctcgggcgt gttgtcgatc
     1501 tcgccgagga agcggacctc gccctggcgg ccctcctcgg ccaaggcgac cgcgatcttc
     1561 agcttggagg tatccagacc gacaaacact ttgcttctct gcggcatggc tcgtcccttg
     1621 tgcgggaggc gcggcgccgg cccatccgga acaaccctcg ctcgtcccag agcggggacg
     1681 agccacctcc gccggcaacg aacatacggt ctgtctcaga atgatcctgc ggagctcttc
     1741 gctcgtcata ctcctgctcc gccattcgtc attccaccct tgcaggtaac catgccaagc
     1801 cgacattcgc cagatggacg gttcatcccc gggcgttcgt ggatcgaacg gaaccagaga
     1861 tgacctccga ccaatgccac gaagcggttt taccttctcg cctgcagaca tcccgacacc
     1921 ctcaagcgct ttcggcgccc cgccgcgatt gagacggcat ggcaactccg gcgccatcct
     1981 gcgcggatcc gcttggccct cctcgcccca gatcgagcat gtccgaaact gagcagatcc
     2041 gctccgccag atggccatct tgcacatctt cgtggtcacg gggccttcat aggaccgttc
     2101 aaagccacgc tttctgaagc cggaatgatg gcgagcccga aagccgggcc acggcgatgg
     2161 cgcgcctggt g
//
LOCUS       DASRPQ010001766         1719 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2114327, whole genome shotgun sequence.
ACCESSION   DASRPQ010001766 DASRPQ010000000
VERSION     DASRPQ010001766.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2114327"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..202
                     /locus_tag="VFD73_20045"
     CDS             <1..202
                     /locus_tag="VFD73_20045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76265.1"
                     /translation="DWANQPVNGREGRFDVQADTQILTFKNASGQWVVIQAPVSLGWD
                     SAELPKFAGGVQVLAAAQQGRG"
     gene            296..368
                     /locus_tag="VFD73_20050"
     tRNA            296..368
                     /locus_tag="VFD73_20050"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:329..331,aa:Arg,seq:cct)
     gene            543..1640
                     /locus_tag="VFD73_20055"
     CDS             543..1640
                     /locus_tag="VFD73_20055"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HZI76266.1"
                     /translation="MVPDGKRIRRKVFGKTKQEVSDRLKVLHKEMEAGVKSSKTYTVR
                     EAGEDWLREGLDGTSERTRTLYEGLLGPLLDAIGARPLRDLSAGDVRSGLGKLADRYS
                     TRSLQITRLSLERAIRHAEADDLVGRNVAALVKAPQGRTGRPSKSFTLQQAKALLATA
                     EGTRLHAYVVLSLLVGIRTEEARALRWDHVVTWVDDSAGWQPVTTAGFDPARVGEDRY
                     AIYVWRSERHGGDTKTEKSRRTLALPHRCVKALRQHMEQQDRDRLLAGELWQEHGLVF
                     ASRVGTPLSANNVIRAFRIITKKAGLGEDWVPREMRHTFVSVLSANGVPVESIALLAG
                     HERTATTESVYRHEIRPALTQGAEVMDKIFG"
BASE COUNT          302 a          555 c          592 g          270 t
ORIGIN      
        1 cgactgggcc aaccaaccgg tgaacggacg ggagggcagg ttcgacgtgc aggccgacac
       61 ccagatcctc accttcaaga acgccagcgg gcagtgggtg gtcatccagg cccccgtgtc
      121 gctcggctgg gacagcgccg aactgcccaa gttcgccggc ggcgtgcagg tgctggccgc
      181 cgcgcagcag gggcgcggct gaccggctga gcccgcctgc ctggcatgac ggctgccgcc
      241 gtggccctct cggcggcagc cgtccgtgta tccgggtagg ctatggcgtt ggcaggcccc
      301 gatagctcag cggatagagc gactgcctcc taagcagtag gtcccgcgtt cgagtcgcgg
      361 tcggggcgca ggtcagaggc ctagagcctc atcggacggc gcagcgggga gcctaacggg
      421 gagcctaagt gttaggcttc tccccatgtc cgagacgaaa gtcacccgcc gcagccgcgg
      481 cgaggacgcg atctacttcg ctgcggcgaa gaaccggtac gtgggatcgg tgtcgctcgg
      541 ctatggttcc cgacggcaag cggatccggc gcaaggtctt tggcaagacc aagcaggaag
      601 tcagcgaccg gctcaaggtg ctccacaagg aaatggaagc tggcgtcaag tcctcgaaga
      661 cctatacggt gcgcgaggct ggggaggact ggctgcgcga gggcctggac ggcacgtccg
      721 agcggacgcg caccctctac gagggtctgc tggggccgct gcttgacgcg ataggcgccc
      781 ggccgctgcg cgacctgagc gcgggtgatg tccggtccgg gctcggcaag ctggcggatc
      841 gctattccac ccgatccttg cagatcaccc ggctttcgct ggagcgggcg atccggcacg
      901 ccgaggctga cgatctcgtc ggacggaacg tcgcggcctt ggtgaaagcg ccgcagggcc
      961 gcaccgggag gccatcgaag agcttcacgc tgcagcaggc gaaagccctg ctggccacgg
     1021 cggagggcac gcgccttcat gcgtacgtgg tgttgagcct gctggtcggc atccgcactg
     1081 aggaggcgcg tgccctccgg tgggaccacg tggtgacctg ggtggacgac tcagccggat
     1141 ggcagccggt taccaccgct gggttcgatc ctgcccgggt aggtgaggac cggtacgcga
     1201 tctacgtctg gcgttcagag cggcatggcg gcgataccaa gactgagaaa tcccggcgga
     1261 ccctggcgct accgcaccga tgcgtgaagg cgctccgcca gcacatggag cagcaggaca
     1321 gggaccggct gctggctggc gaactttggc aagagcacgg cctggtcttc gcctcccggg
     1381 tcggcacgcc gctttccgcg aacaacgtca tccgcgcctt ccgcatcatc accaagaaag
     1441 caggccttgg cgaggactgg gttccccggg agatgcggca taccttcgtg tcggtcctgt
     1501 ccgcgaacgg cgtccctgtg gaaagcatcg ccctgctcgc cggacacgag cgtactgcta
     1561 ccaccgagtc ggtctaccgc cacgagatcc gtccggcact cacccaaggc gcagaagtaa
     1621 tggacaagat cttcggttaa cagcgaacct cggcaggtcc tattccctgg ccttcaggca
     1681 aatgcgacag ccattttacg ccacgcatga ccctccgct
//
LOCUS       DASRPQ010001767         1765 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4274425, whole genome shotgun sequence.
ACCESSION   DASRPQ010001767 DASRPQ010000000
VERSION     DASRPQ010001767.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1765
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4274425"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1049..1186
                     /locus_tag="VFD73_20060"
     CDS             1049..1186
                     /locus_tag="VFD73_20060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76267.1"
                     /translation="MILDWLGSVWVIIPGVEVDDGRLADIRDRYGIAELQIFGSQASL
                     H"
     gene            complement(1581..>1765)
                     /locus_tag="VFD73_20065"
     CDS             complement(1581..>1765)
                     /locus_tag="VFD73_20065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76268.1"
                     /translation="GGGEQSVINWFINRQDSGSTAFTPMLMAESLALNLLFRAVRPRA
                     SRHRAKRWTHRSRALL"
BASE COUNT          332 a          535 c          558 g          340 t
ORIGIN      
        1 tgccgcaggt tcaggacccc gagcaagcgg cgcggatcgt tgccgccgca catcaggtat
       61 gcccgtattc caatgccacc cggggcaaca tcgacgtgag gctgacggta aacggccgcg
      121 acatcggctg aaccgctccc ccgcaactgc gaccggggcg agactctgcg tggacagtcg
      181 gagagaccac tcggtccagg gagccggctc gtgatttagg atgacagccg gccccggaga
      241 ccggtcggcc actgcgaaca ttaagggcgg ggaggcccga ccgcgaacgt catcgatgga
      301 ggtactgggc cgcgatgcga gccacatggg tgaagtgggc cagccaccgc tgactgggcg
      361 gcggcgcggt ggggtcccgc catggcggag tctacgccgg ccccgggcgc ggatcggaac
      421 ttccaggtca tccgcagcga gctcttcgcg tcggtgccgc cgaacccgac gtccatttga
      481 ttcagggaat ggcacgccca gctctggacc agcgtctcgg gcgatctcgc gacctctccg
      541 agattgtggc cattctccca cgcgtaggat ccgcacaggt gttcgggaat gaccgccgca
      601 tataccttct ctggaaccat tcgggagatg agcggtgcca ctatcagcgc atccttgccg
      661 cttgggtcgt ccccccggac ggccgcccac tgcccggttc ccgccggtca cctcccagtc
      721 gcaagagtat ttctccacgg aatcgtaggc gtccggggag gccaggatga aaagcgttca
      781 gtgcctggtc ggcacaaccg tcaccaggtt gtttgcctgg tgggcgcaac tgggtcgaac
      841 cagtgacccc tcgcttgtaa ggcgcaattt tactgccgct agacgtggcc tgacgtagct
      901 tgaagtgcca gttagctgga ctttcgtcgc cagacgtcgc ggggcgtcgc ttggggtctg
      961 cctccgttgg ctccccgttt ggctcccgga atatcattag cctttgctaa aggatgtaag
     1021 cggttcacga gagcgtgccg gtccgcgggt gatcctggac tggctggggt cagtgtgggt
     1081 gatcatcccg ggcgtcgagg ttgacgacgg acgtctggcc gacatccgcg accggtacgg
     1141 aattgccgag ctccagatct tcggctcaca ggcatccctg cactaagact ttgacagagg
     1201 gaccgaatgc ctcggctgat acattgcccg caggtgagtg caccgaacgg atgcgcgtga
     1261 gccgttagcc accgccgtcg cgacatgaca ggcattaata ctcagagatg cttttcgagc
     1321 tcgatctcat cccgcatgga ttcccgtagg cgcccaccag ggggatctcc ggctggctag
     1381 cgaccaatgt tacttaaggg cgtagacaag gccctcgtgg cacaagcggc aacagcgaca
     1441 ggagcggcat aatttgaaat acattgatga gatttatcaa attgttacct gctcgggtcg
     1501 gtggctgacg gcaaccggat attgatttcg gcgagctctg gcggtcgcgc tcccaagagc
     1561 gcgtcaagaa attccagtgg tcagagcaag gcgcggctcc ggtgagtcca tcgttttgcc
     1621 ctatgcctgg atgccctcgg ccgcaccgct ctgaacagga gattgagagc cagtgactcc
     1681 gccatcagca tcggtgtgaa tgcggtgctg ccggaatcct gccggttgat aaaccaattg
     1741 atgacggatt gttcacctcc cccaa
//
LOCUS       DASRPQ010001768         1040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_214915, whole genome shotgun sequence.
ACCESSION   DASRPQ010001768 DASRPQ010000000
VERSION     DASRPQ010001768.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214915"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..472
                     /locus_tag="VFD73_20070"
     CDS             <1..472
                     /locus_tag="VFD73_20070"
                     /inference="COORDINATES: protein motif:HMM:NF020742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HZI76269.1"
                     /translation="AREGMKPGAKYYEWEGRGVPLRLEMGPRDVSSGSVVLARRTGGK
                     KETIPLEGVAPRLITAMNQMQTDLLEAAKKRREDATLRGATKAQFIDKMEQEGGFVYG
                     GFCGSPACEAEIKEQTKATIRVLPDEEFRSPTPPTRCLWCDRPSVAEAVWAKAY"
     gene            454..>1040
                     /locus_tag="VFD73_20075"
     CDS             454..>1040
                     /locus_tag="VFD73_20075"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF014803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HZI76270.1"
                     /translation="MGEGVLSGKAKRAGSGRAGAGSVISRELLFTDAGLERRGPSLYL
                     GTVSLSEIALEVGTPVYVYHADPIRERYRMLDAALQPLRHRICFAVKANSNLGVLRIL
                     RELGAGADIVSAGELARALAAGFSPESIVFSGVGKTAAELKAAIQARVGHLNVESTEE
                     LELLASVAEEARATVQVGIRVNPDVTTDTHPYISTG"
BASE COUNT          192 a          299 c          374 g          175 t
ORIGIN      
        1 tgcccgcgag gggatgaagc cgggcgccaa gtactacgag tgggagggac ggggcgtccc
       61 actgcgactg gagatgggcc cgcgggatgt gtcctccggc tccgtcgtgt tggcgcggcg
      121 aaccggggga aagaaagaga ccattcccct ggaaggtgtg gcgccgcgtc tgatcacggc
      181 catgaaccag atgcaaaccg atctgctcga ggccgccaag aaacggcgcg aggatgccac
      241 gctccggggg gctaccaagg cgcagttcat cgacaagatg gagcaggagg gcggcttcgt
      301 gtacggcggc ttctgtggct cgcccgcctg tgaggcggag atcaaggagc aaaccaaggc
      361 gactatccga gtgctgccgg acgaggagtt tcgctcgccg actcctccca cccggtgtct
      421 gtggtgcgac cggcccagcg tggcggaggc ggtgtgggcg aaggcgtact gagcgggaag
      481 gcgaagcggg caggttctgg ccgtgccggc gcagggtcgg tcatttccag ggagctgctg
      541 tttaccgatg ccggtctcga gcggcggggt ccgagcctct accttgggac cgtatcgctg
      601 tcagagatag cgctggaggt gggcacaccg gtctacgtct atcacgccga tcccattcgg
      661 gagcgctacc ggatgctgga tgcggcactg cagccacttc gacaccgaat ctgttttgca
      721 gtaaaagcca acagtaacct tggcgtgttg cggattctgc gcgagctcgg cgcgggcgct
      781 gatatcgtct cagccggcga gctggccagg gcactggccg ccgggttctc tcctgagagc
      841 atcgtcttca gcggcgtagg aaagacggct gccgagctga aggcggcaat acaggctcgg
      901 gtgggacatc tgaatgtaga gtcgacggaa gagctggagc tgctcgccag cgtcgccgag
      961 gaggcaaggg caaccgtcca ggtcggcatt cgggtgaatc cggatgtcac gaccgacact
     1021 catccctaca tctccaccgg
//
LOCUS       DASRPQ010001769         1107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4274459, whole genome shotgun sequence.
ACCESSION   DASRPQ010001769 DASRPQ010000000
VERSION     DASRPQ010001769.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4274459"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..632)
                     /locus_tag="VFD73_20080"
     CDS             complement(<1..632)
                     /locus_tag="VFD73_20080"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HZI76271.1"
                     /translation="MATLNYAAPSTVDEAVKLLAGSTGLAKVLSGGTDLLVQMRSGHL
                     KPELIVDTKKIPGIIGIREEGGGFVVGAATPGAMVEAHPGMNKARPGVVEALDLIGSQ
                     QIQGRCTFAGNLCNASPAADSVPALYAAGAIAVVVGGKGRREVPVEQIPAGPGRTNLA
                     KDEFILEFKFPPRPPRSGDAYLRFIPRTEMDIAVVGCGISVTLDDKGVCTA"
BASE COUNT          213 a          365 c          334 g          195 t
ORIGIN      
        1 gcagtgcaga cgcccttgtc gtccagcgtc acgctgatgc cgcagcccac cacggcgatg
       61 tccatctccg ttcgcgggat gaaccgcaga taggcatcgc ctgagcgcgg cgggcgcggt
      121 gggaacttga attccaggat aaactcgtcc ttggccaggt tggttcgccc cggaccagcc
      181 ggaatctgtt cgaccggtac ttcacgccgg cccttgccgc caacgacgac ggcgattgcc
      241 ccagcggcat acagcgccgg gacactgtcc gccgcgggcg atgcattgca gagattgcca
      301 gcaaacgtgc aacggccctg gatctgctgt gagccgatca ggtccagcgc ctcgaccacg
      361 cccggccgag ccttgttcat gccagggtga gcctcgacca tggcgcccgg ggtggcggcc
      421 ccgacaacaa atccaccgcc ctcctcgcgg atcccaatga tcccggggat tttcttggta
      481 tcgacgatca gctcgggctt caggtggccg gaccgcatct gaaccagcag atcagttccc
      541 cccgaaagca ccttcgccag cccggtcgac ccggccaaca gcttgacggc ctcatcgacc
      601 gtcgatggtg cggcatagtt gagcgttgcc attcctgctc ccgatgtctg cgcgcgttga
      661 taggcccggt tccatggtgc accaggccgg aggaccccaa ggttatgcga tcaggggggg
      721 cgggtcgagg gggcgacgcc tgattcggcc attgcgccac gacttcagct cattgatcct
      781 gcccggacgc gcctcgtcgg cctgtctggc caccaaccgt cgtaacccaa aagccacgat
      841 tggctaggga gatagccctt cccaggccct tcaatagatg gaccactacg acgatagaag
      901 gaccaccacg gcgggaaatg ccgcaaaacc cagagcgatg cgtctttatg ctacagaaca
      961 tcacaaactg gattgtcagg ccggtgatgc cacctgagtc ttggctacca ggtccagcgg
     1021 tggttgatgg ctagtctcgg aaccgcaata ggcgggacgg accaccatct cgcagtcgca
     1081 ctgacccggt gggtacgcgg agctata
//
LOCUS       DASRPQ010001770         3467 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_517166, whole genome shotgun sequence.
ACCESSION   DASRPQ010001770 DASRPQ010000000
VERSION     DASRPQ010001770.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3467)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3467)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3467
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_517166"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..496
                     /locus_tag="VFD73_20085"
     CDS             <1..496
                     /locus_tag="VFD73_20085"
                     /inference="COORDINATES: protein motif:HMM:NF014269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HZI76272.1"
                     /translation="AIGCIAEVRLNQELPDGRSNIVVLGGTRFKVARVLDDPAPYLIA
                     QIETFEDEPGSEPPVEAVDALRQLFDRYLAGVRELNDTPPDDPALPEDAASLSFHVAG
                     AIECDVAVKQRLLAQRSTARRVNDLCLLLPILTSAVDHGVEVHRRAHRNGGGGKMPDM
                     RPVP"
     gene            493..1914
                     /locus_tag="VFD73_20090"
     CDS             493..1914
                     /locus_tag="VFD73_20090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HZI76273.1"
                     /translation="MSPSLLAALGRIVGHKWVRHRRAELATYAMDGLPTHESVPGVVV
                     MPETPAQVREIVHLLHLVQVPFVARGAGTGLSGGALAQPEAVLISLTRLNRILEIDPA
                     RRRAVLQPGVVNARLSEAVLPFGLYYVPDPSSQAACTIGGNVAENAGGPHCLKYGVTT
                     NHIVALEVVLPDGTVTRLGSPQGEPWGPDLVGLFVGSEGMFGIATEITVRLERIPESV
                     RTMLADFSTVREASEAVSAIIAAGIVPAALEMMDRACVAALEASIYAAGYPTDAAAVL
                     LVELDGQSEAVDGEAATVQEILLSCGARQVRAASTPADRARLWLGRKKAFGAMGRIAP
                     DLAVQDAVVPRSALPAIMDQIEGIRREYQLTISNVFHAGDGNLHPNISFDRKNPAVAA
                     RVRSACREIMAACVAVGGSITGEHGVGNDKLDYMPWIFDADTLAAMRAVRRAFDPTEM
                     ANPGKVVPIHACREWTAVRSARG"
     gene            1911..3122
                     /locus_tag="VFD73_20095"
     CDS             1911..3122
                     /locus_tag="VFD73_20095"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HZI76274.1"
                     /translation="MSDTIFTRLRALLGTTGVERDAHGVPRATPDTPDALSLVCRLAH
                     EEGWKIRVEGRGTWLPPDAPADLVVSTSGLEQVVSVSPADLVATVQAGTPLEALRRRL
                     ADFGMWLALDPPGRPERSIGSIVATATAGPLRHGFGPVRDHVLGCSVATGDGRLVNAG
                     GRVVKNVAGYDVTKLHVGGFGGFGIIAELHLRLRALPRADVTLLARGTRDALTSVARD
                     IVAGNLLPGALELLSPALAAEADWVLAARLVGTETAVQADVRRLASLSDLTWVPIPAD
                     RTAAFWTVAARGSLGGPVTLRLGVLGDGVDDAIDLLAHDLDEGLVSAGAGSGMIRWTG
                     SAPLERLRAVRRAAASREIPMTLERAPWAIRRALGHFGAYREGVGKIVGRLRGTFDPG
                     QCLSVALEGAD"
     gene            3124..>3467
                     /locus_tag="VFD73_20100"
     CDS             3124..>3467
                     /locus_tag="VFD73_20100"
                     /inference="COORDINATES: protein motif:HMM:NF024581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HZI76275.1"
                     /translation="MQANAASGYSALDPCVHCGFCLPACPTYLVTGDESHSPRGRIVL
                     MRALERGDISAADSSLVDHLDACLGCRGCEPACPSGVGYGRGLEAARAQLYAARGLPP
                     LARLVLGVFRYR"
BASE COUNT          556 a         1087 c         1187 g          637 t
ORIGIN      
        1 cgcgatcggc tgcatcgccg aggtacgtct gaatcaggag ctccccgacg ggcgttcgaa
       61 cattgtggtt ctgggaggca cccgcttcaa ggtcgctcgg gtgttggatg atccagcgcc
      121 ctatctgata gcgcagatcg agaccttcga ggacgaacct ggaagtgaac cgccggtcga
      181 agcagtggac gcgctccggc aattgttcga ccgctacctt gccggagttc gggagctgaa
      241 tgacacccct ccagacgacc ctgccctgcc ggaggatgcc gcgagccttt ccttccatgt
      301 ggcgggcgct atcgagtgcg atgtggcggt caagcagcgc ctccttgcgc aacgatccac
      361 cgcccgccgg gtaaacgacc tgtgcctctt gttaccgatt ctgaccagtg ccgtcgatca
      421 tggcgtagag gtgcaccgcc gggcacacag aaatggaggg ggtggaaaga tgccggacat
      481 gcgccccgtc ccatgagtcc atcactcctt gcagcactgg gccgcattgt gggtcacaag
      541 tgggtgcgcc atcggcgtgc ggagctggct acctatgcca tggatggact tccaacccac
      601 gagtcggtgc cgggtgtcgt tgtgatgccg gaaacaccgg ctcaagtccg ggagatcgtt
      661 catctgcttc acctggtgca ggtgccgttc gtcgcacgag gcgccggcac cggactctcc
      721 ggtggggcat tggctcaacc ggaggccgtt ctcatctctc tcaccaggct gaaccgcata
      781 ttggaaatcg atccggctcg ccgccgcgcg gtgctgcaac ccggagtcgt gaatgcccgg
      841 ctatcggagg cggtcctgcc gttcggtctc tattacgtgc cggacccctc cagtcaggcc
      901 gcatgtacga tcggcggcaa tgtcgcggaa aacgccggtg gcccgcattg cctcaagtac
      961 ggcgttacca ccaatcacat cgtcgctctc gaggtcgtgc tccccgacgg cacggtcacc
     1021 cgtctcggct ctccgcaggg agaaccctgg ggccctgatc tggtaggact cttcgtgggg
     1081 agcgagggga tgttcggcat tgctaccgag atcaccgtga gactggagcg aatccccgaa
     1141 agcgtccgga ccatgctggc cgacttctcc acggtgcgag aggctagtga ggccgtttcg
     1201 gcgatcatcg ccgcaggcat cgttcccgcc gctctggaga tgatggatcg agcctgtgtg
     1261 gctgcactgg aagcatcgat ttacgccgcc ggctacccca ccgacgccgc cgcagtcctc
     1321 ctggtggaac tggatggaca gagcgaggcc gtcgacggag aagccgccac ggttcaggaa
     1381 atcctgttgt cgtgcggcgc gaggcaggtt cgcgcggcct cgaccccggc agatcgggcg
     1441 cgtctgtggc tcggccggaa gaaagccttc ggcgccatgg gccgcattgc gcccgatctg
     1501 gcagtgcagg atgcggtcgt gccgagatct gcgctcccgg caatcatgga ccagatcgaa
     1561 ggcattcgcc gcgagtatca gctcacgatc agcaacgtct ttcacgccgg cgacggcaat
     1621 ctgcatccga acatcagctt cgaccggaag aacccggccg tcgcagcgcg ggtgcgctcc
     1681 gcctgtcgtg agatcatggc ggcctgtgtc gcggtgggag gaagcattac cggcgaacac
     1741 ggagtgggca acgacaagct cgactatatg ccttggatct tcgacgctga caccctcgcg
     1801 gccatgcgag cggtgcgccg agccttcgat cccacggaga tggcaaaccc gggcaaggtg
     1861 gtgccaatcc atgcctgtcg cgagtggacc gcggtccgga gtgctcgcgg gtgagtgaca
     1921 ccatcttcac ccggcttcgc gccctgctcg gtaccactgg agtcgagcgc gacgctcacg
     1981 gggttccccg ggcgacgccg gacacccctg atgccctttc tctggtgtgc cgactggccc
     2041 atgaggaagg ctggaagatc cgcgtggaag gacgcggcac ctggttgccc ccggacgctc
     2101 ctgccgatct ggtcgtgagt accagtggac tggagcaggt cgtctcggtc agtccagctg
     2161 atctggtcgc gacggtgcaa gcgggcactc cgctcgaggc actgagacgc cgcctggccg
     2221 atttcggaat gtggctggcg ctcgacccgc cgggccgtcc ggagcggagc atcgggtcaa
     2281 tcgttgcgac ggcaaccgcc ggaccactgc ggcacggctt tggcccagtg cgtgatcacg
     2341 tcctgggctg cagcgtcgct accggtgacg gcagactggt gaacgccggc ggccgtgtcg
     2401 tcaagaatgt ggccggctac gacgtgacca aactgcatgt gggagggttc ggggggttcg
     2461 gaattatcgc cgaacttcat ctgcggctgc gagcgctgcc gcgggccgat gtcacactgt
     2521 tggcacgcgg gaccagagat gcactgactt cggtggcgag agacatcgta gccggcaatc
     2581 tgctccccgg cgcgctcgag ctgctttcgc cggcgctcgc cgccgaggcg gattgggtcc
     2641 tggccgcgcg tctggtggga acggagacgg cggtccaggc ggacgtccgc cgacttgcgt
     2701 cgctgagcga tctgacgtgg gtccccatac ccgcggatcg gacggcggcg ttctggactg
     2761 tggcggcacg gggcagcttg gggggaccgg taacgctgcg tctcggagtg ttgggtgatg
     2821 gcgtcgatga tgcaatcgat cttctggccc acgacctgga cgagggtctc gtgtcggccg
     2881 gggccggcag cgggatgatt cgctggaccg gcagcgcgcc gctggagcgt ttgcgggcgg
     2941 tccgccgagc ggcggcatcc cgcgagatcc ccatgacgct ggaacgggcc ccgtgggcca
     3001 tccggcgtgc tctcggtcat ttcggcgcgt accgggaggg agtcgggaag atcgtgggac
     3061 ggttgcgagg aaccttcgat ccgggccaat gcctgagtgt ggccttggag ggcgcggact
     3121 agaatgcagg cgaacgccgc cagcggttac tccgcgctcg atccctgcgt tcactgcggg
     3181 ttttgcctgc ccgcctgtcc aacgtatctg gtgacgggag acgagagtca cagtccccgt
     3241 ggacgaatcg tgttgatgcg tgccttggag cgaggtgata tctctgcggc ggattcctca
     3301 ctggtggatc atctggacgc ctgtctcgga tgccggggat gcgaacccgc gtgcccctcg
     3361 ggcgtaggct atggccgagg tctggaagcg gcgcgcgctc agctctatgc cgctcgtggt
     3421 ctcccacccc tcgcccggct ggtgctcggc gtcttccgct accgtca
//
LOCUS       DASRPQ010001771         1325 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_833052, whole genome shotgun sequence.
ACCESSION   DASRPQ010001771 DASRPQ010000000
VERSION     DASRPQ010001771.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1325
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_833052"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..673)
                     /locus_tag="VFD73_20105"
     CDS             complement(<1..673)
                     /locus_tag="VFD73_20105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76276.1"
                     /translation="MSLRPPVGRVVATELRPSTPHQFQFWTAQESPIGIGALVRVEEP
                     NRVVYGVVTDGFAYSDIQSPLQAIIAGQADPTASAPARAEVRLYTAAVLRQVPEEPLQ
                     PVPLASVWLATDDDVATALRMDGYTGRELATGIPVGLYAAGGLESPVYLDSEFLLGPE
                     AAHLNITGVSGLATKTSAVEFLLSSIFQTFPAHKGSIAAVCFNVKGPDLCFLDQPAHL
                     SPEDLR"
     gene            763..1239
                     /locus_tag="VFD73_20110"
     CDS             763..1239
                     /locus_tag="VFD73_20110"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HZI76277.1"
                     /translation="MGSTVADHNPLSEVMVPKQSSSEIFYPPSWEPDRTDRLLALFST
                     FSALNEDSRVLVRELRSSIQHMRELKEQIRSRSVAALANSSAAIRATNGDNRYGLTRR
                     ERQVAELLARGKSNAAIARQLGISSHTARHHTQRVLAKLEVHSRAEAGAKLRNHQP"
BASE COUNT          285 a          409 c          397 g          234 t
ORIGIN      
        1 ggcggaggtc ttccggactc agatgggccg gctgatccaa aaaacacagg tccgggcctt
       61 ttacattgaa gcagacggcg gcgatgctcc ctttgtgagc ggggaaggtc tggaagatgc
      121 tgctgagtag gaactcgacg gcgctggtct tggtcgcgag accagaaact ccggtaatat
      181 tcaggtgcgc ggcctcaggc ccgaggagaa actcggagtc caggtagact ggcgactcaa
      241 gaccacccgc ggcatacagg cccacgggta tgccagtggc aagttcccgc ccggtgtagc
      301 catccatccg cagcgccgtg gccacgtcat cgtcggtcgc cagccacacg ctggctagcg
      361 gcaccggctg gagcggctct tccggaactt gccgaaggac agctgccgtg tacaaacgaa
      421 cttctgcccg tgccggcgcc gacgctgtcg gatccgcctg gccggcaatg atcgcctgca
      481 acggggactg gatgtccgag taagcaaaac catcggtgac aacaccatag acgacccggt
      541 tcggctcctc gacccgcacc agagccccga tcccaatggg agactcctgg gcggtccaga
      601 actggaactg gtgaggggtt gacggcctga gctcggttgc aaccacccga ccaactggcg
      661 gtctcagcga cataggtgaa atatggggta gcggatggtc tggcctggaa ctctgtggaa
      721 ctcgggggct tctcccggcc aggatgcatt agaatatatc ttatgggtag caccgtagct
      781 gaccataacc cgctttccga ggtcatggtg ccgaagcaga gttcttccga aatattctat
      841 cctccttcct gggaaccaga ccgtactgac cggcttctgg ccctgttctc cacgttctcg
      901 gctctcaacg aggacagccg agtcctggtg cgggagcttc gcagttcgat ccagcacatg
      961 cgcgagctca aggagcagat ccgcagcagg agcgtcgccg cactcgcgaa cagcagcgcc
     1021 gctatccggg ccacgaatgg cgataatcga tatggcctga cccggcgtga gcgccaggta
     1081 gcggaattgc tagcacgggg caagtcaaac gcagcaattg cgagacaact cggcatcagc
     1141 tcccacaccg cccgccacca tacccaacgg gtgctcgcga agttagaggt ccactcccga
     1201 gcggaggccg gggcgaagct ccgtaaccac cagccctaaa tcctcgacgg ctctccaaaa
     1261 attgcacttg cgcttaggca cttctgccta ttgaacatac ccgtcatcag tcgcggtgag
     1321 gaaaa
//
LOCUS       DASRPQ010001772         1078 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2750609, whole genome shotgun sequence.
ACCESSION   DASRPQ010001772 DASRPQ010000000
VERSION     DASRPQ010001772.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2750609"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1005)
                     /locus_tag="VFD73_20115"
     CDS             complement(<1..1005)
                     /locus_tag="VFD73_20115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76278.1"
                     /translation="MFQLTPADVNATLGFARRVGWRVTVAMALSPTDPTDALAEAAYL
                     AQIGGDALLAVEIGNEPNLFPLNGIRSPGYSVDSFTTEFDASASAIHAQLPHVPLAAP
                     STWCTGGGAWFAEFLDRTKTSLAFATHHFYPMGVPAPANSDERATVENMLSPELMART
                     RACVDSAVTAAHGVVLRVDETNSAFGFGQPGVSDVFASALWGIGYFYTLAELGVAGVN
                     VQTGTNINGGLSCKGIYLPVCDQEGCGLRPLYYAMLLFHEAAVGRFVPMQVTAEGGSN
                     FVAHATVSDDGIVRVALINKEASTAADVTLEVRPAPTAAATALRLLGPSLVTRRGVTL
                     G"
BASE COUNT          209 a          349 c          340 g          180 t
ORIGIN      
        1 ccccaaggtc acgccacgac gcgtgaccag cgagggtccg aggagccgga gtgccgtggc
       61 cgcggccgtc ggagcgggcc tgacctccag ggttacgtct gccgcagtag aggcctcctt
      121 attgatcagc gccactcgca caatgccatc gtcgctcact gtggcatgcg caacgaagtt
      181 ggacccgcct tcagcggtga cttgcatcgg cacgaaccgg ccgactgccg cctcatgaaa
      241 gagcagcatc gcgtaataca gcgggcgcaa cccacacccc tcctggtcac agaccggcag
      301 gtaaattccc ttgcagctaa gtccaccatt gatgttggtc ccggtctgga cgttgacgcc
      361 ggcgacgccc aactcggcca gggtgtagaa atagcctatt ccccacagcg cgctcgcgaa
      421 cacatcactc acgcccggct gcccgaatcc gaatgcggaa ttggtttcgt ccacccggag
      481 tacgactcca tgggccgcgg taaccgcgga gtccacacag gctcgagtgc gggccattag
      541 ctcgggactg agcatgttct ctaccgtcgc gcgctcgtct gagttcgccg gagcgggaac
      601 gcccatggga tagaaatggt gagtagcgaa tgccagcgac gtcttggtcc tgtcgaggaa
      661 ctcggcgaac cacgcaccgc ccccggtgca ccatgtgctc ggcgcggcga ggggaacgtg
      721 aggaagctgc gcgtggatcg cactggcgct cgcgtcgaac tccgtggtga agctgtccac
      781 gctgtatcct ggggagcgaa ttccgttcaa cggaaagaga tttggctcat tcccgatctc
      841 cacggcgagc agcgcgtccc caccgatttg agcaaggtag gccgcttcgg ccagagcgtc
      901 ggtgggatcg gtgggagaga gcgccatcgc caccgtcacc cgccagccaa cccggcgagc
      961 aaatcccaag gtggcattaa cgtcggccgg tgtaagctga aacaacggga gcttggccag
     1021 ccggtggggc gccagactgt atgttgcacg ctgttgcccc cgaagcgcag cgtcccgg
//
LOCUS       DASRPQ010001773         1158 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1801245, whole genome shotgun sequence.
ACCESSION   DASRPQ010001773 DASRPQ010000000
VERSION     DASRPQ010001773.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1801245"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..246
                     /locus_tag="VFD73_20120"
     CDS             <1..246
                     /locus_tag="VFD73_20120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76279.1"
                     /translation="AWWPRAGVAVEVDSRAWHLSPEDWDRTRRRHDLMGEAGIIALHF
                     SPRELRHEPAMVTKRIQGALAKGLARPPLPLRTVPIQ"
     gene            637..>1158
                     /locus_tag="VFD73_20125"
     CDS             637..>1158
                     /locus_tag="VFD73_20125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76280.1"
                     /translation="MPAVPRPPEEQALPEERRPAEKWWLAEKPEPAGKRESAETQGGS
                     AQTQRGSAETQRESGETQPLAVMKSGLGDKWWQAERQGPAGQRRSAETQSLTKKQRPA
                     AKPEATAKPEAAAKPEAAAKPEAAAKPEAAEKRGLDEKWWLAPKQGPAGKPGLPRKLG
                     LPEGQGLAGKPGLT"
BASE COUNT          230 a          357 c          420 g          151 t
ORIGIN      
        1 gcctggtggc ctcgagccgg agtcgccgtc gaggtggatt cccgcgcctg gcacctatcc
       61 ccggaagact gggatcgcac gaggcgccgc cacgacctga tgggcgaggc cgggatcatc
      121 gctttgcact tctccccccg cgaactccgc cacgagcccg ccatggtgac gaagcggatc
      181 cagggcgccc tggccaaggg tctcgctcgt cctcctctcc ccctccgcac cgtcccaatc
      241 cagtagccca atccgagcag ccctgcccac gcggcaggcg cacgtaagcc gggcctggag
      301 cgccaggtcg tggccccaga ccccggccct tagaccgcgc ccccaccagg ccccaagcat
      361 cggactccac ccagctcttc tttcccaaca gcaacacttc gattcaaaga atggaacttt
      421 ctacccgata ggggaggtag agagttccac tcattgaatt ttgcggcagc gtcagggcag
      481 tgcaaggggg gtaggtagtt gggctgtggg actgatgggg ttgcagcgaa aggagatgag
      541 caattcggtg tatcaggacg ggccgggtgt actctgcttt accgggtagc ggcagggatg
      601 ggggtcgcca tggggtacag cgggcataga ggacctatgc ctgccgtacc gcgtccgcct
      661 gaggagcagg ccttgccgga ggagcggcgg ccggctgaga agtggtggct ggccgagaag
      721 ccagagccgg ctgggaagcg agagtcggct gagacgcagg gtgggtccgc tcagacccag
      781 cgcggatccg ctgagacaca gcgcgagtcg ggcgagacgc agccgctggc cgtgatgaag
      841 agcgggctcg gcgataagtg gtggcaggcc gagaggcaag ggccggcggg gcagcgcagg
      901 tcggctgaga cacagtccct gaccaagaag caacggccgg ccgcgaagcc agaggcaacc
      961 gcgaagccag aagcagccgc gaagccagaa gcagccgcga agccagaagc agccgcgaag
     1021 ccagaagcgg ctgaaaagcg agggctggac gagaagtggt ggctggcccc gaagcaggga
     1081 ccggcgggga agccaggcct gccccggaag ctagggctgc ctgaagggca gggcctggct
     1141 gggaagccgg ggctgact
//
LOCUS       DASRPQ010001774         1014 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3023665, whole genome shotgun sequence.
ACCESSION   DASRPQ010001774 DASRPQ010000000
VERSION     DASRPQ010001774.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3023665"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            229..654
                     /locus_tag="VFD73_20130"
     CDS             229..654
                     /locus_tag="VFD73_20130"
                     /inference="COORDINATES: protein motif:HMM:NF021486.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2203 domain-containing protein"
                     /protein_id="HZI76281.1"
                     /translation="MPEFKLFTLEEAERTLPLVRRIVADLTVEYPAWRAAVGRFELLT
                     GGARADWGETQELVAAREEVTRHANRINQYLQELEAVGCVFKGFEGGLVDFYSLRDDR
                     PIFLCWRLGEERINHWHEIDTGFSGRQPIDRAILSAVSS"
     gene            651..>1014
                     /locus_tag="VFD73_20135"
     CDS             651..>1014
                     /locus_tag="VFD73_20135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76282.1"
                     /translation="MNRAWLFLHLLGFTMWLGGAIASMIVGIAAKREDRSGLGAVVRA
                     QSKLTRIAIAPGALLTVLSGLILTFQLSGGDLAGFSIWLVIMQGAGVIAALITLLIAL
                     PTAARLGRLDPTGEAARYF"
BASE COUNT          171 a          307 c          338 g          198 t
ORIGIN      
        1 aactcccccg tggtcagacc ggatcgggag ctcgccggct tcgaggtgcg gatggacctc
       61 gatccctccg agtcacacct ccggcccacc atcacagtgg tcgatgagag cggcaaggtg
      121 gtaggcttca tcagccatcc ggagcagatt ccggaggtga agattgtctg gggttgagtg
      181 atggcagtag cggaaggcca tgctgcccct aaggtgaggt gacgctgaat gcctgaattc
      241 aaattgttca ctctggaaga ggcggaacga acgctgcccc tggtgcggcg catcgttgcg
      301 gacctcacgg tggagtaccc ggcctggcgg gctgcggtgg gacgcttcga gctcctcacc
      361 ggcggtgccc gcgccgactg gggcgagacc caggagttgg tggccgcaag agaagaagtc
      421 actcgccacg ccaaccgtat caaccagtac ctccaggagc tcgaggcggt cggctgcgtg
      481 ttcaaggggt tcgagggcgg gctagtggat ttttactccc tgcgggacga ccggccgatc
      541 ttcctgtgtt ggcgactggg cgaagaacgg atcaatcact ggcacgagat cgacaccggc
      601 ttttccggcc gccagcctat cgatagggcg atcctctccg ccgtgtcctc gtgaaccgag
      661 cttggctgtt cctccacttg ctgggcttta ccatgtggct cggcggggcc atcgcatcga
      721 tgattgtggg catcgcagcc aagcgagaag accgctcggg gttgggcgcg gtggtacggg
      781 cgcagtcgaa gctcacccgg atcgccatcg cccccggcgc gctcctcacg gtcctctctg
      841 ggctgattct gacctttcag ctcagcggcg gtgacctggc ggggttcagc atctggttgg
      901 taatcatgca gggagccggc gtcattgctg ccctgattac gctattgatc gcgctgccca
      961 cagcggcgcg ccttggccgt ctcgacccaa ccggggaagc agcgcgttac ttcg
//
LOCUS       DASRPQ010001775         2520 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1481119, whole genome shotgun sequence.
ACCESSION   DASRPQ010001775 DASRPQ010000000
VERSION     DASRPQ010001775.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2520
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1481119"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            14..717
                     /locus_tag="VFD73_20140"
     CDS             join(14..338,338..717)
                     /locus_tag="VFD73_20140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612025.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HZI76283.1"
                     /translation="MELCCKRCGSAKQVKNGLMRGKQRYLCKDCGLSFTDTPPRGKPL
                     ALKAAAVLLYVSGLSMNRTAKLLGVSTPTIQAWLEQFAATYAQKPEPEGRAVVIELDE
                     MWHYLKKKSEPLWVWKAWDRASGQLVDWECGGRDKTTCERLLERLRRWRTRLYCADDY
                     AVYGVLLPVGQLYTGKDETHGIERDNARQRHWLARFRRRSIVVSKAKHMVDVSIALFA
                     RFAGNDRIGDLISMLT"
     gene            complement(949..2165)
                     /locus_tag="VFD73_20145"
                     /pseudo
     CDS             complement(949..2165)
                     /locus_tag="VFD73_20145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007906821.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
BASE COUNT          442 a          820 c          794 g          464 t
ORIGIN      
        1 gaggaggttg gtcatggagc tgtgctgtaa gcgctgcggg agcgcgaagc aggtcaagaa
       61 cggactgatg cgcggcaagc agcgctattt gtgcaaagac tgcggtctga gcttcaccga
      121 cacgccgccc cggggcaagc ccctggccct gaaggcggct gccgtgctgc tctatgtgag
      181 cggcttgtcc atgaaccgca ccgccaagtt gctcggcgtt tccacaccca ccatccaggc
      241 ctggctcgag cagttcgcgg ccacctacgc ccagaagccc gagccagagg gccgggccgt
      301 ggtgatcgag ctcgatgaga tgtggcacta tctgaaaaaa agtccgagcc gctctgggtc
      361 tggaaggctt gggaccgtgc gtcagggcag ttggtggact gggaatgcgg cggtcgtgac
      421 aagaccacct gtgagcgcct ccttgagcgg ctgaggcgct ggcgcacgcg gctctactgt
      481 gcagacgact acgccgtcta cggcgtgctc ttgccggtcg ggcagcttta tacgggcaag
      541 gacgagacgc acgggattga gcgggacaac gcccgccagc ggcattggct cgcccgcttc
      601 cgacggcgct cgatcgtggt ctcgaaggcc aagcacatgg tggacgtcag tatcgccctg
      661 ttcgcccgct tcgccggaaa tgacaggatc ggcgacctca tatctatgct aacctaaaac
      721 cctccactgt cggagcccgc ctgcgcaaaa gcgccgattc cacagagttc caaaatgtta
      781 gcgtttgtgg acggaaacta gactaggctg gtctcaagaa cccgacgcgc ggtgaatgtg
      841 ttgctgcggg tgtgatcggc ccccgcttgt gagggcttcg cgcacccctc agcgaatccg
      901 tcctacacca tgcccaggga aatcaacgga aatcccgcct agggattgtc agggatcaac
      961 cgctgtattt gagcggttgc tgggttggat cgtgtagttc cactcgccgt gaaaatcggc
     1021 acgggtgatg ttgatggaag ccatctcctg gtcggagaca gcgatgccct tggggtaggg
     1081 gttggcgtcg agttcgcagt gcacggtaag gcccgtatca gtggtggtgg cgctgatcag
     1141 atcaacgatg acacggtagc tgaccagcgg cttggcccgc cagttcatgc tgatgaacga
     1201 gaacaggcgg tgctcgatct tgttccactt gctcgtgccg ggcggcaggt ggtgaaccat
     1261 gatgtcgatg ccgagttcgg tcgcgaggcc ttgcaactcg cgcttccaca gccgcacgcg
     1321 cgagccgttg ctgccgcggt gatcaccagc cgcttggcgt ctggatatcg gacatagccg
     1381 atctcgtgcc accaacgacg gatcgtctgc accgcgaagg cggccgtgtc atggtccata
     1441 ccgacgctga cccagccggc attggcggca agatcgtaga ggccatacgg cactgcccgg
     1501 cccagttcct tgatcaggaa atcatgcacc cgaacttcct ccggctggcc ttgcgggtgc
     1561 cactcccggc cgccgttcct gaagtcgccg accagttcct ttttcttcgt gtccaccgag
     1621 atcaccggct gctgctcggc cagcgccgcg gaaacgctct ggctgatgta ggcgaactgc
     1681 gcatcgcgat ccgggtggcc gctgccctcc ctggtcttgc agttggcctg caggctgaac
     1741 ttctgctgct tcagcagttc cccgacaacc gtgtggctga tccggtggcc acgcgctgcc
     1801 agttccctcg ccagccgccg caggctcttg caggtccagc gcagcggcga catcggatcg
     1861 cctcgctcgc tcggcgccac aagcgccagc aggtcgtcca gcagagccgc gtccgtcgcc
     1921 accaggggct tgcgcccccc gccaggacgg cgaacccggt cggcgtccag ctgggcagcg
     1981 gtggccagct ccttcaagcc ccgaccgatc gtgctcaccg cgatgccggt ggcccgcgac
     2041 acggcggcaa taccgccata cccagccgta cgcgcttcgg ttgccgcaaa cagccgccgc
     2101 ctacgctcat ccagatcggg cattagtaaa gtgaaacgcg cgcgaatgcc ggtcggatcg
     2161 atcatcccaa cacgctacgg gatcactcca ctgccgagaa tccaaccctc cacccgattc
     2221 acctattccc tgacagtcac ttaggtgcat gcgctgtcgc ggctggcggg cgctattgag
     2281 gcgcacggta cgcagcaatt cttcgcgagt tgagaccgcg atgccgcaat caagcggacg
     2341 cccccagtca ggggccgagg cagggctctg ggcgggtggc agtcatccgg acaggatgct
     2401 gtccgcgatc tcagcgggct gctgcgcttc agcttgcgtc gctagccgcc cctgcggccc
     2461 tcgccgcttg ccaggcgcaa ccccgcgctg gtgcgctctc ggctcattgc ccgcctgaac
//
LOCUS       DASRPQ010001776         1433 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2115435, whole genome shotgun sequence.
ACCESSION   DASRPQ010001776 DASRPQ010000000
VERSION     DASRPQ010001776.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1433
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2115435"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..709
                     /locus_tag="VFD73_20150"
     CDS             <1..709
                     /locus_tag="VFD73_20150"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HZI76284.1"
                     /translation="AEGVRLVEEGLAAGIPIRGAAVSPALEATLRGKTLKAALLEREI
                     RIEEYTEAELEALADTEHPQGVVAVIEPKRWSLSDIRMLTGTTAVVLDGVQDPGNVGT
                     ILRTALGLGATGVIALKGTADLTNSKVIRSAMGASFHLPAVPATPEEFVAWAKLQRAE
                     IWIAEGSGEPAERLSGPRADRSPVALVFGNEGAGISSVLESAATRRVAIPLAQGVESL
                     NVAVAAGILLYEVTRER"
     gene            699..>1433
                     /locus_tag="VFD73_20155"
     CDS             699..>1433
                     /locus_tag="VFD73_20155"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HZI76285.1"
                     /translation="MSAELLALHPYWVILAGILGAMLGSFLNVCILRWGAEPKQSVVR
                     PRSRCPRCGKSLAWYENIPIVSWMALRARCRGCGEPISMQYPLIELATAAIWAYVVWR
                     NGLSVEALREAVFGTILLGIAMTDAREYIIPHEFSIGGTAVALLLSLWPDPANLLFVL
                     QGALVGAGAVLLIGELSELAVGQEAMGGGDCALMGLIGAFLGWEAILPVLLLGALIST
                     IIYLISAARRKPREMPQEDSPALQPAG"
BASE COUNT          231 a          441 c          499 g          262 t
ORIGIN      
        1 ggcggagggc gtccgcctgg tggaggaggg cctcgcggcc ggaataccga tccgcggcgc
       61 ggcagtctct ccggcgctgg aagctactct ccgggggaag acgctcaagg cggcgctgct
      121 ggagcgggag attcggatcg aggagtacac cgaagccgag ctcgaggcgc tggccgatac
      181 cgaacatccc cagggggtcg tcgccgtcat cgaaccgaag cgctggtccc tgagcgacat
      241 tcgcatgctg accggcacca ctgcggtcgt gctcgacgga gttcaggatc ccgggaacgt
      301 ggggacgatt ctgcgcaccg cgctcggact cggtgcaacc ggagtcattg ccctgaaggg
      361 gacggccgac ctgaccaact ccaaagtgat ccgttcggca atgggtgcca gcttccatct
      421 tcccgcggtg cccgcaacgc cggaagagtt cgtggcctgg gccaaactgc agcgggccga
      481 gatctggatc gctgaaggca gcggcgagcc ggccgagcgt ctgtccggac cgagggccga
      541 ccgctctccg gtggcccttg tattcgggaa cgagggagcc gggatcagtt cggtgctgga
      601 atccgcggca acccggcggg tcgcgatccc gctggctcaa ggagtagaat cgctcaacgt
      661 cgccgttgcc gcggggatcc tcctgtacga ggtgacccgt gagcgctgag ctactcgccc
      721 tccatcccta ctgggtgatt ctggccggga tactgggagc gatgctgggc agcttcctca
      781 acgtctgcat cctgcgctgg ggagcggagc cgaagcagtc ggtcgttcgc ccccgttcac
      841 gctgcccccg ctgcggcaag tcgctggcgt ggtacgagaa cattccgatc gtttcgtgga
      901 tggcgctgcg agcgcgctgt cgcggctgtg gtgagccgat ctcgatgcaa tatccgctga
      961 tcgagctcgc caccgcggcg atctgggcgt atgtcgtttg gcggaacggc ttgtctgtcg
     1021 aggcccttcg tgaagccgtc ttcggcacca tcctgctggg aatcgcaatg accgatgcgc
     1081 gggagtacat catcccgcac gagttttcca tcggcggaac ggcagtcgcc ttgttgctct
     1141 cgctctggcc cgatccggca aacctgctgt tcgtgctcca gggagccctg gtcggcgcag
     1201 gagcggtgct cctgatcggt gagctgtccg aattggcagt cggccaggaa gcaatgggtg
     1261 gaggcgactg cgcgctcatg ggactgatcg gagcgtttct tggctgggag gcgattctgc
     1321 cggtgctgct gctgggagcg ctgatcagta cgatcatcta tctaatctcg gcggcccgtc
     1381 ggaaacctcg agagatgccg caagaagact cgccggcgct ccagccggca ggc
//
LOCUS       DASRPQ010001777         1220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4275307, whole genome shotgun sequence.
ACCESSION   DASRPQ010001777 DASRPQ010000000
VERSION     DASRPQ010001777.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4275307"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..416
                     /locus_tag="VFD73_20160"
     CDS             <1..416
                     /locus_tag="VFD73_20160"
                     /inference="COORDINATES: protein motif:HMM:NF018184.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GyrI-like domain-containing protein"
                     /protein_id="HZI76286.1"
                     /translation="PIAAVAATTTWHQFPGQWRGMLDEVWACLRQAGVKGGCNVMLYR
                     DLPTAGDVAVEVGVEVSEPLAVTGAVMMSALPAGLVAGTTHRGPYEEIYAAHQAVLRW
                     CATQRRETTGERWEVYGDWHEDPAQLQTMVFYRLR"
     gene            complement(477..848)
                     /locus_tag="VFD73_20165"
     CDS             complement(477..848)
                     /locus_tag="VFD73_20165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017405441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76287.1"
                     /translation="MNIETALKEAMTIDGAVGVCLVDWDSGMSLGALGGGKYLDLDVA
                     AAGNTEVIRAKMRTMESLRLDDAIEDILITLGKQYHLIRLLKNSRDEQGLFLYLVLER
                     QKANLALARHNLKRIEADLSV"
BASE COUNT          219 a          357 c          406 g          238 t
ORIGIN      
        1 ggccgattgc ggccgtcgcg gccacgacta cgtggcatca gtttcccggc cagtggcggg
       61 ggatgctcga tgaggtctgg gcctgcctga ggcaggccgg ggtcaagggc ggctgcaacg
      121 tcatgctcta ccgcgacttg ccgaccgccg gcgacgtcgc cgtggaggtg ggggtcgagg
      181 tgagtgaacc gttggccgtg accggagcgg tcatgatgtc ggccctgccg gccgggctgg
      241 tcgccgggac cacgcatcgc ggtccttacg aggagatcta cgcggcccac caggccgtcc
      301 ttcgctggtg cgccacccag cgccgcgaga ccactggcga acgctgggag gtttacggcg
      361 actggcacga agaccccgcc cagctgcaga cgatggtctt ctaccgcctg cgctaggcgc
      421 gcccgggtct ggctcgccgc accgggccgg atagggaggt cctccggccg gagcctttag
      481 acggagagat cagcctcgat gcgcttgagg ttgtgccggg ccagcgccag gttggccttc
      541 tgccgctcga ggaccaggta gaggaacagg ccctgctcgt cgcgggagtt cttgagcagg
      601 cggatcaggt ggtactgctt gcccagggtg atcaggatgt cctcgatggc gtcgtcgagc
      661 cggagcgatt ccatcgtccg catcttcgcc cggatgacct cggtgttgcc ggccgcggcc
      721 acgtccaggt cgaggtactt gccgccgccg agagcgccga gggacatgcc actatcccag
      781 tcgacgagac atacgccaac ggcgccgtca atcgtcattg cttccttgag ggctgtctca
      841 atgttcacgc ggcccgcctt tctcgctttg tttgattggc cgttgtcacg atagtgtcgc
      901 ccgccgatga tcgtcatggg attgcagcta aacgaattaa ctttaagtag cacaacagct
      961 acctctagtt atgaataggt atctgaactg ggcttattaa ccgaggtata caatgccatc
     1021 ctggtggtca ctattaagta gccagagagt aaggatggcc gggacgagca aatcagtaaa
     1081 ctcggctagc gggcggcgat cgcatcaagt agcgagcgtg gagggggccc tccagtgggc
     1141 ccaagagttg gcagagagtg gacagagaat tttccagcca gatgcaatgc ttgatgccca
     1201 atttggacat ttccgtctta
//
LOCUS       DASRPQ010001778         7194 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3972041, whole genome shotgun sequence.
ACCESSION   DASRPQ010001778 DASRPQ010000000
VERSION     DASRPQ010001778.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7194
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3972041"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..986)
                     /locus_tag="VFD73_20170"
     CDS             complement(<1..986)
                     /locus_tag="VFD73_20170"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HZI76288.1"
                     /translation="MHTRAAWPAQALLASGPKQRGPTWQPNASLLRNLPRLLELSSVP
                     GLALGVVEGGRVWTRGFGKAVEDPAEDASAETLFEGASLGKPLFAYGVLRLVDAKVLD
                     LDRPLYQYLPIPDADNDRMRRVTPRHVLSHTTGLPNWRQQPGPLAPAFEPGQKFSYSG
                     EGYFYLQRVVEAVTGKPFNRFMREQVLDPLGMKQSSYVWRPDFESRMAAGYDGQENRL
                     DVQAAIGRRTLTIAEAWGKPLSDWRYDEAARAVPLVNPQWQTLPIYMVPNAASSLLTT
                     VKDYSRFLTRLVAGTSPDGLQLSPATWKAMTTPQIRLNSALYWGLGWGIQRD"
     gene            complement(1169..1558)
                     /locus_tag="VFD73_20175"
     CDS             complement(1169..1558)
                     /locus_tag="VFD73_20175"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI76289.1"
                     /translation="MLSGARQRIMVVDDDAGVRRSLDTLLRRAGYDVIQAADGREAVQ
                     LWRDHPADLVITDLHMPNKDGFETIIELLSLTPGTPIIAMSGGGQTKRLDLLGNVALL
                     GRVLTIEKPFTLSEMMSVVGQALKRAS"
     gene            1951..2421
                     /locus_tag="VFD73_20180"
     CDS             1951..2421
                     /locus_tag="VFD73_20180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76290.1"
                     /translation="MDSIGVGQNGRFWTLLTVALLVFTRSAAAQVGLASSPARVTLVA
                     HVPAAASIEEAAIAQTTVGAMQETTLTVHLAANSSYRLVVRGTGSGGRRVWVRAADGA
                     YHPLVRGASVTVLQERRAGKEAEQEIWYRTESDGTQSSDPSPPVRYEVVVDPVL"
     gene            complement(2441..2881)
                     /locus_tag="VFD73_20185"
     CDS             complement(2441..2881)
                     /locus_tag="VFD73_20185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76291.1"
                     /translation="MNPRNHAVLLLALSCVLAPACKKNTETASTATSSATATELKISD
                     VQLGRKLSADKRVSDATDKFSPKDTIYAVAVTQGSAPSATVTARWTYKDGGQVIKEDT
                     RSIAPNGTEATEFHISKPSGWPKGKYQVTLTMNGSTESKDFEVK"
     gene            complement(2889..3131)
                     /locus_tag="VFD73_20190"
     CDS             complement(2889..3131)
                     /locus_tag="VFD73_20190"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HZI76292.1"
                     /translation="MPSGDRPKADFSDVESGSSSTASSPAGRSYTVQKGDSLSKIAKR
                     EYGDVQQWHRIYEANRDTIKDPDLIYPGQVIRIPEA"
     gene            3519..3746
                     /locus_tag="VFD73_20195"
     CDS             3519..3746
                     /locus_tag="VFD73_20195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76293.1"
                     /translation="MLREARVRPEFAHLYPMLEPGIWAAAAMVAERVAAVRLQQLADT
                     YVLHDRVLTDAHFEFRGGTPRRHLPPTEGAA"
     gene            3834..4121
                     /locus_tag="VFD73_20200"
     CDS             3834..4121
                     /locus_tag="VFD73_20200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76294.1"
                     /translation="MSASIFRWAVPLVITGFSLSHSDNSLPGLPAGAMKLGVAYFEPP
                     RSIGTPIEDVARTYTGLGLADRIEGRLRLDTDVSLDRTTRELIRRRLAAAS"
     gene            complement(4221..4293)
                     /locus_tag="VFD73_20205"
     tRNA            complement(4221..4293)
                     /locus_tag="VFD73_20205"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4258..4260),aa:Phe,seq:gaa)
     gene            4576..4902
                     /locus_tag="VFD73_20210"
     CDS             4576..4902
                     /locus_tag="VFD73_20210"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HZI76295.1"
                     /translation="MPSLVDFDRKYRDHGLTIIGIHTPEFPPYSGEHDRGNVARALKQ
                     YGIEYPNAQDNDSRTLNLYGIRYWPSFVLIDKKGIIRYEGAGEFHLHDSTYGTWEQRI
                     RELLAE"
     gene            5043..5945
                     /gene="upp"
                     /locus_tag="VFD73_20215"
     CDS             5043..5945
                     /gene="upp"
                     /locus_tag="VFD73_20215"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: protein motif:HMM:NF001097.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HZI76296.1"
                     /translation="MNARLDPALELPDGSVLRFHSDSISPDSAYFAAPPVALLVGHHP
                     RVHGTLRASVCDSADGVPDCGGGAVTAPGGVTATRSALYFPAMPPPRFPNLTVLSHPL
                     IQHKLTILRDKHTSTRDFKQLVSEIAMLMAYEVTKDLATAPVEIDTPLERTTGIQVSG
                     KKLTLVPILRAGLGMVDGITQLIPSARVGHIGLYRDHETLQPVDYYFKIPSDRVERDF
                     FILDPMLATGGSAVAAVSALKNAGARRIRFLCLVAAPEGVRRMLESHADIPIFAAALD
                     RELNAVGYILPGLGDAGDRLFGTR"
     gene            5948..>7194
                     /locus_tag="VFD73_20220"
     CDS             5948..>7194
                     /locus_tag="VFD73_20220"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HZI76297.1"
                     /translation="MSGSRLTFWGAAGQVTGSMHLLEAAGARILLDAGLFQGRRKESH
                     QLNAHLPFDARRIDSVVLSHAHIDHSGRLPLLVKEGFHGPVYATPATRDLSAVMLADA
                     AQIQEKDYEFLRHHGDGSLESEPLYALRDAIAVQDLVVGVPYRRVFYVRKHLAIEFLE
                     AGHILGSASVDLRITENGNQRLVFSGDVGRSGLPIVRDPEPPSGPIDALIVEATYADR
                     QHGSFTSAETHLADAVRRTAARGGKVLIPAFAVGRAQELIYSLHRLFRDGQIPEIPIY
                     VDSPLAIDITTVFRMHPEVFDRREQMIESTSQLFDFPLLRYVREVEESKTVDANPGPA
                     VIIAASGMAESGRILHHLAHGIGDQRNLVLFVGFQAEHTLGRRIQEGQETVRILGREY
                     QRRAEIESISGYSAHADRTELRA"
BASE COUNT         1360 a         2192 c         2197 g         1445 t
ORIGIN      
        1 tcatctcgct ggatgcccca gcccagcccc cagtagagcg cgctgttgag tctgatctgc
       61 ggggttgtca ttgccttcca ggtggccgga gaaagttgca gcccatcggg tgacgtcccc
      121 gcaacgagac gggtcaggaa cctcgagtaa tccttcactg tcgtcagcag tgagctcgct
      181 gcattgggca ccatatagat gggaagcgtt tgccactgtg ggtttaccag agggacggca
      241 cgggctgcct catcatagcg ccaatcggac agcggcttgc cccaggcttc ggcgatggtc
      301 agcgtccgcc gtccgatagc ggcttgcaca tccagccggt tttcctggcc atcgtacccg
      361 gccgccattc gcgattcgaa gtccggacgc cagacatagc tgctctgctt catcccaagc
      421 ggatcgagca cctgctcgcg catgaaccgg ttgaacggtt ttccggtgac cgcttcgacc
      481 actctttgca gatagaagta tccctcgccc gaatagctga acttctgtcc cggttcgaac
      541 gcgggcgcca acggcccggg ttgctgtcgc cagttgggaa gaccggtcgt gtggctgagc
      601 acgtggcgag gggtcactcg tcgcatgcgg tcgttgtcgg cgtctggaat ggggagatac
      661 tggtagagcg ggcggtcgag atcgagaacc ttagcgtcga ccagtcgcag aactccgtag
      721 gcaaacaacg gcttccccag tgacgcaccc tcgaacagcg tctcggccga cgcatcctcg
      781 gccgggtcct ccactgcctt tccaaagcca cgggtccaga cccgtccacc ctccacgact
      841 cccagcgcga gaccaggcac tgaggataac tccagcaggc gcgggagatt tcgcagcagg
      901 ctggcgttcg gctgccaggt agggcctcgc tgcttcggtc cgcttgccag cagggcctgc
      961 gccggccacg ctgcacgggt atgcacggca cccagaacaa cgcccgctgt tcccatcata
     1021 aagcggcgac ggctcaggaa catcgatgaa gcccccttcg cagacccgac tctcaaccct
     1081 acgggccgga ccatacggcg tttcgtccgg aacctgtcga gccgtacccc ctctagatac
     1141 accggggcaa aaaagggttg cgcgaggtct agctggctcg tttgagggct tgccccacca
     1201 cggacatcat ttcgctcaag gtgaacggct tctcgatggt gagaactcgg ccgaggaggg
     1261 cgacgttgcc caggagatcc agacgcttgg tctgaccgcc cccggacatg gcgatgatgg
     1321 gagtgccagg agtgagactg aggagctcga tgatggtttc gaagccgtcc ttgttcggca
     1381 tgtgaagatc cgtgattacc aggtcggcag ggtgatctct ccagagctgg accgcctcac
     1441 gtccatccgc cgcctgaatg acatcgtagc cggctcggcg aagcagcgtg tcgagcgaac
     1501 ggcgcacacc ggcgtcgtca tcgaccacca tgatccgttg ccgagccccg ctgagcatta
     1561 cgcacacctg atttgaggga tactttggct cgagcaggtc tcgggccagt tgccatcaat
     1621 aggcgccact acgagctaac tgtcccggtc tgccagcggg cctctgccag atgccaaagt
     1681 gttgcgaaaa gcccaattag cggcctggga cgtcaaggcg aatctcattc gctggtgtca
     1741 cctttgcgaa cgtttgatgt gacatcagga aagaaaacga cttagtcgcg gatcaccgtt
     1801 ggtgtgtctg gttcttagac gatttccaaa gcgaatattg gatccatgaa gacctctgat
     1861 gtcagtagtc aggatggagt taaggctacc agggttcgca gcacactgtc tgcttatacg
     1921 gccagtgtct cttcactctc ggagccaggc gtggactcga tcggggtggg acagaacggc
     1981 cggttttgga ctctgctgac tgttgccctc cttgtcttca cgcggagcgc ggcggcccag
     2041 gtggggctgg cgtcgagccc ggccagagtc acgctcgtgg cccatgtccc cgctgccgcg
     2101 tcgatagaag aggcggcaat cgcgcaaacc acagtaggtg caatgcagga gaccactctc
     2161 acggtccacc ttgcggccaa cagcagctat cgtctggtag tgcgcgggac gggctcaggc
     2221 gggcggcgcg tctgggtgcg agcggccgac ggggcatatc atccgctggt caggggagct
     2281 tcggtgacgg tgcttcagga gcggagggca ggaaaggaag ctgagcagga gatctggtat
     2341 cgcaccgaga gcgacggcac tcagtcgagt gacccgtcgc ccccggtgcg ctatgaagtg
     2401 gtggtggatc ccgtcctgta aagtctcgca gtcgaggtct ctacttgacc tcgaaatcct
     2461 tcgattctgt cgatccgttc atcgtcaggg tgacctgata tttccccttc ggccaaccgc
     2521 tgggtttcga gatgtgaaac tcggtggctt cggtgccgtt cggcgcgatg ctccgagtgt
     2581 cctccttgat gacctggccg ccgtccttat aggtccaccg cgcagtcacg gtcgcactcg
     2641 gcgcactgcc ctgagtcacg gccaccgcat agatcgtgtc cttgggagag aacttgtccg
     2701 tggcatcgct cacccgcttg tccgccgaaa gcttacgacc cagctgaacg tcggaaatct
     2761 tgagctcagt cgccgtggca gagctggtgg ccgtgctggc cgtttccgtg ttcttcttgc
     2821 aagccggcgc cagaacgcag gagagcgcga gcaacaagac tgcgtggttg cgtggattca
     2881 tggtcgctct aggcctccgg aatccggatc acttggccgg gatagatcaa gtcggggtcc
     2941 ttgatcgtat cccgattggc ctcatagatc cggtgccact gctgtacgtc gccgtactcc
     3001 cgcttggcaa tcttcgagag actatcgccc ttctgtacgg tatagcttcg ccctgccggg
     3061 ctggacgcgg ttgaagagct tccgctctcc acatccgaaa agtcggcttt cgggcggtca
     3121 ccggatggca tcgctcctcc tcgtaggcgg gtactaaggc gtggacagga cttaaacgtg
     3181 gcaggtcggc cctggcggcg ttgtgactgg gctcacccag ctcgaaagcg tcagcgaaag
     3241 cgccgcactg aggtcgaatg cggtcaaaac cccctccaga tttttgacag cccttctcat
     3301 cggagattgt cgacggcgcc gaaagttttt gtccacagcg tgtgggaatg tggcagtgct
     3361 ggctaagctc atgttggaca tcgccgctaa ctatccacat tgcactcatt gtttccagag
     3421 ttatcccgaa gagaaatggg cgcttgcggg agattgagaa atcctaaaat tgtatgcgcc
     3481 ttcccctgaa ctcctgtggt cacatccgag gtttaccgat gttgcgcgaa gctcgcgtgc
     3541 gacccgagtt cgcacacctc taccctatgc tcgagcctgg tatctgggcc gcggcggcaa
     3601 tggtagccga aagggttgcc gctgtccgcc tccagcagct ggccgacacc tatgtgttgc
     3661 atgatcgagt gctgaccgat gcgcatttcg agtttcgagg aggaacgccc cggcggcacc
     3721 tgccaccgac cgagggtgca gcctgatggg aagctcaagt tcggaggtga agcagccgaa
     3781 gctccgcgac gcaatcagtt catcacggtt tcgtcgcata gccaggagca ttcatgtcag
     3841 cttcgatctt ccgctgggca gtcccactcg ttattaccgg cttctccctc agccactctg
     3901 acaattctct gccgggcttg ccggcgggag caatgaaatt aggtgtcgcc tacttcgagc
     3961 cgccgcggtc catcggaacg ccgattgaag atgtggcgcg cacctacacc ggcttgggcc
     4021 ttgccgacag gatcgaggga cggctgcggc tcgataccga tgtctcgctc gatcggacca
     4081 ctcgggaact gattcgccga aggctcgcgg ccgcgagctg agttggagat cgttactgct
     4141 ccgaaaaaac ggcccagtga tgggccgttt cctttgacga ggcattatgt ccacactggg
     4201 aagatccgct acaaagccag tggccaggga gggaattgaa cccccgacac gcggattttc
     4261 agtccgctgc tctaccaact gagctacctg gccgtagggg cgggaaatat agaaagaggc
     4321 ttggcctcgg ccaagcgatg gagctaaatc acggctcgat tacgaccgtc gctgtcgggt
     4381 cagttggctt tgggtggcaa gcgcaaaggt aggagtcgag tgccttttcc aaggaccctc
     4441 gacttgggag gccagctccg gattggaaca aggaaagctg gctcaacacc aaaggcccgc
     4501 ttcgcttgcg cgatctcaaa ggccgagcgg tcctgctgaa cttctgggtc tacacctgct
     4561 acaattgcac caatagtgcc gtctctggtc gacttcgatc gcaagtaccg ggaccacggg
     4621 ctcaccatca ttgggatcca caccccagag ttcccgccct actcgggtga acatgaccgc
     4681 ggaaacgtgg cgcgagcact gaaacaatac ggaatagagt atcccaacgc gcaggacaat
     4741 gattccagga ccttgaacct ctatggcatt cgctactggc cgagcttcgt gctgatcgac
     4801 aagaagggga tcattcgata cgagggagcc ggtgaattcc acctgcacga ctcgacctat
     4861 ggaacgtggg agcagcgcat cagagagctc ctggccgagt gatgtgcaga cggtacctgc
     4921 tcggggcgtg gctcgggcta ctggccggct gcagaccaag tgacccccag ccggtcagga
     4981 tcgaggccag tcctctggga cgagatacgc ggctcgtgct ccaggtcact tctggtcttc
     5041 gggtgaacgc aaggctcgat cccgccctgg agttacccga cggaagcgtg ctgcgttttc
     5101 actccgactc catcagcccg gactcggcct actttgcggc tcccccggtt gcgctactcg
     5161 tgggccatca cccccgggtc cacggaacgc tgcgtgcaag tgtctgtgat agcgccgacg
     5221 gtgtgccgga ttgtggaggt ggagctgtaa cggcacccgg cggcgtgaca gcgacccgct
     5281 ctgccctata tttcccggcc atgccgccgc ctcgtttccc caatctcact gttctttctc
     5341 accctctgat ccaacacaag ctcaccattc ttcgcgacaa gcacaccagc acccgcgact
     5401 tcaagcaact ggtgagtgag atcgccatgt tgatggcata cgaggtgacc aaggatctgg
     5461 caacggcccc ggtggagatc gacacaccgc tcgaacgcac caccggaatc caggtttccg
     5521 gaaagaagct caccctggtg ccgatccttc gcgccggcct cggcatggtg gatgggatca
     5581 cccagttgat cccgtcggca cgagtgggac acatcggcct ctaccgggat cacgagacgc
     5641 ttcagccggt ggactactac ttcaagattc cctccgaccg cgtcgagcga gactttttca
     5701 ttctcgatcc gatgcttgcc accggcggct ccgccgttgc cgccgtgagt gcgctcaaga
     5761 acgcgggcgc tcgccggatc cgctttcttt gcctggtcgc ggcaccggag ggtgttcgtc
     5821 gaatgctgga gtcgcacgcc gacataccga tctttgccgc cgcgctcgat agagagctca
     5881 atgctgtggg ttacatcctg ccgggattag gcgatgccgg tgaccggctg tttgggacga
     5941 ggtaaaggtg agcggtagcc gcctgacgtt ctggggtgcc gccggacagg tcaccggctc
     6001 gatgcacctg ctcgaagccg ccggagcccg aatcctgctc gatgccggcc tgtttcaggg
     6061 acgcaggaaa gagtcgcacc agctgaatgc tcacctgccg ttcgatgccc gccgcatcga
     6121 cagtgtggtg ttgagccatg cgcacatcga ccacagcggc aggctgccgc tgttggtgaa
     6181 agaaggcttt catggaccgg tgtatgccac ccccgcgacc cgtgatctga gcgcagtgat
     6241 gctggccgac gccgcgcaga tccaggagaa agattacgag tttcttcggc atcatggcga
     6301 tggctccctg gaaagcgagc cgctctacgc cttgcgcgat gccatcgcgg ttcaggacct
     6361 ggtcgtgggt gtgccgtacc ggcgggtgtt ctacgttcgg aaacaccttg ccatcgagtt
     6421 cctcgaggca ggtcacatcc tggggtcggc gagtgtcgac ctgagaatca ccgagaacgg
     6481 caatcagcgg ctggtgttct ctggcgacgt ggggcgcagc ggacttccca tcgtccgaga
     6541 ccccgagccg cccagcgggc cgattgacgc gctgatcgtg gaagccacct atgccgaccg
     6601 gcagcacggt tcgtttacca gtgctgaaac tcatctcgcc gatgcagtgc gacgcaccgc
     6661 agctcgtggc ggcaaggtgc tgattcctgc ctttgcggtc ggacgggccc aggagctcat
     6721 ttacagcctg caccggctgt ttcgcgacgg tcagatccct gagatcccga tctatgtcga
     6781 tagcccgctc gctatcgaca tcacgacggt gtttcgcatg caccccgagg tgttcgatcg
     6841 ccgcgagcag atgatcgaga gcaccagcca gctgttcgac ttccctctgc ttcgctatgt
     6901 ccgggaagtc gaggaatcga agactgtgga cgccaacccc ggccctgcgg tgatcatcgc
     6961 cgcgtccggc atggccgagt ccggccgcat tctccatcat ctcgcgcacg ggattggcga
     7021 tcagcgcaat cttgtcctct ttgtcggttt ccaggcggag cacacgctgg gacggcgaat
     7081 tcaggaggga caagagacgg tgcggattct gggacgggag taccagcggc gagcggaaat
     7141 cgaatcgatt tccggctact cggcgcacgc cgaccgtacc gagctgcgag cgtg
//
LOCUS       DASRPQ010001779         3707 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1142329, whole genome shotgun sequence.
ACCESSION   DASRPQ010001779 DASRPQ010000000
VERSION     DASRPQ010001779.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3707
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1142329"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..2215
                     /gene="glgP"
                     /locus_tag="VFD73_20225"
     CDS             62..2215
                     /gene="glgP"
                     /locus_tag="VFD73_20225"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HZI76298.1"
                     /translation="MLTPQTRIPYLPARVEGLATLAMNLWWSWSREARSLFQSIDVSL
                     WHRTRHNPLELLCRVDPARIAACASDSEFLRRYDDVMERMAHEANTGDTWFAHTYPDL
                     NGKPVAYFCAEFGLHNSVPIYSGGLGVLAGDHCKAASDLGVPMVGVGLFYRKGYFDQR
                     LTPEGWQEDSDEEYDVSSTPLLPVSAAGRQPWLTTVQTSGRPVHVRAWQMMVGRVPIY
                     LLDTNLEANHPDDRGLMNKLYAGGPELRLRQEWILGVGGVRVLRAMGIDPGVWHANEG
                     HAAFMLIERLRELMVAGTSYQDAVHQVRAQSVFTTHTPVPAGHDAFPSDQLEACTGPL
                     WEEMGIDRDTLLHIGAHPAIPGQFHMTVVAMRLSGRVNGVSRRHGQLTRNLWRDLWPN
                     RPWETVPVTHVTNGVHLATWMASPIMALLDEHLGPNWGERLEDPELWDQVLTLDHAKF
                     WEAHRRQKFALAGFVREDARRRFAGQLKEASQVVGAGTLLDPMAFTIGFARRFATYKR
                     ANLIFRDIERLRRLLVDPWRPIQIIFAGKAHPADNPGKEVLQSVYQFTRDPAFEGRVA
                     FLEDYDMHLAHLLVQGVDLWLNLPRVPLEASGTSGMKAALNGVPQLSTLDGWWQEGYD
                     GLSGWAISPTAEGSDADAADAEDFYRLLEEQVVPLYYTRNAQGIPLGWVEKMRHALRL
                     AGSRFTARRMMREYVEEYYVPAIQGEASGDDPPTA"
     gene            2225..>3707
                     /locus_tag="VFD73_20230"
     CDS             2225..>3707
                     /locus_tag="VFD73_20230"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: protein motif:HMM:TIGR02095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004373 - glycogen (starch) synthase
                     activity [Evidence IEA];
                     GO_function: GO:0009011 - starch synthase activity
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase"
                     /protein_id="HZI76299.1"
                     /translation="MAIVHPPARERTELLGTETGQPVSVVHITAEYYPYARTGGLAEA
                     VSGLANFQRAAGLNVAAVLPLYRTVRDVDPDLEPVGQPFMVPMGGRNEEARVFRVAGP
                     VSGPQVFFIEHLDYFNRPGIYGENAVDYLDNARRFAFFAHAAVIALPRLMPGAVLLHV
                     HDWHTALALVYLRTSARQPQHVSTVLSVHNPGYQGHFPPDVMPQIGLSWELYNWRQLE
                     WYGKVNFLKGGLAFADFVTTVSPTQAEELRTAGGGFGLHDMFIWLGERLVGVLNGIDR
                     RAWDPANDPQITAQYSAENLEGKRRCKAALQRSFGLPQRRKVPLFGMTGRMVTQKGLD
                     LILQSGELLTMDAQFVFLGSGEAKYEAALVDLASSAPDRIGVQLDFTDRLEHRLMAGA
                     DLFLMPSLYEPCGLTQMRAQRYGSPPIVRHVGGLADTVEDEVTGFVFDPYTPEAFQEA
                     TYRALDTFRHPSKWHGIMRQGMARDFSWERSVATYLDVYRRAVA"
BASE COUNT          677 a         1166 c         1182 g          682 t
ORIGIN      
        1 cgaattcgtc acatataccc gaacgctgcc ccgctgcccc actgccccgc tataattggc
       61 catgcttacc ccgcaaaccc gcattcccta tctccctgcc agggtcgagg gcttggctac
      121 cctcgcgatg aacctatggt ggagctggag ccgcgaggcg cgcagtctgt tccagtccat
      181 cgacgtgtcg ctctggcacc ggacgcgcca caacccgctc gaacttttgt gtcgggtcga
      241 ccccgcccgc attgcggcct gcgccagtga cagcgagttc ctccgtcgct acgacgacgt
      301 gatggagcgc atggcccacg aggcaaatac cggagacacc tggtttgcgc acacctaccc
      361 ggacctcaac ggcaagcccg tggcctactt ctgcgccgaa ttcggcctgc acaattcggt
      421 gccgatctat tcgggaggac tgggggttct tgccggtgat cactgcaagg cggcgagcga
      481 ccttggagta ccgatggtgg gcgtcgggtt gttctaccga aagggctact tcgatcagcg
      541 gctgactccg gaaggatggc aggaggacag cgacgaagag tacgatgtca gctctacccc
      601 tctgctgccg gtcagcgcgg ccggccggca accatggcta accacagttc aaacctccgg
      661 tcggccggtt cacgttcgag cctggcagat gatggtgggc cgggttccga tttatctgct
      721 cgacaccaat ctggaggcga atcacccaga cgaccgcggt ttgatgaaca aactctatgc
      781 cgggggcccg gagctgcgtc tccggcagga atggattctc ggcgtcggcg gtgtgcgagt
      841 cctccgggca atggggatcg atcccggggt gtggcacgcc aacgaggggc acgcggcatt
      901 catgctgata gagcggctgc gcgagttgat ggtggccggc acgagttacc aggatgccgt
      961 tcaccaggtc cgggcgcaga gtgtcttcac cacgcacacg ccggttccag ccggtcacga
     1021 cgcgtttccc tccgaccagc tggaagcgtg caccggaccg ctatgggaag agatgggcat
     1081 cgatcgtgac acgcttctcc atatcggtgc gcacccggca attcccggtc agtttcacat
     1141 gacggtggtc gcgatgagac tgtcgggtcg ggtcaacggt gtgtcccggc gtcacggcca
     1201 gctgacccgg aatttgtggc gggacctctg gcccaaccgt ccctgggaaa ctgtcccggt
     1261 cactcacgtc accaacggtg ttcacctggc cacctggatg gccagtccga tcatggcgct
     1321 cctcgacgag cacctgggac cgaattgggg agagcggttg gaggacccgg agctctggga
     1381 tcaggtgctc actctggatc acgccaaatt ctgggaggcc catcggcgac agaaattcgc
     1441 gctggccggc tttgttcggg aagacgcacg tcgcagattt gccggacaac tcaaggaggc
     1501 atcgcaggtg gtcggggccg ggacgttact cgacccgatg gcgttcacga tcgggtttgc
     1561 ccgccggttt gccacctaca aacgggccaa tctgatcttc cgagacatcg aacggctgcg
     1621 ccgcctgctg gtggacccct ggcgtcccat ccaaatcatc ttcgccggca aagctcaccc
     1681 ggccgacaat ccaggcaaag aagtgctgca gagcgtctac caattcaccc gcgatccggc
     1741 gttcgagggt cgggtggcgt tcctggaaga ctacgacatg cacctcgcac acctcctggt
     1801 gcagggcgta gatctctggt tgaacctccc gcgggtccct ctggaggcat caggcaccag
     1861 cggcatgaag gccgcactca acggtgtgcc gcaactcagc acgctcgacg gatggtggca
     1921 ggaaggctac gatggcctga gcggctgggc catttccccg accgccgagg gaagcgatgc
     1981 cgatgcagcc gatgcggagg acttctaccg cttgctcgaa gagcaggtcg tcccactcta
     2041 ctatactcgg aacgcccagg gaatcccgct cggctgggtg gaaaagatgc gccacgcgct
     2101 tcgcctggcg ggaagcaggt tcaccgcgcg acggatgatg cgagagtacg tggaagagta
     2161 ttacgtaccg gcaattcagg gagaggcgtc gggggacgat ccgcccacgg cgtaaggcac
     2221 caggatggcg attgtacacc caccggcacg ggaaagaacg gagttgctag ggaccgagac
     2281 ggggcagccg gtctccgtcg ttcatatcac cgccgagtac tatccctatg ccaggaccgg
     2341 agggctggcc gaggcggtga gcggcttggc caatttccag cgggccgccg ggctgaacgt
     2401 ggcggcggtg ctcccgctgt atcggacggt gcgggatgtc gatccggatc tggagccggt
     2461 tgggcagcca ttcatggtgc cgatgggcgg gcggaatgag gaggcccggg tgtttcgggt
     2521 ggccggaccg gtcagcggac ctcaggtgtt cttcatcgaa caccttgact acttcaaccg
     2581 ccccggaatt tacggcgaga acgcggtcga ttacctcgac aacgcacggc ggttcgcctt
     2641 ttttgctcac gctgcggtca tcgccctgcc ccgcctgatg cccggtgcgg tgttgctcca
     2701 cgtccacgac tggcacacag ctctggcact ggtgtacctc cggaccagcg ccaggcaacc
     2761 ccagcatgtg agcaccgtcc tttcggtcca caatccggga taccagggac actttccacc
     2821 cgatgtgatg ccccagatcg ggctctcctg ggaactgtac aactggcgcc agctggagtg
     2881 gtacggcaag gtaaacttcc tcaagggcgg tctcgccttc gctgacttcg tcaccaccgt
     2941 gagccctacc caggcggagg agctgcgaac tgcgggcggc ggcttcggcc tgcacgatat
     3001 gttcatctgg ctgggcgaac ggttggtcgg tgtgcttaac gggatcgatc gccgggcctg
     3061 ggatccggcg aacgatcccc agatcactgc ccagtactcg gccgaaaatc tggaaggcaa
     3121 gcggcgctgc aaggcggcac tgcagcgatc attcggtctg ccgcagcggc gcaaggtccc
     3181 cctcttcggg atgaccggca gaatggtcac gcagaaaggg ctcgatctca tcctgcagag
     3241 cggagagctc ctgaccatgg acgcgcaatt cgtcttcctc gggagtggcg aggccaagta
     3301 cgaagccgcc ctcgtggatc tcgcctcctc cgcgccggac cggatcggcg tgcaactcga
     3361 tttcaccgac cgcctggagc acaggttgat ggcaggcgct gacctttttc tgatgccctc
     3421 gctctatgag ccgtgcggtc tcacccagat gcgggcacag cgatacgggt cacctcccat
     3481 cgtgcgccac gttggtgggc tggccgatac ggtagaagac gaggtgaccg gttttgtgtt
     3541 cgacccctac acgccggaag ccttccagga ggcgacctac cgagccctgg atacctttcg
     3601 ccatccttcc aagtggcacg gaatcatgcg ccagggtatg gcgcgagatt tcagttggga
     3661 gcgctcggtg gccacctacc tcgatgtcta ccgccgggca gtcgccc
//
LOCUS       DASRPQ010001780         1271 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_518104, whole genome shotgun sequence.
ACCESSION   DASRPQ010001780 DASRPQ010000000
VERSION     DASRPQ010001780.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1271
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_518104"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(189..755)
                     /locus_tag="VFD73_20235"
     CDS             complement(189..755)
                     /locus_tag="VFD73_20235"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI76300.1"
                     /translation="MPNDMQEAVALAHLSVATGSGDDDEEVSIPWPAVSDGMPRLLPV
                     PSAWWETPAVTTRALSARPEEARTARRFVREMLTCWGLEALADDAEMIVDELVVNAVL
                     HGTRAGLTRPGLGTGLTVLRLCMLRRAGEVMLAVVDPGNETPMPRQPDWGGESGRGLQ
                     IVGALSHVWGWSPIAGHGKAVWAVLRDP"
     gene            998..1255
                     /locus_tag="VFD73_20240"
     CDS             998..1255
                     /locus_tag="VFD73_20240"
                     /inference="COORDINATES: protein motif:HMM:NF016070.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF397 domain-containing protein"
                     /protein_id="HZI76301.1"
                     /translation="MVITYNGMLAAELGEVCWQKSWHSNPNGECVELAALPTGEIAMR
                     NSRFPAGPVLLYTQAEITAFLAGAKDGEFDHLAGGANNLTR"
BASE COUNT          242 a          421 c          397 g          211 t
ORIGIN      
        1 cgaagacgtg aggatggccc tggacctcga gccagacatg cccatcgtgc tgtgcgacgc
       61 acgcagcaag gagtcggcca aggatgtcct catcgctctg gtcgagcacg tcctcgtgac
      121 cgcgtccgag gagccgctct cagggatcgc ctagttgcgg ggccgtgagt ctcacggatt
      181 acggagtctc agggatcacg gagcacggcc cagaccgcct tgccgtgccc ggcgatgggg
      241 ctccagcccc agacatgact aagcgcgccc acgatctgca ggccgcgccc gctctccccg
      301 ccccagtcgg gttgcctggg catgggcgtc tcgttgcccg gatccaccac cgccagcatg
      361 acctcgccgg cccgcctgag catgcacagc cgcagcacgg tcaggccagt gcccaggccg
      421 ggccgggtca ggcccgccct cgtcccgtgc aggacggcgt tgaccaccaa ctcgtccacg
      481 atcatctcag cgtcgtcggc cagcgcctcc aggccccagc aggtcagcat ctcccggacg
      541 aaccggcggg cggtcctggc ttcctccggc cgggcgctca gtgcgcgggt cgtgaccgcc
      601 ggggtttccc accaggctga gggcacaggc agtagccgtg gcatgccgtc actgaccgcg
      661 ggccagggga tgctgacttc ttcgtcgtca tccccgctac cggtagcgac actgagatgc
      721 gccaacgcaa cagcttcctg catgtcattg ggcacgaaaa cgcttgccca tcacggtgtt
      781 aactgcgtgc tcgaagacat gttgcctgat atattgtgca aatgcaagac cggatgcacg
      841 ttcattcgct ttgtgcacag gtctccggat aggcgcagag ggggccggca gacaggcaga
      901 acgcatcagg caacttgctc accagttgct aactggagat tacagcgagt gaatggaaaa
      961 ggcctgacac gcgttaccct gtcggaaggg gataaacatg gtcattacct acaacggcat
     1021 gctcgccgca gagctcgggg aggtctgctg gcagaaaagc tggcatagca acccgaacgg
     1081 ggagtgcgtc gagctagccg cgctgccgac cggtgagata gcgatgcgca actcccgttt
     1141 cccggcaggc cctgtcttgc tctacactca ggcagagatc accgcattcc tggcaggagc
     1201 caaggatggg gagttcgacc acctagccgg cggagcgaac aaccttaccc gctagtagca
     1261 gcgtaccgtc c
//
LOCUS       DASRPQ010001781         1018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2396258, whole genome shotgun sequence.
ACCESSION   DASRPQ010001781 DASRPQ010000000
VERSION     DASRPQ010001781.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2396258"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..502)
                     /locus_tag="VFD73_20245"
     CDS             complement(<1..502)
                     /locus_tag="VFD73_20245"
                     /inference="COORDINATES: protein motif:HMM:NF020496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HZI76302.1"
                     /translation="MTRSTGVSAIRFEATLHTIGKWTILRLPEKASEQLPSRGQVAVL
                     GTINGHEFQTVLEPDGCSGHWMRVDEKLQRTAAISAGDTAALEIEPARDWPEPNVPQD
                     FETALATAPQKIQDLWNDITPMARWEWVRWVNATKNPDTRSRRVEVSISKMNSGKRRP
                     CCFNLAA"
     gene            complement(570..>1018)
                     /locus_tag="VFD73_20250"
     CDS             complement(570..>1018)
                     /locus_tag="VFD73_20250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76303.1"
                     /translation="PPTGCPPGPSWSQEVLPLGNPAIWWVSIPAALFCLGWWLTRRDW
                     RAGASLLGIIAGWLPWFLFLKRTPQFDYYSLVFLPFLVLCITLCLGLIIGPARASPRR
                     RATGAAIAGTYVLAVLMLFWYFYPILAGQIIPHSSWFARMWYRGWI"
BASE COUNT          190 a          324 c          326 g          178 t
ORIGIN      
        1 aagcggcgag gttgaaacag cagggccgtc gcttcccgct gttcattttc gagatactta
       61 cttcgactcg tcggcttcgc gtgtcagggt tcttggttgc atttacccag cgaacccatt
      121 cccagcgcgc catcggcgtg atgtcgttcc ataggtcctg gatcttctgc ggggcagtcg
      181 ccagagctgt ctcgaaatcc tgtggcacgt tcggctccgg ccagtctctg gctggctcaa
      241 tctcgagcgc tgcagtgtca cccgcgctta tggccgcggt tcgctgcagc ttttcatcga
      301 ccctcatcca gtggcccgaa cagccgtcgg gttccagtac tgtctggaac tcatggccat
      361 tgatcgtccc tagtacggcc acctggccac gcgatggaag ctgctcgctt gctttctcgg
      421 gcaaccgcaa gatagtccat ttgccgatcg tgtgcagcgt ggcctcaaaa cgaattgccg
      481 agacccctgt gctccgagtc atcgattcat tatagcgaag ggatttcgcc tcagccggac
      541 cgcttgcccg tgccggtgag gcggtggggc tagatccagc cccggtacca catgcgggcg
      601 aaccacgacg agtgcgggat gatctgaccc gcgaggatcg gatagaagta ccagaacagc
      661 atcagcaccg caagcacgta cgtcccggcg atagcggccc cggttgcccg gcgccgcggg
      721 ctcgctcggg ccggcccgat gatcagcccc aggcagagcg tgatgcacag caccaggaac
      781 gggaggaaaa ccagcgagta gtagtcgaac tggggcgtcc gcttgaggaa caggaaccag
      841 gggagccagc cagcgatgat gcccaggagc gacgcgccgg cccgccagtc gcggcgagtc
      901 agccaccagc cgaggcagaa cagcgcggcg gggatcgaca cccaccagat cgccgggttg
      961 cccagcggga ggacctcctg ggaccacgac gggccaggag ggcagcccgt cggggggc
//
LOCUS       DASRPQ010001782         1949 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2751600, whole genome shotgun sequence.
ACCESSION   DASRPQ010001782 DASRPQ010000000
VERSION     DASRPQ010001782.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1949
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2751600"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..912
                     /locus_tag="VFD73_20255"
     CDS             <1..912
                     /locus_tag="VFD73_20255"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HZI76304.1"
                     /translation="DQVNLPQPGSGEVRVRLEGCGVCGSNLPAWEGHSWFQYPTEPGS
                     PGHEGWGTIDALGEGVTGLAVGQRVAALAYRSYAEYDIAGAHAVVRLPDQLAGQYFPG
                     EPLGCAVNIYRRSDVESGQTVVIIGIGFLGAILTRLVSRVGARVIAISRRPFALEIAR
                     EMGADVCLPLDNPERIISDVQQLTKGQGADRVIEAVGSQWPLDLAGELTRIRGRLIIA
                     GYHQDGPRQVNMQMWNWRGLDVVNAHERDPAVYMEGIRGAVEAVASGVLNPSRLYTHT
                     FPLEQIDRAFRVMEERPDGFLKALVLT"
     gene            909..1949
                     /locus_tag="VFD73_20260"
     CDS             909..1949
                     /locus_tag="VFD73_20260"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HZI76305.1"
                     /translation="MKPRVGCLGVGWIGRNRLEALLRSGLVEVIGIVDSVEANARAAA
                     ELASCTTVSSLDELLDLDPAGLVIATPSALHAEQAEAALARGVAVFCQKPLARTAAET
                     SHVIELASKTNTLIGVDLSYRFLEAATRARALVRSGELGSIYAADLVFHNAYGPDKPW
                     FYDPALSGGGCVIDLGIHLVDLLFWTLGPPDPSIVTSQLFAGGKPLPAAPSAVEDFAL
                     AELRFDNGLVARLACSWNLSAGQDAVIEATFYGTRGAVRLSNVNGSFFDFRADRFRGT
                     TRECICEPPDDWGGRAIVDWARGLAGGSGFDPSARELVTVAKVLDAIYGRPPSSSSQS
                     QNRRMQELVELA"
BASE COUNT          333 a          583 c          647 g          386 t
ORIGIN      
        1 gaccaggtca atctcccaca gccgggatct ggtgaagttc gggtgcgact ggaagggtgc
       61 ggcgtctgcg gttccaacct tccagcatgg gaaggccatt cctggttcca gtatcccaca
      121 gaaccaggca gtcccgggca cgaaggctgg ggcacaatcg acgcgctggg cgagggcgtc
      181 accggcttgg ccgtcggcca aagagttgcc gcactggcct atcggtcgta cgcagagtac
      241 gacatcgccg gcgctcatgc cgtcgtgcga ctgccggacc agttggccgg ccaatatttc
      301 cccggagaac cgttgggatg tgcggtgaat atctaccgcc gctccgacgt tgagtccggc
      361 cagaccgtag tcatcatcgg catcggcttt ctcggtgcca ttctgacccg gctggtgagc
      421 cgggtcggag cccgggtcat cgcaatctct cgtcggccgt ttgcgctcga gattgcgagg
      481 gagatgggtg ccgacgtctg cctgccgctc gacaatcctg agcgaatcat cagtgatgtc
      541 cagcagctga ccaagggaca gggtgccgat cgcgtcatcg aagcggtcgg ttcccagtgg
      601 ccgctcgatc tggccggcga gctcacccga atccgcgggc gtctcatcat cgccggctac
      661 caccaagacg gccctcggca ggtgaacatg cagatgtgga actggcgggg gctggatgtg
      721 gtgaacgctc acgaacgcga tccggcggtt tacatggaag ggattcgcgg agctgtcgaa
      781 gcagtcgcca gtggcgtgct caatccgtct cgtttgtata cccacacgtt ccctctggag
      841 cagatcgacc gagcgtttcg ggtgatggag gagcggccgg atggtttcct caaggctctg
      901 gtgctgacat gaagccgcgg gttgggtgtc tgggtgtggg ctggattgga cggaaccggc
      961 tggaagcgct gttacgcagc gggttggtcg aggtcattgg tatcgtcgat tcagtcgagg
     1021 ccaatgccag agcggcagct gagctggcct cctgtaccac cgtgagctca ctcgacgagt
     1081 tgctcgatct ggatccggca gggctggtga ttgccacgcc cagcgcactg catgccgagc
     1141 aggcagaggc agctctcgcg cgaggggtag cggtcttttg tcaaaaaccg ctcgcccgaa
     1201 ccgcagcgga gacgtcgcac gtcatcgagt tggccagcaa gacgaacaca ctcatcggcg
     1261 tggatttgtc gtatcgcttc ctggaagccg ccactcgagc ccgagctctg gtccgctccg
     1321 gtgagctcgg ctccatctac gccgcggatc tcgtcttcca taacgcctac ggtccagaca
     1381 agccctggtt ctatgatccg gcgctctcgg gaggcggttg cgtcatcgac ctgggcattc
     1441 atctggtcga tttgctgttc tggacgctgg gaccgccgga tccgagcatc gtgaccagtc
     1501 agctgttcgc cggcggcaag ccgttgcctg cagcgccgtc cgccgtggag gacttcgcct
     1561 tggctgagct ccggttcgac aacggcctcg tcgcgcgtct cgcctgttcc tggaacctct
     1621 cggcaggcca ggacgcggtg atcgaagcga cgttctacgg tactagagga gccgtccgcc
     1681 tgagcaacgt caacggctcg ttcttcgatt tccgagccga tcgatttcgg ggaaccactc
     1741 gggaatgcat ctgcgaaccg cccgatgact ggggaggccg agccattgtg gactgggctc
     1801 gggggttggc cggcggaagt ggtttcgacc cctcggctcg tgagctggtg acggttgcaa
     1861 aggttctcga cgcgatatac gggcgacccc cctcgagttc gagccagtct cagaaccgca
     1921 ggatgcagga actggtggag ctcgcgtag
//
LOCUS       DASRPQ010001783         1079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2116609, whole genome shotgun sequence.
ACCESSION   DASRPQ010001783 DASRPQ010000000
VERSION     DASRPQ010001783.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2116609"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(477..1049)
                     /locus_tag="VFD73_20265"
     CDS             complement(477..1049)
                     /locus_tag="VFD73_20265"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI76306.1"
                     /translation="MEPAVAEARAQHPDKPIEVWATDEHRIGLKPIIRRVWAPKGQRP
                     IALGHHRYKWLYVTAFVQPTSGEVFWSISNGVSKPFFAALLALFAREAGAGRERIIVL
                     ELDSAGWHTAPNLVVPEGLRLAYLPPYSPELQPAEHLWPVLDEPLANQYFGTLADLEH
                     VVTERCRVLNGDQLSLGTNFHWWPKPATPC"
BASE COUNT          180 a          332 c          358 g          209 t
ORIGIN      
        1 acgcagttct ggattggatg cagctctcgc tggacaaatc cgagcgggca caagccgagc
       61 tgagcaacaa ggggatcgac atgcgaccag cataagtcgg tccaggggcg ctatggcgga
      121 cccgacctat tatcggcgcc gcttatgccc ggagcccggg ggagggtccg ttcagcttgc
      181 tttctcggct cccgcttgcg ttttgacctg ggagccagga ggggtgagtt tcttccaccg
      241 cttccatgac ggtcgtcgac gtgccttgca ggccatgtct actctcctgt tcgatcgcgg
      301 ctggaggcgt tgctcagctc tgcgcaaaga cttctcggta ggaaacgggc ggcgatcaag
      361 actcgacgcg ctctggctct gcttgcctga gaggctattc gggtggtgtc ctttgtcaga
      421 taacgctgcg acgcccaccc gcgtgtccct cggtatctca tacgatctcc ggctgattag
      481 cacggggtgg ctggcttggg ccaccaatgg aagtttgtcc cgaggctgag ctgatcgcca
      541 ttgagaacgc gacagcgctc ggtcacgacg tgctcgagat cagcaagcgt cccgaagtac
      601 tggttggcga ggggctcgtc gaggacgggc cagaggtgtt cggcgggctg aagctcgggc
      661 gagtacgggg gcaagtaggc gagccggagg ccctccggca cgaccaggtt gggcgcggtg
      721 tgccagccgg cgctgtcgag ctcaagcacg atgatgcgct cccgtcctgc cccggcctca
      781 cgcgcaaaca gcgccagcag cgcggcgaag aacggcttgg agaccccgtt cgagatggac
      841 cagaacacct cgccggaggt cggctgcacg aaggcagtca cgtacaacca cttgtaccgg
      901 tggtggccga gcgcgatcgg ccgctgacct ttgggcgccc atacccgccg gatgatcggc
      961 ttcagcccga tgcggtgctc atccgtggcc cagacttcga tcggcttgtc cgggtgctga
     1021 gctctcgcct cagcgacggc cggctccagc tttttttaaa tgcctcctgc tcctcgggc
//
LOCUS       DASRPQ010001784         1286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_217363, whole genome shotgun sequence.
ACCESSION   DASRPQ010001784 DASRPQ010000000
VERSION     DASRPQ010001784.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217363"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1021
                     /locus_tag="VFD73_20270"
     CDS             <1..1021
                     /locus_tag="VFD73_20270"
                     /inference="COORDINATES: protein motif:HMM:NF038032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CehA/McbA family metallohydrolase"
                     /protein_id="HZI76307.1"
                     /translation="PASTPGTLIVHDQEYHTSYWGHSGLLGLREHLILPGYAGYANTA
                     AASLYPTNAAVMDLARRQGGVTGYVHPFDSYPNPWDSLKPLTDELPVDAALGKVDYYE
                     ALGFVDDYLPTARVWYQLLNCGFRIPAGAGTDAMANYASLRGPVGLNRVFVKSGAPLE
                     HRRWLDSLKAGRSFATNGPLLGFTLENRELGDELRLPDGGSDVTARVTLHSIVPIDTL
                     EIVRNGAVAATVPLTENRTDVALAIKLAIHESGWYLLRARGSRPVYPILDFYPYATTS
                     PIYVTVGGRPIRSPVDAKYFIAWIDRLEAGATAHQGWNSSAERTATLESIRQARAVFQ
                     RQLEQ"
     gene            1018..>1286
                     /locus_tag="VFD73_20275"
     CDS             1018..>1286
                     /locus_tag="VFD73_20275"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HZI76308.1"
                     /translation="MSRRAQRLWLLLLSLAPLPGYAQTPAERPRLVVVVSIDQFRADY
                     LQRFSRFFGPGGFNLLLQRGANFTEAHYQHSTTQTCPGHAVILTG"
BASE COUNT          231 a          419 c          397 g          239 t
ORIGIN      
        1 tcccgcctct acaccgggta cgctcatcgt gcacgatcag gagtatcaca ccagctactg
       61 gggccacagc ggcctcctgg gcctgcgtga gcacctgata ttgccgggct atgccgggta
      121 cgcgaacacc gccgcggcga gcctctatcc aaccaatgca gcggtcatgg acctggcacg
      181 ccggcagggc ggcgtgaccg gctacgtgca tcccttcgat agctatccca atccttggga
      241 cagtctgaag ccgctgacgg atgagctgcc ggtcgacgcc gctttgggaa aggtggacta
      301 ctacgaggcg ctcgggttcg tcgacgacta tttgcctacc gcacgggtct ggtaccagct
      361 cctgaactgc ggcttccgga taccggcggg agccggcacg gatgccatgg ccaactatgc
      421 ctcactccgc ggaccggtcg ggctcaatcg ggtgttcgtg aagagtggcg ctcctctgga
      481 gcaccgccgc tggctcgact cgctgaaggc ggggagaagc tttgcgacca acggcccgct
      541 gctcggattc actctggaaa atcgggaact gggtgacgag cttcggctac ccgacggagg
      601 gagcgatgtc acggcgcggg tgaccctcca ttccattgtg cccatcgata ctctcgaaat
      661 cgtccggaac ggggccgtcg ccgcgactgt ccctctcacc gagaacagga ccgatgtggc
      721 gctcgcgatc aagctcgcga tccacgagag cgggtggtat ctgttgcggg cacgcgggag
      781 tcgtccagtc tacccgattc tggattttta tccctacgca accaccagtc cgatctacgt
      841 caccgtcggg ggaagaccga ttcgctcgcc ggtggacgcc aaatacttca ttgcctggat
      901 cgaccgactg gaagcgggag cgacggccca ccagggctgg aacagctcgg ctgaacgaac
      961 tgcgacgctc gaaagtatcc ggcaggcccg agctgtgttt cagcgacagc tggagcaatg
     1021 agccggcgcg ctcagcggct ctggctcctg ctgctctcgc tggcgccgct tccgggatac
     1081 gcccaaaccc ccgccgagcg accgcgattg gtcgtggtgg tttccatcga tcagtttcgc
     1141 gccgactact tgcagcgttt ctccaggttc ttcggtcctg gaggattcaa tctgctgctg
     1201 caacgcgggg cgaacttcac cgaggcgcac taccagcaca gtacgactca gacctgcccc
     1261 ggccatgccg tcatcctgac cggcag
//
LOCUS       DASRPQ010001785         1476 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1143556, whole genome shotgun sequence.
ACCESSION   DASRPQ010001785 DASRPQ010000000
VERSION     DASRPQ010001785.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1476
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1143556"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..455
                     /locus_tag="VFD73_20280"
     CDS             <1..455
                     /locus_tag="VFD73_20280"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HZI76309.1"
                     /translation="TERMRPPAVFAFTQGLDSPASVQGSAIDHLPVIARVKVRPGQLE
                     GFTTQAAEILRLAQEKDTQTLRYDWFLNEDKTDCEVHEAYRSEEGLIEHSQHVVEVRD
                     AWFRDYAFDHRMSVYGEISQHLSDLFNKHAGGVSKFSLVQGLEQAAPV"
     gene            534..1055
                     /locus_tag="VFD73_20285"
     CDS             534..1055
                     /locus_tag="VFD73_20285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76310.1"
                     /translation="MDAEQGKDMRTGGVPALNIERIYSTTVPAEELARALADHFRAQE
                     FEAQVFRASGDRTVMQARNESLWRHLLGVAYALTVVFTPGDAQLSIGLGGPRVGRYGH
                     QRGDRARGGPAGAAGDRLRHLEGEPARPGGLASNRRTDQRASGRVAPSSKDSVRAGGE
                     EDVRDSRAPVPPG"
     gene            1024..>1476
                     /locus_tag="VFD73_20290"
     CDS             1024..>1476
                     /locus_tag="VFD73_20290"
                     /inference="COORDINATES: protein motif:HMM:NF016413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LURP-one-related family protein"
                     /protein_id="HZI76311.1"
                     /translation="MIRERLFRLGEDSDITDQAGQPVLHVDGKVLSLRNRLILQDPAG
                     REVGQVNRKLSALRPTYEITIDGKDVAEVRKHLFTPFGERFTIDVRGAGGMEIDGDLF
                     SHEFTIQRDGHTVATISRRWLTMTASYAVEVAPGEDDLLILASVLALDL"
BASE COUNT          293 a          463 c          500 g          220 t
ORIGIN      
        1 tcaccgagcg gatgcgacca ccggcggtgt tcgcgttcac ccagggactt gactcgccgg
       61 cttctgttca gggaagcgcc atagaccatt tgccggtcat cgctcgtgtg aaggtccgcc
      121 caggccagct cgaggggttc acgacccagg cggccgagat cctccgactg gcgcaagaga
      181 aggacaccca gacccttcgg tacgactggt tcctcaacga ggacaaaacc gactgcgagg
      241 tgcacgaggc ctaccgcagc gaagaagggc tcatcgagca cagccagcat gtcgttgagg
      301 tgagggacgc atggttcagg gactatgcct tcgaccaccg catgagcgtt tacggcgaga
      361 tctcgcagca cctcagcgac ctgttcaaca agcacgccgg aggagtaagc aagttctccc
      421 tcgtccaggg gctggaacag gccgcacccg tctagccact ccagagcggc gaccacccac
      481 gtggccgcgc ttagatcgac cgttcgggcg tagtcatgaa gcggaggaaa gaaatggacg
      541 cggagcaggg caaagacatg cgaaccggcg gagtgccggc gctgaacatc gagcggatct
      601 acagcaccac tgtcccggcg gaagagctcg cccgggcgct ggcggaccac ttccgcgcgc
      661 aggagttcga ggcacaggtc ttccgcgcca gcggggaccg cacggtgatg caggcgcgca
      721 acgagagcct gtggcgccat ctgctcgggg tcgcctacgc gctgaccgtt gtcttcaccc
      781 cgggggatgc tcagctgagc atcggcctgg gggggccacg agtgggtcga tacggccatc
      841 agcggggcga tcgggctcgt ggcggtcccg ccggtgctgc tggggaccgc ctacggcatc
      901 tggaaggaga accagctaga ccaggaggtc tggcaagtaa cagacgaacg gaccagcgtg
      961 ccagcggcag ggtagcgcca agcagcaaag acagcgtgag agctgggggt gaggaagatg
     1021 tacgtgattc gcgagcgcct gttccgcctg ggtgaggact ccgacatcac cgatcaggcc
     1081 gggcagccgg tgctgcacgt ggacggcaag gtgctgagcc tgcgcaaccg gcttatcctc
     1141 caagatccgg ccgggcgcga ggtcgggcag gtgaaccgca agctatccgc gctgcgcccc
     1201 acgtatgaga tcaccatcga cggcaaggac gtggcggagg tgcgcaagca cctgttcact
     1261 cccttcgggg aacggttcac tatcgatgtc cgcggcgccg gcggcatgga gatcgatggc
     1321 gacctgttca gccacgaatt caccatccag cgggacggcc ataccgtcgc gaccatctcc
     1381 agacgctggc tcaccatgac cgcaagctac gcggtcgagg tcgcgcccgg cgaggacgac
     1441 ttgctgatcc tggccagcgt cctcgcgctg gacctg
//
LOCUS       DASRPQ010001786         1032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1803006, whole genome shotgun sequence.
ACCESSION   DASRPQ010001786 DASRPQ010000000
VERSION     DASRPQ010001786.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1803006"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            329..>1032
                     /locus_tag="VFD73_20295"
     CDS             329..>1032
                     /locus_tag="VFD73_20295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZI76312.1"
                     /translation="MFLRRTLRKKDGKQHRYWSVVENRRVAGERVVQKRLLYLGEIND
                     SQELAWRKSIEILDEGCDRRRTLALFPEDRCDGVLPDAAIVRLKLSELRLCRPRQWGA
                     CWLALRLWEELRLDRFWAERLAPSRKGTRWDQVLFVLVAYRLLEPGSEWRLHRQWFER
                     TALADLLGADFGLAEIHKLYRCHDRLLEHKPALFNHLTSRWRDLFNVRFDVLLHDLTS
                     TYFEAEPPFPEGDKRR"
BASE COUNT          167 a          299 c          357 g          209 t
ORIGIN      
        1 tccggacgtg acgcgggtga cactgcacgg cggcgtctgc ccccccactg cgccaagtgc
       61 ttaagggcgg aggcgccggc ggggctggaa ctgggctcgc cgttcggctc caacctgcgc
      121 gccttcgtgc tgtacctgcg cttcggctag gcgatctccc gttagccgat cttcgccgat
      181 tcgaccgtga tttgagccgt tctcgagttt tttgttggct aaaccattga tgtgacgagg
      241 gtgcagtgcc agaaaccggc tgaaaacggc tgtagtgaag accttgggca ttccggtggt
      301 ggggagttcc ggataggcta cggccaccat gtttttgcgg cgaactctcc gaaagaaaga
      361 cgggaagcag catcgctact ggagcgttgt tgagaaccgg cgcgttgccg gcgagcgcgt
      421 ggtgcaaaaa cgtcttctgt acctggggga gatcaacgac tcccaggaac tggcgtggcg
      481 aaagtcgatc gagatcctgg atgagggctg cgaccggcgg cggacacttg cgctgttccc
      541 ggaggatcgc tgtgacgggg ttctgccgga tgcggcgatc gtccggctga agttgtccga
      601 actccgtctg tgccgaccac ggcagtgggg agcgtgctgg ctggcgttga ggctctggga
      661 ggagttgcgg cttgaccggt tctgggccga acggcttgcc cccagtcgca aggggacgcg
      721 ctgggatcag gtgctgttcg tcctggttgc ctaccggctg ctggagccgg gcagcgaatg
      781 gcgcctgcat cggcagtggt tcgagcgcac ggcgctggcc gatctgctgg gtgccgattt
      841 cggcttggcg gaaatccaca aactctaccg ctgccacgat cgtctgctgg agcacaagcc
      901 ggcgctgttc aatcacctga cgagccggtg gcgggacctg ttcaatgtcc gcttcgacgt
      961 cctgctccac gatctgacca gcacctactt cgaggccgag ccgccgtttc ccgagggcga
     1021 caagcgccgg tt
//
LOCUS       DASRPQ010001787         4392 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2116987, whole genome shotgun sequence.
ACCESSION   DASRPQ010001787 DASRPQ010000000
VERSION     DASRPQ010001787.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4392
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2116987"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            222..698
                     /locus_tag="VFD73_20300"
     CDS             222..698
                     /locus_tag="VFD73_20300"
                     /inference="COORDINATES: protein motif:HMM:NF018232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1097 domain-containing protein"
                     /protein_id="HZI76313.1"
                     /translation="MDVLVALAISIGVLIAGWTYVALGVAALPVWAGIVAWGCFFAAG
                     GKTAGLSKTIAANLSGVLWAFLALSAWKSFGGGVPVLSVLVGVAALFMVLQAKIPALS
                     FIPGAFLGAATAVSVVVGANGTWTRTIIALVAGAVLGYLSEMLAGAMTRRPSRAAA"
     gene            complement(791..991)
                     /gene="rpsU"
                     /locus_tag="VFD73_20305"
     CDS             complement(791..991)
                     /gene="rpsU"
                     /locus_tag="VFD73_20305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005805980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HZI76314.1"
                     /translation="MTEVKLSDEDSLERALKLFKRKLQKSGLFGELRRRRHYVKPSEA
                     RAIKSAAAIRRKRKKKVTSDSW"
     gene            complement(1071..1478)
                     /locus_tag="VFD73_20310"
     CDS             complement(1071..1478)
                     /locus_tag="VFD73_20310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76315.1"
                     /translation="MFVSMRRYSPKNGAITRASLDLLRRQVHDDFLPRIQGISGFRGY
                     YLVNIENREIVTLSIYDTADGVAQCTQCAAEYTLRNPLLYELGRPEITEGEVLASASD
                     DGSPVEAAGRAAATALALWYEESRAMLLSASER"
     gene            complement(1578..2381)
                     /locus_tag="VFD73_20315"
     CDS             complement(1578..2381)
                     /locus_tag="VFD73_20315"
                     /inference="COORDINATES: protein motif:HMM:TIGR03971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mycofactocin-coupled SDR family oxidoreductase"
                     /protein_id="HZI76316.1"
                     /translation="MAEFAGRVAFITGAAHGQGRATALALAREGARIAAFDVARPMAY
                     PGYAMGSSSELESLVAACTGLGAECLTFAGDVRDDVAVTAAVEATTSRFGRIDILFNN
                     AGICAYGLAHELTEEAWDAMLDINLKGAWLVARRVIPVMMRQRSGVIINNSSVAGLRG
                     MGRLSHYAASKWGLTGLTKSWAIELAPYGIRVNSIHPTGVNTPMNDGLAALEGLTPRE
                     IAERSAGNLLPVPWIEPEDVAQAVLYLASDKARFMTGAPLVLDAGLLSR"
     gene            complement(2381..2941)
                     /locus_tag="VFD73_20320"
     CDS             complement(2381..2941)
                     /locus_tag="VFD73_20320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76317.1"
                     /translation="MPRIAPLDPDAAPPDARAAADAHVRNHARMTNMKRTLLQSLPAF
                     NALMAWYSLRDTVQPFLGERLTTLFAHAISAETDCLICSTFFRRMLIQTGENPERLRL
                     DERETAVLEFGRALAVSPFKVADEVYQPLTRYFSPAQIVALTAFGAMMVATNVVNNAL
                     DIELDEYLQPYRKGVRESAGTTVNRT"
     gene            complement(3021..3608)
                     /locus_tag="VFD73_20325"
     CDS             complement(3021..3608)
                     /locus_tag="VFD73_20325"
                     /inference="COORDINATES: protein motif:HMM:NF013073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HZI76318.1"
                     /translation="MKRIAYALPLLAGIPSVAFAQVTLSIPRLQRPVLRATLGPVQVV
                     ASLTARDVSVHSPRSESKPRAISARAAGILATAERYLGTRYRYGGASPREGFDCSGFV
                     QYVFAKHGIELPRTSRQQAHAGDALPLSTAALKPGDLLLFASGGRQVNHVALYVGNNR
                     ILHASAGAGRVVYDDLTTPRGHWYLQRHVASRRLL"
     gene            complement(3616..>4392)
                     /locus_tag="VFD73_20330"
     CDS             complement(3616..>4392)
                     /locus_tag="VFD73_20330"
                     /inference="COORDINATES: protein motif:HMM:NF024754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HZI76319.1"
                     /translation="AYMLAGVVPALNQLRLRRARKISSINLLDQLGLAMALELTPAPG
                     EEAEIFRDLTRPFTLGRYSDCLENYAVEVSQSAAEAPSLEQVIELLGGRALMERLRAE
                     RPVAERYPIAIERLRTLVRATQGNTLNEQIDDLLARAALSTSAGVETDPNRINLLTLH
                     STKGLEFSRVYVVGVEDHQLPGWKTLEDDDAAAIQEARRLLYVGMTRAKDRLVLTRAT
                     RRAGISTGGCLFLLEAGLLDSGGTPPFGTPPALATQVTFR"
BASE COUNT          817 a         1361 c         1380 g          834 t
ORIGIN      
        1 gcaactcaat gacgcgcgcg gcgagttggt ggcaaccgag gatgccctcc tccgcctcag
       61 ggccgaggta gacaaactca gtccggtcag atcttgacga ccgtggatca gggtgctacg
      121 ctagccactc ctcactccga aatgacgaga cattacgtcc gcctttccgt ttcgaagcag
      181 cgggaaaggc ccttgcagtg cccttctacc ggaggtggcc tatggacgtg ctcgtcgctc
      241 ttgccatcag cattggggtt ctgatcgccg gttggaccta cgttgctctg ggagttgccg
      301 ctttaccggt gtgggcgggc atcgtggcct ggggctgctt ttttgccgcc ggtggaaaga
      361 ccgcagggct gagtaagacc attgccgcca atctgtccgg agtgctttgg gcgttcctcg
      421 cgctgagcgc ctggaagagt ttcggtggag gtgtgccggt gctttcggtg ctggtcggag
      481 tggcggcgct gttcatggtg ctgcaagcca agatcccggc gctctccttc attcccggtg
      541 cattccttgg tgcggccact gcagtcagcg tcgtagtggg agcaaacggc acctggacca
      601 ggaccatcat cgccctcgtg gcgggcgcag ttctagggta cctgtctgag atgctggcag
      661 gcgcgatgac tcggaggcca agccgggcgg ccgcgtagcc acgcttccta gctacgaaac
      721 acaaatccgg agccgctgtg gctccggatt ttcttttcct tcttcgggat tcccgcggaa
      781 ctcgagactc ctaccaggag tcgctggtca ccttcttctt ccgcttgcgg cgaatggccg
      841 ccgcactctt gatcgctctc gcttcactgg gctttacata gtgacgccgt cttctgagct
      901 caccaaagag ccccgacttc tgcagcttgc gcttgaacag cttcagcgct cgctccaggc
      961 tgtcttcatc actcagcttg acttcggtca tgccgtgctc ctcgccgaaa gaggaaagca
     1021 aaggggccgg cgctctgcca gcccctcggg agcatcacct ggctgatagg tcaccgctcg
     1081 gatgcggaga gaagcatagc ccgtgattcc tcataccaca aggcgagcgc agtggccgca
     1141 gctcgtccgg cagcttccac cggactcccg tcatcggaag cggaggcaag cacctcgccc
     1201 tcggtaatct cgggtcgccc taactcgtag agcagcgggt ttcgaagggt gtattcagcg
     1261 gcgcactgag tgcactgagc tacaccatca gcggtgtcgt agatcgagag ggttacgatt
     1321 tcccggttct ctatgttgac gagatagtaa ccgcgaaaac cggagatacc ctgaattctc
     1381 ggaaggaaat cgtcgtggac ctggcggcgg agtagatcga gcgaggccct ggtgattgcc
     1441 ccgttcttcg gactgtacct gcgcatgctg acgaacatct tctcctcggg acagcggcct
     1501 tcgtttagcc gactgatcga acttaatcgc gaggatcgga ccctgcgaga tccgatgcca
     1561 cctctgggcc gcgtctgcta tcgactcagg agtccagcgt ccagcaccag cggcgctcca
     1621 gtcatgaagc gagccttgtc tgacgcgagg tacaggaccg cctgggccac gtcctctggc
     1681 tcgatccagg gcaccggcag gaggttgccg gctgatcgtt ccgcgatctc ccggggggtg
     1741 agtccctcga gggcggcgag gccgtcgttc atgggcgtat tcacgccggt cgggtgaatc
     1801 gagttgacgc ggattccgta aggagctagt tcgatggccc atgacttcgt cagtccggtg
     1861 agtccccact tggacgcggc gtagtggctg agccgtccca tgccgcggag tccggccacg
     1921 gacgagttgt tgatgatgac cccggagcgc tgccgcatca tgaccgggat cacccgccgt
     1981 gccaccaacc acgcaccttt gaggttgatg tcgagcatgg cgtcccaggc ttcctcggtg
     2041 agctcgtgcg ccagcccgta ggcgcagatg ccggcgttgt tgaacagaat gtcgattcgc
     2101 ccaaaccggc tggttgttgc ctccaccgca gcagtgacgg caacatcgtc ccggacgtct
     2161 cccgcaaagg tgaggcactc ggccccgagc ccggtgcagg cagcaaccaa tgactccagt
     2221 tcgctgctcg accccatggc ataaccagga taggccatgg gacgggcgac atcgaaggcg
     2281 gcaatgcgag caccctcgcg tgccagtgcc aacgccgtgg ccctgccctg gccatgagcg
     2341 gccccggtga tgaaagcgac tcggccggcg aactcagcca tcaggttcga ttgactgtgg
     2401 tgcccgcgct ctcccgcact cccttgcggt agggctggag gtactcatcg agttcgatat
     2461 cgagcgcatt gttgaccacg ttggtggcga ccatcatcgc gccgaacgcg gtcagcgcta
     2521 cgatctgggc cgggctgaag tacctggtca atggctggta cacctcatcg gccaccttga
     2581 aaggcgacac tgccagcgcc cggccgaact ccaacacagc ggtttcccgt tcgtccagcc
     2641 ggagtcgttc ggggttttcc ccggtctgga tcagcatgcg ccgaaaaaag gtggagcaga
     2701 tgaggcaatc ggtttctgcg gagatggcgt gggcaaaaag tgtggtcaac cgctcaccga
     2761 gaaacggctg caccgtgtca cgcagcgaat accacgccat cagcgcgttg aacgccggca
     2821 gcgactgcag cagcgtccgt ttcatgttgg tcatccgggc gtgattgcga acgtgagcat
     2881 ccgcagcggc acgggcgtct ggtggggcgg cgtcggggtc gagaggcgca atccggggca
     2941 ttggcggaag actccgtggg agggtccggc atccgactca atctagagaa ctcttggagg
     3001 cgggagaaga actccgccgg ctacaaaagc cggcgggagg caacgtgacg ctggagatac
     3061 cagtgtcctc gcggggtcgt gagatcatcg tacacgacgc gaccggcacc ggcgctcgca
     3121 tgcagaattc ggttattgcc gacatagagg gcgacatggt tcacctgcct cccgccactc
     3181 gcgaacagca acaagtcccc cggcttcaac gctgcggtgg acagcggcag cgcatctcca
     3241 gcatgcgcct gctgccgtga ggttcgggga agctcgattc catgcttcgc aaagacatac
     3301 tgcacgaatc ccgagcagtc gaacccctcc ctgggcgacg ctccgccata gcgatatcga
     3361 gttcccaaat accgctcggc ggtggcgaga atgccagccg ccctggcact tatggcgcga
     3421 ggcttcgact ctgatcgtgg tgagtggacg gagacgtccc gagcggtcag cgaggcgact
     3481 acctgcaccg gcccaagagt ggctcggagc accggccgct gcagccgggg aatcgacagc
     3541 gttacttgag caaaggcgac actcgggatg ccagccagga gcggcagagc atacgcgata
     3601 cgcttcatgt gagacctacc tgaatgtgac ctgggtggcc aatgcaggag gtgtgccaaa
     3661 cggaggagtg cctccgctat cgagcagccc ggcctcgagc agaaagaggc agcctccggt
     3721 agaaattccg gcgcgacggg tagcgcgggt gagaaccagt cgatccttgg cccgcgtcat
     3781 acccacgtag agcaagcgcc gagcctcttg aattgctgct gcgtcatcat cttcgagggt
     3841 tttccagccg gggagctggt gatcctctac gcctaccacg tacacccgag aaaactccag
     3901 tcccttggtc gagtgaaggg tgagcaaatt gattctgttc ggatcagttt ccacaccagc
     3961 gctggtagac agcgcggcgc gcgctaacag atcgtcgatc tgctcgttca gcgtattccc
     4021 ctgggtcgcg cgcaccaagg tccggagacg ttcaatggcg atcggatagc gctcggccac
     4081 gggccgctcg gcccggagcc gctccatcag cgcacgaccc cctaagagct cgatgacctg
     4141 ctccagcgac ggcgcctccg cggcactctg gctcacctca accgcgtaat tctccaggca
     4201 gtcactgtag cggcccagcg tgaacggcct ggtgagatcg cggaagatct cagcttcctc
     4261 acccggggca ggggtgagct ccaatgccat ggccagcccc agctgatcca gcagattgat
     4321 cgaggagatc ttgcgggctc gtctgagccg gagctggttc agcgccggca ccactccagc
     4381 cagcatgtag gc
//
LOCUS       DASRPQ010001788         1480 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2752365, whole genome shotgun sequence.
ACCESSION   DASRPQ010001788 DASRPQ010000000
VERSION     DASRPQ010001788.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1480)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1480)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1480
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2752365"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VFD73_20335"
     CDS             <1..244
                     /locus_tag="VFD73_20335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76320.1"
                     /translation="VATDVRLGVPYVAQHGQTSKLRGGGCTEPGHEVRTMHQGDPLAT
                     QLPRQPNGSPEKWTGLAVAQVDGAERGGLKSGTAKE"
     gene            444..1460
                     /locus_tag="VFD73_20340"
     CDS             444..1460
                     /locus_tag="VFD73_20340"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM/SPASM domain-containing protein"
                     /protein_id="HZI76321.1"
                     /translation="MHNLRHLNRVSTGLSYLLQRDRVWGQPVFFTIETINSCNFRCVY
                     CPQSDQEHHFVNGRGIMSLDDFKRIIANLRSCFDVRIVSLHRDGEPLLNKRLEAYIEH
                     LTELGIYVTISSNCSLLSEERAHRLVRASLHMVGTDFCADKATYERLRVRGVWEETLE
                     GIRQLLRAGEQQQADFRVVIKDMATHATGPEEAKELMARTRALFPEWSDRVTVMPVYF
                     HNALGESLVNLSKPAEAPERTLYTLCHQPWVNFTIDFAGRVVGCCRDLRSEYVLGNLL
                     EEPADKIWNGEKMMSLRRALTEKRPQDIGICKACDVPWQGSYSGRTPLEKVRNFFFAG
                     AWRR"
BASE COUNT          285 a          459 c          479 g          257 t
ORIGIN      
        1 cgtggcgact gatgtccggc tgggggttcc gtatgtggca cagcacgggc agacgagcaa
       61 gcttcgcggc gggggctgca cggagcccgg ccatgaggtc cgaacaatgc accagggcga
      121 tcctctggcg acgcagctcc cccgccagcc caatggaagc ccggagaaat ggaccgggct
      181 tgcggtagct caggtcgacg gagcggaacg tggcggtctg aaatccggca ctgcgaaaga
      241 atgactgcac cacgggtgca tcggatgtgc aaaaggctac atgttcatag tcggggccgg
      301 tcaggccctg agcgatcctc aggctcgaga tctcggtgcc cccaactatg ggccacgcga
      361 ggatgtgcgc aattcgctga gtcactgagc cttttcgctc acgtcaggta ttatagatgc
      421 cggaggataa ccggccaaac gccatgcaca acctcagaca tctcaaccga gtctccaccg
      481 ggctcagcta cctgctgcag cgcgatcggg tctggggcca gcccgtgttc ttcaccatcg
      541 agaccatcaa ttcctgcaac ttccgatgcg tctactgccc gcagagcgac caggagcatc
      601 acttcgtcaa cgggcgaggc atcatgtcgc tcgacgactt caagcgcatc atcgccaacc
      661 tccggtcgtg cttcgatgtc cgcatcgtct cgctgcatcg ggacggggag cctctgctga
      721 acaagcggct cgaggcctac atcgagcacc tgacggagct gggcatctac gtgaccatat
      781 cctccaactg ctcccttctc tcggaggagc gtgctcaccg cctggtccgg gcgagcctgc
      841 acatggtcgg aaccgacttc tgtgccgaca aggccaccta cgagcgactg cgggtgaggg
      901 gcgtgtggga ggagacactg gagggcattc gtcagctgct ccgcgcgggg gagcagcagc
      961 aggcggactt ccgggtggtc atcaaggaca tggcgaccca cgcgactggg cccgaagagg
     1021 cgaaggagtt gatggctcgc acgcgggcat tgttcccgga gtggtcggat cgcgtcaccg
     1081 tgatgccggt gtactttcac aatgcgctcg gcgagagcct ggtgaatctg agcaagccgg
     1141 ccgaggcgcc cgagcgcacc ttgtataccc tctgccatca gccgtgggtg aacttcacca
     1201 tcgacttcgc ggggcgcgtg gtcggctgct gccgcgatct tcgcagcgag tacgtgctcg
     1261 gcaacctcct cgaggagcca gcggacaaga tctggaacgg cgagaagatg atgagtctcc
     1321 gacgagccct gaccgagaag cgcccgcaag acatcggtat ctgcaaggcg tgtgacgtgc
     1381 cctggcaggg ctcctattcc ggccgcaccc cgctggagaa ggtcagaaac ttcttcttcg
     1441 cgggggcctg gcggcgctag cggcgatcat ggcgacaccg
//
LOCUS       DASRPQ010001789         1444 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_217704, whole genome shotgun sequence.
ACCESSION   DASRPQ010001789 DASRPQ010000000
VERSION     DASRPQ010001789.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1444
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217704"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            72..>1444
                     /locus_tag="VFD73_20345"
     CDS             72..>1444
                     /locus_tag="VFD73_20345"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIR domain-containing protein"
                     /protein_id="HZI76322.1"
                     /translation="MPSLSSGGIFLSYRRQDAAPYARLLKSQLSDRFPDADVFMDLDS
                     IEAGLDFAEVIRDAVGSCTVLVALIGHRWATVTDEEGHRRLDNLDDYVRFEVQTALER
                     GVRVIPVLVDGAKPLRQQQLPSELQKLARLNALELTYGRYDYDANRLLDTIQRVLAAA
                     ADSIDQSSLPRDVEAAVVPRPEVARPGGNVPDVAGPESARDGDARAARLLADAERIAQ
                     SITPDPEKAGALADVASALAATDPDRAERIARSITIARDGALASALRTLGVTDPDFVR
                     RVTSGSASADVYRMRRIVHSITSDFNKAEARALADIAGTLAAADPDRAERIARSITSY
                     SDKARALADIAGTLAATHPDHAARLLADAERIALSITSDSDKVRALADIAGTLAATDP
                     DRAERIAAEAERVTQSVTGKSRIVRKLRSKKPFSGEGVALADIASKLAATDPDRAERI
                     ARSIITD"
BASE COUNT          265 a          479 c          458 g          242 t
ORIGIN      
        1 caagacgaga cgatgctctt attacctcgc atcggcataa aatggtgctt gtcccagggg
       61 aggtgaggga catgcctagc ttgtcatctg gggggatctt cctcagctac cggcgtcagg
      121 atgctgcacc ctacgcgcgg ctgctgaagt cccagttgag cgatcgtttc ccagatgcag
      181 atgtgttcat ggatctggac tccattgaag cagggctgga cttcgctgag gtcatccggg
      241 acgcggttgg ctcatgcacg gtgcttgtgg ccttgatcgg gcatcgatgg gcgacagtta
      301 ctgatgagga ggggcaccgg cggctcgata acctggacga ctacgtgcgg ttcgaagtcc
      361 agacagcact tgagcgcggc gtgcgggtga tcccggtgct ggtcgatggg gctaaacctc
      421 tgcggcagca gcagcttccc tcagagcttc aaaagcttgc ccggcttaat gctcttgagt
      481 tgacctatgg ccggtatgac tacgacgcga accggctcct ggacacaatc cagcgggtgc
      541 tagccgcggc agccgattcc atcgaccagt cctcgttgcc cagggacgtc gaggctgccg
      601 tcgttcctcg ccctgaagtg gcccggcctg gcgggaatgt tcctgatgta gcgggccctg
      661 aatcagcccg agacggcgac gcccgcgccg cccggctcct tgccgacgcg gaacgcatcg
      721 cccagtcgat cacccccgac cccgagaagg ctggggcgct tgctgacgtc gcgtcggcgc
      781 tggcagccac cgacccggac cgcgcggaac gcattgcccg ctcgatcacc atcgcccggg
      841 acggggcgct tgctagcgcg ttgaggacgc tgggagtcac cgacccagac ttcgtgagac
      901 gcgtcacctc cgggtctgcc agcgccgacg tgtaccgcat gagacgcatc gtccactcga
      961 tcaccagcga cttcaacaag gccgaggcca gggcgctcgc tgacatcgcg gggacgctgg
     1021 cagccgccga cccagaccgc gcggaacgca tcgcccgctc gatcaccagc tactccgata
     1081 aggccagggc gctcgctgac atcgcgggga cgctggcagc cacccatccg gaccacgctg
     1141 cccggctcct tgccgacgcg gaacgcatcg cgctctcgat caccagcgac tccgataagg
     1201 tcagggcgct tgctgacatc gcggggacgc tggcagccac cgacccagac cgcgcggaac
     1261 gcatcgccgc tgaggcggaa cgcgtcaccc agtccgttac gggcaagtcc cgcatcgtgc
     1321 gaaagttgag atcaaaaaaa cccttcagcg gggagggagt tgcgctcgcc gatattgcgt
     1381 cgaagctggc agccaccgac ccagaccgcg cggaacgcat cgcccggtcc atcatcaccg
     1441 actg
//
LOCUS       DASRPQ010001790         1900 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1482806, whole genome shotgun sequence.
ACCESSION   DASRPQ010001790 DASRPQ010000000
VERSION     DASRPQ010001790.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1482806"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..408)
                     /locus_tag="VFD73_20350"
     CDS             complement(<1..408)
                     /locus_tag="VFD73_20350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76323.1"
                     /translation="MQSTVIPPIRRATPILISVFAFPVAATAQQVEQYTSRGDEVAIY
                     NLAGEVRIEPGPGPAVTTQVTRGGAEAGKIKVLRGEIDGRETLRLVYPSDRIQYPGMS
                     DESSTQLRVRDDGTFSDNDHGDDDHDRHREEGRR"
     gene            552..>1900
                     /locus_tag="VFD73_20355"
     CDS             552..>1900
                     /locus_tag="VFD73_20355"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HZI76324.1"
                     /translation="MTDHLPRLFAALANRYTIERELGRGGMATVYLAHDLKHSRRVAL
                     KVLRPELTMVLGPDRFLREIQIAARFVHPHILPVFDSGEADGILYYVMPFVAGESLRE
                     RLNREGALPVDDAVEIACDAANALAYAHGMGIVHRDIKPENILLEEGQAIIADFGIAM
                     AISAATTLGHERLTEGNLALGTPHYMSPEQVVGEVSLDGRADIYSLGCVLYEMLTGSP
                     PFSGPTPQSVALQHAQSSPPMVRERRPQVPPRVEQVVVKAMHKLPSDRFATAAEFAAA
                     LPRHATPTVELDLPRLRRRHFSRVAWALAGALALAVGLTATAFYRRGTPTLDPSLYMV
                     VPFRHRAASAPLLLNGDQCESLLHDALGRWRGLQMVDPLWVSDARLRRGNGANTLEDG
                     LAIARERRAGRVIVGEVWQFRDTIYVRGLLYDPSGSAQLIREHVVRIAPDLKDAQTR"
BASE COUNT          321 a          614 c          605 g          360 t
ORIGIN      
        1 tcgacgaccc tcttcccgat ggcggtcgtg atcgtcatcg ccgtggtcgt tatcggagaa
       61 ggtgccgtcg tcccggaccc ggagctgagt ggacgattca tcgctcatgc cggggtattg
      121 aatacgatcg gacgggtaga ccaaccgcag agtctcgcgt ccgtcgattt cacctctcag
      181 gaccttgatc ttcccggcct cagcgccacc tcgggtgacc tgggttgtta ccgcagggcc
      241 ggggcccggc tcgatccgca cctctcccgc caggttgtag atcgcgacct catcgccccg
      301 gctggtgtat tgctccactt gctgggccgt ggcggcgacc gggaaggcaa agacagagat
      361 caggatcggg gtggccctgc ggatcggcgg tatgacggtc gactgcatgg agttcgctcc
      421 gaaagggaaa ctgcgggtta gacgaggctc aggcccgaaa ggttgcagcg cttctgaagt
      481 taggtctggc ccgtactggt acctggtcgt atagtacgac tctggccgcc ctcacggcca
      541 gcacccctcc tgtgaccgac cacctcccgc ggctgttcgc cgcactggct aatcgataca
      601 cgatcgagcg agagctcggc cgcggtggaa tggcaacggt ctatcttgcc catgatctga
      661 agcacagtcg ccgggtcgcg ctcaaggtgc tacggccgga gctgaccatg gtcctcggcc
      721 ccgatcgctt cctgcgcgag atccagatcg ccgcccggtt cgtccaccct cacatcctcc
      781 cggtcttcga ctccggagag gccgacggga tcctctacta tgtgatgcct ttcgttgccg
      841 gggaatccct ccgcgaacgc ttgaaccgcg agggagcgct tccggtcgac gatgccgtag
      901 agatcgcctg tgatgcagcc aatgcgctcg cctatgccca cggcatgggc atcgtccacc
      961 gggacatcaa accggaaaac atccttctgg aggagggcca ggcgatcatc gccgatttcg
     1021 ggatcgccat ggccatcagt gccgcgacca cgctcgggca tgagcgtctt accgagggca
     1081 atctcgcgct gggaactccg cactacatga gcccagagca ggtcgtgggc gaagtgtcgc
     1141 tcgatggccg cgccgacatc tacagtctgg gatgtgtgct ctacgagatg ctgacaggaa
     1201 gtccaccgtt cagcggacca acaccccagt cggtggccct gcagcacgcg caaagctccc
     1261 ctcccatggt tcgggagcgg cgcccccagg ttccgccacg ggtggagcag gtcgtggtca
     1321 aggcgatgca caagctgccc tcggaccgtt tcgccactgc ggcggaattt gcggcggcgc
     1381 tgcctcgcca cgcgactccc acagtcgagc tcgatctccc gcgcttgcga cggcggcact
     1441 tctcccgggt ggcctgggct cttgccggcg cgctcgctct tgccgtgggg ctcaccgcaa
     1501 cagcgttcta ccgccgaggg acaccgaccc tggatccgtc actttacatg gtggtcccat
     1561 tccgacatcg cgcggcatcg gcaccactgc ttttaaacgg cgatcagtgc gagtcgctgc
     1621 tgcacgatgc attgggacgc tggcgtgggc tccagatggt cgacccgctc tgggtcagtg
     1681 atgcccggct tcggcgcggc aacggggcga atacgttgga ggatggattg gccatcgcac
     1741 gggagcggcg ggccggacgg gtcatcgtgg gagaagtttg gcagttcagg gatacgatct
     1801 acgtgcgggg actgctctac gatccatcgg gatcggcgca gcttatccgg gaacacgtcg
     1861 tgcgaattgc tcccgacctg aaggacgccc agactcgctt
//
LOCUS       DASRPQ010001791         1240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_217933, whole genome shotgun sequence.
ACCESSION   DASRPQ010001791 DASRPQ010000000
VERSION     DASRPQ010001791.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217933"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1221)
                     /locus_tag="VFD73_20360"
     CDS             complement(<1..1221)
                     /locus_tag="VFD73_20360"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HZI76325.1"
                     /translation="MSDTSPPLYYLLLNPWTRGVGTSDRSLRLFSVFWALAAFPLIWS
                     LGARIGGPPAAIAAGLLYALAPVSLYYAVEGRMYSMLWFLATVFVWLTFRLHDRGNDP
                     ATICLWVIAAAAGFLTHYFFAFVWSAGVFWLALHPGRFKRPYLAAAVAVTVAAVLPWY
                     LQLPSSLSRWRVTGSWLNGRLSFTQALSAPLLLGWNLLAGRGVWGGSRWMDRLLAALL
                     VVLAWAVWRRGIRPILSPPLRLLWLWVLGACFGPLVFDLLRGTMASLIGRYALAGLPA
                     AMLLVGFALSMLPVRQHLLLLVFIVLTWLPGMRGVFEHPRHWEPYLGIAEVVSADARP
                     GDLVIVHSIPSGVLGVARYMTAEVPIASWVGQLQQRQVPRDLQTLLPGHRRIIFIRVH
                     AIAEPSPEEDWLRQN"
BASE COUNT          290 a          374 c          422 g          154 t
ORIGIN      
        1 gttctggcgt agccagtctt cttccggtga cggttccgcg atggcatgca cccgaatgaa
       61 gatgatgcgg cggtggccag gaaggagagt ctgaagatcc cgtggcacct gccgctgctg
      121 cagctgacca acccacgagg cgatcgggac ctcggctgtc atgtagcggg cgacgccgag
      181 cacgccggac ggaatcgagt ggacgatgac gaggtccccc gggcgtgcgt ccgccgagac
      241 aacctcggca atgcccaggt agggttccca gtggcgaggg tgctcaaaca ccccgcgcat
      301 tcccggcagc caagtgagca caatgaagac cagaagcagg aggtgctggc ggacaggaag
      361 catgctgagc gcaaaaccca cgagcagcat ggcggccgga agtccggcga gcgcatagcg
      421 acctatcagc gaagccatgg tgcctcgcag caggtcgaat acgaggggtc cgaagcaggc
      481 cccgagcacc cagagccaga gcagtcgcag cggtggcgag aggatcggcc ggatgccgcg
      541 gcgccacacc gcccaggcca gtaccaccaa cagcgcggcc aacaggcggt ccatccagcg
      601 agacccgccc catactcctc ggccggcaag caggttccag cctagcagga gcggagcgct
      661 cagggcttgg gtgaacgaaa gacggccatt cagccaggag ccggtcacgc gccagcggct
      721 caggctgctc ggcaattgga ggtaccacgg cagcaccgcg gcaacggtca cggcaacagc
      781 cgcggccaga tatgggcgtt tgaagcgtcc cgggtggagt gcaagccaga acacgccggc
      841 cgaccagaca aaagcaaaga agtagtgggt gagaaatccc gctgcggcgg caatcaccca
      901 cagacatatc gttgcagggt cgttgccgcg atcgtgcaat ctgaaggtca gccagacgaa
      961 gaccgtcgct aaaaaccata gcatcgagta catccggcct tcgacggcgt agtagaggct
     1021 gactggtgcc agcgcgtaca agagcccggc cgcgatggca gccggtgggc cgccgatcct
     1081 ggcgccgagc gaccagatca gtgggaaggc tgcgagcgcc cagaagactg aaaagaggcg
     1141 aagcgatcga tcggaggtac cgactccgcg agtccacggg ttcagcaaaa ggtagtaaag
     1201 tgggggactc gtatcggaca gtagaacagc gcgaacgacg
//
LOCUS       DASRPQ010001792         2489 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3682106, whole genome shotgun sequence.
ACCESSION   DASRPQ010001792 DASRPQ010000000
VERSION     DASRPQ010001792.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2489
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3682106"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            619..2244
                     /gene="ltrA"
                     /locus_tag="VFD73_20365"
     CDS             619..2244
                     /gene="ltrA"
                     /locus_tag="VFD73_20365"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: protein motif:HMM:TIGR04416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZI76326.1"
                     /translation="MDTTAVAEANDAEAAATAVNGPEGGPGNWDAVQWATVEKDVRRL
                     RQRIFAASQAGDLKRVRNLQKLMLRSRANTLMSVRRVTEVNAGRKTAGVDGKVAVCAQ
                     DKAELADWVQHRAAPWSPQPVKRVYVPKKNGRRRPLGIPVIADRALQAVAVNALEPEW
                     EARFEPRSYGFRPGRGCHDAIKAIHEAGKGRNAKRLWVLDADLEAAFDRLNHNHIYAS
                     LGSFPARGLVWRWLKAGVVEGDWFTPTEEGTPQGGVISPVLMNVALHGMETAAGVRYL
                     RLGPNAAHVAAGAPVVVRYADDLLALCHTREQAEQVKARLAGWLTPRGLVFNEAKTQI
                     THLDQGVDFLGFSIRRYRGKLLTKPSKDALRRIQKRLSTEMRALRGANSDGVIRTLNP
                     IIAGWAAYYRIGVSSRAFQALDHHVWRLTYKWARLAHPNKLRRWVVNRHFGMFNPARH
                     DRWVFGSRATGYYLRKFAWTKIVRHQLVTGTASPDDPSLTEYWTSRRRRRKPPVATAI
                     FRLMRAQDGRCPVCRGLLLHADREPQSPQEWEQ"
     gene            complement(2267..>2489)
                     /locus_tag="VFD73_20370"
     CDS             complement(2267..>2489)
                     /locus_tag="VFD73_20370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011029009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZI76327.1"
                     /translation="IKKPSKTSGESLSAEQRTINMLHSATRAIAERGNSLLKTTFKAL
                     RRVSLCPWRIGAITAAALVLLHIEHDRTT"
BASE COUNT          462 a          727 c          880 g          420 t
ORIGIN      
        1 tgatgtcgag gatgtagtgc ccggtccagt gcgcagggac cgtccccgcc ttggcgtgcg
       61 tcgcgggtaa ctgcggggtg cgaagcccga ggaataggcc caaggatctg cgttccatcc
      121 gtggattaca ggctggggaa gaccggacgg gtgaagaaca tgaatcctct ttgatgcctc
      181 gtcatccagg tttccgccga tgggatgtag gagcgggaag gtaggggccg gccgttgtga
      241 ggcggcgggt gccggttggg gaagctaggt cagccgggag cgcaccactg tccccggggt
      301 gcagaggacg cccaccccgg tcgtttctta ctcatgtgga acgtgacaaa cccgtcatgg
      361 tccaggcgag cgtgtgctgt ctggtaggcc gaccgtgagg aacgccgaat tccgtggcgg
      421 gcgcaggacg acccgagaag cgaatgccgg tggccgaaag gcagcaggaa accgggaacg
      481 tcgacgctgg ctcctctgtc agtggttctc gtataactgg ccggatagga gcgcgtgctt
      541 cgacctgaaa gggtgccgac gcgggtcggg tgagcctgcg aagaccgacg acgaacgaca
      601 ccagtaccga ggggcaagtt ggacaccacg gccgtggcgg aggcgaacga tgccgaagct
      661 gctgcgaccg cggtgaacgg acccgagggc ggacctggca actgggacgc cgtgcagtgg
      721 gcgacggttg agaaggacgt acggcgtctg aggcaacgga tcttcgcggc atcgcaggcg
      781 ggggacctga agcgggtccg caatctgcag aaactgatgc tccgaagccg cgctaacacg
      841 ctgatgagcg tgcggcgggt gacggaggtc aatgctggcc gcaagaccgc tggcgtcgac
      901 ggcaaggtcg cggtatgtgc tcaggacaag gccgaactgg ctgactgggt gcagcatcgg
      961 gccgcaccgt ggtcgccgca gccggtcaag cgggtgtatg tgccgaagaa aaacgggcgc
     1021 cgtcgcccac tcggaattcc cgtgatcgct gaccgggcgt tgcaagccgt cgcggtcaac
     1081 gcgctggaac ccgagtggga agcacggttc gagccgagat cgtacggatt ccggccgggc
     1141 cgtggctgcc acgacgcaat caaggccatc cacgaggcag gcaaaggccg caacgccaaa
     1201 cgtctgtggg tgctcgacgc agatctggag gcggcatttg accggctcaa ccataaccac
     1261 atttacgcct cgctgggcag cttccccgct cggggactgg tctggcgctg gctaaaagca
     1321 ggtgtggttg agggcgactg gttcacgccg accgaagagg gaacgcctca gggcggtgtg
     1381 atcagccccg tgctgatgaa cgttgccctg cacggcatgg agaccgctgc cggagtccgg
     1441 tatcttcggc tcggccctaa tgccgcgcac gtggcggccg gcgcgcccgt ggttgtccgc
     1501 tatgctgatg atcttctcgc gctgtgtcac acccgtgagc aggccgagca ggtcaaggca
     1561 cggttggccg gctggttgac tcccagggga ctggtcttca atgaggccaa gacccagatc
     1621 acgcaccttg accagggcgt ggactttctg ggattcagca tccgtcgata tcgcggaaag
     1681 ttgctgacca agccgagcaa ggatgccttg cggcgtattc agaaacgact gtctaccgag
     1741 atgcgggcgt tgcgtggggc caactccgac ggggtgatcc gcacgctcaa cccgatcatt
     1801 gccgggtggg cagcctatta ccggattggg gtatccagcc gagcgttcca agcgctggat
     1861 catcatgtgt ggaggctgac ctacaagtgg gccaggctcg cgcacccgaa caagctgagg
     1921 cgctgggttg tgaatcggca cttcggcatg ttcaaccccg ccaggcacga ccgctgggtg
     1981 ttcggcagcc gggcgaccgg ctactacctt cggaagttcg cctggacaaa gatcgtccga
     2041 caccagctcg tcacgggaac ggcgtctccg gacgacccgt ccctgaccga gtactggacc
     2101 agccggcgac gccgcagaaa gccccccgtg gcaacggcca tattccgcct catgagggcg
     2161 caggatggcc gatgcccggt atgtcgaggc ttgctgttgc acgccgaccg ggagccgcaa
     2221 agcccacagg aatgggaaca gtgagccttt ctcggtagcg ggttgatcat gtggtccggt
     2281 catgctcgat gtggagcagg acgagcgcgg cggcggtgat cgccccgatc cgccagggac
     2341 acaagctgac ccggcgcagc gccttaaatg tggtcttgag cagcgagttc ccgcgctcgg
     2401 cgatggcccg ggtggcggag tgcagcatgt tgatcgtgcg ctgctcggcg ctgagcgact
     2461 ccccgctggt cttgctcggc ttcttgatg
//
LOCUS       DASRPQ010001793         1336 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3973593, whole genome shotgun sequence.
ACCESSION   DASRPQ010001793 DASRPQ010000000
VERSION     DASRPQ010001793.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1336
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3973593"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1082)
                     /locus_tag="VFD73_20375"
     CDS             complement(<1..1082)
                     /locus_tag="VFD73_20375"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF012630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031012 - extracellular matrix [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HZI76328.1"
                     /translation="MPIDAIPGTIQAPPATRVHFIVQFYDPPTVETMLALIGRGAALL
                     QYVPDNAFLVSLDDSVNLTGLGIRYAAPLSPPQKISPLITTPDPIVIRGYYVVEFHVD
                     IDTSRARSVILNSPAQLVENPDLERRHLLVHIADPSREPEILAALASNDSIGYIFPAS
                     DDLVMGRPTASLGISAQCISTFGDGWDGPGQNPATLFYYFSHLTAQLPEASVRSEILR
                     ALEEWAKVAQITWLPGGSPIGDHTVSIQFATGDHGDGFPFDGAGGVLAHTFYPAPPTA
                     EPLAGDMHFDDTETWHVGLDYDIFSVAVHESGHALGLGASDNPGSVMYPYYKLRTGLS
                     DGDKTSILTLYAPQAGNPVPALLALTV"
BASE COUNT          259 a          381 c          440 g          256 t
ORIGIN      
        1 accgtgaggg caagcagcgc aggcaccgga ttccccgctt gcggggcgta cagcgtgagg
       61 atgcttgtct tatcgccatc ggagagtccg gttcgcaatt tgtagtaggg gtacatcacc
      121 gaacccggat tgtctgaggc gcccaggccc agcgcatgtc cggattcgtg cacagcaacg
      181 ctgaagatgt cgtagtccaa gccgacatgc caggtctcgg tgtcgtcgaa gtgcatgtct
      241 ccggcgagag gctcggcggt gggcggagcg ggatagaatg tgtgggcgag cacgccgccc
      301 gcgccgtcga acgggaaccc gtcgccgtgg tccccggttg cgaactggat gctgacggtg
      361 tgatctccga tggggctgcc tcccgggagc caagtgatct gagcaacctt ggcccattcc
      421 tccagggccc gaagaatttc gctccggacg ctcgcctccg gcaattgcgc tgttaggtgg
      481 ctgaagtagt agaagagcgt ggcgggattc tgcccgggtc catcccagcc atcgccgaag
      541 gtggagatgc actgggccga gatgcccagc gaggctgtcg gccggcccat taccaggtcg
      601 tccgaggcag gaaaaatata gccgatggaa tcgttggagg ccaaagctgc gagtatctcc
      661 ggctctcgcg aaggatcagc gatgtgcacc agcaggtggc ggcgctccag atcggggttt
      721 tccaccagtt gcgcaggcga gttcaggatc acgctgcgcg cccggctcgt gtcgatatcg
      781 acatgaaact ccaccacata gtaccctcgg atcacgatag ggtcgggagt ggtgatcaac
      841 gggctgatct tttggggcgg actcaacggc gctgcgtagc ggattcccag gccagtcagg
      901 ttcactgagt cgtccagcga gaccaggaag gcgttatccg gtacgtattg cagcaacgcc
      961 gcgcccctgc cgatgagagc gagcatagtt tcaaccgtgg gcggatcgta gaactgaacg
     1021 atgaagtgca cgcgcgtggc tgggggcgcc tgaatcgttc caggtatggc gtcgatgggc
     1081 accttcaacc tcaggaccgg ctgggctagg gaaatcgctg agacgtaaag caagacgagc
     1141 aacatcctca tatctgtgta gtcgccgccg gatgagaaaa tcgccgggtg aatcgcactg
     1201 aacttctgta aggattttct tactccatgt ttccctcgtt caccctcctg ctcctggcga
     1261 ctgtggcgtt ttcgcagacg tacaccgtga cggctctcgc cgggagcgac tggatcggcg
     1321 acggcggccc ggcgac
//
LOCUS       DASRPQ010001794         3002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3973670, whole genome shotgun sequence.
ACCESSION   DASRPQ010001794 DASRPQ010000000
VERSION     DASRPQ010001794.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3002
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3973670"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..261
                     /locus_tag="VFD73_20380"
     CDS             <1..261
                     /locus_tag="VFD73_20380"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HZI76329.1"
                     /translation="SLERYFKPGYNPILVRVTGREPCALPGGGSTSCLAVQVSSRGEM
                     MRVWFTDDKQRLPAQLEIPLPFGSVTLSLVDAGQRDGGAAGR"
     gene            complement(266..1666)
                     /gene="glnA"
                     /locus_tag="VFD73_20385"
     CDS             complement(266..1666)
                     /gene="glnA"
                     /locus_tag="VFD73_20385"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HZI76330.1"
                     /translation="MPEKKIRQPAQADRPSLEGFPTDLRNAGKNDVLELARRFSVDFL
                     RLQFTDILGVNKNVEVPRSQFEKALDGEIMFDGSSIEGFVRIEESDMLLKPDLHTFRI
                     LPYDDEGGRVARLLCDIYTPEEQPFAGCPRTTLKRQVERARKMGFAMMAGCEAEFFMF
                     EKAADGAPTTVTHDSGAYFDLGPVDRGEEIRRVIVEQLVEMGFEVEAAHHEVATGQHE
                     IDFRYADALTTADNLTTFKFVVRNVASRFGYIASFMPKPIAGINGSGMHTHQSLFRGK
                     DNAFYDPQAEYQLSSTALCYIEGLLQHARGFCAITNPLINSYKRLVPGYEAPVNVAWS
                     MRNRSPLVRIPDRRGLGTRCELRMPDPSCNPYLALTVQLAAGLDGIEQKLQAREPVSR
                     NIFTMSYRDRRKYRIDELPRDLHEALEYLQKDDVIKAALGEHLTERFLEAKREEVLQY
                     NLQVSRWEIDNYLGRY"
     gene            1940..2593
                     /locus_tag="VFD73_20390"
     CDS             1940..2593
                     /locus_tag="VFD73_20390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76331.1"
                     /translation="MSGLSPGKMASERRAWSVAAVLCVLLLGGIVYRVTRSAGQPVAP
                     DMANSGVSSATLPGSAPAGRAPDISSMSPRERFDRLFNRVMQAAESGDSATVEQFTPM
                     ALGAYQQLDSVDADARYHAAVIHLQVGDVAPAKALADTILRDSPGHLFGYVIRGTAAQ
                     FEGDTTSLRRAQRDFLKHYQAEIATKRVEYSEHQPVVDAFKQQAEDAGPAERAGPSR"
     gene            2646..>3002
                     /locus_tag="VFD73_20395"
     CDS             2646..>3002
                     /locus_tag="VFD73_20395"
                     /inference="COORDINATES: protein motif:HMM:NF014658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MqnA/MqnD/SBP family protein"
                     /protein_id="HZI76332.1"
                     /translation="MAKRLIRVAHSPDSDDAFMFYGLAERKLDTGNLEYVHELSDIES
                     LNQRARQGELEVTAVSIHAYAYLWRTYALLNSGSSMGDGYGPRLVSTKPRPDDPRAAL
                     EGIRVAIPGKLTTAYLA"
BASE COUNT          533 a          971 c          922 g          576 t
ORIGIN      
        1 agtctggagc ggtatttcaa gcccggctac aacccgattc tggtgcgagt cacgggacgg
       61 gagccttgcg cgctccccgg cggcggcagc acctcctgcc tggcggtgca ggtgagctca
      121 cggggtgaga tgatgcgggt ctggttcact gacgacaaac agcggttgcc ggcgcagctc
      181 gagattccgc tgccattcgg cagtgtgacc ttgtcgttgg tggacgcggg gcagcgggac
      241 ggcggagcgg cggggcggta gccgtttaat atctccccaa ataattatcg atttcccaac
      301 ggctcacctg caggttgtac tgcagcacct cttcccgctt ggcttccaga aaccgctcgg
      361 tcagatgctc tcccagcgcg gccttgatca cgtcgtcttt ctgcaggtac tcgagcgctt
      421 cgtgcaaatc cctcggcagc tcgtcgatcc ggtacttccg gcggtcacga tagctcatgg
      481 taaaaatgtt ccggctgacc ggttctcgcg cctgaagttt ctgctcgatg ccatccagcc
      541 cggcggcgag ctgcaccgtc aacgccagat acgggttgca ggacgggtcc ggcatcctca
      601 gctcgcaccg ggtgcccaga ccccgccgat ccggaattcg gaccagtggc gaccgattcc
      661 gcattgacca ggccacgttg accggcgcct cgtaccccgg caccagccgc ttgtagctgt
      721 tgatcagcgg attggtgatg gcgcagaaac ctcgcgcatg ctggagcaga ccctcgatgt
      781 agcagagcgc cgtgctggag agttggtatt cagcctgagg atcgtaaaag gcgttgtctt
      841 ttccccggaa gagcgactgg tgggtatgca taccgctccc gttgatgccc gcgatcggct
      901 tgggcatgaa cgaggcgatg tagccgaacc tgctggccac attccgaacc acgaacttga
      961 aggtcgtcag attgtctgcg gtcgtgagcg cgtcggcgta gcggaagtcg atctcgtgct
     1021 ggccggtggc cacctcgtga tgggccgcct ccacctcaaa ccccatctcc accaactgct
     1081 caacgatcac ccgccggatc tcttcacctc gatccaccgg acccaaatcg aagtacgccc
     1141 ccgaatcgtg ggtgacagtg gtcggcgccc catccgccgc cttctcgaac atgaagaact
     1201 ccgcctcgca tccagccatc atggcaaagc ccatcttgcg ggcccgttcg acctgtcgct
     1261 tcaacgtagt tcgcggacaa ccggcgaatg gctgttcctc cggggtgtag atgtcgcaga
     1321 ggagccgagc gacccggccg ccctcgtcgt cataggggag gatccggaag gtgtggaggt
     1381 cgggcttcag cagcatgtcc gactcctcga tccggacgaa cccctcgatt gacgacccgt
     1441 caaacatgat ctcgccatcc agtgccttct cgaactgact ccggggtacc tcgacgttct
     1501 tgttgacgcc gaggatgtcg gtaaactgga gtcgcaagaa gtcgacactg aagcgccgcg
     1561 ccagctcgag cacgtcgttc ttgccggcgt tcctgaggtc cgtgggaaag ccttcgaggc
     1621 tgggccggtc tgcctgggct ggttggcgaa ttttcttctc gggcatgggc tggtctggga
     1681 gtcgaaggtc tagggtctag agtctagagg agaaaagtgt aagggccaga cccagactcg
     1741 acttcgaccc tggaccatgg acttgctacc gggttacgct tccccgatgc cggacaccac
     1801 cacctgcccg tcctgcggtc atgaggccac gggcaacttt tgcaatgcct gcggcgccag
     1861 tctcaccgct cgcacgtgca ccgtttgccg gaccgagctc tcggcccagg cacggttctg
     1921 ccaccggtgt ggtcatccgg tgagcggtct ctcgcccggg aagatggcgt ccgagcgacg
     1981 ggcctggagc gttgcggcag tgctgtgcgt gctcctgctg ggcggcatcg tctaccgggt
     2041 cacccgctct gccggacagc cggtggcacc cgacatggcc aactccggcg tcagctccgc
     2101 aacgctcccg ggaagcgcac cagccggccg ggctcccgat atcagcagca tgagcccgag
     2161 ggagcggttc gatcgtctgt tcaatcgggt catgcaagcc gccgaatcgg gcgattcggc
     2221 taccgtcgag cagtttactc ctatggccct cggcgcctac cagcagctcg acagtgtcga
     2281 tgccgatgcg cgctatcatg ccgcggtgat tcacctgcag gtcggcgatg tcgcaccggc
     2341 aaaagcgctg gccgatacga ttctcagaga ctctcccggg cacctcttcg gctatgtgat
     2401 ccgggggacc gccgcgcagt tcgaaggcga tacgacgagc ctgcgtcggg cccaacggga
     2461 cttcctgaag cattaccagg ccgagattgc caccaagcgg gtcgagtatt cagagcacca
     2521 gccggtggtc gacgcgttca agcagcaggc ggaagacgcg ggcccagcgg aaagagcggg
     2581 ccccagcagg tagtccgctt cttccgctag ctccgccaga ccgccctttc tcctttcctg
     2641 attccatggc aaaaagactc attcgcgtcg cccacagccc ggactccgac gatgccttca
     2701 tgttctacgg actggcagag cggaagctcg ataccggcaa cctcgagtac gtgcatgagc
     2761 tgagcgacat cgaatcgctg aatcagcggg ctcgccaagg cgagctcgag gtgaccgcgg
     2821 tttcgatcca tgcctatgcc tatctctggc gaacgtatgc cctgttgaac tccggctcct
     2881 ccatgggtga cggctatggg ccccggttgg tatcgaccaa gccccgcccg gacgacccac
     2941 gggcggcgct cgagggcatt cgggttgcca tccccggcaa actcaccacg gcgtacctcg
     3001 cg
//
LOCUS       DASRPQ010001795         2097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1144280, whole genome shotgun sequence.
ACCESSION   DASRPQ010001795 DASRPQ010000000
VERSION     DASRPQ010001795.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1144280"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1098)
                     /gene="glmS"
                     /locus_tag="VFD73_20400"
     CDS             complement(<1..1098)
                     /gene="glmS"
                     /locus_tag="VFD73_20400"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HZI76333.1"
                     /translation="MCGIVGYIGPRQAAGLLLEGLRRLEYRGYDSAGIAVVNGRGLKI
                     MKAAGKLSVLESELLENMPQGTIGIGHTRWATHGAPTTTNAHPHTDQSGRIAVIHNGI
                     IENSASIRKALEQRGHTFKSDTDTEVLAHLVGEFYHGNLEEAVANALRDVEGAYGLAF
                     ISSEEPGVIVAARNGSPLLVGVGENEFFVASDASPLLEHTRAVVYLDDGEMVVLTRDG
                     YRVRNLETARISKPVNQIDWDLATVERGGYAHFMLKEICEQAESLCNTLRGHLLEEEG
                     TARVSGLNLTDEELKQFERVIITACGTSWHSGIIGEYMLEEMARLPVEVEYASEFRYR
                     NPVVDPKTLVIGISQSGETADTLAAIREAKRR"
     gene            complement(1110..>2097)
                     /locus_tag="VFD73_20405"
     CDS             complement(1110..>2097)
                     /locus_tag="VFD73_20405"
                     /inference="COORDINATES: protein motif:HMM:NF014879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76334.1"
                     /translation="QVRLLAEEGPPRSSWEGLGSVREDPAAIQRHLDAILDLPLIDVP
                     LIRTRKFRVALDCVRGAGAGAILPLLDRLGCSVHGINLEMDGRFPRPPEPVPENLGEL
                     AELVRRSGAQIGLAVDPDVDRLALVDETGQPIGEDYTLAFAVRAVLDGRLKGGTPPTV
                     VVNLSTSLVVEDAARVAGARFVRAPVGEANVARTIREEGALIGGEGNGGVMLPALHIG
                     RDAPLGVALILQVLAKTGVTVSALVGESPRYTIVKAKADRGADLPTLYDRLRRRFSDA
                     VVDERDGLRLAWPDRWLHVRPSGTEPILRLIAEAPTQADAQALVAAGRELLD"
BASE COUNT          385 a          719 c          615 g          378 t
ORIGIN      
        1 gcgacgcttc gcctcccgaa tcgctgccag cgtatcggct gtctctcccg attgggagat
       61 gccgatgacc agggtcttgg gatcgactac cggattccgg tagcggaact ccgaggcgta
      121 ctctacctcc accggcaggc gcgccatttc ctccagcatg tattcgccga tgattccgga
      181 gtgccaggag gtgccgcacg cggtgatgat cacccgctcg aactgcttca gctcctcgtc
      241 ggtcaggttc agaccgctga cccgcgcagt tccctcttct tccagcaggt gaccacggag
      301 cgtgttgcac agactctcgg cctgctcgca gatctccttc agcatgaagt gggcatagcc
      361 gccgcgctcc acggtggcga ggtcccaatc gatctggttc accggtttgc tgatccgtgc
      421 ggtttccaga ttgcgcaccc ggtacccgtc tcgagtcagc acaaccatct caccatcatc
      481 cagatacacc accgcccggg tgtgctccaa aagcggtgaa gcgtcggacg ccacgaaaaa
      541 ttcgttttcg ccgacaccga ccaggagcgg agaaccattc cgggccgcta cgatgacgcc
      601 gggctcctcg gaggagatga acgcaaggcc ataggcaccc tcgacatccc ggagggcgtt
      661 ggccacggcc tcttccagat ttccgtggta gaactcaccc accaggtggg ccagcacctc
      721 ggtgtcggta tccgacttga aggtgtgccc ccgctgctcc aatgcctttc ggatcgatgc
      781 ggagttctcg atgatcccgt tgtggatgac cgcgatccgt ccggactggt cggtgtgggg
      841 atgggcgttg gttgtggtag gtgcgccgtg ggttgcccag cgggtatggc cgataccgat
      901 ggtgccctgc ggcatgttct ccaacagctc gctctccagg acggagagct taccggcagc
      961 cttcatgatc ttgagcccgc ggccattcac gaccgcgatt cccgcggaat cgtacccccg
     1021 atactccaga cgccgaagcc cttccaggag cagccccgca gcctggcggg gtccgatata
     1081 gccgacgata ccacacatcg tggcgaacct cagtccaaga gttctcggcc ggccgccacg
     1141 agtgcttggg cgtcggcctg ggtcggtgct tccgcgatca accgcaggat gggttcggtc
     1201 ccggagggcc tcacatggag ccagcggtcg ggccacgcca gccgcaaacc atcgcgctca
     1261 tccaccacgg cgtcggagaa gcgccggcgg agccgatcgt agagcgtcgg aagatcagca
     1321 ccccggtccg ccttggcctt cacaatggtg taccggggtg actctccgac caatgcagat
     1381 accgttaccc cagtcttggc aaggacctgc aagatcaagg ccacccctag tggtgcgtct
     1441 ctcccgatat gcagcgccgg caacatcacg ccgccgttcc cctcccctcc gatcagcgca
     1501 ccctcttcac gtatggtacg agccacgttt gcctctccca ctggagcgcg gacgaagcga
     1561 gcgccggcga cccgggccgc atcctccacc accagactgg tcgagagatt gaccactacc
     1621 gtgggaggcg ttccgccttt gaggcggcca tccaacacag ctcgaaccgc aaacgccagg
     1681 gtatagtcct cgccgatggg ctgtcctgtc tcatccacca aagccaaccg atctacgtcg
     1741 gggtctaccg ctaacccgat ctgtgctccc gaacggcgaa ccagctcagc gagctctccg
     1801 aggttttcgg gaaccggctc gggcggccga gggaagcggc catccatctc caggttgatc
     1861 ccgtgaacgc tgcaccccag ccgatcgagc agcggaagga ttgcgccggc acccgctccg
     1921 cggacgcagt cgagcgcaac cctgaacttc cgggtacgaa tcagcgggac atcgatcaag
     1981 ggcaagtcaa gtatcgcgtc cagatgacgt tggatggccg cgggatcctc ccggacactc
     2041 cccaggcctt cccacgaaga tcgaggtggc ccctcttccg ccagcagacg cacctgc
//
LOCUS       DASRPQ010001796         1216 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1144421, whole genome shotgun sequence.
ACCESSION   DASRPQ010001796 DASRPQ010000000
VERSION     DASRPQ010001796.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1216
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1144421"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..262
                     /locus_tag="VFD73_20410"
     CDS             <1..262
                     /locus_tag="VFD73_20410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76335.1"
                     /translation="SDPDGVVARVRRLRSRLRSTSGWDRSTGGYHHSESSLDSIERRC
                     SREQVSQNHWRRPRSVPEVQVSGGGSVGADVPQNAQASMGPT"
     gene            complement(411..608)
                     /locus_tag="VFD73_20415"
     CDS             complement(411..608)
                     /locus_tag="VFD73_20415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76336.1"
                     /translation="MNQTFERSTIMSNLFAEELAREHIHSRLKQAQSARRGQQLAAAR
                     RLSRKAERAAAQARLALARVI"
     gene            complement(673..948)
                     /locus_tag="VFD73_20420"
     CDS             complement(673..948)
                     /locus_tag="VFD73_20420"
                     /inference="COORDINATES: protein motif:HMM:NF014520.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WhiB family transcriptional regulator"
                     /protein_id="HZI76337.1"
                     /translation="MSISVLDPKGVDEELLPCRTNDSDLFFAESPTDVELAKALCLDC
                     PVRAECLAGALERREPWGVWGGQLFLQGVVIPRKRPRGRPRKNEVAA"
BASE COUNT          198 a          380 c          405 g          233 t
ORIGIN      
        1 gtcagatcct gatggagtcg ttgccagggt tcgccggctg aggtctcgac tgcgctcgac
       61 cagcgggtgg gaccgctcga ccggcggtta ccaccactcg gagtcgagct tggactccat
      121 cgagcgcagg tgctcgcgcg agcaggtctc gcagaaccac tggaggcggc cgcgctcggt
      181 ccccgaggtc caggtcagtg gaggcgggtc ggtgggcgcc gacgtaccgc agaacgcgca
      241 ggcgagcatg ggtccaactt agcccggcag atccccccgg acatgacgaa ggccggaccg
      301 acagcgagct tgtcgctgtc gatccggcct tgctgtttcc cgcgatcgaa cgagaagtca
      361 ggtacttcgg ttcctgagga ggttgcggag caaccgtctc gatggactgc tcagatcacg
      421 cgggccaaag ccagacgcgc ctgtgcagcg gcgcgctcag ccttgcggga gaggcgccta
      481 gcggccgcga gctgctgccc acgacgcgca ctctgcgcct gcttgaggcg cgagtgaata
      541 tgctctcgcg ccagttcctc tgcaaagagg ttgctcatga tggtgctccg ttcaaaagtc
      601 tggttcatgg tggtcttttt ctctgcttcc ccgtttggtg ttgctctcga cgtcaggtga
      661 tctcgcagct gctcaggctg cgacctcgtt cttgcgcggg cgtccccggg ggcgcttgcg
      721 ggggatcact actccttgaa ggaacagctg ccctccccac acaccccacg gctccctccg
      781 ctcgagtgcc ccggcaaggc actccgcgcg aacggggcag tcaaggcaca gggccttggc
      841 gagctcgacg tcggtgggcg attcggcgaa gaacaggtcc gagtcgttcg tacgacacgg
      901 aagcagctct tcatcgacac ctttcgggtc cagaacgctg atgctcatgt gtcacctcct
      961 tcatctctga tcgatcgctg ggtactgctg gaaaactgtt tgagaaacac gaaggccgcg
     1021 gatcccttgg tctgggattc cgcggccttg gaggtgccgg tcgatgagcg tggactcatg
     1081 tgactggcgg actccaaggc tggtgtccct gaaccggggt ggccttgacg gcatctgcgt
     1141 gacgcttgaa cgtggtcgcg gcggcgtagc agccggcggc cgtcgggcgc acgtcaccca
     1201 tgccgaaacc gtgagc
//
LOCUS       DASRPQ010001797         1497 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_218520, whole genome shotgun sequence.
ACCESSION   DASRPQ010001797 DASRPQ010000000
VERSION     DASRPQ010001797.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1497)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1497)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1497
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218520"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(152..1093)
                     /locus_tag="VFD73_20425"
     CDS             complement(152..1093)
                     /locus_tag="VFD73_20425"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI76338.1"
                     /translation="MIPGTEAIAVQIRNLRKAYGEVVAVDGLDLDIRRGECFGLLGPN
                     GAGKTTTIEICEGLNTPDEGEVVVLGRRWGERDRELRELLGISLQETQFSEKLTVHET
                     VTLFRSFYRNGPTPDEVIAMVQLQEKSRGRVGQLSGGQKQRLALACALVGNPELLFLD
                     EPTTGLDPQSRRQLWELIEGFKSDGRSILLTTHYMDEAERLCDRVAIVDHGRTIALGT
                     PRELIAQLRAEHVLEFALAGEQVVDPMALRNIEGVCAADRRDGTYRLQVDQLHRAMPA
                     LLNELRYQGAQLAELRTHSATLEDVFVSLTGRNLRDD"
     gene            complement(1132..1281)
                     /locus_tag="VFD73_20430"
     CDS             complement(1132..1281)
                     /locus_tag="VFD73_20430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76339.1"
                     /translation="MASSDPSPLVQTAVYMAGVLGGYVLLVRPDEWQQAWDVIRSAWT
                     KPSQD"
     gene            complement(1298..>1497)
                     /locus_tag="VFD73_20435"
     CDS             complement(1298..>1497)
                     /locus_tag="VFD73_20435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76340.1"
                     /translation="VNPLPDTPEDARSLARMTLADLATQVDRARRMDLDTYTRAHLAD
                     SRERIAQALNAQMFQNAGLPR"
BASE COUNT          279 a          464 c          471 g          283 t
ORIGIN      
        1 ttccggggcc cggttcctga aggccaatcc caatcctgca gcaagcaaca ccggaaagat
       61 gaagacccag aacaccgctt ccggttctcg aaagaactcc cggtagcgga cccgggtgag
      121 ctgcaccaag gggtggtcgg accagcgtcg atcagtcatc tcgcagattc ctgccggtaa
      181 gcgagacgaa cacgtcttcc agtgttgccg agtgggttct cagctctgcc aattgagcgc
      241 cctggtaccg aagctcattg agcagcgccg gcattgcacg atggagctgg tccacttgca
      301 aacgatacgt cccgtcccgc cggtccgcgg cgcagacccc ttcgatgtta cgcaatgcca
      361 tgggatccac cacctgctcg ccggccagcg caaactcgag gacgtgctcg gcccgaagct
      421 gcgcaatcag ctcccggggt gtgccgagcg caatggtgcg gccatgatcg acgatagcga
      481 cccggtcgca cagtcgttcg gcttcgtcca tgtagtgagt cgtgaggagg atcgagcggc
      541 cgtcggactt gaacccctcg atgagctccc agagctgccg ccgggattga gggtcgaggc
      601 cagtggtcgg ctcgtccaga aagaggagct ccggatttcc taccagggcg caggcgagcg
      661 cgagccgttg cttctgtccc ccggatagct gtcccactcg gccgcggctc ttttcctgga
      721 gctggaccat ggcgatgact tcatccggcg tcggcccgtt gcggtaaaaa ctgcgaaaca
      781 gggtgaccgt ctcatggacg gtgagctttt cggagaattg agtttcctgc agagatattc
      841 cgagcagttc ccgcagttcc cggtcgcgct cgccccaacg gcggcccagg accacgacct
      901 ccccttcatc cggggtgttg aggccctcgc agatctcgat ggtcgtggtc ttcccggctc
      961 cgttgggccc cagcaggccg aaacattcgc ctctgcgtat gtccagatcg aggccgtcca
     1021 ccgcgaccac ttccccgtag gcctttcgga gattgcgaat ctgaactgcg atagcttcgg
     1081 tgcccgggat catggaggag aatcataagc agagccggtc ctgcagcaga gctagtcctg
     1141 ggacggcttc gtccaggcac tccgaatgac gtcccaggct tgctgccatt catcgggccg
     1201 gaccagcagg acgtacccac cgagcacacc ggccatgtac acggcagttt gaaccagggg
     1261 agacgggtca gaagaagcca tcaagagcat gatgttatta cctcggaagt ccggcgttct
     1321 ggaacatttg ggcgttgagt gcctgggcga tccgctcgcg ggagtcggcc aggtgcgccc
     1381 gggtgtaggt gtcgagatcc attcttcgcg cgcggtccac ttgagtcgcg aggtcggcga
     1441 gcgtcatgcg agccaggctg cgggcatctt ccggggtgtc cggaagcggg ttcacaa
//
LOCUS       DASRPQ010001798         1006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2117905, whole genome shotgun sequence.
ACCESSION   DASRPQ010001798 DASRPQ010000000
VERSION     DASRPQ010001798.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2117905"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..825
                     /locus_tag="VFD73_20440"
     CDS             <1..825
                     /locus_tag="VFD73_20440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76341.1"
                     /translation="SGNGTGITATTAGGIAGLFSRTGSSSNPVLLATSGGSGPAIQAR
                     ALGSTNSAAVFDNPGTLGSAPTLDASSRSKGHVAYFHRSLGSASNSLDVLRAVTDMAT
                     GGAGNFEITNTSSTAAALAAVNQGPGWAAQFLGSNHGVAIQTTSGMALQVAGGTKNAV
                     VPTATGARALYTEESSEVWFTDYGFGRLEHGRARILIDPEFAQTVSLDQPYHVFVEPY
                     DDVELYVQERTNLGFVVMARAGDPNAEFGYRIVAKRSGFEHDRLERAPWADASFQR"
BASE COUNT          187 a          323 c          314 g          182 t
ORIGIN      
        1 agtgggaacg gcaccggaat caccgccacc accgccggcg gcattgccgg cctcttttcc
       61 aggacgggga gcagcagcaa cccggtgctt ctcgccacca gcggcggcag cggacctgcg
      121 attcaggcgc gggctctggg ctcgaccaat tcggccgccg tgttcgacaa tcctggaacg
      181 ctgggtagcg cacccacgct ggacgcatcg agtcgaagca agggacatgt cgcctacttc
      241 catcgttccc tcggctccgc ttcgaattct ctggatgtgt tgcgggcggt gaccgacatg
      301 gccaccgggg gcgccggcaa cttcgaaatc acgaatactt ccagtacggc cgcggccctg
      361 gccgcagtca atcaaggccc gggttgggcg gcacagttct taggcagcaa ccacggcgtg
      421 gctatccaaa ccacttccgg gatggcactc caggtggcgg gaggaaccaa gaacgcggtg
      481 gttcccacgg ccaccggcgc cagagctctt tacaccgagg aatccagcga ggtctggttt
      541 accgattacg ggtttggccg gctggagcat gggcgggcgc gaatcctgat cgacccggag
      601 tttgcacaga ctgtaagtct cgatcagccg tatcatgtct tcgtagagcc ctacgacgac
      661 gtcgagctct acgtgcagga acgcaccaac ctcggcttcg ttgtgatggc tcgtgcaggt
      721 gaccccaacg ccgagttcgg ctatcgcatc gtggccaagc ggagcggctt cgagcacgac
      781 cggctggagc gcgccccctg ggccgacgcc tcattccagc ggtaaagccg taccgctttc
      841 cgcatcaagg ttgctggaag ccggcccggt tgaccggaac ctcgtccagg gcgacaactg
      901 ccttgtgcag atcccaggct gccttcgcga tgagtccaaa gactttgtcg ttcgggacct
      961 gggccgattc accggtacga cctgcataga tgatggccgc catgat
//
LOCUS       DASRPQ010001799         1199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_520676, whole genome shotgun sequence.
ACCESSION   DASRPQ010001799 DASRPQ010000000
VERSION     DASRPQ010001799.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_520676"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..219
                     /locus_tag="VFD73_20445"
                     /pseudo
     CDS             1..219
                     /locus_tag="VFD73_20445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011603653.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
     gene            complement(460..948)
                     /locus_tag="VFD73_20450"
                     /pseudo
     CDS             complement(460..948)
                     /locus_tag="VFD73_20450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003876199.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
BASE COUNT          237 a          434 c          342 g          186 t
ORIGIN      
        1 gaccgaccgg gcccctctac ccgcgggtgc tcgacgagct cgcgccgggc gcgcggcatg
       61 tcaccgagca gtacgcgaac aacgcgatcg agtccgaccc atggccggct caagacacga
      121 ctgcggccaa tgcgcggtct caaactcctg gtctccgcgc gcaccatcac cgctgggcag
      181 gcgttcatac agaacctgcg ccgcggccac tacgcaatca ccgccgatct accggcgcac
      241 gatcgggtcc gcgtcgcgtt caacgagctc gctatgaccc tctaaccaga gcgaattgcc
      301 ggcaagtcct gttccggcag gctcggcctg cgccaacgca acagacatcc caggttttgg
      361 tttgtcaagc tgcggccgtg tggtggtggg cccaggcggt gttttcgtcg tagagggtgc
      421 cggtcttcag gcagccgtgc aggatgccga cgagcagacg ctgcgcaacc gcagaatgtg
      481 acgggtccgg tcccagatca ggctctggtg acttcgggcc accagcttga tcgcctcacc
      541 cagctcggag tcaccggcca ccggccggtg atgcgcgcga tccaagcgca cgatctcggc
      601 tagcacgtgc gcatccccgg aatcagactt cgcaccggag gtggagtgcc gctcccggta
      661 acgagccacc gacatcgggt tgatcgcgaa cacttcatag ccggcagcga tcaacgcctg
      721 cacccacgga ccgcgttcgg tctcgatccc gaccttgacc cgcgacgctg cttgtgcagg
      781 ttcgagctcg gcccactcct ccgggaagaa ctgcgcaatc aacgcatgca gtcgggtgat
      841 cccgtccaga ccttccggta accgtctgcg ggccaaccgg cgaccctgcc cgttcaccat
      901 ctccacatcg tgatgatccg cggcccagtc gttaccgacg aacaacatcc ataacctccc
      961 gcgtgctcgt ccggacaaaa ccagcagcgc ggaggagaca gccagcgccc taatggtcaa
     1021 gtgctcacca gaacaagccc ggggcacgac atcccagcag cggttacatc tcctcacgac
     1081 cagcaggcgc acagtctgtt gcaagacctc accgacgatc agcgccctag agtgctgacc
     1141 cgccagccgc taccaaaacc gagcctgcca aacagccccg gcacaagcca ttagcgccc
//
LOCUS       DASRPQ010001800         1556 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2753588, whole genome shotgun sequence.
ACCESSION   DASRPQ010001800 DASRPQ010000000
VERSION     DASRPQ010001800.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2753588"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1007
                     /locus_tag="VFD73_20455"
     CDS             <1..1007
                     /locus_tag="VFD73_20455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76342.1"
                     /translation="LTLNAFNSNAAWDTTVAELDMLRVAEGTGQTYFGLVHVDYGAGV
                     NGIGYVGVPTAVGSDAPAEVQRVVAHELGHTWGRWHSPCGSPGGLDPFHQYPYPGGII
                     GAFGFDVTAGVVKDSLRPDIMSYCPNEWISDYTYKNVLGFRALNPSASLGSLQPSLIV
                     WGHIVNGRPVLEPSFRLVTRPNLPTKAGPYTLEARAADGSRLFGFSFDAAVAADGSKD
                     SRHFAFAIPLASGVALQSLRLSGPAGGSEVQAPAAAAGLQRRAAPDEIGIEPAVGGAM
                     LKWNAATHPMIMVRDPDTGEVLSLLRGGTAMVQTAKREVVLEVSDGIGSHRLRRAISR
                     "
     gene            complement(977..>1556)
                     /locus_tag="VFD73_20460"
     CDS             complement(977..>1556)
                     /locus_tag="VFD73_20460"
                     /inference="COORDINATES: protein motif:HMM:TIGR02777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase ligase N-terminal
                     domain-containing protein"
                     /protein_id="HZI76343.1"
                     /translation="ELDGVMKSWAVPKGPSLDPSIKRLAMEVEDHPIEYNTFEGTIPE
                     GEYGGGTVMLWDRGTYTYGGSDPDPLEGLRNGFRKGDFKFILQGKRLKGSWVLVRTRR
                     DPRGRAQWLLIKHKDEYASPGSDVTAEYQTSVATRRTMEEIAGGKSRVWHSNRGSADA
                     DGDSTKSASRGASKAPDAKQSAYQRLIARRSR"
BASE COUNT          265 a          484 c          497 g          310 t
ORIGIN      
        1 atctgacgct caacgcgttc aatagcaacg cggcgtggga taccacggtt gccgaactcg
       61 acatgctccg cgtggcggag ggaacggggc agacttactt cgggttggtg cacgtggatt
      121 acggagcagg agtcaacgga atcggctacg tcggggttcc gaccgctgtc ggctccgatg
      181 cgcccgccga agtgcaacgg gtcgtcgctc acgagctggg gcacacctgg ggccgctggc
      241 acagcccctg tggtagtccg ggtggcttag acccgttcca ccagtatccc taccctggcg
      301 ggatcatcgg tgcgttcgga ttcgacgtga cggcaggtgt ggtcaaggat tcgttgcggc
      361 ccgatatcat gagctactgc cccaacgagt ggatcagcga ctacacctat aagaacgttc
      421 tcggcttcag agctctcaac ccatctgcat ctctcgggtc gctgcaacca tccctgatcg
      481 tgtggggaca tatcgtcaat ggcaggccgg tgctggagcc atccttccgg ttggtgactc
      541 ggccgaacct gccaaccaag gcgggcccct acacgctcga agctcgagcg gctgatggca
      601 gcaggctctt tgggttctcc ttcgatgctg cggtggctgc cgacggttcg aaggacagcc
      661 ggcactttgc cttcgccatt ccactcgcga gcggggtggc gctacagagt cttcgcttgt
      721 ccggcccggc aggtggcagt gaggtccagg ctcccgcagc agcggcggga ctgcagcgaa
      781 gagctgcgcc ggatgagatc gggattgagc cggccgtcgg aggcgcaatg ttgaagtgga
      841 atgccgcgac tcacccgatg atcatggtgc gcgatcccga caccggagaa gtgctatccc
      901 tgctacgggg agggacagcg atggtgcaga cagccaagcg cgaggttgtc ctggaggtct
      961 ccgacgggat cggcagtcac cgactccggc gggcgatcag ccgctgatac gctgactgtt
     1021 tggcgtcggg agccttggac gccccccgcg aagcagattt cgttgaatcc ccgtcggcat
     1081 cggcggagcc gcggttggag tgccagaccc ggcttttccc gccagcgatt tcctccattg
     1141 tgcggcgggt ggccacagag gtctgatact ccgcggtaac gtcggacccg ggcgaggcgt
     1201 actcgtcttt gtgcttgatc agcagccact gcgcgcgccc tcgaggatcc cgtctggtcc
     1261 tgaccaggac ccacgatccc ttgagacgct tgccctgcag gatgaacttg aaatcgcctt
     1321 tgcggaatcc gttccgtaga ccctcgagcg gatcgggatc actcccgccg taggtgtagg
     1381 tcccccgatc ccacagcatc accgtcccac caccgtactc gccttccggg atggtccctt
     1441 cgaaggtgtt gtattcgatc ggatggtcct cgacttccat cgccagtcgt ttgattgaag
     1501 gatcgaggct cgggcccttg ggcacggccc agctcttcat cactccgtcg agttcc
//
LOCUS       DASRPQ010001801         1022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_836679, whole genome shotgun sequence.
ACCESSION   DASRPQ010001801 DASRPQ010000000
VERSION     DASRPQ010001801.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_836679"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..757)
                     /locus_tag="VFD73_20465"
     CDS             complement(<1..757)
                     /locus_tag="VFD73_20465"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HZI76344.1"
                     /translation="MSKGTGKEVTRSTRITPRALSRVFGRAVSGWWNDNVPRMGASLA
                     YYTLFALAPVLVVAIAIGGLVFGAAAVRGEIVAQIQGLVGRQGGQAVEAMLGGASRPG
                     TSILATAAGVLTFFLGATGAFLELQTSLNTIWRVKPKNDGSFLRALLMQRVISFGLVV
                     ALGFLLLTSLLVSAALAAIHNYLGTSFPGIVVLWEALNVLVSLAVITLLFALIYKVLP
                     DVKLAWRDVWVGALVTAGLFSIGKLVIGLYLGTT"
     gene            complement(754..>1022)
                     /locus_tag="VFD73_20470"
     CDS             complement(754..>1022)
                     /locus_tag="VFD73_20470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76345.1"
                     /translation="APSAAAVSPAQARERFGAFGAYYLPAGGNRLLADSVTLVNVLPK
                     VLDYYLGAAIDPSPDDLYMSTEPQPYDFVKVDPHRLVPTLAHEP"
BASE COUNT          223 a          323 c          312 g          164 t
ORIGIN      
        1 tggtagttcc gagatacagc ccgatgacca gcttcccgat gctgaacaac cccgccgtca
       61 ccagtgctcc cacccagaca tcgcgccagg ccagtttcac gtctggcaag accttgtaga
      121 tcagggcgaa cagcagggtg atcacggcca gggagaccag aacgttcaat gcttcccaga
      181 gcacgacaat tccggggaac gaagtgccca aatagttgtg aatcgcggcg agcgcggcac
      241 taaccaaaag tgaggtgagt aacaggaacc cgagagccac caccaggccg aatgagatga
      301 cgcgctgcat caggagggcc cggagaaagc tcccatcgtt tttcggcttg acccgccaga
      361 tcgtattcaa ggaggtctgg agctccagga aggctccggt cgcgccgaga aagaaggtca
      421 gcacgcccgc tgccgtagcg aggatgctgg tgcccggtct ggacgcccct cccaacatag
      481 cctcgaccgc ctgtccaccc tgacgcccga ccaggccttg gatctgggcc acaatctcac
      541 cgcgtacggc cgcggcgccg aataccaatc ctccaatggc aatcgcgact accagcaccg
      601 gggccaaggc gaacagggtg tagtaagcca gcgaggctcc catccgggga acgttgtcat
      661 tccaccaacc tgacaccgcc cgaccgaaca cgcggctcaa tgcgcgaggc gtgatccggg
      721 tagagcgagt cacttcttta ccggtgccct tgctcatggt tcgtgagcga gggtcggcac
      781 caatcgatgc gggtctacct tcacaaagtc gtacggctgt ggctcggtcg acatgtagag
      841 gtcgtcagga gacgggtcga tcgccgctcc caggtagtag tcgaggacct tcggaaggac
      901 gttcaccaga gtgacagagt cggccaggag gcgatttcct ccggcgggca ggtagtacgc
      961 accgaatgcc ccgaatcgtt cccgggcctg cgcgggggat acggccgctg cactgggcgc
     1021 cc
//
LOCUS       DASRPQ010001802         2259 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3974560, whole genome shotgun sequence.
ACCESSION   DASRPQ010001802 DASRPQ010000000
VERSION     DASRPQ010001802.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2259
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3974560"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..417)
                     /locus_tag="VFD73_20475"
     CDS             complement(<1..417)
                     /locus_tag="VFD73_20475"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HZI76346.1"
                     /translation="MANSVVLLLLMTLFTSREVFQALEFSPSAALSHPWTFVSYMFVH
                     GGLLHLFGNMLALYVFGTAVESRMGSRNFLLYYLFCGIGAAVFSLLLAGVMAVGPFVG
                     ASGAVLGVAVAFAMFWPDAELIVFPIPVPIKARTLVI"
     gene            complement(497..1516)
                     /locus_tag="VFD73_20480"
     CDS             complement(497..1516)
                     /locus_tag="VFD73_20480"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HZI76347.1"
                     /translation="MRITVLTGGTSSERDVALASAVQVVAALRSRGHEVAVVDTARGY
                     IPESDEPGLLSGVVGTEPPSIAQLRSLERGLLLSGLANLAVVRDADVLFLALHGGRGE
                     DGTIQTLLEMVGVPYTGSGRLGSAMAMDKDISKRLFRLAGVPTADWVMAPAARADVGR
                     QFGWPVVVKPSKQGSTVGLTVVKNPPDYEPAVSLARQYDDEVMIERFVPGRELTVGIL
                     EGRALAVGEIIPRHEIFDYECKYTPGMSQEIFPADLPSSTTQECCRLGVLAHEALKLG
                     GYSRVDFRLTPEGELFCLEVNTLPGMTATSLMPQAASAVGINFPELCERICRVARRGP
                     PEDLS"
     gene            complement(1552..>2259)
                     /locus_tag="VFD73_20485"
     CDS             complement(1552..>2259)
                     /locus_tag="VFD73_20485"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HZI76348.1"
                     /translation="EGHPYKVEGIGGDKIPSTLWFDWIDEFRQVPDRVSLVTARRLAR
                     EEGILAGGSTGLNVALSLELARELDNPDALIVTILCDTGERYLSKVFNDEWMQENQML
                     EPPRTTVEQLLERRHPTAPPLVSVAPAAAVRQALNLMSTWGVSQIPVVEDGKSVGGLV
                     EGSLMTKALAQPALLDRPVREIMEPPFPEVDAGFSTDRLGIMLTRESPAALVRKDGKL
                     IGIVSRYDVLQQLIGTR"
BASE COUNT          464 a          738 c          679 g          378 t
ORIGIN      
        1 gatcacgagg gtccgggcct tgatcggcac cgggatgggg aacacaatca gctccgcgtc
       61 gggccagaac atggcgaagg ctaccgcaac gccaaggacg gcaccggagg cgccgacaaa
      121 cgggcctacc gccatgacgc cggccagcaa cagcgagaac acggccgcgc cgataccgca
      181 gaaaaggtag tacagcagga aattgcggct tcccatccgg ctttccaccg cggtgccgaa
      241 cacgtacagc gcgagcatgt tgccgaacag gtgcagcaac cctccgtgca cgaacatgta
      301 gctcacgaag gtccacggat ggctgagcgc ggctgaggga gaaaactcca gcgcctggaa
      361 cacctcgcgg gaggtaaaca gggtcatcag gagcagcagc accaccgagt tggccacgat
      421 gaggcggcca acccacggag taattcggta tgaaggagat gatctcatcg gacagacctt
      481 ttactgaacc caatgcctac gagagatcct caggcgggcc gcgccgagcg actcgacaga
      541 tccgttcgca caattcgggg aagttgatac cgaccgccga agcggcctgg ggcatgaggc
      601 tcgtggcagt catcccaggc aacgtgttta cctctaaaca gaagagttcg ccttccggtg
      661 tcaagcgaaa atccacccgg gaataacccc ccagcttgag tgcttcgtgt gccagcacgc
      721 caagacggca gcattcctgg gtggtgctgg agggcaggtc ggctgggaag atttcctgcg
      781 acatcccagg agtatacttg cattcgtagt cgaaaatttc atgccgggga atgatttctc
      841 ccaccgccaa cgctcggccc tccagaattc ccaccgtcag ctcgcggccc ggcacaaacc
      901 gctcgatcat gacctcatcg tcgtactggc gagccagcga gaccgcaggt tcgtaatcgg
      961 gcgggttctt gaccacagtc agccccacgg tcgacccctg cttcgagggc ttgaccacga
     1021 ccggccatcc aaactgtcga ccgacatcgg cgcgcgctgc gggcgccatc acccaatccg
     1081 ccgtgggtac accggccaac cgaaagagcc gcttggaaat gtccttgtcc atggccatgg
     1141 cactgcccag gcggccactc ccggtgtagg gaacgccgac catctccagc agcgtctgaa
     1201 tggtcccgtc ctctccccgg cccccatgca gtgcaaggaa cagcacgtca gcgtcacgga
     1261 cgactgccag attggccagc ccggaaagaa gaaggccccg ctccagcgag cgtaattggg
     1321 caatcgacgg tggttcagtg ccgaccactc ccgagaggag accgggttca tcggactcgg
     1381 ggatgtagcc acgtgcggtg tccaccaccg ccacttcatg gccccgggac cggagcgccg
     1441 ctaccacctg aaccgcggaa gccagcgcga cgtcacgttc gctcgaggtg ccgccggtga
     1501 gtacggttat ccgcatggtc gtcctcgggg acgggagcgc accgcttcgt cttaacgggt
     1561 gccgatcagc tgctgaagta cgtcgtaccg gctgacgatt ccaatcagct tgccgtcctt
     1621 ccggaccagc gccgctgggc tctcccgggt cagcatgatg ccgagacgat cggtggaaaa
     1681 tccggcgtcc acttcgggaa aaggcggctc cattatctca cgtactgggc ggtcgagcag
     1741 agcaggttgc gccagcgctt tggtcatcag gctcccctcg accagcccgc ccaccgattt
     1801 gccatcctcc accaccggaa tctggctcac tccccaggtg ctcatcaggt tgagtgcctg
     1861 acgaactgca gccgcgggag cgacgctgac cagcggcggt gcagtcgggt gccgccgttc
     1921 caaaagctgc tcgactgtgg tcctcggcgg ctccagcatc tgattttcct gcatccattc
     1981 gtcgttaaag accttggaga gatagcgctc gccggtatca cacaggatcg tgacgatcaa
     2041 agcgtcgggg ttatccagct cccgggccag ctcgagggag agcgccacgt tgagtccggt
     2101 ggaccccccg gccagtatgc cctcttcgcg ggccaaccgt cgtgccgtca ccagcgagac
     2161 ccggtccggg acctggcgaa attcgtcgat ccagtcgaac cacagggtcg agggaatctt
     2221 gtcgccgccg atcccttcga ccttgtaggg atggccttc
//
LOCUS       DASRPQ010001803         1323 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2118265, whole genome shotgun sequence.
ACCESSION   DASRPQ010001803 DASRPQ010000000
VERSION     DASRPQ010001803.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2118265"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..447
                     /locus_tag="VFD73_20490"
     CDS             <1..447
                     /locus_tag="VFD73_20490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HZI76349.1"
                     /translation="TGYSFNLDGSTLYLAVAAIFVAQAAGAHLTLGYQLVMLLTLMIT
                     SKGVAGVPRSSLVILAGTLSHFQLPLEGVAVILGVDTLMDMGRTTINLVGNCLASVVM
                     ARWEGEFVPATTVKLEGGEAGSYASSTRVSTPLQEASRVRPPRNSK"
     gene            751..>1323
                     /locus_tag="VFD73_20495"
     CDS             751..>1323
                     /locus_tag="VFD73_20495"
                     /inference="COORDINATES: protein motif:HMM:NF020442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FRG domain-containing protein"
                     /protein_id="HZI76350.1"
                     /translation="MAISEVIVSSLGDLIDKVTPTEPDPRTGRRRDSGVYRGDADARW
                     PLLTSLDKLGGAHPPHTKAGLEEHILRNFIRYSRPYLDHPAANDWEILVTAQHHGLPT
                     RLLDWTYSPLVAAHFATLDAERGCDRVVWRLDWKKVHRFFKLPELALLIQDLEEILES
                     DGPLTPWALFSAPPDSKQFACMLEPPSLNAR"
BASE COUNT          251 a          427 c          400 g          245 t
ORIGIN      
        1 accggatact ccttcaacct cgacggctcg acactgtacc tcgcggttgc cgccatcttc
       61 gtggcccagg ccgccggcgc gcatctgacg ctggggtacc agctggtcat gctgctgacg
      121 ctgatgatta ccagcaaagg cgtggccgga gtcccccggt catcgctcgt cattctcgcc
      181 gggaccctgt cgcattttca gcttcccttg gagggcgtcg cggtcattct cggggtggat
      241 accttgatgg atatgggccg gaccaccatc aacctcgtcg gcaattgcct ggcgtcggtg
      301 gtaatggcgc gatgggaggg cgagttcgtg cctgcgacca cggtgaagct ggaaggcggg
      361 gaagcgggaa gctacgcatc ctccacccga gtcagcacac cactccagga ggcatcgcgg
      421 gtccggccac cgcggaattc gaagtgactg tccactagaa tccgctgggt gaattcccag
      481 gtgcgctgat cctggagccg atggcgcaat accaaaggaa ccagttgggc ggccaccatc
      541 cacacaccgg cttccagtcc gggatagagg tgggcccatt ccggtcgaag tcgcgcttgg
      601 cgcacggcca tacgaagtac ccgaacctgt gcaaggtcat cgcagggaga gggtgttccc
      661 gccgacgatg gacccatctg ctgcatcatc caaatctgcc gtactcgctg caaggtcgta
      721 tgtcacaccg agcccactta cattagcgca atggccatca gcgaagtcat cgtcagcagt
      781 ctgggtgacc tgatcgacaa ggtgacaccc accgagccgg atccccgcac tggacgacgt
      841 cgcgatagtg gagtgtaccg gggcgatgcc gacgccaggt ggccgctcct caccagcctc
      901 gacaagctcg gcggggccca cccaccgcat accaaggcag gcctcgaaga gcacattctc
      961 agaaacttca tccgttactc tcggccgtat ctggaccatc cggcggccaa cgactgggaa
     1021 atcctggtga cggcccagca tcacgggctc cccacccgat tgctcgattg gacctactca
     1081 cccctcgtag ccgctcactt tgccacgctg gatgccgagc gtggctgcga ccgggtggtg
     1141 tggcggctcg actggaagaa ggtccatcgg ttcttcaagc tgcccgagct ggcgctactg
     1201 attcaggatc tggaagagat actggagagc gatggcccgc tgaccccgtg ggcactgttt
     1261 tccgcgcccc cggattcgaa acagttcgcc tgtatgctgg agccgccatc cttgaacgcg
     1321 cgg
//
LOCUS       DASRPQ010001804         1001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_520896, whole genome shotgun sequence.
ACCESSION   DASRPQ010001804 DASRPQ010000000
VERSION     DASRPQ010001804.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_520896"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            374..>1001
                     /locus_tag="VFD73_20500"
     CDS             374..>1001
                     /locus_tag="VFD73_20500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HZI76351.1"
                     /translation="MLAVSGSEQPGTSSMIRGLAACFTGLEDPRETSRCDHQLIDILV
                     IAVCAVIACAESWEDIALYGRSKQTWLATFLALPNGIPSHDTFRRVFMLIDPDAFEGC
                     FSRWVQAWAHGFKREGVAVDGKTVRRSGSRRHDHGPLHVVSAWASEQGLALGQRAVNG
                     QSNEITAIPELLETLHLEGCIVTLDAMGCQKDIAAQIRAKGADYLLVLK"
BASE COUNT          184 a          308 c          344 g          165 t
ORIGIN      
        1 accgcatccg cgtccgcccc cttcgtgagg ggcggcccta tacctaactg aggccccctc
       61 agccaggggc agggatgcga gcccggacag aacctcgagg aagagcgatg ctgacgcgcc
      121 ggggttcagg gccataacag ttacggatcg ctagaccatg ggtcgcgggg tccttggaga
      181 ccgcccaccc gactgcggga cacgcccgac cgcgacggcc cgctagcgac agaactgcat
      241 agggggaagt ccgcaatatg ggctcaaggc gccgggctcg cgccgacata ggcttaagga
      301 cgtcatcgtc cgtccgagag cacaggttta tacttgctgg cgcgagccct gacagaaccg
      361 tcgattgagg acggtgctgg ccgtttccgg ttcggagcaa ccggggacga gcagcatgat
      421 cagagggttg gcagcgtgct ttacagggct ggaggatccg cgcgagacga gccggtgcga
      481 tcatcagctt attgacatcc tggtgatcgc ggtctgtgcg gtgatcgcct gcgccgagag
      541 ctgggaggac atcgccctct atgggcgcag caagcagacc tggctggcga cctttttggc
      601 cctgccgaat ggcatcccct cccacgacac cttccggcgc gtgttcatgc tgatcgaccc
      661 ggacgcattc gaggggtgct tctcccgatg ggtgcaggcc tgggcgcatg ggttcaagcg
      721 tgaaggggtc gctgtggacg gcaaaaccgt ccggcgctcg ggcagtcgtc gccacgatca
      781 tgggcccctg cacgtggtca gcgcctgggc cagcgaacag ggactggcgc tcggccaacg
      841 cgccgtcaac ggtcagtcga acgagatcac ggcaatcccg gagttgctgg agaccctgca
      901 cctggagggc tgcatcgtga cgctggatgc gatgggctgc cagaaggaca tcgccgcgca
      961 gatccgggcc aagggcgccg actatcttct ggtgctcaaa g
//
LOCUS       DASRPQ010001805         1636 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3027337, whole genome shotgun sequence.
ACCESSION   DASRPQ010001805 DASRPQ010000000
VERSION     DASRPQ010001805.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3027337"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..445
                     /locus_tag="VFD73_20505"
     CDS             <1..445
                     /locus_tag="VFD73_20505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76352.1"
                     /translation="PAARNPGAAAGATLFALLWGAAAWALIHYKAPLVFPVVFGLTEL
                     IVIWISLRMWLGVSRVTVRPGTLLLASGLGYPYRQRTLPASAIADITVAIGMQAGAVP
                     YYDLVVRQKDGTKVTAGSSVREKREAEWLAVTLKGALGLPATPPS"
     gene            complement(447..923)
                     /locus_tag="VFD73_20510"
     CDS             complement(447..923)
                     /locus_tag="VFD73_20510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76353.1"
                     /translation="MKAGIIASMLSLVSLASCGGGHPVEINPDAQSVATRWNGTLSTP
                     PQLVGVSEVRGQAWMGGDPKDPGQTQAHVEISNAVPGGRHPWHVHRGQCGSDQGPLGP
                     ADAYKPLEVAGNGRASETAVLPVPFPHTGSFFVQVHASARNMGTIMACGNLAPPAR"
     gene            complement(1017..>1636)
                     /locus_tag="VFD73_20515"
     CDS             complement(1017..>1636)
                     /locus_tag="VFD73_20515"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HZI76354.1"
                     /translation="AGSRVFEVNKSEDTKTVNAYVTGIGNTKRIVLWDTILQKLDSDQ
                     VAFVVSHEIGHFVLGHVRSAIVLVTLLVTGSLYVVHRLAAPFIDRFAPRFGFTDLADV
                     ASFPLLVLLASAVSFLVSPAMLAFSRHQEHEADRFGLELTRDNWSAATAFVRLQQENL
                     SIPRPGRLFIFWRASHPSLGDRVDFANQYRPWECGQPLHYAQLFR"
BASE COUNT          318 a          510 c          519 g          289 t
ORIGIN      
        1 tccggctgcg cgaaaccccg gtgcggcagc cggagctact ctcttcgcgc tgctctgggg
       61 cgccgccgcc tgggccctta tccattacaa ggcgccgctc gtcttcccgg tcgtgttcgg
      121 tctgaccgaa ctgattgtta tctggatttc tcttcgaatg tggctgggag tgagccgggt
      181 aaccgttcgc ccaggaacgc tgctgctggc aagcggcttg ggatatccct ataggcagcg
      241 cactctgccg gcgagcgcaa tagccgacat aacggtcgcg atcgggatgc aggcgggcgc
      301 ggtgccctac tacgacctgg tcgtccgaca gaaagacggg acaaaagtga ccgccggcag
      361 ctcggtccgc gaaaagcggg aggccgagtg gctggcggtc actctgaagg gcgcgctagg
      421 tcttccagca acaccgccga gctgaattac ctggctggcg gtgcgagatt cccgcaggcc
      481 atgatcgtgc ccatgttgcg ggccgacgcg tgaacctgca cgaagaagct tccagtatgg
      541 gggaacggca ccggcaacac cgccgtttca ctggctcgcc cgttacccgc cacttccagt
      601 ggcttatagg catcggcagg acccaatgga ccctggtccg atccacactg gccccggtgg
      661 acgtgccatg ggtgccgtcc tcccgggacg gcattggaga tttccacgtg cgcctgggtt
      721 tgcccgggat ccttcgggtc accccccatc cacgcctgcc ctcgcacctc tgacacgccg
      781 accaactggg gtggtgtcga cagtgtgccg ttccaacgag tcgcgaccga ttgagcgtcg
      841 gggttgatct cgaccgggtg tccgcctcca caggaggcga gcgacacgag cgagagcatc
      901 gaagcaatga tcccagcctt catagaaagc ctcgggtgac gcggggagtt tggctgccaa
      961 gcagcgactg tatatgtcag tgatctgcga cgcctgccgt gatcagcgac acagggttac
     1021 cgaaacaact gagcgtaatg cagcggttgc ccgcattccc agggccggta ttggttggca
     1081 aaatccaccc ggtctcccag ggaaggatgg ctggcccgcc agaagatgaa cagccggccg
     1141 ggccgaggga tcgagaggtt ctcctgctgg aggcgtacga acgccgtcgc cgccgaccag
     1201 ttatctcgcg tcagctccaa gccgaagcga tcggcctcgt gctcctggtg gcggctgaag
     1261 gccagcattg ccgggctcac cagaaaggag actgcgcttg ccagcaacac gagcaaaggg
     1321 aaggaagcca catcggccaa atcggtgaag ccgaaccgtg gagcgaaccg atcaatgaag
     1381 ggtgcggcga ggcggtgcac cacgtacagc gacccggtca ccagaagagt gaccagaacg
     1441 atcgcggagc gtacgtggcc caggacaaag tggccaatct cgtgggacac cacgaacgcc
     1501 acctgatcgg agtcgagctt ctgcaggatg gtatcccaca gtacgatccg ctttgtgttg
     1561 ccgatccctg tcacataggc gttcaccgtc ttggtgtctt cactcttgtt cacctcgaac
     1621 acccggctgc cggcga
//
LOCUS       DASRPQ010001806         1101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1484118, whole genome shotgun sequence.
ACCESSION   DASRPQ010001806 DASRPQ010000000
VERSION     DASRPQ010001806.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1484118"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(41..385)
                     /locus_tag="VFD73_20520"
     CDS             complement(41..385)
                     /locus_tag="VFD73_20520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76355.1"
                     /translation="MKMLSLTVGLVAAFAATGVSAQTADLSGRYNCIAMCRGELQPYI
                     TQNGPELNVVTEAGIPSRAWPDWNFPNTRIWVEALIQSAVYTPDGLVIQFDSGTVWRR
                     DLPPPPPVRRRR"
     gene            complement(637..>1101)
                     /locus_tag="VFD73_20525"
     CDS             complement(637..>1101)
                     /locus_tag="VFD73_20525"
                     /inference="COORDINATES: protein motif:HMM:NF040065.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76356.1"
                     /translation="QPRSWTDHLLWHHAAHTVDLYAYQARSPIVKANAVQGPIHPALG
                     IAMDMSIQLKTANGAICTLSLSFNNDGPLGTFFRYIGDTGTYIARYDDLVNGKEEKID
                     VSKVDVSMNGIELQDREFFAAIREGREPNSSVAQVLPCYQVLHDLEKQLAAG"
BASE COUNT          196 a          330 c          377 g          198 t
ORIGIN      
        1 tgacgaggtc acgcgccgtt ggagatctct cgggcgacga tcagcggcgc cgacggaccg
       61 gcggcggtgg cggaagatcg cggcgccaga cggtgccgct gtcgaactgg atcaccaggc
      121 cgtccggggt gtagaccgcg ctctggatca gggcttcgac ccagattcgc gtattcggga
      181 aattccagtc cggccaggcc cgcgagggaa tgccggcctc ggtcaccacg ttcagctcgg
      241 ggccgttctg ggtgatgtag ggctgcaatt cgccccggca catcgcgatg caattgtacc
      301 tgccggagag atcggcggtt tgcgcggaaa ccccggtcgc agcgaacgcg gccacaaggc
      361 caacagtcaa agacagcatt ttcatgaaaa tactccacta ctatacgtgg tggaggttac
      421 accgagtggc ggctgcagtg aaggtaccca ccctcccctg gaaggggagg gtcgctcaca
      481 tgaagcggag cggaatgtga gcggggtggg gtgaaggtgc ctctactcag ggactgatcg
      541 ggtgggagag actgtcaccc caccccgctt cgcattgcgc ttcgctgcat gcgaagcgac
      601 cctccccctc caggggaggg tgaagagcgg cgcgccctac cccgccgcca gctgcttctc
      661 gagatcgtgc agcacctggt agcagggcag cacctgggcc acgctcgaat tcggctcgcg
      721 gccttcgcgg atcgcggcaa agaactcgcg gtcctgcagc tcgatgccgt tcatggacac
      781 gtcgaccttg gagacgtcga tcttctcctc cttgccgttc accagatcat cgtatcgcgc
      841 gatgtaggtg ccggtgtcac cgatatagcg gaagaaggtg ccgagcgggc cgtcattgtt
      901 gaaggagagg ctcagcgtgc agattgcgcc gttcgcagtc ttgagctgga tcgacatgtc
      961 catcgcgatg ccgagcgccg ggtggatcgg tccctgcacg gcgttggctt tcacgatcgg
     1021 cgagcgcgcc tggtaggcgt acaggtcaac cgtgtgcgcg gcgtggtgcc agagcagatg
     1081 gtcggtccag ctgcgcggct g
//
LOCUS       DASRPQ010001807         2279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1145149, whole genome shotgun sequence.
ACCESSION   DASRPQ010001807 DASRPQ010000000
VERSION     DASRPQ010001807.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1145149"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..342)
                     /locus_tag="VFD73_20530"
     CDS             complement(<1..342)
                     /locus_tag="VFD73_20530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76357.1"
                     /translation="MADNFGDRNRDEWNRSENRENREWNQGRNREQGYGYGQGYGYGQ
                     GWGQQMGQSSYGQSGYSQGSYGQGFRGEGERGYNQGYGQSGWGQGGYGQGGYGQQGYR
                     EGGYGQQGYGQG"
     gene            704..1090
                     /locus_tag="VFD73_20535"
     CDS             704..1090
                     /locus_tag="VFD73_20535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI76358.1"
                     /translation="MPTILVLDDVESRREAVSRMLRTEGYRVVPARSGIEAQWYLEQD
                     HWSADLLLTGFAPREADGYHPGLPVGALLARVPVLFMAELDRSESIRRGLIHPAAPYL
                     RHPFPPSVLRRTIREALALAAARPIN"
     gene            complement(1092..>2279)
                     /locus_tag="VFD73_20540"
     CDS             complement(1092..>2279)
                     /locus_tag="VFD73_20540"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HZI76359.1"
                     /translation="NPGWGAAFERADGGGTKYVYPGDAFTIARLKAEQNREPAAKPGS
                     VFEYTDVGHALLNYVVQRACGQKLIEIFDQHIKQAGMGSPSFVALIYTDQNQQFNQSE
                     GAALWKGQDGAAVLRLAGRNGIWDNRNVQPVRFWYALTKITGNIAAAAAQGWGVVYHN
                     NSTNLWTAGTGHKRLSQEMFGHGGNYSTVFLNDPLTSTIIVREGDNNALGASYLTTNG
                     CAIGWTGIAPSCTRGTTWSNNWGVASSVEGSTAVGPRKEIVEPLQEAFFFPPPFCRIT
                     GVARQTADNSTDVYDTPSGASTIDLDAEIRVNPREGAGSSVVDRVEFYKESDGGLVEY
                     VGKGSPLNGTSPPQYRLPYAAASHGARGEVKTYFANCIAKSTVDQTRKVPSYSRPVRV
                     RRD"
BASE COUNT          374 a          758 c          660 g          487 t
ORIGIN      
        1 tccctgcccg tatccttgct ggccgtagcc gccttctcta tatccctgct gaccgtaccc
       61 accttgtccg tatccaccct gtccccaccc ggactggccg taaccctggt tatagccgcg
      121 ctcgccctct cctctgaacc cctggccata gctgccctgg ctataccctg actggccata
      181 gctgctctgc cccatttgct gaccccagcc ctgcccgtaa ccgtaaccct gcccgtaacc
      241 gtagccctgc tcccgattgc ggccctggtt ccactctcga ttctcgcgat tctcactgcg
      301 gttccactcg tcccgattgc gatcgccaaa gttgtccgcc atatcgatcc tcctgtcagc
      361 tacagctctc caaatgaact ctccggtgct gtttctgctg ctctaccgag actccggaga
      421 cgatactcga acctcacatc cagcgaggga ccggaggata aagcgtgtgc tacttacaaa
      481 ttgtgacccg gctcactcga tcttgcatgc tgccgattct ccggcaggac acgatggccc
      541 gaagtcacag cgctgggcat ccgagcagat gcccatcgtc tcgtttcaga ggagaaaacg
      601 ctgttcaatg aagattcgcg ggccaaggca cgagcattgc ggcgatttta ttggatctca
      661 cccgaacaat ggatgatcga caccgataac ccaggagggc ggtgtgccta ccattctcgt
      721 gctggacgat gtggagtcac ggcgtgaggc ggtcagtcgc atgctcagga ccgagggcta
      781 ccgagtcgta cctgcccgga gcggcatcga ggcgcagtgg tacctggaac aggaccactg
      841 gtctgccgat ctgctgctca ccggcttcgc accacgggaa gccgatggct atcaccccgg
      901 acttccggtg ggcgcgctcc tcgcccgggt tccggttctc tttatggccg agctggatcg
      961 gagcgagagc atccggcgcg gcctgatcca tcccgccgca ccttacctcc gtcatccgtt
     1021 tcccccctca gttctccggc gcaccatccg ggaggcgctg gccctggcgg cggcgcggcc
     1081 gatcaactga gctagtctcg gcggactcgc accggtcgcg agtaggaggg gaccttcctg
     1141 gtctgatcta ccgtcgactt ggcaatgcag ttggcgaaat aggtcttgac ctcgccccgg
     1201 gcgccatgcg atgccgcagc gtagggcaac cggtattgcg gcgggctggt gccgttcagc
     1261 ggggatccct tcccgacgta ctccaccagg cctccatcgc tctccttata gaactccacc
     1321 cggtccacca ccgacgaccc ggctccctcc cgggggttga cccggatctc ggcatcgaga
     1381 tcgatggtgc ttgcgcccga aggagtgtcg tagacatcgg tcgagttgtc ggccgtctgc
     1441 cgagccactc cggtaatccg gcaaaacggc ggcgggaaga agaatgcctc ttgcaacggc
     1501 tcgacgattt ccttccttgg ccccacggca gttgagcctt ccacgctgct tgcgactccc
     1561 caattgttgc tccaggtggt tccacgggtg cagctgggcg caatgcctgt ccagccgatg
     1621 gcgcatccgt tggtggtgag ataggaggcg cccagggcgt tgttgtctcc ctcgcggacg
     1681 atgatggtgc tggtcagcgg gtcgttgagg aacacagtgc tgtagttgcc gccgtgacca
     1741 aacatctcct gggagagtcg cttatggccg gtcccggcgg tccacaggtt ggtcgagttg
     1801 ttgtggtata ccactcccca gccctgggcg gcggcggcgg cgatgttgcc ggtgattttg
     1861 gtgagggcat accagaaccg gaccggctgg acattgcggt tatcccagat tccgtttctg
     1921 ccggccagcc ggagcaccgc ggcaccgtcc tgccccttcc acaaggcggc cccctcgctc
     1981 tgattgaact gctgattttg gtcggtgtag atcagggcca cgaagctcgg tgagcccatt
     2041 cccgcctgtt tgatgtgctg atcgaagatc tcgatgagtt tctgaccgca ggcccgctgc
     2101 acgacgtagt tgagcaacgc gtgtcccaca tcggtgtact cgaagacgct accgggcttg
     2161 gcagcgggct cccggttctg ttctgccttg agccgggcga tagtgaacgc atcgcccgga
     2221 tacacgtatt tcgttccccc tccgtcggcc cgttcgaacg cggctcccca tcccggatt
//
LOCUS       DASRPQ010001808         1377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1804823, whole genome shotgun sequence.
ACCESSION   DASRPQ010001808 DASRPQ010000000
VERSION     DASRPQ010001808.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1377
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1804823"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..193)
                     /locus_tag="VFD73_20545"
     CDS             complement(<1..193)
                     /locus_tag="VFD73_20545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76360.1"
                     /translation="MALAQTSAPQCARAGRSGWSGVGLSYLCGHQRELLRKVTGGSET
                     IFWTATESAGQRFFESDRGR"
     gene            179..>1377
                     /locus_tag="VFD73_20550"
     CDS             179..>1377
                     /locus_tag="VFD73_20550"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI76361.1"
                     /translation="MCERHAVAVLPFVNLSPDTENEYFSDGMAEEIINALTQVKGLRV
                     AARTSCFALKGKDLDAQTIAERLKVNSLVEGSIRKSGNRIRLTAQLVDAADGYQRWSQ
                     TYERTMNDVFTLQEELAQAIVRELPLPGMASVQPKLVKPVTENLEAYTLYMRGRYFAN
                     RRTAENLRSAIGYFEQASALDPSSAPVHSGLAACWSLLGFEEFGELAPREAMPRAKAA
                     ALRAVELDPSDTDAHIWLGVISMLYDWEWAEAEAHFRMATDPGLNPIGHLWYAVFLAI
                     MSRHDESLARIRRAQSVDPISLPVNHTLARCYAWAGEYEKAVEQLRATLQMEPHHPLT
                     YVWLGRALVGMGRFQEALTELQRGIEIAGRLPLLLQLTGCAYGRLGMHAKAREILEEL
                     RLISTRR"
BASE COUNT          260 a          439 c          443 g          235 t
ORIGIN      
        1 ctcggccccg gtccgactcg aagaagcgct ggcctgcgct ctcggtcgcc gtccagaaga
       61 tcgtttcgct accgccggtg actttgcgca gcagctcgcg ctggtggcca cagagataac
      121 tcagcccgac cccactccag cccgaacgtc cagcccgagc gcactgcggg gcgctggttt
      181 gtgcgagcgc cacgccgtcg cggttctgcc cttcgtcaat ctcagtccgg atacagagaa
      241 cgagtatttc agcgacggaa tggcggagga gatcatcaac gcgctgaccc aggtcaaagg
      301 actccgggtg gcggcgcgaa cctcctgctt tgcgctcaag ggaaaagacc tcgatgccca
      361 gactatcgcc gagcgactga aggtgaacag cctggtcgag ggcagcatcc gcaaatcggg
      421 caaccgaatc cggctcaccg cccagctggt cgacgccgcg gatggctacc agcgctggtc
      481 ccagacatat gagcggacca tgaacgatgt tttcactctc caggaagagc tagcccaggc
      541 catcgttcgt gagctgcctc tccccggaat ggcatccgtg cagccgaagc tggtgaagcc
      601 ggtgacagag aacctcgagg cctacaccct gtacatgagg ggcaggtact ttgccaaccg
      661 gcgaaccgcg gagaatctcc ggtcggccat tgggtacttc gagcaggcga gcgcgctcga
      721 cccctcctct gctccggtcc acagcgggct tgcggcctgc tggtcgctcc ttggcttcga
      781 ggagttcggt gagctggcac cgcgtgaagc catgcccagg gcgaaggccg cggcactcag
      841 agcagtcgag ctcgatccgt cggacactga cgcccacatc tggctcggtg tgatcagcat
      901 gctgtatgac tgggagtggg ccgaagccga ggcgcatttc aggatggcga cggacccagg
      961 gctgaacccg atcgggcacc tgtggtacgc cgtgtttttg gcgatcatgt ctcgccacga
     1021 cgaaagcctg gcacgaattc gccgagccca atcggtggac ccgatctcct taccggtgaa
     1081 ccatacgctt gcccgctgtt acgcctgggc gggagagtac gagaaagcgg tcgaacagct
     1141 gcgggccaca ctgcagatgg agccgcacca tccgctgacc tatgtctggc tggggcgagc
     1201 gctggtcggg atgggccggt ttcaggaggc gttgaccgaa ctgcaaaggg gaatcgagat
     1261 cgccggccga ctgccgctcc tgctccagct caccgggtgc gcctacgggc gactcggcat
     1321 gcatgcgaag gcccgcgaga tcctggaaga gctgcgtctg atctcgacgc gccggta
//
LOCUS       DASRPQ010001809         1126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_837193, whole genome shotgun sequence.
ACCESSION   DASRPQ010001809 DASRPQ010000000
VERSION     DASRPQ010001809.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_837193"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1126
                     /locus_tag="VFD73_20555"
     CDS             <1..>1126
                     /locus_tag="VFD73_20555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76362.1"
                     /translation="HDWTESLDAFRRVVALNPRLVPAWEHIGDLATGRDRAEHSRALA
                     NLYALGYPPPGHPGFERFVRLVYAVDSAGGVIPSAQDTLADSMARFTAFSAELGPGND
                     GQELAIASPLDLLQRGFPVAQLDMNRRRLALSNLQAPVRAANLAGSAWAWATRGQWDS
                     ALVLIDQATVVYPGAFGWNLLPVESYGLAVLGAWLGTVDPIEADRRRPGALAAVARAT
                     DEAPAWSHGTRSMLRDSRGKMSWLDGLLGFARRDRRAIQTARAEAAKSGFFRADLIDR
                     SLTAFDRALGGDRKGAGRDLAKLEEECIGEENCPSMTPHIAVQRMMAAEWLREAGDAE
                     AARRLLRWQDALWLGWPWTFNDGVSAPAFLMRAQIEEQLGS"
BASE COUNT          183 a          336 c          408 g          199 t
ORIGIN      
        1 cacgactgga ccgagtcgct ggatgcgttt cgacgggtgg ttgccctgaa cccgaggctg
       61 gtgccggcgt gggaacacat cggagacctt gcgactggga gagatcgggc cgagcactct
      121 cgggccctcg ccaacctcta cgccctggga tatcctccgc ccggccatcc cgggtttgag
      181 cgattcgtgc ggctggtgta cgccgtcgac agcgccgggg gcgtgatacc atctgcccag
      241 gacactctgg cggattcgat ggctcgattc accgctttct cggccgagct cggcccggga
      301 aatgacggtc aggagctggc catcgcgtca ccgctcgatc tgctgcagag aggttttccc
      361 gttgcgcagc tcgacatgaa ccggcgaagg ctcgccttga gtaacctgca agctccggtg
      421 cgggcggcga acctcgcagg cagcgcatgg gcgtgggcga ctcggggaca gtgggactct
      481 gcactcgtgc tcatcgacca ggccacggtc gtgtatccgg gcgcgtttgg ctggaaccta
      541 ttaccggtcg agagctatgg cttggctgta ctgggggcct ggctggggac ggtggaccct
      601 atcgaggcgg atcggcgtcg gcccggagct cttgcggctg ttgcacgagc gacggacgag
      661 gcgcctgcct ggagccacgg taccagaagc atgctccggg atagtcgtgg caagatgtcg
      721 tggctggacg gattgctggg cttcgcccgg cgcgaccgtc gggcaattca gacagcccgc
      781 gccgaagccg cgaagagcgg atttttccgc gctgacctca tcgaccgatc actgacagcg
      841 ttcgaccgcg cgctcggggg agatcggaag ggggccggtc gcgatctcgc gaagctggag
      901 gaggagtgca tcggggagga gaactgcccc agcatgaccc cccacatcgc ggtgcagcgg
      961 atgatggccg ccgaatggct tcgggaagcg ggggatgccg aggcggctcg gcggctgttg
     1021 cgttggcagg acgccttatg gttgggatgg ccatggacct ttaacgacgg agtcagcgct
     1081 ccggccttcc tgatgcgggc tcaaatcgag gaacagctcg ggtcgc
//
LOCUS       DASRPQ010001810         1702 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2118849, whole genome shotgun sequence.
ACCESSION   DASRPQ010001810 DASRPQ010000000
VERSION     DASRPQ010001810.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1702
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2118849"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1679)
                     /locus_tag="VFD73_20560"
     CDS             complement(<1..1679)
                     /locus_tag="VFD73_20560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76363.1"
                     /translation="MKYGTVLKDIGVERMQFAPDGHPGVVVQYDFINNSEHERQIRFT
                     LSVKTDLLPVWLSERLGIRDAADRVSWDAATGRFLARDTRHPWFAVWGASAGRAERVS
                     DPPELPTAGQGVTAASRYRLTLAPHHTTTLTFVFAGSGRSWAEAQNTFAYLARHHDRL
                     LEQKKAHYAALIDRAKIRIPDQHLQQVYDWVKIDAEWLVRDVPGIGRGLSAGLLEYPW
                     WFGTETYSLQALLASGNVELAKQTLRLLRDQSRKFNRNGRIIHEVTTYGALSNPGNTQ
                     ETAQFILTAGRVVQWTGDRAFAREIYPAMRQGLHWLLSDRDKNHDLFPEGYGITEILG
                     LNAGVIDVAVYTQQALLATADIADLLGERTQAARDRKLAAQLERKINERFWVDQDSSY
                     ADFYGTRAQAISTAEGAVKQIELKGEDKLTARDRELIGYYQKLEAKFAAMPDTSRGWI
                     TNQNWVVITPMEMAIAPRERALRVLDRFRKGSVGEYGPYLSAVDRGAMMTISTGVAAV
                     SEANYGRTDQALWYMDKIVETFNRKLPGSMSEMMPDEGCFVIAWTMYGIVLP"
BASE COUNT          283 a          570 c          518 g          331 t
ORIGIN      
        1 ggaaggacga tgccatacat ggtccacgcg atgacgaagc agccctcgtc cggcatcatc
       61 tcggacatgg agcccggcag cttgcggttg aacgtctcga cgatcttgtc catataccag
      121 agcgcctggt cggtgcggcc atagtttgct tccgacaccg ccgccacacc ggtggagatc
      181 gtcatcatcg cgccacggtc gaccgcggag aggtaagggc cgtactcacc cacgctcccc
      241 ttccggaatc ggtccagcac cctgagcgcc cgctcgcgcg gcgcaatggc catctccatc
      301 ggggtgatta ccacccagtt ctggttggtg atccaccccc gcgaggtatc cggcatcgcg
      361 gcgaacttcg cctcgagctt ctggtagtag ccgatcagct cccggtcgcg cgcggtgagc
      421 ttgtcctcgc ccttgagctc gatctgcttg accgctcctt cagcagtgct gatcgcctgg
      481 gctctcgtcc cgtagaaatc ggcgtaggag ctgtcctggt cgacccagaa ccgctcgttg
      541 atcttccgct caagttgagc cgcgagcttc cgatcgcgtg cagcctgagt gcgctcaccc
      601 agcagatccg cgatgtcggc ggtggccagc agcgcctgct gggtatacac cgcaacatcg
      661 atcaccccgg cgttgagccc caggatctcg gtgatgccgt atccctcggg gaacaggtcg
      721 tggtttttgt ccctgtcgct caacagccag tgcagcccct gccgcatcgc gggatagatc
      781 tcccgggcaa acgcgcgatc tccggtccac tgcaccaccc tgcccgcggt caggatgaac
      841 tgggcggtct cctgggtgtt tcccggattg gacagcgcgc cataggtggt gacttcgtgg
      901 atgatcctgc cgttgcggtt gaatttccgg gactggtcgc ggagcaaccg aagcgtctgc
      961 ttggccagct cgacgttgcc actcgccagc aacgcctgga gcgagtaggt ctcggtgccg
     1021 aaccaccagg gatactccag caacccggcg ctcaaacccc ggccgatgcc gggaacatct
     1081 ctcaccagcc actcggcgtc gatcttgacc caatcgtaga cctgctgcag atgctggtcc
     1141 gggatccgga tcttggctcg gtcgataagc gccgcgtagt gcgccttctt ctgctccaat
     1201 agccgatcgt gatgtcgagc caggtaggca aacgtgtttt gggcctccgc ccacgacctc
     1261 cctgacccgg caaagacaaa ggtcagcgtc gtggtgtggt gcggtgccag agtaaggcgg
     1321 tagcgcgagg cggcggtcac tccctgtccc gcggtcggca actcaggtgg gtcgctcact
     1381 cgctctgctc tgccggccga ggcgccccag accgcgaacc acgggtgccg agtgtctctc
     1441 gcgaggaacc gcccggtggc ggcgtcccag ctcacccggt cggccgcgtc acgaattccc
     1501 agccgctccg agagccacac cggcaggagg tcggttttca ccgaaagtgt gaagcggatc
     1561 tgccgctcgt gctcgctgtt gttgatgaag tcgtactgga ccaccacccc agggtgcccg
     1621 tcgggggcga actgcattcg ctcgaccccg atgtccttca gcacggtgcc gtacttcaac
     1681 cgatttccgt agggatagtt ga
//
LOCUS       DASRPQ010001811         1066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_219589, whole genome shotgun sequence.
ACCESSION   DASRPQ010001811 DASRPQ010000000
VERSION     DASRPQ010001811.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_219589"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..440)
                     /locus_tag="VFD73_20565"
     CDS             complement(<1..440)
                     /locus_tag="VFD73_20565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76364.1"
                     /translation="MRYNRTTGLMITQMQELVRRVNEALDEPWNKHIGGPKSLGLYEA
                     VEAACMYLRQNATQEFIGDARDTSQPTISRYTAALVPIVKSVLEEFVPDAAEAIEMVR
                     GRVVLVDGTLTPCWSYEEHRELWNKKHKTTGFNAQLIALLDGSAV"
BASE COUNT          167 a          330 c          339 g          230 t
ORIGIN      
        1 acggcactcc cgtcgagcag ggctatcagc tgcgcgttga aaccggtggt cttgtgtttc
       61 ttgttccaca gctcccggtg ctcctcgtag gaccagcagg gcgtcagcgt gccgtctacc
      121 aggacaaccc gtcctctgac catctcgatg gcttccgcag cgtccggcac gaattcctcc
      181 agcactgatt tcacaatcgg caccagggct gccgtgtaac gggagatagt gggctgcgac
      241 gtgtcccgcg catccccgat gaattcctgc gttgcattct gccggaggta catgcacgct
      301 gcctctaccg cctcgtacag cccgagtgat ttcggccccc cgatatgctt attccacggt
      361 tcgtcgagcg cctcattcac gcggcggact agttcctgca tctgcgtgat catcaggccg
      421 gtggtacgat tgtagcgcaa cggttctccc gggcttgaga attctttgga cggaactctc
      481 aaattctccc gggagggccg ttgcttttct aattaccgca tgcggcgtgt cgcgaaattc
      541 cctgagatgt tacgccgcgc ccgagatgtg cctcagtaag gtgttttgaa taacgcacat
      601 ggtagttccg ttccgtcggc cggcgtcggt cgggtgaacg ggactccggg ccgggtgtgc
      661 aggagcagga catcccaggg cggttgccga ggaccttgcc ggtgctggtg gttcccgctc
      721 aggatttcgc gcccgcgcgc cgtggtcatc ggtgccagcg ccaatgtgcg caccccgcca
      781 acagcatcgt ccgggtcccg ggtagctgcg atgcgctccg cgggtcccgg cggcgatgct
      841 ggagctgatg gcgcggcttc tcgccggcgc gggtgggccg ccaccggatt ggagggccag
      901 atgacgttcc ttgactgccc ggcgtatttc gatgaggagg gctcggtaag gtgtggcctg
      961 cctgctgagg tggaggaccg atacacccaa gaatcagctg gcggcccgct tgatagcgct
     1021 gaaatcatgt gcccgcgcgg tcattagttc cattaccgcc ggggcc
//
LOCUS       DASRPQ010001812         1336 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2754535, whole genome shotgun sequence.
ACCESSION   DASRPQ010001812 DASRPQ010000000
VERSION     DASRPQ010001812.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1336
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2754535"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..959
                     /locus_tag="VFD73_20570"
     CDS             <1..959
                     /locus_tag="VFD73_20570"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HZI76365.1"
                     /translation="SAVMILDPRDVVTGHNDSTLSVWNLPGAQLLGKRIQTTEIMLRC
                     PELAVRLETIRQPGAEPVSFQCRLRLDSEERTLFLTLRQIRSEGGERTGTILYTEDLT
                     VQERLQTTVEQLEATGEELQSANEELETTNEELQSTNEELETTNEELQSTVEELETTN
                     EELQSTNEELETMNEELQSTNEELQTLNDELRQRGEDLNTSNAFLESVLSSLRGGVAV
                     VDEELRVLAWNDQAAELWGLRGDEVDGKHLLNLDIGLPLDRVRPLLRKCLGGDAKNQV
                     ITVDAVNRRGKSIQCQVTCTPLVGSHDGVRGAILLMEEPNGQ"
     gene            949..>1336
                     /locus_tag="VFD73_20575"
     CDS             949..>1336
                     /locus_tag="VFD73_20575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76366.1"
                     /translation="MASERPLRIAEEGEEQRDVSEEVRESAELAREAHEQERDRAEQS
                     RALQEQRRQTGEIYRESAEGNRTMAEELREAHEQLRSSAEEARRAAEELRTASEIALK
                     AAYDQVALMQEMRDTLLQYEAQFYSRA"
BASE COUNT          296 a          385 c          456 g          199 t
ORIGIN      
        1 aatctgctgt catgatcctg gacccgcgcg atgtcgtgac tgggcacaat gactcgacgc
       61 tctcggtgtg gaacctgccc ggcgctcagt tattgggaaa gcggatccag accacggaaa
      121 tcatgctgcg gtgtccggaa ctggctgttc gcctcgagac catccgccag ccgggcgcgg
      181 aaccggtcag tttccagtgc cggctgaggc tcgattccga ggaacgaacc ctattcctta
      241 ctctgcggca gatcaggtct gaagggggcg aacgcaccgg gacgattctc tacacagagg
      301 acctgacggt tcaggagcgg ctgcagacta cagtcgaaca gctggaagcc accggcgagg
      361 aactgcagtc agccaacgaa gaactggaaa caacgaacga ggagctgcag tccaccaacg
      421 aagagctgga gacaaccaac gaggagttgc aatcgacggt ggaggagctc gagaccacca
      481 acgaggagct ccagtcgacc aatgaagagc tggagacgat gaacgaggag ctccagtcca
      541 ccaacgagga gctccagaca ttgaacgacg agctgcggca acgcggtgag gacctcaata
      601 cctccaatgc gtttctggag tcggttctct ccagcttgcg gggcggcgtc gcggtcgtgg
      661 atgaagagct ccgggtgctc gcgtggaacg atcaggcagc cgagctgtgg gggcttcgcg
      721 gcgacgaggt cgatggcaag catcttctga atctggacat cggtcttccc ctcgaccggg
      781 tacggcccct gctccggaaa tgtcttgggg gtgatgccaa gaaccaggtc atcacggtgg
      841 acgcggtgaa ccggcggggc aagtcgatcc agtgccaggt cacctgcacc ccgctcgtcg
      901 ggagccacga cggcgtgcgt ggtgcaatcc tgctcatgga agagcccaat ggccagtgag
      961 cggccgttgc gaatcgcgga ggaaggtgag gagcagcggg acgtctccga ggaggtccgc
     1021 gagagcgccg agctggcccg ggaggcgcac gaacaggaac gagaccgagc cgagcagtct
     1081 cgagccctgc aggagcagcg ccgccagacc ggggagattt accgcgagtc tgccgaaggg
     1141 aaccgcacga tggcggaaga gctgcgggag gcgcacgagc agctcagaag cagcgccgaa
     1201 gaggcccgcc gggcggcgga agagcttcgc acggccagcg agatcgctct caaggccgcg
     1261 tacgaccagg tggccctcat gcaggagatg cgggatacgc tgctgcagta cgaagcccaa
     1321 ttttattctc gtgccg
//
LOCUS       DASRPQ010001813         1799 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3975412, whole genome shotgun sequence.
ACCESSION   DASRPQ010001813 DASRPQ010000000
VERSION     DASRPQ010001813.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1799)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1799)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1799
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3975412"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..344
                     /locus_tag="VFD73_20580"
     CDS             <1..344
                     /locus_tag="VFD73_20580"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HZI76367.1"
                     /translation="ISCELDVSTGGTYRLEMGHPSSEQPMAFFGRYIEVTPNSRLVWT
                     NDEGGEGGAVTTVTFEKKGDATLVVIHELYPSKEALDEAIASGSPTGWGEQFEQLDEL
                     LVAQGASVGRS"
     gene            512..1652
                     /locus_tag="VFD73_20585"
     CDS             join(512..943,945..1652)
                     /locus_tag="VFD73_20585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611351.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI76368.1"
                     /translation="MTKKYRVTLTRAEREELERLLARGKADIRKIKHAQILLKADEAD
                     GGPAWPDARIAEAFAAGITTVERVRQRFVEEGLASALSPYRGGKRIYERKLDGAQEAH
                     LIALACSPPPDGQARWTLRLLAQRMVELAYVDTLSYETVRQTLKKNALKPHRRKMWCI
                     PDKPSAEFVDHMEDVLEVYHRPYDPKRPVVCVDETFKQLIGETREPLPMRPGTVERYD
                     YIYTRNGVASLFLACEPLAGWRHLAVTDHRCRSDWAVFIRALLEGRYRDAEKLVLVMD
                     QLNTHSPASLYEAFPPEEAKRLADRLEIHHTPKHGSWLNQAEIELSVLARQCLSRRIA
                     HQDTLERQIEGWEERRNAASPQIKWQFTTQDARIKLRSLYPSAHA"
BASE COUNT          339 a          580 c          573 g          307 t
ORIGIN      
        1 tcatctcctg cgaactcgat gttagcacag gcggcacgta ccgcctcgag atgggccacc
       61 cgtcatcgga gcagcccatg gcgttcttcg gccggtacat cgaagtgacg ccgaactccc
      121 gcctcgtctg gaccaatgac gaaggtggtg aaggaggagc tgtcaccacg gtgaccttcg
      181 agaaaaaggg tgacgcgacg ctggtggtca ttcacgagct ctacccttcg aaagaagccc
      241 tcgacgaagc aattgcctct ggcagcccga ctgggtgggg cgagcagttc gagcaactgg
      301 atgagcttct cgtcgcccag ggcgcgagcg tggggcggtc atgacgtcgt cgatttctcg
      361 gtcggccgcc gtcccgccaa accgacccca tctcgccgct gccttcattg actcatggtc
      421 atcaactcgc cctagtcctc tgtcaggcgt gagctgatgg ggtgggttgt aggttcatat
      481 tgtgggagcc tgtcgagacc ggaggccggc catgactaag aagtaccggg tgaccctcac
      541 ccgtgccgaa cgggaggagc ttgaacggct gctggcgcgg ggcaaagccg atattcgcaa
      601 gatcaagcac gcccagatcc tgctcaaggc cgatgaggcc gacggcggac ccgcttggcc
      661 ggatgcgcgc atcgccgagg cattcgcggc agggatcacg accgtggagc gcgtgcgcca
      721 gcgctttgtt gaagaggggc tcgcctccgc gctgagcccc tatcggggtg gcaagcgcat
      781 ctacgagcgc aagctcgatg gcgcccagga agctcacctg atcgcgctgg cctgctcacc
      841 tcccccggat ggacaggcac gctggacgtt gcggcttctg gcccagcgca tggtggaact
      901 ggcctatgtc gacacgctct cctacgagac cgtgcgtcag acgcttaaaa aagaacgccc
      961 tcaaaccgca ccgcagaaag atgtggtgca tccccgacaa gccctcggcc gagttcgtcg
     1021 accacatgga agacgtgctg gaggtctacc accgcccgta cgaccccaag cgtcccgtcg
     1081 tgtgcgtgga cgagaccttc aaacagctga tcggcgagac ccgcgagccg ctgccgatgc
     1141 ggccggggac ggtcgagcgc tatgactaca tctacacccg caacggcgtg gcgagcctgt
     1201 tcctggcctg cgagcccctc gcgggctggc gccatctggc ggtgacggac caccgctgcc
     1261 gaagcgactg ggccgtgttc atccgtgcgt tgctggaggg gcgctaccgg gacgccgaga
     1321 agctggtgct ggtcatggac cagctcaaca cccattcccc ggccagcctc tatgaggcgt
     1381 tcccgccgga ggaggccaaa cggttagccg accgccttga gatccatcac acacccaagc
     1441 acggctcctg gctgaaccag gctgaaatcg agctgagcgt cctagcgcgc cagtgcctgt
     1501 cgcgccgcat cgcccatcag gacaccctgg agcgccagat cgaaggctgg gaggagaggc
     1561 gcaacgccgc cagccctcag atcaagtggc agttcacaac ccaagatgct cgtatcaaac
     1621 tccgaagcct ctatccatca gctcacgcct gacagaggac tagtgggtca tttgctatgg
     1681 ggcctggcat tctgattgtc gggtcgcttg gttgcgacgg agtggttggt gcgtgcaggc
     1741 gcccgagccg ccgagccgat gggattgatc gccaccggat cgtcgccgcc gctgccggc
//
LOCUS       DASRPQ010001814         1024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2119289, whole genome shotgun sequence.
ACCESSION   DASRPQ010001814 DASRPQ010000000
VERSION     DASRPQ010001814.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2119289"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..908)
                     /locus_tag="VFD73_20590"
     CDS             complement(<1..908)
                     /locus_tag="VFD73_20590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="choice-of-anchor Q domain-containing protein"
                     /protein_id="HZI76369.1"
                     /translation="MNTTVTSNSAPSGGGGGIANYDRSVTLRKSAILQNSGDGIFNRG
                     GDLDFRNSGVSNNSGRGITQRWGHAALDHVRIAGNTGGGTSQYYSTTMLTNSTVALNS
                     AHDGGGIENLVGSNYSIVNSTIVSNSAVDRGGGIRSTSGDPFGRVSAHVTLINSTVSG
                     NSAAIGGGIENSDDIFGAHVDVTNSTIVGNSASQAGGGVHNTNAPADADGSNSIVLRN
                     SLVARNTAPTAPDAHEAFATFSLIGDGTGSGIPNGSGNQVGTHNTPIDPRIGALADNG
                     GPTRTRALLAGSPAIDAASATDCPAT"
BASE COUNT          168 a          305 c          329 g          222 t
ORIGIN      
        1 tcggtcgccg ggcaatccgt ggccgatgca gcatcgatag ctgggctccc cgccagcagc
       61 gcgcgggtcc tggtgggtcc gccgttatcg gccagggcac cgatcctggg atcaatcggc
      121 gtgttgtggg tgccgacctg gttgccgctc ccgttcggga tgccgctgcc ggtgccgtcg
      181 ccgatgaggc tgaaggtggc gaacgcctca tgcgcatcgg gtgcggtggg cgcggtgttc
      241 cgtgcaacga gactgttcct aagaacgatg gagttggagc cgtccgcatc agcgggcgcg
      301 tttgtattgt ggacaccccc acccgcttgg ctggccgagt tccctacgat tgtgctgttg
      361 gtcacatcga catgagcccc gaaaatatca tccgaattct caatgccccc accgatcgcg
      421 gcagagttcc ccgagacggt gctgttgatc agcgtgacgt gagccgagac ccgaccgaag
      481 ggatcgcccg aggtactgcg tatgccgccg cctcgatcca cggccgagtt gctgacgatc
      541 gtgctgttca caatgctgta gttacttccc accaggtttt cgatccctcc accgtcatgg
      601 gccgagttga gggcgacggt gctgttggtg agcattgtgg tgctgtagta ctggctagtt
      661 ccacccccgg tgttgcccgc gattctaacg tggtcgagag cagcgtggcc ccacctctga
      721 gtgatgccgc gacccgagtt gttgctgaca ccactgttgc ggaagtctag atctccgccc
      781 cggttgaaga tcccgtcgcc agagttttgc aggatggcac tctttcggag tgtgacagac
      841 cgatcgtaat tcgcgatgcc accgccaccg ccgctgggcg ctgagttgct cgtgacagta
      901 gtgttcaaca aggtgagtgg accatgattg tcgatgccac caccatgcag cgcggctgcg
      961 ttgccggtca ccgtgcagtg agtcagggtc agtgtgccga agttgatgat cccggcgcca
     1021 tgat
//
LOCUS       DASRPQ010001815         1663 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3975591, whole genome shotgun sequence.
ACCESSION   DASRPQ010001815 DASRPQ010000000
VERSION     DASRPQ010001815.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1663
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3975591"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1371
                     /locus_tag="VFD73_20595"
     CDS             <1..1371
                     /locus_tag="VFD73_20595"
                     /inference="COORDINATES: protein motif:HMM:NF005560.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HZI76370.1"
                     /translation="VRELAMAESGARVAIVGGGLLGMTLAHRLRSQGFQTTIFEAAPQ
                     PGGLASSQRLGGAEWDRFYHVILLSDRDLLELLNELDLGGRLHWGYTRSGFYTDGRFH
                     SLSSSLDFLTFPPLSLWEKARLAATILRASRIQDPLPLESETAASWLSRLSGRRTYER
                     LWRPLLRSKLGENADRASASFIWAIIARMYAARRSGLKREMFGYVDGGYATILPRFRE
                     RLANGGVEFVCGQRVARVSSSSAGAAVQLADGSVLEFDAAILTVACPQILNLCPDLNE
                     TEQRRLRSVVYQGIVCPSLLLRRPLRSYYVTNITDEWVPYTAVIEMTALVDRERFGGH
                     TLVYLPRYLSQSSPMWQQSDGEIVGSFTQALLRMYPELRESDVSAWQVGRAREVLAIS
                     TLNYSRDSLPPSRTSLDNVFIANSAQIASGTLNVNETVGLANRKAKELGPLLRRARPS
                     EVEAPV"
     gene            1368..>1663
                     /locus_tag="VFD73_20600"
     CDS             1368..>1663
                     /locus_tag="VFD73_20600"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HZI76371.1"
                     /translation="MSHDDRPLASISLDLDDLWTYLRIHGDPRWVSRPSYLQRVVPLA
                     LEALDRAGVKLTFFVVGWDAANPANAPLLRRIIEHGHEIGNHSFEHEPWLHRYSR"
BASE COUNT          279 a          528 c          523 g          333 t
ORIGIN      
        1 gtaagggaac tggcaatggc tgagtccggc gcaagagtcg cgatcgtcgg cgggggtctc
       61 ttggggatga ccctcgccca cagactgcgc agccagggat tccagaccac catcttcgag
      121 gctgcaccac aacccggcgg cctggcctcc agtcagcggc tagggggagc cgagtgggat
      181 cgcttttacc acgtcatcct cctatcggac cgcgatctgc tcgagctcct gaatgagctg
      241 gacctgggcg gacgccttca ctggggctat acccgttcgg gcttctacac cgacgggcgc
      301 ttccactcgc tttcgagcag tctggacttt ctcaccttcc ccccgctgtc tctttgggag
      361 aaggcccggc tggccgcgac cattctccga gcttcgcgga ttcaggaccc actgcccctc
      421 gagagtgaga ctgccgcaag ctggttgtct cggctgtcgg gccggcgcac ctatgagcgg
      481 ctctggcgtc ccctgcttcg aagcaagctg ggggagaatg ccgatcgggc gagcgcctcc
      541 ttcatttggg caattatcgc gcggatgtat gccgcccggc ggtccggcct gaagcgagaa
      601 atgttcggct atgtggatgg cggctacgct accattctgc cgcgctttcg agaaagactg
      661 gcgaatggcg gcgtggagtt cgtctgcggg cagcgagtgg ctcgagtgag ttcgtcctct
      721 gccggtgccg ctgtacagct ggctgatgga agcgtactcg aattcgatgc ggcgatcttg
      781 accgtggcct gcccccagat cctgaacttg tgccccgatt tgaacgagac tgagcagcgc
      841 agactccgca gtgtggtata ccaagggatc gtgtgccctt ccctgctgct gcggcgcccg
      901 ctccggtcct attacgtcac caacatcacc gatgagtggg tgccgtacac ggcggtgatc
      961 gaaatgacag cgctggtcga ccgcgagcgg ttcggcggtc acacgctggt ctacttgccg
     1021 cgctatctca gccagagcag tcccatgtgg cagcagtcgg acggcgaaat cgtcggcagt
     1081 ttcactcagg cgctgctccg gatgtatccc gagcttcgtg agtcggatgt ctcagcctgg
     1141 caggtaggcc gggcccgtga ggtgctggcc atttcgaccc tcaactactc acgtgattcg
     1201 ctgccgccca gtcgtacctc gctggacaat gtgttcatcg ccaacagcgc gcagatcgcc
     1261 tcggggacgc tcaacgtgaa cgagacggtg ggtctggcga atcgaaaggc caaagaattg
     1321 ggccccctgc tccgccgcgc tcgtccctcc gaggtcgagg caccggtatg agccacgacg
     1381 accgaccact tgccagcatc tcgctggacc tggacgatct ctggacctac ctccggatcc
     1441 atggtgaccc acgctgggtg tcgcgcccga gctatttgca gcgcgtcgtt cccctggcct
     1501 tggaggcatt ggaccgggcc ggcgtgaagc tcaccttctt cgtggtgggc tgggatgcgg
     1561 ccaacccagc caatgcgccg ctgttgcggc gcattatcga gcatggccac gaaatcggga
     1621 atcactcgtt tgagcacgag ccatggctgc accgctacag ccg
//
LOCUS       DASRPQ010001816         1678 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4605700, whole genome shotgun sequence.
ACCESSION   DASRPQ010001816 DASRPQ010000000
VERSION     DASRPQ010001816.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4605700"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..817
                     /gene="tsaD"
                     /locus_tag="VFD73_20605"
     CDS             <1..817
                     /gene="tsaD"
                     /locus_tag="VFD73_20605"
                     /inference="COORDINATES: protein motif:HMM:TIGR00329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HZI76372.1"
                     /translation="GPGLVGALLVGVMYAKTLAFSLDRPLIGINHLEGHLFAPTLEDT
                     TLEPPFIGLLVSGGHTMLLDVPAWGSYRLLGQTLDDAAGEAFDKVATLLGLGYPGGAA
                     IEKLAREGRPGHFRFPSPMLQELERGGPNQYAFSFSGLKTAVLRAVRGNGPQPESSVP
                     KADIARAFQDAAIEVLVAKTAHAVEASGYGVAVVGGGVACNRALITALRERLAGRARV
                     SVASPRLNTDNAAMIAAAGAWRLAAGERSGWDLEARDDLPLPGLAPDLSGSRS"
     gene            814..1662
                     /locus_tag="VFD73_20610"
     CDS             814..1662
                     /locus_tag="VFD73_20610"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: protein motif:HMM:NF013915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HZI76373.1"
                     /translation="MTIYPLIFHLGPLEVTGYGLMLMVAFLMGGWLIARQLREAQLRE
                     DYAADIVAAAVIGGIIGAKLWYVALTRDPGALLSRGGLVWYGGFIGGALAVIFNGWRL
                     GVPLRWTMQLAAPALAAAYALGRVGCFLVNDDYGRPTNLPWAVKFPQGLPPSTAGNLH
                     QLFGVPVPAGTDPSSVLAVHPTQLYEVAAMLLAFAILWSLRKRGHPIGWLFGVYLILA
                     GVERFLVEIVRAKDDRFLGPFTLAQLTSVILVGIGILLIALWRTGPSPVPRSYLETGR
                     KSSVSS"
BASE COUNT          260 a          512 c          551 g          355 t
ORIGIN      
        1 gggcccgggc ctggtcggtg ccctgctggt gggcgtgatg tacgcgaaga ctctcgcgtt
       61 cagtctcgat cgtccgctga tcggcatcaa tcatctggag ggtcatctct tcgcaccgac
      121 gctcgaggac accaccctcg agcctccgtt catcggtctc ctggtgagcg gcggtcatac
      181 gatgcttctc gatgtgcccg cctgggggag ctatcgcctg ctaggacaga ccctcgatga
      241 cgccgccggt gaggcatttg acaaggtggc caccctgctc ggactggggt atccaggcgg
      301 cgcggcaata gagaagctgg ctcgcgaggg acgtcccgga catttccgct ttccctcgcc
      361 gatgctgcag gaactcgagc gcggcggtcc gaatcagtac gcgttttcgt tcagtggcct
      421 caagacggca gtcttgcgcg cagtccgggg aaacggaccg caacccgagt cttcggttcc
      481 caaggccgac atcgcacgtg ccttccagga tgcggcgatc gaggtactgg tggcgaaaac
      541 ggcgcacgcg gtggaggcat cggggtacgg cgtggccgtg gtgggtggtg gggtcgcttg
      601 caaccgcgct cttatcaccg ctctccggga acgcctggcg ggacgggcac gggtcagcgt
      661 agcttcacct cgtttgaaca ccgacaacgc ggccatgatc gccgctgcag gtgcctggcg
      721 acttgccgca ggcgagcgaa gcggatggga tctcgaggct cgtgacgatc tcccgctgcc
      781 tggcctggcc ccagacctgt ctggatcacg ctcatgacga tttatccgtt gatcttccac
      841 ctcggaccgc tcgaggtcac cggctacggg ctgatgctca tggtggcctt tctcatgggc
      901 ggctggctaa ttgcccgcca gctacgggaa gcgcaactgc gggaggacta cgccgctgat
      961 atcgtcgccg cagccgtcat cgggggtatc atcggcgcaa agctctggta cgtcgccttg
     1021 actcgggatc ccggtgcgct cctgtcccgg ggtggcctgg tgtggtatgg cggattcatc
     1081 ggaggagcgc tggcagtcat cttcaatggc tggcgcctgg gcgttccgct gcgctggaca
     1141 atgcagctgg cggctcccgc attggctgcg gcctacgccc tgggacgggt tggctgcttc
     1201 ctggtgaatg acgactacgg gcgcccgacc aatctgccgt gggcggtaaa gttccctcag
     1261 gggctaccac cgtcgacagc tggaaatctc caccagcttt tcggagttcc ggttcctgcg
     1321 ggcaccgatc cgtcatcggt cttggcagtc caccccaccc agctgtatga ggtggcggcc
     1381 atgttgctgg cctttgccat tctgtggtca ctgcgcaaac gaggccatcc catcgggtgg
     1441 ctgttcggag tgtatctgat cttggctggg gtcgaacggt ttctggtgga gattgtccgg
     1501 gccaaggacg atcgatttct gggcccattc acgctggctc agctcactag tgtgattctc
     1561 gtgggtatcg gcatattgct catcgccctc tggcgcacgg gtccgtcgcc ggtcccgcgg
     1621 agctatctag aaaccggccg gaagtcatca gtgtcaagtt aatagacggc tgtctatc
//
LOCUS       DASRPQ010001817         1142 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2398995, whole genome shotgun sequence.
ACCESSION   DASRPQ010001817 DASRPQ010000000
VERSION     DASRPQ010001817.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2398995"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(241..>1142)
                     /gene="dnaA"
                     /locus_tag="VFD73_20615"
     CDS             complement(241..>1142)
                     /gene="dnaA"
                     /locus_tag="VFD73_20615"
                     /inference="COORDINATES: protein motif:HMM:NF010686.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HZI76374.1"
                     /translation="GLGKTHLLHAIGHYTQSLYQGVRVRYVSSEEFTNDFINMIRDGK
                     QDGFRRRYRDVDVLLVDDIQFLENKEGTQEEFFHTFNTLHNASKQIVISSDRAPKRLV
                     TLEDRLRSRFEWGLLTDVQPPELETRIAILRKKAVQEGLNAPPEALEYIASRISTNIR
                     ELEGALIRVTAFASLNRQSVDLQLAEIVLKDLIPEAQGPEITATAIMGQTASYFGMSI
                     DDLCGTSRSRVLVTARQIAMYLCRELTDLSLPKIAQQFGGRDHTTVMHAERKIRSLMA
                     ERRSIYNQVTELTNRIKQQARSG"
BASE COUNT          168 a          357 c          373 g          244 t
ORIGIN      
        1 tttctcccag cccagggtga ctttctgtgg ccacagggcc tgtgcgccga cagtggcccg
       61 ccgggggacg gctgtggacg gccgcccttt ctccactgga tgcctggtgg ttaccccccg
      121 gacttgcggc gttgtcctcg cactgtccca agtgtgtcca cagagatatc cacagcctgt
      181 gtgtaccgac tgttaccgat ggcgctgata cgtgtcggcg gatcctggct gcggcgtgcc
      241 tcatccggac cgcgcctgct gcttgatgcg gttggtgagc tccgtgacct ggttgtagat
      301 cgaccgtcgt tcggccatca gcgagcggat ctttcgttct gcatgcatga cagtggtgtg
      361 gtcgcggccg ccgaactgct gcgctatctt cggaagcgac aggtcggtga gttcccggca
      421 gagatacatg gcgatctgcc gcgcggtcac cagaacccgg gaacgcgatg tcccgcacag
      481 gtcgtcaatg gacatgccga agtaggacgc ggtttggccc atgatggccg tcgcggtgat
      541 ctccgggccc tgcgcttcgg ggatcaggtc cttgagcacg atctcggcca actggaggtc
      601 gactgactgc cgattgaggc tggcgaacgc ggttacccgg atgagcgcgc cctccagttc
      661 ccggatattg gtggagatgc ggctcgcgat gtactccagg gcctccggcg gtgcgttcag
      721 cccctcctga acggccttct tgcggaggat cgcgatgcgc gtctccagct ccggcggctg
      781 cacgtcggtg agcaggcccc actcgaacct gctgcggagc cggtcttcca gcgtcaccag
      841 ccgtttcggc gcgcggtcgc tggatatcac gatctgcttg ctggcgttgt gcagcgtgtt
      901 gaacgtgtgg aagaactcct cctgagtccc ttccttgttc tccaggaact ggatgtcgtc
      961 gacgagcagg acgtccacat cgcggtagcg gcggcggaac ccgtcctgct tcccatcgcg
     1021 gatcatgttg atgaagtcgt tggtgaactc ctccgagctg acgtagcgga cccgcacccc
     1081 ctgatacagg ctctgcgtgt agtgcccgat cgcgtgcagc aggtgggtct tgcccagccc
     1141 gg
//
LOCUS       DASRPQ010001818         1895 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2754843, whole genome shotgun sequence.
ACCESSION   DASRPQ010001818 DASRPQ010000000
VERSION     DASRPQ010001818.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1895
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2754843"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..489)
                     /locus_tag="VFD73_20620"
     CDS             complement(<1..489)
                     /locus_tag="VFD73_20620"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZI76375.1"
                     /translation="MRERLERLYCRSMIVVVVGAGINGLVAAHYLRRAGHTVTVLDRA
                     DRAGGACVSATATVDGLTQSYALGASVLGLMPDFIFRETGLADRLDTYVPSSAKRVYF
                     PTAGASAWIHRDPPRLDQEFKERWGETGDAAGFRADEARVVAFLQQGFRAAVPPDVDV
                     ARA"
     gene            complement(644..919)
                     /locus_tag="VFD73_20625"
     CDS             complement(644..919)
                     /locus_tag="VFD73_20625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76376.1"
                     /translation="MASYIALIERSNRKDLANVEVQVTITDLSPGRQAWSGEFMSRSV
                     DGILPNERLALTFDTGQKGAARVSETRFDSRTPDTTLVHFTGTGPLA"
     gene            complement(1012..1479)
                     /locus_tag="VFD73_20630"
     CDS             complement(1012..1479)
                     /locus_tag="VFD73_20630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76377.1"
                     /translation="MHRVLGIAALVALISSCGSAGDILGPDTPAVALTADNLTGRWAE
                     VALIHHKFGAQTGVIVDTVRVNSADQAIYQFNLDGPGIVRRVQPDPGQATYAIDGQSS
                     IHWNIDRFEGYGATLSETRLSLGDGLEIQYTFPGDNFPSPAQATHVYARVKAS"
     gene            complement(1653..>1895)
                     /locus_tag="VFD73_20635"
     CDS             complement(1653..>1895)
                     /locus_tag="VFD73_20635"
                     /inference="COORDINATES: protein motif:HMM:NF014676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF188 domain-containing protein"
                     /protein_id="HZI76378.1"
                     /translation="VTQDVPLAALLVPRGIAVLDPRGGEHTAETIGERLSVRDFMERA
                     RMAGVITGGPAPYDGRAKQAFAAALDRVLTRLCRPT"
BASE COUNT          340 a          613 c          605 g          337 t
ORIGIN      
        1 ggcgcgggca acgtcgacat caggcgggac ggcggcgcgg aagccctgct ggaggaaggc
       61 caccactcgg gcctcgtccg ctcggaaccc tgccgcatcg ccggtctcgc cccacctctc
      121 cttgaattcc tggtcgagcc ggggagggtc acggtgaatc caggcgctgg cgccggcggt
      181 cgggaagtag actcgcttgg cggaagacgg cacgtaggtg tcgagccggt cggcgagtcc
      241 cgtctcgcga aagatgaaat ccggcatcag cccgagcacc gaggcaccga gcgcgtagct
      301 ctgggtcagc ccgtcgacgg tagcggtggc gctgacacag gcgcctccgg ctcgatcggc
      361 ccggtcgaga acggtcacag tgtggccggc gcgccgcagg taatgagcgg ccaccagacc
      421 gttgatgccc gcgccgacaa cgacgacgat catggaccgg cagtataggc gttcgagccg
      481 ttcgcgcaac gggtcttact ctccagggaa accgatggcc gcgcccgctg gctaagaccg
      541 ttctgacgtg gtcgatgctt ggagatccat tgaggaggca gtctcggctg catgcgcggg
      601 ttaggccgtg cggcccaccg atctcacacc gaataacccg cgactacgcg agcgggccgg
      661 tgccagtgaa atgcaccagg gtcgtgtccg gagtccggct gtcaaaccgg gtctcgctca
      721 cccgcgcggc gcctttctgg cccgtatcaa aggtcagcgc gaggcgctcg ttggggagaa
      781 tgccgtctac actccgggac atgaactccc cgctccaagc ctgccgaccg gggctcaggt
      841 ccgtgatggt gacctgcacc tccacgttcg cgaggtcttt ccgattcgag cgctcgatga
      901 gagctatgta cgaggccata gtccgaccta ctttctggtt gtacgagaga aatgcgccgg
      961 catgggtgcg gtgaacacca gctctggaat ggtactccga cggcggcgcg gctacgaagc
     1021 cttcacgcgc gcgtatacgt gagtcgcctg cgccggagaa ggaaaattgt cacctggaaa
     1081 cgtgtattgt atctccaggc catcgcccag gcttaaccgc gtttcactca gggtagcccc
     1141 gtatccttca aacctgtcaa tgttccagtg gatcgagctc tggccgtcaa tggcgtacgt
     1201 ggcttggccg gggtcgggct gaacccgccg cacaattccc gggccgtcga gattgaactg
     1261 gtagatggct tggtccgccg agttgacgcg taccgtgtcc actataacgc cggtttgcgc
     1321 gccaaacttg tggtgaatga gcgccacttc agcccaacgt cccgtcagat tatcggcggt
     1381 cagagctacg gcgggcgtgt caggccccaa gatatccccg gcactcccgc agctgcttat
     1441 cagggccacc agagcagcga tcccaagcac tcgatgcatt cggttcctct ctggttgggc
     1501 gtccgcctaa cgagatgcaa atcagctgca ggccatcatc ctaacgccca cacaaacgtt
     1561 cgttcctctg gccgctcacc atcgctggtg ctcgagcggc gcccaacggc cttctgtcgg
     1621 caggatgcgc gggttaggcc ggcaagccgc tctcatgtcg gccggcaaag gcgcgtcagg
     1681 actcgatcga gggcagccgc aaacgcctgc ttggctcgtc cgtcgtaggg ggcggggcca
     1741 ccggtgatca cgcccgccat ccgggcccgc tccatgaaat ctcgcactga caaacgttcg
     1801 ccgatggtct cggccgtgtg ctccccccca cgaggatcca ggactgcgat gcctctgggc
     1861 accagtaggg cagctaaggg cacatcctgt gtgac
//
LOCUS       DASRPQ010001819         1081 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_220118, whole genome shotgun sequence.
ACCESSION   DASRPQ010001819 DASRPQ010000000
VERSION     DASRPQ010001819.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220118"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..456
                     /locus_tag="VFD73_20640"
     CDS             <1..456
                     /locus_tag="VFD73_20640"
                     /inference="COORDINATES: protein motif:HMM:NF014034.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76379.1"
                     /translation="QSVYMLLQQLAEGRCEVENQYSRVVPWDGNTVALRAVAEVMELR
                     PYFEWRGLGFISHSALQVREKYAAFDAERRFTLPGVRVADPKACQCGEVLKGVLKPWE
                     CKVFGTACTPEMPIGTCMVSSEGACAAYYNFGRFSRQRVREVSIESSRA"
     gene            453..>1081
                     /locus_tag="VFD73_20645"
     CDS             453..>1081
                     /locus_tag="VFD73_20645"
                     /inference="COORDINATES: protein motif:HMM:NF012795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase related protein"
                     /protein_id="HZI76380.1"
                     /translation="MTHQDTTQQQRAGWAEEAVTEHSVAGPNADAGYPTHAPGTEHTG
                     REQLVLERIERARRARPRVREKLITLAHGAGGKATQSLIEAIFLDAFRNPLLEPLEDA
                     AAVTLGDARLAFTTDSYVVSPLFFPGGNIGDLAVNGTVNDLAVSGARPAHLSAGFILE
                     EGFPVEDLRRIVTSMAEAAAAAGVSIVTGDTKVVQRGKADGCYINTAGVG"
BASE COUNT          187 a          332 c          378 g          184 t
ORIGIN      
        1 cagtcggtct acatgctgct gcagcagctg gctgagggcc gctgcgaagt ggagaaccag
       61 tattcccggg tggtgccatg ggatggaaac acggtggcgc tgcgggcggt ggccgaggtg
      121 atggagctgc gtccgtactt cgagtggcgc ggcctgggct tcatctccca ttccgcgctg
      181 caggtccggg aaaagtatgc ggcctttgac gccgagcggc gtttcacctt gcccggggtg
      241 cgagttgccg acccgaaggc ctgccaatgc ggcgaggtgc tcaagggtgt gctcaagccg
      301 tgggaatgca aggtgttcgg caccgcgtgc acacctgaga tgccgatcgg cacctgcatg
      361 gtgtcctcgg agggggcctg tgcggcgtac tacaacttcg gccggttcag ccgccagcgg
      421 gtccgcgaag tcagtattga aagcagcagg gcatgacgca tcaagacacc acccagcagc
      481 agcgagctgg ctgggcggag gaggcggtca ccgagcacag tgtcgccgga cccaacgccg
      541 acgcgggtta tccaacgcac gcacccggga ctgagcacac cggacgggag cagttggtgc
      601 tggaacgcat cgaacgcgcc cggcgagccc ggccccgggt ccgggagaag ctgatcactc
      661 ttgcgcatgg tgccggtggc aaggcgaccc agtcgctgat cgaggccatc ttcctggacg
      721 cattccgcaa tcccttgctg gagcccctgg aagacgccgc ggcagtgacg ctgggtgatg
      781 cccggctggc ctttacgacg gattcctacg tggtctcacc gttgtttttc ccgggtggga
      841 acattggtga cctcgcagtc aacggcaccg tcaacgacct ggctgtctcc ggagcgcgac
      901 cggcgcatct ttcggccggt ttcatcctgg aggaagggtt cccggtcgag gatctccgtc
      961 ggatcgtgac gtcgatggca gaagccgcgg ccgcagccgg cgtgtccatc gtcaccggcg
     1021 acaccaaagt cgtgcagcgc ggcaaagccg acggctgcta catcaacacg gccggggtcg
     1081 g
//
LOCUS       DASRPQ010001820         1276 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_838137, whole genome shotgun sequence.
ACCESSION   DASRPQ010001820 DASRPQ010000000
VERSION     DASRPQ010001820.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1276
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_838137"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..721)
                     /locus_tag="VFD73_20650"
     CDS             complement(<1..721)
                     /locus_tag="VFD73_20650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76381.1"
                     /translation="MPSSLDRSSHSLPSQRELEALAGQVDHLAPGDLQSLYAGLTRAA
                     QLRSEGDGLFWLRFVLTRDEADAEHSVKPFPLHLEYLVELWRVLDSRQCVVIAKSRQM
                     LVSWAIATYTVWWARHKPNQAIYWQSQQARDAVNMVCAPKGAPMGRCQFIEANLPSWM
                     RIPITPLEGRLVYPNGSFIQALPGGAGQIRGNVPSLYVGDEFAFQEEQKGVWTAVAPL
                     IQKGAKAFLISTPNGSMNQFAE"
     gene            complement(672..1106)
                     /locus_tag="VFD73_20655"
     CDS             complement(672..1106)
                     /locus_tag="VFD73_20655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI76382.1"
                     /translation="MARAVPLTREQLTQIETLFSAGVTQREIASRLGLHYNTVWQHVH
                     DPNFRIKLEDVRAATKRVHAVKIREHAEKLHDAIGGALDSNDLFKVKAGTGALKDMDQ
                     IQAVACGDEAQAGVPAAVAPVDLKVLIAQLAGSQQSQPSLPA"
BASE COUNT          206 a          405 c          440 g          225 t
ORIGIN      
        1 gctccgcgaa ctggttcatg ctcccgttcg gcgtgctgat gagaaacgcc ttggccccct
       61 tctggatcag cggagcgaca gcggtccaga cgcctttctg ctcttcctgg aaggcgaact
      121 cgtccccgac gtacagcgag gggacgttcc cgcggatctg gccggcgccg cctgggagcg
      181 cctggataaa gctgccgttc gggtagacca gccggccctc caggggggta atcgggattc
      241 gcatccagga cgggagattg gcctcgatga actggcagcg acccatcggg gcgcccttcg
      301 gggcacagac catgttcacc gcgtcccgcg cttgctggct ttgccagtag atcgcctggt
      361 tgggcttgtg gcgcgcccac cagacggtgt acgtcgcgat ggcccaggag acgagcatct
      421 ggcgggactt ggcgatgacg acgcactgac gactgtccag gacacgccag agttcgacga
      481 ggtactccag gtgcagcgga aagggcttaa cgctgtgctc ggcgtcggct tcatcccgcg
      541 tgagcacaaa gcgcagccag aagagcccgt ctccttccga tcgaagctga gcggctcggg
      601 tgaggccggc atagagagac tgcaggtctc ccggagccag gtgatcgacc tggccagcca
      661 gcgcctccag ctcacgctgg gagggaaggc tgtgactgct gcgatccagc gagctgggca
      721 atgagtacct tgagatcgac gggggcgacc gcggcaggga ccccggcctg ggcctcgtcc
      781 ccacaggcca cagcttggat ctggtccatg tccttcaggg ccccggtccc cgccttgacc
      841 ttgaagaggt cgttgctatc cagagccccc ccgatcgcgt catggagctt ctcggcatgc
      901 tcccggatct tcaccgcgtg gacccgcttg gtcgccgccc ggacatcctc cagcttgatg
      961 cggaagttcg ggtcgtggac gtgctgccag acggtgttgt agtgcaggcc caggcggctg
     1021 gcgatctcgc gctgggtcac cccggcggag aacagcgtct cgatctgggt cagttgctcc
     1081 ctggtgagcg gaacggcgcg ggccactacc ggcggactat ccttccagcg tcccgaggac
     1141 ggagaggagg ttctggcgga ggggttcctg gtgatccggg agatcggcac ccttgatccg
     1201 cagccgggtc tcgtagaacc catgctggga gacacagcgc tggagggcca ggcggttccg
     1261 gcggcgggct tcctcg
//
LOCUS       DASRPQ010001821         1874 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3028549, whole genome shotgun sequence.
ACCESSION   DASRPQ010001821 DASRPQ010000000
VERSION     DASRPQ010001821.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3028549"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(200..754)
                     /locus_tag="VFD73_20660"
     CDS             complement(200..754)
                     /locus_tag="VFD73_20660"
                     /inference="COORDINATES: protein motif:HMM:NF014732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /protein_id="HZI76383.1"
                     /translation="MGRFVLSARRRWAAIGAVAVLGLLAGAGYAAVSPPVLTSNALVV
                     LPASIHDTATQVVIAGSNPVLTAALRSVHPAVSLRTMRNSVEVKSLSPSVLSISAQGK
                     TAAQAEGTANAVANTYVAYVTSPRTAGTVQARLLSPAANASGASLPGHLLVTGGLGVL
                     LGLLIGAIAVIVFSRSDRRFQSGE"
     gene            complement(1081..1566)
                     /locus_tag="VFD73_20665"
     CDS             complement(1081..1566)
                     /locus_tag="VFD73_20665"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI76384.1"
                     /translation="MTTALKFRNLTASADDPVETWPFEGILAAVERGTLPDWRRLAKA
                     IQADPWGPVAQQVLEAVHLARPYGTTELLEGVVGRARKLAADSERCEVAAEVRRLVSD
                     SGLSRQDFADRIGTSRSRLSTYMSGKVVPSAALMVRMRRVTHDCKRVLGRMWHAESAR
                     S"
     gene            complement(1563..>1874)
                     /locus_tag="VFD73_20670"
     CDS             complement(1563..>1874)
                     /locus_tag="VFD73_20670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76385.1"
                     /translation="IKGYLIVRRNQVRDYLDVAALSDRYGIPHAAGVLRHIDDYYGDQ
                     RGAEAEGVATQLARQLAAPKPVDTRTIAQLGQYKGLDARWADWKSVTDVCRSVAVEMV
                     Q"
BASE COUNT          347 a          625 c          604 g          298 t
ORIGIN      
        1 gtattgcggg ccatcgacat tctgcgcagc gaaggtccag tcttcaccgt gccacggcgc
       61 cgcgcctacg tcagcacaga cgccaagtag cgggccgcag agcccattag cgaactctgg
      121 caacccgcta ctcagataga caggcccgac acccgggcgg gcacgatcga cttgccattc
      181 cgaagctccg tcagggcagc tactccccag actggaagcg acggtcgctg cggctgaata
      241 cgatcacggc gatggctccg atcagcaggc ccaacaagac gccaagccct cccgtcacga
      301 gcagatgacc gggcagtgac gccccggagg cgttcgccgc tggcgacagc agtcgcgcct
      361 gcaccgtccc ggcggtccgc ggggacgtga cgtaggcgac gtaggtattg gcgacggcgt
      421 tcgcggtgcc ctcggcctgg gcggcggtct taccctgggc gctgatcgac aggacgctgg
      481 gactcaggct cttaacctcg acgctgttgc gcatggttcg cagcgatacc gccgggtgaa
      541 cgctgcgcag cgcagccgtg aggacggggt tgctgcccgc gatcacgacc tgggtcgccg
      601 tgtcgtgaat ggaggccggt agcacgacga gcgcgttgct ggtgagcacc ggcgggctca
      661 ccgcggcgta cccggcacct gcgagcaggc ccagcacggc gactgcgccg atagcagccc
      721 agcgccgccg cgcgctcagc acgaacctcc ccatccgggc ctccgctcca atccccggcg
      781 tactgcgcgt cagcgtatcg aatcagcagc tgacagaccg ctgtgtcggc cagatgacag
      841 accgccacgt cgtgatcggg caggctgata ccgggcaatc aggccagcat gctaatgagg
      901 agagagcatg acaagaacgc atggcaccac caggcatgca atggccgagc agcggggcct
      961 ccagagccgg ccagccagcg ccgctgagcg ggcgcagcgc atatttcacg agctgcacgg
     1021 cgacgggcgt cacgctctgt gcggtatctg cgatgcctgg cgctgctgag ttgccaaggg
     1081 tcaagatctc gcagattcgg cgtgccacat ccgtcccaga acacgcttgc aatcgtgcgt
     1141 tacccgcctc atcctcacca tcagggccgc cgacggcacg acctttcctg acatgtaggt
     1201 cgatagacga gatcgggaag tgcctatccg gtcagcgaag tcttgccggg acaggccgga
     1261 gtcactgaca agccttcgca cctcggcggc cacctcgcag cgctcggaat cagcggcaag
     1321 cttgcgggcg cgcccgacca ctccttccag tagttcggtg gtgccataag gccgggcaag
     1381 gtggaccgcc tcgagaactt gctgggccac tgggccccac ggatcggcct ggatggcctt
     1441 cgccaagcgg cgccagtcgg gcagggtgcc ccgctcgaca gcagcaagga ttccctcgaa
     1501 tggccatgtc tccaccgggt catccgccga ggcggtgagg ttgcggaact tgagggcggt
     1561 agtcattgga ccatctccac tgctaccgac cggcaaacat cggtcacgct cttccagtcg
     1621 gcccagcggg cgtcaaggcc cttgtactgg ccaagctgcg cgatcgtccg agtatccact
     1681 ggcttgggag ctgccagttg acgggcgagt tgggtcgcga caccttccgc ttcggcacct
     1741 cgctggtcac cgtaatagtc atcgatatga cggagcacac ctgcggcgtg aggaatcccg
     1801 taacggtcgg atagagcagc cacgtcgagg tagtcccgca cctgattacg ccggacaatc
     1861 aggtagccct tgat
//
LOCUS       DASRPQ010001822         1182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3684848, whole genome shotgun sequence.
ACCESSION   DASRPQ010001822 DASRPQ010000000
VERSION     DASRPQ010001822.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3684848"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="VFD73_20675"
     CDS             <1..264
                     /locus_tag="VFD73_20675"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HZI76386.1"
                     /translation="SYEPTTHWTVAEAEQPFRQLHTSEMPVVSGVRSELTITPSGEGV
                     TVRVHWTGRPKGLLGKLMRGMMQKRITESWERSLERLENAAQQ"
     gene            550..>1182
                     /locus_tag="VFD73_20680"
     CDS             550..>1182
                     /locus_tag="VFD73_20680"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HZI76387.1"
                     /translation="MPIFAARLGGFVLGSFVLAAFALPLAGCGGDTDPKPPGRPSLPH
                     TASAATPPGIHKIRHVVVIMQENRSFDSYFGTYPGADGIPGLAGNRGKLPCIPDPSLG
                     GCDKPYHDPKLVNGGGAHTAPAAVAAINGGRMNGFVAESEKGRGRGCGGFAGVCKASA
                     PSDVMGYHDAREIPNYWAYAKHFVLNDHMFASDASWSLPSHLYMVSEWSAR"
BASE COUNT          193 a          356 c          415 g          218 t
ORIGIN      
        1 tcctacgagc cgacaacgca ctggacggtg gcggaggccg agcagccctt tcgtcagctg
       61 cacacgagcg agatgccggt ggtcagcggc gtccgttcgg agctgacgat cacgccgagc
      121 ggcgaaggcg taaccgtccg cgtccactgg accgggaggc cgaaggggct gctcggcaag
      181 ctcatgcgcg ggatgatgca gaagcggatc accgagagct gggagcggtc gctcgagcga
      241 ctggagaacg ccgcgcagca gtagcgcagg gcgccgtgtc tgtcgcgtgt gtggctccct
      301 cgcgcggcgt ggatcggtgg cgcttcggcg agccgaaacc gcgctggttt cgactgagcc
      361 gccacgcacg ccgataaacg ctcggcaggt actggtgagg attctggcgg agcgggtcag
      421 cagcgcgccg ttttcggtag cgatgccaag aggatcggtg aaatatggac tggcgatgac
      481 caggcttaac tgattactcc tggcgccatt aggtttcact aagggggcta cagcagcttt
      541 gcccgcgtca tgccgatctt tgctgcacgg ctgggtggct ttgtgctggg cagttttgtg
      601 ctggccgcgt tcgcgctccc cctggcgggc tgcggcggag acactgatcc taagccgccg
      661 ggccgcccgt cgctgccgca taccgcctcc gccgccactc cgcccgggat tcacaagatc
      721 aggcacgtgg tggtgatcat gcaggagaac cgctcgtttg actcctattt cggcacgtac
      781 ccgggtgcgg acggtatccc tggactggcg ggcaaccggg gcaagctgcc gtgcatcccc
      841 gatccgagcc ttggcgggtg cgataagccc tatcacgatc ccaagctcgt caacgggggc
      901 ggggcccaca ctgcgcctgc ggcggtagct gcgattaacg gcggtcgtat gaacgggttt
      961 gtggccgagt ctgagaaggg ccggggtcgg ggttgcggcg ggtttgcggg ggtctgcaag
     1021 gcaagcgcgc cttccgacgt gatgggttac cacgacgcga gggagattcc caattactgg
     1081 gcctacgcca agcacttcgt gctcaatgac cacatgtttg cgtcagacgc gtcctggagc
     1141 ctgccctctc atctgtacat ggtctctgag tggtcggccc gc
//
LOCUS       DASRPQ010001823         1036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3976133, whole genome shotgun sequence.
ACCESSION   DASRPQ010001823 DASRPQ010000000
VERSION     DASRPQ010001823.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3976133"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..370
                     /locus_tag="VFD73_20685"
     CDS             <1..370
                     /locus_tag="VFD73_20685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HZI76388.1"
                     /translation="KATSLVLPEVKGKIDGVSLRVPTPDVSVVALTCVVQKATSAEEV
                     NAAFRDAAKSGPLQSVLAVSEEPLVSVDYIGSLQSSTVDAMSTNVVNGTLVNVTSWYD
                     NEMGYSARCVDLLRYIGNGR"
     gene            367..>1036
                     /gene="pgk"
                     /locus_tag="VFD73_20690"
     CDS             367..>1036
                     /gene="pgk"
                     /locus_tag="VFD73_20690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HZI76389.1"
                     /translation="MKRTLESLDKGSLEGRRALVRVDFNVPIKDGAVTDDTRIRAALP
                     TIKYLRDRGARLVLLSHLGRPKGGPDPKYSLKPVARALEKALGTPVTFLADPTAADAA
                     TTTKRLPRGSVALAENTRFYPGEETNDASLAERFAALGDLYVNDAFGSAHRAHASTEA
                     IARILKPAVSGFLMERELRYLGEALHQPKRPFVAVMGGAKISGKIDLVEALLPKVDEI
                     LLGGA"
BASE COUNT          194 a          329 c          329 g          184 t
ORIGIN      
        1 caaggccacc tcattggtgt tgccggaggt gaaaggcaag atcgacggcg tctccctccg
       61 ggtgcccacg cccgatgtgt cggtggtagc gctcacctgt gtggtgcaga aggctacttc
      121 agccgaagag gtcaatgccg cgttccgcga tgcggccaaa tccggaccac tgcagagtgt
      181 gctggcggtg agcgaggagc cgctggtctc ggtggactac attggctcgc tccagtccag
      241 cacggttgac gccatgtcca ccaatgtggt caacggtacg ctggtcaatg tcacttcctg
      301 gtacgacaac gaaatgggct attcggcgcg ctgcgtggac ctcctgcggt acatcggcaa
      361 cgggcggtga agcgcacgct cgaatcgctg gacaaaggct cgctcgaggg ccggcgagcg
      421 ctggtgcggg ttgatttcaa tgtccctatc aaggacgggg ccgtcaccga tgacacccgg
      481 atccgcgccg cacttcccac cattaagtac ctgcgagatc gaggcgcccg cctcgtgcta
      541 ctgtcgcatc tcgggcgacc aaaaggcggg cccgatccga agtactcttt gaagccggtc
      601 gcacgcgcgc tcgagaaagc gctcggcact ccggtcacgt tccttgccga tcccactgca
      661 gcagatgccg cgaccaccac caagcggctt ccccgcggca gcgtagctct cgcggaaaac
      721 acccggttct atcccgggga ggaaacaaac gacgcctcgc tcgcggagcg cttcgcggcg
      781 ctgggtgatc tctacgtcaa cgatgccttc gggtcggccc atcgggccca cgccagcacc
      841 gaagccattg cccggatcct gaagccggca gtctccggat ttctcatgga gcgggagctt
      901 cgctatctgg gggaggcact gcaccaaccc aagcggccct tcgtggcggt aatgggagga
      961 gcgaagatca gcggcaaaat cgacctggtc gaggcgctgc tgcccaaggt cgatgagatt
     1021 ctcctcggtg gtgcga
//
LOCUS       DASRPQ010001824         1049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4279750, whole genome shotgun sequence.
ACCESSION   DASRPQ010001824 DASRPQ010000000
VERSION     DASRPQ010001824.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4279750"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VFD73_20695"
     CDS             <1..180
                     /locus_tag="VFD73_20695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76390.1"
                     /translation="GSGLRVSEVVNLDKDQYTGKGFSRVQIKGGVIRDFGSCPCRLRI
                     NLPGSPVDSHGSKKA"
     gene            complement(306..>1049)
                     /locus_tag="VFD73_20700"
     CDS             complement(306..>1049)
                     /locus_tag="VFD73_20700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76391.1"
                     /translation="EDEAIERLSRSPQWVWVAMDPESKLLLTNDVGERTLAMAQRFVH
                     HVVHVLAPDCAPLFLTDGFREYRTALLTHYGEWRQPPRRQAKGPMPKRRWMPRPQLLY
                     AQVIKTLRRRRLVRVSHRVVFGTLEAVQQVLAVHGWQINTAFVERLNLDLRQHVAAVG
                     RRVATVCKGERGLRQQLALYHCYYNFCLPHRSLRLPLPQPEPTQGTGSARQWRPCTPA
                     MVAGLTDHVWTLREVLLLRVPPWSQPVGV"
BASE COUNT          190 a          351 c          329 g          179 t
ORIGIN      
        1 ggctcgggct tacgcgtctc ggaggtggtc aacctcgata aggaccaata caccggcaag
       61 ggatttagcc gcgtgcagat caaaggcggg gtgattcgtg attttgggtc gtgtccctgt
      121 aggctgcgga taaatctccc aggctcacct gtcgacagtc acgggagcaa aaaggcctag
      181 atgagagggc tctcatggcc tcccagcggc cctctccccc cggataacgc cctcgaagcc
      241 taccgtgtgg acacacgtcg ccaccttagg tcgcctctcc ctactgcttc ccccccctgc
      301 ttggcttaca cccctactgg ctgggaccac ggcggcacgc gaagcaggag cacctcgcgt
      361 agcgtccaga catggtcggt cagccctgcc accatcgcgg gtgtacaggg ccgccactgt
      421 ctggccgagc cggtcccctg ggtcggctcg ggctgaggca gagggagccg taagctgcgg
      481 tgaggcaagc agaagttgta gtagcaatgg tacagcgcga gttgctgccg caagccgcgc
      541 tcacccttgc acaccgtggc gacacgccgc cccacggcgg ccacatgctg gcggaggtcc
      601 aaattgaggc gctccacaaa cgcagtgttg atctgccagc cgtgcaccgc gagcacctgc
      661 tggaccgcct ccagcgtgcc gaacaccacg cggtgactga cccgcaccag acgacggcgt
      721 cgcagggtct tgatgacttg ggcgtagagg agctgtggcc gtggcatcca acgccgtttc
      781 ggcatgggcc ccttggcttg acgacgcggc ggctgcctcc actcgccata gtgggtgagc
      841 aaggccgttc ggtactcgcg aaacccatcc gtcaaaaaga gcggcgcaca gtcgggcgct
      901 agcacgtgca cgacgtggtg gacgaagcgc tgcgccatcg ccagggtccg ctccccaacg
      961 tcgttcgtca gcagcagttt gctctcgggg tccatggcca cccagaccca ctgcggtgag
     1021 cgcgacagac gctcgatcgc ctcgtcttc
//
LOCUS       DASRPQ010001825         2168 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2399426, whole genome shotgun sequence.
ACCESSION   DASRPQ010001825 DASRPQ010000000
VERSION     DASRPQ010001825.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2168
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2399426"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(128..448)
                     /locus_tag="VFD73_20705"
     CDS             complement(128..448)
                     /locus_tag="VFD73_20705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76392.1"
                     /translation="MSRAALLAALLLLAGCGPSPGEKRDLARRTIQSWTATLRKTSDA
                     LRHGTVPRVYARQVVQAAIESRTDESTAPEWATVPPQERTDLERAIRQLAAAVGQPDL
                     GSSR"
     gene            complement(445..747)
                     /locus_tag="VFD73_20710"
     CDS             complement(445..747)
                     /locus_tag="VFD73_20710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76393.1"
                     /translation="MSQRVRFEDLIGKVVHNSYGRPIGKIEDARMEPEGEDYLITHFL
                     IGPLGRLTRIRAFLGELPTLQAIGLGSERDLRPLPWQWFDLSDPERPVLTTENPAS"
     gene            complement(750..1106)
                     /locus_tag="VFD73_20715"
     CDS             complement(750..1106)
                     /locus_tag="VFD73_20715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76394.1"
                     /translation="MNVGQELLDQQVSDRNGQQMGKVDGVWIELPQGQAPRVASLVIG
                     GGTAARRLHPGFARWLVRWRHRWGPKNDQPLEVPWSKVLKIGVDVKVDLDAEQTPATA
                     WEHWIRQHIIGRIPGA"
     gene            complement(1110..>2168)
                     /locus_tag="VFD73_20720"
     CDS             complement(1110..>2168)
                     /locus_tag="VFD73_20720"
                     /inference="COORDINATES: protein motif:HMM:NF013715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HZI76395.1"
                     /translation="EMGGRLAAVSKHTLPDAMRERFGIRFFTVPLVAVVLVSFLVLAS
                     EIGGVALALQLATGIRFQWWAPVVAVAVWFLLWLHNFGLVEKGASLLGLVTLVFAVAA
                     LKLHTPLGQVADNLLPSLPKEEPANYWFTAVSIIGASVSPYLFYFYSAGAVEDEWDES
                     YLGVNRVISGLGMGFGGIVAIAVLACAAMVFHPRGIRVDQYEQIPLMLAQPLGRWGFI
                     LFVASLGIACFGAALEIALQIAYLIAQGFGWKWGENIKPGQAARFSLTYTLAALLAGL
                     VIFTGIDPLKLTIFSMALTALSLPITVVPLLIIMNDREYLGDNVNHWIANAAVLFVSV
                     LACIVALVAIPLQLMGGS"
BASE COUNT          420 a          713 c          681 g          354 t
ORIGIN      
        1 agcaggagcg cccagatcag ttgatatcgg aaggccgctc ctgcctgcgc cgccgtcgcg
       61 atggcaccga cctcgaggaa gcctccgatg ctggtgaaga tgcccagggc gatcttgatg
      121 agcttcttca tcgcgagctc ccgagatcgg gctgaccgac agcggcggcc agctgccgga
      181 tcgcgcgctc caggtcggtg cgctcctgcg ggggcaccgt cgcccactcg ggcgcggtcg
      241 attcgtcggt tctgctctca atagccgctt gcacgacctg ccgggcatac acccgcggca
      301 cggtaccgtg gcggagggcg tcgctggttt tccggagggt ggccgtccac gactgaatgg
      361 tgcggcgagc cagatcgcgt ttttcccccg gtgacggacc gcagcccgcc agcaggagca
      421 gagccgccag gagagcggcc ctgctcaaga ggcggggttc tctgtggtaa gcaccggccg
      481 ttcgggatcg ctcagatcga accactgcca gggaagcggc cgaaggtcgc gctcgctgcc
      541 caggccgatg gcctggagcg tcgggagctc acccagaaat gcgcgaatcc gagtgaggcg
      601 gccaagtggc ccgatgagga agtgggtaat gagatagtcc tctccctccg gttccatcct
      661 ggcatcttcg atcttgccga tgggccggcc gtaggagtta tgcacgactt tgccgatcag
      721 atcctcgaat ctcactcgct ggctcacatt cacgctcccg ggatgcgccc gatgatgtgt
      781 tgccggatcc agtgctccca ggccgtggcc ggagtctgct ccgcatccag atccaccttc
      841 acgtcgacac cgatcttgag caccttggac caggggacct cgagcggctg gtcgtttttt
      901 ggtccccagc ggtgccgcca gcgcaccagc catcgagcaa agccggggtg caaacgacgc
      961 gccgcggtac cgccaccgat gaccaggctc gcgactcgcg gcgcctggcc ttggggcagc
     1021 tcgatccaga cgccatcgac ctttcccatc tgctggccgt tgcggtcgct gacctgctga
     1081 tccagcagct cctgcccgac gttcatgcgt cagcttcctc ccatgagctg gagcgggatt
     1141 gccaccagcg cgacaataca ggcgagcacg ctcacgaaga gcaccgccgc attcgcgatc
     1201 cagtgattga cattgtcgcc cagatactcg cggtcgttca tgatgatgag aagaggcacc
     1261 accgtgatcg gtagagaaag ggcggtgagc gccatcgaga agatcgtgag cttgaggggg
     1321 tcgattccgg taaagatcac cagaccagcc aggagggcgg cgagggtgta agtcaggctg
     1381 aaacgggccg cctgacccgg cttgatattc tcgccccact tccagccgaa gccctgtgcg
     1441 atcagatacg caatttggag cgctatctcg agcgcggcac cgaagcacgc gatacccagc
     1501 gacgcgacga agaggatgaa tccccagcgt ccgagcggct gcgccagcat caggggaatc
     1561 tgctcgtact ggtcaacccg gatcccgcga gggtgaaaca ccatggccgc gcacgccagc
     1621 acggcgatcg ccacaattcc gccgaacccc atgcccagtc ctgagatcac ccggttcacg
     1681 ccgaggtagc tctcgtccca ttcatcctcg acggcgccgg cggaatagaa gtagaagagg
     1741 tacggactga ccgaggcgcc gataatgctc accgcggtga accagtagtt ggccggctcc
     1801 tctttgggca gactcggaag caggttgtcg gccacctgcc ccaacggcgt gtgcagcttg
     1861 agcgctgcaa ccgcgaagac cagggtgacg agtccaagga gcgacgcccc cttctccacc
     1921 agcccgaagt tgtggagcca gagcaggaac cacactgcca cagcaaccac cggtgcccac
     1981 cattgaaagc ggatgccggt cgcaagctgc aaggcgagcg caacgccgcc gatctccgat
     2041 gcgagcacca gaaacgagac cagtaccacc gccaccagcg gcacggtaaa gaagcggatc
     2101 ccgaagcgct ctcgcatcgc gtccggcagg gtgtgtttgc tgacggcagc caagcggcct
     2161 cccatctc
//
LOCUS       DASRPQ010001826         1224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2120331, whole genome shotgun sequence.
ACCESSION   DASRPQ010001826 DASRPQ010000000
VERSION     DASRPQ010001826.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2120331"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..270
                     /locus_tag="VFD73_20725"
     CDS             <1..270
                     /locus_tag="VFD73_20725"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HZI76396.1"
                     /translation="KALGATRVNILMQFLIEALTLCLLGGILGILLGIATAIVLSKVM
                     QWNTLISPMAVAIAFLFSAAVGLFFGLWPARRASRLDPIIALRYE"
     gene            286..>1224
                     /locus_tag="VFD73_20730"
     CDS             286..>1224
                     /locus_tag="VFD73_20730"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZI76397.1"
                     /translation="MPWDVVVVGGGVAGLTVAGRLAQAGKTVLLLEARSRLGGRVHTI
                     VGPSGEPIELGAEFVQGTPAELLELLHQARIQLRKMPERHLQAVSGQSKPLPDVEDLV
                     SRLLRYHSSGHDIPVAQLIQQHSSRFSRRQLDAITLYLEGFHGADLTRFGSAALAENQ
                     AAEAADAGHIARVAGGYRGIVSYLADQLNAAGVEVRTETIVSGIRWSPGSVQIHVRSP
                     GNPIQFHARQVILAVPICMLQGNTTEGSISLDPVPEGWSQALGLLEMGLAHRIDLCFE
                     SAWWTKLESSPTFVHGKGEAFPVWWTPSPGKATCLTG"
BASE COUNT          215 a          385 c          390 g          234 t
ORIGIN      
        1 aaggcgctgg gcgccactcg agtcaacatc ttgatgcagt tcctgatcga ggcattgacg
       61 ctgtgtctcc tgggcggcat cctcggcatc ctgctgggga tcgcgactgc gatcgtgctg
      121 tcgaaggtca tgcagtggaa cacgctgata tcaccgatgg cggtggccat cgcctttctc
      181 ttcagcgcgg cggtcggcct cttcttcggt ctgtggcccg cccgacgcgc atcgcggctc
      241 gatcccatca tcgcgctccg ctacgagtag atccaacagc tgctgatgcc ctgggacgtg
      301 gtggtggtcg ggggcggggt cgccgggctg acggtggcag ggcgcctggc tcaggcgggc
      361 aaaacggtac ttctgctgga ggcacgctcc cggctcggtg gccgggtgca caccatcgtg
      421 ggcccatcgg gggagccgat cgagctgggc gccgagttcg ttcagggcac tcctgccgag
      481 ctgctcgagc tcctccatca agcccgtatc caactccgga aaatgcccga gcgacacctc
      541 caagccgtca gcggccagag caagccactg cctgatgtgg aggatttggt cagtcgcctg
      601 ctccggtatc actcgagcgg acacgatatc cccgtcgctc agctgatcca gcagcacagc
      661 tcccgcttct ctcggcggca gctcgacgcg atcacgttgt atctcgaggg gtttcacgga
      721 gcagacttga cccggtttgg ctcggctgcg ctggcggaaa accaggcggc tgaagctgcc
      781 gacgccgggc acatcgcccg ggtcgccggc gggtatcgag ggatagtgtc gtatctcgcc
      841 gaccagctga acgcggcagg cgtggaagtc agaaccgaga ccatcgtgag tgggatcagg
      901 tggtctcccg gtagcgtgca aattcatgtg cgttctccag gaaatccgat ccaattccat
      961 gcgcgtcaag tcatactcgc cgtacccatt tgcatgctcc aaggcaacac aactgaaggc
     1021 agcatttcgc tcgatccggt gcccgaaggc tggagccagg cactcgggct cctggagatg
     1081 gggctcgccc atcggatcga tctctgcttc gagagcgcct ggtggaccaa actagaaagt
     1141 tccccaacgt tcgtgcatgg aaagggtgaa gcattcccgg tctggtggac cccctcaccg
     1201 ggaaaggcca cctgtctcac cggc
//
LOCUS       DASRPQ010001827         1130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_220860, whole genome shotgun sequence.
ACCESSION   DASRPQ010001827 DASRPQ010000000
VERSION     DASRPQ010001827.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220860"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..735)
                     /locus_tag="VFD73_20735"
     CDS             complement(<1..735)
                     /locus_tag="VFD73_20735"
                     /inference="COORDINATES: protein motif:HMM:NF040183.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI76398.1"
                     /translation="MPDQGTSVGGRRLAAELRRLRERTGLTGEEVCHQLGWSGSKLSR
                     IERHHIGVKQADLRKLLDLYGVDEGYREELLALASESRKKGLPQRAAARFPQVATYVY
                     AEAEAESVWNWEPQVVPGLLQTPAYARAVAELWPRMFPGPETETDRRVEARLLRQQVL
                     TRDPPLHLSVVMDESVLRRRFGDHTVMRQQLEHLTRAAELPNVEVRVFPLDRDHPPLP
                     IAAFSYMRFLRIHAVPRKDMVSVEHLE"
BASE COUNT          187 a          365 c          376 g          202 t
ORIGIN      
        1 ttccagatgc tccacggata ccatgtcttt gcgcggaacg gcgtgaatcc gcaggaaccg
       61 catgtaggag aaggctgcaa tcggcagtgg cgggtgatcc ctgtccagcg gaaataccct
      121 gacctcgaca ttcggcaatt cagcagcacg cgttaggtgc tccagttgct gccgcattac
      181 ggtatggtca ccgaatcggc gccgaagcac ggattcgtcc attaccacgg acaagtgaag
      241 gggcggatcc ctcgtgagga cctgctggcg cagcagcctg gcttcgaccc gccgatcggt
      301 ttcggtctca gggccgggaa acatacgtgg ccagagttcg gctactgccc gggcgtacgc
      361 gggcgtctgg agaagtccgg gaacaacctg cggctcccag ttccataccg actcggcctc
      421 agcctcggcg tatacgtaag ttgcgacttg agggaatctg gccgcggccc gctggggcag
      481 gcccttcttc cgtgattcgc tggcgagggc aaggagctct tcgcggtagc cctcgtccac
      541 tccgtagagg tccaggagct tgcgcaggtc ggcttgcttc acaccgatgt ggtgccgctc
      601 tatgcggctg agcttgcttc ccgaccagcc gagctggtgg catacttcct cgccggtgag
      661 gcccgtgcgc tcacgcaggc gccgtagttc cgccgcgagg cggcgaccgc caacggaagt
      721 gccctggtca ggcacgtgca cgaccttctc tcggtctcat cggtggcccc gggagggtgt
      781 gacttcattg cagcgtagtg cctggagtgg cctgcggtga agggccgaag ggctatctgc
      841 acagggatct gcaatgcagt ttgcactttt gcccattgca cgcaggtcac cgctgtcgtt
      901 caatggaagt gcggccagaa tcagggggcc acatgatcgc cagggggcaa cggcggagag
      961 tgccaccgcc ttttgccccg gagggcccga ggccccggcg gaccggcccc gtcctcgcca
     1021 ccgcgacgga gccgggatcg cgccagcgcg cgcggggccc gcccgcaaaa cccgatcgag
     1081 cccgcgatgg actcgcgtcg ctggggcggc ctgccattcc gtccccggac
//
LOCUS       DASRPQ010001828         1711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3685430, whole genome shotgun sequence.
ACCESSION   DASRPQ010001828 DASRPQ010000000
VERSION     DASRPQ010001828.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3685430"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1263)
                     /locus_tag="VFD73_20740"
     CDS             complement(<1..1263)
                     /locus_tag="VFD73_20740"
                     /inference="COORDINATES: protein motif:HMM:NF014428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HZI76399.1"
                     /translation="MIHKSAGFPVPCPLGRCLAVSLTVVLAVSGCGGEDAGCNGPFCQ
                     SPPVRPEASSIQPGQNDGQQGAPGRELPKPIDVMVTDSGGHPVSGVTVSFSVSGGGGT
                     LSSSTAQSDVNGLASVSWTLGSQLGSQSLRAEASNEDGKPLNNSPLQLSAMAVQPQPA
                     GLVLLTTLAETAQNGVVLVNQPVVQVFDADSQPLSQVEVVASVSSGGATLSGTATATS
                     DASGQATFTDLALVGPQGPQTLKFSVTTPALEITSSPIQLLAGTAASLTGVEPLSYQG
                     TVNSPVAPGPSVIAKDAAGNPVAGVSVTFASNRDASVSPETAVTNEQGLAQVSWTLGG
                     TANVQYSLTARVESSSLPAVRFSATAQAGAAGRLTVAVQPSSPTQSGTPFAQQPAIQV
                     ADQNGNPAAQAGVTVTATISSGPSGSLQY"
     gene            complement(1449..>1711)
                     /locus_tag="VFD73_20745"
     CDS             complement(1449..>1711)
                     /locus_tag="VFD73_20745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76400.1"
                     /translation="VVSVIGVYGGFIDKFPMGAVMNRSLTIRSGQCHVHRYMRPLLER
                     IRNGEIDPSFVITHRMPLDQAARGYEMFVNKVDGCEKVVLSA"
BASE COUNT          310 a          536 c          550 g          315 t
ORIGIN      
        1 gtactgcagg ctacctgagg gtcccgatga gatcgtggct gtcacggtca cgccagcctg
       61 agcggctggg ttgccgtttt ggtccgccac ctgaatcgcc ggctgctgcg cgaacggtgt
      121 gccgctctga gtgggagagg agggttgcac ggcgaccgtc agcctgccgg cggcgccggc
      181 ctgggccgtg gccgagaacc gaactgccgg aagtgaggag ctctcgaccc gcgctgtcag
      241 cgaatactgg acgttcgccg taccgcccaa ggtccaactc acctgcgcga gaccctgttc
      301 gttggtgacc gcggtttcgg gggagaccga cgcgtctcga ttggaggcaa aggtcaccga
      361 cacgcccgca acggggtttc cggcagcatc ttttgcgatc accgaaggtc cgggcgctac
      421 cggcgaattc accgtgccct ggtacgacag gggctctacg ccggtgagac tcgcggcagt
      481 gccggcgaga agttgaattg gtgacgaagt aatctcgagt gcaggtgtcg tgacactgaa
      541 cttcaaggtc tgaggtcctt gcggacccac aagggcaaga tcggtaaagg tggcttgccc
      601 gcttgcgtcc gacgtggctg ttgcggttcc ggagagggtc gcgccaccag agctgaccga
      661 tgccacgact tcgacctggg atagcggctg actgtcggcg tcgaacacct gcaccactgg
      721 ctggttgacc agcaccacac cgttctgagc ggtctcagcc agcgttgtca ggagcaccaa
      781 gccagccggc tgcggctgaa ccgccatggc ggagagctgg agcggagagt tgttcagcgg
      841 cttgccgtcc tcattgctag cttctgctct gaggctctgg ctccccagct ggctgcccag
      901 cgtccagctg acgctcgcca gtccattgac gtcggactgg gcggtggaac tggagagcgt
      961 acctccgccc ccacttaccg aaaagcttac ggtgacaccg gagaccgggt gcccgccgct
     1021 gtcggtgacc atcacatcga tcggcttcgg aagttcccga cctggggctc cttgctggcc
     1081 atcgttctgg ccgggttgaa tgctgctggc ttccggccgt accggcggac tctggcagaa
     1141 gggtccattg cagccggcgt cctcgccgcc gcagccggac actgcgagca ccacggtcag
     1201 cgacaccgcc aggcagcgtc ccagggggca tggcacagga aagcccgcag atttgtggat
     1261 catatctaaa gcttagtatc cctctcccgg agcaactgtc aagtttgtga cctgcatcac
     1321 gttgcgacgt cgtccactga gatccaaccg cggcaaaagt gggggcagcg attaagccac
     1381 cgtcaagtag ccaaagcgcc ccgccgaaat ctcggctggg gcgcttggaa cccggggaaa
     1441 ctgggtggtc aggcgctcag caccaccttc tcgcagccgt ccaccttgtt cacgaacatt
     1501 tcgtaccctc gggctgcctg atccaacggc atgcggtgag tgatcacgaa gctggggtcg
     1561 atctcgccgt tccggatccg ctcgaggagg ggccgcatgt agcggtggac gtgacactgt
     1621 cccgaccgga tcgttaacga ccggttcatg acggcaccca ttggaaactt gtcgatgaag
     1681 ccgccgtaca ctccgatcac ggaaaccact c
//
LOCUS       DASRPQ010001829         1199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1806588, whole genome shotgun sequence.
ACCESSION   DASRPQ010001829 DASRPQ010000000
VERSION     DASRPQ010001829.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1806588"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..291)
                     /locus_tag="VFD73_20750"
     CDS             complement(<1..291)
                     /locus_tag="VFD73_20750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76401.1"
                     /translation="MPGGVFGSWAGTGEVAAAPGINRLLEDRREPGPQHGPGSHGPLY
                     GLPVLNPYGIADERGLRCWRRLWQAEAMRCQQRSIALGDKAAMGEIRLQCGEL"
     gene            complement(520..>1199)
                     /locus_tag="VFD73_20755"
     CDS             complement(520..>1199)
                     /locus_tag="VFD73_20755"
                     /inference="COORDINATES: protein motif:HMM:NF025017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HZI76402.1"
                     /translation="DQISTPDLVLAHLLAHERQERLFVQGFTPVAREYLTGGASLLYD
                     RTYRSAMAVTESLHRQGKQWAIWGGNFSLRAEIWREVGGSDARQFRCYGHEDTDLGLR
                     LAALGVVFHYEPRACSFHMHECSCRSMARQAYEEARADAALAHKHHMELSSLKVTDAR
                     GKVDSAVLWAWRRGPRAMRAAGTAATAGLWIADRLPFESLQILAARVVRKLHKARGAC
                     AGPEQRY"
BASE COUNT          204 a          412 c          362 g          221 t
ORIGIN      
        1 caactcgcca cactggaggc gaatctcgcc catcgccgcc ttatcgccga gcgctatcga
       61 gcgctgctgg caccgcatgg cttccgcctg ccagagccgc cgccagcatc ggagcccgcg
      121 ttcgtccgct atcccgtatg ggttgaggac aggcaggccg tacagcgggc cgtgggagcc
      181 agggccgtgc tggggacctg gttcacgtcg gtcctcgagg aggcggttga tccccggtgc
      241 ggcggctacc tctccggtac ctgcccacga gccgaagacg ccgcccggca tctggtgaac
      301 ctgcccaccc acgcccgagt caatgagcgt gacgcagagg aaatcgccgc ccgcgtcatt
      361 tccgcacaac ggttaagccg aacgtccctg aacactggct tgctgagcgt ccccctgcga
      421 aacccggtcc gctcgtcgca ggcaggcagc ccgccccgtt cctcaatgat cagtcccgac
      481 aaccgatgct gtcccctggc gcgcttcgtg ctcctgctgt caataccgtt gctccggtcc
      541 agcgcaggct cctcttgctt tgtgcagctt cctgacgaca cgtgcggcca agatctgcag
      601 cgattcgaag ggcagccggt cggcaatcca gagcccggcc gtcgcggcgg tcccagcggc
      661 acgcattgcg cgtggcccgc gacgccatgc ccagagaact gcggaatcga ccttgccgcg
      721 agcatcagtt actttcagtg agctgagttc catatgatgc ttgtgggcca gcgcggcgtc
      781 ggcgcgagct tcttcgtatg cctgcctggc catggatcga caactgcact catgcatatg
      841 gaacgagcat gcccttggtt cgtaatggaa gaccacgccc agcgcggcga gcctgaggcc
      901 caagtcggtg tcctcgtggc cgtagcatcg gaactgccgc gcgtcggagc ccccaacctc
      961 gcgccagatc tcagctcgca gggagaagtt tcctccccat atcgcccatt gctttccctg
     1021 tcggtgcagg ctctcggtca cagccatggc tgaccgatac gtgcgatcgt ataggagcga
     1081 agctcctcct gtcaggtact ccctggctac cggagtgaat ccttgcacga agagccgctc
     1141 ctggcgctcg tgcgcaagga gatgagctag caccagatcc ggagtggaga tctggtcgt
//
LOCUS       DASRPQ010001830         1074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1806766, whole genome shotgun sequence.
ACCESSION   DASRPQ010001830 DASRPQ010000000
VERSION     DASRPQ010001830.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1806766"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..211)
                     /locus_tag="VFD73_20760"
     CDS             complement(<1..211)
                     /locus_tag="VFD73_20760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76403.1"
                     /translation="MAAGPGAGAGRVSGLIPEIRRPRRASKLTPAVVARIAELDGQGM
                     SRARIAAACGVPESSVRSALPPAGSG"
     gene            669..>1074
                     /locus_tag="VFD73_20765"
     CDS             669..>1074
                     /locus_tag="VFD73_20765"
                     /inference="COORDINATES: protein motif:HMM:NF021523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2252 family protein"
                     /protein_id="HZI76404.1"
                     /translation="MDADFKAMPGIVRSTDHYDSWLLALKPAFAHDLKQKLKVMAGGP
                     GDFLRATFYRWSERFPDVCLEAVSAPAVRAVGDVHVGNFGTWPGGGGVIRWGLNDFDE
                     AGWMPFTNDLVRLATSALLARNDLDAEVVGRTI"
BASE COUNT          191 a          336 c          346 g          201 t
ORIGIN      
        1 ccccggaacc ggccggaggc agcgcgctgc ggaccgatga ttccggcacc ccgcacgccg
       61 cggcgatccg ggcccggctc atcccctgcc cgtccagctc ggcgatccgc gccaccaccg
      121 caggggtcag cttcgacgcc cgccgaggcc ttctgatctc cgggatcagg ccggacaccc
      181 ggcccgctcc agcgcccggg cccgccgcca ccgggatcac cttgaacgcg gaggcgacct
      241 gctcctgggc ggcggccttc agtcaaaacg agcttcaata catcgcccgc gcctccatat
      301 ggcctccaca cggtctccac gcgatctcca cacagttcgg tctggctaga agacgaagca
      361 gtacgaagta acgcgaattc taagcgcgta ggcctgagcc accagcgact ccgggggtaa
      421 gccgtggcca caattaatta ttacagatat gattttattt tcctcagggc gtccggctcg
      481 aggaccagcg ggtgatttcg ttcggggggc ccgtgctcgg caccgcgggc cggaaagaat
      541 acttgttatt catcagatac tctccaggat atgggagtcg gttatgcctg gcctgcactg
      601 gttgagccag gatgagtagg tcagggttaa ccgcattgta gaaaacggca taaggggagg
      661 cagtcgcgat ggatgccgac tttaaggcaa tgcccgggat tgtccgcagt acggatcact
      721 atgattcttg gctcctcgcg ttgaagccag cgttcgctca tgatctgaaa caaaagctca
      781 aggtaatggc cggcgggcca ggggatttcc tgcgcgcgac gttctatcgc tggtccgagc
      841 gcttccctga tgtgtgcctg gaggcggttt ccgctcccgc cgtgcgggcg gtgggtgacg
      901 tgcacgtcgg caacttcggc acatggcccg gtggcggggg ggttatccgg tggggcctga
      961 acgacttcga tgaggccggc tggatgccgt tcacgaacga cctcgtgcgg ctggcgacga
     1021 gcgcgctcct ggctcggaac gacctcgatg ccgaggtggt gggccgcact atct
//
LOCUS       DASRPQ010001831         1021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1806891, whole genome shotgun sequence.
ACCESSION   DASRPQ010001831 DASRPQ010000000
VERSION     DASRPQ010001831.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1806891"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1015
                     /locus_tag="VFD73_20770"
     CDS             <1..1015
                     /locus_tag="VFD73_20770"
                     /inference="COORDINATES: protein motif:HMM:NF037746.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76405.1"
                     /translation="TGWRRDRHARKLRDELMPDMAREIPVDPLGLSREAVANWVFPYF
                     IRADILALRYQRRFRWLSLAIFALAAFAVAVVAVQAFLFSGEDWGAYAEALSLLILLL
                     ILWTNHRWRLRDRWISSRFLAERLRSSYFLALAGTGDQRGRPARLTYLSDSSEAWIER
                     ALTEVSARRPELETGSLPVDALRDYLKQHWIDSQISYQRKASRRQGKFDDWLIAGTGT
                     LFVLTLIAALAHSVGKSIPFLTFLHHIPERWTDVLLVVSITVPAIGAAFHGIGAQRQF
                     RRHSERYRIMANVLEKVHADMTDATTIDQVRDVAAATEQVMREENSDWFGVMRFHDME
                     LIT"
BASE COUNT          173 a          338 c          328 g          182 t
ORIGIN      
        1 cacaggctgg aggcgcgaca ggcatgcgcg caaactgcgc gacgagctga tgccggacat
       61 ggccagggag atacccgtcg acccgctcgg cctgtcccgg gaggcggtgg ccaactgggt
      121 attcccgtat ttcatccgcg cggacatcct ggcgctgcgc tatcagcgcc ggttccggtg
      181 gctcagcctg gctattttcg cgctggccgc cttcgccgtg gcggtggtgg ccgtgcaggc
      241 gtttctcttc agcggcgagg actggggggc ttacgccgag gctctcagcc tcctgatcct
      301 gctgctcatc ctctggacga accaccggtg gcgcctgcgc gaccggtgga tttccagtcg
      361 cttcctggcc gaacggctgc gctcgagcta tttcctcgcg ctggccggga cgggtgacca
      421 gaggggccgg ccggcacggc tcacgtatct ctcggattcg tccgaggcct ggatcgaacg
      481 ggcgctaacc gaagtgagcg cgcgccgccc ggaactggaa accggctccc tgcccgtcga
      541 cgcgttgcgc gactacctga agcagcactg gatcgacagc cagatctcct accagagaaa
      601 agccagccga cggcagggca agttcgatga ctggctcatc gcggggaccg gaacgctctt
      661 cgtgctgacg ctgatcgccg cgctcgcgca cagcgtcggg aagtccatcc ccttccttac
      721 cttcctccat cacataccgg aacgctggac agatgttctc ctcgtggtct ctatcacggt
      781 gcccgcgatt ggcgcggctt tccacggaat cggcgcccag cgccagttcc gccggcactc
      841 cgagcgctac cggataatgg ccaacgtgct ggaaaaggtg cacgccgata tgaccgacgc
      901 gaccacgatc gatcaggtcc gggacgtcgc cgccgctaca gagcaggtca tgagggagga
      961 gaacagcgac tggttcggcg tcatgcgatt ccacgacatg gagctgatca cgtgaccttg
     1021 a
//
LOCUS       DASRPQ010001832         4584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2400030, whole genome shotgun sequence.
ACCESSION   DASRPQ010001832 DASRPQ010000000
VERSION     DASRPQ010001832.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4584
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2400030"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..569)
                     /locus_tag="VFD73_20775"
     CDS             complement(<1..569)
                     /locus_tag="VFD73_20775"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI76406.1"
                     /translation="MHIAHQVLGSGPPDLVLVPGFVSHVEAAWDWPYLARFLYRLASF
                     GQLVLFDKRGTGLSDPMKRPPTLDERVDDIRAVMDAVGVDRAHLFGVSEGGALSIAFA
                     AHYPHRVESLILYGSYPRKVATADYPWGVSRETVARFLDRFDEAWASGAWWDIVNPDL
                     PPDPDTQRWWARYLRVGASPSMARDLMLM"
     gene            complement(838..1083)
                     /locus_tag="VFD73_20780"
     CDS             complement(838..1083)
                     /locus_tag="VFD73_20780"
                     /inference="COORDINATES: protein motif:HMM:NF013522.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HZI76407.1"
                     /translation="MPLINVKVIEGVFSSSQRREIVQKLTDAMVSIEGENMRGVTWCV
                     LEEVHSGDWAIGGNALTTQDVQALAAGTDTAVGVAVG"
     gene            complement(2164..2451)
                     /locus_tag="VFD73_20785"
     CDS             complement(2164..2451)
                     /locus_tag="VFD73_20785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76408.1"
                     /translation="MLVLIIGLMVMAGGGWYASHLFLAALPLARLRRVMRWTTVGSVG
                     IGVAILVAGLVASALTGYWLILLPTWSFGLLHINFAVRAWLRWARRSGTSP"
     gene            complement(2872..3522)
                     /locus_tag="VFD73_20790"
     CDS             complement(2872..3522)
                     /locus_tag="VFD73_20790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76409.1"
                     /translation="MELAEYIIFFALVVSTGAGIPGPGDAAMITAGTLAGEGRLNIGV
                     VVVTSLAGWMLGSLAGYAVGLRGGRALLDHPGRLQDRRRKLLVKGDAAFGRHTFTASV
                     TLPAYVSGIFRVRLVVFVLGALVSGSFFIALHEGLSYVFGEEVAKRIGDAGAKAVLGV
                     LIAVAAGLGFRAGWSRWRARREHLAGEDAGREGHASAVAPPGETGENASWLGSFSH"
     gene            complement(3856..4509)
                     /locus_tag="VFD73_20795"
     CDS             complement(3856..4509)
                     /locus_tag="VFD73_20795"
                     /inference="COORDINATES: protein motif:HMM:NF014025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HZI76410.1"
                     /translation="MKDLESLDAAFVIDTFLLLLIGIGPKIALVPFLEATAAMPEAVK
                     RRVLRKMLTTAAVVAVLLLVLGGLLTRLLHFSPGALGVASGIILLVIAVVMVLGHQNG
                     SGGDHPVEGRDPMQVAVYPLAVPYLLNPAGIVVLVTLSAEASSIGVLVVGVGVLVAVL
                     AFDIAVFRWAVQVSSKLDASRMLVTEKVFGFLLAALGVQLVLNGLSDVGVIHLTTGH"
BASE COUNT          899 a         1578 c         1360 g          747 t
ORIGIN      
        1 ttcatcaaca tcaggtcacg ggccatgctg gggctggcac ccacgcgtag gtagcgcgcc
       61 caccagcgct gagtgtctgg gtcaggcggc aggtctgggt tgacgatgtc ccaccatgct
      121 ccgctggccc acgcctcatc gaagcgatcg aggaaccggg cgacagtctc acgcgacacg
      181 ccccacgggt agtcggcggt cgcgaccttg cgcgggtagg acccataaag aatcagcgac
      241 tcaacccgat gcgggtagtg ggcggcaaac gcgatgctca acgcgccgcc ctcggacacc
      301 ccgaacaggt gcgctcgatc cacgcctacc gcgtccatca ccgcccggat gtcgtcgacc
      361 cgctcgtcca aggtgggtgg gcgtttcatc ggatcggaga gaccggtgcc gcgcttatcg
      421 aacaagacca gctgaccgaa cgatgcaagc cggtacagga accgggccag gtacggccag
      481 tcccaggccg cctcgacgtg cgacacaaac cccggcacca gcaccagatc cggcggccct
      541 gaaccaagaa cctggtgggc gatgtgcacc tgcccgctgc gcgcgtacct cgtggcagga
      601 cccaccccag ccaatctagc ggtcccgctc acgagaaacc accccacttg gggcgccgtc
      661 ccgcgcctgg ccgctcagct cagcaacagg caaaagatct ctttcctgta cggccagaag
      721 ccggttagtg ccttcatgcc atcccgactc tttgccgtac ccgtagagta aaagccgcct
      781 ggcggcggcc gcgggccctc aatggaggcc gcggccgccc atcttgcggt cgtcggttca
      841 gccgaccgcg acaccgaccg cagtgtcggt gccagccgcg agggcctgta cgtcctgggt
      901 ggtcaacgcg ttcccgccga tcgcccaatc gccgctatgc acctcttcca gcacgcacca
      961 ggtcaccccg cgcatgttct caccctcgat cgacaccatc gcatcggtga gcttctgcac
     1021 gatttcccgg cgctgcgagc tggagaaaac gccctcaatc accttcacat ttattagtgg
     1081 catcccgtat gccgcctttc cgttttgttc ctgcgctgcg ccggtccgcg cctactgccg
     1141 tcaaccggcc tggtcacatt cacgctagtg acactcctgg gccgctacat ccgtactaat
     1201 acggattcca gcaagttcag tatcgaccgg ccggcgcgaa gcggccgtgc catgcacgtg
     1261 ccatgcgcta gcgtcaccag cggccagcag cggtcagtcc cgtgcaaaag atgaccaccc
     1321 gtcagcgcaa cgtcagtgca gctcacggcg caggcacccc taccgatctg gccaagctgg
     1381 ttcggccccc acataacggc tagcctgcgt acctggccat caccatcttg cggctgaccg
     1441 ggaaccagca tcgcagccgc cctccgccac cacgcgcgcc gggccattaa ccccggtgac
     1501 gagcggtccc tcacggtcac tcgcggacac cccgccccgc aggtcaggcc gcatggcagg
     1561 cgcagacggt acagattccc aaactgatag cgcgggttcg attcccgtca cccgctccaa
     1621 gagagaacgc gcagctaggg cgttgttttc cggcgaagct ccgaagcggt catgatgcct
     1681 caccgttgtc tcgtgcccgt tgcgtgcccg attgggggcg ttcggcttcg actcgcctgc
     1741 tgatctcgtc agcgataatc cttcgaaccc ttggctggtt cgatacgctc accatgtaat
     1801 actaacacaa aatgattcct cggccgtatc tatcgtcgct tttggacgat gcgaccgatt
     1861 atcgaagcag catgctatgc tgccacccgc aaaacctaac ggcggtcagt cccgctcaca
     1921 gcaagcctca gcacctagtt ggatgattcg actgctcaaa gcgggttgca atctaggttc
     1981 cagttcgcct cggccgacct agttcatcca gatgcggcgg gcttaaatgg ccgtgccaca
     2041 tccgtgccgg aactggcaga aaactgtggt catcagcagt tactcacgga caccgcgaat
     2101 tgcctccgat ctgggcatgg ggctggttga cccgctacgt gaaacatact tctaagctga
     2161 cggtcacggc gaagtacctg acctccgtgc ccagcggagc caggcacgga cggcaaagtt
     2221 gatatgcagc agaccaaacg accaggtggg aaggagaata agccaatacc cggttagtgc
     2281 ggacgcaacg agtcccgcga cgagaattgc gacgccgata ccaaccgaac ccactgtcgt
     2341 ccagcgcatc acccgccgta gccgggctag gggaagtgcc gcgaggaaca ggtgcgaggc
     2401 ataccatccg ccgccggcca tcaccatcag cccgattatc agtacaagca ccgcccagac
     2461 cacgggatgc acgtaccctg cggcgcatgt cactaacgga gcccaacagg gcagtttgca
     2521 agtcattgtg cccgttacgt gcctgataga gagtcaggac cgatgtctga cggtcattca
     2581 cggataactg cgatggtggc tgacctgcga cttgccggtc agcgaggcat gacagtccag
     2641 ttcccaagct gatagtgcgg gttcgattcc cgtcacccgc tccactctga aagcgcaggt
     2701 cagagggctc actgcgagac ctggcctgac taaccgggtc atcagatacc gtccgggccg
     2761 ttaccgggcc agaagatcga ctgaccttct ggcccgtgtt cgctggacgc ctcggcggca
     2821 ccgcttaggc cggggtttcg cgctagtcag cctgcctcga tgctgaggtc gctaatgcga
     2881 gaagctgccc agccagctag cgttctctcc cgtctccccc ggcggtgcga cagccgaagc
     2941 atgtccttca cgcccggcgt cctcgccggc caggtgttct cgccgggcgc gccacctgga
     3001 ccacccggcc cggaagccca gccccgcggc gacggctatg agcacgccga gcaccgcctt
     3061 cgcgccggcg tctccgatgc gtttggcgac ctcctcgccg aagacgtatg acagcccttc
     3121 gtgcaaggcg atgaagaagg aaccggaaac cagcgcgcct agcacgaaca cgaccagccg
     3181 cacccggaag atcccggaca cgtaggcggg caacgtcacc gacgccgtga aggtgtgacg
     3241 gccgaaggcc gcatcgccct tgacgagcag cttccggcga cggtcctgca gccggcccgg
     3301 atggtcgagg agtgcgcgcc cgccgcgcag gccgaccgcg tacccagcca gcgaaccgag
     3361 catccagccc gcgagggacg tcacgactac gacgccgata ttgagtcggc cctcgcccgc
     3421 cagcgtgccc gccgtgatca tcgcggcgtc acccgggccc gggatccccg ctcccgtgct
     3481 aaccaccaga gcgaagaaga tgatgtactc ggccagctcc atggttacct cgtgggggtc
     3541 atggcacgct taccacggat cctcgccagc ctccgaagtg aaagaggcga cgacctttcc
     3601 tccggccagc gcacctccat ccccggcgag ccagatcagc atgatcttat cggcctgggt
     3661 cagcggcggc tggaccatca agcgggccca cagacggcaa ccgaggacca cgttgatctt
     3721 cgccgccggg ttgcggttcc atgccgtgcg ccgctgtcgc gggggaccgt tcaggcatgt
     3781 tggtccagcc tgaaccgatc cggatggcca ggccccgggc tgctacgacc cggatctgac
     3841 gggacggccg ggcgctcagt gaccggtagt caggtggatc acaccgacgt cggacaaccc
     3901 gttgagcacc agttgtaccc cgagcgctgc gagcaggaaa ccgaacacct tctcggtgac
     3961 gagcatccgg ctcgcgtcca gtttgctgct gacctgcact gcccagcgga agacggcgat
     4021 gtcgaacgcg agcaccgcga caagcacgcc gacaccgaca acgagcacgc cgatcgagct
     4081 ggcctctgcc gacaaggtga cgaggacgac gatcccggcc gggttgagca ggtagggcac
     4141 ggccagcggg taaacggcga cctgcatcgg gtcccggcct tcgacgggat ggtcaccacc
     4201 gcttccgttc tgatggccga gcaccatgac gactgcgata actagcagga tgatgccgct
     4261 agcgacgccc agcgcacccg gcgagaaatg cagcagcctg gtcagcaggc ctccaaggac
     4321 cagcaagagc acggcgacaa cggcggcggt ggtcagcatc ttgcgcaaaa cccggcgctt
     4381 gactgcctct ggcatggccg cggttgcctc cagaaacggc accagcgcga tcttgggacc
     4441 gatcccgatc agcaacagca ggaacgtatc gatgacaaat gcagcgtcca gcgattcgag
     4501 gtccttcatc gagctccgtc cagcatggtt ggaggcccgt accgggccat tgacaatcct
     4561 cgctgcgtgg gaaatgtgtg agat
//
LOCUS       DASRPQ010001833         2205 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2756596, whole genome shotgun sequence.
ACCESSION   DASRPQ010001833 DASRPQ010000000
VERSION     DASRPQ010001833.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2756596"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="VFD73_20800"
     CDS             complement(<1..182)
                     /locus_tag="VFD73_20800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76411.1"
                     /translation="MDAGARGMWDSGDPSDSKRRFGRTFGGAPIAYRSPPRPRWSLHS
                     RWEYAPRGDCFAGRPR"
     gene            350..1015
                     /locus_tag="VFD73_20805"
     CDS             350..1015
                     /locus_tag="VFD73_20805"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HZI76412.1"
                     /translation="MSKVFVNIGLSLDGYMAPEGMTMEHWDTPEYKNWGAKWGALMGW
                     ILSQQYFRTNLKLGPGGETGPINDMLRQTTERIGANIMGKRMFEQGERSWPEEAPFHT
                     PVYVLTHAKRDPWVRPGGTTFYFVNDGPERALELARKSAGGHDIRIAGGADVIQQYLN
                     LGVVEELDIALAPVLFGGGRRLFENLRAPGPKFRIDRVVAGPAATHLRYVRQSGGNLG
                     TSA"
     gene            1012..1536
                     /locus_tag="VFD73_20810"
     CDS             1012..1536
                     /locus_tag="VFD73_20810"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HZI76413.1"
                     /translation="MKLSVFVGTSLDGFIARVDGSFDFLHESGGSEPHGYEEFFASVD
                     ALLIGRKTFETVLKFDAWPYGSKPVFVLSTRTLAPSPPGAVVEHMSGPPAEVVATLAG
                     RNFNHIYIDGGITIQRFLEAGLIDRLVIARVPVLIGTGIPLFGPLQRDIRLRHVATRV
                     YASGLVQSEYAVAA"
     gene            1977..>2205
                     /locus_tag="VFD73_20815"
     CDS             1977..>2205
                     /locus_tag="VFD73_20815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76414.1"
                     /translation="MTNSSAWPAIAILLLAGCGEDVNCLQGIFAGVSVHAVSTQNSTP
                     LLGVRGVVSDGTYRDSLLEVGHGYYEGAPGRA"
BASE COUNT          411 a          651 c          718 g          425 t
ORIGIN      
        1 aagcgtggcc gtccggcgaa gcagtcaccg cgaggggcat attcccaacg ggagtggagc
       61 gaccagcggg gtcgaggcgg actccggtag gcaatcggtg ctccgccgaa ggtgcggccg
      121 aaccggcgtt tggagtcgga agggtccccg ctgtcccaca tgccccgagc accagcgtcc
      181 atccggtcca ccttcgatgt agtcccatgc tgactcactt ctcgtcgtac tatggcggtg
      241 tagcctgcag tcgctgatgt tatctccgat agactgccca ggacggcggt ccaaaggggc
      301 gggcaaatac tttaacaagg tacgaaggaa acagcacgag aggagaatct tgagcaaggt
      361 attcgtcaac attgggctca gcctcgatgg ctacatggca ccggaaggaa tgaccatgga
      421 gcattgggac acgcctgagt acaagaactg gggcgcgaag tggggcgcgc tgatgggttg
      481 gatcttgagc cagcaatact tccgcacgaa cctgaagctc ggaccggggg gagagaccgg
      541 ccccatcaat gacatgcttc gccagaccac cgagcgcatc ggcgccaaca tcatgggcaa
      601 gcgaatgttc gagcagggcg agcgctcctg gccggaggag gcgccgtttc acacaccggt
      661 ctacgttctg acccacgcga agcgcgaccc ctgggtgcgc ccgggtggga cgaccttcta
      721 cttcgtcaat gacgggccgg agcgtgcgct cgagctcgcg cggaaatctg cgggcggtca
      781 cgacattcgc attgcgggtg gagcggatgt gatccagcag tacctgaacc tgggtgtcgt
      841 ggaggagctt gacatcgcgc tggcgccagt gctgttcggc ggtgggcggc gtctgttcga
      901 gaacctccgc gcgcccgggc cgaagtttcg cattgaccgg gttgttgctg gtccagctgc
      961 cacgcacttg cgctatgtgc gtcagtcagg cggcaactta gggacctcgg catgaaatta
     1021 tcggtcttcg ttggcaccag tctagacgga tttatcgcgc gagtggatgg ctccttcgat
     1081 ttcctccatg aatccggcgg tagcgagccc cacggttacg aggagttctt tgcgtcggta
     1141 gatgcgctgc tcatcggccg gaaaacgttc gagacggtcc taaagttcga cgcatggcct
     1201 tacggctcga agccggtctt cgtactcagc actcgcacgc tcgctcccag tccgcctggt
     1261 gccgtagtgg agcacatgtc aggacccccg gcagaggtcg tcgccacgct tgcggggcgt
     1321 aacttcaacc atatttacat cgatggcggc atcacgatcc aacgctttct cgaggccggt
     1381 ctgatcgatc gcctcgtaat tgcgcgggtc cctgtgctca tcggaactgg aattccgctt
     1441 ttcggcccac ttcagcgtga catcaggctc aggcacgttg ccacgcgggt ttacgcgagc
     1501 gggctggtcc agagcgagta tgccgttgct gcctgacaag cgcatgctct ctcaccgagg
     1561 cgatgctcgg atgtttgaga ctggcgagcc gcacacgaga gtggagctgg tcgcagcgct
     1621 cgggcgcgtg cagcaggagg gaaacgccta cctgcgcacc ttgccaccca gcgtgttctt
     1681 tgcaccccaa ggaccggcat tgtcacccgc cgagcacgcg cgccatctcg tcaaatcgtt
     1741 gagcccgctg gtgtgggtac tccgcttgcc gcggcctgtc ctcggtctgc tgttcgggcg
     1801 ccatcgagag ccggggtcgg ggcgcaccgt aattaacgca ccacagtgtg cgctaaggtt
     1861 taccaccgca agctggggca agcctcaagt aaatggaacc gctggatatt gaggggctga
     1921 gaagtcgccg cagctgatgc ccgatccgtt aggtcgacag caaggggaga actggtatga
     1981 cgaactcatc tgcgtggccg gctatagcga tcctgctgct tgcgggctgc ggcgaagacg
     2041 taaactgtct ccaagggatt tttgccgggg tttcggtgca cgccgtgagt acgcagaaca
     2101 gcacaccgct cctcggcgtg cgcggcgtgg tgagtgatgg cacgtaccgc gactctctgc
     2161 tggaagtcgg ccacggctac tacgagggag ccccgggtcg tgccg
//
LOCUS       DASRPQ010001834         1117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3686414, whole genome shotgun sequence.
ACCESSION   DASRPQ010001834 DASRPQ010000000
VERSION     DASRPQ010001834.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3686414"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          225 a          379 c          330 g          183 t
ORIGIN      
        1 ccgggccctg tagctccatc gcatcggcaa ggcagcgtgc agactggggg tgaggccacc
       61 tggtgcggcc gcactccaga ttcctgatcg cgcggacgct caggccagaa cgcactgcca
      121 gctcctcctg tgagagccca gccgaacgac ggcagctgcc caagcgcacg ccaaacggcg
      181 cgtccccagc actcatcaaa tggccccttc aggtccccgg cctggatata aggccattcc
      241 gggcacccaa cggaactcta ctgagaaagt gccggtgaaa ctaccggtgc gccaggacac
      301 ctccgcgagt ctgaaccccg cacgggccag ggtcatggca gaaccgtctc ctggccgaca
      361 agatctgggc cctcggcgcc gtcaccctgc gccacgccag caacctccac cacatcgacc
      421 ccagccgcga ctaccagctc accggaaagg cgccagccca gaaacgagtg ccctgaccca
      481 gtgtgggttc acggtgtcct ctatgccttg agacatcaca aagtgaagta atggggattc
      541 gaacctgcgg tcaaactgcc ggtcaaactg ccggtcaaac tgcctggcat atagcgggac
      601 ccggtgatag gacaaaggat gcacgcgtgt ctcatccctg ctccatggag gtcctcaggg
      661 acggccgacc gcgcccggct gcggcaggcc accggtatcg gctcagttcg tgccgcgttt
      721 cggcgctgac gcaaggaggc gtaaagatga gacgaaacta caagatgacg gtccgccgca
      781 tttgtaccgc ggtcgcgcta gtcatggtca ctgcctgggg aatcccggca ctggcactgg
      841 caccggctgc gctcgccagc ccggccgtgg cgtccgccgc cacgcacggt acaccgccgc
      901 gcgtccaccc agatggcgcc ggggattgcg aagtggtcgt cgagaatagc ccaaacgatt
      961 atacagtcac cgctaaagta agatccggct gcctactggg ggcaacaacc gttccggggg
     1021 tcgcccccca tgtctcaata ggctttcaat tgtctgcctg cggtggtgtc ctcacgtggg
     1081 ccgggataga tcccattacc atgacattcg cgtgttt
//
LOCUS       DASRPQ010001835         1023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3686479, whole genome shotgun sequence.
ACCESSION   DASRPQ010001835 DASRPQ010000000
VERSION     DASRPQ010001835.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3686479"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..644)
                     /locus_tag="VFD73_20820"
     CDS             complement(<1..644)
                     /locus_tag="VFD73_20820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76415.1"
                     /translation="MDWTKKNFPVAAAGATPSHIAFDGANIWVTIPPLKVSRLSASNG
                     ALVNSFTLQGAGGIVFDGDNMWIATFPGTVIKLHASDGQSLCSASVPMSASGIAFDGA
                     NIWVASQSVNTVTKLQASDCTNLGSYNVGPGPSDIVSDGDNIWVIGNTGTLTKLQASN
                     GANLGNFSFPGGPVLGIAFDGNNVWITSAGGSSLLKLQPSDGQVLATYSLVNGGG"
     gene            complement(671..>1023)
                     /locus_tag="VFD73_20825"
     CDS             complement(671..>1023)
                     /locus_tag="VFD73_20825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76416.1"
                     /translation="RLDPRDPRARKAPTELLELPDLLGHKVLPGQKAMTELRVQQDHK
                     DQPARKVLMALLARQDLRAQRVLTELPAQPDHRAPQARKVRTELPEQPDHKDPLAQKG
                     RMDRPAQPDLRVLV"
BASE COUNT          186 a          324 c          303 g          210 t
ORIGIN      
        1 ccgccaccgt taacaagaga gtatgtggcc aggacctgac catcgctggg ctggagtttg
       61 aggagagaac taccaccggc actggtgatc cagacattgt tgccatcaaa agcgattccg
      121 agaacaggac caccgggaaa actgaaattg cccaggttcg cgccgttgct ggcctggagc
      181 ttggtaagag taccggtgtt gccgataacc cagatgttat cgccgtcaga aacgatgtcg
      241 ctcgggccag ggcctacgtt atagctgccc aggttcgtac aatcgctcgc ctgcagcttc
      301 gtcacagtgt tgacggactg actcgcaacc cagatattcg cgccatcgaa cgcaatacca
      361 ctggcactca taggtaccga ggcgctgcaa agactttgcc catcgctggc gtgcaatttg
      421 atcaccgtgc cgggaaaagt cgctatccac atattgtcgc cgtcgaacac gatccctccg
      481 gcgccttgga gcgtgaagga attcaccaac gctccattgc tggcactcag cctggagacc
      541 ttaagaggag ggatagtcac ccagatattg gcgccgtcga aggcgatgtg ggatggagtg
      601 gctcccgctg ccgccacagg aaagttcttc ttggtccagt ccatcagggc ggctcgcctc
      661 tctcgtagac ctacaccaat acccggaggt ccggctgggc cgggcgatcc atccgcccct
      721 tttgggccag tgggtccttg tggtccggtt gttccgggag ttccgtccgc acctttcggg
      781 cctgtggagc cctgtggtcc ggctgggccg gcagctccgt cagcaccctt tgggcccgca
      841 ggtcctgtcg cgccaggagc gccatcagca cctttcgcgc cggctggtcc ttgtggtcct
      901 gctgcacccg cagctccgtc atcgcctttt ggcccggcag gaccttgtga cccagcaggt
      961 ccggcagctc caggagctcc gtcggcgcct ttcgagcccg cgggtccctg gggtccaatc
     1021 gcg
//
LOCUS       DASRPQ010001836         1234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3686532, whole genome shotgun sequence.
ACCESSION   DASRPQ010001836 DASRPQ010000000
VERSION     DASRPQ010001836.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1234
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3686532"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1000)
                     /locus_tag="VFD73_20830"
     CDS             complement(<1..1000)
                     /locus_tag="VFD73_20830"
                     /inference="COORDINATES: protein motif:HMM:NF014732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /protein_id="HZI76417.1"
                     /translation="MTNAQSTTDLRQYWEIIRSRKFAIIIPTLLALGLAAAYLFVLQK
                     PQYTAQARVLVNSIVTPSTTTATAKGNTPNMNTEQAAANSGPVAVLARKSLGLSGSNG
                     ERLLSHLTVSASGTANVLQFQYTSPDPQLAARAANALAQAYITYRNSTALKPLTNAIR
                     ERQHTISALMAQLPHAGKVQRGVLVMELREDATQLAQFQADQQLVSAGTVITNAAPPS
                     SPSSPKVAKTLLIAGVIGLVFGVCLALIREAMDPRIKNPDALESRLRAPVLGVIPKFD
                     ARSPERSLATIADPRGPASEAYRMTAITLEHLAARDGQRVIMVVSPQDGGGASTTVA"
BASE COUNT          193 a          364 c          436 g          241 t
ORIGIN      
        1 tcgccaccgt ggtcgacgct cccccgccat cctggggcga cacgaccatt atcacgcgct
       61 ggccatcccg cgctgccagg tgttccaggg tgatggccgt catccggtag gcctcactgg
      121 cgggaccgcg ggggtcagcg atcgtcgcca gggacctctc cggcgatcgg gcgtcgaact
      181 tggggataac gcccagcacc ggcgccctca ggcggctctc cagcgcatcg gggttcttga
      241 tccgggggtc catcgcttcc ctgatcagcg cgaggcagac gccgaaaacc agccctatca
      301 ctccggcgat gagaagagtc ttggcgacct tgggcgagga aggggaggac gggggcgccg
      361 cgttcgtgat cacagttccc gccgagacca gctgctggtc ggcctggaac tgcgcgagct
      421 gggtcgcgtc ctcgcgcagc tccatcacca gcaccccccg ctggaccttt ccagcgtgtg
      481 ggagctgtgc cataagagcc gagatcgtgt gctgccgctc cctgatggcg ttggtgagag
      541 gcttcaaagc tgtgctgttc cggtaggtga tgtacgcctg ggcgagcgcg ttggcagccc
      601 gcgcggccag ctgcgggtcg ggggaggtgt actggaattg gaggacgttg gcggtgccgg
      661 aggcactgac cgtaagatgg ctcagcagcc gctcgccatt gctgccggaa agcccgagcg
      721 atttccgtgc caagaccgca acggggccag aattggccgc cgcctgttca gtgttcatgt
      781 tcggcgtgtt gcccttggcg gtggcggtgg tcgtggacgg ggtcactata gagttgacaa
      841 gcaccctggc ctgggccgtg tattgaggct tctgcaggac gaataggtat gctgctgcca
      901 gcccgagggc caggagggtg ggaatgatga tcgcgaactt ccgcgatcgg atgatctccc
      961 agtattggcg cagatcggta gtggattgtg cgttggtcat gttgtaccgc tccccgtgac
     1021 ctggtgggga agcagcctaa catccgcagg cgggctgtcc ccgtgctgtg atgaaccttg
     1081 ctcaatcttt actctgctca gaggcgggtt gcggtcccgg tgccgggctt gattcatgtg
     1141 ggggtatcct ctcggcgctt ccgcagtctg tcagccgcgg aggcggctag cagggtgagg
     1201 gcgaacggca ggtcgtggac cagatacctg ctga
//
LOCUS       DASRPQ010001837         1132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2400629, whole genome shotgun sequence.
ACCESSION   DASRPQ010001837 DASRPQ010000000
VERSION     DASRPQ010001837.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2400629"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(907..>1132)
                     /locus_tag="VFD73_20835"
     CDS             complement(907..>1132)
                     /locus_tag="VFD73_20835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76418.1"
                     /translation="DLPECQAIASVNDNFLKVAQDTLVNYLKTLLQKHEEPPHPSEKI
                     KIRGTATALIVPVPDELARALEDRWATTAD"
BASE COUNT          193 a          364 c          364 g          211 t
ORIGIN      
        1 ccaacacctt ctctggcgga ctgtgatccg cttacaacca gtgcttcacg cctccgtggt
       61 gcgagcacgc gcccgtatgg cgagcacttt cggaataggt gccgtcgtta cacaaggcgg
      121 tcgcgcccgc aggaccggcg ctgccgaccg gtgaagacgt ccccggcagg tcctgtctgg
      181 gggaggttgt caccggagcg gaggtcgcac tgtccgaagc cgagactgct accccgccat
      241 gacgcgagca ggcgccccgc cctgcgcgcg acgtggtacc atcctgacac gcgaccctgc
      301 cgctgctcgt ggtcccggca taccggaccg acggctctcg cgttgtagca gcagctctcg
      361 cagcgccgac gcctccatga tgggaacacg ccccgcggcc ggcactggcc gaggttccat
      421 ctcggcagct caccgtttcc ccggtcgagg cttcatcggc agcggccgtg ttttcttgtt
      481 gtgacgcgcg gctcgcgcga gtggagctcc ggcgggtgct cttggtcgca gttcctacgc
      541 caccatggtg ggaacaagcg ccccggccgg catcggctgt cgttccatcc ttgcagctca
      601 cggtagcggc cgccgccgct acaccgccgt ggtgcgagca ggcgccgcgg ccggtctggg
      661 tcgcggtagt tccatcctta caggttaccg tcgcttgggc agagagctgc gatggtaagg
      721 cgagagtcgt acagagtgcc gcggtcgcgg cgaagagcgt gaaacgagac atggtaaccc
      781 cccagctggc aaggaatccg aactccaaac cagctacata cgttgaggaa ctcttggatt
      841 ggggctaggt catatctcac gttgagccag aatggcccac gctcatccca tgggagagca
      901 gccggctcag tcggccgttg tagcccagcg gtcctcgaga gctctggcca gctcgtctgg
      961 aacgggcacg atcagagccg tcgcggtacc acggatcttt atcttctccg agggatgcgg
     1021 cggctcctcg tgcttctgaa gaagagtttt caggtagttc accagggtat cctgggcaac
     1081 cttgagaaag ttgtcgttga cggatgcgat ggcctgacac tcaggcagat ca
//
LOCUS       DASRPQ010001838         1024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_839926, whole genome shotgun sequence.
ACCESSION   DASRPQ010001838 DASRPQ010000000
VERSION     DASRPQ010001838.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_839926"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1024)
                     /locus_tag="VFD73_20840"
     CDS             complement(<1..>1024)
                     /locus_tag="VFD73_20840"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI76419.1"
                     /translation="VAALANTIEVDPMGLMEGTQFLLHRSQHLEASDEERNEASNIVM
                     ALDGFPLALDQAGAYIEETGCGFGDYLQLYEQHRARLLARRGKQATPYPDSVATTWDL
                     SFQKVEQAHPAAAELLRLCAYLSPDHIPEELITEGAQQWPPVLQEVVADRFTFNELLE
                     ALLAFSLVKRLAEERLLSVHRLVQAVQVDRMEPEEQRTWAQRVVRAVHTLFPADPKNE
                     VASWPQCLRYLEQVQACDRLIQEHGLHLIEAAELLDRAGSYLREHASFSLAEPLLQRA
                     VHIREQVLGPEHADVAPSLVNLGILYAHQGRYEQAEPLWQRALHIREQALGPQHAQVA
                     VPLNNLG"
BASE COUNT          201 a          323 c          310 g          190 t
ORIGIN      
        1 ggcccagatt gttgagggga acagccacct gagcgtgttg tggacccagg gcctgttctc
       61 gaatgtgcaa ggcccgttgc cacaaaggtt ctgcctgttc atatcgtcct tggtgagcgt
      121 agaggatgcc caggttgacg agagaagggg ccacatcagc gtgctcagga cccaggacct
      181 gttctcggat gtgcacggct cgttgcaaca acggttccgc cagactgaag gaggcgtgtt
      241 cccgcaaata ggagcccgcc cggtccagca gctcagcagc ttcgatcagg tggaggccat
      301 gctcctggat cagccggtca cacgcttgca cctgctccag atagcgcagg cactgcggcc
      361 agctcgccac ctcgtttttg ggatcagccg gaaagagggt atggacggcc cggaccactc
      421 gctgggccca ggtgcgttgc tcctccggct ccatccgatc cacctgcacc gcctgcacca
      481 gccgatgcac actcagcaga cgttcctcag ccagccgctt aaccagcgaa aaggccaaca
      541 acgcctccag gagctcattg aaggtgaagc gatcggccac cacctcctgg agcacggggg
      601 gccactgctg cgccccttca gtaatgagtt cttcgggaat gtgatcgggg gaaagatacg
      661 cacacaaccg caacaactcg gctgccgccg gatgggcctg ctcgaccttc tgaaacgaga
      721 gatcccaggt ggtggctacc gagtcgggat agggcgtcgc ctgcttgccc cggcgagcca
      781 gcagcctggc acgatgctgc tcatagagct ggaggtagtc gccaaagcca catccggttt
      841 cttcgatgta ggctcccgcc tgatcgaggg ccagggggaa gccatcgagg gccatcacaa
      901 tattactggc ctcgttgcgc tcctcatcgc tcgcctcgag atgctggctt cgatgcagca
      961 agaactgggt cccttccatc aggcccattg ggtccacttc gatggtgttg gccagggccg
     1021 ccac
//
LOCUS       DASRPQ010001839         1709 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4281527, whole genome shotgun sequence.
ACCESSION   DASRPQ010001839 DASRPQ010000000
VERSION     DASRPQ010001839.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1709
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4281527"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..253)
                     /locus_tag="VFD73_20845"
     CDS             complement(<1..253)
                     /locus_tag="VFD73_20845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HZI76420.1"
                     /translation="MIELRSNVPDGPIEQKWDKHRFEIKLVNPANKRKYTILMVGSGL
                     GGASAAASLSELGYNVKCFCFQDSPRRAHSIAAQGGINAA"
     gene            complement(250..909)
                     /locus_tag="VFD73_20850"
     CDS             complement(250..909)
                     /locus_tag="VFD73_20850"
                     /inference="COORDINATES: protein motif:HMM:TIGR02046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b subunit"
                     /protein_id="HZI76421.1"
                     /translation="MNRLQLFWRSSVGKKVVMAITGLIMLLYLITHVLANLLVFQGPT
                     RINAYSAFLHGTGGALWVARLVLLAALVLHVIAAVQLAGRRQEARPIGYAAGREPQVS
                     TFAARTIRWGGALILAFLIYHILHFTIGSAHPDFVEGDPYHNVTTGFRNPIVVIVYLV
                     AMAAVGLHLYHGVWSSGRSLGISPPSPTPLRRTVAVVLAVMIWLGFTVIPIAVYAGVV
                     R"
     gene            complement(923..>1709)
                     /gene="mdh"
                     /locus_tag="VFD73_20855"
     CDS             complement(923..>1709)
                     /gene="mdh"
                     /locus_tag="VFD73_20855"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HZI76422.1"
                     /translation="QSGPVEGFDTRVIGSGSYDEAAGAEVFVVTAGIARKPGMSRDDL
                     VKTNAGIVRSVTEQIGRVAPKSIIVVVSNPLDVMCYVAMKASRFPRERILGMAGVLDT
                     ARYRTFLSQALDISVEDIQAMVLGGHGDTMVPLVSYTTVSGIPVTQLIDRDKLDSIVT
                     RTRNGGAEIVAFLKTGSAYYAPSAAAVQMVEAIALDRKRVLPCSVWLQGEYGLRDVFC
                     GVPCKLGRAGLERIIEVTLTDQEREELRKSAEAVRSTQAVVDL"
BASE COUNT          332 a          552 c          522 g          303 t
ORIGIN      
        1 tggctgcgtt gataccgccc tgcgcggcga tgctatgggc gcgccggggg gagtcctgaa
       61 agcagaagca tttgacgttg tagcccagtt cgctgagcga ggccgctgcg gatgcgccgc
      121 ccaacccgct tccgaccatc agaatggtgt atttccgctt gttcgccgga ttgaccaact
      181 tgatctcgaa ccggtgcttg tcccatttct gctcgatggg accgtccggg acgttggagc
      241 gcaactcgat catcgtacga ctcccgcata caccgcgatc ggaataacag tgaagccgag
      301 ccagatcatc accgccagca ccacggcgac ggtgcggcgg agtggagtgg gcgacggcgg
      361 gctgatgccg agactgcggc cgctactcca gacaccgtga tacagatgca accccaccgc
      421 cgccatcgca accagataga cgatcactac gatcggattg cggaacccgg tcgtgacatt
      481 gtggtaggga tcgccttcga cgaagtcagg atgggcactg ccgatggtga aatggaggat
      541 gtgatagatc agaaaggcca gaatgagcgc cccgccccag cgtatcgtgc gcgccgcgaa
      601 ggtcgagacc tggggttctc gtcccgcggc atagccgatc gggcgtgcct cctgccgccg
      661 gccggccagc tgcaccgctg caatcacgtg gagcaccagc gccgcaagca gcaccagccg
      721 cgcgacccag agcgcccctc cggtcccatg gagaaaggcg ctgtatgcgt tgatcctggt
      781 cgggccctgg aacaccagca ggttggccag cacgtgagtg atgaggtaca gcagcatgat
      841 gaggccggtg atggccataa cgaccttttt cccgaccgag gacctccaga acagttgcaa
      901 ccgattcatc gagccgactc gttcacagat ccacgaccgc ctgagtggac cggaccgcct
      961 cggcggattt gcggagctcc tctcgttcct ggtcggtgag ggttacttca atgatccgtt
     1021 ccagacccgc ccgtcccagc ttgcagggaa caccacagaa cacatcccgc aagccgtact
     1081 ccccctggag ccagaccgag cacggcagaa ctcgctttcg gtccagcgca attgcttcga
     1141 ccatctgcac cgcggccgcg ctgggggcat agtaagccga tccagttttg agaaacgcga
     1201 caatttcggc gccgccattt ctggtgcggg tcacaatgct gtcgagcttg tcccggtcga
     1261 tcagttgggt gactgggatg ccggacacgg tggtgtacga gaccagcggc accatcgtgt
     1321 ctccgtggcc gcccagcacc atggcttgaa tgtcttcgac cgagatgtcc agcgcttggg
     1381 agaggaaggt gcgatagcgc gccgtatcca gcaccccggc catcccgaga atccgctccc
     1441 gggggaagcg actcgctttc atggcgacgt agcacatcac gtccagcggg ttggacacaa
     1501 ccacgatgat ggacttggga gcgacccgcc cgatctgctc ggtcactgac cgaacgatcc
     1561 cggcgttggt cttgaccagg tcgtcacggc tcatccccgg ctttcgagcg atgcccgcgg
     1621 tgacgacgaa gacctcggct cccgccgcct catcgtagct tccactgccg atgacccgag
     1681 tgtcgaatcc ctcgaccggg cccgactgc
//
LOCUS       DASRPQ010001840         2425 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4608174, whole genome shotgun sequence.
ACCESSION   DASRPQ010001840 DASRPQ010000000
VERSION     DASRPQ010001840.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2425
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4608174"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..918
                     /locus_tag="VFD73_20860"
     CDS             <1..918
                     /locus_tag="VFD73_20860"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HZI76423.1"
                     /translation="GAADRGNVHTSGGDAWQHDVCAHGTHVTSTILGYQLSPTLRFQG
                     TAPQATVIPVQLHSEGSANTPRDCSFFSSVAAAGLLYFAQLKQGPLAGQPLVVNNSWG
                     SGSNDPLTEAAVNYALAHGVLLVFSAGNAGDAGMGYPGALPQVISAAASGFTGEWTAC
                     GGPGSEFSWWLLCDVPDPTNPADFYITDFSSREHTGQDLDVAAPGSWVVGPFQLNRGK
                     PNFFFLGGTSMAAPHVTGTVALMLQKNPGLSESQAESIIESSAVPIGAGCRSVILVPG
                     ATTPEQICWGANATGAGLLDAPAAVAATP"
     gene            1045..1197
                     /locus_tag="VFD73_20865"
     CDS             1045..1197
                     /locus_tag="VFD73_20865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HZI76424.1"
                     /translation="MLWTAFTVLLALWLLGIVSANTFGGFIHVLLVLAIALVLMRGIQ
                     ADRTPD"
     gene            complement(1202..>2425)
                     /gene="dacB"
                     /locus_tag="VFD73_20870"
     CDS             complement(1202..>2425)
                     /gene="dacB"
                     /locus_tag="VFD73_20870"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HZI76425.1"
                     /translation="GEWLGDWSLEVNGDPSLERAEGSGPTLYDLATQLAQSGVRRLTG
                     PLQVTSADGPATAVYPAVWSPRHMGRIFAPLVGPLMVHENIVWFTIRPGRRPGERARL
                     VEVAPQGISSLISVTATTRNGRRSRLHLIARHGGGWVVTGTMGVRAIPRRLTATARDP
                     KAVLAAVWGTALHRAGIVWNRGGKSTLPLGGTQRVLAEVASPPLDSLASEINRRSLNA
                     GAELLLQWAGGRELGPAHLMDHIETITGQKAGAYLVDGSGLSYDDRVSASTFVSYLAK
                     FPATSAGRNFPQLLPSNGTGTLRRLNTGFPAAGVVRAKTGTLGSVSSVVGYLGRPEGT
                     LLISLLYNGNRPAEARQAQWNLFRLLGADGVVIPADTTAGEPVQLGGDQTTRPAWWPS
                     ASEADSNAADTLEGE"
BASE COUNT          424 a          782 c          754 g          465 t
ORIGIN      
        1 ggagccgcgg accgcggcaa cgtgcatact tccggtggcg atgcctggca gcatgacgta
       61 tgcgcacatg ggacccacgt cacgagcacg atcttgggct atcagctctc ccccactctc
      121 aggttccagg gtaccgctcc acaagcgacg gtgattccgg tccagctcca ctccgaaggc
      181 agcgccaata ctccaagaga ttgcagcttc ttcagctcgg ttgccgctgc gggactgctc
      241 tacttcgcgc agctgaagca gggccccctc gcaggtcagc ccctggtggt aaataacagc
      301 tggggctcag gcagcaacga tcctttgacc gaggcggcgg tgaactacgc tctggcccac
      361 ggagttctcc tggtgttctc ggccgggaat gctggtgatg cgggcatggg gtatcctggc
      421 gcgttaccgc aggtcatctc cgccgcggca agcggcttca ccggggagtg gacggcgtgt
      481 ggcggccctg gctcagaatt ctcttggtgg cttctctgtg atgttccgga tccgaccaac
      541 cctgccgact tttatatcac cgacttctcc agccgagagc acactggcca ggatctcgac
      601 gttgctgcgc cgggctcctg ggtagtagga ccgttccaac tgaatcgggg taagcccaac
      661 ttcttctttc tgggcggcac atcgatggcc gcgccgcacg tgaccggaac agtcgcgttg
      721 atgttgcaga agaacccagg gctgagcgaa tcccaggcgg agtccattat cgagagctct
      781 gcggtcccga tcggcgcagg gtgccgatca gtcattctgg tgcccggagc cacgacccct
      841 gagcagatct gctggggagc aaatgcaacc ggtgccggcc tgctggatgc tccggcggct
      901 gtcgcggcca ctccgtgagc tgaacgatta tctagaactg aaagcgggcc gctggttgcg
      961 gcccgctttg ttctcacacc tggcgaagca ggtagcgcgc tccggtcact ggcagctgag
     1021 aggatttcaa agcactataa tcgtatgctc tggaccgcct tcaccgttct tctggctctc
     1081 tggcttctcg gcattgtgtc ggccaatacg tttgggggct tcatccacgt actgctcgtg
     1141 ctggcaattg cgttggtgct tatgcgggga attcaggccg atcgaacgcc ggactaggat
     1201 tctactctcc ctccagcgtg tctgctgcgt tgctgtcggc ctcgctggca cttggccacc
     1261 acgctggccg agtcgtctga tcgccgccta gctgcaccgg ctctcctgca gtcgtatccg
     1321 ctggtatcac tacaccgtcc gccccgagta accggaacag attccattga gcctggcgag
     1381 cctccgcggg ccggttgccg ttatacagca gggaaatcaa aagagtgccc tcaggccgac
     1441 ccagatagcc caccacgctc gaaacactgc ccaacgttcc cgtcttggcg cgaaccactc
     1501 cagccgcggg aaatccggtg ttcagccgcc gcagggtccc agttccgttc gaagggagca
     1561 gctgcggaaa gttccgtccc gcggaagtgg cggggaactt ggccagatat gagacgaatg
     1621 tcgaagcgct gacccggtca tcgtaggaaa ggccgctgcc gtccaccagg tacgcgccgg
     1681 ccttctgccc ggtgatggtc tcgatgtggt ccatcaagtg ggcaggaccg agctcgcgcc
     1741 cgccggccca ctgcagcagc agctcggcgc cggcattgag gctccgccgg tttatctcgc
     1801 tggcgagcga gtccaaaggt ggggaggcaa cttcggccag cacgcgctgc gttccgccca
     1861 gagggagcgt gctctttccc ccccgattcc acacgatacc ggctctatgg agggcggttc
     1921 cccagaccgc cgcaaggacg gccttcggat cccgggcagt ggccgtgagc ctccggggga
     1981 ttgcccgaac ccccatcgtt ccagtgacca cccatccgcc gccgtgcctc gcgatgagat
     2041 gcaggcggga gcgacgtcca ttgcgggtcg tggcagtaac tgagatgagc gagcttattc
     2101 cctggggtgc aacttcgacc agtcgggctc gttcaccggg tcgccttccc gggcgaatgg
     2161 tgaaccacac gatgttttcg tgcaccatca gcggcccaac cagaggagca aagatccggc
     2221 ccatgtgccg gggagaccag accgcgggat acactgcggt tgccggacca tctgcactgg
     2281 tcacctgcag cgggccggtc agccggcgga cgccggactg tgcaagctgg gtcgctaagt
     2341 cataaagggt ggggccggaa ccctcggcac gttccagcga gggatcgccg tttacctcca
     2401 gcgaccagtc gccgagccat tcccc
//
LOCUS       DASRPQ010001841         1057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3977888, whole genome shotgun sequence.
ACCESSION   DASRPQ010001841 DASRPQ010000000
VERSION     DASRPQ010001841.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3977888"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..509)
                     /locus_tag="VFD73_20875"
     CDS             complement(<1..509)
                     /locus_tag="VFD73_20875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017504874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HZI76426.1"
                     /translation="MSTVSPAKRQVLTNRRDAPLQTPTDLTAAATKEISGAMNAILAD
                     VFALYLKTKNFHWHMSGPHFRDYHLLLDEQADQIYAMTDPIAERVRKIGGLTLRSIGH
                     IAQLQRVSDNDAEFVEPGDMLAELREDNKNLAAHLREAHNVCEEHRDLATASLIEVWI
                     DETERRTWFL"
     gene            complement(614..>1057)
                     /locus_tag="VFD73_20880"
     CDS             complement(614..>1057)
                     /locus_tag="VFD73_20880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76427.1"
                     /translation="RVKRNPRTFGLVGCAVVLTLAGAYTLSASGAGRSLCPKNSQFLL
                     LMDPIPPTSAGSELEVYYDVCGLRAGTQYRGKLVLQPQTTSGKKVAKAKPVTVAIRDK
                     ADGPATRRRQDVQLGSAKAAAYTLELSVTDAQGRERKKVQKIRMH"
BASE COUNT          183 a          337 c          322 g          215 t
ORIGIN      
        1 aggaaccagg tgcgccgttc ggtctcgtcg atccagacct cgatcagact ggcggtggcc
       61 aggtcgcggt gctcctcgca cacgttatgg gcctcgcgca ggtgagccgc cagatttttg
      121 ttgtcttccc gcagctcggc cagcatgtcg ccaggctcca cgaactccgc gtcgttatca
      181 ctgacccgct ggagctgcgc aatgtgccca atggagcgga gggtcagccc gccgatcttt
      241 cgcacccgct ccgcgatggg atcggtcatg gcgtagatct ggtcggcctg ctcgtcgagc
      301 agcagatggt aatcccggaa atgcgggccg ctcatgtgcc agtggaaatt cttggtcttc
      361 agatacaggg cgaacacgtc ggccaggatc gcgttcatgg ccccggagat ttccttggtt
      421 gccgcggcgg tgagatcggt cggcgtctgc aggggggcat cgcggcggtt ggtaagaacc
      481 tgtcgcttgg ccgggctaac tgtactcatg actgtgcctc gttcaggggg atcgtcaact
      541 ctatccgccg aacgtaacgc cgcgttgcca acaagcaaag cggcgggccc cagcaatggt
      601 gctacgagac tgatcagtgc attcgaatct tctgcacctt cttgcgctcc cggccctgag
      661 catcggtcac cgacagctcc agggtatatg ccgcagcctt ggctgagccg agctggacat
      721 cctgacgccg ccgggtagca ggtccgtcgg ccttgtcccg aatcgcaacc gtcaccggct
      781 tcgctttggc tactttcttt ccagaggtcg tctgcggctg cagcaccagc tttccgcgat
      841 actgcgtgcc ggcgcgcaac ccgcacacat cgtagtagac ctccaactcc gatcccgccg
      901 atgtgggcgg aatgggatcc atcagcagca gaaattgtga gttcttggga cacaacgacc
      961 gtccagctcc cgaggcactc agggtgtagg cgcccgccag tgtcagcacg accgcacatc
     1021 ccacgagtcc gaaggtgcgc gggttccttt tcacccg
//
LOCUS       DASRPQ010001842         1047 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4281835, whole genome shotgun sequence.
ACCESSION   DASRPQ010001842 DASRPQ010000000
VERSION     DASRPQ010001842.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4281835"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            707..>1047
                     /locus_tag="VFD73_20885"
     CDS             707..>1047
                     /locus_tag="VFD73_20885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76428.1"
                     /translation="MHPPGSEDFESTAVGWLLDVVPPDYRLHGVLRRYPVALAALARY
                     HSKACVEGARQGYRMARTELAEALPPHAIDTVLAAYRKEGARLAATAEAVDLVERALR
                     GEVFTPKMSLPP"
BASE COUNT          180 a          314 c          368 g          185 t
ORIGIN      
        1 tgcttccaac gatagctccc catacccaat agtgtcgcat aggagccgga cagggtcccc
       61 cgattcccgg gccggtatcg tcgcaggatc ccgctccgtc gctggccgaa ttggtcagcg
      121 tactcatgtg cttattgaga ccggtgaggc ttgtgttcta cgtcgccgcg cagtcgcaca
      181 tccgcgcggc tttcggtaga aagtgagtct ctaccggaaa gattcggtag agagggactt
      241 tcactgaaat ggatgcgggt tgatctcagc cattttgtaa cttttgtccg gaacggtgaa
      301 tctggatccg gggcagggcg gggtcactcc ccaatcgcct gtcaacgcat cccaccccag
      361 acacccctct cgccccacaa gcatcgcctc tctgcgaacc aaacgctccg ggggaggcat
      421 ggatgtggcg ctgtgcaccg aagtttcggt aggacgccac aaaccactga tttgtacggg
      481 ccacgggtgc ggtagaggtt ggaggaaggg ggcaggggtg gcgatagcgg gggcagtgca
      541 tagcgggggt gcaggacatg caggcgtcga ggtcagggct gggtggtcag ggctgggtgg
      601 tcagcctgac gcgcagcttg ggtgcgcgca tagctagaat gtgagttcga ttagctggta
      661 tgctgtcgag atgggcgcat acataccacc ggggtggccg gccggggtgc acccgcccgg
      721 cagcgaggat ttcgagtcca cggcggtcgg ctggctgctc gacgtggtgc caccggacta
      781 ccgcctgcac ggggtgctgc gccggtaccc ggtcgccctg gccgctctgg ccaggtacca
      841 ctcgaaggcg tgcgtggagg gtgcgcgcca gggataccgc atggccagga cagagctcgc
      901 ggaagcgctg ccgccgcacg cgatcgacac ggtgctggcc gcctaccgca aggagggcgc
      961 ccggctggcc gccaccgccg aggccgtcga cctggtcgag cgcgcgctgc gcggcgaggt
     1021 cttcacgccg aagatgagcc tgccacc
//
LOCUS       DASRPQ010001843         4099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4281869, whole genome shotgun sequence.
ACCESSION   DASRPQ010001843 DASRPQ010000000
VERSION     DASRPQ010001843.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4099
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4281869"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..469
                     /locus_tag="VFD73_20890"
     CDS             <1..469
                     /locus_tag="VFD73_20890"
                     /inference="COORDINATES: protein motif:HMM:NF013073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HZI76429.1"
                     /translation="VLPDGRRGRTVAGSLRRQSEVISAARAKAPERWASEHFAGTPYQ
                     WGGVTPWGADCSGLVQTTFAARGAKLPRDAAQQVAVGSPISPDAIRPGDLLFFRSESG
                     AVNITHVAFAAEADTLVHSTLACGGVVAESWLPGSRAAGLRERLVAVRRLEER"
     gene            466..1161
                     /locus_tag="VFD73_20895"
     CDS             466..1161
                     /locus_tag="VFD73_20895"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HZI76430.1"
                     /translation="MKKLVLFDIDGTILLTSGAGGRAIIAATQEIIRHRNALDGVRFD
                     GKTDPQIVSELLDAAGHRRPHPAERIEEICRRYVELLAYELDRSDNYTSVMPGVTELL
                     DQLETHGDVVLGLLTGNLATGAALKLRSAGLDPERFRVGAYGSDSADRAALPPIAAQR
                     AEGYFGRIPSGPEVVIIGDTPADIACGQCINARSVAVATGRYTVADLTACKPHAVFQD
                     LSNTEQVLEAILV"
     gene            1165..1926
                     /locus_tag="VFD73_20900"
     CDS             1165..1926
                     /locus_tag="VFD73_20900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76431.1"
                     /translation="MTIQSTSVDAWMVPELGPSLGKLCDPPDLEPPRGSLGVSFEDIR
                     LDLVTGLFDVAGAARSFAAAGDRQGAIASLARLVWIELWERSVMSAAGRLADLVNSRF
                     REAAAESHLPARQLEQVLLSEQDRRAIAARLGSGGAGFVAALDAMEQTVPAAAAPGAR
                     GRQNVEEWQIALAAVARKLESAWLALTESALVEQQRWKSEIDQVRRWQRPAWPLWILT
                     AILLLVATYLGLILGGYLPVPEFLTAFANFWWARL"
     gene            1923..2312
                     /locus_tag="VFD73_20905"
     CDS             1923..2312
                     /locus_tag="VFD73_20905"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HZI76432.1"
                     /translation="MTVVGVGIDLVDLARVRRLLADKGDQAMHRFFSDEERSYLGTRP
                     DATGHAAARIAAKEAVYKAMQSLPGARAVGWREIEIARDGDGRPAIRLHGLAARLSRD
                     RGGLQISISLTHSELSAGAVAVIEAPD"
     gene            2375..>4099
                     /locus_tag="VFD73_20910"
     CDS             2375..>4099
                     /locus_tag="VFD73_20910"
                     /inference="COORDINATES: protein motif:HMM:NF015213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
                     /protein_id="HZI76433.1"
                     /translation="MILIGSALLVATLFHPIQANAQQDPAPAVRRLAATAQLAAQEYR
                     LGVESGRVVAPAEVAEATLFLGESRRSAELLPESSRGETIRQVDSLIALVRRTAPPAV
                     VDARVQHLVKSLGARYNVVLDQLPADAPLVARGASVYRESCSGCHGQLGRGDGPLGRT
                     LDPKPADLADLSALKGTAPLDFYRRISIGVVGTAMPAFEARLSVEDRWAVALYASLLR
                     LPPPAGSVPPAMQQFSTTGKMSDEQVLAALGATKQTVDALARVAAVRSFQSDAASNVN
                     SQVFSQVRAQVESTYALARRGDTSASSRAFDAYMTFEQVESAVRIKNPGLANDLEAGF
                     AALRTRAAGGATIAELGRIRLQLEAGLENAERILADRLSPANLFVQSFIILLREGLEA
                     LLVVGALLTFLTKMGAAHRKRDIHIGVGAAVVASLFTAFAVETIFELTPAKREALEGA
                     TMVVATGVLFYVSYWLLSKMEVAKWNHFVKSKVQDALTSGSGLALASAAFLAVYREGF
                     ETVLFYKALFVSGGSGAASMPIIAGIVLGSLVMVAVYFGINRFGLRLPLKPFFGVTSA
                     FLYYMAFVF"
BASE COUNT          686 a         1248 c         1378 g          787 t
ORIGIN      
        1 cgtgctgccc gacggcaggc gcggccgcac cgttgccggc tcgcttcgca gacaatccga
       61 ggtgatctcc gccgctcggg ccaaggctcc ggagcgctgg gccagcgagc actttgccgg
      121 aacgccctat caatggggag gggtcactcc ctggggagca gactgctccg gtctggtgca
      181 gaccactttt gccgcgcgag gggcaaaact tccccgagat gcggcacagc aagttgccgt
      241 gggcagccca atttctccgg atgcaatccg gcccggtgac cttctgttct ttcggagtga
      301 aagtggggcc gtgaatatca cgcatgtggc cttcgccgct gaggcggata cgctggtgca
      361 ctccacgctg gcgtgtggcg gtgtggtggc ggaaagttgg cttccgggaa gccgagcggc
      421 gggccttcgg gaacggctgg tagccgtcag gcggttggag gaacgttgaa gaagctggtg
      481 ctctttgaca tcgacgggac gattctcttg accagtgggg caggcggacg agccattatt
      541 gccgctaccc aggagatcat ccggcaccgc aatgctctcg acggcgttcg cttcgacggc
      601 aagaccgatc cgcagatcgt cagtgagctg ctggatgccg cagggcatcg acgtccgcac
      661 ccggccgagc gaatcgagga gatttgccgg aggtatgtgg agctgctggc ttacgagctc
      721 gaccgctccg acaattacac ctcggtgatg cccggtgtca ccgagctgct cgaccagttg
      781 gagacacacg gcgacgtggt gctgggcctc ttgaccggaa acctggcgac cggcgcggcg
      841 ctgaagctcc gctcggccgg gctcgatccc gagcgattcc gggtgggcgc ctacggctcc
      901 gactccgcgg accgggcggc gctccctccg attgccgcgc agcgagcgga aggctacttc
      961 ggacgaatcc cgtcaggacc tgaggttgtc atcatcggcg acactccggc ggacatcgcc
     1021 tgcggccagt gcatcaatgc cagatccgta gcggtggcca ccggccgata caccgtcgcc
     1081 gatctcacgg cctgcaagcc gcacgcagtg tttcaggatc tcagcaatac cgaacaggtc
     1141 ctcgaagcca tcctcgtctg accgatgaca atccaatcca cttcggttga cgcgtggatg
     1201 gttcctgagc tgggcccatc gctgggaaag ctgtgcgacc cccctgatct cgagcccccg
     1261 cgcggatcac tcggcgtaag cttcgaggat atccggttgg acctggtcac cggcctcttc
     1321 gatgtggccg gggcggcacg gtcgttcgct gccgcagggg atcgccaggg cgccatagcg
     1381 tctctggcca gactggtatg gatcgagctg tgggaacgtt cggtaatgtc ggcggccggc
     1441 cgcctggccg acctggtgaa ctcgcgattt cgcgaagccg cagcggagtc ccatctgccc
     1501 gcccgacagt tggagcaggt gctcttgagc gagcaggacc ggcgggcgat cgccgcgcgg
     1561 ctggggagtg ggggtgcggg gttcgtcgct gcgctcgatg ccatggagca gacagtcccc
     1621 gcggcggccg cgcccggagc ccgcggccgg caaaatgtcg aggagtggca gatcgcgctc
     1681 gccgcggtag cccgtaagct ggaatccgcc tggctcgcac tcaccgagtc tgctctggtc
     1741 gagcagcagc gctggaaatc ggaaatcgat caagtacgga gatggcagcg accggcctgg
     1801 ccgctctgga ttctgactgc catcctgctc ctggttgcga cctacctggg attgattctg
     1861 ggcggctatc tgccggtgcc ggagtttctc actgcctttg cgaatttttg gtgggcccgg
     1921 ctatgacggt cgtaggcgtt ggaatcgacc tagtcgacct cgcccgggtc cgccgcctgc
     1981 tcgcggataa gggtgaccag gccatgcacc ggttcttctc ggatgaggag cggagctacc
     2041 taggaacgcg gcctgatgct acgggacacg ccgctgcccg gatcgctgcc aaggaggccg
     2101 tctataaggc aatgcagtcg ctgccggggg ccagagcggt tggatggagg gagatcgaaa
     2161 tcgctcgaga tggcgatggc cggcccgcaa ttcggctgca cggcctggct gctcgactct
     2221 cccgcgaccg gggcggcctc cagatcagca tctccctcac tcactcagag ctttcggccg
     2281 gggcggtcgc ggtgatcgag gcgccggact agccgctctt tcaattccga ctagaacact
     2341 ctagtttgag gttgacgctg aaaactgagt gaaaatgatt ctcatcggca gcgccctcct
     2401 ggtcgctacc ctgttccatc cgattcaggc aaacgcgcag caggaccccg ctccagcggt
     2461 gcgtcggctg gcagccactg cccagcttgc tgcccaggaa taccgccttg gcgtggaaag
     2521 cggccgggtg gtggcccccg ctgaggtagc cgaggcaacg ctgttcctgg gtgagtctcg
     2581 ccgctctgcc gaactgctcc ccgagagttc acggggagag acgatccgtc aggtggattc
     2641 tttgatcgcg ctggtgcgtc ggactgcccc gcccgcggtg gtggacgcac gggtccagca
     2701 cctggtgaag agcttgggtg cccgctacaa cgtggtgctg gatcaactac ccgctgacgc
     2761 tccgttggtg gcccgaggtg cctcggtgta tcgggagagc tgttccggtt gccatggaca
     2821 gctcggtcga ggggatgggc cgctgggccg gacgctcgat cctaagccgg cagatctggc
     2881 cgacctttcc gctttaaagg gcaccgctcc gctcgacttc tatcgtcgaa tcagcattgg
     2941 tgtggttggc accgcgatgc cggcattcga agctcggctc tcggtggagg accgctgggc
     3001 cgtcgcactc tatgccagcc tgctgcgcct gcccccacca gccggcagtg tgccacccgc
     3061 aatgcagcag ttcagcacca ctggcaagat gtcggacgag caggtccttg ccgccctggg
     3121 cgcgaccaag cagacggtag acgcgctggc gcgtgtggcc gcggtccgga gttttcagtc
     3181 ggacgcggcc agcaacgtga atagtcaggt cttttcccag gtcagagcgc aggtcgagtc
     3241 cacgtacgcc ctagcccgcc ggggggacac ctcggccagc agccgggctt tcgatgcgta
     3301 catgaccttc gaacaggtcg agagtgcggt ccgcatcaag aaccccggac tcgccaatga
     3361 cctggaagcg gggtttgcgg cgctgcgaac ccgcgccgca ggaggagcca ccattgccga
     3421 gctggggcgc attcgtctcc agttggaagc cggtctggaa aacgccgaaa gaattctggc
     3481 cgatcggctg tcgccggcga acctgtttgt ccagtcgttc atcatccttc tcagagaagg
     3541 gttagaggcg ctgctcgtgg tgggggctct gctgacattc ctcaccaaga tgggagcggc
     3601 acaccgcaag cgagacatcc acattggcgt gggtgcagcg gtggtggcca gtctgttcac
     3661 cgcgtttgcg gtcgaaacga ttttcgagtt gaccccggca aagcgagagg cgctcgaggg
     3721 tgccacgatg gtggtggcaa cgggagtgct gttctatgtg agctactggc ttctctcgaa
     3781 gatggaagtg gccaaatgga atcacttcgt gaagagcaag gtgcaggatg cgctgacgag
     3841 cggatccggt ctggcgctgg catcggcggc atttctggcc gtgtaccgag aaggcttcga
     3901 gacggtcctg ttttataaag cattgttcgt cagcggtgga tccggggccg caagtatgcc
     3961 gatcattgcc ggtatcgtgc tgggttcact ggtgatggtg gcggtctact tcgggatcaa
     4021 tcgctttggt ttgcgactgc ctctcaagcc gttctttggg gtgacgagtg ccttcctcta
     4081 ctacatggcc ttcgtcttc
//
LOCUS       DASRPQ010001844         1215 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3031335, whole genome shotgun sequence.
ACCESSION   DASRPQ010001844 DASRPQ010000000
VERSION     DASRPQ010001844.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3031335"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(53..388)
                     /locus_tag="VFD73_20915"
     CDS             complement(53..388)
                     /locus_tag="VFD73_20915"
                     /inference="COORDINATES: protein motif:HMM:NF022671.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3024 domain-containing protein"
                     /protein_id="HZI76434.1"
                     /translation="MPAPPETDVARIRKYCRARVPARFRRQIRIEAAVRGNSVTIFEC
                     RPPWHPNLTEWSKVRVAQLRYSASTHHWSLYWADRNGRWHRYDDLDPGPVDNVLKEIE
                     ADPTCIFWG"
     gene            complement(521..790)
                     /locus_tag="VFD73_20920"
     CDS             complement(521..790)
                     /locus_tag="VFD73_20920"
                     /inference="COORDINATES: protein motif:HMM:NF021873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2442 domain-containing protein"
                     /protein_id="HZI76435.1"
                     /translation="MNENYLPVVVGAAVVGDHVLRLLFSDGTVGDVDLSSQRWTGVLE
                     RLNDPAYFAQVAVDPEAGTVVWPGGIDLAPEPLYDQAKANPLAAA"
     gene            complement(801..1094)
                     /locus_tag="VFD73_20925"
     CDS             complement(801..1094)
                     /locus_tag="VFD73_20925"
                     /inference="COORDINATES: protein motif:HMM:NF025088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4160 domain-containing protein"
                     /protein_id="HZI76436.1"
                     /translation="MPRRARVTPRIPASRGTKLVRHYMYWNERDHPVAHFHAYHAGRR
                     ASVSADGVLLAGSLESRALGFVQEWASLRNDEIMPNWERARKNEPLLAIPPLP"
BASE COUNT          205 a          359 c          425 g          226 t
ORIGIN      
        1 tgaaaatcgg aaggcgggga ttgaagatgg cccggtgaga cggggcagtc tgctaacccc
       61 agaaaatgca ggtggggtcg gcttcgatct ctttaagcac attgtcgacg gggccggggt
      121 cgaggtcgtc atagcggtgc cagcgaccgt tgcggtcggc ccagtacagg ctccagtggt
      181 gggtgctggc gctgtagcgc agctgggcca cgcgtacctt ggaccattcg gtcaggttcg
      241 ggtgccacgg cgggcggcac tcgaagatgg tgaccgagtt gccgcggact gctgcctcga
      301 tgcggatctg gcggcgaaag cgagctggga cgcgggctcg gcagtactta cggatcctgg
      361 caacgtcagt ctctggcggt gcgggcacgt gaccacgcta aggctttggc tggctggccc
      421 tggccgtgat cagcccagtt cctgctacgt caaagcggta tgaactcagc gtggctggcc
      481 agtgtgtgat gccctccatg gggcgcagtc ggcgcgaacg tcaggccgct gcaagcggat
      541 tggccttggc ctgatcgtaa agcggctcgg gcgctaggtc gatgccgccg ggccacacaa
      601 cagttcccgc ctctggatcg accgcaacct gcgcgaagta tgccgggtca ttcagtcgtt
      661 cgagcacccc ggtccatcgc tgggacgaca agtcgacgtc cccgaccgtg ccgtcgctga
      721 acagcaggcg cagcacatgg tcaccgacca ccgcggcgcc taccacgacc gggaggtagt
      781 tctcgttcac gtcttcgatc ttagggcagt ggcgggatgg cgagcagtgg ctcgttcttc
      841 ctggcccgtt cccagttagg catgatctca tcgttccgga gactggccca ctcctggacg
      901 aatccgagcg cgcgggattc caagctgccc gcgagcagca ctccgtccgc tgataccgag
      961 gcacggcggc ctgcatggta ggcgtggaag tgggctacag ggtgatcccg ttcgttccag
     1021 tacatgtagt gccggaccag cttggtgccg cggctggcag ggatgcgcgg cgtgactcta
     1081 gcccgcctgg gcattcccgg gaacgtgctg ggaccgggct cagatgggct ggccgatggg
     1141 cgtggcgcca agtgcctctt acctcaagta gcggcaatgt accccaagag atcgttattg
     1201 gccgtgggca ggaag
//
LOCUS       DASRPQ010001845         1330 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3031344, whole genome shotgun sequence.
ACCESSION   DASRPQ010001845 DASRPQ010000000
VERSION     DASRPQ010001845.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1330
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3031344"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..249)
                     /locus_tag="VFD73_20930"
     CDS             complement(<1..249)
                     /locus_tag="VFD73_20930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76437.1"
                     /translation="MRSGADIAAVAGFYRSSLSSGNWRLVSDVTNPDGSIALYAEQNG
                     GPPLWVRIWAPGDTNGTMVQLTGVVLGKDSLKTKRDSSS"
     gene            539..1288
                     /locus_tag="VFD73_20935"
     CDS             539..1288
                     /locus_tag="VFD73_20935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HZI76438.1"
                     /translation="MAGHSKWKQIKRKKAITDAKRASSWTKVIREITVAARSGGGDPG
                     GNPRLRTAIDAAKAVNMPGENIDRAIKKGTGELEGSVYEELTYEGYGPGGAAIFIEAT
                     TDNANRTVAEVRHAFSRNGGNLGATNSVAWMFDRKGQIFVDAARHNEDAALEAALESG
                     AEDFTREGEQYIITTTPPAFHAVQDALRSRGITIDSAELAMVPRNTVRVEGPDAERII
                     RLMDALEELDDVSKVFSNFDIDAAQLAEAEA"
BASE COUNT          273 a          400 c          416 g          241 t
ORIGIN      
        1 ggatgagcta tcgcgttttg tcttgagcga atcttttccg agcaccacgc cagtcagctg
       61 gaccattgta ccgttagtat ctccaggcgc ccagattcga acccagagcg ggggaccacc
      121 attctgttca gcatagagcg caattgagcc gtcggggttc gtcacatcgc tgacgagccg
      181 ccaatttccg ctgctcaggc tgctccggta aaaccccgcc acggctgcga tgtctgcgcc
      241 actccgcatt gtgatctgaa ggccgtctgc gctcccgctc cgggagacta gttgggggtg
      301 gggtgggagc ggcagggtgg gaaacacctg cgccacgctc ggctcttttg ttgctttcgg
      361 ttccgatccg cagcccaaga tcagcacgat cagagcaccg caaaccattc tcgatggtgt
      421 catagagggg tgacactagt ggggttggcg cgttgccgca agcgggtgtg gctcttatgt
      481 ttcgccagcc cgcaccaagc ctgaagttct catcattcgc ctcgcaagga ggtcggccat
      541 ggccggccac agtaagtgga agcagatcaa acggaagaag gccattacgg acgccaaacg
      601 agcttcgtcg tggaccaagg tgattaggga gatcacggtg gcagcccgaa gcggtggagg
      661 cgatcctggg ggcaaccccc ggctgcggac tgctatcgat gccgccaagg ccgtcaacat
      721 gccgggtgag aacatcgacc gggcaatcaa aaagggcacc ggcgagctgg aaggcagcgt
      781 ctacgaggag ctcacctacg agggctatgg tcccggtggc gcggccattt tcatcgaggc
      841 gacgacggac aatgccaacc gcaccgttgc ggaggtccgt cacgcgttca gccgaaacgg
      901 cggcaatctt ggcgcgacta actccgtggc ctggatgttc gaccgcaagg gacagatctt
      961 cgtggacgca gcccgacaca acgaggatgc agcgctggag gcggcactcg aaagcggagc
     1021 cgaagacttc acccgcgaag gagagcagta catcatcact accactcctc ccgcatttca
     1081 cgccgtccag gacgccctcc gctctcgggg aatcactatc gattcggccg agcttgccat
     1141 ggtgccccgc aatacggtgc gggtcgaagg tcccgatgcc gagcgcatca tcaggctgat
     1201 ggatgccctc gaggagctgg acgacgtttc caaagtcttt tccaacttcg atatcgacgc
     1261 agcgcagctg gccgaggccg aagcctgagg ctgcacctgt gagggtgctc ggcatcgatc
     1321 cgggaaccgc
//
LOCUS       DASRPQ010001846         2788 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3031499, whole genome shotgun sequence.
ACCESSION   DASRPQ010001846 DASRPQ010000000
VERSION     DASRPQ010001846.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2788
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3031499"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..878)
                     /locus_tag="VFD73_20940"
     CDS             complement(108..878)
                     /locus_tag="VFD73_20940"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZI76439.1"
                     /translation="MVSNFFDRYPTFYGTTATAAAPGRLNLRYDAIFEQNREIFAGAR
                     VLDIASHDGRWSFAALQAGAAHVTGVEPRAELVASARSTLSEYVDDTTRYCFIQGDIF
                     EVLKSEQFQVDIVMCLGFLYHTLRYNELFAGIRRLNPKYVVIDTTIFHQSQQRAVKLD
                     LDAALVPRDAVRDEYSHGQFVLVGSPTLPGLEMMLNAYDFKVERLSDWAGLIRDNPEA
                     EGIRKDYGTGRRITLLASSSTVTPSDLPLRGYAARAAI"
     gene            1143..1901
                     /locus_tag="VFD73_20945"
     CDS             1143..1901
                     /locus_tag="VFD73_20945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76440.1"
                     /translation="MTAEAAELMAAREEIKRLRATTKRPRCTDRPGTCSANPPPAKCH
                     PAVTRAANPEEELSTDETRISLRVKVPLEDGTAIVEMTGPAVPENGLQAFGDWVLAAL
                     EQHVDGAAETARLMIAALRERDWEGDDVLADQLDALLGSSAMPDLRPLQVDLDELADI
                     LEGDPMYGGGRVDLATGEVWSAPAVNYAWEIGQVDEDGSDDPDKWLWVHCEGSRDGYR
                     DMERFIGTVRDPGVPTGWRSPFPGGERSGGSRTS"
     gene            complement(1898..2338)
                     /locus_tag="VFD73_20950"
     CDS             complement(1898..2338)
                     /locus_tag="VFD73_20950"
                     /inference="COORDINATES: protein motif:HMM:NF019542.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76441.1"
                     /translation="MLIAVRTATFEQLGKAIDDAFARWDHNHLHEFTLVDGTVIIPAR
                     WWDGEKPEGSLDGAKARLGRLRPGEQFAYTFDLGDNWQHLCTVAPQRADPLETLGIIP
                     VGSLPCRGWGDIPSPSTAAAGTGPVTLTLRGKLIPPIQFSGPAP"
     gene            complement(2522..>2788)
                     /locus_tag="VFD73_20955"
     CDS             complement(2522..>2788)
                     /locus_tag="VFD73_20955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76442.1"
                     /translation="PAFIEFAEVGSGSFGFIAVQGEMDCREVERDGRPGVELSWEGND
                     ESDPASGRGWAVLEQNGSLSGRIFFHLGNDSGFTAVREATEGRF"
BASE COUNT          518 a          850 c          940 g          480 t
ORIGIN      
        1 aaggaagtgg cgtaagcccg cagtgggcca ggtaaccctg gtcgttcatg tattgcctga
       61 gattcttgcg cccgtggctg cagcgtttgg agctagccgg gataatacta tatcgcggcg
      121 cgggcggcgt atccacggag aggcagatca ctcggtgtaa cggtgctgct agaagcaagc
      181 agagtgatgc ggcggccagt tccataatcc tttcggatac cttccgcctc ggggttgtcg
      241 cggatcagtc ccgcccagtc agacaggcgc tcgactttga agtcgtaagc gttgagcatc
      301 atttccaggc caggcaaggt cggagacccg acgagaacga actgaccatg ggaatactca
      361 tcccggacag cgtctcgcgg aaccaacgcg gcgtccagat ctagctttac cgcccgctgc
      421 tgggactggt gaaagatagt cgtgtcgatg acaacgtact tgggattcaa ccggcggatc
      481 cctgcgaaca gctcgttgta ccgaagtgtg tgataaagga atccgaggca catgacgata
      541 tcgacttgga actgctcgga cttgagaacc tcaaagatgt caccttggat aaaacagtac
      601 cgcgtggtgt catcgacata ctcggacagc gtcgaccggg cgctggccac caactcggcg
      661 cggggttcca cgccggtcac atgtgccgcg ccggcctgga gagcggcgaa gctccagcgg
      721 ccatcatggc tggcaatgtc gaggacccgg gccccggcaa agatttcccg gttctgctca
      781 aagatcgcgt catacctgag attgagccgt ccgggcgctg cagcggtcgc agtggttccg
      841 tagaaggtcg ggtaacgatc gaagaagttc gataccaacc gtcgctcacc agaagcactg
      901 cgcaactgcg cggtgtgtgg ggtcggcgcc ggttgcctgg caggccccgg cactgttcgc
      961 cggatctcga accccgtcgt gcgagctaga aaacgattca ggttgcgacg tacgttcaca
     1021 agaagagcct agtaaggagt tcgcccattt tggggaaatt accgatcgtg acccatatct
     1081 gccgggtcgc gaagcgggac gcgctggatg cgctggcggt gtaggttccg ggacggccgg
     1141 gcatgactgc ggaggccgcc gagctgatgg ccgcgcggga ggagatcaag cggctgcgcg
     1201 ccacgaccaa gcggccgaga tgcaccgaca ggccgggtac gtgttctgct aaccctcctc
     1261 cggcgaagtg ccacccggcg gtgacgcgtg ctgcgaatcc ggaagaagag ttgagcaccg
     1321 acgaaacgcg catctcgctg cgggtcaagg tccctttgga ggacggcacg gccatcgtgg
     1381 agatgacggg tccggccgtg ccggagaatg gcctgcaggc cttcggtgac tgggtgctgg
     1441 ccgcgctcga gcagcacgtg gacggtgccg ctgaaacggc acgcctcatg atcgccgcgc
     1501 tccgagagcg ggactgggag ggcgacgacg tcctggctga tcagcttgac gcgttgctgg
     1561 gaagcagcgc gatgccggat ctccgccctt tgcaagtgga tctggatgag ctggccgaca
     1621 tccttgaagg cgacccgatg tacggcggcg gacgcgttga cctggcaact ggcgaggtct
     1681 ggtcggcgcc agccgtcaat tacgcgtggg agatcgggca agtggatgag gacggatcgg
     1741 acgatcctga taagtggctg tgggtgcact gtgaaggttc gcgggacggc taccgggaca
     1801 tggagcgatt catcgggacg gtacgtgatc caggcgtgcc gaccggctgg agatcgccat
     1861 ttccgggagg ggagcgttcc ggcggttcaa ggacgtccta gggagctggc ccggagaact
     1921 ggatcggtgg tatgagtttt ccgcggagcg tcagcgtgac cgggcccgtc ccagcggcgg
     1981 ccgtgctggg gctggggatg tcgccccagc cccggcacgg cagcgatccg accgggatga
     2041 tcccgagcgt ttccagcggg tcggcacgct gcggggccac ggtgcacagg tgctgccagt
     2101 tgtcgcccag gtcgaaggtg taggcgaact gctcgcccgg ccgcagcctg cccagccttg
     2161 ccttggcgcc gtccagcgat ccctcgggtt tctcgccgtc ccaccagcgg gccgggatga
     2221 tcacggttcc gtcgaccaag gtgaactcgt gcaggtggtt gtggtcccag cgggcgaacg
     2281 cgtcgtcgat cgccttgccg agctgttcga acgtcgcggt gcggacggcg atcagcaccc
     2341 ggcctggcct gggccatagg tcccagtgtg cacaccgtgc accagctcca ccgtgatcgc
     2401 cagataagta cgagccaccc ttgcctccac cacaagccgg ccggtcatca agccgtaggt
     2461 cacgcagatc agcggtccgc agctggctca ccgtaccacc cgcccgccag atgaaggatg
     2521 ctcagaagcg gccttcggtc gcctcgcgga ccgccgtgaa gcctgagtcg ttgccaaggt
     2581 ggaagaagat gcgtccgctc agcgagccgt tctgctccag cacagcccaa ccgcggccgc
     2641 tggccggatc ggactcatcg ttgccctccc aggagagctc cacacccggc cgcccgtccc
     2701 gctccacctc gcggcagtcc atctccccct ggacggcgat aaagccgaaa ctgcccgacc
     2761 cgacctcggc gaactcgatg aacgcggg
//
LOCUS       DASRPQ010001847         4595 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4282327, whole genome shotgun sequence.
ACCESSION   DASRPQ010001847 DASRPQ010000000
VERSION     DASRPQ010001847.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4595
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4282327"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1508)
                     /locus_tag="VFD73_20960"
     CDS             complement(<1..1508)
                     /locus_tag="VFD73_20960"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HZI76443.1"
                     /translation="MTHSLLNRPDRLAALRQTALLDTPPEEGFDRLTRMAARLLGAST
                     SLIALVAADRQFFKSAIGLPEPFASQRVAPLSFSFCSTVVSTGEPLIVEDARRHPLLR
                     HSPAVRELGWVSYAGVPLITRDGHVVGSFCVVDRMPRLWSERDIALLQDLAASAITEI
                     ELRQEIANRRQAELGRRDTEEQLHSGIEQIGIGVGLITLDGRWLRVNRALAEFLESSP
                     DELVGLPAEPRTYPDDVASDREASRLLLAGESRSYTMEKRYLTVSGRVVWALVNVALA
                     TGSETQPAHFITTVQDITDRKAAEAALEEREERYRLLIQVSVQSVRGWDLATDKMEWD
                     RGTVPPLDYQWGDVAETTDWWYQRIHPDDRERVVASLDQAIAAGERTWSQDYRFRRAD
                     GRYAVVADRGGILSDPTGRPFRVVASLVDLSDADRQRRQLQQAMEVLPFGVWLLDPHG
                     RVVLTNAASQALWGKPTEAAEALAAARACWASTGELLRLEDWAGWRAILRGET"
     gene            1745..2365
                     /locus_tag="VFD73_20965"
     CDS             1745..2365
                     /locus_tag="VFD73_20965"
                     /inference="COORDINATES: protein motif:HMM:NF013982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 family protein"
                     /protein_id="HZI76444.1"
                     /translation="MRLLPRDEKFFDLFSAVASLSVEAARLQLDLLKADQLHRGPIVD
                     AIKRLEHEADEITHEVVTRLDRVFITPLDREDIHLLASRLDDVVDLIDGTAHRVKMYH
                     AGEAPPGALLMAEVVLRATQALLIAVQGLEKNRDHVVLDACAQVKRLEEEGDSVYHEW
                     VARLFDGSPDALVVIKWKEIYDTLEKTLDHMEDAGNVLESISIKHA"
     gene            2368..3411
                     /locus_tag="VFD73_20970"
     CDS             2368..3411
                     /locus_tag="VFD73_20970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HZI76445.1"
                     /translation="MSHEILYVLVIVAVALAFDFINGFHDSANSIATVVSTRVLSPGV
                     AVLWAAFFNFMAAFVVGTAVAKTIGKGLIDPQVIDPSVVLGALLGAIIWDLITWYLGL
                     PTSSSHALLGGFAGAAIAKAGFGALLLAGWVLPVAFIVISPLLGMAIALGLTVGLSWL
                     LRSFRPGPLDKAFRRLQLVSAGLYSLSHGANDAQKTMGIIVGLLVSVKHLFVSQTGWM
                     NFLYVPTAEHIPLWVEMGAYTAIACGTALGGWRIVKTMGTRITKLRPFGGFCAETAGG
                     ITVLIASRLGVPVSTTHTITGAIVGVGSAQRVSAVRWGVATRIVWAWLLTMPMSAAIA
                     ALMYLLLSKRIGL"
     gene            complement(3414..4034)
                     /locus_tag="VFD73_20975"
     CDS             complement(3414..4034)
                     /locus_tag="VFD73_20975"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI76446.1"
                     /translation="MDPDEFHPRFRSDAYRASLGLGPNDLLVTYIGRIAREKNLKHLL
                     SAWNALQAERGNAVLVFVGRGPLEEEIRRRELPGVHVLGLLHDRELAAAYASADIFVF
                     PSATETFGNSLLEAMGSGLPCIAASAGGVLEFARHAGNAWLVAPNSASALTHGLRRLM
                     HDPGLRQKLSEGGLKTASERSWDQVYDSLIGDYQAAIASRSVVRAA"
     gene            complement(4035..4430)
                     /locus_tag="VFD73_20980"
                     /pseudo
     CDS             complement(4035..4430)
                     /locus_tag="VFD73_20980"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
BASE COUNT          838 a         1447 c         1462 g          848 t
ORIGIN      
        1 gtctctccgc gcaggatcgc gcgccacccg gcccagtcct ccagccggag cagctcgccg
       61 gtggacgccc agcaggctcg cgctgcagcc aaggcttccg cggcctcagt gggtttgccc
      121 cagagcgcct ggctggcggc attggtgagg acgacacggc cgtgaggatc gagaagccaa
      181 acgccgaatg gcaacacttc catcgcctgc tgcaactgcc gccgctggcg atcggcgtcg
      241 ctgagatcga cgagcgatgc gaccacgcga aacggtcgcc cggtaggatc cgagagaatg
      301 ccaccccgat ccgccaccac cgcgtagcgt ccatcggctc ggcgaaatcg gtagtcctgc
      361 gaccaggtcc tctcccccgc tgcgatcgcc tggtccaggc tggccaccac cctttcccga
      421 tcatcggggt ggatcctctg gtaccaccag tcggtggttt cggcgacgtc accccactgg
      481 tagtcgagtg gcgggactgt tccgcggtcc cattccattt tatcggtggc gagatcccac
      541 ccgcgaaccg actggaccga gacctgaatc agcagccggt agcgctcctc ccgctcttcc
      601 agcgctgcct ccgcggcctt gcgatcggtg atatcctgaa ccgtggtgat gaagtgggcc
      661 ggctgggtct ccgatccagt cgccagagcc acgttgacca gtgcccagac aactcggccc
      721 gacacggtga ggtagcgctt ttccatcgta tagctgcgcg actcaccagc caggagaagc
      781 cggctggctt cgcgatcgga cgcgacatcg tcgggatagg tgcggggttc agcaggaagt
      841 ccgacaagtt cgtcgggaga ggattcgagg aactccgcca gcgcccgatt tactcggagc
      901 catcggccgt ccagggtgat gaggccgacg ccgatcccaa tctgttcgat gccgctgtgc
      961 agttgctcct cggtgtccct ccgccccagc tcggcctgac gacgattggc aatctcctgg
     1021 cgcagctcga tctcggtaat ggccgaagct gcaaggtctt gcagcagggc gatgtcacgc
     1081 tccgaccaca accgcggcat gcggtccacg acacaaaagc tgccaacgac gtgaccgtct
     1141 cgagtgatca ggggaacgcc cgcataggag acccagccga gctcacgaac cgctggactg
     1201 tggcgaagca agggatgccg ccgggcgtcc tcaacgatca gcggctcccc agtactgacc
     1261 acggtcgagc agaaggaaaa tgaaagagga gccacccgct gggacgcgaa tggctcaggc
     1321 aaccctatgg cactcttgaa gaactggcgg tcggcagcga ccagggcgat gagtgaagtg
     1381 gaagccccga gcaggcgcgc ggccattcgg gtgagccgat cgaaaccttc ctcggggggt
     1441 gtatccagga gcgcggtctg ccggagggcg gcgagccggt cggggcgatt gagcagacta
     1501 tgggtcatgt acctggcgcg ccgttttccc tccagcgcag cgcactggag gttccctggg
     1561 tcagtttgcc ggtatggcct gatcgattag tgccccgagg tgccgtttct caacctacat
     1621 ggcaccgggt agtgcgctag aagcgtgcct cggaagccgg ccttgcgaac cggtggatcg
     1681 agtgccttgc caacctcgca gcccgggcta tcttcccgcc gctcaactgg acaagggccc
     1741 cccaatgcgc ctcctccctc gcgacgagaa gtttttcgac ctcttcagcg cggtcgcttc
     1801 cctcagcgtg gaagccgccc ggctgcagct cgacctgctg aaggccgacc aactgcaccg
     1861 cggcccgatc gtggacgcca tcaagcggct ggaacacgag gccgacgaga tcacccacga
     1921 ggtcgtcacc cggttggacc gggtcttcat caccccactg gatcgcgaag acattcactt
     1981 gcttgcatcg cggttggacg atgtggtcga tctgatcgac ggcaccgctc accgggtcaa
     2041 gatgtatcac gcaggtgagg cgcctcccgg ggccctgctg atggctgagg tggttctgcg
     2101 agccacccag gcgcttctca ttgccgtgca gggcctggaa aagaaccggg atcacgtcgt
     2161 gctggacgcg tgcgctcagg taaaacggct ggaggaggag ggggactcgg tgtaccacga
     2221 gtgggtcgcc cgtttgttcg acggctctcc cgacgctctc gtcgtcatca agtggaaaga
     2281 gatctacgat acgctggaaa agacgttgga ccacatggag gacgcgggga acgttctgga
     2341 gtccatctcg atcaagcacg cctgacaatg agccacgaga tcctgtacgt tctggtgatc
     2401 gtggccgtgg ccctcgcctt cgacttcatc aacggttttc acgacagcgc caactccata
     2461 gcaacggtgg tttcgacccg ggtcttgagc ccgggagtcg ccgtgctctg ggccgctttt
     2521 ttcaatttca tggcggcgtt cgtagtgggt accgccgtcg ccaagacgat tggaaagggt
     2581 ctgatcgatc cccaggtaat cgaccccagc gtcgtcctcg gcgcactgct gggcgccatc
     2641 atctgggacc tgatcacctg gtatctcggt ctcccgacct cctcctccca tgctttgctc
     2701 ggtggttttg ccggtgcagc aatcgcaaaa gcggggttcg gggcgctgct cctggcgggc
     2761 tgggtgttac cggtggcgtt catcgtcatc tcgcccctcc tcggcatggc catcgcactg
     2821 ggactcaccg tggggctgtc ctggctgctt cggagttttc gtcccggtcc attggataag
     2881 gcgtttcggc gacttcaact ggtctcagcc ggactctact cgctgagtca cggagccaac
     2941 gacgcccaga agaccatggg catcatcgtg ggtcttctgg tctcagtgaa gcacctgttc
     3001 gtctcccaga ccggttggat gaacttcctc tatgtcccga ccgccgagca cattccactc
     3061 tgggtagaga tgggcgcgta cactgccatt gcctgcggta ccgcgctggg cggatggaga
     3121 atcgtcaaga cgatggggac gcggatcacc aagctgcggc ccttcggcgg cttctgcgcg
     3181 gagacagcgg ggggtattac ggtgctgatc gcttcacggc tgggagtgcc ggtcagcacc
     3241 acacatacca taaccggtgc tatcgtcggg gtgggctcgg ctcagcgggt ctcggcggtg
     3301 cgctggggtg tggcaactcg gattgtctgg gcctggctac tcacgatgcc gatgagtgcg
     3361 gctattgcgg cgctcatgta tctgcttctg agtaagcgga tcggtctcta agctcaggcg
     3421 gctcggacca cgctcctgct ggcaattgct gcctggtagt caccgatcag actgtcgtac
     3481 acctgatccc agctcctctc cgacgccgtc ttgagtccgc cctccgacag cttctgccgg
     3541 agccctggat cgtgcatcag gcgacgaagg ccgtgggtca acgctgaggc actgttcggg
     3601 gcaaccagcc aggcgttgcc cgcgtggcgg gcaaactcca ggactccacc ggccgatgct
     3661 gcgatacagg ggaggccgga gcccatggct tcgagcagtg agttgccgaa cgtctcggtg
     3721 gccgatggaa agacgaagat gtcggcagag gcatacgccg ctgccagctc gcggtcgtgc
     3781 agcagtccga gaacatggac tcccggcaac tcacggcgcc gaatctcctc ctccagcgga
     3841 ccccggccga cgaagaccag gacagcgttc cctcgttcgg cctgaagtgc gttccaggca
     3901 ctcagcagat gcttgagatt cttctctcgg gctatcctgc cgatgtaggt caccagcagg
     3961 tcattgggac cgagtccgag cgaagcccgg taggcatcgc tacgaaatcg ggggtggaac
     4021 tcgtcaggat ccacaccacg gctccagacg ccagtatgga aaacgccgcg actgtgcagg
     4081 tgctgctcgt acagaaagga gggacagagc actcggtggg cctgcccgta aaaccagcgc
     4141 aggtagtgcc accccagccg gagcgcccac tcgacgccgt accgtgcagc gtacttgtcg
     4201 tagtcggtgt gggccgaggc gatgactgga atctttaatt ggcgggccgc tttgagcccg
     4261 ctcaggccga ccgcgaactc ggtcgccaca tgcacgacgt cgggctcgaa ctgctccaga
     4321 tcctggatga tgtcacgcag gcgcgggaag gcccactgga catcgggata tagaaacagg
     4381 ggaacgctgg gagaacgata aacttcgggt cggtcggcct tacctggggg aagaggatag
     4441 gtagcagagt agacccgagc gcctcagagc aatatccccc ggcacccggg tgctgatctt
     4501 gagcatgtat gacaatgcag agtacgtgct gcagagcgtg cgcgccggtg cccacggcta
     4561 tctcctgaaa gacacggccg cgaccgagct tcgcg
//
LOCUS       DASRPQ010001848         4056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3978633, whole genome shotgun sequence.
ACCESSION   DASRPQ010001848 DASRPQ010000000
VERSION     DASRPQ010001848.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4056
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3978633"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..216
                     /locus_tag="VFD73_20985"
     CDS             <1..216
                     /locus_tag="VFD73_20985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76447.1"
                     /translation="EFAHLYPTLTPGEWEPAARIAEVVLARLLLLEISEAPIQDRVLK
                     EEHFEFRGDPPAAAIKPGGSSRAEDRS"
     gene            219..749
                     /locus_tag="VFD73_20990"
     CDS             219..749
                     /locus_tag="VFD73_20990"
                     /inference="COORDINATES: protein motif:HMM:NF009807.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative metal-dependent hydrolase"
                     /protein_id="HZI76448.1"
                     /translation="MEDLRYPIGPFQFSGKPDTHSRTRCIAEIGAAPGHLRAAVSDLT
                     PQQLDTPYRPNGWTVRQVIHHVPDSHLNAYTRCKLALTEPEPTIKPYDEARWAELPDV
                     AATPIETSLTLLECLHRRWVLLLRELRSEDYSRKFKHPELGRTITLNELLELYAWHGR
                     HHVAHITSLRDRMGWS"
     gene            825..1136
                     /locus_tag="VFD73_20995"
     CDS             825..1136
                     /locus_tag="VFD73_20995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family protein"
                     /protein_id="HZI76449.1"
                     /translation="MSNIFMTFAWYAHLRNLGQRPWYIAAVASWGIALFEYMLQVPAN
                     RIGYTALSLSQLKILQEVITLVVFAPFALFYMRQPIRLDYLWAALCMVAAVYFVFRSP
                     A"
     gene            1136..2350
                     /locus_tag="VFD73_21000"
     CDS             1136..2350
                     /locus_tag="VFD73_21000"
                     /inference="COORDINATES: protein motif:HMM:NF015535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P1 family peptidase"
                     /protein_id="HZI76450.1"
                     /translation="MIRWLTLTSLGAALVVVGAPCQTPAVRAQDFGIPLDGIPGRLDA
                     ITDIPGVAVGHTTLISGSGPLQVGIGPVRTGVTVIFPRGPRDLAPVFAGWFSLNGNGE
                     MTGTAWLDDYAQLLYPISITNTNSVGTVRDAIIEWGRPRVPGVFNCCLPVVAETWDGD
                     LNDIYGFHVTKADVFAALAAAKPGAVPEGNVGGGTGMQCLGFKGGIGTASRQLPDSAG
                     GFVVGVLVQCNFGLRQQLRIAGVPVGREVRADQPCYDTTRRLTAEQEPMRCPRLTGPA
                     QEHGSIIVIIGTDAPLLPHQLRRVARRATLGIGRMGGISGASSGDLFLAFSTGKIDAS
                     PDRQGVQPLRMLSDERIDPIYEATVQATEEAIINAMLAAQTMTGADFLRVPAIPHDQL
                     RSILRKYGRLKN"
     gene            complement(2340..3236)
                     /locus_tag="VFD73_21005"
     CDS             complement(2340..3236)
                     /locus_tag="VFD73_21005"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI76451.1"
                     /translation="MPLSSSDRSPTIASVLLPVERARVDAAGSGCFALVHRDSIPDAV
                     RIVRERPVDAVLVSVHRCAPEQVEVLGHLVREFPGIPTVALLSQHDPGATEMLLRLGA
                     SGVRQVVDVTSPTGWSRLRQVVGQPATRAVARIQGPILEALSDAAPDGRLFVEALIRL
                     APDTPTVAHLARRLYVRPSTLMSRFARAGLPSPKNYLAAIRLLHAAYLFETSGLSVAD
                     VAYRLEYSSPQSFGRHLRAMLGLTALEFRRRFPFRLALERFVDLLLTPYLPIWRSFHP
                     VAAGSLAGSMELQPPSARAVSS"
     gene            3408..>4056
                     /locus_tag="VFD73_21010"
     CDS             3408..>4056
                     /locus_tag="VFD73_21010"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI76452.1"
                     /translation="MGDTTVDLFTALQAALGPHYRLERELGRGGMGVVFLALDTTLDR
                     RVAIKVVHPELSPHESIARRFLAEARTIARLRHPNIVAIHAAGSAQGLLYYVMDEVAG
                     ESLRQRLTRDGRLGIDETSRIISDLAAALDVAGRAGVVHRDVKPENVLLDEASGRALL
                     ADFGIARVVAADSGTSSTGQGVAVGTPIYMSPEQAAGEEIDIRSDLYALGVVAYEM"
BASE COUNT          762 a         1262 c         1305 g          727 t
ORIGIN      
        1 gagtttgctc atctgtaccc cacactgacg ccgggggagt gggaaccggc agcgcgaatc
       61 gctgaagtgg tgctggcccg acttctcttg cttgaaattt ccgaggcacc gatccaggat
      121 cgagtcctca aggaagagca cttcgagttc agaggtgatc caccggcggc ggcaatcaaa
      181 ccgggcggga gctcccgcgc cgaggaccga tcctagaaat ggaagatctg cgctatccga
      241 tcggcccgtt tcagttttcc ggaaaaccgg acactcacag tcgcacgcgg tgcattgccg
      301 agatcggcgc cgcgccgggg cacctgcgtg ccgccgtctc ggaccttacg ccgcagcagc
      361 tggacactcc gtatcggcca aatggctgga ccgtccggca agtaatccat cacgtaccgg
      421 acagccacct caacgcgtat acccggtgca agctggcgtt gaccgagccc gagcccacca
      481 tcaaaccgta tgacgaagct cgctgggccg agcttcctga tgtcgcggct acgccgatcg
      541 agacctccct gacgctgctg gagtgcctgc atcgacgatg ggtgctcttg ctcagagaac
      601 tgcgctcgga agattactcc cgcaagttca agcatccgga gctgggccgg accatcaccc
      661 tgaatgagct gttggagctc tatgcgtggc acggccgtca tcacgtggcc cacatcacct
      721 cactgcgaga ccggatgggc tggtcctgac ccggtgagat aacctccaaa aaggagcgac
      781 caattcccgc ctctgttctt tttcgtacca gtttcctgct gctcctgtcg aatatcttca
      841 tgacctttgc ctggtacgcg cacctcagaa atctaggaca gcggccctgg tacatcgccg
      901 cagtggcaag ctggggcata gcgttgttcg agtacatgct gcaggtgccg gccaaccgga
      961 tcgggtacac cgcgctctcg ctctcacagc tgaagattct tcaggaggtc atcaccctgg
     1021 tggtgtttgc accgtttgcg ctgttctaca tgcggcagcc gatccggctg gattacctgt
     1081 gggccgccct ctgcatggtg gctgcggtgt acttcgtatt tcgctcgccc gcctgatgat
     1141 tcgctggctg accttgacca gcctcggcgc tgcgctcgtg gtcgtgggag cgccgtgcca
     1201 aacacctgct gtccgggctc aggatttcgg cattccgctg gacggcattc ccggccggct
     1261 ggacgctatc acggacattc ccggagtagc ggttgggcac accaccctga tcagcgggag
     1321 tggcccgctc caggtgggga tcgggccagt ccgcaccggt gtcaccgtga tattcccccg
     1381 cggaccccga gaccttgcac cagtgttcgc cggctggttc agcctgaacg gcaacggtga
     1441 gatgaccggc acggcatggc tggatgacta tgcccagctg ctctatccca taagcatcac
     1501 caacaccaac agcgttggaa cggtgcgcga cgccattatc gagtggggac gacctcgggt
     1561 cccgggagtg ttcaactgtt gcctgccggt ggtggcggag acctgggacg gcgacttgaa
     1621 tgacatctac ggctttcacg tcaccaaagc cgatgtattc gcggcgctgg ccgcggccaa
     1681 gcccggtgcg gtgccggagg ggaacgtcgg cggaggcacc gggatgcagt gcctcgggtt
     1741 caagggtggg attggcacgg cgagccgaca gctgccggat tcggctggag gctttgtggt
     1801 gggcgttctg gttcagtgca actttggcct gcggcagcag ctccggattg ccggggtgcc
     1861 ggttggccgg gaggtgaggg ccgatcaacc gtgctacgac accactcgcc gactcactgc
     1921 ggagcaagaa ccgatgcgct gtcctcggct gacgggtccg gcacaggagc acggctcgat
     1981 catcgtgatc attggaaccg atgcaccact gctcccgcat caattgcggc gggtggcccg
     2041 gcgagccaca ctgggcatcg gacgaatggg agggatctct ggcgccagct cgggagacct
     2101 cttcctggcc ttctcgaccg gaaaaattga tgcttcgccg gaccgccagg gagtccagcc
     2161 gcttcggatg ctgagtgacg agcgcatcga tccgatttac gaggccactg tgcaggcgac
     2221 cgaagaggcc atcatcaacg ccatgctggc agcacagacg atgaccggcg ccgactttct
     2281 tcgagttccc gcaattccgc acgatcagct tcgcagcatt cttcggaagt acggccgtct
     2341 taagaactga ccgctcgagc cgacggaggt tgcagctcca tgctgccggc caggctgccg
     2401 gcggcgacgg gatggaacga ccgccagatg gggagataag gcgtaagcag cagatcgacg
     2461 aaccgctcga gtgccaggcg gaagggaaac cgtcttcgga attcgagggc agtgaggccc
     2521 agcatggccc gcaggtgcct gccgaagctc tgaggcgaag agtactccag ccggtacgcg
     2581 acatccgcaa cggataggcc ggaggtctcg aacaagtacg ccgcatgcag gaggcggatg
     2641 gcggcaaggt aattcttggg cgagggaagt cccgcccggg caaagcggga catcaacgtg
     2701 ctggggcgca catacagcct gcgggcaagg tgggccaccg taggggtatc tggtgccagc
     2761 ctgattaacg cctccacgaa cagccgaccg tcgggtgccg cgtcggatag cgcctcgagt
     2821 atgggtcctt gaattcgcgc caccgctctg gtggcgggct gccccacgac ttgccggagc
     2881 cggctccagc cagtcggtga ggtgacgtcc acgacttgcc gcacccccga tgcgcccaaa
     2941 cgcagcagca tttcagtagc cccggggtcg tgctgagaaa gcagcgccac ggtgggaatg
     3001 ccgggaaact cgcggacgag gtgtcccaac acttctacct gctccggcgc acagcgatgc
     3061 accgagacca gcacagcatc caccggtcgc tctcggacga tgcgcacggc atcgggaatg
     3121 gaatcccggt gaaccagtgc gaaacagcca cttcctgctg catcgactcg agcccgctcg
     3181 actggaagca gaacggaggc gatggtgggt gatctgtcgg atgagctgag tggcacggag
     3241 cctcccctga ggtcgtgcgg gaggttaccc ctgtaacgtc aactaaggtt aaatctgaaa
     3301 cgggacgaac cctcgcctcg tcggattcaa agtatgcggt actcgctgac ggtacggcct
     3361 ggccactgac cgggtatatt cggatcaacc catcaccggc atctcacgtg ggcgatacga
     3421 ccgtcgatct cttcaccgca ctgcaagcgg cgttggggcc acactatcgg ctggagcgcg
     3481 agctcggccg tggcggcatg ggagttgtgt tcctggccct ggacaccact ctcgaccgac
     3541 gggtcgccat caaagtcgtc catcccgagc tctcccccca cgaatcaata gcccgccgct
     3601 tcctggcgga agcacgaacc atcgcccggc tgcggcaccc caacatcgtc gccatccatg
     3661 cggcgggcag cgcccagggg ttgctctact atgtgatgga cgaggtggcg ggagagagtc
     3721 ttcgccagcg cctcacccgg gacggacggc tgggcatcga cgagaccagc cgaatcatct
     3781 ccgacttggc ggcggctctg gacgtagcgg gccgcgctgg tgtggtgcat cgggacgtga
     3841 agccggaaaa cgtgctgctc gatgaggcca gcggacgggc gcttctcgcg gattttggga
     3901 ttgctcgtgt cgtagccgcc gacagcggca cctcgagtac cggccagggc gtcgcagtgg
     3961 gcaccccgat ctacatgagc ccggagcagg cggccggcga agagatcgac atccggagtg
     4021 atctctacgc gctgggtgtc gtggcgtatg agatgc
//
LOCUS       DASRPQ010001849         1029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3031634, whole genome shotgun sequence.
ACCESSION   DASRPQ010001849 DASRPQ010000000
VERSION     DASRPQ010001849.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3031634"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(241..933)
                     /locus_tag="VFD73_21015"
     CDS             complement(241..933)
                     /locus_tag="VFD73_21015"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI76453.1"
                     /translation="MQCPKSRHEETWFGDRVDPDFAKKGVIEQLYTAPPVGSVVVCLD
                     EMGPQAAKSFPGQQLVKPAAPEAERAKQEIDYGRRGSGYVFGAFQPASGTAFTHPYDR
                     RTTTNDFLGEVEAWIDPAIERIYAITDNLSTHSAPDVLLFSRFHPRWEFVFQPKYAAY
                     LNLIEPWWKVLRSLALKGRWFETWAEIEQAVERATAYWNEHKHPFIWGRRRRHRQSRR
                     LGVAALPPISLI"
BASE COUNT          189 a          309 c          327 g          204 t
ORIGIN      
        1 catcggctcg atgcttttgc gcccacccgg cagcagcaga ccggtgcagt agccgcgcag
       61 cgggccgacc cggtcggcgt ggccgatcac cttcgacact tcagtgacat aggcctggaa
      121 ccggatctca ctgccggcat cgggggaaac agaagaacct tggatcatgc cctcttacat
      181 gggcatagac ccgacttctt taaccttttt tatgacacag tcctattagt ggtgcatccg
      241 ctaaatcagt gagatagggg ggagagccgc cacaccgagc cggcgggatt gccgatggcg
      301 ccgccgacgt ccccagatga agggatgctt gtgctcattc cagtaggcgg tggcgcgttc
      361 aaccgcctgc tcgatctcgg cccaggtctc gaaccagcgg cctttcagag ccagggagcg
      421 gagcaccttc caccatggct cgatcaggtt gaggtaggct gcatacttgg gctggaagac
      481 gaactcccag cgcggatgga accggctgaa cagcagcacg tcgggcgcgc tgtgggtgct
      541 gagattgtcc gttatcgcat agatccgctc gattgcggga tcgatccagg cttcgacctc
      601 gcccaggaag tcgttggttg tcgttcggcg atcatagggg tgagtaaagg ccgtgccgct
      661 ggccggctgg aaggccccga aaacgtagcc gctgccccgc cggccatagt cgatctcctg
      721 tttggcccgt tcggcctcgg gcgcggccgg tttcacgagt tgctggcctg gaaagctctt
      781 agccgcctgt ggccccatct cgtccaggca gacaactacg ctgccgaccg gcggcgcggt
      841 gtagagctgc tcgatgactc cttttttggc gaagtcagga tcaactcgat caccaaacca
      901 ggtttcctca tgccgacttt tcggacattg catacgggta taacttccgg tatggctacc
      961 tgtaagggaa ctcggcccgg gcagcccggc gggacatcgg tgggttgccc ggcggggcag
     1021 gggaaccgg
//
LOCUS       DASRPQ010001850         1043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2122754, whole genome shotgun sequence.
ACCESSION   DASRPQ010001850 DASRPQ010000000
VERSION     DASRPQ010001850.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2122754"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..919)
                     /locus_tag="VFD73_21020"
     CDS             complement(<1..919)
                     /locus_tag="VFD73_21020"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZI76454.1"
                     /translation="MHNSELITPQHLARKAVIYIRQSTPHQVLSHQESLRLQYALHER
                     ARQLGWPAAAIDIIDDDLGLTAASAAHREGFNTLVAQVTLEQVGLIVSYDVTRLSRNC
                     SDWYPLLDLCGYKGCLIADSDGIYDPATVNGRLLLGLKGTLSEWERHTMKARLTAGLL
                     HKAQRGELALTLPTGLVRNGQGQGHKIPNQEAQARLALVFETFVHCRSASKVVEAFKR
                     HALLLPRRDRFGDLVWKAPRVASVLAILKHPAYAGAFTYGRTRTVRREASQRRPSLTR
                     LPQDQWRICILNVYPSYISWEIYTQIQAML"
BASE COUNT          201 a          304 c          353 g          185 t
ORIGIN      
        1 tgagcatggc ctgaatctgc gtgtagatct cccaactgat gtaggacggg tagacgttca
       61 ggatgcagat gcgccactgg tcctggggca ggcgggtgag cgagggacgt ctctggctag
      121 cctcgcggcg gacggtgcgg gtgcggccgt aggtgaaggc acccgcatag gccggatgct
      181 tcagaatcgc cagcacggac gccacccgcg gggccttcca gaccagatcg ccaaaccgat
      241 cccgtcgcgg cagcaacagc gcgtggcgct tgaacgcctc gaccactttg ctggccgagc
      301 ggcagtgcac aaacgtctcg aacaccagcg ccaagcgggc ttgcgcttcc tggttgggaa
      361 tcttgtgccc ctgcccctgc ccgttgcgca ccagccccgt gggcagagtc aaggccaact
      421 ccccgcgctg cgccttgtgg aggaggccgg cagtgaggcg ggctttcatg gtgtgccgtt
      481 cccattccga cagggtgcct ttgagaccga ggaggagccg accgttgacg gtagccggat
      541 catagatgcc atcgctatca gcgatcaagc atcccttata gccacacagg tccaacagcg
      601 gataccagtc tgagcagttg cgggacagcc gcgtcacatc ataggacaca atgagcccca
      661 cctgttcgag ggtgacctga gcgacgaggg tattgaagcc ctcgcggtgc gcggcactag
      721 ccgcggtgag gccgaggtca tcgtcaatga tgtcgatggc tgcagcgggc cagcccaact
      781 gacgggcgcg ctcgtggagc gcgtactgca accgcaggct ctcttgatgg ctcaacacct
      841 gatgcggggt tgattgccgg atgtaaatga cggccttgcg ggccagatgt tggggcgtaa
      901 tcagctcgga gttgtgcatc gatcacctcc tggaagagcg ccgtgaggtc agcgcggata
      961 cgggtgtgcc acgcggggga gagtcgatgc cagagttggg ttgggttgca ggacataaca
     1021 cctcgcattg cgtagcgaaa gaa
//
LOCUS       DASRPQ010001851         1091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4609301, whole genome shotgun sequence.
ACCESSION   DASRPQ010001851 DASRPQ010000000
VERSION     DASRPQ010001851.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4609301"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            277..>1091
                     /locus_tag="VFD73_21025"
     CDS             277..>1091
                     /locus_tag="VFD73_21025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
                     /protein_id="HZI76455.1"
                     /translation="MEIKVQISVNSEAGQPEVIQQVAHLERGALRPDTLGLSLTEARS
                     ILAGLEQALVEQQTAELVAQAQRCPRCGRARACKGHHPIVFRTPFGKLTLDSPRLYRC
                     PCESETRKSFSPLAELLCERASPELLYLETKFAALVSYGLTVELLKEVLPIGQALNTM
                     SLRRQVQQTAGRLEAEIGKGQDIFVEDGPEKGALSSSATPFVAGLDGVYVHAKGQRSR
                     REGWFEVIVGKSLPAEDRPSKCFGFVRRYDPEPKGRFSAWLEGLGLREGQPVT"
BASE COUNT          201 a          344 c          346 g          200 t
ORIGIN      
        1 cctgcaattc gctcccagag cgcgcgccct cgattactcc gcattttgtt caactcggca
       61 tttcggcaaa aatgccgagc tcagcatttt ttccgtttcg tgttgtctcc ccattttctc
      121 tctcgatggt ggacatgcgg cagctacgga tgataaccag cattcaggtc cccggccgga
      181 cgcgttggac agtgagaccg ggacaaaccg ggggcaaaag ggcgactgag gtttcggctc
      241 ctggcttctg ctgcgtcggg ccgtaggggg aacggcatgg agatcaaggt ccaaatcagc
      301 gtgaactcgg aggccggtca accggaggtc atccagcagg tggcgcacct ggaacgcggg
      361 gcattacgac ccgacacgct cgggctctcc ctaaccgaag cgcgctcgat tctcgccggg
      421 ctggaacagg ccctcgtcga gcagcaaacc gccgaactcg tcgcccaggc gcaacgctgc
      481 ccccgctgcg gccgggcgcg cgcctgcaag gggcaccacc cgatcgtgtt ccgcacgccc
      541 tttggcaaac tgacgctcga cagcccgcgc ctctaccgtt gcccgtgcga atccgaaacg
      601 cggaaaagct tcagcccgct ggcggagttg ctctgcgagc gggcctcacc cgagttgctg
      661 tacctggaga ccaagttcgc ggccctggtg tcttacgggc tcaccgtgga gttgttgaag
      721 gaggtgctgc cgatcggcca agcccttaac accatgagcc tgcgacggca ggtgcagcaa
      781 acggccgggc ggctggaagc cgaaatcggc aaagggcagg acatttttgt ggaggatggc
      841 ccggaaaaag gtgctttatc ctcgtcagcc acccccttcg tcgccggact agacggcgtc
      901 tacgtccatg ccaaaggcca gcgctcgcga agggaaggct ggtttgaggt catcgtgggt
      961 aaaagcctgc ccgccgagga tcgaccctcg aagtgcttcg gctttgtgcg ccgttacgac
     1021 cctgagccca aagggcggtt ctcggcgtgg ctcgagggcc tgggcttgcg ggaaggccag
     1081 cccgtcacgt t
//
LOCUS       DASRPQ010001852         1083 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3384761, whole genome shotgun sequence.
ACCESSION   DASRPQ010001852 DASRPQ010000000
VERSION     DASRPQ010001852.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3384761"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(197..272)
                     /locus_tag="VFD73_21030"
     tRNA            complement(197..272)
                     /locus_tag="VFD73_21030"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(237..239),aa:Ala,seq:ggc)
     gene            complement(405..806)
                     /gene="rsfS"
                     /locus_tag="VFD73_21035"
     CDS             complement(405..806)
                     /gene="rsfS"
                     /locus_tag="VFD73_21035"
                     /inference="COORDINATES: protein motif:HMM:TIGR00090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HZI76456.1"
                     /translation="MTASESSVTIARHAAKAAADKIAQNIVALDVSERLALADVFLIA
                     SAPSERQVNAIVDGIEEELIKQDLRPVRREGRSAGRWVLLDYADVVIHVQHEEDRVFY
                     ALERLWKDCPVVDLQLPDDAPATAAAAADQE"
     gene            complement(852..>1083)
                     /locus_tag="VFD73_21040"
     CDS             complement(852..>1083)
                     /locus_tag="VFD73_21040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76457.1"
                     /translation="APPARQDTDWTEESAEDVTALPPVSAKSAYGLEPLDAATAGLAR
                     ANRLRMIQLGVLALGAIALVAGIIMIISGLSR"
BASE COUNT          192 a          335 c          348 g          208 t
ORIGIN      
        1 agatcgtcga catctacgcc ggactcgacg tgctggtgat caactaccgc aaccagcgcg
       61 gaggtctcgt gaacgaggtg ctcatcttcg acggcgacct cgtggtggag gggcacggaa
      121 cctaccgcga cagctccgcc aacctcgcgg gggcgacagt cgaaagcggc cgatgatggg
      181 gacgaacccg attgtttggt ggatctgagg ggactcgaac ccctgacccc ctgcatgcca
      241 tgcaggtgcg ctaccagctg cgccacagcc ccatatcctt gctgcttcgg acctcaggct
      301 tagcctccgg cgtccgttct tttgtccgga tctctccgaa gcaactcaaa tatcttagaa
      361 cagcgtttcc gaaaattcca aatcgggcat attccgatcc gcagctactc ctggtcagcg
      421 gcggcagcgg ccgttgccgg agcgtcgtca gggagctgca ggtccaccac cgggcaatcc
      481 ttccagagcc gttcgagggc gtagaagacc cggtcttcct catgctggac gtggatgacg
      541 acgtccgcgt aatccagcag gacccaccgg ccggctgaac ggccctcccg gcggaccggg
      601 cgcaggtcct gcttgatgag ctcctcttca atgccgtcga cgatggcgtt tacctggcgt
      661 tcgctgggcg cggaggcgat gaggaagacg tctgccaggg ccaggcgttc gctgacgtca
      721 agggcgacga tgttttgggc gatcttgtcc gccgctgcct tggctgcatg ccgggcaatg
      781 gtgacggacg attcagatgc ggtcacggga ctccttgtgg tgatgaaaag ctgaagtggt
      841 tcttgctgaa gtcagcgtga gaggccgctg atgatcatga tgatgccggc cacgagggcg
      901 atggcgccca gcgccaggac gccaagctgg atcatcctca accggttggc gcgtgccagt
      961 ccggccgtgg ctgcatccag cggctccagt ccgtaggctg atttcgccga cacgggcggc
     1021 aacgctgtca cgtcttcagc ggattcctcg gtccagtccg tatcctggcg ggccggcggc
     1081 gca
//
LOCUS       DASRPQ010001853         1050 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3979111, whole genome shotgun sequence.
ACCESSION   DASRPQ010001853 DASRPQ010000000
VERSION     DASRPQ010001853.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3979111"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..469
                     /locus_tag="VFD73_21045"
     CDS             <1..469
                     /locus_tag="VFD73_21045"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZI76458.1"
                     /translation="IWTWAGWLYLATVIDCATRKIVGWAMDDNYKTPLIVEAIQMAAR
                     NLDLPEGAVFHSDRGSNYTSAKFADELKNLGISQSVGRTGICYDNALAESVNGTLKVE
                     LVHRTAYPDREKAREDIARWIELRYNRTRLHSGLGYRTPQEVMDQYLNGQEAA"
     gene            complement(544..747)
                     /locus_tag="VFD73_21050"
     CDS             complement(544..747)
                     /locus_tag="VFD73_21050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76459.1"
                     /translation="MRIKLPAGENQLLEAGGETGRRIGQDLLVRAAGGQQYHGGGDGG
                     AGQRGGIACVRYDGDERRRRDGG"
BASE COUNT          204 a          346 c          310 g          190 t
ORIGIN      
        1 tatctggacc tgggcgggct ggctctacct tgccacggta attgactgcg ctacgcggaa
       61 aatagtcggc tgggcgatgg atgataacta taagacgccg cttatcgtcg aggctatcca
      121 gatggccgcc cggaacctgg atctcccgga aggggctgta ttccacagcg accgcggcag
      181 caactacacg tcggcgaaat tcgcggacga gctgaagaat ctcgggatca gccagtccgt
      241 cggccggacc ggtatctgct atgacaacgc attggctgaa tccgtcaacg gcacgctgaa
      301 agtcgagctg gtccaccgga ccgcttatcc ggaccgggag aaagcacggg aagatattgc
      361 gcggtggatc gagcttcgct ataatcgaac ccgtctccat tcggggctcg gttacaggac
      421 tccgcaagaa gtcatggacc agtacctgaa cgggcaggaa gccgcatgaa ttaatcgcaa
      481 attccctgtc cggaaaacgc ggggcagctc agaacgctcc cgcttgccga ggtcgccgcg
      541 ctgctagccg ccgtcccgcc gacggcgctc gtcaccgtca tagcggacac atgctatgcc
      601 gccgcgctgt ccggccccac cgtccccgcc accgtggtac tgctggccgc ctgcggcgcg
      661 aaccaggaga tcctggccaa tccggcgacc agtttcgccg cccgcctcga gcaactggtt
      721 ctccccggcg ggcagtttaa tccgcactgc accagttacc gctggctcaa ccggcagttc
      781 cgcgaggact cgccggacgt ggaacgcccc cgtgtgtgga ccaaccgcct ctcggcgtgg
      841 tcctggcggc ccttccaccc cgcgagcagg ccgcaacgcc agtccgccgc ggaccggcca
      901 gtgctgttcg gaccaggtct atctcattaa cctccggcat taactcacct ggccatttag
      961 cgacgcttct gcgtctttct agggttttaa gttaaggcac ccggttggag atctggtaca
     1021 tacccaggca catggcggga caacgcgcag
//
LOCUS       DASRPQ010001854         1161 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_223568, whole genome shotgun sequence.
ACCESSION   DASRPQ010001854 DASRPQ010000000
VERSION     DASRPQ010001854.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223568"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..430
                     /locus_tag="VFD73_21055"
     CDS             <1..430
                     /locus_tag="VFD73_21055"
                     /EC_number="5.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HZI76460.1"
                     /translation="TPLVCVGETLAERDGGRTEQVIVRQLAPVLQAIPPDAWAQVLLA
                     YEPVWAIGTGKNATPDDAAQIHELIRMELDRSGVPGRISILYGGSVNKGNVAFLLSRP
                     QIDGVLVGGASLDPTGWADLVDEGSRAKVRPSGGFDIVTG"
     gene            481..>1161
                     /locus_tag="VFD73_21060"
     CDS             481..>1161
                     /locus_tag="VFD73_21060"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HZI76461.1"
                     /translation="MPPTLDDRALLARLIGFDTTSRLSNLALVEFLSDYADRPGIRIL
                     RNPSPDGNKTNLIMMAGPEDTGRNGLVLSGHTDVVPAEEADWRSDPFTLTDRDGCYVG
                     RGAADMKGFLALAVNRLVSRDPAGLRHPLVLLLTYDEEVGTMGARRFTETFPHPERLP
                     RNVVIGEPTGLRVVRAQKGMLRLRLTFTGKAAHSGYPHLGESAIEPAAEGIVVLSKLR
                     RTMERERLP"
BASE COUNT          208 a          369 c          372 g          212 t
ORIGIN      
        1 cacgccgctg gtctgtgtcg gtgagactct ggccgagcgc gatggtggcc ggacagaaca
       61 ggtgatcgtg cgccagctcg cgccggtgct gcaggcaatt ccgccggatg cgtgggccca
      121 agtgctcctg gcatacgagc cggtctgggc catcggcacc ggcaagaatg ccacgcccga
      181 cgatgcggcc cagattcatg agctgatccg aatggagttg gaccgaagtg gtgtcccagg
      241 ccgcatttcg attctctatg gcgggagtgt caacaaaggc aacgtggcgt tcctgctcag
      301 ccggccacag atcgatggtg tgctggtggg tggcgccagt ctcgacccga ccggatgggc
      361 tgatctggtg gacgagggct ctcgggcaaa ggtcagaccc tcgggtggct tcgatattgt
      421 caccgggtag gacaagatcg gccgcagttc gttcgcttcc cctcccacca gctgagcagg
      481 atgccgccca ccctggatga ccgtgcactg ctggcccgcc tcatcgggtt cgacaccacg
      541 agccggctca gtaatctcgc gctggtggaa tttctctccg actacgccga ccggccgggc
      601 attcgcattc ttcgcaatcc gtctcccgac ggaaacaaga ccaacctcat catgatggca
      661 ggcccggagg acaccggccg gaacggtctg gtcctctccg ggcataccga cgtggtaccg
      721 gccgaggaag ccgactggcg ctccgaccct ttcacgctca ccgataggga cggctgctac
      781 gtgggacgcg gagcagccga tatgaagggt ttcctcgcgc tcgccgtcaa ccgactggtg
      841 agtcgggatc ccgccggctt gcggcatccc ctggtactgc ttttgaccta cgatgaggaa
      901 gtcggaacaa tgggagctcg ccggtttacc gagacctttc cccatccgga gcggttgccc
      961 cgcaacgtcg tcatcggtga gcccaccggg cttcgggtgg tgcgggcgca gaagggcatg
     1021 ctgcgtctga gactcacgtt caccggtaag gccgcccact cggggtatcc ccatctcggc
     1081 gagagcgcaa ttgaaccggc agcagagggc attgtcgtcc tcagcaaact ccgccgtact
     1141 atggaaagag aacggctccc c
//
LOCUS       DASRPQ010001855         1043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_841409, whole genome shotgun sequence.
ACCESSION   DASRPQ010001855 DASRPQ010000000
VERSION     DASRPQ010001855.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_841409"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          182 a          321 c          358 g          182 t
ORIGIN      
        1 gaccaggccg gtggcgtcaa tagcggctgt agctgtcatc tcatcgcttc ccttggcgca
       61 acgttcatgc tcaggacgct acggggcagc ggcttcacca cggcaacacg ccggtatcac
      121 gggtttacag ccaggccggg ccgtgctgac agctagcgat tggcggcctg agaggcagtg
      181 cggatatcag ccccgccatc gccgcagtca gcgcgcagtc cggcgccgcg aaccatcgga
      241 ttaccgacac cctcggcagc cagaacgctg gccgaggctc cgatgacgag agagccgaca
      301 acatcaagtc ggcacaacag gagtgaggta ggccagtgcc accggcgctg ggggagaggt
      361 ggatggatat cgcgcggctt cgggcaggca gcatccggtc acgaggattt ctgcggcctg
      421 ttcttgctga tccaggtgcg catcgggacg gggaggggcg gctggcgact gctgcgtcga
      481 ttctgctcag ggcgccccgc acctgaccag aatcgacgct tcgggacggc gtttcaggtt
      541 cgatcacagc ttcgaacgcg cgataataga ctcatggaga gtgcggattc gcgatctagg
      601 ctgccatcgc gttgggcggg agttgaggct aagctgccgc tcgccttgga ccagctcgct
      661 gggccagctg acggcgtggt cgaactgcct ctcgatctgg cctggtcagg ggaccgccgc
      721 ttcgacctcg cggacccagt gcagcgttac ttgtaccaca tgacgcagtg tgttgacctc
      781 tgcagttacg cgggagcact acaccagatg gctgaacgct agcctgctca gcggtgactg
      841 gagcaggctg cgcctgccgc ggccgctccg agagacatgg caggcgcact tcccggaact
      901 gagaccgggt tagtcggtcg gccatgcttg acggcgacca caaggccctg gtggacgcgg
      961 cactgcctgt ctgcgcccag tacgggctgg cggtggccgg cggatatgcg gtcaaggcgc
     1021 acggtctcgt gcaacgtccg tct
//
LOCUS       DASRPQ010001856         1054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_223610, whole genome shotgun sequence.
ACCESSION   DASRPQ010001856 DASRPQ010000000
VERSION     DASRPQ010001856.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223610"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..370
                     /locus_tag="VFD73_21065"
     CDS             <1..370
                     /locus_tag="VFD73_21065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HZI76462.1"
                     /translation="RHVLAIESDNGTFSPNGFRFTGSSAGLAEVQQVGALLSGIRAGT
                     ITRETQSPEADIEPLVDRGVPGMGLDVDRTRYFWYHHSDGDTLDKLDPAELGRCVAAL
                     AVMAYVVADLPDALPRTASR"
     gene            342..>1054
                     /locus_tag="VFD73_21070"
     CDS             342..>1054
                     /locus_tag="VFD73_21070"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI76463.1"
                     /translation="MHSPAQPAGKPQALLERWSIDRNIGAVAGAGLLMSLGEELWKRF
                     LPKYLESSGAPLLAIGAYGSTRDLLDGLAQYPGGWVADRYGRRTGLRVFIALAIAGYL
                     VLAFGRPWPVLFAGIVLVMAWSSMASPAIFAVIGDALPPARRAMGFSVQSILRRVPIA
                     IAPLLGGMLIASQGTRGGVKTGLMVTIVLALATEVLVSRLRVALPAAAGAVSMRGVWR
                     SLPGSLRELLVSDILVRIC"
BASE COUNT          143 a          338 c          370 g          203 t
ORIGIN      
        1 gcggcacgtg ctcgcgatcg agtcggacaa cgggacgttc agtccgaacg ggttccgctt
       61 caccggatcg agtgccggtc tcgctgaggt tcagcaggtg ggagccctgc tcagcgggat
      121 ccgggcgggc accatcacca gagagaccca gtcacccgaa gccgacatcg agccgctggt
      181 ggaccggggt gttccgggaa tgggtctgga tgtcgatcgc actcgctact tctggtatca
      241 ccacagcgac ggtgatacgc tggacaaact ggatcccgcc gagctgggcc gctgcgtcgc
      301 cgcgttggcg gtgatggcgt acgtcgttgc cgacttgccg gatgcactcc cccgcacagc
      361 cagccggtaa gccacaggct ctcctcgagc gctggagcat cgaccgaaac atcggcgcgg
      421 tggccggcgc cggattgttg atgtcgctgg gagaggagct gtggaagcgg tttctgccca
      481 agtacctcga gagcagcggg gcgccgctcc tggccattgg cgcgtacggc agcacccggg
      541 atctgctgga cggcctggca cagtaccccg ggggttgggt ggccgatcgc tatggccggc
      601 gaaccgggct ccgggtcttt atcgccctgg ccatcgccgg ctatctggtg ctcgcgttcg
      661 gccggccgtg gccggtgctc tttgccggaa tcgtgctggt catggcgtgg tccagcatgg
      721 cgagcccggc catcttcgcc gtcatcggcg atgccctgcc accagctcgg cgggcgatgg
      781 gcttctcggt gcagtcgatt ctccgccgag ttcccattgc cattgcgccg ctcttgggcg
      841 gaatgctgat cgcgagccag ggcacccggg gtggagtgaa aaccggtctc atggtgacga
      901 tcgtgcttgc gctcgccacc gaggtgctgg tctctcggct ccgggttgct ctgcccgcgg
      961 ccgccggcgc tgtcagcatg cgtggtgtgt ggcggtcgct tcccggctca ctccgggagc
     1021 tcctggtctc cgatatcctg gtccggatct gcga
//
LOCUS       DASRPQ010001857         1441 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4283167, whole genome shotgun sequence.
ACCESSION   DASRPQ010001857 DASRPQ010000000
VERSION     DASRPQ010001857.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4283167"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            239..1087
                     /gene="cpaB"
                     /locus_tag="VFD73_21075"
     CDS             239..1087
                     /gene="cpaB"
                     /locus_tag="VFD73_21075"
                     /inference="COORDINATES: protein motif:HMM:TIGR03177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HZI76464.1"
                     /translation="MRKRRPWFMLLLALTSGVVAALLALRYLRERTTPLMAAEPKRAN
                     IVLTARSLPVGAVLTERDLKVVSWPGDAVPSGYIRSIPDAVGRGLITPVAENEPLLAS
                     KVSTKDAGGGLPIIIKDGMRAVSVRVDEVIGVAGFVLPGTRVDVLLTLDKGPDRPESI
                     TKTLLQNVQTLAAGQSVTRDKEGKPQTVTVITVLVSPDDAELLALAAKEGRLQLALRN
                     TLDTMPVATSGARADKLTPSASGRTPNRPQRAARPAPTPRENPTVVEGYKGGERTLTT
                     FQKPDR"
     gene            1123..>1441
                     /locus_tag="VFD73_21080"
     CDS             1123..>1441
                     /locus_tag="VFD73_21080"
                     /inference="COORDINATES: protein motif:HMM:NF025014.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein N-terminal
                     domain-containing protein"
                     /protein_id="HZI76465.1"
                     /translation="MLNLRHCRTGSSFTAWQWCIAGVLTSAALLTAAGSAEAQRVVRA
                     PEQVVSVSKGASALLVNTTVIQRFSIGDPTVAEAVVVSPTEILINGKSLGTTSLFLWD
                     NTGA"
BASE COUNT          287 a          452 c          439 g          263 t
ORIGIN      
        1 cccgattagc gattgctatc accagccggc aggctacggc agagagatga cggtgactgt
       61 caccaccccg taccggatgg gcttggttca cgtcctcatg cgctgggccg gtgtaccggg
      121 cacggtgacg atcggcaaca acgccaccat gcggaacgag tagcaagagc gttactgaaa
      181 cgatcaccgg accggacatc tttggcgcct ggtgtcactg agttaagcga gtgccttcat
      241 gagaaaaaga cggccctggt tcatgctcct cctggctctc acctcagggg tggtggcggc
      301 gctcctggcg ttgcgatacc tccgagagcg taccacaccg ctgatggcgg cggagcccaa
      361 gcgagcaaat atcgtgttga ctgcgcgcag tcttccggtg ggagcagtgc tcaccgagcg
      421 tgacctgaag gttgtcagct ggcccggcga tgcagtcccg agtggatata ttcgctcgat
      481 tcctgacgcc gttggccgag gcctcatcac tccagtggcg gaaaacgagc cgcttctcgc
      541 ctccaaggtt tccaccaagg atgccggggg cggcctgccg atcatcatca aggacggcat
      601 gcgcgccgtc agtgtacgag tcgacgaggt catcggggtt gccggattcg tccttcccgg
      661 caccagagtg gatgttctgc tgaccttgga taaagggcca gaccgtcctg aatcgattac
      721 gaagacgtta ctacagaacg tgcagacgct cgcagcaggg cagtcggtga cccgggataa
      781 ggaggggaaa cctcaaacag tcacggtcat taccgtgttg gtgtctcccg atgatgccga
      841 actgcttgcc ttggctgcaa aggaggggcg ccttcaactg gcgctgcgca acaccctcga
      901 caccatgcca gtggctacca gcggggctcg agccgacaag cttacgccca gcgcgtcagg
      961 ccgcaccccg aatcgccctc aaagagcggc ccggccggct ccgacaccaa gagaaaaccc
     1021 gacggtggtt gagggctaca agggcggcga gcgcacattg acgacctttc agaaacctga
     1081 ccgttagacc agagaccctg accctacagc cctggaaaat tcgtgcttaa cctccgccac
     1141 tgtcggaccg gttcgtcttt cacagcctgg cagtggtgca tcgccggcgt cctgacttcc
     1201 gcggctctcc tcaccgccgc cggctcggcc gaggctcagc gggtggtccg ggcaccggag
     1261 caggtcgtct cagtgtccaa gggtgcatcc gccctcctgg tgaataccac cgtcatccag
     1321 cggttctcca tcggcgatcc cacggttgcc gaagctgtcg tggtatcgcc gaccgaaatc
     1381 ctgatcaatg gcaagagcct gggcacgacg agcctctttc tgtgggacaa caccggggca
     1441 a
//
LOCUS       DASRPQ010001858         2205 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1149852, whole genome shotgun sequence.
ACCESSION   DASRPQ010001858 DASRPQ010000000
VERSION     DASRPQ010001858.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1149852"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(438..1883)
                     /locus_tag="VFD73_21085"
     CDS             complement(438..1883)
                     /locus_tag="VFD73_21085"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase"
                     /protein_id="HZI76466.1"
                     /translation="MRYSLALFALAPLTLGPFILNAQSDSAARPNILVLLADDLGWRD
                     TGVYGNPDVGTPNIDRLTRSGLKVTFAFGTSPQCSPSRISMLSGKFSHATRTEDLHTP
                     LPDSVRILPSYLQELGYFTGMMAKSHLGPNGDRQFQWYSPKLAEVFPAFLDSAGTRQF
                     FLWVGFHWPHRPYQRTGVPHPHSPSRVKVTPYLVDTPETRADIARYYNAIARMDDEIG
                     RMLAELDRRKLREKTLVMFLSDNGAPFPREKGTLYDSGTRTPLVFSWSPIIRPGTEFD
                     RGVLSTVDLAPTLLEVAGGTPPATMQGRSFRNLLTQPNSFSAPTYAFSERNWHDCDEH
                     QRAVRTMRFKLIRTDAYLELPLCTAADLGASPSFLSLRQRAKTGRLTPAQARLFEAPR
                     ARLELYDLQKDPWEIRNVADDPAYAGQVRKLAAVLEQWIEQSDDFPATYRIRDDNTDR
                     ITGVQFTSKIPPLRNAEVPPASERWGRQGPT"
     gene            1998..>2205
                     /locus_tag="VFD73_21090"
     CDS             1998..>2205
                     /locus_tag="VFD73_21090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76467.1"
                     /translation="MTAQAGRFHPTPRLTARDLVQRTVVALALCVFVWRAYQSYLVSP
                     RLSLLLLLLSETLTVVLVVLARPPE"
BASE COUNT          370 a          675 c          763 g          397 t
ORIGIN      
        1 cctcacggag cgggtgaggt actggggttc acctctctac gatgagctcc aagtgcagtt
       61 tcagaaccaa acaccggggt gtttggccgg ggggacgttc tgtcctccgg gcgcccacgc
      121 agcagctccg ctcgcgccac agcgtacgag gtagagaggc agctgctgac gcgcccttca
      181 gttgcgcagc ttgtcgacgt gagcgagcac ttgctgggta gcggcggggg acgcccttcc
      241 gcgtgccacg caaccgctac gctggcgctg ctgagttccg agacctgctg gcggttgctg
      301 cgcgcgcttc agggcgtacc cccgccgcga gtcagcgcgc gtgctctggc acggatagta
      361 gcggaagggg aggtctcagg ttccgccgtt cctcacgttc ctcacgttcc gccgttccgc
      421 cgttcctcac gccgccctta cgtcggtccc tgccgccccc aacgctcgct cgccggcgga
      481 acctccgcat tcctgagcgg cgggatcttg ctggtgaact gcaccccggt gatgcgatcg
      541 gtgttgtcgt cccggatgcg atacgtcgcg ggaaagtcgt ccgactgctc gatccactgc
      601 tccagtaccg ccgcgagctt ccgcacctgt cccgcgtagg cgggatcgtc ggccacgttg
      661 cgaatctccc acggatcctt ctgcagatcg tacagctcga gccgggcgcg cggcgcctcg
      721 aacagccgag cctgtgcagg cgtgagtcgg cccgttttgg ctcgctgccg gagggacagg
      781 aacgacggac tggcgccgag atcggccgcg gtacacaaag ggagctcgag gtaggcgtcg
      841 gtccggatca gcttgaagcg catcgtgcgc accgcccgct ggtgctcgtc gcagtcgtgc
      901 cagttgcgct cgctgaacgc gtaggtaggg gcggagaagg agttaggctg agtcaggaga
      961 ttccggaaac tgcgtccctg catcgtcgcc ggcggcgtcc caccggcgac ttccaggaga
     1021 gtcggggcga gatcgacggt gctgagtacg ccacgatcga attccgtgcc cgggcgaatt
     1081 atcggtgacc aggaaaagac cagcggtgtg cgggtgccgg aatcgtagag cgtgcctttc
     1141 tcccggggaa acggagcgcc gttgtcgctc agaaacatta ccagcgtctt ctccctgagc
     1201 ttccggcggt ccagctccgc cagcattcgg ccgatctcgt cgtccatgcg cgcaatggcg
     1261 ttgtaatagc gggcgatgtc ggcccgggtc tccggcgtat caacgagata tggcgtgacc
     1321 ttcacccgtg acggcgagtg ggggtgcggc actccagtcc gttggtaggg acggtggggc
     1381 cagtggaagc ccacccagag aaagaactgg cgggttcccg ccgaatccag gaaggcgggg
     1441 aacacctcgg ccagcttggg cgagtaccac tgaaactggc gatcgccgtt gggcccgaga
     1501 tgactcttgg ccatcatccc ggtgaagtaa cccagctcct gcaggtacga ggggagaatc
     1561 cggacactgt ccggcagggg ggtgtgcaag tcctcggtgc gagtggcgtg ggaaaacttc
     1621 ccgctgagca tgctgatccg ggagggactg cactggggac tggtgccgaa cgcgaaggtg
     1681 accttgagtc cggaccgggt gagccggtcg atgttgggcg tccccacatc cggattgccg
     1741 tagacgccgg tatcgcgcca gccgagatcg tcggccagga ggaccagaat attggggcga
     1801 gcagcggaat cgctctgcgc attcagtatg aagggtccga gggtgagcgg agcgagcgcg
     1861 aagagagcga gagagtagcg cacgacggag gttcctctca gcttggagcg gtaggagcgg
     1921 aaaagcggta agggcggtag ctaaccacat ttcgggaagg ttgggcgaag cagagctcaa
     1981 atgccagcgt attccacatg accgctcagg cgggccgatt ccatcctacc ccccgactga
     2041 ccgcgcgcga tctggtgcag cgtacggtgg ttgcgctggc gctctgcgtc ttcgtctggc
     2101 gagcctacca gagctacctg gtgtcgcctc ggctctctct cctgctgctg ctcctctccg
     2161 agacgttgac ggtggtcctg gtggtcctgg cgcggccgcc ggaag
//
LOCUS       DASRPQ010001859         2998 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3032292, whole genome shotgun sequence.
ACCESSION   DASRPQ010001859 DASRPQ010000000
VERSION     DASRPQ010001859.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2998
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3032292"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..695)
                     /locus_tag="VFD73_21095"
     CDS             complement(<1..695)
                     /locus_tag="VFD73_21095"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HZI76468.1"
                     /translation="MIPRRKLGNDAPPVTAVGYGGMHLSIQDRPPEEQGIRVIQAALD
                     AGVTFIDTADVYCLDDSEIGHNERLIARALSSRSTRDGIIVGTKGGLRRPGGRWELDG
                     RPSHLRSACERSLIALGIERIDLYQLHSPDPKVRFADSVGALADLQREGKVRWLGLSN
                     VSVAEIREAERIATITSVQNRLNPFFREALAEGVVQYCEDRGIGFLAYSPIGGGRLNR
                     QLPAHPVLRPMATR"
     gene            complement(692..1414)
                     /locus_tag="VFD73_21100"
     CDS             complement(692..1414)
                     /locus_tag="VFD73_21100"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HZI76469.1"
                     /translation="MSVPAGDGLILKGTLTYPGENAGTSFPLVVLAHQYPATRDSYSP
                     LVSDLVQSGAATLAFDERGHGASILSPSGITVIDAPVGLGLEAFGTAFVSSISKVGFS
                     RIDDDILRVVSWGANQNFIDPARMALVGASIGGSGVLLALGNLPGLRAVATLGAAGAP
                     AFGADGPSRVRQTLERVTVPCFLASSRDDPFDGGANVTAWSQDLSHVTGRLVAGSAHA
                     MAIYFEVRDELLRFLQRALALR"
     gene            complement(1432..1704)
                     /locus_tag="VFD73_21105"
     CDS             complement(1432..1704)
                     /locus_tag="VFD73_21105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76470.1"
                     /translation="MTADQQGGALKPVTPARVAEELKKLSSQRKEGKLAPDEYEHRFS
                     RMITELRERRIDGSRAEIMATLVPLKDQGIVSMADWARLTKQLGLA"
     gene            complement(1750..2328)
                     /locus_tag="VFD73_21110"
     CDS             complement(1750..2328)
                     /locus_tag="VFD73_21110"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI76471.1"
                     /translation="MNYSHSYIPESDIPRTTPIFQHLVDTYASETNKLASVWSELRDH
                     QLEFRPHTRSSSIRQILVHQILSERRFFAEFLGLAEPEPDVLLPPGSQPSVTAYVERV
                     VGLARSRLVPLAAGDERFWLTEVPFFDVRRQRIWVFWRRVLHTAHHRAQVGVCLRLLE
                     DRVPATYGPTADVTWSGADPTTTLDAARRAQP"
     gene            complement(2434..>2998)
                     /locus_tag="VFD73_21115"
     CDS             complement(2434..>2998)
                     /locus_tag="VFD73_21115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator SirA"
                     /protein_id="HZI76472.1"
                     /translation="RRQKRSRPEVLRGSTRRVETPLGTLYVTITEDDRGQPFEVFMTL
                     GKAGGALMADVESLGRLISLALRSGIPIKEIYRQLRGISSDRVIGLGPNKILSVPDAV
                     GIAIERWMQEKQGIQQELLPGRSTAQPDLAPLVSQPSSQVTSSGEQMIFGGMQEMLSG
                     ACPDCGSQLEFAEGCMKCHVCGFSECG"
BASE COUNT          561 a          930 c          969 g          538 t
ORIGIN      
        1 cgcgtggcca taggtcggag caccgggtgc gctggaagct gccggttcag cctcccgccg
       61 ccaatgggac tgtacgccag aaagccgatg ccccggtcct cgcagtattg aaccaccccc
      121 tcagccaggg cctcccggaa aaagggattc agacgattct ggacgctggt aatggtcgcg
      181 atccgttctg cctcacggat ttccgcaacc gagacgttgg agaggccgag ccatcggacc
      241 ttgccctcgc gctggagatc ggccaaggca cctacgctgt ctgcgaaacg caccttggga
      301 tcgggggagt ggagctggta cagatcaatg cgttcgatgc cgagggctat gagcgatcgt
      361 tcgcaggctg agcgcaggtg actgggtcgg ccgtcgagct cccagcggcc gcctggacgc
      421 cgcagccctc ctttggtccc tacaatgatg ccatctcggg ttgatcgtga gctcagagct
      481 cgggcgatca gccgttcgtt gtgaccgatc tcgctgtcat cgaggcagta cacgtccgcg
      541 gtgtcgatga aggtcacgcc ggcatcgaga gcagcctgaa tgacccggat gccctgttcc
      601 tcaggggggc gatcctgaat agagaggtgc atgccaccat agcccactgc tgtcactggt
      661 ggcgcatcgt tgccgagctt gcgacgagga atcaccgcaa ggcgagagcg cgttggagaa
      721 atcgaagcag ctcgtcccgg acctcgaagt aaatggccat ggcgtgggcc gagcctgcca
      781 cgaggcggcc ggtgacgtga gacaagtcct ggctccaggc agtgacgttg gcacctccat
      841 cgaagggatc gtctcgcgac gacgcgagaa agcagggaac tgtgacccgc tccagggttt
      901 ggcggacccg gctgggccca tcggcaccga aggccggagc tccggcagcg cccagggtgg
      961 ccaccgcacg caacccgggc aggttgccca gcgccagcaa cacgccgctg cccccgatgc
     1021 tggctccgac cagcgccata cgggcgggat cgatgaagtt ttggttggca ccccaggaga
     1081 cgaccctgag gatgtcatca tcgatgcgac taaatccgac cttgctgatg ctgctgacga
     1141 aggcggtgcc aaacgcctcg aggccgagac cgaccggcgc gtcgatcacg gtgatgccgc
     1201 tgggtgacag gatggaggcg ccgtgtcctc gttcatcgaa cgccagggtg gccgctccac
     1261 tctgcactag atcacttacc aatggcgagt agctgtctcg agtcgccggg tattggtggg
     1321 cgagcacgac aaggggaaac gatgtgcccg cattctcgcc gggatacgtg agcgttcctt
     1381 tgaggatcag accatccccc gccggaacgg acatctccaa cggggcgagg gtcacgccaa
     1441 tccgagctgc ttggtgagcc gcgcccaatc ggccatcgaa acgattccct gatccttgag
     1501 cggaacgagg gtcgccatga tttcggcccg gctgccatca atgcgccgct cgcgcaactc
     1561 ggtgatcatc cgggagaagc ggtgttcgta ctcatccggc gcgagcttac cctccttccg
     1621 ctgactactg agctttttca gctcctccgc aacgcgggcg ggcgttacgg gctttagtgc
     1681 accaccctgc tggtcagccg tcatgagatc ctctcccgaa tgcgtaaacg agaaacctgc
     1741 ccttctccat tatggctgtg cccggcgcgc ggcgtccaga gtggtcgttg gatcggctcc
     1801 gctccacgtg acgtcagcgg tgggtccata agtcgccggc acccgatctt cgagcagccg
     1861 aaggcagacc ccgacctggg ctcggtgatg tgccgtatgg aggacccgcc gccagaaaac
     1921 ccagattcgc tgacgacgca cgtcaaagaa cggcacttcg gtcagccaga atcgctcgtc
     1981 gccggcggca agcgggacga gacgagaccg cgccagaccg acgactcgtt ctacgtacgc
     2041 tgtgaccgac ggttggcttc cgggtggcag tagtacatcg ggttccggct cggccagccc
     2101 gagaaattca gcaaagaatc ttcgttccga gaggatctga tgaaccagga tttgccggat
     2161 cgagctgctt cgagtgtgcg ggcggaactc gagctggtga tcgcgaagct cgctccacac
     2221 cgaagccagc ttgttggtct ccgaggcgta ggtgtccacg aggtgctgga aaatgggggt
     2281 ggtccgggga atgtcgctct cggggatata tgaatgggaa taattcatgg cgtactgctt
     2341 ggaggtggac ggtccagaga gagcaacgcc cgccggcctt gcggtcgacg ggcgctggtg
     2401 tgtaacggcc tggctacttg cgggcgacca cgatcacccg cactcgctga agccgcacac
     2461 gtgacacttc atacagcctt ccgcaaattc cagctgcgac ccgcagtccg ggcacgcacc
     2521 ggacagcatt tcctgcatgc ctccgaagat catctgttcg ccggagcttg tcacctgact
     2581 cgaaggctga gagaccaggg gagccaggtc gggctgggcg gttgaccggc cgggaagcag
     2641 ctcctgctga atcccctgct tctcctgcat ccagcgctcg atagcgattc caacggcgtc
     2701 ggggaccgac aggatcttgt tgggacccag gccgattacc cggtcggagc tgattccgcg
     2761 gagctggcgg taaatctcct tgatgggaat gccgcttcgg agcgcgaggc tgatgagccg
     2821 tcccagtgac tccacgtcgg ccatcagcgc accgccggct ttgcccaagg tcatgaagac
     2881 ctcgaaaggc tgcccgcggt cgtcctcggt gatggtgacg tagagcgtac cgaggggagt
     2941 ctcgacccgg cgggtacttc cccggagcac ctccggccgg gaccgctttt gccggcgt
//
LOCUS       DASRPQ010001860         2441 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2123500, whole genome shotgun sequence.
ACCESSION   DASRPQ010001860 DASRPQ010000000
VERSION     DASRPQ010001860.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2123500"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1844
                     /gene="thrS"
                     /locus_tag="VFD73_21120"
     CDS             <1..1844
                     /gene="thrS"
                     /locus_tag="VFD73_21120"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HZI76473.1"
                     /translation="ARAAIAARVNGEIWDLDRPLETDASVSILTERDPEALEVLRHSS
                     AHILATAVRELFPNAGIGFGPPIEDGFYYDFQVDRPFTPEDLARLEAKMAEVAARDFP
                     FVREVVDRSEANRRFADDPLKLERIAELGDDETITVYTDGPFVDLCRGPHIPRTGRLK
                     HFKLLNAAGAYWRGDEKRQMLQRIYGTAWFKKEDLDAYLHRLEEARRRDHRVLGKQLD
                     LFSIQEVVGPGLVFWHPKGAIIKWLLSRAVEDDNVRSGYQLVYTPNITREELFRISGH
                     LPLYEANQYPPMAAGHEEAEDVRYRVKPMNCPMHALIYKSQQRSYRDLPIRLSEVANV
                     YRNERSGVLHGLLRVRGLSMDDAHIFCTMDQVEDEIFLCLDQVDRLVRQTFGFELDFE
                     VSTRPLERLGDDAIWDRAEAMLKRALERKGIPYRVDEGGGAFYGPKIDIKFRDAIGRL
                     WQGPTIQLDFNLPERFELEYTGPDNKPHRPAMIHRAIYGTLERFIGNLIEHFAGAFPV
                     WLAPEQVRVIPISDAQTEAARSLAERLKSAGLRVHVDDRSETLNYRIREGEMQKVPYM
                     AVLGQREVESDSLALRVRGAGKKQEVMTVNAFLERIQQEVRSRSMVP"
     gene            2140..>2441
                     /locus_tag="VFD73_21125"
     CDS             2140..>2441
                     /locus_tag="VFD73_21125"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF012336.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HZI76474.1"
                     /translation="MSDSTTPVILSAVRTPIGRYLGGLSSFTAPQLGAMVIREAVSRA
                     RIDANEIDSVIMGQVVQGGSGQAPARQAQIHAGLSPAIPAVTINMVCGSGLKAVMLA"
BASE COUNT          456 a          780 c          763 g          442 t
ORIGIN      
        1 tggcccgcgc ggctattgcg gcccgggtca atggcgagat ctgggatctc gaccggccgc
       61 tcgagaccga tgcttcggtg tccatcctta cggagcgcga ccccgaagca ctggaggtgc
      121 tccgtcactc ctcggctcac attctggcca ccgcggtgcg cgagttgttt cccaatgcgg
      181 gcatcggctt tggtcccccg atcgaggacg ggttctacta cgacttccaa gtcgaccgtc
      241 ccttcacccc cgaggacctg gcacggctcg aggccaagat ggccgaggtg gcggcgcggg
      301 actttccctt tgtgcgcgaa gtggtggatc gcagcgaggc caatcgccgt tttgccgatg
      361 atccgctcaa gctcgagcgg atcgccgagc tgggtgacga cgagacgatc accgtgtata
      421 ccgacgggcc attcgtcgat ctctgccgcg gccctcacat tcctcgcacc gggcggctca
      481 agcacttcaa gctgctgaat gcggccgggg cctattggcg gggcgacgag aagcggcaga
      541 tgctccagcg catctacggc accgcctggt tcaagaagga agacctcgac gcctacctgc
      601 accggctgga agaggcccgc cggcgcgacc atcgcgtgct gggaaagcag ctggacctct
      661 tctcgatcca ggaggtggtc ggcccgggac tggtgttctg gcatcccaag ggcgccatca
      721 tcaagtggct gctgagccgg gcggtcgagg acgacaacgt ccgaagcgga taccagctgg
      781 tgtatacccc gaacatcacc cgggaggagc tgttccgaat ctccggacac ctgccactct
      841 acgaagccaa tcagtatccc ccgatggcag cggggcacga ggaagcggaa gacgtgcggt
      901 atcgggtcaa gccgatgaac tgtccgatgc acgcgctcat ctataagagc cagcagcgca
      961 gctatcgcga cctgccgatc cggctctcag aggtcgccaa cgtttatcgc aacgagcgat
     1021 ccggcgtgct gcacggcctg cttcgagtgc gcggactgtc gatggacgat gcgcacatct
     1081 tctgcaccat ggaccaggtg gaggacgaga tctttctctg tctggatcag gtggaccggc
     1141 tggtgcgtca gacatttggc ttcgagctcg acttcgaggt gtccacccgt ccactggagc
     1201 gcctgggcga cgacgccatc tgggaccggg ccgaggccat gctcaagcgc gcactcgagc
     1261 ggaagggaat cccctatcgg gtggacgagg gcggcggagc gttctacggt cccaagatcg
     1321 acatcaagtt ccgtgacgcc atcggccggc tatggcaggg gcccaccatt cagctcgact
     1381 tcaacctgcc ggagcgtttc gagctggagt acaccgggcc ggacaacaag ccgcaccggc
     1441 cggccatgat tcaccgggcc atctatggga cgctggagcg gttcatcggc aacctgatcg
     1501 aacactttgc gggggcattc cccgtctggc tggcgccgga acaggttcgg gtcatcccga
     1561 tctccgatgc acagacggag gccgctcggt cgctggccga acgtctgaaa tcggccggtc
     1621 tccgggtgca tgtcgacgat cgaagcgaga cgctcaacta ccggattcgc gaaggcgaga
     1681 tgcagaaggt gccctacatg gcggtactgg gccaacgcga ggtcgagtcg gacagcttgg
     1741 cgctccgggt tcgcggtgcc ggcaaaaagc aggaggtcat gacggtgaat gccttcctag
     1801 aacgaatcca gcaggaggtt cgcagccgga gcatggttcc ctagttgtgc gcctgaacct
     1861 cggaagtgcc tgtagctcag tccctacccc gtgcaggtgg gatgggcttg ggccatcggg
     1921 aggctcccac catcctcaca cttcatccca aagccaccct cggacccatg cccatcccac
     1981 ctgctccgcc caccgctaat caaatcgcga gttcgaacac tgagagcttt gggacatcat
     2041 ctggaacacc gcgagcactg tagcggtttc agctaaggtg acaaactccc gtttccggca
     2101 tagttttgcc cctgcgaacc cgaaccggat cagtaccacg tgagcgatag cacgaccccc
     2161 gtcattcttt ccgccgtccg cacgcccatt ggccgctatc tcggtggcct ctcttccttt
     2221 actgcaccgc aactcggcgc catggtcatc cgcgaggcgg tctcgcgagc gcgaatcgat
     2281 gccaacgaga tcgattcggt gatcatggga caggtggtgc agggaggatc ggggcaggct
     2341 ccggcccgtc aggctcagat ccacgcggga ctctctcccg ccattccagc ggtcacgatc
     2401 aacatggtct gtggctccgg cctcaaggca gtgatgctgg c
//
LOCUS       DASRPQ010001861         1287 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4610099, whole genome shotgun sequence.
ACCESSION   DASRPQ010001861 DASRPQ010000000
VERSION     DASRPQ010001861.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4610099"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            228..575
                     /locus_tag="VFD73_21130"
     CDS             228..575
                     /locus_tag="VFD73_21130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76475.1"
                     /translation="MSQSQPQGRSYWVDHIEAWRASGMSRAEYCQIHGLSRKTFGWWT
                     WRLDQERRASSAREAPRFVPVELTEQDSPNRDPADPADERIEIALPGGMAVRVGSGFD
                     AAALHRVLRVLGR"
     gene            572..925
                     /gene="tnpB"
                     /locus_tag="VFD73_21135"
     CDS             572..925
                     /gene="tnpB"
                     /locus_tag="VFD73_21135"
                     /inference="COORDINATES: protein motif:HMM:NF017528.4"
                     /note="TnpB, as the term is used for proteins encoded by
                     IS66 family insertion elements, is considered an accessory
                     protein, since TnpC, encoded by a neighboring gene, is a
                     DDE family transposase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HZI76476.1"
                     /translation="MIAVPAGVRVLVWSSPVDFRKGIDGLSAYVQLTLEADVFAGDLF
                     VFRSRRSDRIKVLTYDGTGLCLYQKRLERGRFRWPPVTEGVVRLSAAQMAALIEGLEW
                     SRLQPRAVPRPQIAC"
     gene            1174..1287
                     /locus_tag="VFD73_21140"
                     /pseudo
     CDS             1174..1287
                     /locus_tag="VFD73_21140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011053360.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          235 a          379 c          436 g          237 t
ORIGIN      
        1 gcagaccatg gcccacgcct ttgccgatcg ggccgagccc gcgacggcgc tccgcccgcg
       61 tccggaaggt gagttcgctg gtgtcctgga tcgccagaac gtgacgcccc gcgctcgccg
      121 ccaccgtcgg ctcgctccag cgtaagcgtc gccagagcaa catctggaaa attcagtaat
      181 aagctcgcat tatccgttgc gtacacgaag aggcgacgga gcttgtcatg tcccaatcac
      241 agcctcaagg acgctcatac tgggtggatc atatcgaggc ttggcgtgcg agcgggatga
      301 gccgggcgga atattgccag atacatggac tgtcccggaa gacctttggc tggtggacgt
      361 ggcggctgga tcaggagcga cgggcgtcgt cggccaggga ggcgccgcgc tttgtgccgg
      421 tagaactcac cgaacaggac tcgccaaacc gggacccggc cgatccggct gatgagcgga
      481 tcgagatcgc cctgccgggt ggcatggccg tgcgggttgg cagcgggttc gatgccgcgg
      541 cgctgcaccg ggtcctgagg gtgctcgggc gatgatcgcg gtgccggccg gcgtgcgggt
      601 tctggtgtgg tcgagcccgg ttgatttcag aaaaggcatc gatggtctct ctgcatacgt
      661 gcagttgact ctggaggccg atgtatttgc tggtgatctg tttgtcttcc gctcgcgccg
      721 gtcagaccgg atcaaggttc tgacgtatga cggcaccggg ctgtgcctgt accagaagcg
      781 gctggaacgg gggcggttcc gctggccgcc ggtcaccgag ggcgtggtcc gcctgagtgc
      841 agcccagatg gccgccctga tcgaaggtct ggagtggtcg cggctgcagc cccgcgccgt
      901 gccccggccg cagatcgcct gctgacaaac aaagatctgg catttcaggg cgatgtttcg
      961 tagaatttct gtatgcctgc cgatattgaa ccgccagaac caacaaacga gcaccttcgt
     1021 gttcagcccg atggttgttc ctcgccggcg actgcgaata atgtgacgat agagactttg
     1081 caagccgagc gtgaccactt caggacagcg tatgagcagg ggaatgccga gcacgcggcg
     1141 ctgctgaatg agcgcgatac tctgaaggct gaactggaaa agctgcagct ggcgatcaag
     1201 cagctgatcc gcgcccggta cggccgcaag tccgagcgcc tcgaccccga gcagctccag
     1261 ctcgccctgg aagggctcga gcaggat
//
LOCUS       DASRPQ010001862         1628 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_525742, whole genome shotgun sequence.
ACCESSION   DASRPQ010001862 DASRPQ010000000
VERSION     DASRPQ010001862.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_525742"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VFD73_21145"
     CDS             complement(<1..214)
                     /locus_tag="VFD73_21145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76477.1"
                     /translation="MTQISENQSGTRSRGRALVSGIAGAAVLTSLHEVARRVVPHAPR
                     MDVIGERALSDSMKAAGMRPPRGNQLF"
     gene            complement(386..>1628)
                     /locus_tag="VFD73_21150"
     CDS             complement(386..>1628)
                     /locus_tag="VFD73_21150"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HZI76478.1"
                     /translation="LDWGSFFAAAGLARSPWFVVWQPSAVTGTSALAASEPLDTWKDY
                     LTFHAIQARAAVLPTAFGRESFTFYGAVLSGAKKQRDRWNRAVNATNDALGFAVGKVY
                     AARYFPPAEKARAQKMVTNLIAAFRERIDHLEWMAPATKKQAKAKLAVLKVGVGYPDK
                     WPGYSGLRIVRGDAYGNLARSGLYEYQRALRRLSQPVDRDEWVMTPQTVNAVNLPAMN
                     ALNFPAAILQSPFFDAKRPIAMDYGAIGAIMGHEVSHSFDNQGALFDARGRLHNWWTP
                     ADFKHFQASAQQLVAQYNGYRPFPDLAVNGQQTLGENIADVAGLAASYDAFHRSLSGK
                     SAPVVEDLTGDQQFFISFAQEWRTKARNPVVRNQILTDGHAPAQYRASTVRNLDPWYA
                     AFDVKPGDKLYLAPTERVRVW"
BASE COUNT          306 a          516 c          500 g          306 t
ORIGIN      
        1 ggaaaagttg gttgcctctt ggtggacgca tccctgccgc cttcatgctg tcgctgagcg
       61 cccgctcgcc aatgacatcc attcgtgggg catgagggac gacgcgacgc gcgacctcgt
      121 gcaggctggt caataccgct gctccagcaa tcccactgac gagggcgcga ccccgagacc
      181 gagtgccgga ctggttttcg gaaatttggg tcatcggaac tcctcaataa ctgtccagag
      241 cctcaagcta gagggccagg ctttctccgc gctctgaccg gcgtcacagc ggtagctcgg
      301 agcgattatc tggactactt agagtaccgg atcatcagcg cctcgtcagc cgccgaacgt
      361 gccagaaacc gcccgcccgc ctggcctacc agacccgtac ccgctccgtc ggcgcgaggt
      421 acagcttgtc tccgggcttc acgtcgaatg cagcgtacca gggatcgagg tttctcacag
      481 tggacgctcg atactgggcc ggcgcatgac catcagtgag gatctggttc cgcaccaccg
      541 gattccgagc cttggtacgc cactcctgcg caaagctgat gaaaaattgc tggtcaccgg
      601 tcaagtcttc caccacgggc gccgatttgc cgctgagcga gcgatggaac gcatcgtagg
      661 aggcggcaag cccggcaaca tcggcgatgt tctctcccag cgtttgttgg ccgttcaccg
      721 ccaggtcggg aaacggccgg tacccattgt attgggcgac cagctgctga gcagatgcct
      781 ggaagtgttt gaaatctgcc ggcgtccacc agttgtgcag acgacccctg gcgtcgaaga
      841 gcgcaccctg gttgtcgaag ctgtgactca cctcgtgccc catgatcgcg ccaattgcgc
      901 catagtccat ggcaatcgga cgcttggcgt cgaagaaagg tgactgcagg atggcggcag
      961 ggaaattgag tgcattcatc gcgggcaagt tcaccgcgtt cactgtctgc ggcgtcatca
     1021 cccactcatc ccggtctacc ggctgggaca gacggcggag cgcgcgctga tactcgtaga
     1081 gcccggagcg cgcgagattt ccgtaggcgt cacccctgac gattcgaagc cccgaatagc
     1141 cgggccactt gtctgggtat cccacgccga ccttgagaac cgcgagtttg gctttggcct
     1201 gcttcttggt ggccggagcc atccactcga ggtgatcgat gcgctcgcga aaagcggcga
     1261 tcaggttggt caccatcttt tgcgcccggg ccttttcagc cggagggaaa taccgggccg
     1321 cgtacacctt ccccacggca aacccaagcg cgtcgttcgt ggcgttgacc gcacggttcc
     1381 agcggtcccg ctgctttttc gcgccgctca ggaccgcacc atagaaggtg aatgattccc
     1441 gcccgaaggc tgtgggaagc acagccgcgc gggcctggat agcgtggaag gtgagataat
     1501 ccttccaggt gtcgagcggc tcgcttgccg ccagcgccga agtaccggtg actgcgctgg
     1561 gctgccagac cacaaaccag ggcgaccggg ccaggcccgc ggccgcaaag aagctgcccc
     1621 agtcgagt
//
LOCUS       DASRPQ010001863         1649 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1489646, whole genome shotgun sequence.
ACCESSION   DASRPQ010001863 DASRPQ010000000
VERSION     DASRPQ010001863.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1489646"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..287)
                     /locus_tag="VFD73_21155"
     CDS             complement(<1..287)
                     /locus_tag="VFD73_21155"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZI76479.1"
                     /translation="MKNRIWSRSSYDVVVVGSGPNGLAAAIALSRGGLAVLLVEGEKT
                     PGGGARTTELTLPGFQHDVCSAVHPLAVASLFFRDLMLERFGLEWIHSPAPL"
     regulatory      352..441
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
     gene            445..894
                     /locus_tag="VFD73_21160"
     CDS             445..894
                     /locus_tag="VFD73_21160"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI76480.1"
                     /translation="MSGFDIRPAVPRDHGQMLALWERSVRPTHAFLTEHDIQTLRPQV
                     EQAFANDALDWWVICNESDEPVGFLGYTPGVVEGLFIDPAYHRRGLGARLLAHAQQLA
                     GGPLRVEVNEGNPGAVQFYEKHGFEEVGRSPTDAEGRPFPLIHMRRS"
     gene            complement(891..1559)
                     /locus_tag="VFD73_21165"
     CDS             complement(891..1559)
                     /locus_tag="VFD73_21165"
                     /inference="COORDINATES: protein motif:HMM:NF025687.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4386 domain-containing protein"
                     /protein_id="HZI76481.1"
                     /translation="MTRRRSARIAGITYLFYSAIGICSEVLMHRATAAEGDAAKLARI
                     GEHAMDVRLTIVIVLLESFCALVLAVTLYGITRDQDHELATLGLACRVSEGVLGTLSI
                     PGYLGLLWLARTGVEAHGPDVATTNALRSYLLMPGPSVPIGAIFFAVGSTIFSYLLLR
                     GRMVPVSIAWLGVLASGLLAVTLPLQLAGFLTGPLTGYYQWAPALVFQIALALWLLIK
                     GVAD"
BASE COUNT          338 a          546 c          503 g          262 t
ORIGIN      
        1 agaggcgcgg gcgagtggat ccactcgagc ccaaagcgct cgagcatcaa atcgcggaag
       61 aacagcgacg ccacagcgag cggatggacc gccgagcaga cgtcgtgttg gaacccgggc
      121 agcgtcagct ctgtggtccg cgcaccgccg ccaggagtct tctctccctc caccaggagc
      181 acggccagcc ccccgcgcga gagcgcaatc gccgcggcca acccgttggg ccccgagccc
      241 acgaccacca catcgtagct cgagcgtgac cagatccggt tcttcatctg agctcagtta
      301 tatccttgac ggactcggca ccgatcagta agtactcgca gtctcagtca caatggaaaa
      361 gggcacaccc cggcggaagc cggggtcgca aagccacggg tcccccgctc aaaggcgcga
      421 gctacgaccg cctcttccgc ctgaatgagt ggcttcgata tccggccggc ggtccctcgg
      481 gatcacgggc agatgcttgc cctgtgggaa cggtcggtcc gtcccaccca tgctttcctc
      541 acggaacacg acatccagac tcttcgtcct caggtggaac aagcattcgc caatgatgca
      601 ctggactggt gggtgatctg caacgagagc gacgagcctg ttggctttct gggttatacc
      661 cccggcgtag ttgaggggct gttcatcgat cccgcgtatc accgccgtgg tcttggagca
      721 cggctattgg cccatgcgca gcagctcgcg ggcgggccgc tccgagtgga ggtgaacgaa
      781 ggcaaccccg gcgccgtcca gttctacgag aaacatgggt ttgaggaggt cggccggtca
      841 ccgaccgacg ccgagggtcg gccgtttccc ctgatccaca tgcggcgctc ttagtcagcg
      901 acacccttga tcaggagcca aagcgccagc gcaatctgga ataccagcgc cggtgcccac
      961 tggtagtaac ccgtgagagg gccggttaaa aaaccggcga gctggagcgg caacgtcacc
     1021 gcgagcagtc ccgacgccaa caccccgagc catgcgatgg agactggcac catccgcccc
     1081 cgcagcagga gataagaaaa gatcgtactc cccacggcaa agaagatcgc gcctatcgga
     1141 acgctcggcc ccggcatcag gagatagctg cgaagcgcgt tcgtcgtggc gacgtcgggt
     1201 ccatgcgctt ccacgcccgt tcttgccagc cacaagagac ccaggtagcc cggaatactg
     1261 agcgtaccca aaactccttc ggatacgcga cacgcgaggc cgagagtcgc cagctcatga
     1321 tcctggtcgc gggtgatccc gtacagcgtc acagccagca ccagcgcgca gaacgattcg
     1381 agcagcacga tcacgatcgt gagccgcacg tccatcgcgt gctcaccgat gcgcgcgagc
     1441 ttggcggcat ctccctcggc ggcggtggcg cgatgcatca gcacctcgct gcagatcccg
     1501 atcgccgaat agaagaggta ggtgattcca gcgattcgag cgctcctgcg gcgggtcatc
     1561 tcagcacccc cagcgctccc ttggctcccg atgtgtacag agtgacaatc aggacgacgt
     1621 cggccgcgaa gacggtgagg ttgctggca
//
LOCUS       DASRPQ010001864         2802 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_842227, whole genome shotgun sequence.
ACCESSION   DASRPQ010001864 DASRPQ010000000
VERSION     DASRPQ010001864.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2802
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_842227"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..576
                     /locus_tag="VFD73_21170"
     CDS             <1..576
                     /locus_tag="VFD73_21170"
                     /inference="COORDINATES: protein motif:HMM:NF025616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4349 domain-containing protein"
                     /protein_id="HZI76482.1"
                     /translation="QRVGGFVADATVQSGRNQLRSATLQLKVPSARFDDLTLALGPLG
                     RLQSVTVNAEDVSEEYVDVTARVANSRRLEDRLVELLRTRTGKLQDVLAVEHELARVR
                     EEIERMEGRLRFLKASAQLSTLSVSLSEPPPLGSSHPGRSVIGEAFKTAWRNFVDLLA
                     AVIASLGLVVPLGILGWGSWLVTKRYRRRPA"
     gene            642..1358
                     /gene="bshB1"
                     /locus_tag="VFD73_21175"
     CDS             642..1358
                     /gene="bshB1"
                     /locus_tag="VFD73_21175"
                     /inference="COORDINATES: protein motif:HMM:TIGR04001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis deacetylase BshB1"
                     /protein_id="HZI76483.1"
                     /translation="MTVDILAIAAHRDDVELTCAGTLLKAVDAGYTVGILDLTAGETG
                     TRGSASLRAEEAERAARLLGVTERRNLGLPDAHLQNSEESRRVVVEQIRYFAPRVVIL
                     PFPIGRHPDHRIASELGRDASFLAGLQRYSAEGTAHRPHKLLYALSYREDPVKPTFVV
                     DISAQFERKLAAIKCYGSQFDGAKAAGEIFPTGQDLYALVETQNAHYGSLIRKRYGEP
                     FFTHETMEVDDVVTLGVRSI"
     gene            1396..2577
                     /locus_tag="VFD73_21180"
     CDS             1396..2577
                     /locus_tag="VFD73_21180"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HZI76484.1"
                     /translation="MPAPVYLDHAATTPVRSEVLEAMMPYLTDQTFGNPSSAHRFGRA
                     ARAGIEQARRQIAEALGAEPSQVIFTSGGTEADNLSIVGAVLAARDRGAPMCAAVSAI
                     EHKAVIAAAHAVCHLGGREILLSVDRQGLVELDALDEALADKPAIVSVMWVNNEVGTV
                     QPVGDIAARCQDAGVVFHTDAVQAVGKVPVVVKELRCTLLTLSGHKIGAPKGIGALIV
                     RDRKAIEAILHGGGQQFGIRPGTENVAGAVALGRAVQLAVSEQPATAERLAKLRNHLV
                     SRLKAVVPDIAINAHASPRAPHLLSVAIAGADSEALLMHFDLAGVAVSSGSACSTGAV
                     EPSHVLVAMGVPRELALGTIRFSLGRDTSAADIERAIEVVPGVVEKVRRLAGVLGRTA
                     S"
     gene            2574..>2802
                     /locus_tag="VFD73_21185"
     CDS             2574..>2802
                     /locus_tag="VFD73_21185"
                     /inference="COORDINATES: protein motif:HMM:NF015042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76485.1"
                     /translation="MTARVLVAMSGGVDSSVAAARLVEQGYDVVGATMKLFCYGDEVP
                     DRPCCSLDSINDARDVAAALQIPHYVLNLEDR"
BASE COUNT          505 a          867 c          924 g          506 t
ORIGIN      
        1 cagcgggtcg gcggattcgt tgccgatgcc acagtccaaa gcggacgcaa tcaactccgc
       61 tcagcgacgc ttcagctcaa ggtgccgtca gcccggttcg atgatctgac cctcgccctc
      121 gggccactgg gccgcctgca atcagtcacc gtcaacgccg aagatgtgag cgaagagtat
      181 gtggacgtca ccgcgcgggt ggccaacagc cgtcggctgg aagaccgcct ggtggagctc
      241 ctgcgcaccc gaaccggaaa gctgcaagac gtccttgcgg tcgagcacga gctggcgaga
      301 gtccgggagg aaatcgagcg catggagggg cgtttacgct ttctgaaagc gagcgcccag
      361 ctcagcacgc tgtcggtcag cctgtcggag ccgccaccac tcgggtcctc gcatccgggc
      421 cggagcgtca ttggagaggc gttcaagacc gcctggcgca actttgtgga cctgctcgcc
      481 gcggtgattg cttccctcgg actagtggta ccgctcggca tcctgggatg ggggagctgg
      541 ctggtcacca aacgatatcg aaggagaccg gcgtagacgg taagaggtga gtggtgaggg
      601 cttacctctt acctcttacc tcttacttct taccttgtag catgaccgtc gacatcctgg
      661 ctatcgccgc tcaccgcgac gatgtcgagc tcacctgtgc cggaacgctg ctgaaggcgg
      721 tcgacgcagg atataccgtg gggattctcg acctcaccgc cggtgaaacc ggcacccgcg
      781 gaagcgcatc gctccgcgca gaggaagcag aacgggctgc gcgcctgctc ggggtgacag
      841 aacggaggaa cctggggctg cccgatgccc acctgcagaa ttccgaggaa tcgcggaggg
      901 tggtagtcga gcagatccgc tacttcgccc cacgggtggt cattcttccc ttccccattg
      961 ggcggcaccc ggaccatcgg attgcgtcgg agctgggccg ggacgccagc tttcttgcgg
     1021 gactgcaacg gtattctgcc gaagggacgg cccatcgtcc ccacaaactc ttgtatgcgc
     1081 tgtcctaccg ggaggacccg gtcaaaccaa cctttgtggt agacatcagc gcgcagttcg
     1141 agcgcaaact ggctgccatc aagtgctacg ggagccaatt cgatggcgcc aaggcggccg
     1201 gggaaatctt ccccacgggc caggacctct acgctttggt ggaaacgcag aacgcccact
     1261 acgggtcgct catccggaaa cgctacggcg agccgttctt cacccacgag accatggaag
     1321 tcgatgatgt ggtgacgctc ggcgttcgca gcatctgaag aagcgcaatc ggacccggcc
     1381 atctatcttc agataatgcc tgctcctgtc tatctcgacc acgccgccac caccccggtt
     1441 cgctccgagg tgctggaggc gatgatgccg tatctcaccg atcagacgtt cggcaatccc
     1501 tccagtgcgc accgctttgg ccgggcggct cgggcgggaa ttgagcaggc tcggcggcag
     1561 atcgccgaag cgctcggcgc cgagccgagc caggtgattt ttacgtcggg agggacagag
     1621 gcggacaatc tcagcattgt cggcgctgtc cttgccgcgc gagaccgcgg cgctcctatg
     1681 tgcgctgccg tttccgccat cgagcacaag gccgtcatcg ccgccgccca cgccgtttgt
     1741 catctgggtg gccgggaaat cctgctctcg gtcgatcggc aggggctggt ggagctggac
     1801 gcgctggacg aagcgctggc agacaagccg gcgatcgtct cggtgatgtg ggtgaacaat
     1861 gaggtcggca ccgtgcaacc cgtgggggac atcgctgccc gctgccagga cgcgggcgtg
     1921 gtcttccata cggacgccgt ccaagccgtg ggcaaagtac cggtcgtggt gaaggagctc
     1981 cgctgtacgc tacttaccct gtcaggacac aagattggcg cgccgaaggg aatcggagcg
     2041 ctcatcgtcc gcgatcgaaa ggctatcgaa gcgatccttc atggcggcgg ccagcagttc
     2101 gggatccgcc cagggaccga aaacgtggcc ggcgcggttg ccctcggccg tgcagtgcag
     2161 cttgccgtct ccgagcagcc ggcaactgca gagcgcctag cgaagctccg aaatcacctg
     2221 gtgagccgtc tcaaggccgt cgttcccgac attgcgatca atgcccatgc aagcccccgg
     2281 gcgccccatc tgctgagtgt agcaatcgca ggagcagaca gcgaggcgct gctaatgcac
     2341 ttcgatttgg cgggtgtcgc ggtctcgagt ggatccgcct gttccaccgg agcggtcgag
     2401 ccgtctcacg tgttggtggc tatgggagtg ccgcgggagc ttgctctggg aacgattcgc
     2461 ttcagtctcg gccgcgacac cagcgcggcg gacatcgagc gagcgataga ggtggtgccg
     2521 ggagtggtgg aaaaggtgcg ccggctggct ggagtgctgg ggagaacggc gtcgtgaccg
     2581 cgcgagtact cgtcgccatg tccggcgggg tggacagctc ggtggctgct gctcgtttgg
     2641 tcgagcaggg gtacgacgtc gtgggtgcca cgatgaagct cttctgctac ggcgatgaag
     2701 tccccgatcg accctgctgt tcgctggact cgatcaatga tgcccgtgat gtcgccgccg
     2761 ccctgcagat accccactac gtgctgaacc tggaggaccg ct
//
LOCUS       DASRPQ010001865         1784 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2124200, whole genome shotgun sequence.
ACCESSION   DASRPQ010001865 DASRPQ010000000
VERSION     DASRPQ010001865.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2124200"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1784)
                     /locus_tag="VFD73_21190"
     CDS             complement(<1..>1784)
                     /locus_tag="VFD73_21190"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HZI76486.1"
                     /translation="GIILDRNPRTPVSTSRQRAELIEASKALIAGLDLLARQRFVAVE
                     FVREDGKGIKVFGKLSRRPRLTARDSSDLVLGLPLISVAHAPGSSARVYLLRRLVRSG
                     EIRGTFIAEVSPEYLWGGVQESVPSPTTKVAVLDESAHLLFSSAKAALPLLPSQGLAI
                     ATLDTAVARSAEFYLTATSTIPLDVAFSAQPWSVLFTESKDEVLEPMVEFTNTFLEVV
                     GISSLIVLLLSLSQIRRSVLPLEELQKGTRRIAQRDFSSRVTVTSRDEFEQLASSFNT
                     MAIQLDRQFNALATAAEIDRAVLSATDATAIVDTVLGRIRDVFPCSVVSVTLGVPDGM
                     KSVASVIQDYDKWGRHVERISLRPGDVQGLLTGPDVLELRNESTVPTYLGPLKALGAT
                     SFIVLPLSYQRQLSGIIALGDRVDLVPSEDDRVQMRRLADQAAVALANARMLEQVREL
                     AYYDSLTGLPNRLSYKERLAYALEQASREQRLVAAFFIDLDHFSRINDTLGHEMGDQL
                     LRHVASRLRSCCREREDEVGPAMETLAPEVARLGGDEFTIIMPGLHDAQDAGKLARRI
                     LSSFAQPVRMGTHEIFINASIGIAIYPY"
BASE COUNT          333 a          565 c          562 g          324 t
ORIGIN      
        1 cgtagggata gatcgcgatt ccgatgctgg cgttgatgaa gatctcgtgg gtgcccatcc
       61 ggaccggctg cgcgaagctc gacagaattc ggcgggccag ctttcccgcg tcctgagcgt
      121 cgtgcagacc gggcatgatg atggtgaact cgtcgccgcc gagacgagcg acttccgggg
      181 ccaatgtctc cattgccggt ccaacttcat cctcccgctc tcggcagcag gaacggagcc
      241 gcgacgctac gtgccgcagc aactgatctc ccatctcgtg gcccagcgtg tcgttgatgc
      301 ggctgaagtg gtcgagatcg ataaagaagg ccgcgaccag ccgctgctcc ctgctggcct
      361 gttccagggc atacgccagg cgctctttat aggagagccg gttgggcagt ccggtcagac
      421 tgtcgtaata ggccagctcg cggacctgct ccagcatgcg ggcattcgcc agagcgaccg
      481 ccgcctgatc ggccaggcga cgcatctgca cccgatcatc ttccgacggc accaggtcaa
      541 cccggtcgcc cagcgcgatg atgcccgaca gctgccgctg ataggagagc ggcagcacga
      601 tgaacgaggt tgctcccagt gccttcagcg gcccgagata ggttggcaca gtcgactcgt
      661 tgcggagctc cagcacgtcg ggcccagtta agagcccttg cacgtcgccg ggccgtaacg
      721 agatccgctc cacgtgccgt ccccacttgt cgtagtcctg gatcacgctg gccaccgact
      781 tcatgccgtc gggtactccg agcgtcacac tcaccacgct gcaggggaac acatcccgaa
      841 ttcggcccag cacggtgtcg acgatcgctg tggcgtcggt ggcggagagg actgcccgat
      901 cgatctccgc cgctgtcgcg agggcgttga attgccggtc gagctgaatg gccatggtgt
      961 tgaaggacga ggcaagctgc tcgaattcgt cgcggctggt gacggtgact cggctgctga
     1021 aatcccgctg cgcaatccgg cgagtcccct tttgcagttc ctccagcgga agcacgctgc
     1081 gtcggatctg gctgaggctc agcaggagca cgatcaggct ggagatgccg acgacctcga
     1141 gaaaggtgtt ggtaaactcc accatcggct cgagaacttc gtctttcgac tcagtgaaca
     1201 gcactgacca gggctgggcc gagaacgcca catccaacgg aatggtcgag gttgcagtca
     1261 ggtaaaactc ggccgatcgg gccacagcgg tatccagcgt cgcgatcgct aagccctgcg
     1321 atggcagcaa cggcagagct gccttggcgg agctgaagag caggtgggcc gactcgtcca
     1381 ggacagccac tttcgtggtt ggtgatggca cactttcctg gacacctccc cacaggtact
     1441 cgggactgac ttcggcaatg aacgtccccc ggatctcgcc gctgcggacc agcctccgca
     1501 agagatacac gcgcgccgac gagcctggtg cgtgggccac cgagatcagc ggcagcccga
     1561 ggaccagatc ggagctgtcg cgagccgtga gacggggacg ccgcgagagc ttaccgaaca
     1621 ccttgattcc tttgccgtct tccctgacga actcgactgc cacgaatcgc tgacgggcca
     1681 gaagatcgag cccggcgatc agcgccttgc ttgcctcgat gagctctgcc cgttgtcttg
     1741 acgtgctgac tggcgtccgt gggttgcgat ccagaatgat tcca
//
LOCUS       DASRPQ010001866         2704 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_224477, whole genome shotgun sequence.
ACCESSION   DASRPQ010001866 DASRPQ010000000
VERSION     DASRPQ010001866.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2704
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224477"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1641
                     /gene="aroF"
                     /locus_tag="VFD73_21195"
     CDS             <1..1641
                     /gene="aroF"
                     /locus_tag="VFD73_21195"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF006421.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HZI76487.1"
                     /translation="LVREGEADAGCLPIENSLIGSVTTTYDLLQEAFGDGALRLTHEI
                     LHPVHHTIMALPGAQLSGIQRVLSHPVALGQCRIWLSQHLPNAELVSAWDTAGSAEIV
                     AQEKNLSLAAIAARPAADAHGLRPLAERIEDDPTNQTRFLTFTRAQSSVVGRQPSEGG
                     RYKTSLIVLVDHKPGMLALTLQAFGARGVNLMALQSRPERSAPWTYRFYVDVEGAADD
                     PRVAEALEEIEALAAKLIILGSYEAWTEGSRLAPPVPPPAHRVEKPAIPLVDRRRHPE
                     GSIVAVRHVRFGGESPVLIAGPCSVESEAMILETAAAVASAGGDMLRGGAYKPRTSPY
                     DFQGLGVRGLRYLADARKQTGLPVVTEVLSWEEVPLVAQFADMLQIGARNMQNFSLLR
                     AASRSGMPILLKRGAGATIEEWLMAAEYVLAEGNPNVVLCERGIRTFERATRHTLDLN
                     AVALVRERTHLPVIVDPSHAAGVRSLVPPLSAAALAAGADGLIVEVHPDPSNAVSDGA
                     QSLDFAMFAELAALVHPKGKRGSGAAGDRGSGLAVMQR"
     gene            complement(1735..2001)
                     /locus_tag="VFD73_21200"
     CDS             complement(1735..2001)
                     /locus_tag="VFD73_21200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HZI76488.1"
                     /translation="MGFLWTLIIGLVVGAIAKLIMPGRDPGGIIVTMLIGVAGALLAG
                     FLGRALGWYTNPGEGPGIIASIIGALVLLFLYRLFTGRRGTTVP"
     gene            complement(2084..>2704)
                     /locus_tag="VFD73_21205"
     CDS             complement(2084..>2704)
                     /locus_tag="VFD73_21205"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HZI76489.1"
                     /translation="QSGDIITSVDGKTVLAGGSAEGANQRESVPGLRLIELAAKLAPN
                     DTVPIEFRRGNDRKTVSVVTADEPDILFQGGPGDRSFAFRFGPNGPRRMVMPFEDEMG
                     GQFGGGYLYGSLLADLELAPLNPDLGHYFGASEGVLVISVPKNSELGLKGGDVVLAVD
                     GRKPATPSQLLRILRSYERNESMKLDVLRDHKRETITGKLGDKAER"
BASE COUNT          495 a          882 c          883 g          444 t
ORIGIN      
        1 ctggtgcggg aaggtgaagc cgacgccggc tgcctgccaa tcgagaactc gctcatcggc
       61 tcggtgacca cgacctacga tctgctgcag gaagcgttcg gggacggcgc gctccggttg
      121 acgcacgaga tcctccaccc ggtgcaccac acgatcatgg cgcttcccgg tgcccagctg
      181 tcggggatcc agcgggtgct gtcccatccg gtggccttgg gccaatgccg catctggctg
      241 tcgcaacacc tgcccaacgc cgaactcgtg agtgcctggg acaccgccgg cagcgccgag
      301 atcgtggcgc aggagaagaa cctctcgctg gcggcgatcg cggcaagacc ggcggccgat
      361 gcccacggtc tcaggcctct ggccgaacga atcgaagacg atcccaccaa ccagacccgg
      421 ttcctgacgt tcactcgggc ccagtcgtca gtcgtcggcc gacaaccgtc agagggtggg
      481 cggtacaaga cctcgctgat cgtgctggtg gaccacaaac ccggaatgct ggcgctgacg
      541 ctgcaggcgt tcggtgcccg cggcgtcaac ctgatggcgc tccagtctcg gccggagcga
      601 tcggcgccct ggacctatcg cttttacgtc gacgtggaag gcgccgccga cgacccgcgg
      661 gtggccgaag cactggaaga gatcgaagcg ttggcggcga agctcatcat tctgggaagc
      721 tacgaggcct ggaccgaggg gtcccgcctg gcgcccccgg ttcctccgcc ggcgcaccgg
      781 gtggagaagc cggcgatccc gctggtcgac cggcggcgtc atccggaggg aagcatcgtg
      841 gcggtacgcc acgtccggtt cggcggtgag tcgccggtac tgatcgcagg gccgtgctcg
      901 gtcgaaagcg aggcgatgat tctggagacc gcggcagccg tagcctcggc cggcggtgac
      961 atgctccggg gaggagccta caagccgcga acgtcgccct acgatttcca gggtttggga
     1021 gtgcgcggtc ttcgctacct ggccgacgcg cggaagcaga ccgggctgcc ggtggtgacc
     1081 gaggttctga gctgggagga agttcctctg gtcgcccaat tcgcggatat gctgcagatc
     1141 ggcgcccgca acatgcagaa ctttagtctg ctccgggccg caagtcggag cggcatgcct
     1201 atcctgctca aacgcggcgc cggagccacc atcgaggagt ggctgatggc tgccgagtac
     1261 gtcctggcgg agggcaaccc caacgtcgtg ctctgcgagc gggggatccg gacattcgaa
     1321 cgggccaccc ggcacaccct cgacctcaac gcggtggcgc tggttcggga acggacccat
     1381 ctcccggtca tcgtggatcc gagccacgcc gctggggttc gttcgctggt gccgccgctc
     1441 agtgccgccg cgctcgcggc cggggccgac ggactgatcg tcgaggtgca ccccgatccg
     1501 tcgaacgcgg tgagtgacgg cgcccagagc ctggactttg ccatgtttgc ggagttagcc
     1561 gcgctggttc acccaaaggg gaagcggggc agcggagccg cgggggatcg cggcagcggc
     1621 cttgcggtca tgcaaagata agacgaaaga ccaagaaaaa gcgtaagcgg cgagcggggc
     1681 acttcagaga gcatcccgct taccgcttac gctcttctac tagctaccgt ggctttacgg
     1741 aactgtggtg cctctgcgcc ctgtgaaaag gcgatacagg aacagcagaa ccaacgcgcc
     1801 gatgatggac gcgatgatgc ctgggccttc acccggattg gtgtaccatc cgagtgcccg
     1861 ccccagaaat cccgccaaga gcgcgcccgc cacgccgatg agcatcgtca cgatgatccc
     1921 acccggatcc cgtccgggca tgatgagctt ggcaatggcg cctacaacca atccgatgat
     1981 caaggtccac aggaatccca tagttccctc caaggtggac cgaagatata cgagacccct
     2041 gccgtggcat ctgtgagcag gcgcacactg gattccgggg ggtctagcgt tccgccttat
     2101 cccccagctt tcccgtgatg gtctcccgct tgtggtcacg caacacatcc agcttcatgc
     2161 tctcgttgcg ctcataactg cggaggatcc tcaacagctg cgagggggta gcgggcttcc
     2221 gcccgtcgac cgccagcacc acgtccccgc ccttgagacc gagctccgag ttcttgggaa
     2281 cgctgatgac cagtaccccc tccgaggccc cgaaatagtg gcccagatcg gggttcagag
     2341 gggcaagctc cagatcggcc agcagcgagc cgtacaggta ccccccgcca aactggcctc
     2401 ccatctcatc ttcgaagggc atgaccatgc ggcggggtcc gttggggcca aaccggaagg
     2461 caaacgagcg atctcccgga ccgccctgga ataggatgtc gggctcgtcg gcggtgacga
     2521 cggaaaccgt cttccggtcg ttgccacgcc gaaattcaat gggaacggtg tcgttgggcg
     2581 caagcttggc agccaattcg atcaaccgaa gcccgggaac cgactcgcgc tggttggcgc
     2641 cttcggccga cccgccagcc agcactgtct tgccatcgac ggaagtaatg atgtcacccg
     2701 actg
//
LOCUS       DASRPQ010001867         1315 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_526281, whole genome shotgun sequence.
ACCESSION   DASRPQ010001867 DASRPQ010000000
VERSION     DASRPQ010001867.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1315
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_526281"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..341)
                     /locus_tag="VFD73_21210"
     CDS             complement(<1..341)
                     /locus_tag="VFD73_21210"
                     /inference="COORDINATES: protein motif:HMM:NF013395.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HZI76490.1"
                     /translation="MLKRLVIVAVLAVCPTVGMTAASLAAPTGCPQFFPDGTAPDLVN
                     RKLLAKTREICYAAFAVLHSGITRTPLWAAEHLTRDRLAAAVATERKNTFHEEPRLPP
                     DERADLDDYARS"
     gene            complement(456..1301)
                     /locus_tag="VFD73_21215"
     CDS             complement(456..1301)
                     /locus_tag="VFD73_21215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011020875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZI76491.1"
                     /translation="MADKPYPTDLSDQEWELIRPLLERPQGRHGQQHYSLRRIVDGCF
                     YVLRGGIAWRMMPHDLPPWENVYYHLRTWRRKGTWERVNQVLRERHRVAQGRKPQPTA
                     AVIDSQSAKTTEAGGPRGYDGGKKVTGRKRQVLVDTEGTLLKAKVHPADIHDKVGGML
                     LLTCLHLLFPTIVLVWADSSYQGLKSWIKDNLGWTLTIAKHWWTGIHGFWCAPGQQPP
                     TIPSGFHVLPRRWVVERTLAWFTRNRRLAKDYERLPETGETFLYMAMSRILIKRLTKR
                     LEQAA"
BASE COUNT          241 a          384 c          430 g          260 t
ORIGIN      
        1 gagcgcgcgt aatcatcgag atcggcgcgc tcatcgggcg gcaacctggg ttcctcgtgg
       61 aaggtgttct tgcgctcggt agccaccgcc gcggcgagtc ggtcccgggt caggtgctcg
      121 gccgcccaca gcggggtgcg cgtgatgccg gagtgcagca cggcgaacgc cgcgtagcag
      181 atctcccggg tcttggcgag gagcttccgg ttgaccagat ccggcgcggt gccgtccggg
      241 aagaactgcg ggcatccggt cggggctgcc aaggacgcgg ccgtcatgcc gacggtcggg
      301 cacaccgcga gaacggcgac gatgacgagg cgcttcagca tgtggtcacc agatcaagct
      361 cagtgatgct gagcgcgtcc caatagacgc ggtttaggtc caagaatgta ctgagagggt
      421 gttgaggtga aggtttgata aaatagcggc aaagttcagg ctgcctgctc taggcgtttt
      481 gtcagccttt tgatgaggat tcggctcatg gccatgtaga ggaaggtctc gccggtttcc
      541 ggcaaccgtt catagtcttt ggccagacgt cgatttcgag tgaaccaggc gagtgttctt
      601 tcaacgaccc accggcgcgg taaaacgtgg aagccggaag gaatagtcgg cggttgctga
      661 ccgggagcac accagaagcc atggatgccg gtccaccaat gcttggcgat cgtcagcgtc
      721 catccaagat tatccttgat ccagcttttc agaccttgat agctgctgtc ggcccatacg
      781 aggacgatag tggggaacag gaggtggagg caggtgagca ggagcatgcc gccaaccttg
      841 tcatggatgt cagccgggtg aaccttggct ttcaggagag tgccttcggt atcgaccagc
      901 acctggcgct tgcggccggt taccttcttg ccgccgtcat agccgcgcgg gcctcctgct
      961 tcggtggtct tggccgactg gctgtcgatc accgccgctg tcggctgggg cttgcgtccc
     1021 tgggcgaccc gatgacgctc gcgcagaacc tggttgaccc gctcccaggt tcccttccgg
     1081 cgccacgtgc gcaggtgata gtaaacgttc tcccacggcg gcaggtcgtg aggcatcatg
     1141 cgccaggcaa taccaccacg cagaacataa aaacagccat cgacgatccg ccgtaaactg
     1201 tagtgctgct ggccgtgccg cccttggggc cgctcaagca gcggcctgat caactcccat
     1261 tcctgatcgc tcaagtccgt cgggtagggt ttgtccgcca tgacgagtcc tccgg
//
LOCUS       DASRPQ010001868         2045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4284033, whole genome shotgun sequence.
ACCESSION   DASRPQ010001868 DASRPQ010000000
VERSION     DASRPQ010001868.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4284033"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..207)
                     /locus_tag="VFD73_21220"
     CDS             complement(<1..207)
                     /locus_tag="VFD73_21220"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI76492.1"
                     /translation="MSHQTLPPRTILLVEDHDDVRQGLVRALRDDGYHVIEARDGELA
                     LSVLATGLRVDLVVTDIVMPNMGGL"
     gene            complement(817..1200)
                     /locus_tag="VFD73_21225"
     CDS             complement(817..1200)
                     /locus_tag="VFD73_21225"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI76493.1"
                     /translation="MSTLLVIDDEPVVRRVACQTLREAGYTCLEADSALAALEQLQSD
                     RLRLDGLVVDIRLPDMSGLNLVRLARVHRPGTPVLFISGYAPPEATEPELQRLLQAFL
                     AKPFTSDQLLAAVREYLPTPQSAKP"
     gene            1619..1789
                     /locus_tag="VFD73_21230"
     CDS             1619..1789
                     /locus_tag="VFD73_21230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76494.1"
                     /translation="MGKRIFHSRRASPPPGAPSPEGEPDQGFGSSLEALLRADRIARD
                     MLERWDRQEPGE"
BASE COUNT          377 a          638 c          647 g          383 t
ORIGIN      
        1 cagccctccc atattaggca tgacgatgtc tgtcaccacc aggtcgacgc ggagaccggt
       61 ggccaacaca ctcagggcca gctcgccatc gcgtgcttcg atgacgtggt agccgtcgtc
      121 tcggagcgct cgaacgagcc cttgacgaac gtcgtcgtga tcctcgacga gcaggatggt
      181 tcttggcggg agcgtctggt gtgacatcgg agcctgcctc aagcgtaacc aactggaacc
      241 ggcaagacga gtagtggtcg tcgcggtaga gcctaggggt tctcaggcca cactagcggt
      301 gagcgcgctc acgcggcttg cgttcgctcg cgtaccaacc agccgaccct gtggctgcct
      361 cggcgactcc agccggctgc ctgacgctcg caagcctccc gcacgggcct ttctgtacgg
      421 tagccgccct aacgatgcct ttcgcttgtg ggcagcttcg acggcacttc accgttgcct
      481 ccgctgtcga ggttctcacc tggattaaca aacgcctcac ggaggcacag caaaggttca
      541 gcctagaatg atccggactg cgcaggccgg gcgcagcagc cgatgagctc gcttcgggaa
      601 gcggatctcg tcggggaacg gactaacccc cgcgaggctc agcagcatca agcaacaccg
      661 tccttccatc caagcttgat atcgtctccc ttcccttacc ctcagcagtg ccccggaaga
      721 tctggcgata agcggggagc ttcgacgtga tccccgatcg gatcgtctca ggtgagacac
      781 ttcgaaggat tttccacgac acacggacct ccggattcac ggcttggcgg actgaggcgt
      841 gggtaggtac tctcggaccg ccgccaggag ctgatcagac gtgaatggct tggcgaggaa
      901 ggcttgtaac agccgctgca gttccggttc tgttgcttcg ggcggcgcat acccggaaat
      961 gaagaggacg ggtgtcccgg gtcgatgtac ccgcgccagc cggacaaggt ttagtccgct
     1021 catatcggga agccggatgt ctacaaccaa cccgtcgagc cgcagccgat ctgactggag
     1081 ctgctccagc gccgcgaggg cggaatcagc ctcaaggcag gtatagccgg cctcgcgaag
     1141 ggtctggcac gccaccctgc gcaccacagg ttcgtcatca atcacgagaa gggtggacat
     1201 cctatttgcc cttcgcgcgg ggccgtttcc gccgttcgtt cggcgcgcca ccattcactg
     1261 cctctcgcaa ttttgccacc tcttccgcca gctcatccga ccgctgccgt agtgcctcgc
     1321 ttagagccaa gagtcggtcg agagcttcag cggtggtttc tgcctcggat ttgcgttggt
     1381 ttggcatagg gacaatctag cgccggactg cctgaaccgg gacactaccg gaccacgttt
     1441 cggagcttcc gaggtctagc aacaatcggt aaggtgctag ggatgctcaa agttctcctg
     1501 gttgacgatg agccggttgt tcgggcaatc atcgaccgcg ccctcaacga tgcgacgcat
     1561 ttggtgggcg gtcaaagtcg gcccgggggc cgccttccgc ggaaccaagg agggacggat
     1621 gggcaagcga atcttccaca gccgcagggc gtcgccgcct ccgggggcgc ccagcccgga
     1681 gggggaaccc gatcagggtt tcggctccag cctggaggcc ctgctgcgag ccgaccgcat
     1741 agcccgagac atgctggagc gctgggatcg ccaggagccc ggcgagtgat cggtggggca
     1801 gcggttgccg ccggagagag gcggccgctc aggcccaagg ggacataggc agaaacaagc
     1861 ctagcgggct gtttggtgag ccctaagatg ttctacttac cctcaccgtg agtggcacgg
     1921 aatggtcatc gctatacgcc cgctccccga gcaggtggtg ctagtggttg atgacgatgc
     1981 ggccgtgtgt attctgactg cccggatcct ggccgaggcc ggctttcacg tcctggaagc
     2041 gcaca
//
LOCUS       DASRPQ010001869         1225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1810776, whole genome shotgun sequence.
ACCESSION   DASRPQ010001869 DASRPQ010000000
VERSION     DASRPQ010001869.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1810776"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..708)
                     /locus_tag="VFD73_21235"
     CDS             complement(<1..708)
                     /locus_tag="VFD73_21235"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZI76495.1"
                     /translation="MSTKQERIAALAKQSPQMAFTSLAYLVDIDWLTEAYRRTRKDGA
                     TGVDGVTADEYEQNLESNLQGLLDRVKSGTYRAPPVRRVHIPKGGSSTETRPIGVPTL
                     EDKVLQRAVVMLLEPIYQQDFTACSYGFRPGRSAHQALDAFRGQLMDSRGGYILEVDI
                     RKFFDNLDHGHLRAFLRLRVRDGVLLRLIGKWLKAGVLEDGSVSYPVSGSPQGGVVSP
                     LLSNVFLHYVLDKWFERD"
BASE COUNT          206 a          422 c          361 g          236 t
ORIGIN      
        1 gtcgcgttcg aaccacttat ccagcacata atgcaggaag acgttcgaaa gcaaaggaga
       61 aaccacgccg ccttggggcg agccggagac cgggtagctg acgctcccat cctccagcac
      121 gcccgccttc agccatttac cgatgaggcg cagcagcacg ccgtcacgca cccgcagtcg
      181 aagaaacgcg cgcagatggc cgtgatccaa gttgtcgaag aacttgcgaa tatccacctc
      241 taagatatag ccaccccgac tgtccatcaa ttggccgcgg aacgcgtcca gcgcttgatg
      301 cgccgatcgc cccggccgga agccgtacga gcaggccgtg aagtcctgtt ggtagatcgg
      361 ttccagcagc atgacgaccg cccgctggag aaccttgtcc tccagggtcg ggactccgat
      421 ggggcgcgtc tccgtgctgg agccgccctt gggaatatgc acccgccgca ccggaggagc
      481 gcggtacgtg ccggacttca cgcggtccag caggccctga aggttgctct ccaggttctg
      541 ctcgtactcg tccgcggtca ctccgtccac gcccgttgca ccatccttgc gggtacgccg
      601 gtacgcttcc gtgagccagt cgatgtccac caggtaggcc agcgaggtga acgccatctg
      661 cggcgattgc ttcgccagcg ctgctatccg ctcctgtttc gtggacacgc ttgtcgaatt
      721 tcgaggcatt cgccgtgttt ctcaagagcg gttccgtgat ccgacgcctc gcttccctcc
      781 cctggctccg ggcgggaccc gttcgccagc ttcgtcggta ctatcaaggc gctatgactg
      841 cctgccgccc ctcccgccgc gcttcgttgc cttcgcttgg cggtacctcg gttgcactcg
      901 ttctgttcgc tccggggcgg acgagtgcgc cgccccggcc tggagttggt gacccggtgg
      961 ctccagccgg gatgtgccga ggaaacgaca ggctctccca agttcttggg gaaccccgat
     1021 tgtccgtttg cgcatgttcc acaccgacgc cggcaggacc gctggcacca gacccctaca
     1081 gtgccgcggc gtggcccctg gtcatcgaac ggcaaaggct cctgcgaaag gactttcgac
     1141 gctcaatagc atggctttcg gactcgctgt ctacgcttcg cagtgcgggt taccccgccc
     1201 aacgcaagac tcgcttccgg ccgct
//
LOCUS       DASRPQ010001870         2206 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2404046, whole genome shotgun sequence.
ACCESSION   DASRPQ010001870 DASRPQ010000000
VERSION     DASRPQ010001870.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2404046"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2206)
                     /locus_tag="VFD73_21240"
     CDS             complement(<1..>2206)
                     /locus_tag="VFD73_21240"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI76496.1"
                     /translation="QDWLKTNLAKFSRTLQGQRDLAAVSQLILSDLAPLVTAHHGVFY
                     VVDPSGEESTLKLLASYAYKNRKDVSSEFRLGEGLVGQCAVERRMLLINQVPEDYIQI
                     SSGLGEAAPRSIAVMPVLFEGDVKAVLELATFDEFDEIRLTFLEQLAESIGIVLNTIE
                     ANMRTEELLKQSQALTEGLQQQQEALTETNKRLEQQTRSLQKSEDLLRNQQDELQKTN
                     LELEEKAHLLAGQKAEVEQKNKEVEQAKVALEEKAEQLALISKYKSEFLANMSHELRT
                     PLNSLLILSQILSENADGNLTSKQVGFAQTIHSSGSDLLDLINDILDLSKIESGTMAV
                     DITTVSFAEVRKFVESTFRQVADLKGLNFEVGLDPSLPPAMQTDTKRLQQVLKNLLSN
                     AFKFTERGGVSLSATVVNEGWNPEQELLNAANTVIAFSVSDTGIGIPKEKHGVIFEAF
                     QQGDGTTSRKYGGTGLGLSISRQITRLLGGEIRIESTPGVGSTFTLYLPLIYPAPPVE
                     STSVDRENGGAGAVADAPKPMITASSRVVLAPVVERAVNDDRASIEEGDRILLIAEDD
                     PNFAQILLDLARERGFKGLVAQTADRALALAREYQLTAVTLDLRLPDADGWTILDRLK
                     HDPATRHIPVHIISGDEDRRRGLALGAMTYLEKAVAKDSLVEAFALIEESTQKRVKKL
                     LLVGAQDSDRQKIAAFVRASDLEVIEVQSAGEALAVAKHQYLDGVVIHLELEG"
BASE COUNT          372 a          681 c          693 g          460 t
ORIGIN      
        1 ccctccagtt ccagatggat gaccacgccg tcaagatact ggtgcttcgc aacagccagt
       61 gcctctcctg cgctttgtac ttcgatgact tcgaggtcag acgctcgcac gaaggcggct
      121 attttttggc ggtcggaatc ctgggcgcca accagcagca gttttttcac acgcttttgg
      181 gtagactcct caatgagagc gaacgcctct acgagagaat ctttggcgac ggccttctcc
      241 aggtaggtca tcgcgccgag tgccaggcca cgccggcggt cctcgtcgcc cgaaatgatg
      301 tgaaccggaa tatggcgggt cgccgggtcg tgcttcagcc ggtcgaggat cgtccacccg
      361 tcggcatcag gcagcctgag gtccaaggtg actgccgtga gctgatattc gcgggccagc
      421 gcgagcgcgc ggtccgccgt ctgtgcaacc agccccttga agccgcgctc gcgagccaga
      481 tccagcagga tctgcgcaaa gttgggatcg tcctccgcaa tgaggagaat gcggtcccct
      541 tcttcgatgc tggcgcggtc gtcgttgacg gcgcgctcca cgaccggagc cagcactacc
      601 cgggaactgg cggtgatcat gggcttgggg gcgtcggcca ccgcccccgc tccgccgttc
      661 tcgcgatcca ccgatgtgct ctctaccggg ggagccggat agatgagcgg gaggtacagg
      721 gtgaaggtgc tcccgacacc gggcgtactc tcgattcgga tctcaccacc cagaagacgg
      781 gtaatctggc ggctgatcga gagcccgaga ccggtgccgc cgtatttccg gctggtggtg
      841 ccgtcgccct gctggaaggc ctcgaagatg acgccgtgct tctccttcgg aatgccgatc
      901 ccggtgtccg acaccgagaa ggcgatcacc gtgttggccg cgttgagcag ctcctgctcc
      961 gggttccagc cctcgttgac caccgtggcg ctcagtgaga caccaccccg ctcggtgaac
     1021 ttgaacgcgt tcgacagcag gttcttgagc acctgctgca gccgtttggt gtcggtctgc
     1081 atggcgggcg gcaggctggg atcgaggccg acctcgaaat tgagaccctt gaggtccgca
     1141 acctggcgga acgtgctctc cacgaacttg cgaacttcgg caaatgacac ggtggtgatg
     1201 tctaccgcca tggtgccgga ctcgatcttc gacagatcca ggatgtcgtt gatcagatcg
     1261 aggaggtcgg acccggagct gtgaatggtc tgggcaaagc cgacctgctt gctggtgagg
     1321 ttgccgtcgg cgttctcgct caggatctgg gacagaatga ggaggctgtt gagcggagtc
     1381 cggagctcgt gcgacatgtt ggcgaggaac tcggacttgt acttggagat cagggccagc
     1441 tgctcggcct tttcttccag cgccaccttg gcctgctcga cctccttgtt cttctgctcc
     1501 acctcggcct tttgaccggc aagcagatgg gccttctcct ccagctcgag gttcgtcttt
     1561 tggagctcat cctgctggtt ccggagcagg tcttccgact tctggagcga gcgggtctgt
     1621 tgctccaggc gcttgttggt ctcggtcagt gcctcctgct gctgctgcaa accttcggtg
     1681 agcgcctggg actgcttcag cagctcttcg gtccgcatgt ttgcttcaat ggtattgagc
     1741 acgatcccga tgctctcggc gagctgctcc aggaaggtga gccggatctc atcgaactcg
     1801 tcgaacgtgg ccagctccag gaccgccttc acatcgccct cgaagagcac cggcatgacc
     1861 gcgatgctcc gcggggctgc ttcacccagc ccagagctga tctggatata gtcctccggc
     1921 acctggttga tcagcagcat ccgccgctcg acggcgcatt ggccaaccag cccttcgccc
     1981 agccggaact cactggacac gtccttccgg ttcttgtagg cgtaactggc caacagcttc
     2041 agggtggact cctcgccgga gggatcgacc acatagaata cgccgtggtg ggcggtaacc
     2101 agcggggcca agtcggagag gatgagctgt gacacggcgg caaggtcgcg ctggccctgc
     2161 agcgtccgac tgaacttggc aaggttggtc ttgagccagt cctgct
//
LOCUS       DASRPQ010001871         1275 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3386478, whole genome shotgun sequence.
ACCESSION   DASRPQ010001871 DASRPQ010000000
VERSION     DASRPQ010001871.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3386478"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..193)
                     /locus_tag="VFD73_21245"
     CDS             complement(<1..193)
                     /locus_tag="VFD73_21245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HZI76497.1"
                     /translation="MNADLTSTTFTLPGYRIVQTLGVVRGVTVRSRSLIGTIGAKIET
                     LFGGQIAMLTNLCERTREDA"
     gene            complement(190..684)
                     /locus_tag="VFD73_21250"
     CDS             complement(190..684)
                     /locus_tag="VFD73_21250"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HZI76498.1"
                     /translation="MEDPSFTQVRHPFSMECAVQVTIGAPAAVVWTILTDAPAFPRWN
                     STVTSIEGDIREGAHLRLHVPGTTRTFTPTVSGMVTNQRMTWTGGFEPLFKGVRTFML
                     TPRNSDSTDFAMTERFSGLLLPFVRRSLPDFGPVFRTYANDLKREAERVGSKWWVKAP
                     RKEP"
     gene            complement(756..1022)
                     /locus_tag="VFD73_21255"
     CDS             complement(756..1022)
                     /locus_tag="VFD73_21255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76499.1"
                     /translation="MPSRGSTPAERQIQVRQVTHVQASWTEEERGAPGAFTLQLVLDH
                     GADEYVLRPSADDTDVLVKLLARSKSATFDLERKVLIFANLAIE"
BASE COUNT          244 a          396 c          391 g          244 t
ORIGIN      
        1 acgcgtcctc tcgagtccgt tcgcaaaggt tggtgagcat cgcgatctgt ccgccgaaga
       61 gcgtctcgat cttggcaccg atcgttccaa tgagcgagcg ggagcgaacg gttacgcctc
      121 gcactacccc caacgtctgg acgattcggt acccgggaag agtgaaggtt gtggaggtca
      181 ggtcggcgtt cacggctcct tcctcggtgc ctttacccac cacttcgagc cgacgcgttc
      241 ggcttcccgt ttgagatcat tggcataggt acggaagacc ggaccaaaat ccggcaggga
      301 gcggcggacg aatggcaaca gcaggcccga aaagcgctcc gtcattgcga aatcggtcga
      361 gtcgctgttg cgcggggtca gcatgaacgt gcgcacgccc ttgaagagtg gctcgaaccc
      421 gccggtccag gtcatccgtt ggttcgtgac cattccggag accgttggcg tgaaggtccg
      481 ggtggttccg ggaacgtgca gccggaggtg ggctccttcg cggatatcgc cctcgatgct
      541 ggttacggtg gaattccagc gggggaacgc tggcgcatcg gtcagtatgg tccacaccac
      601 tgccgctggt gcgccgatgg tgacctgcac agcgcactcc atggagaacg ggtggcgaac
      661 ctgggtgaag ctcgggtctt ccatgatcgc tcctgcccat cgccaaatgc aatggacgtg
      721 tccaccgacc gcctgggcac tgctgccgag ccgacctatt cgattgcgag gttggcaaaa
      781 atgagaacct tgcgctccaa atcgaaggtt gcactcttgc tccgcgccag gagcttcacc
      841 aggacatccg tgtcatccgc gctcggccgg agcacatact cgtcggcacc atgatccagg
      901 accaactgca gcgtgaatgc tccaggcgca ccgcgctcct cttccgtcca ggaagcctgt
      961 acgtgtgtaa cctgccgcac ctggatctgg cgctcggcag gggtagatcc gcgtgatggc
     1021 atatatcgct ccgtcgagag tggtcgcacc aaagccgcat aggttttcca gaactctctc
     1081 gcatgaaagc gcaggctcta cgatgcgaag gtagttcatc gagatccgat cttaccccag
     1141 cgcctgatcc agatcggcca ccagatcatc gggatgttcc aagccaaccg acaggcgaag
     1201 caggccctcc gccgcgcggg tttcactgcc ctcgatcgag gcgcggtgct cgaccaggct
     1261 ctcgggaccg cccag
//
LOCUS       DASRPQ010001872         1440 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1151512, whole genome shotgun sequence.
ACCESSION   DASRPQ010001872 DASRPQ010000000
VERSION     DASRPQ010001872.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1440
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1151512"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..350)
                     /locus_tag="VFD73_21260"
     CDS             complement(72..350)
                     /locus_tag="VFD73_21260"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HZI76500.1"
                     /translation="MSEGKELMEILDDHELEVEMIVPSRWLVWLKTGNKFKVLIEETG
                     KTFNAEVTRLSARIDPVSQSIKVFGKVASRDDELLAGMSGRAVFAVPN"
     gene            476..1440
                     /locus_tag="VFD73_21265"
                     /pseudo
     CDS             476..1440
                     /locus_tag="VFD73_21265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611729.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
BASE COUNT          250 a          460 c          456 g          274 t
ORIGIN      
        1 ttcccgtgcc atgggttccc ccctcttacg cttcctgtat gggcgctttc ctgtgtagca
       61 ggcaatgtag cctaattcgg caccgcgaac acggcccggc cgctcatacc tgccagcaac
      121 tcgtcgtccc ggctcgccac tttgccgaac accttgatcg actggctaac gggatcgatg
      181 cgggctgaca gacgcgtcac ctcggcgttg aaggtcttgc cggtttcctc gatcagcacc
      241 ttgaacttgt tgcccgtctt cagccagact agccagcggg acggaacgat catttcgacc
      301 tcaagctcat ggtcgtccag aatctccatc aactccttgc cttcgctgat accgcattca
      361 gaaaattgtg actcttgaag agactggcta gggctggcga gcgatagcta ccggggcttg
      421 cgggagctgg cagtttgtga ttcggtttca ctgcggtgat ttgcggagga acaggatggt
      481 ggctgttgcg atccgacgag acattgcggc aggcgacttg cgacgtcagg ctcgcctgga
      541 gcgggacggt cgggttgcca gtcggctcct agcgctggcg gcggcgctcg atggcgtcag
      601 ccgtgagcag gccgcccgca tcggcggaat ggatcggcag accctgcggg actgggttca
      661 ccgcttcaat gaagcgggtg tggaaggcct gcgcgaccgt acccgaccgg gtcggccttg
      721 cctgctggcc gaagagttgc tcccggagtt ggcagccttg atcgccgacg gtccgcagat
      781 cgagcgcgat ggtgtggtcg agtatcgcct gtcgcatatc cgcgagttgt cccggcgtca
      841 tttcggcgcc gactacagtc agggcggcat gcacgctgtg ctgcgccgga tgggcttttc
      901 ctggctgaag ccccgaccga tccatcccag gaccgacctg gctgcccagg aggcgttcaa
      961 aaaaacttcg gccagacggt ggcgggcatc caggatcagc atcccgacgc cgagcgggtg
     1021 gaggtctggt ttcaagacga ggccagggtt ggccagaaag gctcgctgac ccatctgtgg
     1081 gcaccaaccg gcacgcggcc gagggcggtg cgcgatcatc gcttcaagtc cgcctacatc
     1141 ttcggcgcgg tgtgcccgga gcgggatacc ggcgtggcgc tggtggtcag ccgagccagc
     1201 accgaggcga tgaacctcat gctcaccgaa atcagccagg cggtcggcga cacggcgcac
     1261 gccgccgtac tgatcgacgg agccggctgg cacaccgcaa acgatctcgt ggtgccggcc
     1321 aacatcaccc tcgtcccgct gccgccctac agcccagagc tcaacgccat cgagcgtctg
     1381 tggcaggtca tgcgggacac cctgctctca caccgcctgt tcaccgatct caaccacatc
//
LOCUS       DASRPQ010001873         1523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4611387, whole genome shotgun sequence.
ACCESSION   DASRPQ010001873 DASRPQ010000000
VERSION     DASRPQ010001873.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4611387"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(198..>1523)
                     /locus_tag="VFD73_21270"
     CDS             complement(198..>1523)
                     /locus_tag="VFD73_21270"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HZI76501.1"
                     /translation="SRVRARPDEKSDVSLSARWSDNRYRFPTDFSGALADSNQFNAER
                     DLVLGLDLGRRIGERYELRVSGSGSRVTGEFDDTPDSPGDTVGFGFASHRDTRSERGN
                     LEARLTGFLSSKVTVTAGAQVEHEVERQSGVTTSNFGGIATTPDTPFDRGRTTLGSYA
                     QAVVDLPSGIALDLNARLDDNSAFGTFGTYRAGASYRLPSGTRIRASLGRGFKAPTFC
                     EQFCDAPFVVGDSGLRPEHSFSWEVGVEQRLGSAPVSFWATYFDQRFRDLVLYDGSAP
                     AGEPTYFNGAAARARGIETGFTTELPAGLVASGSYTYLLTKATDDAGMPSATFADGEE
                     LIRRPKHAAELVLRGTVAGRVTFGGSASYIGARQDVDFNQFPSQRVTLPSYIVVDLAA
                     ELELLHGGAGRPQVSGTIRAENLFNERYDEVVGFAGRPRGIFGGARVHF"
BASE COUNT          285 a          509 c          462 g          267 t
ORIGIN      
        1 cgggaagcag actcagcgtt gccgcggtgc tgttgagaac gacgatgacc tcttccggag
       61 ccggcggagg agcagcggtt tcggcgcagc cccagcctgc cgcacagctc acagccagcg
      121 cgcctcgtcg ggccacacga gcaaagctca ttgctgaaag attcaagcat ggggctcggg
      181 ccgccagtcg agctgcctca gaaatgcact cgcgcgcctc cgaaaattcc tctcggtctc
      241 ccggcgaagc cgacgacctc gtcgtaccgt tcgttgaaca ggttctccgc ccggattgtc
      301 cccgacacct ggggtcgacc tgccccgcca tgcagcagtt ccagctcggc agcgagatcg
      361 accacgatat aggacggcag cgtcacccgc tggctgggaa actggttgaa gtccacatcc
      421 tgccgcgcgc cgatatagct ggccgatcct ccaaacgtga cacgcccggc gacggtgccc
      481 cgcaggacca gttccgccgc gtgcttcggc cgccggatca gctcctctcc gtcggcaaag
      541 gtggccgagg gcattcccgc gtcatcggta gccttcgtga ggaggtaggt gtaggaccct
      601 gaggccacga gtccagcggg gagctccgtt gtaaatccgg tttcgattcc ccttgcccgg
      661 gctgccgctc cattgaaata ggtcggctca cctgccgggg cacttccatc gtagaggacc
      721 aggtctcgaa accgctgatc gaagtaggtg gcccaaaagg aaaccggcgc cgagcccagg
      781 cgctgctcta cgccaacctc ccagctgaac gaatgctccg gccgaagacc ggagtctccc
      841 actacgaacg gggcgtcgca aaattgctcg cagaaggtgg gagccttgaa gccacggccc
      901 aatgacgctc gaattctggt tcccgacggg agccgatacg aggctcccgc ccgatacgtc
      961 ccaaacgtcc cgaaggcgct gttgtcgtcg agccgtgcgt tcaggtccag cgcgattccc
     1021 gacggaaggt ctacgactgc ctgagcgtag ctcccgaggg tggtccggcc gcggtcgaac
     1081 ggagtgtcgg gagtggtggc gattcctccg aaattcgaag tggtcacgcc cgactgtcgc
     1141 tcgacctcat gctccacctg agcgcctgcg gtcaccgtca ccttggagct gagaaatcca
     1201 gtcaggcgag cctccagatt ccccctttcg gagcgggtgt cgcggtgaga ggcaaaacca
     1261 aagcccacag tgtcccctgg gctgtcggga gtgtcgtcga actcaccggt gaccctgctg
     1321 ccactcccgc tgacccggag ctcgtagcgt tctccgatcc ggcgtcccaa gtcgagcccc
     1381 agcaccagat cccgctcggc gttgaactga ttactatcgg ccaaggcccc cgagaaatca
     1441 gtgggaaacc ggtaacggtt gtcactccaa cgtgccgata gactgacatc actcttttcg
     1501 tcgggtcggg ctcggactcg gct
//
LOCUS       DASRPQ010001874         1098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4611453, whole genome shotgun sequence.
ACCESSION   DASRPQ010001874 DASRPQ010000000
VERSION     DASRPQ010001874.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4611453"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1098
                     /locus_tag="VFD73_21275"
     CDS             <1..>1098
                     /locus_tag="VFD73_21275"
                     /inference="COORDINATES: protein motif:HMM:NF015644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HZI76502.1"
                     /translation="FDHPSGEQNVYASYAGKGGVPIGNVLRRAIFASQFGSSKILFSG
                     DITQASRILYYRDIMDRAKKALPFLSFDADPYLVIAADGSLQWILDAYTSTSHYPYAE
                     RLRDGTSYMRNSVKLVIDAYNGTLSAYVSAPTDPLIRTWARVFPGIFLGMDRMPEDLR
                     AHIRYPDGIYRIQTSLYTTYHMDDPEDFYHREDQWQIPAVDDSGGKVPFMRHLVMRLP
                     EEKTAEYIYMVPFTPRGKDNLAAWMVARNDGAEYGKLRVYRLSRQSLAFGPQQIVNRI
                     NQNTEISSQLTLWDQRGSQVIRGDLLVIPIEEALLYVQPLYLRAQGGRIPELKRVVVA
                     YQNRVVMRETLEDALAEMFGGASAKGAPEAEV"
BASE COUNT          223 a          337 c          330 g          208 t
ORIGIN      
        1 ttcgatcacc cgtcggggga acagaatgtg tacgcctcct atgcagggaa gggtggagta
       61 cccatcggga acgtgctccg tcgagccatc tttgcttctc agttcgggtc gtccaagatc
      121 ctcttctccg gagacatcac ccaggcgagt cggatcctgt actaccgcga tatcatggac
      181 cgggccaaga aggcgctgcc atttctcagc ttcgacgccg atccctatct cgtcattgcc
      241 gcggacggca gcctccagtg gatcctcgac gcctacacca gcacgagtca ctatccctac
      301 gccgagcgat tgcgcgatgg aaccagctac atgcggaact ccgtgaagct ggtgatcgac
      361 gcctacaacg ggaccttgtc cgcctacgtc agcgcgccca ccgatccgct gatccggacc
      421 tgggcgcgag tcttccccgg catcttcctg ggcatggatc ggatgcctga agatctccgg
      481 gcccacattc gctatcccga tggcatctac cggatccaga ccagcctgta caccacctat
      541 cacatggacg acccggagga cttctatcac cgggaagatc agtggcagat cccggcggtg
      601 gatgactccg gcggaaaggt gccgttcatg cggcacctgg tgatgcgttt gccggaagaa
      661 aagacggccg aatacatcta catggttccg tttaccccac ggggaaagga caatctcgcc
      721 gcctggatgg tcgcgcggaa cgacggggcc gagtacggca agctccgggt gtatcgactc
      781 tctcggcaga gcctcgcctt cggacctcag cagatcgtga atcgcatcaa ccagaatacc
      841 gagatctcga gccagctcac gctgtgggac cagcgaggct cgcaggtgat tcggggtgat
      901 ctgctggtca ttccgataga ggaggccttg ctgtacgtcc agccgctcta cctgagggcc
      961 cagggaggac gaatccccga gctcaagcgg gtcgtagtgg cgtaccagaa tcgggtggtc
     1021 atgcgagaaa cgctggagga tgccttagcc gagatgttcg gcggcgcttc ggcgaagggc
     1081 gcaccggaag ctgaagtt
//
LOCUS       DASRPQ010001875         1266 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2404498, whole genome shotgun sequence.
ACCESSION   DASRPQ010001875 DASRPQ010000000
VERSION     DASRPQ010001875.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2404498"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..372)
                     /locus_tag="VFD73_21280"
     CDS             complement(61..372)
                     /locus_tag="VFD73_21280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76503.1"
                     /translation="MSGYGRGDLVMYRPAGERWTVDGYYPGSDYYPASVLLGRCWAGK
                     RDHCRGPRGRVRASAASFVSSQTSRGRGGLPAQFGSPPCIRADIAVKVAATIMGCWTG
                     A"
     gene            770..1006
                     /locus_tag="VFD73_21285"
     CDS             770..1006
                     /locus_tag="VFD73_21285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76504.1"
                     /translation="MRLSKWRARLEMAAALCAGILGILTIFWHDWIEVLTGWDPDNHS
                     GAVEWIVVAGLLVAAVTMGLAAHHHWRLAAVPDR"
     gene            1085..>1266
                     /locus_tag="VFD73_21290"
     CDS             1085..>1266
                     /locus_tag="VFD73_21290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76505.1"
                     /translation="MPVDAALSPELAETARSAPFVFFGTVRQPGGSNVEALDREEEPT
                     AVVHVDEVVVAPQSLG"
BASE COUNT          225 a          387 c          422 g          232 t
ORIGIN      
        1 tgcgcggggc cacggccaac ctattaggtc ctcgcgctcg ggtcgtcacc agttgcgtga
       61 tcaggcgcct gtccagcagc ccatgatcgt tgcagcgacc ttgaccgcga tatccgcccg
      121 gatgcagggc ggcgaaccaa actgagcggg cagtccgccc cgtccgcgcg atgtctgcga
      181 cgagacgaag ctggccgccg aagccctgac ccggcctcga ggaccccggc agtgatcacg
      241 cttcccggcc cagcaccggc caagcagcac gctggccgga tagtaatcgc tgccggggta
      301 atagccgtct accgtccagc gctcaccggc cggccgatac atcaccaggt cacctcgccc
      361 atagccgctc atccccgatt ccttgcgccg cttcgcggca ctgtcgttag gtgctcaagc
      421 attcgtgcgc agtccgccgt cggcgggctc gctgagcagg aagagcatgt aggcggctac
      481 cgaggaatcg ccgatgatga tcccggtacg gatcatgtcc tccacctccg catgcaggac
      541 ttgaccaggc acccggagcg ccgaggttag gtatctatgt tgttgctgtc tcttgaccgt
      601 gggttgacca taggattatc catgataggt cgggccgtcg tcggatcacc gtgacagccg
      661 tgtcgggggc ctggaggtct ggttctcagc attttggcaa gctggcggtc tcgccgagca
      721 acgctcagcg agctagcgcg agcagggccg aaaggagggg agagcctagg tgagactttc
      781 aaaatggcgc gcacgacttg agatggcagc ggcattgtgc gcaggaattc ttggaatcct
      841 gactatcttt tggcacgact ggatcgaggt cctgaccggc tgggacccgg ataatcacag
      901 cggcgctgtg gaatggatcg tagtcgcggg gctgctggta gccgcggtca ctatgggtct
      961 ggcggcacac caccattgga ggctggcagc ggttccggac agatagcaac aggaaggctc
     1021 ggcggaagat gcaatctccc ggtgggtata aatgatcgtg cccagttctc tgtaggaggt
     1081 aactgtgccc gtggatgcgg ccctgtcacc ggaactcgcg gagaccgctc gctcggcgcc
     1141 gttcgtgttc ttcggcaccg tccggcagcc gggcggctcc aacgtagaag cgctcgaccg
     1201 cgaggaggag ccgacggcgg tcgtgcacgt ggacgaggtt gtcgtcgcgc cgcagtccct
     1261 ggggga
//
LOCUS       DASRPQ010001876         1036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_843729, whole genome shotgun sequence.
ACCESSION   DASRPQ010001876 DASRPQ010000000
VERSION     DASRPQ010001876.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_843729"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..241)
                     /locus_tag="VFD73_21295"
     CDS             complement(<1..241)
                     /locus_tag="VFD73_21295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76506.1"
                     /translation="MWVPVRPPGLLEKSLLEGLTSIDRFTLVSRFATGRADAITTDGG
                     GGRPGLNAGQQRAWMACCSPGLHLVWGPPGTGKTKV"
     gene            263..454
                     /locus_tag="VFD73_21300"
     CDS             263..454
                     /locus_tag="VFD73_21300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76507.1"
                     /translation="MLRDPDLEDVPYLDSLDQLELVLLRSFCRRQVGGFELIILDSPA
                     RKAYPEPSRAKFCVGGNAA"
BASE COUNT          188 a          327 c          312 g          209 t
ORIGIN      
        1 tgacctttgt ctttcccgtt cccggaggac cccagaccaa gtggaggcct ggcgagcagc
       61 aggccatcca ggcgcgctgc tgcccggcat tcagccctgg cctgccgccg cccccgtctg
      121 tcgttatcgc gtcagcgcgg cccgtggcga accggctgac cagagtaaac cggtcgatcg
      181 aggtcaagcc ttccaggagc gacttttcga gaaggccggg tgggcgaacg ggcacccaca
      241 tgaagagtcc tgttgctggc gcgtgcttcg cgaccctgac cttgaggacg ttccctatct
      301 ggatagtctc gatcagttgg aacttgtgct gctgcgctcc ttctgccggc gccaggtagg
      361 cggcttcgag ctgatcattc tcgatagccc ggctcgcaag gcctatccag aaccatcccg
      421 ggccaagttc tgcgtcgggg gaaacgcggc ctagattccg tgcttttctt gtcgtggtgc
      481 ccggtgagtc cctttccggt tccgggcaca gccgccggac cacaccgatc aattcttcta
      541 gccactctgg tcgctgtggg tccgccacga atttcctcgg tccggatgag cgagacgaca
      601 gtgacagcag attaacttat gcagtgctgg ttccaaattc actgcgcata ccgccggtct
      661 gatgggtaaa ctcgacttta tattcaaagc gtctccctca actccgtgcc gatcggatgt
      721 ttgcttgaag aagctcggat gctgaagttg cccttgagaa aactattata ccgaggtatt
      781 aaattagaca gcggtctacg ggaccgctgc cgctgagcgg agttctactt ccgccagccg
      841 ctctttcgcc cagcgggtct aacgggacac agaacgtcag ggccgtggga acagccagaa
      901 ctcgcgcatg atggcgaagg accaggcgcc gagcccgaac atcgccacgg cggcggcggc
      961 tgatgtcacc gccgccagcg ttgcccggcg tggcaggcgc gtcaccagcc agctgccgag
     1021 cagcgcgatg gcgccg
//
LOCUS       DASRPQ010001877         1009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_527431, whole genome shotgun sequence.
ACCESSION   DASRPQ010001877 DASRPQ010000000
VERSION     DASRPQ010001877.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_527431"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(5..193)
                     /locus_tag="VFD73_21305"
     CDS             complement(5..193)
                     /locus_tag="VFD73_21305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76508.1"
                     /translation="MFISLTLPSLSLPSARILALFALLLVADAITVYGRGPRPVSFSG
                     QDVRQAVLVTRSQAPALA"
     gene            complement(361..489)
                     /locus_tag="VFD73_21310"
     CDS             complement(361..489)
                     /locus_tag="VFD73_21310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76509.1"
                     /translation="MKRPVKSIAVELEPSNISVVLVVSGLVFAMNVIATIVTLMMA"
     gene            complement(611..952)
                     /locus_tag="VFD73_21315"
     CDS             complement(611..952)
                     /locus_tag="VFD73_21315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76510.1"
                     /translation="MRTAPTLGLLALTGLALTGLALVGQARAEDSMATTTIRNGHSVS
                     SVTQSGDPAKVTRHVEKRPGYTRIEQHSGGNHSVVVQSTNPADMPKMPELGKLQTDIE
                     RMLREHGLDDD"
BASE COUNT          181 a          305 c          346 g          177 t
ORIGIN      
        1 gagatcaggc gagggcgggc gcctgcgaac gggtgaccag gacagcctgg cgcacatcct
       61 gaccggagaa ggacacggga cgggggccac ggccatagac ggtgatggcg tcggcaacca
      121 gcaggagggc gaagagagcc aggatccggg cggaggggag ggagaggctg gggagggtca
      181 ggctgatgaa catgggttcg gctccggatg aggcgaacct gcacctgatc cgggcggcgg
      241 actgtcatgc acatcacaga agcgcattcg gcggccgaag ctgatcgcca gctcgtcaga
      301 gcctgatctc gcctgcggaa cagacaggcc cgccttctgg tcgggcctgt ccggatctca
      361 ctaagccatc atcagggtca caatggtcgc gatgacattc atcgcgaaca ccaagcccga
      421 caccaccaag accactgaaa tattagacgg ctccaactcc acggcgatgg acttcacagg
      481 gcgtttcatt gtcatctcct aaaggggcag gtgttctctc aatctgggtc cgtagccagg
      541 ccggggctca ggctctgtga cccggatcac agagtgatgg cgccagcgcc cggcatcggg
      601 ggatcctagt ctaatcgtcg tcgagcccgt gttcgcgcag catgcgctcg atgtccgtct
      661 gcagcttgcc cagctcgggc attttgggca tgtcggccgg gttggtgctc tggaccacga
      721 cggagtggtt gccgccgctg tgctgctcga tccgggtata gccgggccgc ttctccacat
      781 gccgggtcac cttggcggga tcgccgctct gggtgacgct cgagacgctg tggccgttgc
      841 ggatcgtggt ggtggccatg ctgtcctccg cgcgggcctg gccgacgaga gccaatcccg
      901 tcagagccaa gcccgtcaga gccagcaggc ccagtgttgg tgccgttctc atcctgtgtc
      961 tcctcaaggg accccaaggt cgtcccgagg tcctgtggcc gagtcgagg
//
LOCUS       DASRPQ010001878         2001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3690144, whole genome shotgun sequence.
ACCESSION   DASRPQ010001878 DASRPQ010000000
VERSION     DASRPQ010001878.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2001
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3690144"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1143)
                     /locus_tag="VFD73_21320"
     CDS             complement(<1..1143)
                     /locus_tag="VFD73_21320"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI76511.1"
                     /translation="MKFTNVQDFTGDRSLTLETNAVDPAAPRTELPYRPISETLAIVP
                     SVSVIIPAKNEAANLAHVFATLPPWVDEVILVDGHSVDDTVAVTRALYPEAKVVEQPG
                     KGKGDALQAGFAAATGEIIVMIDADGSTDGREMIRFVGALLAGADFAKGSRFSSSGGS
                     DDITGVRRYGNWLLSFLVNRMFGTRFTDLCYGYNAFWARHLDVMELGSGPGFEVETLM
                     NIRAAKAGLKIYEVPSYEWPRISGESNLRAVRDGWRILMVIVREWLRGMRKRDPRRLT
                     AAQATAPVTSGVMAEIAAGSYREHMYVSETSVDHTEVVAAIAANDVTGVSTAYDRYGE
                     GLYTYCRSRLSQPADAADAVQNTFINASAKVSELTQPSRLRAWLFAV"
     gene            1736..1936
                     /locus_tag="VFD73_21325"
     CDS             1736..1936
                     /locus_tag="VFD73_21325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76512.1"
                     /translation="MSPVRGDLRHRSVFGYFALDTPVSSALTHELTACSRSGRLIEDL
                     EKVVTSIPGHMMGGWRRQVPVS"
BASE COUNT          373 a          631 c          607 g          390 t
ORIGIN      
        1 cactgcgaac agccacgccc gcagcctgct cggctgagtc agctcggaga ctttggctga
       61 ggcattgatg aaggtgttct gcacggcgtc ggccgcatcg gcgggctggg agagccggga
      121 ccggcagtag gtgtacaacc cctccccgta acgatcgtaa gctgtggaaa ctccagtaac
      181 atcgttcgca gcgatcgcgg ccaccacctc ggtgtggtcc acggaggtct cgctgacata
      241 catatgttca cggtatgacc ccgcggcgat ttctgccata acgccggacg ttacaggggc
      301 agtcgcctgc gcggcggtca gcctgcgtgg gtcccgcttc cgcatgccac ggagccactc
      361 tcgcacgatg accatgagga tccgccatcc gtcccggacg gcgcgaaggt tgctctcgcc
      421 ggaaatgcgg ggccattcgt agctcggcac ctcatagatc ttcagcccgg ccttggctgc
      481 ccggatgttc atcagcgtct cgacctcgaa gcctgggccg ctgccgagtt ccatcacgtc
      541 aagatgacga gcccagaatg cgttgtagcc atagcacagg tcggtaaagc gggtaccgaa
      601 catccggttg acgaggaagc tgagcaacca gttgccatag cgccgtacac cggtgatgtc
      661 gtcgctgcca ccgctactgg agaagcgcga gcccttcgca aagtcagcgc cggccagcaa
      721 tgcgccgacg aacctgatca tctcccgtcc gtcggtggat ccgtctgcat ctatcatcac
      781 gatgatttcg ccggtcgcgg ccgcgaatcc agcctgaagc gcgtctccct tgcccttgcc
      841 aggctgttcc accaccttgg cctccgggta caaggcccgg gttactgcta cggtgtcatc
      901 gacagaatgc ccatccacca agatgacttc gtccacccag ggtggcagtg tcgcgaagac
      961 atgcgcgaga ttagcggcct cgttcttggc gggtatgatg acgctcacgc tcggcacgat
     1021 tgcgagggtt tcggaaatcg gccgatacgg gagctcggtg cggggcgcgg ccggatctac
     1081 ggcgttcgtc tccagcgtga gcgaacgatc ccccgtaaag tcttgtacgt tcgtaaattt
     1141 cacctgtatc gcaacctaac caggacgcgt gcccgatcca gatctcctaa tcgaggtccg
     1201 aacaccgata ccctgccttc gtgcacattt ccctgtctag cgggaactgc ttgataaatg
     1261 tcgtcagctg agacgagtcg atcgtgatct gatgctgccc gcggctggtc gcatctcagg
     1321 ctgctcccac cccttgtaca gaatcgttgt aatcggttac cttaagtaat atccgtaccc
     1381 aggcgcgcat agcgccgtgc cgggccgggc agtcacagta cggcccatac atagaggacg
     1441 cccagcgatc gtaggtggtt cacacccata caagacgttt tagatggttg cagatggttt
     1501 ctcaaaaaat aggtggttgt cgtaggtgta gtgcggtatg ccccgatcgc gacctgccag
     1561 cgcatggtcg gccggatacc gggcggcggc ggcctcgagg gcccctgggc cgcattcatc
     1621 ggcgcggtca ggtcagggct gctggcgacg gtgctcacga gaactcatgc cgggcctctg
     1681 tggccgagga gaggatctca cgcttgtcag cgaagggccg gacagcgtcc gctgagtgag
     1741 ccctgtccgc ggcgatctcc gtcaccgcag tgtcttcggc tacttcgcgc tcgacactcc
     1801 ggtatccagc gcgctcaccc acgagctgac ggcttgcagc cgatccggcc ggctcatcga
     1861 agacctcgag aaggtcgtta cttctatacc agggcacatg atgggtggct ggcgcaggca
     1921 ggtcccggtg agctgacgga gaaccacttc gacgcccacc cgcttcacag gcaagtggtg
     1981 ccggacgccg tcaggcgtcc g
//
LOCUS       DASRPQ010001879         1062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1152358, whole genome shotgun sequence.
ACCESSION   DASRPQ010001879 DASRPQ010000000
VERSION     DASRPQ010001879.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1152358"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(278..532)
                     /locus_tag="VFD73_21330"
     CDS             complement(278..532)
                     /locus_tag="VFD73_21330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000184943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008219 - cell death [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Txe/YoeB family addiction module toxin"
                     /protein_id="HZI76513.1"
                     /translation="MKLVFAERAWEDYLYWQGADRKVLGRINHLIREILREPFSGIGK
                     PEPLRHALKGYWSRRITEEHRIVYKVEEDAVLLAQLRFHY"
     gene            complement(529..780)
                     /locus_tag="VFD73_21335"
     CDS             complement(529..780)
                     /locus_tag="VFD73_21335"
                     /inference="COORDINATES: protein motif:HMM:NF014643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008219 - cell death [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HZI76514.1"
                     /translation="MDSISYTAARANLAKTMDRVCEAHEPVIITRSGESSVVMLSLED
                     FNSLEETAYLLRSPKNAKRLLEAIAELEQGRGTERELVD"
BASE COUNT          185 a          345 c          320 g          212 t
ORIGIN      
        1 gtatcttacc cgaaggcggg caaggcggca actccgcccg ttcgaacgct ggaacgcgga
       61 cgtttaatcc ccgccgtcag gcggtcgctt acccgcatcc ggatctcact ttcctcgact
      121 cgcaagtgag gttcctgcgc ccagcagcca cttacctgcc gcggggaagt cctgttcctg
      181 cctccggaag cgactttcct gggcccgaaa gcgagtttcc tcggcccggg agagatttcc
      241 ccggacccgg gtctcgcttt ccgagcgcgg ggaatcgcta gtagtggaac cggagctggg
      301 ccaggaggac ggcgtcctct tcaaccttgt agacgatcct gtgctcttcc gtgatgcggc
      361 gggaccagta gcctttgagc gcatgcctca gcggctccgg cttgccgatc cccgagaacg
      421 gctcccgcag gatctcccgg atgagatggt tgatcctccc cagcaccttg cggtcggccc
      481 cctgccagta gaggtagtcc tcccaggcgc gctcggcgaa gacgagcttc aatcgacgag
      541 ctctcgctcg gtgccgcggc cctgctcgag ctcagcgatc gcttccagca gccgcttcgc
      601 gttcttgggg ctgcgcaaca ggtacgcggt ctcttccagg gagttgaagt cctccaggga
      661 gagcatcacg accgacgact cgccgctgcg agtgataatg acgggctcat gggcctcgca
      721 gacccggtcc atggttttcg ccaggttggc gcgcgctgcg gtgtaggaga tcgagtccat
      781 cgtgagtcac cccttctgta caggatactg tacaccaacc gggccaggat gtccacctga
      841 cacatcatgg ttgacgtcaa gcgttattga ggcgtaacat ccttcgcatg agcatcatct
      901 ccctgggagc cggcgccgga gcacggaagt ttcgggagct gatcctctat gtcgctcagc
      961 actccgagcc cgatccgaag ttcggcgcca cgaagttgaa caagatcctg ttctatgccg
     1021 acttcctggc ctatgcgacg ctcggagagg ccatcacggg ag
//
LOCUS       DASRPQ010001880         1042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3034395, whole genome shotgun sequence.
ACCESSION   DASRPQ010001880 DASRPQ010000000
VERSION     DASRPQ010001880.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1042
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3034395"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1038
                     /locus_tag="VFD73_21340"
     CDS             <1..1038
                     /locus_tag="VFD73_21340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76515.1"
                     /translation="GALPAALIVALSVNRKGIIRPNVFLCLVTLLAFEALITSLQPQH
                     IGTVYRTFRLAEFVAALWLLSPWWGRRDLLLVRCHLVSLSVVLGSVILGVLIFPGYAL
                     GGGRLGGVLWDVPATEVGHYAAVTIGLAVVLWFGGLLRGKATLIAVAINGVVLILTHT
                     RTALIALVAALLVAGLSLVIVRARVRRFIATATIIVSIVVVAAAGVITNWLARGQDAQ
                     QLASLTRRTDFWTLVLNLPRTKFQVFFGFGLSNGSVNGLPIDSNWLVAYLQQGLFGVI
                     VCAAMLLFLLVVAFFRPPSIERALALFLITYCLVASFTQVGFATVSIYLLELTLAASL
                     LVPSFAERRLE"
BASE COUNT          144 a          327 c          327 g          244 t
ORIGIN      
        1 ggagccctgc cagcggcgct gatagtggcg ctaagcgtga accgcaaggg catcatcagg
       61 ccgaacgtgt tcctctgcct ggtgaccctg cttgccttcg aagcgctcat caccagcctg
      121 caaccccagc atatcggtac ggtgtaccga acattccggc tggctgaatt cgttgccgcg
      181 ctctggctgc tttcaccgtg gtggggtcgg cgcgatctcc tcctggtccg ctgtcatctg
      241 gtgtcgctct ccgtcgttct aggttcggta atcctgggcg tgctgatctt ccccggctat
      301 gccctcggcg gcggaaggct cggcggtgtg ctctgggatg tcccagccac ggaggttgga
      361 cactacgcgg cggtaacaat cggattggcg gttgtgctct ggttcggggg gctgctgcgg
      421 gggaaagcca cgctgatcgc cgtcgcgatc aatggggtcg tgctcatcct cacccatacg
      481 aggaccgccc tgatcgcctt ggtggctgcc ctgctggtcg cagggttgag cctggtcata
      541 gtgagggcgc gggtccgcag gttcatcgcg accgccacca tcatcgtgtc gatcgtggtc
      601 gtggccgcgg ctggcgtgat cacgaactgg ctggcacggg ggcaggacgc acagcagctg
      661 gcctctctta cccgccggac cgatttctgg acgctggttc tcaacttgcc gcgcaccaag
      721 ttccaggtgt tcttcggctt cggcctgtcg aacgggtcag tcaatggcct ccccatcgat
      781 agcaactggc tcgtagccta tttgcagcag ggcctctttg gggtgattgt atgcgcggcg
      841 atgctgctat tccttctcgt ggtcgccttc ttccggccac ctagcatcga gcgggccctg
      901 gccctcttcc tgatcacata ctgcctggtc gcctcgttca cgcaggttgg attcgccacc
      961 gtctcgatat accttctcga acttaccctg gccgcatcgt tgctggtgcc ctcgttcgcc
     1021 gagaggcggc ttgaatgatg gg
//
LOCUS       DASRPQ010001881         1072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3981902, whole genome shotgun sequence.
ACCESSION   DASRPQ010001881 DASRPQ010000000
VERSION     DASRPQ010001881.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3981902"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..517
                     /locus_tag="VFD73_21345"
     CDS             <1..517
                     /locus_tag="VFD73_21345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76516.1"
                     /translation="QLEESLDRYERALAAATAPTPPVARGPFDSAEALADALLQNGMV
                     RGSPPTLVGPLDLVVVDDDVGGPYPPSPTDYVQRLLGPELIGRYSGGSRVVLIFAEPR
                     AWKGRSGLGAPSREALAHHAAGADLLVLFGHPRLLNELPTRGPVLLAWHRQRLMQEAV
                     ARWLSRRFIKP"
     gene            complement(507..>1072)
                     /locus_tag="VFD73_21350"
     CDS             complement(507..>1072)
                     /locus_tag="VFD73_21350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76517.1"
                     /translation="LIFKFDIAALEPMMRPFWVDRGLTLEEIGAIITSGRLIATVAGA
                     AAGGVFTSRYGIFTGLWVLGLVQACSSLGYWATAHAGGAKGLVVAAAYFESFAAGLGT
                     AAYLAFLMSVCEKRYAATQFAVLSALLALTRWIAGDFSGRLAEQVGYANYFLVTFFLG
                     LPAFALIPRLRHSQFENDELPVDSARA"
BASE COUNT          208 a          351 c          330 g          183 t
ORIGIN      
        1 tcagctcgaa gagtcgctgg atcgctatga gcgcgccctg gcggcggcaa cggcaccgac
       61 gcctccagtt gcacggggtc ccttcgattc agccgaagcg ttggccgacg cgctgctgca
      121 gaacggcatg gttcggggct cgccgccgac cctcgtgggt ccgctggatc tcgtggtggt
      181 ggacgatgac gtggggggac cctacccacc gagtccgacg gattatgtgc agcgtttgct
      241 ggggccggaa cttatcgggc ggtactccgg cggttccagg gtggtattga tctttgccga
      301 gccccgggca tggaaaggac ggtccgggct cggagctccc tcacgcgaag cactggccca
      361 tcacgctgca ggcgccgacc ttctcgtgct ctttggccac ccccggctcc tcaacgaact
      421 acccacccga ggaccggttc ttcttgcctg gcatcgtcag cggctgatgc aggaagctgt
      481 cgcccgctgg ctgagcagac ggttcatcaa gccctagccg agtctaccgg cagctcgtcg
      541 ttctcaaact ggctgtgccg aagtcgtgga atcagcgcaa aggccggaag acccaggaag
      601 aaggtgacca gaaagtagtt ggcgtatccc acctgttccg ccaggcgccc ggaaaagtct
      661 cccgctatcc agcgagtcag cgcgagcaag gcggagagca ccgcgaactg ggttgctgca
      721 tatcgcttct cacacaccga catcaagaac gccaggtacg cggcggttcc aagtcctgcc
      781 gcaaaactct cgaagtaggc tgctgcaacc acgagcccct ttgcccctcc ggcatgagcg
      841 gtggcccagt agcccagact ggagcacgcc tgaaccagcc cgagtaccca caggccggtg
      901 aagattccgt acctactggt gaacacgccg ccggcagcag caccggccac cgtcgcgatc
      961 aatcggccgg aggtaatgat ggccccgatc tcttccaggg tgagaccccg gtcaacccag
     1021 aacggacgca tcatcggctc cagcgccgcg atatcgaatt tgaagatcaa gg
//
LOCUS       DASRPQ010001882         4352 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_844203, whole genome shotgun sequence.
ACCESSION   DASRPQ010001882 DASRPQ010000000
VERSION     DASRPQ010001882.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4352
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_844203"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..349)
                     /locus_tag="VFD73_21355"
     CDS             complement(<1..349)
                     /locus_tag="VFD73_21355"
                     /inference="COORDINATES: protein motif:HMM:NF015662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76518.1"
                     /translation="MNGFDSYRVRERAEIARLVLIGAFLVLAGAFFRTQVIQHDKFQL
                     KAETNRLRPIPLTPPRGSILDRNGRVIAENVPGFSVKLLATSVDSLRAVLARVGRYVP
                     LDPAQISDIIDRYL"
     gene            complement(346..843)
                     /gene="mreD"
                     /locus_tag="VFD73_21360"
     CDS             complement(346..843)
                     /gene="mreD"
                     /locus_tag="VFD73_21360"
                     /inference="COORDINATES: protein motif:HMM:NF016019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HZI76519.1"
                     /translation="MSPQRVTRVQLLLVMLFLLALQFYLRPRLGNARVSPDFLLIGLM
                     LFAMRSGAGAGAVAGFLVGLIGDSLTPARFGAGALAHTLVGYFAAWGRALFFADNMLV
                     NAGFVAVGLWFRDLIVLMTSGTEHRQLFTELTLYSPLQALTTAGFALLVLITFRAWFS
                     IRLDA"
     gene            complement(840..1850)
                     /gene="mreC"
                     /locus_tag="VFD73_21365"
     CDS             complement(840..1850)
                     /gene="mreC"
                     /locus_tag="VFD73_21365"
                     /inference="COORDINATES: protein motif:HMM:NF016011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005618 - cell wall [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HZI76520.1"
                     /translation="MASISDRRYTRRDTVLFILCLGLSVLCLFSPVGWTYNLADTLRR
                     TVLAPLVWLQVRAEEGRTSRKRFRVVTAERDSAAYLAQFLPSLRAENERLRQLLKLSQ
                     RLKTSYVPAEVLHQPQATDGRTLLLSVGSRQGVAPFNPVVAPEGLIGLVLTATPYSSI
                     AMTWAHPEFRVSAFTVSGNALGVVAPSTEAGGGEGALELRGIPFRDSVPLGTLVLSSG
                     LGGVFPRGIPVGTVVGTIREEAGWERVYRLRPSANPGSTPHVMVLVNARSTDLANAFP
                     SDSMLEAMRQDSLARVHRADSLVQAAKAARAARRDSLAKSSPMLGGTPASAARSVKDS
                     TP"
     gene            complement(1853..2866)
                     /locus_tag="VFD73_21370"
     CDS             complement(1853..2866)
                     /locus_tag="VFD73_21370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HZI76521.1"
                     /translation="MSWLPANEIAVDLGTANTLVYVKGEGIVLNEPSVVAVEKATGRI
                     KGIGLEAKRMLGRTPDGILAVRPLKDGVIADFDVTEKMLRYFLKTIIDKHVFRVKPKV
                     IVCVPSGITEVERRAVRDSAETAGAKQVLMVAEPMAAAIGVGLPVETPTGNMVIDIGG
                     GTTEIAVIALSGIVSDTSIRTGGDELDQAIVQFMRKNYNLLVGEPTAEAIKIKIGSAA
                     PTGDEREMEVKGRDLVSGIPKTVRVHSTEIREAVQEPIQQIVDAVRRALEITPPELAS
                     DIVDRGIVMTGGGALIRGLDLLLAQETGLPIHVDEDPLTCVVRGTGRILDDYEKYRSV
                     LSA"
     gene            complement(2949..3371)
                     /gene="dut"
                     /locus_tag="VFD73_21375"
     CDS             complement(2949..3371)
                     /gene="dut"
                     /locus_tag="VFD73_21375"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF001862.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HZI76522.1"
                     /translation="MVEVLLSRLPHGNGLPLPSPATPGSAGYDLASADEGELAPLERK
                     LFRTGFSIALPDGYECQIRPRSGLALRHGITLPNTPATIDSDYRGELMVALVNLSRAV
                     PSDSGDADCSDDHRRGGAGGLPSGGSTASDVTRRWRFW"
     gene            complement(3391..>4352)
                     /gene="ald"
                     /locus_tag="VFD73_21380"
     CDS             complement(3391..>4352)
                     /gene="ald"
                     /locus_tag="VFD73_21380"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000286 - alanine dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HZI76523.1"
                     /translation="SAGAAILPTADDVWAQSEMIMKVKEPIAVEWPRMRRGQVIYTYF
                     HFAAAEDLTRAVIASGAVAVAYETVQLPSGELPLLTPMSEVAGRMAVQEGAKYLEKVF
                     GGSGILLGGVPGVAPAEVVIIGGGVVGINAAKMAAGLGAHVTILDISLDRLRYLDDVL
                     PSNVDTVYSNRHNILDAIRRADLVVGAVLLPGAKAPHLVKRADLKLMKPGSVIVDVAV
                     DQGGCVETIKPTTHENPTYFVDGILHYGVANMPGGVPRTSTLALANATLPYGLKLAKL
                     GWRAACKSDPSLRLGLNVVEGKVVYPGVAEAFRLPLTDVNTVV"
BASE COUNT          831 a         1409 c         1385 g          727 t
ORIGIN      
        1 gcagatagcg gtcgatgatg tccgaaatct gcgccgggtc gaggggaacg taccgaccca
       61 cgcgcgcgag aacggcgcga agagaatcca ccgaggttgc aaggagcttg accgaaaacc
      121 ctggtacgtt ctccgcgatc acacggccat tccggtcgag aatactgccg cgcggtggag
      181 tcagcgggat gggacgaagc cggttggttt cggccttcag ctgaaacttg tcgtgctgaa
      241 tcacctgggt gcggaagaac gccccggcca gaaccagaaa ggccccgatc agcaccagac
      301 gggcgatttc ggcccgctcg cgaacccggt aggaatcgaa gccgttcacg cgtccagccg
      361 gatcgagaac caggctcgga aggtgatgag aacgagaaga gcaaaaccgg cggtcgtgag
      421 cgcctgcagc ggactataga gcgtgagctc ggtgaacaac tgccggtgct cggttccgct
      481 ggtcatcaga actattagat ccctgaacca gagaccgacg gccacgaagc cggcattgac
      541 cagcatgttg tcggcaaaga agagtgccct gccccaggcg gcaaaatagc cgaccaaggt
      601 atgcgccaac gcgccggcgc cgaaacgggc gggcgtcagg gagtctccga tgagtcccac
      661 gaggaatcca gcaacggcgc cggccccagc cccgctccgc atggcgaaaa gcatcagccc
      721 gatgaggaga aagtccggac tgacccgcgc gtttcccagc cggggacgca ggtaaaattg
      781 cagcgccagc agaaagagca tcaccagcag gagctggacc cgggtgaccc gctgagggct
      841 cacggcgtgg aatccttcac actgcgggcg gccgacgcag gcgtgccgcc cagcatgggc
      901 gagctctttg ccagcgaatc ccggcgtgcc gcccttgcgg ccttggctgc ctgcaccaac
      961 gagtcagcgc ggtgcactcg ggcgagcgag tcctgccgca ttgcttcgag catcgaatcg
     1021 gagggaaacg cattcgccag gtcggtgctc cgggcattca ccagcaccat gacgtgcggc
     1081 gtggaaccgg ggttggccga cgggcgcagc cgatagaccc gctcccatcc ggcttcctcc
     1141 cggatggtgc cgaccactgt gccgaccgga atgccccggg ggaacactcc acccagaccg
     1201 gaagacaaca ccagggttcc gaggggcacc gagtcccgaa agggtatgcc tctgagctcg
     1261 agcgcaccct ctcccccacc ggcctcggtg gatggcgcga ccacgccgag tgcattgcca
     1321 cttaccgtaa aggcgctcac ccgaaattcg gggtgggccc aggtcatcgc gatgctgctg
     1381 tatggcgtgg ccgtgagcac caagccgatc agtccctccg gcgccaccac cggattgaac
     1441 ggggccacgc cctgtcgtga gccgacgctc agcagcaggg ttcggccatc ggtggcctga
     1501 ggctggtgca gcacctcggc ggggacgtag ctcgtcttca gccgctgact cagcttcagc
     1561 agttggcgca gccgctcgtt ctcggcgcgg agcgatggga gaaattgggc caggtatgcg
     1621 gcggaatcgc gctctgcggt caccacgcgg aatcgcttgc gactggtccg gccctcttca
     1681 gcccggacct ggagccacac caacggtgcc aggacggtgc gccggagcgt atcggccagg
     1741 ttgtaggtcc acccgacagg cgagaacagg cacagaacag aaaggccgag acacagaatg
     1801 aacaacacgg tgtctcggcg ggtgtagcgg cggtctgata tactggccat gctcaagctg
     1861 agagaacgct gcggtatttc tcgtagtcgt cgaggatcct gccggtgccg cgaacgacgc
     1921 aggtcaaggg atcttcatca acatggatgg gaagaccggt ttcctgggcc agcaggaggt
     1981 ccagtccgcg gatcagcgcc ccgccgccgg tcatcacgat acctcggtcg acgatgtcgc
     2041 tggccagttc gggcggggtg atctcgagcg cccggcggac cgcatccacg atctgctgga
     2101 ttggctcctg aactgcctct cgaatctcgg tggagtgcac ccgcaccgtc ttgggaatgc
     2161 cggagaccag gtcgcgaccc ttgacctcca tttcccgctc gtcacccgtt ggtgccgcgg
     2221 agccgatctt gatcttgatc gcttcggcgg tgggctcgcc gaccagcagg ttgtagttct
     2281 tgcgcatgaa ctgcacgatg gcctggtcca gctcatcccc gccggttcga atcgaggtat
     2341 ccgagacgat cccggaaagc gcgatgaccg cgatctcggt ggtgccgccg ccgatgtcga
     2401 tgaccatgtt tccggtcgga gtctcgaccg ggagccccac cccgatggcg gcagccatcg
     2461 gctcagccac catcagcacc tgtttggccc cggccgtctc ggccgagtcg cgcacggcgc
     2521 ggcgctccac ctcggtgatg ccggagggga cacacacgat caccttcggt ttgacccgaa
     2581 agacgtgttt atcaatgatg gtcttgagga agtagcgaag catcttctcg gtcacgtcga
     2641 agtcggcgat gacgccgtcc ttcaacgggc gaaccgccag aattccatcc ggcgttctcc
     2701 ccagcatccg cttggcctcg agcccgattc ccttgatcct cccagtcgcc ttctccaccg
     2761 ccacgaccga tggctcattg agcacaatgc cctcgccttt gacatagacg agggtgttgg
     2821 ccgtgccgag atcgaccgcg atttcgttcg cggggagcca ggacatcaga ttcaacgcgg
     2881 gaactttcat cggagcgccg ttaggcacat ggctggtgaa ggtaaatgaa ctggctcacg
     2941 ccccgctact accaaaaccg ccagcgcctc gtgacgtcgg aggcagtgct tccaccgctc
     3001 ggaaggccac ccgctccacc gcggcgatga tcatctgagc aatccgcatc ccccgagtca
     3061 ctcggaacgg ctcggctcaa gttgaccagc gccaccatca actccccgcg ataatcgctg
     3121 tcgatcgttg ccggggtgtt cggcagggtg atgccgtgtc gcagggccaa gcctgacctc
     3181 ggccgaatct ggcactcgta tccatcggga agcgcgatac tgaacccggt cctgaacagc
     3241 tttcgctcca gtggtgccag ctcgccttcg tccgcgctgg ccagatcgta gccagccgat
     3301 cctggggttg ccgggctagg gagcggaaga ccgttgccgt gagggaggcg ggagagcagc
     3361 acctcgacca ctggcttcga tgcgacccgc tcagacaacg gtattgacgt cggtcagcgg
     3421 aagccggaac gcctcggcca cgccggggta gacaaccttg ccctcgacca cgttgagacc
     3481 gagccggagc gagggatcgg acttgcacgc cgcacgccag cccagcttgg cgagcttaag
     3541 tccgtatggc agcgtagcat tggcgagtgc gagggtggag gttcggggca ctcctccagg
     3601 catatttgcg acgccgtaat gcagaatgcc gtcgacgaag taggtaggat tctcgtgggt
     3661 ggtcggcttg atcgtctcga cacacccgcc ctggtcgact gcgacgtcta cgatcacgga
     3721 cccgggcttc atcagcttga ggtcggcccg tttgaccagg tggggtgcct tggcgccggg
     3781 caataacacg gcccccacaa ccagatcggc ccgccggatg gcatccagga tgttatggcg
     3841 gttggaatag acggtatcga cgttgctcgg caggacgtca tccaggtaac gcagccggtc
     3901 gagcgagatg tcgagaatag tgacgtgagc cccgagaccg gcggccattt tggccgcgtt
     3961 gatgcccacc accccgccac cgatgatcac cacctccgcc ggtgccacac ccggaacgcc
     4021 acccaggagg ataccgctcc cgccgaacac cttctccagg tatttcgctc cttcctgcac
     4081 cgccatccgg ccggcgacct cggacatcgg agtcagcagc ggcagctcgc cgctgggaag
     4141 ctgtaccgtc tcgtacgcca cggcgacggc tccggaggcg atgaccgcac gggtgaggtc
     4201 ctcggccgcc gcaaagtgga agtaggtgta gatgacctgg ccccgtcgca tgcgcggcca
     4261 ctccactgcg atcggctcct tcaccttcat gatcatttcg gattgggccc acacgtcgtc
     4321 cgctgtgggc aaaatggcgg cgccggcgga gc
//
LOCUS       DASRPQ010001883         1386 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3982029, whole genome shotgun sequence.
ACCESSION   DASRPQ010001883 DASRPQ010000000
VERSION     DASRPQ010001883.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1386
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3982029"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..199
                     /locus_tag="VFD73_21385"
     CDS             <1..199
                     /locus_tag="VFD73_21385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76524.1"
                     /translation="ARAGAAFSALAQRGWSHEWAPSVPRQSRGPLPLAAPPGLVAAAG
                     QILWPPEGNFHGRIWADRTGH"
     gene            236..898
                     /locus_tag="VFD73_21390"
     CDS             236..898
                     /locus_tag="VFD73_21390"
                     /inference="COORDINATES: protein motif:HMM:NF044569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76525.1"
                     /translation="MPVQTTNLFLLQDLEDVSRTEDLAESDREALQAVAGWIKTFVAR
                     PHKDLGRAGTVCPFVPGSLERKVLWLAPEQIAGRDEPDVVELVSGYKRLFLETQPTGG
                     DDADYKVIVVVFTDLPADRAQGVFDDVLQHLAVPSYADDGIVFGPFYEGNEGTALYNP
                     RFRPFQSPVPFLFVRQGVISDWKFFLDNQEWLNLWACRYGESAVQALAEELRRTNWRQ
                     LG"
BASE COUNT          242 a          456 c          443 g          245 t
ORIGIN      
        1 cgcgagggcc ggtgcggcct tctcggccct cgcccagcgg ggctggagtc atgagtgggc
       61 gccgagtgtc ccgaggcagt ctcgcgggcc gctcccactg gcggcgccac ccggcctggt
      121 ggccgccgct ggccagatcc tgtggccgcc agaaggcaac tttcacggcc gcatctgggc
      181 agatcgtacg gggcactgac accattttct tcggctctct tcaggagaag gttccatgcc
      241 agtacagacc actaatctct tcctgctcca ggatctcgag gacgtcagca ggacggagga
      301 cctcgcggaa agcgaccgag aagcgctgca agccgtcgcc ggctggatca agaccttcgt
      361 ggccaggcct cacaaggatc tcggtcgcgc tgggaccgtc tgtcccttcg tgcctgggtc
      421 gctggaacgc aaggtcctgt ggctcgctcc cgagcagatc gccggccggg acgagccaga
      481 cgttgtcgaa ctcgtcagcg gctacaagag actgttcctg gagacgcaac ccactggcgg
      541 cgacgatgct gactacaagg taatcgtcgt tgtcttcacc gacttgccag ctgatcgtgc
      601 ccagggcgtc tttgacgacg tcctgcagca tctggccgtt ccgtcgtatg cggacgatgg
      661 aatcgtgttc gggccgttct atgagggcaa cgaggggact gcgctttaca acccgaggtt
      721 ccggccattc caatcgcccg tgccgtttct gttcgtgagg cagggagtga tcagcgactg
      781 gaagttcttt ctggacaacc aggagtggct caacttgtgg gcgtgtcgct acggagagtc
      841 cgcagtccag gcccttgctg aggaactgcg ccgcaccaac tggagacagc tcggatagcg
      901 atgcggccgt cggaacacgc atgaatcaat cgagggcgcg gccttgccaa tctgaggtcc
      961 gcaacagaag tcccaggcgc cccgtccgcg cctgagcgca agtcaaccgc ctcagccgga
     1021 ccctgcccgg cgcggacgcg atcacgccga cgcgcggcgg ctccaccagc tggccagctc
     1081 ggacacggtc aaagcccgcg cggccgccct gtccgcgcag ggctgcaggc ccgcggcccg
     1141 ctggaacttg acctcggcgg ccgcatcggc tccctgttat aagagaatca gtcgcggcag
     1201 tgttcgagcg ctggccggac gggctgctgg ccacggctcg cgttgaccac gacgtggaaa
     1261 tggaagcacc tgtcaacgct cctgaaaggc ccagttatga ccatccggcg gatcagttcc
     1321 ggccctggac taccggcagg cttccccttc agccttgcca gcgagcacaa cggcgtcttg
     1381 tatatc
//
LOCUS       DASRPQ010001884         1324 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4612213, whole genome shotgun sequence.
ACCESSION   DASRPQ010001884 DASRPQ010000000
VERSION     DASRPQ010001884.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1324
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4612213"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(481..762)
                     /locus_tag="VFD73_21395"
     CDS             complement(481..762)
                     /locus_tag="VFD73_21395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76526.1"
                     /translation="MTASTGKSPRGEDVARPPRTERIAQPTERITVALIPKAGEDLQR
                     LQERTSLSKTDITNRAITLYEFIDAQLRAGRDVLIRDGKTGETQLVRIL"
BASE COUNT          262 a          421 c          410 g          231 t
ORIGIN      
        1 cgccgcgaga agcaggaagc cggcctcacg cctgaccgag ccgggcgggc cgggcaagca
       61 gacggagcac cccatatctg gccgccctca agagaggagg gctatacgcc gaaagaacaa
      121 aagcgcccta ccccgctaaa gcggagtcgg gcctaccccg accaagcagg aggaccatac
      181 ccagcaagaa gacaagcgcc atccccgcag cagaggaggg cctgaccagc agaagaggag
      241 ggcctgacca ccgccagcag atcaggaccc atgtcgccaa gcagaggagg gctataccca
      301 gcaagaagat aagcgccatc ccccgcacaa gaggagggcc tgacctccgc caggcaggtg
      361 aggaccatcc ccccgccaag aaaaagtggc ctcccgccca caatgggcgg gaggccactt
      421 gcgtctgccc cgatccggcc gacgcagctt gccggtatca accggcgccg ctggccggta
      481 tcaaagaatc cggacgagct gggtctcccc cgtcttgccg tccctgataa gaacgtcacg
      541 gccggctcgt agctgggcgt cgatgaactc gtacaaggtg atcgcgcggt tggttatatc
      601 ggtctttgac agtgacgtgc gctcctgaag gcgctggagg tcctctccgg cctttgggat
      661 aagtgccact gtgatccgct cagttggctg ggcaatccgc tcggtgcgcg gcggacgggc
      721 aacatcctcg cctctggggc ttttacccgt gctggcagtc atagggtgtt gcactccttc
      781 cagctttctt tgtgtattgc agcgtgactc ctgtgagctg tgcttttctc ctgacttgaa
      841 gctggaccag ggtagttgtg tgataaggca gttcacgtta ggcgaaccgt cctcatccgt
      901 tgcgaccgaa gccgcccccg ttgcccgtac tgtagctcag tattgcatac agtgcaagac
      961 taatccctgc tgtatgaaca gactcaaagc gcgagcacag cacgatcgaa ctgtactttc
     1021 cctggaacca gacatgtaac cgagacctga tgaggcatta ttccccggcc cggaacggcg
     1081 gttccacgac ggcatccgca gcgcccgggc ccggcgctga ccagcgatgg cgcggtgcgg
     1141 cggcggccgg attcgggtcg ccgtggccgg agccttaatg ccccgggttt gcctcggccg
     1201 ggccgcccat acccgtgcca tggccccggc ggaggcagcg ggcgcatgcc gtcatcgagg
     1261 gcctgcgtat cgcatggagg tctttttggg cgccttttct gaatgactgt caatcgtttg
     1321 caga
//
LOCUS       DASRPQ010001885         1151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3982157, whole genome shotgun sequence.
ACCESSION   DASRPQ010001885 DASRPQ010000000
VERSION     DASRPQ010001885.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3982157"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..678)
                     /locus_tag="VFD73_21400"
     CDS             complement(13..678)
                     /locus_tag="VFD73_21400"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HZI76527.1"
                     /translation="MEFLLFGHAGRPMIVFPTTQGRFYQFEDFLMIESLRWRLEGGEI
                     QILCLDGIDGETWYNRGISVYDRAMRHNAYEQYIIQELLPWFSERNWGVRDNLVATGA
                     SFGAYHAVNFSFRHPELVKKIVAMSGAYSLKFLIHGDWNQEEYFNSPLDYVPNLHDDW
                     FLSRMRGQEIILATAWDDICLDATRAMSQVLWDKAVPNLLDIWNGWHDWPLWRDMAVK
                     FLY"
BASE COUNT          227 a          388 c          326 g          210 t
ORIGIN      
        1 tgctgccggc tctcaataca ggaacttgac ggccatgtcc cgccacagcg gccaatcatg
       61 ccagccgttc caaatatcca gtaaattggg caccgcctta tcccagagca cctgggacat
      121 ggcccgtgtc gcgtccaggc agatgtcatc ccacgcggtc gcgagaatga tctcctggcc
      181 gcgcatgcgc gacaggaacc aatcgtcgtg cagattgggc acataatcga gcggcgagtt
      241 gaaatactct tcctggttcc aatcgccgtg gatcaagaac ttcaggctat aggcgccgct
      301 catcgccacg attttcttga ccagttcggg atgccggaag ctgaaattga ccgcatggta
      361 cgcgccgaag gacgcgccgg tcgccaccag gttatcgcgc acgccccagt tgcgttcaga
      421 gaaccagggt agcagttcct ggatgatgta ctgctcatac gcattatgcc gcatagcccg
      481 gtcgtagacg gagatcccgc ggttatacca ggtctcgcca tcgatcccat cgagacacag
      541 gatctgaatt tccccgccct ccagccgcca gcgcagggac tcgatcatca ggaaatcttc
      601 aaactggtaa aagcggccct gggtcgtggg gaagacaatc atgggtcgcc ccgcgtgccc
      661 gaacagcagg aactccatgt cccgccctag acggtggctg taccacttgt ggtactctcg
      721 attcatcggc ctccccggtc ctttacctca ccggtccgcg cagcgcggcc cgacatccac
      781 acagtcgtcg aggcatggcg gccacctccg gccggcgcct ggctgattgt agcatgttta
      841 ccaggcagcc gcaagaatag gcggcgcggg cctaaccgcc cctgcccctt tcccggcgcg
      901 ggcatgggga acggcaccgc agaccaacct aacccccctg ccccccttcc cgcggcggga
      961 agggggaacg gcaccgctgc gtgaacagca ctcggcactc gtcggatcgg gcaaggggac
     1021 agatgtgctc ctcgtgctcc tcgtactcag cactcagcac tcgtccggct gcccgtcggc
     1081 agaagagcgt tagcacattg cgggccgcca tttacgtgcc gtcccacctc tcggcgcccg
     1141 agcttagatg g
//
LOCUS       DASRPQ010001886         2537 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3982224, whole genome shotgun sequence.
ACCESSION   DASRPQ010001886 DASRPQ010000000
VERSION     DASRPQ010001886.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2537
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3982224"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1897
                     /locus_tag="VFD73_21405"
     CDS             <1..1897
                     /locus_tag="VFD73_21405"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HZI76528.1"
                     /translation="VAYTVTLPDTVKDEPNRDLWMTSWDGRRTVRLTTSPSSEGTPRW
                     SPDGRYLAFLSSRGDARDAAQVWLLDRAGGEAERLTDLPGGVSAYAWSPDSKRLALIA
                     SDPSPDSARSDTSHRSSPKPIVIDRFQFKEDETGYLDQRRSHLYIFDLASRKAELITA
                     GAYNEVMPAWAPDGKSIAFVSKRGADLDRTNNWDLYVVAAAPGATAKQLTTFDGPDMD
                     PGWGGRPPAWSPDGRYIAYVQGGPQKLIYYAGQKLAVVPVAGGAAKVVTPTLDRNVLS
                     PQWSTDGSSILFLLEDDRVTQLARVSAQGGAVQTITQGRRFVSDYSVAPDGKIAVLAS
                     TQSAPAEVFALDGSNLRPLSRQNDGWLARVQLASVEEISFKSRDGTPINGFLVRPPGY
                     REGSKVPTVLRIHGGPVYQFSNEFFFEWQLLAANGFAVVAANPRGSSGRGEKFSLAIW
                     ADWGNKDSQDVLAAVDYAIARGVADPSRLGVGGWSYGGILTNQVIARDQRFKAAISGA
                     GQSNALAGYGTDQYVREYEAELGKPWANSDTWIRVSYPFFHADRIVTPTLFLCGDKDF
                     NVPLLNSEQMYQALKSLGRETQLVIYPGEYHEIRRPSFERDRLQRYVEWYDRYLRQPR
                     AEQAATH"
     gene            1914..2276
                     /locus_tag="VFD73_21410"
     CDS             1914..2276
                     /locus_tag="VFD73_21410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76529.1"
                     /translation="MTAAMAVMLCSGCAKHPPANASPDAAAEIALVVENHHWSDVIVW
                     VVHDGVAERIGTAPAVQTSSFFIANRKLGNSGLIQLRGRPVGSPEYHTTESFLIRAGQ
                     EIQWTLESDLTRSSVAVH"
     gene            complement(2278..>2537)
                     /locus_tag="VFD73_21415"
     CDS             complement(2278..>2537)
                     /locus_tag="VFD73_21415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76530.1"
                     /translation="GLGSVGGLSGPALLAAIMTEKYIRTIQNPEAWSDYRRTCIPPLA
                     PAPGSTFIPGRLTYPLSEQNANTSISSGGPLRNWNDPNPCP"
BASE COUNT          466 a          760 c          843 g          468 t
ORIGIN      
        1 ggtcgcctac acggtcacgt tgcccgacac ggtaaaagac gagccgaatc gcgatctctg
       61 gatgaccagc tgggatggtc gtcgcaccgt ccggctcacg acctcgccgt ccagtgaggg
      121 gacaccgcgc tggagcccgg atggtcgcta tctcgccttc ctttccagca gaggggatgc
      181 tcgagacgcc gcccaggtct ggttgctcga tcgagccggc ggcgaggcag agcggctgac
      241 cgaccttccc ggaggagtat cggcgtacgc ttggtctcct gacagtaagc ggcttgcgct
      301 gatcgcgagc gatccttctc ctgattcggc ccgcagcgac acgagccatc gcagctcccc
      361 gaagccgatc gtgatcgacc gctttcagtt caaggaggat gaaaccggat atctggatca
      421 gcgccggagt catctctaca tcttcgatct ggccagcagg aaggccgagc tgatcacggc
      481 gggtgcctac aacgaggtca tgccggcctg ggcgcctgac ggcaagagca tcgcattcgt
      541 gagtaaacgc ggggccgatc tcgatcgcac gaacaattgg gatctctacg tcgtggcggc
      601 ggcgccgggc gccacggcaa agcagctcac cacgttcgac ggaccggata tggatccggg
      661 ctggggtgga aggccgccgg cctggagtcc ggatggcagg tatatcgcct acgtgcaagg
      721 tggaccccag aagctgatct actacgccgg ccagaagctg gcggtagtgc ccgtagccgg
      781 cggggcggcc aaggtggtca cgcctacgct cgatcgcaat gtgctctcgc cccaatggtc
      841 cacggatggg tcgagcatcc tctttttgtt ggaggacgac cgggtaacgc agctggcccg
      901 ggtgtcggcg caggggggag cggtgcagac gatcacccag ggaagaaggt tcgtcagcga
      961 ctacagcgtg gcacctgatg gcaaaatcgc tgtgctggcc agcacccaga gtgcacccgc
     1021 tgaagtcttt gccctggatg ggagtaatct ccggccactt tcccggcaga acgatgggtg
     1081 gctcgcgcgg gttcagctcg catcggtcga ggaaatctcc ttcaagagcc gcgatggcac
     1141 tccgatcaat ggtttcctgg tgcgaccacc cggctaccgg gagggcagca aggttcccac
     1201 ggtgctccga atccatggag gaccggtcta tcagttctcc aatgagtttt tcttcgagtg
     1261 gcagctgtta gccgcgaacg gattcgcggt cgttgcggcc aacccgaggg gaagctccgg
     1321 ccggggagaa aagttctcgc tcgccatttg ggcggattgg ggtaacaagg acagccagga
     1381 cgttcttgcg gccgttgact acgccattgc acgcggcgtc gcagatccga gccggttggg
     1441 ggtgggcggc tggagctatg gagggatcct gaccaatcaa gtgatcgccc gggaccagcg
     1501 gttcaaggct gcgatcagcg gggcggggca gtccaacgcg ctcgccggct acggcaccga
     1561 tcaatacgtt cgagagtacg aggccgagct ggggaagccg tgggctaata gcgacacgtg
     1621 gatccgggtg tcctacccgt tctttcatgc cgaccggatc gtcaccccga cgttgtttct
     1681 ctgcggcgat aaggacttca atgtgccgct gctcaactcg gagcagatgt accaggcgct
     1741 taagagtctc ggtcgggaga cccagctggt catctatccg ggggagtacc acgaaatccg
     1801 gcgacccagc ttcgagcgcg accgcctgca acgctacgtg gaatggtatg accgatatct
     1861 ccggcagccc agggccgagc aggcggcgac tcactagctc cgctcgggcc gtcttgaccg
     1921 cggccatggc ggtgatgctc tgcagtggct gcgctaagca tcccccggcg aatgcctctc
     1981 ctgacgccgc ggcggagatt gcgctggtag tcgaaaatca tcactggagc gatgtgattg
     2041 tctgggtggt acacgacggt gttgcggagc ggatcgggac cgctcccgcg gtccagacct
     2101 ccagcttctt catcgcaaac cggaagctgg gcaattccgg gcttattcaa ctgcgtgggc
     2161 ggcctgtggg ttcacccgag tatcacacta cggagagctt cctcatccga gccggccagg
     2221 agatccagtg gacgctggag agcgatctga cgcgctccag cgtcgcggtg cactagatca
     2281 gggacagggg ttcgggtcgt tccagttccg cagtggccct ccgctcgaaa tgctggtgtt
     2341 cgcgttctgc tcgctcagcg ggtaggtcag ccgtcccggg atgaaggtcg atccaggggc
     2401 tggagccagc ggcggaatac aggtacgccg ataatcgctc caggcctcag ggttttggat
     2461 ggttcggatg tacttctccg tcatgatggc cgccagcaag gccggcccgc ttaggccacc
     2521 cacggagccc agacccg
//
LOCUS       DASRPQ010001887         1991 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3982975, whole genome shotgun sequence.
ACCESSION   DASRPQ010001887 DASRPQ010000000
VERSION     DASRPQ010001887.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1991
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3982975"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(5..1543)
                     /locus_tag="VFD73_21420"
     CDS             complement(5..1543)
                     /locus_tag="VFD73_21420"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family transcriptional regulator"
                     /protein_id="HZI76531.1"
                     /translation="MDQPEVGRDRHSQIRRLIAEMEPVRIIVEGQFSALAMLITDASL
                     ASDEPALVAAQDGLQWLYSRQEALPEPDDDQVEQRGRLLGLIDVTHWALRRLPSTLHV
                     GPDLASHAGQFLKAVAEHPGLSNQELATRLGIDETEASRVGRRLLAAGVVWRRKEWRR
                     NAWDITPRGRKCLVNAGLATADTQQPDLDFAVGVTMRPHRLVGAVVDASAKQLAAAPR
                     DLEPAADPASRVDALGALVRSLIAGVVGADEYPPDRIGLGVQVTGHVAAASGEVTLAP
                     EYGPPGIWDDFPLQEQLQKAIALPAVIENDANVLAEYEYVYGEGRECQSLVAIVLDEG
                     IRCGVIADGRLIRGIGGQAGEIGHLVVQPGGRSCHCGSQGCLDSVASTAAIPEVFDEL
                     AGRGIPAASDLATVMKYFEKGDEHAAAALYQAGSALGVAISMLLRLINPERLVLFGPD
                     ELVCESRSPAAERFMSGVRESGLEHAASIAAGNCTLVSKAYDDETGAHAAAAVALLRA
                     KDQS"
     gene            complement(1766..>1991)
                     /locus_tag="VFD73_21425"
     CDS             complement(1766..>1991)
                     /locus_tag="VFD73_21425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76532.1"
                     /translation="VSSSRFPREPGAATSPYLAGRLVILRRHRDDALVPVVRRPARQL
                     RAPGSFRGQGLRTGLTFAVVGASPAGVVVR"
BASE COUNT          350 a          673 c          620 g          348 t
ORIGIN      
        1 ccggctacga ctggtccttc gcccggagca aggcgacggc ggcggcggca tgggctccgg
       61 tttcgtcgtc gtaggccttg gaaacgagag tgcagttgcc agccgcgatg gaagccgcgt
      121 gctccaagcc ggactcgcgc acaccggaca tgaaccgctc ggcggccgga gagcgggact
      181 cgcacacgag ctcgtccggg ccgaagagca cgagcctttc cggattgatg agccgcagga
      241 gcatggatat ggcgacgcct agggcgctgc cagcctggta gagggccgcg gctgcatgtt
      301 cgtcgccctt ttcgaagtac ttcatgaccg tggcgaggtc ggatgccgca gggatgcctc
      361 ggccagccag ctcatcgaag acctccggga tggccgctgt actggccaca ctgtccaggc
      421 agccctggct gccgcaatgg cagctgcgac ctcctggctg gactactagg tgcccgatct
      481 cgcccgcttg cccgccgatc ccgcggatga gccgtccgtc cgcgatcacg ccgcacctga
      541 tgccctcgtc aaggacgatg gccaccaggg actggcactc ccggccctcg ccgtagacat
      601 attcgtattc ggcaagaacg ttcgcatcgt tctcgatcac ggccgggagc gcaatagcct
      661 tctgcagctg ctcctggagc ggaaaatcgt cccaaatgcc aggcggcccg tactcaggcg
      721 ccagcgtgac ctcaccgctg gctgccgcta catggccggt tacctggacg ccaagcccga
      781 tacggtccgg cggatactcg tccgcgccga cgacaccggc gatgaggctc cggacgaggg
      841 ccccgagcgc gtccacccgg ctggccggat cggccgccgg ctccagatca cgaggagccg
      901 ccgcgagttg cttcgcgctg gcatcgacga cggcaccgac caaccggtgc ggccgcatcg
      961 tcactccgac ggcgaaatcg aggtccggct gctgggtgtc cgctgtggcc aggccggcgt
     1021 taacgaggca cttacggcca cgcggggtga tgtcccaggc gttgcgtcgc cactccttcc
     1081 gccgccacac gaccccggcc gccagcagcc ggcgcccgac ccggctggcc tcggtctcgt
     1141 cgatacccag acgcgtggcc agttcctgat tggacagccc tgggtgctcg gccacggcct
     1201 tgaggaactg gccggcgtgg ctggcgaggt caggacccac gtgaagggtg gacggcaggc
     1261 gacgcagtgc ccagtgcgtg acgtctatca ggccaagaag ccggccgcgc tgctcaacct
     1321 ggtcgtcatc cggttcgggc agcgcttcct gcctgctgta gagccattgc agcccatcct
     1381 gcgctgccac gagggcaggc tcgtcggatg cgagcgaggc atcggtgatc agcatggcca
     1441 gggcgctgaa ctgaccctcg acgatgattc tgaccggctc catctcggcg atcagccgcc
     1501 gtatctggga atgccggtcc cggccgactt ctggctggtc caccgctgtc tcctctaccg
     1561 gagccttagc tcaaggcttg cctcttccgt aaagctgatc catctccttc atggtgccgc
     1621 gatgtcaagt gaatgtcaag tgatgtttcc cacacttcag caccgcagga gactctcatc
     1681 tccgcccatg taaataacag tatttcatac tagtttcagt aaacattata atttttaatg
     1741 ataatcgaat cttaattcga ttacctcatc tcacgaccac tcccgccgga ctcgctccca
     1801 cgacagcgaa ggtcaggcct gttcttaagc cctggccccg gaaggaaccg ggagcgcgga
     1861 gctggcgggc tggccggcga accaccggga ccagggcgtc atctcggtgg cgccgtaaga
     1921 tcaccagcct tccagccaga taagggctgg tcgccgctcc cggttccctc ggaaagcgag
     1981 aagagctaac a
//
LOCUS       DASRPQ010001888         1379 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2406357, whole genome shotgun sequence.
ACCESSION   DASRPQ010001888 DASRPQ010000000
VERSION     DASRPQ010001888.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1379
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2406357"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="VFD73_21430"
     CDS             complement(<1..383)
                     /locus_tag="VFD73_21430"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HZI76533.1"
                     /translation="MAVVTRSVWSSPAQPEELQPFRIRGGTRGCLLIHGFAGTPPEVR
                     GLGSYLAARGYDVIGPLLAGHGITPEAMALTRWPDWFRSVEAALSTLRRDCKDIFVGG
                     QSLGGTLALHLAATHPELKGVIAMGA"
     gene            500..820
                     /locus_tag="VFD73_21435"
     CDS             500..820
                     /locus_tag="VFD73_21435"
                     /inference="COORDINATES: protein motif:HMM:NF018058.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapA family protein"
                     /protein_id="HZI76534.1"
                     /translation="MSIVGWLVALLLGIVLALFSVGNQQSATINVLGSSYQEIPTWVV
                     MLSSAALGALMVLVISLVDRFRWFMSSRFTKKVLTEHKRMIIQRDNRIAELEQEVLRL
                     RGAA"
     gene            828..1247
                     /locus_tag="VFD73_21440"
     CDS             828..1247
                     /locus_tag="VFD73_21440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76535.1"
                     /translation="MLKACPQCGYRYNAPENQTCGKCKGWLGGVTTAAVAAGPPPSTS
                     LVPRSPRELACYLPVPIGALLGFPNPIGAAFGLLMAALLIKVVRLDMERFSKGLLIGI
                     VIAGVFFVYLIFLLIFSFLYNLLEPVLQSLVGRSFKH"
BASE COUNT          219 a          450 c          448 g          262 t
ORIGIN      
        1 gcgcccatgg cgatcacgcc cttgagctcc ggatgcgtgg cggccaggtg gagcgccagc
       61 gtgcctccca gggattggcc gcccacgaag atgtccttgc aatcgcggcg cagcgtactg
      121 agagcggcct cgaccgagcg gaaccagtcc ggccagcggg tcagagccat ggcctcggga
      181 gtgattccgt gaccggcgag taacggtccg atgacgtcgt agccgcgggc cgcgaggtac
      241 gagccgagtc cgcgcacttc cggcggcgtt ccggcgaacc catggatcaa caggcagcct
      301 cgggtgccac cgcggatgcg aaatggttgc aactcctccg gctgggcggg cgagctccac
      361 accgatcgcg ttaccaccgc catcaattcg aagtctatcg gcccgcaagt tcgatcctcc
      421 tggctcggtt atatgggccg gcgaggtgtc gccaccggtc cccgaaccgg gtgaccgtaa
      481 ctggggggtg aactagcgct tgtcgatcgt cgggtggctc gtcgcactgc tgctgggcat
      541 cgtgctcgcc ctcttttcgg tggggaatca acagtcggcc accatcaacg tgctgggcag
      601 cagctaccag gagattccca cctgggtcgt gatgctgtcg tcggcggcgc ttggcgccct
      661 gatggtgctc gtcatcagcc tggtcgaccg gttccgctgg ttcatgagtt ctcggttcac
      721 caagaaagtg ctgaccgagc acaagcggat gatcatccag cgcgataacc ggatcgcgga
      781 gctggagcaa gaagttctcc ggctccgagg cgccgcctga ggcactgatg ctgaaagcct
      841 gcccgcagtg cgggtatcga tacaacgcgc ccgagaacca gacgtgtggg aagtgcaaag
      901 gctggctggg cggcgtgacc acagccgcgg tggcggccgg tccgcccccg agcacctcgc
      961 tcgtcccccg atcgcccagg gagctggcct gctacctacc ggtgccgatt ggcgcgctgc
     1021 tcggctttcc gaaccccatc ggggcagcct tcgggctgct gatggccgcg cttctgatca
     1081 aggtggtccg gctcgacatg gagcggttct ccaagggatt gctgatcggc atcgtgatcg
     1141 cgggcgtctt cttcgtctac ctgatcttcc tgttgatctt cagctttctc tacaacctgc
     1201 ttgaacccgt ccttcagtcg ctagtagggc gcagcttcaa gcactaggcg ccgccgccgg
     1261 tgaggtcgcg ccgcctcctc gcccatacag tcctcgttat cgtcctggtg gtggcagcca
     1321 ttcccgcaat cctcggtccg gggaggtcca atccgcaagc agcggccgcg gtcgttcgt
//
LOCUS       DASRPQ010001889         1300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1492793, whole genome shotgun sequence.
ACCESSION   DASRPQ010001889 DASRPQ010000000
VERSION     DASRPQ010001889.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1492793"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1042..>1300
                     /locus_tag="VFD73_21445"
     CDS             1042..>1300
                     /locus_tag="VFD73_21445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76536.1"
                     /translation="MNEFTIVTTIGRPVGEVFAVIRDVARTPVWTPGMTEARQTSEGP
                     LEPGATLVYRGTFLGRSYETPAVCTALAENRQFATQSAAGPL"
BASE COUNT          228 a          428 c          409 g          235 t
ORIGIN      
        1 tggccgtcgc agcgatcggc aacatcctgt acgccatcga cggcgcatcc cagcccggac
       61 acaacgcctc cacccgcacc gtgcaaaccc tcacctttca caactaggga gatatcccgt
      121 ctgtagcagc tgagcaattc cagatcttca ggagccgtgt cgcagtggtg agcacttcct
      181 cgcaaacgac accgccggcg caggcaagag ccgggtttag atgagggcat tgggcaagcg
      241 ggacgtaagc tctgacccaa ggagtgataa cggaccgtta ttacttcctc cggagcccta
      301 tggggcgccc gcgtgcatgg caggtccgcc gcagacgcgg aatcctagac gggttgcatc
      361 tggggcggtg gcggcctggt ttcggctagg ttgggcggtg ccggaaggtt gaccttggaa
      421 aggcattgac ctggggaggc gggggtgcga actgggctgt tcaagcatca tgccgggtcc
      481 tgagagggtc caaccctggt tcgtccatgt gtcgctgggt tatcagcact acgacgtacg
      541 tctcccccgt ctccggcgtt ccggtgcgtc tcgctgacca gggagatcgg ggccgatgac
      601 tgtcgcctac ctcccagagg gtctctcccg tcccgcagcg tctccttagc aatttcgtta
      661 gctgagcagg tccgctacct gcggctaccc cgccttcaag cgcgcgaacg ggacactgcc
      721 tgacgatcgc tcacatctgg tcagctgact gcatgctcag gttgaccggt agcgcgttta
      781 cgagcgaacg agcgcatccc ggaagtgacg ccgcaggtgc ccttgacagg ttccggctgt
      841 cgtgaacact cctacggccg gttcgggtga ggccacccca cttcctcccg catgctcccg
      901 accttcagat ccgcaggagt gggcacgtcg cccaggaccg tccgatgcgt cctgttcgct
      961 ggcccgcgat gcccgccgta acgatgcggt aacggttggt ccctagcgtg gcctcctaga
     1021 gcatacgaaa aggaggctac catgaacgag ttcacaatcg tcaccaccat cgggcgtccg
     1081 gtcggcgagg tgttcgccgt catccgggat gtggcccgga ctccggtctg gacgcccggt
     1141 atgaccgaag cccgccagac cagcgaaggc ccgctggagc caggcgccac gctcgtctac
     1201 cgcgggacgt tcctcgggcg gagctacgaa acgcccgcgg tttgcacggc cctggccgag
     1261 aacaggcagt tcgccaccca gagcgccgcc gggccgctct
//
LOCUS       DASRPQ010001890         1091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1492865, whole genome shotgun sequence.
ACCESSION   DASRPQ010001890 DASRPQ010000000
VERSION     DASRPQ010001890.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1492865"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..848)
                     /locus_tag="VFD73_21450"
     CDS             complement(<1..848)
                     /locus_tag="VFD73_21450"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HZI76537.1"
                     /translation="MQRRRRQHSHWGSLTARLALSSTLLGAVCSSAVAQQPDTIVVDS
                     NRVRKLPEITVTRAPEPLKRVPYAVGVLDRDDLQRGQQTVGVDEALNNLPGVVVSNRY
                     NFSLDQRITIRGFGARSNFGVRGLKILLDGVPQTLPDGQSQLTNIDFADIDRAEVLRG
                     ASSSLYGNASGGVISLRTERAAPGPFAQRIRVNGGDGKRAGDGFYKWQSWTSARSGNV
                     SGTLSVSQFKADGFREHSAAEFRQLNGGVDYALGGSSIATLRLSLADDPKAQNPGALT
                     PTEYAV"
BASE COUNT          197 a          364 c          321 g          209 t
ORIGIN      
        1 ttgacggcgt attcagtcgg cgtgagcgca ccgggattct gcgccttggg atcatccgcc
       61 aggctcagcc gcaacgtcgc gatgctggag ccacccaggg catagtccac gccgccattc
      121 agctggcgga actcggcggc gctgtgctct cgaaagccgt ccgccttgaa ctgagagaca
      181 gagagagtgc cactgacatt gccggagcgg gctgaggtcc agctctgcca tttgtagaat
      241 ccatcacccg cccgtttgcc atcgccgccg ttcacccgta ttcgctgggc aaagggaccg
      301 ggtgccgctc gctcggtccg gagcgagatc acccctccag atgcgtttcc gtaaagagag
      361 gaactggcgc cccggagaac ctcggcccgg tcgatatccg cgaaatcgat attcgtgagc
      421 tggctctgcc catcgggcag ggtttgcggc actccgtcga gcaggatctt gagcccgcga
      481 acaccgaagt tggaccgggc gccgaacccg cgaatcgtga tccgctgatc gagtgaaaag
      541 ttgtaacgat tggaaacgac cacgccgggc aggttgttca gcgcctcgtc cacgccgacc
      601 gtctgctgac cccgttgcag atcgtcgcga tccaggacgc cgactgcgta tgggacgcgc
      661 ttcaacggct ccggcgcgcg agtgacggtg atctccggga gcttccgcac ccggttggaa
      721 tcgaccacga tcgtgtccgg ctgttgcgcc accgcggatg agcaaaccgc cccgagcagc
      781 gtactgctca gggcgaggcg tgcagtcaga gatccccagt ggctgtgttg tcgtctgcgg
      841 cgctgcatag cggctcctct ctcagcgaaa gctaatgcag tccgaagcgt gcagcatgct
      901 tgaatacgcc atctcctcac tctacgttcc aagccatgga cgcccgtccc acttcagcca
      961 gcatgccgga tttcaaccag cccccctttg cgggagcacc tgacgcccgc tttgctcccc
     1021 tgccggccga cggtgtcctg cccgaaggct ttttttctac ctccaatctt cccacctata
     1081 tccgaatgga c
//
LOCUS       DASRPQ010001891         1440 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_227505, whole genome shotgun sequence.
ACCESSION   DASRPQ010001891 DASRPQ010000000
VERSION     DASRPQ010001891.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1440
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227505"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..760)
                     /locus_tag="VFD73_21455"
     CDS             complement(<1..760)
                     /locus_tag="VFD73_21455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76538.1"
                     /translation="MSPERGGPASEDGQRYESFIVRVLLNDDGSIRDTRMEHVGTGEV
                     RRWAGWEHNAMLGFVEKAAAPAGFAEEAAAPAALPLLFAAPVGPIDAEPHPESVLEPV
                     AESSATSQVRPLSQQSVNAKAAAKPLPPAQPQASQAVAGSAAADGSPPGLFAPIVRLR
                     PDRTLVRTTQPFAVTLNLDLTKVAPQTERLIYHAVIVARQLGGRSGRTLASPCGLAKV
                     AGTIDITIDAGRLPPGIYLLEAAVSLRAEGASQAG"
     gene            complement(885..1274)
                     /locus_tag="VFD73_21460"
     CDS             complement(885..1274)
                     /locus_tag="VFD73_21460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76539.1"
                     /translation="MTDPNGAPGSVLDLDLGFTVTGHIDFPNPLSGTANVAVYADQLG
                     GGYSQKILSKDITITANPSDPSATQRIDWTLIYPTDLPATSQPLSDPSPPPPSGSMVY
                     NLVAVFTFNGVLSDIAAFVEMGTFMIN"
BASE COUNT          228 a          422 c          509 g          281 t
ORIGIN      
        1 tgcccgcctg gctggcgcct tctgcccgca ggcttacggc tgcttccagg aggtaaatgc
       61 caggtggcag acgtccggcg tcaatcgtga tgtctatggt gccggctact ttcgccagcc
      121 cgcaggggct ggcaagggtt ctgcctgatc ttcccccgag ttgcctggct acgatcaccg
      181 cgtggtagat gagccgctcg gtttgtggtg ccactttggt caggtccagg ttcagggtca
      241 ccgcgaaagg ctgcgtcgtg cggactagcg tgcgatccgg ccgcaacctg acgatcggtg
      301 cgaagagccc gggcggggag ccgtccgcgg ccgcggagcc ggccactgcc tgggacgctt
      361 ggggctgggc cggcggcaag ggtttcgcgg ctgcctttgc gttgacggat tgctggctga
      421 gggggcggac ctggctggtc gcgcttgatt cggcgactgg ctcgagcacg gattctgggt
      481 gcggctccgc gtcgattggc cctaccggcg cggcgaaaag cagaggaagg gcagcggggg
      541 cagcagcctc ctcggcaaag ccagcggggg cagcagcttt ctcgacgaag cccagcatgg
      601 cgttgtgctc ccagccggcc cagcgcctga cctcgccggt cccgacgtgc tccatcctgg
      661 tgtcgcggat cgagccatcg tcgttgagca ggacgcggac gatgaagctt tcgtagcgct
      721 gcccgtcttc tgacgcagga ccgccgcgtt ccggtgacat cgcggttcct ctcgcacgtt
      781 tcggtacggc cggtccgggg cccgggtcgg ctgcggccgt gcccgggccc cgcacctgcg
      841 tcagattctt ctgcttgaac tcgcgatgcg gaagaccggc gagctcagtt gatcatgaag
      901 gtccccattt ccacgaacgc tgcgatgtcc gagaggacac cgttgaaggt aaagacagcg
      961 acgaggttgt acaccatcga acccgacgga ggcggaggcg aaggatcgga aagcggctgc
     1021 gaggtggctg gcaggtcggt ggggtagatc agcgtccagt cgattctctg ggtagccgat
     1081 ggatccgacg ggttcgctgt gatggtgatg tctttcgaca gaatcttctg gctatacccg
     1141 ccgccgagct ggtctgcata gacagcgacg tttgccgtgc ccgagagcgg gttcgggaaa
     1201 tcgatgtgac ccgtgaccgt gaagcccagg tcgaggtcga ggacactccc cggggcgccg
     1261 tttgggtcgg tcacctgatc gacagcgaaa tcggattgta cgatggacgg gaactggatt
     1321 tggctagacc ctggtacaga catagtggca gccttcctgc ttgtgaatgg gtctggactg
     1381 gatccgctct tgcgagtgtc gaagtgtgtt accttcaccg gccccgtgac cgatgcggga
//
LOCUS       DASRPQ010001892         1017 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3691500, whole genome shotgun sequence.
ACCESSION   DASRPQ010001892 DASRPQ010000000
VERSION     DASRPQ010001892.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3691500"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..352)
                     /locus_tag="VFD73_21465"
     CDS             complement(<1..352)
                     /locus_tag="VFD73_21465"
                     /inference="COORDINATES: protein motif:HMM:NF040248.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI76540.1"
                     /translation="MVAFFVRRVLQSIVVLLIVTLITFGLLRMIPGNVAVAVMGPGAY
                     RNPEAIKLFNATYGFNLPWYQQYFLWLSHLARGNLGYSWTLNQSVASLLAIRLPKTIV
                     LVGISTILALVLAIP"
     gene            complement(446..>1017)
                     /locus_tag="VFD73_21470"
     CDS             complement(446..>1017)
                     /locus_tag="VFD73_21470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76541.1"
                     /translation="VTPNGTSTCTNPTLCGKGVKSGQGLSFNMPYATGTQWIQQEMQQ
                     LQSNASLVGIKINLQPKPFNQVTALAAGNCKVAKIPCNWDIANWGGGWSFAPDYSPTG
                     ETLFLCGAIANSGGYCSKTNDNYINATLTSNDPQAMYTWQNYLAQQLPVMFQPNGVYS
                     LTEVVNNLKGVLPQSPTLSINPENWYFVK"
BASE COUNT          173 a          292 c          360 g          192 t
ORIGIN      
        1 tcgggatcgc gaggaccagc gccaggatcg tggagatccc gaccagcacg atggtcttgg
       61 gcagccggat ggccagcagc gatgcgacgc tctggttgag cgtccaggag tacccgaggt
      121 tgccccgggc gagatggctc agccacagga agtactgctg gtaccacggg aggttgaacc
      181 cgtaggtggc gttgaagagc ttgatggctt ccgggttgcg ataggcgccg gggcccataa
      241 ccgcgacggc aacgttgccg gggatcatcc gcagcagccc gaacgtgatc agcgtgacga
      301 tgagcagcac cacgatcgac tggagcaccc ggcggacgaa gaaggctacc aacgctggcc
      361 cctttccggt ccctgcctgt ggcgccggga tgaccggcgc cacaggcagg acctagcacg
      421 tgaccgcgag gtcatgcgcc agacattact taacgaaata ccagttttcc gggttgatgg
      481 acagcgtcgg gctttgcggc aggacgccct tcaggttgtt gacgacctcg gtcagcgagt
      541 acacgccgtt cggctggaac atgaccggga gctgctgcgc caggtagttc tgccaggtgt
      601 acatggcctg cgggtcgttg ctggtgagag tggcgttgat gtagttgtcg ttggtcttgc
      661 tgcagtaccc gccggagttg gcgatcgcgc cgcacaggaa cagcgtctcc ccggtggggg
      721 aatagtcggg agcgaacgac cagccgccgc cccagttggc gatgtcccag ttgcacggga
      781 tcttggcgac cttgcagttg ccggcggcca gcgcggtgac ctggttgaac ggcttgggct
      841 gcaggttgat cttgatcccg accagggagg cgttggactg cagttgctgc atctcctgct
      901 ggatccactg ggtgcccgtg gcgtacggca tgttgaagct cagcccctgg cccgacttga
      961 cgcccttgcc gcacagggtc gggttcgtgc aggtgctggt gccgttgggg gtgacct
//
LOCUS       DASRPQ010001893         2305 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3035803, whole genome shotgun sequence.
ACCESSION   DASRPQ010001893 DASRPQ010000000
VERSION     DASRPQ010001893.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2305
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3035803"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            252..1313
                     /locus_tag="VFD73_21475"
     CDS             252..1313
                     /locus_tag="VFD73_21475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HZI76542.1"
                     /translation="MFITKPYVTDRKIRFALVGCGRISANHFAAIEKHASRAELVGVC
                     DIDPVALQKAEERTGAPGFRSLDALLAGSDADVVILATPSGLHADEAVQVAEAGRHVM
                     TEKPMATRWQDGKRMVHACDVAGVHLFVVKQNRRNATLQLLKRAVERGRFGRIYMVTI
                     NVFWTRPQSYYDSAPWRGTWEFDGGAFMNQASHYVDLLDWLIGPVESVQAYTATLERN
                     IQVEDTGVVSIRWRTGALGSMNVTMLTYPKNLEGSITIIGEKGTVRVGGVAVNRIDHW
                     EFAEPDPDDQRIEQVSYETSSVYGFGHPLYYDNVIKSLRGEAVPDTDGREGLHSLEIL
                     IATYLSARDGRRVALPLEY"
     gene            1315..2223
                     /gene="rfbA"
                     /locus_tag="VFD73_21480"
     CDS             1315..2223
                     /gene="rfbA"
                     /locus_tag="VFD73_21480"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000166786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HZI76543.1"
                     /translation="MGYVRDRTSVRKGIILAGGAGTRLHPVTRAVSKQLLPIYDKPMI
                     YYPLSTLMLGEIREILIISTPQDLPAFRQLLGDGGQWGLDLRYAEQPSPDGLAQAFII
                     GRDFIGRDSSSLVLGDNIFYGHELSHTLQRASRQRQGATIFGYHVNNPSAYGVVEFDG
                     NGKPIRIEEKPRRPRSNYAVTGLYFYDNRVIDIAREIRPSARGELEITDVNSAYLQLG
                     ELKLERLGRGTAWLDTGTHESLLQASLFIETIEQRQGLKIACPEEIAYRMGYIGAEQL
                     ERLAEPLKQTAYGQYLRQLIQEPEAE"
BASE COUNT          459 a          697 c          716 g          433 t
ORIGIN      
        1 tgctcggctt cgggcggggc aaaaagcttt tgtaacgcct cagccgggta caccgcgtgg
       61 gcggatacgg gtcgggtcgc ggttgccatc gggggactct ccttgggcgg ggcagggact
      121 ttgtgaaaca attcacaaga taacgctcgc tcctcaatct cgccagagca gcgggggctt
      181 gccaagatac gcaatccctt gcaggctcgg ctgctgctat cttccccgcc agcgtggaaa
      241 cccctggacc gatgttcatc accaagccct atgtcacgga ccggaagatc cggttcgcgc
      301 tggtggggtg cggccggatc tcggccaatc acttcgcggc catcgaaaaa cacgccagcc
      361 gagccgagct ggtcggggtc tgcgacatcg atcccgtggc gctgcagaag gcggaggagc
      421 gaaccggcgc tcccggcttc cgctcgctgg atgcactcct cgctggatcc gacgccgacg
      481 tcgtgattct ggcgacgccg agtggcctgc acgccgatga ggccgtacag gtggccgagg
      541 ccggtcgcca tgtcatgacc gaaaagccga tggccactcg ctggcaggac ggcaagcgaa
      601 tggtccacgc ctgcgacgtg gccggggtcc acctcttcgt cgtgaagcaa aaccgccgga
      661 atgccaccct gcagttactc aagcgtgcgg tcgaacgggg tcgcttcgga cgcatctaca
      721 tggtgaccat caacgtgttc tggacccgtc cccagtcgta ctacgacagc gcaccctggc
      781 gcggcacctg ggagttcgat ggcggtgcgt tcatgaacca ggcgagccac tacgtcgacc
      841 tgctggattg gctcatcggg ccggtcgaaa gcgtgcaggc atacaccgcg acactcgagc
      901 gcaacattca ggtggaagac accggtgtgg tcagcatccg ctggcggacc ggggcactcg
      961 ggtcgatgaa tgtgacaatg ctgacctatc ccaagaacct ggaaggctcg atcacgatca
     1021 tcggagagaa gggaacggtt cgggtcggcg gagtcgccgt gaaccgcatc gatcactggg
     1081 agttcgccga accagacccg gatgaccagc gcatcgagca ggtcagctac gagacctctt
     1141 cagtgtatgg gtttggtcac ccgctgtact acgacaacgt gatcaagtcg ctgcgcggtg
     1201 aagcggttcc tgataccgat gggcgggaag gactgcattc gctggagatc ctgatcgcca
     1261 cctatctgtc cgccagggat ggaaggcgag tagcgctgcc cctggagtac tgacgtgggc
     1321 tacgtccggg atcggacctc agtgcggaag ggaatcattc tggcgggtgg tgccggtact
     1381 cggcttcatc cggtcactcg cgccgtcagc aagcagcttc ttccaattta cgacaagcca
     1441 atgatctact acccgctctc gacgctcatg ctgggcgaga ttcgggagat tctgatcatc
     1501 tccacacctc aggatctgcc cgcctttcga caacttttgg gagatggcgg ccaatggggt
     1561 ctggacttgc gctacgcgga acaaccgtcc ccggacggtc tggcccaggc gttcatcatc
     1621 ggccgcgatt ttatcgggag agactcctcg tctctggtgc tcggagacaa cattttctat
     1681 ggccacgagc tcagccatac gctgcaacgg gcgtctcgcc agcgccaggg cgccacgatc
     1741 tttgggtatc acgtgaacaa tcccagtgct tacggtgtcg tggagttcga tggcaatgga
     1801 aagccgattc ggatcgagga gaaaccccgc cgtccgcgct cgaactacgc cgtcaccggt
     1861 ctttacttct acgacaaccg agtgatcgac atagcgcgcg agatcaggcc gtccgcccgc
     1921 ggagagctcg agatcactga tgtcaattcc gcgtacctgc agctcggcga gctgaagctg
     1981 gagcgtctcg gacgaggaac cgcctggctg gataccggca cccacgaatc gttattgcag
     2041 gcgtctctct tcatcgagac gatcgagcaa cgccagggac tcaagatcgc ctgtcctgaa
     2101 gagatcgcat accggatggg ctacataggt gccgaacagc tggaacgcct tgccgaaccg
     2161 ctgaagcaga cggcgtacgg ccagtatctc cgtcaactta ttcaggaacc agaggccgaa
     2221 tgaaggtctc ctcgagccca atcgagggcc tactcctcct cgagcccgtg gtgcatcggg
     2281 atgcgagggg attctttctg gagag
//
LOCUS       DASRPQ010001894         2503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4287116, whole genome shotgun sequence.
ACCESSION   DASRPQ010001894 DASRPQ010000000
VERSION     DASRPQ010001894.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2503
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4287116"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1211)
                     /locus_tag="VFD73_21485"
     CDS             complement(<1..1211)
                     /locus_tag="VFD73_21485"
                     /inference="COORDINATES: protein motif:HMM:NF013106.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HZI76544.1"
                     /translation="MQSKKGRISPRLRRNILVGVLATLALVLAFLAAAWSSACAGNTC
                     PSIDELGSYDPNQASKLYAADGRLITDLGLERRTVIPLGEMSPYVKAAFLATEDKRFY
                     SHHGIDWYRVFGAIRTNLFQLRFAEGFSTITMQLARNIWDEDISGRDKSLRRKLREAH
                     VAMEIERKYPKDKILEIYLNQIPLGNGAYGVEAASQRYFGKSVRDLNVAEAATLAAIP
                     KAPSRYNPRRNPNFNIQRRNTVVNLLRDNGLLNTEDAERWKAYPLLLSSHSDYSGVAE
                     YFVEYVRQQLEARFGRELYTSGYRIYTTLDLDIQQAAERALEARLEAIESGADGKFPH
                     DTYRQYLESKTDNAEDNSRTTTPYLQGLVVTLEAKTGYIRAMVGGRDFEDSKFNRATQ
                     ALRQPGSTFKP"
     gene            1345..>2503
                     /gene="tyrS"
                     /locus_tag="VFD73_21490"
     CDS             1345..>2503
                     /gene="tyrS"
                     /locus_tag="VFD73_21490"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HZI76545.1"
                     /translation="MDELIKTLTARGLYQDATSGLEQRLRQGPITGYVGFDPTADSLH
                     VGNLVPVMGAAWLQRFGHTPIILIGAGTGMVGDPSGKRDERPILSVSEIDRNASSIQQ
                     QLTRFVDFSSANAARVRNNADWLRTLPLMEFLRDTGKHLTLGFMLQKESVRSRLEGGI
                     SYTEFSYMVIQAYDFWHLFRTEGAELQVGGSDQWGNITAGIELIGKRERRQAYGLVFP
                     LVTNASGTKFGKSEAGNVWLDPRRTSPYEFYQFWINVDDRDVERYLKLFTFLSLEEIG
                     VALEQQAEDPGKRVAQRLLARDVTLRVHGPKATEEAIRTSETLFGGKTGSGMPAEMPT
                     REISRAALGGRLAVVDLLVSSGLASSKADARRGIQGRGFYLNDAPIDAPDLQ"
BASE COUNT          470 a          753 c          784 g          496 t
ORIGIN      
        1 atgggcttga aggtcgagcc gggctgacgc agcgcctggg ttgcccggtt gaatttgctg
       61 tcctcgaaat cgcgccctcc caccatcgca cggatgtacc cggtcttcgc ctcgagagtg
      121 acgaccagtc cctgcaggta gggagtggtg gtgcggctat tgtcctcggc gttgtcggtc
      181 ttcgattcga ggtactgtcg ataggtatcg tgaggaaact tcccatccgc gccgctttcg
      241 attgcttcca gccgggcctc gagtgcccgc tcggcggcct gctgaatgtc cagatccagc
      301 gtggtataga tccggtagcc ggaggtatag agttctcgcc cgaaccgggc ctccagctgc
      361 tgccgcacgt actcgacgaa gtactcggcc acaccgctgt agtccgagtg cgaggagagc
      421 agcagcggat acgctttcca gcgctcggcg tcctcggtat tcaggagccc gttgtcacgg
      481 aggaggttta ccaccgtgtt ccgtcgctgg atgttgaagt tcggattccg gcggggatta
      541 taccgggatg gcgccttggg gatagcagct agtgtcgccg cttcggccac gttcagatca
      601 cgaaccgatt tgccgaagta gcgctgggat gccgcctcga cgccataggc gccgttccct
      661 agcgggatct ggttcaggta gatctcgaga atcttgtcct tgggatattt ccgctcgatc
      721 tccatggcca cgtgagcctc acgcagcttc cggcgcagcg acttatcccg gccgctgatg
      781 tcctcgtccc agatgtttcg ggccagctgc atcgtgatgg tcgagaaccc ttcggcaaac
      841 cgcagctgga aaaggttcgt ccggatagcc ccgaagaccc gataccaatc gatgccgtga
      901 tggctgtaga accgcttgtc ctcggtggcg agaaacgcgg ccttcacata gggcgacatc
      961 tcgcccagcg ggatcaccgt ccgccgctcc agaccgagat cggtgatcag ccggccgtcg
     1021 gcggcgtaga gcttggaagc ctggttgggg tcgtagctgc ccagctcatc gatggaggga
     1081 caggtgttcc cggcgcacgc gctgctccac gccgcggcca gaaaggcaag taccagcgcc
     1141 agcgtcgcca gcaccccaac caggatgttg cggcgaaggc ggggtgagat ccggcctttc
     1201 ttcgactgca tggcgcggga acgcgttatt ccagaatcat tgcgattcag aggatccaat
     1261 ggatccactg gatcctgtgg gtgggtcata tgcgcaaact agccgattgc catgctcgaa
     1321 accagcgggt agcattgggc gcctatggac gaactgatta aaactttgac ggcgcgcggt
     1381 ctttaccagg acgcgacctc gggtctggag caacgtctgc gccagggccc gattaccggc
     1441 tacgtgggct tcgacccgac cgctgattcg cttcacgtcg gcaatctggt cccggtgatg
     1501 ggcgctgcct ggctgcagcg cttcggtcac acacccatca ttctgatcgg agcagggacc
     1561 gggatggtgg gcgacccgag cggaaagcga gacgagcgcc ccatcctctc agtgagcgag
     1621 atcgaccgca acgcctcctc cattcagcag caactcaccc gattcgtgga tttcagctcc
     1681 gccaacgccg cacgggtgcg gaacaatgca gactggctac gtaccctgcc tttgatggag
     1741 ttcctcagag acaccggcaa gcatctcacg ctcggcttca tgctgcagaa ggagagcgtc
     1801 cgtagccggc tcgaaggcgg gatcagttac accgagttca gctatatggt catccaggcc
     1861 tacgatttct ggcacctgtt ccgcacggaa ggcgccgagc tgcaggtggg tgggagtgac
     1921 cagtggggaa atatcaccgc ggggatcgag ctgattggaa agcgcgagag gcgtcaggcc
     1981 tacgggctgg tgttccccct cgtcaccaat gcatccggga ccaagttcgg aaagagcgag
     2041 gctggcaatg tgtggctcga tccccggcgc accagtccct acgagtttta tcaattctgg
     2101 atcaatgtcg atgatcgcga tgtcgaacgg tacctgaaat tgttcacctt cctctccctg
     2161 gaagagatcg gcgtcgcctt ggagcagcag gccgaggatc cgggaaagcg ggtggcgcag
     2221 cggctccttg ctcgcgacgt aacgcttcgc gtacatggcc ccaaggccac ggaagaagca
     2281 atccgcacga gtgagaccct gttcggtgga aaaactggat cagggatgcc tgcagagatg
     2341 ccaacccgtg agatctcccg cgccgctctg ggtggccgcc ttgccgtagt ggacctgctg
     2401 gtctcgagtg gcctcgccag ctccaaggct gatgcccgca gagggattca ggggcgaggc
     2461 ttttacctca atgacgctcc gatcgacgcc cccgaccttc agc
//
LOCUS       DASRPQ010001895         4485 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3692110, whole genome shotgun sequence.
ACCESSION   DASRPQ010001895 DASRPQ010000000
VERSION     DASRPQ010001895.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4485
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3692110"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            117..332
                     /locus_tag="VFD73_21495"
     CDS             117..332
                     /locus_tag="VFD73_21495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76546.1"
                     /translation="MTYENIIALLGYAGGHEQLVRITTTTQTEVVGIPTSVDTHVTAH
                     EVYLRPEGDEATEIAVSLAAIRDVELV"
     gene            449..700
                     /locus_tag="VFD73_21500"
     CDS             449..700
                     /locus_tag="VFD73_21500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76547.1"
                     /translation="MESILAITFIFGGGTLFLLSVSPVGRALADRLRGHAPPLADPDL
                     VAEVDALRQEVAELHERVDFTERMLSSHDRSALGKGETA"
     gene            697..1056
                     /locus_tag="VFD73_21505"
     CDS             697..1056
                     /locus_tag="VFD73_21505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76548.1"
                     /translation="MMVQQIPVPPTPPTPHFDPNLLFMQHNGPPVALLIVVAALTATV
                     VILWPVMRALARRLEGKGGGDPALRADLEQMHMRLGEVDHSQQRVAELEERVDFTERL
                     LAQSHDSQAKVLRGGTS"
     gene            1070..1465
                     /locus_tag="VFD73_21510"
     CDS             1070..1465
                     /locus_tag="VFD73_21510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76549.1"
                     /translation="MITREDIQSFLDRLEGGSLAVREVEPNLWLTRTADDAEVVIHYA
                     PPVVILRVRVMELPASEPRRGELFRQLLEYNARELVHGSYGLEGDHVVLTDTLELENL
                     DYSEFEASFDSITLALASHLGALATYRER"
     gene            1472..2245
                     /locus_tag="VFD73_21515"
     CDS             1472..2245
                     /locus_tag="VFD73_21515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspA/IM30 family protein"
                     /protein_id="HZI76550.1"
                     /translation="MGIFDRLSTMLRSNINDLISRAENPEKMLNQLIVDMKTQLAKAK
                     QQVASAIADERKLQNDAEAMKKQADDWERRAMLAVQEGRDDLAKQALARYNEQLQGAQ
                     QLQETWLRHRAETEQLKLSLRQLNDKIEEAKRKKNILVARSKRAEAQQRIQETMSGLA
                     NKSAFESFERMAEKIEATERKALAAAELNEEFSGDNLARQFEALEYKGSSDQQLLELK
                     TKMGLIAPGRDQGSKQLGRGQGDVRDAELIEEGDEGKAH"
     gene            2245..3372
                     /locus_tag="VFD73_21520"
     CDS             2245..3372
                     /locus_tag="VFD73_21520"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HZI76551.1"
                     /translation="MVPTEAERRRGFPLGWVLLAVVVVALLLRTIDVLLVIFLAIILA
                     VYLNAVSGFLQRRFGVPDSLGLVAAVLLTLGGLTGVIFLIIPAVASQVQDLIANLPRF
                     LSDLDVSINRLLSRVPVLRRGVTDGTTPGVLATSLNEVFGFLRGALVPYLKGGVELII
                     ETVSVFVMALYMARNPGIYVEGVIGLIPPSRRPLGRVILYDLKLTLHAWVVGQIISMV
                     LLAVLTTLGLWALGVPYFLAFGVFAGIAAIVPFFGTLFSTVVPALLVLGVNGLPKAVA
                     VILLGIGVHLIEANFVAPIVMERQVNLPPVITIAGVLLIGKLFGLAGLIIAVPILAFV
                     MVLIRHILLGEVYGDAVSEVKPTGVVPAEAQPAITSQPVTP"
     gene            3369..4460
                     /locus_tag="VFD73_21525"
     CDS             3369..4460
                     /locus_tag="VFD73_21525"
                     /inference="COORDINATES: protein motif:HMM:NF019375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1611 domain-containing protein"
                     /protein_id="HZI76552.1"
                     /translation="MSSKPPRFLIIADGDFSPMTSKTANSVIRYLPERTVAVLDRSQA
                     GMTVQQVLGFGGSIPVVGSIKEGLAFRPDAVLVGIAPQGGRLPEEWRAWLAEALDAGC
                     DLWSGLHTFLGDDPVLAAKAKAGGRRIFDLRKPPRDLPVASGAAKEVEPYVVLTVGTD
                     CNVGKMTAQLQLTKHLNAAGLRTRFVATGQTGIMIEGWGIAVDAVIADFIAGAAERLV
                     LEGSRDADVVLVEGQGSINHPGYSAVTLGLLHGSCPDGLILCHQSTRQYIGDYREAAW
                     LRIPPLREYIRLYETIGSAVHPTRVIGICLNTYDMTDDAARKACGAASRETELPVTDP
                     VRFDPAPLVEAVRQGRKAYLASRKNLVSA"
BASE COUNT          825 a         1382 c         1456 g          822 t
ORIGIN      
        1 tcagccttaa cgcaagaggt ttagggcgaa gcgaccgcag ggttgacagc ggaatcctca
       61 tggcgagcca cgtcgacgaa gcctagatta tggaatccag tctccgagga gtccagatga
      121 cgtacgagaa tattattgct ctgctgggct atgccggcgg tcacgagcag ctcgtccgca
      181 tcacgaccac cacccagacc gaggtcgtcg gcattcccac aagcgtagat acccatgtca
      241 ccgcgcacga ggtctacctg cggccagagg gcgatgaagc caccgagatt gcggtatcgc
      301 ttgccgcgat cagagacgtc gagctggtct gacccgtggc cctgctgaaa ggtggttgtt
      361 ccgttgtgaa acagctagtg ggctccggac gtatagcctg agtctcaggc cgagcggggc
      421 tcggcacgca acggggaagg ccatggacat ggaatcgatt ctcgccatta cgtttatctt
      481 cggcggcggc acccttttcc tgctttctgt cagcccggtt gggcgggctc tggccgaccg
      541 tcttcgcggt catgcgccac cgctggccga tccagacttg gtggctgaag tcgatgcgct
      601 gcggcaggaa gtagcggagt tgcacgagcg ggtggatttc accgagcgga tgctgagtag
      661 tcacgaccgc agcgcgttag ggaagggaga gaccgcgtga tggtgcagca aatcccggta
      721 ccgcccacac cgccgacccc gcacttcgac cccaacctgc tgttcatgca gcacaacggg
      781 cctccggtcg cgctgttgat cgtcgttgcc gcactcacgg caacggtcgt catcctctgg
      841 ccggtcatgc gggcgctggc gcgtcgcctg gagggtaagg gcggcggcga cccggcgctc
      901 cgggcggatc tcgagcagat gcacatgcgt ttgggcgaag tggaccactc gcagcaacgg
      961 gtcgccgagc tcgaggagcg ggtagacttc accgagcggc tcctggcgca gtcgcacgat
     1021 tctcaggcca aggtgctccg gggaggcacg tcatgaggcg attaggttta tgatcacccg
     1081 cgaagacatc cagtcgttcc tcgaccggct cgaagggggc agcctcgctg tgcgggaggt
     1141 cgagcccaac ctgtggctca cccgcaccgc cgatgatgcc gaggtggtga tccactacgc
     1201 accgccggtc gtgattctcc gggtgcgggt gatggagctg ccggccagtg agccgcgccg
     1261 gggcgagttg tttcgccagc ttctggaata caatgcccgc gagctggtgc acggatccta
     1321 cggcctcgaa ggcgaccacg tggtgctgac cgatacgctg gagctggaga acctggacta
     1381 cagcgagttc gaggcaagct tcgactccat tacgctggcg ttggcctcgc acctcggcgc
     1441 gctcgcgacg taccgcgaaa ggtgaagtgt catgggaatc tttgaccgtc tctccaccat
     1501 gctgcggtcg aacatcaacg atctcatctc tcgggcggaa aacccggaga agatgctgaa
     1561 ccagctgatc gttgatatga agacccagct ggccaaggcc aagcagcagg tggcctccgc
     1621 catcgcggac gaacgcaagc tccagaacga tgcggaggca atgaagaagc aggccgacga
     1681 ctgggagcgc cgcgcgatgc tcgcggtgca ggagggccgg gacgatctgg ccaagcaggc
     1741 cctcgcccgg tacaacgagc agcttcaggg ggctcagcag ctgcaggaga cctggctccg
     1801 acatagggcc gaaaccgagc agctcaagct gtcgctccgt cagctgaacg acaagatcga
     1861 agaggccaag cgaaagaaga acatcctcgt ggcccgctcc aagcgggcgg aggcgcagca
     1921 gcggatccag gagaccatgt cgggcttggc caacaagagc gccttcgaat cgttcgagcg
     1981 catggctgag aagatcgagg ccaccgaacg caaggctctg gctgcggcgg agctgaatga
     2041 ggagttctcc ggcgacaacc tcgcccgcca attcgaagca ctggaataca agggcagctc
     2101 ggaccagcag ctgctcgagc tcaagaccaa aatgggcctc atcgcacccg gccgggatca
     2161 agggtccaag cagctcggcc gaggccaggg tgacgtgcgc gatgccgagc tgatcgagga
     2221 gggagacgag gggaaggcgc actgatggtg ccgaccgaag ccgaacgacg gcgagggttc
     2281 cctctaggct gggttctcct cgccgtcgtc gttgtcgccc tgctgctccg cacgatcgac
     2341 gtcctgctgg tcatcttcct ggccatcatt ctggctgtct acctgaatgc cgtctccggc
     2401 tttctccagc ggcggttcgg ggtgccggat tcactgggac tcgtcgcggc cgtcctgctt
     2461 acgctgggcg ggctcaccgg cgtcatcttc ctgatcattc cagcggtggc cagccaggtc
     2521 caggacctga tcgccaatct cccccgcttc ctcagcgacc tcgacgtaag catcaaccgg
     2581 ctgttgagcc gggtgccggt gctccggcgt ggggttaccg acggaaccac gcctggggtg
     2641 ctcgcgacct cgctcaacga agtgttcggg ttcctgcgag gtgccctggt gccgtacctg
     2701 aagggcggcg tcgagctgat tatcgaaacg gtaagcgtgt tcgtgatggc gctctatatg
     2761 gcgaggaatc cgggcatcta tgtggagggc gttatcggac tcataccgcc atctcgacgc
     2821 ccgctcggcc gggtcattct ttatgacctg aagctgaccc tgcacgcctg ggtggtggga
     2881 cagatcattt cgatggtgct gctcgcggtg ctcactaccc tgggactctg ggcgctcggc
     2941 gtcccctact ttcttgcatt cggggtgttc gcggggatcg ctgccatcgt tccgtttttc
     3001 gggaccctct tctcgacggt ggtgccggcg ctgctggtgc tcggcgtcaa cggcttgccg
     3061 aaggcggttg ccgtcatcct gctcgggatc ggggtgcacc tgatcgaggc gaacttcgtg
     3121 gcgccgatcg tgatggaacg ccaggtgaat ttgccgccgg tgatcaccat tgctggtgtc
     3181 ctcctcattg gaaagctgtt cgggctggcg ggactgatca tcgcggttcc cattctggct
     3241 ttcgtgatgg ttctcattcg ccacatcctc ctgggtgagg tctacggcga cgcggtgagc
     3301 gaggtgaagc ccaccggcgt cgttccggcg gaagcccagc cagccattac ttcccagccg
     3361 gtgactccgt gagctcgaaa ccgccacgat ttctcatcat cgccgacggc gacttcagtc
     3421 cgatgacgtc caagaccgcc aattcggtca tccggtattt gcccgagcgc actgtcgcag
     3481 tgctcgaccg gagccaggcc ggcatgacgg ttcagcaggt actcggattc ggagggagca
     3541 ttccggtggt cggctcgatc aaagaaggac tggcgttccg gcccgacgca gtgctggtgg
     3601 ggatcgctcc ccaaggaggc agactgccgg aggaatggcg ggcatggctg gccgaagcgc
     3661 tggacgccgg gtgcgatctc tggagcggac tccacacgtt cctcggtgac gatcccgtgc
     3721 tggccgccaa ggccaaggcc ggcgggcgca ggatcttcga tctccgaaag ccaccccgcg
     3781 acctgccagt tgcctccggt gcagcaaagg aggtagagcc ctacgtcgta ctcaccgtcg
     3841 gcaccgattg taacgtcggc aagatgacgg cccagctcca gctcacgaaa cacctgaatg
     3901 ccgctgggct ccgcacccgc ttcgtcgcca ccggccagac cggaatcatg atcgaaggct
     3961 ggggcatagc ggttgacgcg gtgatcgccg acttcattgc cggcgcggca gagcgcctgg
     4021 tgctcgaggg cagcagagat gccgatgtgg tgctggtgga agggcagggc tcgatcaatc
     4081 acccgggcta ttccgcggta acgctcggtc tcctgcacgg ctcctgccct gacggattga
     4141 ttctgtgcca tcaatccacg cgccaataca tcggcgatta tcgtgaggcg gcgtggctca
     4201 gaattccgcc acttcgcgag tatatccggc tctacgaaac aattggctcc gccgtccatc
     4261 cgaccagggt aattggaatc tgcctcaaca cctacgacat gaccgacgac gcggcacgaa
     4321 aggcatgcgg ggctgccagc cgggaaacgg aactgcctgt caccgatccg gtgcgtttcg
     4381 accccgcccc gctggtggag gcggtacgcc aggggcgcaa agcctatctc gcgtcccgga
     4441 aaaacctggt atccgcctga gctaccgcag gaaatcaatc cgggc
//
LOCUS       DASRPQ010001896         1487 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_529419, whole genome shotgun sequence.
ACCESSION   DASRPQ010001896 DASRPQ010000000
VERSION     DASRPQ010001896.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1487
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_529419"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            142..1380
                     /locus_tag="VFD73_21530"
     CDS             142..1380
                     /locus_tag="VFD73_21530"
                     /inference="COORDINATES: protein motif:HMM:NF040570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI76553.1"
                     /translation="MSRYRLLPSSAQETVLRDHCAHARFIWNLAVEQHAHWHPGRKSA
                     PGYLEQCRQLTAARAAHEWLRMGSQMVQQQALRDFTWAMAAFFDPQNRTGRPSWRKAG
                     RNEGFRVVGRRGRQWDVRRLSRHVGEVRVPKAGWVRFRWSRDVPQEVKSYRVTCDRAG
                     RWHVAFAAIPDAVPAPGNDQVVGIDRGVHNSAALSTGELMRVPGLTKRERRRMRRLER
                     KLARARPGSSRRMRARRAVARLRACETDRRKDWTEKVSTDIARRFDVIMVEDLQIRNM
                     TRSAKGTQENPGRNVRQKAGLNRGILRSGWGLLVHRLEQKAPGRVEKVNPAFTSQRCS
                     TCGQVDSKSRESQAVFRCTACGYACNADVNAAKNIAAGHAVTARGGLRDAGPVNREPQ
                     LLASLPDVSSWNPPKGRMPK"
BASE COUNT          274 a          457 c          521 g          235 t
ORIGIN      
        1 cgggcgaagt cagcggacaa gacgctcggc gagatctgaa cggccattag gatcgcgggt
       61 tgcaatcccc gaccgtcagg ccggggatga aacgccgcct cacctccccg gaatgacagt
      121 ggtggtcgct actgtattcg catgtcccgg taccgcctgc ttccctcttc cgctcaggag
      181 acagtgctgc gggaccactg cgcccacgct cggttcattt ggaacctagc ggtcgagcag
      241 catgcacact ggcacccggg ccgcaaaagc gctcccggtt atctggagca atgtcggcag
      301 cttaccgctg cacgcgccgc gcatgagtgg ctgcgcatgg gctcccagat ggtacagcag
      361 caggcgctgc gggacttcac ttgggcgatg gccgcgttct ttgatccgca gaaccgaacc
      421 gggcggccgt cgtggcgaaa ggctggccgg aacgagggat ttcgtgttgt gggccgacgc
      481 gggcggcaat gggacgtccg ccgcctgtct cgccacgtcg gcgaggtgcg cgtcccaaag
      541 gctggctggg tacggttccg ctggtccagg gacgtgccgc aggaggtgaa gtcctacagg
      601 gtgacatgcg accgagctgg gcgctggcat gtagccttcg ccgcgattcc cgatgccgtc
      661 ccagcgccag gcaacgatca ggtcgtaggc atcgaccgcg gggtacacaa cagcgcagcc
      721 ctctcgactg gtgaactaat gcgcgttcct ggtctgacga agcgagaacg caggcgtatg
      781 cggcgcctgg agcgcaagct cgcccgtgcc cggcccggat cgagccgccg catgcgggca
      841 aggcgcgccg tcgccaggtt gcgcgcttgc gagacggacc ggcgcaagga ctggacggag
      901 aaggtcagca cggacatcgc ccgcaggttc gacgtgatca tggtcgagga tctgcagatc
      961 agaaacatga ccagatccgc caagggcaca caggagaacc cgggccggaa cgtgcggcag
     1021 aaggccgggc tgaaccgggg catcctgcgc tccgggtggg gcctgctggt ccaccgtctg
     1081 gagcagaaag ctcccggccg agtggaaaag gtcaaccccg cgttcacgag ccaacgatgc
     1141 tcgacatgcg ggcaggtgga ctcgaagtcg cgcgagagcc aagccgtctt ccggtgcacc
     1201 gcctgcggat atgcctgcaa cgctgacgtg aacgcggcca agaacatcgc ggcggggcac
     1261 gccgtgactg cgcggggagg cctccgggac gccgggccgg tgaaccgcga acctcagttg
     1321 cttgcgtcct taccagatgt aagtagctgg aatcccccta aggggaggat gccaaagtag
     1381 tccttgagtg tagagtgcct ggacgcggcg cggatcctcg caggcgtgat agcggtccgg
     1441 tgtggcgtcg ccggaatgtc gtatggcgcg ggtacagttc gatactg
//
LOCUS       DASRPQ010001897         1250 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3036489, whole genome shotgun sequence.
ACCESSION   DASRPQ010001897 DASRPQ010000000
VERSION     DASRPQ010001897.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3036489"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            14..1248
                     /locus_tag="VFD73_21535"
     CDS             join(14..299,299..1248)
                     /locus_tag="VFD73_21535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558251.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZI76554.1"
                     /translation="MAAQKKYPDELRERAVKMLFEVREREGKGHGELARVARQLGVHP
                     EALRSWAKQAEIDGGVRAGITTDDKQRIAELEREVRELRRANEILKAASAYFRAGTRP
                     EASALVEFVDAHRDRFGVEPVCAVLEFPVSSYYHAKKREAEPAAREMRDAGLKEEIME
                     VWAGEKGRKVYGARKIWLELNSQGIAVARCTVERLMRELGIRGASPGRKRPPTTLPGD
                     PADRPSDLLERCFDAAAPNRRWVADITYVQTFSGWVYTAFVMDLFARCVLGWQVADHL
                     RSDLALDALEMAIWARRDEDLGGLVHHSDRGVQYTSIRYAERLAGERAVRSVGSKGDS
                     YDNAAAEALNSLYKRELIDPKMDWQGVDDVMLATMDWVQWYNEDRIHSYSGDMPPKKY
                     EEIYYQALESGKLANSSQT"
BASE COUNT          240 a          327 c          468 g          215 t
ORIGIN      
        1 aggatgcccg gtcatggcgg cacagaagaa gtacccggat gagctgcgcg aacgcgcggt
       61 gaagatgctg ttcgaggtcc gggagcggga gggtaagggg cacggggagc tggccagggt
      121 cgcacgccag ctgggtgtgc atccggaggc cctgcggtcc tgggcaaagc aggcggaaat
      181 cgacggcggg gtgcgggccg gtatcacgac ggatgataag cagcggatcg cggagcttga
      241 gcgggaagta cgcgagctgc gccgggctaa tgagatcctg aaagccgctt cggcgtattt
      301 cgcgcgggaa ctcgacccga ggcttccgcg ctagtcgagt tcgttgatgc gcaccgggac
      361 cggttcggtg ttgagccggt ctgcgcggtc ctggagttcc ccgtgtcgtc gtattaccac
      421 gcgaagaaac gtgaggcgga gccggccgcg cgggaaatgc gtgacgcggg cctgaaggag
      481 gagatcatgg aggtgtgggc tggagagaaa ggacggaagg tttacggtgc gcggaagatc
      541 tggctggagc tgaacagcca gggaatcgcg gtggcgcggt gcacggtcga gcggctgatg
      601 cgcgagctgg ggatccgcgg ggccagcccg gggcggaaga ggccgcccac gacgctgccc
      661 ggcgatcccg cggaccggcc atctgacctg ctggagcggt gcttcgacgc ggcggcgccg
      721 aaccgccgct gggtcgcgga catcacctat gtgcagacgt tttccggctg ggtctatacc
      781 gctttcgtga tggatctgtt cgcccgctgc gttctgggct ggcaggtcgc ggatcacctg
      841 cgttctgatc ttgcgctcga tgcgctggag atggcgatat gggcacggcg ggacgaggat
      901 ctcggtggcc tggtccacca ttccgaccgg ggtgtccagt acacgtctat ccggtatgcc
      961 gagcggcttg ccggggaaag agccgtccgg tcggtcggca gtaaaggcga ttcgtatgac
     1021 aatgctgccg cggaagcgct gaacagcctt tacaagcgtg agctcatcga cccgaagatg
     1081 gactggcagg gagtcgatga tgtgatgctc gcaacaatgg actgggtgca gtggtataac
     1141 gaggaccgga tccactcata tagcggtgat atgccgccga aaaagtacga ggaaatctat
     1201 tatcaggcac tggaatccgg taaactagcg aacagttcgc agacatagcg
//
LOCUS       DASRPQ010001898         1037 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3984125, whole genome shotgun sequence.
ACCESSION   DASRPQ010001898 DASRPQ010000000
VERSION     DASRPQ010001898.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3984125"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..359
                     /locus_tag="VFD73_21540"
     CDS             <1..359
                     /locus_tag="VFD73_21540"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HZI76555.1"
                     /translation="GLAHRKLGDEDTAAFELDAARQALAELGAAAEPERRKTAVSAES
                     RGNSPLTAREIEVLRLVATGRTNRAIADGLGISEKTVARHLSNIFTKLGLTSRAAATG
                     YAYQHDLVPGLSDRPT"
     gene            477..905
                     /locus_tag="VFD73_21545"
     CDS             477..905
                     /locus_tag="VFD73_21545"
                     /inference="COORDINATES: protein motif:HMM:NF025114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZI76556.1"
                     /translation="MQSPEAIDTIVIGGGQAGLSVGYHLSRRGVPFLILEANDRVGDS
                     WRQRWDSLRLFTPARFDGLAGMPFPGDRHRFPTKDEMGDYLEAYARHFRLPVKTGVRV
                     DRLSKSGDGLLADAESLCDGPVGSPGGDQAEHLDLACGKG"
BASE COUNT          178 a          343 c          327 g          189 t
ORIGIN      
        1 tgggactggc ccaccggaaa ctgggtgatg aagacaccgc ggcattcgag ctcgatgccg
       61 cgcgtcaggc tttagcggag ctcggtgctg ccgcggagcc tgagcgaaga aagacagcgg
      121 tctcagccga atcccggggc aactcacccc ttaccgcacg cgagatcgag gtgctccgcc
      181 tggtcgccac cggccgaacc aaccgcgcca tcgccgacgg actcggcatc agcgaaaaga
      241 ccgtcgcccg tcacctcagc aacatcttca ccaagctcgg cctgaccagc cgggcggcgg
      301 ctactggcta tgcctaccag cacgatctcg tccccggact cagcgaccga cctacataga
      361 atgacccatg cggctgagcg gcagctctgg gcaatccgcc cgacgcgggc gctctttccc
      421 ggtgctatga tgtcagcgga acagaggtcc cacacccgca cagaggtaga atgatcatgc
      481 agtctcctga agctatcgac accatcgtca tcggcggcgg acaggccgga ctctcggtgg
      541 gatatcattt gtcgcgccgc ggcgtgccgt ttcttattct cgaagcgaat gatcgggttg
      601 gcgactcgtg gcggcagcgc tgggattccc tgcggctgtt cactccggcg cggttcgatg
      661 gcctcgcggg gatgccgttt ccgggagatc gccatcggtt tcccaccaag gacgagatgg
      721 gcgactacct ggaggcctat gccaggcact tccggctgcc ggtgaaaact ggagtgcggg
      781 tcgaccggct gtcgaagtcg ggtgacggtc ttctcgctga tgccgagtcc ctctgcgatg
      841 gcccggttgg ttctcccggt ggcgaccagg cggagcacct cgatctcgcg tgcggtaagg
      901 ggtgagtccg gccgggaccc ggtcgaagcc ccggtctttt ctcgctcatc gactttccct
      961 gcagcaccca gcttcactaa agcctggcgc gcggcatcga gctcgagtgc ggcggtgtct
     1021 tcatccccca gcttccg
//
LOCUS       DASRPQ010001899         1012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1155305, whole genome shotgun sequence.
ACCESSION   DASRPQ010001899 DASRPQ010000000
VERSION     DASRPQ010001899.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1155305"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..781
                     /locus_tag="VFD73_21550"
     CDS             113..781
                     /locus_tag="VFD73_21550"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZI76557.1"
                     /translation="MTLRSRFFAMTYDRQIARAEKAGLRAYREAVLAGAHGQVLEIGG
                     GTGANLRFYGPAVESLTLTEPETPMLRRLERKARAQTPAAKVLRAPAEDLPFDDDTFD
                     VAVSTLVLCGVDDQPRALRELRRVLRPGGQLLFIEHVRSTNPELARFQDRMNWINRFV
                     VGCDCNRPTLDSLQQAGFTIAQVEHTTLPKAPKFARPAIVGSATAPASVPSRDAQLAT
                     GNRP"
BASE COUNT          189 a          350 c          316 g          157 t
ORIGIN      
        1 aatcgtcagc tcctgaagac cccgaagatg gggtcatcac ctcatgcgcc aggaccaggc
       61 acctggttac gttcgttgca tcagcattct ccgcacgacg aatgaggcag ttatgaccct
      121 gcgaagcaga ttcttcgcca tgacgtacga ccgtcagatt gccagggccg agaaggccgg
      181 gctgcgcgcc taccgggagg cagtgctcgc tggggcgcac ggccaggtgc tcgagatcgg
      241 cggcgggacg ggcgccaacc tgcgcttcta cggcccggct gtcgaatccc tgaccctgac
      301 cgagcccgag actccgatgc tgcgccgcct ggaacgcaaa gcgcgtgcac agacgccagc
      361 agccaaggtg ttgcgcgcac cggcagagga tctgcccttc gatgacgaca ccttcgacgt
      421 agcggtctcg acgctggtgc tgtgcggggt ggacgaccag ccgcgggcac tgcgggagct
      481 gcgccgggtg ctgcgtcccg gcggccagct gctgttcatc gagcatgtgc gttccaccaa
      541 ccccgagctg gcccggttcc aggaccgtat gaactggatc aaccggttcg tcgtcggctg
      601 tgactgcaac cgcccgacgc tcgactccct ccaacaagcg ggcttcacca tcgcccaagt
      661 cgagcacact acgttgccca aggctccgaa attcgcgcgc ccagccatcg tgggcagcgc
      721 cacggccccg gcaagtgtgc cgtcccggga cgcccagcta gccaccggaa accggccgta
      781 acccgcacct gccgcccgaa agttcggcca ctggtcctgc gcgatgcggc gccaacgcaa
      841 tcgggcacag acgccccggc gcaccgcgca gatcatgacg atgccacgtg taatagtcat
      901 cgctgtcctg ctgtcgcggg ggtagcagct agtcctagac aagcattccg cggcgggcct
      961 gccctgcagc actgacaggc ggagccgcag aaacccataa atggatgatc tg
//
LOCUS       DASRPQ010001900         3183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_530332, whole genome shotgun sequence.
ACCESSION   DASRPQ010001900 DASRPQ010000000
VERSION     DASRPQ010001900.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3183
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_530332"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..630)
                     /locus_tag="VFD73_21555"
     CDS             complement(<1..630)
                     /locus_tag="VFD73_21555"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HZI76558.1"
                     /translation="MALALSLAAAFTPEAPAPIDSVISYIESELSHQHIPGVSVAILR
                     GDSVLLSRGFGFANVELHVPASDSTIYQSGSMGKQFTGALVATLAQQGRLRLDDYVTR
                     WLPEGKGVWDSITVRHLLTHTSGVTEYTDSTFDYRKDYTEDQLVRFAAARPLDFRPGS
                     RWSYSNTGYLLLGVLVHRVTGRFYGDLLRELIFSPVGMRSTRIISDADIV"
     gene            complement(688..1197)
                     /locus_tag="VFD73_21560"
     CDS             complement(688..1197)
                     /locus_tag="VFD73_21560"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI76559.1"
                     /translation="MDARVAPLAMLYQLNTDLLLNCLDSLSDAEAQTRLEAGGNSITF
                     LAAHLTDTRHFLTGRLEQPLFNPLARYLADVRSIEEIREWPSLEEIRSAWLGVSAHLQ
                     TVLSRLTVEDLVRSNVHRFPVEDTTTLGMIAFLVQHDSYHLGQVAFLRRQLGKPPMSY
                     ARRTPLAPA"
     gene            complement(1197..1637)
                     /locus_tag="VFD73_21565"
     CDS             complement(1197..1637)
                     /locus_tag="VFD73_21565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76560.1"
                     /translation="MRVILLLLLSTTVGCSNFGTTARLPADWDQRLQREGVLRSANDL
                     TFRYTLAPGRSRSHWEDRRASIVVTPATILIHKNAKIGLEVTPRTLRPVAIERDGSRV
                     RIRAGSGRAEELWSFQPPDGDVIGWTRDLRAVISRNSKPGSGGR"
     gene            complement(1700..2551)
                     /locus_tag="VFD73_21570"
     CDS             complement(1700..2551)
                     /locus_tag="VFD73_21570"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HZI76561.1"
                     /translation="MPVVKARVDASEALRTRCRVFRRMHQTGCFVIPNPWDVGSARLL
                     VRLGFPALATTSSGFAWSLGRPDNGVSLEEALAHFQAVAGAVGVPVNGDFEGGFAVEP
                     EQVARNVAAAATTGISGLSVEDSTGVPSAPLHEFSLALDRVRAARRAIDESGTELVLT
                     ARSEGFIVGRPDLAETIRRLEAYAEAGADCLYAPGLRTRDQILAVVRAVSPKAVNVLV
                     GGEPASVSELAELGVRRISVGGALARTAWTGFLAAAKELAEQGTFTSLARAIPFAEIN
                     QAFTNEG"
     gene            2634..2987
                     /locus_tag="VFD73_21575"
     CDS             2634..2987
                     /locus_tag="VFD73_21575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76562.1"
                     /translation="MRALLRYSILLLVLTAAACQAHNTGTASPSDQTRAKIDNRASLD
                     MDVSVARNDGRSSPLGLAPAGETTTFALPVSMTAGAAWVRFQAKPVRGSGETTVSEPF
                     PVKAGDEITWSISPQ"
BASE COUNT          650 a          990 c          972 g          571 t
ORIGIN      
        1 aacgatgtct gcatcggaga tgatccgggt gctccgcatg cccaccggcg aaaagatcag
       61 ctctcgcagc agatcgccgt agaaacggcc agtgacccga tggaccaata cgccaagcaa
      121 gagatatccg gtgttgctgt agctccagcg acttccagga cgaaaatcga gtggccgagc
      181 ggcggcgaag cggaccagct ggtcctccgt ataatcctta cggtagtcga atgtggaatc
      241 ggtatactcg gtgacaccgg aagtatgggt caacaaatgg cgcaccgtaa tgctgtccca
      301 tacccctttt ccttcgggca gccagcgggt gacgtaatca tccagccgca ggcggccctg
      361 ctgcgcgagc gtggctacca acgcgccggt aaactgcttt cccatcgagc ctgactgata
      421 gatcgtacta tcgctggccg gaacgtggag ctcgacattg gcaaagccga agcctctcga
      481 gagcaggacg ctgtcacccc gcaggattgc aaccgaaact ccagggatat gctgatggct
      541 gagctcggat tcgatatagg agatcacgga atcgatcggc gccggcgcct cgggcgtgaa
      601 tgccgcggcc aacgacaatg cgagcgccac taagctcaaa ccaaacctcc attctgacga
      661 gagtgcattt tgaggatcgg agcccggcta agctggggct aacggggtcc ggcgtgcgta
      721 ggacatcgga ggctttccca actggcggcg aagaaacgcc acctgcccca ggtgatatga
      781 atcgtgctgg accaggaagg cgatcatccc cagcgtggtc gtgtcctcca ctggaaagcg
      841 gtgcacgttg gatcggacga gatcctcgac cgtcaatcgg gagagtaccg tttggaggtg
      901 ggcactgacg ccgagccacg ccgatcggat ctcttccagc gagggccact cccggatctc
      961 ctcaatgctg cgcacgtctg cgagatatcg ggccagcgga ttgaacaatg gctgctccag
     1021 tcgcccggtc agaaagtgtc gagtgtcggt gagatgggca gcgagaaagg tgatactgtt
     1081 tccgcctgcc tccagccggg tttgcgcttc cgcatcggac aaactatcca ggcagttcaa
     1141 gagcaaatcg gtgttgagct gatataacat ggcaagcggt gcaacgcggg catccatcag
     1201 cggcctcctg atccgggctt gctgttgcgg ctgatgaccg ctcgcaggtc ccgggtccag
     1261 ccgatgacgt ccccatcggg tggttggaac gaccacagct cctccgcgcg cccacttcct
     1321 gcccgtatcc gtacccggct tccgtcgcgt tcgatggcga ccggccgcag cgttcgggga
     1381 gtgacctcca gcccgatctt cgcgttcttg tggatcagaa tcgttgccgg agtgaccacg
     1441 atggaggcgc ggcggtcctc ccagtgactc cggcttcgtc caggagcgag ggtatagcga
     1501 aaggtcaggt cgttcgcgct gcggagcacc ccttcgcgct gcaatcgctg gtcccagtct
     1561 gccggaagtc gcgccgtcgt cccgaagttg ctgcagccga cagtggtgct cagcaggagg
     1621 aggaggatga ctcgcatgag aaagatgtta ggatatttcg gcgagattgg taaggcgcac
     1681 gcggcaagcg gaaaaccctt catccttcgt tggtaaaggc ctggttgatc tcggcaaacg
     1741 gaatggcgcg ggccagcgat gtaaacgttc cctgctccgc aagctccttg gcggcggcga
     1801 gaaatccggt ccaggcggta cgcgcaagag caccgccaac actgatccgg cgaactccca
     1861 gttccgccag ctcactgacc gaagcaggct ccccgcccac cagtacattc accgctttcg
     1921 gggacaccgc ccgtaccaca gccaggatct ggtccctggt tcggaggcct ggagcataca
     1981 ggcagtctgc cccagcctcg gcgtaggcct ccagccgccg aatcgtctcc gcgagatcgg
     2041 ggcgtccaac gatgaatccc tccgagcggg cagtcagcac gagctccgtc ccactttcgt
     2101 ctatggcgcg gcgtgcagcc ctgactcggt cgagcgcgag cgaaaactcg tgcaacggcg
     2161 cggacggaac accggtggag tcctcgaccg agagccccga gatgcccgtg gttgcggccg
     2221 cggcgacatt cctcgccacc tgttcgggct cgaccgcaaa gccaccctcg aaatcaccgt
     2281 tgaccggcac ccccacggct ccggccaccg cctggaaatg cgccagagcc tcctccaggg
     2341 agacgccgtt gtccgggcga ccgagagacc aggcgaaccc ggagctggtc gtggcaagag
     2401 cgggaaagcc cagccgcacg agaagccgtg cgcttcccac gtcccaggga ttcgggatta
     2461 cgaaacaccc ggtctggtgc attctgcgga agacgcgaca acgcgttcgc aatgcttccg
     2521 aagcatcgac tcgagctttg accacgggca ttgaaaccct cctgtctcac ctactggagt
     2581 cggcgggcac tccagactaa ggttgatgga atccgtctac cgcgagctga cctatgcgcg
     2641 ctctcctccg ctattcaatt ctccttctgg tgctgaccgc ggcagcgtgt caggctcaca
     2701 ataccggaac cgcgtctccg tctgaccaga ccagggccaa gatcgataac cgcgcgtcat
     2761 tggacatgga cgtatcagtc gcccggaacg acgggcgatc cagcccgctc ggcttggcgc
     2821 cggccggcga aaccaccacc ttcgcgctgc cggtatcgat gaccgccggt gcggcctggg
     2881 ttcggttcca ggcgaagccg gtgcgcgggt cgggtgagac aacggtgagt gagccgtttc
     2941 cggtcaaggc gggagacgaa attacctggt cgatatcgcc gcagtaagag tcgagagtcg
     3001 agaattgaga gtcgagtcaa aagtcgaaag tcgaaagccg acagcatcag ctagcgaaga
     3061 caccttcctc gcgacttttg actctcgact ttgacttttg actctcgact ttcgacttaa
     3121 cccatccaaa tgcccggggc gggactcgaa cccgcacggg gttgccccca agggatttta
     3181 agt
//
LOCUS       DASRPQ010001901         2805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2408134, whole genome shotgun sequence.
ACCESSION   DASRPQ010001901 DASRPQ010000000
VERSION     DASRPQ010001901.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2805
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2408134"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(148..738)
                     /locus_tag="VFD73_21580"
     CDS             complement(148..738)
                     /locus_tag="VFD73_21580"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020046524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HZI76563.1"
                     /translation="MTDFFAHESSYIDDGATVGAGTKIWHFCHVMAGAVIGERCNLGQ
                     NVVVMPGTRLGDNVKVQNNVSIYEGVTLEDDVFCGPSCVFTNVVNPRSHVSRKAEYQK
                     TLVQRGASIGANATILCGITLGEYSFIGAGAVVRSDVPAFALMVGVPARRVGWMCRCG
                     VRLQLRDGRATCSTCGTAYQETNGFLRLIDRPGASG"
     gene            complement(731..1684)
                     /gene="murB"
                     /locus_tag="VFD73_21585"
     CDS             complement(731..1684)
                     /gene="murB"
                     /locus_tag="VFD73_21585"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: protein motif:HMM:NF010480.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HZI76564.1"
                     /translation="MTARDPSFVAELRKRVSGSVRENEVIARYSTYRIGGPATVLLPR
                     TGEDVAAALKLAAETGVSWFALGLGSNILLPDDGLDALVIRMGKGLDRLEQNQDQWRI
                     GAGLPAPLAARRTAEAGFAGLHIFVGVPGTVGGGVYMNAGCHGGDWSEVVESVTVVDG
                     AGTDSVLSRREIPFTYRRSGLDRRIVLETTVRLRPEEPDRLEEAVAEMFEWRQRGTPF
                     NQPCCGSVFKNPAGPSWKREDGPRTAGQLIEAAGLKGFSMGGAQVSPMHANYFVNTGG
                     ARAADVRKLISHVQQRVQERFGVRLEPEVKLIGPRGEYMHD"
     gene            complement(1681..>2805)
                     /locus_tag="VFD73_21590"
     CDS             complement(1681..>2805)
                     /locus_tag="VFD73_21590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HZI76565.1"
                     /translation="YPVLVRPSYVLGGRAMEIVYDDPSLRSYFARAARVAPEHPVLID
                     SFLEDAFEADVDAIADGTRCVIGGVMQHIEDAGIHSGDSACVLPPYLITEAQVEEMRR
                     HTRSFAERLGVVGLLNVQFAIKNQVVYVLEVNPRGSRTIPFVSKTTGVPLASLAASVM
                     VGKSLDELGLHDDVLQPYVAVKEAVFPFSKLQGVDLILGPEMRSTGEVMGIADSFGLA
                     FAKAQISADGALPLQGAVFVTVNDHDKASVVPIARRFHALGFRILATEGTARYLRARG
                     IPTERVLKVYQGRPNAVDLLLSGQIQLLINTPLGKLTQQDDYTIRRAALQHRVPYTTT
                     LSAASAACDAIIALRSRTGEVRPLQEWHALAREMSPEWTG"
BASE COUNT          528 a          939 c          852 g          486 t
ORIGIN      
        1 gcgccaccag gtccagtagg ggaacgttca ctcggccctg acctttgctc cgccctgccg
       61 gacggtcatg tggaacgcgc ccgcgattca gccgcatggc cgagcccggg cgcgttcaat
      121 tcatggaacc atcgatagcc atggaactta gccagatgca ccgggtcggt caatcagtcg
      181 gaggaatcca ttggtctcct ggtaggcagt gccgcaggtg gagcacgtgg cccggccgtc
      241 gcgcaactga agccggactc cgcagcgaca catccacccc accctgcggg ccggcacccc
      301 caccatgaga gcaaatgctg gcacgtcgct tcgaaccacg gccccagcac cgataaagct
      361 gtactcgccg agagtgatgc cacacaggat tgtggcgttg gcgccaatgg aggcgccccg
      421 ctgtaccagc gtcttctggt actcggcttt gcgggagacg tggctccggg ggttcaccac
      481 gttggtaaag acacagctgg gcccgcagaa gacatcgtct tccagcgtca ccccttcgta
      541 gatcgaaacg ttgttctgga ccttgacgtt gtcacccaga cgggttcccg gcatgaccac
      601 gacgttctgc cccagattgc agcgctcgcc aatgaccgct ccggccatca cgtggcagaa
      661 gtgccagatc ttggtgcccg ccccgaccgt ggcaccatcg tcgatgtagg aagactcatg
      721 ggcgaaaaag tcagtcatgc atgtactccc ctcgaggtcc gatcagcttg acctccggct
      781 ccagccgcac cccgaatcgc tcctggacac gctgctgcac gtgcgagatc agctttctca
      841 cgtcagccgc tctggctcct ccggtattca caaagtagtt cgcgtgcatc ggcgagacct
      901 gcgcccctcc catggagaag cccttgagtc cggcggcctc gatcagctgg cccgcggtcc
      961 gcggaccatc ctccctcttc cagctggggc cggccgggtt cttgaataca ctgccgcagc
     1021 acggctgatt gaatggcgtt ccgcgctggc gccattcgaa catttccgcc accgcctcct
     1081 ccaggcggtc cggctcctct gggcggagcc ggaccgtcgt ctcgagcacg attcgtcgat
     1141 ccagcccact gcgacgatag gtaaaaggaa tttcccgcct ggacagaacg ctgtcagttc
     1201 cggctccgtc gacgacggtc acgctctcga ccacctccga ccaatcgccg ccgtgacacc
     1261 cggcgttcat gtacacccct cctccgacgg tgcccggcac ccccacgaag atgtgcagac
     1321 cggcaaatcc ggcttcggcc gtgcgccgag cagccagcgg cgccggcaga ccggcaccga
     1381 tgcgccactg atcttgattt tgttccagcc gatccagccc tttccccatc cgaatgacga
     1441 gggcatccag gccatcgtcg ggcaacaaaa tgttggagcc aagtccgagg gcgaaccagg
     1501 acaccccagt ctccgccgcc agcttgagcg cggcagctac atcttcgccg gtccgaggaa
     1561 ggagcacggt ggcgggtcca ccgatacggt aggtcgagta acgcgcgata acttcgttct
     1621 cgcgcacgct gccgctgacg cgcttacgga gctcggcgac aaaactaggg tcacgggcag
     1681 tcacccggtc cactccggag acatctcgcg ggccagagca tgccactcct gcagcgggcg
     1741 aacttcaccg gttcggctcc gcagcgcgat gattgcatca caagcggccg aagcggcaga
     1801 aagcgtggtc gtgtagggta cccggtgctg cagcgccgcg cgccgaatgg tgtaatcatc
     1861 ctgttgggta agctttccga gcggcgtatt gatcagcagc tggatctgac cggagagaag
     1921 aaggtccacc gcattgggcc ggccctggta caccttgagc acacgctcgg tcgggattcc
     1981 ccgggcccgg agataccgtg ccgttccctc ggtcgcgagg atccggaagc cgagggcatg
     2041 aaaccgccga gcgatgggaa cgacgctcgc cttgtcgtga tcgttcaccg tgacaaacac
     2101 cgcaccttgg aggggcaacg ctccgtcggc cgagatctgg gccttggcga aggccaatcc
     2161 gaacgagtcg gcgatgccca tgacttcgcc ggtggagcgc atttcgggac ccaggatcag
     2221 atccactcct tggagcttgc tgaaaggaaa caccgcttcc ttgactgcca cgtacggctg
     2281 cagcacatcg tcgtgcaagc cgagctcatc cagagatttt cccaccatga ccgaagcggc
     2341 cagactggcc agcgggacgc cggtggtctt ggagacgaat ggaatggtgc gcgagccgcg
     2401 cgggttcact tccagcacgt aaacgacctg gttcttgatc gcgaactgca cgttcagcag
     2461 cccgacgact cccagccgtt cggcgaacga gcgggtgtgc cggcgcatct cttcgacctg
     2521 cgcctcggtg atcaggtacg gtggcaagac gcaggcggag tcgccggagt gaatgccggc
     2581 gtcctcgatg tgttgcatga caccaccgat gacgcaccgt gtcccgtccg cgatcgcgtc
     2641 gacgtcggcc tcgaaagcgt cctccaggaa gctgtcgatc aggacgggat gttccggcgc
     2701 cacccgggcg gcgcgcgcga agtagcttcg gagggagggg tcatcgtaga cgatctccat
     2761 ggctcgccca cccaggacat aggagggccg caccagcacc gggta
//
LOCUS       DASRPQ010001902         1069 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1814884, whole genome shotgun sequence.
ACCESSION   DASRPQ010001902 DASRPQ010000000
VERSION     DASRPQ010001902.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1814884"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            68..373
                     /locus_tag="VFD73_21595"
     CDS             68..373
                     /locus_tag="VFD73_21595"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI76566.1"
                     /translation="MRTRRRFTPEFKAKVVLEVLTGGQSPAEACRRHVLSPNLLGLWK
                     ATFLERAHTLFQPDEQRDEDQARIAELEQLLGRATRQIEILKKASTLLDAASTRGGR"
     gene            370..>1069
                     /locus_tag="VFD73_21600"
     CDS             370..>1069
                     /locus_tag="VFD73_21600"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZI76567.1"
                     /translation="MIDILKDDYSIRLLCEALDVHRCNLYHRPRPDEDRPIRDALKEL
                     AGAWPTYGYRRLTAMLRRQGLRVNAKRVRRLMHELGICGEAPRRVPRTPDSGHGYPRF
                     DNLVEGLEVGRPDQVWVADITYIRLRKEFVYLSVIMDIFTRCIRGWHLGRSLEQELTL
                     TSLERALEGGCPEVHHSDQGVQYAATAYVDLLRSKGVRISMASVGEPEENGYAERLMR
                     TIKEEEVDLSEYEDF"
BASE COUNT          211 a          300 c          380 g          178 t
ORIGIN      
        1 ctgaagtgcg ccccggaatt cagaccagtg cataatgggg gtagagaccc cgaggaggcg
       61 cactggaatg agaacgcggc ggcgattcac acccgagttc aaggccaagg tggtcctgga
      121 ggtgctgacc ggggggcagt caccggctga ggcgtgccgt cggcacgtcc tcagccccaa
      181 tctgctgggc ctgtggaagg cgaccttcct ggagcgagcc cataccctgt tccagcccga
      241 cgagcaacgc gatgaggacc aggcccggat cgctgagttg gagcagctcc tgggccgggc
      301 cacgcgccag atcgagatcc taaaaaaagc ctcgacgctg ctggatgcgg cctcgaccag
      361 aggagggaga tgatcgacat cctcaaggat gattactcga ttcgtttgct gtgcgaggcc
      421 cttgatgtgc accgctgcaa cctgtaccac cgaccccggc cggacgagga ccggccgatc
      481 agagacgcct tgaaggagtt ggccggcgcc tggcccacct acggataccg tcgcctcacg
      541 gcgatgctcc ggcgccaggg cctgcgggtc aacgccaagc gggtgcggcg gttgatgcac
      601 gagctgggga tctgtggcga ggccccgagg cgcgtgccgc ggacgccgga cagcggccac
      661 ggctatccac ggttcgacaa cttggtcgag ggcctggagg tggggcgtcc cgatcaggtc
      721 tgggtggcgg acatcacgta catccgattg aggaaggagt ttgtctattt atcagtgatt
      781 atggacatct tcacgcggtg tatccggggc tggcacctgg gccggagcct ggagcaggag
      841 ttgacgctca cgtccctgga gcgagccttg gaagggggat gcccggaggt ccatcattcc
      901 gatcaggggg tgcaatatgc cgcgacggcc tacgtcgatc tgctgaggtc caaaggggtg
      961 cggatcagca tggcgagcgt gggcgaaccc gaagagaatg gatatgctga gagattgatg
     1021 aggacgatca aggaggagga ggtcgacctc tcggagtacg aggacttcg
//
LOCUS       DASRPQ010001903         1403 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1494672, whole genome shotgun sequence.
ACCESSION   DASRPQ010001903 DASRPQ010000000
VERSION     DASRPQ010001903.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1403
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1494672"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1379)
                     /locus_tag="VFD73_21605"
     CDS             complement(<1..1379)
                     /locus_tag="VFD73_21605"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HZI76568.1"
                     /translation="MGISYRGWLAGLAGVAPHPALKAISPQAPVTDVWMGDDFFHQGA
                     FRQSQGVEYTAFMERDPKGFTDLPMPEYDHFEFYLKYPTLDSLARATDVLKLPSWIGF
                     STHPAYDRYWRERAMQNVLTRPEVPILFVGGFWDQEDLLGPELAYRTVEKADAKGWNH
                     LVLGPWFHGGWAQPAGDSLGPLPLGSNTAEFFRRKIQRPWFAYYLHGKGDGRFPEAWI
                     FETGENQWHTFDSWPPKTAQLRSIYLLENGRLSFTGERHAARSAEQGRTNSVGPAHTA
                     SYDGYISDPGRPVPYLPRPDDGSGWRTWLEQDQRFVDGRPDVLTWKSEPLAGDFTIAG
                     DVVAHLFASTTGSDADWVVKLIDVFPDSVPESPRLGGYELMVNADIMRGRYWKSFSRA
                     TPIPANTVTPFTVDLHQQLYRFRPGHRIMVQVQSTWFPLYDRNPQTFVPNIFRATASD
                     FRAQEHRIW"
BASE COUNT          250 a          441 c          462 g          250 t
ORIGIN      
        1 tgccagatgc gatgctcctg cgcccgaaag tcggacgccg ttgctcggaa gatgttcggc
       61 acaaatgtct ggggatttcg gtcgtagagc ggaaaccagg tgctctggac ctgcaccatg
      121 atgcggtgac ctgggcgaaa acggtagagc tgctggtgca ggtccaccgt aaacggcgtc
      181 acggtgttgg ccgggatcgg cgttgcccgg ctgaagctct tccagtatcg gccccgcatg
      241 atgtcggcgt tcaccatcag ctcgtagccg ccgaggcgag ggctctccgg cacgctgtcg
      301 gggaagacat cgatgagctt gaccacccaa tccgcatcgc tgccggttgt gctggcgaac
      361 aggtgggcca cgacgtcgcc cgcgatggtg aagtcaccgg cgagcggctc cgacttccag
      421 gtcagcacat cggggcgacc gtccacgaag cgctggtcct gctccagcca ggtgcgccag
      481 ccgctgccgt cgtcggggcg agggagatag ggaactggac gccccggatc ggagatgtac
      541 ccgtcgtagc tcgcggtgtg ggccggcccg accgagtttg ttctcccctg ctccgccgat
      601 ctggcggcgt gccgttctcc ggtgaacgag agcctcccgt tctccaggag atagatactc
      661 cgtagctggg cagtcttggg tggccaggag tcgaaggtgt gccattggtt ctcgccggtc
      721 tcgaagatcc aggcttcggg aaaccggccg tcgcccttgc cgtgcaggta gtacgcgaac
      781 cagggccgtt ggatcttccg ccggaaaaac tcggcggtgt tgcttcccag agggaggggg
      841 cccaacgaat cgccggccgg ctgagcccag ccgccgtgga accagggacc gagcacgagg
      901 tgattccagc ccttcgcatc ggccttttcc acggtgcgat aggcgagctc gggcccgagc
      961 aaatcttcct gatcccagaa gccacccacg aagaggatcg gcacctcagg ccgggtgaga
     1021 acgttctgca tcgcccgctc ccgccaatac cgatcgtatg ccggatgagt gctgaagccg
     1081 atccaggatg ggagcttcag cacatcggtg gctctggcca gcgaatccag ggtgggatac
     1141 ttgaggtaga actcgaagtg atcgtactcc ggcatgggca ggtcggtgaa accctttggg
     1201 tcccgctcca tgaacgcggt gtactcgacg ccctgcgact ggcggaatgc gccctgatgg
     1261 aagaagtcgt ctcccatcca gacgtcggtc accggcgcct gcggtgagat cgccttcagc
     1321 gcggggtgag gtgccacccc ggccagaccc gccagccaac cgcgatacga gatccccaat
     1381 acgccaacct tcccgctgtt gcc
//
LOCUS       DASRPQ010001904         3641 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1494733, whole genome shotgun sequence.
ACCESSION   DASRPQ010001904 DASRPQ010000000
VERSION     DASRPQ010001904.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3641
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1494733"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..1201)
                     /locus_tag="VFD73_21610"
     CDS             complement(149..1201)
                     /locus_tag="VFD73_21610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76569.1"
                     /translation="MTGSENALVPDAGLFRPYKESSCGAVQLAIAALAAFVLATPATA
                     QFGALKKKIKKAAGPEDSTGASHGANANTAAPAQGGTIVLTSDVVNQLVTGLKAGQAE
                     RDAAAKDDSPYPRYIRGKKAYAVAKPKCEAAQAGWPQRAAANQKLNDKYSRLTQKMVD
                     AMQKQDQKTAAIYQDSAMAMMDPSCVVKEPEQPKDYYETERAIELRAENAEVKASGWT
                     AAELAMVKERTDAILRGTPAADISASEKAAVSAKAAELKPLMGIEEQPVARAQKPAPA
                     PTSVAAPTPQVDAQTSAGSSDMSNCMMKNMQTHQPQLEALGQRAQAAQKAGDQAAMMA
                     IADTVQQIQMAGCMKR"
     gene            1358..3244
                     /locus_tag="VFD73_21615"
     CDS             1358..3244
                     /locus_tag="VFD73_21615"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HZI76570.1"
                     /translation="MRQHLWAAVLAAVWGTPVSAQQPADSAAPLFKLEEVMVPVRDGV
                     HLQTVILTPLQQSGPLPILFTRTPYGVPDKAPTRTPTSYKELVQDGYIFVFQNLRGRF
                     KSEGVFKLSSWVDLADSSATNETTDAYDSIEWLIKHVPNNNGKVGMYGVSYDGLTTAL
                     AMLKPHPALKAVSEQASPVDQWMNDDMHRYGALRESYAFEYSVLEQADKNQNTNFDFD
                     EYDTYEWYLDLGPLSNANARYLKNKIPYWNDIVAHPDYDEYWKHEAWIRQLHATTVPN
                     LNVAGFWDQEDPWGPWQIFRHAEEHDPDHTNFMVAGPWFHGEWQHSKADSIGLISFGG
                     HDTAREFREQIQAPFFRYYLHGQGDKPAWQARTFQSGSNTWKTYDAWPPKNTASRKLY
                     LQSDGSLSFDAPAAASAGGRDYREYISDPANPVPYRERPISPTYPGGDWRTWEVADQR
                     FVDGRPDVLTYVSKPLEQDLTVTGELAAYLYASTSGTDGDFIVKLIDVYPEKAQPVAW
                     DKDEGPKPGQYEESVNGYELPIAMEVRRGRYNVSFEHPRPLKANAPVRWEIPLRDHDH
                     VFLKGHRLMVQVQSTWFPIIDRNPQKFVPSIYKAKASDYVKATQRIYSSPALPSQVVL
                     SVVR"
     gene            complement(3266..3523)
                     /locus_tag="VFD73_21620"
     CDS             complement(3266..3523)
                     /locus_tag="VFD73_21620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76571.1"
                     /translation="MSKHDRLAHIIEVYLAGDLELATAAAELLHVYVERGWRFSLIEA
                     ECEPHYQEPMRALARRVDDEVLARRKSRDPGVFVDPPIVIR"
BASE COUNT          640 a         1194 c         1130 g          677 t
ORIGIN      
        1 gtggccgggc gctcggcgga cccgctcgcg gtggccaccg cgagcgggtc cgccgagcgc
       61 ccggccacgg ggcgcgaggc ggccgcgccg cttgcgatag cagccagcaa actcaccagc
      121 ccgacacggc gcaacgagcc catcgggtct atcgcttcat gcagccggcc atctggatct
      181 gctgcaccgt atcggcaatt gccatcatgg ctgcctgatc tcccgctttc tgcgctgcct
      241 gggcgcgctg acccagggcc tcgagctggg gctggtgggt ttgcatgttc ttcatcatgc
      301 agttgctcat gtcggaagag ccggcagagg tctgcgcgtc tacctgaggc gttggtgcgg
      361 caaccgacgt gggcgccggt gccggcttct gagcccgcgc gaccggttgc tcctcgatgc
      421 ccatcagcgg cttcagctcc gcggccttgg ccgataccgc ggccttctcc gaggccgaga
      481 tgtcggcggc aggagttccc cgcagaatcg catcggtccg ctcctttacc atcgcgagct
      541 cagccgcggt ccagccggag gccttcactt cggcattctc cgctcgcagt tcgatagcgc
      601 gctccgtctc gtagtaatcc ttcggctgct ccggctcctt caccacacag ctcgggtcca
      661 tcatcgccat tgccgaatcc tggtagatcg cggcggtctt ctgatcctgc ttttgcatcg
      721 catctaccat cttctgcgtc aaccggctgt acttgtcgtt cagcttctgg ttggccgccg
      781 cccgctgagg ccagcccgcc tgggccgctt cgcacttcgg cttggccacg gcataggcct
      841 tcttcccccg gatatagcgg ggatagggag aatcgtcttt ggcggctgca tcccgctccg
      901 cctgacccgc tttgagcccg gtgacgagct ggttcaccac atcgctggtc aggacgatgg
      961 tcccgccctg tgccggagcc gccgtgttcg cgttggctcc atgtgatgct cccgtggagt
     1021 cctccggacc cgccgccttc ttgatcttct tcttcagagc gccgaactgg gctgtggccg
     1081 gagtggcgag cacgaaggct gcgagagcgg cgatcgcaag ttggactgct ccgcatgagc
     1141 tctccttgta cggtcggaac aagcccgcgt cagggacgag agcgttctca ctgcctgtca
     1201 agatcggggc actaatttcg tcgcgcggcg gctttggcgc cagcggcgga ttcggtagct
     1261 cgcgccgtca accgatcggt gccaggcggg acaatgtcgc ggtgatcgcc tacattggtt
     1321 cgtccgccgg gagcattctt tcgtgcgagg aggaccaatg cgccagcacc tgtgggcggc
     1381 cgttcttgca gcagtgtggg gaactcccgt cagcgcgcag caacctgccg attccgcggc
     1441 tcccctcttc aagctggaag aggtgatggt cccagtccgg gacggagtcc atctccagac
     1501 cgtgatcctc acgccgctgc agcagagcgg gccgcttccg atcctgttca cccgaacacc
     1561 gtatggcgta ccggacaagg cccccaccag gactcccacc tcgtacaagg agctggtgca
     1621 ggacggctac atcttcgtgt tccagaacct gcgaggacgg ttcaagtcgg aaggagtgtt
     1681 caagctctcc tcctgggtcg acctggccga ctccagcgcg accaacgaga cgactgacgc
     1741 gtacgacagc atcgagtggc tgatcaagca tgtgccgaac aacaacggca aggtgggcat
     1801 gtacggcgtt tcttacgatg ggctcaccac cgcgctcgcc atgctcaagc cgcacccggc
     1861 gctcaaggcg gtcagcgagc aggcctcacc ggtagaccag tggatgaacg acgacatgca
     1921 ccggtacggc gcgctccggg agagctacgc cttcgagtac agcgtcctgg agcaggccga
     1981 caagaaccag aataccaact tcgatttcga cgagtacgac acttatgagt ggtatctcga
     2041 tctgggaccg ctctcgaatg cgaatgcccg gtacctcaag aacaagattc cctactggaa
     2101 cgacatcgtc gcgcatcccg actacgacga gtactggaag cacgaggctt ggattcgcca
     2161 gctgcacgcg accacggtgc ccaacctcaa cgttgcgggc ttctgggatc aggaggatcc
     2221 ctggggacca tggcagatct tccgccatgc ggaagagcac gatcctgacc acaccaactt
     2281 catggtggcg ggcccctggt ttcacgggga gtggcagcat tccaaggccg acagcatcgg
     2341 cctgatctcg tttggcgggc acgacacggc gcgggaattc cgggagcaga tccaggctcc
     2401 attcttccgc tactatctcc acggccaggg tgataagccg gcctggcagg ctcggacttt
     2461 ccagtccggc tccaacacct ggaagacgta tgacgcctgg ccgccgaaaa acaccgccag
     2521 taggaagctg tacctccaga gcgatggctc gctgtcgttc gacgcgcccg ccgcagcctc
     2581 cgccggtggg cgggactacc gggagtacat ctccgacccg gccaacccgg tgccgtatcg
     2641 ggagcggccc atctcgccga cctatcccgg aggtgattgg cgcacctggg aggtggccga
     2701 tcagcgcttc gtggacggcc gtcccgacgt cctgacctac gtgagcaagc cgctcgagca
     2761 ggacctcacc gtcaccggag agctggccgc gtacctgtac gcctcgacct ccgggaccga
     2821 tggcgatttc attgtgaagc tgatcgatgt ctatccggag aaggcgcagc ccgtagcgtg
     2881 ggacaaagac gagggcccga aaccgggtca atacgaagag tcggtgaacg gctacgagct
     2941 accgatcgcg atggaagtaa gacgcggcag gtacaacgtg agcttcgagc atcctcggcc
     3001 cctcaaggcg aacgctccgg tcagatggga gattccgctt cgggatcacg atcacgtctt
     3061 cctcaaaggg caccggctga tggtccaggt gcagtcgacc tggtttccca tcatcgaccg
     3121 gaatccgcag aagttcgtgc ccagtatcta caaggccaag gcgagcgact acgtgaaggc
     3181 gacgcaacgg atctactcgt cgcccgcgct cccgtcgcag gtcgtgttat cggtcgtgag
     3241 gtagggcgga ccgttgcggc cccagttatc ggatgacgat cggagggtcg acgaagaccc
     3301 caggatcccg ggacttgcgc cgggccagca cttcgtcgtc cactcgccgg gcgagcgccc
     3361 gcatcggctc ttgataatgc ggttcgcact cggcctcgat cagggagaac cgccaccccc
     3421 gttcaacgta gacatggagc agctcggccg cggcagtcgc cagctcgaga tcgcccgcga
     3481 ggtagacctc gatgatgtgg gccagtcgat cgtgcttgga catggcgaat ctcctgtccg
     3541 aactattggc ttcgctcccg cttgaagtag aaatgcgctc gggtgccctc gctcgctacg
     3601 ctggccagtt cccagtgctc cgcgccgagc gcgttgaggt c
//
LOCUS       DASRPQ010001905         1249 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1815094, whole genome shotgun sequence.
ACCESSION   DASRPQ010001905 DASRPQ010000000
VERSION     DASRPQ010001905.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1249
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1815094"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            114..>1249
                     /locus_tag="VFD73_21625"
     CDS             114..>1249
                     /locus_tag="VFD73_21625"
                     /inference="COORDINATES: protein motif:HMM:NF015592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76572.1"
                     /translation="MIHHERLRLPHHDCPADEWNVIEKGFHPEFLAQFETMLALGNGY
                     LGMRGCPEEGGPNAENGTFINGFYEAWPIVYGEEAYGFAKAGQTIVNVTDSKIIKLFV
                     DDEPFWLPNARCVRYDRRLNMRSGTLDREILWETPAGKQVLITSRRLVSFVHRHVAAI
                     SYQVTLLNAAAPVVIASEMRADQPNASVPTDDPRQARAFAGRVLQYRASYAKERRVVL
                     CHATDTSQMILTCATDHALETACPHASKVVHTEDFGQVAFTLEARPDAPIHLTKYMVY
                     HTSQTASPAEVCGRAEWTLDRVMQQGFQPLLAAQEQYLEDFWRRSDVRISNLSSTRLT
                     RSTVEIQQAIRFNLFHILQASARAENTGVPAKGLTGQAYEGHSF"
BASE COUNT          238 a          414 c          389 g          208 t
ORIGIN      
        1 gcaaggggaa cgccgaggag cttcggcgtc atggcgccca tctggcggtg cacgatctgg
       61 gcgaactggt gcactgatcg cagacacatg ccatcaaggg aggtacggga ccgatgatcc
      121 atcatgaacg cctcaggctg ccccatcatg attgccctgc cgacgagtgg aacgtcattg
      181 aaaaagggtt tcaccctgaa ttcctcgccc agtttgaaac catgctggcg ctggggaacg
      241 gctacctcgg tatgcgcggg tgcccagagg aaggcgggcc caacgccgaa aacggcacct
      301 tcatcaacgg gttctatgaa gcctggccga tcgtgtacgg cgaggaggcc tacggcttcg
      361 cgaaggccgg ccaaaccatc gtgaacgtga ccgacagcaa gatcatcaaa ctcttcgtgg
      421 acgacgagcc cttctggctg cccaacgccc gctgcgtgcg ctacgaccgg cggctgaaca
      481 tgcggtccgg gacgctcgac cgggagatcc tctgggagac gccagccggc aaacaggtgc
      541 tgatcacctc ccggcgtttg gtctcgttcg tgcatcggca cgtggccgcc atctcctacc
      601 aggtgaccct cctcaacgcg gcggcccccg tcgtgatcgc gtcggagatg cgggccgatc
      661 agccgaacgc cagcgtcccc acggatgacc cgcggcaggc acgggcgttt gccggacggg
      721 tgctccagta ccgcgccagc tatgccaagg agcgtcgtgt cgtgctgtgc catgcgaccg
      781 acacgagcca gatgatcctc acgtgtgcca cggatcatgc gctggagact gcctgcccac
      841 acgcctccaa ggtcgtacac accgaggact ttggccaggt cgcctttacg ctcgaggccc
      901 gacccgacgc gccgatccac ctcaccaaat acatggtgta tcacacgtcg cagacagcgt
      961 cgcctgcgga ggtctgcggc cgtgcggagt ggacgctgga ccgcgtgatg cagcaggggt
     1021 tccagccgct gctcgccgcc caggagcagt acctggagga tttctggcgc cgcagcgatg
     1081 tccgcatcag caatctcagc agtacccgcc tcacgcgctc cacggtggag atccagcagg
     1141 cgatccgctt taacctgttt cacatcttgc aggcctcggc ccgggcggaa aacaccggcg
     1201 tgccggcgaa aggcctcacc ggccaggcct acgaggggca ttccttttg
//
LOCUS       DASRPQ010001906         2771 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_228867, whole genome shotgun sequence.
ACCESSION   DASRPQ010001906 DASRPQ010000000
VERSION     DASRPQ010001906.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2771
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_228867"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..832
                     /locus_tag="VFD73_21630"
     CDS             <1..832
                     /locus_tag="VFD73_21630"
                     /inference="COORDINATES: protein motif:HMM:NF012913.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HZI76573.1"
                     /translation="EKVGPYRIENWAMVPACHLGPEQLWALRNRVSQVAHSGEVQGIV
                     VTHGTDTLEETAYLLDRTLQLDVPVALTGAMRTSSDVAWDGPRNLVDAAVVAADAGSR
                     GRGAMVVFHHNVFAGRTAVKVHTTALDAFAAPHAAPIGRVANGRVSYSSGSDPNRPPR
                     LSGIPARVALVPAVIGDDGRLLDLARPHYDGVVLEAFGSGNLPPGLVPAIQRWLNEGK
                     PVVLASRCPLGQVTPLYAFEGGGSRLVEMGVVAAGARAPSQARMELAIALSAGISYGS
                     "
     gene            834..2021
                     /locus_tag="VFD73_21635"
     CDS             834..2021
                     /locus_tag="VFD73_21635"
                     /inference="COORDINATES: protein motif:HMM:NF025112.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76574.1"
                     /translation="MGFPARLDIPAPILEIARTLDGAGYEAWCVGGSLRDTLLGHPQT
                     DYDIATSARPDEVQRLFPRTVAVGIKHGTVGVLDRRRELHEVTTFRRDVLTDGRHAVV
                     QYGVSLEDDLARRDFTINAIAYHPLRHEWRDPFAGERDLRAGLVRAVGAPEQRFQEDF
                     LRILRALRFAARFDFAIDSATWEAAQAASSGLGQLSAERVREEWFKGVQTARSIHRLV
                     SLWIDVGAARVWLPELAATASQIKLLPEPGPGSRDPVLLTALLVPNPSSVLARLKSSN
                     AQIARAAAVEAGPEQPPALDEISVRRWMSAIGQALDDLTEIWQLRHGREAPWRQTSRS
                     IRDQGDPLTRADLAIDGSDLLALGVTGPAVGHILSALLERVLDNPRLNTREALLELAK
                     EIS"
     gene            2018..2737
                     /locus_tag="VFD73_21640"
     CDS             2018..2737
                     /locus_tag="VFD73_21640"
                     /inference="COORDINATES: protein motif:HMM:NF014582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HZI76575.1"
                     /translation="MSPVGFAVLAAAANVIGALAVVRHLRRGLRVIDACLGFGAGFML
                     AVTVLGVLPQVMDRPSNAAIYVLIGYLAVHLAQHVFTPHFHFGEETHHVSVSAGWSAL
                     LGLTLHTFFDGVAIASGFLVSSRLGVLLFLAVLLHKLPEGVTIASVMVAGGQSPRRAI
                     AAAAVLGAATVLGVLLTEGITPLARNGLALSAGVTLYVAASNLVPEFQGKRGWLTALA
                     FFGGAVGFFVTERLLTGLLQP"
BASE COUNT          429 a          873 c          919 g          550 t
ORIGIN      
        1 ggagaaagtg ggaccttatc gcatcgaaaa ctgggcgatg gttccggcct gccacctggg
       61 gccagagcag ctctgggcgt tacgcaatcg ggtgagccag gtggcgcact ccggcgaagt
      121 ccaaggcatc gtggtgactc atggaaccga taccctggaa gagaccgcgt acctgctcga
      181 tcggacattg cagttggacg tgcccgtggc cctcaccgga gcgatgcgca cgtcgagcga
      241 cgtggcctgg gatgggcccc gcaatctcgt cgatgcggcc gtcgtggccg cggacgccgg
      301 cagccgagga cgcggtgcga tggtcgtgtt ccaccacaac gtgttcgccg ggcggaccgc
      361 tgtgaaggtg catacgaccg ctctcgatgc ctttgccgct cctcacgccg cgccgatagg
      421 tcgtgtggca aacggacggg taagctactc cagcggaagc gatcccaacc ggccgccccg
      481 gctgagcggc atccccgcac gggtggcgtt ggttcccgct gtcattggcg atgatgggag
      541 gctcctcgat ctggcacggc cacactacga cggagttgtg ctcgaggcgt ttggcagcgg
      601 caaccttcct ccagggctgg tgcctgccat ccagcggtgg ctgaacgaag ggaagccagt
      661 agtgctggca agccgatgtc ctctcggaca agtcactccc ctgtatgcct tcgaaggcgg
      721 cggcagccgc ctcgtcgaga tgggtgtcgt cgcggccggt gctcgcgctc catctcaggc
      781 ccgaatggag cttgcgatcg cgctttcggc aggtatttcc tacgggagct agcgtgggct
      841 ttcccgctcg cttggacatt cccgctccca ttctcgagat tgcgcggacg cttgatggcg
      901 cgggatacga ggcctggtgc gtggggggaa gcttgcgtga caccttgctg ggccaccctc
      961 aaaccgatta cgacattgcc acgtctgcca ggcccgacga ggtccagcgc ttgttccctc
     1021 gcaccgtcgc ggtcggtatc aagcacggta ccgtaggcgt gctggatcgc cgccgcgagc
     1081 tgcacgaagt caccaccttc cgccgtgacg ttctgaccga tggccgtcac gccgtggttc
     1141 agtatggggt ctcgctcgag gacgacctgg cccgacgcga cttcaccatt aatgccatcg
     1201 cgtaccatcc gcttcgccac gagtggcgcg acccttttgc cggcgagcgt gatctccggg
     1261 ccggactggt gcgtgccgtg ggagcgccgg agcagagatt ccaggaggac ttccttcgga
     1321 ttctgcgggc cctgcggttt gccgcccgtt tcgactttgc gattgactcg gccacctggg
     1381 aggcggctca ggcggcgtcc tccgggctgg ggcagctctc ggcggagcgg gtgcgtgaag
     1441 aatggttcaa aggggttcag acggcgcggt cgatccaccg tctggtctca ctctggatcg
     1501 acgtcggcgc tgcccgggtg tggttgccgg aactcgcagc gacggcatca cagatcaaac
     1561 tcctgccgga gccaggcccc ggcagtcgcg atccggtgct gctgactgca ctgctggttc
     1621 cgaatcccag ctcggtgctg gcgcgactga aaagttcgaa cgcccaaatc gcccgtgctg
     1681 cggctgtcga ggctggaccg gagcagccgc cggccctgga tgaaatctca gtgcgccgtt
     1741 ggatgtcagc catcgggcag gcgctggatg atctcacaga gatttggcaa ctccggcacg
     1801 gccgggaagc cccgtggcgc cagacctcga gatccatacg cgaccaaggt gatcctctga
     1861 cccgagccga tctcgctatc gatgggagcg atcttttggc actgggcgtg accggaccgg
     1921 ccgtaggcca cattctctca gcattactcg agcgagtgct ggacaacccg aggctgaaca
     1981 cgcgggaagc acttttggag ctggcgaaag agatctcgtg agtccggtag gcttcgctgt
     2041 ccttgccgcg gcagccaacg tcatcggcgc gctggcggta gttcgccatc tgagacgcgg
     2101 tctccgggtc atcgatgcct gcctcgggtt cggggccggc ttcatgctgg ccgtcaccgt
     2161 gcttggggtg cttccccaag tgatggaccg cccttccaat gccgcgattt acgtcctgat
     2221 cgggtacctc gcggtgcacc tcgcacagca cgtgttcacc ccgcattttc actttgggga
     2281 ggagactcat cacgtcagtg tctccgccgg ttggtccgcc ctgcttggac tgacccttca
     2341 cacgttcttc gacggcgttg ccattgcgag tgggtttctg gtgtccagtc gccttggtgt
     2401 actgctgttt ttggcggtgc tgctgcataa actccccgag ggggttacca tcgcgagtgt
     2461 tatggttgcc ggcggccaga gtccccgccg ggccatcgcc gccgccgcag tgctcggagc
     2521 agcgacggtg ctgggcgtcc ttctcaccga agggatcact cccctggcgc gaaacggact
     2581 cgcattatcg gcaggtgtga ccctgtatgt cgcggcgtcc aacctggtgc ccgagttcca
     2641 gggcaagcgc ggctggctga ccgcgctggc gttctttggt ggcgcggtag ggttctttgt
     2701 aaccgaacgg ctgctgaccg gcttgttgca gccataggag gtcgtctgag gagacgctca
     2761 ccccgtgccg c
//
LOCUS       DASRPQ010001907         2441 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_847455, whole genome shotgun sequence.
ACCESSION   DASRPQ010001907 DASRPQ010000000
VERSION     DASRPQ010001907.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_847455"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..667)
                     /locus_tag="VFD73_21645"
     CDS             complement(<1..667)
                     /locus_tag="VFD73_21645"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI76576.1"
                     /translation="MNPDPLVLVVDDLAQNVRLLEAVLSPKGFRVATASSGEEALDML
                     SKEHPDVVLLDILMPGMDGYEVCRRIREDPGTAFLPVIMITASGEQEKIRAIESGADD
                     FVNKPFDQAELLARVRSLVRVKRYHDTIQRQAAELARWNCELEQRVQDQLEQLDRVSR
                     LRRFLPAQLADLIISSGDESFLNAHRREITVVCCDLRGFTAFAESAEPEDVWDILGEY
                     NGAL"
     gene            complement(664..1050)
                     /locus_tag="VFD73_21650"
     CDS             complement(664..1050)
                     /locus_tag="VFD73_21650"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI76577.1"
                     /translation="MTYVILVVEDNERNLKLLRDVLEYAGYDVRVARTAEDGITLAVS
                     EPPDLVLMDLQLPGIDGMEALRRLRESPRTADIPVVAVTAQAMKQDRERALDAGFNGY
                     VEKPITVRAFPDQVRRFLSGGEVGTE"
     gene            complement(1047..>2441)
                     /locus_tag="VFD73_21655"
     CDS             complement(1047..>2441)
                     /locus_tag="VFD73_21655"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI76578.1"
                     /translation="DDYLRDIWSSGKHLLELLNDILDLSKIEAGQMVLNRSEFGVGES
                     LEYCLSLVRERAIKQRILLSLEADPEVGLVNADRLRFRQVVLNLLSNAVKFTPDDGRV
                     QVRAAIRDQDLVVTVTDTGPGVPAEDRQRIFDSFQQGARLPGQTEGTGLGLTLSKRIL
                     ELHGGRIWVESEAGKGSTFGFALPARSGEPAWTSIPQVGLDSGIPAELAPGPGPTVVV
                     VEDDRRSFDLLRVYLEAAGARVVSARDGEEGLDTVRRLSPAGVILDILLPGIDGWEVL
                     AQLKADPRTAAIPVIVVSMLDERGRGSALGAAEYLVKPVGKDQLLAAVYRAAAMPEQK
                     HTVVAIDDDPLAIELVRASLEPEGWTVLGAATGQEGLALIREQQPSAVLLDLLMPGMD
                     GFEVVEALRADPATKSVPVVILTSKSMTQQDKERLQGRITYVARKTEFDLSGLAGLLR
                     WASTNRQSPAPEPG"
BASE COUNT          431 a          819 c          750 g          441 t
ORIGIN      
        1 ccagggcacc gttgtactcc ccgaggatgt cccagacgtc ctcgggttcc gccgattcgg
       61 cgaaggcggt gaagccacgc agatcacagc acaccaccgt gatctcccgg cggtgcgcgt
      121 tgaggaagga ttcatcgccc gagctgatga tgaggtcggc cagctgtgcc ggaaggaaac
      181 ggcgcagccg gctcacgcgg tccagttgct caagctggtc ctggacgcgc tgctcaagct
      241 cacagttcca gcgcgccagt tcggccgcct gacgctggat cgtgtcgtgg taccgcttga
      301 cccggaccag ggagcgtacc cgggccagca actcggcctg atcgaaaggc ttgttgacaa
      361 agtcgtcggc gccggactcg atggcgcgga tcttctcctg ctccccgctc gcggtgatca
      421 tgatcaccgg caggaaagcc gtccctggat cttcgcggat ccggcggcag acctcatacc
      481 catccattcc gggcatcaag atgtccagca gaacgacatc tgggtgctcc ttgctcagca
      541 tgtccagagc ttcctctccg gaggacgccg tggccacccg gaatcccttt ggcgatagca
      601 ccgcctcaag caggcggacg ttctgcgcca ggtcatccac gacgagtacg agcgggtccg
      661 gattcactca gtccccacct ccccacctga gaggaatctg cgaacctgat cgggaaatgc
      721 gcggacagtg atcggcttct ctacgtaccc gttgaagccg gcatccaagg cccgttcccg
      781 atcctgcttc atcgcctggg cggttaccgc gaccacgggt atgtccgctg tccgcgggct
      841 ctcgcgcagc cggcgaagag cctccatgcc atcgataccg ggcagctgga gatccatgag
      901 aacgagatcg ggaggctcgc tgaccgccaa ggtgatgccg tcctcggccg tccgagccac
      961 ccgcacgtcg tagcctgcgt actcaagcac gtcccgtagc agcttgagat tccgctcgtt
     1021 gtcctccacg accaggatca cgtaggtcat cccggctccg gagctgggga ctggcgattt
     1081 gtgctcgccc agcgaagcag tcccgcgagg ccggacagat cgaactccgt cttgcgcgcc
     1141 acatacgtga ttcgcccctg cagtcgctcc ttgtcctgct gggtcattga cttggacgtc
     1201 aggatgacca cggggacgga tttcgtggcg gggtctgctc gtagagcctc cacgacttcg
     1261 aagccatcca tgccgggcat gagcaggtcc agcagaacgg cggagggttg ctgttcccgg
     1321 atcagtgcca gcccctcctg gcccgtggct gcgcccagca ccgtccatcc ctcgggctcg
     1381 agacttgccc ggaccagctc tatggcaaga ggatcgtcgt caattgccac aaccgtgtgc
     1441 ttctgctcag gcattgccgc tgcgcggtag acggcggcca gcagctgatc cttgcccacg
     1501 ggcttgacga ggtattcggc ggcgcccagc gcagaaccgc ggccacgctc atcaagcatc
     1561 gacactacga tcaccggtat cgctgccgtc cgcgggtctg ccttgagctg ggcgagaacc
     1621 tcccagccgt caattcccgg cagaaggatg tcgaggataa cgcctgcggg actcagccgg
     1681 cgcactgtat ccaggccctc ttcgccgtct ctggcgctga cgacgcgggc gcccgccgcc
     1741 tcaagataga cccgcagcag atcgaaggag cgccggtcgt cttccacgac aacgacggta
     1801 ggcccagggc ccggggccaa ctctgcgggg atacctgagt ccaggccgac ctgcgggatt
     1861 gacgtccacg ccggttcccc ggatctggcc ggcagcgcga aaccgaacgt gctgcccttc
     1921 ccagcttcac tttcgaccca gatcctgccc ccatgcagct caaggatccg tttggacaga
     1981 gtgagcccga gcccggtgcc ctcggtctgc ccgggaagcc gggcgccttg ctggaaagag
     2041 tcgaagatgc gctggcggtc ctcggccggc acacccggtc cggtgtcggt caccgtcacg
     2101 acgaggtcct ggtcgcgtat ggcggcgcgg acctgtacgc gcccgtcgtc aggggtgaac
     2161 ttcaccgcgt tggacagcag gttcagcact acttgcctga agcgcaggcg atcggcgttc
     2221 accaggccaa cctcgggatc ggcctcaagg ctgagcagga ttctttgctt gatcgctcgc
     2281 tcacgtacca gcgagaggca atactccagg gattcgccga cgccgaattc ggagcggttc
     2341 aggaccatct gaccagcttc gatcttcgac agatccagga tgtcgttcag tagttcgagc
     2401 aagtgcttgc cagagctcca gatgtcgcgc aggtagtcgt c
//
LOCUS       DASRPQ010001908         4340 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_847504, whole genome shotgun sequence.
ACCESSION   DASRPQ010001908 DASRPQ010000000
VERSION     DASRPQ010001908.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4340
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_847504"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1590)
                     /locus_tag="VFD73_21660"
     CDS             complement(<1..1590)
                     /locus_tag="VFD73_21660"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HZI76579.1"
                     /translation="MRINVQRLLDRYTRILWVGGLVLLVGVLAVDTRWLSHPISTALL
                     MATIFLLRAVPVRLSKYSYLTQSAVPTLVGAVCIGPAPVAAALWVGVAAADVFGLRKP
                     PRAGVINAGREVIGFIAAYGPYAAILSLGEASELTLDFLPAAAILVSLYFFLSRALFY
                     FSLLIRNKLESAEKILILRWEISSYLLTLIASTIVVTALATLAPVGWVAVAMALSVLG
                     LLTRKILDEAIGAEDLNKVHLMETAIASNATLQGSFTQIERLAYRLLDWGDFRVYQVS
                     GSNPTLVYRSSVGRPNRTDPPAALAPLRREVLEIGEPLVIRDIRNDPRLADAFEDVLT
                     LVIHPIRFGDEILGLLEVEHHKRHAYGSKDMLALSTLSGQMATAIHIAELRRPLVLTV
                     GQIGEQVTSLARVADSLRTSATALADVSLGMRQGAMELEKFATGGLRATGSLATATQE
                     MMSKGAQAAAASGTAAEVAARNRDVIGDAIARLVELKGFVAAGADRVAALGGLTQRIT
                     GFIGTIREIADLTNLIALNAAI"
     gene            complement(1587..2390)
                     /gene="trpA"
                     /locus_tag="VFD73_21665"
     CDS             complement(1587..2390)
                     /gene="trpA"
                     /locus_tag="VFD73_21665"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HZI76580.1"
                     /translation="MAITSSDSSLEQAWFALRAGGRQALIPYLTAGYPSPEASLEALQ
                     AAAEVSDMLEVGVPFSDPLADGPTIQRSTFEALRHGMTLPRTLDLIARADLSRPVIIF
                     SYLNPILRYGVERFLADAAALHIAGLILTDLPAGGDAGVESAVQQSQLDLIRLVAPTT
                     SPERLSRAVEGAQGFVYLVARLGVTGATSTLSAGLDRLIGMVRRATPLPVAVGFGIST
                     PEQAGAVARMADGVVVGSALVDVLGAGGVAEAGKFLLSLRRAIDAEDRS"
     gene            complement(2371..3825)
                     /locus_tag="VFD73_21670"
     CDS             complement(2371..3825)
                     /locus_tag="VFD73_21670"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HD-GYP domain-containing protein"
                     /protein_id="HZI76581.1"
                     /translation="MSSPLELVSDAPGDDGQLRQGGRSLLLALYTALRSLKLYPLENA
                     TVQKSLSDLDSVTRSLLQTEIELEIRLAGDFIFVNSTRLRLELDNYASFSHVLAVFRG
                     FEIGALRVRSGTERREWQIFLSLLLSLTSLETADERHRQLQERLDAGKVTNLELERGL
                     PDGGSSAEAREASKQVYAQSVAVTKDVIAGVRLGRATGLKRVKRAVQMVVDQVLNNEI
                     SMVGLTTLREYDEYTFTHSVNVCIFSVALGKKLGFSKVQLCDLGMAALLHDVGKARVP
                     PEVLNKPGKLDEHEWRLIQAHPWYGALTLFSMRGYEEIPYHSILVAHEHHMKVDLTGY
                     PKVIRPRKLGIYSRIVSVADGFDAATTRRVYQTVAIEPDQVLREMWENPNRGYDRVLV
                     KALINLIGVYPVGTCVILDTFEVGVVAAPNPDGEHLRRPLVRIAVDADGGPVPAPGTQ
                     VSLSEKDESGAYRRSIVKVTNPSRYGITVGDYFV"
     gene            complement(3822..>4340)
                     /locus_tag="VFD73_21675"
     CDS             complement(3822..>4340)
                     /locus_tag="VFD73_21675"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HZI76582.1"
                     /translation="GRLELHQAIPGLAQAMAHSDPAIRLAIVQTLGQLGTPGALNVVD
                     KAIEDPDRGVRLAAVRAAGARGYKGALRRVESVVFGKALKDMDLTEKMAFFEAYSAIA
                     GVNAVKPLSAILLDRGLLRMKEPAEVRACAATALGRLKTAEAREVLQRAAEDKDLVVR
                     NAVSRALREAAK"
BASE COUNT          800 a         1416 c         1374 g          750 t
ORIGIN      
        1 gatcgcggca ttcagcgcga tcaggttggt caaatccgcg atctcgcgga tggttccaat
       61 gaagccggtg atccgctgcg tgaggccgcc cagcgccgcc acccggtcgg ctcctgcggc
      121 gacaaagcct ttgagctcga ccagccgggc gatcgcatca ccgatgacgt cgcggttgcg
      181 cgccgcgacc tctgctgcgg ttccgctggc ggcagcggct tgagcgccct tgctcatcat
      241 ctcctgggta gcggttgcca gcgatccggt tgcgcgcaaa ccgccggtgg cgaacttctc
      301 cagctccatg gcgccctgcc gcattcccag agagacatcg gccaacgccg tcgcggaggt
      361 ccgcagcgaa tcggccaccc gcgcgagcga ggtcacctgc tcgccgatct gacccacggt
      421 caataccaga ggccgccgca gctccgcgat gtgaatagcg gtggccatct ggcccgaaag
      481 cgtgctgagc gcgagcatgt ccttggagcc gtacgcatga cgcttgtgat gttctacctc
      541 gagcagtccc aagatctcgt cgccgaagcg gatcggatgg atcaccaggg tgagcacatc
      601 ttcgaatgca tcggccagtc ggggatcgtt gcggatgtct ctgatgacca gcggctcgcc
      661 gatctccagc acttcgcgcc ggagcggcgc cagggcagcc ggcggatcag tccggttggg
      721 acgtcccacg gagctccggt agaccagggt tgggttactc cccgacacct gatacacccg
      781 gaagtcgccc caatcgagca gccggtatgc cagccgctcg atttgcgtga acgacccctg
      841 cagcgtcgcg ttgctcgcga tcgcggtttc catcaagtgc accttgttga gatcttccgc
      901 cccgattgct tcgtccagaa tcttgcgagt caagagcccc agcacgctga gcgccatcgc
      961 cacggccacc catccgaccg gagcgagcgt cgcgagtgcc gtgaccacga tggtggaggc
     1021 gatcagggtt agcaggtagg agctgatttc ccagcggagg atgagaatct tctccgcgct
     1081 ctcgagctta ttgcggatca gcaggctgaa gtagaacagc gcacggctga gaaagaagta
     1141 cagcgagacc aggatggcag ccgcgggcag gaagtcgaga gtgagctcgg aggcctcgcc
     1201 gagagacagg attgccgcat atggtccgta tgccgctata aagccgatga cctctcggcc
     1261 ggcgttgatg acgccggcgc gcggaggctt acgcagcccg aacacgtccg ccgcagccac
     1321 gccaacccag agcgcagctg cgacgggggc cggtccgatg cagacggcac ccaccagagt
     1381 cggcaccgcc gactgcgtca ggtaggagta cttgctcagt cgtactggaa cggctcgcag
     1441 caggaaaatg gtggccataa gcagcgccgt ggagatggga tgggagagcc atcgggtatc
     1501 caccgccagc actccaacca gtagtaccag gccccctacc cagaggatgc gggtataccg
     1561 gtcgagcagt cgctgcacgt tgatcctcac gagcgatcct ccgcgtctat tgcccgacga
     1621 agcgagagca ggaacttgcc ggcctcagcc acgccgccgg ctccaaggac atcgaccagc
     1681 gcactcccca ccacgacacc gtctgccatg cgagctactg cccccgcctg ctcgggggtg
     1741 gagattccaa aaccaaccgc caccggcagg ggagtggcgc gtcggaccat gccgatcaac
     1801 ctgtccagcc cggcagacag cgtggacgtg gcgcctgtca cccccagccg cgcgaccagg
     1861 tagacaaagc cttgggcgcc ttccacggct cgtgacagac gctccgggct ggtggtcggt
     1921 gcgaccagtc ggatgaggtc cagctgactc tgctgcaccg ccgattccac gccggcgtcg
     1981 cctccggccg ggagatcggt caggatcagc ccggcgatgt gcagtgcggc ggcatcagcc
     2041 aggaagcgct cgaccccgta ccgcagaatg ggattgagat agctgaagat gatcaccggc
     2101 cgagacaggt ccgctcgcgc aatcagatcg agagtgcgcg ggagcgtcat tccatggcgc
     2161 agcgcctcga aggtggaacg ctggatagtc ggtccgtccg cgagcggatc gctgaacggc
     2221 acgccgacct ccagcatgtc cgacacttcg gcggcagcct gaagcgcctc gaggctggcc
     2281 tccggggacg gataccccgc cgtgagatat gggatcagcg cctgccgtcc accggcacgc
     2341 agagcaaacc aggcctgttc cagagaggaa tcagacgaag taatcgccaa ccgtgatccc
     2401 atatcgtgag gggttggtaa ctttgacgat ggagcgccgg tacgctccgc tctcatcttt
     2461 ctcactgagg ctgacctggg tcccgggggc tgggaccgga ccgccgtcag catccacggc
     2521 aatgcggacc agagggcgcc tgaggtgttc cccgtcaggg ttcggtgcgg cgaccacgcc
     2581 cacctcgaag gtgtccagaa tgacgcaggt tccgactgga tacaccccga tgagattgat
     2641 cagtgccttc accagcactc ggtcgtagcc ccggttcggg ttctcccaca tctcgcgcaa
     2701 cacctggtcc ggctcgatgg ccaccgtctg gtacacccgg cgggtggtgg cggcgtcgaa
     2761 gccgtctgcc accgagacga tccgagagta gatcccgagc ttgcggggcc ggatgacctt
     2821 ggggtagccc gtaagatcga ctttcatgtg atgctcatgt gcaaccagga tcgaatggta
     2881 cggaatctct tcgtatcccc gcatgctgaa gagcgtaaga gcgccgtacc agggatgagc
     2941 ctggatcaga cgccattcgt gttcatccaa cttgccaggc ttgttcagca cctccggcgg
     3001 gacccgggcc tttccgacgt cgtgtaacaa cgccgccatg ccgagatcgc agagctgcac
     3061 cttcgaaaag ccgagtttct tgcccagggc gacggaaaag atgcagacgt tcacggagtg
     3121 agtgaacgtg tactcgtcgt actcccggag ggtggtcaga cccaccatgg agatctcgtt
     3181 attcagcacc tgatcgacca ccatctgcac cgcgcgcttt acccgcttga ggccggtggc
     3241 gcggcccagg cgcactccgg cgatcacgtc cttcgtcacg gccacgctct gcgcgtagac
     3301 ctgcttcgat gcctcgcgtg cctcggccga gcttccgccg tcgggcagcc ctcgttccag
     3361 ctcgaggttg gtgacctttc cggcatccag ccgttcctgt agctgccggt gtcgctcgtc
     3421 ggccgtctcc agcgaggtca gactgagcag aaggctcagg aagatctgcc actcacgccg
     3481 ctcagttccc gagcggacgc ggagcgcgcc gatctcgaag cctcgaaaga ctgccaggac
     3541 gtggctgaag gaggcgtagt tgtcgagctc cagccggagc cgcgtggaat tgacgaagat
     3601 gaagtcgccg gcgagccgaa tttccaactc gatctcggtt tggagcagcg aacgggtgac
     3661 gctgtcgaga tcggacagcg atttctggac ggtcgcattc tccaggggat acagcttgag
     3721 actccgtagc gcggtataca acgccagcag cagcgagcgt cctccctggc gcagctggcc
     3781 atcgtccccc ggcgcatcag agacgagctc cagtggagag ctcacttggc agcctctcgg
     3841 agcgcccggc tcacggcgtt acggaccacg aggtctttat cttcggccgc ccgttgcagg
     3901 acctctctgg cttccgctgt cttgagccgt cccagagccg tggcggcgca ggcgcgaact
     3961 tcggccggct ctttcattcg gagcaagccg cgatcgagca ggatggcgga gagcggcttc
     4021 accgcattga cgccggcaat tgcgctgtac gcctcgaaga acgccatctt ctcggtgaga
     4081 tccatgtcct tcaatgcttt tccgaagacg acgctctcga cccggcgcag cgcgcccttg
     4141 tacccgcggg ctccggccgc gcgaacggcg gcgagtctga ctcctcgatc ggggtcttcg
     4201 atagccttgt ccaccacgtt cagcgctccc ggcgtcccca gctgccccag cgtctggacg
     4261 atggccaatc ggatggcggg atcgctgtgg gccatggctt gagccaggcc ggggattgcc
     4321 tgatgcaatt cgaggcgacc
//
LOCUS       DASRPQ010001909         4706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_847638, whole genome shotgun sequence.
ACCESSION   DASRPQ010001909 DASRPQ010000000
VERSION     DASRPQ010001909.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4706
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_847638"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            112..1332
                     /locus_tag="VFD73_21680"
     CDS             112..1332
                     /locus_tag="VFD73_21680"
                     /inference="COORDINATES: protein motif:HMM:NF017743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76583.1"
                     /translation="MSAVRILRIATGGDGVGKQSDGKTIFIPRTAPGDLVEASEVRSH
                     QRFSRGRLLQILEPSPHRVEPRCPHYVRDNCGGCQLQHLDTKTQLASRQTFVGDALRR
                     IAKRALPDPPIVPAEKPYDYRTKLTLHAHSGGRRIGLHPYYSAEDIFDLEWCHITVPE
                     LMKLWQVIRSLRSLLPATLEQLVLRLDRQGGRHLVVRVGEGEAWSGGPRLAREVQRRG
                     ESVSLWYQPPDGAARVVAGGPEAFPATVFEQVHPEMGDRVRQFAIDRLGPVRGKKVWD
                     LYAGIGETTAQLAALGAEVESVEVDRRAVAEAEARGPRARRHTGRVEDLLRELRAPDL
                     VIANPPRGGMEEAVTAELAGMNPERLVYISCDPATLARDLQRLPRLRVSEMQAFDLFP
                     QTAHVETVVVLEPA"
     gene            1329..1841
                     /locus_tag="VFD73_21685"
     CDS             1329..1841
                     /locus_tag="VFD73_21685"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HZI76584.1"
                     /translation="MKYVVTIEGESIEVEVDGDRLTIGGQSYHASLQQVPGSRVRHFL
                     LDNRPTTLELERLSSGRWALTVAGERTEVEVLDERTRQIRTLTGTRQARHSTEVLKAP
                     MPGMVVRVQAQVGESVSAGAGLVVLEAMKMENELKAAADGRVKMIRVSPGEAVEKGQV
                     LIEFENDGGR"
     gene            1948..2400
                     /gene="rplM"
                     /locus_tag="VFD73_21690"
     CDS             1948..2400
                     /gene="rplM"
                     /locus_tag="VFD73_21690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HZI76585.1"
                     /translation="MKTFTATPADISHDWHLIDAEGVPLGRLASVVAQLIRGKHKPTY
                     TPHMDGGDFVVVVNAAKVRLTGRKLTNKVYFGHTGYMGHERFTAARDLLAKHPERVIE
                     KAVYGMLPKTSLAKQKLRGKLKVYAGAEHPHAAQQPKSFSVTPSKATA"
     gene            2397..2798
                     /gene="rpsI"
                     /locus_tag="VFD73_21695"
     CDS             2397..2798
                     /gene="rpsI"
                     /locus_tag="VFD73_21695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HZI76586.1"
                     /translation="MTATPQFRWQAVGRRKTSVARVYLTPGTGKWDINGRTLGDYFPR
                     PSLVQHIQQSFTATDTLGAFDVKAHVSGGGQAGQAGALRHAIARALVEADGQHRTKLR
                     AAGLMTRDPRAVERKKPGRPGARKRFQFSKR"
     gene            2983..3882
                     /gene="rpsB"
                     /locus_tag="VFD73_21700"
     CDS             2983..3882
                     /gene="rpsB"
                     /locus_tag="VFD73_21700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HZI76587.1"
                     /translation="MAQPQLQDLLEAGVHFGHQTRRWNPKMRRFIFAERSGIYIIDLQ
                     KTLRQIAKAQELLRSVVLKGDGVLFVCTKKQLKAIVQAEAQNCGAFYVTERWLGGMLT
                     NFQTLKKQIRRLRELEQGAAEGEFENYTKKEKLLFERERVKLSRNLEGIKGMGRLPGA
                     LFVVDAKKEKIAVAEANKLGIPVVAIVDTNADPDVITVPVPGNDDAIRSVSLITAALS
                     DVIKESRSQMPMREVTEDLEAETYSTDAGSEGDADADRKRRRPRRKRRPKPEAIAARL
                     KTDADAEGLAEPAAPSVASDTGA"
     gene            3979..4584
                     /gene="tsf"
                     /locus_tag="VFD73_21705"
     CDS             3979..4584
                     /gene="tsf"
                     /locus_tag="VFD73_21705"
                     /inference="COORDINATES: protein motif:HMM:NF013085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HZI76588.1"
                     /translation="MASTTVSPKNVSDLRARTGAGMMDCKRALEESGGDMEKASEILR
                     KKGIAKAEKRSGKTASQGLVVSYIHHNHQVGVLLELNCETDFVARTTDFSHLAREIAL
                     HIASADPIGVNSEDVPAELVERERRIAEEQAAKEGKPENIRGKIVDGKIKKFVAERTL
                     LEQPFVRDDKKTVGQLIKEASGKLGETISVRRFARFAVGEA"
BASE COUNT          919 a         1417 c         1582 g          788 t
ORIGIN      
        1 cgctgctgcg ctggcggagg atgaagctcg gcagagtcgc cggccggtgc tgacgactga
       61 cgccgctcag agcgacaact ggagccggct ggcgcggact gaagcgctcc ggtgagcgct
      121 gtccgcattc ttcgtatcgc cactgggggc gacggggttg gaaagcagtc ggacgggaaa
      181 accatcttca ttccgaggac tgcgcccgga gatctcgtcg aagccagcga agtcaggtct
      241 caccagcggt tcagccgagg tcgactcctc cagatcctag aaccatctcc acaccgggtt
      301 gagcctcgct gcccgcacta cgtacgcgat aattgcggtg gctgtcagct gcagcacctg
      361 gataccaaga cccagttggc gagccggcaa acgttcgtag gcgacgcgct tcggcgtatc
      421 gccaaacgtg cgcttcccga tccgcctatc gttccggcgg agaaacccta tgactaccgc
      481 accaagctca ctctccacgc ccacagcggc ggccggcgca tcggtcttca cccgtattac
      541 agcgcggagg acatcttcga cctcgagtgg tgccatatca ccgtgccgga gttgatgaag
      601 ctctggcagg tgatccgaag cctccgctcg ttgctgcctg ctacgcttga gcagctcgtg
      661 ctgcgattgg atcgccaagg gggtaggcat ctggtggtcc gagtcggcga gggcgaggcc
      721 tggtccggcg ggcctcggct cgcgcgggag gtgcaacgcc ggggcgaatc ggtctccttg
      781 tggtaccaac caccggatgg ggcggcccgg gtggttgccg gaggcccgga agcgtttccg
      841 gcgaccgtgt tcgagcaggt ccatcccgag atgggcgacc gggtgcggca attcgccatc
      901 gatagactgg gcccggtaag aggcaagaaa gtttgggacc tgtatgccgg catcggcgag
      961 accaccgccc agctcgccgc tttgggtgca gaggtggaga gcgtggaagt ggatcggcgc
     1021 gcggtggccg aggccgaagc tcgcgggccg cgtgcccgtc ggcacaccgg tcgagtggaa
     1081 gacctgctgc gagagctgcg ggcgccggat ctcgtcatcg ccaaccctcc gcgcgggggt
     1141 atggaggaag cggtaaccgc cgagctggcc gggatgaacc cggagcggct ggtgtatatc
     1201 tcctgtgacc ccgcgacact ggcccgggat cttcaacggc tgccacgcct acgggtcagc
     1261 gagatgcagg cgtttgacct gttccctcaa acagcccacg tcgaaaccgt tgtggtgctg
     1321 gagcccgcgt gaagtacgtc gtgaccatcg aaggagagtc catcgaggtc gaggttgatg
     1381 gagatcgcct gaccattggc gggcaatcgt atcacgctag cctgcagcag gtgcccggat
     1441 cccgggttcg acactttctc ctggataatc ggcccaccac cctcgagctc gagcggctgt
     1501 cctctggccg gtgggctctg actgttgcag gcgaacgcac cgaggtcgaa gtgctggacg
     1561 agcgcacccg tcagatccga acgctcaccg gcactcgcca ggcgcgccat tccaccgagg
     1621 tgctcaaagc cccaatgccc ggcatggtcg tccgggttca agcccaggtg ggcgagagcg
     1681 tgtccgccgg tgccgggttg gtggtactgg aagcaatgaa gatggaaaac gagctgaagg
     1741 cggcggcgga cggaagggta aagatgattc gggtgagtcc cggggaggcg gtggaaaagg
     1801 ggcaggtttt gatcgagttc gaaaatgacg gtggacggta ggacggtggt ttccgctctc
     1861 gggttccact tgacccgatc acagccggcc cgctatcttc ggggtctgtc ttggtttgga
     1921 cctctttagc tcacggctct ggagtcgatg aaaaccttta ccgctacgcc ggcggatatc
     1981 agtcacgatt ggcacctgat cgatgccgag ggtgtgcccc tcggccgtct ggcaagcgtt
     2041 gttgcccaac taatccgggg caagcacaag ccgacgtaca cgccccacat ggatggtggt
     2101 gatttcgtcg tggtggtcaa cgcggccaag gtgcggctca ccggacgaaa gctgaccaac
     2161 aaagtctact tcggccacac cggctacatg gggcatgagc ggtttaccgc cgcgcgcgac
     2221 ctcctggcca agcatcccga gcgggtgatc gagaaagccg tctatggcat gctgccgaag
     2281 acctcgctcg ccaaacagaa gctccggggc aaactcaagg tgtacgctgg tgccgagcat
     2341 ccgcatgcag cccagcagcc caagtcattc tcggtaactc cctcgaaggc gactgcatga
     2401 cggccacacc tcaatttcgg tggcaggcgg taggacggcg caagaccagt gtggcccggg
     2461 tgtacctcac gccgggcacc ggcaagtggg acatcaacgg ccgcactctc ggtgattact
     2521 tcccgcgtcc ctccctggtt cagcacattc agcagtcgtt cactgcaacc gacactctcg
     2581 gtgcctttga tgtgaaggcc catgtgagcg gcggaggcca ggcgggacag gccggcgctc
     2641 tccggcacgc catcgcccgg gctctggtcg aggccgatgg gcagcatcgg acaaaactca
     2701 gggctgccgg tctcatgacg cgggacccga gagcggtaga gcggaagaag ccgggacgcc
     2761 caggcgcccg gaagcggttc cagtttagta aacggtagga caggcggagt ggcggactgg
     2821 cggacggatc ttttccagta aatccgaccg actgaccgtc cgaccggccg tccgaccgat
     2881 cacgcacacc gccggattcg gccctgggtg cccctctggg tgagggccga agatgaacgc
     2941 ggtggacgcc taaccccaac acggatggga agtcagtcaa gcatggcaca gcctcaactg
     3001 caggatctcc tcgaagccgg agttcatttc ggccaccaga cccgccgatg gaacccgaag
     3061 atgcgacggt tcatcttcgc cgagcggtct ggcatctaca tcatcgacct ccagaagacc
     3121 ctgcggcaga ttgccaaggc ccaggagctg ttgcgaagcg tggtgctcaa gggcgacggg
     3181 gttctgttcg tctgcaccaa gaagcagctc aaggcgatcg tgcaggccga ggcgcagaac
     3241 tgcggcgcct tctacgtgac ggagcgctgg ctcggcggca tgttgacgaa ctttcagacg
     3301 ctcaagaagc agatccgccg gcttcgcgag ctggagcagg gagcggccga aggggagttc
     3361 gagaactata ccaagaagga aaagctgctc ttcgagcgcg agcgggtgaa gctgagccgg
     3421 aacctggagg gcatcaaggg aatgggacgc cttccgggtg cactctttgt ggtcgatgcc
     3481 aagaaggaaa agatcgccgt ggccgaggcc aacaagctgg gtatcccggt ggttgccatc
     3541 gtcgacacca atgccgatcc cgacgtgatc accgttccgg tgccggggaa cgacgacgcc
     3601 atccgatcgg tttccctgat tacggctgcg ctctctgatg tcatcaagga gtcgcggtcg
     3661 cagatgccga tgcgcgaggt gacggaggat ctggaggcgg agacctacag caccgacgcg
     3721 ggcagcgaag gcgatgccga tgccgaccga aagcgtcgcc ggccacgccg gaagcgccgg
     3781 cccaagccgg aggctatcgc ggcccggctc aagaccgatg ccgacgcgga ggggctcgcc
     3841 gagccggcgg ctcccagcgt ggcgagcgat acgggcgcct aagcggcggt tatcccggtc
     3901 gcaactccgc cgctctaggc ctcgccgcca cgagcggcgg ctttactatt cacccctgag
     3961 tgagctggtt gggagactat ggcaagcacg acagtttcgc cgaaaaatgt gagtgacctt
     4021 cgggcccgca ccggcgccgg catgatggac tgcaagcgcg cgctggagga gtccggcggc
     4081 gatatggaaa aggcctcgga gatcctccgg aagaagggga ttgccaaggc ggagaagcgc
     4141 tccggcaaga ccgcctcgca ggggctggtc gtgagctaca tccatcacaa ccatcaggtt
     4201 ggggtactcc tggagctcaa ctgcgagacc gacttcgtgg ctcggaccac cgacttcagt
     4261 catctcgctc gggagatcgc gctccacatc gccagcgccg atccgatcgg agtgaattcg
     4321 gaagatgttc ccgccgagct ggtcgagcgg gagcgccgga ttgcggagga acaggccgcc
     4381 aaggaaggca agccggaaaa cattcgcggc aagattgtgg acggcaagat caagaagttc
     4441 gttgccgagc gaacgctgct ggagcagccg ttcgttcgtg atgacaagaa gaccgttgga
     4501 cagctgatca aggaggcgtc tggcaagctg ggcgagacca tctcggtccg gcggttcgcc
     4561 cggttcgcag tcggagaagc ctaatggccc tcgcctacag ccgcgccctg ctcaaaattt
     4621 cgggcgaggc gctggccggc gataagggct ttggactcga ctaccacatg gtcgaggcgt
     4681 ttgcagagga gatcaagtcg gtgcac
//
LOCUS       DASRPQ010001910         1405 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_531251, whole genome shotgun sequence.
ACCESSION   DASRPQ010001910 DASRPQ010000000
VERSION     DASRPQ010001910.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1405
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_531251"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..464)
                     /locus_tag="VFD73_21710"
     CDS             complement(<1..464)
                     /locus_tag="VFD73_21710"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI76589.1"
                     /translation="MAEAMQCYEAAIEAATRDGERGALAEAIRRLGVVHHHRDQPALA
                     RELCQKSYDTALEIQDAVLGAEALNALAGFDFESGQIEAARERFYRALELGGASAELR
                     GRTEQNLGILANIQGRLAEALAHYQRSLAAFESSGDERGCAIAYHNLGMVSA"
     gene            complement(579..1175)
                     /locus_tag="VFD73_21715"
     CDS             complement(579..1175)
                     /locus_tag="VFD73_21715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76590.1"
                     /translation="MSVLRRFSSVGLVLLLLAGVSCTTGDTTLTEAPVAGDQQAAPSF
                     GLIGDLTGGLTSTVDGLTTTVVGTLGSVTDLLLCSRQPYASDTETIGPNGGTLRVGSH
                     TLVIPNGALSSKVTITGEQISGSVNSVRFSPEGLHFDKPAQLTMSYENCALVLVQKKI
                     VYTDEKLKILEVLGSLDLFKKKTVSAPIDHFSRYAVAY"
BASE COUNT          247 a          458 c          445 g          255 t
ORIGIN      
        1 tcggcgctca ccattccgag gttgtggtac gcgatggcgc agccccgctc atctccactg
       61 ctctcgaatg ccgcaagtga gcgctggtaa tgcgccagcg cctcggcgag ccgtccctgg
      121 atgttggcca ggatgcccag attctgttcg gtccggcctc gcagctccgc gctggcgcca
      181 cccagctcca acgcgcggta gaaccgctcc cgggctgcct cgatctgtcc cgactcgaag
      241 tcgaatccgg cgagagcatt cagcgcctct gccccgagga ccgcgtcctg aatctccaaa
      301 gcggtgtcat agctcttctg gcacagctcg cgggccagcg ccggctgatc ccgatggtgg
      361 tggaccacgc caagacgccg tatcgcttcg gccagcgcgc cgcgttcgcc gtcgcgggtg
      421 gccgcctcga tcgccgcctc atagcactgc atcgcttccg ccatcgagcc ggcgcgctcg
      481 tggccccgag ccgttcgtat aaagtcagcc gcgcgggaac cctcggcttg ccgggggccc
      541 cgcgcgtctg agtgcttcga ctgatctgag gtcaccgctc agtacgccac ggcgtagcgg
      601 gagaagtggt cgatgggcgc gctgacggtc ttcttcttga acaagtcgag cgagccgagg
      661 acctcgagga tcttcagctt ctcgtcggta tacacgatct tcttctgaac caacaccagg
      721 gcgcagttct cgtagctcat ggtgagctgc gccggcttat cgaagtgcaa gccttcgggg
      781 ctgaagcgca cagagttcac cgacccgctg atctgctcgc cagtgatggt gactttgctg
      841 gagagcgctc cgttgggaat caccagcgtg tgggatccga ctcggagggt accgccgttc
      901 ggtccaatgg tctcggtgtc gctggcatac ggctgccgtg agcacagcag gagatcggtc
      961 accgagccca gagtccccac gacagtcgtg gtgagcccgt cgacggtgct ggtgagcccg
     1021 ccggtgagat caccgatcag gccgaacgac ggtgcagcct gctgatcacc agcaacgggt
     1081 gcttcggtca gcgtcgtgtc gcctgtggtg cagctcacgc cagccaggag cagcaggacc
     1141 aaaccaaccg atgaaaatct gcgaagcaca ctcatggagc tactccgggt agaggtgagc
     1201 gtcgtgcgac gataccgcga ccgccaacgc ggccgccgaa ctcgcccgag ttgctcgccg
     1261 actgaagccg gcttgacaat cccaggttcg ttcggtacgc ggaacttgaa gtcaggcagc
     1321 gccttagcag gcaaagatta tgcccccctg cactgggggg cgtcagaaaa tggacgacca
     1381 gattgtagtc agtggggacc cgtcg
//
LOCUS       DASRPQ010001911         1123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2765260, whole genome shotgun sequence.
ACCESSION   DASRPQ010001911 DASRPQ010000000
VERSION     DASRPQ010001911.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2765260"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            37..453
                     /locus_tag="VFD73_21720"
     CDS             37..453
                     /locus_tag="VFD73_21720"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HZI76591.1"
                     /translation="MEDTDALICLFRDYLASIPPQLNYILPEDLAAAMAEDRDRYFIL
                     DNRTPEAYAEAHIPGAVNIWMKDLMSPGQLARLPRDRPIVVCCWVGHTASQLLPMLSA
                     LGFDAIGLKYGMGIPKSVSESKSGWAELGLPMETGA"
     gene            complement(535..>1123)
                     /locus_tag="VFD73_21725"
     CDS             complement(535..>1123)
                     /locus_tag="VFD73_21725"
                     /inference="COORDINATES: protein motif:HMM:NF012788.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76592.1"
                     /translation="GTKFGKTEKGAVWISADRTSPYTLYQFLINLSDDEARHFALFFS
                     LEDRAAIEAMFARHADKPSSRVIQRHVAREITALLHGQQAASRAVQASEALFAGDVHT
                     IDADMLGEMSDVPAVDLPLNLLDDAGMSATDLLIAVELASSKRDAREHVGNAAVQVNG
                     HKADSTTMVTRDDLLHGSVIFVRRGKREWRLARFE"
BASE COUNT          212 a          351 c          341 g          219 t
ORIGIN      
        1 ctctgaacag gattaggctc gatactggag agcaatttgg aagacaccga cgcgctcatc
       61 tgtctgttcc gtgactacct tgcttccatt cctccgcagc tgaactatat ccttcccgag
      121 gacctcgccg cggcgatggc agaggatagg gataggtact tcatcctgga taacagaacg
      181 ccagaggcct acgcggaggc acatattccc ggcgcggtta atatctggat gaaagatctc
      241 atgtcccccg gccagctggc ccggcttcct cgggacaggc cgatcgtcgt gtgctgctgg
      301 gtaggtcaca ccgccagcca gctgctcccc atgctctctg ctctcggctt tgatgcgatc
      361 gggctgaagt acgggatggg cattcccaag tcggtttcgg aaagcaagtc cgggtgggcg
      421 gagctgggcc tgccaatgga aacgggcgcc tgactaaggt ccccggcggc ctccgtgcgc
      481 ttgtactcgc tggtgaccct ttccgccggc cagagaagcc gctgcctcca tgactcactc
      541 gaaacgcgca agcctccact cgcgctttcc gcgacggacg aagataaccg agccgtgcag
      601 aaggtcatcc ctcgtaacca tcgtcgtgga gtcggccttg tgcccgttaa cctgcaccgc
      661 ggcgttaccg acatgctcgc gggcatcgcg cttgctggac gcgagttcta ccgcgatgag
      721 caagtcagtg gcgctcatcc cggcatcatc gagcaggttc agcggaagat ccacggcagg
      781 aacgtctgac atctcaccga gcatgtcggc atcgatggtg tgcacgtcac cggcgaagag
      841 tgcctccgac gcctgcacgg ccctgctggc ggcctgctgg ccgtgcagaa gtgccgtgat
      901 ctcccgcgcc acgtgacgct ggatcaccct gctggacggc ttgtcagcgt ggcgggcaaa
      961 catcgcctcg atggcagccc ggtcctcgag ggagaagaac agcgcaaaat ggcgcgcctc
     1021 atcatcgctg aggttgatca ggaactggta gagcgtatac ggagaggtgc ggtccgcaga
     1081 gatccacacc gcaccttttt cggtcttgcc gaacttggtg ccg
//
LOCUS       DASRPQ010001912         1926 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3391451, whole genome shotgun sequence.
ACCESSION   DASRPQ010001912 DASRPQ010000000
VERSION     DASRPQ010001912.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1926
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3391451"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..728
                     /locus_tag="VFD73_21730"
     CDS             <1..728
                     /locus_tag="VFD73_21730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HZI76593.1"
                     /translation="GLDLTQLQDAFKSGVRTFLFSNPNNPTGVVYSPQEIAAIAELAN
                     RYGVTVIADELYARLLYSDQTYTHICAAGLAPDQVVTILGPSKTESLSGYRLGVAFGA
                     THLIERAEKLQAIVSLRAPGYSQAVLSTWFDEPEGWLAERTARHQAIRDDLIAVLRTV
                     PDLSVRMTEAGSYLFPRLPALALGLHDFVRAVRLQANAVVTPGTEFSPDATDSIRLNF
                     SQNHQAAVQAAQRIAELIERYRE"
     gene            770..1093
                     /locus_tag="VFD73_21735"
     CDS             770..1093
                     /locus_tag="VFD73_21735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76594.1"
                     /translation="MKSLRRLAPSLGLAGLLAACGSTETNEGCLFANLVDITAPNVMS
                     VGDTVTFQASLVPGGCLPAGLEPGDWRWSSSDTLISRIDSLTGLAQGIGGGTATILVQ
                     HSRAP"
     gene            1177..1701
                     /locus_tag="VFD73_21740"
     CDS             1177..1701
                     /locus_tag="VFD73_21740"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HZI76595.1"
                     /translation="MKASVFIATSLDGFIARKDGALDWLPHDGGEPHGYDEFIATVDA
                     IVIGRHTFETVLAFEVWPYGTKPVIVLTSTPSAWTAPAGAVCDFMTGSPAEICDRLRP
                     RGLRHLYVDGGITIQRFLNAGLIQRLIITRIPVLLGDGIPLFGQLRNDIRLEHVGTRA
                     FPSGMVQSEYIIAA"
BASE COUNT          335 a          641 c          601 g          349 t
ORIGIN      
        1 ccggcctgga cctgacacag ctgcaggacg cgttcaagtc cggcgtccgc acctttctct
       61 tctccaatcc caacaacccg accggggtgg tctactcgcc acaggagatc gcggccattg
      121 ccgagctcgc caatcgatac ggcgtgacgg tgatcgccga cgagctgtat gcacggttgc
      181 tgtactccga ccagacctac acgcacatct gcgcggcggg gcttgcgccc gaccaggtgg
      241 tcaccatcct gggaccgtcc aagacggagt ccctgagcgg gtaccgtctg ggcgtcgcgt
      301 tcggggccac gcacctcatc gagcgcgcgg agaagctgca ggcgatcgtc tcgcttcgcg
      361 caccgggcta ttcccaggcc gttctgagca cctggttcga tgagccggaa gggtggctcg
      421 cggaacgcac cgccaggcat caggccattc gtgacgacct gatcgccgtc cttcgcacgg
      481 tcccggatct ctcggtccgc atgacagaag cggggagcta cctcttcccc cggttgccgg
      541 cgctggctct ggggctgcat gatttcgtgc gtgccgtacg tttgcaggcc aacgccgtcg
      601 tcacgccggg caccgaattc agccctgatg ccaccgacag catccgcctg aatttctcac
      661 agaatcacca ggccgcggta caagcggcgc aacggatcgc cgagttgatc gagcgctatc
      721 gggaatagcc ccgaggtgca ctgtgaccaa tcgccccggg aggctcatta tgaagtccct
      781 aaggcgtctc gcgccttccc ttggcttggc tggcctgctt gcggcctgcg ggtcaaccga
      841 gactaacgaa ggctgcctat ttgcgaactt agtcgacatc acggcgccga acgtcatgag
      901 cgtgggcgat accgtcacct tccaggccag cctggttccg ggcgggtgcc tgccggccgg
      961 cctcgagccc ggagactggc ggtggtccag ctccgacacc ctgatctcgc ggatcgactc
     1021 cctcacaggg ctggcacagg ggatcggtgg gggcaccgcg accattttgg tccagcactc
     1081 ccgcgccccg tgagtccagg acatcataca tctgcaagtt gttgcgggag ccggtcgtta
     1141 ggcagcctcc gagacttcgt ccaccttggg actcacatga aggcatccgt attcatcgct
     1201 accagtctcg acggcttcat cgcccgcaaa gacggggcgc tggactggct gccccacgat
     1261 ggtggtgagc cccatggcta tgatgagttc atcgccaccg tggacgccat cgttatcggc
     1321 cggcatacat ttgaaacggt gctcgccttc gaggtctggc cttacggaac caagcccgtc
     1381 atcgttctca cgtcgacgcc gtctgcgtgg accgcgcccg cgggcgcggt ctgcgacttc
     1441 atgacgggca gtccagccga gatctgcgac cggttgcgcc cacgtggcct caggcatctc
     1501 tacgtggatg gaggaataac catccaacga ttcctgaacg cgggcctgat ccagcggctc
     1561 atcatcaccc gcatcccggt gctcttggga gacgggattc cgctgtttgg ccagctccgg
     1621 aacgacattc ggctggaaca cgttgggact cgggcgttcc cgagcggcat ggtccagagc
     1681 gaatacatca ttgccgcctg acccgcgcct gcagccgaca agccggggcg gcggacgtgg
     1741 catggagttc gaggaggcgc caagatgacc agctttgacc gagccccggt aggcgaagag
     1801 cgggacgcgg agctcctccg gtcaacggag cgcgagcgac ttcgcgcgct ggtcacgggt
     1861 gatgttgaac gagccgggca gctgcacacc gaagactttc agctcatcaa ccccctcggc
     1921 ggcgcg
//
LOCUS       DASRPQ010001913         2472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1156555, whole genome shotgun sequence.
ACCESSION   DASRPQ010001913 DASRPQ010000000
VERSION     DASRPQ010001913.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2472
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1156555"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..347
                     /locus_tag="VFD73_21745"
     CDS             <1..347
                     /locus_tag="VFD73_21745"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HZI76596.1"
                     /translation="ATYALEVGLDVARDRARALAQYARGRLAELPDVRVLDRGPELCA
                     IATAAIRGREAQDLKLALRARGINTSSPEREDAVIDMDEKAATSALRISPHYYNTREE
                     IDTAVEALRELL"
     gene            complement(344..952)
                     /locus_tag="VFD73_21750"
     CDS             complement(344..952)
                     /locus_tag="VFD73_21750"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HZI76597.1"
                     /translation="MPSATRPAVLFLGTSLTAGYGIDPQQAYPALIQQKIDAAGLDYR
                     VINAGLSGETSAGALRRADWLFQQPISVLVLETGANDGLRGLPPDSLRANIQAILDRA
                     QRLHPRPRIVLVGMRVPPNYGRAYSQQFESVYPQLAKANGAVLVPFLLEGVGGVRALN
                     QADGVHPTAEGQRKMAETVWRVLEPVLRQGERRQGEAGERVS"
     gene            1063..1746
                     /locus_tag="VFD73_21755"
     CDS             1063..1746
                     /locus_tag="VFD73_21755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI76598.1"
                     /translation="MSGPILRCESVGRTYRSGDRDLTVLKDISFSLEPGAFLAILGPS
                     GSGKTTLLGLLAGLDRPTDGRIYLAGEDLGTLTEDERARLRVEKIGFVFQSFQLIPTL
                     TAQENVQVPLELRGDSGTVQRSRELLSRVGLGGREHHYPAQLSGGEQQRVALARAFGI
                     RPQLLFADEPTGNLDASTGATIIQLMVELNQESSTTVVLVTHDLELAARARRTIRLAD
                     GAIVGDTGA"
     gene            1743..>2472
                     /locus_tag="VFD73_21760"
     CDS             1743..>2472
                     /locus_tag="VFD73_21760"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI76599.1"
                     /translation="MIALNFVIRMALRELRASPRRLLLLVGTIAIGVSALVAIDSFSD
                     NLRESVRQQSRALLGADLSLVSRQPLSKTTESVIDSYSRGNEQSRVTSFAGMAYVTRT
                     EGSRLVQVAAVSGRYPLYGEIRTAPRQAWQELQSGRHVVVDPSLLTAFNARLGDTLAL
                     GEARFVITGTIVSAPSEVGFRFALGPRVYIPAADLRDTRLLGFGARAQYEVFLKIPSN
                     ASAQALADRYRSSLRSERVSVRTVA"
BASE COUNT          442 a          790 c          768 g          472 t
ORIGIN      
        1 cggccacata cgcgctggag gtcggcctgg acgtggcccg cgatcgcgcc cgagccctcg
       61 cgcaatacgc gcgcggccgc ctggccgagc tgcccgacgt acgagtcctc gaccggggac
      121 cggagctctg tgccattgca acagcggcca ttcgcgggag agaggcccag gacctgaagc
      181 tggcactgcg tgcacgcggc atcaacacca gctctcccga acgggaagat gccgtgatcg
      241 atatggatga aaaggcggcg acctccgcat tacggatttc gccgcactac tacaatacca
      301 gagaggagat cgacacggcg gtcgaggcgc tgcgagagct tctctaggaa actctctcgc
      361 cggcttcccc ttgccgccgt tccccttgtc tcagcacagg ctccaatacc cgccacaccg
      421 tctcagccat ctttcgctgc ccctcagcag taggatgcac tccgtcggcc tggttgaggg
      481 cacgcacccc gccgactccc tccagcagga agggaacgag taccgctccg tttgctttgg
      541 cgagctgggg atagaccgat tcgaattgtt ggctgtaggc tcgtccgtag ttcggtggaa
      601 cccgcatgcc taccagaact attctgggtc gcgggtgaag ccgctgggcc cggtcgagaa
      661 tcgcctggat gttggcccgt agcgaatctg gaggcaggcc ccgcagtcca tcgttggctc
      721 cagtctcgag gaccagcacc gagatcggct gctgaaacag ccagtccgcc ctccggagcg
      781 cgcccgccga ggtttcccca ctcagtcccg cgttgatgac cctgtagtcc agccccgccg
      841 catcgatttt ctgctgaatc aaggcaggat acgcctgttg aggatcgatg ccgtacccgg
      901 ccgtaaggct ggtacccaaa aacagaacag caggacgcgt ggcagaaggc atggctgagg
      961 tttggctcgc tgatttcgag gtggccgatt ggttggattg gccgcaactg aggagtgcga
     1021 cagcaacagc ggagagcgaa agataccggt gtatcattga gaatgtctgg cccaattctg
     1081 cgatgcgagt cggtcggccg gacctatcgg tccggtgacc gggatctgac cgtgctgaag
     1141 gatatcagct tcagtctcga gcccggcgcc tttcttgcca tcctggggcc gtcgggcagc
     1201 ggcaagacca cgctcctcgg tcttcttgcc ggtctggacc ggccgaccga tgggcgcatc
     1261 tacctcgctg gagaggacct cggcacattg accgaggatg agcgagcccg ccttcgagtc
     1321 gaaaagatcg gcttcgtctt tcaatcgttt cagctgatcc ccacgctcac ggctcaggaa
     1381 aatgttcagg tccccctgga gctccgcggt gattcgggga cggtacagcg atccagagag
     1441 ctgctgagcc gggttggtct cggtggacgc gagcaccact atccggcaca gttatccggt
     1501 ggtgagcagc agcgggtcgc cctggcgcgg gcgtttggga tccgccccca gctgttgttt
     1561 gccgatgagc ccaccggcaa tctggatgct tcgaccggag cgacgatcat ccagctcatg
     1621 gtggagctga atcaggagag cagtaccact gtggtgctgg tcactcacga tctcgagctg
     1681 gcggcaaggg cgcggcgcac tatacgactg gccgacgggg caatcgtggg cgataccggc
     1741 gcatgatcgc cctcaacttc gtaattcgaa tggcgctgcg cgagctacgg gcttcgccac
     1801 gacgcctgct cctgctcgta ggcaccatcg ccatcggtgt ctccgctctg gtagcaatcg
     1861 actcgttcag cgacaacctt cgagaatccg ttcggcaaca gtctcgcgca ttgctcggcg
     1921 ccgacctctc gctggtgagc cggcagcccc tctccaaaac aacggaaagc gtgatcgatt
     1981 catactctcg cgggaacgag cagtcccggg tcaccagctt tgcgggaatg gcgtacgtaa
     2041 cccgcaccga gggaagccgc ctggtccagg tggccgcggt gtccggtcgc taccctttgt
     2101 acggcgagat tcgaaccgcg ccacgtcagg catggcagga gctccagtcg ggacgccacg
     2161 tcgtggtcga tccctcgttg ctcactgcat tcaatgctcg gctgggcgat acacttgccc
     2221 ttggcgaagc tcgattcgtg atcaccggga ccatcgtcag cgcccccagt gaggtcgggt
     2281 ttcgctttgc gttgggcccc cgggtgtaca tccccgcggc cgacctccgg gatactcggt
     2341 tgctggggtt tggcgcccga gctcaatacg aagtgttcct caagatccca tctaatgcgt
     2401 cggctcaggc actggcggac cggtaccgtt ccagcctccg ctccgaacgg gtctcggttc
     2461 gcaccgtcgc cg
//
LOCUS       DASRPQ010001914         1011 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_531569, whole genome shotgun sequence.
ACCESSION   DASRPQ010001914 DASRPQ010000000
VERSION     DASRPQ010001914.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_531569"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..>1011
                     /locus_tag="VFD73_21765"
     CDS             124..>1011
                     /locus_tag="VFD73_21765"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZI76600.1"
                     /translation="MSQLSKSATGVVFCGIDVSAATLAVAVEQQDQPVVEREFPNNAS
                     GHKALIGWLGQRGQARVSLEATGVYSLDLALALDAAEGIEVQVLNPKVAHRFGQTLSR
                     SKTDPVDARTLAVYSRRMEFTGWRAPSRSQMQLRSLTRHIDNLTAELTRGKNRLHAAK
                     VSDMTPACIVEDLQNALESLECRIHVLRREALALVRADAVLKENFELLISIPGIARVS
                     ALQILGELVVLSPELSVRQWVAHSGLDPAHHISGSSIHKPSRISRAGNRALRRVLYMP
                     ALVAIQHDPHIKAFYRALVH"
BASE COUNT          196 a          317 c          301 g          197 t
ORIGIN      
        1 ttttgacgcc gtggagaatc gaaggccttt tgagcctgca tgttcaaggt cggcgagaag
       61 agtaagtccg tgtccgcgga cagggacgga agccgagacc acatcgtaaa acggagaggg
      121 tcgatgagcc aactatccaa atctgctaca ggcgtggttt tctgcggtat cgacgtcagt
      181 gcagccactc ttgcggtggc tgtcgagcaa caggatcaac ccgtggtgga acgtgagttc
      241 cccaacaacg cgagcggtca caaggccctg atcggctggc ttggccagcg gggccaggcc
      301 cgtgtatcgc tggaggcgac aggggtttac tcgttggacc tggcgttggc gctggatgca
      361 gccgaaggga tcgaagtcca ggtcctgaac cccaaggtgg ctcatcgctt cggtcagacc
      421 ctgtcccggt ccaaaaccga tccagtcgat gcgcgaaccc ttgccgtcta cagtcggcgg
      481 atggagttta ccggctggcg tgcgcccagt cgcagccaga tgcagttgcg ctctctgacc
      541 cggcatatcg ataacctcac ggccgagctt acccggggca agaaccgcct gcacgccgcc
      601 aaggtatctg atatgactcc agcctgtatc gtcgaagacc tccagaacgc actggagtcg
      661 ctggagtgcc gcatccacgt tcttcgccgc gaagccctcg cgctggtgcg tgccgacgcg
      721 gtgctcaagg aaaacttcga gctgctcatc agcatccctg gcatcgccag ggtcagcgcc
      781 ttgcagatac tgggcgaact ggtcgtgcta tcgccggagc tgtcggtgcg ccagtgggtc
      841 gcacatagtg ggcttgatcc tgcccatcac atctccggct cttcgatcca taagccctca
      901 cggatcagcc gcgccggcaa ccgtgcactc cggcgtgtcc tctacatgcc cgccctggtc
      961 gccatccagc acgatccaca catcaaagcc ttctatcgag ctctggtcca t
//
LOCUS       DASRPQ010001915         1086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4289377, whole genome shotgun sequence.
ACCESSION   DASRPQ010001915 DASRPQ010000000
VERSION     DASRPQ010001915.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4289377"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..666
                     /locus_tag="VFD73_21770"
     CDS             <1..666
                     /locus_tag="VFD73_21770"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HZI76601.1"
                     /translation="AYMKVRGGNVFRVGIPRVTPGLPSELLIQRPDIRSAEAQLASAD
                     ASVVAARAAFFPSISLTGEYGVASTALKNLFTPQAIFYQIAAGLVQPVFDGFRLEGQL
                     EQAKGHQLELLSTYRKSIVSGFHDVEQALIAITDNAELERLQRQVVTASRQAFNIAET
                     RLREGTVDLTTVLITQQALFQAQDTEVVVRLARLQAALSLYQALGGSWMPPDKKGAIN
                     AKG"
     gene            696..>1086
                     /locus_tag="VFD73_21775"
     CDS             696..>1086
                     /locus_tag="VFD73_21775"
                     /inference="COORDINATES: protein motif:HMM:NF024923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HZI76602.1"
                     /translation="MCLTLAAGIVYYWAPWQSSAQQTVVNKKGKGKRGLGSTTPGEAV
                     PVLAVEARVADVPVYLDGVGTARALNTVTVRPQVDGKLLSLSFTEGQDVPKGFLLAKI
                     DPATYQAMYDQAVAKKAQDEATLANAKL"
BASE COUNT          210 a          343 c          336 g          197 t
ORIGIN      
        1 gcttacatga aggtgcgggg cggtaacgta ttccgggtag gcatacccag ggtgaccccg
       61 ggtcttcctt cagagctttt gatccagcgg cccgatatcc gctctgccga agcgcagctg
      121 gcctcggccg atgcgagcgt agtcgccgcg cgcgccgcat tcttcccgag catctcgctg
      181 accggcgaat acggcgtagc cagcaccgcg ctgaagaacc tgttcacccc gcaggcgatt
      241 ttctaccaga tcgccgccgg actggtgcag ccggtatttg acggatttag gctcgaagga
      301 cagctcgagc aggccaaggg ccatcagctc gagcttctca gcacctaccg caagagcatt
      361 gtctccgggt tccacgatgt ggagcaagct ctcattgcga tcaccgacaa tgccgagctg
      421 gagcggctgc aacggcaggt ggttaccgcc tcgcgccaag ccttcaatat cgccgaaacg
      481 cggctgcgcg agggtaccgt tgaccttacg accgtcctga tcacccagca ggcgctgttc
      541 caggcgcagg ataccgaggt ggtggtccgt ctggcccggc tgcaagccgc attgagcctg
      601 taccaggcac tgggtgggag ctggatgccc ccggacaaaa aaggcgctat aaacgccaaa
      661 ggatgacccg gaccggacgt attgcctttt cccttgtgtg cctgaccctc gcggcaggca
      721 tcgtttatta ttgggcaccc tggcagagct ccgcgcagca gacagtcgtt aacaagaagg
      781 ggaaaggtaa acgcgggctc ggcagcacca cgccgggtga agcggttccg gtgcttgcgg
      841 tcgaggcgcg cgttgccgat gttccggtct acctcgacgg cgttggaacc gcgcgcgcgc
      901 tcaacaccgt gacggtccgt ccgcaggtcg acggcaagct cctctcgctt tcgttcaccg
      961 agggacagga cgttcccaag ggcttcctgc tggccaagat cgatcccgcg acctatcagg
     1021 ccatgtacga tcaggctgtg gccaagaaag cgcaagacga ggccactctc gccaatgcga
     1081 agctcg
//
LOCUS       DASRPQ010001916         1078 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3038722, whole genome shotgun sequence.
ACCESSION   DASRPQ010001916 DASRPQ010000000
VERSION     DASRPQ010001916.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3038722"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1043
                     /locus_tag="VFD73_21780"
     CDS             <1..1043
                     /locus_tag="VFD73_21780"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HZI76603.1"
                     /translation="LEVRGGGLDAFTGRDYTSYQAHVLDADLPLALEILTDLVRRPLL
                     RQSDLESERNVVLEEINGVADTPDDLVFELHARALWPTHPYGYSILGTPESLEALSAD
                     DLQALHRKGYYRGNCVIAAAGNVDHSQLLTVLEREGWFEGPTREAPRPAVRATPAVRG
                     GNCTEHRDTAQTHIVFGTDTFPLRDRRRFPLAILVNVFGGGMSSRLFQRIREELGLAY
                     AIYAYKQFFQSSGQLGVYIGTQPSAADKAVDAIREQYAHLADQGLPPAELTNGKQQLK
                     GQIMLSLESPGARMARLAGFVLYEDEYRPLDAMLSEIDRITPDDIAAVASEFFAPERQ
                     TVVRLGPEKSEP"
BASE COUNT          204 a          334 c          337 g          203 t
ORIGIN      
        1 agctggaggt gagaggtggg ggactcgacg ccttcaccgg gcgagactat accagctatc
       61 aggcacacgt cctcgatgcc gatcttccgc tggccctgga gatcctgacc gatctggtgc
      121 gccggccgct tctccggcaa agtgatctgg agtcggagcg caacgtcgtg ctcgaagaaa
      181 tcaacggtgt ggccgacacg ccggacgatc tcgtattcga gctccacgct cgggcactct
      241 ggccaaccca tccgtacggc tattcgatcc tgggaacccc ggagagtctc gaggcgctgt
      301 cagccgacga tctgcaggcg ctccaccgca aagggtacta tcgggggaat tgcgtcatcg
      361 cggccgcggg aaacgtggat cactcgcagc tgctcacggt gctcgagcgc gaaggctggt
      421 tcgaaggccc cacccgagaa gctccccgtc ctgcagtccg ggcaacgccg gcggtcagag
      481 gcggtaactg caccgagcat cgcgacaccg ctcagaccca tatcgttttc ggcaccgata
      541 cttttccgct gcgggaccgc cgccgctttc ctctggctat cctggtgaat gtgttcggcg
      601 gcgggatgtc gagccgcctc tttcaacgca ttcgtgaaga gctgggtctg gcctatgcga
      661 tctatgccta caagcagttc ttccagagtt ccgggcagct gggagtgtat atcggtaccc
      721 aaccgtcggc ggcggacaag gcggtcgacg caattcgcga gcagtacgcc cacctcgccg
      781 atcagggact gccgccggca gagctgacca acggaaagca gcagctcaag ggtcagatca
      841 tgttgtcgct cgaaagcccc ggcgcccgca tggctcggct ggccgggttc gtcctctatg
      901 aggacgaata tcgtccgttg gacgcaatgt tgagcgagat cgatcgaatt acgcccgacg
      961 acatagccgc ggtggccagc gaatttttcg cgcccgagcg ccagacggtg gtgcgtctcg
     1021 ggcctgaaaa gtcggaaccg tgaggcagtt tacagttttg cactcctctc tcaggaag
//
LOCUS       DASRPQ010001917         2653 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4289892, whole genome shotgun sequence.
ACCESSION   DASRPQ010001917 DASRPQ010000000
VERSION     DASRPQ010001917.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2653
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4289892"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..257)
                     /locus_tag="VFD73_21785"
     CDS             complement(<1..257)
                     /locus_tag="VFD73_21785"
                     /inference="COORDINATES: protein motif:HMM:TIGR01662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HZI76604.1"
                     /translation="MSAKRPAVFLDRDGTIIQDAGYLKEPEQVQLLPGSAEAIRQLTV
                     AGIPVVVVSNQSGIARRLLSVDDYRRTEARLEELLAQKGVKL"
     gene            complement(254..1606)
                     /gene="selA"
                     /locus_tag="VFD73_21790"
     CDS             complement(254..1606)
                     /gene="selA"
                     /locus_tag="VFD73_21790"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004125 - L-seryl-tRNA(Sec) selenium
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016260 - selenocysteine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HZI76605.1"
                     /translation="MDDRRRLPSVDRVLRQPEVQALMATAPRAAVVAAVRESIEAART
                     RRAGPPEHWGEEVRERLSHHTGASLLPVLNATGVVLHTNLGRAPLADVALRAIQNVAQ
                     GYSNLEFDLPSGARGSRSDHCRALLQAVTGAEDGLVVNNAAGALVLALNTVADGRDVL
                     ISRGELIEIGGSFRIPDIIEKGGARLREVGTTNRTHLEDYRAEVSRAAALLTVHRSNF
                     EQRGFVTSPEPAELAKLAASAEIPYLYDVGSGLLLDLSAWGLKGEPTVQDAVLAGAGL
                     VIFSGDKLLGGPQAGCLVGRADLVGRCRSNPLARALRADKLSLAALAATLNLYLDPEQ
                     ARISIPVLSMLTLSAEELQRRAQRLAALCSPSCRPRTISGLSAVGGGAFAGASLPTTL
                     VALDSEDLGADGLALRLRHSDPPVVTRVAEGRVLLDPRTLPEDSFPLIARAIETALLG
                     "
     gene            complement(1606..>2653)
                     /locus_tag="VFD73_21795"
     CDS             complement(1606..>2653)
                     /locus_tag="VFD73_21795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HZI76606.1"
                     /translation="NRGEGTGGLEKLILLSPTPNVPEVRWRRSRITVRPKEGWQPNRV
                     YRVQLLPGVTDLRNNRSEQTSVLTFMTGAPRPQTTLKGVVVDWSSSRPATGALVVAAL
                     LPDSLAYRGAADSSGHFSLGPLPAGDYVVTGVLDQNQNQKADPREAFASTRVQRGRAD
                     VGEIWTFVHDTNPPRIQTIAVNDSVSATVTFSQKLDPRQRLTPRDVRLRLLPDSVPTA
                     VASILPKPVDDSLNRGGAVPDTTRRDTLKTPKTPDTLGVRPNSEPGVRARNAPPPAAL
                     TSRPPLFDNLVLRVPRPWQPGNRLVLEVRGVRNITGIAGNPVGVVAVPEKPKPVGKDT
                     TRAAPRRPPPPTPR"
BASE COUNT          456 a          877 c          872 g          448 t
ORIGIN      
        1 agcttcacgc ctttctgtgc gagcagttcc tcgaggcgcg cttcggtccg gcggtagtcg
       61 tcgaccgaga gaagtcggcg agcaatcccg gactgattgg acacgaccac caccggaatt
      121 cccgcgacgg tcagctgccg aatcgcttcg gccgagccgg gcagaagctg gacctgctcc
      181 ggctccttca gataaccggc gtcttggata atcgtcccat cgcgatcgag aaataccgcc
      241 ggacgcttgg cgctcacccc agcaatgccg tctcgatcgc gcgcgcgatc aggggaaagc
      301 tgtcctcagg cagggtacgg ggatcgagca acacgcgacc ctcggccacg cgggtgacga
      361 ccggagggtc actatgccga agtcgcaacg ccaatccatc ggcgccgaga tcctctgaat
      421 cgagagcgac cagggttgtt gggagcgaag ctccagcaaa cgcacccccg ccgaccgccg
      481 ataaccccga gatggtcctg ggccggcagg acggagaaca aagcgccgcc agtcgttgcg
      541 ctcgccgctg cagctcctcg gcggaaaggg tcagcatcga gagcaccggg atcgagatcc
      601 tggcctgctc cggatccaga tacaggttca gggtggcggc gagcgccgcc agactcagct
      661 tgtcggcgcg cagcgcgcgg gccagcggat tggaccggca gcggccaacg agatcagcgc
      721 gaccgacgag gcagcccgcc tgcggaccgc ccagcagctt gtctccactg aaaatcacga
      781 gccccgcccc ggccagaacg gcatcctgaa ctgtgggctc gcccttcaat ccccaagcgc
      841 tgagatccag taacagtccg ctgcccacat cgtagaggta cgggatctct gccgaagcag
      901 ccagtttcgc cagctctgcg ggctcaggag aggtgacgaa cccgcgctgc tcgaagttgg
      961 agcgatggac agtcaagagt gcggccgctc ggctcacttc tgcccgatag tcctccaggt
     1021 gcgtgcgatt ggtagtgccg acttcccgca gtcgcgctcc acccttctcg atgatgtcgg
     1081 gaatccggaa cgacccgccg atctcgatca gctcaccgcg ggagatcaaa acgtcacgcc
     1141 catcggccac agtattcagc gccaggacca acgctccggc cgcattattc accactaacc
     1201 cgtcctctgc tccagtgacc gcctgcagca acgcgcggca atggtcagat cggcttcccc
     1261 gggcgccgga gggaaggtcg aactcgagat tgctgtagcc ctgggcgacg ttctgaatgg
     1321 cccgaagggc aacgtccgcc agcggggctc gccccaggtt ggtgtggagc acgacaccgg
     1381 tggcgttgag taccggaagc aggctcgcgc cggtgtgatg gctcaggcgc tcgcgcacct
     1441 cttcgcccca atgttcgggc ggtccagcgc ggcgggtccg ggcggcctcg atcgactccc
     1501 gcactgcggc gacgaccgcg gctcggggcg ctgtggccat caaggcctgg acttcgggct
     1561 ggcggagcac ccggtctacg gagggaagcc tgcgccggtc gtccatcagc gtggagtcgg
     1621 cgggggaggt cggcgagggg cagcgcgagt ggtgtccttg ccgaccggct tcggtttttc
     1681 aggcacggcc accacgccca ccgggttacc cgctatcccg gtgatgttcc tcactccccg
     1741 gacctcgaga accaggcggt tgcccggctg ccaggggcgt ggcacgcgga gcaccagatt
     1801 gtcgaacagg ggagggcggc tcgtgagcgc tgccggtggc ggagcattcc tggcgcgcac
     1861 tccaggctca gaattgggac gaaccccaag tgtgtctggc gtcttcggcg tcttcagggt
     1921 gtcccgcctc gtggtgtcgg ggacagctcc gccgcggttg agactgtcgt ccaccggctt
     1981 cggtaagatc gatgccaccg ccgtcggaac cgagtcgggc agcagtcgca agcggacatc
     2041 acgcggagtg agtcgctgcc gcggatccag cttctggctg aaggtcaccg tcgcggacac
     2101 actatcgttt accgcgatcg tctggatccg tggtgggttg gtgtcgtgca cgaaggtcca
     2161 gatctcgccg acgtccgctc gtccgcgttg cacccgcgtg cttgcaaacg cttctctcgg
     2221 gtcagctttt tgattctggt tctggtccag cactccggtc actacgtagt cgccggcggg
     2281 gagcggtccc aggctgaaat gaccgctgga gtcggcggcg ccgcgatagg ccaggctgtc
     2341 gggcaagagg gctgcaacca ccaacgcgcc ggtcgcaggc cggctgctcg accaatcaac
     2401 gaccacaccc ttcagcgtgg tttgaggcct cggtgctccg gtcatgaacg tgaggaccga
     2461 ggtctgctcg ctccggttgt tccgaagatc ggttacccca ggcagcagct ggacccggta
     2521 gacccggttc ggctgccatc cctctttcgg ccggacggtg atgcggctcc ggcgccagcg
     2581 aacctcggga acgttgggtg tcggggagag caggatcagc ttctccaatc caccagttcc
     2641 ttcaccccgg ttc
//
LOCUS       DASRPQ010001918         1268 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4290050, whole genome shotgun sequence.
ACCESSION   DASRPQ010001918 DASRPQ010000000
VERSION     DASRPQ010001918.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1268
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4290050"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            551..>1268
                     /gene="cpaB"
                     /locus_tag="VFD73_21800"
     CDS             551..>1268
                     /gene="cpaB"
                     /locus_tag="VFD73_21800"
                     /inference="COORDINATES: protein motif:HMM:TIGR03177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HZI76607.1"
                     /translation="MAASRVSLSPAGHLSTGRRFLFMLGVVLAGAGFLVTLVLGSFLI
                     MRAQQVSGGVQVVVAAHDVQAREALDAASVQIVTYPSNLAPTNALTALDAAVGKYALT
                     DITERQVLTSAMVSSQPVSEQAAGQSYLPIPDGSVALTIPTSEQEGVAGYISPGDYID
                     VVVTLSTGVFGQQPAKTVTKTIFTNLHVIRVGPETASAQGAAGGVSSSLTVIVSSCDG
                     EMLSWLLNNANLRYELRSYKN"
BASE COUNT          228 a          412 c          388 g          240 t
ORIGIN      
        1 tgttcgccgc cggcctacga agccggacct tgccctgaac agaacttaac caccgttgcc
       61 tcatccaccc atagggcatc tgccccatcg tggtcagact cgggtccgga tcgctgtggg
      121 ctggtcggca aacagggcgg actgcgaacg ccggccgcaa cgtggactgc atggattggc
      181 gaagcccatt gagcgtacag atgcggattg gctctgactc gcaggctcca ttgccggctg
      241 aatcgaacct gccgcagggc atccgcccat gctcctgggt cacggccaca tcctcgtggg
      301 cggaccggca cgggacttgc tcgatcagcg tggcagtccg ctaaccactg gcgggcgatg
      361 gacgagagat gagcaatctt gctcaaacca gtgagtagat cgcctctcga ccagtccgcc
      421 tgcggcggca atgatcttcc cgttccgacc cttgatgggc cggcagcagt gaatctcaac
      481 cccttcgacc aatcaggccg ccctgtgctg ggcgtccgaa acacatttga aaggcacagg
      541 agcttagtga atggcagcca gtcgcgtatc gctttcgccc gcgggtcacc tgtccaccgg
      601 acgccgcttc ctcttcatgc tcggcgtggt tctcgccggg gcgggtttcc tcgtcacgct
      661 ggtcctcggt tcgttcctga tcatgcgcgc gcagcaggtc agcggcggcg ttcaggtggt
      721 agtcgcagcc cacgacgttc aggctcgcga agcgctcgat gcggcctccg tccagatcgt
      781 cacctatccc tctaatctgg cgccgaccaa cgcgctcacg gcgctggacg ccgcggtcgg
      841 caagtacgcg ctcacagaca taacggagcg ccaggtgctg acgtccgcga tggtgtcgag
      901 tcagcccgtc agcgagcagg cagccggtca gagctatctt ccgatcccgg atgggtcggt
      961 cgcgctgacg attccgacct ccgagcagga aggggtcgcc ggctatatct cgccaggcga
     1021 ctacatcgat gtggttgtga ccttgagcac cggcgtgttc gggcagcagc cggcgaagac
     1081 ggtgaccaaa acgatattca ccaaccttca cgtcatccga gtcggtccgg aaaccgcctc
     1141 cgctcagggc gccgccggtg gagtctcctc gagcctgacg gtgattgtca gttcctgtga
     1201 tggagagatg ctgagctggc ttctcaacaa cgcgaacctg cgctacgagc tgcgctcgta
     1261 caagaact
//
LOCUS       DASRPQ010001919         1132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1496662, whole genome shotgun sequence.
ACCESSION   DASRPQ010001919 DASRPQ010000000
VERSION     DASRPQ010001919.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1496662"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VFD73_21805"
     CDS             <1..180
                     /locus_tag="VFD73_21805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76608.1"
                     /translation="LPEVLYLETWPEGCGRRDMIHFEQLGYGVDMATGATSTITRYER
                     VTKARRLTKAKVRRG"
     gene            173..490
                     /locus_tag="VFD73_21810"
     CDS             173..490
                     /locus_tag="VFD73_21810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76609.1"
                     /translation="MADRHLYQNSEVIYVAHSPEHAAELLLQDMDGDTSYTDSDPFVL
                     IPDEEPLELGSDESNGAAGEVARDAKNRDGQAVGTYYYETKLAREWVAEWNGVGHLSG
                     GDY"
     gene            490..1071
                     /locus_tag="VFD73_21815"
     CDS             490..1071
                     /locus_tag="VFD73_21815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76610.1"
                     /translation="MADETAEHRAFVAWFQTLDMQQRINVWYDCEAQTAAEVRGYLEG
                     HLGKLQAGESRAQAAEQQVEQLKADLSAALRLVELRSVRCTCHSGPLRAGQVHADWCA
                     LRQSKDSSPAGGAPVPRTAPHRGDGPTEALRREIVEALREQAGPDSGSLTTVKRWQFT
                     KLADKLESKGKVSGHLTTDPAPMSKPSDDGSGR"
BASE COUNT          232 a          343 c          385 g          172 t
ORIGIN      
        1 ctccccgaag tgctctatct ggagacgtgg cccgagggct gcggtcggcg agacatgatc
       61 cacttcgagc aactcggcta cggcgtggac atggccaccg gggcgacctc gacgattacg
      121 cggtacgagc gggtgactaa agcccgccgc ctcacgaaag cgaaggtgcg acgtggctga
      181 tcgtcatttg taccaaaact ccgaagtcat ctacgtcgcg cactcacctg agcacgcggc
      241 cgagttgctg ctccaggaca tggacggcga caccagctac acggacagcg acccgttcgt
      301 tttgatcccg gatgaggagc cactggagct gggcagcgac gagtcgaacg gcgctgctgg
      361 cgaggtggcg cgcgacgcca agaatcgtga cggtcaggcc gtcggcacct actactacga
      421 gaccaagctg gctcgggagt gggtcgccga gtggaatggt gttgggcacc tcagcggagg
      481 tgactactaa tggctgacga gactgctgag caccgagcct tcgttgcttg gttccagacg
      541 ctggacatgc agcagcgcat caacgtctgg tacgactgcg aggcccagac ggcggctgag
      601 gtgcgagggt acctggaagg ccaccttggt aagctccagg cgggcgagtc ccgcgcccag
      661 gcagccgagc agcaagtcga gcagctgaaa gcggacctga gcgcggcact gcgactggtg
      721 gagcttagaa gcgttcggtg cacttgccac agcgggcccc tacgcgctgg ccaggtacat
      781 gccgactggt gcgccctccg ccagtcaaag gactccagcc cggcaggggg tgctccggtg
      841 ccacgtaccg cgccacaccg cggagatggg cctaccgagg cgctgaggcg ggagattgtg
      901 gaggcgttac gggagcaagc tggccccgat tccggctcgt tgactaccgt caagcgctgg
      961 caattcacca agctagccga caagctcgaa tcgaaaggga aggtgagcgg ccacttaaca
     1021 acggacccag cgcccatgag caagccgagc gatgacggga gcgggaggtg aagcgctccg
     1081 ctcaatacgg cggtctccag atcggtccgt cgcgcaacag gattgagccc ac
//
LOCUS       DASRPQ010001920         8524 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3986684, whole genome shotgun sequence.
ACCESSION   DASRPQ010001920 DASRPQ010000000
VERSION     DASRPQ010001920.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8524
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3986684"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1240)
                     /gene="rho"
                     /locus_tag="VFD73_21820"
     CDS             complement(<1..1240)
                     /gene="rho"
                     /locus_tag="VFD73_21820"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017492510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HZI76611.1"
                     /translation="MDIAELKQKSVAELHTLAEQLNITNYSGLRKQDLIFRIEQSLLD
                     SDTVIRGEGVLEILPEGYGFLRSQDWNYLYGPDDIYVSPSQIKRFDLRTGDTVMGQVR
                     PPKEGERYLALLKVEQVNFEEPEKTKHRIAFDNLRPRYPDARIRLERKNGDLSMRVVD
                     LLSPLGKGQRALIVAPPKAGKTILMQKLANAISENHPEIVLIVLLIDERPEEVTDMEE
                     NVKAEVISSTFDEPADRHVQVADMVIEKSKRLVEHGRDVVILLDSITRLARAHNVVVP
                     HSGKILSGGVDANALQKPKRFFGAARNIDKGGSLSIIATALIDTGSRMDEVIFEEFKG
                     TGNSELVLDRRLADRRIYPAIDIQRTSTRKEELLMDKDELNRVYLLRNFLADMPPVEA
                     LEFLLERMKRTKNNKEFFATM"
     gene            1523..1705
                     /locus_tag="VFD73_21825"
     CDS             1523..1705
                     /locus_tag="VFD73_21825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76612.1"
                     /translation="MNDSERLSRLRHDLSNPLSALLAETQLLLLNESQIDPQTVTSLR
                     EIEALAIRMRTMLREI"
     gene            complement(1746..2840)
                     /locus_tag="VFD73_21830"
     CDS             complement(1746..2840)
                     /locus_tag="VFD73_21830"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HZI76613.1"
                     /translation="MASIILPQVIAAMPHAEAAKPVVAGSANCLIVDDEPSVRRSLSR
                     MLQAQGFHCLEACSGRQGLEVLNQTGEIPLIISDMRMPELDGMGFLEQVRQRFPDSSV
                     IMLSGISETTTAVDCLHLGAADFLLKPISLGELQARVARALEKRALVLQNRFYQEHLE
                     RQVQEQAQRIQELFLQGVQMLARALEAKDAYTRGHSIRVSQYAVATAARLGFDGPGLD
                     GIRLGGELHDIGKIGTRESVLHKPTSLTPEEFKQITEHPALGERMLSPLAHESPDVLR
                     IVRSHHERLDGRGFPDGLRGEMIPIEARIVAVADSFDAMTTRRPYREARPPLDAMREL
                     RRVAGTQLDPEAVEAFVAAYPDPKELPVSA"
     gene            2965..5877
                     /gene="acnA"
                     /locus_tag="VFD73_21835"
     CDS             2965..5877
                     /gene="acnA"
                     /locus_tag="VFD73_21835"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HZI76614.1"
                     /translation="MTDTFEARSTLQVGGRTFEIFRLSALAKSGIDISRLPYSLKILL
                     EDLLRTEDGVSVTRADIEALARWSPTNRSSREIAFTPARVLLQDFTGVPAVVDLAAMR
                     DAMAELGGDPRRINPLQPVELVVDHSVQVDAFGTPQAFATNVDLDYQRNRERYQFLRW
                     GQRAFENFRVVPPNTGIVHQVNLEYLARVVFTSDENPQAHSGELPQAYPDTLVGTDSH
                     TPMVNGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFRLEGRLPEGATATDLVLTVT
                     ELLRRKGVVGKFVEFYGPGLSSLALADRATIGNMSPEYGATCAIFPVDDVTLQYLRFT
                     GRPEERVALVEAYMKEQGLFHTSRSPEPVFTDTLSLDLATVEPSIAGPRRPQDRIRLS
                     DAKRSFREALPSLLPAGTTLSGKGAAKGGSEGPTAVGVWGEGSPESPSARAVMVEDAT
                     EVLAHGSVVIAAITSCTNTSNPSVMLAAGLLAKKAVERGLQRKPWVKTSLAPGSKVVM
                     DYYDRAKLTPYLQQLGFDLVGYGCTTCIGNSGPLPMEISDAIQRRRLVACSVLSGNRN
                     FEGRINSDVRANYLMSPPLVVAFAIAGRIDIDLLHEPLGQDPKGVPVYLRDIWPTSAE
                     VEATLQSSIKSDMYRRSYGAVYAGDERWNALEVPGGNRFEWAPTSTYVRRPPYFDGMS
                     KENPTSVPEIRGARVLAVLGDSVTTDHISPAGSIKKDSPAGRYLLQQGVALSDFNSYG
                     SRRGNHEVLVRGTFANTRIRNRLAPGTEGGVTTYLPTGEVMSIYDAAVRYQHDGTPLL
                     VLAGKEYGSGSSRDWAAKGPSLQGVRAVIAESYERIHRSNLVGMGILPLQFVAGDSVE
                     SLGLTGREVFDIEGLSSAVQTGFQEGRMLEVTARAENGAQKNFRATVRIDTPQEVLYY
                     QHGGILQYVLRQLLWGRQKARAIGPGPATTSESRTNAKRVEQGSFESFPASDPPAY"
     gene            5962..6195
                     /locus_tag="VFD73_21840"
     CDS             5962..6195
                     /locus_tag="VFD73_21840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76615.1"
                     /translation="MPGVQARLKAEHKRRYLDLDPTVWYQVVPIFPGVTQRMVNMAGE
                     RLARLSTPRGFVTLRADHLEFRATDVEAKSHTP"
     gene            complement(6205..>8524)
                     /locus_tag="VFD73_21845"
     CDS             complement(6205..>8524)
                     /locus_tag="VFD73_21845"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HZI76616.1"
                     /translation="ALRILILEDVAMDAELVEYELQRASIPFVARRVDTRDGFLRELD
                     AFRPDVILSDYTLPRFDGMTALSLTRERAPAIPFLIVTGSVNEETAVGCMKAGATDYL
                     LKSNLARIGPAIQAALERERAREEKIRAESLLAASERRFRSLVQNSSDLVTIVAPDST
                     ILYASDSAERLVGYAPGQLVGTTLLGYVAASDAEAVRGLLQNSNGKSSGPVEFSLRRA
                     DGSPVWLEAVGSNLLADPTIQGIVLNARDVSERKRADRALRESEERYRDLFDNASDLV
                     CMSAPDGTLLYVNKAWQEGTRYSQDEIARMQLIDVVQPESRSHFTAVLRRVLAGERLD
                     HVELMLVPKSGPPITVEGNLSCTFKDGKPSVVRGIYRDVTERKRIDEQLRRAERMQAA
                     GKLAGGVAHEVNNMMTGVIGFSEFVLRSFDLNDPRRADVEEVIRAGTRAADVTRQLLA
                     FTRQQFLRPQLVQLNAVVSDMEKMLRHSLGEDKLLELRLSSESCQIRADRGQLEQVLI
                     NLVLNARDAIQGHGRVGIQTGCAVLDETYAERHGGVDIPPGRYVMLAISDTGCGMDGD
                     VQARIFEPFFTTKPVGQGTGLGLSTVYGIVKQSGGFVWVYSEVNQGSVFKVYLPEARG
                     LVTEPITDNLSVPLRGSETILVIEDEDVVRNLACRGLRDHGYMVLEATNGSEALDYIR
                     AHPGTVDLIISDVVMPEMGGRELGQNVALFEPELPILYMSGYTGEDVVQRGLLDPGVP
                     FQQKPFTPGTLAMKVRAMLDQHPRTHTTASTT"
BASE COUNT         1567 a         2688 c         2635 g         1634 t
ORIGIN      
        1 ccatcgtggc gaagaactcc ttattgttct tggtgcgttt cattcgctcc agcagaaact
       61 ccagcgcctc gaccggcggc atgtccgcca ggaagttacg cagcaggtac acccgattga
      121 gctcgtcttt gtccatcagg agctcctctt tccgggtgga agtccgctgg atatcgatcg
      181 cggggtagat ccgccgatcg gccaggcgac ggtccagcac taactcggag ttgccggtgc
      241 ccttgaactc ctcgaagatc acctcgtcca tgcggcttcc ggtgtcgatc agtgccgttg
      301 caatgatgct gagactgcct cccttgtcga tgttccgggc agccccgaag aagcgctttg
      361 gcttctggag agcgttggca tcgacaccgc ccgacaggat cttccccgag tggggcacca
      421 ccacgttgtg ggctcgggcc agacgggtaa tcgaatccag caggatcacg acatcgcgcc
      481 catgctccac cagccgtttg gatttctcga tgaccatgtc ggccacctga acgtgccgat
      541 cggccggctc gtcgaaggtc gaggagatga cctcggcctt gacgttctct tccatgtcgg
      601 tgacttcctc cggccgctca tcgatcaaca gcacgatcag cacgatctcc gggtggtttt
      661 cactgatggc attggccagc ttctgcatca ggatggtctt accggccttg ggcggagcga
      721 caatgagcgc gcgctggcct ttgccgaggg ggctgagcag atcgaccacc cgcatcgaga
      781 ggtcgccgtt cttccgttcc agccggatcc gggcatcagg ataacgcggg cggagattgt
      841 cgaaggcaat ccgatgcttg gtcttttccg gctcctcgaa gttgacctgc tcgaccttga
      901 ggagggccag gtaccgttcg ccctccttgg gcgggcgtac ctgacccatg accgtatcgc
      961 cggtccgcaa atcgaagcgc ttgatctggc tgggtgagac atagatatcg tcgggaccgt
     1021 agagatagtt ccagtcctgg cttcgcagaa acccataccc ctcgggcaag atttcaagca
     1081 cgccctcgcc gcggatgacc gtgtccgaat ccagcagcga ctgctcgatc cggaagatca
     1141 ggtcctgctt tcgaagtccc gagtaattgg tgatgttcag ctgttctgcc agagtatgca
     1201 gctcagcgac cgatttctgc tttagctcag cgatatccac gggtgggact ccagagcgga
     1261 cgggctcgcg agggtgcggg ccggggtgag ggattgtaag agtgcaagac cgagcgaggt
     1321 tggactgtat atagggcggg gcccagtggg cgccggaact aacaaatggg tgtggtgacg
     1381 gggagtgttc ctatgaacca gaagcaccct aaagtacgtg cgccgaaaga ggcagtcaag
     1441 aggcccagct accgcgcggg ccaggcgtgg gtgcggctct attgcttaag cctggaagcg
     1501 gtacgatgtt tggacactgt ctatgaatga ttcagagcgg ctgagcaggc tccgccacga
     1561 cctgtcgaat ccgctatccg ccctcctggc tgagactcaa ctccttttgc tgaacgaatc
     1621 acagatcgat ccgcaaacgg tcacgagtct gcgagagatc gaggctctgg cgatccggat
     1681 gcgtacgatg ctgcgggaga tctagagccg ggcgctcacc ggccggcccg tctgcatcag
     1741 agccgttacg ccgagacggg tagctctttg gggtcgggat acgcagccac gaacgcctcc
     1801 actgcttccg ggtccagctg ggtaccggct acccggcgca gttcgcgcat ggcatcgagc
     1861 ggcggccgcg cctcgcggta ggggcgccgg gttgtcatgg cgtcgaacga atcggcgacc
     1921 gcgacaatcc gtgcctcgat gggaatcatc tcgccgcgga gtccatccgg aaaccctcgg
     1981 ccgtcgagac gctcgtggtg cgagcgcacg atgcgcagca cgtcgggcga ttcgtgcgct
     2041 aaaggagaga gcatccgctc gcccaacgcc ggatgctcag tgatctgctt gaattcttcg
     2101 ggagtaaggg aggtgggttt gtgaaggacg gactctcggg ttccaatttt cccgatatcg
     2161 tggagctcgc ccccaagtcg gattccatcc aggccggggc catcgaagcc tagccgcgcc
     2221 gcggttgcga cggcgtactg gctgacccgg atggagtgcc ctcgggtgta ggcatctttg
     2281 gcttccaggg cgcgggccag catctgcaca ccctgcagaa acagttcctg aatgcgctga
     2341 gcctgctcct gcacctgacg ctccaggtgc tcctgataga atcgattctg cagtaccagc
     2401 gcgcgcttct ccagcgcacg cgccactcgc gcctgcaact cccccagcga gatcggtttc
     2461 aacaggaagt cggcggcgcc cagatgcagg cagtcgaccg ccgtggttgt ctcactgatg
     2521 ccactcaaca tgatcacgga gctgtcgggg aagcgttgcc gaacctgctc cagaaatccc
     2581 atcccgtcca gctcgggcat tcgcatgtcc gagatgatga gcgggatttc gccggtctgg
     2641 ttcaggacct ccagaccttg tcggccggag cacgcttcta ggcagtgaaa accctgggct
     2701 tgcagcatgc gtgacaacga ccggcggacg cttggttcat cgtccacgat gagacagttg
     2761 gcgctgccgg ccacgaccgg cttcgctgct tcggcgtgtg gcattgcggc tatgacctgg
     2821 ggtaggatga tggatgccac gaacatccaa tcggaccctc actgtaaatg catcgacccc
     2881 gattgtccac tgtcgatgat tttggcagca tagtgccacc gaaaacttcg tgcctcgaac
     2941 gcccctgcgg cttatgtttc ctgcatgact gatacattcg aggccagatc caccctccag
     3001 gtcggcggac gcaccttcga aatctttcgg ctgagcgccc tggccaagtc gggaatcgac
     3061 atttcccgcc ttccgtattc cctcaagatc ctgctggaag atctccttcg taccgaagac
     3121 ggcgtcagcg tgacgcgagc ggacatcgag gcgctggcgc ggtggtcgcc caccaatcgg
     3181 tcgtctcgcg aaattgcgtt tacgccggcc agggtgctgc tccaggactt caccggcgtt
     3241 ccagcggtcg tcgatcttgc cgccatgcgc gatgccatgg ccgagttggg tggagacccg
     3301 cggcgcatca atccgctcca gccggtggag ctggtggtgg atcattcggt tcaggtcgac
     3361 gcgttcggaa ccccgcaggc gtttgccacc aacgtggatc tcgactacca gcggaaccga
     3421 gaacgctacc agttcctgcg ctggggacag cgcgccttcg agaacttccg ggtggtgccg
     3481 cccaataccg ggattgtcca tcaggtgaat ctcgagtact tggcgcgggt ggtctttacc
     3541 tcggatgaaa atcctcaggc ccacagtggc gagctgccgc aagcctatcc ggataccctg
     3601 gtcggcaccg actcccatac tccaatggtc aatgggctgg gcgtcctcgg ctggggtgtc
     3661 ggcgggatag aggcagaggc cgccatgctg gggcagccgg tctcgatgct gattccggag
     3721 gtgattggct tccggctgga aggccgcctg cccgaaggtg ccacggcaac tgacctggtc
     3781 ctcaccgtca cggaactgct ccgtcggaaa ggggtggtcg gcaagttcgt cgagttttac
     3841 gggcccggtc tgagcagtct ggcgctggcg gaccgcgcca cgatcggcaa catgtcgccc
     3901 gaatacggag ccacctgcgc catcttcccg gtggacgacg tcacgctgca gtatctccgt
     3961 ttcaccggac ggcccgaaga gcgggttgcg ttggtcgagg cctatatgaa ggagcagggc
     4021 ctcttccaca cctcccgctc accggagccg gtgttcaccg acacgctgtc gctcgacctt
     4081 gcaacggtcg agcccagcat tgcgggcccg cggcggccgc aggaccggat caggctgtca
     4141 gacgccaaac gatccttccg cgaggcgctt ccgagtcttc tgccggccgg caccacgctg
     4201 agcggaaagg gcgcggccaa aggtggcagc gagggcccca ccgccgtcgg tgtctgggga
     4261 gaaggctctc cggaatctcc ttcggcgcgt gcggtgatgg tggaagatgc gaccgaggtt
     4321 ctggctcatg ggtccgtggt cattgcggcg atcaccagct gcaccaacac ctccaacccc
     4381 tccgtgatgc tggcggcggg actgctggcg aagaaggctg tggagcgcgg gctgcagcga
     4441 aagccatggg tgaagacctc gctggcgcca ggatccaagg tggtgatgga ctattacgac
     4501 cgggccaagc tcacgcccta cctgcagcag cttgggtttg atctggtggg atacggctgc
     4561 accacgtgca tcggcaactc cggtcccctc ccgatggaga tctccgacgc cattcaacgc
     4621 cgccggctcg tcgcctgttc cgtgctctcc ggcaatcgaa acttcgaggg cagaatcaac
     4681 tccgacgtgc gggcaaacta cctgatgtcg cctccattgg tcgtggcatt tgccatcgcc
     4741 ggtcgcatcg acatcgattt gctgcacgag ccgctggggc aggacccgaa gggcgtaccc
     4801 gtctatctgc gcgacatctg gcccacttcg gcagaagtcg aagcaaccct gcagtcctcg
     4861 atcaaatcgg acatgtatcg ccgaagctac ggagcggtct atgccggcga cgaacggtgg
     4921 aatgcgctcg aggtccctgg gggcaaccgc ttcgagtggg cacccacctc gacctatgtg
     4981 cgacgcccac cctatttcga tggaatgtcc aaggagaatc ccacgtcggt gcccgagatc
     5041 cgcggggcgc gggtcctggc tgtgctgggc gacagcgtca cgaccgatca catctctccc
     5101 gccggaagca tcaagaaaga ttctcccgcc ggccgctatc tcctgcagca gggcgtcgct
     5161 ctttcggatt tcaattcgta cgggtcacga cgggggaatc atgaggtgct ggtgcgcggc
     5221 acctttgcca acacccggat ccgaaaccgg ttggcgccgg ggacggaagg cggagtcacg
     5281 acctatctcc ccaccggcga ggtcatgtcg atctacgacg ccgccgtacg ctatcagcat
     5341 gacgggaccc cgctcctggt tcttgccggc aaggagtacg gctccggctc gagccgcgac
     5401 tgggcagcca aaggaccatc gctgcagggt gtccgcgcag tcatcgcgga gagctacgag
     5461 cggatccatc ggtccaatct ggtgggaatg ggaattctgc cgttgcagtt cgttgccggt
     5521 gactcggtgg agtcgttggg actgaccggg cgggaggtgt tcgacatcga aggactgtct
     5581 tctgccgtcc aaactggctt ccaagagggt cgcatgctcg aggtgaccgc ccgggccgaa
     5641 aacggcgccc agaaaaactt ccgggccacc gtccgcatcg atacccctca agaggtgctg
     5701 tactaccagc acgggggcat cctgcagtac gtcctgcggc aacttctctg gggccgacag
     5761 aaggctcgcg cgatcggccc cgggcccgcc accacttcgg agtcccgcac caatgcgaag
     5821 cgagtggagc agggatcatt cgagtcattc ccagccagcg atccgccggc atactagccg
     5881 gtgcggtccc tggtccgggt cactattcac gccttagatt caacaccccg tcaaaatcga
     5941 gatgcgacca aggagaactg aatgccgggt gtacaggccc gtctcaaggc tgagcataaa
     6001 cgtcggtatc tggacctgga ccctacggtc tggtaccagg tagtgccgat ctttcctggg
     6061 gtaacgcaac ggatggtgaa catggcgggt gagcgactgg ctcggctctc gacccctcgc
     6121 ggcttcgtga cgttgcgggc agatcatctg gagtttcgcg ccaccgacgt ggaggcaaag
     6181 agtcacaccc cttgacggcg caggtcaggt cgtcgaagcg gtggtgtggg ttctggggtg
     6241 ttgatcgagc atggcacgca ccttcatggc gagggtgccg ggagtgaatg gcttttgctg
     6301 gaacggcacg ccgggatcga gcagtcctcg ctggaccaca tcctctccgg tataccccga
     6361 catatacagg atcggcagct ccggctcgaa gagcgccaca ttctggccta gctctcggcc
     6421 gcccatctcc ggcatgacca cgtccgagat gatcaggtcg accgttcctg gatgcgcccg
     6481 aatgtagtcg agcgcttcgg atccgttagt cgcttcgagt accatgtatc catgatctcg
     6541 gagtcctctg caagccaggt tccggaccac atcctcgtcc tcgatcacca gaatcgtctc
     6601 ggagcccctc agcggaactg aaagattgtc ggttatcggc tcggtgacta aaccacgggc
     6661 ctccggcagg tagactttga agacgctccc ctgattgacc tcgctgtaca cccacacgaa
     6721 cccgccgctc tgcttgacga tgccgtacac ggtcgacagt cccaatccgg tgccttggcc
     6781 caccggcttg gtggtgaaga acggctcaaa gatccgcgcc tggacgtctc catccatgcc
     6841 gcacccggta tcactgatcg ccaacatcac atagcggccc ggcgggatgt ccacccctcc
     6901 atggcgctcc gcgtacgtct cgtccagaac agcacaacca gtttggatgc cgacccgacc
     6961 gtggccctga atggcatcgc gagcgttgag caccagattg atgaggacct gctccagctg
     7021 gcctcggtcg gcccggatct ggcacgactc gctgctgagg cgcagctcga ggagcttgtc
     7081 ctcacccagc gaatggcgca gcatcttctc catgtcactc acgaccgcat tcagctgcac
     7141 cagctgaggc cggagaaact gctgtcgagt gaaggcgagc aattggcggg tgacatcggc
     7201 ggcccgggtg ccggcgcgga ttacctcttc cacatcggcg cgtcgaggat cgttgagatc
     7261 gaagctccga agcacgaact cgctgaaccc gatcacgccc gtcatcatgt tgttgacttc
     7321 atgggcgacg ccaccggcga gcttccctgc cgcctgcatc cgctccgccc gccgtagctg
     7381 ttcgtctatc cgcttccgct cggtcacatc ccggtagatc ccgcgaacca cagacggctt
     7441 cccgtccttg aaggtgcagc tgagattgcc ctcgaccgtg atcggcggtc cggacttggg
     7501 caccagcatc agctcgacat gatccagccg ctcaccggcc aatacccgcc gcaagactgc
     7561 ggtaaagtgg gagcggctct ccggctgcac gacgtcgatg agctgcatcc tggcgatctc
     7621 gtcctgcgaa taccgggttc cttcctgcca ggccttgttc acatacagga gggtgccatc
     7681 cggcgccgac atgcagacca ggtcgctggc attgtcgaac aggtcccgat agcgctcctc
     7741 actctcccgc aacgcccggt cggcccgttt ccgctcgctc acatcacgcg cattcagcac
     7801 gatgccctga atcgtaggat ccgcgagaag attggagccc actgcttcga gccagaccgg
     7861 cgagccgtcg gctcggcgta agctgaactc caccggaccc gaggactttc cattgctgtt
     7921 ctgaagcaat cctcgaaccg cctcggcatc gctcgcggcc acatatccga gcagcgtggt
     7981 cccgaccagc tggcccgggg catacccgac cagacgctcc gctgaatcac tggcgtagag
     8041 aatggtgctg tcgggagcaa cgatggtcac gaggtcggac gagttctgca ccagcgaacg
     8101 gaatcgccgc tcgctcgccg ccagcaacga ttcggctcga atcttttcct ctcgcgcccg
     8161 ctcccgttcc agggcagcct gaatggcggg gccgatgcgg gcgaggttgc tcttgagcag
     8221 atagtcggtc gcccccgcct tcatgcagcc gaccgcggtt tcctcattca ccgagccggt
     8281 cacgatgagg aacgggatgg ccggcgcgcg ctctctcgtg agggagagtg cggtcatgcc
     8341 gtcgaagcgg ggcagggtat agtcggagag aatcacatcg gggcggaacg cgtccagctc
     8401 ccgcaggaaa ccgtcgcgtg tatccactcg gcgggcaacg aaggggatgc tggcgcgctg
     8461 cagctcgtac tccacgagct cagcgtccat ggcaacgtct tcgagtatga ggatgcgcag
     8521 agcg
//
LOCUS       DASRPQ010001921         1744 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_849193, whole genome shotgun sequence.
ACCESSION   DASRPQ010001921 DASRPQ010000000
VERSION     DASRPQ010001921.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1744
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_849193"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..221)
                     /locus_tag="VFD73_21850"
     CDS             complement(<1..221)
                     /locus_tag="VFD73_21850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI76617.1"
                     /translation="MQARRRYELSDAQWARLEPLLPPEKPDTGRPNHDHRQILNGILW
                     VLNSGAPWRDLPRRYGPVGTVSSRFYRWR"
     gene            669..>1744
                     /locus_tag="VFD73_21855"
     CDS             669..>1744
                     /locus_tag="VFD73_21855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
                     /protein_id="HZI76618.1"
                     /translation="MSEDNSIVRLRQPDEIADPLTALLRSGARRLLEQAIEAEVEAFL
                     ASKKELRLADGRDRVVRHGHGPERVIQTGIGPVEVQRVKVRDRAAGPAAERIRFSSAL
                     LPRWARRTTSLDALLPILYLRGVSAGDFQEALGVLLGQDAPNLSPSVVARLKESWADD
                     YARWHKRDLSARRYVYVWADGVYLQARMEPAAECMLVMIGATPEGKKELLGFQVGVRE
                     SAQSWHELLVDLQARGLRIAPELAVADGALGFWKALDAVFPGTRHQRCWFHKTGNVLN
                     KVAKSIQPAVKQDLREIWMAPDRKAAESALDLFEKKYGAKYSGAVECLTKDRDALLAF
                     YDFPAEHWDHVRTTNPIESVFATVR"
BASE COUNT          324 a          542 c          572 g          306 t
ORIGIN      
        1 tggcgccagc ggtagaaccg gctcgacacg gtacccaccg gcccgtagcg cctcggcagg
       61 tcgcgccacg gcgccccgct gttgagcacc cacaggatgc cgttgaggat ttgccgatgg
      121 tcatggttcg gccgcccggt gtccggcttc tccgggggca acagcggctc cagacgcgcc
      181 cactgcgcgt cgctcaattc ataacgtctc ctggcctgca taccaaagat gtatgcgcaa
      241 tgccggattt ttcaacccgt cgcggtttgc agacacgccc taatatgcct gtgtcacaag
      301 tctggtaagc cgttgaaact aaaaggaaat ttacgccgct tttgggcaag gttggaaacc
      361 aaaaagctat ttgatttcaa ccacttaaca atcaacctca ccatgtttat gacacagtcc
      421 tactaagaac ctgtacgcaa attgaaggcc tgtcggaatg tcgcgcggtc agatgagccg
      481 cgcgggggga ggcatgaggt ctgccgatca ccatatctga cggtccccca ctcttccggt
      541 tccagtgata tggtttcgct ttctgctcgc cgagctatgg cggaaactgg gtgatgacga
      601 ggtgagcaag gtggcgtacc gaggtgggtg acgagcctgc cagaacctcc acgagggagc
      661 gatacgccat gagtgaagat aacagcattg ttcgccttcg ccagcctgac gaaatcgccg
      721 atccgctgac agccctgctg cggtcgggag cgcgccggct gctcgaacaa gccattgagg
      781 ccgaggtgga ggcgttcctg gcctccaaga aggagctgag gctggccgac ggccgggacc
      841 gcgtggtccg gcatggccat gggccggaac gcgtgatcca gaccgggatc gggccggtcg
      901 aggttcagcg ggtcaaggtc cgcgaccggg ctgccggccc ggcagcggag cggatccggt
      961 tcagctcggc gctgctgccg cgctgggcac ggcggaccac cagcctggat gccctgctgc
     1021 cgatcctcta cctgcgcggc gtctcggccg gtgatttcca ggaggcgctg ggtgtcctgc
     1081 tgggccagga cgcacccaac ctgtcgccct cagtcgtggc gcggctgaaa gagagctggg
     1141 cggacgacta cgcgcgctgg cacaagcgtg atctgtcggc ccggcgctac gtctatgtct
     1201 gggccgacgg cgtctacctc caggcccgca tggagcctgc ggccgagtgc atgctggtga
     1261 tgatcggcgc cacgccggag ggcaagaagg agctgctcgg cttccaggtc ggggtccgcg
     1321 aaagcgccca gagctggcac gagctgctgg tcgacctgca ggcgcgcggg ctccggatcg
     1381 cgcccgaact ggcggtggcc gacggcgcgc tggggttctg gaaggcgctc gacgcggtct
     1441 tccccggaac ccggcatcag cgctgctggt ttcacaaaac cggcaatgtt ctcaacaagg
     1501 tggcgaaatc catccagccc gcggtcaagc aggacctgcg ggagatctgg atggcgccgg
     1561 accgcaaggc ggccgagagc gcccttgatc tcttcgagaa gaaatatggc gccaagtatt
     1621 ccggagccgt cgaatgcctg accaaggacc gtgacgccct gctggccttc tatgacttcc
     1681 ccgccgaaca ttgggaccac gtgcggacga caaacccgat cgagagcgtg ttcgccacgg
     1741 tccg
//
LOCUS       DASRPQ010001922         1266 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3695247, whole genome shotgun sequence.
ACCESSION   DASRPQ010001922 DASRPQ010000000
VERSION     DASRPQ010001922.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3695247"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            899..1093
                     /locus_tag="VFD73_21860"
     CDS             899..1093
                     /locus_tag="VFD73_21860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76619.1"
                     /translation="MSMGNSPAEKAIVKQQSERLMAKADADRAARLAGHKSLFRRLLE
                     RLRPHGQQPISDSEPQPSDP"
BASE COUNT          227 a          415 c          386 g          238 t
ORIGIN      
        1 tggtcacaaa cgacgacatc ccgtgccaaa cggctcgtcc acagcctgac tgccaacggt
       61 ctactcagct ggcgagcaga actggcaacg taggccggaa aagctgacag tccgctcatc
      121 aagcttctaa tggcacgcta atggcccgga cggtatgtga ggccccaagc tccgccaggt
      181 ccgacttcga aaatgagcct ctgacctgcg cttctaagat ggagcgggtg acgggaatcg
      241 aacccgcact atcagcttgg gaatcagtgc cgtccgggcc tgtcacgtgg cctgacctgc
      301 ggttcgaggt gtccgcgagt gaccgtgaga gacccctcgt caccgaggtt aatggcccgc
      361 taatggcccg gcgtaccgta gtccggcctg ggctgacggc cgtgtcctgg tcctcccccg
      421 tcctcctcga tagctgccgt ccctcgggcc gcggccgccg tgttaaggct cgcgaagcga
      481 ccgcgtgcgg cttggccttg actcggcgga cccggccgag acaatcgaac agcgaggagg
      541 acgtgcgtga gctaaactca cgtcggccag aggctgggat gcaggacgtc gttctccctg
      601 aaaagcggaa ggtcggcagt tcgaccctgc ccctgaccac cagttttgga ctagtttcta
      661 gcgctctgac cagcgcgaat gccgtctggg tgccttggta tctgcaacgg tcgagtgacc
      721 atgactgccc gtgcctgacc gtggtcggcc gctcgctatc gcacgcggat cgcacgtcgt
      781 gccatggtgc acctgtcttg cgggctgctc catcgggcac gtggcggcac gaccgtctga
      841 cctcgaccac cctgcctgcc ggttgtacga tcaagccacc tgacgcaggg agcagacaat
      901 gtccatgggt aacagccctg ctgaaaaagc aattgtcaag cagcaatccg agcggctcat
      961 ggccaaagct gacgccgacc gggcagcccg cctggcggga cacaaatcgc tcttccggcg
     1021 cctgctcgaa cgcctgcgcc cgcacgggca gcaaccgatc agcgactcgg agccccagcc
     1081 ttctgatccg tagattcctg tgcgagcatc cggacctgtt cagatcagtc cgtgacctcg
     1141 ggctcgtttc tctcggttgt ccaggcgggt ccggatcgtc caggaccgtc tatcgtcggt
     1201 catgtgctgg gccgatgctc cacatctgtc ggcacgtgtc agccgttgtc cagtggcttg
     1261 gcagca
//
LOCUS       DASRPQ010001923         3260 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4290529, whole genome shotgun sequence.
ACCESSION   DASRPQ010001923 DASRPQ010000000
VERSION     DASRPQ010001923.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3260
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4290529"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..217)
                     /locus_tag="VFD73_21865"
     CDS             complement(<1..217)
                     /locus_tag="VFD73_21865"
                     /inference="COORDINATES: protein motif:HMM:NF022643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2834 domain-containing protein"
                     /protein_id="HZI76620.1"
                     /translation="MKPKHWYLGLALLGTILPYSQFVPFVREHGLDLGLFWAQLFANR
                     ISAFFALDVFVSSVVLWVFVLWEGRRNR"
     gene            complement(273..887)
                     /locus_tag="VFD73_21870"
     CDS             complement(273..887)
                     /locus_tag="VFD73_21870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HZI76621.1"
                     /translation="MRYAIRVPRSLVVQPDSLPGVLAFLRAAERLKTVTRSGWTSVGQ
                     QESVAEHTWRLCLMAMVLYGQDDSIDMARLLKMCLIHDLGEAIGGDVPAPAQSAESPK
                     AGQERADLLELTQELPRPLQQEIVSLWDEYEAAGSREAKVAKGLDKLETILQHTQGRN
                     PPDFDYAYNLAYGKKYTAADPVLAALRAILDQETADRAKSPPRS"
     gene            914..1537
                     /locus_tag="VFD73_21875"
     CDS             914..1537
                     /locus_tag="VFD73_21875"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HZI76622.1"
                     /translation="MLANCITLSRLPLLLINVVILYRGSPSMRLAGTALLFLGLMLDT
                     VDGVVARRTGQTSLFGSVLDIAADRAYELVLWVCFSDLGFIPTAIPLIVIARTTLTDA
                     FRSMGVGQGTAPFQQHRTALSRFLVGSAWTRIGYSVTKVTTFCGLALVQALAGIPRFA
                     GWVPQLMPLFQATAWVAVIFCVSRGLPVIISSLRRYWKIYSEAHLET"
     gene            complement(1543..2031)
                     /locus_tag="VFD73_21880"
     CDS             complement(1543..2031)
                     /locus_tag="VFD73_21880"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI76623.1"
                     /translation="MVMAEPTTIREHVAKLLDWEDAHPGLEAAVADLPPDLQGKQPAG
                     LPYSPWQLLEHLRITQHDILDFCVNPDYTELSWPADYWPRSAEPSSASAWADSVRKFK
                     QDRAALQRLARDPTVDLDTRIPHGNGQTYLRELLLAADHTAYHVGQLIVVRRLLGAWP
                     RQ"
     gene            complement(2035..2859)
                     /locus_tag="VFD73_21885"
     CDS             complement(2035..2859)
                     /locus_tag="VFD73_21885"
                     /inference="COORDINATES: protein motif:HMM:NF016816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M55 family metallopeptidase"
                     /protein_id="HZI76624.1"
                     /translation="MRVYISVDMEGVAGVVHEDQTDPIQPRHAGEYNRFRRLMTNETN
                     AAVEGALEAGATRVLVNDSHWLMRNLLIEDLNPAAELLSGGPKRLSMVEGIDTGFELA
                     LFVGYHARAGTQHATIDHTYTSRVYEARLNGEPVGELALNAAMAGVHGVPVALVSGDQ
                     ALAAEARALLGSSVETIVVKEAVGRFAARSLAPAIACERIRSGAAAALRREHRVFTVS
                     SPVRLEVDFVQTGMADMAELVPGSVRTAGRTVSYTGDDYREVFRAWRAMYNLASVE"
     gene            2906..>3260
                     /locus_tag="VFD73_21890"
     CDS             2906..>3260
                     /locus_tag="VFD73_21890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76625.1"
                     /translation="MDARRWAVLVLAGALACGHRAAGTDSNLMKEGRTYTAWLYGSEY
                     RKLWDRFSPEMQQTFGSVADLANFASHAVKNLGVEQGSVSEKVQNTEPFRVYTRSASF
                     EKSRHRMLIEWSLAKN"
BASE COUNT          594 a         1026 c          997 g          643 t
ORIGIN      
        1 cccgattccg ccggccttcc cagagcacga agacccacag taccactgaa gagacgaaga
       61 catccagcgc aaagaacgcg ctgatccggt tggcgaagag ttgtgcccag aacaatccga
      121 gatcgagccc gtgttcccgg acgaatggca cgaactgcga gtagggcaaa atggtcccca
      181 gcagcgccaa ccccaggtac cagtgttttg gtttcatggc cctccggaag gagccgacaa
      241 acgtagctca ctctcgacca cggcgcgctc tctcaacttc taggaggaga cttggcgcga
      301 tccgctgtct cctgatccag gatggctcgg agcgcggcga gaaccgggtc agcagcggtg
      361 tactttttcc cataggcgag attgtaggcg taatcgaagt cgggcgggtt tctgccctgg
      421 gtgtgctgca ggatggtttc cagcttgtcc agccccttcg ctaccttggc ttcgcgtgac
      481 ccggcggcct cgtactcatc ccagaggctc acaatctctt gctgtagtgg tctcggcagc
      541 tcctgggtga gctccagcag atcggcgcgc tcttgacccg ctttcggaga ttcggcgctc
      601 tgggctggtg cgggaacgtc gccaccgatc gcttccccga gatcgtggat caggcacatc
      661 ttgaggaggc gcgccatgtc gatggagtcg tcctggccat acaagaccat ggccatcagg
      721 cacagtcgcc aggtgtgctc cgcgacactt tcctgttgtc caaccgatgt ccacccgctc
      781 cgagtcactg tcttgagtcg ctcggcggca cggagaaacg ccagcacgcc gggaaggcta
      841 tcgggctgca cgacgagaga tctcgggacg cgaatggcgt aacgcaatca ccatcgtttt
      901 cggcggaggg gtcatgctgg ccaactgcat caccttgtcc cgattaccgc tgctgctgat
      961 caatgtcgtg atcctctacc ggggttcacc gtcgatgcgg cttgccggca cagccctgct
     1021 gttcctcggc ctcatgctcg ataccgtcga cggagtggtg gcacgacgca ccggccagac
     1081 cagtctattc ggaagcgttc tggacattgc cgctgaccga gcctacgagc tcgttctctg
     1141 ggtctgcttt tcggatctgg gtttcatccc gactgccatc cccttgatcg tcattgcccg
     1201 aaccaccctg accgacgcgt tccggagcat gggtgtgggc caaggtactg cgccctttca
     1261 gcagcatcga acagcgctca gccgatttct ggtgggctcc gcctggaccc gcatcggcta
     1321 ttcggtcacg aaggtcacga ccttctgcgg actggcgctg gtgcaggcgc tcgccggcat
     1381 cccacggttt gcgggctggg tgccgcaact gatgccgctc tttcaggcga ccgcctgggt
     1441 ggccgtaatt ttttgcgtgt cgcggggact tccggtgatc atcagctcgc tacggcgcta
     1501 ctggaagatc tattcggagg cccacctcga aacctgacgc gactactgcc gcggccaagc
     1561 acccaagaga cgccggacca cgatgagctg ccccacgtgg taagcggtat gatctgccgc
     1621 cagtaggagc tcccgcaaat atgtctgtcc gttgccatgc ggtatccgag tgtccaagtc
     1681 taccgttggg tcgcgagcaa ggcgctgcag cgcggcgcgg tcctgcttga atttccggac
     1741 gctgtcggcc caggcagaag ccgagcttgg ctccgctgag cggggccagt agtcggccgg
     1801 ccacgagagc tcggtgtagt cggggttcac gcagaagtcc aggatgtcgt gctgcgtaat
     1861 ccgaaggtgc tccagcagct gccagggcga gtagggaaga ccggccggct gcttgccctg
     1921 caggtcgggc ggaagatcag cgactgctgc ctcgagaccc ggatgggcat cttcccagtc
     1981 cagcagtttg gcaacgtgct cgcggattgt cgttggctcg gccatgacca ttggctactc
     2041 cacgcttgca aggttgtaca tcgcccgcca ggcacgaaag acctcgcggt agtcgtcacc
     2101 ggtatagctc acggttcgtc ccgcggttcg aaccgatccg gggaccagct ccgccatgtc
     2161 ggccatcccg gtctggacaa agtctacctc gagccgcacc ggcgatgata ccgtgaacac
     2221 ccggtgctcc cgtctgagcg ctgccgcagc tccggagcga atgcgttcgc aggcgatcgc
     2281 cggtgccagg ctcctggcgg caaagcgccc gaccgcctcc ttcaccacga ttgtctccac
     2341 ggagcttccc agaagtgctc gagcttccgc ggccagagcc tggtcgccgc taacgagcgc
     2401 tacaggaacc ccgtgcacac cggccatcgc cgcattcaga gccagctctc caaccggttc
     2461 tccgttcagg cgggcctcgt agactctgct ggtataggtg tgatcgatgg tagcgtgctg
     2521 agtccccgct cgggcgtgat acccgacaaa cagcgccagc tcgaagccgg tgtcgatccc
     2581 ctcgaccatc gatagtcgtt tgggccctcc gctcaacagt tcggccgccg gattgaggtc
     2641 ctcgatcagg aggttccgca tgagccagtg gctatcgttg accaggaccc gagtcgcgcc
     2701 agcctccaac gcgccctcca ctgcggcatt ggtttcgttg gtcatcagac gacgaaacct
     2761 gttatactct cccgcatggc gtggctggat ggggtcggtc tgatcttcgt gcaccactcc
     2821 tgcgaccccc tccatatcaa ctgatatgta aacccgcatg acatctcccg aggaccactc
     2881 gggcgaagaa taccgaggac tccagatgga tgcacgcaga tgggcagtgc tggtgctggc
     2941 aggcgcgttg gcgtgtggcc atcgcgcggc gggaactgac agcaacctaa tgaaagaggg
     3001 ccggacctac accgcgtggt tatacggcag tgagtaccgc aagctgtggg atcgcttctc
     3061 gccggagatg cagcagacgt tcggcagtgt tgcggatctg gcgaattttg ccagccacgc
     3121 ggtgaagaat cttggggtcg agcagggaag cgtgagcgaa aaggtgcaga atacggagcc
     3181 gttccgggtc tacacccgga gtgcctcctt cgagaaatct cgccatcgta tgctcatcga
     3241 atggagcttg gccaagaacg
//
LOCUS       DASRPQ010001924         1874 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2131074, whole genome shotgun sequence.
ACCESSION   DASRPQ010001924 DASRPQ010000000
VERSION     DASRPQ010001924.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2131074"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..603
                     /locus_tag="VFD73_21895"
     CDS             <1..603
                     /locus_tag="VFD73_21895"
                     /inference="COORDINATES: protein motif:HMM:NF014907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76626.1"
                     /translation="AAGLHGANRLGGNSLSDLLVFGKRAGDFAATFAQENSQGDVDAA
                     AVDDAIRCALAPFERSAGGDGAGPYQVQQELQTLMQTLVGIVRNERDMKQALEGIGRL
                     KERARQIGVSGNREYNPGWHTGLDLANLLTVSEAIARAAIERKESRGGHFREDYPEKD
                     SAGASYNIVVRRAEDGEMRLSREPVLEMPAELKKVIAEQK"
     gene            647..1519
                     /locus_tag="VFD73_21900"
     CDS             647..1519
                     /locus_tag="VFD73_21900"
                     /inference="COORDINATES: protein motif:HMM:NF009052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HZI76627.1"
                     /translation="MTAPVTTETMQPDLAETGEVQEQQPPEPKAEASGRVTFRIWRGD
                     RQNGTLVDYTTAISPGMVVLDAIHQIQAEQANDLAVRWNCKAGKCGSCSAEVNGSPKL
                     MCMTRLSELPLDKPVTVEPMRSFPPVKDLVTDVSWNFEVKRRIKLFKPRAPDAPDGTW
                     RMAQSDVDRVQEFRKCIECFLCQDVCHVLRDHHLHDAFIGPRFLVQVAALEMHPLDVE
                     DRVPELRRDHGIAYCNITKCCTKVCPEHITITDNAIIPLKERVVDEFFDPVGKLVRIF
                     SRKWSDPSRQSSDQ"
     gene            1636..>1874
                     /locus_tag="VFD73_21905"
     CDS             1636..>1874
                     /locus_tag="VFD73_21905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76628.1"
                     /translation="MTFQPKPITKEGVPAALQKAERYRVINDPSSAESICLDVLAVEP
                     ENQEALIILLLAITDQFGAAPTEGVRRARQVLPRLR"
BASE COUNT          379 a          554 c          624 g          317 t
ORIGIN      
        1 gcggccggcc tccacggagc caaccggctg ggcggcaact cgctctctga tctgctggtc
       61 ttcggcaagc gggccggtga ttttgccgcc acctttgcac aggagaacag ccaaggcgac
      121 gtcgatgccg cggcagtcga cgatgccatc cggtgtgcgc tggcgccctt cgaacggagc
      181 gcgggcggtg acggggccgg tccctaccag gtgcagcagg agcttcagac gctgatgcag
      241 acgctggtcg gcatcgtccg aaatgagagg gatatgaaac aagcgctgga gggcatcggc
      301 cggctgaagg agcgggcccg ccaaatcgga gtcagcggca accgggagta caatccagga
      361 tggcacaccg ggctcgatct ggccaatctg ctcacggtgt ccgaggccat cgctcgggca
      421 gcaattgagc gaaaggagag tcggggcgga cactttcggg aggattatcc cgagaaggac
      481 tcggccggag cgagctataa cattgtggtc cggagggccg aagatggaga gatgcggctc
      541 tcgcgcgagc cggttctgga aatgccggcc gaattgaaga aggtgatcgc cgagcagaag
      601 tgaacgtcgc ttcgctctgg atgacagcgg aaggagggtc gacctcatga cggctccggt
      661 cacaaccgaa acgatgcagc ccgacctcgc cgagaccggc gaggttcagg agcagcagcc
      721 gccggagccc aaggccgagg ccagcgggcg cgtcaccttt cggatctggc ggggcgaccg
      781 ccagaacggg accctggtcg attacacgac ggccatctcc cccggcatgg tcgtgctcga
      841 cgcgatccat cagatccagg ccgagcaggc caacgatctt gcggtgcgct ggaactgtaa
      901 ggcgggaaaa tgcgggtcgt gctcagccga agtgaacggg tcgcccaagc tcatgtgcat
      961 gactcgtctg agtgagctgc cgctggacaa accggtgacg gtcgagccga tgcgctcgtt
     1021 cccgccggtc aaggacctgg tcaccgacgt atcctggaac ttcgaggtga agcgccggat
     1081 caagctgttc aagccacggg cacctgatgc tccggacggc acctggcgca tggctcagtc
     1141 cgatgtcgac cgggtgcagg agttccggaa gtgtatcgag tgcttccttt gtcaggatgt
     1201 ttgtcatgtg ctgagggacc atcatctgca cgacgccttc atcggccctc gctttctggt
     1261 tcaggtcgcg gcactggaga tgcacccgct cgacgtggaa gatcgagtac cggagctccg
     1321 gcgggaccat gggatcgcct actgcaacat caccaaatgc tgcaccaagg tctgcccgga
     1381 gcacatcacg atcacggaca acgccatcat cccgctcaag gagcgggtgg tggacgagtt
     1441 cttcgatccg gtggggaagc tggtgaggat ttttagcagg aagtggtcag accccagtcg
     1501 tcagtcgtca gaccagtgag tgtccgatgg ggtcagggtc gtcgctaggt ttccagcgac
     1561 tcagctgagg ctcccaacgt tccatcgaca actgacgact gaggactgac gactgacgac
     1621 tgacgactga cgactatgac cttccaaccc aaacccatca ccaaagaagg cgtccccgcc
     1681 gcgctgcaga aagcggagcg gtaccgggtg atcaacgacc ccagttccgc cgagagcatc
     1741 tgtctcgatg tcctggctgt ggagccggag aatcaggagg cgctgatcat tcttctcctg
     1801 gccatcaccg accagttcgg ggcggcgcca accgaggggg tgcgtcgggc gcgacaggtg
     1861 ttgcctcgcc tacg
//
LOCUS       DASRPQ010001925         1339 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_849659, whole genome shotgun sequence.
ACCESSION   DASRPQ010001925 DASRPQ010000000
VERSION     DASRPQ010001925.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1339
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_849659"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            700..1128
                     /locus_tag="VFD73_21910"
     CDS             700..1128
                     /locus_tag="VFD73_21910"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HZI76629.1"
                     /translation="MSVEENKMLVRRQFEEIWNGGNWATADELYAPDYVNHDPYNPDQ
                     GTGPEGFKQRVGGYRTVLGNFDLRIERQIGEGDWVETHWSLRGTHDGELEGTAPTGKS
                     VYVEGQLLSHIVDGKFVEEWVHWDTLGALRQIGAVPPPKG"
BASE COUNT          247 a          419 c          432 g          241 t
ORIGIN      
        1 gttgctcttc gtcgccagcg ctatccgcgc tagtgcggcc actcccatct atttcggcat
       61 ctgcgccttc tggcgcctcg gccacaggct cgacttcgtc ccgggaagga ccgccaccga
      121 gcacctcggg ttgctcgttc acggtcggca tcctacgcgg tgctgccacg cctatgcgcg
      181 gctccgcgac cggcaagctc gcgtagagct ccggccgaag aagcggagag actggttgcg
      241 agcggctata agtcatttga tccgtagatc aatgcgatgc gtccagcctg tgcgctggaa
      301 tccgtatccg caggtcatca tccgaccggg agtccgatat ttgcgcctga gtccggtgtc
      361 gtcccaccag tccgtgagaa agttgtgaga gatcccgcac cggtgcaggg gatgccccct
      421 gacggcgcag gacccccgga caccgaacgg gccatctccg ggaccctggc cttgtagttc
      481 gctccgatgg tcccgcgctg gctgcggcgc acccatccct gccaggttgt acacgcgtgg
      541 tgtctcacat tgcgatcagg tgtgcgcttg aggcaccttc tcgctgggtc ccgcgcgagc
      601 gtaacgtgtg ctgaacagag ctgagcagca agggttgcct gcatgttcgt ccctaccggg
      661 cacgcctggg ctccggtggg gtgagagggg gaacggccga tgtcggtcga agagaacaag
      721 atgctggtcc gccgccagtt cgaggaaatc tggaacggag gaaactgggc caccgcagac
      781 gagctgtacg cgccagacta tgtgaaccac gatccgtaca acccagacca gggaaccggc
      841 ccagagggat tcaagcagcg agtaggcggc tatcgcaccg tcctgggtaa cttcgatctg
      901 aggatcgaac gccaaatcgg ggagggtgat tgggtcgaaa cccactggtc gctgcgcggg
      961 acccacgacg gagagctgga gggcaccgcg cccacgggca agtcggtcta cgtcgagggg
     1021 cagctcctca gccacatcgt cgatggcaag ttcgtggaag agtgggtcca ctgggatacg
     1081 ctcggagcac tccggcagat cggggcggtc ccacccccca aggggtaacc cccagaacta
     1141 gcctcaggcc aagaccaaga ttccgggccg ggctcatctc ggagaagaag gccctgagct
     1201 gcgcttaccg tggcatgccc ggagagactc gaatcctcca gtcttcagat ccgtagttcc
     1261 ctgtgcgggc atccggactc gttcagattc gtccatgacc tcgggcgcgt ccgtggccgt
     1321 tgttcatatg agtgcggag
//
LOCUS       DASRPQ010001926         1300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2411072, whole genome shotgun sequence.
ACCESSION   DASRPQ010001926 DASRPQ010000000
VERSION     DASRPQ010001926.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2411072"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1003..1091)
                     /locus_tag="VFD73_21915"
     tRNA            complement(1003..1091)
                     /locus_tag="VFD73_21915"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1053..1055),aa:Ser,seq:gct)
BASE COUNT          224 a          414 c          428 g          234 t
ORIGIN      
        1 ttgtcatccc aggcgcagtg atgacgttgc gcgcgcccgg atctcatcgg ccctcgtccc
       61 ctgcgctccg ccaagttaac agggatgcac cgcgtacggc cgaaccgcta ggttcagccc
      121 tctggccaca cctaatcgaa ggatcgaccg gtatggatga tcttccccag agatttgtga
      181 tccgggagag cagccaccgc agtcataacc cgttcaccag cgaaaagctg gccacccttg
      241 gggcgggcgt tgtatctgtc acccggaacc agcgtgctcg accttgcctg cgggtccggg
      301 gagatgctgt gcacctgggc gcgcgaccat cggctgaccg gcactggggt tgatatcagt
      361 accgcgttca ccggagctgc gcgagcacgt gccatcgagc tggacgtcgc cgaccgggtc
      421 acattcatcc atggggacgc tgcgggctac gtcgctgaac ggccggtggg tgtcgcttca
      481 tgcatcggcg caacatggat cgggacggcg tggccgggac ggttgagctg ctgcggcgca
      541 gcctcagccc gggaggcatc atgctggtcg gcgaaccgta ctggcgtcgc gagcctcccg
      601 atcaggccac cctcgaaggt tgctacggga ccgggaagga ggactggctc ccgctgccgg
      661 agctgatcga gtctttcggc ttgctcggct gtgatgttgt cgagatggtg ctagcagatc
      721 aagacagctg ggaccgttac gccgcagcgt catggctcaa catccgccgc tggctcgatg
      781 ccaatcctca tgacgagctg accgatgaca tccgcgctga actcgcatcc agtccggcgc
      841 ggtacgcccg gtaccggcgc gagtacctcg gctggggtgt cttcgcattt gatgaaccgc
      901 tgagaacctg gacttgcctc atgctgagcg agacggcaac gcgaatcgcg accttgggtc
      961 gcctagtggg tcaggccctg tccctgcgtg ttctgcgagc tgcggaggat cggggatttg
     1021 aaccccggag ggtggttaca cccaaccgca ttagcagtgc ggcgccatag accggactag
     1081 gcgaatcctc cagccgcacg cgtggtgcgg tgggccatag cgtaccggca ctagcccggc
     1141 ccgggcaaag caatccgggc cgaacgcggt cagcgcacct cgatgatctc gtagtcgccg
     1201 cgcaggtagg cctctcgcat ctgccgcttg gagaacttgc ccacgctggt cttgggaacc
     1261 tcggcgacga agcaccagcg ctcggggagc tgccagcgcg
//
LOCUS       DASRPQ010001927         1384 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3695935, whole genome shotgun sequence.
ACCESSION   DASRPQ010001927 DASRPQ010000000
VERSION     DASRPQ010001927.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1384
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3695935"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            247..1224
                     /locus_tag="VFD73_21920"
     CDS             247..1224
                     /locus_tag="VFD73_21920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76630.1"
                     /translation="MPIDMPAQSDELLAIQSKVIACRQGAETGVNPRSMRSRMGSGRW
                     QRLQRGVYAVHSGEPARETMLWAALLRAGPGAVLSHQTAAERHGLMDGPSSLIAITVP
                     AARHPAQLKKITGLVIHRSDAILRTTHPAMLPPCTRIEDTVLDLIQIAPNFDDAYTWI
                     CRAIGRRLTTADRIRHAMEARKKMRWRRELTLALADAGEGALSLLEYRYVHRVERPHG
                     LPAARRQARIRQRTGNRYLDNLYEGYGVCSELDGTAAHPADEQWRDKRRDNANAAKGI
                     VTLRFGLGDLGDRRCDTAATVAAVLRLRGWPGVPHPCSRPGCPVSGMTS"
BASE COUNT          248 a          434 c          467 g          235 t
ORIGIN      
        1 agggtgcgcg gccgcatccg gacggcgagc ggcgcggccg cgctcgccac cgcctcttcc
       61 gcctcgtcaa acaggctctc ggactgcgcg tccacctcgc caccccctct cacggacctg
      121 gccatcctca gaccttatcc cggctcgcgg agctagttat ccacagaaag gcgacatgga
      181 tccgagttat ccacaggttc gaggcgcggg ctgcagagtg cttggttgct gtgcaggctg
      241 accttcatgc cgatcgacat gcctgcgcaa tccgatgaac tgctggcgat ccagagtaag
      301 gtcattgcct gccgtcaggg cgccgagact ggcgtcaacc cgcgttcgat gcgcagccgg
      361 atgggcagcg gtcgatggca acggctccaa cggggcgttt atgcggtcca ttcaggtgaa
      421 cctgcacggg agacgatgct atgggcggcc ctgctgcggg cgggtcccgg cgcggtcctg
      481 agccaccaga cggcagccga gcggcacggc ctgatggatg ggccaagctc actcatcgcg
      541 atcaccgtcc cggcagccag gcatccggcg caactgaaga agatcactgg cctcgtcatc
      601 cacaggtcgg acgcaatcct gcggaccaca catccagcca tgctgccgcc gtgcacccgg
      661 atcgaggaca ccgtgctcga cttgatccag atcgcgccga actttgatga cgcctacaca
      721 tggatctgcc gggctatcgg ccgccggctc accaccgccg accggatacg gcacgccatg
      781 gaggcccgta agaagatgcg atggcgtagg gaacttactc tggcgcttgc cgatgccggg
      841 gagggagcct tgtcgctgct cgaataccgc tacgtgcatc gcgtggaacg cccgcatggg
      901 cttcctgccg ctcgtcggca ggccaggatc aggcagcgca ccggcaatag gtacctcgac
      961 aacctctacg agggatacgg ggtttgctcg gagctggacg ggaccgcggc gcatcccgcc
     1021 gatgagcagt ggcgtgacaa gcgccgggac aacgccaacg cggccaaggg catcgtcaca
     1081 ctcaggttcg gccttggaga cctgggtgat cgtcgatgcg atacggcagc caccgttgcg
     1141 gcagtactac gcctgcgcgg ctggccaggc gtccctcacc cctgctcccg ccctggatgc
     1201 cctgtctcag gtatgacctc atgatcatgg atagtttcgg tcgctattcg gtcgaaacta
     1261 tccatgatca tgaaacccag cggagggggc gaagcggaag tggggggtgg tggctaggaa
     1321 atgggagcgg ctggtggggt ggttggggat gcagaggtgg ggggtgtggg agtgggggtg
     1381 gcgt
//
LOCUS       DASRPQ010001928         1114 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1497826, whole genome shotgun sequence.
ACCESSION   DASRPQ010001928 DASRPQ010000000
VERSION     DASRPQ010001928.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1497826"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(163..>1114)
                     /locus_tag="VFD73_21925"
     CDS             complement(163..>1114)
                     /locus_tag="VFD73_21925"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI76631.1"
                     /translation="TYASGWTSASIAAHRSLSLPLQLVGEVHRWSTRYDDQVLRILGI
                     GRRKLLEPLCSGVVGELPPPTQEARRALWSPPQLAGENADLVIVEIHRWMASRFKRLG
                     WRIVPSAVRWEGDLAVVPPARPCASLRDDLRKVRQHGYVLTQSQDPEDWTFFYQEMVR
                     PHAHGRYGPAAWHPSPRFIKQLARVATLHFVTRNGERVAGLCSVARGETVWFPLSGIL
                     GGDLLLLHQGAGAAATALTLDWARARGFRRVDNGRTSPFLEQGLARYKRKWGLLPVPD
                     PLAHLAAIAVRSPLAGKAFARNPVLVEEGNALITYSGETG"
BASE COUNT          199 a          377 c          361 g          177 t
ORIGIN      
        1 catgccgcgg gttccacccc gaccgctccg ccgaggtgaa ccagtggtgc aggtgaaacc
       61 cacgacgcgc gagccgatcc cattgtcgag gttcgatccg atcggctgcg cctactgtga
      121 ccacctgatc tcgagccaga cctgccgacg cccgtagcgc ggtcatccgg tctcgcctga
      181 gtaagtgatc aaggcgttcc cctcctccac cagcaccgga ttgcgggcga acgcttttcc
      241 tgccagaggg gaacgcaccg cgattgccgc gaggtgcgcc agcgggtcgg ggaccggcag
      301 cagtccccat ttgcgcttgt agcgtgcgag gccctgctcg aggaagggag aggtgcggcc
      361 gttatcgacc cgccgaaagc cccgcgctcg ggcccagtcc agcgtaagtg cggtggcagc
      421 tgcgccggcc ccctgatgga gcagtaggag atctcccccg agaattccgg acagtggaaa
      481 ccacacagtc tcccctcgcg ccacagagca caatccggcg actcgctcgc cgtttcgggt
      541 aacgaaatga agggtcgcca cccgggcgag ctgcttgatg aaacgcgggc tgggatgcca
      601 tgcagccggt ccatagcgac cgtgcgcgtg gggtcgaacc atttcctggt agaaaaacgt
      661 ccagtcctca gggtcctgac tctgggtcag cacatagccg tgctgccgca ctttccggag
      721 gtcgtctcgg agacttgcac acggccgggc tggggggacc accgccagat cgccttccca
      781 gcgcacggcg ctcggcacga tccgccagcc cagccgcttg aagcgcgatg ccatccagcg
      841 atggatctcc acgatgacca gatcggcgtt ctcaccggcg agctgaggcg ggctccagag
      901 cgcccgtcgc gcctcctggg tcgggggcgg aagctcgccg acaactccgc tgcagagtgg
      961 ctccagcagc ttccgtcggc cgatgcccag aatccgcagc acctgatcat catatcgggt
     1021 gctccagcgg tggacttcgc ccacgagttg cagcggaagg gacaagctcc ggtgcgcggc
     1081 aatcgaggcc gaggtccagc ctgaggcata ggtg
//
LOCUS       DASRPQ010001929         3052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2767845, whole genome shotgun sequence.
ACCESSION   DASRPQ010001929 DASRPQ010000000
VERSION     DASRPQ010001929.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3052
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2767845"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(381..800)
                     /locus_tag="VFD73_21930"
     CDS             complement(381..800)
                     /locus_tag="VFD73_21930"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HZI76632.1"
                     /translation="MATRASWRLAEALSRAEHRVSRRISAALRSEGMSLEQWRVLSLL
                     SDGAGHTMSDIARDVMLPAATLTRVIDRLVEVNLVYRRGDLGDRRRVLVFVSPRGRSL
                     HRKLAGTVDREEAALMAGIRDDDAAMLGDLLKRLAEP"
     gene            937..2022
                     /locus_tag="VFD73_21935"
     CDS             937..2022
                     /locus_tag="VFD73_21935"
                     /inference="COORDINATES: protein motif:HMM:NF024825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HZI76633.1"
                     /translation="MTIPTTEVLQIALVIPLQGPAGIFGPSCEACAQLAVDEINSGTG
                     VLGRELHLIPVDGGAAPHQVANELDALISAGAVDAVTGWHISAVREVVAPCITGRAPY
                     VYTALYEGGERTPGVFLTGETPECQLLPTMRWMAMELGVRQWCIIGDNYVWPWGSAKA
                     ARNYAERCGARILDEIYVELGTAKFTNALRRIERSGAQGVLMFLVGNDAVRFNRAFAA
                     AGLDERMLRLTPLMEENMLLASGAAATKGIYTASGFFESAATAEGLDFVGRYTTRYGP
                     EAPVLNSMGESCYEGVRLLAALIQRAGGLDVPGLCSVADTVGYGGPRGEVHLQECHLD
                     QRIYLARADDLQFDVITSFRRAQQDER"
     gene            2269..>3052
                     /locus_tag="VFD73_21940"
     CDS             2269..>3052
                     /locus_tag="VFD73_21940"
                     /inference="COORDINATES: protein motif:HMM:NF005757.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HZI76634.1"
                     /translation="MASRTDYEIFDLGDFTLSGGATLRSARLAYKTYGTLSENRDNAI
                     VYPTWYSGRHWENEWLIGGGMTLDPARYFVIVPNMLGNGLSSSPSNTPPPYNGPRFPD
                     VRVQDNVHAQHKLVTEHFGIERLVAVTGWSMGAGQTYQWAVSYPEMVPRILPFCGSAR
                     TSRHNIVFLEGVKAALMADAAWKDGWYDQQPWRGLRAAARVYAGWGFSQAFYWDELYE
                     QLGYTSLEDFLVGFWEGFFLDERDANNLLTMLWTWQHGDIGLT"
BASE COUNT          578 a          998 c          953 g          523 t
ORIGIN      
        1 cagacggcga ccgcccccgg agaaagtctc ttcgagttta agtgtgattt tgtcacgtcc
       61 tggtgacact gcgtgagaca caggtgctgt acccacggct gcgctgttcg gcgagggctt
      121 actgggtgct gggccaggac ttctgcgcca ctggcgcacc cgggtagcaa taagcaccgc
      181 ctaggccggg cggcgcccgc cgccggtcac accgcgcccc gtgcgcattc agcaagccgg
      241 gcggcaccac gacccccgct agcctcgaag gtcccggtga gagccgactg gggacaccag
      301 atgggacggg cgcatcctcg tcctgcctca acggcacccg ttacccgcga tgggtgcagg
      361 cggtcagatt gctcgcgcgg ttacggctcg gcgagccgtt tgagcagatc accgagcatc
      421 gctgcgtcat catcgcggat cccggccata agcgccgcct cctcgcggtc gacggtgccg
      481 gcgagcttgc ggtgcagaga ccgaccgcgg ggcgaaacaa agaccagcac gcgccgacgg
      541 tctccgaggt ccccccggcg gtagaccagg ttgacctcca ccagccggtc gatgacccgg
      601 gtcaaggttg cggcgggcaa catcacgtca cgagcgatgt cgctcatcgt gtgcccggca
      661 ccgtcagaga gaagggacag gactcgccac tgctcaagcg acatgccctc agaccgcagc
      721 gcggcagaga tgcgccgaga cacccgatgc tctgcacggc tgagggcttc agcaagccgc
      781 cagctagctc gtgtggccat tgcacctcgc ccgacctcag gactagtgtc agttccagga
      841 tagatccttg cagccggaaa tatccggagg cattcgagat acgcaggtag gtgccatccc
      901 atgggaacag catcgccaat acttacgcgt ccgtggatga caataccaac aactgaagtc
      961 ctgcagatcg ccctggtcat tccccttcag ggaccggccg ggatattcgg accgtcgtgt
     1021 gaggcctgcg cacagctcgc ggttgatgag atcaacagcg ggacaggcgt acttggccgg
     1081 gaactgcacc tgatccccgt ggacggcggc gccgcccctc atcaggtggc aaatgagctc
     1141 gatgctctta tctccgccgg cgctgtcgat gccgtaacgg gctggcacat ctccgccgtt
     1201 cgggaggtag tcgctccgtg catcactggc cgtgctccct acgtgtacac cgcgctgtac
     1261 gagggagggg aacggacccc gggcgtgttc ttgaccggcg aaactccgga atgccagctc
     1321 ctgccgacga tgcgctggat ggccatggaa ctgggggttc gccaatggtg catcatcgga
     1381 gacaactacg tctggccgtg ggggtcggcc aaggcggccc gtaactacgc ggagcggtgc
     1441 ggggcacgga tcttggatga aatctatgtc gaactgggca cagcaaagtt cactaatgca
     1501 ctgcggagaa tcgagaggag cggtgcacaa ggggtcctga tgttcctcgt tggcaacgac
     1561 gccgtccggt tcaaccgggc gttcgctgcc gccgggctcg acgagcggat gctcaggctt
     1621 acgcccctca tggaagagaa catgctgctg gcaagcggcg cggccgccac aaagggcatc
     1681 tacacagcct ccggcttctt cgaatcggcg gcaaccgcgg aaggcctcga cttcgtcggc
     1741 cgctatacca cccgctatgg cccggaagca cccgtgctga acagcatggg cgaatcttgc
     1801 tacgagggcg ttcgtctgct tgccgcgctc atccagcgag ccggcgggct tgacgtgccg
     1861 ggtctgtgct cggtggccga cacagtggga tacggcggac ctcgcggtga ggtgcatctg
     1921 caagaatgtc acctcgacca gcggatatac ctggccagag ccgacgatct ccagtttgac
     1981 gttattacca gcttccggcg cgcccagcag gatgagaggt gacaccatct gcctcattca
     2041 aaggttcacg ttatgcaaaa gcctgctatg gctgctggtc gtgccacgtg caccggccgc
     2101 tcgcgcaggc cccggagacc agcactcgtg agccgatttt gcataacact ccatgacccc
     2161 aggccatggt atttcttcgt gtccgtaagc tcgtcgccga ttgccggtaa aaacccgtgg
     2221 ccgacgccga cgccgattcg tcctccgcat gagaggtgaa gtcctgacat ggcctcccgc
     2281 accgactacg agattttcga cctaggcgac ttcacgctca gcggcggcgc aacgcttcgc
     2341 agcgcccggc ttgcgtacaa aacctacggg acgctcagcg agaaccgcga caacgcaatc
     2401 gtgtacccga cctggtactc cggacgccac tgggaaaacg aatggctcat cggcggcggc
     2461 atgacgctcg acccggcgcg ctacttcgtc atcgtcccga acatgctcgg aaacggactg
     2521 tcatcgtcgc ccagcaacac gccaccgccg tacaacggcc cgcgcttccc cgatgtccga
     2581 gtccaggaca acgtgcacgc ccagcacaag ctcgtgaccg agcatttcgg gatcgagcgg
     2641 ctcgtcgccg tgaccggctg gtccatgggc gccggccaga cctaccagtg ggcggtcagc
     2701 tatccggaga tggtaccgcg catcctgccg ttctgcggct cggcaaggac cagccggcac
     2761 aacatcgtct tcctcgaagg cgtcaaagca gcactcatgg ccgacgcggc gtggaaggac
     2821 ggctggtatg accagcagcc ctggcgcgga ctgcgcgctg ccgcgcgcgt ctacgccgga
     2881 tggggcttct cgcaggcctt ctactgggat gaactctacg agcagctagg ctacacgtca
     2941 ctcgaagact tcctcgtggg cttctgggaa ggcttcttcc tcgacgagcg cgacgccaac
     3001 aaccttctca cgatgctatg gacctggcag cacggggaca tcggcctgac gg
//
LOCUS       DASRPQ010001930         1055 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3041218, whole genome shotgun sequence.
ACCESSION   DASRPQ010001930 DASRPQ010000000
VERSION     DASRPQ010001930.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3041218"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(21..191)
                     /locus_tag="VFD73_21945"
     CDS             complement(21..191)
                     /locus_tag="VFD73_21945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76635.1"
                     /translation="MISALVMFLGRNGVGRGFYGKPVQLGLIPSERMSEQAKDTFWIG
                     QMNGVVEWAATR"
     gene            complement(612..>1055)
                     /locus_tag="VFD73_21950"
     CDS             complement(612..>1055)
                     /locus_tag="VFD73_21950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76636.1"
                     /translation="DGAHSWLYVPEPVGLPGIEGYAAELGLETELPAAIAQYRGQWIE
                     YGIVERAYALQCRDDFAAIVSRYGHTAVGPKQYTASAFLAGVLGVLSKRGTVLYHLGP
                     ATGRWKYNGTISWWTVAPAPDWESNRLSWSDSGQDMSYVPGAADQ"
BASE COUNT          191 a          357 c          284 g          223 t
ORIGIN      
        1 tcggttacct ggcgtaaagc tcatcgtgta gcagcccact cgaccacgcc gttcatctgc
       61 ccgatccaga acgtatcctt ggcctgctct gacatacgct cggacgggat gaggcccaac
      121 tggacaggtt tgccgtagaa tcccctgccg accccattcc taccaaggaa catgactagt
      181 gcggagatca tcagaccgcc tcctggccga tcttgtgttt ccgcataact ccggtctacg
      241 agccgtccca gcaactcgcc catcgcagca cggtctttca cataaccaaa gtcccacggc
      301 ggctggcctg tccgggcggc aatctcgggc ggagatctcg cgcccggcgt attaggaagt
      361 cccaccctgc tgcttccaga gcttcccatt cgagttctgt ccggccatac atttcggcag
      421 acacttcagc cctccatttg cgctcagctg tccggtcctg ctcggcggat gaatcttctc
      481 taacccgact taggtcaagt ttcggccttg attgaaggcc gccaggaatc tctcaccacg
      541 agaggctgtc atcgcatcta ctttcaatcc ttacaggccc acccgaggcg cgggcggaca
      601 ccacggttca gctactggtc tgccgcgcct gggacgtagg acatgtcctg gccgctgtcg
      661 gaccacgata ggcggttcga ctcccaatcc ggcgcaggcg caactgtcca ccagctgatc
      721 gtgccgttgt acttccagcg tccggtcgcg ggacccagat ggtataggac ggttccgcgt
      781 ttgctgagca cgccaagtac accggcgagg aaggctgatg cggtgtactg cttgggcccg
      841 actgctgtat gcccgtatcg gctcacgatg gctgcgaaat cgtcccggca ctgcagcgcg
      901 tacgctcgct ccacaatgcc gtactcgatc cactgtcccc ggtattgcgc gatcgccgca
      961 ggcagttctg tctccaagcc gagttctgcc gcgtagcctt cgatgccggg caacccgact
     1021 ggttccggca catatagcca gctatgcgca ccgtc
//
LOCUS       DASRPQ010001931         1047 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3988436, whole genome shotgun sequence.
ACCESSION   DASRPQ010001931 DASRPQ010000000
VERSION     DASRPQ010001931.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3988436"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(209..625)
                     /locus_tag="VFD73_21955"
     CDS             complement(209..625)
                     /locus_tag="VFD73_21955"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HZI76637.1"
                     /translation="MDVDDLTVKAIRDGAVCMLILAGDLDLLTAGEFLQHAARVLDDR
                     IERLVLDLAGVTFLDCAGIRALAIATCFAPSGCPVIIRSLSPPARRIITVLGTDDIES
                     LRRLTAGLHSQNGLRDGVTSEQGLVPVTWADLPLDA"
BASE COUNT          208 a          322 c          345 g          172 t
ORIGIN      
        1 caaggatctg gatacgattc agcgctccgt acagagcagc ctgatcgaga tcggcgatga
       61 gcgttgtgta cacgccgtcg gatttgatca tgaatccctc gaacgcctgg cggacaactg
      121 cgctcagacc accccagatg agaatccagt agcggtgggg gtgtacgttc gcctcccttc
      181 cgtgattctg gcaggtccgg attgacgctt acgcgtcaag gggcaggtcg gcccacgtca
      241 ccgggacaag tccctgctca ctggtcaccc catcccgcag tccgttctgg gagtgcaggc
      301 ccgcagtgag tctccggagg ctctctatgt catcagtgcc cagcaccgtg atgatccggc
      361 gcgccggagg actgagtgag cggatgatga ccgggcagcc gctgggcgca aagcaggtag
      421 cgatggccag cgcccgtatt ccggcgcagt ccaggaacgt cacgccggcc aggtctagga
      481 caagccgctc gatccggtca tcgaggaccc gtgccgcatg ttgcaggaac tcgccagccg
      541 tcagaaggtc taggtcgccg gccaggatga gcatgcagac cgctccatcg cggatggcct
      601 tgaccgtaag atcatcaacg tccattgctt ctcaatcggc tcgcggggtc tagacgacac
      661 caactgaggt cagctagcaa gtcaaaggta aagccccggt cgtccttgga caaggcggcg
      721 tggcctggta gttggcgcca agacctggcg cggtccgttg tcggcccgcc gggctggaag
      781 cctgaaggcg cctgatgatt aggggctacg ggctagggcg acacgaaggc atgcgaacgc
      841 cgccagaagg ccgaggcacg cgaggccgcg atggaagcga agcaggcagg cacgtcaggc
      901 catggccaca gtgggccagc cgatgcacat cccttgacgt gcagggcttg ccggagcagc
      961 atgacggaag ccgcagatcc caattctctc attgcgggaa ctctgcgtgc ccggggttgg
     1021 cgacccccac gggagccacg ggaccca
//
LOCUS       DASRPQ010001932         1629 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1818969, whole genome shotgun sequence.
ACCESSION   DASRPQ010001932 DASRPQ010000000
VERSION     DASRPQ010001932.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1818969"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..330)
                     /locus_tag="VFD73_21960"
     CDS             complement(<1..330)
                     /locus_tag="VFD73_21960"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HZI76638.1"
                     /translation="MTQLRDRFQSTLADRYAVEREVGRGGMATVYLAQDRKHDRQVAL
                     KLLHPDLAASLGPDRFLREIQIAARLQHPHILPLYDSGRTGGQSDGRPDFLYYVMPFV
                     EGESLRDR"
     gene            complement(548..988)
                     /locus_tag="VFD73_21965"
     CDS             complement(548..988)
                     /locus_tag="VFD73_21965"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZI76639.1"
                     /translation="MTRVVLLGVLAVLAAVPAYSQSAAASNQAVLKEYRALDQAQFKK
                     DRATMERLMASDYSYTHSNGAVNDKAADIKETMSEDIKWTDTKSDDVKVRMYGNVAVV
                     TGEVTLTGTAKNYVPGPRRFTEIWVKRGGRWQNVGGQTTLVPAK"
     gene            complement(1184..>1629)
                     /locus_tag="VFD73_21970"
     CDS             complement(1184..>1629)
                     /locus_tag="VFD73_21970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76640.1"
                     /translation="PAIDQGWKTLELHPNSLWPGFFMGLALVEQEQIEEAIGHFQNAL
                     TMSGGKSFIHSALGHAYAVGGARDLAVQALEELEGESVRQYTPAYDRALIYVGLGDKD
                     RSFEWLERAYEERSSWMSYLNVEPRLDPLRSDSRFSSLLRNVGLE"
BASE COUNT          319 a          509 c          486 g          315 t
ORIGIN      
        1 ccggtcgcgc agcgattcgc cttcgacgaa cggcatgacg taatagagga aatcgggccg
       61 gccgtcggat tgcccgccgg ttcgccccga gtcatacaac ggcagaatat gcgggtgctg
      121 cagccgtgct gcgatctgaa tctctcggag aaaccgatcg ggaccgagac tcgcggccaa
      181 gtccgggtgc aacagcttga gagccacctg gcggtcgtgc ttccgatcct gcgccagata
      241 cacggtcgcc atccctccac gaccgacctc ccgctcaacg gcgtaccggt ccgccagagt
      301 cgattgaaac cggtcgcgaa gctgggtcat agtactcgat catgaaggaa gtgcaggtcg
      361 gtgcccggat ggctgtctga ccagcggtag tccaatgtac ggccaaccct acggccgagc
      421 caggcgtggc acctggcccg aacggcagcc cataccatgg cgtcacgttc cggctcaggt
      481 gccggaacgg taacgctagg atgcttaaga gtctggtgaa cgcaacttcg tgcgggctct
      541 ccgcgaacta tttcgcgggc accaaggtgg tctggcctcc gacgttctgc cagcgtccgc
      601 cgcgcttgac ccagatctca gtgaaccggc gaggtccggg aacgtagttc ttggccgtac
      661 cggtcaacgt cacctctcca gtgacgacgg cgacattgcc gtacattctc accttcacat
      721 catcactctt ggtgtcggtc cacttgatgt cctccgacat cgtttccttg atatcagcgg
      781 ccttgtcgtt caccgcgcca tttgagtggg tgtaggaata gtcgctggcc atcagccgct
      841 ccatggtcgc tcggtctttc ttgaactgcg cctggtcgag cgcgcgatac tccttgagta
      901 cggcttgatt ggatgcagct gcggattggg agtaggcggg tacagccgca agcactgcaa
      961 ggacaccgag caggacaacg cgagtcatac aaactcctct gagtgatagg cattcggccg
     1021 cacttcatct ggtgcggtct tggtcgagct gcggcacagc cgcagcggcg ggccggcata
     1081 aggctgccct gaatcacggg ggcagacacc ccggaaagaa tgtaggaggg gtgaggagag
     1141 gtacctcgtg gtgcagcagg cgtcaagagt acgccagctg gcttcactcc aagcccacgt
     1201 tcctgagaag cgacgagaaa cgagaatccg agcgcagtgg gtcgagcctc ggctcgacat
     1261 tgagatagct catccagctc gaacgctcct cataggcccg ttccagccac tcgaagctcc
     1321 gatccttatc gccgagcccg acgtagatca gcgcccggtc ataggcaggc gtgtactggc
     1381 gcacgctctc gccttcaagt tcctcgagcg cctgtactgc gaggtcccgt gcaccgccga
     1441 ccgcgtaggc atgtcccagc gccgagtgga tgaagctttt gcccccagac atcgtaaggg
     1501 cgttctggaa gtggccaatg gcttcctcta tctgctcctg ctccaccaag gcgagcccca
     1561 taaagaaccc tggccacaat gagttcggat gcagttccag ggtcttccaa ccctgatcga
     1621 tcgccggtc
//
LOCUS       DASRPQ010001933         1583 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3988487, whole genome shotgun sequence.
ACCESSION   DASRPQ010001933 DASRPQ010000000
VERSION     DASRPQ010001933.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3988487"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1583
                     /locus_tag="VFD73_21975"
     CDS             <1..>1583
                     /locus_tag="VFD73_21975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76641.1"
                     /translation="RSERGKNWLVQGLADPLSLNGVLTQGRNRTELSDASSNAYSAVL
                     GYNLQLKRKGPRLPFAGLLGGLPKWIRESEGGKALSQATFSLVPSNIRWSSGLSRDYS
                     ESSLFSVPVTRSDDALVHPTVSLNNLWRNSGGITWQPLGMLSLTGDLISTRDLRVYPD
                     STSLGRLAYAERKFLLGIPVGVERDRTLNTALSLTPKISSWLRPRFTSASSFLLTRTL
                     ATRAPVQEDGDSSGAFILPQTLNNSRSRDIGVSLDLSKAIRQLWGDSSGVVRALGRIR
                     PVDFSTRLTRTSTYDLNAFDPGVGFMLGLGGLSEFLNQEGENARGASEIRSATLTSGA
                     DLPLGLTATVSYSLTRTDRYQEVAGGFSQTSSRQREWPVGSIRWTHTFSRGPISVVAA
                     GAAIRRREGTSTQPGAGEFGISSATSSSTLTPDLQLTLRNGIGLTAGYASRSQRTENN
                     GNATELDGNDLTGSLSYAFSLPTSISRTHKRVRSSLTALSSKTLTCLQQGALPGCTVV
                     SDLRRQEFRGGLDTDLLKT"
BASE COUNT          283 a          524 c          486 g          290 t
ORIGIN      
        1 ggcggagtga gcggggaaag aactggctgg ttcagggtct tgccgatccg ctctcgctca
       61 acggcgtgct gacgcagggc cgaaaccgga ccgagctctc cgatgcaagc agcaacgcct
      121 actcggcagt tctgggctac aacctgcagc tgaaacgaaa gggaccccgg ttgccctttg
      181 ccggactgct gggcgggtta cccaagtgga ttcgggaaag cgagggtggc aaggccctga
      241 gccaagccac attcagctta gtgcccagca atatccggtg gagcagcggc ctgtcccgcg
      301 actactccga atcctccctc ttttcggtgc cggtaacccg gagcgacgac gcgctggtcc
      361 atccgaccgt gtcgctcaac aatctctggc gcaactccgg cggcatcacc tggcagccgc
      421 tcggaatgct gtccctgacg ggcgacctca tcagcacccg cgaccttcgg gtctatcccg
      481 actcgaccag tctcgggcgc ctggcgtatg cagagcggaa gttccttctg gggattccgg
      541 tgggagtgga gcgggatcgc acgttgaaca cggcgctttc gctcacgccg aaaataagct
      601 cctggctgcg accccggttc acctcggcca gcagctttct cctgacccgg acactcgcca
      661 ccagggctcc ggtgcaggag gacggtgaca gtagcggtgc gttcattctg ccccagacgt
      721 tgaataactc gcggtcgagg gacatcggtg tctccctgga tctctcgaaa gccattcggc
      781 aactctgggg tgacagcagc ggtgtggtcc gagcgctggg ccggatccgg ccggtggatt
      841 tcagcaccag actgacccgc acttcgacgt acgatttgaa cgcgttcgat cctggtgtcg
      901 gcttcatgtt ggggctcggc ggacttagcg agttcttgaa ccaggaagga gagaatgccc
      961 gcggcgccag tgaaattcgg agtgcaactc tcacctccgg tgccgacctg ccgcttggtc
     1021 tgaccgcaac ggtttcgtat tcgctcacga ggacggaccg gtatcaggag gttgccggtg
     1081 gattttccca gacctccagc cgccaacgtg agtggccggt cggcagcatc cgctggaccc
     1141 acacgttctc gcgtggtccc atttcggtcg tggccgcggg agccgccatc cgccgccgag
     1201 agggcacgtc gacccaaccc ggagcgggcg agttcgggat tagcagtgcg acgtcctcat
     1261 ccacgctgac cccggacctc cagctcacct tgcggaacgg catcggcctc accgccggct
     1321 atgccagccg ttcccaacga accgagaaca acggcaatgc caccgagctc gacggaaacg
     1381 atctcaccgg ctccctctcg tacgcgttct cgctccccac ctcgatcagc cggacgcaca
     1441 agcgggtacg gtcatccttg accgcgctct cgtccaagac gctcacctgt ctgcagcagg
     1501 gcgcattgcc gggctgtacc gtcgtctccg atctgcggcg gcaggagttt cgcggcggcc
     1561 tcgacaccga tctgctgaaa acg
//
LOCUS       DASRPQ010001934         1249 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_232536, whole genome shotgun sequence.
ACCESSION   DASRPQ010001934 DASRPQ010000000
VERSION     DASRPQ010001934.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1249
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_232536"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1249
                     /locus_tag="VFD73_21980"
     CDS             <1..>1249
                     /locus_tag="VFD73_21980"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3857 and transglutaminase domain-containing
                     protein"
                     /protein_id="HZI76642.1"
                     /translation="RVLRPDGTVISEAPAQVQDADVPASMGDPVYSDTKIRRYSLSGV
                     APGTLVDWSYTLEEVTPFFPGDFLQTWSIQNSAFTRRSRFLVDLPAAMHAHLVERNLT
                     FRRRETTSHGRRTYLWTAQDVPPVEPEEFMADSDGTTMSVGISAPIEWEDVGTWYTAL
                     ARDRYTLNQTVRERVRSLVRTAATPDDSLRAIQRWVAQDIRYVSIALGLGGYQPRMPA
                     EVVRTGYGDCKDKATLFIAAARALGFRAYPVLLNAGEQVDRELPSIRQFDHAIAVLER
                     PAGRVYLDLTADLAPYGDLPESDQGRFGLIVYPDGTSEQVTLPETPAGDNLNQTVIVG
                     ALSSDGYVSATYQERGSGSRQYGLRSLFVGPIDSLKRADFARSIATKLFPGASGDSLQ
                     IFDGRDLTAEPRVALQIVHGLAAR"
BASE COUNT          225 a          403 c          396 g          225 t
ORIGIN      
        1 cgcgtcctgc ggcctgacgg caccgtcatc agcgaggcgc cggcccaagt tcaggacgcc
       61 gacgttcccg catccatggg agacccggtc tacagcgata ccaagatccg ccggtactcc
      121 ttgagcgggg tggccccggg aaccctcgtg gactggagtt acaccctgga agaagtgact
      181 cccttcttcc ccggcgattt cctccagacc tggagcatcc agaacagcgc cttcacccgg
      241 cgatcccggt ttctcgtcga tctgccggcg gcaatgcacg cccacctggt cgagcggaat
      301 ctgacgttcc ggcggcggga aacgacatcc cacggcaggc gcacctatct gtggaccgcc
      361 caggacgttc cgccagtcga gccggaagag ttcatggccg attcggacgg cacgaccatg
      421 agcgtcggca tcagcgcccc catcgagtgg gaggacgtcg gcacctggta cacggcgctc
      481 gcgcgcgatc gctataccct gaatcagact gtgcgggagc gggtccgttc gctggtgcgc
      541 accgcggcaa ctcctgacga ttcactccgg gccattcagc gctgggtggc ccaggacatt
      601 cggtacgtct cgattgcgct cggcctaggc ggttatcagc cgcggatgcc ggcagaggtg
      661 gtgagaaccg gctatggtga ttgcaaggac aaggcaacgc tcttcatcgc cgcagcgcgg
      721 gcgctgggct ttcgagcgta tccggtcctg ctgaatgccg gagagcaggt cgatcgagag
      781 ctcccctcga tcaggcagtt cgaccacgcc atcgcagtcc tcgagagacc tgccggcaga
      841 gtgtatctcg atctcaccgc tgatctcgcc ccgtacggag atttgccgga atcggatcaa
      901 ggccggttcg gcctgatcgt gtatccggac gggacatcgg agcaggtcac gctgccggag
      961 acaccggcag gagataacct gaatcagacc gtcatcgttg gcgccctctc ctccgacggt
     1021 tacgtgagcg caacgtatca ggagcggggc agcggcagcc ggcagtatgg cctgcgcagt
     1081 ttgttcgtag gcccaatcga ttccctaaaa cgggcggact ttgcccggtc gatcgcgacc
     1141 aagcttttcc ccggcgccag cggggacagt ttgcagatct tcgacggccg cgatctaacg
     1201 gcagagcccc gggttgccct gcagattgtt catggtctgg ctgcaaggt
//
LOCUS       DASRPQ010001935         1819 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3041633, whole genome shotgun sequence.
ACCESSION   DASRPQ010001935 DASRPQ010000000
VERSION     DASRPQ010001935.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3041633"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            126..665
                     /locus_tag="VFD73_21985"
     CDS             126..665
                     /locus_tag="VFD73_21985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76643.1"
                     /translation="MARHPDWFERLDAILAVVRQSGGIAWLGRQEMKAVFGCSERDSI
                     RLLHKFGAEAQDNSLSLPRSSLLAQLEAIRAGSAYAAFLRQRQEVARHLGAAREETAA
                     RQFRVRPAVPEEPRRRLEDLPPTITWRRASRVEPGRFEIVYHDGADLMGQLAAFLSTA
                     GVNREEFLAGTEPSDEPPR"
     gene            649..1398
                     /locus_tag="VFD73_21990"
     CDS             649..1398
                     /locus_tag="VFD73_21990"
                     /inference="COORDINATES: protein motif:HMM:NF014654.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HZI76644.1"
                     /translation="MNRPASGASLPPVELAAYAGPLDLLLDEVRRQNVAIEKIAMAPI
                     VARFLAYTAAAAERNLNLDIEWLHLAATLIQWKSRSLLPRDDRDQPPRDPIRDDLVQQ
                     LLAHRKAAAGELARRQAVEGTRFSRAAADGPSVPATDAPGEPGFVSVWDLIQQARELA
                     GWVEQQRADRRCWRESLGVAQNDVTVSEMMDYLRDQLAAAGGTLDGVALLASQPTASR
                     RSCLFLGMLEMVQQVELQQDEVFGAILLSRA"
BASE COUNT          324 a          601 c          565 g          329 t
ORIGIN      
        1 tatcataagc tagaaatctc tgccttacgg caagtagtga cagaactttg ccacatccgc
       61 tagactggtc ccgatcaccg gaatccgccc ggaatccctg tccgacgccg tttggaaacg
      121 atgctatggc ccgccacccc gactggttcg aacgcctcga cgccatcctc gccgtcgtcc
      181 gccagtccgg cggcatcgcc tggctcggcc gccaggagat gaaagcggtc ttcgggtgca
      241 gcgagcgcga cagcatccgt ctcctccata agttcggggc cgaagcgcag gacaacagcc
      301 tttccctgcc ccggtcctcc ctgctggcgc agctcgaagc catccgcgcc ggcagcgcgt
      361 atgccgcgtt tctgcggcag cgccaggagg tcgccaggca cctcggcgcc gcccgcgagg
      421 agaccgccgc ccgccagttc cgggtgcgtc ctgcggtgcc ggaggaaccg cgccgccgcc
      481 tggaggatct gcctcccacg atcacctggc ggcgggcctc ccgggtcgaa ccgggccgct
      541 tcgagatcgt ctaccacgac ggggcggacc tgatggggca gctggccgcg tttctgagca
      601 ctgccggggt caaccgcgag gagtttttgg cgggaacgga gccttccgat gaaccgcccc
      661 gctagcggcg cttccctgcc cccggtcgag ctcgcggcct acgcggggcc gttagacctg
      721 ttgctcgacg aggtgcgccg gcagaacgtg gccatcgaga agatcgccat ggcgccgatc
      781 gtcgcccgct ttctggcata cacggcggcc gccgccgagc gcaatctgaa cctcgatatc
      841 gaatggctgc acctggcggc caccctgatc cagtggaaat cccggtcgct gctaccccgg
      901 gatgaccgcg accagccgcc gagagacccc atccgggacg acctggtcca gcagctcctg
      961 gcccaccgga aagcggcggc cggggagctg gcacgccggc aagccgtcga ggggacccgg
     1021 ttctcccggg ccgccgccga cggcccatcc gtgcctgcca cggacgcacc cggcgagccg
     1081 ggattcgtga gcgtctggga cctgatccag caggcccggg agctggccgg ctgggtcgag
     1141 cagcagcgcg cggaccggcg ctgctggcgc gagtccttgg gcgttgccca gaacgacgtc
     1201 accgtcagcg agatgatgga ctacctccgc gatcagcttg ccgcggccgg tggcacactg
     1261 gatggcgttg ccctgctcgc gagccagccc accgcttccc ggcgatcctg cctgtttctc
     1321 ggaatgctcg aaatggttca acaggtcgaa ctccagcagg atgaggtgtt tggagcgatt
     1381 ctgctgagtc gtgcttaagc agagacgatc gggcgaaata acaaaccgga actttgcgaa
     1441 tcgcctttcc gcaatgcaga gacagctctt ctggttagcc ttatcgaact ctcccggaac
     1501 catttttggg gaagcatttt cggtcatgtc gagacactgt ctcatctgga gggagaatgt
     1561 tctgcctaaa cagagtgact tgaccagaag gggggattag aaaataagtg gcgagttgct
     1621 cgcaactcgg tgtataaatc aaacatggat gttcctgttt tcaccgcgtc tcccgacccc
     1681 acatgtatgt accagacgcc atccttgaag gaatccagtg cgaagatccg gcgggctatt
     1741 tcgcttaagc aggggctctc ctgtattttc ggcagtgtcg gctttgggaa aagttcccta
     1801 ctccgctaca ttgcatccg
//
LOCUS       DASRPQ010001936         1040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1498880, whole genome shotgun sequence.
ACCESSION   DASRPQ010001936 DASRPQ010000000
VERSION     DASRPQ010001936.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1498880"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(275..511)
                     /locus_tag="VFD73_21995"
     CDS             complement(275..511)
                     /locus_tag="VFD73_21995"
                     /inference="COORDINATES: protein motif:HMM:NF016070.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF397 domain-containing protein"
                     /protein_id="HZI76645.1"
                     /translation="MVITYNGMLAAELGEVRWQKSWHSNPNGECVELAALPTGEIAMR
                     NSRYPTGPVLLYTQAEITAFLAGAKDGEFDHLLG"
     gene            754..>1040
                     /locus_tag="VFD73_22000"
     CDS             754..>1040
                     /locus_tag="VFD73_22000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76646.1"
                     /translation="MPADMQEAVALAHLSVATGSGDDDEDVTIPWPAVADGMPRLLPV
                     PSAWWETPAVTTRALSARPEEARTARRFVREMLTCWGLEALSDDAEMIVDEL"
BASE COUNT          188 a          308 c          327 g          217 t
ORIGIN      
        1 gcgcgtgccg aaaatgctgg ggggaacgtc ccaggccgag tcttcggacg agaccatcgg
       61 cactcctcgc atcgtcgcac cctagatcct ggcggggtgt ggaccagtct cccacggggt
      121 ctcacgctta cggaagagga agcatgacaa ttcaatagaa gtcttgatct ctccgggttt
      181 ccgtagaccg cgaggtacca gtttgccagg ttataactcc cgagtcgaag ggcgacggcc
      241 ggtgaagttg ttactgacgg ttacagtggt tctcttagcc gagcaggtgg tcgaattcac
      301 cgtccttggc gccggccagg aaggcggtga tctccgcctg agtgtagagc aggaccgggc
      361 cggtggggta ccgcgagttc ctcatcgcga tctcgcccgt cggcagcgcg gccagttcca
      421 cgcactcccc gttcgggttg ctgtgccagc tcttctgcca gcgcacctcg ccgagttcgg
      481 cggcgagcat gccgttgtac gtaatgacca tgtttatccc ctttcgagag ggtaacgcac
      541 gtcaggcacc taaagttcgc tcgctgtaat atctagttaa cagctggtga acaagttgcc
      601 tgatgagtcc cgcttgcctg cagccccctg tgtgcctctc cggagacctg tgcacaaagc
      661 gaatgaacgt gcatctggtc ttgcatttgc acaatatatc aggcaacatg tggttaagca
      721 cgcagataac taccgtgatg ggcaagcgtt ttcgtgcccg ctgacatgca ggaagctgtt
      781 gcgttggcgc atctcagtgt cgctacgggt agtggggatg acgacgagga cgtcaccatc
      841 ccctggccgg ccgttgctga tggcatgccg cggctgctgc cggtgccttc ggcatggtgg
      901 gaaaccccgg ccgtcaccac ccgggcgctc agtgcccggc cggaggaggc caggaccgcc
      961 cgccgcttcg tccgcgagat gctgacctgc tggggcctgg aagctctgtc ggacgacgcc
     1021 gagatgatcg tcgatgagct
//
LOCUS       DASRPQ010001937         1165 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_851091, whole genome shotgun sequence.
ACCESSION   DASRPQ010001937 DASRPQ010000000
VERSION     DASRPQ010001937.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_851091"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..442
                     /locus_tag="VFD73_22005"
     CDS             <1..442
                     /locus_tag="VFD73_22005"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HZI76647.1"
                     /translation="DGQEDSAMASISSYVVRDVLGLEASATCREAAELMSKRHIGAVA
                     VRQGGKILGIITERDLVTRILSRGLDCQTPILEAMRRDVPVVGPELNEVECANLMKEH
                     ETRHLLVGDQGSAAGLISMRDVMQMMLSDKQYLIEQMQAYIQGY"
     gene            781..1026
                     /locus_tag="VFD73_22010"
     CDS             781..1026
                     /locus_tag="VFD73_22010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76648.1"
                     /translation="MAAQAAQRPEAGRMLHPTGFILKSFQVLGSGGVAGVLGGVASHT
                     VWVGICFGVAGVLAALTFMDCRCACVKPGSDCDEEQL"
BASE COUNT          192 a          360 c          415 g          198 t
ORIGIN      
        1 ggacggacag gaggattccg ccatggccag catctccagc tacgtggtcc gtgacgtgct
       61 cggactggag gcgagcgcca cctgccgcga ggcagccgag ctgatgtcga agcgtcacat
      121 cggcgcggtc gccgtgcgac agggcggcaa gatcctcggg atcatcaccg agcgcgacct
      181 ggtcacccgc attctctcgc gcgggctgga ctgccagacg cccattctcg aggcgatgcg
      241 ccgcgacgtt ccggtggttg gtcccgagct gaacgaggtc gagtgtgcga acctcatgaa
      301 ggagcacgag acccggcatc tcctcgtcgg tgatcagggc tcggcagcgg gcctcatctc
      361 catgcgcgac gtgatgcaga tgatgctctc ggacaagcag tacctgatcg agcagatgca
      421 ggcgtacatc caggggtact gagcctggac gctggcgcgc cccggggccc ggagggtgac
      481 ccagggctca ggcaagcgtt cgccaccgag cccgtctgcc gcgtcaatcc ggtgacgcgt
      541 gcgcaacgcg cgaggcagtg caccctttca gtggacgttc aaggtcccgg aaaccagggc
      601 tccgagcgtc gtcccccgga cggtcgtgtc ggacccccac gggaccctgt tgcggcatat
      661 gcttcgcatg gcagattgat gtcgggcgct gtgcggttgg cccgggttgc gggcgggacg
      721 taacatccgc cagaaccccg gttggagccc gagtgggctc gaaaggacgg ggaggacgaa
      781 gtggctgcac aagcggctca gaggccggag gccggacgga tgctgcatcc gacggggttc
      841 atactgaaga gcttccaggt gctcggctcg ggtggcgtgg ctggagtgct cgggggcgtg
      901 gcttcacaca cagtatgggt cggtatctgc ttcggcgttg ccggcgtgct ggccgcgctc
      961 acgttcatgg actgccgctg tgcctgcgtg aagcccggct cggactgcga cgaggagcag
     1021 ctctagcgat cgggcagtgc aagcggccgt caagcgggat actggagtcc tccagtcccc
     1081 cgccattgca tttccttccg agctcaggcg tcggactgga cgttcggggg acacgtcccg
     1141 aagttggccc tttcccggag atcga
//
LOCUS       DASRPQ010001938         1465 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2768744, whole genome shotgun sequence.
ACCESSION   DASRPQ010001938 DASRPQ010000000
VERSION     DASRPQ010001938.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1465
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2768744"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1465)
                     /locus_tag="VFD73_22015"
     CDS             complement(<1..>1465)
                     /locus_tag="VFD73_22015"
                     /inference="COORDINATES: protein motif:HMM:NF006129.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-requiring protein"
                     /protein_id="HZI76649.1"
                     /translation="VQARHEELAAFMACAHAKFTGEVGVCMATSGPGAIHLLNGLYDA
                     QMDHQPVVAIVGQQATIGLGASFQQEVDLISLFKDVAGAYVHMASTPAQIRHLVDRAM
                     RIAQAERTVTCIILPNDVQEMDAVEHAPRRHGASFSGIGYSRPLVIPTEQDLRRAAQV
                     LNRGEKVAMLVGAGALHASEEVMEVAELLGAGVAKALLGKAVLDDSLPYVTGSIGLLG
                     TKPSWDMMMDCDTLLMVGSSFPYSEFLPKLDQARGVQIDIKPRQLSLRYPMEVNLCGD
                     SRETLQLLIPYLRRKADRSWREQIEENVADWWKVLEARAMNTADPINPQRVFWELSPR
                     LPDRCILTCDSGSSANWYARDVKVRPGMMASLSGNLATMGPGVPYAIAAKFAHPDRPV
                     IAMVGDGSMQMNGINGLITIEKYWRAWTDPRLIVLVLYNHDLNQVTWEQRAFAGDPKF
                     EGSQDLPDFPFARYAELLGFTGIVMETPDQIGPGWDQA"
BASE COUNT          274 a          475 c          460 g          256 t
ORIGIN      
        1 gcgcctgatc ccagccgggc ccgatctgat ccggcgtctc catgacaata ccggtgaacc
       61 ccagcagctc ggcataccta gcgaagggga aatcaggcag atcctgtgac ccttcgaact
      121 tgggatcgcc ggcaaaggcg cgctgttccc aggtcacctg attgaggtcg tgattgtaga
      181 gcaccagcac gatcagccgg ggatcggtcc acgcccgcca gtacttctcg atggtgatga
      241 ggccgttgat gccgttcatt tgcatggacc catcaccgac catcgcgatc accgggcggt
      301 cagggtgcgc gaacttcgcc gcaatcgcat acggcacgcc gggccccatg gtggcgagat
      361 tgccggagag cgaggccatc atgccgggcc ggaccttcac gtcgcgcgcg taccagttcg
      421 ccgacgatcc agaatcgcag gtcaggatgc agcggtccgg gagccgcggt gacagctccc
      481 agaacacccg ctgagggttg atgggatcag ccgtgttcat ggcgcgggcc tcgaggacct
      541 tccaccagtc ggccacgttc tcctcgatct gctcccgcca ggagcggtct gccttgcgcc
      601 gcaggtacgg aattaagagc tgcagcgtct cccggctgtc gccacaaaga ttgacttcca
      661 tcggatatcg gaggctcagc tggcggggct tgatatcgat ctggacacca cgggcctggt
      721 cgagcttggg aagaaactcc gaatagggga agctgctccc gaccatgagc agggtgtcgc
      781 aatccatcat catgtcccag ctcggcttgg tcccgaggag gccgatggaa ccggtgacgt
      841 agggcagcga atcgtcgagg accgccttac ccagcagtgc cttggccacc ccggcaccga
      901 gcagctcggc gacctccatg acttcctcgc tggcatgcag cgcgccggcg cccaccagca
      961 tggccacctt ttctccacga ttgagcacct gcgccgcacg ccgcagatcc tgctcggtgg
     1021 ggatgacgag cggccgggaa tacccaatgc cgctgaacga cgcgccgtgc cggcgggggg
     1081 cgtgctctac cgcgtccatt tcctgaacat cgttgggcag gatgatacag gtgacggtgc
     1141 gttccgcctg cgcgatccgc atggcccgat cgaccagatg gcggatctgg gcgggggtgg
     1201 atgccatgtg gacgtacgcg cccgccacat ccttgaacag ggagatgagg tcgacctcct
     1261 gctgaaagct cgcgcccaga ccgatagtgg cttgctgacc cacaatggcg accaccggct
     1321 ggtgatccat ctgtgcgtca tacagtccgt tcaggagatg aatggcgccc ggacctgaag
     1381 tcgccatgca gactccaacc tcgccggtga acttggcgtg cgcgcacgcc ataaaggcgg
     1441 ccagctcctc atgcctcgcc tgaac
//
LOCUS       DASRPQ010001939         1923 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4292459, whole genome shotgun sequence.
ACCESSION   DASRPQ010001939 DASRPQ010000000
VERSION     DASRPQ010001939.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1923
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4292459"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1567)
                     /locus_tag="VFD73_22020"
     CDS             complement(<1..1567)
                     /locus_tag="VFD73_22020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76650.1"
                     /translation="MPRVPLHALIWSPEQRLYELYTRGQFTQRFRPAEEAAWLTWLRG
                     VPSFAFHGASGNLNVYQEARPRGGSYWSAYHTSQRRTHKRYLGSSAQVTFARLEETAQ
                     ALARASMPPSPSASAMRSAAGQPLLLSSKLAPPRLPHALVERERLLVALDGALLTPLT
                     LLAAPAGWGKTTLLAAWARRHEAQVAWLSLDELDTSPTRFWIGLIAALRRGGGFAPSL
                     GETAVALLSSPQPPPLSTILTALLQELEGRPAPPAPIVPMVDDYQLIEERAIHQGMSF
                     FLEHLPAHVHVILASRVDPDLPLSRWRVRGQLTEIRADDLRFQEGEASQYLGQLLSPP
                     LSQEEVQQLLSRTEGWIAGLHLAALTLQQRQDRTAFLQAFTGSQRYLLDYVQEEILSR
                     LPERVRDFLLHTAILSRLDASVCQAVTAAPERRVSQQMLAFLERANLFLVSLDEERRS
                     YRLHELFREALLSALSTTHPESVPVLHRRAARFYEAQREWAEAITHALEARDYSTAAN
                     LMEHTVEQFWLRGE"
BASE COUNT          344 a          602 c          630 g          347 t
ORIGIN      
        1 cctctccacg cagccagaac tgctcgacgg tgtgctccat gagattcgcc gccgtggagt
       61 agtctctggc ctcaagcgca tgggtaatgg cctcggccca ctctctttgg gcctcgtaaa
      121 agcgggcggc gcggcggtgc aagactggga cgctctccgg gtgggtggta gagagagctg
      181 agagcagggc ttcgcgaaag agctcatgca gccggtagct gcgccgctcc tcgtccaggg
      241 acaccaggaa gagattggct cgctccagaa aggcaagcat ctgctggctg acccgtcgtt
      301 ccggcgcggc ggtcaccgcc tggcacaccg aggcgtccag gcgcgaaagg atggcggtgt
      361 ggagtaaaaa gtcgcgcacg cgctcgggca ggcgcgagag gatctcctcc tgcacgtagt
      421 ccaacagata gcgctggctg ccggtaaacg cctgcaggaa cgccgtgcga tcctggcgct
      481 gctgcaaggt gagggccgcc aggtgcaagc cggcgatcca gccctcggtc cggctcaaaa
      541 gctgctgcac ctcctcttgc gagagcggcg gggagagcag ctggccgaga tactggctgg
      601 cctcgccctc ctggaagcgc agatcgtccg cgcggatctc ggtcagctgt ccgcgcaccc
      661 gccaccggga gagcggcagg tccgggtcca cgcggctggc gaggatcaca tgcacgtgag
      721 caggcagatg ctccaggaag aagctcatcc cctggtgaat agctcgctct tcgatcagct
      781 gataatcgtc caccatgggc acgatggggg cgggaggggc ggggcgccct tccagttctt
      841 ggagcaacgc tgtgaggatg gtggaaagcg gcggcggctg gggcgaggag agcagggcca
      901 ccgcggtttc cccaaggctc ggcgcgaacc ctccaccgcg gcgcagggcc gcgatcagcc
      961 cgatccagaa gcgggtcggg cttgtgtcga gctcatccag cgagagccag gcgacctgcg
     1021 cctcgtgtcg gcgcgcccag gcggcaagca gcgtggtttt gccccagcca gccggagcag
     1081 cgagcagggt cagcggggtc aagagcgccc catccagtgc aaccagtaag cgctcccgct
     1141 ccaccagcgc gtgcggcaga cgcggcggag cgagcttgct ggagagcagc aacggctgcc
     1201 cggctgctga tcgcatcgcc gacgcagacg gcgagggggg catggacgcg cgagcgaggg
     1261 cctgggccgt ctcctctaag cgggcgaacg tcacctgcgc cgatgatccc agataccgct
     1321 tgtgggtccg tctctggctc gtatgatagg cagaccaata cgaccctccc cgtggccggg
     1381 cctcctggta gacattgagg ttgcctgacg cgccgtggaa ggcaaaggaa ggtactccgc
     1441 gcagccaggt cagccaggcg gcttcttctg ctgggcgaaa ccgttgtgtg aactggcccc
     1501 gcgtgtacag ctcatacagg cgctgttcgg gggaccagat aagcgcgtga agtgggactc
     1561 taggcatatg gtcttcccag tgtttgcgtt gttcccaacg gctcgtgcgt tcctcccaac
     1621 accacggagg agagcaaaga agaggcgctt acttccaaaa tggacactcc ccctctattg
     1681 cattccttct tgttcttctt ttctttcttc tcgcaccttc tcttgtcaaa ttttcatcag
     1741 accccaaatg gactaccctt ctttctgaac aagttcccat cccctttcct cttccatcca
     1801 acgggggaca ttgcgcactg gccgcacctt tcgcggggga tggggggtga tcaccatcga
     1861 ttgccctttg agcttggctt tgctcaccga accgcacgtc gggcattgta cctcttggac
     1921 tgt
//
LOCUS       DASRPQ010001940         1154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3394709, whole genome shotgun sequence.
ACCESSION   DASRPQ010001940 DASRPQ010000000
VERSION     DASRPQ010001940.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3394709"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..667
                     /locus_tag="VFD73_22025"
     CDS             194..667
                     /locus_tag="VFD73_22025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76651.1"
                     /translation="MGYKLRVAPEVTELAGRLNASVRSTWRGMPASREASRMLGKIGF
                     WIAQPGLDAAYQLHFAELQRARRAVADVATSRKRLELQIAELERQADTGQDATGQLTQ
                     LRRRYTDMQAKEERVTAASRRLMAEINAFKTGTEATKTAYTAAEEAAHAVWTQVT"
BASE COUNT          227 a          361 c          380 g          186 t
ORIGIN      
        1 cgaacggcat cacgttcggg cctgacggag cgctatatgt ctcgatcaac agcttgtgcc
       61 cggccgatct atctttgctg aatggccttg ggctgccgcc caattactgc ccgaactcgg
      121 ggcaggtgat ccggctccgg tccgcctgac atgcgatagt actcgttagg cgtgttacgt
      181 gcgggaggcg ggcatggggt acaagctccg ggtagctccc gaggtcacag agttggcggg
      241 ccgattgaat gcctccgtac gcagcacgtg gcgcggcatg ccagcctcca gggaggcgag
      301 ccggatgttg ggcaagatcg gattctggat cgcgcagccg ggcctggatg ccgcatatca
      361 gctgcacttt gccgagctgc aacgagcacg cagagccgtt gccgacgtgg ctacttcgcg
      421 caagaggcta gagctccaga tcgccgaact ggaacggcaa gccgacaccg gccaggatgc
      481 caccggccag ctcacccaat tgcgccgccg gtacaccgac atgcaggcca aagaagagcg
      541 cgtgacggcg gccagccgac ggctgatggc tgagatcaat gccttcaaga ccggcacgga
      601 agccaccaag accgcctata cggccgcaga agaggccgcc cacgccgtat ggacgcaggt
      661 cacctgaacc gttgtgacct gggctgagct gacagcaacg gtggcagcaa cagcagccac
      721 caccggctac cagcagcgac cggcgacagc gcacaacgct cgcacgatca gcgccgcttg
      781 ggcgtccgtc acgtctgaaa aggggaaggt cggcggttcg accccccctg accgcccctt
      841 ctgaccagcg caaacgctgc tggtgatcag gcggccgata cggccacgat ctggcaatca
      901 cgcgggctgg gggatgatcc ggatgtaggg cttgggtgcc ttgaaatcgg tcgagatggg
      961 tccggtcggt ctcgtccagc aggagggctg ggccttcgcc gcgctgaggc acaaaggcgc
     1021 cgggggttat caccttcgcg agtcatgtag ccaagggcgt tacgccagaa gactgctgcc
     1081 cggtcggtga cgttcagcac caatgatccg atctgcgcca tagccggatt ctggcgcact
     1141 ggtcggacac atcg
//
LOCUS       DASRPQ010001941         1349 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1159719, whole genome shotgun sequence.
ACCESSION   DASRPQ010001941 DASRPQ010000000
VERSION     DASRPQ010001941.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1349
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1159719"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            303..557
                     /locus_tag="VFD73_22030"
     CDS             303..557
                     /locus_tag="VFD73_22030"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HZI76652.1"
                     /translation="MAWTVYLVRCADGSFYTGITTDPVRRVTQHNAGTGAAYTRSRLP
                     VALVYLEPAADRSGALRREYAIRRLSRRKKEELASLPLRC"
     gene            complement(554..1096)
                     /locus_tag="VFD73_22035"
     CDS             complement(554..1096)
                     /locus_tag="VFD73_22035"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2231 domain-containing protein"
                     /protein_id="HZI76653.1"
                     /translation="MESKVKLAGHPVHPMLIVFPLGLLATALVFDIIYLLSDHAQWTL
                     VAYYMIGAGVIGGLAAAVPGWLDWFAIPRGTRAKRIGLWHGIGNVVVLGLFIVSWVLR
                     RNNPELPPTGAIVAAFAAVVIALVTAWLGGEMVDRLGVGVDNGAHLDAPSSLSKLPAS
                     VSREAGKYGGPERRTSTSSA"
     gene            complement(1129..>1349)
                     /locus_tag="VFD73_22040"
     CDS             complement(1129..>1349)
                     /locus_tag="VFD73_22040"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HZI76654.1"
                     /translation="MPPDLQGKSGRNFDRAFVQHEIADHQSNIQKLQTQAIPSARDAA
                     VKAYLQKTVTEMQAHLSSLKQVQQQLGS"
BASE COUNT          254 a          430 c          424 g          241 t
ORIGIN      
        1 ctcccgtcgc aagcaccagc cggccaccaa acaaccaggt cagcagggtg cgctgatcgg
       61 gaagggtgtt tttgcccggc ctacgccgat cgggcaccgt aggaaccgct gcccgcccgg
      121 aaggagcgga agatcccatc gaacctctgc gtgtgtgctg ggagctgatt aggagccggg
      181 gacagcccag accagggcct gaagccgttc caggctccta gctcctcact ccgtagcttc
      241 tcaaggggac agccgaagat agggagggcg accacacctg cggtagtgcc ctatcattac
      301 ttatggcttg gacggtctac ctggtccgtt gcgcagacgg gagcttctat accgggatca
      361 cgacggaccc ggtccggagg gtgactcagc acaatgccgg caccggcgcg gcgtatactc
      421 gctcgcggct gccagtcgcc ttggtatacc tggaaccggc agccgaccga tccggcgcgc
      481 tccggcggga gtacgccatt cggcgcctga gccggcgtaa aaaggaagag ctggcgagcc
      541 tgccgcttcg ctgctaggcg gagctcgtgg aggtgcgccg ctcgggcccg ccgtatttgc
      601 cggcctccct ggagacgctg gccgggagct tggataagga gctcggcgcg tcaaggtggg
      661 cgccattgtc tactccgact ccaaggcgat cgaccatttc gcctcccagc caggcggtca
      721 ccaacgcgat gactaccgcg gcgaacgctg ccacgatggc cccggtggga ggcagctcgg
      781 ggttattgcg gcgcagcacc caactcacga tgaaaagacc cagaacgacg acgtttccga
      841 tgccgtgcca cagcccgatc cgcttggcgc gggtgccacg agggatggcg aaccagtcga
      901 gccaacccgg gacggcagct gctaatcccc cgataactcc ggcgccgatc atgtagtagg
      961 ccacgagtgt ccactgggca tggtcggaca gcagatagat gatgtcgaac accagcgcgg
     1021 tcgccagcaa tcccagcgga aacacgatga gcatcgggtg gaccggatgt cccgcgagtt
     1081 tgaccttgct ctccataccg ctaccctcgg ctcgctttca aaggtttgtt aactccccag
     1141 ctgctgctgt acctgcttca agctgctcag atgcgcctgc atttccgtga cggttttctg
     1201 caagtaggcc tttaccgcag cgtctcgagc cgacgggatc gcctgcgtct gcaacttttg
     1261 aatattcgac tgatggtcgg caatctcgtg ctgaacgaac gcgcgatcga agtttcggcc
     1321 cgacttgccc tgaaggtccg ggggcatcg
//
LOCUS       DASRPQ010001942         1232 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1499078, whole genome shotgun sequence.
ACCESSION   DASRPQ010001942 DASRPQ010000000
VERSION     DASRPQ010001942.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1499078"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..738
                     /locus_tag="VFD73_22045"
     CDS             <1..738
                     /locus_tag="VFD73_22045"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HZI76655.1"
                     /translation="GQIAESDRGLVLVSGVSGSGKSSTIAAMVHHINRTLHKHVVTIE
                     NPIEFLHRDLSCSITQREVGVDTESLAIGLRAALRQDPDVVILGDMADAATIDTALKA
                     TETGRLVVGTVTTPDVLTTVERVVGTLPSQEREVGRMRFAESVRAIISQQLLPKKTDD
                     GRIPTVEILIGTPAVRESLKDPERVTQIKRLMADGRKDLGSQTYEQHLEELVESGQIT
                     EETRRAALATAGNPFTSPRRTKRAASS"
     gene            750..>1232
                     /locus_tag="VFD73_22050"
     CDS             750..>1232
                     /locus_tag="VFD73_22050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76656.1"
                     /translation="MGAPTLLETTSRILALPREAGTAALEEARRIVADHLTHLGYQVQ
                     FQRFRFTPASLDAFPIFGAGLGGLALVILPSLSSGEVPRWLGLLMWAIGLAALTILAT
                     GVGLGWAPLQRGTREDANLLATRPGSHPRRWIVAHLDSKAQGHSMAGRLVAVWVVAGA
                     I"
BASE COUNT          228 a          379 c          412 g          213 t
ORIGIN      
        1 ggccagatcg cagagtcgga tcgcgggctg gtgctggtga gtggcgtgag cggcagcgga
       61 aaaagctcaa ctattgccgc aatggtgcac cacatcaatc ggacgctgca caagcacgtg
      121 gtgaccatcg aaaatccgat agagtttctt caccgcgatc tcagctgctc cattactcag
      181 cgcgaggtag gcgtggacac cgagagcctg gcgatcgggt tgcgtgcggc gctgcggcag
      241 gacccggatg tggtgattct tggcgacatg gccgacgctg caacgatcga taccgcgctc
      301 aaggccaccg aaaccggccg gctggtcgtc ggaacggtga ccacgccgga tgtcctgacc
      361 accgtggagc gggtcgtcgg caccctgccg agtcaagagc gagaagtcgg ccggatgcgg
      421 tttgccgaat cggtacgtgc catcatctcc cagcagttgt tacccaaaaa gaccgacgac
      481 gggaggatcc ccaccgtgga gatcttgatc ggtacgcccg cggtgcggga gtcgctcaag
      541 gatccggagc gggtgactca gatcaagcgt ctgatggctg atggaagaaa ggacctgggt
      601 tcccagacgt acgagcaaca cctggaggag ctcgtggaat cagggcagat cactgaggag
      661 accagacgcg cagccctggc aactgcaggc aatcccttca ccagcccacg gcggaccaag
      721 cgggctgcta gctcctgagc ggaccagtgg tgggtgcgcc aacgctgctg gagactacca
      781 gccggatcct ggcgcttccc cgcgaggccg gtactgctgc cctcgaagaa gcacgccgca
      841 tcgtcgccga tcatctcacc cacctcgggt atcaggtcca gttccaacgg ttcaggttta
      901 ccccggccag cctcgatgcc ttccccatct ttggcgccgg tctgggtggt ctcgctctcg
      961 tcatcctccc gagcctttca tcaggagagg tgccgcgctg gctgggattg ctgatgtggg
     1021 cgattggact cgcggcgctc accattctgg caaccggagt ggggctcggc tgggcgccgc
     1081 tgcagcgggg cacgcgagag gacgccaatc tgctggcgac tcgcccgggc agccatccgc
     1141 gccgctggat cgtagcgcat ctcgactcaa aggcgcaggg tcactcgatg gcgggacgtc
     1201 tcgtggcggt gtgggtcgtc gccggggcga tc
//
LOCUS       DASRPQ010001943         1014 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3395016, whole genome shotgun sequence.
ACCESSION   DASRPQ010001943 DASRPQ010000000
VERSION     DASRPQ010001943.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3395016"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1014)
                     /locus_tag="VFD73_22055"
     CDS             complement(<1..>1014)
                     /locus_tag="VFD73_22055"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HZI76657.1"
                     /translation="SSLTMWVLAALLFFIPQGLAVSYLSARFPEEGGIYFWTKRAFGD
                     AHGFMCGWTYWVNNVLYYPNLLMSTAVIGTYVIGRGDTALMDNWTYILIATMVSLWVA
                     VWLNIVGLKTGRWLQNLGAVGTYIPGAVLVGFGLHAWLTRASATAITWKTVTPHFGDM
                     SQLNLWASIAFAYAGLELCAVMGDEVKNPRRTLPRSIYISAPFIAFLYLAGTASVLWL
                     VPGSDVHVVSGFFQAMAAGARDLGSLGWLIPLAAALYVLGNIGGIGAWLTGPARVAFV
                     IGLDRYFPPAFGRVHPRWKTPYVAILTQAVLATLFLLLSVMGKGTTVEKAYLILLDTM
                     LLV"
BASE COUNT          237 a          317 c          306 g          154 t
ORIGIN      
        1 tagaccagga gcatcgtatc cagcaggatc aagtacgcct tctccactgt cgttcctttt
       61 cccataaccg agagcagcaa aaagagcgtt gccagcaccg cctgggtcag aatcgcgaca
      121 tagggtgtct tccaacgagg atggacccgt ccgaacgccg ggggaaagta gcgatcgagc
      181 ccgatcacga atgcaacccg cgcgggaccc gtcagccagg ccccgattcc accgatgttc
      241 cccaggacgt atagcgctgc cgccagcgga atgagccagc cgagggagcc caggtcgcgc
      301 gctcccgccg ccatcgcctg gaaaaatccc gagaccacgt gcacatccga ccccggaacc
      361 agccacaaaa ctgaagcggt tccggcgaga tagaggaatg cgatgaacgg tgccgagatg
      421 tagatcgagc gaggcagcgt tcggcgcggg ttcttgacct cgtcgcccat cacggcacac
      481 agctcgagcc cggcatacgc aaaggcgatc gaggcccaca aattgagctg agacatgtcg
      541 ccgaagtggg gagtcaccgt cttccaggtg atggccgtcg cgcttgcgcg ggtgagccag
      601 gcgtggagcc caaaccccac caggacggcc ccgggaatgt acgtgcccac tgccccgaga
      661 ttctgcagcc agcgccccgt cttgagtccc acgatgttca gccacaccgc aacccagagc
      721 gacaccatgg tggcaatcag gatgtaggtc cagttgtcca tcaaggcggt atcgccccgt
      781 ccgatgacgt aggtgccgat gaccgcggtc gacatcagca ggttgggata gtagaggacg
      841 ttgttcaccc aataggtcca gccacacatg aacccgtgag cgtcgccgaa ggcgcgtttg
      901 gtccagaagt aaatcccgcc ttcttcggga aagcgggcgg agagataact gaccgccagg
      961 ccttgaggga tgaaaaacaa gagagccgcg aggacccaca tcgtaagcga gctg
//
LOCUS       DASRPQ010001944         1109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2133392, whole genome shotgun sequence.
ACCESSION   DASRPQ010001944 DASRPQ010000000
VERSION     DASRPQ010001944.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2133392"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..968
                     /locus_tag="VFD73_22060"
     CDS             <1..968
                     /locus_tag="VFD73_22060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HZI76658.1"
                     /translation="RTTAAVRRAIQLSQESLRGLARRHGLNPKTVAKWKKRPSVQDER
                     TGPKEPRSTVLSIEEEAIIVAFRRHTLLPLDDCLYALQPTIPHLTRSSLHRCLQRHGM
                     SRLPETEGEKPAKKRFKPYPIGYCHIDIAEVRTEQGKLYLFVAIDRTSKFAFAELHEK
                     ATRRIAGDFLRHLIAAVPYRVHTVLTDNGTHFTTPGNTASAAPLIREAIARGETVWAH
                     AFEYACAQNDVDHRLTKPRHPWTNGQVERMNRTIKDATVRRYHYDSHDQLRQHLSDFV
                     TAYNFARRLKTLKGLTPYEFICKRWTLEPERFRLNPLHQMPGLNI"
BASE COUNT          229 a          370 c          333 g          177 t
ORIGIN      
        1 cccgcacgac agcggcggtg cgtcgcgcga tccagcttag tcaagagagc ttgagggggc
       61 tggccaggcg ccacggcctc aacccgaaga cggtggccaa gtggaagaag cgcccctcgg
      121 tccaggacga gcgcactggc cccaaggagc cgcgctcgac cgtgctctcg atcgaggagg
      181 aggccatcat tgtcgccttt cggcggcaca cgctgctgcc gctggatgac tgcctctacg
      241 cgctccagcc cacgatcccg cacctgacac gctccagtct gcaccgctgt ctgcagcggc
      301 acggcatgag ccggctaccc gagaccgagg gcgagaaacc cgcgaagaag cggttcaagc
      361 cttatccgat cggctactgc cacatcgaca tcgccgaggt gaggacggag cagggcaagc
      421 tctacctctt cgtagccatc gaccgcacga gtaagtttgc ctttgcggaa ctgcacgaga
      481 aagccacccg gcgcattgcc ggcgacttcc tgcgccacct gatcgcggcc gtgccctacc
      541 gggtgcatac ggtgctgacc gacaacggca cccacttcac cacgcccggc aacacggctt
      601 cagcggcgcc gctcatcagg gaggcgatcg cgcgcggcga gacggtctgg gcgcatgcct
      661 tcgaatacgc ctgcgcccag aacgatgtgg accatcgcct aaccaagccc aggcacccgt
      721 ggaccaatgg tcaggttgaa cggatgaacc gcacgatcaa ggatgccacc gtcagacgct
      781 atcactacga cagccacgat cagctccggc agcacctgag cgatttcgtg acggcctaca
      841 acttcgcccg gcggctcaag accctgaaag ggctcacgcc ctacgagttc atctgtaaac
      901 gatggacact cgagcccgag cggttcaggc tcaacccgct ccaccaaatg ccggggctaa
      961 acatctagag cgtttccgac ttagagcctg tttgagtggg cctgtatggc tgatccctat
     1021 ctgatcccgc agtgaccatt ttggtttgac tgaggggaca gatgtggacc gaggcgcatc
     1081 gggcgcggca tgacgtgcgc ctgaaagag
//
LOCUS       DASRPQ010001945         4815 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1499605, whole genome shotgun sequence.
ACCESSION   DASRPQ010001945 DASRPQ010000000
VERSION     DASRPQ010001945.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4815
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1499605"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..215)
                     /locus_tag="VFD73_22065"
     CDS             complement(<1..215)
                     /locus_tag="VFD73_22065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76659.1"
                     /translation="MDQREHRTVGEGLLTGVVGAVVAAGWYLIMDTAAGRPFATPNVL
                     GQVFVRGDTMPGVHVVPQAVVEYTLLH"
     gene            complement(295..633)
                     /locus_tag="VFD73_22070"
     CDS             complement(295..633)
                     /locus_tag="VFD73_22070"
                     /inference="COORDINATES: protein motif:HMM:NF017922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HZI76660.1"
                     /translation="MKMPVPPPYAITRRDDGILIEWDTDGHQAFYVARDLRLACPCAG
                     CVEEMTGQALLDPVKIAADIRPLSVALVGAYGLRVQWSDGHSTGIYTYDHLLRLCPCD
                     RCREASPPEK"
     gene            complement(717..1610)
                     /locus_tag="VFD73_22075"
     CDS             complement(717..1610)
                     /locus_tag="VFD73_22075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZI76661.1"
                     /translation="MTIKARSKRRPVRPAQIARAIDEGRESLDLYLDEISRVPLLNRE
                     EEMELARKAFKGNVAAQERLARHNVRFVVSVAKKFQNRGVPLVDLIGEGNLGLMTAAR
                     KFDPDRGVKFISYAVWWIRQAVQAAIARHGRPVRVPLNRTADLSRLGRTTTLLKDRLG
                     RMPTTEELARATGLTVEAVRSLSALNSEAVRLDHPTRDGEGNERIERFSSGEQESTDM
                     TTMANSQTRDIEAALAALPPRDAKVLRLYFGLDDGNSRTLEEIGRMMGVTRERIRQLR
                     DRALLRLREGETGDRLRDLVA"
     gene            complement(1868..2566)
                     /locus_tag="VFD73_22080"
     CDS             complement(1868..2566)
                     /locus_tag="VFD73_22080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76662.1"
                     /translation="MRYLWLALLLPAVSPSVAAAQGACADVPKFFAHPPVVGEWAEMS
                     WDSKDNQGPDHMRMGVIKAERREGKQMYWLQATMDAKGKRTIVQMLTPWDASSLRSPK
                     PAEVVMKMGDQPAMKMSGGFMSRSPASDADWREFCAKSTFVGEESVTVPAGTFKTRHY
                     HGEDGDTWASLDAPLWHIVKMTTKEGKTMLLTARGTGEKNLISEEPVDMKAMMANPAA
                     AQKMKEEIEKNKSK"
     gene            complement(2634..4043)
                     /locus_tag="VFD73_22085"
     CDS             complement(2634..4043)
                     /locus_tag="VFD73_22085"
                     /inference="COORDINATES: protein motif:HMM:NF014307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HZI76663.1"
                     /translation="MSHGIIQLAYLIATALFIFALHWMNTPATARKGVYAGVAAMTIA
                     IVVTWAQPEVIHHVWIVLAILAGFVVGIPLSRVPLTAVPQRTALSHAFGGLAAGLVGT
                     AKYYLWASEGPENLTTFRMVAIIVEVLLGFLTFTGSLMAAGKLQEVKWIPQRPVTYPL
                     QNISNLALLALAIVVGVFLTMHPAASWAPGLFPVIIVLALIFGVLLIIPIGGADMPTV
                     IAILNSYAGLSAVAMGFVLDNKLLITAGALDGSSGLILAIIMCRAMNRSFVNVLFGAF
                     GQTAQQKAGGDQKEYKSETIEGGAQVLEQANLVVIVPGYGMAVAQAQHKVRELYDQLK
                     KRGVTVKFAIHPVAGRMPGHMNVLLAEADIPYTDLVEMDEINPEMPQCDVALVVGAND
                     VVNPAARTDRSSPIFGMPIIDADKARTVFAIKRSKNPGFAGIDNELYFSERTWMLFGD
                     AKNVVGELVKQLSGGSGLH"
     gene            complement(4040..4354)
                     /locus_tag="VFD73_22090"
     CDS             complement(4040..4354)
                     /locus_tag="VFD73_22090"
                     /inference="COORDINATES: protein motif:HMM:NF024179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HZI76664.1"
                     /translation="MTQPLDFWSMMFVFVLASFIGVGVIRRVSRLLHTPLMSITNAIS
                     AIAVVGSIIVTGADYPRNIRILGAVALFASMTNIVSGFLITDRMLKMFKSERKPGSNG
                     RP"
     gene            complement(4351..>4815)
                     /locus_tag="VFD73_22095"
     CDS             complement(4351..>4815)
                     /locus_tag="VFD73_22095"
                     /inference="COORDINATES: protein motif:HMM:NF013430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76665.1"
                     /translation="GGYAKELTEEDRARQRELLAEQCAASDAIITTALIGGVFAPKLI
                     SRDMVRSMKPGTVLVDLAADGGGNCELSRPGETVRVGGVTILAPLNLPATMPLHASLL
                     FSRNLTAFLQAFTKDRTFQLDLTDDIQQGSVITHDGVVKHARTGEALQKAGT"
BASE COUNT          945 a         1515 c         1446 g          909 t
ORIGIN      
        1 aaatggagca gggtgtactc gaccaccgcc tgcggcacca catggactcc aggcatcgta
       61 tcgccccgca cgaagacctg ccccagcaca ttgggcgtcg cgaatggtcg tcccgccgca
      121 gtatccatga tgagatacca cccggcggca acgacagcac ccaccactcc ggtcaggagt
      181 ccctcaccca cagtccggtg ttcccgctga tccatgatca ctccccttgt caatgtcaaa
      241 ccggcacgat agccgcaagt tcaggcgagg gaatactcag ggatgtgtcg gcggtcactt
      301 ctcaggaggt gaagcctcac ggcaacgatc acacgggcac agacggagca ggtggtcgta
      361 agtatagatc ccggtgctgt gtccatcgct ccattgaact ctcaagccgt acgcacctac
      421 cagagccacc gacaggggcc ggatgtcggc agcgattttt acgggatcga gcagggcctg
      481 tccggtcatc tcctcgacac agccggcaca gggacatgcc agccggagat cgcgggctac
      541 gtagaacgcc tggtgtccat ccgtatccca ttcaatcagg atcccatcgt ctcggcgggt
      601 gatcgcgtag ggtggtggaa ccggcatctt cattctcggt gagctggcat gggtaccaag
      661 aagaaaccct ccgggagacc ggagggtttc cgatgtgaac cacacctcgg agtcgatcag
      721 gctacgagat cacgcaatcg atcgcccgtt tcaccctcgc gaagccggag cagcgcccga
      781 tcgcgcagct ggcggatgcg ctcgcgggta acccccatca ttctgccgat ttcctcgagg
      841 gtccggctgt tgccgtcatc gagaccaaag tagagccgca gaaccttggc atcgcgcgga
      901 ggaagtgccg ccagtgcggc ctcgatatca cgagtttggc tgttggccat cgtcgtcata
      961 tcggtgcttt cctgctcgcc gctgctgaac cgctcgatcc gttcgttacc ttcgccgtcg
     1021 cgagtgggat gatccagccg gactgcctct gaattgagtg cgctcagcga gcggaccgcc
     1081 tcgaccgtga ggcccgtagc gcgggccagc tcctcggtgg tgggcatccg ccccagccgg
     1141 tccttcagca gggtggtggt ccggccgagc cgactcagat cggcggtgcg gttgagcggc
     1201 acccggacag ggcgtccgtg ccgcgcaatg gcggcctgga ctgcctgtcg aatccaccac
     1261 acggcatagg agatgaactt gacgccgcga tcggggtcga actttcgggc cgcggtcata
     1321 aggccgaggt tgccttcgcc gatcagatct accagcggca ctccccggtt ctggaacttc
     1381 ttggccacgg aaaccacgaa cctgacgtta tggcgcgcca accgctcctg agccgccaca
     1441 ttacccttga atgccttccg ggccagctcc atctcttctt cccggttcag cagaggcacc
     1501 cggctgatct cgtccagata cagatcgaga ctctcgcgac cttcgtcgat tgcacgcgcg
     1561 atttgcgccg gtcgcaccgg gcgacgcttg ctacgtgcct tgattgtcac gctactagcc
     1621 tcctaggaca cccgtgtcct gctcggtgaa cagccacgac tgaggccgag ccaaagtttg
     1681 caagggcgcc aatatacaac ctaagatacg gaaaatcaac accttagata aagcgcggcg
     1741 ggacggagag ttgcaataca cgggtgggaa ccgctgccgg agcaagtttc cgcagcgaac
     1801 attcaacggc cggtgacgac agcttcggca gggagagccg attctgttca actctgaaac
     1861 gtctaagcta cttactctta ttcttctcta tttcctcctt catcttctga gccgccgctg
     1921 ggttggccat catcgccttc atgtccaccg gctcctcgct gatcaagttc ttctcccctg
     1981 ttccgcgagc ggtgagaagc atcgtcttgc cttccttggt ggtcatcttg acgatgtgcc
     2041 acagcggcgc atccaaggag gcccaggtgt ctccatcctc cccgtggtaa tgccgggtct
     2101 tgaaggtgcc tgcaggcacg gtcaccgatt cctcgccgac gaaggtggat ttagcgcaga
     2161 actcccgcca atccgcatcg gaagcgggtg accggctcat gaaccctcca ctcattttca
     2221 tggcgggctg gtcacccatc ttcatgacga cctccgccgg cttgggcgag cgtagcgagc
     2281 tggcgtccca gggagtgagc atctggacga tggtccgctt gcctttggca tccatcgtgg
     2341 cttgcaacca gtacatctgc ttcccttccc gacgctccgc cttgatcacg cccatcctca
     2401 tgtggtcggg gccttggttg tccttggaat cccaggacat ttccgcccat tcgcccacca
     2461 ctgggggatg cgcgaaaaac ttgggaacgt cggcacaggc tccttgagca gcggcaacgg
     2521 aaggggaaac tgccggcagc aggagcgcga gccacaggta acgcatgggc aactctcgtc
     2581 ggggatgaat cgaacttagc gcccggtccc aagggcgcaa tccatacggc ggctcagtgg
     2641 agcccgcttc caccggacag ctgtttcacc agctcgccca ccacgttttt ggcgtctccg
     2701 aagagcatcc aggtccgctc cgagaagtac agctcgttgt cgatgccggc aaagcccggg
     2761 ttcttgcttc gtttgatcgc aaagacggtc cgggccttgt cggcgtcgat gatgggcatt
     2821 ccaaagatgg gactgcttcg gtcggtgcgg gcggccggat tcaccacgtc gttggcacca
     2881 accacgagcg cgacatcgca ctggggcatt tcgggattga tctcgtccat ctcgaccaga
     2941 tcggtgtaag gaatgtcggc ttcggcgaga aggacattca tgtggcccgg catccgtccg
     3001 gcgaccgggt ggatggcgaa ctttacggtg accccccgct tcttcagctg gtcgtagagc
     3061 tcgcggacct tgtgctgcgc ctgggcaacc gccatgccgt atcccggcac gatcaccacc
     3121 aggttggctt gctccagcac ctgggctccg ccctcgatcg tctcggactt gtattccttc
     3181 tgatcacctc cggccttctg ctgcgcggtc tggccgaacg cgccaaagag gacgttgacg
     3241 aatgaccggt tcatcgctcg gcacatgatg atggccagga taaggccgct cgagccgtcg
     3301 agcgctcccg cggtgatgag gagcttgttg tccaggacga accccatcgc gaccgccgac
     3361 agcccggcat acgagttcag aatcgcgatg accgtcggca tgtcggcgcc gccgatggga
     3421 atgatgagga gaacaccgaa aatcagcgcg agaacgatga tcaccgggaa cagaccggga
     3481 gcccagctgg cagccgggtg catggtcaga aagacaccga cgacgatcgc cagggcgaga
     3541 agggcgaggt tactgatgtt ctgcagggga taggtgaccg gacgctgggg gatccatttg
     3601 acctcctgca gcttgccggc cgccatgagg ctcccggtga aggtcagaaa tcccagcagc
     3661 acctcgacga tgatcgccac catccgaaag gtggtgagat tctccggtcc ttccgaggcc
     3721 cacaggtaat acttcgcagt tccgaccagc cccgccgcca gcccgccgaa ggcatgagaa
     3781 agcgcggtcc gctgcggcac ggcggtgagc ggcacccggg agagcggaat accgacgacg
     3841 aagccggcca gaatggcgag cacgatccag acgtgatgaa tgacttcggg ttgggcccag
     3901 gtgaccacga tggcgatggt catcgcggcg acgccggcgt acacgccttt cctggcggtc
     3961 gccggggtgt tcatccaatg cagcgcgaag atgaacagcg cagtggcgat cagataagcc
     4021 agctgaatga tgccgtggct catggacgac cgttggaccc gggtttgcgc tcggacttga
     4081 acatcttgag cattcggtcg gtgatcagaa atccgctcac gatgttggtc atcgaggcga
     4141 acaatgccac cgcgcccaga atcctgatgt tcctcgggta gtccgcccca gtcacaatga
     4201 tcgagcccac gacggcaatc gccgagatgg cattggtgat ggacatgagc ggagtgtgca
     4261 ggagccggga gacccggcgg atcactccca cgccgatgaa cgacgcgagc acaaacacga
     4321 acatcatcga ccagaagtcg agcggctgag tcatgttcct gccttctgta aggcttcgcc
     4381 ggtgcgggca tgcttgacca caccgtcatg ggtgatgacc gatccctgct gaatgtcgtc
     4441 ggtcaagtcg agctggaagg tacggtcctt ggtaaaggcc tggagaaacg ccgtgagatt
     4501 gcgggagaac agcagactgg cgtgaagcgg catggtcgcc ggtaggttca agggcgccag
     4561 gatcgtcaca ccaccaactc taaccgtttc ccccggacga gacagttcac agttgcctcc
     4621 cccatccgcc gccagatcca ccagcacggt cccaggcttc atcgatcgaa ccatgtctcg
     4681 cgagatgagc ttgggcgcaa agaccccacc gatcagcgcc gtggtgatga tcgcatccga
     4741 agcggcgcac tgctccgcca acagctcgcg ctggcgggcc cggtcttctt cggtcagctc
     4801 cttggcgtag ccgcc
//
LOCUS       DASRPQ010001946         1146 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_535715, whole genome shotgun sequence.
ACCESSION   DASRPQ010001946 DASRPQ010000000
VERSION     DASRPQ010001946.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_535715"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..233
                     /locus_tag="VFD73_22100"
     CDS             <1..233
                     /locus_tag="VFD73_22100"
                     /inference="COORDINATES: protein motif:HMM:NF017757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HZI76666.1"
                     /translation="RPLVDRLKATKIHHLKELRPGSKGRSEIRIIFAFDPTRSALLLL
                     GGDKAGNWARWYRDNIPLAEQLYIDYTADEEE"
     gene            236..583
                     /locus_tag="VFD73_22105"
     CDS             236..583
                     /locus_tag="VFD73_22105"
                     /inference="COORDINATES: protein motif:HMM:NF025120.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI76667.1"
                     /translation="MPKRTPQDWGLLEEELHAAGVTAEEIQAGARKLLAENRGHQLAE
                     TRKQLGLAQKDIAAALGVSIARISQIEHGEVTSFEVIARYVEALGGRLDLVADFGDRT
                     VRLPVSDTTATAA"
     gene            complement(916..>1146)
                     /locus_tag="VFD73_22110"
     CDS             complement(916..>1146)
                     /locus_tag="VFD73_22110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76668.1"
                     /translation="TSSMSRLRGHGRGNRSQSPRNGDGQRPNPGLLPTMLAVSSDAVA
                     LSLIAASQRGTGVRMRRAAAAVSWSRITWLVT"
BASE COUNT          238 a          370 c          348 g          190 t
ORIGIN      
        1 gccgaccgct ggtggaccgg ctcaaggcca cgaagatcca ccatctcaaa gagctgcggc
       61 ctggatcgaa gggacgatcg gagatcagga tcatcttcgc cttcgacccc acccggtcag
      121 cgctgctgct cctcggcggc gataaggcag gcaactgggc acgatggtac cgcgacaaca
      181 tcccgctggc cgaacagctc tacatcgatt acaccgctga cgaagaggaa tgaccatgcc
      241 gaagcggacc ccgcaggact ggggactcct ggaagaagaa ctccacgcgg cgggcgtaac
      301 tgccgaggag atccaggcgg gagcgcgcaa gctgcttgcc gagaaccggg ggcatcagct
      361 tgccgagact cgtaagcaac tcggcctcgc acagaaagat attgccgcgg cgctcggggt
      421 aagcatcgcc cgtatctctc agatcgaaca cggcgaggtg acctcctttg aggtcatcgc
      481 ccgctacgtc gaagcgctcg gcggtcgcct ggacctggtc gccgactttg gcgaccggac
      541 cgtgcgacta ccggtcagcg acaccacagc caccgccgct tgacatctgc gtcatcttgg
      601 ccagccatcg ttcccgggtg tcgcgctcac ccgatttcga ggaaccaagc cgtcaccgac
      661 tcagatcgcc atgcgccgct gctccatgtt ttgagtgagt ccggaagtca gtgacgaacc
      721 aagtgacaac gccctcaaac cccggcaggc ggtgccggac ccagccagac aagatcgttg
      781 ccctgacgtg ccgtaacgcg acccaactgg acgcggccag acgaaactgg catgcatggt
      841 aaggagaagg tctacggttc gattccgtaa cagggctcca gctcagagat gtttttcgaa
      901 catccggttc caagatcaag tgactaacca agtgatgcgg ctccagctga cggcagccgc
      961 agcgcggcgc atccggacac cggtgcccct ctggcttgcg gcaatcagac tcaatgcgac
     1021 ggcgtcggac gaaaccgcca gcattgtcgg gagaaggcct ggattcggcc gttgcccgtc
     1081 tccgttgcgg ggagactggc ttcggtttcc tcggccgtgc ccgcgcagtc ggctcataga
     1141 gctcgt
//
LOCUS       DASRPQ010001947         1366 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3989879, whole genome shotgun sequence.
ACCESSION   DASRPQ010001947 DASRPQ010000000
VERSION     DASRPQ010001947.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1366
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3989879"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..204)
                     /locus_tag="VFD73_22115"
     CDS             complement(<1..204)
                     /locus_tag="VFD73_22115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76669.1"
                     /translation="MTSIHARQTETSAGQMESPSDGRTGNNIPISAEAAGQLAVALDA
                     SAEGGLPPGINFMIRDEPGYRIAL"
     gene            complement(715..>1366)
                     /locus_tag="VFD73_22120"
     CDS             complement(715..>1366)
                     /locus_tag="VFD73_22120"
                     /inference="COORDINATES: protein motif:HMM:NF019984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="group II intron maturase-specific
                     domain-containing protein"
                     /protein_id="HZI76670.1"
                     /translation="DEPRDSSPVLRAAGVRFPPPTLLIVMCWSRSQAEAALARLTDLL
                     AGLGLEPKAAKTRIVHLEAGGEGFDFLGFHHRMVRSRGLHGKKPVAFLARWPSDKAMQ
                     QARDRIRELTRRSRLLLAPEWIAEDLNRFLRGWAAYFRFGNSADRCGKIRRYAQMRMA
                     LFIAKRSRRSRKFGWAVLVCRSPDQLGLITLSGIVVDPRPFRDWRGRPNAGGERRR"
BASE COUNT          211 a          447 c          431 g          277 t
ORIGIN      
        1 cagagcaatc cgatatccag gctcgtcgcg tatcatgaaa ttgatgccgg gaggtagccc
       61 tccctccgcc gaggcatcca gtgccacggc gagctggccg gcggcttcgg cgctaatagg
      121 tatattattt ccggttcttc cgtcagacgg ggattccatc tgtccggccg aagtttccgt
      181 ctgtcgcgca tggatcgagg tcatgatttc tcctcgcagg catagggtcg cttattggct
      241 tattggctta ttgggatcct ccttgaggca gtaatatgca ggcggatctt catgctcggt
      301 tcgttcttcg ctcgtttcgc gaagaggtac ctccttggga gggctgtttc cgccgccgta
      361 gaggacaagg cccccagacg gcgggcccct tcggcgcggc cgctctatgt acgagaatcg
      421 tcctgggata gtcacagcgg gatgttcgtg tgcgtcctta attccgtgga tgggccgtat
      481 gctcccatgc cgatagcgga tcgatagcgt gctgactaac gtcagctggg tcgcctttcc
      541 atcaagatgg tgtagggtcg gggactggcg cggttgctcg ctggctttag gtcctggggc
      601 cttcgtggcc gccggtttcc cggccggttg tgccactcca gtgtccttgg ccaggtctgc
      661 cccgtttcca gtccccgccc gtcgaaccgt gcatgcggtt ttcccgcaca cggctcaccg
      721 acgccgttca ccgccggcat tcggccttcc ccgccagtcc cggaagggcc tgggatcgac
      781 gacgattcct gacaaggtga tcagtccgag ctggtccggg gaccggcaga cgaggaccgc
      841 ccagccgaac ttccgggacc ggcgggagcg cttggcgatg aacagcgcca tccgcatctg
      901 cgcgtatctc ctgatcttcc cgcagcggtc cgcggagttg ccgaaccgga agtacgcggc
      961 ccagccgcgc aggaaccggt tcaggtcttc cgcgatccac tccggagcca gcagcagccg
     1021 ggaccggcgg gtcagttccc tgatccggtc gcgggcctgc tgcatggcct tgtccgaggg
     1081 ccagcgggcc aggaacgcca ctggtttctt cccgtgcagc ccccgcgagc gcaccatccg
     1141 gtggtgaaag ccgaggaaat caaaaccctc gcctcctgcc tccagatgga cgatgcgggt
     1201 cttggccgcc ttcggctcca ggccaagccc ggccagcagg tctgtcagcc gcgccagcgc
     1261 ggcctcggcc tggctgcggg accagcacat cacgatcagg agagtcggcg gggggaatct
     1321 cacccccgcc gctcgcagaa ccggacttga gtctctcggc tcatcc
//
LOCUS       DASRPQ010001948         1389 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3042819, whole genome shotgun sequence.
ACCESSION   DASRPQ010001948 DASRPQ010000000
VERSION     DASRPQ010001948.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1389
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3042819"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1061
                     /locus_tag="VFD73_22125"
     CDS             <1..1061
                     /locus_tag="VFD73_22125"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZI76671.1"
                     /translation="RRIVTRIGIYARVSTQRQAQANGLAQQLERLQAHALQQGWSVAA
                     EDIFRDDGYSGARLKRPGLERLRDRAAMRQLDCILITAPDRLARNYVHQVLLLEEISA
                     TGCQVQFLDRPMSQDPHDQLLLQIRGAVAEYERSLIAERMRRGRLRKLQAEILLPWTK
                     PPYGYRVDPDHPRDPAGVRQDPTEAAAVAEMFVWYAEEGRSLYRLAQKLHQDGVTPPR
                     VQGRWNVQTLRGILTNPVYAGEVYAGRLQEACGTGATATPRRVRPREDWIMVASIPAI
                     VTQEQFERVQDKLAQNRQFARRNNTAHAYLLRALVSCGVCGLACQGRCLPSGYRYYCC
                     RGKLSALHAHRQTKCPSR"
     gene            1077..>1389
                     /locus_tag="VFD73_22130"
     CDS             1077..>1389
                     /locus_tag="VFD73_22130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76672.1"
                     /translation="MDALVWEDLCRLLNEPEAIRFALERAHGGHWLPQDLQARRQALR
                     RGQASVQQQMERLTEAYLASIVSLEEYRRRRLDLEQKAQSLAAQVQQLEGQVDRQGEV
                     AR"
BASE COUNT          246 a          444 c          473 g          226 t
ORIGIN      
        1 agaggaggat cgtcacgagg atcgggatct atgcacgggt atccacccag cgccaagcac
       61 aggccaacgg cctcgctcag caactggagc gcctgcaggc ccatgccctc cagcaggggt
      121 ggagcgtggc ggccgaggac atcttccggg atgatggcta cagcggtgcc cgtctcaaac
      181 ggccgggctt ggagcggctg cgagatcggg cggcgatgcg tcaactggat tgcatcctga
      241 tcaccgcccc ggaccggctg gcccgcaact atgtgcatca ggtactcttg ctggaggaga
      301 tctcggccac aggctgccag gtccagttcc tcgaccggcc gatgagccag gatccacacg
      361 accagctcct gctgcagatc cgcggcgcgg tggccgaata cgagcgcagc ctgatcgcgg
      421 aacggatgcg ccgtggccgt cttcgcaagc tgcaggccga aatcctgctg ccctggacga
      481 agccgcctta cggctaccgt gtggatcccg atcacccccg tgacccggct ggcgtgcgcc
      541 aagacccgac cgaagccgcc gcagtcgctg agatgttcgt ctggtatgct gaggagggac
      601 gcagtctcta tcgcctggcc cagaagctgc accaggacgg ggtgacgccc ccgcgggttc
      661 aggggcgctg gaacgtgcag accttgcgcg gcatcctgac caacccggtc tacgccggcg
      721 aggtctatgc cgggcgcctc caggaggcgt gcggtaccgg cgcgacggct acgccccggc
      781 gagtgcgacc gcgggaggac tggatcatgg ttgcgtcgat cccggccatt gtcacccagg
      841 agcaattcga acgcgtgcag gacaaactag cgcagaacag gcaatttgcg cgtcgcaaca
      901 atacggctca tgcctatttg ttgcgtgccc tcgtcagttg tggcgtgtgt ggcctggcgt
      961 gtcaggggcg ctgtctgccg tcgggttatc gctactattg ctgtcgcggc aagctatcgg
     1021 cgcttcacgc ccatcggcag acgaagtgcc cctcccgcta gatcccgaca gagcaggtgg
     1081 acgcgctggt ctgggaggat ttatgccggc tgctcaacga gccggaggcg atccgctttg
     1141 cgctcgagcg ggcgcatggc ggacattggc tgccccagga tctgcaagct cgccggcagg
     1201 cgctgcggcg cggacaagcc agcgtccagc aacagatgga gcggctcacc gaggcctacc
     1261 tggccagcat tgtgagcctt gaggaatacc gtcgacggcg tctcgatctg gagcagaaag
     1321 cgcagagcct cgccgcccag gtgcagcaac tggagggtca ggtcgaccgc cagggcgagg
     1381 ttgcgcgcg
//
LOCUS       DASRPQ010001949         1122 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3698301, whole genome shotgun sequence.
ACCESSION   DASRPQ010001949 DASRPQ010000000
VERSION     DASRPQ010001949.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3698301"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          199 a          337 c          355 g          231 t
ORIGIN      
        1 cagcggcggg aatggcctgc tggtactttc cccgggcgca gatcgccacg atgccggaat
       61 cggcgtagtc gatcttcctc acggtcaccg tgacgccaag gaccctcgtc tcgaacggca
      121 ccgccagatt gtccccgatc atcgtggcga acccggtcag ctcctcatcc tggttgtagc
      181 aatcgaccgt ggcctgggca tcaggccgtc cagttcctcc tcgctcggct cgttcatggc
      241 cgcagcatag aacgccccgc ctgtccggcg cgggagtcag gccgggcagc ggccctggcg
      301 tcagcttgac gtgacaaggg catccgggag ctggcgtcag tcggctgcgt gacgctgcgt
      361 cacgtccatc ggctgagata acgcacgcgg agccgtcgtt agatgcggac agggagtcgt
      421 caaggtggcc atcggagggc gctctgaaac gggtgatctg tgctgctagg cgcgggcctc
      481 agagtgctgc caacgttcgc ttctgccgat gagcgggcac ttcggctgta ttgcatgtgt
      541 ttatatggca agcgagaatc tcgcggttat gatgtcagtc attatgcaca tggccacccg
      601 gcaagcataa ctttaggcaa atcggactat ggtatttagt atgcagtatc cggtgtcggc
      661 ggcagggttt cgtcttctgc ataacctgcc tgctggcgac gccatcccgt ggtcgacggg
      721 gcgcacgatc aagccgcccg cggtgctctt ctgctaccca ttacgatcgc ttgaccagct
      781 gcccgcgcaa gcctattgtc caggtagggc cgggtttcca tgcgttgcgg cagtaaattc
      841 ctgggctcga tgtcctgcgg gccagtgctt gcatcctcgg gaggacagaa cgcgatgcca
      901 atcgatggcg cactgctttc tagatcgaag tgttattttg ccggtgactg agcggaggac
      961 cagtggccgg gaacaacttg accgatgtag gcgggaagct ggacgcggcc cgcatcaaga
     1021 tcaccgcccc tggtctcaac ggaagccctg agttgctcgg ggacaaactc gagttgcgca
     1081 cacccggcgg ccagttgttc cacaacgcgc tggcgaactc tg
//
LOCUS       DASRPQ010001950         1123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2769997, whole genome shotgun sequence.
ACCESSION   DASRPQ010001950 DASRPQ010000000
VERSION     DASRPQ010001950.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2769997"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          200 a          377 c          365 g          181 t
ORIGIN      
        1 ccgatctcgg tcgctcgcga gcccaaggcg ggcctccctt aatggctgag gccgatcatc
       61 cgcctgtcca ggccggaagt caatctcctg agcccccgac ctacagccga gagccgggag
      121 acaggggctc gcagtcgggc acggactgaa ggcggcccca ttgcgggacc gccttccgac
      181 atacggcacg gtgccagagg gtgtgctcaa cgagcagccc ggcccctgcg gctaacagat
      241 ccgggtaacc ctcgacgcgc ggatcatctg gctggaaggc acgaccggcc tcacccacgt
      301 gggggacgct gcggccaaga cgccgcaaac tcatacggga atcacaccgg cgcgttcgca
      361 tcttcgagaa aagaaaagcc ccccgacggg ggcgccgagg ggcttggaag caacggggag
      421 cctgtgagga gggggaactt ctcaggggga ctcctcgccc ggccagtaaa tcaactctgg
      481 actctccagt acgggccggc cgtcctagac tcagcgtgtg aaggccgagc aggctctcat
      541 tccgatctgc atcgagtgcg gtttggtgtg gtggccggac aaccaggatc gtttcgcggc
      601 tctcctcacc gacgatgagc cgcctgagct ggccttctac tgctccgagt gcgctgagcg
      661 cgaatttagc tccgagtagc tgagaaggcg cggcagggtg accgggttcg cgtagccagc
      721 cctccccgaa ggggcgtacg cgccagtcca cagccacacc ccctgccgcg acccgacagt
      781 gcccttcttt gcgacaaggg aaactcggag cgtctgagtc agccggagcc aggcgacctc
      841 cgtcgtcagg tggggcgggt gggccgccac ccagcgcccc gggaagccgc ccggcccctc
      901 atctcggtag atgcggctct ggctcagaac ctgtgttgag ccaatacgac accagctatc
      961 ggggagtccc gtgatccgcc gatatcagct ggtcagacgc ccaccctccg ccgatgaagc
     1021 tgttctctta ctggtcgccg ctgtcgctga tggggtgcgt cggtttaggc caagcctgaa
     1081 gtcaggcctg ggagcgcgga tctgtctccc gcgcgacctc ctc
//
LOCUS       DASRPQ010001951         1372 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_234310, whole genome shotgun sequence.
ACCESSION   DASRPQ010001951 DASRPQ010000000
VERSION     DASRPQ010001951.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1372
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234310"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            253..>1372
                     /locus_tag="VFD73_22135"
     CDS             253..>1372
                     /locus_tag="VFD73_22135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76673.1"
                     /translation="MPTRGRRRQVDTSTHFCPNPDCTYRGWVGWGNLRANGHPSGGPW
                     RQLLCVVCRHYFLETLGTLFHGKRASGDLIVRVITCLAEGLGIRGTARVFEVDPNTVL
                     QWLVEAADHLQAFSRHVLHDVRVRQVQLDELFALLSAVKEGEVSEAEAIERLERSPQW
                     VWAAMDPESKLLLTIDVGDRTLAMAQRVVHQVVQVLAPGCVPLFLTDGFKEYATALLT
                     HFGQWVQPLRRQDKGPAPKPRWLPLPGLPYAQVVKTVRRRRLVAVQHRVVFGSLEAVN
                     HLLAPLGRHINTAFVERLNLTIRQHVAAVGRRVSTLCKGEDGLRQQLVLFHAYHNFCL
                     PHASLRVPLAAPLPTNGTGSATLWQPRTPAMAAGLTDHV"
BASE COUNT          209 a          483 c          432 g          248 t
ORIGIN      
        1 atggtctctc atcttttctt ctaccagctc acgcggatcg cactcgtctg gctgtgcgtc
       61 atgctccagt gggtggggtc cagcgacccc accgccgtgt gtccgacgac accggagccc
      121 acaccctcac cgccaaagcg ccaccgtgcg ccgaaaccct ttgcaggctt cctcaaaaag
      181 ccacactgcg acgcctgtga gcacgcccgt gccccccatc cgcaagcccc ttccgctccg
      241 ccatcacgca tcgtgccgac gcgagggcgc cgccgccagg tcgacacctc gacgcacttc
      301 tgcccgaacc cggactgtac ctatcgaggc tgggtgggct ggggcaatct ccgcgccaat
      361 ggccatccca gtggtggtcc ctggcggcag ctgctgtgtg tcgtgtgtcg ccactacttt
      421 ctggagaccc tcggcaccct gttccatggc aagcgcgcct ctggcgacct catcgtgcgg
      481 gtcatcacgt gcctagccga ggggctgggc atccggggta cggcgcgcgt cttcgaggtc
      541 gaccccaaca cggtgctgca gtggctggtc gaagcggcgg accaccttca ggcgttttcc
      601 cgccatgtcc tgcacgatgt gcgggtccgg caggtccagc tcgatgagtt atttgccctg
      661 ctcagcgcgg tcaaggaggg tgaggtgagt gaggcggagg ccatcgagcg tttggagcgt
      721 tcgccccagt gggtctgggc cgcaatggac cccgagagta aactgctgct gaccatcgac
      781 gtcggggacc ggacgctggc catggcgcag cgcgtggtcc accaggtcgt gcaggtactg
      841 gcgcccggct gcgtgccact cttcctgacg gacggcttca aggagtacgc caccgcgctc
      901 ctcacccatt tcggccagtg ggtgcagcca ctacgccgcc aggacaaagg gccagcaccc
      961 aagccccgct ggctgccgct gcccgggctg ccctatgcgc aagtggtgaa gaccgtgcga
     1021 cgccggcgcc tggtcgccgt gcagcaccgc gtggtgtttg gctccctgga ggccgtcaat
     1081 caccttctgg cccccctggg tcggcacatc aacaccgcct tcgtggagcg cctcaacctg
     1141 accatccgcc agcatgtcgc ggccgtcggc cgccgggtga gcacgctgtg taagggggag
     1201 gatggcttgc ggcagcaact ggtactgttc cacgcctatc acaatttttg tctgccgcat
     1261 gcgagcttgc gtgtgcctct ggctgcgcct ctaccgacca atggcacggg ctccgccacg
     1321 ctgtggcaac cgcggacacc ggccatggcg gcgggactga cggaccacgt ct
//
LOCUS       DASRPQ010001952         1093 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4293794, whole genome shotgun sequence.
ACCESSION   DASRPQ010001952 DASRPQ010000000
VERSION     DASRPQ010001952.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4293794"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..470)
                     /locus_tag="VFD73_22140"
     CDS             complement(<1..470)
                     /locus_tag="VFD73_22140"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI76674.1"
                     /translation="METERLILRPFNADDFDDLYAYQSRPDVARYLHWEARDRAQVRQ
                     ALAEQCAETTLDAEGKWLTFAVVWREVRTVVGEIGLKWLSRQNRQGEIGFVFNPDYHG
                     RGLATEAAEAMLALGFGSLGWHRIIGSCDVRNHASARLMERIGMRKEAHFIHSE"
     gene            complement(430..>1093)
                     /locus_tag="VFD73_22145"
     CDS             complement(430..>1093)
                     /locus_tag="VFD73_22145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76675.1"
                     /translation="WASSGGGPYALAAAATMPDAIVAVCVFASVGPYGEPGLDFAEGL
                     GEGMRETIQRFFEEPERARAEFRAQSAITLAERGSPEWWLRSWGDRAEQDAAHSREWA
                     EYLAACTRDLLRADDRGSFDDEGSWDDDSAFYLPWRFDLADIRAPVSLWHGLKDFVPV
                     AHARWLAERIPHVTTHFPADEDHTNIEENNRAAAYAWLKDQVYRHGHHGDRAADPAPV
                     QC"
BASE COUNT          188 a          362 c          353 g          190 t
ORIGIN      
        1 aactcggaat ggatgaaatg tgcctcctta cgcatgccga tccgctccat gaggcgggct
       61 gaggcatggt tgcggacgtc acaagagccg atgatacggt gccacccgag gctgccgaat
      121 cccagcgcaa gcatggcctc ggctgcttcg gtggccaaac ctcgcccgtg gtagtcaggg
      181 ttgaagacaa agcctatctc tccctgacgg ttctgtcggc tgagccattt aagcccaatc
      241 tcgccaacta ccgtccggac ctcacgccac accaccgcga acgtcagcca cttgccctcg
      301 gcgtcgagtg tggtctctgc gcactgttcc gccagggcct gccggacctg ggcacgatcg
      361 cgggcctccc agtgcagata ccgggctacg tccgggcgag attggtaggc gtacaggtcg
      421 tcaaaatcat cagcattgaa cgggcgcagg atcagccgct ctgtctccat ggtggccatg
      481 ccgatagact tggtccttga gccaggcgta ggcggcggcg cggttgttct cctcgatgtt
      541 ggtatggtcc tcgtccgctg gaaagtgggt ggtgacgtgc ggtatgcgct ctgccagcca
      601 gcgggcatgg gcgaccggga cgaaatcctt cagcccgtgc cacaggctga cgggagcacg
      661 aatatcggcg aggtcgaacc gccaggggag atagaaggcg ctgtcgtcat cccaggaccc
      721 ttcgtcgtcg aacgagcccc ggtcatccgc gcggagcagg tcccgtgtgc aggccgcgag
      781 gtactcagcc cactcgcggc tgtgggcggc gtcctgttcg gcacggtcac cccagctgcg
      841 cagccaccac tctggtgagc cgcgttccgc gagggtgatc gccgactgcg cgcggaactc
      901 ggctcgtgcc cgctcgggct cttcaaagaa cctctggatc gtttcgcgca tcccctcgcc
      961 gaggccttcg gcgaagtcga ggccgggctc cccgtaaggc ccgaccgagg cgaagacgca
     1021 cacggccacg atggcgtccg gcatcgtggc cgctgccgcc agggcatagg gcccgccacc
     1081 cgaagacgcc cat
//
LOCUS       DASRPQ010001953         1235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3698813, whole genome shotgun sequence.
ACCESSION   DASRPQ010001953 DASRPQ010000000
VERSION     DASRPQ010001953.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3698813"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(217..690)
                     /locus_tag="VFD73_22150"
     CDS             complement(217..690)
                     /locus_tag="VFD73_22150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76676.1"
                     /translation="MDAVSGPAEWLAWWSWPWRAAGAGVSSFPSLAPQALSQPILPGW
                     LFANSINVTEENSSSPETEREIVAAHSYGQQLGRIMDILDELIRKQPAGSLGARPVRE
                     FAELRDDIDTIKARQAAKRAEQMISDLAAMKRRDPDEYQRLAAELRKVLEKDSGD"
     gene            complement(810..>1235)
                     /locus_tag="VFD73_22155"
     CDS             complement(810..>1235)
                     /locus_tag="VFD73_22155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76677.1"
                     /translation="RARAGTLASASARRRVAGGAVERAVRETVSFYRDAIGLPFWRPS
                     AIAMAWTGPSSGCRAARFTWRSSGPGRRRTRAAGWTSWCSACLILPPGERMQARLAAA
                     GACPVAQIGYWQANGGVTYRDPDGREVVFASWIYVPPGS"
BASE COUNT          230 a          443 c          349 g          213 t
ORIGIN      
        1 cccaagaaga cacttacccg ttaggactca gttctgacac cggcgaccga ccctgtccgc
       61 gtcagaagag tgtcttcgtt ggtctgtcat acagccttat ctcgactgca attcacgtgt
      121 tagctcgccg gatgcccttc ggggattaca tgccgagatt ccaggacgaa ctagcattcc
      181 ctgaattgag ccgtcccagg cgccgggcgc tggccttcaa tctccgctgt ctttttccag
      241 aaccttccgg agttccgctg ccaggcgctg gtattcatca ggatcacgcc gtttcatcgc
      301 agccaggtca ctgatcatct gttccgctcg cttcgcagcc tgacgggcct taatcgtgtc
      361 gatgtcatct ctcagctcag cgaactcccg gacaggccgg gcaccaagtg acccggccgg
      421 ctgcttcctg atcagttcat caagtatgtc catgatacgg ccaagctgct ggccataact
      481 atgcgccgca acgatttccc gctctgtctc cggtgagctg gaattttcct cagttacgtt
      541 aatgctattc gcaaagagcc agccgggaag gatcggctga ctgagcgcct gcggagccag
      601 cgagggaaac gaactgaccc cggcgcccgc agcgcgccac ggccaggacc accatgcaag
      661 ccattccgcc gggccggata ccgcatccat gaacccacga tacgctcgcc tgcccgaggc
      721 cagcgcccgg gaaggcctgt aagcagcagg ccgtccggcc tgtgcggaca ttccgggcgg
      781 cattacacca ccccaagccc gcgcaccgat cacgatcctg gcgggacata gatccaggat
      841 gcgaacacca cttcccgccc atccgggtcc cggtaggtga caccgccgtt agcctgccaa
      901 tagccgatct gggcaaccgg gcaggcaccc gcggcggcga gcctggcctg catccgctcc
      961 ccgggcggca ggatcaggca ggcagaacac cagctggtcc agcccgccgc ccgggtacga
     1021 cgcctgcccg gcccggacga tctccaggtg aacctggccg cccggcagcc cgaggatggt
     1081 cccgtccacg ccatagctat cgcagaaggt ctccagaacg gcagcccgat ggcgtcccgg
     1141 tagaagctga ccgtctcccg taccgcgcgc tccaccgcac cacccgcaac gcgcctgcgg
     1201 gcagatgcgc tggccagcgt gcccgcccgg gccct
//
LOCUS       DASRPQ010001954         1241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4621301, whole genome shotgun sequence.
ACCESSION   DASRPQ010001954 DASRPQ010000000
VERSION     DASRPQ010001954.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1241
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4621301"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(185..1036)
                     /locus_tag="VFD73_22160"
     CDS             complement(185..1036)
                     /locus_tag="VFD73_22160"
                     /inference="COORDINATES: protein motif:HMM:NF013087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HZI76678.1"
                     /translation="MRGIRMLCDYLTVQGFLTKTQGRYGLTPATEVFLTTASPAWMGS
                     IVEFMAAPEMIALWLDDPVGYVRNGGAVGLGSIAPDHPVWVKFAKAMVPFMRPTAQAV
                     VQAVQDLPTLPKRVLDIAAGHCLFGITLAQAISGAEITAVDWPAVLEVAQENAKGAGV
                     ADRYRTIPGSAFEVDWGSGYDLVLLTNFLHHFDPSTCVGLLERTRNSLSAGGRVLAVE
                     FVPNEDRVSPPFPAMFAFMMLGSTPSGDAYTAREFDDMGRAAGFERVKVDPLPPTPQS
                     LVTFEQG"
BASE COUNT          236 a          401 c          407 g          197 t
ORIGIN      
        1 aatacaccga ccagcagaaa cgaaaggcgg aacacatcga ggagggctac gagcaccgtg
       61 gcaagtcgcc caaagaggcc gagcggatcg cttgggcgac cgtgaacaag caggatcacg
      121 gcggcaaaaa gggcggctcc ggccattagg cgtttgggcg gcgatgcgcc tgatcgaggc
      181 tgcctcaccc ctgttcgaag gtaacgagac tttgtggcgt gggcggcagg ggatcaacct
      241 tgacccgctc gaacccggca gcccggccca tgtcgtcgaa ctcacgagcc gtgtaggcat
      301 ccccgctcgg cgtggacccg agcatcataa aggcgaacat ggccggaaac ggtggcgaga
      361 cccgatcctc gttgggcacg aactccaccg caagcacccg ccctcctgcg ctcaggctgt
      421 ttcgggttcg ctccagcagg cccacacagg tgctcgggtc gaagtggtgc aggaagttgg
      481 tcaagagaac cagatcgtag ccgctgcccc agtccacctc aaaggcgctg cccggaatgg
      541 tccgatatcg atccgccacg cctgcgccct tggcgttctc ctgtgcgact tcgagcactg
      601 ctggccagtc caccgccgtg atctccgccc ctgagatcgc ctgggccaac gtgatcccaa
      661 acaggcaatg gcccgccgcg atgtcgagca cgcgtttcgg cagcgtcgga aggtcttgga
      721 cggcttgcac cacggcctgt gcggttgggc gcatgaacgg caccatggct ttggcgaact
      781 tgacccagac gggatgatcc ggggcgatgc tgcccagacc cactgcgccg ccattgcgga
      841 cgtagcccac cggatcatcg agccagaggg cgatcatctc cggcgcggcc atgaactcga
      901 caatgctgcc catccaggcc ggagaggctg tggtcaaaaa cacctcggtt gcgggtgtca
      961 ggccgtagcg cccctgggtc ttggtcagga agccctggac ggtgaggtag tcgcacagca
     1021 tgcggatgcc gcgcacggct gcgccggttc gggctgcgat gcggtcgagg tcaccgctgt
     1081 cctaggccac agccgtgaac aggtcgagcg ccaacgcggc tttgagcgcc gccgttttct
     1141 ggaagcccag cacggcatcc aggaacaggt ctggggtcgg ttcggcggcc atgggctgct
     1201 ccattgcgag ccgctcgcta ccacacgacg gggacgagcc t
//
LOCUS       DASRPQ010001955         1433 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3043826, whole genome shotgun sequence.
ACCESSION   DASRPQ010001955 DASRPQ010000000
VERSION     DASRPQ010001955.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1433
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3043826"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(475..714)
                     /locus_tag="VFD73_22165"
     CDS             complement(475..714)
                     /locus_tag="VFD73_22165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76679.1"
                     /translation="MPSHAKAREEGARAGPPLEFYRVAGFSVLHAFEETIFARVEEWY
                     RLPTTYHDGPACTSTPRQCSHHARRGVGAAGAGSI"
     gene            1007..>1433
                     /locus_tag="VFD73_22170"
     CDS             1007..>1433
                     /locus_tag="VFD73_22170"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HZI76680.1"
                     /translation="MTDRRKLPGRPEDEGQDSGRERISRAAYDLFSREGVRAVGVDAV
                     IARAGTAKMTLYRNFSSKDDLIIEFLRRREQLWTQDWLRTESTRRGHSPREQLLAIFD
                     VFSEWFGKPDFEGCSFLTTMIEVNDREHPVHQAAVGHLAN"
BASE COUNT          282 a          434 c          461 g          256 t
ORIGIN      
        1 agtgccagtg ggtatgccag gaccggaaac cgctcgcgcg ccgccgtttc gagccgaccg
       61 cccgcagccg acgcgatccc gccgacttga cggtgttgac cagcacccgg ccccacgacg
      121 gctgagaacg actggccggt ctcccacgcc cagccgacct cggcgcagca ccggcgctga
      181 gctggacatg aggaaatggc gcgtgattgt cttcccggcc cacacgaacc acccccaggc
      241 ggctgatgac actgccgcta tccagaacag cacagcacgg gaaatgacag gcctcaaccg
      301 aaatggccga attagttacg tttaatgtgc ccgtggctct gaccgacgga tttaccgttc
      361 cgaccgggta atcccggacg tatccatgcc acccagttgg tcggtcagct cgtcaacgcg
      421 aaggagcctg cagcggttct cgttcaccgc cagccccccg ctcccgggtg atgatcagat
      481 ggatccagcg cccgccgcac cgactcctcg ccgggcgtgg tgactgcatt gtcgaggcgt
      541 tgatgtgcag gcaggtccgt cgtgatacgt ggtcggcagg cggtaccact cttcgacgcg
      601 ggcgaagatg gtttcctcga aggcgtggag cacactgaat ccggcgaccc ggtaaaactc
      661 gaggggcgga ccggcgcgag caccttcttc ccgggctttc gcgtggctgg gcatctggcg
      721 gcgccatcga gcgtctgggg ataatcggcg aacgccggcg tcatcgcagt tgaggctaca
      781 ctggtagacg ggctggcgtg tccattcttt atccggaatc cggatgaaat ctcccgccag
      841 gagaatgcgt caggcgatgt gacagcggag gcaagcgata ggctccagga ttcacggcgc
      901 tgccatgaat tcggttcgat aattcttatg cttgtcgcac aaccaggccg gaggaagatg
      961 gtatactctc gtggattctt ccatgaagcg atgaggacgc gttgcaatga ctgaccggcg
     1021 gaaactgccg ggccgcccag aggacgaggg ccaggacagc gggcgcgaac ggataagccg
     1081 ggcggcctac gatctgttca gccgcgaagg cgtccgagcg gtgggagtcg atgccgtcat
     1141 cgccagggcc ggcacggcaa agatgacgct gtaccggaat ttttcatcca aggatgacct
     1201 gattatcgag ttcctgcgcc gccgcgagca gctctggacc caggattggc tgagaaccga
     1261 gagcacgcgg cgcggtcata gtccgcgcga gcagttgctg gcgatattcg atgtgttctc
     1321 tgagtggttc ggcaagccag acttcgaggg ttgctcattc ctcacgacaa tgatcgaggt
     1381 caatgaccgg gaacaccccg tgcatcaggc ggctgtcggg catctggcga ata
//
LOCUS       DASRPQ010001956         1008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_537211, whole genome shotgun sequence.
ACCESSION   DASRPQ010001956 DASRPQ010000000
VERSION     DASRPQ010001956.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_537211"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..798)
                     /gene="disA"
                     /locus_tag="VFD73_22175"
     CDS             complement(<1..798)
                     /gene="disA"
                     /locus_tag="VFD73_22175"
                     /EC_number="2.7.7.85"
                     /inference="COORDINATES: protein motif:HMM:NF010009.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA integrity scanning diadenylate cyclase DisA"
                     /protein_id="HZI76681.1"
                     /translation="MARSPEESLKATLGRVAPGTALRDGLERILRGRTGALIVLGSDR
                     TIDSICSGGFDIGIDFSPTRLRELAKMDGAIICDKDAGNILRAAVQLVPDPSIETQES
                     GTRHRTAERVAIQTGVPVISVSQSMQIIALYVNGLRHVLEGSEKVLARANQALATLER
                     YRSRLDQVTSSLSALEIEAMVTVRDVAVTLQRQEMVRRISEEISQYVLELGEDGRLLS
                     LQLDELTVGRGPGSDIIIRDYAGPKASPDDIDGAVSALLNLGPTELID"
BASE COUNT          172 a          316 c          336 g          184 t
ORIGIN      
        1 atcgatcaat tcggtggggc cgaggttgag gagcgcgctt accgcgccgt caatgtcatc
       61 cggggatgcc ttcggaccgg cgtagtcgcg gatgatgatg tcgctgcccg gaccgcggcc
      121 cactgtcagc tcgtccagct gaagggacag gagcctgccg tcttcgccca gctccagcac
      181 atactgcgag atctcctcgg agatccggcg caccatctcc tggcgctgca gggtcacagc
      241 cacgtcgcgc accgtcacca tggcctcgat ctccagtgcg gacagcgagc tggtcacctg
      301 gtccaggcgg gaacggtagc gttcaagggt agccagggcc tggtttgcgc gggccagcac
      361 cttttcggag ccctcgagca catgccggag tccgttaacg tacagggcga tgatctgcat
      421 ggactggctg accgagatca ccgggacccc ggtctggatg gcgacgcgtt cggcggtccg
      481 gtgccgggtg ccggattcct gggtttcgat gctcggatcc ggtacgagct gcacagccgc
      541 gcggaggatg ttgccggcgt ccttgtcgca gatgatggca ccgtccattt tggccagttc
      601 gcggagccgg gtcggtgaga agtcgatgcc gatgtcgaag ccgccggaac agatcgagtc
      661 gatggtcctg tcggagccca gcacgatcag ggcgccggtg cgtccgcgga gaatgcgttc
      721 caggccgtcg cgcagcgcgg ttcccggggc caccctcccc aaagtcgctt tgagcgattc
      781 ttcagggctg cgagccatag atattccctt caaaggtgca ggcggggcct gcaggtttgc
      841 cggttctcaa aacttcaccg gcaggatcaa aagtactcgg tttcccgcat gcaccatcct
      901 agaggtagat taccccagca tccgcacggg caagccttaa agtgccccgt cgggaccctg
      961 cggaccgggc atccggagtg catccgacgg cggccggctg aggggcac
//
LOCUS       DASRPQ010001957         1253 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3991350, whole genome shotgun sequence.
ACCESSION   DASRPQ010001957 DASRPQ010000000
VERSION     DASRPQ010001957.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3991350"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     regulatory      795..879
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
     gene            1025..>1253
                     /locus_tag="VFD73_22180"
     CDS             1025..>1253
                     /locus_tag="VFD73_22180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76682.1"
                     /translation="MGRIQWIRVLTLVIGLSLTACADGGMPTEPSHTAGPSFSSAKSD
                     SAHARHDALNRELESREHEFQAIREASKDSLK"
BASE COUNT          257 a          379 c          390 g          227 t
ORIGIN      
        1 cgccgggtgg aggcggcgga ctctattatt acacccccct gatcgctggc cagcgcagag
       61 cacagctccg ccgcaaacgg aggcggatcc tgaaagccgt aggtcgagcc gggatcggca
      121 actggccggt atgagcgcta ccccgtatgg gataggacgt gctaactccg ccattcgagg
      181 gataagagca gggcaaagcc cagcatcaag ggccaacaaa ctccagcatc gggtgacacg
      241 aactcgcgta aatggctgca agttgctgga attccggtgc tacagcggcc ccctggatca
      301 ggagagtcct ggttcgagcc caggaggggc aatcaaggtc gccgagtggc gaccttgttc
      361 tttttcgagg gctcgccgtc ggccgctgcg cgtcctccgt ttgagcccag actgaaagcg
      421 ctacatggag taaaaacggt gtccagaccg agggctgcta tgaaacggcc tggacgtgtg
      481 tggtgagaca gtgtggctac agaaccctct actgcggggc acgtcacaca cgtagagtgc
      541 aatccttggc gccccccaaa ctggttatcg tcaaggttct atgcacgcaa gcagagcctg
      601 ccaaccgagt acatgtcttg agccccttgt ttaggaagct gttgccccag ctaaaatggc
      661 ggcgttcata agttcgccag gcttcccccc tccgcatcgc gcctgctgca acccatcgca
      721 gcaggcctga gtccaggatt tgcaataatg cggtttgccc gcggccacta aaggcgaggg
      781 cacacaattg acgtcacccg atagagcaca cccggagtga tccggggccg caaaaccgga
      841 ggtctcatcg gtccatcgat gagatagctc ggtgccgaag gtgtacgatc tcgcgccctg
      901 aaccgcgcgg tgctcgccct cggccctcgg agtgagcacc gcgtttcacg ttcgggattt
      961 cgggctgtcc cgttgtgcgg ccggcgcttc ccgaggtggc atttaccagt tggaggaggt
     1021 cggcatgggc cgcattcaat ggattcgcgt tctcacgctc gttattgggc tctcgttaac
     1081 ggcttgcgcc gacggtggca tgccgacaga gccatcgcat accgccgggc cgtcgttcag
     1141 cagcgcaaag agcgattcgg cgcacgcgcg gcacgacgcc ctgaaccggg agctcgaatc
     1201 gcgcgagcac gagttccaag cgatcagaga ggccagcaag gacagcctca agg
//
LOCUS       DASRPQ010001958         1157 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_852992, whole genome shotgun sequence.
ACCESSION   DASRPQ010001958 DASRPQ010000000
VERSION     DASRPQ010001958.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1157
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_852992"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1139)
                     /locus_tag="VFD73_22185"
     CDS             complement(<1..1139)
                     /locus_tag="VFD73_22185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76683.1"
                     /translation="MCDLGVWAVTHGSPQWFRYAYFEFAPSASGCAQAGRYPTSQLVP
                     LELARIVTWAVGLSGSVNLIALGLLNCVVASFGIASLATGLRLRLWAQLAVAAATWMI
                     MADAAYFDLYASPFSEPAALMGLLLVAAGVVYLGRGQSETVFGLALAGSGGFLAILAK
                     QQYLILAMPVCLTLVLASTAWNGGRGLRQLWTARTRAAIMVAVLLATMTAAYAFWDRA
                     SNYATLLHRQQVVDVVFSEIVTAHDDQARADLRALGLPPAWAKYAGTNSFSTVSVRND
                     PLYPRYEAKLSDGTIAYFLLTHPRRIVSIAQQAAIDAQKLRVTYLGDYAPSAGHPPGA
                     TESRVAVLTWLIHRLPQHLGLLWYVPLWEIMALIAIAALFVPHGGA"
BASE COUNT          225 a          374 c          377 g          181 t
ORIGIN      
        1 gctccgccat gcggcacgaa cagcgcggcg atcgcgatca acgccattat ttcccacagc
       61 ggtacgtacc acagcaggcc gaggtgttgc ggcagccggt gtatcagcca ggtgagcacg
      121 gccacccggg attccgtcgc cccaggcgga tgaccggcgc ttggcgcata gtcgcccagg
      181 taagtaaccc ggagtttctg ggcatcgatg gccgcctgct gcgcgatgct gacgattctg
      241 cgcggatggg tgagcaggaa gtacgcgatg gtgccatcgg acagttttgc ctcataccgc
      301 ggatagagcg gatcattccg gaccgagacg gtactaaagg agttggtgcc ggcgtacttg
      361 gcccaggcag gaggcagccc gagcgcgcgc aggtcagccc gtgcctggtc atcatgcgcg
      421 gttacgattt cactgaagac cacatccacg acctgctggc ggtggagcag ggtggcgtag
      481 ttgctcgccc tgtcccaaaa cgcataggct gcggtcatcg tcgccaggag cacggcgacc
      541 atgattgctg ccctcgtccg ggctgtccag agctggcgaa gcccgcgccc gccgttccag
      601 gccgtgctgg ccagcaccag ggtcaggcag accggcatgg ccaggattag gtactgctgt
      661 ttcgccaaga tcgcgaggaa accgcccgat ccggccaggg ccaagccgaa cacggtctcg
      721 ctctgccccc tgcccaggta tacgacaccg gcagcgacca gcaacaagcc catcagggcg
      781 gcaggctcgc taaatggact ggcgtacaga tcgaagtatg ccgcgtccgc catgatcatc
      841 cacgtagctg ctgctacggc cagctgcgcc caaagtctca gtcgcagacc ggtcgccagg
      901 cttgcgatcc cgaacgaggc gacgacgcag ttcagcaggc ccagcgcgat caggttcacg
      961 gagccggaca ggcctactgc ccaggtcacg atccgggcca gttccagcgg cacgagctgc
     1021 gatgtcgggt accggccggc ctgggcgcag ccgctcgccg atggagcaaa ttcgaagtaa
     1081 gcgtagcgga accactgggg ggaaccatgg gtgactgccc agacgcccag atcgcacatc
     1141 acccggggtc cgtcatg
//
LOCUS       DASRPQ010001959         1167 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3699777, whole genome shotgun sequence.
ACCESSION   DASRPQ010001959 DASRPQ010000000
VERSION     DASRPQ010001959.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3699777"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            380..1138
                     /locus_tag="VFD73_22190"
     CDS             380..1138
                     /locus_tag="VFD73_22190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HZI76684.1"
                     /translation="MLSTLGTLKGYILNGMDEELGVVDEFYFDDRYWTLRYLIVDAGT
                     WLTGRQVLISPYAVQDVIHHGKLMSVDLTRKQVRKSPALDTDQPVSGQFEEAYYGYYG
                     WPMYWDGPQRWGSYDLIEREHAKWKKADPTVKPWDRHLRSSQEVSGYAIEALDGELGH
                     VEDFVIDEETWAIRYVIVATRNWWPGKKVLVSPEWIERVGWSESKVFINLTREAIRQS
                     PEFTPESLLSRDYEEGLHRHYQRRGYWMDELAAL"
BASE COUNT          234 a          314 c          418 g          201 t
ORIGIN      
        1 caagcgtcgg atgaaatcag ctgcacggga aggcgcgggc atcaggacgg gggtcaggtt
       61 catggtgaga tttgatgcga agacgacacc agatcgcggc gggcaagtaa ataagcgatc
      121 agcgcgtccg gcgggttccc cgcccgccgc acgggccatc ggccgccgtc gttggagccg
      181 gccagcattg tctccggctc accccgttgc gcccggggac cggacactcc ggcgccggcc
      241 ctggccggcc gctatggggg ggacgccccc tttcagcggg agggcggggc cgctaacgtg
      301 atgcgatctg gcgaaacctc cggctcgcgc gaatcgcggg cgagggcgga cagagagacc
      361 cagcaaagaa agcggatcta tgttgagcac acttggaaca ttgaaagggt atatcctgaa
      421 cgggatggac gaagagctgg gagtggtgga cgagttctat tttgatgatc ggtactggac
      481 gcttcgctat ctcatcgttg acgccggcac ctggctgacc ggccggcagg tcctgatctc
      541 tccgtatgcg gtgcaggacg tgatccatca tgggaaactg atgtcggtcg atttgacccg
      601 aaaacaagtc cgcaaaagcc cggcgctgga cactgaccag ccggtgtcgg gccagttcga
      661 ggaggcctac tacggttact atgggtggcc gatgtattgg gatggaccgc agcggtgggg
      721 ttcttatgac ctaatcgagc gggagcacgc caaatggaaa aaggcggatc cgaccgtgaa
      781 gccctgggat cgacacctgc gcagcagtca ggaggtatcc ggctatgcca ttgaggcgct
      841 ggacggcgag ctcgggcatg tggaggactt tgtgatcgac gaggagacct gggcgatccg
      901 ctacgtgatc gtggcgacgc ggaactggtg gccagggaag aaggttctgg tctccccgga
      961 gtggatcgag cgagtgggtt ggagcgaatc caaagtgttc atcaacctca cccgcgaggc
     1021 tatcaggcaa tcgccggagt tcacgcccga atcattgctc agccgggact acgaagaagg
     1081 gctgcatcgc cactaccagc gcaggggcta ctggatggac gagctggccg cgctgtgacc
     1141 gggtggcggt ggtggcggtg gtggcgg
//
LOCUS       DASRPQ010001960         1168 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1501246, whole genome shotgun sequence.
ACCESSION   DASRPQ010001960 DASRPQ010000000
VERSION     DASRPQ010001960.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1501246"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            246..>1168
                     /locus_tag="VFD73_22195"
     CDS             246..>1168
                     /locus_tag="VFD73_22195"
                     /inference="COORDINATES: protein motif:HMM:NF012271.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HZI76685.1"
                     /translation="MAIYPQTPGNRAQATMMPVSRPRTATQPQPPTTLLPNTPQGLSL
                     AQGPGSDITVTWSAPAVDSTHGAATGYNLQFGPSGAGSWTTVPNVTSPYQLSGLGAGT
                     AIDVRIQGSDAAGVSAWSAASTLTTAAGQSAPNTPAISQVVAPPDGTNTNLLVTWTAP
                     TTDGTHGAAAGYNLRYRTSGAGSWTILSGVSSPYTLIGLTGATPIDVAIQATNAAGNP
                     STWSDPVTASTWGATVVPGDWSAATMQVHGANVAPNGGVNLTATPAPTAVTGASFAWS
                     SSASAVPTANLIAAAPDGKSNGWGQYFTAPAT"
BASE COUNT          224 a          396 c          346 g          202 t
ORIGIN      
        1 gacctagggg catgacggtg aatacctgta ccgccgatca cccgcgcgcg ctccccactt
       61 acctgcgggc cggtttccga tctctgcgcc aggtgcgcga ggtgtggaat gtgccactgc
      121 ggctgggaat gcggattccg caacgcttgt tgggctgatg ccaagagtta gttagtcaca
      181 cttgacaatt cagatattat aactaactaa cgcctgcctc accacggaga ccaggcaggt
      241 cgagcatggc gatttatcca cagacaccag gcaatcgggc tcaagccacc atgatgccgg
      301 tgtcgcggcc aaggactgct acccagccac aaccccccac gacactgctg ccgaacacgc
      361 cccagggcct gtctcttgcg caaggcccgg gcagcgacat aacggtcacc tggagcgccc
      421 ccgccgtcga cagcacgcat ggcgcggcta cagggtataa tctgcaattc ggcccttccg
      481 gtgccggcag ttggaccact gtcccgaacg tcaccagccc gtaccaattg tcggggctgg
      541 gagcagggac tgcgatcgac gtgcgtattc aaggctcaga cgccgccggc gtaagcgcat
      601 ggtctgcggc ttctacactg acgacggccg ccgggcagtc tgctccgaac acgccagcga
      661 tctcgcaggt cgtagcgccg ccggatggaa ccaataccaa cctgttggtc acctggacgg
      721 caccgaccac cgacggcacc catggtgccg cggctggcta taatcttcgt tatcgaacct
      781 cgggagccgg cagttggacg atactgtccg gcgtctccag cccctacacc ctcatcggcc
      841 tgacgggtgc cacgccgatc gacgttgcaa ttcaggccac caatgcggcg ggtaatccaa
      901 gcacctggtc cgatcccgtc accgccagca cctggggcgc gactgtcgtt ccgggagact
      961 ggagcgctgc gacaatgcag gtccatggtg cgaatgtggc acccaatggc ggcgtgaacc
     1021 tgacggccac tcctgcacct accgcggtca ctggggcatc cttcgcgtgg tccagcagcg
     1081 cctctgcggt gccgactgcc aacctgatcg ccgctgctcc cgacggtaag tccaacggat
     1141 gggggcagta tttcaccgcg ccggcgac
//
LOCUS       DASRPQ010001961         4160 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2135182, whole genome shotgun sequence.
ACCESSION   DASRPQ010001961 DASRPQ010000000
VERSION     DASRPQ010001961.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4160
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2135182"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..646
                     /locus_tag="VFD73_22200"
     CDS             <1..646
                     /locus_tag="VFD73_22200"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: protein motif:HMM:NF014908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0071951 - conversion of methionyl-tRNA to
                     N-formyl-methionyl-tRNA [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HZI76686.1"
                     /translation="PEILTLPPRGMINVHASLLPRYRGAAPVQHAILRGEMETGVSIM
                     QMEEGLDSGPVLHRVPTAIGQEETAGALAVRLAEVGAMALIEALSLISGGLARPQPQD
                     DSKATYAPKIDREMARVLWHWDAATLARQVRAFDPAPGAWTNLNGTGVKLFGARAVPG
                     TGEPGLVLSAGERLVVAAGQGALAVQEVQPAGKARMAVEQWVRGRGVAVGRKFE"
     gene            643..1266
                     /locus_tag="VFD73_22205"
     CDS             643..1266
                     /locus_tag="VFD73_22205"
                     /inference="COORDINATES: protein motif:HMM:NF014622.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HZI76687.1"
                     /translation="MRPLPRLHAFTDPAIVRAADFGVRAAAIAAGGPAVALHARARGE
                     SGALLTTVALRLVALARPPEAAVFVSGRSDVAAAVGAAGVQLANDDVAPRDARRVFPV
                     GWLGRSVHSVTEARTAVSEGCDFLVVGNVYETASHPGRPAAGLELIASTVELGLPVIA
                     IGGITPERISEVHRAGAYGVAAIRSLWHAADPAAAALALLAPWMNET"
     gene            1263..1472
                     /gene="thiS"
                     /locus_tag="VFD73_22210"
     CDS             1263..1472
                     /gene="thiS"
                     /locus_tag="VFD73_22210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003110013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HZI76688.1"
                     /translation="MRELRISVNGEPRTLEGPATIADLLQELKLDPRMVVVELNRQII
                     RRPVLAATALSDGDTVELVHFVGGG"
     gene            1525..2331
                     /locus_tag="VFD73_22215"
     CDS             1525..2331
                     /locus_tag="VFD73_22215"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF017501.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990107 - thiazole synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HZI76689.1"
                     /translation="MTSTIPAAEPLTDLPLTVAGRTFRSRLMVGTGKYHDNATMARAI
                     EASGAEIVTVAVRRVNLDRTQEEGILYHLHPDQYFLLANTAGCYTADEAIRYARLARE
                     AGFNEYIKLEVIGDRETLLPDTEGLLAATRQLVKEGFAVMAYTTDDLVTALKLEDAGC
                     AAVMPLASPIGSGLGLLNPYGIRTIKRRLSVPVIVDAGVGTASDACLTMEQGVDGILM
                     NTALAEARDPVVMAAAMRAAVESGRLAFLAGRMPRREVAMPSSPVSGLLE"
     gene            2362..3660
                     /gene="rsmB"
                     /locus_tag="VFD73_22220"
     CDS             2362..3660
                     /gene="rsmB"
                     /locus_tag="VFD73_22220"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: protein motif:HMM:TIGR00563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HZI76690.1"
                     /translation="MARPSGLEPRRAALKILEEVRQGKPLDAALERGLGTLADADRRL
                     AHQLAVGVLRQRTFLDQRLAALVPRGWESVSAPLQDILRLGAFQLITLERVPPHAAVD
                     TTVSLAKELGGSRAGGFVNAVLRRLTGTGPDTPSGQDAAALAQHYSHPEWLVERWLRA
                     FGREETERLLDWNNTKPKLVLQPARLNGSALIELWRGCGLQVESAPYEAGLLTDRSRP
                     TELAGYSDGSFVVQDPAQALLSRFAGFSPGATIYDACAAPGGKSIALGRSAEMIIAGD
                     ISRVRAQRLRENLLRAGSGREHIVVADGREPPLRSVDAVLLDAPCLATGTFARHPDAR
                     WRVTPEALDGLQRLQSALLESLSQLVAPGGLLVYSTCSLEQEENQSQVDRFLRSHPDF
                     RRAPGRTVPDSLVSEQGDLVILPQRHGMDGAYAARLRRVQ"
     gene            3675..>4160
                     /locus_tag="VFD73_22225"
     CDS             3675..>4160
                     /locus_tag="VFD73_22225"
                     /inference="COORDINATES: protein motif:HMM:NF015734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HZI76691.1"
                     /translation="MSSGVSLFQSAPWRAFLRDMGLIVLTFVLGYGISALWLSPGSVF
                     HKEHALPRVLELPESRAREKLTELGFRPRLDGERPNDSFPAGTVVWQDPPPGTVLQPN
                     SVVQLVLSAGPVLVPVPDVIGLNVAQAAKILAAAGVRVGSVDSTSGGGEDAGVVVATR
                     PA"
BASE COUNT          694 a         1311 c         1415 g          740 t
ORIGIN      
        1 gcccgagatc ctcaccctgc cacccagagg catgatcaac gttcacgcgt cgctgctgcc
       61 ccgctatcgt ggcgccgccc cggtgcagca cgccatcctg cgaggcgaga tggagacggg
      121 agtgagtatc atgcagatgg aagaggggct cgatagcgga cccgtcctcc atcgggttcc
      181 caccgcgatt gggcaggagg agaccgccgg cgccctggca gtgcgcctag ccgaggtcgg
      241 cgccatggcg ctgatcgagg cgctctcgtt gatctccggc ggtctcgcgc gtccccaacc
      301 gcaggatgac agtaaggcga cgtacgcccc caagatcgac cgggagatgg ctcgcgtcct
      361 ctggcactgg gatgccgcca cgctggcccg gcaggttcgc gcctttgatc cagcaccggg
      421 cgcgtggacg aatctgaacg gcaccggcgt caagcttttc ggggcgaggg cagtgcccgg
      481 aaccggcgag cccggcctcg tgctctccgc tggtgagcgg ctggttgtcg cggcgggaca
      541 gggcgcactg gcggtgcagg aggtgcaacc ggccggaaag gcgcgcatgg cagttgaaca
      601 gtgggtgcgg ggacgagggg tggcggtcgg caggaagttc gagtgagacc gctgcctcgg
      661 ctgcacgcgt tcaccgatcc agccatcgtg cgggccgccg attttggagt tcgggccgct
      721 gccattgctg ccggtgggcc ggcggtggcg ctgcacgctc gcgcgcgagg cgaaagcggt
      781 gcgctcctca ctacggtggc actgcgactc gttgccctgg cgcgtccgcc ggaagcggcg
      841 gttttcgtaa gcggcagaag tgatgtcgca gcggccgtcg gcgcagcggg cgtacagctt
      901 gcaaatgacg atgttgcgcc cagggacgcc cgcagagtct tccccgtcgg atggctcggc
      961 cgctcggtcc atagtgtcac ggaggcgcgc accgctgtga gcgaagggtg cgattttctg
     1021 gtggtgggga atgtgtacga gaccgcgtcc catcccggac gcccagctgc cggtctcgag
     1081 ctcatcgcgt ccacggtcga actggggctg ccggtgattg ccatcggcgg cattacgccg
     1141 gaaaggatct ccgaagtgca ccgcgccgga gcctacggcg tggcggcgat ccggtcgctg
     1201 tggcatgctg ccgatccggc cgccgcggca cttgctctac tggcaccctg gatgaatgag
     1261 acatgagaga gctgcgcatt tcagtcaacg gagagcccag aacgctcgag ggccccgcga
     1321 cgatcgccga tttgctgcag gaactgaaac tggacccccg gatggtcgtg gtggagctca
     1381 accggcaaat cattcgacgt ccagtcttgg cagccaccgc attgtccgac ggggacaccg
     1441 tggaattggt gcacttcgtt gggggaggct gagggcacgc ggttatcttt cgtcagaatg
     1501 ctgacgaacc aacgagagca caccatgacc agcacgatac ccgcagctga accactgacc
     1561 gaccttcctc ttaccgtcgc gggccgcacc ttccgctcga gactcatggt cggaaccggc
     1621 aagtaccatg acaacgctac gatggcgcgt gcaatcgagg cctcgggagc cgagatcgtc
     1681 acggtggcgg tccggagggt caacctggat cgcacccagg aagagggaat cctctaccac
     1741 ctgcaccccg accagtattt cctgctcgcc aacacggcgg gctgttacac cgccgacgag
     1801 gcaatccggt acgctcgcct tgcccgcgag gcggggttca acgaatacat caagctcgag
     1861 gtcatcggcg atcgcgagac cttgctgccg gataccgagg ggctgctcgc cgcgacccgg
     1921 cagctggtca aggaaggctt cgcagtgatg gcgtatacca ccgatgacct ggtcactgcg
     1981 ctcaagttgg aggacgcggg gtgcgcggcg gtcatgccgc tggcatctcc catcggcagc
     2041 gggctggggc tgctgaatcc ctatggcata cggacgatca agcggcggct ctcggttccg
     2101 gtgattgtgg acgccggagt cggcactgcc tccgatgcct gtctaaccat ggagcagggt
     2161 gtagatggca tcctgatgaa taccgctctg gcggaggcgc gcgatcccgt ggtcatggcc
     2221 gccgccatgc gggctgccgt cgagtcgggt cgactggcgt tcctcgccgg caggatgccc
     2281 cggcgcgagg tggctatgcc gtcgagtcca gtctccggat tgctggagta gcagccacat
     2341 gcctcggtgc tgagctccgc gatggcccgg ccaagcgggc tggaaccgcg ccgagcggcg
     2401 ttgaagattc tggaggaggt gcggcagggg aaaccgttgg atgcggcgct ggaacgaggc
     2461 ctgggcacct tggccgatgc tgatcgccgg ctggcccatc aactcgctgt tggagttctc
     2521 cgccagcgaa cgttcctcga tcagcggctt gccgcgttgg taccccgcgg ctgggagagt
     2581 gtgagcgccc cactgcagga catcctaaga ctaggagcgt tccaactcat aacgctcgag
     2641 cgggtgccgc cacatgcggc ggtggatacg actgtctcat tggccaagga actggggggc
     2701 agtcgtgccg gcgggtttgt caacgcggtg ctgcgccgcc tcactggaac cggccccgat
     2761 actccgtctg gtcaggacgc tgccgccctt gcccagcact actcccatcc cgagtggctg
     2821 gtcgaacgct ggcttcgcgc tttcggcaga gaggagaccg aacgtctcct cgactggaac
     2881 aacaccaaac cgaaattggt cctgcaaccg gcccgcctga acggctcggc actcatcgag
     2941 ctgtggcgcg ggtgcggcct tcaagtagag tcggctccct atgaggccgg cctgctgact
     3001 gatcgaagcc gtccaacgga gctcgcgggc tatagtgatg gcagcttcgt ggtccaggat
     3061 cccgcgcaag cgctgctgag tcggttcgct ggcttttctc ctggagcaac gatctacgac
     3121 gcgtgcgccg cacccggagg aaaatcaatt gctttgggac gttcggccga gatgatcatc
     3181 gcaggtgaca tcagccgagt cagggcgcaa cggttgagag agaacctgct tcgagcaggt
     3241 agcggacgtg agcatatcgt cgttgccgat ggccgggagc cgccgctacg ctcggtcgac
     3301 gccgttctgc tggacgctcc ctgcctggcg acgggaacgt tcgcgcgtca ccctgatgct
     3361 cgatggcggg tcactccgga ggcgttggac ggactgcagc ggctccagag cgcgttgctc
     3421 gagtccctca gccagttggt cgcgcccgga ggactgctgg tgtactcgac ctgctcgctg
     3481 gagcaggagg agaaccagtc gcaggtagat cgcttcctcc ggagccaccc cgactttcgg
     3541 cgagcccccg gcagaacggt tcctgactcg ctcgtctcgg agcaggggga tctcgtcatc
     3601 ctgccgcagc ggcatggcat ggatggagcg tatgcagcac gcctacggcg ggtccaatga
     3661 gagcgcgtcg acacatgagc tccggcgtct ctctctttca gtcggcgccg tggcgtgcct
     3721 tcctccgaga catgggattg atcgtcctca ccttcgtgct gggctacggc atctcggcgc
     3781 tctggctctc acccggctcg gtgtttcaca aagagcacgc acttccgcgg gttctggagc
     3841 tgccggagtc cagggcgaga gaaaaactga ccgagctcgg tttccgcccc cgtctcgacg
     3901 gagaacggcc caacgattcc tttccagcag gcaccgtggt ctggcaggat ccaccgccgg
     3961 ggacggtgct gcagcccaac agcgtggttc agttggtcct cagtgctggc ccggtgctgg
     4021 ttcctgttcc cgacgtcatc ggcctcaacg tagctcaggc cgccaagatt ctggccgcag
     4081 ccggtgttcg ggtcggatct gtcgattcca cctcgggcgg aggtgaagac gctggagttg
     4141 tcgttgcaac gcgaccggcc
//
LOCUS       DASRPQ010001962         2039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_853182, whole genome shotgun sequence.
ACCESSION   DASRPQ010001962 DASRPQ010000000
VERSION     DASRPQ010001962.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_853182"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(221..1384)
                     /locus_tag="VFD73_22230"
     CDS             complement(221..1384)
                     /locus_tag="VFD73_22230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HZI76692.1"
                     /translation="MATLSASASALTVLSEEEVMFRDAVREFAETEIRPHVQSMDEAA
                     QFRADLIPKFFELGLMGIEVPETFGGSSGTIFMAVLAIEELARVDASAAIYVDVHNTL
                     VNNALLRWGSPEQQSRYFPQLTSGLLGAFALSEPGSGSDAFALATRAERQGDRWSLTG
                     TKFWITNGAEAGLFIIFANADPAKGYKGITGFLVERAFPGFAVGKKENKLGIRASSTT
                     ELILEDCAVPQENVLGPVGQGYKISIETLNEGRIGIGAQMLGVATGALEAATAYVKER
                     RQFGKTIAEFQAVQFQLAQMATDLEAARLMVYNAARLKDARLPFAQQAAMAKLFSSQV
                     ADRITSSCLELFGGYGYSKEYPAEKYYRDAKIGTIYEGTSNMQLQTIAKALLK"
     gene            1465..>2039
                     /locus_tag="VFD73_22235"
     CDS             1465..>2039
                     /locus_tag="VFD73_22235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76693.1"
                     /translation="MSSISRHPGGSVLRRLQEDRPLAAVELRPPRTGLSSKESMELWI
                     DMYHSIRRLARRDTVVFLTDNAVGLSEEENLAHLTANLAGDVDPRRIVPFLTSKHSIE
                     YCLMHASRAASHGFEALTVLGGDHTAGPPRCVPHARELRALIRRRVPQLDLGGWASPH
                     RSAEEQVSFLLDERFEAEFYLTQIVSHHSVRA"
BASE COUNT          368 a          640 c          598 g          433 t
ORIGIN      
        1 agagcactgg cggccaggat acaacctccg gcagcacggt gaacccgagc tccaccagca
       61 ccactggact cgattcaacc gggcagtcca agaccggcga taccactggc tacggacaat
      121 cacagcagca gcgggactcg acctctcgct agtagcggcg cctaaaagtg gcgggtccgt
      181 tcgggggtgc caatggcacc cccgaatttt ttgtcatttc ttacttcagc aatgccttcg
      241 cgatcgtttg cagctgcatg ttgctggtgc cttcgtagat ggtcccgatc ttggcatccc
      301 ggtagtactt ctccgcggga tactccttgg agtatccata ccccccaaag agctccaggc
      361 aggaggacgt gattctgtcc gccacctgag agctgaacag ctttgccatg gcggcctgtt
      421 gcgcaaacgg gaggcgtgcg tccttgagcc gagccgcgtt gtacaccatc agccgcgctg
      481 cctcgaggtc ggttgccatc tgagccaact ggaactgcac tgcctggaac tctgcgatgg
      541 tcttcccgaa ttgccgccgt tccttgacgt aggccgtggc ggcctcgagc gcgccggttg
      601 ccacccccag catctgggcg ccgatgccga ttctcccctc attcagcgtc tcgatcgaga
      661 tcttgtatcc ctgccccacg ggtcccagga cgttctcttg cgggactgcg cagtcttcca
      721 gaatcagttc ggtagtactc gatgcccgaa tgccgagctt gttctccttt ttgcccactg
      781 caaacccggg gaacgctcgc tctaccagga agccggtgat tcccttgtac cccttggccg
      841 gatcggcgtt ggcaaagatg atgaacagcc cggcttcagc gccgttggtg atccagaact
      901 tcgtgccggt cagggaccag cggtcacctt gtcgttcagc tcgcgttgcc aacgcaaacg
      961 cgtcactgcc gcttcctggt tcggagaggg cgaaggctcc gagcaatcca gaagtgagct
     1021 gaggaaagta ccgcgattgc tgttccggac tcccccagcg caggagtgca ttgttcacca
     1081 gggtattgtg gacgtcgaca tagatggcgg ccgaggcatc cactcgggcc agctcctcga
     1141 tcgccagcac cgccatgaat atggtccccg agcttccccc aaacgtctcg gggacttcga
     1201 ttcccatgag ccccagctcg aaaaacttgg gaatgagatc ggcgcgaaac tgcgcggcct
     1261 cgtccatgct ttggacgtga ggtctgatct cagtctccgc aaattctcgg accgcatcgc
     1321 gaaacattac ttcttcttcg gacaggaccg tcagggccga ggcggaagca gagagggtag
     1381 ccatatgtca cggggttggg gtgggcctag gcagaagata acctgaatgg aaaccttgtc
     1441 gcccccgtta gtttcctcgc cacgatgtca tcgatctctc gtcaccccgg cggttcggtc
     1501 ttgcgccgcc tccaggagga tcgcccgctg gcagcggtcg agttgcggcc gccgcggacc
     1561 ggtctttcct ccaaggaaag tatggagctc tggatcgata tgtatcactc gatccggcgc
     1621 ctggctcggc gcgacacggt ggtctttcta acggacaacg ccgtcggtct ttcggaggag
     1681 gagaacctcg cgcatctcac agccaatctg gccggcgatg tagatccgcg tcgcatcgtt
     1741 ccattcctca cctccaagca ttcgatcgag tattgcctga tgcatgcatc gcgtgcggcg
     1801 tcccatggct tcgaggcgct cactgtgctg ggtggcgatc acacggctgg gccccctcgg
     1861 tgcgtgccgc atgcccgtga gctcagagcg ctgatccgcc ggcgggtccc ccagttggat
     1921 cttgggggat gggccagccc ccaccgctca gcggaggagc aggtcagctt tcttttggat
     1981 gagcgattcg aggcggagtt ttatctgacg caaatcgtct cgcatcacag tgttcgtgc
//
LOCUS       DASRPQ010001963         1081 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4622000, whole genome shotgun sequence.
ACCESSION   DASRPQ010001963 DASRPQ010000000
VERSION     DASRPQ010001963.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4622000"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(225..416)
                     /locus_tag="VFD73_22240"
     CDS             complement(225..416)
                     /locus_tag="VFD73_22240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76694.1"
                     /translation="MALVVLVVGGYVGWHVRHAWGANADIKVYKARMPIFRKSRNRSA
                     LRALALVVITLFLLRMLSK"
     gene            complement(659..>1081)
                     /locus_tag="VFD73_22245"
     CDS             complement(659..>1081)
                     /locus_tag="VFD73_22245"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HZI76695.1"
                     /translation="IEGGLLDVLEREGAGCIAFSPLAQGLLTSRYLDGIPAGSRAARS
                     DSSLSGDQLSEQNLARVRALNEIARARGQSLAQMALAWALRDPRVTSVLVGASSVAQL
                     EENLAAAGQAAFSAEELAEIDRQSTESGINIWAASSTE"
BASE COUNT          186 a          385 c          340 g          170 t
ORIGIN      
        1 tgccgaagct cttggcaagt gcctcaccct cggcgacgag ccgcccgaac agcccggcca
       61 ccgagtcaag gatctcgagg tcaaggagat cctcatccga tcgcgtatgc accctgattc
      121 ctccgcctga gcatctcaac agttgagtag ctcaaacata taggtggaaa gttgagtagg
      181 tcaaactttt atttacccaa catctgggca gcctgcggga cgggctactt cgacagcata
      241 cgcagcagga acagggtgat caccaccagg gccagtgccc tcagcgcgct gcggttgcgg
      301 gacttgcgga agatgggcat ccgggccttg tacaccttga tatcggcgtt ggccccccag
      361 gcatggcgga catgccagcc cacgtacccg ccgaccacca agacgacaag cgccaccaag
      421 actgcggctg accccacggc gcccgaccct ccctgcgctg tgatcctgcc tcaagagcat
      481 cgcgcatgat cggtgcgcgt tccactgctt tccgctgaat caccgtcgtg tcgtagccca
      541 accagcgccc aggccagccg ggtaccccag ccagcagggc cacggaccgg tgccgaagga
      601 accggtccgt aggccaccgg ggggttccag ggggttcgcc cccccagacc aacactgcct
      661 attcggtgct ggaggctgcc cagatgttga tgcccgactc ggtcgactgc cggtcgatct
      721 cggccagttc ctccgcgctg aaggcggcct ggcccgccgc ggccaggttc tcctccagtt
      781 gcgccacgct gctcgcgccg accagcaccg aggtgacccg cggatcgcgc agcgcccagg
      841 cgagcgccat ctgggccagc gactggccgc gggcgcgggc gatctcgttg agcgcgcgca
      901 cccgggccag gttctgctcg ctgagctggt cgccggacag gctgctgtcg ctgcgcgcgg
      961 cgcgcgagcc tgccgggata ccgtccaggt acctgctggt gagcaggccc tgcgccagcg
     1021 gggagaacgc gatgcagccg gcgccttcgc gctccagcac gtcgagcagg ccgccctcga
     1081 t
//
LOCUS       DASRPQ010001964         4142 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4295219, whole genome shotgun sequence.
ACCESSION   DASRPQ010001964 DASRPQ010000000
VERSION     DASRPQ010001964.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4142
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4295219"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..280
                     /locus_tag="VFD73_22250"
     CDS             <1..280
                     /locus_tag="VFD73_22250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76696.1"
                     /translation="KNLSRKYATMSDDERRRFALEEDEASTELPAELSFEEPRKEENM
                     GQQFSSIREEVADPEHRDGMSALLDDAQHERAVREGSQEDSDGGEQRG"
     gene            422..1465
                     /locus_tag="VFD73_22255"
     CDS             422..1465
                     /locus_tag="VFD73_22255"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HZI76697.1"
                     /translation="MLRRKSDRRRLLLAVMLTSAWAMRRLQGLGGYDLRGKVVLVTGG
                     SRGLGLALAREMAQRGARLAICGRDEESLERARASLARFGAEVVAVPCDITDREAVQR
                     LVERVASEMGNVDVLINNAGVIEVGPAETMAVADYEEAMATNFWGLLYPTLAVLPEMR
                     RRKSGRIVNITSIGGKLGIPHLLPYSASKFAAVGFSQGLRTEVAADGISVVTVVPGLM
                     RTGSPRNAIFRGQHRAEYAWFSISDSLPGLSISAERAAQKIVDACVRGDAEVLFPVTT
                     RLATMANAVAPGITMSLLGAVSRLLPSPRWGTGRRRGADSQSSLSPSLLTSLGDRAAR
                     RYNQIAPAEGEMA"
     gene            1495..2265
                     /locus_tag="VFD73_22260"
     CDS             1495..2265
                     /locus_tag="VFD73_22260"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HZI76698.1"
                     /translation="MASIYNGTVPHESWENLKRPQREEDGINVGATERIVSGVAAAVV
                     AAVGLRRKRLRPILFPVAGSLITRAFTGRCAINRALGRNSARGHRVSKVASVPRGEGI
                     KVEKSVVVSRPPEDLYRFWRNFENLPRFMDHLESVTVLDENRSHWVAKAPAGTKVEWD
                     ATIHNEIENALIAWRSLPGADVNNAGSVHFTPLQNGEWTEVRVVLSYDPPAGKLGAAV
                     AKLLGEEPSQQVEDDLRRFKQVMEAAEVPGNSRHPVRI"
     gene            2272..3252
                     /locus_tag="VFD73_22265"
     CDS             2272..3252
                     /locus_tag="VFD73_22265"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HZI76699.1"
                     /translation="MNEETPRITYDCIIVGAGPAGLSAALMLGRCRRNVLVCDVGNQR
                     NARSAAIHNYLTRDGTRPAEFLELGRAEAARYPTVEFRNVEVLDATRSPDGFRLVCAD
                     GRQLGARKLLLATGVVDELPPIDGLEPLYGTSVHHCPYCDGWEWRDRPLAIYGTGEEG
                     VALTLGLTAWSRDLVLCTDGPSRLPAEELEHLQQLDIQVREDRIARLEGRDGRLQRIV
                     FQEGEPLEREALFVCASQHQRSGLARKLGCRFTQKGAVDTGTCEATDVPGLYVAGDSS
                     KEAQFVIVAAAEGTEAGMAINKALLKDELSQKRNSTPRRSRRGGPYAKSG"
     gene            complement(3189..>4142)
                     /locus_tag="VFD73_22270"
     CDS             complement(3189..>4142)
                     /locus_tag="VFD73_22270"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HZI76700.1"
                     /translation="GRFRQGNPNIGFEDATQYEFSLRVRPTPETSLRIGTYIKRLDGL
                     VASVPLGLDPDSTIFGNADAGSVKGLELIAERELHGGFGARLIYTLQSATATASDAFL
                     LNRLISVDPVTGDTIRPARAEFPLDFDRRHSFTLILRSKVASSAGPRVFGVRALSGLE
                     AAAILRYSTGLPYSRTDAAGDSLIGLPNESRLPSTSTVDLLVRKPLKLGGARGGIYLD
                     ARNLLNRRNVIAVRRDTGLPGADEAAIQNIAENAYQAHPEAIPYESPYYRAFADVDGN
                     GYIEGRNELFPLFLSAARDYTQPLFAYGPPRLLRLGVEFLF"
BASE COUNT          782 a         1265 c         1378 g          717 t
ORIGIN      
        1 aaagaatctc agccgtaagt atgccactat gagcgacgac gaacgtcgtc gttttgcctt
       61 ggaggaggac gaagcctcca ccgagctgcc ggcggagctc tccttcgagg agccccggaa
      121 ggaggagaac atgggccagc agttctccag cattcgggaa gaagtcgccg acccggagca
      181 ccgcgacggc atgagcgcgt tgttggatga cgcacagcac gagcgcgccg tgcgggaagg
      241 ctcccaggag gactccgacg gtggggagca gcgcggctga tcgcagccga cagctcgcgt
      301 tcgggcaggc cgtggttggc ctgcccgttg tgtttcctcc ggtgatcacg gtcaccgcag
      361 tcgaaggttg aaagatccaa gctacctcct cgcgtactca cgtcgtcatc ggaccggtcg
      421 catgctgaga agaaaatcgg atcggagacg attgctgctg gccgtgatgc tgacctccgc
      481 ctgggccatg cgcagattgc aagggctcgg cggatacgac ctccggggga aagtcgtcct
      541 cgtgacgggg ggttctcgag gattggggtt ggctctggcc cgggagatgg cgcagcgagg
      601 ggcacgcctc gcgatctgcg gccgggatga agagtcgctg gagcgggccc gtgcgtcact
      661 ggcgcggttc ggagcggagg ttgtcgccgt cccttgtgac atcaccgacc gggaagcagt
      721 tcagcggctg gtcgagcggg tggcgagcga gatgggaaac gtcgacgtgc tgatcaacaa
      781 cgctggagtt atcgaggttg gcccggcgga gacgatggcg gtggccgact acgaagaagc
      841 gatggccaca aatttctggg gcctgcttta cccgacgctg gcggtgctgc ctgagatgcg
      901 ccggcgcaag agcgggcgca tcgtgaacat cacgtccatc ggtggcaagc tgggcatccc
      961 gcacctgttg ccctacagcg ccagcaagtt cgcggcggtg ggcttctcgc aggggctgcg
     1021 caccgaggtg gcagccgatg gcatcagcgt ggtgaccgtc gtgccaggac tgatgcgcac
     1081 gggcagcccc agaaacgcaa tcttccgcgg ccagcatcgg gccgagtacg cctggttcag
     1141 catcagcgac tcgctccccg gtctgtccat cagcgccgag cgggcggccc agaaaattgt
     1201 cgacgcctgc gtccggggtg acgccgaggt gctgttcccg gtcacgacac ggttggccac
     1261 gatggccaac gccgtcgccc ccgggatcac catgtcgcta ctgggtgcag tgagccgact
     1321 gctgccttcc ccacgctggg ggacgggcag gcgaagaggg gcagacagcc aatcctccct
     1381 ctctccgtcg ttgctcacga gcctgggaga ccgcgctgcc cgcagatata accagattgc
     1441 cccagccgag ggcgagatgg cctgaccaac tcctgtgact caagaggcca cggtatggca
     1501 tcgatctaca acggaaccgt cccccacgaa agttgggaga atctgaaacg ccctcagagg
     1561 gaagaggacg gcatcaatgt cggagccacc gagcgaatcg tgtccggtgt cgccgcggcc
     1621 gtcgttgccg ccgtgggact tcgacgcaag cgcctccgcc ccatcctgtt cccggtggct
     1681 ggaagtctca tcacgcgcgc cttcaccggg cggtgcgcca tcaatcgcgc gttgggccgg
     1741 aactcggccc ggggccacag ggtgagcaag gttgccagtg tcccccgagg tgaaggcatc
     1801 aaggtggaga agagcgtcgt ggtaagtcgg ccgcctgagg acctctaccg attctggcgc
     1861 aacttcgaga atctgccccg attcatggac catctggaat cggtgacggt actggacgag
     1921 aaccggtccc actgggtggc caaggcgccc gccggcacca aagtcgaatg ggatgccacc
     1981 attcacaatg aaatcgagaa cgcgttgatt gcctggcgct cgctcccggg cgctgacgtc
     2041 aacaatgccg gttcagtcca ctttacgccg ctgcagaatg gcgagtggac cgaagtccgg
     2101 gtggtcttga gctacgatcc acccgccgga aagctcggag ctgccgtagc caagctcctt
     2161 ggggaagaac cctctcagca ggtggaggac gatctccgcc gcttcaagca ggtcatggag
     2221 gctgccgaag tgcctggaaa ttcgaggcac cctgtcagga tctgacacca tatgaacgaa
     2281 gagacgcccc gcattaccta cgactgtatc atcgtaggcg cggggcccgc cggcctcagc
     2341 gcagcgctga tgctgggacg ctgccgccgg aacgtcctgg tgtgcgatgt gggcaatcag
     2401 cggaatgccc gctcggctgc catccacaac tacctcaccc gcgatggcac ccggccggct
     2461 gagtttctgg agctggggcg tgcggaagcg gcccgctacc ccaccgtcga gttccggaac
     2521 gtggaggtgc tcgacgctac ccgctcccct gacggcttcc ggttggtgtg cgccgatggc
     2581 cgccagctcg gagcccggaa gctgctgctt gccaccggcg tagtggatga gcttccgccg
     2641 atcgacggac tggagccgct ctatggcacc agcgtgcacc actgtcccta ctgcgatggc
     2701 tgggaatggc gcgatcgtcc gctggccatc tacggaacgg gcgaagaagg cgtggcgctg
     2761 acactcgggc tcacggcatg gagcagggac ctggtgttat gcaccgatgg cccgagccgg
     2821 cttcccgccg aagagctcga gcatctgcag caattggaca tccaggtgcg agaagatcgg
     2881 attgcgcgtc tggaaggcag agatgggcgg ctgcagagaa tcgttttcca ggaaggcgag
     2941 ccgctggagc gcgaggcgct tttcgtctgt gcctctcagc accagcgcag tgggctggcg
     3001 cgcaagctgg ggtgtcggtt cacccagaaa ggtgcggtcg atacggggac gtgcgaagcc
     3061 accgacgtcc ctggattata tgtcgcgggc gactcgtcca aggaggctca attcgtgatt
     3121 gtcgccgcgg ctgagggcac agaagcgggt atggcaatca acaaggcact gctcaaagac
     3181 gagctctctc agaagaggaa ctcgaccccg aggcgcagca ggcgcggcgg cccatacgcg
     3241 aaaagcggct gagtgtagtc gcgcgcggca gagagaaaca gcggaaacag ctcgtttcga
     3301 ccttcgatat acccgttccc atccacatca gcgaacgccc ggtagtacgg tgactcgtac
     3361 ggaatcgcct ccgggtgggc ctggtatgcg ttctcggcaa tgttctggat cgccgcctcg
     3421 tccgctcctg gcaatcctgt atcccgccgc accgcaatga cgtttcgccg gttgagcagg
     3481 ttgcgcgcat ccagatagat cccccctcga gcgccaccca gcttcaaagg ttttcgaacc
     3541 agcaagtcga cggtactggt tgacggcagt ctcgattcgt tgggaagccc gatcagcgaa
     3601 tctcctgctg cgtcggtccg agaatacgga agcccagtgc tatagcgcag gattgccgct
     3661 gcctccagtc cgctcagggc ccgaactccg aagacccgag gtccggcgga gcttgccact
     3721 ttgcttcgca gtatcagggt gaagctgtga cgccggtcga agtcgagtgg gaattcggcc
     3781 cgggccgggc gaatggtgtc tccggtgacc ggatccacgg agatgaggcg attcagaagg
     3841 aaggcatcgc tggccgttgc cgttgcgctc tgcagcgtat agatcagccg ggcaccgaag
     3901 ccgccgtgca gttcccgctc ggcaatgagc tcaagcccct ttacgctgcc cgcgtcagcg
     3961 ttgccgaaaa tggtcgaatc cggatccaga ccgagcggta ccgaggccac cagcccatcc
     4021 aagcgtttga tataggtccc tatgcggagg gacgtctctg gcgtcggtcg caccctgagg
     4081 ctgaactcat actgagtggc gtcctcgaat ccgatattgg gatttccctg gcggaagcgg
     4141 cc
//
LOCUS       DASRPQ010001965         1961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3992137, whole genome shotgun sequence.
ACCESSION   DASRPQ010001965 DASRPQ010000000
VERSION     DASRPQ010001965.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3992137"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="VFD73_22275"
     CDS             <1..207
                     /locus_tag="VFD73_22275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010875348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
                     /protein_id="HZI76701.1"
                     /translation="NWTFAGSDAGGRRAAALYTLIETAKLNDVDPHAWLADVLTRLPD
                     HPALRLHELLPWAWKTGQMRPAAA"
     gene            222..392
                     /locus_tag="VFD73_22280"
     CDS             222..392
                     /locus_tag="VFD73_22280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76702.1"
                     /translation="MFVIDNPLQAHLLMAKLKAALPLPALATPPMLAQLREQAPGLDL
                     SCVKNSQGFDLP"
     gene            519..1874
                     /locus_tag="VFD73_22285"
     CDS             519..1874
                     /locus_tag="VFD73_22285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZI76703.1"
                     /translation="MRPKERRETGQTDLFRARLDQIVDLNHPLVKLSGAIDWTFLEMH
                     FGVVYDDDPGRPPLPTRLMAGLSILKHMHDLSDEVLCERWIETPYWQLFCGEEFFQHT
                     PPFDRSSLTRWRQRMGEERLIALIQESLAVATRTGAAKPADFQQVIVDTTVQEKAITF
                     PTDAKLMHRARERLVRLAQKHGVMLRQSYVRVGKVALIQHQRYAHAKQFKRANKALRR
                     VRTLLGRTIRDIGRKIASRPELADVFARPLSLARRVKDQRQRERGRKVYSLHAPEVEC
                     IGKGKVHRPYEFGVKVSVATPLNRCKGGQFVAHVKALPGNPYDGHTLATVIPEIQARI
                     GAGLDRIVTDAGYKGHNAPQQERFKVYVAGQKRGLSPAIKRAFRRRSAVEPVIGHLKN
                     EHRMGRNYLAHSAGDAINAVLAAAGYNFRLLLRWLALLWAWITALLTLGHNHSSQPQP
                     A"
BASE COUNT          340 a          666 c          601 g          354 t
ORIGIN      
        1 aactggacct tcgccggctc ggacgcgggt gggcggcgcg cagcggcgct ctacaccctg
       61 atcgagacgg ctaaactcaa tgacgttgac ccacacgcct ggctggccga cgttctgacg
      121 cggctgcctg accacccggc cttgcgcctg cacgaactcc tgccttgggc ctggaagacc
      181 gggcagatgc ggcctgccgc ggcgtgatcc gggagagaga gttgttcgtg atcgacaacc
      241 ctcttcaagc tcacctgctc atggccaagc tcaaagcagc cttgccgttg cccgcgcttg
      301 cgacaccccc catgctggcc cagttgcgcg agcaggcacc cggtcttgac ctgtcgtgcg
      361 tgaagaactc ccaaggcttt gatctgccgt gactttcggc tttcaggaag tattcgtgtt
      421 tgccggtttg cgcgtgttgt ggactgattt tcttgcaatt tgatctggct tgcggaccgt
      481 gatccccttg tctcatcgag gtggcgacgg gggctttcat gcggccgaag gagcgtcggg
      541 agaccgggca gacggatctc ttccgggcca ggctcgacca gatcgtcgat ctcaatcacc
      601 cgctggtgaa gctttcaggc gcgatcgact ggaccttcct ggagatgcac ttcggggtcg
      661 tctatgacga cgatcctggc cgtccgcccc tgcccacgcg cctcatggcc gggctgtcca
      721 tcctcaagca catgcacgac ctctcagatg aggtgctctg cgagcgttgg attgagaccc
      781 catactggca gctgttctgt ggcgaagagt tcttccagca cacgcccccg tttgaccgtt
      841 cctcgctgac gcgctggcgc cagaggatgg gcgaggagcg gctgatcgcc ctcatccagg
      901 agagccttgc cgtcgcaacc cgcacgggag ccgccaagcc cgccgacttc cagcaggtga
      961 tcgtggacac cacggtccag gagaaagcga tcaccttccc gaccgacgcc aagctgatgc
     1021 accgcgcccg cgagcgcctg gtgcgcttgg cccagaagca cggcgtcatg ctgcgccagt
     1081 cctacgtgcg ggtgggcaag gtggccctga tccagcacca gcgctacgcc cacgccaagc
     1141 agttcaagcg cgccaacaaa gcgctccggc gtgtgcgcac cctgctaggc cggaccatcc
     1201 gggacatcgg tcgcaagatc gcatcccggc ccgaactcgc cgacgtgttc gctcgtcccc
     1261 tgtcgctggc tcggcgcgtc aaggatcagc gccagcgcga gcggggccgg aaggtctatt
     1321 cgctgcatgc ccctgaggtg gagtgcatcg gcaagggtaa ggtgcaccga ccgtatgagt
     1381 tcggggtcaa ggtctcggtc gcgacaccgc tcaaccgctg caagggcggc cagttcgtgg
     1441 ctcacgtgaa ggcgctgccc ggcaacccgt atgacgggca cacgctcgca accgtcatcc
     1501 ccgagatcca ggcgcgcatc ggcgccggcc tcgacaggat cgtcacggat gccggctaca
     1561 agggccacaa cgcaccacaa caggagcgct tcaaggtcta tgtcgccggt cagaagcggg
     1621 ggctctctcc cgcgatcaag cgcgccttcc ggcgccgctc ggccgtggag cctgtgatcg
     1681 ggcacctgaa gaacgagcac cggatgggcc gcaactacct cgcccacagc gccggtgatg
     1741 cgatcaacgc cgtcctagcc gccgccggct acaacttccg cctcttgctg aggtggctgg
     1801 cgctcttgtg ggcttggatc acagccctcc tcacactcgg ccataatcac tcgtcacagc
     1861 ctcagcccgc ctgaccggcg ttcttcacgg acgactcaat acgcaggtgc gatgttgtca
     1921 gtcccctaag ggcacgaatg gctcaatgcg caatctcatc g
//
LOCUS       DASRPQ010001966         1195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1162886, whole genome shotgun sequence.
ACCESSION   DASRPQ010001966 DASRPQ010000000
VERSION     DASRPQ010001966.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1195
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1162886"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..196
                     /locus_tag="VFD73_22290"
     CDS             <1..196
                     /locus_tag="VFD73_22290"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HZI76704.1"
                     /translation="VDAAANVCYVLATRAGLFGLALVITSLYPGMTVLLARWVLGERM
                     RWLQRAGLLLAAAGVVLLTA"
     gene            complement(208..735)
                     /locus_tag="VFD73_22295"
     CDS             complement(208..735)
                     /locus_tag="VFD73_22295"
                     /inference="COORDINATES: protein motif:HMM:NF015648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HZI76705.1"
                     /translation="MRLVPNTDTVPASVNRYLLPHERQVITVHQHPAILIKPIFWVLI
                     GLAIAGWLSSSIAQGSGIVLLVVWILWGVLFLNLAVKVWEWAVTYFVVTSQRFVLATG
                     VITRKVNMMPLPKVTDMTFQRSPMGRLLGYGEFILESAGQDQALTNVDYLPYPEQLYL
                     EVCGLIFKDKEESPD"
     gene            complement(750..905)
                     /locus_tag="VFD73_22300"
     CDS             complement(750..905)
                     /locus_tag="VFD73_22300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76706.1"
                     /translation="MNAKSIAGWLALALVIWWVIEAPTSAAHVVHNIGTFLSSAASGI
                     TQFFASI"
BASE COUNT          214 a          374 c          397 g          210 t
ORIGIN      
        1 cgtcgacgcg gccgccaacg tctgctacgt gctcgccacc cgggccggcc tgttcgggct
       61 cgcgctcgtg atcacatcgc tatacccggg catgacggtg ctactggcgc ggtgggtact
      121 cggcgagcgg atgcgctggc tgcagcgggc aggcttgctg ctggccgcgg ccggggtcgt
      181 gctgctgact gcctgagcga gcacgcccta gtcggggctc tcctccttgt ccttgaagat
      241 cagcccgcac acctcgaggt agagctgctc cgggtagggc aggtagtcga cgttggtcag
      301 cgcctggtcc tgcccggcgg actccaggat gaactcgccg tagccgagga ggcggcccat
      361 gggggagcgc tggaaggtca tgtccgtcac cttggggagc ggcatcatgt tcaccttgcg
      421 ggtgatgacg cccgtcgcga gcacgaaccg ctgggaggtg acgacgaagt aggtaaccgc
      481 ccactcccag accttcaccg ccaggttaag gaagaggacc ccccacagaa tccagacaac
      541 caggaggacg atgccgctgc cctgcgcgat ggagctactc agccagccgg cgatggcgag
      601 cccgatgagg acccagaaga tgggcttgat caggatggcc gggtgctggt ggacggtgat
      661 gacctggcgc tcgtgcggaa gaagatacct gtttaccgag gcaggcaccg tgtcggtatt
      721 cggaaccagc ctcatcccag cgcccggccc taaatcgacg cgaagaactg cgttatcccg
      781 cttgccgccg aggacaggaa ggttccgatg ttatggacca catgcgcagc gctcgtgggg
      841 gcttcgatca cccaccagat gaccagggcg agcgcgagcc atccggcgat ggattttgca
      901 ttcaacgtcg cctcccaagg cgcccagact gccgtacctg ccagaggagc tatgttagct
      961 tgtaccaatt taccgctaac ggcttacgcg gtgaagccgc catgtcggca tgagtatgcc
     1021 cccgtgcccc acccagtatg cccgatcggc gaaaacagtg cgtgatcggg taggccggct
     1081 gcgccggcat cgaacccgga accggcgccc cgtggctgtg atcggcgatt ttgccttcgg
     1141 gagggtcagt catctgacag cattccctcc gtgcggagca tgctggtgag atgtc
//
LOCUS       DASRPQ010001967         2442 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_853924, whole genome shotgun sequence.
ACCESSION   DASRPQ010001967 DASRPQ010000000
VERSION     DASRPQ010001967.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2442
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_853924"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..307
                     /locus_tag="VFD73_22305"
     CDS             <1..307
                     /locus_tag="VFD73_22305"
                     /inference="COORDINATES: protein motif:HMM:NF014656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HZI76707.1"
                     /translation="LQADPTVQYAISLKRGRRKSRLFEKDYQFNSPYNTYLNPGLPPG
                     PVNSPSRRSIEASLYPADVRYLYFVAGPDGRHIFSRTYSEHLRAVHRIRRQQQGASE"
     gene            complement(323..958)
                     /locus_tag="VFD73_22310"
     CDS             complement(323..958)
                     /locus_tag="VFD73_22310"
                     /inference="COORDINATES: protein motif:HMM:NF014622.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HZI76708.1"
                     /translation="MPTNVAALVRLMLVTDDQLLRGRDLVQLALAAERGGVTSVQVRL
                     KHSTPRDLAGLVRSLVGALKVPVLVNDRPDVALAAGAAGAHLGPDDMPVRLARSIAPL
                     GFLLGASVGNEAEADSAAEADYWGVGPWRTSPTKSDAGDALGATGFGRIVRLAGLRPC
                     IAIGAVRPEDVAGIAGSGGKGIAVVSGILSADDIEAAARRYAVEVRKALPL"
     gene            957..1328
                     /gene="aroH"
                     /locus_tag="VFD73_22315"
     CDS             957..1328
                     /gene="aroH"
                     /locus_tag="VFD73_22315"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: protein motif:HMM:NF019356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004106 - chorismate mutase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HZI76709.1"
                     /translation="MTPGTRIHGIRGATTVAHNDAQEILAATDELLRTLIQANQLEPD
                     DIVSALFTVTRDLDAAFPARAAEDLGWNIVALLHATEIPVPGSLDKCIRLLVHAYTSR
                     TRAEIKHCYLRGATVLRPDRA"
     gene            1325..>2442
                     /locus_tag="VFD73_22320"
     CDS             1325..>2442
                     /locus_tag="VFD73_22320"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF022137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HZI76710.1"
                     /translation="MTRIEVTSRGAERWVRGHPWIFRSEVKGGPAEPGLVEVVDSRGR
                     FLGQALYSPRSEIRLRLLERSHQLIDLSWWREQLQAAAARRRTIDASAFRLVHGEGDA
                     LPSLVVDRYDRWLVVQLLSAGLETMKETIVAALGECFEPAGILLRNDAPVRSREGLTM
                     ESEIALGSVPEEIEIREGSIRYLAAPWKGQKTGAFLDQRPNRVLSEELMPRGGRALDC
                     FAYHGSFALHLAQKADQVVALDSSRDALDRGNMNASLNRLSNIEWREADAFETLRAME
                     RGREEFGMIVLDPPAFAKSRASVPAALRGYREINLRAMRLLTAGGFLLTASCSYHVRL
                     PQFLQMLSEAAGDSGRRIVLDRILGQGEDHPEILTVPET"
BASE COUNT          439 a          805 c          747 g          451 t
ORIGIN      
        1 actccaggcc gatccgactg tccagtacgc catcagcctg aagcgcggtc gccggaaatc
       61 tcgactgttc gagaaggact accaattcaa ctcaccctat aacacctacc tcaatcctgg
      121 cttgccgcct ggaccggtca actcgccgag ccgacggagc atcgaggcgt cgctctatcc
      181 ggccgacgtt cggtacctct atttcgtggc gggacccgac ggtcggcaca tcttctcgcg
      241 gacttacagc gaacacttgc gggcggttca ccggattcgc cgccaacagc agggggcgtc
      301 cgagtgatgc atgggtaagc catcagagcg gcagcgcctt ccttacctcg acagcatatc
      361 tgcgtgccgc tgcctcgata tcgtcggcac tcagaattcc cgatacaacc gcgatccctt
      421 tacctccgga accggcaatc ccagcgacat cctcgggacg caccgctccg atggcgatgc
      481 agggtcgtag cccagccagg cgcacgatgc gaccaaaacc ggtcgccccc agcgcatcgc
      541 cggcatcact cttggttgga ctggtccgcc agggaccgac gccccagtaa tcggcttcag
      601 ccgcactgtc cgcctccgcc tcgttgccaa ccgaggcgcc gaggaggaat ccaagtggtg
      661 caatgctgcg agccaggcgt accggcatgt cgtcgggccc gaggtgcgcg ccggctgcac
      721 ctgccgctag agccacatcc ggcctgtcgt tcaccaagac cggaaccttt agcgcgccca
      781 ccagactccg gaccaatccg gccagatcgc gtggggtcga gtgcttgagc cggacctgaa
      841 ctgaggtcac cccgcctcgc tctgcggcga gcgcgagctg gaccaggtcc cgcccgcgaa
      901 gcagctggtc gtcggtcacg agcatgagtc ggacgagtgc cgctacatta gtcggcatga
      961 cgccgggcac ccgtattcat ggaatccgcg gagccactac cgtggctcat aacgatgccc
     1021 aggagattct cgccgcaacc gacgagctgc tccgaacgtt gatccaggcc aatcaactgg
     1081 agcctgacga tatcgtgagc gctcttttta cggtgactcg cgatctggac gccgcctttc
     1141 ccgcccgcgc cgcggaggac ttgggctgga acatcgtcgc cctcctgcat gcgaccgaga
     1201 tcccggtgcc agggtcgctc gacaaatgca tacggctcct ggttcacgcc tatacctccc
     1261 gaacccgggc ggaaatcaag cattgctact tgcggggagc taccgtcctc cggcccgacc
     1321 gggcgtgacc cggatcgagg tcacatcgcg tggagccgaa cgttgggtcc ggggtcaccc
     1381 ctggatattt cgcagcgagg tgaaaggcgg gccggcagag ccggggctgg tggaagtggt
     1441 ggactcacgc ggtcggtttc tgggtcaggc actgtactcc ccgaggtccg agatccggct
     1501 ccgtctgctc gaacgcagtc accagctcat cgacctgtcg tggtggcgtg aacagctcca
     1561 ggccgccgcc gcacgacgcc gcaccatcga cgcgtccgcc ttccgcctgg tccacggaga
     1621 gggcgacgcc cttccgtcac tggtggttga tcgttacgac cgatggctgg tcgtccagct
     1681 tctctcggca ggcctggaga cgatgaagga aacgattgtc gctgcgctgg gcgaatgttt
     1741 cgagcctgcc ggtattctgc tccggaacga cgcgccggtg cggagccgtg aagggctgac
     1801 tatggaatca gagatagccc ttgggtcggt tcctgaggag atcgagattc gggaaggctc
     1861 cattcgctac ctcgcggcac cttggaaggg gcaaaagacc ggtgcctttc tggaccagcg
     1921 cccgaaccgg gtcctcagcg aagagctgat gccgagggga ggccgggctt tggactgctt
     1981 tgcctatcac ggctcgtttg ctcttcacct cgcccaaaag gctgaccagg tggtggcgct
     2041 cgattccagc cgcgacgctt tggaccgggg aaatatgaac gcctccctca atcgcctcag
     2101 caacatcgag tggcgcgaag ccgatgcatt cgaaaccctc cgtgccatgg agcggggtcg
     2161 cgaggagttt gggatgatcg ttctggatcc gccggcgttc gcgaagtccc gcgcatccgt
     2221 tcccgcggcc ttgcgtggct accgcgaaat taatcttcgg gcaatgcgac tgctcactgc
     2281 tggaggcttt ctgctcactg cttcctgttc ctatcatgtg cgcttacccc agttcctcca
     2341 gatgttgtcg gaagccgccg gcgacagtgg gcgccggatc gtgctcgacc gcattctggg
     2401 ccagggagaa gaccacccgg agatcttgac cgtgccggaa ac
//
LOCUS       DASRPQ010001968         2078 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1502230, whole genome shotgun sequence.
ACCESSION   DASRPQ010001968 DASRPQ010000000
VERSION     DASRPQ010001968.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2078
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1502230"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..211)
                     /locus_tag="VFD73_22325"
     CDS             complement(<1..211)
                     /locus_tag="VFD73_22325"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF013301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HZI76711.1"
                     /translation="MLANPPALQELNRIVHPAVHQRRRRLLQEAQRRGERLVISDIPL
                     LFESADPAEFDAVILVDAPEWTRRAR"
     gene            523..1128
                     /locus_tag="VFD73_22330"
     CDS             523..1128
                     /locus_tag="VFD73_22330"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004797 - thymidine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HZI76712.1"
                     /translation="MNYGQHPGWIEVISGVMFSGKSEELIRRVRRATIARRKVQVFKS
                     HLDSRYVGLYSVSSHDGTELEAIPVDSAAEIFRLTRPETEIVAIDEAQFLDPQIVHVA
                     TELASRGVRVILAGTDTDFRGVPFGSMGELMAVAEMVDKLQAICVVCGDPACRNQRLI
                     DGKPARYDSPTIMIGGRESYQARCRHCHEVPRRDEDQTALL"
     gene            complement(1137..>2078)
                     /locus_tag="VFD73_22335"
     CDS             complement(1137..>2078)
                     /locus_tag="VFD73_22335"
                     /inference="COORDINATES: protein motif:HMM:NF015817.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DbpA RNA binding domain-containing protein"
                     /protein_id="HZI76713.1"
                     /translation="IPLMQDLPKEAQRIIYTANRNRVNALTERYARKALTVQMASVPT
                     APSPARTVSAAWEGRLRAVTDLIELLDPVSLAIWTLDRSHHRAIVERISLREPAAQLV
                     TRGPVTAQTIIAFDLPTGERLRELAQGGEVVLLVPPGAEGYVASIADPRRPIQLPGAV
                     EAALAAEAAQRSRIGQAIAAGGLEHSVATLAPLFERHDPVSVAAALFKLWTGSPESSA
                     TPVRQESTVSRIYVGAGKKDGVTPNDLVAVLTKELKVNREKIGRIELRDSFSLIEIPT
                     AEADQVARGLNGATIRRRRVTARVDRGRTRPGRNSKV"
BASE COUNT          359 a          675 c          667 g          377 t
ORIGIN      
        1 aacgggctcg gcgggtccac tccggagcgt ccaccaggat cacggcgtcg aattcagccg
       61 ggtccgcaga ctcgaacagc agcggaatgt cactgatgac gaggcgctcg cctcggcgct
      121 gagcttcctg caacagccgc cggcgccgct ggtggaccgc cggatgaacg atccggttca
      181 gctcctggag tgccggcgga ttggcgagca ccgtttctcg cagccgttcc cggtccagac
      241 tgccgtcctc cccatcatct cgcgaccaaa ccgatccacg atggcggcga gcaccggctg
      301 tcccggggcc tggagctcgc gcaccagcgc gtcggagtcg atcactctga caccccgtga
      361 gcgaaacaac tccgcgacgg tcgacttacc cgcaccgatg tttcctgtga gagccaccga
      421 gagcatgggt ggaaggtcga ggatgtgggg tcgggagtcc agagcagcct cgccccaatc
      481 cttctacatt tgtgcctctc ccatcccgca acagagcagg caatgaacta cggccagcat
      541 cccggttgga tcgaggtgat cagcggtgtc atgttcagcg gcaaaagcga ggagctcatt
      601 cggcgggtcc gccgggccac catcgcgcgg cgaaaggtcc aggtcttcaa gtcgcacctc
      661 gacagccggt acgtagggct gtacagcgtc tccagtcatg acggaaccga gctggaggcg
      721 atccccgtcg actccgcggc ggagatcttt cgattgaccc ggcccgagac ggagatcgtc
      781 gcgattgacg aggcgcagtt cctcgatccc cagatcgtgc atgtcgccac cgagctggca
      841 tcccgtggcg tccgggtcat cctggccggg acggacaccg attttcgtgg ggtgcccttc
      901 ggctcgatgg gagagttgat ggcggtggcg gagatggtgg acaaactgca ggcgatctgc
      961 gtagtgtgcg gagatcccgc gtgccgcaac cagcgtctca tcgacggcaa gccggctcgc
     1021 tacgattcgc ccaccatcat gatcggcggc agggaaagct atcaggctcg ctgccggcac
     1081 tgtcacgagg tgccccgaag agacgaggac cagaccgccc tgctctgagg agttgcctag
     1141 actttggagt ttctcccggg tctcgtgcgg ccgcgatcta cgcgcgcggt aacccgtcgc
     1201 cgccgaatgg tcgcaccatt caaccctcgc gccacctggt cggcttcggc agtcgggatc
     1261 tcgatcagcg aaaagctgtc gcggagctcg atccttccga ttttctcccg gttgaccttg
     1321 agctctttag tgagcaccgc gaccaggtca ttgggcgtaa cgccatcctt cttcccggca
     1381 cccacataga ttctcgagac ggtactctcc tggcggaccg gcgttgccga cgattcgggg
     1441 ctgccggtcc agagcttaaa gagcgccgcc gcaacgctga cagggtcgtg gcgctcgaac
     1501 aggggtgcca gcgtggctac tgaatgctcc agcccaccag ccgcgatagc ctgtccgatt
     1561 cggctgcgct gggccgcctc tgccgcgagc gccgcctcga ctgctcccgg cagctgaatc
     1621 ggacgtcgcg ggtccgcaat ggacgcgacg tagccttcag cgcccggtgg aaccagcagg
     1681 accacctctc ctccttgggc caactcccgc aggcgctctc cggtcggaag gtcgaatgcg
     1741 atgatggtct gcgccgtgac cggcccgcga gtcaccagtt gggcggctgg ttctctgagc
     1801 gagatcctct ccacaatcgc tcggtgatga cttcgatcca gcgtccaaat tgcgagcgag
     1861 accggatcga gcagctcgat cagatccgtc acggcgcgga ggcggccttc ccatgccgcc
     1921 gagaccgtac gagccggcga gggggcggta gggacactcg ccatttgcac agtgagcgcc
     1981 tttctggcgt accgctcggt caaggcgttt acccggttgc ggttggcggt gtagatgatg
     2041 cgttgcgctt ccttgggcaa gtcttgcatg agggggat
//
LOCUS       DASRPQ010001969         1185 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_854329, whole genome shotgun sequence.
ACCESSION   DASRPQ010001969 DASRPQ010000000
VERSION     DASRPQ010001969.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_854329"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..997)
                     /locus_tag="VFD73_22340"
     CDS             complement(<1..997)
                     /locus_tag="VFD73_22340"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HZI76714.1"
                     /translation="MSVAILRGDSILLARGYGLANVEHHVPATDSTVFSVGSLTKPFT
                     AEAIVLLSQEGKLKLDDPITKYLPEGAKVWSGVTIRQVLTHTSGIPEDTTLDDSRDYT
                     EADLVRSAARPLQFTPGAMESYSSTGYAMLGIVIHRVTGRPWSDFVRDRVFRPLGMRT
                     ARVNSDPDSVPRRATGYYLVSDTLQQADRVSRSINSMADCCLGFSALDLAHWAIGLNH
                     AKVIGQRGLDLLWTPVRLNKGGNYPYGLGWNLLEQRGYRRIGHSGSWLGFHATFQRYP
                     DFNLSVIVLLNLGQANSEGIAVGIAGLVEPALAAPHLLAKPLAGAPPTEINQLLKA"
BASE COUNT          219 a          346 c          415 g          205 t
ORIGIN      
        1 tcgctttgag caactgattg atctctgtcg gcggcgcacc ggctagcggc ttggccagga
       61 gatggggcgc ggcaagggca ggctcgacca gaccagcgat gcccaccgcg atgccttccg
      121 agttggcctg ccccagattc aacaacacga tgacagacaa gttgaagtcg gggtagcgct
      181 ggaaggtggc gtgaaagccg agccaggagc cactgtggcc gatccggcga tatccccttt
      241 gctcgagaag gttccagccg agaccgtagg gatagttccc gcctttgttg agccgaaccg
      301 gagtccagag cagatcgaga cccctttggc cgatcacctt cgcatgattg aggccgatcg
      361 cccagtgcgc cagatccaag gcgctgaagc caagacaaca gtccgccata ctattgatcg
      421 agcgcgatac ccggtcggcc tgctggagcg tgtcactcac caggtaatag ccggtggcgc
      481 ggcgcggcac gctgtccgga tcggagttca cccgcgccgt ccgcatgccg agcgggcgga
      541 agacgcgatc tcggacgaag tcgctccagg gtcgaccggt cactcgatgg atgacgatgc
      601 cgagcatcgc gtagccggtg ctgctgtagc tctccatcgc tcccggtgtg aactggaggg
      661 gccgggcggc cgagcggacc agatcggctt cggtgtagtc gcgggaatcg tcgagcgtgg
      721 tgtcctcagg gatgcccgag gtatgggtga ggacctgtcg aatggttacg cccgaccaca
      781 ccttcgcacc ttcaggcagg tacttggtga tgggatcgtc cagcttgagc ttgccctcct
      841 gtgacaggag gacgatggct tccgcggtga acggcttggt gagcgagccg acggaaaaga
      901 cggtgctgtc ggtggcgggg acgtgatgct ctacgttggc gaggccgtat ccgcgggcca
      961 ggaggatgct gtcgccccgg agaatggcga cggacatgcc ggggatccgt tgccgcgcaa
     1021 gctcggacct gatgaaccgg tcgacggtat cgggcagggt acgactctgg gcggcggcgc
     1081 tggagtatac gaatacaagg ccggcgatgc cgagggtggg ccgccagagg cggagcttag
     1141 acggctgcct ggcgctccag ctcatccacc agccgttcga ccagt
//
LOCUS       DASRPQ010001970         1103 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3701055, whole genome shotgun sequence.
ACCESSION   DASRPQ010001970 DASRPQ010000000
VERSION     DASRPQ010001970.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1103
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3701055"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..655
                     /locus_tag="VFD73_22345"
     CDS             <1..655
                     /locus_tag="VFD73_22345"
                     /inference="COORDINATES: protein motif:HMM:NF024685.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SIR2 family protein"
                     /protein_id="HZI76715.1"
                     /translation="RLPQTLEGLGLEKRYQLIVNTAFDTTLEQAFDDELEPYDLAIYM
                     AKGPDNGRFVHFPYEGAPVSIGVPNNYGKFPIGVDGELERTVIVKIHGAADGNIGDYS
                     IKENYVITEDHYIDYLSRSPIENLVPVQILEKLRDSHCLFLGYTVRDWNLRVFLKRIW
                     EGGRIDAQSWAVEPDPDALESQFWKRSGVDLYAADLADYVGQLHEQLSRRAPESAAQ"
     gene            652..>1103
                     /locus_tag="VFD73_22350"
     CDS             652..>1103
                     /locus_tag="VFD73_22350"
                     /inference="COORDINATES: protein motif:HMM:NF044287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76716.1"
                     /translation="MTTVDTVRDPASLTSPFVGLTSYAQENAPFFFGRDAEQRVLISN
                     LRASRLTLLYAQSGAGKSSVLRAGAAAKLAELARRSVEQRGFARYIPVVFSSWRDEPT
                     GELMAEIEKAIAPFLPEPSPPGRTLERLDEVIEAARDAAGATLLVVLD"
BASE COUNT          217 a          329 c          354 g          203 t
ORIGIN      
        1 ccggcttccc cagacgctcg aagggctggg cctggagaag cggtatcagc tcatcgtcaa
       61 cacggctttc gatacgacgc tggagcaggc gttcgacgac gagctggagc cctacgatct
      121 tgccatctac atggcgaaag gcccggataa tggcaggttc gtccacttcc cgtacgaggg
      181 tgctccggtg tctattggcg ttccgaacaa ttacgggaaa tttccgatcg gagtagatgg
      241 cgaactcgaa agaacggtga tcgtgaagat ccacggagcg gccgacggga acatcggtga
      301 ttatagcatt aaagagaatt acgtgatcac cgaagatcat tatattgact atctcagcag
      361 aagcccgatc gagaatctgg ttccagtgca gatcctcgag aagctcaggg acagccactg
      421 cctgttcctt ggatatacgg tgcgcgactg gaatctgcgc gttttcctga agcggatctg
      481 ggaagggggc cgcatcgatg cccaatcgtg ggctgtcgag ccagacccag atgccctgga
      541 gagtcaattc tggaagaggt ccggtgtgga cctttatgcg gccgacctcg ctgactacgt
      601 gggccagttg cacgagcagc tgagccggag agcgccggag agcgccgcac agtgaccacc
      661 gtcgacacgg tccgggatcc ggcgtccctg acgagtccct tcgtcgggct gacctcctac
      721 gcacaagaga acgccccgtt cttcttcggc cgcgacgctg agcagagggt gctgatcagc
      781 aatcttcgcg cttcccggct gacgctcttg tacgcccaga gcggggccgg gaagagttcc
      841 gtgctccgcg cgggcgccgc cgccaagctg gcggagctgg cccggcgcag cgtcgagcag
      901 cggggcttcg cccggtacat cccggtggtc ttcagctcct ggcgtgatga acccaccggc
      961 gaactgatgg ccgagatcga gaaggcgatc gccccattcc tgccggaacc ctcgccgccc
     1021 ggccgcacgc ttgagcggct ggacgaggtg atcgaggccg caagagacgc tgccggtgcg
     1081 accctgcttg tggtgcttga cca
//
LOCUS       DASRPQ010001971         1579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_539067, whole genome shotgun sequence.
ACCESSION   DASRPQ010001971 DASRPQ010000000
VERSION     DASRPQ010001971.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_539067"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..379
                     /locus_tag="VFD73_22355"
     CDS             <1..379
                     /locus_tag="VFD73_22355"
                     /inference="COORDINATES: protein motif:HMM:NF025382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4232 domain-containing protein"
                     /protein_id="HZI76717.1"
                     /translation="GTPCRMTGWPAVTGLTASGQATRLRHLQLSMFGAWHYSAPPPVV
                     ALQPGDSAYAIVAADDKPAGNSNRCPAPYARLRVSPPGDSGNVTISAWLPGAGSYLPS
                     CASANGSPTAGTSTITTLSSLPH"
     gene            1298..>1579
                     /locus_tag="VFD73_22360"
     CDS             1298..>1579
                     /locus_tag="VFD73_22360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76718.1"
                     /translation="MKIKIRHHDSSMPQEDGWSQMGDWLAELGDDSHTEPPGDAHAEA
                     GGTDDPWAEAFAQADARAARAQAEARAEAEARAQAEARAEAHGETSVTPT"
BASE COUNT          316 a          507 c          495 g          261 t
ORIGIN      
        1 cggtacccca tgtcgcatga ccggctggcc agccgtgacc ggactgacgg ctagcggaca
       61 ggcgacgcgc ctgcggcact tgcaattgag catgttcggc gcctggcact acagtgcgcc
      121 gccacctgtg gtagctcttc agccaggaga ttccgcctac gcgattgtgg cggccgacga
      181 taagccagcc gggaacagca accgctgtcc tgcgccatac gcgcgtctcc gggtgagccc
      241 gccgggcgat tcgggaaatg tgacgatctc cgcgtggctg cccggcgcag gctcctacct
      301 gccgtcatgt gcctcagcca acggctcacc gacggcggga acgtcgacga taacaacgct
      361 ttccagtctg ccgcactaat ctagctgaat ttaacttcaa aagcctacga ttggctgttg
      421 gcccgcatcg cacagatatc gaggtactgc gccagccggc aaaagaatgc ccgcagcaac
      481 cgataaattg catagaattc ggcgccatct gcagcgggta gtggttccgg ttggctaaca
      541 ccttgatcat gtcagtgccg acgagggcgc agcctggctc tcgacctggc tcccacctgc
      601 agacgacgtg aacccggcag cagcggacgt ctgtcctacc cagccggggg ggccgatggg
      661 accagcgtgt ctcggacacc cgcacgcggc gcaccggccg gaccagcaag gaccggcgca
      721 cgtgccgagc cgctgctgtc tgccagccga cggcaggact gcttccctgc tgtctgtgca
      781 caaacatgtg gatgacttgt gcgcaacggc gcccagcctg tgcataggcg gtggaaatgc
      841 tggggattcc gcaggctagc cggaaccaga agagggcatt tacctgggag agcgcgagtc
      901 atgcctgtgc atacagagaa aatcagtaat tatccacata ccacaccgta agaaatggta
      961 aatgagtcga atgtttatca gaggtttatc cggttgtgat atgacatgta gatcgtggta
     1021 atacttaagc ccagagagga tgagcccggc gctttttgaa ggggggtcta aaggtaacag
     1081 cggcgaacgc ctccggtaca cgccgtgcgc aggccggcag gtccggtacc ggctcatcac
     1141 agcgcccgac aatcccgcag tcgggtgtga tcggagctcg gcccgtctgg gacccccagc
     1201 ggccgcccgg tccatcattc cgctgcgtcg ctgtccctcg gcaggggggt tacacccgct
     1261 gcccggcgct tatccctgga tcgacgggag acctgacatg aagatcaaga tccgccatca
     1321 cgacagcagc atgccccagg aagacggctg gtcccagatg ggcgactggc ttgccgaact
     1381 cggcgacgat agccataccg agccgcccgg cgatgcccac gccgaagcag gcggtaccga
     1441 tgatccctgg gccgaagcct tcgctcaggc cgatgcccgc gctgcccggg ctcaggccga
     1501 agcccgcgcc gaggccgaag cccgggctca ggccgaagcc cgcgctgagg cgcatgggga
     1561 gacatccgtg acgccgacc
//
LOCUS       DASRPQ010001972         2045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4623254, whole genome shotgun sequence.
ACCESSION   DASRPQ010001972 DASRPQ010000000
VERSION     DASRPQ010001972.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4623254"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            94..999
                     /gene="ilvE"
                     /locus_tag="VFD73_22365"
     CDS             94..999
                     /gene="ilvE"
                     /locus_tag="VFD73_22365"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: protein motif:HMM:NF006185.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HZI76719.1"
                     /translation="MTVSAKPAAVPSGSDTVAPLIWLDGKWYDRGSAMVSVYDHGLLY
                     GDGVFEGIRVYGGKIFRLAEHIERLYDSAKAIWLTIPMPREQMASITEEAVRRSGIKE
                     AYIRHVVTRGVGDLGLDPRKCGTPTVIIIVDTIKLWPESVYEAGLNVVTAGTPIPQRE
                     SLSPRVKSLNYLAHILAKVEGIQAGADEVLMLDSAGMVAEGSGQNIFVVKHGRLRTPP
                     PFAGGLKGVTRDVVIELAGKAGYPVEETILNRYDVYTADEAFFTGTASEMVAIRQVDG
                     RLIGSGKAGPITRDLRARFHALVRS"
     gene            1020..1259
                     /locus_tag="VFD73_22370"
     CDS             1020..1259
                     /locus_tag="VFD73_22370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76720.1"
                     /translation="MAWRVLEHDGKSWNVSLAAERRPNSPQWNLVFSFRTSTAGQRSI
                     WAAYPLASSSKAALFAQADRISDKELLQLLSEQLT"
     gene            1328..1750
                     /locus_tag="VFD73_22375"
     CDS             1328..1750
                     /locus_tag="VFD73_22375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76721.1"
                     /translation="MSSTPLAERLRFAEFTLDRLPNGRCRARVGLTWRDSEQFTGEGE
                     GLASQAGELRCSAQACVVALGQAVQGGLSFELLGVKAVRAFDSTVIIVSLAVHGEGPG
                     GGQRVVGSYLTENDIARGAALAVLNATNRILGNRLFMR"
BASE COUNT          344 a          635 c          665 g          401 t
ORIGIN      
        1 agagggcgcg gggctccggt ggatgcgcat tagggtcagt cgtctgacga cttcccaata
       61 gccaagccct cctccattcc ttacattccg ctcatgacag tcagcgccaa gccggcagcc
      121 gttccttccg ggagtgatac cgtcgcacca ctcatctggc tcgacggtaa atggtatgac
      181 cgcgggtcgg cgatggtgtc ggtatacgat cacggcctgc tttatggtga tggggtcttc
      241 gagggcatcc gggtttacgg cgggaagatc ttccgcctgg cggagcacat cgagcggctc
      301 tacgactcgg ccaaggcgat ctggctgacc atcccgatgc cgcgggagca gatggcctcg
      361 atcaccgaag aagccgtccg ccgctccggc atcaaggaag cctacattcg gcacgtcgtg
      421 acccgcggag tcggtgacct cgggctcgac ccgcggaagt gcggaactcc cacggtcatc
      481 atcatcgtcg ataccatcaa gctctggccc gaatcggtgt acgaggcggg actcaacgtc
      541 gtcaccgccg gaacgccgat tcctcagcgc gagtcgctct ctccccgggt caagtcgctc
      601 aactatctgg cgcacattct ggccaaggtg gagggaattc aggcgggagc ggacgaggtg
      661 ctgatgctgg acagcgccgg aatggtggcc gagggatcgg gacagaacat cttcgtggtg
      721 aagcacggcc ggcttcgcac ccctccgccc ttcgccggcg gcttgaaagg tgtcacccgc
      781 gacgtggtga tcgagctcgc gggcaaggcg gggtatccgg tcgaagagac cattctcaac
      841 cggtacgatg tctacacggc ggatgaggcg ttctttaccg ggacggcgag cgaaatggtt
      901 gcgattcggc aggtcgacgg caggctgatc ggcagcggca aggcgggccc gatcactcgc
      961 gacctgcgcg cacgatttca tgcgctggtg cgcagctgat aacatcgggc tcttgaatca
     1021 tggcgtggcg ggtactggag cacgacggta aatcctggaa tgtctcacta gcggcggaac
     1081 ggcggcccaa ctctccccag tggaatctgg tgttctcgtt tcgcaccagc acggcagggc
     1141 agcgctcgat ctgggccgcc tatccgctgg cctcctcttc caaggccgcg ctgttcgcgc
     1201 aagccgaccg aatcagcgac aaagaattgt tgcagctgct ctccgaacaa ctcacctgac
     1261 tggcatgggg cttgcccttc ccggccgcgt gtcgctccct gaatttgaac ctgcccccag
     1321 gaccagcatg tcctcgactc cgcttgccga gcggttgcgt ttcgcggagt tcaccctcga
     1381 ccggctgccc aatgggcgct gccgggcgcg ggtcggtttg acctggaggg actcggagca
     1441 gtttaccgga gaaggcgagg gtctcgcgtc acaggcggga gaactgcgct gctcggcaca
     1501 ggcttgcgta gtcgcgctgg ggcaggcggt acagggcggg ctcagtttcg agctgcttgg
     1561 cgtgaaagcg gtgcgggcgt tcgattccac ggtcattatc gtgtcgcttg ccgttcatgg
     1621 agagggcccg ggcgggggac agcgagtggt gggttcctat cttacggaaa acgacattgc
     1681 tcgcggggct gcgctggcgg tgctgaacgc caccaaccga atcctgggaa accggttgtt
     1741 catgcggtag gccggccgcc ggcggcgggt ctcccgcgca aatacctgca cctctttcct
     1801 gtccgggagc ttgcctcagt tcctgcggtt tgcacgttga cgcgcgccag tcggcgctcc
     1861 gaaatatttc cgaaagccga gtggtccaac cgacagccgg ccccagggag tttgttcatg
     1921 cgctctgtgc ttctgctcct gccgttcgcc gcattcaccc ttggttgcgc tggtaacgcc
     1981 ggcaaccggc cggtttcgcc ggctgctggt tctccgttga ccggaaattc cgtccccact
     2041 gctcc
//
LOCUS       DASRPQ010001973         1030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3701624, whole genome shotgun sequence.
ACCESSION   DASRPQ010001973 DASRPQ010000000
VERSION     DASRPQ010001973.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1030
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3701624"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..665)
                     /locus_tag="VFD73_22380"
     CDS             complement(<1..665)
                     /locus_tag="VFD73_22380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76722.1"
                     /translation="MRPLGSRYIWLKLTLTVGSLLALLLLVQSVVTYDQVSRLLVSAE
                     LRRQAQQHVASLEREARRLGIRDPTELSQVLDDIRQDAAGAIAWVRIVDMAGHPLSQS
                     GNSSGLPFGEQRLRRALDGFTAVSEIRQTGARKVLVTVLALRLARRPPVLAGPPDPDR
                     GSVPRPVPRFVEMALYLDSASATFGRLRSNLAVSLSAAIGLLASMILLWLRFPHYVRG
                     KQL"
     gene            complement(675..>1030)
                     /locus_tag="VFD73_22385"
     CDS             complement(675..>1030)
                     /locus_tag="VFD73_22385"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZI76723.1"
                     /translation="RENTDFRRVLFTGKHAQLVVMCLEPGEQIGAEVHQNVDQFFRIE
                     QGAARFVFNEGSEHLVREGDVVVVPAGRYHNVINTSNTAPLKLSTLYSPPNHPEGTVH
                     KTKAEAEAAEVMEHR"
BASE COUNT          198 a          338 c          301 g          193 t
ORIGIN      
        1 tccaactgct ttccacgcac ataatgggga aaccggagcc acagcaggat catcgacgcg
       61 agcagtccga tcgcggctga caagctgaca gccagattgc tccgcagacg cccgaaggtt
      121 gcggaagcgc tgtccaggta gagggccatc tccacaaacc gcggaacggg ccggggcact
      181 gacccgcggt cgggatctgg cgggccggcc aacacaggag gccttcgcgc aagtcgcaac
      241 gcaaggacgg tgaccagcac tttgcgggct cccgtttggc ggatctcgga taccgcggtg
      301 aacccgtcca gtgcccgtcg cagtctctgc tcgccgaatg gcagtccaga cgagtttccg
      361 ctctgtgaca gaggatgacc cgccatgtcg acgatccgga cccaggcgat cgcaccagcc
      421 gcgtcctgcc ggatatcatc gaggacctgg ctcaactccg tcggatcccg gatgcccaac
      481 cggcgagcct ccctctcgag tgacgctaca tgctgctgcg cttgcctcct tagttccgcg
      541 ctgaccagaa gcctcgaaac ctggtcgtag gtaacgacgg actgtaccag taacaacagc
      601 gccagcaggg agcccactgt gagcgtgagc ttgagccaga tgtaacgcga gccgagtggc
      661 cgcattcgtc tcccttaacg gtgttccatc acctctgctg cctccgcctc cgccttggtc
      721 ttgtgcaccg tcccttcggg gtggttgggc ggagagtaga gcgtagacag cttcaaaggc
      781 gctgtgttcg acgtgttgat gacgttatgg tacctgcctg ccggaacgac gaccacgtcg
      841 ccctctctca ccaggtgctc tgacccctcg ttgaagacaa acctggccgc cccctgttca
      901 atgcggaaga actggtcgac gttctggtgc acctcggcac cgatttgttc ccccggttcc
      961 aggcacatca ccacaagctg ggcatgcttt ccagtgaata acactcggcg gaagtccgtg
     1021 ttctcccgag
//
LOCUS       DASRPQ010001974         1252 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3399106, whole genome shotgun sequence.
ACCESSION   DASRPQ010001974 DASRPQ010000000
VERSION     DASRPQ010001974.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3399106"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..1212)
                     /gene="dnaN"
                     /locus_tag="VFD73_22390"
     CDS             complement(106..1212)
                     /gene="dnaN"
                     /locus_tag="VFD73_22390"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HZI76724.1"
                     /translation="MKFTITRDQLQEGLTAVAAAIPAKTTLPVLSNVLVEATKQGVRL
                     SGTDLDIAVSTMVSADVDAEGAATLPAKKLVDIARELPPAAIRFTGASEQRVSIECGK
                     SRFKLLGLPREEFPSFPAVKFDGASKAEAGVVQKLINHVAFAASTEESRPILNGVLWE
                     LQPDRMRMVATNGHRLAKMDVPSTGSATADLIVPPKALDQIRRLFAADAEILIAKSDN
                     HIGFRSGGKLVFSRLIEGPYPPYENVIPRENDKSATVDRNAMMGALRRMSVVASDQTH
                     RIRLALSGGTCRFSVQTPDLGEAQDELTVAYEGEPLEIGFNATYLLEILKFMPTDEVR
                     FTFKAPERAATVEPVRWNDPASYMALVMPLRLVD"
BASE COUNT          212 a          398 c          407 g          235 t
ORIGIN      
        1 tccgcaggcg gtgctggact cgattcccgt ggtgattcca gttgacaccg atacggcgcg
       61 ggcagacacg gctgggcact agtggcagga agagccagcc gcctctcagt ctacaagcct
      121 gaggggcatc accaacgcca tatagctggc gggatcgttc catctgaccg gctcgacggt
      181 cgcagcccgc tccggagctt tgaacgtgaa ccggacttca tcggtgggca tgaacttcag
      241 gatctccagc aggtacgtcg cattgaagcc gatttccagc ggctcccctt cgtaggccac
      301 cgtcagctcg tcctgcgctt cacccaggtc gggggtctgc accgagaagc ggcaggtgcc
      361 gcccgacagg gcgagcctga tccggtgcgt ctggtcgctc gcgaccacgc tcatgcgccg
      421 cagggctccc atcatggcgt tccggtccac cgtcgccgac ttgtcgtttt cccgtgggat
      481 cacgttctcg tacggcgggt acgggccctc gatcagacgg gagaacacga gcttgccgcc
      541 ggagcggaat ccgatgtggt tgtcgctctt ggcgatcagg atttcggcgt cggccgcgaa
      601 gagccggcgg atctgatcca gggcctttgg gggcacgatc agatcggccg tggcggaccc
      661 cgtggacggg acatccatct tggccaggcg gtggccgttg gtcgccacca tccgcatccg
      721 gtcaggctga agctcccaga gcacgccgtt caggatgggg cggctctctt cggtggaagc
      781 cgcgaaggcc acgtggttga tcagtttctg gaccacaccc gcttcggcct tggacgcacc
      841 gtcgaacttg acggcgggga aggaggggaa ttcttcccgg ggcaggccca gcagcttgaa
      901 acgggatttc ccgcactcga tggacacgcg ctgctcggag gcgccggtaa accggatggc
      961 cgcgggaggg agctcccggg cgatatccac gagcttcttc gccggcaggg tggctgcccc
     1021 ttcggcatcc acatcggccg agaccatggt gctcacggcg atgtccaggt cggtgcccga
     1081 aagccggacc ccctgcttgg tggcctccac cagcacgttg gagagcacgg gcagagtggt
     1141 cttggctgga atcgccgccg ccaccgccgt caggccttcc tgcagctgat cccgcgtgat
     1201 cgtgaacttc atttatcccc aggaaaagaa gcttttactt ctctatatat aa
//
LOCUS       DASRPQ010001975         1335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3399135, whole genome shotgun sequence.
ACCESSION   DASRPQ010001975 DASRPQ010000000
VERSION     DASRPQ010001975.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3399135"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..1154
                     /locus_tag="VFD73_22395"
     CDS             171..1154
                     /locus_tag="VFD73_22395"
                     /inference="COORDINATES: protein motif:HMM:NF015948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF362 domain-containing protein"
                     /protein_id="HZI76725.1"
                     /translation="MDQKLTRREWFTAAAAGAGIAAAAGCNRDAPLTPSQVSVVRAPA
                     YDQTLYDTVRRLLAAHQVDVRGKNVVLKPNLVEFEPESSINTHPILVHALMEGFTAMG
                     AASVRIAEGPGHRRNTLDLADAAGYFHTIPQFEDRFTDLNLDDVTRIRPARQFSRLPK
                     LYLTNTVLGADLLVSVAKMKTHHWTGATLSMKNLFGTVPSGVYGWPKNVLHWAGIHEC
                     IADLHAAYPRKFAIVDGIVGMEGDGPINGVSKRAGVLVAGDDPVAVDATCCRIMKIDP
                     YRIGYLRLAAGGRTAHMMERNIHQAGETIASVATAFQLPPAFESYRLGSTS"
     gene            1151..>1335
                     /locus_tag="VFD73_22400"
     CDS             1151..>1335
                     /locus_tag="VFD73_22400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76726.1"
                     /translation="MTGILSRRPVLFPAISILLLVPCYWQPRLQAGDLSSHIYNAWMS
                     QLIESGRTDGLMMVRQTT"
BASE COUNT          247 a          411 c          443 g          234 t
ORIGIN      
        1 tgccggtcgg ccgatgcgtt gaactggctt cgattgggat tgatggccca cgaccagttg
       61 cctgcagagt attgcgcacc cgcgcaggtg acgttccgca cgatcccgga tgcgtgcatg
      121 gatcttctgg tgaaatcggg gcgcgatggc gggacgttct ggagctgacg atggatcaga
      181 aactgacaag gcgtgaatgg ttcaccgctg cggcggcagg cgcggggatc gcggcagcag
      241 ccggctgcaa ccgggatgcg ccgctgactc catcgcaagt ctcggtggtt cgggctcccg
      301 cctacgatca aaccctctac gacaccgtac gccgcctgct ggccgcgcac caagtggacg
      361 tgcgtgggaa gaacgtggtt ctgaagccga acctggtgga gttcgagccc gagagcagca
      421 tcaatacgca tcccatcctg gtgcacgccc tgatggaggg cttcacggcg atgggcgcag
      481 ccagcgtccg catcgcggag ggaccgggtc accggcgcaa cacgctggac ctggcggatg
      541 ccgcaggcta cttccacacc ataccccagt tcgaagaccg gttcacggac ctcaacctgg
      601 acgacgtcac gcggatccgg ccggcccggc agttctcgcg ccttccgaag ctctacctga
      661 cgaatacagt gctcggagcc gacctgctgg tatcggtggc caagatgaag acgcaccact
      721 ggacgggggc caccctgtcc atgaagaacc tgttcggcac ggtgccgagc ggagtctacg
      781 gctggcccaa gaacgtgctg cactgggcgg ggattcacga gtgcatcgcc gacctgcacg
      841 ccgcgtatcc gcggaagttc gcgatcgtcg atgggatcgt gggcatggaa ggggacgggc
      901 cgatcaacgg agtttcgaaa agggcggggg tgctggtggc cggcgacgac ccggttgcgg
      961 tggacgccac atgctgccgc atcatgaaaa tcgacccgta ccggatcggc tacctccggc
     1021 tggcggcggg cggtcgcacc gctcacatga tggagcgcaa tatccatcag gccggagaga
     1081 cgattgcgag cgtagcgacc gccttccaac ttcctcctgc cttcgagagc tatcgactgg
     1141 gttcgacgtc atgacaggaa ttctcagtcg caggccggtg ctcttcccgg cgatatcgat
     1201 tctgctgctc gtgccgtgct actggcagcc gcgcctgcag gccggcgacc tttccagtca
     1261 tatctacaat gcctggatgt cccagctgat cgagagcggg cggaccgacg gtttgatgat
     1321 ggtccggcag acgac
//
LOCUS       DASRPQ010001976         2636 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4623710, whole genome shotgun sequence.
ACCESSION   DASRPQ010001976 DASRPQ010000000
VERSION     DASRPQ010001976.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2636
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4623710"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..426)
                     /locus_tag="VFD73_22405"
     CDS             complement(<1..426)
                     /locus_tag="VFD73_22405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76727.1"
                     /translation="MIAILALRHLLVRKLRTLFLLLGFSLGVGVMIVLLSVGEAMLEQ
                     SRDATLIGGGELTILPLGIDIEAMRTGGISAMFFGIDRSRFLVRQVLGGSRHRDMIRA
                     VSPEIEGKLLYLHRGAVTVPVRAGGEIPSRAAAAGAKLDL"
     gene            complement(423..1145)
                     /locus_tag="VFD73_22410"
     CDS             complement(423..1145)
                     /locus_tag="VFD73_22410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI76728.1"
                     /translation="MTSVLVARDLRKDYPMNGEVVHALRGVSLEIEAGEYVAIAGPSG
                     CGKSTLLQLIGGIDTATSGAVEILGTPISVLSDAELTRLRLTRLGFVFQRFHLLPVLT
                     ARENVELPMAEAGVGRRERRTRALELLGYVGLAHRADHRATQLSGGEMQRVALARALA
                     NHPAVLLADEPTGELDAATGQEILALFHRVNRDGTTLVVVTHDETLAAEAGRVIHMLD
                     GRIDPRGAPAHHPAAAQPLTRL"
     gene            complement(1142..2335)
                     /locus_tag="VFD73_22415"
     CDS             complement(1142..2335)
                     /locus_tag="VFD73_22415"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HZI76729.1"
                     /translation="MSGLGWGWKSLRRYRVRTVLSIAGIAISAAMLLDMVMLSGGIEQ
                     SFAELLLARGYQIRLTPKGTLPFDTDATIPDIDRLVALLRSNRSIERAGAVLGASLYG
                     RRGDSLVTLFGYGIQPDAQALYQLDAGSDLSPDDTTGVLLSAPAASRLGAQIGDTVRL
                     LGRLDPQAVTSSAGRSLAVRGLVHWVYDSEGQPSIGTVLSVMQHLAGPQLNDKASLIM
                     VKARHDSEATAVAARLRQTLPQLEVSSVADLVRQFKQRLVYFRQLSYILASVSLIVTV
                     LLVATLLTITVNQRLAEIATLRAIGISRNTIVGQVLLEGTILTLIGTGLGIVLGLVTA
                     RYLDSILTSFPGLPAAFSFFVPRRASLTTAGLVLLFTGTAAGLYPAWLAARLPIAATL
                     RAEAT"
     gene            complement(2332..>2636)
                     /locus_tag="VFD73_22420"
     CDS             complement(2332..>2636)
                     /locus_tag="VFD73_22420"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HZI76730.1"
                     /translation="AAMMRFVGVRRRTIFGALLLEALAIAAVGSLLGTGLAYLACAAT
                     NAYYRHFFNTTLTFSIITPELVSFSIAISLIMGTAAGAMAAWRLVRTPPLILWGRG"
BASE COUNT          543 a          851 c          836 g          406 t
ORIGIN      
        1 gagatcgagc ttggcgcccg ccgccgccgc gcggctgggt atctctcctc ccgctcggac
       61 cggtacagtg accgctccgc ggtgcagata caacagcttg ccttcgattt ccggggagac
      121 ggcccgaatc atatcgcggt gacgagaccc tcccagcacc tggcgcacga gaaagcgaga
      181 gcgatcgatg ccaaagaaca tcgcgctgat gcccccagtt cgcatcgcct cgatatcaat
      241 gcccagagga aggatggtca actcgccgcc tccgatcagc gtcgcgtcac gagattgctc
      301 gagcatcgcc tcaccgaccg agagcagcac gatcatcacc ccgacgccca gtgaaaagcc
      361 cagcagcaga aacagggttc ggagcttccg caccagcagg tggcgcaacg ccagtatggc
      421 gatcacagtc gtgtcagcgg ctgagcagcc gcagggtgat gcgcgggggc gccccgagga
      481 tcgatccggc catcgagcat gtgaatcacc cgtccggctt cggcggcgag ggtttcgtca
      541 tgggtgacca ccacgagcgt tgttccgtcc cggttgaccc ggtggaacaa ggccagaatt
      601 tcctgccccg tggccgcgtc caactccccc gtaggctcat ctgccaggag gaccgccgga
      661 tgattcgcca gcgcgcgggc gagggcgaca cgttgcatct caccgccgga gagttgagtc
      721 gcgcgatgat cggcgcgatg agcaagcccc acatagccga gcagctccag ggctcgggtg
      781 cgccgctctc ttcggcccac ccccgcctcg gccatcggca gctcgacgtt ctcgcgagcg
      841 gtaagcaccg gcagcagatg aaaccgctga aagacaaagc ccagacgggt caatcgaagc
      901 cgggtgagct cggcatcgga caggacactg atgggtgtgc ccagaatctc caccgctccc
      961 gaagtggcgg tatcgatgcc gccgatcagc tgcagcaaag tggatttgcc gcacccagac
     1021 ggaccggcga tcgcgacata ctcgcctgcc tcgatttcga gcgagacgcc ccgaagagcg
     1081 tggaccacct caccgttcat tggatagtcc ttgcgcagat cccgggcgac caggaccgat
     1141 gtcacgtggc ctccgccctg agggttgccg caatcggaag acgtgcagcc aaccacgcag
     1201 ggtaaaggcc tgcagctgta ccggtgaaga ggagaaccag tccggcggtc gtcaggctgg
     1261 ctcgacgggg gacgaagaag gaaaatgccg ccggaagccc aggaaaactg gtcagaatgc
     1321 tatcgaggta acgagccgtc accagaccga ggacaatccc gagcccggta ccgatcagcg
     1381 tcaggatcgt tccctcgagg aggacctggc cgacgatggt gttccgggag atcccgattg
     1441 cgcggagggt tgcaatctcg gccagccgct gattcacggt aatggtgagg agagtggcca
     1501 ccagcagaac ggtcacgatc agactcacac tggccaggat gtaggacagc tggcggaagt
     1561 acaccagccg ctgcttgaat tggcgaacca ggtcggccac gctgctgacc tccagctgcg
     1621 ggagcgtttg tcgaaggcgg gcggcgactg ctgtggcctc cgaatcgtgc cgcgccttga
     1681 ccatgatcaa cgaggccttg tcgttgagtt gcgggccagc caaatgctgc atcaccgaca
     1741 ggaccgttcc gatcgagggt tgcccctcgg agtcgtagac ccagtgcacc agcccacgca
     1801 ccgcgaggct gcggccggca gaggatgtca cggcctgggg atccaatcgt ccgagcaggc
     1861 gaaccgtgtc accaatctgg gcccccagcc gggaagctgc cggcgcactc aggagcacac
     1921 cggtggtatc gtccggcgac agatcgcttc ctgcatccag ctgatagagc gcctgggcat
     1981 ccggttgtat cccgtaccca aacagcgtca ccagcgagtc gccccgtcga ccatacagcg
     2041 aggctcccag caccgccccg gcgcgctcga tggaacggtt gctcctcaga agcgctacca
     2101 ggcggtcgat gtctggaatg gttgcgtcgg tatcgaatgg aagcgtgccc ttgggggtca
     2161 gccggatctg gtaaccgcgt gccagcaata gctccgcaaa tgactgctcg atcccgccgc
     2221 tcagcatgac catgtccagg agcatcgctg ccgaaatggc gatgcccgcg atcgacagca
     2281 ccgtccgcac ccggtagcgg cggagactct tccatcccca tcccagaccg ctcatcctcg
     2341 gccccacaaa atcagaggag gtgtgcgcac cagacgccag gctgccatgg cgccggcggc
     2401 agtgcccatg ataagggaga tggcgatact gaaggacacc agctccgggg taatgatcga
     2461 gaacgtcagg gtcgtgttga agaagtgccg gtagtaggcg ttcgtcgccg cacaggcgag
     2521 ataagcgagg ccggttccga gcagcgaccc cactgcggca atggccagtg cttccagaag
     2581 cagggcgcca aagatggtgc gccgccggac ccctacaaag cgcatcatcg cggcgt
//
LOCUS       DASRPQ010001977         1679 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3046280, whole genome shotgun sequence.
ACCESSION   DASRPQ010001977 DASRPQ010000000
VERSION     DASRPQ010001977.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1679
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3046280"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..241)
                     /locus_tag="VFD73_22425"
     CDS             complement(<1..241)
                     /locus_tag="VFD73_22425"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI76731.1"
                     /translation="MSLLALERVTKRFNGVTAVDDVTFTVDRGQVVGFLGPNGAGKST
                     TMRMITQYFEPDAGNIRLDGVALDEAGRDAKRRIGF"
     gene            complement(319..846)
                     /locus_tag="VFD73_22430"
     CDS             complement(319..846)
                     /locus_tag="VFD73_22430"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF002634.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HZI76732.1"
                     /translation="MSAVDLQVQRTLRAIPDYPKPGILFQDITPVLRDGGLFRAVIAE
                     MVRPFADAGITHVLGIEARGFILGGAVATLLGAGFVPARKPGKLPWDRTTETYDLEYG
                     SDALEAHRDAVSRGDRVLVVDDVLATGGTARAAGQLVRSLGADLAGWSFLLEIAALQG
                     RKRLNGALCHVVTQR"
     gene            complement(860..1129)
                     /locus_tag="VFD73_22435"
     CDS             complement(860..1129)
                     /locus_tag="VFD73_22435"
                     /inference="COORDINATES: protein motif:HMM:NF012911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HZI76733.1"
                     /translation="MSTRFLVSGMVQGVGFRWFVARHARSLGFAGYARNLPDGRVEVV
                     VSGPDEALPEFEHLLRRGPANAQVEALERSSEPGPASPANSFDII"
     gene            complement(1126..>1679)
                     /locus_tag="VFD73_22440"
     CDS             complement(1126..>1679)
                     /locus_tag="VFD73_22440"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HZI76734.1"
                     /translation="LILFVIVFCETGLVVTPFLPGDSLLFAAGTFAALGSLDVRLLLA
                     LLFAAAVLGNSVNYTVGSYIGPRAFGGNVRFLRQEYLDRTRKFYARHGGKTIILAQFA
                     PIIRTFAPFVAGVGGMSYPRFITYNVLGAALWVSLFVLGGYFFGSIPTVRENFSLVIL
                     AIIAISLTPIMVEVVRSRRSRPA"
BASE COUNT          362 a          531 c          510 g          276 t
ORIGIN      
        1 gaaatccaat ccggcgcttg gcatctcgcc cagcctcatc cagggccacg ccatccagcc
       61 gtatgttccc ggcatccggc tcgaagtact gggtgatcat gcgcatggtg gtggactttc
      121 cggcgccgtt gggccccaga aaacccacca cctggccgcg gtccaccgtg aaggtgacgt
      181 cgtctacggc cgttacacca ttgaagcgct tggtcacgcg ctcgagggca agaagcgaca
      241 tagccagtca atgcctagga ggatttggtc gtcgctggag atttaaaaag gtggcacggc
      301 agcttcaagg gccgcggatc agcgttgcgt gaccacgtga cagagtgccc cattcaggcg
      361 tttgcggcct tgcagagcag cgatttccag aagaaagctc cagcccgcca gatctgcccc
      421 gaggctccgc accagctgcc cggccgcccg ggcagtccct cccgtggcga ggacatcgtc
      481 aaccaccagc acccgatcgc ctcggctcac agcatcgcga tgggcctcga gcgcgtcgct
      541 cccatattcg agatcgtacg tttcggtggt tcgatcccag gggagcttgc cgggctttcg
      601 cgccggaacg aagccggctc ccagaagcgt tgccactgcg ccgccgagga tgaatcccct
      661 ggcttcaatc ccgagcacat gggtaatgcc ggcatctgca aatggacgga ccatctcggc
      721 aatgaccgct cgaaacaacc ctccgtcccg gagaaccgga gtgatgtcct ggaagagaat
      781 gccgggttta gggtaatccg gaatggcgcg aagcgttcgc tgaacttgca ggtcgactgc
      841 actcatcgtc gggcgcgcgt cagatgatgt cgaagctgtt ggcgggagag gccggacccg
      901 gctcggacga gcgctctaat gcctcgactt gtgcattggc cggcccccgg cggagcagat
      961 gctcgaattc tggcagggcc tcatcgggcc cgctcaccac cacctcgact ctcccgtccg
     1021 gaaggtttct ggcgtacccg gcaaagccca acgaccgggc atgccgcgcc acgaaccagc
     1081 ggaacccgac cccttgcacc atcccggaca caagaaagcg ggtgctcatg ctggccggct
     1141 ccttcgtgac cgaaccactt ccaccataat aggagtgagt gaaatggcga tgatggccag
     1201 gattaccagg ctgaaatttt ctcgcaccgt aggaatgctg ccgaagaaat agccgcctaa
     1261 cacaaacagg ctcacccaaa gggcggcacc cagcacatta taggtgatga accgaggata
     1321 gctcatgcca cctacgccgg cgacgaacgg cgcaaaggtg cggatgatcg gggcgaactg
     1381 tgccaggatg atggtctttc cgccatgccg cgcatagaac tttcgggtgc gatcgagata
     1441 ctcctgccgg aggaaccgga cgtttcctcc gaaggcgcga ggcccgatgt acgacccaac
     1501 cgtgtagttc acggagtttc cgaggaccgc ggccgcaaac agcagcgcca gcagcagtcg
     1561 cacgtcgagt gagccgaggg cggcaaaggt gccggccgcg aagagcagag aatccccggg
     1621 caggaacggc gtcacgacga ggcccgtctc gcaaaacaca atgacaaaca ggatgagat
//
LOCUS       DASRPQ010001978         1815 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4623801, whole genome shotgun sequence.
ACCESSION   DASRPQ010001978 DASRPQ010000000
VERSION     DASRPQ010001978.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4623801"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            882..1028
                     /locus_tag="VFD73_22445"
     CDS             882..1028
                     /locus_tag="VFD73_22445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76735.1"
                     /translation="MGLLKDVLWVYARYFASVLAGGAILGAVGWLIYCLFGWCRRRWP
                     GPRG"
     gene            1077..1283
                     /locus_tag="VFD73_22450"
     CDS             1077..1283
                     /locus_tag="VFD73_22450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76736.1"
                     /translation="MRNVTRLALRRTASLTEASNGIKALVELLMAGDPFDAIVLDLRL
                     DVARLSCVTTGRWASSRRQTEATA"
     gene            complement(1494..>1815)
                     /locus_tag="VFD73_22455"
     CDS             complement(1494..>1815)
                     /locus_tag="VFD73_22455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76737.1"
                     /translation="LVMGAPAAASAYRFALRALLVLNAIALALLVSDLRAALADARGP
                     RVLAVLGVLALLGGILVPLWLLGAAARVPEAIALALILMGAVVVRREVTRLPHSLGKA
                     RPGG"
BASE COUNT          321 a          599 c          582 g          313 t
ORIGIN      
        1 tccgcgtgtc gggggttcga ttccctctct ggccatcaca gcacatcaac aattggcagc
       61 agcggcaagg agatacgggt gatccgtgtc cttgccgctg tttgccgata gcctattcac
      121 ggctcgaagt ggtcacctca gcccgggacc aggactggcc tcggcgccgc gagccctggt
      181 ccgtcgcacg tatgcgaccc gccaacccgt gggtagcgag ctggctggta ggcgccgctt
      241 ctgcacttct ccaccggcaa cgtggatcgc aagaggcttg ttcgtcctat gtccatcccc
      301 tcgcggccaa tcaattccca ggctggtacg ctgtagtact cggttccccg accctcgtcg
      361 tggtaaagtc cggttgccaa tctaccctga gggcctatgc acgctcccct gtgaccatcc
      421 cttgtcgaac gatgaccccg gcgctctggc cgtgaccgct cgatggtccc aagtgcgttc
      481 gagtattttg ctaggagacg gtgggagcta ttcccagttg ggccgagatc agcgaggcgt
      541 tgtggatctc cagaagtgtc gccgctgcgg aagcatcgtg gcatcaagtg cgagggcatg
      601 tccgcagtgc gggacgagac tcgcggcagg ccacgcacga acgcttgtcc tcgtgttcgc
      661 ttttcttctg ctcatttttg ggtatttacg ccatcctcag ttgattcctg gacgaccgcc
      721 agcaatcgaa ccgccggaag ccggtgccct ccgtgctgac ctcgaacgtg agagagatgt
      781 cagattagac tgagatcccg caccgcccca aaaccactcg ccgcgtgacc tctcggctcg
      841 gaacctgcac tagcagccgc gaacgccgaa aacgagtgcc tgtggggctg ctcaaggacg
      901 tgctctgggt gtatgcgcgg tatttcgcct cggtgctcgc cggcggtgca atccttggcg
      961 cggttggctg gctgatttac tgcttgttcg gctggtgtcg caggcggtgg cccgggccgc
     1021 gcggatgagc tggacccgag ggcctgcgat tgccggtcct ggatgactct gatttgatgc
     1081 gcaacgtgac ccgactcgca ttgcggcgca ccgcctccct cacggaggcc agcaacggca
     1141 tcaaggcgtt ggtcgaactc ttaatggccg gcgatccgtt cgacgccatc gtgctggatc
     1201 tccgccttga cgtcgcgcgc ctcagctgcg tgacaacagg gcgttgggcg tcaagtcgac
     1261 gtcaaaccga agccacggct tgagtcatca cgaacacacc gcatcagggg aacgccaggc
     1321 caccgaagca gaggaaccgt gcgtggacgc cgagcagcaa gccgaggaac agaagaatga
     1381 ggtcgccata atcgaggtac gggccgctcg ggtgctggag gagggtctcg aacgcgaagg
     1441 cctgccgatg gaagcgggca tggccccgcg gcgcgagcga ggcagtcgcg cgatcagccg
     1501 cccggccgcg ccttccccag gctatgcggc agccgcgtca cctcccgccg taccaccacc
     1561 gcccccatca ggatcagcgc cagggcgatg gcctctggca cccgagcggc ggcccccaag
     1621 agccagagcg gcacgaggat cccgcccagc agcgccagca cgccgagcac ggccaggacg
     1681 cgcggccccc gcgcatcggc caaggccgcc cggagatcgg acacgaggag ggcgagagcg
     1741 atcgcgttga gcaccagcag cgctctcagc gcgaaccggt aggctgacgc cgcggcgggc
     1801 gcacccatca cgagg
//
LOCUS       DASRPQ010001979         1193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1164402, whole genome shotgun sequence.
ACCESSION   DASRPQ010001979 DASRPQ010000000
VERSION     DASRPQ010001979.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1164402"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..227)
                     /locus_tag="VFD73_22460"
     CDS             complement(<1..227)
                     /locus_tag="VFD73_22460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76738.1"
                     /translation="MARLLLPDRTGPRIGNEMMLVVAPGWLSDLFNSWFWHVPYGLRV
                     LLLVFSAAWLALLAHELSHALAARLLGVRIW"
     gene            complement(282..>1193)
                     /locus_tag="VFD73_22465"
     CDS             complement(282..>1193)
                     /locus_tag="VFD73_22465"
                     /inference="COORDINATES: protein motif:HMM:NF025736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HZI76739.1"
                     /translation="VILPLLLAAVVHGRHTVRDAQGRWVPFPAGWLEGWRKARRTHLS
                     NATLARIAVLAMVVPAFHRAFTVMKSSMVLLVPFWADPYLLRLERFLHGGLPQSYLAP
                     WLAHDGFIITADRLYFLWHYILLATVFWVAMQSDPAYRLRALLAFVATWVLLGNVLAC
                     LLDSAGPWAYGAVTGLPSPYTGLLARLREANATAPVFALVTEERLWSLYRAGRIGLGA
                     GISAMPSLHVAMPVLGAFIAYPRSKVMAGLLGTYALIIMVSSVALAWHYAIDGYLSLL
                     LVPLIWAGAGRIVRWAEIRDGSLRTGP"
BASE COUNT          269 a          379 c          391 g          154 t
ORIGIN      
        1 ctccagatgc gaacgccgag cagccgcgct gccagggcgt ggctgagctc atgcgccagc
       61 agggccaacc aggctgccga gaacaccagc agcagcaccc ggaggccgta gggaacatgc
      121 cagaaccacg agttgaataa atccgacagc cagcctgggg caactacgag catcatctca
      181 tttccaatgc gcgggccggt acgatccggg agaagcaagc gggccacaac cggaatgttg
      241 gcgaatttcg cccgggtgca agcggcggcg ccagtcagct cctaaggacc cgtccgaagg
      301 ctcccatctc ggatttcggc ccaacgaact atccggcccg ccccagccca gatcaacggg
      361 accagaagca gcgagagata gccgtcgatg gcatagtgcc aggccagagc caccgagctc
      421 accatgatga tcagcgcgta ggtgccgagc agtccggcca tcaccttcga tctgggataa
      481 gcgatgaacg ctcccagcac cggcatggcg acgtgaaggc ttggcatggc cgatattcct
      541 gcaccgaggc cgatccggcc ggcacggtac aggctccaca gccgttcttc cgtcaccagc
      601 gcgaaaacag gcgcggtagc gttcgcctct cggagtcgag cgagcaggcc agtgtaggga
      661 gaggggagtc cggtgacggc cccataggcc caagggcctg ccgagtcgag gagacaggca
      721 agcacgtttc caaggagtac ccacgtggcc acaaacgcca gcagcgctcg cagccggtag
      781 gcagggtccg actgcatggc gacccagaag accgttgcca gcagaatgta gtgccataga
      841 aagtagagcc ggtcggccgt gatgatgaat ccatcgtggg ccagccaagg agccagatac
      901 gattgtggaa ggccgccgtg gaggaagcgc tccaaccgga gcagataggg atcggcccag
      961 aacgggacca gcaggaccat cgatgacttc atcaccgtga acgcgcggtg aaacgcgggc
     1021 accaccatcg cgaggaccgc gatgcgcgcg agggtcgcgt tgctgagatg ggtccgacgc
     1081 gccttgcgcc acccctcgag ccagccggca gggaacggca cccagcggcc ctgcgcgtca
     1141 cggacggtgt gtcggccgtg caccacggct gccagcagca atgggaggat cac
//
LOCUS       DASRPQ010001980         1722 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3993806, whole genome shotgun sequence.
ACCESSION   DASRPQ010001980 DASRPQ010000000
VERSION     DASRPQ010001980.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3993806"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(90..653)
                     /gene="msrA"
                     /locus_tag="VFD73_22470"
     CDS             complement(90..653)
                     /gene="msrA"
                     /locus_tag="VFD73_22470"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HZI76740.1"
                     /translation="MSEPQGEEAMEGEKTVTRSGVADARQTEVAVLAGGCFWGVEEIL
                     RAVPGVIDTDVGYTGGWVKNPTYEDTHDSKSGHAEAIRVTFDPTVLSYEDLLEKWFFK
                     LHDPTTLNRQGNDVGTQYRSAIFPQTPEQQAIAERVKARVDASGKWKRPVTTSIEPAS
                     TWYSAESYHQDYLRKHPGGYTCHFMRD"
     gene            complement(688..1350)
                     /locus_tag="VFD73_22475"
     CDS             complement(688..1350)
                     /locus_tag="VFD73_22475"
                     /inference="COORDINATES: protein motif:HMM:NF015438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HZI76741.1"
                     /translation="MKVLSVNVGVPREVQWRDDRIATAIHKSPVEGRIAAKRLNLDGD
                     RQADLAVHGGPEKAIYAYPIEHYAYWREELPGVPLPSGVFGENLTIEGLLEPMVRVGD
                     ILRIGTTELVVTQPRMPCFKLNARFQRGDMVKRFLRSGRTGFYLAVLQEGQLGARDDI
                     ALTPSREQAVTIAEVAALYTTERQNQDLLHRAIRTPALPEAWREHFRVQLSQLGASAR
                     SG"
     gene            1539..>1722
                     /locus_tag="VFD73_22480"
     CDS             1539..>1722
                     /locus_tag="VFD73_22480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76742.1"
                     /translation="MILFAVLGWSNAHHWDEYFYLFSSLMHSPSELLRYEMQTAIFPP
                     GFFTEKIGHVLLLRFLI"
BASE COUNT          308 a          554 c          508 g          352 t
ORIGIN      
        1 gcagccggtt gccagcaaca agaccgcgtc ggggcgagcg cagaaccgga gagtggagct
       61 gaagcgcatc gattgagcag tcggctgagc tagtccctca tgaaatggca ggtatacccg
      121 cccgggtgct tgcgcagata atcctggtgg taactctccg cactgtacca ggtggatgcc
      181 ggctcgatcg acgtcgtgac cggccgcttc cacttgcctg atgcatcaac ccgtgccttg
      241 acccgctccg cgattgcctg ttgctccggc gtctgcggaa agatcgccga gcggtattgg
      301 gtgccgacat cgttgccctg gcggttgagc gtcgtcgggt cgtgcagttt gaagaaccac
      361 ttctccagca ggtcctcgta actcagcacc gtgggatcga aggtcacccg gatcgcctcg
      421 gcgtgacccg acttgctgtc gtgggtgtct tcataggtcg ggtttttcac ccagccaccg
      481 gtgtagccca cgtcggtgtc gattacgccc ggaacggcgc gcaggatttc ctccacaccc
      541 cagaagcacc cgccggccag cacggctact tcggtctgcc tggcatccgc cacgcccgac
      601 cgcgtcactg tcttttcccc ttccatcgct tcttctcctt gtggttcgct cacccagtgt
      661 cttcggcgca gccgccagag aggaaaatta ccctgatcgg gcggaggcgc cgagctgcga
      721 gagttgcacc cgaaaatgct cgcgccaggc ctcgggcaaa gccggcgtcc gaatggcgcg
      781 atgcaggaga tcctggttct gccgctcggt ggtatatagg gccgctacct cggctatggt
      841 gacggcttgt tcgcgagaag gagtcaaagc aatatcgtca cgagcaccga gctggccttc
      901 ctggaggaca gcgaggtaga acccggtgcg gccgctccgc aggaagcgct ttaccatatc
      961 gccccgctga aaacgggcat tcagcttgaa gcagggcatc cgcggctggg tgaccaccag
     1021 ctcagtggtc ccgatccgta gaatgtcgcc gacccgcacc atcggctcta ggagcccctc
     1081 gatggtcagg ttttccccga acacacccga gggcagtggg acgccgggaa gctcctcacg
     1141 ccagtaggca tagtgctcga tagggtaggc atagatcgcc ttctctggac cgccatgaac
     1201 cgccagatcg gcctgacggt cgccgtcgag gttcaggcgt ttggccgcaa tccgcccttc
     1261 aaccggcgac ttatggatgg ccgtagcaat gcgatcatcc cgccactgga cctcacgggg
     1321 aacgccgaca ttgaccgaca gaaccttcat ggtcaggcct tcctcactcg gataaagtgg
     1381 cggggtaccg caacggcgga ctctctgtcc cgtgctgttg caacgcttgg cccccgccgc
     1441 gagttccggg aggaactgat cgactagctt ccacggatcc tctagggtaa ggtcgcttgg
     1501 tgccgatcgc gcgaactcaa ctatttgtcc tcggtgccgt gatactcttt gcagtgctcg
     1561 gctggagcaa cgcgcaccac tgggacgagt acttctatct gttctcatcg ttgatgcact
     1621 cgccatccga gctgctccgc tatgagatgc agacggccat tttccctccc ggctttttca
     1681 ccgagaagat cggccacgtc ctactcctgc gctttctcat cc
//
LOCUS       DASRPQ010001981         1220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_855496, whole genome shotgun sequence.
ACCESSION   DASRPQ010001981 DASRPQ010000000
VERSION     DASRPQ010001981.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_855496"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..205)
                     /locus_tag="VFD73_22485"
     CDS             complement(<1..205)
                     /locus_tag="VFD73_22485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76743.1"
                     /translation="MSIRDEGPGQPDSRLDAQLRLVLSGIPDVLEGLEGAAVHTADPD
                     NVHYLHRKRHLLVRDSDADRVTSV"
     gene            208..>1220
                     /locus_tag="VFD73_22490"
     CDS             208..>1220
                     /locus_tag="VFD73_22490"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI76744.1"
                     /translation="MTPLPFDWHRELSSIIGVTPGDSDTGDRLSGPARLLPLALSRPG
                     DAVLAARWLLDGQPSAYEASLAHHAIGIVLRDRGDLPGAITELKNAMRLARSSGSAER
                     EADVQATLGAALALMGRSQQGLTMLNRAVAASRGDLADRVLMRRAAILKDLGRFHDAH
                     QDLSRELPNFRRAGDTVWEARSLIHRADIFIALGLPGRAGADFTRAEGLFAANGQEFE
                     HAKARHSLGLLALALGDLPEALAFFDEAEKRYDALGETLLDLPVDRCWALLAAGLPGE
                     AAQQANAILSRIPPGGGIAYKKAELLFTAATVALAAGNPADARDRARRAARLFRTQSR
                     PHW"
BASE COUNT          212 a          399 c          403 g          206 t
ORIGIN      
        1 tgacggaagt tacccggtca gcatcggagt cacggaccag cagatggcgt ttccggtgga
       61 gatagtgaac gttatccgga tcggctgtgt gcaccgcagc accttccagg ccttccagga
      121 cgtcgggaat gcccgacaag accaatctga gctgcgcgtc gagacggcta tccggctggc
      181 cgggaccctc gtcacgaatc gacattggtg acccctctcc cttttgactg gcatcgggaa
      241 ctgtctagca ttatcggagt gacgccggga gattctgata caggagaccg gctatccggc
      301 ccggctcggt tgctgccgct cgcgctatcc cggcccggag acgccgtgct cgccgcgcgc
      361 tggttgctgg acgggcagcc aagcgcgtat gaggcctcac tggctcacca cgcaatcggg
      421 atcgtcctgc gggatcgcgg cgacctccca ggagcgataa ccgaactgaa gaacgcgatg
      481 cgacttgccc gctcgtcggg cagtgctgag cgcgaagccg atgtgcaggc gactctggga
      541 gctgcgctcg cactaatggg ccgcagccag caaggactga cgatgctgaa ccgggccgtc
      601 gccgcatcgc gtggcgacct ggcggatcgc gtgctcatgc ggcgggctgc catcctcaag
      661 gacctgggcc gttttcacga tgcgcaccag gatttgagcc gggagctacc caacttccgc
      721 agggccggtg acacggtgtg ggaggcccgg tcgctgatcc atcgagctga catattcatc
      781 gccctcggcc ttcccggacg cgctggcgcg gatttcaccc gcgccgaggg actgttcgcc
      841 gctaacgggc aggaattcga gcacgccaag gcccggcaca gtcttgggct gctggcactg
      901 gccctgggtg atcttcctga ggcgcttgcc ttcttcgacg aagcggagaa acgttacgac
      961 gcactgggcg agaccctcct cgatctcccc gtcgaccgct gctgggcact gctggctgca
     1021 gggctgccag gagaggctgc gcagcaggcc aatgccattc tcagccggat acctcccggc
     1081 ggcgggatag cgtacaagaa ggctgaacta ctgttcacgg cggccaccgt cgccctggcc
     1141 gccggaaacc cagccgatgc ccgagaccgg gcgcggcggg ccgccaggct gttccggact
     1201 cagagcaggc cccactggga
//
LOCUS       DASRPQ010001982         1445 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3702176, whole genome shotgun sequence.
ACCESSION   DASRPQ010001982 DASRPQ010000000
VERSION     DASRPQ010001982.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3702176"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..251
                     /locus_tag="VFD73_22495"
     CDS             <1..251
                     /locus_tag="VFD73_22495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76745.1"
                     /translation="YRRRSPEGQIFKELDLTPAHPSMATYASRHLRDFLAIISGSAVR
                     YPDTMPTISGSLHVQHVVDTMLRATQGSLPIPDGQAEL"
     gene            248..1078
                     /locus_tag="VFD73_22500"
     CDS             248..1078
                     /locus_tag="VFD73_22500"
                     /inference="COORDINATES: protein motif:HMM:TIGR03971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mycofactocin-coupled SDR family oxidoreductase"
                     /protein_id="HZI76746.1"
                     /translation="MKAGRIAGRVALVTGAARGIGRACALRLAEEGADVAALDIGQAI
                     PTVPYKPSSTQQLEETASAVRALGRKCLTLVADVRDGAAMREAVAQAVDELGSVDILV
                     TAAGIDSWGHAWELTDDQWNAMLAVNLTGVWQSAKAVSPHMISKRSGAMVFIGSVLSH
                     RANRQFAHYTAAKHGVLGLVRSFALELAEYSVRVNSVDPTVVLTDMVTSQEYMDNLVG
                     HPGATEAEVRNHYLRWNVLPTPWIEPRDVANAALFLASDEARFITGLGLPLDAGAMLR
                     "
BASE COUNT          252 a          439 c          492 g          262 t
ORIGIN      
        1 tttaccggcg acgctcgccg gagggccaga tcttcaagga actcgacctg acaccggcac
       61 acccgagcat ggcaacctat gcgagccggc acctgcgcga cttcctcgcg atcatctccg
      121 gaagtgccgt ccgctaccca gatacgatgc cgacaattag cggttctctt catgttcagc
      181 acgtggtcga cacgatgctc cgagcgacgc agggcagtct gccgatacct gatggccaag
      241 ccgagctgtg aaggccggga ggatagccgg gcgggtcgct ttggtaactg gtgcggcccg
      301 cggcatcggc agggcttgcg cattgcgcct agccgaggaa ggcgccgatg ttgcggcgct
      361 ggatattggt caggcgatac ctacagtccc ctacaagcca agcagtaccc agcagctgga
      421 agagacggcg agcgcggtac gagcgcttgg ccgaaaatgt ctcacgctcg tggcagacgt
      481 cagggacggc gctgccatgc gcgaagcggt tgcccaggca gttgacgagc tggggtcggt
      541 cgacattctg gtgactgcgg cgggtatcga ctcctggggg cacgcctggg aactgactga
      601 tgaccagtgg aacgcgatgc tggcggtcaa cctcactggc gtctggcaga gtgcgaaggc
      661 agtcagcccg cacatgatca gtaagcgcag cggggcgatg gtcttcatcg gttcggtgct
      721 gagccacaga gccaaccgcc agttcgccca ctacaccgca gccaagcatg gtgtgcttgg
      781 gctggtccgc tcgtttgcgc tcgagctggc ggaatacagc gttcgcgtta attccgttga
      841 tcccaccgtg gttcttaccg acatggtgac cagccaggaa tacatggaca atctcgtcgg
      901 ccaccccggt gcgacggaag cggaagtacg caatcactac ctgcggtgga acgtacttcc
      961 gacaccctgg atcgagccgc gtgatgtcgc gaacgctgct ctatttctcg cctctgacga
     1021 agctcgtttc atcaccggcc ttgggctgcc actcgacgcc ggcgcgatgc tgcgatgagg
     1081 actaatccga cggagcggct tgggagccgt ggccgcccaa ccggggcggg atgctgagct
     1141 gtgtccactg ccgcgctggt ggctgctggg gccgcaggtc tttcctaccg ggtgatccgg
     1201 catgtaccgg tgcgcagtct ggctgaggcg gcgcgggcgc cccacgccgc atgagccggg
     1261 ggcccacaga tggcccacaa gtccgcattg cggcggcgcc cccacaggtt tcccatgtgg
     1321 ctggctccgg gccggagggt gatcttactg tcaggtgtgc gcctggccga cttgtggtgg
     1381 tgccgggcgg ttgcgatacc ggagcgcggt ggcagcgagg gggacttgat ggagctcaac
     1441 ggctg
//
LOCUS       DASRPQ010001983         2104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1503629, whole genome shotgun sequence.
ACCESSION   DASRPQ010001983 DASRPQ010000000
VERSION     DASRPQ010001983.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1503629"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..276)
                     /locus_tag="VFD73_22505"
     CDS             complement(<1..276)
                     /locus_tag="VFD73_22505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76747.1"
                     /translation="MDANAIITIATGVAGVAGGWFSGRRMGLSDSVQAAVSLSELQQA
                     RIDALEASLTVKNQEVAELRERVEMLESLVTQRAEVEAVHAEVVGVRQ"
     gene            complement(288..>2104)
                     /locus_tag="VFD73_22510"
     CDS             complement(288..>2104)
                     /locus_tag="VFD73_22510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76748.1"
                     /translation="GGIPFLSAADDQRPYMERMAEIRKQQFDNFAEPGEQSLEGWWLR
                     SQSTFTGGAGVLYQDPDNDNQFNYRFADSLGIDPWTSGNVQLLRRSAKSITSTNNNLM
                     TFGYVDPLGVDSAWVANGNNLSKLTDSGVTSIVTATAIASLTGTGSTYIFARTADGVW
                     SGVDTAAPTQRYTGALAAPQVAFVKDRLIITTSNAVHQGVLTAAAAALPAAIYTHQDP
                     NWRWRSITDGPAAIYIAGDSGTTSQIHKFAVVDEAGLPVLRWAGVTATMPAGETIRTI
                     YSYVGTFVGIATSKGFRVGEIDSNGDIVYGPLLFEPEFGCRGIVGNDRFMWVGSQGAH
                     DGDTGLFRVDLGNQIQEQTTRAVRYAYARDIYGEGEFSGGVNSVTMLGASDRKVFAVN
                     FGGFYKEQATELLPLGYLTTGRIRFNTEEPKLYKFFSVRTPASLNGDLSVAILSEGGG
                     EIPMITYSPLSTAGTKDVAISQPQGPQNWMRLKFIFERGSDTSFGAQLNGWQVKALPG
                     SIRQRIITVPVLLFNKEEDGGGNRIGYPGYARERFEAFKAVARAGDVILFQELTEGFT
                     TQVVIEDWEFQQDTAPFADGGALGGYLTVRMRTVAENT"
BASE COUNT          369 a          651 c          662 g          422 t
ORIGIN      
        1 ctgacggacg cccacaacct ctgcatgaac agcctcgacc tcggctcgct gggttaccag
       61 cgactcaagc atctcgactc gctctcgtag ttccgctact tcctggttct tgacggtgag
      121 gcttgcctca agcgcgtcga tacgcgcctg ctgtagctcg gacagtgaca cggccgcctg
      181 gacggagtcg ctgaggccca tccttcttcc gctgaaccag cctcctgcaa caccggctac
      241 gccagttgcg atagtgatga tcgcgttagc gtccatcgtc tcccctttta cgtgttctca
      301 gcgacggtgc gcatacgcac cgtcaggtat cctcccagcg cccccccgtc ggcgaatggt
      361 gcagtatcct gctggaactc ccagtcctcg atgaccacct gggtggtgaa tccctcggtg
      421 agttcctgga acaggatgac gtcgcccgct cgggcgacag ccttgaacgc ctcgaagcgc
      481 tcacgagcgt agcccgggta gccgatacgg ttaccgccac cgtcctcctc cttgttgaag
      541 agcaggactg gaacggtgat gatgcgctgc ctgatggatc ctggcagggc cttgacctgc
      601 catccgttga gctgcgcacc aaagctggtg tcggatccgc gctcgaagat gaacttgagg
      661 cgcatccagt tctgcggacc ctgaggctgg ctgatcgcca cgtccttggt tcccgcagtg
      721 gacagcggag agtacgtgat catgggaatc tcaccgccac cctcggagag gatggcgacc
      781 gagaggtcgc cattcagtga agctggcgtg cggacggaga agaacttgta gagcttgggc
      841 tcttcggtgt tgaagcggat gcgaccagtg gtcaggtacc cgaggggtag cagctcggtc
      901 gcctgctcct tgtagaagcc tccgaagttg accgcgaaga cctttcggtc cgatgctcca
      961 agcatcgtga ccgagttgac gccgccgctg aactcgccct caccatagat gtcgcgggcg
     1021 tacgcgtagc gtacagccct cgtagtctgc tcctggatct ggttacccag gtccaccctg
     1081 aacagtcctg tatcgccgtc gtgcgccccc tgggacccca cccacatgaa gcggtcgttg
     1141 cccacgatgc cacggcaccc gaactcgggc tcgaagagga gtgggccgta gacgatgtct
     1201 ccgttggagt cgatctctcc gaccctgaaa cccttgctcg tggcgatgcc gacgaacgtg
     1261 cccacgtagg agtagatcgt gcggatggtc tcaccggcgg gcatggtcgc agtgacacca
     1321 gcccagcgca ggacgggaag tcctgcctca tcgactactg cgaacttgtg gatctggctc
     1381 gtggtgccac tgtcgcccgc aatgtagatg gctgcgggcc catcggtgat ggacctccag
     1441 cgccagttag gatcctggtg ggtgtagatg gctgccggta gggcagccgc tgcggcagtc
     1501 aggacaccct ggtgtaccgc gttggaagtg gtgatgatca ggcggtcctt gacgaacgcc
     1561 acctgcggag ccgcaagggc tccggtgtag cgctgcgtag gtgcggccgt gtccactccg
     1621 ctccacactc cgtcggcagt gcgggcgaag atgtaggtgc tgccggtgcc ggtcaggctg
     1681 gcaatggcgg tagccgtcac gatggacgtg acgcccgagt cggtcagctt ggacaggttg
     1741 ttgccgttgg caacccatgc cgagtcgacc cctagtgggt cgacgtagcc gaacgtcatc
     1801 aggttgttgt tggtcgaggt gatcgacttg gcgctacgac gcagtagctg cacgttgccc
     1861 gaagtccacg ggtcgatgcc cagagagtcg gcgaagcggt agttgaactg gttgtcgttg
     1921 tcggggtcct ggtacagaac gccagctcca cctgtgaagg tggactggct cctgagccac
     1981 cagccctcaa gtgactgctc gccaggctcg gcgaagttgt cgaactgctg cttcctgatt
     2041 tccgccatgc gctccatgta cggccgctgg tcatcagcgg ccgacaggaa cggaatgcca
     2101 ccca
//
LOCUS       DASRPQ010001984         1070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2417702, whole genome shotgun sequence.
ACCESSION   DASRPQ010001984 DASRPQ010000000
VERSION     DASRPQ010001984.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2417702"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          194 a          324 c          336 g          216 t
ORIGIN      
        1 cagcgtgaag gaacccagcg caggctccaa cttctgcgcg acgagccact cggcatagcg
       61 ggcgatgacg cccgtgtacc agtcgacagc ctgtgccgac ttaccgctcg ccgccttctc
      121 tgtggccaac agctcgctca ggtgggccag gctgatatcc tctttacgca tacgctccca
      181 cctcgtcttg cccggtcggt caagagtggc agaccgactc ggtcggactc ggtctgccgg
      241 cttgcggacg ttgctcgcgg ctcgggtgct agtgacgtgc tgcctggtct cggtatgcat
      301 ctcgccggaa gctgccactg gatgtcgtga agctcggatg ctgggaatgc gagtgctggc
      361 catgatagtc tcctcgtgcc tggatcggct gcaagatgct gtggtgcagc cgtgggggac
      421 gtgcggccag ggtgttgtcc gggtgtggtg gcagcgtggg gtccctgtgg gggtgcctaa
      481 ataaccaaat cagttcaggc actccatgtg ggaccgcgct cccatgtcga gacaacaaca
      541 aagccgctct agaagcggct ttgaagcatc cgaactgaat tactgtaggg ggcgggcttc
      601 ccaagcaata gggcgcgggt tcgaatcccg tctcccgctc catagtttca agaaaccggg
      661 ccacatctgg cccggtttct ttgtgccctc gctacgcagg cgagtgacac cgtctcccga
      721 ctgcatgatg agaatcaagg cgacggcgag cgaattgggt gcaattgcgg gaaatgagtg
      781 cgcaagtcag agaaatgtga cgaaattcga cacaaatgtc cccaacgagg acagcggctg
      841 agtcttcccg tgctcgccca catgcagtag tcaccgacgc ttgtgcgcta gcggccagct
      901 cccatcgtgg tgccagcgtc ttacagtcgc tctcactcgg ttgccaacgg gcctgctgag
      961 ctgaacgtgg tcgtgcgcca catcttcggc tccgagccgc acgatgcgga gatcgcgcgc
     1021 ttcatgaacg ggccgatgtt caccttgctc gccgaggccg cagcggcctc
//
LOCUS       DASRPQ010001985         1227 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3046731, whole genome shotgun sequence.
ACCESSION   DASRPQ010001985 DASRPQ010000000
VERSION     DASRPQ010001985.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3046731"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..235)
                     /locus_tag="VFD73_22515"
     CDS             complement(<1..235)
                     /locus_tag="VFD73_22515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HZI76749.1"
                     /translation="MTRLSRTNCEEAFRLLDDFLDRRLTPEETKIIEEHLEICAWCAR
                     EFNFETSVLHGLKRKLRQLDAPSGLLSRILSQLP"
     gene            complement(232..870)
                     /locus_tag="VFD73_22520"
     CDS             complement(232..870)
                     /locus_tag="VFD73_22520"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZI76750.1"
                     /translation="MIQPSSVPSGLAGMDRPVAAEPATFESLFAAVMGSAYGVAMRFC
                     HNQADAEDLVQEAAFLAYRAFGSFEQGSNFRAWFLKILTNCYFSKRRREKSRPVTSDL
                     DDTPDLYLYAHSGQAGFPTQGPDPASQLLETLGTERIVAAIGRLPEDYRVVCTLYFME
                     DLSYEEIARILECPVGTVRSRLHRGRKMLQKALWQVAEEDGIVGDKPKETDA"
     gene            1004..>1227
                     /locus_tag="VFD73_22525"
     CDS             1004..>1227
                     /locus_tag="VFD73_22525"
                     /inference="COORDINATES: protein motif:HMM:NF013003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HZI76751.1"
                     /translation="MIVIRHKESGATLLEYPGDSLAGATLDHAVLLGADLRSSDLRGA
                     YLRGVDLCQADLRGAVLDGADLREADVTLAT"
BASE COUNT          215 a          390 c          399 g          223 t
ORIGIN      
        1 caggaagctg ggacagaatc cgggagagca gcccggaagg cgcgtcgagc tgccgcagct
       61 tccgcttcag tccgtgcagc acgctggtct cgaaattgaa ctcgcgggcg caccaggcgc
      121 agatctccag gtgctcctcg ataattttcg tttcctccgg ggtgagccgg cgatcgagga
      181 agtcatcgag caggcggaac gcctcctcgc agttggttcg gctcagccgg gtcacgcgtc
      241 ggtctccttg ggtttgtcgc ctacgatccc gtcttcttcg gcaacctgcc agagcgcctt
      301 ctgcagcatc ttccgcccgc ggtgcaggcg ggaacgcacg gtgccgaccg ggcactccag
      361 aatccgcgcg atctcttcgt agctcaggtc ctccatgaaa tacagcgtgc acaccacccg
      421 gtaatcctcc gggaggcggc caatcgcggc aacgatcctt tcggttccca gggtttccag
      481 cagttgcgac gcgggatcgg ggccctgggt gggaaagccg gcctggcccg agtgggcgta
      541 gagataaaga tccggcgtgt cgtccaggtc tgaagtcacc ggccgactct tttctcgccg
      601 tcgcttcgag aagtagcagt tggtcaggat cttgaggaac caggcccgga agttcgagcc
      661 ttgctcgaac gacccgaacg cccggtaggc aaggaaggct gcttcctgca ccagatcttc
      721 ggcatcggcc tgattgtggc agaagcgcat cgcgacgcca tacgccgagc ccatgaccgc
      781 ggcgaacagc gactcgaacg tcgccggctc agcggctacg gggcgatcca ttccggcgag
      841 accggacggc acggaggacg gctggatcac gaagatgctc gactcgcgaa atcgccatgg
      901 gttgagatgg atagctgtat cctgcgtccg atcggctcat cctgcaaggt gacttcgcgt
      961 cccctggcgc accgggagcg gatcccccaa tatcgcttcc tgtatgatcg tgatccgcca
     1021 caaggagagt ggggcgaccc tgctcgaata cccgggcgat tcgctggccg gggcaacgct
     1081 ggatcacgcg gtgttgctgg gcgccgatct ccggagcagc gacttgcgcg gagcctacct
     1141 ccgtggcgtc gatctctgtc aggcggatct ccgaggcgcg gtgctggacg gcgccgacct
     1201 tcgcgaggcg gatgtcaccc tggccac
//
LOCUS       DASRPQ010001986         1493 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_540105, whole genome shotgun sequence.
ACCESSION   DASRPQ010001986 DASRPQ010000000
VERSION     DASRPQ010001986.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1493)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1493)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1493
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_540105"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            954..>1493
                     /locus_tag="VFD73_22530"
     CDS             954..>1493
                     /locus_tag="VFD73_22530"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HZI76752.1"
                     /translation="MLYLENHSFDSLLGYWCDETRAGARTGMPSKVTLSDGTVVTPTV
                     TPDLVPAVSHSVASQQAAIDGGKMDGWQKVQGCQPTKKYACISGYTPSQVPNLTALAD
                     HFAISDRTFSMDDSPSWGGHARREGRPVQRALPLLHHLRGRLARPGGLRDHDRPGLAV
                     HRAVHHLGPLRLLLRPGAAR"
BASE COUNT          259 a          472 c          478 g          284 t
ORIGIN      
        1 tagtagttct gcccggcacg ggagcacgtc tgcggtgacg gcgcgccgtg ctggcagctg
       61 ccagcacagt cggctaggtg cgccctccct tccttacatc tgatcgggcc gcagcttact
      121 gcggcgaaga ccctgcatgc aggacattct gagatatgtc cgtggtgccg gctttgctga
      181 ggccagaaag tattgttacc gatgtatctg agcccatcac ggaaccgcat caatgccgcg
      241 atcatcaacc aagcgcggca atccggccac caagggtaaa cgtcgggagg gggtaaacgc
      301 ccagaacggt tagtgatgcg ttagtgatgg gttaagagtg ggttagcggg cgcccggatt
      361 gcccaggtta agggcggtta ccggtgctca ggctggtgtc ggcggtccag cgcgagatgc
      421 ggttcatgga ccggccgtgc cgatggcccc gggttgcgtt tccccgcgcc aacaagatgc
      481 gtgcccgggc cgggatgtgg tgccggatgg cggccctgag ccggctgccg ccgccaaggt
      541 ttgatcccat atgtcacctc tgtcccgcct gaggcaagag atacagaaat gttcatgtga
      601 cgcgcaggtg cttcccaggc acctccatgt caaaattcat cgagtttggg cacgtttgac
      661 ctcggcaatg gggagaagag gttttcttta ttctcgactg aaaaagtatg cttcgatccg
      721 ctcaggcgac cgtctcgaag tgatcctgtc cacggtcacg gtcaggcgcg tgagctgcgg
      781 tacgccaggc atgccgccaa cgacaggagg ccctactagt ggcagctcac ggcagatggt
      841 tttcggcccg ggcacgggtg atcgcgcttt tgaccgtggc cgtggccggg ctcttcggcc
      901 tcgccatggc cagttcggcg agtgcccagc cgtcaccggt ctagcacgtg gtcgtgctct
      961 accttgaaaa tcactccttc gatagcctgc tcggctactg gtgcgatgaa acccgggccg
     1021 gtgcccggac ggggatgcct tctaaggtca cactgtctga cggcaccgtg gtcaccccga
     1081 ccgtgacccc ggacctcgtg ccggcggtat cgcactccgt ggcgtcgcag caggctgcca
     1141 tcgacggcgg caagatggac ggctggcaga aggtgcaggg ctgccagccc accaagaagt
     1201 acgcctgcat cagcggttac acgccctccc aggtgcccaa cctgaccgcg ctcgcggacc
     1261 acttcgccat cagcgaccgc accttctcca tggacgacag cccgtcgtgg ggcggtcacg
     1321 cccggaggga aggacgccca gttcagcgag cactaccgct tctccatcac ctccggggtc
     1381 gactggctcg gccaggaggc ctccgcgatc atgaccggcc cggtctggcg gtccaccgtg
     1441 ctgttcatca cctgggacct ctgcggctgc ttctacgacc aggtgcggcc cgg
//
LOCUS       DASRPQ010001987         1338 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3399925, whole genome shotgun sequence.
ACCESSION   DASRPQ010001987 DASRPQ010000000
VERSION     DASRPQ010001987.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1338
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3399925"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..706)
                     /locus_tag="VFD73_22535"
     CDS             complement(<1..706)
                     /locus_tag="VFD73_22535"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HZI76753.1"
                     /translation="MSETLMKAACLNAHEGLEHLVYQEVPRPQPGTGEVLVQVQATAI
                     TPTEVSWSPTWKTATGTDRPFPIILGHEFSGIVTALGPGVARSADTPDAITEGMAVYG
                     MNDWDRQGADAEYCLARPDQLAPKPRSLDDVQAAEVPISGLTAWQALFEHAQLAAGQR
                     VLIHGATGGVGSFAVQLAHGTGAHTIGTASTRHAALARELGADEVVDYTTQRFDEIVH
                     DVDVVLDTVGGETLERS"
BASE COUNT          256 a          399 c          432 g          251 t
ORIGIN      
        1 aggagcgctc cagcgtctcg cctcccacag tgtcgagcac cacatcgacg tcatggacga
       61 tctcgtcgaa gcgctgcgtg gtgtagtcca ccacctcatc ggcgccgagc tcgcgcgcaa
      121 gagcagcatg gcgcgtcgag gcagtcccga tggtatgcgc ccccgtcccg tgcgccagtt
      181 ggacggcaaa actcccaacg ccgccggtgg cgccatgaat caggacccgt tgcccggcgg
      241 ccagctgggc atgctcgaag agcgcctgcc atgcggtgag gccagagatg gggacctctg
      301 ccgcctgcac atcatcgagg gagcgcggct tgggcgcgag ctggtctggt cgggcgaggc
      361 agtattcggc gtctgcaccc tgccgatccc aatcgttcat cccatagacc gccatgccct
      421 cggtgatcgc gtcaggagtg tccgctgagc gggcgacgcc ggggccgagt gcagtgacga
      481 tcccggagaa ttcatgccca agaataatgg gaaacgggcg gtcggtgcct gttgcggtct
      541 tccaggtcgg tgaccagctg acctcggtgg gcgtaatcgc ggtcgcctgg acctgcacca
      601 gaacctcgcc cgttccgggc tgcgggcgtg ggacctcttg atagaccagg tgctcaagcc
      661 cttcatgcgc attgaggcag gcagctttca tcaacgtctc gctcacggta cttctccttg
      721 aatgatgatg agtatgtgca aagtgcacgg acatctcgcc ctgttgagcg cggttgacac
      781 acgtatcgat ggcgccaaag atccccgcga gatccccgcg agatccccga cggaacacca
      841 tgcgaggagg ctagcagggc accatgcgac ctgctacggc gccatgcacg cgtccgcagt
      901 cacgtagtgg tgcatgccgc agatggaatg ccatgatccc aacgcgaacc gttcgccctc
      961 cacacgccgg gtgacagata gagaacccat gtggatggcg tcaagcggat atgagatgga
     1021 gacgtgtgca ggacaaattg agcactggcc aatccacatg gcgtgttgtc tggagggcgc
     1081 tggcgagttt gtacggcggt ttgccgggga aaactcatca gacacactgt tcatctctgt
     1141 ctggagctgg aaatctgagc agtagaagat tgctcccgtt cgctgcatca cgacgacatc
     1201 gatggggcgc tacggttggt acaggatccg cgctgagatt cgcttccagg tctgcctgaa
     1261 ttgggacggc agaacctaga gcgtgtgagg gacttgcggt cgcgggggtg gtagcatgcg
     1321 ggtatgtcta cccttcct
//
LOCUS       DASRPQ010001988         1301 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3047530, whole genome shotgun sequence.
ACCESSION   DASRPQ010001988 DASRPQ010000000
VERSION     DASRPQ010001988.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1301
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3047530"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(100..519)
                     /locus_tag="VFD73_22540"
     CDS             complement(100..519)
                     /locus_tag="VFD73_22540"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HZI76754.1"
                     /translation="MPRAQLAALPFTLKEGRSQVLLVTSRETRRWVIPKGWPKKKVEP
                     QVQAAREAYEEAGIVGSVDTRPIGSYRYEKRLKSGKTTTCKVNVYLLEVEQELDEWPE
                     KGERERRWMSPAEAADLVTEDSLTDILLRLANGLPLS"
     gene            complement(480..788)
                     /locus_tag="VFD73_22545"
     CDS             complement(480..788)
                     /locus_tag="VFD73_22545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76755.1"
                     /translation="MIKFVEPEGAAREAIAAAVVLTAPLTLTLAFLLARPALKQAFRL
                     YLTMADIAAEVRAERSPNIRAGRSATGLSGQARPGLAPIRKGAMRECLVLNSPRCPSL
                     "
     gene            969..>1301
                     /locus_tag="VFD73_22550"
     CDS             969..>1301
                     /locus_tag="VFD73_22550"
                     /inference="COORDINATES: protein motif:HMM:NF037997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005436 - sodium:phosphate symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015114 - phosphate ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0035435 - phosphate ion transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0044341 - sodium-dependent phosphate
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi symporter"
                     /protein_id="HZI76756.1"
                     /translation="MDGTLTLINLAGSIALLLWGVHMVQSGIQRAFGPNLRRMLGTAL
                     SSRLKAFFAGIGVTAVLQSSTATGLMVASFAASGLVDLVPALAVMLGANVGTTLIVQL
                     LSFDVAQVA"
BASE COUNT          226 a          430 c          387 g          258 t
ORIGIN      
        1 ctcaagctcc ccatgccgat cgtcgaggac gtatttggtc tcattctcga tcggcatgat
       61 gccatcccag aggccaacgt cgtccttgct gtctccggcc tatgaaagag gcaggccgtt
      121 cgccaatctc agcaggatgt cggtgaggct gtcctcggta acgaggtcgg cggcctcggc
      181 gggagacatc cagcgccgct cccgctcacc cttctccggc cattcatcga gttcctgttc
      241 aacctccaac aggtagacgt tgaccttgca ggtggtcgtc ttcccggatt tgaggcgttt
      301 ctcgtaccga taggagccaa taggtcgggt atccacactg ccgacgatcc ccgcttcctc
      361 gtatgcctca cgcgccgcct ggacctgggg ctccaccttc tttttcggcc agcccttggg
      421 aatgacccat cgccgggtct cccgcgacgt caccagcagg acctgggacc ggccttcctt
      481 caaagtgaag ggcagcgcgg cgagttgagc acgaggcatt cgcgcatagc ccccttcctg
      541 ataggagcca agccgggcct ggcttgacca gacaacccgg ttgcagagcg accggcgcgg
      601 atgttcggtg atcgttcggc ccgcacctcc gccgcgatgt cggccattgt cagatagaga
      661 cggaacgcct gcttgagcgc aggccgggcc aggaggaatg ccagcgtgag ggtcaacgga
      721 gcggtcaaca cgactgcggc ggcaatagcc tctcgtgccg ctccttcagg ctctacgaac
      781 ttgatcatgg gacatcccgg ccgacctgtc gatttatcaa gagctacacg cctcagtcga
      841 tcagagcaag cggcaggggc cacgatgatt cctggcgttc ttgacggaac ttccgttcca
      901 gaatcccaat accctgtcgt tccaattgtc aggaccacct ccaccgaacc ccgcgcaagg
      961 agatttgaat ggatggaacg ctgactctga tcaacctggc cggctccatc gctctgctgc
     1021 tgtggggcgt ccacatggtc cagagcggca tccagcgcgc cttcggcccg aacctgcggc
     1081 gcatgctggg gacggcgctc agcagccgcc tgaaggcttt cttcgcaggg atcggcgtaa
     1141 ccgcggtgct gcagagcagt acagccacgg ggctcatggt ggcctccttc gccgccagcg
     1201 gcttggtcga tctcgtcccg gccctggcgg tcatgctggg cgcgaacgtc ggcaccacgc
     1261 tgattgtcca gctgctgtcc ttcgatgtgg cccaggtcgc c
//
LOCUS       DASRPQ010001989         4555 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1165541, whole genome shotgun sequence.
ACCESSION   DASRPQ010001989 DASRPQ010000000
VERSION     DASRPQ010001989.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4555
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1165541"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..438)
                     /gene="pssA"
                     /locus_tag="VFD73_22555"
     CDS             complement(<1..438)
                     /gene="pssA"
                     /locus_tag="VFD73_22555"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HZI76757.1"
                     /translation="MELTQRRQGLRRPSIRHVVVVMPSAFTLGNLFFGFWSIVSAFNG
                     NFRWAGWFIVFAGILDMLDGRVARLSGTGTRFGAELDSLVDVISFGVAPALLMYFLDF
                     ASAGRFAWVLCYIYVVAVALRLARFNVISSGKPSTGWFTGMPSP"
     gene            complement(429..1079)
                     /locus_tag="VFD73_22560"
     CDS             complement(429..1079)
                     /locus_tag="VFD73_22560"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: protein motif:HMM:NF003678.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase family protein"
                     /protein_id="HZI76758.1"
                     /translation="MIRTAPEGRWFIVAAWAVALALWLGVFRFHSSGWWIGAVIATLL
                     AIWVVAFFRDPERGGQRGARLILAPADGTVVSIVETDEPTFLEARAVRISIFMNVFNC
                     HVNRYPSDGVIGYRHYNRGKFGHAGAEKSSLDNEQSSVGLLTEKGKVLIRQIAGLIAR
                     RIVTDHEVGTVVHQGERMGMIRFGSRVDLFLPIGTRVLVHVGENTRVGETVVAEWS"
     gene            complement(1076..2008)
                     /locus_tag="VFD73_22565"
     CDS             complement(1076..2008)
                     /locus_tag="VFD73_22565"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HZI76759.1"
                     /translation="MKPPAATLVQSRLPLPLVRRGKVREVYEVDANHLLIVASDRVSA
                     FDVVMREPVPRKGAVLTQISAFWFEQLADVFPSHYLTARTAEILDRVRGLAGMERELA
                     GRAMLVRRAPPVPFECVVRGYLSGSAWAEYRDRGTLAGEPLPSGLVESQRLETPLFSP
                     ATKAESGHDLNVTFADVAAALGQKLAVRLRDASFAIYAAGRDYAAKRGIIIADTKFEF
                     GIDDAGNLMLIDELLTPDSSRFWPAEQYSAGRGQPSFDKQPLRDYLASLKAASQWNGE
                     APPPALPDQVVEATSRRYLEAYRLLTGSELSESP"
     gene            complement(2005..3444)
                     /gene="purB"
                     /locus_tag="VFD73_22570"
     CDS             complement(2005..3444)
                     /gene="purB"
                     /locus_tag="VFD73_22570"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HZI76760.1"
                     /translation="MSDDRWRSPLGTRYASPAMQTLWGEPRRIALWRRLWLALAEAER
                     ELGLDIPEQAIAQMRAHLDDADLSVAARYERRFRHDVMAHIHAFADQAPAARAYLHLG
                     ATSAFVTDNADLILMREGLRLLLGRLIAVIGGFERVATRYADLPCLAYTHFQPAQLTT
                     VGKRACLWLQDFGLDVEEVCHRIETLRLRGCKGTTGTQASFLELFGGDHEKVKQLDRR
                     VAAQLGFSKTFPVTGQTYSRKTDSVMLDTLSGIAQSAAKMAGDLRLLQHEGELFEPFE
                     SEQVGSSAMAYKRNPMRAERISGLARWVIALPANTAQTAATQWLERTLDDSANRRLVL
                     PEGFLATDAILVLATNIAAGLEVREEAIRRHVDEQMPFMATERWLMLGVASGGDRQAL
                     HEVIRRHSLAVAEEVSRGGANDLLSRLAKDPAFRGVPAGRLQSELDPSKYTGRAAQQV
                     TEFLTEYLHPLLDRARPLAAEPEAPEVVV"
     gene            complement(3441..>4555)
                     /locus_tag="VFD73_22575"
     CDS             complement(3441..>4555)
                     /locus_tag="VFD73_22575"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HZI76761.1"
                     /translation="FVLRPNGIIVTNQHVVANAEKVVVTLPDGSDLPATVLGEDPLTD
                     IAVLRIHRDNLPTVVLGHSTDLMIGEWVVALGNPYAYLLGNAEPTVTVGVVSATGRNI
                     LPGGDQTGLYLDMIQTDAAINPGNSGGPLTNALGEVVGVNSSIFSSSGGSVGLGFAIP
                     IERAARVADEIIRNGTVRRAWVGLEVEGASAMREWKSEGGVVLNSVAPGGPAARAGLR
                     PSDVLVEANGRRLRNYLDWEAVKLDLHVGDTVDILVRSGSSRVHRRIITGDLPTVAAQ
                     KITVLQDLQLINVTPAIQAERGIRSERGALIFKISPQVSRATGLQEGDVILGINRSPV
                     RNASEVADLLNVRPGQVIRIYVERAGQVTFTDLVFR"
BASE COUNT          851 a         1522 c         1409 g          773 t
ORIGIN      
        1 gggcgacggc atgccggtaa accagccggt cgacggtttt ccggaggaga tcacgttgaa
       61 ccgcgccagc cggagcgcga ccgccaccac gtagatgtaa cacagcaccc aggcaaagcg
      121 gccggcactg gcaaaatcca ggaagtacat cagcagggca ggggcgacgc cgaaggagat
      181 gacatccacc agggaatcca gctcagcgcc gaaccgagtc ccggtgcccg acagacgggc
      241 cactcgcccg tcgagcatgt cgaggatgcc ggcaaagacg atgaaccagc cggcccaccg
      301 gaagtttccg ttgaacgccg agacgatgga ccagaatcca aagaacaaat tgccgagggt
      361 gaaagcgctg ggcatgacca ccaccacgtg acggatggaa ggccgcctca gtccctgacg
      421 ccgctgtgtc agctccattc ggctaccacc gtttctccta cccgggtgtt ttctcccaca
      481 tgcaccagca cccgagttcc gatgggaagg aagagatcga ctcgggaccc gaagcggatc
      541 atgcccatcc gctccccctg atgcaccaca gttccgacct cgtgatcggt cacgattctc
      601 cgagcgatga ggccggcgat ctggcgaatg agcaccttgc ccttctcggt cagaagacca
      661 accgaagact gctcgttatc cagactggat ttttcagcgc ccgcatggcc gaacttcccc
      721 cgattgtagt ggcggtagcc aatgacgcca tcgctgggat accggttcac gtggcagttg
      781 aacacgttca taaagatcga gattcggacc gctctcgcct caaggaatgt cggctcgtcg
      841 gtttcgacga tgctgacgac ggtgccgtcg gccggcgcca ggatcagccg ggccccccgc
      901 tggcctcccc gctctggatc acgaaagaat gcgaccaccc agatagcgag cagggtggca
      961 atcaccgctc cgatccacca ccccgaggag tggaaccgga agacgccgag ccagagtgcc
     1021 agtgccaccg cccaggcggc gacgatgaac cagcggcctt ccggtgccgt acgaatcacg
     1081 ggctctcgct cagctcggac ccggtcagca gacgatacgc ctccaagtat cggcggctgg
     1141 tcgcctcaac tacttggtca gggagcgcgg gcggcggcgc ctcgccgttc cattggctcg
     1201 ccgccttgag cgacgccaga tagtcacgca gcggctgctt gtcgaagctg ggctggcccc
     1261 ggcccgcgct gtactgctcg gccggccaga accgggaaga gtcgggcgtc agcagctcat
     1321 cgatgagcat cagattgcct gcatcgtcga tgccgaattc gaacttggta tctgcgataa
     1381 tgatcccccg tttggcggca tagtcccgcc cggcggcgta aatcgcgaag ctcgcgtcgc
     1441 gcaagcggac cgccagcttc tgcccgagag cggcggcaac atccgcgaac gtcacattga
     1501 ggtcgtgccc cgactccgcc tttgtggccg gcgaaaacaa cggtgtttcg agccgctggc
     1561 tctcgaccag accactcggc aacggctcgc cggccagggt gccgcgatcg cggtattccg
     1621 cccaggctga tccggagaga taaccccgca ccacgcactc gaacggcact gggggagccc
     1681 gtcgaaccag cattgcgcgg ccggcgagct cccgctccat ccccgcgagg ccccgcactc
     1741 ggtccagaat ttctgcggtc cgagcggtga ggtaatgcga ggggaagacg tcggccagtt
     1801 gctcgaacca gaacgcgctg atctgggtca gcacggcgcc tttccgcggc accggttccc
     1861 gcatcaccac gtcgaacgca ctgactcggt cgctggccac gatcagcaga tggttcgcgt
     1921 ctacctcgta gacctcgcgc acctttcccc gacgaacgag cgggagcggc aagcggctct
     1981 ggaccagagt ggcggccggc ggcttcatac cacaacctcc ggagcttcag gctccgcggc
     2041 aagcgggcga gcccggtcca gcagcggatg gaggtactcg gtcagaaact cggtgacttg
     2101 ctgcgcagcc cggccggtat acttggacgg atccagctca gactgaagcc ttcccgcggg
     2161 cactccgcga aaggcgggat cttttgccag gcggctcagc agatcgttgg cgccgcctcg
     2221 gctcacttct tccgccacgg cgaggctgtg tcgacggatg acttcatgca gcgcctgccg
     2281 gtcgccgccg gaagctactc cgagcatcag ccagcgctct gttgccatga aaggcatctg
     2341 ttcgtccaca tgccggcgaa tggcttcttc ccgcacttcc aggccggccg cgatgttcgt
     2401 tgcgagcacc agaatggcat cggtggcgag gaagccttcc gggagcacga gccgccggtt
     2461 ggcgctgtcg tccagggtcc gctccagcca ctgagtggca gcggtctgcg cggtgtttgc
     2521 cgggagcgcg atgacccagc gggcaagccc gctgattcgc tcggcacgca tcgggtttcg
     2581 cttgtaggcc atcgcgctgg aacccacctg ctccgactcg aagggttcga acaactctcc
     2641 ctcgtgctgc agcaaccgaa ggtctccggc catcttggca gcggactggg cgatcccgct
     2701 gagcgtatcg agcatcacac tgtcggtctt ccggctgtag gtctgtccag tgaccgggaa
     2761 ggtcttactg aagcccagtt gcgcggcaac ccgccggtcc aactgcttga ccttctcgtg
     2821 gtctcctccg aacaactcca ggaaagacgc ctgagtcccg gtggtcccct tgcatccccg
     2881 aagccgaagc gtctcgatcc ggtggcagac ctcctcgaca tccaacccaa aatcctggag
     2941 ccacaggcag gctcgcttgc ctaccgtggt cagttgggcc ggttgaaagt gggtgtatgc
     3001 gaggcacggc agatcggcat accgggttgc aactcgctcg aagcctccga tgaccgcgat
     3061 caatcggccg agcaacaggc ggagcccctc gcgcatgagg atcagatccg cgttatcggt
     3121 cacgaacgcg ctcgtcgctc ccagatgcag gtacgctcgc gccgcgggcg cctgatcggc
     3181 aaaggcatgg atgtgggcca tgacgtcatg ccggaagcgc cgctcgtaac gcgccgcgac
     3241 cgagaggtcg gcgtcgtcga gatgagcccg catctgggcg atggcctgct ccggaatgtc
     3301 cagacccaat tcccgctcgg cctcggcgag cgccagccag agccgccgcc agagcgcgat
     3361 ccgccgcggc tcgccccaga gtgtctgcat cgcgggcgag gcgtaccggg ttccgagcgg
     3421 cgagcgccag cggtcgtcgc tcaccggaac accaggtcgg taaaggtcac ctgtccagcg
     3481 cgctccacgt agatccggat cacctgaccc gggcggacgt tcagcaggtc ggcgacttcc
     3541 gaggcgttgc gtaccggcga ccggttgatc ccgagaatga catctccctc ctgcagcccg
     3601 gtggctctgc tcacctgggg cgagatcttg aagatcagcg ctcctcgctc acttcggatc
     3661 ccacgttccg cctgaatcgc aggggtgacg ttgatcagct gcaggtcctg cagaacggta
     3721 attttttgtg ccgcgacggt gggaaggtct ccggtgatga tccggcgatg gaccctcgag
     3781 ctcccgctcc ggaccaggat atcgacggtg tctccgacat ggaggtcgag cttgacggct
     3841 tcccagtcca ggtagttgcg caatcggcga ccgttcgctt ccaccagcac gtcactcggt
     3901 ctcaggccgg cgcgagcagc gggtccaccc ggggcaacgg agttgaggac cactccgccc
     3961 tcactcttcc actctcgcat tgcgctggcg ccctcgacct cgagcccgac ccaggctcgc
     4021 cggaccgtgc cattccgaat gatctcatcg gctacgcgcg ccgcccgttc aatggggatg
     4081 gcaaacccca gcccgaccga cccgccgctg ctgctgaaga tcgaggaatt caccccgaca
     4141 acctcaccca acgcattggt aagaggacca ccggagtttc ccgggttgat ggcagcgtcg
     4201 gtctggatca tgtcgaggta gaggccggtc tgatctccac ctgggagaat gttgcgtccc
     4261 gtggcgctca ccacgccgac ggtaacggta ggctccgcat tccccagcag ataagcatag
     4321 ggatttccca acgccaccac ccattcgccg atcatcaggt cggtactgtg gccgagcacc
     4381 accgtgggaa gattgtcgcg gtggatccga aggacggcga tgtcggtgag cgggtcctcc
     4441 cctaaaacgg tcgcgggtaa gtcactgccg tcggggagag tcaccacgac cttctcagca
     4501 ttggctacga cgtgctgatt ggtaacgatg atcccgttgg gccggagaac gaacc
//
LOCUS       DASRPQ010001990         1077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2774725, whole genome shotgun sequence.
ACCESSION   DASRPQ010001990 DASRPQ010000000
VERSION     DASRPQ010001990.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2774725"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            47..478
                     /locus_tag="VFD73_22580"
     CDS             47..478
                     /locus_tag="VFD73_22580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76762.1"
                     /translation="MSKATIRKLFVASLVAIAGGLVLLGGAGALAYANATVVKNGPDV
                     VAVHATPFGWVMIGLAAVAILVLIAAAITQFIAWLAAVIHTAELADKTWFVVLLLTGL
                     LSFGFIAMAVYLIAGPDDPTPVTARPITAKAASRDLHSRSA"
BASE COUNT          200 a          330 c          361 g          186 t
ORIGIN      
        1 ggcgccggtc tgagcacgca acaccaacta cctggaagtg gtcactatgt ctaaggcaac
       61 gatcagaaag ctgttcgtgg ccagcctggt cgccatcgct ggcggcctgg tcctgctggg
      121 cggggcgggc gcgctggctt acgccaacgc aaccgtggtg aagaacggcc ctgacgtggt
      181 agcggtgcac gccaccccgt tcggctgggt catgatcggg ctggccgcag tcgccatcct
      241 ggttctgatc gccgccgcga tcacccagtt catcgcctgg ctcgctgcgg taatccacac
      301 ggccgagctt gccgacaaga cctggttcgt cgtgttgctc ctcactgggc tgctcagttt
      361 cgggttcatc gcgatggcgg tatacctgat tgccgggcca gacgatccca cgccagtgac
      421 tgccaggcca atcacagcca aggcggccag ccgggacctg cacagccgga gcgcataaca
      481 gccgaacgtg tgggtatccc atcccctgca agcgaaggat gggatacccg ggcgaggggt
      541 cagacgtggg gactcgcagt cgctctcgga tacctacgca cctccagtga catacaggag
      601 cgctgcagcg tccatgctgg acactccaca gcacgctgac gtgcggatac ggcttcccgc
      661 gcaccgaccg gacactttcc attgatctac ggatcaagtg gctcaggtta gcggcgtgcg
      721 ctacggaatc ttcgatgcca aaggacagac gcatccaaga accggtacat cggggctgtg
      781 agcctggggt tcagtccgtc cggggcgcgg atccggaaga aggtcaccgg gcagactaag
      841 actaggtccg ggacaagcta cgggagctgc ataagcaggt cgaaggcggg ctgcggccgc
      901 ggcggcgcta caccgtggaa gacgcgctcg aggactggct ggccgttggc ctggatggcc
      961 tttcggcgcg gacggttacg ttgtaccggg gcacgatcgc taaggcgctg cgtgaggagc
     1021 tcggtagcat ccggctgacc gatctgactg cggcggatgt ccagaaggcg ctgacgt
//
LOCUS       DASRPQ010001991         1087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1825550, whole genome shotgun sequence.
ACCESSION   DASRPQ010001991 DASRPQ010000000
VERSION     DASRPQ010001991.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1825550"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1087)
                     /locus_tag="VFD73_22585"
     CDS             complement(<1..>1087)
                     /locus_tag="VFD73_22585"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HZI76763.1"
                     /translation="EGDRRRARSAYFPQLNGSASYQRTLRSQFSALNAGTDTSTSTGQ
                     ICNRFIPQPGNTIEQRLDSLESAVACASSADPFASFRNLPFGRENAYRFGLSFSQTLF
                     TGGQLRGQSQAAGAGVRSAAVGLTAARAQLLLDVTGAYFDASLADRLLAIAEATLRQA
                     DTTLSQTQLARQVGNQSEFDLLRARVTRDNQRPVVIQRRADRDLAQYRLKQLLDLPLD
                     QPLALTTELGDSAMVDSTRLRTVTEQLGDTTIAARAPVRQASEAVEAQRGLLRVARGQ
                     RFPQVAVTSQYAQLAYPNKVSPFGADFVSDWSVTLGLQVPLFNGGRIGGEIAAAEANL
                     TQAELRLQQSRELAQVDARNALIQLEAA"
BASE COUNT          187 a          343 c          371 g          186 t
ORIGIN      
        1 cggccgcctc caactgaatc agagcgttgc gggcatcgac ttgcgccagc tcgcgcgact
       61 gctgcagccg gagctcggcc tgggtcagat tggcctcagc cgcggcgatc tcgccaccga
      121 tccttccgcc gttaaacagc ggcacctgca acccgagcgt cacgctccag tcggatacga
      181 agtcggcgcc gaagggagag accttgttgg ggtaggccag ttgcgcgtac tgggaggtca
      241 ccgccacctg aggaaaacgc tgccctcgcg ccactctgag caggccacgc tgagcctcga
      301 ctgcttcgga ggcctgacgc accggtgcgc gagcggcaat cgtagtatcc cccaactgct
      361 cggtcaccgt cctcagcctg gtggagtcga ccatggcact gtcccccagc tcggtcgtga
      421 gcgcgagcgg ctgatcgagt ggaaggtcca acagctgctt gaggcggtat tgggccagat
      481 cgcgatcggc cctgcgctga atgacgaccg gccgctggtt gtcccgagtc acccgagcac
      541 gaagcagatc gaactccgat tggttgccca cctgtcgcgc gagctgcgtc tgggacagag
      601 ttgtatctgc ctgcctgagc gtcgcctcgg cgatcgcaag gagccggtcg gcgagggatg
      661 cgtcgaagta cgctccggtg acatcgagca gcagctgcgc ccgggcggca gtgagaccga
      721 ccgctgcgct ccgaactccc gcccctgcgg cctgggattg gccccgcagt tgccctccag
      781 tgaacaacgt ttgggaaaag gagagcccaa agcggtaggc gttttcccgc ccgaacggca
      841 ggttccgaaa gctggcgaac ggatcggcac tgctggcaca ggcaacggcg ctttcgaggg
      901 agtcgagccg ctgctcgatg gtattgcccg gctggggaat gaatcgattg cagatctggc
      961 ccgtgctggt gctggtgtcg gtgccggcgt tgagcgccga gaactggctc ctgagggtcc
     1021 gttgatagga ggccgaaccg ttgagctgag ggaagtaggc actccgggca cggcggcggt
     1081 cgccttc
//
LOCUS       DASRPQ010001992         1045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1504764, whole genome shotgun sequence.
ACCESSION   DASRPQ010001992 DASRPQ010000000
VERSION     DASRPQ010001992.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1504764"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..291)
                     /locus_tag="VFD73_22590"
     CDS             complement(<1..291)
                     /locus_tag="VFD73_22590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76764.1"
                     /translation="MHTRHTRALLTGVLGFLSACGQSKATAPIVELAPAGDTVLSHYT
                     DVTDAAWLGGTRWVVLAPTDDAVSIVDFAPKKLTPLGAKEFQHPSAVYFTADT"
     gene            complement(371..>1045)
                     /locus_tag="VFD73_22595"
     CDS             complement(371..>1045)
                     /locus_tag="VFD73_22595"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HZI76765.1"
                     /translation="GQSVAGAINGTVRLTFPARPGVCGNGADNISTRRTDEEWESDCE
                     AGPVRVALRVSHGRVLGLRTYVGGRWRQLADVTDLGIVRPQAAAEYLLSLARLPENLD
                     GDPLLPATLADSITIWPSLLQLARDDKLPTKRRRSAVFWLSQAAEASAGNALDSVVND
                     NSTDREVRKEAVFALSQRDPSEGVPRLIHVVKTNPDPELRKAALFWLGQTDDPRALDL
                     FEQLLQ"
BASE COUNT          207 a          311 c          334 g          193 t
ORIGIN      
        1 ggtgtcagca gtgaagtaga cggccgaggg gtgttgaaat tccttggccc cgagtggagt
       61 cagtttcttg ggggcaaagt ccacgatgct gaccgcatca tcggtcggtg cgagaacaac
      121 ccaacgagtc ccgccgagcc aggcagcatc agtgacatca gtgtagtgag agaggacggt
      181 gtctccggca ggcgccagct ccacaattgg agcggttgct ttggactgcc cacacgcgct
      241 gagaaacccc agaacaccgg tgagaagcgc tcgagtatgt ctggtgtgca ccgggcgaaa
      301 tgtaatggca tggcccgaac gatcggcgct ccagcgctct cgtcagcgaa cggcgaaagg
      361 gtccttccgc ctactgcagc agttgttcga acagatcgag tgcgcggggg tcgtcggttt
      421 ggccgagcca gaacagagcg gctttccgca actcgggatc gggattggtt ttcaccacgt
      481 gaatcagtcg gggcacaccc tccgagggat cccgctggga gagtgcaaac accgcctctt
      541 ttcgaacctc ccggtcggtg ctgttgtcgt ttacgactga atcaagagca tttcccgcag
      601 aggcctctgc tgcttgactc agccagaaaa cggcggatcg gcgccgtttt gttgggagct
      661 tatcgtctcg ggccaactga agcagcgatg gccagatggt gatgctgtcg gccagcgtcg
      721 cgggaagcag gggatctcca tccaagttct ccgggagccg ggccaaactc aggagatatt
      781 cggcggcggc ttggggccgg acgatgccga gatcggtaac atctgccaac tggcgccacc
      841 ttcccccaac gtaggttcgg agcccgagca cccggccgtg actgacccgc aaggcaaccc
      901 gcaccggccc ggcctcgcag tccgactccc attcttcatc ggtccgacgg gtggaaatgt
      961 tatcggcgcc gtttccgcag actccgggac gcgccggaaa agtcaggcga acggttccgt
     1021 taatggcgcc ggccacactc tggcc
//
LOCUS       DASRPQ010001993         1001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_541072, whole genome shotgun sequence.
ACCESSION   DASRPQ010001993 DASRPQ010000000
VERSION     DASRPQ010001993.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_541072"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VFD73_22600"
     CDS             <1..184
                     /locus_tag="VFD73_22600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76766.1"
                     /translation="YASVFGVGEFLIGNSARGWLECFIAIGAFLLIQRNLRADEGLAA
                     DVDTALSPRLQLDPGE"
     gene            222..587
                     /locus_tag="VFD73_22605"
     CDS             222..587
                     /locus_tag="VFD73_22605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HZI76767.1"
                     /translation="MSIEQQAPAGGFIVTLTSRAAEEVQKFITSEQVPAESAGLRVSV
                     LPGGCSGFKYSLNIEERPLEDDMVSEVNGVRVFVDGFSAQYLTGVTIDYVSSMQGSGF
                     TFSNPNATGGCGCGSSFTA"
     gene            707..>1001
                     /locus_tag="VFD73_22610"
     CDS             707..>1001
                     /locus_tag="VFD73_22610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76768.1"
                     /translation="MRSLDLAVVVLYFCFTLGVGLWVARHQRSATDYFLGARDLPAWA
                     ILLSIVATETSAITVISVPGIGARGDLTFLQLTFGYLIGRIGVARWLLPGYFRG"
BASE COUNT          164 a          298 c          311 g          228 t
ORIGIN      
        1 ctacgcctcg gtgttcgggg tgggcgaatt cctgatcgga aactccgccc gcgggtggct
       61 tgaatgcttc atcgcgatag gggctttctt gttgattcag cgtaacttgc gcgccgatga
      121 agggctggcg gccgacgttg acaccgccct cagtccccgg ttacaattgg atccgggaga
      181 atgaggtcca ccagtcgccg ttggtacgga aggagcagcg aatgagcatc gaacagcagg
      241 ccccggcagg cgggttcatc gtgaccctca ccagtcgggc ggctgaagag gtgcagaagt
      301 tcatcacctc ggagcaggtg ccggcggagt cggccgggct ccgggtcagt gtcctgccgg
      361 gcggctgctc gggattcaag tacagcctga acatcgaaga gcggcccctg gaagacgata
      421 tggtttccga agtgaatggg gttcgggtgt ttgtggatgg tttcagcgcg cagtatctga
      481 ctggcgtcac catcgactac gtgagctcga tgcagggctc aggctttacc ttcagcaatc
      541 ccaacgcaac tggtggctgt gggtgcggca gcagctttac tgcttgaaaa cagtaggcgg
      601 tgagcgataa gccggcggcc ggtagagatc actctctccg gccgctcttc ttttggagtg
      661 agtcgtcaac cccgggctcg cctctcaccg ctcaccgctc accgttttga gatccctcga
      721 tctcgcggtc gtcgtcctct acttctgctt tactctcggt gtcgggctgt gggttgcccg
      781 ccatcagcgt agcgcaacgg actactttct cggtgcccgc gatcttcccg cctgggcaat
      841 tctgctttct attgtcgcca ccgagacctc tgccatcacc gtcatttcgg tgcccggaat
      901 cggcgcgaga ggggatctca ccttcctcca gctcactttc ggttatctca tcggccgtat
      961 cggagtggcc cgctggctgc tccccggata tttccggggc g
//
LOCUS       DASRPQ010001994         3323 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_857012, whole genome shotgun sequence.
ACCESSION   DASRPQ010001994 DASRPQ010000000
VERSION     DASRPQ010001994.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3323
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_857012"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2228
                     /locus_tag="VFD73_22615"
     CDS             <1..2228
                     /locus_tag="VFD73_22615"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M28 family metallopeptidase"
                     /protein_id="HZI76769.1"
                     /translation="SAFSSADQAPIRGFTRHSAQAERQLESTFRAVPTPDSMRSYMRI
                     LSARPHHLGSPRDSVNAEWILQRFRDWGWDARIETFRVLFPTPLDRLVELVSPGHFRA
                     SLREPAVKVDPTTAQQAEQLPTYNAFSIDGDVTAPLVFVNYGVPDDYERLKRMGISVK
                     GAIVIAKYGRSWRGIKPKVAAEHGAVGCLIYSDPADDGYHAGDVYPAGPFRPGEGVQR
                     GSVLDMPLYAGDPLTPGVGATETAKRLPRAEAPTITKIPVLPLSYDDARPLLAAIGGR
                     PAPVEWAGALPITYHMGPGPARVHLRVKSDWRLSTVRDVIARMPGRDLPDQWVVRGNH
                     HDAWVNGAQDPISGLVALLEEARGIGALVKQGWRPRRTIVYAAWDGEEPMLLGSTEWA
                     ETHAEELTRNAVAYVNTDASGRGVLSVQGSPTLARMLTEVTKEVTDPETNLSVWKRAH
                     LTEIGTAGSRDARQKARGREDLAVDPMGSGSDYTAFYHHLGIPSLNIGFGGEDDGGVY
                     HSIYDSYHWFTTFSDSGFVFGRALAQTTGITVLRLANADLLPYEFTALATRVSDNLKE
                     VQNLLKSARDSIEEQNRELEESTFVALNDPQRPTVAPDREDVPPHLNFAPLENAADRL
                     KRAADQYGDALGDADQKPDSVFTPDRLAGLNAQLLQMERLLAPSDGLRRRPWYREVLS
                     APGWYTGYAPKILPGVREAIEEKRWREGEDEVVRIGKALDDESAALEKLTAGIRRLAP
                     Q"
     gene            2271..2918
                     /locus_tag="VFD73_22620"
     CDS             2271..2918
                     /locus_tag="VFD73_22620"
                     /inference="COORDINATES: protein motif:HMM:NF024587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidylate kinase-like family protein"
                     /protein_id="HZI76770.1"
                     /translation="MGSGFRAPIRLITISREYGAGGSELGILLGRSLGWPVLDHELIG
                     KLAQRLSCEEGDVVAMDEHAPSFLERLAAVATVTAPESRVHSRPWATDPDCVAVAARE
                     VLLEAAQNLPLIVVGHGGNCLFKDRPDVLRVRVTAPREVRVRRVARRESMSPAQAAAT
                     VRRRDSDRQNYLQRYYQNDIHDTSSYDVQINTATISLENAAELVLCLIRSSEQQQ"
     gene            2944..>3323
                     /locus_tag="VFD73_22625"
     CDS             2944..>3323
                     /locus_tag="VFD73_22625"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI76771.1"
                     /translation="MTANASSELAAAPPPARAAAPRLTPAEEAAAFVTRYRWVIMAGL
                     ITAAIMEVLDTTIINVALPQMAGNLGATQQEISWVATGYILSNVVVLPMTAFFTERIG
                     RQRYLTTSIIIFIVASFFCGTSSSL"
BASE COUNT          589 a         1083 c         1095 g          556 t
ORIGIN      
        1 tctccgcatt ctcgtcggcc gaccaagctc cgattcgcgg attcactcgg cactccgctc
       61 aggccgagcg acagctcgaa agcacgtttc gagcagtgcc gactcccgac tcgatgcgct
      121 cgtacatgcg cattctctcc gcgcgaccgc atcacctcgg gtcgccccgg gacagcgtca
      181 acgccgagtg gatcctgcag cgattccgcg actgggggtg ggacgctcgc atcgagacct
      241 ttcgagtcct ctttcccacg ccgctggacc gcctggtcga gctggtgtcg cctggccact
      301 tccgagcctc gctgagagag cccgccgtca aggtcgatcc cacgacggcc cagcaggccg
      361 agcagcttcc cacctataac gcgttctcca tcgatggcga cgtcacggcg ccgctggtct
      421 tcgtcaacta tggagttccc gatgactacg agcgcctcaa gcgcatgggg atctcagtca
      481 agggcgcgat cgtgatcgcc aagtacggcc ggtcatggcg cggaatcaaa cccaaagtcg
      541 cggcggagca tggtgcggtt ggctgtctca tctactccga ccctgcggat gacggatacc
      601 acgccggaga cgtgtatccg gcgggtccgt ttcgtcccgg tgaaggcgta cagcggggca
      661 gcgtgctcga catgccgctc tacgccggag atccgctgac ccccggagtc ggagcgaccg
      721 agaccgccaa gcggctgccc cgcgccgagg cgccgacgat cacgaagatt cccgtgctcc
      781 cgctgtccta cgatgatgcc cgccccctgc tggcggcgat cggcggccgg ccggctccgg
      841 tggaatgggc tggagcgctc ccgatcacct atcacatggg gcccggcccc gcccgggtcc
      901 acctgagggt gaaatcggac tggcggcttt caacggtgcg tgacgtgatt gcccgaatgc
      961 cgggcagaga cctcccggat cagtgggtgg ttcgcggcaa tcatcacgat gcctgggtca
     1021 atggtgccca ggatccaatc tccgggctgg tcgcactgct ggaggaggcg cgcgggatcg
     1081 gcgcgctggt caagcaaggc tggcgtccgc gccggaccat cgtctacgcc gcctgggacg
     1141 gcgaagagcc gatgctgctc ggctcgacgg agtgggccga gacccacgcc gaggagctca
     1201 cccgaaatgc ggtggcctat gtcaataccg acgcgagcgg acgcggggtg ctgagcgtgc
     1261 aggggtcgcc cacgctggcg cggatgctca ccgaagtgac gaaagaggtc accgatcccg
     1321 agaccaacct cagcgtctgg aaacgcgctc atctcaccga gatcgggacc gcagggtcac
     1381 gggatgcgcg gcagaaggca cggggccgtg aggatctggc cgtcgatccg atggggtcgg
     1441 gctccgacta taccgcgttc tatcatcatc tcggtatccc ttcgctcaat ataggcttcg
     1501 gaggagagga cgacggggga gtgtaccact cgatctacga cagctaccac tggttcacca
     1561 cgttcagtga cagcgggttc gtctttggcc gcgcgctggc ccagaccacg ggaatcaccg
     1621 tcctgcggct ggccaacgcc gacctgctcc cgtacgagtt cacggcgctg gccacgcgag
     1681 tgagcgacaa cctcaaagag gtgcagaatc tgctcaagag cgcgcgtgac tcgatcgagg
     1741 agcagaaccg ggagctggag gagagcacgt tcgttgcctt gaacgatcca caacggccca
     1801 ccgtcgcgcc ggatcgggag gacgtcccgc cgcatctcaa cttcgcgcca ctggagaatg
     1861 cggcggaccg gctgaagcgg gcggcggatc aatatgggga cgcgctgggt gacgccgatc
     1921 agaagccgga cagcgtcttt actccggacc ggctggccgg gcttaacgcc caactgctcc
     1981 agatggagcg actgctggct ccctccgacg gcctccggcg cagaccctgg taccgcgagg
     2041 tgctgagtgc tccgggctgg tataccggct atgcacccaa gattctgccg ggggtcagag
     2101 aggccatcga ggagaagcgc tggcgtgagg gagaggacga ggtggtccgg atcgggaagg
     2161 cactggacga tgagtcggca gcgctggaga agctcactgc cggaattcgg cggctcgctc
     2221 cgcagtaatt ttccggtcat attgaaagtt gcagctctag tggagggacg atgggaagcg
     2281 ggtttcgagc gccaattcgt ctgatcacca tctcgcgcga atacggcgcg ggtgggagcg
     2341 agctgggaat tctgctgggc cgcagcctgg gctggccggt gctggatcac gagctgatcg
     2401 gcaagctggc gcagcgtttg agctgtgagg agggcgacgt ggtggccatg gacgagcacg
     2461 ctccgagctt cctggagcgc ctggccgcgg tggccaccgt aaccgcaccg gaatcgcggg
     2521 tgcactcgag accctgggcc accgacccgg actgcgtggc agtggcggcg cgcgaggtgc
     2581 tcctcgaggc ggcgcagaat ctcccgctca tcgtggtagg ccacggcggc aactgtctct
     2641 tcaaggatcg acccgatgtg ctccgggtac gggtcacggc cccccgggaa gtgcgggtga
     2701 gacgggtggc ccggcgggag agcatgtcgc cggcacaagc ggcggccacg gtccgccggc
     2761 gcgattcgga ccgtcagaac tacttgcagc ggtactatca gaacgacatc cacgatacgt
     2821 ccagctacga cgtgcagatc aacaccgcca ccatctccct ggagaacgcc gccgaactgg
     2881 tcctctgcct gatccgctcc agcgaacagc aacagtagcc cctcgtcttt tctcggcccc
     2941 cttatgacgg ccaacgcgtc ttccgaactc gccgctgctc ccccgcctgc gcgggccgct
     3001 gctcctcggc tcactccagc agaagaagcg gcggcattcg tcacccggta ccgctgggtc
     3061 atcatggcgg gcctgatcac cgcggcgatc atggaggtgc tggacaccac catcatcaac
     3121 gtggcactgc cccagatggc cgggaacctg ggcgcgacgc agcaggagat cagttgggtg
     3181 gccaccgggt acatcctgtc caacgtggta gtccttccga tgaccgcctt cttcaccgag
     3241 cggatcggga ggcaacgcta tctcacgacg tccatcatca tcttcatcgt ggcgtccttc
     3301 ttctgcggca cctccagctc gct
//
LOCUS       DASRPQ010001995         1193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_857123, whole genome shotgun sequence.
ACCESSION   DASRPQ010001995 DASRPQ010000000
VERSION     DASRPQ010001995.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_857123"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(266..628)
                     /locus_tag="VFD73_22630"
     CDS             complement(266..628)
                     /locus_tag="VFD73_22630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76772.1"
                     /translation="MGSLAIVGMMVGMMIGRLTAPDPSQLQQVEVTSDGLVVWFNNEP
                     ETHGEMVDGSVALLFGAEGKAQKGQLKLGGKDVNWRVRLSDGGLLLTLVAARPLQGEW
                     AGSEVDDRWRLEIHLREQ"
     gene            704..1159
                     /gene="trmL"
                     /locus_tag="VFD73_22635"
     CDS             704..1159
                     /gene="trmL"
                     /locus_tag="VFD73_22635"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HZI76773.1"
                     /translation="MFHVILFQPEIPPNTGNVIRLCANSGCHLHLIEPLGFEMDDKRL
                     RRAGLDYHEYATLQRHADLASCLESLGHPRVFAFTTKGSRPFHDASFAPGDAFLFGPE
                     SRGLPAEVLDALPADQRLRLPMREGCRSLNLSNTVAVAVYEAWRQNGFK"
BASE COUNT          218 a          425 c          322 g          228 t
ORIGIN      
        1 cattgtgaaa actggcacgc cccctgcaat aaccctttca agtgaatcag ttcacctacc
       61 cggtttcggg gaccttggta caggcaggcc ggggattccc ctctttaaca ccgggctcac
      121 accgcagctg cgacgagccc gaccgttttg gggcccttga tacaggcagg tcaggggttc
      181 cttctttaca ccaggctcaa accgcactcg cgacgagcct cccgtttcgg gaaccttggt
      241 acaggcaggc cggggattcc ctcttttatt gctcccggag atggatctcc agccgccagc
      301 ggtcatcgac ctcgctaccg gcccactcgc cctgcagggg ccgggccgcc accagtgtca
      361 gcaacaaccc cccatcgctc aaacgtaccc gccagttcac gtccttgccg ccgagcttga
      421 gctggccttt ctgcgccttg ccctcggcgc caaacagcag cgcgacactg ccgtccacca
      481 tttcgccgtg ggtctcgggc tcgttattga accacaccac cagtccatcg ctcgtcactt
      541 caacctgctg caactgactg gggtctggcg cggtcaggcg accgatcatc atcccgacca
      601 tcatcccgac aatcgccagc gagcccatta cccgcaggaa tagtttcgaa cgcacgcctt
      661 ctggcggcgt agaatgcgcg tcatcttacc ttcggagccg tgcatgtttc acgtcatcct
      721 tttccaacca gaaattccgc cgaataccgg caacgttatc aggctgtgcg ccaacagtgg
      781 ctgccacctg catttgatcg agccgctggg cttcgagatg gacgacaagc gcctgcgccg
      841 ggccggtctc gactaccacg agtatgccac tctgcaacgc catgcggacc tggccagctg
      901 cctggaaagc ctcggtcacc cgcgagtgtt cgcgttcacc accaaaggct cgcgaccgtt
      961 ccacgatgcc agcttcgccc cgggtgacgc gttcctgttc ggcccggaaa gccgtggcct
     1021 gccggccgag gtgctcgatg ccctgcccgc cgaccaacgc ctgcgcctgc cgatgcgcga
     1081 gggctgccgt agcctgaacc tgtcgaacac tgtcgcagtg gcggtctacg aagcctggcg
     1141 ccaaaacggc ttcaagtaac cccccgtagg agctggcttg ccagcgaaag cgg
//
LOCUS       DASRPQ010001996         1338 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_239363, whole genome shotgun sequence.
ACCESSION   DASRPQ010001996 DASRPQ010000000
VERSION     DASRPQ010001996.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1338
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239363"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            394..612
                     /locus_tag="VFD73_22640"
     CDS             394..612
                     /locus_tag="VFD73_22640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76774.1"
                     /translation="MTVGTGASGVRGDLRAFRPAAVALRVIIADVPAPFPASLDDLID
                     GPRVVGLPYSRARNPYASSCLSSRSLPP"
     gene            complement(1213..>1338)
                     /locus_tag="VFD73_22645"
     CDS             complement(1213..>1338)
                     /locus_tag="VFD73_22645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_100160675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HZI76775.1"
                     /translation="QVFTSNADRAAALAPWLEHYNTRRRHSALAGHPPISRLSTT"
BASE COUNT          213 a          437 c          440 g          248 t
ORIGIN      
        1 ccactcgcaa accggctcag cgaccgtgcc cgggtgggcc cgatgctgcc cacgggcatc
       61 gacagcagag aactgatctg ctggtagtcc ttctccttgt ctgcgagcaa cgtgagcaca
      121 gcgacgttgc gcgctgagag ctgctccagc tcttggcgca gtacagccat cgcgtcgctc
      181 cagatgacat gtgcctccgg agacggtccg ggctcacaaa cccgctcgcg ccacctcccc
      241 agtggcatcg ccgtgcaggg tcaaggtcac ggaaagggac ggtgacactt gcctgagaag
      301 gagaccctcg acgaccccct gatacatcag gcgtcgggac gagtgacgct gggcaggtga
      361 tttccggtga tgtgcatcta tggtttccgc gccgtgaccg ttggcactgg ggcatcgggg
      421 gttcggggcg atttgcgtgc tttccgtccc gcagcggtcg ctctgcgtgt catcatcgcg
      481 gacgtgccgg cgcccttccc cgcctcgctg gacgacctca tcgacggacc ccgcgtcgtc
      541 ggcctgccct actctcgcgc aagaaatccc tacgccagct catgcctgtc cagccgcagc
      601 ctgccccctt gagggggtgg acagcccagg ggccgaccgt gactgctcta cggccaccta
      661 cgtgaggcct cgctcacatg ctggaggccc ggagatccgg ccgggcgtga caagaagcgt
      721 gacaagaacc tgaggcgatc agggaagctc cagcagctcc aggctgatca tgtgtagcca
      781 aaggagcagg tagaaggcct agtcggcgtg gtgcatcacc cttctaatcc gagggtcgcg
      841 ggttcgatcc ctgccgggcg cgctcggtga cgtctcagga cgtccgcata ggtcgaaacc
      901 gaacatcggg tttcggatct tgtgcgtttg gtagcccccc gtgcgtccag ggtgagctca
      961 cgcagcgcgt cgccggtagc agcgtcggtg actcagatct gcaggttctc gtcccgcgga
     1021 tctcatccag ctggcctcga cacgtctcgt gaatcgacgt cgtctggcgt ttacggcacc
     1081 cgagaccggg agtctctcca ggccgagcgg ggagcccgtc ccctttttgc ctcagcccga
     1141 ccggttccgc cgatcccgcc ggtgacactg cgcgccaact cgtgaggctc cgcgcctagg
     1201 tgtatccggc catcacgttg ttgacaggcg gctgatcggc ggatggcctg ccagggcgct
     1261 gtggcgtcgt cgagtgttgt agtgctcgag ccagggggca agggcggcgg cgcggtcggc
     1321 gttgctggtg aagacctg
//
LOCUS       DASRPQ010001997         1432 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_857319, whole genome shotgun sequence.
ACCESSION   DASRPQ010001997 DASRPQ010000000
VERSION     DASRPQ010001997.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1432
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_857319"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..787
                     /locus_tag="VFD73_22650"
     CDS             <1..787
                     /locus_tag="VFD73_22650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76776.1"
                     /translation="AVARDLGGTAYDVGVYSVDYPHIHPRTYPKPATTSLRVASLLLP
                     HLARVGYIRGAADRVPEALTSIGVPVTSLGPAALEQGDLNRYDAIIVGPRAYEVDSAL
                     VENNRRLLEYARRGGLVIVQYQQQAYFNGGFAPYPLQVGGPSPRGVVVHDRVTDENAP
                     VQVVAPSSPVVLTPNRIGAADWQGWVQERGLYYARSWDRHYRPVLRMNDPGDPPLEGG
                     LLVAPLGQGTYVYTGLSFFRQLPAGVPGAFRLFANLLALPHGR"
     gene            849..>1432
                     /locus_tag="VFD73_22655"
     CDS             849..>1432
                     /locus_tag="VFD73_22655"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HZI76777.1"
                     /translation="MMGARRWWRYLSALSALSAIAAPSACSTDHRTPLVLYSPHGRDQ
                     LSLLEHAFEKLHPDVDVRWLDMGSQEILDRLRFERVNPQADVWFGGPTTIFDRGVHDS
                     VLVPYRPVWWDKVGAGSSREPAFYYPAYRTPAVIAYNSKAVSAAEAPQDWDDILAPRW
                     KDKVIIRDPMASGTMRAIWGLIIFRSIRQTGDTTS"
BASE COUNT          245 a          468 c          436 g          283 t
ORIGIN      
        1 agcagtggcc agagatcttg gcgggacagc atacgatgtc ggggtgtata gcgtcgacta
       61 tccccacatt catcctcgaa cctaccctaa gccggccaca accagtttgc gggtcgcgtc
      121 gctgctgttg ccccatctcg cgcgcgtcgg gtacatccgc ggggccgccg accgggttcc
      181 cgaggccctg accagcatcg gtgttcctgt cacgtcgctc ggccccgcgg cgctggaaca
      241 gggtgatctg aaccgctacg acgctataat cgtcggaccc cgcgcgtacg aggtcgattc
      301 cgctctggtc gagaacaacc gccgcctgtt ggagtacgcc cggcgtggcg gtctcgtcat
      361 cgtacagtac cagcagcagg cctacttcaa cggcggcttt gctccgtacc cactgcaggt
      421 gggagggcca tcgccaaggg gagtcgtcgt tcacgaccgc gtcacggatg agaatgcgcc
      481 ggtccaggtc gttgcgccga gcagcccagt cgtgctcact cccaatcgca tcggtgccgc
      541 ggactggcaa ggctgggtgc aggagcgtgg tctctactat gcccgctcct gggaccgcca
      601 ctaccggccg gttctccgga tgaacgatcc cggcgatccg ccactggagg gcggccttct
      661 ggtcgccccg ctgggacagg gcacctacgt gtacaccggc ttgagcttct tccgacaatt
      721 gccggccggt gttcccggtg cgttccgcct ctttgccaat ctccttgctc tgccgcatgg
      781 gcggtaatgg aagaggcggt agaagcggaa aaaagcgagg aagcggaaaa agcggaggac
      841 gccgaataat gatgggcgct cgcaggtggt ggcgttatct ctcggctctt tccgctcttt
      901 ccgccattgc tgctccttcg gcatgctcca ctgaccatcg cactcctctc gtcctctact
      961 ccccgcatgg ccgggaccag ctgtcgctac tggagcatgc cttcgagaag ctccatcccg
     1021 atgtcgatgt ccgctggctc gacatgggat cacaggaaat cctggatcgg ctccgttttg
     1081 agcgggtaaa tcctcaagcg gacgtctggt tcggagggcc gactacgatt ttcgaccgcg
     1141 gcgttcacga ttccgttctg gtgccgtatc gccccgtctg gtgggacaag gtcggggcgg
     1201 gatcgtcgcg agagcccgcc ttctattatc ctgcctaccg aacccctgcg gtcatcgcgt
     1261 acaacagcaa ggcagtctcc gcggccgagg cgccccagga ttgggacgac atcctggcgc
     1321 ctcgctggaa agacaaggta atcatccgcg atcccatggc cagcggtaca atgcgggcga
     1381 tctggggact catcatcttt cgcagcatcc gccagaccgg tgacaccacc tc
//
LOCUS       DASRPQ010001998         1022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3401251, whole genome shotgun sequence.
ACCESSION   DASRPQ010001998 DASRPQ010000000
VERSION     DASRPQ010001998.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3401251"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..513
                     /locus_tag="VFD73_22660"
     CDS             <1..513
                     /locus_tag="VFD73_22660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI76778.1"
                     /translation="LDRPTDGRIYLAGEDLGTLTEDERARLRVEKIGFVFQSFQLIPT
                     LTAQENVQVPLELRGDSGTVERSRELLSRVGLGGREHHYPAQLSGGEQQRVALARAFG
                     IRPQLLFADEPTGNLDASTGATIIQLMVELNQESSTTVVLVTHDLELAARARRTIRLA
                     DGVIVGDTGA"
     gene            510..>1022
                     /locus_tag="VFD73_22665"
     CDS             510..>1022
                     /locus_tag="VFD73_22665"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI76779.1"
                     /translation="MIALNFVIRMALRELRASPRRLLLLVGTIAIGVSALVAIDSFSD
                     NLRDSVRQQSRALLGADLSLVSRQPLSRTMESVIDSISRGSEQSRVTSFAGMAYVTRT
                     EGSRLVQVAAVSGRYPLYGEIRTAPRQAWQELRSGRHVVVDPSLLTAFNARLGDTLAL
                     GEARFVITGTI"
BASE COUNT          175 a          316 c          330 g          201 t
ORIGIN      
        1 ctggaccggc cgaccgatgg gcgcatctac ctcgctggag aggacctcgg cacattgacc
       61 gaggatgagc gagcccgcct tcgagtcgaa aagatcggct tcgtctttca atcgtttcag
      121 ctgatcccca cgctcactgc tcaggagaac gttcaggtcc ccctggagct gcgcggtgat
      181 tcggggacgg tagagcgatc ccgagagctg ctgagccggg ttggtctcgg tggacgcgag
      241 caccactatc cggcacagtt atcaggtggt gagcagcagc gggtcgccct ggcccgggcg
      301 tttgggatcc gcccccagct gttgtttgcc gatgagccca ccggaaatct ggacgcgtcg
      361 accggagcga cgatcatcca gctgatggtg gagctgaatc aggagagcag taccactgtg
      421 gtgctggtca cccacgatct cgagctggcg gcaagggcgc ggcgtactat acgactggcc
      481 gatggggtaa tcgtgggcga tacgggcgca tgatcgctct caacttcgta attcgaatgg
      541 cgctgcgcga gctacgggct tcgccgcggc gcctgctcct gctcgtaggc accatcgcca
      601 tcggtgtctc cgctctggta gcgattgact cgttcagtga caaccttcga gactccgttc
      661 ggcaacagtc tcgcgcattg ctcggcgccg acctgtcgct ggtgagccgg cagcccctct
      721 ccagaacaat ggagagcgtc atcgattcaa tctctcgcgg gagcgagcag tcccgggtca
      781 ccagctttgc gggaatggcg tacgtaaccc gcaccgaggg aagccggctg gtccaggtgg
      841 ccgcggtgtc cggtcgctac cctttgtacg gcgagattcg aaccgctccg cgtcaggcat
      901 ggcaggagct ccggtcggga cgccacgtcg tggtcgatcc ctcgttgctc actgcattca
      961 atgctcggct gggcgatacc cttgccctgg gcgaagctcg attcgtgatc accgggacca
     1021 tc
//
LOCUS       DASRPQ010001999         1150 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2775735, whole genome shotgun sequence.
ACCESSION   DASRPQ010001999 DASRPQ010000000
VERSION     DASRPQ010001999.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2775735"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VFD73_22670"
     CDS             complement(<1..268)
                     /locus_tag="VFD73_22670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76780.1"
                     /translation="MLPPADYGKYPALTTGNPIDVVLRWLRYDLFDAERVAQETTAGI
                     STVCPVLVHHRIVVSSKQALAELSAPLAAHGLGLESVIGGTRGRP"
     gene            621..>1150
                     /locus_tag="VFD73_22675"
     CDS             621..>1150
                     /locus_tag="VFD73_22675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76781.1"
                     /translation="MRRGWNVVSRRGWILGLIIGLALASTGCAAIGSAVGPSPTVTGP
                     EFIERSQVFSSSACTVERVAYTSSQLKILGWIVTPSGPGPWPLLVFNHGSRVGADLVD
                     HSADPTWQPAFGCSDYLTDNRWMVFLPEGRGYGGSEGPGMGPVLRGELPVMQMLHGRA
                     DDVNAGVTQLERQANVR"
BASE COUNT          208 a          355 c          371 g          216 t
ORIGIN      
        1 tcggtctccc acgcgtgccc ccaatgacgc tctccaatcc caacccgtgc gccgcgaggg
       61 gtgcgctcag ttcagcaaga gcctgtttgg aggagaccac aatgcggtgg tgcaccagta
      121 ccgggcaaac ggtactgatg cctgccgtcg tctcctgtgc aacacgctcc gcgtcgaaga
      181 ggtcataccg caaccagcgg agcacgacat ctatcggatt accggttgtc agcgccggat
      241 acttgccata gtcggcgggt ggcagcacgg gtgttccggg agggatatgt tggacgagga
      301 accgtcagac ttcgtggaac gagttgtcgg cggcgttgac ctgcgagaac gagttgctcg
      361 accccgctga gcgcttcgcg ggggtagcgt ggatcgtagt cggccgcatg tcaatagatg
      421 gctggccggg ttggatcgaa tccgacgcgc cctgacgcct agtagcggca agcccgaaag
      481 caggaggtac agcccgagaa gcactagccc aaacaggccc acttcgaggc tgctcatagc
      541 gcccgtttga gcgacctcgt tgcggtcgcg ccacccaggt gccccagccg gccatctcaa
      601 tttctgtcca caataggaac atgcgccgcg gatggaatgt cgtgtcgcgt cgcggctgga
      661 ttctggggct gatcattggg ctagcgctcg cgagcactgg ctgcgccgcc attggctccg
      721 cggttgggcc gtcacccacg gttaccgggc ccgagttcat cgagcgctcc caggtcttca
      781 gcagcagcgc ctgtaccgtc gagcgcgtgg cctacaccag ttcgcagctg aaaattctcg
      841 gctggatcgt cacacccagc gggcccggcc cctggccgct gcttgtgttc aaccacggct
      901 ccagagtcgg ggccgacctc gtcgatcatt cagccgatcc aacctggcag ccagcgtttg
      961 gctgcagcga ctatctcacc gacaatcgtt ggatggtgtt cctgcccgaa ggccgcggct
     1021 atggtggctc agaaggaccg ggcatgggtc cggtgttgcg gggggaactg ccggtgatgc
     1081 agatgctcca tggacgtgcc gatgacgtta atgctggtgt cacacagttg gagcgacaag
     1141 ccaacgtgcg
//
LOCUS       DASRPQ010002000         1076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3048765, whole genome shotgun sequence.
ACCESSION   DASRPQ010002000 DASRPQ010000000
VERSION     DASRPQ010002000.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3048765"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..672
                     /locus_tag="VFD73_22680"
     CDS             136..672
                     /locus_tag="VFD73_22680"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI76782.1"
                     /translation="MEVRSVKQFLEYWDTLRGRTRRVIGCIPPDRVEWTHRSGAFTLG
                     DQVRHLATIERYMYAETVAGRPSRYPGCGRELADGYEAVLAYFDSLDAESRAIIGSLS
                     DADLQRKCQTPAGTAITTWKWLRAMCEHEAHHRGQIYLMLGMLGVTTPPLFGLTSEEV
                     RDRSVNGGRDTKLRPGGS"
     gene            669..>1076
                     /locus_tag="VFD73_22685"
     CDS             669..>1076
                     /locus_tag="VFD73_22685"
                     /inference="COORDINATES: protein motif:HMM:NF022606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2938 family protein"
                     /protein_id="HZI76783.1"
                     /translation="MIHQPRYIIGAILVGLGATLLIDLWALFLRHGFGIPSLNYCLLG
                     RWILHLPGGTIVHPNITTAPPKPHECTMGWVAHYLIGTVFALVFVLLVSESWLERPTP
                     VPALAFGIATTLVPYLIMQPSFGLGVAASKTPHP"
BASE COUNT          184 a          331 c          337 g          224 t
ORIGIN      
        1 accgtgcccg ctggctgcgc aatctgatcg gcgatgaggc aacgatggtg gtgtacctgg
       61 gcattgcagc gatcatggtc tgggtcgggc tgaacaccga ctggaccttc ggccgacgct
      121 agaggatcgt gctgaatgga agtccggtcg gtaaaacagt tcctggagta ctgggataca
      181 ctgcgcggac gaacccgcag ggtcatcggt tgcattcctc ccgatcgcgt ggaatggacc
      241 caccgatccg gcgcctttac gctcggcgac caggtccgcc acctggcgac gatcgaacgc
      301 tacatgtacg ctgagaccgt ggccgggcgc cccagccggt atcccgggtg tggtcgtgaa
      361 ctggccgatg ggtatgaggc agtgctggcg tatttcgatt ccctggacgc tgagtccagg
      421 gcgatcattg gatcgctgag cgatgccgac ctccagcgga agtgccagac tcctgccggt
      481 acggcgatca cgacctggaa atggctccgc gcgatgtgtg agcacgaagc gcatcatcgg
      541 gggcagatct acctgatgct tggcatgctg ggcgtcacga cgccgccgct gttcgggttg
      601 acctcagaag aggttcggga ccggtcggtc aatggtggaa gggacaccaa gctgcggccc
      661 ggcggatcgt gattcaccag ccgcgctaca tcatcggcgc aatcttggtg ggcctcggcg
      721 caacgctttt aatcgacctc tgggcattgt tccttcgaca tggcttcggc attccgtcgc
      781 tcaactactg cctgctaggc cggtggattc tccacctccc gggtggcacc atcgttcatc
      841 ccaatatcac taccgctccg ccgaaaccgc acgagtgcac aatgggttgg gtggctcact
      901 acctgatcgg gaccgtcttc gccctggttt ttgtcctgct agtctcggag agctggctgg
      961 agcggccgac cccggtgccg gcattggcat tcgggattgc cactacgctg gtgccctatc
     1021 tcatcatgca gccatcgttc gggctcggcg ttgccgcttc caagacccct catccc
//
LOCUS       DASRPQ010002001         3647 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2138915, whole genome shotgun sequence.
ACCESSION   DASRPQ010002001 DASRPQ010000000
VERSION     DASRPQ010002001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3647
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2138915"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..938)
                     /locus_tag="VFD73_22690"
     CDS             complement(<1..938)
                     /locus_tag="VFD73_22690"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HZI76784.1"
                     /translation="MHVKHLTLFLVALWACGRSTPVPAPQPAAFPPQAGPTGVDVDQL
                     IADMPLRDQIAQLVMPWIPGGYSAFDDDAFLRMQGWVDSLHVGGLIISVGSPYEVAAK
                     LNRLQTRSKLPLLIGSDLEGGTAIRLNGGTPFPPNMGVGATGSDSDAYEIGRVTALEG
                     RAVGIHLAFAPVADVNNNPNNPIINTRSFGEDPRTVGRFVAAEVKGLQDNGMLATAKH
                     FPGHGDTGTDSHLALPVIFSNWARLDSVELVPFRSAIAAGVTSIMSAHIALPGINGGQ
                     MQPGTVAPNILTGILRDSLRFQGLVITDALNMAGVA"
     gene            933..2183
                     /locus_tag="VFD73_22695"
     CDS             933..2183
                     /locus_tag="VFD73_22695"
                     /inference="COORDINATES: protein motif:HMM:NF018743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1343 domain-containing protein"
                     /protein_id="HZI76785.1"
                     /translation="MHRSFLLGVLGCVGCAGAGSGSVRPYVAGNSQPRVRPGIDVLLT
                     DSAGLMRDRHVGLVTNQTGVDAEGISDVARLRSAGVHLVALFSPEHGFRGAADPGAAV
                     ASSKDSATGLPIYSLYGSSSAPTDEMLRGIDLMLVDLQDAGARYYTYLATTVAVMRAA
                     GKAHLRVVLLDRPNPIGGMVQGNVLDPAFASSIGLLAVPMRHGLTLGELARLARSDLG
                     IDVQLTVVPAKGWHRSASADQTGLPFVAPSPNLPTLESLFHYPGLCLFEGTNLSVGRG
                     SDRPFEQIGAPWLDTTAVLAVLRKTPLPGVRFESVRFTPHRPGDGKYADTTLAGIRLE
                     VTDRSTYDPPAVAVHLLSAIRSLHSDQFGWIPAHFDRLAGGPDLRRQLDLGTAPEVIV
                     KGWRPALDRYMDRRKSVLLYPDGT"
     gene            2318..3055
                     /locus_tag="VFD73_22700"
     CDS             2318..3055
                     /locus_tag="VFD73_22700"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HZI76786.1"
                     /translation="MKLIRALEKPFYQTVNPLVQWLIRSGIRPNTITTVGTGLVLVSA
                     LAYGTGHIRTGGILLLLSGVADTLDGQVARSGAMVTRFGAFYDSTLDRVGDGATFIGI
                     GAFLLTAPDVAYRTPAIILCMVAILGSLLVSYARARAEGLGLDCKVGIAQRAERILGL
                     GIASLLGGAGPHALLLEAIVALLAVASLITVVQRFGYVYHHAGKVDEALRAEERRHAE
                     VVQQNPEEVRRVKHPVLDPLAKGHSSG"
     gene            3048..>3647
                     /locus_tag="VFD73_22705"
     CDS             3048..>3647
                     /locus_tag="VFD73_22705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004512 - inositol-3-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006021 - inositol biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-3-phosphate synthase"
                     /protein_id="HZI76787.1"
                     /translation="MADRAARQIAPAQGKLGVLCVGLGAVATTFMAGVENIRRGAARP
                     IGSVTQMGTIRLGKRTDKRAPLIRDFAPLAALDDLVFGAWDPVPDDAYTAALQAGVLD
                     RHEHIEPIAHFLKGIKPMPAVFDQAYVKRLEGKNVKPGNSKRELAEALRKDIRDFRTK
                     HQCNRLVMIWCASTEIFISPGPAHWTLEAFEKAIDSNDPT"
BASE COUNT          634 a         1147 c         1177 g          689 t
ORIGIN      
        1 ttggcgacac ccgccatgtt gagcgcgtcg gtgatcacca gtccctggaa ccggagcgaa
       61 tcccgcagaa tcccagtcag gatgttgggt gcgacggtcc ccggttgcat ctgtcccccg
      121 ttgatgccgg gcagtgcaat gtgggccgac atgatcgagg tcactccggc agcgatcgca
      181 cttcgaaatg ggaccagctc caccgaatca agtcgggccc agttggaaaa gatgaccggc
      241 aacgccagat gcgaatcggt tccggtgtcg ccatgaccgg gaaagtgctt ggctgtggcg
      301 agcatcccgt tgtcctgcag ccctttcact tcggcggcga cgaatcgtcc gaccgtccgg
      361 ggatcttctc cgaacgaccg ggtattgatg attgggttgt tcgggttgtt gttgacgtcg
      421 gcaactggag cgaacgccag gtggatgccg accgctcggc cttcgagcgc ggtcactcgg
      481 ccgatctcgt acgcgtccga gtcgctcccc gtggcgccta cgcccatatt tggcggaaat
      541 ggagtaccgc cgttcagccg aatcgcggtg ccaccctcca gatcggatcc gatcagcaac
      601 ggcagcttgg atcgggtttg gagacgattg agcttggccg cgacctcgta cggcgagccg
      661 acggatatga tcaagccccc aacatgcaga gagtccaccc agccctgcat ccgaaggaag
      721 gcgtcgtcgt cgaacgcgct gtagccacca ggtatccagg gcatcacgag ctgcgcaatc
      781 tggtcgcgca gcggcatgtc ggcgatcagt tgatcgacat ccaccccggt cggcccggcc
      841 tgaggaggaa atgccgccgg ctgtggtgcc gggaccgggg tcgatcggcc acaggcccag
      901 agcgcaacaa ggaacaacgt gaggtgctta acgtgcacag atctttcctg ctgggtgtgc
      961 tgggttgtgt cggctgcgcc ggcgcgggaa gtggcagcgt ccgcccgtat gtcgccggca
     1021 actctcagcc tcgagtccgg cctgggatcg acgtgttgct cacggacagc gctggactga
     1081 tgcgcgaccg gcacgttggt ctcgtgacca accagacggg tgtggatgcc gaggggatca
     1141 gtgacgtcgc gcggctgcgc tccgctggtg tccacctggt ggctctcttc agtccagagc
     1201 atggctttcg gggggcggcc gaccctggcg ctgcggttgc gtcatcgaaa gattcggcca
     1261 ctgggcttcc aatctacagc ctttatggct ccagttctgc ccccacggac gaaatgctgc
     1321 gggggataga tctcatgctg gtggatctgc aggatgcggg cgctcgctac tacacgtacc
     1381 tggccaccac agtagccgtc atgcgcgcgg ccggaaaagc gcaccttcgc gtcgtgctgc
     1441 tcgaccgacc gaatccgatc ggcggcatgg ttcagggcaa cgtgctggat cccgcctttg
     1501 cctcgagcat cggtctgctc gccgtcccca tgcgccacgg gctgacgctg ggcgagctcg
     1561 cccgcctggc ccggtccgat ctgggcatcg atgtccaact caccgtcgta ccggcaaagg
     1621 gatggcatcg ctcggcatca gccgaccaga ccgggctccc gttcgtggcg ccgagtccga
     1681 acctgcccac cctcgaaagc ctctttcatt atcctggact gtgcctcttc gaggggacca
     1741 acctgtccgt cgggcgcggg tctgatcgcc cattcgaaca gatcggggca ccctggctgg
     1801 acactacggc agtgctcgct gttctgcgca agactccgtt gcctggcgtt cgcttcgaga
     1861 gcgtgcggtt cacccctcat cggccaggcg atgggaagta cgctgatacc acgctcgcgg
     1921 ggattcggct ggaagtcacc gatcggtcca cctacgatcc tcccgctgtc gcggtgcatc
     1981 tccttagcgc tatccgaagc ctgcactcag accagtttgg atggattccg gcgcatttcg
     2041 accggcttgc cggcgggcca gacctccggc gccaactgga cctgggcact gcaccagagg
     2101 tcatcgtgaa gggttggcgg ccggcgctcg atcgctacat ggatcggcgt aagtcggtgc
     2161 tgctctaccc tgatggcacc tgattgcagc tgccggcgat ccggcttcgg cggtttgtaa
     2221 ttgccctaag cggttctgcc agttatcctt tcgcggcaat ttcgtgcggt caccggaggt
     2281 gtgaccgacc tgcccctcgg cggaggatgg accgaacgtg aagctgatcc gtgcactgga
     2341 aaagcccttt tatcaaacgg taaacccgct ggtacaatgg ctgatccgct ccggtatccg
     2401 gcccaacacc atcaccaccg tggggaccgg tctcgtactg gtctccgccc ttgcctacgg
     2461 gacggggcac atccgcaccg gtggtatcct gctcctcctg agcggcgtgg ccgacaccct
     2521 cgacggccag gtggcgcgga gtggcgcgat ggtgacgcgc ttcggcgctt tctatgactc
     2581 tacgctcgac cgggtcggag atggcgccac gttcatcggg atcggagcgt ttctcctgac
     2641 cgcaccggac gtcgcctatc gaacaccggc gatcatcctc tgtatggttg ccatcctcgg
     2701 atcgctcctg gtctcgtatg ccagggctcg agccgaaggg ctggggctcg attgcaaggt
     2761 ggggatcgcg cagcgagccg agcggattct gggtctgggt atcgcgtcgc tgctcggcgg
     2821 cgcagggccc cacgcactgc tgctggaggc gatcgtcgca ttactcgctg tcgcctcgct
     2881 gatcaccgtc gtgcagcgct tcggctatgt ctaccaccac gcgggaaagg tcgacgaggc
     2941 gctccgggcc gaggagcgca ggcacgctga ggtagtgcag cagaatcccg aggaggtgag
     3001 acgggtcaag cacccggtcc tcgatccgct ggcgaaagga catagcagtg gctgatcggg
     3061 cggcccgtca gatcgccccg gctcagggaa agcttggagt gttgtgcgtg gggctggggg
     3121 ctgtcgcaac gacgttcatg gcaggggtag aaaacattcg gcgaggcgca gcccgtccga
     3181 tcggatcggt gacccagatg gggacgatcc ggctgggcaa gcgcaccgac aagcgtgccc
     3241 cgctgatccg cgatttcgcc ccgcttgcag cgctggacga tctcgtgttc ggtgcctggg
     3301 acccggtgcc ggacgacgca tacaccgcag ccctccaggc cggcgttctg gaccgccacg
     3361 aacacatcga gcccatcgcg cactttctca aaggcatcaa gccgatgccg gcagtcttcg
     3421 accaggctta cgtcaagcgg ctcgaaggca agaacgtcaa acccggaaac agcaaacggg
     3481 agctagcgga agcgttgcgg aaggatattc gcgacttccg gaccaagcac cagtgcaatc
     3541 gactggtgat gatctggtgt gcgtctaccg aaattttcat cagtccggga ccggcgcact
     3601 ggacgctgga ggcgttcgaa aaggcgatcg acagtaatga tcctacc
//
LOCUS       DASRPQ010002002         1154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_239662, whole genome shotgun sequence.
ACCESSION   DASRPQ010002002 DASRPQ010000000
VERSION     DASRPQ010002002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239662"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            640..>1154
                     /locus_tag="VFD73_22710"
     CDS             640..>1154
                     /locus_tag="VFD73_22710"
                     /inference="COORDINATES: protein motif:HMM:NF021541.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2272 domain-containing protein"
                     /protein_id="HZI76788.1"
                     /translation="MVRIASQELARWAKGTLKETDPKVRRVLQDYWKTGAGVSYSEAQ
                     LGDPRFQQDHPWSAAFISWLMRRAGAGDGFKYSSSHATYTKWAKDNREGNSHNPFKAY
                     RTTELAPQVGDIICKRRAGSGATYDNIRAGMKTHCDVVTEVQPGRLVTIGGNVSNSVS
                     QTFPRIDAEGRL"
BASE COUNT          239 a          333 c          372 g          210 t
ORIGIN      
        1 ggccgcatgt ctcgtttcac gcctcgccac ccacgatctg ggcacatcaa agtgccagcc
       61 ctttttaagc cgggagcagt cgggctgtat gccccgatgc gtggaccgca ccactatcgg
      121 cgtcggccag agttcggtcg gtttggcgtt gtgcctgtta tgtcacccgg gtggcgggcg
      181 tatccgacca ccgtcatcga accgacccct gacgcaaacc ctgaaccgga accgagcgga
      241 ttaccctcag agcatatccg ctgggtgcag gactgcctta atcgggtcat ggggctgcgc
      301 ttgccggcac atggcatcat tagccccgct acccggagcg cgatccggag ctttcaggaa
      361 cgccgtggat tgcctaggga cggtctggta ggtcccgaaa ccgagcgcgc gctggccgat
      421 gcatgtcggc aggggaatct ggaaccatta gccacttcag gagcacgcgt cggaagcacc
      481 ggcgtttcgg tcggcaacgc gccattggag gtcggctttg agtgggaggc ggaggcggtt
      541 gctcggcgca gccgtcggcc agcgccgagt ttcgggcgcg tgagtagtcg gccaggaacg
      601 agtccggcag gctttgataa tcaggcgttc cgacaaagaa tggtgcgtat cgccagtcaa
      661 gagctagcgc gttgggcgaa gggcacactg aaggagaccg atcccaaggt ccgaagggtg
      721 ctgcaggatt attggaagac cggcgccgga gtcagctact cagaggctca actcggcgat
      781 cccaggtttc agcaggacca cccctggagc gcggctttta tctcctggct gatgcgccgt
      841 gcgggcgcgg gagatgggtt caagtatagt agctctcacg cgacatatac gaaatgggca
      901 aaagataacc gcgaaggtaa cagccacaac cccttcaagg catatcgcac aaccgaactc
      961 gctccccagg tcggtgacat tatttgtaaa cggcgtgctg ggagcggtgc cacatacgac
     1021 aatattcgag cgggcatgaa gacgcactgc gatgtggtga cagaagtgca gccgggacgg
     1081 ctggtcacaa ttggtggcaa cgtcagcaac tcggtctccc agacattccc gcggatagat
     1141 gccgaaggcc gcct
//
LOCUS       DASRPQ010002003         2708 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2775917, whole genome shotgun sequence.
ACCESSION   DASRPQ010002003 DASRPQ010000000
VERSION     DASRPQ010002003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2708
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2775917"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(240..>2708)
                     /locus_tag="VFD73_22715"
     CDS             complement(240..>2708)
                     /locus_tag="VFD73_22715"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HZI76789.1"
                     /translation="AFVLIFGLLVSIGSLWLVPDAHVGRRPDPAVTVEEVTRLYPVDM
                     QRVIRPTTVAEIADAVRGTAGPISIGGGRYSMGGQTATPGGVQLDLRDFHGVVAFDPK
                     ARIITVHSGTRWREVQQAIDRANLAIKIMQTYNSFTVGGSLSVNAHGRYIGEGPLVRS
                     VRAITLVLADGRVVTATPTENRDLFYGAIGGYGALGVIGDVTLDLAENSRVRRDDVTL
                     KVEEYPALFRAKVRNDTTAVFHNADMYPPAFRRLRAITYRRTQAELTDRGRLHPPDQS
                     SWVHRLAYRIMSSGSAGLWVREHVIDPWVMRGNPVTWRNYEASYDVSELEPSSRSRKT
                     YVLQEYFIPVDSFLVFVPRMRRILQSHRVNAINVSVRHALKDPGTLLAWAPEEMFAFV
                     LYYKQGVTPDDRREVARWTRALIDAALQSGGRYYLPYQPVATREQFARAYPRSAELLA
                     LKRRVDPTGKFTNVLWDLYAPGPDGRPSPVSAARMPAVLPGEAQQQLDSVPGYPREQG
                     AEFLTHPEWDLVYSSQAYARWLTERRRPSGFPYFAAVGTFWRSYLGAWRASQQAFPAD
                     VGTHVMLWVIGMSTAVEYGLKGLYENTVGRLAEADEPLQGTAEEAYAARVTQDYADLI
                     VRKGWYEFDFGSALGTLWSKVPLTGPGMLRKLERRFALTGEYGIKAVYAWLIGLGTKS
                     AYAPDELQRDIVIAGWSDSLAGGVRAEAPELKVTRVLDRGYTLLTIPRYLPFRDALLV
                     MSQHAGQLRIAEISGCDIVTLTGTAPVGWQAPGRADVVTSYRTPAQSGWVRVLLSVPA
                     RDLLDVLAAVRTEGAFHVDHVYDY"
BASE COUNT          483 a          919 c          838 g          468 t
ORIGIN      
        1 gccgctcacc tacttcctgc agattcttcg gggcgtgttg ctcaaaggga tcggtatcga
       61 gcacctctgg ccgcaggcgc tcgtgcttac cggatttgcg gtgggattga tcgtgctcag
      121 cgtgctgcga ttccacaaga ccgtggacta agccgagcgg acggatgcgc aggcaaccgt
      181 cacctcatcc gagccaagcg gtcaccactg aggggagttc gacgactctc gactttcgac
      241 tagtaatcgt aaacatgatc cacgtggaac gcgccctccg ttctgactgc cgctaacaca
      301 tccagcagat ctctcgccgg cacgcttagc aacactcgca cccagccgct ttgcgccggc
      361 gtccgatacg aagtcaccac gtcggctcgg cccggcgcct gccaccccac cggtgccgtg
      421 ccggtcagcg tcacgatgtc gcatccggag atctccgcga tgcggagctg gccggcatgt
      481 tggctcatca cgagcagcgc gtctcgaaac gggagatacc gcggaatcgt gagcagggtg
      541 tatccgcgat ccaagacccg ggtgaccttc agctcgggag cttctgcccg cactcctccc
      601 gccagactgt cggaccagcc ggcgatgacg atatcgcgct gcagctcgtc cggcgcatac
      661 gccgatttgg tcccgaggcc aatgagccag gcatagaccg ccttgatccc gtattcgccg
      721 gtgagcgcaa atctccgctc cagctttcgc agcatgcctg gtcccgtgag cggcaccttg
      781 ctccacaagg tgcctaacgc acttccaaag tcgaactcgt accagccctt tctcacgatg
      841 agatcggcgt agtcctgggt cacccgcgcc gcatacgcct cctccgccgt tccctggagc
      901 ggctcgtcgg cttccgccag tcgcccgacc gtattctcgt acaaaccctt gagtccgtac
      961 tcgacggcgg tgctcatccc tataacccag agcatcacat gggtgcccac gtcagccggg
     1021 aacgcctgct gactcgcacg ccaagcgccc agatagctgc gccagaacgt gccgacggct
     1081 gcaaagtagg gaaagccgct gggccgccga cgctcggtga gccagcgggc gtacgcctgg
     1141 ctgctgtaca ccaggtccca ctccggatgg gtgaggaatt ccgccccctg ttcccgcggg
     1201 tagcccggca cactgtcgag ctgctgctgc gcttcgcccg ggagcaccgc cggcattcgc
     1261 gcggcgctca ccggcgacgg ccggccatcg ggtcccggag cgtacagatc ccagagcacg
     1321 ttggtgaact tgccggtcgg gtccactcgt cgtttgagcg ccaacagctc tgccgagcgc
     1381 ggatacgccc gggcgaactg ctcgcgggtc gcgaccggct gatacggcag gtagtaacgt
     1441 ccgccgctct ggagcgcggc atcgatcagc gcgcgggtcc agcgggccac ctctcggcga
     1501 tcgtccgggg tgacgccctg tttatagtag agcacgaagg cgaacatctc ctcgggcgcc
     1561 caggccagga gcgtcccggg atccttcagc gcgtgacgaa ccgagacatt gatcgcgttc
     1621 acccggtggc tctggagtat gcgcctcatc cgcgggacga agaccagaaa gctgtccact
     1681 ggaatgaagt attcctggag gacgtaggtc ttgcggctcc gggagctggg ctccagctcg
     1741 ctcacgtcgt aactcgcttc gtagttgcgc caggtgaccg gattgcctcg catgacccag
     1801 ggatcgatca cgtgctcccg cacccagagg ccggcgctcc cgctggacat gatgcggtag
     1861 gccagccggt gaacccagga cgactgatcg gggggatgca gccggccacg gtcggtcagc
     1921 tcggcctggg ttcgccgata ggtgatcgca cggagccgcc ggaacgccgg cgggtacatg
     1981 tcggcgttat ggaaaacggc cgtggtatca ttcctgacct tggcccggaa gagcgcagga
     2041 tactcctcga ctttgagcgt tacatcgtcc cgtcgcaccc ggctgttttc cgccaggtcc
     2101 agtgtcacgt cgccgatgac gccaagcgcc ccgtacccgc cgatggcgcc atagaagaga
     2161 tcccggttct cggtcggagt ggcggtaacg acccggccat cggccagcac cagagtgatc
     2221 gcccgaaccg accggaccag cggtccctct ccgatgtagc ggccatgggc attcaccgac
     2281 agcgatccac cgacggtgaa gctgttgtag gtctgcatga tcttgatggc gaggttggcg
     2341 cgatcgatcg cctgctggac ctcgcgccag cgagtccccg aatgcacggt gataatccgt
     2401 gccttgggat cgaacgccac cacgccgtga aagtcgcgca aatcgagctg aacgccgccg
     2461 ggcgtcgcgg tctggccacc catgctgtag cggccaccac caatcgagat cgggccggcc
     2521 gtcccgcgca ccgcatcggc gatctcggcc actgtggtcg gccggatcac gcgttgcatg
     2581 tccacggggt agagccgggt gacttcctcg accgtaacag ccggatcggg ccgccgaccg
     2641 acgtgagcat cggggaccag ccacaagctg ccgatactca ccagcaggcc aaagatcagc
     2701 acgaaggc
//
LOCUS       DASRPQ010002004         1645 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1826675, whole genome shotgun sequence.
ACCESSION   DASRPQ010002004 DASRPQ010000000
VERSION     DASRPQ010002004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1826675"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..345)
                     /locus_tag="VFD73_22720"
     CDS             complement(<1..345)
                     /locus_tag="VFD73_22720"
                     /inference="COORDINATES: protein motif:HMM:NF016311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase N-terminal domain-containing
                     protein"
                     /protein_id="HZI76790.1"
                     /translation="MPTTSGAYRTLVRLGVALAPALGIFHPRVRAGIRARREAGDRLL
                     EWARRQRDPTRPLAWFHAASVGEGLQAESVLNCFRRLRPDCQVVFSHFSPSAEPLARR
                     LSVDAFDFLPYDL"
     gene            592..1341
                     /locus_tag="VFD73_22725"
     CDS             592..1341
                     /locus_tag="VFD73_22725"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family glutamic-type intramembrane
                     protease"
                     /protein_id="HZI76791.1"
                     /translation="MISSALSSYWRDARAPRYSITLAFPLLAAYETLAFALSHADVTQ
                     VRNGADVLLKSLFVALGGRYGLALFGVVVIGGGLALAAHDARRSGGIRIRYLWWMLAE
                     SVAYALVFGMVAGTLTLLLLPRLALIAGGAGAVVLRGQSFAAQLMISLGAGIYEELLF
                     RVVLVSGLAWVALRLFRWSRSAANGFAVITGALIFSAFHYIGPYGEPLRLDSFTFRTI
                     AGLLFSGLYVARGFGITAWTHALYDVFLAVG"
BASE COUNT          265 a          508 c          547 g          325 t
ORIGIN      
        1 caagtcgtag ggcaggaagt cgaaggcatc cacgctgagc cggcgggcca gcggctcggc
       61 cgagggactg aagtggctga agacgacctg acaatcgggg cggagtcggc gaaagcagtt
      121 gagcacgctc tcggcctgca acccttcccc gaccgaggcc gcatggaacc aggcaagggg
      181 acgggtcggg tcgcgctgcc ggcgggccca ttccagcaac cgatctcccg cttcacggcg
      241 ggcgcgaatg ccggcacgga ctctggggtg gaagatcccg agggcgggcg ccagcgccac
      301 tccgaggcgg accagagtcc gataggcgcc cgaagtcgtt ggcatcgcgg cgaaagttgc
      361 cggtcccggc gggaaaagga agagccttga tctccggcgc ggcacaatac tacaattcac
      421 tccggcagta cgtgttccac ctgcaaccga ggaggtgatc cattgtctac agagtcaggg
      481 gtcgcctgcg gccgttagtc aacgctgcat gctaagaccc aggcgacact tggaacctgg
      541 gggggccgcc taaggcggcc ccttttttct tgcccgcact atcggggacc catgatcagc
      601 tccgcccttt cctcctactg gcgcgacgct cgcgcgccgc ggtacagcat cacgctggcc
      661 tttcctttgc tcgctgccta cgagaccctg gccttcgcgc tctctcatgc tgatgtaacg
      721 caggtacgga acggtgccga cgtgctgctc aagagcttgt tcgtggcgct ggggggcaga
      781 tatggtctgg cactctttgg agtcgtggtg atcggtggtg gcctggcgtt ggcggcgcac
      841 gatgcccggc gctccggcgg gattcgcatc cgctatctct ggtggatgct ggccgagtcg
      901 gtggcctacg ctctggtatt cggcatggtg gcgggaactc tgacgctgct cctgctgccc
      961 cggctggcgc taatagccgg cggagccggc gcagtggtgc ttcgagggca aagctttgcc
     1021 gcccaactca tgatctcgct cggtgccggg atctacgagg aactgctctt ccgggtggtt
     1081 ctggtatcgg gcctggcgtg ggtggcgctg cgactgtttc gctggtccag gagcgctgcg
     1141 aacggcttcg cggtgatcac gggcgcgctg atcttttccg cctttcacta catcggtccc
     1201 tatggcgagc cgctgcggct ggactcgttc acctttcgca ccatcgccgg gctcttgttc
     1261 agcggactgt acgtggcgcg cgggtttggc atcacggcgt ggacccatgc gctgtacgat
     1321 gtgtttctcg cggtcgggta ggcgggcggg cggtcaggcg gtaaggcggt caggcggtaa
     1381 gccggtaagg cggtaagaac ctcatcctga gcgtagcgcg aagctagtct gcaaactttc
     1441 aaaaacccag aagctctccg tggttcgctt gcgctgactc tgtatgagtt aacatccgcg
     1501 accgcccgac cgcctgaccg catgtccgcc cgttttcact cgatataccg aatccagcac
     1561 ctgccggaat accgcgactg gctgtgctcc ctccagcagt cctccttcga tatagaacgt
     1621 cggcgtgctg ttggcgccgg aacga
//
LOCUS       DASRPQ010002005         1690 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3401808, whole genome shotgun sequence.
ACCESSION   DASRPQ010002005 DASRPQ010000000
VERSION     DASRPQ010002005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3401808"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(569..>1690)
                     /locus_tag="VFD73_22730"
     CDS             complement(569..>1690)
                     /locus_tag="VFD73_22730"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HZI76792.1"
                     /translation="AACSETPTSTNSGTDPAVAAAARPAVAGRFIVTLKDRTNPAGIA
                     REHGVRPDFIYTHALTGFAGRISDAARQGLLRDSRVTRVEPDGIATIVTTETGATWGL
                     DRVDQRSSTLNGTYNYTHTGAGVHAYIIDTGILFAHSEFGGRAVSGYDAVDGGSADDC
                     NGHGTHVSGTVGGATYGIAKSVQLVGVRVLDCNGSGTWSGVIAGIDWVTGNHVAPAVA
                     NMSLGGSANSSVDNAVRNMIASGVATAIAAGNGNFVGIAQDACKSTPARVAEAMTIGA
                     TDKNDRKASWSNYGNCIDWFAPGVGITSAWNTSSTATNTISGTSMATPHTTGVAALYL
                     EANPSATPAQVRDALYANTTQHVVSSSKTANNNLLYTNY"
BASE COUNT          259 a          565 c          538 g          328 t
ORIGIN      
        1 cccagcgcca gtcgcagcac gactatctca tatgcctcga cgagtgcatt cggtgctgat
       61 gccgcttcca gggaggcttc tccttacgca cgaggtgctc gcacccggcg ctggtgactg
      121 ctccggaggg gcgcgtcagc acgaggggag gagaccgccg cattagccac cacacatcgt
      181 tggtagcgga atcggcgggc tccgaccgtc gagtgctgca gcgcccccga ggagcagcac
      241 cagcgccgga tcacctgacc tgtcagttca cacgtacgtt ctatgatgct tcgagtgctt
      301 gactggcttg gcacatgagc gactggcgtg tgcctcctcc gagcactgca gcactcgacg
      361 gtcggagccc gggggcaccg ttcggacgaa ggacactgcg actagagccc ggtctcctcc
      421 cctcgtgctg acgtgctctc cggagccaca gcgccagtcg caggaacttt cgtgacggga
      481 ggcccaaccc ggattacctc tccgtcctct ccgtcctctc cgtcctctcc gcctctccgc
      541 cttctccgcc tctccgcctt ctccgcccct aatagttcgt gtacagcaag ttgttgttag
      601 ccgtcttgga gctgctcacc acgtgctgcg tggtgttggc gtagagcgcg tcccgcacct
      661 gcgcgggcgt ggcagagggg ttggcctcga gatagagcgc ggccactcca gtcgtatgcg
      721 gtgtcgccat cgatgtgcca ctgatggtat tcgtggcggt actgctcgtg ttccaggcgg
      781 aagtgatgcc cacccccgga gcgaaccagt cgatgcagtt gccgtagttg gaccacgacg
      841 ccttgcgatc gttcttgtca gtggcaccga tcgtcatcgc ttccgccacc cgggccggcg
      901 tggatttgca ggcgtcctgc gcgatgccga cgaaatttcc gttgccggct gcgatggcgg
      961 tggccacgcc cgacgcgatc atgttccgca ccgcgttgtc gaccgagcta ttggcgctgc
     1021 cgccgagcga catattggcg accgccggcg caacgtggtt gccggtgacc cagtcgattc
     1081 ccgcaatgac cccactccag gtgccggatc cgttgcagtc gagcacccga accccgacca
     1141 gctgcacact cttggcgatc ccgtaggtcg ctccgccgac ggtgccggac acgtgggtgc
     1201 cgtggccatt gcagtcgtcc gcgctgccgc cgtccaccgc gtcgtatcca ctcaccgctc
     1261 ggccaccgaa ttcgctgtgc gcgaacagaa tgccggtatc gatgatgtac gcatgcaccc
     1321 ccgctccggt atgggtgtag ttgtaggtgc cgttgagcgt tgagctccgc tggtcaaccc
     1381 ggtccaggcc ccaggtggca ccggtctcgg tggtcacgat cgtggcaatg ccgtccggct
     1441 cgacccgggt gacccgactg tcgcgaagga gtccctggcg ggcggcatcg gagatacgac
     1501 cggcgaaacc ggtgagcgca tgggtgtaga tgaagtcagg tcggaccccg tgctcccggg
     1561 cgatgcccgc cgggttcgtg cgatctttga gggtaacgat gaagcgtcca gcgactgccg
     1621 gtctggcggc agccgcgacc gccggatcgg ttcctgagtt ggtcgaagtg ggagtctcac
     1681 tacaggccgc
//
LOCUS       DASRPQ010002006         2032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_857988, whole genome shotgun sequence.
ACCESSION   DASRPQ010002006 DASRPQ010000000
VERSION     DASRPQ010002006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_857988"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..786)
                     /locus_tag="VFD73_22735"
     CDS             complement(<1..786)
                     /locus_tag="VFD73_22735"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HZI76793.1"
                     /translation="MLAIILILTALTVALFALSLLQLRTGGDAVVGRLNQIQTAGQTH
                     DTMARRRRQMKSERLLSVLQALGQQVGSGRKDATAVRMFLIQAGFPDDRAVPVYWATR
                     VSLAVGLPALALFGLPLLGFRGGQVLLAVLYFGAMGWIVPTFYLRRRIKARQKEVQLA
                     LPDMLDMLVVCVEAGLGLNQALVRVADEIEHVSSVMAEQLSMVNLEMRAGTPRDEALK
                     NLADRTGVADIRSLVSMMIQTDRFGTSVADALRVHSDTMRTKRR"
     gene            complement(794..1786)
                     /locus_tag="VFD73_22740"
     CDS             complement(794..1786)
                     /locus_tag="VFD73_22740"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HZI76794.1"
                     /translation="MVGLPPDSVWLPALIAFLVVALGTVSLVFLWEWLQENQRKRKMV
                     DTLRSIANEPLAGVGPGASVFRSAVMQSPWLRPIISRVPQLRDAEFMLQQAGLSWTLQ
                     TLFMLSIGTALGLGTTTLILSRSPLVALVATGIGATLPTMYVRRKRTKRLNAFEEFLP
                     ESIDLVGRALRAGHPLSAGFKMAADDGPEPVASEFRRVFEEQRFGLPLQDSLLAMTDR
                     INLVDVRILVTAILIQREVGGNLAEILDNLSAVVRARFTIRRQIRVYTAQGRMTGYLL
                     SALPIIIFCILYMLNPEYMSILFTDPIGKILVTAAIVMQLLGFLWIRKIIRIEI"
     gene            complement(1780..>2032)
                     /locus_tag="VFD73_22745"
     CDS             complement(1780..>2032)
                     /locus_tag="VFD73_22745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76795.1"
                     /translation="DGSRKVMQLSEIVGMEGDIITMQDIFVYEREGMGQNDKVLGSFK
                     ATGIRPRFSDRLKSYGIDLSSVLFSNPITENGRGGLPRW"
BASE COUNT          428 a          619 c          633 g          352 t
ORIGIN      
        1 gcgacgtttc gttcgcatcg tgtcggaatg cacccggagg gcatcagcga ccgacgttcc
       61 gaaccggtcg gtctgaatca tcatgctgac cagcgagcgg atgtcggcca ccccggtacg
      121 atcggccagg ttcttgagag cttcgtcacg gggggttccc gcgcgcatct ccaggttgac
      181 cattgaaagc tgttcggcca tgaccgagct gacgtgctcg atttcgtcgg ccacccggac
      241 cagcgcctga ttgagtccga ggccggcttc gacgcagacc accagcatgt cgagcatgtc
      301 gggtaaagcg agctggacct ctttctgccg ggccttgatc cggcgccgca ggtaaaatgt
      361 cggtacgatc cagcccatcg cgccaaagta gaggaccgcg aggagcacct ggccgccgcg
      421 gaaccccagc aggggcagac cgaacagggc cagagcggga agtcccactg ccaggctgac
      481 gcgcgtggcc cagtacacgg gaacggctcg atcgtcggga aacccagcct gaatcaggaa
      541 catccgaacc gccgtggcgt ccttccgccc gctgccgact tgctgaccca gtgcctggag
      601 gacactcagc agccgttccg acttcatctg gcggcgccga cgagccatcg tgtcgtgcgt
      661 ctgcccggcc gtctggatct gattcagacg accgaccact gcgtcgccgc cggtgcggag
      721 ctgcagcagg ctcagagcga acaaggcgac cgtcaacgcg gtcagaatga gtatgatggc
      781 gagcatcgat gcctcagatc tcgattcgaa tgatcttccg gatccagagg aagcccagca
      841 actgcatcac gattgctgcg gtgacgagga tctttccaat gggatcggtg aagaggatgg
      901 acatgtactc cggattcagc atgtacagga tgcagaagat gatgatcggc aatgctgaaa
      961 ggagataacc ggtcatcctg ccttgggcgg tgtacacccg gatctgccgg cgaatggtga
     1021 agcgggcccg aaccacggca gacagattgt cgagaatttc cgcgaggttc ccgccgacct
     1081 cccgctgaat caggatggcc gtcacgagaa ttcgcacatc caccagattg atccggtcgg
     1141 tcatagccag cagagaatcc tggagtggca aaccgaagcg ctgctcctcg aatacccggc
     1201 gaaactcaga ggcgaccggt tcggggccgt cgtccgcagc catcttgaag ccggcagaaa
     1261 gtgggtgtcc agcccgaagc gctcggccga ccaagtcgat tgattcgggg aggaactctt
     1321 cgaacgcatt cagacgcttg gtccgcttgc gccgcacgta catggtgggc agcgtggcac
     1381 ctattcccgt agcgaccagc gcgaccagcg gggatcgact caggatcaag gtggtggttc
     1441 ccagtcccag cgccgttcca atggagagca tgaacagcgt ctgcaaagtc caggacaggc
     1501 ctgcttgctg cagcatgaac tccgcgtccc ggagctgagg cacccgtgag atgatcgggc
     1561 gcaaccaggg cgactgcatg acagccgagc ggaagaccga agcgcccggg ccgacgcctg
     1621 ccagcggctc attggcaatg gaccgcaggg tgtcgaccat tttgcgcttg cgctgattct
     1681 cctgcaacca ctcccagagg aaaaccagcg agacggtccc gagcgctacg acgagaaatg
     1741 cgatcagcgc cgggagccag acgctgtcgg gcggcaatcc taccatcggg gtaagcctcc
     1801 ccgaccgttt tcagtgatcg gattggagaa cagaaccgag gagaggtcga tgccgtagct
     1861 cttgagccgg tcggagaacc ggggacggat gccagtggct ttgaagctcc ccagaacctt
     1921 gtcgttctgg cccatgccct cgcgctcgta gacgaaaatg tcctgcatgg tgataatgtc
     1981 gccttccatc ccgacgattt cggacagctg catcactttg cgagaaccat cg
//
LOCUS       DASRPQ010002007         1580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_542308, whole genome shotgun sequence.
ACCESSION   DASRPQ010002007 DASRPQ010000000
VERSION     DASRPQ010002007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_542308"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(39..392)
                     /locus_tag="VFD73_22750"
     CDS             complement(39..392)
                     /locus_tag="VFD73_22750"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HZI76796.1"
                     /translation="MQPTVGRESRKRVSILFIDIVGSTTLAEQLDPEALHQIMDRYFA
                     ACVAAIEDHGGVVEKFIGDAVLAAFGATVTHEDGALRAVRAAADSLSGLRDLSTELAA
                     SHQVSLEARCGICSG"
     gene            complement(475..660)
                     /locus_tag="VFD73_22755"
     CDS             complement(475..660)
                     /locus_tag="VFD73_22755"
                     /inference="COORDINATES: protein motif:HMM:NF045560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aroma-sacti cluster domain-containing protein"
                     /protein_id="HZI76797.1"
                     /translation="MAFDALAALRAAGNPVDLLTEEQRVVLGQLTEAEVAVLNSINDR
                     LDAVSDNEVEGHDIKIV"
     gene            complement(763..1161)
                     /locus_tag="VFD73_22760"
     CDS             complement(763..1161)
                     /locus_tag="VFD73_22760"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI76798.1"
                     /translation="MTGSTARHDSEPEPAVAHGSPGGAPASGGSCHTCGAALPGDSAL
                     GIILRATIPQPIAAAVRSSRRLSARELTVFEFLGAGYDNRSIARELGVSERTVKRHVT
                     VILAKLSLESRLQAGLAALIFSFSAPDGPQ"
     gene            complement(1336..>1580)
                     /locus_tag="VFD73_22765"
     CDS             complement(1336..>1580)
                     /locus_tag="VFD73_22765"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HZI76799.1"
                     /translation="ALLEDDRTQRPRLSARERQVLIAYASGMTLEVAARHIGIKPGTA
                     KTYLDRVKAKYRAIGRPAYTKLELAQRIREDGHEEP"
BASE COUNT          281 a          511 c          488 g          300 t
ORIGIN      
        1 acacggaagt cgccggccgg tgaggtaatc acgatggcct agccagagca gatcccgcac
       61 cgggcttcca ggctgacctg gtgactggcg gccagttcgg tactgagatc acgcagcccg
      121 ctcagtgagt cggcagccgc gcggacggca cgcagcgccc cgtcctcgtg cgtgaccgtc
      181 gcgccgaagg cagccaggac ggcgtctccg atgaacttct cgaccacccc gccatggtct
      241 tcgatagccg cgacgcaagc cgcaaaatag cggtccatga tctgatgcag cgcttcggga
      301 tcgagctgct ccgccagagt agtggatccc actatatcga tgaacagaat cgaaactcgc
      361 ttgcgcgatt cccggccaac agttggttgc acaggatgcc ccgctgattg gtaaatctgg
      421 tcaatgttct gaaggttatc gcgggtcggc aatacgcatc atgcgcgagg tatttcaaac
      481 tattttgatg tcgtgccctt cgacctcgtt gtctgaaaca gcgtccagcc ggtcatttat
      541 ggagtttaga acagccacct ccgcttcggt gagctgcccc agcacgactc gctgctcttc
      601 ggtcagcaga tcgactggat taccagctgc acggagcgca gccagcgcat cgaaggccat
      661 gacccctcct tggagcatcg ggcgtcgcgg cacccagtgc tactcgtagg ttgccactcc
      721 agtgttaccc ggccgattgc cggcgtccac gcgacctttg ggtcattgcg ggccgtcggg
      781 tgcggagaat gaaaaaatca gcgcagcgag cccggcctgc agacgtgact ccagacttag
      841 ctttgcgaga atgacggtca cgtgccgctt tacggtgcgc tcgctgacgc ccaactcgcg
      901 ggcaatggac cgattgtcgt agcccgcccc gaggaactcg aagacggtca actctcgcgc
      961 cgacagtcgc cgggacgacc gcaccgcagc ggcgatcggc tgcgggatcg tcgcccggag
     1021 aatgatcccg agcgcactgt cgccgggcaa ggctgccccg cacgtatgac aactgccccc
     1081 agacgcaggg gcgccgcccg gcgatccgtg cgccacggcg ggctccggct cgctatcgtg
     1141 ccgggcggtg ctgccggtca ctcctcttgt tagtgctgca cggaactcta ctgcgtctgc
     1201 atccatgcac gataactctc atctgcgcgg cgccgttatc gttctgacca gccattatct
     1261 tgatcatccc acggcaggcc agaaacgcac gacccgtaat tgggggacac caagcgctag
     1321 ccggcgctgc ggccgttacg gttcctcgtg accgtcttcc ctgatgcgct gggccagctc
     1381 gagcttggtg tacgcggggc ggccaatggc ccggtatttt gctttgaccc ggtccaggta
     1441 ggtcttggcc gttcctggct tgatgccgat atggcgggcc gctacttcga gcgtcatacc
     1501 cgatgcgtag gcgatgagga cctggcgctc acgggccgac aggcggggcc gctgagtccg
     1561 gtcgtcctcc aggagcgcgg
//
LOCUS       DASRPQ010002008         1183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_240242, whole genome shotgun sequence.
ACCESSION   DASRPQ010002008 DASRPQ010000000
VERSION     DASRPQ010002008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240242"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(817..>1183)
                     /locus_tag="VFD73_22770"
     CDS             complement(817..>1183)
                     /locus_tag="VFD73_22770"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HZI76800.1"
                     /translation="PGAWFQFAVALRPAGQLIGDCAAIPHADDPRQCEIGFTIAPKYQ
                     GHGYGTDAVRLLLGYLFTARGKHRITACCDPRNTASAALLERLGMRREGHLRQSTWAK
                     GEWTDDLVYALLHNEWQSR"
BASE COUNT          201 a          381 c          363 g          238 t
ORIGIN      
        1 ggtcgtggtt gacatattcc ggcgcataca gttcatcggc agtcgcccag ttccccccgt
       61 tccagatctc ctcgaactgg cggcggacca gcagcttgtt gtcgtcggtt gacatcgtcg
      121 ggcctcccct ttcatcgcca gcagaccgga aacggctggt tccctgccat ggatgcctgc
      181 cctaacaggt cttagcggga tccgcctggt cacagtcgtg actatccagg tgttccagtg
      241 gcgggcatac ggagtgagca agggctccag gccggcccgt caggtcgtta ccggtcccag
      301 atccgcccgg cccctccggg cgggacgaca cccttatatg ccctggcgga cgaccggtca
      361 agaccagatc gtggcgctgg tgcgcccatt cggaaattaa tcagtgattt ctggcgctcc
      421 cgattcccgc tagctgcaag cagtctcacg tgtagagact aactgcttgc gcaactcgtt
      481 tccggcgctt cacgtatcgg gaagttagca tcatgttgct catctgccac gtgctgatgt
      541 tcatagcgtt ggcgtctggg acccctatgg cgccgacaga ttcgggctcg tataacacgt
      601 taccgacgat ctcaggtatg ccagtcggcg cctaattatc cgagtagaca acgccctcat
      661 ttcatgcatg aacggatggg aggcgtttcc gcggagacgg cttgtgaaat cgcgcacgaa
      721 gcgtttccgc ggaaacgccg cagacgtgac aggcggggcc gcggcgattc ggcccgacgc
      781 cttgtctgcg gaagatgcgg acaggtgaac tcgttctcat ctggactgcc actcattgtg
      841 tagcagggca tacaccaggt cgtcggtcca ttcgccttta gcccaggtgc tctggcgcag
      901 gtgaccctcc cgccgcatgc ccagccgttc cagcagcgcc gccgacgccg tattccgcgg
      961 gtcgcagcag gcggtgatcc ggtgtttgcc ccgcgcggtg aacaggtagc ccagcagcag
     1021 gcgcacggca tcggtgccgt atccgtgccc ctgatacttc ggggcgatcg tgaaccctat
     1081 ctcgcactgg cgagggtcgt cggcgtgcgg tatggccgcg cagtcgccga tcagctgccc
     1141 ggccgggcgc agcgccaccg cgaactggaa ccatgccccg ggc
//
LOCUS       DASRPQ010002009         1023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3995943, whole genome shotgun sequence.
ACCESSION   DASRPQ010002009 DASRPQ010000000
VERSION     DASRPQ010002009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3995943"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..312)
                     /locus_tag="VFD73_22775"
     CDS             complement(<1..312)
                     /locus_tag="VFD73_22775"
                     /inference="COORDINATES: protein motif:HMM:NF015087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016051 - carbohydrate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate synthase family protein"
                     /protein_id="HZI76801.1"
                     /translation="MIAEAGSCHDGDIEKAYKLIKAAGEAGVDAVKFQFWSDAMLLAT
                     RRRAPEYAAVYKKYQVPEVWLSWLQLACVASGVEFMSTVYLPGDIKFVDQYVKRHKIA
                     SF"
     gene            complement(321..>1023)
                     /locus_tag="VFD73_22780"
     CDS             complement(321..>1023)
                     /locus_tag="VFD73_22780"
                     /inference="COORDINATES: protein motif:HMM:NF014740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HZI76802.1"
                     /translation="AVAYNPVEVLKTNVLGTQNVIEASVACGVRSVVVVSSDKAVEPS
                     NVYGSSKNVAEHLAVSSNVYAVPQGTRVSVVRYGNVAWSRGSVLWTWADQSAQRYLQI
                     TDKRMTRFWLTLDRAVDLIEVALKYAAAGEILAPALHAASMVDIASALVQGDCVINEI
                     GLRPGGEKLHEVLIGTEEASRTHQENGLFFIQPHLPTWGHEKLVYNMATRYSSDMAPR
                     MTQEEIMALLASKPV"
BASE COUNT          206 a          337 c          276 g          204 t
ORIGIN      
        1 gaaggaggcg atcttgtgcc gcttgacgta ctggtcgacg aacttgatgt cccctgggag
       61 atagaccgtg ctcatgaact ccacgccgga ggccacacac gccagctgga gccaggagag
      121 ccagacctcg gggacctggt atttcttgta gaccgcggcg tactcagggg ccctgcgccg
      181 ggtcgcgagg agcatcgcat cgctccagaa ctggaacttc accgcgtcca ccccggcttc
      241 cccagcggcc ttgatcagct tgtacgcttt ctcgatatcc ccatcgtggc aggacccagc
      301 ctctgctatc acgaaagtcc tcatacaggc ttactcgcca acaacgccat aatctcctcc
      361 tgggtcatcc tgggagccat atccgaacta taccgagtgg ccatattgta cacaagcttc
      421 tcatggcccc acgtgggaag gtgcggctgg atgaagaaca gaccgttttc ctgatgcgta
      481 cggctggctt cctcggtgcc gatcaggacc tcgtgtagct tctccccgcc ggggcgcagg
      541 ccgatctcgt tgatcacgca gtcaccctgg acaagggcgc tggcgatatc gaccatcgac
      601 gccgcatgga gcgcgggggc aaggatttcc ccagcggcgg catacttcaa cgccacctca
      661 atgaggtcca cggctcggtc cagcgtcagc cagaaccgcg tcatccgctt gtctgtgatc
      721 tgtagatatc gttgagcaga ctggtcagcc caggtccaca ggacactgcc tcgactccag
      781 gccacattcc cataccgcac cacagacacc cgggtccctt gtggaacagc atacacatta
      841 ctggaaaccg cgaggtgctc tgcgacgttc ttgctgcttc catacacgtt ggagggctcc
      901 accgccttgt cactagacac caccaccacg gaacgtaccc cgcaggccac gctggcttcg
      961 atgacattct gtgtccccag tacgttcgtc ttcaggactt cgacagggtt ataggccaca
     1021 gcg
//
LOCUS       DASRPQ010002010         3823 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2139887, whole genome shotgun sequence.
ACCESSION   DASRPQ010002010 DASRPQ010000000
VERSION     DASRPQ010002010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3823
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2139887"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1736)
                     /locus_tag="VFD73_22785"
     CDS             complement(<1..1736)
                     /locus_tag="VFD73_22785"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HZI76803.1"
                     /translation="MRFSRFFIDRPIFAAVVSIVIFIAGLIAMFGLPISEYPEVVPPS
                     VVVRAIYPGANPRVISEAVATPLEEQINGVENMLYMNSQATSDGVLTLTVTFRVGTDP
                     DLAQVQVQNRVSQALPRLPEEVRQLGVTTVKSSPNFIMVVHLLSPDNRYDVTYLRNYG
                     LLQVKDVLARIPGIGQVQVFGGGDYAMRVWLDPGKVAARGLTATDVVNAIREQNVQVA
                     AGVVGAPPMPSPVDYQLSINARGRLANEQEFGDIILKTGENGEITRLRDVARLELAAG
                     DYALRSLLNGKEAVGIGIFQAPGSNALQLSSTVRATMEELKKNFPQGVEYRIVYDPTI
                     NVRDGIREVVKTLFEAILLVVLVVVLFLQTWRASIIPLVAVPISIVGTFAILLMFGFS
                     INTLSLFGLVLAIGIVVDDAIVVVENVERNIEAGLSPREAAHKAMDEVSRPIIAIGLV
                     LCAVFVPVAFLSGLTGEFYRQFALTFAFSTIISAINSLTLSPALSAILLKPHGAPPDR
                     LTRLIDRGFGWLFRPFNRAFSRGSAGYSSAVNRVLGRKGLVLATYAGLIALTLVGFSK
                     VPKGFVPTQDKQ"
     gene            complement(1742..2974)
                     /locus_tag="VFD73_22790"
     CDS             complement(1742..2974)
                     /locus_tag="VFD73_22790"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HZI76804.1"
                     /translation="MQRQSVKSLGGNMRNRRFAVPGALSVVVLSLGALTLDRKKEPPP
                     PQPLPAVTVAPVEQREISGWDEFTGRLQAVNAVEIRPRVSGSIIRVTFAEGKEVKKGE
                     LLFEIDPRPYRAELARAQAELERARSAAALAKSDLQRAGKLVEAQAISREEYDSRTSA
                     ETQGGATVRAAEAAVQTARLNLEWTQVRSPIDGRVSNALVTPGNLVQAGPPTATLLTT
                     VVSLDPMYLYFDSDEQTFLRYAALAKSTGSNWRNARLPVYLGLANESGFPHEGHLDFV
                     DNQVDPNTGTIRTRAVFSNKNRALTPGLFARVKLVGNQKQNAFLVRDAAIGTDQDRKF
                     VLVLGKGDTLAYRPVVPGRLTDDGLRIVTSGLQPGDKVVVNGLMRVRPGVKVTAIDST
                     MVPDSTRAGSDSSTPASE"
     gene            complement(3143..3469)
                     /locus_tag="VFD73_22795"
     CDS             complement(3143..3469)
                     /locus_tag="VFD73_22795"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI76805.1"
                     /translation="MKSSGAGRSTLTEKQFELIAKALADPRRMQVLEVIAGERECPCS
                     KLRDEFPVSKATISHHIKELVRAGLVEAHREGQYLQCEVRRDVLEAYAAELLRRAGSK
                     VKASVA"
BASE COUNT          711 a         1241 c         1166 g          705 t
ORIGIN      
        1 tactgtttgt cctgagtcgg cacaaacccc ttgggcacct tggagaagcc gacgagcgtc
       61 agcgcgatca gtccggcata ggtggcgagc accagtccct tccggccgag tacccggttc
      121 actgccgaac tgtatccggc cgagcctcgg ctgaacgccc ggttgaatgg ccggaacagc
      181 cagccgaatc cgcggtcgat cagccgggtg agtcggtccg gcggcgcgcc atgcggtttg
      241 agcaggatgg cactcaacgc cggcgacagg gtaagcgagt tgatcgccga gatgatggtg
      301 gagaacgcga aggtgagcgc gaactggcgg tagaactcgc cggtcaggcc gctcaggaac
      361 gccaccggca cgaagaccgc gcagagcacc agcccgatcg cgatgatcgg ccggcttacc
      421 tcgtccattg ccttgtgggc cgcttcccgg ggcgagagcc ccgcttcgat attgcgctcc
      481 acgttctcca ccaccacgat cgcgtcgtcc actacgatgc cgatcgccag caccagcccg
      541 aacaaggaca gggtattgat ggagaaaccg aacatcagca ggatcgcgaa ggtgccgacg
      601 atcgagatcg gtaccgccac cagagggatg atcgaggcgc gccaggtctg gaggaacagc
      661 accaccacca gcaccaccag cagaatcgcc tcaaagagcg tctttaccac ttcgcggatg
      721 ccatcccgca cgttgatggt ggggtcgtag acgatccgat actcgacgcc ctgaggaaag
      781 ttcttcttca gttcttccat ggtcgcgcgg accgtgctgg acagctgcag cgcgttggat
      841 ccgggcgcct ggaagatgcc gatgccgacc gcctctttac cgttgagcag cgatcgcaag
      901 gcgtagtccc ctgccgccag ctcgagccgg gccacgtcgc ggagccgggt gatttccccg
      961 ttctcgccgg tcttgaggat gatgtcgccg aactcctgct cattggccag acggccacgg
     1021 gcgttgatgc tgagctgata gtccaccggc gacggcatcg ggggcgcgcc aacgactccg
     1081 gcggccacct ggacgttctg ctcccggatg gcgttcacca cgtcggtggc ggtgaggccg
     1141 cgggcagcta ccttgcccgg gtcgagccac acccgcatcg cgtagtcgcc accgccgaac
     1201 acctgaacct gtccgatccc aggtatccgg gcgagcacat ccttcacctg caacaagccg
     1261 tagtttcgga gataggtcac atcatatcgg ttgtccggcg agagcaggtg caccaccatg
     1321 atgaagttgg gcgagctctt cacggtggtg acacccagct gacggacctc ttccggcaac
     1381 cggggcagcg cctgactgac ccgattctgc acctgcacct gcgccagatc gggatcggtc
     1441 ccgacgcgga aggtcacggt cagggtgagg acaccgtcgg aggtggcctg ggagttcatg
     1501 tacagcatgt tctccacgcc gttgatctgc tcctctagcg gcgtggcgac tgcctccgag
     1561 atcacccgcg ggttggcgcc ggggtaaatc gcgcgcacca cgaccgaggg cggcaccacc
     1621 tcggggtact cgctgatcgg gagcccgaac atcgcgatca gaccggcgat gaagatgacg
     1681 atcgacacca cggccgcgaa gatgggccgg tcgatgaaga agcgagagaa gcgcatggtg
     1741 attactccga agccggagtg ctggagtcgg atccggcgcg ggtggagtcc ggcaccatgg
     1801 tagaatcaat cgcggtcacc ttgacgcccg gtcgcacccg catcagccca ttcacgacca
     1861 ccttgtcgcc cggctgaagg ccggaggtga cgatgcggag accgtcgtca gtgagccggc
     1921 ccgggacgac gggccgatac gccagcgtat ctcccttccc cagcaccagc acgaacttcc
     1981 ggtcctgatc ggtgccgatc gcggcgtcgc gcaccagaaa ggcgttctgc ttttgattgc
     2041 cgaccagctt gacccgggcg aacagtccgg gcgtcagcgc gcgattctta ttggagaaga
     2101 cagcgcgcgt ccgaatggtg ccggtgttgg gatcgacctg gttgtcgacg aaatcgagat
     2161 gtccctcgtg gggaaagccg gattcgttgg ccagaccgag gtagaccggg agccgcgcat
     2221 tgcgccagtt gctgccggtg ctcttggcca gggcagcgta gcgcaagaac gtctgctcgt
     2281 cactgtcgaa gtacaggtac atcggatcga gcgacacgac cgtagtcagc aacgttgcgg
     2341 tcgggggtcc cgcctgcacc agatttcccg gcgtgaccag ggcgttgctg actcgcccat
     2401 cgatcggtga acgaacctga gtccattcca ggttcaaccg ggctgtctgc accgcggcct
     2461 ccgcggcgcg caccgtggcg ccgccctggg tctcggcact ggtgcggctg tcgtattcct
     2521 cacgcgaaat cgcctgggct tcaaccagct tgccggcgcg ctgcaggtca ctcttggcca
     2581 gggcggccgc ggaccgagcg cgttccagct ctgcctgggc cctcgcgagc tcggcccgat
     2641 agggtcgagg atcgatctcg aagagcagct cgcctttctt cacttctttg ccttcggcga
     2701 acgtcacccg gatgatggac ccggagaccc tgggccggat ctccaccgcg ttgacggcct
     2761 ggagccggcc ggtgaattca tcccaaccgc tgatctcgcg ctgttcgact ggcgcgacag
     2821 tgacggccgg caacggctga ggaggaggtg gctccttctt tcggtcgagc gtcagcgcgc
     2881 cgagggagag aaccaccaca gagagggcac caggtactgc gaatcgccgg ttccgcatgt
     2941 tgcctccgag agatttcact gactgccgtt gcatccgatc taccctttcg tcgtttcgcc
     3001 ccgcccaaat tcgacatcca cctgctcacc tcatcccgct taccgctcac cctctcggct
     3061 ttgttacacg atcggtacaa cagttcgatg accatcgaac tctatgttac taaaagcttc
     3121 cggacctttc ccacagggga attcaggcca cggaagcttt gactttgcta ccagcccgcc
     3181 gcagcagctc ggcggcatac gcctccagca cgtcccgacg gacctcgcac tgaaggtact
     3241 gtccttcgcg atgcgcctcg accagccccg cgcggactaa ttccttgatg tgatgcgaga
     3301 tcgtggcctt ggagacggga aactcgtccc gcagcttgga gcagggacac tcccgctcac
     3361 ccgcgatcac ctcgagcact tgcatccgcc gcggatcggc cagggctttg gcgatcagct
     3421 cgaattgctt ctcggtcagg gtcgaccgtc ccgcgccgct ggatttcacg gttcaatggt
     3481 tatcgaacta tcttcctctt gtcaagagca atacctcacc acggagacac ggagaccgca
     3541 cggaagcgct cgcaaagatc aatcattcac gttaactgag gctggagctt acttcgtcat
     3601 ggaatggttt ggaaccatac gattcctccg cgcatcctcc atgtcttccg tgttcccgtg
     3661 gggaacttgt agtcctagct ggattgacta ttgacagccg ctgcttcaga agccatcgtg
     3721 gactgtcgcg agcatccgaa catgagatgg cgtctctgcg gcgaccattc ctcgcgacct
     3781 gccgttcccc caagcagcac acctgctcac cgtagctcct acg
//
LOCUS       DASRPQ010002011         1233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_858952, whole genome shotgun sequence.
ACCESSION   DASRPQ010002011 DASRPQ010000000
VERSION     DASRPQ010002011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_858952"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /locus_tag="VFD73_22800"
     CDS             complement(<1..240)
                     /locus_tag="VFD73_22800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76806.1"
                     /translation="MRDVERGVEPLHDAELNPPPPDALVQVTVTAETGTVGQLVNVEA
                     AEDRPRFQVLRRVPEAVQYTVVAALPATSGESGSAA"
     gene            complement(280..501)
                     /locus_tag="VFD73_22805"
     CDS             complement(280..501)
                     /locus_tag="VFD73_22805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76807.1"
                     /translation="MRGSRSKRELFAHGDETQPDLGRSGPGGEEGGEQRSEEGQFTTA
                     LYVIESVHGGLVLAMYFHWSVKVYVRVTE"
     gene            541..1188
                     /locus_tag="VFD73_22810"
     CDS             541..1188
                     /locus_tag="VFD73_22810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76808.1"
                     /translation="MRVVAELLDFFIDSTGTPQFGRQWTQEADYSCRSWLSVNPMEME
                     LEGNSQIAVRYTVRTPPAAPARGYHCAVGFSTQPTAGQARGTGLRTAVQIVAAIYVVV
                     GKPAAQGSLKDLTLEYVADARQPGWRAVVVLANPGVMHYRPSGDLDVFDQSGKVVESV
                     KFVPMPVLPGRDQRFLFPLKLASGPGKYTLRARVDLGDSEIQEATALVVAAKDSR"
BASE COUNT          208 a          434 c          360 g          231 t
ORIGIN      
        1 cgccgcggat cccgattccc cgctagtcgc cggcagcgct gccacaaccg tgtactggac
       61 cgcttccggc actctcctga ggacctggaa tctcggcctg tcctccgcgg cctccacatt
      121 taccaattgc ccgacggttc ctgtctctgc cgttaccgtg acctgcacca gcgcgtccgg
      181 aggcggagga ttgagctctg catcgtgcag cggctcgacc cccctctcca cgtccctcac
      241 ccaggtagcc tcgggaaccc agggatacgg aagccgcaac tactcggtca ccctgacgta
      301 caccttgacc gaccagtgga aatacatagc aagaacgagt cccccatgca cactctcgat
      361 cacgtacaac gccgtcgtaa attgaccttc ctcggagcgc tgctcgccgc cctcctcgcc
      421 gccgggaccg cttcggccca ggtcgggttg ggtctcatcc ccatgcgcga agagctcgcg
      481 cttggaccgg gagccgcgca ttccggcgtc ctgaccctga acaacgattc cccagccagg
      541 gtgcgcgtcg tcgccgagct gctcgatttc ttcatcgatt cgacaggcac gccccagttc
      601 ggccggcagt ggacccagga ggccgattat tcctgccgca gctggctgtc cgtcaatccc
      661 atggagatgg agttggaagg caattcgcag atagccgtac ggtacaccgt ccgcactccg
      721 cctgccgccc cggcacgtgg ttaccattgc gccgtcggat tttccaccca gcctaccgcc
      781 ggtcaggcga gaggcaccgg cctgcgcacc gccgttcaga tcgtcgccgc catctacgtg
      841 gtcgtcggca aaccggcggc gcagggatcg ctcaaagatc tgacgctgga atatgtcgcc
      901 gatgccaggc agcccggctg gagggccgtc gtggtcctcg ccaatcccgg cgtcatgcac
      961 taccggccca gcggcgatct ggacgtgttc gaccaatccg gaaaagtggt ggagtccgtc
     1021 aaattcgtgc cgatgcccgt gctccccgga cgcgaccaga gattcctctt tccgttgaag
     1081 cttgcttccg gtcccggaaa gtatacgctg cgcgcgcgcg tggatctcgg cgatagcgag
     1141 attcaggagg ctactgcgct tgtggtcgcc gcgaaagaca gccgctagcg tgatgccggt
     1201 gcgtgtcgcg cggctgctcc tggccatgtg cat
//
LOCUS       DASRPQ010002012         1358 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3996427, whole genome shotgun sequence.
ACCESSION   DASRPQ010002012 DASRPQ010000000
VERSION     DASRPQ010002012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1358
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3996427"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..781)
                     /locus_tag="VFD73_22815"
     CDS             complement(<1..781)
                     /locus_tag="VFD73_22815"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZI76809.1"
                     /translation="MIPSRIVFGLLLVGLAACSGSQPDGIALLGATLIDGSGGPPLRD
                     AALVVRRGHVESIGTRAGFELPKKTTELDLTGRWIIPGLIDAHTHISPAATWAPTRFL
                     AWGVTTVRDVHGSLDAILALRKQENTGTVPGPRIYAAGAMIDGLPTTYDDAIGVSSDR
                     EARKAVDRLVSAGVDFIKVYTHIDPTLLRAIIDEARTFNLSVTGHLGMTDAVTAANAG
                     ISCIEHMTGVPEAASPGRSALVAAHYRGFFPGWTASERSWAD"
     gene            complement(768..>1358)
                     /locus_tag="VFD73_22820"
     CDS             complement(768..>1358)
                     /locus_tag="VFD73_22820"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4440 domain-containing protein"
                     /protein_id="HZI76810.1"
                     /translation="WGIGRRLRLDVSHRPSISWRPSILHRQARSPTFQHLSLTAMRAF
                     ILLLALELVACRSSSRPPAAALSQPDSALTATIVAQLNRAAVDWNRGNLDGFLSDYAP
                     ESTTTFVDGRRARHGIDFIRQNYTHWFAPGARRDSLRFEAVEVRPLNPAYALVTARFV
                     LERGGTTTRSGPFTLVMEHRPDGWKIIHDHSSSDPQ"
BASE COUNT          249 a          415 c          455 g          239 t
ORIGIN      
        1 gatctgccca gctgcgttct gatgcagtcc atccggggaa aaaccctcgg tagtgggccg
       61 ccaccagcgc agaacgcccc ggcgaagctg cttccggcac cccggtcatg tgctcgatgc
      121 aagagattcc ggcgtttgct gccgtgacgg cgtcggtcat tcccaagtgg ccggtcacgc
      181 tcaagttgaa ggtgcgtgcc tcatcgatga tggcccgaag cagcgtaggg tcgatatggg
      241 tgtacacctt gatgaagtcc acgcccgcgc taaccagccg gtccacggct ttgcgtgcct
      301 cccgatcgct gctcacgcca atggcgtcat cgtaggtcgt gggaagacca tcgatcattg
      361 cccccgcggc atagatccga gggcccggaa cggtgcccgt attctcctgc ttgcggaggg
      421 ccaggatggc atcgagggaa ccgtgaacat cgcggaccgt cgtgacaccc caggcgagga
      481 agcgggttgg agcccaggtg gcggcgggag agatgtgcgt gtgggcgtcg atcaggccgg
      541 gaatgatcca gcggccggtg agatccagct ccgtcgtctt cttgggaagt tcgaaccccg
      601 cgcgggtacc gatcgattcc acgtggccgc gccgaacgac cagagcggca tcccgcaacg
      661 gtggaccgcc gcttccgtcg atcagcgtgg cgcccaggag tgcgattccg tcgggctgac
      721 tcccgctgca ggcagccaat ccgaccagca gcagaccaaa gactatccta ctggggatca
      781 ctggatgagt ggtcgtgtat gatcttccaa ccgtcgggcc tgtgttccat caccagggtg
      841 aaggggccac tgcgggtcgt cgttccgccc cgctccagca cgaaacgtgc tgtgaccagg
      901 gcgtatgccg gattcagtgg ccgtacctcg actgcctcga agcggaggct gtcccgccga
      961 gctcccggtg cgaaccagtg ggtgtagttc tgcctgatga agtcgatgcc atgtcgggcc
     1021 cgccggccgt ccacaaacgt cgtggtgctt tcgggagcgt agtcggagag aaatccgtcc
     1081 aggtttcccc ggttccaatc gaccgcggcc cggttcagct gggcgacaat cgtagcggtc
     1141 aacgccgaat caggctggct gagagcagca gccggagggc ggctgctgga ccggcaagcc
     1201 acaagctcga gggccagaag cagaatgaac gcgcgcatgg ctgtgagtga gaggtgctgg
     1261 aaggtgggcg agcgagcttg gcgatgcaag atgctgggcc gccaacttat acttgggcga
     1321 tgactgacgt ccagcctcag ccgtcgaccg atgcccca
//
LOCUS       DASRPQ010002013         1886 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3050120, whole genome shotgun sequence.
ACCESSION   DASRPQ010002013 DASRPQ010000000
VERSION     DASRPQ010002013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1886
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3050120"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1527
                     /locus_tag="VFD73_22825"
     CDS             <1..1527
                     /locus_tag="VFD73_22825"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZI76811.1"
                     /translation="RVYIPKKNGKFRPLGMPTWSDKLVGEVVRLLLEAFYDPQFPDSS
                     HGFRKSRGCHTALREIGNTWTGTTWFIEGDISDCFGSLDHDILLGILAEKIQDNRFLR
                     LIRNMLKAGYLEDWDYRDTLSGVPQGGTVSPVLSNIYLDKLDKFVGQELIPQYTRGAR
                     RRLNPEYARVQSRMRRARTRGDRAAARDLQRQLRTLPRDDPMDPGYRRLKYLRYADDH
                     ILGFIGPKAEAEEIKARLAAFLRETLGLELNQAKTLITHARTQRARFLGYDISVWHCN
                     TRITGGRRAINGKIALKVPPHVVKAQCARYRRHGKPWHRSRLQNLDDYDIVRTYGAEY
                     RGVVNYYLLAHDVWRLGVLRWNALTSLLKTLAAKHRCTVTKMAARHKAKIETSDGLRT
                     CFEARKHREGKPELVARFGGIPLRQNRRAVIRDPAPAPAPYPRKQLIKRLRKRECELC
                     ETGTTVAVHQVTRLKELGKPGPGQPAWAALMAKMRRKTLIVCAACHEYIHASPVANAA
                     "
     gene            1674..>1886
                     /locus_tag="VFD73_22830"
     CDS             1674..>1886
                     /locus_tag="VFD73_22830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76812.1"
                     /translation="MAARHKAKIETSDGMRTCFQARKQRAGKPELVARFGGIPLRRDR
                     RAVIRDPAPAPAAIGRKELIYRLRKRR"
BASE COUNT          408 a          643 c          575 g          260 t
ORIGIN      
        1 cgcgtctaca tcccaaagaa aaatgggaag ttccgcccgc tcggcatgcc gacatggtca
       61 gataaactcg tcggcgaagt cgtccggctg ctgctggaag cgttctacga tccgcagttc
      121 ccggatagct cgcacgggtt ccggaaatcc cggggatgcc acaccgcact gcgggaaata
      181 ggtaacacct ggaccggaac cacctggttt atcgaaggag atatctccga ctgcttcggg
      241 tcgcttgacc acgatatcct tctcgggata ctggcggaga aaatccagga caaccggttt
      301 ctccggctga tacggaacat gttgaaagcc ggatacctcg aagactggga ctatcgtgac
      361 acgctcagcg gagtcccgca aggcggcacg gtttccccgg tcctcagtaa catctacctg
      421 gacaagctcg acaagttcgt cgggcaggaa ctgatcccgc agtacacgcg gggagcgcgt
      481 cgcaggctca accccgaata cgcgagggtg cagagccgga tgagacgcgc gcggacgcgc
      541 ggagaccggg cggcagcccg cgacctgcaa agacagctgc gcacgcttcc ccgtgacgac
      601 ccgatggacc ccggataccg gcgccttaaa tacctgagat acgccgacga tcacatactg
      661 ggattcatcg ggccgaaggc cgaagccgag gagatcaagg ccaggctggc cgcgttcctc
      721 cgggagaccc tcggactgga actcaaccag gccaagaccc tcatcacgca tgcccgcacc
      781 cagcgggcac ggttcctcgg ctatgacatc agcgtctggc actgcaacac gagaatcacc
      841 ggcggccgca gggccatcaa cgggaaaatc gcgctgaaag tgccgccgca cgtggtcaag
      901 gcccagtgcg cccgctaccg gagacacggc aaaccgtggc accggtcccg gctccagaac
      961 ctcgacgact acgacatcgt cagaacctac ggagccgaat atcgcggcgt cgtcaactac
     1021 tacctgctcg cccacgacgt atggcggctg ggcgtcctgc gatggaacgc cctgacctcc
     1081 ctgctgaaaa cgctggcggc caagcaccgc tgcaccgtca ccaagatggc ggcccgccac
     1141 aaggccaaga tcgagaccag tgacggactg cggacctgct tcgaggccag gaagcaccgc
     1201 gagggcaagc cggagctggt agcacgattc ggcgggatcc ccctgcggca gaaccggcgg
     1261 gcggtcatcc gagaccccgc gcctgccccg gcaccctatc cccgcaagca gctgatcaaa
     1321 cggctccgca aacgggaatg cgaactctgc gagaccggca ccacggtggc agtccaccag
     1381 gtcacccgcc tcaaggaact cggaaagccg ggaccgggcc agcccgcgtg ggccgccctc
     1441 atggcgaaaa tgcggcgcaa gacgctcatc gtctgcgcgg cgtgccacga gtacatccac
     1501 gcgtcccccg tcgcgaacgc ggcataaatc gctggaaagc tcagtgcggt gaaagccgca
     1561 cgctgagttt ggagggaggc tgcccggcaa aggcccggct tcatccacta tgaacccggg
     1621 acctcgctgg gcagcccacc ctacccgcca agcaccgttc ctccgtcgcc aagatggcgg
     1681 cccgtcacaa ggccaagatc gagaccagtg acgggatgcg aacctgcttc caggcccgga
     1741 aacagcgcgc gggcaagccg gagctggtag cacgattcgg cgggataccc ctcagacgcg
     1801 accggcgcgc ggtcatccgt gacccggccc cggcccccgc cgccatcggc cgtaaggagt
     1861 tgatctaccg gcttcgcaag cggcga
//
LOCUS       DASRPQ010002014         1259 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2777344, whole genome shotgun sequence.
ACCESSION   DASRPQ010002014 DASRPQ010000000
VERSION     DASRPQ010002014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1259
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2777344"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1259
                     /locus_tag="VFD73_22835"
     CDS             <1..>1259
                     /locus_tag="VFD73_22835"
                     /inference="COORDINATES: protein motif:HMM:NF023726.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3631 domain-containing protein"
                     /protein_id="HZI76813.1"
                     /translation="SLCLQLLSLLSPNPALTSGVTAATLSKRTDSAEIPTFLLDEAQV
                     TLGSRARSKNPTLRGLLVSGFQRGIGYSDSKRERNLFAPKAFAGIGPLPEPLADRSLP
                     IILDPLTRAAKVQRFSAAQAQQEASPIMEQLQNWAKEHLPALQAMRAYPRDKFPSGLS
                     PRKEDMFEPLLKLADALGGVWPDLARKSLMGIFDDQAVRENRAALKLLDDIREAYVHY
                     GRPHRLSTAAMIAYLHTLPNRPYNQEGPITDKAMARILAGFNIHSRSLRFKASFEPTS
                     PHRGYMVQDFVPVWARLLSSEPLFRPDRYPDTEKDAKFFCEELERKHLAELHRSQHEA
                     ERKQIVAAQKLEKAKEKESRKARKPNNDAACSSVATSPQDRIPGEWEGMTEEQRAILA
                     EVRRIQNRPPACAEREMQRVAPSFLRR"
BASE COUNT          268 a          456 c          337 g          198 t
ORIGIN      
        1 gtctctgtgc ctgcaactgc tcagcctgct ctcccccaat ccggcgctca ccagcggtgt
       61 caccgccgcc accctgagca agcgcaccga ctccgccgag attcccacct tcctcctcga
      121 cgaagcccag gtcaccctcg gctcccgcgc ccgctccaag aatcccaccc tgcgtggcct
      181 gctggtcagc ggcttccagc gcggcatcgg ctacagcgac tcgaagcgcg aacgcaacct
      241 cttcgcccct aaagccttcg ccggtatcgg ccccttgccc gaacctctcg ctgaccgctc
      301 tctgcccatt atcctcgatc ctctcaccag ggctgcgaag gtccaacgct tcagcgcagc
      361 ccaggcacag caggaagcca gtcccataat ggaacagtta cagaactggg ccaaagagca
      421 cctcccggcg ctgcaagcca tgagggctta cccgcgagac aagttcccgt ccggcctctc
      481 cccgcgaaag gaggacatgt tcgagcctct cctcaaactc gccgacgccc tcggcggagt
      541 ctggcccgac ctggcccgta agtccctgat gggaatcttc gacgatcagg ccgtgcggga
      601 gaacagggcc gctctcaaac tgctcgacga tatccgcgaa gcctacgtcc actatggacg
      661 cccgcaccgc ctctccaccg ccgccatgat cgcctacctc cacactctcc ccaaccgccc
      721 gtataaccag gaggggccga tcactgacaa ggccatggcc cgcatcctgg ccggcttcaa
      781 catccacagc cgcagcctgc gctttaaagc ctccttcgaa cccacctcac cccatcgcgg
      841 ctacatggtg caggacttcg tgccggtttg ggcccgcctg ctctcgtcgg agccgctctt
      901 ccgccccgac cgctaccccg acacggagaa agacgcaaag ttcttttgtg aggaactcga
      961 acggaagcat ttggccgagt tgcaccgcag ccagcacgaa gccgagcgta agcagatcgt
     1021 agccgcacag aagctggaaa aggcgaagga gaaggagagc aggaaggcga gaaagcccaa
     1081 taacgacgcg gcttgtagca gtgtagcgac atccccgcaa gatcgtatac caggcgagtg
     1141 ggaaggcatg acagaggagc agagagcaat cctggccgag gtgcggagga tacaaaaccg
     1201 gcctccagcc tgcgccgagc gcgaaatgca gcgggtcgcc ccatcatttt tgaggagat
//
LOCUS       DASRPQ010002015         2336 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3403156, whole genome shotgun sequence.
ACCESSION   DASRPQ010002015 DASRPQ010000000
VERSION     DASRPQ010002015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2336
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3403156"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1044
                     /locus_tag="VFD73_22840"
     CDS             <1..1044
                     /locus_tag="VFD73_22840"
                     /inference="COORDINATES: protein motif:HMM:NF020671.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0001514 - selenocysteine incorporation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SelB C-terminal domain-containing protein"
                     /protein_id="HZI76814.1"
                     /translation="RSLDVEVSLAPRAARALTPRSRVRVLLGTAEVMARAFPEAAIQP
                     GETGMARLKLEGALVARAQDRFVLRSYSPVTTIGGGMVLDPFPSRRRSLWLPGLRSPQ
                     PSVRLQSLLQRRPSGIDAAQLPLLLGLPPGVSAEVAQRTQGIRLVGDIWVTSDLIERV
                     GGRALTLLRGYHREHPSSPGMPLETLRHGLGESEAVVDAALASFAKAGRLRQSESVVR
                     LAGFVPRVVGGDAEIDRIVGILSQAHLSPPSVSELERSTGHRDLQPLLRLAAASGRVQ
                     AVERDRYYAREALEQFAGVLNDLGRQGTIQPADVRERLGISRKYLIPLLEWADGQGIT
                     VRQGDHRRLRSKL"
     gene            1179..1616
                     /locus_tag="VFD73_22845"
     CDS             1179..1616
                     /locus_tag="VFD73_22845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HZI76815.1"
                     /translation="MVRLVWPGWWLGLLVGAGSPVAAQANVLPPRVELKENYPNPFFP
                     ATTIPFEISQEVCARGHQPVVSLKIYNVLVQVVAIPTLATGSGERLDSLRLRCGRYRA
                     FWDGRYLDGRREATTGVYYYQLSVDGERFTRKMIAQKKIAAGK"
     gene            1794..>2336
                     /locus_tag="VFD73_22850"
     CDS             1794..>2336
                     /locus_tag="VFD73_22850"
                     /inference="COORDINATES: protein motif:HMM:NF014862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
                     /protein_id="HZI76816.1"
                     /translation="MIRPERLTIKAQEAVRDAGELARARGNPVVNDAHLFSALLSQDE
                     GVVQPLLQKAGLNVTAIRQEVEREIGRFPTQAGGGAEPSLSRELQRVFDRADAEAKKL
                     DDAYVSTEHLLLAMADEKGTTARAVLSAQGVSADDLRRALQEVRGSHRVTDQSPEEKY
                     QALERYTRNLTDEARKGKLDP"
BASE COUNT          413 a          686 c          807 g          430 t
ORIGIN      
        1 cggtcgctgg acgtcgaagt gtcgctggct cctcgggcag cgcgggctct gactccgcgg
       61 agccgcgtgc gcgtgctcct cggtaccgcg gaggtgatgg ctcgggcatt tcccgaggcc
      121 gcgattcaac cgggcgaaac cggtatggct cggctcaagc tggagggcgc gctggtcgca
      181 cgggcgcagg atcggttcgt cttaaggagc tacagtccgg tgaccaccat cggcgggggc
      241 atggtactgg atccgtttcc gtcccggcgg cggagccttt ggcttccggg actgcggtcg
      301 ccgcagccct cggtacggct gcaaagcctg ctgcagcgga ggccgagcgg aatcgacgcc
      361 gcgcagctcc cgctgctact gggacttcct cccggcgtga gcgccgaggt tgcgcagcgg
      421 acccagggga tccgattggt tggcgacatc tgggtgacca gcgatctcat cgagcgcgta
      481 ggcgggcgtg ccctgacgct cctgcgcggc tatcaccgcg agcaccccag cagtcccggg
      541 atgccgctgg aaactctccg gcacggactg ggtgagtccg aggcggtggt cgatgcggcg
      601 ctggccagct tcgccaaagc gggtcgtctt cgacagagcg agagcgtggt gcgcctggcg
      661 gggttcgtcc cgcgagtggt gggcggagac gccgagatcg atcggatcgt gggcattctg
      721 agtcaggcgc atctcagtcc gccctcggtg tccgagctgg agcgctcaac tgggcatcgg
      781 gacctgcagc cgctcctccg gttggccgcg gcaagcgggc gggttcaggc agtggagcgc
      841 gaccggtact atgcccgtga agccctggag cagttcgccg gggtgctcaa cgatctcggc
      901 cgtcagggca ccatccaacc agcagatgtc cgggagcggc tgggcatcag ccggaagtac
      961 ctcatcccgc tgctggagtg ggccgatggg cagggaatca cggtgcggca gggagaccat
     1021 cgacggctca ggagtaagct ctagggctcg ggccgctcgg cttcaccttg actctggtgc
     1081 gccgccttga gaccttcact tgaggtttcc tgccccgcat cccgttcgat cgtggaggtg
     1141 ctatcaccag ttaacagctt gtatgaagag gagcgcccat ggtccgtttg gtttggccgg
     1201 ggtggtggct cgggcttctg gtgggagcag gctccccggt cgcagcacag gccaatgtgc
     1261 tcccgccgcg agtcgagctg aaggagaact acccaaatcc gtttttcccg gcgacgacga
     1321 ttccattcga gatttctcag gaggtatgcg caaggggtca tcagccggtc gtcagcttga
     1381 agatttacaa tgtgctggtg caggtggtcg ctattcccac cctggcgacg gggtcgggtg
     1441 agcgactcga tagccttcgg ctccgctgcg gcagataccg agccttttgg gacggcaggt
     1501 atctcgatgg acggcgggaa gccaccaccg gagtctatta ctaccagctc agcgtcgatg
     1561 gtgagcgatt tacccggaag atgatcgccc aaaagaaaat cgccgccggc aagtgaggta
     1621 atctcaaagg agcagcttct cggctgctcc tttttgtttc cacgatgttc tgccaaaccg
     1681 gcagctttga ccggtataac ccttgccata gcgaagcaca cttctaaggt tcccttatac
     1741 cgacgcttct ggagtgtccg gcgggtcggg tttcgtatat gcgaggcaag caaatgattc
     1801 gaccagagag attgaccata aaggcgcagg aggcggttcg agacgcaggt gagcttgcgc
     1861 gggcgagggg aaatcccgtc gtcaacgatg cccatctgtt ctcggccttg ctgagccagg
     1921 atgaaggagt cgtccagcct ttgctgcaga aggcggggct caatgtgacc gccatccggc
     1981 aggaggtaga gcgggagatc ggccgctttc ctactcaggc gggcgggggc gctgagccca
     2041 gtctgagccg agagctgcag agagtattcg accgggcgga tgccgaggca aagaagctgg
     2101 acgatgccta cgtcagcacc gagcacctgc tactcgccat ggctgacgag aagggaacca
     2161 ctgctcgcgc ggtgctgagt gcccagggtg tttcggctga cgatctccgg cgggcgctgc
     2221 aggaggttcg cgggtctcac agggtgaccg atcagtcccc agaagagaaa tatcaggccc
     2281 tggagcgata cactcgcaac ctcaccgacg aggcgcggaa gggcaaactg gacccg
//
LOCUS       DASRPQ010002016         1265 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4301053, whole genome shotgun sequence.
ACCESSION   DASRPQ010002016 DASRPQ010000000
VERSION     DASRPQ010002016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1265
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4301053"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          224 a          446 c          359 g          236 t
ORIGIN      
        1 gatcgccttg ggccggtgct cgcgcctcca tgcatccgac agcggccatt cgccatggcc
       61 tgtcccctgc acgccaagcc ggaccgggtt cgtgcgccac atctcggaca ggcatgcgcc
      121 aggccaactt actcatccag actgcggcac gcatggggtt ctgccccggt ttggcggtcg
      181 caccccctcc cggtaggacc tggtagctga cgagcggttt agctgggtaa ccggctggat
      241 cccttcctcc actggtgaac cgcgccgttg gggcgcacgt aggagaggcg cggtaccgca
      301 caagcgttcc gtttcccctc cccgctcatc gaacgcagcg tgcggatttc ccgcactacg
      361 ctctccgact ggtttcatcg cgggcatacg acggctggtc acatgagcgt ccaccatgct
      421 cacctccgtc ttggcgtcgc gacacagcct gctcggaagg ttccaggttt cattcagtgg
      481 tttgcaggct cacgccaatc cacacaccgt caccctcttc gacaagcaca ccagaagtca
      541 gggtcctttc ctccaccggc gttacccgac atcaacggtc gtatgaccct gtccgacccc
      601 cgtcagcacc gccgccctgc ggcgacgtcg aggccgctac cctcgtgccc aacggacatc
      661 ccccaattac ccggctcacc tttcgaacat gccgtgccca ttaccccgat ggaccgggat
      721 gggtgcgtct gtcggttgct accccatccc acacgggcct tccccgttat tcaggcgggt
      781 cggcgtccat cacttcactt tcgaggcctg ctcagacttc actcgcgtta cggcctgctg
      841 gattgctcaa ccgcctatgc ggcctttgtc acgaggcttc gatccggccg gttacccagc
      901 taaaccgctc gtcagctacc aggtcctacc gacaacttcc tgggtggatc cttcctccac
      961 tggtgaaccg cgccgttggg gcgcactgaa taaatcgggt tagcttgtgg aaagtcgctt
     1021 acgccccggc cctccggccg gagcctagtc acgatcgaga ttgagaaccg ccgcgaaaaa
     1081 agggcggcca atgcaccagg ccgcccgtaa gtcgaggagt tggaaatgcc gtgctcagcc
     1141 caggagcgcg gcaggcggag cgtagcaccg ccgcagagaa aagtgagaaa agggcggcta
     1201 ggagttgctt cgcgccagcc gccccaaggt caggggaatg ccgcgcccaa ctgagcagcg
     1261 cggca
//
LOCUS       DASRPQ010002017         1111 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2421423, whole genome shotgun sequence.
ACCESSION   DASRPQ010002017 DASRPQ010000000
VERSION     DASRPQ010002017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1111
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2421423"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..556
                     /locus_tag="VFD73_22855"
     CDS             <1..556
                     /locus_tag="VFD73_22855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76817.1"
                     /translation="DQGEVQDVPLDSRIHVKLSEMSFRLPARGSHTVFYEATSDTLPA
                     WFNILSAMSGAKTESGLNVRILLPHVVYLNQKQSLQREDVAIRRMEFDASAKRARVLL
                     ENTGPRLGRVYQLTVADGHSTSQPAGGFPLLPHQRRWAEIQWEGATAPDRVTIRSARF
                     TIDTTLSSVPASLAADSAASAPRP"
     gene            577..>1111
                     /locus_tag="VFD73_22860"
     CDS             577..>1111
                     /locus_tag="VFD73_22860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76818.1"
                     /translation="MSALRWMGVAGALAVSPQLMVAQTVVELQGGGSSLANGYGATAN
                     FWRQGVDGWIGLGYLDGFRAGAFLRKATSRGDTLGFGNSALLMRLPTDLFTPGYNLLV
                     QGVSYAGSNERSSYLVFGGASSAGIGAPSFQPTSIEQPMGAVFLDYRVEPTLRLSATA
                     IFADQQTILPGVEWQPSP"
BASE COUNT          204 a          349 c          340 g          218 t
ORIGIN      
        1 cgaccaggga gaggtccagg acgttccgct ggatagccgc attcacgtca agctctcgga
       61 gatgagcttt cgtcttcccg ctcgtggcag tcacacggtc ttctacgaag caaccagcga
      121 tactctgccc gcctggttca acatcttgag cgccatgtcc ggcgccaaga cggaaagcgg
      181 actgaatgtc agaattctcc tgccgcatgt ggtgtacctg aatcagaagc agtcgctcca
      241 gcgggaagac gtagcgatcc ggcgaatgga gttcgatgct tccgccaagc gggcgcgtgt
      301 cctcctggag aacactggac ctcgtctcgg acgtgtgtac cagctcaccg tggcagatgg
      361 ccattccacc agtcagccag cgggcggatt ccccctcctg cctcaccagc gtcgctgggc
      421 ggaaatccag tgggaaggcg ccacagctcc tgatcgggtc accatccgca gtgcccgctt
      481 caccatcgat accacccttt catccgttcc ggcgtcactc gccgcggatt ctgcggcgag
      541 cgctccccga ccgtgacatc gggaggtaga agctgggtgt cggcgctgcg atggatgggc
      601 gtcgccggcg ctctcgccgt gtcacctcag ttgatggtgg cgcagacggt agtcgagctt
      661 caaggtggtg gctcttcgct ggcaaacggc tacggcgcca cggcgaactt ttggcgacag
      721 ggggtcgacg gttggatcgg gctggggtat ctggatggct ttcgggctgg ggcattccta
      781 cggaaggcca ccagtcgagg tgacacgcta ggattcggta acagcgcgtt gctcatgcgt
      841 cttcccaccg atctcttcac accaggatac aatctgctgg tccagggagt gagctatgcc
      901 gggagcaacg agcgtagctc atatctcgtc ttcggtggcg ccagctctgc aggaatcgga
      961 gcgccctcgt tccagcccac cagcatcgaa caaccgatgg gcgcggtgtt tctggactac
     1021 cgagtggaac cgacgctgcg cctaagcgcc accgccatct tcgcagatca acagaccatc
     1081 cttcccggcg tggaatggca accgtctccc g
//
LOCUS       DASRPQ010002018         1387 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2778327, whole genome shotgun sequence.
ACCESSION   DASRPQ010002018 DASRPQ010000000
VERSION     DASRPQ010002018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1387
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2778327"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            217..726
                     /locus_tag="VFD73_22865"
     CDS             217..726
                     /locus_tag="VFD73_22865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76819.1"
                     /translation="MPLSTSKHALLQRFIAPSSLDRLTVEFEDGEDAGAFVPPAWFGP
                     EVTQDAAYDRGALARAGVPASEEIPVSNAMLEELLDKLEETSLAAQLARLSPRRVPEE
                     HPADEPAKGAGSEADQPSGSAAGHAHKEGLIAGLAEALDVFQPTKSASDKMAPANLLQ
                     ARVEAGRWR"
     gene            complement(870..1022)
                     /locus_tag="VFD73_22870"
     CDS             complement(870..1022)
                     /locus_tag="VFD73_22870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76820.1"
                     /translation="MAAEPKSEADLIRALAEDLALEILASYSPGDFADADFTSLGGGC
                     RLSGPA"
BASE COUNT          257 a          428 c          437 g          265 t
ORIGIN      
        1 aaggaacaag gcgtagtggg ccgcattgtc gagggctact tcccagctcg gccccgccga
       61 gagcacttcg tgagcatcga gccgagccaa tgctgccttg ttctcgcgcc agccagggag
      121 ggtcctgagg cggaggagcg ggcggagatc ccacgctctc acgctgaggc acttctggcg
      181 gtgtgcgtgg gcaaggtggg ctttgagtgc acaatcatgc cgctcagcac aagcaagcac
      241 gccctccttc aacggttcat tgcgcccagc tcgcttgatc ggctcaccgt cgagtttgag
      301 gacggagagg acgcgggtgc ctttgtcccg ccagcctggt ttggcccgga ggtgacgcag
      361 gatgcagcct acgacagggg agccttggcc cgtgccgggg tgcccgcttc tgaggagatc
      421 ccagtctcga atgcgatgct ggaggagctt cttgataagc tcgaggagac ttcgcttgcc
      481 gctcagctgg cgcgcctgtc cccgcgacga gttccagagg agcaccctgc ggatgagccc
      541 gccaaaggcg ctggttccga ggcggatcag ccttcaggtt cagcagccgg gcatgcccat
      601 aaagagggcc tgatcgccgg tcttgcagag gctctggacg tctttcagcc gaccaagtcg
      661 gcctctgaca agatggcccc agccaacctg ctacaagcta gggtcgaagc aggccgttgg
      721 cggtgacagg agacaccgga caactcgcct cgagcatcgg atgtagacct gccgccggtt
      781 gccatagctt gagggtgtct cagcgttatg tcccggccgc tttctgggcc ttggcgatca
      841 gctcctgaag cacaggccct ggtcctggct catgctgggc cagatagacg gcagcctccc
      901 cccaagctcg tgaagtcggc gtcggcaaag tccccgggcg agtaggaggc caggatttcg
      961 agcgcgaggt cttcggccag agcccggatc agatcagctt cggatttggg ctcggctgcc
     1021 atgatcatct gccctgcacg tctcaacgct gtgccagccg catgattgcc ccgccccgga
     1081 agtctcgcaa gctctccgtc ccttccgcag tcccttccgc cctgcgatcg atcgtgccgg
     1141 aaccagcgtc gattggggcc tgtgcgtaat cgtactaacc gcgggcagga ttttgctctg
     1201 aacaaagtac atgtctttgt gcgcaagtgg cagccggatc ttgctgacca cataagcaca
     1261 tctatgttag gcagtattca ccacaaaccc cgcggtgatc tgaacaagag cccgtcccca
     1321 cgcgctcgag agtgagggcc cagcaagaga ggaagcgtcc ttagagcctg tttgagtgag
     1381 gaattcc
//
LOCUS       DASRPQ010002019         1303 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4301628, whole genome shotgun sequence.
ACCESSION   DASRPQ010002019 DASRPQ010000000
VERSION     DASRPQ010002019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4301628"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1051
                     /locus_tag="VFD73_22875"
     CDS             <1..1051
                     /locus_tag="VFD73_22875"
                     /inference="COORDINATES: protein motif:HMM:NF015013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HZI76821.1"
                     /translation="IAFGRSHGGYRLAEYAAWGSVLGSGLQFGVQLPVVFQLLRGLAL
                     TLDRGSQAVRTVLRNFGPVFIGRGVVQISAYVDTVLASFLPTGAVAALAYAQVVYTLP
                     VSLFGMSVSAAELPAMSSATGEGSERAAALRDRLGGGLRQIAFFVVPSAVAFLALGDV
                     ITGALYQSGAFTRAMTLYVWGILAGSAVGLLASTLGRLYASTFYALQDTRTPLRFAVI
                     RVGLTIVLGYLFAIPLPGALGLDHRWGAAGLTVSAGLAGWVEFVLLRRALNRRIGRTG
                     LPPALLARLWAGAVGAGLAGAAVKLMLETQPPIVVALFSLGMYGIAYFGITAQLGVTE
                     ARQMLTNLSWRRKGR"
     gene            1076..>1303
                     /locus_tag="VFD73_22880"
     CDS             1076..>1303
                     /locus_tag="VFD73_22880"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HZI76822.1"
                     /translation="MTTPAIPETLQRKLDTLPEGPGVYLWKAKDGEVLYVGKAKRLRS
                     RVRSYFATDFPDSPRNRLLQRLIFDVETIVVP"
BASE COUNT          185 a          424 c          423 g          271 t
ORIGIN      
        1 gatcgccttc ggtcggagcc acggaggcta tcgactcgcc gagtatgccg cgtggggctc
       61 ggtgctggga agcggtctgc agtttggggt ccagcttccg gtcgtgttcc agttgctgcg
      121 cggtctggcc ctgacgctgg atcggggatc ccaggccgtc cgcaccgtgc tccgaaactt
      181 cgggccggtc ttcatcggtc gcggtgtcgt ccagatcagc gcctatgtcg acacggtact
      241 ggcgagcttc ttaccgaccg gagcagtcgc cgcgctcgcc tatgctcaag tcgtctacac
      301 ccttccggtg agtcttttcg gcatgtcggt ctcggccgcg gaactgccgg ccatgtccag
      361 cgccaccgga gagggaagcg agcgtgcggc agcacttcgg gaccggttgg gcggcggtct
      421 caggcagatt gccttctttg tggttccgtc tgccgtggcc ttcctggctc ttggagatgt
      481 catcaccgga gcgctgtacc agtcgggcgc cttcaccaga gcaatgacgc tgtacgtctg
      541 gggcattctg gccggttctg cagtagggct gctcgcctcc acgctcggcc ggctctacgc
      601 ctcgaccttc tatgcactgc aggacacccg cactccgctc cgattcgccg tcatccgcgt
      661 gggactcact atcgtactcg gctacctttt cgccattccg cttccgggcg cactagggct
      721 cgatcaccgc tggggcgcag ccggactcac tgtctctgcc ggcctggcag gttgggtgga
      781 gttcgtgctc cttcggcgtg cgctcaaccg gcgcatcggc cggactggac tgccgccggc
      841 cctcctcgcc cgactttggg ccggagcggt cggtgccggc cttgccgggg ccgctgtcaa
      901 gctgatgctg gagacgcagc cccccatcgt tgtggcgtta ttttccttgg ggatgtacgg
      961 cattgcctac ttcgggatca ctgcgcagct cggcgtgacg gaggccaggc agatgctgac
     1021 gaatctctcg tggcggcgga agggaaggtg acaccgtcgc gaccaggtac tcgctatgac
     1081 tacacctgcc attccggaaa cgctccaacg gaagctcgat acgcttccgg aaggacccgg
     1141 tgtgtacctg tggaaggcca aggacgggga ggtgctgtac gtcggcaagg caaaacggct
     1201 gcgcagccgg gtccggagct acttcgccac cgattttccc gatagccccc gcaatcgcct
     1261 gctgcagcgg ctgatcttcg acgtcgagac catcgtggtc ccg
//
LOCUS       DASRPQ010002020         1538 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4301771, whole genome shotgun sequence.
ACCESSION   DASRPQ010002020 DASRPQ010000000
VERSION     DASRPQ010002020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4301771"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            690..965
                     /locus_tag="VFD73_22885"
     CDS             690..965
                     /locus_tag="VFD73_22885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76823.1"
                     /translation="MRKIEIQPDAALAGVMEEWVAHLLVAIPVGEPGLKFDGDLSNGT
                     VVNHRKPQTWTVSFRRNPGQTDLGHYRNPHAAARAIIEQVHNEEKNN"
     gene            983..1303
                     /locus_tag="VFD73_22890"
     CDS             983..1303
                     /locus_tag="VFD73_22890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76824.1"
                     /translation="MTVVEAMVAEIDGWDDDLRVILPQRSISGTGFWRPTSRSSSGAG
                     LPGPPGTRPVSGYPETRTRILGLTEMQIKDADGTRGISAWVSAAHLLRLRACRLVTGR
                     SHRP"
BASE COUNT          300 a          507 c          469 g          262 t
ORIGIN      
        1 aagcccctcg ggacaggcgt cgtcgtcctg tcctaccagc ccatatacga gaagcggtag
       61 cgtcagcccc gcgccaggtg actggcgcgt gaccgtcgcg ttcagcggca tccgtacttc
      121 ggctacgggc ccaacgacgc gagacacgta agcccgtgca gccggaacgg gagaacctga
      181 gcgcgaccgt ccgcgccacc ggctcaactc cccggccgcg caaaatcggc atgtacgctg
      241 tcgataccaa cgaccgagct gaattgacta atgtcgccat cgctagcccg atacaggtca
      301 gcgcataaat atttgaacca gtaacatccg gcagatccgg gcgttggtcg gccatcgggc
      361 tgggtgggct gcgctcaaga gcacccgatc cgacgcgggc tgagcccgtc ctgacgccct
      421 agccgagccg ccaatacacc gcccggccaa ggcacaacac atgccgtcac cagccaggct
      481 ccgtgcacac cgtgccgggg cccggctgct tttcgcgccc ggtgatcgcg agcagaatgc
      541 atgcatggac ggcatcatcc ccggtgctgt ggagcaggac ggccatcgtt ggctccaggt
      601 tcggctggcc ggacgcctaa ctgggaggcc cgcagcaggc tagccaagta cgtggggata
      661 ctgatcagcc gccgaggagg gaaacacgca tgaggaagat cgaaatccag cccgatgctg
      721 cgctagctgg cgttatggag gagtgggtag cccaccttct tgtcgccatc ccggtgggcg
      781 aacccggtct caagttcgac ggcgacctga gcaacggcac tgtcgtcaac catcgcaagc
      841 cgcaaacctg gacggtctcg ttccggcgca acccgggcca gacggaccta ggtcactacc
      901 gcaacccgca cgcagctgct cgcgccatca tcgagcaggt ccataacgag gaaaagaaca
      961 actgaatgag ggagctaaat acatgaccgt ggtggaggcc atggtcgcgg agattgacgg
     1021 ctgggatgac gacctgcgcg tcatcctgcc acagcgcagc atttccggta ccgggttctg
     1081 gcgaccaaca agtaggagtt cctccggcgc cggattgccg ggtcctccgg gcacgcggcc
     1141 ggtgtccggc taccccgaaa ctcgtacccg gatcctgggc ctgaccgaaa tgcagatcaa
     1201 ggacgccgac ggcactcggg gcatctcagc ctgggtgtcc gccgctcatc ttctgcgcct
     1261 tcgtgcatgc cgtcttgtaa ccggcaggtc acatcgaccc tgacccacct ggccaaacca
     1321 ggcccggcta gcgttcctcc cggtcacgca ccgctataag cgaacatatt gtctttggct
     1381 cgaacaattt cagatcgccg agtatggcgt ggctgtcggt ggtgtgcacg cgctcgcggg
     1441 cgacacacag atcatccggc tatgtttctt ggtcccgtcg atgctgccgt cgtggttcac
     1501 gctcttgcac agcggtggtc tcagccgcgc tgtactgg
//
LOCUS       DASRPQ010002021         1393 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3707026, whole genome shotgun sequence.
ACCESSION   DASRPQ010002021 DASRPQ010000000
VERSION     DASRPQ010002021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1393
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3707026"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            61..645
                     /locus_tag="VFD73_22895"
     CDS             61..645
                     /locus_tag="VFD73_22895"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HZI76825.1"
                     /translation="MQRVAVGAGRLVNQICLLTLLLLAACGSPGSELPLLPDVGPPDY
                     SLAPGDQVRIITYGEDNLTGEFRVNDSGNISLPLIGTVHAAGLTSSGLEGAVAAALRH
                     GDLVRGPSVAVEVIGYRSIFVLGEVNKPGQYPYQPGMTVLSSIALGGGFTYRAIDDYV
                     AIVRSSEGKTAQGRATPQAFVRPGDVIKVFERQF"
     gene            614..>1393
                     /locus_tag="VFD73_22900"
     CDS             614..>1393
                     /locus_tag="VFD73_22900"
                     /inference="COORDINATES: protein motif:HMM:NF015376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HZI76826.1"
                     /translation="MSSRYSSDSSNRFGLCRAGIAVLSALSLVAAADTPAPGPLHIIG
                     SQASGCLAGAVQLPPVGIGFQTIHPLHSAFWGAPSTISRVEALAARAHSAGLGDLYIE
                     DISRPRGGPMHGGHQSHQLGLDVDVGLDIAPKHSLAGAERESVELPSMVRPDQRGINQ
                     AHWSPQVVTLLRLAANLPEIDRILVNPAIKRQLCQDVQGDRAWLRLIRPWYGHAAHMH
                     IRFRCPSDQHDCLQAAPPPPGDGCDPTLQWWFDQLELPPKPA"
BASE COUNT          242 a          438 c          433 g          280 t
ORIGIN      
        1 ggatggtgta ctggtgtctg attaattcct ggctaatcca tcggaccgca tgatccaggt
       61 atgcaacgcg tcgcagtcgg ggccggtcgc ctggtcaacc agatctgcct cttgacccta
      121 ttgctgctcg cggcatgtgg cagtccgggg agcgagttgc cgctgctgcc cgatgtcgga
      181 ccaccggatt acagtctggc cccaggcgat caggtccgga tcatcaccta tggcgaagat
      241 aacctgactg gcgagttccg ggtcaacgac agtggtaaca tctcactgcc gctcatcggc
      301 acagtgcatg ctgcgggcct tacgtccagc gggttggaag gcgctgtggc agccgccttg
      361 cgtcatggcg acctagtgcg cgggccgtcg gtcgcggttg aggtcatcgg ctatcgttcg
      421 atctttgtcc tgggcgaggt caacaaaccc ggccagtacc cttatcaacc cgggatgacg
      481 gtgctctcat cgattgcgtt gggtggcggc ttcacctatc gggctatcga tgattacgtc
      541 gcaattgttc ggtcaagcga aggcaagacg gcccaaggcc gagccactcc ccaggccttc
      601 gtccggccgg gcgatgtcat caaggtattc gagcgacagt tctaatcgct tcgggctctg
      661 ccgtgcaggt atcgcagtgc tgtctgcgct gagcttggtg gcggccgctg acacacccgc
      721 gccaggaccg ctgcacatca tcggtagcca ggcgtcggga tgccttgcag gtgctgtgca
      781 attgccgcca gtcgggatcg ggttccagac catccacccc ttgcacagcg ccttctgggg
      841 tgccccgtcc accatctctc gagtggaggc gcttgcggca cgggctcact cggcggggct
      901 cggcgatctc tacatagagg acatttccag accacgcgga ggcccaatgc acggcggcca
      961 ccaaagccat cagctggggc tggacgtcga tgttggactg gatattgctc ctaagcattc
     1021 gctggccggc gcagagcgtg agagtgtgga actgcccagc atggtgcggc ccgatcagcg
     1081 tggcataaac caggcgcact ggtcgcccca agtagtgacc ctgttgcgtc tggctgccaa
     1141 cctaccggaa atcgaccgca tcctggtcaa ccccgcgatc aagcgccaac tctgccagga
     1201 tgtgcaaggc gatcgcgcct ggctgcggct gatccgaccg tggtatggcc acgcagcgca
     1261 catgcacatc cggtttcgtt gtccttccga ccaacacgat tgtctgcagg ccgccccgcc
     1321 gccgcccggc gatggttgtg acccaacgtt gcaatggtgg ttcgaccagc ttgagctgcc
     1381 acccaagccg gcg
//
LOCUS       DASRPQ010002022         1450 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3404254, whole genome shotgun sequence.
ACCESSION   DASRPQ010002022 DASRPQ010000000
VERSION     DASRPQ010002022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3404254"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..181
                     /locus_tag="VFD73_22905"
     CDS             <1..181
                     /locus_tag="VFD73_22905"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HZI76827.1"
                     /translation="TLGAGQVIAGWDEGVAGMKVGGRRKLVVPPDLGYGTAGAPPDIP
                     PGATLVFEVELLNVR"
     gene            complement(185..>1450)
                     /locus_tag="VFD73_22910"
     CDS             complement(185..>1450)
                     /locus_tag="VFD73_22910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76828.1"
                     /translation="PSFQPTSIEQPMGAVFLDHRVEPTLRLSATAIFADQQTILPGVE
                     WQPSPDITTGFVVGMGSDRPYAASSLSLRQGGLGVKASYAWNPERFRRAPVPTPNQTE
                     VDRENIMLTYDLTQEFSVGVGRQNFVQDSADSSPPLRATGNTIFAGGRWRNLRLTGGL
                     YDSRSEGVENVSTYAAIGHGITSWLDAEIFVLQSRPTGQPTATTPLVNLRWRLSPRVG
                     LSQQISWHQGRPTILWGANLITPIGEFGADYQIVQQPLQPLNPFRSTLNLTARLQLGS
                     YSTSVGTYLRPDGSIDYSASGSTFLYMGSLGGAAPQQIGPRMSRYVVRGRVRDEAGNP
                     VEGAAVDVGGQLVYTNSSGEFFLRASHPQLFPLAVRTAEFLLPGEWQVVSAPAQVTAA
                     EEEKSAAVDIVLRPAVATPVVPPADEDAP"
BASE COUNT          263 a          435 c          478 g          274 t
ORIGIN      
        1 tactctcggc gcggggcagg tgatcgcggg atgggacgag ggggtggcgg gcatgaaggt
       61 tggcggacgt cggaagctgg tggttccacc ggatctgggc tacggaacgg ctggtgcacc
      121 acccgacatt ccgccgggtg ctaccctggt attcgaggtc gagctcctca acgttcgctg
      181 agtcttacgg ggcatcctcg tcggccgggg ggaccactgg ggtggcaacg gccggccgaa
      241 ggacgatgtc gaccgctgcg cttttctcct cctccgcagc ggtaacctgg gccggcgcgc
      301 tcacgacctg ccattctccc ggtagcagga actcagcggt tcgtaccgcg agcgggaaga
      361 gttgcggatg gctggctctg aggaagaact cgccggacga gttggtgtag accagttgcc
      421 ctcccacgtc gaccgccgcc ccctctaccg gatttcccgc ctcgtctcgc actcttcccc
      481 tcacgacata gcgtgacatc cgcggtccga tctgctgggg cgccgctccg cccagcgatc
      541 ccatgtagag gaaggtgctg cctgaagcgg aatagtcgat cgacccgtcg ggccgcagat
      601 aggtccccac actggtcgaa taacttccca gctgcagcct ggccgtcagg ttgagggtac
      661 ttcgaaatgg gttcaacggc tgcagaggtt gctggacgat ctgatagtcc gccccgaact
      721 caccaattgg tgtgatcagg tttgctcccc agaggatggt ggggcggcct tggtgccatg
      781 aaatctgctg gctcaagccc acccgcggcg agagccgcca tcgcagattc accaacggag
      841 tggtcgcggt cggctggcca gttgggcgac tctgcaggac gaaaatttcc gcatccagcc
      901 aggaggtgat gccgtgacca atagcggcat acgtgctcac attctcgacg ccctcagagc
      961 gtgagtcata tagacctcct gtgagccgca gattgcgcca gcggcccccg gcaaaaatgg
     1021 tattaccggt ggctcggagc gggggactgg aatcagcgga atcctgaacg aagttctggc
     1081 gccccacccc gacagaaaat tcctgagtga ggtcgtaggt gagcatgatg ttttcgcggt
     1141 ccacctcggt ctgattgggc gtgggcaccg gtgctcgacg gaaccgctcg ggattccagg
     1201 cataggacgc cttgactccc agtccgccct gtcgcaggga aagactggag gctgcatacg
     1261 gccggtctga gcccatccca accacaaagc cggtcgtgat atcgggagac ggttgccatt
     1321 ccacgccagg aaggatggtc tgttgatctg cgaagatggc ggtggcgctc aggcgcagcg
     1381 tcggttccac tcggtggtcc agaaacaccg cgcccatcgg ttgttcgatg ctggtgggct
     1441 ggaacgaggg
//
LOCUS       DASRPQ010002023         1140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3404370, whole genome shotgun sequence.
ACCESSION   DASRPQ010002023 DASRPQ010000000
VERSION     DASRPQ010002023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1140
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3404370"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..1083)
                     /locus_tag="VFD73_22915"
     CDS             complement(1..1083)
                     /locus_tag="VFD73_22915"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phosphoacceptor
                     domain -containing protein"
                     /protein_id="HZI76829.1"
                     /translation="METPLYNAAAEPNDLRNQLHRAEQEREQALVIAEDAQATVRRLE
                     REMAKLETALVEVRTEAARLRNLVGHGHAELLETKIARARQLPAPCPAGESTAEHAEE
                     LQVILEELQVTAGNLQAVNDALQAANATLERRVAERTESLNKALGERDALLRSKDLLI
                     REIDYRVRNSLQLISSLLRLQADRHKDPVLRRELGGASARIEAVVRVHSMLHDAGSTE
                     RVQFDRYLQTICSALKVSFKVDGRHRELELEADPLDLPADMAVPLALVVNELVTNAFQ
                     HAFREGQPGTVWVQLAREPDGMHRLTVADDGRGLPKKVDLSGRIGLGLQMVAAMAVQL
                     GAKLSIGHKAGARFTLTLPLLPPRLA"
BASE COUNT          175 a          392 c          363 g          210 t
ORIGIN      
        1 ctacgccagc cgggggggca gcagcggcag agttagagtg aagcgtgcgc cggccttatg
       61 gccgatgctc aacttggcac cgagctgcac cgccatggct gctaccatct gaagccccag
      121 cccgatccgc cccgacaggt ccaccttctt gggcaggccg cgaccgtcgt cggcgacggt
      181 cagcctgtgc atgccgtcag gttcgcgggc gagctggacc cagaccgtcc cgggctgacc
      241 ttctcggaac gcatgctgga aggcgttggt caccagctcg ttcacgacca gcgccaacgg
      301 caccgccatg tccgccggca ggtcgagcgg gtcggcctcc agctccagct cccggtggcg
      361 gccatcgacc ttgaaagaca ccttcagggc ggagcagatc gtctgaagat accggtcgaa
      421 ctggacgcgc tcagtgctgc cggcgtcgtg gagcatggaa tgcacccgaa ccaccgcctc
      481 gatgcgggcg ctggctccgc ccagctcccg gcgcaggacg ggatccttgt gccgatcggc
      541 ctggagccgg agcaagctgg atatgagctg caggctgttg cgcacgcggt agtcgatctc
      601 gcggatcagc agatccttgc tgcgcagcag cgcgtcgcgc tcacccaggg ctttgttcag
      661 gctttccgtg cgttctgcga cccggcgctc cagggtcgca ttggccgcct gcaatgcatc
      721 attgactgct tgcaggttcc cggccgtgac ctggagttcc tccaggatca cctgcagctc
      781 ctcggcatgc tcggccgtgc tctccccagc cggacaaggt gcaggcagct gtcgcgccct
      841 cgcaatcttc gtctccagca attcggcatg gccgtgcccc acgaggttgc gcagccgcgc
      901 cgcctcggtc cgcacctcga ccagggccgt ttccagcttt gccatttccc gctcgaggcg
      961 ccggaccgta gcctgggcgt cttccgcgat gaccagcgcc tgttcgcgtt cctgctcggc
     1021 ccggtgaagt tggttgcgca gatcgtttgg ctccgcggca gcattgtaca atggtgtttc
     1081 cacgactcat ccttggctgg aaggcaacga acggacgccg ggctaccgtg gaagctatag
//
LOCUS       DASRPQ010002024         1364 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_544850, whole genome shotgun sequence.
ACCESSION   DASRPQ010002024 DASRPQ010000000
VERSION     DASRPQ010002024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1364
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_544850"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..693
                     /locus_tag="VFD73_22920"
     CDS             <1..693
                     /locus_tag="VFD73_22920"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI76830.1"
                     /translation="GDVNAMYEWDWPSADRNFKKSLALDPNNANTYHWYNGDFLLTVG
                     RTDEALALARRAKDLDPLSFTINGGVGRALHTAGRQEESAAHLRGLLALDSTFPLVNE
                     WLGTTYLAQGKFADAVPLLQRAADPRYSIAAALLGYALAKSGRRQQAEALRRELMDRQ
                     SREYVVPTSLALINLGLGDTAATFVWLDRAVKVHDPFIIYNFVNEPMFEPLKREPRGA
                     AILREMGLRQTR"
     gene            699..1295
                     /locus_tag="VFD73_22925"
     CDS             699..1295
                     /locus_tag="VFD73_22925"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZI76831.1"
                     /translation="MGHTSIIELYERHALDYDNDRSRFLQEKAWLDRFLDHVPPGGAI
                     LDIGCGMGEPIARYCMDAGMRVTGIDSSPSLIAMCRERFPAGEWLVADMRELALNRRF
                     DGLLAWDSFFHLSAHDQRGMFPRFVRHAKPGAPLMFTSGLTEGERVGTYRGEPLYHAS
                     LDTAEYRQLLSANRFRVERYLANDPDCGEHTVWLAIAT"
BASE COUNT          236 a          414 c          457 g          257 t
ORIGIN      
        1 ggcgacgtga atgcgatgta cgagtgggac tggcccagcg ccgaccggaa cttcaaaaag
       61 tcactggcgc tcgatcccaa caatgccaac acctaccact ggtacaatgg agactttctg
      121 ctgaccgtgg gccgcaccga cgaggcgctc gctttggctc gtcgtgcgaa ggatctggac
      181 ccgctgagct tcaccatcaa cggcggcgtg gggcgcgcgc tgcacactgc ggggcgtcag
      241 gaagagtctg ccgcgcacct ccgcgggctg ttggcgctgg acagtacctt tcctctcgtc
      301 aatgagtggt tagggaccac ttacctggcg cagggcaagt tcgccgatgc cgtgccactg
      361 ctgcagcgcg cagcggatcc gcgctactct attgcggccg cgctgctggg gtacgcgttg
      421 gcaaagtcgg gacgccggca gcaggcggag gcgctgcggc gtgagctcat ggaccggcag
      481 tcgagggagt acgtcgttcc taccagtctg gcgctgatca atctgggatt gggtgatacg
      541 gcggcgacgt tcgtctggct cgaccgcgcg gtgaaggtgc acgacccctt cattatttac
      601 aacttcgtga acgagccgat gtttgagccg ctgaagcgcg agccgcgcgg tgcggcgatc
      661 ctgcgggaga tgggcctgcg tcagacccgc tgagggcgat gggtcataca tcgatcatcg
      721 agctctacga gcggcacgcc ctggattacg ataatgaccg gagccgcttc cttcaggaga
      781 aggcctggct cgaccggttc ctggaccacg tcccaccagg cggagccatt ctggatatcg
      841 gctgcggaat gggtgagccg attgcccgct actgcatgga cgccggcatg cgagtcaccg
      901 ggatcgactc ctccccatcg ttgatcgcca tgtgccgcga gcgctttccc gcgggcgagt
      961 ggctcgtggc tgacatgcgg gagctggcgc tcaatcgtcg gttcgacggg ctcctggcgt
     1021 gggacagctt ctttcatctc agcgcccacg atcagcgggg catgtttccc cgcttcgtcc
     1081 gccatgcgaa gccgggggca ccgctcatgt ttaccagtgg gctgaccgaa ggcgagcggg
     1141 tgggcaccta tcggggcgag ccactctacc atgcgagctt ggataccgcg gagtatcggc
     1201 agctgctgtc cgcgaatcgc ttcagagtcg agcggtacct tgcaaacgat ccggactgtg
     1261 gcgagcacac cgtctggctg gcgattgcca cttgagcctt gaccgcctga gaaaaccaga
     1321 accgccaccg attgctgggt ggcggttcag ggattagggg gcac
//
LOCUS       DASRPQ010002025         8393 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3404557, whole genome shotgun sequence.
ACCESSION   DASRPQ010002025 DASRPQ010000000
VERSION     DASRPQ010002025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8393
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3404557"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..896)
                     /locus_tag="VFD73_22930"
     CDS             complement(3..896)
                     /locus_tag="VFD73_22930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76832.1"
                     /translation="MKKLGLIVLLALSVGGCRSRAELTKALAESKAAEAQKDSLLTEV
                     LETTQFVSDLNSELAKTKAVSEASDGSDRGVPGAQHDREDRKATLAKIQQVIARLNES
                     ETKLNATETRAKNAKIRNERLLAQIATYKQTIEDLKTAAEQQRAENEAIIADQRNQIT
                     NLNGQVDELNVQTASLRDTVVHLTAYKNRVYYAVGTKDELLKSGVVTKEGSKFLFFGG
                     TRLEPARKPNLSAFTEIDKTQTLSIPLPRSDKTYKIVSRQNPEYLAGEVSEKGEVKSV
                     VEIASPEEFWAASKFLILVEN"
     gene            complement(1198..2004)
                     /locus_tag="VFD73_22935"
     CDS             complement(1198..2004)
                     /locus_tag="VFD73_22935"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZI76833.1"
                     /translation="MTSAGLGNETVRPLAVVTGASAGIGKEFCEQLAARGYDLLIVSR
                     DAFRLEELKRMLEKDRGVSVDVFPADLSLDDDVSRLVGVVAALPRLALLVNNAGFGTQ
                     EPLVNASPAQQEAMLRLHTLAPMRLTQAALPLLVARHGGGIINVSSVASFLYAPESVN
                     YCATKAYLTTFSEGLASELVGTGVRIQALCPGFTHSEFHQRMAADVGDRPGWMWLSAR
                     QVVTTSLRNLERGGSVVCIPTLRYKIMVLLLRLMPRRLIGVLTGRRRQRL"
     gene            complement(2019..3254)
                     /locus_tag="VFD73_22940"
     CDS             complement(2019..3254)
                     /locus_tag="VFD73_22940"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HZI76834.1"
                     /translation="MSPARRTHGFRESVIRGMTRLAREYQSINLAQGFPNFAAPAVLK
                     EAAARAIHDNINQYAITWGAQRLREALARKYEQWYGLTVSPEREITVTCGATEGMISS
                     LLAVVNPGDEVVVFEPFYENYGPDTILADAKPVYVPLQPGMPLDLDRLRAAWSPRTRA
                     VIVNTPSNPSGRVLSRPELEAIAELCRRSNALAITDEIYEHIRFEGEHIPIATLPDMQ
                     NRTITISGASKTFSVTGWRIGWILAPAALTDAIRKVHDFLTVGAPAPLQEAVAVGLDV
                     LDADFYRQLAREYRDRRDLLYAALIDAGFRCTPPEGAYYILSDFSALAPLAAQGTLVS
                     DTDFSIWLSREVGVTPVPGSSFFRDRGEGGASLVRFVFCKTDDVLLEAARRLRGLSSG
                     PSNRPLRSAEAATRSGLQS"
     gene            3369..4166
                     /locus_tag="VFD73_22945"
     CDS             3369..4166
                     /locus_tag="VFD73_22945"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: protein motif:HMM:NF039343.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CpsB/CapC family capsule biosynthesis tyrosine
                     phosphatase"
                     /protein_id="HZI76835.1"
                     /translation="MTAQPDRPPVAITDLHSHLIPGVDDGTRTAGESLETLEVLYREG
                     VRAAVTTPHLLLPHLPTAADIDHELDKHRRGFNDLSRWLAGRADLPTLALGQEIWAPD
                     AAALRRVVRRRDVGLPGRFLLVEFGFDLQGNHNDVVREALDAGRQILIAHPERYRYLP
                     GQDPLEVMRGWQELGALLQVNVGSLSGYYEGSSPGSESLAWQMVDRAMIDVLATDHHG
                     SRRRGVSPAEALDKLIARGELALAERAMGEIPGRIARDDLLPSGLPG"
     gene            complement(4149..5372)
                     /locus_tag="VFD73_22950"
     CDS             complement(4149..5372)
                     /locus_tag="VFD73_22950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76836.1"
                     /translation="MFLVELRPGKEELYRSSDELALAIRNGDVDERSRVYHRATAKWI
                     SITLHPQYKAIVAASKEEPSARPARRAWNILGGSAGQALPRHGDPTASATPPVYRWRR
                     PLALAVAGVLLLSGIQLAFSGPRPPWAGHHHPVAMKPRPSAPAVADEPKRTSESELLT
                     LASSKTSWPEPVLDDSFPLDHSRIESGAISLPRAPRLRTKLLRESLTPSVVAGHNAAS
                     MDALFARYNAAHDSAESRLEAGLRVARLTQLFSSSRLSPTGGVVDTRMSLAGAANFIR
                     VFRQQQAAIERAYQDSVTALARRYGWPPKQVRQWYNRPPRKESSTLQLISGGLLASID
                     SILGVLDAQAGAYKIRGSAIAFEDPAAGQTYGALRKRIKDQIDAAVAAGGATSSGPAG
                     LLLQAIGTTTLPRET"
     gene            5793..6395
                     /locus_tag="VFD73_22955"
     CDS             5793..6395
                     /locus_tag="VFD73_22955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HZI76837.1"
                     /translation="MISQQRRIDDQMDPWSAGGSRSGNTGSLLLATLLGVGIGLLAAP
                     QPGSKTRKVLRQRLARLGEDVGEGFEEVQQASSKARKRAKQRLAKLREGAGDEWEDVG
                     ERWERAKSRIRDMDFSEEDESSPFGSILAIAAGVAATYLLTSDRAAPVRSRMQDAAAD
                     VRRRATDQWDRFQRGGMRRSTENSEPKAASTPPDDSTPDA"
     gene            complement(6449..7186)
                     /locus_tag="VFD73_22960"
     CDS             complement(6449..7186)
                     /locus_tag="VFD73_22960"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HZI76838.1"
                     /translation="MRKEPVIRTRVAFFWGPQSRPSRPFLTFLAAAGMAGAVLLTPAL
                     SFSLPDSGAAPHVLPRAFSRVPDAPSSAVDSISLEGEVVSRYDHLPLAEILRRRGDPA
                     VANRIARAIVKEARELQLSPSLLAGMLLTENAKLEPKTVSSRGAVGLMQVMRFHAGVY
                     DCDSDDLLQVEANICHGARVFAGYLKRTRDVRSALLRYNGCVRARATESCRRYPAKVL
                     HQAEEIRHQLLLYLPAEKRGSASSRES"
     gene            complement(7372..8268)
                     /locus_tag="VFD73_22965"
     CDS             complement(7372..8268)
                     /locus_tag="VFD73_22965"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HZI76839.1"
                     /translation="MARYLGAHTVFNGGISMAALRAGNAGMKALQIFTAPPQYYGDKA
                     TMRPDRVQRFHAALETAGIALEHVVVHGAYVLNTATEDETKSARARAGLRKELERATA
                     LGVAGVCFHPGAAISSERRPATRRVAGAITEALEHVPGKTRVWVENTAGAGTTIGRTA
                     EEIGCILEAVPARLRPRTGYGLDTCHLFSSGHDIAKSAAEFKRVLDEFQSVTGEPPSF
                     FHLNDSEGALGSNKDRHVLIGTGKIGREPFRWLLEDQRTKNIPLILETPEQNYDIAED
                     DPSADPYDVAMMELLTSMMPRD"
BASE COUNT         1576 a         2579 c         2681 g         1557 t
ORIGIN      
        1 gatcagttct cgaccagaat caagaacttg gaggcagccc agaattcctc aggcgatgcg
       61 atctcgacga cgctcttgac ctcgcccttc tcagagacct cgccagccag atactccgga
      121 ttctgccggg agacgatttt ataggtcttg tctgagcgcg gcagaggaat ggagagggtc
      181 tgggttttgt cgatctcagt aaacgcggag agattcggct tgcgggcggg ctcgagccgg
      241 gtcccaccaa agaacaggaa cttcgagcct tccttggtga ccacgccgct cttcagcagc
      301 tcgtccttcg tgccgaccgc gtagtagacc cggttcttgt aagcagtcag atgcaccacg
      361 gtatcgcgca gggatgccgt ctgtacgttc agctcgtcga cctggccgtt caggttggtg
      421 atctggtttc gctgatccgc gatgatcgct tcgttctccg cgcgctgctg ttccgccgcg
      481 gtcttcaggt cttcaatggt ttgtttgtag gtagcgattt gggcgagcag gcgctcgttc
      541 cggatcttag cgttcttggc ccgagtctcg gtcgcattaa gcttggtttc gctctcgttc
      601 aaccgggcga tcacctgctg aatcttggcc agcgtcgctt tccggtcttc ccggtcgtgc
      661 tgagcgccag gcaccccgcg atcactcccg tcggaggctt cactcaccgc cttggtcttg
      721 gccagctcac tgttgagatc gctgacgaac tgtgtggtct ccaggacctc agtaagaagg
      781 ctgtccttct gggcctcggc ggccttggat tcagccagtg ctttcgtgag ctccgcccgg
      841 ctgcggcatc cgccgactga caaggcaagc agcacaataa gtccgagctt cttcatcagc
      901 agtctcccgc attcgagatg ggtgagcgca accccgcgca ttcaccctgg ggacagcaag
      961 accagagcca ctcggcaatg gcctggtcgg gcaagccccg catacaggag tatcggatgc
     1021 gacctgctaa gactggacag aaggctggct tgggtccggt gaccgggccg gagatagcgc
     1081 atggtcgccg gcagagctta ccaccagcgc ctgagcctgt cgtcagagtg ctattggcgt
     1141 cggcccacag tgcaaattgt tgcagcggtc ctggggcgcg gggagtgggc catctggtca
     1201 caaccgctgg cgacggcgcc cagtcagcac tcctatcagc cgccgcggca tcaaacgaag
     1261 cagcaatacc atgatcttgt accgcaaggt cggaatgcag acgacggaac ccccgcgctc
     1321 gagatttcgc agtgaagtgg tcaccacctg ccgagcggag agccacatcc aacccggacg
     1381 atctcccaca tccgccgcca tccgctggtg gaattcggaa tgggtaaatc caggacagag
     1441 agcctggatc cgaacaccgg tcccgaccag ctcacttgcc agtccttcac tgaacgtcgt
     1501 gagatatgcc ttggtcgcgc agtagttcac gctttcgggc gcgtagagga aagacgccac
     1561 tgaggacacg ttgatgatgc cgccgccgtg cctggccacg agcaggggga gtgcagcttg
     1621 ggtcagacgc atgggggcca gggtgtgcag ccgaagcatt gcctcttgtt gagcgggact
     1681 ggcattgacc aggggttcct gggtgccgaa tccggcgttg ttgaccagta gggccaaccg
     1741 gggcaacgcg gcgaccacgc ccaccagacg actgacgtca tcatccagcg agaggtccgc
     1801 aggaaacaca tcgaccgaga cccctcgatc cttctccagc atccgcttga gctcctccag
     1861 ccggaatgca tccctcgaga caatgagcag gtcataccct cgcgcggcga gctgctcgca
     1921 gaactctttc ccgatgccgg ccgatgcacc ggtgacgacg gccagcggcc ggacggtttc
     1981 attgccgagt cctgcactgg tcatctttcc gtctctgctc aggactgcag cccgctgcga
     2041 gtagccgcct ccgcggagcg gagcggtctg ttggatgggc cggaagaaag tccgcgcagt
     2101 cggcgggccg cctcgagaag gacgtcatca gtcttgcaga aaacgaagcg caccagcgag
     2161 gcacctcctt ctcctcggtc acgaaagaaa ctggagcccg gaaccggcgt cacgccgacc
     2221 tcgcgcgaga gccagatgga aaagtcggta tcggagacca aagtcccctg tgctgccaat
     2281 ggcgcgagtg ccgaaaaatc ggagaggatg tagtaggcgc cttcgggcgg ggtgcagcga
     2341 aaaccggcat caatcagcgc ggcgtaaagc aggtctctgc gatcccgata ctcccgtgcc
     2401 aactgccggt agaaatccgc gtccagtacg tcgaggccca cagccacggc ttcctgcagc
     2461 ggcgcgggcg cgccgaccgt cagaaaatcg tggacctttc ggatggcatc ggtgagcgca
     2521 gctggtgcga gaatccaccc gatgcgccat ccggtgacgc tgaacgtttt ggaagcgccg
     2581 ctgatggtga tcgtgcgatt ctgcatgtcc ggcagcgtgg cgatcggaat atgctcgccc
     2641 tcgaagcgaa tgtgctcgta gatctcatcg gtgatggcca gggcattgga ccgccggcac
     2701 agctcggcga tagcctccag ctccggccgg ctgagcactc tgccgctggg attgctgggg
     2761 gtattcacga tgacagctcg ggtccgcgga gaccacgctg ctctcagccg atcgaggtcc
     2821 aggggcatcc cgggttgcag tgggacgtag accggcttcg catcagccag gatcgtgtcg
     2881 gggccgtagt tctcgtagaa gggctcaaag accactactt cgtcccccgg gtttaccacg
     2941 gcgagcaggg atgagatcat cccttcagtg gccccgcagg tcacggtgat ttcgcgctcc
     3001 ggagagaccg tgaggccgta ccactgctcg tatttccgag ccagcgcctc ccgcagccgc
     3061 tgcgcgcccc aggtgatggc gtattgattg atattgtcgt gaatcgcgcg ggccgcggct
     3121 tccttcagca ccgcgggcgc ggcaaagttg ggaaatccct gcgccaggtt gatcgactgg
     3181 tactccctgg cgaggcgggt catcccccgg atgaccgatt cccggaagcc gtgggtccga
     3241 cgggccggcg acacaacgcc tccgctgaga atgagagcag ccgagttgct cgcggaaact
     3301 acatcgcccg cggcaaccga aacaaccggc ggttgcggct ggcgcgaccg ttgccttaga
     3361 ctcgcgtcat gaccgcccaa cccgatcggc cgccagttgc gatcaccgat ctgcacagcc
     3421 atctgatccc cggcgtggac gacgggacca gaacggcggg tgaatccttg gagacgctcg
     3481 aggttctata tcgcgaaggc gtccgggcag ccgtaaccac gccgcacctg ctgctccccc
     3541 atctgcccac ggccgcagac atcgaccacg agctggacaa gcaccggaga ggcttcaacg
     3601 atctgtcacg ctggttggcg ggacgcgccg atcttcctac cctggcattg ggccaggaaa
     3661 tctgggctcc cgacgcagcc gccctgcggc gggtcgttcg gcgccgcgac gtcggcttgc
     3721 ccggcaggtt cttactggtg gaattcggtt ttgacctgca gggcaatcac aacgacgtcg
     3781 tccgggaggc gctcgacgcc ggtcgtcaga tcctgatcgc tcatcccgag cgctaccgct
     3841 acttgcctgg gcaagatccc ctggaggtca tgcgagggtg gcaggagttg ggcgccctgc
     3901 tgcaggtcaa cgttggaagc ttgagcggat actacgaggg ttcgagcccg ggatctgagt
     3961 cgctggcgtg gcagatggtc gatcgcgcca tgatcgacgt cttggcaacc gaccatcatg
     4021 gaagtcgccg gcgcggagtc tctccagccg aggccctgga taaactcatc gcccgcggtg
     4081 agctggcgct cgccgaacgg gcgatgggag agatacctgg ccggatagcg cgcgacgatc
     4141 ttctaccctc aggtctcccg gggtagcgtt gtggtgccga tcgcctgcag cagaagacca
     4201 gcggggcccg acgacgttgc gcctcctgcg gcaactgctg catcgatctg atccttgatt
     4261 cgcttgcgca aagctccgta cgtctggccc gccgccggat cttcgaaggc gatggcactt
     4321 cctcgaatct tgtatgcccc cgcctgagca tccaggactc cgaggatgct gtcgatgctg
     4381 gccagcaggc cgccgctgat cagttgcaga gttgaggact ccttcctcgg cgggcggtta
     4441 taccactggc gcacctgctt gggcggccag ccgtaccgtc tggcgagtgc agtgaccgaa
     4501 tcctgatagg cccgctcgat cgccgcctgt tgctggcgaa agacccggat gaaattggcc
     4561 gcccccgcca ggctcatcct cgtatccacc actccgccgg tgggactcag tctcgagctg
     4621 gagaagagtt gcgtcaggcg agcgacccgg aggccagcct ccaaccggct ttcggccgag
     4681 tcgtgcgccg cattatatcg agcaaacagt gcgtccatgg aagctgcatt gtgacctgcc
     4741 actacactcg gggtcagcga ctcacgcagt aacttcgtgc gcagacgagg cgcgcgcgga
     4801 agcgaaatcg ccccggactc gattcgggaa tgatccagcg gaaaggagtc atcgagcacc
     4861 ggttccggcc agctcgtctt ggagctggcc agggtcagca gctcggactc gctggtgcgc
     4921 tttggctcgt ctgctactgc aggagcgctc ggccgcggct tcatcgcaac tggatggtgg
     4981 tgaccggccc agggtggacg cgggccggag aacgcaagct ggattccgga gagaagcagc
     5041 acgccggcca cagcgagggc cagcggacga cgccagcggt acaccggagg cgtcgctgaa
     5101 gcggtgggat cgccatgacg aggtaaggcc tggccggcag accctcccag aatgttccag
     5161 gcccgccgag ccggacgggc gctcggttct tccttggacg cggcgacgat ggccttgtac
     5221 tggggatgca aggtgatgga aatccacttg gcggtcgcgc gatggtacac gcgcgaacgc
     5281 tcgtctacgt cgccgttacg aatggccaag gcgagctcgt cactggagcg gtatagctct
     5341 tccttgccag gccggagttc gacgagaaac atgcgatcac actcgactgg ttcttgggtt
     5401 gcgccggagc tgccaccctg gtaacgggat cgggcggggt gtcctgggcc cgcggagttg
     5461 ctacccttga aagccaattc tgtgcgcagg atgggccacc gcccgccagg tatgtgcgcg
     5521 gagcccctcg aatcgcggta agtctcttta aatcaagaat ttgagagagc atagcgggcc
     5581 ggcgtgccag ccgcccaaac aatggtttcg gatgcaaacc atgaaggcgg gcaatgcaaa
     5641 tcggtgcgtt tttcggcccc ggaaggtgta atgcaagaca tttcgctcgc actcggggtg
     5701 tattagtgtc atctccggga ttcgatcggg caggttcgga attcctgaag tccagccaag
     5761 cagccccctg ccgggcgatg attggagggt tcatgatctc acagcagcgc aggatcgacg
     5821 atcagatgga tccctggtcg gcgggcggca gtcggtccgg caacaccggc tcactgctgc
     5881 tggcaacact cttgggagtg ggtatcggac tcctggcagc gccgcagccg ggtagtaaga
     5941 cgcgaaaggt gttacgccag cgcttggcca gactgggcga agacgtgggt gaaggtttcg
     6001 aggaggtcca gcaggcaagc agcaaggcac gaaaacgggc caagcagcgg ctggccaagc
     6061 tgcgggaggg tgccggggat gaatgggagg acgtcggcga gcgctgggaa cgagccaaga
     6121 gccggatccg ggacatggac ttcagtgaag aggacgagtc cagtccattc ggcagcatcc
     6181 tcgccatcgc cgcaggggtt gcggcaactt atctgttgac cagcgaccgg gcagctccgg
     6241 tgcggtcacg aatgcaggat gccgcggcgg atgtgcggcg gcgagccacc gatcagtggg
     6301 atcggttcca gcgtggtgga atgaggcgga gcaccgaaaa ttcagagcct aaggcggcgt
     6361 ccaccccgcc cgacgatagc actccggatg cctgatgctc gaaacagctc gcaggagcgg
     6421 cccgattcta gggccgcttt ttttgcagct agctttccct ggaagacgca ctgccccgct
     6481 tttcagccgg taggtacagc agcagctgat gtctgatttc ttcagcctga tggagcacct
     6541 ttgcagggta gcgccgacag ctctcagtcg cccgggctct gacgcagccg ttataccgca
     6601 gtagtgccga gcgcacatcc ctcgtccgct tgagataccc tgcgaagacc cgcgcgccat
     6661 gacagatatt ggcttcgacc tgcaggagat catccgaatc gcagtcgtag acgcccgcgt
     6721 ggaatcgcat gacctgcatc agacccacag ctccccggct gctgacggtc ttgggctcga
     6781 gcttggcgtt ttcggtgagc agcatgccgg caagaagact gggagaaagc tgcagctctc
     6841 tcgcctcctt gacgatcgct cgagcgatcc gatttgccac cgcgggatcg ccgcgtcggc
     6901 gtagaatctc cgccagggga aggtgatcgt accgtgaaac gacttctcct tccaggctga
     6961 tgctgtcgac cgcgctgctc ggagcatctg gcactcgact gaatgctcga ggtaggacgt
     7021 ggggagcagc gcccgagtcc ggcaggctga aggagagcgc tggggtgagc aataccgcgc
     7081 cggccatccc ggcagcagcc agaaaggtca gaaacggccg actcggcctg gactgaggac
     7141 cccagaagaa cgctacgcgg gtacgaatga ccggctcctt tcgcatcgct gccaaacccc
     7201 gtgggggcgg cgactacgca agaagcgggc acaggaacct gggggaatcg aatcgcgagc
     7261 gcattgtgat tgcggcagat cgacttggcg gaggccgcct gagagacctg ttcagatcca
     7321 gggcaggatg tggcgcagcc gcttttgctc actccgatgg caaatgtcgg ctcagtccct
     7381 aggcatcatc gaagtgagca gctccatcat cgcgacatcg taagggtcgg ccgacgggtc
     7441 gtcctcggca atgtcgtagt tctgttctgg cgtctcgagg atcaggggaa tgttcttggt
     7501 tcgctggtcc tccagcagcc accggaatgg ctccctgccg atcttcccag ttccgatgag
     7561 cacgtggcga tctttgttgg agccgagtgc cccttcgctg tcgttcaggt gaaagaagga
     7621 agggggttct ccagtgacgg actggaattc gtccagcact cgtttgaact ccgccgccga
     7681 tttcgcgatg tcgtggccgg acgaaaagag atgacaggta tccagaccat aaccggtacg
     7741 cggccggagc cgcgcaggga cggcctccag aatgcatcca atctcctcgg cagtgcggcc
     7801 gatcgtggtg cctgccccag cagtgttctc gacccagacc cgggtcttgc cgggcacgtg
     7861 ctccagcgcc tcagtgatag cccctgccac ccggcgagta gctggacgcc gttcgctact
     7921 gatggcagcg ccaggatgaa agcagacacc ggcaactccc agtgcagtcg cgcgttccag
     7981 ctctttgcga agccccgctc gcgcccgggc tgatttcgtc tcatcctcag tagccgtgtt
     8041 cagtacgtag gccccgtgca ccaccacgtg ctcgagcgca atcccggcgg tttccagagc
     8101 cgcatggaag cgctggaccc gatcgggtcg catagtggcc ttgtcgccgt aatactgggg
     8161 aggcgccgtg aagatctgga gcgccttcat gcccgcgttc cccgcgcgga gcgccgccat
     8221 gctgatcccg ccgttgaaca ccgtgtgggc gcccaggtac ctcgccattt tttcgcccct
     8281 taatcggtga tggtgggcac agattgtgtg gccctctccc atcactgtta ggccttccca
     8341 attcaggagc ctaatgtggc acgaaacaag gatgaagcaa tcaacagcta tat
//
LOCUS       DASRPQ010002026         4850 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2422049, whole genome shotgun sequence.
ACCESSION   DASRPQ010002026 DASRPQ010000000
VERSION     DASRPQ010002026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4850
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2422049"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..884
                     /gene="fbp"
                     /locus_tag="VFD73_22970"
     CDS             <1..884
                     /gene="fbp"
                     /locus_tag="VFD73_22970"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: protein motif:HMM:NF006778.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HZI76840.1"
                     /translation="QELADGGVQGEEQQKLDVFANETIKNCLKHTGRVCAMGSEEDQD
                     IIPVPPEYAAGKYAVLFDPLDGSSNIDVNSAVGTIFSIYRRVSMHGRGTAADVLQPGC
                     KQVAAGYVMYGSSTMLVYTTGQGAHGFTLDPTIGEFLLSHPRIITPRVGKYYSVNESN
                     FGRWDKGMQTAVRGLKGDLGDGVTPKNSRYIGSLVGDFHRNLISGGIFLYPADTKNPR
                     GKLRLLYEASPMAFIAEQAQGSATDGVQRILDILPAELHQRTPLVIGSREDVGYVADM
                     LRRTAARASGPVSQPAL"
     gene            881..2416
                     /locus_tag="VFD73_22975"
     CDS             881..2416
                     /locus_tag="VFD73_22975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HZI76841.1"
                     /translation="MKRVYGPGDWTGNPARDLGQPGEFPFTRGPYPGMYTSRLWTMRQ
                     YAGFGTAQETNRRFRQLLQAGQMGLSTAFDLPTQMGYDSDHPMARGEVGRVGVAIDTV
                     EDLKELFREIPLDRVSTSMTINATAAILLAMYVVAGEEQGVSRKKLTGTVQNDVLKEY
                     VARGTYIYPPGPSLRLMADIVRFVTTEGMSFNPISISGYHMREAGATAVQEVGFTLAN
                     ALEYVGVCLQAGLGIDQFGPRLSFFFASHNDLLEEAAKFRAARRLWARVVRERFQAGD
                     TTARMRFHTQTGGVTLQAQQPLNNVVLVTVQALAAVLGGTQSLHTNGYDEALALPTAE
                     SATLALRTQQILGYESGVAEVVDPLAGSYYVEALTDQIEAGARDLIAQIDDLGGAARA
                     IERGFFQDAIAQSAYQLQKSQESGDRVVVGVNRFTDDSPPLSIELPDFSALESQQCAR
                     LTAVKRERNPGEVTSALAQLEQAARNSGVLMPSIITAVRARATLGEISDTLRAVWGAY
                     RPM"
     gene            2486..2833
                     /locus_tag="VFD73_22980"
     CDS             2486..2833
                     /locus_tag="VFD73_22980"
                     /inference="COORDINATES: protein motif:HMM:TIGR02605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FmdB family zinc ribbon protein"
                     /protein_id="HZI76842.1"
                     /translation="MPTYEYQCPEGHVFEKFQKMTDKPRAKCPVCGKPATRKISGGAG
                     LVFKGSGFYITDYGKDGKGPRKPESEAPAAESKTGGEKKGEASRGATSPSKSDTASSK
                     PAADSSKGKAASE"
     gene            2830..4467
                     /gene="argS"
                     /locus_tag="VFD73_22985"
     CDS             2830..4467
                     /gene="argS"
                     /locus_tag="VFD73_22985"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HZI76843.1"
                     /translation="MSDTLRAELSRVATRLGADGLEFVLERPRDAGHGDLATNLAMVL
                     ARRERANPRKIAERVLEELHLPPQFISKTEIAGPGFINFWLAETELSAAHRRILSEGA
                     DYGRATWGAGLKVNVEFVSANPTGPLHVGHGRGAALGDAIASLLEWSGHNVVREFYVN
                     DAGVQIDKLAQSLWARIREARGYQAGIPDGGYHGEYLRENARSVLESEGPGFAELPED
                     EGVRRARTLVVRMQREEQDRDLAEFGVHFDVISSEQAAYDAGRVERTLQLLSKRGLTY
                     ERDGALWLRTTGFGDDKDRVLRKSDGSLTYLTPDIAYHVDKHERGFDRVIDVWGADHH
                     GYIPRMRAALAALGYPPEFFDVELVQLVRVVRGGEEVKMSKRSGEFVTLRDLYEEVGV
                     DAARFFFLMTKGATPLDFDVDKAKKQTDENPIFYVQMAHARLSGIFRTAGLDSNAISG
                     SLDLNALPAPQDTELLKKLIQFPEMVEKAAREREPHRVTVYLHELATIVHGWYHHTRT
                     VGEPSHIEEARLLLTRAARIVLANALRILGISAPDRM"
     gene            4471..>4850
                     /locus_tag="VFD73_22990"
     CDS             4471..>4850
                     /locus_tag="VFD73_22990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HZI76844.1"
                     /translation="MSLLVVGSIALDSIFTPFGETADALGGSAVYFSVAGSLLHPVQV
                     VGVVGKDYPYHELERLASRGIDWSGVEKADGESFRWKGKYSYDLQSRETLETRLGVFA
                     DFQPRLPDSFRTARFLFLGNIDPDL"
BASE COUNT          921 a         1486 c         1548 g          895 t
ORIGIN      
        1 agcaggaact cgccgatggt ggggtccagg gtgaggaaca gcaaaagctc gatgtttttg
       61 ccaacgaaac catcaagaac tgcctcaagc ataccggcag ggtttgcgcc atgggctcgg
      121 aagaagatca ggacatcatt ccggtgcctc ccgaatacgc tgccggcaag tacgcggtgc
      181 tcttcgatcc gctcgatggc tcgtccaaca tcgatgtgaa ctcggcggtc ggaaccatct
      241 tcagcatcta ccggcgggtg agcatgcacg ggcgcggtac cgcggcggat gtgctgcagc
      301 ctggttgcaa gcaggtggcc gcgggatacg tgatgtacgg ctccagtacg atgctggtct
      361 acaccaccgg ccagggagcg cacgggttca ctctggaccc gaccattggc gaattcctct
      421 tgtctcatcc gagaatcatc acccccagag tgggcaagta ctacagcgta aacgagagca
      481 acttcggtcg ctgggataag gggatgcaga ccgcggtccg tggcctcaag ggagacctgg
      541 gagacggcgt cacgccgaag aacagcaggt acattggttc tctggtaggt gacttccatc
      601 gcaacctgat cagcggcgga atttttctgt acccggcgga caccaagaac ccccggggca
      661 aactgcgcct tctctatgaa gccagcccga tggcgttcat cgccgagcag gcgcaaggct
      721 cggccaccga tggcgtgcag cgcattctgg atatcctgcc cgcggagctg caccagcgta
      781 ctccgctggt gatcggctca cgagaggacg ttggctacgt ggccgacatg ctgcgtcgca
      841 ccgcggcccg ggcgagtggt ccggtctccc agccagcctt gtgaagcggg tttacggccc
      901 gggcgactgg accggcaatc cggcacgcga tctcgggcag ccaggcgaat ttcccttcac
      961 tcgcggacct tatcccggca tgtacaccag ccggctctgg accatgcgcc agtacgccgg
     1021 cttcggcacc gcccaggaga ccaatcgccg ttttcggcaa ctcctgcagg cggggcagat
     1081 gggtctctcg accgccttcg atctgccgac ccagatgggg tacgactccg accacccgat
     1141 ggcgcgcggc gaagtgggcc gggtgggcgt ggcgatcgac acggtagaag acttgaagga
     1201 gctgtttcgg gagattccgc tggaccgggt ctccacctcc atgacgatca acgccaccgc
     1261 ggccatcctg cttgcgatgt acgtcgttgc gggagaagag cagggagttt ctcggaaaaa
     1321 actgacggga acggtgcaga acgacgtgct caaggagtac gttgcccgcg gcacctacat
     1381 ctatcctccc ggtccctccc tccggctcat ggcggacatc gtgcgcttcg ttaccacgga
     1441 gggcatgagc ttcaatccga tctccatcag cgggtaccac atgcgggagg ccggcgcgac
     1501 agcggtccag gaggttggct ttaccttggc caacgcgctg gaatacgtcg gcgtctgcct
     1561 gcaggccgga ttgggcattg atcagttcgg cccgagactg tcgttctttt ttgccagcca
     1621 caacgatctg ctcgaggagg cggcaaaatt tcgggccgct cgtcggttgt gggctcgtgt
     1681 cgtacgagag cgtttccagg ccggtgatac cacagccaga atgcgcttcc acactcagac
     1741 cggtggcgtc acgcttcagg cccagcagcc gctcaacaat gtggtcctgg taacggtaca
     1801 ggcgctcgct gccgtgttgg ggggaaccca atcgctccat accaacggct acgacgaagc
     1861 gctcgcgctt cctaccgcgg aatccgccac gctggcgctt cggacccagc agatcctggg
     1921 ctatgaatcg ggagttgccg aggtcgtcga tcccttggcg ggcagctatt acgtcgaagc
     1981 actcaccgat cagatcgagg caggtgctcg cgatttgata gcccagatcg atgatctggg
     2041 cggagctgcg cgcgccattg agcgggggtt ctttcaggac gcaattgctc aaagcgcgta
     2101 ccaactgcaa aagtctcagg aatccggtga ccgggtcgtc gtcggggtga atcggttcac
     2161 cgacgattcc ccacctctct ccatcgagct gcctgacttt tccgcgttgg agagtcagca
     2221 gtgcgctcgc ctcactgccg tcaagcgaga gcgcaatccc ggcgaagtga cctctgcctt
     2281 ggcgcagctc gagcaggctg ctcgcaactc cggagtactc atgcccagca tcattactgc
     2341 ggtccgcgcc cgggccactc tcggagagat cagcgatacg ctgcgtgctg tgtggggcgc
     2401 ctatcgccct atgtagtctg cttgaacgcc gattgttgct gggctaactt tccgtgctga
     2461 tttcatttat cccacttgag cggccatgcc cacctatgag tatcagtgcc ccgaggggca
     2521 cgtgttcgaa aaattccaga agatgaccga taagccccgg gccaagtgcc cggtgtgcgg
     2581 aaagccggct actcggaaga tttctggagg cgccgggctg gttttcaagg gaagcgggtt
     2641 ctacatcacc gattacggca aggacggcaa gggtccgcgc aagccagaat cggaggctcc
     2701 cgccgccgag tcaaagaccg gcggtgagaa gaagggcgaa gcgagccgag gagcaacctc
     2761 gcctagcaag tcggacaccg cctcaagcaa gccagctgcc gattccagca agggaaaggc
     2821 cgcctccgag tgagcgatac gctgcgcgcc gagctgtcgc gggtagcgac ccgactcggc
     2881 gccgatgggc tggagtttgt gctcgagcgg ccccgcgacg ccggtcacgg cgatctggcc
     2941 acgaacctcg ccatggtgct ggcgcggcgc gagcgggcca atccccggaa gatcgccgaa
     3001 cgggttctgg aggagctcca ccttccaccg cagttcattt ccaagaccga aatcgccgga
     3061 ccaggcttca tcaacttctg gctggcagag accgagctct cagctgccca ccggcggatc
     3121 ctgagcgagg gtgccgatta cgggcgggcc acctggggag cgggcctcaa ggtcaacgtg
     3181 gaatttgtgt cggccaatcc caccggaccc ttgcacgtgg gccatggccg gggcgccgcc
     3241 ctgggcgatg ccatcgcctc gctgctggaa tggtccggtc acaacgtcgt ccgcgagttt
     3301 tacgtcaatg acgccggcgt acagatcgac aagttggccc aaagtctgtg ggcgcggatc
     3361 cgggaagccc gggggtacca agccgggatt cccgacggcg gctatcacgg agaatacctt
     3421 cgcgagaatg cgcgctcggt cctggagagc gaagggcccg gctttgcaga gctcccggag
     3481 gacgaaggcg tgcgccgggc gcgtacgctc gtcgtgcgga tgcagcggga ggagcaggat
     3541 cgggacttgg ccgagttcgg cgttcacttc gatgtcattt cctcggagca ggcagcgtac
     3601 gacgccggac gggtggagcg cacgctgcag ctcctctcca agcgaggcct cacctacgag
     3661 cgggatgggg cgctgtggct tcggaccact ggcttcggtg acgataagga ccgggtgctc
     3721 cggaagagcg acggcagcct gacgtatctc acgcccgata tcgcgtatca cgtcgacaag
     3781 cacgagaggg gtttcgaccg ggtgatcgat gtctggggag ccgaccacca cgggtacatc
     3841 ccccggatgc gggctgcgct cgccgccctg ggctaccctc ctgagttctt cgacgtcgag
     3901 ttggtgcagt tggtgagagt ggtgcgaggg ggcgaagagg tcaaaatgtc gaagcggtcg
     3961 ggtgagttcg tgacgcttcg tgatctgtac gaggaagtgg gagtggatgc ggcccgtttc
     4021 ttcttcctga tgacgaaggg ggcgactccg ctggacttcg acgtcgacaa ggccaagaag
     4081 cagacggacg aaaatcccat cttctacgtt cagatggcgc acgcccggct gagtggcatc
     4141 ttccggaccg cgggactgga ctcaaacgct atctccggca gcttagacct gaacgcactc
     4201 cctgcacctc aggacaccga gctgctcaaa aaactgatcc aatttcccga gatggtagaa
     4261 aaggccgcgc gggaacggga gcctcaccgg gtgacggtct atcttcacga gctcgccacc
     4321 atcgtgcatg gctggtatca ccacacccgc accgtgggcg agcccagcca catcgaagag
     4381 gcccgcctgc tcctgacccg cgctgctcgg attgtgctcg ccaacgccct ccgaatactg
     4441 ggcatctccg cacccgatcg gatgtaacgc atgagccttc tggttgtcgg aagcatcgcg
     4501 ctcgactcga tcttcactcc cttcggggag accgcggatg cgctcggcgg ttccgcggtg
     4561 tacttcagtg ttgccggatc gctgctgcat ccggtccagg tcgttggggt ggtggggaag
     4621 gactacccct accatgaact ggagcggctc gcctcgcgcg gcatcgactg gtccggagtc
     4681 gagaaggccg acggagagag ctttcggtgg aagggcaaat attcctacga tctccagagt
     4741 cgcgaaacgt tggagacccg cctcggcgtg ttcgccgatt ttcagcccag acttcccgac
     4801 tctttccgaa cggcacggtt tctcttcctc ggcaatatcg atcctgatct
//
LOCUS       DASRPQ010002027         1935 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2778900, whole genome shotgun sequence.
ACCESSION   DASRPQ010002027 DASRPQ010000000
VERSION     DASRPQ010002027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1935
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2778900"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..333
                     /locus_tag="VFD73_22995"
     CDS             <1..333
                     /locus_tag="VFD73_22995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76845.1"
                     /translation="ISGKVDKLLGLKENVIIGKLIPAGTGLAARQQARRERLAAQQQL
                     MLEAGPLPAGLLLEDGQPVTLGAPLGEGLAGVGVADRPPTRLEDLEDDDDDEELLDEE
                     EIDLSDDA"
     gene            555..1511
                     /locus_tag="VFD73_23000"
     CDS             555..1511
                     /locus_tag="VFD73_23000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011646078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZI76846.1"
                     /translation="MSEQTCWIGIDISKAELDVAVRPGGVRWQVHHDAAGIDALVERC
                     VALAPQRIVVEATGGFEIGVAAALAAQHLPVVVVNPRQVRDFARATGQLAKTDRLDAA
                     ILAHFGEAIQPDVRPLPDATARALSLLVARRRQLQEMLIAEQHRLLSAAVQDAPVPLR
                     DELGDHIAWLRRRLDQMNDDLNQQIRSSPVWREREDLLRTIGGIGPIVSATLLSHLPE
                     LGQLDRKAIAKLVGVAPLNRDSGSVKGVRHIWGGRAQVRTVLYMAALVATRHNPQIRT
                     FYQRLLAAGKPAKVALVACMRKLLLICNAVLRSHTSWSPASP"
     gene            complement(1676..>1935)
                     /locus_tag="VFD73_23005"
     CDS             complement(1676..>1935)
                     /locus_tag="VFD73_23005"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZI76847.1"
                     /translation="LGDRRIRVNCIAPGQVYTPLIAERLDEAGRQRRATSGLIKDEGS
                     AWDIGWAAVYLASEEARWVTGHVLTVDAGITITIPGNPYGR"
BASE COUNT          352 a          623 c          621 g          339 t
ORIGIN      
        1 atctctggca aggtcgacaa actgctcggc ctgaaagaga acgtcatcat cggcaagctc
       61 atccccgcag ggacgggcct cgctgccagg cagcaggcgc gccgcgagcg gctggccgct
      121 caacagcagc tcatgctcga agctggcccg ctgcccgctg gcttgctgct cgaggacggt
      181 caacccgtca cacttggcgc tccgctaggc gaaggcctgg caggcgtcgg cgtggcagac
      241 cgtccgccga cacgactgga agacctcgag gatgacgacg atgacgagga gctgttagac
      301 gaggaggaga tcgacctctc cgacgacgcc tgacctgacc tctgctttgt atctctaaag
      361 agcgttctac gctggaggag cgccgaccac ggacgggaca ggccgattct gctttggtcc
      421 gcactggccg caagagagcg aggtcgtccc gtccgactcg agcagagccc gaacagttgc
      481 cagggccacc accaggtgag tccgtatcca caaggtcggg ccgacgtcga gaatgcaggc
      541 gcagcagtag ggacgtgtct gagcaaacgt gttggatcgg catcgatatc agcaaagctg
      601 aactggatgt agcggttcgt ccaggtggcg tgcgctggca ggtgcaccat gacgccgcgg
      661 gcatcgatgc gctggtggag cggtgcgtgg cactggcgcc gcagcgcatt gtggtcgagg
      721 cgacgggtgg ctttgagatt ggcgtcgcgg cggcgctggc cgcccagcac ttgccggtgg
      781 tggtcgtcaa tccacgccag gtgcgcgatt ttgcgcgtgc gactggacag ttggccaaga
      841 ccgaccgtct ggatgcagcc atcctggcgc actttggcga ggctatccaa cccgacgtac
      901 ggccgctgcc cgacgccacg gcacgcgcct tgtcgctgct ggtggcgcgc cgtcgacaac
      961 tccaggagat gttgatcgcc gagcagcatc ggttgctgag cgcggcggtg caggatgcgc
     1021 ctgtgcccct acgggatgaa ctcggtgacc acatcgcctg gctacgccga cggctggacc
     1081 agatgaatga cgacctgaac cagcagatcc ggtccagtcc cgtgtggcgc gagcgcgagg
     1141 atctgctgcg cacaattggt ggcattggtc cgatcgtctc ggcgacgctg ttgagccact
     1201 tacccgagct cggccaactc gaccgcaagg ccatcgccaa attggtcggt gtggcacccc
     1261 tcaatcgtga cagtggcagc gtcaaaggcg tccgccacat ctggggcggg cgcgcccagg
     1321 tgcgtacggt gctgtacatg gctgcactgg tcgccacccg ccacaaccca cagattcgga
     1381 ccttctacca acgcctgctc gcggccggca aacccgccaa ggtggcgctg gtggcctgca
     1441 tgcgcaagct cttgctcatc tgcaacgccg tcctccgctc acacacctcc tggagcccag
     1501 ctagcccttg acaaccaaga cagttgctct ctttagagaa ggattcctgt tcccgtggtt
     1561 cacctacgtg cgcgaagcgg gacgtacgag cttggcggcg cctgtaggct tcgaactgga
     1621 gagctggaga gaatgaacca ggaaggatcc tggacctctt cggcttcggc agtagctacc
     1681 tgccgtaggg gttgcctgga atcgtgatcg tgatccccgc atccaccgtc agcacgtgtc
     1741 ccgtcaccca ccgcgcctct tcgctggcca gatagaccgc ggcccagccg atatcccagg
     1801 cagatccttc atctttgatg aggccagacg tggcacgccg ctggcgccca gcctcgtcca
     1861 accgctcggc gatcagcggc gtatacacct gcccgggtgc aatgcagttg acccgaatgc
     1921 gccggtcgcc gagtt
//
LOCUS       DASRPQ010002028         1170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2141977, whole genome shotgun sequence.
ACCESSION   DASRPQ010002028 DASRPQ010000000
VERSION     DASRPQ010002028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2141977"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          207 a          375 c          375 g          213 t
ORIGIN      
        1 cgaccgattc tgcagacaag atcgagccta ggcagccagg gaagatggca tgcagaccgc
       61 tgtagtcacc cacgggcgcc aaggttccgc tgcggtgcct tcgctcagca cgtgcgacaa
      121 ggcggtacat gcgggtagcg atgccacgcc caggacaccg ccggcgctgc gctgtgaccg
      181 ccgcaggtca ggaaagcgcg cgcgatagat cggcttcagg cagatgccgt aggctcccca
      241 gtgacggact acttctgcgg cgcatatcta gatcgcagtt ctgcctggtg agaggctatc
      301 cacctgttca tccgcaaggt gatgtatcag attgagtgac tgcctgcgag cagtcactca
      361 ttcgagtggc aaagttttcg aataactata agcttcctgc actatctgcg ccccgaccgc
      421 gactcgaacg cgggacctac tgcttaggag gcaccttcga agtgtggctg gaaggtgctg
      481 gatgttgcct gacgtgccat tccgcgcaca tgcgaatggc cggatgtggc ctgacgtcgc
      541 cctatgcctg cggtcgttgg ctccccgtct ggctccccga aatctcgtta gtaacgctaa
      601 cattcggatg cccgggacat gatgccggcg ctggatcgag cccttacaac atgcctcgcc
      661 tagctgatcg agtccagccg cgcgctcatg cggcagcggg ccgctccggc cgagcgccct
      721 gcatcggaag gccggtcaga tcatgccgcg atcggctgcg tctggctgaa tgccgggtaa
      781 tctgaccaag cgtgagcagc aggatacggt gcctgtatga cttcgagctc gaaccggagg
      841 tccgcgactg ggcggccacc agcggctgat ccccgtctcg gcgcggttct tcgccgaggt
      901 cagcgcctta cctcaaggcc gaacgtcccg ccggtccggg cacggacata gtgttcgtgg
      961 tactcaaggg accgcgccgt ggcatgccgc tgtcggccaa ggggctggat gagatcctcg
     1021 acggcgcccg cgggcgggcc gggctcgccc cgggcgacct accatcagct gcggcatacc
     1081 tgcctgaccc agctgtgcaa ggccgggatg tcgctggagg tggtgcaggc ccaggccggc
     1141 catgcctcga tgagtccacc cgcatctacc
//
LOCUS       DASRPQ010002029         1181 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3998460, whole genome shotgun sequence.
ACCESSION   DASRPQ010002029 DASRPQ010000000
VERSION     DASRPQ010002029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1181
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3998460"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..882)
                     /locus_tag="VFD73_23010"
     CDS             complement(<1..882)
                     /locus_tag="VFD73_23010"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase N-terminal
                     domain-containing protein"
                     /protein_id="HZI76848.1"
                     /translation="MSAAATLAGAVPDLAVDWHAIDWPKVYRNVRRLQARIVKAIGEG
                     RWGKVKALVYLLTHSFSGRALAILRVISNSGARTPGVDGILWDTPESKSAAFQALRRH
                     GYRPQPLRRAYIPESNGRRRALGIPTMTDRAMQALYLLGLDPIAETQADRHSYGFRLE
                     RCCADALDQCHKILSGPAGPDWISEGDIKACFDRIGHNWLLDHIPMDKELLRKWLKAG
                     FLEEHVLFATTDGTPQGGIISPVLANRALDGRQRLLEQRFGDKRQRRKEAKVHLVRYA
                     DDFIITGTSRVLLQREVQ"
BASE COUNT          194 a          373 c          375 g          239 t
ORIGIN      
        1 ttggacttct cgttgcagga ggacccgcga tgtgccggtg atgatgaagt cgtccgcata
       61 gcggaccagg tggaccttcg cttccttgcg ccgctggcgc ttgtcgccga agcgttgctc
      121 cagcagccgt tgccgtccat ccagggcccg attcgccagg acgggggaaa tgatcccgcc
      181 ttgaggtgtt ccgtccgtgg tggcgaagag gacgtgctcc tccaggaatc ccgctttcaa
      241 ccacttcctg agcaattcct tgtccatggg gatgtggtcc agcagccagt tgtggccgat
      301 tcgatcgaag catgctttga tatccccctc cgaaatccag tccgggccgg cggggccgct
      361 caggatcttg tgacattggt ccagggcatc ggcgcagcat cgttccagcc gaaagccata
      421 ggaatggcga tcggcttggg tctccgcgat cggatcgagg ccgagcaggt agagggcctg
      481 catggcccgg tcggtcatcg tggggatacc tagggcgcgg cgccggccgt tgctctcggg
      541 gatgtaggcc ctgcggagcg gttgcggccg gtagccgtgc cgacgcaggg cctggaaagc
      601 ggccgacttg gactccggcg tgtcccagag gatcccgtcc acgcccggag tccgtgcacc
      661 ggaattgctg atcactcgga gaatggccag agcccggcca ctgaacgagt gggtgagcag
      721 gtagaccagg gctttgactt tgccccacct gccctccccg atagccttca cgatacgcgc
      781 ctggagtcga cgaacattgc ggtagacctt cggccagtca atggcgtgcc agtcgaccgc
      841 aaggtcaggg accgcaccag caagcgttgc cgctgccgac atatttgctt tgtcccttta
      901 gcccgtttgc cagactctct cgtgaaacaa gaccagaggg aagtcagccc gctttcgcgt
      961 gaggggatgt cgcccgtggg agggcccacc ctctatccgt ccggttacag gacggccttc
     1021 gctcgctccc tcctccctta cccgctgtcc cacaggttcc tcttgcgagt cgctttccct
     1081 tcctccttgg cagggaggca ggcaggacaa cgggcttact tcgttcggct gaaagatctc
     1141 tgaagggaag gtcgcgcctc tcggccggtg gcccgtcatc c
//
LOCUS       DASRPQ010002030         3185 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1829595, whole genome shotgun sequence.
ACCESSION   DASRPQ010002030 DASRPQ010000000
VERSION     DASRPQ010002030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3185
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1829595"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1661
                     /locus_tag="VFD73_23015"
     CDS             <1..1661
                     /locus_tag="VFD73_23015"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HZI76849.1"
                     /translation="SLSAPQAVKWVLRQAGRLGLQLETAAAEHLVNAVGPDLGGLSTE
                     LAKLASLPSDLPLTTEHVGALVGVRRGETLLDWRTAIIDEQSGHAISLLPSILAQPGI
                     SGVKLVTALGTSLLGLALTRACYDGGLRGRALDDAVFKALLRNRPGGLLGYKEEIGRW
                     TRVVARWPAPRIRAALRATLEADQALKNTTISDERGVLTDLILRLGSGAKARSSGRLA
                     ARALALVIGFLVLFSIPGVSQTDPRLVEIIRNAQQGQGDSARIKVEQLLAATSPSDSL
                     YPQILYTKAMVSGEASDMRRQLQRIAVEYSSSSWADDALLRLVQLDYASGNLDGAARN
                     LERIRQDYPGSALLSQASYWAARTYFDLKKPELACRWLSQGVTGAQGNVELQNQLSYL
                     NQRCAKVAVAGPAPTDSQAPKPAPDSQASVARRAAGDSVKAPIADSAELPGSVPVPVR
                     PVPTPGPTDTLRAGSMAASPRSPSAAGTTTRYWIQITAVRTRPAAEAIVSRLKTRGYS
                     AVVAEEGGLYKVRIGGYATKADAAAAVPGVKAKLGGSPFVVAGS"
     gene            1982..2914
                     /locus_tag="VFD73_23020"
     CDS             1982..2914
                     /locus_tag="VFD73_23020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76850.1"
                     /translation="MRDTASASGGPPLRAAQVLTGWRHHPELLKAVGIDSVIATDGRT
                     LVIGVRDAPAEAAKLFAEPALAVIPDSGSTRPIGSGIRIQNVGWTTLEFVTASGDVRD
                     LLDSGVDLLVTRDLGLVEYAAGHRDLRVFPLPWSRTYVLVQPAIADSLRVAINADSVR
                     GSLARDAVKADARPASGGESAASCPSRAPVPAAWRVSRIVYLAGDSVARGLAERIVAL
                     DSQDPDLRAVGLPDSLLDVSLRTGSHRGYIVALSSAAENICSSGIPIPAGASIHPLIE
                     TRAHAIVRRGSPELTVDWDGIPRLAQPADRGDRR"
     gene            2911..>3185
                     /locus_tag="VFD73_23025"
     CDS             2911..>3185
                     /locus_tag="VFD73_23025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76851.1"
                     /translation="MSFRSRLFLAILLAVGLPLGAFTWGVSHELEQRLTTQYQQRVGT
                     VASIIEADLARESGTIGSRLAALSTEVGRDNRLRLALLQNDARNRQYL"
BASE COUNT          532 a         1031 c         1039 g          583 t
ORIGIN      
        1 agtcactctc ggcgccgcag gccgtcaagt gggttctccg ccaggcggga aggctcggcc
       61 tgcaactcga aacggcggcg gcagagcatc tggtgaacgc ggtggggccg gatctgggag
      121 gactcagcac cgagctcgcc aaactggcgt cgttgccgtc cgatctgccg cttaccacgg
      181 agcacgttgg tgccctggtc ggggtccggc ggggagaaac tctgctggac tggcggactg
      241 ccatcataga cgagcaatcg ggtcatgcca tttcgctgtt gccctccatt ctagcccagc
      301 ctggcatctc gggcgtgaag ctggtgacgg ccctcggcac gtcgctcctg ggcctggctc
      361 ttactcgagc ctgctacgat ggcggcttgc gcggccgggc actggatgat gctgtcttca
      421 aagcgctgct tcggaaccgg cctgggggtc tgctcggcta taaggaagag atcgggcgct
      481 ggacccgcgt cgtcgctcgc tggccggcac cgcggatccg ggccgcgtta cgcgcgacgc
      541 tcgaggcaga ccaggcgctc aagaacacca cgatctccga tgagcgcggg gttctcaccg
      601 acctcatcct gcgcctcggc tcaggagcaa aggccaggag ctctggcagg ctggcagccc
      661 gggcgctggc actcgtgatc ggattcctgg tgctgttcag cattcccggc gtgtcgcaga
      721 ccgatccccg actggtcgag atcattcgaa acgcccagca ggggcaggga gactcggccc
      781 gaataaaggt ggagcaactg ctcgccgcca cgtcgccgag cgacagcctc tatccgcaaa
      841 tcctctatac caaagcgatg gtctccggag aggcgtcgga catgcgccgg cagcttcagc
      901 gaattgccgt ggaatattcc tcctccagtt gggccgacga tgctctgctg cgtctggtcc
      961 agctggacta tgccagcggc aatctggatg gtgccgcccg gaacctggag cgaatccggc
     1021 aggattatcc gggcagcgcg ctcctgtcac aagcatcgta ctgggctgcc cgtacgtact
     1081 tcgatttgaa aaaaccggag ctggcctgcc gctggctgag tcagggagtg accggcgcgc
     1141 agggaaacgt ggagctgcag aatcagctga gctacctgaa ccagcgctgc gccaaagtgg
     1201 ccgtggcggg accggctcca accgactctc aggctccgaa gcccgcgccg gattcccagg
     1261 ccagcgtggc gaggagggca gcaggggatt cggtcaaagc acctatcgcc gacagtgccg
     1321 agctacctgg ttcggttccg gtgccggtac gccctgtccc gacgcccggg ccgactgata
     1381 cgctgcgtgc cggttcgatg gcggcatcgc cgcgttctcc ttccgctgcc gggacgacaa
     1441 cccgctactg gattcagatc accgcggtac gtactcgacc agcggccgaa gcgatcgtga
     1501 gccggcttaa gacccggggc tattcggcgg tagtggccga ggaaggtggg ctatataagg
     1561 tgcgcatcgg gggctacgcc accaaggcgg atgcggcggc ggcggtgccg ggagtcaagg
     1621 cgaagctcgg aggcagccca ttcgtggtcg ctggttccta acgctccact cgagagccgg
     1681 ctggctgctg ctggcgctgg ccgcgtgcgc accgcgatcc gccgcacccc ctccctctcc
     1741 tcagtcgaca gatccctgcc gcatcgcgac tgactcggcc ggccagctgg acaccttcag
     1801 agtagctctg ccggaatcgg ttgatctgtc acacgcgccg gtcccgacca acgacagcga
     1861 gcggctgctc tttcgccagc tctttcccac cctggtccga atcgattgtc agggcgagat
     1921 ccgtgcacaa ttggccgacg cctggtccca tgatagctcg ggccggacct ggcgattcag
     1981 cttgcgagat acagcttcgg cctcaggcgg gccgccgcta cgcgcggcgc aggtcctcac
     2041 cggctggcgg catcatcccg agctcctgaa agccgtgggg atcgattcgg ttatcgccac
     2101 cgacggtcga accctcgtta ttggcgttcg cgatgcgccg gcggaagcag cgaagctctt
     2161 tgccgaaccg gcgctcgcgg tcattccgga ttcgggctca actcggccca tcggcagtgg
     2221 catcaggatc cagaacgttg ggtggaccac tctcgaattc gtgaccgcct cgggtgatgt
     2281 gcgtgacctg ctcgattccg gagtcgacct cctggttacc cgcgacctcg gcctcgtcga
     2341 gtacgcggcc ggccatcgtg atctacgggt gttccccctg ccctggagcc gcacctacgt
     2401 gctggtccag cctgccatcg ccgattcgtt gagggtagcg atcaatgccg attcggtcag
     2461 gggatctctc gcgcgcgatg cagtaaaggc ggatgcccgt ccggcgagtg gcggcgagtc
     2521 tgctgcctcg tgcccatcca gagctcccgt accagcggct tggcgggtgt cgcgcattgt
     2581 ttaccttgcc ggagactcgg tggcccgggg tctcgccgag cgaatcgtag cactggatag
     2641 ccaagatcca gatctcagag cggtgggcct gcccgattct ctgctcgatg tatcacttcg
     2701 aaccggcagc caccgcggct acatcgtggc actttcatcg gctgcggaga acatctgttc
     2761 ttcgggtata ccgattcctg ccggtgcttc gattcatccg ctgatcgaga cgcgagctca
     2821 tgctattgtg aggcgcgggt ctcccgagct gaccgtggac tgggacggca tcccgcgcct
     2881 ggcgcagccc gccgaccgag gagatcggcg atgagctttc gaagccggct gttcctggca
     2941 atcctgcttg cagtggggct gccgctcggc gcctttacct ggggagtgag ccacgaactg
     3001 gagcagcgcc tcaccaccca ataccagcag cgagtgggta cggtggcctc gatcatcgaa
     3061 gccgatctgg cccgggagag tggcaccatc ggctcacggc tggcagcact ctcgactgaa
     3121 gtagggcgag acaatcggtt gcggctcgcg ctgctccaga atgacgcgcg aaatcggcaa
     3181 tacct
//
LOCUS       DASRPQ010002031         1850 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4302701, whole genome shotgun sequence.
ACCESSION   DASRPQ010002031 DASRPQ010000000
VERSION     DASRPQ010002031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1850
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4302701"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            650..1210
                     /locus_tag="VFD73_23030"
     CDS             650..1210
                     /locus_tag="VFD73_23030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76852.1"
                     /translation="MRFFRKSPGPGPAPRRVHHPWNPPEAEFPGIVAMETLHFDRSEQ
                     AAVAIIGVAAYARGFEFVLARRIRPGTPGLDEDPTPEMRRRRLREPEEFPISVLFSDG
                     RQAVSGRPHGDFEPTGPILQSRGGGGTSHSQLFQWWVWPLPPAGPLEFICQWPVYGIG
                     ETRVGIDGQVILDAARRSVQLWPEDG"
     gene            complement(1666..>1850)
                     /locus_tag="VFD73_23035"
     CDS             complement(1666..>1850)
                     /locus_tag="VFD73_23035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76853.1"
                     /translation="QVKLVLGEPAVHERGLERVAHLLAADVRRQQVAVAFCAFCRLVS
                     RPGYPADSSCAQSTKA"
BASE COUNT          367 a          613 c          579 g          291 t
ORIGIN      
        1 ttgctcactt tagctgccgt caggaaatgg tctacggcca cccttgagcg tcggcgcgtc
       61 tgcaccccat cggccagaaa ccaagggcca ggcagcagct tgcccggaac ggacgcgggc
      121 catcacctgc gaggtgcagc agtcatccga tagggagcaa tgtcgtgccc gctgcgtgcc
      181 cgatcagaca gtaatcccgg gatcccacgg tcactgaggg acaaaccgcc gtccgagctg
      241 acctgcggct acgaagctta cgacagcggc gcttacgtcc tcccaggcag tcggtcacat
      301 cagcgcccaa tgagacgatg aagccatgac ggaagcgctt tcggatccac agccaacccc
      361 cgcggtacca ggccataatc acggcggcat ctagacgcgc ggttgacctt gggcacgact
      421 acatcggtac cgagcatcta ctacttgcgc tgctggctga cacggatgcc gttgcgacac
      481 aggtcctcgg ccggttcgcg cctgccaccg aaatcaccga cgaactccag gcggttatgg
      541 cgtcggagtc gtacaacaca cccgggtcac gccgagctcg gcctgacttc ttagcagcca
      601 attccccggt ccggttgcat gacggaaaac gctggtcaag gctggtgccg tgcgcttctt
      661 tcgcaagtca ccaggtccgg gaccggcgcc acgccgggtg catcacccgt ggaacccacc
      721 tgaggcggaa ttccctggca tcgtggcgat ggaaaccctg cactttgacc ggtccgagca
      781 ggccgcggta gcgatcatcg gggtagcggc ctacgccagg ggattcgaat tcgtcctggc
      841 ccgccgtatc cggccgggta ctcccggcct cgatgaagac cccacgccgg agatgcgcag
      901 gcgcagactc agggagcctg aggaattccc gatcagcgtg ctgttctccg atggccgcca
      961 ggccgtcagc gggagaccac atggcgactt tgaacccaca gggccgatcc tgcaatcgcg
     1021 cggcggcggc ggcacctcgc attctcagct gttccagtgg tgggtgtggc cgctgccccc
     1081 ggccgggccg ctggagttca tctgccagtg gccggtgtac gggatcgggg aaacgcgggt
     1141 cggcatcgat gggcaggtga tcctcgacgc tgcccgccga agcgtccagc tatggccaga
     1201 agatggctga gctgacagca acgtcggcgg ccaacccccg ccactgacaa cacgacggca
     1261 gccagtcacg cttggacctg atcacccgaa caggcaggcc gccacgcctg aagcagacgc
     1321 tcagaaggcc atcagccctg tccagcggca agatcgtcgt gccattagcg tgccattaaa
     1381 cccggcaacg aagggtcctc acgatcactc gcagccaccc taccttgcag gtcaggccgt
     1441 ataggcagcc cgaaccacac agattctcaa gctgacaggg cgaattctgt taactcacga
     1501 gcgacgcgac gttccgccag tccgtcgagc gcctcgcggc ccagtcatcc cacagccttg
     1561 gccatcgtgt aggaagcgcg gaaacggttc tgaacgggtc cggatacccg caccgggaac
     1621 tgcggattac aaggcctgag gatgctggcc aacggcctga gcacgctacg ctttcgtaga
     1681 ttgcgcgcat gaagagtcgg cggggtagcc gggccgggag acaagacggc agaaggcgca
     1741 gaaggcgaca gcaacctgct gacgtcgcac gtcggccgcg agcaggtgcg cgacgcgctc
     1801 aaggccgcgt tcgtgcacgg ccggctcgcc aaggacgagt ttgacctgcg
//
LOCUS       DASRPQ010002032         3646 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3405259, whole genome shotgun sequence.
ACCESSION   DASRPQ010002032 DASRPQ010000000
VERSION     DASRPQ010002032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3646
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3405259"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..320)
                     /locus_tag="VFD73_23040"
     CDS             complement(<1..320)
                     /locus_tag="VFD73_23040"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008263 - pyrimidine-specific mismatch
                     base pair DNA N-glycosylase activity [Evidence IEA];
                     GO_process: GO:0006285 - base-excision repair, AP site
                     formation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mismatch-specific DNA-glycosylase"
                     /protein_id="HZI76854.1"
                     /translation="MAASVGRRVPDLIEPNLEVLFCGINPGLYSGATGHHFARPGNRF
                     WPALQRSGFTPTLLSPWEERSLLDLGIGITNLVARATAAASDLTDAELRAGRRRLERK
                     VRRYT"
     gene            complement(374..760)
                     /locus_tag="VFD73_23045"
     CDS             complement(374..760)
                     /locus_tag="VFD73_23045"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HZI76855.1"
                     /translation="MTASRSDAQPFLPRPEDLETFYVAFLYPGVGYSDAEPRSEEHRA
                     IMQTHVAYVWSSQHGDGPAVAGGPLMAADQSLPKGMTVLRAASLSEAQHLAAIDPAVV
                     TGHFRVVVVPWLVAPGRFPRERPGGT"
     gene            complement(766..1131)
                     /locus_tag="VFD73_23050"
     CDS             complement(766..1131)
                     /locus_tag="VFD73_23050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76856.1"
                     /translation="MNISARRLHRLIASGLAVVALAGAPRPSFAASFGRSSPWPDPAF
                     LDYRQCHGRYDIQELNRLVPRARVALWLPGTRSVVVDQERHCITVTVESFGDGRLAEL
                     VMRGVAVPRRAVFLRLDRG"
     gene            complement(1228..1635)
                     /locus_tag="VFD73_23055"
     CDS             complement(1228..1635)
                     /locus_tag="VFD73_23055"
                     /inference="COORDINATES: protein motif:HMM:NF021612.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase-like protein"
                     /protein_id="HZI76857.1"
                     /translation="MSINLFQFAGGVVVGLLVGWVYLVVWRLRYTSIVRRDAVVRSQA
                     VISGKVHEQLVPYLPSFAYNPKDVRFLGSPVDLVVFDGLTEGHLRRIIFLEVKTGRAG
                     LTGRERLVRDAVQTRRVEWAELRVHHPAEPGVA"
     gene            1829..3043
                     /locus_tag="VFD73_23060"
     CDS             1829..3043
                     /locus_tag="VFD73_23060"
                     /inference="COORDINATES: protein motif:HMM:NF012632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76858.1"
                     /translation="MVSRWPLIATSAILGLSGAACSDSTGPSGPSAAVPSTLSAGGHH
                     ICRITQDGTAVCWGRADAGQLGTDSTPVMSVPVQAAAGDVRFTSIAAGGLHTCALTAD
                     GQAWCWGQNDVGQAGLPISMNQVCGNPIHGWRCVPRPHPLDTTIRFQALIAGSANTCG
                     FALDGSAYCWGSNGSGQLGATAPDVCGSTSCSISPVLLPAQPRLRSLSVGSGAHLCGL
                     TSDGTAYCWGSNSYGQLGIGTVGDNRQVPTQVSGQIKFKSIAVGGQHTCALDTSGLPW
                     CWGGDILPPGEGGVSLSAVPVAIAASPNFADIITGTWAACGRTAQGQAFCWGINAYGE
                     MGITPSGLTTRYSMPQRMTTSLQWRILVGSHGTFCGLTSALETWCWGFGDYGELGPVH
                     QQSAVPVRIGGV"
     gene            complement(3073..3567)
                     /locus_tag="VFD73_23065"
     CDS             complement(3073..3567)
                     /locus_tag="VFD73_23065"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HZI76859.1"
                     /translation="MLILRSVAGASIALAAVASWSASVESAGALAPLNPAVTQSGWMA
                     QDTPPGSPSQQTQVDTSKAPRVSPVEYEGWRQYSVQCARCHGQDVLPNPVAANLLTSL
                     AAGGPIDTPQKFTQVVTEGRTHRGMPAFRGTMTPEQIQAVYAYVKGRAEKRIPPGRPQ
                     KPAG"
BASE COUNT          694 a         1170 c         1142 g          640 t
ORIGIN      
        1 gtatagcgcc gcactttgcg ctccaagcgt cggcggcccg ctcgcagctc ggcatcggtc
       61 aggtcgcttg ctgcagcggt ggcgcgagca acaaggttgg tgattccaat gccaaggtcc
      121 agcagcgacc gttcttccca gggactgaga agtgtggggg tgaacccgga acgctggagc
      181 gcaggccaaa aacggtttcc cggccgagcg aagtgatggc ccgtcgcgcc ggagtagagc
      241 cctggattaa tcccgcaaaa cagaacctcg aggttgggct cgatcaggtc cggcaccctg
      301 cggccaaccg acgctgccac ctccgatcgg ctgggtcgcc ggatgactgg cgccctggtt
      361 cgggcattca cgctcaggta ccgcctggcc gctcgcgcgg gaagcgcccc ggcgcaacca
      421 gccacggcac gaccacaacg cggaagtggc cagtcaccac tgccggatcg attgcggcca
      481 gatgttgagc ttcggacagg gaagcggccc gcagaaccgt catgcccttg ggcaggctct
      541 ggtcggccgc catcagcggg cctccggcga cagccggccc atcgccgtgc tgcgagctcc
      601 acacgtacgc gacgtgggtc tgcatgatcg ctcggtgctc ctccgatcgc ggctcagcgt
      661 cggagtagcc aacccccgga tagaggaagg ccacatagaa cgtctccaga tcctccggcc
      721 ggggaaggaa cggctgcgca tcagaccgtg aggcggtcat caagctcagc cgcggtccag
      781 gcggagaaac acagcccggc ggggtacggc gactccgcgc atgaccagct cagccagacg
      841 gccgtcgcca aaactttcca cggtgaccgt gatacaatgc cgttcttgat ccacgacgac
      901 gctgcgggtg cccggaagcc aaagagccac tcgcgcccgg ggaaccaacc gattcagctc
      961 ttgaatgtca tatcggccat gacactgacg gtagtcaagg aaagctggat cgggccaggg
     1021 agaactccgg ccgaaagagg cggcgaagct gggacgcggc gccccagcca aagcgacaac
     1081 agccagacct gaggcgatca gccggtgaag gcgacgtgca ctgatattca tgatgaagct
     1141 ccgactctcg agaatgtcga ttccgggccg tagcaggaag actgagctat atccccgtgg
     1201 gaggcaacgg cagcgggagc ggtttcttca tgccactcca ggctcggctg gatggtgaac
     1261 tcggagttcg gcccactcga ccctgcgggt ctgtactgca tcacggacca gccgctccct
     1321 ccccgtaaga ccagctcgac ccgtcttcac ctcgaggaag atgatccggc gcaggtgacc
     1381 ttcggtgagg ccgtcgaata ccaccaggtc caccggactt ccaaggaagc gcacatcttt
     1441 gggattgtag gcaaagctcg gaaggtacgg gaccaactgc tcatggacct tgccggaaat
     1501 caccgcctgg cttctcacca ccgcatctcg gcgcacgatc gaggtatagc ggagccgcca
     1561 gaccaccaag tacacccagc cgaccagtaa cccgacaaca actccaccgg caaattgaaa
     1621 cagattgata gacaagcctc ctccagacgt tatgaggacg actgaacctt cggaacaaca
     1681 gtcagtagaa tgaggggcgg gtcttttatt atgccgccct gatcaccgcg gggcaacgca
     1741 tactcccacg atctaccatg tgtcgctccg gcgtggtcag tgcgtcccct tgctcgattc
     1801 cgccggagaa cagcgcttgc gagatacgat ggtctcgaga tggccactga tcgccacgtc
     1861 agcgatcctc gggctttctg gcgcagcctg tagtgactcc accggcccga gtggtcccag
     1921 tgccgcagtt ccttctaccc tctcggcagg cggacatcac atctgccgca tcactcagga
     1981 tggcactgcc gtgtgctggg gccgggccga tgcaggacag ctcgggacag attcgacacc
     2041 ggtcatgtcc gtgccggtcc aagccgccgc tggcgacgtt cggttcacca gcattgcggc
     2101 cggtgggctg cacacctgcg ctctgacggc agatggacag gcatggtgct gggggcaaaa
     2161 cgacgtcggg caggcagggc tccccatctc gatgaatcag gtgtgtggca acccgatcca
     2221 tggctggcgc tgcgttccgc gtccgcatcc gctggacaca actattcgat tccaggcgct
     2281 catcgcggga agtgccaaca cttgcgggtt tgcgctcgac ggaagcgcgt actgttgggg
     2341 ctcgaatggc agcggccaac tcggcgccac ggctcccgac gtgtgcggca gcacatcatg
     2401 tagcatctca ccagtgctcc tgccggctca gccccggttg cggagcttgt cggtcggaag
     2461 tggagcacac ctctgtggcc tcacctccga tggaaccgct tactgttggg gctcgaactc
     2521 ctacggtcag ctcggcatcg gaacggtggg agacaatcgt caggtaccga cacaggtcag
     2581 tggtcaaatc aagttcaagt cgatcgcggt tggtggacag cacacctgtg ccctggacac
     2641 ctccgggcta ccctggtgct ggggtggcga cattctgccg cctggagaag gtggagtgag
     2701 cctctcagcg gtgccggtgg cgatcgcggc ttctcccaac ttcgccgaca tcatcaccgg
     2761 cacttgggca gcctgtggtc gaacggctca gggacaagca ttctgctggg gcatcaacgc
     2821 gtatggagag atggggatca ctcccagcgg ccttaccacc cgatactcga tgccgcagcg
     2881 gatgaccact tccctgcagt ggaggatact cgtcggctcc cacggcacct tctgtggatt
     2941 gacttcggcg ctcgaaacct ggtgctgggg ttttggggat tacggcgagc tgggcccggt
     3001 gcaccagcaa agcgccgttc cagtgcggat cggcggggtc tgacgggcgg gcagccgacc
     3061 cggcgagtgc gatcaacctg ccggcttctg cggacgcccg ggagggatgc gcttctcagc
     3121 ccgtcccttc acgtaggcgt acactgcctg gatctgctct ggagtcatgg tgccgcgaaa
     3181 ggctggcatg ccccgatgag tccgcccctc ggttaccact tgcgtgaact tctgcggagt
     3241 atcgatcgga ccgccagcgg ccagtgaggt cagcagattg gcagcgaccg gattgggcaa
     3301 cacgtcctgt ccgtgacacc gcgcgcactg cacgctgtat tgacgccacc cttcgtactc
     3361 taccggactg actcgggggg ccttactcgt atccacctgg gtctgctggg acgggctgcc
     3421 gggcggagta tcctgagcca tccagccact ctgggtgact gcgggattca gcggagcgag
     3481 tgccccggcg ctttcaaccg atgcactcca gcttgccact gctgccaagg cgatcgaagc
     3541 tccagccaca ctccgtagaa tcagcaccag tttgcgcctg gcatagtttc agcctccggc
     3601 cttcaccgcc ggacggccgg ggtgaatctt ggcatcgctg cgacct
//
LOCUS       DASRPQ010002033         1602 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1830026, whole genome shotgun sequence.
ACCESSION   DASRPQ010002033 DASRPQ010000000
VERSION     DASRPQ010002033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1830026"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            101..>1602
                     /locus_tag="VFD73_23070"
     CDS             101..>1602
                     /locus_tag="VFD73_23070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76860.1"
                     /translation="MPPRRSWTDPFTNHTELAGVEIRENLELLAGIGETPQTLLLPFL
                     HEAAHHWCFLSPVGNTLALLKTRARRLAVSVAAGEVEKDPAFLLDMVACKVAIELLRP
                     FSEGLALAVELDSLTRKTNYLSWPFSAAARAFALSPNESPIGTLMPLNRALIMARRER
                     SGLRRKMNVYADSIGSQGNGYLLGYLTMRSMMRKLASKEIRLAEEADLAIGFLRSFFY
                     EDWQLVDALLERDTDWVSLANGIEDRIISRFRSIADVTPDQVRDFELGASTDQDARTD
                     ARYAAALRYDAAAADRGESRLAALYESVRQPPSFDHEDLQTYGKIIWLLDRELLANRN
                     LVDLGSCEVLIRVENHECSVSLNGQTILSGQQTDLDDFSGPGQLDVCYDSSSHGHDRI
                     LMVSTDSHGLIAITHHGPVLNSSAALPDIHLARSFVRQRIDGFDALAESKLQSRHGRI
                     LSQVKEQIPAVVESCYLGPALSSVPDEYVDEMLRSLRTAGLKTVLGDDRDL"
BASE COUNT          303 a          490 c          503 g          306 t
ORIGIN      
        1 ttccagcatc acggagcccg aagtggtcaa gcagctgatg gatgggctga agctagatcc
       61 cggctggact gacgccgtca ccgcctcgga gcattgagaa atgcctcccc ggcgcagctg
      121 gacagacccg ttcactaatc acactgagct cgccggggtc gagatacgag aaaatctcga
      181 gctgcttgcc gggatcggcg agacgccgca aaccctcttg ttgccattcc tgcacgaagc
      241 agcccaccac tggtgcttcc tgtcgccggt cgggaacacg cttgcgctgc tgaagaccag
      301 ggcccgccgg cttgcggtat cggtcgccgc gggcgaggtg gaaaaggatc ctgctttcct
      361 gctggatatg gtcgcctgca aggtggcgat cgagctgctc cggcccttca gtgagggcct
      421 ggcgctcgcg gtcgagctcg atagcctcac ccgcaagaca aattatctat cgtggccttt
      481 cagcgccgcc gccagggcct ttgccttgtc gccgaacgaa tccccgatcg gcacactaat
      541 gccgctgaac cgtgcgctga tcatggcgcg acgtgagcgg agcggcctgc gccgcaagat
      601 gaacgtatac gccgatagca tcggatctca gggaaatgga taccttctcg gttacctgac
      661 catgcggtcg atgatgcgga aactggcgtc gaaagagata cgtctagccg aggaggcaga
      721 cctcgccata ggtttccttc gctccttctt ctatgaagac tggcagctcg tcgacgcgct
      781 gctcgagcgg gacacggact gggtctcgct cgcgaacggc atagaggacc gtatcatcag
      841 ccggttccgt agcatcgcgg acgtcacgcc cgatcaggtg agggatttcg agctgggggc
      901 gagcaccgac caggatgctc gtaccgacgc ccggtatgcg gcggcgctcc ggtacgacgc
      961 ggccgccgcg gatcgggggg aatcccgcct cgccgcgctg tacgagagcg tgcggcagcc
     1021 tccgtcgttc gaccatgagg atctccagac atatgggaag atcatctggc tcctggatcg
     1081 tgagctgctg gccaaccgga acctggtgga cctggggagt tgcgaggtac tgatacgggt
     1141 agagaatcac gaatgctcgg tgagcctgaa cggccagacc atcctcagcg gtcagcagac
     1201 ggatctggat gatttctccg ggccgggtca gctcgacgtc tgttatgact cgagctcgca
     1261 cggtcatgac cgcatcctga tggtatccac ggatagtcac ggcctgatcg cgatcaccca
     1321 ccacggcccg gtgctgaact cgtcggctgc gttgcctgac atccacctcg ctcgttcgtt
     1381 tgtccggcag aggatcgatg gtttcgacgc cttggccgag tccaagctgc agagccgcca
     1441 cggacgcatt ctcagccagg taaaagagca gattcccgct gtcgtcgaat cctgctatct
     1501 cggacccgct ctgagctcgg tacctgacga gtacgtggat gagatgctgc ggtccctgcg
     1561 taccgcgggg ctgaaaacag tgctgggcga cgatcgtgac ct
//
LOCUS       DASRPQ010002034         1217 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3052514, whole genome shotgun sequence.
ACCESSION   DASRPQ010002034 DASRPQ010000000
VERSION     DASRPQ010002034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1217
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3052514"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..293
                     /locus_tag="VFD73_23075"
     CDS             <1..293
                     /locus_tag="VFD73_23075"
                     /inference="COORDINATES: protein motif:HMM:NF015181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein MobB"
                     /protein_id="HZI76861.1"
                     /translation="DDYDPIGLARRYMDGADIVITEGYKSAPLPKIEVYRRAVNRHPL
                     YDPTAPNANQWVAIITDDPGFQAECSVLHFHDTIWLQLLANLAWEHSLAVTP"
     gene            290..>1217
                     /gene="glp"
                     /locus_tag="VFD73_23080"
     CDS             290..>1217
                     /gene="glp"
                     /locus_tag="VFD73_23080"
                     /inference="COORDINATES: protein motif:HMM:NF045515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HZI76862.1"
                     /translation="MTGPFTAAEAAEKILAEIRRQPALRIPLDDALGSVLAEDIVSPI
                     DIPAWTNSAMDGYAARGADVRGASVAKPVRLQVVEHLPAGQFPTRSIGPGECARIYTG
                     APLPDGSDSVIRQEDTDGGSDVVAITNDRDVGVNFRLAGEDIHKGARVMTAGTELGPA
                     QLGVLASLAIAHPLVYRRPRVAILGSGDEIVDVDQPEEILSGRKIASSNTHTLVALVH
                     QAGGEPVNLGIAADTRESLKSHLSRALDCDLLITTAGISVGEHDYVREVLQDLGGVLR
                     FWKLRMRPGAPVGFGLLGEMPWVGLPGNPVSTM"
BASE COUNT          228 a          379 c          393 g          217 t
ORIGIN      
        1 cggatgacta cgatccaatc ggactggcac gtcggtatat ggatggggcg gacatcgtga
       61 tcaccgaggg gtacaagtcc gccccgctgc cgaagatcga ggtgtatcgc cgggccgtta
      121 accggcaccc gctctacgat cccaccgctc ccaacgccaa ccaatgggtt gcaatcatta
      181 ccgacgaccc tggcttccag gccgaatgca gcgtgctcca cttccacgac accatctggc
      241 tgcaactcct ggccaatctc gcctgggagc attccctcgc cgtcacccct tgaccggccc
      301 gttcactgcg gctgaggccg ccgaaaaaat cctggcagag atacgtcgac agcccgcgct
      361 gcgtattccg ctggatgatg cactggggag cgtcctggcg gaggatatcg tcagtccgat
      421 cgacatcccg gcatggacca actcggctat ggatggctat gccgcacgcg gagccgatgt
      481 gcggggtgcc tcggtggcaa aaccggttcg gctgcaggtt gtagaacatc ttcccgccgg
      541 ccagttcccc actcggtcga tcggcccggg tgaatgcgcc aggatttaca ctggcgcgcc
      601 gctaccggac ggcagcgaca gcgtgatccg ccaggaagac accgatggag gaagtgacgt
      661 cgtcgccatc accaacgacc gggatgtcgg agtcaacttc cgccttgccg gcgaggatat
      721 acacaagggg gcgcgggtta tgaccgccgg gaccgagctt gggcccgcgc agctgggcgt
      781 cctcgcttcg ctggcaatag ctcatccgct tgtgtaccgg cgtcctcggg tggccatact
      841 ggggagcggt gacgagatcg tcgatgtgga tcaaccggag gagatcctca gtggtcgaaa
      901 gatcgccagc agcaacaccc acaccctggt cgctctggtt caccaggctg ggggcgagcc
      961 ggtcaatctg gggatcgctg cggacacacg tgagagtctg aagagtcacc tctcccgggc
     1021 actggattgc gatctgctga tcaccaccgc gggcataagc gtcggggagc atgactacgt
     1081 ccgggaggtg ctccaggacc tcgggggggt ccttcgcttc tggaagttac gcatgcggcc
     1141 gggtgccccg gtgggattcg gtctgctcgg agagatgccg tgggtgggac taccgggaaa
     1201 tccagtcagc accatgg
//
LOCUS       DASRPQ010002035         4954 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4630493, whole genome shotgun sequence.
ACCESSION   DASRPQ010002035 DASRPQ010000000
VERSION     DASRPQ010002035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4954
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4630493"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1282)
                     /locus_tag="VFD73_23085"
     CDS             complement(<1..1282)
                     /locus_tag="VFD73_23085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76863.1"
                     /translation="MSRRLRLLYPFLFAILPVLLIINRNPGASSSVDDLAVVVAMLVG
                     CAVLYLLVALLAKRQLWNPIVPLIVFASIIWFYWYDTIIGLSHRAWRALPSSIAAILG
                     LVLTILVLSWLQRRPRYLERLTSFLGLTGVLLVGWSGVKIIRSKIAERQEVRRSALAA
                     EYRRPIPAPAGARRGPERDLYLILLDEYTNSGVLRDVFGFDNRVFEDSLRQLGFTIPR
                     ETQSNYIHTMLSLPSLLNFGHLTRLTDELGARSNDPTLPDYLLENNRTVAFLKSRGYR
                     FLFFPSQWWISTQSNRKADWTYQAWTGFDLGRAATRSDLRRSLVNTTALSLLQTNYAY
                     DADHVTRTLLAMEEVPKLPEATFAFAHVLSPHRPYAVHADCTPREERVPLGGPWVPRR
                     RQIYIEQLQCVNHLVSRVVTEILRRSTVPPIIIIQ"
     gene            complement(1279..2676)
                     /locus_tag="VFD73_23090"
     CDS             complement(1279..2676)
                     /locus_tag="VFD73_23090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76864.1"
                     /translation="MNWQVVEGSFRDPSGFVYTRDGTLYRQVNRSFAQEFDAFIASGL
                     YEELARDGLLVAHRQVGLESAANDDAHAVLQPDRIEFISYPYEWSFGQLKDAALLTLT
                     IQERAIGRGFTLRDSSSYNVQFRGGHPVFIDTLSFAPLEEGKPWTAYKQFCEHFLLPL
                     TLMSTRDIRCEALLRSYIDGIPLDFGSRLLPRRTWLGLSTLLHIHMHAWAQSRYAGSA
                     VTTTAAKGRSMSRQGLLTLVKNLKSAVQGLAWRAAGTEWAEYVTDNNYSEAAARSKRD
                     TVQAFLRRSQPHSVWDLGANTGEYSRAAREIAPLVVSFDVDPAAVERNYQRAKSNQES
                     GILPLLLDLTNPSPALGWAGRERLSLEQRGPADTVMALALIHHLAIGNNLPLERVASY
                     FSRLGRKLIIEFVPKADSQVKRLLLSRPDIFPLYTREGFEAAFRQHFTIDAVEPVQES
                     ERWLYLMTACPRSEG"
     gene            complement(2673..2939)
                     /locus_tag="VFD73_23095"
     CDS             complement(2673..2939)
                     /locus_tag="VFD73_23095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76865.1"
                     /translation="MQSSKDQLALLPGSFLAIALHYRNVTIPWPDRPPITRSGRPHMY
                     IDPTTGSLVLQFLAAGVLSVVAMASRVREAVKSFFKMLLPRKRR"
     gene            complement(2954..4363)
                     /locus_tag="VFD73_23100"
     CDS             complement(2954..4363)
                     /locus_tag="VFD73_23100"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HZI76866.1"
                     /translation="MTIAIVNPATGQTVRTFVPLSEADLDAKLQCAAETFRRYRTTPL
                     AERTRRLTRAAEILESEKEKFGRLMVTEMGKTFKAAVEEAVKCALGCRYYAEHAEQFL
                     SDQVVETSAKRSFVTYQPIGPILAIMPWNFPFWQVFRFAAPALAAGNVGLLKHASNVP
                     QCALAIEDIFRRAGFPEGCFQTLLIETDRVRRVIEDHRVSAVTLTGSTGAGSHVASTA
                     GKQIKKTVLELGGSDPFIVMPTADLDAAARTAVKARTINNGQSCIAAKRFIVAEPIAD
                     EFERRLVAGIQSLVVGDPMDPNTDVGPLANEAQVKTLEDQLARSVQAGARLLVGGYRL
                     DRPGCYFAPGVVTGITKDSPAYREEVFGPVALLFRVKDADTAIQLANDSDFGLGASAW
                     TRDPTERDRFVAELESGMVFINAMVASDPRVPFGGVKQSGYGRELSYQGLREFVNIKT
                     VWIQDNDNAEPAPRLSESE"
     gene            4430..>4954
                     /locus_tag="VFD73_23105"
     CDS             4430..>4954
                     /locus_tag="VFD73_23105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76867.1"
                     /translation="MRALNELLHASIDYAGLFPPAQLDMTTAVENYARYLASDSAWAL
                     GRFIVPAAQLPELAEAAQRFRADPAGTPWSIAALAGSNRAGDQDHIRRFNAAHTARGQ
                     VDTLELKASSTAEIHRSMAAIPRQLQVYVEIPIDEDPAKLIEEIGRRGARAKVRTGGV
                     TRDAFPSPAQLARFM"
BASE COUNT         1022 a         1491 c         1535 g          906 t
ORIGIN      
        1 cctgaatgat gatgatgggt ggtacggtcg aacgccgcag gatttccgtc accacccggg
       61 acaccaggtg attcacgcat tgcaactgct ctatatagat ctgccgccgt cggggcaccc
      121 acggtccgcc gagcgggaca cgttcctctc ggggagtgca gtcggcgtga acggcatacg
      181 gccggtgagg actcaggacg tgggcaaagg caaaggttgc ctccggcagc ttggggacct
      241 cctccatagc caggagtgta cgggtcacat ggtccgcgtc gtacgcatag ttcgtctgca
      301 gcaggctgag cgccgtggta ttgaccaacg atcgacgaag atccgaccgg gtggccgctc
      361 ggcccagatc gaacccggtc catgcctgat aggtccagtc agccttccga tttgactgag
      421 ttgagatcca ccattgggag gggaagaaaa gaaaccggta tccgcgactc ttcaaaaacg
      481 ccaccgtgcg gttgttttcc agcagatagt ccgggagcgt ggggtcgttg gagcgggcgc
      541 caagctcgtc agtcagccgg gtgaggtggc caaagttgag aagcgacggc agcgagagca
      601 tggtgtggat gtagttgctc tgggtctccc ggggaatggt gaagccgagc tgccgcaggc
      661 tgtcctcgaa cacacgatta tcgaacccga agacatcgcg caacacgccg gagttggtat
      721 actcatccag caggatcaaa tagagatccc gctccggacc acggcgggct ccggccggtg
      781 ccggaatcgg ccggcggtac tcggcggcca acgcgctgcg gcggacctcc tggcgctccg
      841 caatcttgct gcgaatgatc ttgacccccg accagccgac caggaggact ccggtcaatc
      901 cgaggaacga cgtcagccgc tccagatatc tggggcggcg ctggagccag ctgagaacaa
      961 gaattgtcaa gaccagtccc aggattgccg cgatcgatga cggcagggcc cgccatgccc
     1021 gatgactcag gccgatgatc gtgtcatacc agtagaacca gatgatcgag gcgaacacga
     1081 tcagaggcac aatgggattc cagagctgcc gcttggcgag cagcgccacc agcagataga
     1141 gcactgcgca gccaaccagc atcgcgacga cgacagcgag atcatcaact gagctggatg
     1201 cccctggatt tcgattgatg atcaggagga caggcaggat ggcaaacaga aaagggtaga
     1261 gcaacctgag ccgacgactc atccctccga cctggggcac gcagtcatga gatagagcca
     1321 gcgctctgat tcctgcaccg gttccaccgc atcaatcgta aaatgctggc ggaaggccgc
     1381 ctcaaaacct tctctcgtat agagcgggaa gatatcgggc cggctcagca ggagacgctt
     1441 gacctgggaa tctgccttgg ggacaaactc gatgatgagc ttgcgcccga gccgcgaaaa
     1501 ataggaggcg acccgctcga gagggagatt attcccgatg gccaagtgat ggatcagcgc
     1561 gagtgccatg acggtatcgg ctggcccccg ttgctccagc gacaaccgct cccgacccgc
     1621 ccagccgagc gccggcgagg ggttcgtcag atccagcaac agcggcagga tgccgctctc
     1681 ctggttcgac ttggcacgct gatagtttcg ctccaccgcc gccggatcaa catcgaatga
     1741 aaccacgagc ggggcaatct cacgggccgc acggctgtat tccccagtgt tggcgccgag
     1801 atcccagacg ctatggggtt gagagcgtcg caagaaggcc tggacggtat cccgcttgga
     1861 tcgcgccgcc gcctcgctgt agttgttgtc agtgacgtac tctgcccact cggtgcccgc
     1921 cgctcgccag gcaagtccct ggaccgcgct cttgaggttc ttgaccaaag tcagcaggcc
     1981 ttgccggctc atcgagcggc ctttggccgc cgtagtggtt acggctgacc cggcataacg
     2041 gctctgggcc caggcgtgca tgtgaatgtg aagcaatgtg ctgaggccga gccaggtgcg
     2101 gcggggcaga agacggctgc cgaaatcgag cggaattccg tcgatgtagg accggagcag
     2161 tgcctcgcag cgaatatcgc gggtgctcat caacgtgagg ggcaggagga agtgctcaca
     2221 aaactgctta tacgcagtcc agggttttcc ttcctccagc ggcgcgaatg aaagcgtatc
     2281 gatgaagact gggtgtccac cccggaactg aacgttgtac gagctgctgt cccggagagt
     2341 gaaccctcgg ccaatcgcac gttcctgaat cgtgagcgtg agaagggcgg cgtccttgag
     2401 ctggccgaac gaccactcat agggatagga gatgaactcg atgcgatccg gctggaggac
     2461 tgcgtgggcg tcgtcgtttg ccgcggactc gagcccgact tggcggtggg ctaccagcaa
     2521 gccatcacgc gcaagctcct cgtacaaacc cgacgcgata aacgcgtcga attcctgggc
     2581 gaagctgcga ttgacttgac ggtatagggt gccgtcccgg gtatagacaa atccgcttgg
     2641 atcccggaac gagccttcga cgacttgcca gttcaccgac gtttgcgggg cagcaacatc
     2701 ttgaagaagg atttaacggc ctcgcgtacc cgagacgcca tggcaactac cgagagcacg
     2761 ccggcagcaa ggaactgaag aaccagactt ccggtggtgg ggtcgatgta catgtgcggg
     2821 cgaccggaac gagtgatagg gggacgatcg ggccacggaa tcgtaacgtt tctgtagtgg
     2881 agggcaatag caagaaacga tcctggcagc aaggcgagtt ggtccttgct ggactgcaac
     2941 ttagactctc tcgctactcc gattccgaga gtcgaggcgc cggttccgca ttatcgttgt
     3001 cctgaatcca caccgttttg atgttcacga actcccgaag accctggtag ctcagctccc
     3061 ggccatagcc ggactgcttc acaccgccga acggcacccg ggggtcggac gcgaccatgg
     3121 cgttaatgaa gaccatcccc gactccaact cggccacgaa ccggtcccgc tcggtgggat
     3181 cccgtgtcca ggcgctggcg ccgaggccga agtcgctgtc attggccagc tgtatggcgg
     3241 tatccgcatc cttgacccgg aacaacaaag cgaccggacc gaacacctct tcccggtatg
     3301 ccggggaatc tttggtgatg cccgtcacca cccccggagc gaagtagcag ccggggcgat
     3361 cgagccgata cccacccact agaagccgag cccctgcctg gactgagcgg gccagctggt
     3421 cttccagcgt cttgacctgc gcctcattgg ccaatgggcc gacgtctgtg tttggatcca
     3481 tcggatcgcc gaccaccaga gattggattc ccgctaccag gcggcgctcg aattcatcgg
     3541 cgatcggctc ggccacgata aaccgtttgg ccgctataca ggactggccg ttgttgatgg
     3601 tccgtgcctt gactgcagtg cgagccgccg cgtcgaggtc ggccgttggc atgacgatga
     3661 acgggtcact tccgcccagc tccagcactg ttttcttgat ctgcttcccg gcagtgctgg
     3721 cgacgtgact ccccgccccg gtgctcccgg tcagcgtcac agctgatacc cggtgatcct
     3781 cgattacccg gcgaacccga tcagtctcga tcagcagtgt ctggaaacag ccttcaggaa
     3841 aacctgctcg ccggaagatg tcctcgatgg cgagggcgca ctgaggcaca ttggaggcgt
     3901 gcttcagaag tcccacatta ccggccgcaa gggccggagc ggcaaaccgg aacacctgcc
     3961 agaacgggaa attccagggc atgatcgcga gaatcggccc gatcggttga taggtgacaa
     4021 agcttctctt tgcgctggtc tccacgacct gatcgctcaa gaactgttcc gcatgctccg
     4081 cgtagtagcg gcagcccaag gcgcacttga ccgcttcctc gactgcggcc ttaaacgttt
     4141 tgcccatctc ggtcaccatg aggcggccga acttctcctt ttccgattcg agaatctccg
     4201 cggcacgagt gagccggcgg gtacgctcag ccaagggcgt agtccgatag cggcggaacg
     4261 tttcggccgc gcattgcagc ttggcgtcga gatcggcctc tgacagtggt acgaaggtgc
     4321 gtacggtctg gccggtggcg ggattcacga tggctattgt catacgcttc agcgatcctg
     4381 ggcggggtga accgcgcaag tattcaacat cgcgctataa tccctgtcta tgcgagcact
     4441 caatgaactg cttcacgcca gtatcgacta tgccgggctc tttccgcctg ctcagttgga
     4501 catgacgaca gcggtcgaga actatgcccg ttatctggcg agcgacagtg cctgggcgct
     4561 gggtcgattc attgttcccg cggcgcaact ccccgaattg gcagaagcag cccaacgttt
     4621 tcgggccgac ccggccggca ctccctggtc cattgcggct cttgccggca gcaaccgcgc
     4681 cggggatcag gaccacattc gacggtttaa cgccgctcac actgcccgag gtcaggtcga
     4741 taccctggag ctgaaagcta gctccaccgc ggaaattcac cgcagcatgg cagcgatacc
     4801 ccggcagttg caagtatacg tggagattcc gatcgacgaa gatccggcaa agctcatcga
     4861 ggaaattgga cgtcgtggcg cgcgggccaa ggtgcggacc ggcggcgtga cgcgagatgc
     4921 cttcccctcg ccggcacagc tggcgcgctt tatg
//
LOCUS       DASRPQ010002036         1128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3708699, whole genome shotgun sequence.
ACCESSION   DASRPQ010002036 DASRPQ010000000
VERSION     DASRPQ010002036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3708699"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(9..659)
                     /locus_tag="VFD73_23110"
     CDS             complement(9..659)
                     /locus_tag="VFD73_23110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76868.1"
                     /translation="MTQPPQAPDVFTREERRIIERYRTPEQVQQFLRRLPYNWELGGD
                     TLRSFRQVVRHNTAHCLEAALVAAVILEQHGYPPLVLSFESKDGVDHVIFVFRREGRW
                     GSVARSRDAGLHGRKPVFRGIRDLVWSYFDPYVDFTGRITGYQLVDLRALGKYDWRLA
                     LTNIWKVENYLLEIPHRKLRSSNRRYLRLLARFRAYRERHPSDPVIEIYRNRERWM"
     gene            complement(701..>1128)
                     /locus_tag="VFD73_23115"
     CDS             complement(701..>1128)
                     /locus_tag="VFD73_23115"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HZI76869.1"
                     /translation="AKLDMVRSIGADHVIDYTREDVTQKGQLYDLVLDVVARRSMWEW
                     RRVLKPGGAYVMLGASTGLLLQGTFLGPLISMMGSRKTAVMWWWKPFKQEDVAFLKDL
                     IQGGSLVPVIDRRYPLSGLPDALRYLEEGKARGKVVITV"
BASE COUNT          209 a          375 c          342 g          202 t
ORIGIN      
        1 atcgcccgct acatccagcg ctcacggttc cgatagatct cgatcaccgg gtcgctggga
       61 tgtcgctcgc ggtatgcgcg aaaccgcgcg agcaagcgca ggtagcggcg attcgacgac
      121 cgcagtttgc ggtgcggaat ctcgaggaga tagttctcga ccttccatat gttcgtcagg
      181 gccagacgcc agtcgtactt gcccagcgcg cgcagatcca ccagctggta gccggtgatg
      241 cggccggtga agtccacgta tggatcgaag tagctccaca ccagatcgcg aatgccgcgg
      301 aacacaggtt tccggccgtg caggcccgca tccctggatc gggccaccga gccccaccga
      361 ccttcacggc gaaacacgaa gatcacatga tccacgccat ctttggactc gaagctgagc
      421 acgagcggcg ggtagccgtg ctgctccaga atcacggctg cgaccagcgc cgcctccagg
      481 cagtgcgcgg tgttgtggcg gacgacctgg cgaaaggatc ggagggtgtc gccgccgagc
      541 tcccagttgt agggcagcct gcgcaggaac tgctggacct gttcaggcgt gcggtaccgc
      601 tcgatgattc gccgctcttc gcgggtgaag acatccggcg cctggggcgg ctgggtcatg
      661 ggccgactat tttccaacga ccgaccgagc cggcgaaacg tcacacggtg atgacgactt
      721 ttcctcgggc tttaccttcc tccaggtacc ggagagcatc cgggagcccg ctcaacgggt
      781 agcgtctgtc gatgacgggc accaaactgc cgccctggat caggtccttg aggaaggcca
      841 cgtcctcctg tttgaacggt ttccaccacc acatcacggc cgtcttcctg ctgcccatca
      901 tcgagatcag cggtccgaga aacgtccctt ggagcagcag cccggtggag gcgcccagca
      961 tcacgtaggc tccgcccggt ttcaacaccc gcctccactc ccacatcgaa cggcgcgcca
     1021 cgacatccag gaccaggtcg tacagctggc ccttttgggt cacgtcctct cgcgtgtagt
     1081 cgatcacgtg gtccgcgccg atcgaccgca ccatgtccaa cttggcgg
//
LOCUS       DASRPQ010002037         2525 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3406819, whole genome shotgun sequence.
ACCESSION   DASRPQ010002037 DASRPQ010000000
VERSION     DASRPQ010002037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2525
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3406819"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(133..501)
                     /locus_tag="VFD73_23120"
     CDS             complement(133..501)
                     /locus_tag="VFD73_23120"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI76870.1"
                     /translation="MAQNILVVDDEAVARRFLERALTEQGFRVMLACDGEEALDLIRM
                     TRRKIALIITDLVMPGMGGHAFALEVGRLPSPPPILYISAYESPEGEMAKRFLHKPFS
                     IEDLLTAVRNLITPPQEVRS"
     gene            complement(598..1677)
                     /locus_tag="VFD73_23125"
     CDS             complement(598..1677)
                     /locus_tag="VFD73_23125"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI76871.1"
                     /translation="MRILHLAKYYWPRSGGMERVVQTLVEGAANLGHHVEVVAIESRG
                     WSTPGVRQRAPVTRAFSFAALGSQEIAPGYIAAAWKRADIIHVHHPHPLADIACLLRA
                     GNTPVVVTQHADALRSIYRPATRLVIRRSSAVVVPSRAHLALSQELRGFENKVEVIPF
                     GIDQTRWRVVPPPPPGAAPRAIFIGRLVAYKGLDILLRALEQVPDLRLDIVGSGPEGP
                     RLRTLAQALAVTDRVRWYGEYPDDDLPRRMADADFLVLPSVTVEEMFGLVVLEAMAAG
                     RPVITTALPSAVREVNVPGVTGLEVPLRDVSALARALELLSRDASRRQTMGEAGRKRV
                     AERFTQSAMAEKHIALYQRVLAAGS"
     gene            1825..>2525
                     /locus_tag="VFD73_23130"
     CDS             1825..>2525
                     /locus_tag="VFD73_23130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76872.1"
                     /translation="MRAAIVSHLYADPANRAKLHSLAGLGVSLTVAVPDRWAANDGRT
                     QRTVGDEASGVRVVPVSVRGGVADPPRLQWDPKTLRALLSDSRPDLVHIEEEPWTQPA
                     AVSLRLARRLGIRSVLSTAESLPRGYTLRQRFRRDRNLRLANGIIGANRLALSFATTR
                     RQTVPHIVLPQIGVTPPSPLPKVDHPGLALGFVGRLVPERGLDLLFRACVSLAGKWTL
                     SVIGTGPSQEELESLA"
BASE COUNT          483 a          806 c          799 g          437 t
ORIGIN      
        1 agccgcggcc cgacgtgaaa acgaccaccg tggtctatag ccgacacgga ccaggcaaaa
       61 cagcgtccag gtagccacga ggtcggtgtc caacctagag gagtctattt ttgtggagat
      121 aggaagagag gtctacgagc gcacttcctg aggtggggta atgaggttgc gcactgcggt
      181 cagcagatcc tctatcgaaa acggcttgtg caggaagcgc ttggccatct cgccttccgg
      241 gctctcgtag gccgagatgt agaggatagg cggaggtgac ggcagccggc ccacctccag
      301 ggcaaaggca tggccgccca tgcccggcat cacgaggtcg gtaatgatga gcgcgatctt
      361 ccgccgggtc atgcggatca ggtcgagggc ctcctcgcca tcacaggcaa gcattacccg
      421 aaaaccctgt tccgtcaggg ctcgttccag gaatcgccgg gcgacagcct cgtcgtccac
      481 caccaggata ttctgcgcca tccttttccc cagcctaggc caatggagaa gtcgggcagc
      541 ccggcttctt gccaaaaatc atagactagt ttgagcttgg caaccgcggc gagaggttca
      601 gcttcccgcg gcgagcactc gttggtaaag cgcgatatgc ttttccgcca tggcactctg
      661 ggtgaatcgc tccgccaccc gcttgcgccc ggcttcaccc atcgtctgtc ggcgagaggc
      721 atcccggctc agcagctcga gtgctcgggc gagcgccgag acatcacgca acggaacttc
      781 caagccggtg accccgggaa cgttcacctc tcgtacggcg ctggggaggg cggtcgtgat
      841 taccgggcgg cctgcagcca ttgcttccag cacgacgaga ccaaacatct cctcgaccgt
      901 cacggacgga agcaccagaa aatcggcatc cgccattcgg cgtggcagat cgtcgtcggg
      961 gtactcgccg taccagcgta cccgatcggt gacggccagc gcctgggcga gagtccggag
     1021 ccggggccct tccggtcccg agccgacgat gtcgagacga agatccggaa cctgctccag
     1081 ggcgcgaagt aggatgtcga gacccttata cgcgaccagc cggccaatga agatcgcccg
     1141 cggagccgcg ccgggcggcg gcggcggcac cactcgccag cgagtctggt cgataccgaa
     1201 tgggataacc tcgaccttgt tctcaaaccc tctcaactcc tgagagaggg caaggtgagc
     1261 tcgactggga acgaccaccg cactggatcg tctgatgacc agccgagtcg ccggccggta
     1321 gatggaacga agggcatcgg cgtgttgggt cacgacaacc ggtgtattgc cggcccgaag
     1381 cagacaggcg atatcggcca gcggatgggg atgatgcaca tggatgatgt ccgctcgctt
     1441 ccacgctgcc gcgatgtaac ccggcgcaat ttcctgagac cccagagccg caaaggaaaa
     1501 tgcgcgagtg accggtgccc gctgccggac gcccggagtg ctccaccccc ggctctcgat
     1561 cgcaacgacc tctacgtgat ggcccaggtt ggcagcgccc tcgactaacg tctgaacgac
     1621 acgctccatg ccccccgatc ggggccagta gtacttcgcc agatggagta tgcgcatagt
     1681 cgagaacaca cctcgctgct tgctaggggc ccttcgatct atattgtcag gcggtttggc
     1741 aacttcaccg gcatcccaat cgctgtcaac caaaactcat cgcggacaga ctcgtgaaca
     1801 tctccggacc cgcggcgcgc tgacgtgcgg gcggccatcg tctctcatct ctacgccgac
     1861 ccggcgaatc gcgctaagct gcattcgctg gcagggttag gcgtgagcct gacggtcgct
     1921 gtgccggacc ggtgggcggc caacgatgga cgcacccagc ggaccgttgg ggacgaagcc
     1981 agtggcgtgc gggtagttcc ggtgtccgtc cgcggtggcg tagcggaccc tccgcgattg
     2041 cagtgggacc ccaaaaccct gcgggccctg cttagcgata gtcgcccaga cctggtgcac
     2101 atcgaggaag aaccctggac ccagccggca gcggtgtcac tgcggctggc ccgacgcctg
     2161 ggaatacgca gcgtcttatc cactgcagaa agcctgccgc ggggctacac gctgcggcaa
     2221 cggtttcgcc gggaccggaa tcttcgattg gcaaatggga tcatcggcgc caaccggctc
     2281 gcgttgtcgt ttgcgacgac gcggcggcag acggtgcccc acatcgtgtt gccgcagatc
     2341 ggggtcaccc caccgtcgcc tttgcccaaa gtggatcacc ccggcctcgc cctggggttt
     2401 gtcggacggc tggtgcctga gcgggggctg gatctgctct ttcgcgcatg cgtcagcctg
     2461 gccggaaagt ggactctctc tgtgatcgga accggtcctt cacaggagga gctcgaatcg
     2521 ctggc
//
LOCUS       DASRPQ010002038         1112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3709370, whole genome shotgun sequence.
ACCESSION   DASRPQ010002038 DASRPQ010000000
VERSION     DASRPQ010002038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3709370"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(436..585)
                     /locus_tag="VFD73_23135"
     CDS             complement(436..585)
                     /locus_tag="VFD73_23135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76873.1"
                     /translation="MLRWLKTVVVSDEEKARLTGQAGTGKASVSEPLMTCRDQEDGIR
                     TGASQ"
     gene            complement(675..821)
                     /locus_tag="VFD73_23140"
                     /pseudo
     CDS             complement(675..821)
                     /locus_tag="VFD73_23140"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          200 a          406 c          285 g          221 t
ORIGIN      
        1 ttcctccagg gactgcctgt ccactcccgg cgcacccttg ttcgccttga cccgtctata
       61 cgcctcccac acgagctgct tcggtatccc gaacggcttt tcctgcgact tcgacctgct
      121 cacgtgtctc ctcccaggga cagcaccccg gtttcccatg cgaacaaatc cagatgagcc
      181 ggccccttcg ctccaccccc attacaggag cttcagcact aatacgagcc ggtccgccgg
      241 caagtgccgc gacagtactc aacgcctcca gtttcggctg tccagcgcgc tccctctcgc
      301 acccggcacc accgggcaca gtatcggcac tcgccttccc gcgttccatg cgaaagccgc
      361 agaccgggct cgcgccgcct tcatgccggg caccgcctgg ccagtaaacg ggcatccgcc
      421 aggcttatcc cggagctact gggatgcccc ggttctgatg ccatcttcct ggtctcggca
      481 cgtcatcagc ggttcgctca cgctcgcctt cccggtcccc gcctgacccg tcaaccgggc
      541 cttttcctca tcgctcacca cgacggtctt cagccaacgc agcatgaggc ggcttgacgc
      601 ctccccccgc agggcgacgc cagggagcca gcaattcccc atctctcgca cagcaccgcg
      661 aatcaatcgc cttgctaccc cagacgacct cctcgcgttc gcggcacacc ccagttcccc
      721 agggtgccct cgttgatcct cagatccttc gcgacctgcg cgaccgggcg actggtctcc
      781 cggactagcc ggacaacgcc ctccttgaag tccacgtcgg acttcctgcg tgtccctgcc
      841 gtcgccgtcc tcttttaagg cgatatgtcc acgctacgag ggaaacccgg cacaagattg
      901 ggcggatttg cccggctgtg gttgatgtgt agcacagtgg tattacctga tgtgttacag
      961 agtccgatgc catgaaaccg cgctctgtca ctgaagcggt cgggactgcc agagatccgc
     1021 gacaagatag gtgatcgcat ggaacgtcaa tcgagaaact ctgatacaga ttacgacgag
     1081 ccgctggaat atagcggatg attctgggta aa
//
LOCUS       DASRPQ010002039         1132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1171394, whole genome shotgun sequence.
ACCESSION   DASRPQ010002039 DASRPQ010000000
VERSION     DASRPQ010002039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1171394"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..513)
                     /locus_tag="VFD73_23145"
     CDS             complement(<1..513)
                     /locus_tag="VFD73_23145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZI76874.1"
                     /translation="MKSGAEKSHSLIVPAKPANKAAQSAAELVEGSGGTERNAGLQRT
                     VRTQSREAVSQAQARIREAVNRNKGEKLTALLHHISLDCLRWAFFTLKKDAAPGVDGL
                     TWEQYAADLDRNLTDLHARVHTGAYRAQPSRRKFIPKPDGRQRPLGIAAREDKIVQAA
                     VVAILTPIYEA"
BASE COUNT          166 a          406 c          324 g          236 t
ORIGIN      
        1 cgcctcgtag atcggcgtga ggatcgccac caccgctgcc tggacgatct tgtcctctcg
       61 agcagcgatg ccgagcggcc gctgtcggcc atcgggcttc gggataaact tccgccgcga
      121 cggctgcgct cgatacgctc ccgtgtgaac gcgcgcgtgc agatcagtga ggtttcgatc
      181 aaggtctgcc gcgtattgtt cccaggtcag accgtcgacc cccggtgcgg cgtccttctt
      241 cagagtgaag aaagcccagc gcagacagtc gaggctgata tggtgcagga gtgctgtcag
      301 cttctcccct ttgttcctgt taacggcttc gcgtatgcga gcctgcgcct gtgacacggc
      361 ttcccggctc tgggttcgga ccgtgcgttg cagtcccgca ttcctctcgg tcccaccgct
      421 tccctccacc agctccgcag cggattgcgc cgccttgttc gccggcttcg caggtactat
      481 cagtgagtgt gacttctccg ccccgctctt caccggctat ggcctccggc cttcccgatg
      541 cggccctgag gacggctccc cagggcggtg acggagacct cccggttccc acgcaggaga
      601 cgtacgtaca tgccagggtc tcagacgacg cggggtggca cgggtcctcg caatgacggt
      661 cccatgcctg ttgccttctg ctgccacgac ggcatcggca ccccgaacga cattgctttc
      721 gccgctccat acctggccta tacgcacccc tgtcaacgct tcgcctgcgg cctcgcagcc
      781 gcctacgcat gactcggggc cggtgtgggt cgctacccct tcaccgtaac ggacttgcac
      841 cttctacctc ctgccggtct cccggcgcac cgcggctcaa tggctggcct atacgctccc
      901 ctaccgacgc ttcgcagtca tcctcgcgga tggctgcgca cggatcgggg gcgacgtggg
      961 ctgctactcc ttcatcgcag tggactctca ccacatactc cttgccggtc tcccggcgca
     1021 ctcactcgcg ttgcggcctg cacactcgca cggtcaccgt atgtcgtgac cgctatccga
     1081 aggcttcgaa taacgggctc atcaggtatc gcttgaccgc caggcggatc aa
//
LOCUS       DASRPQ010002040         1175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_547099, whole genome shotgun sequence.
ACCESSION   DASRPQ010002040 DASRPQ010000000
VERSION     DASRPQ010002040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_547099"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            187..780
                     /locus_tag="VFD73_23150"
     CDS             187..780
                     /locus_tag="VFD73_23150"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HZI76875.1"
                     /translation="MRWPAGVYSEVGGSATAQRAATRELLRNSLLAGAGIVMLLWLAF
                     GESSRLLLVLANLPFALVGGVLAVFATGGLLSLGSLVGFVTLFGIATRNAVMLISHYD
                     HLVRAEGRRWEHETALQGAQERLGPILMTALVTALALLPLALGSGDPGREIEGPMAIV
                     ILGGLVTSTVLSLFVLPTLALRYGKLERTLERDDLRP"
     gene            complement(770..>1175)
                     /locus_tag="VFD73_23155"
     CDS             complement(770..>1175)
                     /locus_tag="VFD73_23155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76876.1"
                     /translation="TMLPDLEERTLLLLMVFVCLPPINLLSMLIQNGAALLFPAWVKL
                     GSGRMAGVEALGQNLLMMLAFLGLLSVTLVVPAILGGGGYLLLRSVLNDWALIPAVAV
                     ALTIVGFEAALMVHWLGHVFERTDPATAGITA"
BASE COUNT          214 a          358 c          384 g          219 t
ORIGIN      
        1 aggctcccca tcgtgtcatc taacggacgc ctggtggaat tgggacagat tgctgatgtc
       61 gcccgaacca ccggacgttc gctgatcgcc cacgtgggcg cgcgtcgggt ccagacggtt
      121 acggcaaaca tccggggcag ggatcccgag agcttcactc gctagtggga gaaccggctg
      181 cgaagcctgc gctggccggc tggcgtatac tcggaggtcg gggggagtgc caccgcacag
      241 cgtgccgcca ctcgggagtt gctccgaaac agtctcttgg ccggcgcggg aatcgtcatg
      301 ctgctgtggc tggcctttgg cgagagcagc cgtttgctgc tcgtgctcgc gaacttgccc
      361 tttgctctgg tgggcggcgt gctggcggtc tttgccactg gcggccttct cagtctcgga
      421 tctctggtgg gcttcgtgac cttgttcgga atcgccactc ggaatgccgt catgttgatt
      481 tcccactacg accacttggt ccgagccgaa ggccgacgct gggaacatga gacagcgctg
      541 cagggagccc aggagcggct ggggccaatt ctgatgacgg cgttggtgac ggcacttgcc
      601 ttgttgccgc tggcactcgg gagcggggac ccgggccggg agatcgaagg cccgatggct
      661 atcgtgattc tgggtgggct ggtcacctcc acggtgttga gcctgttcgt tctgccgacc
      721 ctggctctgc gctacggcaa gctggagcgg acactggagc gggacgacct caggccgtaa
      781 tccccgcagt agcagggtcg gtgcgctcaa agacgtgtcc cagccaatga accatcagtg
      841 cagcctcgaa tccgacgatt gtcagggcca cggcgaccgc tggaatcagg gcccagtcgt
      901 tgagaacgga acgaaggagc aggtacccac ccccgccgag aatggccggc acaacgagtg
      961 ttaccgatag gagccccagg aacgccagca tcatcaacaa attctgcccc agtgcttcca
     1021 ctcccgccat ccggccggag cccagcttca cccaggcggg gaagagcagt gcagctccat
     1081 tctgaatcag catgctcaac aggtttatcg gcggcaggca cacaaatacc atgagcaaga
     1141 ggagcgtccg ttcctccagg tcgggcagca tcgtt
//
LOCUS       DASRPQ010002041         1004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3407725, whole genome shotgun sequence.
ACCESSION   DASRPQ010002041 DASRPQ010000000
VERSION     DASRPQ010002041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3407725"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..534
                     /locus_tag="VFD73_23160"
     CDS             <1..534
                     /locus_tag="VFD73_23160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI76877.1"
                     /translation="YNRETLQVKFKGYSIADMLDATVEEALPLMENLPQIRAKLQTLN
                     DVGLGYVHLGQSSTTLSGGEAQRIKLAKELSKRQTGRTFYLLDEPTTGLHFDDVRKLL
                     DVLQRLVELGNTVVVIEHNLDVVKTADWIIDLGPDGGEYGGRVVACGTPEQVARSKKS
                     YTAEALRKVLHNGAAAS"
     gene            complement(587..>1004)
                     /locus_tag="VFD73_23165"
     CDS             complement(587..>1004)
                     /locus_tag="VFD73_23165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZI76878.1"
                     /translation="LIPLIPSRAADRPDPKLVTIKLPDEIQWRKSEANDQATIQGDPT
                     KPGIYIQLIKWHPGHMSRPHFHAEERYIWVISGTWWVGTGPHYDPNQTYPVPAGSYVV
                     DRPGEIHWDGAKPETGDCLLEIVGMGPSKTTQAEEK"
BASE COUNT          188 a          303 c          332 g          181 t
ORIGIN      
        1 tacaaccgcg agacgctgca ggtgaagttc aagggctatt ccatcgccga catgctggac
       61 gcgaccgtgg aggaggcgct gcccctgatg gaaaacctgc cgcagatccg cgccaagctg
      121 cagaccctga acgacgtcgg cctcgggtac gtgcacctcg gccaatcgtc caccacgctt
      181 tcgggcggag aagcgcagcg gatcaagctg gcaaaggaac tgagcaagcg acaaacgggc
      241 cgcacgtttt acctcctgga cgagccgacc accggattgc acttcgacga cgtccggaaa
      301 ttgctggacg tgctgcagcg gctggtggag ctgggcaata ccgtcgtggt catcgagcac
      361 aacctggacg tcgtcaagac tgccgactgg atcatcgatc tggggccgga cggcggcgag
      421 tacggcggcc gggtggtggc gtgcggcacg ccggagcagg tggcgcgctc gaagaaaagc
      481 tacactgccg aggcgctgcg caaagtactt cacaacgggg cggcggcgtc ctaggcccta
      541 tccgctccgc ggaggccgcg gttctgtggc ggacaccgga cgaaagctac ttttcctccg
      601 cctgcgttgt cttcgaggga cccatgccga cgatttcgag caggcaatca cccgtttcgg
      661 gtttggcgcc gtcccagtga atctcgccgg gacgatccac cacatagctg cccgccggca
      721 cggggtaggt ctgattcgga tcgtaatggg gcccggtccc gacccaccat gtccccgaga
      781 tcacccagat ataccgctct tcggcgtgaa agtgcgggcg gctcatgtgc cccggatgcc
      841 acttgatgag ctggatgtaa atgccgggct tggttggatc gccttggatg gtggcctgat
      901 cgttggcctc ggactttctc cattggatct cgtcaggcag cttaatggtg actagcttgg
      961 gatcaggccg gtccgcggcg cggctgggaa tcagcggaat cagg
//
LOCUS       DASRPQ010002042         1564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1832138, whole genome shotgun sequence.
ACCESSION   DASRPQ010002042 DASRPQ010000000
VERSION     DASRPQ010002042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1832138"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(122..550)
                     /locus_tag="VFD73_23170"
     CDS             complement(122..550)
                     /locus_tag="VFD73_23170"
                     /inference="COORDINATES: protein motif:HMM:NF013252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76879.1"
                     /translation="MPLSRGRVRDPLVAWEREQPQRLIQQSFRYAQSEPQLNQAHAAI
                     EERLLADTKPLEYRFDYQRGQPAALDPMQATQVATPFHRPGWVYEEKVDGYRMVAYKV
                     ASSVQLLSRQGKEFTQRFLDLAKAVASLGAESAILSSIRP"
     gene            988..1191
                     /locus_tag="VFD73_23175"
     CDS             988..1191
                     /locus_tag="VFD73_23175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76880.1"
                     /translation="MSLSCVHQAHGLDRLSYSTPKRRFYLVHRGRWFPLAQHGDMIAT
                     LKSNSHGQAITDPQDIRQDTFTP"
BASE COUNT          278 a          503 c          512 g          271 t
ORIGIN      
        1 agcgaagacg atcttgagac gtttgaaggc tggttgaagt atcagcgctt caccccggcg
       61 acgccagagg aagaatcgga gatgcggcga gtcttcgagg aggggaggaa gcagcgcgcg
      121 tctaaggtcg gattgatgaa aggatcgctg attcagcgcc aagcgaggcg acggccttcg
      181 ccaggtcaag aaagcgctgc gtaaactcct tgccctggcg gctgagcagc tggactgagc
      241 tagccacctt gtaggcgacc atccgatagc cgtctacttt ttcctcatag acccatcctg
      301 ggcggtggaa cggggtggcg acctgggtgg cctgcatggg gtcgagagcg gcgggttggc
      361 ctcgctgata gtcgaagcga tattccagag gctttgtatc cgccaacaag cgctcttcga
      421 tcgcagcatg agcctggttg agctgcggct cgctctgggc gtaacggaag ctctgctgaa
      481 tgaggcgctg tggctgctca cgttcccagg caacaagcgg atcacgtacc cgaccccggg
      541 acagtggcac tgggcccgga gtggcgggaa cgttgcgagc ggcaggaagc gccgccagcg
      601 gagactggaa gcaccgggcg gcagccgaga cgcccggaat cgcccgacgg ggagggagcg
      661 ccctcttgag ctcgcccctt tgggctcaaa aaactccccc gacccgtgcg ctagcgcgga
      721 gccagttcgc gccacgatcg cccgctgagc cctacttcgc gctcgatcag tccggcctct
      781 caggctttcg cctagacgac cctggccggc tttgacgctt ctcgcactcg acgtgcgtgc
      841 tagtcaaccc gcgtcgcgtc cgcccagcgc cgggcaagat tggcctgcgg cagaccgagc
      901 agatcgggtt tggacgcggt tggcgactca tagcggccct ccctgtcagt acccgtgatg
      961 gtctggggtc agcggcccct gaggggattg tccctctcgt gtgtccacca ggcccacggc
     1021 ctggaccgtc tgtcctactc cacgccgaag cgccgcttct acctcgtcca ccgtgggcgg
     1081 tggtttccac tcgcccagca tggcgacatg atcgcgaccc tcaagtcgaa tagtcacgga
     1141 caggcgatca ccgatccgca ggacattcgt caggacacct tcacgccgta acttcgccgt
     1201 gtcgcggagc tcactgccgc ttcccacggg gggccagatg aacgaacggg acccggcccc
     1261 cttaagatat cggaggagca tcagcccaag acgaggcacg cgctgcaccc gcccaagaaa
     1321 ttacaaaccg gccggacgcc aggcgatggg ccgggcgaat cactgggact tcgaggcggc
     1381 gccggcggcg ggcggttcgc acgggtaccc cgacttgtcc agccctccct ctccggggca
     1441 tgggatgttt cgtcccggta ctgatgggtg aacgggcttg gccgtctctg tgttcgtgcc
     1501 gctgctcccg cgtgaccctt ccggccgatg gcaggctgac gcgccaacga gacataggcc
     1561 ggtc
//
LOCUS       DASRPQ010002043         1016 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4632132, whole genome shotgun sequence.
ACCESSION   DASRPQ010002043 DASRPQ010000000
VERSION     DASRPQ010002043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4632132"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            219..839
                     /locus_tag="VFD73_23180"
     CDS             219..839
                     /locus_tag="VFD73_23180"
                     /inference="COORDINATES: protein motif:HMM:NF018452.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1214 domain-containing protein"
                     /protein_id="HZI76881.1"
                     /translation="MSQTARPSALSRLTVVLVVVTGVIVGAVLALGTAIVLITTEVPA
                     MQTTVNGWSSTMTCGQAGNGPRVRAACALAFFAVNLPEEAVYWTATVDGAGQPLTGAH
                     DYRLHFPPGGLPPTNAFWSLTMTIAPGYLVANPSNRYSVGDRSGLVPNADGSLDLYIQ
                     NQAPAGHEANWLPAPSGDFKLWLRAYQPGAAILNGAYHVPPLVEVR"
BASE COUNT          174 a          345 c          302 g          195 t
ORIGIN      
        1 cacgggcgtc gtcgtgctcg tgctggatgt tgtcaggacc attattgggt acttcatctc
       61 gggattcggt gtcaccgcga tcatcaccga cgtgattgcc ctcctgctgc tctggtatct
      121 cttccgcccg aacgtacgcg ccgccttcgg gaaggcggcc tagcttcctc atcttggcta
      181 tgacaacgtt cgcaaatcga gatgggaggt agccaactat gagccaaacc gctcgtccgt
      241 cggccctcag ccggcttacc gtcgtcctgg tcgtggtgac gggagtgatc gtgggggctg
      301 tactggcatt gggcacagcc attgtgctga tcaccaccga agttcctgcc atgcaaacga
      361 cggtcaatgg ctggagtagc accatgacct gtggccaggc cggcaacggc ccccgggtgc
      421 gcgccgcctg cgccctggct ttcttcgccg tcaacctgcc ggaagaagcg gtgtactgga
      481 cggccacggt ggatggcgcg gggcagccgc tcacgggagc gcatgactac cgcctgcact
      541 tcccgccagg cgggctcccg cccacaaatg ccttctggtc gctgaccatg accatcgcgc
      601 ccggctacct ggtggccaat cccagcaacc gctacagcgt cggtgaccgg tcgggcctcg
      661 tgcccaacgc tgacggctcc ctggacctct acatccagaa ccaagcgccg gctggtcacg
      721 aggcgaactg gctgccggca ccgagcgggg acttcaagct ctggctccgc gcctatcagc
      781 cgggcgcggc catcctcaat ggcgcgtacc acgtgccgcc tctcgtagag gtgcgctaat
      841 ggcgaacaat aacgacagcg acacgaccag ccaggagagc gcagcggtgc ccgcttcctc
      901 tgcttcctca ccggcagtca agacccgaag caggtggaag acccacctgc tcaccttcac
      961 cgtgaccgtc ctggttgtat ggggagtcgg cacctacgct ttcatctact tctttc
//
LOCUS       DASRPQ010002044         1057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4001135, whole genome shotgun sequence.
ACCESSION   DASRPQ010002044 DASRPQ010000000
VERSION     DASRPQ010002044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4001135"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(295..369)
                     /locus_tag="VFD73_23185"
     tRNA            complement(295..369)
                     /locus_tag="VFD73_23185"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(335..337),aa:Val,seq:tac)
     gene            complement(520..909)
                     /locus_tag="VFD73_23190"
     CDS             complement(520..909)
                     /locus_tag="VFD73_23190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76882.1"
                     /translation="MALPTRIKRLALVTAGMPLVAAMATVMFASPSLAASHPAKAVLT
                     VQGSSDHVYSTLAHGLHVRTRPTTAATAVAVLGAKGSEVTVNCFAVGSSVFGDSVWYH
                     IVKPLSGFVAGFYLDTGRDPAPGIGHC"
BASE COUNT          185 a          350 c          340 g          182 t
ORIGIN      
        1 gtgggcccct tggctgagct gatcggtcat cgcccgtcac gctccctgtc accaggtaac
       61 cgctcggcta ggcgctcccg gcaaccagcg cctggcgcgt agcctaacgc ccggtggtta
      121 acgaccgatg accacatgcg gttgctccac caatgggaga tcagctcacg gttgcgcggc
      181 cagcgtgacc gtcacggttg ccggctctgc gcctcgatca cctgcatgat caggcattat
      241 gcggcccgaa ggggcgaagg tgatcttcga tcacccacat aatgcactaa acgttggtgg
      301 gcgcacctgg atttgaacca gggccaaccc gcttgtaagg cgggtgctct acccctgagc
      361 tatgcgcccg tgtccgcccc gtcgtggcgg ccgggcttag cgtaccgggt ccgcgcccag
      421 ccgataacac cgtggtgacc tgcccgtggc ccccgggtga agggctacgc gccgggacag
      481 cttgacgctt cctggtgctg gccgtgccgc gtgcgggggt cagcagtgac cgatgcccgg
      541 ggccgggtca cgcccggtgt cgaggtagaa gccggccacg aagcccgaca gcggcttcac
      601 gatgtggtac cagacgctgt ccccgaacac ggaactgccg acggcgaagc agttcaccgt
      661 cacctcgctg cccttcgccc ccagcacggc gacggccgtg gccgcggtgg tcggtctcgt
      721 gcgcacatgc aggccgtgag ccagcgtgct gtagacatgg tcggacgatc cctggaccgt
      781 cagaacggcc ttcgccgggt gtgacgcagc cagcgaaggg ctcgcgaaca ttacggtggc
      841 cattgctgcc accagcggca tacctgccgt gaccagagct agtcgcttga ttcgggttgg
      901 cagggccatg agcttcccct ctgcctgaat gcgagcccag cttgaccaat ggtaaagcga
      961 gatcgaattt ctgtccgcaa tgactgccgg acacgccgca gaagacttct cacgatctct
     1021 aggccggaaa tggggatggc aaagatagcc acgccgc
//
LOCUS       DASRPQ010002045         2915 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_548030, whole genome shotgun sequence.
ACCESSION   DASRPQ010002045 DASRPQ010000000
VERSION     DASRPQ010002045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2915
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_548030"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..399
                     /locus_tag="VFD73_23195"
     CDS             <1..399
                     /locus_tag="VFD73_23195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76883.1"
                     /translation="MPHGNTELFLVGAAVLIGVVGLIAGWRATLRRPILPADQAPADT
                     GFARVLNRKYYVDEIYDALIVRPLVWLSRMILWKGVDQGVVDGAAVNGSARLSQGLGW
                     LGSRLQTGQVGIYVVLFLVGAIWVLGVVVR"
     gene            404..1966
                     /locus_tag="VFD73_23200"
     CDS             404..1966
                     /locus_tag="VFD73_23200"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HZI76884.1"
                     /translation="MNQFLQSIAFDRWILHALILLPLAGVVPVLLGDERSAKRMALAV
                     TVIEFVLSLGLWWAYQPGQGGMQLLSSTPWIPRWGISYQVGIDGISLVMVLLTTAMMP
                     LSVLASWSSITRRERAFYALMLTLLTGLVGVFIALDLFVFYVFFEVMLIPMYFIIGIW
                     GGANRLYAAIKFFIYTMAGSLLMLVAIVVMVWKISATSGTLSFSYDHLLAHASTLGAA
                     APWLFAAFAIAFAIKVPVFPLHTWLPDAHVEAPTAGSVLLASVMLKIGTYGFLRFAVP
                     FFPQVALSPGVSRLIVILAVIGIIYGALVAMVQPDIKKLVAYSSVSHLGFVMLGIWGV
                     TLISVQGALMVMISHGISTGALFLLIGMIYERRHTRLIEDYGGIARVVPLFSLILTVV
                     ALSSIGLPGLNGFVGEFLVLLGSFGTYPWATGIATTGVIFAAAYLLWALQRMIFNSLD
                     KPDNERLTDLTPRELTVLVPLLAGIVWLGLYPGPVLRKMEPASRGFVETVQPALRTAQ
                     SGAAIPLPGVSR"
     gene            1963..>2915
                     /locus_tag="VFD73_23205"
     CDS             1963..>2915
                     /locus_tag="VFD73_23205"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HZI76885.1"
                     /translation="MIQLDTSTPQGITVALLPEVLLSGWALIVLLVASWRHGRPEDSR
                     LAGWLSFAGVAVSLAGVAWLWLNDATALGLAQMIALDPFRYAAAALILVCTGGAILLS
                     LGYLEREDLIAPEYYPLVLLAACGMLFLAGAEDLIVLFLGLEVMSVAIYVLAGYNRRS
                     PSSAEAALKYFLIGAFASGFLLYGIALTYGATGATNFSLIGAELAGGRLSLMAGLGLG
                     LLLIGLGFKVAAVPFHMWAPDVYDGAPTPVTALMATGVKAAAFVALVRLLLEGFPAAP
                     SLWQPVIAGLAIASMVVGNLIALAQRTLKRMLAYSSIAHAG"
BASE COUNT          410 a          886 c          943 g          676 t
ORIGIN      
        1 atgccccatg gcaacactga gctcttcctg gttggtgccg cggtgttgat tggtgtcgtg
       61 ggattgatcg ccgggtggcg ggctaccctg cgccgtccca tcctgccggc cgaccaggcg
      121 ccagccgaca ccggcttcgc ccgggtactg aatcgcaagt actatgtcga cgagatctac
      181 gacgcgctga tcgtcaggcc gctagtctgg ctctctcgca tgatcctgtg gaaaggcgtc
      241 gatcagggcg tggtggatgg cgccgcagtc aacggctcgg ccaggctctc gcaaggactg
      301 gggtggctgg ggagtcggct ccagacgggc caggttggga tctatgtggt gctgtttctg
      361 gtcggcgcca tctgggttct cggtgtcgtg gttcggtgac gcgatgaacc agttccttca
      421 atccatcgcc ttcgatcgct ggattcttca cgccctgatt ctgctgccgt tggccggcgt
      481 cgtcccagtg ttgctcgggg acgagcgcag cgccaagcgc atggcactgg cggtcaccgt
      541 gatcgagttc gtgctgtctc tcggactctg gtgggcatac cagccggggc agggagggat
      601 gcagctgctc tcgagcacgc cctggattcc gcgctggggc atcagctatc aagtcggtat
      661 cgacggcatc tcgctggtga tggtgctgct gaccacggca atgatgccgc tgagcgtgct
      721 ggccagctgg agctcgatta ctcgcaggga acgcgctttt tacgcgctga tgctgacgct
      781 gcttaccggt ctggtgggcg ttttcatcgc cctcgatctc ttcgtcttct acgtgttctt
      841 cgaggtgatg ctgattccga tgtatttcat catcggaatc tggggcgggg ccaatcgcct
      901 ttacgccgcc atcaaattct tcatctacac catggccggc tccctgctga tgctggtggc
      961 catcgtggtg atggtctgga agatttccgc cacgtccggc accctgtcct tcagctacga
     1021 ccatctcctg gcgcacgcct ccaccctggg cgcagcagcg ccatggctct tcgcggcgtt
     1081 cgcgatcgcc tttgcgatca aggtgccggt gtttccgctg cacacctggc tgcccgacgc
     1141 ccacgtcgaa gctcccaccg ctggaagcgt gttgctggct tcggtgatgc tcaagatcgg
     1201 gacctatggg ttcctccgct tcgcagtgcc cttctttccc caggtggcgc tgtcacccgg
     1261 ggtgagccga ctgatcgtga tcctggcggt gatcgggatc atctacggcg ctctcgtcgc
     1321 gatggtacaa cctgatatca agaagctggt ggcatactcc tcggtgagtc acctcgggtt
     1381 cgtgatgttg ggcatctggg gcgtgaccct gatcagcgtt cagggcgcgc tgatggtgat
     1441 gatcagccac ggcatttcga ccggggctct cttccttctt atagggatga tctacgagcg
     1501 gcggcacacc cggttgatcg aggactatgg cgggatcgcc cgagtggtcc cgctgttcag
     1561 cctgattctt accgtggttg ccctctcgtc gattggattg ccggggctga atgggttcgt
     1621 cggtgaattt ctggtgcttc tcggaagctt cgggacctat ccctgggcca ccggcattgc
     1681 gacgaccgga gtgatctttg ccgccgccta cctgctctgg gcgctgcagc gaatgatctt
     1741 caattcgctg gacaagcccg ataacgagcg gctcaccgat ctcacgcccc gtgagctcac
     1801 cgtcttggtt ccgttgcttg ccggcatcgt ctggctcggt ctgtaccccg ggccggtgct
     1861 caggaagatg gagccggcaa gccgagggtt cgtggagacg gtccagccgg cactccgcac
     1921 cgcgcaatcc ggcgccgcta ttccgctccc gggagtatcg cgatgatcca actcgatacc
     1981 agcacgcccc agggcatcac ggtggcgctg ctgcccgagg tgctgctctc gggctgggcg
     2041 ctgatcgttc tgctggttgc gagctggcgt catggccggc cggaggacag ccggctggcg
     2101 gggtggctca gcttcgcggg ggtggcagtg agcctcgccg gtgtggcatg gctctggttg
     2161 aacgatgcta cggcgctggg actggcacag atgatcgctc tcgatccatt ccgctatgcc
     2221 gcagcggcgc tgatcctggt ttgtaccggc ggtgcgatcc tgctttcgct gggatacctc
     2281 gagcgggaag acctgatcgc gccggagtat tacccgctgg tgttgctcgc ggcttgcggc
     2341 atgctgtttc tggcgggagc cgaggacctg atcgttctct tcctcggcct cgaggtcatg
     2401 tcggtggcga tctacgtgct cgccggctac aaccgccgca gcccttcgtc ggcggaagct
     2461 gctttgaaat atttcctgat tggcgcattc gcgtccggat ttctgctcta tggaatcgcg
     2521 ctgacctatg gagccaccgg ggcaacaaat ttttctctca tcggggctga gcttgccgga
     2581 ggccgcctct cgctgatggc cggtctcggt ctggggctgc ttctgatcgg tcttgggttc
     2641 aaggtggccg cggtgccgtt ccatatgtgg gcacccgacg tctatgacgg ggcacctacg
     2701 ccggtcaccg cgctcatggc gacaggggtc aaggctgcgg cgtttgtcgc gctggttcgt
     2761 ctgctactgg agggatttcc cgctgcgccg agcctctggc aaccggttat cgccggactg
     2821 gcgattgcct cgatggtagt cggcaacctg attgcgctgg cccagcgcac cttgaagcgg
     2881 atgctcgcct acagctctat cgcccacgcc ggata
//
LOCUS       DASRPQ010002046         1201 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1832599, whole genome shotgun sequence.
ACCESSION   DASRPQ010002046 DASRPQ010000000
VERSION     DASRPQ010002046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1201
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1832599"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..594)
                     /locus_tag="VFD73_23210"
     CDS             complement(<1..594)
                     /locus_tag="VFD73_23210"
                     /inference="COORDINATES: protein motif:HMM:NF021472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2189 domain-containing protein"
                     /protein_id="HZI76886.1"
                     /translation="MAHFHVIAGARETPEFPIVRRIAPADLKEALRKGFADFWTMPSQ
                     VFFLGLIYPIAGVILAGFSFGQNMLPLLYPLASGFALVGPFVAIGLYELSRRREQGLP
                     TDWKYAFEVLQSPAIGSIAALGVMLLVIFIGWLLTAQALYQGLYGYRPVESLPAFLSE
                     ALTTGRGWTLIILGNLIGFVFAAVVLAISVVSFPLLLD"
     gene            complement(795..1190)
                     /locus_tag="VFD73_23215"
     CDS             complement(795..1190)
                     /locus_tag="VFD73_23215"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI76887.1"
                     /translation="MRLWPFPRAKGEHTVEVLQRLRTEAPDRKLIVLWDGAPYHRAQA
                     VREAARTLDITLMPLPGYSPDLMPVEALWRWLREDVTYHHCHASADDLTRRVTEFEAR
                     LNRDPFVIADRLWVKDHLDPDEEKLRFSK"
BASE COUNT          240 a          367 c          395 g          199 t
ORIGIN      
        1 atccagcagg agcgggaagg agacgacgct gatggcgagc accaccgccg cgaacacgaa
       61 gccaatgagg ttgccgagaa tgatgagcgt ccagccgcgt ccggtcgtga gcgcctcgga
      121 gaggaaggcc gggagcgact ccacgggcct gtagccgtaa agcccttggt agagcgcctg
      181 cgcggtcagg agccagccga taaagatcac gagcaacatc acgccgagcg ccgcgatgga
      241 gccgatcgcg ggcgactgaa gcacctcgaa ggcgtacttc cagtccgtcg ggagcccctg
      301 ctcgcgtctg cggctcagct catagaggcc gattgcgacg aaggggccaa ccagcgcaaa
      361 gccggatgcc agcggataga gcagcggtag catgttctgg ccaaaggaga accccgccag
      421 gattacgcca gcaatcgggt agatcaggcc gaggaagaag acttggctcg gcatggtcca
      481 gaaatcggcg aagcctttcc tcagcgcctc tttgaggtca gcgggggcga tccggcgcac
      541 gatcgggaat tcaggggtct cgcgcgcacc tgcgatcacg tggaagtgcg ccatggcagt
      601 ccctccctgg aacactcagg tggccgcgat cctcagcgat gccgtgcgga gctttcagtt
      661 acgcaaagcc gcgacctacc atcgtgacta tacgcctgtg actggggttt gtcgcttttc
      721 cgagtgaggc ccgagtgagg ccccgtaccg ctcctgccgt ggaagggaac gtaacgctct
      781 catctaaacc acgtctattt tgagaagcgc agtttctcct cgtcggggtc gaggtggtcc
      841 ttgacccaga ggcggtcggc gatgacgaaa gggtctcggt tcaggcgtgc ctcgaactcc
      901 gtcactcgcc gggtgaggtc gtctgcgctg gcatgacagt gatgatacgt gacatcctcg
      961 cgcagccagc gccagagcgc ttccacgggc atcagatcag ggctgtaacc cggtagcggc
     1021 atcagcgtga tgtccaaggt cctcgcggcc tcccggacgg cttgggcccg gtgatacggc
     1081 gcgccatccc agagcacgat cagcttgcga tcaggagcct cggtgcgcag gcgttgcaga
     1141 acctcaacgg tgtgctcgcc tttggcgcgc gggaaaggcc acagccgcac ctgtcctcac
     1201 a
//
LOCUS       DASRPQ010002047         1204 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3408619, whole genome shotgun sequence.
ACCESSION   DASRPQ010002047 DASRPQ010000000
VERSION     DASRPQ010002047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1204
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3408619"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(212..667)
                     /locus_tag="VFD73_23220"
     CDS             complement(212..667)
                     /locus_tag="VFD73_23220"
                     /inference="COORDINATES: protein motif:HMM:NF014638.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator"
                     /protein_id="HZI76888.1"
                     /translation="MLVLRRKAGEAIVLNGVITIHVLAVEGERVKLGISAPPEVVIVR
                     SELLEGPGAGMGMPGGAAQGGPMAPHREPRPYREPERPYREPDLNRENNRGLDESGEE
                     SRRGVGMPQEPHRYGYGERPRPFGYGERPRPFGERNLPTSIGSGPLHRE"
BASE COUNT          201 a          453 c          335 g          215 t
ORIGIN      
        1 gatgggtgta cgacaaccca ctcgcgcggc gcggagaccg ctgagactcc cgtgagagcc
       61 atcacgtctg ggagcctcag gcgtcgagga gggataaggc aatctgtggg cgacgccagt
      121 gcgcccaaca ccgggttccc cctcgcctcc acagaaaaga ggtggctggg gtgagcatcc
      181 taccagcgcc gggccggaac tagaatccca actactcccg atgcagcgga ccgctcccga
      241 tggatgtggg caggttccgc tcaccgaacg gccgcggtcg ctcaccgtag ccgaacggcc
      301 tgggccgctc gccatagccg tagcgatgag gctcctgggg catgcccacc ccacgacgcg
      361 actcctcgcc gctctcgtcc agcccacggt tgttctcgcg gttcaggtct ggctcgcgat
      421 acggccgctc cggctcgcga tatggtcgcg gctcgcgatg cggcgccatc ggcccaccct
      481 gagcggctcc ccccggcata cccattcccg cgccagggcc ttcgagcagc tccgagcgca
      541 caatgacgac ttcgggcggc gcgctgatgc caagcttgac ccgctcaccc tccacggcca
      601 acacatgaat ggtgatcacg ccattcaaca cgatggcctc accggctttc cttcgtagca
      661 cgagcattgt acctaccccc tcctcacagg ctgtgtcggc ccgctgcccc acccacctgg
      721 atgacactcc ctgcgaaacc accccatccg atagggtgac gtccaggccc attcgctatc
      781 gcacgatggc aaccggcatc cccgctgagg aagggtatgg cggaccccgc ccaccatgct
      841 cgccctcgtg ccgtcgccgt ccacatgtgt cgcattcaca cttattctat cactgcgctc
      901 ccgctatccc gccttgcgcg gcgacctctg tttctcgcgc cgtccacgga agagccggtt
      961 gccttcacct cgaactctgc ccgtcatgac cagacagccg gaatgcgggc gctatacagg
     1021 ttataacgag tgcgccgttc acgagtaccg tcgttttccg catcatggca ttttggcgag
     1081 ccttcccgcc tgccgctcgc ttcacgggcc tgcttctgcc cggcgtcctc caggcaaagt
     1141 ccaggtcacc ggcgatgcgc cctcaacgtt gcgcgtctcg cgctggcgtc actacgccca
     1201 ctac
//
LOCUS       DASRPQ010002048         1568 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3710644, whole genome shotgun sequence.
ACCESSION   DASRPQ010002048 DASRPQ010000000
VERSION     DASRPQ010002048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3710644"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1235
                     /locus_tag="VFD73_23225"
     CDS             <1..1235
                     /locus_tag="VFD73_23225"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI76889.1"
                     /translation="AGFLVAVPVLAASIVRVTLGNLFQSVDGRKLALASISLSSLPSF
                     VLLLPITPTYTLLLILGVFLGIGGASFAVALPMAGSSYPPRVQGLVLGLAAAGNIGAV
                     LDGFLFPGLADRFGWQHATQAVLPLLALAAVTVFYWAEDRSSKTTDAVRAFIGSIIAL
                     AGLIALVLMVEAGLFGPGKTGQLLLPVLGASVALAVLPRKYLAVLSERDTWVMMLVYS
                     ITFGGFVGMSSYVSLLLTTQYGLSKLNAGFLMAALSFTGAMVRPFGGWIADRLSGVNV
                     LLVLLLAIAISNFSFAMLMPALAGGTTLLGVLYLCFGLGNGATFQLVPHRWRGKTGVM
                     TGIIGAAGGIGGFYLPVVMGIAKESTGSYQMGFATFGTLALLAFVFIAALHQQWLTWS
                     LPQEQATLEFDTSVAHAE"
     gene            1282..>1568
                     /locus_tag="VFD73_23230"
     CDS             1282..>1568
                     /locus_tag="VFD73_23230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76890.1"
                     /translation="MDNQPLAGRVVAIPETREVDIFAAMLERRGARVLRCPMVAIRDA
                     PDPAPILQWSRELASGSFDDLILLTGEGLHRILACIDRNEPALRERFVAALA"
BASE COUNT          248 a          511 c          475 g          334 t
ORIGIN      
        1 aggcgggctt cctggtagcc gttccggtgt tggccgcgtc gatcgtacgc gtgacgctcg
       61 gcaatctttt tcaatcggtc gacggacgga agttggctct ggcgagcatt tctctatcgt
      121 cactaccctc ctttgtgctc ctgctaccga tcacccccac ctacactttg ctgctcatcc
      181 tgggcgtctt cctgggaatt ggcggagcga gcttcgcggt agctctgccc atggcaggca
      241 gcagctaccc accgcgcgtc caaggcctcg tgttagggtt ggccgccgcc ggcaacatcg
      301 gcgcggtgtt ggatggcttc ctgtttccgg gcctggccga cagattcgga tggcagcacg
      361 ccacccaggc agtactaccg ctactggcac tggcggcagt caccgtcttc tactgggcag
      421 aggaccgcag ctccaaaacc accgacgccg tccgcgcctt catcggctcc atcattgccc
      481 tggccggttt gattgccctg gtcctgatgg tagaagccgg actatttggc cccggaaaga
      541 caggccaact cctcctcccg gtcctcggcg cctcggtagc gctggcagtc ctgccgcgaa
      601 agtacctggc ggtactctcc gaacgagaca cctgggtaat gatgctggtg tacagcatca
      661 ccttcggcgg cttcgtcggc atgtcgtctt atgtcagctt gctcctgacg acgcagtacg
      721 gactttcgaa gttgaacgcc ggcttcctca tggcagccct gtcgttcacc ggcgcaatgg
      781 tccgcccctt tggcggttgg atcgccgacc gcctctctgg cgtaaatgta ctgctcgtcc
      841 tgctactagc catcgccatc agcaacttca gctttgccat gctcatgccg gcactcgccg
      901 gcgggacgac gttgctcggc gtcttgtacc tgtgcttcgg cctgggaaac ggggcgactt
      961 tccagctcgt gccccaccgg tggcgaggga aaaccggtgt catgaccggc atcatcggcg
     1021 ccgcaggcgg tattgggggg ttttaccttc cggtcgtcat gggaatcgcg aaggaaagca
     1081 ccgggagcta ccagatgggt ttcgcaacct tcggcaccct cgcgctgctg gccttcgttt
     1141 tcatagcagc actccaccag caatggctga cgtggtcact cccccaagag caagccaccc
     1201 tggaattcga tacatcggtg gcgcacgcag agtgagcgcc cttgtccata agcggcggcg
     1261 tacgagtaag atgccgctct tatggacaac caacccctgg ctggtcgggt cgtcgcgatc
     1321 cccgagacgc gggaggtcga catcttcgcc gcgatgctgg agcgccgcgg cgcccgggtg
     1381 ctacgctgcc ccatggtggc gatccgagat gcaccggacc cggcgcccat ccttcagtgg
     1441 agtcgcgagc ttgcttcggg gtcgtttgac gacctgattc tgctgacggg ggaggggctg
     1501 caccgcatcc tcgcctgcat cgaccgcaat gagccggcat tgcgtgagcg gttcgttgcc
     1561 gcgttggc
//
LOCUS       DASRPQ010002049         1774 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2782332, whole genome shotgun sequence.
ACCESSION   DASRPQ010002049 DASRPQ010000000
VERSION     DASRPQ010002049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2782332"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..405
                     /locus_tag="VFD73_23235"
     CDS             <1..405
                     /locus_tag="VFD73_23235"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HZI76891.1"
                     /translation="VTEWIISLARWPILLGAIVLVLAVLYRYGPSRDTAQWRWISAGS
                     LVAAVVWVAASMLFSWYVANFGNYNETYGSLGAVIGFMTWMWLSTTVVLVGAELNAEI
                     EHQTVQDTTEGPEKPLGARGARMADTVGAAKA"
     gene            complement(622..1689)
                     /locus_tag="VFD73_23240"
     CDS             complement(622..1689)
                     /locus_tag="VFD73_23240"
                     /inference="COORDINATES: protein motif:HMM:TIGR00765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HZI76892.1"
                     /translation="MADEEAPGQDWRSVETRAADHHALGTARKRAAEPGRGRDATRPE
                     EIPSRGWVDILWRVIGSIPQDRVSATAGGVAFFALLAVFPGLATVVSLYGLFADVTTM
                     SRHLTLLTGILPSGVLDLLAQEMGRIAGKSTPTLSTAFLVSFAIAFWSANSGSIALFD
                     ALNVIYKEREKRSLVRLYGTTFLFTLGAIGFGVAATTAVVVIPVLLNLVGLTSFSDRL
                     LSIARWPILLILVVLGLALIYRYGPSRHEAKRRWVIWGSALATLLWMLGSMAFSWYVA
                     SFDSYNRTYGSLGAGVGFMTWMWLSIVIVLLGAELNSEMERQTARDTTECQPKPIGSR
                     EAYAADTVGKAIGQGQRRVTS"
BASE COUNT          347 a          554 c          564 g          309 t
ORIGIN      
        1 gtcacggagt ggatcatctc cctcgcccgc tggccaattc tgttaggcgc gatcgtgctc
       61 gttctggctg tcctgtaccg ttacgggccc agccgagaca cggcccaatg gcgttggatc
      121 agcgcaggta gccttgtggc cgcggtggtc tgggtggctg cttccatgct gttctcctgg
      181 tacgtggcga acttcggcaa ctacaacgag acttacggat ccctgggtgc cgtgattggc
      241 tttatgacct ggatgtggct ctcaactacc gtggtcctgg ttggagctga gttgaacgcc
      301 gagattgagc atcagacggt tcaggacacc accgaaggtc ccgagaagcc gcttggagcg
      361 cggggcgctc gcatggccga cacagtgggt gcggcaaagg cctaagagca caccctcctg
      421 gtctcgaggg gtcctacagt ggttgaggaa gcaggtgttc caaggcggct gcgcggaggc
      481 gaccggctgt gaaatttaac agattgatga cggggagctt gcccttccat tctgctcctt
      541 gtactccgaa acaatctcca gaggtcagaa ggcgaaaggc acgtcgagaa gcgactcggg
      601 gccgaaaggt gaaccgttaa atcaagaggt cacccggcgc tgtccttggc cgatggcttt
      661 gccgaccgta tcggccgcgt aagcctcgcg cgacccgatc ggcttgggtt ggcactccgt
      721 cgtgtcccgc gcggtctgcc gctccatctc ggagttcagc tccgccccaa gcagcacgat
      781 aacgatggac agccacatcc aggtcatgaa ccccacaccc gcgcccaatg agccatacgt
      841 ccgattgtag ctgtcaaagc tcgccacata ccaggagaac gccatcgacc cgagcatcca
      901 cagcagcgtg gccaaggcgc tgccccatat gacccaacgc ctcttcgcct cgtgccggct
      961 cgggccgtag cggtagatca gcgccagccc cagcacgacc aagatgagca ggatgggcca
     1021 gcgggcgatg ctcagaagcc ggtccgaaaa ggaggtcagg ccgacaaggt tcaggagcac
     1081 agggatgaca accacggccg tggtggcggc aaccccgaac ccgatggcgc ccagggtgaa
     1141 cagaaaggtt gtgccgtaaa ggcgaacgag cgatcgcttc tcccgctcct tgtagatgac
     1201 gttaagcgca tcgaagagcg cgatgctgcc ggagttcgcg ctccagaacg ctattgcgaa
     1261 actcaccaga aaggctgtgc tcagcgttgg cgtgctctta cctgcgatgc gccccatctc
     1321 ctgcgccagc aggtccagaa ccccgcttgg caagatgccg gtgagcaggg tgaggtggcg
     1381 gctcatcgtg gtcacgtccg cgaacaggcc atagagcgac accacggtcg caagaccggg
     1441 gaagaccgcc agcagcgcaa agaaggcaac ccctcccgct gtggcggaca cacgatcctg
     1501 cgggatggac ccgatcacgc gccagaggat gtccacccac cccctgctcg ggatctcctc
     1561 cggacgtgtg gcgtcccgac ctcgcccggg ctcggcggcg cgcttgcggg cggttccaag
     1621 cgcatggtgg tcagccgcgc gtgtctcgac cgaccgccag tcctgcccgg gcgcttcctc
     1681 gtcagccata acagccagtt gacgaagtcg gcgcggtctg actcgattta gcggagagag
     1741 cgggtcggag tctggctatg gcgatgggtc ggca
//
LOCUS       DASRPQ010002050         2026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3055394, whole genome shotgun sequence.
ACCESSION   DASRPQ010002050 DASRPQ010000000
VERSION     DASRPQ010002050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2026
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3055394"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(286..435)
                     /locus_tag="VFD73_23245"
     CDS             complement(286..435)
                     /locus_tag="VFD73_23245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76893.1"
                     /translation="MTPHENWGPEPDPEEQERQRQRVLTARLLFVIAVLVGVITPMLL
                     KRFVF"
     gene            540..1723
                     /locus_tag="VFD73_23250"
     CDS             join(540..804,804..1723)
                     /locus_tag="VFD73_23250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611382.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZI76894.1"
                     /translation="MPKKRHTPEEIVAKLRQVDVLVAQGTPVADAIRAIGVTEVTYYR
                     WRQEYGGLKSDQIKRMKALETENARLRKAIADLTLDKLILQEAAPGKLLSPARRRACV
                     EHIRSVLTISERRTCRALGQHRSTQRKAPRGQEDEERLTADLIELARQYGRYGYRKIA
                     ALLRDAGWRVNDKRVERIWRREGLKVPQKQPKRSRLWRADGSCIRLRPEYPNHVWSYD
                     FVEDRTHDGRKFRMLNVVDEFTHECLAIRVDRKLKAIDVIDVLADLFILRGVPGHIRS
                     DNGPEFVAKAVQRWITAVGAKTAYIAPGSPWENGYVESFNARLRDELLNGEIFYSLRE
                     AKIVIESWRRHYNTKRPHASLGYRPPAPEVFVPAFAAWPATPSRPAPPARLPVAPKPT
                     MH"
     gene            complement(1727..>2026)
                     /locus_tag="VFD73_23255"
     CDS             complement(1727..>2026)
                     /locus_tag="VFD73_23255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76895.1"
                     /translation="VQDRGLSAVSMERRRKWAASGALPPALASRFTLAEQSVLAVIAA
                     EHQKHGACTLTINHIAALAGVCGQTVRNALKAAHELVNVEQRRVNGDRPPWGGPV"
BASE COUNT          383 a          655 c          642 g          346 t
ORIGIN      
        1 tgaagggcca gacgctgccg ctcggctgca gggcaacggc gatctctgct cctttgtgcc
       61 agctctgggt ccgtggcagg tggtcatagg cgatgcacca gtgcgtcccg tcgctcagtt
      121 cagccacacc ctcttcatcg atgcacacga gccgtgacat gctcaggccc tcccgagaga
      181 gcccccacgc atctgtctgc taactccgat gcaccaagtt cagttcgtgg gcggaaagag
      241 aaccccaccc tggcttctgg ccaggttggg gccgggggat tgggcctaga agacaaaccg
      301 cttcagaagc attggcgtaa tcacgccaac aagcacggcg atcacgaaca agagccgcgc
      361 ggtcagcaca cgttgacgct ggcgctcctg ctcctctgga tcgggttccg ggccccagtt
      421 ttcatgcggt gtcatcggcg agccgctttg atccttaacg caggacctga gatgcctgat
      481 ccgcccccag tggagtggtc catcctgaag tatggcttgc gagccgaagg aggatcacga
      541 tgccaaagaa gcgacacacc cccgaagaga tcgttgccaa gctgcgccag gtcgatgtgc
      601 tggtcgcaca aggaacccca gtggcggacg cgatccgcgc gattggggtc accgaggtca
      661 cgtactatcg ctggcgccag gagtacggcg gcctgaagtc ggaccagatc aagcgcatga
      721 aggcgctgga gaccgagaat gcgcgcctgc gcaaggccat cgcggatctc acgctcgaca
      781 agctgatcct gcaggaggcc gcccggggaa acttctgagc cccgcgcgcc ggcgcgcctg
      841 tgtcgagcac atccggtccg tgctgaccat ctccgagcgt cgcacctgcc gggcgctcgg
      901 tcagcaccgc tcgacccagc gcaaagcgcc gcggggccaa gaagacgaag agcgactcac
      961 cgccgatctc atcgagctgg cgcgccagta tggccgctac ggctatcgca agatcgcggc
     1021 acttctgcgc gatgcgggct ggcgggtgaa cgacaagcgg gtggagcgga tctggcgccg
     1081 cgaggggctc aaagtgcctc agaagcagcc taagcgctca cggctgtggc gcgcagacgg
     1141 gtcctgcatc cgactgcggc cggagtaccc caatcacgtg tggtcgtatg actttgtcga
     1201 ggaccgcacc catgatggac gcaagttccg gatgctcaat gtggtcgatg aattcacgca
     1261 cgagtgtctg gccattcggg tggatcgcaa gctcaaggcc atcgacgtca tcgacgtgct
     1321 cgcggacttg tttatcctgc gcggtgtgcc gggtcacatc cgctccgaca acggaccgga
     1381 gttcgtggcc aaagccgtgc agaggtggat tacggcggtg ggggccaaga cggcgtacat
     1441 tgccccaggc tcaccgtggg agaacgggta tgtggagtcg ttcaacgccc ggctgagaga
     1501 tgaactcctg aacggcgaga tcttctactc actgcgggag gccaagatcg tgatcgagag
     1561 ctggcgacgc cattacaata ccaagcgccc gcatgcctcg ctgggctacc ggcccccggc
     1621 tccggaggtg ttcgtgcctg ccttcgcggc ctggccggct acgccatccc gaccggctcc
     1681 gccggccaga ctccccgtag cgcccaaacc aaccatgcac taacattcaa accggaccac
     1741 cccatggggg ccgatcaccg ttcacgcgcc gttgctcgac gttcaccaac tcatgggcgg
     1801 ccttcagggc gttgcgcacc gtctggccac agacgccagc gagcgccgct atgtgattga
     1861 tcgtgagcgt acatgctccg tgcttctggt gctcagccgc gatcacggct aggacgcttt
     1921 gctcggccag cgtaaaccgg ctggctaggg ccggcggcag agcgccggac gccgcccatt
     1981 ttcggcggcg ttccatgctg acagctgata ggccgcgatc ctgaac
//
LOCUS       DASRPQ010002051         1558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_865093, whole genome shotgun sequence.
ACCESSION   DASRPQ010002051 DASRPQ010000000
VERSION     DASRPQ010002051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_865093"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..863)
                     /locus_tag="VFD73_23260"
     CDS             complement(<1..863)
                     /locus_tag="VFD73_23260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76896.1"
                     /translation="MSLRPKLRQDLVLVEQSYRGEQSFIVKDPESRKYFRFRPVEIKV
                     MLTLDGTRTAAEAAAELLQLGIKVSAAGVEGFAAKLAKMGLCERTLSERSVLQMERLR
                     AERRKKLRPSLFQGELLRMRWSVGDPDEFFNRWLPRLGFFFSRSFLILSVALFAIYIL
                     ILAIKWPEFTRALADFYTLNVGLGTLVVFWVTGTVIIVIHELGHGFTCKYFGGQVHEI
                     GAMLIYFEPAFFCNVNDAWTFPELKSRLWVTAAGSWIQLVIASLGAIVWWAATPGTLP
                     SEVAFAAVLIGG"
     gene            complement(860..>1558)
                     /locus_tag="VFD73_23265"
     CDS             complement(860..>1558)
                     /locus_tag="VFD73_23265"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HZI76897.1"
                     /translation="STDQRIALDQAQEKFNNARQMVQRQRTLKAGGFITQADSEQVEL
                     EFRQAELGLKKAQRDYDLTVIVAPFAGVVTGRTARVQRLVNPGDSLFRVTALRPVLAA
                     VHVPETSAAKIDVGTQATVVALDGREAPARVIRAAPVLDPASGTREIILQLTGNQPQL
                     VPGSNVTVRLGSERRQVVAIPRTAVAPDGYALVWANDKTTLRALTLGSAIDDERVEVV
                     SGLSPGEKIVRNGP"
BASE COUNT          300 a          491 c          489 g          278 t
ORIGIN      
        1 cctccgatga gcaccgcggc aaaggcgacc tcggatggca aggtgccggg cgtggccgcc
       61 caccagacga ttgcgccgag actggcgatg acgagctgaa tccaggaccc tgccgccgtc
      121 acccagagac gcgacttcag ctcggggaag gtccaggcat cgttgacgtt gcagaagaag
      181 gcgggctcga agtagatcag catcgccccg atctcatgga cttgcccgcc gaaatacttg
      241 caagtgaagc cgtgccccag ttcgtggatg acgatgatga cggtgccggt gacccagaag
      301 accaccagcg tgcccaggcc gacgttgagc gtatagaagt cggccagggc ccgggtgaat
      361 tcgggccact tgattgccag gatcaggatg tagatggcga acagtgcaac cgacaagatg
      421 agaaacgacc ggctgaagaa gaatccaagc cggggaagcc atcgattgaa gaactcatcc
      481 ggatctccca ccgaccagcg catccgaagg agctcgccct gaaacagact gggccgaagc
      541 ttcttccggc gctctgcccg aagccgctcc atctgcagca ccgaccgctc gctcagggtc
      601 cgttcgcaca aacccatctt ggcgagcttg gcggcaaatc cttcaacacc cgcggcagaa
      661 accttgatcc ccagttgcag cagctccgct gccgcttcgg cggccgtgcg agtgccatcg
      721 agcgtcagca tgaccttgat ttcgaccggc cggaatcgaa agtatttccg cgactccggg
      781 tctttgacga tgaagctttg ttcgccccgg tagctctgct ccaccaggac cagatcctga
      841 cggagcttgg gacggaggct cacgggccgt tccgaacgat cttctcgccg ggagacaggc
      901 cgctgacgac ctccactctt tcatcatcaa tcgcactgcc gagggtcagg gcgcgaagcg
      961 tcgtcttgtc gttggcccag acgagggcgt agccatccgg agccactgcg gttcgaggaa
     1021 tggctaccac ctgacgccgc tctgagccga gtcgcacggt gacgttgctg ccagggacta
     1081 gctggggttg gttgccggta agctgcagaa tgatttcccg ggtgccgctc gcagggtcga
     1141 ggaccggggc ggctcggata acccgggctg gcgcctctcg gccgtcgagc gccaccaccg
     1201 tggcttgagt cccgacatcg atctttgcgg cagaggtctc cggcacgtgc accgcagcga
     1261 ggaccggccg gagcgcggtc acccggaaga gggagtcccc tggattgacc aggcgctgga
     1321 cccgggctgt acgtccggtc accactccgg cgaagggtgc aacgatgacg gtcaggtcgt
     1381 aatcacgttg ggccttcttc agccccagct cggcttggcg aaactccagc tctacctgtt
     1441 cggagtccgc ctgggtgatg aaccctcctg ccttcaaggt gcgctggcgc tgcaccatct
     1501 ggcgggcatt gttgaacttt tcctgggcct gatcgagcgc gattctctga tcggtact
//
LOCUS       DASRPQ010002052         1294 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2425522, whole genome shotgun sequence.
ACCESSION   DASRPQ010002052 DASRPQ010000000
VERSION     DASRPQ010002052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1294
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2425522"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..803
                     /locus_tag="VFD73_23270"
     CDS             <1..803
                     /locus_tag="VFD73_23270"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HZI76898.1"
                     /translation="RLVSLAGGRGTAPYDEEFFAYHDDAALASARTIVPLLLRLIQPS
                     SVVDVGCGRGAWLRVFQEHGVPAVRGLDGDHVDRSKLLIDPDRFTAVDLAAGLRLEGR
                     YDLALCLEVAEHLSPKAGRLLVQGLTAAAPLVLFSAAIPGQGGTSHINEQWPWYWDEL
                     FSQHGFQRLDPIRRHIRQNQQVKWWYRQNLVLYVDRPQLSGSPALQEEAVLSSTAPFE
                     WVHLQVVTRRASFRALLRELPRSALRSVKGHVRQALRMNGEHDGPQPR"
     gene            784..>1294
                     /locus_tag="VFD73_23275"
     CDS             784..>1294
                     /locus_tag="VFD73_23275"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HZI76899.1"
                     /translation="MDRNRGDSIEPPSITACVVCHNEADRLGDCLASVAWTDEILVMD
                     LASTDESPEIAARHGARVLHRPRVSIVELVRNELAASARGDWILVLDPDERITDGLAH
                     ELRRAAARPDLDAVVIPRMNYDLGYPPSHPLHRYEPQLRMYRRSAVSWPTIPNALPQV
                     PAERLLRLPG"
BASE COUNT          208 a          423 c          405 g          258 t
ORIGIN      
        1 gccggctcgt gagcctcgct gggggtcgag gaacagcacc atacgacgag gagttcttcg
       61 catatcacga tgatgcagcc ctggcctcgg cgcggaccat tgtcccactc ctgttgcgcc
      121 tcatccagcc ctccagcgtc gtcgacgtcg gatgtggccg cggggcctgg ttgcgtgtct
      181 ttcaagagca cggggtgccc gctgttcgcg ggctcgatgg cgatcacgtt gaccgttcga
      241 aacttctgat cgatcctgat cgcttcaccg ccgtcgatct cgcagcgggc ttacgattgg
      301 agggacgcta cgacctggcc ctctgtctcg aggttgcgga acatctctcc cccaaggctg
      361 gccggctgct ggtgcagggg ctcacagccg ccgcccctct cgtgctcttc tccgcagcca
      421 tacccggtca gggtggcacc tcccacatca acgagcagtg gccatggtat tgggacgaac
      481 tcttttcgca acacgggttt cagcggctgg atccgatccg ccggcacatc cggcagaatc
      541 agcaggtcaa gtggtggtac cgccagaacc tcgtgcttta tgtcgaccga ccgcaattga
      601 gcggcagccc ggctctccag gaagaggccg tcctgtcgtc cacggcaccg ttcgaatggg
      661 ttcacctgca ggtcgtgact cggcgggcga gcttccgcgc cctgttgcga gaactgccga
      721 gatccgcact gagatctgtc aagggccacg tccgccaggc gttgcggatg aacggagagc
      781 atgatggacc gcaaccgagg tgacagcata gagccgccct ccattaccgc ctgtgtagtg
      841 tgccacaatg aggcggatcg tttgggcgac tgtctggcgt ccgtggcttg gaccgacgag
      901 atcctggtca tggatctcgc cagtaccgac gagtcgccgg agatcgctgc ccgccatggt
      961 gcacgagtgc tccatcggcc tcgggtcagc atcgtggagc tggtacggaa cgagctggcc
     1021 gcctcggccc gtggtgactg gatcctcgtt ttggaccccg atgagcggat taccgacggt
     1081 ctggctcatg agcttcggcg tgccgctgcc cggcccgatc tggatgccgt ggtcatcccg
     1141 cggatgaact acgatcttgg ttatccgccg agtcatccgc tccatcggta cgagcctcaa
     1201 cttcgcatgt accggcgatc cgcggtaagc tggcctacca ttcccaacgc gctgccgcag
     1261 gtgccggccg agcgcctgct ccggctcccg ggtc
//
LOCUS       DASRPQ010002053         1548 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3711006, whole genome shotgun sequence.
ACCESSION   DASRPQ010002053 DASRPQ010000000
VERSION     DASRPQ010002053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3711006"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..484
                     /locus_tag="VFD73_23280"
     CDS             <1..484
                     /locus_tag="VFD73_23280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76900.1"
                     /translation="PTRAAILDTLAASQTRVLAFFHGLSPHDLERPATASDLPGAAPW
                     RAKDHLAHLAQSERNIQRVLRRLLAGYTRDELLLLQYPAGMPLPGTLGDWDALTPEEQ
                     ERLELAVANVNQTYVNAHRDDTLETLVADFLAARQELVDLLHQFTDEQLAAPVPPAHM
                     "
     gene            716..1450
                     /locus_tag="VFD73_23285"
     CDS             716..1450
                     /locus_tag="VFD73_23285"
                     /inference="COORDINATES: protein motif:HMM:NF015534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Type 1 glutamine amidotransferase-like
                     domain-containing protein"
                     /protein_id="HZI76901.1"
                     /translation="MRLLLTSAGVKNASIHNALVELLGKPIAEASALIIPTAIYPFPG
                     GAGMAWRAICGAAGGPLSGLGWKSLGVLELTALPSIADDAWIPTVQQTDALLVWGGDP
                     LYLCHWMRQSGLADLLPSLRPEMVYVGVSAGSMAATATFGETYPDPPRGSGEALTSQD
                     IVFATPQGAISRILVTAQGVGLVDFAVIPHLDHEDHPDASLANAAKWAARLPVPTYAI
                     DDQTAIKVTGDTVAVVSEGHWKLFTP"
BASE COUNT          265 a          503 c          511 g          269 t
ORIGIN      
        1 gccaacgcgc gcagcgattc tcgacaccct ggcggcgtcg cagacgcggg ttctggcctt
       61 ttttcacggg ctcagcccgc atgacctgga gcgcccggca accgcgagtg acctgcccgg
      121 agccgctcca tggcgcgcca aggatcattt ggcgcacctg gcgcaaagcg agcgtaacat
      181 ccagcgcgtg ctgcgccgtc tcctcgccgg ctacacgcgc gatgagctct tactcctgca
      241 atacccggcg ggcatgccgc tgccgggcac tctgggcgat tgggacgcgc taaccccgga
      301 ggagcaggag cggctggagc tggccgtcgc caacgtcaac caaacctacg tgaacgcgca
      361 ccgtgacgac acgctggaga cactggtagc tgatttcctg gcggcgcggc aggaactcgt
      421 ggacctgctg caccagttca ccgatgagca gctggccgct ccggtgcccc ccgcgcacat
      481 gtgagcgggc cgtcggcgac gtgtttgccg ggaaagcggg gcatgtgacc gagcacctga
      541 gctcaattga ggaaggatgg cgtcagggcg ttcagggtgt tcagggcgtt cagggcgtgt
      601 agatgggtgt ctttccgcgc cggtcagcgc cgtcgtgacc cgatggacag aaggccactg
      661 ctatcgtgag accgttggtt catggctcgt atgcaatcca caagggagag gcatcatgcg
      721 gttactgctc acctccgctg gcgttaagaa cgcgagcatc cacaacgcgc tggtcgagct
      781 gctgggcaag ccaattgccg aggccagcgc cctcatcatt cccaccgcga tctacccctt
      841 ccctggcggt gccggcatgg catggcgggc gatctgcgga gcagccggcg gccccttgag
      901 cggattgggg tggaagtcgt tgggcgtgct ggagctgacc gcgctgccca gcatcgctga
      961 cgatgcgtgg atccccacgg tccagcagac ggacgccttg ctggtttggg gcggcgatcc
     1021 cctgtatctg tgccactgga tgcgccagtc gggactggcg gacctgttgc cgtcgctgcg
     1081 gccggagatg gtctacgtgg gggtgagcgc cggcagcatg gcggcgaccg ccaccttcgg
     1141 cgagacctac cctgatccac ccaggggcag cggcgaggcg ctcacgtcgc aagacatcgt
     1201 gttcgccaca ccgcagggag caatcagccg gatcctggtc acggctcagg gagtgggact
     1261 ggttgacttt gcggtgattc cgcacctgga tcacgaggat cacccggacg catccctggc
     1321 caacgcagca aagtgggctg cgaggctacc cgtgccaacc tacgcaatcg acgatcagac
     1381 cgccatcaaa gtgaccggcg acaccgtcgc agtcgtttcc gaggggcact ggaagctgtt
     1441 tacgccctaa gacgctgccg ctctccgccc ccggtgggcc agcagcaacc gcatcatcgc
     1501 cacctcgatg agcatctcgc tcgtctggat cttgcgctcg tagtcttt
//
LOCUS       DASRPQ010002054         1540 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1173425, whole genome shotgun sequence.
ACCESSION   DASRPQ010002054 DASRPQ010000000
VERSION     DASRPQ010002054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1173425"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1540
                     /locus_tag="VFD73_23290"
     CDS             <1..>1540
                     /locus_tag="VFD73_23290"
                     /inference="COORDINATES: protein motif:HMM:NF025179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNVR domain-containing protein"
                     /protein_id="HZI76902.1"
                     /translation="DLEVVGSRTLIEEATRLLGLQVRLIYPRDVSRDRVFSDIQVAPD
                     AKKMEYALVRQDDSSFAVEDQAGTQLGRVRPGGRVVLQGTSLRLTPAASQYSELRVMI
                     RSFADAVARTDVTVSRAGKEADIIRVSYEDTDRGLVWRVPNAIAESFIQRRQDAQKVA
                     TRSQAKFLREQLDTLSIQLAAAESDLKTFRERARVVDPTVEASSQINRLVNLQADRSS
                     LEAERSALASLLKDVQERHKRQAPGQPSVYRDLLAFPSLLRSQAASQLLGSLAQVEDQ
                     RSTLLTRRTDADPDVQLLTNRIHELENQLSSIATSYLQGLTSQLASLDATIAQFGGEL
                     GKMPRKELEYARLERKPEVLKEMYSLLQTRLKEAEIAEAAVNNSVSIVDPAIPPRKPI
                     RPKPGLLTMMGVFGGLLAGLGLAMAREYADRSIKTRSQATAASGLPVMAIIPRIARQS
                     HRSAIIAKRSTAVIPKATGNSHRPTPPPAQVGGYTFFSGAPSPETPADSPAGSPAAAP
                     VIAKH"
BASE COUNT          310 a          485 c          467 g          278 t
ORIGIN      
        1 gaccttgaag tcgtcggaag ccgtactctg atcgaggagg ccacgcgact tctcggactg
       61 caggttcgtc ttatttatcc tcgggacgtc tccagagacc gcgtgttctc tgatatccag
      121 gtcgcacccg atgccaagaa gatggaatac gccttagtac ggcaggatga cagcagcttt
      181 gccgtcgagg accaggccgg cactcagctg ggcagggtcc gtcccggtgg acgcgtcgtg
      241 ctgcagggca ccagcctccg actcactccc gctgcaagcc agtattctga gttgcgggta
      301 atgattcgct ccttcgcgga cgcggtggcg agaacggatg tcaccgtgtc acgtgccggc
      361 aaggaggcag acatcatcag ggtgagctac gaggacaccg atcgcgggtt ggtatggcgg
      421 gtccccaacg ccatcgcaga gagcttcatt cagcgccgac aagacgcgca gaaagtcgcg
      481 actcgcagtc aggccaaatt ccttagggag cagctcgata ccctttcgat ccaacttgcc
      541 gccgccgaat ccgacctcaa gaccttccgt gagcgtgccc gggtcgtgga tccgacggtt
      601 gaggccagca gtcagatcaa ccgcctggtg aatctgcagg cagaccgcag ttctctggag
      661 gccgaacgct cggctctggc cagcctgctg aaggatgtcc aggagaggca caagcggcag
      721 gcgcccggac aaccctctgt ctatcgcgac ctgctggcgt ttccgagcct cctccggagt
      781 caggcggctt cccagctgct tggctcgttg gctcaggtcg aggatcagcg atccaccttg
      841 ctgacccgaa ggaccgacgc cgatccggac gtacagctgc tgacgaacag gattcacgaa
      901 ctggagaacc agctcagcag cattgccaca tcctatctgc aaggcctcac cagccagctt
      961 gcctcactcg acgcgaccat cgcccagttt gggggtgagc tcggaaagat gccgcgcaag
     1021 gagctggagt acgcccgatt ggagcgcaag cccgaagtgc tgaaggagat gtactctctg
     1081 ctccaaaccc ggttgaagga ggcagagatc gcggaagcgg ctgtgaataa cagcgtcagc
     1141 atcgtcgatc cggcaattcc acctcgtaaa cccattcggc ccaagcccgg tctcctcacc
     1201 atgatgggtg tttttggcgg gcttctggca ggtctcggtc tcgccatggc tcgggagtac
     1261 gccgatcgat ccatcaagac ccgatcgcag gcaacggcgg ccagtgggtt accggtgatg
     1321 gcgatcattc cccggatcgc tcgtcagagt catcggtcgg cgatcattgc caagcgcagc
     1381 acggccgtaa tcccgaaagc gactggcaat agccaccgac cgacgccgcc cccagctcaa
     1441 gtgggggggt atacgttctt ttcgggcgcc ccatctcctg agactcctgc ggacagtcca
     1501 gcgggaagcc cagccgcggc gccggtgatc gccaagcacc
//
LOCUS       DASRPQ010002055         2632 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1512682, whole genome shotgun sequence.
ACCESSION   DASRPQ010002055 DASRPQ010000000
VERSION     DASRPQ010002055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2632
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1512682"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1099)
                     /locus_tag="VFD73_23295"
     CDS             complement(<1..1099)
                     /locus_tag="VFD73_23295"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HZI76903.1"
                     /translation="MTEVRVDRLNKHTVAWLVLGLIVVGLLLRFWRLGDWNFQATEIF
                     TLRDSGRPQFNNPRPLGYVLNYYLIRPFLPLDEFGLRLLPAVFGVLAIPVLYLVGRRV
                     IGSRAALFAALLLTLSPLHIMYSQLARYWSLVFFFSAIYPSALYVGVRERNPRWLVLG
                     IVTAILAALAHPVSSLLLAGPLLVLLPTYLRPGLLREIWERRSFRWWTLAAFIVAVLI
                     VIRFIPILYGWIAEHDRNPGSGQFLLRNNPPGIKQLIYLLAFVDSLTVPLTFIALLGL
                     YLLWRSGFRLLAMYLSSVAGFPILFLTLISLRTPVSQYYLLPTVPVFFLAAGFFLDWV
                     ASVEWPVRPRWVVPAAFAAIVIAAGLPTLGSD"
     gene            1543..2475
                     /locus_tag="VFD73_23300"
     CDS             1543..2475
                     /locus_tag="VFD73_23300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76904.1"
                     /translation="MVRTLTFARMGRFRALWLIALATGFSACNAADPFTSASEDTPAT
                     PVDPSTPSEPSFAISYAGGIPMGTWAQPTSTLGYRYNGTLRVIWPKYLKSELSAIRSR
                     GGRVVLSMTGSEWQFKDSNGHFSFTKWKERVNRYRGMDLSSYVRDGTLIGHFLLDEPN
                     DPTNWNGQLVSPATVEAMAKYSKSLWPYLPTLVRAEPHYLLYNHHYLDAAWAQYVTRK
                     GTATDYLRRNVADASARHLALVVGLNIRKGGPGGRAMTGAEIANWGSIMLNSTYPCAF
                     LSWQYSSQLNQSSVQKAMDLLRRKAQSRAAKRCS"
BASE COUNT          605 a          816 c          780 g          431 t
ORIGIN      
        1 agtccgagcc caaggtcggt aacccagccg caataacgat ggcggcaaag gcagcgggga
       61 cgacccagcg cggacgaacc ggccactcca ccgaagcgac ccagtccagg aagaaccctg
      121 cagccagaaa gaagaccgga acggtaggga gcaagtaata ctgcgacacc ggcgtacgga
      181 gcgagataag ggtcaggaac agaatcggga atcccgccac gcttgacagg tacattgcca
      241 gcagtctgaa cccacttcgc cacagcagat aaaggcccag aagcgcgatg aatgtcagcg
      301 gaaccgtgag actgtcaacg aatgccagca ggtagatcag ctgcttgatt cccggagggt
      361 tgtttcgcag cagaaactgc ccgcttccgg ggtttcggtc gtgctctgca atccagccat
      421 aaagaatggg aatgaagcgt atgacgatga gcacggccac gatgaacgcc gctagtgtcc
      481 accaccgaaa gctccttcgc tcccagatct cgcgcagcag accgggacgc agataggtcg
      541 ggagcagcac gagcaacggt ccggcgagca gaagcgatga caccgggtgg gccagtgccg
      601 ccagaatcgc ggtgacaatc ccgaggacga gccaacgagg attgcgctcg cgcactccca
      661 cgtagagcgc ggagggatag atcgccgaga agaagaacac cagcgaccag tagcgcgcca
      721 gctgagagta catgatgtgc agcgggctca acgtcagcag tagcgcggca aacagggcgg
      781 ccctgctgcc gatgacccgt cggcccacga gataaagcac cggaatcgcg agcacgccga
      841 atactgccgg cagcagcctg agcccgaact cgtccagagg gaggaatgga cggatcaggt
      901 aatagttcag gacatatccc agcgggcgcg gattgttgaa ttgcgggcgg cccgagtcgc
      961 gcagcgtgaa gatctcggtt gcctggaaat tccagtcgcc gagacgccag aagcgcagca
     1021 gcagaccgac gacgatgagg ccgaggacga gccaggcgac ggtgtgcttg ttcagtcggt
     1081 cgactcggac ctcggtcatg cgaacctcga caatattcca ttccggacga gcttatacac
     1141 gtccggccca gcggagcgag aacactaatc gcggcctaac tgcaacacca cttcggagtt
     1201 cggcgcaccg gtcaggctcg gcggtgggac aatctgtcaa gaaataaact cttgacaaat
     1261 gtgacgcgtg tcacgatgct gtatgcggcg cgagcagcca cgaaaacgag atgacgccac
     1321 cctggtgttc attccatcgc gccctgtacg actagcctca tagtctcagc ggaacctgta
     1381 gcccaaacac gataataggg aacggcagac atcctgcctg tcccactccg ggtctgacgt
     1441 cagcctcgat gagccgccgc gttggccttg ccatgcgctg gcccctcgcc tgcacaaccc
     1501 gggacacttc aacactctcg tgatggagag gaaactctcg ctatggttcg aaccctcacg
     1561 ttcgcccgga tgggacgctt tcgagcgctc tggctcatcg ctctggccac gggctttagc
     1621 gcatgtaatg ccgctgatcc cttcaccagc gcttcagagg acactcccgc caccccggtc
     1681 gaccccagca cgccttcaga gccgtcgttc gccatcagct atgcgggcgg aatcccgatg
     1741 ggaacctggg ctcagcccac atctaccctg ggatatcgct ataacggcac tcttcgagtg
     1801 atttggccca agtacctgaa gtctgagctg tcggcgatac gctcccgcgg tgggcgggtc
     1861 gtcctttcca tgaccgggag tgagtggcag ttcaaagact ccaacgggca cttcagcttc
     1921 acgaagtgga aagagcgggt gaacaggtac aggggtatgg atctctcgtc ctatgtaagg
     1981 gacggaacac tcattggcca cttcctcctc gacgagccga acgatcccac caactggaac
     2041 ggacagctgg tgtcgccggc gactgttgaa gcgatggcca agtacagcaa gtcgctgtgg
     2101 ccctatctcc cgacgctggt ccgtgccgag ccgcactatc tgctctacaa tcaccattat
     2161 ctggacgccg cctgggctca gtacgtcacc cgcaagggta cggccactga ttatctcagg
     2221 cgcaacgtcg ccgacgccag cgcgcgtcac ctggcacttg tcgtgggtct caacatccgc
     2281 aagggcgggc ccggtggccg cgcgatgact ggcgccgaga ttgcaaactg gggctcgatc
     2341 atgctcaaca gcacgtaccc ctgcgccttc ctcagctggc aatactccag ccaactcaac
     2401 cagtcgagcg tacagaaggc aatggacctc ctacggcgca aggcacagag ccgggccgcc
     2461 aagaggtgta gttgaccttg cactgacgcg cgaacgatgc aacaaaaggg gccgcggaca
     2521 tccgcggccc ctttgctgcc gacttcgtaa cgatcaccag ccgccctgac gtcggaagat
     2581 gactggcagg gtcttgagca taatccggac gtcttccatc accgatcgcc gg
//
LOCUS       DASRPQ010002056         6943 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3055919, whole genome shotgun sequence.
ACCESSION   DASRPQ010002056 DASRPQ010000000
VERSION     DASRPQ010002056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6943
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3055919"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1047
                     /locus_tag="VFD73_23305"
     CDS             <1..1047
                     /locus_tag="VFD73_23305"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI76905.1"
                     /translation="GWAVAALVLGLILLAGGLEAAGYDAAGALGALWSGAFGSWYSIS
                     SGTLPRSVPLILIGLGLALGFRGGALNIGAEGQFYAGAIAATWIGLHVAARPAVIAIP
                     ALLLAAALAGGLWVALPVWLKLRFGVIEVISTLLLNFVAEALVSLMVQGPLQEPTRVY
                     PQSDVIAQSARLPLLFGTRLHAGFLLSLVAVLVFWYVFARTLWGFHLRAAGLGPRAAQ
                     VSGGIDSQRIGATALLVSGAMAGLAGGVEVSGVSYALYQNLSPGYGFTGIAVALLGGL
                     HPIGVLVAGILIGALESGAGAMQRDAGVPSVAVYVVEAVIIIVAALATAPKAGWSEVR
                     VIRRIRSSAQRVIG"
     gene            1047..1958
                     /locus_tag="VFD73_23310"
     CDS             1047..1958
                     /locus_tag="VFD73_23310"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI76906.1"
                     /translation="MDPVALAGGFLAAAVRVATPLLLAAIGETITERAGVINLGIEGM
                     MLSGALAATLGASMWGDWAGLGCAAVAGMALAGVFAVLTVGVRSDQIITGTAITLAGV
                     GLTGTVYRQAFGAQGAGLTIPTFSSLSIPGLAQIPVLGPGLFQQPVSTYLAVAALPLV
                     WVLLFRTRLGLMLRATGEAAAMARAAGVRTRLLRAGATVIGGGFAGLGGAALVLAQVG
                     TFAERMTAGRGFLAIAIVVLGRWHPAGVALAALLFGAASAMQFLFQALGVNAPYQIFL
                     MLPYLLTLLALAGAVGRVRAPGDLGRS"
     gene            complement(1959..2708)
                     /locus_tag="VFD73_23315"
     CDS             complement(1959..2708)
                     /locus_tag="VFD73_23315"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HZI76907.1"
                     /translation="MSRLSQSILSLWAWLVLVVCILLWFPVLVLVRLIAAPFDRGNYI
                     TGYLFRRIGPVMATLNPLWRFRYSGTMPKNPRRPYVVVSNHESFADILLISHLPWEMK
                     WLSKAELFRIPVMGWMMWLAGDIPVKRGFGPSAVEAMERCREVLRRRVSVMIFPEGTR
                     SKTTELLPFKDGAFRLAIEAGVPILPLALSGTGTALPKHGWRFGRSAAEVRVLDPIET
                     TGLSLDDVPALKQQVRDLIIRTRDTLAANRR"
     gene            2808..3965
                     /locus_tag="VFD73_23320"
     CDS             2808..3965
                     /locus_tag="VFD73_23320"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HZI76908.1"
                     /translation="MTEATTRFEPDVAGPAAEPGAGEPVTQPDLKKLDEVLRDRQEVR
                     SVALTGLFVLAAFYTLYFGRAFFFPIVLAVLLDFLLSPLIRALKRARIPEPLGAGLVM
                     IALLGTAGGTVYELVGPARDWVGKLPSSIHAAQDRLRQIRKPVEQVSKTAEQVEQATK
                     LTDQAKTAEVVVKGPSLTERLFGTTQTIVASAIEVIILLYFLLAAGDLFLQKLIKVLP
                     QFRDKKKAVTIARETEASISTYLVTVTLVNVGLGIAVAIVMLLLKMPNPLLWGALAAL
                     AEFVPYLGATALMTLLALAGLVTFDHVGHALLIPAAYVTVNFLQSQFISPLVLGRRLT
                     LNPVAIFVGLVFWWWIWGVPGAFIAVPLIATFKIFCDHIEALAPIGEFLGR"
     gene            3969..4442
                     /locus_tag="VFD73_23325"
     CDS             3969..4442
                     /locus_tag="VFD73_23325"
                     /inference="COORDINATES: protein motif:HMM:NF025078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4157 domain-containing protein"
                     /protein_id="HZI76909.1"
                     /translation="MSERLSERECSALGTLAASIDCSRVRVHRSEARGMRRLLRSAVL
                     WLSRGRAVALGNHIFLPDRHANDLAVLAHEVTHAGQYQRWGALTYFSRGAVAQLRDLL
                     YRATRIGRCPYRYTAVPGQPFQAYGMEQQGQIVEDSFRGDPVAQAISPFHPGRLA"
     gene            complement(4444..4848)
                     /locus_tag="VFD73_23330"
     CDS             complement(4444..4848)
                     /locus_tag="VFD73_23330"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZI76910.1"
                     /translation="MKPSLYSVAIFVNDIGRAIEFYRDALRLPLTKQGSFGAEFLEGE
                     SHLGVHPAVHPEAKSLVGRHTGITLFVPDLLHFCGDLHARGVRFTAEPTQQSWGIMAM
                     VADPDGNVLALWEDRLPDTAEHRSVDQADGTA"
     gene            complement(4856..5335)
                     /locus_tag="VFD73_23335"
     CDS             complement(4856..5335)
                     /locus_tag="VFD73_23335"
                     /inference="COORDINATES: protein motif:HMM:NF024822.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4112 domain-containing protein"
                     /protein_id="HZI76911.1"
                     /translation="MSISVQQRSAPQLERLRALTRLLDDAIPIPGTKYRFGLDAIIGL
                     VPGLGDAIGAIFSVFIVYHAARLGAPKTTLFRMMSNIGVDTIVGEIPLLGDLFDFGWK
                     ANRKNLILLEQHLNQPTAARRTSRRVLLLVALGLVLILAVVVALGIWIANMTVVKMT"
     gene            5427..>6943
                     /locus_tag="VFD73_23340"
     CDS             5427..>6943
                     /locus_tag="VFD73_23340"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HZI76912.1"
                     /translation="MHRVHADDGPEETLDPVGEAGWAEFRELAHGMVDDMLDHLSGLS
                     TQPAWRPIPTEVRAALTQAVPRTGIGADAAYREFLRLIQPYPNGNLHPRFWGWVQGNG
                     TPLGMMADMLAAGLNPHLGGFDQAPAMVEHQVIRWLAELLELPRNASGLLVTGGSMAN
                     ILGVTVARYASLKAAGVDVREHGLQGEPGASSVPRLMCYGSAETHGWAQKAVELLGIG
                     NTGFRRIAVGPEYRMDMAALGRTVARDRASGALPCCVIGTAGTVNTGATDDLEALAGF
                     CREQKIWFHVDGAFGALLKLSQSLRPIVRGLEHADSVGFDLHKWGYLPFECACILVRN
                     AELHREAFATSASYLAEESRGVIAGGLPFADRGIDLTRGFKALKVWLSFLADGSDRYA
                     RLIEQNVAQARYLTQLVEADPDLQLLAPTALNIVCFRYAPAETRGWELNDLNREILLR
                     LQERGVAVPSATVLGGQFAIRCANVNHRSTRADFRLLVEAVVDVGRELLEEAESE"
BASE COUNT         1192 a         2060 c         2329 g         1362 t
ORIGIN      
        1 ggatgggccg ttgctgcact ggtcctgggt ctgatccttc ttgcgggagg gctcgaggcc
       61 gcgggctatg acgcggcggg tgcactcggc gcgctatggt cgggtgcatt cggttcatgg
      121 tacagcatca gctcgggcac gctgcctcgc agtgtgcctc tcattctgat tgggttgggc
      181 ctggcactcg ggttccgggg aggtgcgctc aacatcggcg ccgaaggcca gttctacgct
      241 ggggcgattg ccgccacctg gatcggcctt cacgtggcgg ctcgcccggc agtgatcgca
      301 atccctgctc tgctcctggc cgccgccctt gccggcggat tgtgggtggc gcttccggtc
      361 tggctcaagc tgcggtttgg agtcatcgag gtcatcagca cgcttctcct caactttgtc
      421 gcggaagcgc tcgtgagcct gatggtgcag ggtccgctgc aggagccgac gcgagtctac
      481 cctcagagcg atgtcattgc ccagtccgcg cgtctgccgc ttttgttcgg gaccaggctg
      541 cacgctgggt ttctgctctc tctcgtagcc gtgctggtgt tttggtatgt gtttgcgcgg
      601 acgctgtggg ggtttcatct ccgagccgcc gggctcggtc ctcgcgccgc gcaggtgagt
      661 ggaggaatcg acagtcagcg catcggggcg acggcgctgc tcgtctccgg ggccatggcg
      721 ggtctcgccg gtggcgtaga agtgagcgga gtctcctacg ctctatatca gaacctttcc
      781 ccgggttacg gattcaccgg catcgcggtg gcgctgcttg gtgggctcca tccgatcggt
      841 gtcttggtcg caggcattct gatcggtgcc ctcgagtcgg gggcgggagc gatgcagcgc
      901 gatgccgggg taccctcggt ggcggtgtac gtcgtagagg ccgtgatcat catcgtggcc
      961 gcgctcgcaa cggcaccgaa ggcagggtgg tctgaggtcc gggtgattcg aaggattcga
     1021 tcatccgccc agcgagtgat cggctaatgg accctgtggc gcttgccgga gggttcctgg
     1081 ctgcggcggt gcgcgtcgct acgccgctgt tgcttgccgc catcggcgag acgatcaccg
     1141 agcgcgcagg ggtgatcaat cttggcatcg aggggatgat gctgtcgggc gcgcttgccg
     1201 cgacgctggg cgcaagcatg tggggcgatt gggccggatt gggctgtgcg gcagtggctg
     1261 gaatggcgct cgcaggagtg tttgccgtgc tcacggtcgg ggtgcggtcc gaccagatca
     1321 tcaccggcac cgccatcacg cttgcagggg taggactgac cggtacggtg taccgccagg
     1381 cattcggcgc gcagggggcc ggactcacca tcccgacatt ctcgtctctc tcgattccgg
     1441 gcttggctca gatcccggtg ctcgggccgg gacttttcca gcagccggtt tccacctatc
     1501 tcgcggtagc cgcgctcccc ttggtctggg ttctactgtt tcgcacgcga ctgggactga
     1561 tgctccgggc cacgggtgag gcggctgcca tggcgcgcgc ggcgggagtg cgaacccgac
     1621 tcttacgggc gggcgccacc gtgatcggtg gaggctttgc cggattgggc ggagcagccc
     1681 ttgtgctcgc acaggttggc acctttgccg agcggatgac ggcaggccga ggctttctcg
     1741 ccatcgcgat cgtagtgctg ggtcggtggc accccgcggg ggtagcgctc gcagcgctcc
     1801 tgttcggggc ggccagcgca atgcaatttc tctttcaggc gcttggggtc aacgcaccct
     1861 accagatctt cctcatgctt ccgtatctgc tcaccttgct ggcgctggcc ggagcagtcg
     1921 gtcgagtccg ggcaccgggc gacttaggac gttcctagtc agcggcggtt cgcggcgaga
     1981 gtgtctcggg tgcggatgat caagtcacga acctgctgtt tcaaggcggg cacatcgtcc
     2041 agcgagaggc cggtggtctc gatgggatcg aggacgcgga cctcggcggc agatcgtccg
     2101 aagcgccagc cgtgtttcgg cagcgcggta ccggtccccg acagcgcaag aggaagaatg
     2161 ggaacgcccg cttcgatggc gagacggaac gcgccgtcct tgaagggaag cagctccgtg
     2221 gttttcgacc gggtgccctc ggggaagatc atgaccgata ctcggcggcg tagcacttca
     2281 cgacagcgtt ccatggcttc gaccgcactg gggccgaatc ctcgtttcac gggaatatct
     2341 ccggccagcc acatcatcca gcccatgacc ggaatgcgaa acagctccgc tttcgatagc
     2401 catttcattt cccaggggag atggctgatc agcaggatgt cggcgaacga ttcgtgattg
     2461 gacactacga catagggccg tcgcggattt ttcggcatcg ttcccgaata gcgaaaccgc
     2521 cagaggggat tcagcgtcgc catgaccggt ccgatgcggc gaaagagata accggtgatg
     2581 taattgccgc gatcgaacgg agcagcgatt aaccgcacga ggacaaggac gggaaaccac
     2641 aacagaatgc agacaaccaa gaccagccag gcccacagcg ataggatcga ttgcgagagg
     2701 cgtgacatgc ggctctattc cgaacaaaat gcgtggtggg tttgccggga cacgggcgct
     2761 cggtcgagag tcggcaacct actgccctcg aactgggagg gacaagggtg actgaagcga
     2821 ccacgcgatt cgagccggac gtcgccggac cggcagctga gccgggtgcc ggcgagcccg
     2881 tgacccaacc ggacctcaag aagctggacg aagtactccg tgatcggcag gaggttcgct
     2941 ctgttgcgct caccggactc ttcgttcttg ccgcgttcta cacgctgtac ttcggccgcg
     3001 ctttcttctt cccgatcgtt ctcgctgtgt tgctcgattt tctgttgagc ccgctcatcc
     3061 gcgcgctcaa acgggcacgg attcccgagc cgctcggcgc tgggctggtc atgatcgctc
     3121 tgctcgggac cgcgggcggc acggtttacg agctggtggg tccggccagg gactgggtgg
     3181 gcaagctccc gagcagcatt cacgccgctc aggacagatt gcggcagatc cggaagccgg
     3241 tcgagcaggt gagcaagacc gccgagcagg tggagcaggc gacgaagctc accgatcagg
     3301 ccaagaccgc cgaagtggtg gtgaaaggcc cttcgctcac cgagcggctc ttcggcacca
     3361 cgcagacgat cgtcgccagc gcaatcgagg tgatcatcct cttgtacttt ctgctggctg
     3421 caggcgatct ctttctgcaa aagttgatca aggtgctgcc gcagttccga gacaaaaaaa
     3481 aggcggtcac cattgctcgt gagaccgaag cgtcgatttc cacctacctg gtgacggtca
     3541 cgctggtgaa tgtcggcctg gggatcgccg tcgccatcgt gatgctttta ctcaagatgc
     3601 caaacccgct gctctggggc gcactcgcag ctctcgccga gttcgtgccc tatcttggcg
     3661 ccaccgcgct gatgacgtta ttggcgctgg cggggctggt caccttcgat catgtgggtc
     3721 atgcgctgct gatacccgcc gcctatgtca cagtaaactt tctgcagtcc caattcatca
     3781 gcccgctggt cctcggccgc aggctcacgc tgaatccagt ggcgatcttc gtcggtctgg
     3841 tgttctggtg gtggatctgg ggagtgcctg gtgcgttcat cgcggtccca ctgatcgcca
     3901 cattcaagat tttctgcgat cacatcgaag cgctggcacc catcggagaa tttctcgggc
     3961 gctgatcgat gtctgagcgg ctgagcgagc gtgaatgcag cgcgttaggt accctggcgg
     4021 cgagcatcga ctgcagccga gtccgagtgc atcgcagcga ggcgaggggt atgcgtcggc
     4081 tgctccggtc cgcggttctt tggctaagcc gtggccgcgc cgtggcgctg ggcaaccaca
     4141 tctttcttcc cgatcgccat gccaatgatc tggcggtgct ggcccatgaa gtgacgcacg
     4201 ccgggcaata tcaacgctgg ggagccttga cctacttcag ccgtggcgcc gtcgctcagc
     4261 tgcgggatct cctataccgc gcgactcgga ttggccggtg cccctaccgc tacaccgcgg
     4321 ttccgggaca gccgtttcag gcgtatggaa tggagcagca ggggcaaatc gtagaggatt
     4381 ccttccgggg cgatcctgtc gcgcaggcca tctcgccctt tcatccaggc cgcctagcct
     4441 agctcaggct gtgccgtccg cctgatcgac ggaccgatgc tctgcggtat cgggcagccg
     4501 gtcttcccag agtgccagca cgtttccgtc cggatcagcc accattgcca tgattcccca
     4561 cgactgctgg gtgggctcag cggtgaaccg gacgccgcgg gcatgcaggt ccccgcagaa
     4621 gtgcagcagg tcgggaacga agagggtgat gccggtgtgt cgcccgacca gcgactttgc
     4681 ctcggggtgt accgcggggt gcacacccag atggctctcg ccttccagga actccgcacc
     4741 gaacgagccc tgcttggtga gcggcagacg caacgcatcg cgatagaact cgatggcgcg
     4801 gccaatatcg ttgacaaaaa tcgcaacgct gtaaagagag ggcttcatac gcggctcacg
     4861 tcattttgac gacggtcata ttggcaatcc agatgccgag agcgaccacg accgcgagga
     4921 tcagcaccaa tcccaaggct accagcagga gcacgcgccg actggttcga cgggcggcgg
     4981 tgggctgatt gaggtgctgc tccagcagaa tcagattctt tcggtttgcc ttccagccga
     5041 aatcgaagag gtcgcccaga agcgggatct cacctacgat ggtatcgact ccgatattcg
     5101 acatcatgcg gaagagtgta gtcttcgggg cgcccagccg ggcagcgtgg tagacgatga
     5161 agaccgagaa gatcgctccg atagcgtctc ccaggccggg aaccaggccg atgatggcat
     5221 ccaggccgaa tcggtacttc gtccccggaa tgggaatcgc gtcgtccagc agccgcgtaa
     5281 gtgctcggag ccgctctagc tgaggtgcgg agcgctgctg cacagaaatg ctcatactga
     5341 atagtaaggc cggcaccgat ttgggcgcat gatccgggtg gcgaaggcgg ccgagtcgtt
     5401 cgactctagg aaagaggaga gcgggaatgc acagagttca cgcggatgac gggccggagg
     5461 agacgctcga tccagtgggt gaggcgggct gggccgagtt tcgggagctt gcccacggca
     5521 tggtggacga catgctggac catctctcgg gattatctac acagccagct tggcgaccga
     5581 ttcccaccga ggtacgagct gctctcactc aggccgtgcc gaggaccggc attggtgccg
     5641 atgccgcgta ccgggagttt ctccggctga tccaacccta tccaaacggc aatctgcatc
     5701 cgcggttttg gggctgggtg cagggcaacg gcacgccact gggtatgatg gccgacatgt
     5761 tggctgccgg cttgaatccg caccttggtg gatttgatca ggccccggca atggtcgagc
     5821 accaggtgat ccgctggctt gcagagttat tggagcttcc ccgtaacgcg agtggcctgc
     5881 tggtcaccgg tggatcgatg gcgaacatcc tcggcgtgac ggtcgcgcgc tacgccagtc
     5941 tcaaggccgc cggcgtggat gtgcgggagc acggattgca gggtgagccc ggggcatcga
     6001 gtgtcccgcg tctgatgtgc tatggctctg ccgagacgca tggctgggcg caaaaggctg
     6061 tggagctcct ggggattgga aacacaggat tccggcgaat cgctgtagga cccgaatacc
     6121 gaatggacat ggcggcactg ggccggacgg tagctcggga ccgggcttcc ggagcgttgc
     6181 cctgctgcgt tatcggaact gcgggaaccg taaacaccgg agcaaccgac gatctcgagg
     6241 cactggccgg gttctgccgg gagcagaaga tctggtttca cgtcgatggc gcattcggcg
     6301 cactcctgaa gctctcccaa agcctcaggc ccatcgtgcg cggactggaa cacgctgatt
     6361 cggtcgggtt cgacctgcac aaatggggat acctgccgtt cgaatgcgct tgcatcctgg
     6421 tgcgaaatgc ggagctgcac cgggaggcat tcgccaccag tgcgagctac ctcgccgaag
     6481 agtctcgagg cgtcattgca ggcggacttc cctttgcgga ccggggcatc gatctcactc
     6541 gcgggttcaa ggcgctgaag gtgtggctgt cgtttctggc ggatggcagc gatcgctatg
     6601 ccagactcat cgagcagaac gtggcccagg cgcgctacct cactcagctg gtggaggccg
     6661 atcccgatct acagctgctc gcgcctaccg cgctcaacat cgtgtgcttt cgttacgcgc
     6721 cagcggagac gcgcggctgg gagctcaacg acttgaaccg ggagatcctg cttcgcctcc
     6781 aagagcgcgg agtggcggtg ccatccgcaa cggtgctggg tgggcagttc gccatccgct
     6841 gcgccaacgt gaaccaccgg agtacgcgcg cagactttcg cctgttggtc gaagcggtgg
     6901 tggatgtcgg gagagagctg ctggaggaag cggagtctga gag
//
LOCUS       DASRPQ010002057         1596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_865772, whole genome shotgun sequence.
ACCESSION   DASRPQ010002057 DASRPQ010000000
VERSION     DASRPQ010002057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_865772"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            14..1051
                     /gene="hrcA"
                     /locus_tag="VFD73_23345"
     CDS             14..1051
                     /gene="hrcA"
                     /locus_tag="VFD73_23345"
                     /inference="COORDINATES: protein motif:HMM:TIGR00331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HZI76913.1"
                     /translation="MPVSDQLSERELRVLEAVVQTYIETAEPAGSQTIARKFGLGVSP
                     ATIRNTMSELEDKGYLFHPHTSAGRIPTDRAYRIYVDTIMRLSPPSDQEQHTLRAELM
                     GTRSAVEEFLRRAAQVLGVLTQELGVAVAPAFDQVVLERLELVQVSSDRLLLVFNLKS
                     GVVRTIFVEVPGIVAPSLVQQVAQILNERLSGLTLKEIRATLPDRLRDASGSEAGREL
                     LNIFIAEGDGLFDLSSQGTPVVLGSAQMLADQPEFASNTRMRELLRLTEGRDLLRQAL
                     ESRRQRGISVTIGAENPDARLSDFTLVTSSYEVGGLKGVIGVMGPTRMPYDKIIGLVE
                     HTSRLVEGLLE"
     gene            1048..>1596
                     /locus_tag="VFD73_23350"
     CDS             1048..>1596
                     /locus_tag="VFD73_23350"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HZI76914.1"
                     /translation="MSEFYSLLGISREASDTEIKKAYRKLAMEYHPDRNPSPQAEAKF
                     KEITEAYEVLRDPQKRAMYDRYGKAGLSGAGGGYGFHHVDLSEALNIFMRDFGAMGGF
                     ESLFGGRRSRTEERRGQDIRVTVRLTLSEVALGAKKTVKLKSLERCQTCEGSGAKPGT
                     QPTTCSTCNGSGEVRRATRSMFG"
BASE COUNT          310 a          481 c          516 g          289 t
ORIGIN      
        1 ctagatttct gccatgccag tgtcagacca gttgagcgag cgagagcttc gggttctcga
       61 agctgtcgtg cagacctata tcgagacggc cgagcctgcg gggagtcaga ccatcgcccg
      121 gaaattcggc ttgggcgtgt cacccgccac catccgaaat acgatgagcg agctggaaga
      181 caaaggctat ctctttcacc cacatacctc tgcgggccgg ataccgaccg atcgggccta
      241 ccgcatctac gtagacacca tcatgcgact ttccccgccc agtgaccagg agcagcacac
      301 gcttcgggcg gagctgatgg gaacccggag cgcggtggag gaattcctcc ggcgggcggc
      361 tcaggtactg ggggttctca cccaggagct cggcgtagcc gttgctcccg ctttcgacca
      421 ggtcgttttg gagcggctgg agctggtaca ggtgagctcg gaccgcttgc tgctggtgtt
      481 caacctcaaa agcggggtgg tgcgcaccat cttcgttgag gttccaggga tcgttgcgcc
      541 aagcctggtg cagcaggtcg cccagatcct gaacgagcgg ctttcgggcc tgaccctgaa
      601 ggaaattcga gccaccctcc ccgataggct tcgggatgcg agcggcagtg aagccggtcg
      661 tgagctgctc aacatcttca ttgccgaggg cgacggcttg ttcgacctct ccagccaggg
      721 aactccggtg gttctcggca gtgcacagat gctggcggat cagcccgagt tcgcctcgaa
      781 cacgcggatg cgcgagctgc tccgactgac cgaaggccgc gatcttctga ggcaggctct
      841 ggaatcacgc cggcagcgcg gaatttccgt caccatcggc gcggaaaatc ccgacgctcg
      901 gctcagtgac tttaccctgg tcacttcctc gtacgaggtc ggtggcctca agggcgtcat
      961 tggggtcatg gggcccaccc gcatgcccta cgacaagatc atcgggctgg tggagcacac
     1021 cagccgtctc gtggaaggat tactggagtg agcgagttct actctctgct gggcatctcg
     1081 cgcgaggcct ccgatacgga gatcaagaag gcctatcgga agctcgcgat ggaataccat
     1141 ccagaccgta atccctctcc tcaggcggaa gcgaagttca aggagatcac cgaggcatac
     1201 gaggttctcc gcgatccgca gaagcgggcc atgtatgacc ggtacggcaa ggcaggtctg
     1261 agcggagccg gcggcggcta tggattccat cacgtcgacc tcagcgaagc gctcaacatc
     1321 ttcatgcgcg acttcggcgc catgggcggg ttcgaatcgc tgttcggcgg gcggcggagc
     1381 cggactgaag aacgccgcgg tcaggacatc agggtcaccg tgcggctcac cttgtccgag
     1441 gttgccctgg gggcaaagaa gacggtcaag ctcaagagcc tggagcgctg tcagacgtgc
     1501 gaaggaagcg gtgcgaagcc ggggactcag cccaccacgt gctcgacctg caacggcagc
     1561 ggggaagttc gccgggccac tcgcagcatg ttcggc
//
LOCUS       DASRPQ010002058         1681 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2426188, whole genome shotgun sequence.
ACCESSION   DASRPQ010002058 DASRPQ010000000
VERSION     DASRPQ010002058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2426188"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(239..859)
                     /locus_tag="VFD73_23355"
     CDS             complement(239..859)
                     /locus_tag="VFD73_23355"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HZI76915.1"
                     /translation="MAIFLLIRHGMCDPVGRSIAGRAPGVSLNARGRQQAKALARRLS
                     SLEIEAVFSSPLERALETARPIADERGLQVQTLAGLNEIEFGEWTGRALEDLAPAAQW
                     QLFNRYRSGTRIPGGETMLEVVARSVKELERLQQTHSEGSLVAVVSHGDVLRALIVHS
                     LGMSLDLMFRLELDPASVSVLDLASQGPRLLLLNGGDEWPSTLPRR"
     gene            986..>1681
                     /locus_tag="VFD73_23360"
     CDS             986..>1681
                     /locus_tag="VFD73_23360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76916.1"
                     /translation="MKLVVFGLSVSSSWGNGHATLWRGLIRALGAQGHRVLFYERDLP
                     FYAEHRDLQRLEGGELHLYPSWETVRPDALADVRDADVAMVTSYCPDGIAATELVCSS
                     ARGLRAFYDLDTPVTLDRIRNGHPVPYLGPDGLAGYDLVLSYTGGAALTALQEHLGAR
                     RVVPLYGSVDPEVHYPVPPMERFRADLSYLGTYAEDRQQALLQLFITPARQLPDRRFL
                     IGGAQYPQQFPWSD"
BASE COUNT          312 a          535 c          524 g          310 t
ORIGIN      
        1 gacccgggaa ctcaggtcgg atcgctcctc gcgcctgggc gaacggccgc atcaccctga
       61 ccgctgacct gacgcttaag tttggctggt gttactcggc aaggagttag cggcaactta
      121 cctcggacgt tggctgccgc cgccgggggg cgagggtcac gagggggtcg ctaggggcga
      181 caaccttcgg taggtgggaa gtcgaatttc tcctcgatac cgcatcctgc actgcggatc
      241 aacgtcgcgg caacgtgctg ggccactcat ccccaccatt cagcagcagg aggcgaggtc
      301 cctggcttgc caggtccaga acgctgaccg aagccggatc gagctccagc cggaacatca
      361 aatcgagaga catccccagg ctgtgcacaa tcagggcacg cagcacatcg ccatggctga
      421 cgacggccac cagcgaaccc tcagagtggg tctgctggag tctctcgagc tccttgactg
      481 accgcgcaac gacctccagc atcgtttcac cgccagggat tctggttcca ctgcgatagc
      541 ggttgaacag ctgccactgc gccgcaggtg cgaggtcctc gagcgcacga ccggtccact
      601 ccccaaactc gatctcgttc agcccagcca gtgtctggac ctggagaccg cgttcgtcgg
      661 caatgggccg ggctgtctcc agcgctcgtt ccagcggact gctaaacacc gcctcgatct
      721 cgaggctgct caggcgccgg gccagcgctt tcgcctgctg ccggccccga gcgttgagag
      781 agacgccggg tgcgcgaccg gcgatgctgc gcccgacggg gtcacacatg ccgtgtcgaa
      841 tcaggagaaa gattgccatt tacaggatca aagaagggcc aaaccgcaca gattcaatgt
      901 gacctgactc atccacaagg ccgcaacgta agtacacctt gagagggtaa gaacggcgtt
      961 tcgtcactac acatcgttgc taggaatgaa gctagtcgtc ttcggtttat ccgttagttc
     1021 gtcgtggggc aatggacacg caactctctg gcggggcctg atcagggcgc tgggcgcgca
     1081 aggccaccgg gtgctgttct acgagcgcga tctgccgttt tacgctgagc accgcgatct
     1141 acagcggctg gagggtggtg agcttcacct ctaccccagc tgggaaacag tccgtccgga
     1201 tgccttggcc gacgtccggg acgcggacgt ggccatggtc acgtcgtact gtccggacgg
     1261 gatcgcggca accgagctgg tgtgctccag cgcccggggt ctgcgagcat tctatgacct
     1321 cgacacgccg gtgacgctcg atcgcattcg gaacggccac ccggtaccct acctcggacc
     1381 cgacggactc gccggctacg atctggtgtt gagctatacc ggcggcgccg cattgacggc
     1441 attgcaggag cacctgggcg cccgcagagt cgtgcctttg tatggcagcg tcgacccgga
     1501 agtgcattac ccggtgcccc caatggagcg gtttcgtgca gacctgtcct acctgggtac
     1561 ctacgccgag gatcggcagc aggcactcct gcagctgttc attacgcctg cgagacagct
     1621 gccggatcgg cgattcctga ttgggggtgc ccagtatcct cagcagttcc cctggagtga
     1681 c
//
LOCUS       DASRPQ010002059         1199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4003037, whole genome shotgun sequence.
ACCESSION   DASRPQ010002059 DASRPQ010000000
VERSION     DASRPQ010002059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4003037"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..932
                     /locus_tag="VFD73_23365"
     CDS             <1..932
                     /locus_tag="VFD73_23365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76917.1"
                     /translation="EANILLRWLNVRLVPHLPCRHDCEPTAALGRKYHALMHQVGHQK
                     EAEWILDILSWPMEWSALHGIAEIKTPVCKISTATDATAHKLVVRRAGTTYPEEGASG
                     LSFPYQAPTGVQITKGKSFARSIVAVTAADNWLQNGFSSQTAMDAAHDVLLAALSAGR
                     FQPGVVYDPGCGNGLLLEKICAMHPQLTPAGVDADRLRALAAKRRLSQGDFSFGDLHD
                     PKVRPGGPFELVVLYPGRLTEESDLSRRAATREHLLHAKWILCYAYSDNLQRPLTELM
                     QEAGIPVEIGKTHTSTPTAEAMLVELVEEGVHA"
     gene            967..>1199
                     /locus_tag="VFD73_23370"
     CDS             967..>1199
                     /locus_tag="VFD73_23370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76918.1"
                     /translation="MDRFDSLIAQALGRLTTRLAVIFDREPGTVGTQMLRCGAEFNGL
                     RGDCFIVENTETGAFKIIDFQDSDASPAVQLAPS"
BASE COUNT          227 a          366 c          396 g          210 t
ORIGIN      
        1 cggaagccaa catcctgctg cggtggctca atgtgcgctt ggtgccgcat ctgccctgcc
       61 ggcatgactg cgagccgacc gcggcgctgg gacggaagta tcacgcactg atgcaccagg
      121 tcgggcacca gaaggaagcc gagtggattc tggacatcct ctcctggccg atggagtggt
      181 cggcgctgca cggcatcgca gaaatcaaaa cgcccgtatg taagatctcc acggcgactg
      241 acgccaccgc gcacaagctg gtggtgcggc gggcgggcac gacgtatccc gaggaggggg
      301 cgtcagggct ctcgttcccc tatcaagcgc cgacgggagt gcagatcacc aagggcaaga
      361 gcttcgcgcg gagtatcgtc gctgtgacgg ccgcggacaa ctggctccag aacggattca
      421 gttcgcagac ggcgatggat gcggcccacg atgtcctcct ggcagcactc tccgcgggcc
      481 gattccaacc aggggtggtc tacgatccag gatgcggcaa cggcctgctc ctggagaaga
      541 tctgtgccat gcacccccaa ctcacgcccg cgggcgtcga tgcggatcgg ctccgggcct
      601 tggcggccaa gcgccgcctg tcccagggcg acttctcctt cggcgacctg catgatccca
      661 aggtcaggcc aggagggccg tttgagttag ttgtccttta tcctggccga ctcacagagg
      721 aaagcgatct gtcccggagg gcggcaacga gggagcatct attgcacgcc aagtggatct
      781 tatgttacgc gtacagtgac aacctccagc gcccgctgac ggagctgatg caggaggcag
      841 ggattccggt cgagattggt aagacgcaca cttcaacgcc caccgccgag gcgatgctgg
      901 tcgagttggt ggaagagggg gttcatgctt gagctgcgag tcttgacgta cggagggaag
      961 ttctcgatgg atcggttcga cagcctgatc gcgcaagcgc tcgggcggtt gaccacacgg
     1021 ctcgccgtca tcttcgatcg cgaaccgggc accgtgggca cacaaatgct ccggtgcggc
     1081 gccgagttca atgggctccg cggtgactgc ttcatcgtcg agaacaccga gacgggcgcc
     1141 ttcaagatca tcgacttcca ggattcggat gcgagcccgg ccgtgcagct cgcgccgtc
//
LOCUS       DASRPQ010002060         2133 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3711738, whole genome shotgun sequence.
ACCESSION   DASRPQ010002060 DASRPQ010000000
VERSION     DASRPQ010002060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2133
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3711738"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2133)
                     /locus_tag="VFD73_23375"
     CDS             complement(<1..>2133)
                     /locus_tag="VFD73_23375"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76919.1"
                     /translation="RLTRAGIAIGTPLYMSPEQATAEDAVDARSDQYSLGCVLYEMLA
                     GEPPFTGPSNQSIIAKSLSAPRPHVTRVRSEVPAEMEQVVLRALALEPAERYPDMDAF
                     GAALQKARVVPDRRTRRRFYVAGTLALLGAAAAGGWVATRPAIHHRVAPAAETLAVLP
                     FRTSGPNVDFLGEGMMDLLATNLKGVGGINTVDPRAVLREWSSASGSNDLTRGLAVGR
                     NLDAGSVVLGSAVSTGGRVRVAADLYSINGERLGQAQVDGPTDSVLGVVDKLSLALLK
                     DVWRSKEPIPNLRVASLTTDSIQALRSYLEGERFYRRLAWDSALTAYTRAIEADSTFA
                     LAHLRRAQVYGWTGGYGSKESHEAVAAGTRFAGRLGPRDRRLLVGYQLFDQGKPAAID
                     SLTEFVRNYPDDVEGWYLLGESLFHIRGFRPVSPDSISAVFDSVLRRDSTLFPALIHP
                     LDLAIMYRDSARYARYFPAFAHTASAGEVAALKTAAGMIWGPPPTLRTITSALANHPS
                     WIVMALGSEYRWPAATSDTLLHSLAEAQKPSGKLPQYLVRWLSLRAPVTAGLGRWREA
                     SVLTDSLQPLDPDKAGDVRVWSVALGLAPPALDPVVDSVVAKFPPGPESEYAHAMLEL
                     FRGKITDGRRRVARALAARDARLMPHDIHGLLVATDGWGLLQQHDTAAGLVRLRSGLD
                     MAAAPGTLEETAYFRFQLALALAAGTNT"
BASE COUNT          382 a          704 c          710 g          337 t
ORIGIN      
        1 gggtattcgt gccggcggcc aatgcgagag cgagttgaaa gcgaaagtag gcagtttcct
       61 ccaacgtgcc gggcgcagcc gccatatcca gcccggacct gaggcgcacg aggcccgctg
      121 cggtatcgtg ctgctgcagc agtccccatc cgtcggtcgc gaccaggagg ccgtgaatgt
      181 cgtgcggcat gaggcgggca tcgcgagctg ccaatgcccg ggccacccgc cggcggccat
      241 cggtaatctt cccccggaat aactccagca tggcgtgggc gtattccgac tctggtcccg
      301 gtggaaattt ggccacgacg gagtccacca ccgggtcgag cgccggcggg gcgagcccaa
      361 gcgctaccga ccagactctc acatccccgg ccttgtccgg atccagcggt tgtagcgagt
      421 cggtcagtac cgacgcctcg cgccagcggc ccagtcccgc cgtgaccgga gcccgcaagc
      481 tgagccagcg gacgagatac tgaggcagct tccccgaagg cttttgcgct tccgccagtg
      541 aatgcaagag cgtatctgag gtcgcagcgg gccatctata ctcggagccg agggccatca
      601 cgatccagct cgggtgattt gccaaggcgc tcgtaatcgt tcgtaacgtc ggaggtggac
      661 cccagatcat gccggctgcg gtcttgagcg cggccacttc gccggcagag gcggtatggg
      721 cgaacgccgg gaaatagcgg gcatagcggg cgctatcccg gtacatgatg gcaagatcga
      781 gcgggtgaat cagcgccggg aacagcgtcg aatcccggcg cagcacgctg tcaaagacag
      841 ccgaaatcga atccggcgat accggccgga agccccttat gtggaacagc gactcgccca
      901 gtaagtacca gccttcgaca tcgtcgggat agttcctcac gaactcggtc agcgaatcga
      961 tcgcggccgg cttcccctga tcgaacagct ggtagcctac caggagccgt cggtcgcgcg
     1021 ggcctaaacg tcccgcgaac cgggtaccgg ccgccaccgc ctcgtgcgac tccttgctac
     1081 cgtatccgcc ggtccagccg tacacctggg cccgacgcag gtgcgcgaga gcgaaggtgg
     1141 aatcggcctc gatggctcgg gtatatgccg tcagcgcgga atcccaggcg agccggcggt
     1201 agaaccgttc tccctcgagg taggagcgga gcgcctggat cgaatcggtg gtcagcgagg
     1261 cgactcgcag attggggatc ggctccttgg accgccagac gtccttgagc agcgccaggc
     1321 tgagtttgtc cacgactcca agcacgctgt ccgtggggcc atccacctgg gcctggccca
     1381 ggcgctcgcc gttgatgctg tagagatcgg cagcgactcg aacccgtcca ccggtggaga
     1441 ccgcgcttcc cagcacgacc gaacccgcat ccagattgcg ccccacggcc agcccccgag
     1501 tcaggtcatt cgagccggaa gccgagctcc attcgcggag caccgcccgg ggatcgacag
     1561 tattgatccc ccccacacct ttgaggttgg tggccaggag atccatcatc ccttcgccca
     1621 ggaagtccac gttgggtccc gaggtgcgga acggaagcac ggcgagcgtc tccgccgcgg
     1681 gggccacccg gtgatggatt gctgggcggg tggcgaccca cccaccggcc gccgcggccc
     1741 cgagcagcgc aagcgtcccg gcaacgtaga agcggcgtcg ggtgcgccga tcgggaacca
     1801 cgcgggcctt ctggagcgcc gcaccgaatg cgtccatatc gggatagcgc tctgccggct
     1861 ccaacgccaa ggcacgcagc accacctgct ccatctcggc tggaacctcg gatctgaccc
     1921 gcgtgacatg agggcggggc gcactgaggc tcttggcgat gatcgattga ttgctgggtc
     1981 cggtgaacgg aggctcgccc gcaagcattt cgtagaggac acagccgagg ctgtactggt
     2041 cgctccgggc gtcgaccgcg tcctcggcgg ttgcctgctc cgggctcatg tagaggggag
     2101 ttccgatggc gatgccggcg cgggtaagcc tgg
//
LOCUS       DASRPQ010002061         1462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_866296, whole genome shotgun sequence.
ACCESSION   DASRPQ010002061 DASRPQ010000000
VERSION     DASRPQ010002061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1462
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_866296"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1310
                     /locus_tag="VFD73_23380"
     CDS             <1..1310
                     /locus_tag="VFD73_23380"
                     /inference="COORDINATES: protein motif:HMM:NF014428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="filamin/ABP280 repeat domain-containing protein"
                     /protein_id="HZI76920.1"
                     /translation="TLSTTAGEQLVEAHVPPIASPTNSSVTFHVSAAPESAESLVPVA
                     GDSQSAQVLLALPESLVVQAVDRFGNGVPGVEVTWEAKNGGEVSPENVTTGADGRAAT
                     QRMLGKDPGTYSTDARSAALDAPAVSFNATAVAPPSPALVIVTQPSAQARAGLPFDTQ
                     PQLRLQDAFGAPLATEGVSVTVQVASGDASLGGKTTAKSDATGAVSFGDLQLRGKVGP
                     QTLIFAAEGFTPVTSQSITLNPGPPAAGHTSISLPDGTAGVRTNLGLHLADQFGNAIT
                     GAAGSLSVTIVGANPTSGVSVTEMGDGDYAASYVPVHTGKDQAQVEFSGTPLPGSPFE
                     TTVDPGPSDPGHTTADVSRTNGLFNRVSGVVTVRDAQGNPVGHGGDRVQVSVNGTDVT
                     PSVRDNRDGTYSFGFFGFGSQFSVVISLNGQPIQGSPYTPVVQ"
BASE COUNT          274 a          449 c          463 g          276 t
ORIGIN      
        1 acaccttgag tacgactgcc ggtgaacagt tggtcgaagc ccacgtccct ccgatcgcat
       61 caccgaccaa ctccagtgtc acctttcatg tgagcgccgc tccggagagc gccgagagtc
      121 tggttccggt ggcgggtgat agccaaagcg cgcaggtcct gcttgccctg ccggagtcgc
      181 tggtggtcca ggcggtggac cggttcggca acggtgtccc cggagtcgag gtcacctggg
      241 aggcaaagaa cgggggcgag gtaagtcccg aaaatgtgac gaccggtgcc gacggtcgcg
      301 ccgccactca gcgcatgctt ggtaaagacc ccggcacata tagcacggac gctcgctcag
      361 cagcactcga tgcgccggca gtctcgttca acgcgaccgc ggtggcaccg cccagtcctg
      421 ctctggtcat cgtgactcag ccatcagccc aggccagggc tggcctgccc ttcgatactc
      481 agccccagct ccggctgcag gatgcttttg gagccccact cgcgaccgaa ggtgtgagcg
      541 tcacggttca ggtcgcgagc ggtgacgcat cgctgggcgg gaagacgacc gcaaagagcg
      601 atgccaccgg ggcagtgagc tttggtgatc tccagctccg agggaaggtt ggtccccaga
      661 cgctcatttt tgcggccgag ggtttcactc cggtgacctc ccagtccatc acgctgaacc
      721 ctggtccacc agctgcagga cacacatcca tttcgcttcc tgatgggacc gccggtgtca
      781 ggacaaatct cggtctacac ctcgcggatc aattcggaaa cgcgatcacc ggggcagcgg
      841 gctcactgag cgtgaccatc gtcggcgcca acccgacgag cggcgtgtcc gtgactgaga
      901 tgggagacgg agactacgcc gcctcctacg tgccggtgca taccggcaag gaccaggctc
      961 aagtggagtt ctcgggcacg cctctgccgg gaagtccttt cgagaccact gttgatcccg
     1021 ggccgtccga tcccggccac accacggcgg acgtgtcgag aaccaacggc ctcttcaatc
     1081 gggtaagcgg agtggtcacg gttcgggatg cccagggaaa tccggtgggt catggcggcg
     1141 atcgggtcca agtcagtgtc aatggaaccg atgtgacgcc gtcggttcgc gacaaccggg
     1201 atggcacgta ttctttcgga tttttcggct tcgggtccca gttcagcgtt gttatttcat
     1261 tgaatggtca gccgatccaa gggagcccgt acaccccggt tgttcagtga gggaaacgcc
     1321 ggctgagcga tcagcttagt cacagctcag caatcactta gtggattaca gcagggttga
     1381 ccggtctttt agcggccgct atcttccacg gccgccgcgc cctggtggtg aaactggtag
     1441 acacgctatc ttgagggggt ag
//
LOCUS       DASRPQ010002062         2154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_247725, whole genome shotgun sequence.
ACCESSION   DASRPQ010002062 DASRPQ010000000
VERSION     DASRPQ010002062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_247725"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..460
                     /locus_tag="VFD73_23385"
     CDS             <1..460
                     /locus_tag="VFD73_23385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76921.1"
                     /translation="DVEKSYGHFVRHFGKPAGFSSPGFYSDERVMALLEQLGFLYNGD
                     AIGGEPRRALVAGKPVSHWTIPVTLSGPRTIPFLEYHGARGTPETEVLRLLGQHLDEH
                     ESVVLYGHPCYEGVRDRVLRQVFATVLERGFRFVTMLTMAEQLRAVPTAR"
     gene            457..1569
                     /gene="wecB"
                     /locus_tag="VFD73_23390"
     CDS             457..1569
                     /gene="wecB"
                     /locus_tag="VFD73_23390"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016634935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HZI76922.1"
                     /translation="MIRVLSVFGTRPEAIKMAPVVHALQQAPNSFESIVCVSAQHRAM
                     LDQVLGVFGLSADYDLDLMTSGQSPAEVTARVLERLPALLRQVRPDVLLVQGDTMTTF
                     AAAFAAYLERIPSGHVEAGLRTGDRYQPFPEEMNRVMTTRLASIHFAPTEQARSALLA
                     EGVPASDVHLTGNTVIDALLQTVRPDYRFRSPKLAALDPGRRLVLITTHRRESFGAPL
                     QSTCAAIRDLAERFPDLQFVLPVHPNPEVKQTVERLLCDLAGMYLIDPVDYLEFVHLM
                     NRSYLVLTDSGGVQEEAPSLGKPVLVLREVTERPEGVQAGTAVVVGTNRERIVEMASK
                     LLTSRDAYRKTANAVNPYGDGHASARIATALAERFG"
     gene            1566..>2154
                     /locus_tag="VFD73_23395"
     CDS             1566..>2154
                     /locus_tag="VFD73_23395"
                     /inference="COORDINATES: protein motif:HMM:NF013255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HZI76923.1"
                     /translation="MRLLVTGGTGFIGSHLAEEGRRRGAEVIAFGLTDRPEEQANAER
                     LKKLGAEVLPGSITDAELCRQAMRGVTHVFHLAVAMREGGKSDEFFESINLDGTRHLL
                     EAASVQRVERFVYCSTIGIYGHRAPGITREDSPLAPGNIYERTKVSAERLVREFAEKC
                     DLPSVVLRPADVYGPRDQRLLKMFKGVSRGRFPLFG"
BASE COUNT          349 a          653 c          735 g          417 t
ORIGIN      
        1 cgacgtggag aagtcgtatg ggcattttgt gcgacacttc ggaaagccgg cgggcttttc
       61 gtcacccggc ttctactccg acgagcgggt gatggcgttg ctggagcagc tcgggttctt
      121 gtacaacggc gacgccattg ggggcgagcc ccggcgtgcc ctggtggccg gtaagccggt
      181 gagccactgg accattccgg ttacgctctc gggtcctcgt accattccct ttctcgagta
      241 tcacggcgcc cgcggaactc cggagaccga agtgcttcgc ttactgggtc agcacctcga
      301 tgagcacgag tcggtggtgc tctatggtca tccctgctat gagggggtcc gcgaccgggt
      361 gcttcgccag gtcttcgcga ccgtgctgga gcgcggcttt cgctttgtta ccatgctcac
      421 catggcggag cagctgcggg cagtccccac cgcacgatga tccgggttct cagcgtcttc
      481 gggacccgcc cggaggcgat caagatggcg ccggtggtgc atgccctcca gcaggcgccg
      541 aactccttcg agagcatagt ctgcgtctcg gcccagcatc gtgcgatgct ggaccaggtg
      601 ctcggtgtgt tcggactcag cgccgattac gacctggact tgatgacctc gggccaatct
      661 cccgccgaag taaccgcccg ggtgctggag cggctgccgg cgctgctccg gcaggtgcgg
      721 cccgacgtac ttctggtgca aggcgacacg atgacgacgt ttgctgccgc ctttgccgcg
      781 tatctggagc ggattccgtc ggggcatgtc gaggcgggac tgcgcaccgg cgatcggtat
      841 caaccattcc ccgaagagat gaaccgggtg atgacgaccc ggctcgcttc tattcatttt
      901 gcccccacgg aacaggcccg ctcggcgctg ctcgcggaag gcgttccggc ctctgatgtc
      961 cacctcaccg gcaatacggt gatcgacgcg ctgctgcaaa cggtgcggcc cgactacagg
     1021 ttccgttctc ccaagctcgc tgccctcgat cccggtcggc gattggttct gatcacgacc
     1081 caccggcgcg agagcttcgg cgcgccgttg cagtccacct gcgccgccat tcgtgacctg
     1141 gccgagcgct ttccggattt gcagttcgtg cttccggttc acccgaatcc ggaggttaag
     1201 cagacggtcg agcgcctgct gtgcgatctc gccgggatgt acctgattga tccggtcgat
     1261 tatctcgagt tcgtccatct gatgaatcgt tcgtacctgg tgttgactga cagcggggga
     1321 gtgcaggaag aggcgccttc gctggggaag ccggtgttgg tcttgcggga agtgaccgag
     1381 cgaccggagg gcgtgcaggc cggaaccgcg gtggtggtag gaaccaaccg ggagcggatc
     1441 gtggagatgg ccagcaagct gctgacctcg agagacgcgt accggaagac ggccaacgca
     1501 gtgaacccct acggcgacgg gcatgccagc gctcggattg ccaccgcact ggctgagcgg
     1561 ttcggatgag actcctggtg acgggaggca ccgggttcat tgggtcgcac ctggccgagg
     1621 aaggcaggcg tcggggtgcc gaggttattg cgttcggttt gaccgaccgg ccggaggaac
     1681 aggccaacgc ggagcgcctg aagaaactcg gcgcggaggt gctgccgggg agcatcaccg
     1741 atgcggagct ttgccgccag gcgatgcgcg gggtgactca cgtgttccat ctggcggtcg
     1801 cgatgcggga gggcggaaag agcgacgaat tcttcgagtc gatcaatctg gacggcaccc
     1861 ggcacctgct cgaggccgcg agtgtccagc gggtcgagcg gtttgtctac tgcagcacca
     1921 taggcatcta cgggcaccgc gctccgggca ttactcgcga ggactcgccg ctggccccgg
     1981 gaaatatcta cgagcgtacc aaggtctcgg ccgagcggct ggtgcgcgag tttgccgaga
     2041 agtgcgatct tccgagcgtg gtgctgcgtc cggccgacgt ctatggtccc cgcgaccaaa
     2101 gactcttgaa gatgttcaag ggcgtgagcc gggggcgttt ccctctcttc ggat
//
LOCUS       DASRPQ010002063         2077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4003489, whole genome shotgun sequence.
ACCESSION   DASRPQ010002063 DASRPQ010000000
VERSION     DASRPQ010002063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2077
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4003489"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(18..521)
                     /locus_tag="VFD73_23400"
     CDS             complement(18..521)
                     /locus_tag="VFD73_23400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76924.1"
                     /translation="MYTVPKHDQVHELDNVPVPDTTAPDPLLLADGATLVIAYRSVPS
                     PNQAQAGNRLSNATSLVVFRDCFAIHFGLPNDHAFATHPLADGGLRPCGAFEVESSSW
                     IRGLEARNRGHPRHDPQLFDQLRHWVWTFHDTVLECAALSYVAEKLDPEVDPVLRMRT
                     LLVPGER"
     gene            complement(590..1015)
                     /locus_tag="VFD73_23405"
     CDS             complement(590..1015)
                     /locus_tag="VFD73_23405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76925.1"
                     /translation="MRMFLRLLWIMSVALGPMPGCTKPHRDQQVPTSALVVLRPQAGE
                     VWTEGESYTIRWRSAAIARVNVGLALGGKDKGHAAFDLSAATDSLRWQVPVGFVSGFG
                     LRRSNDVLVRVENAADPTQFADSPRFTVVASQKNRSSSR"
     gene            complement(1012..>2077)
                     /locus_tag="VFD73_23410"
     CDS             complement(1012..>2077)
                     /locus_tag="VFD73_23410"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HZI76926.1"
                     /translation="LSVTAGYDQTTIGGEVLGERAADMVALVADVARNPLLPASELAR
                     LKADRLRNLSIQKSQPQPVAEERFRAILYGPEPYGRLFPTERMLGRFTLAQVREFHRA
                     NFGAKRSHLYVVGVFDASQVESAIRKAFGDWKAGPPRAPSPARSQPKRTLVLLDRPNA
                     VQSTILLGLPVPSAVHPDYIPLQVTNSLLGGAFVSRITSNIREQKGYSYSPFSAVTDL
                     YHQAHWAEQADVTTNVTGASLKEIFNEIDRLRNEAPPQPELTGIEKNLAGLFALQNSS
                     RLGIIGRLRFVDLQGLPDSYLTDYVKRVLEVTPEQVKMVARKYLRPEDMTIVVVGDKK
                     TVADQIKPYERGAEVDGASR"
BASE COUNT          379 a          678 c          649 g          371 t
ORIGIN      
        1 tggaagcagt tatccggcta acgctcgccc ggaaccagca gggtgcgcat ccgcagcacc
       61 gggtcgacct ctggatcaag cttctctgcc acgtagctca acgcggcaca ctccagcaca
      121 gtgtcgtgaa acgtccagac ccaatgccgt agttggtcaa acagctgggg atcgtgccgc
      181 gggtgaccgc ggttgcgcgc ttccaaccct cggatccagg acgagctctc cacctcgaag
      241 gcgccgcatg gtcgaagccc gccatcggcc agcgggtggg tcgcgaatgc gtggtcgttg
      301 ggcaggccga agtgaatggc aaaacaatcc cggaagacaa cgagactggt cgcgttggat
      361 aatcgattgc cagcctgggc ttgattcggc gacggcacac tgcggtaggc aatcaccaga
      421 gtcgcgccgt cggccaagag gaggggatcg ggcgcggtgg tgtccggtac cgggacgttg
      481 tccagttcgt gcacctgatc gtgtttggga acggtataca tcgatctctc ctgctgtctg
      541 ctacaatccc aggtcccggc agtcactctc aaggtactgt gcccagcggt cagcggctgg
      601 agctccggtt cttctgagaa gccacgaccg tgaaccgagg gctgtcggcg aactgggtcg
      661 ggtcagcggc attctctacc cgcaccagaa catcgttcga gcggcgcagg ccaaacccac
      721 tcacgaagcc aacggggacc tgccagcgca gactatcggt tgcggcagac agatcgaacg
      781 ccgcgtgccc tttgtccttg cctcccagcg cgagtcccac attcacccgg gcgattgccg
      841 ccgaccgcca gcggatcgtg tagctctccc cctcagtcca gacctcacct gcctgaggcc
      901 ggagaaccac cagtgcggag gtggggacct gctgatctcg atgcggcttg gtacaaccag
      961 gcatcggccc gagggcaacg ctcattatcc agagcagacg gaggaacatc ctcaccgaga
     1021 agcaccgtcc acctcagcgc cccgctcgta cggcttgatc tgatcggcca ccgtcttctt
     1081 atctcccacc accacaatcg tcatgtcttc cggccggaga tacttccgcg ccaccatctt
     1141 cacctgctcc ggcgtgacct cgagcacccg cttgacgtaa tcggtcaggt atgagtcggg
     1201 cagtccctgg agatccacga accgaagccg gccgatgata cccaggcgcg agctgttctg
     1261 cagcgcaaag agtccggcaa ggttcttttc gatcccggtc agctcgggct ggggcggtgc
     1321 ctcattcctc agccgatcga tctcgttgaa gatctccttg agcgaggcgc cggtgacatt
     1381 ggtggtgacg tcggcctgct ccgcccaatg cgcctggtga tacaggtcgg tgaccgcgct
     1441 gaacggtgaa tagctgtagc ccttctgctc ccggatgttg gacgtgatgc gcgagacgaa
     1501 ggcgccgcca agcagcgagt tggtcacctg aagcgggatg tagtccgggt gcaccgcgct
     1561 cggcaccggc agcccgagca ggatggtgga ctgcaccgcg ttgggacggt cgagcagcac
     1621 cagcgtccgc ttgggttggc tcctggcggg cgatggcgct cgtggtggcc ccgctttcca
     1681 gtcgccgaac gcctttcgga tcgcgctctc gacctgagac gcatcgaaca caccgacgac
     1741 gtagagatga gagcgcttcg ccccgaagtt ggctcggtga aactcgcgga cctgcgccag
     1801 agtgaatcgc cccagcatcc gctcggtggg aaacagccgg ccgtacggct ccgggccgta
     1861 gaggatggcg cggaaccgct cctctgccac cggctggggc tggctcttct ggatcgacag
     1921 gtttcggaga cggtcggcct tgagtcgtgc cagctccgag gcaggaagca gtggattccg
     1981 ggcgacatct gccaccagcg cgaccatgtc cgccgcgcgc tcacccagca cttccccacc
     2041 gatcgtggtc tggtcgtacc ccgccgtcac cgacaga
//
LOCUS       DASRPQ010002064         2177 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_247829, whole genome shotgun sequence.
ACCESSION   DASRPQ010002064 DASRPQ010000000
VERSION     DASRPQ010002064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_247829"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..148
                     /locus_tag="VFD73_23415"
     CDS             <1..148
                     /locus_tag="VFD73_23415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZI76927.1"
                     /translation="DVEKITSEWVHWYNTSRLMHRLGRRPPVEAEAEYYHAHRPGHQA
                     QGHT"
     gene            complement(400..579)
                     /locus_tag="VFD73_23420"
     CDS             complement(400..579)
                     /locus_tag="VFD73_23420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76928.1"
                     /translation="MATIRLDGPQIEELKNLLGAAFLPPRFTEFLLYRLNRNIWNYTG
                     ATDDYPTILLCHRGT"
     gene            complement(609..1547)
                     /locus_tag="VFD73_23425"
     CDS             complement(609..1547)
                     /locus_tag="VFD73_23425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76929.1"
                     /translation="MGITIVYVHGNGNKVREALLKQQWDEALFGRDLGASSRMAYWAS
                     VRYPQPLPDPSSVEAVFDEIEEAPTSLLEAAPPPPVEPPEEFVAQSIREVQAAEAAIT
                     LESVPESAGKDLEEWLRRMTYTADALAAGENAEPPPASSFEALPFPRPIRIAVFRELV
                     KRTFKDVYAYFFGDSKEPMRQVLRDALGGIDGPVVVLSHSLGTIIAYDVLREQGSSGL
                     EIPLFVTVGSPLGVTEVQDLVERPLQVPAAVTEWRNASDARDLVALDHTLRPAYAPAE
                     RCTDFVVVNDSSNHHGIREYLRAAPIQEPIRELFQQ"
BASE COUNT          386 a          705 c          689 g          397 t
ORIGIN      
        1 cgacgtggag aagatcacct ctgaatgggt ccactggtac aacaccagca ggctcatgca
       61 ccgtcttggc cggcggcctc ctgtggaggc cgaggccgag tactaccatg cccacaggcc
      121 gggtcaccag gcccagggac acacgtaacg aggcgtgcat gaaacccggg tcgcctcact
      181 ttctcgaaca gagaaagggc cttctgcatg tggtttgcta acggatttgc taacgaggcc
      241 actgctgtcg acgcgagcgt gccaccaatg atcagctcgg ccagggtgtt ggcgacctgg
      301 cggtctgctt ccaggtcggt ctggacgtat tgcttcatgg tgaacgccac gtccgcatgg
      361 ccgatgcgct tgctgagagc tttccagtcg atcttggcat cacgtcccgc ggtggcatag
      421 caggatggtc gggtaatcat cggttgcgcc ggtatagttc cagatgttcc gattgagacg
      481 gtacagcagg aactcggtga accttggtgg caagaacgca gccccgagga gattcttcaa
      541 ctcctcaatc tgtggtccgt cgaggcgaat agtggccatt gatccctcct ggcgggcttt
      601 ggctcggcct actgctggaa cagctcccgg atcggttctt ggatcggtgc cgcccgcagg
      661 tactcgcgaa ttccatggtg gttcgagctg tcgttgacca cgacgaagtc agtgcaccgc
      721 tcggcgggcg cgtaggccgg ccggagcgtg tggtcgagcg cgaccaggtc acgcgcgtcc
      781 gaggcattgc gccactccgt caccgccgcg ggcacctgca ggggtcgctc caccagatcc
      841 tggacctcgg tgacccccag tggcgagccg accgtcacga acagcgggat ctccaggccg
      901 ctgctgccct gctcgcggag cacgtcgtag gcgatgatgg tgccgaggct gtgactgagc
      961 acgaccacgg gcccgtcgat gccgcccagc gcgtcccgga gcacctgacg catcggctcc
     1021 ttggaatctc cgaagaaata ggcgtacacg tccttgaagg tccgcttcac gagctcgcgg
     1081 aacaccgcga tgcggatcgg gcgggggaac ggcagcgcct cgaacgacga ggcaggcggc
     1141 ggctcggcgt tctctcccgc ggccagggcg tcggcggtat aggtcatgcg ccgcaaccat
     1201 tcctcgaggt ccttcccggc tgactcagga acgctctcca gcgtgatggc cgcctcggcc
     1261 gcctgcacct cgcggatcga ctgggcgacg aactcctccg gaggctccac tgggggcggg
     1321 ggggcggcct ccaacagtga ggtcggtgcc tcttcgatct cgtcgaacac cgcctccacc
     1381 gacgacgggt ccggcaacgg ctgcgggtac cggaccgaag cccagtacgc catccgcgac
     1441 gaggcgccga gatccctgcc gaagagggcc tcgtcccact gctgcttgag gagcgcttcg
     1501 cgcaccttgt tgccgttgcc atggacgtac acgatcgtga tgcccatgct ggcctccccc
     1561 aacaccaccc acgatgtact tgtcggacaa cctcacaact tggcccggca tggcgagcgc
     1621 acttctatcg ggcgactcca ccacgcgacc cgccacaacg cagccgctcc acgatcttca
     1681 ggatcctccg cgcgccgtag cgagtcaacg gttagtaagg tgacactcaa atcagctaga
     1741 acccctgctt acgcgcaatc acggcccgac gtggaaatgt actagtgtcg cttgtcttgc
     1801 ctcggcaggc gtcaatccag cgccgcaggt gatcaccaga cggggatagc taacagagcc
     1861 tgcccggctg cgcacggcag acccggtagc cggtgtggcg aacgatgtgc gccacggcga
     1921 ggtgctcgtc aggcgggttg atggcgatac ggttttcggt cattgcgtct gggcctcctt
     1981 cgcaggctca gggcctggtc cgccacggtg ctctgtggcc atggcggacc gcttgtcaca
     2041 tggctgtcac ggacgctgcc ggacagcact ggacgcaagt gttcactctc ggacgcttgc
     2101 atgcgctggc ctgcgaaaaa gtggtatggc tggactcagc cataaacgcc gcatggcctc
     2161 tatttcacta cggatca
//
LOCUS       DASRPQ010002065         1050 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1513962, whole genome shotgun sequence.
ACCESSION   DASRPQ010002065 DASRPQ010000000
VERSION     DASRPQ010002065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1513962"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..523)
                     /locus_tag="VFD73_23430"
     CDS             complement(<1..523)
                     /locus_tag="VFD73_23430"
                     /inference="COORDINATES: protein motif:HMM:NF012870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HZI76930.1"
                     /translation="MLTFLLWLGIATSKWHSWKDRYGKANEHNAWIPRDHWLNGAEKQ
                     AIIDFQARFPLEGYRRLTFMMLDADVVACSPASVYRVLKGAGLLERHNSKTSKKGTGF
                     DQPIKPHEHWHVDVSYLNIGGTFYYLCSLLDGCSRYTVHWEIRATMTEVDVEQIVQRA
                     REKFPGVTPRIISD"
     gene            637..966
                     /locus_tag="VFD73_23435"
     CDS             637..966
                     /locus_tag="VFD73_23435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76931.1"
                     /translation="MLLHQLGEDLVLALELGLQVGDLLVLGVGGGLAALVVGGEGGGA
                     VLEELLLPVVEDVDGDTVLREARRPSAPACSGGVGVSQVFLQGNIAANSPEGKFQFQL
                     GQYTRRR"
BASE COUNT          172 a          294 c          374 g          210 t
ORIGIN      
        1 tgtccgagat gatcctgggc gtcaccccgg ggaacttctc acgggcccgc tggacgatct
       61 gctcgacgtc cacctcggtc atcgtcgcgc ggatctccca gtgaacggtg tagcggctgc
      121 acccgtccag caggctgcac aggtagtaga aggtcccacc gatgttgagg taggagacgt
      181 ccacgtgcca gtgctcgtgc ggcttgatcg gttggtcgaa gcccgtgccc ttcttggagg
      241 tcttgctgtt gtgccgctcc agcaggccgg cccccttgag gacgcggtag acgctggcgg
      301 ggctgcaggc caccacgtcg gcgtcgagca tcatgaaggt caggcggcgg tagccctcca
      361 gggggaagcg ggcctggaag tcgatgatgg cctgcttctc ggcgccgttg agccagtggt
      421 cacgcgggat ccaggcgttg tgctcgttgg ccttgccgta gcggtccttc caggagtgcc
      481 acttggaggt ggcgatgccg agccacagca ggaaggtgag cacggtaatg ccggtcttgt
      541 cggaccagcg cttgacgaag tcgacgacct ggtcgcgggt gtcatgggga acccagacgc
      601 ctttcagggt tccccaagtt ctttttttag ctggacgtgc tcctccatca gctcggagag
      661 gacctcgtgc ttgcgctgga gcttggcctc caggtgggcg atcttcttgt ccttggcgtc
      721 ggtggcgggc ttgcggcgct ggtcgtgggc ggtgaaggcg gcggtgccgt tctcgaagaa
      781 ctgcttctgc cagtggtaga agacgttgac ggcgataccg tgctgcgaga agcacggcga
      841 ccttctgctc cggcgtgtag tggcggcgtt ggcgtgtcac aggtgttcct ccaggggaat
      901 attgccgcta actcccccga aggcaaattc cagttccagc tggggcaata caccaggaga
      961 cgctagaaga ggagtcggag gcggcaccga cggggaagta gccgagaatg ccattaacgt
     1021 tgaggccggg caagcggatg gcgaggagtg
//
LOCUS       DASRPQ010002066         1264 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_248027, whole genome shotgun sequence.
ACCESSION   DASRPQ010002066 DASRPQ010000000
VERSION     DASRPQ010002066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1264
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_248027"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(230..829)
                     /locus_tag="VFD73_23440"
     CDS             complement(230..829)
                     /locus_tag="VFD73_23440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76932.1"
                     /translation="MSVDGADDDHSSIVAVYAQVGENYRQIDDLRLRLLALLPLATGT
                     GLLILLGGHSVSAAVDVPVGVFGMVATLSLYFYELHGVEKCAHYIDRGASLEDDLGVS
                     GSFTNRPHHIFGVVSELLPSALIYPASFAGWLFLALYHAGPGVRSVVTVAVLMVGAAV
                     SITMIHVMEKTRPRRRAELEQQGTLGRRVRECAETGQPS"
BASE COUNT          241 a          405 c          402 g          216 t
ORIGIN      
        1 gctcgcctgg gacaacggct ggggctactg gcagcagtcc tggacagcct ggctgaaggg
       61 cagctcggcc gggccggtca ccacaaccgc gctggcgggg gccagccccg gcatcggcgg
      121 catgcgccgg gtctaggtct cccgcggcta ggtctcccgc gcccattcat agccgctcag
      181 cctgatagcg cacaggcatg accagtgcca ggtgcctccg cggccttgcc taactcggct
      241 gaccggtttc ggcgcactcg cgtacgcgtc gcccgagggt gccctgctgc tcaagttcgg
      301 cgcgcctgcg cgggcgggtc ttctccatga catggatcat cgttatcgat acggcagcac
      361 cgaccatgag aacggcgaca gttacgacgc tgcggacacc cgggcccgca tggtagaggg
      421 ccaggaacag ccagccggcg aagctcgcag gatagatgag agcagacggc aggagctcac
      481 tgacgacacc gaatatgtgg tgggggcggt tggtgaacga gccggaaaca ccgagatcgt
      541 cctcgaggct cgcgccccgg tcgatgtagt gggcgcactt ctcgacgccg tgcagctcgt
      601 agaagtacag gctaagcgtg gcgaccatcc cgaacactcc caccggcacg tcaacggcgg
      661 cagagacgct gtggcctccc aggagtatca gaagtcccgt gccagttgcc aagggcagca
      721 gtgcaagcag ccgcagccgc aggtcatcga tctgccggta attctccccg acctgcgcat
      781 atacagccac tatggagctg tggtcatcgt cggcgccgtc aacgctcatg gcgtcctccc
      841 agctgcatga ggagcttcac tgcccgcggc cgtaaccgtt cgtactgctt atacggaggc
      901 cagcacagac agctcagata cacccagaag gtttccagcg aaatagcgat ctgttccggg
      961 cctgccaggt caacctggac cctgacggga accctggaca tcaggggcgg ctcgtgcctg
     1021 cgcctccagg acatcatcac ctggatcagc acgtgaattc tgggatcagt ctagaagggc
     1081 tggccatttc gcgccaaccg gacgccctct tctggttgat atgagtgcgg ccgcgtgtgg
     1141 cggaaattgc tgcccctcaa gggtgatagc caatccgcgg cgattagtga ccgcaataag
     1201 ccctccggga ggacgcgaac ttatgatatt tcgcgtgtca gcgtgacggg caggctgcgt
     1261 ctcc
//
LOCUS       DASRPQ010002067         1178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3411871, whole genome shotgun sequence.
ACCESSION   DASRPQ010002067 DASRPQ010000000
VERSION     DASRPQ010002067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3411871"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..733
                     /locus_tag="VFD73_23445"
     CDS             <1..733
                     /locus_tag="VFD73_23445"
                     /inference="COORDINATES: protein motif:HMM:NF012616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rRNA adenine N-6-methyltransferase family
                     protein"
                     /protein_id="HZI76933.1"
                     /translation="PRERQIISTVPAQRASRSEQLLLFGRNFLKHPKMLGSLIPSSRF
                     LVNHLLSEVDWSRARVFLEYGPGVGTFTTEILRRMRSDAVLIAVETNSDFVGFLRGRV
                     RDDRLHVVHGSAADADAALARLALSRADYVISGIPYTTMPPELRDLILRKTHAVLDPN
                     GAFLVYQFTRAVLPYLQQTFGFVHQDFEPLNVMPARLFYCRHHVDRTRSDPLVRRANG
                     SGRPRSLQPVAPDPTGRARSPLSSG"
     gene            complement(648..>1178)
                     /locus_tag="VFD73_23450"
     CDS             complement(648..>1178)
                     /locus_tag="VFD73_23450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76934.1"
                     /translation="VRGQLNDLEDYPEVTRDLKQILRKVEQHVSDLSDLSERRKAAGA
                     TDAIKKAGSAVLGMGAAAIDLVRTEGLPKNLRDDYTAFSLATIGYLMLHTTALSLQEQ
                     EVAQLARQHFADYANAVTLLHNVVPGAVVRYLREEGLPVQEGVLPEISRTIEEIWHAQ
                     SDQAPRAAETSVAQSR"
BASE COUNT          205 a          383 c          344 g          246 t
ORIGIN      
        1 ccctcgtgaa aggcagatca tctccaccgt gcctgcacag cgcgcctcgc gttccgagca
       61 gctcctgctc ttcggccgca attttctaaa gcatcccaag atgctcggca gtctcatccc
      121 gagctcgcgt tttctggtga atcacctcct gtccgaagtg gactggtctc gggctcgagt
      181 cttcctcgag tatggacccg gggtcggtac attcaccact gagatcctgc gccgaatgcg
      241 gtccgacgcg gttctcatag cggtggagac caacagtgat tttgtagggt tcttacgagg
      301 ccgggtgcgg gacgatcgac tgcatgtggt gcacgggtcg gcagcggacg cggatgcagc
      361 gttagcgagg ctggcgctga gccgcgccga ctacgtgatt tccggaatac catataccac
      421 gatgcccccg gagctgcgcg acctgatcct ccggaaaacc cacgccgtcc tcgacccgaa
      481 cggcgccttc ctagtttacc aattcacccg ggccgtgctg ccgtatctac agcagacttt
      541 cggctttgtt catcaggatt tcgagccgct caacgtgatg ccggcgcgac tgttctattg
      601 ccggcaccac gtcgaccgta ccaggtcgga tcctctcgtc cggcgggcta acggctctgg
      661 gcgaccgagg tctctgcagc ccgtggcgcc tgatccgact gggcgtgcca gatctcctct
      721 atcgtccggc tgatctccgg gagcaccccc tcctgaaccg gaagtccctc ctcccgcaga
      781 taccgcacga cagcaccggg caccacattg tgaagcagcg tgacagcgtt ggcatagtca
      841 gcaaagtgct gccgcgccag ctgggcaacc tcctgctcct gcagcgacaa ggcggtcgtg
      901 tggagcatga gatatccgat cgtggcaagg ctgaatgcgg tgtaatcgtc tcgaagattc
      961 ttgggcagcc cctccgtgcg aaccagatcg atggcggcgg cacccatgcc gagcaccgct
     1021 gatccggcct tcttgatcgc gtcagtggct ccggcggcct tccggcgttc gctgaggtcg
     1081 ctcaggtccg agacatgttg ctccactttt cgcaggatct gtttgaggtc acgggtgacc
     1141 tcaggatagt cctccagatc gttcaactga ccgcgcac
//
LOCUS       DASRPQ010002068         1930 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3411886, whole genome shotgun sequence.
ACCESSION   DASRPQ010002068 DASRPQ010000000
VERSION     DASRPQ010002068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3411886"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            333..953
                     /locus_tag="VFD73_23455"
     CDS             333..953
                     /locus_tag="VFD73_23455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76935.1"
                     /translation="MAELVPDAKSLLRDDLSKEYYAILGVVSSYDGWLLIVKGWSVTL
                     SLAALGLGFQQRHFALFALAAVTGAAFWYMDGLMKGYQYRYYVRMREIEYTAYLINRV
                     VVGGEYGQRPISAPRIDMTWPFTGFPGEPQPGNGEDAGEPAADEDDWRADEPWRRTPQ
                     EISKFLRRRFALPNVWLPHALAVVLGLVLFIAAAVLNASGLEHLHL"
     gene            1103..1294
                     /locus_tag="VFD73_23460"
     CDS             1103..1294
                     /locus_tag="VFD73_23460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76936.1"
                     /translation="MGRQAAVVLYVLAMVAVVVGADILFFRHHFWPRLIVNVGIVLVF
                     AAFYLRFLKRPRAQPPQGR"
     gene            complement(1524..>1930)
                     /locus_tag="VFD73_23465"
     CDS             complement(1524..>1930)
                     /locus_tag="VFD73_23465"
                     /inference="COORDINATES: protein motif:HMM:NF015534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Type 1 glutamine amidotransferase-like
                     domain-containing protein"
                     /protein_id="HZI76937.1"
                     /translation="WVPWVREADVLLADGGDATYLCHWMRESGLADLLPLLPGTVWVG
                     VSAGSMVMTPRIGAYFAGWPSAPDDRTLGVVDFSIFPHLGAFPANTLADAERWAAEIG
                     VPAYAIDEQTAIKVIDGSVEVVSEGQWTKFGS"
BASE COUNT          331 a          601 c          643 g          355 t
ORIGIN      
        1 ccctacctct gggaatgtcc tcatcgggcc cgcgacgcgg agcatctact cctaatcgcg
       61 gcatgagcgg taaaccagtc gaccgtggtg atcagttcgc ctacggttgc ggggactggc
      121 cgacttggcg gtaagggcca gagaccggtt gtccccgcga ggggttcaag aagcgtcagg
      181 aagtagaccc ggcctggccg ccagtccgtg cccgcaacgc ggcagaatcg gacgttgggc
      241 atgcgagctc cccgggaagt acaggcttca cgcagccggt aggcagttag ttgcgggtac
      301 ctctggcgct ggggtacggc aggatgaggt gcatggctga gctggtgccg gatgccaagt
      361 cgctgctgcg cgacgatctg tccaaggagt attacgccat cctcggtgtg gtctctagtt
      421 acgacggctg gctgctcatc gtcaagggat ggtccgttac gctgtcgctt gccgcgctgg
      481 gccttgggtt ccagcagcgg cacttcgcgt tgttcgctct tgctgcggtg actggcgctg
      541 cgttctggta tatggacggg ctcatgaagg gctaccagta ccggtactac gtccggatgc
      601 gtgagatcga gtacaccgcc tacctgatca accgcgtcgt tgtgggcggg gaatatggcc
      661 agcgaccgat ctcggcgccg cggatcgata tgacctggcc attcaccggt tttcccgggg
      721 aaccgcagcc gggtaacggc gaggatgccg gagagcctgc ggcggatgaa gatgactggc
      781 gcgccgatga accctggcgg cggacgccac aggaaatcag caagttcttg cggcgtcgtt
      841 tcgcgttgcc gaacgtctgg cttccgcatg ccctggcggt cgttctcggg ctagtgcttt
      901 tcatcgccgc agcggtgctc aatgcttccg gcttggagca cttgcatctg tgagcaagtc
      961 gttactcatc gcggcatgac cggacgtctc caccggtatc tccggttggc gcgacgtttc
     1021 tgcggaggct acgcgagaag ccgcagcgtc ctgacggttc gctgatcttg ctccgctccg
     1081 gcgagcagag tagaacgaag cagtgggaag acaggcagcc gtggtgctgt acgtgctcgc
     1141 gatggtagcc gtcgtggtcg gcgcggacat cctgttcttc aggcaccact tctggccgcg
     1201 gctgatagta aacgtcggaa tcgtcctggt attcgcggcg ttctatttgc ggttcctgaa
     1261 gcgcccgcga gcgcagccgc cgcaaggccg gtaacgacgc aggaccccag acgtggatcc
     1321 cggcctgatc cctgagccgg gtcagccggc tcaagaagac acttatccgt tggggctcag
     1381 tgctgacgcc ggcgaccgac cctgtacgcg gcagatccgt atagccgcag cgcacgcaac
     1441 ctgcgacacg ggcgagtgcg ccaggaagtg ctgcaagccg gcaaggtcac gtccaaccac
     1501 gcgacgtcag gaatgccggg cggctatgac ccgaacttcg tccattgccc ttcggagacc
     1561 acctcgacgg agccgtcgat gaccttgatg gccgtctgtt cgtcgatggc gtaggccggg
     1621 acgccgattt cggcggccca ccgctctgca tcagccagcg tgtttgccgg gaaagcgccg
     1681 aggtgcggga agatcgagaa gtcgacgact cccagggtgc ggtcgtccgg cgcggacggc
     1741 cacccggcga agtacgcgcc gatccggggc gtcatcacca tgcttccggc actcactccc
     1801 acccagaccg tgccgggcag caaaggcagc agatcggcca gcccggactc ccgcatccag
     1861 tggcacagat acgtcgcgtc gccgccatcg gccaggagca cgtcggcctc ccggacccag
     1921 gggacccatc
//
LOCUS       DASRPQ010002069         2622 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4003700, whole genome shotgun sequence.
ACCESSION   DASRPQ010002069 DASRPQ010000000
VERSION     DASRPQ010002069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2622
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4003700"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            422..2197
                     /locus_tag="VFD73_23470"
     CDS             422..2197
                     /locus_tag="VFD73_23470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZI76938.1"
                     /translation="MFLRYKVRRKDGKEHRYWSIVENRRVSGGRTVQRQVLYLGEIND
                     GQKAAWCRTIEAFDEAGQDPRQIALFPEDRPAPVLDCDVVHVRLSGLRLHRPRQWGAC
                     WLACHLWDQLRLDDFWSPRLPASRQGTRWLNVLKTLVTYRLVDPGSEWRLHRQWYAQS
                     AIGDLLGEDFAVAGKDNLYRCLDKLLAHKQELFSFLRQRWQTLFQADFEILLYDLTST
                     YFACDPPETGKRRFGHSRDHRSDCVQVVIALIVTPEGFPLTYEVMPGNTSDKTTLGDF
                     LRRIEVQYGKAGRTWVMDRGIPTEAVLTEMRAAKTPTHYLVGTPRARLSQLEQEFLAR
                     PWAQVRDSVQVKLIEQDGELYILARSGGRRNKEQAMRRRRLKKLVKRLHELRQHKLTR
                     DQLLIKLGAARTEAGPVAYRIIDIQLPGKDQPVTAETFCFKLNWQKLREARRREGSYL
                     LRSNLTGGDPAKLWAFYLQLVEIEQAFKELKGDLAIRPIYHQTDGRIEAHIFVAFLAY
                     CLQVTLKQRLRSLAPGLTPRSVLEKMAAIQMVDMHLPTTDGRTVLLSRYTEPELDQLI
                     LLRQLKIDLPAQPSPRIASVDVAAP"
     gene            2236..>2622
                     /locus_tag="VFD73_23475"
     CDS             2236..>2622
                     /locus_tag="VFD73_23475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76939.1"
                     /translation="MENLEFGGFYASSCESRVNLDRAARNTHGNVEYQSDFRVLKPLD
                     LDRGNGCLAYDVPNRGNQPIMPRLNGAPDGGHPQHAGNGFLMQRGFTVVWSGWQGDVP
                     PGNDRLTAQFPTIPGITGILREEFIAE"
BASE COUNT          500 a          786 c          879 g          457 t
ORIGIN      
        1 cgccgcgtct cggtgggtcc ggtggcggcg agcgcggcct cgatcctttc cagcatccgc
       61 ggcagcagcg cgaccgcgag ctgggtggca tggatagagg ttgcgatccc agggttgacg
      121 gtcgagattt gttgccgctg aaaaccggga ccgttggatt agtagcaatg cgcatcaaat
      181 ccaccgccga tcgtagtgcc caagaggacg gccaggaagg ctgtccgccg ctgagcgatc
      241 ggccctcaac caagccttag cccgactttc gcaactcgac cctgatttgg ggaattttgc
      301 ggatgggctg aacggcaacc ggttgatcgg cttggtgcga tctcggaaga acagtggaaa
      361 agcggcagcg gtgccgacca agtagcttgc gggacgatcg gcggctgcag aatctcgcgg
      421 catgtttttg cgctacaagg ttcgccggaa ggacggcaag gagcaccgct actggagcat
      481 cgtcgagaac cgccgggtgt cgggcgggcg gacggtgcag cggcaagtgc tgtatctggg
      541 cgagatcaat gacggccaga aagccgcgtg gtgccgaacg atcgaagcgt tcgacgaggc
      601 tggccaggac ccgaggcaga tcgcgctgtt ccccgaggac cgcccggcgc cagttctgga
      661 ttgcgatgtg gtgcatgtcc ggctcagcgg actgcggctg caccggccgc ggcagtgggg
      721 cgcctgctgg ctggcctgcc atctgtggga tcaactgcgg ctggatgact tctggtcgcc
      781 acgactgccg gcctcgcgac agggaacgcg ttggctgaac gtgctgaaga cgctggtgac
      841 ctaccggctg gtcgacccag gcagcgagtg gcggttgcat cggcagtggt acgcgcaaag
      901 cgccatcggc gacctgctgg gcgaggattt cgccgtggcc ggcaaggaca acctgtaccg
      961 gtgtctggac aagctgctgg cgcataagca ggagctgttc agcttcctgc ggcagcgctg
     1021 gcagacgctg ttccaggccg atttcgagat cctgctgtat gatctgacca gcacgtattt
     1081 cgcatgcgat ccgccagaaa ccggcaagcg gcggttcggc cactcgcggg accacagatc
     1141 agactgcgtc caggtggtca ttgccctgat cgtgacccca gagggtttcc cgctgactta
     1201 cgaggtgatg ccgggcaata cctcggacaa gacgacgctg ggcgacttcc tcaggcggat
     1261 cgaggtccaa tatggcaaag ccgggcgcac ttgggtaatg gaccgtggca tcccgacgga
     1321 agccgtgctg accgagatgc gggctgcgaa gacgccaacc cactacctgg tcggcacacc
     1381 ccgcgcgcgg ctcagccagt tggagcaaga attcctggcg aggccctggg cacaggttcg
     1441 cgattcggtt caggtgaagc tgattgaaca ggatggtgaa ctttacatcc tggctcgcag
     1501 cggcggacga cggaacaagg agcaggcgat gcggcggcgg cggctgaaga agctggtcaa
     1561 acgcctgcat gagctacgcc aacacaagct gacccgggat caactgctga tcaagctggg
     1621 agctgcacga acggaagcgg ggccggtcgc ttatcggatc atcgacatcc agctgcccgg
     1681 caaggaccag ccggtcacgg cggagacttt ctgcttcaag ctgaactggc agaagctgcg
     1741 ggaggcacgc cggcgggaag gcagttatct gctgcgatcc aatctcacgg gcggcgatcc
     1801 ggcgaaactc tgggcgttct atctgcaatt ggtggagatc gagcaggcct tcaaagaact
     1861 caagggggac ctggcgatcc gcccgatcta ccaccaaacc gacgggcgca tcgaagccca
     1921 catcttcgtg gcattcctgg cctactgtct gcaggtgacg ctcaagcagc ggctgcggtc
     1981 cctggcgccg gggctgacgc cacggtcggt gttggagaag atggccgcaa tccagatggt
     2041 cgacatgcac ctgccgacca ccgatgggcg cacggtcctg ctgtcgcgct acaccgagcc
     2101 agaactggac cagttgatcc tgctccgcca gttgaagatc gacttgcccg ctcagccgtc
     2161 acccaggatt gcctcggtcg acgttgccgc gccatgacac cgccctgtgt ggtgccgacc
     2221 tttcgaccgt acacagtgga aaacctcgag tttggcggct tctatgcctc gagttgcgaa
     2281 agtcgggtta acctcgatcg tgccgcgcgc aacacgcatg gcaatgtcga gtatcagagc
     2341 gatttccggg tcttgaagcc gctcgatctc gatcgcggca acgggtgcct cgcgtatgac
     2401 gtgcccaatc gcggcaacca gccgatcatg ccgcggctca acggggcgcc ggacggtggc
     2461 catcctcagc atgccggcaa cggctttctg atgcagcggg gcttcacggt ggtgtggagc
     2521 ggctggcagg gcgatgtacc gcccggcaac gaccgcctga cggcgcagtt tccgaccatc
     2581 cccggcatca ccggcatcct gcgggaggag ttcatcgccg ag
//
LOCUS       DASRPQ010002070         1438 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4307541, whole genome shotgun sequence.
ACCESSION   DASRPQ010002070 DASRPQ010000000
VERSION     DASRPQ010002070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1438)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1438)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1438
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4307541"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..579
                     /locus_tag="VFD73_23480"
     CDS             <1..579
                     /locus_tag="VFD73_23480"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HZI76940.1"
                     /translation="EELSPALTTTGLVWIVDPLDGTTNFLHGYPSYAVSIAAAIDGVL
                     EAGVVHHVPFNQTYHAARGNGAWLEERRLHVSRISDPEFALIGTGFPFRDFSVLEDYQ
                     RQFARVATGTSGIRRAGAASIDLADVAAGRFDGFWEQRLSAWDIAAGCLLIREAGGRI
                     TNYSGRDIGIEHTEVVAGNPAIHTWLLDILRS"
     gene            628..1272
                     /locus_tag="VFD73_23485"
     CDS             628..1272
                     /locus_tag="VFD73_23485"
                     /inference="COORDINATES: protein motif:HMM:NF016825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclodeaminase/cyclohydrolase family protein"
                     /protein_id="HZI76941.1"
                     /translation="MDDIEILGTESSVLQWSDAVAAPNATPAGGSVAALASALAASLV
                     AMVAGLTTRREKYAAVHAYAEEILTRAEALRLDLLDLARHDAIVVAEFMDALSLPQST
                     EFERTAREAARRAALLEAARVQLELLDQAAEVASLAEAMVGSGVATAIGDAATASFLA
                     AAASRSAYWSIRSNLRSINEPEETRPLIESAVVTLDRVEAAEIRVRQVLDERVG"
BASE COUNT          250 a          422 c          485 g          281 t
ORIGIN      
        1 gaagaactga gcccggcact cacgacgact ggtctagtgt ggatcgtaga tccgctggac
       61 ggcaccacca acttcttaca cggctatccc agctacgccg tatcgatcgc cgctgcgatt
      121 gatggtgtgc tggaagcggg agtcgtacac catgtgccgt tcaatcagac gtatcatgcg
      181 gcgcgcggaa acggcgcttg gctggaggaa cggcgccttc atgtttctcg gatcagcgac
      241 cctgaattcg ccctgatcgg caccgggttt cccttccgcg atttttccgt gctggaggac
      301 taccagcgcc agtttgcccg ggtcgcaacc ggcaccagcg gcatacgccg ggccggcgct
      361 gcctcgatcg atctcgcgga tgttgccgct ggccgcttcg acgggttctg ggagcaacga
      421 ctgtcggcct gggatatcgc ggcgggctgt ttgctgatcc gggaagcggg aggcagaatc
      481 accaactact ccggccgcga tattgggatc gagcataccg aggttgtggc agggaatccc
      541 gcgattcata cttggcttct cgacatcttg cgttcgtaac ggtagctctc cggagtcgat
      601 agaactggca tggtgactgg acgctgaatg gacgatatcg agattcttgg cactgagagc
      661 tcagtgctgc agtggtctga cgccgtcgcg gccccgaacg ccacgccagc aggcgggtcg
      721 gtcgcggcac tcgcctctgc gctcgcagcc tcgttggtcg ccatggtggc cggtctcacg
      781 accaggcgcg agaagtacgc cgcggtccac gcctatgccg aggaaattct gacccgggcc
      841 gaggcacttc gcctggatct cctggacctg gcccggcacg acgcgattgt cgtggccgag
      901 ttcatggatg cgctcagctt gccccagagc accgagttcg agcgaactgc ccgtgaagct
      961 gcccgtcggg ccgcactgtt ggaagccgcg agggtacagt tggagctgct ggaccaggcc
     1021 gcggaagtcg ccagcctggc agaagctatg gttggctcgg gggtggcgac tgccatcggt
     1081 gatgcggcga cggcgagttt cttggcggcg gcggcatccc ggagcgcgta ctggagcatc
     1141 cgaagcaatc tccggtcgat aaacgagcct gaggaaactc ggccgctgat tgaatcggcg
     1201 gtggttacgc tggatcgggt ggaagcagcg gaaattcggg tgcggcaggt gctggacgag
     1261 cgggtgggtt agctgtccgg cgtagaagca ggactgcgcc tgtcagccag tgagaattcg
     1321 aggcccgttc gcggtgattg ccacggtgtg ctcgaagtga gccgacaagc tcccgtcggc
     1381 tgtcaccacg gtccacttgt cgcttaaagt cttcgtgacc ggactgccca cggtgatc
//
LOCUS       DASRPQ010002071         1006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3712430, whole genome shotgun sequence.
ACCESSION   DASRPQ010002071 DASRPQ010000000
VERSION     DASRPQ010002071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3712430"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..214
                     /locus_tag="VFD73_23490"
     CDS             <1..214
                     /locus_tag="VFD73_23490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76942.1"
                     /translation="DGDARQGAFIGGLCLTLAAVMLLVLAGNLFQLVFAWIATSLSLH
                     RLLVFYPERPGAVRWTPEFGQPTEVS"
     gene            complement(249..1006)
                     /locus_tag="VFD73_23495"
                     /pseudo
     CDS             complement(249..1006)
                     /locus_tag="VFD73_23495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611328.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          177 a          304 c          308 g          217 t
ORIGIN      
        1 ggatggtgat gcacggcagg gcgccttcat cggcgggctt tgcctgacgc tggcagcggt
       61 catgctgctg gttctcgccg gcaatctgtt tcagttggtc tttgcctgga tcgcgaccag
      121 cctctcgctg caccggctgc tggtcttcta tcccgaacgg ccgggtgcgg tgagatggac
      181 ccccgagttt ggacagccga ctgaggtttc ttagctctgg ccgatcccct tggggtgagt
      241 agtgccgatc atgctgccac accgatcggt gtccgagcga gccccgctac cggcggtgat
      301 ttgtagacct catcgggcgt ccgatagccg agagcctgat ggggccgggt ggtgttgtag
      361 ccggcgatcc agcggccgac gcccaggcgg gcctcggaac cggtggcgta ggcgcgcaga
      421 tatatatcct catatttcaa gctgcgccac agccgctcca cgaaaacatt atccatgcag
      481 cgacctttgc cgtccatgct gatccggacg ccggcagcct ccagcacgcc ggtgaaggcc
      541 gtgctggtaa actgggcacc ctggtcgctg ttgaagatct ccggtcggcc gtaaagggcc
      601 aaggcttctt cgagggcctc gacgcagaag atcgcgtcca tcgtattaga cagccgccaa
      661 ctcagcactt tcctgctgtg ccagtccatg atcgccacca ggtagaaaaa tccccttggc
      721 atcgggatgt acgtgagata tcggtcgccc acacctggtt gggccgatcg atggtgaggc
      781 cgcgcagcaa gtacggatag atcttgtgct cggggttcgg cttgctggtg ttgggcttct
      841 gccagatcac ctgcagaccc atctgacgca tcagccggcg gacccgcttg cgattgacga
      901 catgacccgc ccggcgcagc caagccgtca tcttgcggga gccgtaagag gctgccccgt
      961 aaatttttat ctttccagca taaggttgcc gtacaataaa ttttct
//
LOCUS       DASRPQ010002072         1373 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3412248, whole genome shotgun sequence.
ACCESSION   DASRPQ010002072 DASRPQ010000000
VERSION     DASRPQ010002072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1373
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3412248"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..757)
                     /locus_tag="VFD73_23500"
     CDS             complement(<1..757)
                     /locus_tag="VFD73_23500"
                     /inference="COORDINATES: protein motif:HMM:NF014237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase"
                     /protein_id="HZI76943.1"
                     /translation="MTLGNAAGLGLYDGQSSPAGLETAASWLGSAGTIKYAEDFVDAT
                     DWSHISDPWQLSNWKGSPFTMVWGVPMLPCGGPSTQCETNVSDYDSVANGGANGYFET
                     LAQHLVSAGFGSSYIRLGWEFNASWMGWGVCNQDGSGLTSWASDFVPAFRNIVTSMRS
                     VSGANFKFIWNPIDSSNAACSGDTLENFYPGDNYVDVVALDAYDGIGQETSDSARWTD
                     ILNGVNAGNWTAETPAAVNGQKFQGYGLNWLAAF"
BASE COUNT          240 a          432 c          444 g          257 t
ORIGIN      
        1 cgaacgcggc gagccagttc agcccgtagc cctggaattt ctgcccgttg acggcggcgg
       61 gtgtctccgc ggtccagttc cccgcgttga ccccgttcag gatgtcggtc cagcgcgcgg
      121 agtcactggt ctcctgaccg atcccgtcat acgcgtcgag cgccaccacg tcgacgtaat
      181 tgtcgcccgg gtagaaattc tccagagtgt cgccagagca agcggcgtta ctgctatcga
      241 tcgggttcca tatgaacttg aaattcgcgc cgctgacgct gcgcatgctg gtcacgatgt
      301 tgcggaaagc gggaacgaaa tcgctcgccc agctcgtcag ccccgatccg tcctggttgc
      361 agacgcccca tcccatccag gaggcattga attcccagcc gagccggata taggaggagc
      421 cgaagcccgc ggacaccagg tgctgtgcca gggtctcgaa gtagccgtta gcaccgccgt
      481 tcgcgaccga gtcgtagtcg gatacgttcg tctcgcactg cgttgagggg ccgccgcacg
      541 gcagcatcgg gacgccccac accatcgtga acgggctgcc cttccagttc gacagctgcc
      601 acggatcact gatgtgcgac cagtccgtgg cgtccacgaa gtcctcggcg tacttgatgg
      661 tgcccgcgga accgagccag ctggcggcgg tctccaggcc ggccgggctg gactggccgt
      721 catagagccc gagtccggcg gcgttgccga gcgtcacgcc gccggcggga gtggtggggt
      781 ggggcgcgtg cgtgggccgg ggcatatgcg cttttatggg agctttggcg gtagcggtga
      841 cgatcggcgc cgggagcgca gcgtaagtgc tgttcctgcc ctggccgaga agacccgcgg
      901 aggcggaggc agtaggtgcc tgcgggctaa ggcggtcggc ggccggtgcg gcgctcgtat
      961 gggggaggta gacatagccg aaacctcccg cggccccggc tagcaccacg gccaatgccc
     1021 atcgatgcca tttagcggga cgcctgcgcg ttttagcggt gcggctgtgc tttccagacg
     1081 cagacattct caccattgtc gcgaacacct gtcccgataa aaaccaacca gagcacacaa
     1141 caacgtcgat gcctgagcat ccggtcctaa ctcgacctgc tgtaaccata tcgtgataca
     1201 ccaccacttg atgcaaaatc atgaaaaacg atctccggcg taacgcagcg tgttggtgtt
     1261 tcacggcttg atggtccccg atgtccgcaa tgcccgttta ggtgttaccc ggcggccggg
     1321 tgtgcctgcg gggccgctcg gtcggaaaac cgtttgagcc ttccttccgc gtt
//
LOCUS       DASRPQ010002073         1086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2427807, whole genome shotgun sequence.
ACCESSION   DASRPQ010002073 DASRPQ010000000
VERSION     DASRPQ010002073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2427807"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            365..562
                     /locus_tag="VFD73_23505"
     CDS             365..562
                     /locus_tag="VFD73_23505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76944.1"
                     /translation="MTIEITIPEDWTPGQALAMRALLQHAILNATPVVAFIRKDATAN
                     QLKEIYDRVEALIREAGLEAK"
     gene            complement(763..>1086)
                     /locus_tag="VFD73_23510"
     CDS             complement(763..>1086)
                     /locus_tag="VFD73_23510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76945.1"
                     /translation="SSLGEPCRPPRHIAKDVLGAVVTLAIIGAFVLQVTDGLASRCRA
                     GPNPRAGPAACSGPAAFAHHVQGAVTMGVAACAALAAMAFIWYMFWGYKANGQASGTR
                     KAVSR"
BASE COUNT          223 a          348 c          338 g          177 t
ORIGIN      
        1 cattcgcacg atctgcgcca actggggata tgtccggcct gaagcggaag gtcgttcgac
       61 agcgccgtcc cgccgagaac gtggcctacg cattacggac ccgtgtcccc gacatgtccc
      121 cgaaccgcca tcaattgcca accatcgcca ccatcagcta cctgagaaca tgaagctagc
      181 cccggttttg ggcccgcgag caacgcacgg tgacaccctg gtaatgcgta gatcgcgggg
      241 tacgttgcat gcccggtggg caacgggaga gtcttgacag cggtctttgc tgcgcaagat
      301 ccttacacct gccgggagat gccagattcg cggtccgata ccgatacccg ccacaggaac
      361 gatgatgacg atcgagatca ccatcccgga ggattggaca ccgggacaag cgctggctat
      421 gcgggcgctg ctccagcacg caatactcaa cgccacgccg gttgttgcct tcatccggaa
      481 agacgccaca gctaaccagc tcaaagagat ctatgatcgc gtcgaggcgc tgatccggga
      541 ggccggacta gaggcaaagt agcaggggcg cccgaggcag cccatgcatg tggggatatg
      601 tgcgggacaa tccaacgccc ggggcttctg ggttgcatca tccgcccagg tcaagacgct
      661 ggcgttagtc gaactgtaac ggtctgtaaa accgccggtt cagggccagc tcaggtacgg
      721 gtcgatcact ggtggccgcg agccgggtcg cagaggtgcg gcttagcggc tcacagcctt
      781 cctggtaccg ctggcttggc cgtttgcctt gtaaccccag aacatgtacc agatgaaggc
      841 catcgcagcc agcgcagcac aagcagcgac gcccatggtt accgccccct ggacatgatg
      901 ggcaaaggcc gccgggccag agcaggcagc cgggccagcc cgcgggttgg gccctgcccg
      961 gcaccggctg gcaagaccgt ccgtcacctg caaaacgaac gcgccgatga tcgcgagcgt
     1021 caccacagcg cctaggacgt ccttggctat gtgccgcggt ggcctgcagg gctcgcccaa
     1081 gctgct
//
LOCUS       DASRPQ010002074         1354 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2147788, whole genome shotgun sequence.
ACCESSION   DASRPQ010002074 DASRPQ010000000
VERSION     DASRPQ010002074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1354
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2147788"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(517..>1354)
                     /locus_tag="VFD73_23515"
     CDS             complement(517..>1354)
                     /locus_tag="VFD73_23515"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI76946.1"
                     /translation="AEPAAITIGEMNLGPLPMGNGLTRLQTRYLGNDANLAEVEKRTG
                     DALEAHDAEQLGLVTFTPNDVNWGEEIRIVIEERDSFSPDALAGLDANYRFAGPETIE
                     TKIFGRLSAWQNWIFNSAHASGLESMYLREITKRVQQYEKRASLIDDSHSNAKNSPVS
                     GAIEYMKGHLGEPISVAVLAEVACMSESAFAHLFKHCTGTSPYQFLKQLRLEHARGLL
                     LENHTVSEAASRVGYSSLSHFISEFKRYFGETPRSYLQRLQGIDMFNPHGSEWAAGRG
                     SL"
BASE COUNT          225 a          417 c          429 g          283 t
ORIGIN      
        1 gcagccccct ggaggcgtag tccacgacga tatcgtccaa gatgctgccg cccccgttat
       61 agaaggcgca gacgtggtcg ccgacctgga agtcgaggtc ggcgatgtcc ggcgctcgcg
      121 agctcatagt tctcctctca agaccctcac atggctcgga ccggggagtg cccgggcctg
      181 gccctccccg ccgggtggct agccgaccgg atcagccctc gtcgcgaggg gtagcggccg
      241 gctcggccgc cgtgcacgta cttggcgtgc aggtgcagtg aagtcttctc ttggtggggg
      301 cgcggcgcta ccggattcct gctgggattg tgtccattgc tgcatggttg ggtttggttg
      361 cctgtccgcg gccggccgca ggctgctgtg gcgcgtagtc agcagcctgg tcccacgtac
      421 cacgagagcc cgggtgagcg gccacacgcg cggatcactg agccgggaac tgagatgggg
      481 acagtggtgg tcgtcttcgg ccatcactgc ggcacatcac agactgcctc ttccggccgc
      541 ccactcgctc ccgtgggggt tgaacatatc aatcccttga agtctctgca ggtacgaacg
      601 cggcgtctcc ccgaagtacc tcttgaactc actgatgaag tgggagaggc tgctatatcc
      661 cacacgactg gctgcctcgc tgacggtgtg attctctagg agcaggccgc gtgcatgttc
      721 aaggcgcagt tgctttagga attgataggg tgatgtgcca gtgcaatgct tgaagagatg
      781 agcgaacgct gactcactca tacacgccac ttcagccaac acggcaaccg aaataggctc
      841 gcctaggtga cctttcatat actcgatcgc gccagaaacc gggctgttct tggcgttcga
      901 atgcgaatca tcaattaggc tggcgcgttt ctcgtattgc tgcacccgct tggtgatctc
      961 ccgcaggtac atcgactcca gcccggaggc gtgcgcgctg ttgaagatcc agttctgcca
     1021 ggcgctcagc cgaccgaaga tcttggtctc tatagtctcg gggccggcga agcggtagtt
     1081 cgcatcgagg ccggcgaggg cgtcgggact gaagctgtcc cgctcttcga tgacgatacg
     1141 tatctcttcg ccccagttga cgtcgttcgg ggtgaacgtg accaggccca actgttcggc
     1201 gtcatgggct tccagcgcat cccctgtccg tttctccacc tcggccaggt tagcgtcatt
     1261 accgaggtag cgcgtctgca gccgggtcag gccgttgccc atcggcagcg ggcccaggtt
     1321 catctcgccg atcgtgatgg ccgcgggctc cgcg
//
LOCUS       DASRPQ010002075         3650 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1835455, whole genome shotgun sequence.
ACCESSION   DASRPQ010002075 DASRPQ010000000
VERSION     DASRPQ010002075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3650
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1835455"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..512)
                     /locus_tag="VFD73_23520"
     CDS             complement(<1..512)
                     /locus_tag="VFD73_23520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase dimerization
                     domain-containing protein"
                     /protein_id="HZI76947.1"
                     /translation="MTTVSPSNQDLIRPDKDRFLAEENPFEAMMSRFDYAAQRLSLDP
                     GLYKVLRSPEKQVIVSVPILRDNGDVDVFTGYRVLYNTSRGPAKGGIRFDLNVTLDEV
                     KALAAWMTWKCAVVNIPFGGSKGGVVCDPSSLSNTELERVTRRYTSAIIEMLGPDSDV
                     PAPDMNTNERV"
     gene            complement(541..1581)
                     /locus_tag="VFD73_23525"
     CDS             complement(541..1581)
                     /locus_tag="VFD73_23525"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: protein motif:HMM:NF014645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HZI76948.1"
                     /translation="MARRGDSHRVVRWLWTSRRPDARLVRLALLPAAALWRGAMGARE
                     TAYRKGWLTVHDLPLPSVAIGNLTVGGSGKTPMATWTAQYYVSRGLVPGILLRGYGGD
                     EVLVHQHAVPEAQVVADPDRVAGAERALARGAQVLVLDDAYQRLDIHRDLNIAVVSAE
                     TTRAVGWPLPAGPWREGLRALGRAHAVVVTRKRATREAAAKLAGELRHRVAGPVAVAH
                     LGLQYVEGMLSGRKHPASALAGKRVVAASGIADPDAFVAQTKATGAAVQVATWKDHHD
                     YRDEDVAWLAHAARRADHVVITQKDAVKLRNRWPTTIPEPLVAVLDLQWEEGGDSIAA
                     ALDAVVTPVERL"
     gene            complement(1551..2201)
                     /locus_tag="VFD73_23530"
     CDS             complement(1551..2201)
                     /locus_tag="VFD73_23530"
                     /inference="COORDINATES: protein motif:HMM:NF015961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HZI76949.1"
                     /translation="MKPPPGLVRWLAGPLLKSLARSWRIQLVNEERWRSLYDRREQHV
                     FLLWHEALLPLLWQHRNQGIAMVVSEAREGRYLSSFAASLGYRSIPGSSTRGGTRALL
                     GAVRELQAGRAVAFTPDGPRGPRRQLKPGVIAAAQRGRAFVVPLHAEAGRQWRLHSWD
                     RFMIPQPRARVWISYGEPFTVLPGDAGFEAGVERAVAELGRLSSQGEWQDAAIAIG"
     gene            complement(2198..3328)
                     /gene="lpxB"
                     /locus_tag="VFD73_23535"
     CDS             complement(2198..3328)
                     /gene="lpxB"
                     /locus_tag="VFD73_23535"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: protein motif:HMM:TIGR00215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HZI76950.1"
                     /translation="MARRGTPRIFISAAEPSGDLHGAGLVQALLQRFPGASIEALGGP
                     EMRRAGATIRYPMEGLAAFGVVEVVTKVRAHYQLLRSLQKDLKVGRYDVLILIDYPGF
                     HLRLAEAAHRAGTKVLYYIAPQLWAWRPERARRLAAAVDRLAVVLPFEREFFEGLGLR
                     SDYVGHPLVDRDLHIPREQARAQLGVPPGSRLLGIFPGSRTQEIRRLWRPFSDAAQLL
                     LKDGSCDRVMVAGTRDGSYPNPGPLEIVRDEPVTLLAAADAALVKSGTTTLEAALAGT
                     PMVVAYKVHQVSWAVFQRVRTVRWVSLVNLVAGREVVPEVLQQQASAEELANQLRPLL
                     DPANPRTVAQREGLAFVRNRLGLPGASTRVAEILAELLEDSR"
     gene            complement(3328..>3650)
                     /locus_tag="VFD73_23540"
     CDS             complement(3328..>3650)
                     /locus_tag="VFD73_23540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76951.1"
                     /translation="ERIRRLRLFQPNGYFSLDLASGGGEFMRVRQGWQPGTGRELADV
                     VERIALEAPHADALALELQSFVHAVRGEREVVVRGEEGRAALALALRVADAVRTQPLA
                     VTTH"
BASE COUNT          660 a         1253 c         1141 g          596 t
ORIGIN      
        1 acccgctcgt tggtgttcat gtccggcgca ggcacgtcag agtcgggccc tagcatctcg
       61 atgatggcag aggtgtagcg ccgagtcacc cgctcgagct cagtgttgga cagggagctg
      121 gggtcgcaga ccacaccgcc cttcgaccca ccgaagggga tattcacgac cgcgcacttc
      181 catgtcatcc aggcggccag cgccttcact tcgtccaagg tgacattgag atcgaagcgg
      241 atgccgcctt tggccggccc ccgggacgtg ttgtagagca cccggtagcc ggtaaacacg
      301 tccacatctc cattgtcgcg aagaatgggc accgagacga tgacctgctt ttcggggctg
      361 cgaagcacct tgtagagccc tggatccaag ctgagtcgct gcgcggcata gtcgaagcgc
      421 gacatcatcg cctcgaaggg gttttcctcg gccagaaacc tgtctttatc gggtcggatc
      481 aggtcttgat tggaagggct gacggtagtc atagatggtc tcggtacact cctcgaggtg
      541 tcacagacgt tccacggggg tcacgacggc gtccagcgca gcggcgatac tatcgccacc
      601 ctcctcccat tgcagatcga gcacggcaac gagaggctca gggatggtgg tgggccagcg
      661 attccggagc ttcacggcat ccttttgggt gatcaccaca tggtcggcgc ggcgcgccgc
      721 atgcgccagc caggccacgt cctcgtcgcg gtaatcgtga tgatctttcc aggtggccac
      781 ctgtaccgct gctcccgtcg ccttggtctg agcgacgaat gcgtcggggt cagcgatgcc
      841 cgacgcagcg acgactctct tgccggccaa cgctgaagcg ggatgctttc tgccgcttag
      901 catgccttcc acatactgca gtccgaggtg cgctaccgct accggtccgg cgaccctgtg
      961 tctgagctcg cccgccaatt ttgctgccgc ctcgcgagtc gcccgcttac gggtaactac
     1021 gaccgcgtgc gcccgcccca gggcacgcag tccctctcgc caggggcccg ccgggagcgg
     1081 ccagcccacc gcacgggtgg tctcggcgct caccacggcg atgttgagat cgcgatgaat
     1141 atccagccgc tgataggcgt cgtcgagcac gagaacctgc gccccgcggg ccagggcccg
     1201 ttctgctccg gcaacacggt cgggatcggc caccacttgg gcctcgggaa cggcatgctg
     1261 atgaaccagc acttcgtcac cgccgtagcc ccgaagcaga attcccggaa cgagaccgcg
     1321 ggagacgtaa tactgtgcgg tccaggtggc catcggcgtc tttcccgacc cgccgacggt
     1381 aagattgccg atggccacgg acggaagcgg gaggtcgtgg accgtcagcc agccctttcg
     1441 ataggccgtc tctcgagcac ccatggcgcc gcgccagagc gccgcagccg gaagcaaggc
     1501 gaggcgcacc agccgggcgt cgggcctgcg gctggtccag agccagcgca ctacccgatg
     1561 gctatcgccg cgtcttgcca ttcgccctga ctcgataggc gtccaagttc cgcgacggcg
     1621 cgctcgaccc cggcctcgaa tccggcgtct cccggcagca ccgtaaatgg ctcaccatag
     1681 ctgatccaga cgcgtgccct cggctgggga atcatgaatc gatcccatga atgtaatcgc
     1741 cactgccgac ccgcctccgc gtgcagtggc acgacgaacg cccggccccg ctgggccgct
     1801 gcgatcacgc caggcttgag ctggcgccgc ggtccacgag gaccatccgg agtaaatgcc
     1861 acggcgcggc cagcctggag ctcgcggacc gccccgagga gcgcccgagt cccgccgcgg
     1921 gtgctggacc cgggaatgga gcgatagccg agcgaggccg caaaactcga gaggtaacga
     1981 ccttcgcgtg cctcgcttac taccatggca atgccctggt tgcgatgttg ccagaggagc
     2041 ggaagtaacg cctcgtgcca gagcaaaaag acatgctgct ctcgcctgtc gtacagcgat
     2101 cgccaccgct cctcgttgac cagctgaatg cgccacgagc gtgccagact cttcagcagg
     2161 ggacccgcca accaacgcac cagcccaggc ggcggcttca ccgtgaatcc tcgagcagct
     2221 ccgccaggat ctccgcgacc cgggtcgatg ctcccggcag gcccaggcga ttccgaacga
     2281 aggcaagacc ctcacgctgg gcgacggtgc gcgggttggc ggggtccagc aacggtctga
     2341 gctgattggc cagctcctcc gccgacgcct gctgctgcag cacctccggc acgacttccc
     2401 gtccagccac cagatttacc aggctgaccc agcgtaccgt tcgaactcgc tggaagacag
     2461 cccagctcac ctgatgaacc ttataggcaa ccaccatcgg ggttccggcg agcgcggcct
     2521 cgagggtggt ggttcccgac ttcaccagag cggcgtctgc cgctgccagc aacgtcactg
     2581 gctcgtcccg cacgatttcg agcggacctg gattgggata actcccatct ctggtccccg
     2641 cgaccatcac tcggtcgcag cttccatcct tgagaaggag ctgtgccgcg tcgctgaacg
     2701 gacgccagag ccgtcggatc tcctgagtcc gacttccagg aaagatgccg agtaagcggc
     2761 tgcctggcgg aactccaagc tgagctcgag cctgctcccg cgggatgtgg aggtctcgat
     2821 cgaccagcgg gtgaccgacg taatcactcc tgagccccag tccctcgaag aactcgcgct
     2881 caaacggcaa caccacggct aatcggtcga ctgccgcagc cagacggcgg gcccgttccg
     2941 ggcgccaggc ccagagctgt ggagcgatgt agtagagcac cttggtgccg gcgcggtggg
     3001 ccgcctccgc caggcggaga tgaaagcctg gatagtcgat caggatcagg acatcgtacc
     3061 gcccaacctt gagatccttc tgcagtgatc gaagcagctg ataatgggcc cgcaccttgg
     3121 tcacgacctc gaccactccg aaggcggcaa gcccctccat tggataacga atggtggcgc
     3181 cggcgcgccg catctccggc ccaccgaggg cctcgatgct ggcccccggg aagcgctgca
     3241 gcagagcctg gaccaggccc gccccgtgca gatcgccgga aggctcggcc gcagagatga
     3301 agatgcgagg agtgccccgc cgggccatta gtgggtagtg acggcgagcg gctgggtccg
     3361 gacggcatcg gcgactcgaa gagcaagggc caacgctgcc cggccttctt ctcccctgac
     3421 caccacctcg cgctccccgc gaaccgcatg gacgaagctt tgcaactcga gcgcgagcgc
     3481 atcagcatga ggggcttcca gcgcaatccg ctcgacgacg tcggccagct ctcgccccgt
     3541 gcccggctgc cacccctgtc gcactcgcat gaactcgccg cctccgctgg ccaggtcgag
     3601 cgagaagtat ccgttcggct gaaagagccg gagccggcgg atccgctctc
//
LOCUS       DASRPQ010002076         2224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1514967, whole genome shotgun sequence.
ACCESSION   DASRPQ010002076 DASRPQ010000000
VERSION     DASRPQ010002076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2224
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1514967"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1246)
                     /locus_tag="VFD73_23545"
     CDS             complement(<1..1246)
                     /locus_tag="VFD73_23545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76952.1"
                     /translation="MTPTLRERLARSSVAGRYDMFIAFGAGFAILGIILFVRALLANP
                     ESADRAWQVFHVNWIYFTSLATGGVAFAAVQKVTNAKWSGMIIRFAEALVAFLPVSLI
                     GLVLIFTVGYQSIYGPMVGAFPELQHAKVIWLSHDFMFARLGLGLLALTVLGWKLVWA
                     DMTPDMHLVQRAAGDERRLRYERWSRGYDLSSATVIANEERIHRLAPGYVVLYAYVLT
                     LVAFDCIMALQPHWFSNLLGGFIFMGAFLGAHMLLALLMMYGSRQLGVRDLVSPKQRH
                     DLGKLCFGFTVFWTYLMWAQFLVIWYGNLPEETGFVFARLWGRWLPIGVAVGWGMFII
                     PFFGLLGVRPKKTRVTLGFFASISLVSLWLERYLLVMPSVSTYPGPALGLAEAGPTLT
                     FLGLFLLTYALFARTFPMISPRL"
     gene            complement(1243..1914)
                     /locus_tag="VFD73_23550"
     CDS             complement(1243..1914)
                     /locus_tag="VFD73_23550"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HZI76953.1"
                     /translation="MRRRNAAVALLALFSGACDAYYYRIPSPDDLWNVIPWFDQMIHA
                     RYIRPYETSKVPRYTPVGTVPVSGGEPDWSAEWVTGKTTTANSLKNPFASGGRPSNPG
                     PDASVIPRDINAAGDTLYQNFCSPCHGPTGNADGTVSSQIGAPSLLTARARAYTDGYI
                     YSIIRYGRGVMPRYGDKVYAPVERWAIVNHVRKLQGQSAAPPGPATPVPPGPSATGST
                     GEVPR"
     gene            complement(1901..>2224)
                     /locus_tag="VFD73_23555"
     CDS             complement(1901..>2224)
                     /locus_tag="VFD73_23555"
                     /inference="COORDINATES: protein motif:HMM:NF023249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol:electron acceptor oxidoreductase subunit
                     ActD"
                     /protein_id="HZI76954.1"
                     /translation="LTGCAAGFGMTIWMSYDWPVVVGGKPIASIPPYVVIAFELTILM
                     GALVTVAAVAFFSVVMGKRGVAYDPRFSDDQVGIFVPADSDQIASVETLLRNAGAVEV
                     RHEAT"
BASE COUNT          492 a          702 c          693 g          337 t
ORIGIN      
        1 ccagcctggg cgagatcatg gggaaggtgc gggcaaatag cgcgtaggtc aggagaaata
       61 ggccgaggaa ggtaagcgtc ggtccggcct cagccaggcc gagcgccggg cccggatacg
      121 tgctgacgga aggcatcacc agcagatacc gctccagcca gagtgagacc aggctgatgc
      181 tggcgaagaa acccagcgtc acccgcgtct tcttgggccg gacaccgagc aagccgaaga
      241 atggaatgat gaacatgccc catcccaccg ccactccgat cggcaaccaa cgcccccaga
      301 gccgggcaaa gacaaaaccc gtttcctccg gaagattgcc gtaccagatg acgaggaact
      361 gggcccacat cagataggtc cagaagacgg taaagccgaa gcacagcttt cccaagtcgt
      421 gtcgctgctt gggagagacg agatcccgaa ccccgagttg ccgcgaccca tacatcatga
      481 gcagcgccag gagcatgtgc gctcccagga acgcgcccat gaaaatgaag ccgcccagca
      541 gattggagaa ccagtggggc tgcagagcca tgatgcagtc gaaggcaacc aacgtgagca
      601 cgtaggcgta gagcaccacg taaccgggag ccagccgatg gattcgctct tcgtttgcga
      661 tcacagtcgc ggacgacagg tcataccccc gtgaccagcg ctcatagcgc agccgccgct
      721 catcaccggc ggcacgttgc accaggtgca tgtcgggggt catatcggcc cacaccagct
      781 tccatcccag aacagtgagg gcgagcaacc cgagacctag ccgagcaaac atgaagtcat
      841 gcgagagcca gatcaccttg gcatgctgca gctcgggaaa ggcgcccacc atgggcccat
      901 agatggactg gtatcccacg gtgaagatca gcaccaggcc aatcagcgat accgggagga
      961 aagccactag ggcttccgcg aatcggatga tcatgccgga ccatttggca ttggtcactt
     1021 tctgcaccgc cgcgaaggca acgccgccgg tcgccagact ggtgaagtag atccaattca
     1081 cgtggaacac ttgccaggcc cggtccgccg attccggatt cgccagcaag gctcgaacaa
     1141 agagaatgat gccgagaatg gcgaagccgg caccgaacgc gatgaacatg tcgtagcgtc
     1201 cggccaccga gcttcgggcc agccgctccc gcagcgtggg ggtcatcgtg ggacctcgcc
     1261 ggtggaaccg gtggcactcg gccctggcgg gaccggtgtg gccggccccg gcggtgcggc
     1321 ggattgtccc tgaagcttac ggacgtgatt cacgatggcc caacgctcga ccggagcata
     1381 gaccttgtcg ccatagcgtg gcatgacccc gcggccatag cggatgatgc tgtagatgta
     1441 gccatcggtg tacgctcggg cccgcgcggt cagcaatgac ggagcgccga tctgactcga
     1501 cacggtacca tcggcattcc cggtcggacc gtggcaggga ctgcagaagt tctggtacag
     1561 tgtatccccc gcagcgttga tgtcgcgcgg aatgaccgac gcgtccggcc ccggattgct
     1621 gggccggcca ccggatgcaa acgggttctt cagtgaattg gccgtggtag tcttgccggt
     1681 gacccactcg gcagaccagt cgggctctcc cccgctgacc ggaacggtgc ccaccggggt
     1741 atagcgcggg accttcgacg tctcgtacgg ccggatgtag cgggcatgga tcatctggtc
     1801 gaaccagggg atcacattcc acagatcatc cggtgagggg atgcggtagt aatacgcatc
     1861 gcatgcgcca gagaacagcg cgagcagggc cactgccgcg ttacgtcgcc tcatgccgta
     1921 cctccaccgc accggcattt cggagcaacg tctccaccga ggcgatctgg tccgagtcgg
     1981 ccggcacgaa gatgccgacc tgatcgtcac tgaaccgcgg atcgtaggcc acgccgcgct
     2041 tccccatcac cacggagaag aaggctaccg ccgccacggt caccagcgcg cccatgagaa
     2101 tggtgagctc gaaggcaatg acgacatacg gcggaatcga agctatcggc tttccgccga
     2161 ccacgaccgg ccagtcgtat gacatccaga tcgtcatgcc gaacccggcg gcgcacccgg
     2221 tcag
//
LOCUS       DASRPQ010002077         1264 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_867666, whole genome shotgun sequence.
ACCESSION   DASRPQ010002077 DASRPQ010000000
VERSION     DASRPQ010002077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1264
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_867666"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..677
                     /locus_tag="VFD73_23560"
     CDS             <1..677
                     /locus_tag="VFD73_23560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76955.1"
                     /translation="FRRLSLGRDQFEIASPRPLSSYGDLVAFLNELNAEWVIAARRLS
                     PRMLMDLMEWAEPQLHRYLESLDPEETARFGVAWAGEEHSPNWFDIGREYTERWLHQQ
                     QIREAVGAPGLSSRRWLFPVLDIFVRALPFRYRNVPADPEATVQLEITGEAGGSWTLV
                     RTVAGWNLLAGSVSHPTARVTLDQDTAWKLFSKGLSSDQARRDIRFEGDAGLGQPVLG
                     ALAVMA"
     gene            880..>1264
                     /locus_tag="VFD73_23565"
     CDS             880..>1264
                     /locus_tag="VFD73_23565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HZI76956.1"
                     /translation="MTVAIDINPAVASTKAFLTEARARNGQLVKRKTWRPASELAVDL
                     GTANTLVFVKGEGVVLNEPSVAAIDQSTGNILGIGLEAKRMLGRTPEGVLAVRPMKDG
                     VIADFHIAEKMLRHFLRMVIDRTILR"
BASE COUNT          232 a          395 c          392 g          245 t
ORIGIN      
        1 gtttccgccg gctctcgctg gggcgcgatc aattcgagat cgcttcccct cgacccctca
       61 gcagttacgg cgatctcgtc gcctttctca atgagctgaa tgcggagtgg gtcatcgctg
      121 cgcgacgact gagtcctcga atgctgatgg acctcatgga gtgggccgag ccacagctcc
      181 atcgctacct ggaatcactc gatccagagg agacagcgag gttcggggtg gcctgggcgg
      241 gcgaggagca ttctcccaac tggttcgaca tcggccggga gtacactgaa cgctggctgc
      301 accagcagca aatacgcgaa gcggtcgggg ctccgggcct gagctcccgt cggtggctct
      361 tcccggtgct ggacatcttt gtccgggcgc tgccgttccg gtatcggaac gtcccggcgg
      421 atcctgaggc caccgttcag ctcgagatca cgggagaggc aggaggaagc tggaccctgg
      481 tgcgcaccgt ggctggctgg aacctccttg ccggcagcgt ctcgcatcca acggcccggg
      541 tcaccctcga tcaggacacg gcgtggaagc tgttctccaa aggtctttct tctgatcagg
      601 ccaggcggga catccggttc gaaggcgacg ccggtctggg acaacctgtc ctgggagcct
      661 tggccgtcat ggcctgattg tggatcatat cttgcacgct cccctgcccg agcgatgcag
      721 catctcgccg gatgtgctgt ctctctctct gacaaccaca atctgaccta cgaaccgccg
      781 gtttgcctcc ccttgggctc tcccggtgaa acgcaaccgt cacggacata tgcaaggctg
      841 tccgacgtcc gggaactcca gcagaaggga tccactactg tgaccgtagc gatcgacatc
      901 aatccggcag tagcctcgac caaggccttc ctgaccgagg ccagggcgcg caatggacag
      961 ctggtcaagc ggaagacctg gcgtcccgca agcgaactgg cagttgacct gggtaccgcc
     1021 aacacgctgg tcttcgtcaa aggcgaaggt gtcgtcctga atgagccctc ggttgccgcc
     1081 atcgaccaat cgaccggcaa catcctgggt attggtctgg aggccaagcg catgctgggc
     1141 cggacgccgg aaggagtcct ggcggttcgt cccatgaagg atggggtcat cgcggacttt
     1201 catatcgccg aaaagatgtt gcgccacttc ctccgaatgg tgatcgatcg gacgatcctc
     1261 cggg
//
LOCUS       DASRPQ010002078         1085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_249293, whole genome shotgun sequence.
ACCESSION   DASRPQ010002078 DASRPQ010000000
VERSION     DASRPQ010002078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_249293"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(442..795)
                     /gene="queD"
                     /locus_tag="VFD73_23570"
     CDS             complement(442..795)
                     /gene="queD"
                     /locus_tag="VFD73_23570"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HZI76957.1"
                     /translation="MEIFKEFTFEAAHRLPNVPAGHKCARLHGHSYRVEIHVTGEVGE
                     RSGWIMDFQDIKNAFAPLHDQLDHRYLNEVEGLDNPTSEVLARWIWERLADSLPLSQV
                     LVRETCTSGCVYRGK"
     gene            complement(795..>1085)
                     /locus_tag="VFD73_23575"
     CDS             complement(795..>1085)
                     /locus_tag="VFD73_23575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase"
                     /protein_id="HZI76958.1"
                     /translation="VETNGTQKAPRGLDWICVSPKAGAPLQLTSGDELKLVYPQQGAT
                     PEMFEGFDFPRLTLQPMDGPERDKNTRLAVEYCMAHPRWRLSLQTHKYLGIA"
BASE COUNT          190 a          336 c          335 g          224 t
ORIGIN      
        1 tccgacttgg caagttcgcg gaaggtgcgc ggttgtcccg gttcgggtcc ttcccacgat
       61 gcgatggcct cccaccaagc cgccgcccct atccggccgt cggggaccga gtctgcgtga
      121 cctggcgaga gggttgctgc atacggccgt acagatgccg cggccggtat gagcccgtac
      181 ccagcagagc aggtccagag gtgagcccgt gtgttaacgg caaggcctgg caaggcctta
      241 gcccttgtcc agtgctcgcc agcgtagagt tcgctcgccg gaagtgcggg cgtggtcacc
      301 tctgcggcta gtcgctcgac ccagttgcta gctcgctccc atggctcgcc atcgggaata
      361 tcacgcagac ggagtcgctc cgggaccttc gcagttttcc gctcagtgca cgtgacaata
      421 atgtgcagtt tctggcggct actactttcc acggtaaacg catcccgagg tgcaggtttc
      481 ccggacaagg acctggctga gtggcaagga atccgccaga cgctcccaga tccagcgagc
      541 aagcacctcg ctggtggggt tgtccaagcc ctcgacctca ttgaggtaac ggtggtcgag
      601 ttggtcgtgg aggggagcga aggcgttctt gatgtcctgg aagtccatga tccagccgct
      661 gcgctcccca acttcccctg tcacgtggat ctctacacgg taggaatgcc catgcaggcg
      721 agcgcacttg tgacctgctg gcacgttggg gagtcggtgg gccgcctcga aagtaaactc
      781 cttaaagatc tccatcacgc aatccccagg tacttatgcg tttgaaggct cagccgccag
      841 cgggggtgag ccatgcagta ctccactgcc aaacgagtgt tcttgtcccg ctcaggcccg
      901 tccattggct gcagcgtcaa ccggggaaag tcgaagccct caaacatctc tggcgtcgcg
      961 ccctgctgtg gatagacaag tttgagttca tcgccgcttg ttagctgcag tggtgccccg
     1021 gccttgggac tgacgcagat ccagtccagg cctcggggcg ccttctgggt gccgttggtc
     1081 tccac
//
LOCUS       DASRPQ010002079         2187 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3713396, whole genome shotgun sequence.
ACCESSION   DASRPQ010002079 DASRPQ010000000
VERSION     DASRPQ010002079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2187
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3713396"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..685)
                     /locus_tag="VFD73_23580"
     CDS             complement(<1..685)
                     /locus_tag="VFD73_23580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76959.1"
                     /translation="MSVVQNQGNRTGFPSSGDSVDKQWHISDVLLPVSLVMWAVGVAR
                     TDTKVLGPYGLLSVLPFVFYAAIALLIVSVTIELTRQRLSRWRMTAHTTALVVMLYGT
                     APIVYSQGRYSWLYKTIGVVQYMGAHGRINQQIDIYQNWPGFFAFAAWFDKVAGVTSP
                     LAYAKWAQLVVELAVLPLLYLIYEALSLPARQRWAALLLYSAANWVGQDYFSPQSLGT
                     ILSLGSMAIV"
     gene            complement(689..1072)
                     /locus_tag="VFD73_23585"
     CDS             complement(689..1072)
                     /locus_tag="VFD73_23585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76960.1"
                     /translation="MASRSAEIRQPATRQADMLDVTAIVLSVLLVALVFVGWSGPLRV
                     LLTVAFAFFVPGRAIVGNWPRMGQWSEAATSMVLSLAVLVLLTTVMLWVHAWHPLGLF
                     QVVAGLSLVGLIIGLARRRRRTRGA"
     gene            complement(1065..1820)
                     /locus_tag="VFD73_23590"
     CDS             complement(1065..1820)
                     /locus_tag="VFD73_23590"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZI76961.1"
                     /translation="MNSLIRPEPGKSTAMPLNVSYRVGRIADVVRGRWLDLGCADGGY
                     TAELLRQGAAEVIGVDAEEDRIAQAAARNLPHASFQVAQSEDLPFPDAYFDGVFMNEV
                     FEHVTDEKETMREVARILAPGGRLVLISPNRWFPFEGHGMRTSFFKTGYPVPLLPWLP
                     QSLASRWMTARNYWPRQLADHAQSAGLTVESRGFIWPVLEMYPWLPRSLRDAYQDHIR
                     FFDQTPGLRRFGVSTLVIARRDGQSWEAGSSSG"
BASE COUNT          496 a          689 c          637 g          365 t
ORIGIN      
        1 ttactatcgc catgctgccc aggctgagga tcgttcccag agactgcggc gaaaagtaat
       61 cctgccccac ccagttagct gccgaataaa gcagtagcgc agcccagcgc tgacgagccg
      121 gcaaggagag cgcttcatag attagataca gcaacggcaa gactgcaagt tccactacca
      181 gctgagccca tttggcataa gcgagaggac tcgtcacgcc agctactttg tcgaaccagg
      241 ccgcgaatgc gaagaatcct ggccagtttt gataaatatc gatctgctga ttgatcctgc
      301 cgtgcgcgcc catgtactga acaacaccga tagtcttata gagccatgag taccggcctt
      361 gtgaatatac aataggggcg gttccgtaga gcataactac gagtgctgta gtatgcgcag
      421 tcatccgcca gcgagaaagc cgctggcggg ttagctcaat cgtgaccgac acgataagaa
      481 gagcgattgc ggcatagaag acaaacggca ggaccgacag cagcccgtat ggcccgagca
      541 ctttggtatc agtgcgagct actcccaccg cccacatgac caggctgacc ggcaggagga
      601 catctgagat gtgccactgc ttatccacgg agtcacccga ggacggaaaa cccgtgcggt
      661 tgccctggtt ttgcacgacg ctcaccgttc aggccccacg tgtacgccga cgccgacggg
      721 ccaggccgat gatcaaccca acgagactca gcccagccac aacctggaac agacccagcg
      781 gatgccaggc atgaacccac aacatgactg tcgtcaggag aaccagcacc gcgaggctga
      841 gtaccatcga tgtggccgct tcggaccatt gtcccatccg cggccagttg ccgacgatgg
      901 ctcgcccggg gacaaaaaac gcgaaggcta ccgtcagcag aacccgcagc ggcccagacc
      961 agccgacgaa gaccaacgcg accaacaaga ccgatagcac gatcgcagtc acatcgagca
     1021 tgtcggcttg ccgggtcgca ggttgccgga tctctgcgct tcggctagcc actcgacgat
     1081 cccgcttccc aggactgccc gtcacgacgg gctatcacca gcgttgatac tccgaaccgg
     1141 cgaaggccag gcgtctggtc gaagaaacga atgtggtcct ggtatgcgtc acgcagggac
     1201 ctcggaagcc agggatacat ctcgaggact ggccagataa atccgcggct ctccacggtc
     1261 aggcctgctg actgggcgtg atccgccagc tgtcttggcc agtagttgcg cgcggtcatc
     1321 caccggctgg ccagtgactg aggcagccaa ggcagcagcg gtacagggta ccctgtcttg
     1381 aaaaacgatg ttcgcatacc gtgaccttca aagggaaacc agcgattcgg gcttatcagg
     1441 acgagccgcc cgccaggtgc cagaatacgc gcgacctcgc gcatggtttc cttttcatcg
     1501 gtcacgtgct cgaacacttc gttcatgaag acgccgtcga agtacgcgtc cggaaacggg
     1561 agatcttcgc tctgggcgac ctggaacgag gcatgcggca gattcctggc ggccgcctgg
     1621 gcgatccggt cctcctcggc gtccactccg atcacctcgg ctgcgccctg ccgcagcagt
     1681 tcggcggtgt accccccgtc tgcacagccc aggtcgagcc agcggcctct gaccacatca
     1741 gcgatgcggc ccacccggta cgagacgtta aggggcatgg ccgtggattt gcccggctcc
     1801 ggtcggatga gactgttcat gcgatcaccg ggcagaacgc cccggcccga agcgtctgga
     1861 cgtctgcgac agcgcgtcca gggctagaac atctctgata cgagatccaa acagacatga
     1921 aggactaccc atcatccaag gtcacgggac tgagtcagcc tagcgcctgc ggccacatgg
     1981 catggtatcc cgcgctaggt tagccaggca tgctccttgc caggctgacc tgactctttc
     2041 gagatggtga ctcggtgttc tggcggcggc agccgagcgg gccgcccgga tcaaagaatc
     2101 gtcacccggc accacgccag caactgggaa accaacagca ggggagctca ccctcagggc
     2161 caagcgcgaa cgagcaggct aaacggc
//
LOCUS       DASRPQ010002080         3903 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_249348, whole genome shotgun sequence.
ACCESSION   DASRPQ010002080 DASRPQ010000000
VERSION     DASRPQ010002080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3903
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_249348"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(164..586)
                     /locus_tag="VFD73_23595"
     CDS             complement(164..586)
                     /locus_tag="VFD73_23595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76962.1"
                     /translation="MLPVTGRWSVPILTVLLLGCGSKPTPAADPSPVVFEDRLVISDT
                     DDKSPLRIAPAQLPGPGQCRLWYPGRRLGDQPRAGACGEIETTAPGGSWVLYRPVQDP
                     RLVQVRVIDLDQPGLVTQVRVYDAAQGTYLGSKQRRDQ"
     gene            696..1223
                     /locus_tag="VFD73_23600"
     CDS             696..1223
                     /locus_tag="VFD73_23600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI76963.1"
                     /translation="MDFSLQDATLVLRATPSVLRSWLADLPDAWTSRNEGPNSWSPYD
                     VVGHLIHGERTDWIPRLQLLLSYGESRPFTPFDRYAQFRESQGKSLHQLLDTFSELRS
                     SNLSRLASLELTPEHLQRRGRHPELGPVTAEQLLATWVVHDLNHIGQIARVMSRQYSG
                     AVGPWIEYLPILTRR"
     gene            1343..1900
                     /locus_tag="VFD73_23605"
     CDS             1343..1900
                     /locus_tag="VFD73_23605"
                     /inference="COORDINATES: protein motif:HMM:NF017970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1003 domain-containing protein"
                     /protein_id="HZI76964.1"
                     /translation="MRDESAPVEPSSHGLAQVVERNIRALLLRRQKDEGSRTWQERAA
                     DRITRFTGSMTFVYMHLLLFGGWIAVNLGWIPGLPRFDRSFVVLAMVASVEAIFLSTF
                     VLITQNRMAAMADKRADLDLQISLLAEHEVTRLITLVTGIAERMGIPAASDPELAELS
                     KDVAPEKVMDKMEANERAFSTKSAT"
     gene            complement(1906..2370)
                     /locus_tag="VFD73_23610"
     CDS             complement(1906..2370)
                     /locus_tag="VFD73_23610"
                     /inference="COORDINATES: protein motif:HMM:NF017935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HZI76965.1"
                     /translation="MSALPPSFPVSDASRRKHRTATMFSRALRLRCPHCGGAPIFLTW
                     SHLVPNCPVCGLGLERGEQGYWLGAYFFNLMAVEVVFSVWFVGFLVFTWPNPPWQLFQ
                     VSSIVLMLIVPFAFFPYSKTLFLAFDLLVRPPSEEDFAVPHEEALNLRRKQV"
     gene            complement(2403..3308)
                     /locus_tag="VFD73_23615"
     CDS             complement(2403..3308)
                     /locus_tag="VFD73_23615"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI76966.1"
                     /translation="MAARGLSSFDLALMQRGRPLVQHIEGRFSGSGGTRLFYQAWLPE
                     ARVPRAVVVNLHGLGDHSSLYPALGDTIPGWGMALYAFDMRGNGRSPGQRAYVRGWHE
                     YRDDLGAFLAALREWEPEVPVFLLGNSLGGLVVLEYALLHPEGLSGVIAAAPPLGKIG
                     VPPVLMALGRLCSRVLPRFSLQVGMDLSGLARDPTVIQAVLTDPLFHRRGTARLSTEV
                     TSTIQRVQLRAGTYALPLLILHGSADRMVPPDGSREFFSKVRSAGSDFKEYPGAYHGL
                     FADTDADRVIQDLRQWIEARLGSSL"
     gene            complement(3269..3784)
                     /locus_tag="VFD73_23620"
     CDS             complement(3269..3784)
                     /locus_tag="VFD73_23620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76967.1"
                     /translation="MCYFLYIASPLTLSEVRSMMPEGITVDLADPAEQGTLKALHRGI
                     QTVAKLLIGRCSCDFVRQRSSTRQEDERHLRERYRRAGVSRAEAIAGLERHRAGESIP
                     PPPAGWPRALVDFVLEHARNAGPTVYVLTFCPPSSGLQFRPPVRRLPADQITPDLNQW
                     LLEGSPVLISR"
BASE COUNT          802 a         1186 c         1219 g          696 t
ORIGIN      
        1 cagtcggatg gtgggctgga gctggggcag cttacgatcg ggtgaagatg tctggggggt
       61 gggggcgggg agttgcggca cagcgggctc cgacggtctt cggggtttgt tcggcatcga
      121 caaaccgaat atatcccgaa gaactgttac gtcaagaatc ctgttactga tcccgccgct
      181 gtttcgatcc gaggtaggta ccctgcgccg catcatagac gcgaacttgc gtaacgagtc
      241 cgggctgatc caggtctatc actcgtacct gcaccaggcg gggatcctga accggccggt
      301 acaagaccca actccctccc ggtgccgttg tctcgatctc accgcaggca cctgctcgag
      361 gctggtcgcc gagtctacgc ccaggatacc atagacggca ctgtccggga cccggcaact
      421 gagccggagc gatccggagc ggcgacttgt cgtcggtatc gctgatcacc aggcggtctt
      481 cgaacacaac aggactggga tctgccgcag gcgtgggctt ggagccgcac cccaagagga
      541 ggacggtcag tattggaact gaccatcgac cggtgactgg aagcatgtgg cttctccagg
      601 gaagttctgg tctcaaccta ccgcagggct tttgttatcg gtgcgggtca ggacagactt
      661 aaggagtctg cgccggtctc taacggagag acgatatgga tttctccctg caggatgcca
      721 ctctggtgct ccgagcgacg ccatcggtgc tccgaagctg gctggccgac ctcccggatg
      781 cttggaccag tcgaaatgag ggacccaata gctggagtcc ttatgacgtc gtgggacacc
      841 tcattcacgg cgagcggacc gactggattc cccggttgca gctgctgctc agctatggcg
      901 agagccgacc cttcaccccg ttcgaccgct acgcccagtt tcgcgaatcc caggggaagt
      961 ccctccatca attgctcgat accttttccg agctacggag ctcgaatctg agccgcctgg
     1021 catcgctcga gctcacccct gaacatttac aacgccgagg acgccatccc gagctcgggc
     1081 cggttacggc agaacagctc ttggcaacat gggtcgttca cgacctcaac cacatcggtc
     1141 agatcgcccg ggtgatgagc cggcagtatt ccggggcggt gggcccatgg atcgagtatc
     1201 tccccatcct gacacgccgt taaatctcgc gtgaccctcg ccacaccagc ccaggtcgcc
     1261 cgcctgtacc tatagggtgg tctgctggct cgtatcagca agagcgccag ccgatgtcta
     1321 ctcgagcttc gggggcgagg tcatgaggga tgaaagtgcg ccagtagagc ccagctcgca
     1381 cgggctggcc caggtggttg agcgaaacat tcgagcgctg ttgttgcgac ggcagaagga
     1441 cgaaggaagc cgaacctggc aggagcgcgc ggccgaccgg attacccgat ttaccggcag
     1501 catgaccttc gtctacatgc acctgttgct gttcggcggc tggatcgcag tcaatctcgg
     1561 atggatccca ggcctcccgc gattcgaccg atcgttcgtg gttttagcga tggtagcatc
     1621 ggtcgaggcg atctttctct cgacttttgt tctgatcact caaaaccgca tggcggcaat
     1681 ggccgacaag cgggccgatc tcgatctcca gatcagtctg ctggccgagc acgaggtgac
     1741 caggctcatt acgctggtaa cggggatagc ggagcggatg ggaatacctg cagcgtcaga
     1801 tccggagttg gccgagctct ccaaggacgt ggcccccgag aaggtcatgg acaaaatgga
     1861 ggccaatgaa cgcgccttca gcacgaaaag cgcaacgtga gccgcttaca cctgtttgcg
     1921 ccggaggttg agcgcctcct cgtggggcac cgcgaaatcc tcttctgacg gagggcgcac
     1981 cagcagatcg aaggccagga agagtgtctt ggagtacggg aagaaggcaa acggcacaat
     2041 cagcatgagc acgatgctgc tcacctggaa aagctgccat ggcggattgg gccaggtgaa
     2101 gacgaggaaa cccacgaacc agacgctgaa gacgacctcc accgccatca aattgaagaa
     2161 ataggccccc agccagtagc cttgctcccc tcgctccagc cccagcccgc acaccggaca
     2221 gttgggcacc aggtgggacc aggtgagaaa gattggagca ccgccgcaat gcgggcatcg
     2281 caaacgtaag gcgcgggaga acatggtcgc ggtccggtgc ttacggcggc tggcgtcgga
     2341 cactgggaag gatgggggca gcgcggacat gatctggatg gcggctcagg atccaggttc
     2401 tctcacaaac tactcccgag tcgagcctcg atccactgcc gcaggtcctg gatcacccga
     2461 tcggcatcgg tgtcggcgaa gagtccatga taagccccgg gatattcctt gaaatcgctg
     2521 ccggccgagc gaaccttcga gaaaaattcc cggctgccat cgggagggac cattcgatcg
     2581 gccgagccat gcaagatcaa caggggaaga gcatacgttc ctgctcggag ctggactcgc
     2641 tggatggtgc tggtcacctc ggtggaaaga cgcgcggtgc cgcggcggtg gaacaggggg
     2701 tcggtgagta ccgcctggat cacggtggga tcgcgtgcca ggccgctcaa gtccattccg
     2761 acctgaaggg agaatcgagg cagaacccga gagcagagcc gacccagcgc catcagaacg
     2821 ggtgggacgc cgattttccc caacggagga gctgccgcaa tgacgccgga gagaccttca
     2881 ggatggagca gcgcgtattc gaggaccacg agtccgccga gactgttgcc cagtaggaac
     2941 accggcactt ccggctccca ctctcgcagc gctgccagga aggccccgag gtcgtcccgg
     3001 tactcgtgcc aaccccgcac atatgcccgc tggccgggag agcgcccatt tcctcgcatg
     3061 tcgaacgcgt agagcgccat tccccatccg ggaatggtgt ctccgagcgc gggatacagg
     3121 ctactgtggt cacccagacc gtggaggttt accactaccg cacgaggcac tcgagcctca
     3181 ggcagccacg cttgatagaa gagccgggta cctcccgatc cggaaaacct gccctcgatg
     3241 tgctgaacca agggacggcc ccgctgcatt agcgcgagat caaaactgga gagccctcga
     3301 gcagccattg attcaggtcg ggggtgatct ggtcggcagg tagccgccga accggtgggc
     3361 gaaactggag gccggaggac ggtgggcaga aggtcagcac gtacaccgta ggacctgcgt
     3421 tccgcgcatg ctccagcacg aagtcgacca gcgctcgggg ccatcccgcc ggcggaggcg
     3481 gtatgctttc accggcccga tgtcgctcca gcccggcaat ggcctcagcc cgtgagacgc
     3541 cggcccggcg atatcgctcc cggaggtggc gctcatcttc ctgcctggtg gagctgcgct
     3601 gacgcacgaa atcgcaggag catcggccaa tgagcaattt cgcgactgtc tgaatcccgc
     3661 ggtgcagcgc tttcagcgtc ccctgctcgg ccggatcagc caggtcaacg gtgatgcctt
     3721 cgggcatcat cgagcgcact tcgctcaatg tcaggggact cgcgatatag aggaagtagc
     3781 acactcgttc ttacctttta ccgctcaccg cctttcagat cggcaggtca tccctcacca
     3841 gcaccagaat ggcggcctgg ggaacgacca aatatttctt ctcctcgaac gtgatctcga
     3901 ccg
//
LOCUS       DASRPQ010002081         1278 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3713460, whole genome shotgun sequence.
ACCESSION   DASRPQ010002081 DASRPQ010000000
VERSION     DASRPQ010002081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3713460"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(206..>1278)
                     /locus_tag="VFD73_23625"
     CDS             complement(206..>1278)
                     /locus_tag="VFD73_23625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HZI76968.1"
                     /translation="IAVGPWDDGPLEAELLAQADRLVGGSDAILVIDDTALPKKGQLS
                     VGVAPQYASALGKNANCQTLVSLTLAQGEVPVPIALRLFLPETWTNNPDRMRRAGVPD
                     AFQSERSKPEIALAELKQALNAGVRFRAVLADAGYGISAAFRQALSALGLLWAAGIPR
                     IQKAYPVDVQLVPAPPTRGRPRKTLIPDREAVAAEKMVADQPWRWLTWRHGTKGPLRA
                     RFAAVRVRIADGPEVRLQGRTGQHLPGDEVWLVGERRASGERKYYLSNLPPDTTLKQL
                     ASTIKARWVCEQAHQQLKEELGLDHFEGRSWRGLHRHALMTLMAYLFLQDQRLQGAKR
                     GKKEGQRATSATQLPQHQAHAA"
BASE COUNT          209 a          412 c          431 g          226 t
ORIGIN      
        1 tggtattagt tgcccaccgg gcggagtctg acccgcgccg gatgaaaccg gtctatggtg
       61 gacatcggcg ctggccctga ggtcggttcg ttcttggtgc cgcgagcccg cgtattagca
      121 ctaccttggc attctcgtca gagagccttg tgtgaagtgg gccaaacagt tcggacatcg
      181 caggtgcatg acgtgagcga gttgatcaag cagcatgcgc ctgatgctgg ggaagctggg
      241 ttgcggaggt ggcccgctgg ccttcctttt tcccccgctt ggcgccttgg aggcgctgat
      301 cctgcaagaa cagatacgcc atcagcgtca tcagcgcgtg ccgatgcagc ccccgccagg
      361 agcggccctc gaagtggtcg agcccgagct cctccttgag ctgctgatgg gcttgctcgc
      421 acacccaacg cgctttgatc gtggaggcca gttgcttcag cgttgtgtcg ggcggcaagt
      481 tggacaggta atacttccgc tcccctgacg cgcggcgctc gcccacaagc cagacctcat
      541 cgccgggaag atgctggccg gtccggccct gcagtcgcac ttcaggccca tccgcgatcc
      601 gaacgcgcac cgccgcaaac cgggcccgga ggggtccttt ggtgccgtgc cgccaggtga
      661 gccagcgcca gggctgatct gcaaccatct tttcagccgc aaccgcctcc cgatccggga
      721 tgagggtctt gcgcggccgc ccccgtgtgg gaggagcggg caccaactgc acgtcgacgg
      781 ggtaggcctt ctggatgcgc gggatccctg ccgcccacag cagccccaaa gccgagagcg
      841 cctggcgaaa ggcggcgctg atcccatagc cggcatccgc cagcacggcc cggaagcgaa
      901 caccggcgtt gagggcctgc ttgagttcag ccagcgcgat ctcaggcttg gagcgctcgg
      961 attggaatgc gtccggcacg cccgcgcgcc gcatgcggtc cgggttgttg gtccaggtct
     1021 cgggtagaaa caggcgcaag gcgatcggga cagggacttc gccctgggcg agcgtgagcg
     1081 agaccagggt ctgacagttt gcgttcttgc ccagcgccga ggcgtactga ggggccaccc
     1141 cgaccgagag ctggcctttc ttgggcaggg cggtgtcatc gatgactagg atggcatccg
     1201 acccgcccac cagccgatcc gcttgggcaa gcagttcggc ttcgagcggt ccgtcgtccc
     1261 agggcccaac ggcgatga
//
LOCUS       DASRPQ010002082         2020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3413032, whole genome shotgun sequence.
ACCESSION   DASRPQ010002082 DASRPQ010000000
VERSION     DASRPQ010002082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3413032"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2020)
                     /locus_tag="VFD73_23630"
     CDS             complement(<1..>2020)
                     /locus_tag="VFD73_23630"
                     /inference="COORDINATES: protein motif:HMM:NF024247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HZI76969.1"
                     /translation="YTPEMAAQETGLSTATVQRLAAEFSAARPSLAVAGGIGNQHAGA
                     VEVCAAVNLLNYVAGNVGQTVSFGADADAGEGFAGLEELLRTIDGGGIDVLLVHDANP
                     AYALPRASGFPAKFRKVGFKVSTSMYLDETAALCDLLLPQHHALERWDDLRPRAGVYS
                     LMQPVMEPVFNTLPAGEVLLRTAKKMGGPLAQFTAPTYLAYLQSRWQGLATARHEADF
                     AGFWRTAVQRGGLFEASPAASAVTVAPGADQVKYTRPTFEGNGDFVLLTYPHALLYDG
                     RGANKPWLLENADPVTKITWHSWVELHPDTARRLDVRDGEIVRVTSPHGSVEAPVFVY
                     AGVRPDVVAIPLGLGHTEYGAYARGRGINALDLLAGAKAPFVPYLSTRVSVTKTGGYK
                     KLASIAGVPRQLGRGIAESISLDAAQKGLTIEQAYIAEGLGKHEVNTDNELEAVKGWS
                     QEQAAATRYGDYAAGTPHWGMAIDLAKCTGCQACVTACYAENNIPTVGEGEILKGREM
                     TWMRIERYWEDDSAQQDSATARFIPMLCQHCNNAPCEPVCPVYAAYHTADGLNGQAYN
                     RCVGTRYCANNCPYKVRYFNWYKYNQLAWPEPLQLQLNPDVTVRARGVMEKCTFCIQR
                     IRGAQNNARLEDRPIRDGEFTTACAQACPSDAIVFGNLKDPTSKVARLQ"
BASE COUNT          338 a          668 c          646 g          368 t
ORIGIN      
        1 ctggagtcgg gcgaccttgc tggtgggatc cttcaggttt ccgaacacga tggcgtccga
       61 tggacacgcc tgggcgcatg cggtggtgaa ctcaccatct cgaatcgggc gatcctccag
      121 ccgcgcattg ttctgcgcgc cacgaatccg ctgaatgcag aaggtgcact tctccatgac
      181 gccgcgggcg cggaccgtca cgtccgggtt gagctgaagc tgaagcggct ccggccacgc
      241 cagctggttg tacttatacc agttgaagta gcgcaccttg tagggacagt tgttggcgca
      301 gtaccgggtc cccacgcatc ggttgtacgc ctgtccgttc aggccgtcgg ccgtatgata
      361 ggcggcgtac accgggcaca ccggctcgca gggagcgttg ttgcagtgct ggcagagcat
      421 cgggatgaac cgcgcagtgg cggaatcctg ctgggccgag tcgtcctccc agtagcgctc
      481 gatccgcatc caggtcatct cccgaccctt gagaatctcc ccctcgccca ccgtgggaat
      541 gttgttttcc gcgtagcacg ccgtgacaca tgcctggcat ccagtacact tggcgaggtc
      601 gatcgccatc ccccagtgcg gagtgcctgc ggcatagtcg ccgtaccggg tagcggctgc
      661 ctgctcctga ctccacccct tcaccgcctc cagctcgttg tcggtattga cctcgtgctt
      721 gcccaaacct tcggcgatat acgcctgctc gatggtcaat cccttctgcg cggcatcgag
      781 tgagatcgac tcggcgatgc cgcggccaag ttgccggggc actccggcga tcgacgccag
      841 cttcttgtag cctccggttt tggtcaccga tacccgggtc gagaggtaag ggacaaacgg
      901 cgccttggct ccagccagga gatcgagcgc gttgattccg cgcccccggg catacgcccc
      961 gtattcggtg tgtcccagcc cgagcggaat ggcgaccacg tccggccgca cgccggcgta
     1021 tacgaagacc ggtgcctcga ccgatccgtg cggggaggtg accctgacga tttccccatc
     1081 gcgcacatcg agccgccgag cggtgtcggg gtggagctct acccaggaat gccaggtgat
     1141 cttggtgacc gggtcggcgt tctccagcag ccacggcttg ttcgccccgc ggccgtcata
     1201 gagcagggcg tggggatagg tgagcaggac aaagtcgccg ttgccctcga aagtcggccg
     1261 ggtgtatttg acctgatcgg ccccgggcgc gaccgttacc gcggaagctg cgggggaagc
     1321 ttcgaagagc cctccccgtt gcaccgcggt tcgccaaaag ccggcgaagt cggcctcgtg
     1381 ccgggcagtt gccaggccct gccagcgcga ctgcaggtag gccagatacg tgggcgcagt
     1441 gaactgcgcc agcgggccgc ccatcttctt ggccgtcctc agtaagactt cgcccgcagg
     1501 cagggtattg aataccggtt ccatcaccgg ctgcatcagg ctgtacaccc cggctcgggg
     1561 gcgaagatcg tcccagcgct ccagggcatg gtgctggggc agaaggagat cgcacagggc
     1621 ggcggtctcg tcgaggtaca tggaggtcga gaccttgaag ccgaccttcc ggaacttcgc
     1681 cgggaaccca ctcgcacgag gaagtgcgta tgcgggattg gcgtcgtgca ccagcaggac
     1741 atctatgccg ccgccatcga ttgtgcgcag cagctcttcc agccccgcga acccctctcc
     1801 cgcgtcggca tcagcaccaa agctcaccgt ctgacccaca ttcccggcaa cgtagttcag
     1861 cagattcacc gcggcacaga cctcgaccgc gccggcgtgc tgattcccga tgccacccgc
     1921 caccgcgaga ctggggcggg cggcgctgaa ctcggcggcg agtcgttgaa ccgtggcggt
     1981 ggagagcccc gtctcctgcg ccgccatctc cggtgtatac
//
LOCUS       DASRPQ010002083         1080 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1515529, whole genome shotgun sequence.
ACCESSION   DASRPQ010002083 DASRPQ010000000
VERSION     DASRPQ010002083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1515529"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1047)
                     /locus_tag="VFD73_23635"
     CDS             complement(<1..1047)
                     /locus_tag="VFD73_23635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76970.1"
                     /translation="MQRRAALNQPTAVMVWNRNWPSLTQASSRSDRLTVKKLVAINPQ
                     AAREHGLEGQLGRWGESFLAGREQEAAEALRIAGSLGDALSDLGGDQSLQSSVETIRK
                     ALDRRDRDELLCLARAHQDLREGSSFFQRLAFERAAPRLRKAHEDLARSGSIASLWAA
                     MGLAGVDLYSARYEQAARGFQELIRQTAMERYPALRGRARWGLGMTRSRQGLLAEALA
                     QFQEAARHFSVAGETENLGAVGVRMAETFRFLGQDDAAWAHRHRALRGLLLYPSSRRL
                     HDLLWESADAALEIGEPRVALVLQDEGVGVAERSRDALILAEALIRRSRVRLEAGQAQ
                     AARQDLNEASRQNRP"
BASE COUNT          194 a          395 c          316 g          175 t
ORIGIN      
        1 cggccggttc tggcggctcg cttcattcag gtcctgccgg gcagcttgcg cctggcccgc
       61 ttccaggcga acccggctgc gacgtatgag cgcctcggcc agaatgagcg catcccggga
      121 gcgctcagcc acgccgactc cctcgtcctg tagcaccagc gccactcgtg gctcgccaat
      181 ctcgagcgcg gcatctgccg actcccacag gagatcatgc agacggcgcg acgagggata
      241 aagcaagagc ccgcgcaagg cgcggtgacg atgagcccag gcagcatcat cctgacccag
      301 gaaacggaaa gtctcggcca tccgcacgcc aaccgcgcca aggttttcgg tctcgccggc
      361 cacggagaaa tgacgggccg cttcctggaa ctgcgcgaga gcttcggcca acaaaccctg
      421 gcggctgcgc gtcatgccca acccccatcg agcccgaccc cgcagagccg ggtacctctc
      481 catggcggtt tgccggatca actcctgaaa tccgcgtgca gcctgttcgt accgggcgga
      541 atagagatcg accccagcaa gccccatcgc tgcccacagg gacgcgatgc tcccggaacg
      601 tgccagatcc tcgtgggcct tccgcagcct cggcgccgcc ctttcgaaag ccaaccgctg
      661 aaaaaaggag ctgccctccc gcaggtcctg atgagcacgc gccaggcaca ggagctcatc
      721 gcgatctctt cgatccaagg ctttcctgat cgtctccacc gagctttgaa gactctggtc
      781 accgcccaga tcggacagcg catcgccgag tgagcccgcg atccgcaatg cctcggccgc
      841 ctcctgctcg cggcccgcga ggaaggattc cccccatcga ccgagctgac cttccagccc
      901 atgctcccgg gccgcttgtg ggttgattgc gaccagcttc ttgaccgtga gccggtcgct
      961 ccgggaggac gcttgcgtca gtgaaggcca attccgattc cagaccatga ccgccgtcgg
     1021 ctggttcaag gccgccctgc gctgcatcgc ctcttccgac cagggggact tcggctccag
//
LOCUS       DASRPQ010002084         1664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2785533, whole genome shotgun sequence.
ACCESSION   DASRPQ010002084 DASRPQ010000000
VERSION     DASRPQ010002084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1664
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2785533"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1664)
                     /locus_tag="VFD73_23640"
     CDS             complement(<1..>1664)
                     /locus_tag="VFD73_23640"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HZI76971.1"
                     /translation="MALSRSRIREWTLDSVAATVGLHDSMIRLDTAYAVWKGARVGGS
                     GTLGWSAPHTGRMEITLAADSLIAFDSLLLAATGQTRGNSPDSHPLGGTAHGNVQLAG
                     SLDTLEMNGNLLLEKVEWQQMATPRITGAFTWIGGKRPQLTAAIGSDSLVAQKWVFHQ
                     LGGQVRGWADSLDWNVGSGIGTSTRVDGAGRWWQRGESQVAWFDSLTFSLPNHRYRLD
                     QSFAVTLSDSAPAISPLTLRTNDGSGLIQLGGRIPGSSEGSLAVRVLGLDLHDAYGAL
                     QRDTAGVAGLADLDVRVGGTAEAPTFRGTTTLNSGRFGDFEAPFIQGVVDYADRKLEA
                     NLLLWRTGENVLQVETRLPLDLAFRGVKQRQVEGPLTVHARGDSVDLGILEALTPGIT
                     GVRGTLTVDMNVAGSWKTPVFTGGARIQRGAMSIPGLGVRYEGLEGSASFRGDSLVLS
                     SLQLRSGGTLGITGSVVLSNFSRPVLDLGFRADAFRALDVKNFLSFTGTGTLRLQGPL
                     FHSTLTGNLNANSGVLYFADLVSKRIIDLEDPTIADLVDTTLLRRE"
BASE COUNT          309 a          562 c          484 g          309 t
ORIGIN      
        1 ttctctcggc gcagcaacgt tgtgtcgacc aggtcagcga tcgtcgggtc ttccaggtcg
       61 atgatccgtt tactcaccag atcggcaaag tacagcactc cgctgttggc gttcaggttg
      121 ccggtcaagg tcgaatgaaa cagcggcccc tgcagccgaa gcgttccagt accggtgaat
      181 gacaggaaat ttttcacatc gagggcgcgg aacgcgtccg cccggaaccc gaggtcgagg
      241 actgggcgcg agaagttact gaggacgacc gagccggtga tcccgagtgt gccgccactc
      301 ctgagctgca ggctgctcag aaccagtgaa tctccccgaa agctggcgct tccttccaag
      361 ccttcgtatc gcacacccag gccaggaatc gacatcgccc cgcgctggat ccgagcgcca
      421 ccggtaaaca ccggcgtctt ccaactgccg gccacgttca tgtcgacggt taaggtacca
      481 cgtacaccgg tgatgcccgg cgtcaacgcc tccagaattc cgagatcgac actgtcgcca
      541 cgggcatgga cggtcagtgg cccttccacc tgacgttgtt tgaccccgcg gaaggcaaga
      601 tccaatggaa gcctggtctc cacctgcagc acgttctctc ccgttctcca taacagcaga
      661 ttggcttcca gcttcctgtc ggcatagtcg accacgccct gtatgaacgg ggcctcgaag
      721 tctccgaatc ttccggagtt cagcgtcgtc gtcccgcgga aggtgggcgc ctctgcggtt
      781 cccccgactc gcacgtcgag atccgccaat ccggcgactc ccgcggtgtc ccgctgcagc
      841 gcgccgtagg catcgtgcaa gtccagcccc agaacgcgca ccgccaaaga tccctccgag
      901 ctccccggga ttcggccacc gagctggatc aaccctgagc cgtcgttggt gcggagtgtg
      961 agtgggctga tggccggcgc cgagtcgctc agcgtaacgg cgaagctctg gtccaggcga
     1021 taccggtggt tcggcaggct gaaggtcagg ctatcgaacc acgccacctg ggactcaccc
     1081 cgctgccacc accgtccggc gccatcgact cgggtcgagg taccgatccc cgagcctacg
     1141 ttccaatcga gggagtcggc ccaaccgcgg acctgaccgc cgagctggtg gaagacccat
     1201 ttctgggcca ccagtgaatc cgagccgatc gccgcggtga gctgcggccg cttaccgcca
     1261 atccaggtaa aggctccggt aattctgggt gtcgccatct gctgccattc aaccttttcg
     1321 agcagcaggt ttccattcat ttccagagta tcgagactgc cggctaactg cacgttgccg
     1381 tgcgccgtcc ctccgagcgg atgactgtca ggcgaatttc ctcgggtctg tcccgttgcc
     1441 gccagaagca acgaatcgaa ggcaatcaag ctgtccgccg cgagcgtgat ctccatgcga
     1501 ccggtgtgtg gcgcgctcca gccgagggtc cccgagccac ctacccgtgc acccttccaa
     1561 acagcgtagg cagtgtccag gcggatcatg ctgtcatgca gtcccaccgt ggcagcgacg
     1621 ctgtccagcg tccattcccg gatgcggctt ctcgacagcg ccat
//
LOCUS       DASRPQ010002085         1011 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3413188, whole genome shotgun sequence.
ACCESSION   DASRPQ010002085 DASRPQ010000000
VERSION     DASRPQ010002085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3413188"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..813
                     /locus_tag="VFD73_23645"
     CDS             <1..813
                     /locus_tag="VFD73_23645"
                     /inference="COORDINATES: protein motif:HMM:NF025179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNVR domain-containing protein"
                     /protein_id="HZI76972.1"
                     /translation="ASLAGLAGQLGVSSASGTSLSPDFIAYVLKSREVLTSTLQSQFP
                     DPRSGNQERPLLDIMRAKGRTDAARLSQGVRKLDRAVKTKVDHATGIVTLSVNASDPK
                     LAAAVANRMKDILNDFNLERRQSQSREQARFTHERMVQAEAELRDAEAAQLRFLQANR
                     EFTGSPILEFENSRLQRAVDLKQEVYVSLAKEYDQARIAEVRDTPVITTIDSAVAPDR
                     RSSPRPLLNAIIALIAGGIFAFALIYLLEQRHRLLPPGSLGGVRTAPERNAP"
BASE COUNT          204 a          331 c          297 g          179 t
ORIGIN      
        1 gccagcctgg caggcctggc cggtcagctc ggggtatcca gcgcctcggg gacttccctc
       61 tccccggact ttattgcgta tgtgttgaag agccgcgaag tgctgaccag caccttgcaa
      121 tcgcaatttc ccgatccacg ctcaggcaat caggaaagac ctctgctgga tatcatgcgt
      181 gccaagggcc gcaccgatgc tgctcgcctg agtcagggtg tgcgcaagct cgatcgagcg
      241 gtcaagacga aagtggatca cgcgaccggc atagtgaccc tcagcgtcaa cgcctccgat
      301 cccaagctgg cggcggcagt ggccaaccgc atgaaggaca tcctgaacga cttcaatctc
      361 gagcgtcgac aatcgcagtc gcgggagcag gctcgcttta cccacgagcg gatggtccaa
      421 gcggaagcgg agctccgaga tgcggaggcc gcacagcttc gcttcctcca ggccaaccgc
      481 gagttcactg gatcaccgat cctggaattc gagaacagcc gattacagcg ggcagtagac
      541 ctcaagcagg aagtgtatgt cagcctggcg aaagaatacg accaggcccg gatcgccgag
      601 gttcgcgaca caccggtcat tacgaccatc gacagcgccg tggcaccgga tcgccggtcc
      661 tcgccccggc cactgctgaa tgcaatcatc gcgctgatcg ccggaggcat cttcgccttc
      721 gcgctcattt acctcctcga gcaacgccac cgattgctgc cgccggggtc gcttggtggc
      781 gtccgcaccg caccggagag aaacgcgcct tgagccggcg cactgagaga cgactgcacc
      841 tagcgatcgc tgaggcaaag tagtcgtgtc cgctccgctc tccgctggtt tactcggacg
      901 aagactccgc agcttcggcg gcactcgaga aataagtcct gccgagttct tgacgatcgg
      961 gttcctggcc tccgtcaccc tgggccagat cgccaaggtg ccactgatct c
//
LOCUS       DASRPQ010002086         2009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4636197, whole genome shotgun sequence.
ACCESSION   DASRPQ010002086 DASRPQ010000000
VERSION     DASRPQ010002086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4636197"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            71..1210
                     /locus_tag="VFD73_23650"
     CDS             71..1210
                     /locus_tag="VFD73_23650"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HZI76973.1"
                     /translation="MGVAAWLLLHLPPLQSAMLGAALASTDPVMLRSLVRRSSLPANA
                     REALRIEGGINDVVLLPIVILSILALGGPGGDRNGEVGRDVVGLLLLGPALGALVGFA
                     AITLLERVRNRVGVRRDYESLYALGVAFTAYAAAEAVHGSGFLSAFAAGVVIARLDVE
                     LCDCFLDYGQATAEMFLLFTFVAFGAGLIWMGFNVITPATLLFAAIALVARSLVLLPV
                     LRRSDLDPTTRRVIAWAAPRGLSSLLLILLPVFAGLPGSGQLFAITSFVVLLSVALHG
                     TGIALYLRKSEAPVGGAAESRDAPVTASPDPALRIPEKITLNELRWRQQSGEPLIIAD
                     VRTDRSYLADNLTAKGAVRLPPDGAARRARELGLDHHATVVLYCA"
     gene            1187..1357
                     /locus_tag="VFD73_23655"
                     /pseudo
     CDS             1187..1357
                     /locus_tag="VFD73_23655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_263577183.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
     gene            1572..>2009
                     /locus_tag="VFD73_23660"
     CDS             1572..>2009
                     /locus_tag="VFD73_23660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76974.1"
                     /translation="MRVLQFAKQSVVTVALVSLTLAGCGGESSPDAPFNAAGTSADLQ
                     AMDSTFASPAFASFSTFSLMFDAALGGSPIISNSAAAISVRGGSTAAIKAAAARSAQR
                     LAAIFAQQSKLSASKSAHGGASMAISSTIAGKTFIYDAGSNSYV"
BASE COUNT          311 a          654 c          657 g          387 t
ORIGIN      
        1 tgtgatccgc cggcccaagc ggctgttgtt caccatcctg ggaccggcca cgctgatacc
       61 ggccgttctc atgggagtgg ccgcctggct cctgcttcat ctgccaccgc tccagtccgc
      121 gatgctggga gcggctctcg catcgaccga tccggtcatg ctccggagtc tggtccgccg
      181 ctccagcctg ccggcgaatg cgcgcgaggc gctccgcata gagggcggga tcaacgacgt
      241 cgtcctgctt ccgatcgtca tcctcagcat cctcgccctc ggtggacccg gcggggaccg
      301 gaacggggag gttggacggg acgtggtcgg cctccttctg ttgggcccag cactcggggc
      361 tctggtcgga tttgccgcga tcacgctgct ggagagggtt cggaaccggg ttggcgttcg
      421 ccgggattat gagtcgctct acgcgctcgg cgttgcattc acggcgtatg ccgccgccga
      481 ggcggtccac ggaagcggat ttctttcggc attcgccgcg ggcgtcgtca tcgcgcggct
      541 ggacgtcgag ctgtgcgact gctttctcga ctacgggcag gccacagcgg agatgttcct
      601 gctgttcacc ttcgtggcgt tcggggcggg gctcatctgg atggggttca acgtcataac
      661 gccggccact ctgctgtttg ccgccattgc tctggtggcc cgctcgttgg tgctgctccc
      721 ggtgctcagg cgttccgatc tcgatcccac cacacgcagg gtgatagcgt gggctgcacc
      781 gcgcggtttg agctctcttc tcttaattct cctgccggtc ttcgccggac ttcctggaag
      841 cggacagcta ttcgccatca ccagcttcgt ggtgctgctg tcggtcgcgc tgcacggcac
      901 cgggatcgcc ctctatttga ggaagagcga ggcgccagtt ggcggggccg cggagagcag
      961 ggacgcgccg gtcacggcca gccccgaccc agcgctgcgc attcccgaaa aaatcacctt
     1021 gaacgagctt cgttggcggc agcaatcggg cgagcctctc atcatcgccg atgtccgaac
     1081 cgaccggagc taccttgccg acaatctcac cgccaaaggc gcggttcggc tgcctcccga
     1141 tggcgcggcg cggcgagccc gggagctcgg cctggatcat cacgcgacgg tagtgctgta
     1201 ctgtgcgtga aaggacgaag ccacaagcgc ccgggtggcg cgagagcttc gagcggcagg
     1261 gtggcccaag gcccgggcgt tagtgggcgg atgggccgcc tggcaggctg aaggaatgcc
     1321 agtcgagtcg cggagcgagc tggtagcaga gagctagacg tttgcagggt tcctgtgcac
     1381 cctcgcaatg actcgcggct tcaaactggc acaccggttg cctagtccca cctcagacca
     1441 ggccgcctga gtagcggcgg accctggcaa cccccgaaaa tcgctcaaaa cacccccgtt
     1501 tgacggcttt cgaccagcag cccgagtgcc gggctgcgtt cacactgctc ctgattatgg
     1561 aggcggaacc catgcgtgtg ctgcaattcg cgaagcaatc tgtcgtgacg gtggcgctcg
     1621 tgtcactgac actggcaggc tgcggcggtg agtcgagccc cgatgcgccg ttcaatgcgg
     1681 cggggacttc ggcggacctg caggcgatgg actcgacgtt tgcctctccg gcgttcgcca
     1741 gcttctccac cttcagcttg atgttcgatg ccgctctggg cggatcaccg atcatctcca
     1801 attcggctgc cgcgatcagc gtacgtggtg gcagcaccgc ggcgatcaag gcagccgcgg
     1861 cacggagcgc ccagcggctg gccgcgatct tcgcccaaca gtcgaaactc agcgcttcaa
     1921 agtcggcaca cggcggggct tccatggcga tctcgagcac catcgccggg aagaccttca
     1981 tttatgatgc cggctccaac tcctacgtg
//
LOCUS       DASRPQ010002087         1151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2428869, whole genome shotgun sequence.
ACCESSION   DASRPQ010002087 DASRPQ010000000
VERSION     DASRPQ010002087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2428869"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..918)
                     /locus_tag="VFD73_23665"
     CDS             complement(<1..918)
                     /locus_tag="VFD73_23665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76975.1"
                     /translation="MRGTIVLSLVMLSIAYGTISAQTCRGLASFSTGPLQVSGQGSMT
                     LESNAVGAGVAYGLTDGFFADGSIASRSIDTFSGSSLEVGAGAGYEIALGKFHVCPQA
                     STVLGFGPNKPFGAGEDRSSRSAQIGVAAGTLAGTIRQWQILPTFGLSYAYRKDQAQD
                     DAGTMLFQISDHYALAQFGIGLVLRNLSIRPQLDLPLSFLNSNPSVGITVGYNFGRRR
                     SAETVMRGTVVLSLVMLFLARGTILAQTCRGLASFSTGPVQVSGEGSMTLESNAVGAG
                     VAYGLTKGFFADGSIANRSIDTFSGSSLEL"
     regulatory      complement(936..1030)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
BASE COUNT          232 a          341 c          370 g          208 t
ORIGIN      
        1 gagctcgagc gaggatccgc tgaaggtgtc gatggatcgg ttggcaatgc tgccatcggc
       61 aaagaatcct ttggtcagcc catacgccac gccggcgccg actgcgttgg actccagggt
      121 catcgatccc tctccgctca cctgaaccgg gccagtagag aatgaagcca ggcctcggca
      181 ggtctgggcc aagatggtcc cgcgggcgag gaagagcatg acgagtgaga gcacgacggt
      241 accgcgcatg actgtctccg ctgatcttcg gcggccgaag ttgtagccca cagtgattcc
      301 aacgctcgga ttgctgttca agaacgagag cggaagatcg agctgcgggc gaatcgacag
      361 gttccgcagc accaggccga tgccgaactg ggccagcgcg tagtggtcgg agatctggaa
      421 cagcatcgtc ccggcgtcat cctgagcctg atcttttcgg taagcgtagg acaggccgaa
      481 agtgggaagt atctgccatt gcctgatcgt accggcgagc gttccagcgg ccactccgat
      541 ctgcgcagag cggctcgagc ggtcctcgcc tgccccgaac ggcttgttgg ggccgaagcc
      601 aaggactgtg ctcgcttggg ggcaaacgtg gaattttccc aaggcaattt cgtacccggc
      661 tccagcgcca acctcgagcg aggatccgct gaaggtgtcg atggatcggc tggcaatgct
      721 gccatcggca aaaaatccgt cagtcagccc atatgccaca ccggcgccca ctgcgttgga
      781 ctccagggtc atcgatccct gtccgctcac ctgaagcggg ccagtagaga atgaggccag
      841 gcctcggcag gtctgggccg agatggtgcc gtaggcgatg gaaagcatga cgagtgagag
      901 cacgatggta ccgcgcatga ctgtctccgc tgatcttcgg cggccggacg atcctgcgcg
      961 ctcatgcccg ctgcgctcag gactcctggc tttgcgtccc cgccttgcgg cgggtttgcc
     1021 attatcgggg tccgcggaat gcggaagggt gccctgcgca aagcaaatca tggaccaaac
     1081 gcctcatcct gagcaccgaa gaaggatctt ccgggtccgg tgtaggatcc tcggctcagg
     1141 atgaaacgaa a
//
LOCUS       DASRPQ010002088         3203 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3713856, whole genome shotgun sequence.
ACCESSION   DASRPQ010002088 DASRPQ010000000
VERSION     DASRPQ010002088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3203
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3713856"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..745
                     /locus_tag="VFD73_23670"
     CDS             <1..745
                     /locus_tag="VFD73_23670"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HZI76976.1"
                     /translation="ITLQQIASLSTEMRPEKIVRRDQFRTITVGAYPKHGVLSSEVLK
                     ASRPAIDSLAQRLPIGVKLKIAGEQEKQDDGFLELAMVLATSVGLIFIALAVQFQNAI
                     KPFLVFGAIPYGMVGAIIALGIMGAPFGFMAFLGVVSLVGVIVSHVIVLFDFIEEAHE
                     RGEGFEESLLDAGIVRLRPVLITVGATVFALVPLAIHGGPLWEPLCYAQIGGLAVATV
                     ITLLLVPVFYSIAVLDLKVIKWEAHPRNT"
     gene            789..1220
                     /locus_tag="VFD73_23675"
     CDS             789..1220
                     /locus_tag="VFD73_23675"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZI76977.1"
                     /translation="MTKSIVVATLIAAGVAAPVLCQSSPSALKRQVFAAESSFAASMA
                     ERNLAAFATYVSPEAIFFGDTTVMRGKEEVLARWRGFFIHANAPFSWKPDVIEVLPSG
                     TLALSSGPVFDPDGKKVGTFNSIWRRGRNGQWQVIFDKGCR"
     gene            1222..1557
                     /locus_tag="VFD73_23680"
     CDS             1222..1557
                     /locus_tag="VFD73_23680"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HZI76978.1"
                     /translation="MFVRIWQFRVAPEKANQFRSVYGLDGDWALLFGREIGFLGTELL
                     QSAAHPNIYITIDTWDSEGAWAAFLRAWGDEYAELDRLSGELTVSEGEIGSFVTAAAT
                     PLRAGGSPP"
     gene            1640..2203
                     /locus_tag="VFD73_23685"
     CDS             1640..2203
                     /locus_tag="VFD73_23685"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HZI76979.1"
                     /translation="MKQKLMSLGLAAVALAGTSRSLAAQEAPRRFFVEGLGGAVVPTF
                     DISEVAKTGWALGGTLGYRVNDRWTLMAEFDYGRHKDKLTGDVDINTLHYIGKLGYSL
                     TGPKERGWEAAVNLGAGAVTFDVQDAPRNFTYFAINAGAKLTYNFNPKLAFVLSPQGD
                     IAFSDEAEVTTNNSWVWPVTAGVRLSF"
     gene            2276..>3203
                     /locus_tag="VFD73_23690"
     CDS             2276..>3203
                     /locus_tag="VFD73_23690"
                     /inference="COORDINATES: protein motif:HMM:NF014375.4"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HZI76980.1"
                     /translation="MTRDQPIAGESSDGGLLSIGALSSATGIPIDTIRTWERRYGFPV
                     PERKPSGHRVYPLAIVPRLRRAAQAIARGHRAAEVVPASERALDALLDSVSLRGSPVR
                     ERDPLSVPSADVDGDNLLGMVRRFDADALQRKFQSEWVRLGPIEFLERSAAPLLSRLG
                     TAWAEGALEVRHEHFGSGVLGDFLRAVRAPLDGRAAGPTVALATLPDELHGLGLQMAA
                     VVFAVAGWRSLVLGVDTPIPQIVALAREARLHAVALSCVQKRPGKVGAPWRALRRELP
                     QRVALLVGGHGASAAPRLRGVETMSDLQTLDRW"
BASE COUNT          529 a          974 c         1071 g          629 t
ORIGIN      
        1 gatcaccctc cagcagatcg cttcgctctc gaccgagatg cggccggaga agatcgtgcg
       61 gcgggaccag ttccggacca tcaccgttgg agcgtatccc aaacacggcg tgctttcgtc
      121 cgaggtgttg aaggcctccc gccccgccat cgacagcctg gctcagcggc taccgattgg
      181 tgtcaagctc aagatcgcgg gcgagcagga gaagcaggac gacggattcc tggagctggc
      241 gatggtgctg gctacctcgg tcggactgat cttcattgcg ctcgcggtcc agttccagaa
      301 cgcgatcaag cccttcctgg tcttcggagc cattccctac ggcatggtgg gcgcgatcat
      361 tgcgctcggc atcatgggcg cgccgttcgg cttcatggcg ttcctggggg tggtgagcct
      421 cgtaggtgtg atcgtaagcc acgtgatcgt gctgttcgac ttcatcgagg aggcgcacga
      481 gcggggcgaa gggttcgagg agtcgttgct cgatgccggc atcgtccgac tgcggccggt
      541 gctgatcacg gtgggggcga cggtgtttgc actggtgccg ctggccatcc acggggggcc
      601 gctgtgggag ccgctgtgtt atgcccagat cggagggctg gctgtagcga cggtgattac
      661 cctgctcctg gtgccggtgt tctattccat cgcggtactg gacctcaaag tgattaagtg
      721 ggaggcgcac cccaggaaca catagccgat cgttgccgta gagactcgat cttcatccgg
      781 aaggccccgt gaccaaatcg attgtcgtgg ccaccctgat cgccgccggg gtggccgcac
      841 cagtgctttg ccagtcttca ccctccgccc tcaagcggca ggtgttcgcc gcggagagca
      901 gctttgccgc cagcatggcg gaaagaaacc tggcggcgtt cgccacctac gtctcgcccg
      961 aggcgatctt cttcggcgac acgacggtga tgcgcggaaa ggaagaggtg ctggcgcgct
     1021 ggcgggggtt ttttattcac gcgaatgccc cgttttcctg gaagcccgat gtgatcgagg
     1081 tcctcccctc cgggactctg gcgctcagca gcggaccggt cttcgaccct gacggcaaaa
     1141 aggtgggaac cttcaattcg atctggcggc gtgggcggaa cggccagtgg caggtcatct
     1201 tcgataaagg gtgccgctga cgtgttcgtt cgtatttggc agtttcgcgt ggccccggaa
     1261 aaggccaacc agtttcgcag cgtctacggg ctggatggag actgggccct gctttttggt
     1321 cgggagatcg gttttcttgg caccgagctg ctccaatcgg ccgctcaccc caacatctac
     1381 atcacgatcg atacctggga cagcgaaggg gcatgggccg cgtttctgcg ggcctggggc
     1441 gatgagtacg cggagctcga ccggctttca ggcgagctca ccgtgtcgga gggtgagatc
     1501 gggagcttcg tcaccgcggc ggcgactccg ctccgagccg gcggcagtcc gccgtagtgg
     1561 gagccccttg cgggaatttc ataacctgtt cacattctgt tcaggatata cttctaacct
     1621 gagctgaggg aacagagtga tgaaacagaa gctgatgagc ctgggcctgg ccgcggtggc
     1681 actggccggc accagtcgca gtctggcggc gcaggaggcg ccgcgacggt tcttcgtcga
     1741 gggattgggc ggcgcggtgg tccccacttt cgacatcagc gaagtcgcca agaccggctg
     1801 ggcgctcggc ggcacgctgg ggtaccgggt caatgatcgc tggacgctga tggccgagtt
     1861 cgattacggc aggcacaagg acaagctcac cggggatgtg gatatcaata ccctccacta
     1921 catcggcaag ctcggctact cgctgactgg acccaaggag cggggctggg aggcggcggt
     1981 gaatttaggc gcgggtgcgg tcaccttcga cgtgcaggac gcgccgcgga atttcaccta
     2041 tttcgccatc aatgcgggcg ccaagctcac gtacaacttc aacccgaagc tcgcgttcgt
     2101 gctgtctcct cagggcgaca tcgccttcag cgacgaggcc gaagtcacaa cgaacaactc
     2161 gtgggtctgg ccggtgaccg ccggtgtccg gctttccttc tagcgacaaa cgagccccgg
     2221 agcgtaccgg ggctcgctcg tctctccacc aattgaaagt tgcgtacgtt tgcgcatgac
     2281 ccgtgaccag ccgattgcag gggagtcttc cgatggaggg cttctctcca tcggcgcgct
     2341 ctccagcgcc accggtattc ctatcgacac catccgaacc tgggagcgtc ggtacggctt
     2401 cccggtcccc gagcgaaaac catcgggtca tcgagtatac ccgctggcga tcgtgccgcg
     2461 gctgcgacga gcggcccagg ccatcgctcg aggtcatcga gccgccgagg ttgttcccgc
     2521 ctcggaacga gctctcgatg cgttgctcga ttctgtttct ctgcgaggat cgccggtccg
     2581 ggagcgcgat cccctctccg tcccctcagc cgatgtggac ggcgataacc tgctgggaat
     2641 ggtgcgccgc tttgacgccg acgcgctcca gcgaaagttc cagtcggagt gggtccggct
     2701 cgggccgatc gagttcctgg aaaggtcagc ggcacctctt ctgtcccgcc tgggaacagc
     2761 atgggccgaa ggagcgctgg aggtgcggca cgagcacttc ggctccggcg tgctcggcga
     2821 tttccttcgg gcggtccggg caccactgga tgggcgggcc gccgggccga ccgttgccct
     2881 tgcgaccctt ccggatgagc tgcacggtct gggactgcag atggccgccg tggtctttgc
     2941 agtggccggc tggcggtcct tggtgctcgg cgtcgatact ccgatcccac agatcgttgc
     3001 attggcccga gaagctcggc tccatgcggt agcattgagc tgcgtgcaga agcggccggg
     3061 aaaagtcggc gcgccttggc gcgcactccg acgagagctg cctcagcgag tggccctcct
     3121 ggtcggcggc catggagctt cggcggcccc ccggctgaga ggagttgaga ccatgtctga
     3181 cctacagact ctggatcgtt ggg
//
LOCUS       DASRPQ010002089         1155 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1516154, whole genome shotgun sequence.
ACCESSION   DASRPQ010002089 DASRPQ010000000
VERSION     DASRPQ010002089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1516154"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(436..735)
                     /locus_tag="VFD73_23695"
     CDS             complement(436..735)
                     /locus_tag="VFD73_23695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76981.1"
                     /translation="MPAIHTASGGREPQRYEIRVRGPIGPMTMQAFPTLAQGRSGQDT
                     LLVGSLPDHCVLYGVIHQLEALGLQLLEIRRLPTSDPERPAQSRDPSEHDPPRPA"
     gene            876..>1155
                     /locus_tag="VFD73_23700"
     CDS             876..>1155
                     /locus_tag="VFD73_23700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76982.1"
                     /translation="MRTWLVPRPGLFGLLSRAERVVYVSAPAGSGKTFLLRSWIAAEG
                     LGERAAWVSVGREEHDPQAFWMSVLDSLRGTRTGSERVRELTAAPDLDG"
BASE COUNT          182 a          334 c          418 g          221 t
ORIGIN      
        1 ccagcacgac ccgctcagac accggcatcc ctctgaactg cggtaatcag acttgatacg
       61 acgccgccag acggtgtcgg gctgcatggt aaggagaagg tctacggttc gattccgtaa
      121 cggggctcca gctcaagtat atttttccga aaaaaattcc agcgagtaat cgcgccagtg
      181 gggactaacg gctttcggca gggaatgtgg acagctcaat cagcgccact cccgcgagac
      241 cctgccccca gattcgggat gccccgagca gtccgtgaga ttccgggatt accgccgccg
      301 atcgggacac gtacctgaac gatcttgacg cgcacacgcg agacgctgga ccacgatagt
      361 cgcgcctcgc atgcgcctgc ctgccaactg tgcccacgac cagcacgaac cagcctcgtg
      421 ggccgacgtg ttgccttagg ccgggcgggg tgggtcgtgc tcgcttgggt cacgcgactg
      481 ggccggtcgt tcggggtcgc tggttggcag gcggcggatt tccagcagct gcaggccgag
      541 tgcttcgagc tggtggatca ccccgtacag gacgcaatgg tcgggcagcg agccgacaag
      601 cagggtgtcc tgaccgcttc ggccctgggc cagcgtcggg aatgcttgca tggtcatcgg
      661 gccgatcggc cctcggacgc ggatctcgta gcgctgcggc tcacggccgc cgctggctgt
      721 gtggatggct ggcatgcgat cagattcggc gctgggcggg tgagcgcgcc tcgcatggtt
      781 cagatgaata tgatggtttg gttgaggatc gtcgtggtgc aaccttgtgc gtcgtggccg
      841 tctcggcagc tgtcatcgaa caccccggtt ttggtatgag aacgtggcta gttccgcggc
      901 cgggcctgtt tggtctgctc agccgggcgg agcgtgtagt gtacgtgtcg gcgccggcgg
      961 gcagcgggaa gacgttcctg ttgcgctcct ggattgcggc ggagggtctg ggcgagcgcg
     1021 cggcgtgggt gtcggttggg cgcgaggagc acgatccgca agcgttctgg atgtcggttc
     1081 tcgactcgtt gcggggtacg cggacggggt cggagcgggt gcgggagctg accgccgcgc
     1141 ctgacctgga cgggg
//
LOCUS       DASRPQ010002090         3626 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1176413, whole genome shotgun sequence.
ACCESSION   DASRPQ010002090 DASRPQ010000000
VERSION     DASRPQ010002090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3626
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1176413"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..757)
                     /locus_tag="VFD73_23705"
     CDS             complement(<1..757)
                     /locus_tag="VFD73_23705"
                     /inference="COORDINATES: protein motif:HMM:NF020738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent
                     methylenetetrahydromethanopterin dehydrogenase"
                     /protein_id="HZI76983.1"
                     /translation="MRKLLLQLDSSRLPSAFDQVVAYDAGADVVMSYGGITEGDVRDL
                     IHGCIFTRGPKDLHNTAVWIGGSNMSAGEQLLAMAQDALFAPFSVSIMLDSNGSNTTA
                     VAAVVKIEETLGDVAGKKILILAGTGPVGQRAAGLLAKGGADVTITSRKPEQGEKARQ
                     FISARFNVQVNAVTMNDPAALPALLQGVEVLLNSGPAGIQMVPNQIWSAADSLEMAVD
                     LNAVPPLGIEGVEVNDAGTKRNGVVVFGAFGVGN"
     gene            complement(855..1367)
                     /gene="fae"
                     /locus_tag="VFD73_23710"
     CDS             complement(855..1367)
                     /gene="fae"
                     /locus_tag="VFD73_23710"
                     /inference="COORDINATES: protein motif:HMM:TIGR03126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016840 - carbon-nitrogen lyase activity
                     [Evidence IEA];
                     GO_process: GO:0016051 - carbohydrate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formaldehyde-activating enzyme"
                     /protein_id="HZI76984.1"
                     /translation="MAGEFFIGESLVGDGNEIAHIDLIIGSKSGPAGLAFTQALSHNS
                     DGFSTLLAVVTPNLPAKPDTLLFNKVTIKGAKQAVQMFGPAQAAVARAVMDSVASGVI
                     DKGRANDLCILVGVFIHWQAESDKKIYDYNYQATKESIQRALQNKPTIDEVLQRYKAA
                     RHPFASGAEG"
     gene            1669..1899
                     /locus_tag="VFD73_23715"
     CDS             1669..1899
                     /locus_tag="VFD73_23715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76985.1"
                     /translation="MPTRQTSAFDRFLRQLRAGGRTNMYGAVPYLMKAFDLDRASAFA
                     VICDWLDRQDVSQEVAPEKPVRRRRLSGASQS"
     gene            1966..>3626
                     /locus_tag="VFD73_23720"
     CDS             1966..>3626
                     /locus_tag="VFD73_23720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76986.1"
                     /translation="MIGTSGSSLRLGFVFAFALAVAGSPLQAQYFGQNKVQYRTFDFQ
                     VLKTEHFDIYFYPTERGAAVQAGRMAERWRTRLGTVFGHDLSGRQPLILYASPAEFQQ
                     TNAIEGDLGEGTGGVTEALRRRIVLPVGGTLADLNHVIGHELTHAFQYDITGSGRPGA
                     YGAMPAATALPLWFIEGMAEYMSLGPVDAPTAMWMRGAIQDTAKDSLPSFRQLDDPRF
                     FPYRYGHALLAFVAGHWGDQAIGELLRQGARRRGVDQAIRGVLAVTPDQLVSRWHSEL
                     HATYDPLEGQTQPAESFGPRVVQAKGDNRYNIAPSLSPDGSQVMYLSDRDLFSIDLFL
                     ADARNGHIIRQITKTAVDPHLQSLESIESAGSWSPDGKRFTFSAVTSGRPVLVLYDVS
                     NGKRVREVKFPDLGEILNPSWSPDGHAIAFSGVAGGLTDLFIYDLDSGKTRRLTQDDF
                     ADLQPSWSPDGRTLAFATDRFTTDLDSLRMGPLALGLIDVSSGRISRAPGAGTARQLN
                     PQWAPDGASLYFLSDPNGITNIFRVALATGQVSQVTNLFTGVSGIT"
BASE COUNT          666 a         1128 c         1110 g          722 t
ORIGIN      
        1 agttgccgac accgaacgcc ccgaacacca cgacgccgtt gcgcttcgtg ccggcatcat
       61 tcacttcgac tccctcgatc ccgagcggcg ggactgcatt gagatccacc gccatctcga
      121 ggctgtcggc ggcgctccag atctggttcg gaaccatctg aatgccggca ggtccggagt
      181 tgaggaggac ctccactccc tgaagcaatg cgggaagtgc ggcggggtcg ttcatggtca
      241 cggcgttgac ctgaacgttg aatcgcgcgc tgatgaactg acgcgccttt tcgccctgct
      301 ccggcttgcg ggaggtaatg gtgacgtcgg caccgccctt ggcgagcaat ccggcggcgc
      361 gctggccaac ggggcccgtg ccggcgagga tcagaatctt cttgccggcc acatcgccca
      421 gcgtctcctc gatcttcact accgccgcca ccgcggtcgt gttggacccg ttggagtcca
      481 gcatgatgga gacggaaaac ggggcaaaca gtgcgtcctg ggccatggca agaagctgct
      541 caccggccga catgttgctc cccccgatcc acacggcagt gttatgcagg tctttgggtc
      601 cgcgggtgaa aatgcatccg tgaatcagat ccctgacatc gccttcggtg attccgccgt
      661 agctcatcac cacgtcggcc ccggcatcgt aggcaacgac ttgatcaaac gcgctcggca
      721 gccgggagct gtcgagctga agcaagagct tacgcattgg tactacgtct cctggacagg
      781 tgtctctaaa agacgagggg ccgcccgacc gcgggccgcc cctcgtgata cttcaactca
      841 gcgggactgt acgatcagcc ttcggcgccg ctggcgaacg gatggcgcgc ggccttgtag
      901 cgctgcagca cctcgtcgat cgtcggcttg ttctggagcg cccgctggat cgactccttg
      961 gtcgcttgat aattgtaatc gtaaatcttc ttgtcgctct cggcctgcca gtgaatgaat
     1021 acacccacca gaatgcagag atcgttggcc cggcccttgt cgatgacacc ggaggcaacg
     1081 ctgtccatga ctgcacgagc caccgcggcc tgggcaggac cgaacatctg caccgcctgc
     1141 ttggcgcctt tgatggtgac cttattgaag agcagcgtgt cgggcttggc cggaaggttg
     1201 ggagtgacaa cggccaacaa ggtggagaag ccgtcggagt tgtgagagag cgcctgggtg
     1261 aacgccagac ccgcaggtcc ggatttggag ccgatgatca ggtcgatatg tgcaatctcg
     1321 ttgccatctc cgaccagcga ttcaccgata aagaattccc cagccatacc tgcctccata
     1381 tccgttttgt tgaagaagga gaggatccga cgccacatag tttagctcga cgttggcgat
     1441 ggtgagctcg gatgaggagc agcgcggggg aacggacaac ccaaccacgc ggtcccgcag
     1501 ggcggtagct caatgcactg agtacttgcc gtacgttgag gcccctagta tggaagcggc
     1561 atttggcggt gtcaagtgaa cgaaatgccg ctctcgcacc ttcttgcaga gaggaagtga
     1621 ggagattgcg ccgcttgaac gcacatgtgt ttcgggatat attcgggtat gccgactcga
     1681 caaaccagtg ccttcgaccg gtttctccgt cagctgcgtg cgggtggtcg caccaacatg
     1741 tacggcgctg ttccgtatct aatgaaagcg ttcgacctcg atcgtgcctc ggcgttcgca
     1801 gtcatctgtg actggctgga ccgtcaggac gtttcccagg aggttgcgcc ggaaaaaccg
     1861 gttcgtcggc ggaggctctc gggcgcgtcc cagtcctgaa ccttgtgttc tgggtcactg
     1921 ctgccagttc ctccgctcgg cattgtcgcg tggaggcact ttcatatgat aggaacttcg
     1981 ggcagttccc tgcgtttggg tttcgttttt gcctttgcgc tcgccgtcgc cggctcaccg
     2041 ttgcaagccc agtacttcgg gcagaacaaa gtccagtatc gcaccttcga tttccaggtg
     2101 ctcaagaccg agcacttcga catctatttc tatcccactg aacgcggcgc ggccgtgcag
     2161 gcaggccgga tggctgagcg ctggcgtacc cggctcggta cagtgttcgg gcatgatttg
     2221 tcagggcgac agccgctgat cttgtacgcc agccccgcag aatttcagca gacgaatgcc
     2281 atcgagggag acctcggaga aggaaccggc ggcgtgaccg aagcgctccg gcgccggatc
     2341 gtcctgccgg ttggagggac actggcggac ctgaaccacg tgatcgggca cgagctgact
     2401 cacgcgtttc aatacgacat caccgggagc ggacggcccg gcgcctacgg agcgatgccg
     2461 gcagctacag ccctgccact ctggttcatc gaaggcatgg ccgagtacat gtcgctcggt
     2521 ccggtcgacg cgcccacggc aatgtggatg agaggggcta tccaggatac cgccaaggac
     2581 agcctgccca gcttcaggca gctggacgac ccacgctttt tcccgtaccg ctacgggcac
     2641 gccctgctgg cgttcgtggc cggacattgg ggcgaccaag ccatcggcga gctgctgcgg
     2701 cagggtgccc ggcgacgggg tgtagaccag gccattcgcg gcgttcttgc ggtaacaccc
     2761 gaccagctgg tgtcgcgctg gcattccgag ctgcacgcca cgtacgatcc tctcgagggt
     2821 caaacccagc cggcggagag cttcgggccc cgggttgtgc aagccaaggg ggataatcga
     2881 tacaacatcg cgccgtccct gagtccggac ggcagccagg tcatgtacct ctccgaccgg
     2941 gatctttttt ccatcgacct ctttctggcc gatgcccgga acgggcacat catccggcag
     3001 atcacgaaga ccgcggttga cccgcatctc caaagcctgg aatccatcga gtcggcgggc
     3061 agctggtcgc ctgatggcaa gcggttcacc ttctccgccg ttacctcggg tcgcccggtg
     3121 ctggtcctct acgatgtttc caatggcaag cgcgtacgcg aggtcaaatt cccggatttg
     3181 ggggaaatcc tcaatccaag ctggtccccg gacggacacg cgatcgcctt ttccggcgtg
     3241 gcgggcggcc tgaccgacct gttcatctat gatctcgact ccggcaagac tcgccgcctc
     3301 acccaggacg actttgccga tctccagcct tcctggtcgc cagatgggcg gacgctggcc
     3361 tttgccaccg atcgattcac caccgacctc gattcgcttc gtatggggcc gctcgcgttg
     3421 ggattgatcg atgtgagcag tggccggatc agccgggcac cgggggcagg aactgcgcga
     3481 cagctcaacc ctcaatgggc ccccgatggt gccagcttgt atttcctttc ggacccgaat
     3541 ggcatcacca acattttccg ggtcgctctg gcgaccggcc aggtctccca ggtcaccaac
     3601 ctgttcaccg gcgtcagcgg gatcac
//
LOCUS       DASRPQ010002091         1977 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4005180, whole genome shotgun sequence.
ACCESSION   DASRPQ010002091 DASRPQ010000000
VERSION     DASRPQ010002091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1977
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4005180"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..618)
                     /locus_tag="VFD73_23725"
     CDS             complement(<1..618)
                     /locus_tag="VFD73_23725"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HZI76987.1"
                     /translation="MARRRGPLPAILQEVTPLEWAIALAAWFVLDIASATPLQHQLVA
                     RGIPVTLQQVRIAQAIDWLLWAGLLPFIFFTLDRLPLRRAVWLKHLLGWIAAALLFGA
                     IHAVLSWPLIHLIARILNVPAQALSVPDLRLTRLMLDDAENFNLAVIAYVLLQLVHRS
                     RAERRRAGEVERSLRDAKLHALGLELQPHFLFNTLNGIAALVRSDP"
     gene            855..1268
                     /locus_tag="VFD73_23730"
     CDS             855..1268
                     /locus_tag="VFD73_23730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76988.1"
                     /translation="MSRWQLAPTVLLASVACAPSTHSTAFRQVSPKSSAEQVEVFTEG
                     VPEGRPYEELGVIEVSASELSNARYGDLIQRARARAAEMGADAIVVSRDPQSRSMGVA
                     YVPAHRNNGGQLVTGTARTIETPRIQVSAILWKEP"
     gene            complement(1279..1476)
                     /locus_tag="VFD73_23735"
     CDS             complement(1279..1476)
                     /locus_tag="VFD73_23735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76989.1"
                     /translation="MSPRTLADGPLALFLATLPSLVLVALWLGRARVDWNIILPGVAW
                     RLFLVLYTAPFITQRRPRRTH"
BASE COUNT          384 a          624 c          650 g          319 t
ORIGIN      
        1 cgggtcggag cgcaccaggg cggcgatgcc gttcagcgtg ttgaacagaa aatggggctg
       61 cagctccagc cccaaagcat gaagcttggc atcgcgcaat gagcgctcta cctctcccgc
      121 ccggcggcgc tcggcgcggg accgatgcac cagttgcaag aggacatacg cgatgacggc
      181 gagattgaag ttctcggcat cgtcgagcat gagtcgggtg agccggaggt cgggcaccga
      241 caaagcctgg gccggcacgt tgaggatccg ggcgatcaga tgaatcagcg gccaggaaag
      301 cacggcatgg atggcgccga acagcaacgc ggcggcaatc caccccaaca ggtgcttcag
      361 ccagaccgcg cggcgaagcg gcagccggtc cagggtaaag aagatgaacg gcagcaggcc
      421 ggcccagagc agccagtcga tcgcctgcgc aatccgtacc tgctgcaggg tgaccgggat
      481 accgcgcgcg accagttgat gctgcagcgg ggtcgcggag gcaatgtcga gcacgaacca
      541 ggcggccagc gcgatggccc actcgagtgg ggtgacctct tgcaggatgg ctggtaacgg
      601 tccgcgtcga cgcgccatgg aactacgcta ttacccgaat gagaggcccg ccattcgccg
      661 tgggacgaag gaccacaatt ctgggacgaa tctctgatca tccctccccc cctccgcctc
      721 tccgtctctc gtctctccgt ccgtgcgctc accccatttt ctggttcgtt cgtcccatca
      781 tctctcctca gagcccaccg tttctccgtt cttgggatcc ggtcaccacc gcgaacccaa
      841 acaaggagga ccccatgtcc cgctggcaac tcgccccgac cgtgctcctg gcatccgttg
      901 cgtgtgcccc gagcactcac tccaccgcct tccggcaagt gtcaccaaag agttcggcgg
      961 agcaggttga agtgttcacc gaaggtgttc ccgagggtcg tccctatgag gagctgggcg
     1021 tcatcgaagt ctccgcgtcg gaactgagca acgctcgcta cggcgacctg atccagaggg
     1081 cccgggctcg cgcggctgag atgggcgccg atgccatcgt cgtgagccgc gatccgcagt
     1141 cccgcagcat gggagtagcc tatgtgccgg cgcatcggaa caacggtggc cagctggtaa
     1201 ccggcaccgc ccgcaccatc gagacgccgc gtattcaggt gtcggcgatc ctgtggaagg
     1261 agccctgagg tggggcggtc agtgcgtacg tctcggcctt cgctgggtga tgaatggtgc
     1321 tgtgtagaga accaggaaga gtcgccaggc gacgccgggt agaatgatgt tccagtccac
     1381 ccgagccctg ccgagccaga gcgccaccag taccaggctc ggcagggtgg ccaggaacaa
     1441 ggccagagga ccgtcagcga gggttcgtgg agacaccgtt cgttcaaggg agcggtgacg
     1501 gattaccgct gcagtgagca ccaggctgaa cgctaggaca ccctccacaa tacccgccca
     1561 ggccggcagc gcagtgcgac tggtactggc ccagagcaga agccagcaag acgcaatcag
     1621 ctggagcaga ccgagaacga gaagggttct cgccgataaa gcacgcattc gagagccggg
     1681 gcggattgtg tatcaacttg agccgcaggc cgagtcagcc aaccgctacg ggccgggctg
     1741 ctccagactc ggcctcgagc ggacgatact aagggcgcac ggggtccaat tccatcacgc
     1801 ctttggcatc tctggagcac tttttgggtg actgataaag cggttcaagt agccgccgcg
     1861 cgaggggggt ccgagcctgc tgcggtgcgg taccgggtgc tcattctggc gacggcgctg
     1921 gccttcgtgg ccgggtgccg gatcctgctg tatgcctggg cgcccgaccg cgccagc
//
LOCUS       DASRPQ010002092         1057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4309299, whole genome shotgun sequence.
ACCESSION   DASRPQ010002092 DASRPQ010000000
VERSION     DASRPQ010002092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4309299"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            405..803
                     /locus_tag="VFD73_23740"
     CDS             405..803
                     /locus_tag="VFD73_23740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76990.1"
                     /translation="MRKILVAAAALAIAAGVPAVALAATGGNTSALDLQASKWTSTTQ
                     QATGTTWRSVPGLGLTICALHQVTATLSVQVNGAPASFQIREDGGPIIAPGAVRFVPA
                     GAHDSFSLSFLANAALFEANYTHGFEVEWR"
     gene            complement(875..>1057)
                     /locus_tag="VFD73_23745"
     CDS             complement(875..>1057)
                     /locus_tag="VFD73_23745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76991.1"
                     /translation="QLNYGGRGPANLHPAFPVRTQDSRRNVSGSKTTPTASLKINCSR
                     QPAEDDQPQFSRQIEA"
BASE COUNT          168 a          346 c          344 g          199 t
ORIGIN      
        1 actgttcatg tcagcctccg gtgatacaga gcctgagcgg caagcggtga tacaagggca
       61 tgcgcgggag cagtgccccc gtgtccacac gtgatccggg cctgggccct gtactccccc
      121 gtcttgatcg ccgagacgcg cactcacaca ccgcataggg cgcgcgctag gacaggcgag
      181 ccgcggcccc tgagcgcgtc gttggccgcg ggcgtatcac ggttagcatt acctgctctt
      241 tactaccggg aggaaggtcc tcccgcgcca ttgctgcacc ggcgctgacc gccctgactt
      301 tcctagcgtg cttggcacga tctgttcggg aagtacggct cggcccgaag gctgcggcaa
      361 cgcgctgccc ggatcacctg ggcaggtgca tcgaggaggt tgacatgcgg aagattctgg
      421 tcgcggcggc agcgctcgcc atcgctgcgg gggttccggc tgtggcgctg gccgccaccg
      481 gcggaaacac ttcggcgctg gacctgcagg cgtccaagtg gaccagtacc acacagcaag
      541 ctaccggcac tacctggcgc agcgtccccg ggttgggcct gaccatctgt gccctgcacc
      601 aggtgaccgc tacgctcagt gtgcaagtca atggggcccc cgcctccttc cagatccgcg
      661 aggacggagg tccgatcatc gcgcccggag cggtgcgctt cgttccggcc ggcgcccatg
      721 attccttctc gctctccttc ctggctaacg cggctctatt cgaggccaac tatactcacg
      781 gattcgaggt cgaatggcgg tgacccacag gacagcagac gacgctggaa cgcgccacgc
      841 tcaacctgca atacgagcac ggcacgcaag cctgctaagc ctcgatctgc cgcgagaatt
      901 gtggttgatc gtcttccgcg ggctggcggg agcaattgat cttgaggctg gcggtgggcg
      961 tggtcttgct gccgctcacg tttctgcggc tgtcctgggt tcttaccgga aatgctgggt
     1021 ggaggttcgc cgggccccgc ccgccgtagt tgagttg
//
LOCUS       DASRPQ010002093         1580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1516526, whole genome shotgun sequence.
ACCESSION   DASRPQ010002093 DASRPQ010000000
VERSION     DASRPQ010002093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1516526"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            339..659
                     /locus_tag="VFD73_23750"
     CDS             339..659
                     /locus_tag="VFD73_23750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76992.1"
                     /translation="MATFVFTYRMPAGYVPGGPDTMAAWAAWFDSMGESLSDRGNPVF
                     ESAKLGNCGAETRPGGYTFVNAEDLESAVALAKGSPALEAGGGVEVGAITVLNLDSAS
                     GSQG"
     gene            743..1258
                     /locus_tag="VFD73_23755"
     CDS             743..1258
                     /locus_tag="VFD73_23755"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HZI76993.1"
                     /translation="MTETEPSAAAPGKAGEDYQETIRVKASPDALFDAITTTDGLAAW
                     WNRVSGSGDASGELRFYMNSPEPLVIHVDEATRPRSVQWTVTDCPFLPDWVGTRPAFT
                     ITAVGGGESELEFRHHGLTPELPCFDMCRPSWDHFIAKSLRELVESGQGHPAGSPADL
                     AWRAEMQGTKE"
     gene            1343..>1580
                     /locus_tag="VFD73_23760"
     CDS             1343..>1580
                     /locus_tag="VFD73_23760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZI76994.1"
                     /translation="MAKVIFGNHSSVIVPVQDRESIRRFYCDVLGGTLTKAQPERDFV
                     RLGEDFYIAFLYGDVPDESEFLRSARAVWLELKSD"
BASE COUNT          298 a          511 c          509 g          262 t
ORIGIN      
        1 cgggcaggcc ttgccaggcg gccagcaggg tctcctggag caggtcctcg gcgtcggcct
       61 gcgagccgag gacccggtag cagtgcacct gcagctcgtg gcggtgcggc tcgaccagct
      121 gccagaacgc ctcgccgtcc ccggctctgg cccgcgccag cagctcggta gtcacctgcc
      181 catcctcgca tcgacctcct gcggcccggt tataggtaca gacaccgctc gggtcgaaaa
      241 gctggcgccc ggccgcccag ttcccgctct gcccggtgtc tgcatgatcg agaccgctgt
      301 cccggctggc gacgggaccg atgagaggag cagctgctat ggcgacgttt gtgttcacct
      361 accggatgcc cgccgggtat gtccccggcg ggcccgacac catggccgcc tgggcagcct
      421 ggttcgacag catgggcgaa agcctctccg accggggcaa cccggtcttc gagtcagcga
      481 agctcggcaa ctgcggagcg gagacaaggc ccgggggcta caccttcgtc aatgccgagg
      541 accttgagtc agccgtcgcg ctggccaagg gatcccctgc tctcgaggca ggcggcggcg
      601 tcgaggtcgg cgccatcacg gtgctcaatc tcgactcggc ctccggcagc caaggctgaa
      661 agctgacgct gacggcagcc agcaccgacg gccgctacca agacactcat gagcgacgga
      721 gactatgaaa gggagctgtc tcatgacgga gactgaacca tctgctgcag cgccaggaaa
      781 agcgggcgag gactatcagg agaccatccg ggtgaaggcc tcgccagatg ccctgttcga
      841 cgcgataacg accactgatg ggctcgccgc ctggtggaac cgggtcagcg gatccggaga
      901 cgctagcgga gaactcaggt tctacatgaa ctcccccgag ccgctcgtca ttcacgtcga
      961 cgaggcgacg cggcccagat cggtgcagtg gacggtgact gactgcccct tcctccccga
     1021 ctgggtcggc acgcgtccgg ccttcacgat cacggcggtc ggcggcggcg agtccgaact
     1081 cgagttccgc caccacgggc tcacccctga gctcccctgc ttcgacatgt gcaggcccag
     1141 ctgggaccac ttcatcgcga agagcctgcg agaactcgtc gaatccggtc agggccaccc
     1201 cgcaggaagc cctgcagatc tggcctggcg ggcagagatg caagggacca aagagtgagt
     1261 caacgggaaa cgatacccgg gctcattcac tgcgcgcata actgcgcaca tgagctaccg
     1321 cgttctaggt gaggagcagt caatggccaa ggtcattttt gggaatcatt cgtcggttat
     1381 tgttccggtg caggatcggg agagcattcg caggttctat tgtgatgttc tcggcggcac
     1441 gctcactaaa gcgcaacccg aacgggactt cgtccgcctg ggcgaagact tctatatcgc
     1501 gtttctctac ggggatgtcc ccgacgagag cgaattcttg agaagcgcga gagcggtctg
     1561 gctagaactc aagtcggaca
//
LOCUS       DASRPQ010002094         1725 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3059131, whole genome shotgun sequence.
ACCESSION   DASRPQ010002094 DASRPQ010000000
VERSION     DASRPQ010002094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3059131"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1425
                     /locus_tag="VFD73_23765"
     CDS             <1..1425
                     /locus_tag="VFD73_23765"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HZI76995.1"
                     /translation="LKHTGNTPIGSVSRTADQRLAVQVFPAGAIDGMLFKGVRVDVHL
                     QSGVSEEDMHASRARFYKSPDHEGRVVLVLGAGNISGIPSMDLLTKMFNEGKVCVLKM
                     NPVNAYIGPFLEAAFAEPIRQGFLAIVYGGAGEGAYLANHRGVDEVHLTGSDKTFDQI
                     VWGPPGPDRERRKVEGRPALNKPVTAELGNVSPVIVVPGPYSDKELAYQAEDVVAGLT
                     FNASFDCNANKVLILPKGWNLRDKFLAGVERAFGKAAARGAYYPGARDRWLAYSKGHS
                     SIRRFGSESEDVLPWTLVGNVDPDNRNESGFAAESFCPILYQTEIGSADPVEFLDRAV
                     TFANERLWGTLSAGLVVHPKTSKDPTLGAAVERAISKLRYGSVNVNAWSGYTFAFGTP
                     PWGAHPSSTLTDIQSGRGWVHNTPMLEGIEKAVLRHPITAMPKASYFPTHRSAHLLMQ
                     RMTVLEENSSWTRVPAVLAAAMRA"
BASE COUNT          316 a          559 c          552 g          298 t
ORIGIN      
        1 ctcaagcaca ccggcaacac gccgatcggt tcggtcagcc gcaccgccga ccagcggctt
       61 gcggtgcagg tttttcctgc cggcgcgata gacggcatgt tgttcaaggg agtcagggtc
      121 gacgtgcatc tccagtccgg cgtcagcgag gaggacatgc atgccagccg agccagattc
      181 tacaagtctc ccgatcacga aggacgagtg gtgctggtgc tcggcgcggg aaacatcagc
      241 ggcattccaa gcatggacct gctcacgaag atgttcaacg aggggaaggt ctgcgtcctc
      301 aagatgaacc cggtcaacgc ctatatcggt ccgttcctgg aggcggcgtt cgccgaaccg
      361 attcgccaag gcttcctcgc catcgtgtac ggcggcgcgg gcgaaggggc gtacctggcc
      421 aatcatcgcg gtgtggacga ggtgcacctc accggatcag acaagacgtt cgatcaaatc
      481 gtatggggac caccgggacc ggatcgcgag cgtcggaaag tggaggggag accggcgctc
      541 aataagccgg tcaccgcgga gctggggaac gtgtcaccgg tgatcgtggt accgggtccc
      601 tacagcgaca aagagctggc ctatcaggcc gaggacgtcg tcgctggtct caccttcaac
      661 gcatcgttcg actgcaacgc caacaaggtg ttgatcctgc cgaagggctg gaacctccgg
      721 gacaagttcc tggccggagt ggagcgtgcg ttcggcaagg cagccgcccg cggagcgtac
      781 tatccgggcg cgcgggatcg ctggctggcc tattccaagg gacactcctc gatccgccga
      841 ttcggttccg agtcggaaga cgtgttgccc tggacgctgg tcggcaacgt ggatcccgac
      901 aaccgcaatg agtccggctt cgccgccgaa tcgttctgcc ccatcctgta tcagaccgaa
      961 attggcagcg ccgatccggt cgagttcctg gaccgtgcgg tgaccttcgc caacgagcgg
     1021 ctgtggggaa cgctttccgc cggccttgtg gtccatccca agaccagcaa ggaccccacg
     1081 ctcggcgccg cggtggagcg ggccatcagc aagctgcgct acggctcggt caacgtgaac
     1141 gcctggtccg gctacacgtt cgccttcggg acgccgccct ggggcgctca tcccagctcg
     1201 accctgacgg acattcagag tggccgaggc tgggtgcaca acaccccgat gctggagggg
     1261 atcgaaaagg cggtgctgcg gcatccgatc accgcgatgc ccaaggcgtc gtatttcccc
     1321 actcaccgga gcgctcatct gctgatgcag cggatgacgg tgctggagga gaactcgagt
     1381 tggaccaggg tgccggcagt gctggctgcg gcgatgcggg cttgatcacc gagattggca
     1441 ctgggtgggt cccgacggct gagcgcgatg cgggcataac gagagtgaga gcggcactgg
     1501 gtcgagtccc tccggcttca agcgcctgac agccacccca ccccgtcccc ttgcgctcag
     1561 ccctcggaac tcgacccagc gccgctctca ctctcgttat gcccgcatcg cgctcagccg
     1621 tcgggaccct acccagtacc aatctcgctg gtcaagctcg cattgccgcc gccagcactg
     1681 ccggcaccct ggtccaactc gagttctcct ccagcgtcgt catcc
//
LOCUS       DASRPQ010002095         2487 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3714259, whole genome shotgun sequence.
ACCESSION   DASRPQ010002095 DASRPQ010000000
VERSION     DASRPQ010002095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2487
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3714259"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(415..1887)
                     /gene="ltrA"
                     /locus_tag="VFD73_23770"
     CDS             complement(415..1887)
                     /gene="ltrA"
                     /locus_tag="VFD73_23770"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: protein motif:HMM:TIGR04416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZI76996.1"
                     /translation="MPEDAPVNTGAVAWPSADSAYFAVREMQIKLHRWAGGDSSRRFG
                     DLFNLVYDPAFLVHAWERVSANKGARTPGVDKATVAMIESRVGVEAFLGQIRDLLKSG
                     EFGPVEVRQVTIPKASGKLRKLGIPTVADRVVQASLKAVLEPIFEADFQPCSYGFRPN
                     RRAQDAIAEIHHYGTSGYRWVLECDIKACFDEIDHTALMDRLRVRIKDKRVCALVKAF
                     LKSGVLTELGGREEALTGTPQGGILSPLLANIALSALDDHFSRQWHQEMGSDGQRRKR
                     RQNGQGNWKIIRYADDFVLMVHGERRHAEALREEVAAVLAPMGLRLAPEKTAVVHLDE
                     GFTFLGFDIRRMRKRGTQKYYVYTKPSKKAIQAIKDKVRTKTYRSTRHMGLDELIASL
                     NRSLAGWANYFRHGVSKAVFGDVDSHAWNRLMRWIRAKYKHGSHRIGMPELRRRFCDQ
                     GWRFACNGVVFTGASSVAVTRYRYRGSTIPAPWTPAPAPG"
BASE COUNT          396 a          893 c          716 g          482 t
ORIGIN      
        1 cagccacgtg tcgaacgcgt agtcgggtcg ccccggggaa tttcaccccg aggctcccac
       61 ggaacggaac gtgaccgtct ccagtcattc cgctcttctc atcctttcca tcggtatgcg
      121 cgcatccatg cccagtgcgc gaagagttcc ggctcccttg cggtgagccc tcgccaccag
      181 gctttgaacc gtttccaggt ggcagccgct tgtacttctt ccgagcccac cgcatcaagt
      241 aggtgttgat gcgttcgagc aggggataca tctcggatct gttaaactcg ccagttgggt
      301 cggaccaggg cgccctgccg ggattgctcc cggtgggttt ccccggcccg cccgccgcac
      361 ccgccgtgcg tgtctccacg caacgggcgc tccacgtgtc ttgcccgccg gtcatcagcc
      421 cggggctggt gccggtgtcc agggggccgg tatggtgctg ccgcggtagc ggtagcgggt
      481 caccgcgacg ctggacgcgc cggtgaacac gaccccgttg caggcgaacc gccatccctg
      541 gtcgcagaaa cggcggcgca gttccggcat cccgatccgg tggcttccgt gcttgtactt
      601 ggcgcgtatc cagcgcatca gccggttcca tgcatggctg tcgacgtcac cgaacacggc
      661 cttggacacc ccgtgccgga agtagttcgc ccaccccgcc agtgacctgt tcaagctggc
      721 aatcagctca tccaggccca tgtgacgggt tgacctgtac gtcttggtcc tcaccttgtc
      781 cttgatcgcc tggatggcct tcttagacgg cttggtgtag acgtagtact tctgcgttcc
      841 ccgtttccgc atcctgcgga tgtcgaagcc gaggaacgtg aagccctcat cgaggtggac
      901 cacggcggtt ttctccggtg ccagccgcag ccccatcggg gcgaggacgg ccgccacctc
      961 ctcccgcagc gcctcggcgt ggcggcgttc cccatgcacc atgaggacga aatcatccgc
     1021 atagcggatg attttccagt tgccctggcc gttttgcctg cgctttctcc gctgcccgtc
     1081 tgagcccatc tcctgatgcc attgccggct aaaatgatcg tccagcgccg acaaggcgat
     1141 gttagcgagc agcggcgaaa ggatcccgcc ctgaggtgtt ccggtcagtg cctcttccct
     1201 gcctccgagc tcggtgagga ccccggattt caggaatgcc ttcaccagcg cgcacacgcg
     1261 cttatccttg atcctcaccc ggaggcgatc catcaatgcc gtatgatcaa tttcgtcaaa
     1321 gcaggctttg atgtcacact ctagtaccca gcggtacccg ctggttccgt agtggtggat
     1381 ctcggcgatc gcgtcctgcg cgcgccggtt cgggcggaac ccgtacgagc acggctggaa
     1441 atccgcctcg aaaataggct caagaactgc cttcaggctc gcctggacca cgcgatccgc
     1501 gacggtggga atacctagct tgcgaagttt cccgctcgct ttaggtattg tcacctgccg
     1561 cacttcaacc ggcccgaact cacccgactt cagcaagtcc cggatctggc ccagaaatgc
     1621 ctccaccccg acccgggact cgatcatggc caccgtggcc ttatcgacac ccggggtcct
     1681 ggcgccctta ttggcagaca cgcgctccca cgcatgcacc agaaacgccg gatcatatac
     1741 gaggttgaac aggtcaccga accggcggga ggaatcccct cccgcccagc ggtgcaactt
     1801 gatctgcatc tcccgtaccg cgaagtaagc cgagtctgca ctcggccacg ccacggcgcc
     1861 ggtattcact ggcgcatctt cgggcattgc tttccctcct tgactgacac gctgccgccc
     1921 ttccccgtgt gccgggcttt ccccggcccg gagtactacg gcggctccgt cccgaccgcg
     1981 ccttcggcag gcgtcgcgcc tatccaccgc ccgctcccct ggccggggaa cggctgcgga
     2041 acgcacgcgg ccggttccca cgttcacctg ctgtgcggtc gacgggttag gcacccggct
     2101 ctgcccctgc ggcctcgcca tgactacgcc gcagacaatt cgccatggcc tcccgacccg
     2161 ggctactaag acccagccgg gagttccccg cccgtcatga agagcgggtg cgcgccgcta
     2221 accagcccgg atccgccggg ttagagctgg cggatgctca aggggcgtaa cagcaccggt
     2281 tcctcgcgta taccttcccg tcttgctcac cgcgcccggc ccatccggca gtgctgaacc
     2341 ggcgcgactt tgtcgaggct gctcccgccc tccccaccga cccgtggctc aggctgcctc
     2401 cagcttcacc ccgccgctac gacgacgagg agatggacgg tctttcacct ccatccgcac
     2461 cagcagcgcc tcgtggcgca ctagtag
//
LOCUS       DASRPQ010002096         1113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1837146, whole genome shotgun sequence.
ACCESSION   DASRPQ010002096 DASRPQ010000000
VERSION     DASRPQ010002096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1837146"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            269..694
                     /locus_tag="VFD73_23775"
     CDS             269..694
                     /locus_tag="VFD73_23775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI76997.1"
                     /translation="MTAAAFPARIGHADRKPGYEQLRTWIVAQSVRNALQAFHGRWAF
                     DPDNPGSGEGFISDGQMRALNITIRRAVHEALRQADKARNVAAQPYRRELYPAEQEAL
                     DFCEFQLGTIRDYMEPPGSPSLEEAYKLYVSEPDVNRCS"
BASE COUNT          214 a          382 c          338 g          179 t
ORIGIN      
        1 gggccgccgg ccatctgctt cagcagatag tcagctttcc tgcagtaaac aatctgtttg
       61 actgcagctg ggttacaggc agcggtcagg ttcaccggta attatctgac tggctccctc
      121 cggtgccacg ccccgtatgg cgccgggaat gcgcccgagt gcgccccgcc ggagcccccg
      181 gattcccgtg tccggcgggg tgcctcgcca ggctgctgag gggccaggca gcgcgccggg
      241 gctccttgcc cggagaaacg agcgcatcgt gacagccgcc gccttcccgg cccggatcgg
      301 gcacgccgac cgcaagcccg gctacgagca gctccggacc tggatcgtgg cgcagtcggt
      361 ccgtaacgcg ctgcaggcgt tccacggccg ctgggcgttc gacccggata acccgggcag
      421 cggggaaggg ttcatcagcg acgggcagat gcgcgcgctg aacatcacca tccggcgcgc
      481 cgtgcacgag gcactgcgcc aggcggacaa agcccgcaac gtcgcggcgc agccgtaccg
      541 ccgggagctg taccccgcag agcaagaagc gctggacttc tgcgagttcc agctcgggac
      601 gatccgtgac tacatggagc cgcccggctc gcccagcctc gaagaggcct acaagctcta
      661 cgtcagcgag ccggacgtca accggtgctc atgagcaaag cgcacagtcc cgctgtctgg
      721 cataccaaga acggcggtcg tccagctgat cccggccatc aataacggat aatctgcgcg
      781 ctcaaacgca gccgctccgc caattaacct tacgttcgta tccggcgatc agggttcctg
      841 cgaaaacgac ggaaagactc cacggcgatc gtcagcaagg tcaaggcgtg tgggtgagca
      901 ttccagccca cccatatata tccgtgcgga tgaagtactc acatcggcat gagcggacgt
      961 ctctgccgag gtaacgacac acgtgccacc tcagatcgac ctattctgcg cgcgtcggac
     1021 agttgacctc ctccccgcac gatcacacct aataaggcgg ctcagcgcgc gttctcctcg
     1081 gtcgcccttg tcactccgcg tgataccaag aca
//
LOCUS       DASRPQ010002097         3390 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3059334, whole genome shotgun sequence.
ACCESSION   DASRPQ010002097 DASRPQ010000000
VERSION     DASRPQ010002097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3390
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3059334"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..590
                     /locus_tag="VFD73_23780"
     CDS             <1..590
                     /locus_tag="VFD73_23780"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HZI76998.1"
                     /translation="VQVPLGEDAPLAGIPDLALRRERAPNLAAAELLGYQADWSVASR
                     ELTTAGLVIVLDADLNEAEQASIASAPGTLVVLGTVFPEGLRNAELVLPITNMAEENG
                     TYVNRDQRIQRFNQAKSQPGMARPAWWVAGEVLAGPGPSPSAPSTAAEAFELLGERWP
                     AFAGLSHADLGYTGRILGLSADRNAESQNADMGVV"
     gene            599..1831
                     /gene="nuoH"
                     /locus_tag="VFD73_23785"
     CDS             599..1831
                     /gene="nuoH"
                     /locus_tag="VFD73_23785"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HZI76999.1"
                     /translation="MKGYLLLSIIKMLVVFTVIMVGVALLTLMERKVSAWMQNRRGPN
                     RVGPAGLLQPAADGLKNILKEETFPALASRWLFLLAPAMSFIPALLLFAVIPFGAPVP
                     VNFDFTLGPLGRFVHHGLMPMVVADLPIGFLFVLAISSMGVYGIALAGWSSNSKYALL
                     GGLRAAAQMVSYEVPMGLSLIPVLLLTGNVSLSAIVHDQQLGLWFVLPLFLSFFIFLI
                     SGFAETNRLPFDLPEAESELIAGYHTEYSAMKFSFFFIAEYANVVTVCAMVTTLFFGG
                     WDIPLTHWDETGGVLQTVATSGLFFLKVMFWIFFVMWIRWTLPRFRYDQLMALGWKVL
                     LPLALGYIMLICVAIYVIERVLGFTDPVLKGLSLFALNIVVGILVFGLLDRGVFVRGS
                     ARQRRALNAPARRAPVVT"
     gene            1852..2355
                     /locus_tag="VFD73_23790"
     CDS             1852..2355
                     /locus_tag="VFD73_23790"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit I"
                     /protein_id="HZI77000.1"
                     /translation="MPRPTREVSYVRATLKGMALTFKHMFEKKVTMQYPEEKSTDAEH
                     GGGQWSLSSRWRGTHRMLTDEQGRSKCVACGLCPQICPANCIKLVPGEDEQGNRYPLI
                     YEIDEFRCIFCGYCQEVCPEEAIHVGVHYENSEYSRGRFVYDLERLSSQTHAVSTLWD
                     PIDPKGE"
     gene            2356..2913
                     /locus_tag="VFD73_23795"
     CDS             2356..2913
                     /locus_tag="VFD73_23795"
                     /inference="COORDINATES: protein motif:HMM:NF012709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HZI77001.1"
                     /translation="MTEVIFYIFAAFAVLSAALCILQKNPVSAALWLVSTMFSLAAIY
                     VLLNAQFIAAIQVLVYAGAVMVLFLFVIMLLNLGQTQSDIRGPSSIAATLVIVGLLAI
                     ELVALLRYTPRRLASELSQWPTFTDPATVFVAGQITQQETASKGVVGAVAAPLFQTYL
                     IPFEITSILLLAAIIGAVVLAKRNV"
     gene            2913..3209
                     /gene="nuoK"
                     /locus_tag="VFD73_23800"
     CDS             2913..3209
                     /gene="nuoK"
                     /locus_tag="VFD73_23800"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HZI77002.1"
                     /translation="MLLGPALGLSAILFSLGVAGVLVRRNAIVLFMCIELMLNAVNLS
                     FVALAQLHGASGYVIVFFVMTVAAAEAAVGLAIIIGIFRHQQTVDLQNINLLRG"
     gene            3209..>3390
                     /locus_tag="VFD73_23805"
     CDS             3209..>3390
                     /locus_tag="VFD73_23805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77003.1"
                     /translation="MISPHWVWLTVALPLFGFLANGALALGRPVNRRLVSIIGVGVLT
                     AAFLVSLGIFLQLWRQP"
BASE COUNT          524 a         1039 c         1081 g          746 t
ORIGIN      
        1 tggtgcaggt gcctctcggg gaagacgctc cgctcgccgg catcccggat ctggcgctcc
       61 ggcgggagcg cgcgcccaat ctggcagcgg ccgaactgtt gggataccag gccgactgga
      121 gcgtggcctc gcgagagctc accaccgccg gcctggtgat cgtactggat gccgacctga
      181 acgaggcaga acaggcgagt atcgcgagcg caccaggaac attggtcgta ctgggaacgg
      241 tattccccga gggattgcgt aacgccgagc tggttctgcc gatcacgaac atggcggaag
      301 agaacggtac ctacgtcaac cgagaccagc ggatccagcg cttcaatcag gcgaaatcgc
      361 agccgggaat ggcccgcccc gcctggtggg ttgcgggtga ggtcctggcg ggcccaggtc
      421 ctagtccttc cgcaccctcc acggcggcgg aggcatttga gcttctcggc gagcggtggc
      481 cggcgtttgc cgggctgagc catgccgacc tgggatatac cgggcgaatt ctcggactat
      541 cggctgaccg taacgccgaa agtcaaaacg ccgatatggg cgtcgtatga cacccgagat
      601 gaagggttat ctgctcctca gcatcatcaa gatgctggtg gtgtttaccg tcatcatggt
      661 gggcgtggcg ctgctgacgc tgatggagcg gaaggtcagc gcctggatgc agaaccgaag
      721 aggtcccaac cgggtcggac cggcgggttt gctgcagccc gccgccgatg gtctcaagaa
      781 tattctgaag gaagagacct tcccggcgtt ggccagccgg tggctctttc tgctggcgcc
      841 ggcgatgtcc ttcatccccg cgctgctctt gttcgcggtc atcccattcg gcgcgccggt
      901 accggtcaat ttcgacttta cgctggggcc gctcggccgc ttcgtccatc acgggctcat
      961 gcccatggtg gtggccgacc tgccgattgg atttctcttc gtgctggcga tcagctcgat
     1021 gggggtgtac ggcatagcgc tcgccggctg gtcgtccaac agcaagtacg ctctcttggg
     1081 cgggctccgg gccgccgcgc agatggtgtc ctatgaggtg ccgatggggc tgagcctcat
     1141 tccggtgctg ctcttgaccg ggaacgtgag cctgtcggcc atcgtccacg atcagcagct
     1201 cgggctctgg tttgtcctcc ccctctttct ctccttcttc attttcctga tctcggggtt
     1261 tgccgagacc aaccgcttac cgttcgacct tccggaggcg gagtcggagc tgatcgccgg
     1321 ctatcacacc gagtacagcg cgatgaagtt ctccttcttc ttcatcgccg agtacgccaa
     1381 cgtggtgacg gtctgtgcga tggtgacgac gctgttcttt ggtgggtggg acatcccgtt
     1441 aacccactgg gatgagaccg gcggagtgct gcagacggtg gccacgtccg gactgttctt
     1501 tctcaaggtg atgttctgga tcttcttcgt catgtggatc cgctggacgt tgccccgctt
     1561 ccgctacgat cagctcatgg cgctgggatg gaaggtgctc ctgcccctgg cgctcgggta
     1621 catcatgctg atctgcgtgg ccatttacgt gatcgagcga gtgctcggct ttaccgaccc
     1681 cgttctgaaa gggctcagct tgttcgcgtt gaatatcgtg gtcggcattc tggtctttgg
     1741 cctgttggac cgcggggtgt tcgtgcgcgg ttcggcgaga cagcggcggg cgctcaatgc
     1801 cccggcgcgt cgcgctccgg tggtgacctg atgccgattg gtgtaaaggt cttgcctcgg
     1861 ccgacgcggg aggtcagcta cgtccgggcc actctcaagg ggatggcgct caccttcaag
     1921 cacatgttcg agaagaaggt gacgatgcag tacccggagg agaagagcac cgacgcggag
     1981 cacggaggcg gccagtggag cctctcgtcg cgctggcgcg gcacccaccg gatgctgacc
     2041 gacgagcagg ggcggtccaa gtgcgtggcc tgcgggctct gcccccagat ctgtcccgcc
     2101 aactgcatca agctggtacc gggcgaggat gagcagggca accgctatcc cctcatctat
     2161 gagatcgatg agttccgctg catcttctgc ggctactgcc aggaggtctg tccggaagag
     2221 gcgatccacg tcggggtgca ctacgagaat tcggagtata gccgaggccg ctttgtctac
     2281 gacctcgagc ggctctcctc ccagacccat gccgtgtcga cgctctggga cccgatcgat
     2341 cccaagggtg agtagatgac cgaggtgatc ttctacatct ttgcggcgtt tgcggtgctt
     2401 tccgccgcat tgtgcattct ccagaagaat ccggtctcgg cggcgctgtg gctggtctcg
     2461 accatgttct cgctggccgc catctacgtg ctgctcaatg cccagttcat cgccgccatc
     2521 caggtcctgg tctacgccgg ggcggtcatg gtgctctttc tcttcgtcat catgctgctg
     2581 aatttggggc aaacccagtc cgacatccgc ggcccctcct ccattgcggc gacgctggtc
     2641 attgtgggac ttctcgccat cgagctggtt gccttgctcc gctacacgcc ccgacggctg
     2701 gcgtcggagc tgtctcagtg gcccacgttc accgatccgg caacagtgtt cgtcgccggg
     2761 cagatcaccc agcaggagac cgccagcaag ggtgtggttg gcgcggtggc ggcaccgctg
     2821 ttccagacct acctcattcc ctttgagatc acctccatcc tgctcctggc tgccatcatc
     2881 ggtgccgtgg tgctggctaa gcggaacgtc taatgctgct cggcccggcg ctcggtctgt
     2941 cggcgattct tttcagtcta ggcgtggcgg gagttctggt tcgccgtaac gcgatcgtgc
     3001 tgttcatgtg catcgagctg atgctcaatg cagtgaacct gagcttcgtg gcgctggccc
     3061 agcttcatgg cgcgagcggc tacgtcatcg tgtttttcgt gatgaccgtt gccgcggccg
     3121 aagcggcggt tggactcgcg atcatcatcg gcatctttcg tcaccagcag acggtcgacc
     3181 ttcagaacat caacttgctg cgaggctgat gatctcccct cattgggtct ggcttaccgt
     3241 cgcgctcccg ctgttcggct tcctggcgaa tggcgccttg gcgctcggga ggccggtcaa
     3301 tcggcgactg gtctcgatca tcggggtcgg agtgctcacc gctgccttcc tggtctcgct
     3361 gggcattttc ctgcaactct ggcgacagcc
//
LOCUS       DASRPQ010002098         1037 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4637381, whole genome shotgun sequence.
ACCESSION   DASRPQ010002098 DASRPQ010000000
VERSION     DASRPQ010002098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4637381"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..594
                     /locus_tag="VFD73_23810"
     CDS             133..594
                     /locus_tag="VFD73_23810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77004.1"
                     /translation="MGQAEGPLGEDERALLELLPADGSEAASEGILARLGWDAERYAR
                     ACVRLEQRGYVQAGQGRAETVYRDLTAVPPEFRPACGRPGSRVTVRQVPVTVPHALCD
                     LTGVTLAYPGHGGAVVPSSGKGVVNSKGCQIEVDAQTLDVTITVSGLRHNA"
BASE COUNT          191 a          323 c          346 g          177 t
ORIGIN      
        1 cggctggtca attgggacat ggcgctacgg cacggagttg cttgaaccag ccgcaggaca
       61 cacctgggca tcacgcgata cagcacgaaa tacagcaacc tgaccggcca atgatcagct
      121 agtttgtagt tcatgggaca ggccgaaggt ccgcttggcg aggacgagcg ggctctgctc
      181 gagctgctgc cggcagatgg gagcgaggcg gccagcgagg ggatcctggc ccggctcggc
      241 tgggatgccg agcgctatgc ccgtgcctgt gtccggctgg agcagcgagg atatgtgcag
      301 gccgggcagg gccgcgctga gaccgtttac cgggatctga cagcggtacc gccggagttc
      361 cgccccgcct gcggaaggcc cggctctcgt gtcacggtgc gccaggtgcc cgtcacggtc
      421 ccgcacgccc tatgcgacct gaccggcgtc acgcttgcat atcccggcca cggtggcgcc
      481 gttgtcccat cttcaggcaa gggagtcgtc aacagcaagg gctgtcagat cgaggtcgat
      541 gctcagacgc ttgacgtcac gatcaccgta tctggccttc gacataacgc gtgacctgct
      601 cgccaagggt ggcggagttg atgattaagt gtcaaccacg cacaacggca gcaacaaacg
      661 gcagcaaccg cactgcccac agatgaccgc caccagccac catcagcctt acgacctgcg
      721 cagatgtcct cgggcaggca gttgcgctgt attgcgcatc cctcggctgt ctctcggcag
      781 ccaagggcca gtcaaggcct gttcgcgctg tactctggcg gtgcgcgtac cagcgtgcga
      841 tgcccgccag gtccctggac cggcggggcg tcgtcttgat agacgagttt tccatgaggg
      901 ctgaccgcct ggcggatccg gtgacgcagg ccgctgggaa ctacatggcg tgcttcgagc
      961 gggtatggga atccgcgaag ccctggtacg gcgaggagac ctgaatgggc cgcaccgagt
     1021 actggaatga tccggcc
//
LOCUS       DASRPQ010002099         1152 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1517640, whole genome shotgun sequence.
ACCESSION   DASRPQ010002099 DASRPQ010000000
VERSION     DASRPQ010002099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1152
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1517640"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..213)
                     /locus_tag="VFD73_23815"
     CDS             complement(<1..213)
                     /locus_tag="VFD73_23815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HZI77005.1"
                     /translation="MKASVFIATSLDGFIARRDGRLDWLPQDGGEPHGYDEFIATVDA
                     IVIGRNTFETVLTFDAWPYETKPVIVL"
     gene            complement(285..650)
                     /locus_tag="VFD73_23820"
     CDS             complement(285..650)
                     /locus_tag="VFD73_23820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77006.1"
                     /translation="MSNPSEPVDLAAEIAFLERRQRLLPALAALALASLVAAATGFAR
                     HGPGVIQAERIELVDAQGATRAALGTDTAGVSLTVYDKRGRVTASLRLNGEPRLTVRD
                     AGGREVAALGAPRVQHLVQ"
     gene            complement(760..>1152)
                     /locus_tag="VFD73_23825"
     CDS             complement(760..>1152)
                     /locus_tag="VFD73_23825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77007.1"
                     /translation="EGDSIWLYLTEPGTTAIAADCWLFNRVIAPSVAVLKEQLPAYRS
                     RGLPPPAPADVTSERGVRQGPLQALDLRLEWSREGDAVAAREGDDVIGFIIMEQRRGF
                     SRFLVRESPWGAPFDDELYERSFAPERG"
BASE COUNT          207 a          390 c          358 g          197 t
ORIGIN      
        1 gagaacgatt accggcttgg tctcataggg ccaggcatcg aaggtgagca ccgtctcaaa
       61 agtattccgc ccgatcacga tcgcgtccac cgtggcgatg aactcgtcgt atccatgggg
      121 ctcaccccca tcctggggga gccagtccag tcgcccgtcc ctgcgggcga tgaagccgtc
      181 gaggctcgta gcgatgaata ccgatgcctt catgtgagtc tcaaggtgga ttgctccaat
      241 gcttggtggt gctgcctgac gttctccggc cttcatgatg gttcttactg cacgagatgc
      301 tggacgcggg gcgctccgag cgcagccacc tcgcgcccgc ccgcgtcccg aaccgtcagg
      361 cgcggctcac cgttcagccg aagcgacgcg gtgacccggc cccgcttgtc gtacaccgta
      421 aggctgacac ctgcggtgtc ggtgcccaag gctgcccgag ttgctccctg cgcgtcgacc
      481 agttcaatac gctccgcctg gatcacgcct ggcccgtgac gggcaaagcc tgtagcggcc
      541 gcgaccagag aggccagtgc taatgcggcc agcgctggta gcaagcgttg gcggcgctcg
      601 aggaaggcga tctcggccgc taaatccaca ggttcagagg gattcgacat aagtactctc
      661 cagatgcgaa ggcggactga ggtgatgtct cgctcagcag tccttgcaca cgccctggat
      721 ccgcgatgcg cgggacgcgc ctgacgactt gctcaggcct caaccccgtt ccggggcgaa
      781 cgaccgctcg tacaactcgt catcgaaggg tgcgccccac ggactctcgc gcaccaggaa
      841 ccggctgaag ccacggcgct gctccatgat gatgaacccg atcacgtcgt caccttccct
      901 ggccgccacg gcgtcgccct cccgcgacca ctcgagccgg aggtccagag cctggagtgg
      961 tccctgccgg acgccacgct ccgatgtcac gtccgccggc gcgggtgggg gcagtccgcg
     1021 actccgatag gccggaagct gttccttcag cacggcaacc gagggggcga tgacgcgatt
     1081 gaacagccag caatcagccg caatcgccgt agtcccgggc tccgtgaggt acagccagat
     1141 ggaatcaccc tc
//
LOCUS       DASRPQ010002100         1191 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2149992, whole genome shotgun sequence.
ACCESSION   DASRPQ010002100 DASRPQ010000000
VERSION     DASRPQ010002100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2149992"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            118..>1191
                     /locus_tag="VFD73_23830"
     CDS             118..>1191
                     /locus_tag="VFD73_23830"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HZI77008.1"
                     /translation="MTDNLPIYEIEQEIVARLKDRPRLVLQAPTGSGKSTQVPQILLK
                     HGLLQDGQVVVLQPRRLAARLLGARVAQERGVELGTEVGYQIRFDRVAGPNTRIKYVT
                     EGVLLRQMLQDPELRGVQAIILDEFHERHLYGDITLARAVELQQKTRPDLLILVMSAT
                     LPAGLLDKYLEPCHVLTSEGRTHPVEVDYQPPKPGGEEPSVWDQAAEAFRKHVQGGGT
                     GDVLVFMPGSYEIQQTVEAIRQTPESKGYILLPLHGELPPRDQDAAVARYEQPKVVVS
                     TNVAETSLTIDGIRLVIDSGLARIPRHDPGRGINTLLVEKISRASADQRTGRAGRTAP
                     GRCIRLWSSKEHWERPEHELPEVK"
BASE COUNT          245 a          376 c          348 g          222 t
ORIGIN      
        1 gaagtcccag cgggcgaacg taggggccaa ccctcagccg gcgtgcggat gggccagggc
       61 tttcgatctg actttgcgtt ctgaccggat tagtgctttg gttgaactag cttttgcatg
      121 acagacaatt tacccattta cgaaatcgaa caggagatcg tcgcgcggct caaagacagg
      181 ccgcgcttag tccttcaggc ccccaccggc tccggcaaat ccacccaggt cccgcaaatc
      241 ctactcaaac acgggctctt gcaggatggc caggtggtcg tgctccaacc acgccggctt
      301 gccgcccggc tcctcggcgc ccgcgtcgcc caggaacgtg gcgttgaact cggcacggag
      361 gtgggatacc agattcgctt tgaccgtgtg gctgggccca acacccgaat caagtacgtc
      421 actgagggag ttttgctccg tcagatgctc caggaccccg aattgcgagg ggtgcaagcg
      481 atcattctgg atgaattcca cgagcgccat ctctatgggg acatcaccct ggcccgggcg
      541 gtggaactgc agcagaaaac tcggcccgat ctgcttatcc tggtcatgtc cgccacgctg
      601 ccagccggtc tgctcgacaa gtacctcgag ccttgtcacg tcctcacgtc cgaaggccgg
      661 actcacccgg tcgaggtcga ttatcagcca cccaaacctg gcggagaaga gccgtcggtc
      721 tgggaccagg ctgccgaagc gttccgaaag catgttcaag gcggtggcac cggtgatgtg
      781 ctggtcttta tgcccggcag ctacgaaatc caacagacgg tggaagccat tcgccaaaca
      841 cccgaatcga aggggtacat tttactgccg ttacacggcg aactgcctcc gcgcgaccag
      901 gatgccgctg tggcacgata cgaacagccc aaagtcgtcg tctcgaccaa tgtcgcggaa
      961 acttccctga ccattgatgg catccgcctg gtgatcgata gcggcctggc ccgaatccca
     1021 cgccatgacc ctggccgggg catcaacact ctcctggtgg aaaaaatcag ccgcgcctcg
     1081 gctgatcaac gcaccggccg ggctggccgg actgcccccg ggcgttgcat ccggctttgg
     1141 tcgtcgaagg aacattggga acgacctgaa catgagctgc cggaggtcaa g
//
LOCUS       DASRPQ010002101         1918 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3715350, whole genome shotgun sequence.
ACCESSION   DASRPQ010002101 DASRPQ010000000
VERSION     DASRPQ010002101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1918
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3715350"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VFD73_23835"
     CDS             <1..184
                     /locus_tag="VFD73_23835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77009.1"
                     /translation="SRTSVNYKSDLDKPRAEALAEIVRAEGVATARVERSGDGDGDPG
                     TVQIFFGRDAEEAVKE"
     gene            812..>1918
                     /locus_tag="VFD73_23840"
     CDS             812..>1918
                     /locus_tag="VFD73_23840"
                     /inference="COORDINATES: protein motif:HMM:NF033590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZI77010.1"
                     /translation="MDLRSGKEEAENWAAVEMLGANFGDERLNRRVALLLKPLADRPA
                     ESLPSALQGWGDTMAAYRFFNNEKVTADKVLEPHRDATLERAKQFPVVLCVNDTSELD
                     YTGKQILGLGPMTYESALGLYIHPTLAVTPERLCLGVLDQWNWARDPNEHGGKHRQHR
                     LKRSIEDKESFRWVEGYRRVCDWQSTLPDTRLVYVADRDSDLFELFEEGQTGEADWLI
                     RASQDRALVGGGHLWQTLREAEVLGTTEFDLPATPQRAQRRVVQSLRAARVQLRPPYR
                     PDRKLPVVEVTAILASEQEPPEGVEPVEWLLLTNLPVTCAEEAEQKVQWYVCRWQIEI
                     YFRILKSGCKVEQLQLQERDRLEVALALYMIVAWR"
BASE COUNT          379 a          562 c          636 g          341 t
ORIGIN      
        1 gagccggacg agcgtcaact acaagagcga cctggacaag ccccgggccg aggcgctggc
       61 cgagatcgtg cgcgccgagg gcgtggcgac cgcccgcgtc gagcgcagcg gagacggcga
      121 cggggatccg ggcaccgtgc agatcttctt cggcagagat gccgaggaag ccgtgaagga
      181 gtaggaccgg cttgtggggt ccgcgctgga gagggacgcc cctcccgtcc cgaaaacgcc
      241 tgaaccctga gctgcgggct acaaccgccg cgcgaagcgc tcgtgtcttg cacgagcggc
      301 tcgcgcacga gaaaaacggc tcgcgccatg catgagcgct tcgcgcacag cgcgagcctc
      361 tcgcgcaatg cacgagcgcc tcgcgcacaa ggttttgaaa tttttgctga gcgcgagcca
      421 ctcgcgcaca agaaaaacgg ctcgtgcaca gtccgagccg ctcatgcaca agaaaactgg
      481 ctcgcgcaca gccggaacac ctttcgccaa cgccagccac gaagtggcgg cagcgtgtcg
      541 ccccgggcgc cagcccggag gccctccccc tgctgcgggg cttgcgcccc tcgcccgttc
      601 cgtcacccct tcggggcttg gggaatctgt tgtctccgat accccgggct ggcgcccacc
      661 ctcttaaata catctcccat tcagccccaa aaggggcgaa ggcataaagc ctggggtttc
      721 aacccaccct cttatacaca acttgtacta gacaagcggg tctttgtctg ctctcctgtt
      781 ccatagacga ggaacctaga ggagggcaga gatggatctt cgctcaggta aggaggaggc
      841 ggagaactgg gccgccgtgg agatgctggg tgccaatttc ggggatgagc ggctgaatcg
      901 gcgtgtggct ctattgctca agccgttggc cgatcggcct gcggagagcc taccttcagc
      961 gcttcagggc tggggggata cgatggcggc ctaccgcttc ttcaacaatg agaaggtcac
     1021 tgctgacaag gtcttggagc cccatcgaga cgcgaccctc gagagagcca agcagtttcc
     1081 cgtggtgctg tgtgtcaatg acacgagcga gttggactac accggcaagc agatccttgg
     1141 gttgggtcca atgacctacg aatcagcctt ggggttgtac atccatccga cgctggcggt
     1201 gactccagaa cggctttgtc ttggggtgct ggaccagtgg aactgggcgc gagaccccaa
     1261 cgagcacggc ggcaagcatc gccagcaccg tctgaagcgg tccattgaag acaaggagag
     1321 ctttcgctgg gtagaagggt atcgccgagt ttgtgattgg cagagcactc tgcccgacac
     1381 tcgcctggtc tatgtggcgg atcgggattc ggatctgttc gagctgtttg aagaagggca
     1441 aaccggggag gctgattggc tgatccgagc gagccaggac cgcgctctag tgggaggtgg
     1501 ccacctctgg cagacgttga gggaggccga ggttctgggg accaccgaat tcgacttgcc
     1561 ggccacgccc cagcgtgctc agcggcgagt ggttcagagc ctgagagcgg cccgtgtcca
     1621 actcagaccc ccttatcgcc ccgaccgaaa gctgccggta gtagaagtga ccgcgattct
     1681 ggcttcggag caagaaccac cggaaggcgt cgagcctgtg gaatggctgc tgctgacgaa
     1741 tctaccggtg acctgtgctg aggaggccga gcagaaggtg cagtggtatg tctgccggtg
     1801 gcagatcgag atctactttc gcatcctcaa gagcgggtgc aaggtcgagc agttgcaact
     1861 gcaggagcgt gaccgcttgg aggtggctct ggcgttgtac atgatcgtgg cttggcgg
//
LOCUS       DASRPQ010002102         1083 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_870220, whole genome shotgun sequence.
ACCESSION   DASRPQ010002102 DASRPQ010000000
VERSION     DASRPQ010002102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_870220"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..571
                     /locus_tag="VFD73_23845"
     CDS             <1..571
                     /locus_tag="VFD73_23845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77011.1"
                     /translation="AEAAGHTSYRSTWMCVTDGGHYDNLGLVEALQRAPELGITHILV
                     LDASGDKADTWFTLGGSIALARSDAGTDIALNPTQMTTSLESGTAQLVQGQVVQPWAS
                     GTFTGQDPDQDKTILVCKLGWWASAPWDVRAYAAGHPAYPTDSTLEQLYDSAEFDAYR
                     ELGAAAVKLALEESRLSPTSPSRRPASAG"
     gene            complement(699..>1083)
                     /locus_tag="VFD73_23850"
     CDS             complement(699..>1083)
                     /locus_tag="VFD73_23850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI77012.1"
                     /translation="RLGWWRPDPTYRQIFVSRFLPEATQEQWRSFDELQQRSTSPDNA
                     WRFVDAFANIDVTNLAPKLTVPTLIMCSRREPDNRFEQSRLLAGLIPKSRLVPLDSSN
                     HLLPERDPAWRHFLAEIDRFLPSPQ"
BASE COUNT          218 a          342 c          345 g          178 t
ORIGIN      
        1 cgccgaagcc gccgggcaca ctagctatcg cagcacatgg atgtgcgtca ccgacggagg
       61 gcactacgac aacctgggcc tggtcgaagc cctgcaacgg gcaccggaac tgggcattac
      121 ccacatcctg gtcctcgacg ccagcggcga caaagcggac acctggttca ccctcggcgg
      181 gtccatcgcg ctggccagat ccgatgcggg aaccgatata gcgctcaacc ccacgcagat
      241 gaccacttct ctcgagagcg gaacagcgca acttgtccag gggcaagtgg tacaaccgtg
      301 ggctagcggc acgttcaccg gccaggaccc ggatcaggac aagacgatcc tggtgtgcaa
      361 actcggctgg tgggccagcg cgccgtggga tgtacgcgcc tacgcggcag gtcatccggc
      421 ctacccgaca gactctaccc tcgaacagct ttacgatagc gcggaattcg acgcctaccg
      481 agagctggga gccgccgcag tcaagctggc gctggaagag agccgcctat ccccaacctc
      541 tccctccaga aggccggcat cggccggatg agcttcagcg accaggaatc acgccctcag
      601 agttcgtgga ctgtgaactc accactcgct gcgtcaccgt tggacacggg cgcctgcgcc
      661 agccatcagc gcctctacct cggtgagact gggtcggctc attgggggct gggcaggaac
      721 cggtcgatct cggctaggaa gtgccgccaa gcgggatcgc gctcaggcag taggtggttg
      781 ctgctgtcga gtggaaccag acgacttttc gggatcagcc cagccagcaa ccttgactgc
      841 tcaaagcgat tgtcgggttc ccggcgtgag cacatgatca gcgtgggcac ggtgagctta
      901 ggtgcgaggt tcgtgacgtc gatgttggcg aacgcgtcga cgaatcgcca tgcgttatcc
      961 ggggacgtcg accgctgctg aagctcgtcg aaacttcgcc attgctcctg ggtggcttcg
     1021 ggcaggaagc gggatacgaa gatctgccga taagtcggat ccggacgcca ccagcccaag
     1081 cgg
//
LOCUS       DASRPQ010002103         1582 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4007162, whole genome shotgun sequence.
ACCESSION   DASRPQ010002103 DASRPQ010000000
VERSION     DASRPQ010002103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4007162"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..573)
                     /locus_tag="VFD73_23855"
     CDS             complement(<1..573)
                     /locus_tag="VFD73_23855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77013.1"
                     /translation="MAEPKAAKAGTKSEGKPRRRKKAAAEPRSRGIPPDAIGSGAHPA
                     ELTRLAEAIQADGGTVLAPYKDPLGGHWQLFAALPIDLVEPTPYQRDLSKPHVERLSG
                     AMDRLGRYLDPMIVVRGESPGGSENSRAAHPYWTPNGNHRLAALKRLGARSVVAIVVP
                     DMEVAHRILLLNTEKAHNLRERSLEVIRLAE"
     gene            complement(652..>1582)
                     /locus_tag="VFD73_23860"
     CDS             complement(652..>1582)
                     /locus_tag="VFD73_23860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77014.1"
                     /translation="EQVGAVRTAAATIWGPPPSDSAMLAAMKTQAFWIIEAAFSSYQS
                     KSATSDSVIRAFTRPQDVSPRVPALLSRGLSVRAQVLAGTGRWKEAQLLLDSLRAVDP
                     EKARGSMAWAVVLALAPRSQAPALDSAVDAMSPGPEAEYARAMVDILRGKVGDGRRML
                     GRALENRDSAAIPQPIRGLMMAGDGWAQLLQGDSAGGIRRMRAGIDLSAAPNEETAFP
                     RLQLALSLAARRDTRAEGIRWLSYSFDMLPLYKPLTLLALGHTYEAAGQTDSATQAYT
                     RFLKLWDRADPGLQGRVNEAKAALQELTRERPQ"
BASE COUNT          260 a          520 c          518 g          284 t
ORIGIN      
        1 ctcggcgagt cgaatgacct ccagcgagcg ctcgcgcaga ttgtgcgcct tctcggtgtt
       61 gagcagcaga atccggtgag ccacctccat gtccggtacc acgatggcca caaccgacct
      121 ggcgcccagg cgcttgaggg cggcgagccg gtggttgccg ttcggcgtcc agtaggggtg
      181 agccgcccgg ctgttttccg agccacccgg agactcgccg cggaccacga tcatgggatc
      241 caggtaccgg ccgagccgat ccatggcacc ggagagtcgc tctacgtggg gcttggagag
      301 atcgcgctga tacggcgtgg gctcgaccag atcgatggga agagcggcaa agagctgcca
      361 gtgaccgccg agcggatcct tatagggcgc gaggacggtg ccgccatcgg cctgaattgc
      421 ctccgccagt cgcgtcagct cggcgggatg ggcaccggag ccgatcgcgt cgggagggat
      481 tccgcgcgag cgcggctccg cggccgcctt ctttctgcgg cgaggtttcc cttccgactt
      541 ggttccagcc ttagctgcct tcggctcggc cactgagtct gctactccga ggaatgttcg
      601 agggtatgta actccgcttc ccgggacacg gaagactccc ggtcgatgcc gctactgggg
      661 tcgctcccga gtgagctcct ggagcgctgc tttcgcttcg ttcacccttc cctgcagccc
      721 gggatcggct ctgtcccaca gcttgagaaa ccgggtgtag gcctgggttg cggaatcggt
      781 ttgcccggct gcctcatagg tatggccaag ggccagcaaa gtcagcggtt tgtagagagg
      841 cagcatatcg aagctgtaac tgagccaccg aatcccttca gccctggtat cgcgacgggc
      901 agcgagactc aacgccaact gcagccgggg aaacgcagtc tcctcgttgg gtgcggccga
      961 taggtcgatg ccggctcgca tccggcggat cccaccggct gagtcgccct ggagcaactg
     1021 cgcccagccg tcacctgcca tcatgagccc ccggatcggc tgaggaatcg ctgccgagtc
     1081 cctgttttca agcgcccggc ccagcattcg gcgaccgtct ccgaccttac ctcgtaggat
     1141 atcgaccatg gctcgggcgt actccgcttc ggggccgggg gacattgcat cgaccgccga
     1201 atcgagtgcc ggcgcttggg agcgaggcgc cagcgccaag accacagccc atgccatgct
     1261 gccccgggcc ttctctggat ccaccgccct cagcgagtcc agtagcagtt gtgcctcctt
     1321 ccatcgtccg gtcccggcga ggacctgcgc gcgtaccgac aggccgcgtg agagcagggc
     1381 cggaacgcgg ggtgagacgt cttgaggtct ggtgaacgcc cggatcaccg aatcggaggt
     1441 ggcactcttc gactggtagc tcgagaacgc ggcctcgatg atccagaacg cctgcgtttt
     1501 catggcagca agcatggcgc tgtcgcttgg cgggggaccc caaatcgtgg cggcagccgt
     1561 tcgcaccgca cccacctgct cc
//
LOCUS       DASRPQ010002104         1364 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4638488, whole genome shotgun sequence.
ACCESSION   DASRPQ010002104 DASRPQ010000000
VERSION     DASRPQ010002104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1364
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4638488"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            248..508
                     /locus_tag="VFD73_23865"
     CDS             248..508
                     /locus_tag="VFD73_23865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77015.1"
                     /translation="MRTTIDMPDVLMRAAKARAAEHGESLKDLVNRALTHELGLPSVP
                     KRKTGRVTLPLIAREAAPTVLVTNDDIAAALEAEDVERYSSL"
     gene            505..930
                     /locus_tag="VFD73_23870"
     CDS             505..930
                     /locus_tag="VFD73_23870"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TA system VapC family ribonuclease toxin"
                     /protein_id="HZI77016.1"
                     /translation="MTLVDVGVWLAAIWGRHVHYPVASEWFNRQADDLVFCRVTQMGL
                     LRLLSNPAIMGEDAVDRSQAWRLFDQLWSDERVLWADEPDELDAVWRAISARDDKSHK
                     LWTDDYLAAFAQAGDLALATLDRKFPGRYPSVRVESLLP"
BASE COUNT          248 a          431 c          438 g          247 t
ORIGIN      
        1 cgtgatactg aaagcagcgc ggatccggga ctggacagac gtgctgagcc tgcgtggatg
       61 agggccgtgt gactcataac ccagaggtcg cgggttcaaa tcccgccccc gctaccaagg
      121 ccagaggccg gatccgaata aggatccggc ctcttgcttg tggtttgcgc ccagaggctt
      181 ccggcggccg ctccagttcc acgctccagt tccaaagtgc ggctagccta gatgctaata
      241 tgcttttatg cgcaccacga ttgatatgcc cgacgtcctg atgcgggcgg ccaaggcgag
      301 ggcggctgag catggcgaga gcctgaagga cctagtgaac agggcactaa cgcatgagct
      361 cgggctcccg tctgtgccga agcggaagac ggggcgagtc acgctcccgc tgattgcccg
      421 tgaggcggcg ccgacagttc tcgtcacgaa cgatgacatc gcggctgcgc tcgaggccga
      481 agacgttgaa cggtactcgt cgttatgacc ttggtcgacg tcggagtctg gctcgctgca
      541 atctggggac ggcacgtgca ctacccagtc gcgtccgagt ggttcaaccg gcaggcagac
      601 gacctagtct tctgccgtgt cactcagatg ggcttgctga ggctgctgtc caacccagcc
      661 atcatgggcg aagacgcagt tgaccgtagt caagcctgga ggctgtttga ccagctctgg
      721 tcggacgaac gcgtcctgtg ggctgacgag ccggacgagc tggacgccgt ttggcgggca
      781 atctcggcgc gcgacgataa aagccacaag ctgtggacgg atgactacct agcggccttc
      841 gcgcaggcgg gcgacctggc gctggccact ctcgatcgca agtttcccgg ccgctatccc
      901 tcggtccgtg tggaatctct gctgccttga atcatcaggc tgtgcggttc gccaaatcgc
      961 cgaataaccc ttaaggcttc tatcaaggcg tatcgctgcg aggtactgcg ggcccagcgt
     1021 cagcggcggg gcttggcctt ggcggcccgc ccgccgcacc agaaacgtaa ccacccgccc
     1081 cggtcaggac cccgatccgg cggcctgctt ggcgtcgacc gctcgcgctc gccacctgtc
     1141 cgccccttgg catggccacc aatgcgggct ttgggaaccc agggaaacca tctgacctgt
     1201 ggagggtagt gggtacggtc aacggcgtga cacatccgct cctgaacccc atgatcgtgg
     1261 aagcggtgga gaaggccgcg accgagcatc gcgggcgcgc ctgggtccat agtgcgttca
     1321 ccgacttgaa ccaccgcgcg acgcacccgt gcggcatctt cacc
//
LOCUS       DASRPQ010002105         1203 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2788030, whole genome shotgun sequence.
ACCESSION   DASRPQ010002105 DASRPQ010000000
VERSION     DASRPQ010002105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2788030"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..245)
                     /locus_tag="VFD73_23875"
     CDS             complement(<1..245)
                     /locus_tag="VFD73_23875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77017.1"
                     /translation="MKPTRAVADVRTLPRVVYGHRSQMWWGTLGFIMIEGSTLFICVV
                     TYFYLRRNFATWPPEHIYRPSLVIPSIQAALMLLSNIP"
     gene            complement(242..>1203)
                     /locus_tag="VFD73_23880"
     CDS             complement(242..>1203)
                     /locus_tag="VFD73_23880"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HZI77018.1"
                     /translation="IPQLGESFFTGASMMIAIPSGIQIFCWIATIWSGRPRFTVPFLF
                     VLGFVVLFIIGGFTGVMLASVPFDQQVHDTFFVVAHFHYVLIGGAVFPLFGAFYYWFP
                     KITGRMLSERLGRWNFWLFFIGMNLTFFPMHQLGLEGMPRRVYTYLPETGWGDLNLLA
                     SIGAVIIAISMLIFVINVAVSLRNGVLAGDDPWGGETLEWAASSPPRHYNFTHIPVVA
                     SRAPMWEEGPELPVVTGLRTDVRDTLVTTLLDAEPDSKHRHPNPSIWPFLTAVATTIL
                     FVTLIFTPWGAVIGTPPLLLALLGWGWPRGRDKLEEQLVESEA"
BASE COUNT          256 a          381 c          378 g          188 t
ORIGIN      
        1 ggaatgttgc tgagcagcat gagcgctgcc tgaatcgagg ggatcaccag cgatggccgg
       61 tagatgtgct ccggcggcca ggtggcgaag ttccggcgca gatagaagta ggtcaccacg
      121 cagatgaaga gggtggaccc ctcgatcatg atgaagccca gcgtacccca ccacatctgc
      181 gaccggtgcc cgtagaccac tcgcggcagg gtgcgcacat cggccacggc gcgggtgggc
      241 ttcatgcttc gctctccacc agctgctctt ccagcttgtc ccgcccccgg ggccagcccc
      301 aaccgagcag agccagcagc agcggcggcg tgccgatcac ggcgccccac ggcgtgaaaa
      361 tcagagtcac gaagagaatc gtcgtcgcaa cggcggtgag gaagggccag atgctggggt
      421 tggggtggcg atgcttgctg tcgggctcgg catccagcaa cgtcgtcacc agggtgtctc
      481 gcacgtcggt ccgcaatccc gtgaccaccg ggagctccgg cccctcttcc cacatcggcg
      541 cgcggctcgc caccacggga atgtgagtga agttgtagtg tcttggcggg gagctggcgg
      601 cccactccag cgtctctcca ccccagggat catcgcccgc cagcactccg ttgcggaggc
      661 tcaccgccac gttgatcacg aagatcagca tgctgatggc gatgatcaca gctccgatgc
      721 tggccagcag gttgaggtca ccccagccag tctccggcag gtaggtgtac acccggcgag
      781 gcattccctc gagacccaac tggtgcatcg ggaagaaggt gagattcatc ccgatgaaga
      841 acagccagaa attccaccgt cccagccgct cgctcagcat ccggccggtg atcttgggaa
      901 accagtagta gaacgcgccg aacagcggga acacggctcc gccgatgagc acgtaatgga
      961 agtgcgctac cacgaagaag gtgtcgtgca cctgctgatc gaacggcacc gatgcgagca
     1021 tcaccccggt aaagccgccg atgatgaaca acaccacaaa gccgagcacg aaaaggaatg
     1081 ggacggtgaa cctgggtcgc ccggaccaga tcgtcgcgat ccagcagaag atctggatcc
     1141 cgctgggaat ggcgatcatc atgctcgcgc cggtaaagaa gctctctccc agctgcggaa
     1201 tcc
//
LOCUS       DASRPQ010002106         1174 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3060864, whole genome shotgun sequence.
ACCESSION   DASRPQ010002106 DASRPQ010000000
VERSION     DASRPQ010002106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1174
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3060864"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..854)
                     /locus_tag="VFD73_23885"
     CDS             complement(<1..854)
                     /locus_tag="VFD73_23885"
                     /inference="COORDINATES: protein motif:HMM:NF013068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
                     /protein_id="HZI77019.1"
                     /translation="MVETTTLDRGLPGECQVNREVANFREQFEGRDRLDQLVRQGAQQ
                     MLQQAIEAEVQEFLQEHQQRRDQGGKRLVVRNGYKPSRKIVTGAGVLEVEQPRVRDNS
                     PDQHERVQFSSAILPPYLRRSKAIEEFIPWLYLRGISTGDFSEALQTLLGEQAQGLSP
                     NVIVRLKEQWTTEYEEWNRRDLTDKQYVYLWADGIYVNVRLEDTENKRQCLLVVMGVT
                     LEGHKELVAVMDGYRESEASWSELLVDLQQRGLTLAPQLATGDGALGFWAALRKVYPQ
                     TREQRCWV"
BASE COUNT          209 a          408 c          322 g          235 t
ORIGIN      
        1 tgcacccagc agcgttgctc gcgtgtctgg ggatagacct tgcgaagagc cgcccagaag
       61 cccagggcac cgtcgccggt tgccaactgc ggagcgagcg tcaatccacg ctgttgcaga
      121 tccaccagaa gctcgctcca actggcttca ctctcgcgat agccatccat gaccgcgacc
      181 agctccttgt gcccttccag ggtcacgccc atgacgacca gcaggcattg ccgcttgttt
      241 tccgtgtctt ccaggcgaac gttgacgtag atcccgtccg cccagaggta gacatactgc
      301 ttgtccgtga ggtcgcggcg attccactcc tcgtactcgg tcgtccattg ctccttgaga
      361 cgaacgatca cattcgggct cagtccctgg gcctgttcgc ccaagagcgt ctgcaaggcc
      421 tccgagaaat cccccgtgga aatcccccgc aggtacagcc aggggatgaa ctcctcgatg
      481 gccttgctgc gccgcaagta cggcggcagg attgccgaac tgaactgcac gcgctcgtgc
      541 tggtccggcg aattgtccct cacccgtggc tgctctacct ccaggacccc ggcgccggtc
      601 acgatcttgc ggctcggctt gtaaccgttg cggacgacca gacgcttgcc gccctggtca
      661 cgccgctgct ggtgctcctg gagaaactcc tgcacctcgg cctcgatcgc ttgctggagc
      721 atctgctgcg caccctgacg caccagctga tcgaggcgat cgcgtccctc gaactgctcc
      781 cggaagttgg cgacctcccg attgacctgg cactcccctg gcaaaccgcg gtccaaagtc
      841 gtagtctcga ccatggcgta tcctttcagc cctcgtgggg ccagctgagg aaaagtaacc
      901 actttcacca gcaggatacg ccgccttttt cctttcagct agaacacacc ttttgagaat
      961 agctcccgcc tcagcgccga cgctcgtttt tggccgagta attcgtcaac tgttcatccg
     1021 cgtgacgaat tggtccctgc gcgcaagtgg cgatttccca tgaccttgcc acgccgcgcg
     1081 gaccatcctg ctcaacccgt caccgcgcca cgcgggggtc atgccaagac gagacaacat
     1141 gagacggtgg ccggggtcgg tactccgacc ccgg
//
LOCUS       DASRPQ010002107         1304 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_870836, whole genome shotgun sequence.
ACCESSION   DASRPQ010002107 DASRPQ010000000
VERSION     DASRPQ010002107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1304
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_870836"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..280
                     /locus_tag="VFD73_23890"
     CDS             <1..280
                     /locus_tag="VFD73_23890"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hotdog domain-containing protein"
                     /protein_id="HZI77020.1"
                     /translation="VDFRERIPVGALVTCSATVDYVGNSSMDITVEVYAEHVSSGQKR
                     HTHTAHVVFVALDDNGKPVRVPRLVPETTEERRRYAQAEAQHRSKRST"
     gene            277..1113
                     /locus_tag="VFD73_23895"
     CDS             277..1113
                     /locus_tag="VFD73_23895"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HZI77021.1"
                     /translation="MTVRAAAVVLSGGGAKTAAHLGACRALREAGFDPVWYVATSMGA
                     VVAAGLASGVGNDELLDQMAVLGRRGVVRDPLAPIAGLYLRSLLKPGPLRAAIEAIVP
                     ARRFSDLVVPLTVTAVDLDTGELVLFGTGAASAPLIDVLCASCALPLYYPPVTIDGRR
                     LGDGGLRAVLPLAPAADLTVDLVLAVDVGPGFDLPPGPTSSHIPSLIRAHDDATGILM
                     AASSEHQLETWRREPGRPPLVYVRPKIDRDATFRVDRIRDYAMEGRRAAREALEQWCR
                     DS"
BASE COUNT          217 a          419 c          421 g          247 t
ORIGIN      
        1 agtggacttt cgagaacgga ttcccgtggg tgcgctggtg acgtgcagtg cgacggtcga
       61 ctatgtcggg aattcttcca tggacatcac agtcgaagtc tacgccgagc acgtgagcag
      121 cgggcaaaag cgccacaccc acaccgcgca tgtagtgttc gttgcgctgg atgataacgg
      181 caagcccgtc cgggtccccc gtctggtgcc agaaaccact gaggagcgcc ggcgctacgc
      241 ccaagcggaa gcccaacacc gctcgaagcg gagcacttga ccgttcgcgc tgcagctgtt
      301 gtcctgagtg gtggaggtgc gaagaccgca gcgcacctgg gtgcctgtcg ggcactcagg
      361 gaagcggggt tcgacccggt ctggtacgtt gccacgtcga tgggagcggt ggtcgccgcc
      421 ggactggcaa gcggagtggg gaacgacgag ctgctggacc agatggcggt gctgggacgg
      481 cgtggcgtcg tacgagaccc actcgccccg attgccgggc tgtatctccg ttcccttctc
      541 aaaccgggac ccctgcgcgc cgccatcgag gcgatcgttc cggctcggcg attctcggac
      601 ctggttgtgc cgctcaccgt gaccgccgtg gatctcgata ccggcgagct ggtactcttc
      661 ggcaccggtg ccgccagcgc accgttgatc gatgttctct gcgccagttg tgcgctgccc
      721 ctgtactatc ctcccgtaac catcgatggc cggcgcttgg gagacggcgg gctcagggcc
      781 gtgctccctc tcgcgcctgc cgccgatctc actgtcgacc tcgttctggc ggttgacgtg
      841 ggccccgggt tcgatcttcc tcctggtccg acgtcctccc acataccctc gctgatccga
      901 gcgcacgacg atgcaaccgg aattctgatg gccgcgagct ccgagcatca gctcgaaacc
      961 tggcggcgcg aaccgggacg gcctccactg gtgtatgtcc gtcccaagat cgatcgggat
     1021 gcaaccttcc gagtggatcg cattcgtgat tatgccatgg agggcaggcg ggccgcccgc
     1081 gaggcactcg agcagtggtg cagagactct tgacccctcc tccattccgg gcaaattgag
     1141 cccatgaaag cctccgaagc gatggtaccc gatccgcacc gctggtgatc gcggaacagt
     1201 tcgggacgct ggcctcgctg tttccgggaa ggatcgatct gggtgatcat gcgcatggtg
     1261 gtggactttc cggcgccgtt aggccccaga aaacctacca cctg
//
LOCUS       DASRPQ010002108         1184 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1520301, whole genome shotgun sequence.
ACCESSION   DASRPQ010002108 DASRPQ010000000
VERSION     DASRPQ010002108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1520301"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..413
                     /locus_tag="VFD73_23900"
     CDS             <1..413
                     /locus_tag="VFD73_23900"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HZI77022.1"
                     /translation="SHFDGLATGALWVRVLGLAMLAASTVFTLWARFSLGTSWSVAPK
                     VQGNHQLRIHGPYAVTRHPIYTGVLGMLLGATLLSEIGQWIVLFPVGLILFEVKIRME
                     EHLMLATFPDKYPRYRRQVPQLIPGLFILRQHHS"
     gene            complement(472..891)
                     /locus_tag="VFD73_23905"
     CDS             complement(472..891)
                     /locus_tag="VFD73_23905"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HZI77023.1"
                     /translation="MLMYERLLVAVDHSEVSDRVIAAARDIATLSKGKVWVLHLQERE
                     WGRVGRTPTESDEEAREAVTQGVQALIQAGVDAQGEVREALYGHAAREIVDDAKKHDA
                     GVIVMGSRGRSDLAGLVLGSTAHKVIHLTDRPVLVIR"
BASE COUNT          206 a          431 c          345 g          202 t
ORIGIN      
        1 gcagccactt tgacggcctg gccactgggg ccttgtgggt ccgggtcctc gggctcgcca
       61 tgctggccgc ttcgacggtg ttcacgctgt gggcccggtt ctcgctcggc accagttgga
      121 gcgtggcgcc caaggtccag ggtaatcacc agctccgcat tcacgggccg tacgcagtga
      181 cacgtcatcc gatctacacc ggcgtgctcg ggatgctgct cggcgccacg ctgctcagcg
      241 agatcggtca gtggatcgtg ctcttcccgg tcggcctgat tctgtttgag gtcaagatcc
      301 gcatggagga gcatctgatg ctggcgacct tccccgacaa gtacccccgg taccgccggc
      361 aggtgccaca gctgatcccg ggtctcttca tcctgcgtca acaccactcg tagcgattca
      421 aacaggccgc ctgcagtggt cgaccaccgc gaccaccaga ctcataccgt gtcagcggat
      481 gaccagcacc ggccggtcag tcaggtggat cactttatgt gcggtgctgc cgagcacgag
      541 cccggcgagg tcgctcctgc cccgggaacc catgacgatg acgccagcat cgtgcttctt
      601 agcgtcgtcg acgatctcac gcgccgcatg cccgtacagc gcctcccgca cctctccctg
      661 ggcgtcaacc ccggcctgga tcagcgcttg aaccccctgc gtgaccgcct cccgcgcctc
      721 ctcatccgac tcggtcggcg ttcgccccac ccggccccac tcccgctctt gcaggtgcag
      781 cacccacacc ttgcccttgg acaaagtggc gatatccctg gccgcggcga tcacgcggtc
      841 agagacctcc gaatgatcca cggcgaccag caatctctca tacatcagca ttcctccatg
      901 tgctagcccg cccgggtaga tcaagaaaca gtactccgcc ggcccggggc acagtcgtcc
      961 tcgcgccgcc cgggaatccg gtcggcgcca acacccaact ggccaagtgt tctgggcact
     1021 agggcgagac tcacggccgc gggagatgct gatgggccag ccgactccag cccactaggc
     1081 cggggatcac aagatcggaa atgggaacgc cacgccccgg gccctctcag cccggcatca
     1141 cacgagggag agccattccg agagccaaca gagaccggcg tcag
//
LOCUS       DASRPQ010002109         1258 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4008075, whole genome shotgun sequence.
ACCESSION   DASRPQ010002109 DASRPQ010000000
VERSION     DASRPQ010002109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1258
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4008075"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..646
                     /locus_tag="VFD73_23910"
     CDS             <1..646
                     /locus_tag="VFD73_23910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="HZI77024.1"
                     /translation="CPTVALLTAMDRPLGRACGNALEVEEAIEALRGEGPPDVMEVTY
                     ALGTEMLLVVGAAEDPGAARKQLEKSVTSGSALEKLGQIIECQGGDRAVIDSPDRLPQ
                     AAEVEVHRADRDGVVAQVEPRRIGRAILELGGGRRTIEDTIDPAVGFVIPIKPGDRVK
                     KGEAIASVFARDRNGIASGMLGLKEAIVIGETGTLTPLISHRVTAESVNELSST"
     gene            655..912
                     /locus_tag="VFD73_23915"
     CDS             655..912
                     /locus_tag="VFD73_23915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77025.1"
                     /translation="MPLISGPVGTLLVAFAAIITFVLWLRRDRNYPGPRLHGDEGIDR
                     EELEQAEREVRELETHQRPDERFLGDDWGPGAGRPRPPERL"
     gene            915..>1258
                     /locus_tag="VFD73_23920"
     CDS             915..>1258
                     /locus_tag="VFD73_23920"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77026.1"
                     /translation="MELLILNHAEVAALLSMAECMEVMAEVLETLAAGDAILPLRTVI
                     RIPDSPNAFGAMPAYLARPAAIGIKVITVFPENGEAGLDSHQGAVLLYEAQHGQLQAI
                     MDATTITAIRTAA"
BASE COUNT          245 a          375 c          432 g          206 t
ORIGIN      
        1 ctgtcccacc gtggcccttc tcacggcaat ggatcgtccg ctgggtcgag cctgcggcaa
       61 cgccctcgaa gtggaggagg caatcgaagc gctccgcggc gagggacccc ccgacgtgat
      121 ggaagtgacc tacgcgctgg gcacggagat gctgctcgtc gtcggtgcag cggaggatcc
      181 gggggccgct cgcaaacagc tggagaagag cgtcacctcg ggcagtgcgt tggaaaagtt
      241 gggccagatc attgagtgtc agggtggaga cagagcggtc atcgacagcc cagaccggtt
      301 gccgcaagcc gccgaagtcg aagtgcaccg agccgaccgc gacggagtgg tggcacaggt
      361 ggagccgcgg cgcatcgggc gagctatact ggagttgggc ggaggaagac ggactatcga
      421 ggacactatc gatcctgcgg tgggattcgt gattccaatc aaacccggcg accgggtcaa
      481 gaaaggggag gcaatcgcct ccgtatttgc ccgcgatcgg aatgggatcg cgtccggcat
      541 gctcggcctc aaagaggcca tcgtcatcgg cgagactggg acgttgactc cgctcatcag
      601 tcaccgagtc accgcggaga gcgtgaacga actctcttct acgtgaggta gtgcatgccc
      661 ctgatctcgg ggccagtcgg aactctgttg gttgcatttg cggcgatcat caccttcgtg
      721 ctctggctcc gccgggaccg gaactatccg ggtccgcgac tccatggaga cgaggggatc
      781 gatcgagaag agctggagca ggcggaacgc gaggtccgcg agttggaaac gcaccagcga
      841 cccgatgagc gttttctggg agacgactgg gggccgggag ccggccggcc gcggccgccg
      901 gaacggctct agtcatggaa ctcctcattc tcaatcacgc cgaggtggcc gcactcctgt
      961 ccatggctga gtgcatggag gtgatggctg aggtgctgga gacgctcgcc gccggcgacg
     1021 cgatcctgcc gctccgcacc gtcatccgga ttccagacag ccccaacgca ttcggagcaa
     1081 tgccggccta tctggcgcgt cccgccgcaa tcggcatcaa ggtgatcacc gtgttcccgg
     1141 agaatgggga ggcgggtctc gattcgcacc agggagcggt gctcctgtat gaggcgcaac
     1201 acgggcaact gcaggcaatc atggacgcga ccacgatcac cgcaattcgg accgccgc
//
LOCUS       DASRPQ010002110         1121 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2151634, whole genome shotgun sequence.
ACCESSION   DASRPQ010002110 DASRPQ010000000
VERSION     DASRPQ010002110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2151634"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            103..>1121
                     /locus_tag="VFD73_23925"
     CDS             103..>1121
                     /locus_tag="VFD73_23925"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HZI77027.1"
                     /translation="MRAALEAHRLSYQQGVRLGRHTVDFLVQVAQEKQVIVECESKGY
                     HEPFKDSEREKGLTLAGYPLCRFSGSEIEADVEKCIRSVLEAVHYRTLPAHQMDSDLD
                     PSQREAVASVSGPIRVLAPAGSGKTKTLVNRILNLLNQGVAPERILALAFNKKARDEM
                     QDRLERRGGAGVEVRTFHSFGYEIVREGSGWTFGGTTQKKSAKALMRSAIQEHIGLPP
                     LRNQDPLDAFLDGLRRAKMELPALSTVTVEYGDKLYPLEPIFHSYVQKQVSASFMDFD
                     DMIYLAVRLLLEKSALRRSYQSRFEFVLVDEFQDLNEAQLLLLQIIGLPENNIFAVGD
                     DDQMI"
BASE COUNT          230 a          340 c          348 g          203 t
ORIGIN      
        1 caggcgctaa cactcctgga gcgctccaat taccagatcg cctcgcccga gctgctggat
       61 cccggcgcgc agaagatcct gttcacgccg atcgaggaaa aaatgcgggc ggcgctggag
      121 gcacacaggc tctcgtacca acagggggtg cgcctgggcc gccacacggt ggattttctg
      181 gtgcaggtag cgcaagagaa gcaggtgatc gtggagtgtg agagcaaagg ctaccacgag
      241 ccattcaaag actccgagcg cgagaagggc cttacgctgg cgggctaccc attgtgcagg
      301 ttttcgggct cggagatcga agcagacgtg gagaagtgca tccggtccgt gctggaagcc
      361 gtccactacc ggacattgcc cgcgcaccag atggacagcg acctggaccc gagccagcgg
      421 gaggctgtcg cctcggttag tggaccaatc cgtgtccttg caccggcggg ctccggcaag
      481 accaagaccc tggtcaaccg catcctgaat ctgctcaacc agggggtcgc ccccgaaagg
      541 atcctggcgc tggcgttcaa taagaaagcc agggatgaaa tgcaggaccg cctggagcgc
      601 cgcggcggcg cgggtgtgga ggtccgcacc ttccattcct ttggctacga gatcgtccgg
      661 gagggctcgg gctggacctt cggcggcact acgcagaaaa agtccgccaa agcgctgatg
      721 cgctctgcca tccaggaaca tatcgggctg cctcccctgc gcaatcaaga cccgctggat
      781 gccttcctgg acgggttgcg ccgtgccaag atggagctgc ctgcgctttc cactgtcacc
      841 gtcgaatacg gggataagct ctacccactc gagccgatct tccattccta tgtgcagaag
      901 caggtgagcg ccagcttcat ggacttcgac gatatgatct acctggcggt ccgcctgctc
      961 ctggaaaaga gcgccctgcg ccggtcatac cagtcacgct tcgagttcgt gctcgtggac
     1021 gagttccagg acctgaacga ggcccagctg ctcctgctgc agatcattgg cctgcctgaa
     1081 aacaatatct ttgcggtggg tgacgatgac cagatgatct a
//
LOCUS       DASRPQ010002111         1007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2151820, whole genome shotgun sequence.
ACCESSION   DASRPQ010002111 DASRPQ010000000
VERSION     DASRPQ010002111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2151820"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            16..>1007
                     /locus_tag="VFD73_23930"
     CDS             16..>1007
                     /locus_tag="VFD73_23930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77028.1"
                     /translation="MPADQSLSSTESGSYRTLYDCPDLHLSENGPLVRVIVATHPAPT
                     SAKKKRQVGLIRDGIVYELFWTNLPQSAFTASDVVSLYLHRGAFETALEDEDEELDPD
                     CWCSHSAWGQEAWQIVAQWTWNLRLELGHQLLPEPVRTTEFAPALRAPHEHVSAPPTS
                     PASSAPQSGYAPPAPATSWKAGRFTGADFPLQPDGTLRCPADHVLVPQERRRERNGSL
                     RVVYSASIRDCRPCPLREQCQWSGSATTKPRQVSVLLHPLAVGSAPLLWRDWNRRHQR
                     QACLRLHRQHLEVRIEPLLPRTGASSPPIISRAEPSALPLIMGRAAGSQCSNRSG"
BASE COUNT          186 a          344 c          281 g          196 t
ORIGIN      
        1 caggcgcgtt tgcacttgcc tgccgatcaa tctctcagca gcaccgagag tgggagctac
       61 cgcacgctct acgactgtcc cgacctgcac ctctccgaga acggccctct cgtgcgtgtc
      121 attgtcgcta ctcacccggc cccaacaagc gcgaaaaaga aacggcaagt cgggctcatt
      181 cgcgatggga tcgtgtatga actcttctgg accaatctgc cccagagcgc ctttactgcc
      241 tctgatgtgg tctcgctcta cctgcaccgc ggggcctttg agacggctct ggaagacgaa
      301 gatgaggagc ttgaccccga ctgctggtgc tcgcattcgg cctggggaca ggaagcctgg
      361 cagatcgtcg ctcaatggac gtggaacctc cgtctggaac tgggacacca gctgttgcct
      421 gaaccggtgc gcaccaccga gtttgcacct gccctaagag cgccgcacga gcacgtatcc
      481 gcgcctccga cctcacctgc ttcctcagct ccccaatctg gatatgctcc acctgctccc
      541 gcgacgtcct ggaaagctgg ccgtttcacc ggagcagact ttcctctcca acccgatggg
      601 acgcttcgat gcccagcaga tcacgtgctg gttcctcagg aacgccgccg agaacgcaat
      661 ggcagtctgc gggtggtcta ctccgccagc attcgcgatt gtcgcccctg tcctttgcgg
      721 gagcaatgcc aatggagcgg cagcgcaacg accaaaccgc gccaggtgag cgtcctgctc
      781 caccccctgg cagtgggatc ggctccgctg ctctggcgtg actggaaccg acgccaccag
      841 cgacaggcgt gtttgcgtct gcatcgccag catctggagg ttcggattga accgctcctc
      901 cccagaaccg gtgcttcttc cccaccgatc atctctcgcg cggagccgag cgcattaccg
      961 cttatcatgg gacgagcggc tggctcgcaa tgctcgaaca gatcagg
//
LOCUS       DASRPQ010002112         1350 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_554745, whole genome shotgun sequence.
ACCESSION   DASRPQ010002112 DASRPQ010000000
VERSION     DASRPQ010002112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_554745"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..732)
                     /locus_tag="VFD73_23935"
     CDS             complement(<1..732)
                     /locus_tag="VFD73_23935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77029.1"
                     /translation="MEETPDKTEIPVAAPPPDPATKLQRQLTPRLSADLESELANRIL
                     TDFNQAIQDRSEWENRLADWEDQYYNRTPDEKIFPWPGASNFHVPITMMHVETYKPRL
                     HEGVLGEKDPVIVVPTTQAGEDRKDKIETLLNWQLRTQMRIEPKVAQSAHLFLQPGLA
                     VAKTYWKVERKWRKFIREFPVGTTLDTVFEAIFGDAKPKNLDDLGNGKFYGEIRTSPQ
                     GGQPLECYLTLNVLEDGLQVLVEREE"
     gene            complement(732..1283)
                     /locus_tag="VFD73_23940"
     CDS             complement(732..1283)
                     /locus_tag="VFD73_23940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77030.1"
                     /translation="MRLKVAALSVAAAFLLALAPFTVQFQPWQYNPENFPRIVVWAGC
                     SAEVHVSDQHSPAESFYDPMNHEMYVGTREDGDIPYYAGLIILLHETGHCLQNQSGFY
                     SPYEYRRNPVPFELEADRQSADLACSLGLDGKKLLRDTFQWAHDEFAYNGDDNHGTLA
                     ERMAMGDKAPACQKQEPQRFASL"
BASE COUNT          208 a          419 c          445 g          278 t
ORIGIN      
        1 ttcctcccgc tccacgagga cctggaggcc gtcttccagc acgttcaggg tcaggtagca
       61 ctcaagcggc tgtccgccct gcgggctggt gcggatctct ccatagaact tcccgttgcc
      121 caagtcatcc aggttcttcg gcttggcgtc cccgaaaatc gcctcgaaga ccgtgtcaag
      181 cgtggtgccg accgggaact cccggatgaa cttgcgccac ttgcgctcaa ccttccagta
      241 cgtcttggcg accgcgagcc ccggctggag gaacaggtgc gcggactgcg cgaccttggg
      301 ctcaatccgc atctgcgtcc tgagctgcca gttcagcagg gtctcgatct tgtccttacg
      361 atcttccccg gcctgggtcg tcgggaccac gatgactggg tccttctcgc ccagcacgcc
      421 ttcgtggaga cggggcttgt aggtctccac atgcatcatc gtgatcggga cgtggaagtt
      481 gctcgccccg ggccagggga agatcttttc gtcaggggtg cggttgtagt attggtcttc
      541 ccagtcggcc agccggttct cccactcgct gcggtcctga atcgcctggt tgaagtcggt
      601 caggattcgg ttcgccagtt cggactccag gtctgcactc aggcgcggcg tcaattgccg
      661 ctgaagtttg gtggcagggt ccggtggcgg ggccgctacg gggatctcag tcttgtccgg
      721 ggtttcctcc atcacaggga cgcgaacctc tggggctcct gcttctggca ggccggggcc
      781 ttatcgccca tggccatgcg ttcggccagc gtcccgtggt tgtcgtcgcc gttataggcg
      841 aactcgtcat gcgcccactg gaaggtgtcc cggagtagct tcttgccgtc gaggcccagc
      901 gagcaggcga ggtcagcgga ctgtcgatcc gcctccagct cgaagggcac cgggttccgg
      961 cggtactcgt aggggctgta gaacccggac tgattctgga ggcagtgccc ggtctcgtgg
     1021 agcaggatga tgagcccggc gtagtagggg atgtcgccat cctcacgggt gcccacgtac
     1081 atctcgtggt tcatggggtc gtagaacgac tcagcagggg agtgctggtc ggagacgtgg
     1141 acctcagccg agcacccggc ccagaccacg atcctgggga agttctcggg gttgtactgc
     1201 cacggctgga actggaccgt gaacggagcc agggccagca ggaaggctgc ggcgacggag
     1261 agagcggcaa ccttcagcct cacggggact ccactcggtc acgctccgcg atggtccgtg
     1321 ccacctcgtc gtgtacctgc tccagcgtgt
//
LOCUS       DASRPQ010002113         1180 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1521056, whole genome shotgun sequence.
ACCESSION   DASRPQ010002113 DASRPQ010000000
VERSION     DASRPQ010002113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1180
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1521056"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..194
                     /locus_tag="VFD73_23945"
     CDS             <1..194
                     /locus_tag="VFD73_23945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77031.1"
                     /translation="YTLTEDGIRIAVFYTKVYSRLLVPLTAANQPEAPPDLRAAREAI
                     TRHVNGYASRARLPAPRET"
     gene            complement(280..>1180)
                     /locus_tag="VFD73_23950"
     CDS             complement(280..>1180)
                     /locus_tag="VFD73_23950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77032.1"
                     /translation="ACYGTSLTAVAIDICCRQAVTRLPASELLGPRQSGNEDKGPCLA
                     CTGLAHGLTGGLARAVPPEEAIMTRDKAVKKAARNRAAGTGEPYTRARRAVEAEYEAQ
                     RTSEDQIASGSQDSASQDQARWWRADVLAENDRIDELRQHAEAGDDHAQRQLASWLSD
                     RRQIDEAITVIRPLADCDDDIAQLWLARWLAERGHLDELRRRAETGDSHALHHLAGWL
                     ADHGCLDELRELLTDHRELLASSWGSAGGQHQMQVLRLKADLGDDHARQALVHGLARM
                     RERAQAGNEYAQRALAEWQDEQG"
BASE COUNT          195 a          423 c          356 g          206 t
ORIGIN      
        1 gctacaccct gaccgaggac ggcatccgca tcgccgtctt ctacaccaag gtttacagcc
       61 ggctgctcgt cccgctgacc gccgcgaatc agcccgaggc accgccggac ctccgcgccg
      121 cgcgggaagc catcacccgg cacgtcaatg gttacgccag ccgggcacgc ctcccggcgc
      181 cgcgtgaaac ttgacacaaa cgtccacaag ctcgcgacca aaggtcgtta agcgtcaagc
      241 tgggagttcg tatcgcagga cggaggcctg aggtagaagc tagccttgct cgtcctgcca
      301 ttcggccagc gctcgctggg catactcatt acccgcctga gcccgctccc gcatcctggc
      361 cagcccgtgg accagggcct gccgggcgtg gtcgtctccg agatccgcct tcagtcgcag
      421 cacctgcatt tgatgctggc cgccagcgga cccccagctc gatgcgagca gttcccggtg
      481 atcagtcagg agctcgcgca actcatccag gcagccgtga tcagccagcc acccggccag
      541 gtgatgcaga gcgtgagagt cccctgtctc ggcacgccgc cgaagctcat ccaaatggcc
      601 gcgctcggcc agccagcgag ccagccagag ctgagcgatg tcgtcgtcac agtcggccag
      661 tggacggatc accgtaatgg cctcgtcgat ctgacgccgg tcagatagcc agctggcaag
      721 ctgacgctgc gcgtggtcgt ctccggcctc agcatgctgg cgaagttcat cgatgcggtc
      781 gttctcggcc agcacgtctg cccgccacca ccgcgcctgg tcctgggatg cggaatcctg
      841 tgagccgctg gcgatctggt cctccgaggt ccgctgagcc tcgtattcgg cctcaaccgc
      901 tcgccgcgcc ctggtgtatg gctcgcccgt gccagccgct cggttacggg ctgccttctt
      961 gacagccttg tcccgtgtca tgatcgcttc ttccggcggt accgcccgcg ccagcccgcc
     1021 cgtcagacca tgagctaaac cggtacacgc gaggcatggc cccttgtcct cgttgccgct
     1081 ctggcgcggg ccgagcagct cggaagcggg caggcgtgtt actgcctgac ggcagcatat
     1141 gtctatcgcg acagcagtca agctagtgcc atagcaggca
//
LOCUS       DASRPQ010002114         3082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2432188, whole genome shotgun sequence.
ACCESSION   DASRPQ010002114 DASRPQ010000000
VERSION     DASRPQ010002114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3082
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2432188"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..205)
                     /locus_tag="VFD73_23955"
     CDS             complement(<1..205)
                     /locus_tag="VFD73_23955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77033.1"
                     /translation="MRRDVATLLSRSKNPFFEHADAEYFLAEQDGTVVGRIAAISNRL
                     HNETHQDRVGFFGFFECVDDQAVA"
     gene            complement(316..1521)
                     /locus_tag="VFD73_23960"
     CDS             complement(316..1521)
                     /locus_tag="VFD73_23960"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase
                     family protein"
                     /protein_id="HZI77034.1"
                     /translation="MDTQELQQVALFEKCRQFTKARELQAVGLYPYFNPISESEDTVV
                     VIDGQKRIMLGSNNYLGLTHHPKVLEAASRALTRYGSGCTGSRFLNGTLDLHEQLEGA
                     LAEFLGKEDCLVFSTGYSANLGLISGLVGRGDVVYLDKLDHASIVDGAKLSYGETERF
                     NHGDLANLERRLDRNGSGRGAMIVVDGVYSMEGNIADVPGLSRLARRYGVALALDDAH
                     ALGVLGPNGDGTAAHFGMTEEVDIIAGTFSKSLASIGGFVAAAENVIHYLRHHSRPLI
                     FTASLPPANTAGVLAALQVLQQEPERRDQLWANTHRLQNGFRELGFDIGPTETPIVPV
                     LIGPLEKTFLMWRRLFDAGVFTNPVAPPAVPPSQCRLRTSLMATHTFEQIDFALEQFA
                     TIGRDLGVI"
     gene            1731..>3082
                     /locus_tag="VFD73_23965"
     CDS             1731..>3082
                     /locus_tag="VFD73_23965"
                     /inference="COORDINATES: protein motif:HMM:TIGR03296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M6 family metalloprotease domain-containing
                     protein"
                     /protein_id="HZI77035.1"
                     /translation="MSRWLTVACILALSPSAIQAQYPRARRGEFEVPGLDFRRDGGWR
                     KRVGEIRTERHRLLRSGNLSALNLAAPTAAAGTRVSGRVIIPVVPIAFRNAPPPFPSE
                     AYENVFFSSAPSDRPYSVKTFYEQLSNGNLTVDGRIFPWITADSADSYYEDGCNGIGV
                     LGPCPSRPVSRLGELLLRTLDVISRGPTGSTVWSQFDNDGPDGIPNSGDDDGVVDFVT
                     FLQADQDGACPDSPHIWAHRFVIRAWNGGSPYVTQTPWAGHPGQFLKVDDYIMQSAVG
                     GNSACDKTALMPIGTVAHETGHTFGLPDLYDTDLSSSQATEGIGEWGLMGSGNYARPY
                     SPARYEAWSLFEMGWVTVDTLSSGRRVSLGPVASTDSILYLAVPGTDEYYLFENRQSQ
                     ESDTAQMNPAFGSRQKAPGLLVWHIDQGQLDSHGFTRDNRVNVGPVHGVALVQADGRD
                     "
BASE COUNT          570 a          971 c          998 g          543 t
ORIGIN      
        1 tggccaccgc ctgatcgtcg acacactcga agaagccgaa aaaaccgacg cggtcctggt
       61 gggtctcgtt gtggagccga ttgctgatgg cagcaatccg gccgaccacg gtgccgtcct
      121 gctcggccag gaagtattcc gcgtcggcgt gctcgaagaa ggggttcttg ctccgagaga
      181 gcagggtggc gacgtctcga cgcaaaggcg ggacccagag agggtcccgc gcgtggagtc
      241 gatacggcag atcgatgaac cgtttgagat cccgcccggt gcgcgccgct cggacgcgca
      301 gggcggtgga tgcggtcaga tgacccccag gtccctgcct atggtagcga actgttccag
      361 agcaaagtca atctgctcga aggtgtgggt ggccatcagg ctggtgcgca accggcactg
      421 agacggcggc accgcgggcg gagctaccgg attggtgaat acgccggcat cgaaaagacg
      481 gcgccacatg aggaaggtct tttccaatgg gccgatcagg accgggacga tcggtgtctc
      541 cgtgggcccg atgtcgaatc caagctcccg gaaaccattc tgaaggcggt gggtgttggc
      601 ccacagctgg tcccgccgtt ccggttcctg ctgcagcacc tgcagcgcgg ccagcacacc
      661 ggcagtgttg gccggtggca gcgaggcggt gaagatcagg ggacggctat ggtggcggag
      721 ataatggatg acgttttccg cggctgccac gaagccaccg atcgaggcca gcgacttgga
      781 gaaagtgccc gcgatgatgt cgacttcttc ggtcatgccg aagtgggccg ccgtcccatc
      841 gccgttggga cccagcacgc cgagcgcgtg ggcatcgtcc agcgccaggg ccacaccgta
      901 ccggcgcgcc aggcgggaga gtccaggaac atcggcgatg ttcccttcca tggagtagac
      961 tccgtccacc acgatcatgg cgccccgccc ggacccgttc cgatcgagcc ggcgctccag
     1021 gtttgccaga tcgccgtggt tgaaccgctc cgtctcaccg tacgagagct tggcgccatc
     1081 gacaatggag gcgtgatcca gcttgtccag gtagaccacg tcgccccgcc caaccaggcc
     1141 cgagatcagg cccaggttgg ccgagtagcc ggtggagaag accaggcagt cctccttccc
     1201 caggaattcg gccagcgcgc cctccagctg ctcgtgcaga tcgagggtgc cgttcaggaa
     1261 gcgactcccg gtacagcccg agccataccg agtgagagcg cgggaggcag cttccaagac
     1321 cttgggatgg tgggtcagtc ccaggtagtt gttggacccc agcatgatcc gcttctgacc
     1381 gtcgatgacg acgacggtgt cctccgattc ggaaatcgga ttgaagtacg gatagaggcc
     1441 taccgcctgc aactcgcgcg ctttggtgaa ctgcctgcac ttctcaaaca gcgcgacctg
     1501 ctgaagctct tgagtgtcca cggtgcctcg gcccttggag gagaaagaat ccccacatca
     1561 ctatgtcact gaacggctta aactagtgtt gccgggatga gggcacaagc cagacattgc
     1621 acttgcctat tcgggccccg aggtcgcgca agggccgagc cgctggaccc ggaatggcag
     1681 ggtacttact tttcggcctc cccaagatca ggtgcagatt gttgctcggt atgtcccgct
     1741 ggctgacagt ggcatgcatc ctcgcgctct ccccctccgc catccaggcc cagtatccgc
     1801 gtgcccggcg gggagaattc gaggtccccg gcctcgattt ccggcgggat ggcggctggc
     1861 gcaagcgggt gggtgagatt cggacggagc ggcatcgcct gctccggagc ggcaatctga
     1921 gcgccctgaa ccttgcggct cccacggccg cggccggcac ccgggtgagt ggcagggtca
     1981 tcattcccgt cgtgcccatc gcctttcgca atgcgccgcc accgttcccg agtgaggcgt
     2041 acgaaaacgt gtttttcagc tccgctccga gcgaccgccc ctacagcgtc aaaacgttct
     2101 acgagcagct gtccaacggg aatctgacgg tcgacgggag aatcttcccc tggatcaccg
     2161 ccgactcggc ggacagctac tatgaagacg gctgcaatgg gatcggggtt cttgggccgt
     2221 gtccttcacg tccggtgagc cgtctcgggg agttgctgct tcgcaccctc gacgtgatct
     2281 cgcggggtcc gaccgggagc accgtctgga gccagttcga taacgatggt cccgacggta
     2341 ttcccaattc cggcgatgac gacggcgtgg tcgacttcgt gacctttctg caggctgacc
     2401 aggacggcgc ctgtcctgac tctccccaca tctgggctca ccgctttgtc atccgggcct
     2461 ggaacggggg ctcgccctac gtgacgcaga ccccttgggc tggccacccc ggtcagttcc
     2521 tcaaggtaga tgactacatc atgcagagcg cggtcggcgg caacagcgcc tgcgacaaaa
     2581 ccgcgctcat gccgatcggc acggtggcgc acgagaccgg acacaccttt gggctgcccg
     2641 acctctacga taccgacctg agcagcagcc aggcgaccga gggcatcggc gagtgggggc
     2701 tgatgggcag cggcaactac gctcggccct acagcccggc tcgatacgag gcgtggtcac
     2761 tgttcgagat ggggtgggtc accgtggaca cgctctcgtc cggtcgacgg gtgagcctgg
     2821 gaccggtggc ttcgaccgac agcatcctct atctcgccgt gcccggcacc gacgagtact
     2881 acctcttcga gaaccgccaa tctcaagaga gcgatactgc ccagatgaac ccagcatttg
     2941 gaagccggca gaaagcaccg ggtttgctgg tgtggcacat tgaccaaggg caactcgact
     3001 cgcacggttt cactcgggac aatcgggtca acgtaggacc ggtccacgga gtggcgctgg
     3061 tccaagccga tggacgcgac ga
//
LOCUS       DASRPQ010002115         1368 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2789222, whole genome shotgun sequence.
ACCESSION   DASRPQ010002115 DASRPQ010000000
VERSION     DASRPQ010002115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1368
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2789222"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..1362
                     /locus_tag="VFD73_23970"
                     /pseudo
     CDS             153..1362
                     /locus_tag="VFD73_23970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611382.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          266 a          436 c          438 g          228 t
ORIGIN      
        1 caaacaccag ccttcatgac gccgtaaaaa tagcagcccg ttgacgaagt gcttgttcag
       61 tcggagcgac ggtcgaagcg catgtttgat ccgcccccgt tggagtggtc catcctgaag
      121 tatggcttct gagccgaagg aggatcacga cgatgggtaa gaagagacac ccccccgaag
      181 agatcgtgtc caagctgcgc caggtcgatg tcctggttgc gcagggaacc ccggtggcgg
      241 atgcggtccg ctccatcggg gtcacggagg tcaccctcgg gtcaagcccg agggcaggct
      301 gtactatcgc tggcgccagg agtacggcgg gctcaagtcc gaccagatca agcgcatgaa
      361 ggagctggaa accgagaacc agcgcttgcg caaagccatc gccgacctca cgctggacaa
      421 gctgatcctg caggaggccg cccggggaaa cttctgagcc ccgcgcgtcg gcgcgcctgt
      481 gtcgagcaca tccggtctgt gctgaccatc tccgagcgcc gcgcctgccg ggcgctcggg
      541 cagcaccgct ccacacagcg caagacgccg cggggccgag aggacgaaga ggcgctcacg
      601 gctgacctca tcgagctggc gcgccagtat ggccgctatg gctaccgcaa aatcgcggct
      661 ctcctgcaag acgcgggctg gcttgtgaac gacaagcggg tcgagcggat ctggcgccgg
      721 gagggcctca aagtgccccc gaagcagccc aagcgctcac ggctgtggcg cgcagacggg
      781 tcctgcatcc gactgcggcc ggagtacccc aatcacgtgt ggtcgtatga cttcgtcgag
      841 gatcgcaccc atgatggacg caagtttcgg atgctcaatg tggtcgatga attcacgcac
      901 gagtgcctgg ccatccgggt ggatcgcaag ctgaaggcca tcgacgtcat cgacgtgctc
      961 tcggacttgt tcatcctgcg cggggtgccg ggtcacatcc gttccgacaa tgggccggag
     1021 ttcgtggcca aagccgtgca gcggtggatc acagcggttg gggccaagac ggcctacatt
     1081 gcccccggct caccgtggga gaacggctac gtggagtcgt ttaacgcacg gctccgcgac
     1141 gaactgctgg atggggagat cttttacacc ctgcaggagg ccaaggttgt gatcgaaagc
     1201 tggcgacgcc attacaatac caagcgcccc catgcctctt tgggctatcg gccaccagct
     1261 ccggaggtgt tcgtgcccgc cttcgccgcc tggccggctg cgctcacccg accggctccg
     1321 ccggccaggc tctcgctagc gcccagacca accatgaact aacattca
//
LOCUS       DASRPQ010002116         1636 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3417219, whole genome shotgun sequence.
ACCESSION   DASRPQ010002116 DASRPQ010000000
VERSION     DASRPQ010002116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3417219"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(302..>1636)
                     /locus_tag="VFD73_23975"
     CDS             complement(302..>1636)
                     /locus_tag="VFD73_23975"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HZI77036.1"
                     /translation="IQDAVLGAEALNALAGFDFETGQIEAARERFYRALELGGASAEL
                     RGRTEQNLGILANIQGRLAEALAHYQRSLAAFESSGDERGCAIAYHNLGMVSADRELW
                     DDADRYFTRTLEMAEVIGDVHLQGLGLLNHAEVHIARQRYEEARANAESALAIFDRLG
                     SRLDKADAYKVIGRVYRETGRNALAESRLRSAVELAVSTGSILSEAEASRELALLYQN
                     MGRNQEALRLLNSAHRLFGRLDARVDLVDVSTKVVRLEETYFAVVRNWGQSIESSDSY
                     TFGHCERVADYAIAVATELGLDEEQKTTIRIGAYLHDLGKVRVPHEILNKPGSLTAEE
                     FRVIQMHPVWGLELLATVEFPWDIKPIIRWHHERYDGTGYPDRLRGDEIPVNAQIICI
                     VDVYDALTTTRSYRPALSHAAALLKIQESRGWWRPDVYHAFLRSIGRASAAA"
BASE COUNT          286 a          553 c          508 g          289 t
ORIGIN      
        1 cggtcgcggc gatgaccacg ctgccgcagt ccgcacagct tcgaccacgc tcgcggcatc
       61 cggacagcag tccaatcagg agcagaagcc cggcgtgtgg gcggctcatc atccagatcc
      121 tctccattcg agggcgggcc atgcgtagac cgtcggttca cctttaactg attgttccgc
      181 cccaggttac cgccgggcat aggcgctcag cccaggaacg atgtcaattc caggagtatc
      241 ggctgaatgg ggaggtttac ggagaggagt atcaccagcg gggccaacca ggactggcct
      301 actaggcggc ggcggacgcc cggccgatgg accgcagaaa ggcatggtac acgtccggcc
      361 gccaccagcc ccgagattcc tgaatcttga gcagcgccgc ggcatggctc agtgccggac
      421 gatagctccg ggtcgtggtg agagcgtcgt acacgtcgac gatgcagatg atctgcgcgt
      481 tcaccgggat ttcgtctccc cggagccggt ccgggtagcc agtcccatcg tagcgctcgt
      541 ggtgccagcg aatgatcggc ttgatgtccc agggaaactc gaccgtcgcg agaagctcca
      601 gaccccatac cgggtgcatc tgaatgacgc ggaactcctc ggccgtgagc gaccccggtt
      661 tgttcaggat ctcgtggggc acccggacct tccccaggtc gtggaggtag gcgccgatcc
      721 ggatcgtggt cttctgctcc tcatccagcc ccagctcggt cgcaaccgca atggcgtagt
      781 cggccacgcg ctcacagtga ccgaaggtgt agctgtccga tgattcgatc gactgacccc
      841 agttccggac caccgcaaag taggtctcct ccagccgaac cactttggtg gaaacgtcca
      901 ccaggtcgac ccgcgcatcc agtcgcccga agagacggtg ggcgctgttg agcagccgaa
      961 gcgcttcctg atttcgcccc atgttctggt agaggagcgc gagctcccgg gacgcctccg
     1021 cctcgctcag gatcgatccg gtactcactg ccagctcaac ggcggaccga agccgcgact
     1081 ccgccagagc attgcggccg gtctcccgat acacccgccc gatcactttg tacgcgtctg
     1141 ccttgtccag acgcgagccc agccggtcga agatcgcgag ggcgctctcg gcattggcgc
     1201 gggcctcctc gtagcgctga cgggcgatgt gcacctcagc gtggttgagc agaccaagtc
     1261 cctggaggtg gacgtctccg atcacttccg ccatctccag cgtgcgggtg aagtagcggt
     1321 cggcgtcatc ccacagctcc cggtcggcgc tcaccatgcc caggttgtga tacgcgatgg
     1381 cgcagccccg ctcatctcca ctgctctcga acgccgcaag cgagcgctgg taatgcgcca
     1441 gcgcctcggc cagccggccc tggatgttgg cgaggatgcc caaattctgt tcggtccggc
     1501 ctcgcagctc ggcgctggcg ccacccagct ccaaggcgcg gtagaatcgc tcccgggctg
     1561 cctcgatctg tccggtctcg aagtcgaatc cggcgagagc attcagcgcc tctgccccga
     1621 ggaccgcgtc ctgaat
//
LOCUS       DASRPQ010002117         3421 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3062373, whole genome shotgun sequence.
ACCESSION   DASRPQ010002117 DASRPQ010000000
VERSION     DASRPQ010002117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3421
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3062373"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..744
                     /locus_tag="VFD73_23980"
     CDS             <1..744
                     /locus_tag="VFD73_23980"
                     /inference="COORDINATES: protein motif:HMM:NF018067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008772 - [isocitrate dehydrogenase
                     (NADP+)] kinase activity [Evidence IEA];
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate dehydrogenase
                     kinase/phosphatase-domain containing protein"
                     /protein_id="HZI77037.1"
                     /translation="FKIIKDSFGAPKNTTRRAVMDKYQFVFVRDRVGRLADAQEFEHL
                     EFPRRCFPDDLLEYLLRVAGSTVRVEGERVVVRHLYTERRVTPLNLFLGSSDQFTAGE
                     AVIEYGNAIKDLAAANIFTGDMLAKNFGVSRHGRVICYDYDELCLLTECQFRRLPEPT
                     SEEEELAAEPWFYVGEHDVFPEEFNSFLVPSGPVREAFLQAHGDLLTVEFWQDVQRRL
                     AEGEIVDVFPYRREARLRRRDDERRQRRG"
     gene            complement(757..1131)
                     /locus_tag="VFD73_23985"
     CDS             complement(757..1131)
                     /locus_tag="VFD73_23985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77038.1"
                     /translation="MTPDRDQAGSTDINDVLNPHRGEEQSRAREHAAEILAGRGVLLT
                     GDETNDELADLWSAVEHFESVVEARGGDTMTNSPDSAEPDNPAFVLPERKARESAGDY
                     ARRIVQAASELTRLERGGPESA"
     gene            complement(1190..1495)
                     /locus_tag="VFD73_23990"
     CDS             complement(1190..1495)
                     /locus_tag="VFD73_23990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77039.1"
                     /translation="MSRAFVNEDAPGGESPRFTLPSRNDPSYELAAARALLQGADLGD
                     TASAEAATGFYWGEPGLRPLVERILEEAREDQNDRLEQLAERFLRASTKLEMKRGAS"
     gene            complement(1593..2348)
                     /locus_tag="VFD73_23995"
     CDS             complement(1593..2348)
                     /locus_tag="VFD73_23995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77040.1"
                     /translation="MAGKRLALLAVALLAGCGRDHAKAIAADSTDRDLQRPSVDANAS
                     FNDRAPQKAPAKSTAKVAAKPAAKAPAKAGAATLARGTAISAKFDDGISSRTHKAGQK
                     LTGTVSSDVKDRSGHVVIPAGSKVHLTIAAIHESENKGDKTGKLVLTPTAVVIRGHTY
                     PLSGSAIALDRTLKDRKTNAGDLAKVGIGAGAGALLGTAVTGGSTKGAVIGGVAGAAV
                     GTQRAIQTQDRDVVVPAHSRLKVTLTTPFRRAV"
     gene            complement(2517..3107)
                     /locus_tag="VFD73_24000"
     CDS             complement(2517..3107)
                     /locus_tag="VFD73_24000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77041.1"
                     /translation="MTEGKRGSGAAGQCTACASLGAARWRIRLGLITLMVGLSVICGW
                     DYLLGEQAVRTTPIREVSPSALADRVRKARGHAVILSLYRPGSEDPYTVADVRRWTVQ
                     SRGHEVEVVAVAVGSRRDAQLLFRYGEDQGMQRLPPEWLNATSAGTLDSVLGHLGVRS
                     GALPITAVFNRSGEVTGQWQGTLDYDTIRSTAKAAR"
     gene            complement(3104..>3421)
                     /locus_tag="VFD73_24005"
     CDS             complement(3104..>3421)
                     /locus_tag="VFD73_24005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HZI77042.1"
                     /translation="NRVIHDAVMESRQSIAGGETIAAPLEKSKVFPPMVISMIAVGEQ
                     TGGLDEMLTKIADFYDEEVDVAVSALLSLMEPVMIVVLGVIVGGMVVAMYLPIFDMMN
                     AVQ"
BASE COUNT          605 a         1094 c         1073 g          649 t
ORIGIN      
        1 ttcaagatca tcaaggacag cttcggagcc ccaaagaaca cgactcggcg tgcggtgatg
       61 gacaagtatc agttcgtgtt cgttcgcgac cgcgtgggcc gactggccga tgcccaggaa
      121 ttcgagcacc tggaatttcc ccgccgctgt ttcccggacg acctgctgga gtatctcctc
      181 cgggtggcag ggtcaaccgt gcgagtggaa ggcgagcgcg tcgttgtccg gcatctctat
      241 accgaacgcc gggtcacccc gctgaatctg tttctgggat cctccgatca attcacagct
      301 ggagaggccg tcatcgagta cggcaacgcc atcaaggatc tggccgcagc caacatcttt
      361 accggagaca tgctggcgaa aaatttcggc gtgagccgcc atggccgggt gatctgctac
      421 gactacgatg agctctgcct gctcacggag tgtcagttcc ggcggctccc cgagcccacc
      481 tccgaggagg aggagctcgc agccgagccc tggttttacg tcggagaaca cgacgtcttc
      541 cccgaggagt tcaactcgtt cctggttccg tcgggtccgg tacgagaggc cttcctgcag
      601 gcacatgggg atctgctgac ggtagagttc tggcaggacg tgcagcggcg gctggccgag
      661 ggggagattg tcgacgtttt tccctatcgc agggaagcgc gcctccgccg ccgagacgac
      721 gagcggaggc aaagacgcgg gtaagcgagt tcggctttag gccgactctg gtccgccgcg
      781 ttccagcctg gtcaactcgg atgcggcctg gacaatccgg cgggcgtagt caccggcaga
      841 ctcgcgcgcc ttccgctcgg gcaggacaaa agcaggatta tcgggctccg ctgaatccgg
      901 gctgttggtc atggtgtcgc cgccgcgagc ttccaccacc gattcgaaat gctcgaccgc
      961 agaccagaga tcggccagct cgtcattggt ttcatctccc gtgagcagga caccacggcc
     1021 ggccagaatt tccgcggcat gctcgcgcgc ccgggactgc tcttcccctc ggtgggggtt
     1081 caggacgtcg ttgatatcgg ttgagccagc ttggtcacga tccggtgtca tagatacctc
     1141 agcaggagtc gccgcaactc tcttgcggcg gattatcgct cgacgaccct caggaggcgc
     1201 ctcgtttcat ttccaacttt gtcgatgcgc ggagaaatcg ttctgccagc tgttccagcc
     1261 ggtcattctg gtcttcccga gcctcctcga gaatccgttc gaccagggga cggagccccg
     1321 gctcacccca gtagaaaccg gtggccgcct cggcgcttgc cgtgtcgcca agatcggctc
     1381 cctgtaggag ggcccgcgcg gctgcgagct cgtaggacgg gtcattccgg gacgggaggg
     1441 taaagcgggg cgactcgccc ccaggggcat cttcgttgac gaacgctcgc gacatgtcct
     1501 gagtatagct cgaaattttc cgtcttgccc gtccccaaaa gacagcgccc cggatggcga
     1561 ggcatccggg gcgcttctag ctgcttaact actcagacag cgcgacggaa cggcgttgtg
     1621 agggtaacct tgagacggga atgcgccggc acgacgacgt cacggtcctg ggtttggatg
     1681 gcccgctggg tcccgactgc ggccccggcc accccaccga ttaccgcacc cttggtgctg
     1741 ccaccggtga ccgcggtccc gaggagagcg cctgctccag caccgatgcc gaccttggcg
     1801 aggtcacccg cattggtctt ccggtccttg agcgtgcgat ccagggcgat agcagagccc
     1861 gacagcggat aggtgtgccc gcggatcacg acagcagtag gcgtgagcac cagcttgccg
     1921 gtcttgtcgc ccttgttctc tgattcgtga atggccgcga tggtcaggtg caccttggac
     1981 ccggcgggaa tcaccacatg cccgctcctg tccttcacat ccgaggacac ggtgccggtg
     2041 agcttctggc cggccttgtg cgtccgggag ctgattccgt catcgaactt ggctgaaatc
     2101 gctgttcccc tggccagggt cgcggcgcca gccttggctg gggctttcgc cgccggcttg
     2161 gccgctactt tggcggtgga cttcgccggg gccttctggg gagcccggtc gttgaacgag
     2221 gcgttggcat ccaccgaagg ccgttgcaga tcgcggtccg tgctgtccgc ggcgatcgcc
     2281 ttagcgtggt cgcggccaca cccagccaga agggctaccg cgagtaatgc cagtcgttta
     2341 cctgccatgg tacccctccg gaactattgg actggattga agatcgggat gcagacgggc
     2401 caggtgaggg caattccaag gccaggcaag cggcagcggg gcagcggggc agcggggcag
     2461 cggggcagcg gggcagcggg aaccgtaatg gaacagccga ggtgccccgg ttgcctctat
     2521 cgcgcagctt tggcggttga acgaatggtg tcgtagtcca gagtgccctg ccactggccc
     2581 gtcacttctc cgctgcggtt aaacacggcg gtaatcggca gtgctccact ccggactccc
     2641 aagtggccca gcacactgtc cagagtgccg gccgaagtcg cattgagcca ttcgggaggg
     2701 agtcgttgca tgccctggtc ctctccgtac cggaacagga gctgcgcgtc gcggcggctg
     2761 ccgactgcca ccgcgacgac ctccacctca tggccgcggc tctggaccgt ccaacgccgc
     2821 acgtcagcca cggtataggg atcttcggag ccaggccggt acagcgacaa aatcaccgca
     2881 tgtccacgcg ctttccggac gcggtccgct agagcggaag ggctgacttc ccttattgga
     2941 gtcgtccgga cggcctgttc accgaggaga tagtcccagc cgcagatcac gctgagacca
     3001 accatcaggg tgatgagtcc cagcctgatt ctccatctcg ccgcgccgag agatgcgcaa
     3061 gcagtgcact gccccgctgc cccgctgcct cgcttaccct ctgtcattgc accgcgttca
     3121 tcatgtcgaa gatcggcaga tacatcgcca ccaccatgcc gcccacgatg acgccgagca
     3181 ccacaatcat taccggctcc atgagcgaca gcagcgccga cacggcgacg tcgacctctt
     3241 catcgtagaa atccgcgatc ttggtgagca tctcgtccaa accaccggtc tgctcgccca
     3301 cggcgatcat cgagatgacc atcggaggaa agactttgga cttttccaga ggagcggcga
     3361 tcgtttcacc gcccgcgatg gattgccgtg actccatgac tgcgtcgtga ataaccctgt
     3421 t
//
LOCUS       DASRPQ010002118         2866 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2789883, whole genome shotgun sequence.
ACCESSION   DASRPQ010002118 DASRPQ010000000
VERSION     DASRPQ010002118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2866
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2789883"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..900
                     /locus_tag="VFD73_24010"
     CDS             <1..900
                     /locus_tag="VFD73_24010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77043.1"
                     /translation="RYWDSGPVLHARIGSEFGDTMPGVQFAVRERGRLFDVLEKPMKV
                     VVCRRNNCREFYRELPVRLPERNERSVAITGGWSTAFTKRAVTSRDKSVLLKEALNHA
                     VWNLQAELATGRVNARLQGFYGSDERGGSLDVSREIKRIGEGMSYGLAMHVGATHTEW
                     LPTDRSSVLSKATAYRASIGPSIMIKGLTASSQIGIYTDGQETLQEVSTFLSLNGGLT
                     EVRSPVTVTVEKTFAFGGEPMIPRRQDQLERLTVGVDLVHNFALRLGMTTHRSAWPTQ
                     NEASDLRASEIYYTLGGQYTISW"
     gene            1171..2061
                     /locus_tag="VFD73_24015"
     CDS             1171..2061
                     /locus_tag="VFD73_24015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZI77044.1"
                     /translation="MAGTKKTRRRSARPAALARAVDEGRESLDFYLKEISRIPLLTVQ
                     EETALARRAFRGDLEAQERLARHNVRFVVSVAKKFQNRGVPLMDLIGEGNVGLMTAAR
                     KFDPDRGVKFISYAVWWIRQAIQAAIARHGRPVRLPLNRTADLTRLGRVTTLLTEKLG
                     RVPTTEELVAATGLTPEAVRSLGALHIEALRLDQPIREGEDRGRLDRFVPLTQDGTDA
                     STLANSRTHDLEVALAALPPRDAKVLRLYFGLDDGNSRTLEEIGRMMGVTRERIRQLR
                     DRALRQLKEEHGDKLRELAA"
     gene            complement(2159..>2866)
                     /locus_tag="VFD73_24020"
     CDS             complement(2159..>2866)
                     /locus_tag="VFD73_24020"
                     /inference="COORDINATES: protein motif:HMM:NF014342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHHA1 domain-containing protein"
                     /protein_id="HZI77045.1"
                     /translation="EEASEAIALRKRPARTGTIRIITIQQLDRSACGGTHVRATGEIG
                     PIFIRKIERARGAMRLEFVCGGRAVARARSEYDLLSDLSSAFSVAPHELPGLFASQRA
                     ELKDAHSAKRDLEREVSRYRARELYRSASPDAGGMRRVIAREGLGSLDEVRRIAQEFV
                     TLPLVMFVGAVPAPPGIVLAVSPDSGINAANVLKGLLSAVNGRGGGSATLAQGVVPSV
                     SELEQVLAAVGAAQSKA"
BASE COUNT          565 a          883 c          907 g          511 t
ORIGIN      
        1 cgatactggg actcgggccc cgtgctgcac gcccgcattg gaagtgaatt cggcgacacc
       61 atgcccgggg tccagttcgc cgtccgcgag cggggccgat tgtttgacgt gctcgagaaa
      121 ccgatgaagg tcgtggtgtg ccgcaggaac aactgccgag agttctaccg ggaattgccg
      181 gtgcggctgc ccgaacggaa cgagcgctct gtagcgatca ctgggggctg gagcacggcg
      241 ttcaccaaac gtgcagtcac cagccgggac aaatcggtgc ttctcaaaga agcgctgaac
      301 catgcagtct ggaatctcca ggcagagctc gccaccggtc gggtcaacgc tcggttgcaa
      361 gggttctatg ggtccgacga gcggggtggt tccctggatg tttccaggga gatcaagcgg
      421 attggcgaag gcatgagcta cgggctggcc atgcacgtgg gcgcgacgca tacagagtgg
      481 ctccccaccg atcgcagctc ggtcctgtca aaagcgacgg cgtaccgcgc gagcatcggc
      541 ccgagcatca tgatcaaagg cctgaccgcc agctcccaga tcggcatcta taccgatggc
      601 caggaaacac tgcaggaggt cagtaccttc ctctcgttga acggggggct taccgaagta
      661 cggagtcccg tgactgtcac cgtggaaaaa accttcgcct tcgggggtga gccaatgatc
      721 ccccggcgcc aggatcaatt ggaacgattg accgtgggag tggacctggt gcacaacttc
      781 gcccttcgtc tcggcatgac cacccaccgg agcgcctggc cgacccagaa tgaagccagc
      841 gatctcaggg ctagcgagat ctactacacc ttgggtgggc agtataccat aagttggtga
      901 gcagcataaa gttgcagcga agggcctaga caaaaaatcg ttacccccgc agcgggtcac
      961 aggccgagcc ggcaccaggg ctcggccttc gtgttttgca tgtgccctgc gaccggccaa
     1021 gcgtctcagg cagtatgtat gaggactggc agtgatccgc tgactagcta ccggccgggc
     1081 gggaaccgct cgggcgagcc aggtgttagg tcaaagagtc agcggcgttt atgacccgcg
     1141 gcagcgggca acctgaaatg gagcaggaca gtggcaggaa ccaaaaagac tcgtcggcgc
     1201 tcggcccgcc cagccgccct tgctcgggcg gtggatgagg gacgggagag cttggatttt
     1261 tatctcaagg agatcagccg gattcctctg ctgactgtgc aggaagagac ggccctagct
     1321 cggcgtgcgt tccggggaga cctcgaggct caggagaggc tggcccggca caacgtccgc
     1381 ttcgtcgtgt cggtcgccaa gaagttccag aatcgtggcg taccgctcat ggatctgatt
     1441 ggggaaggca acgtcgggct catgaccgcc gctaggaagt tcgatcccga tcggggcgtc
     1501 aagttcatct cctacgccgt ctggtggatc cgtcaggcga tccaggctgc gatcgcgcgg
     1561 catgggcggc cggttcggct gccgctcaac cggacggctg acctgacccg actgggccga
     1621 gtgacgacct tgctgaccga gaagcttggg cgcgttccca cgaccgagga actggttgcc
     1681 gcaacagggc tcacgcccga ggcagtgcgg tccctgggcg cactccacat cgaggcgttg
     1741 cggctcgacc agccaatcag ggaaggggag gatcgggggc gtttggaccg gttcgtcccg
     1801 ctgactcagg acggtactga cgccagcacc ctcgcgaaca gccggaccca cgatcttgaa
     1861 gtcgcattgg cggcgttgcc tccgcgagac gccaaggtgc tgcgactcta tttcggtctg
     1921 gatgacggaa acagccgcac gctggaggag atcggtcgca tgatgggcgt aacccgggaa
     1981 aggattcgac agcttcgaga ccgggcgctg cgccagctca aggaagagca cggcgacaag
     2041 ctccgcgagc tcgccgcgta acagaaggcc cgcgtaatag aaggccccgt tctcgacgaa
     2101 cggggccttt cgtttccgta ttctcccaac cctgctcggt ttcaccggcc tcagtcgtct
     2161 acgcttttga ttgcgccgct cccaccgccg caagcacctg ctccagctct gatacgctcg
     2221 gtacgacgcc ttgcgcgaga gttgccgatc ccccaccccg accattgact gcggagagca
     2281 gacctttcag aacgttggcc gcattgattc ccgagtccgg actaacggcg agaacgatcc
     2341 ctggtggagc gggcaccgct ccgacgaaca tcaccagcgg cagcgtgacg aactcctggg
     2401 cgattcttcg aacctcatcc agggacccga gaccttcccg ggcgatcact ctgcgcattc
     2461 ctccggcatc gggcgatgct gaccggtaga gctcacgggc tcgataccga ctcacttcgc
     2521 gttccagatc tcttttagcg gagtgtgcgt ccttcagctc agcccgttga ctcgcgaaca
     2581 gccccggaag ctcatgaggt gcgacggaga aggctgaact cagatcagag aggaggtcat
     2641 attcgctgcg ggctcgagcc acagcgcggc ccccgcacac aaattccaat cgcatcgccc
     2701 ctcgggctcg ctcgattttc ctaatgaaaa tgggcccgat ctctcccgtc gcccgcacat
     2761 gggttccccc gcaggcactg cgatcgagct gctgaatggt aatgatgcga atggttcccg
     2821 tccgggctgg ccgctttcgg agagcaatgg cctcagaggc ctcctc
//
LOCUS       DASRPQ010002119         1294 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1180366, whole genome shotgun sequence.
ACCESSION   DASRPQ010002119 DASRPQ010000000
VERSION     DASRPQ010002119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1294
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1180366"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..210)
                     /locus_tag="VFD73_24025"
     CDS             complement(<1..210)
                     /locus_tag="VFD73_24025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77046.1"
                     /translation="MSGVEQAPTTGFSLVLTGRAAEEVQKFISQEQVPVESAGLRVSV
                     LPGGCSGFKYSLNIEERPLEDDMVSE"
     gene            complement(237..>1294)
                     /locus_tag="VFD73_24030"
     CDS             complement(237..>1294)
                     /locus_tag="VFD73_24030"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77047.1"
                     /translation="PGAEPGGGGYVAQRILAAKDERHGLMATLWFQIANYAVRPWPWI
                     LVGFVAVLKYPGLAKPEEGYVRVMVDVLPSPIKGLLLATFAAAYMSTIGTHLNWGASY
                     LVNDVYLRFIRPEATRRAQIIASRIATVTLMLLSLLVMAYLQSVEQGWKILIGLGAGT
                     GAVFILRWYWWRVNAWSEISAMAASFVTSIALHVAGIDSANTSNSDYAVAMLVTVGIT
                     TLVWIGVTFFTAPESAAVLDRFYRRVRPGGPGWRNVSQRLGFGDDRIPGGALSFVNWI
                     AGVVAVYTALFGVGAFLTGSTRQGLVYMIVATIAFTLIMRNLRAEDRLAAGVDRTART
                     GLELSHRVDANRVDLRS"
BASE COUNT          273 a          413 c          389 g          219 t
ORIGIN      
        1 ttcggaaacc atgtcgtctt ccaggggccg ctcctcgatg ttcaggctgt acttgaaccc
       61 agagcacccg ccaggaagga cactgacgcg cagaccagcg gactccaccg ggacctgctc
      121 ctggctgatg aacttctgta cctcctcggc ggctcggccg gtgaggacca gggagaatcc
      181 ggtggttggc gcctgctcca caccgctcat tctacaactc cttggatcag tttcgtttac
      241 gagcgtaggt cgactcgatt cgcgtcaact cgatgagaca attctaagcc ggtgcgcgcc
      301 gtcctgtcaa cgccggcggc gagccggtcc tcggctcgca agttacgcat tatcaaggtg
      361 aaagcgatgg ttgccacgat catgtagacc agcccttggc gagtggaacc ggtcaagaag
      421 gcgcccactc caaacagggc agtgtacacc gccaccactc cggctatcca gttgacgaaa
      481 gacaacgcac cccccgggat ccggtcgtcc ccgaagccca ggcgctgcga gacatttctc
      541 cagccagggc caccgggccg aacccggcgg tagaatcgat ccagcacggc ggccgattcc
      601 ggagcggtga agaaggtcac gccgatccac accagagtag tgatccccac cgtgaccagc
      661 atcgcaacgg cgtaatcgct gttcgaggta ttggcggagt cgatgccggc gacgtggagc
      721 gcgatggagg tcacaaagga ggcagccatc gcactgatct cggaccatgc gttcacccgc
      781 caccagtacc agcgaaggat gaagaccgcg ccagtgccgg cgcccaggcc gatcagaatt
      841 ttccagcctt gctcgacgct ctgcaggtaa gccataacca agagcgagag gagcataagc
      901 gtgacggtcg ctatccgcga tgcgatgatc tgggctcgcc gggtcgcttc gggacggatg
      961 aagcgcagat agacgtcgtt gaccagatag gacgcacccc aattgagatg ggtcccgatc
     1021 gtactcatgt aggccgcggc gaacgtggcg agcagaaggc ccttgatggg tgagggtagc
     1081 acgtccacca tcacccgcac gtaaccctcc tctggtttcg ccagcccggg gtatttgagc
     1141 accgcaacaa accccaccag aatccagggc cagggacgca cggcatagtt ggcgatctga
     1201 aaccagagcg ttgccatgag cccgtggcgc tcgtctttgg ccgcgagtat ccgctgcgcc
     1261 acgtagcctc cgccgcccgg ttcggcaccg ggat
//
LOCUS       DASRPQ010002120         1104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_555931, whole genome shotgun sequence.
ACCESSION   DASRPQ010002120 DASRPQ010000000
VERSION     DASRPQ010002120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_555931"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(116..>1104)
                     /locus_tag="VFD73_24035"
     CDS             complement(116..>1104)
                     /locus_tag="VFD73_24035"
                     /inference="COORDINATES: protein motif:HMM:NF019643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="BBE domain-containing protein"
                     /protein_id="HZI77048.1"
                     /translation="VGIVGYTLGGGQSPLLGRLYGYAADHVRRVNIVTADGELRNVTA
                     ESEPELFWALRGGKGNFGVVTEIEFGLFPVARFFGGGIYFPGERLADVLEAWRTWLPT
                     IPEEMTSSVAIQRLPDVPLLPEPVRGAFVVHLRIGYLGPATEGEKLVAPLRVAAPPLL
                     DLLEDKPVSAVGEIHMDPVDPMPYVDRTVSLGELTTETVKALVEFAGPSSGCPLASVE
                     IRSLGGAFDREPAVANAVSTRGVPFVVFGAGVGGPERSVALRECLAKVMDALAPWAVE
                     QKMVNFLSPDEATSPESVRAVYGPQRYDRLAAVKSRFDPSNVFRFNHNIIPA"
BASE COUNT          216 a          385 c          317 g          186 t
ORIGIN      
        1 atggaccgga tgatggtcct ccactacatg actaccgact gcaactttct ctacacgacg
       61 ttacctgcga atagccctgc gaggcatgtc cagacttgat caccatccga gagtgctaag
      121 ccgggataat gttgtggttg aagcggaaaa cgttcgacgg gtcaaaccgg ctcttcaccg
      181 cagccagcct gtcgtagcgc tggggtccgt acaccgcgcg cacgctctcg gggctcgtcg
      241 cctcgtccgg tgacaagaaa ttgaccatct tctgctccac ggcccacggt gccagcgcgt
      301 ccatcacctt ggccagacat tctctcagcg caactgagcg ctctggaccg cccactcccg
      361 ccccgaagac gacgaagggc acgccacggg tggacaccgc gttggcgacc gcaggttcac
      421 ggtcgaaggc tccgcccaat gagcgtatct ccacgctcgc gagcggacag ccagaggacg
      481 ggccggcgaa ctcgaccagc gccttgacgg tctcggtagt caactcgccc aacgagacgg
      541 tcctgtccac atacggcatc ggatccaccg ggtccatgtg gatttcaccc accgcgctta
      601 ctggcttgtc ttccagcagg tcgagcagcg gcggcgcggc cactcggagc ggggcgacca
      661 gtttctcacc ctcggtcgct ggccccaggt atccgatcct caagtgcacc acgaacgcgc
      721 ctcgcactgg ctccggcagc agcgggacat cgggtaggcg ctggatagct accgatgagg
      781 tcatctcctc gggaatggtg ggcagccacg tgcgccacgc ctccagcacg tcggccagcc
      841 gttcacccgg aaaatagata ccgccgccga agaagcgggc caccggaaag agaccgaact
      901 cgatctcggt caccacaccg aagttcccct tgccgccccg caatgcccag aacaactcgg
      961 gctcgctctc ggcagtcaca ttgcgcagtt cgccgtccgc tgtcacgatg ttcacccggc
     1021 ggacgtggtc ggcggcataa ccatacagac ggccgaggag cgggctttgc ccgccaccga
     1081 gggtataccc gactatccct actc
//
LOCUS       DASRPQ010002121         1717 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2153361, whole genome shotgun sequence.
ACCESSION   DASRPQ010002121 DASRPQ010000000
VERSION     DASRPQ010002121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1717
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2153361"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1717
                     /locus_tag="VFD73_24040"
     CDS             <1..>1717
                     /locus_tag="VFD73_24040"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HZI77049.1"
                     /translation="ILCDNEGQLERMEELLDPALAVGGGRFLPNNATLAIGALDGGFV
                     MPTLRVLTDHEIFRRARRLRRPRRYREAAPSSATGALTLGDYVVHLEHGIGIYRGIET
                     ITAGEATLEVAVVEYEGGDRLNVPLYSLDQLERYRAAGEDGDRPPPRIHRLGGSSWQR
                     VREKTRQAIKQMAAELLDLYARRTVSSGYPFPPDTRWQRELESSFLYEDTPDQRRATE
                     EVKRDMEQPLPMDRLLVGDVGYGKTEIAVRAAFKAVQAGKQVAVLVPTTILAEQHGRT
                     FIERLADFPVRIEVLSRFRTAKEQKGALQRLASGQIDVVIGTHRLLSKDVVFHDLGLL
                     VVDEEHRFGVKHKERLKALRLSVDVLTLTATPIPRTLHLSLAGLRDLTLIETPPRDRS
                     PILTFVEPWDDALLEEAFAREIDRGGQVFAVHNRIETIDTVAARVRSLAPNARVEVAH
                     GQMPAERLEEVMRCFVAGEVDILVSTMIVESGLDVPNANTMVVHDAHRFGLAQLYQLR
                     GRVGRSHRRAYCYLLVPDMIDADAEERLRVLEHHTDLGAGYRIAMKDLEIRGAGNLLG
                     AEQSG"
BASE COUNT          314 a          545 c          553 g          305 t
ORIGIN      
        1 tcatcctctg cgacaacgaa ggtcagctcg agcggatgga agagctcctg gaccccgctc
       61 tggcggtcgg aggcggccgg ttcctgccga acaatgccac tctcgcgatc ggcgcgctgg
      121 acggtgggtt cgtcatgccc actcttcggg ttctcaccga tcacgagatc ttccgccgcg
      181 ctcgccggct tcgccgtccc agacgatatc gagaagccgc gccctcgtct gccaccggcg
      241 cactgacgct gggtgattat gtggtgcatc tggagcatgg catcgggatc tatcggggca
      301 tagaaacgat cactgcgggt gaggctactc tcgaggttgc ggtcgtcgaa tacgaaggag
      361 gcgaccggct caacgttccg ctctacagcc ttgatcaact ggagagatac cgggccgccg
      421 gcgaagatgg ggaccggccg cctccacgga ttcaccgtct cggcggatcc agctggcagc
      481 gggtccggga gaagacccgc caggccatca agcagatggc ggccgaactg ctcgacttat
      541 acgcccggcg gacggtcagc agcggctacc cctttccacc agataccaga tggcagcgcg
      601 agctcgagtc cagttttctc tacgaggaca ctccggacca gaggcgcgcg accgaagaag
      661 tcaaacggga tatggagcag ccgcttccga tggaccgctt actggtagga gacgtcggat
      721 acggcaaaac cgagatcgcg gtgcgcgccg ctttcaaggc ggtgcaggcg gggaaacagg
      781 tcgcggttct ggtccccacc accattctgg ccgagcagca cggccgcacc ttcatcgagc
      841 ggctggcgga cttccccgtt cggatcgaag tcttgtcccg gttccgcact gccaaagagc
      901 agaagggggc actgcagcgc ctcgccagcg gtcagatcga cgtggttatc ggcacccacc
      961 gactgctctc gaaggacgtg gtgttccacg acctgggtct gctggtggtg gacgaagagc
     1021 atcgcttcgg ggtcaagcac aaggaacggc tgaaggccct gcgactctcc gtcgatgtgc
     1081 tgaccctgac cgcgactccg attcctcgga ccctgcatct ctccctggcg gggctgcgcg
     1141 atctgaccct gatcgaaacg ccaccccgcg atcgctctcc catcctcacc ttcgtcgagc
     1201 cgtgggacga tgccctgctg gaggaagcct tcgcccgcga gatcgatcgg ggtgggcaag
     1261 tctttgcggt gcacaaccgg atcgagacca tcgacaccgt cgctgcccgg gtccggtcgc
     1321 tggccccgaa tgcccgagtc gaggtggccc atggccagat gccggcggaa cggctggaag
     1381 aggtcatgcg ctgctttgtt gcgggtgagg tcgacatcct ggtctccacg atgatcgtgg
     1441 agtccggact cgatgtgccc aacgccaata cgatggtcgt acacgatgct caccggttcg
     1501 gactggccca gctgtaccag cttcgcggcc gggtcggccg gagtcaccgt cgggcctact
     1561 gctatctgct ggtgcccgac atgatcgacg ctgacgccga ggaacggctc cgggtgctcg
     1621 agcatcatac tgatctgggt gccggttacc gcatcgcaat gaaagatctg gaaatcaggg
     1681 gagcgggaaa cctgctcggt gccgagcaat cgggcca
//
LOCUS       DASRPQ010002122         2132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1841330, whole genome shotgun sequence.
ACCESSION   DASRPQ010002122 DASRPQ010000000
VERSION     DASRPQ010002122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2132
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1841330"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            915..1226
                     /locus_tag="VFD73_24045"
     CDS             915..1226
                     /locus_tag="VFD73_24045"
                     /inference="COORDINATES: protein motif:HMM:NF016141.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HZI77050.1"
                     /translation="MNIGSFLAACALGFVAGAIARALIPNDAFRHMHGVRSWLTSLGL
                     GLLGALVGFWVFHGIFGIGDTDKFDWGGIVGAVIGAMIVVAVASFLIKRFAKRQMAGQ
                     S"
     gene            1754..>2132
                     /locus_tag="VFD73_24050"
     CDS             1754..>2132
                     /locus_tag="VFD73_24050"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI77051.1"
                     /translation="MVTETRATQPSGRNVLEDLDSRIPTNYYWYLAVLACVGGFLFGY
                     DTSNIGSALGFIPYHLSSFWTGYLVAGASLGAGAGALIAGPLTDHFGRKTLLVSDAAI
                     YAIGALLSAFTVNAFMLLSSRTLI"
BASE COUNT          380 a          685 c          685 g          382 t
ORIGIN      
        1 ttccagcaca agcttgtctg ggtgtgcggc tccgacttcc agcaagcgcc tggtcaggga
       61 ggttcccgtg gcaatgtcca actccccggt caccgtgacc gtggctacca cgccatccca
      121 cgagacgtct acctgaagcg ctgaagcagg gttgcgttcc accttgttca tcccttccgg
      181 gaagctcgta ctggcccacg ggaagaaccc atccacggca agggccagcc agcgggaatc
      241 tccacacggc tacccgtcac gaccttcccc cagcccgatt ggcgttggcc atgacctgct
      301 tgtcggcacc ccgcatcacc ccgacgaaga ccggaaacgc ggtggcgtgt tgcactgcga
      361 tcctcccctc ccctccgccg ctggcccagc ggccgtgacg acagcgggcc agacctgggt
      421 gaaggccagt tgcagaccgt gtggaggtca catgaaaggc cgtacccgaa ggctgactgc
      481 tgcccaggcc accggaccgg accgcgggct gtgacaccga cggctgacac caacagggtg
      541 gaccccatga ccctcgatcc gacatgcgca cgctattggc gcaggtaggc aacacaaatg
      601 caccggatgt catcggcggc acccagtttg cgaaggaacc ggccggcatc gattggatga
      661 agccctatcg tgcaggcccg gcgcgtagcc gatgtcatgt agccatgccg ctgccacaag
      721 aacctgtcca gccacaccgg ggatcgctga caaccgctct gcccgagcgg ctaccgcctg
      781 aacatgttgc cacctgtgat gcggtgaagc gcccaccagc cccgagttaa gtaaagccgg
      841 ggcaatccct tgatctagcg ccggcaatca ggcatcgcta aaatgagcca ggggcctggg
      901 gatcggaggg gtctgtgaac atcggtagtt ttctcgccgc ctgtgcgctg ggctttgtag
      961 ccggggccat cgctcgcgct ctgataccca acgatgcctt ccggcacatg cacggcgtaa
     1021 ggtcgtggct gacctcgctg ggactgggcc tgctgggggc gttggtcggc ttctgggtct
     1081 tccacggcat atttggcatc ggcgacacgg acaagttcga ctggggcggc atcgtcggcg
     1141 cggtgatcgg cgccatgatc gttgttgccg tcgcgtcgtt cctgatcaag cggttcgcaa
     1201 agcgtcagat ggctggtcaa agctgatctt gctaacaggg tttgctaaca acggacctgg
     1261 acggcgctgg atacagccgg aatggatcac ggtcagcagg cagcgcgagc aggcttgtcc
     1321 gacagctgtg accgccgcag gacgaccggg atcttgatac ggatcagaag gcgatcctgg
     1381 ccctagaggt ggctctacag tggccctagg gcacctgggt gaataggggt aagccgaggg
     1441 aaatgtgtag gttcggcgcg ctcgggtcac actgagcgat ctcgcccggc tcatgcgcgg
     1501 tgcgggacgc caggtccggc ggcaagtaag ccgggcgcag ctcagccacc cggtcacttg
     1561 atgcaagacg ctggacagtt cagcgtgtgc acctcgtcaa ctcctgcgcg cccgcggcat
     1621 cgacacggcc ggccagccgc cacctagcgt ttgctgcccg tacacctggg tagcgggcac
     1681 ggcggttggc ctgagcgtgg cagttcgatg gcgcgggctt ggcgactgga gaggaatcga
     1741 ggagggcctg cagatggtga ccgagacgag agccacacag ccgtcagggc gcaatgtgct
     1801 cgaggatttg gattcgcgta tccccacgaa ctactactgg tatctggccg tgctggcctg
     1861 cgtcggcggg ttcttgttcg ggtacgacac gtccaacatc ggctcagcgc tgggcttcat
     1921 cccttaccac ctgtcaagct tctggaccgg gtacctcgtg gcaggcgcat ccctgggcgc
     1981 tggcgcggga gcgctgatcg ccgggccgct gaccgaccac ttcgggcgca agaccctgct
     2041 cgtcagcgac gccgccatct acgccatcgg cgcgctgttg tcggcgttca ccgtgaacgc
     2101 gttcatgctg ctgtcctccc gcacgctcat cg
//
LOCUS       DASRPQ010002123         1057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1841364, whole genome shotgun sequence.
ACCESSION   DASRPQ010002123 DASRPQ010000000
VERSION     DASRPQ010002123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1841364"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1057
                     /locus_tag="VFD73_24055"
     CDS             <1..>1057
                     /locus_tag="VFD73_24055"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI77052.1"
                     /translation="EAVEFLCWRTGADEPKAAAELAVELGDLPLALAQAAAYIDTHSM
                     TISRYLESYRDPMLARRLRDAGLDSTEYPASVARTWLLNFMQLSAEHPTAVELLRLCA
                     FLDPDDIDLDLLSTGREETGEVLARVLGNQLERAETAGSLAATSLATVPAEDHLRVHR
                     LVQAVTRDQLGDDQAAMWSMRALSLVAANLPSAPADYRSWPMYAKLAPHIEATARHAN
                     SYSILAESIGILRDLGIYLSASGQLRAARTTFERVLAICRAAHGPEHSETAKALGNLA
                     GAQLRLWELRDARASIDLALSALKGIYGPDHPDVAKALGHLGIIELRLGKMQDARASI
                     ERGLAINEQAYGPDHPEV"
BASE COUNT          192 a          323 c          339 g          203 t
ORIGIN      
        1 gaggcagtgg agttcctctg ttggcggact ggggccgatg agcccaaggc tgccgcggaa
       61 ctggcagtcg agctgggtga tcttccgctg gcgctggcac aggctgccgc ctatatcgat
      121 acgcactcca tgacgatcag taggtacctg gagtcctacc gtgacccgat gctggcgcgc
      181 cggttgcgtg atgctggcct ggattcaacc gaataccctg cgagcgtggc ccggacatgg
      241 ctgttgaatt ttatgcagct gtctgctgag cacccgaccg cagtggagct acttcggctg
      301 tgtgcgttcc tcgatccgga cgacatcgac ctggatcttc tgagtacagg cagggaagaa
      361 accggcgaag tgcttgcccg ggtgctcggt aatcaactgg agcgcgctga gacggcagga
      421 tccctagcag caactagcct ggccaccgtc cctgctgaag accacctgcg ggtgcaccgg
      481 ttggtgcagg cagtgactcg tgaccagctt ggtgatgacc aggccgccat gtggtccatg
      541 cgggcgctca gccttgtcgc agctaacctg ccctctgcac cggctgacta ccgatcctgg
      601 cctatgtacg ccaagttggc gccgcatatt gaggcgaccg ccaggcatgc gaacagttat
      661 tcgattctgg cggaaagcat tggtattctg agggacctgg gaatttacct ttcggcatcg
      721 ggccaactga gggcagcccg cactacgttc gaacgcgtct tggccatttg ccgagcagct
      781 cacggtccgg agcattcgga gactgccaag gccctcggta acctggccgg agcccagctg
      841 cgtctgtggg agctgaggga tgcccgggcc agcatcgacc ttgccttgtc ggccctcaag
      901 ggaatctatg gccctgacca tcccgacgtc gccaaggcgc ttgggcatct gggcatcatc
      961 gagctgcggt tggggaagat gcaggacgcc cgagccagca tcgagcgcgg cctggccatc
     1021 aacgaacagg cctacggccc cgaccacccc gaggtcg
//
LOCUS       DASRPQ010002124         1633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2790806, whole genome shotgun sequence.
ACCESSION   DASRPQ010002124 DASRPQ010000000
VERSION     DASRPQ010002124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1633
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2790806"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            69..>1633
                     /locus_tag="VFD73_24060"
     CDS             69..>1633
                     /locus_tag="VFD73_24060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77053.1"
                     /translation="MLKRAAPLLVCLLTVPALLNAQYFGRNKVQYSTFDFKVIQTEHF
                     DVYYYERERVAAMDAARMAERSYARLSKVLNHDFRERKPIILYASHSDFQQTNALGEQ
                     PSEGTGGVTDFQRNRAVMPFTGSYAELEHVLQHEMTHQFQYDTWSRGRAGGGIATIVA
                     INPPLWFAEGMAEYLSLGPINPETAMWLRDASLEGNLPSIEQMTLDPYKYFPYRFGHA
                     LWSYIGERWGDEAVGAILKSTLAGGIEGAFRRTIGLTLDQLSDQWRDAVQKKYLPEIG
                     ARAKARAVAEELLTEKRSQGTLHLAPALSPDGSQVAYFSEKDFYFVDLYLADGNSGKV
                     KRRILKSGVSSNYETYRFINSQANWSPDGKYLAFAAKRGGRDDIVIVDVARNKEVKRI
                     DVKLSGVTTPSWSPDGQQLVFTGYDGGLSDLFVVRRDGSNLRRLTEDKYADLHPVWSP
                     DGHTIAFATDRGGKTDFKTLNIGNFRIALYDLDTGSIQVLDQMDQGKNVSPQWSPDGN
                     SIAFVSDRNGVSN"
BASE COUNT          333 a          521 c          479 g          300 t
ORIGIN      
        1 taccagctcg agcggctatg gcacgacgcc cccgagctgc tgatcagctc atctctatag
       61 aggctgctat gctgaaacgc gccgccccgc tgcttgtctg cctgctgaca gtgccagcgc
      121 tcctcaacgc gcagtacttc ggcaggaaca aggttcagta cagcacgttc gatttcaagg
      181 tcattcagac cgagcatttc gacgtttact actacgagcg tgagcgggtc gcggcgatgg
      241 acgccgcgcg gatggcggag cgatcctatg ccagactctc caaggtgctg aaccacgact
      301 tccgcgagcg gaagccgatc attctctacg cctcccactc cgatttccag cagaccaacg
      361 ccctgggaga gcagccgagt gaagggaccg gcggcgtcac cgacttccag cgcaatcgag
      421 cggtcatgcc gtttaccggc tcgtacgccg agctggagca cgtcctgcag cacgagatga
      481 cgcaccagtt ccagtacgac acctggtccc gcggtcgtgc ggggggcggg atcgccacca
      541 tcgtcgcgat caacccgccg ctctggttcg ccgaaggaat ggcggagtat ctctcgcttg
      601 gccccatcaa tcccgaaacc gctatgtggc tccgggacgc ctccctcgaa gggaacctcc
      661 cgagcatcga gcagatgacg ctcgatccgt acaaatactt cccctatcgg tttggccacg
      721 cgctctggtc ctatatcggc gaacgttggg gtgatgaagc agtcggagcg attctcaagt
      781 ccaccttggc cggaggcatc gagggtgcct ttcgccgcac catcggcctc actctggatc
      841 agctctccga tcagtggcgt gacgcggtgc agaagaagta cctccccgag attggcgctc
      901 gggccaaggc ccgggcggtg gccgaggagc tcctgaccga gaagcggtcg caaggcacgc
      961 tgcatctcgc ccccgcgctc tcgcccgatg gctctcaggt agcctacttc agcgagaaag
     1021 acttctactt cgtcgatctg tatctggccg acggaaacag cgggaaagtg aaacggcgga
     1081 tcctcaaatc cggcgtgagc agcaactacg agacctaccg gttcatcaat tcccaggcga
     1141 actggtcacc cgacgggaag tatctcgcct ttgccgcgaa gcgaggtggc cgcgatgaca
     1201 tcgtcattgt cgatgtcgcc cggaacaagg aggtcaagcg catcgatgtg aagctgagcg
     1261 gggtcaccac cccctcctgg agcccagacg gtcagcaact ggtgttcact gggtatgatg
     1321 gtgggctgag cgatctgttc gtggtccggc gcgacggcag caaccttcgc cggcttaccg
     1381 aggacaaata cgccgacctg catccggtct ggtcacctga tgggcacacc atcgccttcg
     1441 ccaccgaccg gggcgggaag accgatttca agacgctaaa catcggcaac ttcagaatcg
     1501 ctttgtatga tctggacacc ggctccatcc aagtcctgga tcagatggat cagggcaaga
     1561 acgtgagtcc ccaatggtca cccgacggca actcgatcgc cttcgtgtcc gaccgcaacg
     1621 gggtcagcaa cat
//
LOCUS       DASRPQ010002125         1617 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_556987, whole genome shotgun sequence.
ACCESSION   DASRPQ010002125 DASRPQ010000000
VERSION     DASRPQ010002125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_556987"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..752)
                     /locus_tag="VFD73_24065"
     CDS             complement(<1..752)
                     /locus_tag="VFD73_24065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77054.1"
                     /translation="MLAYGFTALAVGVSVGIMLALRSAGVGSDAASALLLAVVVGFLY
                     GGLGPGVFALALSGLIARDAGMVAIGAILGVVCEIFRRAVLRSRVTVEPMDQEEAVPR
                     PVSPSPFEGRTGRQLPEVESATPPLREVTTEATWRFHHTQPLDITLPEDEQIEHLYLY
                     SVLAECNDAFARMYGFRTAADVVGTQLVVFLSPSNPANVEYLRSFIRSGYRLEDANSQ
                     EIDRYGRAKYFVNNLVGIFERGQLVGAWGTQR"
     gene            complement(961..>1617)
                     /locus_tag="VFD73_24070"
     CDS             complement(961..>1617)
                     /locus_tag="VFD73_24070"
                     /inference="COORDINATES: protein motif:HMM:NF022629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein"
                     /protein_id="HZI77055.1"
                     /translation="GPNTIFGRSRSFTMTRQKETESSISATVVGLFPNQADAERAIQR
                     LKQEGFSESQIGVAIKDRGDQKELIEGTGTQAAEGAATGAIGGGVLGGVIGLLASVGA
                     LAIPGVGPIIAGGTLASTLAGAGIGAAAGGLLGALVGMGVPEEDARHFDEGFRAGGTL
                     VTVDAGDRAEEARECLSDTGADLGSMGRRREEESWRGNERRYGHDSSYSGPERRLSRV
                     "
BASE COUNT          313 a          540 c          486 g          278 t
ORIGIN      
        1 tcacgctgcg taccccatgc acccaccagc tgcccccgct cgaagattcc caccaggttg
       61 ttgacgaagt acttggcgcg accgtaacga tcgatctcct gtgagttcgc gtcttccagg
      121 cggtagccgc ttcggatgaa gctccgcagg tactccacgt tggccggatt cgaaggtgac
      181 aggaatacca ccagctgggt ccccacgaca tcggccgcgg ttcggaaccc gtacatccgg
      241 gcgaaggcgt cgttgcactc ggccaacacc gagtagagat acagatgctc gatctgctca
      301 tcctccggga gggtgatgtc gagcggctgg gtatggtgaa aacgccaggt tgcttcggtc
      361 gtgacttctc taagcggcgg tgtcgccgac tcgacctcgg gcagctgtct tccggtacgc
      421 ccttcaaagg gggatggcga cactggccgc ggcacagctt cctcctggtc cattggctcg
      481 accgtgactc gcgatctcaa cacggcccgg cggaagatct cgcacaccac gccgagaatg
      541 gccccgattg cgaccattcc agcgtcgcgg gcgattagac cggagagcgc gagcgcaaac
      601 accccgggcc ccagcccacc gtagaggaaa cccaccacca cggcgaggag caacgcggaa
      661 gcggcatcgc tcccgacgcc ggcagagcgg agcgccagca tgatcccgac cgaaacaccg
      721 acggcgagcg cagtgaaacc gtatgccagc actcccgagg ggaacgggcg tgcgaagagc
      781 gatctgggag gcgtggatga cacgacgggt tcagtcctga tgcggcgtat ggattgaagg
      841 tatggccgcc cttctggggg cacaacagac acagatgctt cagcgagggg agcggtcgca
      901 caaagccgga gggagctgag ctaccctccg gctctgtcac cgccgatcaa cagtgaagtg
      961 tcaaactcgc gacagacggc gctccggacc ggagtagctg gagtcgtgac cataccggcg
     1021 ttcattcccg cgccaggatt cttcctcgcg gcgtcgaccc atggagccga gatcagcgcc
     1081 ggtgtcggac aggcactcac gcgcctcctc tgcgcgatct ccggcatcga cggtgaccaa
     1141 ggttccgcct gcccggaatc cctcgtcgaa atgccgggca tcttcttcgg gcacacccat
     1201 cccgacgagc gcgccgagca gtcctccggc ggccgctccg atgccagccc cggcgagggt
     1261 tgaggccagc gttcccccag cgataatcgg accgacccca ggaatggcga gcgctccgac
     1321 gcttgcgagc aggcctatga ctccgccgag cactccaccc ccaatggcac cggtagctgc
     1381 accttcggca gcctgggtcc cggtaccctc gatcaactcc ttttgatcac cccggtcctt
     1441 tatggcgaca ccgatctggc tttcggagaa tccctcctgc ttcaaacgct gaatggctcg
     1501 ctcagcgtcg gcctgattgg ggaaaagtcc taccaccgtt gcactgatcg aagactccgt
     1561 ctctttctgt cgggtcatgg tgaagctcct agatcttccg aaaatcgtat tgggccc
//
LOCUS       DASRPQ010002126         1045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4010397, whole genome shotgun sequence.
ACCESSION   DASRPQ010002126 DASRPQ010000000
VERSION     DASRPQ010002126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4010397"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..403
                     /locus_tag="VFD73_24075"
     CDS             <1..403
                     /locus_tag="VFD73_24075"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI77056.1"
                     /translation="RTDQDRVLLRFVEGRPVSRITTDFLAWGADRLGAEGKRVWVLVW
                     DNAAWHVSRAVRAWIGAHNRTVKRTGGVRILVCRLPVKSPWLNPIEPRWLHGKRAIVE
                     PERTLTAHELMDRVHQHFGCEPLQPLHQHVL"
     gene            complement(749..886)
                     /locus_tag="VFD73_24080"
                     /pseudo
     CDS             complement(749..886)
                     /locus_tag="VFD73_24080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611653.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
BASE COUNT          195 a          330 c          335 g          185 t
ORIGIN      
        1 gcgcaccgat caggatcgag tgctgctgcg ctttgtcgag ggccgcccgg tcagccgcat
       61 caccacggac tttctggcct ggggggccga ccggctcggc gcggagggca agcgcgtgtg
      121 ggtgctggtg tgggacaacg ccgcctggca cgtcagccga gcggtgcggg cgtggattgg
      181 ggcgcataac cgcacggtga agcgcaccgg cggggtccgg atcctggtgt gccggctgcc
      241 ggtgaagagc ccctggctca atccgatcga gccgcgctgg ttgcacggca agcgggcgat
      301 cgtcgagccg gagcggacgt taacggccca cgagctcatg gaccgagtgc atcagcactt
      361 cggatgcgaa cccctacaac cgcttcacca acatgtcctt tgagactgca ctaagaccgg
      421 gccaaagact tacttacaat tggatgggaa gtaccggcaa cagactgtgt ctcgtcccat
      481 gcgggtcgtg agcactgtcc gagtggcgat gggccggtca gcgcctccaa cacacaatgg
      541 ctataagcgc cgcgaacatc atggaggctg tgtgaaaacg gcgcttcgcc gcgagagcgt
      601 agcaagctct ttcgtgtgac ccgcgctcca gttgtgatca cctccaaccg cgagacggac
      661 gacataggcg tatgctcagt catacgccta tgtctcaaac cctcagcccc ctatcgcaag
      721 gcggccctcc ccggacgaat accgccgccc cgcgcttgcg ccacttgcgg atggtctcgg
      781 tcgagacgcc atagcgctgc gccaagacac cagttggctc gtgtgatcgc gcgatctcgg
      841 cgcggacggc cgggctggtg cgggctttcg ggtggatcgt gggcatcagg acctcctcgc
      901 ccgagcgggc ttggcaagcc gctcaaagcg ccaagcatag gcctctatcg cccaacgaac
      961 ctgatcccag caacgttccg ctaccaaaca tctaatacta cagccggggt tgatgagttt
     1021 tggttctgca ggtccagtgt gatcg
//
LOCUS       DASRPQ010002127         2186 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3719290, whole genome shotgun sequence.
ACCESSION   DASRPQ010002127 DASRPQ010000000
VERSION     DASRPQ010002127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2186
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3719290"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(241..723)
                     /locus_tag="VFD73_24085"
     CDS             complement(241..723)
                     /locus_tag="VFD73_24085"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZI77057.1"
                     /translation="MPSPRCAGSSAQVAALKDLATREIVGWSMAEHLKAGLCIDALVM
                     ALQRCRPPCGLIHHSDRGVQSAAGPYRAVLERHGIQPSMSRRGNCLDNAPMESFFASL
                     KTERVHEAQFRTRAEARAAVFEAIEVLYNRQRLHSALGYRTPVEARASMEAITIPKAA
                     "
     gene            complement(760..1056)
                     /locus_tag="VFD73_24090"
     CDS             complement(760..1056)
                     /locus_tag="VFD73_24090"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI77058.1"
                     /translation="MAHRRPRRRFTREYKVQAVQRLLESGRPLADIAAELDVCPGQLS
                     QWRNEQLAAGSAEALAARKAEQAETQRLRREVKRLEEEVEILRKAAAFFARGIA"
     gene            complement(1134..>2186)
                     /locus_tag="VFD73_24095"
     CDS             complement(1134..>2186)
                     /locus_tag="VFD73_24095"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI77059.1"
                     /translation="EQIGRDGHALLAAIMAPDGPAWLREVPAVMLLRQVWVQTFCLVL
                     SEASPGGGASAAGSDSLRVCWRTSAEGFPPALLRIASPYDPDMHCAQKRSTTWIGYKV
                     HVTETCDEGRPHLVTHVETTPAPIVDRDTLQQVHGSLAAKDLLPGSHLVDAGYVDSEH
                     LVASVRDHDVTLIGPAPKDQQWQARTPGAFTLQDFKLDWDRQVATCPAGHPSQSWTVN
                     PRQGRRVMRARFSRTHCQVCALKPRCTRSARRLLTVRPREEHAALEAARMRETQEAYT
                     AQYRARAGIEGTLSQAVRTMDLRRARYIGLAKVHLQHVLTAAALNLVRVAAWLAGAPL
                     ARTRHSAFVRLMAHPA"
BASE COUNT          356 a          729 c          716 g          385 t
ORIGIN      
        1 taatcatcgt caatgatcgt cacgaaccac ggctgccccg cgatccccgc tttctcaaca
       61 gcttgctcca acgccttggc ccagagctcc ccggcatacg gattgagggc gtgcaattcc
      121 tggcgatccc tgcggtcata aatgtgccgg tactcccgca tcgcacaccg cagccgagga
      181 ccgcggttcc ccctctcgtt ctgggcttcc cccttggtgt ggaagggata gatcagaata
      241 tcaggccgcc tttggtatgg tgattgcctc catgctggcc cgcgcctcaa ccggcgtgcg
      301 gtagcccaag gctgagtgca agcgctgccg attgtacaat acctcgatgg cctcgaacac
      361 cgccgcccgc gcctcggcgc gcgtgcggaa ctgagcctca tggacccgct ctgttttgag
      421 tgaagcaaag aagctctcca tgggcgcatt atcgagacaa ttgccccgcc ggctcatcga
      481 tggctggatg ccatgccgct ccagcaccgc ccgatacggc ccagcggcgg attgcacgcc
      541 gcggtcgcta tgatgaatga gcccgcaggg cgggcggcag cgctggaggg ccatgaccag
      601 ggcgtcgatg cagaggcccg ccttgagatg ctccgccatc gaccagccga cgatctcgcg
      661 cgtggccaga tccttgaggg cggccacttg cgccgacgac ccggcacagc gtggagacgg
      721 catggttggc gcgctcggtt gccacaaagg cgaacttggt cacgcgatcc cccgcgcgaa
      781 aaaagcggca gctttcctga ggatctcgac ttcctcttcg agccgcttga cctcacgccg
      841 gagccgctgg gtctcggcct gctcggcttt gcgagccgcc agcgcctcag ctgagccagc
      901 ggccagctgt tcattgcgcc actggctcag ctgccccggg cagacatcca gctcagccgc
      961 tatatcggcc agcggcctgc cactctcgag caagcgctga accgcttgga ccttatactc
     1021 acgcgtaaac cgtctccggg gtcgtctgtg tgccatctcg ccctcctggg gggctcgggt
     1081 tctttacaga accctccact ccgcagcaga tgctgctggc gaattcgacg ggttcaggct
     1141 gggtgtgcca tgagccggac gaaggctgag tggcgcgtgc gcgcgagcgg ggcgccggcc
     1201 agccaagccg cgacacggac aaggttgagg gcggctgcgg tgagcacgtg ttggaggtgc
     1261 accttcgcca gaccaatgta gcgggcgcgg cgcagatcca tggtgcgcac agcctgcgag
     1321 agtgtgccct cgatgccggc gcgtgcacgg tactgagcgg tgtacgcttc ttgggtctca
     1381 cgcatccggg ctgcctcgag tgcggcatgc tcctcgcgtg ggcgcaccgt gagcagacgt
     1441 cgggccgagc gggtgcagcg gggcttgagg gcgcacacct ggcaatgcgt acgggagaag
     1501 cgggcccgca tcaccctccg cccctgacgg gggttgaccg tccagctctg gctcggatgg
     1561 ccagccggac aggtcgcaac ctgccggtcc caatcgagct tgaagtcctg gagggtgaag
     1621 gcgcccggtg ttctggcttg ccattgctgg tccttaggcg ctggcccgat gagcgtcaca
     1681 tcgtggtcgc ggacgctggc caccaggtgt tccgaatcca catacccagc gtcgaccaga
     1741 tgcgagcccg gcagcagatc tttggcggcc agtgacccat gcacctgttg gagggtgtcg
     1801 cggtccacga tcggcgccgg tgtggtctca acgtgggtga cgagatgcgg ccgcccctcg
     1861 tcgcaggttt ccgtcacgtg caccttgtag ccgatccaag tggttgagcg cttctgggcg
     1921 caatgcatgt cggggtcgta gggcgaggca atccgcagca acgcgggcgg gaacccctcg
     1981 gccgatgtgc gccagcagac ccgcaggctg tccgatccgg ctgcactcgc tccaccccct
     2041 gggctggcct cggagagtac gaggcagaag gtctgcaccc acacttgccg caggagcatg
     2101 actgccggga cctcgcgcag ccaggcgggc ccatctggcg ccatgatggc ggccagcagt
     2161 gcatgcccgt cacgcccgat ctgctc
//
LOCUS       DASRPQ010002128         2175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_557433, whole genome shotgun sequence.
ACCESSION   DASRPQ010002128 DASRPQ010000000
VERSION     DASRPQ010002128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_557433"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..522
                     /locus_tag="VFD73_24100"
     CDS             <1..522
                     /locus_tag="VFD73_24100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77060.1"
                     /translation="HDADPDTEPGSPLRAEALIALVQALNTPTRAALSTLRGGGNRTG
                     AEAVLTSQTGYPFAVDHSRGYPRYLPTDKPQLSAGEYRAVLIVGSPPEFPVKAGKNSV
                     TMIVGPRASQSRLPARIAIDTGVAGIHEAGTAYRMDEVPLELTPPLPPIRSAREVVTA
                     LADAVRALRQQQR"
     gene            519..2147
                     /locus_tag="VFD73_24105"
     CDS             519..2147
                     /locus_tag="VFD73_24105"
                     /EC_number="1.2.7.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR03121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit A"
                     /protein_id="HZI77061.1"
                     /translation="MSPPVRLRIAGGTVHDPANGVDGEVRDICVDNGKIVAALPDGAP
                     TLDARGMIVMPGGVDIHSHFASSSCNHARRLLPEEHAADPVPAPLLDGWMSRSGTGGT
                     VPSTFTTGYRYAGLGYTTAFDAAVAPVMARHSHAELDDTPCLDGGFFVLMGNDEYLLR
                     QIDAGDRQRARDYAGWLLGATGAYAIKVVNPGGVEAWKAGQRNLSGIDEPLTGRQVTG
                     RAILETLAAAGNDLGLPHPIHIHCNNLGLPGNAEVTLASMQAVAGRRAHFTHLQFHSY
                     GGPAWSSAARPVMEYVNAHPEITVDVGQVMFGPATTITADGPVEYLLYKSSGRRWVNI
                     DIELETGCGIVPFAYKDKAAVSSLQWAVGLELFLLSSDPWRVVLSTDHPNGGSFLSYP
                     ALIQLLMDRAVRDERLKQVNPKLLAGSALTDGLDRQYTLNEIAIITRAGPARLLGLKD
                     KGHLGVGADADITIYNRDPDIAKMFATPRFVIKSGSIVVEEGQLRQAPRGRRLRLQPA
                     YDDAVLPDLRRYFETNSTVAFENYPVREIADDPI"
BASE COUNT          410 a          712 c          673 g          380 t
ORIGIN      
        1 cacgatgccg acccagacac cgaacccggc agccctctgc gagccgaggc ccttattgcc
       61 ttggtgcagg ctctgaacac gccgaccagg gccgcactga gcacccttcg cggtggcggc
      121 aatcggaccg gtgccgaagc ggtgcttacg tcccagaccg gctacccttt cgcagtggat
      181 cactcgcgtg gctatcctcg ctacctgccg accgacaagc cacaactgag cgcgggagag
      241 taccgggccg tcctgatcgt tggatctccc cccgaattcc cggttaaggc aggaaaaaac
      301 tcggtcacga tgatcgtcgg tccccgcgcc agtcaatcca ggctcccggc cagaatcgcc
      361 atagataccg gggtggccgg cattcacgag gcaggcactg cttaccggat ggatgaagtc
      421 cctctagagc tcactccacc gctcccgccc atccggtccg cgcgcgaagt cgtcaccgcc
      481 ctggcagacg cggtcagggc cctccggcag cagcagcgat gagcccgccg gtccgattgc
      541 ggatcgccgg cggcacagtg cacgacccgg cgaacggggt tgatggggag gtgcgcgata
      601 tctgtgtcga caacggcaag atcgtcgccg ctctgccgga cggcgcaccc acgctcgatg
      661 ccagaggcat gatcgtgatg ccgggcgggg tcgacatcca ttctcacttc gccagctcga
      721 gctgtaacca cgcacgccgc ctgttgccgg aggagcacgc ggccgatccg gtgcccgcgc
      781 cgcttctcga cggctggatg tcccgctccg gcacgggggg aacggtgccg agcacattca
      841 ccacggggta tcgctacgcc ggtctggggt ataccacagc gttcgatgct gccgttgccc
      901 cggtgatggc gcgacacagt catgccgagc tggacgacac tccctgcctg gacggcggct
      961 tcttcgtgct gatgggtaac gacgaatacc tcctccggca aatcgatgcc ggagaccgcc
     1021 agcgagcccg cgactacgcc ggctggctgc tcggggcaac cggcgcatac gccatcaagg
     1081 tggtcaatcc cggtggggtc gaagcttgga aggccggcca gcgaaatctg agcggcatag
     1141 atgagccgtt aaccggtcgg caggtgaccg gtcgagcgat cctggaaacg ttggcagcag
     1201 cggggaacga tctgggcctt ccccatccca ttcacattca ctgcaacaat ctgggtctgc
     1261 cgggcaacgc cgaggtgacg cttgcgagca tgcaggcggt agcagggcgc agggcccact
     1321 tcacccacct gcagttccac agctacggcg gtcccgcctg gagctcggcg gcacgtccgg
     1381 tgatggaata tgtcaacgct cacccggaga tcactgtcga tgtcggccag gtgatgttcg
     1441 gaccggccac cacgatcacc gccgacggac cggtggagta tctcctgtac aagagcagcg
     1501 gccggcggtg ggtcaatatc gatatcgagc tggaaaccgg ctgcggtatt gttcccttcg
     1561 cctacaagga caaagccgct gtttcctcgc tgcaatgggc ggttggactc gagctctttc
     1621 tgctcagcag cgacccctgg cgggtggtcc tgtccaccga tcatcccaac ggcggctcgt
     1681 ttctatcgta tcctgcgctg atccagttgc tgatggaccg ggccgtgcgg gatgaacgac
     1741 tgaagcaggt caacccaaaa ttgctggccg gctctgccct gacggacggc ctcgaccgcc
     1801 agtataccct caacgagatc gcgatcatca cccgcgctgg accggcccgg ctcctcggac
     1861 tcaaggacaa aggccacctg ggcgtcggag ccgatgcgga catcacgatc tacaatcgag
     1921 atcccgatat cgcgaagatg ttcgccactc cacgatttgt catcaaatcg ggatcgatcg
     1981 tcgtggagga agggcagctg cggcaagcgc ccagaggccg tcggctgcgg ttacaaccgg
     2041 cgtatgatga cgcggttctg cctgatcttc gccgctattt cgaaaccaac tctaccgtgg
     2101 cgttcgagaa ttatcccgtg cgggagattg ccgatgatcc catctgacgt tcggcaatca
     2161 tgaagatcca ggacg
//
LOCUS       DASRPQ010002129         1111 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4642215, whole genome shotgun sequence.
ACCESSION   DASRPQ010002129 DASRPQ010000000
VERSION     DASRPQ010002129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1111
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4642215"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..361)
                     /locus_tag="VFD73_24110"
     CDS             complement(<1..361)
                     /locus_tag="VFD73_24110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77062.1"
                     /translation="MARRLPSTANWLRWLTPGLQIKRWLLLLMASELVLVLGVAYALK
                     EIYQTARLPGIFYYITLQPLPYVVRAFIFLLVGVGVLVLSYVKLTQSVLGPFLPGNSS
                     ASVVEVIHAFRLRGRGPR"
     gene            429..806
                     /locus_tag="VFD73_24115"
     CDS             429..806
                     /locus_tag="VFD73_24115"
                     /inference="COORDINATES: protein motif:HMM:NF039544.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5808 domain-containing protein"
                     /protein_id="HZI77063.1"
                     /translation="MRNLRNLRRLVRFLTFGLVVAAVATELSKPAEERTWQGRVGGVV
                     PYDFRPPTWQRIRDAYWNPESDRLFSDRVFGVGWAVNLYRAKTLLEETFQRLMGGGPE
                     TVSIRMAVKAERGGKPDVVITRE"
     gene            860..934
                     /locus_tag="VFD73_24120"
     tRNA            860..934
                     /locus_tag="VFD73_24120"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:892..894,aa:Gln,seq:ctg)
BASE COUNT          223 a          330 c          369 g          189 t
ORIGIN      
        1 cccgcggacc gcggccgcgc agacgaaatg cgtggatcac ctcgaccacg ctggcggagc
       61 tgttgcccgg caggaaggga ccgaggacgg actgcgtgag tttcacgtag ctcaggacga
      121 gcactccgac gccgaccagc agaaagatga acgcacgcac gacataaggg aggggctgca
      181 gcgtgatgta gtagaagatc ccgggcagcc gggcggtctg atagatctcc ttcaaggcgt
      241 acgccacgcc gaggacgagt accagctcgg aggccatcaa cagcagcagc cagcgcttga
      301 tctgaagccc gggcgtgagc cagcgcagcc aatttgcagt cgaaggaagc cttctggcca
      361 tctaccccgc ctggatcaac gcttgaaaaa cgtgcaaggt tactctggta ctacgcttca
      421 actgaagtat gcggaacttg cgcaacctcc gtcgcctcgt taggttcctg acttttggcc
      481 tggtcgttgc ggctgttgcg acagagctgt cgaaaccggc cgaggagagg acctggcagg
      541 gcagggtcgg aggggtcgtg ccgtacgact tccggccgcc gacctggcag cggattcggg
      601 acgcgtactg gaaccccgag tccgaccgcc tgttcagcga tcgtgtcttc ggcgtgggct
      661 gggcggtcaa cctctacagg gcgaaaacgc tcctggagga gaccttccag aggctcatgg
      721 ggggaggtcc agagacggta tccatccgga tggccgtcaa ggcagagcgc ggcggcaagc
      781 cggacgtggt catcacccgc gagtagctcg gcgccggccg ctacttagaa tggttcgccc
      841 cggccaggcg tggccacgtt ggggagtggc gcaacggtag cgcagctgac tctggatcag
      901 aaggttgaag gttcgaatcc ttcctcccca gccactactg cggatcccct cggtccagcc
      961 atctacctct cgccgcaatg agaggatgct cgagagatga acgaactggg ccatgtgtcc
     1021 acggagggcg ggccgctgct gctcatcgac cgcgacgctg taggcaactg gttcggcatc
     1081 gacagtgacg attacgatcg ggcttgtcag t
//
LOCUS       DASRPQ010002130         4549 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3064634, whole genome shotgun sequence.
ACCESSION   DASRPQ010002130 DASRPQ010000000
VERSION     DASRPQ010002130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4549
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3064634"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..287
                     /locus_tag="VFD73_24125"
     CDS             <1..287
                     /locus_tag="VFD73_24125"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HZI77064.1"
                     /translation="SSQSFGKSYAAFTVEAGARISQSLYVSSFFDAGNVYRSARQWDP
                     TRLFRGAGFGAAVISPLGPIGVDLGYGFDRVSLSGKVGGWQLHFKLGNFF"
     gene            317..853
                     /locus_tag="VFD73_24130"
     CDS             317..853
                     /locus_tag="VFD73_24130"
                     /inference="COORDINATES: protein motif:HMM:NF015871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HZI77065.1"
                     /translation="MKLVVRGVWVGLAAVLTVGTGSLTAQQGAPKIAFVNTQAILKQT
                     PGYVKAESTFTKELANYRVEVQKLQASLDSAASDFDQQSVMLSPTQRAAKRKDLQAQQ
                     QKLEQRTQELQQQAATRERELLDPIQSKVNSVIEGVRAAGNYAMIFDVSAPNNGIVTA
                     DKSLDLTQRVIQQLKAGS"
     gene            858..1889
                     /gene="lpxD"
                     /locus_tag="VFD73_24135"
     CDS             858..1889
                     /gene="lpxD"
                     /locus_tag="VFD73_24135"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: protein motif:HMM:NF002060.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HZI77066.1"
                     /translation="MTPQSLTAQAVADLVGGRLFGDGSVCLRGIRPLDRAEPDSLSFA
                     TSSRYAADLGSSRAGAVLVPEDLAKGSGPSTRIVVSDPYGALVRVIRELYPENAPTPG
                     VDPTARVGAHSVLGPQVSIGPFSVMGEGVRLGARVALADHVSLGDGVIVGDDSVLGPG
                     VVCYSGARLGRRVVIKAGAVIGGPGFGYLSGPGGHSRIPHIGSCILEDEVEVGSNTCI
                     DRGSIDDTVVGRGTKLDNLVQVGHNVRIGERCLIMAGVGIAGSTHIGNEAILAGHVGV
                     TDHLVIGDRARIAAKSAIFGDVPPGASFSGHPARPHRQFLRAQAAMYRLAPIVDELEA
                     LVPERGRRA"
     gene            1846..3153
                     /gene="lpxC"
                     /locus_tag="VFD73_24140"
     CDS             1846..3153
                     /gene="lpxC"
                     /locus_tag="VFD73_24140"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: protein motif:HMM:TIGR00325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HZI77067.1"
                     /translation="MSWKLWCRSGAAVPRRTLAKPACVAGIGLHTGMHVSAVCQAAPP
                     GQGIVFRRTDLPGAPPIPARLGEVQSTERRTALGHGETVVQTVEHLLAAAAALQLDDL
                     TIELDGPEPPIGDGSFAPYLNALEEAGVAEQSGDPVVYRVLAPFDLREGDSSYLVSPA
                     KSLRLTTTIEWPHPLIGRQTGSYNINPADFAQEISQARTFGFLREAEALRARGLALGA
                     ALESTLVLSDDGLVGGSLRWPDEFVRHKAGDILGDLALTGGRIQAHIVATKPSHQGNI
                     ALARWLTRTGRREGGVVMDIGRILDVIPHRYPFLLVDRIIEVEGTKRIVGIKNVTINE
                     PFFQGHFPGHPIMPGVLIIEAMAQVGGMLLLGTIEDPDQKVVYFMSLDNVKFRRPVLP
                     GDQLRCELEMLQNRGRTCRMKGMAYVEGQVVAEAEMMARVVDR"
     gene            3150..3929
                     /gene="lpxA"
                     /locus_tag="VFD73_24145"
     CDS             3150..3929
                     /gene="lpxA"
                     /locus_tag="VFD73_24145"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HZI77068.1"
                     /translation="MRRPTIHPSALIDPSAELGGDVTVGPFAIVGPNVLVAAGCRIGP
                     RVTLQRNVRLAEDVVIGDGSILGGDPQDLKYRGEETWVEIGAGTIIREYSTINRATSA
                     TLKTTVGARCFIMSYVHLAHDCHVGDDVVIANATQCAGHVTIQDHAVLSGLNAVHQFV
                     TIGSYAFVGGGSRVNQDIPPYVKAVGNPMELYGLNTIGLQRAGFSPDTVAALKRAYRL
                     FFNSDLNLSQALERARTELPGFPEIDRFLAFVESSERGVPA"
     gene            3929..>4549
                     /locus_tag="VFD73_24150"
     CDS             3929..>4549
                     /locus_tag="VFD73_24150"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HZI77069.1"
                     /translation="MPRLPVGVIGVGALGQHHARHLAGLREVRLVGIHDIDPIRAQQV
                     AAELGTLVFPEMEALLARVEAVTVAVPTPVHAEVGLQALGFGVPVLMEKPLAATLEEA
                     DRLIAAADRRSLQLQVGHIERYNRALRAAEPYLDGPRYLESQRLAPFQPRGTDVAVVL
                     DLMIHDLDLVLHLTGGSTATEVRASGISVLSPHLDLANARVEFANGA"
BASE COUNT          795 a         1410 c         1491 g          853 t
ORIGIN      
        1 ccagctcgca gtcgttcggc aagtcgtatg cggcgttcac ggtggaagct ggagcccgaa
       61 tcagccagtc gctctacgtc agcagcttct tcgatgccgg aaacgtctac cgcagtgccc
      121 gccagtggga tccgacgcga ctcttcaggg gagcggggtt cggggctgcg gtgatttccc
      181 cgctcgggcc gattggtgtc gacctgggtt atggattcga tcgggtcagt ctcagcggga
      241 aggtaggcgg gtggcagctc cactttaagc tcgggaattt cttctaggcc gtacgacctt
      301 tcatcgggag tgaagcatga agcttgtcgt caggggagtc tgggtgggat tggccgctgt
      361 actgacggtg ggaaccgggt ctctcaccgc gcagcagggt gcccctaaga ttgcctttgt
      421 gaatacccag gcgatcctca aacagacacc cgggtacgtc aaggcggaat cgacctttac
      481 caaggagctc gccaactatc gggtcgaggt ccagaagctg caggccagcc tggattcggc
      541 tgcatcggac ttcgaccagc aatcggtcat gctgagcccc acccagcgcg ccgcaaagcg
      601 gaaggatttg caagcccagc agcagaagct ggagcagcga acccaggagc tgcagcagca
      661 ggcggctacc cgtgaacgtg agctgctgga tccgatccaa agcaaggtca acagcgtcat
      721 cgaaggggtc cgcgccgcag ggaactacgc catgatcttc gatgtgagcg cccccaacaa
      781 cggcatcgtt acggcagata aatcgttgga tctcactcaa cgcgtcattc agcagctcaa
      841 agcgggcagc tagtcgcgtg acgccgcaga gtctcaccgc gcaggcggtc gccgatctcg
      901 tcggtggccg cctgtttggc gatgggagcg tctgtctgcg gggcattcgc ccgctcgacc
      961 gcgccgagcc cgacagcctt tcatttgcca cctccagccg gtatgccgcc gatctaggca
     1021 gctcgcgggc gggtgccgtt ctggttccag aagacctggc caaggggtcg ggtccgagca
     1081 cccggatcgt ggtgtccgat ccgtatggtg cactcgttcg ggtcattcgc gagctgtacc
     1141 ctgaaaacgc gccaactccc ggagtcgatc ccactgcgcg ggtcggcgcc cactccgtgc
     1201 tgggaccgca ggtatcgatc ggtccattct cggtcatggg cgaaggtgtc cggctcggcg
     1261 cacgggtggc tttggctgat cacgtgtcct taggagacgg tgtcatcgtc ggagacgact
     1321 ccgtgctggg gcccggggtc gtgtgctatt cgggagctcg attggggcga cgggtagtca
     1381 tcaaagctgg cgccgtcatc ggcggccccg gattcgggta tctgtccggc ccgggcggac
     1441 actcccgtat ccctcacatc ggaagctgca ttctcgagga cgaggttgaa gtcggctcca
     1501 atacctgcat cgatcgggga agtatcgacg ataccgtcgt cggccgcgga accaaactgg
     1561 acaacctggt ccaggtcggc cataacgttc gcattggcga gcgttgcctg atcatggccg
     1621 gcgttggcat cgccgggagc acgcacatcg gaaacgaagc cattctggcg ggacacgtcg
     1681 gggtgaccga tcacctggtg atcggtgacc gcgccagaat cgcggccaag agcgcgatct
     1741 tcggggacgt ccctcccggc gcgtcattca gcgggcaccc cgcgcggcct caccggcagt
     1801 tcctccgcgc gcaggctgcc atgtatcgtc tggcaccgat cgtcgatgag ctggaagctc
     1861 tggtgccgga gcggggccgc cgtgcctagg agaacgctag cgaagccggc ttgcgttgcc
     1921 ggcatcggcc tgcataccgg catgcacgtg tccgcggtgt gccaagcggc gcccccaggg
     1981 cagggaatcg tgtttcggag gacagatctc ccgggcgctc cgccgatccc cgcgcgatta
     2041 ggcgaggtgc aatcgacgga gcggcgaaca gcactgggtc acggcgagac ggtggtgcag
     2101 accgttgagc acttgttggc cgcggccgcg gcgctccaac tcgacgacct cacgatcgag
     2161 ctggacgggc ccgagccccc gattggagac ggttctttcg caccgtacct caacgctctc
     2221 gaggaagcgg gcgtcgcaga gcagtcgggc gacccggtgg tctaccgggt tctggcaccg
     2281 ttcgatctcc gggagggcga ctcctcctac ctggtgagtc ccgccaagtc gctgcggctc
     2341 accaccacga tcgaatggcc gcatccgctg attggtcgcc agaccggctc ctataacatc
     2401 aatcccgctg atttcgccca ggagatctca caggcccgca cctttggatt cctgcgtgaa
     2461 gcggaagcgc tgcgcgctcg cggcctggcc ctcggcgcgg cgctcgaatc tacgctcgtg
     2521 ctctccgatg acgggctggt aggcggttcc ctcaggtggc ccgacgagtt tgttcggcat
     2581 aaggcagggg acatcctggg cgatctcgca ctcaccgggg gccggatcca ggcgcacata
     2641 gttgccacca agcccagtca ccagggtaat attgcgctgg cccgctggct cacccgcacc
     2701 ggacggcgag agggaggcgt tgtgatggac attggccgga tactggatgt cattccccac
     2761 cggtatccct tcctactggt cgaccgcatc atcgaggtcg agggaaccaa gcggatcgtc
     2821 gggatcaaga acgtgacgat caacgagccg ttcttccagg gtcactttcc gggtcatccc
     2881 atcatgcccg gcgtcctcat tatcgaagcg atggcgcagg tcggtggaat gctgctgctc
     2941 ggcaccatcg aggatcccga tcaaaaagtc gtgtacttca tgtcgctcga caacgtgaaa
     3001 tttcgccgcc cggtgttgcc gggagaccaa ctgcggtgtg agctcgaaat gctgcagaac
     3061 cgcgggcgaa cctgccgaat gaaggggatg gcgtatgtgg aaggtcaggt ggtcgcggaa
     3121 gccgagatga tggcccgagt ggtcgaccgg tgaggcggcc gacgatccat ccgagtgccc
     3181 tgatcgaccc cagcgctgaa ctgggcggcg acgtcacggt cggtccgttt gcgatcgtgg
     3241 gcccgaatgt gctcgtcgcc gccggctgcc gcatcggacc gcgggtgacg ctgcagcgga
     3301 acgtgcggct ggccgaggat gtggtcatcg gcgacgggtc gattctcggc ggtgatcccc
     3361 aggacctcaa gtaccgggga gaagaaacct gggtcgagat cggggcagga acgatcatcc
     3421 gggaatactc caccatcaat cgcgccacct cggcaaccct gaagaccacg gtgggcgccc
     3481 ggtgcttcat catgagctac gtgcacctgg cccatgactg tcacgtgggt gacgatgtcg
     3541 tgattgcgaa cgccacccag tgcgccggtc atgtcaccat tcaggatcat gcggtgctga
     3601 gcgggctcaa tgcggtacat cagttcgtca ccatcggcag ctacgcgttt gttggaggag
     3661 ggtcccgggt caatcaggat atccctcctt acgtgaaggc cgttgggaat ccgatggagc
     3721 tatatgggct caacaccatc ggactgcagc gcgccggatt ctcgccggat accgttgccg
     3781 cactcaagcg cgcgtaccgg ctgttcttca attccgatct caacctttcg caggcgctgg
     3841 aacgcgcccg gaccgagctt ccgggttttc ctgagatcga ccggttcctg gcttttgtgg
     3901 aatccagcga gcggggagtt cccgcctgat gccccgcttg ccggttggcg tcatcggcgt
     3961 cggcgccttg ggccagcatc atgcccgtca cctggccggg ttgcgggagg tgcggctcgt
     4021 gggcatccat gacatcgacc cgatacgcgc gcagcaagtt gcggccgagc tgggaacgtt
     4081 ggtgtttccc gaaatggagg ctcttctcgc acgggtagag gcggtcacgg tcgcggtgcc
     4141 tactccggtc cacgccgaag tcggtctgca ggccctcggg ttcggtgttc cggtgctgat
     4201 ggagaagcca ctcgctgcca ctctggagga agccgaccgt ctcatcgccg cggccgaccg
     4261 gcgaagctta cagctgcagg tcggtcatat cgagcgctac aatcgcgcgc tacgagctgc
     4321 cgagccgtat ctcgacggtc cccggtattt ggagagtcag cgcctggctc cgttccagcc
     4381 gcgcggcacc gacgtggccg tggtgctcga tctcatgatc cacgacctgg atctggtgct
     4441 gcaccttacc ggcggaagca ccgccaccga agtgcgagcc tcgggcatat cggtgctgtc
     4501 acctcatctg gacctcgcca atgcacgcgt ggagtttgcc aatggtgcc
//
LOCUS       DASRPQ010002131         2465 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3065195, whole genome shotgun sequence.
ACCESSION   DASRPQ010002131 DASRPQ010000000
VERSION     DASRPQ010002131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2465
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3065195"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..762
                     /locus_tag="VFD73_24155"
     CDS             <1..762
                     /locus_tag="VFD73_24155"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI77070.1"
                     /translation="NIRLDGVALDEAGRDAKRRIGFLPENNPLYVEMLVSEYLEFVGR
                     LRDLQGQERDRSIDEAVSATGIESVFNRPIGELSKGFRQRVGLAAAILHRPDLLVLDE
                     PTEGLDPNQRVEIRRLISELGRERTVLLSTHVLPEVQFTCSRLLIINRGKIVADGAVE
                     SLVGQATAGVRISVEASGNALEDRLASLEGVHGVERREAHNGRVKLSVTAGGEDVRPR
                     IFELAKNQGWTLYELHQEAGSLEDLFRQLTAGETA"
     gene            759..>2465
                     /locus_tag="VFD73_24160"
     CDS             759..>2465
                     /locus_tag="VFD73_24160"
                     /inference="COORDINATES: protein motif:HMM:NF021351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gldg family protein"
                     /protein_id="HZI77071.1"
                     /translation="MRRVWAVALREFKALFDHPTAYVLLVVFLGVNAFLFFRQAYVAG
                     AASLRPMLDLLPWLLLFFVPAVTMRTLAEDSRSGVLEVVLSQPVTELELLAGKYLGSV
                     LFLWTALALTLPIPIALSFAAHLQWGPIIAQYVGSALLAASLAGVGVWASTVASTQMT
                     AFIIAVVVMFVLVLFGLDPLIVGLPPSLGAVAARLGVLSHFDSISRGVIDLRDVIYFI
                     SLAAIFLAFAFGTLVRRKLAPAGGALRRLRLGVGLLVAILIVINLLGSYIRGRLDLTP
                     GRAYTLSPETEQIVKGLDDIVTIKLYASKELPTEAALLKRDVDDLLHDLKSAGQGKVR
                     IIQRDPAENDAARRDAQAMGIEPVQFNVIGQSELQVKEGYLGIAIQHADGNETIPFVS
                     ETDDLEYRLASAIRSLTRTKKPVVGLVNEAKQPEAGLQEFRSQLAKGYEVRDVSLGDS
                     SQVAKDISVLVLAGNPDSLPVTQLGRLNRFFDGGGSALVFASGMELSPQLPMAMPKPV
                     AWNSALQRFGTSIRSDMVYDLQASEIVPVPSPAGQVLRQYPFFVRGASTGKSVINKEV
                     NGA"
BASE COUNT          452 a          724 c          795 g          494 t
ORIGIN      
        1 aacatacggc tggatggcgt ggccctggat gaggctgggc gagatgccaa gcgccggatt
       61 ggatttctcc ccgaaaacaa tccgctgtat gtcgagatgc tcgtctcgga gtatctcgaa
      121 ttcgtcggcc ggctgagaga tctccagggt caggagcggg accgttcaat cgacgaggcg
      181 gtctcggcga ccggcatcga atcggtgttc aaccggccga ttggggagtt gtcaaagggc
      241 tttcgccagc gggtgggact ggccgccgcc atccttcatc ggccggacct gctggtgctg
      301 gatgagccga ccgagggtct ggacccgaac cagcgggtgg agatccgccg gttgatcagc
      361 gagttgggcc gggagcgaac cgtgctcctg tcgacccacg ttctgcctga ggtccagttt
      421 acctgttcgc gcctgttgat catcaaccgc ggaaagatcg tagccgatgg tgcggtagag
      481 agcctggtcg gtcaggcgac ggcgggggtt cgcatcagcg tagaagccag tggcaatgcc
      541 ctcgaggacc gattggcctc cttggaaggg gtacacggag tcgagcgcag ggaagcccac
      601 aacggcaggg tcaagctgag tgttacagcg ggcggtgagg atgtccggcc ccggatcttc
      661 gagctggcca agaaccaggg ctggacgctc tacgagttac atcaggaggc cggcagcctc
      721 gaagatctct tccgccagct caccgccggg gagaccgcat gagacgagtc tgggcggtgg
      781 cgctccgcga gttcaaggcg ctcttcgatc atccaacggc gtacgtcctc ctggtcgttt
      841 tcctgggagt gaatgcattc ctcttcttcc gccaggcgta tgtggccgga gcggccagcc
      901 tgaggccgat gctggatctc ctgccgtggc tcctgctgtt cttcgtaccc gccgtgacca
      961 tgcgcaccct tgccgaggac agccggagcg gcgttctcga agtggtcttg tcacagccgg
     1021 taaccgagct ggagctgctg gccgggaagt acctggggag cgttctcttc ctgtggaccg
     1081 ctctggcgct cacattgccc attcccatcg cactcagctt cgcggcccat ctgcagtggg
     1141 gtccgattat cgcccagtac gtcggatcgg cacttctggc cgccagcctc gcaggtgtcg
     1201 gagtctgggc ctcaacggtc gcctcgactc agatgacggc attcatcatc gccgtcgtgg
     1261 tgatgttcgt gctggtgttg ttcggcctcg acccactgat tgtggggctc ccacccagcc
     1321 tcggtgccgt tgcggcccgg ctaggcgtgc tgtcgcactt cgacagcatc agtcggggtg
     1381 tcatcgacct ccgcgatgtc atctacttca tttccctggc ggccatcttt ctggcgtttg
     1441 ccttcggcac cctggtccgg cgcaagcttg ctccggcagg gggagcattg cggaggctga
     1501 gattgggagt ggggctcctg gtagcaatac tgatcgtgat caacctgttg ggaagctaca
     1561 tccgagggcg gcttgacctc acgccgggac gcgcctacac cctgtcgccg gaaaccgaac
     1621 aaatcgtcaa aggcctggac gatatcgtca ccataaaact gtatgcatcg aaggagctcc
     1681 cgaccgaggc cgcgctgctc aagcgggatg tcgacgatct tctgcacgac ctgaaatcgg
     1741 cggggcaggg taaggtccga atcatccagc gggatccggc agagaatgat gccgcgcggc
     1801 gcgacgcaca ggctatgggc attgagccgg tccagttcaa cgtcatcggc cagtccgagc
     1861 tccaggtcaa ggaagggtat ctcggaatag caatccagca tgctgacggc aacgagacca
     1921 ttccttttgt ctccgaaacc gatgatctcg agtaccgatt agcctcggcc attcggtcgt
     1981 tgactcgaac caagaagccg gtggtgggtc tggtcaatga ggcgaagcag cctgaagccg
     2041 gactccagga attccggagc cagttggcca aaggctacga ggtacgcgac gtgtcgctgg
     2101 gagacagctc tcaggtggcc aaggatatct ccgtgctggt tctcgcagga aatcccgatt
     2161 cgctcccggt aactcaattg ggccggctga atcgattctt cgatggcggc ggaagtgcgc
     2221 tcgttttcgc cagcggcatg gagctctcgc cgcagcttcc gatggccatg ccaaagccag
     2281 tggcctggaa ttccgcgctc cagcgcttcg gaacctccat tcggagtgac atggtgtacg
     2341 acctgcaagc cagcgaaatc gttccggtgc catcgccggc gggacaagtg ctgcggcagt
     2401 atccattctt cgtacggggg gcgagcaccg gcaaatcggt gatcaacaaa gaagtgaatg
     2461 gtgca
//
LOCUS       DASRPQ010002132         1505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3419955, whole genome shotgun sequence.
ACCESSION   DASRPQ010002132 DASRPQ010000000
VERSION     DASRPQ010002132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3419955"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..934
                     /locus_tag="VFD73_24165"
     CDS             <1..934
                     /locus_tag="VFD73_24165"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI77072.1"
                     /translation="KTRSSELWAATVAGIRNGRKISRGEGMVVQGAGRIFPIGLSTTT
                     FRQEAQDAPSVTAIFTDISDLKEVQELHMRAERLEAVAELSASLAHEIRNPLASIRSS
                     VEQLARAKHADEDERFLSSLIVRESDRLSRLLSEFLDFARVRATHFAPLDLHSVIVAV
                     VRLIRAHPDCRPDAVITIEGEHTLLDGDEDLLHRVVANLVLNAVQAARGPIKVTISVK
                     SAQPGEIPHGTDLEHAVRLQVRDNGPGIPEEVRERLFQPFVSGRSGGSGLGLAIVQRA
                     VEAHRGLVLVDSGPGSGTTFTIFLPAKMVAEDAA"
     gene            931..>1505
                     /locus_tag="VFD73_24170"
     CDS             931..>1505
                     /locus_tag="VFD73_24170"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI77073.1"
                     /translation="MSYKPSVLVVDDESGILDTLRILLRNEGFEVTTAQGGKAGLEQI
                     RSGAHDIILSDVRMPQVSGLDILSAAREQDPMTPVILMTAQASLQSAISAVNSGAFYY
                     IQKPFSNDELVAILRRACEYRAVKVENTQLKQEIRRRDKTTIARPIGKSKRFLDVLKL
                     AEHVAPTDSTVLIQGESGTGKEVIARYIHNLS"
BASE COUNT          294 a          482 c          467 g          262 t
ORIGIN      
        1 caagacccgg tcatccgagc tctgggcggc cacggtagcg ggaatcagga atggaaggaa
       61 gatcagccgg ggcgagggta tggtggtcca gggcgccggc cggattttcc cgatcggtct
      121 cagcaccacg acctttcgcc aggaagccca ggacgcgccc tcggtaacag ccatctttac
      181 cgacatttcg gatctcaagg aagtccagga gctccacatg agagctgaac gcctggaagc
      241 cgtggccgag ctgagcgcgt cactggctca cgagatccgc aacccgctgg cctcgatccg
      301 gagctcggtc gagcagctgg cgcgagccaa gcatgccgat gaagacgaac gcttcctctc
      361 cagtctgatc gtgcgggaga gcgaccgact cagccggctc ttgagtgagt ttctggattt
      421 tgcccgggtc agagccaccc actttgctcc cctggacctt cattcggtaa tcgtcgccgt
      481 cgtgcgcctg atccgggctc accccgactg ccggcccgac gcggtgatta ccattgaagg
      541 cgagcacact ctgctcgacg gcgacgagga cctattgcac cgggtggtgg ccaacctggt
      601 gctcaatgcc gttcaagcgg ctcgcggacc gatcaaggtc accatttcgg tcaagtcggc
      661 ccaaccggga gagattcccc acggcaccga cctggagcac gccgtcaggc tccaggttcg
      721 ggacaacggt cccggcattc ccgaagaggt acgggagcgg ctgttccagc cgttcgtctc
      781 cggccgctcc ggcggcagcg ggctgggact ggcaatcgtc cagcgcgcag tagaagcgca
      841 ccgcgggctc gtgctggtcg actccggacc ggggtccgga accacattca cgattttctt
      901 gccggctaaa atggtcgcgg aggacgctgc atgagctata agccgtcggt gctggtcgtc
      961 gacgacgagt ccgggatcct ggatacactc cgtatcctgc tgcggaacga agggttcgaa
     1021 gtcaccaccg cccagggtgg caaggcaggg ttggagcaaa tccgttcggg ggcccacgac
     1081 atcatcctct ccgatgtgcg aatgccgcag gtgtcgggac tggatattct gagcgccgct
     1141 cgcgaacagg accccatgac cccggtcatc ctgatgaccg cgcaggcatc actgcaaagt
     1201 gccatcagtg cggtcaactc cggcgcgttc tactatatcc agaagccgtt ctccaacgac
     1261 gagctggttg ccatcctgcg gcgggcctgt gagtaccgcg cggtcaaagt cgagaacacc
     1321 cagctcaagc aggagatccg ccggcgggac aagaccacca ttgcgcggcc aatcgggaag
     1381 tccaagcgct ttctcgatgt gctcaaactc gccgagcacg tggctcccac cgactccacc
     1441 gtcctgatcc agggggaaag cggcaccggc aaggaggtca tcgcccggta catccataat
     1501 ttgtc
//
LOCUS       DASRPQ010002133         1295 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3065318, whole genome shotgun sequence.
ACCESSION   DASRPQ010002133 DASRPQ010000000
VERSION     DASRPQ010002133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3065318"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..282)
                     /locus_tag="VFD73_24175"
     CDS             complement(<1..282)
                     /locus_tag="VFD73_24175"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77074.1"
                     /translation="MMAFLTEEQVRAVLRMEDLIPAMERALTEFSAGRVTQPPRQMLA
                     IEPYAAHFGSMPVAGSVGVGAKLVTLYPGNAARGLPTHAAVIVLFHPETG"
     gene            570..1295
                     /locus_tag="VFD73_24180"
                     /pseudo
     CDS             570..1295
                     /locus_tag="VFD73_24180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611416.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
BASE COUNT          223 a          434 c          410 g          228 t
ORIGIN      
        1 gccggtctcg gggtggaaca acacgatcac ggctgcatgg gtgggcaagc cacgggcagc
       61 gttcccgggg tagagcgtga cgagcttggc gcctacacca acgctgcctg ccaccggcat
      121 cgaaccgaag tgagcggcat aaggctcgat ggcgagcatc tggcgagggg gttgcgtcac
      181 ccgcccagcc gagaactcgg tgagcgctct ttccatggct gggatcagat cctccatccg
      241 aagcacggct cggacctgct cttcggtcag aaaagccatc atcgcggacc tcctcaccgg
      301 cttccgaagg agctacgggc accctctcac gttaaccgtc gccacacagt ggcggctcac
      361 atttgccgtc ccagtcgcag ccagccgcgc tggcgtgctt ctacgcgcgc agatggccgt
      421 cctgttctga acattcagtc tctccgcagt caggtggaac accttcgttc attgagttat
      481 accaagtcgc agtctggttg actcatgggc tgcttttctg gcgggcctag gtatgattca
      541 cggtggcgat cactcgtctg gaggtcgcca tggccgctgc cgtcccgctc cgttctgact
      601 ttgatgccgc ccaactccgc gcgctcgcca agcgctcacg ggatcccgat cagacccgcc
      661 gccttctggc tctggcggcg atctatgatg gggcctcccg gaccgaggcg gctcagatcg
      721 gctgcgtgac gctgcagatc gtgcgcgatt gggtgctacg cttcaacgcg cgaggacctg
      781 agggccttct gaccggccga gcgccaggag ccccgccgcg gctcaacgat cagcaccgac
      841 aggccctaca ggccatcgtt gaccagggcc ccatcccggc catccacggc gtggtgcgct
      901 ggcggttgat cgatctgatc cagtggctct gggaggagtt ccgcctctcc atctccaaac
      961 agaccttgag ccgggagctg cgcgccttgg actatcgcaa gctctcggcc cgcccgcgcc
     1021 atcacgccaa gagcgaggcg gcggtggccg cttttaaaaa gacttcccgg cccgcttgga
     1081 ggagatccgg caggcggtgg gcggcaagcc gatagaaatc tggttcgcgg acgaggcccg
     1141 cgttgggcag aagaacaaga tcacgcgccg ctgggccaaa cgcggcaccc gcccgtcagc
     1201 cccgaaggac cagcgaacgg cgtcagctta catcttcggg gcgatctgcc cggctgaggg
     1261 caaaggcgcg ggcttggtgc tgccccgctg cacca
//
LOCUS       DASRPQ010002134         1901 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3065340, whole genome shotgun sequence.
ACCESSION   DASRPQ010002134 DASRPQ010000000
VERSION     DASRPQ010002134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1901
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3065340"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..>1901
                     /locus_tag="VFD73_24185"
     CDS             27..>1901
                     /locus_tag="VFD73_24185"
                     /inference="COORDINATES: protein motif:HMM:NF012873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="condensation domain-containing protein"
                     /protein_id="HZI77075.1"
                     /translation="MQLLNGHTLYVVPEEVRQDPSALIKFCKQNSLDVLDCTPTVLGL
                     LLAEGLLEEAVPAVVFVGGEPIDQHTWELLAASQRISFYNVYGPTECTVNATISPVSK
                     EQKRASIGGSLTNVQVYILDRDLSPVPIGVRGEIYIGGAGVGRGYTGRPDLTAERFVP
                     DPYSDAPGSRLYKTGDQARYFADGKIDFIGRLDQQVKVRGYRIEPGEIEAALEQHPAV
                     ANAAVVMGQRSASDAQLLAYLVASSPIDDALLRSFLADSLPQYMIPAVFITLESLPLT
                     ASGKLDRLALPDPPTVTSRPERLSYSLDRPTQTAIAEVWTEVLGLDHVGLDDNFFNLG
                     GHSLLATQAASRLRQYFNIELPLRKLFEAPTVRELAAVIDSELSPRQKGTEIRARERH
                     EPVALSYAQQRLWFLDQLEPGSDSYNIAAALRLEGSLNEEALGRALQEVVRRHEVLRT
                     RIEVIGTAPYQVIDESVVLSLPLIDLSELEEQSRGAAAEGVKREEASAGFNLSTGPVL
                     RAKLIKQGAQDHLLLVTMHHIVSDGWSIGVLVKEFSALYEAYRRGEESPLPELPVQYA
                     DYALWQREWLQGEVLDEQLRYWEEKLAGAPAMIELPADRARGAFRAGGGTAGRVRVEF
                     D"
BASE COUNT          378 a          517 c          657 g          349 t
ORIGIN      
        1 cattcgacac ttccgtcaaa caatttatcc aactcttgaa cggccacacg ctctacgtcg
       61 tgcctgagga ggtgcgacag gatccgagcg ccttgatcaa gttctgcaag caaaactcgt
      121 tggacgtgct tgactgtacc ccgaccgtgc tcgggttgtt gctggcggaa gggttgttgg
      181 aagaagcggt accggcagtc gtattcgtcg gtggcgagcc tatcgatcag cacacctggg
      241 agttgctggc cgcgtcgcag aggatctcgt tctacaacgt ctatggtccg accgagtgta
      301 cggtaaatgc cacgatcagc cctgtgagca aagagcagaa gcgagcgagc attggtggtt
      361 cgctgaccaa cgtgcaggta tacatattgg atcgcgatct gtcacctgtt ccaatcggag
      421 tgcgtggcga aatctatatc ggtggtgccg gggtcggtcg tggctatacc ggcagacctg
      481 atctcaccgc ggagcggttt gtgccagatc cttacagcga cgcacctggc agtcggttgt
      541 ataagaccgg cgatcaggcg cgctattttg ctgatggcaa gatcgacttc atcggtcgcc
      601 tcgatcagca ggtaaaggtg cgaggctacc ggatcgagcc aggcgagatc gaagcggcgc
      661 tcgaacaaca tccggcggtc gccaacgcgg ctgtcgtgat gggccaacgc tccgcttccg
      721 acgcgcaact cctggcttat ctggtcgcct catcgccgat cgacgatgcg ctgctgcgct
      781 ccttcctcgc tgattcgctg ccgcagtata tgatccctgc cgtcttcatc acgctggagt
      841 ctctgccgct gaccgcgagt ggcaagctcg accggctggc gctgcccgac cctcccaccg
      901 tcactagccg acctgagcga ctcagctaca gcctggaccg tcccacccag accgccatcg
      961 ctgaagtgtg gaccgaggtg ttgggattgg accacgtcgg cttagacgat aacttcttca
     1021 atctgggcgg gcactcgctg ttggcgacac aggcggcctc gcgactgcgc cagtatttca
     1081 acatagagtt gccgctgcgc aaattgtttg aagcgccgac ggtgcgggag ttggcggcag
     1141 tgatcgacag cgagttgagc ccgaggcaga aagggacgga gataagagcg cgggagaggc
     1201 acgagccggt cgcgttgtct tacgcacagc agcggctgtg gttcctggac cagctggagc
     1261 cgggcagcga cagctacaac atcgcggcgg cgctgaggct ggaaggaagc ctgaatgaag
     1321 aggcactcgg aagagcgctg caggaggtag tgcggcgaca tgaggtgctg cggacgagga
     1381 tcgaggtgat aggaaccgcg ccctaccagg tgatcgatga gtcagtggtg ctgagcctgc
     1441 cgctgataga cctcagtgag ctggaggagc agagccgggg agcggccgct gagggcgtga
     1501 agcgggagga ggcgagtgca gggttcaacc tgagcacggg accagtgctg cgggcgaagc
     1561 tgatcaagca aggggcgcag gaccatctgc tgctggtgac gatgcaccac atcgtgtcgg
     1621 acgggtggag cataggcgtg ctggtcaagg aattcagtgc actgtacgag gcctatcgta
     1681 gaggagagga gtcgccgcta ccggaactgc cggtgcagta cgcggactac gcgctgtggc
     1741 aaagggagtg gttgcagggc gaggtgctgg acgagcaact gcgctactgg gaggagaagc
     1801 tggcgggggc gccggccatg atcgagttgc cggccgaccg ggcgcgagga gcgttccgag
     1861 ccggaggtgg gacagccggg cgggtgcgcg tggagttcga c
//
LOCUS       DASRPQ010002135         1039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1524319, whole genome shotgun sequence.
ACCESSION   DASRPQ010002135 DASRPQ010000000
VERSION     DASRPQ010002135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1524319"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..543)
                     /locus_tag="VFD73_24190"
     CDS             complement(<1..543)
                     /locus_tag="VFD73_24190"
                     /inference="COORDINATES: protein motif:HMM:NF038403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease prefix domain 1-containing protein"
                     /protein_id="HZI77076.1"
                     /translation="MRIEHWLYSVPLRLRSLLLRRRVEQDLDEELQYHLERNTEQFMA
                     QGLAPAEARQAALRAMDGLTQRKEECRDMRRVNLVENTLQDIRYGVRVLAKSPGFTAV
                     AVLTLALAIGANSVVFGVLNALILRPLDLPRVESLYGTQRKADRYGAESYPNYIDLRD
                     RNRTFDGLAAYSIEAAGLDTG"
     gene            complement(547..882)
                     /locus_tag="VFD73_24195"
     CDS             complement(547..882)
                     /locus_tag="VFD73_24195"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HZI77077.1"
                     /translation="MSRPSDLVQGTLDLLLLKILALEPLNGWAISQRLKQVSGDVLQV
                     SDGSLYPALHKLEQEGWITAEWKASENNRRAKFYSLTRLGRRQLQKETANWTRLSDAI
                     TQVVRLEEA"
BASE COUNT          191 a          314 c          332 g          202 t
ORIGIN      
        1 gcccgtatcc agccctgccg cctcgatgga gtatgcggcc aggccgtcga aggtgcgatt
       61 gcggtcgcgg agatcgatgt agttgggata ggattccgcg ccatagcgat cggccttgcg
      121 ctgagttcca taaaggctct ccacgcgcgg caagtcgagc gggcgcagga tcaacgcgtt
      181 caggacgccg aagacgacgg agttggcgcc gatcgccagt gccagcgtaa ggacggcgac
      241 ggccgtaaat cccggggact tcgcaaggac gcgcacgcca tatcggatgt cctggagagt
      301 attttcgacg agatttacac ggcgcatgtc gcgacactcc tctttccgct gggtaagccc
      361 gtccatggca cgcaatgcgg cctggcgcgc ttccgcggga gccaggccct gcgccataaa
      421 ctgctcggtg tttcgttcca ggtgatactg cagctcttca tccaggtcct gctctacgcg
      481 gcggcggagg aggagggacc gtaagcgcag gggcacggaa tacaaccaat gttcgatgcg
      541 catgactcat gcctcctcga gccgcaccac ctgggtgatg gcatcggaca gccgggtcca
      601 gttggccgtt tccttctgaa gctgccggcg gcccaggcgc gtgagcgagt agaacttcgc
      661 gcggcggttg ttctcgctgg ccttccactc ggcggtaatc cagccttcct gctcgagttt
      721 gtgcagggcc gggtagagcg acccgtcgct aacctggagg acgtcgccgg atacctgctt
      781 caggcgctgg ctgatggccc agccgttcaa cggctcgagg gccaggattt tgagaagaag
      841 gaggtccaga gttccctgga ccaggtcgga tggcctgctc atgacactcc tatcggttac
      901 cgaggacaga atatcaccga ctcctctcgg taagcaagag gaaaatgcag agccgcgtcc
      961 ctcgtcgcct gggtccggtt cccgtccgct gtcaaccgtt tttctggctt ccaggctgga
     1021 aaatggtatc aacgccacg
//
LOCUS       DASRPQ010002136         1882 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1524323, whole genome shotgun sequence.
ACCESSION   DASRPQ010002136 DASRPQ010000000
VERSION     DASRPQ010002136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1524323"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1882)
                     /locus_tag="VFD73_24200"
     CDS             complement(<1..>1882)
                     /locus_tag="VFD73_24200"
                     /inference="COORDINATES: protein motif:HMM:NF024298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HZI77078.1"
                     /translation="RQTQERLLLAPLLARLQSSVPGHVEVEPRLRSLLSEVRERALAV
                     QGYGPANLVALLRLLRGDLRGLDLSHLTLRGAYLQGVEMQDTTLAGARLYECVLTETF
                     DAITAVAISPSGKFWATGSRQGRVWVWRENGHTLHLALQAHTDAVWALAFSPDERTLA
                     SGSLDGSVKLWEVESGIVRWSGWQTMGIDCLAFAPDGDVLASGGYDATMRLWEASLGT
                     PLADVPHPGPITALAWSPDGRLLASGDVAGTIRLWEITSRGRAACVEILAGHSSWVRG
                     LAFAPDGTSLASASWDGSVKLWELGEGGRLRRQLSGHTEEVQCLAWSPDGRTVASGSF
                     DHTIRLWHGEAGSSSTVLQGHAAAVNGLAFTPDSRQLLSGSEDGTMRLWEVEGGQCVR
                     VLQGYASTLYDLDWSPDGKELASVGSDTEVCLWEVEGRKPPRVLRGHTWTVYGVAWRP
                     DGHVLATSGWDRSIRLWDPTTGSCAQILRDLDHPDTNFFGVAWSPDGKLLACGTLLQG
                     VRVWNVTTGSQRGIGQAHATWIRRVAWSPDGTRLVGGGEDGHVSVWEVSEGTQFLRLA
                     GHHGAVRSVVWSPDGRRLASGGGGREGGELFVWDAHSGERLAALQGLASVLYAVAWHP
                     VGD"
BASE COUNT          329 a          722 c          545 g          286 t
ORIGIN      
        1 gatccccgac cggatgccag gcgactgcat agagcacact cgccagcccc tgcagggcgg
       61 ccaggcgctc cccactgtga gcatcccaca cgaagagctc cccgccctct ctgccaccac
      121 caccggaggc cagccgcctc ccgtcgggac tccagacaac gctccggacg gccccgtgat
      181 gtcccgccag ccgcaggaac tgcgtgccct cggagacctc ccacacagag acgtggccat
      241 cttccccacc accgaccagg cgcgtgccat ccgggctcca ggccacgcgc cggatccagg
      301 tggcgtgcgc ctgtccgatc ccacgctggg agccggtggt cacattccac acgcgcaccc
      361 cttgcagcaa ggtgccgcag gccagaagct tgccgtctgg actccaggcc accccgaaga
      421 agttggtgtc ggggtggtcg aggtccctca ggatctgggc acaggatcct gtggttgggt
      481 cccacagccg gatgctccga tcccacccgc tcgtggcgag cacgtgtcca tcgggacgcc
      541 atgccacgcc gtacactgtc catgtatggc cgcgcaacac acgaggcggc ttgcggccct
      601 ccacctccca gaggcagacc tcggtatcgg aaccgacact ggcgagctct ttgccatccg
      661 gactccagtc aagatcatag agggtgctcg cgtatccctg taggacccgc acacactgcc
      721 ccccctccac ctcccacagc cgcatcgtcc catcctcact gccactgagc agctggcggc
      781 tgtcgggggt gaaggccagc ccattcaccg cagcagcatg tccctgcagc actgtcgagg
      841 aactccctgc ttccccatgc cacagccgga tcgtgtggtc aaagctgcca ctggccacgg
      901 tgcgtccatc tggactccag gccaggcatt gcacctcctc cgtatggccc gaaagctgcc
      961 ggcgcaggcg gcctccttct cccaactccc agagcttgac gctgccatcc cagctcgcgc
     1021 tcgccaagct tgtgccgtcg ggagcaaagg ccagtccgcg cacccaactg ctatgcccgg
     1081 cgaggatctc gacgcaggcg gctctcccgc gggacgtgat ctcccacagc cgaatggttc
     1141 ccgcgacgtc gccactggcg agcaggcgtc catccgggct ccaggccagc gcggtgatcg
     1201 ggccaggatg cggcacatcc gccaggggcg tgcccagcga agcctcccac agccgcatag
     1261 ttgcgtcata tcccccactg gcaagcacgt ctccatccgg agcaaaggcc agacagtcga
     1321 tgcccatggt ctgccagcct gaccagcgta cgatcccact ctcgacctcc cacagcttga
     1381 cgctgccatc caggctcccg ctggccagcg tccgttcgtc cggactaaag gcgagggccc
     1441 agaccgcatc cgtgtgcgcc tgcaaggcca gatgtaaggt gtggccgttc tctcgccaca
     1501 cccatactct cccctgcctg ctgcccgtgg cccaaaactt gccgctcggg ctgatggcca
     1561 ccgcggtgat ggcatcgaag gtctcggtca agacgcactc gtaaagcctc gctccggcaa
     1621 gcgtggtatc ctgcatctcg accccttgca aataggcgcc ccgcagggtc aggtgcgaca
     1681 ggtccagccc acgcaggtcc ccgcgcagca gccgcagcag cgccaccagg ttcgctggcc
     1741 catacccctg gacggcaagg gctcgctcac gcacctctga gagcagggag cgcaagcgcg
     1801 gctccacctc gacgtgccca ggcacactgc tctgcaggcg ggccaggagg ggagccagca
     1861 gcagccgctc ctgggtctgg cg
//
LOCUS       DASRPQ010002137         1024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2435386, whole genome shotgun sequence.
ACCESSION   DASRPQ010002137 DASRPQ010000000
VERSION     DASRPQ010002137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2435386"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(129..>1024)
                     /locus_tag="VFD73_24205"
     CDS             complement(129..>1024)
                     /locus_tag="VFD73_24205"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HZI77079.1"
                     /translation="RAKLKLVLVHVPNVLVEPGPVYAKVELAMQKADREYLKSVTARL
                     RERLGRSVSSAVLQGIPVAQTLATYTRELGADLVIMTTHGRGGLRRAWLGSVTDQSVR
                     SSEIPILVIRARQEGAAEPATELREIVVPLDGSPLAEAALKPAIELGRLWDAELSLVQ
                     IVRPIILTAPHLTFPSGYSEQVTAIRRELAQDYIRDVAERLRESGVKANGVAVIAGSV
                     PETLIDLAAPERTSLMVVATHGRGGMKRLMLGSVADKLVRGAKVPLLVVRPPARRAAR
                     EGKKSGSAPLRMHSDGAVFVV"
BASE COUNT          183 a          367 c          300 g          174 t
ORIGIN      
        1 cacccggcgc agctcgctgg cagtgccgag cctgcggtca ccgttggcga cccgagagcg
       61 aggtcatcgg cggttcctaa gcttacctgc atccgcctct ccacgggcca gtcttgtctc
      121 tggcaccctc acacgacgaa cacagcgcca tcagaatgca tgcgtagcgg cgcggagccg
      181 ctcttctttc cctcccgagc cgctcgccgg gccggtggtc tcaccaccaa cagcggaacc
      241 ttggccccgc gcaccagctt gtcggccacg cttccgagca tgagccgttt catcccccca
      301 cgaccatgcg tcgccacgac catcagactg gtccgctccg gcgcggcgag atcgatgaga
      361 gtctcaggca ccgagccagc gatcacggcg actccgttgg ccttcactcc agattctcga
      421 aggcgctccg ccacatccct gatgtagtcc tgggccaatt cgcgccggat ggccgtgacc
      481 tgctcggagt aacccgaggg gaacgtcagg tgcggtgcgg tcaagatgat gggcctcacg
      541 atctgtacca gcgaaagctc ggcgtcccac aaacggccca gctcgatcgc aggcttcagc
      601 gccgcctcag ccagcggcga gccatccagc ggcacaacaa tctcccggag ctccgtcgcc
      661 ggctcggccg ctccttcttg tctggcccga atgaccagga ttgggatctc ggagctccga
      721 accgactgat cggtgacgct gccgagccag gcacgacgga gcccaccgcg gccgtgcgtt
      781 gtcatgatga ccagatcggc tcccagctcg cgggtatatg tggccagagt ttgcgcaacg
      841 ggaattccct ggagaaccgc tgaggaaacc gaacgcccta gccgctcgcg cagccgagcc
      901 gtgacgctct tcaggtattc gcgatcggcc ttctgcatgg ccaactccac cttggcgtat
      961 accgggccgg gctccaccaa gacgttcggc acatgcacca gtaccagctt gagcttggca
     1021 cgag
//
LOCUS       DASRPQ010002138         2447 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_875386, whole genome shotgun sequence.
ACCESSION   DASRPQ010002138 DASRPQ010000000
VERSION     DASRPQ010002138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2447
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_875386"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2447)
                     /locus_tag="VFD73_24210"
     CDS             complement(<1..>2447)
                     /locus_tag="VFD73_24210"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HZI77080.1"
                     /translation="EVGPTSPEELEHIIRGGGRRGEIYRKLRDLRDRYADEIRRRFPK
                     IPRRVSGYNLDDLLPENGFNVARALVGTESTCVTILQATLHLVPSPKARSLLILGYSD
                     VFSAGDHVTDILPYEPTALEGIDRLLFEWVRAKGDKNANLDLLPPGGGWLLAEFGGES
                     KEDSDEQARRVMEMLKKKPNPPSMKLYDNPKEEEMIWKVRQGSLGSTAWVPGRPDTWE
                     GWEDSAVAPEKVGDYLRDLRSLMQRHGYKTSLYGHLGQGCVHCRIEFDLYTAAGIADY
                     RSFMEEATSLVVKYGGSFSGEHGDGQSRAEFLPKMFGDRLVQAFREFKPIWDPEGRMN
                     PGKVVDPYRITDNLRLGPDYNPPQPKTHFKYPADRSTFSRAVLRCVGIGECRRQGHQT
                     MCPSYMVTREEKHSTRGRARLLWEMMNGEVVAGGWKSEGVKEALDLCLACKGCKHDCP
                     VNVDMATYKAEFLSHYYKGRVRPRHAYVFGWIHIWSRLAALAPSAANLVSQTPLLREV
                     AKWVAGAAPQRRLPPFAPQSFQHWFRRHRPANPAGPPVVLWPDTFNNYFHPDTAIAAV
                     EVLEDAGFLVKVPQSDMCCGRPLYDYGFLDMAQRWLLQILRTMRHEIQNGTPFVVLEP
                     SCCAVFRDELTNLFPNNEDAQRLRGQTFLLSELLQQRAPHYQIPRLDRKALVHSHCHH
                     KTIMGLTDEEKVLERLGLRFDIPESGCCGMAGAFGFERGDHYDVSVACGERVLLPAVR
                     QASEDTLIVADGFSCREQISQTTEREALHLAQVLRMALHHGEPMSKGSRPESALVRSR
                     RNELRKGNLRLAAMVAGG"
BASE COUNT          416 a          794 c          784 g          453 t
ORIGIN      
        1 ccgccggcca ccatcgccgc caatcggaga ttgcccttcc gcagctcatt gcgccggctc
       61 cggaccagcg ccgactcagg gcgggaaccc ttgctcatgg gttcaccgtg gtgcagtgcc
      121 atcctgagaa cctgcgccaa atggagtgcc tcgcgctcag tggtctgaga gatctgctcg
      181 cggcagctga acccgtcggc gacgatgaga gtgtcctcgc ttgcctgccg caccgctggg
      241 agcaacacgc gctcgccgca agcgaccgac acgtcgtaat gatcgccgcg ctcgaagccg
      301 aaggctccag ccatgccgca gcaccctgac tcgggaatgt cgaatctgag gcccagccgc
      361 tcgagcacct tttcttcatc ggtcaggccc atgatggtct tatgatgaca gtggctgtgc
      421 accagcgcct ttcgatcgag ccggggaatc tgataatgcg gcgcgcgctg ctgcagcagt
      481 tcgctcagca gaaaggtctg gccccgaagc cgttgggcgt cttcgttgtt ggggaagagg
      541 ttggtcagct catctctgaa aaccgcgcag cagctcggct ccagtaccac gaacggcgtc
      601 ccgttctgaa tctcgtgccg cattgtccgg aggatctgga gcagccaacg ctgggccatg
      661 tcgagaaagc cgtagtcata gagcgggcgg ccgcaacaca tgtcgctctg gggcaccttg
      721 accagaaatc cggcatcctc gagcacctcc accgccgcaa tcgcggtgtc cggatggaag
      781 tagttgttga aggtgtcggg ccagagcacc acgggaggtc ccgcaggatt ggccgggcga
      841 tgccgccgga accagtgctg aaaactctgc ggcgcaaagg gggggagccg tcgttggggc
      901 gccgcaccgg ccacccattt ggcgacctcg cggaggagcg gcgtctgcga cacgaggttc
      961 gctgccgaag gtgccagggc cgccaggcgg gaccagatgt ggatccagcc gaagacgtag
     1021 gcgtggcggg gccgcaccct tcctttatag tagtgcgaca aaaactccgc cttgtacgtc
     1081 gccatgtcga cgttcaccgg gcagtcgtgc ttgcagccct tgcacgcgag gcagaggtcg
     1141 agcgcttcct tcaccccctc gctcttccag ccgcctgcca cgacttcccc gttcatcatc
     1201 tcccagagca gccgggcacg tccccgggtc gagtgcttct cctcccgagt taccatgtag
     1261 ctggggcaca tggtctggtg tccctgccgg cggcactcgc cgatgcccac gcatcggagc
     1321 accgcgcggg agaaggtcga gcggtcggcc gggtacttga agtgggtctt cggctggggc
     1381 gggttgtagt cggggccgag ccgcaggttg tcggtgatgc ggtagggatc gacaaccttg
     1441 cccgggttca tccttccttc cgggtcccag atcggcttga actcgcggaa cgcctgaacc
     1501 aggcggtcgc cgaacatctt gggcagaaac tcggcccgcg attggccatc tccgtgctcg
     1561 ccggagaacg agcctccgta tttcacaacc agcgaagtcg cctcttccat gaacgatcgg
     1621 tagtcggcga tcccggcggc ggtatagagg tcgaactcga ttcggcagtg gacgcatccc
     1681 tggcccaggt ggccgtagag cgaggtcttg tatccgtgcc gctgcatcag ggagcgcagg
     1741 tcccgcaggt aatcgccgac tttctccgga gccacagcgg agtcttccca cccctcccag
     1801 gtgtcggggc ggcccggcac ccaggcggtg gagccgaggc tcccctgccg caccttccag
     1861 atcatctcct cctctttggg gttgtcgtac agcttcatcg agggaggatt cggcttcttc
     1921 ttgagcatct ccatcacccg gcgggcctgc tcgtcggaat cttccttgga ctcaccgccg
     1981 aactcggcca gcagccagcc tccgccgggt gggaggagat cgagattggc gttcttgtcg
     2041 cccttggccc ggacccactc gaagagaagg cggtcaatcc cttcgagcgc cgtcggctca
     2101 tagggaagga tgtctgttac atggtcgccg gcggagaaga catcagaata gccgaggatc
     2161 aggagcgacc gcgccttggg gctgggcacc agatgcagtg tcgcctggag gattgtgaca
     2221 caggtactct cggtgccgac cagtgccctc gcgacgttga acccgttttc cggcagcagg
     2281 tcgtcgaggt tgtacccgga gactcgccgc gggatcttgg gaaaccggcg ccggatctca
     2341 tcggcatagc ggtcgcgcag gtcccggagc ttacggtaga tctcccctct gcgcccgccg
     2401 ccacgaatga tgtgctccag ctcctccggg ctggtgggcc ccacctc
//
LOCUS       DASRPQ010002139         2062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4643111, whole genome shotgun sequence.
ACCESSION   DASRPQ010002139 DASRPQ010000000
VERSION     DASRPQ010002139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4643111"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1093)
                     /locus_tag="VFD73_24215"
     CDS             complement(<1..1093)
                     /locus_tag="VFD73_24215"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HZI77081.1"
                     /translation="MPLSFFHPVVASWFQQRFGEPTPPQRSGWEAIRSGRHTLIAAPT
                     GSGKTLAAFLHSLDQLFREGLNGPLPDETRVVYVSPLKALSADIHLNLAEPRREIRRL
                     AEESGLLAPRITAAIRSGDTPAAERAAMIKKPPHILVTTPESLYLLLTAQRSREMLRT
                     VRTVIVDEIHAVVESRRGAHLALTLERLAHVAGRPVQRIGLSATVHPIAEVGEWLVGD
                     AAQNADQPAIIDSGHRRTLDLALELPRSPLEAVMSGEVWDELYERLTELIKAHRTTIV
                     FVNTRRLAERVARHLGERLGEEAITAHHGSLSKETRLDAEERLKGGRLKALVATASLE
                     LGIDIGHVDLVCQLGTPRRISTFLQRVGRS"
     gene            complement(1122..>2062)
                     /locus_tag="VFD73_24220"
     CDS             complement(1122..>2062)
                     /locus_tag="VFD73_24220"
                     /inference="COORDINATES: protein motif:HMM:NF014375.4"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HZI77082.1"
                     /translation="LTGPTHPRYPVRVAAERSGVNPHVLRAWERRYRVVTPHRSQAGQ
                     RLYSDLDVQRLGLLRQLTGQGHSISRLATLSLEELERIAAEDRDHLRRSSGDSSPPQA
                     LELRLAAIAAAQRLDAGELQTILERAAVSLGLTAFLEDVAGEAIKQIGHGWENGSISV
                     GQEHLATAVFRRVLDWILQTLVVRDPTSRLVMATPPTQLHELGALLAAAAAAIEGWDV
                     AYLGADLPVGEILGAASKTKARAVALSLVPPTHRSLVQELIELRRGLRSEVPLFVGGA
                     AVDQEPELFASVGARVMGSLADFRAELRRLRSQDKL"
BASE COUNT          380 a          655 c          682 g          345 t
ORIGIN      
        1 cagaccggcc cacccgctgc aggaaggtgg agattctccg aggcgtgccg agctggcaca
       61 ccagatcgac gtggccgatg tcgatcccga gctccaggga cgcagtggcg actagtgcct
      121 tgagacggcc gcccttgagc cgctcttcgg catcgagacg ggtctctttc gagagacttc
      181 cgtggtgagc ggttatcgct tcctctccca aacgctcgcc caggtgccgc gccactcgtt
      241 cggccaatcg ccgggtgttc acaaagacga tggtggtgcg gtgagccttg atgagttcgg
      301 tcagacgctc gtacagctcg tcccatacct cgccggacat cacggcctcc aaaggagacc
      361 tggggagctc cagcgcaaga tcaagggtgc gacggtggcc ggagtcgatg atcgccggct
      421 gatcggcgtt ctgagccgca tctcccacca gccactctcc aacctcggcg atcgggtgca
      481 ccgtggcgga gagacctata cgctgcaccg ggcgcccggc gacatgggcc agccgctcca
      541 gggtgagcgc aagatgagcg ccccggcgcg attccacgac cgcgtggatc tcatctacga
      601 tgaccgtccg gacggtgcgg agcatctcgc ggcttcgctg tgccgtgagc agcaggtaga
      661 gcgattcggg ggtggtgacc aggatgtggg gcggcttctt gatcattgcg gcgcgttccg
      721 cggccggtgt atcgccggag cggatcgcgg cggtaatacg gggagccagg agtccgcttt
      781 cctccgcaag gcggcgaatt tctctccgag gctctgcgag attgaggtgg atatccgcgc
      841 tcagggcttt gagcggcgat acgtagacca ctctggtctc gtcgggcagc ggcccattga
      901 ggccctcacg gaacagctgg tccagagaat ggagaaaagc ggccaacgtt tttccggagc
      961 cggtcggcgc cgcaatcagg gtatgccggc ccgatcggat ggcctcccac ccggagcgct
     1021 gtgggggcgt gggctcaccg aatcgctgct ggaaccagct cgcgacaaca ggatggaaga
     1081 aggacagcgg catcggcgaa atatagccga aaaccggggg ttcagagctt gtcctgcgac
     1141 ctcaaccggc gaagctcagc gcgaaaatcc gccagcgacc ccatgactct tgctcctacg
     1201 ctcgcaaata actcgggctc ctggtctacc gcggcgccgc cgacaaagag cggaacttct
     1261 gagcgcaatc cacggcgaag ttcaatcagc tcctgcacga gtgatcgatg ggtgggcggc
     1321 accaggctca gggcgaccgc tcgggccttc gtctttgatg cggccccgag gatctcgccg
     1381 accggcagat cggcaccgag ataagccaca tcccaaccct caattgcggc ggcggcagcg
     1441 gctagtaacg cgccgagttc atggagctgt gtggggggag tggccatgac cagccgcgac
     1501 gtcggatccc gcaccaccaa ggtctggaga atccagtcca gcactcggcg aaacacagcc
     1561 gtggccaaat gctcctgccc caccgagatc gagccgtttt cccagccgtg acctatttgc
     1621 ttgatcgcct cacctgccac gtcctcgagg aacgcggtga ggccgaggct cacggcggcc
     1681 cgctcgagga tggtctgcag ctccccggca tccagacgct gagccgcagc gatggccgcc
     1741 aaccgtaact ccaacgcttg aggtgggctc gaatctccgg aagaccgccg aagatggtcg
     1801 cgatcttcgg ccgcgatgcg ctccagctcc tccagagaga gggtggcgag acggctgatg
     1861 ctgtggccct ggccggtgag ctgccgaagc agacctaaac gctgaacgtc cagatcggag
     1921 tagagccgtt gaccggcctg actccggtgt ggggtgacca cccggtagcg ccgctcccag
     1981 gctcggagga cgtgaggatt gacgccactt ctctccgccg cgactcgaac ggggtatcgg
     2041 gggtgggtcg ggcccgtgag ca
//
LOCUS       DASRPQ010002140         1335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1524629, whole genome shotgun sequence.
ACCESSION   DASRPQ010002140 DASRPQ010000000
VERSION     DASRPQ010002140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1524629"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..419)
                     /locus_tag="VFD73_24225"
     CDS             complement(<1..419)
                     /locus_tag="VFD73_24225"
                     /inference="COORDINATES: protein motif:HMM:NF014759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77083.1"
                     /translation="MIVHLVDGTYELFRHFYGLRRFNKGKDAPLGAVFGVLNTLLELI
                     ETGATHIGVATDHVIESFRNELWPGYKTGAGIDPALLSQFQPLEDAIAALGVTVWPMV
                     ELEADDALASASHIASAELAVEKICIWTPDKDLAQCV"
     gene            complement(431..1015)
                     /locus_tag="VFD73_24230"
     CDS             complement(431..1015)
                     /locus_tag="VFD73_24230"
                     /inference="COORDINATES: protein motif:HMM:NF024922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate-dependent dioxygenase AlkB"
                     /protein_id="HZI77084.1"
                     /translation="MEENREQITLFTQTDALPPGFLYQPELLSAEEEQHLLGEIRQLP
                     FKEFLFQGFVGKRRVVSYGWQYDFNERALRQAQEIPAFLLPLREAAGSFAGLVPEQLA
                     QVLLTEYDAGATIGWHRDKSVFGDVVGISLLSACRFRFRRKVGSDWQRASLTAEPRSV
                     YLLRGPSRTEWEHSIPAVDALRYSLTFRTLRSKG"
     gene            complement(1036..>1335)
                     /locus_tag="VFD73_24235"
     CDS             complement(1036..>1335)
                     /locus_tag="VFD73_24235"
                     /inference="COORDINATES: protein motif:HMM:NF018963.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase-like
                     domain-containing protein"
                     /protein_id="HZI77085.1"
                     /translation="EAMERSLDQHPRFVVPTKCIPSVSDRIQTGDVLGFATEIPGLDA
                     THTAFAHRAKDGVLRVLHAPLSGGVVQVTSSTLAEYVAAIRHATGILVARPVYGS"
BASE COUNT          271 a          397 c          425 g          242 t
ORIGIN      
        1 tctacacact gcgcgagatc cttgtccggg gtccaaatac agatcttctc caccgcgagc
       61 tcagcggaag caatatggct ggcggacgcg agagcatcgt cggcctccaa ctcgaccatc
      121 ggccagaccg tcactcccag agcggcgatt gcgtcttcga gtggttgaaa ttggctgagg
      181 agtgcgggat cgatgccggc cccggtcttg tagccgggcc agagctcatt gcggaacgac
      241 tcgatgacat ggtcggtggc aacgccgatg tgcgtggctc ccgtctctat cagctcgagc
      301 agggtattca gcaccccaaa caccgctccc aagggtgcat cctttccctt gttgaaccgg
      361 cgcaggccgt aaaaatggcg gaacagctcg taggttccgt cgacgagatg gacgatcatt
      421 gggttctgaa tcagcctttg gagcgcaacg tccggaaggt caacgaatac cgaagagcgt
      481 caaccgccgg aatgctgtgc tcccattccg tgcgggaagg gccgcggaga aggtagaccg
      541 agcgcggctc cgccgtgagt gaggcgcgct gccaatcgct gccgaccttg cggcggaaac
      601 gaaagcggca ggccgacagg agggagatgc cgacaacatc accgaagaca ctcttatccc
      661 ggtgccagcc gatggtcgcg ccggcgtcgt actcggtgag cagaacctgg gcgagttgtt
      721 ccggaaccag cccggcgaag ctcccggcag cttccctcag gggaagcaag aatgccggga
      781 tctcttgtgc ctgccgcagt gcccgctcat tgaagtcgta ttgccacccg taggagacga
      841 cgcggcgttt gccgacaaat ccctgaaata agaactcctt gaacggcagc tgccggattt
      901 cgcccaaaag gtgctgctct tcttcagcac tgaggagctc tggctgatag aggaatcctg
      961 gcgggagcgc atcagtctgg gtgaacaagg ttatctgttc tcggttctcc tccacgccgt
     1021 ctccttcgct ctggatcagg atccgtagac cgggcgagcc accagaatgc cggtagcgtg
     1081 ccgaatggca gccacgtact cggcgagcgt gctgctggtg acctgtacga caccaccgga
     1141 cagcggagcg tgcagcacgc gaaggacccc atccttggct cggtgcgcaa aggcggtgtg
     1201 agtggcatcg aggccgggga tctcagtcgc aaagcccagc acatcgccgg tctgaatacg
     1261 gtcactgacg gaggggatgc acttcgtggg gacgacgaag cgtgggtgct ggtccaggga
     1321 gcgctccatc gcttc
//
LOCUS       DASRPQ010002141         2371 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4315929, whole genome shotgun sequence.
ACCESSION   DASRPQ010002141 DASRPQ010000000
VERSION     DASRPQ010002141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4315929"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..944
                     /locus_tag="VFD73_24240"
     CDS             <1..944
                     /locus_tag="VFD73_24240"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI77086.1"
                     /translation="DKAAPAPLVLIANDQEWSARSLESILGPSGYSVVRAYTGQQALE
                     RARTAQPDLIILDAQMPDVHGFEVCRLLRNDPRFSATTPIVITTSGPSGRAQRLEAYS
                     AGAWEFLGQPLDGEALLLKLRTFLQCKQEVDTLRDESLLDPRTGLYNMRGLSHRAQEI
                     GADAFRRRDPLACVVFSPEPEGLNADGAPDEEVLRIAEQVGQLFKRAGRSSDAIGRLG
                     HAEFGVIAPATSTEGALRLIQRLGGSIEASPIPVRGGERSLRVRAGYCAVPDFAESPV
                     DAVELLLRATTALRDLVRDGDAEQVRAFEPAPLSYPS"
     gene            1197..>2371
                     /locus_tag="VFD73_24245"
     CDS             1197..>2371
                     /locus_tag="VFD73_24245"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HZI77087.1"
                     /translation="MVSPLTHTERKIPVVPDGPARDPLSIPGEVKASIRILVVDDERT
                     LRESCASVLQMDGYNVTLIGRGEEALETVRRRKFDIVLVDLYMSQVSGLEILQATLEA
                     YKDTIVVVMTGNPSVTSSIEALRAGAWDYLPKPFSATHLQVLIGRASHAVMMSREAQD
                     LRVQLMKQIGHSDKIALIGISPLFRKAVDLARKVAGTDASVFISGESGTGKEVIAQFI
                     HQNSRRAGRALVPINCAALPEPLLESEMFGHRKGAFTGADRDKPGLLETANGGTLFLD
                     ELTEMSMPLQAKLLRVIQDGVVRRVGSEQQDAVVDVRFISATNREPQEAVDEGALRGD
                     LFYRLRVVPIKLPPLRKRPEDIPLLANHFLTYYWQRHRQMGDRLPRLSEASIAFLRSR
                     "
BASE COUNT          425 a          752 c          748 g          446 t
ORIGIN      
        1 gagacaaggc cgctcccgcc ccgctcgtcc tcatcgccaa cgaccaggaa tggtctgctc
       61 gctcgctgga gagcattctg gggcctagcg gatactcggt ggtgcgggcc tacacggggc
      121 agcaggcctt ggaacgggca cgaacggctc aacccgatct catcattctc gacgctcaga
      181 tgccggatgt ccacggtttc gaggtctgtc gattacttcg aaacgacccc cggtttagcg
      241 ccaccactcc cattgtgatc acaacctcag gcccctccgg aagagcacaa cgtttagagg
      301 cgtacagcgc gggcgcctgg gaatttctgg gacagcccct cgacggagaa gcgctgttgc
      361 tcaagctgcg gacctttctg caatgcaagc aggaggtaga cactcttcgg gacgagagcc
      421 tgctcgaccc ccgcactggc ctctacaaca tgcgagggct ctcgcaccgg gcccaggaga
      481 tcggggccga cgccttccgg cgccgggatc ctctcgcgtg cgtggtgttt tccccggagc
      541 cagaagggct caacgctgac ggagctcccg atgaggaggt gctgcggatc gccgagcagg
      601 tgggtcagct gttcaagcga gcgggccgct cctcggacgc gatcggccgg ctgggacatg
      661 ccgagttcgg ggtcattgcg ccggccacct cgaccgaggg agcgctgcgc ctgattcagc
      721 ggctgggagg cagcatcgaa gcctccccaa tcccggttcg tggcggcgaa cgctcgctcc
      781 gggtacgcgc tggatactgt gctgtgcctg actttgcgga atcaccagtc gatgccgtcg
      841 agctgctctt acgggcaacc acggcacttc gggacttggt gcgggatgga gacgcagagc
      901 aggtcagagc gttcgagccg gccccgctga gctatccgag ctgatcgctc ccgctacagc
      961 tgtaggatgg aacccacggt gggtcaccga tttacggtca ctaactgttg acctgaggcc
     1021 tcacctgctt gacttccgcg tcaagttgtg gtaagaacgt tactaccgct gtgtctccgg
     1081 gacgcggttt ggtttcccgg atggcgactt tttagcccgg tttttccgct tcgattggcg
     1141 aggcggttct gagttaaacc gaccgccaga agcggtctcc ccgggagtcc cacaggatgg
     1201 ttagccccct cacccacacg gaacggaaga ttccggtcgt ccccgacggt ccggcacgcg
     1261 acccgctctc gatccctggt gaagtcaaag ccagcatcag gatcctcgtg gtggatgacg
     1321 agcgaaccct gcgggaaagc tgtgccagcg tgcttcagat ggacgggtac aacgtcacgt
     1381 tgatcggccg gggggaggaa gcgctcgaga ccgttcgtcg gcgcaagttc gacatcgttc
     1441 tggtcgatct ctatatgtcc caggtctcgg gactggaaat tctccaggcc acgctcgagg
     1501 cctacaagga caccatcgtt gttgtgatga ccggcaatcc cagcgtcacc agcagcatcg
     1561 aggcgctccg cgccggcgcc tgggactact tgcccaagcc gttctcggcc acccatctcc
     1621 aggtcctcat cggccgcgcc tcccacgccg tcatgatgtc ccgcgaggcg caggatctcc
     1681 gggtgcagct gatgaagcag atagggcaca gcgacaagat cgccctcatc gggatctcgc
     1741 ccctgttccg caaggcggtg gacttggctc ggaaggtcgc aggcaccgac gcctcggtct
     1801 ttatcagcgg ggagagcggg accggcaaag aggtcattgc tcagttcatt caccagaaca
     1861 gccgccgcgc ggggcgcgcc ttggtcccga tcaactgcgc ggcgctcccc gagcccctgc
     1921 tcgaatccga aatgttcgga catcgcaaag gcgcctttac tggtgccgac cgcgataaac
     1981 ccggcctgct ggagaccgcg aacggcggga cactcttcct ggacgagctg accgaaatgt
     2041 ctatgccgct tcaggcgaag ctgttgcggg tcattcagga tggggtggtt cgccgggtag
     2101 gaagcgagca gcaggacgcg gtcgtggatg tgcggttcat ttccgcgacc aatcgcgaac
     2161 cccaggaggc agttgatgag ggtgccctca ggggtgacct cttctatcga ctgcgggtgg
     2221 ttcccatcaa gctgccgccg ctgcgcaagc gacccgaaga tatccctctc ctggccaatc
     2281 acttcctgac gtactactgg cagcgccatc ggcagatggg cgatcggctg cctcggttga
     2341 gcgaggccag catcgccttc ttgcgttcgc g
//
LOCUS       DASRPQ010002142         2864 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_875552, whole genome shotgun sequence.
ACCESSION   DASRPQ010002142 DASRPQ010000000
VERSION     DASRPQ010002142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2864
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_875552"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..547)
                     /locus_tag="VFD73_24250"
     CDS             complement(<1..547)
                     /locus_tag="VFD73_24250"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI77088.1"
                     /translation="MALTAVTRTYLEMSSPDELRPAPTPTPEPKLERVRDCSVALFRF
                     LYREVGRTYHWTDRLDWSDSTIASYLADPDVSLWMLSWEGIPAGYFELKRDAEGGIEI
                     AYFGLTPGFIGRGWGKYLLTRAVGAAWELGTHRVWLHTSTLDHPAALPNYLKRGFRAV
                     RREVYHVSGAAGHRGSGAGKSE"
     gene            complement(624..1085)
                     /locus_tag="VFD73_24255"
     CDS             complement(624..1085)
                     /locus_tag="VFD73_24255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77089.1"
                     /translation="MRKLFILAAVAAVSAACHNRNENQVGAAPDQGRTDTTAVTHVLD
                     STRTGPPGEAGRPGNATITADSVGLDSTKIQPGAADTTAAGQKNSPTSAPQDTLGPRN
                     PGAGAIDSTSVRSDTSGARSENGAAPSDTSAMQHDTTMQRDTTMSDTTSNR"
     gene            complement(1289..1666)
                     /locus_tag="VFD73_24260"
     CDS             complement(1289..1666)
                     /locus_tag="VFD73_24260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77090.1"
                     /translation="MRYLLMLAAAASLAACHNRSGEETGAAPVKDSTAVAADTTAVTP
                     TDSTMGQRPGPADTTAAVPQDTTSTTTPAVDSTNAPTSTGNAPSDTTAQTRTDTSKAG
                     WSDSTSMGHDSTDMSMPADSAKQ"
     gene            complement(1868..>2864)
                     /locus_tag="VFD73_24265"
     CDS             complement(1868..>2864)
                     /locus_tag="VFD73_24265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HZI77091.1"
                     /translation="WNWLVSSLAAGATVVLYDGAPLSPPTMLWDMAAEEGITIFGTSA
                     KYLALSEKEGLEPARTHDLRALRAILSTGSPLSSASFDFVYQKIKSDVHLASISGGTD
                     IVSCFALGNPIAPVWRGELQTRGLGMSVEVFDERGRPIREQEGELVCTRPFPSMPVAF
                     WGDPTGAKYRQAYFEHFPGVWRHGDWARLTEHDGLIILGRSDATLNPGGVRIGTAEIY
                     RQVEAIPEVLESLVVGQDWQGDVRIVLFVRLRDGVGLTDDLARRIKQRIREFASPHHV
                     PRKIVAVADIPRTISGKITELAVRDMIHGRPVHNRDALANPAALELFRDLAELQQ"
BASE COUNT          482 a          929 c          898 g          555 t
ORIGIN      
        1 actccgactt ccctgccccg ctgccccggt gccccgctgc cccgcttacg tgatacacct
       61 ctctccgcac cgctcggaaa ccccgcttca agtagttcgg gagcgctgcc gggtgatcca
      121 gtgtactcgt gtgcagccac actcgatgcg tgccgagctc ccaggcggcg ccgactgccc
      181 gggtgagcag gtatttcccc cagccccgtc cgatgaaccc gggcgtcagc ccgaagtagg
      241 cgatctcgat gccaccctcc gcgtctcgct tgagctcgaa atagccggcg ggaatgcctt
      301 cccacgagag catccacagc gacacatcgg gatcagccag atagctcgcg atcgtgctgt
      361 cgctccagtc gaggcgatcg gtccaatggt aggtccgccc gacttcgcga tacaaaaagc
      421 ggaacaatgc cacgctgcaa tcccggaccc gttccagctt cggttccggg gttggcgtgg
      481 gcgccggccg gagctcgtcg ggcgatgaca tctcgaggta tgtgcgggtg acggcggtca
      541 gggccatgaa gccggtgctc gtaaatgtga aacgggcccc ggagtgtacc cagggcccgc
      601 tcactcggcc agcagtcggt cggctaccga ttgctggtag tgtcgctcat ggtcgtgtcg
      661 cgctgcatcg tggtgtcgtg ctgcattgcg ctggtatcgg agggggccgc gccgttctca
      721 gaacgcgccc cgctcgtgtc ggaccgaacc gacgtgctat cgatggcacc ggcacccggg
      781 ttgcgcggac ccagcgtgtc ctgcggtgcg gaggtgggtg aattcttctg tccggcagcc
      841 gtcgtgtcag cggcgcctgg ctggatcttc gtgctgtcca ggcctacgct gtcagcagtg
      901 attgtcgcat ttccgggccg gcccgcctct ccgggcggtc cagtgcgggt actgtcgagc
      961 acgtgagtca ctgctgtcgt gtcggtccgt ccctgatccg gcgccgcacc gacctgattt
     1021 tcgtttctat tgtggcaggc cgctgatacg gctgcgaccg ccgccagaat gaacaatttc
     1081 ctcatacggc gtacgctcct accgggggat ttgacggtcc gggccagctc gatccagcca
     1141 cggtttgggt ctacagaccg caatctggaa gggtgccgca acgatcacta ggtcgtgcat
     1201 cacaaacccg ggcagcgcgg atgcaggccg gcacaaaaaa acggcggccc cgaagatcac
     1261 ggggccgccg gtcgttctgc agagtgactt actgcttggc gctgtccgcc ggcatgctca
     1321 tgtcggtgct gtcatgaccc atgctggtgc tgtcgctcca acccgccttg ctggtatcgg
     1381 tcctggtctg ggcggtcgtg tcgctcggcg cattgccggt gctggtcggc gcgttggtgc
     1441 tgtcaacggc cggagtcgtg gtgctggtgg tgtcctgcgg aactgcggct gtggtatcag
     1501 caggtccggg ccgctgaccc atggtgctgt cagtcggcgt caccgccgtg gtgtcggcag
     1561 caaccgcagt gctgtccttc accggagccg ccccggtctc ttccccggaa cggttgtggc
     1621 aggccgccag cgacgccgcg gcagccagca tcaaaaggta tcgcatcgtg tgctcctcgg
     1681 gccaagggac cctgcccgcc tgagggtctc agccgctgtt gtccgtgtgc cgcgggctta
     1741 atgccaatga atagaagacc gcgccgatcc cagacgcgtc gcgagaatgt actccgactt
     1801 tttcaatccc gataggtcat ggatcacatg atacgcgggg cagcggggca gcgaggcggc
     1861 ggggcagcta ctgctgaagc tcggcgaggt cacgaaaaag ctcgagtgcg gccggattgg
     1921 ccagggcatc gcgattgtga accggccggc cgtggatcat gtcgcgcacc gcgagctcgg
     1981 taattttacc gctgattgtt cgaggaatat ccgccactgc aacaattttc ctggggacgt
     2041 gatggggact ggcaaactcg cggatccgct gtttgatccg gcgagccagg tcgtcggtca
     2101 ggccaacacc gtctcgcagg cggacaaaga gaacgatccg gacgtcgccc tgccaatcct
     2161 gaccaactac caggctttca agcacttctg gtatcgcttc cacctggcgg taaatctcgg
     2221 cggtcccgat ccgcaccccg ccagggttga gggtggcgtc gctccgtccc agaatgatca
     2281 gcccatcatg ctcggtcagg cgggcccagt cgccatggcg ccacactccg gggaagtgtt
     2341 caaaatatgc ctgccggtac ttcgctcccg tgggatctcc ccagaacgcc accggcatgc
     2401 tgggaaacgg tcgagtgcaa accaattcac cttcctgctc ccgaatcggg cgccccctct
     2461 cgtcgaacac ctcgacgctc atgcccaatc cccgggtctg cagctctccc cgccagaccg
     2521 gcgcaatcgg atttcccagc gcaaagcacg atacgatgtc ggtcccgccg ctgatgctcg
     2581 cgagatgaac gtcggatttg atcttttgat agacgaaatc aaagctagca ctcgagagtg
     2641 ggctgccggt tgaaagaatc gcgcgcagcg ctcggagatc gtgagtacgc gccggctcga
     2701 gtccttcctt ttccgagagc gcgagatact tcgcgctggt gccgaagatg gtaatccctt
     2761 cttcggccgc catgtcccac aacatcgtcg gtggcgagag cggcgcaccg tcatacagca
     2821 ctaccgttgc ccccgcggcg agactcgaga ccagccagtt ccac
//
LOCUS       DASRPQ010002143         2497 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_558894, whole genome shotgun sequence.
ACCESSION   DASRPQ010002143 DASRPQ010000000
VERSION     DASRPQ010002143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2497)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2497)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2497
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_558894"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..355
                     /locus_tag="VFD73_24270"
     CDS             <1..355
                     /locus_tag="VFD73_24270"
                     /inference="COORDINATES: protein motif:HMM:NF017013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MOFRL family protein"
                     /protein_id="HZI77092.1"
                     /translation="SICLIWGGETTVTFGDQPPGLGGRCQELALAAAAVLRDSSNPVA
                     FLAAGTDGRDGPTDAAGAVVDNHTWPAIAQAGRDPTRDLTSHNAYYALDSVGALLRTG
                     LTGTNVMDVMLGICG"
     gene            complement(362..811)
                     /locus_tag="VFD73_24275"
     CDS             complement(362..811)
                     /locus_tag="VFD73_24275"
                     /inference="COORDINATES: protein motif:HMM:NF024791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LytR C-terminal domain-containing protein"
                     /protein_id="HZI77093.1"
                     /translation="MAHPRAYRQILEQSRQHWRIGALALAAVVLTVGAAVVLRPRPAR
                     IAPPPVRPSERIIVEVLNGTRRQGAARAATRLLRRQGLDVVFLGNADSLSELTQVLVR
                     RGDPDKAHYVLTALGEGKLRIETDTLRRVDVSVILGDDFHPRMELHP"
     gene            complement(742..1266)
                     /locus_tag="VFD73_24280"
     CDS             complement(742..1266)
                     /locus_tag="VFD73_24280"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HZI77094.1"
                     /translation="MSPERLQHVQRVAALALEWAERLGVPDSERNRWLRAVWLHDALR
                     DAPDAVLEEWAGSIQGPPELRHGPASAARARAEGEDDRGVLDAVRYHSLGLPEWDMVG
                     RILYCADYLEPGRAFERERRAELAERLPREPRNVLREVARSRLIHTIESGWPILEPTA
                     RFWNSLASTGASAR"
     gene            complement(1332..1703)
                     /gene="panD"
                     /locus_tag="VFD73_24285"
     CDS             complement(1332..1703)
                     /gene="panD"
                     /locus_tag="VFD73_24285"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR00223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004068 - aspartate 1-decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HZI77095.1"
                     /translation="MQRHLMKSKIHRATITSAELHYEGSLTVDQELLDAADLVTYEEV
                     QVVNVNNGARFSTYVIPGPRGSGVLQLNGAAARQGLPGDLVIVISYGLYTEDEAEEHV
                     PCVVFVDSKNRVVRPQLRAES"
     gene            complement(1703..>2497)
                     /gene="panC"
                     /locus_tag="VFD73_24290"
     CDS             complement(1703..>2497)
                     /gene="panC"
                     /locus_tag="VFD73_24290"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HZI77096.1"
                     /translation="GRRVALVPTMGYLHEGHLALVDEARRRADAVALSIFVNPLQFGP
                     AEDLDRYPRDLPRDRALAASRGVDALFVPTAETMYPAGSEVRVVPGPIAERWEGAARP
                     GHFTGVLTVVAKLFHLVEPDLACFGRKDIQQLTLIKRMVRDLDWRIEIVDVATVREPD
                     GLALSSRNAYLQGPDRQSALMLSRALGVAHQAFCQGERKAVALEQRMRTALEENSGVA
                     VEYIAIVEPTSLIPGTVVDGRTIVAIAARVGGTRLIDNITLAEGLG"
BASE COUNT          454 a          827 c          787 g          429 t
ORIGIN      
        1 atcgatttgt cttatctggg gtggtgaaac caccgtgacc ttcggcgatc agccgccggg
       61 tctgggcggc cgctgtcagg agctggcact cgccgcggcc gcggtgcttc gagactccag
      121 caatcccgtc gcatttcttg ctgccggcac tgacggacga gacggtccga ccgatgccgc
      181 cggagcggtg gtcgacaatc atacctggcc tgcaatcgcc caagcaggac gcgacccgac
      241 gcgagacttg accagtcata acgcctacta cgcgcttgac tccgtgggcg cgctgctccg
      301 gacggggctc accggaacca atgtcatgga tgtgatgctg ggcatctgtg ggtagggcga
      361 actacggatg taattccatg cgagggtgga aatcatcgcc caggatgacg ctgacatcaa
      421 cgcgacgcag ggtgtcggtc tcgatccgga gcttgccttc accgagggca gtcaggacat
      481 agtgagcctt gtcaggatca cccctccgca ccagcacctg ggtgagctcc gagagagaat
      541 ccgcgttgcc cagaaatacc acatccagcc cctgtcgccg gagcagccga gtcgctgccc
      601 gcgccgcgcc ctgccggcga gttccattca gcacttcaac gatgatccgc tctgagggac
      661 ggaccggcgg cggagcaatg cgtgcgggcc tgggccgaag cacgacggcg gctccgaccg
      721 tgagcaccac cgcagccaga gctaacgcgc cgatgcgcca gtgctggcga gactgttcca
      781 gaatctggcg gtaggctcga ggatgggcca tccggattca atagtatgga taagtcgtga
      841 acgggccact tcgcgcagca catttcgcgg ctcgcgcgga aggcgctcag ccagctcggc
      901 cctccgttcg cgctcgaagg cgcgtccggg ctccaggtag tcggcacaat acaggatccg
      961 ccccaccatg tcccactccg gcaatcccag cgagtgatag cgcaccgcat cgaggacgcc
     1021 tcggtcgtct tcgccttcgg cccgggcccg ggccgcactt gcaggaccat ggcgcagttc
     1081 cgggggtccc tgaatactgc cggcccactc ttccagcacc gcatccggag cgtcgcgcaa
     1141 cgcatcgtgc agccacacgg cacgaagcca gcgattgcgc tccgaatcgg gcactcccaa
     1201 ccgctccgcc cattccagtg cgagcgccgc tactcgttgc acatgctgga gccgttccgg
     1261 agacatgacg gcccacgcgg gaggggtggg ccggagctgg ggtggcgaat gcggcgaggc
     1321 gggcggggtg ctcagctctc ggcccggagt tgtggccgca ccacacggtt tttcgaatcc
     1381 acaaacacca cgcagggcac gtgctcctcc gcttcatcct cggtgtaaag tccataggag
     1441 atgacgatga ccaggtcgcc tgggagaccc tgtcgtgccg cggcaccatt cagctgcaac
     1501 acgcccgagc cccggggccc ggggatgacg taagtggaaa aacgcgcacc gttgttgacg
     1561 ttgaccactt gcacttcctc ataggtcacc aggtcggcgg catcgagcag ctcctggtcg
     1621 acggtgagtg agccttcgta gtgcaactcg gccgaggtga tcgtcgcccg gtgaattttg
     1681 gatttcatca ggtgccgctg catcagccca gtccctctgc aagagtgatg ttgtcgatca
     1741 ggcgggtgcc tcccacgcgc gccgcgatcg ccacgatcgt gcgcccatcc accaccgttc
     1801 ctgggatcag agaagttggt tcgacgatgg caatatactc gaccgcgact cccgaatttt
     1861 cctcgagtgc cgtccgcatt ctctgttcca gggcaacagc tttgcgttcg ccttggcaaa
     1921 aggcctgatg ggcgaccccc agggcccggc tgagcatcag agcggactgg cgatcgggtc
     1981 cctggagata ggcgtttctg ctgctgagag ctaacccatc gggctcccga accgtggcaa
     2041 cgtccacgat ctcgattcgc caatccagat cgcgcaccat gcgcttgatc aaggtgagct
     2101 gctggatgtc cttgcgaccg aagcacgcca ggtcgggctc gaccaggtga aagagttttg
     2161 ccactacggt caggaccccg gtgaagtgac ccggtcgagc ggcgccctcc catcgctccg
     2221 caattgggcc cggcacgacc cgaacttccg atcccgccgg gtacatcgtc tccgccgttg
     2281 gtacgaacaa cgcatctact ccccgagaag ctgccagggc acggtcgcgc ggcaggtccc
     2341 gcgggtagcg gtcgagatcc tcggccggac cgaactgaag tgggttgacg aagatgctga
     2401 gcgcgaccgc gtccgcgcgc cggcgggcct cgtccacgag ggccagatgc ccctcgtgga
     2461 gatagcccat cgtcggcacc agggcgacgc gccgacc
//
LOCUS       DASRPQ010002144         1193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3720817, whole genome shotgun sequence.
ACCESSION   DASRPQ010002144 DASRPQ010000000
VERSION     DASRPQ010002144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3720817"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..422
                     /locus_tag="VFD73_24295"
     CDS             <1..422
                     /locus_tag="VFD73_24295"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZI77097.1"
                     /translation="ALVRSTADAASAYIRGDIRRYLTLIKHGDDYTLMAPYGGEPRHG
                     FNAEEALESTPKMFRGGEADLELVETYTSGDMAVLVAIERQHGEVGGMPDQDWSLRVT
                     LVFRHEESEWRLVHRHADPLVHAISMERMAALARGQS"
BASE COUNT          215 a          339 c          405 g          234 t
ORIGIN      
        1 ctgcgctcgt ccgaagcact gcggatgctg cctctgcata tatccgagga gatattcgca
       61 gatatctcac gctgatcaag catggagacg actacacgct catggctcct tacggcggag
      121 aaccaaggca tggcttcaac gcggaggagg cattggaatc cacgccgaag atgttccggg
      181 gcggtgaggc ggatctcgag ctcgtggaga catatacctc gggcgatatg gcggtactcg
      241 tggccatcga acggcagcac ggcgaggtcg gcggaatgcc ggaccaggac tggtcgctgc
      301 gcgtgacctt agtctttcgg catgaagagt cggaatggcg gttggtgcat cgtcatgccg
      361 acccactggt tcacgctata agcatggagc gcatggcagc cctcgcccgt ggccagagtt
      421 gacgacagca tttcttcccg tcatgcccaa tacgtgccga aaccacggct ccgttttgac
      481 attcctgcag gctacgagct tccggccgga ggtctgtgaa acgcccctcc ggtgagccac
      541 aacgatcagc agaggtaagc gtcttgggcc gtcagtaggg gagcgaccag tgcgcagacg
      601 tggtgtggtg ggtttgcaga tggccgggaa agtgagattc cggtcagcgc cctgacgctg
      661 gcggcccttg gggcccttgg cgggccgtta gccctggtgt cgcagggtcg atgacggtca
      721 ctaccggtat gtcggctgcc cgggtcagcg cggtcagagg ccccgatcga tcggattccc
      781 aagctggtgg tgcgggttcg attcccgtca cccgctccga tgtgaagacc caggtcagag
      841 gcaatgttct ctcgcctggg tcatggtcgt tccggggtgt tgcgggcctt catgctacta
      901 gcgtgcctga cttgagccga tcgcgctcgt gatggccagg tcagtccctc atgcctcgtg
      961 ccggtacata atcgcggcgc gcagatgtag atgccggaga cgatgagcac gctggatgcg
     1021 tgcgggccgg cacggctgtt ggctaaggcc gccacgcagg cgcggcgcgc caggaccggc
     1081 ggttcggtcg tcaaccttgg gcctttgacc taacttactg gtgaaagtct gggacctgag
     1141 aggagcctga tggccttgct ggacaaccgc gcgacatcgg agacgggtga gga
//
LOCUS       DASRPQ010002145         2535 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4012221, whole genome shotgun sequence.
ACCESSION   DASRPQ010002145 DASRPQ010000000
VERSION     DASRPQ010002145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2535
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4012221"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            488..997
                     /locus_tag="VFD73_24300"
     CDS             488..997
                     /locus_tag="VFD73_24300"
                     /inference="COORDINATES: protein motif:HMM:NF016167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF433 domain-containing protein"
                     /protein_id="HZI77098.1"
                     /translation="MIMTGQALTQAQPHRRLVAFRDRLRRSAGSWVWAGAAGRGQGWQ
                     QPPVLVSGQRGAEALAVDASHLYWTAIGEGVIYEANLDGTNPQAIVSGQSGPWGVTVD
                     ASQLYWTNPVPLLAVISRTTAAFPSVKHSGVVTAGWLEMISTDTQVMHGQAVIAGTRV
                     PVSAIPQSR"
     gene            1281..2431
                     /locus_tag="VFD73_24305"
                     /pseudo
     CDS             1281..2431
                     /locus_tag="VFD73_24305"
                     /inference="COORDINATES: protein motif:HMM:NF012551.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="endo-1,4-beta-xylanase"
BASE COUNT          474 a          826 c          800 g          435 t
ORIGIN      
        1 ttcgagacca gcatcccggg cgtgttcgcg gtcggcgatg tccactccgg ctcgatgaag
       61 cgcgtcgccg cggccaccgg cgagggcgcc agcgcgatcg cctcagtgca caaagccatc
      121 agtacgctca tctagcgtca aacgcgccac caggcctgtg acatattgat ccagccgtct
      181 gccgcgcgag caggatcagc gtcctgccgc cttttgcgag ccttcagcgc ggtcacgcat
      241 agctcggtca ggtccggtgc catgcgcacg gcgactcgtc ggccgggtgc cgcgctcggc
      301 gttccacggc gacgcatcca gaaatgtcct gtccagccga gggttgcgat tgtcagactc
      361 aggtcacgag tgatcttgcg aggtccggat ttaggttgcg ggtcgctacc ggggtttggc
      421 tgtccggcgt gaacatgctc ggtgcagtca atggctgctg gacagacccg ggggcccgga
      481 gagtttcatg atcatgacag gtcaggcgct aacccaggcg cagcctcacc ggaggctggt
      541 ggcgttccgg gatcggctgc gcaggtcagc tggcagctgg gtatgggccg gagcggcagg
      601 gaggggacaa ggatggcagc agcccccggt cctcgtctcc ggccagcgcg gcgcggaggc
      661 actggcggtc gacgccagcc acctctactg gaccgccatc ggtgagggcg tgatctatga
      721 ggccaacctg gacggtacca acccccaggc catcgttagc ggccagagcg gcccgtgggg
      781 ggtgacggtc gatgccagcc agctgtattg gaccaacccc gtcccgctcc tcgcagtcat
      841 cagtcggacg actgccgcct tcccctccgt caagcactct ggagtcgtga ccgctggctg
      901 gctggagatg atctctaccg acacccaggt gatgcacggt caggccgtga tcgccggaac
      961 ccgcgtgccg gttagcgcga taccccagtc gcggtagtca cggcggcaat atcgccacgg
     1021 tcgccgcacc ggcacaagcg cctatctccg ccagcccatc tacgtgatct tcgaggggca
     1081 ccattcatgc tgcgggtcga aactatcgga tgcgatccga cccagactct gggaacacaa
     1141 gactccacaa ataacactgc ctggtgtgcg gaactgttga catgaggttt ccggcgcctt
     1201 aactttgccc catcccgata attgcgcccg aaactttcga atgaagcgaa agtgacttgg
     1261 tggcgcggag gaggcaatac atgaggatcc gtcgtcttct cgcggtgggt gcagccgggg
     1321 tggctgcggc actcggcatt accaccgcag ctagtgcact taccggctcg ggcaatgcag
     1381 ccgccccgga ctccctgcgg gcgctggctg cgaaaaccgg cctccgcatc ggtacggcag
     1441 tcattccttt tgacctcgat caccccgcct accaggccat cgttgcgggc cagttctcgg
     1501 tcgtcactcc gggaaacgag atgaagtggc aggtcgtgga gccgacccaa ggaacgtttg
     1561 actggtcggg tgctgatcgc cttgtcacct tcgccgagca gcacggccag ctggtccggg
     1621 gacacacgct gctgtggcac aaccagctgc ccgactggct gacttcgggc gtcgccaacg
     1681 gaactatcga caacgcccag ctcaaagacc tgctgcatca gcacatcgtc accgaggtat
     1741 cgcgctacaa aggcaggatc tggcagtggg acgtggccaa tgagttcttc accgacagca
     1801 atccctcgac gatcaacccg aatgacttct ggatctctca cctcgggaca ggcatcgtcg
     1861 cggacgcctt ccgctgggcc caccaggcag atccgcacgc gctgctcttc tacaacgact
     1921 acaacatcgc cggcgaggac ggcacgaacg ccaagagcga cgcggtgttc gcatggctca
     1981 agcagatgct cgcccagggc gtgccgatca cggagtcgga gaccaggggc acctcgatac
     2041 gcagtacggg ttcagcggca cgcagatgac ccaggacctg cagcggtacg ccggccttgg
     2101 cctgaaggtg gccatcaccg aggccgacgt ccgcacgttc gtgaacaacg cgaccgacca
     2161 ggtgcccacc gaccacctgg ccacgttcgc gcagccgtat gagttcgggc agatgctgaa
     2221 ggcgtgtctc gcggtacgcc agtgcatatc gttcaccgtc tggggcttcg gggacgcgga
     2281 ctcctgggtg cccggcttct tcaccggcga gggatacgcc acgatctatg acgtgaacct
     2341 caaccccaag ccggcctaca ccgaactcca gcaggatctc cggctcgctt ccggtgcccc
     2401 gcaccgggtg ccgagcggag cgggcctgta acgacgatcc gaaggacatg aaacccggat
     2461 tcgagtgcgt ctgaacgcgc tcgaagtccg ggttcatgat ccagacgatg tcgaagagct
     2521 ggagcgagcc gatga
//
LOCUS       DASRPQ010002146         2855 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3420824, whole genome shotgun sequence.
ACCESSION   DASRPQ010002146 DASRPQ010000000
VERSION     DASRPQ010002146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2855
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3420824"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..185
                     /locus_tag="VFD73_24310"
     CDS             <1..185
                     /locus_tag="VFD73_24310"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HZI77099.1"
                     /translation="WLLHRESPTKVGTYAYVNPVVAVLLGYFVGGEPLGARTILGTLC
                     VLISVVVITMTGRPGS"
     gene            complement(190..1989)
                     /locus_tag="VFD73_24315"
     CDS             complement(190..1989)
                     /locus_tag="VFD73_24315"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HZI77100.1"
                     /translation="MPDYRSAAAVIFALLTGCARSANEGASASAVASPQASHSAGATE
                     AARRVDAIADDYWAAWVQTFPLGALFSGVPNAPNDRLGDNSIAATQAWEKREDRWLEQ
                     MHQVKPADLKGTPEDATYGVLLETLEAAVQGRVCRSELLPLNQQSGWQIGLPIIAQLQ
                     PLGTPALRTAALARWHDVPRFIDTEIADLQAGLREGYTQPRGNAQAVVDQLSELLNMP
                     PERSPFAALADRDSAPGFRDSVLAIVSREIVPAAGRYRDFLVSQYIPKARTSTALSTL
                     PHGADCYRARVRGFTTVDRDAHAIQQLGYQQMSAIEAEARPIAQRMFGTTDLPALYEK
                     LRTDTAFTFRSRDDLIHTAESAVDRAKAAMPKWFGRLPRGSVIVDPCLKFEEKSGCPN
                     SYVPGTPDGKRPGRWRINASDDPPQPRAPLEGTAFHETIPGHHLQIAIAQEREDAHPI
                     TRYFFFSGFGEGWALYAERLAGEMGLYSSDLYRFGDLGEQALRAARLVVDPGLAVLGW
                     SREQAIDYMVTHVPEARNASISEVDRYIANPGQATAYMIGRLEIERLRSEAKSRLGNR
                     FDIREFHDKVLESGGVPLAFLRRHIEEWLDGKR"
     gene            2008..2145
                     /locus_tag="VFD73_24320"
     CDS             2008..2145
                     /locus_tag="VFD73_24320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77101.1"
                     /translation="MQWVVLLMYFYGRDGKEVSYDSLRGRESRAVLRNRHATAPLAVT
                     L"
     gene            complement(2148..>2855)
                     /locus_tag="VFD73_24325"
     CDS             complement(2148..>2855)
                     /locus_tag="VFD73_24325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77102.1"
                     /translation="YPGGTGIRLKYSADYGSSNPQFTWVNWTVPEVGYASFVQYGQAY
                     AGGSPDYVYSIIPMHSGTQGDVSNSAYDLVPAFTLMRGLRRALGTRSSWQFFCGTSSA
                     PAWCGTAAEARSVINRPVKGFTPRAGMDWNPGLQKFMLTLVYDPSPATTTDSPRFNGG
                     LMVFVSSHAWGPWTLIFNSQGTWPGGTSSTACGSTKWGAGERAEIPSKYMSANGRTFY
                     LFSSGGDCLSIARGVLP"
BASE COUNT          500 a          870 c          944 g          541 t
ORIGIN      
        1 tgtggctgct ccaccgggag tcgccgacga aagtgggaac atacgcgtac gtaaatccgg
       61 ttgtggcagt gctcctgggc tatttcgtcg gcggcgagcc gctcggcgcc aggaccatcc
      121 tgggaacgct ctgcgtcttg atcagtgtgg tggtgattac catgacggga agacctggga
      181 gctgactgct caccgcttac cgtcgagcca ctcctcgata tgccgccgca ggaaggcgag
      241 cggcacgccc ccgctttcca gcaccttgtc gtgaaattcc cgaatgtcga agcgatttcc
      301 caaccgggat tttgcttcac tcctgagacg ctcgatctcc aggcggccga tcatgtaggc
      361 ggtggcctgt cccggattgg cgatgtaccg gtcgacttcg gagatcgagg cattccgtgc
      421 ctcgggcacg tgggtcacca tgtagtcgat ggcctgctcc cggctccagc cgagaacagc
      481 gagacccggg tcaaccacca ggcgcgcagc gcggagtgcc tgctcaccca gatcgccgaa
      541 ccggtagagg tcgctcgagt agagtcccat ctcgccggcg agtcgctcgg catacagcgc
      601 ccagccttcc ccgaagccgg aaaagaagaa ataccgagtg atgggatggg catcttcccg
      661 ctcctgcgcg atcgcgatct gcaggtgatg tcccgggatg gtctcatgga acgcggtgcc
      721 ttcgagcggg gcgcggggct ggggtggatc gtcggaggcg ttgatccgcc agcggcctgg
      781 acgcttccca tccggcgttc ccggtacgta cgagttgggg cagccgctct tctcctcgaa
      841 tttgagacat ggatctacga tgacactgcc tctcggcagg cggccgaacc atttgggcat
      901 cgctgccttg gcccggtcca ccgcactctc ggcggtgtga atcaggtcgt cgcggctgcg
      961 gaaggtgaac gcggtatcgg tgcggagctt ctcatagagt gccggcaagt cggtggtgcc
     1021 gaacatccgc tgggcaatgg gacgggcttc ggcttcgatg gccgacatct gctggtagcc
     1081 gagctgctgg atggcgtgcg cgtcccgatc gacggtcgtg aagccgcgga cccgggcgcg
     1141 ataacagtcg gccccgtgcg gcagcgtcga cagcgcggtg ctggtccgcg ccttggggat
     1201 gtactgagag accagaaagt cccggtatct gccggctgcc ggtacgatct cacgagaaac
     1261 gatcgccagc acggaatcac ggaacccggg agccgagtcg cggtcggcaa gggccgcgaa
     1321 gggcgagcgt tccgggggca tgttgagcag ctcgctcagc tgatcgacca ctgcctgcgc
     1381 gtttcctctc ggctgggtgt aaccctcacg gagtcccgct tgcagatccg cgatctcggt
     1441 atcgatgaaa cggggtacgt cgtgccatcg ggcgagtgcg gcggtacgca gggcaggagt
     1501 gcctagtggt tgcagctggg cgatgattgg gagtccgatc tgccagccgc tttgttgatt
     1561 cagcgggagc agctctgatc tacacactcg gccctgaacc gcggcctcga gagtctccag
     1621 cagaaccccg taggtagcgt cctctggtgt gcccttcagg tcggcaggct tcacctgatg
     1681 catctgttcc agccagcgat cctcccgttt ttcccaggct tgggtcgcgg caatcgagtt
     1741 atcgcccagc cggtcgttgg gcgcattggg aacgccggag aacagggcgc cgagcgggaa
     1801 ggtttggacc caggcagccc agtagtcgtc cgctatggca tcgacccgcc tggccgcttc
     1861 ggttgcgccc gccgaatggc tggcttgcgg ggaagccacg gcactggctg aagcaccctc
     1921 gttcgcactg cgcgcgcatc cggtgaggag ggcaaagatg acggccgcag ccgagcgata
     1981 gtctggcatg gggaactcga ggtcgaagtg caatgggtgg tgctgctcat gtatttctac
     2041 gggcgagatg ggaaagaagt gtcgtacgat tccttgcgag gccgcgaatc acgcgcggtg
     2101 ctgcggaatc gccacgcgac tgcgccgctc gcggtgactc tgtaacccta cggcaacact
     2161 cccctcgcaa tcgacaggca gtctccgccc gagctgaaca gatagaacgt ccttccgttg
     2221 gcactcatgt acttgctcgg gatctcggcg cgttccccgg ctccccattt ggtgctgccg
     2281 caggcggtgc tgctcgtgcc accgggccag gtgccttggc tgttgaagat cagggtccac
     2341 ggcccccacg catgcgacga gacgaacacc atgagccctc cgttgaagcg ggggctatca
     2401 gtcgtcgtag ccggcgacgg atcgtacacc agtgtcaaca tgaatttctg cagccctgga
     2461 ttccagtcca tgccggcccg cggagtgaat cctttgaccg ggcgattgat gacgcttctt
     2521 gcctcagccg cggtgccgca ccaggcgggc gccgaactgg tgccgcagaa gaactgccag
     2581 ctgcttcggg tgcccaaggc acgccggaga cctcgcatca gggtaaatgc cggcaccaag
     2641 tcgtacgcgc tgttactcac gtcgccttgg gtcccggagt gcatcggaat gatcgagtat
     2701 acgtagtcgg gggaaccgcc ggcgtacgcc tgaccgtatt gtacaaagga ggcgtagcct
     2761 acctctggaa cagtccagtt cacccaggtg aattgaggat tggaggagcc gtaatcggcg
     2821 gaatacttga gccgtatccc ggtcccgccg ggata
//
LOCUS       DASRPQ010002147         1644 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4316595, whole genome shotgun sequence.
ACCESSION   DASRPQ010002147 DASRPQ010000000
VERSION     DASRPQ010002147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4316595"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..305)
                     /locus_tag="VFD73_24330"
     CDS             complement(75..305)
                     /locus_tag="VFD73_24330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77103.1"
                     /translation="MGIPHLRFNSIGHCSRVGSDMMKHVAPLGWEHLSLTGDCAWDTT
                     DLPGPGELRLLRNKPSLLAARLAFVSVLICRT"
     gene            complement(342..944)
                     /locus_tag="VFD73_24335"
     CDS             complement(342..944)
                     /locus_tag="VFD73_24335"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI77104.1"
                     /translation="MPPAGSVVVCLDEMGPQAARSFPGQQLVKPAAPEAERAKQEIDY
                     GRRGSGYVFGAFQPASGAALTHPYDRRTTTIWVDFLNEVETWIDPAVERIYAITDNLS
                     THSAPDVLLFSLLHPRWEFVFQPKYAAYLNLIEPWWKVLRSLALKGRRFETWAEIEQA
                     VERATAYWNDHKHPFIWGRRRRHRPSRRPGVAALPAISLI"
     gene            complement(923..1456)
                     /locus_tag="VFD73_24340"
     CDS             complement(923..1456)
                     /locus_tag="VFD73_24340"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI77105.1"
                     /translation="MTLRLRDLTDDERTEVQRITRSHTLGAAFVRRAQIVVHAMSGLK
                     AEEIAHRMDLCGNTVRYWINRFNARGLDGLEEDVRTGRPPTYSAEQRSAVITAALTRP
                     TELGLPFACWTLDRLVAYLSGQGIAMRRSRISEIFIREGLKWRHEETWFGERVDPDFA
                     KKRGSSNSSTRCRRRAA"
BASE COUNT          330 a          482 c          528 g          304 t
ORIGIN      
        1 atgggattga tagctctgag cacgagccgc atcatgagaa aacactagtg ggggtcactg
       61 caagaaagtg accgctatgt acggcagatc agaacagata cgaacgcgag tcgcgccgcc
      121 agcagcgacg gcttgttcct cagcagccgc agctcacccg gtccgggcag gtcggtcgtg
      181 tcccaggcgc agtcgccagt gagcgacaga tgctcccacc cgagcggcgc gacgtgcttc
      241 atcatgtcgg acccgaccct agagcagtgc ccgatcgagt tgaatcgcag gtgggggatt
      301 cccaagcgga aatttatgag ggagtctaag tggtgcatcc gctaaatcaa tgagatagct
      361 gggagagcag cgacaccggg acggcgggat ggccgatggc gtcgacggcg tccccagatg
      421 aaaggatgct tatggtcgtt ccagtaggcg gtggcgcgtt caaccgcctg ctcgatctcg
      481 gcccaggtct cgaaccggcg acctttcaga gccagggagc ggagcacctt ccaccatggc
      541 tcgatcaggt tgaggtaggc cgcgtacttg ggttggaaga cgaactccca gcggggatga
      601 agcaggctga acagcagcac gtccggcgcg ctgtgagtgc tgaggttgtc agttatcgca
      661 tagatccgct cgactgcggg atcaatccag gtttcaacct cgttcaggaa gtcgacccag
      721 atggttgtag ttcgacgatc ataagggtga gtaagagccg cgccgctggc cggctggaag
      781 gccccgaaaa cgtagccgct gccccgtcgg ccgtaatcga tctcctgttt ggcacgttca
      841 gcctcgggcg cagctggttt cacgagttgc tggcctggaa agctcctcgc cgcttgtggt
      901 cccatctcgt ccaggcagac cactacgctg cccgccggcg gcaccgtgta gagctgttcg
      961 atgatcccct ttttttggcg aagtcgggat cgacccgctc accaaaccag gtttcctcat
     1021 gacgccattt cagaccttcg cggatgaaga tctcactgat ccggctgcgc cgcatcgcga
     1081 tgccctggcc ggagagatag gcgaccagcc gatccagggt ccagcaggca aagggcaagc
     1141 ccaactcggt gggccgggtc agggccgcag tgatgacggc gctgcgctgc tcggccgaat
     1201 aggtcggggg tcgtccggtg cgcacgtcct cttccagccc gtccagaccg cgggcgttga
     1261 agcgattgat ccagtaacga acggtgttgc cgcacagatc catccggtgg gcgatctcct
     1321 ctgccttcag gccgctcatg gcatgaacga caatctgggc gcggcggaca aaggcagccc
     1381 caagcgtgtg ggagcgcgtg atccgctgaa cttccgtccg ctcatcatcc gtcaggtccc
     1441 gcaaccgaag cgtcatggcc ctgctcccaa gcagatcggc atgatccttc aacagcccgc
     1501 gagcatgaca atcttaggct atttgccgga tgcaccacta agaggcggtt gtcataaatc
     1561 ggcgagtctg ttggcgatga cgaagatgca ggcggtggtg agcagggact gaatgatgcc
     1621 ggcggagcgg tcgtggcggc gatc
//
LOCUS       DASRPQ010002148         1063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4316616, whole genome shotgun sequence.
ACCESSION   DASRPQ010002148 DASRPQ010000000
VERSION     DASRPQ010002148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4316616"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..607)
                     /locus_tag="VFD73_24345"
     CDS             complement(<1..607)
                     /locus_tag="VFD73_24345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77106.1"
                     /translation="MSILSLIWGVCLALAVNEWCELSPWAAQKIARWSAHLRYADSER
                     AEVRAEELAAVIDGRPGKLFKLITAMCFAAAAIRMWAVRAVIRAWAAHTTADGSLVSI
                     TPAGQVTLRKAIAASMLTAITAFTVLQVTSAGTPATSADAFAISLRSPSGSSATGEAT
                     AHRTADGLWSIQLMVQGLKNLGPDAFYEGWYVPASQPGHPDL"
     gene            complement(604..972)
                     /locus_tag="VFD73_24350"
     CDS             complement(604..972)
                     /locus_tag="VFD73_24350"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HZI77107.1"
                     /translation="MARSSRTTGPLLDVAACLLRGHAQGEKLHGWAIMKATKRSGPTV
                     YGVLDRLEDRNWITGYWEDQDPGSSKPRRRFYRLTPEGLTGICDLLAERRPEALVEPK
                     RRVPGLSFPGRRSVAPGGAG"
BASE COUNT          197 a          343 c          344 g          179 t
ORIGIN      
        1 tgaggtccgg gtgaccgggc tggctggccg ggacgtacca cccttcgtag aaggcgtcgg
       61 ggccgagatt tttcagtcct tgcaccatca gctggataga ccacaagccg tctgcagtgc
      121 gatgcgcggt tgcttccccc gtagcgctgc tcccggatgg cgaacgcaga gagatggcga
      181 acgcgtccgc ggacgtagct ggcgtgcctg cggacgtgac ttgcagcacc gtgaaggcgg
      241 tgatcgcagt cagcatcgat gccgctatcg ctttcctgag cgttacctgg ccagctgggg
      301 tgatgctcac gagagagccg tccgcggtcg tgtgggcggc ccaggcgcgg atgacggcgc
      361 gtacggccca catgcggatg gctgcggcgg caaagcacat ggcggtgatg agcttgaata
      421 gctttcccgg gcgcccatcg atgacagcgg ctagctcttc ggcgcgaacc tcggcgcgtt
      481 cagagtccgc atagcgaaga tgcgccgacc agcgagcgat cttttgtgcg gcccacgggg
      541 aaagctcgca ccactcattg acagcaagcg ccaagcaaac gccccagatc aggcttaaga
      601 tgctcatccg gcaccccccg gtgcaacgga ccggcgacca ggaaacgaga gacccggcac
      661 ccgccgtttc ggctcgacga gcgcctcggg acggcgctcg gccagcaagt cgcatatccc
      721 ggtcaggccc tcgggagtaa gccggtaaaa acggcggcgc ggcttgctgg accccgggtc
      781 ctgatcttcc cagtagccag tgatccagtt tcggtcctcc aaccggtcaa ggacgccgta
      841 cacggtcggg cctgagcgct tcgtagcctt catgatcgcc cagccgtgca gcttctcgcc
      901 ctgcgcgtgc cccctcagca ggcaggctgc gacgtcgagc agtggacccg tagtgcggga
      961 agaccgcgcc atatgcttat attacctaga tcgaacagga actcaagggg ctcgacgatg
     1021 accctggacc tcggacttcc catccgaaga tacccgtccc ggg
//
LOCUS       DASRPQ010002149         1245 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_257758, whole genome shotgun sequence.
ACCESSION   DASRPQ010002149 DASRPQ010000000
VERSION     DASRPQ010002149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_257758"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..185
                     /locus_tag="VFD73_24355"
     CDS             <1..185
                     /locus_tag="VFD73_24355"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HZI77108.1"
                     /translation="TSWPSIRTDLRNAGAGVVDEAAVVDRNMVTSRGPQDIPVFNREM
                     VALFANGTQTSRQSAA"
     gene            323..589
                     /locus_tag="VFD73_24360"
     CDS             323..589
                     /locus_tag="VFD73_24360"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HZI77109.1"
                     /translation="MQFWQAALLRGYDVTVPGRSGAARGRRMTSWSSIRTDLRNAGAE
                     VVDEAALVDRNMVTSRCPQDIPVFNREMVALFANGAQTSRQSAA"
     gene            936..>1245
                     /locus_tag="VFD73_24365"
     CDS             936..>1245
                     /locus_tag="VFD73_24365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77110.1"
                     /translation="MMGRLEQGLGILLVLIILLDIFLTVLYARIGTSIIGSRVGQLIW
                     ASFVKASKVFGSRQGAVLSFCGPVILVLLVGVWALGLTLGAALIMHPELGTSIRATNG
                     E"
BASE COUNT          214 a          394 c          390 g          247 t
ORIGIN      
        1 tcacctcgtg gccgtcgatc cgcaccgatc tgcgcaacgc cggcgccgga gtagtcgatg
       61 aggccgccgt tgtcgatcgc aacatggtca ccagccgcgg tccgcaggac atccccgtct
      121 tcaaccgcga aatggtcgcg ctgttcgcca atggaacgca gactagtcgg caaagcgcgg
      181 cttgagcgtg gcgcggtagc ctgtcacggc tgtccttgga cttgatccaa ggattgccct
      241 cggccatcgt tcagcaattg tcatcgccgg gcttatcccg ccatcaactg aggtaggccg
      301 cctcagctgc taacgcaggg ccttgcagtt ctggcaggca gctctcctac ggggatacga
      361 cgtcacggtc cctggtcgat cgggggcggc gcgtggccga cgcatgacct cgtggtcgtc
      421 gatccgcacc gatctgcgca acgccggcgc cgaggtagtc gatgaggccg cccttgtcga
      481 tcgcaacatg gtcaccagcc gctgtccgca ggacatcccc gtcttcaacc gcgaaatggt
      541 cgcgctgttc gccaatggag cgcagactag ccggcaaagc gcggcttgag cgtggcgcgg
      601 tagcctgtca cggctgtcct tggacttgat ccaaggattg cccccggcca tcgttcagca
      661 attgtcatcg ccgggcttat cccgccatca actgaggtgg gccgcctcag ctggtaacgc
      721 agggccttgc agttctggca ggcagctctc ctacaaggat acgactggct tcccgcaggg
      781 tgtccgggcg gagcgaggcg gagcgaggcg cagccaagga ctttcagatg cctccggaca
      841 tgcgggccgc accagccctc gcagcggtgt ccgatcgtgc aggtccggca gacccatgac
      901 ccctgacgga gcagttggga tgaaaggagg ctgccatgat ggggcgactg gagcagggcc
      961 ttggaatact gctggtcctg atcatcttgc tcgatatctt tctgaccgta ctctacgctc
     1021 ggatcggcac cagtatcatc ggatccagag tcgggcagct aatctgggcc tccttcgtca
     1081 aagcctcaaa ggtttttggc tctagacaag gagccgttct gtccttctgc ggtccggtta
     1141 tcctcgtgct gctggttggg gtctgggctc tcgggctgac gcttggggca gccttgatca
     1201 tgcacccgga actcggcacg tccatccgcg ccactaacgg cgaga
//
LOCUS       DASRPQ010002150         1053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_257859, whole genome shotgun sequence.
ACCESSION   DASRPQ010002150 DASRPQ010000000
VERSION     DASRPQ010002150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_257859"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1053
                     /locus_tag="VFD73_24370"
     CDS             <1..>1053
                     /locus_tag="VFD73_24370"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI77111.1"
                     /translation="AAGITLGGVAGIWLGGRLEVGYGWRDALIAVSLPGFVLAFLTAR
                     LRDPGREVPPVRLQASLRELHVGVTALLRQFVPLLASVAIGSVAAIYFDQLYGADSKV
                     DVAAFGAIITVGLALNIRLWVKRFARAPASGPSTLVRAFGEQAVSLAVVMRTPTLAFI
                     FVGGALISFGMNGLVGWAPTFMSRALGLTVPEAATLLGSWGLVAGILGALFGGVVADW
                     LRRYTASGRVLTICLGLLIGGPLAIWLLTVRDLDLFVPVFAAAFFFLSWFNGPIAAVI
                     FDVVPAKISATVAGAYLLFIHLVGDTVAFPLVGALSDRFGIDQAVLVLPSVAVLGGLV
                     ILGATRTVGRDMERAG"
BASE COUNT          128 a          321 c          372 g          232 t
ORIGIN      
        1 tggccgcagg catcactctc ggtggagtag cgggcatctg gctgggcggc cggctcgaag
       61 tgggctacgg ctggcgcgac gcgttgatcg cggtgagcct cccgggtttc gtgctggcgt
      121 tcctcaccgc acgccttcgc gaccccggac gggaagtgcc gccggttcgc ctccaagcct
      181 cgctccgtga gctgcacgtg ggagtgaccg ccctgctgcg gcagtttgtt ccgctgctcg
      241 cgagtgtcgc gatcgggagc gtggcggcca tctacttcga ccagctgtac ggcgccgact
      301 cgaaggtgga tgtggctgcg ttcggggcca tcatcacggt agggctggca ctcaacatcc
      361 gactctgggt caaacgcttc gcccgggctc ctgcgtccgg gcccagtacc ctggtccgcg
      421 ccttcggcga acaggccgtc tcactcgcag tggtgatgcg gactccaacc ctggcgttca
      481 tcttcgtggg cggagcgctg atctctttcg ggatgaatgg attggtagga tgggcgccca
      541 cgttcatgtc ccgcgcgctg gggctcacgg tgcctgaggc agccactctg ttgggaagct
      601 ggggactggt cgccggtatt ctcggcgcgc tgttcggggg cgtggtagcc gactggctac
      661 ggcgctatac cgccagcggg cgggtgctga cgatctgtct cggtcttctc atcggcgggc
      721 cgctcgccat ttggcttctc accgtgcgcg acctcgatct ctttgtgccg gtgttcgcgg
      781 ccgccttctt tttcctctcg tggttcaacg gtccaatcgc ggccgtcatc ttcgatgtcg
      841 tgccggccaa gatcagtgca acggtggccg gagcgtatct gttgttcatt cacctggtgg
      901 gagacaccgt tgcctttccg ctggttggtg cgctgtccga tcgattcggc atcgaccagg
      961 cggtgctggt gctgccctcg gtggcggtgc tgggagggtt ggtcatcctg ggagcaacgc
     1021 ggacagtggg gcgggatatg gaaagggcgg gcg
//
LOCUS       DASRPQ010002151         1227 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4012878, whole genome shotgun sequence.
ACCESSION   DASRPQ010002151 DASRPQ010000000
VERSION     DASRPQ010002151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4012878"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(8..463)
                     /locus_tag="VFD73_24375"
     CDS             complement(8..463)
                     /locus_tag="VFD73_24375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77112.1"
                     /translation="MAVFFGILLGDYLTGPFIHSAVLFYLIPIGMAAWGGALGWSLAL
                     AFVWPPLRLGIVALWGTPWPWRLTLEDMVVNLVVSVLFASLVWHLVKQERKLRVLEGM
                     LPVCGFCKRIRNGAEWQEMERYITEHSEAEFSHTFCPECGQRHYGAYLS"
     gene            complement(662..934)
                     /locus_tag="VFD73_24380"
     CDS             complement(662..934)
                     /locus_tag="VFD73_24380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77113.1"
                     /translation="MATELLVIARPAVAQRRREPFVAGRFRGIHRHWLEETRDWLAPA
                     IAPDASFVRGVLAMFGPSDGFALATATTRVERGRRTLAQSGVARGW"
BASE COUNT          258 a          379 c          372 g          218 t
ORIGIN      
        1 gtaaccgtca gctcagatat gcaccgtaat gccgctgacc acactcaggg cagaaggtgt
       61 gggagaattc ggcttcggag tgctcggtga tgtagcgctc catttcctgc cactccgctc
      121 cattacgaat ccgcttacaa aacccgcaga ccggtagcat cccctcgaga acgcggagct
      181 tgcgttcctg cttgaccaga tgccagacca ggctggcaaa caggaccgag acgaccaggt
      241 tgacgaccat gtcctcgagg gtcagccgcc agggccaggg ggtgccccag agcgctacta
      301 tccccagccg caacggaggc cagacgaagg ccagagccag actccacccc aacgccccac
      361 cccatgccgc catcccgatg ggtatcagat agaagaggac ggctgaatgg atgaacgggc
      421 cggtgagata atcccccagc agaatgccaa aaaaaaccgc catccattgc catggccgca
      481 aagtggttgt ggagcgcagc gagaaagccc gaccgttttc gacccgagtg gaagcgcgaa
      541 ggcgcgccct catgcgggat ttccgggggt tcagactctt ctcagcggcc tgcggccggc
      601 tggggctcct tgaaccatgc tcccagcgcc tcgaggaagc gttggcacgc cgccacgacc
      661 ttcaccatcc cctggcaacg cctgactggg ccagagtgcg gcggcccctc tcgaccctgg
      721 ttgtggccgt cgccaatgcg aacccgtctg acggaccgaa catcgcaagt acccctctga
      781 cgaagctggc gtcaggtgcg atcgcgggag cgagccagtc gcgggtctcc tcgagccagt
      841 gccggtgtat cccgcggaac cggccagcca cgaatggttc ccggcgcctc tgggccacgg
      901 caggtcgggc gatcaccaga agttcagtag ccatggggac tcccgttgaa gtggttgccc
      961 caagatggct gctgatctat gaagacagtg tgaagcagga tggaagaagc gttgcgccgg
     1021 cttcggcgtg aaggcgattt aacagagtct tcatgccctc atcatagagc aatagccatc
     1081 ttgtcacgtt gctcaggcca agtgtcttgg ctgagctgat ttcactttgc ctgggagcga
     1141 gcaatgaagg tcgccgatct gatgcagacc gatgtacgcg tggttaccgc tgatatgccg
     1201 gtatccgagg ttatcgtggc gctcgat
//
LOCUS       DASRPQ010002152         1083 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3066734, whole genome shotgun sequence.
ACCESSION   DASRPQ010002152 DASRPQ010000000
VERSION     DASRPQ010002152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3066734"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..376)
                     /locus_tag="VFD73_24385"
     CDS             complement(<1..376)
                     /locus_tag="VFD73_24385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77114.1"
                     /translation="MGLFRKSPPPRPALQRSTPRPWDPPETEFPAIVPIDTLQFDRSE
                     QTAIAITGMSAYSNGFEIFVTRLIRPDAPGLDGDPVPGAPRGMLAERQSFQLSLRLSD
                     GRVVPSGRPPDDAEPGAPILRSR"
     gene            complement(790..>1083)
                     /locus_tag="VFD73_24390"
     CDS             complement(790..>1083)
                     /locus_tag="VFD73_24390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011082855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI77115.1"
                     /translation="HKAPVIQAWLARHPRFRLHFTPTGSSWINQVERWFGFLTDQRIR
                     RGVHKSVQALEADIRDWIKHWNASPRPFAWTRTADEILDSLARYLARISGAAY"
BASE COUNT          181 a          351 c          366 g          185 t
ORIGIN      
        1 cgcgcgatcg caggatcggc gctcccggct cggcatcatc cggtggtctc ccgctcggga
       61 ccacgcggcc atcggagagc cgcagactga gctggaaaga ctgccgttcc gccagcatgc
      121 ccctcggcgc accgggtact gggtctccgt ccaagccagg ggcatctggc cggatgaggc
      181 gagtcacgaa gatctcgaat ccgttgctgt aggccgacat gcccgtgatc gcgatcgcgg
      241 tctgctcgga tcggtcgaac tgcagggtgt cgatcggcac gatggcggga aattccgtct
      301 ccggcgggtc ccatggacga ggcgtggagc gttgcagcgc gggccgcggg ggcggtgact
      361 tacgaaacaa gcccataccg caagccttgc tccggggaat ggtgggcgca actgagcgga
      421 cgatgaacct gacagctgac tatctacctt gacacggtcc ccgatcccat acagcaactg
      481 agatgacatc tatcggtcga ctgagctccc agcggatgat aatcacctcc gggtgcgcgg
      541 cccggaacgc atgcagccgc ggcacctggc cgggctcttc gcgggcgagc cgcagcgcac
      601 gccagctcat cccggcatgg cctccggtca cggccgtcgc tcctcagcgc ggatgccggt
      661 gacctggagc gcctgccgaa tcggtgcggt gcacgagcgc cgccgatgat gcctgctccg
      721 ctcacagaac cctgcccaat ctggctcgcg cggcatgacc tccgcgctct catcgcgcat
      781 aaggagttac tagtatgccg cgcctgaaat tcgtgctaga tatcttgcca gtgagtcgag
      841 gatctcgtcg gcggtcctgg tccaggcaaa tggccgcggg ctggcgttcc agtgcttgat
      901 ccagtcgcgg atgtcggctt cgagggcctg cacgctcttg tgcacgccgc ggcggatcct
      961 ctgatcggtc aggaagccga accaccgctc gacctggttg atccacgacg agccggtggg
     1021 cgtgaagtgc aggcggaacc gggggtggcg ggccagccag gcctggatga ccggggcctt
     1081 gtg
//
LOCUS       DASRPQ010002153         1213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3421353, whole genome shotgun sequence.
ACCESSION   DASRPQ010002153 DASRPQ010000000
VERSION     DASRPQ010002153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3421353"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(907..>1213)
                     /locus_tag="VFD73_24395"
     CDS             complement(907..>1213)
                     /locus_tag="VFD73_24395"
                     /inference="COORDINATES: protein motif:HMM:NF025390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4240 domain-containing protein"
                     /protein_id="HZI77116.1"
                     /translation="REHYLEGRLAALALDGIVAFQAFLDQACDRAFTWGLRGAAMRIF
                     GGWCSDDSFEYFRLWLIGRGRMTFERAITMPDSLAGMALKTIVAATSPWVRILRPSL"
BASE COUNT          232 a          376 c          382 g          223 t
ORIGIN      
        1 gtagttgccg cgctttgctg ctgcacaaag tcaaatgctc aaactcccgc ttgggggcgt
       61 aagctgagag cacctccgga aggagacgat gatgctttgg ctgtactttt tgatcccgtt
      121 cataatcttg ctcggtgccg cggttgtgat caaccggcgt cggcgccgca gcatcagcta
      181 cgacagcgaa tcagcggcac gacttacagg ggcccgggcg aacgacagcg cgcggcattt
      241 cggaggtggc gagagcggcg ggtgaaattt cggccgacgt tgacatgccg gccgcctatc
      301 tttccggcct tcactatcag cttggaaatc ggggccttgc gtcagggatt atcggctcgg
      361 ccccgatcta tgtatccgtc gctggtcatg aggctccgtg aggggctgct tcatcgggca
      421 cgtggcgggc acgaccatct gacctcgacc accctgcctg caggctgcac gatcatgcca
      481 cctgacgcag ggagcagaca atgtccatgg gtgacagccc tgctgaaaga gcaattggca
      541 agcagcactc cgagcggctc atggccaaag ctgacgccga ccggacagca cgcctagcgg
      601 gacacaaatc gctcttccgg tgcctgctcg aacgcctgcg gtcgcacagg cagcaaccga
      661 tcagcgattc ggagccccag ccctcagatc cgtagattcc tgtgtgggca tccggacccg
      721 ttcagatcaa tccgtgacct cggatgcgtt cctgccagct gttcatgctc gtccggagat
      781 cttcctacct gcggtgttta cgaggctgca atgctgcctg cccgggatct gccgggaatc
      841 ctgctatcgg actgctgacc cggggggtgc ccgagcataa gcccaggtca aacaagtctt
      901 ccgaggtcag agcgaagggc gtaggattcg aacccatggt gacgtcgccg ccacaatggt
      961 tttcaaggcc atgccggcga gtgagtcggg catggtgatg gcgcgctcga aggtcatgcg
     1021 gccgcggccg atcagccaga gcctgaagta ctcgaagctg tcgtcggagc accagccgcc
     1081 gaagatccgc atcgcagcgc cccgcaatcc ccaggtgaag gcccggtcgc aggcttggtc
     1141 gaggaaggcc tggaaagcca cgatgccgtc cagcgcgagc gcggccagcc ggccctcaag
     1201 gtagtgctcc cgg
//
LOCUS       DASRPQ010002154         1077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_258355, whole genome shotgun sequence.
ACCESSION   DASRPQ010002154 DASRPQ010000000
VERSION     DASRPQ010002154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258355"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..947)
                     /locus_tag="VFD73_24400"
     CDS             complement(<1..947)
                     /locus_tag="VFD73_24400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018529697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DnaB-like helicase C-terminal domain-containing
                     protein"
                     /protein_id="HZI77117.1"
                     /translation="MQAVLRSLGVLGEKHIPAIYLRSSRSQRRALLAGLLDSDGTVTS
                     TGSAQFSVTSRRLAEDVRELVVSLGYRCGWSLKQVHGASAESSVAYTITFTTTDDVFR
                     LERKRVIHRERRPESTTPRTRQRFITAVRPVESVPVRCVQVESADHMYLASRSMIPTH
                     NSTLALDFARAAAIRNSMSTVLFSLEMGRNEITMRLLSAEARVPLSTMRTGQMNDDDW
                     ARLARRMSEVADAPLFIDDSPNMNLMEIRAKCRRLKQRNDLKFVIIDYLQLMSSPKRV
                     ENRQQEVSEMSRSLKLLAKELDVPVVALSQLNRGPEQRT"
BASE COUNT          182 a          347 c          350 g          198 t
ORIGIN      
        1 tcggtgcgct gctcggggcc gcggttgagc tgggacagcg cgacaacggg gacatcgagt
       61 tccttggcca gcagcttgag cgaccgggac atctcggaaa cttcctgctg ccggttctcc
      121 acccgcttgg gcgaggacat cagctgcagg tagtcgatga tgacgaactt caggtcgttc
      181 cgctgcttca gccgccggca cttggcccgg atctccatca ggttcatgtt cggcgagtcg
      241 tcgatgaaca gcggcgcgtc tgcgacctcg ctcatccgcc gggctagccg ggcccagtcg
      301 tcgtcgttca tctgcccggt acgcatggtg gacaacggca cccgtgcctc ggccgacagc
      361 agccgcatgg tgatctcgtt acgccccatc tccaggctga acagcaccgt gctcatgctg
      421 ttcctgatgg cggccgcccg cgcgaagtcc agcgccagtg tcgagttatg cgtcgggatc
      481 atggagcgac tggccaggta catatggtct gcgctttcaa cctgcacgca ccgaaccggc
      541 acgctctcca ccggtcgcac cgcggtgatg aagcgctgcc gggtgcgtgg ggtcgtgctc
      601 tctggcctgc gttcacggtg aataacccgc ttccgctcga ggcggaagac gtcatcggtt
      661 gtggtgaagg tgatcgtgta ggcgacggaa gattctgcgg atgcgccatg cacttgcttc
      721 agcgaccagc cacagcggta accgagggac acaaccagtt cgcgcacgtc ttcggccagg
      781 cgccgcgaag tgacactgaa ttgggctgaa cccgtcgacg tcaccgtgcc gtcactgtcg
      841 agcagtccag ccagcagcgc acggcgctga ctccgtgaac tgcggaggta tatcgctggg
      901 atgtgctttt cgccgagcac gccgagggag cggaggacgg cctgcacggt tccgtggtca
      961 cagcggcaag cctggcactg cctgaaccca ctggacggct tcccgcagtc gggacatacc
     1021 ggctgggatg acgctcccag gcgtgaacgc cactctgccg aacgtgaccg gccgccg
//
LOCUS       DASRPQ010002155         2228 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4644563, whole genome shotgun sequence.
ACCESSION   DASRPQ010002155 DASRPQ010000000
VERSION     DASRPQ010002155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2228
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4644563"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..587)
                     /locus_tag="VFD73_24405"
     CDS             complement(<1..587)
                     /locus_tag="VFD73_24405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HZI77118.1"
                     /translation="MSVVDRSSSEFKDYLQLYERASLLELGQLADAERWRQHPENIVT
                     YIIDRNINYTNVCVADCKFCAFYRRPKHLEGYVLSFEQIGAKIDECKAIGGVQILLQG
                     GHNPYIPFEWYLDLMRYIKRHHPIHIHGFSPSEIVFFSQRFAMSVAEVVRELRAAGLD
                     SIPGGGGEILVDEVRQQVARKKAQTEEWLGVQEEA"
     gene            complement(684..1505)
                     /locus_tag="VFD73_24410"
     CDS             complement(684..1505)
                     /locus_tag="VFD73_24410"
                     /inference="COORDINATES: protein motif:HMM:NF014658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis protein"
                     /protein_id="HZI77119.1"
                     /translation="MRLGRIPWINCYPIYGAIDRGLIEVSAEIVSGTASELNDLLAAG
                     ALQVSAVSAVEYARNAAMYHLLPDLAITCDGPVHSVVLFSKRPVNELSGRTVLLSASS
                     RTSILLLELLTRHRWNIRPQYATARAEANDLATLAALPHDAVLVIGDAALHLSASAAY
                     PVRVDLGEEWKAWTGLPFVFAVWAARRDAAEAAVANLHQKLLESRAWGLSHLDELAAA
                     AAHNTGVAEPVCRAYLDKLDYALSYRHLAGLTDFFRRLAQDGLVPDGSLSFISAA"
     gene            complement(1502..>2228)
                     /locus_tag="VFD73_24415"
     CDS             complement(1502..>2228)
                     /locus_tag="VFD73_24415"
                     /inference="COORDINATES: protein motif:HMM:NF039584.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77120.1"
                     /translation="AHLARIEKISVREVLQAMQEAGLTSLPGGGAEVFSTAVRATIAE
                     RKLTGEEWLGVHRVAHQLGIPTNCTMLYGHVETAEDRIEHLEMLRSLQDETGGFLTYI
                     PLAYHPDHNELGEEIGRVGTATTGYEDLKNIAVGRLYLDNIPHVKTHWPMVTPFISQI
                     ALSFGCDDVEGTVVYERIYHEAGAHTAMHLPYLELVRLIRGAGKRPVERDSLYRVVRE
                     QFDDPPPEPILGRRATLPVVHAA"
BASE COUNT          426 a          716 c          659 g          427 t
ORIGIN      
        1 tgagcctcct cctgcacgcc gagccattcc tccgtctgag cctttttcct ggccacctgc
       61 tgccgaacct catcgaccag gatctcgccg ccgccaccag gaatgctgtc gagtccggct
      121 gcccgaagct cccggactac ctcggccacc gacatcgcga accgctggct gaagaacacg
      181 atttccgacg gcgagaaccc gtggatgtga atcggatgat gtcgcttgat atagcgcatc
      241 agatccagat accactcgaa cgggatgtac ggattgtggc cgccctgcag gagaatctgg
      301 acgccaccga tcgccttgca ttcatcgatc ttggcgccga tctgctcgaa gctcaggaca
      361 taaccttcca ggtgcttcgg ccggcggtaa aacgcgcaga acttacaatc agcgacacag
      421 acgttggtgt agttgatgtt ccggtcgatg atgtaggtaa cgatgttctc ggggtgctgc
      481 cgccagcgct ccgcgtcggc cagctgcccc agctccaaca ggctggctcg ttcgtacagc
      541 tggaggtagt ccttgaattc gctagaactc cggtctacaa cgctcatgct ggtatatcct
      601 tagagtcttg atctcactcc acttctctgc cgttccactg ttccgaccgc atctccattt
      661 ctgcctcttc cgccctttct cgctcacgct gccgaaatga acgacagcga cccgtccggc
      721 accagaccat cctgagcgag acgccgaaag aaatcggtca accccgccag gtggcgatac
      781 gacaaggcgt aatcgagctt gtccagatac gctcggcaaa ccggctccgc tacgccggta
      841 ttgtgggcgg cggcagctgc cagctcgtcc agatggctca atccccaggc acgagactcg
      901 agcagctttt gatggagatt tgccactgcc gcttccgcgg catcacgtct tgcggcccac
      961 accgcgaaca caaacggaag cccggtccac gccttccatt cctcacccaa atcgacgcgg
     1021 accgggtacg ccgccgaggc agagagatgc aaggcagcat ctccaatgac gagcaccgcg
     1081 tcgtgaggca gcgccgccaa ggtggcgaga tcgttggcct cagcgcgtgc cgtggcgtac
     1141 tgcggacgga tgttccagcg atgccgggtc aggagctcca gcaacagaat cgacgtacgg
     1201 gaggaagcgc tcagcagcac tgtgcgtccg gatagctcgt tcaccgggcg cttcgagaac
     1261 agcacgacgc tgtgcaccgg gccgtcgcag gtaatggcaa ggtcgggcag caggtgatac
     1321 atcgccgcgt tgcgcgcgta ctcgaccgcg gagacagcgc tcacctgcaa cgccccggcg
     1381 gcgagaagat cattcagctc cgaggcggtg ccggagacga tttcagcaga cacctcgatc
     1441 agtccccgat cgatcgctcc atagatcggg tagcagttga tccaggggat ccggcccagt
     1501 ctcacgcggc gtgcactacc gggagggtcg ctcggcgccc gaggatcggc tccggcggtg
     1561 gatcgtcgaa ttgttcccgt actacccggt agagcgagtc gcgctcgacc ggtcgtttcc
     1621 ctgccccgcg gatcagtctc accagttcca gatagggcag atgcatggcc gtatgcgcac
     1681 cggcttcatg atagatccgc tcgtagacca cggtgccttc gacatcgtcg cagccgaagc
     1741 tcagggctat ctgagagatg aacggggtga ccatgggcca atgggtcttc acatggggaa
     1801 tgttgtccag gtacagtcgg cccacggcga tgttcttgag atcctcgtag ccggtggtgg
     1861 cagtgccgac ccggccaatc tcctcgccca attcgttatg atcgggatga taggccagtg
     1921 ggatgtaggt caggaatccg ccggtctcat cctgcagcga gcggagcatc tccaggtgct
     1981 cgattcggtc ttcggccgtc tcgacgtgac cgtacagcat ggtgcagttg gtcgggatgc
     2041 cgagctgatg cgccacccgg tgcacgccga gccactcctc accagtgagc ttccgttctg
     2101 caatggtagc gcgcactgcc gtgctgaaca cttcggcgcc gcctccgggc aggctggtca
     2161 gtcccgcctc ctgcatggcc tggagcacct cacgcaccga gatcttctcg atgcgagcaa
     2221 ggtgagcg
//
LOCUS       DASRPQ010002156         1052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4317567, whole genome shotgun sequence.
ACCESSION   DASRPQ010002156 DASRPQ010000000
VERSION     DASRPQ010002156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4317567"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..524
                     /locus_tag="VFD73_24420"
     CDS             <1..524
                     /locus_tag="VFD73_24420"
                     /inference="COORDINATES: protein motif:HMM:NF020918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HZI77121.1"
                     /translation="RAVTDEAARVGQQTARAGADVLRRSTETTRDTFQAGLNTATETF
                     QRATDQFTKVLGFSGPQAEEVARRSSENVQAVTQASTVLARGAQEVSQEVFGLVQDRL
                     QKNLDAVNRLVGTRSVQDFVAVQSDLARDTLQQVIETNRRIAKVSLRIANEAGQIIQA
                     QADKNAKQARRAA"
BASE COUNT          177 a          326 c          350 g          199 t
ORIGIN      
        1 ctcgcgccgt aaccgacgaa gcggcccgcg tgggccagca gaccgcccgc gccggggccg
       61 atgtgctccg ccgcagcacc gagacgacac gagacacgtt ccaggcaggt ctgaacacgg
      121 cgaccgaaac cttccagcgc gctaccgatc agttcacgaa ggtgctgggc ttctccggtc
      181 cgcaggccga agaggtcgcc cgccgctcct cggagaacgt tcaggcggtg acccaggcca
      241 gcacggtcct ggcccgtggt gctcaggagg tctcgcagga ggtatttggc ctcgtgcagg
      301 accgcttgca gaagaacctc gatgcggtga accggcttgt gggcacccgc tcggtgcagg
      361 actttgtggc ggttcagagc gatctggcgc gggacacctt gcagcaggtg atcgagacca
      421 accggcgcat tgccaaggtg tcgctgcgca tcgccaacga ggcgggtcag atcatccagg
      481 cccaagcgga caagaacgcc aagcaggcgc ggcgcgcggc ttaacgcgga cgggttttga
      541 ggaaacgcct ataggcccgg cccagcgccg ggcctttcgc gtcggggttg gttgtcaccg
      601 gctcaagacg atggcgcata gctcccctgc atccttcccc cttacatttg tgcagtgcag
      661 catttaattg tgcactgcac catcgggcat gtcgttcggt gttgcagccc tccttgggcg
      721 tttcctccct cgacttgggc tgccctccgg ggcggcccct ttttcgggtg gaggatcatc
      781 gtgcgccagt tcggctgctg gcctgcaatg cgggtgattg ctggctcagg gttgggggcc
      841 tgacacagat caagcgcaag ttgcccgagt ggtgtatgct gttttggagg gggttcatgg
      901 ggccttgccc aagacaggtc ttggaggctg atgtgaacca gtcagcgaac ttacggcctg
      961 agccggttcg aacgagacga acgccgtcca aggcggtccg caatcgcctg ctgttggccc
     1021 tctcagttca ggacttcagc cgtcttgagc cg
//
LOCUS       DASRPQ010002157         1500 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3722257, whole genome shotgun sequence.
ACCESSION   DASRPQ010002157 DASRPQ010000000
VERSION     DASRPQ010002157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1500)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1500)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1500
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3722257"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="VFD73_24425"
     CDS             complement(<1..182)
                     /locus_tag="VFD73_24425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77122.1"
                     /translation="MQVRQLVVRGYRNLAELEREVPPRGVAILGANAQGKTNLLEAIY
                     YPVLFRSFRGAPDQQIA"
     gene            complement(182..583)
                     /locus_tag="VFD73_24430"
     CDS             complement(182..583)
                     /locus_tag="VFD73_24430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77123.1"
                     /translation="MPAVGLGLGCLAGMIGGCGERERLTFPDPGDGVGPVTTIDQPNG
                     PDTSVSAGPQLFVAGRTIDPNGVDTVYFLVSGGDQSFQPFLPNPPTDTVHFGLQIVTS
                     GHAGDTISIGVLGVDSQGNRGNLSSRRIFVR"
     gene            complement(665..>1500)
                     /locus_tag="VFD73_24435"
     CDS             complement(665..>1500)
                     /locus_tag="VFD73_24435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HZI77124.1"
                     /translation="TFPIEISCSLKPRLSRTPMASTLIFDLTDGIARVTVNRPDKLNA
                     LNAIVIAELADAVTRIETDAAVRGVIVTGAGSKAFVAGADITELIDQGVAGGRARAMT
                     GQQVFRRLERCGKPVIAAVNGFALGGGCELAMACHLRIAGENAKFGQPEVKLGIAPGY
                     GGTVRLPRLIGRARALELLLTGEMIDAEEARRIGLVNRVVPSDQVVPESESVLRTILA
                     NGPLAVRACLEAVDSGLEMSIDQALQLEAGYFGLLSATADMHEGTQAFVEKRKPAFTG
                     S"
BASE COUNT          283 a          486 c          463 g          268 t
ORIGIN      
        1 gcgatctgct gatccggcgc cccgcgaaat gagcggaaga ggaccggata gtagatggct
       61 tccagcaggt tggtctttcc ctgggcgttg gcgccgagaa tcgctacccc tctgggcggc
      121 acctcacgct cgagctcggc caggttgcgg tagcctcgaa caaccagctg acggacctgc
      181 actaccgaac aaagatccgg cgtgacgaaa ggtttccgcg gtttccctgc gaatctacgc
      241 caaggactcc gatggaaatg gtgtctccgg catgcccgct ggtgacgatt tgcaggccga
      301 agtgcaccgt gtccgtgggc gggttgggaa ggaacggctg aaaactctga tcgccgccac
      361 tgaccaagaa gtagacggta tcgacaccgt tcggatcgat ggtacgaccg gccacgaaca
      421 actggggtcc cgcactgacc gacgtgtctg gaccgttcgg ctggtcgatt gtcgtaaccg
      481 gaccaacgcc gtcccccggg tcaggaaacg tcaatctttc ccgctcgccg catcccccga
      541 tcatccccgc caaacagccc aggccgagcc ctactgccgg catcccaaag cggtccagcc
      601 aacggggtct cccccttctc cacatcccta aaaaatagtc ggttggacgg cggaattgca
      661 ggtttcagga gccggtaaat gccggcttcc gcttctcgac aaaggcctgg gttccttcat
      721 gcatgtcggc tgtggcggag aggagtccaa agtacccagc ctccagctgc agcgcttgat
      781 cgatgctcat ctcgagccca ctgtcgactg cctccaggca ggcccgaact gcgagtggtc
      841 cgttggccag tatggttcgg agtacgctct cggattcggg gaccacctgg tccgacggga
      901 ccacgcgatt gaccagaccg atccggcgcg cctcctcggc atcgatcatc tcgccggtga
      961 gcagcagctc cagggcgcgg gctcggccga tcaggcgagg cagtcgcacc gtgccgccat
     1021 agcccggtgc gatgccgagc ttgacctccg gttggccgaa tttcgcgttt tcacccgcga
     1081 tgcgtagatg acatgccatg gccagctcgc agccgccgcc cagggcgaag ccgttcaccg
     1141 cggcaatcac gggcttgccg caacgctcga ggcgtcggaa cacctgctga cccgtcatgg
     1201 ctcgcgcacg cccacccgca acgccttggt cgatcagctc ggtaatgtcg gcgccggcga
     1261 cgaacgcctt gctgccggca ccggtcacga tgacgccacg cacagcggcg tcggtctcga
     1321 tgcgggtgac tgcatcagcc agctcggcga tcacgatggc gttcagcgca ttgagcttgt
     1381 ccggccggtt gaccgttacc cgggcgatac catccgttag gtcgaagatg agggtcgagg
     1441 ccataggggt tcggctgagc cgaggcttga gcgaacagga aatctcaatg ggaaacgtat
//
LOCUS       DASRPQ010002158         1215 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_258765, whole genome shotgun sequence.
ACCESSION   DASRPQ010002158 DASRPQ010000000
VERSION     DASRPQ010002158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258765"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            116..493
                     /locus_tag="VFD73_24440"
     CDS             116..493
                     /locus_tag="VFD73_24440"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77125.1"
                     /translation="MADSLARLRTAFAGHYTIERELGRGGMAIVYLGRDLRHDRFVAL
                     KVLHSELAATLGPERFQREIKLAARLQHPHILTVLDSGDSAEQLWYTIGGLWGDVTLG
                     WGWFGLPEAKGKILRDKSGSWSN"
     gene            857..>1215
                     /locus_tag="VFD73_24445"
     CDS             857..>1215
                     /locus_tag="VFD73_24445"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HZI77126.1"
                     /translation="MAPELREQLQAHLGSAYTIERELGGGGMSRVFLAEEVRLERTVV
                     VKVLPPQMAAGVSVDRFEREIRLAARLQHPHIVPLLSAGSAGDLLYYMMPHIEGESLR
                     ARLAHDHELPIGETVRIL"
BASE COUNT          208 a          382 c          400 g          225 t
ORIGIN      
        1 tacgccgccg gcttgaccgc atccgagtcc cgtccctggc ttgctcctgc gaccatttgg
       61 tcctctggct gcaccgcgtg gcacccccta tgatcaggga ccctcggagc ttcacgtggc
      121 tgactcgctg gcccgtttgc gcacggcctt cgctggacac tacacgatcg agcgtgaact
      181 cggccgcggg gggatggcca ttgtctacct gggacgggat ctcaggcacg accgctttgt
      241 cgcgctgaag gtcctccact ctgagctcgc tgccaccttg ggccccgagc ggttccagcg
      301 cgagatcaag cttgcggctc gcctccagca tcctcatatc ctgaccgtac tcgattcggg
      361 tgattccgct gagcagctct ggtacacgat cggcgggtta tggggcgacg tgacgctggg
      421 ctggggctgg ttcggattgc cagaagccaa gggaaagatc ttaagggaca agtcgggttc
      481 ttggagcaac tagaaaaagt cattcgcgga agtgcagcgg gtggcggagg ttctggagcg
      541 ccggatagta atagaggacc gtcggccggc ggtcactgaa tcgcagcgaa ttcaagaagg
      601 ccaactctcc tgcggtccca ctcccgctga gcatcggatc gggcggaaac tcgagcagtc
      661 gttctaagat gcgcgtggca gcggactgcg agtccggtgt ccggacctaa gctgcgttag
      721 agtcccatgc tggaacggac tttcctcgac tgtttgccag tcctgcaatc cgggcggacg
      781 atgtgacaca acttggcgct ctagcaacga ggggccgagg gacctaacgt agggcggcgg
      841 cgtctccgga aggagcatgg cgcccgagct ccgcgagcag ttgcaggccc atctcggcag
      901 cgcctacacc atcgagcgcg aactcggcgg cggtgggatg agtcgtgtct tcctcgcgga
      961 ggaggtgcgg ctcgagcgca ccgtcgtcgt gaaggtcctg ccgccccaga tggcagcggg
     1021 ggtgagcgtt gaccgtttcg agcgcgagat ccgcctcgcc gccaggctcc agcaccccca
     1081 catcgtgccg ctcctcagtg ccggctccgc gggcgacttg ctctactaca tgatgccgca
     1141 catcgaaggc gagtcgctgc gcgctcggct cgcgcacgac cacgagctcc cgatcgggga
     1201 aacggtgcgg atcct
//
LOCUS       DASRPQ010002159         1641 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1185178, whole genome shotgun sequence.
ACCESSION   DASRPQ010002159 DASRPQ010000000
VERSION     DASRPQ010002159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1185178"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..470)
                     /locus_tag="VFD73_24450"
     CDS             complement(<1..470)
                     /locus_tag="VFD73_24450"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZI77127.1"
                     /translation="MQSAETVLGVLRERGRKGLPCNELYRQMFNRDLYLMAYGRIYAN
                     QGAMTPGADAETADGMSEDKIDKIIEAMRHERYRFRPARRIYIPKKNGKLRPLGLPSW
                     SDKLVGEVVRLLLEAYYEPTFSDHSHGFRPGRGCHTALRKVEATWTGSTWFIEG"
     gene            1026..>1641
                     /locus_tag="VFD73_24455"
     CDS             1026..>1641
                     /locus_tag="VFD73_24455"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZI77128.1"
                     /translation="MAQRQASPHTVASYRDTFSLLLRFAQQQLGKPPSMLDVTDIDAE
                     LVGAFLDHLESERGNCAATRNNRLAAVHSLFSYAALRCPEHAATIGRVLAIPPKRTDT
                     TIVCFLTDDEVQALLASPDRTTRPGRRDHLLLLVAVQTGLRVSELAGLTCGDVTLGAG
                     ASLRCRGKGRKERCTPLTRSTARVVRDWLTERRGEPTDPLFPNRA"
BASE COUNT          256 a          603 c          472 g          310 t
ORIGIN      
        1 tcaccctcta taaaccacgt gctcccggtc caggtcgcct cgaccttccg cagtgcggtg
       61 tggcatcccc tgcccggccg gaacccgtgc gaatggtcgg agaacgtcgg ctcgtagtag
      121 gcctccaaga gcaggcgcac cacttccccg acgagcttgt ccgaccagga cggtagtccc
      181 agcggccgta gcttcccgtt ctttttcggg atatagatcc gccgggccgg acggaagcga
      241 taccgctcat ggcgcatcgc ctcaatgatc ttgtcgatct tgtcctcgga catgccgtcc
      301 gcggtctccg catcagcccc gggagtcatc gcaccctggt tggcgtagat cctcccgtag
      361 gccatcaggt acaggtcgcg gttgaacatc tgtcggtaca gttcgttgca cggcaggccc
      421 ttcctgccac gttcgcggag gacacccaac accgtctcgg cactctgcat tacgcatccc
      481 ttccggttgt ggtatccgat cacctgtgcc ccttcgccct gtggacggcc ttcccgtcct
      541 cctatgggcg ggcgtaactc cgccgactac atacgggcac tctgtcgcca taggactcgc
      601 gtcccttagg cgatcccatg tttcgctcgt gttatacgtt ctagcgcgac ttaggcggcc
      661 cacgcatctc cttgaatgcc ctcgttgggc atcgctccgg ctcccagagg tgtgccacag
      721 gcaagcctgc atcctgcggc agggaccggc gccggtttca gacgtctttc cggcgggtgt
      781 gaagttgcac cttctggaga ttaggcttca ggcaatccgg ctttcgccat atcgcgcgga
      841 tcccctaacg cgtcaccccg tacgcctggg catgaccgct agtttcctgg catgctctgg
      901 tccccatcgt tgtctttcga ctcagggtca gccatcggat ccagagactc acctcccatc
      961 tctccccgct aagcgaggga tataacactg cgctccatgg cgcagaggcc tacttcaccc
     1021 agcggctggc ccagcgccag gccagtccgc acaccgtcgc ctcctaccgc gacaccttca
     1081 gcctgctgct gcgcttcgcc cagcaacagc tcggcaagcc gccctcgatg ctcgacgtca
     1141 ccgatatcga cgctgagctg gtcggggcgt tccttgacca cctcgagtcc gagcgcggca
     1201 actgcgccgc gacccgcaat aaccgcctcg cggcagtgca ctcgctgttc tcctacgcgg
     1261 cgctgcgctg ccccgaacac gccgcgacca tcggccgggt cctggcgatc ccgccgaaac
     1321 gcaccgacac caccatcgtc tgcttcctca ccgacgatga ggtccaagcg ctgctggcca
     1381 gcccggaccg gacgactcgg cccggccgac gcgatcacct actgctgctc gtggcggtcc
     1441 aaactgggct gcgcgtctcc gagctggccg ggctgacgtg cggcgatgtc accctgggcg
     1501 ccggtgcgag cctgcgctgc cggggcaagg gacgaaagga acgctgcacc ccgctgaccc
     1561 gctcgacggc gcgggtggtc cgcgactggc tgaccgagcg ccgcggcgag ccgaccgacc
     1621 cgctattccc gaaccgggcc g
//
LOCUS       DASRPQ010002160         1387 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_877195, whole genome shotgun sequence.
ACCESSION   DASRPQ010002160 DASRPQ010000000
VERSION     DASRPQ010002160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1387
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_877195"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..>1387
                     /locus_tag="VFD73_24460"
     CDS             167..>1387
                     /locus_tag="VFD73_24460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003404757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
                     /protein_id="HZI77129.1"
                     /translation="MKETPVTDVTSSQDQEQPELPAADEQLLRELTDRARTGGLRLTG
                     EGGLLGKLTKMVVEGALEGELNDHLGYEKSDPAGRNGGNSRNGHRAKTVLTDTGPVEI
                     SVPRDRDSSFEPKIVAKRQRRLTGVDEMVISLSAKGLTHGEIAAHLAEVYGAEVSKQT
                     ITAITDRVMEGLAEWQSRPLDSVYAVIFIDAINVKIREGQVANRPIYLALGVTVDGER
                     DVLGLWAGEHGDGEGAKYWLRVLSEIKNRGVRDVCMLVCDGLKGLPDAVSAVWEKTIV
                     QTCIVHLLRNSFKYASKRDWAQIAKDLKPVYTAASESEALDRFAEFSGKWEKRYPAII
                     RLWENAWAEFVPFLRFDREIRTVICTTNAIESINARLRRAVNARGHFPTEQAALKCLY
                     LAIMSLDPTGKGRKR"
BASE COUNT          279 a          405 c          487 g          216 t
ORIGIN      
        1 gagcccaccg acgccgatag cgaagtcatc cggcatgacc ggctcggcgg gctccttcac
       61 gaatactccc aggccgcata gggtggacga cttttcggca cccacacgct tgatccgggc
      121 gcggataact gactgggact gtaatctcaa cggtgtaact cctgagatga aggagacacc
      181 agtgactgat gtgacgagta gtcaggacca ggagcagccc gagctgccgg cggctgatga
      241 gcagctgctg cgggagctta ccgatcgggc ccggaccggc gggctgaggc tcaccggcga
      301 gggcgggctg ctaggcaagc tgaccaagat ggtcgtcgaa ggcgccctcg agggcgagct
      361 gaacgaccat ctcggctacg agaagagcga cccggccggc cgcaatggcg gcaattcccg
      421 caacgggcac cgggccaaga ccgtgctcac cgataccggg ccggtggaga tttcggtgcc
      481 gcgagaccgg gattccagtt tcgagccgaa aatcgtcgcc aagaggcagc ggcggctcac
      541 cggagtcgat gagatggtga tttccctatc ggcgaaaggg ctgacgcacg gggagatcgc
      601 cgcgcacctg gcggaggtct atggcgcgga ggtctcgaag cagacgatca ccgcgattac
      661 cgaccgggtg atggagggcc tggcggaatg gcagagccgg ccgctggatt ccgtgtatgc
      721 ggtgatcttc atcgacgcca ttaacgtgaa gatccgcgag ggccaggtcg ccaaccggcc
      781 gatctacctg gcgctgggcg tcaccgtgga cggcgagcgg gacgtgctgg gcctgtgggc
      841 cggagagcac ggcgacgggg agggcgccaa gtactggctg cgggtcctgt cggaaatcaa
      901 gaaccgcggt gtccgggatg tgtgcatgct ggtctgcgac gggctgaaag gcctgcccga
      961 cgcggtgagc gcggtgtggg agaagaccat cgtgcaaacg tgcattgttc atcttctgcg
     1021 gaattcattc aaatatgcct cgaagaggga ctgggcgcag atcgccaagg acctcaagcc
     1081 ggtttacact gcagcgtccg agagcgaggc gctggaccgg ttcgccgaat tcagcgggaa
     1141 atgggagaag cgctacccgg ccattatacg gctctgggag aacgcatggg cggaattcgt
     1201 gccattcctg cggttcgacc gggaaatcag gaccgtaatc tgcacgacga acgctatcga
     1261 gtcgattaac gcccggctcc gccgcgccgt caacgcccgg ggccacttcc cgaccgagca
     1321 ggccgccctg aagtgcctgt acctggcgat catgagcctg gacccgaccg ggaagggccg
     1381 caagcgg
//
LOCUS       DASRPQ010002161         1187 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1845139, whole genome shotgun sequence.
ACCESSION   DASRPQ010002161 DASRPQ010000000
VERSION     DASRPQ010002161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1187
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1845139"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(351..>1187)
                     /locus_tag="VFD73_24465"
     CDS             complement(351..>1187)
                     /locus_tag="VFD73_24465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77130.1"
                     /translation="ELRMRSIVTLCLAVALAAAPLKAQDNASDATTWELEGLRSAFCV
                     QLLLDPASELLHGLPSGWHAVPATAASNLHVSLRSVIEGQTEYASWSPSSLCFTTVDT
                     VRTKDFSLADKSGRRPQLFGYWTVLAAGPSGTPQDVALDLFASSDRLVRSARLAGQEL
                     HEARLTVGKVPAEDENGVPSADDRFQVKLSGALITWDGHLAGDSVSVAEPIVHTWTVS
                     GMRGGVLTGSLTLSPAGSQPMAGSLKVDGKTDLAKALRASPTRFAGPSFRGGAGKVTF
                     AR"
BASE COUNT          246 a          361 c          377 g          203 t
ORIGIN      
        1 ctccagatgc gccgggcccg caggagtccg gaacggtccg gatgaggcac gttcaggtgc
       61 gacaaagcag ctcgacaggc agtttccaca tgttgaaaag ttagagaagt gaatatctgg
      121 attcggggaa acgaggcaga aaatcagtcg aaaatgagct tgaatatact tgaagtctgg
      181 ttatcgatat tccagctgca taggaagttg cgtggataca atttacggct cctcgaaccc
      241 gtgaccccgc tctggaatgg cccgacaatt attcagatcg gctgattatg aacatcttcg
      301 acatgcatgg gcctgcaccc gtggcttccc aaagtgggaa cgtcgaagtt tcatcgagca
      361 aaggtcacct ttcctgctcc gccccggaat gacgggccgg caaaccgggt gggcgaggct
      421 cgaagggctt tggcgaggtc agtctttcca tcgactttga gcgagcccgc cataggctgt
      481 gaaccggccg gcgagagcgt gagcgaaccg gtgaggacac cacccctcat cccgctcacc
      541 gtccacgtat gcacgattgg ctcggcgacg gacacgctgt ccccagcaag atggccgtcc
      601 caagtgatca gagcgccgct cagcttcacc tgaaaccgat catcggcgct ggggacgccg
      661 ttctcatcct ccgccggaac cttccccacc gtgagccgag cttcgtgcag ctcctggccg
      721 gccaatcgcg cggaccggac cagtcgatcg ctgctggcga acagatcgag cgcgacatcc
      781 tgcggagtgc ccgagggccc ggccgcgagc acggtccagt acccgaagag ctggggtcgg
      841 cggccactct tgtcggccag cgagaaatcc ttggtgcgaa cggtgtcgac ggtcgtgaag
      901 cacaggctgg acgggctcca ggaggcgtac tcggtctggc cttcgatcac gctgcgcagt
      961 gagacgtgca ggttgctcgc ggccgtggca ggaaccgcat gccagccgct gggaaggccg
     1021 tgcagcagct cggaggcagg atccaggagc agctgcacgc aaaaagcgga gcgaagcccc
     1081 tccaactccc acgtcgtggc gtccgatgcg ttgtcctgcg ccttcagcgg agcggcggcc
     1141 agggccaccg cgaggcacag ggtgacgatc gaacgcatgc gcagctc
//
LOCUS       DASRPQ010002162         1136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3722619, whole genome shotgun sequence.
ACCESSION   DASRPQ010002162 DASRPQ010000000
VERSION     DASRPQ010002162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1136
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3722619"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            298..789
                     /locus_tag="VFD73_24470"
     CDS             298..789
                     /locus_tag="VFD73_24470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77131.1"
                     /translation="MLGFRRWLAVAPGPFILGIAGYSIICWFGFVVAATLMARDLAQA
                     SLIGIVVGGVIELAALVLAAFVWLLGLGAFLLLRLLYRTVGAVAPGVLRTYLDTSAPP
                     WAGWGANEHLIRLAVPPQITTLRVAEGAPLSSLISQAEEATFAGLEGVIRGPWPTPDP
                     AAP"
BASE COUNT          166 a          379 c          382 g          209 t
ORIGIN      
        1 ccagagaatc cggctccgac ggagtccggt caaatctctg tcgatcccga cgcaccggtc
       61 gacgcaggca acgcttggcc gtcgcccgcc cggcatcgtc cccggtttcg tccgggacgt
      121 gttcgcccac ctgggcggaa accccgcgga atcagccggg tcggacacta ggtcagtcac
      181 tcgctggggc tcgccttcct cagggtcttc gctttactgg gaagcgctgt cagcggggaa
      241 agtacacatg acctttggct gtggaaggac cccgagaagc ccacgggaaa gttcgctgtg
      301 ctggggttca ggcgctggct cgccgtagcc cccgggccgt tcatcctggg tatcgccggg
      361 tattcgatca tctgctggtt cgggttcgtt gttgcggcga cgctcatggc aagagatctg
      421 gcccaggcgt cgctgatcgg gatcgtggtc gggggagtga tcgagctcgc cgcgctcgtg
      481 ctggcagcgt tcgtatggct tctggggcta ggagccttcc ttctgctccg actgctctac
      541 cgaaccgtgg gggccgtcgc gcccggggtg ctccgaacct acctggatac gtcggctcca
      601 ccctgggccg ggtggggtgc gaatgagcac ctcattcgac ttgctgtgcc accacagatc
      661 acgaccctcc gcgtggctga gggagccccc ctgagttccc ttatcagcca ggccgaggag
      721 gcgacgttcg ctggccttga gggagtcatc agaggtccat ggccaacccc tgaccccgcc
      781 gcgccctagc ccgaacgatg ctcctcgacc cggcggtcac ccacccgtgc tactgagccg
      841 aagcgtccac ggatgtgtca ggcagagcct atttccgcga tgttgtcgtc cctggcagcc
      901 gcgacaggtg cagtcgcgcg ccgcgcagaa caaacgccga tagcgagccc cagcgctacc
      961 aacagcgcgc gcgtattcgg cgctcaggag cttggcgggt cggcgtcctg ctcacgctcc
     1021 gcggcttcct gcggtgggcg tgcaggccga aggcggatat cgcgccggca tgagctctcg
     1081 tgcgccaggt ggccaggggt gcggatcgtg ccgcgggcga ggcccggtct cgtccg
//
LOCUS       DASRPQ010002163         1174 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3067760, whole genome shotgun sequence.
ACCESSION   DASRPQ010002163 DASRPQ010000000
VERSION     DASRPQ010002163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1174
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3067760"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(578..919)
                     /locus_tag="VFD73_24475"
     CDS             complement(578..919)
                     /locus_tag="VFD73_24475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77132.1"
                     /translation="MVIGIDADEAEYLAEFPDRDECAQRGQQVLPQQAQLPQAPIQQM
                     PIQQVPLQSGPLQSGPLQQVKLTEPALEGTGEYPSSALLGAPVPFGRGRQSADQARDL
                     AGWSSGSFPAR"
     gene            complement(963..>1174)
                     /locus_tag="VFD73_24480"
     CDS             complement(963..>1174)
                     /locus_tag="VFD73_24480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77133.1"
                     /translation="EGAVRQGNRPARHIPEGTLPGSVRSQGRVARCVIQDWPHVLSAP
                     RRAWNLLGNNGARRMDSRSRPDSRS"
BASE COUNT          208 a          389 c          386 g          191 t
ORIGIN      
        1 accatcaacg gctcggacac ggccggtaga cgactctaaa tatattgtac gacgcaaagc
       61 tggataccag cagactctgt tgtccgtagt cacccgacca gcgaggaaaa ccggaatcag
      121 gtcacaccga caccatcagc atcaccgtac cggcgggtcg gacccgctgg aacgccatga
      181 aacccaggat ccagtgcgtt cgagcgcctt ggaagcccgg ttccagtgcg tccgcgttcg
      241 ggcctgggtc cactcttgcg ttcgctcgag cggccgtgcc agaccaggca gaacaccagg
      301 cagcgaccag gcaagatgcc ccagacagca aagaagcctg ggctcggagc ggggcctggc
      361 caccccgagc ccagacggga aaggcgagat acctctcggc ccttcaatga agatcatgcc
      421 ggttgattct tacagcacgc taggacgtag ctgtgaaccc gctttcaagt ggattccgga
      481 tccaggccag gccgggtccg gacgcgggct gcgaggcagc gtcaggcgct cgcgggtggc
      541 tggtccgcgc tgggcggcca cgcggtgagc tgctcgttca cctggccggg aagctacccg
      601 agctccagcc ggccagatcc cgggcttgat ccgctgactg gcggccgcgg ccgaagggta
      661 ctggcgcgcc gagaagcgcc gaactcgggt attcaccggt gccttccagc gctggttcgg
      721 tcagcttgac ctgctgaagc ggacctgact gcaacggacc cgactggagc gggacctgct
      781 ggatcggcat ctgctggatc ggggcctgcg gcagctgtgc ctgctgcggc aggacctgct
      841 gtccgcgttg tgcgcattca tcgcggtcgg ggaattcggc caggtactcg gcctcgtcgg
      901 cgtcgatccc gatgaccacc cggggttcac ccagggttcc ttaagcgagt agccgacgta
      961 gcttacgacc ggctgtccgg gcgcgaccgc gagtccatgc ggcgcgcgcc attgttccca
     1021 agcagattcc aggcgcgtcg cggcgcgctg agcacgtgcg gccaatcctg gatcacgcat
     1081 cgtgcgaccc tcccctgaga gcggaccgac cccggcaacg tgccttccgg gatgtgcctg
     1141 gcggggcgat ttccctgccg gacagcaccc tcgg
//
LOCUS       DASRPQ010002164         2734 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4318242, whole genome shotgun sequence.
ACCESSION   DASRPQ010002164 DASRPQ010000000
VERSION     DASRPQ010002164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2734
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4318242"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..691)
                     /locus_tag="VFD73_24485"
     CDS             complement(<1..691)
                     /locus_tag="VFD73_24485"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HZI77134.1"
                     /translation="MRLQGISELLPSVPWLLPFLTLPRLAQRSPNLSDAPAANNELVS
                     IILPARNEAPNISGVVTSILASTYHPLELIVVDDRSTDDTASEVMRMAGDPRVRLIQG
                     QELPSGWFGKPWACFQGYQNARGKLLLFTDADTRHQPELLTRAVGAMLAERAALLTIS
                     PLQRCVTFWERVVMPQIWFLLALRYSPSRVNRAHKARDVIANGQFILTTREAYEFAGT
                     HAAVRGEVAEDL"
     gene            complement(707..1267)
                     /locus_tag="VFD73_24490"
     CDS             complement(707..1267)
                     /locus_tag="VFD73_24490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77135.1"
                     /translation="MRASQPALLAAGRVIAELRDTMVAQWADWLGDRITAAPTIPRST
                     VEREFRLLFDVMTEMVGPLRREVNTVWFHVCEHYGRVASARGLAAGEVVEELQFLREL
                     LIRNLAPVLVAMRARQGMAIMLRLNRVIDKGVAVAVVGYTDALVATLFSQNGVPSFGA
                     DHDVGDVDRQLDALEQELQAVSQQFE"
     gene            1373..2278
                     /locus_tag="VFD73_24495"
     CDS             1373..2278
                     /locus_tag="VFD73_24495"
                     /inference="COORDINATES: protein motif:HMM:NF014114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HZI77136.1"
                     /translation="MIAPAGPLLETDDLTRAQELCRALGYEPVLGQNAHRRLGYLAGT
                     DEERLSDLNRALGDPNIDAVWCIRGGYGTIRLLERVDYAALSRHPKPVIGFSDVTALL
                     IALNRQSGVVTFHGPVARASMTGFTRTHFERVLTCTERPGQLSRPPLDPDVLVPQTDR
                     IVTLSGGKAEGVLLGGNLSLLQCLLGTQFFPSLRGALLFLEDVGEDLYRVDRMLAHLR
                     LAGAFSGLSGVLVGRFTKLERSNGDGALGFDEVLAMYFRPLSVPVAYGFPIGHVESQW
                     TLPLGVRARLDSDNGELELLEPAVA"
     gene            2300..>2734
                     /locus_tag="VFD73_24500"
     CDS             2300..>2734
                     /locus_tag="VFD73_24500"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HZI77137.1"
                     /translation="MATPTLSKHSVPGALGPILVDVRAGGRTSPRPAVVVLHGFKGFK
                     DWGMFPPFAERLAQAGLSAIAPNLSGSGVDDAGEFSLPERFGHNTFSAELHDLRQVIE
                     ALMDGQLGVAPPSSLGLVGHSRGGGVAILETAEDSRVEALVTW"
BASE COUNT          494 a          895 c          829 g          516 t
ORIGIN      
        1 ccagatcctc cgccacttcg ccgcgcaccg ctgcgtgggt cccggcgaat tcgtaggctt
       61 ccctcgtcgt caggatgaac tggccattcg cgatcacgtc cctggcctta tgggcccgat
      121 tcacccgact gggactgtag cgtaacgcga gaaggaacca gatctgcggc atgacgaccc
      181 gctcccagaa cgtcacacag cgctgcagcg gcgagatcgt gagcagcgcc gcgcgctccg
      241 ccagcatggc cccgaccgcc ctggtcaaga gctcaggctg atgcctggtg tcggcgtcgg
      301 tgaacagaag cagcttcccc cgcgcgttct ggtatccctg aaagcaggcc cacggtttcc
      361 cgaaccaacc ggaaggaagc tcctgcccct ggatcagtct cacccgtgga tcaccggcca
      421 ttcgcatcac ttcggatgca gtgtcgtcgg tggacctgtc gtccaccaca atcagctcca
      481 gcggatggta ggtcgacgcc aagatggacg tcaccacgcc tgagatgttg ggtgcttcat
      541 ttcgggccgg caggatgatg gagaccagct cgttattggc cgccggcgcg tcactcaggt
      601 tgggcgagcg ctgggcgagc cggggcaggg taaggaacgg cagaagccag gggacgctgg
      661 ggagcaactc cgatatgccc tgaaggcgca ctggtgtgcg cctccgctac tcgaactgct
      721 gcgagaccgc ctggagctcc tgctccaatg cgtcgagctg gcggtcgaca tccccgacat
      781 catggtcggc gccgaaggag ggaactccat tctgggagaa gagggtagcg acgagagcat
      841 cggtgtagcc gacgaccgca actgccactc ccttatcgat cacccggttg agccgcaaca
      901 tgatcgccat gccctgccga gcccgcatcg cgaccagcac cggtgccaga ttgcggatca
      961 gcaactcgcg gagaaactgc agttcttcaa ccacttcacc agccgcaaga ccgcgggccg
     1021 atgccactcg gccatagtgc tcgcacacgt gaaaccagac ggtattcacc tcccgtctca
     1081 gtggacctac catctccgtc atgacatcga atagcagccg gaactcccgc tccacggttg
     1141 atcgcggtat cgtgggggcg gcggtgatcc ggtctcccag ccagtccgcc cactgagcaa
     1201 ccatggtatc gcgcagttcg gcgatcacac gaccggcagc gagcaacgca ggctgcgagg
     1261 cacgcactag tcgttctccc gggcaaaggt tctcaaatac tacagtgggg tcataatggg
     1321 gtcaaaaccg ccgcttcgac ccgcaaaact cggtcctgga agtcgagtcg ccttgatcgc
     1381 tccggcagga ccgctactgg aaacggacga tctaacacga gcccaggagc tgtgccgtgc
     1441 gctgggttac gaaccggttt taggccaaaa tgcccaccgc cgcttgggat acctcgccgg
     1501 cacggacgag gaacggctca gcgatctaaa ccgcgctctg ggtgacccca acatagatgc
     1561 agtttggtgc atacgaggcg gctacggcac catccgcctg ctcgagagag tggattatgc
     1621 ggcactaagc cgtcatccca agcccgtcat tggcttttcg gacgtcaccg ccctactcat
     1681 cgctttgaat cggcagagcg gcgtcgtcac cttccacggg ccagttgccc gtgcgtccat
     1741 gaccggattc acccgcaccc actttgagcg ggtgcttacc tgcaccgagc gccccggcca
     1801 attaagccgg cctcccctcg atcccgacgt cctcgtgcct caaactgatc ggatcgtgac
     1861 cctctccggt ggaaaagcag agggcgttct tctgggcggg aatctgagtc tcctacagtg
     1921 tctgctcggt acccagttct tcccatcgct ccggggtgct ctccttttcc tggaggatgt
     1981 tggtgaggac ctctatcgag tggaccgcat gctggcgcac ctgcgcctcg caggtgcttt
     2041 ctccggcttg agcggggtat tggtcggccg gtttaccaag ctcgagcgct ccaacggcga
     2101 tggtgcactc ggatttgacg aggttctggc gatgtatttc cgcccattga gcgttccggt
     2161 agcgtacggc tttcccattg gtcacgtcga gtcgcaatgg acgctgccgc tgggagtccg
     2221 tgcccggctc gattccgaca acggtgagct ggagcttctc gagcctgccg tcgcctgaga
     2281 ccccggctac cattcagcga tggcgactcc cacgctgagc aaacactcgg tcccaggcgc
     2341 cttggggccg atcctggtgg acgtgagggc gggcggccgg acatctcctc gtcccgccgt
     2401 cgtcgtactt catggcttca agggcttcaa ggattgggga atgttcccgc cgttcgccga
     2461 gcggctggca caggctggac tctccgccat cgccccaaat ctgagcggca gcggcgtcga
     2521 cgatgctgga gagttttcgc tgcccgaacg cttcggccac aacacctttt ctgctgagct
     2581 ccacgacctg cggcaggtta tcgaggcgct gatggacggc cagctcggtg tcgctccgcc
     2641 gtccagcctc gggctggtcg ggcattcccg cggaggcggc gtcgcgatcc tcgaaaccgc
     2701 tgaagattcg cgggtagagg cgctcgtcac ctgg
//
LOCUS       DASRPQ010002165         1942 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2795402, whole genome shotgun sequence.
ACCESSION   DASRPQ010002165 DASRPQ010000000
VERSION     DASRPQ010002165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1942
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2795402"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..232
                     /locus_tag="VFD73_24505"
     CDS             <1..232
                     /locus_tag="VFD73_24505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77138.1"
                     /translation="RRHPESSDENVAAIACRRVILGMSGAEVVSAWGRPQDINTTTGA
                     FGRHEQWVWEDGTEMPYQYVYFENGVLTTVQN"
     gene            complement(369..455)
                     /locus_tag="VFD73_24510"
     tRNA            complement(369..455)
                     /locus_tag="VFD73_24510"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(419..421),aa:Ser,seq:tga)
     gene            complement(637..1263)
                     /locus_tag="VFD73_24515"
     CDS             complement(637..1263)
                     /locus_tag="VFD73_24515"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HZI77139.1"
                     /translation="MTRHAAGQAALPLALVLLTGISACKGSNQSGARDSAATAQKADT
                     SAPGAATAAAPRAGMSDSNIVALLDEANKADSASGALALKKATRTDVKNFAKLMMSEH
                     HALRAQGQALAKQLGVTPKLPEKDPLAPYAASEAKALQTTKKGPEFDRTYIDNEVSVH
                     QAVLDFANQARVSTQTAQLRDLIQKAIPVIQKHLDQAQAIQKQISPST"
     gene            1421..1873
                     /locus_tag="VFD73_24520"
     CDS             1421..1873
                     /locus_tag="VFD73_24520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77140.1"
                     /translation="MDWKRRALSILAAPVLAAGLGSCGFDPVGDAPLDPPAIYQDWWA
                     KTEACSGLSGDFNRISWSVIEGSSFSCSSGQCAGHWSEDHHIYLAGDWVMDEMVVRHE
                     MLHELIGRPGHPAPPFGQGCPLTWETWNSGATQLQIGRAAAFPPKAID"
BASE COUNT          369 a          572 c          597 g          404 t
ORIGIN      
        1 gaggaggcac ccggagtcga gtgatgagaa tgtcgcggct attgcctgcc gccgggtgat
       61 tcttggaatg tctggggccg aagtggtcag cgcatgggga cgcccgcagg acatcaacac
      121 gaccaccgga gcattcggac gccacgagca atgggtgtgg gaggatggga cggaaatgcc
      181 gtaccagtac gtttacttcg agaacggtgt cctaaccaca gtccagaatt gaggactagc
      241 gatgcacgac tctgttcaca aaggaaggcc aaggttagcg tttaccctta ggtactctta
      301 ggtactatcc gacaaaaaag gccactgctt gcgagtggcc tccaccatcc taagtattgt
      361 cgtttcagcg gcgtgggtga gattcgaact cacggaacgg tttcccgttc ggcggttttc
      421 aagaccgctc cattcaacca ctctgccacc acgcccggcc ggaaaggtct tgagatcgct
      481 ggatgcaggc aagcccgcga ggtgacctgg agctgagatg gtgctgcagg tctagcgccc
      541 taacctaata tagatcctgc cattcgattg atgcgccaaa agaaaccccc tgcagagatt
      601 ctccgcaggg ggttttcgtt actcgtgggg agccgatcag gtcgaaggcg agatctgctt
      661 ctgaatcgct tgcgcctgat ccagatgctt ctggatgacc gggatcgcct tctgaatcag
      721 gtcccgaagc tgtgccgtct gggtgctgac cctggcctgg ttggcaaagt ccagaacggc
      781 ctggtgcacg ctgacttcgt tatcgatgta ggtgcggtcg aactccggcc cctttttcgt
      841 ggtctggagc gcctttgcct cactcgccgc atagggggcg agagggtctt tctcagggag
      901 cttgggggtt actcccagct gcttcgccaa tgcctgtcct tgggcccgca gcgcgtggtg
      961 ctccgacatc atgagcttgg cgaagttctt cacgtcggtt cgggtcgcct tcttcagagc
     1021 cagcgcgcca ctcgcgctgt cggccttgtt cgcctcgtcc agcaacgcaa cgatgttgga
     1081 atcgctcatg cccgccctgg gcgcggcggc cgtcgcagca ccgggtgcgc tggtgtcggc
     1141 cttttgcgcg gtcgcagccg agtcccgtgc cccactctgg ttcgatcctt tacatgcgct
     1201 aataccggtg agaagcacga gcgccagcgg caacgctgcc tgtcctgctg cgtgacgtgt
     1261 cataaccttc ctcagggtgg ggtcgcatag agttctacac tgcggggaga gttgcagatg
     1321 tgacaagggt cacgagatcc actgagccat actgtcctat agttccaccc cagccgagcc
     1381 gataccaaga ataacccaag aaacggccgg tggagggacg atggactgga agaggcgagc
     1441 actgagcata ctcgcggcgc ccgtgctggc ggcaggtctc gggagctgcg gctttgaccc
     1501 tgtgggcgac gctcctctcg acccgcccgc gatctatcaa gactggtggg caaaaaccga
     1561 agcctgctcc ggcctgagcg gcgattttaa ccggatcagc tggtccgtta tcgagggctc
     1621 gagcttctcc tgctccagcg gccaatgtgc gggacactgg agcgaggatc atcatatcta
     1681 cctggcaggc gactgggtga tggatgagat ggtggtccga cacgagatgc tgcatgagct
     1741 gatcggcaga ccaggacatc cggcacctcc gttcggtcaa ggatgcccgc tcacctggga
     1801 gacctggaac agcggtgcga cgcagcttca gatcggtcgc gccgccgcct tcccacccaa
     1861 agccatcgat taatcgggat ctccccggtc caagttccgg ttcactgctt tggccatcga
     1921 gtccgccctg gcagcttcag cc
//
LOCUS       DASRPQ010002166         1261 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4014105, whole genome shotgun sequence.
ACCESSION   DASRPQ010002166 DASRPQ010000000
VERSION     DASRPQ010002166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1261
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4014105"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            252..1076
                     /locus_tag="VFD73_24525"
     CDS             252..1076
                     /locus_tag="VFD73_24525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZI77141.1"
                     /translation="MITYRVRLDVPRDLVLFVSRLLARHRKEIGTRKGTRCLSCYRQA
                     LFGLAWYRDKADVPRLGAGFGLSQATSYRYIAEVTEVVSAEAPGLEEVLERAVAEGTP
                     YVILDGKIVASDRCREKTVSRKGREIDLWYSGKTKDFGGNVQGLFYPDGLPMWVSDVL
                     PGNVHDLAAAREKVLPVLRKYTGKMPGLADCGYEGAGHGILTPVKKPKGVKELGINAR
                     TRNMLLSSARCLGERGFALLSQRWKTLQNVTASPGKIGQIARAALVLLLFEHKRLT"
     gene            complement(1069..>1261)
                     /locus_tag="VFD73_24530"
     CDS             complement(1069..>1261)
                     /locus_tag="VFD73_24530"
                     /inference="COORDINATES: protein motif:HMM:NF024790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M50 family metallopeptidase"
                     /protein_id="HZI77142.1"
                     /translation="LWSLAKHLEVMSHEGMHAITGSMLGLRVRNVKLKRNGDGQTNFR
                     NAIAGGSGVFTQVFSATFT"
BASE COUNT          238 a          375 c          443 g          205 t
ORIGIN      
        1 aaaggaccgg gttaggccgc gcgacaagaa tgcgagacgt cattcccggc ccgccggggg
       61 acaggtggcg gaggtggctt tccgcgatta ctggcagatt gaggttttct cagtagcgcg
      121 gaacccggca gtcgtgccgt aacggctcat gcaggcagac acgcggacac gggcggacat
      181 agccgggaag gcgcggagct cccggtagaa gaagtctcgc caaagaagtc cgcctgccgg
      241 gagactccgc gttgatcacc tatcgtgtca gacttgacgt gcccagggac ctggtcctgt
      301 tcgtctcgcg gctgctggcc cggcaccgca aggagatcgg tacccggaag ggcacccgct
      361 gcctgagctg ttaccggcag gcgctgttcg gcctggcctg gtaccgggat aaagcggacg
      421 tcccgcggct gggggccggg ttcggcctgt cgcaggcgac gtcgtaccgg tatatagccg
      481 aggtgaccga ggtggtgtcg gcggaggcgc ccggcctgga ggaggtgctg gagcgcgccg
      541 tggccgaggg gacgccgtac gtgatcctgg atggcaagat cgtcgcctcc gaccgctgcc
      601 gcgagaaaac cgtgagccgg aagggccggg agatcgatct gtggtactcg gggaagacga
      661 aggacttcgg cgggaacgtc cagggcttgt tctacccgga cggccttccg atgtgggtct
      721 cggacgtgct gccgggcaat gtccatgacc tggccgcggc ccgggagaag gtgctgccgg
      781 tgctgcggaa gtacacgggc aagatgcccg gcctggccga ctgcgggtat gaaggcgcag
      841 gtcacggcat cctcacgccg gtgaagaagc caaagggcgt caaagagcta ggcattaacg
      901 cgcgcaccag gaatatgctg ctgagctcgg ccaggtgcct gggggaacga ggcttcgcgc
      961 tgctctccca gcggtggaag acactccaga acgtcaccgc gagccccggg aaaataggcc
     1021 agatcgcacg cgccgcactc gtcctgctgc tattcgagca caagcggctc acgtgaaagt
     1081 cgctgagaaa acctgagtga agaccccact cccgccggcg atcgcattgc ggaagttggt
     1141 ctggccatca ccgttccgtt tcagcttgac gttccggact cgaaggccca gcatggaccc
     1201 ggtaatggcg tgcattccct catggctcat cacttccaag tgcttcgcga gagaccacag
     1261 g
//
LOCUS       DASRPQ010002167         1333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_561477, whole genome shotgun sequence.
ACCESSION   DASRPQ010002167 DASRPQ010000000
VERSION     DASRPQ010002167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_561477"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1333
                     /locus_tag="VFD73_24535"
     CDS             <1..>1333
                     /locus_tag="VFD73_24535"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HZI77143.1"
                     /translation="GAGWGLHRALQGERSLDWDRMRNEARDAGASRSKAESDDRFRTL
                     VEQIRDYAVFMVDREGRATTWNEGVRRLLGYEENEFLGQPGQILFTPEDRARGEPERE
                     LRTAAEEGHASDDRWLIRKDGTRFWATGITARLTDRTGNLLGFSKVFRDLTREKQAQD
                     LLRESEERLRMALQAARMGIWRLHLSSNTQRIDQTMARLLGLGDGEVVESYDQFREHI
                     HPDDRERVDAAFGQAAQDGGDMHVEFRVIGPDGTVRWLLDHGEVVRDAFGKPEYLTGA
                     VLDVTERKLAEDRLIEAQRMDAVGHLAGGVAHEINNMMTVILGFSSMLLDGMQGDPRA
                     SDLRQIHRSASRAATITSQLLAFSRRQQLRPQVLDLNQLVRGAEHMLRRVMGADKVFV
                     VELADDLGRVRADPAQLEQVLLNLALNARDAMPMGGTFTITTKNETLPERAA"
BASE COUNT          252 a          397 c          470 g          214 t
ORIGIN      
        1 gggcgcgggc tgggggctac accgggcgct ccagggcgag cggtcgctcg actgggaccg
       61 gatgaggaat gaggctcgcg atgcaggcgc gagccggtcc aaggcggaga gtgacgaccg
      121 gtttcgcacg ctggtcgagc agattcggga ctacgccgtc ttcatggtgg accgggaggg
      181 ccgcgccacg acgtggaacg agggggtccg gaggctgctc ggatacgagg agaatgagtt
      241 ccttggccag cccggtcaaa tcctctttac cccggaagat cgggctcgcg gcgagccgga
      301 gcgcgagttg cgcaccgccg ccgaggaggg tcacgcctcg gacgaccgct ggttgatccg
      361 caaggatggg acccgattct gggccaccgg catcaccgcc cgcctcacgg accggaccgg
      421 aaatctgctc ggattcagca aggtgttccg ggacctcacc cgagaaaagc aggcacagga
      481 cctgttgcgg gagagcgagg agcgacttcg aatggcgctg caggctgccc gcatgggcat
      541 ctggcgcctg cacctctcca gtaacacgca acggatcgac cagactatgg cacgcctgct
      601 tggtctcggc gacggcgagg tcgtcgaaag ctacgaccaa ttccgcgagc acatccatcc
      661 cgacgaccgt gagcgggtcg atgccgcctt cggccaggcg gcgcaggatg gcggtgacat
      721 gcacgtggag ttccgagtga tagggccgga tggtaccgtt cgctggttgt tggaccatgg
      781 tgaggtggta cgtgatgctt tcggaaaacc ggaatatctc acgggagcgg ttctcgatgt
      841 caccgaaagg aagctggccg aagaccggct aatcgaagcg cagagaatgg acgccgtggg
      901 ccatctcgcc ggtggggtgg cgcacgagat caacaacatg atgaccgtga tcctcggctt
      961 cagctcgatg ctgctcgacg ggatgcaagg tgaccccagg gcgtccgacc tgcgtcagat
     1021 tcatcggtcg gcctcccgag cggcgacgat tacgagccag ctgctggcct ttagccgtcg
     1081 ccagcagctg cggccccagg tgctcgacct caaccaactg gtccggggag ccgagcacat
     1141 gctgcgccga gtgatgggcg cggacaaggt gttcgtggtt gaattggctg acgaccttgg
     1201 ccgggttcgc gccgaccctg cgcagctgga acaggtgctg ctcaatctgg cgctcaatgc
     1261 gcgggacgcg atgccgatgg gtggcacctt taccatcacc acgaagaacg agacgctgcc
     1321 ggaacgggca gcc
//
LOCUS       DASRPQ010002168         1334 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3422736, whole genome shotgun sequence.
ACCESSION   DASRPQ010002168 DASRPQ010000000
VERSION     DASRPQ010002168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1334
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3422736"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..743)
                     /locus_tag="VFD73_24540"
     CDS             complement(<1..743)
                     /locus_tag="VFD73_24540"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HZI77144.1"
                     /translation="MRTRSSKRRGARWLGVALLTTLLGLTACSTGPSSGGGGSSGKTT
                     LTLWVDGAISGSPEVPLQVKNFEAAHPGVTIQTVVKPSANYFATLHAALISGKAPDIV
                     SLYAGSYLNTVEPYLQDLNAAGPALPSATLAKVPNEGVWTKSGTVGSGAYAIPESEQF
                     YNGYYNKALFKKAGITALPQTWSQLYAACPKLKAIGVTPIVYGNDGNGGEFWPLAEWS
                     YLLAGATPVSSWNGFLTGTQQYDSPEMVA"
     gene            1032..>1334
                     /locus_tag="VFD73_24545"
     CDS             1032..>1334
                     /locus_tag="VFD73_24545"
                     /inference="COORDINATES: protein motif:HMM:NF020897.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI77145.1"
                     /translation="MEEDVVGEPVREDDLAAANGAGSRDDRYTVRSVQRALRLLEIVA
                     SEPQSGLSLTEIAKTLGVSKSTTLATARTLTAHGILRLIEPGPRYKLGTALIRYGEL"
BASE COUNT          223 a          420 c          449 g          242 t
ORIGIN      
        1 tgggcgacca tctccgggct gtcatattgc tgtgtcccgg tgaggaaccc gttccagctt
       61 gacaccgggg tggccccggc gagcaggtag ctccactcag ccagcggcca gaactcaccg
      121 ccgttgccgt cgttgccgta cacgatgggc gtcacgccga tcgccttcag cttcgggcag
      181 gccgcgtaga gctgcgacca cgtttgcggc agggcggtga tcccagcctt cttgaacagc
      241 gccttgttgt agtagccgtt gtagaactgc tcgctctccg ggatggcgta ggcgcccgag
      301 cccaccgtcc cggacttcgt ccatacgccc tcgttgggca ccttggcgag agtggcggac
      361 gggagcgcag ggcccgccgc gttgaggtcc tgcaggtacg gctcgacggt gttcaggtag
      421 gaccccgcgt agagcgaaac gatgtcgggt gccttacctg agatgagcgc cgcatggagt
      481 gtggcgaagt agttggccga cggcttgacg acggtctgga tggtgacccc ggggtgggcc
      541 gcctcgaagt tcttcacctg caggggcact tcgggcgagc ctgagatcgc cccgtcaacc
      601 cagagcgtga gcgtggtctt gcccgatgag ccgccgccgc cagaggacgg tccggtgctg
      661 caggccgtga gtcccaacaa cgtggtcagc agggcgaccc caagccagcg ggcgccccgt
      721 ctcttactgc ttctcgtacg catcttgtcc tcatcactcc tacgatgttg agtgcctgag
      781 accggagcgg cacgcggtgc taccgtcacg attgttcggt cagaccgaac agtgttgcgc
      841 tataatgcac caatgtagac cggcgccaag agcagggcaa ggagccggcg gtgcttttgt
      901 ccgttagcac catggtggga gtgccgcact gtgacctcgc atgcgtcagg agcgacgatg
      961 cgggcatttg ctgagtattc tgagtaacgc aacagtgtgc tgacaggccg aacaccttgc
     1021 ggcctgcagc catggaggag gacgtggtgg gagagccggt gcgcgaggat gacctggcgg
     1081 cggccaacgg agctgggtcc agggatgacc gctatacggt ccgctcagtg cagcgtgccc
     1141 tgcgactcct cgaaatcgtg gccagcgagc cgcagtcggg gctctcgctg accgagatcg
     1201 cgaagaccct tggcgtctcg aagtccacga ccctggccac ggcccgcacg ctcaccgcgc
     1261 acggcatcct ccgtttgatc gagcccggcc cgcggtacaa gctcggcact gcgctgatcc
     1321 gctatggcga gctc
//
LOCUS       DASRPQ010002169         1059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3423152, whole genome shotgun sequence.
ACCESSION   DASRPQ010002169 DASRPQ010000000
VERSION     DASRPQ010002169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3423152"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="VFD73_24550"
     CDS             <1..207
                     /locus_tag="VFD73_24550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008873154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
                     /protein_id="HZI77146.1"
                     /translation="TSRLTVVDLIASTTTQTGLTVRCELDTNTYPKGIKVSEREMATL
                     NLQRDAFHPDWNYIISPREHDMER"
     gene            361..>1059
                     /locus_tag="VFD73_24555"
     CDS             361..>1059
                     /locus_tag="VFD73_24555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77147.1"
                     /translation="MAWIVRLVSVEADGTEHSADVLQISRPEILADLASLGLTLAESK
                     QLLAGVQQEIVAAQARLHAALRPECRHCGATCRMKDYRQHEIATLFGQVTVRLPRFRC
                     AGCGTTEAGVDWPPRVRSAPELDRLRAQLSALLTYRTAADLLSQMFPVDAGMDPESLR
                     RHTFKVAETLPIRPATETPVSAGVETVTLTLDATFVRSCEDGERHLEVRIGNVETEAG
                     GRQVFGAVAKTDTDL"
BASE COUNT          203 a          343 c          335 g          178 t
ORIGIN      
        1 accagccgcc tcaccgtagt cgacctgatc gccagtacca cgacccagac cggcctgacc
       61 gtccgctgtg aactcgacac caacacctat ccaaagggca tcaaggtgtc cgagcgggag
      121 atggcaactc tcaacctcca acgcgacgct ttccatccag attggaacta catcatctca
      181 cccagagagc acgacatgga gcgctaatct ctgggcgtcg cctaagctgc aatctgagcc
      241 gacagctgct cagagtggaa agcgggcatg ccgccgagaa agggactgcc gcagaattgg
      301 gggtctgcca ccgaaaacgg gtatgctctg gctcgttttc cccgctgagg tagtgccgac
      361 gtggcctgga tcgtgagact ggtgagtgtc gaggccgacg ggacggagca cagcgccgac
      421 gtcctgcaaa tctccaggcc cgagatcctc gccgacctgg ccagcctggg gctgaccttg
      481 gccgagagca agcagctcct ggccggcgtg cagcaggaga tcgtcgccgc gcaggcccga
      541 cttcatgccg cgctccgccc ggagtgccgg cactgcggcg ccacttgccg gatgaaggac
      601 tatcgtcagc acgagattgc aacactgttc ggccaagtga cggtccggct gccccgtttc
      661 cgctgtgccg gatgcggtac caccgaggct ggcgtggact ggccgccacg tgtccgctcg
      721 gctccggagc tggaccggct gcgcgcccaa ctctctgcac tgctgaccta ccggaccgcg
      781 gctgacctgc tcagccagat gttcccggtc gatgcgggca tggatccgga gagcttgcgc
      841 cgccacacct tcaaggtcgc cgagactttg ccgatacgac ccgcaaccga gacgcccgtg
      901 agtgccggtg tcgagacggt cacgttgacc ttggatgcga cctttgtccg cagttgtgag
      961 gacggcgagc ggcacctgga ggtccggatc ggtaatgtcg agacggaggc aggaggaagg
     1021 caggtctttg gtgcagttgc aaagaccgac accgatctc
//
LOCUS       DASRPQ010002170         1140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3068747, whole genome shotgun sequence.
ACCESSION   DASRPQ010002170 DASRPQ010000000
VERSION     DASRPQ010002170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1140
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3068747"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          188 a          330 c          399 g          223 t
ORIGIN      
        1 gagcctttgg gaatcactcg cttgatcaac gctgcctcgg cgggttccag gcgcacgttg
       61 agctggactg aggcccggcg gttcttgttc tctgccatgg cgtccctccg tggggctatc
      121 caccgttggc aagaatcgtg ccgtatcagg gcccaagcgg ccggtaaccg ggcaatcgcc
      181 ggcgtgtcgg ccgcgccgag gcagggtgcc ggtaagaacg gcgccgggaa ccgcagacgg
      241 gggcatgcgg gctcggccga cttccccata gcgacctgct atgacaactt gtcatccgtc
      301 agggaatgcc agttaaacgg taattcgccg ctcgggtaat cgtgcaatat tcgaccctga
      361 ctaaagttag atactgaagt ctgagcaaag atgcgatacg gtcggcggcc tgggcgaggc
      421 ggcggaccgt tcccatgatc cggacgctat cggaggtgac ggctaccgtt catcaccgtc
      481 cgaacggaca ttactactta gagtccgctg gctgacggat gtctctcgct gcaatcgaca
      541 acagaattgg ccgtacctcc gtcttacgga agtgcgactc ctccgtacct ccgtaagacg
      601 gatcacgttt tgtctccatg cccggcttgt cgagcagccg ggccaggatt gttcttttta
      661 cagctgggct catcggggat ggtcgcgtgc gcgtgaaatc ttcggcccgt gcgggcaggc
      721 ggctggcgca ggttacaccc ggctacggtg cggcgttcag ggtccgtgcg ggctcctggc
      781 ggggttggat agtggcgggc tgcccgtgac gccggcaggt ttgtgggatc tgagcccgtt
      841 ttacagcctg gccgctggga cttgcccccg agggtcgctt tctgctgccg tgagcgcgct
      901 ggtcagactt cggcttgcgt gagcctgctg acctggtccc cgggcagccc gcctgtcatt
      961 acccgaggtc gaggataagg ggacgtggtg gccgcgcgga agcagaagca gaggcgcatg
     1021 agcgcgcagg tggtggagga cgaggactac cagctgcgct atgagatcgc cgcggggatc
     1081 gacgtggcga aggagtccgc ggtcgtgtgc gtccggatgc ccccggcggc ggggaggaag
//
LOCUS       DASRPQ010002171         1128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4319336, whole genome shotgun sequence.
ACCESSION   DASRPQ010002171 DASRPQ010000000
VERSION     DASRPQ010002171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4319336"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1062
                     /locus_tag="VFD73_24560"
     CDS             <1..1062
                     /locus_tag="VFD73_24560"
                     /inference="COORDINATES: protein motif:HMM:NF012457.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HZI77148.1"
                     /translation="LDFYRALVDGLLENNIQPLITLFHWDLPVALEDRGGWLNPDIAD
                     WFAEYAQVCYRALDDRVDLWTTLNEPWVVTDGGYLHGALAPGHRNLFETPIASHNLLR
                     AHASAVEAYRAEGQHQIGIVVNIEPKYPASDKPEDLEATARADAYMNRQYLDPIFFGT
                     YPTEMKEIFGEAWPDFPAEDMEHIRRPLDFLGINYYTRSVTCHNPDAKPVQAGRVRQR
                     QATHTETDWEVYPQGLADTLLGIRQRYGNIPLYITENGAAFYDPPTVEGEVNDPLRVD
                     YFREHLKVARRVIREGVDLRGYFAWSLLDNFEWSLGYSKRFGIIHVDYATQRRTPKAS
                     AKFYAEVIKTRGSVLGSLD"
BASE COUNT          229 a          369 c          342 g          188 t
ORIGIN      
        1 ctcgacttct accgcgccct ggtggacggc cttctggaaa acaacatcca gccgctgatc
       61 actcttttcc attgggatct gccggtggcg ctggaggatc gtggaggctg gctgaacccg
      121 gacatcgcgg actggttcgc ggagtacgcg caggtctgtt atcgagcgct ggacgaccgc
      181 gtggatctct ggaccaccct gaacgagccc tgggtggtga ccgacggcgg ctatcttcat
      241 ggcgcgttgg cgcctggtca tcgaaacctt ttcgaaacgc cgatcgcctc gcacaacctc
      301 ctgcgcgcgc acgcctcggc cgtggaagcc taccgcgcgg aaggccagca ccagatcggc
      361 atcgtggtga acatcgagcc caaatatccg gcctcggaca agcccgagga cctggaagcc
      421 acggcccggg ccgacgccta catgaaccgc cagtacctgg acccgatctt cttcggcacc
      481 tatcccaccg aaatgaaaga gatcttcgga gaggcctggc ccgactttcc agccgaggac
      541 atggagcaca tccgccgtcc gctcgatttc ctcggcatca actactacac gcgtagcgtg
      601 acctgtcaca atcccgacgc caagccggtc caggctggcc gcgtaaggca gcgccaggcc
      661 acccacaccg agaccgactg ggaggtctat ccccagggcc tcgcggacac cctccttgga
      721 atccgccagc gctatggcaa tattccgctc tacatcaccg aaaacggtgc ggccttctac
      781 gatccgccga ccgtggaagg agaggtcaac gatccgttgc gggtcgatta cttcagagag
      841 cacctcaagg tggcaaggcg tgtgatccgg gaaggagtgg acctgagggg ctacttcgcc
      901 tggtcgctcc tggacaactt cgaatggagc ctgggctact cgaagcgctt cggcatcatc
      961 cacgtggact acgcgaccca acgccgcacc ccgaaggcga gcgcgaagtt ctacgccgag
     1021 gtgatcaaga cgcggggcag tgtgctgggg tcgttggact gagcaggcat caatgatccg
     1081 gcccaacggg ccggcagaac caagcccagg gctgaggccg aaggccga
//
LOCUS       DASRPQ010002172         1066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1846448, whole genome shotgun sequence.
ACCESSION   DASRPQ010002172 DASRPQ010000000
VERSION     DASRPQ010002172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1846448"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..231)
                     /locus_tag="VFD73_24565"
     CDS             complement(<1..231)
                     /locus_tag="VFD73_24565"
                     /inference="COORDINATES: protein motif:HMM:NF013570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase-related protein"
                     /protein_id="HZI77149.1"
                     /translation="MDSGTIRRLFLDFFVARGHREVPSSSLVPADDPTLLFTNAGMVQ
                     FKRVFLGQEQREYVRATTCQKCVRAGGKHNDLE"
     gene            complement(359..991)
                     /locus_tag="VFD73_24570"
     CDS             complement(359..991)
                     /locus_tag="VFD73_24570"
                     /inference="COORDINATES: protein motif:HMM:NF014668.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RecX family transcriptional regulator"
                     /protein_id="HZI77150.1"
                     /translation="MTPLARITALEVDLRRPGAVRLEIDGTRFGAVDREVAGREALAV
                     GKEVDSALLERLSAAADVEAAYRTLLRALQVRSYAKGDVSRRLQRKGHPRAAVTAAVE
                     RATELGLLDDAEFARQYVETRAARGRGPSRLTRDLLSMGVERAQIEQALTAHWPEGSD
                     RTGVPLALAQKRAAQLGSLPRQAKRRRVVAYLARRGFTGRDITELVDKVV"
BASE COUNT          182 a          363 c          341 g          180 t
ORIGIN      
        1 ctccagatcg ttatgcttgc cccccgcccg gacgcatttc tgacaggtgg ttgctcgcac
       61 gtactcgcgc tgctcctgcc ccaggaagac ccgcttgaac tgcaccatgc ccgcgttggt
      121 gaacaggaga gtgggatcgt ctgcaggtac cagtgacgaa gaaggcacct cacggtgccc
      181 ccgagcgacg aagaagtcga ggaaaagacg acgaatggtt ccggagtcca tccggaaaaa
      241 tataggcgga gtggctgggg ctggggagcg gctgtggagg tccagtcgtg agtggcgagt
      301 ggtaactcag gtgaactgat cgagagcgct ttgagccact cgatctgact gccccgccct
      361 aaacgacttt atcgaccagc tcggtgatat cgcggccggt gaaccctcgg cgggccagat
      421 aggccaccac tcgccgccgt ttggcttgcc gcggcagcga gccgagctga gccgctcgct
      481 tctgggccag cgcgagcggc actccggtgc ggtcgctgcc ttcgggccag tgcgcggtaa
      541 gcgcttgctc gatctgggca cgctcgaccc ccatcgaaag cagatctcga gtgagccggg
      601 acggtcctcg gccccgggct gcacgggttt ctacatactg ccgcgcgaac tcagcatcgt
      661 cgagcagccc caactctgtc gcgcgctcta ccgcggctgt gaccgccgcg cggggatggc
      721 cctttcgctg caaccgccgg ctcacatcgc ctttggcata ggagcggacc tggagcgcgc
      781 gaagcagcgt ccggtaggct gcttccacgt cggctgccgc ggagagccgc tcgagcaacg
      841 ccgaatcgac ctccttgccg acggccaacg cttccctgcc ggcgacctcg cgatcgacgg
      901 caccgaaacg ggtgccgtcg atttccagcc gcacggcccc gggccgccgg agatccactt
      961 ccagagccgt gattcgggca agcggagtca ccgatcagtc gtcccctgca tcgccattgg
     1021 cgacggcggc tccggctccc acctccactg ttccccgcat gccgag
//
LOCUS       DASRPQ010002173         2327 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2796280, whole genome shotgun sequence.
ACCESSION   DASRPQ010002173 DASRPQ010000000
VERSION     DASRPQ010002173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2327
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2796280"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..524)
                     /locus_tag="VFD73_24575"
     CDS             complement(<1..524)
                     /locus_tag="VFD73_24575"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HZI77151.1"
                     /translation="MSRQFGISTTAIHGIPHRRADWTPVAPAVQQSSTFTNPVGKDDD
                     ILYSRYGNNPNQLALAAKYALLEGAEDAIFVASGMGATALAHLAVLRPGDHLIASSWI
                     YGGTQHLFDQELARFGIEVTYVSPDHPRQWRKAVRKSTRAIFVETPTNPLMRIIDLSP
                     IAYVAEEEGLALLV"
     gene            complement(521..1057)
                     /locus_tag="VFD73_24580"
     CDS             complement(521..1057)
                     /locus_tag="VFD73_24580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77152.1"
                     /translation="MIQTIRIGQLLREAVTAPYRNLVTRPTGAAVRTRIEETLARSNC
                     RTALLDFSEIELVDLSCADEVVAKLLLDGSSAYFFVLQGLREDHHEAIDHVLTHHRLA
                     IASLPPGRGEFRLLGWVPADARAAFSCICQRGPLTLAALAGVLGWVESRSREAVRQLV
                     LHRLVRPSGDLFYPLPTA"
     gene            complement(1054..1956)
                     /locus_tag="VFD73_24585"
     CDS             complement(1054..1956)
                     /locus_tag="VFD73_24585"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI77153.1"
                     /translation="MTRVVEVPAHFDDRAFDGFAEGVGEWPPEGRLLFDARATQWASP
                     YGLIGLLTAGQALAEARRERPLLTVPTSDEVKRYWARAGFFQQAADLFELHGKVPRAA
                     TTGPSDVLLDVTPVRASEDVHSVVDKISESASRILHGELGLEMKATLRFSMALSEACQ
                     NIVEHAGTSGWVAVQAYTFRRRLGRRVVVIAVSDAGVGFRRSLESTHAKRFGERWGDG
                     AALEAALIQGVSRFRDPGRGQGLAFIKRFLDQWEGKISIRSGTARLSIVPPWDEDVPL
                     SERLPFFPGSQVQIIIPAQEPERR"
     gene            complement(1953..>2327)
                     /locus_tag="VFD73_24590"
     CDS             complement(1953..>2327)
                     /locus_tag="VFD73_24590"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HZI77154.1"
                     /translation="LTPDPLSLAAQAIGAGVSLLTVTLGPRGVVYVAAPGFDGLGGQR
                     GRRNAAPLAVRTALVPAPQAEALDPTGCGDVFGAVAFARLLAGDSVESALRHAATLAA
                     RNAAFRGATGLSRHLRGELVTP"
BASE COUNT          440 a          781 c          758 g          348 t
ORIGIN      
        1 tccaccagca gggccagtcc ttcctcctcc gccacgtagg caatggggga gaggtcgatg
       61 atccgcatga gtgggttggt cggcgtctcc acaaagatgg cccgggtaga cttccggact
      121 gccttacgcc actgccgcgg atgatcggga ctgacatacg tcacctcgat cccgaagcgg
      181 gccagttcct gatcgaagag gtgctgcgtg cccccgtaaa tccacgagct cgcgatgagg
      241 tggtcacctg gccggaggac ggcaagatga gccagtgccg tcgcccccat gccactggcg
      301 acgaagatgg cgtcctcggc cccctccagc agcgcgtact tcgccgctag cgccagctga
      361 ttggggttgt tgccgtaccg gctgtagagg atatcgtcgt ccttgccaac cggattggtg
      421 aacgtgctgc tctgctggac ggccggagcg acgggtgtcc agtcggcccg ccggtgaggg
      481 atgccgtgaa ttgcggtggt ggagattccg aactgccggc tcatgccgta ggcaagggat
      541 aaaacagatc gcccgagggc cggaccagcc ggtgaagcac cagctggcgc accgcctcac
      601 ggctcctgga ttccacccag ccaagcacgc cggccagggc agccagggtc aagggaccac
      661 gctgacagat acagctgaac gcggcgcggg cgtcggcagg cacccaccct aagagccgaa
      721 actcgcctct cccgggcggc agtgatgcga tcgcgagccg gtgatgcgtc aacacgtgat
      781 cgattgcctc atgatggtct tcccgcagtc cttgcaagac gaagaagtac gcgctgctgc
      841 cgtcgagcag gagcttggcg acgacctcat cggcacaact caggtccacc aactcgatct
      901 cggaaaaatc cagcagggca gtgcgacagt tggagcgggc cagggtctct tcgatccggg
      961 tgcggaccgc agcgccggtg ggccgggtca cgagattccg atatggggcg gtgactgcct
     1021 cgcgcagcaa ttggccgatg cggatcgtct gaatcaccgg cgctccggtt cctgggctgg
     1081 gatgatgatc tggacttgcg accccggaaa gaacggcaag cgctcggaga ggggaacatc
     1141 ttcatcccag ggcggaacaa tcgagaggcg agccgtgccg ctgcggatcg aaatcttccc
     1201 ctcccactga tcgagaaatc gcttgatgaa tgcgagaccc tgcccccgtc cggggtcgcg
     1261 gaagcggctg acgccctgaa tcagcgcggc ctccagtgcc gcgccatcgc cccagcgctc
     1321 gccaaagcgc ttggcgtgcg tactctccag ggaacggcgg aagccgaccc ccgcatcgct
     1381 cacggcaatc actacgactc ggcggcccag acggcgccga aaggtatagg cctggaccgc
     1441 aacccagccg ctggtgccgg cgtgctccac aatattctgg caggcctccg aaagcgccat
     1501 actgaatcgg agcgtggcct tcatctccaa cccgagctcg ccgtgaagaa tgcgagaggc
     1561 gctctcggag attttgtcca ccacactgtg aacatcctcc gaggcgcgga ccggcgtcac
     1621 atcgagcagc acgtcagagg ggccggtggt cgcggcgcgc ggcactttgc cgtgcagctc
     1681 gaacaggtct gccgcctgtt gaaaaaaccc ggcccgggcc caatagcgtt tcacctcgtc
     1741 cgacgtgggc accgtcagca gcggtcgttc ccgccgggcc tccgccagcg cctgccccgc
     1801 cgtcaacaat ccgatcaaac cgtagggcga tgcccactgc gtggcccggg catcgaagag
     1861 cagcctcccc tccggcggcc attcacccac tccctcggca aagccgtcga acgctcgatc
     1921 gtcgaaatgc gccggcacct cgaccacgcg agtcatgggg tcaccagctc accgcggaga
     1981 tgacgggaga gcccagtcgc accccggaat gcggcgttcc gcgccgcgag agtggccgca
     2041 tggcgcaatg ccgattccac ggaatcgccg gcgaggagcc gggcgaaggc gacagcccca
     2101 aaaacgtcac cacagccggt cgggtcgagc gcttcggcct gcggtgccgg cacgagtgcg
     2161 gtgcgcacgg caagcggcgc agcgttccgg cggccccgct gcccgcccaa tccatcgaac
     2221 ccgggcgccg caacgtagac gactccgcga gggcccaggg tgacggtcag aagcgacacg
     2281 ccggcgccga tcgcctgggc agcgaggctc aagggatcag gcgtgag
//
LOCUS       DASRPQ010002174         1082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3423667, whole genome shotgun sequence.
ACCESSION   DASRPQ010002174 DASRPQ010000000
VERSION     DASRPQ010002174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3423667"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            88..690
                     /locus_tag="VFD73_24595"
     CDS             88..690
                     /locus_tag="VFD73_24595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77155.1"
                     /translation="MTDQVVVQEWQPFFMALAGVSAALAGLVFVAMSLHPWPILSHPI
                     MRARAFAAAFGFLLGVAWALIMLLPAGTSPAGSVLLITVGIGESLVIGYRQLQARTAG
                     MNIALVVLADLLMPAPLLAGIVGLLQPHSAFPFLLLAITAGVGLFLLFFQSWTLVVHS
                     VLSTEDASRPAPGWVARAHGSDDDHPTMHAGDASTEAGSV"
BASE COUNT          165 a          343 c          370 g          204 t
ORIGIN      
        1 ctggttcgga cagcgagcca ggtggtgctg ggcgggaaca ggcgctctgg gcaataagct
       61 ggcgggtttg tcggtgagtg agcgagaatg actgatcaag tcgtcgtgca ggaatggcag
      121 ccgttcttca tggccctggc gggcgtctcg gcggcgctgg cgggcctcgt gtttgtcgcc
      181 atgtcgctgc atccttggcc gatcctcagc caccccatta tgcgtgcgcg tgccttcgct
      241 gccgccttcg gctttctgct gggggtcgcc tgggcgctca tcatgctgct gccggccggc
      301 acgtcgcctg ccggcagcgt cctgctcatc accgtgggga tcggggagag cttggtcatc
      361 ggctaccgac agctccaggc gcgcaccgcc ggcatgaaca tcgcgctcgt tgtcctcgcg
      421 gacctgctca tgccggctcc gctcctagca ggcattgtcg ggttgctcca gccccattcc
      481 gccttcccct tcctgctcct ggccatcacg gctggcgtgg gactgtttct cctctttttc
      541 cagtcgtgga cattggtggt acatagcgtt ctgagcacag aggacgcatc acgcccagcg
      601 ccaggatggg tggcgcgtgc tcatggctcg gacgacgacc acccaaccat gcatgcgggc
      661 gatgccagca cggaggcagg atcggtctga cgggcactgg ctgaagcgac gactcacgcc
      721 ggcgcgcgcc atgtctacca gagaaggtaa cgcagcggcg ggatagcctg ctacgggcca
      781 acgctcacga ccggtatgtc agcgttgcct ccccatttgc tatggacggg ctggcacagg
      841 ctatgcatta cccccaggtt gaaccgccca tcgcgtcgag gcgcaggtcg cgcgggctgt
      901 atcggcgggt ggcctcgcac gagacgaggc gaaggaggag caatcatggc aatggatcca
      961 acggacccgg cgtatccagt tgagccggtg cagtcgaccg ggccagatcg gcccgtcgag
     1021 ccgatgggtg tggacgagcc ggtgggcgct gtgcagcgcc cgcagtacgt ggagcgcgac
     1081 cg
//
LOCUS       DASRPQ010002175         1047 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3724168, whole genome shotgun sequence.
ACCESSION   DASRPQ010002175 DASRPQ010000000
VERSION     DASRPQ010002175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3724168"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            257..529
                     /locus_tag="VFD73_24600"
     CDS             257..529
                     /locus_tag="VFD73_24600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77156.1"
                     /translation="MTKTLITTALALGLGLLSTPSFAAGSYIVNGHAASPAEAQHLVT
                     SGVQQGAWVVNGYGIAPAERTSLTAPASTEPRGQKCYYVLDVLLCD"
BASE COUNT          182 a          327 c          340 g          198 t
ORIGIN      
        1 agctcgtccg ggccttggtt tggtcggctg agggccccag gggatggtct tcgaggccgc
       61 agcaccttcc cacaacggac acgcaagcga cttgggtagg acgcgcttaa cgctgcagtg
      121 acatgagccg cgggctcggc acctgaagcg gcgctcgctg tgaaatgctg cactgaagca
      181 cttcagcgcc acagggccat ccggccggca tggtccgtcg cgtcagcagc tgctgacgcg
      241 aatgggggaa ccggccatga cgaagacctt gatcaccacc gctctggcac tgggcctcgg
      301 tcttctcagc acccccagct tcgccgccgg cagctatatc gttaatggcc acgccgcctc
      361 tccggccgag gcgcagcacc tggtcaccag cggcgtccag cagggtgcct gggtggtcaa
      421 cgggtatggc atcgcgccag ccgagcgcac gtccctcacc gctccggctt cgaccgaacc
      481 ccgcggtcag aagtgctact acgtcctcga cgtgctgctc tgcgattgac gcggaagccc
      541 gagcaattcc gaaaaatgtc cggcgatctt atctgtggcg tccaggccaa gtgcggatca
      601 tgcaaggcac cgcgacttcg gtcttctagc aatgtcgatg atgaccagga gttggtttcc
      661 atgtcggaag gccggcccct gtgacgtcct cggatttgaa tggtcagacg gctgagaagg
      721 gagaacacga tgcttgcact agcgatcgct atgggcaccg tggtgtgggc gatgatcggc
      781 tatgcgctgc tcagcccgga cccgccagct cccgagggtg ctgactagtc tcttatgttc
      841 ccggtcaagc ggggaaggcg tgattgtgcg cctgccaggc tcgttgcgtg gcagtggttc
      901 atcgatgcgg ctgcacaggg ctggagatgg ggcggtagac gacggttgat caggctctta
      961 tccgcgggtt gggtaccgca ctccgtattt cgtcccccca ccgtggcccc atccccggcg
     1021 ctgtgcagcg agaagaaagg gccgcta
//
LOCUS       DASRPQ010002176         1036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3423758, whole genome shotgun sequence.
ACCESSION   DASRPQ010002176 DASRPQ010000000
VERSION     DASRPQ010002176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3423758"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..658)
                     /locus_tag="VFD73_24605"
     CDS             complement(<1..658)
                     /locus_tag="VFD73_24605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77157.1"
                     /translation="MLASIYPVLVLTDRTPPEWIRPAELILPLALSLLAFLVFLGVAV
                     LMTGDRSKRALIALCGILAFTNYGAAWQVLYDHTPTAEPQAIDLKLLPLLLLFLFLFW
                     LLILRSTFSLEGACRYLNAFWGFLVAFTVPGLFPRLVQHQTPLLHASSPPAALHAHLA
                     TIHSRPDIYLIILDKYTGLRSLQNNFAFDNSPFLKYLESRGFFVPRESRSNYSQTFLA
                     L"
     regulatory      complement(940..>1036)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
BASE COUNT          223 a          280 c          344 g          189 t
ORIGIN      
        1 cgagggcaag gaacgtttgg ctgtagttcg aacgactctc gcgaggcacg aagaacccac
       61 ggctctccag atatttcagg aaaggggagt tgtcgaaggc gaaattattc tgcagtgagc
      121 ggagcccggt gtacttgtcg aggattatga ggtagatgtc gggacgcgag tggatcgttg
      181 ctagatgagc gtggagcgcc gcgggcgggg atgaggcgtg gagcagcgga gtttggtgct
      241 gcaccaggcg gggaaacaac cccggaacgg taaaggcgac cagaaaaccc cagaacgcgt
      301 tcagataccg gcaagccccc tccagtgaga acgtgcttct caggatgagc aaccagaaga
      361 gaaagagaaa aagtaagagg agtggcagca gcttcaggtc gattgcctgt ggctctgccg
      421 taggagtgtg gtcgtagagt acctgccacg cggccccgta gttggtgaac gccagtatcc
      481 cgcagagcgc tatcagggca cgctttgagc gatccccggt catcaagacc gccactccga
      541 gaaacaccag aaaagccagg agagaaagtg cgaggggcag aatgagctcc gctggacgga
      601 tccactccgg cggagttcgg tcggtcagca ccagcaccgg gtagatgctg gccagcatcg
      661 ggaatacgta cctgccgcga gggctcatgg ggtgatgtag atgctcgatc tgggcccgtt
      721 tacgccggga agtggcgtgg gtatctcgcc aatgaaagta gctttcgggt taccgagttg
      781 gacagtgctt gcctcgccga gagtcggtgg atgaggtggg cggccgttcg gatcatcctc
      841 gaccggccgg caccccggta ccagcatcgc ccctattacc acagcaagca caaattccag
      901 actccacggg ctcgagaaca ccacccctcc tgtggttcgt tcggcagccc gactagcctg
      961 gcctggcgca ttagtgcgcc gtgggcggta gcctcctggc tttgcgtccc cgcctttcgg
     1021 cgggtttgcc tttgtc
//
LOCUS       DASRPQ010002177         4077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4319645, whole genome shotgun sequence.
ACCESSION   DASRPQ010002177 DASRPQ010000000
VERSION     DASRPQ010002177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4077
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4319645"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..663)
                     /locus_tag="VFD73_24610"
     CDS             complement(<1..663)
                     /locus_tag="VFD73_24610"
                     /inference="COORDINATES: protein motif:HMM:NF012509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77158.1"
                     /translation="MTQVTVAALAKINLFLRVLSRDAEGYHGLETLLCLISLADTIRA
                     ERRAGRGVTIEVIGADVGPAADNLAVRAASRVLQATGERFAVHLQLEKRIPSRAGLGG
                     GSSDAAATLHAVNALAGNVVPRHELLQFAAQLGSDVPFFVTGAPLALAWNRGERMIRL
                     PPLPPHQALLVTPQVPIATADAFRWVDQTAQPSGRKGSVALDLAALSTWGDIGRMAGN
                     DFE"
     gene            complement(660..1769)
                     /locus_tag="VFD73_24615"
     CDS             complement(660..1769)
                     /locus_tag="VFD73_24615"
                     /inference="COORDINATES: protein motif:HMM:TIGR00374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HZI77159.1"
                     /translation="MSSSGMPPSNHFSHSSRSCSTWSPWRLPNPERSGAGRARHALPA
                     LVGIVLSLALLAWAARGVRLDEVWRQIRAAHPVPLAIAVILATLTFPLRLIRWRVLLP
                     DEDGSPYPVRPLWHAVALGFMANNLLPLRAGELVRTYTAARLAKIRFSTVLSSIGVER
                     IFDALTVVALLSAALLYADLPPALTIGGASVARLTKAAGLVGCAALLAGVLVLAAPLQ
                     AERVVRALIRQARLSDMVVGFIEGIRQGLVVLRSPGRLLLVIFWSFVLWSVNALAFFV
                     AFGAFDIHVSYWGALLMQGLLVLGISIPSTPGFFGPFEAVIVAVLALYAIPHDQAFSY
                     AVSYHVTSFLPITILGLWSLARTPGGFRRLRAQEP"
     gene            complement(1678..3327)
                     /locus_tag="VFD73_24620"
     CDS             complement(1678..3327)
                     /locus_tag="VFD73_24620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77160.1"
                     /translation="MNNPLGTADFFALEAGESLDRIEQMVSGPTAPPPEELLRMARVL
                     RGSALMAGQVAIARAAGSLEGLARSLRDHRRPWDAATRELVAQAVEEFRLLVRRTREW
                     NDADTERAARLGRDLDQLVGGETSIGQTPPSPVQPKELSSGVRAFVAREGALIASALD
                     RAAKSLRSSPADREPLYNVIRRMQSLRGLAELGDLAPLADILDGIEFAVGDLTRLFAP
                     PPGVDEVMDAAAQALSRISRDVAERGRPDSEAEEASRFTELLLRAFAVERDVVPIESL
                     YYADDPEPFSHPAAQPQFTTPAPLGPLELVSHGEHLCQSADLIEAATSAIQRDLRLYH
                     LLGTLRTAASPSSDAVAGALGIFARSAQEALAAGVASRSVEGLVTRLREAGQLLRSTV
                     ESDDRMLISRRLLDVAHRLDELRASAGTDLVVPIESLGYDADLDVVPIESLAPTAPAP
                     SGLERTFQTFDRLRKARAPVTPAFAAMLGTGATEKPAPEPDEAAVPIGTLCYRGQAAL
                     QRADAVRQQIVHELKRDASLQSLQPLLEELLDLVPLALAES"
     gene            complement(3409..>4077)
                     /locus_tag="VFD73_24625"
     CDS             complement(3409..>4077)
                     /locus_tag="VFD73_24625"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: protein motif:HMM:NF003625.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HZI77161.1"
                     /translation="EPDPVAAALLCQTAGVDGITAHLREDRRHIQDRDVERLAAAVRV
                     FNLELASSREIIDLACRLRPHQATLVPERREEVTTEGGLDLEASWKPLRETVTKLSDA
                     GIRVSLFIDPEPRTIEAAHRLAVPAIELHTGRYANTWQVDDTALDELRSGAKQAADLG
                     LSVHAGHGLTVRNVKPVSAIQEIEELNIGHSIVSRAVMIGMQQAVLEMRTAMNQGRGL
                     QPDG"
BASE COUNT          780 a         1283 c         1354 g          660 t
ORIGIN      
        1 ctcgaagtcg tttccagcca tccgtcctat gtctccccag gttgagagtg ccgccagatc
       61 caacgcgacc gaaccctttc tgccggatgg ttgggcggtc tggtcgaccc accgaaaagc
      121 atccgcagtg gcaatgggaa cctgtggggt gaccagcagt gcctgatgcg gcggcagcgg
      181 aggaagccgg atcatccgct cgccccgatt ccaggcgagt gccaatggcg cgccggtcac
      241 gaaaaatggg acgtcgctgc cgagctgggc ggcgaactga agcagctcgt gtcgaggcac
      301 cacattgccg gcgagggcgt tgacggcatg cagcgtggcg gcggcatcgc tggatcctcc
      361 gcccagcccg gcgcgagagg gaatccgttt ttccagctgg aggtgcacgg caaaacgctc
      421 acccgtggcc tggagcactc gactcgcggc ccgcaccgcg aggttgtcgg ctgcaggtcc
      481 aacgtctgct ccaattacct cgatcgttac tccacgtcct gctcgccgct cggcccggat
      541 cgtgtcggca aggctgatga ggcacagcaa agtctccaac ccatgatacc cttcggcgtc
      601 ccgggacagc acccggagga acaggttgat ctttgccagt gctgccacgg taacctgagt
      661 catggctcct gagctcggag tcggcgaaac ccgccgggag tacgggccag tgaccagagc
      721 cccaggatgg tgatggggag gaacgaggtg acgtgatagg acacggcgta ggaaaacgcc
      781 tggtcgtgcg gaatcgcata gagggctagc acggcgacga tcaccgcttc aaatgggcca
      841 aagaatcccg gtgtcgacgg tatggagatg ccaagcacca gaagaccctg catcaggagt
      901 gctccccaat aactcacgtg aatgtcgaat gccccaaacg cgacgaagaa cgcgagcgca
      961 ttcacgctcc acaggacgaa ggaccagaag atgacgagca gcaagcgacc cggtgaccgg
     1021 agcactacca gaccctgtcg gattccctcg ataaatccca cgaccatgtc cgaaagacga
     1081 gcttgccgga tcagagcccg tactactcgc tcggcctgga gcggggcggc cagcaccagg
     1141 acacctgcca acagggcggc gcatccgacc aggcccgcag ctttcgtcag ccgggccaca
     1201 gatgctcccc cgatggtcaa ggccggcggg agatcggcgt acagcagcgc ggcggatagc
     1261 aatgccacca cggtgagcgc atcaaaaatg cgttccacgc caatcgagga gagcacggtg
     1321 ctgaagcgga tcttcgctaa gcgcgcggcg gtgtaggtgc ggaccagctc tccggcacgg
     1381 agcggcaaga gattgttcgc catgaagccc agcgccactg catgccacag cgggcgaaca
     1441 gggtaggggg aaccgtcttc atcaggcagg aggactcgcc agcgaatcag ccggagcgga
     1501 aacgtcaagg tggcgaggat gactgcgatg gcaagcggga cgggatgcgc ggcgcgaatc
     1561 tggcgccaca cttcatccag ccgaacaccc cgggctgccc acgccaacag ggcaagagag
     1621 agaacaattc cgactaacgc gggaagcgca tggcgagctc ggccggcgcc gctccgctca
     1681 ggattcggca agcgccaagg ggaccaggtc gagcaactcc tcgaggagtg gctgaagtga
     1741 ttggagggag gcatcccgct tgagctcatg gacaatctgc tggcgcacgg cgtcggctcg
     1801 ctgcagggca gcctggccgc ggtagcagag ggtgccaatc gggaccgccg cttcgtcagg
     1861 ctccggcgca ggtttctcgg ttgccccggt gcccagcatc gccgcgaatg ccggagtcac
     1921 cggagcgcgc gccttcctca ggcgatcgaa tgtttgaaag gtgcgctcga ggccactcgg
     1981 cgccggtgcc gtaggagcca ggctctcgat cggtacgacg tcgaggtcgg cgtcgtatcc
     2041 cagcgactcg atgggcacca ccaaatccgt gccggccgat gcccgaagct cgtccagtcg
     2101 gtgggccacg tcgagcaaac gccgcgagat gagcatgcgg tcatcgctct ccaccgtact
     2161 ccgcaggagc tggccggcct ctcgcaggcg agtcaccagt ccctcgaccg agcgagacgc
     2221 gacgccggct gccagggctt cctgcgcgga gcgcgcaaaa atgccgagcg cgccggcgac
     2281 cgcatcagag cttggcgacg cggcggtgcg cagggtgccg agcagatgat acagccggag
     2341 gtctcgctgg atcgccgagg tggcggcttc gatgagatcg gcgctctgac aaaggtgttc
     2401 gccgtggctc accagctcga gcggtccgag cggcgcgggc gtggtgaact gcggctgtgc
     2461 ggcagggtgg ctgaacggct cagggtcgtc ggcgtaatac agtgactcga tggggaccac
     2521 atcgcgctcg acggcaaagg cccgcaggag cagctcggtg aaccgactgg cttcctccgc
     2581 ctccgagtcg ggacggcccc gctccgccac gtcacgggag attcggctga gtgcctgagc
     2641 ggccgcgtcc atgacttcat ccactcccgg cgggggcgca aacaaacggg tgaggtctcc
     2701 caccgcgaac tcgatcccat cgagaatatc cgccagcggc gccagatcac ccagctcggc
     2761 cagcccgcga agcgactgca tcctgcggat gacgttgtag agcggctcgc ggtcggcggg
     2821 tgaggaacgg agagattttg cggcccggtc gagcgcgctt gcaatgagag caccttcgcg
     2881 ggcaacgaag gcccgaacgc cgctgctcag ctccttgggt tgtactggag aggggggagt
     2941 ctgtcctatc gaagtctcgc cgccaaccag ctgatccagg tctcggccga ggcgagctgc
     3001 gcgttcggtg tcggcgtcat tccattcccg ggtgcgacga accaggaggc ggaactcttc
     3061 caccgcctgc gccaccagtt cgcgggtggc cgcatcccag ggccgacggt ggtcgcggag
     3121 actccgcgcc agtccctcga ggcttcccgc ggccctggcg atcgccacct gtcccgccat
     3181 caatgccgat ccgcgaagaa cgcgggccat ccggaggagc tcttccggcg ggggtgcggt
     3241 cgggccgctc accatctgct cgattcgatc caggctttcc ccggcttcga gtgcgaagaa
     3301 atcagcggta ccaagcgggt tgttcatcgg gatccaggcc aggagccgaa gctcgtcgtc
     3361 cagcggggtc gggggtggaa ggtatgaagc cgatggcgag gcatcaacct atccatcagg
     3421 ttggagaccg cggccttgat tcatcgcagt tcgcatctcc agcactgcct gctgcatacc
     3481 tatcatgaca gcgcggctta cgatgctgtg gccgatattg agctcttcaa tctcctgaat
     3541 tgccgacacc ggcttcacgt tgcgaaccgt caacccgtga ccggcatgga ccgataatcc
     3601 gagatcggca gcttgcttcg caccggagcg aagttcgtcc agtgcagtat cgtccacttg
     3661 ccaggtattg gcataccgcc cggtgtggag ctcgatagcg ggaacggcga gtcggtgtgc
     3721 cgcttcgatg gttcgcggtt cgggatcgat gaacaggctc actcgaatgc cggcgtcgct
     3781 tagtttggta acggtttcgc ggagcggttt ccaggaggcc tcgaggtcca gacccccttc
     3841 agtggtaact tcttcgcgac gctccggaac cagagttgct tgatggggcc gaagtcggca
     3901 tgccagatcg atgatttccc ggctgctggc aagctcgaga ttgaacactc taaccgccgc
     3961 agcgagacgt tcgacgtccc ggtcctggat gtgccgccgg tcctctcgga gatgagcggt
     4021 aatgccgtcc acgccggctg tctggcacag cagggctgcg gcaaccggat cgggctc
//
LOCUS       DASRPQ010002178         2358 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4319793, whole genome shotgun sequence.
ACCESSION   DASRPQ010002178 DASRPQ010000000
VERSION     DASRPQ010002178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2358
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4319793"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..393
                     /locus_tag="VFD73_24630"
     CDS             <1..393
                     /locus_tag="VFD73_24630"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HZI77162.1"
                     /translation="DGGLDSLSHYAGHPILINFWASWCTPCRSEMPFLITAYQNHQGE
                     RLTVLAIDLKDQEGSTKDVSKFVSEFRLPFPVLLDEKGKARRLYGLRGVPTSVFVGAD
                     GVVRAVHQGPISEPVLRQRLSEIVPPAQ"
     gene            494..1624
                     /locus_tag="VFD73_24635"
     CDS             494..1624
                     /locus_tag="VFD73_24635"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HZI77163.1"
                     /translation="MATAPPLPTSRTALPRQTSGAWSSRDIVRAALLVAGVWLSLELL
                     WAARSVFVLAFLGTLFGITLSAAVTWLSRRGLPRPLGVLLVVLAVLGALTALGAVVAP
                     RIGEQVQQLEDQLPDAVSQVASWIRERQGWIAQIVHGPGSQATGPSPGGNIRQTLAQQ
                     IAGLGGHFFSIFSSALTILASVVVILFVAIFIAVEPRTYRRGILHLVPHAGRSKATEI
                     LDAIGVTLRRWLAAQLIGMVVIGSVTTIALLLLGVRAAIALGIIAGLLEFIPYFGPIL
                     SAVPAVAMAFLDGPEKALWVIFAYLAIQQLEGNLLMPLLMKEGLDLPPALTIIAQAVL
                     ALIFGFVGLLIAVPLLGTVMVPIKLLYVQDVVGDEVPLPGQG"
     gene            1709..>2358
                     /locus_tag="VFD73_24640"
     CDS             1709..>2358
                     /locus_tag="VFD73_24640"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HZI77164.1"
                     /translation="MVAIESLLDQAFSRAAGAPRIDGNRVTLLRDAAENYPAWLEAIA
                     GARHYIHFESYIIRDDTSGRRFADALMAKAKEGVAVRLLYDWMGALGKTPARYWAALR
                     RAGIEVRCFNPFRFSSPLGWVHRDHRKSLIVDGEVGFITGLCVGDPWVGDPEKGVAPW
                     RDTGIEVRGPAVPEIERAFARVWSVVGPPLTPVQQQGDEAVPVGDVALRVVASEPDR"
BASE COUNT          371 a          752 c          758 g          477 t
ORIGIN      
        1 gacggcgggc tcgatagcct ctcgcactac gccggccatc ccatattgat caacttctgg
       61 gcatcgtggt gcacgccgtg tcgcagtgag atgcctttcc ttattacagc ctatcagaac
      121 catcaggggg agaggctgac ggtgcttgcc attgacctca aggaccagga ggggtcgacc
      181 aaggacgtca gcaagttcgt cagcgaattc cgacttccct tccccgtgct gctcgatgag
      241 aaaggaaaag cccggcggct gtacggcctg cgcggcgttc ccacttcggt gtttgtgggg
      301 gcggacggcg tggtgcgtgc ggttcaccag ggacccatca gcgagcccgt gctgcgacag
      361 cgcctctcgg agatcgtccc acccgcgcaa tgaacaaggg cgctcgttcc atgtgcgcca
      421 tctcacggct cccgccgatg tgagttgcca tcctagcggt ccgcaccgtt ttctacgacc
      481 gtaggagttc cgtttggcaa ctgctccgcc gctccccaca tccaggaccg ctcttccccg
      541 tcaaacctcc ggggcctggt cgagccgaga catcgtgcgc gctgctttgc tggtggccgg
      601 ggtatggctc tccctcgagc tgctctgggc cgcgcgctcg gtgttcgtcc tcgccttcct
      661 tggcactctg ttcggcatca cgctgtcggc ggcggtcacc tggctcagtc gacgcggcct
      721 tccccggccg ctcggcgtgc tgctggtggt gctcgcggtc ctcggcgcgc tgaccgcact
      781 gggcgcggtg gtggctcccc gcatcggaga gcaggtccag caactggagg accaactgcc
      841 ggacgccgtc agccaggtgg cgtcgtggat ccgggagcgg cagggctgga tcgcccagat
      901 cgtacatggc cccggctccc aggcaacggg gccgagtcca ggcggaaaca tccgtcaaac
      961 actggcccag caaatcgccg gcttgggcgg ccacttcttc tccatcttct ccagcgctct
     1021 cacgattctc gcaagcgtgg tggtcatcct cttcgtcgcc atcttcatcg ccgtcgagcc
     1081 caggacctat cggcgaggga tcctccatct ggtgcctcac gccggccggt ccaaggcaac
     1141 cgagattctg gacgcgattg gggtgacgct ccggcgctgg ctggcagcgc aactgattgg
     1201 catggtggta atcgggagcg tgaccacgat cgcgctactt ttactcggtg ttcgcgccgc
     1261 catcgcactc ggcatcatcg ccggattgct cgagttcatc ccttacttcg gtcccatcct
     1321 ctccgcggtc cccgcggtgg cgatggcatt tctcgacgga ccagagaagg cgttgtgggt
     1381 catcttcgct tatctggcga ttcagcagtt ggagggcaac ctgctgatgc cactcctgat
     1441 gaaggagggt ctggatctgc cacccgcgct gacaattatc gcccaggcag tgctcgccct
     1501 gattttcggc ttcgtcggcc tcctcatcgc cgttcctctg ctcggcaccg ttatggtccc
     1561 gatcaaactg ttgtacgtgc aggatgtggt cggtgatgaa gtgcctctac cgggccaggg
     1621 ataaacggcc tacagtcttc tgttgctgac agtttaggcg acagaagcgg ggccaggatc
     1681 cgccgcgtcg cagaagctca ggaggacgat ggtcgcaatc gaatcgctgc tggatcaggc
     1741 gttctcccgt gccgcgggag ctcctcgaat cgatggcaac cgggtgactc tgctgcgtga
     1801 tgccgcggag aattaccccg cgtggctcga ggccattgca ggggcccggc actacatcca
     1861 cttcgagagc tacatcatcc gggacgacac ctccggacgg cggttcgccg acgccttgat
     1921 ggccaaggcg aaagaggggg tagcggtccg gctgctctac gactggatgg gtgcgctggg
     1981 caagaccccg gcccgctact gggccgcgct ccggcgggca ggcatcgagg tgcggtgctt
     2041 caatccattt cggttctcca gcccgctggg ttgggttcat cgcgaccatc ggaagagtct
     2101 catcgtcgat ggcgaggttg gcttcatcac cggtctctgc gtgggcgatc catgggtcgg
     2161 cgatccggag aaaggagtcg ccccgtggcg cgataccggt atcgaagtgc ggggaccagc
     2221 agtgcccgag atcgagcgag catttgcccg ggtgtggtcc gtggtgggtc cgccactgac
     2281 gccggtccaa cagcaaggag acgaggctgt tcccgtgggt gacgttgctc tgagagtcgt
     2341 cgccagcgag ccggatcg
//
LOCUS       DASRPQ010002179         1177 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2796584, whole genome shotgun sequence.
ACCESSION   DASRPQ010002179 DASRPQ010000000
VERSION     DASRPQ010002179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1177
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2796584"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..328
                     /locus_tag="VFD73_24645"
     CDS             <1..328
                     /locus_tag="VFD73_24645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77165.1"
                     /translation="EWWAKTEACAGKLAPMSSVNFYAVDAPTGAIELNGEMAHAWWVR
                     EGNRIYLPANALGEEWLVRHEMLHALLQRGTHPNNIFVNACHIASAAVWRDSTLTFDP
                     GNPRGK"
     gene            443..>1177
                     /locus_tag="VFD73_24650"
     CDS             443..>1177
                     /locus_tag="VFD73_24650"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HZI77166.1"
                     /translation="MRGPPTRARWVGLIAILALSILTGGWLLRRKAAPDGTVYQQARL
                     FENVVASIHTHYIDSLDEGDLYQTAAKGLVSSLHDPYAELLTRESYRQYQRQMSGTEV
                     DVGDVSSIGTGGSHAFGPGDVILSIDGKSTLGWSPRKLEEALAGGTGPFVTVVVRPWG
                     SNTPVVRRLTRTVVHVPAASDGILLGSGVGYIDLRRISEGAGLELRQAIDRLVDDGMT
                     SLVLDLRGNPGGLINEGVRVASLFLHP"
BASE COUNT          207 a          372 c          369 g          229 t
ORIGIN      
        1 ggaatggtgg gcaaagaccg aggcctgcgc cggcaagctg gctccgatgt cgtcagtcaa
       61 cttctacgcg gtggatgccc ccaccggagc catcgagctg aacggcgaaa tggcccacgc
      121 ctggtgggtt cgggagggca accggatcta tcttccggcg aatgcgttgg gtgaagaatg
      181 gctggtgcgg cacgagatgc ttcatgccct gctgcagcgg gggacccatc ccaacaacat
      241 ctttgtgaat gcgtgtcaca tcgcgtccgc agccgtttgg cgcgactcga ctttgacctt
      301 tgacccggga aatccgcgag ggaaataagt tcccgggcct ttcttttgct cacagtgaaa
      361 cggttgttgc cactgctgcg ttcttacgcc atagggagat gcatccagca gaccttctgg
      421 catttcgcgg gagcttttcg gcatgagggg accccccact agagcccgct gggtcgggtt
      481 aatcgcaatc ctcgccctct ccatactcac tggaggatgg ctcctgcgac gcaaagccgc
      541 gcccgacggg accgtctatc agcaggcaag gctgttcgag aacgtcgtcg cctccattca
      601 cactcactac atcgactcgc tggacgaagg cgacctctac cagaccgctg ccaagggcct
      661 ggtctcctcg ctgcacgatc cctacgccga gctgctgacc cgggagagct accgccagta
      721 tcagcggcag atgtcgggca ccgaggtcga tgtgggtgat gtctcgagca tcggaaccgg
      781 aggctcccac gccttcgggc cgggcgacgt catcctgagc atcgatggca agagcaccct
      841 tggatggtcg ccgcgcaagc tggaggaggc tctggccggc ggcaccggtc ccttcgtcac
      901 tgtggtggtg cgtccctggg gctccaacac acccgtggtc cgccgtctca cccgaacggt
      961 ggtgcacgtc cccgccgcgt ccgatggcat cctgctgggc tcgggtgtgg gctacatcga
     1021 tctcagaagg atcagtgaag gcgccggcct ggagctcagg caggccatcg atcgcctggt
     1081 cgacgatggc atgacgtcac tggtgttgga tctccgcggc aatcctggtg gactgatcaa
     1141 cgagggcgtc cgcgtcgcca gtctcttcct ccatccg
//
LOCUS       DASRPQ010002180         4763 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1847251, whole genome shotgun sequence.
ACCESSION   DASRPQ010002180 DASRPQ010000000
VERSION     DASRPQ010002180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4763)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4763)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4763
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1847251"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            168..557
                     /gene="gcvH"
                     /locus_tag="VFD73_24655"
     CDS             168..557
                     /gene="gcvH"
                     /locus_tag="VFD73_24655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HZI77167.1"
                     /translation="MSNVPDDLVYTAEHEYVARTGDPSIVKIGITDYAQGELGDVVFV
                     RLPKPGDQFEAHQAFGEIEAVKAVSELYSPLAGEVVEVNDGLDQDSGVVNRDPYGDGW
                     MVKLRVANSDALKDLLSAKAYRSHIGE"
     gene            651..3554
                     /gene="gcvP"
                     /locus_tag="VFD73_24660"
     CDS             651..3554
                     /gene="gcvP"
                     /locus_tag="VFD73_24660"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HZI77168.1"
                     /translation="MTSVLPRRTTTETLDVLHPSHFAYRHIGPRRGDVEEMLELLGYD
                     SLDSFIDAVVPEQIRLNRPLALPPGRSEREVLQALRGLAAMNRVFRSYIGMGYAGCFT
                     PQVIQRNVLENPGWYTAYTPYQAEIAQGRLEALLNFQTMVSDLTGLAIANASLLDEAT
                     AAAEAMTLSLAVKGSSRDPMYLVDERCHPQTIAVIQTRAEARGIRIRVGDTETFAFDD
                     QVIGALVQYPATDGELRDFRPLCERAHRSSALVTAATDLLSLTLLLPPGEWGADVAVG
                     NSQRFGVPMGYGGPHAAFFATRDAYKRFLPGRIIGVSRDRDGRPALRMALQTREQHIR
                     RDKATSNVCTAQVLLAVMASMYAVYHGPSGLRRIAERVHTRTVILANALRRLRYRVVY
                     ESFFDTLCVETEAWALPRLLDAARARNINLRQLSPTRLCVALDETVTLGDLADLIAIF
                     SLNEALPFMLDDIGVKRERAIPQSLNRTSSYLDHPVFHRHHSETEMLRYIKRLEARDL
                     SLTSAMIPLGSCTMKLNATTEMMPVSWREFNRLHPFAPRDQAAGYQLLFNQLQYQLAE
                     ITGFAAVSLQPNAGSQGEFAGLLVIRAFHRSRGEPHRTTCLIPQSAHGTNPASAVMAG
                     MKVVAVKSDAKGNIDLADLRAKAAANRDTLAALMITYPSTHGVFEGSVREICRIVHEH
                     GGQVYMDGANMNAQVGLCRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVAGHLVP
                     FLPGHPVVDLDHSSACGTVSAAPWGSAAILPISWAYIALMGYDGLTEATRIAILNANY
                     VARRLADHYPLLYTGQNGLVAHECIIDTRPYKASAGVDVEDIAKRIIDYGFHPPTVSF
                     PVPGTLMIEPTESESKEELDRFCDALISIREEIRQIEEGKADRENNLLTNAPHTLEQV
                     IADGWNRPYPREQAAYPSRAVREYKVWPTVGRIDSAYGDRNLVCSCPPIEAYG"
     gene            3547..4341
                     /locus_tag="VFD73_24665"
     CDS             3547..4341
                     /locus_tag="VFD73_24665"
                     /inference="COORDINATES: protein motif:HMM:NF015084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77169.1"
                     /translation="MDSSRGAGSWHLWTDATPRPGYTNMAVDLALLDRTERSGESWLR
                     LYQWEPHCLSFGRNEPAARRYDAARIQRLGLPTVRRPTGGRAVWHAYELTYAVSSPTL
                     CFSSAAEAYIEIHDMLRQALASIGVQGSLAPRLRRVGLEAGSCFSSAAGGEVLVQDSK
                     VVGSAQLRRQACFLQHGSIMLQGNQSLVDSLQCGRSAPSPDVKGGITVPLGRSVTPEE
                     MAEAVARTATSRWASYWVRESHPDEVLDAAARYFPRFRSAQWTWNR"
     gene            4359..>4763
                     /locus_tag="VFD73_24670"
     CDS             4359..>4763
                     /locus_tag="VFD73_24670"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZI77170.1"
                     /translation="MRLRVVGVAAFVLTAAAAALPAQSGTDRSNSIVIVTGQQPTTPI
                     PTLMEGAAASVGNLELADQLFLRLAGLGPTVMTAGDRGFVPLLARSWTRRDSVTLVFD
                     LDPRARWQDGVPVTARDVVFTFGRAQNPKLAPR"
BASE COUNT          849 a         1548 c         1489 g          877 t
ORIGIN      
        1 cgtcggccct caaacgtccg gcgagcgact acatcatcga gaacgacggc gatctcgcgt
       61 cgctcgagcg cgcgacgaac gcggtgtggc aggcactcat ggaacgcgct tgacctgacc
      121 ccttgccccg ccttatcctc ctcccgcatc caccggggag agcgcacgtg tccaacgtgc
      181 cggacgatct ggtttacacc gcagaacacg agtacgtcgc gcgcactggc gacccctcca
      241 tcgttaaaat cggaatcacc gattatgccc agggcgagct tggggacgtc gtctttgtac
      301 ggcttcctaa accaggtgat cagttcgagg cgcatcaagc cttcggcgaa atcgaagccg
      361 tcaaagccgt gtccgagctg tacagcccgc ttgccggcga agtcgtggag gtcaacgacg
      421 gcctcgacca ggattcgggc gtggtgaacc gtgatcccta cggcgatggc tggatggtca
      481 agctcagagt cgcgaacagc gacgcgctga aggatttgct ttcggccaaa gcatatcggt
      541 cgcatatcgg agagtgaccg cgtcgaacgc ctgtgcttct ccgccacccc tggtggcccc
      601 tccggtgaca ttccgatgca atcgtcaggc ttcaggagtt tcagcatccg atgactagcg
      661 tgctgccccg caggacgact accgaaacgc tggacgtgct gcacccctcc cactttgcct
      721 atcgtcatat cggcccgcgg cgcggcgatg tcgaggagat gctcgagctg ctggggtatg
      781 actccctcga cagcttcatc gatgcggtgg tgccggagca gatccgactg aatcgcccgc
      841 tggcgcttcc acccggccga agcgagcgcg aggtgctcca ggcccttcga gggttggcgg
      901 cgatgaaccg ggtgttccgc tcctacatcg ggatgggcta cgccggatgc tttactcccc
      961 aggtgatcca gcgcaacgtg ctggaaaacc ccggttggta cacggcgtac accccgtacc
     1021 aggccgaaat cgcccagggc aggctcgaag cactgctcaa cttccagacc atggtttccg
     1081 acctgaccgg gttggcaatc gccaacgcat cgcttttgga tgaggccacc gcggccgcgg
     1141 aggcaatgac cttgagtctg gcagtgaaag ggagctcgcg ggatccgatg tatctggtcg
     1201 acgagcggtg tcatccccag accatcgcgg tgatccagac ccgagccgag gcgcgtggta
     1261 tccggatcag ggtgggagat actgagacgt tcgcgttcga cgaccaggtg atcggcgcac
     1321 tggtgcagta tcccgccacc gacggagagc ttcgggattt ccggccgtta tgcgagcgcg
     1381 cccaccggtc gagtgcgctg gttaccgcgg caactgatct gctcagcctc accttgctcc
     1441 tgccgcctgg ggagtgggga gccgacgtgg ctgtgggcaa cagccagcgc ttcggggttc
     1501 ccatgggata tggagggcct cacgcggcct tcttcgctac cagggatgcc tacaaacgct
     1561 ttctgccggg tcgaatcatc ggtgtctccc gcgatcggga cggccggccg gcgctccgaa
     1621 tggcactgca gacccgagaa cagcatatcc gccgcgacaa ggccaccagc aatgtctgca
     1681 cagcgcaggt cctcctggcg gtcatggcca gcatgtacgc ggtgtatcac ggtccctccg
     1741 gcctgcgccg gatcgcggag cgggttcata ccaggacagt gatcctggcg aacgccttgc
     1801 gacgacttcg ttatcgagtg gtatacgaga gtttcttcga cacgctgtgc gtggaaaccg
     1861 aagcctgggc tttgccccgc ctgctcgacg cggcccgggc ccgcaacatc aacctgcggc
     1921 agctttcgcc cactcggctg tgtgtcgccc tggatgagac ggtcaccctg ggcgatctgg
     1981 ccgacttgat cgcgatcttc tcgctcaacg aggcactgcc cttcatgctg gacgacatcg
     2041 gcgtgaagcg cgaacgcgcg attcctcaaa gcctcaaccg caccagttcc tatctggatc
     2101 atccggtctt ccaccggcac cactcggaaa ccgagatgct ccggtacatc aagcggctcg
     2161 aggcacgcga tctctcactc acctccgcga tgatcccgct tggctcctgc accatgaagt
     2221 tgaatgccac gacggagatg atgccggtga gctggcgcga gttcaatcga ctgcacccgt
     2281 ttgctccgcg agaccaggcc gccggctatc aactcctgtt caatcaactc cagtaccagc
     2341 tggctgagat taccgggttc gccgccgttt ctcttcagcc caatgccggc tcgcaggggg
     2401 aattcgccgg tctgctggtg atccgcgctt ttcaccggtc tcggggagag ccccatcgga
     2461 ccacctgcct gataccgcaa tcggcccatg ggaccaaccc cgccagcgcg gtgatggccg
     2521 gcatgaaggt cgtcgccgta aaaagtgatg cgaagggcaa catcgatctc gccgacctcc
     2581 gcgcgaaggc tgccgcaaac agagataccc tggcagcgct catgatcacc tatccgtcga
     2641 cccacggcgt gttcgaaggc tcggtgcgcg agatctgccg tatcgtccac gagcacggcg
     2701 ggcaggtcta catggatggg gcgaacatga atgcgcaggt gggactctgc cggcccggcg
     2761 acatcggggc cgacgtgtgt catctcaatc tgcacaagac gttctgtatt cctcatggtg
     2821 gtggcggccc tggcatgggc ccgattggcg tggccgggca cctggtaccg ttcctgccgg
     2881 ggcatcccgt ggtcgatctg gaccacagct cagcgtgcgg cacagtatcg gcagcaccct
     2941 ggggcagcgc cgcaatcctt ccgatctcct gggcctacat cgcgctcatg gggtacgacg
     3001 gcctgaccga ggccacccgc attgcgattc tgaacgcgaa ctacgtggcg cgacgtctgg
     3061 ccgatcacta ccccttgctg tacaccgggc agaacggact ggtcgcgcac gagtgcatca
     3121 tcgatacccg cccctacaag gcgtcggccg gggtcgatgt cgaagacatc gccaagcgga
     3181 tcatcgatta tggattccac ccgcccacag tctcgttccc ggtgccgggc actctcatga
     3241 tcgagccgac cgagagtgaa tccaaggagg agctggaccg cttttgtgat gccctgattt
     3301 ccatccggga ggaaattcgc cagatcgagg agggaaaagc cgatcgggag aataatcttc
     3361 tcaccaatgc cccgcatacc ctcgagcagg tgatcgcgga cggctggaat cggccgtatc
     3421 cccgggagca ggcggcgtat ccctcgcgag cggttcggga gtacaaggtg tggcccaccg
     3481 ttggccggat cgacagtgca tacggcgatc gcaacctggt gtgcagttgc ccgccgatcg
     3541 aggcctatgg atagctcccg tggggctggt tcgtggcatc tgtggaccga cgccactccg
     3601 cgacccgggt ataccaacat ggcggtcgac ctcgcgttgc tcgaccgaac cgagcgctcc
     3661 ggcgagagct ggctgcggct gtaccagtgg gagccccatt gtctctcctt cgggcggaat
     3721 gagcccgctg cccgccgcta cgacgcggcc cgcatccagc gactcggtct tcccactgtc
     3781 cgtcgaccga ccggcggccg tgcggtgtgg catgcgtacg aattgaccta cgccgtcagc
     3841 agcccgacgc tgtgtttcag ctctgcagcc gaagcgtaca ttgaaattca cgacatgctc
     3901 cggcaagcac tcgccagcat cggcgtgcag ggatcgctcg cgccccggct gcggagagtg
     3961 ggactcgaag cgggctcgtg tttctcttcg gcggcaggcg gcgaagtgct ggtgcaggat
     4021 tccaaggtgg tgggtagcgc ccagctgcgt cggcaagcgt gtttcctcca gcacggatcg
     4081 atcatgctgc aggggaacca gtctctggtc gacagcctcc agtgtggtcg gagcgcaccc
     4141 tcgcccgacg tcaagggtgg gattactgtc ccgctcggac gatcagtgac tcccgaagaa
     4201 atggctgagg cggtcgcgcg caccgcgacc agccgctggg ccagctactg ggtccgggaa
     4261 agccatcccg atgaagtcct cgatgccgca gcccgatact tcccccggtt tcggtctgct
     4321 caatggacgt ggaacaggta gcagccgggg agcatatcat gaggctcaga gtcgttggtg
     4381 tggcggcctt cgtcctgacc gcggctgccg ccgcgcttcc ggcacagtcg ggtaccgatc
     4441 gcagcaacag catcgtgatt gtcaccgggc agcagcccac cacgccaatt cccactctca
     4501 tggaaggcgc ggccgccagc gtcggcaatc tggagctggc tgaccagctg tttctgcggc
     4561 ttgccgggct gggcccaacg gtcatgacgg cgggagaccg aggcttcgtt cccttgctgg
     4621 cccgctcctg gacccgccgg gactcggtga ctctggtctt cgacctggac cctcgagccc
     4681 ggtggcagga tggagtgccg gtcaccgccc gcgacgtggt ctttaccttt ggccgggcgc
     4741 agaaccccaa gctcgcgccg cga
//
LOCUS       DASRPQ010002181         2248 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3069766, whole genome shotgun sequence.
ACCESSION   DASRPQ010002181 DASRPQ010000000
VERSION     DASRPQ010002181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2248
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3069766"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(164..448)
                     /locus_tag="VFD73_24675"
     CDS             complement(164..448)
                     /locus_tag="VFD73_24675"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI77171.1"
                     /translation="MPAPHPPEFRRRAVELAREKAAPVAQIAKDLGISESCLRNWMAR
                     ADIDEGRKEGLTSDERKELVRLRRDKRRLETENEILRRAAALFAKEISPK"
     gene            complement(762..1574)
                     /locus_tag="VFD73_24680"
     CDS             complement(762..1574)
                     /locus_tag="VFD73_24680"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZI77172.1"
                     /translation="MDSGDTAQRSLEHWSEWGLREMEKFYALATEDYRQLALAADWAA
                     LLGERAHQGWSLLDVACGSGKFPTALVRFTAVASLPGVAYDLLDPSAFSVATARAALA
                     PPFMPRNDLVMPLQELPSSCGPYDVVWATHALYALPPDELDAAMARFASALAPEGLGV
                     VAQATGRSHYLSFYDAYRAGVRDATPYTTAEMVAASLRTAGMDVCEQVITYETGTSDR
                     DVAEGFLQRCAFDDTVSLEEMEAAPVLGEYLATCRRPDGSYVFSNEVALLWM"
     gene            2062..>2248
                     /locus_tag="VFD73_24685"
     CDS             2062..>2248
                     /locus_tag="VFD73_24685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77173.1"
                     /translation="MLNVSVPQVNSYVVGIREAVCKPSALPCQQLLIRHHTLCGVMRK
                     LRARMADMGTACYVCAWP"
BASE COUNT          385 a          735 c          738 g          390 t
ORIGIN      
        1 tggatctggg cgatcatggc gctcagctgc tcatcagcgc gctgccgggc cgagggcttg
       61 cggccgcgcc attcgtagaa tcccgatgct gagatgccca gcacccggca ggccaccgca
      121 acgggcaggc cgtcggcggc aaggtcacgg accagccgga agcctatttt gggctgatct
      181 ccttcgcgaa caacgccgcc gcccgccgca agatctcgtt ctcggtctcc agccgccgct
      241 tatcgcggcg cagccgcacc agttccttac gctcgtcgct ggtcaggccc tccttgcggc
      301 cctcatcgat atcggcgcgg gccatccagt tccgcaggca cgactcgctg atccccagat
      361 ccttcgcgat ctgggcgacc ggcgcggcct tctcccgcgc cagctcaaca gcgcggcggc
      421 ggaactccgg cgggtgcggt gcaggcatcc agactcctcc ctcggcgacc agtgtcgcca
      481 aagaccaggt gtccggagaa gcgggggaag ctcagatccg tgtgcctacg gagctggtca
      541 ggcagcatca agtcggtagg gggctgcgag ttccacccgc agttgctcat cgtcggcggg
      601 gtccacgtcg ggaaggccgc ggccggccac cagcgctatc ggcgcatcat cgttctccgc
      661 aagcgtgacg taccagtccc accagtccta atcgtcacct gcccagtcct ggtcaatccc
      721 gccgtcacga ttggccggcg ggagcggaga actctccgcg ttcacatcca cagcagcgcc
      781 acctcattac tgaacacgta ggacccatcg gggcgtcggc atgtcgccag gtactcgccc
      841 aggaccggtg cggcctccat ctcctcgagg ctcacggtgt cgtcgaaggc acagcgctgg
      901 aggaaaccct cggcgacgtc tcggtcgctg gttcccgtct cataggtgat cacctgttca
      961 cagacgtcca tgcctgcggt gcgcaaggaa gccgccacca tctcggccgt ggtgtaagga
     1021 gtcgcgtcac gcaccccggc ccgataggcg tcatagaacg acaggtagtg cgagcggccc
     1081 gtcgcctgag cgacgacccc cagaccttct ggggccaggg ccgatgcaaa acgcgccatt
     1141 gcggcatcga gttcgtcggg cgggagggcg tagagggcat gggtcgccca gacaacgtca
     1201 taggggccgc aggagctggg aagttcctgc aacggcatca ccaggtcgtt gcgtggcatg
     1261 aacggaggtg cgagggcagc gcgagccgtg gctacagaga aggctgaggg gtccagaagg
     1321 tcgtacgcga cgccaggaag cgatgcgacc gcggtgaacc tcacgagggc cgtcgggaac
     1381 ttgccgctgc cgcaggcgac atcgaggagc gaccatccct ggtgggcgcg ctcaccgagg
     1441 agcgccgccc agtcagcagc gagcgcgagt tggcggtagt cctccgtggc gagcgcgtag
     1501 aacttctcca tctcgcgaag gccccactcg ctccaatgtt cgaggctgcg ctgcgccgta
     1561 tctcctgagt ccatggtgct cctcgggggg atggggccgt tcggccagta gaacttgtcc
     1621 caaaggcgtc aggaccaatc tatggtgatt caggctgacc acagggagca gcatacatcc
     1681 ggtgtcatct acgagcatgg accacctgga tgagctgcgc gtggcaacgg cctcgtcgtt
     1741 gccgctgaac gggcttgccc cccgcacctg cgcaagggac cacgccacgt tcgaggccct
     1801 ctccaatcaa cgcggcctta ctgcggattg gctcgtggac cgcctgagct catcgcgcac
     1861 ccctgtcagt cttgactgtg ggctgcggcg gcggtgcgct cgacgctggt tcacgcaggc
     1921 tgggagcgtt tgcgtggagg gtcttcctgc tggtttgcgc aggtcaggcg attttgcgga
     1981 cggcgtccgt ggctgcccgt gccatgtgcg gcccggatgc ccgcgggcac ggacatatag
     2041 cggatagcgt cggtgccgcg aatgctgaac gttagcgttc cgcaggtcaa cagctatgtg
     2101 gtaggaataa gagaagcggt ctgtaaaccg tcggctctgc cttgccagca acttctcatc
     2161 cgccatcaca ccctttgcgg cgtgatgcgt aagctgcgcg ccagaatggc tgatatgggc
     2221 accgcgtgct atgtatgcgc atggccag
//
LOCUS       DASRPQ010002182         1139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3069873, whole genome shotgun sequence.
ACCESSION   DASRPQ010002182 DASRPQ010000000
VERSION     DASRPQ010002182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3069873"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..226
                     /locus_tag="VFD73_24690"
     CDS             <1..226
                     /locus_tag="VFD73_24690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77174.1"
                     /translation="RRVGHDRRERQLSVRLHPEVALYLLEDEPRLLQTLTKITGVDIE
                     LRDDPMMRLDEFRLMSRPAGRDVTDLYAVA"
     gene            313..627
                     /gene="rplU"
                     /locus_tag="VFD73_24695"
     CDS             313..627
                     /gene="rplU"
                     /locus_tag="VFD73_24695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HZI77175.1"
                     /translation="MYAIIRAGGKQFRAEKGKTLRLPLMSAEAGSKITFDEVLLSSDG
                     QTVKAGAPLVKGAKVLGEVVGAGKESKIYVFKFKRRKNYRRKTGHRQGYTEVRITDLQ
                     LG"
     gene            635..907
                     /gene="rpmA"
                     /locus_tag="VFD73_24700"
     CDS             635..907
                     /gene="rpmA"
                     /locus_tag="VFD73_24700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007369914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HZI77176.1"
                     /translation="MAHKKGVGSSRNGRTSNPQYLGVKRYGGEKVLAGNILVRQRGTK
                     FHAGRNVRRANDDTLFALVDGVVKFEYKDKNRQKVSVYPAEAGAAS"
BASE COUNT          244 a          335 c          371 g          189 t
ORIGIN      
        1 ccgccgcgtg ggacacgacc gtcgcgagcg gcagctcagc gtgcggctgc accccgaggt
       61 ggcgctgtat ctgctggaag acgagccgcg cctgctccag acgctgacca agatcaccgg
      121 agtcgacatc gagctccggg acgatccgat gatgcggctc gacgagttcc ggctcatgag
      181 ccggcccgcg ggccgggatg tgacggatct gtacgcggtg gcgtgaacgg tggttctcgc
      241 ggcacttgtc ccaagtacca gccccgtcta cctttaaagg ctaacttcga gccttaacgc
      301 caggtaccat ccatgtacgc gatcatccgc gccggcggga aacaattcag ggctgaaaag
      361 gggaaaaccc tgaggctccc gctcatgagc gccgaagccg gttccaagat caccttcgat
      421 gaggtgctcc tctcctccga cgggcagacg gtcaaggccg gtgcccctct ggtcaaggga
      481 gccaaggtgc tgggcgaggt cgtgggagcc ggcaaggaat ccaagatcta cgtgttcaaa
      541 ttcaagcggc ggaagaacta tcgccggaag accgggcatc ggcagggcta caccgaggtc
      601 cgcatcaccg acctccagtt gggctgagga atccatggca cacaagaaag gcgtcggctc
      661 cagtcgcaac ggccggacca gcaacccgca gtacctcggg gtcaagcgct acggtggtga
      721 gaaagtgctc gccggaaaca ttctggttcg ccagcgcggc accaagttcc acgccggaag
      781 aaatgtgcgg cgggcaaacg atgacacgct gtttgcgctg gtcgatggag tggtcaagtt
      841 cgagtacaag gacaagaacc ggcagaaggt ttcggtctac cctgctgagg cgggggctgc
      901 cagctaggaa ctgagggctc gcagcgaaag agggtaggga cgcggagcta ctccgcgtcc
      961 ctttttgtta acttccgcgc atggggttgc aattccatgc tcggggcccc tatgggtctc
     1021 agcgcttcgg aggtaagcca atgaccaaat cgacactctt cgaccgactc aaccaggagc
     1081 tcgaggcgtt cgggaagaag gcccaggccg cgcttgatga gggaaagctc cagatcgag
//
LOCUS       DASRPQ010002183         2026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1847390, whole genome shotgun sequence.
ACCESSION   DASRPQ010002183 DASRPQ010000000
VERSION     DASRPQ010002183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2026
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1847390"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..673)
                     /locus_tag="VFD73_24705"
     CDS             complement(<1..673)
                     /locus_tag="VFD73_24705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77177.1"
                     /translation="MTSATETTRQYGGVSGERRIGYTASPAQYRRRATDLADTYEQED
                     SVQRRARGLGWFSIGLGLAEMAAPRAVARLIGISDDDETRNTMFALGVREITSGIGIL
                     SNSRPTGWVWSRVGGDLMDLALLGKAMNQDENDRQRVAAATAAVLGVTVLDFITGQQL
                     SRGSNGGSEHGARSGNGFSRAGRRHGIQVTEAITINRPRNEVYGFWHNFENLPRFMAH
                     LESVEV"
     gene            complement(895..1314)
                     /locus_tag="VFD73_24710"
     CDS             complement(895..1314)
                     /locus_tag="VFD73_24710"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI77178.1"
                     /translation="MATSSPDASGQESRQVVLVVDDEQGLRDLVCRTLRAQGYRTLEA
                     GHGAEALEVIETSPDPVDLVVTDVVMPGMDGRELGRRLAQRWPDLPILYISAYEVNDI
                     FRRGSPRDSAPFLQKPFPMDGLITTIRSLIERRSPAT"
     gene            complement(1447..1596)
                     /locus_tag="VFD73_24715"
     CDS             complement(1447..1596)
                     /locus_tag="VFD73_24715"
                     /inference="COORDINATES: protein motif:HMM:NF033488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HZI77179.1"
                     /translation="MLVWLAVILLVAWLLGWGVFHVAGGLIHLLLVIALVVFLINFIT
                     GRRTV"
     gene            1803..>2026
                     /locus_tag="VFD73_24720"
     CDS             1803..>2026
                     /locus_tag="VFD73_24720"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HZI77180.1"
                     /translation="MEPALELNHTLDRFRLLFEGTVDYAVFHLGFDGLIETWNPGAER
                     IFGFTSTEIVGKHGSVLWTPEDNLQGIPER"
BASE COUNT          404 a          637 c          626 g          359 t
ORIGIN      
        1 tgacctccac cgattcgagg tgcgccatga agcgggggag attctcgaaa ttgtgccaga
       61 agccgtacac ctcattccgc gggcggttga tggtgatcgc ctcggtcacc tgaatcccat
      121 gccgccgacc ggcgcgggaa aaaccattcc cggacctggc gccgtgctcc gatccaccat
      181 tactgccgcg gctgagctgc tgaccggtta tgaagtcgag caccgtgact ccgagaacgg
      241 cggctgtcgc tgccgctacc cgctgccggt cgttctcgtc ctggttcatg gctttgccga
      301 ggagggcgag atccatcaag tctccaccaa ccctgctcca cacccagccg gtgggccgcg
      361 agttcgacag gatgccgatg ccgctggtga tctcccgaac gccaagggca aacatcgtgt
      421 ttcgggtctc gtcgtcgtcg ctgataccga tcaatcgcgc gacggctcgc ggtgccgcca
      481 tctcagcgag gcccaggccg atactgaacc agcctagccc gcgggcgcgc cgctggacac
      541 tgtcttcctg ctcgtatgta tcggcgagat ccgtggcccg ccggcggtac tgcgccggag
      601 aagcggtata gccgatccgc cgctcgccgc taacgccgcc atactgtcgg gtggtctcgg
      661 ttgcgcttgt cattgttccc ccttcatgga ttgctgacgt attcgtctgc cgagtgacca
      721 agctggccag ccggcgagag ctggttgagc tgcgcgacca cgctcttcgc cggtgtcaga
      781 ggaggggcgc gaccgcggtt ctatagggca gcaactgtta gccgtcagcg caccgcaggt
      841 cggtgagccg cgtcactgga aaatcagcaa aatcgatggt gtacgtgcct gcgatcaggt
      901 ggcgggagag cggcgctcga tgaggctccg gatcgtagta atgagaccgt ccatggggaa
      961 cggcttctgc aggaaagggg cggagtcccg aggagacccg cggcggaaaa tatcgtttac
     1021 ctcgtatgcc gagatataca ggatgggaag atccggccat cgctgagcca gacgacgccc
     1081 gagctcgcgg ccatccatgc cgggcatgac gacatcggtg accacgagat cgacggggtc
     1141 cggcgacgtc tcgataactt ccagcgcttc ggcgccgtgc cccgcctcga gcgtgcggta
     1201 gccttgcgcc cgaagtgtac gacagaccag gtcccgcaga ccctgctcgt cgtctactac
     1261 gaggacaacc tgcctcgact cttgtccgga tgcgtcaggt gaggaagtcg ccactgcctc
     1321 gggggatgta gctcaaactc atgaacgcgg acatggcggc aagttaccat gacatttccc
     1381 agccgccaat ggggtcaagg cacaaaaaag gggcccttgg ggggcccctt tatgccgacg
     1441 ggcgagctac acggtccggc ggccggtgat gaagttgatc aggaacacga ccagcgcgat
     1501 caccaacagg agatggatga ggccgccggc gacatggaat actccccacc ctaacagcca
     1561 ggcaaccagc aggataacgg cgagccagac gagcatgaca atcctccagt gagagtagct
     1621 ccccaaccgg caccactcgc gcaacataga aggtcccggc agaggtgtct gtgagcgttc
     1681 ccacagatcc ggcgcgaccc gacccacgaa tcccgagcta atcgggtatc cacgtcacag
     1741 cctaagtgcg gaaaacaggt caccttgcga aaggtgcatc ggtctcagct ggggaggcag
     1801 cattggaacc ggctctcgaa ctcaatcaca cgttggaccg tttccgtctg ctgttcgagg
     1861 gcaccgtcga ttacgccgtc ttccacctcg gcttcgacgg actcatcgag acctggaatc
     1921 caggcgccga acgtatcttc ggtttcacct cgactgaaat cgtcggaaag cacggctccg
     1981 ttctgtggac gccggaggac aacctccagg gaattccgga gcggga
//
LOCUS       DASRPQ010002184         1212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3069992, whole genome shotgun sequence.
ACCESSION   DASRPQ010002184 DASRPQ010000000
VERSION     DASRPQ010002184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1212
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3069992"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            166..312
                     /locus_tag="VFD73_24725"
     CDS             166..312
                     /locus_tag="VFD73_24725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77181.1"
                     /translation="MQTHRRSRILVVDDEVAIRRLLERAPRERGHEVVAVSDGHTLEA
                     VIAL"
     gene            317..577
                     /locus_tag="VFD73_24730"
     CDS             317..577
                     /locus_tag="VFD73_24730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI77182.1"
                     /translation="MITNNCMPGMEGQELIARLRAARPSLAIVRLDDMSGPPDVELPA
                     DIPNLTKPFPMTSLVTRIEELLPSRTQMGSQVTASPDSEPLA"
     gene            646..1131
                     /locus_tag="VFD73_24735"
     CDS             646..1131
                     /locus_tag="VFD73_24735"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI77183.1"
                     /translation="MTAEDVKILPLNPGPLVLVVDDEARPRSTITRMVASLGYQARSC
                     HDGRAALRFLKAHPREVRLLLADLGMPHMDGGELAERAKDLDPRLIAVLMADPADPHL
                     HDLISGYAGFPFVPKPVSFADLAEKLERLLGIPATPTASPPSMDPPRSRRRRSSGQHS
                     V"
BASE COUNT          199 a          416 c          358 g          239 t
ORIGIN      
        1 gctgctccca gcggcggcag cctcggctgg gcctgcacgt tcccttggga ttcccaatgc
       61 gtcagtgttc cggccgtaca ttcggcacct agatatgacc tgggtcacac ctggttcctg
      121 tctaggtctc gcatgttggt cgggatgtgc acgcgaggag tatggatgca aacgcaccgc
      181 cggagtcgta tcctggttgt tgatgacgaa gttgcgatac gtaggctgct tgagcgtgcg
      241 ccccgggagc ggggccacga ggtcgtagcg gtgagcgacg ggcacaccct ggaggccgtg
      301 atcgccctat gatctcgtga tcaccaacaa ctgcatgcca gggatggagg ggcaggaact
      361 catcgctcgc cttcgagcgg cccgtcccag tctcgccatc gtgcgtttgg acgatatgtc
      421 tggcccaccc gatgtagaat tgccggccga cattcccaac ctcaccaagc ccttccccat
      481 gaccagcttg gttacccgga tcgaggagct gctgccttct cgcactcaga tggggagcca
      541 ggtcacggct tcacccgaca gtgaaccctt agcctgaacg agcacccgaa ccgccctctt
      601 cgtggagagg gccgactggc ggcaagcggc tgcctggagg cccccatgac cgcagaggac
      661 gtgaagatcc tgcccctcaa tcccggcccg ctggtcctgg ttgttgatga cgaggcccgt
      721 ccccgctcga ccatcacgcg tatggtagct tccctggggt atcaggcgcg cagttgccac
      781 gatggccgcg ccgccctccg tttcctcaaa gctcaccccc gtgaagtacg cctcctcctc
      841 gctgatttgg gcatgccgca catggacggc ggggagttgg ccgagcgcgc gaaggacctc
      901 gaccccaggc tcattgccgt gctgatggcc gatccagcag atcctcatct acacgatctc
      961 atctcgggct acgccggctt ccccttcgtc cctaaaccag tcagcttcgc cgatctggcc
     1021 gagaagcttg agcgtttgct cggcatcccc gcgacgccaa cggcatcgcc gccctcgatg
     1081 gatccgccgc gctcgcgtcg tcgtcggagt tccggtcagc actcggtctg acacatggcc
     1141 cgccctgccg caccagcact gtcgctcgtc gatccgatca tgccggtgct ttacccccag
     1201 ccgtttgatg gc
//
LOCUS       DASRPQ010002185         1017 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3070207, whole genome shotgun sequence.
ACCESSION   DASRPQ010002185 DASRPQ010000000
VERSION     DASRPQ010002185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3070207"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            242..685
                     /gene="rplM"
                     /locus_tag="VFD73_24740"
     CDS             242..685
                     /gene="rplM"
                     /locus_tag="VFD73_24740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019309628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HZI77184.1"
                     /translation="MRTFSPKDSDITRQWHVIDATDVVLGRLASHVAVLLRGKHKPIF
                     APHVDTGDFVIVINADKVSLSGAKLEDKKAYRHSGYPGGLRAVSYADLMAKHPERVVE
                     KAVKGMLPKNSLGRKTLGKLKVYAGPTHPHQAQQPQPYEIRQISQ"
     gene            700..>1017
                     /gene="rpsI"
                     /locus_tag="VFD73_24745"
     CDS             700..>1017
                     /gene="rpsI"
                     /locus_tag="VFD73_24745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009376128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HZI77185.1"
                     /translation="MRKSNVAEPTGVETPADDTAYFDTEYTAEENIDSEEAPSEYTTE
                     SPEAGAPRAARRPVVTGHASGLGRRKEAIARVRILPGTGQWKINGRTLEAYFPNKVHQ
                     QIVS"
BASE COUNT          208 a          326 c          330 g          153 t
ORIGIN      
        1 gcctggatgt gttttttaag cactgcagga catgggcatc gaaggcccca gggtggggta
       61 ttcttggggg atacacggca ggagagtctg cgcgcacttt ggcagcgagc gcggattcga
      121 gtatgctgca ttggcgtcat ccgcgacgag cagcattttc ccgctgcgct gacccggcac
      181 ttggatcttc ccgacagcag ggtcttgagg atcacgaacc acatgcgaag gctaaacgac
      241 tgtgcgcact ttcagcccga aggacagtga catcacgcgt cagtggcatg tcatcgacgc
      301 caccgacgtc gtgctcggcc gcctggccag ccatgtggcg gtgctgctgc ggggcaagca
      361 caagcccatt ttcgctccgc acgtcgacac cggtgacttc gtcatcgtga tcaacgcgga
      421 caaggtctcg ctgagcgggg ccaagctgga ggacaagaag gcctaccggc actccggcta
      481 cccgggcggc ctccgcgcgg tcagctacgc ggacctcatg gctaagcacc cggagcgggt
      541 ggtcgagaag gcggtcaagg ggatgctccc caagaactcc cttggccgca agacgctcgg
      601 caagctcaag gtctacgcgg gcccaacgca cccgcaccag gcgcagcagc cgcagccgta
      661 cgagatccgg cagatttccc agtagcgccg caaggaagcg tgaggaagag caacgtggcc
      721 gagcccactg gcgtagagac gcccgcagac gacacggcat acttcgacac ggagtacacc
      781 gccgaggaaa acatcgacag cgaagaagcc ccgtcggagt acacgactga gtctccggag
      841 gctggcgccc cgcgcgccgc gcgccgaccg gtggtcactg gtcacgccag tggccttggc
      901 cgccgcaagg aggctatcgc gcgcgtgcgc atcctgccgg gcacgggcca gtggaagatc
      961 aacggccgca cgcttgaggc ctacttcccg aacaaggttc accagcagat cgtcagc
//
LOCUS       DASRPQ010002186         1377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_880066, whole genome shotgun sequence.
ACCESSION   DASRPQ010002186 DASRPQ010000000
VERSION     DASRPQ010002186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1377
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_880066"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..889)
                     /locus_tag="VFD73_24750"
     CDS             complement(<1..889)
                     /locus_tag="VFD73_24750"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI77186.1"
                     /translation="MDIPGSNPSDSPTMVDALGSDSPTMIDGAPGPGKLQPPRIQRPQ
                     SNPSMLQPGAILGQRYEILQILGEGGMGAVYKARDRELNRMVALKVIRPDLAGHQAII
                     DRFKQELLLATQVTHKNVIRIYDLSEADGMKFITMEYVEGEDLRSLMIKKQGKLTPEE
                     AVEIMQQTCRALDAAHSAGIIHRDLKPQNIMRDKAGRILVMDFGLARTLEGDGMTQTG
                     ALVGTMDYMSPEQALGKDLDQRSDVFAMGLIFYELLTGKMPYKADSVVASLLKRTQER
                     AAPVSSHDASIPRPLSNIVG"
BASE COUNT          250 a          406 c          444 g          277 t
ORIGIN      
        1 tgcccacgat gttgctcaga ggccttggta tggaggcgtc gtggctcgaa accggcgccg
       61 cccgttcctg tgtgcgcttg agcaggctgg ccaccacgct gtcggccttg tacggcattt
      121 tgccggtcaa cagttcgtag aagatcaagc ccatcgcaaa gacgtccgag cgctggtcca
      181 ggtccttgcc gagggcctgc tccggggaca tatagtccat ggtgccgacc agagcgccgg
      241 tctgagtcat gccgtcgcct tcgagggtgc gggccagacc gaaatccatc accaggattc
      301 gtccggcttt gtcgcgcatg atgttctgcg gcttcaggtc acgatggata atccctgcac
      361 tgtgcgcggc gtccagcgcg cggcaggtct gctgcatgat ctcgacggct tcctctggag
      421 taagcttccc ctgcttcttg atcatcaggc tgcgcaagtc ctcaccctct acgtactcca
      481 tggtgatgaa cttcatgcca tcggcctcac tcaagtcgta gatccggatg acgtttttat
      541 gggtgacctg ggtggccagc agcagttcct gcttgaagcg atcaatgatg gcctggtggc
      601 cggccagatc gggccggatg actttcagcg ctaccatgcg attcagctcg cggtcgcgcg
      661 ctttgtaaac tgcgcccatc ccgccttcgc cgaggatttg caggatttcg tagcgctggc
      721 cgaggatcgc tcccggttgc agcatggacg gattgctctg gggcctctgt atccgcggcg
      781 gctggagctt gccggggcca ggagcgccat cgatcatggt gggagagtcc gagcccagcg
      841 cgtcaaccat ggtcggcgaa tccgagggat tgctgccggg gatgtccacg atggtcggag
      901 agtccgaggc ggggacgttt gtattctggc cgggaattcc gatcagggtt ggcgcgtccg
      961 agggcggagc aaccccgggg gacgagctgt cacctttgga aggcgtgcgt acgaccgcac
     1021 cgccttcacc aggttctgaa ggctttccat ccgggcggcc tcgggagaac tcttccatga
     1081 agaacgacct cggcccgtga cggggaacgg aagctcctaa aggcaacccc ggactagcac
     1141 acacgagccc aacccgcgga accagtgggg gggcagaggt ccgcaagttg accagtatat
     1201 aacgtagtct caccagtgtc agccgcccgt caccggggaa gtgaacaggc tggaaatgcc
     1261 atggaggacg ggcgtccccg cccggcagga gtatggcttg ttcctgacgg gcgggacgcc
     1321 cgtcctgcat caactcaggg catatatgat agggagcgaa aattgatgct aaccgtt
//
LOCUS       DASRPQ010002187         3677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_880199, whole genome shotgun sequence.
ACCESSION   DASRPQ010002187 DASRPQ010000000
VERSION     DASRPQ010002187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3677
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_880199"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..698
                     /locus_tag="VFD73_24755"
     CDS             <1..698
                     /locus_tag="VFD73_24755"
                     /inference="COORDINATES: protein motif:HMM:TIGR03317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA-modifying protein YgfZ"
                     /protein_id="HZI77187.1"
                     /translation="FRRQLPPRLAKVTDLTGQNSVAWLIGARGFQTLAESGVQVPEAS
                     GRVASVGGEVSPVALALAPEATYFVALAVGATPAVAALTSRLSSAGAVIGNERDLHAA
                     RILCGWPALGAEIDERTLPQEVRYDQIGGVSYTKGCYTGQETVARLHFRGHTNRELRG
                     LRWGRPESLQSRSIQKGEREVGSVRSTLTLEDRAIGLGLIRREVDVGEELLAGGQPAT
                     VVALPFGPDDLDG"
     gene            complement(700..870)
                     /locus_tag="VFD73_24760"
     CDS             complement(700..870)
                     /locus_tag="VFD73_24760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77188.1"
                     /translation="MKTILALSAALLIVGCQKRAATPAADTSAMAPAMSDTGMAGMTH
                     SDSTMARDTTKK"
     gene            1021..2484
                     /locus_tag="VFD73_24765"
     CDS             1021..2484
                     /locus_tag="VFD73_24765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium chelatase"
                     /protein_id="HZI77189.1"
                     /translation="MIEPRTIGELKNSRWAEAPLRGRTVRDEIRSNLLRRLETGEPLF
                     PGIVGYEDTILPQIINALLARHHFILLGLRGQAKSRLLRELTSLLDERIPIIAGSEVN
                     DDPFAPISKYARELLAECGEATPIAWLRRDQRYVEKLATPDVTIADLIGDVDPIKAAR
                     GGHLLSDELTMHFGLLPRANRGIFAINELPDLSGKVQVGLFNIMQEGDVQIKGYPVRL
                     PLDVLLAFTANPEDYTARGKIITPLKDRIGSEVITHYPRTVQLGMEITAQEAWTQRGG
                     PSLDIPDFILEVIERVAFEAREDKRVDKRSGVSQRLPISTLENAVSNAERRSVALNES
                     TVVPRVSDIYAAVPSITGKLELEYEGELQGGDIIARDLIRRAAGRVLEERMGGADLSK
                     VVAWFDQGGALKVSGDERSEICLKGFSVVPALLDLVNEFGLATRKDAARQVAACELVL
                     EGLAAQKRISRSEELGYTRAKPERREPGYGKGGISFG"
     gene            2671..>3677
                     /locus_tag="VFD73_24770"
     CDS             2671..>3677
                     /locus_tag="VFD73_24770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77190.1"
                     /translation="MRFTTYSKYHPELADAVNLQGLLDQLSDFLLQSGFAGNSPSFWH
                     DEMGEGERSLDALRQAILQALMDSGQLTPEMLKVLRGESTGDEARDKEIEGELSQLLD
                     RIVQRLMEEGYLNVSQAPQVPQGYQSLFGPGGQAHSAAQQVQFNLTEKGIDFLGYKTL
                     KNLLGSVGKSSFGAHDTPYLATGVEAEGVSKHYEFGDVLNLDVPATLTNAIAREGLGV
                     PLNIEYTDLMVSQSEYRSSAATVLMLDCSHSMILYGEDRFTPAKKVALALTHLIRTQY
                     PGDSLRVVLFHDSAEEIPLSALATAQVGPYHTNTAEGLKLARRILLGQKKDMRQIIMI
                     T"
BASE COUNT          733 a         1093 c         1178 g          673 t
ORIGIN      
        1 ttttccgacg acagctgccc cccaggctgg ccaaggtgac cgatctgacg ggtcagaaca
       61 gcgtggcatg gctgatcggg gctcgcggct ttcagacgtt ggcggaatcc ggcgttcagg
      121 tgcccgaagc ctcgggaaga gttgcatcgg ttggtgggga agtcagtccg gtagccttgg
      181 cgcttgcacc ggaggcgacc tacttcgtgg cccttgccgt cggggccacg cccgcggtgg
      241 cggcgctgac ttcgaggttg tcctcggccg gcgcggtgat cgggaatgag cgggacctcc
      301 atgccgcgag aattctctgt ggctggcccg ctctcggagc ggaaatcgac gagcgcacgc
      361 tgccgcagga ggtgcgctac gatcagatcg gcggagtgtc gtataccaag ggatgctata
      421 ccggacagga gacggtggcc cggctgcact ttcgcggtca caccaatcgg gagctgcgtg
      481 gtcttcgctg gggtcgaccg gagtcgctcc agagccggag catccagaag ggcgagcgcg
      541 aggtaggcag cgtacgctcc accctcactc tcgaggaccg cgccatcggc ctcggcctga
      601 ttcggcgcga ggtcgatgtg ggtgaggagc tgttagctgg tggtcaacca gctacggtgg
      661 tagccctgcc gtttggcccg gacgacttgg acgggtaggc tatttcttgg tggtatcccg
      721 tgccatcgtc gaatcggaat gcgtcatccc cgccataccg gtgtcggaca ttgcgggagc
      781 catggcggac gtatccgctg cgggagtggc ggcccgcttc tggcagccaa caatgagaag
      841 cgccgcgctc aaggccagga tcgtcttcat cgtcactcca tcgatgtggt cggcggtgag
      901 agaaccaggt gccaggccgt cactgtcgcc gggcagagac gcgaggcgaa gctactttcc
      961 tgcaggctgt tgtcaagtca gcgcagcatc aaccgcaacg aggattgagg tcgaaccaga
     1021 atgattgagc cacgcaccat aggtgaactg aaaaacagcc gctgggcgga ggctccgctc
     1081 cggggacgta ccgttcggga cgaaatccgg agcaatctgc tccggcgctt ggaaacaggt
     1141 gagcctctct ttccgggaat cgtcggatac gaggacacca ttctgccgca gatcatcaac
     1201 gcgctcctgg cccggcatca cttcattctg ttgggacttc ggggtcaggc caagagtcgg
     1261 ctgctccgcg agctcaccag cctgctggac gagcgaatcc cgatcattgc gggcagtgaa
     1321 gtcaacgacg atcccttcgc tcccatctcg aagtacgccc gcgagctgct ggccgaatgc
     1381 ggagaggcaa ctccgatcgc atggctgcgg cgggaccagc gctacgtcga gaagctggcc
     1441 acccccgatg tgacgatcgc cgacctgatc ggcgacgttg atccgatcaa ggcagcccga
     1501 ggcggtcatc tcctctccga cgagctgacg atgcacttcg ggctgttgcc cagggccaat
     1561 cgggggatct ttgcgatcaa tgagctgccc gatctgagcg gcaaagtgca ggtgggcctc
     1621 ttcaacatca tgcaggaagg agacgttcag atcaaaggct atcccgtgcg tctgccgctg
     1681 gatgtcctgc tggcctttac tgccaatccg gaagattaca cagcgcgggg caagatcatt
     1741 actccgctga aggaccggat cggctcagag gtgatcaccc attatccccg cacggttcag
     1801 ctcgggatgg agattactgc ccaggaagcc tggacccagc gcggtggtcc gtcgctcgac
     1861 ataccggact tcatactgga agtcatcgag cgcgtcgcct tcgaggcacg agaggacaag
     1921 cgggtagaca agcggtccgg cgtgagccag cggcttccga tcagcacgct ggagaatgcc
     1981 gtctccaatg ccgagcgccg gtccgtcgcc ttgaacgaat ccaccgtggt gcctcgggtg
     2041 agtgatatct acgcagccgt cccctcgatc accggaaagc tggaactgga gtacgaagga
     2101 gagctccagg gtggcgacat cattgctcgt gatttgatcc ggcgagccgc ggggcgcgtg
     2161 ctggaggaac gcatgggagg agcggacctg agtaaagtag ttgcctggtt cgatcagggc
     2221 ggcgccctca aggtttccgg tgacgagcgc tccgaaatct gcctcaaggg cttcagcgtc
     2281 gttcccgcgc tgctggatct ggtcaacgag tttgggctgg ccactcgaaa ggacgccgcc
     2341 cggcaggtcg cggcgtgtga actggtgctg gaaggccttg ctgcccagaa gcggatcagc
     2401 cggagcgagg agctcggcta caccagggca aagccagagc ggcgagagcc cgggtacgga
     2461 aaaggcggta taagcttcgg atgacgggca ggctcgaacc tacagtccag agtcgagagt
     2521 caaagccgga cgactgatgc cacgggacgt gggtcacgtc gcgtctctgg ctcacgcctt
     2581 attcattcga acatccagac tctggcaagc atccagactt tcgactctcg actctcgact
     2641 gttgccttga aaccctagcc acttccagca atgcgcttca cgacctactc caagtatcac
     2701 cccgagctcg ccgacgcagt caatctgcag gggctgctgg atcagttgag cgatttcctg
     2761 ctgcaatcgg ggttcgccgg caactcgcca tcgttctggc atgacgaaat gggagagggc
     2821 gagcggtcgc tcgatgcctt acggcaggcc attctacagg cgctcatgga ttcaggtcag
     2881 ttgaccccgg agatgctcaa ggtactccgc ggtgagtcca cgggagacga ggctcgggac
     2941 aaagagattg aaggggagct gagtcaattg ctggatcgta tcgtccagcg cctgatggag
     3001 gagggatacc tgaacgtgag ccaggcacct caggtacccc agggctacca gtcactgttc
     3061 gggcccggag gccaggcgca ctctgccgcg caacaggtcc agttcaacct gaccgagaag
     3121 ggcatcgatt ttctgggcta caagacgctc aagaacctgc tgggcagcgt tgggaaatcg
     3181 agcttcggtg ctcatgacac cccgtatttg gccaccggag tcgaggccga aggagtaagc
     3241 aagcactacg aattcggcga cgtcctgaac ctggatgttc ccgccacact caccaatgcg
     3301 atcgcgcgcg aggggctcgg cgtgccgctc aatatcgaat acacggatct catggtgagc
     3361 caatcggagt accgctcgtc agcggccacc gtgctgatgc tggactgctc ccactcaatg
     3421 attctgtacg gggaggatcg gttcacgcct gccaaaaagg tggcgcttgc cctcacccat
     3481 ctgatccgca cccagtaccc cggtgacagc ctgcgggtcg ttctgttcca cgattccgcc
     3541 gaggagattc cgctcagcgc gctggcaacg gcacaagtcg gaccgtatca caccaacacc
     3601 gccgaaggtc tgaaactggc ccgccgaatc ctgctgggtc agaagaaaga catgcggcag
     3661 atcatcatga tcaccga
//
LOCUS       DASRPQ010002188         1089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_261487, whole genome shotgun sequence.
ACCESSION   DASRPQ010002188 DASRPQ010000000
VERSION     DASRPQ010002188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261487"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..239)
                     /locus_tag="VFD73_24775"
     CDS             complement(<1..239)
                     /locus_tag="VFD73_24775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77191.1"
                     /translation="MRPDRVVANGEDVPLSPNGNGLHHGAERKPEPRPEPEVRPGGPG
                     ETGKEPRLDFLFRPKMPPRPPQQGEQFDAMWPKRRP"
BASE COUNT          206 a          351 c          341 g          191 t
ORIGIN      
        1 gggcgccgct tcggccacat ggcatcgaac tgctccccct gctggggcgg acgcggtggc
       61 atcttgggcc ggaacaggaa atcgagccga ggctctttgc cggtctcacc gggcccacca
      121 gggcgcactt ccggctcggg tctgggttcc ggcttgcgct ccgctccgtg gtgaagcccg
      181 ttgccatttg gagagagcgg aacgtcctcg ccgttggcga cgacacgatc cgggcgcacg
      241 gtcgatcgca ggcgctcaag cgcagagccc gacacgtcga tcgcagcagt cggggtcggc
      301 tcggctggtc ggggctcagg cggatgcagc tcggcttgac gcgattcgga ttggcgcggc
      361 tcagcttggc ccgactcaga ttggcgcagc tcagattggc gcgggtccgg tgggcgtgga
      421 tcaggcagac gcggtccagc gtccaacacg tcaggccgcc gctggctgtc cgatggctgc
      481 ctggcgtcag ctagacgcgg gatatgagcc gagggcctgg tcctgagcga ctccgcgatc
      541 acgttgagct ggctgatcag cgacccaagg cccatcacca tggggccacc gacgacagtg
      601 atcgcgcccg acatgattaa tgcctggccg agagccgaat cagcaacggc cgagccagac
      661 gcaattgcga ccacccccgc accggtgatc agaataccaa aaaccagcag gatcaaggac
      721 atcctggcac ccacccaatc ccaaaatacc cccgtagaat cggcgcaggc atatggttac
      781 tgagagtctg gcgccaatcc tatggttaag caatcgttaa tctggccaat ctggtaagga
      841 atccaatgat attggcgcct gggccacatg cgcgcaccgc gcgcatgggt gctggcgttc
      901 gcgtccggag gcccttctaa ccctcacagc cctgcatttt gctgcgccac catgcaatag
      961 agcatcggga tcgagaacat ggtgttgatc cgtgatgtca tgccggcaac tcgcgccgcc
     1021 ccggcctttt catcgggcga cgcctccacc atcccgagga ccttcttctg attgggccag
     1081 ataacaaac
//
LOCUS       DASRPQ010002189         1044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4648253, whole genome shotgun sequence.
ACCESSION   DASRPQ010002189 DASRPQ010000000
VERSION     DASRPQ010002189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4648253"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..695
                     /locus_tag="VFD73_24780"
     CDS             <1..695
                     /locus_tag="VFD73_24780"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI77192.1"
                     /translation="LDAGYCRHHDAVQPGPYVVISVADNGCGMDAATQARIFEPFFTT
                     KEIGKGTGLGLSTVYGIVKQSGGFIWVYSEPGRGSTFKVYFPRVVARADTLVPAATVT
                     EPIPGGSETILLVEDDPTLRELTQHFLHEAGYTVLLAENPAQALEAASASEASIHLLL
                     TDFVMPGMNGVQLASKIGAIRPDLKLLVMSGYASDQMAQRGDWCPGSNFLEKPFSRNE
                     LLAQVYKTLHHR"
     gene            complement(764..>1044)
                     /locus_tag="VFD73_24785"
     CDS             complement(764..>1044)
                     /locus_tag="VFD73_24785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77193.1"
                     /translation="NPSRLTPMWAMLMSGLMGIVVTGTTRRGKAMMCTLGAVVVMALA
                     LTTGCGSSPAPATQSLSQGPRVVQITASSNTGGGASNHQINLLITLLQ"
BASE COUNT          185 a          353 c          301 g          205 t
ORIGIN      
        1 aactcgacgc cggctactgc cgccatcatg acgccgtgca gcccggcccc tatgtcgtca
       61 tcagcgttgc cgacaacgga tgcggcatgg atgccgccac ccaggcccgc atcttcgaac
      121 cttttttcac caccaaggag attggcaagg gaaccgggct cggactctcc accgtctacg
      181 gcatcgtcaa gcagagcggc ggtttcatat gggtctatag cgagccaggc cgtggcagta
      241 ctttcaaggt ttatttcccc cgcgtagtcg cccgtgcgga tacgctcgtt ccggccgcca
      301 ctgtcacgga acccattccc ggcggcagcg agaccatcct gctggtcgaa gacgatccca
      361 ctcttcgcga actgacccaa cactttctgc atgaggccgg ttatacggtg ctgctcgccg
      421 agaacccggc gcaggctctc gaggccgcct cggcttctga ggcgtccatc catctgttgc
      481 tcaccgattt cgttatgccc ggaatgaacg gcgtgcagct ggcgtcgaag atcggcgcga
      541 ttcgtcccga tctcaagctg ctggtgatgt caggatatgc gagcgaccag atggcgcagc
      601 gcggagactg gtgtcccggc tcaaattttc tggaaaagcc cttctcccgc aacgagctcc
      661 tggcgcaggt ctacaagacg ctccaccatc gctgaggatt cccgctgcgt tagtggggga
      721 gggggcccgg cccttacgag ccgagccctg cacggttggc tgactactgc aacagcgtga
      781 tcagcaagtt gatctggtga ttggaagcgc ctccgcccgt attgctcgat gccgtgatct
      841 gcaccaccct cggcccctgg ctcaggcttt gcgtcgcggg cgccggcgaa gatccgcacc
      901 cggtcgtgag cgccagggcc atcaccacaa ccgctcccag ggtacacatc attgccttgc
      961 cgcggcgcgt cgtgcccgtc accacgatgc ccatcaggcc gctcatcagc atcgcccaca
     1021 tcggagtcaa ccggctcggg tttt
//
LOCUS       DASRPQ010002190         1009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3725595, whole genome shotgun sequence.
ACCESSION   DASRPQ010002190 DASRPQ010000000
VERSION     DASRPQ010002190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3725595"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            268..834
                     /locus_tag="VFD73_24790"
     CDS             268..834
                     /locus_tag="VFD73_24790"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI77194.1"
                     /translation="MPNDMQEAVALAHLSVATGSGDDDEEVSIPWPGVSDGMPRLLPV
                     PSAWWETPAVTTRALSARPEEARTARRFVREMLTCWGLEALADDAEMIVDELVVNAVL
                     HGTRAGLTRPGLGTGLTVLRLCMLRRAGEVMLAVVDPGNETPMPRQPDWGGESGRGLQ
                     IVGALSHVWGWSPIAGHGKAVWAVLRDP"
BASE COUNT          167 a          309 c          350 g          183 t
ORIGIN      
        1 catgccgttg taggtaatga ccatgtttat ccccttccga cagggtaacg catgtcaggc
       61 ctggctaaat cactcgctgt agtctccagt tggcaactgg tgagcaagtt gcctgatgcg
      121 ttctgcctgt ctgccggccc ccttttgcgc ctactcggag acctgtgcac aaagcgaatg
      181 aacgtgcatc tggtcttgca tttgcacaat atatcaggca acatgtcttt aagcacgcag
      241 ttaacaccgt gatgggcaag ggttttcatg cccaatgaca tgcaggaagc tgttgcgttg
      301 gcgcatctca gtgtcgctac cggtagcggg gatgacgacg aagaggtcag catcccctgg
      361 ccaggggtca gcgacggcat gccacggctg ctgccggtgc cttcggcctg gtgggaaacc
      421 ccggcggtaa cgacccgcgc gctgagcgcc cggccggagg aagccaggac cgcccgccgg
      481 ttcgtccggg agatgctgac ctgctggggc ctggaggcgc tggcggacga cgccgagatg
      541 atcgtggacg agctggtggt caacgccgtc ctgcacggga cgagggcggg cctgacccgg
      601 cccggcctgg gcactggcct gaccgtgctg cggctgtgca tgctcaggcg ggccggcgag
      661 gtcatgctgg cggtcgtgga tccgggcaac gagacgccca tgcccaggca gcccgactgg
      721 ggcggagaga gcgggcgcgg cctgcagatc gtgggcgcgc tcagtcatgt ctggggctgg
      781 agccccatcg ccgggcacgg taaggccgtc tgggccgtgc tccgtgatcc ctgagacctc
      841 gtgatcggcg agactccgcg ccctgcagct aggcgatccc cgagagcggc tcctcggccg
      901 cggtcacgag gacgtgctcg accagggcga tgaggacatc cttggccgac tctttgctgc
      961 gtgcgtcgca cagcacgatg ggcatgtccg gctcgaggtc cagggccat
//
LOCUS       DASRPQ010002191         1159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4016709, whole genome shotgun sequence.
ACCESSION   DASRPQ010002191 DASRPQ010000000
VERSION     DASRPQ010002191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1159
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4016709"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..270)
                     /locus_tag="VFD73_24795"
     CDS             complement(<1..270)
                     /locus_tag="VFD73_24795"
                     /inference="COORDINATES: protein motif:HMM:TIGR04519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAT-variant-translocated molybdopterin
                     oxidoreductase"
                     /protein_id="HZI77195.1"
                     /translation="MSLTVQQPESGRGADQRQGRAYWRSLEELANTPEFQEAVPREFP
                     FGAAEPADGMSRRSFVQLLGASIALAGLGGCLSRPREKILPYVSSP"
     gene            complement(274..930)
                     /locus_tag="VFD73_24800"
     CDS             complement(274..930)
                     /locus_tag="VFD73_24800"
                     /inference="COORDINATES: protein motif:HMM:NF025875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HZI77196.1"
                     /translation="MPALFSPHSNVVARRVVVLAVLLVVGVPLFLMWWVRTPNVTGKG
                     HTVAQPVPLFSHQIHVTGLQIDCRYCHYTVERTASAGMPSSATCLPCHNEVWRSGAIF
                     APIRASLATGRPIAWQRINRLPEYVYFNHAIHVNKGVACETCHGRIDQMSQVRQAAPL
                     TMSWCLDCHNQPERYLRPVDQMTAMGWKPAQGTQLALGRELKHRYHVQELTTCTTCHR
                     "
     gene            complement(934..>1159)
                     /locus_tag="VFD73_24805"
     CDS             complement(934..>1159)
                     /locus_tag="VFD73_24805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77197.1"
                     /translation="ISQTTEREALHLAQVLRMALHQGEPMSNGSRPESALVRSRRNEL
                     RKGNLRLAAMVAGGAAGGMLWRAWRRNHGP"
BASE COUNT          206 a          371 c          369 g          213 t
ORIGIN      
        1 cgggctcgac acgtagggaa ggattttttc tcgcgggcgg ctgaggcagc cacccagccc
       61 ggcaagagcg atgcttgcac caagcagctg cacgaaactc cggcggctca ttccatcggc
      121 aggttccgcc gcaccgaacg ggaattctcg aggcaccgct tcctggaatt cgggagtgtt
      181 ggccagctcc tcgagactgc gccaataggc ccggccctgc cgctggtccg cccctcgtcc
      241 gctctctggc tgctgcactg tcaggctcat acgtcagcgg tggcaggtgg tgcaggtggt
      301 cagctcctgg acgtggtacc gatgtttgag ctcacgtccg agggccagct gggtcccctg
      361 agccggtttc cagcccatcg ccgtcatctg atcgaccgga cggagatagc gctccggctg
      421 gttatggcag tcgagacacc agctcatggt cagtggcgcc gcctgacgta cctggctcat
      481 ctgatcgatc cggccgtggc atgtctcaca ggctacaccc ttgttcacgt ggatcgcatg
      541 attgaagtag acgtactcgg gcaggcgatt gatccgttgc catgcgatcg gtctgccggt
      601 ggccaggctg gctcggatcg gagcgaaaat ggctccgcta cgccacacct cgttgtggca
      661 ggggagacag gtagcggagg atggcatgcc ggccgaggcg gttcgctcta cggtgtagtg
      721 gcagtaccgg caatcgatct gcaagccggt cacgtggatc tgatgactga agagggggac
      781 gggctgcgcg acggtatgtc ccttgcccgt cacatttggg gttcgcaccc accacatgag
      841 gaacaacgga acccccacca ccagaagcac tgcgagcacg acgactcggc gtgccaccac
      901 attgctgtga ggggaaaaga gggccggcat ccgtcagggt ccgtgattcc tccgccacgc
      961 gcgccagagc attccaccgg cggcaccccc agccaccatc gccgccaatc ggagattgcc
     1021 cttccgtagc tcattgcgcc ggctccggac cagcgccgac tcaggccggg aaccgttgct
     1081 catgggttca ccctggtgca gcgccatcct gaggacctgc gccaaatgga gtgcctcgcg
     1141 ctcagtggtc tgagagatc
//
LOCUS       DASRPQ010002192         1692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2160852, whole genome shotgun sequence.
ACCESSION   DASRPQ010002192 DASRPQ010000000
VERSION     DASRPQ010002192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2160852"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            468..596
                     /locus_tag="VFD73_24810"
     CDS             468..596
                     /locus_tag="VFD73_24810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77198.1"
                     /translation="MNQLQSLCGQFVLAMGLISTGMTQREPYGFRDENEFQPNFAL"
     gene            657..1202
                     /locus_tag="VFD73_24815"
     CDS             657..1202
                     /locus_tag="VFD73_24815"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI77199.1"
                     /translation="MRGPAVCLRELTTDEAALVESLARSRTAAARRVERARIVWRASQ
                     SETPPSIAEALGLSAETVRRRIRRFNAEGLAALEDHYRTGRPATYAADAVATVIAAAL
                     TSPPRLGLPFAAWTLDRLAAYLLEHKGITMRRSRIDEILLREGLRWRRHETWFGERVD
                     PAFAEKRGGSRRPTPRHPRAA"
     gene            1220..>1692
                     /locus_tag="VFD73_24820"
     CDS             1220..>1692
                     /locus_tag="VFD73_24820"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI77200.1"
                     /translation="MGPLSAKSYLGRDLVRPHPSPAGRARQEIDYGRRGKGYIFGAFC
                     PATGAAFTRPYSGRGTAHWVAFLDEVEGWLPQDIERIYAIADNLSSHRTADVLLFMLA
                     HPRWEMVFQPKYAAYLNLIEPWWKVLRSLALAGRRFETWDEVTEAIAQATTCWDA"
BASE COUNT          327 a          535 c          546 g          284 t
ORIGIN      
        1 gtcatgcccc gtggctctgt gtgaaccatt cacaaccaca acccggccct ggttaagacc
       61 gaccagccag agcccggcgc gatcgaccga tcacccgctg acccggaggg gcgcactaac
      121 gtcatgggag gctggcagcc ccatgatcat ctgggacgat gacggtgcgg gttggctgtt
      181 gcgactcagg aaatgaccga caaatctctc ccccatctcc cgtagaggat gctcaaggat
      241 tggacccctt ggctgtaagc ttctacggga gatgggggag aagaagtgtg tcttgatcta
      301 ggaaatggag aatgattgac cgccaaagat ttcgttcgaa ccactgccaa gggttttcca
      361 agcgaacgcg acggaaaacc cgaaggcaag cacggacgaa acgaagtgag ttcgggctca
      421 cagagacaca cgaaatatct catgcgaatt cagccatgga atgacgcatg aaccaattgc
      481 aatctctctg tggccaattc gtcctcgcaa tgggcctgat ctcgacggga atgacccaac
      541 gagaacccta cgggtttcgc gacgagaacg aattccaacc caacttcgcc ctctaagtgg
      601 ttcatccggc atgtagtgga gtatgctggc ggcttctcgt tgtggggaga tataccatgc
      661 gtggcccggc tgtttgcctg cgcgagctga ccactgatga ggcggcattg gtggagagcc
      721 tggcacgatc gcggacggca gcggcgcgcc gggtcgagcg cgcccgcatc gtctggcggg
      781 ccagccagag tgagacgccg cccagcattg ccgaggcgct cggtctgagt gcggagacgg
      841 tgcgccggcg cattcgccgg ttcaacgccg aagggcttgc cgctctggag gaccactatc
      901 gcacgggacg cccggccacc tacgcggctg acgcggttgc gacggtgatc gccgcggcgc
      961 tgaccagccc gccgcgtctg ggtctgccgt tcgcggcgtg gacgctcgat cggctcgccg
     1021 cctacctgct tgagcacaag gggatcacca tgcggcgcag ccggattgac gagatcctgc
     1081 tcagggaggg cctgcgctgg cgccggcatg agacttggtt cggcgagcgg gtcgatcccg
     1141 cgttcgccga aaaaaggggc ggatcgagac gccctacacc gcgccacccg cgggcagcct
     1201 agtcgtctgc ctggacgaga tgggcccact cagcgctaag agctacctgg gccgagactt
     1261 ggtgcggcca cacccgtcac cggcgggccg ggctcgccag gagatcgact acgggcgacg
     1321 cggcaagggc tacatcttcg gcgccttctg tccggcaacc ggcgccgcct tcaccagacc
     1381 ctactcgggc cggggcactg cccactgggt ggcctttctg gacgaagtcg agggctggct
     1441 gccgcaagac atcgagcgga tctacgccat tgccgacaac ctgagcagcc accgcaccgc
     1501 cgacgtgctg ctcttcatgc tggcgcaccc gcgctgggag atggtgttcc agccgaagta
     1561 cgcggcctac ctcaacctca tcgagccatg gtggaaggtg ctacgctcgc tcgccctggc
     1621 cggacggcgt ttcgagacct gggacgaggt caccgaggcc atcgcgcaag ccaccacctg
     1681 ctgggatgcg ca
//
LOCUS       DASRPQ010002193         1886 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2160872, whole genome shotgun sequence.
ACCESSION   DASRPQ010002193 DASRPQ010000000
VERSION     DASRPQ010002193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1886
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2160872"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1874)
                     /locus_tag="VFD73_24825"
     CDS             complement(<1..1874)
                     /locus_tag="VFD73_24825"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI77201.1"
                     /translation="MGTGMLRLAGELPTGVLAATTVWWTGDLLGALLVTPVVLAWSNP
                     SRVEGPARRLLEIVVLSVGALAAAEVGFGRLAGVFRQVDYHYLLFPFVIWAALRFGTR
                     GAALMTLSVATAAVVHTVRGAGPFIGPTTTNTLLAVDCYLAAVAVTGLVLAAAVRWER
                     LEATRALTQSEERLRQALDAARMGTWVWSVKENSLTWDEKLRQLYGLSPGEEIRDYEQ
                     FLSRVYPEDRAFVAETVRRVLDGGGDLDYQFRIVLPGGQVRWIADQGEVRRNESGDPV
                     YLAGVCTDVTERRMTEERLRQAHRMESVGRLAGGVAHEANNQMSVVMGAAEFILHRRD
                     IPEAVRQDVEFIQKAAERTAAVTSQLLAFSRRQVLKPELLDLNQVVRKWEPVLRRLMG
                     EDCTVVLQLAAESSQVRADPGQLEQVLLNLALNARDAMPRGGTITVETFRAELTGGYA
                     RLKPGTSVRPGKYAVLAVSDTGHGMDRETLSHVFEPFFTTKGLGKGTGLGLATVYGIV
                     KQSDGYIWAYSEPGQGTTFKIYLPLKTGIIPAEVKMDMPRRTSRGEWILLVEDEAPVR
                     SVMRRSLEEAGYHVMEAETAAAALERFVESTDPISLVLTDVVLPGGNGRELADRIAEL
                     R"
BASE COUNT          345 a          644 c          572 g          325 t
ORIGIN      
        1 cgaagctccg ctatgcggtc ggccagctcg cgtccgttgc cgccagggag gacgacatca
       61 gtgagcacca gactgatggg gtcggtactt tcgacgaacc gctccagcgc ggcggcggcg
      121 gtctccgctt ccatcacgtg atacccagcc tcctccaatg atcgtctcat gacagatcgc
      181 acgggggctt cgtcctcgac cagaaggatc cactcgccgc ggctggtgcg ccgaggcatg
      241 tccatcttga cctcggccgg tatgatcccg gtcttgaggg gcagatagat tttgaaggtg
      301 gttccctgcc ccggctcgct ataagcccag atatatccat ctgactgttt gacgatgccg
      361 tagacggtgg cgagccccag tcccgtccct tttcccagtc ccttagtcgt gaagaacggt
      421 tcaaagacat gactcagcgt ctcgcggtcc atgccgtgcc ccgtgtccga cacggcaagc
      481 accgcatact taccgggacg cacagatgtg ccgggtttga gtcgggcata gccgccggtc
      541 agctcggccc gaaacgtctc gaccgtgatc gtgccgccgc gtggcatggc atcacgggcg
      601 ttgagggcaa ggttgaggag cacctgctcg agctgtcccg gatcggcccg cacctgggac
      661 gactccgctg ccaattggag tacgacggtg cagtcctcac ccatgagccg ccgaagcacc
      721 ggctcccact tccgcacgac ctggttcaga tccagtaact ccggcttgag cacttgacgt
      781 cggctgaacg cgagcagctg gctggtcacg gcggcggtgc gctccgctgc cttttggatg
      841 aactccacat cctgccgtac ggcttcggga atgtcccgcc gatgcaggat gaactctgcc
      901 gcacccatga ccacactcat ctggttgttg gcttcgtgcg ccaccccacc cgccaggcgt
      961 cccaccgatt ccattcgatg cgcctgacgg aggcgttcct cggtcatacg gcgctcggtg
     1021 acatcggtgc acaccccggc gagatacacc gggtctcccg actcgttgcg gcgcacctcc
     1081 ccctggtcgg cgatccagcg aacctgtcct cccgggagca cgatgcgaaa ctggtagtcc
     1141 aggtctccac caccatccag cactcgccgg accgtttcgg cgacaaaggc gcggtcctca
     1201 ggatagaccc gggagagaaa ctgctcgtag tccctgatct cttcaccggg gctgaggccg
     1261 tagagctggc gcaacttctc atcccacgtc agcgagttct ctttcaccga ccagacccag
     1321 gttcccatgc gggcggcatc gagtgcctgc cgcaaacgtt cttcgctctg ggtcagtgcc
     1381 cgagtggcct cgagtcgctc ccaccgaacc gcggccgcca gcaccagccc ggtgacggca
     1441 acggcggcga ggtagcagtc aacggcaagg agggtgttcg tggtggtcgg gcctatgaac
     1501 gggcccgcac cccgaaccgt gtgcaccacg gcagcggtcg cgacgctaag cgtcatcagg
     1561 gccgctcctc tggtgccaaa ccggagcgcc gcccagatga cgaacgggaa caggagatag
     1621 tgatagtcca cctgccggaa cacaccggcg agccggccga agccgacctc ggcggctgcg
     1681 agcgctccga ccgagaggac gacgatttcc aacagtcgac gggccggtcc ctccacccgt
     1741 gacgggttac tccacgccag aacgaccggt gttaccaaaa gggcacccag gaggtcaccg
     1801 gtccaccaga cggttgtcgc agcgagaacg ccggtgggaa gctcaccggc aagccggagc
     1861 atgccggtgc ccataacggc gctaca
//
LOCUS       DASRPQ010002194         3271 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2798097, whole genome shotgun sequence.
ACCESSION   DASRPQ010002194 DASRPQ010000000
VERSION     DASRPQ010002194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3271
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2798097"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..390
                     /locus_tag="VFD73_24830"
     CDS             <1..390
                     /locus_tag="VFD73_24830"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI77202.1"
                     /translation="LTPAELWARPGGAAAIGFHLAHLPGSLERLLTYSRSEALTPEQL
                     ARLAAERTVHEDRPELGPLVERLRAGLDEAIDYLRTVPENALLTPREVGRKRLPSTTL
                     GLIIHAAEHSARHAGQIVTLTKVVTAR"
     gene            400..1977
                     /locus_tag="VFD73_24835"
     CDS             400..1977
                     /locus_tag="VFD73_24835"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI77203.1"
                     /translation="MHEPVTLMHPDARDASPRAISSGLPADLLSQSAGRLRVLALLYA
                     FVFFMAGILPALLMPADRAMLFSSFIQWGPAVIGITIGLLVAVVIRSERFTLPVVMNL
                     GLVFEVASSYAIAAAEFGDPMQIQMHRGYLGLSWVAVWVVLFTVVVPTAPRRALIAAL
                     ASVSSVPVIIGLALASHPTTLHLDPAQFFFGLVFPYILVVGMAYVGARVIYQLGTEVK
                     RARELGSYRLEKKLGEGGMGEVWQARHRMLTRPAAIKLIRPRPVGDGAAGVTNEAVRR
                     FEREAQVIARLRSPHTVELFDFGRADDGAFYYVMELLEGLDTDTLVRRFGPLPPERAV
                     YILRQICHSLSEAQSCGLVHRDIKPANIFLCRYGEEYDFVKVLDFGIVGAVRDGADHG
                     TMETRENAIRGTPAFIAPEQAMGTELDWRADIYATGCVAYWLLTGQLVFTADTPMGYL
                     LKHAHDQPPAPSSRTDLPIPKPLEELVLSCLAKNPGDRPQSARELSQRLGTIPLAEEW
                     TQERAHQWWTTHRPSQV"
     gene            complement(2020..3024)
                     /locus_tag="VFD73_24840"
     CDS             complement(2020..3024)
                     /locus_tag="VFD73_24840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77204.1"
                     /translation="MRSLVVVAALVLAASPLFAQDNPFKLPKNKVSAIQVSYSYSGDM
                     QGTAERAISQDKVMSHETTTAKMFGKTSTTDRWTLTTPEWSYSADLTNKTGVKHPNVL
                     PFMEKAYDGLDGTSKQRLNQNLHDMAQILARAFGPGVLSAAAKGETKTYAGEKCDEHS
                     FAGFTVCSMHDAPSIPLHLQGDLFCVSFEETATSVKRADPPASEFNPPAGINFQNDTN
                     LANPDSMAKGFVTYLASQQLADSLAKAKAEMAKQAPASTASNGGASEKPAEMTPEQRE
                     QQRKACEQLQNFDLGKTMANATKSVVSEALNEVKQEKEAEAKNKAKDKIKGLFKKPHI
                     "
BASE COUNT          512 a         1066 c         1003 g          690 t
ORIGIN      
        1 ctcacgccgg cggagctgtg ggctcggccc ggaggtgccg cggcgatcgg ttttcacttg
       61 gcccatttgc caggcagctt ggagcggctc ctgacctatt cgcggagcga ggccctcaca
      121 cccgagcagc tggcccggct cgcggctgag cgcaccgttc acgaggaccg tcccgagcta
      181 gggccgttgg tggagaggtt gcgtgcgggc ctcgacgagg caatcgatta tctccgtacc
      241 gtcccagaaa acgcgctcct cactccgcga gaggtcggcc gcaaacggct tccctctacc
      301 accctcgggc tgatcatcca tgccgccgag cactcggccc ggcacgccgg ccaaatcgta
      361 acgctcacaa aagttgtgac ggcccgctag gactatctct tgcacgaacc cgtcaccctg
      421 atgcaccccg atgcgcgaga cgcctcgcct cgcgctattt cctcagggct ccctgccgat
      481 ctcctgagcc agtcggccgg acggctacgg gtgctggcac tgctctacgc gttcgtgttc
      541 ttcatggcgg gcattctgcc ggcgctcctc atgccagccg accgggccat gctcttctcc
      601 agcttcatcc aatggggccc ggccgtcatc ggcattacca tcggtttgct cgttgcggtg
      661 gtaattcgga gcgagcgatt caccctccct gtcgtgatga acctgggcct cgtcttcgag
      721 gttgcgagca gctatgccat tgccgccgcg gagttcggcg atcccatgca gatccagatg
      781 caccgggggt atctgggcct ctcctgggtc gccgtctggg tcgtactctt cactgtcgtc
      841 gttcccaccg ctcctcgccg tgcactgatc gcggcgctgg cgtcggtcag ctcggttccc
      901 gtcatcatcg gactggcgct cgcatcccac cctaccacac tgcacctcga ccccgcccag
      961 ttcttctttg ggctggtatt cccctacatc ctcgtggtcg gtatggctta tgtcggcgcg
     1021 cgggtgatct accagctcgg caccgaggtc aagcgcgctc gcgagctggg cagctatcgg
     1081 ttggagaaaa agctcggcga aggtggcatg ggagaggtct ggcaggcccg gcaccgcatg
     1141 ctgacccggc ccgcggccat caagctgatc cgccctcggc ccgtcggaga cggcgctgcc
     1201 ggcgtgacca atgaagcggt acggcggttc gagcgcgagg cgcaggtcat cgcccggctc
     1261 cgctcaccgc ataccgtcga gctgttcgat ttcgggagag ccgatgatgg agccttctac
     1321 tatgtgatgg agttgctcga gggcctcgac accgacaccc tggttcggcg cttcggaccg
     1381 cttcccccgg agcgagcggt ctatatcctc cgtcagatct gtcactcgct ctccgaagcg
     1441 cagtcatgcg gcctggtgca tcgcgacatc aagccggcca acattttcct gtgtcgctac
     1501 ggggaggagt acgactttgt gaaggtgctg gatttcggaa ttgtcggcgc agtgcgagac
     1561 ggagcggacc acggcaccat ggaaacgcgg gagaacgcga tccggggaac gcctgccttc
     1621 attgctccgg aacaggcaat gggaaccgag ctggactggc gcgctgatat ctacgccact
     1681 ggctgcgtgg cctactggct cctcaccggc cagctcgtgt tcaccgcgga cacgccgatg
     1741 ggctacctcc tgaagcatgc ccacgaccag ccgccagccc cgtcatcccg aaccgatctc
     1801 ccgataccaa agccgctgga ggaactcgtg ctctcctgtc tggccaagaa cccgggagac
     1861 cgcccgcagt cggcaaggga gctgtcgcag cgcctgggca caattccctt ggcagaagag
     1921 tggactcagg agcgggccca ccagtggtgg acgacgcacc ggccatccca agtctaggta
     1981 gttctgccct cgggcactcc gactgccccg ctgccccgct taaatatgcg gcttcttgaa
     2041 caaccccttg atcttgtctt tggccttgtt cttggcctcg gcttctttct cctgtttcac
     2101 ctcattcagc gcctcactca ccactgactt ggtggcgttg gccatcgtct tgccaaggtc
     2161 gaagttttgg agctgttcgc aggctttccg ctgttgttcc ctctgctccg gcgtcatctc
     2221 cgccggcttc tcactcgccc cgccgttgct ggcagtgctg gccggcgcct gcttggccat
     2281 ctccgccttg gccttcgcca gtgagtcggc cagctgctgg cttgccagat aggtcacgaa
     2341 tcccttggcc atcgagtcgg ggtttgccag gttcgtgtcg ttctggaaat tgatgccggc
     2401 aggagggttg aactctgatg cggggggatc ggcccgcttg accgaggtcg cggtttcctc
     2461 gaagctgacg cagaagaggt cgccctggag gtgcagcggg atcgacggcg cgtcgtgcat
     2521 cgagcagacg gtaaatccgg caaaggaatg ctcgtcgcac ttctcaccgg catacgtctt
     2581 ggtttcgccc ttggctgccg ccgagagaac gccgggaccg aaggcccggg caaggatctg
     2641 agccatgtcg tgaaggttct ggttcagccg ctgcttcgag gttccgtcca gcccgtcgta
     2701 cgccttctcc atgaacggta gcacgttggg gtgcttcact ccggtcttgt tagtgaggtc
     2761 ggcgctgtaa ctccattcgg gtgtggtcag ggtccaccgg tcggtcgtgc tcgtcttgcc
     2821 gaacatcttg gcggtggtgg tctcgtggct catgaccttg tcctgcgaga tcgcccgctc
     2881 ggcggtgccc tgcatatcgc cgctgtagga gtagctcacc tggatggcgc tgactttgtt
     2941 cttgggcagc ttgaaaggat tgtcctgggc gaaaagtggc gacgcagcca ggaccagggc
     3001 tgcgacgaca accaacgatc tcataatgac tccgggtggt tgggaacgag agaactcaat
     3061 gtacgtacga ttgcgtttgc tgcaagacgc tccgccgtgc atctcccaga ctgaatcttc
     3121 ttgcggctac attggggcgt ggaaggctcc tggactcgcg ccgtcaccct gctctggcga
     3181 gcactccggc tccgctgtcc caattgcggc ggcggaccgc tcttcaagaa ctggctacgg
     3241 atgcagctcc gctgcccgat ctgtggtatg c
//
LOCUS       DASRPQ010002195         1433 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2798101, whole genome shotgun sequence.
ACCESSION   DASRPQ010002195 DASRPQ010000000
VERSION     DASRPQ010002195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1433
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2798101"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..433
                     /locus_tag="VFD73_24845"
     CDS             137..433
                     /locus_tag="VFD73_24845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77205.1"
                     /translation="MPTGRPAPEAPAPEAVPPSLLAWAQAVDVSRLSDRTVRQVERFL
                     RGYRHMTLNDRQQEGFRLRDAVEAQVSPPPPVDAHPMDVLATVLAVRRKQLGIG"
     gene            1094..1321
                     /locus_tag="VFD73_24850"
     CDS             1094..1321
                     /locus_tag="VFD73_24850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77206.1"
                     /translation="MPILLIILIPLGALVIYAVAYDLRRRRRGDRTGHDISSAARLAR
                     TDTEAHGASGLGQGTNVGGVGGAGAGGGPGI"
BASE COUNT          245 a          476 c          456 g          256 t
ORIGIN      
        1 gataccgtga ggacgggcct agcggcgcag ctcctcacgg tacctggacc cggcgaggaa
       61 gagcggtgcc gcacggcgga ggtgcggaat gcgcaggcac tggtggcaac ggtcagcgca
      121 gccgagtcct gacgcggtgc cgacaggccg gcctgctccc gaggcgcctg ctcccgaggc
      181 agtgccgccg tccctgctcg cctgggcaca ggcagtggac gtgtcgcggc tctccgacag
      241 gactgtccgg caggtggaac gctttctgcg cgggtaccgg cacatgaccc tgaacgacag
      301 acagcaagag ggctttcggc tcagggacgc cgttgaggcc caggtaagcc cgccaccgcc
      361 agtggacgcg catccgatgg acgtcctcgc gacggttctc gcagtgcgcc gtaagcagct
      421 cggcatcggc taatcgagct gagcagtcgt gcattcttcc tgtaccagca aggtaggagc
      481 tgggtggaca gtgaatcacg tacgctcctg aaaaccccgg tcctcgtcac catctcccgg
      541 cctgtctccc gcaatctggc cgcgccctgt cctgtcccaa gccctccccc gaacccgata
      601 gctgccgaac ctgacggcag gcgggttctg tcaggggcgg cacagccgat cacgcagtga
      661 cgccgcggcg cccttgacag gttccggctg tcgtgcatac tcctacggtg gttcggggga
      721 ggccacccgc acttccgccc gcatgccgtc ttccggaagc tccagctaat agttttcaag
      781 ggagtacgta actccctgtc cagcagcgtt gctacctggg ctttcagcgg ccatacccac
      841 catgacaccc caagatcacc ccgtatatat cccgggcgat ctcaacccag gacgaggctg
      901 atgacccttc cggcggtccg ctttttcaag cgcggcaaat ccagagaaag cgactattcg
      961 gcggcagtct cttccccggt ttcgtcctgg gcgccgcacg gcgtagttgc cgcactttgc
     1021 tgctgcacaa agtcaaatgc tcaaactccg gtttgggggc atacgctgag aacacctccg
     1081 gaaggagatc acgatgccca tactactgat cattctcatc cccctcggcg ctctggttat
     1141 ctatgcggtc gcgtacgacc taaggcggcg gcgccgcggc gaccgcacgg gtcacgacat
     1201 cagctcggcg gcgcgcctgg cccgtacgga cacggaggcc catggtgcca gcggcctcgg
     1261 ccagggcacc aacgttggcg gggttggcgg ggccggtgcc gggggcggcc ccggcatctg
     1321 acggtcctcg tgtttcacgg gcaagggcgg agttgacctg ggttaacggc gtttcgtcag
     1381 tcctgttcgt ctatgtaagg acctcacggt gcgcgctgtg cgatgacaat ggt
//
LOCUS       DASRPQ010002196         2029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3425283, whole genome shotgun sequence.
ACCESSION   DASRPQ010002196 DASRPQ010000000
VERSION     DASRPQ010002196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3425283"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            37..1026
                     /locus_tag="VFD73_24855"
     CDS             37..1026
                     /locus_tag="VFD73_24855"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HZI77207.1"
                     /translation="MRIIVSRIIARQPDYAAALLIAIMGCRDITAPESESVPLLITAS
                     DSMPAAPFLAMAGDIAGCGVNYKDEVTALLVDSLLRTNPMAGAVAVGDVAYMHGSAKD
                     FLCYDASWGRFKARTWAVPGNHEYNQDTSATGYYDYFLGKGVNAGPMGTRGRGYYAFD
                     CAPGWRCYGMNGQRRIPEQTKWLAADLALHPTGCQLLWTHEPIYTSGAMPSWPKIRPW
                     MVEGMKRALDVVVTGHQHVALERTARIRPNLTLNAPLDAAVIDTAKGARHFIAGGGGD
                     LDGTEWLPTPKAYSEKRLGGLGILKLTLLPGRYMWEFLDVTGQVLDSGDEACR"
     gene            complement(1063..>2029)
                     /locus_tag="VFD73_24860"
     CDS             complement(1063..>2029)
                     /locus_tag="VFD73_24860"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="asparagine synthase C-terminal domain-containing
                     protein"
                     /protein_id="HZI77208.1"
                     /translation="ERFHTEHRERVIQPEETDVAFKDLLWHFDEPFSDPSFLPTYYLA
                     REARREVVVVQSGDGADESFAGYRKYSRMMRRIAVRRFLPDRLLSWVARVAETRLAPS
                     GWIRRLSAKYGYDPASMLAGFLTLTPCLMTSALEPHARGPLALAVRHYNPRDVITGLM
                     QKAPPEQVGMVNTLRYIDLKHTLAGDILVKVDRACMAVALEVRPVYLHRNMLELAGAI
                     PSGQLVDASHTKEVLKRAVETWLPSANVRRGKQGFLPPLGRWIQESSAAWWTGNSGGI
                     LPDLLDPSLLGSFRGKRADEAPKDPRAVLQLLLLGHWLNQWKPTG"
BASE COUNT          386 a          651 c          638 g          354 t
ORIGIN      
        1 aacaaagatc actaccgatg agcagagagg tttgccgtga gaatcatcgt ttccagaata
       61 atcgcgcgac agccggatta cgctgccgct cttctgatcg caataatggg ctgccgcgat
      121 atcaccgccc cggaatccga aagcgttccg ttgttgatca ccgcctcaga cagcatgccg
      181 gcggcgccgt ttctggccat ggccggtgac attgccggct gtggcgtgaa ctacaaggac
      241 gaggtgacgg cgctgctggt cgactccctg ctccgcacaa acccgatggc aggcgccgtt
      301 gcagtcggcg acgtcgccta tatgcacggg agcgcgaagg actttctgtg ctatgacgcg
      361 agctggggga ggttcaaggc ccggacctgg gccgtgccgg ggaatcacga gtacaaccag
      421 gacacgtcgg cgacaggata ctacgactac ttcctcggga agggtgtcaa cgccggcccc
      481 atgggcactc gcggccgcgg ctactatgcg ttcgactgcg ctcctggatg gcgctgctac
      541 gggatgaacg gccagcgccg aatcccggag caaaccaagt ggctcgccgc cgacctcgcg
      601 ttacacccca ccggctgcca gctgctctgg acccatgagc cgatctacac gtcgggtgcg
      661 atgccgtcgt ggcccaagat cagaccgtgg atggtagagg ggatgaagcg agcgctcgac
      721 gtcgtcgtca ccgggcacca gcacgttgcg ctggaacgga ccgcccggat ccgaccgaac
      781 ctcaccctca acgcacctct cgatgccgcc gtcatcgaca ccgccaaggg tgcacgacat
      841 ttcattgctg gcggtggcgg cgatctggat ggaaccgaat ggctgccgac acccaaggcc
      901 tacagcgaga agcgcctggg cgggctcggc attctcaagc tcacgttgct cccgggccgc
      961 tacatgtggg agtttctgga cgtcaccggc caggtgctcg attcgggaga cgaggcctgc
     1021 cgataaacat cggcctcgag cgacactgcg gattgggaaa gcttagccgg tgggtttcca
     1081 ctgattcagc cagtggccca gcagcaggag ctggagaacg gcccgcggat cttttggcgc
     1141 ttcgtcggcg cgtttccctc ggaagctccc aagcaaggac ggatcgagca gatccggtag
     1201 gataccgcct gaattcccgg tccaccacgc cgcgctagac tcctgtatcc agcggcccag
     1261 gggagggaga aatccctgct tgccccggcg aacgttggcc gacggcaacc aggtctctac
     1321 cgcccgcttc agtacctcct tggtgtggct ggcatcgacg agctgtccac tcggaatcgc
     1381 gccggccaac tccagcatat tccgatggag atagaccggc cgcacctcga gcgccaccgc
     1441 catgcaggcg cggtcgactt tgaccaggat gtcacccgcc agcgtgtgct tcaggtcgat
     1501 gtagcgaagg gtgttcacca tgccgacctg ctccgggggc gccttctgca tcagtccggt
     1561 gatcacgtcg cgggggttgt agtgccgaac cgccagagcg agaggtcctc gggcatgggg
     1621 ttccagcgcg gaggtcatca ggcacggtgt cagggtgaga aatcccgcca gcatagacgc
     1681 gggatcgtag ccatactttg ccgagagtcg gcggatccag ccgctgggag ccaaacgcgt
     1741 ctcggccacc cgggccaccc aggacagcag tcggtcggga aggaaccgtc gcaccgcgat
     1801 ccgtcgcatc atccggctgt acttgcggta gcccgcaaag ctctcgtccg caccatcgcc
     1861 cgactgcacc accacaactt ctctccgggc ctcccgcgcc aggtagtagg tcgggagaaa
     1921 ggagggatcg ctgaacggtt cgtcgaagtg ccacagcaga tccttgaagg caacatccgt
     1981 ctcttccggt tgtatcaccc gctcgcggtg ctcggtgtgg aatcgctct
//
LOCUS       DASRPQ010002197         1228 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1529975, whole genome shotgun sequence.
ACCESSION   DASRPQ010002197 DASRPQ010000000
VERSION     DASRPQ010002197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1228
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1529975"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            39..>1228
                     /locus_tag="VFD73_24865"
     CDS             39..>1228
                     /locus_tag="VFD73_24865"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HZI77209.1"
                     /translation="MPGQLLLAYDFPPMGGGISRWMGELAKRFPPGSLIVSTGQAEKG
                     RDADLMLPNRVDRLPIPSRRLRTVQGTVLWSRRVAAIARSVRPEFIWCGNLKPAGYPA
                     HWTRRQVGTPYGVLLHGGDLLILRHQIKRSLLKRRTARLLLISASVLVANSQWTAELC
                     RTLLEQIGIPFARERVRVVALGTDPAFFRPGPASDELRNQYGLNQGRWLLTVARLTHH
                     KGIDTGLHLLARLRTRYADLGYVVVGRGEELEQLKQLADRLGVADRVRFLTEVPDRDL
                     PAIYSSAVAYLGLSRVMEQRAEGFGIALLEAAACGLPVIAARTGGIPDAVREGETGVL
                     VDPGDLGQVEAAVSRVLDDPALASRLGQAGRRAVETFYNWDRVAADLEQIGREAGTRK
                     LLTGR"
BASE COUNT          208 a          358 c          420 g          242 t
ORIGIN      
        1 tgtgtgctcg gtcgcgccgc agggaatcga aatcaagcat gccgggtcag ctcctcctgg
       61 cgtatgactt tccgccgatg ggaggtggca tctcacgctg gatgggtgag ctggcaaagc
      121 gttttccccc ggggtcgctc atcgtctcga caggacaagc tgaaaagggc agagatgctg
      181 atctgatgct gccgaaccgg gtcgaccgct tgccgatccc gtcgcggcga cttcggacgg
      241 tgcagggcac tgtcctctgg tctcgcagag tggcggcgat tgcccgatcg gtcagaccgg
      301 agttcatctg gtgtgggaac ttgaagcctg caggctaccc ggcgcactgg actcgtcgcc
      361 aggtcggtac tccgtatggt gtgctcctgc atgggggaga tctgttgatt ctgcggcatc
      421 agatcaaacg atctctgctg aagcgtcgaa ccgcgcggct cctgttgatc tctgcttcag
      481 tgttggtggc caacagccag tggacggccg agctgtgccg gacactgctg gagcagatcg
      541 gcatcccgtt cgcccgcgag cgagtgcgcg tcgtggccct aggtactgac ccggcgtttt
      601 ttcgtccagg tccagcgtcc gatgagttac ggaaccagta tggcctgaat caaggccgct
      661 ggctgctcac ggtcgcccgc ctcacgcatc acaaaggaat cgataccggg ctgcaccttc
      721 tggcccgcct gagaacgcgc tacgccgatc ttgggtacgt ggtcgtcggc aggggcgagg
      781 agttggagca actgaagcag ctggccgatc ggctcggtgt ggccgacagg gttcggttcc
      841 tcactgaggt tccggaccgg gatcttcccg ccatctacag ttccgcggtg gcatacctgg
      901 gcctatcgcg agtcatggag cagcgggccg aaggcttcgg tatcgccctg ttggaagcag
      961 ccgcctgcgg cctcccggta atagctgccc ggaccggcgg cattcctgac gcagtacgtg
     1021 agggtgagac cggagtgctg gtggatcctg gggatctcgg tcaggtcgag gcagcagttt
     1081 ccagagtgct cgacgatccc gcgctggcca gtcggctggg gcaagcggga cggcgagcag
     1141 tagagacatt ttacaattgg gaccgggttg cggccgacct ggagcagata ggacgcgagg
     1201 ctggcacacg gaagctcctc accggccg
//
LOCUS       DASRPQ010002198         2794 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1530010, whole genome shotgun sequence.
ACCESSION   DASRPQ010002198 DASRPQ010000000
VERSION     DASRPQ010002198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2794
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1530010"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(161..1018)
                     /gene="larE"
                     /locus_tag="VFD73_24870"
     CDS             complement(161..1018)
                     /gene="larE"
                     /locus_tag="VFD73_24870"
                     /inference="COORDINATES: protein motif:HMM:TIGR00268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent sacrificial sulfur transferase
                     LarE"
                     /protein_id="HZI77210.1"
                     /translation="MTSPVNRRLTGELSAAAGKVASLLKAAGPLGVAFSGGVDSSVLL
                     ALAVRALGADHVVAILGVSPSLGSDERFAAHQVAAFIGARLIEVRTREAEDPDYQANG
                     PDRCFHCKNELFTRIADEVAGAHNLKAVAYGENADDAMRPDRPGSRAATSHQVLRPLA
                     EAGIGKATVRAIARALQLPSADKPAAPCLASRIPHFQEVSAAKLGQIEAAEKALRDLG
                     FAELRVRHHGEVARIELPVGDLVRAVTAPVREQIHAAVIAAGFQFVALDVRGIQSGAF
                     TLTVLRSHD"
     gene            complement(1503..2639)
                     /locus_tag="VFD73_24875"
     CDS             complement(1503..2639)
                     /locus_tag="VFD73_24875"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HZI77211.1"
                     /translation="MLDDVTLWSYNFTLTITETRVVLMARVHPQELRTVLVGYGVGGS
                     VFHAPLINGLRGIKLHAIVTKNPERQAAALRRYPSVRVYDDVVRAFDKADCDLAVISI
                     PNRYHVDVANLALRAGLNVVVDKPLAGSAAQARMLFEHADREGLIITAYHNRRWDGDF
                     LTVTKLIRDGRLGIVRRFESRFERWRPTVVSDSWKESASVEDLGGVLYDLGVHLIDQA
                     VCLFGRPSHVYAELDHRRDKTVVDDDSYVALTHKNGVRSHLWMSSVASDIGPRFRVLG
                     SEASYIKNGMDCQATALQSGETPGGENWGAEPPAAWGLLGTPESSKRIPTLRGNYQAF
                     YSGIIPAITQGHALPVAMNDVIDALDVIEAAQRSAQYNRIEEIG"
BASE COUNT          535 a          872 c          824 g          563 t
ORIGIN      
        1 cagggtcggc gtgccagacg ccttgatggc acgagcgacc gcggtcacct gcgcgggtgt
       61 cttgccctcg cagtacaccg cctcgggata cccgcggcgg cgcacccggt catggtccat
      121 ttcgatgaat gcggccatgg cctcgtcggg tcgccagtgc tcagtcatgt gaccggagca
      181 ctgtcagggt gaacgcaccc gactggatcc cccgcacatc aagcgcgacg aactggaaac
      241 cggcggcaat tacggccgcg tggatctgct cccgcaccgg ggcagtgacc gccctgacga
      301 ggtcgccgac ggggagctcg atgcgcgcca cctcgccatg gtgacggacg cgcagttcgg
      361 cgaatcccag gtcccgcaga gccttctctg ccgcctcgat ctgaccgagc ttggccgcgg
      421 aaacttcctg gaagtgaggg atgcgggacg ccaggcacgg ggcggctggc ttgtcggcgc
      481 tgggcagctg cagagccctg gcgatggcgc gcaccgtagc cttgccgatc cccgcctcgg
      541 cgaggggccg cagcacctgg tggctggttg ccgcgcggga gccgggccgg tcggggcgca
      601 tcgcatcgtc agcattctcg ccgtaggcca cggccttcag gttgtgcgct ccggccacct
      661 cgtctgctat acgggtgaac agctcgtttt tgcagtggaa gcagcgatcg ggtccgttgg
      721 cctggtaatc cgggtcctcc gcttccctgg tccgcacctc gatgagccgg gccccgatga
      781 acgcggcgac ctggtgtgcc gcgaagcgtt catccgatcc gagactgggc gagacgccaa
      841 ggatggcgac gacatggtcc gccccgagtg ctcttacagc cagggctagc aggaccgagg
      901 agtcgactcc gccggagaac gcgacgccga gcgggcctgc tgccttgagc agggaggcta
      961 ccttcccggc ggccgccgaa agctcaccgg taaggcgccg attcaccggg ctggtcatct
     1021 cgggtcacct cagctgcatt cttgcctgct cggtgaccat tctgcctcat gtcgcgttct
     1081 ccccccgcga ggggccaagg cgctgcgaac aggttgccgc agtggggcgg agcacgcatc
     1141 gctccctccc ggcggctaca gcagcgtctg caacagcttg gcggcgccct cagaggcgtc
     1201 gagatcatgt ccgcggcttc cagtagttcg gcgggcgcct catcgctgcg caccgcgatc
     1261 cgggttgtgg cgatcccccg ggcggccaac tggtcgagcg cagcgaacgc agccaggtcg
     1321 ggatcgaagg ccacagcccg ataggcggat ataccttcga accaccgtgg tcccgagcca
     1381 caggcttgag gtcgtgtttc cccgctgcag acacgggttg ccgcgagcct gacgcatcgc
     1441 tgggaccgcc ccagctgcct attagcgata tgtaccattt ggttgcgaag caacaaatat
     1501 agctacccta tttcttctat tctattatat tgcgctgaac gctgggcagc ttcaattaca
     1561 tcaagtgcgt cgatcacatc attcattgcc accgggagag catgaccttg cgtgatagcc
     1621 ggtataattc ccgaatagaa ggcttgatag tttccacgca atgtcggaat tcttttactc
     1681 gattccggag tcccaagaag tccccatgcg gcaggtggtt cggcgcccca gttctcgccg
     1741 ccaggggttt cgccactctg aagagcagtc gcctggcaat ccattccatt ctttatatag
     1801 ctggcctcgc ttcccagaac ccggaaacga ggacctatat cgctcgcgac cgaagacatc
     1861 catagatgtg agcgaacccc gtttttgtgc gtcaaggcaa cataagaatc atcatctacc
     1921 accgtcttgt ccctgcggtg gtcaagctcc gcatacacat gagaaggtct cccgaaaagg
     1981 caaaccgctt gatcgatgag atgaactccc aaatcgtaga ggacaccacc cagatcttct
     2041 acacttgctg attctttcca gctgtcgctg actacagtgg gccgccatcg ttcaaaccgg
     2101 gattcgaaac ggcgcacgat gcccagcctg ccgtcccgga ttagctttgt tacggtaagg
     2161 aaatcaccat cccaacggcg attatggtaa gcagtaatta taagaccctc ccgatctgca
     2221 tgttcaaaga gcatacgagc ctgggccgcg cttcccgcca gaggcttatc tactactaca
     2281 ttcaggccag cccgtagtgc aaggttggca acatctacgt gatatcgatt ggggatacta
     2341 ataactgcca agtcgcagtc agctttgtca aatgccctga ccacgtcatc gtaaacgcgt
     2401 accgatggat agcgcctgag cgcagcggcc tgacgctcgg gattcttggt aacaatggcg
     2461 tggagcttaa ttcccctcaa gccgtttatt agcggggcat ggaagacgga accaccgact
     2521 ccgtagccga cgagtaccgt gcgtagctcc tgaggatgca ctctcgccat gagtaccacc
     2581 ctagtctccg tgatggtcaa tgtgaagttg taggaccata acgtcacgtc atcgagcatg
     2641 actaagcctc gatcactgac cgatgatgcg ctggggcgcc aacgccgttt agtgatattg
     2701 accgcttccg ggccgtgggc tgatttgctg tttactgttt tcctgcggca tatcctgtag
     2761 tgcagtcgcg ttctcacggc ctggagctgc tata
//
LOCUS       DASRPQ010002199         1019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4017396, whole genome shotgun sequence.
ACCESSION   DASRPQ010002199 DASRPQ010000000
VERSION     DASRPQ010002199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4017396"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..669)
                     /locus_tag="VFD73_24880"
     CDS             complement(<1..669)
                     /locus_tag="VFD73_24880"
                     /inference="COORDINATES: protein motif:HMM:NF012589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY family carbohydrate kinase"
                     /protein_id="HZI77212.1"
                     /translation="MSLRTLAPDSIVTGWDFSTGAVKCLAFDLAGKVVAEARFPTDLW
                     TEGGVSELNLMQLEGQARATTRAIAAKLSEMDVRMRRWVAGGISATHHTAGRVDRFGN
                     PVRRAICWNDQTLARYHAMGQERLGGPEAVKKLIGGPWAVRYSLSHLVKDEETLSDAD
                     WMATAFILPHGPLAAGYLTGRFDCTSISSAASTGIMDLRTNWWRKDMLNCLAKPEHRD
                     AVWKT"
     gene            complement(812..>1019)
                     /locus_tag="VFD73_24885"
     CDS             complement(812..>1019)
                     /locus_tag="VFD73_24885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI77213.1"
                     /translation="GSMMPRDLMPETMRRISHVTPHAWALDAYQQLLLNPDPNLGIVA
                     GGCGALVAFGAGFLALAWRLMRMD"
BASE COUNT          189 a          344 c          305 g          181 t
ORIGIN      
        1 cgtcttccaa actgcatctc ggtgctccgg cttcgcaagg caattcagca tgtccttgcg
       61 ccaccagttg gtgcggagat ccatgatccc cgttgaggca gccgacgaga tactcgtgca
      121 gtcgaaccgc ccggtcagat agccggccgc aagcggaccg tgcggcagga tgaacgcggt
      181 tgccatccag tccgcgtcgg agagcgtctc ctcgtccttg accaagtggc tcaaagagta
      241 gcggacggcc caaggtccgc cgataagctt cttcacggcc tctgggccgc cgagccgctc
      301 ttgccccatc gcgtggtatc tcgccagcgt ctggtcgttc cagcagatgg cccggcggac
      361 cgggttaccg aatcggtcca ctcgaccggc cgtatggtga gtggctgaaa tgccacccgc
      421 cacccagcgg cgcattcgaa catccatctc ggaaagcttc gccgcaatcg cccgcgtcgt
      481 cgcccgcgcc tgtccttcga gctgcatcag gttcagctca gagactccgc cctcggtcca
      541 caggtcggtc gggaaccggg cctcggcgac gaccttcccg gccaggtcga aggccagaca
      601 cttgaccgcc ccggtgctga agtcccagcc ggtgacgatc gaatcgggcg caagcgtgcg
      661 gagagacata aggagttaac cacagaggca cagaggcacc gagacgacaa gaaagacagg
      721 tctaaaggca gatcaccaag ccatgtcatt gctttatgaa ctgccttctt gtcttctcgg
      781 tgcctctgtg cctctgtggt taattgctta ttcagtccat gcgcatcagc cgccaggcca
      841 gggccaggaa cccggccccg aaggccacga gcgccccgca ccccccggcc acgattccca
      901 ggttcgggtc cgggttcagg agcaactgct ggtacgcgtc cagggcccag gcgtgcgggg
      961 tgacgtgact gatccgccgc atcgtttccg gcatcaggtc gcgcggcatc atcgacccg
//
LOCUS       DASRPQ010002200         3575 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_564685, whole genome shotgun sequence.
ACCESSION   DASRPQ010002200 DASRPQ010000000
VERSION     DASRPQ010002200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3575
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_564685"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..556)
                     /locus_tag="VFD73_24890"
     CDS             complement(<1..556)
                     /locus_tag="VFD73_24890"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HZI77214.1"
                     /translation="MLLVLDNYDSFTYNLVQYAGELGAEPIVYRNDALSPVEALELRP
                     EAIVISPGPCTPAEAGISVPLVQAAAGLVPILGVCLGHQAIAQAFGGEVVRAERLMHG
                     KTTSVEHSGHSLFQDIASPLEVMRYHSLVVSPARFPSELEVIAWSADRPSGHEIMALS
                     HRTLPIFGVQFHPESIATQHGKRLL"
     gene            complement(560..1294)
                     /locus_tag="VFD73_24895"
     CDS             complement(560..1294)
                     /locus_tag="VFD73_24895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77215.1"
                     /translation="MRNYWLRIVLGAVAIFSVGMIGVTLARQSVGRVRGVVEGSGPIT
                     LPIAFVPFTLDGQRLGNVNKIVLHRDAPKQIASVELQIKLADSTLARGLGGCRLAANF
                     DEQHPTHGSHIGIGPLSHGVFTCLHQNDSTPDLQEFGHAIFQPGAVTVPLFLPKDIAD
                     DLQRGDFNSEPDDSMSDKIEAAADSAADLAERKADSISAEAEKAATRAVAQQHRLLDS
                     LRQEGRRRQDSTRHTVRVSRDSNRSR"
     gene            1385..2119
                     /locus_tag="VFD73_24900"
     CDS             1385..2119
                     /locus_tag="VFD73_24900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI77216.1"
                     /translation="MIEVDGLQKLYGNFPAVQGLSFNVGPGEVLGLVGPNGAGKTTTI
                     RSIAGIIIPTSGRICIAGHDLSRDPVAAKAALAFIPDEPHLFEYLTVDEHLHFIARLY
                     RLGDVTARIPDLLAELDLADKRGALPGELSRGMKQKLAIACGLLHEPRALLLDEPLTG
                     LDPVGIRRMKRTIMRRAAEGAAIILSSHLLHLVEEICTRVLIMQRGNVVAFGTIAEIL
                     EGRPDLQSRNLEDVFLALIGQEESND"
     gene            2119..>3575
                     /locus_tag="VFD73_24905"
     CDS             2119..>3575
                     /locus_tag="VFD73_24905"
                     /inference="COORDINATES: protein motif:HMM:NF028272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative ABC exporter domain-containing protein"
                     /protein_id="HZI77217.1"
                     /translation="MIGVFAYLTWRSAQNRLVRQLHHLRSPRYLAALLFGLAYLWIMV
                     LSQRPTPAAAGIPDRRVLELIGALALLGAVAWGWVFGVERRVLAFSPAEVTFLFSGPV
                     SRRGLIQFKLLRSQLLILFNALLWTLILSRERFGISAWLRVISIWVMLTTLSFHRLGA
                     SFVRTSLAEHGRLGLRHRVVSLLVLGFVVIACAVSIADAWPHLVAARAEGVQALLQAA
                     ADAAEHPLARAVTYPFRIMVRPLAAGTPGEWLRALWPALILMILHYVWVVRSDTAFEE
                     AAAEVSLRRARSLSQGGRTARWFVDARSISRPLIRLSPSGWPAGAILWKNLMAATRTR
                     RIRNAALTLCGAGAMVTVLSFGPEGNLAEIAGWLALVWGGLTIVTGPQYVRNDLRGDL
                     LKLDLLRSYPLRGRSVVLAEAAASTLMLTGVQFSLILVAYLAFLGNRTMLPDLEERTL
                     LLLMVFVCLPPINLLSMLIQNGAALLFPAWVKLGSG"
BASE COUNT          610 a         1112 c         1123 g          730 t
ORIGIN      
        1 ccagcaaccg cttcccgtgc tgtgtggcaa tggactcggg atggaactgg acgccgaaga
       61 tcgggagcgt ccggtgggag agagccatga tctcgtggcc cgaagggcga tcagccgacc
      121 acgcgatcac ctcgagctca gatggaaagc gcgctggcga gacgaccaac gagtggtacc
      181 gcatcacttc cagtggcgag gcgatgtcct ggaagagact atgccccgaa tgttcgaccg
      241 aggtcgtctt gccgtgcatc aggcgttccg cccggactac ctctccgcca aacgcctgcg
      301 cgatggcctg atgcccaaga cagacaccca gaataggaac cagtcctgcc gccgcctgaa
      361 ccagtggaac cgaaatgccc gcctcggcgg gagtacacgg gcccggggag atgacgatcg
      421 cctcgggtcg aagttccagc gcttcgaccg gggacaaggc gtcattgcga tacacgatgg
      481 gctcggcccc cagctccccg gcatactgca caaggttgta ggtgaagctg tcgtagttat
      541 ccaggacgag aagcattgat taccgcgagc gattgctgtc tcgagatacc cgcacggtgt
      601 gccgggtgga atcctgccgc cgccgccctt cctgccgcaa cgaatcgagc agtcgatgct
      661 gctgagcgac ggctcgggtg gccgctttct ccgcctccgc cgagatggaa tcggccttcc
      721 gctcagccag atcagccgcg gagtctgctg cggcttcgat cttgtcgctc attgaatcgt
      781 caggctcgga attgaagtcg ccccgctgga gatcgtcggc gatgtccttg ggcaaaaaga
      841 gcggcaccgt cacagctccc ggctgaaaga tcgcatggcc aaactcctgg agatcgggag
      901 tgctgtcgtt ctggtgcagg caggtgaaga ctccgtggga aagcgggcct atcccgatat
      961 gggaaccatg cgtcgggtgc tgctcatcga aattcgccgc caaccggcat cctcccagac
     1021 cgcgggccag cgtcgagtcc gctagtttga tctggagctc caccgatgcg atctgcttcg
     1081 gcgcgtcgcg gtgcaacact atcttgttga cgttgccgag cctctggcca tcaagcgtga
     1141 aagggacgaa ggcaatcggg agggtaatcg ggccgcttcc ctcgaccaca ccgcggaccc
     1201 gaccgacgct ctggcgggct agcgtcacgc caatcatccc aacactgaag atggcgacag
     1261 ccccaagtac aattcgcagc caatagtttc gcataagttc ggcctgttca tccggtgcta
     1321 tgttccgata tgggacgtag tctgggtgtc ggaagtttca ccgggagccc agccagggac
     1381 atccatgatt gaagtggatg ggttacagaa gctttatgga aactttcccg ccgtccaggg
     1441 gctctccttc aatgtagggc ctggcgaggt gctggggttg gtggggccca atggggccgg
     1501 caaaaccacc accatccgaa gcatcgcggg catcatcatt ccaacctcag gacgaatttg
     1561 cattgccgga cacgatctgt cgcgggatcc ggtggcagcc aaggcggcgc tggccttcat
     1621 tccggacgag cctcacctct tcgaatatct cacggtcgac gagcacctgc acttcatcgc
     1681 ccgactctat cggctgggtg atgtcaccgc gcgaattccc gacctgctgg ccgagctgga
     1741 tctggccgac aaacgaggag ctctcccggg cgagctgtcc cggggaatga aacaaaagct
     1801 ggcaattgcc tgcggccttc tccacgagcc gcgagcgctg ctgctggacg agccactgac
     1861 tggcctggat cccgtcggca tacgacggat gaagcggacc atcatgcggc gcgcggcgga
     1921 aggcgccgcc attatcctga gctcgcactt gctgcatctg gtggaggaga tctgcacccg
     1981 ggtgctcatc atgcagcgtg gcaacgtggt ggccttcgga accatcgcgg agatcctcga
     2041 gggacgcccc gaccttcagt cgcgcaatct ggaagacgtg ttcctggcgt tgattggcca
     2101 ggaggaatcc aacgactgat gatcggggtc ttcgcctatc tgacgtggcg ctcggcgcag
     2161 aaccggctgg tccggcagct tcatcatctc cgtagccccc gctatctggc agctctcctg
     2221 ttcggcctcg cttacctctg gatcatggtg ctgagtcagc gaccaactcc tgccgccgcc
     2281 ggcatacctg atcgccgcgt tctcgagttg atcggcgcac tggctttgct cggcgccgtg
     2341 gcgtggggct gggtttttgg ggtagagcgc cgggtgctcg cgttcagtcc cgcagaggtg
     2401 accttcctct tctccgggcc ggtttcgcgc cgtggcttga ttcagttcaa gctgctccgg
     2461 agccagttgc tcatcctgtt caatgccctg ctctggactc tgatcctgtc tcgcgagcgg
     2521 tttggcatct ctgcctggct ccgggtgatc tcgatctggg taatgctcac cactctttcg
     2581 tttcatcggc tcggagcctc gttcgttcgg accagcctgg ccgagcacgg ccgcctcggg
     2641 ttgcggcacc gcgtcgtgtc tctgctggtg ctcggttttg tcgtcatcgc atgtgccgtg
     2701 agcatcgccg atgcctggcc ccatctcgtt gccgcccgag ccgaaggggt ccaagcattg
     2761 ctgcaggcgg ctgccgatgc tgcggaacat ccgcttgcgc gcgcagtgac ttaccccttt
     2821 cgcatcatgg tccgtcctct cgccgcgggc acacctggcg aatggctgag ggcactctgg
     2881 ccggcgctca tccttatgat cctgcactac gtctgggtag tccgttccga cacggcgttc
     2941 gaggaggcgg cagcggaggt ctcgttgagg cgggcccgga gcttgtctca gggaggacgc
     3001 acggcgagat ggtttgtgga tgctcggagc atcagccgtc ctctcatccg gctctcgcct
     3061 tcgggctggc cggcgggggc gatcctctgg aaaaatctga tggccgcaac gcgaacgcgc
     3121 cggatccgaa acgcggctct caccctctgc ggcgctggtg ccatggtcac ggtgctgtcg
     3181 tttggacccg aggggaatct tgcggagatc gcgggctggc tcgcgctggt atggggtggc
     3241 cttacgattg tgaccggtcc gcagtacgtc cgcaacgatc tacgaggaga cctcctcaag
     3301 ctggatctgc tcaggagcta tccgctccgg ggccggtcgg ttgttctcgc ggaagcagcc
     3361 gcgtccaccc tgatgctgac cggggttcag ttcagcctca tcctcgttgc ctacctggcg
     3421 ttcctgggaa atcgaacgat gctgcccgac ctggaggaac ggacgctcct cttgctcatg
     3481 gtatttgtgt gcctgccgcc gataaacctg ttgagcatgc tgattcagaa tggagctgca
     3541 ctgctcttcc ccgcctgggt gaagctgggc tccgg
//
LOCUS       DASRPQ010002201         3168 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_564730, whole genome shotgun sequence.
ACCESSION   DASRPQ010002201 DASRPQ010000000
VERSION     DASRPQ010002201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3168
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_564730"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(112..573)
                     /locus_tag="VFD73_24910"
     CDS             complement(112..573)
                     /locus_tag="VFD73_24910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77218.1"
                     /translation="MSNWGATQRVAARVLLAEGVVLAGDLHLLARATSPTESESPLEM
                     LNRDDPFFALTLAEGGVAFVSKAQVAVVSCRELGHADDPARASAAKRVELTVQLTDGV
                     EYRGRSSFELPPSRNRALDYVNAPGAFFALWTDDIVQFINKSLVRLIRPLD"
     gene            complement(640..1533)
                     /locus_tag="VFD73_24915"
     CDS             complement(640..1533)
                     /locus_tag="VFD73_24915"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HZI77219.1"
                     /translation="MATTVAFLGLGAIGTPMAARLAQQTQLTVWNRTKSRATEFSERH
                     GARAARTPREAVQGAEAVVTCLPTSREVESLLDGGDGLLAGLAAGTLFLDCTSGDPTT
                     SRRIATRLAERGIAFADAPVSGGTDGAAAGTLTVMVGSDSETFRRALPILRVFGKRIE
                     HMGPVGTGDAMKAVNNALLAVNILALGEGLAALVKAGVPAAVAVDVLNQSSGRSFVSQ
                     TLVPERVLTGKWPRTFRLALLDKDVGISRGLLAETGVPGPILELAGRLLSEARSRLGE
                     DADYLEAIKLTERAAGVEIRG"
     gene            1633..2415
                     /locus_tag="VFD73_24920"
     CDS             1633..2415
                     /locus_tag="VFD73_24920"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI77220.1"
                     /translation="MRLSFSAPRLVLSALGACLVLFVVGPLLRLLIESSPGGLIQSFN
                     DPELQSSIVLTLLTATAATLLAGTLGVPLAYMLARYAFPGRRLVQGLIDLPVVVPHPV
                     AGIALLLFLGRRSVLGGALAHLGLEVVNHVPGIIAAMLFVSAPIVVSGAREAFRSVDP
                     QLERVARTLGDNSWSAVRRVTLPLAARGIVAASILAWARSISEFGSIVILTYNPKVAS
                     IYIFDRFTAFGLSAAIPAAVILLLIALGVFLVVRLLQPGDPA"
     gene            2412..>3168
                     /locus_tag="VFD73_24925"
     CDS             2412..>3168
                     /locus_tag="VFD73_24925"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI77221.1"
                     /translation="MIRLEHLHVRVGAFALSDISLEVPQGGYALIIGPTGSGKTTLLE
                     AIAGHARLGAGRVFMHGDDVTDLPPERRGLGFVYQQYHLFPHLTVRQNISYGMAAARR
                     NGGESATRVEELSDMLAITPLLDRSVRGLSGGEQQRVALARALAPKPSILLLDEPFAA
                     VDPSTRQMLRRELQELHAREGITTLQVTHDFDEALRLGDLVAVLAEGRIAQSGTPEQV
                     FRYPNSAFVARFVGSGNVIAGMVERTNGESEEPF"
BASE COUNT          543 a         1016 c         1018 g          591 t
ORIGIN      
        1 gccgacccgt tctgaagcag cgaggccggc ttgcctacgg cgagctggag cgcttcggct
       61 cgctgctcct gcatcacctg aatgagtcta tcgagtcggg ccacggcggt ctcagtcgag
      121 aggtcggatc aggcggacca gtgatttgtt gatgaactgg acaatgtcgt cggtccagag
      181 ggcgaagaag gcgccagggg cgttgacgta atccagcgcc cgattcctgg agggcggcag
      241 ctcgaagctg gaccggccgc ggtactcgac cccgtcggta agctgaaccg tgagctcgac
      301 gcgtttcgcc gccgaggcgc gggccggatc atccgcgtgg cccagctccc gacaagaaac
      361 caccgccact tgtgccttgg agacgaacgc cacgccccct tccgcaagcg tcaaagcgaa
      421 gaagggatcg tcgcgattga gcatctccag cggactttca ctctcggttg gcgaggtggc
      481 tctggccagg aggtgcagat cgcccgcaag cactaccccc tcggccagca gaactctggc
      541 cgccacccgc tgagtggcgc cccagttgct cattgaattg ttcggcgcat agggccggaa
      601 actgaacaaa gctgcccggt ggcggcaagg gcccgtccgt tagccccgga tctcgacgcc
      661 ggccgcccgc tcggtcagct tgatggcctc gaggtagtcg gcgtcttccc cgagcctgga
      721 tcgggcctcc gataggagtc ggccggccaa ttccagtatc gggccgggca caccagtctc
      781 ggccagaaga ccccgggaga tgccgacgtc cttgtccagg agggccaggc ggaacgtccg
      841 gggccatttg ccagtcaaaa cgcgctctgg gaccaaagtt tggctcacga atgatcggcc
      901 gctggattga ttgaggacgt ccactgcaac cgcggcaggc acaccggcct tcaccaatgc
      961 cgccagccct tcaccaagag cgaggatatt gaccgcgagc agcgcattgt tgactgcctt
     1021 catcgcgtcg ccggtgccca ccgggcccat gtgctcaatc cgctttccga agacgcggag
     1081 aatcggcagc gcccggcgaa acgtttcgga gtcgcttcca accatcaccg tgagagtacc
     1141 cgccgcagcc ccatcggtac cgccgctcac cggcgcgtcg gcaaaggcga tcccgcgctc
     1201 agctaatcga gtcgcgatcc ggcgagaggt tgtggggtca cccgacgtgc agtccagaaa
     1261 cagagtaccg gcagcaagac cggcgagcag gccatctcct ccgtcaagga gagactcgac
     1321 ttcgcgggag gtcggaagac aggtgactac cgcttccgct ccctggaccg cttcccgcgg
     1381 cgttcgggca gcacgagctc cgtggcgctc tgagaattcg gtggctcggc ttttggtacg
     1441 attccatacg gtcagttggg tctgctgggc aagacgagcc gccatcggcg tgccgatcgc
     1501 acccaagccc aggaaagcaa ccgttgtcgc caccgagtca ccaccgattg agggtggctc
     1561 caaggtagcg agcggccgag ctgaagagcc agccctcgac aacgccgcgc tcgggaacaa
     1621 cgatattcca gcatgcgcct ctcgttctcc gcaccccgct tggttctcag cgcgctcggt
     1681 gcctgcctgg tgttgttcgt ggtgggtccg ctcttgcggc tgctcatcga gtcctcgccc
     1741 ggcggactga tccagagctt caacgatccc gagctgcagt cctcgatcgt gctgaccctg
     1801 cttaccgcca ccgcagcgac tctgctggcg ggcacgctgg gtgttccact cgcctacatg
     1861 ctcgctcggt acgcctttcc gggacgcagg ctggtacagg ggctgatcga tctaccagtt
     1921 gtggtcccgc atccggtcgc cggaattgcg ctgctgctgt tcctcggcag gagatcggtg
     1981 ctgggtggcg cgctggcgca cttgggactc gaggtggtca atcatgtgcc ggggatcatc
     2041 gccgcaatgc tctttgtctc ggcgccgatc gtagtgagcg gggcgcgcga ggctttccgc
     2101 agtgtggacc cgcagctcga gcgagtggct cggaccctgg gcgacaacag ctggtccgcc
     2161 gttcggcggg tcaccttacc gcttgccgct cgcggcatcg tggccgcctc cattctggcc
     2221 tgggcccgaa gcatcagtga attcggctcg atcgtgattc tgacctacaa cccgaaagta
     2281 gcgagtatct acatcttcga tcggtttacc gcctttggct tatccgccgc cattccagca
     2341 gcggtcattc tgctgttgat cgcgctgggc gtatttctgg tggtcagact gctgcagccc
     2401 ggggaccctg cgtgatccgc ctggagcacc tgcacgtcag agtcggcgcc ttcgcactca
     2461 gcgatatttc gctggaggtc cctcagggcg gctatgccct gatcatcgga ccgacagggt
     2521 cgggaaagac cactctgctc gaagcgatcg cggggcacgc ccgcctgggt gccggccggg
     2581 tgttcatgca cggtgatgat gtcacggacc tacctcctga gcgacgcggg ctggggttcg
     2641 tatatcagca gtaccatttg tttcctcatt tgacggttcg ccaaaacatc agttacggta
     2701 tggcagcagc tcggcggaac ggcggtgaat cggctactcg ggtggaagag ctgtcggaca
     2761 tgttggctat cacgcccttg ctggatcgtt cggtccgggg actgagcggg ggagaacagc
     2821 aacgggtggc actggcccgg gcgctcgctc ccaaaccgtc cattctgttg ctcgacgagc
     2881 cgtttgccgc ggtggacccg tccacccggc agatgctccg gcgcgagttg caggagctgc
     2941 acgctcgaga agggattacg acgttgcagg tgacccatga cttcgatgag gccctccgcc
     3001 tcggcgacct cgtcgccgta ctcgccgagg gacgcattgc ccagagcggc acgccggagc
     3061 aggtctttcg ctaccccaac tccgccttcg tggcgcgatt cgtgggcagc gggaatgtga
     3121 tcgcggggat ggtagagcgg acgaacggag aaagtgagga acccttcc
//
LOCUS       DASRPQ010002202         1089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_565210, whole genome shotgun sequence.
ACCESSION   DASRPQ010002202 DASRPQ010000000
VERSION     DASRPQ010002202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_565210"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            212..403
                     /locus_tag="VFD73_24930"
     CDS             212..403
                     /locus_tag="VFD73_24930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77222.1"
                     /translation="MAKALFGHVGGPDPRIVSEMRRLQQRVRDLEAELVRLQEENESL
                     MVEAGHEDVLVPDREPAYV"
     gene            702..>1089
                     /locus_tag="VFD73_24935"
     CDS             702..>1089
                     /locus_tag="VFD73_24935"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZI77223.1"
                     /translation="MYLKSLTLRGFKSFASATTLRLEPGITCVVGPNGSGKSNVVDAL
                     SWVMGEQGAKSLRGGKMEDVVFAGTTSRPPLGRAEVTLTIDNTDGALPIDYSEVTLSR
                     LMFRSGQSEYAINGNHCRLLDVQELLS"
BASE COUNT          199 a          347 c          348 g          195 t
ORIGIN      
        1 ggggatccgg ctgacctggg caatccgggc tcggcaggcc gccgaggccg ccaagtttcc
       61 tctcaaaaga cccataacag acgtatcaca gccgtacggc ttgaccagcc aacatctgga
      121 tgagaaacta gttcctgttg attgcgcgcg cggatgagtg cgtgctggtt atgtgcccac
      181 tctggtcact cagcgtggag gacctttaac aatggcgaag gctctattcg gccacgtcgg
      241 cggtcccgat ccccgcatcg tttccgagat gcgccgcctc cagcagcgag tacgcgacct
      301 ggaagctgag cttgtacggc ttcaggaaga gaacgaatcg ctgatggttg aggctggcca
      361 cgaggacgtg ttggtgccgg accgcgagcc cgcgtacgtc taacgagcgc aggcaggacg
      421 cggtaaaaag acagaagacg gatcaggggc gcctttggtg gcgcccctct tcgttgtaca
      481 tctgcccgtt atttatcagt agtcacacgg gcatcatcgt tacggtcgct tggacagcgc
      541 cgtcgccgga gacccggcta ctccggagac tcccggctat tttggcatgc ctgccacccc
      601 accccgtgcc tcctgcatgc ggcacgcgag ccgacctgca attgcctgtc tgcggcgccg
      661 cggagcggta aggtgcgtgg agcgagagga ggggctggca cgtgtacctg aagagcctca
      721 ctctgcgcgg cttcaagtcc ttcgcctctg ccaccaccct ccgcctcgag cccggcatca
      781 cctgcgtggt ggggccgaac ggctcgggca agtccaacgt cgtcgacgcc ctgtcctggg
      841 tgatgggcga gcagggcgcc aagtcactgc gcggcggcaa gatggaggac gtcgtcttcg
      901 cgggcaccac ctcgcggcca ccgctgggcc gggccgaggt gacgctgacc atcgacaaca
      961 ccgatggcgc gctgcccatt gactattccg aggtcacgct cagccggctg atgttcaggt
     1021 cagggcagag cgagtacgcc atcaacggaa accactgccg cctgctcgac gtgcaggaac
     1081 tgctctcgg
//
LOCUS       DASRPQ010002203         1250 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3072002, whole genome shotgun sequence.
ACCESSION   DASRPQ010002203 DASRPQ010000000
VERSION     DASRPQ010002203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3072002"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..606)
                     /locus_tag="VFD73_24940"
     CDS             complement(<1..606)
                     /locus_tag="VFD73_24940"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZI77224.1"
                     /translation="MSTTEPWQLQLYRRSLKKKQTVNALMERLPSPAGRLCLEVGCGT
                     GLTSYFLRQRGGTWVSTDFERDHVRSAKQIVGDRVLQTSDAELPFRSGAFDLVAAINF
                     LEHIEDDQRFFREMVRVLKPGGDFLFMAPKGEAGRPGYALKRVLGFTADQEGFGHARD
                     GYPPAAVRTLFDRNGLELSGMQDYCRLFTESIEDLLNYAYHR"
     gene            complement(643..>1250)
                     /locus_tag="VFD73_24945"
     CDS             complement(643..>1250)
                     /locus_tag="VFD73_24945"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HZI77225.1"
                     /translation="DSPLAPGNIYEETKVSAERLVAEFAEKCGLATVVLRPADVYGPR
                     DQRLLKLFKGVSRGRFPLFGSGDGRRHMVYVDDVVSAFFQACGRDEALGESLIVAGPR
                     VCTLRELLDEITRATGSRRYGFRLPLAPMLMLAAVVEDTCATLKLDPPIYRRRMDFFY
                     SDSEFDTSRARRVLDWEPKVDLREGIQRTLEAYQRDGWLPR"
BASE COUNT          242 a          405 c          384 g          219 t
ORIGIN      
        1 gcggtggtag gcgtagttca ggagatcttc gatcgattcg gtgaacaagc ggcaataatc
       61 ctgcatgccg gagagctcga ggccgttacg atcgaacagt gtgcgcaccg cagcgggcgg
      121 gtagccgtcc cgggcgtggc cgaatccttc ctggtcggcg gtaaatccga gtactcgctt
      181 cagggcatag cccgggcgcc cagcctcacc cttgggtgcc atgaagagaa aatcgccgcc
      241 gggcttgagc acccggacca tctctctgaa gaatcgctgg tcgtcttcga tgtgctccag
      301 aaaattgatc gccgcaacca gatcgaaggc tcccgaacgg aacggcagct cggcgtcact
      361 ggtctgcagg acccgatcac ccacgatctg cttagccgac cggacgtggt cccgctcgaa
      421 gtcggtactc acccaggttc caccgcgctg gcgcaggaag taggaggtga ggccggtgcc
      481 acaacccact tcgagacaca gccggccggc cggggatgga agccgctcca tcaacgcgtt
      541 gactgtctgc ttcttcttga gggagcggcg gtacagctgt aactgccagg gttccgtggt
      601 actcaacgat ctctcccggt gctgttggcg atcaaggttg catcatcggg gcaaccagcc
      661 gtcccgctgg tacgcctcga gcgtgcgttg aattccctcg cgtaggtcta ccttcggctc
      721 ccagtccagg acccgccggg cccgggaggt gtcgaactcc gaatcgctgt agaagaaatc
      781 catgcgacga cgatagatcg gcggatccag cttcagcgtg gcacaggtat cctcgaccac
      841 cgcggccagc atcagcatcg gagccagcgg cagcctgaag ccgtagcggc ggctgccggt
      901 ggctcgagtg atctcatcca gcaattctcg gagcgtgcag acccgggggc ccgccacaat
      961 caggctttct cccaacgctt catcgcgccc gcaagcttga aagaaagcgg agaccacgtc
     1021 gtcgacatag accatgtgac gccgcccgtc gcccgacccg aacagcggaa accgtccccg
     1081 gctgactccc ttgaacagct tcagcagacg ctgatcccgc ggcccatata cgtcggccgg
     1141 acgtaggacg acggtcgcca ggccgcactt ctcggcgaac tccgcgacca gccgctcggc
     1201 ggagaccttg gtttcctcgt agatattgcc gggagcgagc ggcgagtctt
//
LOCUS       DASRPQ010002204         1136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_881578, whole genome shotgun sequence.
ACCESSION   DASRPQ010002204 DASRPQ010000000
VERSION     DASRPQ010002204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1136
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_881578"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..275)
                     /locus_tag="VFD73_24950"
     CDS             complement(<1..275)
                     /locus_tag="VFD73_24950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77226.1"
                     /translation="MNRTLAKNKVRRRRGPLRSWLLAGGLALGTAATVAACGSSSSST
                     AASSPGSSTPSGASSAASATINATSVPGVGTVLVNGQGQTLYMLTSE"
     gene            complement(399..659)
                     /locus_tag="VFD73_24955"
     CDS             complement(399..659)
                     /locus_tag="VFD73_24955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77227.1"
                     /translation="MRTTESSPGNEDGARERDRALERTLRDALALAVSKKVADQALRQ
                     ARNKAHGAGRRDLRRVAGHLAGYGALLTYIWHQRRTQQQSAG"
     gene            complement(801..>1136)
                     /locus_tag="VFD73_24960"
     CDS             complement(801..>1136)
                     /locus_tag="VFD73_24960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77228.1"
                     /translation="SRTVKVNPLLVLLSLLIGTSIGDWIGGFFGSFVAALLAIPVAGA
                     LQVITRELWRATAWPGPPDREPPVEPGPSLPGEQAPETSRELRDGEQEPIKAGLKAPT
                     IDLSGRRCA"
BASE COUNT          182 a          372 c          359 g          223 t
ORIGIN      
        1 ttttccgaag tcagcatgta cagggtctgg ccctgcccgt tgaccaggac ggtgccgact
       61 ccggggacgc ttgtcgcgtt gatcgtggcg gaggccgccg atgaagcgcc tgatggcgtg
      121 ctgctgcctg gggagctggc cgcggtgctc gaggacgacg agccgcacgc cgcgacggtg
      181 gcggccgtgc ccagcgccag gccgcccgcc agcagccagc tcctcagcgg accacggcgg
      241 cgcctaacct tgttcttagc caatgttctg ttcatatcca ccttgcttgc catccttcgc
      301 agcgttcagg cagcggattg cctttgtatt tctctaatcc acccgaccgg agcgtggttt
      361 ccgaggccga tcggcggcgc tggtacaggc cttcgggctt atcccgcaga ctgttgctgg
      421 gttcgccgct ggtgccagat gtaagtcagc agcgcgccgt agccggccag atggccggcg
      481 acacggcgaa gatcacgccg cccagcaccg tgtgccttgt tgcgggcctg ccgaagcgcc
      541 tggtcagcca ccttcttgct gacggccagg gcgagagcgt cccggagggt ccgctccagg
      601 gcgcgatcgc gctcccttgc tccgtcctca ttccctgggc tggattccgt agtcctcatt
      661 acttgcctcc ttgaatgccg agcgacgaat tactgctcac caaccagtcc acccgataac
      721 cgttcggcag aaaaggagtg tgtaactctt ttgtcattgg tccgagctat atcaaatgcc
      781 agatgcgagt accggacctg ctaagcacat cgtctgccag ataaatcgat cgtcggagcc
      841 tttagccccg ctttgatcgg ttcctgctcg ccgtcacgaa gctcccggct ggtctccggt
      901 gcttgctcgc cgggtagcga aggccccggt tcgaccggcg gttcgcggtc gggcggtccc
      961 ggccacgcgg tggcccgcca tagttcccgg gtaatgacct gaagggcgcc cgcgaccggg
     1021 atggcgagca gggcggccac gaaactgccg aagaagccgc cgatccagtc gccgatcgac
     1081 gtcccgatca ggagtgatag cagcacgagc agtggattga ccttgaccgt gcggct
//
LOCUS       DASRPQ010002205         1085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3072319, whole genome shotgun sequence.
ACCESSION   DASRPQ010002205 DASRPQ010000000
VERSION     DASRPQ010002205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3072319"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..767)
                     /locus_tag="VFD73_24965"
     CDS             complement(<1..767)
                     /locus_tag="VFD73_24965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77229.1"
                     /translation="MNSWLVWGGFALAVVFLGWVAYHFTVRTLRFVTLALVVGGVVLV
                     TRYGVTQPSPAAPAAPVDLANAFTGGLNNLSSAFFQPLLPGPDALVPGRVGWLVIVVF
                     LAFAYRELEAWAMRWQPPAVDTSALGGGHPGTQNSGGQAEPGGSGPGGQRDHDELAAE
                     LRFRLSAVEVRAPPLVPGGSTPNGLASIAENSGVQGSGLAGAIIRVAGMLWPSPRRYQ
                     VRVWVKCAGHPAAANSGKGNGQDGPPHTGDGTAGGKE"
BASE COUNT          196 a          376 c          334 g          179 t
ORIGIN      
        1 tattccttgc caccggcggt gccgtcgccc gtatgcggtg ggccgtcctg accattccct
       61 tttcctgagt tcgcggcagc cggatgaccg gcacacttga cccagacccg gacctggtac
      121 cggcggggac tcggccacag catcccggca acgcggatga tcgcgccggc gagcccactg
      181 ccctgcacac cgctgttctc ggcgatggat gcgagcccgt tcggtgtcga accgccaggc
      241 acgagcggcg gcgctcgcac ttccaccgcg gacagccgga acctcagttc ggccgcgagt
      301 tcatcatggt cgcgctgccc gcccggcccg ctgccgcccg gttcggcctg cccgccgctg
      361 ttctgcgtgc ccggatggcc gccgcccaga gcggacgtgt caacggccgg cggctgccag
      421 cgcatcgccc acgcctcgag ttcccggtac gcaaacgcaa ggaacacgac aatgacgagc
      481 catccgacac gcccgggcac gagagcatcg ggaccgggca gcagcggctg gaagaacgca
      541 ctgctgaggt tattcagtcc tcctgtgaac gcgttcgcga gatcgaccgg cgccgctggc
      601 gcggccggag acggctgggt cacgccgtac cgggtgacca gcacaacccc acccaccacc
      661 agcgccaatg tgacgaaccg cagggtacgc acggtgaagt ggtaggcgac ccagccgagg
      721 aaaactacag cgagcgcaaa tccgccccag acgagccacg aattcatgcc gtccctcacc
      781 ccctcgctca ttgtaacgga gtggggagcg gtggtttaga tacacattta gagcagctgc
      841 ttccaactcg gcaagcccgt ggcgcgctgc attgcttcga tttcccagtg cccagccggt
      901 ggcaaaggag ggccattcat gcttcctggt cccacacctc ccttagcctc gatccaccga
      961 tccaatagga gtgtttcggg cgtgtccatg tgaaaggtgc cctctgaact gggacgatgg
     1021 gagtgtctga agcttccgtc gccgagttcg aaagggcacc tgtcaagtgc gattgttgca
     1081 tagcc
//
LOCUS       DASRPQ010002206         1266 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1189938, whole genome shotgun sequence.
ACCESSION   DASRPQ010002206 DASRPQ010000000
VERSION     DASRPQ010002206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1189938"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            101..>1266
                     /locus_tag="VFD73_24970"
     CDS             101..>1266
                     /locus_tag="VFD73_24970"
                     /EC_number="7.5.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HZI77230.1"
                     /translation="MNPTPSPGQEAAMNPTPLPGQEAAVNPTRARGKVLLEMKDIGKT
                     FPGVKALEGVSLTVREGQVHALLGENGAGKSTLIKILSGAYSKDEGQIFFDGKPVDIR
                     QPQDAQTLGIQTIYQEFNLARDLTIGENIYLGHLPMRGLAVDWAQVREGSRKILDTLG
                     VSLSPDTQVSTLSVAEQQLVEIAKSLNRKTRILIMDEPSAVLGEKDLEKLFQVVRSLQ
                     AQGIGIIYISHRLREIFELADEVTVLKDGRYVGTRQVADVTMDDLVKLMIGRDLKDVY
                     PKRTPTLGETLLEVKNLARTKLVHDVSFDLHAGEIVGFAGITGSGRTELVRAIFGADP
                     CTGEMRLRGKPYKPNSPEAAIRQGVALVTEDRKAQGLFLKQNVTVNTTISGLKLL"
BASE COUNT          259 a          379 c          405 g          223 t
ORIGIN      
        1 agtcgaccta ccaggtgctg gtcacgggag tcctggtgat cgtggccgtg tccattgact
       61 atctctcgca ccggggcaag tagctgcaaa ggaggccgcc atgaatccaa ctccatcgcc
      121 gggccaggag gctgccatga atccaacgcc attgccgggc caggaggctg ccgtgaatcc
      181 aacgcgggca cggggcaaag ttctgctgga aatgaaggac attggcaaga ccttccccgg
      241 cgttaaggcg ctggaaggcg tcagtcttac cgtgcgggaa ggccaggtcc atgccctgct
      301 cggggagaat ggggcgggga agtccacgct gatcaagatc ctgtcgggcg cctacagcaa
      361 ggacgaaggc cagattttct tcgacggcaa gcccgtcgac atccgccagc cacaggacgc
      421 ccagacgctg ggcatccaga ccatctacca ggagttcaat ctggcccgcg acctgaccat
      481 cggggagaat atctacctgg ggcacttgcc gatgcgcggc ctcgcggtgg actgggcgca
      541 agtccgggaa ggatcgcgga agatcctgga caccctgggc gtttcgttgt cccccgacac
      601 ccaggtttcg actctctccg tagcagagca gcaactggtg gagatcgcca aatcgctgaa
      661 tcgcaaaacg cgtatcctga tcatggacga gccctccgcc gtgctgggcg aaaaggacct
      721 ggagaagttg ttccaggtgg tgcgttcact ccaggcgcag ggcatcggca tcatctacat
      781 ttcgcaccgg ctgcgggaaa tctttgagct ggccgatgag gtcaccgtgc tcaaagacgg
      841 gcgctacgtc ggtacccggc aggtcgccga tgtgacgatg gatgatctgg tcaagctgat
      901 gatcgggcgc gacctgaagg acgtctatcc caagcgcacg cccacgctgg gcgagacctt
      961 gttggaagtc aagaacctcg cccgaaccaa gctcgtacac gatgtgtcct tcgatctcca
     1021 tgcgggggag atcgtcgggt ttgccggcat taccgggtcg gggcgcacgg agctggtccg
     1081 cgccatcttt ggagccgacc cgtgtacggg ggaaatgcgc ctccgcggca agccgtacaa
     1141 gccaaattcc ccggaggccg ccatccgcca gggcgtggcc ctggtgaccg aggatcgcaa
     1201 ggcgcagggg ctgtttctca agcagaacgt gacggtcaat accaccatct caggtctgaa
     1261 gctgct
//
LOCUS       DASRPQ010002207         1725 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3072829, whole genome shotgun sequence.
ACCESSION   DASRPQ010002207 DASRPQ010000000
VERSION     DASRPQ010002207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3072829"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1007)
                     /locus_tag="VFD73_24975"
     CDS             complement(<1..1007)
                     /locus_tag="VFD73_24975"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HZI77231.1"
                     /translation="MPDPLSINVQHLKASETVAISNEAKRRKAAGENVLDLGVGEPDF
                     DTPAPVAQAGIQAIQRGMTRYPPNIGIPELRRGIAQQLSTLSGGRPVDPDHIVVSSGS
                     KQSIFNACFTLFGPKDRVLIPSPAWVSYPQIVHLTRAEPVLVPGEPEWGLKVSVKDLD
                     RMSHKWTRGLILCSPCNPTGSVYTHAELKAIAEWAHKNDIWIIADEIYRRINYGPGPA
                     PSLLDLPDELLERTVIIYGASKAYAMTGWRIGAALAPPHVAKAMAALQSHTTTGANHP
                     AQWAAAAAFTDERVDAEVNRMVAAFRRRRDYIVDRFRNDAPGIEFVEPHGAFYFFFRV
                     DG"
     gene            1139..>1725
                     /locus_tag="VFD73_24980"
     CDS             1139..>1725
                     /locus_tag="VFD73_24980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77232.1"
                     /translation="MTTFEDFHLLASVGTALDHLGWGPDDAAMRDAAPTAARGHNLVA
                     VTPPGPVYATPAVAGALSRVGAGKLMLLLCPPAQLDEWGQLVHGLVVGSTIRSHVAAG
                     TARAMRLIRAGEVDVLISSLSIASTLVVRSALSMDTVGSLLVAWPESWTDEEGLIPLM
                     QDLPKEAQRIIYTANGNRVNALTERYARKALTVHMA"
BASE COUNT          306 a          546 c          555 g          318 t
ORIGIN      
        1 ccatctaccc ggaaaaagaa gtagaaggcg ccgtgcggct cgacaaattc gatcccgggt
       61 gcatcgttgc ggaatcggtc gacaatgtag tcgcgccggc gccggaaggc ggcaaccatt
      121 cggttgacct cggcgtccac ccgctcgtca gtaaatgcgg ccgcggcagc ccactgggcc
      181 gggtgattgg ctccggtcgt ggtatgcgac tgcagggccg ccatggcctt ggcgacgtgc
      241 ggcggagcca gcgccgcgcc gatccgccaa ccggtcatgg cataggcctt actggcacca
      301 tagatgatca ccgtccgctc cagcagctca tctggcagat cgagcaaaga tggcgccggt
      361 cccggcccgt agttgatccg gcggtagatc tcgtccgcaa tgatccagat gtcgttcttg
      421 tgcgcccact cggcgatggc cttgagctcg gcgtgcgtat agaccgatcc agtcgggttg
      481 cagggagagc acaggatcag tccccgagtc cacttgtgac tcatccggtc gagatctttc
      541 acgctgacct tgagtcccca ctccggctcg cccggcacca acactggctc ggcccgggtc
      601 aggtgcacga tctgggggta cgacacccag gcaggcgacg ggatcagaac ccgatccttc
      661 gggccgaaca gggtgaaaca cgcgttgaag atcgactgct tcgatcccga gctcaccacg
      721 atgtgatccg ggtccaccgg gcgcccgcct gacagcgtcg agagctgctg agcgataccg
      781 cggcgcagtt cggggatgcc gatattcggc ggatagcgag tcatcccacg ttgaatggcc
      841 tggattcctg cctgggccac cggagccggc gtgtcgaagt ccggctctcc caccccgagg
      901 tcgagcacgt tctcccccgc agccttccgg cgtttcgctt cattacttat ggccacggtc
      961 tccgaggcct tgaggtgctg aacattgatg gacaagggat cgggcatgcg gacgtccgga
     1021 atggggtggt ggcctgcggg aagacggggg aaaagttcgt tcacagcctg gcgatgtcaa
     1081 ctgtgacagg cttagcttgg tcgagtcgat caggtccgca ctatcgagtg gagacgccgt
     1141 gaccacattc gaagactttc atctcctcgc ctccgtgggc acggcgctcg accatttggg
     1201 ttggggccct gacgatgctg cgatgcggga cgccgctcct accgcagctc gcgggcacaa
     1261 cctcgtcgcg gtcacccctc cggggccggt ctatgcgact ccggcggtgg caggcgctct
     1321 gagccgcgta ggcgccggca aactgatgct cctgctctgt ccgccggcgc aactcgacga
     1381 atgggggcag ctggtccacg gcttggttgt ggggagcacc attcgcagcc atgtggcggc
     1441 ggggactgct cgtgccatgc ggctcatccg ggccggtgag gtcgatgtct tgatcagcag
     1501 cctgagcatc gcctctaccc tcgttgtccg gtccgcactc agcatggata ccgtaggctc
     1561 cctgctggta gcgtggccgg agagctggac cgatgaagag ggactcatcc ccctcatgca
     1621 agacttgccc aaggaagcgc aacgcatcat ctacaccgcc aacggcaatc gggtaaacgc
     1681 cttgaccgag cggtacgcca gaaaggcgct cactgtgcat atggc
//
LOCUS       DASRPQ010002208         1183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4323074, whole genome shotgun sequence.
ACCESSION   DASRPQ010002208 DASRPQ010000000
VERSION     DASRPQ010002208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4323074"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            560..>1183
                     /locus_tag="VFD73_24985"
     CDS             560..>1183
                     /locus_tag="VFD73_24985"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HZI77233.1"
                     /translation="MVGGTALAEVVDLPRYTDYLHRLMALSRAGMACFDSDSCFGLGM
                     CLVKYGEASVLASQAGDGTGRVKGERPFPDQPEGANCLPQIDHILVLMMENHSYDNYL
                     GMLGRRHGEQPRGDGFTLGSDGMPTAANPTPDGKVQHAFRMPTTCQLSGKPSQEWKQA
                     HIQFNGGKNDGFVKSDSGPVAMGYWNGKDLPWAHSLAATFPLGDRWFA"
BASE COUNT          216 a          378 c          390 g          199 t
ORIGIN      
        1 gatcccgggt cggagaacgg cactctggtc aacggcaggg agataaccgc cggggtccgg
       61 ttgctcctcc acgacggtga ccggatccac ctcggggcct ggacgttgat cacgatccag
      121 gccgggtgac atgtttgccg ggcggcgttc ccgtctggtc atccgggctg acggcggcag
      181 aaatgtagct ccgccaagta cgcagagttc gcgcccgcca actgttccgg ggcgccgcct
      241 cttgcgccgg cgcataattc gtagtctcat tatgactatc ggaaggagcg cggccaacgg
      301 gccgcggcca gtacggtgac cgctggcggg ccgctgcggg ccagccacac cggcataccg
      361 ggggccataa gggctcgtca ccgggacccg tctccccccc acgggtcccg gtgacttctt
      421 cctgcgtgtg gttgcgatta caagcccagg gccagggccg gagggaccga cctgctgacg
      481 gtcttgcttc cgggtcaata cgccgaaacc gagggcgccg ggcaacgcaa gtgaaccgct
      541 gcctacggct ggtacggcaa tggtgggcgg aacggcgctg gccgaggttg tggatttacc
      601 ccgatacacc gactacctgc accggctcat ggcactatcc cgagcaggca tggcctgctt
      661 tgatagtgac agctgctttg ggctggggat gtgcctggtc aagtacgggg aggcgagcgt
      721 tttggcttca caagcgggtg atggtacggg acgggtcaag ggcgagcgcc ccttcccgga
      781 ccagccggaa ggcgcgaact gccttcccca gatcgaccac atcctggttc tgatgatgga
      841 gaaccactcc tacgacaatt atctgggcat gctgggccga cgccacggtg aacagccgcg
      901 gggagatggg ttcacgctcg gatccgacgg catgcccacg gccgcaaatc ccaccccgga
      961 cggtaaagtc cagcatgctt tccgcatgcc gaccacctgc cagctatcgg gcaaaccgtc
     1021 ccaggagtgg aagcaagccc atatccagtt caacggtggc aagaacgacg gattcgtaaa
     1081 atcagacagc ggcccggtcg ccatgggcta ttggaacggc aaggacctgc cgtgggccca
     1141 ctcgctggcc gccacgttcc cgctgggcga ccgctggttc gcc
//
LOCUS       DASRPQ010002209         1397 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2442863, whole genome shotgun sequence.
ACCESSION   DASRPQ010002209 DASRPQ010000000
VERSION     DASRPQ010002209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1397
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2442863"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1196)
                     /locus_tag="VFD73_24990"
     CDS             complement(<1..1196)
                     /locus_tag="VFD73_24990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77234.1"
                     /translation="MTNLISPFTMLVSKGRAARSLAIRAQTRAEEWMWAGSERGWSWL
                     RIRRRALDVVTFLAFLGVPAALWLPWWLTARTEQKDWYVKEGALSTLLQVVPATVVAV
                     FIFAVGAVFVMVQIVGPTLGSRAIEGLIVRRRARTCVIAGTILLLACLTLAALARIIE
                     KKPPDPWEASSAPVLALATLFYVPYSVWCVSTILHGYVSPGAYSALLSKWRGGGGPLA
                     SEWSFRQLRALRQWLRTACSTGESRDVVFALKGFQDLLGHYCAKAGSEENASRYTKFR
                     NQPPPEYSDTEEIVNSKWRGLLDPKSAPPQKGWFGDEFGRALARCAEVGIRSEVLLLR
                     DFDRLVVVLGAATLQLAGLESLEEECIDPKVQSLPEEAGFLLDRIAEIGMYAFQVRDE
                     AYTDWFV"
BASE COUNT          270 a          454 c          443 g          230 t
ORIGIN      
        1 acgaaccagt cggtgtacgc ctcgtcgcgg acctggaagg catacattcc gatctcggcg
       61 atcctgtcca gcagaaaacc ggcctcctcg ggcaatgact gaaccttggg gtctatgcac
      121 tcctcttcca gcgactccaa gccggcaagc tgcagtgtcg ctgcgcccag gaccacgaca
      181 aggcggtcga aatcacgcag gagcagtacc tccgaccgga tgccaacttc tgcgcagcga
      241 gccagtgccc ggccgaactc atcaccgaac caacccttct gcggcggggc gctcttcggg
      301 tcgaggagtc cccgccattt gctgttgaca atctcctcgg tatcggaata ttcgggcggc
      361 ggctggttgc ggaacttggt gtagcgagac gcattttcct cgctccccgc tttggcgcag
      421 tagtggccca gcaggtcctg gaagcctttc agggcgaaga cgacgtcacg gctctcgcct
      481 gtgctgcagg cggtgcggag ccactgccgc agtgctcgga gctggcggaa ggaccactca
      541 gaggccaggg gccctccccc tcctcgccac ttgctgagca gtgcgctata agcgccgggt
      601 gacacgtagc cgtgaagaat ggtgctgacg caccagaccg aatacggcac gtagaaaaga
      661 gtcgccagcg ccaggaccgg ggccgacgaa gcctcccatg ggtctggggg cttcttttcg
      721 atgatccggg ccagtgcagc aagggtcagg caagcgagca gcaggatcgt cccggcgatc
      781 acgcacgtgc gggcgcgtcg ccggacgatt aggccctcga tcgcccggga gccgagcgtg
      841 gggccgacga tctgcaccat gacgaaaacc gctccgacag cgaagatgaa gacggcgaca
      901 accgtcgcgg gcaccacctg gagcagcgtg ctcaaggccc cttccttgac gtaccagtct
      961 ttctgctcgg tccgtgcggt aagccaccag ggcagccata gcgccgccgg tacgcccagg
     1021 aaggcgagga acgtcactac gtccagcgcc cgccggcgga tcctaagcca tgaccagccg
     1081 cgttcggacc cggcccacat ccactcctcg gccctcgtct gggcgcgaat ggccaggcta
     1141 cgcgcggccc tgcccttact gaccagcatg gtgaacggcg atatgaggtt ggtcatgtcc
     1201 actcctcggc acagtgagcg cttgctcagg cctgcggaat cacgacgtct ggggaaagtg
     1261 agcctcattg caatggccac gaggccggta cggcggaagc gagtcacatg atcgattaac
     1321 gatgcctctt atcccggcgg cgccctggac ccggggcgga tatgggaaca gccacctggc
     1381 atgggctgga atagatg
//
LOCUS       DASRPQ010002210         1069 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_882536, whole genome shotgun sequence.
ACCESSION   DASRPQ010002210 DASRPQ010000000
VERSION     DASRPQ010002210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_882536"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            97..768
                     /locus_tag="VFD73_24995"
     CDS             97..768
                     /locus_tag="VFD73_24995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77235.1"
                     /translation="MVLNALRRIAATEDFGMHATQMEKSLGDFEKSRPFIVTTVLETS
                     LLLEPDGRLVEILVDSLLAARRPYGDLLLWPEKAEPLLIDPNPSVAHTARAVRVLAGV
                     EAIRPSSQVQEALEQATAWLMEQRDLHNAYEVTERGLETVLIRHLTSAWVVKALVSAD
                     VPTAHPAVSGALAQIWNSYGGDTAALWAWDNGDLPIWMTFDAIEALRLANLAAPVRPG
                     WFPPA"
BASE COUNT          182 a          345 c          359 g          183 t
ORIGIN      
        1 ctggtcccgg tcgcggaaaa cctgcggaca atggccttcc ccaaaggtgg gtacgcgagc
       61 cgcgggcaat ccggaccgcg gtcggaggcg actgcgatgg tgctgaacgc gctgcgccgg
      121 atcgctgcca ccgaggactt cgggatgcat gccacccaga tggagaagag cctcggtgat
      181 ttcgagaagt cgcggccatt catcgtgacg acggtcctgg agacgagcct gctgctcgag
      241 ccggacggaa ggctcgtgga gatcctggtc gacagcctgc tggccgcccg tcggccctac
      301 ggcgacttgc tgctgtggcc ggaaaaagct gagcctttgc tgatcgatcc gaacccgtcc
      361 gtagctcata cggcgcgtgc cgtgcgggtg ctggccggcg tggaggcgat acggccgtcc
      421 agccaggtcc aggaggcgct ggaacaggcc acggcctggc tgatggagca gcgtgacttg
      481 cacaacgcgt acgaagtcac cgaacgcggg ctggagacgg tgctcatcag gcacctcacg
      541 tccgcctggg tggtgaaggc cctggtctcg gccgacgtgc cgacggccca tcccgcggtg
      601 agcggcgcgc tggcccagat ctggaacagc tatggcggag acaccgctgc cctgtgggca
      661 tgggacaacg gcgacctgcc tatctggatg accttcgacg ccatcgaggc actgcggctc
      721 gccaatctgg ccgccccggt ccgtcccggc tggttcccgc ccgcgtgacg gcggcgctgt
      781 acggcaaaac ctgcctcatt cagcagcgat gtcggaattg tcaatgcggc acgctcattt
      841 gtctcgggcg agcggggaat ccgtgatcat ccggtgaccg gaagaagcca tccggctcgg
      901 caaggctggt gtagtctctg ctcgcgccca atgtgccacg ttcctcgtgg acgcctccat
      961 gagccaccag acccctcagg gaatgggctt tatcagctcg gtattccgga tggcataccc
     1021 caagaattcg gtccggtact accgggtccc cgccagagtc gccgtcgtc
//
LOCUS       DASRPQ010002211         2302 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1190698, whole genome shotgun sequence.
ACCESSION   DASRPQ010002211 DASRPQ010000000
VERSION     DASRPQ010002211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2302
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1190698"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..724)
                     /locus_tag="VFD73_25000"
     CDS             complement(<1..724)
                     /locus_tag="VFD73_25000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77236.1"
                     /translation="MIGMIRRALATLRSPLRVGVVAILVLAFALLFLNLSLARQQSPS
                     SQAADVATPTAPVATVTTTFLPAATATIPLTGSTPTPEIRDRGPPQTKTTGTAPLRVI
                     AVAAEFRSDYTVPRAPELCYDNTMNTNAPLIAVANPIQGSVSLHFAPASAEGDVVFRW
                     RLSTGWTTPPETLTWRSPTFNTSIPAAAQATSIVFQAAEADGTQMWAQVEILSPTPML
                     SDRVYFYAPNCAFRFLGFGSQLT"
     gene            1158..1799
                     /locus_tag="VFD73_25005"
     CDS             1158..1799
                     /locus_tag="VFD73_25005"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI77237.1"
                     /translation="MAGDPPPGLDTEKKSLAASERNEEARSAWREAIAQRDPGQFVFV
                     DESGTNIALTRLYGWAPHDQRASGSVPRNHGTNTTVVAALAPDGVHVPWMIEGAMDTA
                     TFEWYITEQLAPTLRPGQVVVLDNLSVHKAASIRQAIEARHCQLLFLPPYSPDFTPIE
                     QAFSKVKAILRGLGARTREALWEAVHVAVDAITPEDAIAWFAHVGYTLPAQAT"
     gene            complement(1994..>2302)
                     /locus_tag="VFD73_25010"
     CDS             complement(1994..>2302)
                     /locus_tag="VFD73_25010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77238.1"
                     /translation="APYYASLILRHAMSYLLELAERGIILRTLSTVATTEDGERLARK
                     LGFTEIIHGKGPLGDERRAFQLDLDERKPTAQLAIRYQAALRNRTRRAKRHQAERRSA
                     "
BASE COUNT          419 a          684 c          795 g          404 t
ORIGIN      
        1 ccgtcagctg cgacccgaag cccaggaaac ggaatgcgca gttgggcgca tagaagtaca
       61 cgcggtccga gagcatggga gtaggcgaga ggatctccac ttgcgcccac atctgggtgc
      121 cgtcggcctc ggcggcctgg aagacgatcg acgtcgcctg ggcggcggcc gggatgctcg
      181 tattgaaggt gggggagcgc caggtgagtg tctcgggcgg ggtcgtccag ccggtactca
      241 ggcgccatcg gaagaccaca tcgccctcag cactggcggg cgcgaagtgc aggctcaccg
      301 acccctggat ggggttggcg accgcgatga gcggcgcgtt ggtattcatg gtgttgtcat
      361 agcagagctc cggggcgcgg ggaacggtat aatcgctgcg gaactcggca gcgaccgcga
      421 tgacgcgcag gggtgccgtg cccgtggtct tggtctgtgg cgggccgcga tcacgaatct
      481 ctggtgtggg ggtggacccg gtgagtggga tggtggcggt tgccgcgggc aggaacgtcg
      541 tcgtcaccgt cgccacgggc gcggtgggcg tcgccacatc cgccgcctga gacgagggtg
      601 actgctgccg ggcgaggctg aggttcaaga aaagcaaggc gaaggcgagg accaggatag
      661 ctaccacgcc gacgcggagc ggactcctga gcgtcgccag cgctcgccga atcataccga
      721 tcaccacaat ctcccgttct aggtttctgg acagcaactc gctcccgtga cgtaccgccc
      781 ggtcatgccg ctaggcctcc ctagagcaac ttgcgagaag caggggcagg catgggttat
      841 gcagagactc catgtatgcg agcgtattcg accgacctga aagaacgctt ggtgcgagcg
      901 gtggctgagg gtcagcccat gcgagtagcc gctcgccgct ttggggtggc agtgaccacc
      961 gtcaaacggg cggtggtgca agcgcgcgag acgggctcgc tggagcgcca gcccattccc
     1021 ggcggcccgc gccgcattgg acccgagcag gaagccgtgt tgcgggcccg actggaggcg
     1081 gcccccgacg ccaccgtctt ggagcattgc gcctggtggg cggagcacga gggccaacag
     1141 ctgagtgaag cgacgatgtg gcgggcgatc cgccgcctgg gctggacaca gaaaaaaagt
     1201 cactggcagc cagtgagcgc aacgaggagg cgcgcagcgc ctggcgcgag gcgattgccc
     1261 agcgcgaccc cgggcagttc gtctttgtcg acgaaagcgg cacgaacatc gccttgacgc
     1321 ggctctatgg ctgggcacca catgaccagc gggccagcgg atcggtgccg cgcaaccacg
     1381 gcacgaacac cacggtggtg gccgcgctcg cgcccgacgg cgtgcacgtg ccctggatga
     1441 tcgagggcgc catggatacg gccaccttcg agtggtacat caccgagcag ttggcgccga
     1501 cgctgcgacc agggcaggtg gtggtgctgg ataatctgag cgtccacaag gcggccagca
     1561 ttcgccaggc gattgaagcg cgccactgcc agctgctctt cctgccccct tactcgcccg
     1621 acttcacgcc gatcgagcaa gcgttctcga aggtcaaagc catcttgcgc gggctcggcg
     1681 cccgcacccg cgaggccctc tgggaggcag tgcatgtggc cgtagacgcg atcactcctg
     1741 aggacgctat cgcgtggttt gcccatgttg gctacactct gcctgctcaa gctacctgaa
     1801 aggtgctcta gtaccaacct gctagacgta caaagggtac gtcaagtgca taatcaccta
     1861 tcttttaact tgctagtggg gcttccgaag tagtcaatgg tgtcggtgag gtcttggcca
     1921 atatagatat tgccatttgg ataggtgatc ttgtagatga ccttcactat caaatctctc
     1981 ccgcatgcat tggctaggcc gatcgcctct cggcctgatg gcgcttcgcg cgtcgggtac
     2041 ggttcctgag cgcggcctga tagcggatgg cgagttgcgc tgtgggcttc cgttcatcca
     2101 ggtccagttg gaacgcgcgc cgctcgtcgc ccaacggtcc cttgccgtgt atgatctctg
     2161 taaagccgag cttgcgggcc agacgctcgc cgtcctcagt ggtggcgaca gtggaaagtg
     2221 tgcgcaggat gatgccacgc tcagcgagct cgagtagata gctcatcgcg tgccgcaaga
     2281 tgagggatgc gtaatagggt gc
//
LOCUS       DASRPQ010002212         1022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2163302, whole genome shotgun sequence.
ACCESSION   DASRPQ010002212 DASRPQ010000000
VERSION     DASRPQ010002212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2163302"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..812
                     /locus_tag="VFD73_25015"
     CDS             <1..812
                     /locus_tag="VFD73_25015"
                     /inference="COORDINATES: protein motif:HMM:NF012632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77239.1"
                     /translation="QLFGAEEMLHAAAGGDRLCALTADKAVLCYGVVRYNGVTRHYYD
                     QQGHPAAGEWLLDSTMQVDSWPADLSVGSHHDCYIATGGDAFCIGSNTYGALGGGADV
                     VVEDDLFLWGSARVAGGHGFRAITAGEDHTCGLAGTIAYCWGFNGQGGLGLGDFTEPD
                     VPNPVAGNLQFAQIDAGAWYTCGVTVDNIAYCWGDNRAGQLGNGTRTLSFSPVRVAGD
                     IRFRSVDAGRDHTCGMSIDSIVYCWGSNSYGQLGDGSTSDALVPVKVARQP"
     gene            809..>1022
                     /locus_tag="VFD73_25020"
     CDS             809..>1022
                     /locus_tag="VFD73_25020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77240.1"
                     /translation="MSSRAAVALAILATLLVSCTGTDSDLTAPTLHETPGPLLVSDLL
                     PGTQGGPGPTSPHAFASLPAGSIPGGT"
BASE COUNT          178 a          337 c          326 g          181 t
ORIGIN      
        1 accagctgtt cggagccgag gagatgcttc acgccgctgc cggtggagac aggctctgcg
       61 cgctcacggc cgataaggct gtgctctgtt acggcgtcgt cagatataac ggagtaacgc
      121 gccattacta cgaccagcag ggacacccag ccgccggtga atggctgctg gactcgacaa
      181 tgcaggtgga ttcgtggccg gcggacctca gcgtgggctc ccaccacgac tgctatatag
      241 caactggggg cgatgctttc tgtatcgggt cgaataccta cggcgccctg ggcggtggcg
      301 cggatgtggt tgtcgaggat gacctcttct tgtggggctc ggcaagagtc gctgggggcc
      361 acggttttcg agccattaca gccggcgagg accacacgtg cggcctggct ggcactatcg
      421 cctattgctg gggattcaac ggccaggggg gcctcggact cggcgacttc accgagcccg
      481 acgtccccaa ccccgttgca ggcaacctgc aattcgctca gatcgacgcg ggcgcgtggt
      541 atacctgcgg cgtgaccgta gacaacatcg cctattgctg gggcgacaac cgcgcaggcc
      601 agctcggaaa cggaaccaga accctgagct tcagcccggt ccgggttgcc ggtgatattc
      661 gcttccgatc tgtggacgcg gggcgggacc acacctgcgg tatgtccatc gacagcatcg
      721 tctactgctg gggctccaac agctatggcc aactcggcga tggcagcact agtgacgccc
      781 ttgtccccgt gaaggtggcg cgccagccat gagttcccga gcggcagtcg cgctggcaat
      841 cctggccacg ctgctggtca gctgcaccgg caccgactcc gacctcacgg cgccgacgct
      901 tcacgaaact ccaggcccgc tcctggtttc cgacctcctg cccgggaccc aaggaggccc
      961 cgggccaacc agtccccatg cattcgcatc cctcccagcg ggctcgatcc cgggtggcac
     1021 gg
//
LOCUS       DASRPQ010002213         1143 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_264336, whole genome shotgun sequence.
ACCESSION   DASRPQ010002213 DASRPQ010000000
VERSION     DASRPQ010002213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264336"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            79..564
                     /locus_tag="VFD73_25025"
     CDS             79..564
                     /locus_tag="VFD73_25025"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HZI77241.1"
                     /translation="MSRARVRSWSELRQEMVTSPARAFGTIYRRFQDAANQAYAARGW
                     KGLTLSYVQFLSETEETGTRLSDIASALKTTKQYAGRLAKEMASKRLVTLVTDPLDQR
                     AVLAKPTERGWAFLEDACEVRAELESRYLGLLSKRRAAEFVATLRELVAASEADGWTM
                     R"
     gene            complement(561..911)
                     /locus_tag="VFD73_25030"
     CDS             complement(561..911)
                     /locus_tag="VFD73_25030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77242.1"
                     /translation="MRRLASWSLDRVVGAWLAWFGLIVAALAFDVMRHWQTSAPAQRP
                     ESAAEPGKLDMIGAANTARQPTVPEQHTDFVYSVVVDRMMLMKLAILVIGPPTLLTGA
                     GLYSRRSTHPAQRI"
     gene            complement(953..>1143)
                     /locus_tag="VFD73_25035"
     CDS             complement(953..>1143)
                     /locus_tag="VFD73_25035"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HZI77243.1"
                     /translation="AAGSSLDKIVSATVVLADEDDFAGMNEEWVRWFPSNPPARQGAK
                     LPVRVPGLKVSIAVIAEA"
BASE COUNT          221 a          350 c          360 g          212 t
ORIGIN      
        1 atcttcatgg acagaggttc ccctggttgg tagactttag taaccttacc ttatcattta
       61 ttaacctagg gttactttat gtcaagagcg cgcgtccgct cctggtcgga gctgcggcag
      121 gagatggtca cttcaccggc ccgcgccttc gggacgatct atcgccggtt tcaggacgct
      181 gccaaccagg cgtatgccgc ccgaggatgg aaaggcctga cactgtcata cgtccagttc
      241 ctctcggaga cggaggagac cggcacgaga ttgtcggata tcgcctcggc cctgaagacc
      301 accaagcagt atgcggggcg actggcgaag gagatggcgt cgaagcggct ggtcacgttg
      361 gtgaccgatc cgctggacca acgcgcggtc ctggccaagc ctaccgagcg aggatgggcg
      421 ttcctggagg acgcatgtga ggtgcgggcg gaattggagt cccgctacct gggcctgctc
      481 tccaagcgac gtgcggccga attcgtcgcc acgctcaggg agctcgttgc ggcgagtgaa
      541 gctgacggat ggacgatgcg ttagatccgc tgtgcggggt gcgtagagcg gcgggagtag
      601 agcccggctc cggtcagcaa cgtgggcgga ccgatcacta ggatcgcgag tttcatgagc
      661 atcatacggt caacgacgac gctgtacaca aaatcagtat gctgctcggg tacagttggc
      721 tgcctggctg tgttcgctgc cccgatcatg tcgagtttgc cgggctccgc agctgactct
      781 ggtctctgcg ctggagccga tgtttgccag tgtcgcatca catcgaaggc cagcgcggca
      841 acgatcagcc cgaaccaggc cagccacgcg cccaccactc ggtcaagaga ccaggaggcc
      901 agtcggcgca atctcagtcc cgcgttaccg agcccgcaaa agatcccccc acctaagcct
      961 cggcaatcac cgcaatggag accttgagac cggggactcg caccggcagt ttggcccctt
     1021 ggcgagccgg agggttggag ggaaaccagc ggacccactc ctcgttcatg cccgcaaagt
     1081 cgtcctcgtc cgcgagaacc accgtcgcac tcacgatctt gtccagcgag ctgccggccg
     1141 cct
//
LOCUS       DASRPQ010002214         1051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2443322, whole genome shotgun sequence.
ACCESSION   DASRPQ010002214 DASRPQ010000000
VERSION     DASRPQ010002214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2443322"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(649..>1051)
                     /locus_tag="VFD73_25040"
     CDS             complement(649..>1051)
                     /locus_tag="VFD73_25040"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI77244.1"
                     /translation="GHAVTMCASSRNSAFYQDFLQLEEHANPEGIIYVITDNLSSHDS
                     KSTRAWLEDHPRIRHAFIPRGACWLNFQEGWWRIFRRQALAGQSFADPDEIAHATRVA
                     TAQLNARARPWIWGRPEPKPRSYRRRFIYTL"
BASE COUNT          187 a          315 c          363 g          186 t
ORIGIN      
        1 atcgggcttg acggcagccc ttggcaagga ttcagtgggc atctatcaga aggatggcca
       61 gaaccgagcg ccgccagcgt ctgtagccac cgcgtgtagc agccatcccg gtcaatcccg
      121 atcgacagcg ggtcaacgga aagataaatc ccacctcacg cactatcccg acgcattggc
      181 ctgatcttct gagcagcggg tcctgctgga gaaactatcg ccgccgcctg cggcggacac
      241 aggagaacat tgacggacga tgccgcccag gtcaggcatg ccgataccat ggcagtccgc
      301 atcgttgctt ggcttcagac gaagaggcgg ccggttcaaa tcccggccaa cccaaccaca
      361 aaacggcagg tcacgaggcg tctggtaatc cgcggttagc gttccctctg tcccgatgtc
      421 tgattttggg agccagatgg gagcgaacgg gctggccggc gggccggata ctggccagca
      481 gccggttaag cagctgcacc gcggacactg gcgagagtgc agcgcgctga cgtagcgatt
      541 ccttccagcg ggcttgcagc gcggccttca gttcttcccg catggccggg ctgacgtgac
      601 cgtacacgcc gcgcatgccg ggttcgtcgt ggcctagttc tacgttcctt aaagggtgta
      661 tataaagcgc cgacggtagg agcggggttt gggttcgggc cgtccccaga tccagggccg
      721 ggcgcgggcg ttgagctggg cggtggccac ccgggtggcg tgggcgatct cgtcggggtc
      781 ggcgaaggac tgcccggcca gcgcctgccg ccggaagatc cgccaccagc cctcctggaa
      841 gttcagccag caggcgcccc tggggatgaa ggcgtgccgg atgcggggat gatcctccag
      901 ccaggcccgg gtgctcttgc tgtcatggct ggagaggtta tcggtgatca cgtagatgat
      961 gccctcgggg ttggcgtgct cttccagctg gaggaagtcc tggtagaagg cgctgttgcg
     1021 ggacgaggcg cacatggtga ccgcgtggcc g
//
LOCUS       DASRPQ010002215         1250 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_264468, whole genome shotgun sequence.
ACCESSION   DASRPQ010002215 DASRPQ010000000
VERSION     DASRPQ010002215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264468"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..710
                     /locus_tag="VFD73_25045"
     CDS             <1..710
                     /locus_tag="VFD73_25045"
                     /inference="COORDINATES: protein motif:HMM:NF017181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HZI77245.1"
                     /translation="GTVPAVFIPRDSTDAGHPMHSPPKLRADVGSSSREASAALGITV
                     GNTLTMPKQFVRLAGSRATGRSFDDRVGSAAQILAVRRLDPAHLRHRVIFIWSVREEV
                     GLEGAQAAAHALGLRTARVHAIDTFVSADSPLEISTFAVAPLGQGAVARALDNSSVTP
                     PAYVDSLIQLARRHGIPLQVGTTNGGNDGSVFGDYGVPDVPIGWPLRYAHSPAETIDL
                     RDVESLAELIRAVAEDW"
     gene            781..>1250
                     /locus_tag="VFD73_25050"
     CDS             781..>1250
                     /locus_tag="VFD73_25050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77246.1"
                     /translation="MRVSLVVPAILAAGSIPLPDHAAETGAAIIVEYVLPRPENFPHD
                     PAVAADGTVWYTDQRNSYIGHLDPATGKVVDYPTPTPGSGPHGITVAPDGGVWYTGQA
                     AGLLGRLDPKSGKIVEYPLPDGAKNPHTPIIYRGKVWFTDANNNSYGTLDLNTW"
BASE COUNT          231 a          409 c          391 g          219 t
ORIGIN      
        1 gcggcaccgt accggcggtc ttcattccgc gcgactcgac agatgcaggg catcccatgc
       61 acagcccccc gaagctccgc gccgacgtcg gtagcagctc gcgagaagcc tctgccgccc
      121 tcggcatcac agtggggaac acactgacca tgccgaagca gttcgttcga ctggcgggaa
      181 gcagggccac cgggagatcg tttgatgacc gggtcgggtc ggccgcacaa attctggcgg
      241 tgcggcggct cgacccggcg cacctgcgcc accgggtcat cttcatctgg agtgtccggg
      301 aggaggtcgg attggaggga gcccaggctg cggcccacgc tctgggtctc cgaactgcac
      361 gcgtccatgc catcgacacg ttcgtgagcg ccgattctcc tttggagatc agcaccttcg
      421 ccgtcgcgcc tctggggcag ggggcagtcg cccgggcgtt ggacaacagt tcggtcaccc
      481 ctcccgccta tgtagactcc ctgatccagc tggcccggcg tcacggtatc ccgctacagg
      541 taggcaccac caacggtggc aatgatggat cggttttcgg agactatgga gttcctgacg
      601 ttccgatcgg ctggccgctg cgctatgccc attcgccggc tgagacgatc gatctcaggg
      661 acgtggagag tctggctgag ttgatccgcg ccgtagctga ggactggtga ggagaccatg
      721 gaaccggggt gcgctcggga gcgtcgtggt agaacacttt tgtcacccgg aggagcaccc
      781 atgcgcgtga gccttgttgt ccccgccatc ctggctgccg gcagcattcc actgcctgac
      841 cacgccgcag aaaccggcgc cgctattatc gtggagtacg tcctgccccg tccggagaac
      901 ttccctcacg atcccgcagt agccgccgat ggcaccgtct ggtacactga tcagcgcaac
      961 agctacatcg gacatctgga tccagcgacc gggaaagtgg tggattaccc gacccccact
     1021 ccgggctccg gtccgcacgg gattacggtc gctcccgacg gaggcgtctg gtataccgga
     1081 caggcagctg gcctgctggg aaggctcgac cccaagagcg gtaaaatcgt cgagtatccg
     1141 ctgccggacg gagcaaagaa cccgcacacc ccgattatct accgcgggaa ggtctggttt
     1201 accgacgcca acaacaacag ctacggtacg ctggacctca acacctggaa
//
LOCUS       DASRPQ010002216         1374 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2163885, whole genome shotgun sequence.
ACCESSION   DASRPQ010002216 DASRPQ010000000
VERSION     DASRPQ010002216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1374
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2163885"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..690)
                     /locus_tag="VFD73_25055"
     CDS             complement(<1..690)
                     /locus_tag="VFD73_25055"
                     /inference="COORDINATES: protein motif:HMM:NF016763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HZI77247.1"
                     /translation="MIGWIQRRWPLLLACAGLLVILVATLKPMPDQAAASRATPLWCL
                     ICGQNGGVDVADNILLFIPLAFGLRLSGVPRTRVLVAGAALSLTIELLQLSVIPGRDA
                     SLSDVLTNTLGTWLGSILAGRWPSLVRPTKPQALRLAAGGSMLWLILQSGTAYLLRPS
                     DIAGPYLSEWIPYKAGRRPFNGSVNFAAVAGLPVPQGIHPDYPELSRRLRSGNIDVEL
                     ALTSRDVQPHWS"
     gene            complement(736..>1374)
                     /locus_tag="VFD73_25060"
     CDS             complement(736..>1374)
                     /locus_tag="VFD73_25060"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZI77248.1"
                     /translation="QARITLGVLGALPMGASILDVGGGHGQIAPPLIEAGYEVTVAGS
                     HPVCSARLQPWIDNGRCRFDVVDLQALPYGEASFDAVVCLRLLPHSIDWKNLVRELCR
                     VAARSVVVDYPSVRSANILSSQLFAMKRGIELNTRHFMTFSPREIHSAFKEAGFIVRA
                     ERPQFLIPMVVHRLGKRALLSRALEVPGRLLGLTRWFGSPIIVRADRQATRV"
BASE COUNT          294 a          438 c          431 g          211 t
ORIGIN      
        1 ggaccaatgc ggttggacgt cccgggatgt cagagccagc tccacgtcga tgttccctga
       61 ccgcaaccgc cgggagagtt cggggtaatc tgggtggatc ccctgcggaa ccggcaatcc
      121 tgccaccgcg gcaaagttta cgctcccatt gaaggggcga cggccggcct tgtagggaat
      181 ccactcactg aggtacggac cggcaatgtc cgacggcctc aacaggtacg cggtcccact
      241 ctgaaggatc agccatagca tgcttcctcc cgcggcgagc cgcaacgctt gcggcttcgt
      301 gggccgcacc agcgacggcc accggccggc caggatgcta cccagccagg tgcccaacgt
      361 gttggtgaga acgtcgctga gactcgcgtc acgacccggg atgacactca gctgcagaag
      421 ctcgatggtg agggagaggg cagctcctgc gacaagtaca cgggtgcgcg gaaccccgct
      481 caggcgcagc ccgaaggcca aaggaatgaa cagcaggatg ttgtcggcga catctacccc
      541 gccgttctgc ccgcaaatca aacaccagag gggggtggct cgagacgcag ccgcttgatc
      601 cggcatcggc ttcaaggttg caacgagaat cacaagcagg ccggcgcagg cgagcagcag
      661 tggccagcgg cgctggatcc agccgatcac tcgagagaga tactcggaca gtcggtgtac
      721 agggcccgca gccgattaga cccgcgtcgc ttggcggtcg gcacggacga tgattggaga
      781 gccgaaccac cgggtaagac cgagcagccg gccggggacc tcgagcgccc gactcagcag
      841 ggcacgcttg cccaatcgat ggaccaccat aggtatcaga aactgcggcc gctcggcacg
      901 aacgatgaac ccggcctcct tgaacgcgga atggatttca cgcggggaga aggtcatgaa
      961 gtggcgagta ttcaactcga tgccgcgctt catggcgaac aattgcgagg agagaatgtt
     1021 ggcgctccgc accgagggat aatccaccac caccgatcgg gcagcgaccc ggcacagctc
     1081 ccggaccaga ttcttccaat caatgctgtg cggcaacagc ctgaggcaca ccaccgcgtc
     1141 gaaggaggcc tcgccgtagg gtagcgcctg caggtctacc acgtcgaagc gacatcgacc
     1201 gttgtcgatc cagggctgca gccgtgcgct gcacactgga tggcttccag ccactgtcac
     1261 ttcgtaccct gcctctatca gtggtggtgc aatctgccca tggccaccgc ccacatcgag
     1321 aatggaggct cccatgggaa gtgctccaag cactcccagc gtaatccgcg cctg
//
LOCUS       DASRPQ010002217         3528 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1191229, whole genome shotgun sequence.
ACCESSION   DASRPQ010002217 DASRPQ010000000
VERSION     DASRPQ010002217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3528
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1191229"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..980)
                     /locus_tag="VFD73_25065"
     CDS             complement(<1..980)
                     /locus_tag="VFD73_25065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI77249.1"
                     /translation="MRRSFLKKLGLDRPELRAWAMYDWAASAMQTTIMVAVFPIYFVK
                     VAGAGLAESGATQRLATVNTLALVIIAVLSPILGAVSDYRGDKKRPLAAFMVIGILAV
                     LGMYFIEQGDLGLASWLFTISLIGVTGSFVFYEALLPHIARPDEIDRVSSAGYALGYV
                     GGGILLALNLAWIQRPDWFGLPHGPGLSPSERTLPVRLAFLSVAVWWAVFAIPLFRRV
                     PEPIRTLEPDELRDARPVRMAFVRLGETFRELRSYREAFLMLLAFLIYNDGIQTIIKM
                     ATAYGTELGIGQSALIGAILLVQFVGIPCSFLFGTVAGRIGAKQALFLGLL"
     gene            complement(1165..2079)
                     /locus_tag="VFD73_25070"
     CDS             complement(1165..2079)
                     /locus_tag="VFD73_25070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002640542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HZI77250.1"
                     /translation="MWLGFTALVVALLVLDLGVLNRRSHALSLKEAGAWSGGLIGLAL
                     AFGLFVWWQEGAHHALEYYAGYLIELSLSVDNLFVFLLIFSYFGVRPEAQPKVLKWGI
                     LGAIVMRLVMIALGALLLNRFTWIVYVFGGLLVLTGIRMFAQKDEVVDLERNPVARLA
                     RRILPFSNAYDGTKFFTRTVQGRRLATPLLLVLLVVEWSDLVFAIDSIPAIFAVTRDP
                     FLVYSSNVFAILGLRALFFVLAGMLDRFVYLKTGVAFILVFVGLKMLVSAWFHLPVLI
                     SLAVIVMTLAVSVILSLRHGAREPRLAS"
     gene            complement(2101..2934)
                     /locus_tag="VFD73_25075"
     CDS             complement(2101..2934)
                     /locus_tag="VFD73_25075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloprotease HtpX"
                     /protein_id="HZI77251.1"
                     /translation="MNNVKTFVLLAGLLGLFLMVGQLIGGSSGLLAALVFGSAFNFIM
                     YFFSDRLVLRMYGAQVITPEQAPELYAMVDRLRQRAGLPMPRVAIAPHEQPNAFATGR
                     NPEHAVVAVTTGILKHVPQEELEGVLAHELAHVKNRDMLITTVAAGIAAALTNLPYLL
                     MFGGGRDDDRGSPYAQLGLILLAPIGAMLMQFAVSRQREFEADRVGAQILGRPTPLAH
                     ALVRLDALAHQIPMRVAPAAAPLAQVNPLTAGGAFTRLFSTHPPTAERVARLQAMVPG
                     R"
     gene            complement(3204..>3528)
                     /locus_tag="VFD73_25080"
     CDS             complement(3204..>3528)
                     /locus_tag="VFD73_25080"
                     /inference="COORDINATES: protein motif:HMM:NF015419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77252.1"
                     /translation="TFELFARPAIRKMMGQPLPYRRSIQVRLAEPIRLKPKLQHFLRG
                     IVSERAGTLEARLTGPQGSGILTSMVLANALLVIPEGQFETPAGAPVQALMLDDPVHQ
                     ATPGF"
BASE COUNT          783 a         1085 c         1098 g          562 t
ORIGIN      
        1 aggagtccca gaaacagcgc ttgctttgcc ccgatccgac cggccaccgt cccgaagaga
       61 aacgaacagg ggatgccaac gaactgcacc agcagaatcg ccccgatcag agcgctttga
      121 ccgatcccca gctcggttcc ataggcggtg gccatcttga tgatcgtctg aatgccatcg
      181 ttatagatca gaaaggccag cagcatcagg aacgcctccc ggtagcttcg gagctcccga
      241 aacgtttccc ccaatcgcac gaacgccatc cgcaccggcc gcgcatcgcg cagctcatcc
      301 ggctccagcg ttcgaatcgg ctcgggaact cggcgaaaga gcgggatggc aaagaccgcc
      361 caccacaccg cgaccgagag gaaggcgagc cggacgggaa gggtccgctc cgatggagac
      421 aggccgggac catgggggag tccaaaccag tcgggccgtt ggatccaggc gagattcagc
      481 gccagcagaa tgccgcctcc tacatatccc agcgcatagc cggcgctgga aacccggtcg
      541 atttcatcgg gccgtgcaat gtgcggaagc agcgcttcat aaaagacgaa gcttccggtc
      601 actccaatga gggagatggt gaacagccac gacgccagcc cgagatctcc ctgttcgatg
      661 aaatacatcc cgagcaccgc caagatgccg atcaccatga atgccgcgag cggccgcttc
      721 ttgtcgcccc gatagtcgga taccgctccg agaatgggtg agaggacggc aatgatgaca
      781 agcgcgaggg tattcacggt ggccagacgc tgcgtcgctc cactctcggc cagaccggca
      841 ccggcgacct tgacgaagta gatcggaaag accgcgacca tgatcgtggt ctgcatggcg
      901 gaggcagccc agtcgtacat cgcccaggcc ctcagctccg gccggtcgag gccgagcttc
      961 ttgaggaacg aacgtcgcat ggtcggggaa agtagggacg gcgggacgag caggtaagac
     1021 cgaaagcaac catttggggg ttggcgcggt ccaagctgcc atgacggagc acctgaggaa
     1081 cgcggcgatt gcctgcggtt ttgcctttgc gctaagcccg agtgtggcag cagatcgtta
     1141 tcgggatgcc aacttccagc cctgtcagga agccagtcga ggttccctgg cgccgtggcg
     1201 gagcgagagt atcacggaaa ccgccagagt catcacgatc acagcaaggg agatcagaac
     1261 cggcaggtgg aaccaggcac tgaccagcat cttcagaccg acgaacacca gaatgaaggc
     1321 gacaccggtc ttgaggtaca cgaagcggtc gagcattcca gccagcacga agaagagcgc
     1381 gcggaggccg aggatcgcga acacattcga gctgtaaacc aggaagggat cccgtgtcac
     1441 cgcaaagatg gcagggatgc tatcgatggc gaataccaga tccgaccact ccaccaccag
     1501 aagcaccagc aggagcggtg tcgccagtcg ccgaccctgg acggtccggg tgaagaactt
     1561 ggtcccgtca tacgcgttac tgaagggaag gatccgccgc gccagccgcg ccaccggatt
     1621 gcgctccagg tccaccactt cgtccttctg ggcgaacatc ctgatcccgg taagaacgag
     1681 cagcccgcca aagacataga cgatccaggt gaatcggttc agcagaagag cgccgagtgc
     1741 gatcatcacc aggcgcatga caatggcgcc cagaattccc cacttcagca ctttcggctg
     1801 cgcctccggt cgcacgccaa agtaggaaaa gatcaggaga aaaacgaaga gattatcgac
     1861 gctgagagac agctcgatca ggtatccagc atagtactcc agcgcatggt gggctccttc
     1921 ctgccaccac acgaagagtc cgaaggcaag tgccaatcca atgaggccgc cgctccatgc
     1981 tcctgcctcc ttcaagctca gcgcatgcga gcggcggttg agtactccca gatcgagaac
     2041 cagtagggcc acgaccaggg cggtgaatcc cagccacacc tgtagctcgt ggtggcccac
     2101 ttagcggccc ggaaccattg cctgcaaccg agccacgcgc tcagccgtcg gcgggtgagt
     2161 gctgaacagc cgggtgaacg cgcctccagc ggtcagcggg ttgacctggg ccaggggggc
     2221 tgccgccggc gccactcgca tcgggatctg gtgggcaagg gcatccaacc gcaccagcgc
     2281 gtgcgccagc ggagtcggac ggccgagaat ctgcgctccc acccggtcgg cctcgaactc
     2341 gcgctgacgg gaaacggcga actgcatcag catagcgcca atgggagcga gcagaatcag
     2401 cccgagctgc gcgtaaggac tgccacgatc atcatcccgg cctccaccga acatcaggag
     2461 atacggcagg ttggtgaggg ccgcggcaat ccctgccgcc acggtcgtga tcagcatgtc
     2521 ccggttcttc acgtgagcca attcgtgggc cagaacgcct tcgagctctt cctgagggac
     2581 gtgcttcaga atccccgtgg tgaccgcgac cactgcgtgc tcgggattgc ggccggtggc
     2641 gaaggcgttg ggctgctcgt gcggcgcaat ggccacccga ggcatgggca ggccggcgcg
     2701 ctggcgcagg cgatctacca tggcgtagag ctccggcgcc tgctccggcg tgatcacctg
     2761 ggcgccatac atccggagga ccagccgatc ggaaaagaag tacatgatga agttgaaggc
     2821 gctgccaaag acgagcgccg ccaacagccc gctggagcct ccgatgagct gtccgaccat
     2881 gagaaatagg ccgagcaatc ccgcgagcaa tacgaaggtc ttgacgttgt tcatgtgctc
     2941 ccccttggtg gggtctaata aaaaaagcga gaccccgtcc gctccgcttt cgcgtggacg
     3001 aaggtctcgc tctaaggtgc agcgcggtgc cgctgctgcc tcccgaatga accgtgctcg
     3061 cgctaggcga acagtcttga cgattcattc gtccgcccgc tggggcggat aagctactcc
     3121 ccttcaactg acgggaaatt tatgctggtc gaagacggtg gtcaacgagg caattagatg
     3181 cgacagcgtg ctcgagttgt gaatcaaaat cccggcgtgg cctggtgtac ggggtcgtcc
     3241 agcatcaagg cctggacggg cgcgccggcc ggggtctcaa attgaccttc gggaatgacc
     3301 agaagcgcat tggccaggac catggaggta agaatccctg atccttgagg tccggtgagg
     3361 cgcgcctcca aggttccggc cctttcgctc acgatgcctc gaaggaagtg ctgcagtttc
     3421 ggcttcagcc tgatcggctc cgccagtcga acctggatcg accgccgata cggaagtggc
     3481 tggcccatca ttttccgaat tgcggggcgg gcaaacagct cgaaggtg
//
LOCUS       DASRPQ010002218         1123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3073809, whole genome shotgun sequence.
ACCESSION   DASRPQ010002218 DASRPQ010000000
VERSION     DASRPQ010002218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3073809"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..648
                     /locus_tag="VFD73_25085"
     CDS             <1..648
                     /locus_tag="VFD73_25085"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HZI77253.1"
                     /translation="VYGWSEMMVRKKDPATVPKAAFEVLDSAHQAVGLINDLLDLSRL
                     DEDRLKPVIRATEPASVARRAQQRVTPAAAARNVKLELEFAPGLPSCQTDVSRVEQIL
                     INLLGNAINHTPEGSAVRLGVTSDGSTVLFTVEDQGHGIEESEIERIFDIYVTKPVGE
                     GHGAGLGLPLSRRLARLLGGELRAVPRPGQGGCFILELPASPNSEETFIQASAAS"
     gene            673..>1123
                     /locus_tag="VFD73_25090"
     CDS             673..>1123
                     /locus_tag="VFD73_25090"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI77254.1"
                     /translation="MKILVVEDDRKVAGFIEQGLKEEGYVVDVAPDGDEATMLAHVYE
                     YDLILLDIVLPKKNGFQVAAELRREGRNTPILMLTSRDAVEDVVRGLDSGADDYLAKP
                     FQFDELLARIRALHRRGGSERLEVLRYPPIELDRLRHLATMNGKRLDL"
BASE COUNT          207 a          328 c          380 g          208 t
ORIGIN      
        1 gtctatggct ggtcggagat gatggttcga aaaaaggatc ctgccaccgt gccgaaggcg
       61 gcgttcgagg tgctcgattc ggcccaccag gcggtcggtc tgatcaatga cctcctggat
      121 ctgagccgcc tggatgagga tcgcctgaag ccggtcatcc gggccactga gccggcctcg
      181 gtggcgcgcc gggcgcaaca gcgggtgacg ccggctgccg cggctcgaaa cgtcaaactg
      241 gagctggaat tcgcccctgg tcttccgagc tgccaaactg atgtcagccg ggtagagcag
      301 atcctcatca acctgctggg gaacgcgatc aatcacacac ctgaagggag cgccgtgcgg
      361 ctgggcgtga ccagcgatgg ctcgaccgtg ctcttcacgg tggaagacca gggccacggt
      421 atcgaggaga gcgagattga gcggatcttc gatatctatg tgaccaaacc ggtgggcgag
      481 ggtcacgggg ccggactcgg tctcccgctc tccaggcgat tggcccggct tctgggggga
      541 gaattgcgag cggtgccacg gcccggtcag ggcggatgtt tcatcctcga gttaccggcg
      601 tccccgaact ctgaagaaac cttcatccag gcttcggcgg cctcttaggc agccgttcct
      661 agattccagc ctatgaagat cctcgtggtg gaagacgacc ggaaggtcgc tgggttcatc
      721 gaacagggct tgaaggagga gggctacgtg gtggacgtcg cgccagacgg cgatgaggcc
      781 actatgctgg ctcacgtata cgaatacgat ctgattctgc tcgacatcgt gcttcccaag
      841 aagaacggct tccaggtcgc tgccgagctg cggcgcgaag gccggaacac gccgatcctg
      901 atgctgacct cgcgagacgc ggtggaggat gttgtccggg ggctggattc cggggccgat
      961 gactacctgg cgaagccatt tcagttcgat gagctgttgg cccggattcg tgccctgcat
     1021 cgtcgcggcg gctccgagcg cctggaggtc ctgcgctatc cgccgatcga gctggaccgg
     1081 ctgcgccacc ttgcaaccat gaacggcaag cggctggacc tga
//
LOCUS       DASRPQ010002219         1225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2443683, whole genome shotgun sequence.
ACCESSION   DASRPQ010002219 DASRPQ010000000
VERSION     DASRPQ010002219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2443683"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..438)
                     /locus_tag="VFD73_25095"
     CDS             complement(<1..438)
                     /locus_tag="VFD73_25095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77255.1"
                     /translation="MKAVAAAVLARRPRSSTLWRVAPHVGPYFGRGSHWTTSEDSARG
                     LQRWLEEISPVRRAIYRAEVQLSDVFEAPPGILLRLSEVARCVAMAWPQGYRWLTFYE
                     AGEWDSRLVRQYVYLGCDPIPVVPATDAPPRATSHLYLDWRPGG"
     gene            645..923
                     /locus_tag="VFD73_25100"
     CDS             645..923
                     /locus_tag="VFD73_25100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77256.1"
                     /translation="MNNDAKGTTRPQVRSGPLITGAVLVGAGTFLVLIGLAVGSSHLL
                     SVTRQRVREMEVPPNELAKQKYAQARAAVAAGTAAWQNGIPTQAASVS"
     gene            complement(947..>1225)
                     /locus_tag="VFD73_25105"
     CDS             complement(947..>1225)
                     /locus_tag="VFD73_25105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77257.1"
                     /translation="NPASGEGFISDDQMRVLNIAIRRATHEALSQVDMAHRAVLQSRH
                     RELRTEEQEALDFCGFQLRTIGAYMEPPGSPELEKAYQRYISEPDVNR"
BASE COUNT          220 a          406 c          394 g          205 t
ORIGIN      
        1 ccctcccgga cgccagtcaa ggtaaaggtg actggtcgcg cgcggcggag catctgtggc
       61 cggtactacc gggatcggat cacatcccag atacacatac tgcctgacca gccgggagtc
      121 ccactcccct gcttcataga aggtcagcca tcggtatccc tgaggccacg ccatggccac
      181 gcacctcgcc acttcggaca gccgcaggag gatcccaggg ggcgcctcaa agacatcgga
      241 cagctgaacc tcggcccggt agatcgcgcg gcgaacgggg gaaatctctt caagccagcg
      301 ctggagcccg cgagcgctgt cttctgatgt agtccagtga cttccccggc cgaagtaggg
      361 cccgacgtgc ggtgccacgc gccagagcgt cgagcttcgg ggtcgccggg ccaggactgc
      421 cgccgccaca gccttcacgc atcctccctg aacccggcag gagcacgacc ggcaagcccg
      481 ctgccgcaac taactcaagc ctcaggcctc ccgcccgtcc tgcgtatcac ccgtcacggg
      541 tggctcacgg ggtagaaaac ggcgccgtca cccagggcgg gtggtgtcaa tttctatccg
      601 gatgaggaca gtattgatca cgaaccgacc gtgaggatgg tggcatgaat aacgacgcga
      661 aaggcacgac caggccgcag gtcaggagtg gcccgctgat taccggcgct gtgctggtgg
      721 gagccggtac ctttctcgtc ctcattggcc tagccgtggg cagctcgcat ctgctgtcgg
      781 tcacccggca gagggtgagg gagatggagg tcccgccgaa cgagctggcg aaacagaagt
      841 acgcgcaagc ccgagccgcg gtggccgccg gtacggccgc ttggcagaac gggatcccga
      901 cccaggcggc cagcgtttcc tgacccttcg tccgcgcggg tcgcggttac cggttgacgt
      961 ccggctcgct gatgtaacgc tggtacgcct tctccagctc gggcgagccg ggcggctcca
     1021 tataggcacc gatggtcctg agctggaatc cgcagaaatc cagcgcttcc tgctcttcgg
     1081 tgcgcagttc ccgatggcgc gattgcagga cggcgcgatg ggccatatcc acctggctca
     1141 gcgcctcatg cgtggcgcgg cggatcgcga tgttgagcac gcgcatctga tcatcgctga
     1201 tgaatccctc tccactggcc gggtt
//
LOCUS       DASRPQ010002220         1171 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_265028, whole genome shotgun sequence.
ACCESSION   DASRPQ010002220 DASRPQ010000000
VERSION     DASRPQ010002220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_265028"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(140..1000)
                     /locus_tag="VFD73_25110"
     CDS             complement(140..1000)
                     /locus_tag="VFD73_25110"
                     /inference="COORDINATES: protein motif:HMM:NF013226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HZI77258.1"
                     /translation="MLHTRPIEWPIVAAHTAVGYLLAVGVSGALLGQRVGPAVLGVLL
                     WVIALNGGTLALNSAYDRDEGDIAYLRRPPPAPPHLAAFGLMLMTAGAAAALTLPRRY
                     LAVYLLCFVLSVLYSVPPFRLKAVAGVDLLINMWGFGTLTPYAGWAATDLPVGPVGRM
                     ILLGFCPLFAALYPLTQIYQIEEDTARGDRTLAIILGVPASLWLSLLGATAAFALFGF
                     AAVRAGWSAGDRWRWLVLVLAALAWVVVLLPWLRRHRRMNPQQHQHGMYRALLAWAIT
                     DVAVVLAWAT"
BASE COUNT          255 a          364 c          391 g          161 t
ORIGIN      
        1 acggcaccgg tcacaatcca gggcacggcc gtgagatcgt aatcgtctct cggttccacc
       61 gtcgaggtca tgtcggctcc gctgaggttg gaactcaaag ataccgggac ggcaacagta
      121 gggccacagc gtgagcggtt caggtggccc acgccagcac cacggcgacg tcggtaattg
      181 cccatgccag aagcgcacga tacatgccgt gctgatgctg ttgcggattc atccgtcggt
      241 gcctccggag ccacggcaag agaacgacga cccaggccaa tgcggcaagc accagcacga
      301 gccagcgcca cctgtctcca gcgctccagc cggcgcgaac tgcggcgaag ccgaagaggg
      361 caaaggcggc cgtcgcgccc agcagagaaa gccagagact tgcgggaacc cccaggatga
      421 tcgccagggt ccgatcgcct cgggcggtgt cctcctctat ctgatagatc tgggtcagcg
      481 gatagagcgc cgcgaacaac ggacagaagc cgaggaggat cattcgccca accggtccga
      541 ccgggagatc ggtcgctgcc cacccagcgt agggcgtcag cgttccgaag ccccacatat
      601 tgatgagcaa gtccactcct gccaccgcct tcaggcggaa aggaggaacc gagtaaagca
      661 ctgagagcac gaaacagagc aggtacacgg caaggtagcg ccgggggagt gtgagcgcgg
      721 cggcagcgcc ggccgtcatg agcatcaagc cgaaggctgc gagatgaggc ggggccggag
      781 ggggtcggcg gaggtatgcg atatctccct cgtcccggtc ataggcactg ttgagggcaa
      841 gcgtcccgcc gttcagtgcg atgacccaaa gcagcacacc aagaactgca ggcccaacac
      901 gctggcctaa gagggctccg ctgaccccga cggccaggag ataacccacc gctgtgtgtg
      961 ccgcgacaat gggccattcg atcgggcggg tgtgcagcaa gtaatcgaat cgtgagccaa
     1021 ggaggcggta cccccaccgg cggccccggc ctaccacacc agtccgagat gcttcgcggc
     1081 tatgcggagt cctcgaagag tgagatccgg atcggtcagt tcgatggccc gggtgagtgg
     1141 agcgaccagt ggggccaggc cacccgtggc g
//
LOCUS       DASRPQ010002221         1104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2801316, whole genome shotgun sequence.
ACCESSION   DASRPQ010002221 DASRPQ010000000
VERSION     DASRPQ010002221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2801316"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..895
                     /locus_tag="VFD73_25115"
     CDS             <1..895
                     /locus_tag="VFD73_25115"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HZI77259.1"
                     /translation="KESASVNNVIVLIKLAVVLLFIVLAAPHVNPANWHPFIPPNTGS
                     REHFGFSGVVAGAAIVFFAYIGFDSVTTTAQEAKNPQRDMPIGIIGSLIICTLLYIIV
                     SAIATGVMRYSELDVPDPIAHVADYAGLGVFATLIKIGAIAGLTSVILVQLLGQSRVF
                     YAMSRDGLLPPFIRKIHPRFRTPYITSIITGVAVSIPAAILPVRDAAKLVSIGTLLAF
                     VIVCTGVLVLRIREPELRRPFKTPLVWFVAPMGTLSAAYLMAYLDKETWIRLLVWLVI
                     GLTIYFSYSRAHSLLASKRDL"
BASE COUNT          180 a          355 c          319 g          250 t
ORIGIN      
        1 caaggaatcg gcgtcggtca acaatgtgat cgttctgatc aagctcgcgg tggtgctgct
       61 cttcatcgtt ctcgcggcgc cccatgtgaa cccggcgaac tggcacccgt tcattccgcc
      121 gaacaccggc tcacgggaac acttcggctt cagcggcgtg gtggccggtg ccgccatcgt
      181 gttcttcgcc tatatcggat tcgactcggt taccacgacc gcacaggaag ccaagaaccc
      241 ccagcgcgac atgccgatcg ggatcatcgg atcgctgatc atctgcaccc tgctctacat
      301 catcgtgtcc gccatcgcca ccggcgtgat gcgctacagc gagttggacg ttcccgaccc
      361 cattgcccac gtggccgatt atgccggttt gggagtgttt gcgaccctga tcaagatcgg
      421 tgcaatcgcc ggactcacct cggtgattct ggtgcagctg ctcgggcagt cgcgagtgtt
      481 ctatgcgatg tcgcgcgatg gactgctgcc gccgtttatc cggaagattc atccccggtt
      541 ccgcaccccc tacatcacct cgatcatcac cggcgtcgcg gtctccatcc cagcggcgat
      601 ccttccggtc cgtgatgccg ccaaactggt atcgatcggg acattgttgg ccttcgtcat
      661 cgtgtgcacc ggggtgctgg tgctccggat ccgggagccc gaattacgtc gtcccttcaa
      721 gaccccactg gtctggttcg tggctccgat gggcaccctc tcggcggcat acctgatggc
      781 ctacctcgat aaggagacct ggattcggct cctggtgtgg ctggttatcg gcctgactat
      841 ctacttctcg tatagccggg ctcattcttt gttggcgagc aagcgggacc tgtagcggga
      901 gctggacggg cagcagtttc tgcgaggcgg cgaagccgcc gctccgccca gtgcgatctc
      961 ctggctcccg cattcctgat tactattgga aatgacgttt tcgttacctc ccgagaaggc
     1021 cgctctggca aagtcctttg ccgaggcact ccgtcccggg cagcgggtct gtctcaccac
     1081 ccatgtgaat gcagacggtg acgg
//
LOCUS       DASRPQ010002222         2208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4324297, whole genome shotgun sequence.
ACCESSION   DASRPQ010002222 DASRPQ010000000
VERSION     DASRPQ010002222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2208
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4324297"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..456)
                     /locus_tag="VFD73_25120"
     CDS             complement(<1..456)
                     /locus_tag="VFD73_25120"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI77260.1"
                     /translation="MAGSVLLIDDDVDVLRSIGNYFERFGYEVTRELSGEAGLATFDR
                     LRPEVVILDLGLPGMDGMEVLEHLRQRDASVILLTGQADVPTAVRAMQLGAENFLTKP
                     VDMEHLAAATARVADKARLRRINEALLTQSAPGHGLDSLGASSGMQDFAH"
     gene            complement(500..1435)
                     /locus_tag="VFD73_25125"
     CDS             complement(500..1435)
                     /locus_tag="VFD73_25125"
                     /inference="COORDINATES: protein motif:HMM:NF039905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HZI77261.1"
                     /translation="MTRALLIANPVAARTADSSTTAVANTLRRGGWTTEVMSTTGPGH
                     ARELAEHGVAEGVDVVAVFGGDGTTMQAAAALVGTDVVLGVIPGGTGNLLAGNLRIPA
                     SPARAARALLTAAPHHFDLGCVERDGGIHYFAVACGAGYDARVMAATMTQHKRRWGMA
                     AYAATSLRLIGDIRSTLHHITVDGMQFDAHASMVLVANCGEVIPPFIRLRPGISPEDG
                     LLDVIVVRADSFSQSVRAVWDLLRVAPGVPGEGKFIGHARGREIRVVSDLVQPVQLDG
                     EPGGQTPFRATVVPQAIRILIPTRPRWRAWREQAE"
     gene            complement(1437..>2208)
                     /locus_tag="VFD73_25130"
     CDS             complement(1437..>2208)
                     /locus_tag="VFD73_25130"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HZI77262.1"
                     /translation="EANIQLGGEVQLSKAAKTYSPSGTLDALRGSYTLKIGPVTRDFT
                     VERGSVRYFGDLNAALDIRGVHVVRAVRGEEVPVIANITGTLYAPKVSLESTFNPPIS
                     ETDLVSYLVTGYPANEAARLGQANALETGLSYFSSALSSELERALIQDLGVPLDLIEI
                     RPGVTQGRGAQALTQLAAGWQLGSKTFLTFNAGFCPENLGQFSYNNLGASLEFRFSRE
                     WSLQTSVEPTLQSCRREFGVITSVPYQIGSDIKWEREF"
BASE COUNT          414 a          721 c          692 g          381 t
ORIGIN      
        1 gtgggcaaag tcctgcatcc cggaggacgc accgagagaa tccaacccgt gccccggcgc
       61 gctctgagtg agaagcgcct cattaatacg ccggagccga gccttatccg ccacgcgggc
      121 agtggcagcc gccaggtgct ccatgtctac cggtttggtg agaaagttct ccgccccgag
      181 ctgcatggca cgcaccgcgg tggggacatc ggcttgccca gtgagcagga tgactgatgc
      241 atcgcgctgt cggagatgct cgagcacctc catcccatcc atgcccggga gccccaggtc
      301 gaggatcaca acttcaggac ggagacgatc gaacgtggcc agcccggcct cgccgctcag
      361 ctcccgagta acctcgtagc cgaaccgctc gaagtagttg cctatgctgc gcaaaacgtc
      421 gacatcgtcg tcgatgagga gaaccgatcc agccattatt acccttgagg aagcgagaaa
      481 gtcacccccc aaaaactagt cactcggcct gctcgcgcca tgcccgccat cggggccggg
      541 tggggatcag aattcggatc gcttggggaa cgacggtggc ccgaaatggg gtctgtcctc
      601 ccggttcgcc gtcgagctga accggctgga ccaggtccga gaccaccctg atttcccgcc
      661 ccctcgcgtg cccgatgaac ttgccttcac ccggcactcc cggcgccacc cgcagtaagt
      721 cccataccgc ccgcacgctc tgggaaaagc tgtcggcccg cacgacgatc acatccagca
      781 gcccatcttc gggagagatg cctggccgga gccgaatgaa aggcggaatg acctcgccgc
      841 agttcgcaac caagaccatc gatgcatgag cgtcgaactg catcccgtcg acggtgatgt
      901 ggtgcagggt gctccggatg tctccgatga ggcgaagact cgtggcagcg taggcagcca
      961 tcccccaccg ccgtttgtgc tgggtcatgg ttgctgccat gactctggcg tcatacccgg
     1021 caccacacgc cacggcgaaa taatggatgc cgccgtcgcg ctccacgcat cccagatcga
     1081 agtggtgggg tgcggccgta agcagcgccc gtgcggcacg cgcgggagag gcagggattc
     1141 gaaggttacc ggccaggaga tttccggtgc caccgggaat gaccccgagc accacgtcgg
     1201 tgccgaccag cgcagccgct gcctgcatcg tcgtgccgtc acccccgaag accgcgacga
     1261 catcgacccc ttctgccacg ccatgctccg ccagttcacg ggcgtgtcct gggccggtgg
     1321 tcgacatgac ctcggtggtc cagccacccc gccggagcgt gttggccacc gcggtggttg
     1381 aggaatccgc ggtgcgggca gcaacaggat tggcgatcag cagcgcccga gtcacctcag
     1441 aactcgcgct cccacttgat atccgacccg atctggtagg gcactgaggt gatgacccca
     1501 aactcgcgcc ggcaggattg cagggtcggc tcgacgctgg tctgaaggct ccactctcgg
     1561 ctgaaccgga actcgagact ggcgccgaga ttgttgtagc tgaattggcc gagattctcc
     1621 ggacaaaatc cggcgttgaa ggtcaggaag gtcttgctgc cgagctgcca gccggccgcc
     1681 agttgggtga gtgcttgagc accgcggccc tgggtgactc cgggccggat ctcgatgagg
     1741 tcgagcggaa cgccgaggtc ctggatcagc gcccgctcca gctcactgga gagcgcactg
     1801 gagaagtagg agagcccggt ttccagcgcg ttggcctgac ccagccgcgc cgcctcgttg
     1861 gctgggtagc cagtgaccag gtacgaaacc agatcagtct cggaaatcgg tggattgaag
     1921 gtgctctcta acgacacctt cggggcatag agggtgccgg tgatgtttgc gatgaccggc
     1981 acctcttcgc cccgcaccgc tcgtaccacg tgcacgcccc gaatgtcgag cgccgcgttg
     2041 aggtcaccga agtagcgaac tgatcctcgt tcgacagtaa agtcccgggt gaccgggccg
     2101 atcttcaggg tatagctgcc ccgcagggca tccagcgtgc cggatgggct gtacgtcttg
     2161 gccgccttgc tgagctgtac ttccccaccg agctgaatgt ttgcctct
//
LOCUS       DASRPQ010002223         1048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2164403, whole genome shotgun sequence.
ACCESSION   DASRPQ010002223 DASRPQ010000000
VERSION     DASRPQ010002223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2164403"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(226..738)
                     /locus_tag="VFD73_25135"
     CDS             complement(226..738)
                     /locus_tag="VFD73_25135"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HZI77263.1"
                     /translation="MATVSPNRVDHLDAALIELLTAEPRVGVLEASRRLRVARGTVQA
                     RLERLQERGVITGYGPKVDPAALGYEVTAFITLEIRQPGGHDPVAERLAAIPEVLEVH
                     TITGADDMLCRVVARSNADLQRVIDAIVSAEGVVRSSTLISLATQVPYRILPLLRAAA
                     HPGRQGTPVQ"
     gene            841..>1048
                     /locus_tag="VFD73_25140"
     CDS             841..>1048
                     /locus_tag="VFD73_25140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylpyruvate dioxygenase"
                     /protein_id="HZI77264.1"
                     /translation="MTTPSQDSFPVIGMDAVVFAVGNAKQAAHYYSTAFGMRRTAYRG
                     PETGYPDETVHVLESGSVRFVFRGP"
BASE COUNT          201 a          320 c          341 g          186 t
ORIGIN      
        1 cttgacacag gcagacgcgg cgctggctgc acctgcagaa aggtcctgcg cccacccggc
       61 gtgctagtgg atgacaatgc cagactaaat aggtcttcgt cccgaaaacc ggaaaggatt
      121 caccagggtt gacccctaat gtcgcataga tgccggcaga tgagatctgt tccgtgactc
      181 agcgtcgtat cacggttgaa tatcggcact ggagatattt actagctact ggactggggt
      241 gccctgccgg cccgggtggg cggccgctcg gagcaagggc agaatccggt aggggacctg
      301 cgtggcgagg gagatcagag tggacgaacg gaccacgcct tcggccgaga cgatcgcgtc
      361 gatcacgcgc tgcaggtcag cgttggatcg ggcgactacc cgacagagca tgtcatcggc
      421 gcccgtgatg gtatgcacct ccagcacctc ggggatagcg gccagccgtt cggcaactgg
      481 gtcgtggcca ccgggttggc ggatctcgag ggtaatgaat gcggtcacct cgtagcccag
      541 agcagccgga tccaccttgg gcccgtaccc ggtgatcacc ccccgctcct gcagtcgttc
      601 cagtcgggct tgcaccgtgc cacgggcaac cctgagccgc cgggatgctt ccagcacccc
      661 caccctgggc tccgcagtga gcagttcgat cagggcggcg tcgagatgat ccacccggtt
      721 gggtgagacg gtggccatag tgtacagaaa tatcactatc tgagcggtat tgctagtcaa
      781 tacgaccagc agtaccgcag ttgattgcac aaattgagaa tccttgcgca tgctagcggt
      841 atgacgacgc catcgcagga cagcttcccc gtcatcggca tggacgccgt ggtcttcgcg
      901 gtcgggaacg cgaagcaggc ggcgcactat tactccaccg cgttcggcat gcgccggacc
      961 gcgtaccgcg gcccggagac cgggtacccg gacgagacgg tccacgtcct ggagtcgggc
     1021 agcgtgcggt tcgtcttccg cgggccgg
//
LOCUS       DASRPQ010002224         1200 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_567494, whole genome shotgun sequence.
ACCESSION   DASRPQ010002224 DASRPQ010000000
VERSION     DASRPQ010002224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1200
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_567494"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1200
                     /locus_tag="VFD73_25145"
     CDS             <1..>1200
                     /locus_tag="VFD73_25145"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZI77265.1"
                     /translation="HVQFQFGDFTLLPQRASLLKAGQEVKLRPKVYDALLYLIENRGR
                     LVPKEELIQALWPEAFVTDDSLVQCMVELRRALDDRSQEILKTIPRRGYIFAAPVNPD
                     AVGSQNISEEKSNSPQNPPDNQALPVARTPLVGRERELHAVRQLLLDPAVRLVTLTGA
                     GGSGKTRLGLELCRELVETFGHRVYFVGLGSISDPVMVPAAIAESVGIRETGGRPFID
                     LLKSHFRDGEPSPVLLLLDNLEHILSASAFVVDLIEASRTLKVLVTSRAPLRVYGEHE
                     FPVPPLALPDPHHLHSLSALIGNPSVSLFAQRAAAVKPDFQLTVENAAAVAEICSRVD
                     GLPLAIELAAARVKMLPLSGILTRLQSRLQLLTAGARDLPQRQQTLRNTIDWSYDLLH
                     EGEQKLLR"
BASE COUNT          221 a          378 c          348 g          253 t
ORIGIN      
        1 cacgtccaat ttcaatttgg ggacttcacc ctgctgcccc agcgggcgtc gctgctcaag
       61 gcaggccagg aggtcaaact ccgtcccaag gtttacgatg cgcttctcta tctgatcgag
      121 aaccgcggcc gcctggttcc caaggaggag ttgattcagg ctctttggcc tgaggccttt
      181 gtgaccgacg actcgctagt gcaatgcatg gtggagttgc ggcgagcgtt ggacgaccgc
      241 tcgcaggaga tcctgaaaac gattccgcgc cgcggctata tctttgcggc cccagtcaac
      301 cccgacgcgg tcggctcaca aaacatttcc gaagaaaaat ctaactctcc ccagaacccg
      361 cccgacaatc aggctcttcc ggtggcgcgg actcccttgg tcgggcgcga gcgggaactt
      421 cacgcagtcc gacaattgtt gctcgatccc gccgtccggc tggtcaccct caccggagcg
      481 ggcggctcag gaaaaaccag actcggcttg gagctgtgcc gtgagttggt agaaaccttc
      541 gggcaccggg tttatttcgt gggcctggga tcgatcagcg acccggtcat ggttcctgct
      601 gccatcgcgg aatcggtagg gattcgggag accggcggcc gcccattcat cgacctgctg
      661 aagagccact tccgggacgg cgagccttct cctgtgcttt tgctgctgga caatctagag
      721 cacatcctgt cggcttccgc attcgtcgtg gacttgatcg aagcctcccg gacgctgaaa
      781 gtactcgtca ccagccgggc gccactgcga gtttatggcg aacacgaatt ccccgtgccg
      841 cctctggccc tgcccgatcc tcatcacctg cactcgctct cggcattgat cgggaatccg
      901 tcagtgtctc tgtttgccca gcgtgcggcg gcggtgaagc ctgattttca actcactgta
      961 gagaatgctg cggcggttgc cgagatttgc tcccgagtgg atggtctccc gctggccatt
     1021 gaactggctg ccgcccgagt gaagatgttg ccgctgagtg gaattctgac acgcctccag
     1081 agccggctcc agcttttgac cgccggagcc agggatcttc cccagcgcca acagacgctg
     1141 cgcaacacca ttgactggag ctacgacttg ctgcatgaag gcgagcaaaa actgctccgc
//
LOCUS       DASRPQ010002225         1992 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2801650, whole genome shotgun sequence.
ACCESSION   DASRPQ010002225 DASRPQ010000000
VERSION     DASRPQ010002225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1992
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2801650"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /locus_tag="VFD73_25150"
     CDS             complement(<1..392)
                     /locus_tag="VFD73_25150"
                     /inference="COORDINATES: protein motif:HMM:NF017984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crosslink repair DNA glycosylase YcaQ family
                     protein"
                     /protein_id="HZI77266.1"
                     /translation="MHSKRAKAATTTVSIADRRLANQRIIRPAPPSPEKIVAWFGAVQ
                     AQEYGPAKWGLGLRARGGVTDAAVERAIHRGRILRTHLLRPTWHFVSSADIRWMLELT
                     APQVHRRMSPYDQQLGLDSRVMSRALGV"
     gene            complement(392..715)
                     /locus_tag="VFD73_25155"
     CDS             complement(392..715)
                     /locus_tag="VFD73_25155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77267.1"
                     /translation="MAHYLVSARPVSSLLDDLESKLQQHAFRDLQPFGQALSSSLESA
                     RLLPDGTAVWEEEDYCRPPLAQERAAVLDRYFEALAVEAVAEGTGWQRIAELPPLFPA
                     LIGTF"
     gene            802..1707
                     /locus_tag="VFD73_25160"
     CDS             802..1707
                     /locus_tag="VFD73_25160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HZI77268.1"
                     /translation="MSLRPVREIIQATPTIEGAGVKLQRAFGFGKTKEFDPFLLLDDF
                     RNNNPGDYLAGFPWHPHRGIETITYVLAGSVEHGDSLGNRGKMTAGDVQWMTAGSGIL
                     HQEMPKGDSHGRMHGFQLWANLPSSLKMTNPRYQDIPASAIPEVTDDDGTSVRVISGE
                     FWGRRGPVEGVAADPRYVDVSVPPGKRKVLKVETTSNAFAYVFAGSGTFRDASDPQGV
                     LTESGADPNAPAQYDASNHSLVLFDRGDEVVVRAGDEGIRFLLVAGKPIEEPVAWYGP
                     IVMNTRDQLQQAISELQDGTFIKSR"
     gene            complement(1694..>1992)
                     /locus_tag="VFD73_25165"
     CDS             complement(1694..>1992)
                     /locus_tag="VFD73_25165"
                     /inference="COORDINATES: protein motif:HMM:NF019238.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI77269.1"
                     /translation="IRPLIRSFGLKPVLRRGRFIPGSKSPKIFRPGPVPAPPSELLQR
                     LEAAAASFEADAAALKSETLDHPFFGRLSLSDFVRLQEIHTRHHRGQLSPASDS"
BASE COUNT          395 a          580 c          664 g          353 t
ORIGIN      
        1 atcacgccga gggcacgcga catgacccgc gagtccagcc cgagctgctg atcgtacggc
       61 gacatcctgc gatgcacttg cggtgcggtg agctccagca tccagcgaat gtcagccgag
      121 ctgacgaaat gccacgtagg acgaagcaga tgagtccgga gaatacgacc tcggtggatg
      181 gcccgttcga ctgcggcatc ggtaacacca ccgcgcgcac ggaggccgag cccccacttg
      241 gcgggtccgt attcctgagc ttgcaccgcc ccgaaccagg ccacgatttt ctcgggactg
      301 ggcggagcgg ggcggatgat gcgttggttg gcgagccttc ggtccgctat ggagacagtg
      361 gttgtggctg ccttggctcg cttggaatgc actaaaacgt cccgatcaac gccgggaaga
      421 gcggtggcag ttcggcgatt cgctgccaac cggtgccctc ggccactgcc tcgaccgcca
      481 gcgcctcgaa gtagcgatcc agtaccgcgg ctcgctcctg cgccagcggt ggacggcagt
      541 agtcctcctc ctcccacaca gcggtcccat cgggcagcag tcgagcgctc tcgagcgaac
      601 tgctgagtgc ctggccgaat ggctggaggt cgcggaaagc atgttgttgc agcttggatt
      661 caagatcgtc caggaggctg gagaccggac gggcagagac gaggtagtga gccatggcgg
      721 gcagggaacc ctcaattgtt aagtgagaaa ccagacgtat ggttgaacgc tatcgattga
      781 acactagccc gagaggaatc gatgtcgctt cgcccagtca gagagattat ccaggccacc
      841 cccaccattg aaggcgccgg ggtgaagctt cagcgtgcct ttggtttcgg caagaccaaa
      901 gagttcgatc cttttcttct tctggacgat ttccgcaaca acaaccccgg cgattacctg
      961 gccggattcc catggcaccc gcaccgcggc atcgaaacga tcacctacgt gctcgccggt
     1021 tcggtggagc acggcgacag cctgggaaat cgaggcaaga tgactgccgg cgacgtgcag
     1081 tggatgactg ccgggagcgg catcctgcat caggagatgc ccaagggaga cagtcacggt
     1141 cgaatgcacg gcttccagct ctgggccaac ctgccctcgt cgttgaagat gacgaatccg
     1201 cgctatcagg acatcccggc gagcgcgatt ccggaggtga ccgacgatga tggcacgagc
     1261 gtccgcgtga tctcgggtga gttttggggc aggcgaggac ccgtggaagg ggtcgcggcc
     1321 gatccccgct acgtggacgt ttcggttcca ccgggtaaac ggaaggtgct caaggtggaa
     1381 acgaccagca atgcctttgc atacgtgttc gccggttccg ggaccttccg cgatgcatcg
     1441 gatccccagg gcgtattgac cgaatcgggc gccgacccga acgcgcccgc gcaatacgac
     1501 gcgagcaacc attcgctggt gctgttcgat cggggagatg aagtcgtggt ccgagcggga
     1561 gacgaaggga tccgtttcct cctggtggcg ggtaagccga tcgaggagcc ggtggcgtgg
     1621 tacggtccca ttgtgatgaa cacccgagat cagttgcagc aggcgataag tgagctgcag
     1681 gacggcacgt tcatcaagag tcgctagccg gcgatagctg gccgcggtga tgacgggtgt
     1741 ggatttcctg caggcgcacg aagtcgctca agctcaagcg gccgaagaac gggtggtcga
     1801 gcgtttccga cttcagagcg gctgcatcgg cttcgaagct tgctgcggcc gcttccagac
     1861 gttgcagcaa ctcgctgggt ggagctggca ccgggccggg ccggaagatt ttgggcgact
     1921 tgcttccggg aatgaaccgg ccgcgccgga gaaccggctt gagaccgaac gagcgaatca
     1981 gtggccggat cc
//
LOCUS       DASRPQ010002226         5701 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3428597, whole genome shotgun sequence.
ACCESSION   DASRPQ010002226 DASRPQ010000000
VERSION     DASRPQ010002226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5701
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3428597"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1382
                     /locus_tag="VFD73_25170"
     CDS             <1..1382
                     /locus_tag="VFD73_25170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77270.1"
                     /translation="GVHTTTTSLTPWTSPASGPAATPSDSFETTTSPGGGACPTEASQ
                     QPNNPSFTAGVRSPLAGAYSPFVLRLSREDGSQEIKGLNVTLPVGMAAKFAGVAECPD
                     GAIASTEQKTGRQEQASHSCPASSHLGTVTVGAGAGPSPYYVKGDAYLAGPYQGAPLS
                     LAIITPAVAGPFDLGDVVVRAPLLIDPETAQGTVKSSFPTILQGIPLDVRSIAVEIDR
                     KDFTLNPTSCQAKEVSAQAISLQGQSATLRNRFQVGGCERLGFKPKLSLKLKGGTKRG
                     GHPSLHATVTYPKGGAYSNIAYAQVALPPSEFLDQSHIGTVCTRVQFAAHACPAKAVY
                     GYARAITPLFDKPLEGPVYLRSSSHVLPDLVADLNGQVEIALDGRNDSFHGGLRNTFE
                     AVPDAPVSKFTLTLFGAKKGLLENSTDICRGTHRANARFRAQNGKTITFRPPLEARCE
                     RGRKDSHKR"
     gene            1348..2532
                     /locus_tag="VFD73_25175"
     CDS             1348..2532
                     /locus_tag="VFD73_25175"
                     /inference="COORDINATES: protein motif:HMM:NF037653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI77271.1"
                     /translation="MRGEGRIPTSARQGVTALCERLRSRRGEIEAAVLTRVYAVSDPA
                     QVSDPLYREGLRASVSAAVELSLAGIEASERNPPEIPPVLLVQARLAARSGVGLDTVL
                     RRYCAGHTVLTDLLLEESEGLSDADAVEPKRLLRSQTALLERLLATVSEEHRREGESR
                     ASGAQRHRLEVARRLLEGEPLDPSELAYGLEGTHVALLIHGKAPSDALPGIARELDRR
                     LLGLEPEEGIIWAWLGGRAPLDPERVRDLLGKRLPGERSCAVGESGEGPSGWRRSHRQ
                     AAAALAIALRGKERVVRYADVALLASVAQDELACESLEEMYLAPLRRQRDAGREARRT
                     LRAYFAAKGNVTAAAAQLGVSRNTVRKRVRAIEAGLARPLLSRAAEYEMALKLEELQI
                     GV"
     gene            2664..>5701
                     /locus_tag="VFD73_25180"
     CDS             2664..>5701
                     /locus_tag="VFD73_25180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77272.1"
                     /translation="MGIRSTITTRSHIRLSLAALYVASLAFFVAGLAGATASWASTWS
                     LQSTLDPEALPPESQLNAVSCPTTTSCAAFGYDYSREKELFRLWNGSEWKVGSSEAPN
                     VIPVDTSCATTINCMVVGMTPTEVVSAEVWSAPAEGKPWASVSLTVPKPTGSLETRLS
                     SVSCTSASACTAAGYYIEKTGRYMTLAERWNGSSWSIQTTANPASGNTELLGVSCTSA
                     SACTAVGSQASGTFVERWNGSTWSIQSSPNPEGTSITLSDVSCPTSSFCLATGSYGST
                     KKTLVERWNGSTWTLVSSSSPSETGGSNLTDVSCSSAEFCAAAGYYNPGGSERRTLVE
                     HWNGSAVSLQSSPNPEGKTFVQLNDVSCTTSSACTGVGYSRTTLPASGTLGERWNGST
                     WSIQSTADPEPLPPESRLNAVSCPTGTSCAAFGYDYSREKELFRLWNGSEWQVGSSST
                     PAVLPADTSCATTINCMVVGAASSESVRAETWSAPGEGKTWSHTTLGVPLPSGSSHVA
                     FNSVSCTSTTACTAAGSYTDKTGRTVTLAERWNGSEWTIQTTANPASGNTELLGVSCT
                     SASACTAVGQQASGTFAERWNGSTWSISSTPNPTGTSIKLSDVSCPMSIFCLAVGSYS
                     TSPTKTLVERWNGSAWTVVSSPNPSGGGSAYLTDVSCPAAESCTAAGYYATTLGGSEN
                     RTLVEGSNGTTAWLEGSVNPEGKALARLSDSSCGTPSACTGVGFSQATTAGPASGTLG
                     EAFYEVDHTPPVIALFEGPLGVINYSNPTFSFESNEARSTFECSLDNASYTPCSSPKS
                     YEKLSDGSHTFVVRATDVSGNLGKDGAWERSFQVDTAAPQTTISSPTPSYTAHEEWPI
                     TFSSSEAESTFECRLDLAKYFTPCSSPYTLPKGLSEGWHTFEVRATDKAKNTDATPAT
                     WHFNQAIYPSTAKDNTLTSPSEGAKSASHFTLGAKWNWGYKIDSIAYQLKLPSWDAFK
                     YIPTKYLQDEAGNHPGAQIPVEGSLGKSPAIVFDLKAYAEA"
BASE COUNT         1077 a         2035 c         1701 g          888 t
ORIGIN      
        1 gcggggttca caccacgacg acctcactaa ctccgtggac ctctccggca tccggtcccg
       61 ccgccactcc ctcggactcc tttgagacga ccacgtcgcc tggcggaggc gcctgtccga
      121 cggaggcctc ccagcagccc aacaatccga gcttcaccgc cggcgtgcgc agcccgctgg
      181 ccggagccta ctcccccttt gtcctgaggc tctcccgcga ggacggctcc caagagatca
      241 agggcctgaa cgtaaccctt cccgtcggca tggctgccaa gttcgcgggg gtggctgagt
      301 gcccagatgg ggcgatcgcc tccaccgagc agaagacagg aaggcaggag caggcctccc
      361 actcctgtcc cgcctcctct cacctaggca cggtcaccgt cggagccgga gcgggaccct
      421 ctccctacta cgtcaaggga gacgcctacc tggcgggccc ctatcaggga gcgccgctct
      481 cattggcgat catcaccccg gcggtggccg gtcccttcga cctcggcgac gtggtggtca
      541 gggcgccgct cctcatcgac cccgaaaccg cccagggcac ggtgaagtcg agcttcccga
      601 cgatcctgca gggcatcccc ctcgacgtca ggtcgatcgc tgtcgagatc gaccgcaagg
      661 acttcaccct caacccgacc tcctgccagg caaaggaagt gagcgcgcag gcgatctcac
      721 tccagggcca aagcgcgact ctcagaaacc gcttccaggt cggtggctgc gagaggcttg
      781 gcttcaagcc gaagctctcg ctgaagctga agggaggcac caagcgaggt ggccatcctt
      841 ccctgcacgc caccgtgacc taccccaaag gcggcgccta ctccaacatt gcctacgccc
      901 aggtcgcgct tcccccttcg gagttcctcg accagtccca catcggcacc gtctgcaccc
      961 gggtccagtt cgccgcccac gcctgcccgg ccaaagccgt ctacggctac gcgagggcga
     1021 tcacgccgct atttgacaag cccctggaag ggccggtcta cctcagatcc tcgagccatg
     1081 tcctcccaga tctcgtcgct gacctgaacg gacaggtcga gatcgccctc gacggcagaa
     1141 acgactcctt ccacggcggc ctcagaaaca ccttcgaagc cgtccccgac gcccccgtct
     1201 ccaagttcac cctgaccctc ttcggcgcca agaagggcct gctcgaaaac tcgaccgaca
     1261 tctgccgcgg cacccacagg gcaaacgcgc gcttccgcgc ccaaaacggc aagacgatca
     1321 cctttcggcc cccgcttgag gcgcgatgtg agaggggaag gaaggattcc cacaagcgct
     1381 aggcagggcg tcaccgcgct ttgcgagcgc cttcgctccc gccggggcga gatcgaggcc
     1441 gcagtcctca cccgggtcta cgcggtatct gaccctgccc aggtctccga tcccctctac
     1501 cgcgaggggc tgagggcctc ggtatcggcg gcagtggagc tctcgctggc gggaatcgag
     1561 gcctctgagc gaaacccgcc ggagattccc ccggtgctct tggtccaggc gcggctcgcg
     1621 gcaagaagcg gcgtcggact tgacaccgtg cttcgccgct actgtgctgg gcacaccgtc
     1681 ctcaccgatc tcttgctcga ggagtcagaa gggctgagcg acgccgacgc ggtggagccc
     1741 aagcggctgc tgcgctccca gaccgcgctc ctggagcgcc tcttggccac agtcagcgag
     1801 gagcatcgcc gcgaggggga aagccgcgcc tcaggcgccc agcgccaccg cctggaagtg
     1861 gcaaggcgcc tgctcgaggg cgagcccctg gatccctccg agctcgccta tgggctggag
     1921 ggaacccacg tcgccttgct gatccacggc aaggcgccaa gcgatgccct gccggggatc
     1981 gcgcgcgagc tcgaccgaag gctcctgggg ctggagcccg aggagggaat catctgggcg
     2041 tggcttggag ggcgggctcc acttgacccc gagcgggtca gggacctgct gggcaagcgc
     2101 ctccccggcg agcgcagctg cgcggtgggg gagagcggcg agggcccctc gggatggagg
     2161 cgctctcacc gccaggccgc cgccgcgctg gcgatcgccc tgcgcggcaa agagcgcgtc
     2221 gtccgctacg cggatgtggc cctgctcgcc tcggtggccc aagacgagct ggcctgcgag
     2281 tcgctcgagg agatgtatct ggcgccattg aggcgccagc gagacgcggg ccgggaggca
     2341 aggcgcaccc tgcgcgccta cttcgccgcc aagggcaacg tgaccgcggc cgccgcccag
     2401 ctcggggtca gccgcaacac cgtccgcaaa cgcgtgcggg cgatcgaggc aggcctcgcc
     2461 cgcccgctgc tctcccgcgc ggcggagtat gagatggcgc tgaagctcga ggagctgcag
     2521 atcggcgtgt agcgatgcgt tgactcattg ctcataactc attgcctgat tgaccgtttt
     2581 ggccaccttc gggagccggc ggccctgcga gcgtagcccc cagcttcatt tcttcagcag
     2641 ggatatcggc aggggaggtc gagatgggaa tccgatcaac aatcacaacg cgctcgcata
     2701 tccgcctgag cttggcggcg ctttacgttg cgagcttggc atttttcgtt gccggcttgg
     2761 ccggcgcaac cgcgtcttgg gccagcactt ggtcacttca gtccaccctc gatccggaag
     2821 ccctgccccc cgaatcgcag ctgaacgcgg tctcctgtcc gacgacgacc tcctgcgctg
     2881 ccttcggcta tgactacagc cgcgaaaagg agctgtttcg cctctggaac ggctccgaat
     2941 ggaaagtcgg cagcagcgaa gcgccgaacg tcattccagt cgacacctcc tgcgcgacga
     3001 cgatcaactg catggtggtg ggcatgacac cgaccgaagt cgtgagcgct gaagtctggt
     3061 ctgcgccggc cgaaggcaaa ccgtgggcat cggtgagctt gaccgttccg aaaccgaccg
     3121 gttctctcga aaccaggctg agctcggtct cctgcacgtc ggcttcggcc tgcacggcgg
     3181 ccggctacta catcgaaaaa actggccggt acatgacgct tgccgagcgc tggaacggca
     3241 gcagctggtc gatccagact acagccaacc ccgccagcgg caacaccgaa ctgctcggcg
     3301 tctcctgcac ctcggcgagc gcctgcacgg ccgtaggcag ccaggccagc ggcacattcg
     3361 tcgagcgctg gaacggcagc acctggtcga ttcagtcgag ccccaacccc gaaggcacct
     3421 cgatcacgct ctccgacgtc tcctgtccga cctcgagctt ctgcctcgcc accggcagct
     3481 acggctcgac gaagaaaacc ctggtcgagc gctggaacgg cagcacctgg accttggtct
     3541 caagctccag cccgagcgaa accggcggct ccaacctcac cgacgtctcc tgctcttcag
     3601 cagaattctg cgctgcggcc ggttattaca acccgggtgg aagcgaacgg aggaccttgg
     3661 tcgagcattg gaacggcagc gctgtatcgc tgcagagctc acccaatccc gaaggcaaga
     3721 cgttcgtcca gctgaacgat gtgtcctgta cgacgtcgag cgcctgcacg ggcgtggggt
     3781 actcccggac gacgttgccc gcgtcgggca cgctgggaga gcgctggaac ggcagcacct
     3841 ggtcgatcca atccaccgcc gaccccgaac cgttgccccc agaatcgcgc ctgaacgccg
     3901 tctcctgccc caccggcacc tcctgcgctg ccttcggcta tgactacagc cgcgaaaagg
     3961 agctgtttcg cctctggaac ggctctgaat ggcaggttgg cagcagcagc accccggccg
     4021 tcctcccagc cgacacctcc tgcgcgacga cgatcaattg catggtggtg ggcgccgcct
     4081 catccgaatc cgtgagagcc gaaacctggt ctgctcccgg tgaaggcaaa acgtggagcc
     4141 acacgacttt gggagttcca ttgccgagcg gctccagcca cgttgccttc aactcggtct
     4201 catgcacctc gaccacggcc tgcaccgccg ccggtagcta caccgacaaa accggccgga
     4261 ccgtgaccct tgccgagcgt tggaacggca gcgaatggac gatccagacg acggccaacc
     4321 ccgcgagcgg caacaccgaa ctgctcggcg tctcctgtac ctcggcgagc gcctgcacgg
     4381 ccgtcggcca gcaggcgagc ggcaccttcg ccgagcgctg gaacggcagc acctggtcga
     4441 tctcctcgac cccgaacccg acgggaacgt cgatcaagct atctgacgtc tcctgcccga
     4501 tgtcgatctt ctgcctcgcc gtcggcagct actcgaccag cccgacgaaa accctggtcg
     4561 agcgctggaa cggcagcgcc tggaccgtgg tctcaagtcc caacccgagc ggaggcggct
     4621 ccgcctacct caccgacgtc tcctgcccgg cggcggaatc ctgcaccgcg gccggttact
     4681 atgcgacaac cctgggcgga agcgaaaacc gcaccctggt cgagggctcg aacggcacaa
     4741 ccgcatggct ggaaggctca gtcaatcccg aaggcaaggc gctcgcccgg ctgagcgatt
     4801 cctcctgtgg aaccccgagc gcctgcactg gcgtgggatt ctcccaggcg acgaccgcgg
     4861 gaccggcgtc gggcacgctg ggggaggcct tctatgaagt tgaccacacg cccccggtga
     4921 tcgcgctctt cgaagggccg ttgggcgtga tcaactactc gaacccgacc ttctccttcg
     4981 agtccaacga ggcccgctcg acctttgaat gctccctgga caacgcgagc tacacgccat
     5041 gctcgtcccc caagagctac gaaaaactct ccgacggctc ccacaccttc gtggtccggg
     5101 caacggacgt gtcgggaaac ctcgggaaag acggagcatg ggaaagatcc ttccaagtcg
     5161 acacggccgc tccgcaaacc acgatcagct cgccgacccc cagctacacc gcccacgaag
     5221 aatggccgat caccttctcc tccagtgagg ccgaatcaac attcgaatgc cgtctcgacc
     5281 tcgccaaata cttcacacca tgcagctcgc cctacacact tccaaaagga ttgagcgaag
     5341 gctggcacac cttcgaagta agggcgaccg acaaagcgaa aaacaccgac gcgactcctg
     5401 ccacatggca tttcaaccag gcgatctatc catcgactgc gaaagacaac acgttgacct
     5461 cgcccagcga aggcgccaag agtgcgagcc atttcacgct cggcgcaaaa tggaactggg
     5521 gatacaaaat cgactccatc gcctaccagc tgaagctgcc cagctgggac gccttcaaat
     5581 acatcccgac caaatacctc caagacgaag ccggcaacca cccaggcgcc cagatccccg
     5641 tcgaagggag cctcggcaag tccccggcga tcgtctttga cctcaaagcc tatgccgaag
     5701 c
//
LOCUS       DASRPQ010002227         1054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4020447, whole genome shotgun sequence.
ACCESSION   DASRPQ010002227 DASRPQ010000000
VERSION     DASRPQ010002227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4020447"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..259)
                     /locus_tag="VFD73_25185"
     CDS             complement(<1..259)
                     /locus_tag="VFD73_25185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77273.1"
                     /translation="MPLPIPAEKNTVSGLAVSPDGSKFAVSFLGSSNLEIGSKIAVFS
                     LATRAGREWAWPGKGTIGPITIRVGGTGALSWEANNRTLLFK"
     gene            complement(445..933)
                     /locus_tag="VFD73_25190"
     CDS             complement(445..933)
                     /locus_tag="VFD73_25190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77274.1"
                     /translation="MGYTITAWLSFGEALAAVAGALTGLLFVALSVRSDAVRASRSLS
                     SRAAQTLVLFMTSVLAAVLLVAPQPSAALGSELLALAIASGTILLILDRRAGHSAEKG
                     PLRYIERFSPNMITAAFVGVAGITFLVKAGGGLYWLIPAAMASLLGGVVNAWLFLVKV
                     TE"
BASE COUNT          206 a          343 c          348 g          157 t
ORIGIN      
        1 ccttgaacag cagcgtccgg ttatttgcct cccacgacaa tgcgccggtg ccgccgactc
       61 tgatggtgat cggcccgatg gtccctttac cgggccaggc ccactctcgc ccggccctgg
      121 ttgcgagcga gaagaccgca atcttggatc cgatctccag gttgctggag ccgaggaagg
      181 agacggcgaa cttgctgcca tcgggggata ccgccaggcc agagaccgtg ttcttttccg
      241 ccggtatggg caggggcacc aggggacctg gatgacccga ccggctcagg accagcttgt
      301 agaacttgat cggcccccag tcgaaggcgg aagtgcccgc cttgggcggg accctgcggc
      361 gaagacgaac gtacggtcgt cggcagcggg ccgctcacca gccaaagcga gcggggcccc
      421 cggcattccg ggatggagac agcgctactc ggttaccttg acgaggaaca gccacgcgtt
      481 gacgaccccg ccaagcaggc tcgccatggc ggcggggatc agccaataca agccacctcc
      541 ggccttcacc aggaaggtga tgccggcaac gccaacgaac gcggcggtga tcatgttggg
      601 cgagaacctt tcgatgtacc ggagcgggcc cttttcagcg ctgtgacctg ctcgccggtc
      661 cagaatgagc aggatcgtgc ccgaggcgat ggccagagcc agcaactcag agccaagggc
      721 tgccgatggc tggggagcga ccagcaggac cgcggcgagc accgaggtca tgaacagcac
      781 aagggtttgc gccgcgcggg aactgaggct gcgcgatgcg cgcaccgcgt cgcttctgac
      841 ggagagcgcc acgaacagca ggccggtcag cgcaccggca acggcagcga gcgcctcacc
      901 gaagctcagc cacgctgtga tcgtgtatcc caccggccac ctcccaggtc ctgggctgca
      961 cagatgagcc gattcaacca gggggcttgt gggatgcccg tctcaaggaa ccttagcgac
     1021 gatctccacc aggtttccgt ccggatcacg cagc
//
LOCUS       DASRPQ010002228         1125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1192363, whole genome shotgun sequence.
ACCESSION   DASRPQ010002228 DASRPQ010000000
VERSION     DASRPQ010002228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1192363"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..607
                     /locus_tag="VFD73_25195"
     CDS             <1..607
                     /locus_tag="VFD73_25195"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HZI77275.1"
                     /translation="GLPNILVLHPSVPAKSVKELIALARAKPGMLNYGSASAGGSVHL
                     AAELFKHMAGVNIVRISYKSSGASVISLVSGEVHLMFANAPPVVPHVKAGKLRALAVT
                     TLQPSVLFPEVPTIAASGLPGFEVASIYALFAPAKTPAAIVARLNQEAVRFLARADVK
                     EKFLATGAETTGGTPEDLAAVMQSEIARMGKVIKAAGIREE"
     gene            712..>1125
                     /locus_tag="VFD73_25200"
     CDS             712..>1125
                     /locus_tag="VFD73_25200"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HZI77276.1"
                     /translation="MPFARISDDLEMHYEVDNFTDPWKKPETIVLHHGNCKSTLFWYR
                     WVPILARHYNVVRLDARGLGRSTVPPPGYKWSLQGFANDLGSLLDHLELDKVHLVGET
                     VGGTISMLFASEHPERVRSLTVCSSPFRFTDPHYRD"
BASE COUNT          221 a          351 c          356 g          197 t
ORIGIN      
        1 gggcttgccc aatatcctgg tgctgcatcc atctgtgccg gcaaagtccg tcaaggagct
       61 gatcgcactg gcccgggcaa aaccgggaat gctcaattac ggctcggctt ccgcaggcgg
      121 ctcggtgcat ctggcggcgg agttgttcaa gcacatggcg ggcgtcaata tcgtgcgtat
      181 cagctacaag agcagcggtg catccgtcat ctccctggtc agcggcgagg tgcacctgat
      241 gttcgccaac gcgccgcccg tggtgccgca cgtgaaggca ggcaagctga gagccctggc
      301 ggtgaccacg ctgcaaccga gcgtgctgtt tcccgaggtg ccgacgatcg ccgcctccgg
      361 gctcccggga ttcgaagtgg cgtccatcta cgccttgttc gcgccggcca aaacgccggc
      421 ggccatcgtc gcgcgactga accaggaggc cgtgcgcttc ctggccaggg cggatgtgaa
      481 ggagaagttt ctcgctaccg gggccgagac gacgggcggc acgccggaag accttgcagc
      541 cgtgatgcaa tccgaaatcg cgcggatggg caaagtcatc aaggcagcgg gaatacgcga
      601 ggaatgaccg cgtgacaagt gataggtgat aagtgatagg actcccgcgc agcgggcgct
      661 cttgaactcc catcacccat cacccatcac gcatcactaa gggagcaagg catgccattc
      721 gccaggattt ccgatgacct cgagatgcac tacgaggtcg ataatttcac cgacccctgg
      781 aagaagcccg agacgatcgt gcttcaccac ggcaactgca agagcaccct gttctggtac
      841 cgatgggtgc cgatcctggc gcgtcactac aacgtggtgc ggctggatgc gcgggggctg
      901 gggcgatcga cggtaccccc acccggctac aagtggtcgc tgcaggggtt cgcgaatgac
      961 ctcgggagcc tgctggacca cctcgaactg gacaaggtgc acctggtggg agaaacggtc
     1021 ggcggcacca tctccatgct gttcgcttcc gaacatccag agcgggtccg cagtcttacc
     1081 gtctgcagct cgcctttccg cttcacggac ccccactacc gggat
//
LOCUS       DASRPQ010002229         3063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3729918, whole genome shotgun sequence.
ACCESSION   DASRPQ010002229 DASRPQ010000000
VERSION     DASRPQ010002229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3063
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3729918"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1017)
                     /locus_tag="VFD73_25205"
     CDS             complement(<1..1017)
                     /locus_tag="VFD73_25205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77277.1"
                     /translation="MTIALRGQGTPQSGAAWVAVASGASVAALGGLVVAGWLTVAVAL
                     IQVLPGFPPMQYNTALGFMIAGAALLAAVLDLRRPTLLLGGLSIAISVATLSEYLFHA
                     DFGIDNLLVEGYVLNGVSDPGRMAPNSALALALIGAALVGLSFRSVTRFRDVYPAMLG
                     SIVIALGTAALVGYAAGVPGAYGWGHFNRMSVHTALGFILLGGGTVGLAWNAARTASA
                     ELPAWLPWIAGVAVGTVTLSMWYALAAEPRSLSGGSLPSGIRPVADPALPNVMLVAGL
                     LSALLLGWSLRLQQTSRLRARRLAESNVALTQQSRAREQAEERLHQLAAIVESSNDAI
                     IATTL"
     gene            complement(1014..2417)
                     /locus_tag="VFD73_25210"
     CDS             complement(1014..2417)
                     /locus_tag="VFD73_25210"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI77278.1"
                     /translation="MQSLIAWYSAFVLIFFFGINSYYLVLTIAGFWRTLRVINEVRRP
                     DQRRLLRSPLTPPVSVLAPAFNEEANVVDNVRSLLMLDYPLFEVILVNDGSQDRTLGR
                     LVDAFDLRRSARSYEQSLRCKPIHGVYESASYPNLVVVDKANGGKADALNAGLNLSLY
                     PVFCAIDADSVLEPDALLRLVRPFVDAPGVTIAAGGVVRVANGCDIHGGRVHAVRLPR
                     KLLPLIQIVEYLRAFLFGRMGWSTGNSLLVISGAFGLFDKKAAVLAGGYATDSVGEDM
                     ELVVRMHRYRRERRQPYRIGFVPDPICWTEAPESLRVLRRQRTRWQRGLIDTLMRHRC
                     MMGRPRYGTVGMVSLPGFLVFEMISPLVELSGYLLLPLLWASGLLSMPLAGTFFVLAI
                     MYMVLVSALAILLEDLAFRRYHSVFDLGRLLLAAVLENFGFRQLTVWWRVRAFAEYFR
                     GDLSWGAMERRGMATTT"
     gene            complement(2429..>3063)
                     /locus_tag="VFD73_25215"
     CDS             complement(2429..>3063)
                     /locus_tag="VFD73_25215"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HZI77279.1"
                     /translation="KDRDVRVRQAAVWAIGQIGTPDGLQSLVRLLGDRTLIVAHRVQE
                     VLAEHGQAVGDTILAYAEKTSSRAGRLAAIELIGWLRLTAGAELLLEFTKHVDAEIRV
                     KSVKAAAAIGDPRFLAAFHARLEDTSWPVRCQAAKGLSVFGSPDSVPLLSKALRDPQW
                     WVRFYAATALAEVGPAGEQALSDGLQNGDNRVREMARYLLERGDLVPALP"
BASE COUNT          658 a          993 c          944 g          468 t
ORIGIN      
        1 caacgtggtc gcgatgatgg catcgtttga gctctcgacg attgcggcga gctggtgcag
       61 acgctcctca gcttgctccc tggcacggct ctgctgagtc aacgccacgt tggactcggc
      121 caaacgacga gcgcgcaggc gggaggtctg ctgcaaccga agggaccagc ccagcagcag
      181 tgcactcaga aggcctgcaa cgagcatgac gttggggagc gctgggtcag ccaccgggcg
      241 tatgccgctt ggcagactcc caccggatag ggatctcggc tcggcggcga gagcgtacca
      301 catggacagg gttacggtcc cgaccgccac cccggcaatc caaggaagcc acgccggcag
      361 ctccgcggac gcagttcgag ccgcattcca ggccaggcct actgttcctc ctcccagcag
      421 aatgaagccc agcgccgtgt ggaccgacat gcgattgaag tggccccatc catacgctcc
      481 gggcactccc gccgcatacc ccaccagtgc ggcagtgccg agtgcgatga cgatggaccc
      541 cagcattgcc ggatagacat cacgaaagcg ggtgaccgac cggaaggaga gcccgaccaa
      601 tgccgcgccg atcagtgcca aagccagcgc gctgttcggg gccatacgcc cgggatccga
      661 gacgccgttc aagacatacc cttcgaccag caggttgtcg atgccgaaat cggcgtggaa
      721 gagatattca gagagagtcg caacgctgat ggcgatggag agcccgccga gaagcagggt
      781 gggtcttcgg aggtcgagca ccgcagccag cagtgcggcc ccggcaatca tgaacccgag
      841 cgccgtgttg tactgcatgg gcggaaagcc gggaagcacc tggatcagag ccacggcaac
      901 ggtgagccaa ccggccacaa ccaacccgcc cagagccgcc acgctggctc cggaggcgac
      961 cgcgacccac gccgctccac tctgaggagt gccctggcct cgaagggcga tggtcatgtc
     1021 gttgtcgcca taccgcgacg ttccatggca ccccaggaga gatcgccccg gaagtactcg
     1081 gcaaaggcgc gaacccgcca ccagaccgtg agctgcctga acccgaagtt ctccagcacg
     1141 gccgccagga gcagtcgccc gagatcaaac acgctgtggt agcgtcgaaa ggcgagatcc
     1201 tcgagtaaga tggccagcgc cgagaccagc accatgtaca tgattgcgag aacgaaaaag
     1261 gttccggcca acggcatact cagcagtcca gaggcccaga gcagcggcag gagcaggtac
     1321 ccagaaagct ccaccaacgg gctgatcatc tcgaaaacga ggaagccggg cagggagacc
     1381 attccgaccg tcccatagcg cggccgcccc atcatgcagc gatggcgcat gagagtgtca
     1441 atgagcccgc gctgccatcg cgtccgctgt cggcgcagca ctcggaggct ttccggagct
     1501 tcggtccagc agatcggatc gggaacgaag ccgatccgat acggttgccg gcgttcacgg
     1561 cggtatcggt gcatccggac caccagctcc atgtcctcgc ccacagagtc ggtggcatat
     1621 ccgccggcca gcactgcagc cttcttgtcg aacaggccga aggcacccga gatcaccagt
     1681 aggctgttgc cggtgctcca tcccattcgg ccgaacagaa aggcccggag gtattcgacg
     1741 atctgaatca gcggcagcag cttgcgggga agccgcacgg cgtggacccg gcctccatgg
     1801 atatcgcagc cgttggccac tcggacgaca cctcccgcgg cgatggttac accgggagcg
     1861 tcgacgaacg gccgaaccag tcgcagcagc gcgtccggtt ccaggacgga gtcggcatcg
     1921 atcgcgcaaa agacagggta caggctcaga ttcagcccgg cattcagcgc gtcggccttg
     1981 cctccattcg ccttgtcaac gacgacgaga ttggggtagc tggcagattc gtaaactcca
     2041 tgaatcggtt tgcagcggag actctgctcg tagctccgag cgctgcgccg gaggtcaaac
     2101 gcatctacca gccggcccag agtccggtcc tgcgatccat cgttgaccag aatgacttca
     2161 aacagcggat aatcgagcat caggagtgac cgcacattat ccaccacgtt ggcttcttcg
     2221 ttgaaggccg gggcgaggac ggatacaggt ggggtcagcg gagaacggag caagcgacgc
     2281 tggtcgggac gtcgcacctc attgatgacg cggagcgtgc gccagaatcc cgcaatagtg
     2341 agcacgagat agtaactgtt gatcccaaag aagaagatca gcacgaatgc cgagtaccag
     2401 gcaatcaggc tctgcaccgt ggggccgatc acgggagtgc gggaaccaga tcgccccgct
     2461 cgagcaggta ccgcgccatc tcgcgcacac ggttgtcgcc attctggaga ccatcggata
     2521 atgcctgttc gcccgctgga ccaacttccg ccaatgcggt cgccgcgtag aaccgaaccc
     2581 accactgagg atcccgaagt gccttgctca agagcggcac ggaatcggga ctgccaaaca
     2641 cgctcagccc ctttgcagcc tggcatctca cgggccagct ggtgtcctcc agtcgcgcat
     2701 ggaaggcggc caagaacctg ggatcgccaa tcgccgcggc agccttgacg ctcttcaccc
     2761 gaatttccgc atccacgtgt ttggtgaact cgagcaagag ctcggcaccg gctgtcaggc
     2821 ggagccagcc gatcagctcg atggccgcca ggcggccggc tcgactcgag gtcttctcgg
     2881 cataggcgag aatagtgtca cccaccgcct gaccgtgttc ggcaagcacc tcctggaccc
     2941 gatgcgccac gatcaaggtc cggtctccca gcaatcgcac caggctttgg agtccgtcag
     3001 gagtaccgat ctggccaatc gcccacactg cggcctggcg gactcgaaca tcacggtctt
     3061 tca
//
LOCUS       DASRPQ010002230         1022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4325219, whole genome shotgun sequence.
ACCESSION   DASRPQ010002230 DASRPQ010000000
VERSION     DASRPQ010002230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4325219"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..248)
                     /locus_tag="VFD73_25220"
     CDS             complement(<1..248)
                     /locus_tag="VFD73_25220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77280.1"
                     /translation="MNYRSKTKVAGVALAVAGITALAACSSGGSSSSGGSNNNSSSVV
                     KVPGGIGSIPVAPAGETKKAGTITWAMAPGATPNWIFPV"
BASE COUNT          177 a          355 c          288 g          202 t
ORIGIN      
        1 accgggaaga tccagttcgg ggtggcgccg ggcgccatcg cccaggtgat ggtccccgcc
       61 ttcttcgtct cgccggcggg cgccaccggg atcgacccga tgccgccggg caccttgacc
      121 acgctggagc tgttgttgtt gctcccgccg ctactgctgc tgccaccgct gctgcaggcg
      181 gcaagcgcgg tgatgcccgc tactgcgagg gccacgcccg cgaccttggt cttgctgcgg
      241 tagttcatga tcggccctcc ctccgtgcgt tcgcgcttgt gatccgtcct agggtcatca
      301 gcctgtcgcc cttctctcgc tggttgccgg tgattcgctc cgcaccgctg tggggcactg
      361 ggtcgcagta cccccaaccc gattacggcc cgtctccccg gcacacccgt accggctcat
      421 gccgagccgg ccggtgagct accggtgtat gagttagcgg aagcgtaagt tccatactgc
      481 atcgatctct cgccgataat gtcacaagtt gccatcaatc ccctgacgac ggcgacccga
      541 tatgccgcgg ctaacatccg gatatttcgg gatctggcct ctcctgttaa ctttcgcctc
      601 aacgatcacg cgggttcagc ccgcgcgaag gcttgccgtt ggtgagccct ctcgccgcag
      661 gatctccgcc cccaaccaca agtctcgcca agaacgttaa cggaccatct cctcacgcca
      721 ccccggcagc ccttaaggtc ggctccggct cggcgattac tcagcgtaac catctagcag
      781 tttgtaggca aattatcacc ctacgcgctc atgctggccc ggaacgggcc taacgcggtc
      841 gtgcaatcag tcacctgctg aaataccagt cctcccaggc gaatcaatca atacccgcga
      901 ataacaagtt ggccatcaat gcataacaca tcgaatacag ggaccggtgg taccagtgtt
      961 cgcgggcggg cgtcacccga ccacgcgggc ggcagtcact tgaagatgac ggtgcggcgg
     1021 cc
//
LOCUS       DASRPQ010002231         1288 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2165426, whole genome shotgun sequence.
ACCESSION   DASRPQ010002231 DASRPQ010000000
VERSION     DASRPQ010002231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1288
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2165426"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(287..607)
                     /locus_tag="VFD73_25225"
     CDS             complement(287..607)
                     /locus_tag="VFD73_25225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77281.1"
                     /translation="MKLSDEDRMRPDMVAAARGGDASRAMDGEGDPKSASMEQALYWR
                     QIYREILAVEEKVMDRIQDLMVKQSPQVRREVELTNVPVVASQAERFRQRLGFWTARV
                     RELE"
     gene            complement(689..1144)
                     /locus_tag="VFD73_25230"
     CDS             complement(689..1144)
                     /locus_tag="VFD73_25230"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZI77282.1"
                     /translation="MIRFKVGLLERVNRELPKLQPVAQRAAATDLEIINNQMHGYQSR
                     LDLWYHRLWELQGLQLDPEGQLIRHHGREGHLTKREYQLLQFLIDHPHRFFTVNQLLG
                     RAWSDPALFPEEVRNYVRRIRKILADLEIPCELVNRPARGYSLVFHPDE"
BASE COUNT          227 a          431 c          388 g          242 t
ORIGIN      
        1 caaccagggc caagaggccg acaacgaccg cggtccaggc accgctgaga cgggtgcccc
       61 tctcgccggg caaagtctcc ggttcaggcg tgacgtcgcc aggaggcgtg ctgtccatcg
      121 tggctaatga ccgccgatca agcccgcgac cccaacgatc acgagagcgg tcaaggccgc
      181 gacccaaacg gctacggtgg tagcacgcga aagtcgcgat gccattcgtc tgttgcgcgc
      241 tgctcgcagg cgttgctcta gggttgctga cccaaccacg agccggctac tcaagttccc
      301 gcaccctcgc tgtccagaac ccgaggcgct gacggaacct ctccgcttga gaagcgacca
      361 ccggtacgtt agtcagctcg acctctcggc gaacctgagg ggattgcttc accatcaggt
      421 cttggatacg gtccatgacc ttctcctcca cggccaggat ctcccggtag atctgtctcc
      481 agtagagcgc ttgctccatc gatgcactct tgggatcgcc ctcgccgtcc atggcccggc
      541 tcgcgtcgcc tccccgggcg gcggccacca tgtcaggccg catgcggtct tcatccgaaa
      601 gcttcatggc accatttcgc gccggctgcc ataagaaggt cagtaacttt ccctcgattt
      661 cgccgacggc ctttgcagtc gctcggggtc actcgtcagg gtggaaaacg agcgaatagc
      721 cgcgagctgg ccggttcacg agctcgcatg ggatctcgag atcggccagg atcttgcgga
      781 ttcggcgcac gtagttgcgc acctcctccg gaaacagcgc agggtcggac cacgcccggc
      841 cgagcagctg gttgacggtg aagaagcggt gcggatggtc gatcagaaac tgcagcagct
      901 ggtactcccg cttggtcagg tgaccttctc ggccgtgatg tcgaatcaac tgcccttccg
      961 gatccagctg cagaccctga agctcccaga ggcggtggta ccagagatcc agcctgctct
     1021 gatagccgtg catctgattg ttgatgatct cgaggtcggt ggccgccgcc cgctgcgcga
     1081 ccggctgcag cttcggcagc tctcggttca ccctctccag caggccgacc ttgaaccgaa
     1141 tcaagtcggc gtagacgccg atccagtgcc tcgcgtcctc ccaatgcgtc gtccccaggt
     1201 cttcgccgct cagcccgggg ggggggttcg tccaaggccg tgtcggtcac gccgttagaa
     1261 atgccattcg agggccccgg ttgtcaac
//
LOCUS       DASRPQ010002232         1341 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4325450, whole genome shotgun sequence.
ACCESSION   DASRPQ010002232 DASRPQ010000000
VERSION     DASRPQ010002232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1341
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4325450"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(86..976)
                     /locus_tag="VFD73_25235"
     CDS             complement(86..976)
                     /locus_tag="VFD73_25235"
                     /inference="COORDINATES: protein motif:HMM:NF040183.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI77283.1"
                     /translation="MIAPGSPTVRRRRLAAELRGIRESKGKSGDTVAAALKWSPSKIS
                     RYERARTGLRPREVERLLDYYEITGPRRALLLGLAEDAAQKGWWEEFTDSLSEDYKQF
                     IGLEHEATSMAIWHVDVVTGLLQTEDYARHIIGSYSQVERVAPGMIGRLVRVRMRRQQ
                     VLNRDGLQLSVVLDESVLKRRIGDEPVMYDQLMRLVKEADRPNLTLQVLPLDAQHSVF
                     GESFVIFSFGQDADAMLQDVVSTEHLRSGFTLEGERDTYLHRIAFQMLSEAALDPVAS
                     RALILETAESWSGAQKHAHA"
BASE COUNT          234 a          463 c          398 g          246 t
ORIGIN      
        1 tcggcccggg cagccgtccg gcatccagga aataccacta atatgacatt aagcggagca
       61 aacgggaatt aacggctgac gtcattcacg cgtgggcgtg cttctgggca ccggaccagg
      121 actccgcagt ctcgagaata agcgcccggg acgccactgg gtcgagagcg gcttcggaaa
      181 gcatctgaaa tgcgatccgg tgcaggtatg tatcccgctc gccttccaag gtgaatccgc
      241 ttctcagatg ctcggtgctc accacgtctt gcaacatcgc atcggcgtct tgcccgaagc
      301 tgaagatgac aaaggattcc ccgaataccg aatgctgcgc atcgagggga agaacctgca
      361 gcgtcaggtt cggccggtcg gcctctttca cgagcctcat gagctggtca tacatgaccg
      421 gctcgtcgcc gatccggcgc ttgaggaccg attcgtccag caccaccgac aactgcagcc
      481 cgtcccggtt cagcacctgc tggcggcgca tccggacccg gaccagccgc ccgatcatgc
      541 cgggcgcgac ccgctcgacc tggctgtagc tgccgatgat gtgccgcgcg taatcctcgg
      601 tctgcaacag ccccgtgacc acgtctacat gccagatggc catcgacgtg gcctcgtgct
      661 cgagcccgat gaactgctta tagtcctcgg acaggctgtc cgtgaactcc tcccaccagc
      721 ccttctgcgc cgcatcctcg gcgagcccga gcaacagggc gcggcggggc ccggtgatct
      781 cgtagtagtc gagcagccgc tcgacctccc ggggccgcag gccggtcctg gcccgctcgt
      841 acctgctgat cttcgacggt gaccacttca gcgccgcagc gaccgtatcc ccgctcttcc
      901 ccttgctctc cctgatcccg cgcagctcgg cggccagccg gcgccgccgt accgtggggc
      961 ttccaggcgc gatcatcgga cgttcctcct cctcggcgcc gcgcgggcga acgagcgacg
     1021 gtcacgcagg tttcactaca agaattggtg aaacctttag gccaccgtac atatgccatc
     1081 gtaacgattg ccgtgacatt aactagtccg gatgaaccag acaatccggt ggcggcaccc
     1141 cggcggaggg cgttctaccg cgaccgaggg cctaagctga tcgtctgcgg ggtggggagc
     1201 tgccttctgg acattccctt ctgattcccg tgcgccggga gcgtgcttcc gtgaccgccg
     1261 atacgcaccc gccgctccgg gccgtggcat cgcagcccta ctggagcacc ctgtggcgtc
     1321 tgatgcgcat gtcttcccgg a
//
LOCUS       DASRPQ010002233         1432 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2165574, whole genome shotgun sequence.
ACCESSION   DASRPQ010002233 DASRPQ010000000
VERSION     DASRPQ010002233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1432
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2165574"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(888..>1432)
                     /locus_tag="VFD73_25240"
     CDS             complement(888..>1432)
                     /locus_tag="VFD73_25240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="ISKra4 family transposase"
                     /protein_id="HZI77284.1"
                     /translation="RGLIPQAEYLLDWFHVTMRLTGMSRLAKGVREADQPDLSADLEE
                     MLEHLKWNLWHGKVPRALEILDELAYALEVEDASPEHRKLLKAVRAFEGYIAANRAII
                     PNYGERYRQGKIIATAFVESAVNQVVSRRFVKKQQMRWTEAGAHLLLQIRTQVLNQTW
                     RGTLSRWYPGMNATPQLKAA"
BASE COUNT          222 a          481 c          398 g          331 t
ORIGIN      
        1 cgcatccagc cgcgctgcac ccggtttttt tatgctctcc tttctctcac gtcgaagttt
       61 ccagtcccac ccgccgaggg aaactgggta gagtcgagat ctggcgcggt gggtgtaggt
      121 gcaatcataa cctgttgacc ggccctttcg gttgccggtg tctgaggaat tgaccctgcc
      181 tccgtttcca gatcccgctc atcaaaccga acgtgcagct gtcccgcatt cggctttcgg
      241 acaaggtggt tgatgcggtc gcccacccag ggcacccata gggcatgccc tggttcgctg
      301 aggcatctca gggcttctgg agcggcggaa cgctttattg aggttgctag gcttacgcca
      361 atcgctcgcg ctcttgctcc ttcggaccgg acccttgaac caaggcccct ttgctccgcg
      421 atcgttactc gcttcaacgc tcgtatgggc ctctccgact tccctgcccg cccggctcgg
      481 gtcctcacgg accgccggtt gcgcgagctt tcgcccacgc acgaggaagg atctcccgtg
      541 ttgacgcgcc agtcctttgc ccgcatgccc tcgccactac cccggtgccc cagagcggtg
      601 cctctatcgc tcacttcccg cttcggcctc ggtcttctca tgtttgccac cagatcgaca
      661 gtcacattgc ctcgttttcg gggcttgctc agcgttcact actcgttagg gcctgcgcgc
      721 tcactgatcc cctcaaaggg accttttcca ccagaggctt caaccatccc ggttacccag
      781 gacagccact ccggttgttt ccggctggag cgacagttgc cgggtgggat accttcctcc
      841 cactggacca acgcgccctt ttttcacggc gcacgacaaa gcgggggcta cgccgctttc
      901 agctgaggcg tcgcgttcat gccgggatac cagcgtgaca gcgtaccgcg ccaagtttga
      961 ttgagcacct gggtccggat ttgcaagaga aggtgggcgc cggcttcggt ccaccgcatc
     1021 tgctgtttct tgacaaaccg ccggctgacc acctggttga cggccgactc cacaaaggcc
     1081 gtcgcgatga tttttccttg ccggtaccgt tcgccgtaat tggggataat ggctcggttg
     1141 gcagcgatgt agccttcaaa tgcccggacg gccttgagca atttgcggtg ctcggggctg
     1201 gcgtcttcca cctccagcgc ataggccagt tcgtccagga tctccaacgc ccggggcacc
     1261 ttgccgtgcc acaggttcca cttgaggtgc tccagcattt cttccaggtc ggcactcagg
     1321 tccggttggt ccgcttccct tacgcctttg gccaggcggc tcatcccggt cagccgcatc
     1381 gtgacgtgga accagtcgag caagtactcg gcctgcggga ttaatcccct cg
//
LOCUS       DASRPQ010002234         1192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2445606, whole genome shotgun sequence.
ACCESSION   DASRPQ010002234 DASRPQ010000000
VERSION     DASRPQ010002234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2445606"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..437)
                     /locus_tag="VFD73_25245"
     CDS             complement(<1..437)
                     /locus_tag="VFD73_25245"
                     /inference="COORDINATES: protein motif:HMM:NF016413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LURP-one-related family protein"
                     /protein_id="HZI77285.1"
                     /translation="MFGSKRREQERFDSSATCYKMRQRMISIGDDYEIENDQGERVFK
                     LDGKALRIRKTILFKDMDDNELSKIKQRMLHLRDSMEIEGPDGNRMAMVHKAMITPFR
                     ERWIVKLEDGPDLHTHGNIVDHEYTIERDGTKVAEVSKRWFRIR"
     gene            766..>1192
                     /locus_tag="VFD73_25250"
     CDS             766..>1192
                     /locus_tag="VFD73_25250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77286.1"
                     /translation="MNNIDQPPGRHASDDPAVNDPDGRLAAYMMRTQTPLDLLALATL
                     WITVVPPGNFGPSPDAGAVALTVRIGVSAVYGVDMAIRSLLARRHVHYLVTHPLGCAS
                     VILPPLRVLFSLRLVRSIFRRGNLRRFLLAAAMLVLNGVA"
BASE COUNT          172 a          430 c          347 g          243 t
ORIGIN      
        1 cggatccgga accaccgctt ggagacctcg gcaaccttgg tcccgtcccg ctcaatcgtg
       61 tactcgtgat cgacgatatt cccatgggtg tgcaggtcag gaccgtcttc gagcttcact
      121 atccaccgct cgcgaaacgg agtgatcatg gccttgtgga ccatggccat ccggttcccg
      181 tccggcccct cgatctccat gctgtcccgc aggtgcagca tgcgttgctt gatcttgctc
      241 agttcattgt catccatgtc tttgaacagg atggtcttgc ggatccgcaa cgccttaccg
      301 tccagcttga agacgcgctc gccctgatcg ttctcgatct cgtagtcgtc tccaatggag
      361 atcatgcgct gccgcatctt gtagcacgtg gcggaactat cgaaccgctc ctgctcccgc
      421 ctcttgctac cgaacatagc caccctcccg tcatcgtctg ggtaccgcgc atgcccggca
      481 accagccgca cccacgatcc cggcgcggcg gggcccaggg gacaccctct ccaggtgatc
      541 ccgtccggca cggccacctc aagagaccca cgggcggccg cgcggccggc ctcgtcagaa
      601 cctcatctcg gcgctccacc cgccgatggc gctgctcccg ccgaccgatg ctcgggctgt
      661 cctgcaggac cccctcgagg agtcagcggt ggcctgaccc gccactgccg gtctggcgtc
      721 ctgtccggtg agtccggcga tcgcgtcggt gcgacgctgg tgggcatgaa caacattgat
      781 cagcccccgg ggcgacatgc cagcgatgac ccggctgtca acgaccccga tggccggctg
      841 gccgcgtaca tgatgaggac tcagacgccg cttgatcttc tggcgctggc cacgctgtgg
      901 atcaccgtgg tgccacctgg caacttcggc ccctcacctg acgccggggc cgtcgcgctg
      961 actgtccgta tcggtgtctc ggctgtctac ggggtcgata tggccatccg cagcctgctg
     1021 gcccggcgcc atgttcacta tctggtcacc catccactcg gatgcgcttc ggtgatcttg
     1081 cccccgctgc gggtgctctt cagcctgcgc ctggtcagat cgattttccg ccgcgggaat
     1141 ctccggcgct tcctgctggc cgccgcgatg ctggtcctca acggcgtggc cg
//
LOCUS       DASRPQ010002235         2287 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4653154, whole genome shotgun sequence.
ACCESSION   DASRPQ010002235 DASRPQ010000000
VERSION     DASRPQ010002235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2287
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4653154"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="VFD73_25255"
     CDS             complement(<1..195)
                     /locus_tag="VFD73_25255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77287.1"
                     /translation="MAVPASAQAPAITAAGDPSIRSDTIYKLAVNPSAYPDDAAVLLL
                     DDGVVRYEMDGTGSETYRQVT"
     gene            complement(395..1222)
                     /locus_tag="VFD73_25260"
     CDS             complement(395..1222)
                     /locus_tag="VFD73_25260"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HZI77288.1"
                     /translation="MRSTPRPLVAPSPQRPEPETWRNDQLTLAWLGHATVLMILLGSW
                     ILTDPALERRIGIGRGLAKVGPRRLVQPALRPRELPPLDLLLLSHAHMDHTDLGTLRR
                     LPRQIPVVVQPGNADLVGRFHQVHELAWGQTLSLNGITIESTAARHWGARMITDRHRG
                     YGGYLLQKGRHTVLFAGDTAYTDVLTRLAHRVNIDLAILPIGAYDPWIANHASPEQAW
                     LMFKRLGAEYVLPVHHSTFRLSREPVQEPIQRFLAAAGGERWRVVGTEIGASWSLAA"
     gene            1262..1705
                     /gene="dtd"
                     /locus_tag="VFD73_25265"
     CDS             1262..1705
                     /gene="dtd"
                     /locus_tag="VFD73_25265"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: protein motif:HMM:TIGR00256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HZI77289.1"
                     /translation="MRIVLQRVSRASVTIDGQTAGAIGPGFCLLVGFTHGDTEAQVDW
                     MAEKVAGLRLFSDQAGKMNLGLSEVGGAVLVISQFTLYGDAAKGRRPSFVDAARPEAA
                     IPLYQRFLEALKRLNLSVASGEFGADMQVEIHNDGPVTLVLDRAP"
     gene            1702..2274
                     /locus_tag="VFD73_25270"
     CDS             1702..2274
                     /locus_tag="VFD73_25270"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HZI77290.1"
                     /translation="MTPTPLTLASSSPRRRQLLEMLGIPVRVVPANIPEVRRSLETPV
                     DYVERLAREKALSVSGEMVLGADTTVVVRDAVLEKPADAAEALRMLQQLQGRTHQVVT
                     SVALVADESVHQATDVTNVTFRRVDDDFLEAYVATGEPMDKAGAYGIQGYGAALVERI
                     EGDFFSVMGLPVRLVLSLMREAGREYRFGR"
BASE COUNT          434 a          661 c          793 g          399 t
ORIGIN      
        1 agtgacctgc cggtaggtct cgctcccagt gccatccatc tcatagcgta cgactccgtc
       61 atccagcagc agaacggccg cgtcgtccgg ataggcgctc gggtttaccg ccaacttgta
      121 gatcgtgtca ctgcgaatgg agggatcgcc ggcggcggtg atggccggtg cctgggccga
      181 agccggcaca gccaaaacga ctgcgaagag gaaacaaaga ctacgcgcac gcatgggggc
      241 cccaggggtc ggtaccgcaa gggaagcgga gcagcctggg gtgcaagacg aaggccaggg
      301 tcgggaccag cgacgctggc cagaagctca ggatgtgaag gaaatggccg cgacagtgtt
      361 gacggaattc gccgcagcag agccacagga aaggttaggc ggccaagctc cagctggctc
      421 cgatctcggt tccgaccacc cgccagcgct ctccgcccgc cgcggcaaga aagcgctgaa
      481 tcggctcctg cacaggctct cggctcagcc ggaaagtgga gtgatgtacc ggcaggacgt
      541 actcggcgcc gagccgcttg aacatgagcc aggcctgctc gggagaggcg tggttcgcaa
      601 tccaggggtc gtaggctccg atcggcagta tcgcgaggtc gatgtttacc cgatgagcca
      661 gccgggtcag cacatcggta tatgcggtgt cgccggcgaa cagcaccgtg tgcctcccct
      721 tctgcaacag atacccaccg tacccgcggt gacgatcagt gatcatccgg gcgccccaat
      781 gccgggccgc cgtggattcg atcgttattc cattcaggct gagcgtctgt ccccacgcaa
      841 gctcgtgcac ctgatggaat cggccgacca gatcggcgtt acccggctgg accacaaccg
      901 gaatctgccg gggcagccgt ctgagcgttc ccagatcggt atgatccata tgggcgtggg
      961 agaggagcag caggtccagc ggcggcaact cccgagggcg cagcgcgggc tgtaccagac
     1021 ggcgcggccc gaccttggcc aaccctctgc cgatcccgat ccgacgctcg agcgccgggt
     1081 cagtcagaat ccaggagccc agcagaatca tgagcaccgt cgcgtggccg agccacgcaa
     1141 gggtgagttg gtcattgcgc caggtttcag gctccggccg ctggggcgag ggagctacca
     1201 agggccgagg agtggaacgc atgctgaatc gtacacgcaa acgggggtat tttcgcaagc
     1261 gatgaggatt gtgctccagc gggtctctcg agcatcggtg acgatcgacg gccagaccgc
     1321 cggagccatt gggccgggct tttgtctcct tgtcggtttt actcacggtg ataccgaggc
     1381 gcaggtagat tggatggccg agaaagtcgc gggtcttcgc ttattcagcg accaggcggg
     1441 aaagatgaat ctgggattga gcgaagtcgg tggggcggtg ctggtgatct cgcagttcac
     1501 gctgtatggc gatgccgcca agggccgacg gccctccttt gtggatgcgg cacgaccgga
     1561 ggcggctatt ccgctgtatc agagattcct cgaggcgctc aagcgattga atctgagtgt
     1621 tgcgtccgga gagttcggtg ctgacatgca ggtggaaatc cacaacgatg gcccggtcac
     1681 gctcgtgctg gatcgtgcgc cgtgaccccg acgccgctta cgctggcgtc ctcttcaccg
     1741 agacgacggc agctgctcga gatgttgggc ataccggtcc gagtggtccc ggccaacatt
     1801 ccggaggttc ggcggtcgct ggaaacgccg gtggactacg tcgagcgact ggcccgggaa
     1861 aaggcgctca gtgtttccgg agagatggta ctcggggcgg ataccaccgt agtggtgcgc
     1921 gacgcggtgc tggaaaagcc cgccgacgca gccgaggcgc tcagaatgct gcagcagttg
     1981 cagggacgga cgcaccaggt ggtaacctcc gttgccctgg tggccgatga gtcggtgcac
     2041 caggcgaccg atgttaccaa cgtcaccttc cgccgggttg acgacgattt tctcgaggcg
     2101 tatgtggcga ccggagagcc gatggacaag gcgggagcgt atggaatcca gggctacggc
     2161 gccgcgctgg tcgagcggat cgagggtgat ttcttcagcg tgatgggact tccggtccgg
     2221 ttggtgctga gcctgatgcg agaggcgggg agggagtatc gttttgggcg atgagcggct
     2281 cctagct
//
LOCUS       DASRPQ010002236         1146 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_884946, whole genome shotgun sequence.
ACCESSION   DASRPQ010002236 DASRPQ010000000
VERSION     DASRPQ010002236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_884946"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     regulatory      130..210
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
     gene            276..707
                     /locus_tag="VFD73_25275"
     CDS             276..707
                     /locus_tag="VFD73_25275"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HZI77291.1"
                     /translation="MLRALRERIQSEESGFTLIELLVVILIIGVLAAIALPNFLGQRS
                     KAQDSSAKSDARNLVSQLESCYTDNNTYSGTGNGNSCLSGNTGLSIGSAQGQVEVTAA
                     GTSTYTIVGHSKSGGDFTISKDASGNVTRTCANGSCSGGTW"
     gene            802..>1146
                     /locus_tag="VFD73_25280"
     CDS             802..>1146
                     /locus_tag="VFD73_25280"
                     /inference="COORDINATES: protein motif:HMM:NF018460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HZI77292.1"
                     /translation="METAFAGISGALIGSFLNVVVYRLPLGQSLVKPRSRCTKCDTPV
                     APRDNVPVLSWLLLRGRCRHCGESIPARYPAVELLTAVAFLSVVLVRGFHAELLALIP
                     FTAMLIAVAFIDL"
BASE COUNT          195 a          382 c          370 g          199 t
ORIGIN      
        1 gcacctggta attcaggcga ctaggcaagc agcaccggat cgggcgggcc cttggcccgc
       61 ccgtccactt ttcggggacc gttgtaaagg tttcccccgc ttatgccgtc ttctgcctca
      121 accagggcca cggtgaaagg gcaaactcgc tgtgaggcgg ggacgcaaag ctccggggct
      181 cctcggatgg gagtcggccg agctgccaac catggctagc cgggggtctc tggtgccaaa
      241 accccagata accctccgga ttggagaacc gactgatgct gcgagctctc cgagagcgca
      301 ttcagtcaga ggagtccggc ttcaccctga tcgagctcct cgtcgtcatc ctgatcatcg
      361 gcgtcctggc cgcgatcgct ctgccgaact tcctcggcca gcgctcgaag gctcaggact
      421 cgagcgcgaa gtcagacgcg cgcaacctcg tctcacagtt ggagtcctgc tacacggaca
      481 acaacaccta cagcggtacg ggcaacggca acagctgtct gtccggcaac accggcctga
      541 gcattggcag cgcccagggc caggtcgagg tgaccgctgc cggcaccagc acctacacga
      601 tcgtgggcca ctcgaagtcg ggtggcgact tcacgatctc gaaggacgcg agcggcaacg
      661 tcacgcgcac gtgcgcgaac ggaagctgct cggggggcac ctggtaacgc aggagtagcc
      721 tcgcgcgcat tgaacggggc gggtgttcgc acccgccccg ctcaagctcg gcgtagagag
      781 cgccgaaaga gccagtaagc gatggaaacg gctttcgcag gaatctctgg cgccctgatc
      841 ggcagcttcc tcaacgtggt ggtctaccgg ctgccgctcg ggcagtcgct ggtcaagccc
      901 cgctcgcgct gtacgaagtg cgacacgccc gtcgccccgc gcgacaacgt gccggtgctc
      961 tcgtggctcc tgctgcgggg gcgctgcagg cactgcggcg agtcgatccc ggcccgctat
     1021 ccggcggttg agctgctcac cgccgtggcg ttcctgtcgg tggtgctcgt tcgcggcttc
     1081 catgccgagc tgctggcgct gatcccgttc acggcgatgc tgatcgccgt cgcgttcatc
     1141 gatctg
//
LOCUS       DASRPQ010002237         1233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2802895, whole genome shotgun sequence.
ACCESSION   DASRPQ010002237 DASRPQ010000000
VERSION     DASRPQ010002237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2802895"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..352
                     /locus_tag="VFD73_25285"
     CDS             <1..352
                     /locus_tag="VFD73_25285"
                     /inference="COORDINATES: protein motif:HMM:NF019375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1611 domain-containing protein"
                     /protein_id="HZI77293.1"
                     /translation="LLHGSCPDALILCHQSTRQYIGDYREAQWLRLPPLKEYIRLYET
                     IGSAVHPTRVIGICLNTYDMSDEAARRACEAATKETGLPATDPVRFDPAPLVDTVRKG
                     RQAYLTARRDPVSA"
     gene            415..915
                     /locus_tag="VFD73_25290"
     CDS             415..915
                     /locus_tag="VFD73_25290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77294.1"
                     /translation="MFAGPPLPLSPEFPLAHLIELLNPVDLGHSSTEGLGVWLRGLDG
                     AISLVVSGRRHGRCCKMLLSGDLGLLLGRCSQIAVRDGCQARVLAAEALIHWRALQVV
                     TGMPCLPAEEKLREIFPAAVLDPAGFRIALTSIPPEAVLAECIRHGITVTETRIVYQS
                     GAAPSL"
     gene            953..>1233
                     /locus_tag="VFD73_25295"
     CDS             953..>1233
                     /locus_tag="VFD73_25295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77295.1"
                     /translation="MEASLASANDVISRIAAYLRIDGDLVLRSGFRVLGIWVLAWFAL
                     RVVRLTAHRIEKSVDDGDDSVTTLREKRGRTIAQLLRSVGRVVTVTIAIL"
BASE COUNT          221 a          408 c          360 g          244 t
ORIGIN      
        1 actcttgcac ggctcctgtc ccgatgccct gatcctgtgc catcaatcga ctcgacagta
       61 tatcggggac tatcgagagg cgcagtggtt aagacttcct ccattaaagg aatacatccg
      121 actctacgaa accatcgggt cagccgttca tcccacgcgg gtcataggga tctgtctcaa
      181 tacctacgac atgtccgacg aggccgcccg tcgcgcctgc gaggcggcca ccaaagagac
      241 cggactccct gcgaccgatc cagtccggtt tgatcctgcg ccactggtag acacggttcg
      301 caaaggccgc caggcgtacc tcacagcgcg aagggacccc gtctccgcat aaatcgccac
      361 ggggagcgct gttatgatgg cgcgcatcga ggttcgctgg gccatggttc ccccatgttc
      421 gccggccctc cactgcctct ctcccccgag ttccctctcg ctcacctcat agagcttctc
      481 aatccagtgg acctcggcca ctcatcaact gaaggcttgg gcgtgtggct tcgtggtctg
      541 gacggagcaa tctccctggt ggtatcggga cgaaggcatg ggcgctgctg caagatgctg
      601 ctcagcggag atctgggact cctcctgggc cggtgtagtc agatcgcggt ccgagatggg
      661 tgccaggctc gagttctcgc tgcagaggcg ctcatccact ggcgggcgct ccaggtagtc
      721 acgggcatgc cgtgcctgcc cgccgaagag aagctgcgtg aaatcttccc ggcggcagtg
      781 ctcgacccgg caggcttccg gattgctctc accagcattc cccctgaagc cgtgcttgcc
      841 gaatgtatcc gacacggaat cacggtcacg gaaacccgaa tcgtgtacca gagcggggca
      901 gcgccttcac tttagttgac gcaccgcagg gcaggtctct acgttaggcc acatggaggc
      961 ctcgctcgct tcggcaaacg acgtcatcag ccgcatcgca gcctatctcc gcatcgatgg
     1021 cgacctcgtc ctgcggagtg ggttccgggt gctcggcatc tgggtgctcg cctggtttgc
     1081 tctccgggtt gtccggctca cggcgcaccg catcgagaaa tcagtcgatg acggcgatga
     1141 ctcggtcacc accctccgag agaagcgtgg ccgcaccatc gcccagctgc tccgaagcgt
     1201 cggacgcgtg gtcacggtca ccatcgccat tct
//
LOCUS       DASRPQ010002238         1402 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_266853, whole genome shotgun sequence.
ACCESSION   DASRPQ010002238 DASRPQ010000000
VERSION     DASRPQ010002238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1402
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_266853"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..1226)
                     /locus_tag="VFD73_25300"
     CDS             complement(63..1226)
                     /locus_tag="VFD73_25300"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HZI77296.1"
                     /translation="MNDAITPFTLAVPQADLEDLNRRIDQTRWPDAETVDDWTQGAPL
                     AKVKALVDHWRHRYDWRRCEAMLNNWSQYKTKVDGLDIHFLHVRSKHENALPLIITHG
                     WPGSVIEFMKIIGPLTDPTAHGGRPEDAFHVVAPSLPGHGFSDKPTATGWDVPRIANA
                     WIVLMRRLGYTRWVAQGGDWGSLVATAIGVMKPDDCAAIHVNMPLVFPEPDQLQDMDA
                     FEQAAVASLAHWEEKGSGYFKQQSTRPQTLGYGLADSPVGQASWIYEKMWAWTDNQGN
                     PEDALTLDEMLDNIMRYWLPGNATSSARLYWESVANAAPTKLANVASTRLEIPVGVSI
                     YPRETNRPSRRWVDRWMPNLIHYNILDRGGHFAAWEQPALHAKEMRDCFAKVR"
BASE COUNT          238 a          412 c          466 g          286 t
ORIGIN      
        1 gtttgtgaca gccccgatca gggctctgct gaatcttgat ccggcaagtt agtttgccga
       61 ggtcagcgca ccttggcgaa gcagtcgcgc atctccttgg cgtgcagcgc tggctgctcc
      121 caggcggcga agtggccccc ccggtccagg atgttgtaat ggatcaggtt tggcatccac
      181 cgatcaaccc agcgccgcga ggggcggttg gtctcacgcg gatatatgct gacgcctacg
      241 ggaatctcca gtctggtcga tgcgacgttg gccagcttgg tcggtgcggc gttggccacg
      301 ctctcccagt acagccgggc cgaggaggtg gcattgcccg gcagccagta gcgcatgatg
      361 ttgtccagca tctcgtccag ggtcagtgcg tcctcggggt ttccctggtt gtcggtccaa
      421 gcccacatct tttcatagat ccaggacgcc tggccgaccg gcgagtcggc gagcccgtag
      481 cccagcgtct gcggccgcgt cgactgctgc ttgaaatagc ctgagccctt ttcctcccaa
      541 tgggccagcg acgccacagc ggcctgctca aacgcgtcca tgtcctggag ttggtcgggc
      601 tcaggaaaca ccagcggcat gttgacatgg atcgcggcgc agtcatcagg cttcatcacg
      661 ccgatggccg ttgccaccaa cgagccccag tcgccgccct gggcgaccca gcgggtgtag
      721 ccgaggcgtc gcatcagaac gatccaggcg ttggcgatcc gggggacgtc ccagcccgtg
      781 gcggtcggct tgtcggagaa gccgtgaccg gggagcgagg gggcgaccac atggaaggcg
      841 tcctcgggcc ggccgccatg ggcggtggga tcggtcaagg ggccgatgat cttcatgaat
      901 tcgatcaccg aaccgggcca gccgtgggtg atgatcagcg gaagcgcgtt ctcgtgcttc
      961 gagcggacgt gcaggaagtg gatgtcgagg ccgtcgacct ttgtcttata ctggctccaa
     1021 ttgttcagca tcgcctcgca gcggcgccag tcgtagcggt gacgccagtg atcgaccagc
     1081 gccttgacct tggcgagcgg ggcgccttgg gtccagtcgt cgactgtctc cgcatccggc
     1141 cagcgggtct ggtcgatgcg gcggttgagg tcctcgaggt ccgcctgcgg gacggcgagg
     1201 gtgaaggggg tgatggcgtc attcatggat ttcttctccg tttcggtacc ggattttttc
     1261 acagcaacaa gctgccagat cgtttagcga tgcgtctaaa acatctttac tatcagactg
     1321 atgccgacag ggtatcggta tggaactgcg acatctcaga tatttcgtag ctgtcggcga
     1381 ggaacaacat tatgggcggg ca
//
LOCUS       DASRPQ010002239         1670 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1852465, whole genome shotgun sequence.
ACCESSION   DASRPQ010002239 DASRPQ010000000
VERSION     DASRPQ010002239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1670
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1852465"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..777
                     /locus_tag="VFD73_25305"
     CDS             <1..777
                     /locus_tag="VFD73_25305"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HZI77297.1"
                     /translation="AIVYHVAGLVAAPSEADFLHANRDGTRNVLAAAERSGSSPRFIL
                     VSSLAAGGPAPRGLPLEGTEAPRPVTAYGRSKLAGENVVRQSALPWSIVRPPIVYGPR
                     DREVLKVFRMARFGVAPVFGDGSQELSAIHAADLTNALIAVAEHPSTAGRVYNACHPE
                     IFSSRDFGRAVGQAMHRSVVTVPVPALLGRALLSITETTAKLAGQTTILTTDKAHEFF
                     QPAWTGDPRPLTRDTGWRARFDLQTGLADTYQWYRRAGWL"
     gene            768..1664
                     /locus_tag="VFD73_25310"
     CDS             768..1664
                     /locus_tag="VFD73_25310"
                     /inference="COORDINATES: protein motif:HMM:NF025736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HZI77298.1"
                     /translation="MAVALPLLTEKAAEWRSPLRAVDLLLLGYLGLVSAVAASRVHEQ
                     PLCWWLLLAHGLFVLLLFLVTRPGLGPIGRTIRELYPLFLLPGLYSELDIINSPGRPV
                     YDFAVQHWEQVVFGMQISREWWQRYPSVFWSTVFHSAYLSYYLIISAPALYFAFKGDL
                     IAVRRFVLIVMATFVVCYLFFIFFPVAGPYYMFPRPAAWFTANTPARLAYDALSSGSS
                     YGAAFPSSHVAAALAATAAALRASRRLGLILLVPTALLTLGVVYCQMHYGVDALAGLL
                     VGGLVTAIVGRMNRITAVSRER"
BASE COUNT          249 a          531 c          535 g          355 t
ORIGIN      
        1 gcgatcgtgt atcatgtggc gggtctggtc gctgctccga gcgaggccga cttcctccac
       61 gccaaccggg acgggacccg gaacgttctg gcagcagctg agcgttcggg tagttccccc
      121 cgcttcattc tcgtatcctc cctggcagct ggagggccgg caccgcgcgg gcttcccctc
      181 gagggtactg aagcaccgag gccggtgact gcctacgggc gaagtaagct cgcaggcgaa
      241 aacgtcgtgc ggcagagcgc tcttccctgg tcgatcgtgc gaccgcccat cgtgtatggc
      301 ccccgcgatc gtgaagtttt gaaggtcttc cgaatggccc gtttcggggt tgctccggta
      361 ttcggcgatg ggtcgcagga gctctccgcg attcacgcgg cggacctgac aaatgcgttg
      421 atagcagtag cggagcaccc gtcgactgcc ggccgcgtct ataatgcatg tcatccggag
      481 attttcagca gtcgcgactt cggacgtgcc gtgggacagg cgatgcatcg ctcggtggtc
      541 accgtaccgg tcccggcgct cctcggtcgt gcgctgctct ccatcactga gacaacggcc
      601 aaacttgccg gacagacgac gatcctgacc accgataagg ctcacgagtt ctttcagccg
      661 gcctggaccg gagatccacg acccctcacc cgggataccg gctggagggc aaggttcgac
      721 ctccaaaccg gcctggcgga cacctatcag tggtatcgcc gcgccggatg gctgtagcac
      781 tgccgctgtt gacggagaag gccgccgagt ggcggagccc cctccgagcg gtggacctcc
      841 tgctcctcgg gtatctcgga ctcgtctctg ccgtggctgc gagccgagtg cacgagcagc
      901 cgctgtgctg gtggctgctg ctggcgcacg gcctgtttgt gctgctgctc ttcctcgtca
      961 ctcggccggg gctgggcccc attggccgga cgatccggga attgtacccg ctgttcctgc
     1021 tgccagggtt gtacagcgag ctcgatatca tcaactcgcc cgggcgtccc gtctacgatt
     1081 tcgcggtgca gcattgggaa caggtggtgt ttgggatgca gatcagccgg gaatggtggc
     1141 agcgatatcc cagtgtgttt tggtccacgg tcttccactc cgcctatctc tcctactatc
     1201 tcatcatctc cgcacccgcc ctgtatttcg cgttcaaggg tgacctgatc gcggtgcgac
     1261 ggtttgttct gatcgtgatg gccaccttcg tcgtctgcta tctcttcttc atcttctttc
     1321 ccgtggccgg cccgtactac atgtttcccc ggccggcagc gtggttcacc gcgaacacgc
     1381 cggcccggct ggcatacgac gcgctctcga gcggcagctc ctacggagcg gcgttccctt
     1441 cgtcccatgt cgcggcagca ctggcggcca ccgctgcggc acttcgagcg tcacgccggc
     1501 tcggactgat tctactggtc ccgactgcgc tgctcacgct cggcgtggtc tattgccaga
     1561 tgcactatgg tgtggacgcg ctggctgggc tgctggtggg cgggctggtg actgcgatag
     1621 tggggaggat gaatcggata acagcggtaa gccgtgagcg gtgagcggga
//
LOCUS       DASRPQ010002240         3019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4021384, whole genome shotgun sequence.
ACCESSION   DASRPQ010002240 DASRPQ010000000
VERSION     DASRPQ010002240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3019
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4021384"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1222)
                     /locus_tag="VFD73_25315"
     CDS             complement(<1..1222)
                     /locus_tag="VFD73_25315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77299.1"
                     /translation="MLVSTLVMIVYHNRFWAPADEGTYAHVAERILQGQVLHRDVQDA
                     HAGNIDFVNAAAFRLFGLRMVSMRYPLALLTVIQAGLIFFALKPGGVATALIGGLVLT
                     SLSFVQYLNPTANWYCLFLAVATIAWLAWNPTGLRWPHIVTGFLVGTTFLFRQLSGVF
                     LASGVLVYLLLQSPRPGAGSGRWLARAVLAVIAIGNAWYILRTTDPVGWLLFGVWPVA
                     VVLWACARTRRSDREVLALLRDLLLGGLISAAPLLAYYVAHGAVGDWWRDSFGTAMSF
                     PTLGFMKRPGYLMLGILAWRGFHSGDLARIINAGLYTCLLLIAAVLGVLLFRALVRRS
                     RWSVHPLPVIATFYALVSLHYQLPIYLFYTVGLSSAAVLFLGVESTPGTRRITLAVFA
                     AIAGVALYYQAAMPM"
     gene            1227..1436
                     /locus_tag="VFD73_25320"
     CDS             1227..1436
                     /locus_tag="VFD73_25320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77300.1"
                     /translation="MTRAASERASQEPDLHSVQPWPDREPGHPITSEESSRVQLRSCG
                     MIGGGQRVAYLDGNVSERTQAGVMA"
     gene            complement(1440..2159)
                     /locus_tag="VFD73_25325"
     CDS             complement(1440..2159)
                     /locus_tag="VFD73_25325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77301.1"
                     /translation="MTGVRPGDPFDTGAPADPFRRQMHELEQGLTLRIEEQARENRRL
                     RRLWMGTVVVGGILLGLGTALVIVSARHGLPGTVAEVIEARQFLLRDANGAIRGTWGT
                     AANGALRLNLQSPGSKAGLSLASLPDGASGITVRDSAGRSRAVLGLLPDQTVSLLLAD
                     ENGTTRTVLSLVRGGSSTLVFADRSGDAKVGMGVDARGQSTLTLPEPPESRVETPAPE
                     DSEHSASPPATAAPKTAPSRP"
     gene            complement(2156..>3019)
                     /locus_tag="VFD73_25330"
     CDS             complement(2156..>3019)
                     /locus_tag="VFD73_25330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77302.1"
                     /translation="FEILGPAVNSSKSIFLYGHPGNGKTAIAEAISEMLGGVLYIPYA
                     VDIDGQIMQVFDPVHHEELTVVETGGIESLWRKGPSYDRRYARVKRPVVLTGGELTLD
                     QLDLRYDSFTKVYQAPFQVKANGGVLIVDDFGRQRVPPRDLLNRWIVPLEKRLDYLTL
                     HTGGKFPVPFDCLLIFATNLDPSELVEEAFLRRIHYKIPVVDPTREQYEQIFRAQCVS
                     EGLRYDPAAVAYVFSEFYDRFGIQPRGCHPRDLIAHILDISKYRELNPELSTDLLQGA
                     CRSYFLVSGAA"
BASE COUNT          666 a          903 c          940 g          510 t
ORIGIN      
        1 tcatcggcat tgccgcctga tagtagagcg ccaccccggc gattgccgcg aacacggcca
       61 gcgtgatcct ccgggtaccg ggtgtcgact caacgcccag gaacaaaacg gcagccgaac
      121 tgagtcccac tgtataaaac aggtaaatcg gtaactggta gtggagtgac actagggcgt
      181 agaacgtggc aatcaccggc agggggtgaa cgctccaacg gctgcggcga accagcgctc
      241 ggaacaggag gacaccaagc acggccgcaa tcaggagcag gcaggtatac aagcctgcgt
      301 tgatgatcct ggccagatca ccggaatgaa aaccgcgcca ggccagaatt cccaacatca
      361 gataccctgg tcttttcatg aagcctagag tagggaagga catggcggtg ccgaagctgt
      421 ctcgccacca atcgcccacg gctccatgcg ccacgtagta agcgagcaga ggagcggctg
      481 agatgaggcc gccaagcaag agatcccgca gcagcgcgag cacttcccgg tcggatcgtc
      541 tcgttcgagc acaagcccag agcacaacgg caacgggcca tacgccaaaa agcagccaac
      601 cgacggggtc ggtggtccgc aggatgtacc aggcgttgcc tatggcgatc accgcaagca
      661 ctgcacgcgc caaccaccgt ccactgcctg ctcccggccg agggctttgc agtagcagat
      721 acacgagtac accagatgcg aggaaaacgc cggagagctg gcgaaagaga aaggtggtgc
      781 cgacgagaaa cccagtgacg atgtgtggcc accgcaaacc ggtcggattc cacgcgagcc
      841 aggcgatggt cgccacagcc agaaacaagc aataccaatt ggcggtcgga ttcaggtatt
      901 gaacgaaact gagcgaggta agcaccaggc cgccaatcag agcggtagca acacctccag
      961 gcttgagggc aaaaaagatg agcccggctt ggatcacggt caggagcgcg agcggatagc
     1021 gcatgctgac catccgcagg ccaaacaacc ggaatgcggc cgcgttgacg aagtcgatgt
     1081 tcccggcgtg cgcatcctga acgtcacggt ggagcacctg gccttgcagg atgcgctcgg
     1141 caacatgggc gtatgtgcct tcatcagccg gtgcccagaa tcgattgtga tagacgatca
     1201 tcaccagggt gctgacgagc aatactatga cgagagcggc cagtgaacgg gcatcccagg
     1261 agccggatct ccactcagtc cagccgtggc ccgaccggga accaggccac ccgatcacct
     1321 cggaggagtc ttcccgagtc cagctacggt cctgtggcat gattgggggt ggccagcgag
     1381 tggcctatct cgatgggaac gtcagcgaga ggacccaggc cggcgtcatg gcctgaccgc
     1441 tacgggcgag acggggctgt tttgggggca gctgtcgctg gaggggaggc ggagtgttcc
     1501 gagtcttcgg gggccggagt ttctactcgg ctctcgggtg gctccggcaa ggtgagagtg
     1561 ctctgccccc gggcatccac gcccatgccg actttggcat ccccgctgcg gtcggcaaag
     1621 accagggtgg atgatccacc ccgcaccagg ctgagaacgg tacgggtcgt gccgttctcg
     1681 tccgccagga gcagactgac cgtctgatcg ggcagcagtc ccagcaccgc gcgggaccgg
     1741 ccggccgaat cgcgcacggt tatgccggag gctccatctg gcagtgaggc cagactgagg
     1801 cctgccttgc tgccgggaga ttggaggttg agacgcagcg ctccatttgc ggcagtgccc
     1861 caggtccccc gtatggctcc atttgcgtca cgcaagagga attgtcgagc ttcgatcact
     1921 tcggcaaccg ttcctggcag accgtggcga gccgacacaa tgaccagcgc ggtgcccaga
     1981 ccaagcaaga tgcccccgac tacaaccgtc cccatccaga ggcgccggag ccggcgattc
     2041 tcccgggctt gctcctcgat tcgaagggtg agcccctgct ccagctcgtg catctggcgg
     2101 cgaaaagggt ctgccggagc tccggtatcg aatggatctc ctggtcgaac accggtcatg
     2161 cagcaccgct cacgaggaag tacgaacggc aggcgccctg gagtagatcg gtgctgagtt
     2221 cggggttgag ctctcggtac ttcgaaatat ccaggatatg agcaatcaga tcgcggggat
     2281 ggcagccacg gggctggatt ccaaaccggt cgtagaactc gctaaaaacg taggcgacag
     2341 ccgcggggtc gtaacgcagt ccctccgaaa cgcactgggc ccggaagatc tgctcatact
     2401 gctctcgcgt tgggtctact actggaatct tgtaatggat tctccgtaga aacgcttctt
     2461 ccacgagttc cgaagggtcc aagttcgtgg caaaaatcaa gaggcaatcg aagggaaccg
     2521 gaaactttcc tcccgtgtgg agggtcaagt aatcgagccg cttttcgagc ggcacgatcc
     2581 accggttgag caggtcgcgg ggcggaactc tttgccggcc gaaatcgtcc acgatcagga
     2641 cgcccccgtt cgcctttacc tggaacggtg cctgataaac cttcgtgaac gaatcgtacc
     2701 gaaggtcgag ctgatccagg gtaagttcgc ctccggtcaa cacgacaggt cgtttgactc
     2761 tggcataccg gcgatcataa ctcggtccct tacgccaaag agactcgatt ccccctgtct
     2821 ccaccacggt cagttcctcg tggtgaaccg ggtcgaagac ctgcatgatc tgcccgtcga
     2881 tgtcgaccgc gtaggggatg tagagcactc cgcccaacat ctccgagatc gcctcggcga
     2941 tcgcggtttt accgtttccc ggatggccgt acaggaagat ggacttcgag gagttcacgg
     3001 ccgggcccag gatctcgaa
//
LOCUS       DASRPQ010002241         1384 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2446214, whole genome shotgun sequence.
ACCESSION   DASRPQ010002241 DASRPQ010000000
VERSION     DASRPQ010002241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1384
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2446214"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            32..1363
                     /locus_tag="VFD73_25335"
     CDS             32..1363
                     /locus_tag="VFD73_25335"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZI77303.1"
                     /translation="MLGLDTVDEDDLYEALDWLGGQQERIEQVLAHRHLSEGSLVLYD
                     VSSSYLEGRHCELAQFGHNRDGKRGKMQIVYGLVCTRQGCPVAIEVFEGNMADPKTLS
                     AQITKLKHRFGLTRVILVGDRGMLTEARLRDEVQPAGLDWITSLRAPAIQDLVKTGAF
                     QPSLFDQRELGEITAPDYPGERLVVCRNPLLAEERRRKRQELLAETEAQLHKIAAATR
                     RARRPLHGKDQIGIRVGKVLGRSKMGKHFDYSITEDDLTFSRKEESIQREADLDGFYI
                     VRTSVSEQALNAVETVAAYKSLAMVERAFRCLKTVDLSIRPIYHRLARRVRAHVFLCM
                     LAYYVEWHMRQVLKPLLFEDEDRLVANAERSSLVINAQRSDGAKAKDATKRTVDGLPV
                     QSFQALLAHLATMARNVVTFGDAAETTCVKLTSPTPIQNRAFDLLAIPLAL"
BASE COUNT          255 a          435 c          442 g          252 t
ORIGIN      
        1 cccccagacc gcgaccagtt ccctgggagc ggtgctcgga ctggacaccg tcgacgagga
       61 cgacctgtac gaggcgctgg attggctggg cggccagcag gagcggatcg agcaggtctt
      121 ggcgcacaga catctgtccg agggatcgtt ggttctttat gacgtctcct ccagctatct
      181 ggagggacgg cactgcgagc tggcgcagtt cggccataac cgggacggca agcgcggcaa
      241 gatgcagatc gtctatggcc ttgtgtgcac gcggcagggc tgtccggtgg cgattgaggt
      301 gttcgagggc aacatggccg atcccaagac cctgagcgcg cagatcacca agctgaagca
      361 tcggttcggg ttgacccgcg tgatcctggt cggtgatcgc ggcatgctta cggaagcccg
      421 cctccgcgac gaggtgcaac cggccggtct ggactggatc acgtccttgc gcgccccggc
      481 catccaggat ctggtgaaga ccggggcgtt ccagccgtcg ctgttcgacc agcgtgagct
      541 tggcgagatc acggccccgg actatccggg ggaacggctg gtggtgtgcc gcaacccgct
      601 gctggccgag gagcgccgac gcaagcgcca ggagctgctg gcggagaccg aagcgcagct
      661 tcacaagatc gccgcggcga cccgacgcgc gcggcggccc ctgcacggca aagaccagat
      721 cggcatccgg gtcggcaagg tgctgggccg gtcgaagatg ggcaaacact tcgactactc
      781 catcactgaa gatgacctca cgttctcccg caaggaagag agcattcagc gcgaggcgga
      841 cctggatggc ttctacatcg tccggaccag cgtttccgaa caagcgctca atgcggtcga
      901 gacggtcgcg gcctacaaga gcctggcgat ggtggaacgg gccttccgct gcttgaagac
      961 ggtcgacttg tcgatccggc cgatctatca ccgtctggcg cggcgggtcc gcgctcatgt
     1021 cttcctgtgc atgctggcct attacgtcga atggcatatg cgtcaggttc tcaagccttt
     1081 actcttcgaa gacgaggaca ggcttgtcgc caacgcggaa cgatcgtctc tggtcatcaa
     1141 cgctcagcgc tctgacggtg ccaaggccaa ggacgccacc aaacggactg tcgatggact
     1201 gcccgttcag agtttccagg ccctgctcgc tcatcttgcc accatggccc gcaatgtcgt
     1261 gaccttcggc gatgccgctg aaaccacttg cgtcaaactg acgagcccga caccgatcca
     1321 gaaccgcgcc ttcgatctcc ttgctattcc ccttgccttg taagctgtag gcaggcggtc
     1381 tccc
//
LOCUS       DASRPQ010002242         1144 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2446526, whole genome shotgun sequence.
ACCESSION   DASRPQ010002242 DASRPQ010000000
VERSION     DASRPQ010002242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2446526"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1144)
                     /locus_tag="VFD73_25340"
     CDS             complement(<1..>1144)
                     /locus_tag="VFD73_25340"
                     /inference="COORDINATES: protein motif:HMM:NF016994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="erythromycin esterase family protein"
                     /protein_id="HZI77304.1"
                     /translation="GSSSDYDLLLDLIGDARVVLLGEASHGTHEFYRERARITQRLLE
                     EKDFSAVAVEADWPDAYRVNRWARSVGGDSSALEALGGFQRFPRWMWRNRDVVTFIEW
                     LRQFNESRPVRSRVGFYGLDLYSLYGSMEAVIGYLDQVDPAAAQRARYRYSCFEDFGE
                     DTQAYGYAAEFGLTSSCEDHAVQQLLELQREAGKLSTQDGSIPDDEFFFAEQNARLVK
                     NAEEYYRTMFRGRISSWNLRDRHMAETLEALPAHLDRSQGQSKVVVWEHNSHIGDARA
                     TSMGDAGEWNVGQLSRERLGSDAVLVGFSTYEGTVTAASDWDAPAEHKRVRPALAGSW
                     EALLHELEERNFLLPLRGGASSSELLDQTRLERAIGVIYRPETERL"
BASE COUNT          225 a          401 c          306 g          212 t
ORIGIN      
        1 ctcagtcgct ccgtctcggg tcgatagatg actccgatgg ctcgctccaa ccgggtctgg
       61 tccagcaact cgctactcga agctccaccc cggagtggca aaagaaagtt cctctcctca
      121 agctcgtgca acaatgcttc ccaacttccc gcgagggcag gccgcactcg cttgtgctct
      181 gcgggagcat cccagtccga tgcggctgtt accgtgcctt cataggtgct gaagcccacg
      241 agcactgcgt cgctcccgag gcgctcgcgc gaaagctggc caacgttcca ctcgccggcg
      301 tcacccatgc tcgtggctcg cgcatctcca atatgagagt tgtgctccca caccaccacc
      361 ttactctgac cctggctcct gtccaggtga gccggcaacg cttcgagtgt ctccgccatg
      421 tgtcggtcgc gcaggttcca cgacgagatg cgcccccgga acatcgtccg ataatattcc
      481 tcggcgttct tgaccaatcg tgcattctgt tccgcaaaaa agaattcgtc atccgggatg
      541 ctcccgtcct gggtcgacaa tttgccggcc tcgcgctgca gttcgagcag ctgctgcacc
      601 gcatgatcct cgcaggatga agtcaacccg aactcagcgg catagccgta cgcctgggtg
      661 tcctctccga aatcctcaaa gcaggagtac cggtagcggg cacgctgggc cgctgcaggg
      721 tccacctgat cgaggtagcc aatcaccgcc tccatggagc catagaggga atacagatcc
      781 aggccataga atcccacccg gctccggact ggacgtgact cgttgaactg gcgcagccac
      841 tcgatgaacg tgaccacgtc ccggttgcgc cacatccaac gcgggaaccg ctgaaacccg
      901 ccgagcgcct cgagcgccga tgagtcacca ccgaccgagc gcgcccaccg gttcacccga
      961 tacgcatcgg gccagtcggc ctctaccgca acagccgaga aatccttctc ttccagcagc
     1021 cgctgcgtta ttcgggcccg ctcccggtaa aactcatgag tgccatggct ggcttcgccg
     1081 agcaacacga cccgggcatc gccgatcagg tccagcagaa gatcgtagtc actcgacgat
     1141 cccg
//
LOCUS       DASRPQ010002243         1389 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3430732, whole genome shotgun sequence.
ACCESSION   DASRPQ010002243 DASRPQ010000000
VERSION     DASRPQ010002243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1389
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3430732"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..440)
                     /locus_tag="VFD73_25345"
     CDS             complement(<1..440)
                     /locus_tag="VFD73_25345"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZI77305.1"
                     /translation="MSSPGPEWARLTDQDVVLRARSGQDAAYRELIRRYERPVFALLF
                     RMVRDRELAEDLAQETFVKALNAIESYRPEFKFSSWIFKIANNAAIDHLRRRELDTLS
                     LDGSPHAETPEAMQATALQIGARQESPLDTVEAKELGSAIEAAIG"
     gene            491..1219
                     /locus_tag="VFD73_25350"
     CDS             491..1219
                     /locus_tag="VFD73_25350"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone/menaquinone biosynthesis
                     methyltransferase"
                     /protein_id="HZI77306.1"
                     /translation="MLASDRQLPVWGGPEKRAYVRNLFTAIAPTYDRLNHIISFQFDR
                     GWRRRAVARLNWTRRPEGIYLDLCAGTLDFGAALASRPGFRGKVVGADFVQPMLELGR
                     HKSPLLRPVAADALELPFPEQAFDGAMVGWGIRNLVDLDTGFREAARVLKPGARLVIL
                     EMALPPKQPLRTVYELYFRRVMPAIGRLVSKHTTAYSWLPESTRVFPAPPELARRIEA
                     QGFEKVQYELLMGGVCALYAATRR"
BASE COUNT          229 a          446 c          453 g          261 t
ORIGIN      
        1 ccgatcgccg cttcgatggc actccccagc tccttggctt ccacggtgtc gagtggactc
       61 tcttgtcggg ctccaatctg gagcgcggtg gcctgcatcg cttccggcgt ttcagcgtgc
      121 ggcgagccgt cgagcgagag ggtatccagc tcgcgccgtc ggagatgatc gatcgccgca
      181 ttgttggcga tcttgaatat ccaggaggaa aatttgaatt cggggcgata cgactcgatg
      241 gcattcagcg ccttgacgaa ggtctcctgg gccaggtcct cggccagctc gcggtcgcgt
      301 accattcgga acaagagcgc gaacaccggc cgctcatagc gccggatgag ctcccggtag
      361 gcggcgtcct gccctgaccg cgcccgcagg accacgtctt gatccgtgag gcgggcccat
      421 tccgggccgg ggctactcac cagcggctcg gcttgcggag gagcttccgg gagcactaca
      481 ttcagcgcct atgttagcct cggatcgtca gttacctgtt tggggcggtc cggaaaagcg
      541 ggcctacgtc cgcaacctct tcactgcaat cgcccccacc tacgatcggc tcaatcacat
      601 catcagcttc cagttcgacc ggggctggag gcgccgtgcc gttgcccgtc tgaactggac
      661 ccgtcgaccc gaaggaatct atctcgacct ctgcgccgga accctggact tcggggccgc
      721 gctggccagc cggcccggct ttcgggggaa agtcgtcggg gccgatttcg tccaaccgat
      781 gctcgagctc ggccgccaca agtccccgct gctccgcccg gtggcggccg atgccctgga
      841 gctgccgttt cccgagcagg cattcgacgg tgccatggtg gggtggggaa ttcgcaatct
      901 ggtggacctc gacaccggat tcagggaggc agcccgggtg ctcaagcccg gcgcgaggct
      961 ggtgattctg gagatggcgc tgccgccgaa gcaaccgctg cgaacggtct acgagttgta
     1021 cttccgccgg gtgatgccgg ccatcgggcg gctggtctca aaacatacga ccgcctatag
     1081 ctggcttcca gagtcgacgc gggtgtttcc ggcaccgccg gagctggcac gccggatcga
     1141 agcgcagggt ttcgagaagg tgcagtacga gctcttgatg ggcggcgtgt gcgcactcta
     1201 cgcggcgacc cgccggtgac acactgctca gggtgatatg gcgctagaca atctccggga
     1261 cttcatcaaa gccatcgaca gcatcggtgc gctggtgcgc atcagccacc cggtcgccgc
     1321 tcgattggag atcgccgaga tcgcagaccg ggtcatgaaa agcccgggtg gcggacccgc
     1381 ccttttgtt
//
LOCUS       DASRPQ010002244         5453 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3731823, whole genome shotgun sequence.
ACCESSION   DASRPQ010002244 DASRPQ010000000
VERSION     DASRPQ010002244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5453
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3731823"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..369
                     /locus_tag="VFD73_25355"
     CDS             <1..369
                     /locus_tag="VFD73_25355"
                     /inference="COORDINATES: protein motif:HMM:NF037785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77307.1"
                     /translation="PSGVMAAACAGAKQVAGSLTLGILPGTSEGAGPDVDVAVFTGMA
                     DARNAINVLSSDIIVACGVEGPGTTSEVALAIKAGKPVILLGASSAARAFFRSVGEWL
                     PAADPEEAVRLIEQKLEDTQ"
     gene            366..686
                     /locus_tag="VFD73_25360"
     CDS             366..686
                     /locus_tag="VFD73_25360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77308.1"
                     /translation="MIICQWHLDILYGKQAEAVRIMRAWGAEKLATSEFRRVRSTRLL
                     AGLVGASASHLIDEYTFESMADFDAALAGMAAPQFRTHSDALAPLIVPGSQHWVIFRV
                     LDQS"
     gene            complement(702..1337)
                     /locus_tag="VFD73_25365"
     CDS             complement(702..1337)
                     /locus_tag="VFD73_25365"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HZI77309.1"
                     /translation="MRTSSRRTLEAAAAVLLSVALTAPATAQAPSTRARIGPTVGYLV
                     YGSYFSGPGGLQFSNDNGMAYGGELAVTLGNNIEVVGNVLHATSDWSFQGIPLIGTVN
                     VGGASLWFYDAGVRVRVPVGTSGVSPLVQLTAGAIRYSVDNALLTDRATNFTYSGGLG
                     VEAQLNRRLSILALAKDYLASFRSVDQGAVLGIEGRRSHTLALEIGAGLGF"
     gene            complement(1381..3213)
                     /gene="nagB"
                     /locus_tag="VFD73_25370"
     CDS             complement(1381..3213)
                     /gene="nagB"
                     /locus_tag="VFD73_25370"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004342 - glucosamine-6-phosphate
                     deaminase activity [Evidence IEA];
                     GO_process: GO:0006046 - N-acetylglucosamine catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HZI77310.1"
                     /translation="MTLERIPTVIVDDHDALGRLVARRIADAMRAARKPIVLGLATGS
                     TPIGVYRELIRLHREEGLSFADVVTFNLDEYYPMDPASIHSYHRFMWENLFSEIDIRP
                     ENVHLPRGDLPRECVPEECARYEHAIRAAGGIDLQLLGIGRTGHIGFNEPGSGAESRT
                     RLVTLDLVTRKDTAADFFGEENVPREAITMGVQTIFEAREILILATGEHKAEIVRRAV
                     EGEVDHEIAATFLQRHPNTTFYLDGPAAASLTRIVTPWVVGSVEWTPALVVRAVVWLS
                     QQTGKAILKLTQHDYAEHRLSALVARYGSPGALNGEVFNALGAKIRGKSKLPRNTRII
                     CFSPHPDDDVISMGGILHKLAANGNDITVAYMTSGNIAVFDHDVQRHLDFIVRLATEH
                     HLPAAPATELQRRVSDFLARKRPGDVDAPEVQDTKRLIRESEAVAGIRTLGLSERSAR
                     FLDLPFYQTGKVRKDPIGPADVAIVLQLLNEIQPELVFVAGDLSDPHGTHRVCKEAIA
                     LALDLYAADGRRRPEVWLYRGAWQEWPITEATWLVPLSQEELRLKIQAIFKHQSQKDT
                     APFPGPDEREFWQRVEARNKGTAAELDRLGLAEYFAMEAYVVEP"
     gene            3392..3814
                     /locus_tag="VFD73_25375"
     CDS             3392..3814
                     /locus_tag="VFD73_25375"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZI77311.1"
                     /translation="MEPRLSFVTLGVSDLGRATRFYADGLRLQQLKSLPTVSFFDLGG
                     VRLALYPRHLLEAETGVAPDDARPSGFALGYNVGSEPEVDRLLSKAERAGGRITKRAS
                     RTDWGGYAGYCADPDGFLWEVVWNPKLSSLARTSDQQL"
     gene            3837..4313
                     /locus_tag="VFD73_25380"
     CDS             3837..4313
                     /locus_tag="VFD73_25380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77312.1"
                     /translation="MKSAEDRETLDQEPALHTAEDASPRELWQASWKLLLLLAILGLL
                     VVPLLRELPVGQSSRIGLLAWMLVALALYWLYAGMGYRPLLLLQLLLFSGAAALLTAK
                     LLLVAIDVHELTVLRYVARAMILVGTGLAGANLGGMLLMLWRRSRQDHPVHRNPRS"
     gene            4323..4754
                     /locus_tag="VFD73_25385"
     CDS             4323..4754
                     /locus_tag="VFD73_25385"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI77313.1"
                     /translation="MRDLPVEFRRDSLVVSTDRSRIDPDAVLALLRTTFWARDMRRDV
                     LVRAIANSVSFVLLDDSALVGFGRAVTDLATYAYWTDVVIAPSHRRRGLGRWLSECML
                     AHPELQGLRRVALLTREAAGLYAAIGFATGPGELIYMELRP"
     gene            4751..5203
                     /locus_tag="VFD73_25390"
     CDS             4751..5203
                     /locus_tag="VFD73_25390"
                     /inference="COORDINATES: protein motif:HMM:NF021495.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2214 family protein"
                     /protein_id="HZI77314.1"
                     /translation="MTLRWMLAAFHLLALGIGLAAVWVRGRSLLAVLDRAGLERVFRA
                     DAVWGIAAVLWIGTGLWRLLGGVEKPTDYYLHNVAFATKMALLVVILLLEIQPMVTLI
                     SWRRRVAAGSPPDTRSAPWLAKISLIQAGIVVLMVFAATAMARGIGER"
     gene            5245..5424
                     /locus_tag="VFD73_25395"
     CDS             5245..5424
                     /locus_tag="VFD73_25395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77315.1"
                     /translation="MSKRDDARIARLAKKNAEKIVPPKRDRATQFDPTLRQRPDEEDE
                     GETKRLFKEMKRREF"
BASE COUNT          966 a         1671 c         1775 g         1041 t
ORIGIN      
        1 ccctctggtg tgatggctgc ggcgtgcgcc ggcgccaagc aggtcgctgg aagtctcacg
       61 ttgggtattc tgccgggcac gagcgaagga gcgggccccg atgtggacgt ggccgtgttt
      121 accgggatgg cagatgcgcg aaacgcgatc aacgtgctct ccagcgatat catcgtggcg
      181 tgcggagtgg aaggacccgg aacaacttcc gaggttgccc ttgcgatcaa ggcaggaaaa
      241 ccggtgattc ttctgggcgc atcgtccgca gcgcgagcgt tcttccggtc cgttggtgag
      301 tggctgcctg cagctgatcc ggaagaagca gttcgactga tcgaacagaa gctcgaggac
      361 acccaatgat catctgccag tggcatctcg atatactcta cggcaagcag gcggaggcgg
      421 tgcggatcat gcgagcgtgg ggcgccgaaa agctcgccac ttccgaattt cgccgggtcc
      481 gcagtacccg cctgcttgcg ggattggtgg gtgcttccgc gtcgcacttg atagatgaat
      541 acactttcga gtcaatggca gacttcgatg ctgcgctggc cggtatggcg gcaccccagt
      601 tccggaccca ttcggatgca ctcgcccctc tgatcgttcc cggctcgcag cactgggtca
      661 tcttccgggt actggaccag agctgaatct tcgaaaccgg tctagaaccc cagacccgct
      721 cctatctcca aggcgagggt gtgcgaccga cgaccttcga tgcccaatac cgcaccctgg
      781 tcgacgctcc ggaatgaagc caggtagtcc ttggccagcg ccagaatgct cagccgccgg
      841 ttgagctgag cctcaacccc gagtcctccc gagtaggtaa agttggtcgc gcgatccgtg
      901 agcagcgcgt tgtcgaccga atatcggatc gctcccgccg tgagttgaac cagaggtgag
      961 acgccgctgg tgccgaccgg aacgcggacc cgaacacctg catcgtagaa ccagagactg
     1021 gcgcctccaa cgttaactgt tccgatcaga ggaatgccct ggaagctcca atccgatgtg
     1081 gcatgcagca cgttgcccac cacctcaata ttgttcccaa gcgtgacggc aagctcgcca
     1141 ccgtaggcca tcccgttgtc gttgctgaac tgcaatccac ctggccccga gaaatagctg
     1201 ccatagacca ggtatccgac ggtgggaccg atccgcgcgc gagttgatgg agcctgagca
     1261 gtggcgggag ccgtgagggc gacgctcaac aggacggctg cggcagcttc gagggtacgg
     1321 cgagagcttg tacgcacatc acatcatacg gcaggaggag cgaggccaac gtgaggctga
     1381 tcacggttcc acgacgtagg cctccatggc gaagtattcc gccaagccga gtcggtccag
     1441 ctccgctgca gtccccttgt tccgcgcctc tacccgttgc cagaactccc gctcgtcggg
     1501 accgggaaaa ggtgcggtgt ctttctgcga ttggtgcttg aagatcgcct ggatcttgag
     1561 gcgcagctcc tcctgagaca gcggcaccag ccaggtcgcc tcggtgatcg gccactcctg
     1621 ccaggctccg cgatacagcc atacctccgg ccgtcggcgc ccgtcggcgg cgtacagatc
     1681 gagcgcgaga gcaattgcct ctttgcagac ccgatgcgtg ccgtggggat ccgaaaggtc
     1741 cccggcaacg aataccagct cgggctggat ctcgttgagc agctggagca cgatcgcaac
     1801 atcggccggc ccgatcggat ccttgcgcac cttccccgtc tggtagaatg gaagatccag
     1861 aaaccgggcc gagcgctccg acaggccaag tgtccggatc ccggccaccg cctctgactc
     1921 acggatcagc cgcttggtgt cctgcacctc gggagcatcc acatcacccg gacgtttgcg
     1981 ggcgagaaaa tcacttaccc ggcgctgcag ctcggtcgcc ggtgcggcgg gtaggtggtg
     2041 ctcggtagca agacgtacga tgaaatcgag gtgccgctgc acatcgtggt cgaacacggc
     2101 aatgttgccg ctggtcatgt aggccacggt gatgtcgttg ccgttggcgg caagcttatg
     2161 aagtatcccg cccatcgaga tgacgtcatc atccgggtgc ggggagaagc agataatccg
     2221 ggtattgcgg ggcagcttgg atttgccccg gatcttggcg cccagtgcgt tgaagacctc
     2281 gccgttcaac gctcccggag atccgtaccg cgccaccaag gccgagagcc ggtgctccgc
     2341 ataatcgtgc tgggtcagct tgagaatggc cttgccggtc tgctgggaga gccagacgac
     2401 ggcacgcacc accagagcgg gagtccactc gacggagcca acgacccacg gtgtgacgat
     2461 cctggtcagc gaggcagccg ccggtccatc gagatagaac gtcgtattgg ggtgacgctg
     2521 caggaacgtt gccgcgatct cgtggtccac ctcgccctcg acggcgcggc gcacaatctc
     2581 ggccttgtgc tcgccggtgg cgaggatcag gatctcgcga gcctcgaaaa tcgtttgcac
     2641 gcccatcgtg atggcttcac gaggaacgtt ctcttccccg aagaagtcgg cggccgtgtc
     2701 cttgcgcgta accaggtcga gcgtgaccag ccgggttcga ctttcggcgc ctgacccggg
     2761 ttcgttgaag ccgatgtgtc cggtacgtcc gattcccaat agctggagat cgatcccacc
     2821 ggccgcccgg attgcgtgct cgtagcgcgc gcattcttcc ggcacacact cgcggggcag
     2881 gtctccgcgg ggtaggtgga cattctccgg ccggatgtcg atctcactga acagattctc
     2941 ccacatgaac cggtggtagg agtgaatgct cgcggggtcc atcgggtaat actcgtcgag
     3001 attgaacgtc acgacgtcgg caaagctcaa cccttcctcc cggtggagcc ggatcagctc
     3061 gcgatagacg ccaatcggag tcgagccggt ggcgaggccc agcacgatcg gcttcctggc
     3121 agcacgcatg gcatcggcaa tccgacgagc gaccagtcgg cccagtgcat catggtcgtc
     3181 gacgattacc gttgggatgc gctcgagcgt catgagccag gtgagttgat gtgtcgggtc
     3241 aatcgggaca attttggggc atcgcgaacc cggtccgcag caatccatgg gccagagcga
     3301 cagggctcgt cctggggtgg ggtcagggcg atcggctggc cgggtctgcc gccggcaggt
     3361 gccttagccg tctgcgggac ggagggttat cgtggagccc cgactcagct tcgtgacctt
     3421 gggagtgagc gacctgggca gggcgacccg tttctatgcc gacgggcttc ggctccaaca
     3481 actcaaatcg cttccaaccg tctcattctt cgacctcggc ggcgtccggc tggcgctgta
     3541 ccctcgccac ctgctcgagg ctgagacggg cgttgctccg gatgatgctc gaccatccgg
     3601 cttcgcattg gggtacaatg tgggcagcga gcctgaggtg gaccggctgc tgagcaaggc
     3661 ggagcgggcg ggcggacgca tcaccaagcg tgcctcgcgc accgactggg gtgggtacgc
     3721 cggctattgt gccgacccgg atgggttctt gtgggaagtc gtctggaacc caaagttatc
     3781 gtcgttggcc agaacgtccg atcaacagct gtgagcactg gaggtccgcc gttcgaatga
     3841 aatcagccga ggatcgcgaa actctcgatc aagaaccggc gttgcatacg gcggaagacg
     3901 catctccccg tgagctctgg caggccagct ggaagctgct cctcctgctg gccatcctcg
     3961 ggttgctggt cgtgccgctg ctgcgggagc ttccggtggg acaaagctcc cggatcgggc
     4021 tgttggcgtg gatgctggtg gcactcgcgc tctattggct ctacgccggg atggggtatc
     4081 gcccgctgct gctgctgcag ctactgctct tctcgggggc cgcggcactc ctcacggcaa
     4141 aactcctgtt ggtagccatc gatgtgcatg agctcacggt gctccgctac gtggcgcgag
     4201 cgatgattct ggtcggtacc ggattagcgg gggcgaatct cggagggatg ctgctcatgc
     4261 tctggcgccg gtcccgacag gatcacccgg ttcaccgaaa cccgaggtca tgaccggcgt
     4321 agatgcgtga tcttccggtc gagttccggc gtgactccct ggtggtgtcc accgaccgca
     4381 gccggatcga ccccgacgcc gtcctcgcat tactccgcac caccttctgg gcccgcgaca
     4441 tgaggcggga tgtgctggtc cgggccatcg ccaactccgt cagtttcgtt ctcctggacg
     4501 acagcgctct ggtgggcttt ggccgggcgg tcaccgacct cgcaacctac gcctattgga
     4561 ccgacgtagt gattgccccg agtcaccggc gccgcggtct gggacgctgg ctctccgaat
     4621 gcatgctcgc ccatcccgag ctgcagggac tcagaagggt ggccttgctg acccgggagg
     4681 cggctggact gtacgcggcg atcggcttcg ccactggacc gggtgagctg atttacatgg
     4741 agctccgccc gtgacgctac gctggatgct cgcggccttc catctcctcg ccctcgggat
     4801 cggcctcgcg gccgtttggg tccgtggaag atcgctcctg gcggttctcg atcgggctgg
     4861 cctggagcgg gtgtttcgag ctgacgcagt gtggggcatc gcggccgtgc tctggattgg
     4921 caccggactc tggcgactgc tcggtggagt ggagaagccc accgactatt atctccacaa
     4981 cgtcgccttt gcaacgaaaa tggcgctgct ggtcgtgatc ttgctgttgg aaatccagcc
     5041 gatggttacg ttgatcagtt ggcgtcggcg ggtggccgcc gggtcccctc ccgacacccg
     5101 gtcggcgccg tggctggcaa agatcagtct gatccaggcg ggcattgtcg tcctgatggt
     5161 gttcgcggct acagcaatgg cgcgtggaat tggggagcgt tgatcgacca cggccccgca
     5221 gccgtttaac ctcgaggagg tgtgatgtcc aagcgcgatg acgctcgaat tgccaggctg
     5281 gccaagaaga atgcggagaa gatcgttccg cccaagcggg atcgggccac gcaattcgac
     5341 cccacgctgc ggcaacggcc tgatgaagag gacgaggggg agaccaaacg tttgttcaag
     5401 gaaatgaagc gccgggaatt ttgacgtccg ctatggccca gccccggcgc cgg
//
LOCUS       DASRPQ010002245         1015 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2446706, whole genome shotgun sequence.
ACCESSION   DASRPQ010002245 DASRPQ010000000
VERSION     DASRPQ010002245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2446706"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..593)
                     /locus_tag="VFD73_25400"
     CDS             complement(<1..593)
                     /locus_tag="VFD73_25400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77316.1"
                     /translation="MATTGAGMKSFIDLHGDSIAGVINTFDRMIFKGHFNSFFPEGAF
                     GRYLSRRGILLKDAAGFFEAETQRIRDHVVSLAAAAGRPVEYLAGASTHRSGPCKEAR
                     ARAIAERDGVSEGLVCVLSVLEPCRSFTVAGNRETKRLEVVHRPRKCLHCYLYLIDPE
                     FGWMHVRLQTWAPYEIQVYVNGREWLARQLEAAGIGYR"
     gene            724..972
                     /locus_tag="VFD73_25405"
     CDS             724..972
                     /locus_tag="VFD73_25405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77317.1"
                     /translation="MVASEDGSRQVIEPMLACSAQVSLPAPLAVVVAIAADSSATALG
                     ADNAFRPSELTNDFIELRFIEQVRQLDQIRHGSHSLPE"
BASE COUNT          185 a          344 c          295 g          191 t
ORIGIN      
        1 cggtacccga tcccggccgc ctcgagctgg cgcgccagcc actcgcggcc gttgacgtag
       61 acctggatct cgtagggtgc ccaggtctgc agccgcacgt gcatccatcc gaactcggga
      121 tcgatcaggt acaggtaaca gtgcaggcac ttgcgcggcc ggtggaccac ttccagtcgc
      181 ttggtttccc ggttgccggc caccgtgaac gaccggcacg gctccaggac cgacagcacg
      241 cagaccaagc cctcgctcac cccgtcccgc tcggcgatcg cccgggcccg cgcttccttg
      301 caggggcccg agcggtgcgt gctggcgccc gccaggtact cgaccggtcg ccccgccgcc
      361 gctgcaagcg acacgacatg atcccggatc cgctgcgttt cggcctcaaa gaacccagcg
      421 gcatccttga gcagaatccc ccgccgcgac aggtagcggc cgaacgcccc ctcggggaag
      481 aagctgttga aatgcccctt gaagatcatc cggtcgaacg tgttgatcac gcccgcgatt
      541 gagtcgccat gcagatcgat gaaactcttc atgcctgccc cggtggtcgc cacggtggtt
      601 cagctgcccg tcaggttgga gatcctggct ctgcgagtca aatccggatc atctcgggat
      661 agccgccttt ggttgcggcc gcaggctgcg ctatgagcat aacatccaag tcgagaccgg
      721 ctgatggtgg ccagcgagga cggttcccgt caggtcatcg aaccgatgct tgcatgttct
      781 gcacaagtat ctttgccagc tccgctcgcg gtcgtcgtgg ccattgcggc cgactcctct
      841 gccactgcat tgggggcaga caacgccttc cggccatctg agttgacgaa tgacttcata
      901 gaacttcgct tcatcgagca ggttcgtcaa cttgatcaga tccgccatgg ctctcactcc
      961 cttccggaat gagagcaacc aacagagacg ttggtgcata attcgccgaa aaccc
//
LOCUS       DASRPQ010002246         1190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3076619, whole genome shotgun sequence.
ACCESSION   DASRPQ010002246 DASRPQ010000000
VERSION     DASRPQ010002246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3076619"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..213
                     /locus_tag="VFD73_25410"
     CDS             <1..213
                     /locus_tag="VFD73_25410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77318.1"
                     /translation="IPIVPELGQSGAPVILTGIGLPDDGLHSPNEKLDLSQLWDGIRI
                     FGSFFELMASRIYSSSSGETRLTGPE"
     gene            complement(168..722)
                     /locus_tag="VFD73_25415"
     CDS             complement(168..722)
                     /locus_tag="VFD73_25415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77319.1"
                     /translation="MADSTRRQSPEAQADQRIREILRAADSWSREAPRALMPPIRAVC
                     IRLAEMVADQRHYLAPLPEPQESERRAVLSLVADRLRSQPIIEGVEQHLRELEELELR
                     STGSWAVVASAQTEWITTAIRYLESCASRLPAGERPDPYWADDVVAGVIASVRALIGV
                     DELHARTEARYSGPVKRVSPEDEE"
     gene            complement(776..>1190)
                     /gene="lipB"
                     /locus_tag="VFD73_25420"
     CDS             complement(776..>1190)
                     /gene="lipB"
                     /locus_tag="VFD73_25420"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: protein motif:HMM:TIGR00214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016979 - lipoate-protein ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HZI77320.1"
                     /translation="QLVGYPILDLTQHRPDLHWYLRSLEASMVQSLSAFDIDAGTRPG
                     LTGVWTQGRKIASIGVHVKRWITFHGFALNVTTDLAYFDLIVPCGIRGVVMTSIAAEL
                     GAGEIPGLEKQATRAVIAGFSRIFDFEPIEAAVPA"
BASE COUNT          234 a          376 c          370 g          210 t
ORIGIN      
        1 attcctatcg ttcctgagct tggtcagagc ggggcaccgg tcatcctgac cgggatcggg
       61 ctacccgatg acggcctgca ctcgccgaac gagaagctgg atctctcgca actgtgggat
      121 ggaatccgga ttttcggcag ctttttcgag ctgatggcct cgagaatcta ttcctcatcc
      181 tcgggtgaga ctcgcttgac cggcccggaa taacgtgcct ctgtccgcgc gtgcagctca
      241 tctactccaa ttaacgcgcg caccgacgcg atgaccccag cgaccacatc gtccgcccaa
      301 taggggtcgg gtcgttcccc ggcaggtaga cgggaagcgc agctttccag gtaccgaatc
      361 gctgtggtga tccactccgt ttgcgcggac gccacgacgg cccacgaccc ggtcgaccgc
      421 aactccaatt cctccaattc cctgagatgc tgctccactc cttcgatgat gggttgggag
      481 cgcagccggt cggccaccag cgagagcact gcacgccgct cggattcctg aggctcgggc
      541 aggggggcga ggtagtgccg ctggtccgcg accatctcag ccaaacggat gcagacggcg
      601 cggataggtg gcatgagggc acggggcgcc tcacgggacc agctgtccgc cgcacgaagg
      661 atttcccgga tccgctggtc agcctgggcc tcaggggact ggcgcctggt cgagtcggcc
      721 atgacaggga gaaaaaccga atagtcccac aaaggcaacc ggggcgggaa ccggtctagg
      781 cgggtacggc agcctctatg ggctcgaaat cgaagatcct cgaaaatcca gcaatcacgg
      841 cccgggtagc ctgtttttca agccccggga tctctcccgc tcccagctct gctgcgatgc
      901 tggtcatgac gaccccgcga atgccgcagg gcacaatgag gtcgaaatag gcaagatcgg
      961 tcgtcacgtt caacgcgaag ccgtgaaagg tgatccaacg cttcacgtgg actccgatgc
     1021 tggcaatctt gcgcccctgg gtccaaacgc cggtcagccc gggccgagtg ccggcatcga
     1081 tgtcgaaggc ggacagggac tgcaccatcg aggcctccag actccgcaag taccagtgca
     1141 gatcgggccg atgctgggtg agatccagga tcgggtatcc caccagctgt
//
LOCUS       DASRPQ010002247         1039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_886461, whole genome shotgun sequence.
ACCESSION   DASRPQ010002247 DASRPQ010000000
VERSION     DASRPQ010002247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_886461"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..489)
                     /locus_tag="VFD73_25425"
     CDS             complement(<1..489)
                     /locus_tag="VFD73_25425"
                     /inference="COORDINATES: protein motif:HMM:NF014732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /protein_id="HZI77321.1"
                     /translation="MTRSQSQRPSSSTEQVIQLDFRALYYSLRQRAWLVALCLAVAGA
                     GAFAYLKRAPKIFEAQVVLQVEQEEQKVLNIEQVQGENLQALELVKTIEQTLQNRALL
                     ERVFTALKLGENPKFNPPGPEPRPGRDELLKGLGEMISVKLRRGTRLIDMKVEHTDAA
                     LTA"
     gene            791..>1039
                     /locus_tag="VFD73_25430"
     CDS             791..>1039
                     /locus_tag="VFD73_25430"
                     /inference="COORDINATES: protein motif:HMM:NF012589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY family carbohydrate kinase"
                     /protein_id="HZI77322.1"
                     /translation="MRTLIIGIDSGTQSTKVLVIDARNGKVVGSASRTYDLIPDLPPG
                     AKEQHPHLWRDAAGAALRQALRDAKASPADVRAIGVSGQ"
BASE COUNT          175 a          341 c          332 g          191 t
ORIGIN      
        1 ggcggtcaag gctgcgtcgg tatgctccac tttcatgtcg atcagccggg tgccccggcg
       61 gagcttgacc gagatcattt cccccaggcc cttgagcagt tcgtcccggc ccggccgggg
      121 ctcggggccg ggcggattga acttcgggtt ttcccccagc ttcagcgcgg tgaagacgcg
      181 ctccagcagg gcgcgatttt gaagcgtttg ctcgatggtc ttgaccagtt cgagggcctg
      241 caaattctcg ccctggacct gctcgatatt cagcactttc tgctcctcct gctcgacctg
      301 aagcaccact tgagcttcaa agatcttcgg ggcgcgtttt agataggcaa aggcccccgc
      361 gcccgccacg gcgaggcaga gggccaccag ccaggcccgc tggcgcagcg agtaatagag
      421 ggcgcgaaaa tccagctgga ttacctgttc cgttgaggac gaggggcgtt gagattgcga
      481 tcgggtcata acctggttct gcacagcgct gtcttagcag gcctcgggcc gaggatggct
      541 ccactgccat caagaccggt ttgttcggga aaccggaggt tcgtctcagc gcaggccggg
      601 aatttcttgc cgggaacaac ctgcccggtc cggatcgcag gccccatggg cgtcgcgccc
      661 agtcggggcc ggtgatgctt cggcaggccg ttcgtcatgc gagcgctggt ctagccagaa
      721 ccaggccaac tgcggggttc aggatggaca ggtccacttc ggccggtatc cttcgggcac
      781 ttttcggacc atgagaacac ttatcatcgg catcgacagc ggcacgcaat ccaccaaggt
      841 gctggtcatc gacgcccgca atggcaaggt ggtgggcagc gcgtcgcgca cctacgatct
      901 gatccccgac ctcccgcccg gcgccaagga gcagcatccc cacctttggc gggatgccgc
      961 cggcgccgcc cttcgccagg cgctccgcga cgccaaggcc agccccgccg acgtccgcgc
     1021 catcggggtc agcggccag
//
LOCUS       DASRPQ010002248         3442 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3431316, whole genome shotgun sequence.
ACCESSION   DASRPQ010002248 DASRPQ010000000
VERSION     DASRPQ010002248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3442
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3431316"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..417)
                     /locus_tag="VFD73_25435"
     CDS             complement(<1..417)
                     /locus_tag="VFD73_25435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77323.1"
                     /translation="MTERLFAFRWDVDHRVCATDGLPRIRAVCRDFGVPNTFFINMGR
                     STNLLEWIGPGTARSKAKLADRDAVHLIKKTGWPRFILETALARPVGLSFVPLLQAMQ
                     AEGHELGLHGGMDHVVWSRRFHELPEAVLRADVEKSY"
     gene            complement(414..1634)
                     /locus_tag="VFD73_25440"
     CDS             complement(414..1634)
                     /locus_tag="VFD73_25440"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI77324.1"
                     /translation="MRIICPTYWYPQHANDTQATYVHDINRHLVRRGHSVTVVTPGDR
                     SLPRSDMFDGVRIVRFPLELPPDLTYGRVAQSRVSWLGKFARVVVMAHYMEAQHRAIL
                     AEARENGGDVIHAHWAIPTGPAAVMAARKLGLPSVITMHGGDVYVNPEQGYDFPTRWY
                     VRPALRWTLRHAGALTAITEDCRQHALRAGAPAEHIRLVFNGTDLRRFSPGDNGSRGD
                     ARYGPHMIFACRQLFPRKGIRFLLEAGAALKPQFPDLKIVLAGDGFERPDLARLAAEL
                     GIASDVTFLGWVPNVDLPQYYRAAAVSVIPSLEEGFGIPAAEAMGCEIAVVASDAGGL
                     PEVVENGVTGLVVPRGDAQALAQAIGSLLADPERRRQMGQAGRERALRLFDWDRSAQQ
                     FEEIYQEVASRMRR"
     gene            complement(1892..2314)
                     /locus_tag="VFD73_25445"
     CDS             complement(1892..2314)
                     /locus_tag="VFD73_25445"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI77325.1"
                     /translation="MIMPAGSARSKAVVPDRPPGGYTVLVVDDEEAVRRLACRMLTWT
                     GYQALEATHGREAIATIEQHAGGIHLVLTDIKMPGMNGRELGRQVEQRWPGKPVLYMS
                     GFASEVFQGGLLEPGAPFLAKPFTQEDLAAKVRALLGG"
     gene            2677..3348
                     /locus_tag="VFD73_25450"
                     /pseudo
     CDS             2677..3348
                     /locus_tag="VFD73_25450"
                     /inference="COORDINATES: protein motif:HMM:NF025774.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MEDS domain-containing protein"
BASE COUNT          629 a         1123 c         1062 g          628 t
ORIGIN      
        1 atacgacttc tccacgtcgg cgcgcagcac ggcctcgggc agctcatgaa agcggcggct
       61 ccataccacg tggtccatgc cgccatgcaa tccgagctca tgcccctccg cttgcatggc
      121 ctgcagcaga ggaacgaagg agagcccgac cggccgggcc agggcggttt ccagaatgaa
      181 ccgcggccat ccggttttct tgatcaggtg aacggcgtcg cggtcggcga gcttggcttt
      241 cgagcgagca gtgccggggc cgatccactc cagcaggttg gtggagcggc ccatgttgat
      301 gaagaaggtg ttgggaaccc cgaagtcgcg gcagaccgct cggatccgag gcaggccgtc
      361 ggtagcgcag acacgatgat cgacgtccca gcgaaatgca aacagccgct cggtcaccgg
      421 cgcatccggc tggcgacttc ttggtagatc tcctcgaact gctgcgccga acgatcccag
      481 tcgaacaacc ggagcgcccg ctcccggccg gcctgcccca tctgccggcg ccgctcaggg
      541 tcggccagga gggagccgat cgcttgcgcc agcgcttgag cgtcgccccg ggggaccacc
      601 agcccggtca cgccgttctc gaccacttcc ggcaaacccc cagcgtcgct ggcaacgacg
      661 gcgatctcac accccatcgc ctcggctgcg ggaattccaa atccctcttc cagtgacggg
      721 atgaccgaca cggcagcggc ccggtagtac tgcggaagat cgacgttggg aacccacccc
      781 aggaaggtga catccgatgc gatgccgagc tcggcggcca gtcgtgccag atccggccgc
      841 tcgaagccat cgcccgcgag cacgatcttg agatcgggga actgcggttt aagcgcggca
      901 ccggcttcca gaagaaaacg gatgcccttg cgcggaaaga gttgccggca ggcgaagatc
      961 atgtggggac cgtagcgggc atctccgcgg ctcccgttgt cgccggggct gaacctccgc
     1021 agatcggttc cattgaacac caaacgaatg tgttccgccg gcgcacccgc tctcagggcg
     1081 tgctgccggc agtcctcggt gatggccgtg agcgctccgg cgtgccgcaa cgtccagcgc
     1141 aacgcgggcc tgacatacca ccgggtcgga aaatcgtagc cctgctccgg attcacatac
     1201 acatcaccgc cgtgcatcgt gatcacgctg ggcaggccga gcttgcgcgc agccatcacg
     1261 gccgccggcc ccgtcggaat cgcccagtga gcatgaatca catcaccgcc gttctcgcgg
     1321 gcttccgcca ggatcgcgcg atgctgagct tccatgtaat gggccatgac gacgacgcgg
     1381 gcaaatttgc ccagccagct cacccggctc tgggccactc ggccataggt cagatcggga
     1441 ggaagctcaa gtggaaatct gacgatccgg acaccgtcga acatgtccga tcgggggagc
     1501 gagcggtccc ccggggtgac gacggtgacc gagtggcccc ggcgcacaag atgccggttt
     1561 atatcgtgaa cgtaggtggc ctgagtgtca ttggcgtgct gcggatacca ataggtggga
     1621 caaatgatgc gcaacggagt ttcccgcccc ctcggtcgca cagggggcat ctccggcgcc
     1681 gcaacaacta atccccctgc tgtcatagcc tgttcatttt cacgggtatt gaactgatct
     1741 ctaaaggcta gaagaacggc ctccgaagat caacatttgt gccaccttca ggccacacta
     1801 tggcgtgatt tagccaggca gggacagaac ttgcagaact gtcgcaacag aatctgctgc
     1861 ccccacgctg cggccagcca ctccctccct cctagcctcc gagcagagct cgcaccttgg
     1921 cagccaaatc ctcctgggta aacggctttg ccaggaaggg tgcgccgggc tctaacagtc
     1981 ctccctggaa tacctcagag gcaaagccgg acatgtagag caccggcttg ccaggccagc
     2041 gctgttccac ctgacgcccc agttcgcggc cgttcattcc cggcattttg atatcggtca
     2101 agaccaggtg gattccgccg gcatgttgtt cgatggtggc aatggcttct cggccatggg
     2161 ttgcctccag agcctgatag ccggtccagg tcagcatacg gcaagcgagc cgacgcactg
     2221 cctcttcgtc atcgaccacc aggaccgtgt agccgccagg cggccggtcc gggaccactg
     2281 ctttgctccg cgccgagcct gccggcatga tcatggggcg aaactaccct tcggccgctg
     2341 gccgccgcaa gctccgattg cgatctgcag caccgggtca ccgtgatctg acgcacgagc
     2401 cgcaacgctg ccgggtggta tactcccgcc gtgagaatgc agggcctcgt cgcttccacg
     2461 ttgcaattcc cgctcgctgc cgctagtgtc cggaccggtg gtaggttgtg cttcaactct
     2521 gccactcccg actcccttac gagatccgct gatgtcctcc tgtcctgagc tcctggacca
     2581 tccacaggcc gaacagcatg tggtgcagct gtacggcagt gatgatcgtc tgctcagccg
     2641 gaacgtcggc cgttacctgg aggaggactc aaacgcggcg atggactcat cgtcatcgcc
     2701 actccggcgc atcgaaccag ctttgctcat cacctcacgg gtcaggccgg gtatccggca
     2761 gcgatcctgg aaggaagact ggtgttcctg gatgcggccg ccacgctggg ccgtcttatg
     2821 gtgcagggaa tgcctgatcc cgagttgttc gatcaggttg tcggtgagac gctgcgcaat
     2881 gtccggcgga actcgggaca caccggtctt cgagcttacg gggaaatggt cgggctcctg
     2941 tggactgccg gcaaccacgc cggtgccgtc cggctggagg agctctggaa tcagctgcta
     3001 aaagggagcg acgtcagtct gttctgcgcg tatccggtcg atgtgttcgg ttctgatttc
     3061 cagatcgacg ctgtggatcc ggtgttatgt tcgcacacgc acctgctgcc ggtcgatccc
     3121 gcactccagg aagccttgga tcgtgccatg aatgaggtgc tgggcgcgcg ggctgaggac
     3181 atccggagtt tgatccgtgc aaaccatcgc cccgcctggg gcaccattcc tcccgccgaa
     3241 tcgatggtcc tctggctgcg gaacaacctt cccggttctg ctccagcaat tctgcagctc
     3301 gcccgcacgt actacgacag cctcccggag agcgctgcaa gccgctgatc gccgccggtg
     3361 cggggcttgc ctaagccagg tgagcccgcg aatttcctgc gcgttggagt ggtggccgag
     3421 tggctgaagg caccggtttg ct
//
LOCUS       DASRPQ010002249         1090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3732491, whole genome shotgun sequence.
ACCESSION   DASRPQ010002249 DASRPQ010000000
VERSION     DASRPQ010002249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3732491"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1020
                     /locus_tag="VFD73_25455"
     CDS             <1..1020
                     /locus_tag="VFD73_25455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77326.1"
                     /translation="WTTLSAAMGFSTTRIVFPVPAAELAASYHFEISAPPEVSIVRAV
                     LLAGRPKPEAKKPAPPAAGQVNGSAMMKDRQRRRPSFDSIGGGYPTVDLHVAGVPYGS
                     RSRVQVEVEARVGGWFATAVFASWLASAILLFAYLARPKLDVGSALLVSFSAGLAALL
                     VRNDPHRLVTRLLSKVRLLAMFAALLALAAAAVLAFGRPQAAHHWLLGLFIASIVPTA
                     LISLSWLLALRRYLRNDPRESPWEHHRPRRSKTTSQDPEQAAHLADETRHETLARKFE
                     NARCPYDLAHEKLGFNRPAIRVASCESDRQTYPWNKEFADSFHRRLDKYLVAVATQKP
                     GSDRP"
BASE COUNT          188 a          369 c          301 g          232 t
ORIGIN      
        1 tggacgacac tgtctgcggc gatggggttt tctactacac ggatagtttt tccggtgccg
       61 gcggcggaac tcgccgctag ctaccacttc gaaatttcgg ctccccctga agtgtcgata
      121 gtcagagcgg tgctcctggc gggacgcccc aagcccgaag ctaagaagcc agcaccccct
      181 gcagccggac aggttaatgg ctccgccatg atgaaggatc gccagaggag acgtccgtct
      241 ttcgattcga ttggcggcgg ctaccccacc gtggaccttc atgttgccgg cgttccatac
      301 ggttccaggt cacgggtcca ggtagaggtc gaagcgcgtg tgggtggctg gtttgccacc
      361 gcagtcttcg catcctggct tgcctcagcc attctgttgt tcgcctatct ggcaagaccc
      421 aaactcgatg ttggctctgc tcttctagtg tccttctctg ccggacttgc cgcgctgctg
      481 gttcgcaatg acccgcatag gctcgtaacc agactcctgt ccaaggtgcg cctgctcgcg
      541 atgttcgccg ccctgctagc gcttgccgct gccgcggtac tggcgtttgg ccgcccgcag
      601 gccgcgcatc actggctcct cggattgttc atcgcgagca tcgtccccac cgcgctcatc
      661 tccttgtcct ggctcctcgc cctgaggcgt taccttcgaa acgacccccg agagtcacca
      721 tgggagcacc acaggccacg gagaagcaaa actacgtcac aggatcccga gcaggcggca
      781 cacctagcgg acgagactcg tcatgagacg ctggcaagga aatttgagaa tgcccgctgt
      841 ccttacgacc tggcgcacga gaagctcggc tttaaccggc ctgccattcg cgtagcctcc
      901 tgtgagagcg atcggcagac ctatccctgg aacaaggaat tcgctgactc cttccatcgc
      961 cgccttgaca aatatctcgt tgccgtcgca actcaaaagc ccggctctga taggccctga
     1021 tgccggttct tcagttcccg cgcccggacc ctgcgttacc cggcccctcc cgcgcgccag
     1081 cctctccgtc
//
LOCUS       DASRPQ010002250         1464 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1536380, whole genome shotgun sequence.
ACCESSION   DASRPQ010002250 DASRPQ010000000
VERSION     DASRPQ010002250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1464
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1536380"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..361
                     /locus_tag="VFD73_25460"
     CDS             <1..361
                     /locus_tag="VFD73_25460"
                     /inference="COORDINATES: protein motif:HMM:NF019341.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77327.1"
                     /translation="YADSARIALEGQLKSTPGDAQRRVFLGMTLAYLGRKADALREAE
                     RGAALLPPQRDAYVGTYLQHQLARVYLLAGEPDKALDLLEQLLRRPYYLSPRWLRIDP
                     TFTPLHGNPRFERLAGY"
     gene            657..>1464
                     /locus_tag="VFD73_25465"
     CDS             657..>1464
                     /locus_tag="VFD73_25465"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HZI77328.1"
                     /translation="MQLRGWAIQAVVGTLLATSMEAQAVDWPAYGRDLQGTRYLPADE
                     ITRENVKQLVVAWTYRTGETERRFATAKPTSFETTPLVIQGVMYVGTPLGRVIALDAA
                     TGRERWTFDPNIKRDVKYGDFASRGVSAWLDPEAREGSPCSRRVFIANPQSQLYALDA
                     ASGHPCRDFGEGHGRPEARTPDSSVRGRGLLHELSTAGDERLGHHRLFNRGQQPSGPG
                     ERRSAGLRCADGSAHVELGSHPSGSRRSGVWRVARNAGPQEWWGQRLVGSG"
BASE COUNT          256 a          472 c          481 g          255 t
ORIGIN      
        1 ctacgccgat tcggcgcgca tcgccctgga ggggcagctc aagagtacgc caggggatgc
       61 ccagcgccgg gtgtttctgg ggatgaccct ggcctacctc ggacggaagg ctgacgcgct
      121 ccgcgaggcc gagcggggcg cggcgctgtt accgccgcag cgggatgcct atgtgggcac
      181 atatctccag caccagcttg cgcgcgtcta tttgttggca ggcgaaccgg acaaggcgct
      241 cgacctgctg gagcagttgc tccggaggcc ctactacctg tcaccccggt ggcttcggat
      301 cgatcccacc ttcacgccgc ttcacggcaa cccacggttc gaaaggctcg caggttactg
      361 agaagaagca aagcgatcgg gataacggtc acgacgactc ggcttattga agacatcgct
      421 ggcttcctcg aatcgggagt tgaaagaccc cccgactggg gaatggctct tggtcactcg
      481 ggaccgcaag ttgtggtcgc tcgaggatgc gaagcggagc tggtgccggc ttcccaatcg
      541 cgtgcatccg gtcgctgata tggcgtgccc tacgccaacg gcaatcagcg gcactgcgac
      601 accagctcct cctctccgcc cgtattacct tccgccgaaa ccatcgggag atccgaatgc
      661 agctccgcgg ctgggcaatc caggcggtgg ttgggactct tcttgccacc agcatggagg
      721 cgcaggcggt cgactggccg gcctatgggc gagatttgca gggcacgcgc tatctcccgg
      781 cagacgagat cacgcgggag aacgtgaagc agctcgtcgt agcgtggacc tatcgcaccg
      841 gcgaaactga gcgacgattt gccaccgcca agccgacctc gttcgagacg actccgctgg
      901 tcatccaagg cgtcatgtac gtcggaacac cgctcggacg ggtgatcgct ttggatgccg
      961 ccactggccg ggaacgctgg accttcgatc cgaacatcaa gcgcgacgtc aagtacggcg
     1021 actttgccag ccgcggcgtg tccgcctggt tggatcccga agcgcgggag ggttcgccct
     1081 gctcgcgccg agttttcatc gccaacccgc aatcgcagct gtacgcgctc gatgccgcga
     1141 gcggccatcc ctgccgagac tttggagagg ggcatggtcg acctgaagcg cggactccgg
     1201 attcgtccgt tcgaggccgc ggcctactcc atgagctctc caccgctggt gatgaacggc
     1261 ttggtcatca ccggctcttc aatcgcggac aacagccgtc cggccccggc gagcggcgaa
     1321 gtgcgggcct acgatgcgcg gacgggagcg ctcacgtgga gctgggatcc catccctcag
     1381 gatcccgccg atccggcgta tggcgggtgg cgcggaacgc tgggccccag gagtggtggg
     1441 gccaacgcct ggtcggttct ggcc
//
LOCUS       DASRPQ010002251         4842 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2447608, whole genome shotgun sequence.
ACCESSION   DASRPQ010002251 DASRPQ010000000
VERSION     DASRPQ010002251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4842
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2447608"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..803)
                     /locus_tag="VFD73_25470"
     CDS             complement(<1..803)
                     /locus_tag="VFD73_25470"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HZI77329.1"
                     /translation="MGKVLQDVTLHWSAATSLVALLALVLGGVSAAVVQERRHASRSA
                     ALQAATTHYQQFLRQVIDTNPNVIFVKDWEGRYVLANAAAAQLYGTTVEALIGKRDAD
                     FNPNMEEVERFLRADRDVMTSQRAVFIPEEPLTGRDAGEPRWFQTVKVPLLGSDGETR
                     QVLGVATEITQRKHLEDQFRQAHKMEAVGRLAGGVAHDFNNLVMIIRGYSDLLLETVS
                     SDARPQVEEIKKAGDRASALTRQLLAFSRKQVLEPQVLDPNQAVRNMVK"
     gene            1080..3899
                     /locus_tag="VFD73_25475"
     CDS             1080..3899
                     /locus_tag="VFD73_25475"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HZI77330.1"
                     /translation="MSNLKSRTGATAYLLAVLAVLAMAGVRWLLAPALGQQVPFTTFL
                     IAVIVVAWARGLGPALCAVVLSTLLGWFLFIPPIYSLQLPNRMEFIRILLFALVGVIA
                     AFLGESRLRAQEHAESAAADARRAADLARAEAARAEEQGSRAEAAAVEAEEALEQQLE
                     VEAALRTSEARFRTMAESSPLGIYLTDPAGDCQYTNPAYQRISGLTKDQALGTGWSRA
                     IHPDDRERVFREWYDAAQRRQPFLSEHRFAHDDGTVVWTRVNAAEILDGEQLVGYVGV
                     VEDITEHATAQAALRQSEERYRAFIEQTTEGVWRFELDEPVPTNLPADEQIDRFYASA
                     YLAECNDVVANMYGFSKAAELVGVRLGDLLPRSEPQNLAFLRAFISSGYRLTDAESHE
                     YDREGKERYFLNNLIGIISDNHLLRAWGSQRDVTASKQAEAAIQASEARFRSVFESGM
                     IGIAFWNGAQMTNANDTLLTMLGYTREDLSEGLLRHGRLTPPGYEEVDRRATEETRDY
                     GSCTPYEKEFLRKDGSRVPVLVGGARLGDTMSDAVFFVLDITARRRAEERLRQAERIE
                     VVGQLAGGMAHEANNQMSVVLGAASFILERQDLPQVVRQDVEYIRQAAERTASITRQL
                     LAFSRRQVLQRAVVNLNSVLQHLEPILKRTLTEEQTLELRLAKDLAPIRTDRSQLDQV
                     LLNLAINARDAMPNGGKLLIETREVELTHTYAAAKSEVSITPGRYTALIVSDTGVGMD
                     PETMKHLFEPFFTTKDVGKGSGLGLAMVYGIVKQSGGYIWAYSEPGMGTTLKLYFPAV
                     VEESSQAAPGVVQEPSRGGGGRILVVEDDPLVREMTRRALVDAGFEVLSAGNGREALA
                     MADDNHIDAVLTDLAMPEIGGRELAARLRESRPDLPVVFISGYTDEIMTRRGLLDSGM
                     SFLEKPVAPEVLTRKLREVLDGRAL"
     gene            4150..4605
                     /locus_tag="VFD73_25480"
     CDS             4150..4605
                     /locus_tag="VFD73_25480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77331.1"
                     /translation="MAVRRAAAVVDRVVEAVAVQVVRAVQVVDRAAGVAVRRAEVAEV
                     AVAGRAVPAAVREEEDRVVVASAVAVGRAAVVVDRAAAVVDRAAVSGAAVDKAVVVAA
                     DGAAVVDRAEAGKPDQQHSTFHIGASLSLRAGRRFFCATPSYPTASGVY"
BASE COUNT          890 a         1427 c         1674 g          851 t
ORIGIN      
        1 atcttcacca tattgcgcac ggcctgattc gggtctaata cctgcggctc caggacctgc
       61 ttacgactaa atgcgagcaa ctggcgtgtg agtgcgctgg cgcgatctcc tgccttcttg
      121 atctcctcaa cctgcgggcg ggcgtctgaa gaaacggtct ccagaagcag atcgctgtag
      181 cccctgataa tcatgacgag gttattgaag tcgtgtgcta cgccgccggc cagccggccg
      241 acggcttcca tcttgtgtgc ctggcggaac tggtcttcca gatgtttgcg ctgggtgatc
      301 tccgtggcca caccgagcac ctgccgggtt tccccatcgg agccgagcag cggcaccttg
      361 accgtttgaa accaacgcgg ttctccggca tcgcgcccag tcagcggctc ctccgggatg
      421 aagaccgccc gttgcgaggt catgacgtcc cggtcggctc ggagaaaccg ctcgacttct
      481 tccatattgg gattgaagtc ggcgtcccgc tttccaatca gcgcttcgac cgtcgtgccg
      541 tagagctggg cagcagccgc gttcgcgagt acgtagcggc cttcccaatc tttcacgaag
      601 atcacattgg gattggtgtc gatgacctgt cgcagaaact gctgatagtg cgtcgtcgcg
      661 gcctggagtg ccgcggagcg ggacgcatgg cggcgctcct ggaccacggc ggcactgacc
      721 ccgcccagga cgagcgccag gagcgccaca agggaggtgg ccgccgacca gtggagagtg
      781 acatcctgca gcaccttgcc cattactccg ccagcattcc tgggagtccc tccgtccggc
      841 gcgccgtcaa tcgcacgggc cgaggcaaca cgcgagagcc tgaatggaaa tcggttgatg
      901 atcggagccg gcgcatccct gaagcaggag ccatgccgat cattcggcga gagaggctat
      961 agatacgaga ctacaaggag actcactgga gatttgtcgc aaatgcgccg ccgaacgacg
     1021 aatttgcgtc acccggctgg tgacttgctc cgctgcagcg gtcgctcctt acttcaggcg
     1081 tgtccaacct gaaatcccgt accggagcga cggcctacct cctggccgtg ctggccgtgc
     1141 tagccatggc gggggtgcgc tggctgctcg ctccggcact gggccagcag gtgcccttca
     1201 caacctttct catcgcggtg atcgtggtgg cctgggccag gggactcggc ccggcgctct
     1261 gtgccgtggt gctcagcacc ctgctgggct ggttcttgtt catccctccg atctactcgc
     1321 tgcagttgcc caaccgtatg gaattcatcc gtatcctgtt gtttgctctg gtcggggtta
     1381 tcgccgcgtt tctcggcgag tcgcgacttc gagcacagga acacgccgaa tccgccgcag
     1441 cggatgcccg acgagcggcg gatctcgcgc gggcggaggc ggcccgggcc gaggaacagg
     1501 ggtccagagc tgaagctgcc gcggtggaag cggaagaggc gctcgagcag cagcttgagg
     1561 tcgaagcggc attgcggacc agcgaagcac gcttccgcac aatggcggag tcatcgccat
     1621 tggggatcta tctcaccgat ccagctggtg attgccagta taccaaccca gcatatcagc
     1681 ggatttccgg tttgaccaaa gaccaggccc tggggaccgg atggagccgg gcgatccatc
     1741 cggacgaccg ggaacgcgtc tttcgcgagt ggtacgacgc tgcgcagcgc aggcagccat
     1801 tcctcagtga gcatcgcttt gcacacgacg atggcaccgt cgtctggacc cgggtgaacg
     1861 cggccgagat cctcgacggc gagcagctgg ttgggtatgt cggtgtggtc gaggatatca
     1921 ccgaacatgc gacggctcag gcggctctgc gccaaagcga ggagcggtac cgtgcgttca
     1981 tcgagcaaac cacggaaggg gtctggcgct tcgagctgga cgaaccggtg cccaccaatc
     2041 tgcccgccga cgagcagatc gatcgcttct atgcttccgc atacttggcc gagtgcaacg
     2101 acgtggtcgc gaacatgtac ggcttcagca aagcggcaga gctggttggt gttcggctgg
     2161 gcgacctgct gcctcgctcg gagccgcaga acctcgcgtt cctgcgggcg ttcatcagca
     2221 gtggctaccg gttgaccgat gcggagtcgc atgagtacga ccgcgaaggc aaggagcggt
     2281 acttcctcaa caacctgatc ggaatcatct ccgacaatca tctcctccgg gcctggggat
     2341 cgcagcgcga tgtcaccgcc agcaaacagg ccgaggctgc gatccaggcc agcgaggccc
     2401 ggttccgcag tgtgttcgag tccggcatga tcggcatcgc gttctggaat ggggcgcaga
     2461 tgaccaacgc gaacgatacg ttgctgacca tgttgggata tacccgcgag gatctcagcg
     2521 aaggtctctt gcggcatggc cgtctgaccc cgcccggcta cgaggaagtg gaccgccggg
     2581 cgaccgaaga gacccgagac tatgggtcgt gtactcccta cgaaaaggaa ttcctgcgca
     2641 aggacggcag ccgggtaccg gtgctggtcg gtggagctcg gttgggggac actatgtccg
     2701 acgccgtgtt cttcgtactc gacatcaccg cgcggcggcg cgcggaagag cggctcaggc
     2761 aggcagagcg catcgaggtc gtggggcaac tcgcgggagg gatggcgcac gaggccaaca
     2821 atcagatgtc cgtggtgctc ggcgccgcca gcttcattct cgagcggcag gatctgcctc
     2881 aggtggtgcg ccaggacgtg gagtacatcc gccaggcagc ggagcgtacc gcatcgatca
     2941 cgcgacagct gctcgccttc agccggcgcc aggtgctgca gcgggcggta gtgaacctga
     3001 attccgtgct gcaacatctt gagccgattc tcaagcgaac cctgacggaa gaacaaacgc
     3061 tggagctgcg actggcaaag gatttggctc cgatccggac ggaccggtca cagctcgacc
     3121 aggtgctcct caatctcgcc atcaacgccc gagacgcgat gccaaacggt ggcaagctgc
     3181 tgatcgagac gcgcgaggtg gagcttaccc acacctatgc ggcagcgaag tcggaggtct
     3241 cgattacgcc aggacgctac accgcgctga tcgtcagcga caccggtgtt ggcatggacc
     3301 ccgaaacgat gaagcatctg ttcgagccgt tcttcaccac gaaagacgtc ggcaagggaa
     3361 gcggtctagg tctggcgatg gtctatggca tcgtgaagca gagtggcgga tacatctggg
     3421 cctacagcga gccggggatg ggcaccacgc tgaagctgta cttccccgcc gtcgtggagg
     3481 aaagcagcca ggcagccccg ggcgtggtgc aggagcccag caggggcggg ggaggccgca
     3541 tcctggtagt ggaagacgat cccctggtcc gggagatgac ccggcgggcc ctggtcgatg
     3601 cagggttcga agtgctcagt gcggggaacg gacgggaggc gcttgctatg gccgacgaca
     3661 accacatcga tgcggtgctc accgatctcg ccatgcctga gatcggcggg cgcgaactgg
     3721 ccgcacggct ccgggaatct cggcccgatc ttccggtggt attcatctcc gggtacaccg
     3781 acgagatcat gacccgtcgc ggactgctcg acagcggaat gtcgtttctg gagaaaccag
     3841 tcgcgcctga ggtgctcacc aggaagttgc gggaggtcct ggatgggcga gcgctgtgag
     3901 caacctcact cccccggaat tgcggcagca acatatattt cctcgccctg tagggccggg
     3961 gctgagagac tccgtgcggg cgtggccgtc ggagtcagga actatccccg aacttaggcc
     4021 gtcgctcccc gcggcggccc tcctcaagga gtcgacgcat ggccaatcgt gaagggggca
     4081 gacctggcgg tggaggcggg ggccagggtg gaggaggtca gaaaggcggc ggaggcggtc
     4141 aaggtggagg tggcggtcag aagggcggcg gcggtggtgg acagggtggt ggaggcggtg
     4201 gccgtccagg tggtccgggc ggtccaggtg gtggacaggg cggcgggggt ggcggtcaga
     4261 agggcggagg tggcggaggt ggcggtggcc ggccgggcgg tcccggcggc ggtcagggag
     4321 gaggaggaca gggtggtggt ggccagcgcg gtggcggtgg gcagggcggc ggtggtggtg
     4381 gacagggcgg cggcggtggt ggacagggcg gcggtcagcg gggcggcggt ggacaaggcg
     4441 gtagtggtgg cggcggatgg ggcggcggtg gtggacaggg cggaggccgg taagccggac
     4501 caacaacact caacgttcca tatcggcgcc tcactctctt tgagagcggg gcgtcgtttt
     4561 ttttgtgcaa ctccttctta cccgacggcc agcggggtat actagtgcct ggcttctcgg
     4621 atcctccact acatagagat ctgctcacac ctgctttcta cggcgggcgg aaacctcgct
     4681 ggaggctcgg atgactggaa aacggggacg cgaaggcaga ctcaagcagg agcacgccgc
     4741 tttgtatcct ggcctgaagc caggcacctg gtttcccgtc gagacattga tccagcaggt
     4801 caccgatctg ctccaccgag accgttccaa ggcagagagc at
//
LOCUS       DASRPQ010002252         1099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4327955, whole genome shotgun sequence.
ACCESSION   DASRPQ010002252 DASRPQ010000000
VERSION     DASRPQ010002252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4327955"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(135..>1099)
                     /locus_tag="VFD73_25485"
     CDS             complement(135..>1099)
                     /locus_tag="VFD73_25485"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HZI77332.1"
                     /translation="CRVWSLDCSEGWAAVFLLLYFRDQPGQGSLMVDVADSTSTAGHN
                     YVLGHTQGELRRLAIQAALIDPITRRIVREGGITEGMRVLDIGSGGGHVAFLVADLVG
                     SAGHVVGVDQSPTAVAAATADAQARSLGNVEFRAGNPAEMVFDRPFDAVVGRFVLQFQ
                     ADPVSMLKNVVRHVWPGGPVVFHELAWSGIWSFPPTPLHDRCCAWAMEAIRRSGTETL
                     MGLKLYSTFVAAGLPEPTMRMEAVIAAGAQAWPMLEQVAGLVESLVPAMERFGVATVE
                     EIGSESLLERLLDEARSAESVIFGRLQVGCWSRAGALAGGSADR"
BASE COUNT          226 a          382 c          320 g          171 t
ORIGIN      
        1 cagcacaaac gtaagaaacg gctggccgca gaccgtgccg gacctacttc gggacgaaga
       61 ggtcgtgggt atcccgcaca cgacgccgag tagcactgga tccggacggc ggccgaggtg
      121 cgcgaggacg tgtatcagcg atccgcgcta cctcccgcca gcgctccggc tcgcgaccag
      181 caaccgacct gtaggcggcc gaagatgacg ctctctgctg agcgcgcctc atccaagagc
      241 cgctccagga gtgattccga gccgatctcc tcaacggtgg ccaccccaaa acgttccatt
      301 gctggcacaa ggctttccac cagaccggcg acttgctcga gcatcggcca agcctgggcg
      361 ccggcggcga tcaccgcctc catgcgcatc gtgggctcgg gtaggccggc tgcgacaaac
      421 gtcgaataga gtttgagccc catgagcgtt tcggttccgg aacgacgtat ggcctccatc
      481 gcccaggcgc agcaccgatc gtgcagaggg gtcggtggga acgaccagat cccgctccag
      541 gccagctcgt ggaacacaac tggtcctccg ggccagacat ggcgtacgac gttcttcagc
      601 atagacacag gatcagcctg aaattgcaag acaaagcgtc ctaccactgc gtcgaacggc
      661 cggtcgaaca ccatctccgc aggattgcca gcgcggaact ccacgttgcc gagcgatctt
      721 gcctgtgcgt ctgctgttgc cgccgcaacc gcggtcggtg actggtcgac gcccacgacg
      781 tgaccagctg agccgacaag gtctgccacc aagaacgcga cgtggccgcc cccgctgccg
      841 atgtccagga cccgcatgcc ctcggtgatc ccaccctcac gaacaatcct gcgcgtgatc
      901 ggatcgatga gggccgcctg aatcgccagc cgccgtagct cgccctgggt gtgacctagg
      961 acgtagttgt gcccggcggt gcttgtgcta tccgcgacgt ccaccatcaa tgacccctga
     1021 cccggctgat cccgaaagta cagcagcaaa aatacagcag cccacccttc cgaacagtcc
     1081 aacgaccaca cccgacagc
//
LOCUS       DASRPQ010002253         1060 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2804852, whole genome shotgun sequence.
ACCESSION   DASRPQ010002253 DASRPQ010000000
VERSION     DASRPQ010002253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2804852"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..389)
                     /locus_tag="VFD73_25490"
     CDS             complement(<1..389)
                     /locus_tag="VFD73_25490"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZI77333.1"
                     /translation="MLQDEYRLMHALELSHWWFRGRRRILLDLLEQATRSTQRVPEIL
                     DYGCGTGGNTSFYAALGSVVAIEPDRAAVRLAHARGGAQYCRCVGTSLPFRAGVFDAV
                     LASDVLEHIEDDAAAVAEIARVIRPGGV"
     gene            406..>1060
                     /locus_tag="VFD73_25495"
     CDS             406..>1060
                     /locus_tag="VFD73_25495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77334.1"
                     /translation="MKSQLGGNPLARLFGPESGAALRNGQHWLYLLAALLFVAAVRIT
                     MYVWAHESVSFTTDFDLLYYSAKTLTHGINPYRSSPPQIRYPLFYPLPAVLLAIPFTA
                     LPIQFARPAFDIAVGWIFAYGLWRYAPYALLAILSGAYLFALRAGQTTPLVVAGALVP
                     TLGFLLTIKSNTGLACFIGRPSREALIGGVGVLLVSLVLVPSWPADWWRAIHQQSEHI
                     "
BASE COUNT          186 a          350 c          296 g          228 t
ORIGIN      
        1 acgcctccgg gacgaatcac ccgggcaatc tcggctaccg cagcggcatc atcctcgatg
       61 tgctccagca cgtccgacgc cagaacggca tcgaacacgc cggctcgaaa cggcaggctg
      121 gtacccacac agcggcagta ctgcgcgcca ccgcgggcgt gtgcaaggcg gacagcagcc
      181 ctatccggtt cgatcgcgac caccgaaccc aaggctgcat agaatgaggt gttccctcca
      241 gtgccgcagc catagtccaa gatttcaggc acccgttggg ttgagcgggt tgcctgctcc
      301 agaaggtcga gcagaatacg ccggcgaccg cgaaaccacc aatggctcag ctccagagcg
      361 tgcatcagtc ggtactcgtc ctgcagcact gtgtttcccc cgtcggtgaa aagtcagctt
      421 ggagggaacc ctctagctcg cctgtttggg ccggagagtg gcgcggcgct tcggaacggg
      481 cagcattggc tgtacctcct ggcagcgctg ttgttcgtgg cggcagtacg gatcacgatg
      541 tacgtctggg ctcacgagtc agtctcgttc acgaccgatt tcgatcttct gtactactct
      601 gccaagactc tcacccatgg tataaatccc tatcggtcgt cgccgcctca gatccggtac
      661 ccgctgttct acccgttgcc ggcggtgtta ctagcaatcc cgtttaccgc attacctatc
      721 cagttcgccc ggccagcctt tgatatcgcc gttggttgga tctttgccta tggcctgtgg
      781 cgctacgcgc cgtacgccct gctcgctatt ctgtctggtg cctacctgtt cgctctccga
      841 gccggacaaa ccacgcctct tgttgtggca ggagctctcg taccaacgct tgggtttctc
      901 cttaccatca agtcgaacac cggactggcc tgcttcatcg gccgaccctc aagagaggct
      961 ctgatcggag gcgttggagt cctcctggtg tccctcgtgc tcgtgccgtc ctggcccgcc
     1021 gattggtggc gcgccattca ccagcagagc gaacatatcc
//
LOCUS       DASRPQ010002254         1496 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1536801, whole genome shotgun sequence.
ACCESSION   DASRPQ010002254 DASRPQ010000000
VERSION     DASRPQ010002254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1496
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1536801"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..847)
                     /locus_tag="VFD73_25500"
     CDS             complement(<1..847)
                     /locus_tag="VFD73_25500"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HZI77335.1"
                     /translation="MAAEYATGTVFDITECAREPIHLLGSVQSHGALLALAEPDLTIT
                     VASANTTAVLGVAPDVLLGLPVADILGAEQARQLHEAASDDDSVAAIVPVQLEQRKTG
                     YQLEASVHRSDGLVICEFERSADQPFRFSSFYPAARRALLQLEGTRTVTGLSQAAVRQ
                     VRAFTGYDRVVAYRFDGDGPGEVIAEDVAPGWEPWLGLWFPAIDVPPQARRLYLQNWI
                     RVIADVNDRGATLIPPQRPSTQRPLDLSGSALRTVSSYHLEYLRNIGVRGSMSLSLIQ
                     DGRLWG"
     gene            974..>1496
                     /locus_tag="VFD73_25505"
     CDS             974..>1496
                     /locus_tag="VFD73_25505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="biliverdin-producing heme oxygenase"
                     /protein_id="HZI77336.1"
                     /translation="MPGYDSAVTQGPRRGFLWSQLRESTQAAHAQAEASLAPLAQPDS
                     LAGYAALLCVLWGFQAPMERLLGYQELPSAVDWSARKRLSSLAADLIDLGVSDAPLPQ
                     ATGLPALSSPGAVWGTLYVTEGATLGGRVLRRHIEARLGPVPVRFLDGHGDRTQPMWR
                     DLAQLADQYVTTKH"
BASE COUNT          260 a          507 c          479 g          250 t
ORIGIN      
        1 gtccccacag ccgaccatct tggatgagcg acagggacat ggagccgcgc acgccgatgt
       61 tgcgcaggta ctccaggtga tagctcgaca cggtgcgtag cgccgaacca gacaagtcca
      121 ggggccgctg cgtgctcgga cgctgcgggg gtatcaacgt cgccccgcgg tcgttgacgt
      181 cggcgatgac tcgtatccag ttctgcaggt acaggcgccg tgcctgcggc ggcacgtcaa
      241 tcgccgggaa ccatagcccc agccacggct cccagcccgg cgcgacatcc tccgcgatca
      301 cctcgcccgg cccgtcgcca tcaaagcggt aggcgaccac ccggtcgtag ccggtgaagg
      361 cccgcacctg ccgcacggcg gcctgggata gtcctgtcac cgtacgcgtg ccctccaact
      421 gcagcaacgc gcgccgcgca gcagggtaga acgacgagaa ccggaatggc tggtcggcgg
      481 agcgctcgaa ctcgcagatc actaggccgt cgctgcggtg cacgctggcc tcgagctggt
      541 accccgtctt gcgctgctcc aactgaaccg gcactatcgc ggcgacgctg tcatcatcag
      601 acgctgcctc gtgaagctgc cgggcctgtt cggcaccgag aatgtctgct accggcaaac
      661 ctagcagcac gtccggtgcc acccccagca ctgcggtggt attcgcgctg gccactgtga
      721 tagtcagatc cggctcggcc agcgccagca acgcgccgtg tgactgtacc gagcccagca
      781 gatgaatcgg ttcgcgagcg cactcggtaa tgtcgaacac ggttccagtg gcatattcgg
      841 cggccacctc acgcgccgat agcctggact gcgtttcgtc cgtcatgctg cctcccgcac
      901 cgccaggccc agcctcggct ccaaagcgca gacgttctta ggacaggcta atccagcgat
      961 gctttaagcg gacgtgcctg gttacgatag tgcggtgacg cagggacctc ggcgcgggtt
     1021 cctctggagc cagctacggg aatccactca ggctgcgcat gcgcaggctg aggcgagtct
     1081 ggcgccgctt gcgcagccag acagtctcgc cgggtatgcg gcattgctat gcgtgctttg
     1141 gggttttcag gcacccatgg agcggctgct gggctaccag gaattgccgt cagcggtcga
     1201 ttggtcggcg cggaagcgac taagttcact ggccgcggac ctgatcgatc ttggagtgtc
     1261 cgacgcgcca ctaccccaag cgaccgggct gcccgcgctc tccagtcccg gcgcggtgtg
     1321 gggaactctg tacgttaccg aaggggcaac cctgggcggc cgggtattgc gacgtcacat
     1381 cgaagcccgg ctcggaccgg taccggtgag gttcctcgac ggccacggcg accgcactca
     1441 gccgatgtgg cgtgacctag cccagctcgc cgaccagtac gtcactacca agcacg
//
LOCUS       DASRPQ010002255         2825 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3077581, whole genome shotgun sequence.
ACCESSION   DASRPQ010002255 DASRPQ010000000
VERSION     DASRPQ010002255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2825
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3077581"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..610
                     /locus_tag="VFD73_25510"
     CDS             <1..610
                     /locus_tag="VFD73_25510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003404757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS256 family transposase"
                     /protein_id="HZI77337.1"
                     /translation="GEGAKFWLRVCSEIKNRGTRDVLMVVCDGLKGLPDAVNSVWEKT
                     IVQTCIVHLLRNSFKYASKRDWGQLAKDLKPIYTAASEAEALDRFAEFSGKWEKRYPA
                     IIRLWENAWAEFVPFLRFDREIRTVICTTNAIESINARLRRAVNARGHFPTEQAALKC
                     LYLALMSLDPTGKGRKRWTNRWKAALNAFDITFDGRLSAGRK"
     gene            complement(915..2357)
                     /locus_tag="VFD73_25515"
     CDS             complement(915..2357)
                     /locus_tag="VFD73_25515"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HZI77338.1"
                     /translation="MSDRLLSGHGPLDVVLGGGLPANAISLITGLPGTGKTIIAQQYV
                     FQNARPEAPAVYFSTVSEPLEKIVRFGQSLDFFDRAAVGKYVFYEDLGAVVGAGGLAS
                     VTKQIAAVLKERRPRLVVIDSFKALHAFADSNGDFREFLYELAGMLSALAVSSLWVGE
                     YEEAEVGSLAEFAVADAILNLTAKRVGQREMRFLTVRKLRGSGFRSGQHAYRLSSSGL
                     HLSPRFASTLIEAEYRLGDVRASSGIPALDELLGSGYWPGASTLIAGPSGSGKTLMGL
                     HFIFNGARQEEPGVIASLQENRTQLQRVAAGFGWSLSEPHVEVMYRSPVDIYIDEWVY
                     ELIQVVERTGARRVLVDSLADLRIAAADETRFQEFVYSLVQRFSQQGVSILMTLEIPE
                     LFHAERVSDSAVSHLSDNVVLLSYIKEEKSISRAMAVIKSRASYHDPGIRQFNIGPDG
                     IVLADSTLPPSEPVSPERHTASRRASRPKT"
     gene            complement(2354..>2825)
                     /locus_tag="VFD73_25520"
     CDS             complement(2354..>2825)
                     /locus_tag="VFD73_25520"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI77339.1"
                     /translation="GASAADAHRLLAEQADAGPPAAAQAGARARLVILLADRDPYAAE
                     FQEYFLRTEGFEVEVALSQEAARESFSEHPPSLAVVELLISGGAGLDLCRFFKKQGNV
                     LIVAVSVLESRDLAVEAGADAFLLKPLEPLQLVSTVRDLLGSSAFLGPLPGAGS"
BASE COUNT          546 a          889 c          871 g          519 t
ORIGIN      
        1 cggggagggg gctaagttct ggctgcgggt ctgctcggag atcaagaacc gcggcacccg
       61 ggacgtgctg atggtggtct gcgacgggct gaaaggactc ccggacgcgg tgaattccgt
      121 gtgggagaag acgatcgtgc agacgtgcat cgttcatctc ctgcggaatt cgttcaagta
      181 cgcctcgaaa cgggactggg ggcaactcgc caaggacctc aagcccatct acaccgccgc
      241 gtccgaggcc gaggcgctcg accggttcgc cgaattctcc ggcaagtggg agaaacgcta
      301 cccggccatc atccggctgt gggagaacgc ctgggccgaa ttcgtcccct tcctgcggtt
      361 tgaccgggaa ataaggacgg tgatctgcac gacgaatgcg atcgagtcga tcaacgcccg
      421 gctgcgccgc gccgtgaacg cccgcggcca cttccccacc gagcaggccg ccctcaagtg
      481 cctctacctg gccctcatga gcctcgaccc gaccgggaag ggccgcaagc ggtggaccaa
      541 ccggtggaag gccgccctca acgccttcga catcaccttc gacggccgcc tcagcgcggg
      601 caggaagtaa caaaccaaga tcaagttaca ccgttagatt gacagacccg gtgtggtcgc
      661 aactagtctg tgttctaccc gaatcgatcg ccgtgcccgt ccatgaccat atgatgagga
      721 ttgggttatg gcggttaata gcggtaactc gcggttcctt cgggcttagt ctgctggacc
      781 tggtcgagat tagttacccc gctgccagca tccatgcctg atattgccgc ataatcttgg
      841 cgatcattgc gtcacgacag ccgggtatcg tgcgagtggc ctctgtctgc ggggcggcct
      901 ggggatgccg tcggctatgt ttttggtctg ctggcccggc gtgaggctgt gtggcgttcg
      961 gggctgaccg gctcgctggg gggcaaggtg ctgtcagcga gcacgatgcc gtcagggccg
     1021 atattgaatt gacggatgcc gggatcgtga tagcttgcgc gggacttgat gactgccatg
     1081 gcccggctga tcgatttttc ctctttgatg tagctgagta gcactacgtt gtcggacaga
     1141 tgggaaactg cggagtccga gacgcgttcg gcatggaaaa gttcggggat ttcgagcgtc
     1201 atcagtatgc tcacgccttg ttgcgaaaag cgttgcacca gcgagtagac gaattcctgg
     1261 aaccgtgtct cgtctgccgc ggcaatcctg agatcggcaa ggctgtcgac gagtactcgc
     1321 ctggctccgg tgcgctccac cacctggatt agctcataga cccattcgtc gatatagatg
     1381 tcgactggtg agcggtacat cacctccaca tgcggctcgc tcagggacca gccgaaacct
     1441 gcggctaccc gctggagctg cgtcctgttt tcctgcaggg aggcgatcac gccgggctct
     1501 tcctggcggg cgccgttgaa gatgaaatgg aggcccatga gcgtcttccc cgagcctgac
     1561 gggccggcga taagtgttga cgcaccgggc cagtacccgg acccgagcag ctcatctagc
     1621 gcggggatgc ccgacgacgc ccgtacatcg cctagccggt actccgcctc gatcagcgtg
     1681 ctggcgaacc tgggggaaag atgaaggccg ctgctgctga gccggtatgc gtgctggccg
     1741 gaccggaagc cgctgccccg cagtttccgg accgtaagaa agcgcatctc tcgctggccg
     1801 acccttttgg ccgtcagatt taggatcgcg tctgctacgg caaactccgc cagtgagcca
     1861 acctcggctt cctcatattc acccacccac aaggaagaga ccgcgagcgc gctcagcatg
     1921 ccagcgagtt catacagaaa ttcccggaaa tcgccgttac tgtccgcgaa cgcgtgtaga
     1981 gccttgaagc tgtcaatcac gacaagccgc gggcggcgtt ccttgagtac cgcggcgatc
     2041 tgcttggtaa cactggcaag gccaccagcg cctaccacag ccccgagatc ctcatagaaa
     2101 acatatttac cgaccgcagc ccggtcgaag aagtccaggc tctggccgaa gcgaacgatc
     2161 ttctccagcg gctccgagac cgtcgaaaaa tagaccgcag gagcctccgg tcgcgcgttc
     2221 tggaagacgt actgctgcgc gataatcgtc ttgccggttc cgggcaagcc cgtgatgagg
     2281 ctgatcgcgt tcgcgggcag ccctcccccc aggaccacat cgagcggccc atgcccgctc
     2341 agaagccggt cactcacgac ccagcccccg gcagcgggcc aaggaacgca ctcgacccga
     2401 ggagatccct gacggtcgat accagctgca agggttccag tggtttcagc aagaaggcgt
     2461 cggcacccgc ttcgaccgcc aggtcccgag actccaggac cgacaccgcg actatcagca
     2521 cattgccctg tttcttgaag aagcggcaga gatccagccc cgccccgccg gagatgagaa
     2581 gctcgacgac cgcaagtgag ggcgggtgtt cgctgaagga ctcccgcgct gcctcctggc
     2641 tcagcgctac ttcgacctcg aatccctcgg tcctcaggaa atactcctga aactctgccg
     2701 cgtaggggtc gcggtcggcc aggaggatga caagccgtgc acgcgctcca gcctgcgcag
     2761 ccgctggcgg tccggcgtcg gcctgctcgg ccagcagacg atgagcatca gccgcacttg
     2821 caccc
//
LOCUS       DASRPQ010002256         3382 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_269259, whole genome shotgun sequence.
ACCESSION   DASRPQ010002256 DASRPQ010000000
VERSION     DASRPQ010002256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3382
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_269259"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(548..1735)
                     /locus_tag="VFD73_25525"
     CDS             complement(548..1735)
                     /locus_tag="VFD73_25525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77340.1"
                     /translation="MRRSLWAASAAIGLAVLVLLLAIAVVPLTLAARQGVLYNAGQVA
                     TFLPIAAVGFMVAWHRPRNPIGWLLIVTAAGALLTVDGQLYAWVVYRLVHHLPFGPVA
                     LFLAFAWLTNFVTLPLAILLFPDGVLPARWRWVPWAYLAVSGFLLVSEYVAVVSLMVA
                     HDVRIDASGGLASLDSRSGGTAWLSSARAVIFPILIVFWLSFIVRLLLSWRRASIEQR
                     QQLKWLLTGCVITLASGVLSIAPVPAAFQSAVDFISDLGFVALPICVGIAILKYRLYD
                     IDRIISRTLAYAIVTGVLIGLYAGLVLLATRGLSFRTPVAVAASTLTAAALFNPLRQR
                     VQRIVDRRFNRARYDADQIVAAFAARLKGTVDLLSVRDDLATAVDQALQPVHVFVWIN
                     ERG"
     gene            complement(2121..3137)
                     /locus_tag="VFD73_25530"
     CDS             complement(2121..3137)
                     /locus_tag="VFD73_25530"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HZI77341.1"
                     /translation="MHVAHQVLGSGPPDLVLVPGFVSHVEAAWDWPYLARFLHRLASF
                     GRLVLFDKRGTGLSDPMKRPPTLAERVDDIRAVMDAVGVERAHLFGVSEGGALSIAFA
                     ARYPHRVESLILYGSYPRKVATTDYPWGVSRQTVAQFLDRFDEAWASGAWWDIVNPDL
                     PLDPDTQRWWARYLRVGASPSMARDLMLMNAQIDVRSLLSEIHSPTLVLHRGDDRWVE
                     VGNGRYLASHIVGAKFVELPGADHRPWVENADAVLDQVQAAVCGTLRRPRHSNSSLGL
                     HALSRREHEIVLLAVAGQSTPDIARHLFLSERTIETHLRNAYTKLDVSSKLELTRRAS
                     ELGI"
BASE COUNT          660 a         1092 c         1101 g          529 t
ORIGIN      
        1 cagctccgca ggtcaggcca tgcgacaggc ccggatggca cagattccca agctgatagt
       61 gcgggttcga ttcccgtcac ccgctcgaca gactaaggcc cagttcagcg cgggttggag
      121 cagccgctcc ccggctcttg agagttgttg tgatcatatg aagcgcgggg atgatggcat
      181 cagggatgct gacgacgcgc cggccggcct tggactcagg cgaaccaagg agcatttcgc
      241 cagttgaccg gtccacgtat gcagccccga ccctcacgat gcgcgtatcc ggccctgcct
      301 tggcgctcgc ccgggcacac gccgggccac agctgaaggg cgccgatcaa gacagttcac
      361 aggcgcgctg gccggagctg tggtagccgt cattcgcgga accgattgtc cagctccgcg
      421 gttccgcgtc attgccattc tctgcctgcc aggtcgggcc gacactggca ttaactgggc
      481 agcggccgcg atgcatcttg gcgctggaca aaggcaacga ggggaagccg gatcgccagg
      541 ccggccgtta cccgcgttcg tttatccaca caaagacatg gacgggttga agggcctggt
      601 ccacagcagt tgccaggtcg tcccggactg agagcaggtc cacggtgccc ttcagccggg
      661 ccgcgaaggc ggctacgatc tggtcggcgt catagcgggc gcgattgaac cgccggtcca
      721 caatccgctg aacccgctgc cgcagagggt tgaatagcgc cgccgcggtc agcgtcgagg
      781 cggccaccgc caccggggtg cggaaggaca gcccccgggt ggccagcaga acgaggcccg
      841 cgtatagccc gatcagcacg ccggtgacga tggcgtaggc caaggtgcgg gagatgatcc
      901 ggtcgatgtc atacagccgg tatttcagga tcgcgatgcc gacgcatatc gggagtgcga
      961 cgaaaccgag gtccgatatg aaatccacgg cgctctggaa ggcggccgga acgggagcaa
     1021 tgctgagtac gccgctggcc aaggtgatca cgcacccagt cagcagccac ttcagttgct
     1081 gccgctgctc gatgctggca cgtcgccagc tcagcagcag cctaacgatg aacgatagcc
     1141 agaacacgat cagaatcggg aagatcacgg cccgggctga cgacagccag gctgtaccgc
     1201 cggaacggct gtccagggag gccaggccac cgctggcatc aatgcggaca tcatgggcga
     1261 ccatcaggct tacgactgcg acgtactcac tcaccagcaa gaatccgctg acagcgagat
     1321 aagcccaggg cacccagcgc cagcgcgcgg gcagtacccc gtccgggaac agcaggatcg
     1381 ccagcggcaa tgtcacgaag ttggtaagcc atgcaaatgc cagaaacagg gcgaccgggc
     1441 cgaacggcag atggtgaacc aggcggtata ccacccatgc gtacagctgt ccgtcgacgg
     1501 tcagcaacgc tccggctgcg gtgacgatca gcagccagcc gatcggattg cggggccggt
     1561 gccaggcaac catgaagccg accgccgcga tcggcaggaa cgtggcaact tggccggcgt
     1621 tatagagaac gccctggcgg gcggccagcg tgagagggac aacggcgatg gcgagcagca
     1681 gcaccaagac tgccagcccg atcgccgcgg atgccgccca cagactccgc ctcacgccca
     1741 gcgcctgcgg ggccagttcg ctggacgacc ctgccctcat tcatgtcacg ctacgcccgg
     1801 aacgttccgg aaacgttacc gttcagcatg gaagatgcaa ggtcggagag ccatgcgggc
     1861 cggtgccgag caagatcgtc gtgccattcc caagctgata gtgcgggttc gattcccgtc
     1921 acccgctcta cgacaaaacc caggtcaggt atgctgcccg aaatcggacc cccaccttgt
     1981 tcgggccatg gccgagagcg gtaggttgct cagcccggtc ctaggcgatg ccgatgttct
     2041 gggtgtggcc tgtacgctct tcccatcatc gtgatcctgc ttcgccgccc gagccagagg
     2101 aaatgcctct tcggatcggt tcaaatgccg agttcggatg ctcgtcgggt gagctcaagc
     2161 ttggaactga cgtcgagttt cgtgtaggcg ttgcgcaggt gtgtttcgat agtgcgttca
     2221 ctgaggaaca ggtgccgggc gatgtccggc gttgactggc cagcgacggc gagcaggacg
     2281 atctcgtgct cgcggcggct gagcgcatgc aaaccgagcg aagaattgct gtggcggggg
     2341 cggcggagcg tgccgcagac tgcagcctgc acctgatcga gcacggcgtc ggcgttttcc
     2401 acccaagggc gatgatcagc gccgggcagt tcgacgaact tcgcgccgac gatgtggctc
     2461 gcgaggtagc ggccgttgcc gacctcgacc caacggtcat cgccgcgatg caacaccagt
     2521 gtcggggagt ggatttcaga caacagactc cgaacgtcga tctgcgcgtt catcaacatc
     2581 aggtcgcggg ccatgctggg gctggcaccc acgcgcaggt agcgcgccca ccagcgctgg
     2641 gtgtctgggt caaggggtag atccgggttg acgatgtccc accatgctcc gctggcccac
     2701 gcctcatcga agcgatcgag gaactgggcg acagtctgac gcgacacgcc ccacgggtag
     2761 tcggtggtcg cgaccttgcg cgggtaggac ccataaagaa tcagcgactc aacccggtgt
     2821 gggtaccggg cggcgaacgc gatgctcaac gcgccgccct cggacacccc aaacaggtgc
     2881 gctcgctcta cgccgaccgc gtccatcacc gcccggatat cgtcgacccg ctcggccaag
     2941 gtgggcgggc gtttcattgg atctgagagc ccggtgccgc gcttatcgaa caagaccagc
     3001 cgaccaaacg atgccagtcg gtgcaggaac cgggccagat acggccagtc ccaggccgcc
     3061 tcgacatgtg acacaaaccc cggcaccagc accagatccg gcggccccga accaaggacc
     3121 tggtgagcga cgtgcacctg cccgctgcgg gcgtaccttg tggccggacc cactccagcc
     3181 aatctagccg tcatgttcac gagaaaccac cccacgcggg gcgccgtcct ggggcaggcc
     3241 gctcaactcg gtaacgggca agaggtcttt cctgtgcggc cagaagccgg ctagtgcctt
     3301 cacgccgtct cggctcttgc cgtacctgcc gtgtagaagc cgcctggcgg ccgcgggctc
     3361 tcaatcgagg ccgcggccgc cc
//
LOCUS       DASRPQ010002257         2015 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4655592, whole genome shotgun sequence.
ACCESSION   DASRPQ010002257 DASRPQ010000000
VERSION     DASRPQ010002257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2015
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4655592"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..402
                     /locus_tag="VFD73_25535"
     CDS             <1..402
                     /locus_tag="VFD73_25535"
                     /inference="COORDINATES: protein motif:HMM:NF019342.4"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HZI77342.1"
                     /translation="QCPGALLHREFERYDRLQHELAIEPGSWMAHMYPGQSHGRVNTV
                     HHQAIKELGPGLQVEARSVLDGLIEAVRYQAAPGEKIAPWIYAVQWHPEFQDPADESL
                     LPTAPLRESFLRAAMERRRQRVEDRRVPCSE"
     gene            390..1763
                     /locus_tag="VFD73_25540"
     CDS             390..1763
                     /locus_tag="VFD73_25540"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HZI77343.1"
                     /translation="MLRVINPATQDVIAELPEDNAQTLAQKTRTGRSAQRDWARTPLS
                     DRLAAVRRFRDLLQSRRESLAATLTSEVGKPIRQSRNELNAMQARIDFFLEHTGEAIE
                     DEVVHLAPGSPSMEERIHFEPLGVVANISAWNYPYFVGSNVYLPALLTGNVVLYKPSE
                     FATLSGLDVAGMLHEVGIPREVFQPIIGAGEIGRALVQEDIDAVCFTGSYATGRKIAE
                     VGAPRLLRVQLELGGKDPAYVCDDVDVPGAAAALVEGSFYNAGQSCCAVERVYVHRRI
                     GKSFIEAFTEAARALVVGDPRDERTDIGPLARRAQLDVLEAQVGDAVTKGARLVLGGK
                     RCSGRGNYFETTVLTNVDHRMALMREESFGPIIGVQEVSDDKEAVALMNDTDYGLTAA
                     VYTPDRARAERILAEVNAGSAYWNCCDRVSPRLPWSGRKHSGLGTTLSVAGIRAFVQP
                     KAWHLRG"
BASE COUNT          388 a          597 c          679 g          351 t
ORIGIN      
        1 cagtgtcccg gtgcgcttct tcatcgcgaa ttcgaacgct acgaccggct gcagcacgag
       61 cttgccatcg agccggggtc ctggatggcc cacatgtatc cggggcaaag ccatggccgg
      121 gtgaacaccg tgcatcacca ggcgatcaaa gagctcggcc cgggtttgca ggtggaggcc
      181 cgttccgtgc tggatggact catcgaagcg gtgcgctacc aggcggcccc gggagagaaa
      241 atcgcgccct ggatttacgc ggtgcagtgg catcccgagt ttcaggatcc agcagacgaa
      301 tcgctactgc cgacggcgcc cctccgagag tcgttcttgc gtgccgctat ggagcgccgc
      361 cggcagaggg tggaagatcg gagggtaccg tgctcagagt gatcaatccc gccactcagg
      421 acgtcatagc cgagcttccg gaagacaacg ctcagacact ggctcaaaag accagaaccg
      481 gtcgatccgc ccagcgggat tgggcgcgga ctccgttgtc agatcgactg gcagcggtgc
      541 gccgcttccg cgacctgctg cagtctcgcc gcgagtcact ggcggccacg ctcacgtccg
      601 aggtagggaa accgatccgt caatcgcgga acgagctgaa cgcgatgcaa gcgcgaatcg
      661 atttctttct cgagcatacc ggcgaagcca tcgaggacga ggtggtccac ctcgcgccgg
      721 gatcgccgtc gatggaagag cggatccact ttgagccact gggggtggtc gccaatatct
      781 cggcctggaa ctatccctac ttcgtcggct ccaacgtcta cctccctgct ctgctgaccg
      841 gcaatgtggt gctatacaaa ccctcggagt ttgcgacgct gtccggtctc gatgtggcgg
      901 gaatgcttca tgaagtgggg attccccgcg aggtctttca gccgatcatc ggtgccggcg
      961 agatcgggcg ggcactggtg caagaggata tcgacgcggt ttgctttacc ggctcgtacg
     1021 cgactggacg gaaaatcgcc gaggtggggg cgccccggct gctgcgagtc cagctcgagt
     1081 tgggtggcaa agaccccgcg tacgtgtgtg atgacgtgga cgtgcccggt gctgccgccg
     1141 cgctggtgga aggctcgttc tataacgccg ggcagagctg ctgcgcggtg gaacgggttt
     1201 acgtccaccg ccggataggc aagagcttca ttgaggcatt cacggaagcg gcgcgtgccc
     1261 tcgtcgtcgg cgacccacga gacgagcgca cggatatcgg ccccttggcg cgaagggcgc
     1321 agctcgacgt gctcgaggcg caggtaggag acgcggtaac caaaggtgcg cggctggtgc
     1381 tgggtggtaa acgttgctcc ggacgcggca attactttga gaccacggtg ctcaccaacg
     1441 tcgaccatcg catggcgctg atgcgggagg aaagcttcgg gcccatcatc ggagtacagg
     1501 aggtgagcga cgataaggag gcggtcgcgc tcatgaacga caccgactac ggcctgacgg
     1561 ccgcggtata cacccccgat cgggcgcggg cggagcggat tctggcagag gtgaacgcgg
     1621 gaagtgccta ctggaactgc tgcgaccggg tgagccccag actgccctgg tcgggacgaa
     1681 agcactccgg cctgggcacc acattatcgg tggcaggcat cagagcattc gtccagccga
     1741 aggcgtggca tcttcgaggc taaggggcag gggtaactag tgatcaggga ctcgtgactc
     1801 gcgactcgtt actggaacct ggcgactgat agctgagact gaagagaggc gccggctcgg
     1861 aacgcgccga tccgcgccgg aatccctacc gctggcgagg tcgtggtcga aaccacctat
     1921 atggcgcagc tcggcacctg gctcgccgca cagaccgaca tgcagtacgt gattcatccc
     1981 ggaggattgc gggatgcaca caacgcgctt gtctt
//
LOCUS       DASRPQ010002258         3078 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1855498, whole genome shotgun sequence.
ACCESSION   DASRPQ010002258 DASRPQ010000000
VERSION     DASRPQ010002258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3078
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1855498"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1549
                     /locus_tag="VFD73_25545"
     CDS             <1..1549
                     /locus_tag="VFD73_25545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77344.1"
                     /translation="LIAGIGVTPYLYIYLRSVQHPIINEAAPLIEDAKHRFSALLAVI
                     RRAQYPPRTPLDDPTVAHGPDNPGRSITILGIQAADYIVYFTWQWAKSVAAWAQLIVT
                     LVFVALGIRGTVAQWRSDRAAWWLLAGLFLVTGPGLVIYMNFKPGFGRWFNAYPSGAA
                     HEVRERDYFFVVSFIVWGLWAGIGLVTVARALLQRWNASKIRRFIPAVLAFAVVPVFL
                     NWREASRRGPDARLAADFAYDLLNTAPPYGVLFTYGDNDTFPLWWAQEVAGVRQDVVV
                     ICLALANTDWYMRQLRENPVRLINRKTLPRIWQGAVRPPPTGPLHVMTDAMITSAMNG
                     YLVPEDQQITLGPLTRVFKKGTYLLPSSILSLGVVQQNVGHRPIVWAITTGREFAGLS
                     EYVVQQGLGYALRTAPADTTSPALDTRRLAGAPLDIPTTERLVWDTYRYADLLNADVT
                     KLESTSASIASTLSLPFTQLTYAYSARGQQQKLLRAIDRAMQLTPNPSLRTALAELRL
                     QGAKAPQ"
     gene            1591..2277
                     /locus_tag="VFD73_25550"
     CDS             1591..2277
                     /locus_tag="VFD73_25550"
                     /inference="COORDINATES: protein motif:HMM:TIGR00044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HZI77345.1"
                     /translation="MDFSGLPARLADVRETIRRRQEIGGWHHPVRIVAVTKTHGPEVV
                     RAAFSAGLRDVGENRIQEALPKQDALSDLPLEWHLVGTLQRNKARQAAGRFALIHSVD
                     RTELAVELNRRVPEGSRQRILVQVNCSGEPQKGGVAPESLSSLLDQLHRLERLEVLGL
                     MTMSALGGGEKGQRHAFRQLRELRDVAEGEGHRLSELSMGMSDDFPVAVEEGATMVRL
                     GTILFGERTA"
     gene            2274..2798
                     /locus_tag="VFD73_25555"
     CDS             2274..2798
                     /locus_tag="VFD73_25555"
                     /inference="COORDINATES: protein motif:HMM:NF016959.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DivIVA domain-containing protein"
                     /protein_id="HZI77346.1"
                     /translation="MSEDHSFHLTPLDVRSQEFARALRGYDRAQVDEFKLAISEELER
                     LLRDRSQHEERLRGAQEQLRAFRDRERAMNEALVAAQQLRVDSREQAEREAELVLREA
                     RAEAERILERAHQEEALVRERADGVARQFTAYVASFRTLLERHLGEVDGLQRRVRPGT
                     SGSSDETVPGRAQG"
     gene            2795..>3078
                     /locus_tag="VFD73_25560"
     CDS             2795..>3078
                     /locus_tag="VFD73_25560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HZI77347.1"
                     /translation="MTSVSLFDEIRSAVDAVREITTLKPSVAIILGTGLGQLAESIEI
                     EATLPYERIPGFPLSTVESHAGRLLLGRLGRRPVVAMQGRFHRYEGYSLNA"
BASE COUNT          537 a          944 c         1009 g          588 t
ORIGIN      
        1 cctgatcgcc ggaatcggcg tgacgccgta tctctatatc tatctgcgat cggtgcagca
       61 tccgatcatc aacgaagctg cccctcttat cgaggatgcg aagcaccggt tttccgcgct
      121 cctggccgtg atccgccggg cccagtatcc acctcgcact cctctcgacg atcccacggt
      181 tgcccacggg ccggacaatc ccggtcgctc gatcacaatc ctcggaattc aggcagccga
      241 ttacatcgtc tacttcacct ggcaatgggc caagtcggta gcggcctggg cacagctgat
      301 cgtgacgctg gtcttcgtcg cgctcggcat ccggggcaca gtggctcagt ggcggtccga
      361 ccgtgcggcg tggtggcttc ttgccgggct ctttctggtg actggcccgg gtctcgtgat
      421 ctacatgaat ttcaagcccg ggttcggacg ctggttcaac gcctatccgt ccggcgcggc
      481 tcatgaggtg cgggaacgag actacttctt cgtggtcagc ttcattgtct ggggactgtg
      541 ggccggaatc ggattggtca cggtcgcccg cgccctgctg cagcgctgga atgcgtcgaa
      601 aatccgtcgg ttcatccccg cggtgctggc gttcgctgtg gtcccggtat tcctcaactg
      661 gcgcgaggcg tcgcgccgag gccccgacgc tcgacttgcc gccgacttcg cgtatgacct
      721 tctgaatacc gcgcccccct acggagtgct gttcacctat ggtgacaacg acacctttcc
      781 gctgtggtgg gctcaggaag tggctggggt ccggcaggat gtggttgtga tctgcctggc
      841 gctcgccaat accgattggt acatgcgaca gttgcgagaa aatccggtgc gtctgatcaa
      901 ccgaaaaacg ctgcccagga tctggcaggg tgcggtgcga cctcctccca cgggcccctt
      961 gcatgtcatg acggacgcca tgatcacgtc ggcgatgaac gggtatctcg tgccggaaga
     1021 ccagcagatc acgctgggcc cgctcacgcg agttttcaag aaaggcacct acctgctgcc
     1081 cagcagcata ctgagcctgg gcgtcgttca gcagaacgtc ggtcaccggc caattgtctg
     1141 ggccatcacc accggccggg agttcgccgg cctcagtgag tacgtggtcc aacagggtct
     1201 cggatatgcg ctgcgtaccg ctcccgccga cacgacttca ccggccctgg acactcggcg
     1261 gctggcggga gccccattgg acattcccac caccgaacgg ctggtgtggg acacctatcg
     1321 ctatgcggac ttgttgaacg cggatgtgac caaattggag agcaccagcg cgagcatcgc
     1381 gtcgacgctg tcgcttcctt tcacccagct gacctacgcc tatagcgctc gtggccagca
     1441 gcagaagctg ctccgagcga ttgatcgtgc gatgcagctc acgcccaatc ccagcctgcg
     1501 gaccgccttg gccgagctgc ggctacaggg agccaaagcc ccgcagtaag aacttcaatc
     1561 tcgcagcatc cttcggtaaa ttagaaggtt atggatttct ccggccttcc ggcccgcctg
     1621 gcagacgtgc gagaaacgat ccgccgtcgc caggagatcg gggggtggca ccatccagtt
     1681 cgtatcgtgg cggtcaccaa gacgcacggt cccgaggtgg tgcgtgcggc attttccgcc
     1741 gggctccgcg acgttggtga gaatcgaatt caggaagcgt tgcccaagca ggatgccttg
     1801 agtgacctgc ctctggaatg gcatctggtg ggaacgctgc aacggaacaa ggcgcggcag
     1861 gcggccggac gcttcgccct gattcactca gtggatcgga cggagcttgc ggtcgagcta
     1921 aatcggagag ttccagaggg aagccgtcag cggattctgg tgcaggtcaa ttgctccggc
     1981 gagccccaga agggcggggt agcacctgag tcgctttcga gtctgctgga tcaactccac
     2041 cggctggagc gtctggaggt cctgggattg atgaccatga gcgccctcgg cggcggagag
     2101 aagggtcaac gacatgcctt ccgccagctg cgcgagcttc gagacgtggc tgagggcgag
     2161 ggacaccgct tgagcgagct ctctatgggc atgtcggacg actttcccgt tgcggtggaa
     2221 gaaggggcga cgatggtgcg cctcggtacc attctgttcg gagagcgaac tgcgtgagcg
     2281 aagatcactc ttttcatctg acgccgctcg atgtgcgctc ccaggagttc gcccgcgcgc
     2341 tgaggggata cgaccgcgcc caggtggacg agttcaagct ggcgatttcc gaggagctcg
     2401 aacgactcct gcgggaccgg agccagcatg aggagcgcct ccgcggtgcg caggaacagc
     2461 ttcgcgcctt ccgcgaccgt gagcgcgcga tgaatgaagc gctggtggcg gcgcagcagc
     2521 tcagagtaga cagtcgcgaa caggcggagc gagaggcgga gctggtgctg cgcgaagcgc
     2581 gggcggaggc ggaacggatt ctggagcgcg cccatcagga ggaggcgttg gttcgggagc
     2641 gagccgatgg ggttgcccgc cagtttaccg cctacgtggc gagcttccgc accctgctgg
     2701 agcggcatct gggcgaggtg gatggactgc agcgccgggt ccgtcccggc acatcgggct
     2761 cgagcgatga gaccgtgccc gggcgagccc agggatgact tcggtttcct tgttcgacga
     2821 gatccgctct gcggtggacg cagttcgcga gatcaccaca ctgaagccgt cggtcgcaat
     2881 cattctgggt accggcttgg ggcaactggc cgagagtatc gaaatcgagg ccacgctccc
     2941 gtacgagcga attcccgggt ttcccctctc caccgtcgag agtcatgccg gccggctgtt
     3001 gctgggccgc ctgggccggc gaccggtggt cgccatgcag ggccgctttc atcgctacga
     3061 gggctattcc ctgaacgc
//
LOCUS       DASRPQ010002259         1107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1538122, whole genome shotgun sequence.
ACCESSION   DASRPQ010002259 DASRPQ010000000
VERSION     DASRPQ010002259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1538122"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..754)
                     /locus_tag="VFD73_25565"
     CDS             complement(<1..754)
                     /locus_tag="VFD73_25565"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI77348.1"
                     /translation="MTAVPEQLRDAIADRYRIEEEIGRGGMAKVYLAEDLKHGRKVAI
                     KVLVPSGTQSYEPQRFLREIRIAARLSHPQILPVHDSGECDGLLYFVMPYAGCETLRD
                     RLNREGPLPIDVSLRITRAVAAALGYAHRHQVIHRDIKPENILLQEGEPVVADFGVAT
                     AMSAAGGDNVYITDRGFAVGTPAYMSPEQASAERDLDGRSDLYSLACVLYEMLSGRPP
                     FAGSGARATMVRHAIEQPGPIRTLRPTVPLAVD"
     gene            complement(892..>1107)
                     /locus_tag="VFD73_25570"
     CDS             complement(892..>1107)
                     /locus_tag="VFD73_25570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77349.1"
                     /translation="IPKVAVPKLFLHAVADEVIPIAHGLRLFQAAAPPKTFVELRGTH
                     SDAFEVDSTTYFGSIRHFVGTLSPLRD"
BASE COUNT          212 a          346 c          347 g          202 t
ORIGIN      
        1 ggtccaccgc cagcggcacg gtgggacgga gcgttctgat aggccccggc tgctcgatgg
       61 catggcggac catggtggcg cgtgcgccgg aaccggcgaa gggcggcctg ccgctcagca
      121 tctcgtacag cacgcacgcc aaactgtaga gatcacttct cccatccagg tcccgctcgg
      181 cgctggcctg ctcagggctc atgtacgccg gcgtcccgac ggcaaaccct cgatcggtga
      241 tatagacgtt gtcaccgcct gcagcggaca tggcggtggc cactccgaag tcggccacaa
      301 ccggctcacc ttcctggagc aggatgtttt ccggtttgat gtctcggtgg atgacctggt
      361 gccggtgagc gtagcccagc gctgcggcaa cggcgcgggt gatccgcagg gacacgtcga
      421 tggggagcgg cccctcccga ttcagccggt cgcgcagcgt ctcgcagccg gcatacggca
      481 tgacgaaata gagaagacca tcgcactcgc cggagtcgtg caccggcaga atctgaggat
      541 gagagagccg agcggcgata cggatttcgc ggaggaatcg ttgcggctca tacgactgag
      601 ttccactagg gaccaggacc ttgatggcga ccttccggcc atgcttgagg tcttccgcca
      661 gatacacttt ggccatacca ccccgtccga tctcctcttc gatccggtaa cggtccgcta
      721 tggcgtcacg cagttgttcg ggcacggcgg tcacacggct agatccccgg ctggtctgta
      781 tttgaaggga actcaccaga gaacgatcca caagctcgcc tggttcctga tcagcccgga
      841 tgatcggctt cccctgagct tgtcatcctg accccaacga aggaccggag ttcaatcccg
      901 tagaggcgag agcgtcccaa cgaagtgccg gatgctgcca aaatacgtgg tggaatccac
      961 ctcaaatgcg tcgctgtggg tgcctcgcaa ttctacaaac gtcttcggcg gcgcagccgc
     1021 ctggaacagg cgcagaccgt gggcgattgg aatgacttcg tcagccacgg cgtggaggaa
     1081 caacttcggt accgccacct tggggat
//
LOCUS       DASRPQ010002260         1508 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_270202, whole genome shotgun sequence.
ACCESSION   DASRPQ010002260 DASRPQ010000000
VERSION     DASRPQ010002260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1508
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_270202"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..234
                     /locus_tag="VFD73_25575"
     CDS             <1..234
                     /locus_tag="VFD73_25575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77350.1"
                     /translation="SAPPNALGALSMPQLLWHRTSDSLAGHVSRYVRLTAFSFLILIG
                     RFVTLEGMKIRSVTPMHHLMCMGSPATPALGRR"
     gene            240..515
                     /locus_tag="VFD73_25580"
     CDS             240..515
                     /locus_tag="VFD73_25580"
                     /inference="COORDINATES: protein motif:HMM:NF020332.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase domain-containing protein"
                     /protein_id="HZI77351.1"
                     /translation="MAVVATLSKGYDLDYIWKQVDLGPAKDAASYYIQASESGGEPPG
                     RWWGPGARALGFDHGQRVEREPYDLLFGERKAPDGTQLGRHARSSAR"
     gene            493..756
                     /locus_tag="VFD73_25585"
     CDS             493..756
                     /locus_tag="VFD73_25585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77352.1"
                     /translation="MRAHQPGDAELAEQLWEKLEATWSQAWSANYAVLEFMQGTGLTR
                     FAPVKPQHWVVASFEHHTSPHGLPRPHIHNIALPRLTTAVNTR"
     gene            1192..>1508
                     /locus_tag="VFD73_25590"
     CDS             1192..>1508
                     /locus_tag="VFD73_25590"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HZI77353.1"
                     /translation="MSLLEVSAETGNLGPVIVLAGDADGSSATQLDEVLTSVVSGRTV
                     HLTIDATNLRSVDPATAQTLTLAALIVMVQGGSTVLVNPREPVLKMLNHTRATEMFTI
                     QSRT"
BASE COUNT          290 a          515 c          449 g          254 t
ORIGIN      
        1 agcgctccgc caaatgcctt aggcgcgctg tcaatgcctc aacttctctg gcacaggaca
       61 tcagattcgt tggcaggaca cgtgtcacgt tatgtccgtt taacagcgtt ctcgtttctg
      121 atcttgatcg gccgttttgt cacccttgaa ggcatgaaga tcagaagcgt cacacccatg
      181 caccatctga tgtgtatggg tagtcctgcc acgcccgcgc tggggaggcg ctgagcgtaa
      241 tggcggttgt ggcgacgtta agcaagggct atgaccttga ctacatctgg aaacaggtgg
      301 acctcggccc ggccaaggac gcagccagct actacatcca ggccagcgag agcggaggtg
      361 aaccgccggg acgctggtgg ggccccggcg ccagagcgct gggcttcgac catggccagc
      421 gggtcgagcg cgaaccgtat gacctgctgt tcggcgagcg taaagctccc gacggcaccc
      481 aactcggccg ccatgcgcgc tcatcagccc ggtgacgctg agctcgccga gcaactctgg
      541 gaaaagctcg aggccacctg gtcgcaggcc tggtcagcga actacgcagt gctcgagttc
      601 atgcaaggca cgggcctgac caggttcgcg ccggtcaagc cccagcactg ggtggtcgcc
      661 tccttcgagc accacaccag ccctcacggc cttccccgcc cccatatcca caacatcgcc
      721 ctccccaggt tgaccacggc ggtgaacaca cgctgacctg gtgcccggtg acacgcatct
      781 tggcccggcg aggcgacctc gggccgccaa cggctgcagc ccttgcccgg acccgtcttc
      841 gaagcagatt cacgccccgg tcgccgccat gcgcgcctcg gctgccctgg gctcccatgc
      901 acacgcacta ggctgcaccg ttcgaccgcg agcaggaccg taccgctcgt ttgcatccag
      961 aagacaagtc tccgtagacc agacgcggac cgaacgccag gtctgttcct gatcctcgca
     1021 gctgagcaca ctgccgacct acggactccg gagccgtaag tccggaggtc tcgcggcgaa
     1081 ccttcacgcc gctgagaacg gcaacgccca cctgggtgat catgcctgac aggccccgct
     1141 attcttaaag aatgctaaat cttactaaaa gcgcggcgtg agaggtcccg gttgagcttg
     1201 ctggaagtat ccgccgagac cgggaacctc ggcccggtca tcgtcctggc tggcgatgcc
     1261 gacggctcat ccgccacgca gctagacgaa gtgctcacct ccgtggtgtc aggccggacc
     1321 gtgcacctga ccatcgacgc gacgaacctg cgctccgtcg acccggccac ggcacagacg
     1381 ctgactctgg ccgcgctgat cgtcatggtc cagggcggga gcacggtgct ggtgaacccg
     1441 cgggagcccg tactgaagat gctgaaccac acacgcgcaa ccgagatgtt cacgatccag
     1501 agccggac
//
LOCUS       DASRPQ010002261         1775 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1538298, whole genome shotgun sequence.
ACCESSION   DASRPQ010002261 DASRPQ010000000
VERSION     DASRPQ010002261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1775
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1538298"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1775
                     /locus_tag="VFD73_25595"
     CDS             <1..>1775
                     /locus_tag="VFD73_25595"
                     /inference="COORDINATES: protein motif:HMM:NF012239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HZI77354.1"
                     /translation="EGHVLGKLLTRKGVLSQREQDLRAREQELLQRLATALEQFGHDV
                     AEDDLRRFHEARQQLDGLFLLVIAGEFNSGKSSVINALLGERVLPEGVTPTTDRINVL
                     RHGTIVSEQLREAYLLDRTHPAEVLREINIVDTPGTNAIIRRHEELTRDFIPRSDLVL
                     FVTSADRPFTESERTFLEQIREWGKKIVFIVNKIDILTRPEERDQVIRYVAENATGLL
                     GEKPQIFAVSARNAQAARADESPDSEQQWTASGFDQLEEYLLHTLDQEERVRLKLLNP
                     LNVGLRLASKYKQATFDRLKLLAQDVEALQNIDQQLALFHQEMLRDFEPRLGRLDLLL
                     SDMERRGSRFFEETIRIGRIRSLMDSEAVKRSFEQEVIGETPREIEAEVSRVIDWIVE
                     RNHKLWQDINAYIDRRQLSRHRDGMIGEVGPSFGYNRQALLDSIGRVSSEVLGSYNRD
                     AESRSIANHIQGAFASTALAEAGAIGLGTIVVTVVTGAAADLTGILLAAALAVGGFYI
                     LPRKRRQAQRDLQRRIAQLRTQLKDALTRQVHLELEQSTGRINEAIAPYRRFVQTHQQ
                     QLNDARGELVATEDALLRLRAEVDKL"
BASE COUNT          378 a          526 c          556 g          315 t
ORIGIN      
        1 gagggtcacg tgctcggcaa gctgctaacc cggaagggcg ttctctccca gcgcgaacag
       61 gatctccgcg cccgagagca ggagttgctg cagcgcctcg cgacagctct cgagcagttc
      121 ggtcacgatg ttgccgagga cgatctgcgc cggttccacg aggcccggca gcagttggat
      181 ggtctcttcc tcctggtgat cgccggcgaa ttcaattcag gaaaatccag cgtcatcaac
      241 gcgcttctgg gcgagcgggt gttgccggaa ggggtcacgc caacgaccga ccggatcaat
      301 gtgctacgtc atggcactat cgtgtccgaa cagttacgag aggcctacct gctggatcgg
      361 actcatcctg ccgaggtact gcgggaaatc aatatcgtcg acactccagg caccaacgcc
      421 atcattcggc ggcacgaaga gctcacccgc gacttcattc cccgctcgga tctggtgctc
      481 ttcgtcacct ccgccgaccg gcccttcacg gaaagcgagc ggacattcct ggagcagatc
      541 agggaatggg gcaagaagat cgttttcatc gtgaacaaga tcgatatcct cacccggccg
      601 gaggagcgcg atcaggtcat ccggtatgtg gccgagaacg cgaccgggct gctgggggaa
      661 aagccgcaaa ttttcgccgt gagcgcccgg aatgcgcagg cagctcgagc cgacgaatcg
      721 ccggactcag agcagcagtg gaccgcaagc gggttcgatc agctggaaga gtatctgctt
      781 cataccctgg accaggagga acgggtccgg ctcaagctgc tcaacccgct caatgtcggc
      841 cttcggctcg cctcgaagta caagcaggcg acgttcgatc gactgaagct gctggctcag
      901 gacgtcgagg ccttgcagaa catcgatcag cagctcgcac tcttccacca ggagatgctg
      961 cgagacttcg agcccagatt gggtcggctc gacctgttgt tgagtgacat ggagcgacga
     1021 ggatctcgct tcttcgaaga gaccattcgg attggccgga ttcggagcct gatggatagc
     1081 gaagccgtta agcggtcgtt cgagcaggaa gttatcggcg aaacaccaag ggaaatcgaa
     1141 gccgaagtca gccgagtcat cgactggatc gtggaacgaa accacaagct ctggcaggac
     1201 atcaacgcgt acatcgatcg acgccagctc agcagacacc gggatgggat gatcggcgag
     1261 gtggggccca gcttcgggta taaccggcag gcactgctgg attcgatcgg ccgggtttcc
     1321 agcgaggtgc tgggcagtta caaccgggac gcggagtccc ggagcatcgc caaccacatt
     1381 cagggtgcct tcgccagcac ggctctggcg gaggcgggag cgataggtct gggcacgatc
     1441 gtcgtcactg tggtcaccgg agcggctgcc gacctgaccg gcatcctctt ggccgcggct
     1501 cttgccgtcg gcgggttcta cattcttccg cgaaaacggc ggcaagcgca gcgggatctc
     1561 cagcgacgga ttgctcagct cagaacccag ctcaaggatg cactgacccg ccaggttcat
     1621 cttgagctgg aacagtccac gggccggatc aatgaagcta ttgcgcccta ccgccggttc
     1681 gttcaaaccc accagcagca actcaatgac gcgcgcgggg agttggtggc aacggaggat
     1741 gcacttctcc gcctgagggc cgaggtagac aaact
//
LOCUS       DASRPQ010002262         1110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1196890, whole genome shotgun sequence.
ACCESSION   DASRPQ010002262 DASRPQ010000000
VERSION     DASRPQ010002262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1196890"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..404)
                     /locus_tag="VFD73_25600"
     CDS             complement(<1..404)
                     /locus_tag="VFD73_25600"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HZI77355.1"
                     /translation="MLIGNTILIGILRTPGDVAAQLPHPALFIGIWILGGVYALIGAA
                     SLAEPGAMFGRSAGQYVIVRRGLGEYPAFMVGWSDWISTCGPVALGGMVFMEYLEPLV
                     PGLSGWKVAGGVALVLLFGLLLWRGIKIGDLS"
BASE COUNT          242 a          336 c          347 g          185 t
ORIGIN      
        1 tgggagagat cgccgatctt gatcccgcgc cagaggagca gcccgaacag cagcacgaga
       61 gcgacaccgc cggcgacctt ccacccgctg agcccgggca ccagcggctc gagatattcc
      121 atgaacacca tgccgcccag cgcgacgggg ccgcaggtgg agatccagtc gctccagccc
      181 accatgaaag cgggatactc gcccagtccc cgtcgcacga tgacgtattg tcccgccgac
      241 cggccgaaca tggcgccggg ctcggccagc gatgcggcac cgatcagcgc gtagacaccg
      301 cccagaatcc agatgccgat gaagagcgcg ggatggggaa gctgggccgc gacgtcgccc
      361 ggggtgcgga gaatgccgat caggatggta ttcccgatca gcaccgcgat gccgaaggag
      421 aggccgagga ctcggcgcag gcggcctcga cctgcgggaa tcgcttcggc tcttccgatg
      481 ctgtgatcta tgctttcgga tgtatcggtc agctcgaaat tccaaggaag ggctggtcta
      541 taggctacag gctgccgctc gaaatcgcta ctaccgacgg catatggggg gtgtcgtgcc
      601 cagcgtcact gaactttctg cagccttaga taggatagag gatcaccgta gcagaggtcc
      661 gtatgcgaag ttcgttagga atcctcgtcc tgctgttcgt cggcgcctgt gctagtgaca
      721 gcaacatcac aaatccacca ggtgcactat cgtttacact gacagtgaac agaagtggca
      781 ccgggtccgg gcacgtggtt actccgcagg gcacgagccc ggcaatcgat tgcctgttgg
      841 gtgtcgacgc cagcaccagc ggggtctgtt cagcagcgta ccccgagagc acctcggtga
      901 gcatcacggt tactcccgat accgggacga cgttcactgg ctggggcaga gacgcgagta
      961 gctgcggggc agcaactact tgctcaattg tcatgagtca aaacaaaacg gccaccgctc
     1021 agttcaccag aacccccaca aatccgacgc cctctatatc gatccgacta aggcggtaag
     1081 gcgggtaagc gggtaagcgg gtaagaggga
//
LOCUS       DASRPQ010002263         3519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4329327, whole genome shotgun sequence.
ACCESSION   DASRPQ010002263 DASRPQ010000000
VERSION     DASRPQ010002263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3519
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4329327"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..286)
                     /locus_tag="VFD73_25605"
     CDS             complement(<1..286)
                     /locus_tag="VFD73_25605"
                     /EC_number="2.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-guanine transglycosylase"
                     /protein_id="HZI77356.1"
                     /translation="MFEFRVDGTVGAARAGTLTLPHGQVQTPAFMPVGTHAVVRGLSA
                     ADVRRTGAQIILGNTYHLHLRPGEEVIEKLGGLHRFTTWDRPMLTDSGGFQ"
     gene            complement(286..822)
                     /locus_tag="VFD73_25610"
     CDS             complement(286..822)
                     /locus_tag="VFD73_25610"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI77357.1"
                     /translation="MTFSNPAGKATASATSYVRSLLEVLGSRDPLDVLSELMPWLTVR
                     LRGVAEPVLRRPESPGKWSVIEVIQHLADSDLVASYRIKMVLTEDRPPLQGYDQDRWA
                     AELRYGEVPLGLALEQLTGLRAANLHLWKQLTPQQLERVGIHAERGPESVAHLLRLMA
                     AHDLVHRRQIERILVTAR"
     gene            complement(836..1888)
                     /gene="queA"
                     /locus_tag="VFD73_25615"
     CDS             complement(836..1888)
                     /gene="queA"
                     /locus_tag="VFD73_25615"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HZI77358.1"
                     /translation="MTPERLRTADFDYQLPAELIAQEPLPERGDSRLLVVHRNQTAVT
                     GPELEDSYFQQLVQLIPPGDLLVINTTRVRHARLLGTRPSGAPAEILLIHPGTDDTWI
                     AMGRPGSALRPGKRIALGPNAWVETVELASEGMRRVRFLGISAEEAMARYGKLPLPPY
                     IAREPNQLDDTRYQTVYAESEGSVAAPTAGLHFTPALLSSLRSAGVLIKSLDLQVGPG
                     TFKPVDVEDPTQHEMHPEQYHIPAELADVIAGVRQAGGRVWAVGTTVVRALESAVLPD
                     GSVRPGSAETRLLITPGYRFRAVDRLITNFHLPRSTLLMLVCAFAGRDRILAAYRHAV
                     AARYRFYSYGDAMVII"
     gene            complement(1878..2903)
                     /gene="ruvB"
                     /locus_tag="VFD73_25620"
     CDS             complement(1878..2903)
                     /gene="ruvB"
                     /locus_tag="VFD73_25620"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HZI77359.1"
                     /translation="MTRLEITTPEVLPEESSADAALRPSKLDEFVGQIQVKTSLQIAI
                     DAARGRREPLDHTLFFGPPGLGKTTLAMLIAREMGVQLRTTSGPVLEKPGDLVGLLTS
                     LGPGDVLFIDEIHRLRPVLEEFLYAAMEDFRVDVRIAEGPNAQTIPMTLEKFTLIGAT
                     TRFGLLTPPMRARFGIVERLSFYPPEELQQIVVRSAGIIGVPIDPHGAEEIARRSRGT
                     PRVANRLLRRVRDYAEVRADGRITAEVADAALGRLNVDEFGLDDMDARILTTIIEKFG
                     GGPVGLGTVAIAVGEDAGTLQDVYEPYLIQQGFLERTPRGRCATALAYRRFGLTPPPV
                     QATIFDA"
     gene            complement(2920..3096)
                     /locus_tag="VFD73_25625"
     CDS             complement(2920..3096)
                     /locus_tag="VFD73_25625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77360.1"
                     /translation="MTVAATTAEWICTRCGATNRKLVPLRTTQAEDRCVTCHAPHIVE
                     VGERPVRWTARLEK"
     gene            complement(3098..>3519)
                     /gene="ruvA"
                     /locus_tag="VFD73_25630"
     CDS             complement(3098..>3519)
                     /gene="ruvA"
                     /locus_tag="VFD73_25630"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00084.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HZI77361.1"
                     /translation="LYGLDSAVERQIFRYLLTASGFEPKLALALLYALGPERTVRRIQ
                     ARDLSALSSVSGIGRKKAERLVLELQERFSDLVVDSRGPRLEGSEEAVRALMGLGYGV
                     AAADDAVRAALAAGAPQDTPQLIRRALQQLATSKASS"
BASE COUNT          640 a         1121 c         1137 g          621 t
ORIGIN      
        1 cctggaatcc cccggaatcc gtcagcatcg gccggtccca ggtggtgaag cgatgcaggc
       61 ctcccagttt ctcgatcacc tcctcacccg gccggagatg caggtgatag gtattgccca
      121 ggatgatttg ggcgccggtg cgccgcacat ctgccgcgct caggccccgc accaccgcgt
      181 gggtgcccac cggcatgaac gcgggcgtct gcacctggcc atgcggcaga gtgagcgtgc
      241 ctgcccgggc cgcacccact gtcccgtcga cccgaaattc gaacatcagc gggcggtgac
      301 caggatcctt tcgatctgcc gccggtgcac cagatcgtgg gcggccatca atcggagaag
      361 gtgcgcaacg ctttcgggcc cgcgttcggc atggatgccg acccgctcga gctgctgggg
      421 agtgagttgc ttccacaggt gaaggttggc cgcgcgaagg ccggtgagct gttccagggc
      481 cagtccgaga ggtacttctc cgtacctcaa ctctgcggcc cagcggtcct ggtcgtagcc
      541 ttgaagcggt ggccggtcct cagtcagcac catcttgatg cgatagctgg ccaccaggtc
      601 gctatcggcg aggtgctgga tgacctcgat cacagaccac ttccccggcg attccggccg
      661 gcgaaggacc ggctcagcga caccgcggag gcggactgtg agccagggca tcagctcgct
      721 caacacgtcc agcgggtccc gcgagccgag cacttccaac agcgagcgca cgtagctggt
      781 cgccgacgcg gttgcttttc cagcgggatt ggagaaggtc atcacatttc tatcatcaga
      841 tgatcaccat ggcgtcgccg taagaataga agcggtagcg ggcggcaacg gcatggcggt
      901 acgcggccaa aatgcgatca cgccccgcaa acgcgcacac gagcatcagc agcgtcgagc
      961 ggggcagatg aaaattggta atcaaacgat caaccgcgcg aaatctatag ccgggagtga
     1021 tcaacagtct cgtctcggct gatccgggcc gcaccgagcc gtcgggaagc acagcgctct
     1081 cgagggcacg gacgacggtg gtgccgactg cccagacgcg gccgcccgcc tggcggaccc
     1141 cggcgatcac gtcagccaac tccgctggaa tgtggtactg ctcgggatgc atttcgtgtt
     1201 gcgtgggatc ttcgacatcc accggcttga aggtgcccgg tccgacctgc agatccagac
     1261 tcttgatgag gactcccgcg gaccgaaggc tgctgagcag cgcgggggta aaatgaagcc
     1321 cggcagtcgg ggcggcgaca ctgccttcgc tctcggcgta caccgtctgg tagcgagtgt
     1381 catccagctg gttcggctcc cgggcgatat aaggcggcag cggcagcttg ccgtaccgag
     1441 ccatcgcctc ctccgcgctg ataccgagaa atcgcacccg gcgcattccc tcgctcgcca
     1501 gttcaaccgt ttcaacccag gcattcggac cgagagcgat tcgcttgccg ggacgcagcg
     1561 cgctccccgg tctccccatg gcaatccagg tatcgtccgt gccgggatga atcaggagga
     1621 tttccgctgg agctcccgaa ggtctggtcc ctaggagccg agcgtggcgt acccgggtcg
     1681 tgttgatcac gagcagatcg cccggaggga tcagttggac aagctgctgg aagtatgaat
     1741 cctccagctc gggtcctgtg actgcagtct gattgcggtg gactaccagg aggcggctgt
     1801 cgcctcgctc ggggagaggc tcctgggcaa taagctcggc ggggagttga tagtcgaagt
     1861 cagcggtgcg gagacgctca ggcgtcaaag atcgtggctt ggaccggggg aggagtgagg
     1921 ccgaaccggc ggtacgcaag tgcggtggca cagcggccgc gtggggtacg ttccagaaaa
     1981 ccttgctgga tgagatacgg ctcatagacg tcctgcagag ttccggcgtc ctcacccacc
     2041 gcaatggcga cggtgcccag gccgaccggc ccgccgccga acttctcgat aatggtggtg
     2101 agaatacgag catccatgtc gtctaacccg aactcatcca cattgagccg gccgagcgcc
     2161 gcatcggcca cctctgcggt aatccgcccg tcggcccgga cttcagcgta gtcgcgcacc
     2221 cggcgcagca gtcgattggc tactcgcggc gtgccccggc tgcgtcgggc aatctcctct
     2281 gcgccgtgcg ggtcgatggg caccccgatg atcccagctg agcggaccac gatctgttgc
     2341 agctcctccg ggggataaaa gctaaggcgc tccacgatgc cgaagcgggc ccgcatcggt
     2401 ggggtgagca agccaaaccg ggtcgttgcc ccgatgagag tgaacttctc cagggtcatc
     2461 gggatggtct gcgcgttggg gccctcggcg atccggacgt ccactcggaa atcttccatg
     2521 gccgcgtaga ggaattcctc cagcacggga cgcagccggt ggatttcatc gatgaacaac
     2581 acgtctccgg ggccgagcga cgtcagcaag cccaccaggt cacccggttt ttccagcacc
     2641 ggaccggacg tcgtccgcag ctgaacgccc atttcccgag cgatgagcat ggctagagtg
     2701 gttttgccga ggccgggagg gccgaagaag agcgtatgat cgagtggctc ccgtcttccc
     2761 cgggcagcat cgatggcgat ctggagcgag gtcttgacct ggatttgacc tacgaactca
     2821 tccagcttgg acggcctgag agccgcgtcc gcgctgcttt cttccggcaa gacttcagga
     2881 gtggtgatct cgagtcgggt catgctggaa agtaacctct cacttctcga gccgtgccgt
     2941 ccatcgcacc gggcgctcac cgacctccac gatgtgcggc gcatgacagg tgacacatcg
     3001 gtcttccgcc tgggtcgtgc gcagagggac aagcttccga ttggtcgcac cgcagcgggt
     3061 gcagatccac tcagcggtgg tggcggcgac cgtcatatca gctactcgct ttgctggtcg
     3121 ccaattgctg gagcgcgcgg cgaatcagtt gaggggtatc ctgcggggca cctgccgcaa
     3181 gcgcagcccg cactgcatcg tcggcggcgg caacgccgta gcccagtccc atgagtgccc
     3241 gtaccgcctc ttccgatcct tccagacggg gacctcggga atcgacgacc agatcgctga
     3301 atcgctcctg cagctccagc accagccgtt ccgccttctt ccgacctatg ccgctgaccg
     3361 agcttagcgc cgacagatcg cgtgcctgaa tgcggcgcac cgtgcgttcg ggcccgagtg
     3421 cgtacaggag cgccagggcc agcttgggct cgaaaccgct tgcggtgagc agataacgga
     3481 agatttgtcg ctcgacggcg ctgtctaacc cgtacagcg
//
LOCUS       DASRPQ010002264         1258 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4024571, whole genome shotgun sequence.
ACCESSION   DASRPQ010002264 DASRPQ010000000
VERSION     DASRPQ010002264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1258
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4024571"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..408)
                     /locus_tag="VFD73_25635"
     CDS             complement(<1..408)
                     /locus_tag="VFD73_25635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77362.1"
                     /translation="MPPLDVSRATNPPGDWEAFARAHGSFYHLPQWAECLQRIYRLPM
                     EFYSARTGDQLRGLLALAEVPPLLGPRRLVSLPFSYAAGPLALDVAAADALSAAAREQ
                     AHDRGIRRVEIKSRGQFPPAPGFQRTSHYATYEI"
     gene            complement(389..>1258)
                     /locus_tag="VFD73_25640"
     CDS             complement(389..>1258)
                     /locus_tag="VFD73_25640"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HZI77363.1"
                     /translation="AAIREMRPDVIHAHWWFPAGWFVRHADVPYVITCHGSDVRLLSK
                     GSMVRLAARRVFTRATTVSTVSQFLAREVEHSLPGAARNLVVAPMPVDVERFTQASAR
                     EKADPPRILFAGNLLPSKGVDLLIRAAAELTRRGIPYQLKVLGEGPSLGSLRALAEQL
                     GIAEQVTWSPFVSQTEMPAEYAASTITVLPTRGQAEGLGLTLVEALLAGSAIVGTPAG
                     GIPEVVQHEVTGLLARPDDPIDLANQLERLLTDTALRKRLMLAGKDYALRTYSPETTV
                     ARFLEIYHAAARR"
BASE COUNT          242 a          400 c          408 g          208 t
ORIGIN      
        1 aatctcgtac gtggcgtaat gagaggtccg ctggaatccc ggcgccggag ggaattggcc
       61 gcgggatttg atctcgaccc ggcgaatgcc ccgatcgtgc gcctgctccc gcgctgctgc
      121 tgacagcgca tcggcggcgg ccacgtccag ggctaagggg ccggcggcgt agctgaacgg
      181 caggctgacc agccgacgag gaccgaggag tggaggaacc tcggccagcg ccaagagccc
      241 ccgaagctga tcgccagtcc gggccgagta aaactccatc ggcagtcggt agatccgctg
      301 aaggcactcc gcccactgag gcagatggta gaagctccca tgggcccggg cgaatgcttc
      361 ccaatcgccc ggcgggttcg tggcgcggct aacgtcgagc ggcggcatga tagatctcca
      421 ggaaccgcgc cacagtggtc tcgggagagt acgtgcgaag cgcgtagtcc ttccctgcca
      481 gcatcagacg tttgcgtaag gctgtgtcgg tcaggagccg ctcgagctga ttcgccaggt
      541 caatgggatc atctggccga gcgagcagtc ccgtcacctc gtgctgaacc acttccggta
      601 ttcccccggc cggcgttccg acaatggcgg agccagccag gagagcctcg accagggtca
      661 agccgagccc ttccgcctga ccgcgagtag gcagcaccgt gatggtgctg gctgcgtatt
      721 ctgccggcat ctctgtttgg ctcacgaacg gtgaccaggt cacctgctcc gcgatgccca
      781 gctgctcagc cagagcgcgc aaggaaccga gagatggacc ctcacccaag accttgagct
      841 gatagggtat gccccttcgc gtcagctcgg cggcggcgcg aatgagcaga tccacaccct
      901 tggaaggcaa cagatttccc gcgaacagaa ttctcggtgg atccgctttc tctcgggctg
      961 acgcttgcgt gaatcgctcc acgtcaaccg gcatcggtgc caccaccagg tttcgagcag
     1021 cgcccggaag ggagtgttcc acctcacggg caaggaattg ggagacggtg ctgacggttg
     1081 tcgctctggt aaagaccctc cgcgcggcca gccgcaccat cgatcccttg gagaggagtc
     1141 gcacgtctga tccatgacag gtgatcacat aggggacatc cgcgtgccgg acgaaccagc
     1201 cggcgggaaa ccaccagtgc gcgtggatga catcgggacg catctcgcga atcgccgc
//
LOCUS       DASRPQ010002265         1086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1197031, whole genome shotgun sequence.
ACCESSION   DASRPQ010002265 DASRPQ010000000
VERSION     DASRPQ010002265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1197031"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..264)
                     /locus_tag="VFD73_25645"
     CDS             complement(<1..264)
                     /locus_tag="VFD73_25645"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HZI77364.1"
                     /translation="MITLYVLGSGSRGNCCAVEAEGTAVLIDAGFSRREVERRAEAVG
                     LDLNRIAAIALTHEHGDHACGAAVLARRLGVPVLTAQGTWQRLA"
     gene            complement(261..>1086)
                     /locus_tag="VFD73_25650"
     CDS             complement(261..>1086)
                     /locus_tag="VFD73_25650"
                     /inference="COORDINATES: protein motif:HMM:TIGR03991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77365.1"
                     /translation="WRGRHENGPTLAIDGIPLRGTFDLLTALEQLLSADCADFFAAPH
                     QGVPEASIVLGNSAHVIVLGATVEPGVVFDVRHGAVVVDQGAEIRSGSRLEGPLYVGP
                     GTKVLGGFLRTSVFGPECRVHGEVSTSVFHGFANKSHDGFVGHSVVGQWVNLGAGTTT
                     SNLKNTYGPVRLELNGARIETGRMNVGSLIGDHVKIAIGSMLASGTVISSGANVFGVT
                     IPPKYVPPFAWGCAGSERMSEDGFLRVAERVMGRRNVAFSPARRESLRLAYQRSIR"
BASE COUNT          218 a          374 c          300 g          194 t
ORIGIN      
        1 ggccagtcgc tgccaggtcc cctgtgcggt cagcactggc actccgagcc gccgtgcaag
       61 gaccgccgct ccgcaggcat ggtcgccatg ctcgtgagta agggcgatcg ccgcgatccg
      121 gttcaggtcc aggccgactg cttcagcccg gcgctccact tctcggcggc tgaaccccgc
      181 atcgatcaac acagccgtcc cttctgcctc aacggcgcag cagtttcccc gggagccgga
      241 acccaggacg tacaacgtga tcaccggata ctccgctggt acgccagccg gagcgactcc
      301 cgccgtgccg gagagaatgc cacgttgcga cgtcccatga ctctttccgc cacgcggaga
      361 aagccatctt cactcatccg ctcgctcccg gcacagcccc aggcaaaagg aggcacgtat
      421 ttcggtggga ttgtcacgcc gaacacgttt gctcctgagg agatcactgt tccggatgcc
      481 agcatcgagc cgatagcgat cttgacatga tcgccgatca gactccccac gttcattctc
      541 ccggtctcga tgcgggcccc gttcagctcg agtcggactg gtccataggt gttcttcaaa
      601 ttcgaggtgg ttgttccagc gccaagattg acccattgac ccacaacact gtgtccaacg
      661 aagccgtcgt gactcttgtt ggcaaaccca tgaaacacac tggtggagac ttcgccgtgg
      721 acccggcact cgggtccaaa cactgaagtc ctcaggaaac ctccgagcac cttggtcccc
      781 ggcccgacat agagcggtcc ctctaggcga ctcccgcttc ggatctccgc tccctgatcc
      841 accaccacag cgccatgacg tacatcgaac accacaccag gctcgacggt ggctcccaga
      901 acgatcacgt gagccgagtt tcccaacacg atgctcgctt cgggaactcc ctgatgcggg
      961 gcagcgaaga aatcggcgca atcggccgag aggagctgtt ccagcgcggt gagcagatca
     1021 aaggtgccgc ggagcggaat accatcgatt gcgagagtcg gcccattctc gtgccgacca
     1081 cgccag
//
LOCUS       DASRPQ010002266         1744 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_270494, whole genome shotgun sequence.
ACCESSION   DASRPQ010002266 DASRPQ010000000
VERSION     DASRPQ010002266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1744
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_270494"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..581)
                     /locus_tag="VFD73_25655"
     CDS             complement(<1..581)
                     /locus_tag="VFD73_25655"
                     /inference="COORDINATES: protein motif:HMM:NF024912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77366.1"
                     /translation="MCGIAGKAGAAPVAEAEILRMCNAIAHRGPDDWGTFVEGGVGLG
                     MRRLSIVDLAGGHQPMSNEDGSVVVVFNGEIYNFPSLHDEIVAKGHRFKTRCDTEALV
                     HLYEEYGEGMVARLRGMFAFAIWDRSRRRLLLARDHFGQKPLFYTERAGQLTFASEIK
                     ALLADDPSLAELSPRALDQYLTMRFVHAPETFFS"
     gene            complement(583..1392)
                     /locus_tag="VFD73_25660"
     CDS             complement(583..1392)
                     /locus_tag="VFD73_25660"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZI77367.1"
                     /translation="MAEPWQLQLYKRSLKKKETVEALMDHLPPAAGRFCLEVGCGTGL
                     TSHFLRERGGTWVSTDFERDHVRSAKQLVGDRVLQTSDAELPFRSSAFDLVAAINFLE
                     HIEDDDTFFREMVRVLKPGGDFLFMAPKGEAGRPGYALKRVLGFTADQEGFGHARDGY
                     PPAAVRSLFQRHGLELTGMQDYCRFFTESIEDLLNYAYHRKSMQGKETEQQDFHGDTA
                     PMSAEALNKVGTAYKLYSALYPALRAWTMLDHLIPFSSGYMMVAWGRKKAA"
     gene            complement(1476..>1744)
                     /locus_tag="VFD73_25665"
     CDS             complement(1476..>1744)
                     /locus_tag="VFD73_25665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77368.1"
                     /translation="VARATGSKRYGFRLPLAPMLTVAAVVEDACAALKIDPPIYRRRM
                     DFFHSDSEFDTSRARHVLHWEPKIDLREGIRRTLEDYRQSGALG"
BASE COUNT          345 a          556 c          509 g          334 t
ORIGIN      
        1 gagaaaaacg tctccggcgc gtgcacgaag cgcatcgtga ggtactggtc gagggcgcgg
       61 ggagagagct cagcgagaga gggatcgtcg gccagcagcg ccttgatttc cgaagcaaac
      121 gtgagctgtc cggctcgttc ggtatagaac agcggcttct gcccaaagtg gtcacgagcc
      181 aggagcagac gccggcggct ccggtcccag atggcaaagg cgaacatgcc gcggagccgg
      241 gccaccattc cctctccata ctcctcgtag agatggacca gcgcctcggt gtcacagcga
      301 gtcttgaagc ggtgcccttt ggccacgatc tcgtcgtgca aactgggaaa gttgtagatc
      361 tcgccgttga agacgacgac cacgctgccg tcctcattgg acatcggctg gtgcccgccg
      421 gccaggtcga caatgctgag ccgccgcatc ccgagaccga ctccgccttc gacgaaggtg
      481 ccccagtcat ccggcccccg gtgcgcaatc gcattgcaca tccgaaggat ttcggcttca
      541 gcgacgggag ccgctcccgc cttacccgca atgccacaca tctcaggccg ccttttttct
      601 tccccaggcc accatcatgt acccggaaga aaacggaatg aggtgatcca gcatggtcca
      661 agcccgcagg gccgggtaca gtgctgaata cagcttatat gcggttccca ccttgttcag
      721 tgcttcagcc gacatgggcg cggtgtcgcc gtggaagtcc tgctgctcgg tttccttccc
      781 ctgcatcgat ttccgatggt aggcgtagtt gagcagatct tcgatcgact cggtaaagaa
      841 ccggcaatag tcctgcatgc cggtcagctc cagcccatga cgctgaaaga gagatcgcac
      901 tgccgccgga gggtatccgt cccgcgcatg accgaacccc tcctggtctg ctgtgaaccc
      961 gagcacccgt ttgagagcgt atcccggccg acctgcctca cccttgggcg ccatgaacaa
     1021 gaagtcgccg cccggcttca gcacccgcac catttcccgg aaaaaggtgt cgtcgtcctc
     1081 gatgtgctcc agaaaattga tggcggccac cagatcgaat gccgaggagc ggaacggcag
     1141 ttcggcgtcg ctggtctgga gcacgcggtc gccgaccagc tgtttggccg atcgcacatg
     1201 atcccgctcg aaatcggtac tgacccaggt tccacctcgc tctcgcaaaa aatgcgaggt
     1261 caaccccgtc ccgcagccga cttccaggca gaagcgacca gcggccgggg gcaggtggtc
     1321 catcagcgcc tcaaccgtct cttttttctt caacgaacgc ttatagagct gcagttgcca
     1381 cggttcagcc aagatcaatc tccttcgttg cagttgtcag ccggagcgag cgggttgcca
     1441 atcggtcgct ttgctcagga tgacaacgat cgcttctacc caagcgcacc gctttgtcta
     1501 tagtcctcaa gggtccgccg gattccctct cgcagatcta tcttgggctc ccagtgaagc
     1561 acgtgacgcg cccgtgaagt atcgaactcc gaatcgctgt ggaagaaatc catgcggcgg
     1621 cgatagatgg gaggatctat cttgagcgcg gcgcaggcgt cttccaccac ggcggccact
     1681 gtgagcatcg gcgccagtgg gagccggaaa ccgtatcgct tgctgccggt ggcccgcgcg
     1741 actt
//
LOCUS       DASRPQ010002267         1164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_889231, whole genome shotgun sequence.
ACCESSION   DASRPQ010002267 DASRPQ010000000
VERSION     DASRPQ010002267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_889231"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1164
                     /locus_tag="VFD73_25670"
     CDS             <1..>1164
                     /locus_tag="VFD73_25670"
                     /inference="COORDINATES: protein motif:HMM:TIGR01733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid adenylation domain-containing
                     protein"
                     /protein_id="HZI77369.1"
                     /translation="SEGQELSYGELARQAAQLAQVLRAQGAHANSLVGILEEKGVGQV
                     VAVLGTLMSGAAYLPLDPESPELRWGRLLEQAHVQLLITERDEDEAWWPAGVQRMSLA
                     EVRRGPEAEANWRELATKGVGEDLAYVMYTSGSTGEPKGVMVSHRGLVNALAWSREHF
                     ALRRDDRAIAITALHHDMSVFDLLGVLGAGGTLVIPEGWAKLEPRRWVELLREHDVTI
                     WNSVPAYMQMLVQYLEQEQGEAGSLRLVILGGDWIGVKLPEQVWRQWPGAQVVSVGGP
                     TETTLWNIYHEVGPGESEGRSIAYGKPIANNRYYILDELLRERPVGVVGEMYCGGVGV
                     SPGYWQDEERSRERFIEHPESGERLYRTGDLGRYLSGGAIEFMGRADDQVQVG"
BASE COUNT          236 a          255 c          478 g          195 t
ORIGIN      
        1 tcagcgaagg gcaagagcta agttacggag agctcgcgcg gcaggcggcg caattggccc
       61 aggtcctacg cgcgcaggga gcgcacgcaa acagtctggt ggggattctg gaggagaagg
      121 gcgtgggcca ggtggtggcg gtgctgggga cgttgatgtc tggagccgct tacctgccgc
      181 tggacccgga gagtccggag ttgcgctggg gccggttgct ggaacaggcg cacgtgcagt
      241 tgctgatcac ggagcgagat gaggatgagg cgtggtggcc ggcgggtgtg cagcggatga
      301 gccttgcgga agtaagacga ggaccggagg cggaagcaaa ctggcgtgag ctcgcgacga
      361 agggcgtggg tgaagatctg gcctacgtga tgtacacgtc gggatcgacg ggagagccga
      421 agggagtgat ggtgagccac cgcggactgg tcaatgcgtt ggcgtggagc cgggagcatt
      481 ttgcgctgag gcgtgatgat cgagcgatcg cgatcacggc gttgcatcac gacatgtcgg
      541 tgttcgacct gctgggagtg ttgggagcgg gaggcacact cgtgattccg gagggctggg
      601 cgaagctcga accgcggcgc tgggtggaac tgctgcgcga acatgacgtg acgatctgga
      661 acagcgtgcc agcctacatg cagatgctgg tgcagtacct ggagcaggag cagggcgagg
      721 cgggaagttt gcggctggtg atcctcggtg gagattggat cggagtgaag ctgccggagc
      781 aggtgtggcg gcagtggccg ggagcgcagg tcgtgagcgt gggtgggccg acggagacga
      841 cgctgtggaa catctatcac gaagtaggac caggcgagag cgaggggcgg agcatcgcct
      901 acgggaagcc gatagcgaat aaccggtatt acattttgga cgaactgctg cgagaacggc
      961 cggtgggagt agtaggtgaa atgtattgcg gcggcgtggg agtgagtccc ggctactggc
     1021 aggacgaaga acggagtcgt gagcgattca tcgaacatcc ggaaagtgga gaacggctgt
     1081 accggactgg tgaccttggc agatatctga gcggtggcgc gatcgagttc atggggcgcg
     1141 cagatgatca agtgcaggtg ggcg
//
LOCUS       DASRPQ010002268         4858 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1197238, whole genome shotgun sequence.
ACCESSION   DASRPQ010002268 DASRPQ010000000
VERSION     DASRPQ010002268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4858
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1197238"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..649
                     /locus_tag="VFD73_25675"
     CDS             <1..649
                     /locus_tag="VFD73_25675"
                     /inference="COORDINATES: protein motif:HMM:NF039315.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF5996 family protein"
                     /protein_id="HZI77370.1"
                     /translation="ALVPRTVADFYREYTGMLDSLGFRIKLRPIPSEVEDTAPFDQDR
                     RHAAYDPDYMSRCWKILSRTTRVLEQFRGRFLGKCSPVHFFWGAFDLACTRFSGRSAP
                     PHPGGVPNLPDWAVREAYSHECMSAGWWPGGGPVPEPSFYAYSYPEPAGYAEAAVQPE
                     AAYYHPELREFILPYEAVRSAPNPERILLQFFQTTYEAGATLGNWDRKSLERPQE"
     gene            657..932
                     /locus_tag="VFD73_25680"
     CDS             657..932
                     /locus_tag="VFD73_25680"
                     /inference="COORDINATES: protein motif:HMM:NF014229.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UBP-type zinc finger domain-containing protein"
                     /protein_id="HZI77371.1"
                     /translation="MNCSHLDQVRSVEPNTPQGCEECLKTGGWWVHLRLCLTCGHVGC
                     CDSSPSKHATKHFRSSHHPLVKSFERGEDWAWCYVDEMMLEPAPEPR"
     gene            1267..4512
                     /locus_tag="VFD73_25685"
     CDS             1267..4512
                     /locus_tag="VFD73_25685"
                     /inference="COORDINATES: protein motif:HMM:NF040138.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HZI77372.1"
                     /translation="MGEPLNDSLVFLVTDSRARPVEGAQVVFLLADAGPGAAMVPDTA
                     TTDANGMATARFQLGTRIGPQAGQAMVVVPEGTQQPNTRFSAVALSETANGIAAVSGD
                     NQAGPAGSTLPEPLVVQVTDGFGNPIPGVTINWSADGGGSVSESTTITDAQGQASVTR
                     TLGPAAGPQSTSATSEGLAGSPVTFSHTATAGNASLLSIVSGNNQTAEAGTELPGDLV
                     VRLVDAQGNGVPGAAVTWVIGTGGGRLSPENTTTDEAGRTSSRWTLGPNPGGNRADAV
                     VSGVGVVHFDAVGTSAAPPRLVILTQPPSSARNAAVLDRQPVIQVRDAGGQDVLTPGI
                     QITAQLTGGSGELLGTRQLNTDANGRVAFSNLAIAQAQGRRSLVFTAVGYAGATSSAI
                     DVQAIPTTTTITNDSPDPSAAGALVTVSFQVSASGVTPLGTVTVNDGDQSCVGTLSGG
                     SGSCQLPLNTPGQRTLRATYGGSPGLLGSSGTAAHQVNTPPPGNSSPHAEFRWQCNQL
                     SCSFTDASTDSDGQVVSWSWDFGDGQSSTDRQPTHTFPAPGTYTVTLVIADDDGAGDQ
                     AQARVDVKPPPANKPPHAEFDVSCSDLSCTFTDRSTDDDGTIMSRLWDYGDGTTGGDP
                     SHTYASAGKYKVTLTVTDNAGATDSRTHDADAKAPQPGNQPPTAAFTSSCSDLTCSFN
                     SDGSSDPDGRISSRIWDFGDGHSSNEANPSHGYSAARTYTVTLTVTDDRGTSSSVSHQ
                     VGVTQPNQPPRADFDVSCPELTCSFSDRSSDPDGTIVSRQWDYGDGTSGTEPSHTYSS
                     PGKYKVTLTVTDNDGASTSNTKDADAKAPPPNKPPVAAFTPSCTDLTCSFDSGGSTDQ
                     DGTISSRVWDFGDGSSSSEANPSHTYASGGSYMVKLTVTDNDGATGSVTHQINVSAPN
                     QAPTAAFTSSCSDLSCSFDSSGSGDPDGTIQTRTWDFGDGASANQANPSHTYGSAGTY
                     TVKLTVTDNDGSSSSVIHQVTATAPNQPPTAAQSSSCSGLTCSFDSGGSQDPDGTITA
                     RSWDFGDGTSSTDANPSHTYSAPGTYTVILTVTDNDGASDQATDQVSVTAP"
     gene            4612..4685
                     /locus_tag="VFD73_25690"
     tRNA            4612..4685
                     /locus_tag="VFD73_25690"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4646..4648,aa:Val,seq:cac)
BASE COUNT          903 a         1616 c         1497 g          842 t
ORIGIN      
        1 cgccctggtg ccgagaaccg tcgccgattt ctaccgggaa tacaccggta tgctggattc
       61 actcggtttc cggatcaagc tgcggcccat tccttccgag gtggaggaca ccgccccttt
      121 cgatcaggac cgccggcacg ccgcctacga cccggactac atgagccggt gctggaagat
      181 tctgtctcgg accacccgcg tgctcgagca gttccgggga cggttcctcg ggaaatgcag
      241 cccggttcat ttcttctggg gtgcattcga cctggcctgt acccgattct ccggccgctc
      301 cgcgccaccc catcccggtg gtgttcccaa cctgcccgac tgggcggtgc gggaggccta
      361 ttcgcacgag tgcatgagcg cgggctggtg gcccggcggt ggtcctgttc cggagccgag
      421 tttctatgcg tacagctacc cggagccagc cgggtatgct gaagctgccg ttcagccgga
      481 agcggcatac taccaccctg agctccggga gttcattctg ccctacgagg cagtccgttc
      541 ggcccccaat cccgagcgga tcctgctgca gttcttccag acgacgtacg aagccggcgc
      601 gaccttgggg aattgggacc gcaagtcact cgaacggcct caggagtaag tgagttatga
      661 actgttccca tctcgaccag gtccggtcgg tagagccgaa cacacctcaa gggtgcgaag
      721 agtgcctaaa gaccgggggc tggtgggtcc acctgcgcct gtgtctcacc tgcggccacg
      781 tgggctgctg cgactcttct ccctccaagc acgcgaccaa gcacttccgg agctcccacc
      841 atcccctggt gaagagcttc gagcgaggag aagactgggc ctggtgctat gtcgatgaaa
      901 tgatgctgga gcccgcgcca gaaccgcggt agattggatc gcccccgtgt cagccatcac
      961 tacaggacga aatcgggcgc aataacttga aatcggccgg gtcctgaccg accccggggc
     1021 cgttcacata gcaaacgtct aacggacccg ccggctcagc cgggtccaga gttcccccac
     1081 gtgccgctcc ctctccgtga atcgattcgt ttcgtccggt caggcctctc ggcacggatg
     1141 ggatggtccc ccttggttct ggccctcaca gttgtgagct gcgggggcgg cacagatctg
     1201 ctcctccccg gtgatggcca gcccgccgcg atccaagtcc atgacggcga cggacaaagc
     1261 ggtcgcgtgg gagagccact caacgactcc ctcgtatttc tggtgaccga ttcgcgagcg
     1321 cgcccggtgg aaggggccca ggtcgtcttt ttgctcgccg atgcaggacc gggtgcggcc
     1381 atggttccgg acaccgccac gacggatgcg aacgggatgg ccacggctcg gtttcagctg
     1441 gggacgcgga tcggtccgca ggcaggccag gccatggtgg tggtacccga gggaacccag
     1501 cagcccaata ccagattctc cgcggtagcc ctctcggaaa ccgccaacgg gattgcggcc
     1561 gtctcgggcg acaatcaagc gggtccggca ggctcgactc tgccagagcc gctggttgtc
     1621 caggtgaccg acggtttcgg gaacccaatc cccggtgtga ccatcaactg gtcagcggat
     1681 ggtggaggga gcgtcagcga aagcacgacc ataaccgacg cccaggggca ggcatccgtc
     1741 acccgaaccc tgggtccggc ggcagggccg cagagcacgt cggcaacgtc ggaggggctg
     1801 gcaggctcgc cggtcacctt cagccatacg gccaccgccg gaaatgcctc gctcctttcg
     1861 attgtatcgg gcaacaacca gacggccgag gcgggtaccg agctgccggg cgacctggtg
     1921 gttcgcctgg tcgatgccca gggcaacggg gtaccgggcg cggccgtaac ctgggtcatc
     1981 ggcaccggcg gcgggagact ttccccggaa aacaccacca ccgatgaagc ggggcgcact
     2041 tcttctcgct ggacgctggg accgaatcct ggcgggaacc gggctgatgc ggtggtgtcc
     2101 ggtgtcggtg tggtccattt cgatgcggtg gggacttcgg cggcacctcc tcggctcgtg
     2161 attcttaccc agcccccatc ctccgccagg aacgccgcgg tcctcgaccg ccagcccgtg
     2221 atccaggttc gcgacgcagg cggacaggac gttctgactc ccggcataca gatcaccgcc
     2281 cagctgacgg gcgggagcgg agaactgctg gggacccggc aactgaacac cgatgcgaat
     2341 ggtcgggtgg cgttttccaa cctggcgata gcgcaggcgc agggccggcg cagtctggtc
     2401 tttaccgccg tcgggtacgc cggcgcgacg tccagcgcta ttgacgtcca ggcgatcccc
     2461 acaaccacta cgattaccaa cgactcgccc gacccttcgg ccgctggagc gttggtgacg
     2521 gtctccttcc aggtcagcgc gtcgggagtg accccgctag gcaccgtcac cgtgaatgac
     2581 ggtgatcaga gctgcgtcgg aacgttgtcc ggtggaagcg gaagctgcca gctcccgctc
     2641 aacaccccgg ggcaacggac gcttcgggca acctacggag gctcccccgg tctgctgggc
     2701 agctccggca ccgcagcgca tcaggtgaat accccgcctc ccggtaacag ctcgccccac
     2761 gctgagttcc gttggcagtg caaccagctg agctgctcgt tcaccgacgc gagcactgat
     2821 tccgacgggc aggtagtgag ctggtcgtgg gactttggag atggccagag ctccaccgat
     2881 cggcagccga ctcacacctt cccggcgccg gggacatata ccgtcacgct ggtgatcgct
     2941 gacgacgatg gagcagggga ccaggcccag gcgcgggtgg acgtgaagcc gccaccagcg
     3001 aacaagccgc cccatgcgga gttcgacgtc tcctgttccg atctcagctg cacctttacc
     3061 gaccggagca ccgacgatga cggcaccata atgagtcgcc tctgggatta cggcgacggt
     3121 actaccggcg gcgacccatc gcatacctat gccagcgccg gcaagtacaa ggtgacgctg
     3181 acggtgactg ataacgccgg tgctaccgat agcagaaccc acgacgccga cgccaaggca
     3241 ccgcaaccgg gaaatcaacc cccgacggcg gcgttcacct cgagctgctc ggatctgacc
     3301 tgctccttca actccgacgg gagcagcgat ccggatggcc ggatctccag ccggatctgg
     3361 gatttcggcg atggtcactc ctcgaacgag gcgaaccctt cacatgggta cagcgctgcc
     3421 aggacgtata ccgtgacgct gacagtgacg gatgatcggg gtacgagcag ctcagtgagt
     3481 catcaagtcg gcgtgaccca gcccaaccag ccaccccgcg cagacttcga tgtgtcgtgt
     3541 ccggagctga cctgcagttt cagtgaccgg agctccgatc ccgatgggac gatcgttagc
     3601 cggcagtggg actacggcga cgggacctcc gggactgagc cgtcgcatac ctactccagc
     3661 cccggcaagt acaaggtcac gctgacggtt accgataacg acggagcgag caccagtaat
     3721 accaaggatg cggacgccaa ggctccgccc cccaataagc cgccggtagc ggcgttcacc
     3781 ccgagttgta ccgatctgac ctgctcgttc gattccggcg gaagcaccga tcaggacggc
     3841 accatttcca gtcgggtttg ggatttcggt gatggctcct cttccagcga ggcaaacccg
     3901 tcgcacacgt acgcctctgg cgggagctac atggtgaagc tgaccgtgac ggacaacgat
     3961 ggcgcgaccg gttcggtcac ccaccagatc aacgtttcgg cgcccaatca ggcgccaacg
     4021 gcagcgttca cctcgagctg ctccgacctg agttgttcct tcgattccag cgggagcggc
     4081 gaccccgacg ggactatcca aactcggacc tgggactttg gggacggcgc ctccgccaac
     4141 caagcgaacc cgtctcacac atatggttcg gccggcacgt acaccgtcaa actcacggtg
     4201 accgacaatg acggctccag cagctccgtg attcaccagg tgaccgctac ggcgccgaat
     4261 caacccccga ccgcggcaca gtcctcgagt tgtagtgggc ttacctgttc attcgactcc
     4321 ggaggcagcc aggacccgga cgggacgatt accgcgcgat cctgggactt cggtgatggc
     4381 acctcgtcca ctgatgccaa cccctctcac acctacagtg ctccaggcac gtatacggtt
     4441 atcctgacgg taaccgacaa tgacggcgcc tcggaccagg ccaccgatca ggtatcggtg
     4501 accgccccgt agcacagact gcaacgttcg cgcaccctgg taaagcaact tcacggccca
     4561 ttttggcttg ccttgccatg tcgcctaggt ataaactccc cctcccgaac cgggcgatta
     4621 gctcagctgg ttagagcgcg cgcctcacat gcgcgaggtc gggggttcga gcccctcatc
     4681 gcccatttcc ggttaccgca gggaagcccc cgcagctacc ttcctgccgt acccttgccg
     4741 tccgggcaag ttcgggcaaa catttacgtc ggttgcctac agggacttac gttgacgcta
     4801 gagtcgtatc ggatttcagg cgctgtgctc acgctggaag acccaagctc ggtcgacc
//
LOCUS       DASRPQ010002269         2654 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4329646, whole genome shotgun sequence.
ACCESSION   DASRPQ010002269 DASRPQ010000000
VERSION     DASRPQ010002269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2654
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4329646"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..452
                     /locus_tag="VFD73_25695"
     CDS             <1..452
                     /locus_tag="VFD73_25695"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI77373.1"
                     /translation="RAMPAQLIMIGDGPERMDAENESRELGVDADVRFLGRIDSVASL
                     LQGSDLFVLPSQTESFGLAALEAMACGSPVVASRAGGLPEVIDDGVNGILEPVGSVEA
                     MGRRAVELLREPERHAAMRAAAVAKAQQFSADRIVPMYEAFYREVLE"
     gene            462..1256
                     /locus_tag="VFD73_25700"
     CDS             462..1256
                     /locus_tag="VFD73_25700"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: protein motif:HMM:NF001389.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HZI77374.1"
                     /translation="MAPDLLLKAALLGLVEGATEFIPVSSTGHLIVVSRWLDLVDERA
                     KTFDIFIQLGAILAVVWLYRARLLQMVRSLGSGGGRLALNLAIAFLPAALVGFLAHDW
                     IKEHLFTTTVVALAFVVGGVLILVIERWAPRSSVSDLQAIPAPTALGVGIAQVLSLVP
                     GTSRSAATILGGYGLGLSRVTATEFSFLLAIPVMLAATLYDLLKSWSILAPSDAPVFA
                     VGFVVSFLAALVVVRGFLVYVSRHSFAAFAWYRIGFGILLLLFMKG"
     gene            1257..1997
                     /locus_tag="VFD73_25705"
     CDS             1257..1997
                     /locus_tag="VFD73_25705"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HZI77375.1"
                     /translation="MTDSFTDASPHPVHSFKRVGSTMDVIHSLAAEGALAGTAVIAAE
                     QLEGRGSRGRPWHSPVGGLWLSVLLRPESVAGLEVVSLRVGLAVARAIEGFTGSAPEL
                     KWPNDLMLDHRKLGGILCEARWQGASLAWVTVGIGLNVQNRIPAELEQSAVALEQVCP
                     GITPRALSEPIIAAVRQLDLSPERLSPKELEEFDRRNWLRGKQLKEPVHGSVTGVQGD
                     GALLVHTNDGLVPLRSGSLELAPPSGAH"
     gene            2000..>2654
                     /locus_tag="VFD73_25710"
     CDS             2000..>2654
                     /locus_tag="VFD73_25710"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: protein motif:HMM:TIGR00671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HZI77376.1"
                     /translation="MLLALDIGNTEITAGLFQGEELEAHWRLTTNPDRTPDEWAGAIG
                     GFLIQGGHSPNEVRAVCLASVAPPVTQSIIAGVALSTGCTGVAVDARTPLPVTLDVDE
                     PLTVGADRIVNVLAGLDLFHSDGIVVDFGTATTFDCFTADARFIGGAIMPGLRTSADQ
                     LTRRAAKLPATELQAPERVIGRRTEECIQAGVLFGAADAVDGMVRRIREEWPGKKNPR
                     "
BASE COUNT          408 a          806 c          917 g          523 t
ORIGIN      
        1 gtcgcgccat gccggcgcag ctcatcatga tcggcgatgg accggagcgg atggatgcgg
       61 aaaacgaatc acgggagctc ggagtcgatg ccgacgtacg gttcctgggc cgaatcgatt
      121 cggtcgcctc gctcctgcag gggagcgatc tcttcgtttt gccatcccaa accgagtcat
      181 tcggacttgc ggctctggag gcgatggcct gtggctcgcc cgtggtcgcc agcagggcag
      241 gggggttgcc ggaagtcatc gatgacggcg tgaacggaat tctggagccg gtgggctcgg
      301 tggaagcgat ggggcgtcgg gcggtggagc tgctccgcga gcccgagcgc cacgccgcca
      361 tgcgcgcggc agcggttgcc aaggcgcagc agttctccgc cgaccggatc gtcccgatgt
      421 acgaggcgtt ctatcgtgag gtgctggaat gacggcgctg cgtggctcct gacctgctgc
      481 tgaaggcggc gctcctcgga ctggtggagg gagccacgga attcattccg gtgtcgtcca
      541 ccggccacct gatcgtagtc agccggtggc tggatctggt cgacgaacga gccaagacct
      601 tcgacatctt cattcagctc ggcgccatcc tcgctgtggt ttggctgtac cgcgcgcggc
      661 tcctccagat ggtccgttcg ctgggatcag gaggcgggcg gctggcgctc aatctcgcga
      721 tcgccttcct cccggctgcc ctggtcggct ttctggcgca cgactggatc aaggaacacc
      781 tcttcaccac taccgtcgtg gcactcgcgt tcgttgttgg cggcgtgctc atcctcgtga
      841 tcgaaagatg ggcgccgaga tcgtcggtca gtgacctcca ggcgattccg gcccccactg
      901 ccctgggggt tggaatcgcc caggtgctct ccctggtgcc gggcacttcg cgctcggcgg
      961 caacgattct cggcgggtac ggactcgggc tgtcgcgggt gactgcgacc gagttctctt
     1021 tcttgctggc cattccggtc atgctggcgg ccacgctgta tgatctgctg aagagctggt
     1081 cgatcctcgc gccgagcgat gcaccagtgt tcgctgtggg gttcgtggtc tcgttccttg
     1141 ccgcgctcgt ggtcgttcgc ggcttcctgg tgtacgtgtc gcgccacagc tttgctgcgt
     1201 tcgcctggta tcgcatcggc tttggcatac tgttgctgct gttcatgaaa ggctagatga
     1261 cggactcatt cacggacgcg tcgcctcacc cggtccactc cttcaagcgg gtgggctcga
     1321 ccatggacgt cattcatagt ctggccgctg agggagcgct ggcggggacg gcggtgatcg
     1381 ccgccgagca gctggaaggc aggggctccc gcgggcggcc ctggcattcc cctgtcgggg
     1441 gcctctggct cagcgtgctg ctccggccgg agagcgtggc tgggctcgag gtggtgagtc
     1501 ttcgggttgg tcttgctgtc gcgcgcgcca tcgaaggttt taccggaagt gctccagagc
     1561 tcaaatggcc caacgatctc atgctcgatc atcgaaaact cggagggatc ctgtgtgaag
     1621 cgcgctggca aggggcatcg ctggcgtggg tgacggtggg gatcgggctc aacgttcaga
     1681 accggattcc tgccgagctg gagcagagtg cggtcgcact ggagcaggta tgcccgggga
     1741 tcactccgcg ggctctctcc gagccgatca tcgctgccgt ccggcagctg gacctgagcc
     1801 cggaacgtct gagtccgaaa gagctggagg agttcgatcg ccggaactgg ctccgtggaa
     1861 agcagctcaa ggagccggtg catgggtcgg tcactggagt gcagggtgat ggcgcgctgt
     1921 tggtccatac gaacgacggt ttggttccgc tgcggagcgg ctcgctcgag ctggcgccgc
     1981 catccggagc gcattgacgg tgctgctcgc gctggatatc gggaacaccg agattaccgc
     2041 cggactcttt cagggagagg agctggaggc tcactggcgc ctcaccacca accctgaccg
     2101 cacccctgac gagtgggccg gcgccatcgg agggtttctc atccagggag gacattcccc
     2161 caacgaggtc cgcgctgtct gcctggcatc ggtggccccg ccggtgaccc agagcatcat
     2221 tgccggggtg gcgctctcca ccggctgcac cggggtcgcg gtggatgcca ggacaccgct
     2281 cccggtcacc ctggatgtgg acgagccgct caccgttgga gcggaccgga tcgtaaacgt
     2341 gctcgcgggt ctcgacctct ttcattccga cggaatcgtg gtggacttcg gcaccgccac
     2401 gaccttcgac tgcttcaccg cggatgctcg tttcatcggc ggagccatca tgcccgggct
     2461 tcgaacatcg gccgatcaac tcacccgccg agccgcaaag ttgccggcca cagagctgca
     2521 agcgccggag cgggtcatcg gccgccgcac ggaggagtgc attcaagcag gggtgctgtt
     2581 tggtgccgca gatgcagtag atgggatggt tcgtcggatc agagaggaat ggccagggaa
     2641 gaagaatcct cgaa
//
LOCUS       DASRPQ010002270         1114 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2450068, whole genome shotgun sequence.
ACCESSION   DASRPQ010002270 DASRPQ010000000
VERSION     DASRPQ010002270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2450068"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..241
                     /locus_tag="VFD73_25715"
     CDS             <1..241
                     /locus_tag="VFD73_25715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77377.1"
                     /translation="PTNGKSFRMFHHVLSPRRADLLSRWSARYCYQSVLESPRRKICD
                     LEDEPVSKLEHGLVHWEGKGHAAAAHGTAHYSIAT"
     gene            509..>1114
                     /locus_tag="VFD73_25720"
     CDS             509..>1114
                     /locus_tag="VFD73_25720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77378.1"
                     /translation="MLPMSLVLVLSLALALACSAIPWLAHPLPGWLLAIALVVGITAN
                     LLGVVLTLPLYPWLDLVVLVVAWSSGLLLGRSVAPSFRPFLLVFLCLSAADVLLTGGL
                     SLSSSHHAATAGSNSAGGSTPLRFGDLLLLLPWGRFETNVVDVLLLAALAEHWRRRDA
                     TYLIALLPGAGGYILAVGFILVTGLGIVPGIPFFTAGYIVTE"
BASE COUNT          159 a          369 c          342 g          244 t
ORIGIN      
        1 accaacgaac ggaaagtcct tccgcatgtt tcatcacgtc ttgtcgccgc gacgtgctga
       61 cttgctgagc cggtggtcgg ctcggtactg ctaccaaagt gtgctggagt cacctcggcg
      121 caagatatgt gacctggaag atgagcccgt ttcgaaactc gagcacggct tggttcattg
      181 ggaaggaaag gggcatgccg ccgctgcgca tggcacagcg cattactcca tcgcgacgtg
      241 acgttcgtca cggatgaacg tgactcgcca cacctgcagt gagcgtcagc agcacctaca
      301 cttgtcgcag cgggcactcg gttgcgtgtg cgtccttcat acgtggagag cggtctactc
      361 gatctggcgt tgctggcaat gatggcgatg cgctggcctg cagataggca ggcagatgcc
      421 cgtccaggta gagcccatcc tgtccggtct gcggctcgca tgaaggcatc caccagcgag
      481 ggcaccgacc atagaaggct ggtacatcat gctccctatg tcactggttc tcgtcctgtc
      541 cttggcactg gccctcgcct gctcggccat cccctggctc gcccacccac tgcctggctg
      601 gctcctcgcc atcgcactcg tcgtcgggat cacggcgaac ctgcttggcg tggtgctcac
      661 gcttccgctg tacccatggc ttgacctcgt ggtgctggtg gtggcctgga gcagtggcct
      721 gctgctgggc cggagtgtgg caccgagctt ccgtcccttc ctgctcgtgt tcctgtgcct
      781 cagtgccgcg gatgtgctcc tgaccggggg gctgtccctt tcatcatcgc atcacgccgc
      841 cacggccggt tccaactccg cgggcggttc caccccgctg cgctttggcg acttgctgct
      901 cctgctgccc tgggggcgct tcgagaccaa cgtcgtcgac gtgctgctgc tggccgccct
      961 cgccgaacac tggcgccggc gcgatgccac gtacttgatc gcgctcctgc cgggcgctgg
     1021 tggctacatc ctggccgttg ggttcatcct ggtgaccggg ctcgggatcg tgcccggcat
     1081 ccccttcttc accgctgggt acatcgtgac tgaa
//
LOCUS       DASRPQ010002271         1130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4657695, whole genome shotgun sequence.
ACCESSION   DASRPQ010002271 DASRPQ010000000
VERSION     DASRPQ010002271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4657695"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1130)
                     /locus_tag="VFD73_25725"
     CDS             complement(<1..>1130)
                     /locus_tag="VFD73_25725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77379.1"
                     /translation="SGADSSLSYLREGMVDLLAAKLSGTAGLRATDPRGVLAAWRRKA
                     RGPADLPEQDAVRVSQALGAGRLIEGDVVGTRQQITINAAILDTRDHRVTAQASVEGS
                     PDSLPRLVDRLAGQLLALEAGESEQRLANLTSTSLPALRAYLDGQALIRRGGYKQAAQ
                     KFSLALQQDSSFALAGLGLSRAGQWFGEGTDGPGSVLAWNYRDKLAPADRALLDVYLG
                     PRWPAPSRVLDFITASEQLVQLAPDNAEAWEVLGDNLYHNGGLVGLLDALPRAAQAFA
                     RAIALDSSFAPALEHGISLALALGDTAGARKALARMLQVDSSSGNVATARWVLASALG
                     DSASRRDALRSDSLVGGLMIGGAVTFGLPLQDADSVLRLNQS"
BASE COUNT          200 a          388 c          352 g          190 t
ORIGIN      
        1 actctggttg agccgaagta cgctgtcggc atcctggagc ggcaagccga aggtgaccgc
       61 gccaccgatc atgagcccgc ccaccaggct gtcactcctg agcgcatcgc ggcggcttgc
      121 gctgtcaccc agtgcggagg ccagcaccca tcgggccgtg gccacattgc ctgagctgga
      181 gtcgacctgg agcatccggg cgagcgcctt ccgggccccg gcagtgtcgc ccaatgcaag
      241 cgccagagag atcccatgct cgagcgcggg agcaaagctc gaatccaggg cgattgcccg
      301 ggcaaacgcc tgggctgccc ggggaagagc atccagcagt ccaaccagac caccattgtg
      361 gtagagattg tcgcccaaaa cctcccacgc ttcggcgttg tcgggagcca gctgaaccag
      421 ctgctcggac gctgttataa aatcgagtac tcgtgacgga gctggccatc ggggtcccag
      481 atacacatcc agtaaggcgc gatcggccgg cgctagcttg tcccgatagt tccaggcgag
      541 gacgctcccg ggcccgtcag tgccctcacc gaaccattgc cctgcgcggc tcagacccag
      601 tcccgcgagc gcaaagctgg agtcctgctg cagagccaga ctgaacttct gcgcggcctg
      661 tttgtacccg ccccgacgga tcaacgcttg tccatcgagg taggcccgaa gtgctggaag
      721 agacgtactg gtcaggttgg ccaggcgctg ctcgctctcc cccgcttcca gcgccagaag
      781 ctggccggcc aaccggtcga ccagtcgcgg cagactgtcg ggtgaccctt ccacgcttgc
      841 ctgcgccgtc actcgatggt cccgggtgtc gagaatggcg gcattgatgg tgatctgctg
      901 gcgagtgccg accacgtcgc cttcgatcaa tcgtccggca ccgagtgcct gactcacccg
      961 gaccgcgtcc tgctcgggga ggtctgccgg ccctcgagct tttcttcgcc aggccgcgag
     1021 cacaccgcgg ggatcggttg ccctcaggcc ggctgttcca ctcagcttgg ccgccaggag
     1081 gtccaccatg ccctcacgga gatagctcag cgaagaatcg gcaccgctca
//
LOCUS       DASRPQ010002272         1288 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_889721, whole genome shotgun sequence.
ACCESSION   DASRPQ010002272 DASRPQ010000000
VERSION     DASRPQ010002272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1288
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_889721"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..584
                     /locus_tag="VFD73_25730"
     CDS             <1..584
                     /locus_tag="VFD73_25730"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HZI77380.1"
                     /translation="LKQTQVRNLTVRAGIRGVLQEQPLKVGQWVTPGTTLAKVVQPDH
                     LKAELKIPETQAKDIQLNLPASVDTHNGVIAGHVMRIDPAVYNGTVTVDVMLDDPLPP
                     GARPDLSVDGTIDLERLSNVLYVGRPAFGQENSTVGMFVLQPDGKTALRDQVKLGRSS
                     VNTVEILGGLKDGDQVILSDMSRWDNFDRIRLE"
     gene            598..>1288
                     /locus_tag="VFD73_25735"
     CDS             598..>1288
                     /locus_tag="VFD73_25735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI77381.1"
                     /translation="MNATAPTPGQQLIRMDTINKVFYTDEVETHALSGIQLEVRKGEY
                     VAIAGPSGSGKSTLLSIIGLLDSPSEGEYWLNGSQVANLNINERSRIRNREIGFIFQN
                     FNLIGDLTVYENVELPLTYRGMSGAERKKRVLEALERVGMSHRLKHYPSQLSGGQQQR
                     VAVARALASQPELIFADEPTGNLDSRTGAELLAFLQHAVRDLGQTIVMVTHDATAASY
                     ADRVLFLSDGQV"
BASE COUNT          257 a          396 c          429 g          206 t
ORIGIN      
        1 agctgaagca aacccaggtg cggaacctga cggtgcgcgc cggcatccgg ggcgtgctgc
       61 aggagcagcc gctgaaagtg gggcagtggg tcacgccggg cacaacgctg gccaaggtag
      121 ttcagcccga ccatctgaag gccgaactga aaatccctga gacgcaggcg aaggacatcc
      181 agctcaacct gccggcttcg gttgatacgc acaacggggt gattgccggg cacgtgatgc
      241 gcattgatcc cgcggtctac aacgggacgg taaccgttga tgtgatgctg gacgatccgc
      301 tgccgccggg cgcccggccg gatttgagcg tagacggcac cattgatctg gagcgcctga
      361 gcaatgtttt gtatgtgggc cggcccgctt tcggccagga aaacagcacg gtaggaatgt
      421 tcgtgctgca gcccgacggg aagacggcgt tacgcgacca ggtgaaactg ggacgcagct
      481 cggtgaacac ggtggagatt ctgggcggcc tgaaagatgg cgaccaggtc attctctccg
      541 acatgtcacg ctgggacaat tttgatcgca tccgcttgga atagcgagga aacgcgcatg
      601 aatgcaaccg cacccacccc cggacagcaa ctgatccgca tggacacgat taacaaggtc
      661 ttctacaccg acgaggtgga gacgcacgcg ctctccggca tccagctgga ggtgcgcaag
      721 ggcgagtacg tggccatcgc cgggccctcg ggctcgggca agtccacgct gctgtccatc
      781 atcgggctgc tggattcgcc gtcggagggc gaatactggc tgaacggcag ccaggtggcc
      841 aatctcaaca ttaatgagcg gtcgcgcatc cgcaaccgcg agatcgggtt catattccag
      901 aacttcaacc tgatcggcga cctcacggtg tacgaaaacg tggagctgcc gcttacctac
      961 cgcggcatgt caggagcgga gcgcaagaag cgggtgctgg aggcgctgga gcgggtgggc
     1021 atgagccacc gcctgaagca ctatccctcg cagctctccg gtggccagca gcagcgcgtg
     1081 gcggtggcgc gcgcgctggc cagccagccc gagctcatct tcgccgacga gcccaccggc
     1141 aacctcgact cgcgcacggg cgccgagctg ctggccttcc tgcagcacgc cgtgcgcgac
     1201 ctcggccaga ccatcgtgat ggtgacccac gacgcgacgg cggcgagcta cgccgaccgg
     1261 gtgctgttcc tctcggacgg ccaggtgg
//
LOCUS       DASRPQ010002273         1343 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4657843, whole genome shotgun sequence.
ACCESSION   DASRPQ010002273 DASRPQ010000000
VERSION     DASRPQ010002273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1343
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4657843"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            108..605
                     /locus_tag="VFD73_25740"
     CDS             108..605
                     /locus_tag="VFD73_25740"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZI77382.1"
                     /translation="MNHRSNALADRLEFGAGALDALAAALTESEWNTRLPGDGRTVGV
                     VVHHVASMYPLEIQLAQTLAEGKPIAGVTWDMVHEINANHARDFEGVTKQEALDLLRK
                     NSAAAAAAVRALSDEELDRAAPVSLNSDAPLTCQFFLEDHPVRHSYHHLAAIRRALAV
                     VEQVA"
     gene            complement(678..1142)
                     /locus_tag="VFD73_25745"
     CDS             complement(678..1142)
                     /locus_tag="VFD73_25745"
                     /inference="COORDINATES: protein motif:HMM:NF024297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZI77383.1"
                     /translation="MKGILKVALLCALLWTEFTPAMQGQTAADSAAIRTTALDYIDGW
                     YTNNPTRMERALHPHLAKRLVWADSTGRSHLVDLTAMELVQGTKAHPPTPASERRKDI
                     SILSTFGNTAMVRIEASDWVDFLQEVKWNGDWKILNVVWENRPEKLAVSGKR"
BASE COUNT          254 a          397 c          439 g          253 t
ORIGIN      
        1 gagagcaaga agtcgggacg attggtcatt ggggaaggca cctgatgaga agaaaatgat
       61 gtcggccgtt cgggagccac gtccgtcacc atttgccgga ggtaccagtg aatcaccgtt
      121 ccaacgccct tgccgatcgt ctggaattcg gagccggagc gctcgatgcc ttggcggctg
      181 cgctcacgga atctgagtgg aacacccgcc tgcccggcga cgggcgcacc gtgggcgtcg
      241 tggtccacca cgttgcatcg atgtatcccc tggagattca gttggcgcag acgctggcag
      301 aagggaagcc cattgccggc gtgacctggg atatggtgca cgagatcaac gccaaccatg
      361 cacgggactt cgaaggggtc acgaagcagg aggccctcga cctgctccgg aagaacagcg
      421 ccgcggccgc cgcagcggtg cgggcgttga gcgacgaaga gttggatcgg gcggcgccgg
      481 tgtcactcaa ttccgatgcg ccgctgacct gccagttctt tctggaggat catccggtac
      541 gccacagtta ccatcatctt gcggcgatac ggcgggcgct tgcggtagta gagcaggttg
      601 cataaaggga gagcggaaac gtggaagggg cggaaagagc ggaagggccc aacccggtcc
      661 ttccgccact cccgcttcta ccgttttcca ctcactgcca acttctccgg ccggttctcc
      721 cagaccacgt tgagaatctt ccagtctcca ttccatttca cttcctgcag gaaatccacc
      781 cagtctgacg cctcgatccg caccatggcg gtgttgccga aggtgctcaa aatgctgatg
      841 tccttccgtc gctctgaggc gggagtgggt gggtgcgcct tggttccctg gaccagctcc
      901 atcgcggtca aatcgacgag gtgactccgt ccggtcgagt cggcccagac cagccgcttg
      961 gccaggtggg gatgcagggc gcgctccatg cgggtcggat tgttggtata ccatccatcg
     1021 atgtagtcga gcgccgtggt gcggatggcg gcggaatcgg ccgcggtctg tccctgcatg
     1081 gccggtgtga actcggtcca gaggagtgcg cagagtaggg cgaccttcag tatgcctttc
     1141 atgggagcct cgagtgtaga aggaatccaa gctgaggcaa accggagcga gggccaacac
     1201 tcccgggccg aagtggactc gacgcgtgac caacgaggac gctgctgtga cgaatgggag
     1261 cggctctctc gcgctgttgc acaccgctca ccggagcgcg aagatgttct catggacctg
     1321 ccgcgctctc ctcgcattcg gct
//
LOCUS       DASRPQ010002274         1063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3079980, whole genome shotgun sequence.
ACCESSION   DASRPQ010002274 DASRPQ010000000
VERSION     DASRPQ010002274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3079980"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..687
                     /locus_tag="VFD73_25750"
     CDS             133..687
                     /locus_tag="VFD73_25750"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: protein motif:HMM:NF013607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030612 - arsenate reductase (thioredoxin)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase ArsC"
                     /protein_id="HZI77384.1"
                     /translation="MTPLSNRPLRVLIVCTGNSARSQMAEAMLNRKGRGRLIAESAGS
                     QPAARVNPYAVEALREAGIDWRGRQPRGMDDLRDKAWDIVITVCDRAKEACPIFPGQP
                     VLGHWGMEDPAGVTGDEETKRHAFHEALQLISRRIDLMLALPMEKLERRALQEQLRAI
                     GREEGARVQLDEAVSVPEPRPLSK"
     gene            complement(831..>1063)
                     /locus_tag="VFD73_25755"
     CDS             complement(831..>1063)
                     /locus_tag="VFD73_25755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77385.1"
                     /translation="EAWTGDFITLTCDHELGLNQGVEDSMHQNYDGLPAAASVEQAIV
                     LAQLLILRDLERKAQRAAEQDQPAERELRPAA"
BASE COUNT          203 a          319 c          335 g          206 t
ORIGIN      
        1 tttcctaaca tgcggcgtcg tcccacgcca gaacagtgcg tgacacgatt ggtacatttg
       61 agaagtgcct ctgcaccatt ttggtgcgga ccgttgctgg cgcggattcc ccggctggca
      121 gatgcgagcc tcatgactcc cttatcgaac cgtcctttgc gcgtactgat cgtttgcacc
      181 gggaactcgg cacgcagcca gatggccgaa gcgatgctga accgcaaagg acgcgggcgt
      241 ttgatcgctg agagcgcagg ctcccaacct gctgcccgag tcaatcccta cgcagtggaa
      301 gcgctccgcg aggccggaat cgattggcgg ggccgtcagc cccgtggaat ggacgatctc
      361 agggataaag cctgggacat cgtgatcacg gtgtgcgacc gcgccaagga agcgtgtccc
      421 atcttcccag gtcagccggt tctcgggcat tgggggatgg aggacccggc cggcgtaacg
      481 ggggatgaag agaccaagcg ccatgctttc cacgaagcac tccagttgat ctcacggcgg
      541 atcgatctga tgctggcgtt accaatggag aaactggagc ggcgggcgct gcaagagcag
      601 ttgcgggcca tcggaagaga agagggggct cgagtgcagc tcgatgaggc ggtgagcgtg
      661 ccagagccgc gacctctatc gaagtagtgg tcggcataga gctgtggacg atacaggatt
      721 cttggcgctc gcgctcaacc accaacccac actgtactat cgacatcgtt cgttacccgt
      781 gatcgctcga gcaggtgccg gctgggagcc ccagctgtga tgctccatgt tcacgcagcc
      841 ggcctgagct cccgctcggc cggttgatcc tgctccgcag ctcgctgtgc cttccgttcc
      901 aggtcccgca ggatcagcag ttgagccagg acgatcgcct gctcgacgct ggccgcagcc
      961 ggtaagccgt cgtagttctg atgcatagaa tcctctacgc cctggttcaa ccccagttcg
     1021 tggtcgcaag tgagcgtgat aaagtctccg gtccaggctt ccc
//
LOCUS       DASRPQ010002275         2662 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2807794, whole genome shotgun sequence.
ACCESSION   DASRPQ010002275 DASRPQ010000000
VERSION     DASRPQ010002275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2662
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2807794"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1697
                     /locus_tag="VFD73_25760"
     CDS             <1..1697
                     /locus_tag="VFD73_25760"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI77386.1"
                     /translation="VTDFGIAKAVSAASAESLTQTGLAVGTPAYMSPEQASGEKEPDG
                     RSDVYSLGCVLYEMLTGSAPFTGSTAQALIMKRFTEPVPSVRATRPTVTDELEAVVSK
                     ALAKDPDDRFSSAAQLIKALGSPTVATPPSTPLASAGKSVAVLPFTDMSPERDQEYFT
                     DGIAEEIINALSKIQALRVASRLASFAFKGKNEDLGEIGKKLKVATVLGGSVRKSGNK
                     LRVSAQLVSVTDGYQLWSEKYDRQLEDVFEIQDEIADSIVKALRVMLSDEEKRAIEKV
                     PTENVQAYEYYLRGRQYFHQFRRKGIQFARRMFERAIEIDPGYALAYAGIADCCAFLY
                     MYWDGSKANLESADSASRKALELDPELAEAHASRGFAFSLSRQYDEARREFETAIRLN
                     PKLYEAHYLYARACVQEGKMVEAVEHYEDAARVRPEDYQALMLMQTPLDALGRTAEGK
                     SALRRGFHVVEKHLELNPDDTRALTLGAAALASLGQPERAIEWASRALAMDPTDSGVL
                     YNVACTFAISGLKDEALDRLELAIENGFGHREWLDHDETLNSVRDDARFQALRKRL"
     gene            1699..2448
                     /locus_tag="VFD73_25765"
     CDS             1699..2448
                     /locus_tag="VFD73_25765"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HZI77387.1"
                     /translation="MVVAFLAGVAGGAINALAGGGTNVTFPALVWLGLPPIQANATSA
                     VALWPGGLSAAWGFHHLIERAPRWWLWLLLPSASGGGFGAWLLIHTPPTFFRSLAPWL
                     VLASTLLVTVEPAMRRWLGGNGERRHSTIWRGIAIAVQAIVSVYGGYFGAGLGILMLT
                     ALAFLGVRDIRQANGLKNLFSAAVNGVAVLYFVIVGEVVWTPAVAVGAGSILGGYGAA
                     RLGQTLSDSRMRWIVAATGIAIAGAMFAKLA"
     gene            complement(2470..>2662)
                     /locus_tag="VFD73_25770"
     CDS             complement(2470..>2662)
                     /locus_tag="VFD73_25770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HZI77388.1"
                     /translation="VLVSWLLGTPMNLVFSNPLELIAVAGVAFAVNAIAQDGETNWFE
                     GVLLLSVYAVLGLAFFFVR"
BASE COUNT          495 a          829 c          861 g          477 t
ORIGIN      
        1 tcgtcaccga cttcgggatt gccaaggcgg tgagtgccgc cagcgccgag agcctgaccc
       61 agaccggtct ggcagtggga acgccggcct acatgagtcc ggagcaggca tcgggtgaga
      121 aagagccgga tgggcgcagc gacgtgtaca gccttggttg tgtgttgtac gagatgctca
      181 ccggctcagc cccgttcacc ggcagtacgg cgcaggccct gatcatgaag cgcttcaccg
      241 agccggtgcc atcggtgcgc gccacccggc cgactgtgac ggacgagctc gaggcggtcg
      301 tctccaaggc gcttgccaag gatccagacg atcgattcag cagcgcggct cagttgatca
      361 aggcactagg ctcgcctacc gtcgcgaccc cgccgtccac ccccctcgcc agcgctggga
      421 agtccgtggc cgtgctgccg ttcactgaca tgagtcccga gcgggatcag gagtatttca
      481 ccgatggcat cgcggaggag atcatcaacg ccctgagcaa gatccaggcg ctccgggtgg
      541 cctcgcggct ggcgtccttc gcgttcaagg gaaagaacga agatcttggc gaaatcggca
      601 aaaagctcaa ggtggccacc gtcctcggcg ggagcgtccg caagtccggc aacaaactcc
      661 gagtaagcgc ccagttggtg agcgtgacgg acggctatca gctctggtcg gagaagtacg
      721 accggcagct ggaggatgtc ttcgaaatcc aggacgagat cgccgacagc atcgtgaagg
      781 cgctacgcgt catgttgagt gacgaagaaa agcgcgccat cgaaaaggtg cctacggaga
      841 acgtccaggc ctacgagtac tacctccgtg ggaggcagta ctttcatcaa ttccggcgca
      901 aaggaattca gtttgctcgt cggatgttcg agcgggccat cgagatcgat ccgggctatg
      961 ccctggccta tgccgggatc gcggactgct gtgccttcct ttatatgtac tgggacggca
     1021 gcaaggccaa cctggagagc gccgattcgg ccagccggaa ggcgctcgag ctcgatcccg
     1081 aactggcgga ggcacacgcc tcgcgtgggt tcgccttctc tctgagccga cagtacgatg
     1141 aagcccgtcg ggagttcgag acggccatac ggctgaatcc gaagctttac gaagcgcact
     1201 atctctacgc gcgagcctgc gttcaggaag gcaaaatggt ggaggcggta gagcattatg
     1261 aagacgctgc ccgggtccgg ccggaggact accaggcact gatgctgatg cagaccccgt
     1321 tggacgcgtt aggccgaacc gcggagggga agtcggccct gcgccgtggc tttcacgtcg
     1381 tggaaaaaca cctcgagctc aatcccgacg acacccgagc tctcacgtta ggcgcggccg
     1441 cgctggcgag cttagggcag cccgaaagag ccattgaatg ggccagccgc gctctcgcca
     1501 tggatccgac ggattccggg gtgctgtaca atgtcgcgtg caccttcgcc atcagtgggc
     1561 taaaagacga ggcactcgac cggctggaac tcgccatcga gaatgggttc ggccaccgag
     1621 agtggctcga ccacgatgaa accctgaatt ccgtgcggga cgatgctcgt ttccaggccc
     1681 tccggaaacg cctatgagat ggtcgtcgcc ttcctcgccg gtgtggctgg tggcgccatc
     1741 aacgcgctgg ccggcggggg gaccaatgtc acctttccgg cgctggtctg gctcggcctg
     1801 ccaccgatcc aggccaatgc gaccagtgcc gtcgccctct ggcccggggg tctgagcgca
     1861 gcctggggct tccaccatct gatcgagcgg gctcctcgct ggtggctctg gttgctgctg
     1921 ccctcggcca gcggcggtgg cttcggtgcc tggctcctga ttcatacgcc accgacgttc
     1981 ttcagatctc tggcgccttg gctggtgctc gcctcgacgc tgctggtgac ggtcgagccc
     2041 gccatgagga ggtggttggg tggaaacggc gagcgacgcc actcgaccat ttggcgcggc
     2101 atcgcaatcg ctgtccaggc gatcgtgtcg gtctatggag gctacttcgg tgccggcctc
     2161 ggaattctca tgctcaccgc gctggcgttc ctcggtgtgc gcgacatccg gcaggccaat
     2221 ggcctcaaga atctgttcag tgcggcggtc aatggcgtcg cggtgctcta cttcgtcatc
     2281 gtcggggagg tggtctggac tccagcggtg gcggttggcg ccggctcgat cctcggcggc
     2341 tacggtgccg ctcgattagg gcaaaccctg agtgactcca ggatgcgctg gatcgtcgcg
     2401 gccaccggta tagccatcgc cggcgccatg ttcgcgaagc tggcgtagct ccagcccgat
     2461 cggtcgctcc taccgtacaa agaagaacgc caagcccagc acggcataca ccgaaagcag
     2521 cagcacccct tcgaaccagt tcgtctctcc atcctgggca atcgcattga ccgcgaaggc
     2581 cacgccggcc accgcgatca gctcgagagg attgctgaac accagattca tcggggtgcc
     2641 gagcagccat gacaccagca cc
//
LOCUS       DASRPQ010002276         1087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4025690, whole genome shotgun sequence.
ACCESSION   DASRPQ010002276 DASRPQ010000000
VERSION     DASRPQ010002276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4025690"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..307
                     /locus_tag="VFD73_25775"
     CDS             <1..307
                     /locus_tag="VFD73_25775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77389.1"
                     /translation="CHGPAAFRRAQAPDGSPIVKGKSVTGFSNTEEAAAGLTDVVPFL
                     VEDMLKQNGGDYSKAADWQPHAVTAGNLITGQNPASSESTAKALLTQLAEQRISAVR"
     gene            complement(291..569)
                     /locus_tag="VFD73_25780"
     CDS             complement(291..569)
                     /locus_tag="VFD73_25780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77390.1"
                     /translation="MTDFRRILHRDTNTRISMRRVLAAALGFGSLGALAGAFAVGAVG
                     IKRLGIARLALGSGRIGRLAVDELDVNRLRLRELSTDSPFDDTATALR"
     gene            complement(746..>1087)
                     /locus_tag="VFD73_25785"
     CDS             complement(746..>1087)
                     /locus_tag="VFD73_25785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77391.1"
                     /translation="LESRVREHPNEWLYHGFLSWAYAYERRKADAIREGQSAESITPL
                     SKDAVDGLGPIYFLARSYMLTGELDSAVARLDTMLSVPSNISTTTLRFDPVWDELRGN
                     PHFEEMVAEHR"
BASE COUNT          217 a          360 c          334 g          176 t
ORIGIN      
        1 ctgtcacgga ccggcggcgt tccgccgggc gcaggctccg gacggctcac ccatcgtcaa
       61 aggcaaatcc gtcaccggct tcagcaacac cgaagaggcg gcggccgggc tgaccgacgt
      121 ggtgccgttc ctggtcgaag acatgctgaa gcagaacggc ggggactact ccaaggcggc
      181 agactggcag ccgcacgcgg tgaccgcggg caacctgatc accgggcaga accccgcgtc
      241 ttcagagtcg acagcgaagg cattgttgac ccagctggcg gaacagagaa tcagcgcagt
      301 gcggtagcgg tatcgtcgaa ggggctatcg gtcgacagct cgcgtaaccg aagacggttc
      361 acgtccagct cgtcgaccgc gagccggccg atccgccccg atccgagcgc caggcgggca
      421 atgccgagcc gcttgatgcc caccgctccc acggcaaacg ctccggcgag cgcgcctaaa
      481 ctcccaaatc cgagcgcggc ggccagcacc cggcgcatcg agatccgtgt gtttgtgtca
      541 cgatgcagaa ttcgtcgaaa atccgtcaca cttcctcctc cgcagcttgg tggctaaggc
      601 cctgtcagag ctggagttcc tcgtgaattc caggcgagag ccttggtgtg atcccattcc
      661 cagcggtaaa ctctagcggc gagcagtcca gacacaaccg cgaaatttga ttttcggcgc
      721 cagcgggcca catctgaagc gtggctcacc gatgctcggc caccatttcc tcgaaatgcg
      781 ggttgccccg gagctcgtcc cacaccggat cgaaccggag cgtcgtggtc gagatgttgg
      841 agggcaccga gagcatcgtg tccagccggg caacggcaga gtccagctct cccgtcagca
      901 tgtagctccg agccagaaag taaatcggcc ccagaccatc cacggcatcc ttcgacagcg
      961 gggtaatgct ttcggccgac tgtccctccc ggatcgcgtc cgccttgcgc cgttcgtagg
     1021 catacgccca ggacagaaag ccgtggtaga gccactcgtt gggatgctct cgaacccggg
     1081 actccag
//
LOCUS       DASRPQ010002277         1997 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2171024, whole genome shotgun sequence.
ACCESSION   DASRPQ010002277 DASRPQ010000000
VERSION     DASRPQ010002277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2171024"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1082)
                     /gene="rho"
                     /locus_tag="VFD73_25790"
     CDS             complement(<1..1082)
                     /gene="rho"
                     /locus_tag="VFD73_25790"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF006886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HZI77392.1"
                     /translation="MLGVLELAQRGSGFLRRREASYLPADGDIHVGERLIRQFGLRVG
                     DEIAGRVRNGQGKGRGPSLENVSTIQGQSPDQIRSRPEFSRLAATHPNEQLRLESPSP
                     VPDDYTARVIDLLCPLGKGQRALVVAPAKAGKTMVLQAIARGLNRNNPSAELFILLID
                     ERPEEVFEMEAAGVGEVIASSFDNPAQQHVRIAELTLERARRKVELGGDVMLIVDSLT
                     RLARAYNTVEKGTGRTLSGGLDAQSLEKPKRFLGSARRIDPAQGGGSLTIVATALVDT
                     GSRMDQVIFEEFKGTGNSELVLSRELAERRIYPAIDLVASATRREELLLEPDALVASR
                     NLRQRIAGMTPINAMNDLLTDLRRTKT"
     gene            complement(1082..1495)
                     /locus_tag="VFD73_25795"
     CDS             complement(1082..1495)
                     /locus_tag="VFD73_25795"
                     /inference="COORDINATES: protein motif:HMM:NF014688.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HZI77393.1"
                     /translation="MATLDSLIPRFKAADRETRLETLLDYSKKLPPIPPRLEATKEEG
                     HKVEECQTTVYLWVEVEQGRVHIYADIPREAPTVRGFVSMLARALEGVTPEAVAQVPL
                     DLLDRLGLSETLGMTRTQGLTAILHRIKNSVAAAA"
     gene            complement(1622..>1997)
                     /locus_tag="VFD73_25800"
     CDS             complement(1622..>1997)
                     /locus_tag="VFD73_25800"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HZI77394.1"
                     /translation="EEYPAATLEAGDGMLKDYAAQVVSQIQGGEARPLPFDLKGTDFQ
                     RQVWEALRRIPRGETRSYQAIASEVGRPNAVRAVAQACARNPLALVIPCHRVIRQTGE
                     LGGYRWGLERKKRLLERERSAS"
BASE COUNT          357 a          629 c          616 g          395 t
ORIGIN      
        1 gtcttggtac ggcgcaaatc ggtgagcaga tcgttcatgg cattgattgg ggtcatgccg
       61 gcaatgcgct gacgcagatt gcgggacgca acaagggcgt caggctcgag cagcaattcc
      121 tctcgacggg tggcactggc aaccaggtct atggcaggat agatgcggcg ctcggcgagc
      181 tcgcggctca ggaccagttc gctgttcccg gttcccttga actcctcgaa gatcacctga
      241 tccatccggc ttcccgtatc caccaaggca gtcgcgacga tggtgagtga cccgccgccc
      301 tgggccgggt cgatccggcg ggcgcttccc agaaaacgct tgggtttctc cagcgattgc
      361 gcgtccagcc cacccgacag ggtacgaccg gtgcctttct cgacggtgtt gtaggcccgg
      421 gcgagtcggg tgagtgaatc gacaatcagc atgacgtcgc ctcccagctc cacctttcgg
      481 cgggctcgct cgagcgtcag ctcggcgatg cgtacgtgct gctgggccgg gttgtcgaag
      541 ctggaggcga tcacttcccc cactccagcg gcttccattt cgaagacctc ctcgggccgc
      601 tcgtcaatca acaaaatgaa cagctcggcg ctcggattat tgcggttcaa cccacgagca
      661 attgcttgaa ggaccatggt cttgcctgcc ttggccgggg ccaccacgag agcccgctgc
      721 cccttgccca acggacataa gaggtcgatg acccgggcgg tgtagtcatc cggcaccggc
      781 gatgggctct ccaaccgcag ctgctcgtta gggtgggttg ccgccagccg ggagaactct
      841 ggacggcttc gaatctgatc aggtgattgg ccctggatgg tggagacgtt ctccaggctg
      901 ggaccacgac ccttcccttg tccattgcgt acccggccgg caatctcgtc gccgacccgg
      961 aggccgaact ggcggatgag ccgttcgccg acatggatat ccccatcggc tggcaggtag
     1021 ctcgcttcgc ggcgtcgtag gaatccgctg cctcgctggg ccagctcgag aacacccagc
     1081 atcaagctgc tgcagccacg gagttcttga ttcgatgaag tatggcagtc agcccctgag
     1141 tgcgggtcat gccgagcgtt tcgctcaatc ccagccgatc cagcaggtcg agaggaacct
     1201 gggcgaccgc ctcgggagtt accccctcca acgcccgtgc gagcatggag acaaacccgc
     1261 ggacggtggg agcttcacgg gggatatcgg catagatatg cactcgcccc tgttccacct
     1321 caacccagag atagacggtc gtctggcatt cctcgacctt atgtccctct tccttggtcg
     1381 cttccaggcg cggtgggatt ggcggcagct tcttggagta gtccagcagc gtctccagcc
     1441 gggtctctcg gtcagcggcc ttgaagcggg gaatgaggct gtcgagtgtt gccatacgtg
     1501 gttcctggct gcagaatcgg aaaactcttc acaatagata gcataccaag gcgaaaaaac
     1561 agaagcccgg tggaggtcaa ctccgccggg gctctggcgt atgatgtcgg ccggttggca
     1621 actagctggc gctgcgctcc cgctccagaa ggcgcttctt tcgttccaat ccccaccgat
     1681 agccacccag ctcgccagtt tggcggatca cgcggtggca cggaatgacg agcgccagcg
     1741 ggttccgagc gcacgcctgt gcaacggcgc ggacggcgtt agggcggccc acttcgctgg
     1801 cgatggcctg gtacgatcgc gtctcgcccc gaggaatccg tctgagagcc tcccagacct
     1861 gacgctggaa gtctgtcccc ttcaaatcaa acggcagtgg tcgcgcctct ccgccctgaa
     1921 tctgactgac aacttgagcg gcatagtctt ttagcatgcc gtcgcctgct tccagggtcg
     1981 cggcagggta ttcctct
//
LOCUS       DASRPQ010002278         1085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_573990, whole genome shotgun sequence.
ACCESSION   DASRPQ010002278 DASRPQ010000000
VERSION     DASRPQ010002278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_573990"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..504
                     /locus_tag="VFD73_25805"
     CDS             <1..504
                     /locus_tag="VFD73_25805"
                     /inference="COORDINATES: protein motif:HMM:NF024743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HZI77395.1"
                     /translation="SSDGTIRAQGLRGDVILEAAAGSVEVSDIRDAHLHVRTLTGPIS
                     LTDIRGSNLDIHSVSGNVSLRNVTGPSVEVNSGSGLISYEGDPGPVGDYLLTSHSGDL
                     DVSIPASALVDIKARSIKGEADPDFPIVNGFSAARTGNLLLKPGTITGSRFELRSFRG
                     KIHLKRP"
     gene            691..>1085
                     /locus_tag="VFD73_25810"
     CDS             691..>1085
                     /locus_tag="VFD73_25810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77396.1"
                     /translation="MKRVRLGVLIGLVLIVALYIFRGAGRWLDREDPLSRADIIFVLG
                     GGMPQRAVEAGKIFAQGYAPEVWCSRPDSPVNDLARLGIHYVGEEDYNRQILMRGGVP
                     ESAIHILPGPVVNTEEELQELGREMLRNG"
BASE COUNT          214 a          331 c          331 g          209 t
ORIGIN      
        1 tcctccgacg gcaccatccg ggcgcaggga ttgcgcggcg atgtcattct ggaagccgcc
       61 gccggctcgg tggaggtcag cgatatccgc gacgcacacc tgcatgtgag gactcttact
      121 ggacccatca gcctgactga cattcgtggc agcaacctgg acatccattc ggtgagcggc
      181 aacgtcagcc tgcgcaatgt aaccggaccg tcggtcgagg tgaactcagg aagcggactc
      241 atctcctatg aaggcgaccc cggcccggtg ggagattatt tactgaccag tcattcggga
      301 gacctggatg tctcgatacc cgccagcgct ttggtggata tcaaggcgcg ctccatcaaa
      361 ggcgaggccg atccggactt tcccattgtc aacggttttt ccgcagcccg caccggaaat
      421 ctcttgctga aaccaggcac gatcaccggt tcgcggtttg aactgcgctc cttccgaggc
      481 aaaatccacc tcaagcgacc ctaaatgcaa gtcgggccct ggcggggccg gcaccgaatg
      541 tcccacccga ctcacttggg gacagccgcc ctcggctgtc cggtcgagcg cagctcgacg
      601 gttttcttga aggaggcaaa atagcgtagc ttcgctccgc cggacagccg ggcgcggctg
      661 tccccacgtg ttcggcgtta acatgtcagc atgaagcgag tccggctcgg cgtgctgatc
      721 ggcttagtcc tgattgtggc gctgtacata tttcgcggag ccggccgctg gctcgaccgt
      781 gaagaccctc tttcccgcgc agatataatt ttcgtgctgg gcggaggcat gccgcaacgc
      841 gccgtcgaag ccggcaaaat cttcgcccag ggctacgccc ctgaagtctg gtgcagccgt
      901 cccgacagcc cggtgaacga cctggccagg ctgggcattc attacgtggg tgaggaagat
      961 tacaatcgcc agatcctgat gcgcggaggc gttccggaaa gcgcgatcca tattcttccc
     1021 gggccggtag tcaataccga ggaggagctg caggaattgg gacgcgagat gctgcgaaat
     1081 ggcaa
//
LOCUS       DASRPQ010002279         1075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2451110, whole genome shotgun sequence.
ACCESSION   DASRPQ010002279 DASRPQ010000000
VERSION     DASRPQ010002279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2451110"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1057)
                     /locus_tag="VFD73_25815"
     CDS             complement(<1..1057)
                     /locus_tag="VFD73_25815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77397.1"
                     /translation="MAQLTPVPTELSQALHDVIGFAHHPLAGITPAGAIEEFIHYVEH
                     SIVPSAATLLAAGDDVPLDIAYVAKFLAKGVGSSYLHQAAKTPLLQDSQHQLELAAHH
                     MTHAAGLAVPDLVHGVVGHIPFVTLALSTTREIRLYRRDKTTLDQSIVNITVDTGGVF
                     AGVTGAELAVHLIAGAHPAGIITIPAGIAGSIIARTLTRKYRQRPYKEALENYSALTT
                     AYSGKALELATELSDTARSTVGRERTLYLTRVSSPTLAQQAAATELQTLTTRLRAATV
                     TYSKTVLDLLEAGTKTMAGTAPNDHPASGSVPAVKAVAEITGAAKRCDTQVRQAQYAP
                     ALLTLTKPALPAPDSWRP"
BASE COUNT          161 a          325 c          373 g          216 t
ORIGIN      
        1 caggccgcca cgagtcaggt gctggcagtg caggcttcgt caaagtgagc agcgccggcg
       61 cgtattgcgc ctggcggacc tgggtgtcgc atcgcttggc ggcacctgtt atctcggcta
      121 cggccttgac ggcaggcaca gacccggacg ccgggtgatc gttcggggca gttccagcca
      181 tggtcttcgt ccccgcttcg agcaggtcaa gcactgtctt ggagtaggtc acggtcgctg
      241 cgcgcaggcg ggtggtgagc gtctggagct cggtagcggc cgcctgttgg gcaagggtcg
      301 gtgagcttac gcgggtgagg tatagcgtac gttcccgccc gaccgtactg cgcgccgtgt
      361 ccgacagttc ggtggccagc tccagtgctt tccctgaata cgctgtcgtt agcgcgctgt
      421 agttttccag cgcctccttg tatggacgct gccggtactt cctggtgagg gtacgcgcga
      481 taattgatcc ggcgataccg gcaggaatgg tgatgattcc ggccgggtgc gccccggcga
      541 tgaggtgcac ggccagctcc gcgcccgtga cgcctgcaaa taccccgccc gtatcgacgg
      601 tgatgttcac gatcgactgg tcgagggtcg tcttgtcgcg gcggtacagg cggatttccc
      661 gcgttgtcga caacgccagc gtgacgaatg ggatgtgccc gactacgccg tggacgaggt
      721 ccggcacggc gagcccggca gcgtgcgtca tgtgatgcgc agccaattcc agctggtgct
      781 ggctgtcttg tagcagcggg gtcttggctg cctggtgcag ataactggac ccgaccccct
      841 ttgcgaggaa tttggctacg taggcgatgt ctagcggcac gtcatccccg gcagccaaca
      901 gggtcgcggc actggggacg atgctgtgct ccacatagtg gatgaactcc tcgatcgctc
      961 ccgcgggcgt gatgccggca agggggtggt gcgcgaatcc aatgacgtcg tgcagcgcct
     1021 ggctcagctc tgtcggcacc ggcgtcagct gggccatccc tttcgccaga cccgc
//
LOCUS       DASRPQ010002280         1079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4026136, whole genome shotgun sequence.
ACCESSION   DASRPQ010002280 DASRPQ010000000
VERSION     DASRPQ010002280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4026136"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VFD73_25820"
     CDS             <1..190
                     /locus_tag="VFD73_25820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77398.1"
                     /translation="PSATASSPWQKATAALNAEGLGHGCSHMFVLAATRGFGARQHVS
                     PVAVTAASLASQRRVAAN"
     gene            256..>1079
                     /locus_tag="VFD73_25825"
     CDS             256..>1079
                     /locus_tag="VFD73_25825"
                     /inference="COORDINATES: protein motif:HMM:NF020037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HZI77399.1"
                     /translation="MGAGVKGGTGSRATGQQSVQDVVGVAMPPQRFSRGPQKPAQVLV
                     PNGKTGSWDGYRATGVGAWEWYMASGLLCLDPASMTLLGVDPDTYDGRIETWISHVHP
                     DDIAWVTAEVDKAVSTCGPYQAEYRVCWPDGSTRWVQVRGQVEADTDGNSFRMLGTAW
                     DTTRARTTSDGLRSALRYMSDGFLSVGRDWRVIFANVEAERLLNSQHDLTGRLLWDLL
                     VIRRVPGLEARCREAAAGTTPTSFEIQWPDTKRWYRFRLVPVSEGLAWYITDITESR"
BASE COUNT          199 a          326 c          376 g          178 t
ORIGIN      
        1 gccgtcggcc acggcatcct cgccctggca gaaggccact gctgcattga atgcagaagg
       61 cctagggcac ggatgctcgc acatgttcgt actggcagcc acccggggct tcggcgcgcg
      121 gcagcacgtg tcgccggtag ctgtgaccgc cgccagcctg gcgagccagc gtcgggtggc
      181 agcgaattga gtcgccgact cgtgacaagg ggttatgctg ctagctctgc gtacaaaagt
      241 gatgacatgt acttcatggg ggcaggcgtg aagggtggga caggcagtag ggcgaccggg
      301 cagcagagcg tccaggacgt cgtgggagtg gccatgccgc cgcagcggtt cagccgaggg
      361 ccgcaaaagc cagcccaggt gctagtaccc aacggaaaga ccggctcgtg ggatggctac
      421 agggcaacag gggtcggtgc ctgggagtgg tacatggcct cggggctgct gtgcctcgac
      481 ccggcttcga tgacattgct gggcgtcgac ccggacacct acgacggacg tatcgaaacc
      541 tggatcagtc acgttcatcc cgacgacatc gcctgggtca ctgccgaggt ggacaaggca
      601 gtcagcacgt gcgggccgta ccaggcagag tacagagtct gctggccgga cggcagcact
      661 cgctgggtgc aggtccgcgg ccaggttgag gcagacacgg acgggaactc gttccggatg
      721 ctgggcaccg catgggacac cacgcgggcg cgcacgacca gtgacggcct acgcagcgcc
      781 ttgcggtata tgagcgacgg tttcctttct gtcggcaggg actggcgggt tatcttcgcc
      841 aacgttgagg ctgagcgtct gctgaactca cagcatgacc tgactgggcg gctcctgtgg
      901 gacctgctcg tgatccgccg ggtaccgggt ctggaagccc gctgccgcga agcagctgcc
      961 gggacgacgc cgacgagctt cgaaatccag tggccggaca ccaaacgctg gtaccgcttc
     1021 cgactcgtcc ctgtatccga aggcttggcc tggtacatca ccgacatcac cgagtcgcg
//
LOCUS       DASRPQ010002281         1089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1199388, whole genome shotgun sequence.
ACCESSION   DASRPQ010002281 DASRPQ010000000
VERSION     DASRPQ010002281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1199388"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(162..467)
                     /gene="rsrA"
                     /locus_tag="VFD73_25830"
     CDS             complement(162..467)
                     /gene="rsrA"
                     /locus_tag="VFD73_25830"
                     /inference="COORDINATES: protein motif:HMM:TIGR03988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016989 - sigma factor antagonist activity
                     [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mycothiol system anti-sigma-R factor"
                     /protein_id="HZI77400.1"
                     /translation="MSCGKPHETPCTEVLDRVYSYLDGELDAPDITKIRQHLDECGPC
                     LAEYGLDELVKQLVHKHCGHDLVPHALREKVLIRIQQVKAELIVSQGEGRPWNPPLA"
     gene            complement(464..>1089)
                     /locus_tag="VFD73_25835"
     CDS             complement(464..>1089)
                     /locus_tag="VFD73_25835"
                     /inference="COORDINATES: protein motif:HMM:TIGR02947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZI77401.1"
                     /translation="PETLEQRSERFEREVLPYLDQLYSAGMRMTRNAADAEDLVQETF
                     AKAYASFHQFEPGTNLKAWLFRILTNTFINSYRKRQREPQRAGAEEVEDWQLARAASH
                     TSSGLKSAEAEALERLPDSDIKTALQALPEEFRIAVYLADVEGFAYKEIADIMGTPIG
                     TVMSRLHRGRRQLREMLQDYAADRGMVRAASAAGAQGEDSSPGEDEQ"
BASE COUNT          159 a          376 c          344 g          210 t
ORIGIN      
        1 ccacccgggt gccgcatcgg tcacctccgc tgccggtggc gcggctagtc cgagggcgtg
       61 ccacggcagg gcctcggccc agccatgcag gcccgttcat cgccgccagc caaagggtaa
      121 cgtgatcgcc agatttgcgc aggcccccgt aacgatgggc ttcaggccag cggggggttc
      181 caggggcgcc cttccccctg gctaacgatg agctcggctt tgacctgctg gatccggata
      241 agcaccttct cgcgcagcgc gtgcggcacg aggtcatggc cgcagtgctt atggaccagc
      301 tgtttgacca gttcgtcgag gccgtactcg gccaggcacg gcccgcattc gtcgaggtgc
      361 tggcggatct tcgtgatgtc cggtgcgtcg agttcaccgt ccaggtagga gtagacccgg
      421 tccagtacct cggtacacgg cgtctcgtgc ggcttgccgc agctcattgc tcatcctccc
      481 cgggactgct gtcctccccc tgcgcccctg ctgccgacgc cgcccggacc atgccccgat
      541 cggccgcgta gtcctgcagc atctcccgca attgcctgcg cccccggtgc aggcgggaca
      601 tcaccgtccc gatcggcgtg cccatgatgt cggcgatttc cttgtaggcg aaaccttcca
      661 cgtccgccag gtacaccgcg atgcggaact cttcgggcaa tgcctgcaag gcggtcttga
      721 tgtcggagtc cggcagccgc tccagcgcct ctgcctccgc cgacttcagt ccggacgaag
      781 tgtgcgaagc cgccctggcg agctgccagt cctccacttc ctcagccccg gcccgctgcg
      841 gttcgcgctg cctcttgcgg taggagttga tgaaggtgtt ggtgaggatc cggaacagcc
      901 atgccttcaa gttggtgccg ggctcgaact ggtggaacga ggcgtaagcc ttggcgaaag
      961 tctcctggac caagtcttcg gcgtccgccg cgttgcgggt catccgcatg ccggccgagt
     1021 agagctgatc caggtacggc aacacctcgc gctcgaatcg ctcgctccgt tgctcgagtg
     1081 tctcaggta
//
LOCUS       DASRPQ010002282         1283 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1540627, whole genome shotgun sequence.
ACCESSION   DASRPQ010002282 DASRPQ010000000
VERSION     DASRPQ010002282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1283
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1540627"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..521)
                     /locus_tag="VFD73_25840"
     CDS             complement(<1..521)
                     /locus_tag="VFD73_25840"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZI77402.1"
                     /translation="MALYSLHHVIDMDWMREAYRLTRKDGAAGIDGVTAAAYEVQLEA
                     NLRDLLDRIKSGCYQAPPVRRAYIPKADGSRRPLGIPTFEDKVAQRAIAMVLEAIYEQ
                     DFLPCSYGFRPGRSAHQALHALRSAIWSQRLYWVLDVDIQKYFDTMAHYHLRAFLDQR
                     VTDGVIRRMIDKWL"
BASE COUNT          200 a          439 c          382 g          262 t
ORIGIN      
        1 agccacttgt cgatcatccg ccggatcaca ccatccgtga ctcgttggtc gaggaaggcg
       61 cgcaggtggt agtgagccat ggtgtcgaag tatttttgta tgtcgacgtc caagacccag
      121 tacagtcgct ggctccagat ggcactgcgc agggcgtgca gcgcctgatg ggccgagcga
      181 cccggccgaa agccatagga gcagggcagg aaatcctgct cgtagattgc ttccagcacc
      241 attgctatag cacgctgcgc aaccttgtct tcgaaggtcg ggatgccgag cggccgccgc
      301 gatccgtctg ccttggggat gtatgcccga cgaaccggcg gtgcctggta gcagcccgac
      361 ttgatgcgat cgaggaggtc ccgaaggttg gcctccagtt gcacctcgta ggctgccgcc
      421 gtgacgccat cgatgcccgc ggcaccatcc ttgcgggtca gtcggtaggc ctctctcatc
      481 cagtccatgt caatgacatg gtgcagcgag tacagcgcca tcccgcgttg tctcctcgcc
      541 agttcggcta tccgttgtcg ttccgtggac aggtttgcag ggttcagtgc cccctcccgt
      601 gtttcccttc aacggttctc tccacgtggc gcctcccttc cctccgtcgg gtcccagcga
      661 gcccggttcc ccgacttcgc aggtactatg aaggcgctac gacctccccc gcaggtatgt
      721 cccggtccct tatgggttcg gttccaggct ccccaggctc ccctgtattc gtgctcgccg
      781 aagcgctccc ggcgcggcag ggtccgcgtc cgggcctggg ccttgatcag ccgggctgcc
      841 ctgtccggca ctctgcttga ggacctacaa gggatctcac aggtttcctg gcgttccatc
      901 ccagaccttt gcccggctct cagaccccgg ccggaccagc aggacctcgc catggcggtc
      961 ctgccggtgc tgcccccggg tccaacacac cgaaggctcc agcgtggaca tgatatcggg
     1021 gctcaacccc gcgcttcggt ctccgctgcc tacgcttcac gagcgtcgtt gccgccgccc
     1081 atgcaaggct cgcttccggc tggcgggctg cgcctttgcc gggagggtgt cgaaccctca
     1141 ggaacgcgat ggaaggtttc agattacatc atcctccttc ccaggacttc tcctgtcgca
     1201 agttggatcc acgccgagcg tctcgtccat aagctggtac cggcgaacga ccagcagcgc
     1261 cgagcgatcg agctcacgcg cga
//
LOCUS       DASRPQ010002283         1010 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_272693, whole genome shotgun sequence.
ACCESSION   DASRPQ010002283 DASRPQ010000000
VERSION     DASRPQ010002283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272693"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..473)
                     /gene="hslV"
                     /locus_tag="VFD73_25845"
     CDS             complement(<1..473)
                     /gene="hslV"
                     /locus_tag="VFD73_25845"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013939585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HZI77403.1"
                     /translation="MPFHGTTILGVRKNGRVALGGDGQVSIGETVVKSQSNKVRTLKG
                     GKVLAGFAGSVADALTLYEKFEEKLDRYPGNLPRAAVELAKDWRSDRVLRRLEALLVV
                     ADLEHSFLVSGAGELIEPDDGIVAIGSGGNFALAAARALLPEPNHSARDIVQRSL"
     gene            complement(482..>1010)
                     /locus_tag="VFD73_25850"
     CDS             complement(482..>1010)
                     /locus_tag="VFD73_25850"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZI77404.1"
                     /translation="SRAQGDELIPTRDLAMLELFYSAGLRLSELGGMNLEDLDLLSDQ
                     LKVRGKGRKERIVPVGSRAVLALRRYLRLREAVVGRSGADRRAVFVSRRGKRLTGRAI
                     QRIVHQMLDGIGGDGLRVHSLRHTFATHMLDAGADLRAVQELLGHASLSTTQIYTHTS
                     VERLKKVYNQAHPRA"
BASE COUNT          169 a          369 c          293 g          179 t
ORIGIN      
        1 tcgagtgacc gctggacgat atcccgtgcc gaatggttcg gctccggcag cagagctcga
       61 gccgccgcca gcgcgaagtt tcctcccgac ccgatcgcca cgatgccgtc atccggctcg
      121 atcagctcac ccgctccgct cacaaggaag ctgtgctcca gatcggctac gacgagcaga
      181 gcctcgagcc tccgaagcac ccggtcgctc cgccagtctt tggccagctc gacggcagcc
      241 cggggcaggt ttcccggata ccggtcgagc ttttcctcga acttctcgta cagggtgagc
      301 gcgtcggcca ccgatccggc aaagccggcc aggaccttgc cgcccttaag cgtgcggacc
      361 ttgttcgact gggacttgac caccgtctcg ccgatgctca cctggccgtc gccgcccaga
      421 gcgactcggc cgtttttccg tacgcccaga atcgtcgtgc cgtgaaaagg catcttcgtg
      481 ctcacgctct cgggtgcgcc tgattataca ccttcttcag ccgctccacg ctggtgtggg
      541 tatagatctg cgtcgtactg agcgaggcat ggcccagcag ctcctgcacc gcccggagat
      601 ccgctccggc atcgagcatg tgggtagcaa aggtgtgccg caacgagtgc accctcagcc
      661 cgtcgccccc gatgccatcg agcatctggt gaacgatgcg ctgaatggct cgtcccgtca
      721 gccgctttcc tcgccggctc acaaagacgg cgcgccggtc ggcgccggaa cggcccacca
      781 ccgcttcacg cagccggaga taccgccgca gcgccagcac ggctcgcgag ccgaccggca
      841 cgatccgctc cttgcgtccc tttcccctca ccttgagctg gtccgataaa aggtcgaggt
      901 cctccaggtt catcccgccc agctcggaaa gccggagccc cgcggagtag aacagctcca
      961 gcatcgccag gtccctggta ggaatcagct cgtcgccttg ggcgcgactc
//
LOCUS       DASRPQ010002284         1070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1199922, whole genome shotgun sequence.
ACCESSION   DASRPQ010002284 DASRPQ010000000
VERSION     DASRPQ010002284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1199922"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..792
                     /locus_tag="VFD73_25855"
     CDS             <1..792
                     /locus_tag="VFD73_25855"
                     /inference="COORDINATES: protein motif:HMM:NF025080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI77405.1"
                     /translation="VISEAERRGQAYLFKLRLTRRVKQVLERAMRDEDWRDAGAGWQG
                     KHGEIRLMGWSRQRRVVLLRRRLAGVMITQREADGQLALGFVEIDEERQEAWEYAVLV
                     TSLEAEVLTIGQLYRDRGDCENSFDELKNHWGWGGFTTHDLTRCRIMARIVALIFNWW
                     NLFVRLADPDHHREAITSRPLLLQAIGRQTNHAGRATVTITSSHGERDRARRALTRIA
                     AFFATLRETAEQLTELDRWYRILSHALVKYLKGRQLDPPRRLQAA"
     gene            939..>1070
                     /locus_tag="VFD73_25860"
     CDS             939..>1070
                     /locus_tag="VFD73_25860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HZI77406.1"
                     /translation="MRTPRDPIYAGHRYPAEIISYAVWLYFRFPLSLRMVEEMLAARG
                     "
BASE COUNT          198 a          330 c          351 g          191 t
ORIGIN      
        1 gtgatcagcg aggccgagcg ccgcggccag gcctatctgt tcaagctgcg cctgaccagg
       61 cgggtgaaac aggtgctcga gcgggcaatg cgggatgagg attggcgtga tgccggggcc
      121 ggctggcaag gcaagcacgg cgagatccgc ctgatgggct ggagccggca acggcgcgtg
      181 gtcctgctcc gccgccgtct ggccggggtg atgatcaccc agcgggaggc ggatgggcaa
      241 ctggcgctcg gctttgtcga gatcgacgag gagcgccagg aagcctggga gtatgctgtt
      301 ctggtaacct cgctggaagc cgaggttttg accattgggc agctttaccg ggaccgggga
      361 gattgtgaga acagcttcga cgagttaaag aaccactggg gctggggcgg gtttacgacc
      421 catgacttga cgcgctgccg gatcatggca cgcattgtcg ccctcatctt caactggtgg
      481 aacctcttcg tgcgtctggc cgatcctgac catcaccgcg aggcgatcac cagtcgcccg
      541 ctgctgctgc aagcgattgg tcgacagacc aaccatgccg gacgcgccac ggtgacgatc
      601 accagctctc acggtgagcg ggatcgggcg cgccgggcgc tcacccgtat cgccgccttc
      661 ttcgccaccc tgcgcgaaac tgcggagcag ttgaccgagc tcgatcgatg gtaccgcatc
      721 ctcagtcacg ccctcgtcaa gtatctcaaa ggccgccaac tcgacccgcc acgacgctta
      781 caggcggcct gaccccgcac gcaacagttg aattgatacc ctcccaaacc caagctcctc
      841 ggctccaact gccggaaata ggatcatgcc ctatggcacc gtcaagttgg ccgagagcag
      901 gcttggtagg agccgggttg gtcgggtaaa cgggcgggat gaggacgcct cgagacccga
      961 tttacgccgg ccatcgctac cccgctgaga tcatcagcta cgcggtatgg ctgtattttc
     1021 ggttcccgtt gagcctgcgc atggtcgagg agatgctggc cgcccgcggt
//
LOCUS       DASRPQ010002285         2944 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4659609, whole genome shotgun sequence.
ACCESSION   DASRPQ010002285 DASRPQ010000000
VERSION     DASRPQ010002285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2944)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2944)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2944
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4659609"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..850
                     /locus_tag="VFD73_25865"
     CDS             <1..850
                     /locus_tag="VFD73_25865"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HZI77407.1"
                     /translation="ADRFRYDEEQARLIVSGRSNRLATTRSPDPAPQRLPNGLRPGHI
                     VTIDPGHGGVDPGNPGVFFPRGTREKDVTLQMGLLLRNELKQRGVGVQMTRTSDTLIA
                     LGDRGGYCTESCDLFVSLHVNSLARRRGYTDIRGFETYFLAEPKTEDAARVAQMENEA
                     VRFEARPTSTGTGTGLDFILKDLQLNEHLRESARAAELVQRKLQTIHAGEGRGVKQAG
                     FMVLTTARRPAILVELGYSTNPDDGRFLTSYAGQKAMAAALADAIVEYLLEYEHKTSP
                     TTDSKG"
     gene            853..2277
                     /locus_tag="VFD73_25870"
     CDS             853..2277
                     /locus_tag="VFD73_25870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77408.1"
                     /translation="MRFIRLALAATLVSTGACVYYNGMYNANRLARSARKAEREGRTF
                     QANGLWGQVATKAESVVVRHPTSKYAAEADILRGVALARMGQCDQALEPLSKLSSANI
                     SVDLQEDALLSTGRCQIAAGNIEAADAAFLQLLDSKSADHRREARYQHARVLRQSGQF
                     AEALKALPQASDPRINTERFLALAGAGQLSTAMALADSLLAQSDSTKHWDSLVVMLGE
                     ENPRAASALVDRVRKLHGRSRDAEVRLLLEDGMRLASVDTARATQRLREVMATDSTGN
                     AAVQAGLALVRLDLKRVSKPEELDRVLAALDALTRRPGMGLDEVSQLSASLREVRLAG
                     VAITPDTAQGDIRLFLAAESARDSLNAPLLAQMMFRRLPEVFPVSPYAPKAILAAQRL
                     SSAWQDSARTLLQERYADSPYLAVVRGEATDEYRRLEDSLAGFAAAQASHRPAGVRRR
                     AAVPEIEDHLPSKRPPTSKVPEPQ"
     gene            2274..>2944
                     /locus_tag="VFD73_25875"
     CDS             2274..>2944
                     /locus_tag="VFD73_25875"
                     /inference="COORDINATES: protein motif:HMM:NF013355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77409.1"
                     /translation="MSASGLTRELFGRRFQNPLLLAAGTAGFGRELDGVLDLERLGGL
                     VTKAVSLTPRQGNPSPRVAEFTGGMLNSVGLANPGVHRVSEDYLPWLASRLTRARVLV
                     NVVGFTVEEYSQVIAALGEHPAITAFELNLSCPNTSAGGIEFGADAKCIERIVSSCRA
                     RTRLPLLAKLSPVLTDIGAMGLVARDAGADGISAVNTFPGLLFDNAGGTRLGQGPGGV
                     SGPAL"
BASE COUNT          533 a          938 c          952 g          521 t
ORIGIN      
        1 cgccgaccgc ttccgctatg atgaggagca ggcacggctg atcgtctccg gccggtccaa
       61 tcgactggcc acgacccgga gcccggatcc ggcgccgcag cgccttccca acgggcttcg
      121 gcctggtcac atcgtcacca tcgatccggg ccatgggggt gtcgacccgg gaaaccccgg
      181 cgtcttcttc cctcggggaa cccgggaaaa ggatgtgaca ctgcagatgg ggcttctgct
      241 ccggaacgag ctcaagcagc gaggtgtggg cgtgcagatg acccgaacgt ccgatacgct
      301 gatcgccctc ggcgaccggg gcggctactg tacggagtcg tgtgatcttt tcgtgagcct
      361 gcacgtcaac tctctcgcgc gacggcgcgg atataccgat atccgaggat tcgagaccta
      421 ctttctggca gagcccaaaa ccgaggacgc ggcccgggtt gcgcaaatgg aaaacgaggc
      481 ggtgcgcttc gaggcgaggc ccaccagcac cggaaccggg actgggctcg atttcatctt
      541 gaaggatctg cagttgaacg agcacctacg ggaatcggcc cgggcggcgg agctggtcca
      601 acgcaaactc cagacgatcc acgccggtga aggtcggggc gtaaagcaag ccgggttcat
      661 ggtccttaca accgcccgcc gaccggccat tctggtcgag ctcgggtaca gcaccaatcc
      721 cgacgatggc cggtttctca cgtcctatgc cggccaaaag gcaatggcgg cggccttggc
      781 tgatgccatc gtagagtacc tgctggaata cgagcacaag accagcccaa cgacagactc
      841 gaagggatga gcgtgcggtt cattcgcctg gcactggcgg caactctcgt gagcaccggt
      901 gcgtgcgtct actacaacgg gatgtacaat gccaaccgcc tggctcgctc cgcccggaag
      961 gcggagcgcg agggccggac gttccaggcg aatggactgt ggggccaggt tgccacgaaa
     1021 gccgaatcgg tggtggtccg tcatccgact agcaagtatg ccgccgaggc cgacatcctt
     1081 cgcggggtcg cgctcgcccg aatggggcag tgcgaccagg cattggagcc gctaagcaag
     1141 ctctcctccg cgaacatctc cgtagatctt caggaagatg ccttgctatc taccggccgc
     1201 tgccagatcg cagccggcaa cattgaagca gcggacgcag cgttcctgca gctgctcgac
     1261 agtaagagtg cggaccaccg gcgcgaggca cgctatcaac acgcgcgagt tctccggcaa
     1321 agcgggcagt tcgcggaagc gctgaaggcg ctgccgcagg ccagcgatcc gcgcatcaac
     1381 acggagcggt ttctggccct tgccggggcg gggcagctct ccacggcgat ggcgttggcc
     1441 gattctctgc tggcccagag tgactcgacc aagcactggg attcgctggt cgtcatgctg
     1501 ggagaggaaa atccccgcgc ggcatccgcc ctggtcgacc gggttcgtaa gctgcacgga
     1561 cgatctcgcg atgctgaggt caggcttctg ttggaagacg gcatgcggct ggcatcggtg
     1621 gacacggccc gggcgacaca acggctccgc gaagtgatgg ccaccgactc caccggcaat
     1681 gctgcagttc aggcagggct ggcgctcgtg cggctcgacc tcaagcgcgt gtcgaagcca
     1741 gaggagctcg accgggtgct tgcggcgctg gacgccctga ctcgccggcc cgggatgggg
     1801 ctggacgagg tttcccagtt gagtgccagc ctgcgcgagg tgcgtctggc cggggttgcc
     1861 atcacaccgg atactgccca gggagatatt cgattgttcc tcgcagccga atcagccaga
     1921 gattcgctga acgcgccgct cctggcacaa atgatgttcc gccggctccc cgaggtcttc
     1981 cctgtctctc cctatgcgcc caaagcgatt ttggccgcac aacgtctgag ctccgcatgg
     2041 caggatagcg cacgcactct cttgcaggag cgatacgcgg acagccccta tcttgccgtc
     2101 gtccggggag aggccaccga cgagtatcgt cgactggaag actcgttagc cggtttcgca
     2161 gcggcgcaag cttcgcacag gccggccggc gttcgccggc gggccgctgt tcccgaaatc
     2221 gaggatcacc tcccgtcaaa gcggcccccg acctccaagg tgccagagcc gcagtgagcg
     2281 cttcggggct gacgcgagag ctgttcggac gccggttcca aaatcctctt cttctcgccg
     2341 caggcaccgc tggattcgga cgcgagctcg acggtgtgct cgacctcgag cgtctcggtg
     2401 gtctggtcac caaagcagtg tcgctcaccc ctcgccaggg caatccgtcc cctcgagttg
     2461 ccgaattcac cggtggaatg ctgaactctg ttgggcttgc caatccgggc gttcaccggg
     2521 tcagcgagga ctacctgcca tggcttgcgt cacgactcac ccgggctcgg gtcctggtca
     2581 acgtggttgg gtttaccgtc gaggagtaca gccaagtgat cgccgctctg ggtgagcatc
     2641 cggcaatcac tgccttcgag ctgaatctct cgtgtccgaa cacctcggct ggcggaatcg
     2701 aatttggcgc cgacgcgaag tgtatcgagc ggatcgtttc cagctgccgt gctcggacca
     2761 ggcttcctct cctcgcgaaa ttgtcaccgg tgctaaccga cataggagcg atggggctgg
     2821 tcgcccgaga tgccggcgcg gatggaatca gcgctgtcaa cacctttccc gggctgctgt
     2881 tcgacaacgc tggggggacc cgtctcggcc aaggacctgg gggcgtgagc ggcccagctc
     2941 tctt
//
LOCUS       DASRPQ010002286         1301 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4331962, whole genome shotgun sequence.
ACCESSION   DASRPQ010002286 DASRPQ010000000
VERSION     DASRPQ010002286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1301
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4331962"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..454)
                     /locus_tag="VFD73_25880"
     CDS             complement(<1..454)
                     /locus_tag="VFD73_25880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77410.1"
                     /translation="MLAQILVALLTIAVVVMVGVDLVRTGNEDPSGQHDGWGEIQPRT
                     VGGTRGDRTGVSLQEPFGTGIPAGGPNAGLGQHPGRTDPAAVDLQPARTGSLMGQGSS
                     TERDGVSHGHGGRHVRSRLQLMVVIPVAAVTVIALCIVGLVYFLSNARI"
     gene            complement(460..597)
                     /locus_tag="VFD73_25885"
     CDS             complement(460..597)
                     /locus_tag="VFD73_25885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77411.1"
                     /translation="MSVPRPRRFLVILKPGCVSPGVAGQNQDDHRMRGIVRVIPATDR
                     M"
     gene            complement(897..>1301)
                     /locus_tag="VFD73_25890"
     CDS             complement(897..>1301)
                     /locus_tag="VFD73_25890"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI77412.1"
                     /translation="RLAAASLAAGKVKDAISHYKRVLSDREKVLGPGHPDTIATTANL
                     AVAYQAAGRMPAAMQLSEQCCADSERVLGPDHADTLARLASLAHLYYTAGRVGDAIAL
                     LRDTAIRCERVLPAGDPLTQVVQQSLVNLGDG"
BASE COUNT          235 a          429 c          401 g          236 t
ORIGIN      
        1 agatccgcgc gttactcagg aagtagacca ggccgactat gcacaacgcg atgacggtga
       61 cggcagccac cggaatgacg accatcagtt gcagccggga tcggacatgc cgaccaccgt
      121 gcccatggga caccccgtcc cgctctgtgg acgagccttg ccccatgagc gagccggttc
      181 gtgcgggctg gaggtccacg gcggctggat ccgtgcgccc gggatgctga cctagcccgg
      241 cgttaggtcc gccagcgggt atgcctgtcc cgaagggctc ctggagcgac actcctgtgc
      301 ggtcaccgcg agtgccgccg acggtcctcg gctgtatctc cccccaccca tcgtgttgcc
      361 ccgacgggtc ctcgtttccg gtcctgacaa ggtccacgcc caccatgacg acgacggcaa
      421 tggtcaggag tgccacgaga atttgcgcca gcatgctact cacatccggt cggtggccgg
      481 gatcacgcgc acgatgccgc gcatgcgatg atcatcctga ttctgcccgg cgactccagg
      541 acttacgcat ccgggcttga ggatgaccag gaaccgtctc ggtcttggaa cggacatggc
      601 atcctccccg gcagcctgcc tgcgcgacat cgcatgaccg acataactct aatgtgtaac
      661 cggcttgcgc atgcggatta ctagatagag gaaaatcaga atcgttacgt taagtggacg
      721 ctacttcaca atacgccaag tttaaccatc tcgccgggct tatgtcgggt aaagtccgat
      781 ttactgccgt cgactatcga gcagagctga tgcgcggaac aatacgctgc ccggaatgcc
      841 tttcacgtgc cgggcgtact caccgtcacc atctatttac ggtgccgtta gcgagatcag
      901 ccatctccga ggttgaccaa gctctgctgt accacctggg ttagcggatc gccggcgggc
      961 agcacacgct cgcagcgtat ggcggtgtca cggagcaggg ctattgcgtc accgacccgg
     1021 cccgcggtgt agtaaaggtg agccaggcta gccagccgcg cgagcgtgtc cgcgtggtcg
     1081 gggccgagca ctcgctccga atccgcacag cactgctcgg acagttgcat cgcggccggc
     1141 atccggccgg ccgcctggta cgcgacggcg aggttcgcgg tggtcgcgat cgtgtccgga
     1201 tgccccgggc cgagcacctt ctcgcggtcc gacagcaccc gcttgtagtg cgaaatcgcg
     1261 tccttgacct tgcccgccgc caggctggcc gcggccagcc g
//
LOCUS       DASRPQ010002287         1716 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_575331, whole genome shotgun sequence.
ACCESSION   DASRPQ010002287 DASRPQ010000000
VERSION     DASRPQ010002287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_575331"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..206
                     /locus_tag="VFD73_25895"
     CDS             <1..206
                     /locus_tag="VFD73_25895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77413.1"
                     /translation="GATMHQRKPSYTPETIENWRQHFLTLQRRLPHLEVIDTTKGSAD
                     VLNQAMDRLWQEYIRRWRRDQRP"
     gene            206..1276
                     /locus_tag="VFD73_25900"
     CDS             206..1276
                     /locus_tag="VFD73_25900"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HZI77414.1"
                     /translation="MPSRDLLISIVITNYNYGRYVREAIESALAQTHSAIQVIVVDDG
                     STDESRSIIEAYGERVIPVLKENGGQASAFNAGFRLASGSAVIFLDADDTLNGDTAAK
                     VAKEFAARPELAKVHYRLELMDRNGRPTGGSTPPVGLHLSAGDLRKALRAHPDDVTYP
                     PASGNAFAVWALRRVLPMPEHEYRILADVYLLNMVPLLGPVEALPEAGGHYRVHDANS
                     HHTSSLRLDRVRATVRTIHATHGYMRKLADSLGLEGFPDPELDDRSLVFLSQRLVSQK
                     LEPELHPFPADGLRRLATEGAAAALRRADLPLGLRLLYATWFLATAAAPRPAATWLAE
                     QMLYPERRGMLSSVVERLRMRS"
     gene            1273..>1716
                     /locus_tag="VFD73_25905"
     CDS             1273..>1716
                     /locus_tag="VFD73_25905"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI77415.1"
                     /translation="MSDTRMGVAIVSYNTAGLLRRCLQSIVADTSGPVLVVDNGSDGS
                     ADLVRREFAGVRVRVEENRGYGAAANIAVTQLETPYVLLLNADTELTPGTLVALTRYL
                     DQHPRVAIAGPRIVNAGGVYERSAHHFPTPTSLLLHARWWPGPQSR"
BASE COUNT          316 a          552 c          520 g          328 t
ORIGIN      
        1 cgggggccac aatgcaccag cgaaagccct cgtatactcc ggagacgata gaaaactggc
       61 gtcagcactt cctgaccctt caacgccggc tccctcacct cgaggtgatc gatacgacca
      121 agggcagtgc cgatgttctc aaccaggcca tggatcgtct gtggcaagag tacatccgcc
      181 gctggcgacg agatcagcgc ccttgatgcc ctcacgcgat ctcctcatca gcatcgtcat
      241 cacgaactac aattatggcc gctatgtgcg ggaggcaatc gagagcgccc ttgcgcaaac
      301 gcactctgcc atccaggtga ttgtggtcga tgatggatcc accgacgagt cgcgctccat
      361 aatcgaggcc tacggtgagc gcgtcattcc cgtgttgaag gagaacgggg gccaagcctc
      421 cgccttcaat gcaggatttc ggctcgcttc cgggagcgcc gtcatcttcc tggatgcgga
      481 cgataccctg aacggcgaca ctgcggccaa agtcgccaag gagttcgcgg cacgaccaga
      541 gcttgccaag gtccactacc gtctcgagct catggatcgg aatgggaggc cgacgggcgg
      601 ctcgacacct cccgtggggc tgcatctttc agcaggcgac ttgcggaaag ctcttcgggc
      661 tcaccctgat gatgtgacct atccgcctgc gagcgggaac gcgtttgctg tttgggcgct
      721 ccgccgagtc ctgcctatgc cggagcacga gtaccgcatt ctcgctgatg tgtacctgct
      781 gaacatggtt cccttactcg gcccggttga ggcgctccca gaggcgggtg gccattaccg
      841 agtgcacgat gccaactccc accacacctc gagccttcgt ctcgaccgag tgcgagcaac
      901 ggtacgaacc atccatgcca cccacgggta catgcgcaag cttgccgact ccctgggtct
      961 ggagggattc cctgaccctg aactcgatga tcgctcgctc gtcttcctca gccagagact
     1021 cgtctctcag aagctggagc cggagctgca tccgtttccg gcagatgggc tgcggcgcct
     1081 ggcaaccgaa ggggccgccg cggcactgcg ccgggcggat ctcccactcg gtctcagact
     1141 cctttacgca acctggtttc tggctaccgc ggcagccccg cggcctgcgg ccacctggct
     1201 ggcagagcag atgctttatc cggagcgaag gggaatgctg tcctccgtgg tcgagcgcct
     1261 ccggatgcgc tcgtgagcga cacccgtatg ggtgttgcga tcgtcagcta taacactgca
     1321 gggctactac gcaggtgcct gcaatccatc gttgccgaca ccagtgggcc ggtgctcgtg
     1381 gtggataatg ggagcgatgg gagcgcagat ctcgtgcgcc gcgagtttgc gggcgtacgg
     1441 gtgcgagtgg aagagaaccg tggttatggc gcggcagcga acatcgccgt gacgcagctg
     1501 gagaccccct acgtgctcct gctgaacgcg gatacggagc tcacaccggg aacgctcgtg
     1561 gctcttaccc ggtacctcga tcagcatcca cgagtcgcga tcgcgggccc cagaattgtg
     1621 aacgccggcg gcgtgtatga gcgttcagcg catcatttcc ctactccgac atcgctcttg
     1681 ctccatgccc gctggtggcc agggccccag tctcga
//
LOCUS       DASRPQ010002288         1079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4660053, whole genome shotgun sequence.
ACCESSION   DASRPQ010002288 DASRPQ010000000
VERSION     DASRPQ010002288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4660053"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            501..>1079
                     /locus_tag="VFD73_25910"
     CDS             501..>1079
                     /locus_tag="VFD73_25910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77416.1"
                     /translation="MASNLFSHSKSKVLWSLRLLVILCLLLVSQFALLRSASAATLAS
                     DDFNRADGALGAGWTAISDGAMSISSQAVIGKVGANTGDIRTGETYPGDQFSQIQVTS
                     TPLSGGQWVAAAVRLQNSGKNGYVGLYYWNFGSPELMLFKRSNSAWTQLGAAYNSGVL
                     AAGTQLQIMAVGSTISLLQNGVTRVSVTDTSFT"
BASE COUNT          195 a          335 c          351 g          198 t
ORIGIN      
        1 atcgacgcga tcgtctccgc cgaaggcgtc gtccgctccg ccaccctcat ctcgctagcc
       61 actcaggtcc cgtatcgggt cttgcctcta gtccgggcgg cctcgcatca gcacagcttg
      121 ttacagaaag tttgtgcact aatgcacgac ttttgcaaca ttcgggtgct agtgtgacca
      181 tcagtcacgc tacgtcagcc ggatcccgcg gcctgcggcg gacgtctggc gcgatggatg
      241 tttccgtcgt agggactgga gtgatagttg tgactcaaag cggtgacgtt ggccgcgagc
      301 gcgtcgctag ccgtatcccg gtagctctag gcccggtgca cgtgacggga gcgcctgagc
      361 ggtccggtca ggcgagtacc gactaagcca atatcacata agcgcttgcc acctgagcgg
      421 cggcatcagg ggcaaggccg ggcataagca aacgctcggg cgtccgcgag aatcagcggc
      481 cgcacggtgg ggggaacaag atggccagca atctctttag ccattcaaaa tccaaagttc
      541 tgtggtcact gaggctgttg gtaatcctct gcctcctgct cgtctcgcag ttcgcgcttc
      601 tgcgaagcgc ctccgccgcg acgctggcga gcgatgactt caaccgagcc gacggtgcgc
      661 tcggcgccgg ctggacggcc atctcggacg gggcgatgtc gatctcgtcg caggctgtga
      721 tcggaaaagt cggcgcgaat accggtgaca tccgtacggg cgagacgtat cccggcgacc
      781 agttctcgca gatccaggtg acctcgacgc cgctgtcggg gggccagtgg gtcgccgcgg
      841 cggtccggct gcagaacagc gggaagaacg gctacgtcgg cctgtactac tggaacttcg
      901 gcagcccgga gctgatgctg ttcaagcgga gcaacagcgc ctggacccag ctgggcgccg
      961 cctacaactc cggggtcctg gcagctggga cgcagttgca gatcatggcg gtcggcagca
     1021 cgatctcgct cctgcagaac ggggtgacgc gggtatcggt caccgacacc agcttcacc
//
LOCUS       DASRPQ010002289         2392 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2809997, whole genome shotgun sequence.
ACCESSION   DASRPQ010002289 DASRPQ010000000
VERSION     DASRPQ010002289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2809997"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..944
                     /locus_tag="VFD73_25915"
     CDS             <1..944
                     /locus_tag="VFD73_25915"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing GNAT family
                     N-acetyltransferase"
                     /protein_id="HZI77417.1"
                     /translation="GASMSQLAAADRVRRFNRFYTRRMGLLNPGLLQSPFSLAEVRVL
                     YEIAHRERPTAKSIASTLQLDRGYLSRLLRGLRQRGLVTARAEEHDRRERRLSLTARG
                     RKAFGTLNARATDEIAAMLHGLSRSEQHDLLRSIGTIESLLNEEHAPARPVVALRNPE
                     PGDLGWVVQRHGELYAEEYGWNADFERLVAGIVGEFASAPADSGNRCWIATVDGERAG
                     CIFLVPSSPEVARLRLLLVEPWARGLGLGTLLVNQCIAAARQGGYRMLTLWTNDVLTA
                     ARRIYERAGFQLVKSESHRSFGKSLTGQNWELSLDQA"
     gene            complement(1000..2262)
                     /locus_tag="VFD73_25920"
     CDS             complement(1000..2262)
                     /locus_tag="VFD73_25920"
                     /inference="COORDINATES: protein motif:HMM:NF012632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77418.1"
                     /translation="MTYAMSSIRRSALTCLALLGALGCAEDREAPTAPQDQASQALST
                     QALFFTQVSAGASHTCGIASSGQTYCWGDNTAGELGNGTNTSSSKPVLVAGGLHFVQI
                     SAGTEYTCGVTSSNLAYCWGNNSNGQLGVASGAQSRPVAVSGGRRFQQIRAGFDHTCA
                     VTLFDVGFCWGKNRFGELGANSTVVFSPTPLRVVGGLSWKRINAGGHHSCGVTTTNLA
                     YCWGNNDGALGDGTFTDRRKPVPVVGGFKFGLVVAGGGGYTDEQNESPEDGHTCGVTT
                     DSHGYCWGQNGEGELGTGENSPSFQKTPTAISGGRSWRQVVAGWVHTCGVTNANIAFC
                     WGSNGFGQNGNGTTTGSRTPVRVSGTLAFSAVTTGPGPQLDAVYFGSHSCGITTTNRV
                     YCWGDNQAGQLGDGTNTRRLTPVAVVGP"
BASE COUNT          409 a          790 c          750 g          443 t
ORIGIN      
        1 caggagcttc catgtcacag cttgccgccg ccgaccgagt ccgccgcttc aaccgctttt
       61 acacccgccg aatgggtctg ctcaaccctg gattgcttca gagtcctttc tctctggccg
      121 aggtccgcgt gctctatgag atcgcccatc gggagcggcc taccgccaag agcatcgcct
      181 ctacgctgca gctcgatcgg ggctacctga gccggctgtt gcgggggctc cggcaacgcg
      241 gcctcgtcac cgcccgagcc gaagagcacg accggcggga gcgccgcctg tcgctcaccg
      301 cgcgaggccg gaaggcattc ggcaccctca acgcccgggc aactgacgag attgcggcca
      361 tgctccacgg cctatcacgg agcgagcagc acgatctcct tcgctcgatc ggcaccatcg
      421 agagcctgct gaacgaagaa cacgcgccag cccggccggt cgtcgcgctg cgcaacccgg
      481 agcccggtga tctcggctgg gtggtccaac gccacggaga gctgtacgcc gaggagtacg
      541 gctggaacgc agacttcgag cggttggtgg ccggcatcgt cggggagttc gcctcggcgc
      601 cggccgactc cggcaacagg tgctggattg cgacggtcga cggagagcgg gccggctgca
      661 tcttcctggt gcccagctcg cccgaagtcg ctcgcctccg tttgctcttg gttgagccct
      721 gggctcgagg tctcggactc ggcacccttc tggtgaacca gtgcatcgct gcagcccgcc
      781 agggcggcta ccgcatgctt acgctctgga ccaacgacgt gctcaccgcg gcgcggcgga
      841 tctatgagcg tgcagggttt cagttagtga agagcgagag ccaccgaagc tttgggaaat
      901 cgctgaccgg ccagaactgg gaactttcgc tcgaccaggc ataagaagac tccggcaagt
      961 cgggaactcc cgtcctgccg gagtcggaga caggtaaact cagggcccga cgaccgcgac
     1021 tggagtcaat ctcctggtgt tggttccgtc gcccagttgt ccggcctggt tgtcgcccca
     1081 gcaatagacc cggttggtgg tggtgatacc gcagctatga cttccgaagt acaccgcgtc
     1141 cagctgaggg ccagggccgg tggtcactgc gctaaaggcg agagtacccg aaacccgcac
     1201 tggcgtccgg cttccagtgg tggtgccgtt tccattctgt ccaaacccgt tgctgcccca
     1261 acaaaaggct atgttggcgt tggtgacccc acaggtgtgg acccatcccg cgaccacttg
     1321 ccgccaactg cgaccgccac tgattgcggt tggtgtcttc tggaagctcg gcgaattctc
     1381 accagttcca agctctccct ctccattctg tccccagcaa tagccatggc tgtcggtggt
     1441 gacgccgcag gtgtggccat cctcgggact ttcgttctgc tcgtcggtgt atccaccgcc
     1501 gccggccacc accagaccga acttgaagcc tcccaccacg ggtaccggct ttctccggtc
     1561 ggtaaacgtg ccatcgccca aagcgccgtc gttgtttccc cagcagtatg ccaggttggt
     1621 cgtggtcacg ccgcagctgt gatgtcctcc ggcattgatc cgtttccagc tcagcccgcc
     1681 gaccacgcgg agcggagtcg ggctgaacac caccgtactg ttcgcgccca attcgccgaa
     1741 gcgattcttg ccccagcaga agcctacatc gaacagggtc accgcacagg tatgatcgaa
     1801 gcccgcgcgg atctgctgga accttcgccc accgctgacc gccaccggcc tggattgagc
     1861 gccggaggca acccccagct gcccgttgga gttgttgccc cagcagtagg cgaggttact
     1921 gctggtgacc ccgcaggtgt actcggttcc ggcgctgatc tggacgaagt gcagcccgcc
     1981 ggccaccaac accggcttac tgctcgaggt gttggtgcca ttgccgagct ctcccgcagt
     2041 gttgtctccc cagcaatagg tctggccgct cgaggcaatg ccgcaggtgt gagaggcgcc
     2101 ggcgctcacc tgcgtgaaga agagcgcctg agtcgagagt gcttgcgagg cctggtcttg
     2161 aggcgcggtg ggtgcctcgc ggtcctcagc gcatcccagg gcgccaagca gcgcgaggca
     2221 ggtcaaagcc gaacgccgta tcgaactcat tgcgtatgtc atcggagctc tccggggagc
     2281 cttgggttac ccactggccg gcgacgtgga gccgtcgccg gtttatgtaa cgtcaagcag
     2341 caagtgttat ggcgtgtaca ggtacgacga gcccgtggcg ctggggagga ag
//
LOCUS       DASRPQ010002290         1156 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3082627, whole genome shotgun sequence.
ACCESSION   DASRPQ010002290 DASRPQ010000000
VERSION     DASRPQ010002290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1156
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3082627"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(397..846)
                     /locus_tag="VFD73_25925"
     CDS             complement(397..846)
                     /locus_tag="VFD73_25925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77419.1"
                     /translation="MLDLYLHRGSFETVLADEDGEQDADRWVSHTACGQEVFQILAQW
                     IWNLRLELGQHLAPAVVRTTEFAPAQAVSPGGGSEPTGGSEPTGSVVYGPPHWAGRSF
                     TGGFPGSAFTLQPDDTLRCPAHRPLYAQERRLERDGSLRVLYAGRIG"
     gene            complement(892..>1156)
                     /locus_tag="VFD73_25930"
     CDS             complement(892..>1156)
                     /locus_tag="VFD73_25930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77420.1"
                     /translation="DVLTSGLGLVARSKDYHLLDLALVQAVLAAPPTTICTHPESQTT
                     RMLFDCPAVPLSPAGPLVRLIVATSAATSSAPSVGERRAETVY"
BASE COUNT          256 a          323 c          404 g          173 t
ORIGIN      
        1 accatagagc aggacagcaa gcctgggagc atcagcggaa cgagcattgc gagccaggcg
       61 cagtgaccag gagagccggt agtgggcacg ctgctcacga gtcaggacgg gttcgtggtc
      121 tgcgtttgca cgctcactct ggctgaaagg ttcccaggag aaggtcacgg tttcgcgacg
      181 gatgaggcaa agccactgtc ggcgtagcag gcgacgcggc caatcgcgcc agagcagggg
      241 agcagacgga ggcaaagggg gagacgacgg cgaggagagc aggggaggga gggagagagg
      301 agcagatgag ctaggccaaa atacagcgct gacccgtcgc ggttttttgg tggaggggtg
      361 ttcttgacac cgttctcgca agggacacgc gcgacactat ccgatgcgtc ccgcatacaa
      421 aacacgcagg gagccatcac gctccagtcg gcgttcttgc gcatagagag gccggtgagc
      481 ggggcaacgt agcgtgtcat cgggttgcag ggtaaaagcc gagccaggaa agccgccggt
      541 aaacgagcgt cctgcccagt ggggaggtcc atagaccaca ctgccggtgg gctcactgcc
      601 gccggtgggc tcactgccgc cgccgggcga aaccgcttga gcaggtgcga attcggtggt
      661 gcgcaccact gccggagcca ggtgctggcc gagttcgaga cgcagattcc agatccattg
      721 ggccagtatc tgaaagacct cctgtccgca ggcggtatga gacacccaac gatcggcatc
      781 ttgctctcca tcctcatccg ctagcacggt ctcaaaggac ccgcgatgca gatacagatc
      841 cagcacatct ttcgcggtga aggcgggaga gggcagcgtc gagacgaaga gttagtagac
      901 cgtctctgcg cgccgctcgc ccaccgaggg ggcagatgac gtggccgcac tggtcgccac
      961 gatcaagcgc accagcggtc cggcaggcga gagcggcacg gcagggcaat caaagagcat
     1021 gcgggtggtc tggctttcgg gatgggtaca gatggtggtg ggaggagcag ccaacaccgc
     1081 ctgtaccagt gccagatcaa gcaggtggta atctttgctc cgcgcaacca gcccgaggcc
     1141 ggaagtcagc acatcc
//
LOCUS       DASRPQ010002291         1626 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1201025, whole genome shotgun sequence.
ACCESSION   DASRPQ010002291 DASRPQ010000000
VERSION     DASRPQ010002291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1201025"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..157)
                     /locus_tag="VFD73_25935"
     CDS             complement(<1..157)
                     /locus_tag="VFD73_25935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014327616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZI77421.1"
                     /translation="MLYVGLDVHKETIAVALAEAGLREDVREHGKIANTPAALKALTA
                     KLAGKKRG"
     gene            336..1544
                     /locus_tag="VFD73_25940"
     CDS             336..1544
                     /locus_tag="VFD73_25940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
                     /protein_id="HZI77422.1"
                     /translation="MTDDRLPLAELLAKAGDGDFLRSVAEAVVQLLMETDVEGLIGAG
                     RHERTGERTTYRNGYRDRSLDTRLGSLQLRIPKLRQGSYFPPFLEPRKTSEKALVAVI
                     QEAWVGGVSTRRVDDLVQAMGLSGISKSTVSKLCKDIDDRVSAFLDRPLSGDWPYLWL
                     DATYLKQREGGRIVSVAAIIAVAANTEGKREIVGLHIGPSEAETFWSTFLKSLVRRGL
                     RGVKLVISDAHEGLKAAIRRVMGASWQRCRVHWMRNALAYVGKAQQSMVSAALRQAFI
                     QPDRAGASQMLRHTADQLRGTWPKLAAFIDDSEADVLAHMDFPLQHRAKIHSTNPIER
                     LNKEVKRRADVVGIFPSEAAIIRLVGAVLLEQNDEWQTQNRYMQTEPMAELAPPAIDV
                     FPPQITTAAA"
BASE COUNT          295 a          557 c          506 g          268 t
ORIGIN      
        1 gccctctctt cttaccggcc agcttcgctg tcagcgcctt caacgctgca ggcgtgttgg
       61 cgatcttgcc gtgctcgcgc acgtcttccc gtaagcccgc ttcggccaag gcgacggcta
      121 tggtttcctt gtgcacatcc aggccgacat agaggatagg ttagcgtccc cgcccgtggt
      181 ggaaattgtc tgactgctgc gggtgggatt gggcctggag gtcggcgtag ccggccggag
      241 gggccgatcc cacccgcgca cccggcttga agtggccatc ggatcgaacg gctacggtgg
      301 aattgcaaag cttcaaccga gcccaagagg acccgatgac cgacgacaga ctacccctgg
      361 cggaactgct ggccaaagcc ggcgatggcg atttcctccg cagcgttgcc gaggcagtgg
      421 tgcagttgct catggagacg gatgtggaag ggctaatcgg cgcagggcgg cacgagcgta
      481 ccggcgaacg caccacctac cgcaacggct accgcgaccg atcgctggac acccggctcg
      541 gcagcctgca actgcgcatc cccaagctcc ggcaaggctc ctacttcccg cccttcctgg
      601 aacccaggaa gacctcggag aaggccctgg tggccgtcat acaagaagcc tgggtcggcg
      661 gcgtctccac ccgccgcgtc gatgacctgg tgcaggccat gggcctgagc ggcatctcca
      721 agagcacggt gagcaagctg tgcaaggaca tcgacgaccg cgtgagcgcc ttcctggacc
      781 gccccctgag tggtgactgg ccctatctct ggctcgacgc gacctatctc aagcagcgcg
      841 agggagggcg catcgtctcg gtggccgcaa taatcgctgt ggccgccaac accgagggca
      901 agcgcgagat cgtcgggctg cacattggcc cctccgaggc cgagaccttc tggtccacct
      961 tcctcaagag ccttgtccgt cgcggcctgc gcggggtgaa gctggtcatc tccgacgctc
     1021 acgagggcct caaggcggcc atccgccggg tgatgggcgc gtcctggcag cgatgccgcg
     1081 ttcattggat gcgcaacgcc ctcgcctatg tcggtaaggc ccagcagagc atggtctcgg
     1141 ccgcgctccg ccaggcattc atccagcctg atcgggccgg ggccagccag atgttgcgcc
     1201 acaccgccga ccagctccgc ggcacgtggc caaagcttgc cgccttcatc gacgacagcg
     1261 aggccgatgt gctcgcccat atggacttcc cgctccagca tcgagccaag atccattcca
     1321 ccaacccgat cgagcgcctg aacaaggagg tcaagcgtcg ggccgacgtc gtcggcatct
     1381 tccccagtga ggcggcaatc atccgcctgg tcggcgccgt gctgctggag cagaacgacg
     1441 agtggcagac gcagaaccgc tacatgcaga ccgagccaat ggctgaactt gcaccgccag
     1501 cgatcgacgt ctttccaccg cagattacca ccgcagccgc atgatccccg gccacctcaa
     1561 gccaacggca aattccacca cgttgacgga cgtgatcggg gtcgccagcc cccgggccgt
     1621 gttctg
//
LOCUS       DASRPQ010002292         1126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1859723, whole genome shotgun sequence.
ACCESSION   DASRPQ010002292 DASRPQ010000000
VERSION     DASRPQ010002292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1859723"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(15..>1126)
                     /locus_tag="VFD73_25945"
     CDS             complement(15..>1126)
                     /locus_tag="VFD73_25945"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HZI77423.1"
                     /translation="GSYRFPLCPASWHYLAPARSLQDGPVATALPPGARYVGYRTESG
                     KLAVLDARCAHVGSDLSKGAVTGECLRCPLHGWEYDAGGTCVRIPAGAEIPRWARQAT
                     YPVEQIGGHVFFFNRPQATFPFPTFAGIDWAALHPARPFELVVDAPWHVVSANGFDLQ
                     HFRFSHDRELIGDPRIDAPHALARRLVARFRVVGRSWRDALTRSCSGPELTMTVTDWV
                     GSLVLVTAQFSRTTSYGLVTLRPLDQGRTLARVIVFVRRRASGSGHLLNPLEAMDGLD
                     AWIRRGFIRAFLQPDVELTAGVTYHPRRLIGPDQILRDHLEWLEHVHASPGPAPSQGP
                     SQPHPSNTAPSPRPSPSPSQSQTQAQAQAQRQAAL"
BASE COUNT          218 a          374 c          363 g          171 t
ORIGIN      
        1 cagcaatcgt ttcgtcataa ggcagcttgg cgttgggctt gggcttgggc ttgagtttga
       61 gattggcttg ggcttgggct ggggcgcggg cttggggcgg tgttcgaagg gtgaggttgc
      121 gacggacctt ggctcggggc cggtccgggc gacgcgtgca cgtgctccag ccactccaga
      181 tggtcccgca ggatttggtc cgggccaatc aatcgacgcg gatgataagt cacccccgcc
      241 gtgagctcca cgtccggctg gaggaaggcc cggataaagc cgcgccggat ccaggcatcc
      301 aacccatcca tcgcttccag cggattcagc agatggccgg accccgacgc ccggcggcga
      361 acgaacacga tcactcgcgc caaggtccgg ccctgatcca acggccgcag cgtcaccaat
      421 ccataggagg tggtgcgcga gaattgagcc gtgacgagga caaggctgcc gacccagtcg
      481 gtgacggtca tggtcaactc cggtcctgag cagctgcggg tcaatgcatc ccgccacgat
      541 cgcccgacga cccgaaatcg ggccacgagc cgccgggcca gggcatgcgg ggcatcgatc
      601 ctcggatccc caatcagctc gcggtcatgc gaaaatcgaa agtgctgaag atcgaatccg
      661 ttcgcgctga ccacatgcca gggagcatcc accaccagct caaacgggcg cgccggatgc
      721 agcgccgccc agtcgatgcc ggcaaaggtc ggaaatggaa acgtcgcctg cgggcggttg
      781 aagaaaaaca cgtgcccccc gatctgctcc accggataag tcgcctgccg cgcccagcgt
      841 gggatctccg ctccagcggg gatgcgcacg caggtcccgc cggcgtcata ctcccaacca
      901 tgcaacgggc aacgcaggca ctccccggtc acggctccct tggacagatc ggacccgaca
      961 tgggcacaac gcgcgtccaa cactgccagc tttccgctct ccgtccgata ccccacatac
     1021 cgcgcgccgg gcggcagggc ggttgccacc ggtccatctt gaagcgaacg ggccggcgcc
     1081 aggtaatgcc acgaggccgg gcagagtgga aatcggtaac tccctg
//
LOCUS       DASRPQ010002293         1175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2810292, whole genome shotgun sequence.
ACCESSION   DASRPQ010002293 DASRPQ010000000
VERSION     DASRPQ010002293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2810292"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(152..637)
                     /locus_tag="VFD73_25950"
     CDS             complement(152..637)
                     /locus_tag="VFD73_25950"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI77424.1"
                     /translation="MLTIVDGSTGESVLQARTLFQEYAASIGVDLCFQGFQEELATLP
                     GNYAPPAGRLLLAFDDDAVAGCVALRPLEPGICEMKRLYVRPAFRGIGVGCLLVQRII
                     EEGRRAGYQRMRLDTLPSMEAAIGLYRQFGFSEIPPYRANPVESALFLELLLSPVLSD
                     S"
     gene            complement(631..>1175)
                     /locus_tag="VFD73_25955"
     CDS             complement(631..>1175)
                     /locus_tag="VFD73_25955"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZI77425.1"
                     /translation="LTARNLEGIWSDICNVARVLDLRDRAEELISHLEARLELLRKKR
                     PATNPRVLCLEWLDPPYLAGHWVPDLVAAAGGHDVGARSGSHSSWRSWAELTTLRPDC
                     LLVMLCGFGVDRARVDLENLESADALELFRRIPTWIVDANSYTSRAGPRVVEGAEQIW
                     SVFAGHAMPGIERWEPAAVC"
BASE COUNT          243 a          383 c          348 g          201 t
ORIGIN      
        1 cccattgaga ctggcaaagg agtttccggc gacatcggcc tccaccgagt cggcaaactt
       61 ctcggcttcg gcacgccaga tccgaccggg agccgcctcg aacgatgagg gacctggcgt
      121 atccagcagc gtcttcagaa aagcgatcga ttcaggagtc actgagtacc gggctcaaga
      181 gcaattcgag gaacagtgcg gactctaccg ggttggcccg gtagggtggt atttcggaga
      241 acccgaactg ccggtacaag ccgatggctg cttccatgct cgggagagta tcgaggcgca
      301 tccgctggta tccggccctc ctgccttcct cgatgatccg ttgtaccagc aggcaaccca
      361 ctccgattcc ccgaaatgcc gggcggacat acagtcgctt catctcgcaa atccccggct
      421 ccagcggacg cagtgcgaca cagccggcga ccgcgtcatc gtcgaacgcg agcaggaggc
      481 ggccggcagg aggagcgtaa ttacccggca gcgtggccag ctcctcttga aagccctgaa
      541 aacagagatc cacgccaatg gaggcggcgt attcctgaaa gagggttcgc gcctggagca
      601 cgctttctcc ggtagatccg tctacgatcg tcaacatacc gctgcaggct cccaccgctc
      661 tattcctggc atcgcatgtc cagcgaacac cgaccatatc tgctcggcac cttcaaccac
      721 ccgcggcccg gcccgtgagg tgtaggagtt tgcatccaca atccaggtgg gaatccggcg
      781 aaaaagctcc agcgcatccg cagattcgag gttctccagg tccacccgcg ctcggtccac
      841 gccaaagccg cacagcatca ccagcaggca atcgggcctc aatgtcgtga gctcggccca
      901 ggagcgccag ctggagtgac tgcccgatcg agccccgaca tcgtggccgc cggcagccgc
      961 aaccaagtcg ggaacccagt ggccagcgag atatggcggg tccagccatt ccaggcagag
     1021 tactcgtggg ttggtggccg gccgcttctt ccggaggagc tccagccgag cttccaggtg
     1081 cgagatcagc tcctctgccc gatccctgag atcgaggacc cgggcgacat tgcatatgtc
     1141 actccagatg ccctctaggt tacgggcagt gagag
//
LOCUS       DASRPQ010002294         3948 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4660563, whole genome shotgun sequence.
ACCESSION   DASRPQ010002294 DASRPQ010000000
VERSION     DASRPQ010002294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3948)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3948)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3948
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4660563"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..403)
                     /locus_tag="VFD73_25960"
     CDS             complement(<1..403)
                     /locus_tag="VFD73_25960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77426.1"
                     /translation="MRTIISRIIGRQPGYAAALLIAIMGCRDITAPESESAPLFITAS
                     DSAPSAPFLAMAGDIAGCGVNYKDEVTALLVDSLLRTNPLARAVAVGDVAYMHGSARD
                     FLCYDASWGRFKDRTWAVPGNHEYNQDTSATG"
     gene            757..1167
                     /locus_tag="VFD73_25965"
     CDS             757..1167
                     /locus_tag="VFD73_25965"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZI77427.1"
                     /translation="MSEIDSAAISRAVEASWRETMAAAGSLDPERVRAGYVDRPLVAV
                     NGHIVEDYDRDAFPSIKSWLHSLRHLDARYDQVHVQVLSPDAAVATMMHHVKWTDSAG
                     TPGEWNSAWTAVFRQVDGRWKIAYSHESTEPAGR"
     gene            1249..3315
                     /locus_tag="VFD73_25970"
     CDS             1249..3315
                     /locus_tag="VFD73_25970"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HZI77428.1"
                     /translation="MLSLGLLLVLQASPAQTPHPFRVEDMQKLRRVREAVLSPDDRWI
                     AYAVQTSDTAKNKSITNLWLISSNGGTPLQLTFAEQGSNAGIRWAPDSKSLYFLSSRD
                     SGTPQVFNLALGGGEARQITHFAIGVSSFLVSPDGKTLAITASVFPECRDLGCNEKKK
                     KEFEDRTVKVRTITSLPFRRWDEWVDGKRNHIFVMPLDGGGDPKDITPGDADTPIWTE
                     SGSDEVAFSPDGRELAVSRFTENEALTGNSDLYLIPVEGGQAKQITTSKGSDATPLYS
                     PDGRYIAYLATLRPGVASDATRLFLYDRRTGQTRNLTEPLDRSIASHWWSPDSKTLYI
                     SFEDRGLVPVARIEVESGRVTRLFSDGVSGNIQPSTDGSFVIFTNTNFSRPNELFRVD
                     PKGTGKAEQLTFENQSLLKDVQFGEYSSFSFVGAHGDSVQSWRVLPPGFDPKKKYPLL
                     LMMHGGPENAWDNLFHFRWNAQLFAAAGYVVIAPNFHGSTGFGLKFMDAIKGDWGGAP
                     YQDQMKAVDVALRWPYIDSTRLGAAGASYGGYMANWVEGHTDRFRAIVSHDGLFDILA
                     MFYSTDVPGWLPSELKGTPWEDQRPLLSQAPITYARNFKTPMLVIHGEHDYRVDPSQG
                     YAMFQVLQAMHVPSKLMVFEDANHWVTKPADNILWYHAVLDWLDHWVKPEREVWLTMR
                     RNEAPK"
     gene            3318..>3948
                     /locus_tag="VFD73_25975"
     CDS             3318..>3948
                     /locus_tag="VFD73_25975"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI77429.1"
                     /translation="MGDLLTRIQAALASRYRVEREIGAGGMATVYLAQDLRHQRNVAV
                     KVLRPELAAILGGERFLHEIRLTAQLQHPHILSLLDSGEAGGFLYYVMPYVEGESLRS
                     RLSREHQLPIEDAVRIAREAADALDYAHRHGIIHRDVKPENILLTEEHALVADFGIAK
                     ARGSGAAGQRGSEADEGLTETGFSIGTPAYMSPEQAAGERSLDGRTDIYS"
BASE COUNT          763 a         1236 c         1259 g          690 t
ORIGIN      
        1 atcctgtcgc cgacgtgtcc tggttgtact cgtgattccc cggcacggcc caggtccggt
       61 ccttgaaccg cccccagctc gcgtcatagc acagaaagtc cctcgcgctc ccgtgcatat
      121 aggcgacgtc accgaccgca acggcccggg ccagcgggtt ggtgcggagc agggagtcga
      181 cgagcagcgc cgtcacctcg tccttgtagt tgacgccaca gccggcaatg tcaccggcca
      241 tggccagaaa cggcgccgac ggagcgctgt ctgaggcggt gatgaacagc ggagcgcttt
      301 cggattccgg ggcggtgata tcgcggcagc ccattattgc gatcagaagc gcggcagcgt
      361 aacccggctg tcgcccgatt attctggaaa tgattgttct cacggcaacc tctctgctaa
      421 tcagtagtga tctttgttga gtccaatctc tgagatcgag tcaagtcagg gtcaagcagg
      481 tggagagctt cgagttctgt aagagatggg ttatctggga ggaggcctat cgcgtctatc
      541 gaggcgattc ggctgggaac tgcagggtct gcgttcgtcg gagcaccgct agagccgttt
      601 cagtgctggc cagcgggcgg atcgggtgac agattcgaag atcctcctca agagcgctgc
      661 atagtcatga atcctttcag gctcaggctc gtgtgctccc tgatattggt tactggcgtc
      721 ccggccactg catgtcgctc cagaacgacg acggcggtgt ccgaaatcga tagtgccgcg
      781 atcagccgcg cagtcgaagc atcctggcgg gagacgatgg cggctgcggg atcgttagat
      841 cctgagcggg ttcgtgcggg ctatgtggat cggccattgg tcgccgtcaa cggacacatt
      901 gtcgaagact atgaccgcga cgccttcccc tcgatcaaga gctggctgca ctccctgcgc
      961 cacctcgacg cgaggtacga tcaggttcat gtccaggtcc tgagccccga tgccgccgtt
     1021 gccactatga tgcatcacgt gaagtggacc gattccgccg gtacgccggg cgagtggaac
     1081 agcgcctgga ccgcggtgtt ccggcaggtg gatggccggt ggaagatcgc ctattcgcac
     1141 gagtccactg agccggcggg cagataaagt cgagtgcctc aaccagagtc cactcgcgga
     1201 gagacggaca gacggagagt catattccct tccaaggaga agtcgtagat gctgagtctt
     1261 ggattgctcc tggtgttgca ggcttcaccg gcccagacgc cgcatccctt ccgggtcgag
     1321 gacatgcaga agctccggcg agtgcgggaa gcggtgcttt cacccgacga ccggtggatc
     1381 gcctacgcag tccagaccag cgacaccgcg aagaacaagt cgatcaccaa tctttggctg
     1441 atttcgtcca acggcggcac gcctttgcag ctgaccttcg ccgagcaggg ctccaacgcc
     1501 ggcatccgct gggctccgga ttcgaaatcg ctctacttcc tcagcagccg agacagcggg
     1561 acaccgcagg ttttcaacct cgccctcgga ggcggtgaag cgcgccagat cacccacttc
     1621 gcgatcggag tgagctcgtt cctggtctcg cccgacggaa agaccctcgc catcacggcg
     1681 tcggtgttcc ccgagtgccg agatctgggc tgcaacgaga agaagaaaaa ggaattcgag
     1741 gaccggacgg tgaaggtgcg gaccatcacc agtcttccct tccggcggtg ggacgaatgg
     1801 gtcgacggaa agcggaacca catcttcgtc atgcccctgg acggaggagg cgatccgaaa
     1861 gacatcactc caggcgacgc ggatacgccg atctggaccg agagcgggag cgacgaggtc
     1921 gccttctcac ccgacggccg agagctcgcg gtttcgcgct tcaccgagaa cgaggcgctg
     1981 accggcaaca gcgatctcta cctgattcca gtggaaggcg ggcaggcaaa acagatcacg
     2041 acgagtaagg gcagcgatgc gaccccgctc tattcacccg acggccgcta tatcgcctat
     2101 ctcgcgaccc tccggccggg tgtcgcctcc gacgccaccc gattgttcct ctacgaccgg
     2161 aggaccggcc agacccggaa cctcacggag ccgctggacc gctcgatcgc gtcgcactgg
     2221 tggagtcccg acagcaagac gctctacatc tctttcgagg accgcggcct ggtaccggtc
     2281 gcccgaatcg aggtcgagag cggccgagtc actcgactgt tctcggacgg cgtgagcggg
     2341 aatatccagc cctcgaccga cggctcgttc gtgatcttca ccaacaccaa cttctctcga
     2401 cccaacgagc tgttccgggt ggacccgaag ggtacgggaa aggcggagca gctcaccttc
     2461 gagaaccaga gccttctgaa ggacgtccag ttcggcgagt actcttcgtt cagcttcgtg
     2521 ggcgcccacg gcgactcggt gcagagctgg cgagtcctgc cgccggggtt cgatcccaag
     2581 aagaagtatc ccttgctgct catgatgcac ggcggcccgg agaacgcgtg ggacaatctc
     2641 tttcacttcc gctggaacgc gcagctcttc gccgccgcag gctacgtggt gatcgctccc
     2701 aacttccacg gatcgaccgg cttcggcctc aagttcatgg acgcgatcaa gggcgactgg
     2761 ggcggcgcgc cgtaccagga ccagatgaaa gccgtggacg tggccctccg ctggccctac
     2821 atagactcga ctcggctggg agcggcgggt gcgagctacg gcggctacat ggcgaactgg
     2881 gtggaggggc acaccgaccg gttccgcgcg atcgtgagcc acgacggcct gttcgacatc
     2941 ctggcgatgt tctattccac cgatgtgccc ggctggttgc cctcggagct caagggaacc
     3001 ccgtgggaag accagcggcc gctgctctcg caggcaccga tcacgtatgc caggaacttc
     3061 aagaccccga tgctggtgat ccacggggaa catgactacc gggtcgatcc cagccagggg
     3121 tacgcgatgt tccaggtgct gcaggcgatg catgtcccct cgaagctcat ggtcttcgag
     3181 gacgcgaacc attgggtgac caagccggcc gacaacattc tctggtatca cgcggtgctc
     3241 gactggctgg accactgggt gaagcccgaa cgggaggtct ggctcacgat gcggaggaac
     3301 gaggcgccga agtaactgtg ggagatctcc tgacgcggat tcaggcggcg ctggcgagcc
     3361 gctatcgggt cgagcgggag atcggcgccg gaggaatggc cacggtttac ctcgcgcagg
     3421 atctgcgtca ccagcgcaac gtggcggtga aggtgcttcg gcccgagctg gcagccattc
     3481 tcggtggcga acgattcctc catgagatcc gcctcaccgc ccagttgcag cacccgcaca
     3541 tcctgagtct cctcgactcc ggcgaggcag gcgggttcct ctactacgtc atgccctacg
     3601 tcgagggcga gagcctccgg tcgcggctca gccgagagca ccagctcccg atcgaagatg
     3661 cggtgcggat cgcccgcgaa gctgccgatg cactcgacta cgcccaccgg cacggcatca
     3721 tccatcgcga cgtcaagccg gaaaacatcc tgctgaccga agagcacgcg ctcgtcgccg
     3781 atttcgggat agcaaaagcc cggggcagcg gggcagcagg gcagcggggc agtgaggccg
     3841 acgagggtct gactgagacg ggattcagca tcgggacccc ggcgtacatg agcccggagc
     3901 aggccgccgg cgagcgctcg ctcgacggcc gcaccgacat ctacagcc
//
LOCUS       DASRPQ010002295         1085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3082871, whole genome shotgun sequence.
ACCESSION   DASRPQ010002295 DASRPQ010000000
VERSION     DASRPQ010002295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3082871"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..307)
                     /locus_tag="VFD73_25980"
     CDS             complement(<1..307)
                     /locus_tag="VFD73_25980"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HZI77430.1"
                     /translation="MHSFLLISGIGVAVVGGGAAKIQAQAPLQAVIVVRHAEKAATPK
                     ENPPLSPAGEARAQALLEALRDAGLTTIITTDQQRTRLTAAPLLEALHLQAQIVPRTE
                     "
     gene            complement(337..>1085)
                     /locus_tag="VFD73_25985"
     CDS             complement(337..>1085)
                     /locus_tag="VFD73_25985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77431.1"
                     /translation="TTSHIDFMPRPHVLGIRQLDLLLPIPSWDIIADESGSIFRDRDW
                     QTATFEWRPLGGDFQSGAHFEVNIQRFFDAPPDSFAIFPGATVAPGRYWWTRGELQYQ
                     TSASHPFSLGSLLSWGHFYNGRSTELDLQGDWRGGGHVILGATLSRNRVSLPAGKFTA
                     TLVTGRLEYAFNTRISFLGFVQYDNENERVDFNLRFHWIPQIGDDLFVVWNSGYTTDA
                     DAPHRFPSLRSLGRPLNGALVLKAVHRFAL"
BASE COUNT          208 a          330 c          341 g          206 t
ORIGIN      
        1 tttccgttct gggaacgatc tgcgcttgaa gatgcaacgc ttccaggagc ggggccgccg
       61 tcaaccgggt gcgctgctga tcggtcgtga tgatggtggt gagcccggcg tctcgaagcg
      121 cctccagcag cgcttgggct cgggcctccc ctgccggact gagcggcgga ttctccttcg
      181 gggtggcggc cttctctgcg tgacggacca cgatcaccgc ctgcaacggt gcctgggctt
      241 ggatctttgc ggcgccccct ccaacaactg cgactccgat gccgctgatc aacaagaagg
      301 aatgcattct tgctccgggc tttcctgtac ccgctctcat agggcaaacc gatggaccgc
      361 cttgagcacg agcgctccgt tcagtggccg gccaaggctc cggagactgg gaaaccgatg
      421 cggcgcatca gcgtcggttg tatagccgga gttccagacc acgaagagat catcgccgat
      481 ttgcgggatc caatgaaatc tcaggttgaa gtccacgcgc tcgttctcat tgtcgtactg
      541 cacaaagccg aggaaggata ttcgggtgtt aaaggcgtac tccagcctgc ccgtcaccag
      601 cgtcgccgtg aactttcctg ccggcaaact gacccggttc ctcgaaaggg tggcgccgag
      661 gatcacgtgg ccacctcccc gccagtcccc ctgaaggtcc agctcggtgc tcctgccatt
      721 atagaagtga ccccagctca gcagtgagcc aaggctgaaa ggatgactcg cggaggtctg
      781 gtactgcagc tctccccggg tccaccagta ccggcccgga gccaccgttg ctccgggaaa
      841 gatggcgaag ctgtccggtg gtgcatcgaa gaagcgctgg atgttgacct cgaaatgggc
      901 accagattgg aagtcgccgc cgagggggcg ccactcgaac gtcgcggtct gccaatcccg
      961 gtctcggaag atggacccgg actcatccgc gatgatatcc cagctcggga tgggcaagag
     1021 gagatccagc tggcggatac cgaggacgtg gggacgaggc atgaaatcga tatgcgacgt
     1081 cgttt
//
LOCUS       DASRPQ010002296         1889 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2173473, whole genome shotgun sequence.
ACCESSION   DASRPQ010002296 DASRPQ010000000
VERSION     DASRPQ010002296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1889)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1889)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1889
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2173473"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(16..1341)
                     /gene="mnmE"
                     /locus_tag="VFD73_25990"
     CDS             complement(16..1341)
                     /gene="mnmE"
                     /locus_tag="VFD73_25990"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF003661.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HZI77432.1"
                     /translation="MLDDPIAALATPPGRSALAVIRLSGTGAWEIARRVIGKFSPAPP
                     RHATLAVFYDAEGQPIDQGIYTVYPAPYSYTGEDLVELSCHGGLLAPFRVLAALHSAG
                     ARPAAPGEFTRRAVLNGKLDLLKAEAVGDLIDATAPAQAAAALRQLEGGLSRRLLQLR
                     EALVEAQALLSYDIDFPEEDDGAVPLEQIFRHLESVKGRIGQLLSTAPSAERLREGAL
                     LVFAGRPNAGKSSLFNALLGAERALVTEVAGTTRDAVEAYTDFLGWPVRLADTAGLWE
                     APDKVDRLGVEVSRRYLLAADLVLLCVEAGRDLGEDEAPILRERPSLLVRTKADLVSR
                     SGEGLAVSVITGEGLDSVRRTAAERVFGEQLALGDLEPALTRERHRTALTRAQEALAA
                     ALPHLTREGDVVLAAHHLRNATLALDELLGAVDVEEVLDRVFASFCVGK"
     gene            complement(1354..>1889)
                     /locus_tag="VFD73_25995"
     CDS             complement(1354..>1889)
                     /locus_tag="VFD73_25995"
                     /inference="COORDINATES: protein motif:HMM:TIGR03592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YidC/Oxa1 family membrane protein insertase"
                     /protein_id="HZI77433.1"
                     /translation="VQPLMKEIQERHKNDPQKVQQEMFKLYKEHGVNPLGGCWPMLLP
                     MPVLFALFFVFQNTIELRGASFLWLPDLSRPDPLYIIPVVMGLSMFGLSKVGQIGMEP
                     NPQARMMLYIMPVMMTFLFLNFASGLNLYYAVSNLASIPQQWLLARERRKRTAKAIVE
                     VKTKDTETPARRAKRKA"
BASE COUNT          367 a          612 c          585 g          325 t
ORIGIN      
        1 cggcgtaagg tcctgctatt tccctacaca aaagctggcg aacacccggt ccagcacctc
       61 ctcgacatcc acggctccga gcagctcgtc cagcgccaaa gtcgcgttcc gaagatgatg
      121 tgcagccaac acgacgtccc cctctcgtgt cagatgggga agagcggcgg cgagggcctc
      181 ctgggctcgg gtgagagcag tccgatggcg ctcgcgggta agcgccggtt ccaggtcgcc
      241 cagggcgagc tgctcgccaa atacccgttc ggcagccgtc ctccgcacgg aatcgagtcc
      301 ctctccggta atcaccgaga ccgctaatcc ctcgccagac cgagacacca ggtctgcctt
      361 ggtgcgcacc agcagggacg gccgctctct cagaatcggc gcttcgtctt cgccgagatc
      421 gcggcccgcc tcgacacaga gcaataccag atcggccgcg aggagatagc gtcggcttac
      481 ctccacgccc agtcgatcga ccttatccgg agcctcccag aggccggcgg tgtcggccag
      541 ccgaaccggc cagccgagga aatcggtata agcctccacc gcgtcacgag tggtcccggc
      601 aacctcggtg acaagtgccc gctcggctcc gagcagcgcg ttgaagaggg atgattttcc
      661 ggcattcggc cgtccagcga agaccagcag cgccccttca cgaagtcgct cggccgatgg
      721 cgcggtggac agaagctgcc cgatcctccc cttcaccgat tccaggtgcc gaaagatctg
      781 ctccagcgga acagctccgt cgtcttcctc cgggaaatcg atgtcatagc tgaggagagc
      841 ttgtgcctcg accagcgctt cccggagctg aagcagacgg cgggacagtc cgccctccag
      901 ctggcgcaat gccgcagcag cctgcgccgg cgccgttgcg tcgatgaggt cgcccaccgc
      961 ttcagctttc aggagatcga gcttcccatt caggacggcg cgtcgagtga actcaccggg
     1021 agcggcggga cgggcgccgg cgctatgcag tgccgcgaga accctgaacg gcgcaaggag
     1081 acctccatgg caggagagct ccaccaagtc ctcaccggta tagctatagg gagcggggta
     1141 gacggtgtag atgccctgat caatcggctg accttcggca tcgtagaaca cggccaatgt
     1201 ggcatgccga ggaggagccg gggaaaattt gccgatgact cgccgagcga tttcccaggc
     1261 ccccgtacca ctcaatcgga tcacggcaag tgccgaccgc ccgggaggtg tagccaaggc
     1321 ggcaatcggg tcgtccagca ttccgtgctc cgctcaggcc tttcgcttgg ctcgcctcgc
     1381 gggcgtctcc gtatccttgg ttttgacctc gacaatggcc ttggcggtgc gcttccgccg
     1441 ctctctggcg agcaaccact gctgagggat gctcgccagg ttactgaccg cgtaatagag
     1501 gttgaggccg gaggcaaagt tgaggaaaag gaacgtcatc atcaccggca tgatgtacag
     1561 catcatcctg gcctgtgggt tcggctccat gccaatctgc ccgaccttgc tcaggccgaa
     1621 catggagagt cccatgacca cggggatgat gtagagcggg tcggggcgcg agagatcggg
     1681 cagccataaa aacgacgctc cccggagctc gatggtattc tggaacacga agaagagggc
     1741 aaacaggacg ggcatgggga gcagcatcgg ccagcaaccg cccaggggat tcaccccatg
     1801 ctccttgtac agcttgaaca tctcctgctg caccttctgc gggtcgttct tgtggcgctc
     1861 ctggatctcc ttcatgaggg gctgcacgg
//
LOCUS       DASRPQ010002297         1451 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1859966, whole genome shotgun sequence.
ACCESSION   DASRPQ010002297 DASRPQ010000000
VERSION     DASRPQ010002297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1451
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1859966"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..686)
                     /locus_tag="VFD73_26000"
     CDS             complement(81..686)
                     /locus_tag="VFD73_26000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77434.1"
                     /translation="MARSGVSITVALLIPTLVHAQSASEAHAAPPSAEQQIAAAVLPA
                     PKDMRDDATVLGYAADGRLTTLRRGKGALICLASDPKSDRFHVACYHRSLEPFMARGR
                     ALRARGVKGDTVDSLRFAEVRSGKLAVPHHPAVLYSLTGPAGSFDSATGTAPKAQPLF
                     VVYVPFATEKSMGLSTTPVEGAPWIMDPGTPKAHLMFEPKM"
     gene            complement(1210..1282)
                     /locus_tag="VFD73_26005"
     tRNA            complement(1210..1282)
                     /locus_tag="VFD73_26005"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1247..1249),aa:Lys,seq:ctt)
     gene            complement(1322..1393)
                     /locus_tag="VFD73_26010"
     tRNA            complement(1322..1393)
                     /locus_tag="VFD73_26010"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1358..1360),aa:Glu,seq:ttc)
BASE COUNT          283 a          448 c          469 g          251 t
ORIGIN      
        1 gagccccgtc gaacgtgacc ggggccctgg ctcaggagac aacctggcgc gggaggggac
       61 aaaacggccg gtcgtcgcag ctacatcttg ggttcgaaca tgagatgagc cttcggcgtg
      121 cccggatcca tgatccaggg ggcaccttca acgggagtcg tggagaggcc catcgacttt
      181 tccgtggcaa agggaacgta gaccacgaaa agcggctggg ccttcggcgc ggtcccggtc
      241 gcggaatcga agctgccagc gggaccggtg agggagtaga gcaccgccgg gtgatgcgga
      301 accgcgagct tgcccgagcg cacctcggca aagcggagac tatccaccgt gtcgcccttc
      361 actccgcggg ctcgcagcgc tcggccccga gccatgaacg gctcgagtga gcgatgataa
      421 caggcgacat ggaagcgatc cgatttggga tcactcgcga ggcagatcag cgcgcccttg
      481 ccgcgccgga gcgtggtaag gcggccgtca gcagcatacc ccagcacggt ggcatcgtcc
      541 cgcatatcct ttggtgcggg gagcacggcg gcggcgatct gctgctcggc gctcggtgga
      601 gcggcgtggg cttcggaagc gctctgggcg tgaaccagcg tagggatgag aagcgccacg
      661 gtgatcgata ctcctgatcg agccatgact cagcctttca ttcgtcggtt gcttgattgc
      721 ggagcagtct ggattaggaa cagaacggta gcaggaagct aaaccggtgc cgagaggtcg
      781 tggtgatctg cagtggcggt gggtcacttg gactcagcga gcattggtag gattactggc
      841 gggacctttc ctccttcggg tgccacgcaa ccgctacgct cgcgccaccc agcgacgaga
      901 tccactggcg gttgctgcgc gccctcagga ggaaaaggtc ccgccagtag cgactttgca
      961 tcccaacacc cggttgagca ctgtttctca accccaatgg tggggtggcc ggcacgggga
     1021 tgccctgcag cgcacgcagc aaccgccagc accgcgaggc gcgctgcggc gggagcgtag
     1081 cggttgcgtg gtgcgcggaa gggcacacct gccggccacc ataaacacgt aggtctcatc
     1141 agctccaact ttggttagca aataaaaaag cgacccagaa tttccgggtc gctctcactc
     1201 gcatcgatat gcgccgcgta ggaatcgaac ctacaaccta gtgattaaga gtcacttgct
     1261 ctgccaattg agctagcggc gcctaccgct cctccgccgt cacctcaccg ccccgccccc
     1321 atagccccaa ggggagtcga acccctctct ggaccttgaa agggtcccgt cctaaccgat
     1381 agacgatggg gccctgctcc ctgccctgct ctatagcgct aacgggattc gaacccgtgt
     1441 ttgggccttg a
//
LOCUS       DASRPQ010002298         1638 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4660797, whole genome shotgun sequence.
ACCESSION   DASRPQ010002298 DASRPQ010000000
VERSION     DASRPQ010002298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4660797"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(172..>1638)
                     /locus_tag="VFD73_26015"
     CDS             complement(172..>1638)
                     /locus_tag="VFD73_26015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77435.1"
                     /translation="GYMYLTHRLEKTSSTGPLPLAVLPFRTFGAGTDSSVLAIGIPDA
                     IISRLATVRQMRLRPTSAVLRYAGRDTDLRRVGRELSVSYVVTGTVQAVADHLRVSVQ
                     LVRAGDGSPVWGSAYDLRRQDLLTLQDSVADKVSTSLSVRLSADEHERLYRRYTANPT
                     AYEWYLRGRSQLAQVTEDGTKSAIQSFERALALDSTYALAQAGLAMASADMHLRFASG
                     PAVEAWGKRATTEASRALALDPDLAEAHLARAAVSRKSDFDWQGTLEESERALALNPN
                     LEIAHYYREAAFYHLGLFDLAEREDREATVVDPANRVEQLRTRGVVDLLQGRYPDAIK
                     NLELARQSSSRAYTDSYLAQAYLYNGDSVRGIAMLDSLRRTTSTPAVNRARAALASFL
                     ARQGKTAEAKALIAAVLGQEGYVDHHVAYSLGAAYAQLHQAEQAAKWLLQASETGFPC
                     YPWFERDPLLDPVRHDLAVTRALAQVKETWQANRRRYS"
BASE COUNT          289 a          535 c          512 g          302 t
ORIGIN      
        1 aacgtgtgcg aggagcaccg cgacctggcc accgccagtc tgatcgaggt ctggatcgac
       61 gagaccgaac ggcgcacctg gttccttttc gaggcggccc ggcggggaga cagctccggt
      121 cactgatcaa ggtgatggaa cccggccagg cggcgagcca agccggcgtc ctcaggagta
      181 gcggcgccgg tttgcctgcc aggtctcctt cacttgagcc agtgctcgag tgaccgcaag
      241 atcatgccgc accggatcga gcaggggatc ccgctcgaac cagggatagc acgggaatcc
      301 ggtctcgctc gcctgtagca gccacttggc tgcctgctcc gcctgatgta gctgggcgta
      361 ggctgctcca aggctgtagg ccacatgatg gtcgacgtag ccctcctgcc ccagcacagc
      421 cgcgatcagc gctttcgcct ccgccgtctt cccctgacgg gcaagaaaac tcgccaacgc
      481 ggcccgggcc cggttgacgg caggagtcga tgtggtgcgt cggagggagt ccagcattgc
      541 aatgccacgg acggaatctc cattgtagag atacgcttgg gcgagatagg agtcggtata
      601 cgctctgctg ctgctttggc gggccagctc gaggttcttg atcgcgtcgg ggtagcggcc
      661 ctggagaagg tccaccacac ctcgggtgcg gagttgctct actcggttcg caggatccac
      721 caccgtcgcc tcccggtcct ctcgctccgc cagatcaaag agtccgagat gatagaacgc
      781 ggcctcacga tagtagtgcg ctatctccag gttggggttc aaggccagcg ctcgctcact
      841 ttcctccagt gtcccttgcc agtcgaagtc cgatttccgg ctgaccgctg ccctggccag
      901 atgggcttcg gcgagatcgg gatccagagc gagtgcgcgg gacgcctcgg tcgtggcccg
      961 ctttccccaa gcctccaccg caggccccga cgcaaaccgc agatgcatat cggcgctggc
     1021 catggcgagc cccgcttggg ccaaggcata ggtcgagtct agcgccaggg cacgctcgaa
     1081 tgattggatc gccgacttgg tgccgtcctc cgtaacctgg gccaactggg accgtcccct
     1141 gaggtaccac tcatacgcgg tcggattcgc ggtgtagcgc cggtacaacc gctcgtgctc
     1201 atcggcgctt agccgaaccg acaagctggt gctcactttg tcagcaaccg agtcctgcag
     1261 cgtgagcaga tcctgccgtc tcaggtcata ggccgagccc cagaccgggg atccgtctcc
     1321 ggcacgtacc agctggacgc ttacccgaag atgatccgcc accgcctgca ctgtacccgt
     1381 gaccacgtag ctgaccgata gttctctgcc tactcgccga agatctgtat cccttccggc
     1441 gtagcgcagc acggcgctcg tgggccggag tctcatctgt cggacggtcg ccaaccggct
     1501 gataatggcg tctgggatcc cgatcgccag aacactggaa tccgttccgg cgccaaaggt
     1561 gcgaaatggc agcaccgcga gcgggagcgg accggtgcta ctggtcttct ccaacctgtg
     1621 ggtcaggtac atgtagcc
//
LOCUS       DASRPQ010002299         1584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3738267, whole genome shotgun sequence.
ACCESSION   DASRPQ010002299 DASRPQ010000000
VERSION     DASRPQ010002299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3738267"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..870)
                     /locus_tag="VFD73_26020"
     CDS             complement(<1..870)
                     /locus_tag="VFD73_26020"
                     /inference="COORDINATES: protein motif:HMM:NF028178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HZI77436.1"
                     /translation="MLLLVAAALVAAVAANFGIARDYGYLRASILTGAAGGHYYTLAK
                     RLAERAKRGHGSLAVIPTAGSIENVSRLTSGQAHCSEMFALIQDGTPVPAGAKLELLG
                     RLPQPESLLLLGRPGNSFQTFAALRGASIGVGPQGSGTAYIMHHLFQDSDLRELGVRM
                     SYHELPEQTRLVAQGKLDLAAVVMQEDADFLHNVIRQDGLDIVSPADLQGLVARYPWL
                     SLGRIPAGRYDLVRSIPAADKQVARLNTLVVANQCTRRADRTALLMLLGAELPGFVRA
                     NPPGSTSSATVVPL"
BASE COUNT          331 a          493 c          487 g          273 t
ORIGIN      
        1 gagcggcact accgttgccg agctcgtaga gcccggagga ttggcgcgca caaagcccgg
       61 caattcagct ccaagcaaca tgagcaatgc agtccggtcg gccctgcgag tgcattggtt
      121 ggcgacaacc agagtattga ggcgcgcaac ttgcttgtcc gccgcgggga ttgagcgaac
      181 caagtcgtaa cgaccagctg gaatgcggcc cagactgagc caggggtagc gcgccaccag
      241 gccctgaagg tctgctgggg agacgatgtc caagccgtcc tggcgaatga cgttgtgtag
      301 aaagtcggcg tcttcctgca tcacgacggc ggcaaggtcg agcttgccct gagccaccag
      361 gcgggtctgt tcgggcaact cgtgatacga cattcggacc ccgagctccc gcagatcgga
      421 gtcttggaag agatgatgca tgatgtaggc cgtgccggaa ccttgtggac cgaccccgat
      481 cgacgccccg cgcaaagccg cgaatgtctg aaaactgttt cccggtctcc ctagcaacag
      541 cagagattct ggttgcggaa gtcggccaag gagctcgagt tttgcaccgg ccggcacggg
      601 cgtaccgtct tggatgaggg caaacatctc actgcagtgc gcctggccac tggtcagccg
      661 gctgacgttc tcgatggagc ccgcggtcgg tatgactgca agcgagccgt gcccccgctt
      721 agcccgctcg gccagtcgtt tggcaagcgt atagtagtga ccgccggccg ccccggtcag
      781 aatcgacgcg cgcaggtagc cgtagtcgcg agcgatgccg aagttggctg ccaccgccgc
      841 caccagtgcg gcagcgacca ggaggagcaa aagacggata aatcccttac cgcgccaggc
      901 tccagggaga gcggtgccta aagcatgcgg cgccgaaata aagggtggtg tcgccgtacg
      961 ataagtcttg ggcaagcgaa gcatgagcac caagacccgg ccctggtcac cccctgccca
     1021 tgagattaca acctaaggct tgcgatgaca acctaggccg ctaaccaaga cgacggcggc
     1081 aatgagaagc acacccaata atgtcatcgg cggggctgag cgtcttgacc agtcctcgct
     1141 gcttgcgatt gccctagcat cgttgctcgc gtgcacgtcc cgatcagggg ccgcagcgct
     1201 ctccgggtaa tgatgatttt ttcaatcctc gcggcgagca gcacaccgcg cgccacgcgg
     1261 tcccgtgatc cactcctgac gccagtcggc gagcgctgct ctctggagcc tgattcgagc
     1321 ctgctgttgc gcgcagttag gcggacatca ccaagctcac ggcgtagtat cagtgcaacg
     1381 ccgcaacctc gctgctgacc caatttgcag gaacctccag ccggcattgg aggccagctt
     1441 gagcaaattc aagatcaact gtcccaccga gttcatatgg aagaagctca cgaatgacgc
     1501 tcgtgccgta gccagaacca ctcgggactg acactggcgg gcccccaatt tcctgccaca
     1561 cgatggccag ccggtcgggc ggcc
//
LOCUS       DASRPQ010002300         1623 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_274756, whole genome shotgun sequence.
ACCESSION   DASRPQ010002300 DASRPQ010000000
VERSION     DASRPQ010002300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_274756"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            677..>1623
                     /locus_tag="VFD73_26025"
     CDS             677..>1623
                     /locus_tag="VFD73_26025"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZI77437.1"
                     /translation="MAAIPGADSVSTRQQRIAELARQAPQMGFTSLNHHLDFTWLLVA
                     YWGTRRDGASGVDGITAADYEADLTANLRSLLERAKSGSYRAPPVRRVHISKGPGTKE
                     TRPIGIPTLEDKVLQRAIVMLLQPIYEQDFKPCSYGFRPGRSAHQALGDLQHQLMKSG
                     SRWVLEVDIRKFFDTLGHAHLRELLKQRVRDGVVLRLIGKWLNAGVMEGGAVTYSSTG
                     SPQGGVISPLLANVYLHYVLDVWWEEAVKPRLAGRASLIRYADDFVIGFTDEADARRV
                     MEVLPKRFGKYGLTIHPDKTRLVPFARPQGRQGRGEPESG"
BASE COUNT          313 a          481 c          565 g          264 t
ORIGIN      
        1 agcggctgca acgaaaacca ggttgcggaa aatacgccta gtgccattcg tcctctcgac
       61 ctcagcgtgc ttgcgccagg ttaagcctgg gaaaggggga aagtgatgta agaagcatcg
      121 aagaaacctt tcggaggagc ccagtgggac agagagccca cccggcagag tctggccaac
      181 agccggaagc gagtcttgcg tcctgtgggg cgacctaccg ggcgaagcgt agacagcgtg
      241 tgtccgagcc ggcccattca gccccgaaat ttggtctgat cgcgggagcc cctgccgtgc
      301 gcgcatgtgg gggccgcgcc tgctctcctg tacgggcctg ggagggcggt cccgccgggg
      361 tctttagaag tcggcgcggg cacctggggg ttccccagga acctgggagg cctgcttgtt
      421 cccgccggct gtttcggcgc ctcgggtcag ccgatcccca aggacccggg ccctgcggtt
      481 gccagggagc cgcatgggag cgaaatcatc gctggcacac ggcggtaggt cctctgcgaa
      541 cccaataagc acgggccgaa gggcaagtag gcgtcggaag gcctcgtagt accgctacgc
      601 caggcgaacg ggccaccccg gcccggagcc tggacaggga agggggcctc tggtcaacga
      661 tccgctggag ggaaacatgg cggctattcc aggagccgat tccgtgtcaa cgcgacaaca
      721 gcggatagcg gagcttgcgc ggcaagcccc gcagatggga ttcacttccc tgaaccacca
      781 cctcgacttc acctggctgc tcgtggccta ctggggcacg cgccgggacg gtgcctccgg
      841 tgtggacggg ataaccgctg cggactacga agcggacctg actgccaatc tgcgttcgct
      901 tctggaacgg gccaaatccg gttcctaccg ggcaccgccg gtgcgacggg tgcatatctc
      961 gaaagggccc gggacgaagg agacccggcc aatcgggata ccgacgctgg aggacaaagt
     1021 tctccagcgg gcgatcgtca tgctgctgca accgatctat gagcaggact tcaagccctg
     1081 ctcgtacggg ttccggccag ggcgatcggc acaccaggcc ctgggagacc tacagcacca
     1141 gctgatgaag agcgggagtc gatgggtctt ggaagtggat atccggaagt tcttcgacac
     1201 tctgggtcat gcccacttgc gggagctgct caagcaaagg gtacgcgacg gggtagtgct
     1261 gcgactgatc ggcaaatggc tgaacgcggg agtgatggag gggggtgcag tgacgtactc
     1321 ctcgaccggc tccccccagg gcggggtgat ctctcctctg ctcgccaatg tctatctgca
     1381 ctatgtgcta gatgtctggt gggaagaagc ggtcaagccg cgcctggcgg gccgagcatc
     1441 cctgatccgt tacgcggacg acttcgtaat cgggttcacc gacgaggcgg acgcacgacg
     1501 agtgatggag gtgctgccga agcgtttcgg caagtacgga ctgacgatcc acccggacaa
     1561 gacgcgactg gtgccgttcg cgcggcccca ggggcggcaa ggacgggggg aaccggagtc
     1621 ggg
//
LOCUS       DASRPQ010002301         1299 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3083675, whole genome shotgun sequence.
ACCESSION   DASRPQ010002301 DASRPQ010000000
VERSION     DASRPQ010002301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3083675"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..257)
                     /locus_tag="VFD73_26030"
     CDS             complement(<1..257)
                     /locus_tag="VFD73_26030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77438.1"
                     /translation="MSAVGAAPRKSRGRWWTRSRETRWGVGLTSIWLVGFLAFAAVPL
                     GMSVYISFTDWAPISGPFWHAHTIGLKNYETFLTDHVYWHSV"
     gene            complement(352..>1299)
                     /locus_tag="VFD73_26035"
     CDS             complement(352..>1299)
                     /locus_tag="VFD73_26035"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HZI77439.1"
                     /translation="GIYWPQCVNEQTYKGHVYGLPRTCSNQSLLFYNKEMFQARGVPF
                     PTNNWTYTDMAQAAQKLSGTYSVAHDQTSQLRFGMAFNTDDFRTEQFMWGWGGDWLNS
                     KFTQCTMTSPAAQKGLQFLHDIAYKYHGMPTSAQASGLPDYFTGFQKERYAMAFMGPW
                     ALDYAFGKKPGGQPQINFDWGAVLTPKGPVSRQAVMASTGLVIAKNSSHKNAAFWLAR
                     FDSQGIGAVVTGAYGVDMPGAKALWSYPSIVKEYGAPLLATIRQSNETGRYPKLVPQY
                     DKFWNVVSTDLQPFWQDQATVQQVTAKACADVTSQGLLH"
BASE COUNT          222 a          423 c          411 g          243 t
ORIGIN      
        1 accgagtgcc agtacacgtg gtcggtgagg aacgtctcgt agttcttgag cccgatcgtg
       61 tgggcatgcc aaaacggtcc ggagatcggc gcccagtcgg tgaagctgat gtagacggac
      121 atcccgagcg gaacagccgc aaatgcgaga aacccgacca gccagataga ggtcaggccg
      181 acgccccagc gtgtctcgcg agaccgcgtc caccagcgtc ccctgctttt ccgcggcgcc
      241 gcgcctactg ccgacatgcg ctacctcctc ccaaacgatc ggccgtgctc acgcgcaatc
      301 gaagtgccga gcgggtgggc tcccggcagg aggcccaccc gctcggaagg actagtgcag
      361 tagcccctga ctcgtgacgt cggcgcaggc ctttgcagtc acctgctgaa ccgtcgcctg
      421 gtcctgccag aagggctgca ggtcggtgct gaccacgttc cagaacttgt cgtactgcgg
      481 caccagcttc gggtaccggc ccgtttcgtt gctctgcctg atcgtggcca ggagcggcgc
      541 gccgtactcc ttcacgatcg acgggtagct ccagagagcc ttcgctcccg gcatgtcgac
      601 accgtaggca ccggtcacga ccgcaccgat gccctgactg tcgaagcgag ccagccagaa
      661 ggccgcgttc ttgtgactgg agttcttggc gatcaccagt ccggtcgagg ccatcacagc
      721 ctggcgagac accggcccct tcggcgtcag aacggcgccc cagtcgaagt tgatctgcgg
      781 ttggccgccc ggcttcttgc cgaaggcata gtcgagcgcc cacggaccca tgaacgccat
      841 ggcatagcgt tccttctgga acccggtgaa gtagtcgggg agcccgctgg cctgcgccga
      901 ggtcggcata ccgtggtact tgtaggcgat gtcgtgcagg aactgcaggc ctttctgagc
      961 cgccgggctg gtcatcgtgc actgggtgaa cttgctgttc agccagtcgc cgccccagcc
     1021 ccacatgaac tgctcggtgc ggaagtcgtc ggtgttgaag gccatgccga accgcaactg
     1081 agaggtctgg tcgtgcgcga cggagtaggt cccggacagc ttttgcgccg cctgcgccat
     1141 gtcggtgtac gtccagttgt tcgtcgggaa gggcacccct ctggcctgga acatctcctt
     1201 gttgtagaag agcaggctct ggttgctgca cgtgcgcggc aggccgtaca catgcccctt
     1261 gtacgtctgt tcgttcacgc actgcggcca gtagatccc
//
LOCUS       DASRPQ010002302         3330 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4333838, whole genome shotgun sequence.
ACCESSION   DASRPQ010002302 DASRPQ010000000
VERSION     DASRPQ010002302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3330
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4333838"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(8..808)
                     /locus_tag="VFD73_26040"
     CDS             complement(8..808)
                     /locus_tag="VFD73_26040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77440.1"
                     /translation="MRVRELSCAALVAAGSLASRSAMAQRTGDQARLIFTVSGGIVVG
                     RHLWSIDKQAVQFIDPADTFALGRRITSNLAVGFSGTYFGGEHLGLGVEGFLVGLGFE
                     DTCRQVFSSGSADVATACRSIQGSTKSATSVFLSAGPVFRINSRSLFSPYARANLGLV
                     FSNQSSIRTIGHFLAPEGQVDLIVYDDNHDSRVEPALGLGGGFTAAIARGYQLRWEAR
                     DNIVGVQKVTSSTTEARVVPPHELEFKHLFSMTIGFDVVLERRRGRRY"
     gene            complement(808..1221)
                     /locus_tag="VFD73_26045"
     CDS             complement(808..1221)
                     /locus_tag="VFD73_26045"
                     /inference="COORDINATES: protein motif:HMM:NF024773.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HZI77441.1"
                     /translation="MADRSRVADLVRSARTIAVVGLSRKPERPSHSVAAYLQRAGYRI
                     IPVHPAGGVTLGEPVYPDLHAAAAANGPIDIVNIFRRSEHIPALLEALLAVRPKLVWM
                     QQGIRNDDVARRLESAGISVVMDRCLAVDHQFLGT"
     gene            complement(1329..1748)
                     /locus_tag="VFD73_26050"
     CDS             complement(1329..1748)
                     /locus_tag="VFD73_26050"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HZI77442.1"
                     /translation="MSTSLTRTVSFHALHRYYRPEWSEDRNREVFGVLADPPGHGHDY
                     RCAATVTGALSEWGTIVDLTLLDRILMEEVVTPLHGKHLNLEVPAFAYGRVLPTCEAL
                     AVYLFPRIAARLPAGVALDRLRIVEDATLYADCTGLD"
     gene            complement(1748..2461)
                     /locus_tag="VFD73_26055"
     CDS             complement(1748..2461)
                     /locus_tag="VFD73_26055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77443.1"
                     /translation="MTVFVLQLLGATLILSSTARAQVGHPPQSSPYRDIRRGHTLTLT
                     GGYFSGDGGDFNIGPHSGAVFGARYDIRTSKTIQLGLGFARGTLQRFIVNPFVQLVNR
                     RTGPVDQSVTFAELNIQMNVTGGKSWNRLAPYVAVTGGLAVAGDTPADTSGFDFGKKL
                     YFAPAVGFRFFLTQRLHLRAEARATFWKLNYPITFQNEPVEQPGTVDNPNAVITGSSL
                     TQWTTSSWLQAGLGYSISP"
     gene            complement(2494..>3330)
                     /gene="gpmI"
                     /locus_tag="VFD73_26060"
     CDS             complement(2494..>3330)
                     /gene="gpmI"
                     /locus_tag="VFD73_26060"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR01307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046537 -
                     2,3-bisphosphoglycerate-independent phosphoglycerate
                     mutase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HZI77444.1"
                     /translation="QPRVHVRNGVPVATMRDGDGVLFFNYRSDRMRQIVAALAVKGFD
                     GFPVRNRPRLSCVTMTQYDQRFEIPQAFPPFSLARILAQVLSDSGRTQFRTAETEKYP
                     HVTYFFNGGYEPPYPGEERCLIPSQKVATYDLAPEMSAVGITDALCRTIESRAHDFLL
                     CNYANADMVGHTGVLPAVIRAVETVDSCLGRVLETAGRAGASVLVTADHGNCEMMIDP
                     ATGGVHTAHTTNPVPLVAVGTASESLRAGGSLRDVAPTVLGLLGIEAPGEMTGRDLRE
                     CD"
BASE COUNT          635 a         1069 c         1049 g          577 t
ORIGIN      
        1 tccgcgttca ataccttctc cctcgcctcc gctccaggac gacgtcgaag ccgatggtca
       61 tgctgaacag gtgcttgaac tccagctcat gcggtggcac cactctggct tcggtagtac
      121 tgctggtgac tttttgcacc ccgacgatat tatcgcgagc ctcccagcgc agctggtacc
      181 ctcgcgcgat ggccgcggta aagcccccgc ccagacccag cgcaggttcc acccgggagt
      241 cgtggttgtc gtcgtacacg atgagatcga cctggccctc cggcgcaagg aagtgcccga
      301 tggtgcggat cgagctctga ttgctgaaga ccagcccgag gttggctcgc gcatagggag
      361 agaataggct ccggctgttg attcggaaga cggggcccgc cgagaggaag accgacgttg
      421 ccgatttagt ggagccttga atcgaccggc acgcagtggc cacatcggcg ctccccgacg
      481 agaacacctg tcggcaggtg tcctcgaacc cgagtcctac cagaaaccct tccaccccga
      541 gtcccagatg ctcgccgcca aagtaggtcc cgctaaatcc gaccgcgaga ttgctggtga
      601 ttcgccggcc gagggcaaac gtgtctgccg gatcgatgaa ctgaactgcc tgcttgtcga
      661 tggaccacag atgtcgaccg acgacgatcc cgccggagac agtaaagatc aggcgagcct
      721 gatctccggt ccgctgggcc atggcgctcc ggctggccag gcttccggcc gcgacgagcg
      781 cggcgcagct gagctctcga acccgcatca ggtccccaag aattggtgat ccaccgccag
      841 gcaccgatcc atcacgacac tgatcccggc ggattccaag cgccgcgcca cgtcgtcgtt
      901 gcgaatgccc tgttgcatcc agaccagctt aggccgcacc gcgagcaaag cctcgagcaa
      961 ggcaggaatg tgctccgagc gccgaaaaat attgacgata tcgatcggac cgttcgcggc
     1021 ggcagcggca tggaggtccg gatagaccgg ctccccaagg gtcacccctc cagccggatg
     1081 taccgggata atgcggtagc cggcgcgctg gaggtatgcc gcgacgctgt gactgggccg
     1141 ctccggtttt cgactcagac cgacgactgc aatcgttcgg gcgcttcgaa ccagatcggc
     1201 tactcgagat cggtcagcca cccgagctca ctgctctccg ccatggccgg gccgaccgtc
     1261 gaggaacgtg gagacggcgc cgcagcccga acccaacaca ggccccctgc ctctccggct
     1321 gcatcaaatc agtcgagccc agtgcagtcg gcatagaggg tggcgtcctc cacaatccgt
     1381 agccggtcca gcgctactcc agcagggagc cgcgcggcga tccggggaaa gaggtacacg
     1441 gcgagagcct cgcacgtggg cagcacccgt ccgtaggcga aggcagggac ctccagattc
     1501 agatgctttc catggagcgg agtgacgacc tcctccatca ggatgcgatc gagcaacgtc
     1561 aggtcgacga tggtgcccca ttcactcaag gcacctgtca ccgttgcagc gcaccgatag
     1621 tcgtgcccgt gtcccggcgg atcggcgagc acgccaaaga cttcgcgatt tcgatcttcg
     1681 ctccattccg gccgatagta ccgatgcagc gcgtggaagc tcaccgttcg ggtcagcgat
     1741 gtgctcatca gggcgaaatc gagtatccca agccggcctg cagccacgag ctcgtggtcc
     1801 attgggtaag gctggagccg gtgatcaccg cgttcggatt atccaccgtt cccggctgct
     1861 ccaccggctc attctgaaat gtgatcggat aattcagctt ccagaaggtg gctctcgcct
     1921 ccgcccgcag gtgcagccgc tgggtgagaa aaaaccggaa cccaacggca ggagcgaaat
     1981 acagcttctt tccgaaatcg aacccgctgg tatccgcggg agtatcgcca gcaacggcca
     2041 gaccccccgt caccgcgacg tagggagcga ggcgattcca gctctttcct ccggtgacgt
     2101 tcatctgaat gttgagctcg gcgaaggtga ccgactggtc caccggtcca gtccgccgat
     2161 tcaccagttg cacgaatgga ttgacgatga accgctggag ggtgccccgg gcgaagccga
     2221 gcccgagttg aatggtcttc gaggtgcgaa tgtcgtagcg cgcgccgaac acggcgccac
     2281 tgtgcgggcc aatgttgaaa tccccgccgt cgccggagaa atagccgccc gtgagggtga
     2341 gcgtgtggcc tcggcggatg tcccgatagg gtgacgactg cggaggatgg cccacctggg
     2401 cgcgagccgt gctgctgagg atgagggtgg cgccgaggag ctgcaaaacg aagacggtca
     2461 tcctgagcgc tcgcgttctc ctgctcccgg ccatcagtcg cactcccgga gatcgcggcc
     2521 ggtcatctcg ccaggagctt cgattccaag gagtccgagc actgtcggcg cgacatctcg
     2581 gagcgagccg ccggcccgaa gcgattccga ggccgttccc accgctacta gtggaaccgg
     2641 attggtggtg tgggcggtgt gaaccccgcc agtcgccgga tcgatcatca tctcgcagtt
     2701 gccgtggtcg gcggtgacga gcacgctggc accagctcga cccgcggtct cgagcacccg
     2761 gcccagacag ctgtcaaccg tctccactgc ccggatgacc gcgggtagca cgccggtgtg
     2821 gccgaccatg tcggcattgg cgtaattgca cagcagaaag tcgtgagctc ggctctcgat
     2881 ggtccggcag agggcgtcgg tgattccaac ggcactcatc tccggcgcca gatcgtaggt
     2941 ggccaccttc tgtgagggga tcaggcagcg ctcttcgccc ggatagggag gctcgtatcc
     3001 accgttgaag aaataggtga cgtgggggta cttctcggtc tctgccgttc gaaactgggt
     3061 ccgcccggag tcactcaata cctgcgccag gattcgagcc aggctgaatg ggggaaacgc
     3121 ctgcgggatc tcgaagcgct gatcgtactg ggtcatggtg acgcaggaca ggcgggggcg
     3181 gttgcgaacc gggaacccgt cgaacccctt caccgccagc gcggccacga tctgccgcat
     3241 gcggtcgctg cgataattga agaacaggac cccgtctcca tcccgcatcg tcgccacggg
     3301 gactccgttt cgtacgtgga cccggggctg
//
LOCUS       DASRPQ010002303         1881 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4029235, whole genome shotgun sequence.
ACCESSION   DASRPQ010002303 DASRPQ010000000
VERSION     DASRPQ010002303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1881
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4029235"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..443
                     /locus_tag="VFD73_26065"
     CDS             <1..443
                     /locus_tag="VFD73_26065"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HZI77445.1"
                     /translation="GPVKLPTGHFTARLDRDRVRDLAAVRSNLQSRRELLVDLRSAGR
                     FSGADPEPRPGVRSGHVPGSRNLPFTELVGPDGTILPEPELRSRLRQQGIDLSQPIIA
                     TCGSGTSACTLVLALELLGFRDVAIYDGAWTEWGSRHDTLIESG"
     gene            459..>1881
                     /locus_tag="VFD73_26070"
     CDS             459..>1881
                     /locus_tag="VFD73_26070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77446.1"
                     /translation="MTTTLESTASPVGSVPQPSALAFGCTAAFVVPFALAGTAAAVIG
                     ARRLLEGNWHDGLLLSLFGVVFGGFALVFWFALWAGRRKLQEESALRARHPEQPWLWR
                     PDWASGSIADTGRATLSTAWVIAVLWNLVAIPSGYLGIRAAFEQNNPAAYIVLMFPAI
                     GAGLLVWAVRATLRYRKYQVSRLELSTIPGVVGHSLSGTVRVNAIIDSPESFVAALSC
                     VRRVTSGSGKSRSTTETILWQDEEPVAGRTSRGAGGWETQVPIAFRVPPDAEPCRLGN
                     PNDQTLWRLTLRASVPGVDYASTFEVPVFRTDATPSPATQSETQLAERESQEILNYHQ
                     PVSSRIRVSRYQQDLVVLFPPARNPGAAAGATLFALLWGAVAWALIHYKAPLVFPVVF
                     GLTELLVIWISLRMWLGVSRVTARPGTLLLASGLGYPYRQRTLPATAIADITVAIGMQ
                     AGAVPYYDLVVRQKDGTKVTAGSS"
BASE COUNT          305 a          606 c          611 g          359 t
ORIGIN      
        1 cgggtccggt caaacttccg actgggcact tcacggcacg gctcgaccgg gaccgggtgc
       61 gcgatctggc tgccgtgcgg tccaatctcc agagtcggcg ggagcttctg gtggacctcc
      121 gctccgcggg ccgattttcc ggggccgacc cggagccccg ccctggcgtg cgctcggggc
      181 acgtgcccgg cagccgaaat cttccattta ccgagctggt cgggcccgac ggcacgatcc
      241 ttcctgagcc tgagctccgg agtcgtttgc gccaacaggg aatagatctt tcgcaaccaa
      301 tcattgctac ctgcggctcc ggtaccagtg cctgcactct ggttctggcc ctggaactgc
      361 tcggcttccg tgacgtagct atctatgacg gcgcctggac ggaatggggc agccggcacg
      421 acaccctgat cgaatcaggc taaacgcgga tctgcttggt gaccacgact ctggaaagca
      481 cggcatcccc ggttggcagt gtgccccaac ccagtgcact tgcattcggg tgcaccgccg
      541 cctttgtcgt gccgttcgcc ttggcgggaa cggccgccgc ggtcatcggc gctcgtcggt
      601 tgctggaagg aaattggcac gacggactgc tcttgagcct cttcggcgtc gtgttcggtg
      661 ggttcgcgct cgtcttctgg tttgccctct gggctgggcg acgaaaactg caggaagagt
      721 cggctctccg tgcccgccat ccggagcaac cctggctgtg gcgccctgac tgggccagcg
      781 gcagcatcgc cgatacgggg cgcgccacgc tctcgacggc atgggtgatc gcggtgctgt
      841 ggaacctggt agcaatcccc tcgggatacc tggggatacg ggcggctttc gagcagaaca
      901 accctgccgc atacatcgtt ctcatgtttc ccgctatcgg tgccgggttg ctggtgtggg
      961 ctgtgcgagc aacgctgcgc tatcgaaagt accaggtgtc tcgactcgag ctctccacca
     1021 ttccaggggt cgtgggtcac tcgctcagcg gcactgtccg ggtcaacgca atcatcgact
     1081 cgcccgagag ctttgtcgcc gcactgagct gtgttcgccg agtgacgagt gggtccggca
     1141 agagcagaag caccaccgaa accatactgt ggcaggacga agagccggtc gccggcagga
     1201 ccagccgggg agcgggtggc tgggaaaccc aggtgccgat agcgttccgg gtcccgcccg
     1261 acgcggagcc ttgccggctg ggcaatccca acgaccagac gctgtggcgg cttactctcc
     1321 gggcgagcgt tccgggagtc gactacgcgt ccaccttcga ggttccggtc tttcgcacgg
     1381 acgccacgcc cagcccggca actcagtcgg aaactcaact ggctgaacgg gaatcgcagg
     1441 agatcctgaa ttaccaccag ccggtcagtt ctcgcatccg ggtcagcagg taccagcagg
     1501 atctcgtggt gctgtttccg cctgcacgaa accctggtgc cgcagctgga gctactctct
     1561 tcgcgctgct ctggggcgcc gtggcctggg cccttatcca ttacaaggcg ccgctcgtgt
     1621 tcccggtcgt gttcggtctg accgaactgc tcgttatctg gatttctctt cgaatgtggc
     1681 tgggagtgag ccgggtaacc gctcggcccg gcacgctgct gctggcgagc ggcctgggat
     1741 acccctacag gcagcgcact ctgccggcga ccgcaatagc cgacataacg gtcgcgatcg
     1801 ggatgcaggc gggggcggtg ccctactacg acctggtcgt ccgacagaaa gacgggacaa
     1861 aagtgaccgc cggcagctcg g
//
LOCUS       DASRPQ010002304         2115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2811866, whole genome shotgun sequence.
ACCESSION   DASRPQ010002304 DASRPQ010000000
VERSION     DASRPQ010002304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2811866"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..959)
                     /locus_tag="VFD73_26075"
     CDS             complement(<1..959)
                     /locus_tag="VFD73_26075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HZI77447.1"
                     /translation="MDDSLYFTEQHHQVREMVRDFSRSHIAPVAAELDRTSTFPWENI
                     KAMGELGLLGVPWSEELGGAGMDQLSYYITIHEMAKVDASHALTISAHTNLGTSPIVE
                     FGTEEQRRRYVPLLASGRVMGGFGLTEPGSGSDAGSTASTAVDKGDHYLLNGSKIFIT
                     HAGVGEIFVVTARTEPGRGNKGITSFIVTKDTVDLDTCRKIGVGHAPDLPKTHGVRAG
                     KKQDKMGWRASDTRELVFEDARVPKENLLGKPGYGFINFLKTLDAGRIGIAALSLGIA
                     EGAYEEALRYAGVRKQFGRPIGSFQAVSFQLADMALEIEAGTHL"
     gene            complement(969..>2115)
                     /locus_tag="VFD73_26080"
     CDS             complement(969..>2115)
                     /locus_tag="VFD73_26080"
                     /inference="COORDINATES: protein motif:HMM:NF012493.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HRDC domain-containing protein"
                     /protein_id="HZI77448.1"
                     /translation="WIASALARAGHRAVPYHAGLSKLRRRAALEEFLQDRMDVIVATC
                     AFGMGIDKPNVRLVVHWAPPPTPEAYYQEAGRAGRDGEFARCVLLWKPEDVVLHRRQL
                     DVTFPAPELLERVWSRSGGSLGVPANVLQSAERLRRELRPERGPVDWRPVAHRRRQAE
                     LRIRAVSEYAATTACRRARLVAYFGEKLAHCSGCDHCSAHCDLPRMDKAISKRVAQLR
                     RALVSSKAPWGGCPLEPEVLLQLARHPPASAAALAEVPGVGPALAERLGGRILNALSP
                     LPASEAFPAEPLVSALQVWRGGVARDMGVPPYVVMPDSLLGSVANHRPTTRAELARIP
                     GLGPRALAKFGEDLIRLVQTSSPRELQPEPERDRSGGATVGSAQSPR"
BASE COUNT          357 a          704 c          671 g          383 t
ORIGIN      
        1 aggtgggttc cagcctcgat ctcgagtgcc atgtccgcca gctgaaaact cactgcctgg
       61 aagcttccga tggggcggcc aaactgcttt ctcactcccg cgtagcggag cgcctcctcg
      121 taggcgccct cggcgatgcc cagcgacagc gccgcgatcc cgatgcggcc ggcgtccagc
      181 gtcttgagaa agttgatgaa tccgtagccc ggctttccca agagattttc cttgggtact
      241 ctggcatcct cgaagaccag ctcacgggtg tcgctggcgc gccagcccat tttgtcctgc
      301 ttcttgcccg ccctgacccc gtgtgtcttg ggtaggtccg gcgcgtgccc caccccgatc
      361 ttgcggcagg tgtcgaggtc gactgtgtcc ttggtaacga tgaagctggt gatccctttg
      421 ttgccccgcc cgggctcggt tcgcgccgtc accacgaaga tctcccccac cccggcatgg
      481 gtgatgaaga tcttggatcc gttcagcagg tagtgatcgc ccttgtccac agcggtgctc
      541 gcggtgctgc cggcatcgct gccggacccg ggctcagtca acccaaagcc tcccatcact
      601 cggccggagg cgagcaacgg cacatagcgg cgccgctgtt cttcggttcc gaactcgacg
      661 atgggcgagg tgccgaggtt ggtatgggcg ctgatggtca gcgcgtgact cgcgtctacc
      721 ttggccatct cgtggatggt gatgtagtac gagagctgat ccattccggc tcccccaagc
      781 tcctcgctcc agggcacccc cagcaggcca agttcaccca tcgccttgat gttttcccaa
      841 gggaaggtgg aggtccggtc cagctcggct gcgaccggcg cgatgtggga gcgggagaag
      901 tcgcgcacca tctcccgtac ctgatggtgc tgttcggtga agtaaaggga gtcgtccatg
      961 cagccaagct aacgcggcga ttgagccgat ccaacagtcg caccgcctga gcggtctctt
     1021 tcgggctccg gctgaagctc tctgggcgag ctcgtctgga cgagacggat caggtcttct
     1081 ccaaacttgg cgagtgcccg cgggcccaac cccggtatgc gcgccagctc ggcccgagtt
     1141 gtgggccgat ggtttgcgac cgagccaagg agtgaatccg gcatgacgac gtagggaggc
     1201 acgcccatgt ccctggcgac accgccccgc cacacctgca gcgccgagac gagcggctca
     1261 gccggaaagg cctcggacgc tggaagcgga ctcagcgcat tcaggatcct gccgccgagt
     1321 cgttcggcta aagcaggacc gacaccgggc acttccgcca gggcagccgc gctagccggc
     1381 ggatgtcgcg cgagctgaag cagcacctca ggctcgagtg gacatcctcc ccacggagcc
     1441 ttgctgctga ccagcgcacg ccgtagctga gcgacgcgtt tcgagattgc cttatccatt
     1501 ctgggcagat cacagtgcgc cgagcagtgg tcgcaccccg agcagtgagc gagcttttcg
     1561 ccaaaataag ccacgaggcg agcgcgccgg cacgccgtcg tggcggcgta ctcactgacc
     1621 gctcgaattc tcagctcggc ctgccgccgc cgatgcgcaa ccggtctcca gtcgacgggc
     1681 cctcgttcgg gccgaagttc gcggcggaga cgctccgcgg actgaaggac gtttgctgga
     1741 accccgaggg atccgccgga gcgggaccac acacgctcca gtagctcggg tgcagggaag
     1801 gtcacgtcca gctgccgacg atgcagcacg acatcttcgg gtttccacag gagcacacag
     1861 cgcgcgaact caccgtctct acctgcccgc cctgcctcct gatagtaggc ctcgggggtt
     1921 ggtggcggtg cccaatgcac caccagccgg acattaggtt tgtcgattcc cattccgaag
     1981 gcgcaggtag cgacgatgac gtccatgcga tcctggagaa actcttccag cgctgcgcgc
     2041 cgccggagct tgctcagccc cgcatggtac ggtacggctc ggtggccggc ccgggcgagg
     2101 gcgctggcga tccac
//
LOCUS       DASRPQ010002305         1004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2454432, whole genome shotgun sequence.
ACCESSION   DASRPQ010002305 DASRPQ010000000
VERSION     DASRPQ010002305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2454432"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(418..1004)
                     /locus_tag="VFD73_26085"
                     /pseudo
     CDS             complement(418..1004)
                     /locus_tag="VFD73_26085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611653.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
BASE COUNT          172 a          305 c          354 g          173 t
ORIGIN      
        1 cgaccagccc caagcccgcc ggattggggc tgagtgtcca acgtggatcg caagtcctca
       61 ccacctcgct ggtcttgagc gccccagcgg cgctattcgc ggcgctcagc tacaaaagag
      121 gtccggtcgg atcgctcgcg aacgagccga cagccgcagg gccctgtgaa gttcgggacc
      181 taagcaggtt tgcaggacct gccccacgga tgctgcccag cctcgcccga ctgggcagaa
      241 gggtgggaag cactccatcc gtggggcgct caacaaaggt ctgcttaggg gcgtggatgc
      301 ctaactgtct ggatgcgaga cgtccttggc gcgcgtgatg acctgaaggg ccttgggcag
      361 gctgcaggga tcgaagggcg gatcgtggtt ggggttggtg cgagcgggca gcgcgcccag
      421 gcgttcatgc acgaccgtct cgggtgatcg tccgcccaga acacgctggc gtcgggcgtt
      481 gtaggcctga ttgaagccgc gcagcagggt gtccagatca cggtggctgg cgatggtgat
      541 gcccagcacc tcgcgctgta cccgcccatt gaagcgctcc accatgccat tggtgcgcgg
      601 cgtatagggc cgcgtcttac ggtgggtcac cccaagcttc cggcacgccc gctcgaagcc
      661 gtcagccgtg aagcaggagc cgcggtcggt cagcacatgg gtgacctgga acggaaaggc
      721 ccggacagcc tccgtcagga aggcgacggc gctgcgctcg gtttcgtcgt ccttgaccgc
      781 gaggtgcacg aaccgggagg cccggtcgat ggccacatag aggtaacgct tgcggctctc
      841 gccattgctg gtgcgaagct tgggcaagtg cttcacgtcc atgtgcacga agccgagatc
      901 gtagtctttg aagcggctgt gcgatcggcg ggcgcaatta gccggcggca ggcggcccag
      961 gccctcggct ttcaggatgc ggtagaccgc gtcacggttg agat
//
LOCUS       DASRPQ010002306         1020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1861691, whole genome shotgun sequence.
ACCESSION   DASRPQ010002306 DASRPQ010000000
VERSION     DASRPQ010002306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1861691"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(62..631)
                     /locus_tag="VFD73_26090"
     CDS             complement(62..631)
                     /locus_tag="VFD73_26090"
                     /inference="COORDINATES: protein motif:HMM:NF020918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HZI77449.1"
                     /translation="MPAPETARNATDEAARTARTVTDEAARVGEQTARAGADMARRGT
                     ETARDTFQSGLNTANETFQRLSDQVTRVLGFNGPQAEELARRSSQNLQAVSQASSVLA
                     RGAQEVSREVIQLVQDRLEKNVEALNRLAGTCSVQDFVAVQSDLARDGLQQVIDTNKR
                     IAEVSVRVADEAARAIQAQDNAHQGRRAA"
BASE COUNT          170 a          304 c          353 g          193 t
ORIGIN      
        1 ctccagacaa aaaggcccgg cactgggccg ggccttgtgt ttcgtgccga gagcgtcagg
       61 gttaagcggc gcggcgaccc tgatgggcgt tgtcctgagc ctggatggcc cgcgcggctt
      121 catcggccac ccgcaccgac acctcggcga tgcgcttgtt ggtgtcgatc acctgttgca
      181 ggccgtcgcg cgccagatcg ctctggaccg ccacgaagtc ctgcaccgag caggtgcccg
      241 caagccggtt cagggcctcg acgttcttct ctaggcggtc ttgaacgagc tggatcacct
      301 cgcgcgagac ctcctgagcg ccgcgcgcca gcaccgagct ggcctgcgag acagcctgga
      361 ggttctggga cgagcggcgg gccagctctt cggcctgcgg gccgttgaag cccagcactc
      421 gggtgacttg atccgacagg cgctggaacg tctcgttggc cgtgttcagg cccgactgga
      481 aggtgtcgcg agcggtttcg gtcccccggc gcgccatgtc agcgccagca cgagcagtct
      541 gctcgcccac gcgagcggcc tcatccgtga cggtgcgggc cgtgcgggcg gcctcgtccg
      601 ttgcattgcg ggcagtttcg ggtgcgggca taagatcctc ttcatccaga gtagatgttt
      661 tcatcgacag cgcagcaact cgggatacgc acacgcagag aaggcgcacc tgttccaggt
      721 aaggcgcgct cctgcgctgt gaatgaggtg gctcaacggc ttgagtgacc cgaagtttca
      781 gcgagagcgt tgtttatcct gcatgcgagg gtgtggagac atgcgggcgg ggcattaaca
      841 actgtgcgtt ttcgtggacg cgtcctgatc ctctctgatc ggaggatgga taccgctgtg
      901 gccagagctg tgttggtcca acagaaaggg cggccgaagc cgcccgaagt tgtgggtgga
      961 aataggagaa ccccatgtgg tggggccgag gttaacgcgg tccgagccag aatggttcga
//
LOCUS       DASRPQ010002307         1121 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_894367, whole genome shotgun sequence.
ACCESSION   DASRPQ010002307 DASRPQ010000000
VERSION     DASRPQ010002307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_894367"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..>1121)
                     /locus_tag="VFD73_26095"
     CDS             complement(149..>1121)
                     /locus_tag="VFD73_26095"
                     /inference="COORDINATES: protein motif:HMM:NF025016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome b N-terminal domain-containing
                     protein"
                     /protein_id="HZI77450.1"
                     /translation="HLLSGMGLAIAYSVAFSIPLIGAQLGYLVWDGPFPGSSSFLPRL
                     EIIHVLLLPAALAVLITIHLAMIMRQHHSQFPGPGRRERNVVGTPMWPAYALRSVGLL
                     LAVSAVLFLIGGLIQINPIWQWGPYHPFLSENGAQPDWYIGWLIGALRLMPNLEPAIG
                     SHTIIPNPFWGGALFPLVVFAVMFAWPSIERKFTGDHRRHDLLDRPRDRPIRTAIGAA
                     FLSWVVIIFAVGSTDRLFFRLHISYDAQIHFWRIGVWVLPIIIFFITRSACRSLQRSG
                     SHPLRAWQGVMVQRGSGGEVDVLADSPDRIEAPRSEPPVGTLPGDPE"
BASE COUNT          229 a          363 c          377 g          152 t
ORIGIN      
        1 gaggagcgca agggcgaggc caaggatgag cttgcgcgcg accaggagcg ggccgacgca
       61 aaggcccagg aagtcgccaa tctggagcgc aagacctcgt agccaggact ccttcagccg
      121 ggctggtcgc gctggccggc ccggctcctc actccgggtc ccccgggagc gtgccgacgg
      181 gcggctctga ccgcggcgcc tcgatgcggt cgggactgtc agctagcaca tccacctcac
      241 cgccagatcc gcgctggacc atcactccct gccaggcccg caacgggtgc gatccactgc
      301 gctgaagcga cctgcaggcg ctgcgcgtga tgaagaagat gatgatcggc aatacccaca
      361 cgccgattcg ccagaagtgg atctgtgcgt cataggagat atgcaggcgg aagaacagcc
      421 ggtcggtcga cccgacggcg aagatgatca ccacccagct caggaaagcg gctccgattg
      481 cggtgcggat cgggcggtca cgggggcggt cgagcaggtc gtgacggcga tggtcaccgg
      541 tgaacttgcg ttcgatcgac ggccaggcga acatcaccgc gaacaccacg agcgggaaca
      601 gcgcgcctcc ccagaagggg ttggggatga tcgtgtggct gccgatcgcc ggctcgagat
      661 tcggcattag acgcagcgcc ccgatcagcc agccgatata ccagtccggc tgcgctccgt
      721 tctccgacag aaatgggtga tacgggcccc actgccagat cgggttgatc tggatcagcc
      781 cgccgatcaa gaacaggacc gcgctcaccg ccagcagcag accgaccgag cgaagtgcgt
      841 aggcgggcca catcggagtt cccaccacgt tgcgctcgcg cctccccggc cccggaaatt
      901 gcgaatggtg ctggcgcatg atcatcgcca ggtgaatcgt gatcagcacg gcgagcgcgg
      961 ccgggagcag cagcacatgg atgatctcca ggcgcgggag gaagctgctc gagcccggga
     1021 acgggccgtc ccacaccagg tagccgagct gggctccgat caacgggatc gaaaacgcca
     1081 ccgaataggc gattgccaac cccatgcccg acagcaggtg g
//
LOCUS       DASRPQ010002308         3212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2175392, whole genome shotgun sequence.
ACCESSION   DASRPQ010002308 DASRPQ010000000
VERSION     DASRPQ010002308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3212
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2175392"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..108)
                     /locus_tag="VFD73_26100"
     CDS             complement(<1..108)
                     /locus_tag="VFD73_26100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011551594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF520 family protein"
                     /protein_id="HZI77451.1"
                     /translation="MASNASFDVSTGADLQEVDNAVNQALKEIAQRYDFK"
     gene            535..1884
                     /locus_tag="VFD73_26105"
     CDS             535..1884
                     /locus_tag="VFD73_26105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase"
                     /protein_id="HZI77452.1"
                     /translation="MAYQPETVAVHAGQVVDPATNARAVPIYSTTSYVFNDTQHAADL
                     FGLRVFGNIYTRIMNPTSDVFEKRIAELEGGVAALAVASGQAATSLTILNLAKAGDNI
                     VSSQTLYGGTYNLFAYTLPKWGIATTFVDIHNLDAVRAAINDGTRLLFVETIGNPRLD
                     VPNFEALADIAHSAGIPLVVDNTFGAAGLLSRPIDYGADIIVHSATKWIGGHGTAIGG
                     VVVDAGHFDWANDSSRKRFPEFSQPDPSYHGLVYTDAFGPAAFIIKLRVQLLRDLGPA
                     LSPFNSFLFLQGLETLPLRIHRHSENALAVAQWLAQDSRVEWVSYPGLETHPEHKNAV
                     KYLKGGFGGVLTFGVKGGHAVARGLIDRVKLFSLLANVGDAKSLIIHPASTTHEQLSP
                     EQQLATGVTPELVRLSLGIEDVRDLIADLDQALGTPEASARELNTATRAGQTAAAAR"
     gene            1917..2432
                     /locus_tag="VFD73_26110"
     CDS             1917..2432
                     /locus_tag="VFD73_26110"
                     /inference="COORDINATES: protein motif:HMM:NF012696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HZI77453.1"
                     /translation="MSAIDALLQANAGYARTFDLGDLPTPPRLKLAIVTCMDSRILPS
                     RAFGLEEGDAHIIRNSGGRTQDALRSLIISQRLLGTNEIAVIHHTECGSLMFSNGDLR
                     RKVKEDLGADTGEIDFLPFRDLQESVREDVSFLLSSPLISPTTIVRGFIYDVHSGRLN
                     EVKFEPAGVRQ"
     gene            2429..>3212
                     /locus_tag="VFD73_26115"
     CDS             2429..>3212
                     /locus_tag="VFD73_26115"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HZI77454.1"
                     /translation="MTLTVTADGTTGDLDLGDFVTDRGEETRGLHLRYRILGNAEAAE
                     ANGWILAFHSLTGSADVESWWGPLVGPGRPLDTERHAILSANLLGSCYGSSSPREWWE
                     QFGRPFPELTPGDLARVHVPLLEYLGIHRVALATGGSLGGMVALHWGRVSNVPTDRLV
                     VFAAPAATSPQSIGWNAVQRMAIEADPAWNGGYYPADRPPRSGLAAARALAMITYRSA
                     AEFQVRFGRQSSRVKDQFDVESYLRRQGEKLVARFDPASYVQL"
BASE COUNT          596 a         1010 c          984 g          622 t
ORIGIN      
        1 tttgaagtca tagcgctgag caatctcttt cagcgcctgg ttcacggcgt tatcgacttc
       61 ttgcaggtcg gcgccggtcg atacatcgaa ggaggcgtta ctggccatag aacagggatt
      121 gctgtcgaga tggatatcag gcgaatgccg gaagaatgac ctgtgtcagc aggcgcggca
      181 agctgtcggc tgcttgacag catcgccgga tttagtatag tggagccgtc ggcggtggat
      241 ttatggccac ttgctcccgc cgggtgctcc agcaccgaac caaagagcta aagcgccgga
      301 aacagccctc cgcgctctat tggcccgggg ggctttgtgc tccccccaca ttcatccagg
      361 attgtctgat gcattccgag ctcatgtgtc gccgaattct ctgtatgggt cacccgatca
      421 gcgggtggac ggcgcattcg gaattggaga gatgaggtag cactctcccg acagacaatc
      481 cgaggcccgg ccccccaaga gccgggcctt cacttttctg cgaggagcac gaccatggcg
      541 taccagcccg aaacggtagc agtccacgcc ggccaggtag tcgatccggc gaccaatgcg
      601 cgtgcggtgc cgatctactc gaccaccagc tacgtcttca acgacaccca gcatgcggcc
      661 gacttgttcg gcctccgggt gttcggcaac atctacaccc ggatcatgaa tcccacgagc
      721 gacgtgttcg agaagcggat tgctgagctc gagggaggtg tggcggcgct cgcggtagcc
      781 agcgggcagg ctgccaccag cctgaccatt ctgaatctgg cgaaggccgg cgacaacatc
      841 gtctcgtccc agaccctcta cggtggcacg tacaatctct tcgcgtacac cctccccaag
      901 tggggtatcg cgacgacgtt cgtggacatc cacaatctcg atgccgtccg tgccgccatc
      961 aacgacggta ctcgtctgct cttcgtcgag acgatcggca acccccggct cgatgtcccg
     1021 aacttcgaag cgctggccga tatcgcccac tcggccggta taccgctcgt cgtcgacaat
     1081 acgtttggtg ctgccggcct cctcagccgg ccgatcgact acggggcgga tatcatcgtc
     1141 cattcggcaa ccaagtggat cggcgggcac ggcaccgcga tcggcggcgt cgtggtggac
     1201 gcagggcact ttgattgggc aaacgacagt tcgcgcaagc ggtttcctga attcagccag
     1261 cctgatccct cctatcacgg cctggtctac accgacgcgt ttggcccggc ggccttcatc
     1321 atcaagctcc gggtccagtt gctgcgcgac cttggtcccg cgctttcgcc gttcaactct
     1381 ttcctcttcc ttcagggatt ggagacgcta ccgctccgga ttcaccggca ctccgagaat
     1441 gccctggcgg ttgcccaatg gttggcgcag gattccaggg tggagtgggt ctcctacccc
     1501 ggtttggaga cgcaccccga gcacaagaat gcggtgaagt atctcaaggg cgggttcggc
     1561 ggcgtgctca cctttggcgt caagggcgga catgcggtgg cccgcggctt gatcgatcga
     1621 gtaaaactgt tctcgctgct ggccaacgta ggcgatgcca agtcgctcat cattcacccg
     1681 gcgtcgacca ctcacgagca gctgagcccg gagcagcagc tggccaccgg cgtgaccccg
     1741 gagctggtac gcctatcgct cgggatcgag gacgtgcgcg atctgatcgc ggatctcgac
     1801 caggcgctgg gaacaccgga agcatcagcc cgggaactga acaccgcgac gcgagcgggg
     1861 cagaccgcgg ccgctgcacg ctgagtactg gaccaatcca ctccatggag gtgtcgatgt
     1921 cggccataga tgcactgctt caagccaacg ccgggtacgc caggacattc gatctgggtg
     1981 atctgccgac tccgccacgg ctcaagctcg ccatcgtcac ctgcatggat tcccggatcc
     2041 tcccgtcccg tgcgttcggt ctcgaggagg gagacgcaca tatcatccgg aactccgggg
     2101 gccgaaccca ggacgcactc cgctcgctga tcatctctca gcggcttctc gggaccaatg
     2161 agatcgcggt gatccatcat acggaatgcg gcagtctcat gttctctaat ggcgatcttc
     2221 gcaggaaggt gaaggaagac ctcggcgccg ataccggcga gatcgacttt ctcccgtttc
     2281 gtgatctgca ggagagcgtc cgcgaagatg tgagttttct gctgtcctcc cccttgattt
     2341 caccaacaac gatcgtgcgc ggattcattt acgacgtgca cagcggccgg ctcaacgagg
     2401 tcaaattcga gccggccgga gtacgccagt gacgctgacc gttactgctg atggcactac
     2461 cggagacctc gacctcggag actttgtcac cgatcgagga gaggagaccc gcggccttca
     2521 tcttcggtat cggattctcg gcaacgccga agcggccgaa gcgaatggat ggatcctggc
     2581 gtttcattcg ttgaccggga gcgccgacgt ggagagctgg tggggtcccc tggtcggtcc
     2641 cggccggccg ctggacactg agaggcacgc tatcctctcg gcgaatctcc taggcagctg
     2701 ctatggctcg agcagcccaa gggagtggtg ggagcagttc ggcagaccgt ttcccgagct
     2761 cacccccggc gatctggccc gggttcacgt accactgctg gaataccttg ggatccaccg
     2821 cgtcgccctg gccactggcg gatcactggg cggaatggtc gcgctgcact gggggcgtgt
     2881 cagcaacgtt ccgaccgacc ggctcgttgt gtttgccgcc ccagcggcga catcgccgca
     2941 gtcgatcggt tggaatgcgg tgcaacggat ggccatcgaa gcagatccag cgtggaacgg
     3001 cggatactat cccgccgacc gcccgccgcg ctcaggtctc gcggcagccc gtgcgcttgc
     3061 gatgatcact tatcgctccg ccgctgaatt tcaggtgcga ttcggccgac agagcagccg
     3121 ggtaaaggat cagttcgacg tggagtccta tctcagacga cagggagaga agctggtggc
     3181 ccggttcgac ccggccagct acgtccagct ga
//
LOCUS       DASRPQ010002309         1149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3438632, whole genome shotgun sequence.
ACCESSION   DASRPQ010002309 DASRPQ010000000
VERSION     DASRPQ010002309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3438632"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..417
                     /locus_tag="VFD73_26120"
     CDS             <1..417
                     /locus_tag="VFD73_26120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77455.1"
                     /translation="SSMGIGHSLDADQIPDRATWEALTQRISRRVDCGPDFFVEIERG
                     FLEPDQPLTNCALVGFSNLQIMPDGRAFRCGLLADQAELASLVMAQGELRRTQPDPGE
                     EELLMKAAKAPLCDGCPVTEGRRACIYDKVSSLAIT"
     gene            502..>1149
                     /locus_tag="VFD73_26125"
     CDS             502..>1149
                     /locus_tag="VFD73_26125"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HZI77456.1"
                     /translation="MGSRGLVIFDAFDTLVTSRRDSRGTFLEGLERAGVRGADPVLAA
                     LQAASEGLDHSVWSGSRQAYVGWTSAVLRELSTVGLRVNSNLARCVVPALEQLHQAPM
                     VALRGARSCLKQLKAAGFTIAVCSNWGWDLAADIADTGLLEYVDYPVSSAQVGWRKPD
                     PRIYWSVLALAGCAPKDAVFVGDSLRTDVLGPQRAGIRSFLRAPATGGDVRGEAIS"
BASE COUNT          172 a          364 c          398 g          215 t
ORIGIN      
        1 tccagcatgg ggatcggcca ttcgctcgat gctgaccaga tacccgaccg ggccacctgg
       61 gaggcgctga cccagcgcat atcgcggcgg gtggattgcg gtccggattt ctttgtggag
      121 atcgagcgcg gcttcctgga acctgatcag ccgctgacga actgtgccct ggtggggttc
      181 tccaacctgc agatcatgcc tgatggccgc gcattccggt gcgggctgct ggccgatcag
      241 gccgaactgg cctcgctggt aatggcccag ggcgagctcc ggcgcacgca gccagatcct
      301 ggtgaggaag agctgctcat gaaggccgcc aaggcgccgc tctgcgacgg ctgcccggtc
      361 acggaggggc gccgggcctg catctacgac aaggtcagct ctctggcgat cacctaaacc
      421 aggaaaactg ctccggatct gcccggaatc ccggcttaac gacgtactgt tgctgctttg
      481 gcgctgagcc ggggtggtgg catgggctca cgggggctgg tcatctttga cgccttcgac
      541 accctggtga cgtcgcggcg ggacagcaga gggacatttc tcgagggcct tgagcgggcc
      601 ggcgtccgcg gcgctgatcc ggttctagct gccctccagg ccgccagcga gggcctggac
      661 cattccgtct ggtcgggatc gcgccaggcc tatgtcgggt ggacatcggc ggttctgcgg
      721 gaactgagca cggtcggatt gcgggtcaat agcaatctgg cccgctgtgt tgtgcctgcg
      781 ctcgagcaac tccatcaggc gccaatggtg gcgctccgcg gcgcgcggtc ctgcctgaaa
      841 cagctcaagg ccgctggatt caccatcgcg gtgtgctcga actggggctg ggacctggcc
      901 gccgacatcg ccgataccgg cctgcttgaa tacgtcgact atcccgtgtc gtccgcccag
      961 gtgggctggc ggaaaccgga tccgcgcatc tactggtcgg tcctggccct ggccgggtgc
     1021 gcgcccaaag atgctgtatt cgtgggcgac agcctgcgga ccgatgtcct tgggccgcag
     1081 cgcgctggta tccggtcatt tctgcgggct cccgccaccg gtggtgacgt ccgcggcgag
     1141 gcgatcagc
//
LOCUS       DASRPQ010002310         3095 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4334751, whole genome shotgun sequence.
ACCESSION   DASRPQ010002310 DASRPQ010000000
VERSION     DASRPQ010002310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3095
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4334751"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..325)
                     /locus_tag="VFD73_26130"
     CDS             complement(<1..325)
                     /locus_tag="VFD73_26130"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HZI77457.1"
                     /translation="MENASTPAPLNPAATEGAWMAQDTPPGSPSQQTHVDTSRAPRVS
                     PVEYEGWRQYSVQCARCHGQDVLPNPVAANLLTSLAPGGPIDTPQKFTQVVTEGRTHR
                     GMPAFR"
     gene            complement(417..1253)
                     /locus_tag="VFD73_26135"
     CDS             complement(417..1253)
                     /locus_tag="VFD73_26135"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HZI77458.1"
                     /translation="MSGGRRSFRSGAVRQGLYGMFAGAFLLALGTGCGKERRSGAVSS
                     DSTAMAPDTGRAAASDTSRSAVDTAATATTDSARDTAKTSAPAGARPDTTRTTATKSV
                     HRTPTTRPTSPRTKPTAKPARDTSGAAASASGAQAGTSNTSHASGAQAGDSSAAAEQT
                     TANAPLRDPYHHAPLDTVSQQVYDGWKQFNLNCARCHGEDAQGTTIAPHLIVSLKPDG
                     PINTKEIFMQTVCAGRPAKGMPSWCALGMEMSTIEAIYSYVKGRSDAKIHPGRPAVKA
                     GG"
     gene            1394..2284
                     /locus_tag="VFD73_26140"
     CDS             1394..2284
                     /locus_tag="VFD73_26140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase"
                     /protein_id="HZI77459.1"
                     /translation="MSSPEGKIVTLGLVQMRCTPDPAHNMGAAIEGIRTAAERGAQIV
                     CLQELFRSQYFCQTEDHRCFDLAEPVPGPSTEELGAIAGELGVVVIASLFERRAQGLY
                     HNTAAILDADGRYLGKYRKMHIPDDPQYYEKFYFTPGDLGFRSWDTRYARIGVLVCWD
                     QWYPEAARLTALSGAQILFYPTAIGWLPGEKEQHGAQQHAAWETIQRSHAIANGVYVC
                     SVNRVGHEGDPQGGLEFWGGSFVSDPGGRLVVKGGTDEEVLIAPCDLAKVDASRTHWP
                     FLRDRRIDAYSDLTKRYLDD"
     gene            2411..>3095
                     /locus_tag="VFD73_26145"
     CDS             2411..>3095
                     /locus_tag="VFD73_26145"
                     /inference="COORDINATES: protein motif:HMM:NF016274.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HZI77460.1"
                     /translation="MPAEWEPHRGTWLSWPHKEASWPGKFRLVPPVFARMVTLLADHE
                     EVHINVAGPAMEGEVRRLLADAGSDTRNVFFHYHPTNDAWCRDHGPIFVQGGNRLANS
                     QAIVDWGFNAWGGKYPPYDLDDVIPTRIAEELGLPVYHPGIVLEGGSIDVNGRGTLIT
                     TEACLLNPNRNPSLTRSEIEAYLEKYLGVSRILWLGDGIVGDDTDGHVDDLTRFVDPT
                     TVVTVVESNP"
BASE COUNT          540 a          956 c          980 g          619 t
ORIGIN      
        1 cgcgaaaggc tggcatgccc cgatgagtcc gcccctcggt gaccacttgc gtgaacttct
       61 gcggagtatc gatcggaccg ccaggggcca gtgaggtcag aagattggca gcgaccggat
      121 tgggcaacac gtcctgtcca tgacaccgcg cgcactgcac gctgtattga cgccaccctt
      181 cgtactctac cggactgact cggggggccc tactcgtatc cacgtgggtc tgctgggacg
      241 ggctgccggg cggagtgtcc tgagccatcc aggcgccttc ggtggctgcg ggattcagcg
      301 gagcgggtgt cgaggcgttt tccaccgata cactccagct tgcccctatc gcgaaggcga
      361 tcgaagctcc agccacactc cgtagaatca gcaccagttt gcgcctggcg taggcattag
      421 cctccggcct tcaccgccgg gcggccgggg tgaatcttgg catcgctgcg acctttcacg
      481 taggagtaga tcgcctcgat ggtggacatc tccatgccca gtgcgcacca ggacggcatc
      541 cctttggcgg ggcggccggc acacaccgtt tgcatgaaga tctccttggt attgatgggt
      601 ccatcgggtt tgagcgagac gatcaaatgc ggcgcgatcg tggtaccctg cgcgtcctct
      661 ccatggcagc gggcgcaatt caggttgaat tgcttccacc cgtcgtacac ctgttgcgac
      721 actgtgtcca gcggagcgtg atggtagggg tcgcggagcg gagcgtttgc ggttgtctgt
      781 tcggccgctg ccgaagaatc gccggcctgg gcaccggagg cgtgcgacgt attagatgtt
      841 cctgcttggg ctccgctggc cgaggcggcc gctcccgagg tgtcacgagc tggttttgct
      901 gtcggtttgg tccggggcga ggtgggtcga gtggttggtg tacggtgcac cgacttggtt
      961 gcggtggttc tcgtcgtatc aggtcgggcc ccggctggcg ccgaggtctt cgcagtatca
     1021 cgggctgagt cggtcgtggc cgtcgctgca gtgtccacag cgctcctcga ggtgtcactc
     1081 gccgcggctc taccggtatc tggagccatt gcagtgctgt ccgacgagac ggcacccgac
     1141 cgccgctctt tcccgcagcc ggtccccagc gcgaggagaa aagcgccggc aaacattccg
     1201 tagagtccct gccggactgc gccggaccgg aaacttcggc gaccaccgct catatccgct
     1261 gatcctccgc taaaggctgc gactcgaccg cacaccgggg ggaaacattg tacgatccaa
     1321 gagaatgcta ggtgacgcag gtcacttgcc cccatcggct gactccgccc tgcccccgga
     1381 ttattatcat cgcatgtcga gccccgaagg caagatcgtc acgttgggcc tggtgcagat
     1441 gcgctgcacg cctgatcccg ctcacaacat gggagcggcc atcgagggca tacggaccgc
     1501 cgctgagcgc ggggcgcaaa ttgtctgcct ccaggagctg tttcgcagcc agtatttctg
     1561 tcagaccgaa gatcatcgct gcttcgattt ggcggagccg gtccccggac cctcaaccga
     1621 agagctcggc gcgatcgcag gagagctcgg cgttgtggtc attgcttcgc tgttcgagcg
     1681 ccgcgcccag ggcctatatc acaacaccgc cgcgattctg gatgccgatg gccggtactt
     1741 ggggaagtac cggaagatgc acataccgga tgacccccag tactacgaga agttctactt
     1801 cacgccgggc gatttgggct tccgctcctg ggatacgcgt tatgccagga tcggtgtcct
     1861 ggtctgctgg gatcagtggt atcccgaagc agcccggctc accgcgctct cgggggccca
     1921 gatccttttc tatcctaccg ctatcggctg gcttcccgga gaaaaggaac agcacggagc
     1981 ccaacaacac gctgcctggg agaccatcca gcggagtcac gccatcgcga acggcgtcta
     2041 cgtctgctca gtaaaccgtg tcggtcacga gggtgacccg caaggcggcc tggagttctg
     2101 ggggggcagt ttcgtctccg accccggagg gcgtttggtg gtgaagggag gcaccgatga
     2161 ggaggtactg attgccccct gcgaccttgc caaggtggac gccagccgta cccactggcc
     2221 cttcctgcgg gatcgccgga tcgatgccta tagtgacctg accaagcgct atctcgacga
     2281 ctgacacctg caccatctcg accgccaccg tacagcgtga cccggccggg cctcacctgc
     2341 gccagtcttc ggttcagccg tgagcgttga acgtttcgga gctcgaacac cttctgacct
     2401 gggctatttc atgcccgcgg aatgggaacc gcatcgcggc acttggctga gctggcctca
     2461 taaggaggca tcttggccgg gcaagttccg cttggtcccg ccggtgttcg cgagaatggt
     2521 gaccctcctc gcagaccacg aagaggtgca catcaatgtc gcgggcccgg cgatggaagg
     2581 agaggttcgc cggttgctgg ccgacgccgg cagcgatacc cggaacgtct tctttcatta
     2641 tcacccgact aacgatgcct ggtgccgcga tcacgggccc atcttcgtcc aggggggcaa
     2701 tcggctggca aatagtcagg caattgtcga ctggggcttc aacgcgtggg gtgggaaata
     2761 cccgccctat gatctcgacg atgtcatccc gactcggatc gccgaggaat tgggactgcc
     2821 ggtttatcat cccggcatcg ttctggaggg aggatccatc gatgtcaatg gtcggggcac
     2881 gctgatcacc acggaggcgt gcctgctcaa tccgaatcgc aatccttcgc tcacccgctc
     2941 tgagattgag gcgtacctcg agaagtatct cggcgtatca cgaattctct ggttgggcga
     3001 tggcattgtc ggcgacgaca ccgacggcca cgtggacgat cttacccgct ttgtcgatcc
     3061 gacgactgtg gtcacagtgg tggagagcaa tcccg
//
LOCUS       DASRPQ010002311         1896 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4662811, whole genome shotgun sequence.
ACCESSION   DASRPQ010002311 DASRPQ010000000
VERSION     DASRPQ010002311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1896
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4662811"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..629
                     /locus_tag="VFD73_26150"
     CDS             <1..629
                     /locus_tag="VFD73_26150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77461.1"
                     /translation="RAVRAALVRLLPARLRAHRLVTPGTVLRWHRRLVTRKWICPDRT
                     GRPPVSAEIAALIARLATENNGWGYKRIKGELLKLGHRVGASTIRRILKALKILPAPE
                     RRSDTTWRKFLHAQASTMLATDFFHVDCAVTLQRLYCLFVMEVGSRYAHILGITANPD
                     GPWTVQQIRNLLMDLGDCAAASGSWSVTGPGSSPHRLTQSWPTPVSRS"
     gene            complement(893..1432)
                     /locus_tag="VFD73_26155"
     CDS             complement(893..1432)
                     /locus_tag="VFD73_26155"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZI77462.1"
                     /translation="MRIFEPRWVADITYVQTFSGWVYTAFVMDLFARRVLGRQVADHL
                     RSDLALDALEMAIWTRRDEDLGGLVHHSDRGVQYTSIRYAERLAGERAVRSVGSKGDS
                     YDNAAAESLNSLYKRELIDRKKDWQGVDDVMLATMDWVQWYNEDRIHSYSGDMPPRKY
                     EEIYYQALESGKLTSSSQT"
     gene            complement(1473..>1896)
                     /locus_tag="VFD73_26160"
     CDS             complement(1473..>1896)
                     /locus_tag="VFD73_26160"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI77463.1"
                     /translation="TQAARNFLMDLGERTGHVKFLIRDRAGQFTDSFDAVFTAAGARI
                     LLSPPQAPRANAVCERMIGTLRRELLDRMLIVNEHQLRQVLTEYLTHYNTSRPHRALD
                     QLPPAQAHTRPPQINLAEHRVHRKQILSGLINEYHIAA"
BASE COUNT          321 a          628 c          588 g          359 t
ORIGIN      
        1 accgcgcagt ccgcgccgcg ctggtccggc tcctgccggc aaggctgcga gcgcaccggc
       61 tggtcacccc cggcaccgtc ctgcgctggc accgccgcct ggtcacccgc aagtggatct
      121 gcccggaccg gacaggacgg ccgccggtca gcgccgagat agccgccctc atcgcgcggc
      181 tcgccaccga gaacaacggc tgggggtaca agaggatcaa aggcgagctg ctcaagctcg
      241 gccaccgggt cggcgcgtcc acgatccgca ggatcctcaa ggcgctgaag attctcccgg
      301 ctccggagcg gcgttccgac acgacgtggc ggaagttcct gcatgcccag gcatcgacga
      361 tgctcgccac ggacttcttc cacgtcgact gcgcggtgac cctgcagcgg ctgtactgcc
      421 tgttcgtcat ggaggtaggc agccgttacg cgcacatcct cgggatcact gccaacccgg
      481 acggtccctg gaccgtgcag cagatccgta acctcctaat ggatctgggt gattgcgccg
      541 cagcttccgg ttcctggtcc gtgaccgggc cgggcagttc accgcatcgt ttgacgcagt
      601 cttggccgac gccggtatcc aggtcgtgaa gatcccgccc cgcagcccgc gcgcgaacgc
      661 ttatgcggaa cggttcgtac tcaccgcccg gaccgaggtc accgaccgga tgctcatctt
      721 cagcgagcgg catctgcgga cgatcctggc ccgctatgag caccattaca acgggcggcg
      781 cccccatcgc agccgtcagc tccgcccgcc ccggcccgac caccctcccg cagacttcac
      841 ccaggagcgg atccagcgcc ggcctggtcc gccccggcga gtttggaggc cgctatgtct
      901 gcgaactgct tgttagctta ccggattcca gtgcctgata atagatttcc tcgtactttc
      961 tcggcggcat atcaccgcta tatgagtgga tccggtcctc gttataccac tgcacccagt
     1021 ccattgtcgc gagcatcacg tcatccactc cctgccagtc cttcttccgg tcgatgagct
     1081 cacgcttgta aaggctgttc agggattccg cagcagcatt gtcatacgaa tctcccttgc
     1141 tccccaccga ccggactgcc ctttccccgg cgagccgctc ggcataacgg atagacgtgt
     1201 actggacgcc gcggtccgaa tgatggacca ggccgccgag atcctcgtcc cgccgtgtcc
     1261 atatcgccat ctccagcgca tcgagcgcaa gatcagaacg cagatgatca gcgacctgcc
     1321 ggcccaggac gcggcgggcg aacaggtcca tcacgaaagc ggtatagacc cagccggaaa
     1381 acgtctgcac ataggtgatg tccgcaaccc agcggggctc gaatatacgg atgtggctgc
     1441 ggcctgttgt ctttcgtcat gctgcacggc tgtcaggcgg cgatgtggta ctcgttgatg
     1501 aggccgctaa ggatctgttt tcggtggact cgatgctcgg cgaggttgat ctgcggtggc
     1561 cgagtatgag cttgcgccgg cggcagttgg tccagggcgc gatgtggcct ggatgtgttg
     1621 tagtgggtca ggtattcggt cagtacctgg cgcaattggt gctcgttgac aatcagcatg
     1681 cggtcgagta gctcgcggcg cagggttccg atcatccgtt cgcagacggc gttcgctctg
     1741 ggcgcctgcg gcgggctgag caagatcctg gcgccagctg cggtgaatac cgcgtcaaag
     1801 gagtccgtga actgcccggc acggtccctg atcaggaact tgacgtggcc ggtgcgctcg
     1861 ccgaggtcca tgaggaagtt gcgcgccgct tgagtt
//
LOCUS       DASRPQ010002312         1323 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_578474, whole genome shotgun sequence.
ACCESSION   DASRPQ010002312 DASRPQ010000000
VERSION     DASRPQ010002312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_578474"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            462..941
                     /locus_tag="VFD73_26165"
     CDS             462..941
                     /locus_tag="VFD73_26165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77464.1"
                     /translation="MTLEEEHEDAGTAANAASARTNQITAHASSVLLDPFCRAFFIGN
                     SPNLVLVHGKLTVSGTSEYPDCEGSAKNKALTIRQGEVCLQVHEGTPRRGTWRNVKCS
                     TKTFPTKAFGTYKLTAGKVCPVRRQKHQYRMWQWLYLQRGALTNKASGIGPRKIITC"
BASE COUNT          267 a          407 c          410 g          239 t
ORIGIN      
        1 gtgccatgct ccgttgggct tgcccgctcc gaaggacagg ggtacccgct cccggcggac
       61 aggacagatt aactggacca ggctagcttt cctgatctgg tcgtggcagt tgtttatcaa
      121 attggcggga ctactgtaac caagagcagt gtgcaacctg gtgccgttgt agcagcccgg
      181 gacgaacatt cggaccgacc gtccgggcgc ggcacatgaa gcccgtctgc tcatagaagg
      241 gccgtgcgga tcggtcacgc gcgtcaactc agatctggcg tttcatcaca gaccgtgaag
      301 tccctgacga cagtgaccag ccgtcgaggc agatcgccga atccctccgg accgatggag
      361 acatgatgag atcgctatag agctgggcgt caagatcgca ggtgaactgg acttctcgtt
      421 cttcgcgaag aatcaggccg aggcaacggc aagggctgac cttgaccttg gaggaagagc
      481 acgaagacgc gggtactgcg gcaaatgctg cgtctgctcg taccaatcag atcactgctc
      541 acgccagcag tgtcctcctc gatccattct gccgtgcctt cttcataggt aactcgccga
      601 acctggtcct agtccatgga aagctgacag tctcaggaac ctctgaatat cccgattgtg
      661 agggcagcgc caaaaacaag gcactcacca tccgccaggg tgaggtctgc ttgcaggtcc
      721 atgaggggac gccccgccgg ggaacgtggc gtaatgtcaa gtgctccacg aagactttcc
      781 cgaccaaggc gtttgggacc tacaagctaa cagcaggcaa ggtctgtcca gtgcgccgcc
      841 agaagcacca gtaccggatg tggcagtggc tctatctcca gcgcggcgcg ctgacgaata
      901 aagcctctgg aatcggcccc cgcaaaatca tcacgtgctg agaatacagc ccagctgggc
      961 tcgcgggccg ctgcgcttac ttgcaggaaa cccaaccgtg atcctggtcg gcggacgttc
     1021 cagcgagctt cgtccccgaa ggcgagcgtc accggcccgt cggcttgtcc cctgatcagc
     1081 ggtggccgca acacccctga gcggcagttg cggacggtcg ccagcgcgct ggcgcgtccg
     1141 gacgagttgt ccgtcgttgc cggatggcgg ccgccgaact cgccgacctc gggcggcact
     1201 tcgccgatct ggaacgccag cggttcggcc gagacgagtt cggcgcgacg gtggcccggg
     1261 ttgcgggcgt tgagcaaaac cggggcatct acgacctcgg tcagttcatc ccggaagtca
     1321 gcc
//
LOCUS       DASRPQ010002313         1032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2812579, whole genome shotgun sequence.
ACCESSION   DASRPQ010002313 DASRPQ010000000
VERSION     DASRPQ010002313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2812579"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(161..>1032)
                     /locus_tag="VFD73_26170"
     CDS             complement(161..>1032)
                     /locus_tag="VFD73_26170"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI77465.1"
                     /translation="LVALMYWLRRRKRQGKATLLDPDLFRSKVFESGVSGQMLQQIAL
                     GGTMIVLPIYLQMVLEYNALKAGLSLAPLSLTMFAVAVVAGRRAARRRPAGLIRLGFA
                     ILTIGLVLLIPIVPRADSGWWLVVPLLIAGCGLGLLVSQLNNYTLSPISDERVSEAAG
                     VNSAAGSFGLSFGLAFAGAIMLATLSLSFTSLATASTVLSPAQQQQVAHALETDAQIM
                     SNTQLKQQLANHPEKIQNEIIRINTDARHLALQIALLIPILAGALGLLNSFRMMRLPD
                     PVPSETAEGMVLG"
BASE COUNT          211 a          324 c          323 g          174 t
ORIGIN      
        1 caggagctgg atcgactctc acaccgacca ggtgatcatc atcgggagct ttatcctcgg
       61 cttctggctc atcgcaaata gcatgtatct ggtcttcacc tgagattgag ctccttgcga
      121 ggcagagccc tgccccgaac agctagccgc tggccggaag tcagcccaac accatgcctt
      181 cagcggtttc cgaaggcacg ggatctggga ggcgcatcat acggaacgaa ttgagcagcc
      241 ccaaggcgcc ggcgagaatc ggaatgagaa gtgctatctg aagggctaga tgcctagcgt
      301 ccgtgttaat ccggataatc tcgttctgga tcttctcggg gtgattggcg agttgctgtt
      361 taagctgggt gttgctcatt atctgagcgt cagtctccag cgcatgcgca acctgctgct
      421 gctgggctgg ggaaagcacg gtgctcgcgg tggccaggct ggtaaagctg agggagagcg
      481 tggccagcat gatggcgccg gcaaacgcca acccgaacga cagcccgaac gatccggctg
      541 ccgaatttac tcccgcggcc tcgctcaccc gctcgtccga gatcggggag agcgtgtagt
      601 tgttgagctg ggacaccagc aggcccagcc cgcagccggc gatcaacagc gggactacca
      661 gccaccagcc ggagtccgcc cggggcacga tcgggatcag caggaccagt ccgatcgtca
      721 agatcgcgaa ccccagccgg atgaggccgg ccggacgccg tctggccgcc ctcctgccgg
      781 ccacgaccgc cacggcgaac atggtgagcg agagcggcgc gagggacagg cctgccttca
      841 gcgcgttgta ctccagcacc atctgcaggt aaatcggcag gacgatcatc gtgccgccca
      901 gggcaatctg ctggagcatc tgcccggaca cgccagactc aaagacctta gaccggaaca
      961 gatccgggtc cagaagcgtc gccttcccct gacgcttgcg gcgccgcagc cagtacatca
     1021 gcgcgacgag cg
//
LOCUS       DASRPQ010002314         2081 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_894878, whole genome shotgun sequence.
ACCESSION   DASRPQ010002314 DASRPQ010000000
VERSION     DASRPQ010002314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2081
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_894878"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1174
                     /locus_tag="VFD73_26175"
     CDS             <1..1174
                     /locus_tag="VFD73_26175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HZI77466.1"
                     /translation="VAEDLAQDALLAALERWPETGIPDNPGAWLMATAKHRAIDMFRR
                     TKRVERKHQELGLELEDRRETDTETLDQSLDDEVGDDVLRLMFMSCHPVLSTEARIAL
                     TLRLVGGLTTGEIARAFLVPESTVAQRIVRAKRTLSEARVPFEVPRGAELAARLSSVL
                     DVIYLVFNEGYSATAGEDWVRPGLCEEALRLGRILAGLAPNEAEVHGLVALMEIQASR
                     LRARVTASGEPVLLLDQDRGRWDQMLIHRGLAALQRAETLGGAGPFVLQAAIAACHAR
                     ARVADETDWKRIAELYQALVTVTPSPVIELNRAVAMSMAYGPAKGLEVADALRDEPTL
                     KKYHLLPAVRGDLLFKLGRFEEARNELQRAASLTQNARERTMLLERAEECTRYLES"
     gene            complement(1216..1719)
                     /locus_tag="VFD73_26180"
     CDS             complement(1216..1719)
                     /locus_tag="VFD73_26180"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HZI77467.1"
                     /translation="MVGHISYCIARCSLGFILIARTDSGICAISLGDEPTNLRQDLER
                     RFPEATLRVVQVTKDTLLGRALALVESPQEKGVVPLDFHGTPFQKRVWQALRDIGPGY
                     TTTYAGIAARIGAPRAVRAVARACAANPIAVAIPCHRVIRSDGAISGYRWGIHRKQAL
                     LEREAVA"
     gene            1882..>2081
                     /locus_tag="VFD73_26185"
     CDS             1882..>2081
                     /locus_tag="VFD73_26185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77468.1"
                     /translation="MAGSFSLLFTFAFIGATQTPKSPSQSSPPSRQAPPEIRAARLTG
                     TITIDGDLNEPDWSKAQPATGCT"
BASE COUNT          385 a          646 c          656 g          394 t
ORIGIN      
        1 cgttgccgaa gatctggcgc aggatgcgct gcttgctgcc ttggagcgct ggcccgagac
       61 cggcattccc gacaatccag gggcctggct gatggccacg gccaagcatc gcgccatcga
      121 catgtttcgg cgcacgaaac gggtggaacg aaagcaccag gagctggggc tcgagctgga
      181 ggatcggcgg gagaccgaca ccgaaactct ggaccagtca ttggatgatg aagtcgggga
      241 cgacgtgctc cgtcttatgt tcatgagctg ccatccggtg ctctcaaccg aagcccggat
      301 tgcgctcacc cttcgactgg tcgggggact gactaccggg gaaatcgcgc gtgcattcct
      361 ggtgccggag tcgacggtgg cccagcggat cgtccgggcc aagcgcaccc tgtccgaagc
      421 gcgggttccg ttcgaggtgc cccgcggtgc cgaattggcg gcacggcttt catcggtgct
      481 cgatgtgatt tacctggtgt tcaacgaagg gtactccgca accgcgggtg aggattgggt
      541 gcgacccgga ttatgtgagg aggcgttgcg actggggcga atcctggccg gcctcgcccc
      601 caacgaggcc gaggtgcacg ggctggtggc cctgatggag atccaggcct cccggcttcg
      661 ggcccgggtc accgcctcag gcgagccggt gttgttgctg gaccaggacc gcggacgttg
      721 ggatcagatg ctcattcacc ggggcctggc cgccctgcaa cgcgccgaga ctctcggcgg
      781 agcaggacct tttgtgctgc aagcagcgat cgcggcgtgc catgcccgcg cccgcgtggc
      841 ggatgagacc gattggaaac gaattgcgga gctctaccag gcgctcgtca cggtgacgcc
      901 gtcgccggtg atcgagttga accgcgcggt cgcgatgtcg atggcctatg gaccagccaa
      961 aggtctcgag gttgccgatg cgctccggga cgaaccgacg ctcaagaagt atcacctctt
     1021 gccggctgtc cggggcgatc tgctgttcaa actgggccgg ttcgaggaag caaggaacga
     1081 actgcagcga gcagcatcgc tcacccagaa cgcccgggag cgcaccatgc tgctcgagcg
     1141 cgctgaggag tgcacccgct acttggagtc gtgaaagctg gtgttccctt caaccggcca
     1201 gctcgtcagc cccagtcatg ccactgcttc cctctccagt agcgcctgct ttctgtgaat
     1261 gccccagcgg tatcctgaaa tggcgccatc actcctgatg acccggtggc agggaatggc
     1321 caccgcaatc ggattggcgg cacacgcccg ggctacggct ctgactgccc gcggagctcc
     1381 gatccgggcg gcgatgccgg cgtaggtggt cgtatagccg gggccgatgt cccgcaacgc
     1441 ttgccagact cgcttctgaa agggtgtccc gtggaaatcg agaggcacca cgcctttctc
     1501 ttggggagat tcgacgagag cgagagctct tcccaaaagt gtatctttgg tcacctgcac
     1561 gacccgaaga gttgcctctg ggaaacgccg ctcgagatcc tgacgaagat tggtgggctc
     1621 gtctccgagg gagatcgcac aaatcccact atcggttcgg gcgatgagga tgaacccgag
     1681 cgagcaccgg gctatgcagt agctgatgtg gccgaccatc gtttgattct cctttattct
     1741 gagttccgtc tccagcaccg ccaagtctac cggcaatcgc gtcggtacgc cgcccgattc
     1801 ttgcgcttaa actcggaggc cttggcaacc tttttctgct ttgaaagatc caagtcggga
     1861 actcatagaa ccaaggaaat catggccggc agcttttctc ttctcttcac cttcgcgttc
     1921 atcggcgcta ctcagactcc caagtcccca tcccaatcct ccccgccaag ccggcaagct
     1981 cccccggaga tcagggctgc gcgactgacg gggacgatca ccatagatgg cgacctcaac
     2041 gaacctgatt ggtcgaaggc ccaaccagct accggttgca c
//
LOCUS       DASRPQ010002315         2490 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3085403, whole genome shotgun sequence.
ACCESSION   DASRPQ010002315 DASRPQ010000000
VERSION     DASRPQ010002315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2490
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3085403"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..231
                     /gene="purS"
                     /locus_tag="VFD73_26190"
     CDS             <1..231
                     /gene="purS"
                     /locus_tag="VFD73_26190"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HZI77469.1"
                     /translation="RVMPRAGLLDPQGQAVEHALTALGFEEAGAVRVGRAIELDLEAG
                     SRDEAEARVRLMCDKLLANPVTEDYLVNVEED"
     gene            231..950
                     /gene="purQ"
                     /locus_tag="VFD73_26195"
     CDS             231..950
                     /gene="purQ"
                     /locus_tag="VFD73_26195"
                     /inference="COORDINATES: protein motif:HMM:NF002957.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HZI77470.1"
                     /translation="MPRVAVVRFPGSNCDFDTLSAASRYGAEAYFVWHRDTDLRQADI
                     VILPGGFSYGDYLRSGAIARFSPVMQAVQRHAEAGGPLLGICNGFQILCEAQLLPGAL
                     MRNAALSFVSKPVDVTVEQTDTAFTCDYEPGARLRLPVAHGEGRYVASPDTLRMLEAE
                     GRVVLRYVAATERSPFQPNPNGSANHIAGVCNAAGNVVGIMPHPERAADRVLGLTGGT
                     GFFTSPVSAFEMRSASGVSAQ"
     gene            947..1315
                     /locus_tag="VFD73_26200"
     CDS             947..1315
                     /locus_tag="VFD73_26200"
                     /inference="COORDINATES: protein motif:HMM:NF024845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HZI77471.1"
                     /translation="MKSDKPSRNEEEYFAREDAELLRKQRERAHAAAVEAERKTHYMK
                     CPKDGYDLASSEYHGVQIETCPHCGGMWLDADEIAAVAHEDHTSVISRVLSDALSTFR
                     RSPRARRIEHPVHDPGNPLS"
     gene            1326..>2490
                     /gene="purL"
                     /locus_tag="VFD73_26205"
     CDS             1326..>2490
                     /gene="purL"
                     /locus_tag="VFD73_26205"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HZI77472.1"
                     /translation="MTVSGIASAVTEAITAPGERAVTAAVVREHNLNELEYSRILEML
                     GRTPTLTELGVFSALWSEHCSYKHSRPILRHFPTTGPHVVQGPGENAGVIRLPEGWAV
                     AFKIESHNHPSAVEPYQGAATGVGGILRDVFTMGARPVALLNSLRFGPLDHPPRNRYL
                     FAGVVRGIGDYGNCVGVPTLGGGVGFAPSYTGNPLVNAMCVGLLRERDLIRAAAQGVG
                     NVLLCVGARTGRDGIHGASFASEELTEKSESRRPQVQVGDPFTEKLLLEASLELITSR
                     LIVAIQDMGAAGLTSSSAEMAARGGVGVEIDTGRVPTREEGMTPYEILLSESQERMLV
                     VATPGQVPQVQAVCAKWELTATPIGQVTDDGIYRVKHHGQVVVAIPAQRLVNDC"
BASE COUNT          433 a          773 c          845 g          439 t
ORIGIN      
        1 cgggtaatgc ctcgagcggg cctgcttgat cctcagggac aggcggtgga gcatgccttg
       61 accgcgctgg gcttcgagga agccggcgcg gtccgggtgg gccgggccat cgagctcgac
      121 ctggaggccg gctcccgcga cgaggccgaa gcccgggtcc ggttgatgtg cgataagctc
      181 ctggccaatc cagtgaccga agattacctg gtgaacgtgg aggaagactg atgcctcgtg
      241 tcgctgtggt tcgattcccc gggagcaact gcgatttcga tactctgagt gcggcgtcgc
      301 ggtatggcgc cgaagcgtat ttcgtgtggc atcgcgacac cgacctgcgg caggcggata
      361 tcgtaatcct gcccggcgga ttcagctacg gagactatct gcggtccggt gccatcgccc
      421 ggttcagccc ggtgatgcag gcggtacagc gtcacgctga ggccggcgga cctctcctcg
      481 ggatttgtaa cggctttcag atcctgtgcg aagcccaact gctgccgggc gccctcatgc
      541 ggaacgcggc gctcagcttc gtctccaagc cggtggacgt gacggtggag cagaccgaca
      601 cggcattcac ctgcgactat gagcccggcg cgcggctccg gctgccggtc gcccacggtg
      661 agggccgcta cgtggcatct cccgatacgc tccgcatgct cgaagcggag ggccgggtgg
      721 tgctgcgtta tgtcgcggcc acggaacgct caccgtttca gcccaacccc aacgggtcgg
      781 ccaatcacat cgcgggcgtg tgcaatgctg ccgggaacgt cgttgggatc atgccgcatc
      841 cggagcgcgc cgccgaccgg gtgttgggcc tgaccggcgg aaccggattt ttcacgtccc
      901 ctgtgtcggc cttcgagatg cgctccgcat cgggagtctc tgcgcaatga agtcggacaa
      961 gccgagccgg aacgaggaag aatatttcgc tcgcgaggac gcggagctgc ttcgcaaaca
     1021 gcgcgagcgg gcccacgccg ctgccgtgga ggccgagcgg aagacccact acatgaagtg
     1081 ccccaaggac ggctacgatc tcgcgagcag cgaataccat ggcgtgcaga tcgagacctg
     1141 cccccattgc ggagggatgt ggctggatgc cgatgagatt gcggcagtgg cgcacgagga
     1201 ccataccagc gtgatcagcc gggtactgtc ggatgcgctg tcgacctttc ggcgctctcc
     1261 ccgggcgcgc cggatcgagc atcccgtcca cgaccctggc aaccccctca gctgaggact
     1321 ctctcgtgac tgtttccggg atcgccagcg ctgtcaccga agcgatcacc gcaccgggcg
     1381 agcgcgcagt aacagcggcg gtggtgcgcg agcacaatct caacgagctc gagtacagcc
     1441 ggatcctcga gatgctgggg cggaccccta cattgaccga gctcggggtc ttttccgcct
     1501 tgtggtcgga acactgctcg tacaagcact ccaggccgat cctcagacac tttcctacca
     1561 ccggtccgca cgtcgtacag ggtcccggtg agaacgcagg ggtgatccgg ctccctgagg
     1621 gctgggcggt agcattcaag atcgagtctc acaatcaccc ctccgccgta gagccctatc
     1681 agggcgcggc caccggcgtc ggcgggattc tgcgcgacgt tttcaccatg ggtgcgcgcc
     1741 cggtggcgct tctcaacagc ctcagattcg gtccgctcga tcaccccccg cgcaatcgat
     1801 acctctttgc cggagtggtg cgcgggattg gtgactacgg caactgtgtc ggcgtgccta
     1861 cactgggcgg cggggtgggg ttcgctccga gctataccgg aaacccgctg gtaaatgcga
     1921 tgtgcgtggg actcctgcgc gaacgcgacc tcatccgggc ggcggcccag ggcgtgggca
     1981 acgtgctgct ctgcgtcggc gcccgaaccg gacgggatgg aatccatgga gccagctttg
     2041 cgtccgagga gctgaccgag aagagtgaaa gccggagacc ccaggtacag gtcggggatc
     2101 cgttcaccga gaagctgctg ctggaagcca gcctggagct catcacttcc cgcttgatcg
     2161 tcgcgattca ggatatgggc gctgccggcc tgaccagcag ctccgccgag atggcggcac
     2221 ggggcggtgt gggagtggag atcgataccg gtcgggttcc cacccgagaa gaggggatga
     2281 ctccctatga gattctgctc tcggagtctc aagagcggat gctggtggtc gctacacccg
     2341 gccaggtgcc gcaagtgcag gcggtctgcg ccaagtggga gttgaccgcg acaccgattg
     2401 gtcaggtgac ggatgatggg atctaccggg tgaagcacca cggtcaggtt gttgtcgcca
     2461 taccggcaca gcggctagtg aacgactgtc
//
LOCUS       DASRPQ010002316         1213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3439081, whole genome shotgun sequence.
ACCESSION   DASRPQ010002316 DASRPQ010000000
VERSION     DASRPQ010002316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3439081"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1213)
                     /locus_tag="VFD73_26210"
     CDS             complement(<1..>1213)
                     /locus_tag="VFD73_26210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77473.1"
                     /translation="FSLRHVTAVACLVLTNPSVMAAESQPDTVRLHSLSAGPELGKLL
                     SDLASITKGAFTTAEAARIQRAVTDSMVAPESSPLGQIKRRWAYLVRPYEEHQAVLML
                     DFLSTRSRLVDLTLVSDPVVMRLIRTYLDTLEIDSLLPLEQVRLTLTEERRPGLDPRP
                     ILTVSTVRQFDCLGLHIDHDLNPGERDTVYLNLHGVTPEHNPCAARGPALTTRAFPPG
                     ALFGWRKKSTLLVSYRNRRDSLEVEMSDTTMKLTPLSSSLVTADARPRWRYPRNSFAF
                     YCSTRAEGALAVCRDVDRWLTREPGISRLSIPSGWVNPYDPDPSENPDRIAAVFRYAG
                     DQTFERLRLCFGAIENQIRDVTGLLLFLEDWHGTRIVAVSRGATEGRQVQLPKRITAT
                     NACRTPRWVDQS"
BASE COUNT          245 a          346 c          395 g          227 t
ORIGIN      
        1 ggactggtct acccatcgtg gagtcctgca ggcgttggtt gcggtgattc gtttgggcag
       61 ctgtacctgg cggccctcgg tcgctccgcg ggacacggca acgatgcggg tgccgtgcca
      121 gtcctccaga aaaaggagta gcccggttac atctcggatc tggttttcaa tggcgccgaa
      181 acagagacgc agccgctcga aggtctggtc cccagcatac cggaagacag cagcaatgcg
      241 gtctggattc tccgaaggat ctgggtcata ggggttgacc cagccggatg gtatcgagag
      301 gcgggagatg cctggctctc gtgttagcca gcgatccacg tcgcggcaga ccgcgagtgc
      361 cccctcggct cgggtagagc agtaaaacgc aaagctgttg cgtgggtagc gccagcgtgg
      421 gcgagcatcc gccgtgacga gactggagct gagcggcgtg agcttcatag tcgtgtccga
      481 catctccacc tccagcgagt cgcgtcggtt tcgatagctc accagcaaag tagacttttt
      541 tctccagcca aagagtgcgc ctggcgggaa tgcccgggtg gtcagggcag gacctctggc
      601 tgcgcaaggg ttatgctccg gcgttacccc gtggagattc agatagaccg tatcgcgctc
      661 acctggattg agatcgtgat cgatgtgaag acccaagcaa tcgaattgtc tcactgtcga
      721 cactgtgagg atcgggcggg ggtccagccc cggcctgcgc tcctcagtca gagtgaggcg
      781 gacctgttcc agaggaagga gggaatcgat ctcgagggta tccaggtagg ttcgaatcag
      841 gcgcatcaca actggatcgg aaaccagcgt cagatcgacc aaccgacttc gggtgctgag
      901 gaaatccagc atcagcacgg cctgatgctc ctcgtagggc cgcaccaggt aggcccaccg
      961 tcgcttgatc tgccccagcg gactggattc gggcgcgacc atggagtcag tgacagcccg
     1021 ctgaatcctg gcagcctctg cagtggtaaa cgcccctttc gtgatcgatg ccaggtcact
     1081 cagcagcttg cccagctccg gaccggcaga aagcgaatgc aagcgcacgg tgtcgggctg
     1141 agactcggca gccatcacgc tggggttggt cagcaccagg caggcgactg cggtaacatg
     1201 gcgcaagctg aat
//
LOCUS       DASRPQ010002317         1312 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3439130, whole genome shotgun sequence.
ACCESSION   DASRPQ010002317 DASRPQ010000000
VERSION     DASRPQ010002317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1312
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3439130"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            120..479
                     /locus_tag="VFD73_26215"
     CDS             120..479
                     /locus_tag="VFD73_26215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77474.1"
                     /translation="MSETGPTRPVDALRALSLILALLALSGSGSFAYAAESSRAAVQK
                     QLQAKVGELKVKQSQLVTERDEAQSQLATAQDEIADLRAQLATAQRRLEELEAAVSKT
                     GSVQAPKAPAKTRNKAR"
     gene            complement(765..1079)
                     /locus_tag="VFD73_26220"
     CDS             complement(765..1079)
                     /locus_tag="VFD73_26220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77475.1"
                     /translation="MALTGRFQFRKTLWGKIVLQLEDEVKPLWSGSKPKALKRRWRDA
                     KLMDLADPALRPLIDMRFKPHLWARSLGLEAELAPRDLTGAHDGGEAGSLQSGEVRRI
                     AH"
     gene            1078..>1312
                     /locus_tag="VFD73_26225"
     CDS             1078..>1312
                     /locus_tag="VFD73_26225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77476.1"
                     /translation="MTLSDCIVGLQRNGHGFGPFHVRVAHRDRAASLVRVGQPDLPPL
                     VDERVAAAALGPLQPDEMLSGLNRVPSEPAVPRL"
BASE COUNT          237 a          419 c          442 g          214 t
ORIGIN      
        1 tttcagcttg ccgtcgagca tgccgacagc ctttgcagtc caagggtcta tccttgttgc
       61 agcccgaggg ccgaaactgg tcgcgaagtc cgaggttgtc tgtgcgagga gagcgagcga
      121 tgagcgagac cggcccgacc agacccgtgg acgcgctccg ggctctcagc ctcatcctgg
      181 ccctcttggc cctcagcggc tcgggcagct tcgcttatgc cgccgagtcc tccagggccg
      241 ccgtccaaaa gcagcttcaa gcgaaagttg gtgagctaaa ggtcaagcag agccaactcg
      301 tcacggagcg ggatgaagcc cagtcacaac tcgcgaccgc tcaggacgag attgcagacc
      361 tgagggcgca gctggccacg gctcaaaggc gactggagga gttagaggca gccgtgtcga
      421 agacggggag cgtccaggct ccgaaggcgc ccgctaagac ccggaacaag gcccgatgag
      481 cacgggtgtg acgcgagcgg attaaacggc agagccggtg cggtatctct aggggcgggg
      541 tagagcgcgg cggcggttac gcttccttaa cgccttgcag acaacgtgat ggggtctcgc
      601 gcaggcgaga ctggcaccga tctgaccacg gtgcagacag cccctccccg gttagggcag
      661 ccgggagggg ctttgtcgtt tcgcacagcg gcgatcgtag acgggctcga ccctacaacg
      721 cctagcttcg acagctggag gggcgtcgtg gtcgagggtg ggcttcagtg cgcgatccgg
      781 cgcacctcac cgctctgcaa ggaaccggcc tcaccgccat cgtgagcccc ggtcaggtcc
      841 cgtggcgcaa gctccgcctc cagccccagg ctgcgcgccc agaggtgcgg cttgaagcgc
      901 atatcgatga gcgggcgtag ggccgggtcg gccaagtcca tcagcttggc atcgcgccag
      961 cgccgcttca gagccttcgg tttggagccg gaccagagcg gcttcacctc gtcctcaagc
     1021 tgcagcacga tcttgcccca aagcgtcttg cggaactgga accgacctgt gagcgccatg
     1081 accctctccg actgcatcgt tggtctgcag agaaacggcc acggttttgg gccgttccat
     1141 gttcgtgtgg cgcaccgcga tcgcgcggcc agtctggtgc gagtcgggca gccggacctc
     1201 ccaccactgg tcgatgagcg cgtagcagcg gcggcgctcg gtccattgca gccagacgag
     1261 atgctgtccg gcctcaaccg ggtgccaagc gaaccagcgg tgccacggct cg
//
LOCUS       DASRPQ010002318         1106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2455779, whole genome shotgun sequence.
ACCESSION   DASRPQ010002318 DASRPQ010000000
VERSION     DASRPQ010002318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2455779"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            447..956
                     /locus_tag="VFD73_26230"
     CDS             447..956
                     /locus_tag="VFD73_26230"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HZI77477.1"
                     /translation="MADQPDRQPPTPLTPDEELAWRALARAVLVIPRVLDGELLQAQG
                     LSLTEYSVLINLSEEPGRSMRMSELANDVSISVSGLTRVVERLSRQGLVERVKADTDD
                     RGQLAVLTPAGFGRLEQAYPIHLAGVRKHVMDHLAALDLSAFAEAMSGIAAAEMGPPI
                     RRTTPASPA"
BASE COUNT          208 a          343 c          357 g          198 t
ORIGIN      
        1 cggtagtcgt agtgcttgct tgtgtggcct ttgctgaaac cgcagcgcaa ctcgacatac
       61 atgaatttgt ggaactcgta gtaaccgcac aactcggcgg cgtcgaacgc gatggtgacg
      121 ggcggcgaga cgcttggaat cttctcgtcc acgcgaatgc attgctcgca agcgcaggaa
      181 atcgagtggt agtgcaaggt gccaggcatt gcgacgcgca tccccatgtg cgtgggcgaa
      241 ctgcacggcg tgcaatgttt cggtggtgcg gtgggtgctg gcgacctggg tgttcatggc
      301 tttcgtacct ccgcggtaac cccggctgtg aggccggaga cgggcgtgtg gcgtgttgac
      361 ggcgcacatc gtccagccag aaatctgttt gtacaaacaa gtaggtgtag ttgagtttgc
      421 tatgtcaagc aactaggttg atggtcgtgg cagaccaacc agaccggcag ccgcccacgc
      481 cgctgacccc ggatgaagag ctggcatggc gcgccctcgc acgcgcggtc ctggtcatcc
      541 cgcgggtgct ggacggcgag ctgctccagg ctcaggggct gagcctcacc gagtactccg
      601 tactgatcaa cctgtccgag gagcccggcc ggtccatgcg gatgagcgag ctggccaacg
      661 acgtctcaat ctcagtcagc ggactgaccc gcgtcgttga gcgcctgagc cgtcagggac
      721 tggtcgagcg ggtcaaagcc gacaccgacg accgcggcca gctggccgtc ctcaccccgg
      781 cgggattcgg ccggctggag caggcctatc ccatccacct agccggcgtg cgcaaacacg
      841 tcatggatca cctggcagcc ctcgacctct ccgcgttcgc cgaagccatg tcgggtatcg
      901 ccgcggccga gatgggcccg ccaatccggc gcaccacccc ggcctcgccc gcctgataaa
      961 cgatcacagg tgatcggctg gaagaccatc acgctccacc ggcgaaagag gtcaaggaac
     1021 accggaaggg accggtgccg tggtttgact tcccatcagc ttcagccgag aaggtcacgg
     1081 gcttcggaat caagcccgat gttcgc
//
LOCUS       DASRPQ010002319         1020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2455926, whole genome shotgun sequence.
ACCESSION   DASRPQ010002319 DASRPQ010000000
VERSION     DASRPQ010002319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2455926"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..989)
                     /locus_tag="VFD73_26235"
     CDS             complement(<1..989)
                     /locus_tag="VFD73_26235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77478.1"
                     /translation="MTPQKHKDETLRSLVDLTEAIARKQLSVMLYEDLHWADPTSLEV
                     LDLLIDRVRTIPLLIVFTHRPEFRSRWAQHGHVTGLNLSKLTRAQSGAMVSRVTGTKA
                     LPADLLEEILTKTDGVPLFVEELTKSILESGELKDAGDHYDYSGTAHSITIPATLRDS
                     LMARLDRLGSAKEVAQLAAVLGREFTYDLVQRIAPQDQNTLQAGLGQLVAAELLYQRG
                     RPPRARYVFKHALIQDAAYASLLKSVRQQIHQRTAQVLEAQCPEIVATQPELLAHHLT
                     EAGRLTEAVGYWQRAGERAVARSAHLEAISHLTTGVAVLQTLPETAERIQQELL"
BASE COUNT          159 a          323 c          344 g          194 t
ORIGIN      
        1 agcagctcct gctggatgcg ctcggcggtt tccggcagcg tctggagcac cgcgaccccg
       61 gtcgtcaggt ggctgatcgc ctccaggtgg gcggagcgcg ccaccgccct ctcgcccgcc
      121 cgttgccagt acccgacggc ctccgtcagg cggccggcct cggtgaggtg atgggcgagc
      181 agctccggct gggtcgccac gatctcggga cactgcgctt cgagcacctg cgccgtccgc
      241 tggtgaatct gctgccggac gctcttgagc agagacgcat aggccgcatc ctggatcaac
      301 gcatgcttga acacgtatcg ggcccggggc ggccggccgc gttgatagag caactccgcg
      361 gccaccagct gcccgaggcc cgcttgcagg gtgttctggt cctggggggc aatacgctgg
      421 accaggtcat aggtgaactc ccgtcccagc accgccgcga gctgcgcgac ctccttggcc
      481 gagccgaggc ggtcgaggcg ggccatcagc gagtcgcgca gcgtggccgg gatagtgatg
      541 ctgtgagcgg tgccgctgta gtcgtagtga tcgccggcgt ctttgagctc tccggattcg
      601 aggatggatt tggtgagctc ttccacgaac agcggcacgc cgtcggtctt ggtcagaatt
      661 tcctcgagca agtccgcggg tagcgctttc gttccggtca cgcgggatac catcgccccg
      721 ctctgcgctc gggtgagctt ggataggttc aagccagtga cgtggccgtg ctgggcccag
      781 cgcgacctga actcgggtcg atgggtgaac acaatgagca gcgggatggt tctcacccga
      841 tcgatcaaca ggtcgagcac ttccagcgag gtggggtcgg cccagtgcag atcttcgtac
      901 agcattacgc tcaattgctt gcgcgcgatc gcttcggtga gatcgaccaa gctccgcaac
      961 gtctcatcct tatgcttctg cggggtcatg ggcaatgcgc cgtaacgctc ttcacaaggg
//
LOCUS       DASRPQ010002320         1073 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_277389, whole genome shotgun sequence.
ACCESSION   DASRPQ010002320 DASRPQ010000000
VERSION     DASRPQ010002320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277389"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..334
                     /locus_tag="VFD73_26240"
     CDS             <1..334
                     /locus_tag="VFD73_26240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77479.1"
                     /translation="FVVHSHPMRPGEQGSSPVPVAPPREPWLDAALCAGAQAAAAAVE
                     LERQAVAVLVETVVQSQVIAFIAAAGRSGVEEVYGVPYLDVGCDVCFHVCWVHHFSPL
                     ITAIRREP"
     gene            complement(525..>1073)
                     /locus_tag="VFD73_26245"
     CDS             complement(525..>1073)
                     /locus_tag="VFD73_26245"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI77480.1"
                     /translation="WEGTIEYTFMAPVRRMTHLMGICLFAIGYGLARTVIVLIAAVAI
                     FNLDFSHANLLGTLAILAASIVPLIGLAILTSVLPLLSPQKGEQMSFAVQGFLLLVSG
                     VYYPLSVLPLPLQLAGTLSPLTYSLEGMRRSLLDGAGVGDLLPTIAVLVGMGAVLIPL
                     SVVVFTRAENRAKRLGLLKRSG"
BASE COUNT          198 a          343 c          343 g          189 t
ORIGIN      
        1 ctttgtcgtc cactcgcacc cgatgcgccc cggtgaacaa gggtcatcgc ccgttcccgt
       61 ggcgccgcca cgggaaccct ggctggacgc ggcgctgtgt gcgggcgcac aggctgcagc
      121 cgcagccgtg gagctcgagc ggcaggcggt tgccgtgctt gtcgaaacgg tggttcagtc
      181 ccaggtcatc gccttcatcg cggctgcggg gagaagtggc gtagaggagg tgtatggcgt
      241 gccttacctg gacgtagggt gcgacgtatg cttccatgtc tgctgggttc accacttctc
      301 cccactgatc accgcgattc gccgcgaacc ctaacaatcc cggttaagcc tgtcaatacc
      361 tttaccacaa gatctagatg gctctgaatg gcttgatgac aaccggatcc atcatgtggg
      421 ggcatccgtt ggcgcaggcc ctatatgttg tggcgaaacc ttacagcgtc gaacatcagt
      481 ttggtgtcgc ccaaaaccgg tggcggcgtg ttgcttacgt tcctttaccc actccgcttg
      541 agcagtccca gccgtttggc ccggttctcc gcccgcgtga agaccacgac ggagagcggg
      601 atcagcaccg cgcccatccc caccaggacg gcgatggtcg gcagcaggtc ccccaccccc
      661 gcgccgtcca gcaggctgcg cctcatgcct tcgagcgagt acgtgagcgg gctcagcgtc
      721 cccgccagct ggagcggcag gggcagcacg ctcagcgggt agtagacccc ggagaccagg
      781 agcaggaacc cctggaccgc gaacgacatc tgctcacctt tctgaggtga aagcaggggc
      841 agcaccgagg tgaggatcgc caggccgatc agggggacga tcgacgcggc caggatcgcc
      901 agggtcccga gcaggttggc atgggagaag tccaggttga agatcgcgac cgccgcgatc
      961 agcacgatca ccgttcgcgc gagcccgtaa ccgatggcga aaaggcatat gcccatcagg
     1021 tgggtcatgc gccgcacggg cgccatgaac gtgtactcga tcgtgccttc cca
//
LOCUS       DASRPQ010002321         1201 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1863410, whole genome shotgun sequence.
ACCESSION   DASRPQ010002321 DASRPQ010000000
VERSION     DASRPQ010002321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1201
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1863410"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..362)
                     /locus_tag="VFD73_26250"
     CDS             complement(126..362)
                     /locus_tag="VFD73_26250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77481.1"
                     /translation="MDRVNAFQMIQRRASVEGIQTRLGNHTFRATGITIFLLNGGTLE
                     KAQQMAAHESPRTTKLYDRTNEAVSLDEVEKVVF"
     gene            complement(402..1082)
                     /locus_tag="VFD73_26255"
     CDS             complement(402..1082)
                     /locus_tag="VFD73_26255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77482.1"
                     /translation="MDNEAKVVRLPGGSVVATYREIADHFGLSNPEKGRQKATRAGWQ
                     AEPRNHPADPVRVRVPQEVWDEASRSRERAARFRARGQARGASLMREGERPQVAHEPS
                     SRPEEILPLLRQLEAAHATLREQLARAEERAKRAEEERDAAQTATAKLRDEREAERVA
                     RQRAEGEIDGLKLGLEHMQEALAHARKEATETAARAEQAARAAKDANERLARLYSRGL
                     WARVRNRP"
BASE COUNT          195 a          441 c          338 g          227 t
ORIGIN      
        1 gcgacatcgc tgctcgagag tggggtgacg gccgccttcg cacatatcgc aaaacatcac
       61 acccggaggc tagaggaagc tcaatcccaa ccggtcaggg aatcctccgt cccggttaga
      121 acacgttaga acaccacctt ctctacctca tccaagctca ccgcctcatt cgtccggtca
      181 tacagcttgg tggtccgcgg cgactcatgc gccgccattt gctgcgcctt ctcaagcgtg
      241 ccgccattca gcaggaagat ggtgatcccg gtcgcccgga aggtgtggtt gccgagccgg
      301 gtctggatcc cctccacact ggcccggcgt tggatcatct gaaacgcgtt gacccgatcc
      361 aacggaagag gtcgcgggcg ggtcggagag catgccgcca ctcatggccg attccgcacc
      421 cgcgcccaca gtccgcgcga atagagccgc gccagccgct cgttcgcatc cttggccgcg
      481 cgggctgcct gctccgccct cgctgcggtt tcggttgcct ccttgcgcgc atgcgccagc
      541 gcctcctgca tgtgctccag gcccagtttc aaaccgtcga tctcgccctc ggcacgctgc
      601 cgggccacac gctccgcttc ccgctcgtcc cggagcttcg ccgtcgccgt ctgggcagcg
      661 tcacgctcct cctccgcccg ctttgcccgc tcttcggccc gggctagttg ctcgcgcagc
      721 gtggcatgag cagcctctaa ctgcctaaga agagggagta tttcttccgg ccttgaggaa
      781 ggctcatgcg cgacttgagg cctctccccc tcacgcatga gagaagctcc cctcgcctgt
      841 ccccgagcgc ggaaccgagc tgcccgctcc cgggagcgag aggcttcatc ccatacctct
      901 tgaggcaccc tcactcgcac tggatcagca gggtggttcc gcggctcggc ttgccaaccc
      961 gcccgggtcg ctttctgccg ccccttctcc ggattcgata agccgaagtg gtccgcgatc
     1021 tcgcggtagg tcgccaccac gctgccgcct ggcagccgca caacctttgc ttcgttatcc
     1081 atgaagccgc cccccactca aatggcggag gagtccaccc ttcaaacagg ccggagtcca
     1141 ctcctaagag acccccgtat ggtggaagga tacccctcat gagctgaagg ggggctcatg
     1201 c
//
LOCUS       DASRPQ010002322         1594 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3086423, whole genome shotgun sequence.
ACCESSION   DASRPQ010002322 DASRPQ010000000
VERSION     DASRPQ010002322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3086423"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            101..544
                     /locus_tag="VFD73_26260"
     CDS             101..544
                     /locus_tag="VFD73_26260"
                     /inference="COORDINATES: protein motif:HMM:NF018663.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZI77483.1"
                     /translation="MELDIYLNYKGNCEEAFRFYERHLGGKITMMMRHGEMSDQTNVP
                     PDWKNAILHARIEIGKTVLMGADIPSAEPMRSAYLTLTVDSDEEAERLYALLSDGGQI
                     FMKMEETFFASRFAMLRDRFGTSWMLLHERRTTAQRPRETQGAAV"
     gene            609..1151
                     /locus_tag="VFD73_26265"
     CDS             609..1151
                     /locus_tag="VFD73_26265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77484.1"
                     /translation="MASSSDRALDRLAALGLLVGALFGLAGTFANSPRVQATLWASDS
                     LGLVIATSLLTMKYFRAGADIVAAGYLVFAIGESVLLSGTAAGPSASVPAFAAGTALW
                     AGSLALISAPRHFPVWLRLLGLGSACLFAITAARIYAGEKLLPTASPLPFFAYPLLVA
                     TLLGWAWMLVSSKRRDARGE"
     gene            1144..1509
                     /locus_tag="VFD73_26270"
     CDS             1144..1509
                     /locus_tag="VFD73_26270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77485.1"
                     /translation="MSNSLKFGAGLAVVAGGLFWYFTPFCCSTGLQAEHARVFFEMAR
                     LSGAQQAFFQQHHRYADDLTELRFQPQSRVLLDFVFSDSSLQVRGTSARYPEITCLFQ
                     VTPDTKAVGPPACADESVR"
BASE COUNT          278 a          503 c          496 g          317 t
ORIGIN      
        1 gcgagctgcg taccctgcgc ggggagggga cgtcgtcagt cggtcacggc agcgaacatc
       61 ctttcacctt gacctatgag ttggagtaag cgagggattt atggagctcg acatctatct
      121 caactataaa ggaaactgcg aagaggcgtt ccgcttctat gagcggcacc tgggcggcaa
      181 gatcacgatg atgatgcggc acggcgagat gtcggatcag accaacgtac cgcccgactg
      241 gaagaacgcc atcctgcacg cccggatcga gatcgggaaa acggtgctca tgggagccga
      301 tattccctcg gccgagccca tgcgcagcgc atatctgacg ctcacggtgg acagcgacga
      361 ggaagcggaa cgcctctatg cattgctttc cgacggcggt cagatcttca tgaagatgga
      421 ggagaccttc ttcgcgtccc gctttgccat gctccgcgac cgattcggca cgtcctggat
      481 gctcctccac gagcgccgga cgactgcgca gcgtcccaga gagacgcagg gggccgccgt
      541 ctgaagaggc gacagctccg tcgcctcgcc gatgtgccgt ccgaagccgg ctgaagacga
      601 gcctcaggat ggcctcctcg agtgaccgag cgctcgaccg gttggcagca ctgggtttgc
      661 tcgtgggtgc tctcttcggg ctggccggta cctttgccaa ctctccgagg gtccaggcga
      721 cgttgtgggc gagcgacagc ctcggcctgg tgatcgccac cagtctcctc acgatgaagt
      781 acttccgagc tggagcggat atcgtggccg ctggctacct cgtgttcgcg atcggcgaga
      841 gtgttctcct gtcgggaact gccgcgggcc cgagcgcgag tgtgcccgcc ttcgcggctg
      901 ggaccgcgtt gtgggcaggg tcgctggccc tcatcagtgc gccgcggcac ttcccagttt
      961 ggctacgact cctgggtctc ggctcggcat gtttgtttgc catcaccgcg gcacgcatct
     1021 acgccggcga gaaactcctg cccaccgcgt cgccgctccc cttcttcgcc tatccactgc
     1081 tcgtcgcgac actgctgggt tgggcgtgga tgctggtctc gtcgaagaga cgcgatgcca
     1141 ggggtgagta atagcctgaa gttcggggcc ggactggcgg tcgtggccgg cggactgttc
     1201 tggtatttca cccctttctg ctgctcgacc ggactgcagg cggaacacgc acgggtattc
     1261 tttgagatgg ctcggctcag tggtgctcag caggccttct tccagcagca ccaccggtat
     1321 gccgatgact tgaccgagct acgctttcaa ccccagtcgc gggtgctcct ggactttgtc
     1381 ttcagcgatt cctcacttca ggtccgtgga acatccgccc gctaccccga aataacttgc
     1441 ctgtttcaag tgacaccgga cacgaaggct gtcggacctc cagcctgcgc agacgagagt
     1501 gttcgctagc ccaccggaca atcggagcac gccatgagca gcaacacccg gagagacttt
     1561 ctcatcagtg ccccagccgg cctggcggcc ttca
//
LOCUS       DASRPQ010002323         1948 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3740879, whole genome shotgun sequence.
ACCESSION   DASRPQ010002323 DASRPQ010000000
VERSION     DASRPQ010002323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1948)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1948)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1948
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3740879"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..666)
                     /locus_tag="VFD73_26275"
     CDS             complement(<1..666)
                     /locus_tag="VFD73_26275"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI77486.1"
                     /translation="MPDSLDREPHGKHQSKKAAASGWIGSALEYYDFFIYATAAGLLF
                     PQLFFPSDNPTVGIIASLATFGVGYVARPVGAVVLGHWGDTHGRKRVLILCMFLMGFS
                     TMAVGLLPTYQQVGILAPVLLVILRLIQGFAVAGEISGASSMILEHAPFGRRGYFASF
                     TLQGVQAGQLLAAAVFLPLAQFMPKDQFSSWGWRIPFLLSVVVIIAGYIIRREVDETP
                     AFTE"
     gene            880..1719
                     /locus_tag="VFD73_26280"
     CDS             880..1719
                     /locus_tag="VFD73_26280"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HZI77487.1"
                     /translation="MISDPDLGERASAQVPSKMEAVPDPRQDEVEGAARELVSARLTG
                     RRLARLPAAYPPHDFEAALQAQRVVGALLQERIAGWKCALPPPGKMIIAPIYGSVIAD
                     GPRWRLPVPGHKARLEPEVALVLAYDLPARDWPYEEAEVRAAVGSVRLALELLDCRYA
                     DPAEVSFTELLADGLFNAGLFLGPEVPGGLASELGEVAITLEVDRTPAQHLDGRHPDG
                     DPVRPLHWLANTLRERGEGLQRGQVIITGSYAGVLEVPSDARLRIEFGELGSIAVQLS
                     AEE"
     gene            1724..>1948
                     /locus_tag="VFD73_26285"
     CDS             1724..>1948
                     /locus_tag="VFD73_26285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ureidoglycolate lyase"
                     /protein_id="HZI77488.1"
                     /translation="MRLVRYGERGQERPGVLDSQGLLRDLSGVVRDIDGAALMPDSLD
                     RLRALDLSRLPEVPGPVRLGACVGNVRAIVC"
BASE COUNT          359 a          611 c          636 g          342 t
ORIGIN      
        1 ctcggtaaag gccggggtct cgtcgacttc ccgacggata atgtaacccg cgatgattac
       61 gacgacgctg agcaggaatg gaatccgcca gccccaggag ctgaactggt ccttgggcat
      121 gaactgcgca agcggcagga acaccgcggc cgccaagagc tgcccggcct gcaccccttg
      181 gagggtaaag cttgcaaagt agccgcgccg gccgaacggt gcatgttcga gaatcatcga
      241 actggcgccg gagatctccc ccgcgaccgc aaagccctgg atgaggcgca ggatcacgag
      301 cagcaccgga gccaaaatcc cgacctgctg ataagtcggc aggagtccga ccgccattgt
      361 cgaaaagccc atgaggaaca tgcagaggat cagcaccctc ttacggccgt gggtgtcgcc
      421 ccagtgcccg agaacgacgg cgcccactgg ccgggcgaca tagccgacgc cgaaggtcgc
      481 cagcgatgcg atgattccga ccgttgggtt gtcggacggg aagaagagct gagggaacag
      541 caaccccgcc gcggtcgcgt agatgaagaa gtcataatac tccagagcgg acccaatcca
      601 gccgctggcc gcggctttct tcgactggtg cttgccgtga ggctcacggt ccaaactgtc
      661 aggcatgttg ttcccttcga aacttcttca gccgttcggg ccctcggaac cggatcggcc
      721 ccgggcccga cttcagcaga gctcccgtcc ctaacgagtt aagtacttgc accgttccaa
      781 atcacaagta cattgcaacc cgcaagtcaa gtcaatgaca atattgtgga gcggacagtc
      841 aatgcggcct tcacatgcaa tctggtgctg ggctccaagt tgatttctga tccagacttg
      901 ggggagcgcg cctccgcgca ggtcccctcc aaaatggagg cggttcccga tccgaggcag
      961 gacgaggttg agggggccgc tcgcgagttg gtgtctgccc gtttgacggg tcggcggctc
     1021 gcccgtctgc cagcggccta cccaccccac gatttcgaag ccgcgctgca ggcacaacga
     1081 gtggtcgggg ctctattgca ggagcggatc gccggatgga aatgcgcgct gccgcctccc
     1141 ggcaagatga tcatcgcacc gatctacggt tcagtcattg ccgatggccc acgttggcgc
     1201 cttcctgtcc ccggccataa ggctcgcctc gagccggagg tcgccctcgt tctcgcgtac
     1261 gatctcccag cgcgggattg gccgtatgag gaggcagagg ttcgggccgc cgtgggctcc
     1321 gtacggctcg cacttgaatt gctcgattgc cgctacgccg acccggcgga ggtcagtttc
     1381 accgaattgc tcgccgatgg cctgttcaac gccgggctct tccttggccc ggaggtcccc
     1441 ggcgggttgg cgagcgagct tggggaagtc gcgatcaccc tggaggtgga ccgcacacct
     1501 gcacaacacc tggacgggcg tcacccggac ggcgatccgg tgcgtcccct gcattggctg
     1561 gcaaacacgc tgcgcgagcg gggcgagggt ctgcagcggg gccaggtaat catcaccggt
     1621 tcctatgccg gcgtgctcga ggttccgtcg gatgcccgat tgcggatcga attcggcgag
     1681 cttggctcga tcgcagtcca actctcagcg gaggagtagc agaatgcgcc tggtccgata
     1741 cggcgagcgg ggacaggagc gcccaggtgt cctggactcg caagggttgc tgcgggacct
     1801 gtccggcgtc gtgcgtgaca tcgacggcgc ggcgctcatg ccggacagtc tcgaccggct
     1861 tcgcgcactc gatctgagca ggttgccgga ggtaccgggg ccagtgcggc tgggtgcgtg
     1921 cgttggcaac gtgcgcgcca tcgtctgc
//
LOCUS       DASRPQ010002324         2385 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2177241, whole genome shotgun sequence.
ACCESSION   DASRPQ010002324 DASRPQ010000000
VERSION     DASRPQ010002324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2385
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2177241"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..750)
                     /locus_tag="VFD73_26290"
     CDS             complement(<1..750)
                     /locus_tag="VFD73_26290"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI77489.1"
                     /translation="MTAVLPIKPPGVITQEFLTPKAVRRGIIAGVAGNILEWYDFALF
                     GFFAQQIGTHFFPATDRTASLLAAYGTFAAGFLMRPVGGALFGWVGDRYGRKQALIWS
                     VLAMAFPSFMIGVLPSTETIGLLAPILLLLFRLLQGVAVGGEYMASAVFLVEGSAAGR
                     RGWMGSWGPFGASAGTLLGSAAGAIVNASMSPESVLAYGWRIPFILGLAVGLGGLAIR
                     RHYVERVPHQAPAKSPLGEAFRIHWPTILHLV"
     gene            complement(868..1569)
                     /locus_tag="VFD73_26295"
     CDS             complement(868..1569)
                     /locus_tag="VFD73_26295"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019172 - glyoxalase III activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HZI77490.1"
                     /translation="MSKVLMVLTSHDRLGNTGKKTGFWLEEFANPYYILRDAGFDITL
                     ASPKGGQPPLDPKSDDPASETEATRRFKSDREAQAALARTVRLADVSPDDYDAVFYPG
                     GHGPLWDLSEDRDSIKLIESLYAAGKPVAAVCHGPAAFQRAKSPDGSPLVQGKSVTGF
                     SNTEEAAAGLTDVVPFLVEDMLKEEGGNYSKAADWQPHAVTDGNLITGQNPASSAETA
                     RALQTQLVGAGSISK"
     gene            complement(1613..>2385)
                     /locus_tag="VFD73_26300"
     CDS             complement(1613..>2385)
                     /locus_tag="VFD73_26300"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HZI77491.1"
                     /translation="HQGGIRQSDLSDLFNQDHYLSTEAALRRFSRDSLQVEPGTQVVY
                     SNAGYTLLACAIEGATRQPYDSALAHLVLEPAGMRATRSDNVYEVVLERARYYVVRTA
                     ANTEQWKGLWTAAHLVSTPLDRPANADPVDPSWAIGAGNYLGTPADLVRFGMALTERR
                     LLRGSYRDSSFVEAQLTETQKKSGRALGGWPASSDGVFQMLGSSWNGSFALAIKPSTG
                     VVVAVGSNIEFDQPADLLTRIIDAWSRTAPGQETSPGR"
BASE COUNT          457 a          747 c          761 g          420 t
ORIGIN      
        1 gaccaggtgg aggatggtgg gccagtggat gcggaacgct tcccccagcg gagacttggc
       61 cggcgcctga tggggaactc gttcgacata gtggcgccgg atggcgagcc cgccgagacc
      121 gaccgccaga ccgagtatga agggaatgcg ccagccgtag gccagcaccg attcgggtga
      181 catactggca ttgacgatgg cgccggcagc ggagccgagc agcgttccag ccgacgcacc
      241 gaacggaccc cagcttccca tccaaccacg ccggcccgcg gcagagcctt ccaccagaaa
      301 gaccgccgag gccatgtact caccgccgac ggcgacgccc tgcagcaggc ggaacagcag
      361 gagaaggatc ggagccagca ggccgatcgt ctcggtactg ggcagcactc cgatcataaa
      421 cgacggaaac gccatcgcca gaaccgacca gatcagcgcc tgcttgcggc cgtatcgatc
      481 tcccacccag ccaaagagcg ctcctcccac gggacgcatg aggaaccccg cggcaaaggt
      541 tccgtacgcg gcgaggagtg acgcggtccg gtcggttgcg ggaaagaagt gggtcccgat
      601 ctgctgggcg aagaacccga acagcgcgaa gtcgtaccac tcgaggatat tgccggccac
      661 accggcaatg attccgcggc gaacggcttt gggagtgagg aactcctggg tgatcacccc
      721 gggcggcttg atcgggagga ccgcagtcat gagagcctgg cgttgagaga tgggagatgg
      781 tacagatggc aagttactcg cgccagaggc ccccgtccgg tgaagagcgt gctaggctgg
      841 acgagggccc cgattcggag gaggacgcta cttcgagatt gaaccagcgc cgaccagctg
      901 cgtttgcagc gctctggccg tttcggcgga cgaggccggg ttctgcccgg tgatcaggtt
      961 gccgtcggtc acggcgtgcg gctgccagtc cgccgccttc gagtaattac cgccctcttc
     1021 cttcagcatg tcttccacca gaaatgggac gacatcggtc agccccgctg ccgcctcttc
     1081 ggtgttgctg aatccagtga cggacttccc ctggaccaaa ggagagccat cgggactctt
     1141 ggcgcgctgg aaagcagcgg gtccatgaca gaccgccgcc accggctttc ctgcggcata
     1201 caagctctcg atcagcttga tggaatcacg gtcctccgag aggtcccaga gcggtccgtg
     1261 gccgccgggg taaaagactg cgtcgtagtc gtcgggtgag acatctgcca gccgtaccgt
     1321 gcgggccagc gccgcctggg cctcccggtc actcttgaag cgccgggtcg cttcggtttc
     1381 cgatgcgggg tcatcgctct tggggtcgag cggcggctgc cctcctttgg gtgacgccag
     1441 ggtgatatcg aaccctgcat ctctgagtat gtagtagggg ttggcaaact cctccagcca
     1501 gaacccagtc ttcttgccgg tgtttcccag ccgatcgtgt gaagtgagga ccatcaggac
     1561 tttgctcata ttgtgcctcc gcgaaatcgt tcgattcgta gcctcgcgga atctaacgcc
     1621 ctggggaggt ctcctgccct ggtgcagttc tcgaccatgc atcgatgatc cgagtcagta
     1681 gatcggcagg ctgatcgaac tcaatgttag accccacggc cacgacgacc ccagtggacg
     1741 gcttgattgc tagagcgaac gagccgttcc agctgctccc taacatctgg aaaaccccgt
     1801 cgctgctcgc cggccaaccg cccagggctc gcccgctctt cttctgcgtt tcggtcagct
     1861 gggcttcgac aaacgagctg tcccgataac tgccgcggag cagacggcgc tcggtgagcg
     1921 ccatcccaaa ccgcacgaga tccgccggag tgccgagata attgccggcg ccaatggccc
     1981 aactgggatc gactggatcg gcattggccg gccggtccag gggcgtactt acgaggtgcg
     2041 ccgcggtcca gaggcccttc cactgctcgg tattggcagc agtgcgaacg acatagtagc
     2101 gagccctttc cagtacgacc tcgtacacgt tatccgatcg ggtagcccgc atccctgccg
     2161 gctcgagcac gagatgcgcc agcgctgagt catagggctg cctggttgcg ccttcgatcg
     2221 cgcaggccag gagggtatat cctgcattcg agtagaccac ctgtgtgccg ggttcgacct
     2281 ggagcgaatc tcgcgagaac cgacgcagcg ccgcttcggt agataggtaa tgatcctgat
     2341 tgaagagatc ggagagatcc gattggcgga tcccgccctg atgcg
//
LOCUS       DASRPQ010002325         1653 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_277899, whole genome shotgun sequence.
ACCESSION   DASRPQ010002325 DASRPQ010000000
VERSION     DASRPQ010002325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277899"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..531)
                     /locus_tag="VFD73_26305"
     CDS             complement(<1..531)
                     /locus_tag="VFD73_26305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77492.1"
                     /translation="MRNPSDTINSHITDMLALEEHIEKAVAGQIQALGDQPRAGADLE
                     TVHRWVRIHITNLKQLMGSRGAGMASGAIKRAGSSVLGRAAGAIDLLRSEGDPKNLRD
                     DYTAFSLAAIGYVMLNTTALALEDKEVADLAAQHLQNYVTGMIALHYIIPAVVMRSLQ
                     DEGYPTREDVVTDVFRN"
     gene            complement(633..875)
                     /locus_tag="VFD73_26310"
     CDS             complement(633..875)
                     /locus_tag="VFD73_26310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77493.1"
                     /translation="MSSYKVEQCRIHYRGRDFHFVSYDGHPANERRAELAAPPMWYLM
                     GPGRRWPVMPQVPGQPVTELEQALIAWLQEQDLGRP"
     gene            complement(1013..1477)
                     /locus_tag="VFD73_26315"
     CDS             complement(1013..1477)
                     /locus_tag="VFD73_26315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77494.1"
                     /translation="MGRFVFFCCAGMLVACGKTEVKPARDTTAVAPATPETGPAISLA
                     DIAGKWRLRTTDKAGGNAVESELTATADTSGWTVTRPNHKTVPVRVVAVQGDSIVTEA
                     AYESALRKGVPVRARMVLRLQNGKLVGTTEARYTLSRGDSVAQRPTEGTRER"
BASE COUNT          301 a          533 c          499 g          320 t
ORIGIN      
        1 gttccggaac acgtcggtga caacgtcctc gcgagtcggg tatccctcgt cttgaagaga
       61 ccgcatcacc accgccggga tgatgtaatg caacgcgatc atcccggtga cgtaattctg
      121 cagatgctgg gctgcgagat cggctacttc cttgtcttcc agcgcgagcg ctgtcgtgtt
      181 cagcatgaca tagccgatgg cagccaagct gaatgcggtg taatcgtcac gcaggttctt
      241 ggggtcacct tctgaacgga ggaggtcgat ggcccccgcg gcccgtccga ggacgctgga
      301 acccgcccgt ttgattgccc cgctggccat gcccgcgccc cgagatccca tcagctgctt
      361 caggtttgtg atatgaattc ggacccagcg atgcaccgtc tccagatctg ccccggctcg
      421 gggttgatct cccaaggcct ggatctggcc cgcaacagcc ttctcgatat gctcctcgag
      481 ggcaagcatg tcggtgatat ggctgttgat ggtgtctgat ggattgcgca ctacgcctcc
      541 cggaagccag gaatccaggt acaaacttgg gcctcggcgt atgaagaaat cgtgagccgc
      601 gatggaaagt atcgtgagcc ggtgcctaga ccttagggtc gtcccaggtc ttgctcctgt
      661 agccaggcga tcaacgcttg ctccagctcg gtcaccggct gcccggggac ctggggcatc
      721 accggccagc gccggccggg gcccatgaga taccacatgg gcggagccgc cagctcagcc
      781 cggcgctcgt tggccggatg cccgtcgtag gagacgaagt gaaaatcgcg accgcgatag
      841 tggatgcggc actgttcgac tttataggag ctcacagaag gctcgagaat cgggcgcgcg
      901 cgccaagcgg tgggtgcacg cgcgctgagc ggaccaccgg atgcggagac gtccgcacgg
      961 gctaaatcta caccgcccgg cgccgggctc cgagatcagc agcggcgcgt tcttaccgct
     1021 cgcgcgtgcc ctctgtggga cgctgcgcca ccgagtcgcc ccggctcagt gtgtagcgtg
     1081 cctcggtggt gcccaccaac ttgccgttct ggagccggag caccatgcgg gcccggactg
     1141 gaacaccctt gcggagagcg ctctcgtacg cggcttcggt gacgatgctg tcaccctgga
     1201 ctgcgacgac acgaaccggc accgtcttgt gattcggccg agtcaccgtc caacccgagg
     1261 tgtccgccgt ggcggtgagc tccgactcta ccgcgtttcc accggcctta tccgtcgtcc
     1321 gcagtctcca cttgccggca atatcggcga gcgaaatcgc gggtccggtc tcgggcgttg
     1381 caggagccac agccgttgtg tctcgagcgg gtttgacctc ggttttcccg caggccacca
     1441 acatgcctgc gcagcagaag aagacgaaac gccccatgat aacctccggt gttcgcagtc
     1501 ccagatctac ccgacgttgc tcagttccac accgagaacc aattcgcttc gtcatgtcac
     1561 tgtctctccc agcgaataac aaacagaccg aggacctcgt ctacatcgcg ttctccacct
     1621 cctgtttacg agagtatccg ctgtacgaca aag
//
LOCUS       DASRPQ010002326         1059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2178337, whole genome shotgun sequence.
ACCESSION   DASRPQ010002326 DASRPQ010000000
VERSION     DASRPQ010002326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2178337"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..947
                     /locus_tag="VFD73_26320"
     CDS             <1..947
                     /locus_tag="VFD73_26320"
                     /inference="COORDINATES: protein motif:HMM:NF027666.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sulfatase/phosphatase domain-containing protein"
                     /protein_id="HZI77495.1"
                     /translation="HEPHRPYPLTGVPHPHGNAGSVVSPYLVDTPETRADIARYYDAI
                     SRMDEKIGRMLAELDRRKLRDRTLIVFLSDNGAPFPREKGTLYDSGTRTPLLFSWSPV
                     IPAGRVYDKSALSTVDLAPTLLEIAGATPPRGMQGQSFSRLLTRPDSFAARDYVFSER
                     NWHDCDEHQRAVRTMRYKLIRTNAYTELPLCTAADLGASPSFISLRARAKTGRLTLAQ
                     RRLFEAPRARLELYDLRSDPWEIRNVADDPRYAKEVRSLAQTLEDWIEGSDDFPATYR
                     IRDDNTDRITGVQFTTKIPPLRNADVPPPSERWGRQGP"
BASE COUNT          194 a          349 c          344 g          172 t
ORIGIN      
        1 ttcatgagcc gcatcggccc tacccgctga ccggcgtgcc ccacccgcac gggaatgcgg
       61 gatccgtcgt gtcgccctac ctggtcgaca ccccggagac ccgggccgac atcgcccggt
      121 actacgatgc catttcccgg atggatgaaa agatcgggcg gatgctggcg gagctggacc
      181 ggagaaagct cagagaccgg accctcatcg tgtttctcag cgacaacggc gctccctttc
      241 cccgggagaa ggggactctg tacgactccg gcactcgcac tccgctgctc ttctcctggt
      301 ctcccgtcat ccctgccggg cgggtttacg acaagagcgc cctgagcact gtggacctgg
      361 cgccgacgct gctcgagatc gccggcgcga ctccgcccag gggaatgcag ggacagagct
      421 tcagccggct gctcacccgg ccggattcgt tcgctgctcg agactatgtg ttcagcgagc
      481 gcaactggca cgattgcgac gagcatcagc gagcggtgcg gaccatgcgt tacaagctga
      541 tccgcaccaa tgcctacacc gagctgccgc tctgcacggc ggcggatctg ggagcgagcc
      601 catcgttcat atcgttgcgc gcgcgggcca agacggggcg gctgacgctg gcgcagcgga
      661 ggctgttcga ggcccctcgg gcgcggctcg agctgtacga tctcaggagt gatccgtggg
      721 agatccggaa cgtggcggac gacccccgtt acgcgaagga agtgcgcagc ctggcgcaga
      781 cgctggaaga ctggatcgag gggtccgacg acttccccgc gacctatcga atccgcgacg
      841 acaacaccga ccgcattacc ggcgtccagt tcaccaccaa gattccgccg ctgcgaaacg
      901 ccgacgtccc cccaccgagc gagcgctggg gccgtcaagg gccgtaggct caccacggag
      961 gcacggaggg aacggagggt tgcacggaca gcgcctcaaa gatctcgaca gaatgttttt
     1021 gggggtgggt ggtggggaac cacctttgtt ttactccac
//
LOCUS       DASRPQ010002327         1006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3441245, whole genome shotgun sequence.
ACCESSION   DASRPQ010002327 DASRPQ010000000
VERSION     DASRPQ010002327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3441245"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..973)
                     /locus_tag="VFD73_26325"
     CDS             complement(<1..973)
                     /locus_tag="VFD73_26325"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HZI77496.1"
                     /translation="MVVTKGLQQRERVKARLEHALATEFPNVVGRVYPLELGPPVGWP
                     LQYRVSGPEPGQVRAIAFKVAEEIGSTPGAENVNYNWMEPARTLRIQVDQDQARLLGL
                     SSKELATAVNTVLSGMTATQVRSGIYLVDVLVRASADQRMSLSTIRTLQVALPNGKSV
                     PLSQIASVDYGQEYPIVWRRNRQPTVTVQADVVPGTQAATVVQALAPKIAALSASLPS
                     GYHIGIGGTVEESNKAQVSVAAALPLMLILILTVLMIQLQSFNSIFLVLSVAPLGLIG
                     VVGALLLSHKPLGFVAILGVLALTGMIARNSVILLDQVEKEKADGRHP"
BASE COUNT          177 a          330 c          324 g          175 t
ORIGIN      
        1 aggggtggcg cccatccgcc ttctctttct cgacctggtc gagaaggatg accgagttgc
       61 gggcgatcat gccggtgagc gcgagcaccc caaggatcgc cacgaagccc aagggcttat
      121 gggagagcag gagggcgccg acgaccccga tcagacccag aggggccacg ctgagcacca
      181 ggaagatgct gttgaagctc tggagctgaa tcatcagtac cgtgaggatc agaatgagca
      241 tcaatggcag agcggcggcg accgacacct gcgccttgtt gctttcctcg actgtgccgc
      301 caataccgat atggtacccg ctcggcaggc tggcacttag tgccgcgatc ttcggcgcca
      361 atgcctgcac gaccgtggcg gcctgcgtgc cggggacgac gtcggcctgc acagtcactg
      421 tgggctgccg gttccggcgc cagacaatcg gatattcctg gccgtagtcg acagaggcga
      481 tctggctcag cggaacggat ttcccgttcg gcagcgcaac ctgcagcgta cggatcgtcg
      541 acaaagacat ccgctggtcg gccgacgccc ggaccagtac atcgacgaga tagatcccgc
      601 tgcgtacctg ggtggcggtc atgccggata ggaccgtgtt cacggccgtg gccagctcct
      661 tcgagctcag ccccaggagg cgggcctggt cctggtcgac ttggatcctg agcgtgcgcg
      721 ccggctccat ccagttgtag ttgacgttct ctgcaccggg ggttgacccg atctcctccg
      781 cgactttgaa cgcgatcgcg cgcacctggc ccggctccgg tccgctcacc cggtattgga
      841 gcggccaccc taccggcggg ccgagctcca gcggatagac ccgcccgaca acgttcggga
      901 actcggtcgc cagcgcgtgc tccagcctcg ccttcacccg ctcgcgctgc tgcaggcctt
      961 tggtgacgac cacggcctgg ccgaaaaagt cattgggcag ctgaac
//
LOCUS       DASRPQ010002328         1013 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2178481, whole genome shotgun sequence.
ACCESSION   DASRPQ010002328 DASRPQ010000000
VERSION     DASRPQ010002328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2178481"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..872)
                     /locus_tag="VFD73_26330"
     CDS             complement(<1..872)
                     /locus_tag="VFD73_26330"
                     /inference="COORDINATES: protein motif:HMM:NF014741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF222 domain-containing protein"
                     /protein_id="HZI77497.1"
                     /translation="MDKLRAAIEEFVRSDEVVDPRELRSLIDRLEGKFAQVVRQASQR
                     GDHLAGGHCSAVSWLMDSCTMSQSSASERLLVGKRLEGLPAIGEALSSGQIGYQSASV
                     ICRLSEQLGEKGVALDEAEWIGYARKFSIKDMNDLATHTRYVVDPDGFDRETEENYEE
                     RYLYIKEMKGMFHLEGVMDPEGGAALKTAIDALAKRLDGDDRRTPKQLRADALTELTQ
                     HALDAGTLPRRNRVRPHITVTTTLEGLKGELGAAASELQPGMLVSSKTVQRLACDGTL
                     CRVLKADSQVIDVGR"
BASE COUNT          161 a          372 c          296 g          184 t
ORIGIN      
        1 cgaccgacgt cgatcacctg ggagtccgcc ttgagcaccc ggcacagcgt tccgtcgcag
       61 gccagccgct gaacggtctt gctggagacc agcatgcccg gctggagctc tgaggccgca
      121 gcgcccagct ctcccttcaa gccttccagc gtggtcgtca ccgtgatgtg gggccggacc
      181 cggttgcgcc ggggcagcgt gcccgcgtcc agggcgtgct gggtcagctc ggtcagggcg
      241 tcggcccgca gctgcttggg cgtccgccgg tcgtccccgt ccaggcgctt ggccagggcg
      301 tcgatcgccg tcttcagcgc cgccccgcct tcggggtcca tcacgccttc gaggtggaac
      361 atccccttca tctctttgat gtagaggtag cgctcctcgt agttctcctc ggtctcccgg
      421 tcaaacccgt cggggtcgac cacgtatcgc gtgtgggtgg cgaggtcgtt catgtccttg
      481 atcgagaact tgcgcgcgta gccgatccac tccgcctcgt ccagcgccac gcctttctcg
      541 cccagctgct cgctcagccg gcagatcacc gaggccgact ggtagccgat ctggcctgag
      601 ctcagcgcct caccaatcgc gggcagccct tccagccgct tgccgaccag caggcgctcg
      661 gaggccgagc tctgcgacat ggtgcagctg tccatcagcc aggagacggc gctgcagtgg
      721 ccacccgcca ggtggtctcc ccgctgggaa gcctggcgca cgacctgggc gaacttgccc
      781 tccaggcggt cgatcagcga gcggagctcc ctggggtcta caacctcgtc agagcggaca
      841 aactcctcga tcgcggcgcg gagcttgtcc ataccaatat tgtatcaaac aaaagttcgc
      901 tgtcaagcca ttaacacgaa aatctcaact cacccagccc gccaacgagc aacccaagcc
      961 ctcccctgac acccccttca cagcccttcc gttacgcctt aaactcgccc cgt
//
LOCUS       DASRPQ010002329         2238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4666266, whole genome shotgun sequence.
ACCESSION   DASRPQ010002329 DASRPQ010000000
VERSION     DASRPQ010002329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2238
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4666266"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..629)
                     /locus_tag="VFD73_26335"
     CDS             complement(<1..629)
                     /locus_tag="VFD73_26335"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HZI77498.1"
                     /translation="MTLLAFAIIYFVWGSTFLAIRIGVAEVPPFLLAAMRFFTAGLLL
                     YLWAISRGDPSPNRRQWSSVALLAVLIFIMDYGLLFWAEQRVPSGVAAVMMALIPAFT
                     ALSEIIILGTQRLTLRLALALIIGIAGVAVLMSRSLNLGGTPIDRLGASALIVAALGW
                     SVASALARKVPLPSSKVMSSGAQMLSGGVFLGIASAALGEFRGFHPAAVS"
     gene            1001..1909
                     /locus_tag="VFD73_26340"
     CDS             1001..1909
                     /locus_tag="VFD73_26340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77499.1"
                     /translation="MSTRAPLLAVFLFAVLGCEGADRVSSPASDLDPAPSFAASRFAG
                     IPFGTTAQPISLFGPTYTGGLINPVYPDSLLSYLAAIKAAKGRVVLSLPGGPGGYTNA
                     DGTFNLDKWKTRVSRYNVVNFDSYINDGTIIGNYIIDQPNCSSCWGGVSISADVVEAM
                     AQYSKSIWPNMATIARADPTWLATYAGQYSSLDAGWAQYVMRKGDANTYLSDNVAAAQ
                     SKGLRLIVGLNVLKGGLNETSLTATQVKDFGSIMLSSSYSCAFISWQYNAAYFSQSDI
                     TLAMSTLSKKAARHVASSCSRAATAP"
BASE COUNT          467 a          712 c          679 g          380 t
ORIGIN      
        1 gagacggcgg cggggtgaaa cccacgaaac tcgccgaggg ccgctgacgc tataccgaga
       61 aacacgcccc cgctcagcat ctgtgcaccc gagctcatca ccttcgacga tggcagcggg
      121 accttgcggg caagcgcgga ggccaccgac catcccagcg cagccacgat caacgccgag
      181 gcacccagtc ggtcgatcgg cgtcccaccg aggttgagtg accggctcat caacacggcg
      241 acacccgcaa tgccgatgat cagcgccagg gcgagtcgaa gggtgagccg ttgtgtgccg
      301 agaatgatga tttcagacag cgcggtaaac gctggaatca gagccatcat caccgctgcc
      361 acgccggagg gtacccgctg ctcggcccag aacagcaagc cgtaatccat tatgaagatc
      421 aggacggcca acagtgccac agaggaccac tgcctgcggt tgggagaggg atcgccccgg
      481 ctgatcgccc agagatagag cagcaggcca gcggtaaaga accgcattgc cgcgaggaga
      541 aacggcggca cctcggcgac gccgatccgg atcgccagaa aggtggaacc ccagacgaag
      601 taaatgatgg cgaaggcgag cagggtcatg gtcagtcgtc agtcgtcagt cgtcagtcct
      661 cagtcgtcag gtcgtcagtg agcaggagct tgccccgaac tgacactgaa gagctcgtgt
      721 caacgcccac agcgctgatg cctgacgtct gacgactgac gactgacgtc tgaggtctga
      781 cgactaccgc cccttgcctg ccggtgtcca actacccaca tttttgccgc ctcagctcgc
      841 cagacttcag ttttgcgaga gccaactaca acatcgctgt ccgtcccgac tagcacatcg
      901 agcagccgcc cggagcggcg gctattgcag acttggatga gcagcagaag ccaggagcca
      961 aacaccgatg atccgcaccc gacgtgaggc tggacacctc atgagcaccc gagcgccatt
     1021 gctcgctgtc tttctgttcg ccgttctcgg ctgtgaggga gccgatcgcg tcagctcccc
     1081 cgcgagcgac ctggatccgg cgccttcgtt tgccgcgagc agattcgccg gcatcccatt
     1141 cggaacgacc gctcagccga tcagcctttt cggaccgacc tacaccggcg gcctgatcaa
     1201 cccggtgtac ccggactcac tgctgtccta cctcgcggcg atcaaggccg ccaagggtcg
     1261 ggtggtccta tctctccccg gcggccccgg cgggtacacg aacgccgacg ggacgttcaa
     1321 cctggacaag tggaagaccc gggtctcgcg gtacaacgtg gtcaacttcg attcctacat
     1381 caatgacggc accatcatcg gcaactacat catcgaccag cccaactgct cctcgtgctg
     1441 gggcggagtc tcaatttctg ccgatgtggt ggaggcaatg gcgcagtaca gcaagtccat
     1501 ttggcccaac atggcgacta tcgcgcgtgc cgatccgaca tggctcgcga cctatgcggg
     1561 tcagtacagc tcgctggatg caggctgggc ccagtacgtc atgcggaagg gcgacgccaa
     1621 cacgtacctg tctgacaacg tggcggcggc tcagtcgaag ggcctccgct tgattgttgg
     1681 actgaacgtg ctcaaaggtg gtctgaacga aaccagcctc acggcgacgc aggtcaaaga
     1741 cttcggatcg atcatgctca gcagctcgta ttcctgcgcg ttcatctcct ggcagtacaa
     1801 cgctgcctac ttctcccaga gcgatatcac gttggcgatg agtacgctga gcaagaaggc
     1861 cgcccgccac gtggccagct cttgctcgag ggccgcaaca gcgccctgac cgagtccagc
     1921 gatccgtcgt ttggtgcggg ggtgaggcag agaacactgg ccagcaggtc atagatgtgg
     1981 atgtttcgga acgctgggat cacggcaccc cgctcgaagt cgggtcctcg agccagaaag
     2041 atggcccgca tcgagggaat gtccggaggg tagccgtgca ttccccggag caggcggcct
     2101 ccgcgtgcag cgacggcggc atgggtcgta accatccaac cctcatcggc caccccaatg
     2161 aaggcggcga ttctggggtt gccgcgataa tgaagtgccg ccgggatgtt ctcctttcgg
     2221 tagaccttga gatgcggc
//
LOCUS       DASRPQ010002330         1021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1547901, whole genome shotgun sequence.
ACCESSION   DASRPQ010002330 DASRPQ010000000
VERSION     DASRPQ010002330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1547901"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            295..1020
                     /locus_tag="VFD73_26345"
     CDS             295..1020
                     /locus_tag="VFD73_26345"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HZI77500.1"
                     /translation="MTVSRRPSWLRHTWRSLVLFATAATLGVAMAVPAVSQTWAPAPA
                     PVVSGGAPGMHAPPASPIKHIVVLYMENHTFDNLLGFWCDSHPQRCPDGGMPSLVRLS
                     DGAVVTPRTSPDVVPNVMHETNDQVHAINGGAMNGWELIRGCQAAQRYRCITGYQPQQ
                     EPNLIQLVQHFAMSDMAFSMQDSPSWFGHMYAVAATTDGFTGHNPGINNGPGAGWGCD
                     SGKTGTWVSGGRSKRVPSCIPDP"
BASE COUNT          176 a          331 c          336 g          178 t
ORIGIN      
        1 ccccgagtgc gggcggcgcc ctgcctgttg tctcgcactg ggtcgggtcg gcctggggga
       61 tccaccctgc gagccccaca gatccatgcg taacagttca agaagctcct caccaagctg
      121 gaccgtcaga ttcccgccca actggcctgt ctccgacgcc aggagaaaat tcgggcaaag
      181 ctcgctttgg gccgtcttgc ccgtgcgtac cgtgtgctac acccaccatc tcgtctggtg
      241 acgcgcttgg ggaccggggc ttagagcgag aaatctgaca ggggggccaa actcatgacc
      301 gtcagccgcc ggccatcctg gctgcgacac acctggcgat ctctggtcct gttcgcgaca
      361 gcggccacgt tgggtgtggc catggccgtc cctgctgttt cccagacgtg ggcacctgcg
      421 ccggcgcctg tggtgagcgg cggcgcgcct gggatgcacg cgccaccggc cagcccgatc
      481 aagcacatcg tggtgctcta tatggaaaac cacacgtttg acaacctgct cggcttctgg
      541 tgcgacagtc accctcagcg ctgcccggac ggggggatgc cgtcgttggt ccggctgtcg
      601 gatggcgccg tggtgacacc gcgtaccagc ccggatgtgg tgcccaacgt gatgcacgag
      661 acaaacgatc aggtacacgc catcaatggc ggcgccatga acggctggga gctgatccgt
      721 ggctgccagg ccgcgcagcg gtaccggtgc atcaccggtt accagccgca gcaggagccg
      781 aacctgatcc agctggttca gcatttcgcg atgagcgaca tggcgttctc catgcaggac
      841 agcccgtcct ggttcgggca catgtacgcc gtcgctgcaa cgaccgatgg gttcacgggc
      901 cacaatccag ggattaacaa cggcccaggg gcgggatggg gttgcgactc ggggaagacc
      961 ggcacgtggg tgagcggtgg ccggtcgaag cgcgtgccgt cgtgcatacc cgacccttag
     1021 c
//
LOCUS       DASRPQ010002331         1012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_280220, whole genome shotgun sequence.
ACCESSION   DASRPQ010002331 DASRPQ010000000
VERSION     DASRPQ010002331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_280220"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(208..537)
                     /locus_tag="VFD73_26350"
     CDS             complement(208..537)
                     /locus_tag="VFD73_26350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77501.1"
                     /translation="MRARLTIGTAAGVLLLCLGGFLLRDHGLASTPREAAATYADSVV
                     SGTNGMTHLNAMSVIEASADSATAKLTWSKPDGRLDQIVIVKHRREWGGLRQGWELDL
                     SGSSSAR"
BASE COUNT          164 a          311 c          362 g          175 t
ORIGIN      
        1 gtcagtttgg tgctcgtgat ggcggggctc ctggcggaga tgctgcccac gtgccggggt
       61 gaccttgagg agatcttcgc caacgtggcg gcaagacgga gcggtcggat caaaaagccc
      121 ctgggccgac agcgcgaaac aaagtctcgc cagtcctaga gctcacgggc cgcctcgggg
      181 cggcacttgg tgcagcggag gaaactccta cctggccgaa ctgctaccgg agagatccag
      241 ctcccagccc tgccgcaggc caccccattc gcgtcggtgt ttgacgatca cgatctggtc
      301 caacctgcca tctggcttgg accaggtcag tttggctgtt gcgctgtcag cactggcttc
      361 aatgacagac atggcgttca ggtgcgtcat gccgttggtg ccggagacaa cggagtcggc
      421 gtaggtggct gccgcttctc ggggagtgga cgccagaccg tgatcgcgca gcaggaatcc
      481 cccgagacaa aggagtaaga cgccggcagc agtcccgatc gtcagtcgag cccgcacccc
      541 aagtggcatg gcgccatgat ggcatccgcg cgcaaccgtc gttcatcgaa tggggatctg
      601 gcgagtcgtc acacgtcaca ttctggtgag tggcagcggg gggaacgtgg tgcgctctcg
      661 cggtgactgt cgtgcgtgag ggccgtccgc ctcaaactga ccggcggaca cgttcgcggt
      721 tgccccaccg accggagcgg ggcgttgggc gggggcgact ccaaggccgg ggccccctgt
      781 gttggggtgg cccgtcgcag tgccccttgt gcccgtatgt gcgtggaccg caaccacacg
      841 gctggggtct ggctggtggg tggctgaggc gggctcctgg gcggacaagc ccgcaggtcg
      901 gcagcgcata cgcaacggtc cgtcaatccg tcgcgaaagc ttcgacggtt cgaatccttc
      961 actgggtgca ggcgccgggc ccggcgtggg tactggcggc gctcggccgc cg
//
LOCUS       DASRPQ010002332         1901 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_582120, whole genome shotgun sequence.
ACCESSION   DASRPQ010002332 DASRPQ010000000
VERSION     DASRPQ010002332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1901
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_582120"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(152..1209)
                     /locus_tag="VFD73_26355"
     CDS             complement(join(152..717,717..1209))
                     /locus_tag="VFD73_26355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553005.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI77502.1"
                     /translation="MRPGIALRPDYDAARLRGLAKAARDAGQSRRLLALAETYDGGSR
                     TRAARVGGVGLQTLRDWVVRFNAHGPGGLIDGKAPGSARKLNESQRQALVNIVESGPM
                     PAIHGVVRWRLKDLTLWIWEEFQISLSETTLSRELRALGYRKLSARPRHYAQKPETLE
                     RFKKGLPATLETIRASLPNDTPIELWWQDEARVGQKNKIARRWARRGTRPHAPHDQRT
                     SSAYIFGAICPQQGKGTALVLPRCDTPAMNLHLAEVAQAVAPGAHGVMLMDRAGWHCA
                     KDLVVPDNLTLVLLPARAPELNPVENIWQFLRENWLSSRVFASYRNIVDHCCDAWNRL
                     IDQPWLIMSIGLRDWANA"
BASE COUNT          313 a          622 c          602 g          364 t
ORIGIN      
        1 tggcgcggcg catcctcatg aatcgtggcg gtctcttcga accgcctcgc cgacgagcgc
       61 ccacgttgag gattcaagct gccgctggct cacgatcacg cggcgctgca agcgctgagt
      121 ccgcgggcgt tataccaacc cgcgctgctc ctcatgcatt ggcccagtcc cggaggccga
      181 tggacatgat gagccaaggc tggtcgatga ggcggttcca ggcgtcgcag cagtgatcga
      241 cgatgttgcg gtaggaggcg aacacgcggc tcgacaacca gttctcgcgc agaaactgcc
      301 agatattctc aaccgggttc aattcgggcg ctcgggctgg caggagcacc agcgtgagat
      361 tgtctggcac gacgagatct ttcgcgcagt gccatccggc ccggtccatc agcatgaccc
      421 catgggctcc gggagctacg gcctgcgcga cctcggccaa gtgcaggttc atggcgggcg
      481 tatcgcatcg cggcagcacc agggctgtgc ccttgccctg ttgcgggcag atcgccccga
      541 agatgtaggc cgaactggtt ctctgatcgt gcggggcgtg gggccgggtt ccccgtctgg
      601 cccagcggcg ggcgatcttg ttcttctggc ccacacgcgc ctcgtcctgc caccacagct
      661 ctatgggggt gtcgttcggg aggctcgccc ggatcgtctc caacgtggcg gggagacttt
      721 tttaaaacgc tccagcgtct caggcttctg ggcatagtga cggggacggg ccgagagctt
      781 gcgatagccg agcgcgcgca gttcccggct cagtgtcgtc tcgctgagtg agatctggaa
      841 ctcctcccag atccataggg tcagatcctt taagcgccag cgaaccacgc cgtggatcgc
      901 cggcatcggc ccactctcga cgatgttcac caaggcctgg cgctggctct cattcagctt
      961 gcgagcgctt cccggggcct tgccgtcgat caagccgccg gggccgtggg cgttgaaccg
     1021 cacaacccag tcccgaaggg tctgcagccc gacgccgccg acccgcgccg ccctggtccg
     1081 ggagccaccg tcgtaggtct cggccagcgc cagcagccgc cgactttgac ccgcatcccg
     1141 ggccgctttc gccaagcctc gaagccgggc cgcatcatag tctgggcgaa gcgcaatccc
     1201 tggccgcatg gcgaacctcc tgctcgccac cagggaatct gactcgctcc gctccgaaaa
     1261 ccccagaatg agtcagcctt cacgcgggct ggtatgagcc cgcatttctc acacggatat
     1321 aggcgactgc atttggtgcg gaaatccgat gctggttgag gaggttagcc aatgtccgtg
     1381 agcctgcccc ctgagggctg aaaaacagtc tgtcgaaacg ggtctgcttg gcccgcggcg
     1441 gtcaagctct tgcaccggct cactttttca ctccgaatgg cctccggatc acaaaacgtg
     1501 tgagaaatgc gggctaggat cagtcgtcgc ttggacctgt ccgctggtcg ggcgttttgc
     1561 cctgcttgag cagggcggcg taccgttgag cgacgcgcgg tgggcgagcc tcaagttgct
     1621 ggttgagtct tgtcggccct ggctcgggcg gctctgggtc aggctcaaga aatggcgagg
     1681 gcttgccacc ggctctcaaa cgaccgctgc gccctctatg gatgctctct gccccgccgc
     1741 cacgctcgac cgccgcaagc caagacgggc cttggatcgc cgggggcacc ctcatggacg
     1801 aattcacgcg cttttgacgc caatctcacg ttcgttcgac gcgcgtgaga cactgatcgc
     1861 acgatcgtgc ttcgcgtcgt gggacattcg tccttcgacg c
//
LOCUS       DASRPQ010002333         1010 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_898603, whole genome shotgun sequence.
ACCESSION   DASRPQ010002333 DASRPQ010000000
VERSION     DASRPQ010002333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_898603"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            265..>1010
                     /locus_tag="VFD73_26360"
     CDS             265..>1010
                     /locus_tag="VFD73_26360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77503.1"
                     /translation="MAGRQVFICAAAEDAGYYNELITALNAWEVPHTGMGVVPNPVIS
                     MPPTIESEILQCGVFLRVCTTHTRQSNAVKLATDFFQQVLDKDRRGPSQRRRLVNLIL
                     DSAYLLDDEEKKTLYIMAPGKSRPLWLEELAVSVGAATLTQQISRRALFGMGAGAAVA
                     VASAGVAGTLLVKQYRSQQPPPLPVQQSISGNPKFNFNLIPEPMKDNADDPARVFQDG
                     ATIYAQPVLRYDTFDKLTKVVDDTVYVLTTT"
BASE COUNT          212 a          333 c          291 g          174 t
ORIGIN      
        1 ccacctgcgg ctgggcgagc gctccggcct cgatctcgac gtgcgcccca gtctccaact
       61 ccccttcgcc gccgcgcaat aacccgcaat cagcaaacct cccctgctcc tgctagcgag
      121 ccgcagacga ggagccggta aaattacctc cgcctgtacg tgataatagc ggcgataaca
      181 cgtcggctct tgcgcgctac cccagcaatt gtgtaagata cagcctgaca gtgtaagcgg
      241 tatcgcaagg aggccagaag agcgatggca gggagacagg tcttcatctg cgcggcggcc
      301 gaggacgccg gatactataa cgagcttatc accgcgttga atgcctggga ggtgcctcac
      361 accggaatgg gcgtcgtccc caaccccgtc atcagcatgc cgcccaccat cgagtcggag
      421 atcctccagt gtggcgtgtt cctgcgcgtc tgcacgaccc acacgcgcca gtcgaacgcg
      481 gtcaagcttg ccaccgactt cttccagcag gtgctcgata aggaccgcag gggaccgagt
      541 caacggcgta ggctggtcaa cctcatcctc gattctgcct atctgctcga cgatgaggag
      601 aagaagacac tctacatcat ggctcccggc aagtcgcgtc cgctctggct agaggaactg
      661 gccgtctcgg tcggcgcggc cacgctgacc cagcagatca gcagacgggc gctcttcggc
      721 atgggcgcgg gcgcggcggt ggcggtcgcc tcggcgggcg tcgcggggac gctgctggtc
      781 aagcagtacc gcagccagca accgccgcct ctgccagtgc aacagagtat ttcgggcaac
      841 cccaagttca acttcaacct cattccagag ccaatgaagg acaacgcaga cgatcccgca
      901 cgggtctttc aggatggcgc gaccatctac gcgcagccag ttctccggta tgacacattc
      961 gataaactga cgaaagtggt cgatgacacg gtctatgtgc tcacaaccac
//
LOCUS       DASRPQ010002334         1823 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3442958, whole genome shotgun sequence.
ACCESSION   DASRPQ010002334 DASRPQ010000000
VERSION     DASRPQ010002334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1823
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3442958"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1303)
                     /locus_tag="VFD73_26365"
     CDS             complement(<1..1303)
                     /locus_tag="VFD73_26365"
                     /inference="COORDINATES: protein motif:HMM:NF013591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HZI77504.1"
                     /translation="MTVSLLPPSPSALAKSEWADIAPYFDDLAARELDSDSTEAWLRE
                     WSRLEELVTEAAARAMIAYTVDTSDRAKEADHLRFSTEILPQMEERSVALARKLVETG
                     YTTPALSTTLARFRTQIEIFREENVPIFAALEEHSTRYQRITGSMTAIWDGVERPLPQ
                     LQPFLKSPDRTIRERAFRASSQPYLDKRAELADLFDRMYELRMRAARNAGFANFRDYI
                     FPAKFRFDYTPADCERFHAAVEETVSPAVERVLEFRRQRLGLDRLRPWDLSVDPYREK
                     PLHPFADAAELVSKARRVFDGVNASLGDEFQTMIDEGLLDLESRKGKAPGGYCETLHF
                     NGRPFIFMNAVGVVDDVMTLLHEAGHAFHAFASHPLPLIWQRHPGSEAAELASMSMEF
                     LASPHLLQPVGYFTAAEARSAWLEHLEDVLLSLVHIASVDAF"
     gene            complement(1379..>1823)
                     /locus_tag="VFD73_26370"
     CDS             complement(1379..>1823)
                     /locus_tag="VFD73_26370"
                     /inference="COORDINATES: protein motif:HMM:NF021606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2339 domain-containing protein"
                     /protein_id="HZI77505.1"
                     /translation="AVLAAGLWRRSQSPAGDPFIRGILWSLAGAIALFGVTGEIRRYF
                     ALQPLSAETASLASGLAVSAWWLIFAAALVGLGFQRRLQPARVAGLSVAGLAVIKVLF
                     FDLASLDALYRVGSVFILGLVSLLLAYLYHRQNRAQNGSPREMTS"
BASE COUNT          368 a          547 c          607 g          301 t
ORIGIN      
        1 ggaacgcatc gaccgaagcg atgtgcacca ggctcagcag cacgtcttcc aggtgctcca
       61 gccaggcgct ccgggcttcg gctgctgtga aatacccgac cggctgcagc agatggggtg
      121 atgcgaggaa ctccatggac atcgaggcca gctcggccgc ctcggagccg gggtggcgtt
      181 gccagatgag cggcagggga tgcgaggcga aagcgtggaa tgcgtgccct gcttcgtgga
      241 gcaaggtcat gacatcgtcc accactccaa cggcattcat gaagatgaag ggccggccgt
      301 tgaagtggag tgtctcgcag tagccgccgg gtgccttgcc cttccggctc tccagatcca
      361 atagaccctc gtcgatcatg gtctgaaatt cgtcgccgag cgatgcgttt actccgtcga
      421 aaacccggcg agccttggag accagctccg cggcatcggc gaacgggtgc aggggcttct
      481 cgcgataggg atccaccgac aaatcccagg gccgcagccg atcgagaccg agccgctgtc
      541 gccggaactc caggacccgc tcgactgccg gagagacggt ctcctctacc gcggcgtgga
      601 agcgctcgca atcggccgga gtgtagtcga agcggaactt ggcgggaaag atgtagtcgc
      661 gaaaattggc aaagccggca tttcgcgcgg ctcgcatcct gagctcgtac atccgatcga
      721 acaggtccgc cagctcggca cgcttatcca gatagggctg gctcgaggcc cgaaacgcac
      781 gctcgcgaat ggtccggtcg ggacttttga ggaaaggctg cagctgcggg agtggtcgct
      841 cgaccccgtc ccagattgcg gtcatcgatc cggtgatccg ctgataccgg gtgctgtgct
      901 cctccagcgc agcgaagatg ggaacgttct cttcccgaaa gatctcgatc tgggtgcgaa
      961 accgcgccag ggtcgtcgag agagccggag tggtgtagcc ggtctccacc agcttgcggg
     1021 ccagcgcgac gctccgctcc tccatttgag ggagaatttc ggtggagaat cggaggtggt
     1081 cggcttcctt cgcacgatcg ctggtatcca ccgtgtaggc aatcatggcg cgggcggcag
     1141 cctcggtgac cagctcttcg agccgggacc actctcgaag ccacgcttcg gtgctgtcgg
     1201 agtccagttc gcgggcagca aggtcatcga agtagggggc gatgtcggcc cactcggatt
     1261 tcgccagcgc tgacggggat ggtggcaaca acgacacggt cacaagagct cctgttgaat
     1321 tcggctggtc agatataacg agggccggac ggcagtcaca atgccatctc gcggacaatc
     1381 atgaggtcat ttcccgcgga ctcccgttct gagcgcggtt ctgccggtga tacaggtagg
     1441 ccagcagcag cgagaccagt cccaggatga agacggaccc gactcgatag agcgcatcga
     1501 gcgaggcaag gtcgaagaac agcaccttga tcacggcgag ccccgctacc gagagtccag
     1561 ctacccgtgc cggttgcagg cggcgctgga acccaagacc gacgagggca gccgcaaaga
     1621 tcagccacca ggcactcacc gcaagccccg aggcgaggga agcggtttcg gcggagagcg
     1681 gctgcaacgc gaaatagcgg cggatttctc cggtgacacc gaagagggcg atggcgcccg
     1741 caagactcca gagtattcca cggatgaagg gatcgccggc gggcgattgg cttcgcctcc
     1801 acagtccagc ggcgaggacg gca
//
LOCUS       DASRPQ010002335         1816 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4338911, whole genome shotgun sequence.
ACCESSION   DASRPQ010002335 DASRPQ010000000
VERSION     DASRPQ010002335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4338911"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            120..281
                     /locus_tag="VFD73_26375"
     CDS             120..281
                     /locus_tag="VFD73_26375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77506.1"
                     /translation="MRSLHPELLGAGRVDAALALRGASKGTWFGNILNERVRQRVQTA
                     ITETRSRHS"
     gene            complement(690..1094)
                     /locus_tag="VFD73_26380"
     CDS             complement(690..1094)
                     /locus_tag="VFD73_26380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77507.1"
                     /translation="MSNVNALPIESPNLFSLSGGGLTVSLALSGIDGKPHFSYQDAHQ
                     SQSFSGDEITLEETTLDTLASVTLVRTVDLGDTTFTLLVPRVNLLGAASHVIHTAGIT
                     TMHRTTIAGLGHGQLTTYHVTRLYGSAAQVQF"
BASE COUNT          323 a          503 c          619 g          371 t
ORIGIN      
        1 gtgggaaatc ggatcgagtg atgcacgggt catcatcgtc gcggatctcg tccgtaagcg
       61 agcatatatc gaggtgttca aggtgctggc caaagttccg cgacgtggag gtcgcggtca
      121 tgcgctcgct ccacccggag ctgctgggcg ccggtcgggt ggacgccgcc ctggccctgc
      181 gcggcgctag caagggcacc tggttcggta acatcctgaa cgagagagtc cggcagcggg
      241 tccaaaccgc gatcaccgag acacgctcac gccacagctg aggtgaacgc ggcagggcca
      301 gaagggcatc gatttatggc tgcagggaac cggcatgggc tacgacctgc tctcggccgg
      361 tcggctgcct gaatacgagg cgttctacgt gggcaggcgg cgcctgacgg gacggtgatc
      421 caagagctct gccccttttc tgcagtcgct gaaaccggtg tcgcgatcgg cggccggacg
      481 tcactggata ccggccgccg ggaaacagtc atggagaggg tgaggggtat gagccgggct
      541 gtccggcgag cgcggtgatg tcagcggcgg tgagagcgag gtcgacggcg tactggccga
      601 cgaggcggcg gatcatcagg ggaagtcaaa ggcggtgccg tccgcggcca gtgcggtgat
      661 gaggtggatt cggctttctt gctcgggggc tagaattgca cctgagcggc agacccatat
      721 agccgcgtta catggtaggt ggtcagttgc ccgtgcccca gcccggctat tgtcgtccgg
      781 tgcatggtgg tgatacccgc cgtatggatg acgtgactgg ccgcgccgag gaggttgacc
      841 ctcggcacca gcagcgtaaa tgtagtgtcg ccgaggtcta cggtcctgac gagggtcacg
      901 ctggccaggg tgtcgagtgt agtttcctcg agggtgatct cgtcgccgct gaaactctgt
      961 gattggtggg catcctggta gctgaagtgc ggtttcccgt cgatgccgct gagagctagg
     1021 ctcaccgtga ggccgccacc gctgaggctg aagaggtttg gggattctat cggaagtgca
     1081 tttacgttag acaccactta cctcctagaa gctctcgaca actgggccga cttcttccta
     1141 gtggtccgag atcgccttaa tcacgcttcc tacgtggctt ggcagactat ccaccagact
     1201 gattcagcgg tcgagctgtt gtcaagaccg tggaccaaga tcgtccatct cgccgtccca
     1261 acagaacatc cgatctgcgc gttcattcat ctaactggac tcgatcgtgc cgccctacat
     1321 atcggatatc tgcgcgcact tactctgcac tgtcccaggt cgctgattaa aatactgagt
     1381 tagtcctttg tgaatctttg tatttgcaga ccaccggccg ccgccgtggc ctgcgtaagc
     1441 catgatcggg tctggcgtga tcatcaacca ccgagcgggt caggggcggc gcccgtggct
     1501 aggtattccg gagatcggtg gtgcaaagac tcaggcgcac cgctggagat tgcgctcgct
     1561 cagacgaacg ggtcgatcta tggcaggtct gatgtaatga tgaactgttg gcgtctgcag
     1621 gggtgggctg ggcacgcggc tgagggggtt ggggtgggga tacggaaaag cgttgcgacg
     1681 ctgggtcccg ccgagctgtc ggatttgcgg gatgcattcg cggcagtgta tggcctgcgt
     1741 gatgaccgcg gctacgcctt ctacgccggt ctgcacgggc tgccgctgcc tgagtactgc
     1801 cagcacggca cgctgc
//
LOCUS       DASRPQ010002336         1599 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4338938, whole genome shotgun sequence.
ACCESSION   DASRPQ010002336 DASRPQ010000000
VERSION     DASRPQ010002336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4338938"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1161
                     /locus_tag="VFD73_26385"
     CDS             <1..1161
                     /locus_tag="VFD73_26385"
                     /inference="COORDINATES: protein motif:HMM:NF024825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZI77508.1"
                     /translation="AAAGGGFAQVSVKVGVLNDQSGVYADVGGKGSVIAAEMAVEDFK
                     PAAHGLQVEVVSADHQNKPDIGANIARQWYDRDGVDAILDVPTSSVALGISQLTREKN
                     RIFINAGAGTAELTGAQCSPNTVHWTYDTVALANGTGTALLKRGEDTWFFITADYAFG
                     HALERDTAAVVTKSGGKVLGSVRTPFPASDFSSFLLQAQGSGAKVIGLANAGGDTISA
                     VKQASEFGVTQGGQKLAALLMYETDVHSLGLGVAQGLVLTTAFYWDLNDGTRTFSKRF
                     AEKMGGQMPTMNQAGTYAGLLHYLKAVAATKSKDAQTVMAWMKANPTDDPLFGKGTIR
                     VDGRKIHDMYLFEVKKPAESKGEWDLYKQLATIPGPEVFRPLNEGGCPLVKG"
     gene            complement(1322..>1599)
                     /locus_tag="VFD73_26390"
     CDS             complement(1322..>1599)
                     /locus_tag="VFD73_26390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77509.1"
                     /translation="CPEMTVVVSGQTGVACATVRRLASKRHLILEAPRTGREAEVIRW
                     LSLRAPPLRRPTLVLGSFGSPHLPLSAEPRPARSKPRATTSPRPHFG"
BASE COUNT          308 a          487 c          523 g          281 t
ORIGIN      
        1 gccgccgctg gcgggggctt tgcgcaagtt tccgtcaagg ttggcgtgct caacgaccag
       61 tctggcgtct atgccgacgt gggtggaaaa ggctcggtga ttgccgccga gatggctgtc
      121 gaggacttca agcctgccgc acacggcctt caggtcgagg tcgtctcagc cgatcaccag
      181 aacaaacccg atatcggcgc caatatcgcc cggcagtggt atgatcgcga cggggtcgac
      241 gccatcctcg atgtgccaac gtcctcggtg gcgctgggca tcagccaact cacccgcgag
      301 aagaaccgca tcttcatcaa cgcaggcgca gggacggctg agctgaccgg tgcgcaatgc
      361 tcgccgaata ccgtgcattg gacctatgat acggttgccc tcgcgaatgg gacgggcacg
      421 gccctcctga agcgcggtga ggacacctgg ttcttcatca ctgccgacta tgccttcggg
      481 cacgccttgg agcgcgacac ggctgcggtg gtcacgaaaa gcggcggcaa ggttctgggc
      541 tcggtcagga cgcccttccc ggcctcagac ttctcctcgt ttctcctgca ggcccaaggg
      601 tcgggtgcta aggtcatcgg cctcgccaac gccggcggcg acaccatcag tgcggtcaag
      661 caagcgtccg agttcggcgt cacccaaggt gggcagaagc tcgccgcgct tctcatgtat
      721 gagactgacg tccactcact cggtctgggg gtcgcgcaag ggctggtgct cacaacggcg
      781 ttctactggg acctcaacga cgggacgcgc accttctcca agcggttcgc cgagaagatg
      841 ggcgggcaga tgccaaccat gaaccaagcg ggcacctatg cgggcctgct ccactatctg
      901 aaagctgtgg cggcaacgaa atcgaaagat gctcagacgg tgatggcgtg gatgaaagcg
      961 aacccgaccg atgacccgct attcggcaag ggcacgatcc gggttgatgg ccgtaagatc
     1021 cacgatatgt acctcttcga ggtgaagaag ccggcagagt cgaagggtga gtgggatctc
     1081 tacaagcagc tggcgacaat ccccggccct gaggtctttc gaccgctgaa cgagggtgga
     1141 tgcccccttg tcaaaggctg accggagagg ccaacgaggc tcgctggttg cagacctgac
     1201 gtaatcgctg gctgctcagc tgaaagcggg tcgtcagaca ggacggcttc gattggacct
     1261 ctggctgagg gcagcctcag gtcatatcga gccgttaacc gctcaagcgg agcatccggt
     1321 atcagccgaa gtgcggccgt ggcgaggtcg tcgcgcgagg tttggagcgt gctggccgcg
     1381 gctccgcgct cagcggcaag tgcggcgagc caaagctgcc caagacgagc gttggccgcc
     1441 gcagcggtgg agcgcgcaag ctcagccacc ggatgacctc tgcctcccgt ccagtgcgtg
     1501 gtgcctcaag aatgaggtgg cgtttgctgg cgagacgcct gactgtggcg cacgcaactc
     1561 cagtctgccc gctgaccacc acggtcatct cgggacagt
//
LOCUS       DASRPQ010002337         2651 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2459101, whole genome shotgun sequence.
ACCESSION   DASRPQ010002337 DASRPQ010000000
VERSION     DASRPQ010002337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2651
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2459101"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1056
                     /locus_tag="VFD73_26395"
     CDS             <1..1056
                     /locus_tag="VFD73_26395"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HZI77510.1"
                     /translation="TPPGEDGSADLKHVLAVARAVGKNMNEPKIVVTKSTVPVGTAEK
                     VRAAIRSETDIAFSVCSNPEFLKEGAAIEDFMKPDRVVIGVDNEQAKEVMGELYAPFT
                     RQGGNRILFMDIASAEVTKYAANAMLATRISFMNQMALFCELVGADVNHVRLGIGSDQ
                     RIGRAFLYPGPGYGGSCFPKDVKALIRTSEDLGLSLDVLKAVEQVNECQKQVVLQKTL
                     RHLGQDLSGKSIGIWGLAFKAETDDMRESPAIPVIEGLLDAGARVQTHDPKATDSARM
                     IFGDRVMYAADPYSAAHGVDALLVMTEWLVYRNPDFERVRKLVRRPLLVDGRNLYDPE
                     RMAALGFEYHGIGRGRR"
     gene            1053..2018
                     /locus_tag="VFD73_26400"
     CDS             1053..2018
                     /locus_tag="VFD73_26400"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HZI77511.1"
                     /translation="MSRVLVTGAAGFIGSHLVQALVDQGDDVVGIDNFDPFYPREMKE
                     RNLAEVGQGRFDFHELDLLDVPRLRSLLTPETIIVHLAAKAGVRPSLADPVGYAQVNV
                     TGTAAVAEAARQAGVSRLVFGSSSSVYGDSTPVPFREDAVAVVPVSPYAATKRAGELL
                     LEAIAPIYRLRVVSLRFFTVYGPRQRPDLAIHAFTRKMVEGRPLTIFGDGTQARDYTY
                     CDDIIAGVLSAIEWSATAPFRVETFNLGGSRPIPTEAMVTEIAQALGVRPKIEWAPMQ
                     PGDVQRTAADITKAHAVLGYQPQTSFPEGVRRFVHWFREAYVRAD"
     gene            2002..>2651
                     /locus_tag="VFD73_26405"
     CDS             2002..>2651
                     /locus_tag="VFD73_26405"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI77512.1"
                     /translation="MSGQTELLLARARERFVVQDYYGAVHLLESIVDSGRAFADVHHL
                     LGVCLSLLGQPQRALSELERALELNPRYVEALIHRGLVLNELGRTDEAAGAFSDAAGQ
                     LEPSTAGLPGPVAAQLANRHAELADNYALAGALDRAIEQYERALELGPEFHDLRYRMA
                     RVLLDAGRSLEAREALERVVEARPTFVDAEAALGLAHYMSGDAAGARDVWESCLARR"
BASE COUNT          461 a          815 c          864 g          511 t
ORIGIN      
        1 accccacccg gagaggacgg ctcggccgat ctgaagcacg tgctcgccgt cgcgcgtgca
       61 gtcggcaaga acatgaacga gcccaagatc gtggtgacca agtccactgt cccggtcgga
      121 accgcggaaa aggtccgtgc cgcgatccgc tcagagacgg acattgcctt ctcggtgtgc
      181 tccaatccgg agtttctcaa ggaaggggcc gcgatcgagg atttcatgaa gccggaccgg
      241 gtggtcatcg gtgtcgacaa tgagcaggcc aaggaagtga tgggtgagct gtacgccccg
      301 ttcacccgcc agggcgggaa ccgaattctc ttcatggaca tcgcatcggc agaagtcacg
      361 aagtacgcgg ccaatgccat gctggccacc cggatctcat tcatgaacca gatggcgctg
      421 ttctgcgagc tggtgggcgc ggacgtcaac cacgtccgtc tgggaatcgg ctccgaccag
      481 cggatcggcc gggccttcct ttaccccggt ccgggctacg gcggttcctg ctttcccaaa
      541 gacgtcaagg cgttgatccg aacctcggag gacctggggc tctccctcga tgttctcaag
      601 gccgtggagc aggtgaatga gtgtcagaag caggttgtgc tgcagaagac gctccggcac
      661 ctgggtcagg acttgagcgg gaagtcgatc gggatctggg gccttgcctt caaggccgag
      721 acggacgaca tgagagagag tccggccatt cctgttatcg aaggtcttct cgatgccggt
      781 gcccgggtgc aaacccatga ccccaaagcc accgattcgg ctcggatgat ctttggagac
      841 cgcgtcatgt acgctgccga tccctacagt gccgcgcatg gagtcgacgc gctcctggtg
      901 atgaccgaat ggctggtgta ccgcaatccc gacttcgagc gcgtgcgcaa gctggtccgc
      961 cgcccgctgt tggtcgacgg ccggaatctt tacgacccgg agcgcatggc cgcattgggc
     1021 ttcgaatatc acgggattgg tcgaggacgt aggtgagccg cgtcctggtc accggtgcgg
     1081 cggggttcat cggatcacac ctcgtccagg cactggtcga ccagggagat gatgtcgtcg
     1141 ggatcgataa cttcgatccc ttctatcccc gtgagatgaa ggaacgcaac ctggccgagg
     1201 tggggcaggg gcgtttcgac ttccacgaac tcgatctgct ggatgtaccc cggctacgct
     1261 cgctgctcac gccggagacc atcatcgttc acctcgcggc caaagctggg gtgcggcctt
     1321 cgctggccga cccggtgggc tacgcccagg taaacgtcac cggcacggcg gcagtcgccg
     1381 aggccgcacg ccaggcggga gtgtctcgcc tcgtgttcgg gtcctcgtct tcggtctatg
     1441 gggacagcac cccggtgccg ttccgggaag atgcggtggc cgtcgtcccg gtctccccct
     1501 acgccgccac caagcgcgcg ggcgagctgt tgctggaggc gattgctccg atctaccggc
     1561 tccgagtggt atcgctgcgc ttctttaccg tatacgggcc gaggcagcga cccgatctcg
     1621 ccatccatgc cttcaccagg aagatggtcg agggacggcc gctcacgatt ttcggggatg
     1681 gaactcaggc acgcgattac acctactgcg acgatatcat cgccggtgtt ctctctgcca
     1741 tcgagtggtc ggccacggcg ccgttcaggg tcgagacgtt caacctgggc gggagccgac
     1801 ccattccaac cgaagcaatg gtgacggaga ttgctcaggc tttgggtgtt cgaccgaaga
     1861 ttgagtgggc ccccatgcag cccggtgatg ttcaacgaac cgctgccgac atcaccaaag
     1921 ctcacgcggt tctgggttat cagccacaga catcatttcc ggaaggtgtc cgccgctttg
     1981 tccactggtt tcgggaggcg tatgtccggg cagactgagc tcctgctggc gcgagcccgg
     2041 gagcggttcg tagtgcagga ctattacggt gccgtccatc tgctggaaag catcgtcgac
     2101 tcgggacgag cctttgccga cgtccaccat ctgctgggtg tgtgcctctc tttgttgggg
     2161 cagccccagc gcgcgttgag tgagctcgag cgagcgctgg agctgaatcc ccgctatgtc
     2221 gaggccctca ttcaccgagg cctcgtgctc aatgagctgg gccggaccga tgaggcagcg
     2281 ggcgccttct ctgatgccgc ggggcagctc gagccgtcca ccgctggact ccctggaccg
     2341 gtcgccgccc aattggccaa ccgccacgcg gagctggccg acaattatgc cttggccggg
     2401 gcattggatc gggcgatcga gcaatatgag cgcgccctcg aactcggtcc cgagtttcac
     2461 gatctgcgct accggatggc tcgggtcctt cttgatgcgg gtcgctcgtt ggaggcccga
     2521 gaggcgctcg aaagagtggt cgaggctcgc cccaccttcg tggatgcaga ggccgcactg
     2581 ggcttggccc actatatgtc cggagatgcg gcaggggccc gggatgtctg ggaatcctgt
     2641 ctcgcacggc g
//
LOCUS       DASRPQ010002338         2233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4035473, whole genome shotgun sequence.
ACCESSION   DASRPQ010002338 DASRPQ010000000
VERSION     DASRPQ010002338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4035473"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2..1535
                     /locus_tag="VFD73_26410"
     rRNA            2..1535
                     /locus_tag="VFD73_26410"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            1771..1847
                     /locus_tag="VFD73_26415"
     tRNA            1771..1847
                     /locus_tag="VFD73_26415"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1805..1807,aa:Ile,seq:gat)
     gene            1902..1974
                     /locus_tag="VFD73_26420"
     tRNA            1902..1974
                     /locus_tag="VFD73_26420"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1935..1937,aa:Ala,seq:tgc)
     gene            2049..2165
                     /gene="rrf"
                     /locus_tag="VFD73_26425"
     rRNA            2049..2165
                     /gene="rrf"
                     /locus_tag="VFD73_26425"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT          419 a          651 c          762 g          401 t
ORIGIN      
        1 ctgtatggcg agtttgatcc tggctcagga caaacgctgg cggcgtgcgt aacacatgca
       61 agtcggacgg ggggaggctc ttcggggctt tcttcagtgg cggacgggtg cgtaacacgt
      121 ggctaaccta cccttcgcag ggggataccc gccagaaatg gcggctaaga ccgcatacgc
      181 cgcacgggag gcgcgccctc cggtgcggga aaaccagcgt cgcaaggcgg tggtggcgag
      241 ggagggggcc gcggccgatt agctggttgg cggggtaaag gcccaccaag gcgacgatcg
      301 gtagctggtc tgagaggatg atcagccaca ctgggattga gaacggccca gactcctacg
      361 gggggcagca gtgaggaatc ttcggcaatg ggggcaaccc tgaccgagca acgccgcgtg
      421 cgggatgacg gccttcgggt tgtaaaccgc ttttccccgg aacgagcatg cggacggtac
      481 cgggggaaga agcctcggct aactacgtgc cagcagccgc ggtaatacgt aggaggcgag
      541 cgttgtccgg agttactggg cgtaaagggt gcgcaggcgg tggcccgcgt gggcggtgaa
      601 agctcctggc tcaactggga gagggccgtc cagacggggt cacttgagag gcggagaggg
      661 gcgtggaatt ccgggtggag cggtgaaatg cgtagagatc cggaggaaca ccgacggcga
      721 aggcagcgcc ctggccgccg cctgacgctc aggcacgaaa gctgggggag cgaacaggat
      781 tagataccct ggtagtccca gctgtaaacg atgtccaccg ggtgccgggg gtatcgaccc
      841 cctcggtgcc gcagccaacg tgatgagtgg accgcctggg gagtacggcc gcaaggttaa
      901 aactcaaagg aattgacggg ggcccgcaca agcagcggag cgtgtggttt aattcgatgc
      961 gacgcgcaga accttacccg ggcttgacat gcgcctgcac cagccgttat gggctgtccc
     1021 ttcggggcgg gcgcacaggt gctgcatggc tgtcgtcagc tcgtgccgtg aggtgttggg
     1081 ttaagtcccc taacgagcgc aacccctggg gtccgttaca tcccctctcg ggcccgactg
     1141 ccgcgcgcaa cgcggaggaa ggcggggatg acgtcaagtc agcacggccc ttacgtccgg
     1201 ggccacacac acgctacaat ggccggtcca gcgggtcgcg aagccgcgag gcggagccaa
     1261 tcccacaaag ccggtcccag ttcggattgc aggctgcaac ccgcctgcat gaagccggag
     1321 ttgctagtaa ccgcgggtca gcacaccgcg gtgaatacgt tcccgggcct tgtacacacc
     1381 gcccgtcaca ccatggaagc cgacaacacc tgaagccggt gggccaaccg ttcgccttgt
     1441 gcgagtggag gcagctgtcg agggtggggt cggtgactgg ggtgaagtcg taacaaggta
     1501 gccgtaccgg aaggtgcggc tggatcacct cctttctagg gagacctgct tcgatgcgcg
     1561 gcgcttcggc gccacacatc tgaagccact cccaggtcga tcggtggggt ttcacatccc
     1621 gccgttcgcg aggctatatg cctcgtacaa ccatgcacgg tcatcaggat gcacgctgtc
     1681 tgtggatgtc acgacgcggc tcctcatccc attgctgttt gctgtttctc actctccagt
     1741 tgccgcaggt ctcgcggcga ttggcctcgt gggcctgtag ctcagttggc tagagcgcag
     1801 tcctgataag actgaggtcc cctgttcgag ccagggcagg cccaccacga gcacctttcc
     1861 aaaatgctat acgtcgtgca tgtcatgtcg gctctgtctc tgggggcgta gctcagttgg
     1921 gagagcatct ggtttgcatc cagagggtca ggggttcgag tcccctcgtc tccacccatt
     1981 gatcagcgtt cttgcaggta cgtgccggca tttgcatgcg ctatctccgt gtctggacgt
     2041 gcggggaggc tggtgactac agcggagggg acacacccgt tcccatcccg aacacggtcg
     2101 ttaagccctc cagccccgac gatactgcag gggcagccct gtgggacaat aggacgttgc
     2161 cggtctcccc gcccgcccaa gcgcggaacg cgccgctcga cgtgtacgtg tacgatgatt
     2221 ctgctcgcgc ttt
//
LOCUS       DASRPQ010002339         1018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_281485, whole genome shotgun sequence.
ACCESSION   DASRPQ010002339 DASRPQ010000000
VERSION     DASRPQ010002339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281485"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(491..829)
                     /locus_tag="VFD73_26430"
                     /pseudo
     CDS             complement(491..829)
                     /locus_tag="VFD73_26430"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
BASE COUNT          181 a          324 c          329 g          184 t
ORIGIN      
        1 agggagtcga tgacgtgatg ctcgcgacaa tggactgggt gcagtggtat aacgaggacc
       61 ggatccactc atatagcggc gatatgccac cgaaaaagta cgaggaaatc tattatcagg
      121 cactggaaac tggtaaacta acgaacagtt cgcagacata gcggcctcca gacttgccgg
      181 ggcggtccac tgcttctcct cggccgttag accgatgtgg tgccaacgcc cgggcgttac
      241 ccagcggaag atagtgagac cgggacgttt gcaccagcac gtctccacac agccacagcg
      301 cagttgacct gatagctcac tgggacggca ggctgaggcg tcggcccgct tcctcatgtg
      361 acacgtagcg gatcgccccg gcctcacggc gggccaggta tttggcctgg gcagcgtggc
      421 tcgaatcctc ggcctccatc ccttgccgac ctcgtaggtc gtcggccggt gagcatggcg
      481 ccggtagtgg tcaagcgtcg gcgatggtgc ccgtgccgtg gacgaccctt ccgccaacga
      541 tcgtcattgc tggaaccagg tcacgcagct cgtctggggc aacgcttgtg atgtcagtgc
      601 tccagactgt caggtcggcc aagcgaccgg gtgtgagtgt gccacgttga tgctgctcgc
      661 cgagcagttc cgttgcggac gtcgtgtgta gtcggatcgc ttcgccgatc gtgatggcgt
      721 gctctgggcc ctgcaccccc acgacggttt ggcgggttgc gaggccccag acggatctca
      781 tagctccgaa gatcccgact gggaagtctg agccagctgc caccagggct ccagcctcgt
      841 gctgggaaca ggttcgcgac gcggtccgga ccccagtagc cgagttccac ctcctacctc
      901 atcgaggccc gccgcgcgtt cgggagccgc ggcgtcacgc gggccccggc cgctgcccgg
      961 ccttgagccg gggccgtccc cggccctgac cgcaatacga cacagtggaa tccggcag
//
LOCUS       DASRPQ010002340         2788 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4340432, whole genome shotgun sequence.
ACCESSION   DASRPQ010002340 DASRPQ010000000
VERSION     DASRPQ010002340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2788
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4340432"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..945)
                     /gene="murF"
                     /locus_tag="VFD73_26435"
     CDS             complement(<1..945)
                     /gene="murF"
                     /locus_tag="VFD73_26435"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HZI77513.1"
                     /translation="MSGDQEVARITPSWPETAVREALSLPAPTGSQPITFSAISTDSR
                     TLKQGALFIALTGERFDGHDHLTAAANAGASGAVVRKGTPEVPGLVLFPVDDTLRAYG
                     QLARVRRRSIGGPVVAITGTNGKTSTKEMLAAVLATRYQTYATRANLNNLVGVPQTIL
                     ESPSDTEALIVEAGANLPGEIARYREIIEPSIAIVTNAVAGHLEGFGSLAGVVEEKLS
                     LTDQVPLAIVGTDPPTLAEGARRRARQVRTAGLRDADLIPERVTLDETARPVVTVQGY
                     TFRLAARGLHQADNAIRVWAAAEALGIAPELARAALEQF"
     gene            complement(942..2402)
                     /locus_tag="VFD73_26440"
     CDS             complement(942..2402)
                     /locus_tag="VFD73_26440"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: protein motif:HMM:NF001124.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HZI77514.1"
                     /translation="MPLTWSEMLDALRRDDLLSSAPASGPDPSGLGIDSRAVTRGMVY
                     LAVRGSQTDGHRFVPDAVGRGAAAILVETPQPTAVPQIVVRDSRRAALVLAAAWFGYP
                     ARRLRLIGVTGTNGKTTTTGLIRHLLNERESAGSIGTLGAFDGCGRAIPSTAGSLTTP
                     GAVDLQATLAELVRAGTTHVVMETSSHSLDQGRLDGLSFVAGVYTNLTRDHLDYHGTM
                     EAYLASKLRLSTLLAPSGVEIVNLDDDAWLALPPRTPRVTFGLHSAADVRATGVVLDA
                     RGSRFQLQGRFGTAEAGLPLLGDFNVLNALAAAATALALDVSPAAVVERLATTPQVPG
                     RMERISEVPCIVLRDYAHTPDALERALSSLKPLTTGRLIVVFGCGGDRDRGKRPVMGR
                     IAVELADLAIATSDNPRTEDPDAIIDEIEQGMRGRPHLRITDRLAAIHAALNEARSGD
                     TLLLAGKGHETYQVIGTEKIDFDEREIVRQAVGEQQ"
     gene            complement(2416..>2788)
                     /locus_tag="VFD73_26445"
     CDS             complement(2416..>2788)
                     /locus_tag="VFD73_26445"
                     /inference="COORDINATES: protein motif:HMM:NF015734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HZI77515.1"
                     /translation="KYYGGLTAAPVTRTMLQQALASRRLAIEHTSIEQSPVAFSPTSR
                     SGGPTPSRVIVSWPYHAPDALPATRAIPEVDGQPVREATLALHRSGFRVSLKGLGRVS
                     RTLPSPGEPARTGSTVLVWAE"
BASE COUNT          481 a          930 c          903 g          474 t
ORIGIN      
        1 gaactgctcc aacgccgctc gggccagctc gggagcgatc cccagcgctt ccgccgcagc
       61 ccagacccgg atggcattgt cggcctgatg aagaccccgg gcagcaaggc ggaaggtgta
      121 gccctgcacc gtcaccaccg gtcgagccgt ctcatcgagt gtgacccgct cgggaatcag
      181 gtcggcatca cgcaggcccg ccgtccggac ctggcgagcg cggcgccggg cgccctcagc
      241 cagtgtgggg gggtccgtcc ccacaattgc caggggaacc tgatcggtga gggacaactt
      301 ctcctcgacc acgccggcca gtgagccgaa gccttccagg tggccggcga ccgcgttggt
      361 gacgattgcg atggaaggct cgattatttc gcgatagcga gcaatctccc ccggaagatt
      421 ggcccccgcc tcgacaatca gagcctcggt atcggacgga gactcgagaa tcgtttgtgg
      481 cactccgacc agattgttga gattggcccg agtggcgtag gtctggtaac gggtggccag
      541 caccgcggcg agcatctcct tggtgctggt cttcccgttg gttcccgtga ttgccaccac
      601 ggggccaccg atggagcggc ggcgcactcg cgcgagctgg ccgtaggccc gaagcgtgtc
      661 gtcgacaggg aacagcacca ggccgggaac ttccggcgtg cctttcctta ctaccgcccc
      721 gctcgcaccc gcatttgccg cggcggtgag gtggtcgtgg ccatcgaatc gctcgcccgt
      781 caaggcgatg aacagggcgc cctgcttcag agtacggctg tcggtggaaa tggcggagaa
      841 ggtgatcggc tgggagccgg tgggtgccgg caggctcagc gcctctcgaa cagcagtctc
      901 cggccaggag ggcgtgatcc gggcgacctc ctgatcaccg ctcactgctg ctcgccgacc
      961 gcttgtcgca cgatctcccg ttcatcgaag tcgatcttct ctgtgccgat gacctggtag
     1021 gtctcgtgcc cctttcctgc cagcaggagc gtatcgcccg agcgcgcctc attcagcgcg
     1081 gcatggatgg cggccaaccg gtcggtgatc cggaggtggg gcctcccccg cataccctgc
     1141 tcgatctcat cgatgatcgc atcgggatct tcggttcgcg ggttgtccga ggtagcaatc
     1201 gcaagatcgg ccagttcgac ggcgatacgt cccatcaccg gccgcttgcc gcgatcccga
     1261 tccccaccac agccgaagac cacgatcagt cgtccggtgg tgagcggttt caaactgctc
     1321 agcgcccgtt cgagggcgtc gggtgtatgg gcgtagtccc gaaggacgat gcaaggcacc
     1381 tcggagatgc gctccattcg gccaggcacc tgtggtgtag tggctaaacg ctcaaccacc
     1441 gcggcgggtg agacatcgag tgccagtgcc gtcgccgccg ccgccagagc attcaacacg
     1501 ttgaaatcgc cgaggagcgg caaccccgcc tcggcggtac cgaaacgacc ttggagctga
     1561 aatcgtgacc cacgcgcgtc cagcaccacg ccggtggcgc ggacatccgc tgcggagtga
     1621 aggccgaagg tgactcgggg agtgcgcgga ggcagggcca gccaggcgtc gtcgtcgagg
     1681 ttgacgatct cgactccact cggagcaagc agggtgctca ggcggagctt ggaggccaag
     1741 tacgcctcca tcgtcccatg ataatccaga tggtcgcggg tgagattggt gtagaccccg
     1801 gcgacaaagc tgagaccatc caatctccct tggtccaggc tgtgagacga cgtctccatc
     1861 acgacgtgtg tcgtccccgc tcgtaccagt tctgccagcg tggcctgcag atccaccgct
     1921 cccggcgtgg tcaatgatcc cgccgtggaa gggatcgctc gaccgcagcc atcgaatgca
     1981 cccagtgttc caatgctgcc cgcgctctcg cgctcattca acaggtggcg aataagcccc
     2041 gtggtcgtgg tcttgccgtt ggtgccggtc actccgatca gcctcaggcg ccgggccgga
     2101 tatccgaacc atgccgccgc cagcaccaat gccgcgcgcc ggctatcccg caccacgatc
     2161 tggggcactg ctgtcggctg cggagtctcg accaggatcg cggcggcgcc ccggccgaca
     2221 gcatccggca cgaaccggtg tccatcggtc tgcgacccgc gaacggcgag gtacaccatg
     2281 cctctcgtga cggcacggct atcgatgccc agaccggaag gatcgggtcc cgacgccggc
     2341 gcggagctca ggaggtcatc tcgccgcagc gcatcgagca tttcactcca cgtcaacggc
     2401 atatcagctc cgggctcact cggcccacac cagcacggtc gagccggttc gcgcaggttc
     2461 tccaggagat ggcaacgtcc tgctgactcg gcccagcccc ttgaggctga cgcgaaatcc
     2521 actccggtgg agggccagtg tcgcttcccg gaccggctgc ccgtcgacct caggaatcgc
     2581 ccgggtagct ggcagggcat cgggcgcgtg gtacggccac gagacgatca cacgcgacgg
     2641 tgttggtccc ccgctccgcg acgttgggga aaaagcgacc ggactctgct cgatcgaggt
     2701 gtgctcgata gccagcctcc gggaagccag cgcttgctgc agcatcgtcc gggtaaccgg
     2761 agcggcggta agccctccat agtatttg
//
LOCUS       DASRPQ010002341         1939 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3745208, whole genome shotgun sequence.
ACCESSION   DASRPQ010002341 DASRPQ010000000
VERSION     DASRPQ010002341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1939
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3745208"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            87..>1939
                     /locus_tag="VFD73_26450"
     CDS             87..>1939
                     /locus_tag="VFD73_26450"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HZI77516.1"
                     /translation="MLRLGSAAGPYLWSMVAVLIGVGLRSLLHPELQNGLPFITLFPA
                     VFVAAFLGGFGPAVLATLLSTLAAAYFFLPPAGSLAVESPVARLGLVLFGITGLGIGA
                     LGEARRRAHRKAQEVAATAEREAARAEEEAIRAEEEAARAEEESARAEEEMLHAEEQS
                     ARAEQEARRAARESERVERILASITDAFTVVDHGWNITYMNERAADMLGGPREDLIGR
                     NYWDAFPAMAGTPFEHAFRRAVAGEHASRVTAYYPPRNIWIEITAYPSLEGLSIVGQD
                     VTQRIQASEVTARLAAIVASSADAIVGKKLDGTVTSWNQAAEEIFGYSAAEMIGSSIY
                     RLIPPELHETEADILRRVARGEPVEFAEAERIRKDGQRILIALTVSPIKDASGRVVGV
                     SSIKRDITQQKRIQLELESEMARSRELAQALDVSQALVRDLDGRVTYWSSGAARLYGY
                     SSAEAVGRNSHQLLHTEFPIPLDEIRSTLESTGRWEGEVVHTAKDGRRIHVATQWVLQ
                     RRRREDAPLVTEVNTDVTAQRLIEERIRQSERMEVVGQLAGGVAHEANNQMTVVLGAT
                     SFLLGRDDLPETAIQDLEYIREAAERTAAITAQLLAFSRRQVIQVRVVDLD"
BASE COUNT          365 a          605 c          671 g          298 t
ORIGIN      
        1 cttaaccgct gtcccgcaag cactagccga gcaacggcgg agccaggatg agccgtccag
       61 ccgggtccga accacacccg agccgcgtgc tgcgcctggg atctgcagca ggtccgtatc
      121 tctggtcgat ggtggcggta ctcatcggag tgggtctccg atctctgctc catcccgagt
      181 tgcagaacgg gctgccgttc atcaccctgt ttcctgccgt attcgttgcc gccttcctag
      241 ggggcttcgg tcccgccgtc ctggcaacgc tgctcagcac ccttgcagca gcctactttt
      301 tcctcccccc agcgggatcc ttggctgtcg agagtccggt ggcacgcctg gggctcgtgc
      361 tctttggcat aaccggactc gggatcggcg cactgggtga agccagacgg cgcgcccatc
      421 gcaaggccca ggaagtggca gcaacagccg agcgcgaagc ggcgcgggcg gaggaagagg
      481 ctatccgcgc cgaagaggag gcggcacgag ccgaggagga atcggcgcgg gcggaagaag
      541 agatgctcca cgccgaggag caaagcgccc gcgccgagca ggaggcccgt cgagcggcgc
      601 gagagtcgga gcgggtggaa cgcattctcg cgagcatcac ggacgcgttc acggtggtgg
      661 accacggctg gaacatcacc tacatgaatg agcgcgccgc ggacatgctg ggcgggccac
      721 gggaagatct catcggccga aactactggg atgccttccc ggcaatggca ggaactccct
      781 tcgagcacgc atttcggcgc gccgtggcgg gggagcatgc ttcccgggtg accgcctact
      841 accctccccg gaatatctgg atagagataa cggcgtatcc gtcgctcgaa ggtctcagca
      901 tcgtcggtca ggacgtcacc cagcggatcc aggccagcga ggtcaccgct cggctcgccg
      961 ccatcgtcgc cagttcggcc gacgcgattg tcgggaagaa actggacggc accgtcacca
     1021 gctggaatca ggcggcggag gagatcttcg gctacagcgc ggcggaaatg atcggcagct
     1081 cgatctaccg gctgatcccg cctgagctgc acgagaccga agcggacatc ctgcggcgag
     1141 tcgcccgagg agagccggtc gagtttgccg aggcggagag gattcgcaag gatggccagc
     1201 gcatcctcat cgccctcacg gtgtcaccca tcaaggacgc cagcggcaga gtggtcggcg
     1261 tctcgtcgat caagcgggac atcacccagc agaagcggat tcagctcgag ctggagagcg
     1321 agatggcgcg gagtcgggag ctagcccagg cgctggacgt ctcgcaggcg ctggtgcggg
     1381 acctcgacgg aagggtgacc tactggagca gcggcgccgc ccggctgtac ggttacagtt
     1441 cggcagaggc ggtaggccgg aactctcacc agttgctcca caccgagttt ccgatcccgc
     1501 tcgatgagat ccggtctacc ctcgagagca ccggccggtg ggagggcgag gtggtccata
     1561 ccgccaagga cggccgccgg atccacgtcg ctacccagtg ggtgctccag cggcggcgcc
     1621 gcgaggacgc accgctggtc acggaggtga acaccgacgt gaccgcgcaa cggctcatcg
     1681 aagagcggat ccggcagtcc gagcgcatgg aggtggtggg acagctggcc ggcggggtgg
     1741 cccatgaggc gaacaaccag atgacggtag tgctgggggc caccagcttt ctgctcgggc
     1801 gcgacgattt gccagagacg gcgattcagg accttgagta catcagggag gcggcggaac
     1861 gcactgctgc tatcaccgca caattacttg cattcagccg ccggcaggtg atccaggtca
     1921 gagtcgtgga cctggatga
//
LOCUS       DASRPQ010002342         1037 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4669166, whole genome shotgun sequence.
ACCESSION   DASRPQ010002342 DASRPQ010000000
VERSION     DASRPQ010002342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4669166"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            497..>1037
                     /locus_tag="VFD73_26455"
     CDS             497..>1037
                     /locus_tag="VFD73_26455"
                     /inference="COORDINATES: protein motif:HMM:NF040183.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI77517.1"
                     /translation="MRRRRLAAELRKLREKSSLTADQVSKEVGISKSTLSRIENAQVS
                     VMVPVARSLLTLYGVAADDIEALVQIARDARKRGWWHAYDQVLPEWFSTYVGLEAEAN
                     EIKTFQTQLIPGLLQTPDYARAVISAEHPDAPATEIDRRVELRMRRQELDSPPRLWAI
                     IDESVLRRPVGGASVMRAQL"
BASE COUNT          204 a          327 c          331 g          175 t
ORIGIN      
        1 ggccgatttt tgaacaaggt cagctttaga gtcacagatc tgcgcgaaat gcgagcattc
       61 cgtgatacgg acagcgatct tggaaggccg tacgagatca aaagatggag ggagcgacct
      121 tgcactgtgg acagcgagtg atcgagccgc actcgcggca ccagcgtgac ttcacccgga
      181 agctgagcag gccagccagg tagccgagta ggcctacgcc caccagcgcc ccggcgatca
      241 tcggcactcc tgttcgcttg tggaaccagg tacggaggat gggaaagcga ccggccccca
      301 gcacccacaa accggtcgcc ttccccctcc acccgttgcc gccgttctgg ccacaccggc
      361 aacggggaga tcaggttatc gactcacatc atggtgcgct agcacttccc gatctgcaac
      421 tcccacaacg caacagcgat tgaaactcgt gatccacagg cggcacactt atgccgtgaa
      481 tcccgcaagt cccaccgtgc ggcggcgtcg gctcgccgcc gagcttcgca agcttcggga
      541 gaagtcctcc ctgaccgccg accaggtgtc caaagaggtc ggcatctcca agagcacctt
      601 gagccgcatc gagaacgccc aggtgtcggt gatggtgccg gtcgcccgct cactgctgac
      661 gttgtacggg gtggccgccg acgacatcga ggcattggta cagattgctc gtgatgcccg
      721 caaacgtggg tggtggcatg cgtatgacca ggtgctgccg gaatggttct ccacgtacgt
      781 ggggctcgag gccgaggcca atgagatcaa gacgttccag acccagctga tacctggcct
      841 gttgcagacg ccggactatg cccgcgctgt catctcggcc gagcatcccg acgcgccggc
      901 gaccgagatc gaccgtcggg tggagttgcg gatgaggcgc caggagttgg acagcccgcc
      961 ccggctctgg gcgatcatcg atgagagtgt gctgcggcga ccggtcggcg gggcgtcggt
     1021 gatgcgggcc cagctcg
//
LOCUS       DASRPQ010002343         1220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2460712, whole genome shotgun sequence.
ACCESSION   DASRPQ010002343 DASRPQ010000000
VERSION     DASRPQ010002343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2460712"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..792
                     /locus_tag="VFD73_26460"
     CDS             <1..792
                     /locus_tag="VFD73_26460"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI77518.1"
                     /translation="VAGFAARFLVESHELRTTGSHAARSTTSPRQAIGRVLSHWSEPA
                     SRLIWIYTIGIGAFYGTIQIVPLLLKNRWAVTEANIGYFVMYLGGMGVVVRSLILGRM
                     VDLLGDARLSRLGLILLAAGLVCTGVARHAGILFLGFTLMPLGTAFLFPCITGLLSRV
                     VPGNERGLYMGVQHTFGGVSRVLFPVTAGFLMDRFGLGVPFWISGLLVIATLPVAWEL
                     GTFLGQAAAPRTAAEVVSAADVTGEFPVEKAAESEAGPVDRRAAP"
     gene            810..>1220
                     /locus_tag="VFD73_26465"
     CDS             810..>1220
                     /locus_tag="VFD73_26465"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZI77519.1"
                     /translation="MQKALFLMVLTFGCRPSSTPQQSATGAHEEQPSAAERVVRQQYD
                     AYNRHDLEAFVAAHAPDVRAYLFPDSLLFTGRQALRERFGKLFAAAPQVHATVEARTT
                     HGDFVVWRETATGMPGGKTNTGIFVWEVHNGQITK"
BASE COUNT          196 a          371 c          407 g          246 t
ORIGIN      
        1 gtggccggtt tcgccgcgcg ctttctggtc gagtctcacg agctccgcac aaccggctcc
       61 cacgccgcca ggtccactac cagcccgcgc caggcgatcg ggcgggtgct ctcgcactgg
      121 agcgagcctg cctcgagact catctggatc tacaccatcg ggatcggcgc cttctacggc
      181 accattcaga tcgtgccgct cctgctcaag aaccgctggg cggtcaccga ggcgaacatc
      241 gggtacttcg tgatgtacct gggcggcatg ggcgtggtgg tgcgatcgct gattctgggc
      301 cgaatggtgg atctcctggg agatgcgcgc ttgtcgcggc tgggactgat cctgctggcg
      361 gcaggcctgg tgtgcaccgg tgtggcgaga catgccggca ttctcttcct gggcttcacg
      421 ctcatgccgc tcggcaccgc ctttctcttt ccctgcataa ccgggctcct gtcccgagtg
      481 gtgccgggca acgagcgcgg actgtacatg ggagtgcagc acaccttcgg cggagtgtcc
      541 cgggtgctct ttccggtgac cgccgggttc ctgatggacc gcttcgggct gggagtgccg
      601 ttctggattt caggactgct ggtcattgct acgctgccgg tcgcatggga gctggggaca
      661 tttctggggc aggcagcggc gcccagaacg gcggccgagg tggtatcggc ggcggatgtg
      721 acgggagagt tcccggtaga gaaggcggcg gagtcggaag ccggtccggt agatcgacga
      781 gctgcaccct gaccgttctg gagatcacta tgcaaaaggc tctattccta atggtactca
      841 cgttcggatg ccggccctcg agcacaccgc aacagtctgc cactggagct cacgaggagc
      901 agccatccgc ggccgagcgg gtggtacgac agcagtacga cgcctacaat cgtcacgatc
      961 ttgaggcttt cgtcgcagct cacgcgccgg acgttcgagc ttacctcttt ccggattccc
     1021 tgctttttac ggggcgccag gctcttcgcg agcggttcgg caaattgttt gcggccgctc
     1081 cccaggttca tgccaccgtg gaagctcgga ccactcacgg ggactttgtg gtttggaggg
     1141 agaccgccac cgggatgccc ggaggcaaga cgaacaccgg gatcttcgta tgggaggtgc
     1201 acaatggtca gatcacgaag
//
LOCUS       DASRPQ010002344         2456 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1549850, whole genome shotgun sequence.
ACCESSION   DASRPQ010002344 DASRPQ010000000
VERSION     DASRPQ010002344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2456
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1549850"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..667)
                     /locus_tag="VFD73_26470"
     CDS             complement(<1..667)
                     /locus_tag="VFD73_26470"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HZI77520.1"
                     /translation="MLPERDAWGERLPRHLGLWSAVAVLIGSTIGSGIFRVPAGVAAR
                     LQDPGPVFLAWVIGGVIALFGALTLAELAGALPRSGGVFAYILEAFGPLPAFLFGWSE
                     LTVIRASALGAIATIFAEYLGHFIALRPMQVRWVAAAAVLLVGSLNYVGVKRAALLMN
                     LATMAKYAALAALVLLAFTAGQGDTAHFTPAWSGGVNLSLIATALIAIMWTYDGWADH
                     SFMG"
     gene            766..>2456
                     /locus_tag="VFD73_26475"
     CDS             766..>2456
                     /locus_tag="VFD73_26475"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: protein motif:HMM:NF014665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0048034 - heme O biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HZI77521.1"
                     /translation="MSEADRPRLLRWLAWSGAALVTGLIVLGGVVRITGSGMGCGDHW
                     PLCNGQWFPRLDLPTLIEIGHRWVAALVSLVVLALTGAAWLKHRTNRSLRTPATLAGV
                     LLIVQVLLGAVTVKLELPAWIVITHFANAMALLAVLLVTALRSGRPLGQPVLAGASQH
                     RGHSLVVATAALGFVVILFGAQVANFDAGLLCLGFPLCNGALLPPRTPLASLTWAHRV
                     LAFLFLALVITLNLRLSAPPTTTGRKLQRLALAVLWITVLQIGVAAAMVLHLLPPGLR
                     ATHLLVGTVLWATLVVLVYTSAHTEQRTLAGELPDRPGLVADLVTLTKPRIISLLLVT
                     TVAPMFITPAGLPSLSRVLWVILGGYLMAGGANAINMWFDRDIDDKMGRTRLRPIPAG
                     RIAPAAGLAFGIGLGVLAFAVFWYQVNALSASLALSGLLFYVFIYTIWLKRSSPQNIV
                     IGGAAGAFPPLVGWTAMTGRLDLAAIYLFAIVFYWTPPHFWALALIKRNEYARAGIPM
                     LPVVRGEKRTTFEMLAYTLILLPLTIMPSLFGAMGVFYGIAAALLGARLLWYCVRV"
BASE COUNT          395 a          805 c          779 g          477 t
ORIGIN      
        1 ctcccatgaa cgagtggtca gcccagccat catacgtcca catgatggcg atcaacgccg
       61 ttgcgatcag cgagaggttg acccctccgc tccaggccgg tgtaaaatga gcggtgtcgc
      121 cctgacccgc ggtgaaggcc aggagcacca gcgccgcaag tgccgcgtac ttcgccatcg
      181 tggccagatt catcagcagc gccgcccgct tcactccgac atagttcagc gaccccacca
      241 ggagcaccgc ggccgcagcc acccacctca cctgcatcgg gcggagcgcg ataaagtgcc
      301 ccaggtattc ggcaaagatg gtcgcgattg caccgagcgc agacgcccgg atgaccgtca
      361 gctcggacca gccaaacagg aaagccggaa gcgggccaaa cgcttccagg atgtaggcga
      421 acactccgcc ggaccggggg agcgctcccg ccagctcggc cagggtcagg gcaccgaaga
      481 gcgcgattac cccgccaatg acccaggcga gaaagacggg gccggggtcc tgcagccgcg
      541 cggcgacgcc ggccggcacc cggaagatgc cgctcccgat ggtcgagccg atcagaaccg
      601 ctacggcact ccatagcccg aggtgccgag gcagtcgctc tccccaggcg tcgcgttcag
      661 gaagcatggc caaatatatt cttcgcagcg atctttcagc tccagtttgg cctcatcgag
      721 gcaccggacc caaagcgttc tgggagttga tgcaggagca tgaatttgtc tgaagcagat
      781 cgtccccggc tcctgcgctg gctggcatgg tccggggccg ccttggtcac cggcttgatc
      841 gtgctgggcg gagtcgtccg gatcaccggg tccggaatgg ggtgcggcga ccattggccg
      901 ctgtgcaacg ggcagtggtt cccccggctc gaccttccca ccctgatcga gatcgggcat
      961 cgctgggtcg ctgccctcgt gagcctggtc gtgcttgcgc ttaccggtgc ggcatggctc
     1021 aagcatcgga cgaatcgcag cctgagaacc ccggcgacgc ttgccggggt tttgctgatc
     1081 gtgcaggtgc tgctcggcgc tgtcacggtc aagctggagt tgcctgcctg gattgtcatc
     1141 acccatttcg ccaacgcgat ggcgctcctg gcggtcctgc tggtgaccgc gctccggagc
     1201 ggaagacccc tggggcagcc ggtcctcgca ggagcctccc agcatcgggg ccattctttg
     1261 gtggtggcaa cggcagcgct ggggttcgtg gtgatcctgt tcggtgccca ggtggcgaac
     1321 ttcgatgccg ggttgctgtg cctggggttc ccgctctgta atggtgcgct gctgccacct
     1381 cgcaccccgc tcgcctctct tacctgggct caccgagtgc tggcgtttct gtttctggct
     1441 ctggtgatca cgctcaacct gcggctctcg gcaccaccga ccactacagg acggaaactc
     1501 cagcgattgg cgctcgccgt tctctggatc acggtccttc agattggggt ggcagcagcg
     1561 atggtgctgc acctgctgcc ccccggtctc agagcaaccc atctgctggt ggggaccgtc
     1621 ctctgggcga cgctcgtagt gctggtctac acctcggcac acaccgagca gcggactctg
     1681 gcaggcgagc tgccggaccg acccggcctt gtggccgatc tcgtcacgtt gaccaaaccg
     1741 cgaatcattt ccctgctcct ggtcacgacc gtagcgccga tgttcatcac cccggcagga
     1801 cttccttctc tgtcgcgggt cctgtgggtc atactgggcg gatatctgat ggcgggcgga
     1861 gccaacgcga tcaacatgtg gttcgaccgg gacatcgacg acaagatggg tcgcactcgg
     1921 ctccggccga tccccgccgg caggattgca ccggccgcgg gactggcctt cggtattgga
     1981 ctcggggtgc tcgcgtttgc ggtcttctgg taccaagtca atgccttgag cgcctcactg
     2041 gcgctcagcg gtcttctctt ctacgtcttc atttatacca tctggctcaa gcgatcgagt
     2101 ccgcagaaca tcgtcatcgg tggtgccgcc ggagcgttcc caccgctggt cggctggacc
     2161 gctatgaccg gcaggctgga tctggccgcg atctatctgt tcgccatcgt gttctactgg
     2221 accccgccgc atttctgggc cttggcgctg atcaagcgga atgaatacgc ccgagccggc
     2281 atccccatgc tcccggtggt gcggggcgag aagcggacca cgttcgagat gctggcgtat
     2341 accctgatcc tgctgccgct cacgatcatg ccgtcattgt tcggcgcaat gggcgtcttc
     2401 tacggaattg cggcggcgct gctgggcgcg aggctgctgt ggtactgtgt gcgcgt
//
LOCUS       DASRPQ010002345         1223 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3444950, whole genome shotgun sequence.
ACCESSION   DASRPQ010002345 DASRPQ010000000
VERSION     DASRPQ010002345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1223
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3444950"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..833)
                     /locus_tag="VFD73_26480"
     CDS             complement(<1..833)
                     /locus_tag="VFD73_26480"
                     /inference="COORDINATES: protein motif:HMM:NF012592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HZI77522.1"
                     /translation="MATTLAKTDADMTNPNPTRQSASEGSNLVEMSWDPITRIVGSLG
                     IYTKIDFANRQVAECYSTSSIFRGYSIFMKGKDPRDAHFITSRICGICGDNHATCACY
                     AQNMAFGVRPPALGEWIVNLGEAAEYMFDHNIFQDNLVGVDFCEKMVRETNPSVWEKA
                     KTTEAPHAGDHGYRTIADIMTALNPFEGEFYRETLQVSRYTREMFCLMEGRHVHPSTL
                     YPGGVGTVPTVQLFTDYMVRLMRYVEFMKRVVPLHNDLFDFFYEALPGYEEVGRRRIL
                     LG"
     gene            complement(848..>1223)
                     /locus_tag="VFD73_26485"
     CDS             complement(848..>1223)
                     /locus_tag="VFD73_26485"
                     /inference="COORDINATES: protein motif:HMM:NF026070.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77523.1"
                     /translation="GYYEQGDFATEYGSPKCIVKLGCWGPVVNCNVTKRGWMAGIGGC
                     PNVGGICIGCTMPGFPDKFMPFMDEPPGSRVSSGWINIVYGPMIRKLRGFTNATANKE
                     PRWRHSGPTLTTGYQPTTYGKG"
BASE COUNT          205 a          345 c          426 g          247 t
ORIGIN      
        1 cccagcagga tccgccgccg gcccacttct tcataaccgg gcagggcttc gtagaagaaa
       61 tcgaaaaggt cgttgtggag cggtaccacc cttttcatga actccacgta gcgcatcaac
      121 cggaccatgt aatcggtgaa gagctgcacg gtgggtaccg tgccgacgcc gccgggatag
      181 agggtggacg gatggacgtg ccgcccttcc atcaggcaga acatctcgcg ggtgtagcgg
      241 ctgacttgca gcgtctcgcg gtagaactcg ccctcgaagg ggttcagcgc cgtcatgatg
      301 tcggcgatgg tgcggtagcc gtggtcgccg gcgtgcgggg cctccgtggt cttggctttc
      361 tcccagacgc tggggttggt ctcgcgcacc atcttctcgc agaagtccac gcccaccagg
      421 ttgtcctgga agatattatg gtcgaacatg tactcggcgg cctcgcccag gttgacgatc
      481 cattcgccca gcgcgggcgg gcggacgccg aaggccatgt tctgggcgta gcaggcgcag
      541 gtggcatggt tgtcgccgca gatgccacag atgcggctgg tgatgaagtg ggcatcgcgt
      601 gggtctttgc ccttcatgaa gatgctgtag ccgcggaaga tcgaggaggt gctgtagcac
      661 tcagcgacct ggcggttggc aaagtcgatc ttggtataga tgcccaggct gcccacgatg
      721 cgggtgatcg ggtcccagga catctcgacc agattgctcc cctcgctcgc cgactggcgg
      781 gtggggttag gattggtcat atcggcgtcg gttttcgcca aggtagttgc catatgagtg
      841 ctcctctcta ccctttcccg taggtggtgg gttggtagcc ggtggtgagg gtggggccgg
      901 agtggcgcca cctgggctct ttgttggcgg tggcgttggt gaagccgcgc agcttgcgga
      961 tcatggggcc gtagacgatg ttgatccagc cggaggagac cctggagccg ggcggctcgt
     1021 ccatgaaggg catgaactta tcggggaaac cgggcatggt gcagccgatg caaatgccgc
     1081 ccacgttggg gcagccgccg atgccggcca tccagccgcg cttggtgacg ttgcagttca
     1141 cgaccggccc ccagcagccg agcttgacga tgcacttggg ggagccgtac tcggtggcga
     1201 agtcgccctg ctcgtaatag ccg
//
LOCUS       DASRPQ010002346         2048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2181703, whole genome shotgun sequence.
ACCESSION   DASRPQ010002346 DASRPQ010000000
VERSION     DASRPQ010002346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2048
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2181703"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..321)
                     /locus_tag="VFD73_26490"
     CDS             complement(<1..321)
                     /locus_tag="VFD73_26490"
                     /inference="COORDINATES: protein motif:HMM:NF016196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 family protein"
                     /protein_id="HZI77524.1"
                     /translation="MQDITNPEERQRNLDRMKRRATGLLVLMGAIFIVARMLEAQHPW
                     VGFIRATAEASMVGGIADWFAITALFRQPLNLPIPHTAIIPNRKDRIGRSLGNFVQNN
                     FLSPE"
     gene            952..>2048
                     /locus_tag="VFD73_26495"
     CDS             952..>2048
                     /locus_tag="VFD73_26495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="HZI77525.1"
                     /translation="MFDELSSKLNATLQKLTGRGVLTEDAVKEGLREIRRILLEADVS
                     FDLTRDFLERVQAKAVGLATIKDVRPGHQLVKIVYDELVALLGEKQAPIAYSTVPPTV
                     ILLVGLQGSGKTTTAGKLARRLKLEQKAPFLVAADVYRPAAIDQLHTLGRQVEVGVYS
                     DNASQDVVKIVRDGIAAAGKARARSVIVDTAGRLQIDDEMMDELKRLQAAVSPHEILL
                     VADGMTGQDAVRIAQGFHDALGITGVVLTKMDGDARGGAALSIYGVTHAPIKYIGVGE
                     KLDALEPFYPDRLAGRILQQGDILSLVEKAQTAVDEKEAERLAKKVTSKKGLDLTDFL
                     GAMKQMQKMGPLKNVLGMLPGVNPAMLQAAK"
BASE COUNT          400 a          600 c          663 g          385 t
ORIGIN      
        1 ctcgggcgag aggaagttgt tctggacaaa gttccccagg ctccggccga tgcggtcctt
       61 ccggttcggg atgatggcgg tgtggggaat cggaaggttg agtggctggc ggaacagcgc
      121 ggtgatggca aaccagtcgg cgatgccgcc gaccatcgag gcttcggcgg ttgcccggat
      181 gaagcccacc cagggatgct gcgcctccag catgcgcgcc acgatgaaga tcgcccccat
      241 gaggacgagc agtccggtgg ccctccgctt catgcggtcg aggttacgct gacgctcttc
      301 agggttagtg atgtcttgca tgggagccat tctggaagat atggcggaga ggcggagagt
      361 cggaggggcg gagagacgga gggccggaga gttagagagt gtgggcctta gggatacggg
      421 cggccaagtg cggaatagag gccccaggtg agcttgcctg tctggtttcg caacacgtcg
      481 agcattgcca tcgtgtcttg atctattagg cctctatcct tgctgaaatg gagtagatat
      541 gtcagctctg agagcgaacc tctggctcta tctaaatatc tacggaattc cactttccct
      601 cgcttcgcgg caccctcaga aatgttcgtc ggaatggaca aggcagcccg acgtacctga
      661 gctgtcagtt ggtaacgttc ttgagtaggc caacgatctg taacttggta cacacggagc
      721 gccagttggt gggcagccct ccaggcctca aacttctcat acgccatcat gatctagagt
      781 tgtacgtccg aaccgcgccg agagaatcgg tattccgcaa gctgtagcga gttgacatgt
      841 cctgattgac atgtcctgct gcgcccctcc gcccctccgc ccctccgccc ctccggctgt
      901 ccgcccgccc gccttgaaga aacctcaacc agcgactaat cttacgggct tatgttcgac
      961 gagctatcca gtaaactcaa cgccacgctc cagaaactca ccgggcgggg cgttttaacg
     1021 gaagacgcgg tcaaggaggg gctccgggag atccggcgca tcctgctcga ggccgacgtc
     1081 agtttcgatc tgacccgcga cttcctcgag cgagtccagg ccaaggccgt cggcttggcg
     1141 accatcaagg acgttcggcc cggccatcag ctggtcaaga tcgtctacga tgagttagtt
     1201 gccctgctcg gagagaagca ggcaccgatc gcgtattcca cggtgccacc gacggtgatc
     1261 ctgctggtgg gtctccaggg atcgggcaag acgaccaccg ccggtaagct ggctcgccgg
     1321 ctcaagctgg agcagaaggc tccgttcctg gttgccgccg acgtgtaccg cccggccgcg
     1381 atcgaccagt tgcatacgct gggacggcag gtcgaggttg gcgtctacag cgacaacgcc
     1441 tcgcaggacg tggtgaagat cgttcgcgac ggcatcgccg cggctggcaa agcgcgggcg
     1501 cgcagcgtca tcgttgatac cgccggccgg cttcagatcg acgatgagat gatggacgag
     1561 ctcaagcggc tccaggcggc ggtctcaccc cacgagattt tgctcgtcgc cgatggaatg
     1621 accggccagg atgcggtccg gattgcccag gggttccacg acgcgctcgg tattaccggc
     1681 gtcgtgctga ccaagatgga cggtgacgcc cggggcgggg ccgcgctctc gatctatggc
     1741 gttactcacg cgccgatcaa gtacatcggc gtgggcgaga agctcgacgc gctggagccg
     1801 ttctatcccg accgtctggc cggccggatt ctccagcaag gcgacatcct gtccctggtg
     1861 gagaaggccc agaccgcggt cgacgaaaag gaagccgagc ggctggccaa gaaggtcacg
     1921 tcgaagaagg gactcgatct gaccgatttt ctgggcgcca tgaagcagat gcagaagatg
     1981 gggccgctca aaaacgttct cggcatgctg ccgggggtca atccggcaat gctgcaggcg
     2041 gccaagat
//
LOCUS       DASRPQ010002347         2092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4036635, whole genome shotgun sequence.
ACCESSION   DASRPQ010002347 DASRPQ010000000
VERSION     DASRPQ010002347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4036635"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1034
                     /locus_tag="VFD73_26500"
     CDS             <1..1034
                     /locus_tag="VFD73_26500"
                     /inference="COORDINATES: protein motif:HMM:NF012700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77526.1"
                     /translation="IAAREAELFGALRASVGQAISRIQRSSRVVARLDVWTGLAERAV
                     GNQYVRPTVTRDFELTLRGCRHPVIERMMPRESFIPNDTKFIEAERVLLITGPNMAGK
                     STILRQIGLCVVLAQIGSFVPAAAATIGTVDRLFTRVGASDNLAGGQSTFMVEMSETS
                     AILHNATAQSLVLLDEIGRGTSTYDGVAIAWAVTEHLHDRIGCKTMFATHYHELMQLP
                     EMLQHARNYNVAVREAGDTIVFLHRLEPGGTDRSYGIHVGQLAGLPAPVVSRARKVLE
                     TLEGEHRVAPGAPPVVARDPGQLALFAEASQPNPVVEELKLLDVDRLTPLEALNRLAD
                     FKRRAGNTG"
     gene            1045..1470
                     /locus_tag="VFD73_26505"
     CDS             1045..1470
                     /locus_tag="VFD73_26505"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HZI77527.1"
                     /translation="MISLARSAGAGSVALTLLACGSADDGTMKLVDREPPPPVVPVEE
                     PPVAINPVSPVRYPPALLAQGIEGRVLLRLFVDSAGNVVPDSTRIAESSGYPALDSAA
                     LAGSPELHFSPALLQGRPVAAPFLQPVQFRRSHSASATP"
     gene            1467..>2092
                     /locus_tag="VFD73_26510"
     CDS             1467..>2092
                     /locus_tag="VFD73_26510"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase family protein"
                     /protein_id="HZI77528.1"
                     /translation="MKRPQHLQPYESVLETIGWTPLIRLARVGAGIRTPIYGKAEYVN
                     PGGSVKDRIGLAIIEEAERRGELQAGGTIVEGTSGNTGVGLAIAAALKGYRCVFTMPD
                     KMSQEKVRLLKAYGAEVVITPTAVPPDHPDNYVMKAKQIVKETPGAVLANQFYNATNP
                     EAHYATMGPEIWQQTQGKITHLVAGAGTGGTVSGAGKYLKEQNPRIRIV"
BASE COUNT          396 a          675 c          668 g          353 t
ORIGIN      
        1 gcatcgcggc gcgcgaggcg gagctctttg gtgccctccg cgcgtcagtc ggacaggcga
       61 tcagccgcat tcagcgatcg tcccgggtcg tggcccgact cgacgtctgg actggcctgg
      121 cggaacgagc cgtgggcaac cagtatgtcc gccccaccgt cactcgggat tttgagctta
      181 cgctcagagg atgtcgccac cccgtgatcg agcgcatgat gccccgcgag tcgttcatac
      241 cgaacgacac caagttcatc gaggccgagc gtgtgctcct gatcacgggg cccaatatgg
      301 ccggcaaatc gaccatcctc cggcagatcg gtctctgcgt tgtcctggcc cagatcggat
      361 cgttcgtccc tgccgctgcg gccaccattg gtacggtcga tcgactcttc actcgggtag
      421 gcgcgagcga taatctggcc ggcggccagt cgacgttcat ggtcgagatg agcgagacca
      481 gcgccattct gcacaacgcc acggcgcaaa gcctggtgct tctcgatgag atcggtcgcg
      541 gcacttcgac ctacgacggc gtggccatcg cctgggcggt gaccgagcac ctgcacgacc
      601 ggatcggctg caagacgatg ttcgccaccc actatcacga gctgatgcag ctgcccgaaa
      661 tgctgcaaca tgcccgcaac tacaatgttg ccgtgcgcga agcaggagac accatcgtgt
      721 ttcttcatcg gctcgagcca gggggcaccg atcggtcata cgggatccac gtgggtcaac
      781 tcgcgggcct tccggccccg gtggtgagcc gggcccgcaa agtcctggaa acgctcgagg
      841 gggagcaccg ggtggcgcct ggcgccccgc cggtggttgc gcgagacccc gggcagctcg
      901 ccctcttcgc cgaggcgtcg cagcccaacc ccgtcgtgga agagctcaag cttctggatg
      961 tggacagact gacgccgctg gaagcactca accggctggc agacttcaag cgccgtgcgg
     1021 gaaataccgg ttgatggagg tgggatgatc tcactggcga gatcggcggg agcgggaagc
     1081 gtcgccctga cgctcctggc ctgtggctcc gccgacgacg gcaccatgaa gctggtcgat
     1141 cgcgagccgc caccgccggt ggtgccggta gaggagccgc cggtagccat caatccggtg
     1201 tctccggtcc ggtatccgcc ggcactgctg gcccagggaa tcgagggccg agttctgctc
     1261 cgactctttg tggattcggc cggcaatgtg gtgccggact ctacccgaat cgctgaatcg
     1321 agcggatatc cggcactgga ctccgctgcg ctcgctgggt caccggaact gcacttctca
     1381 ccggcactgc tccaaggccg accggtggcg gcacctttcc ttcagccggt gcagttccgc
     1441 cgctctcact ccgcatcggc caccccatga agcggccgca acatcttcaa ccttacgagt
     1501 ccgtcctcga aaccatcggc tggaccccgc tcatacgact cgcgcgggtg ggggcgggca
     1561 tccggactcc tatctacggc aaggccgagt acgtcaatcc gggtggctcg gtcaaagatc
     1621 ggatcgggct tgcgatcatc gaggaggctg agcgacgagg cgagctccag gccggaggaa
     1681 cgatcgtcga aggaaccagc gggaataccg gggtcggact ggcgattgcc gccgcgctca
     1741 aaggttatcg ctgcgtcttc accatgccgg acaagatgtc acaggaaaaa gtccggctgc
     1801 tgaaggcgta tggcgcggag gtggtgatca ctcccaccgc ggtgccgccg gatcatcccg
     1861 acaactacgt catgaaggcc aagcagatcg tcaaggaaac ccccggcgcg gtgctggcca
     1921 atcagttcta caatgcaacc aatcccgaag cacattatgc aacgatgggc ccggagatct
     1981 ggcagcagac ccaggggaaa atcactcacc tggtggcggg agccggcacc gggggtaccg
     2041 tcagcggagc agggaagtac ctgaaagaac aaaatccccg catccgaatc gt
//
LOCUS       DASRPQ010002348         1039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3746227, whole genome shotgun sequence.
ACCESSION   DASRPQ010002348 DASRPQ010000000
VERSION     DASRPQ010002348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3746227"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..971)
                     /locus_tag="VFD73_26515"
     CDS             complement(<1..971)
                     /locus_tag="VFD73_26515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77529.1"
                     /translation="MTITGIGSTGQSAGGNALPVRPRVETEDPDAELLTLDSDVAAAP
                     ISVIPAARAAPESEPDTPRRSGFRGLFHWRDVLALGSFVAVALFLTAPLWLHLDHGLR
                     DDPQDQAFFEWMLAHGARVLTDGAYPFFSDRMNYPDGVNMMANTSVLAVSLPMTPVTL
                     LWGPHVAFNVFLTAALALTGISWYLVLSRQFLSSRLAAWIGALFCTFAPSMISHAGGH
                     PNIVSQFLVPLIIWRTLELRRAGRVIRNGLILGALLIWQAFINLEILFMTAVGLGILC
                     FVMWLKRRRTTPGEVRNFLRGLAVAGVVSLAVLAYPLSVQFFGPQSY"
BASE COUNT          240 a          332 c          324 g          143 t
ORIGIN      
        1 tggtagctct gcggcccgaa gaactgcacg gacagcgggt aggccagcac cgccaggctc
       61 accacgccgg ccaccgcgag cccgcgcagg aagttgcgga cctcgccggg agtcgtccgg
      121 cgccgcttca gccacatgac gaagcacaag atccccagcc ccaccgcggt catgaagagg
      181 atctcgagat tgatgaacgc ctgccagatc agcagtgcgc ccaggatcag gccgttacgg
      241 atcacccgac cggctcggcg cagctcgagg gtccgccaaa tgatcaatgg aaccaggaat
      301 tgcgagacga tgttcgggtg gccaccggcg tgggagatca tgctcggcgc gaacgtacag
      361 aacagcgcgc cgatccacgc tgcgagccgt gagctcagga actgacgcga gagcaccaaa
      421 taccatgaga tgccggtgag ggccaaggcg gcagtaagga atacattgaa cgccacatga
      481 ggtccccaca aaagagtgac cggcgtcata ggtagtgaaa ccgccaacac cgaggtgttg
      541 gccatcatgt tgaccccgtc ggggtaattc atacggtcgg agaagaacgg atacgcgccg
      601 tccgtgagca cccgcgcacc gtgtgccagc atccactcaa agaaggcctg gtcctgagga
      661 tcatcacgca ggccatgatc aaggtgcagc cacaacggcg cggtcaggaa cagcgccacc
      721 gctacgaaac tccctagcgc gagaacgtcc cgccagtgga acagacctct aaagccggaa
      781 cgccgtggag tatccggctc actctccgga gcggctcggg ctgcgggtat gaccgaaata
      841 ggcgcggccg cgacgtccga gtcaagagtc agcagctccg cgtccgggtc ctccgtctcg
      901 accctcggcc gaaccggcag ggcgttcccg ccggctgact ggccggtcga gccaataccc
      961 gtaatcgtca tagcatcgcg cagcctaacc gaggaacgta accgtgtagc atcgagaagc
     1021 cgatgcgtga tcgagccga
//
LOCUS       DASRPQ010002349         1003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1550681, whole genome shotgun sequence.
ACCESSION   DASRPQ010002349 DASRPQ010000000
VERSION     DASRPQ010002349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1550681"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..246
                     /locus_tag="VFD73_26520"
     CDS             <1..246
                     /locus_tag="VFD73_26520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77530.1"
                     /translation="AREVSELMASTATMLEDSIQASLQQKSAADQVDGAIQQIREAAD
                     GLVAEQAHWSDTAEQLDTLVRELDSALQTGRGEHRAG"
     gene            complement(351..719)
                     /locus_tag="VFD73_26525"
     CDS             complement(351..719)
                     /locus_tag="VFD73_26525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77531.1"
                     /translation="MTHSFTTIVTSCPATGNRITIEFSFFGFQIPIKNGKFSISLNDL
                     SDRFTWSGTITPKKATGTEFYDLAAFDNQNGLQDCASGTVPWAAQALVPASKPAAPHT
                     SYNVTITKAANGSVHYTVTH"
     gene            complement(655..882)
                     /locus_tag="VFD73_26530"
     CDS             complement(655..882)
                     /locus_tag="VFD73_26530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77532.1"
                     /translation="MRKYLGLSVISVCLLVLLTGTTAFAGTSSTYYAGKNTQGQKLLF
                     SVDQTANGPRFDPFFYHHSHQLPGNWQPDHH"
BASE COUNT          186 a          295 c          341 g          181 t
ORIGIN      
        1 gcccgcgagg tgagcgaact gatggcgtcg acggcgacga tgcttgagga ctcgatccag
       61 gccagcttgc agcagaaatc cgcggccgac caggtggatg gcgccatcca gcagatccgt
      121 gaggcggcag acgggctcgt cgccgagcag gcgcactggt ccgacaccgc cgaacagctt
      181 gacaccctgg tcagagagct ggacagcgcc cttcagacgg gccgcgggga gcatcgcgct
      241 ggctgagggc ccagctcagc cggcccacat tgccaccgtc cggcggatca tcatgccggc
      301 ccggggaggt ggtctccccg ggccgacgga tatctgccct ggcgctgccg tcagtgggtc
      361 acggtgtagt gcacggagcc gttggcggcc ttggtgatgg tgacgttata agaggtgtgc
      421 ggtgcggcag gtttcgaggc cggcacgagc gcctgggccg cccacggaac cgtgcccgag
      481 gcgcagtcct gcaggccgtt ctggttgtcg aacgcggcca ggtcgtagaa ctcggtcccg
      541 gttgccttct tgggagttat ggtcccgctc caggtgaagc ggtcggagag gtcgttgagc
      601 gagatgctga actttccatt cttgatcgga atctggaaac cgaagaagct gaactcaatg
      661 gtgatccggt tgccagttgc cgggcagctg gtgactatgg tggtaaaaga atgggtcaaa
      721 tctcgggccg ttcgcggtct gatcgacgct gaacagcagc ttctggccct gcgtgttctt
      781 gcccgcatag taggtgctgc tcgtgccggc aaaggcggtc gtgcccgtca ggagcaccag
      841 caggcatacg ctgatcactg acaaaccgag atacttgcgc attgcgaacc tctttcctcc
      901 cgtgattagc cgagacccgg ccacactcgc gaaatcgacc ttcgcaccaa taggccgata
      961 cggcaagaag ggctggaaaa tggttcagct cagccggacg cgg
//
LOCUS       DASRPQ010002350         1524 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1869785, whole genome shotgun sequence.
ACCESSION   DASRPQ010002350 DASRPQ010000000
VERSION     DASRPQ010002350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1869785"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..617)
                     /locus_tag="VFD73_26535"
     CDS             complement(<1..617)
                     /locus_tag="VFD73_26535"
                     /inference="COORDINATES: protein motif:HMM:NF021530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-histidine N(alpha)-methyltransferase"
                     /protein_id="HZI77533.1"
                     /translation="MPEISVKQWPGGVAALRHSNARMLAEVASGLAAPQKELPPKYFY
                     DHRGSELFEEITRLPEYYPTRTERALLQSWMPHLIPDLGTRTLIELGAGSAEKSRIIL
                     TAMRAAGVPGLYVPIDVSASFLEQTAARLRRDFPGLLVEPVVADIAEEFSAPRDLQHP
                     ALYAFLGGTIGNFYPPAAIRLLARVRMAMKPEDRFLMGVDLRKDVA"
     gene            complement(610..>1524)
                     /locus_tag="VFD73_26540"
     CDS             complement(610..>1524)
                     /locus_tag="VFD73_26540"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HZI77534.1"
                     /translation="RMVLQHEYQHNETMLQTLQLKQGTPYSPAERWATPAPALEFARG
                     AMVRFPGGIVPIGTEDRSAAYDNERPVHSVELTPFWVDVTPVTNGDFARFVDDGGYSR
                     REYWSDAGWAWLQESGATAPKYWIRSESGWITRSMDQTGALSPTHPVCHVCYYEAEAY
                     SRAVGKRLPTELEWEAAASWDPKTNTKNAFPWGNRPASRSLANLDQLTFSTAPIGSYP
                     ENVSAIGCYGMIGDVWEWTSSDFCPYPGFEAFPYPEYSEPFFGTEYKVLRGGSWATRP
                     GAIRNSFRNWDYPIRRQIFSGFRCARDA"
BASE COUNT          282 a          470 c          486 g          286 t
ORIGIN      
        1 gcgacatcct tccgcagatc gactcccatc aggaacctgt cctccggctt catcgccatc
       61 cgaactcggg ccagcaggcg aatggcggca gggggataaa aattgccgat ggtccccccg
      121 aggaatgcat acagcgcagg atgctggaga tcgcgtgggg cgctgaactc ttccgcgata
      181 tcggccacca ccggctcaac cagcaagcca ggaaagtccc ggcgcagacg agcggcggtc
      241 tgctccagga aactggcgct gacgtcgatc ggcacgtaga gtcccggcac tcctgccgct
      301 ctcattgcgg tgagaataat ccggctcttc tccgcgctcc cggcaccgag ctcgatcaga
      361 gtgcgggtgc ccaggtccgg aatcaggtga ggcatccacg attgcagcag cgcgcgctcg
      421 gttcgggtcg ggtaatactc cggcaaccgg gtgatttcct cgaacagctc cgagccccgg
      481 tgatcgtaga agtatttcgg gggaagctcc ttctgtggtg ccgcaagacc cgacgccacc
      541 tccgccagca tccgggcatt cgagtggcgc agggcggcaa cgccaccggg ccactgcttg
      601 actgagatct caggcatcgc gcgcacaccg aaagccgctg aaaatctggc ggcggatggg
      661 ataatcccag tttcggaagc tgttgcgtat ggccccgggc cgggtggccc acgagccgcc
      721 ccgcagaacc ttgtattcgg ttccgaaaaa gggctccgag tactcgggat aggggaaggc
      781 ttcgaacccg ggataggggc agaagtcgct ggatgtccat tcccacacat cgccgatcat
      841 gccataacag ccgatcgctg agacgttctc cgggtagctg ccgatcggcg cggtgctgaa
      901 ggtcaactgg tcgaggttcg cgagactcct gcttgccggc cggttacccc aggggaaagc
      961 gttcttcgtg ttggtcttgg gatcccacga tgccgcggct tcccactcga gctctgtggg
     1021 gagccgctta ccgacagctc ggctatacgc ctctgcctcg tagtagcaca cgtggcatac
     1081 cgggtgagtc ggagagagag cgccggtttg gtccatggag cgggttatcc aaccgctctc
     1141 gcttcgtatc cagtatttcg gcgctgtggc tccggattcc tgcagccaag cccagccggc
     1201 gtcggaccag tattcacgcc ggctgtagcc accgtcatcg acgaatctgg cgaagtcgcc
     1261 gttggtcacc ggagtgacgt cgacccagaa cggtgtgagc tcgactgaat ggactggccg
     1321 ctcgttgtca tatgccgctg agcggtcttc ggtgccgatg ggaacgatcc ctccagggaa
     1381 tcggaccatg gctccgcggg cgaattccaa agcaggagcg ggagtagccc agcgctccgc
     1441 cggactatat ggggtgccct gcttcagctg gagggtctgg agcatggtct cgttgtgctg
     1501 atactcgtgc tgcagcacca tgcg
//
LOCUS       DASRPQ010002351         2113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2462330, whole genome shotgun sequence.
ACCESSION   DASRPQ010002351 DASRPQ010000000
VERSION     DASRPQ010002351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2462330"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2113
                     /locus_tag="VFD73_26545"
     CDS             <1..>2113
                     /locus_tag="VFD73_26545"
                     /inference="COORDINATES: protein motif:HMM:NF025707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77535.1"
                     /translation="GFLPEDAVALTWQNLIPNPGTNQAVELRPEDIDSLIRFSGRTEQ
                     QETAMYLTLHADTAGGIVQENNASRWSLPERLSRPRWRSMVTSLSSTGLDITQDEYLE
                     FWVFQPGNRPADSAGVRLIFDLGSVNEDALAIAPDTISVSGADTTFSGRQYVGLGRLN
                     TERNSIDIFDAQVDDRGILNDRPDTLIDAATGAVLDTVPLCQRILSNAVPVFPWGDLS
                     SRCTRGNGSLDTEDLNGDNVLNASGTNENVNRYIVTLSVTDKDFVRNGGANGTFSGWQ
                     LYRIPLRTPDDSIGTPNPRLIQHLRITVAAPPDAGTPDVVARFAFARMRLVGSPWVRR
                     AQSPIAGISGSSAKATGEVVASIVSTENRTDLGYESPPGVIEGVARRGGDQSSLGTQI
                     NEKSLRIIASGMEVGDRAEAYLRFPGGPQNVLGYSTLRLWMRGRGAGWEEGDFQAFVK
                     LGSDDRNFYLYRAPAHTTTWEPEFVVDLETWRRLRAELETRWLSGAPPSGSAECGGDP
                     SAYVACEGPYLVHLADPGINPPNLAAVQELSAGIYRVAGAVSVPETELWVDDIRLGDA
                     VSATGTALAIDTRFVASDVGSITASYVRQDGQFHQINTDPTYRTNGAFQLGSNWRLDR
                     FLPASLGLSVPLAVSYNRTDVDPELLTGSDIRGAALTGLRRPQSWSANYTLAIRRSER
                     GKNWLVQGLADPLSLNGVLTQG"
BASE COUNT          381 a          659 c          680 g          393 t
ORIGIN      
        1 gggtttctgc ccgaggatgc ggtcgccctg acctggcaga atctgattcc caatccaggg
       61 acgaatcagg ccgtcgagct ccggccggaa gacatcgatt ccttgattcg attctccggc
      121 cgcacggaac agcaggagac cgcgatgtat ctcacgctgc acgcggatac cgcgggcgga
      181 atcgtgcagg agaacaacgc gtcgcgctgg tctctgccgg agcggctctc gcgtccccgt
      241 tggcggtcga tggtgacttc actcagctcg accggactgg acattaccca ggacgagtac
      301 ctcgagttct gggtctttca gccgggcaat cggccggcgg actcggccgg agtgcggctg
      361 attttcgatc tcggctcggt caatgaggat gccctggcca ttgcaccaga cacgatcagt
      421 gtatccggtg ccgacaccac gttcagcggg cggcagtatg tgggattggg gcggctgaat
      481 accgagcgca acagcatcga catcttcgat gctcaggtgg acgacagagg cattctcaac
      541 gatcggccgg acacgctgat cgacgccgcg actggagcgg ttctcgatac cgtccctctc
      601 tgccaacgga ttttgagcaa cgccgttccg gtgtttccgt ggggagatct gagcagtcgc
      661 tgcactcggg gcaacgggag cctggacacc gaagacctga acggcgacaa cgtgctcaat
      721 gcctccggca ccaacgagaa cgtcaaccgc tacatcgtga cgctcagcgt caccgacaag
      781 gatttcgtgc ggaacggggg cgccaacggc acgttcagcg gttggcagtt atatcgcatt
      841 ccgctccgga ctccagacga ctcgataggc acgcccaatc cacgtctgat tcagcacctg
      901 cgaattacgg tcgcggcgcc ccctgacgcg ggaacgccgg acgtggtggc gcggtttgcc
      961 ttcgctcgga tgcggctggt cggttctccc tgggtgcgcc gggcccagtc tcccatcgcc
     1021 ggcatctccg gctcgagcgc caaggcgacc ggtgaggtgg tcgcatccat cgtctcgact
     1081 gagaatcgaa ccgatctcgg gtatgagtca ccgccgggtg tgatcgaagg ggtcgcccgc
     1141 cggggtggcg atcagagcag cctgggcacg cagatcaatg agaagtcgct ccggatcatc
     1201 gccagcggta tggaggtggg cgaccgggca gaagcgtacc tccgcttccc cggtggcccg
     1261 cagaacgtgc tgggatacag caccctcagg ctgtggatgc gaggccgagg tgccggatgg
     1321 gaggaaggcg atttccaagc gttcgtgaaa ctgggaagtg acgatcgaaa cttctacctc
     1381 taccgcgcgc cggcgcacac cacgacttgg gagccagagt ttgtggtcga tttggagacc
     1441 tggcgccggc tgcgggccga gcttgaaacc cgctggctca gtggcgctcc tccctctgga
     1501 tcggccgagt gcggcggtga tccctcggct tacgtcgcat gcgagggtcc ctatctcgtt
     1561 cacctcgccg atccgggcat caacccaccc aatttggcgg cagtgcagga gctctctgcc
     1621 ggcatctacc gcgttgccgg agcggtgagc gtccccgaga ccgagctctg ggttgacgat
     1681 atccgccttg gggacgcggt ctcggcaaca gggacggcgc tagcaatcga cactcgcttt
     1741 gtagcctcgg acgttggcag catcacggca tcgtacgtcc gacaggatgg ccagtttcac
     1801 cagatcaaca ccgatcctac ctaccgaacg aatggcgcct ttcagctcgg cagcaactgg
     1861 cgactggatc gttttctacc tgcctcactg ggactctcgg ttccgttggc ggtgtcgtac
     1921 aacagaaccg atgtcgaccc cgagctgctg accggcagcg atatccgtgg cgccgccttg
     1981 accgggttgc ggcgtcctca gtcgtggagc gcgaattaca cgctcgctat ccggcggagc
     2041 gagcggggaa agaactggct ggtccagggt cttgccgatc cgctctcgct caacggcgtg
     2101 ctgacgcagg gcc
//
LOCUS       DASRPQ010002352         1033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2183002, whole genome shotgun sequence.
ACCESSION   DASRPQ010002352 DASRPQ010000000
VERSION     DASRPQ010002352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2183002"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..299
                     /locus_tag="VFD73_26550"
     CDS             <1..299
                     /locus_tag="VFD73_26550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZI77536.1"
                     /translation="VQYAAEPYRAVLARHGIVQSMSRRGNCLDNAPMESVFASLKVEH
                     VHHCRFRTREEAKAAVFDYIEVFYNRQRLHSALGYRTPAEARASMEEVTMPAAA"
     gene            complement(440..>1033)
                     /locus_tag="VFD73_26555"
     CDS             complement(440..>1033)
                     /locus_tag="VFD73_26555"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HZI77537.1"
                     /translation="IAEARQQIQATITQRLQESATDRREIRAKLAETEEKLRAAADVA
                     TRREIVAPENGTLVNQKVFTVGAVLKPGDPIFDLIPEQDRLVAEVNVQPTDIDVVYPG
                     LRSEVRLPAFKQRLVPYLHGHVTWVAADVTVNEQTRQQYYKAHVLIEPDQLARLPNVF
                     LVPGMPVEAHIQIGQRTFFRYITQPLRDSFTRAFREQ"
BASE COUNT          192 a          340 c          314 g          187 t
ORIGIN      
        1 gcgtgcaata cgccgctgag ccttatcggg cggtattggc gcggcacggc attgtccaat
       61 ccatgagccg ccgtgggaac tgcctggaca acgcaccgat ggagagcgtc tttgcctctc
      121 ttaaggtcga acacgttcat cattgccgct tccgtactcg cgaggaagcg aaagcggccg
      181 tgttcgacta catcgaggtg ttctacaatc ggcagcgcct gcattccgct ctcggctatc
      241 gaacacccgc cgaggcacgg gctagcatgg aggaggtcac catgccagca gccgcataac
      301 gctctgatct cacccctcca cactgcgggg gaagctcacc atggccctgc tcccaaagca
      361 aggccaggca atctaccacc cgtcagccac ccaaaaagcc tccagcagcg aagcaatcag
      421 ctgggttcgg tatcagaccc tactgctccc ggaacgcccg ggtgaagcta tcccgcagcg
      481 gttgggtgat gtagcggaag aaggtccgtt ggccgatctg gatatgggcc tccaccggca
      541 taccgggaac caggaacaca ttgggcaggc gcgcgagctg gtcaggctca atcagtacgt
      601 gggccttgta atattgctgg cgcgtctgct cgttcacggt cacatcggcg gccacccaag
      661 tcacatggcc atgcaggtag ggtaccagtc gctgcttgaa ggccggcagc cggacctcgg
      721 accgcaggcc ggggtagacc acgtcgatat cggtcggctg aacgttcacc tcggcgacca
      781 ggcggtcctg ctccgggatc aggtcgaaga tcggatcacc cggcttcagc accgcgccca
      841 cggtaaagac cttctggttc accaacgtcc cattctccgg ggccacgatc tcccgccgcg
      901 tcgccacatc ggcggcggcg cgaagcttct cctcggtctc cgccagcttg gcgcggatct
      961 cgcgccggtc ggtcgcggat tcctgcaggc gctgggtgat cgtggcctgg atctgctggc
     1021 gcgcctcggc gat
//
LOCUS       DASRPQ010002353         1047 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3446143, whole genome shotgun sequence.
ACCESSION   DASRPQ010002353 DASRPQ010000000
VERSION     DASRPQ010002353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3446143"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..279
                     /locus_tag="VFD73_26560"
     CDS             <1..279
                     /locus_tag="VFD73_26560"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI77538.1"
                     /translation="FQRHPGRFSALLADVVMPRVPGTELVARVRAIRPELPALLMTGY
                     TQAELLTRGFEIQGAQVLTKPFRPAALVSAVRKLFEGMGDPNAPADRG"
     gene            687..>1047
                     /locus_tag="VFD73_26565"
     CDS             687..>1047
                     /locus_tag="VFD73_26565"
                     /inference="COORDINATES: protein motif:HMM:NF012632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77539.1"
                     /translation="MRSRPFALWFRCTCALALGLTAGTLGCGEDAEAPTIPATTAPQA
                     TPTLATTSTPLSFLQVSAGSHHTCGVTTANRAYCWGDNSRGQLGDGTQTSRTGPVAVK
                     GGLTFLRVSAGDAHTCGI"
BASE COUNT          177 a          357 c          333 g          180 t
ORIGIN      
        1 tttcagcgtc atccggggcg cttcagcgca ctgctggcag atgtcgtgat gccacgcgta
       61 ccgggcaccg agttggtcgc ccgggtgcgc gccatccgtc ctgaactgcc cgcattgctc
      121 atgaccggct acacccaggc ggagctgttg acccgggggt tcgagatcca aggtgcgcag
      181 gtactgacca agccattcag gccagcggcg ctcgtgtcag ccgtgcgcaa actgttcgag
      241 gggatgggcg acccgaatgc gcctgcagat cgtggatgac tccccctcgt gcggcgcacg
      301 tatgcattga cgttctgccg gagtaagcac gctggtggag gccgaaaatg gacggcaggc
      361 gttcgacaca cacggcgccg ccgcgcagcc atttgatctg atcctgccgg gccttcgtac
      421 cggacagtga accgggtcga gtttatcgaa catgtcagac gccgcgccgg cactctgcaa
      481 agtgctcatc gagggcacgc ctgcggcagc agggcagcct caacgtgatg cggcggtgta
      541 tcctcgcgcc ctatggagag tctgaagacg cccaagggcc tggaaacccg ctcttgatgt
      601 cggcttgacg gatctcagct atacctgtac ccactgaaaa gagtctcgac ttcgccgccc
      661 gctctcctct tcgccaggga tgacccatgc gtagccgtcc gttcgccctc tggttccgct
      721 gtacctgcgc cctggccctc gggctcacag ccggcacgct gggctgtggg gaagacgcgg
      781 aggctcccac catccctgcg acgactgcgc ctcaggccac cccgaccctc gccaccactt
      841 cgaccccgct ctcgttcctc caggtcagcg ccgggtcgca tcacacctgc ggcgtgacga
      901 ccgcgaatcg ggcatactgc tggggagaca acagccgcgg tcagctcggc gatggtaccc
      961 agacgagccg caccgggccg gtggcggtga agggcgggct gaccttcctg cgggtgagcg
     1021 cgggagacgc ccacacctgc ggcatca
//
LOCUS       DASRPQ010002354         1387 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1551245, whole genome shotgun sequence.
ACCESSION   DASRPQ010002354 DASRPQ010000000
VERSION     DASRPQ010002354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1387
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1551245"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..866)
                     /locus_tag="VFD73_26570"
     CDS             complement(126..866)
                     /locus_tag="VFD73_26570"
                     /inference="COORDINATES: protein motif:HMM:NF040183.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5753 domain-containing protein"
                     /protein_id="HZI77540.1"
                     /translation="MGIDAAHLGRVESGKRPPTEHLAARCDAVFPERKGWFSEFYDES
                     RHWPEVPASFKSWPEYEDKAANLRDWSPSIVTGLLQTEDYARALISVQPHISEETVSM
                     RLASRMERQKHVMGRDNPPAAWFIIDELSLYRQVGTASAMAAQLRHLLGIAAAPKVTI
                     QVLPAVAHPVNASGFLMADDAVWIEHAACGFVYTEKETVSALELRFDSLRAESYRASE
                     SLALIERLEGIWKSGASPLTQTATAGTA"
     gene            1060..1278
                     /locus_tag="VFD73_26575"
     CDS             1060..1278
                     /locus_tag="VFD73_26575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77541.1"
                     /translation="MNPAEEPPDFTQLDDTALLTARQQMRAELQRLRPRSPGHAALSA
                     RYDASLDELVERARKAWTATSEENRWTT"
BASE COUNT          254 a          456 c          439 g          238 t
ORIGIN      
        1 tggccgggtt ggctaacgct gctcggccag gaaccggcgc catgcgccta cggggaaagt
       61 gagcactgcg ccgtcacggt gcttggtgtc acgaaccagg accacgccat cacggctggc
      121 tgtttctacg cagttcccgc cgttgccgtc tgagtaagag gacttgcgcc agacttccat
      181 atgccttcca acctctcgat gagggctagt gactcgctgg ccctgtagct ctcggcacga
      241 aggctatcga acctcagctc aagtgccgaa acggtttcct tctcggtgta gacgaagccg
      301 caggccgcgt gctcgatcca caccgcgtca tcagccatca ggaagccgct ggcgttcacg
      361 gggtgggcga cggccgggag cacctggatg gtgactttcg gcgcggcggc gattccgagc
      421 aggtgacgga gttgggcggc catggccgac gcggttccca cctgccggta gagggacagc
      481 tcatcgatga tgaaccaggc ggcgggcggg ttgtcgcggc ccatcacgtg cttctggcgc
      541 tccatgcggc tggccagccg catgctgacg gtctcctcgc tgatgtgcgg ctgtacggaa
      601 atcagcgccc gcgcgtaatc ctcggtctgg agaagtccgg taacgatgga cggtgaccag
      661 tcacgcaggt tcgcggcctt gtcctcgtac tcgggccagg atttgaacga cgccggcacc
      721 tcgggccagt gccgggactc gtcatagaac tcggagaacc aacccttgcg ttcgggaaag
      781 acggcatcgc acctggcggc aaggtgctcg gtgggcggcc gcttaccgct ttcgacccgg
      841 ccgaggtggg cggcgtcgat acccatgtgc tggcctagct ccacgagcgt tcacccgtgc
      901 gcgagccgct ccttcttcat ctggcggccg aagtggcctg ccgcaccatt gatagagctg
      961 ccagccatga gcatcagtct gccagatgtc taccgctagt ggcaggatct gcgacacgct
     1021 gagcggcagc caaaacacgc accgctaaag gcaagactcg tgaacccagc cgaggaacct
     1081 cccgacttca cccagctcga tgacacggcg ctgcttaccg cgcggcagca gatgcgcgcg
     1141 gaactccaac ggctgcggcc gcgctcaccc ggccacgctg cgctaagtgc ccggtatgac
     1201 gccagccttg atgaactagt cgagcgcgcc cgcaaggcct ggaccgctac cagtgaggaa
     1261 aaccgatgga cgacctgaaa cgtgcccgcc tgctggccgt cgaggtactg cttgccgacc
     1321 ccgacgcact ccataacgac gcgctggaag cagaccttta tcctgcgcga ccagctacag
     1381 gcccaga
//
LOCUS       DASRPQ010002355         1571 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1870438, whole genome shotgun sequence.
ACCESSION   DASRPQ010002355 DASRPQ010000000
VERSION     DASRPQ010002355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1870438"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(400..1149)
                     /locus_tag="VFD73_26580"
     CDS             complement(400..1149)
                     /locus_tag="VFD73_26580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77542.1"
                     /translation="MWSRKRSTLDVSYLNLRRCIGVLGIALPFILRIGSAIFPPDPYS
                     VSAYYYSAMRNILVASLCVLGIFLLTYRGYDKLDSRITNVCGAATIGVALFPTSNPGF
                     KPTWVGHVHPIVAGIALAGQALMALQFTQSAPRDGTARWLDDVKRLLRALVFRYAQRV
                     YDEHGKKLTRNRIYSACAWLIIIGVVLALVQNFWPDSVKAETQWLFWFESLSIASFGF
                     AWLVKGETLFKDAATPDQAVPVEAIPAQAGQ"
BASE COUNT          302 a          495 c          505 g          269 t
ORIGIN      
        1 ccctgcgcga gcgatcgagg gcggcccgcc cgatgctcgc gggtagaccg cacgaggctg
       61 tcggcaacgg cagtcccaga tggatgaccg ccgccccgcg caagcgggcg cacagaaccc
      121 ggcctacagg ccggctcacc ccccacatac ggtcttgacc tgcggcgcag tattacacgc
      181 gggtcaagcc gggcacattc cgggcacatg gcctgtgccc ggaatgtgcc cggccgaagg
      241 agcgctcacc gccagcagtg acatcgttag gtacagcttc agccggacct caccgacttg
      301 tcctccgcgc aggagttgag tcagtggcgg aggcggggct gaggcggcgt tctcccgtct
      361 gataactgac tccggccgcg ccaccagcgg cggtggcatc tactggcctg cctgagccgg
      421 gatggcctct acggggactg cctgatccgg ggtggcagcg tccttgaaca gggtctcgcc
      481 cttcaccagc caggcgaagc cgaatgatgc gatggacagc gactcgaacc agaacagcca
      541 ctgagtttcc gccttcaccg agtccggcca gaagttctgc acgagagcga ggacgacgcc
      601 gatgatgatc agccaggcac aggccgagta gatccggttg cgggtgagct tcttgccatg
      661 ctcgtcgtat acccgctggg cgtaccggaa gaccagcgcg cggagcaggc gcttgacgtc
      721 gtcaagccag cgtgccgtcc catcacgcgg cgcgctctgg gtgaactgca gcgccatcag
      781 cgcctgcccg gccagtgcga tcccggccac aatcgggtgc acatggccaa cccaggtcgg
      841 cttgaatccg gggttcgagg tggggaacag cgcgacgcca atcgtggcgg caccgcagac
      901 gttggtaatc cggctgtcta gcttgtcgta tccccggtag gtcagcaaga agatgccaag
      961 gacgcacagc gacgccacca ggatgttgcg catcgcggag tagtaatagg cgctgacgga
     1021 gtagggatct ggcgggaaga tcgcactccc gatgcgcaag atgaacggca gcgcgatccc
     1081 gaggaccccg atgcagcgcc ggaggtttag gtacgacaca tccagggtgc tccgttttcg
     1141 actccacatg gcccactccc tagctcccgg gtgagagtgt cgcgctcatt tggcaaacag
     1201 cctcatgaac ccggaggcat ctagcgtcat ccgtgataca acgcgcacga gtaatcacca
     1261 aggcctgtgg atcaagatct ttagacagct tcaggctcgg tgtcttcgcc atgtcgttcg
     1321 gcggatttac cgtgtatctt cgcgcgccca tcagcgcttg cacgccagaa tttgctctta
     1381 attccgcctt cgatggtgcc tggtcgccaa ggattcgtga gcagaaccgg agggtacggc
     1441 gtccgagatc atcaagctcg cggcaggtcg agttggtggc tctggcggag tggggcttta
     1501 gtgccagccc accaatcagg ggtcaatggt gacgtccgta cagccagcaa gtgcagcaac
     1561 cctggcggcc a
//
LOCUS       DASRPQ010002356         1310 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2462661, whole genome shotgun sequence.
ACCESSION   DASRPQ010002356 DASRPQ010000000
VERSION     DASRPQ010002356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1310
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2462661"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..445)
                     /locus_tag="VFD73_26585"
     CDS             complement(<1..445)
                     /locus_tag="VFD73_26585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HZI77543.1"
                     /translation="MKRVLIANRGEIALRVIRACHEAGLEAVSVYSTADRAAPHVHAA
                     DFAIEIGPPSPGQSYLSIDRLIAAAEASGADAVHPGYGFLAERAAFAEAVERAGLTFV
                     GPPASAIRAMGDKTEARRRMQEAGVPIVPGLSAPVDDINAARQAAK"
     gene            complement(587..>1310)
                     /locus_tag="VFD73_26590"
     CDS             complement(587..>1310)
                     /locus_tag="VFD73_26590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77544.1"
                     /translation="GHRGDPDGLLYLDFAATAFDQAVRLSVDSGLVYRGLAELERSVV
                     VVEDSGWNIGGPAHSQPNTPALPPLILELGANLLSSCPAGGVLLLGSDLEALSVWYDN
                     TDLRAREVIPISPDRYATDSIYRRRMAEAMGISPSLPVRTALEDVASRRVLCLTPDAD
                     SAAAPRLDWTPFRLTRVSRSSQPRNDALSLTELLQATRQGTSIWVQDVRGIYDRAARF
                     NALLCSSLLPAFGDSPPTACRP"
BASE COUNT          242 a          432 c          435 g          201 t
ORIGIN      
        1 ccttcgccgc ctgtctcgcc gcgttgatat cgtccaccgg tgcactgaga cccggaacga
       61 tcgggacccc ggcctcctgc atccgccgcc gggcttccgt cttgtcgccc atcgcgcgga
      121 tggcactggc tggcgggccc acaaacgtca gccctgcgcg ctcgactgct tcggcaaagg
      181 ccgcgcgttc cgccagaaag ccataccctg gatggactgc gtccgccccc gatgcttcag
      241 cggcagcgat cagtcgatcg atggagagat agctctgacc cggcgaagga gggccgatct
      301 caatcgcgaa gtcggcggcg tgaacatgcg gggccgcacg gtcggcagtg gaatagaccg
      361 agaccgcctc caaccccgct tcatgacagg cacgaatgac cctgagggcg atctcgccgc
      421 ggttggcgat cagcacgcgt ttcatagtgg ccggaaggtg cggtagctac gggacgagcg
      481 gaagaggtga gcggagaatg cgaaccgtga atctgatgtg ccggtgagtg gagcgtcata
      541 ccctaccttc cgcccggttc agccggatcc gccccttccg cgtcactcat ggtcggcacg
      601 cagtgggagg tgagtcgccg aatgcgggca gcagactgct gcacagcagc gcgttgaacc
      661 gggcagcgcg atcgtaaatc ccccggacat cctgaaccca gatcgacgtc ccctgccggg
      721 tggcctggag cagctcagtc agagagagcg cgtcgttgcg cggctgcgag gagcggctca
      781 cccgggtcag gcggaacggt gtccagtcga gccgcggagc cgcagcactg tccgcgtcgg
      841 gggtgagaca caggacccga cgtgaggcca cgtcctccag cgctgtcctg accggcaaac
      901 tcggactgat ccccatcgcc tcggccatac gccggcgata gatcgagtcg gtggcgtagc
      961 gatcggggct gatgggaatc acctcgcggg cgcgaagatc ggtgttgtcg taccacaccg
     1021 aaagcgcttc caggtcactc cccaacagga gaactccgcc cgctggacag gagctcagca
     1081 ggttggctcc gagctccaga atgagcggcg gcaaggcagg tgtgttgggc tggctgtgcg
     1141 ctgggccccc gatgttccac ccggagtcct ccaccacgac aaccgagcgc tccagttccg
     1201 ccagaccccg gtacaccagt ccggagtcga ccgagaggcg gaccgcctgg tcgaatgcgg
     1261 tggccgcaaa atccaaatag agaaggccat cgggatcgcc ccggtggccc
//
LOCUS       DASRPQ010002357         1277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4671709, whole genome shotgun sequence.
ACCESSION   DASRPQ010002357 DASRPQ010000000
VERSION     DASRPQ010002357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4671709"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..930)
                     /locus_tag="VFD73_26595"
     CDS             complement(<1..930)
                     /locus_tag="VFD73_26595"
                     /inference="COORDINATES: protein motif:HMM:NF024002.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase family protein"
                     /protein_id="HZI77545.1"
                     /translation="MADSVAAVDVRRRAGWLPGDQDELEAWLTGHRERVAARGKQAVL
                     HPVLTQFQELIDSDPVVRMYLDQMIAQVPQAKQYRKRHLQNVPQMLRLINEVLTMAPE
                     YSQDALVVLPLGAILDWAMGTPAGFAAFRDRQINAMFKKILAAWCEFLTSSDSRYVLN
                     DSPSGWKCTAARRAVGIEQYQYTPEDEYWGFASWNDFFTRRFTEGARPVASPDDDKVI
                     VSACESTPYGLATDVQRQDRFWIKSQPYSLQDMLANDDSAGQFVGGTVYQAFLSATNY
                     HRWHSPVTGTIVRAFVQEGTYYSEADSEGADAVE"
BASE COUNT          215 a          441 c          374 g          247 t
ORIGIN      
        1 ttcgaccgcg tcggcgcctt cggagtcggc ctcggagtaa tacgtgccct cctggacgaa
       61 ggcccgcacg atcgtcccgg ttaccgggct gtgccaccgg tgatagttgg tggcgctcag
      121 gaaagcctga tagacggttc cgccgacgaa ctggccagcc gaatcgtcat tggccagcat
      181 gtcctgcagc gaatagggct ggctcttgat ccagaaacgg tcctggcgct ggacgtcggt
      241 ggccaggccg tagggcgttg actcgcacgc actgacgatc actttgtcgt cgtctggtga
      301 ggcgaccgga cgcgcgccct cggtgaagcg ccgggtgaaa aagtcgttcc acgacgcgaa
      361 cccccagtac tcgtcttcgg gggtgtactg gtactgctca atgccgacag cgcgccgggc
      421 tgcggtgcac ttccagccag acggtgaatc gttgagcacg taacgcgagt cgctgctagt
      481 caggaactca caccacgcgg ccaggatctt cttgaacatc gcgttgatct gccggtcgcg
      541 aaaggcagcg aaaccagccg gcgtgcccat tgcccagtcc aggatcgcgc cgagcggcaa
      601 gaccaccagc gcgtcctgac tgtattccgg ggccatcgtc agcacctcgt tgatcagccg
      661 cagcatctgc ggcacgttct gcagatgccg cttgcggtac tgcttagcct gcggcacctg
      721 agcgatcatc tggtcgaggt acatgcgcac caccggatcg ctgtcgatca gctcctggaa
      781 ctgggtgagc acaggatgca gcacggcctg cttacccctg gcggccaccc gctcccggtg
      841 cccggtcagc caggcctcca gttcgtcctg gtcacccggc agccagccgg cccgccgccg
      901 cacgtcgaca gccgcaacag aatccgccat ggtcagcaat ctaaccaccg cacaccgtcg
      961 cggatccccg agccagcgcc ccgagcagtc cggtcagcgc ttcgcggcgt tcttggcttt
     1021 cttgcctttg tgcttggcct tgcctgcgcc tttcttagcc ttgcccttca ctgactttgc
     1081 cccgtgcttg gccttcttag ccacacccat gactgactcc tcttggccct agcgcaagcc
     1141 tcgcgaccgc aatagacggg ccagattcag gatgaacgtc gtcctgacac gacgatccgg
     1201 tggccgcaat cttccacgct ggataccgct caaaccttgc ctgccacctg tctcctcgcc
     1261 ttcccgggtt ggcggca
//
LOCUS       DASRPQ010002358         1797 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1211218, whole genome shotgun sequence.
ACCESSION   DASRPQ010002358 DASRPQ010000000
VERSION     DASRPQ010002358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1797
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1211218"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1766)
                     /locus_tag="VFD73_26600"
     CDS             complement(<1..1766)
                     /locus_tag="VFD73_26600"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HZI77546.1"
                     /translation="MTLTSTYDHRIIQGAESGEFLGIVDRLLQGGDGFYDAIAGSLQI
                     SVPAPTVSVQTPLPAPRPAEGAHDQVAPEMLYHVAAAMALVKAFRMHGHLAAHLDPLG
                     TEPLGDPALDPASLGLTPEIMAAIPSKVLRIAVPGATLAESLPYLQATYCGTMAYEIE
                     HISTHEERVWLREKIESGAHRKPLSPERQRWLLQRLTEVEALERFLHKAYLGQKRFSI
                     EGVDMLVPMLDLTIERAAESGARDVVLGMAHRGRLNVLAHTIGRPYETIFAEFEGGRQ
                     VEAGQLTPEGGTGDVKYHHGAEGAYVTSAGKAITVSLSPNPSHLEYVSPVVDGRARAK
                     QTQRRGREPHHDPTAALPVAIHGDAAFAGQGVVAETLNLGALKGYRTGGTLHLITNNQ
                     VGFTTDMEDARSTRYASDLAKGFDIPIIHVNADDAEACLSAVRLAMAYRDKFHQDVVI
                     DLVGYRRHGHNEGDEPAYTQPVMYERIRTLPTVREQYARALVQAGVISQEDADQQASA
                     AYQRLVDIQQAFKNSMGRAAPQERSVRLSGPGQEVDTALTPEFLRALNDQLHSWPENF
                     AVNPKLKRQLDRRRTAFDSEAG"
BASE COUNT          295 a          576 c          589 g          337 t
ORIGIN      
        1 atcccggctt ccgagtcgaa cgccgtccgc cgccggtcaa gctgacgctt caacttggga
       61 ttgaccgcaa aattttccgg ccagctgtgg agctgatcgt tgagtgcccg gagaaactcg
      121 ggagtcaggg cagtatcgac ctcctgtccc gggccgctga gcctgaccga ccgctcctgc
      181 ggggctgccc ggcccatgct gttcttgaac gcttgctgaa tgtcaaccag ccgctgatac
      241 gctgcagaag cctgctggtc agcgtcttcc tggctgatca ctcctgcctg cacgagggct
      301 cgagcgtact gctcccgcac ggtagggagc gtcctgatcc gctcgtacat gacgggttgg
      361 gtatatgccg gctcgtcgcc ctcgttgtga ccgtggcgcc ggtagccaac cagatcgatg
      421 acgacgtcct gatgaaattt gtcccggtac gccatggcca gtcgcacagc ggagaggcag
      481 gcttcggcat cgtcggcgtt gacgtggatg atgggaatgt cgaacccctt tgcgagatcc
      541 gacgcgtatc gggtcgacct ggcgtcctcc atgtcggtgg tgaacccgac ctggttgttg
      601 gtgatcaggt gcaaggtccc gccggtccga tagcccttga gcgcgccgag gttgagcgtc
      661 tccgctacca cgccctggcc tgcaaatgcg gcatcgccgt gaatcgccac aggtaacgcg
      721 gctgttggat cgtggtgcgg ctcgcggcca cgccgctggg tctgcttggc ccgggctcgg
      781 ccgtcgacca ctggtgagac gtactccaga tggctgggat tgggcgaaag gctcacggtg
      841 atcgccttgc ccgctgaagt gacgtaggcg ccttcggcac catggtggta tttcacgtcg
      901 ccggtgccgc cctctggcgt gagctggccg gcctctacct gccggccccc ttcgaactcg
      961 gcgaaaatcg tctcgtaagg gcgcccgatc gtgtgggcca gcacgttgag ccggccgcgg
     1021 tgggccatcc cgagtaccac gtcgcgggct cctgactccg cggcccgctc gatggtgaga
     1081 tcgagcatcg gcaccagcat gtccacgcct tcgatcgaga accgcttctg ccccagatac
     1141 gccttatgaa gaaatcgctc cagggcctcg acctcggtga ggcgctgcaa gagccaacgc
     1201 tgccgctccg gcgagagcgg tttccggtgg gcgccggact cgatcttttc ccgcagccag
     1261 acccgctcct cgtgagtcga gatatgctcg atctcgtacg ccatcgtgcc gcaataggtg
     1321 gcctggagat agggcaatga ctccgccagg gtggcacccg gcaccgcaat ccggagcacc
     1381 ttggatggaa tcgccgccat gatctccggc gtgagcccga gcgaggcggg atccagcgcc
     1441 ggatcgccca gcggctctgt ccccaacggg tccagatgcg cggccaggtg accgtgcatg
     1501 cggaatgctt tcaccagcgc catggcagcc gccacgtggt acagcatttc aggggcgacc
     1561 tggtcgtgtg ctccctcggc aggcctgggt gcgggcaacg gggtctgaac cgagacggtc
     1621 ggcgcaggga cggagatctg cagacttccg gcgatggcgt cgtaaaatcc atcgccgccc
     1681 tgaagcaggc ggtcgacaat gccaagaaac tcgccggact cggcgccctg gatgatgcga
     1741 tgatcgtagg tgctggtgag ggtcatgacc ttgctgacac cgagctcgcg gagccgc
//
LOCUS       DASRPQ010002359         1575 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2183780, whole genome shotgun sequence.
ACCESSION   DASRPQ010002359 DASRPQ010000000
VERSION     DASRPQ010002359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1575
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2183780"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..764)
                     /locus_tag="VFD73_26605"
     CDS             complement(<1..764)
                     /locus_tag="VFD73_26605"
                     /inference="COORDINATES: protein motif:HMM:NF014766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HZI77547.1"
                     /translation="MPLQRVELYELTLPLVEPFIISGGTMTHRRSLVVRLQDDEGNEG
                     WGESPPFELPFYSEETLAGARYLLQEVLIPRLFTAEVQSADAADPILRTGVRGNRFAR
                     AALDTALWDLEAARANTGLGQLLADRLGVTAAKTIACGVALGIPADRSLLTLARWVEA
                     AVGRGYQRVKIKVAPGWDAEPVRAVASVLEGTGLPLTVDANGAYEWPEHETNLRQLDQ
                     HDLLYIEQPLAPDELLGHVRLGDLLRTPICLDETLH"
     gene            complement(776..>1575)
                     /locus_tag="VFD73_26610"
     CDS             complement(776..>1575)
                     /locus_tag="VFD73_26610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77548.1"
                     /translation="YLELVRAAAEFTRSSTMVVVPSVKYHLPHLGEPFRAAEYRHTTE
                     QLARAWGSEPLPLEKDFSPTLAGDALADEKEQILRWLREVPQQIRQSVPTPVRLGLKL
                     MNARFDDRFQLEMLRASSSADALIVFNRLWDSAQGVAYGGYDLSERNLRVLQLARQAE
                     LATPALVGTGNVSSGRSILDYARLGCESVEIHTYFQLPLAEYPAIDGSRPQRALHALI
                     FHPADGLIAGMLQLESQGSLERQGGELRFLDLVNTSTSFAPRPAPSA"
BASE COUNT          287 a          524 c          507 g          257 t
ORIGIN      
        1 tcgtgcaacg tctcatccag gcagataggg gttcgcaaca ggtcacccag acggacatga
       61 cccagcagct cgtccggggc cagcggctgc tcgatgtaga gcaggtcgtg ctgatcgagc
      121 tggcgaaggt tggtctcatg ctcaggccat tcgtaagccc cgttcgcgtc taccgtcagc
      181 ggcaggccgg tgccttccag caccgacgct accgcgcgga ccggctccgc gtcccagccc
      241 ggcgccacct tgatctttac ccgctgatac ccacgcccca ccgcggcctc aacccaccgg
      301 gccagggtca ggagtgagcg gtccgctggg atgccaagtg ccacaccgca cgcgatggtt
      361 tttgccgcag tgaccccgag tcgatccgcc agcaactgcc ccaggccggt gttggcgcgg
      421 gccgcttcga gatcccagag cgctgtatcc agggccgccc gcgcgaaccg gttgccgcgt
      481 accccggtcc gaagaatcgg atcggcagcg tcggccgact gcacttccgc ggtgaagagt
      541 cggggaatca gaacctcctg cagcaggtac cgcgcgccgg ccagcgtctc ttcggagtag
      601 aacggtagct cgaacggtgg cgactctccc cagccctcgt tgccctcgtc gtcctgaagt
      661 cgcaccacga gggagcggcg gtgggtcatg gtgccgcccg agatgatgaa cggttcgacc
      721 agagggaggg tgagctcgta cagctcgact cgttgcagcg gcatcgattg gcccgttacg
      781 ctgacggtgc aggtctgggc gcgaacgagg tggaggtgtt caccagatcg agaaaccgaa
      841 gctccccacc ctgccgttcc agcgatcctt gcgactccag ctggagcatg ccggcgatga
      901 gcccgtccgc ggggtggaag atcagcgcgt gcaacgcccg ctgcggacgg gagccgtcaa
      961 tggcggggta ctccgcgagc ggcagctgga aataggtatg gatctcgaca ctctcacaac
     1021 cgaggcgagc gtagtccagg atcgaccgtc cggatgaaac gttgccggta cccaccagtg
     1081 ccggggtggc aagctccgcc tgtcgagcca gctgaagtac ccggagattc cgctcgctca
     1141 ggtcgtagcc tccataggcc acaccctgcg cgctgtccca cagacgattg aagacgatca
     1201 gcgcatcggc ggagctcgac gcgcgcagca tttccagctg aaagcggtca tcgaaacggg
     1261 cgttcatcag tttgagccca agccgcacag gcgtgggaac gctctgcctg atctgctgcg
     1321 gcacttcgcg aagccagcga aggatctgct ccttttcgtc ggcaagcgca tcgcccgcca
     1381 gcgtcggaga gaagtccttc tccaacggca gcggttccga tccccacgcg cgggcgagct
     1441 gctcggtcgt atggcgatac tcggcggccc gaaacggctc gccgaggtgg ggaaggtgat
     1501 acttcaccga gggcaccacc accatggtgc tcgagcgcgt gaactcagcg gccgcccgca
     1561 ccagctccag atatt
//
LOCUS       DASRPQ010002360         1141 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3447028, whole genome shotgun sequence.
ACCESSION   DASRPQ010002360 DASRPQ010000000
VERSION     DASRPQ010002360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3447028"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1141)
                     /locus_tag="VFD73_26615"
     CDS             complement(<1..>1141)
                     /locus_tag="VFD73_26615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77549.1"
                     /translation="TSGFLTEVEGLSGSSNGSWGPMFRELVRDGRADRVELGSGKAVW
                     VATERLAEVRAIHPAGERGMDSGPITREDAVRELLRGRLAITGPSTSEELANVLSIPQ
                     SDADVALAALEGEGVILRGHFTPEEPALEWCDRRLLARIHRYTLNRLRAEIEPVSAAD
                     FMRFLFAWQRLDSEHSVAGLEGLASLIAQLDGFELPAAAWESEVLSSRCNEYDPALLD
                     TLCVTGRVAWGRISADQRQGIAGPIKSTPIALFLREHADDWLGDRGEPEGQLSSYAQS
                     VHEALERRGASFFHELVVSSGLIPTQVEQALGELAGAGLVTSDSFAGLRALITPSNKR
                     KPLNAVRRKVRTAAYGIESAGRWSLLGGRAADAKNKEVRAAPELYA"
BASE COUNT          202 a          400 c          352 g          187 t
ORIGIN      
        1 gcgcatacaa ctccggcgct gctctcacct ctttgttctt cgcatccgct gcgcggccac
       61 ccagcaacga ccaccggccg gcgctctcga taccgtacgc cgctgttctg actttgcggc
      121 ggacagcatt cagcggcttc cgcttattgg agggtgtgat cagcgctcgc aggcccgcaa
      181 agctgtcgga cgtgaccagg cccgcgccgg ccaactcacc aagtgcctgt tccacctgcg
      241 tggggatcag ccccgacgat accaccagct cgtgaaagaa agaagcgccc cgacgctcca
      301 gcgcctcgtg gacgctttga gcgtagctgg agagctggcc ctctggctcg ccgcgatcgc
      361 ccagccaatc atccgcgtgc tccctgagga agagagcgat cggggtactc ttgattggtc
      421 cggcaatgcc ttggcgctgg tccgccgaaa ttctgcccca ggcaacccgg cccgtgacac
      481 agagagtgtc gagaagcgcg gggtcgtatt cgttgcagcg cgaggaaagg acctcacttt
      541 cccaggcggc ggcgggtagc tcaaacccgt cgagctgggc gatcagcgat gcgaggcctt
      601 ccagcccggc aacgctatgc tctgaatcca gccgctgcca ggcgaagagg aagcgcatga
      661 agtccgctgc actgaccggt tcgatttccg cccgcaaccg attgagggta tagcgatgaa
      721 tccgggccag gagccgccgg tcgcaccact ccagcgcggg ctcctcgggg gtaaagtgcc
      781 cccgcagaat cacgccctca ccctccagcg cggccaaggc cacatcggca tcggactggg
      841 gaatgctcag aacgttcgca agctcctcgg aggtgctcgg tccggtgatc gcgaggcggc
      901 ctcgcagcag ctcacgaacg gcatcttccc gcgtgatggg cccgctgtcc attccccgtt
      961 caccggcggg atgaatagcc cggacctcgg cgaggcgttc agtggcgacc cagacggcct
     1021 tcccgctccc gagctcgacc cggtcggcgc ggccgtcccg aaccagctcg cggaacatcg
     1081 gcccccagga accgttggag ctgcctgaca gcccctcgac ttcggtcagg aaccccgagg
     1141 t
//
LOCUS       DASRPQ010002361         1335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1552219, whole genome shotgun sequence.
ACCESSION   DASRPQ010002361 DASRPQ010000000
VERSION     DASRPQ010002361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1552219"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /locus_tag="VFD73_26620"
     CDS             complement(<1..228)
                     /locus_tag="VFD73_26620"
                     /inference="COORDINATES: protein motif:HMM:NF021387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050043 - lactate racemase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactate racemase domain-containing protein"
                     /protein_id="HZI77550.1"
                     /translation="MHTTLAFGKSGIPIDLPQGFAYRLLEARSATPLPDSRAALEAAL
                     DAPIASPPLADLARGKKSAAISVCDITRPAPN"
     gene            complement(449..1270)
                     /locus_tag="VFD73_26625"
     CDS             complement(449..1270)
                     /locus_tag="VFD73_26625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI77551.1"
                     /translation="MRLHLRQIGAVLRLELKKTFLSKRGWWVYLLALGPVALTMLHWL
                     VEMARHSGRHSIGEDTLVFAGLFHFYYLRLGIFFGCVGVFSNLFRGEMLEKTLHYYYL
                     TPIRREMLVAGKYLAGLVSATVLWVASTAISFLLIGRHFGASYNDYIFHGPGLGQLGS
                     YCLVAALACAGYGAVFLMSGLFFRNPMIPAAVVMVWENINPFLPTFLKKISVIFYLKS
                     LCPVEIPIPPPFNVMVIDADPPPFWLAVPGLLAVALILLVYAGLSARQTEISYTD"
BASE COUNT          245 a          345 c          512 g          233 t
ORIGIN      
        1 gttgggggcg gggcgggtga tgtcgcagac ggagatggcg gcgctttttt tgccgcgggc
       61 gaggtcggcg aggggcgggg aggcgatcgg ggcatcgagt gcggcttcta gtgcggctcg
      121 gctgtcgggg aggggggtcg cggagcgggc ttcgaggagt cggtaggcga agccttgggg
      181 gaggtcgatg gggattccgg atttaccaaa cgccagggtt gtgtgcatca gggccatcgt
      241 acatcgaaag ggggatttga aggatatggc tggggcggga ggctctcgga ggtcagcgag
      301 cttcgctcgc ttgtgcaggc caggaggcct gcaccacgtg ggcaggaggt ctttcgggat
      361 ggcgagctct cggggggtgg ggctcctgac ccggcttgtc agcgagcttc gctcgcgtat
      421 gtaggccagg aggcctacac cacgtgggtt agtcggtata gctgatttcg gtttggcggg
      481 cggagaggcc ggcgtagacc aggaggatca gggctacggc caggaggccg gggacggcca
      541 gccagaaggg cggcgggtcg gcgtcgatca ccattacgtt gaagggcggc gggatgggga
      601 tctctaccgg gcagaggctt ttcaggtaga agatgacgct gatctttttc aggaaggtcg
      661 ggaggaaggg attgatgttt tcccagacca tcacgactgc cgccgggatc atcggattgc
      721 ggaagaagag gccgctcatc aggaacacgg ctccgtatcc cgcgcaggcg agggcggcta
      781 ccaggcagta ggagccgagc tggcccaagc ccgggccgtg gaagatgtag tcgttgtagg
      841 aggccccgaa gtgacgcccg atcaggagaa aggagatggc tgtgctcgcg acccagagca
      901 cggtcgcgct gaccaggccg gccagatatt tgccggcgac cagcatctct cgacggatcg
      961 gcgtgaggta gtagtagtgc agcgtctttt cgagcatctc tccgcggaac aggttggaga
     1021 agacgccgac gcagccgaag aagatgccga gccgcaggta gtagaaatgg aagaggccgg
     1081 cgaagacgag cgtgtcctcg ccgatgctgt ggcggcccga gtgcctggcc atttcgacca
     1141 gccagtggag catggtgagc gccaccggcc ccagcgccag caggtagacc caccagccgc
     1201 gtttggagag gaacgtcttc ttcaattcca gccgcaggac cgcgccgatc tgccgcagat
     1261 gcagcctcat atggttcccc cttcgccgcc aatcaggtat tggtatacgg agttcacgtc
     1321 gtcgtccgcg ggcgc
//
LOCUS       DASRPQ010002362         1147 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3447447, whole genome shotgun sequence.
ACCESSION   DASRPQ010002362 DASRPQ010000000
VERSION     DASRPQ010002362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3447447"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..501)
                     /locus_tag="VFD73_26630"
     CDS             complement(<1..501)
                     /locus_tag="VFD73_26630"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HZI77552.1"
                     /translation="MGTLRATGFCALLTALLATSAFAQQAQTRQGFWIGGGMGYGSLG
                     LGCDGCGSVDREGGLSGYAKLGGTLRQNILLGVEFNGWTKSEGTGRVTMGNMSGAAYW
                     YPMPAQGLFIKAGAGYADLSVDDGISTSSDGGFGLLGGLGYDVRVGKNLSITPVANWF
                     RGAFSGG"
     gene            complement(691..>1147)
                     /locus_tag="VFD73_26635"
     CDS             complement(691..>1147)
                     /locus_tag="VFD73_26635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77553.1"
                     /translation="FSGSSLELGVGAGYEIALGKFHVCPQARTVLGFGPNKPFGAGED
                     RSSRSAQIGVAAGTLAGTIRQWQILPTFGLSYAYRKDQAQDDAGTMLFQISDHYALAQ
                     VGVGLVLRNLSIRPQLDLPLSFLNSNPSVGITVSYNFGRRIVTPKQPVP"
BASE COUNT          218 a          370 c          366 g          193 t
ORIGIN      
        1 accaccgctg aacgcgcccc ggaaccagtt ggccaccgga gtgatcgaca ggttcttccc
       61 gacgcgcaca tcgtagccga gtccgccgag cagcccaaag ccaccgtcgg acgaggtcga
      121 gataccatca tcgacgctca ggtcggcgta gccagcaccg gccttgatga agagaccctg
      181 ggccggcatc gggtaccagt atgcggcgcc cgacatgttg cccatcgtca cccggccagt
      241 accctcgctc ttggtccagc cgttgaactc gacgcccaga agaatgttct ggcgcaaggt
      301 gccgcccaac ttggcgtacc cgctcagccc accttcacgg tcgacactgc cacagccatc
      361 gcagccgagg cccagcgagc cgtagcccat gccgccgccg atccagaacc cttgccgcgt
      421 ctgcgcctgc tgggcaaagg ccgaggtggc cagcagtgcg gtgagcagcg cgcagaaccc
      481 agttgcccgg agtgtaccca tatcgcctct agaggttgga gagagagtgt gccccgtttg
      541 atggcggcga gcggtgcgag ggcaagttgc agaccagctt tggcgctgag cacaactcgc
      601 tgctggacaa agacgaagag cgtcagcttc gagttgtttc tcaggtccga ccggcggggc
      661 cgcatgcgat tcgcgcaagg gtctggctgc ttacggcacc ggctgcttgg gggtgacaat
      721 ccggcggccg aagttgtagc tcacggtgat tccaacactc ggattgctgt tcaagaatga
      781 cagcggaaga tcgagctgcg ggcgaatcga caggttccgc agtaccaggc ccacgcccac
      841 ctgggccagc gcatagtggt cggagatctg gaacagcatc gtcccggcgt catcctgagc
      901 ctggtccttt cggtaagcgt aggacagccc gaaagtggga agtatctgcc attgcctgat
      961 cgtaccggcg agggttccag cggccactcc gatctgcgca gagcggctcg agcggtcctc
     1021 gcctgccccg aacggcttgt tggggccgaa gcccaggact gtcctcgcct gggggcagac
     1081 gtggaatttt cccagggcaa tttcgtaccc ggctccgacg ccgagctcga gcgaggagcc
     1141 gctgaag
//
LOCUS       DASRPQ010002363         1049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1211870, whole genome shotgun sequence.
ACCESSION   DASRPQ010002363 DASRPQ010000000
VERSION     DASRPQ010002363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1211870"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..176)
                     /locus_tag="VFD73_26640"
     CDS             complement(<1..176)
                     /locus_tag="VFD73_26640"
                     /inference="COORDINATES: protein motif:HMM:NF014520.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WhiB family transcriptional regulator"
                     /protein_id="HZI77554.1"
                     /translation="MTEQFQLLLAEEADEELGWQERALCAQTDPESFFPEKGGSTREA
                     KKVCLACEVRSDCL"
     gene            808..>1049
                     /locus_tag="VFD73_26645"
     CDS             808..>1049
                     /locus_tag="VFD73_26645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77555.1"
                     /translation="MYSDVSIAGDPLALPHLLPPVPQHPSTVAEFAGLARAIAADRAH
                     WAPLVRYDATTRWYARLQTGPGYEVWLLSWLPGQTSG"
BASE COUNT          177 a          393 c          297 g          182 t
ORIGIN      
        1 tccaggcagt cggagcggac ttcgcaggcg aggcagacct tcttcgcctc gcgcgtggaa
       61 ccgccctttt cggggaagaa cgactcgggg tcggtctgcg cacacagcgc gcgctcctgc
      121 cagccgagtt cctcgtcggc ctcttcagcc agcagcaact ggaactgctc ggtcatgcgc
      181 gcccctcatc tgtcgtgctg tccccgtggt gcggccgtcc catgtgcggc tgaacgacac
      241 gagtgaaatt acaagtgtgc cgatccgggc cagtcaagcc gagatctgct attgggcccg
      301 ttattcactc cgctgaacca agaggtgaca gaaagtgttg atatctgcct aaacacatgc
      361 atccgtcaac cgtggtccgg cggagccacc gctcacacct cgtcagacgc tgcggcttcg
      421 cgcaccgttc cgcccgcccg ggtgaagcgt tgtggatcac attccgatca cagaagcaca
      481 acgcggaacg cgcttgtgag cggatgctgc accgcctatc cgcacacttc tgcgcacaaa
      541 cctttcacca atccatccgg ccggatcagg tgaaagattc gcgacatacc cgacatccag
      601 ttgacaaacg ctgtcctcga ccggtctcct ggacggcatg cccgctgagc acaacgcact
      661 catctggact cgccgccgcg agtcccgctg cgttgccctc gcgcagagct gttgtcgttc
      721 ctgttgttgc cgctgagtcc ccgccgggcc ctgtgacggc cctggcgcca ccccgccact
      781 cgcgcacacc caaggaacac atccttcatg tacagcgacg tctcgatcgc cggtgacccg
      841 ctcgccctgc cccacctgct ccccccggtg ccgcaacacc ccagcaccgt cgcggagttc
      901 gccggactcg cccgcgccat cgccgccgac cgcgcccact gggccccgct ggtccgctac
      961 gacgccacca cccgctggta cgcccggctg cagaccgggc ccggctacga ggtgtggctg
     1021 ctgagctggc tgcccggcca gacgagcgg
//
LOCUS       DASRPQ010002364         1435 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_587220, whole genome shotgun sequence.
ACCESSION   DASRPQ010002364 DASRPQ010000000
VERSION     DASRPQ010002364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1435
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_587220"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            184..>1435
                     /locus_tag="VFD73_26650"
     CDS             184..>1435
                     /locus_tag="VFD73_26650"
                     /inference="COORDINATES: protein motif:HMM:TIGR03803.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choice-of-anchor tandem repeat GloVer-containing
                     protein"
                     /protein_id="HZI77556.1"
                     /translation="MAMAAPAQTISVLHHFGTNEMGVYPQSPLVRGADGTLYGMTAAG
                     GALGQGQVFKFDPGGAGYTALKNFSHIDGAGASSVLLLSGQTLYGTTERGGLFDQGTI
                     FQVKTDGSGFDVLHHFSALNESDSGTFTNLDGAKPFAGLALAGGFLFGTAPEGGINGS
                     GTIFRLNPDGSDYTVLHAFSDFSSGTNAEGAVPYADLLFEAGYLYGTASIGGTHGVGT
                     IFRLQPDGSDWTVLHHFPALEAAPAGWTNSDGAWPSAGLVASGGVLYGNCHEGGPFAY
                     GTVYKLNPDGTGFSVLKSFDLLSEPAGPDGLLVAVGDTLFGVMASPDSFSGGVYRLHR
                     DGSGFAVIKSFSNWLYGAAPSRGLALVGSKLYGTTPDGGTFNYGTLFELSVDGSNFRV
                     LTNFSGGDGTVPQGGLAIAEDVFYG"
BASE COUNT          249 a          447 c          446 g          293 t
ORIGIN      
        1 ctgccataac ccgcaaacgg agtgactatg aatgcatcga cccgctggca gccgttcaga
       61 tcgacgaacg aaacgcagag aggcttgtcc cgttgtctcg gctggtcgcc tgcccccctg
      121 ccctacggcg cttcccacgg gtggagactc gtccctctct ggagcgctct gggtttgctc
      181 gccgtggcca tggccgcccc ggcgcaaacg atctctgtgc tgcatcactt cggcaccaat
      241 gagatgggcg tttaccctca gtcacccctg gtgcgagggg ccgacggcac actctacggc
      301 atgaccgcgg ccggaggagc gctggggcaa ggccaggtct tcaaattcga tccaggtgga
      361 gctggctaca ccgcgttgaa gaatttttcc cacatcgatg gcgcaggtgc gagttccgtc
      421 ctgctgctct caggccagac actctacggc accaccgagc gcggggggct gttcgaccag
      481 ggcaccattt tccaggtgaa gaccgatgga agcggtttcg acgtgctgca ccatttctcg
      541 gcgttgaacg agtcggatag cggaaccttc acgaacctgg acggcgcaaa acccttcgct
      601 ggtctcgcgc tggcgggagg attcctcttc ggcacagctc cggaaggcgg catcaacggc
      661 tccgggacca ttttccggct caacccggac ggcagtgact acaccgtcct gcacgccttc
      721 tcggatttca gctccggcac caacgccgag ggcgcggttc cgtacgcgga cttgctgttc
      781 gaagcaggct atctctatgg cacggcttcc atcggcggca cccatggtgt cggaaccatt
      841 ttcaggctgc aaccggacgg gagtgactgg accgtgctgc accacttccc ggccttggag
      901 gcggcgcccg cgggctggac gaattcggac ggagcctggc cctcggctgg cttggtcgca
      961 tcgggcggag tcctctacgg gaactgccat gaaggcggcc cgttcgccta cggcacggtt
     1021 tacaagctca atccggacgg cactggtttt agcgtcctca agtcatttga cctcctgagc
     1081 gagcccgccg gtcctgatgg tttgctcgtg gcggtcggag acacgctctt tggcgtgatg
     1141 gcgtcaccgg actcattcag cggcggggtt taccgcctgc accgggacgg cagtgggttt
     1201 gccgtcatca agagcttttc caactggctc tatggcgccg cgccatcgcg agggttggct
     1261 ttggtggggt ccaaacttta tggaacgacg ccggacggcg gcacatttaa ttacggcacc
     1321 ctgtttgaac tgagcgtgga cggctcgaac tttcgcgtgc tcaccaattt ttccggaggc
     1381 gatggaacgg tcccccaagg cggcttagcg atcgcagaag acgtatttta tggca
//
LOCUS       DASRPQ010002365         1344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2464029, whole genome shotgun sequence.
ACCESSION   DASRPQ010002365 DASRPQ010000000
VERSION     DASRPQ010002365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1344
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2464029"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..636
                     /locus_tag="VFD73_26655"
     CDS             <1..636
                     /locus_tag="VFD73_26655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77557.1"
                     /translation="NFWRRRVDGFEVLGEDQMRRLHDEAGIVRGRITLVRDGSPVAFR
                     DDDVAEPVPSELADSCVLLYSGNYGIAHEVETFVEGYRLHHREGTGRVRLWLSATGAG
                     AEEVAGRLAALGLPFHRSKPVPLERLAGLLKAPDAHLVVLKDSFVGFVMPSKIYACLG
                     SGKPLVFVGSADSDVDLLSRQSGVPYWRVSCGDPKGLSLALERLADRSVRS"
     gene            complement(851..>1344)
                     /locus_tag="VFD73_26660"
     CDS             complement(851..>1344)
                     /locus_tag="VFD73_26660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77558.1"
                     /translation="ATGDDRRGTLERAVAEQRTGSLQRTSTEQRAGAQQWTSTLQRAT
                     GLQRSPALQRTGTLKWTGAVDWACALERTAALQRTGSLNSIVVLQRSIALRVAAGDCP
                     GVGGIGPLQRTIFLRIGPLERTHRALRLLLSLLAVLLLPRPLRERNSSPEQYKRDGYT
                     LRF"
BASE COUNT          211 a          398 c          472 g          263 t
ORIGIN      
        1 aacttctggc gccgccgcgt cgatggtttc gaggtgctgg gcgaagacca gatgcgccgc
       61 ttgcatgatg aggcgggcat cgtccgcggc cggatcacgc tggtgcgcga cggctcgccg
      121 gtcgctttcc gggatgacga cgttgccgag cccgtaccgt ccgagctcgc cgattcctgt
      181 gtgctgctct actccggcaa ctacggcatt gcccacgagg tcgagacttt cgtcgagggc
      241 tatcggctgc atcaccggga aggcaccggg cgtgtgcggc tgtggctgag tgccacaggg
      301 gcgggagcgg aggaagtggc cggccgcctg gccgcgctcg gcttgccctt ccatcgctcc
      361 aaaccggtac cgctcgaacg attggcaggc ctgctaaagg cgcccgacgc ccatttggtc
      421 gttctgaaag attcgttcgt gggcttcgtg atgccgtcta agatttatgc gtgtctgggg
      481 tccggcaagc cacttgtttt cgtcgggagt gcagattctg acgtggacct actcagccgg
      541 cagtccggcg tgccctactg gcgagtgtcc tgtggcgacc cgaagggctt gagtctggct
      601 ttggaaaggc tggcggaccg atcggttcgg tcgtgagcca aaatgccgcc aagtccctgc
      661 tactgataca tttgtgagcc cggggccctg ctatccttct tggaatcgcg cggagatttc
      721 ggtattttga ctgcagattt gggtgggaac ccagactttt ctgtcggggc caagtctatt
      781 ggggatgtgc gcaccggggt agatcctata ctgccggctg gaatggatgg cctaaatgca
      841 tgagtttgca ttaaaagcgc agagtgtagc cgtcgcgttt gtactgctcg ggactggagt
      901 tgcgttcgcg caaggggcgg ggcagcagca ggaccgcgag cagactcaac agcagccgca
      961 aggcacggtg ggtccgctcc aaggggccaa tccgcaagaa aatggtccgt tgcagggggc
     1021 caatcccacc gacaccgggg caatcgccgg cagcgacccg cagggcaatg gaccgttgca
     1081 gaacaacgat gctgttcaag gagccggtcc gctgcagggc ggcggtccgc tccagggcgc
     1141 aggcccagtc gacggcgccg gtccacttca aggtgccggt ccgttgcagg gcgggggacc
     1201 gttgcaggcc ggtggccctc tgcagggtgc tggtccattg ctgggcgccg gcccgctgct
     1261 cggtgctggt ccgttgcagg gagccggtcc gctgctcggc gacggcccgc tccagggtgc
     1321 cgcgccggtc atcgccggtg gccc
//
LOCUS       DASRPQ010002366         1704 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_286002, whole genome shotgun sequence.
ACCESSION   DASRPQ010002366 DASRPQ010000000
VERSION     DASRPQ010002366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_286002"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..716
                     /locus_tag="VFD73_26665"
     CDS             <1..716
                     /locus_tag="VFD73_26665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77559.1"
                     /translation="PAVRTGRRTRRFYVGMAIAIATTVFVGFSHTYYLKAWYGSRELS
                     GLLHFHGLVFTTWVLFFVAQTTLVATGRTYLHRKMGVAGAVLAALVLTVGTTVAIIRV
                     RSAGSPIPGVPPLSFLAIPFFDMVVFGILVGSALYLRRTLEAHKRLMTLSMIALLPAP
                     IARMPFFLPLPPGPLTFFGLADLFIIPLLIYDVTSRGKVHPATIWGALLLVASQPLLL
                     MLSGTPAWLAFAGRITGLR"
     gene            863..>1704
                     /locus_tag="VFD73_26670"
     CDS             863..>1704
                     /locus_tag="VFD73_26670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77560.1"
                     /translation="MALPLQHPVIRGNGRGRGAIAPDVGWRERLQALKHLPKLLRMVW
                     AAEPKYVLGILVLRVARSAVPLAVLWIVKLIVDGVVHGIALHGRGEPIPWNRLALLIG
                     IELSIALVGEVLSRISALLESLLGDLFANQTSVELMRHAATLDLEQFENAEIYDKLER
                     ARRQTVGRIGLFTMLLATLQDLITLVSLSVALAVYVPWLLVLLVVAVLPSLLGETHFA
                     SLGYSLLFSWTPERRQLDYLRYIGASDISAKELKLFGLSDFLVGRYDRLSQEFYEANK
                     ALSVR"
BASE COUNT          236 a          577 c          529 g          362 t
ORIGIN      
        1 ctccggcggt acgaacaggc cggcgcactc gccggtttta cgtcgggatg gcgatcgcca
       61 ttgccaccac ggtgttcgtt gggttctccc acacctacta cctcaaggcg tggtatggga
      121 gccgggagct gagcggcctg ctccacttcc acggcctggt ctttaccacc tgggtcctgt
      181 tcttcgtggc ccagacgacg ctggtcgcaa ccggccggac ctacctgcat cgaaaaatgg
      241 gtgtcgccgg cgcggtgctc gccgcactgg tgctcaccgt aggaaccacc gtggccatta
      301 tccgggtccg gagcgcggga tctcccatac caggagtgcc tcccctctcc ttcctcgcga
      361 ttcctttctt cgacatggtg gtgttcggta tcctggtcgg ctcggcgctc tacctccgcc
      421 ggacactcga ggcacacaag cggctgatga cgctgtctat gatcgccctc ttacctgccc
      481 ccattgcgcg gatgcccttc ttccttccgc tgccccccgg accactcacg ttcttcggac
      541 tcgccgacct cttcatcatt cccctgttga tctacgacgt gacaagccga gggaaagtcc
      601 atcccgcgac gatctggggc gcgcttctgc tggtggcgtc gcagccgctc ctgctcatgc
      661 tttcagggac gccggcatgg ctcgcctttg ctggtcggat taccgggttg cggtaaggcg
      721 gtcgggcaag cggacaggtt aacgaggatt ccgtgggtcc ttccgtgccg cttccgtgtt
      781 ctccgtgttt ccgtggtaac ctattgctcc tttggtgcac cccgttcgcc tgaccgcctg
      841 accgcccgct tacctttaag gaatggctct cccactccag catcccgtca tccgcggcaa
      901 tggccggggc cgaggagcca ttgcgccgga cgtcggctgg cgggagcggc tccaggcgct
      961 caagcacctg cccaagctgc tccggatggt gtgggcggcg gagcccaagt acgtcctcgg
     1021 gatcctggta ctccgggtgg cgcgctccgc cgtgccgctg gcggtgctct ggatcgtgaa
     1081 gctcatcgtg gacggggtgg tgcacggcat cgcgctgcac ggacgcggcg agccgatccc
     1141 ctggaacaga ctcgccctcc tgatcgggat cgagctctcg atcgcgctgg ttggcgaagt
     1201 gctgagccgg atctccgccc tgctggagag tcttctgggc gacctgttcg ccaatcagac
     1261 cagcgtcgag ctgatgcgcc acgccgcgac cctggacctg gagcagttcg agaacgccga
     1321 gatctacgac aagctggagc gggcccgtcg gcagaccgtg gggcggatcg gcctcttcac
     1381 catgctgctc gcgacgctgc aggatctgat caccctggtg tcgctcagcg tggcgctcgc
     1441 ggtgtacgtg ccctggctgc tggtgctgct ggtggtcgcg gtgctgccct cgcttctggg
     1501 cgagacccac tttgcctcac tgggctactc gctcctcttt tcgtggactc ccgagcgccg
     1561 gcaactggat tatctccgct acatcggcgc gagcgacatc tcggccaagg agctcaagct
     1621 cttcggattg tcggactttc tggtgggccg ctacgaccgg ctctcccagg agttctacga
     1681 ggccaacaag gcgctctcgg tgcg
//
LOCUS       DASRPQ010002367         1640 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_904869, whole genome shotgun sequence.
ACCESSION   DASRPQ010002367 DASRPQ010000000
VERSION     DASRPQ010002367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1640
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_904869"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..941)
                     /locus_tag="VFD73_26675"
     CDS             complement(<1..941)
                     /locus_tag="VFD73_26675"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZI77561.1"
                     /translation="MAAYLLRRTAVSVVVLIGISMIVFLLLHLVYPSPGLDVLGIGAR
                     PVQVAAWNRDHGFTQPVVVQYWHYVDGLLHGDLGYSYKLNQSIASLFEERWARSLYLS
                     GTSLLLALLATVALGSYQAVRRRRLGDSVATGLEYTLYAMPDYVLYLLAIQVLAFTWP
                     VVPYQASQATSLLAVMADWRSMVLPITCSAMLITAGFSRYFRASALDILGMDYIKVTR
                     AKGLPERLVLSRHLLRNAFLPMITLIGLSIPALLAGNLIVETVFNYEGLGMLFTVSLQ
                     NEDYFVLLAYTLLGAVLTVLGNLLADITLMIADPQVRL"
     gene            1072..1443
                     /locus_tag="VFD73_26680"
     CDS             1072..1443
                     /locus_tag="VFD73_26680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77562.1"
                     /translation="MIDRSRPALVHAWLGAMYQDGAHGLIGWIDLDPAVRPPRDNGSR
                     DIEIVLETGALEHAPAGWAGYHAGQPGPPLVFLTPCERSPSRPPPRGMTVCPITVILR
                     TSFGLRETPGELQDRLCNRVR"
     gene            1433..1630
                     /locus_tag="VFD73_26685"
     CDS             1433..1630
                     /locus_tag="VFD73_26685"
                     /inference="COORDINATES: protein motif:HMM:NF044704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77563.1"
                     /translation="MSGSGGDSLNWSQRYKANLEKLASGNLVQVVEVVRDLAGREASR
                     GLSAGEKRMLAKARLILLQEG"
BASE COUNT          318 a          523 c          539 g          260 t
ORIGIN      
        1 aggcgcactt gcgggtcggc gatcatcagc gtgatatcgg ccagcaggtt tcccagtacc
       61 gtcagcaccg cgccgagcag cgtataggcg agcagcacga aatagtcctc gttctgcagg
      121 ctgacggtga acagcatgcc gaggccttcg tagttgaaga ccgtctccac gatcaggttg
      181 cctgctagca gcgccgggat cgacagcccg atcagggtaa tcatcggcag gaaggcgttg
      241 cggagcaggt gccgggacag caccaggcgt tcgggcaggc ccttggcccg tgtcaccttg
      301 atgtagtcca tccccaggat gtccagcgcg gacgcccgga aatagcggga aaacccggcg
      361 gtgatgagca tcgcggagca ggtgatgggc agcaccatgc tgcgccagtc ggccatcacc
      421 gccagcagcg aggtcgcctg gctcgcctga tagggcacga ccggccaggt gaacgccagg
      481 acctggatgg cgagcaggta cagcacgtag tccggcatgg catacagggt gtattccagg
      541 ccggtagcga cgctgtcgcc gagacggcgg cggcggaccg cctggtagct tcccagcgcg
      601 acggtggcaa ggagcgcaag cagcagcgag gtcccggaca ggtaaagact gcgtgcccat
      661 cgttcctcga acaagctggc tatactttga ttcagcttat aagagtagcc gagatcgccg
      721 tgcagcagcc cgtccacgta gtgccagtac tgcacgacca ccggctgggt gaacccgtga
      781 tcgcggttcc aggccgccac ctgcaccgga cgcgccccga ttcccagcac atccaggccg
      841 ggcgacggat agaccaaatg cagcagcaag aagacgatca tcgagatgcc gatcaagacg
      901 acaaccgata ccgccgtccg cctcagcagg taggcagcca cgccgggcct ccttcccagc
      961 ggagcccctg gccgtcgcgc agcactgact acgttaactc aggcgcgctg tcacagcctc
     1021 ggcctggctg cagatgagtg cgtaacttga agctcgcggg ataatgccct ggtgatcgac
     1081 cggagtcgcc ccgcccttgt ccacgcctgg ctgggcgcga tgtaccagga tggggctcac
     1141 ggcctgatcg gatggatcga cctcgacccc gctgtccggc cgcccaggga caacggcagc
     1201 cgggacattg agattgtcct ggaaaccggc gcgctggagc acgctccggc cggctgggcc
     1261 gggtaccacg ccggccagcc cgggccaccg ctagtcttcc ttaccccctg tgagcgcagc
     1321 ccgtcccggc caccgccacg cggcatgaca gtgtgtccga tcactgtcat cctgagaacg
     1381 agctttggtc tccgggagac tcccggagag cttcaagatc ggctgtgcaa tcgtgtccgg
     1441 tagcggcggc gattccctta actggtcgca acggtataaa gcgaacctgg agaagctggc
     1501 atcagggaat ctggtccagg tggttgaggt agtccgtgac ctggcaggac gggaggccag
     1561 ccgcggcctg tcggccgggg agaagcggat gctggccaag gcgcgcctca tcctgctcca
     1621 ggagggctga cccgctttat
//
LOCUS       DASRPQ010002368         4356 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1872582, whole genome shotgun sequence.
ACCESSION   DASRPQ010002368 DASRPQ010000000
VERSION     DASRPQ010002368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4356
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1872582"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            327..1427
                     /locus_tag="VFD73_26690"
     CDS             327..1427
                     /locus_tag="VFD73_26690"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HZI77564.1"
                     /translation="MRLDSGVYAAIRTEPLSLALNSNSLIIVRDSDVVVVDAQFTRAA
                     TQETLAAIRKLTRKPVGYVINTHWHDDHLAGDQVYQDSFPSVRFVMQENTAADLVKLG
                     APNRESQVEGIPSVVNRLEHLLSIGLGVDSTPVSPRERAALESAIGIALQYVNEAPRF
                     RAVTTTDTVHQRMTLGQGKNRIELFWFGYGNTRGDLVIWLSEQRIIATGDLVDAPVPL
                     AFNSYPASWVKVLDSLLALRPKTIVPGHGPVMHDVRYLRSVRQWLVRIAREASATALR
                     GDSLGSALTTITLDDVRRRVTGDEKWMNFLFRSFFVRPAVQAAFKEAGQVPPATTDQP
                     SRSMPATHPAPGSAADQSGPRDRPTLQEPSRP"
     gene            1626..2522
                     /locus_tag="VFD73_26695"
     CDS             1626..2522
                     /locus_tag="VFD73_26695"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HZI77565.1"
                     /translation="MKIGFIGLGSMGLPMARNLLDAGHELVVYNRTRSRADELGRKGG
                     RVAGSPREAAQSAKLLVTMLADDAAVEEVMLGDQGALAGLKSGAVHASMSTISHLLSR
                     RLAEQHRSKRQGYVAAPVFGRPEAAEAAKLWIIAAGETELIERCRPAFDAMGQGVEIV
                     GDDPPMANVLKLAGNFLLASAIEAMGEAFVLVQKSGIEPARFLEIVNGRLIRSPIYEN
                     YGKLIAERRWEPAGFKLRHGLKDVRLALAAAEEATAPMPLASLIHDHYLSAMARGWGD
                     IDWAALARVVEEDAGIGAESRV"
     gene            complement(2519..2962)
                     /locus_tag="VFD73_26700"
     CDS             complement(2519..2962)
                     /locus_tag="VFD73_26700"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030638 - polyketide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HZI77566.1"
                     /translation="MTPASTLISQQQLIDNAKAPLLGFNEKDWDAVRDSMPPGFVYDE
                     VPTGRRAEGVEEVVTLWQGWAEAFPDARATIDKELATSDTVVVEVTWRGTHRGALQTP
                     AGPIPASGKRIDIRACFVCDMSEGRVRQERHYFDMGTLLHQIGVS"
     gene            complement(3162..3314)
                     /locus_tag="VFD73_26705"
     CDS             complement(3162..3314)
                     /locus_tag="VFD73_26705"
                     /inference="COORDINATES: protein motif:HMM:NF023180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3309 family protein"
                     /protein_id="HZI77567.1"
                     /translation="MSTLLLVILVLLVLGALPTWPYSRSWGYYPSGGLGLLLLILLLL
                     FLTGRI"
     gene            complement(3452..>4356)
                     /locus_tag="VFD73_26710"
     CDS             complement(3452..>4356)
                     /locus_tag="VFD73_26710"
                     /inference="COORDINATES: protein motif:HMM:NF024893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AsmA-like C-terminal region-containing protein"
                     /protein_id="HZI77568.1"
                     /translation="DIPSAFKAFTTVQMLAPVAKYASGTVNTDLHLNGDLGKNMLPLF
                     KGLSGKGAVQTANIALHDFPAMNKLVEVTKLKILDNPTMQAIRTSFQIHDGRLFVDPF
                     PVKVGPITMQVAGSNGLDQSLQYALQLRVPRALLGGGANEAIAGLASKAGAAGIDIKT
                     APEIPLAAQLGGTVTNPSVKVDVGSLTSSVAQGASQAVKAAVTQKVDSAALRAVQAAE
                     QQAAAIRQQAESLASKVKLTGYQQADSLTSRAGNNPLLQAGAKVAADKLRKETDDKAA
                     GIIGEANKRADSLVAAAKRQAGVK"
BASE COUNT          767 a         1389 c         1405 g          795 t
ORIGIN      
        1 tggaactcgc ctcccttccg attcggtgta gctggacacc tgtctggatg ttgcctctac
       61 cggcgtagtg gcgcaagaag gacgggcggt cgggcggtca ggcggtcagg gagtgtttag
      121 aaaccgagtc attgcgaggg cacgaagtgc ccgtggcaat cccgctgcga cccgcgagga
      181 gctcggtccg ggtaaagcaa ctggaaacat cgttttcgcc ttcgcgtagt gtcccgatgc
      241 cttccgggcc tccagctgtt gcacattgta tcgcttgcac cctcgcggct gcgactgcga
      301 tcgttccatc tcccaacctg caactcgtgc gactcgattc cggcgtgtac gccgccatcc
      361 gcaccgagcc gctgagtctc gccctcaact cgaactcgct catcatcgtc cgcgatagcg
      421 acgtggtcgt ggtcgacgcg caattcaccc gggctgcaac tcaagagacc ctcgcggcaa
      481 tccggaagct cactcgcaag cccgtgggat atgtgatcaa cacccactgg cacgacgatc
      541 atctcgctgg cgatcaggtc tatcaggaca gctttccctc cgtccgcttc gtcatgcagg
      601 agaacaccgc ggccgatctg gtcaagctgg gcgcccccaa tcgcgagagc caggtggagg
      661 gaattccctc ggtcgtgaac cggttggagc acctgctctc gatcgggctc ggcgtcgaca
      721 gcacgccggt gtcgccgagg gaacgggcgg cgctcgagag cgcgatcggc atcgccctgc
      781 agtatgtaaa cgaggctccc cgatttcgcg ccgtcaccac gaccgacacg gtacaccagc
      841 ggatgaccct gggccagggg aagaaccgca tcgagctgtt ctggttcggc tacgggaaca
      901 cccgggggga tctcgtcatc tggctgtcgg agcagcgaat catcgcgacc ggagatctgg
      961 tcgatgcgcc ggttccgctg gcgttcaact cgtatccggc atcatgggtc aaggtgctgg
     1021 attcgctgct ggcgctgagg cccaaaacga tagtcccggg ccacgggccg gtgatgcacg
     1081 atgttcgcta tctccgctcg gtccggcagt ggctcgtgcg gatagcccgc gaggcctctg
     1141 caacagctct ccgcggcgac tcgctgggat ccgcgctgac gacgatcacc ctggacgacg
     1201 tgcgtcgcag ggtgactggg gatgagaagt ggatgaactt cctatttcgc agcttcttcg
     1261 tgaggcctgc tgttcaggca gcgttcaagg aagccggcca agtgccaccg gcaacgactg
     1321 atcagccgag tcggtcgatg ccagccacgc atcctgcacc tggatccgct gctgaccaat
     1381 ccggccctcg agatagacca accctgcaag aaccatcgag accgtgacca caaaggagaa
     1441 aaccagactc gcgatccgca tatgtcgctc caggctttcg attggcatgc aggctacagg
     1501 aagccggtca agtcacggtc aagtcagcac agcatctcac cctcgggcac ccgttgccgt
     1561 gtccccggtc acggctgcca gagtgaccgt gccggtgttt tgacactttc acctgggagc
     1621 agggtatgaa aatcggtttc attggcctgg ggagcatggg gcttccaatg gcccgcaatc
     1681 tcctggacgc cggccatgag ctggtggtct acaaccgtac ccgaagccgg gccgacgagc
     1741 ttggcaggaa aggtgggaga gtcgcggggt cgccgcgcga agccgcgcag agtgccaagc
     1801 tccttgtcac aatgctggcc gacgatgccg ccgtggaaga ggtgatgctg ggcgatcagg
     1861 gtgcgctggc aggactgaaa tcaggcgcgg tgcacgcgtc gatgagcacg atcagccatc
     1921 tgttgtcgcg tcgcctggct gaacagcacc gatcaaagcg gcagggctac gtcgctgcac
     1981 cggtgttcgg ccggcccgaa gccgcggaag cggccaagct ctggatcatt gctgcgggag
     2041 agaccgagct catcgagcgc tgccggccgg cgttcgacgc catgggtcaa ggcgtggaga
     2101 tcgtggggga cgatccaccg atggcaaacg tgctcaaact cgcgggaaac tttctcctgg
     2161 cctcggcaat cgaggcgatg ggcgaggcgt tcgtgctggt gcagaagtcc gggatcgagc
     2221 cggcccgttt tctcgagatc gtgaacggcc ggctgatccg atcaccgatc tacgagaact
     2281 atggtaagct gatcgccgag cggcgctggg agccggccgg attcaagctg cgccacggac
     2341 tcaaggacgt gcgactggcg ctagctgcag ccgaggaagc caccgcgccg atgcccctcg
     2401 cgagcctgat tcacgatcac tacctctcag ccatggcccg cggctgggga gacatcgact
     2461 gggcggccct tgcgcgggtg gttgaggagg acgccgggat cggcgcggag tccagggttt
     2521 agctgacgcc gatctggtgc agcagcgtcc ccatatcgaa gtagtggcgc tcctggcgca
     2581 cgcggccctc gctcatgtcg caaacgaaac aggcgcggat gtcgatccgc ttgccgctcg
     2641 ccggaattgg accggcggga gtctgcaggg ctcctcgatg agtgccgcgc caggtgacct
     2701 cgacgacgac cgtatcgctc gtcgccaact ccttatcgat ggtcgccctt gcatcgggga
     2761 acgcttcggc ccagccctgc cagagggtga cgacctcttc gacgccctcg gcgcgtcgtc
     2821 cggtcggcac ctcgtcgtag acaaatccgg gtggcatgga gtctcgtacc gcgtcccagt
     2881 ctttctcgtt gaagccgaga agcggggcct tggcgttatc gatgagctgc tgctgagaga
     2941 ttagggtaga tgcgggagtc atggggtcct ccgtggtggg gctggcggtc gatccgtcgg
     3001 gcgggcgggc ggtcagttct tcgcttcacg cagccggagg ggagcatttc gcccagccgc
     3061 tcagaaggcg agaatatggg atacagtacg gaagctggca atccggttgc gtccactccg
     3121 ggaccgccgc agcggcttcg ccgcctcgta atgacgccgg cctagatcct tccggtgaga
     3181 aacagcagca gcaaaatgag aagcagcagt cccaggccgc cgctcgggta gtagccccag
     3241 ctcctgctgt atggccaggt tggcagcgca ccgagcacga gtagcaccag aatcacgagc
     3301 agcagagtcg acatcggtcg cctcgttgtg gtgggaaggg gagaagatag tgcgaggggc
     3361 gctggtcggt gagatggtag gacaatcgca acctaaccct acaccgcccc cctctccgac
     3421 cgaccgaccc tccgaccctc cgaccgcccg cctactttac gcccgcctgc ctcttcgccg
     3481 ccgccaccag actgtcggct cgcttgttcg cctcgccgat gatgccggcg gctttgtcgt
     3541 cggtctcctt ccgcagcttg tcggcagcta ctttggcccc cgcctggagc agcgggttgt
     3601 tccccgccct cgaggtgagg gagtccgcct gctggtagcc ggtgagcttc accttcgagg
     3661 cgagcgactc cgcctgctgc cgaatcgccg cggcctgctg ttccgccgcc tgcactgctc
     3721 ggagcgcggc ggagtcgacc ttctgggtga ccgccgcttt caccgcctga ctcgccccct
     3781 gcgccaccga tgaggtcagg ctcccgacgt cgaccttgac ggagggattg gtcaccgtgc
     3841 cgccgagctg ggccgccagc ggaatctccg gcgccgtttt gatgtctatg cctgccgcac
     3901 cagccttcga cgccagaccc gcgatggcct cattggcacc gccgcccagc agggcgcggg
     3961 gaacccggag ctgcaaggcg tactggagcg attggtctag gccattggaa ccggcgacct
     4021 gcatggtgat cggtcccacc ttcaccggga acggatccac gaacaaccgc ccatcgtgga
     4081 tctggaagct ggtgcggatc gcctgcatcg tcgggttatc cagaatcttg agcttggtga
     4141 cttccaccag cttgttcatc gcgggaaaat cgtgcagcgc gatgttggcg gtctgcaccg
     4201 caccctttcc gctgagcccc ttgaagagcg gcagcatgtt cttccccagg tcaccattca
     4261 ggtggagatc ggtgttcacc gtgcccgagg catacttcgc caccggcgcc agcatctgca
     4321 cggtggtgaa cgccttgaac gcggagggga tgtcga
//
LOCUS       DASRPQ010002369         1026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_287257, whole genome shotgun sequence.
ACCESSION   DASRPQ010002369 DASRPQ010000000
VERSION     DASRPQ010002369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_287257"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..306)
                     /locus_tag="VFD73_26715"
     CDS             complement(<1..306)
                     /locus_tag="VFD73_26715"
                     /inference="COORDINATES: protein motif:HMM:NF024736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI77569.1"
                     /translation="MLTRMTDEDWATVLEVFRACRSRRGAKGRNDRIFLEAVHYFCVH
                     NITWRALPAACGNWNSVWKRFWRLSQAGVFEAFFDALAAMSQTAHLVQMFDSTVVRAH
                     "
     gene            complement(401..>1026)
                     /locus_tag="VFD73_26720"
     CDS             complement(401..>1026)
                     /locus_tag="VFD73_26720"
                     /inference="COORDINATES: protein motif:HMM:NF042805.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF6781 family protein"
                     /protein_id="HZI77570.1"
                     /translation="EPSGSTGEPAVNEEQAIRDQVRAVTSQVLQQGWVDPDALREVVR
                     TLAGQPAGLAAPSRAEAREHFAEVVKSLDEALQTSAAATHEALQRLASRGADYTDNDL
                     KDALASLRKLEEGYVAATSCIAQALSDNWRGEVTGLVAHAQELGADASARVAAMVGEV
                     GSRMGESAASGLDAVRGASARLTLLASGMLAGVADALRDQNQTKKGN"
BASE COUNT          168 a          384 c          296 g          178 t
ORIGIN      
        1 gtgcgcccgc acgacggtgg agtcgaacat ctgaaccaag tgggccgtct ggctcatcgc
       61 cgcgagggcg tcgaagaagg cctcgaacac cccggcttgg ctcaagcgcc aaaagcgctt
      121 ccacactgaa ttccagttcc cgcacgcggc cggcagagcg cgccacgtga tgttgtgaac
      181 gcagaagtaa tgcaccgctt cgaggaaaat ccggtcgttc cggcccttgg cgcctcgccg
      241 ggagcggcag gcccggaata cctccagcac cgtcgcccaa tcctcgtctg tcatccgcgt
      301 cagcatggtc ggctcctccc aaaccgacct gcccagtgtc acagatccac gaaggtggga
      361 atccactcac tacatactca gcccaatccg tccacacggc ctagttgccc ttcttggtct
      421 ggttctgatc gcgcagcgca tccgcaaccc cggccagcat gccactggcc agcagggtca
      481 ggcgagccga tgccccccgc accgcgtcca gccccgaggc agcactttca cccatccggc
      541 tcccaacctc gcccaccatg gcggcgaccc gtgcgctcgc gtcagcgccg agctcttggg
      601 cgtgtgcgac caggcccgtc acttcgccgc gccagttgtc gctgagcgcc tgggcgatgc
      661 agctggttgc cgccacatag ccctcctcca gcttcctcaa gctggccagc gcgtccttca
      721 ggtcattgtc ggtgtaatct gcccctcggg acgcgagccg ctgaagcgcc tcgtgcgtcg
      781 cagccgcgga tgtctggagc gcttcgtcca ggctcttcac gacttcagcg aagtgctcac
      841 gcgcctcggc ccggctcggg gccgcaaggc ccgccggctg accagccaaa gtgcgaacca
      901 cctcgcgcag ggcgtccgga tcaacccagc cctgctggag aacctggctc gtcacggccc
      961 tgacctggtc tcggatggcc tgctcttcgt tgactgcggg ttctcccgta gatccacttg
     1021 gctcgc
//
LOCUS       DASRPQ010002370         1052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_588716, whole genome shotgun sequence.
ACCESSION   DASRPQ010002370 DASRPQ010000000
VERSION     DASRPQ010002370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_588716"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..462
                     /locus_tag="VFD73_26725"
     CDS             <1..462
                     /locus_tag="VFD73_26725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77571.1"
                     /translation="GPEDSSGSALSVSGDLRVSGRMRDNSLRSQVAAGNQIATTTNGW
                     LDVPNMSVSINLPATAQVLITFHMPGVQITGTTNGAGNYRIVVDGTQYAFTRNEWNNN
                     GWELRSVYLNRLLSLGAGSHTITAQWWCANGGTLTGCWYSDTRTLTVIEYS"
     gene            477..983
                     /locus_tag="VFD73_26730"
     CDS             477..983
                     /locus_tag="VFD73_26730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77572.1"
                     /translation="MYVVIDKKSKTILHMVNSRPGEDRKPEDVYPGFDPKTMELGRAE
                     EQYIPAKFTIEHGKVKSLEPEPPPPKEPTAAEELASLKEAKLAEISRQAFEQRAKLIP
                     DHELTNAALGIYDEDREDMIRETVKAFRAEYHRLETVIHKARSKKELESMVAKFPTKP
                     VGHSGKER"
BASE COUNT          229 a          331 c          351 g          141 t
ORIGIN      
        1 ggccccgagg acagctccgg ctccgcgctg tcggtgagcg gggacctccg ggtctccggt
       61 cgcatgaggg acaactcgct ccggagccag gtcgccgccg ggaaccagat cgccaccacc
      121 accaacggct ggctcgacgt gccgaacatg agcgtgtcga tcaacctgcc ggccaccgcg
      181 caggtgctga tcacgttcca catgccgggc gtccagatca ccggcaccac gaacggtgcg
      241 ggtaactacc ggatcgtcgt ggacggaacc cagtatgcgt tcacccggaa cgaatggaac
      301 aacaacggct gggagctgag gagcgtgtac ctgaaccggc tgctctccct cggtgccggg
      361 agccacacca tcaccgccca gtggtggtgc gccaacggcg ggacgctgac cgggtgctgg
      421 tacagcgaca cccggacgct caccgtgatc gagtattcgt aaacaggaga tctgcgatgt
      481 acgtcgtcat cgacaagaag tccaagacca tcctccatat ggtgaactcc cgtccgggcg
      541 aggatcgcaa acccgaggac gtgtatccgg gcttcgatcc gaagaccatg gagctggggc
      601 gggccgagga gcagtacatc ccggcgaagt tcaccatcga gcacggaaag gtgaagtcgc
      661 tcgagccgga gcctcccccg cccaaggagc ccaccgcggc ggaggagctg gccagcctga
      721 aggaggccaa gctggcggag atctcccgcc aggcgttcga gcagagggcc aagctcattc
      781 ccgatcacga gctgacgaat gccgcgctcg ggatctatga cgaggatcgg gaggacatga
      841 ttcgagagac ggtgaaggcg ttccgggccg agtaccaccg cctggagacc gtcatccaca
      901 aggcccggtc caagaaggag ctggaatcga tggtggccaa gttcccgacc aagccggtcg
      961 gccactccgg gaaagagcga tgagagaaca gctccagagg cgactggagg agctgcgggc
     1021 cgagtaccag aagggccaaa ccgccgcgga gg
//
LOCUS       DASRPQ010002371         1114 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2465679, whole genome shotgun sequence.
ACCESSION   DASRPQ010002371 DASRPQ010000000
VERSION     DASRPQ010002371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2465679"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..236)
                     /locus_tag="VFD73_26735"
     CDS             complement(<1..236)
                     /locus_tag="VFD73_26735"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI77573.1"
                     /translation="MHTVLVVEDDPALRALMARTLAAKGYRALEASDGIEALEQLAQE
                     PDIELVVTDIVMPRMNGVELAQQLIASARTRLLFV"
     gene            complement(471..815)
                     /locus_tag="VFD73_26740"
     CDS             complement(471..815)
                     /locus_tag="VFD73_26740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77574.1"
                     /translation="MGDTLICEKSRRFQTAKGERWLWVRVLRERNAGRKDADRTLAEA
                     VVSTDAGGKMSDQKVELAGISLDGQADYTLRNTTGVRTAEPRESPRQAHRARAYTRGP
                     DMGPLDLSCGGG"
BASE COUNT          196 a          368 c          319 g          231 t
ORIGIN      
        1 acgaacagga gtcgcgtgcg tgccgaggca atgagttgct gggccagctc gacaccgttc
       61 atccggggca tcacaatatc ggtgacgacc aattcgatgt cgggctcctg tgccagttgt
      121 tccagcgcct ctatcccgtc gctcgcctcc aatgcccggt agcctttcgc ggccagggta
      181 cgcgccatca gagcgcgtaa ggcgggatcg tcttcgacaa caagcacggt gtgcatgatc
      241 ggcagccagc agagggagtc ttaggatacg actctgtccg ccttccggct agggtgtcca
      301 aacccaagag caccgcgccg gatgtctcat aaccattcag cacagtgctc tgtcggcggc
      361 agcgcaggcc tcaattcggg agactcgccc tcactcccct gcgccaccca ccctttgtag
      421 ttataccttc acccggccat cgctgcggtg atgaccagca ccgtgccgcc ctaacctcct
      481 ccgcagctga gatccagcgg tcccatatcc gggcctctgg tataggcccg ggcgcggtgg
      541 gcctgcctgg ggctctctct cggctctgct gtccgaacac ctgtcgtgtt gcgcaaggtg
      601 tagtctgcct gcccatccag cgagatgcct gccagttcta ccttctgatc ggacatcttc
      661 ccgccggcgt cggtggacac caccgcttca gccagggtgc gatcagcgtc cttccgtccg
      721 gcatttcgtt ctctgagaac ccgtacccag agccagcgct cacccttcgc ggtctggaag
      781 cggcggctct tctcgcagat cagtgtatca cccacgacgg ttgagcttct cagaatcggt
      841 ctcgactctg gagggactcc ttcccgcgat gtactcagtg cgacattcgg attcgctgtg
      901 tttgtgctgc aggccagagc cagcgcggat acgacataga ggatcaggtg tcgcccagtg
      961 tcttcggtgt accccataag cacctcgatc gagcaggaga cgcgcacagt cgccctggag
     1021 cctagggtca agcggtgacc ggaatcaccc ttgttgcacc gcagtatttg gcacgaccgc
     1081 agcgtgggca gccgggacct cgaggattat ctta
//
LOCUS       DASRPQ010002372         2831 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4041691, whole genome shotgun sequence.
ACCESSION   DASRPQ010002372 DASRPQ010000000
VERSION     DASRPQ010002372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2831
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4041691"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="VFD73_26745"
     CDS             complement(<1..263)
                     /locus_tag="VFD73_26745"
                     /inference="COORDINATES: protein motif:HMM:NF022963.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3224 domain-containing protein"
                     /protein_id="HZI77575.1"
                     /translation="MTARAEGTFTVASWSEDTYSELDGKGKLTKATVGYRLSGGIEGE
                     ASWEALMFYRADGTAEYTGLQHVSGQIGGRSGTCVMIADGSYA"
     gene            complement(668..892)
                     /locus_tag="VFD73_26750"
     CDS             complement(668..892)
                     /locus_tag="VFD73_26750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77576.1"
                     /translation="MSVPGADTSQVQIDEAARQLELAIHDARVAFDCIQLGELDRAHT
                     SAITARTAADAAETLLRAALGQGGRALDES"
     gene            1425..1625
                     /locus_tag="VFD73_26755"
     CDS             1425..1625
                     /locus_tag="VFD73_26755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77577.1"
                     /translation="MPGANQAYAPVVQAKQGASKSKLMRLFEEIAIPVAKEIGKAGAQ
                     AAFGQQPSWQGSTWQQSSWGQW"
     gene            1580..2230
                     /locus_tag="VFD73_26760"
     CDS             1580..2230
                     /locus_tag="VFD73_26760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77578.1"
                     /translation="MAGLDLAAVVLGAMVIGPLKDLLVEQITITGMTEDLRGRDQDLS
                     PDDAEALAEVLVPFIRSMPDALAWAIAMSKDRRCGRAVAFGTGSVLHYVFDEEDLLPE
                     ATFGAVGLIDDAFLVHTFVRHVHEAFPFVSPEVAYEPPALSAIELVAALLPEGVAAAL
                     LRTCKGLIQVAAALFTAPVEIDSDDGVVAHSLRTRTAAQALRAVEQPTAVAGGAPG"
     gene            2556..>2831
                     /locus_tag="VFD73_26765"
     CDS             2556..>2831
                     /locus_tag="VFD73_26765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77579.1"
                     /translation="MPEFMPTELLPLGADTTEYRQLTGEGVTARQAFGREFIEVAPEL
                     LILLAREGMRDIAHLLRPGHLRQLRAILDDPEASPNDRYVARDLLQNA"
BASE COUNT          483 a          955 c          899 g          494 t
ORIGIN      
        1 tcggcgtagc tgccgtcggc gatcatgacg cacgtgccgg accgcccgcc gatctggccc
       61 gatacatgct gcaggccggt gtactcggcg gtgccgtcag cgcggtagaa catgagcgcc
      121 tcccaggaag cttccccctc gatgccgccg ctgagccggt agccgaccgt ggccttggtg
      181 agcttcccct tgccgtcgag ctcggagtag gtgtcctccg accaggacgc gaccgtgaac
      241 gtgccctccg cccgtgccgt catcgcctgc tccttcctca gatagatgtg tgagtcacac
      301 actaatctag tgccgggaag aggcgagtgc tggggagggc gcgagagagg gcgccaagga
      361 gctaatccac ctcaggcgca gggcgatctt ccgtccgctg tgtccactgg gcaaggttgc
      421 cgcgggtagt cagggcgtcg gggtgctccg gaccagacac ccgcgatcgt cgacgacaca
      481 taaaccctgg ccatcacgcc acccctaggc cggctcaccc ccgtgatcta accttcgcac
      541 ggcacagccc gcccggccac ccacagcggg ccggtgaatc ttcggaggcc ttggcccggg
      601 atcaggccgg ccgggatcag gccggccccg gatcaggctg gcccgggatc aggccaagcc
      661 ccggtaatca ggactcgtcg agcgcgcggc cgccctgacc cagcgcggcg cgcaacaggg
      721 tttcggcggc atcggcagcc gtgcgcgcgg tgatcgcgct ggtatgggcc cggtcgagct
      781 cacccagctg aatgcagtca aaggcgacgc gggcatcatg gatcgcgagt tccagttgcc
      841 ttgctgcctc atcgatttgc acctgactgg tgtctgcccc gggaacgctc attggccgcc
      901 atccttacct gtgcaccggg cccgtgccgc tgttggtcat ccaggttccc cgcatgatcg
      961 ctgccatgca tgcccgtcac ccggcccggc acgggaccta ccataaaccc gacttcggcc
     1021 aaactagtgc gcaagtcacc gacctgctac caagatcaaa cccagaatgt gaccgaagtc
     1081 aggtctcgac gcaggtaaga aaagccacga tgatgtatct gcgggccgag gcacttctct
     1141 ggttcactag tgggccgcgc tgggcggcgc agatcgtcgc gacaccagag ggccatagcc
     1201 gtcgacccaa gggaggggtc gtgctataca cacagtgcgc attctgcagc tcgatcggac
     1261 cgctgatgtg tgcgggaacg ctgatgccac acatgcctgt cgcgacagtg aggacgccat
     1321 acggcgccgt ctgccctggc tgcggcagcg ttatgaccgg attcctctgc ccgcattgca
     1381 tgacacagca gtaccttctc ctgccggggg cgtcggcgcc agcgatgccc ggggctaacc
     1441 aagcgtatgc accggtcgtc caggccaagc agggcgcgtc aaagtccaag ctcatgcgcc
     1501 tgttcgagga aatagctatt ccggtcgcca aggagatcgg caaggcgggg gctcaagcgg
     1561 ccttcgggca gcaaccgtca tggcagggct cgacctggca gcagtcgtct tgggggcaat
     1621 ggtgatcggg ccgttgaagg atctgctggt cgagcagatc acgatcactg gaatgaccga
     1681 ggacctccgc ggccgggacc aggatctctc gccggacgac gccgaggccc tcgccgaagt
     1741 tcttgtaccc ttcatccgta gtatgccgga cgcgctcgcg tgggcaatcg cgatgtcgaa
     1801 ggacagacgc tgtggccgag ccgtggcctt cggtaccggt tcggtactcc actacgtctt
     1861 cgacgaggag gaccttctgc cggaggccac tttcggcgct gtgggcctga tcgatgacgc
     1921 cttcctcgtg cacacgttcg tcaggcatgt ccacgaagca ttcccattcg tctctcctga
     1981 ggttgcctac gagccgccag cgctgagcgc gatcgagttg gtcgctgcac tgctccccga
     2041 aggggtggcg gccgcgctac tacgcacctg caaaggtctc attcaggtcg ccgcggcatt
     2101 gttcacggct cctgttgaga tcgactccga tgatggtgtt gtcgcgcact cccttcggac
     2161 ccggaccgcg gcgcaggccc tccgggcggt tgagcagccc acggcagtgg ctggcggcgc
     2221 gccgggctga ccccgtcatt tcacccgggt cggagggctg tgcgggcgtg cctaacgtaa
     2281 gagtgctcct gagctcaccc agctggaggc agtcgaaggc gacccgggca tcatggatcg
     2341 cgagttccag ttgccttgct gcctcgtcga tttgcacctg accggtgtct gccccggaaa
     2401 cgctcattgg ccgccatcct tacctgtgca ccgggcctgt gccggtgttg gtcatccagg
     2461 ttccccgcat gatcgctgcc aagcatggcc atcacctggc ccggcacggg acctaccata
     2521 aagcgtccgg ccccaccgca cgaggaagtg cctaaatgcc cgagttcatg cccaccgaac
     2581 tgctgccgct tggtgcggat accacggaat accgccagct caccggggag ggggtcacgg
     2641 cacgccaggc gtttggcaga gaattcatcg aggtggcgcc ggaactcctc atcctcctgg
     2701 cccgcgaggg catgcgggac atcgcgcatt tgctgcggcc cggccacctg cgccagctac
     2761 gggccatcct ggacgacccc gaggcctccc ccaacgaccg gtacgtcgcc cgcgacctac
     2821 tgcagaacgc a
//
LOCUS       DASRPQ010002373         1093 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2186902, whole genome shotgun sequence.
ACCESSION   DASRPQ010002373 DASRPQ010000000
VERSION     DASRPQ010002373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2186902"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..379)
                     /locus_tag="VFD73_26770"
     CDS             complement(<1..379)
                     /locus_tag="VFD73_26770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77580.1"
                     /translation="MHSKLWRAGLVIALVTTNGETLLGQAAHDPSDPVTTDPAIVDTA
                     YPPTTAELAFPSHGSRLNGFMYLAQGKGPHPTVVLLHGFPGNERNLDLAQAFRRAGMN
                     VLLFSYRGAWSSAGTFSFANALED"
     gene            469..1092
                     /locus_tag="VFD73_26775"
     CDS             469..1092
                     /locus_tag="VFD73_26775"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HZI77581.1"
                     /translation="MTPLTFQLWALLASFVAGLVGSLLGLGGGIIIIPVLTLWLHIDI
                     RYAIGASIVSVIATSSGAAATYVRERLANLRVAMVLEIATTTGAMSGALLAGHMATRW
                     LYLIFGGVMGYSSVMMFRKMGSGSDRSTRPAPWADRLRLHSSYYDEALGREIAYRVVS
                     TRIGLALMYGAGIVSGLLGIGSGRSRYQRWISQWLCRSRCLPPPATS"
BASE COUNT          190 a          329 c          361 g          213 t
ORIGIN      
        1 catcctccag ggcgttggca aacgagaagg tgccggcact gctccaggcg ccccggtagc
       61 tgaacaagag cacgttcatt ccggcacgcc gaaacgcctg cgccaagtcc aggttccgct
      121 cgtttccagg aaacccgtgc agcaggacga cggtcgggtg aggacccttg ccttgggcca
      181 ggtacatgaa cccattgagc cgagatccat gactcgggaa ggcgagctcc gcagtggtcg
      241 gtggatacgc agtgtcgacg atggccggat cggttgtgac cgggtctgag ggatcgtgag
      301 ctgcttgacc gagcaaggtc tcaccgttgg tggtaaccag ggcaatcacg agccctgctc
      361 tccaaagttt gctatgcacg gcgagaagaa tagcgggttc aggcgttctg cccagcaccg
      421 gcggcggcag cagacgtaca tcgctcgatc cccttacttt gtggcgacat gactcccctc
      481 accttccagc tctgggcgct gctcgcgtcc tttgtcgcgg ggctggtcgg ctcgctcctg
      541 ggactcggcg gtgggatcat catcatcccg gtgctgacgc tctggctgca catcgatatc
      601 cgctatgcca ttggagcatc gatcgtatcg gtcatcgcga cctccagcgg ggccgcggct
      661 acctacgtgc gggagcgact ggcgaacctg cgggtcgcga tggtactgga gatcgccacg
      721 accactgggg cgatgagcgg agccctcctc gccggccaca tggctacccg ctggctctac
      781 ctgatcttcg gtggcgtgat gggctactcg tcggtgatga tgtttcgcaa gatgggaagc
      841 ggctcagacc gatcgacccg cccggcaccg tgggccgatc gcctgcgact gcacagcagt
      901 tattacgacg aggcgttggg gagggagatc gcgtatcggg tggtgagcac ccggattggc
      961 ctggcgctca tgtatggtgc gggcatcgtc agcgggttgc tcggcatcgg gtcggggcgc
     1021 tcaaggtacc agcgatggat ctcgcaatgg ctctgccggt caaggtgtct accgccacca
     1081 gcaacttcat gat
//
LOCUS       DASRPQ010002374         1132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2187220, whole genome shotgun sequence.
ACCESSION   DASRPQ010002374 DASRPQ010000000
VERSION     DASRPQ010002374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2187220"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(65..817)
                     /locus_tag="VFD73_26780"
     CDS             complement(65..817)
                     /locus_tag="VFD73_26780"
                     /inference="COORDINATES: protein motif:HMM:NF033580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZI77582.1"
                     /translation="MPFYPAPDHDVQPEPEPGVAACRCCPGGISRSTRTRRYPSDMSE
                     AEWAVCEPLLPAPAWLTGRGGRPASWCMRDIVDAIRYLTHNGPVWRALPADFPPAGTV
                     YWWADKWQAGGSTERMHDDLRERVRTAAARKVAPTAAIIDSQSVKGSEMIARPCRGYD
                     AGKKVNGTKRHLAVDALGLLLTVLVTAASVQDRDAARLVSCVACSTHAWSTGDRHVGR
                     QVMESALDATGLDLTSSGSLQMGAANRYNQSG"
BASE COUNT          201 a          374 c          350 g          207 t
ORIGIN      
        1 gagaaactca tccattaaca cctatctcct gatcttgcgg ccctacctac cacagactac
       61 gctgctatcc agattggtta tacctgttag ctgctcccat ctgtagagaa cccgatgatg
      121 tcagatctag gccagttgcg tctagcgccg actccataac ctgtcttccg acgtgacgat
      181 cacccgtaga ccatgcatga gtagagcacg ccacgcagct gactaacctg gcggcgtcgc
      241 ggtcttggac cgaggcggcg gtgaccagca ccgtcagcag caggcccagg gcgtcgacgg
      301 ccaggtggcg cttggtccca ttaaccttct tcccagcgtc gtagccacgg cagggccggg
      361 cgatcatctc cgagcccttt accgactgag aatcgatgat cgccgccgtc ggggccacct
      421 tccgcgcggc cgcggtgcgg acgcgctcac gcaggtcatc atgcatccgc tcggtggatc
      481 cgccggcctg ccacttatcc gcccaccagt acacggtgcc cgcgggcggg aagtcagccg
      541 gcagcgcccg ccacaccggc ccgttatggg tcaggtaccg gatggcatcg acgatgtcgc
      601 gcatgcacca gctggcgggc cggccgcccc gcccggtcag ccacgccggg gccggcagta
      661 acggctcaca caccgcccat tccgcctcgc tcatgtccga ggggtaacgg cgggtgcggg
      721 tgctgcggga gatcccgccg gggcagcacc ggcacgccgc cacgcccggc tcgggttctg
      781 gctggacatc atgatcaggg gcagggtaga acggcacgca gggctcctgg catcgcgctg
      841 gcttcgacac ctaagcgatt accaggggcc tcttacgtca cgtcagcgac acaccgcgct
      901 acgcccaaga agatccagat tcgtcctaac cggcagcagc ccggttctca agcaggctct
      961 aacgcggatt tccgtgtagc tggttcgggg caacgtgggt accggctggc tctggagcca
     1021 ggctgggctg acctgggcgg atagagcgac tggtcggata gtccctggga gatattgctg
     1081 tgatcttgct gacggatagc atcactgtga tttgttatcg tgtcgtgatg ct
//
LOCUS       DASRPQ010002375         1090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3751511, whole genome shotgun sequence.
ACCESSION   DASRPQ010002375 DASRPQ010000000
VERSION     DASRPQ010002375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3751511"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..394)
                     /locus_tag="VFD73_26785"
     CDS             complement(<1..394)
                     /locus_tag="VFD73_26785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015934064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZI77583.1"
                     /translation="MTCTDLPLSTPTVARSQDSTVFVALELSRKSWLVGVSAPGDNKI
                     SKYTVAAGDGPGLLALLAKLQEKAAQRLGRPVAVVTIQEAGLDGFWLHRLLLSAGYDS
                     QVVDPASIAVDRRQRRRKTDAIDVETLLR"
BASE COUNT          220 a          351 c          364 g          155 t
ORIGIN      
        1 tgcgcaacag cgtctcgaca tcgatcgcat cggtcttgcg ccgccgctgg cgccggtcaa
       61 ccgcgatcga cgccgggtcc acgacctggc tgtcgtagcc ggcactcagc agcagccgat
      121 gcagccagaa accatccagg ccggcttcct ggatggtcac caccgcgacc ggtcggccga
      181 gccgttgcgc ggccttctcc tgcagcttgg ccagcagcgc cagcagtccg gggccgtcac
      241 cggccgccac cgtgtacttg gagatcttgt tgtcacccgg cgcgctgacc cccaccagcc
      301 agcttttgcg gctgagttcc agcgccacaa agacggtgct atcctgcgac cgggcgacgg
      361 tcggggttga aaggggaaga tcggtgcagg tcatcgctca cctcctggat gctagtcgca
      421 accgcattct accgagccgg ccgccgctca ccaccgtcat aggatctgct acccggacat
      481 gcgaaggagt aatccgccgt atgaagctcc ggggacaacg gccacaatcc gggagcaccg
      541 atccggaggc ggcccagcag aggatggaag gctgaacgcg agtgaacgtc cgttgtcaag
      601 gtccgtgatc taaaaccggc caaaggtgct gacaggccgg ggccaaaagg gcatgcgggt
      661 cggatcgtgg attggaaccc tcggcgacgg tggcaccagg acccgccgga ctataggacg
      721 cagccgcccc atccgcttct ccacattgga caacagggta agccccactc gccccgtcgc
      781 cgcgaggcga cggtattccg accgcaagga aggagatggc ggagggggta gaggatgccg
      841 gagaaagcga aggctccgct gtaatggcgg agacagggcc gcgacagcgg gaatacccag
      901 tccgaaaggg cgcagacttc cggcgggtct cagcggagcg atgagacggg acgcctcaac
      961 cgacggagac gttagacagc gcaagctgaa cagaccgaag gccgggtgtc gaaagccgcc
     1021 cgtagggcga aaccaggatc ggatgctccg tgcggccggg gatttcttcc ccgccgcgga
     1081 ggcttgagcc
//
LOCUS       DASRPQ010002376         1080 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1875076, whole genome shotgun sequence.
ACCESSION   DASRPQ010002376 DASRPQ010000000
VERSION     DASRPQ010002376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1875076"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..850
                     /locus_tag="VFD73_26790"
     CDS             <1..850
                     /locus_tag="VFD73_26790"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HZI77584.1"
                     /translation="TGKELVARTVHRYSDRASRRFVTVNCSALAEGLLESELFGHVRG
                     AFTGAANSRPGLFREADKGTLFLDEIGDISPGLQARLLRVLQEQEIVPVGSETPIKVD
                     VRVIAATHRDLPEAVRAGRFREDLYYRLDVVTLRLPPLRERRQDIPLLVDHFLRALSL
                     RHGRGPVAMDSEAQRRLLAYDWPGNIRELQNVLERAVLLAEQGVIGPEHLATNLLPAA
                     ASSPEPETLPSAALRPLEDIEREHVIRVLAATGGNREESSRILGISRRTLTRMIQRWG
                     LPPRRH"
     gene            complement(863..1009)
                     /locus_tag="VFD73_26795"
     CDS             complement(863..1009)
                     /locus_tag="VFD73_26795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77585.1"
                     /translation="MIWIGTTSVGDLKGNRYASEQAELERYSVTGGERPRPEGQLRRV
                     SLSK"
BASE COUNT          183 a          350 c          335 g          212 t
ORIGIN      
        1 aaccggcaag gagctggtag cacgcacggt tcatcgctac tccgaccgcg ccagccgacg
       61 attcgtcacg gtcaactgct ccgccctggc cgagggtctc ctggaaagcg aactgttcgg
      121 gcacgtaagg ggagccttta ccggtgcggc aaattcgcgt ccggggctct tccgtgaggc
      181 tgacaagggc accctgttcc tcgacgagat cggggatatc tcgccgggcc tgcaggcccg
      241 tctgctgcga gtgctccagg aacaagaaat cgttcccgtt ggcagcgaga cgccgatcaa
      301 ggtggacgtg cgggtgattg ccgcgacgca ccgcgatctt cccgaggcgg ttcgggccgg
      361 acgattccgg gaagacctct actatcggct ggacgttgtg acgctcaggc tgccgccgct
      421 gcgggaacgc cgtcaggata ttccgctcct ggtcgaccat tttcttcgag cgttgagcct
      481 gcgccatgga cgcggtcctg tggcaatgga ttccgaggct cagcgccgtt tgctcgcata
      541 tgattggccg gggaacattc gcgagctgca gaatgtgctg gagcgggcag tactactggc
      601 cgaacaaggt gtgatcggtc ctgagcacct cgcgacgaac ctgctccctg ccgcagcctc
      661 cagccccgag ccggagacgt taccgtcggc ggcattgcgc ccgttggaag acatcgagcg
      721 ggaacacgtc atccgcgttc ttgcggcaac gggcggcaat cgagaggaga gctcccggat
      781 cctgggtatt tcccgccgca ccctcacgcg catgattcag cgctggggtc tcccgccccg
      841 gcgtcactag ggccattctg tctcacttcg acaaactgac ccgccgaagc tggccttccg
      901 gtctcggtcg ctcacccccg gtcacgctgt agcgctctaa ctccgcctgc tcgctggcat
      961 accgattgcc cttcaggtcg ccgaccgaag tggtccctat ccagatcaca acaccctgtc
     1021 actgtcagga ggacctgatg aagcgaatct tttctctcgt tgccgcgggt gtgttggcgg
//
LOCUS       DASRPQ010002377         1305 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4675962, whole genome shotgun sequence.
ACCESSION   DASRPQ010002377 DASRPQ010000000
VERSION     DASRPQ010002377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4675962"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..721
                     /locus_tag="VFD73_26800"
     CDS             <1..721
                     /locus_tag="VFD73_26800"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZI77586.1"
                     /translation="AGISCIEHMTGVPEAASPGRSALVAAHYRGFFPGWTASERSWAD
                     LDSSALSQVAQRLVEEKVSVVPTLVLHETLSRLNDPELLRDPALADVPDRARRAWDIP
                     DMINRAGWSDADFTAFRRSRPVEDLFVRLFAAAGGRIAAGTDAPNQLLIPGYSEHREL
                     ELLVAAGLSPREALRAATRNAAVLLGVDSLGLIAPGKAADLVILQKDPLADIRNTRSI
                     QAVMSRGRLYRPDSLRASASW"
     gene            702..>1305
                     /locus_tag="VFD73_26805"
     CDS             702..>1305
                     /locus_tag="VFD73_26805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77587.1"
                     /translation="MPLPRGDPLTPPSPARQGLERLSLYFAAAATRQGVLARRVLGQP
                     AQDEEALIGRLINDMEHDFVADRPGVGAVVPMIWRAHELLDLGQSPDHPECGRIMARM
                     LTLQAQPGAFSQGCSRSRHSHRVCEHFISGFFSPAPPEQRLAPVMLPNGKMFRAEPAA
                     RFAVSCLALRAALRGRLDNRASVERHLVSLMQLSEQWNDWS"
BASE COUNT          205 a          414 c          428 g          258 t
ORIGIN      
        1 cgccggaatc tcttgcatcg agcacatgac cggggtgccg gaagcagctt cgccggggcg
       61 ttctgcgctg gtggcggccc actaccgagg gtttttcccc ggatggactg catcagaacg
      121 cagctgggca gatctggact cgtccgctct cagccaggtt gcccagcggt tggtggagga
      181 gaaggtctcg gtcgtcccta ccctcgtgct gcacgagacg ctcagtcgcc ttaacgatcc
      241 ggaactcctg cgcgatccgg cactggcgga cgttccggat cgcgcccggc gcgcctggga
      301 catccccgac atgatcaatc gcgccggctg gagcgatgcc gacttcaccg cttttcgacg
      361 ctctcgtcct gtagaggact tgttcgtacg actcttcgcg gctgcaggcg ggcgaatagc
      421 cgccggcacc gatgctccca accagttact cattcccggc tacagcgagc atcgtgagct
      481 ggagctcctg gtggcggctg gcctcagtcc ccgcgaggcg ttgcgtgcgg ccacgagaaa
      541 cgcagctgtt cttctcggag tggactccct ggggttgatt gctccgggga aagcggctga
      601 cctggtgata ctgcagaaag accctctcgc tgacattcga aacacccgct cgatccaggc
      661 agtgatgagc cggggccggc tgtatcgccc tgactcgctg cgtgcctctg cctcgtggtg
      721 atcctctgac gccgccatct cctgcccgtc aggggctcga gcggctgtcg ctctactttg
      781 cggcggccgc aactcgccag ggtgtgctgg cccgccgggt actgggacag ccggctcagg
      841 atgaggaggc tctgatcggc cgcctgatca atgatatgga gcatgatttc gttgctgaca
      901 gacctggggt cggcgcagtc gtacccatga tctggcgggc gcatgagctg ctggacctcg
      961 gccagagtcc ggaccacccg gagtgtggcc ggatcatggc caggatgctg acactccagg
     1021 cgcagcccgg tgcgttcagc cagggatgta gtcgcagtcg tcacagccat cgggtatgtg
     1081 agcatttcat ctccggcttc ttctctcccg cgcctccgga gcagcgcctg gcgccggtga
     1141 tgcttccgaa cggaaagatg tttcgagccg agcccgcggc gcgatttgcc gtcagctgcc
     1201 tggcacttcg ggcggcattg cgcggaaggc tggacaaccg tgcgtcggtt gagcggcatc
     1261 tcgtcagcct gatgcagctg tccgaacagt ggaacgactg gagtg
//
LOCUS       DASRPQ010002378         1204 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_290052, whole genome shotgun sequence.
ACCESSION   DASRPQ010002378 DASRPQ010000000
VERSION     DASRPQ010002378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1204
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290052"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..461
                     /locus_tag="VFD73_26810"
     CDS             <1..461
                     /locus_tag="VFD73_26810"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZI77588.1"
                     /translation="GTTSLFAAFNIADGKVISSLHRRHRAAEFRKFLARIDKAVPAGL
                     DVHLVCGNLATHKTAAIQDWLARHPRFHLHFTPTGSSWINQVERWFGYLTDQMNRRGV
                     HKSVQALESDIRAWIENWNQHPRPFTWTKTAEEILDSLARYIARISGAEH"
     gene            complement(498..899)
                     /locus_tag="VFD73_26815"
     CDS             complement(498..899)
                     /locus_tag="VFD73_26815"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZI77589.1"
                     /translation="MRTPLPPVAAVIGFIDAINRGDVDRLAALMSSDHRLQVHGEPPV
                     TGQEANRDAWNGYVTAFPDYVIYPDHIVHQGDDVLVLGSTTGSHLGLPDQVERQLGVI
                     WRATVRDGLLVLWQIIEDTPGQRAFLGLTHN"
BASE COUNT          225 a          398 c          366 g          215 t
ORIGIN      
        1 acggcaccac cagcctgttc gccgcgttca atatcgccga cggcaaggtg atctcctccc
       61 tgcaccgccg ccaccgcgcc gccgagttcc gcaagttcct ggcccggatc gacaaggccg
      121 tgcccgctgg cctggatgtc cacctggtct gcggcaacct cgccacccac aagaccgccg
      181 cgatccagga ctggctggcc cgccaccccc gcttccacct gcacttcacc ccgaccggct
      241 catcgtggat caaccaggtg gaacgctggt tcggctacct gaccgaccag atgaaccgcc
      301 gcggcgtgca caaaagcgtg caggccctgg aatccgacat ccgcgcctgg atcgagaact
      361 ggaatcagca cccgcggccg ttcacctgga ccaagaccgc agaagagatc ctggactcac
      421 tggcaagata tatcgcacga atctcaggcg cagaacacta gcgccgtgtc aggaaacgtt
      481 tgcgtggcct gttagtgcta gttgtgagtc agcccgagga acgctcgctg tccgggcgta
      541 tcctcgatga tctgccacaa caccagcagc ccgtcgcgca ccgtcgcgcg ccagatcact
      601 ccgagctggc gttctacctg atcaggaagg ccgaggtgag aaccggtcgt actgcccagg
      661 acgagcacgt catcaccctg gtgcacgatg tgatcggggt agatgacata gtccgggaac
      721 gcagtcacat acccgttcca tgcatcgcga tttgcttcct ggccggtcac cgggggctcc
      781 ccgtgaacct ggagccgatg gtctgacgac atgagtgcgg caagccggtc aacatcaccc
      841 ctgttgatcg catcgatgaa cccaatgacg gccgcgactg gcggaagcgg agttcgcacc
      901 cgctgatcct cacagatgac gggtccagga gggcgaacgt tgcctgacgg ggcacatcct
      961 ccctgccgaa tatttgtggc tgacactcgg gctgcggagc gtagcacccg tgcgcagaag
     1021 ttccagatct gtatcgccgc gtaccgagga cggtggtgct ggtcccccgt gtgtgctcgg
     1081 gcatcccggg gtgtcgcgtc tactccgggg gccgccggaa ttcggattga attaacttgc
     1141 gcgccgtgtg gctaggcggg gttcgtaatt tgctcgtaga ggcggtcggc ggcggcgtgc
     1201 atct
//
LOCUS       DASRPQ010002379         1105 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3098572, whole genome shotgun sequence.
ACCESSION   DASRPQ010002379 DASRPQ010000000
VERSION     DASRPQ010002379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3098572"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            314..709
                     /locus_tag="VFD73_26820"
     CDS             314..709
                     /locus_tag="VFD73_26820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77590.1"
                     /translation="MFKRLLIPAIAALGLVFGTAAVASASTGPGSPHASTPGHFSYVD
                     PLFGQVSCNEVHHPNNNLPANFPAGATTQGGYDTVTCILAAPSVFAGQTFTGDWFSDF
                     GTQLDVGVIQFRVSGGGLTYHGIAWYPNG"
BASE COUNT          219 a          365 c          331 g          190 t
ORIGIN      
        1 cttccgtaac agtaactggc caggcttgag accgtcgcat ctgttctgac cgattttaac
       61 tgcacgaatc tgtcgcgaca gagcagacga ttgctatctc ggcagtgttt aaaggtaggt
      121 gacgctgcgt gtttgcacca agagcatgca actagtgccg tagcagttac gtttgtccat
      181 ccggggcttc cgctgggtgc tgctccggcg gacggcgacc gccagggacc ttcggggccc
      241 tagtctcccg gatcggctgg ctctaccctg ggagcaggag caagacagac gccaaggatc
      301 catagggggg attatgttca agcgtcttct catcccagcc atcgccgcgc tcggcttggt
      361 cttcgggacc gccgccgtgg ccagtgcatc cactgggccc ggcagcccgc atgcttccac
      421 gccaggccac ttcagctacg ttgacccgtt gttcgggcaa gtgagctgca acgaggtcca
      481 tcaccccaac aacaacctgc ccgcgaactt cccggctggc gccaccacac agggcggata
      541 cgacaccgtg acctgcatcc tcgccgcgcc cagcgtgttt gccgggcaga ccttcaccgg
      601 tgactggttc agcgacttcg gcacccagct cgacgtcggc gtgatccagt ttcgcgtgag
      661 cggcggcggg ctcacctacc acggcatcgc gtggtacccg aacggctgag ctgaacgtgc
      721 ctgcatgagc aaacttccag gcatacatcg gccgacccaa gatcatccgt caacaccgga
      781 atgaacggac gaggacgtaa caacgaggct gggctgtcca cgagatagct cagcctcgtt
      841 gcgaagctcg ctgtggggcc agacggagag tccgcccagc gagatccggc cgggctcgtg
      901 cgcggcaccg tcggcgaaag cgaccctgtt cgccggtcac agggcgaacg taagcagcta
      961 cggcactagc cccatgccgc ttcaacgttc gaggacgtac ccatgatgag ggagacaggc
     1021 tcccaacgca cgcttacgca tctgagacgc gcagctcacg ccgcgcccac gccgcacgac
     1081 caacgaaccg ggagagcact gatgg
//
LOCUS       DASRPQ010002380         1070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1557155, whole genome shotgun sequence.
ACCESSION   DASRPQ010002380 DASRPQ010000000
VERSION     DASRPQ010002380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1557155"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            283..735
                     /gene="mraZ"
                     /locus_tag="VFD73_26825"
     CDS             283..735
                     /gene="mraZ"
                     /locus_tag="VFD73_26825"
                     /inference="COORDINATES: protein motif:HMM:TIGR00242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0051302 - regulation of cell division
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HZI77591.1"
                     /translation="MFRGATKITLDDKGRMVMPTRYREQISELAQGKLVVTVDRDQCL
                     LIYPLPEWEQIERKLMSLPSLNATARRLQRLMVGHATDLPLDGHGRVLLPAELREFAK
                     LGRHGMLIGQGNRFELWDEARWNERRDAWLASGETPTDLPSELESLSL"
     gene            811..>1070
                     /gene="mraW"
                     /locus_tag="VFD73_26830"
     CDS             811..>1070
                     /gene="mraW"
                     /locus_tag="VFD73_26830"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015271715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytosine(1402)-N(4))-methyltransferase"
                     /protein_id="HZI77592.1"
                     /translation="MVEHIPVLATEALAGLALEAGGYYVDATFGRGGHTALILQALGP
                     EGRVLALDRDPQAVAAGQRHFAHEVRLALAHASFADLAALVPA"
BASE COUNT          190 a          342 c          350 g          188 t
ORIGIN      
        1 attggggccc gagggcggag atgacctccc gggacccacc cccggtgagg tcagccaggc
       61 cgcccgtttc tgaggcgctg tataagcttc tcggggcaag ctgctgattg ctaacaacga
      121 atcgcggaga cccacacgca cccactgttc atttccacat aagtcgttgt gactgcgacg
      181 aatttctcac tatttcaatt gacatagttc gcccccgatt cctatagtgg cggccagtgg
      241 gagaaagtgg ggggaaatgg gcgtaatgcc gccccgccgg tcatgtttcg cggtgcaaca
      301 aaaattactc tggacgataa gggccggatg gtcatgccca cccgctatcg ggagcagatc
      361 agcgaactcg cccagggcaa attggtcgtc accgtcgacc gggaccagtg ccttctcatt
      421 tatcccctgc ccgagtggga gcagatcgaa cgcaagctga tgagcctccc gagcctcaat
      481 gcaaccgcgc gccggttgca gcggctcatg gtgggccacg ccaccgatct acccctcgac
      541 gggcacggca gggtgctgct cccggcagaa ctgcgggagt tcgccaagct tgggcgccac
      601 ggaatgctca tcggacaggg gaatcgcttc gagctgtggg atgaggcgcg ctggaacgag
      661 cgccgcgacg cctggctcgc cagcggcgaa accccgaccg atctgccttc cgagctcgag
      721 tcgctgtcgc tgtagaggtc ttaacgaaaa gcgtggggcc ggggcccgtg gcaagagcac
      781 tcaaggaggc gggggcgcgc cgcttcgcag gtggttgagc acattccagt gctcgccacc
      841 gaggcgctcg cggggctcgc cctggaagcg ggcggttact atgtcgatgc gacattcggg
      901 cgcggcggcc acacggcact cattctccag gcgctgggtc ccgaggggcg cgtgcttgcg
      961 ctcgaccggg atccgcaggc cgtcgcggcc ggccaacgcc actttgccca cgaagtgcgg
     1021 cttgcgctcg cccatgcgtc gtttgccgat ctcgccgcgc tcgtgccggc
//
LOCUS       DASRPQ010002381         1131 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_908583, whole genome shotgun sequence.
ACCESSION   DASRPQ010002381 DASRPQ010000000
VERSION     DASRPQ010002381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_908583"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..653
                     /locus_tag="VFD73_26835"
     CDS             <1..653
                     /locus_tag="VFD73_26835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77593.1"
                     /translation="FHVPFVANFSSLGVEDDDGIEGEISKLLTSSQGISLAVQPYYET
                     APSSQILRATVYGSLGWKMNQGNSLADTSVTLKLHQGRVSAGIAVDIPLVNASTPLSL
                     SFEPVYRFFSRERYKELFGEDRRSFLSLELTGVLPAGHVGLLAQGVLTDGAPSAWRIG
                     FILAGGASSGGSGGGPLDRGGEQRAPAPPPPVGSGTGADSTATPTPAPADSTSKQK"
     gene            817..>1131
                     /locus_tag="VFD73_26840"
     CDS             817..>1131
                     /locus_tag="VFD73_26840"
                     /inference="COORDINATES: protein motif:HMM:NF023802.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="papain-like cysteine protease family protein"
                     /protein_id="HZI77594.1"
                     /translation="MAQERTNWCWAASGQMVMSYLGVRVSQCQQAIRQFSRPGEAPLQ
                     CCDPDQCNWTGYPEYSKFGLNEKLETTPPLTWDRLRYQLSVLKNPVAFTWKWKWQSFE
                     HMM"
BASE COUNT          234 a          326 c          359 g          212 t
ORIGIN      
        1 atttccatgt gccgttcgtc gcaaactttt cctccctggg ggttgaggat gatgacggca
       61 ttgagggtga gatcagcaag cttcttacct cgtcgcaggg catttcgctc gccgtgcagc
      121 cttactatga gacggcgccc agctcacaga tccttcgggc gactgtttac ggctcgcttg
      181 gatggaaaat gaaccagggc aacagcctgg cggataccag cgttacacta aagcttcacc
      241 aagggagggt gtcggccgga atagctgtgg acattccgct cgtcaacgcg tcgactccac
      301 tgagccttag ctttgagccg gtgtacagat tctttagccg agagcggtac aaggagctct
      361 tcggcgagga tcgcaggagc ttcctgagcc tcgaactcac cggagtcttg cccgctgggc
      421 acgtcgggct tctagctcaa ggggtcctta cagacggggc accgagcgcg tggagaatcg
      481 gcttcatcct cgccggcggc gccagcagtg gcggtagtgg cggcgggccg cttgatcggg
      541 gaggcgagca acgggcacca gcgccacccc caccggttgg gagcgggaca ggagcagatt
      601 caacggcgac gccaaccccg gctccggcag actctacctc gaaacagaag taagcgggcg
      661 agcctaagga tggcatctcc aaaggcccgc actgtcgctg gagccctcct gatgctcctc
      721 gcaatggccg cgtgaaggca gaagaaggct ggattcaggg ccgcagagga atccgcgacg
      781 gagctgaagc ccgccatact cctcggcgtg acgcctgtgg cgcaagagcg caccaattgg
      841 tgctgggctg cgtccggcca gatggtgatg agttatctgg gcgtgcgtgt gtcgcaatgt
      901 cagcaggcga ttaggcagtt ctcccggcct ggcgaggcac ctctgcaatg ctgcgacccc
      961 gaccagtgca attggaccgg ataccccgag tacagcaagt tcgggctgaa cgagaaattg
     1021 gagaccactc caccgcttac ctgggatagg ctcaggtacc aactcagtgt cctcaagaat
     1081 ccggtcgcat ttacgtggaa atggaagtgg cagtcgttcg aacacatgat g
//
LOCUS       DASRPQ010002382         1199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_908623, whole genome shotgun sequence.
ACCESSION   DASRPQ010002382 DASRPQ010000000
VERSION     DASRPQ010002382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_908623"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..733)
                     /locus_tag="VFD73_26845"
     CDS             complement(<1..733)
                     /locus_tag="VFD73_26845"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: protein motif:HMM:TIGR00745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HZI77595.1"
                     /translation="MRIAVFGAGAVGGYFGARLAQAGEDVVFIARGEHLAAIRRSGLR
                     VSSIQGDTTIFPARAVARPGEAGPVDAVLLGVKAWQVPDAARAMGPLLDLGTFVVPLQ
                     NGVEAPGQLSAILGRERVLGGLCRIIVSITEPGHIEHSGAEPYLAFGELDGTRSERVQ
                     SLRDAFAGAPGVTVEIPADIVAEMWIKFLFISALSGVGAITRAPIGTLRSKPETRALL
                     IQALEEARAVAEGHQVRLPANVVDQV"
     gene            800..>1199
                     /locus_tag="VFD73_26850"
     CDS             800..>1199
                     /locus_tag="VFD73_26850"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZI77596.1"
                     /translation="MTLLTIEPVTLRGSVVALEPMRMDHVDALTRVGLDPELWRWIPS
                     SVSSAEEMRGYVATALDEQRRGVSLPFVIIARDTEQVVGSTRYGNIDLANRRLEIGWT
                     WVTAAHQRTAVNTEAKLLLLTHAFERLRVNR"
BASE COUNT          204 a          422 c          365 g          208 t
ORIGIN      
        1 tcacctgatc caccacattc gcgggcagcc ggacctggtg tccctcggca acggcgcggg
       61 cttcctccag tgcctggatg agcagggctc gagtctccgg cttgctgcgg agggtcccga
      121 tcggtgcgcg agtgatcgcg cctacaccgc tcaatgccga gatgaagaga aacttgatcc
      181 acatctcggc cacgatgtcg gcagggatct ccaccgtcac cccgggagct ccagcgaagg
      241 cgtctcgcag gctttggacg cgttcgcttc gggtgccgtc cagctccccg aaggcgagat
      301 acggctcagc tccgctgtgc tcgatgtgac ccggttcggt gatgctgacg atgatccggc
      361 acaaaccccc cagcacccgc tcccggccaa gtatggccga cagctgcccc ggggcctcca
      421 ctccattctg cagcggaact acgaaagtgc ccaggtcgag tagcgggccc atcgccctgg
      481 cggcgtccgg cacctgccac gctttcaccc cgagcaacac cgcatccacg gggccagcct
      541 cgcccgggcg cgccaccgcc ctggcaggaa aaatcgttgt gtctccctga atgctggaga
      601 ctcgcagccc gctcctgcgg atcgccgcca ggtgctcgcc tcgggcgata aagacgacgt
      661 cctctcccgc ctgggccagc cgtgcgccaa aatagccgcc caccgctccg gcaccgaaca
      721 ccgctatgcg catcgggcag ttctcaacta atgttcgctg tcgtttcctc gaccaaacag
      781 gctatagagg ctgcggctca tgacgctcct gacgatcgag ccggtgactc tgcgcggctc
      841 ggtcgtcgcg ctggagccca tgcgcatgga tcacgtcgac gccttgaccc gggtgggact
      901 ggatccggag ctctggcgct ggatcccttc ctccgtcagc tcggccgagg agatgcgcgg
      961 ctatgtcgct acggcactgg acgagcagcg ccggggcgtg tcgctgccct tcgtgatcat
     1021 cgcgcgtgac accgagcagg tcgtcggcag cactcgctac ggcaacatcg atctagccaa
     1081 tcgtcgcctg gagataggat ggacctgggt aacagcggcc catcagcgaa ccgcggtgaa
     1141 taccgaggcc aagctcctgc ttcttaccca tgcctttgag cggctccggg tcaaccggg
//
LOCUS       DASRPQ010002383         1413 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1876344, whole genome shotgun sequence.
ACCESSION   DASRPQ010002383 DASRPQ010000000
VERSION     DASRPQ010002383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1413
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1876344"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..297)
                     /locus_tag="VFD73_26855"
     CDS             complement(<1..297)
                     /locus_tag="VFD73_26855"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HZI77597.1"
                     /translation="MIIANDEYEQEALRNLLAPGADAEALGRVLSDAQIGDFAVQVVR
                     NEPSHLIQAQIEEFFSEGRSDDVLLLHFSGHGLKSESSELFFAAPNTRPNRLGST"
     gene            complement(315..683)
                     /locus_tag="VFD73_26860"
     CDS             complement(315..683)
                     /locus_tag="VFD73_26860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77598.1"
                     /translation="MSEEGADAERLAVLTGYLRAELLQLDVEDVGALPAGEPPPGARV
                     FGVATVGALLIALGQSAEGLRSVVSVIRDWLQRGQGTGRAVRLELGGDALELSQASAA
                     DQERLIELFIRRHATEGTAS"
     gene            1113..>1413
                     /locus_tag="VFD73_26865"
     CDS             1113..>1413
                     /locus_tag="VFD73_26865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77599.1"
                     /translation="MALVLLPGCTGHSSGTQDAAYKRAFVQNFVGYCADVDRNLNTVD
                     LSSHPGQAADQLSRFASQARSHTPPHAQRQQLDSLLTAIDDAVRQFRSAQAALSSG"
BASE COUNT          288 a          473 c          399 g          253 t
ORIGIN      
        1 ggtggacccg agccggttcg ggcgggtatt gggggcggcg aaaaacagct cgctagactc
       61 gctcttcagc ccgtgaccgg aaaaatgcag caacagcaca tcgtcggacc ggccttccga
      121 aaagaactcc tcgatctgcg cctggatgag atgcgagggc tcatttcgca ctacctgcac
      181 ggcaaagtcg ccgatctggg catcgctgag cacccgcccg agcgcctcgg cgtccgcccc
      241 cggggccagc aggttgcgca gcgcctcctg ctcgtactcg tcgttggcga tgatcaaggc
      301 tctgcgctgg ccgctcacga tgcggtcccc tccgtggcgt gcctgcggat gaacaactcg
      361 atcagccgtt cctgatcggc cgcgctcgct tgcgagagct ccaacgcgtc gccgccaagt
      421 tccagccgca ccgcgcggcc tgtcccctgg ccacgctgca gccagtccct gatcaccgat
      481 accaccgacc gcaggccctc agccgattgg cccagagcga tcaacaacgc accaacagtg
      541 gccacgccga acacccgggc acccggcgga ggctcaccag ccggaagcgc acccacatcc
      601 tcgacatcaa gctgcagaag ttccgcccgc aagtagccag tcagcacagc gagccgctcg
      661 gcgtccgcac cttcctcgga caaatgaaga cgcagttctc cgtccataag ccccccagcg
      721 atctctacag gcagaatgca cccgcggctg tatcaatgca atagatttct cgccgcagcc
      781 tcaccagccc gacccacctt cgcccataat acgtaccgcc aggtgttgtc gcaggatcgg
      841 cggatcgctg caggagcatc cccggagcgg gtggcgatct taatcgagtc tgctaactcc
      901 tgcctgacta agacaccctg atcaatctgt tcacggtagc cactcgaatg ttggacgcga
      961 cgaggccgga cggaatgtac acaatatgct agttgacggg cattatttcc agccttagaa
     1021 tgcgaagtta gccaacgcgg gctgcgctaa agatggcgta ccgaacttcg gttcggaagg
     1081 ggggcgcaat gcggcggcta tggattgtat gcgtggcact ggttcttctg ccaggatgta
     1141 ccggccactc ctcaggaact caggacgcgg cctacaagcg ggcgttcgta cagaacttcg
     1201 tcggttattg cgccgatgta gatcgcaacc tgaacacggt tgatctaagc tcccacccgg
     1261 gtcaagccgc tgaccaactg agcagatttg ccagccaggc tcgctcgcat actcctcccc
     1321 atgctcaacg tcagcaattg gatagcttgc taactgcgat cgacgatgcg gtgcggcaat
     1381 ttcgatccgc tcaggcggcg ctgtccagtg gac
//
LOCUS       DASRPQ010002384         1074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2189037, whole genome shotgun sequence.
ACCESSION   DASRPQ010002384 DASRPQ010000000
VERSION     DASRPQ010002384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2189037"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..560)
                     /locus_tag="VFD73_26870"
     CDS             complement(<1..560)
                     /locus_tag="VFD73_26870"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF025002.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HZI77600.1"
                     /translation="MGRSVIVMSLLLGGAVTACSSFRDLFSAHADVAAEAGGQRLTPE
                     RLAQIMNSGKGIRPSLDAASFVANVWIDYSLFAQAVANGKLPLDSASIAQAVWPQVAE
                     LKGNHWHDSLMARRSSISPTAVDSLYRGNQIRVLQHILYRVPPNAVPEVRNAARKKAE
                     GTLVQLKRGADFGQLATKFSEDPGSK"
     gene            complement(601..>1074)
                     /locus_tag="VFD73_26875"
     CDS             complement(601..>1074)
                     /locus_tag="VFD73_26875"
                     /inference="COORDINATES: protein motif:HMM:NF015426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRCF domain-containing protein"
                     /protein_id="HZI77601.1"
                     /translation="QPPEVVLDLPAHLPDTYVPDDDVKLDLYRRLARAAASSEIDGLR
                     DELRERFGPLPPMAETLLDMARLRVMGAALGLQNVLVRGDEARLTFRPGTAPRLAGLT
                     TALDDVQLAAEVRRTVPLSLRLLRLGGEQIVLALVRALRRASESPNSRVESRAHT"
BASE COUNT          202 a          351 c          329 g          192 t
ORIGIN      
        1 atcttgcttc ccggatcctc ggagaatttc gtcgccagct ggccaaagtc cgccccacgc
       61 ttgagctgca cgagcgtccc ttccgccttt ttgcgggcgg cgttgcgaac ctcgggaaca
      121 gcattaggcg ggacccgata gagaatgtgc tgcaggaccc ggatctgatt tccccggtag
      181 aggctgtcta ccgcggtggg cgagatgctc gagcgacgag ccatgaggct atcgtgccaa
      241 tggttcccct taagttccgc cacctggggc cagaccgcct gcgcaatgct ggccgaatcc
      301 agcggcagtt ttccattggc cacagcttga gcaaacagcg aataatcgat ccacacgttc
      361 gcgacgaaac ttgctgcgtc caggctggga cgaatgccct tcccgctatt cattatctgc
      421 gccagccgtt cgggcgtgag tcgctggcca ccggcctcgg cggcaacatc ggcgtgggcc
      481 gaaaagaggt cgcggaagct ggagcaggcg gtaaccgcac cacccagcag aagagacatc
      541 acaatgactg aacgacccat tgatactccc tcaaagaaat cgagacactc gcgtcgtcgt
      601 ctaagtgtga gcccgactct ccacccgaga gtttgggctc tccgatgctc tccgtaacgc
      661 gcgtacgagc gccagaacga tttgctcacc gccgagccgc aggagccgca gggagagcgg
      721 cacggttcgc cgaacctccg ctgccagctg cacgtcatcc agtgccgtgg tgagtcccgc
      781 gagcctgggt gcggtgcctg ggcggaaggt cagccgagcc tcgtcccccc ggaccagtac
      841 attctgcaag ccaagggcgg ctcccatgac ccggagccgt gccatgtcga gtagtgtctc
      901 ggccatgggc ggcagcggtc cgaagcgctc ccgcagttcg tcgcgaagcc cgtcaatttc
      961 gctggatgcg gcagcccgcg ccagtcgccg atagagatcc agcttcacgt cgtcgtcggg
     1021 cacgtatgtg tccggcagat gcgccggcag gtccagcacc acttcaggcg gctg
//
LOCUS       DASRPQ010002385         1199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4044254, whole genome shotgun sequence.
ACCESSION   DASRPQ010002385 DASRPQ010000000
VERSION     DASRPQ010002385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4044254"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1042
                     /locus_tag="VFD73_26880"
     CDS             <1..1042
                     /locus_tag="VFD73_26880"
                     /inference="COORDINATES: protein motif:HMM:NF014798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77602.1"
                     /translation="LAQHIVTTSPDVTVSTNLGPWVNRRGIFDRHTRNDVFRDAKLAS
                     AQRWGMSPKGQHIELGIAEQNLFLLLGAAGLTPAMTGARLLPVGTVYDPFVNRGLDAL
                     IYACYQDARFLLVSTPSGLTLAPEGGQHQSINTPLIGIAADRLASFEPAHVDELAILL
                     RHAFEYMQQPDGSAVWLRLSTRQLEQPERTLDAQAVIAGAHWVVPPAQGARIAIGYQG
                     PVAPEAAEAFAQLVSEEPGAGLLAITSPDRLHADWISALRMRRSGHAAEPHIERILAP
                     LAPGASLVTVLDGHPATHAWLGSVCGHRMVPLGPDRFGQSGDIPDLYREYGMDSDAIL
                     DACAQALLTWSG"
BASE COUNT          213 a          367 c          402 g          217 t
ORIGIN      
        1 cctggctcag cacatcgtca ccacgtcgcc ggacgtgacg gtgtctacca acctcggacc
       61 atgggtaaac cggcgcggca tcttcgatcg gcatacgcgc aacgacgtgt tccgcgacgc
      121 caagctggcc agtgcacagc ggtggggcat gtccccgaag ggccagcata tcgagctggg
      181 aatagctgag cagaacctgt ttctgctgct gggggcggca gggctgacgc cggcgatgac
      241 cggcgctcgg ctgctcccgg tcggcacggt gtatgatcca ttcgtcaacc gcgggctcga
      301 tgcactgatc tacgcctgct accaggacgc gcggttcctt ctggtatcga cgccttcggg
      361 actgacgctg gctcctgaag gcggccaaca ccagtcgatc aacacacccc tgatcggcat
      421 cgcagccgac cgactggcaa gcttcgagcc ggcgcatgtc gatgagttgg ccatcctgct
      481 gcgtcacgcg ttcgaatata tgcagcagcc cgacggctcg gctgtatggc tacgtttgtc
      541 gacgcgtcag ctagagcaac cggaacggac gctggatgcg caggcggtca tcgcgggagc
      601 ccattgggtg gtccccccgg cgcaaggagc gcgcatcgcg atcggatatc aggggccggt
      661 ggcgccggag gcggccgagg cctttgccca attggtgagt gaggagccag gggcagggct
      721 gctggcaatc accagtccgg atcgtctgca cgccgactgg atcagcgctt tgcggatgcg
      781 gcgcagcgga catgccgcag agccacacat cgagcgaatt ctggcgccac tggcgcctgg
      841 cgcgtcactg gtgacggtcc tcgacggaca cccggccacg cacgcctggc tgggctcagt
      901 gtgcggacac cgtatggtgc cgcttgggcc ggaccgattc gggcagagcg gagatatccc
      961 ggatctctat cgggagtacg gcatggacag cgatgccatt ctggacgcat gcgctcaggc
     1021 gcttctgacc tggtcgggct gagcagtctc tcagcacacc tgggagatct tgcgttgcgt
     1081 cgtctccagc ggtgattggc tgaacgctgc actatactat gcgaaatggt gtccgacgaa
     1141 ttggcacagg ggcaattttt ccatcgggcc gatggggcta tcctgctgag agcagaagg
//
LOCUS       DASRPQ010002386         2101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_909072, whole genome shotgun sequence.
ACCESSION   DASRPQ010002386 DASRPQ010000000
VERSION     DASRPQ010002386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_909072"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..689
                     /locus_tag="VFD73_26885"
     CDS             <1..689
                     /locus_tag="VFD73_26885"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HZI77603.1"
                     /translation="PMALIVGTLGILLIYLLLNVAYVYLVPLSEMARSPLIAATAAER
                     IPILGAAAGGVISAVVMVSCFSTLIGSMMTGPRIFFAMADRGLFFQTIARVSPRFQSP
                     SVAIWLATGLGVVYVLLNDFQQLADKFILGIWPFYALAVAAVFVLRRTRPDLERPYRT
                     WGYPLVPLLFLLASVGMVVNALVTDPINTGITFGIILAGVPAYLAWRTWRPPLLEPIG
                     KKELAAEYKR"
     gene            complement(686..1564)
                     /gene="nadC"
                     /locus_tag="VFD73_26890"
     CDS             complement(686..1564)
                     /gene="nadC"
                     /locus_tag="VFD73_26890"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR00078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HZI77604.1"
                     /translation="MRSDKALFDSEVERIAATALAEDGKIDLTTQLTVPPTLTAQGLI
                     EYRSEGLLAGQHFAEAVAAQCDCTIEWRIGEGGVVRSVGGGSMVGTMFGELRQMLRAE
                     RPLLNLLQRASGIASATRRYVDAVHGTGCRILHTRKTAPGLRALDVAGVLAGGGHRYR
                     MDLAHEVMIKDNHWQSLERTGQPLAEALAEARRKGATALYVEVESVEQLELACQAGAT
                     RLLIDNQSPETLAAWAALAQQRSPGIEIEASGGIVLDTARAYAAAGADFISIGALTHS
                     VRAADIALEVRMDSNS"
     gene            complement(1551..>2101)
                     /gene="nadA"
                     /locus_tag="VFD73_26895"
     CDS             complement(1551..>2101)
                     /gene="nadA"
                     /locus_tag="VFD73_26895"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: protein motif:HMM:NF014498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HZI77605.1"
                     /translation="DVIDAIPADKGILFLPDFFLGSHVRRMRPDRRIEVWMGECHVHK
                     GIRPDVLNQARAAYPEAEVLVHPECGCAGQLIYSVGMGDLDPKGLHITSTEGMIRKVT
                     ERPATQFIVATETGIMHRMQQVAPTKQFIPADPEAVCAFMKTITLPGVRDSLLLDRSH
                     VTVAPDIAARARRAIDRMVALG"
BASE COUNT          347 a          684 c          643 g          427 t
ORIGIN      
        1 tgcctatggc cctcatcgtc ggtacactcg gcattctgct gatctatctg ctgctcaatg
       61 tggcctatgt ctatctggtt ccgctctcgg agatggcccg gtcaccactc atcgcggcca
      121 ccgccgcgga gcggatcccg atcctgggag ccgcagccgg cggagtcatc tcggcagtgg
      181 tcatggtgtc ctgcttcagt accctcatcg gctcgatgat gaccggtccg cgaatctttt
      241 tcgccatggc ggatcgaggc ttgttctttc aaaccatcgc ccgggtgtct ccccgtttcc
      301 agagcccgtc ggttgcgatc tggctggcaa caggattggg cgtggtctat gtgctgctga
      361 acgatttcca gcagctcgcc gacaagttca ttcttggcat ctggccgttc tatgcgctgg
      421 ccgtcgcagc ggtcttcgtg ctccgacgga cccggcccga cctcgagcga ccatatcgca
      481 cttggggcta cccgctggtg ccgctgcttt tcctgctcgc ctcggttgga atggtggtca
      541 atgccctggt gaccgatccg atcaacactg gcatcacctt cgggataatt ctggcaggag
      601 ttcccgcgta tctcgcctgg cggacgtggc ggcctccctt gctcgagccg atcgggaaga
      661 aggagcttgc cgcggagtac aagcgctaag agttcgagtc cattctgact tccagcgcga
      721 tatcggcagc tcgcacactg tgcgtcagcg cgccgattga gatgaaatcc gctcccgctg
      781 cggcgtaggc tcgagccgtg tccaatacga tgccgccgct cgcctcgatc tcgatgccgg
      841 gagatcgttg ctgtgccagg gccgcccagg cggcaagggt ctcgggcgac tggttgtcga
      901 tgaggagccg agtcgctcca gcctgacagg cgagctcgag ctgttcgact gactccacct
      961 ccacatagag cgcggtcgca cctttccttc tcgcctccgc cagcgcttcg gccagcggct
     1021 gaccggtgcg ctccagtgat tgccagtggt tgtccttgat catcacctcg tgcgccagat
     1081 ccatccggta gcgatgtcca ccgccggcga ggacaccggc gacatccagt gcccggagcc
     1141 ccggtgcagt cttccgggta tgcaggatcc gacacccggt gccgtgaacg gcatcgacgt
     1201 agcgtcgcgt ggcactggcg atccctgacg ctcgctggag caaattcaga agcggacgct
     1261 ccgcccgcag catctgccgc aactctccga acatggtgcc gaccatggac ccgccgccga
     1321 ccgatcgcac cacgccgcct tctccgatcc gccactcgat cgtacagtcg cactgcgcag
     1381 cgaccgcctc ggcaaaatgc tgcccggcga ggaggccttc gcttcggtac tctatcaatc
     1441 cctgggcagt gagggtgggg ggaacagtca gctgagtggt caggtcgatc ttgccgtcct
     1501 ccgccagtgc ggtcgcggca atgcgctcaa cctcggagtc gaacaaagcc ttatccgagc
     1561 gcaaccatac gatcgatcgc ccggcgggcg cgggcggcga tgtcgggagc caccgtcaca
     1621 tgagagcggt ccagcagcag cgaatcgcgc acgccgggga gggtaatcgt cttcatgaag
     1681 gcgcagacgg cttcggggtc ggccggaatg aactgcttgg taggcgccac ctgctgcatg
     1741 cgatgcatga tcccggtttc agtggccacg atgaattggg tcgccggtcg ctcggtgacc
     1801 tttcggatca tgccctcggt cgaggtgatg tgcagtcctt tgggatcgag gtctcccatg
     1861 cccacactat agatgagctg gccggcgcag ccgcattcgg ggtggaccag cacctcggct
     1921 tcggggtagg ctgcccgggc ctggttcagc acgtcgggtc ggattccttt atgaacgtgg
     1981 cactctccca tccagacctc gatccgccgg tcgggacgca tcctccggac atgacttccc
     2041 aggaagaaat ccggtagaaa cagaatcccc ttgtcggccg gaatcgcatc gatcacgtcg
     2101 a
//
LOCUS       DASRPQ010002387         1748 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_909597, whole genome shotgun sequence.
ACCESSION   DASRPQ010002387 DASRPQ010000000
VERSION     DASRPQ010002387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_909597"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..376)
                     /locus_tag="VFD73_26900"
     CDS             complement(<1..376)
                     /locus_tag="VFD73_26900"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HZI77606.1"
                     /translation="MARITIDELLADARRRLTRLNPAQALQAMHAGAPLIDIRSDTQI
                     ARDGIIAGALVIPRNVLEWRLDPASQHHHPCAPQLDEQIILLCDEGCQSSLAAATLQQ
                     LGFARATDVEGGFQAWRAAGLPV"
     gene            748..1188
                     /locus_tag="VFD73_26905"
     CDS             748..1188
                     /locus_tag="VFD73_26905"
                     /inference="COORDINATES: protein motif:HMM:TIGR01409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HZI77607.1"
                     /translation="MHDHATEMPSAAVTRRRFLGTAGATGVGLGLGSGLLTSAVAMAD
                     SDRSAVAVADQGGSAVLPRPIPSGFVTPVGVFIHHHLPGRGIEASQITDFRGTIGLAQ
                     LTGTGTGTINGTSSKLNFEIDNRFMQGTYVGVDGRRHQGTFGFI"
     gene            1189..1662
                     /locus_tag="VFD73_26910"
     CDS             1189..1662
                     /locus_tag="VFD73_26910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77608.1"
                     /translation="MDLFDPGQLDPAGNPTQIHDFNPGTIDSGPAKGLFWTMHIPTHD
                     VHVNLGRATATMRVKNADVEDYHTLKNALLDGPSDPASVSFVIRWQGVKARVEVRDFE
                     LGFAGRFIEDSATVEWSASVPSTGFSFRSDPATTSATTFAEIGSERNGVFFHGAA"
BASE COUNT          302 a          544 c          586 g          316 t
ORIGIN      
        1 ccaccgggag ccctgcggcg cgccatgcct gaaagccgcc ctcaacgtca gttgcgcggg
       61 caaagcccag ttgctgcagt gtcgccgccg ccaggctgga ctggcaaccc tcatcgcaga
      121 gcaggatgat ctgctcgtcg agttgcggcg cacagggatg gtggtgctga ctcgctggat
      181 ccagccgcca ttccaggacg tttcggggga ttacgagcgc tcccgcgatg atgccatcac
      241 gggcgatttg cgtatcggag cggatgtcga tcaggggcgc cccggcatgc atggcctgca
      301 gcgcctgagc cggattgagc cgggtcaggc ggcgccgtgc atctgccagc agctcatcga
      361 tcgtgatccg tgccacggcg cgcatcctag gtgatccgcg gttatgtcac cagccaggga
      421 tcccgtcagc tggaagcgct gatcgaggcg gtcaggactg gtccggcaat gcccggtgct
      481 ggactatttc atttcgggca tatgtttcgc ccagtaatag ccagaaagaa tgagttactt
      541 cctggttagc ccttgccggc ccttggcaga cgtgttaacg cttgattgcc tgacgccgga
      601 tgccgcaaca tgcggtgccg gaactggccg ccacggtgag cagttcatga acaaaggggg
      661 aagggacacg tcctcgcggt gttgtggtgc gcgggtgctg gaggagggcg ccagggtcgg
      721 gcagggtgat ttccctgagg aggggccatg catgatcacg cgacagagat gccgtcagcg
      781 gcggtcacac gccgccggtt tctgggcacc gcaggtgcga ccggagttgg cctcggcctt
      841 ggttcgggac tgctgacgtc ggctgtggca atggctgaca gcgacaggtc ggctgtggcc
      901 gtggctgacc aaggcgggtc ggcggtgctt cccaggccta ttcccagcgg cttcgtgacg
      961 ccggttgggg tgttcattca ccatcatctg ccggggcgcg ggatcgaggc ctcgcagatc
     1021 accgacttca ggggcacgat cggcctggcg cagctgaccg gtaccgggac gggcacgatc
     1081 aacggcacca gcagcaagct caacttcgag atcgacaacc ggttcatgca gggcacctac
     1141 gtcggggtgg acggcagacg ccaccagggg acgttcggct tcatttgaat ggacctcttc
     1201 gatccgggtc agttggaccc ggcaggaaac ccgacgcaga tccacgactt caaccccggt
     1261 accatcgact ccggcccggc gaagggcctg ttctggacga tgcacatccc gacccacgac
     1321 gtgcacgtta acctcgggcg ggccaccgca acaatgcggg tcaagaacgc cgacgtcgag
     1381 gactaccaca ccctcaagaa cgccctgctt gacggcccgt ccgacccggc ctcggtgtcg
     1441 tttgtgatcc gctggcaggg cgtgaaggcc cgcgtggagg tccgcgactt cgagctgggg
     1501 ttcgctgggc ggttcatcga ggactcggcc acggtcgagt ggtcggcgag cgtgccctcg
     1561 accgggttca gcttccgctc cgaccccgcc acgacctctg cgaccacctt tgccgagatc
     1621 ggttcggaac gaaacggcgt cttcttccac ggagctgcct aggtgcgtca accatcagcc
     1681 ggagccggac agatccactc gcttctggtg attcgccggg cagatgcttc cgaatcatcg
     1741 tcaggtga
//
LOCUS       DASRPQ010002388         1865 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1217666, whole genome shotgun sequence.
ACCESSION   DASRPQ010002388 DASRPQ010000000
VERSION     DASRPQ010002388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1865
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1217666"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..243
                     /locus_tag="VFD73_26915"
     CDS             <1..243
                     /locus_tag="VFD73_26915"
                     /inference="COORDINATES: protein motif:HMM:NF020795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1963 domain-containing protein"
                     /protein_id="HZI77609.1"
                     /translation="LINSQYLLPTGSWHQMFGRGVEIQGNAAAENEGNVMLLQLVYDD
                     LLHWRFGDMGAYQFWIPPDDLLRNNWAAVRVSFEAH"
     gene            complement(240..446)
                     /locus_tag="VFD73_26920"
     CDS             complement(240..446)
                     /locus_tag="VFD73_26920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77610.1"
                     /translation="MKEETLWYRLVTGGEVPKYLRLRPRARISAVVDGADDQVLAQAN
                     AMITRVTVELLVSDPALTIDVGEH"
     gene            complement(550..930)
                     /locus_tag="VFD73_26925"
     CDS             complement(550..930)
                     /locus_tag="VFD73_26925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77611.1"
                     /translation="MKRLLLVISVSVLPSLLAAQSGKGPYLLVGVLRRLEGHDLAFDA
                     GVAHHWQWHREHRDPYVWYAWNIRFSQRTGGLVFASFNHFRRQSGQRRLTSGRPGRLA
                     DQWRAPLRIHEPGGLSLSAGAFSR"
     gene            complement(1433..>1865)
                     /locus_tag="VFD73_26930"
     CDS             complement(1433..>1865)
                     /locus_tag="VFD73_26930"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HZI77612.1"
                     /translation="NHLGLVKFMFPNQFAIYLHDTPTRNLFTGRKRTLSHGCVWVEKP
                     IELADYVLAGQEGWNEMKVRQAMVTTHSATDGASVDGNTVPLARPVPVYLVYLTAFVR
                     DGVVNFRRDPYGKDRQAIARLGKLTPTDPGLCEELQKLLGA"
BASE COUNT          365 a          576 c          587 g          337 t
ORIGIN      
        1 ctgatcaaca gccagtatct acttcccacc ggcagctggc accagatgtt cggccgggga
       61 gtcgagattc agggtaacgc cgcggcagag aacgagggga atgtgatgct gctgcaactg
      121 gtctacgatg acctgctgca ctggcgattc ggcgacatgg gcgcgtacca gttctggatt
      181 ccaccagacg atttactgcg gaacaactgg gccgccgtac gggtgagctt cgaagcgcac
      241 tagtgttccc caacatcgat cgtcagggcc gggtctgaaa ccaacagctc cacagtgacg
      301 cgcgtgatca tcgcattcgc ctgggccaga acttgatcgt ccgcaccatc aaccactgcc
      361 gagatccggg cccgaggacg gagtcgcaga tacttgggca cctcgccgcc ggtcaccagc
      421 ctgtaccaaa gcgtctcctc cttcaacgac ggctgtcccg ccttgagctt ggcctcgaat
      481 gcactggccg cgcccggctg aacctggacg gtcgtaaact cgagtaacgg ggccggtcca
      541 gggtcgccgc tacctcgaga aagctccggc agatagcgat aggcctccag gttcgtgaat
      601 tcggagtggg gcgcgccact gatccgccag tcggcccggt cttcccgagg tgagacggcg
      661 ctgtccagac tgccggcgga aatgattgaa gctggcgaag accagtccgc cggtccgctg
      721 ggaaaagcga atattccagg cataccacac gtaggggtcg cgatgctcgc ggtgccactg
      781 ccagtggtgc gccacccccg catcgaatgc gaggtcgtga ccttccagcc ggcgcagcac
      841 cccgaccagc aggtaggggc ctttgccgct ttgggccgcg aggagcgagg ggaggacgct
      901 gacgctgatg acgagcaaca ggcgcttcat ggggactcct tcgggcaggc cgcgggtcac
      961 tgcggtagcg atcctaccat aggagttccg cgccagtgtt tgccgccaat cttccgaccg
     1021 tttccgccag acggccgctg attggcaaac caggccagcc gagacatagt tattgaggcg
     1081 atcacggcaa agagaaccac agcaggagag accacgagtg accgcgcagg actttcgaag
     1141 gatcgcgctc agctttcctg aagtcaccga atcggctcac atgggacatc cggacttccg
     1201 ggtgaagaac cggatctttg ccaccctggg ctatcccgct cggggctggg gaatggtgaa
     1261 gctcacgccg gaacagcagg actggctggt tcgagctgaa ccaaacgcct tcactcccgt
     1321 ggtcggcgcg tgggggcggg cgggctatac taacgtgaag ctgcgggccg ctcggaaagg
     1381 catggttcga gaagcgctca tgacggcgtg ggggatcggg cgccgaagcg cctcatgctc
     1441 cgagaagctt ctgcagctcc tcgcagaggc ccggatcggt aggggtcagt tttcccagtc
     1501 gcgcaatcgc ttgccggtcc ttcccgtaag gatcccgccg aaagttcacg acaccgtctc
     1561 gaacgaatgc ggtgagatag accaggtaga ccggcaccgg ccgggccagc gggacggtgt
     1621 tgccgtccac gctcgctccg tcggtggctg agtgcgtggt caccattgcc tgtcggacct
     1681 tcatctcgtt ccagccttcc tgtcccgcaa ggacgtagtc agcgagctct atcggcttct
     1741 ccacccacac gcacccgtgg ctcagtgttc gctttcgtcc agtaaacagg ttccgtgtcg
     1801 gcgtgtcatg caaatagatg gcgaactggt tcggaaacat gaacttcacc agcccgagat
     1861 ggttg
//
LOCUS       DASRPQ010002389         1857 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2469882, whole genome shotgun sequence.
ACCESSION   DASRPQ010002389 DASRPQ010000000
VERSION     DASRPQ010002389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1857
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2469882"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..858
                     /locus_tag="VFD73_26935"
     CDS             <1..858
                     /locus_tag="VFD73_26935"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HZI77613.1"
                     /translation="LRLVKKTVNFDNHNVYHFYYGDERGTPGTLWTTFPYAGWGVAPG
                     RHGEGQITTTSFSVPVHSLPWWTSRLLDRGVAIRESGTSAISFQDPSGLIIQLQGTVD
                     DRRTPWSGSGITTDAAIRGLESVILTIAQPGPTVTLLTDLLGFTVTEQNEHSVTLGVN
                     GNEPGKTIRLRHGTGAPPARNGLGTVHHVALAIASGEEQLRLRSELVDLGLTVTPVLD
                     RQYFHSIYFREPGGVLLEVATVGPGFSIDELVSDLGRELKLPPWEEAHRAAIEQALPP
                     ISLQPLLRR"
     gene            855..1562
                     /locus_tag="VFD73_26940"
     CDS             855..1562
                     /locus_tag="VFD73_26940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77614.1"
                     /translation="MRLDVREPGAARAGGYVLALASFLVVIGLIFHPVPAGGFEEKPS
                     ILSQTPWWGPIHVAIAAGFVLSVLGSVLMLAGGGALLRPWTRAFFWGSIAVGMIFFTG
                     VALINGWVMHALTARGAPASDPLLYYAFNRLLIGYGWLGNPLFLVGLTGLAYLESRGP
                     ARVMPPTVAWAGLIVSVLSWGRGIGSATGWYFLEPLIYANVPAFLWLGYYGLRIAAEV
                     QSTEREDAHATIELGAR"
     gene            1534..1707
                     /locus_tag="VFD73_26945"
     CDS             1534..1707
                     /locus_tag="VFD73_26945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77615.1"
                     /translation="MRPLNWALGSYVLVYWLAYLVVIGGVIVALWRGAMAQERIARHL
                     EGIERALTQRPLG"
BASE COUNT          303 a          581 c          593 g          380 t
ORIGIN      
        1 cttcgtctgg tgaagaagac ggtgaacttc gacaaccata acgtctatca cttctactat
       61 ggtgacgagc ggggaactcc gggcactctc tggacaacct ttccctacgc cggctggggc
      121 gttgccccag gccgccacgg agagggacag atcaccacga cttccttttc ggttccagtc
      181 cattcgctgc cctggtggac tagccgcctg ttggatcgcg gagttgccat cagagagagt
      241 ggcaccagtg cgatctcgtt ccaggatccc tcgggactga tcatccagct gcagggcaca
      301 gtggatgatc gtcgtacgcc ctggagcggc agcggcatca ccacggatgc tgcgattcgt
      361 ggactcgaaa gcgtgattct gacgattgcc cagccgggcc cgacggtaac tctgctcacc
      421 gaccttctcg ggttcaccgt gacggagcag aacgagcact ccgtgacgct cggggtgaac
      481 ggcaatgagc ccggcaagac aatccggctg cgtcatggca ccggtgcccc acccgcccgc
      541 aatggcctcg gcaccgtaca ccacgtcgcg ctcgccattg cgagcgggga agagcaactc
      601 cgtcttcgca gcgagctggt tgacctggga ttgactgtta ccccggtgct cgaccggcag
      661 tacttccatt cgatttactt ccgcgagccc ggcggcgtgc tgctggaggt ggccacagtc
      721 ggcccaggct tcagcatcga tgaactggtc agcgatctcg ggcgcgagct caagctcccg
      781 ccctgggagg aagctcatcg ggcggcgatc gagcaagcac tcccacccat ctctctgcag
      841 cccttattgc ggcgatgagg ctggacgtac gcgagcccgg agcagcacgc gccggggggt
      901 acgtcctggc cctcgcgtct tttctggttg tgatcggctt gatattccac cctgtccctg
      961 ccggcggatt cgaggagaag ccgtcgatat tgagccagac tccctggtgg ggtccgattc
     1021 acgtcgccat cgccgcgggt ttcgtgctct ccgtcctggg cagtgtgctc atgctcgccg
     1081 gtgggggcgc cctgctgaga ccgtggaccc gagcattctt ctggggatcg atcgcagtgg
     1141 gaatgatctt cttcaccggc gtggcgttga tcaacggctg ggtgatgcac gcgctcaccg
     1201 ctcgaggtgc accggcgagc gaccccctgc tctactacgc cttcaatcgc ctgctcatcg
     1261 gatacggctg gctgggcaac ccactgtttc tggtcgggct cacgggattg gcttacctgg
     1321 aaagccgcgg accggcgcgc gtgatgccac cgaccgtggc atgggcgggc ttgatcgtga
     1381 gcgtgctttc gtggggccga ggcatcggct cggccacggg atggtacttc ctcgaaccct
     1441 tgatctacgc caacgtgccg gcgtttctct ggctcggata ctatggtctc aggatcgcgg
     1501 ccgaagtcca atcaactgaa cgggaggatg cgcatgcgac cattgaactg ggcgctcggt
     1561 agttatgtac tggtgtactg gctggcctat ctcgtggtga tcgggggtgt gatcgtcgcg
     1621 ctgtggcgcg gtgccatggc ccaggagcgg attgcccgtc acctcgaagg catcgagcgg
     1681 gcgttgaccc aacgtcccct cgggtgagat gagcgcggtc cgcaccttcc cctcggcagc
     1741 ggccttatga ggcactctgc ttcggcgatc gacggagttc gacgttcgct ggacgatgcg
     1801 agcttcgcca gccgcctgat ttctctgaga ttctagcggg ggctcgcgta caccagc
//
LOCUS       DASRPQ010002390         1106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3101049, whole genome shotgun sequence.
ACCESSION   DASRPQ010002390 DASRPQ010000000
VERSION     DASRPQ010002390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3101049"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            110..>1106
                     /locus_tag="VFD73_26950"
     CDS             110..>1106
                     /locus_tag="VFD73_26950"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI77616.1"
                     /translation="MSSPATPSRSPAASAGSFIGTFALILAGIAGLFAIDSVLAEHDR
                     AAGRSEARRLYQEGIRLEQQGATVQAVDRLRSAVSAERQNPLYQRALANGLLAMGKIT
                     DAETVLTERLQHDPADAGASLLMARALVRQRKLPQAIAFYHRAIYGQWEDRQLGDALE
                     ARFELVDLLARENARQELLAELLPLETQAPGDIATRRRIARLFIAAGSPSHAIEIFRD
                     VLHRNPEDGEAYAGIGEAKFQQGNYRSAQANFAAAQKLMPGNREVEARLELCREVLAL
                     DPTQRGIGTGEQYRRSQILLQQTMSALDSCATSVPPANQATVDTARAIMSQRRKIS"
BASE COUNT          199 a          347 c          374 g          186 t
ORIGIN      
        1 cttccggtgg tgagccgggc gaacattcgc cacctgttgg ggattgtcac cttgcaggac
       61 gttctgcatg cgtacggtgt cgccacccgc tcgggatctc tcgactccca tgagtagccc
      121 cgctacgccc agtcggtccc ctgccgcttc ggcggggtct ttcatcggaa cgttcgcctt
      181 gatcctggcc gggatcgcag gactgttcgc gatcgacagc gtcctggccg aacacgaccg
      241 ggcggcgggg cggtcggagg ctcgacgcct ctatcaggag ggaatccgtc tggagcaaca
      301 aggggcgaca gtccaggcgg tggatcgcct gcgctccgcc gtatctgccg aacgccagaa
      361 tccactgtac cagcgcgccc tggcaaacgg cttgttggcg atggggaaga tcaccgatgc
      421 cgagaccgtt ctcaccgaac ggctgcagca cgatccggcg gatgccggag ccagtctgct
      481 catggcgcgg gccctggtac ggcaacgcaa gctgccgcag gcgatcgcct tttatcatcg
      541 ggcaatctac gggcagtggg aagaccggca gttgggtgat gcgttggagg cccggttcga
      601 gctggtcgat ctgctggcgc gggagaatgc ccgacaggag ctgctggccg agctgctgcc
      661 cctggaaact caggctccgg gagacatcgc gacccggcgg cgcatcgccc ggctgtttat
      721 cgcggcgggg tcaccgtccc acgccatcga gatctttcga gacgtgctgc accggaaccc
      781 tgaggacggc gaggcctacg ccggcatcgg tgaggcaaag ttccagcagg ggaactaccg
      841 ctccgctcag gccaacttcg cggcagcgca gaagctgatg ccagggaatc gggaggtcga
      901 ggcgcggctg gagctatgcc gcgaggtgct cgccctcgat ccgactcagc ggggcatcgg
      961 tacgggagag cagtaccgcc ggagtcagat attgctgcaa caaactatga gcgcactgga
     1021 tagctgcgcc acctcggttc caccggccaa tcaggcaacg gtggacacgg cccgggctat
     1081 catgtctcag agaaggaaga tcagcc
//
LOCUS       DASRPQ010002391         1907 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4351259, whole genome shotgun sequence.
ACCESSION   DASRPQ010002391 DASRPQ010000000
VERSION     DASRPQ010002391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1907
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4351259"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..554
                     /locus_tag="VFD73_26955"
     CDS             <1..554
                     /locus_tag="VFD73_26955"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="rRNA adenine dimethyltransferase family protein"
                     /protein_id="HZI77617.1"
                     /translation="ALDLDWHTLVPASFLVAGNIPYNITSPLLDKALRPPRPERIVLL
                     VQKEVADRLTASPGSDAYGALTVGVQSVATIEQLFSVPAGAFYPRPKVDSAVVRIVPR
                     AEPLVPDSARESFRRLVGGLFGFRRKQLVRALRELTGWDAESAAAPLREINIDPRSRP
                     EVLSAQQFVALHAALVDGGWSAR"
     gene            583..1203
                     /locus_tag="VFD73_26960"
     CDS             583..1203
                     /locus_tag="VFD73_26960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="HZI77618.1"
                     /translation="MRKVAESTVRRLSLYLRFLEEFEGQGVDTVSSGALASRGGTTSA
                     QVRKDLSFFGSFGKRGLGYPVPELANRLREILGLKRRYRVGMIGAGKIGSALVQYRGF
                     KQRGFDIVAIFDSDPAKIGHQWNGLTVLDIGRLERELAQKPVDMAVLVVPADVAQSVT
                     DRLIALGIKAILNFAPVQLTVPDDVVVKTVNLALELETLSYALASR"
     gene            1241..>1907
                     /locus_tag="VFD73_26965"
     CDS             1241..>1907
                     /locus_tag="VFD73_26965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacylase"
                     /protein_id="HZI77619.1"
                     /translation="MRLLLSLIIGGWLPATLASQQTPYDLLIQHGHIIDGTGSPWYSG
                     DVAIKDGRIAAIGSLMRASAADTIDAAGLVVAPGFIDMLGQSDLTILVNPHLPSKIFQ
                     GITTEFTGEGSSVAPLNDSIIAADRVSYEHLKITPDWRTLGEYFARLERQKIGINVGD
                     YVGATQVRRMVLGDDDRQPTADKLAKMKALVADAMRDGAVGLSTALEYPPAPYAKTDE
                     LVAL"
BASE COUNT          345 a          592 c          610 g          360 t
ORIGIN      
        1 atgcgctcga cctcgactgg cacacgctgg tgccggcctc gtttctcgtc gccggcaaca
       61 tcccctacaa cattacctcg ccgctgctgg ataaagcgct ccggccgccg cgtcccgaac
      121 gaattgtgct tctggtgcag aaggaggtgg ccgaccgtct caccgcgtcg ccggggagcg
      181 acgcgtacgg ggcgttaacg gtaggggtgc agtcggtggc tacgatcgag cagctcttct
      241 cggttccggc gggcgccttt tacccccgcc ccaaggtgga ttcggcagtg gtccggatcg
      301 tacctcgagc tgagccgctg gtgcctgaca gcgcgagaga gagcttccgt cgtttggtgg
      361 gcggcttgtt cgggttccgc cgcaagcagc tggtgcgcgc tcttcgggag ctgaccggat
      421 gggatgccga gtccgcagcc gcaccactga gagagatcaa catagatcca aggtcgcgac
      481 cagaggtttt gagcgcgcag cagttcgttg ccctccacgc tgccctcgtt gacggaggat
      541 ggagcgctcg gtagctttgt gaaacatttc acataatcgc cgatgcgcaa agttgctgaa
      601 tccaccgttc gccgcctctc gctgtacctc agatttctcg aagaatttga agggcagggc
      661 gtagacacgg tcagctccgg agcgttggcc tcccggggcg gcaccacatc ggcgcaggtg
      721 cggaaagatc tctcgttctt tggctcgttc gggaagcgcg gtctggggta tcccgttcct
      781 gaactggcca accggctccg ggaaatcctg ggactgaagc gccgctaccg ggtgggaatg
      841 atcggtgccg gaaagatcgg cagtgcgctg gtgcagtatc gcgggttcaa gcagcggggc
      901 ttcgacatcg tggcgatctt cgacagcgat ccggccaaga tcgggcatca gtggaacggc
      961 ctcactgtgc tcgacatcgg cagactggaa cgggagctgg cccagaagcc ggtcgacatg
     1021 gcagtgctgg tggtgccggc tgacgttgcg caatcggtga ccgaccggct gatcgcgctt
     1081 ggcatcaagg caatcctcaa cttcgcgccg gttcagctca cggtgccgga cgacgtggtg
     1141 gtcaagaccg tcaacctggc gctggagctg gagaccctga gttacgcgct ggccagccgt
     1201 tagcctgtcc agtcctgtct tcatcacaac cagaacgggt atgcgcctcc ttctctcatt
     1261 gatcatcggt ggctggcttc ccgccaccct cgcctcgcaa caaacgccgt acgacctcct
     1321 cattcagcac ggacacatca tcgacggcac cgggtctccc tggtatagcg gggacgtggc
     1381 catcaaggat ggccggatcg ccgcgatcgg gtcgctgatg cgggcgagcg cggccgacac
     1441 catcgatgcc gccggcctgg tggtggcacc cggcttcatc gacatgctgg ggcagtccga
     1501 tctgacgatt ctggtcaatc cacaccttcc ctcgaaaatc tttcagggga tcaccaccga
     1561 gtttaccggc gaagggtcca gcgtagcgcc actgaacgac agcatcattg ccgcggatcg
     1621 tgtctcctac gagcacctca aaatcactcc cgattggcga acgctgggcg agtacttcgc
     1681 ccggctcgag cgccagaaga tcgggatcaa tgtgggcgac tacgtcgggg cgacccaggt
     1741 gcgccgtatg gtactgggag atgacgatcg ccaacccacc gccgacaagc tggccaagat
     1801 gaaggcgctg gtcgctgacg ccatgcgcga cggggcagtg ggactttcaa ccgccctgga
     1861 gtatccgccg gcgccgtacg cgaaaacgga tgaactcgtc gccctgg
//
LOCUS       DASRPQ010002392         1008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1560088, whole genome shotgun sequence.
ACCESSION   DASRPQ010002392 DASRPQ010000000
VERSION     DASRPQ010002392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1560088"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..557)
                     /locus_tag="VFD73_26970"
     CDS             complement(<1..557)
                     /locus_tag="VFD73_26970"
                     /inference="COORDINATES: protein motif:HMM:NF017771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF899 family protein"
                     /protein_id="HZI77620.1"
                     /translation="MNARDQHHFTTDLDTAALPAVVDRATWQAELDALRVREKAHTRA
                     GDAIAATRRRLPMVAVDPTIQLVGPHGPVTLLEVFEGRRLLIVYFHMWHTGQPAEAQC
                     EGCTFSTTHITELSYLHSRDVTYATFCEGPYGESSRYRDFMGWTVPWYSVPQDAVDPL
                     IADRHFGILVSYLRDDDQVFETYWST"
     gene            complement(733..>1008)
                     /locus_tag="VFD73_26975"
     CDS             complement(733..>1008)
                     /locus_tag="VFD73_26975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77621.1"
                     /translation="LTTGSNHLATGFDVVVEGDAVPCTDVAVLERLNQMWSTLWGEDW
                     PIELRDGVFYETSGERRGEPLLVFAVTPTKIFAYARGDQWSQTRYQF"
BASE COUNT          184 a          315 c          316 g          193 t
ORIGIN      
        1 gtgctccagt aggtctcgaa gacctggtca tcgtcgcgga gatagctaac caggatgcca
       61 aagtgccggt ctgcgatcag cgggtccacg gcgtcctgcg gcaccgagta ccagggaacg
      121 gtccagccca tgaagtcgcg atagcgcgag ctctccccgt aaggtccctc gcagaacgtg
      181 gcataggtga cgtcgcggga atgcaggtac gacagctcgg tgatgtgggt ggtggagaag
      241 gtgcagccct cgcactgggc ttcggcaggt tgaccagtat gccacatgtg aaagtagacg
      301 atcagcagcc tgcgaccctc gaagacctcc agcagcgtga ccggtccgtg cgggccgacc
      361 agctggatgg tggggtccac cgccaccatc ggcagacgcc tccgcgtcgc cgcgatggca
      421 tcccctgcgc gggtgtgcgc cttttcccga acgcgcagcg cgtccagttc cgcctgccag
      481 gtggcccggt cgaccaccgc aggcagcgca gcagtatcga ggtctgtcgt gaaatggtgc
      541 tgatcacgtg cgttcatcgg tgtttccttt ctttgccctc ccgcttgcat gcgggatgac
      601 tgatggagag cgagcgaaga tgtgcttgcc aggcgcacgt atctctgttc tacgagcgga
      661 gcaagaagaa accttctccg atcttgcgct tctggccacc ccaagctgtg caacgaagtg
      721 caagacacgc tttcagaact ggtagcgggt ttggctccac tggtcgcccc tggcataggc
      781 gaagatcttg gtgggcgtga ccgcgaacac cagaagcggt tcccccctcc gttccccact
      841 tgtttcatag aagaccccgt cgcgcagctc gatgggccag tcctcgcccc acagcgtgct
      901 ccacatctgg ttgaggcgtt cgagcacggc cacgtcggtg catgggacgg catccccttc
      961 gaccacgacg tcaaatccag tggccaagtg gttgctgccg gtcgtcag
//
LOCUS       DASRPQ010002393         1232 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4351345, whole genome shotgun sequence.
ACCESSION   DASRPQ010002393 DASRPQ010000000
VERSION     DASRPQ010002393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4351345"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            142..606
                     /locus_tag="VFD73_26980"
     CDS             142..606
                     /locus_tag="VFD73_26980"
                     /inference="COORDINATES: protein motif:HMM:NF018430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1203 domain-containing protein"
                     /protein_id="HZI77622.1"
                     /translation="MPAYRIAGIPHSLATEARESLKSPQYGHPAHVELATGYGPCRLC
                     LRTFQEGVEQRLLFTYQPFTDPGALPAPGPVFIHLEACERYDGNDLPEALRALPLALD
                     GYGTGGELLLHRRVATESFEDVMAHVFEPEAVRYAHLRNAEAGCFIARIDRC"
     gene            complement(628..>1232)
                     /locus_tag="VFD73_26985"
     CDS             complement(628..>1232)
                     /locus_tag="VFD73_26985"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HZI77623.1"
                     /translation="IPGRFWINLRTTDLHSRYSLGDLTYHEAIPGHIWQGEYTHQMPL
                     IRQILSFNAYSEGWALYAEQLADELGAYENDPVGRLGYLQSIAFRACRLVVDTGIHAK
                     RWSREQGVQFFVDVNGSNPLEVASEVDRYCSWPGQACGYKVGHSEINRQREKAISTLG
                     SRYDLKAFDDAVVLGGNVPLDVLETNVDAYVGEAGKRRSG"
BASE COUNT          228 a          405 c          361 g          238 t
ORIGIN      
        1 ttcgacattt gggatctggt ggcggaggca gaaaacctga tgagtcagcg acgggggtga
       61 tcggcgaatt aagcgcaaga accgggaggc agccacgggc aggcgcgact atagtgtcat
      121 ggacctcttt ggagatgagc catgcccgcc tatcgcatcg ccggaattcc ccattctctg
      181 gctaccgagg caagggaatc gttgaagtca ccgcagtacg gccaccctgc ccacgtcgag
      241 ctggcgaccg gctacggtcc ctgccgactc tgccttcgca cgttccaaga aggcgtagag
      301 caacgcctgc tcttcaccta ccagccgttt accgaccccg gagcgcttcc cgcaccgggc
      361 cctgtgttca tccacttgga ggcatgtgag cgctacgacg gcaatgacct tcccgaagcg
      421 ctccgcgccc ttccgctggc gttggacggc tacgggactg gtggagagct cttgctgcac
      481 cgtcgggttg ctaccgaatc gttcgaggat gtcatggcac acgtcttcga gccggaagca
      541 gtccggtatg cccacctgcg caacgccgaa gccggctgct ttatcgcgcg aatcgatcgc
      601 tgctgacggg tgcgggtgca acggaggcta cccacttcgc cgctttcccg cttccccgac
      661 atacgcgtcg acgttcgtct ccagcacatc cagtggcaca ttccccccca acaccacagc
      721 atcgtcgaac gccttgagat cgtagcggga tccaagggtc gagatcgctt tctcccgctg
      781 ccggttgatc tcgctgtggc ccaccttgta cccgcacgcc tgccctggcc acgagcagta
      841 gcgatcgacc tcgctcgcca cctccagcgg atttgatccg ttcacgtcca cgaagaactg
      901 aaccccttgt tcccggctcc agcgctttgc gtggatgccg gtgtccacca ccaaccgaca
      961 cgcccggaag gcaatggact ggagatagcc gagtcgtccg accggatcgt tctcatacgc
     1021 gcccagctca tcagccagct gctcggcgta gagcgcccac ccctccgagt aggcattgaa
     1081 gctgaggatc tggcggatga gcggcatctg gtgggtatac tcgccctgcc agatatgccc
     1141 agggatcgcc tcgtgatagg tgagatcgcc gagactgtat cggctgtgga ggtccgtggt
     1201 cctgagattg atccagaaac ggcccgggat ct
//
LOCUS       DASRPQ010002394         1094 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_911655, whole genome shotgun sequence.
ACCESSION   DASRPQ010002394 DASRPQ010000000
VERSION     DASRPQ010002394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_911655"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(2..439)
                     /locus_tag="VFD73_26990"
     CDS             complement(2..439)
                     /locus_tag="VFD73_26990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77624.1"
                     /translation="MRHSSGLLRKLIPDLRYLRDAATSLAASWFSLRGLSVALPVEPA
                     VYDLLVTMPDGIKRVQVKTTTRYSKDAWAVVVGRRPYSVGNRERLIPYDPELIDWFFI
                     VDGDLAIYLIPSRVIAGRVGILLRTYSEYIVGNAAGLLAPKAA"
     gene            complement(697..771)
                     /locus_tag="VFD73_26995"
     tRNA            complement(697..771)
                     /locus_tag="VFD73_26995"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(734..736),aa:Pro,seq:ggg)
BASE COUNT          217 a          360 c          327 g          190 t
ORIGIN      
        1 atcaggcagc cttcggggcc aagagcccgg cggcgttacc cacgatgtac tcgctgtagg
       61 tccgcagcag aatgccgacc cgtcccgcga taacgcggct tggtatcagg taaatcgcaa
      121 ggtcgccgtc tacgatgaaa aaccagtcga tcaattctgg atcatacgga atcaggcgtt
      181 ctcggttgcc aaccgagtag ggtctacggc cgacgactac cgcccatgca tccttgctat
      241 accgtgtcgt cgtcttgacc tggactcgct ttatgccgtc cggcatcgtt accagcaggt
      301 cgtagaccgc aggttccacc ggcagtgcca cgctgagccc gcgcagcgag aaccaggatg
      361 cggcaaggga ggtggccgcg tcgcgtaggt accggagatc gggtatgagc ttgcgcagca
      421 acccgcttga gtgccgcatc cgaccatggc cgctgtccag tgaaatgaga ggtgtcaagc
      481 ccgagcaggg caacgcgacg cttaaccacc ctgagggatc cggctgatgt cacgcacaac
      541 ccaagttctc gcatgactcc gcgccatgat cttgatgccg tcacagcagt ggccagatcg
      601 gtatctgacc acttgcattc tttcgatgga tctcgcacca tgccggtacc ataacctcgg
      661 ttactgacat tttgcgcagc agtaaaccgt catttgtcgg gacgaggaga tttgaactcc
      721 tgctctcctg acccccagtc aggcgcctta accaagctgg gccacgtccc gccgcgccac
      781 cacgaaacct ccggtgccgc atacctaccg taccgcagca ggctcagtca gcttagcgca
      841 accggagccc cgctcggaac gaaccccagc cggccccgtg ccgccactcg gcgggacgcc
      901 gcgccgccgc tccgcgggtg cgtgatcccg ccggacgtga aagttacgat gtgccgggca
      961 cagctcaggc gccgtgctcg ttgtagtaac ggcgaggagc gacagccgcg cgggcgagcc
     1021 acacggaagg gctgggacag ttgggagcac tcgggactca gcgctcagcc tccgccggcg
     1081 acagttccgg gagc
//
LOCUS       DASRPQ010002395         1331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3756126, whole genome shotgun sequence.
ACCESSION   DASRPQ010002395 DASRPQ010000000
VERSION     DASRPQ010002395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3756126"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1045)
                     /locus_tag="VFD73_27000"
     CDS             complement(<1..1045)
                     /locus_tag="VFD73_27000"
                     /inference="COORDINATES: protein motif:HMM:TIGR01187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI77625.1"
                     /translation="MSGGDVQLIELVKRFGDTTAVDGIDLHIPAGEFFSLLGPSGCGK
                     TTTLRLIAGFEQPTAGRILLDGRDVARTPPHHRNVNTVFQSYALFPFLSVFDNVAFGL
                     RYKHISKSESAAKVREALALVQLTGFEKRRPSQLSGGQQQRVALARALVLNPSVLLLD
                     EPLGALDAKLRKALQIELKALQETVGITFIYVTHDQEEALTMSDRLAVMSNGRIQQIG
                     SPAEVYEEPSTAYVADFLGVSNLMSALGDGGGRLRLGDFPFTATRGDLSARGPARVVI
                     RPERVQLEDQGTPGDNRIPGMVERVLYVGSVIQVLVHLAHGETLQACIQNRGGDPPWQ
                     QGTAVSVHLPTDAI"
BASE COUNT          240 a          453 c          403 g          235 t
ORIGIN      
        1 ggatcgcgtc ggtgggcaga tggacgctca cggcggtccc ctgctgccag ggcgggtctc
       61 cgccacgatt ctggatgcag gcctgcaggg tctcgccatg cgctaggtga acgaggacct
      121 ggatgacgga gcccacgtag agcacgcgct cgaccattcc cggaatccgg ttgtcgcccg
      181 gggtcccctg gtcctcgagc tgaacccgct cgggccggat cacgactctc gccggtcccc
      241 gggcgctcag gtcaccacgg gtggccgtga acgggaaatc acccaggcgc aaccttcctc
      301 caccgtcccc cagtgccgac atcaggttgg acaccccgag gaagtcggcc acgtatgcgg
      361 tggacggctc ttcgtagacc tcagccgggc tgccaatctg ctggatcctg ccattcgaca
      421 tcacggcgag gcggtcggac atagtgagcg cctcctcctg atcgtgggtc acataaataa
      481 atgtgatccc gaccgtttcc tggagagcct tcagctctat ctgcagggcc ttccgcagct
      541 tcgcgtccag ggcccccagc ggctcatcaa gcaagagcac cgacgggttc aggacaaggg
      601 ccctggccag ggccacccgc tgctgctgcc ctccagagag ctggctgggc cgacgcttct
      661 caaaccccgt cagctgcacc aaggcgagcg cttcacggac cttcgcggcc gactcggatt
      721 tggagatgtg cttataccgg agcccgaagg ccacgttgtc gaatacggat aggaatggaa
      781 agagcgcata gctctggaac actgtgttca cgttccggtg atgcggcggc gtgcgtgcca
      841 cgtcccggcc atcgaggaga atacgccccg cggtgggttg ctcgaaaccc gcgatgagcc
      901 gaagcgtcgt ggttttcccg caccccgagg gacccaacag ggagaagaac tcccctgcgg
      961 ggatgtgcaa gtcgattccg tcgacagcgg tggtgtcgcc gaaccgcttc accagctcga
     1021 tcagctggac atcgccaccg gacaccgccg tcctccgatc acgctcaggc ccgaaccggc
     1081 cttcgacctc cacctgaacc ggtacgcgtc cgccctgtgc cccttttgcg ggaaagctta
     1141 gcagttccta gactgaacat tcagtcaaac tgtcacccgg gcacccgcag tcagcgttca
     1201 ggccagttgt agccaattta tgacctcggc aacgcgaggc tgtcaaccgc ggcccacccc
     1261 acgtagcgct ttccacgagc cagatcccgc cgttctacgc ggtgctgtcg ttcgtggtcg
     1321 ccgggctagg c
//
LOCUS       DASRPQ010002396         1806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1560733, whole genome shotgun sequence.
ACCESSION   DASRPQ010002396 DASRPQ010000000
VERSION     DASRPQ010002396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1806
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1560733"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..448
                     /locus_tag="VFD73_27005"
     CDS             <1..448
                     /locus_tag="VFD73_27005"
                     /inference="COORDINATES: protein motif:HMM:NF016906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NosD domain-containing protein"
                     /protein_id="HZI77626.1"
                     /translation="TVIGAATVGITSTNGSDNALLANVLIGSPIGISIVAPPSSADSS
                     LRYRIDDNVLARVEQGIVLQRTTRVQLRGNLFDRVGDGLVVDGDGHASEVSGNIFLRA
                     SRWFINAPDLAAGGNYWGTTDAAAATAKVRGRVSVLPWKPASAAGY"
     gene            complement(442..>1806)
                     /locus_tag="VFD73_27010"
     CDS             complement(442..>1806)
                     /locus_tag="VFD73_27010"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI77627.1"
                     /translation="RALANIAELPEEQLIGRDFTKLFPGASDAVATLIDAVYRRERTA
                     PLVVHLDQRQRVLRLTAAPLAGAESGSAVILIEDETEQRLLEAQIIQNDKMASIGQLV
                     SGVAHELNNPLTSITGLAELLLERPPHPELPRDHLRVIHDQAERAGRIVRNLLTFARK
                     GVAEKTAVDLNDVVTRTSLLIVYELQLHGIELESQLNPEPVVVLADRYELQQVLLNLV
                     TNAVQAVSALPPDKERRIILWTGCTAEEAILRVQDSGPGVPKHHAPYLFTPFFTTKAP
                     GEGTGLGLSLSYGLVKAHRGTLTYEPVPEGGAEFRISLPLYPADADFIADPESSVNGS
                     GSGRRILVVDEDPAVHRLISAVFTPDGHAVESARSGEQALRLARDGEWDLIIADMQMA
                     AGASQPFTRALLDLCPEFRERLVLACSGEEEPRPRGEEERLRRVRKPFNPRDLRSVAK
                     EIFQ"
BASE COUNT          333 a          551 c          595 g          327 t
ORIGIN      
        1 caccgtgatc ggggccgcta ctgtcgggat caccagtacc aacggcagtg acaacgcatt
       61 gctcgccaat gtgctgatcg gaagtcccat cgggatcagc atcgtggctc cgcccagttc
      121 ggccgattcc agtctccgat atcggatcga tgacaacgtg ctcgcgcgag tggagcaggg
      181 catcgtgctg cagcgcacca cccgggttca actgcggggc aatctgttcg acagggtggg
      241 agacggtctg gtcgtcgatg gggacggaca tgcgagcgaa gtgagtggca acatcttcct
      301 gcgggcatca cgatggttca tcaacgcgcc ggatctggcc gccggcggca actactgggg
      361 aaccaccgat gccgccgcgg ccaccgcgaa ggtccgtggc cgggtcagtg tgttgccgtg
      421 gaaacctgcg agtgcagcgg gttactgaaa aatttccttc gcgacagacc gcagatcgcg
      481 gggattgaat ggctttctga ctcgccggag ccgttcctcc tccccacgtg gccgaggctc
      541 ttcctcacca ctgcaggcga gcaccaggcg ctcccggaac tccgggcaga ggtcaagcag
      601 cgcgcgagtg aacggctggg atgcgcccgc ggccatctgc atatcggcga tgatgagatc
      661 ccattcgcca tcccgagcca gccgaagcgc ctgctcgccc gagcgggcag actcgaccgc
      721 atgaccgtca ggtgtgaaca ccgcgctgat cagccggtgg acggctggat cctcgtccac
      781 gaccaggatc cgacgccctg acccggagcc attcactgag gactcgggat cggcaatgaa
      841 atctgcatct gccgggtaga gcgggagcga aattcggaac tccgcgcctc cctccggcac
      901 aggctcatag gtgagggtcc cgcggtgggc tttcaccagt ccatagctca gcgacagacc
      961 gagaccggta ccctctccgg gagccttggt ggtgaagaac ggggtgaaca gatagggggc
     1021 gtgatgtttg ggaacccctg gtccactatc ctgaacccga agaatcgcct cctccgccgt
     1081 acagccagtc cagaggatga tccggcgctc cttgtcagga ggtaaagcgc tgaccgcctg
     1141 taccgcgttg gtcacgagat tgagcagtac ctgttgcaac tcgtagcggt cggcgagcac
     1201 cacgacgggc tccggattca actgtgactc cagttcgatc ccgtgaagct ggagctcgta
     1261 gacgattagc aatgacgtgc gggtgacgac atcgttcaga tccacggccg tcttttctgc
     1321 cacacctttg cgggcaaacg tcagcaggtt gcgaacgatt cggccggcac gctcggcctg
     1381 gtcgtgaatg acccgcagat ggtcgcgggg gagctccggg tggggcggac gctcgagcag
     1441 cagctccgcc agaccggtga tggaggtgag cggattgttg agctcgtggg cgacgccgga
     1501 gaccagctgg ccgatggaag ccatcttgtc gttctggatg atctgggcct ccagcagccg
     1561 ctgctcggtc tcatcttcaa tcaggatcac ggctgagccg ctttcggctc cggcgagcgg
     1621 tgctgcggtc aaacgcagga ctcgctggcg ctggtcgagg tgcaccacca gcggggcggt
     1681 tctttcccgc cggtagactg catcgatcag ggtggcgacg gcgtcggacg ctccgggaaa
     1741 gagtttcgtg aagtcccgac cgatgagctg ctcttccggc agctctgcaa tgttggcgag
     1801 cgcgcg
//
LOCUS       DASRPQ010002397         3734 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_912268, whole genome shotgun sequence.
ACCESSION   DASRPQ010002397 DASRPQ010000000
VERSION     DASRPQ010002397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3734
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_912268"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            349..1374
                     /locus_tag="VFD73_27015"
     CDS             349..1374
                     /locus_tag="VFD73_27015"
                     /inference="COORDINATES: protein motif:HMM:NF024946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HZI77628.1"
                     /translation="MTSSSGVQGNSFLQAHHWEFDASYRWLAAHPGDFFVGTTRTPLP
                     PSTQPPHGHQIVVDVHTLNLGMTYALTDRVRLSLSAPFQTGRISFFEDDNQRHTETST
                     GLGDLTLSGGAWLLNPRGSPNRNVMLGLGLKVPTGSYHDSVDFYTPTGIVQRPADPSI
                     QRGDGGWGVLMELQGYTQLLPGTIAYLSASYLLNPRVRTDVTIGQRIGLPGNSASGTV
                     PYHLSVPDAYSVRAGFSYAILPQQGLALSLGGRIDGVPVQDLINGGDDNFRRPGYSGF
                     VDTGLDLTRGSNTFTLNVPIRAHADRRANLYDRQVDIAGGGNLAKFEVLVSYTHRFGA
                     GGASEEQ"
     gene            complement(1358..3655)
                     /locus_tag="VFD73_27020"
     CDS             complement(1358..3655)
                     /locus_tag="VFD73_27020"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HZI77629.1"
                     /translation="MIEPRSIEVPSQLAAGALAGRYVIERELGRGGMATVYLAHDQKH
                     GRPVALKILHPDLARGLGPERFLREIKVAAGLSHPHILPLFDSGETEGLLYYVMPYVE
                     GESLRQRLAREPRLSVDEAVATSRAVASALDYAHQHGVVHRDIKPDNIMFHQGEAMVT
                     DFGIAKALSWTEDETLTQTGLLVGTPWYMSPEQSAGDTRLDGRSDIYSLGCVLYEMLA
                     GRKPFEAPSALAILSMHIADEPPPLTASRSDVPPAVEAAVLRALAKAPEDRFSTAAEF
                     GRALADSANLRGVVTDSAGAKPSAMNSIAVLPFLNLSADPENEYFADGMAEEIINALT
                     KLEGLRVTPRSSAFSLKGKGEAGREIGRRLKVATILEGSVRRAGSRIRLTTELISVAD
                     GYHLWSEKYDREMVDVFAIQDEISRSIVDVLKVKLLGSPTVPLVKRPTEDLEAYTTYL
                     KGRYFWNRRTPEGLRKSIALFREAQARDPGYALPYAGEADAYNVLGWWADLAPTIAFP
                     AARTAAARAVALDPALAEAYASQAFARLYYDWDWPNAEADFKQSIALNPKYSIARQWY
                     SQHLISSGRTEEASGQIRLAAELDPLSLIIQTTVSLIAYYAGQFDDSVTNAKRIIEND
                     PNFGIAHRILGRALLQLGQYDEGIAQLQRAVELSAFSVMLTAEVAHGHARAGHRAAAL
                     AILADLRRTAVERYVSAYDLAGIHIGLNDRASALDALEQACAERASHMIFLRVDPVFR
                     ELHGEPRFQAILGRIGAPVGLTAPR"
BASE COUNT          678 a         1197 c         1159 g          700 t
ORIGIN      
        1 acacctctgc cgcgcccgga ggtaccacct tgtgaagtcg aacaatcgga gtgtttccga
       61 tcgcgtcgag cgctgaggct tcggctatcc gcgggcgaga cgccatggcg ctgaattcct
      121 gatgaggctc gccaagtata gcacagtgcc gcttccgcga gtctgcggtc ttgtgaggac
      181 cggtaccgga ccgtacgttc aagccatcct gcagccttcc ttcgtggagg caccatgcaa
      241 tccccgcctc acgctctgcc ccgtctcctt acccggggtg ccttaaccat tgtctttctc
      301 ggcttcttca cccgggccgc ctcgggccag gggtgaatgc ccttcaggat gacatccagt
      361 tcgggtgtcc agggcaactc gttccttcag gcacatcact gggaattcga cgccagctac
      421 cgctggctcg ccgcgcatcc cggcgacttc tttgtcggga cgacccgcac accgctgcct
      481 ccttccaccc agccaccaca cggccaccag atcgtggtcg acgtgcatac cctcaacttg
      541 ggcatgacct acgcgctgac ggaccgggtc cggctcagcc tcagcgcgcc gttccagacc
      601 ggcaggattt cattctttga ggacgacaac cagcgacaca ccgagacatc gaccgggctc
      661 ggtgacctga cgctgagcgg cggtgcgtgg ctgctgaacc cgcgcggcag tccgaatcga
      721 aacgtgatgc ttgggttagg attgaaagtc ccgaccggga gttatcacga cagtgtcgac
      781 ttctacaccc ccaccggcat cgtccaacgg ccggccgacc catccattca gaggggagac
      841 ggtggctggg gagttctcat ggagctgcag ggctacaccc agctgcttcc cggcacgatc
      901 gcctacctat cggcgtccta tctgctgaac cccagggtgc gcactgacgt caccatcgga
      961 cagcggattg ggttgcccgg caactccgcc tcgggtacgg taccctatca tctctcggta
     1021 ccggacgcgt actcggtgcg agccggcttc tcgtacgcca tcctcccgca gcaggggttg
     1081 gctctgagtc tgggtgggcg gattgacggc gtgccggtac aggatctgat caatggagga
     1141 gatgacaact tccgccggcc cgggtacagc gggtttgttg ataccgggct cgatctgacc
     1201 cgcggatcga acaccttcac cttgaacgtg ccgatcaggg cgcacgccga ccgacgggcc
     1261 aacctgtacg atcgccaagt ggacatcgca gggggcggca atctggcaaa gttcgaggtc
     1321 ctcgtcagct acacgcaccg attcggtgcc ggaggcgcta gcgaggagca gtaaggccga
     1381 ccggggcccc gatccggccc agtatggcct gaaatcgcgg ttcgccatgg agctcacgaa
     1441 aaacaggatc gacccgcaga aagatcatgt gactagcacg ttcggcgcag gcctgctcca
     1501 gggcatcgag cgcgctcgcg cgatcgttta gcccgatgtg aattcctgcc agatcatacg
     1561 ccgagacgta ccgttcgacg gctgtgcgcc gcaggtcggc cagaatcgcg agggctgcgg
     1621 ctcggtgacc ggctcgcgcg tggccgtgcg cgacctctgc ggtgagcatg accgagaacg
     1681 cagaaagctc cactgccctc tgtaactgcg cgatcccctc atcgtactgg ccgagctgta
     1741 gcaacgcgcg ccccaggatg cggtgggcga taccgaagtt gggatcgttc tcgatgatgc
     1801 gcttggcatt ggtcaccgaa tcgtcgaact gccccgcgta gtaagcgatc aaggacactg
     1861 ttgtctggat gatcaacgac agtggatcga gctcggcggc gagccgtatt tgcccactgg
     1921 cctcctcagt ccgtccggaa gagatgaggt gctgagaata ccactgccgc gcgatagaat
     1981 atttcggatt cagcgcgatg gactgcttga agtcggcctc ggcgttcggc cagtcccaat
     2041 cgtagtacag ccgagcaaag gcctgggagg cgtacgcttc ggcaagggca ggatccagcg
     2101 ccacggctcg agccgccgcg gtccgcgctg ccgggaacgc aatggttggc gcgagatcgg
     2161 cccaccagcc aagcacattg taggcgtctg cctcccctgc atagggaagc gcgtacccag
     2221 ggtcacgcgc ttgcgcctcg cgaaacagcg ctatgctttt tctcaagccc tcaggagttc
     2281 ttcggttcca gaaatacctg cccttcagat aagtagtgta cgcctccaga tcctcggtgg
     2341 gccgcttcac cagtggcaca gttggtgacc caagcagctt caccttcagg acgtccacga
     2401 tcgatcgcga gatctcgtcc tgaatggcga agacgtcgac catctcccga tcgtactttt
     2461 ccgaccagag gtgatacccg tccgccacac tgatcaactc ggtggtgagc cgaatccggc
     2521 tccccgcccg gcggacgctc ccctcgagga tcgtcgccac cttgaggcgt cgtccgatct
     2581 cccgtcccgc ttctcctttg cccttcaaac tgaaggctga gctccgaggg gtgactcgaa
     2641 gcccctcgag cttggtgagt gcgttgatga tttcctcggc cattccatcg gcgaagtact
     2701 cgttctcggg atcggcgctc agattcagga aggggagcac cgcgatcgaa ttcattgctg
     2761 aaggtttcgc gccggcgctg tctgtcacca ccccgcgcaa gttcgccgaa tcggccaggg
     2821 cccggccgaa ttccgctgcg gtagaaaagc gatcctccgg cgccttggcc aacgcccgca
     2881 ggactgctgc ttccactgcc ggaggcacat cggaccgcga tgcggtgagt ggcgggggtt
     2941 cgtcggcgat gtgcatcgag agaatggcca gggcgctggg ggcctcgaac ggcttccggc
     3001 cggcgagcat ctcgtagagc acgcagccga ggctgtagat atcgctgcgt ccgtccaggc
     3061 gagtatcgcc cgcggattgc tccgggctca tgtaccaggg agtgccgacg agaaggccgg
     3121 tctgggtgag ggtctcgtcc tcggtccagc tgagggcctt ggcgatgccg aagtcggtca
     3181 ccatggcctc gccttgatgg aacatgatgt tgtcgggctt gatgtcccgg tggacaactc
     3241 cgtgttgatg agcgtaatcc agggccgacg ccacggcgcg actggtcgcg acggcttcgt
     3301 cgacgctcag cctgggctca cgcgcgagcc gctggcgcaa tgactcacct tccacatacg
     3361 gcatcacata gtagagcagg ccctcggtct cgcccgagtc gaagagcgga aggatatgag
     3421 gatggctgag gccggccgcc accttgatct cgcgaagaaa gcgctcggga cccaggcctc
     3481 tcgcgagatc aggatgaagg atcttcaacg ccaccgggcg gccgtgcttt tggtcgtggg
     3541 ccaggtagac ggtggccatt ccgccacggc ccagctcgcg ctcgatgacg taccggcctg
     3601 ccagggctcc cgcggcgagt tggctcggga cttcgatgct tcggggttcg atcaaggagg
     3661 caggcccacc cggtgtacca atgacgcaaa gcgaggatca ccgcgcagcg gcttccatct
     3721 gagatcccga ttga
//
LOCUS       DASRPQ010002398         1036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4047833, whole genome shotgun sequence.
ACCESSION   DASRPQ010002398 DASRPQ010000000
VERSION     DASRPQ010002398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4047833"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..268
                     /locus_tag="VFD73_27025"
     CDS             <1..268
                     /locus_tag="VFD73_27025"
                     /inference="COORDINATES: protein motif:HMM:NF017198.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YiaA/YiaB family inner membrane protein"
                     /protein_id="HZI77630.1"
                     /translation="DLEGIPVTPIYLGLCWASVLISIVLLSVGLWNAELTLSEKGFYA
                     MSFVLSLFAAITVQKNTRDTLASDRARPAQPQESPASGLGLFDR"
     gene            complement(475..939)
                     /locus_tag="VFD73_27030"
     CDS             complement(475..939)
                     /locus_tag="VFD73_27030"
                     /inference="COORDINATES: protein motif:HMM:NF018184.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GyrI-like domain-containing protein"
                     /protein_id="HZI77631.1"
                     /translation="MIDTPQIVQTSEQLFASIHVTVPRAQIQEVMGPGFEELLSTVAA
                     QGITPTGPWFTHHFRMDPEVFDFEICVPVAQPVVPAGRVQPGRLPGATVARTIYHGDY
                     AGLGDAWGEFDSWIAGQGRAPAGDLWESYTTGPESSPNPADWRTELSRTLAG"
BASE COUNT          181 a          337 c          328 g          190 t
ORIGIN      
        1 cgatcttgaa ggcatcccgg tcacgccgat ctatctgggc ctatgctggg cctcggtgct
       61 catatcgatc gtgctcctgt cggtcggcct gtggaacgcg gagctgacgc tgagcgagaa
      121 gggtttctac gccatgtcgt tcgtgctgag cctgttcgcg gcgatcacgg ttcagaagaa
      181 cacccgcgac accctggcca gcgaccgcgc ccgcccggcc cagccgcagg agagcccggc
      241 gagcgggctg ggcttgttcg atcgatagct taaaccacta agacgccaag atcgccagga
      301 tatattaggc agtttgctct cggcgccgca atacctttgc tgatggggca ggcaagctca
      361 acaaagccgc aaagacacca agatctgcga aaagatcttg gtgtctttgc ggctttgcgt
      421 gagcagatcg attccgagcc agccaaccag cattattatg cgctaccgcg aggcttagcc
      481 agccagcgtc cggctcagct cggtgcgcca gtcggccggg ttggggctag actccggccc
      541 ggtggtgtag ctctcccaca aatccccagc tggcgcgcga ccttgccccg cgatccaaga
      601 gtcgaactca ccccaggcgt cgccaagccc cgcatagtcg ccatggtaga ttgtgcgcgc
      661 cacggtggcg ccgggcagcc ggcccggctg cacgcgcccg gccgggacca ccggctgcgc
      721 gaccggcacg cagatctcga agtcgaagac ctccgggtcc atccggaagt ggtgcgtgaa
      781 ccacggaccg gtcggggtga tcccctgtgc ggcgacggtg ctcagcagtt cctcgaagcc
      841 cggccccatc acctcctgga tctgcgcgcg cgggacggtc acgtggatgc tggcgaacag
      901 ctgctcgctc gtctgcacga tctgcggtgt gtcgatcatg gtgtctcctt atgctaccgc
      961 tctggccagc cgagcggcgc tcgctttact aagtagtcgg gcgaccggcc atggattcga
     1021 catggcgtgg tgagca
//
LOCUS       DASRPQ010002399         2235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4047874, whole genome shotgun sequence.
ACCESSION   DASRPQ010002399 DASRPQ010000000
VERSION     DASRPQ010002399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4047874"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..362
                     /locus_tag="VFD73_27035"
     CDS             <1..362
                     /locus_tag="VFD73_27035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HZI77632.1"
                     /translation="RLFVTVAALSGLIAVAAGAFGAHALRERLSPEYLAVFDTAARYQ
                     MYHALGLIAAGWASTRWPGPVVQWSGWLFIIGTVLFSGSLYALAVSGVRWLGAITPLG
                     GLAFMAGWLCLALSAKR"
     gene            complement(381..1178)
                     /locus_tag="VFD73_27040"
     CDS             complement(381..1178)
                     /locus_tag="VFD73_27040"
                     /inference="COORDINATES: protein motif:HMM:NF021214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HZI77633.1"
                     /translation="MDPRPRPTTPYDWTWSFHPSVLIGTGLLGALYFYGIGPLRRKYG
                     WGPPASAAQIVSFSAALLILLLALNGPVHDLSDYYLFSVHMVQHLVLTLVFPPLLIAG
                     IPGWLLRPLALKRGVYPIARMLSRPWVAALLFSLSIAVWHLQPFYDLMMRDHGVHVFT
                     HLMFMVTATIMWWPVMSSLPELPRLSPLAGILYLFLVCLPMQVVGAFITFAGDVLYPW
                     YTAAPRTWGLSPLDDQRLGGLLMWIPGNLWIFGAIAVLFFRWSREDA"
     gene            complement(1341..1700)
                     /locus_tag="VFD73_27045"
     CDS             complement(1341..1700)
                     /locus_tag="VFD73_27045"
                     /inference="COORDINATES: protein motif:HMM:NF015582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit IV family protein"
                     /protein_id="HZI77634.1"
                     /translation="MDAHTTSVAHEEHAHPRAAVYAKVGLVLFVLTALEVGLYEITYG
                     EHAGASASAIQPFFVPLLLLLSAFKFALVAMFYMHLKQDSRLFSGIFVFPLTIAAVII
                     IGLMVLMAYHMAFAKSG"
     gene            complement(1710..>2235)
                     /locus_tag="VFD73_27050"
     CDS             complement(1710..>2235)
                     /locus_tag="VFD73_27050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HZI77635.1"
                     /translation="ASLISNYVVNKGRSLVGPFPHEPWTSPSGEHFKPILEIPLVTLG
                     TALLLFSSLFVVLALSGAQRGSRKALVGWLAATIFCGMFFVGMQVYEFTHFVHEGLTL
                     KTNLFGASFFTLTGFHGTHVTIGVIWLITLWILAIRGKIPPAKSLNLEMAALYWHFVD
                     VVWIVIFPVVYLIK"
BASE COUNT          488 a          648 c          720 g          379 t
ORIGIN      
        1 accggctttt tgtcacggtg gccgcgctgt cgggcctcat cgctgttgcc gcgggtgcgt
       61 tcggggcgca cgcgctgaga gagcgtctct cgccggagta cctggccgtc ttcgacacag
      121 ccgcccgata ccagatgtac cacgcgcttg gcctcatcgc cgccggctgg gcgagcaccc
      181 gctggcctgg accggtcgtt cagtggtccg gctggctctt catcattggc acggtgctgt
      241 tttccggaag tctctacgcg ctggcggtga gtggggttcg ctggctgggc gccatcactc
      301 cgctgggagg cctcgccttc atggcagggt ggctctgcct tgctctctca gccaaacgct
      361 agctcctcgc ttcccggctc ctaggcgtcc tctctcgacc atctgaagaa caacacggcg
      421 atcgcaccga agatccagag attgccggga atccacatca acaagccgcc gagccgttgg
      481 tcgtccagcg gcgaaaggcc ccaggtcctc ggtgcggcgg tataccaggg gtacaacacg
      541 tcgccggcga aggtgatgaa ggcacccacc acctgcatgg gcaggcagac gagaaagaga
      601 tagagaatgc cggcgagcgg agacagtcga gggagctcgg ggagagagct catcaccggc
      661 caccacatga tcgtcgccgt caccatgaac atcaggtggg tgaagacgtg cacgccgtga
      721 tctcgcatca tcaagtcata aaacggctga agatgccaca ctgcgatgga aaggctgaag
      781 aggagcgccg ccacccatgg acggctcagc atccgggcga tcgggtagac tccccgtttg
      841 agcgccaatg gccgcagtag ccagccagga attcccgcga tcaagagcgg agggaatact
      901 agggtcagca ccaggtgctg caccatgtgg acggagaaca ggtaatagtc gctgagatcg
      961 tggaccgggc cgttcagcgc caggagtaat atcagcagcg cggcggagaa tgaaacaatc
     1021 tgcgccgctg aggccggcgg gccccagccg tacttccggc gcaagggacc gatgccgtaa
     1081 aagtacaagg caccgagaag tccggtgccg atgagaacgc tgggatgaaa cgaccaggtc
     1141 cagtcgtacg gtgtggtcgg tcgcgggcgt gggtccatgt gagaaagcta tcagctattg
     1201 gccttcagtc gtcagcaagg gcagcctggc actgcgccgc cttggccgta cccgaattca
     1261 gcctcacgat ttagagctgg tatctatagg gatgaccgac gactgacgac cgacgactga
     1321 cgactgacga cgccgatcca ctaccccgac ttggcgaacg ccatgtggta tgccatcaag
     1381 accatcaggc ctatgatgat gacagcggcg atggtgagag gaaagacaaa gatcccgctg
     1441 aagagacggc tgtcctgctt caggtgcatg tagaacattg ccacgagggc gaacttgaat
     1501 gccgagagga ggagcagcag aggaacgaag aacggctgga tggcagaggc gctggcgccg
     1561 gcatgctcac cgtacgtgat ctcgtagaga ccaacttcca gagcggtcag gacgaacagg
     1621 accagcccga ctttggcata gactgccgcc ctggggtggg cgtgctcctc gtgggcaacg
     1681 gaagtggtgt gagcatccat acgatcgcct tacttgatga ggtacaccac aggaaagatc
     1741 acgatccaga ccacgtccac gaaatgccag tagagcgccg ccatctcgag gttgagtgac
     1801 ttggccggcg gaatttttcc ccggattgcc aggatccaca gggtgatcag ccagatcacg
     1861 ccgatcgtga cgtgggttcc gtgaaacccc gtcagggtaa agaagctggc gccgaagaga
     1921 ttggtcttga gcgtgagccc ttcatggacg aaatgggtga actcgtacac ctgcatgccg
     1981 acgaagaaca tgccgcagaa gatggtcgcg gcgagccacc ccaccagcgc cttgcggctt
     2041 ccgcgctgcg cgccgctcag tgccagcacc acaaacagtg agctgaacag caggagggcg
     2101 gttcccagag tgacaagcgg gatctcgagg attggcttga aatgctcgcc gctgggcgag
     2161 gtccatggct cgtgcggaaa cggaccgacc aggctgcggc ccttgttgac gacataattg
     2221 gagatcaggc tcgcg
//
LOCUS       DASRPQ010002400         1205 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1220831, whole genome shotgun sequence.
ACCESSION   DASRPQ010002400 DASRPQ010000000
VERSION     DASRPQ010002400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1220831"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            771..>1205
                     /locus_tag="VFD73_27055"
     CDS             771..>1205
                     /locus_tag="VFD73_27055"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZI77636.1"
                     /translation="MRAQHLRVAPPPGDLQVAIYARVSSDQQAERHTIDSQLAELKAR
                     VGQDGYQIRDDMLFVDNGHSGASLIRPALERLRDLAALSALDVVYVHAPERLARSYAH
                     QVLLLEEFARADTQVVFLNRPIGDTPEDSLLLQLQGMFAEYER"
BASE COUNT          234 a          412 c          360 g          199 t
ORIGIN      
        1 cagccttcga agctgggggt tgcaggttca agtcctgctg cggtcgccag cctgcaaaac
       61 gacaaagccc ctccctggcc gaagctaaga gaggggcaag tcggaaagcg cataagtcgg
      121 gggcactttc cggccagcac cttagagcag accgtgccgg cattacggcc aagcttgggc
      181 ggcaggaggg cacgtgcaat caagtgccct gaaaaggcgg cccctctcca cctgagtgag
      241 attaagcggc cggcccaaag tccccgctac ggatatcgct ccgaccgcac cctgctgttc
      301 tgcgcccgct gaaatcctgg aacaggtaga agccgttcag ccgcacgcca tggcacgccg
      361 ccagcacgtc aaacccaacc ggagccgcag ccgcttcggc taacttgcga tcaaagctcc
      421 aggcccgctc ggcaatgaag cgcggaacct cgcagtgacg tgctagacaa tgtggcaaag
      481 ttttcgatcg gctttgttca taccatcgca cgcgaggcac tccgccgctg cccgcgagct
      541 ggccctatgt tgaaggacgc atcccgatct ggacgggcca gaccggttca ggatggggtc
      601 catcatggcc aagccatcca ggggacgccg gcccctcagc cttgaggtcg gcttcgaggt
      661 gggacggagc ggtcgagacg ccctggggcg tgcctacgag cgcctgctgc catcgctcgc
      721 ccgatcactg cctccgagcc caccggcaac gctcgccaaa ggagcgcatc atgagagccc
      781 agcatctcag agtagcccct cctccagggg atctgcaggt ggccatctac gctcgtgtct
      841 cgtccgatca gcaggctgag cgccacacca tcgacagcca actcgccgag ctcaaagccc
      901 gagtcgggca ggatggctat cagatccgcg acgacatgct gttcgtcgac aacggccaca
      961 gcggtgccag tttgatccga ccggccctgg agcgattgcg tgatctcgcg gccttgtcgg
     1021 cgcttgatgt cgtctacgtc cacgccccgg agcgcctcgc ccgcagctat gcgcatcagg
     1081 tcctcttgct cgaggagttc gcccgcgccg acacgcaggt cgtcttcctc aatcgcccga
     1141 tcggcgacac gcctgaggac agcctgctgc tccaactcca aggcatgttc gccgaatacg
     1201 agcgg
//
LOCUS       DASRPQ010002401         1568 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_913331, whole genome shotgun sequence.
ACCESSION   DASRPQ010002401 DASRPQ010000000
VERSION     DASRPQ010002401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_913331"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            494..>1568
                     /locus_tag="VFD73_27060"
     CDS             494..>1568
                     /locus_tag="VFD73_27060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77637.1"
                     /translation="MDKESTPFADSPASGSRSFNPEQDSHDSVQFHSDVHQAGKQDVE
                     LYIRTYNTMLRSSGEIKVKALVQAHVGADSSLHVNAAAPEPDMSALMYCVQRLPNAIM
                     HVRHILLGQSAAVFHRAGYRVEEWESVHAPGRRRHWFFDQQDTMAVYVNSASDVDDLV
                     PTLTGFQIEWNKFHRLFNEEANTLELLATIHRAPPALYGEMVKLLEKRLLIASEDWER
                     LEALWGEDIWQNLRLIAQAEKSFTVRMLGGTYIGYAKATEEWWAPVDRLLEKRGLCDR
                     PVYFVSSNIHALVNLLGGSILGERANIEDFILNSRDPELTTEYEKLMKGQVRSSVENL
                     LYYASRRYYLETDAGREAYKGRTR"
BASE COUNT          321 a          510 c          459 g          278 t
ORIGIN      
        1 ggcccacagg atcaggtagg cggcgagggt gaagacgtgg gccgccaggc ccagcaccac
       61 gacacccagg cgcaccagcg tcacgtcgag gccgaagtag tcggccagcc cggcgcagac
      121 cccgccgagc atcttgtggc tctcatcccg atagaggtgc ttagtcgaaa ccatgatagt
      181 tgctccttcc ttaacgaccg ggcgtcccaa tgacgccgtt gtatccgctc gataccgggg
      241 gccgtatgtg gcgcccctgt cttgttcatc gctataaatt acgtgcccgg ccccaggcgg
      301 gttacaccgc ggcccggtcg cggagccgat cagggccggg acatttgccc cagcggcgag
      361 gtgcgcatct tgacgggtca gggggcttgc aatacaatag ctagaaccag atttatgata
      421 cgcatctaac acaacatgtg atcaatatga caattgcgtc atgtggcgat gaagccaccg
      481 gaaaggagat cccatggata aggagtctac gcccttcgcc gactccccgg ctagtggatc
      541 ccgatcgttc aaccccgaac aggactcgca tgacagcgtc cagttccatt ccgacgtgca
      601 tcaggccggc aagcaggatg tcgagttgta catccgcaca tacaacacca tgctgcgctc
      661 ctccggcgag attaaggtca aggctctggt acaggcccat gtcggcgccg actccagcct
      721 gcacgtcaac gccgccgcgc ccgaacccga tatgtcggcg ctcatgtatt gcgtgcagcg
      781 gttgccgaac gccatcatgc acgtgcggca tattttgcta ggccaatcgg cagccgtatt
      841 ccaccgcgcc ggctaccgcg tcgaggagtg ggaaagcgtc cacgcgcccg gccgccgccg
      901 ccactggttc ttcgaccagc aagacacgat ggccgtgtat gtcaacagcg cgtccgacgt
      961 cgacgatctg gtgcccacgc tcaccggctt ccagatcgag tggaacaagt tccaccggct
     1021 attcaacgaa gaggccaaca ccctggagct gctcgccacc atccacaggg ccccgcccgc
     1081 cctttacggc gagatggtca agctgctgga gaagcgcctg ctcattgctt ccgaagactg
     1141 ggagcgcctg gaggccctct ggggtgagga tatctggcag aatctccgcc tcatcgccca
     1201 ggccgagaag agctttacag tgcgcatgct cggcggcacc tacatcggtt acgccaaggc
     1261 taccgaggag tggtgggcgc ccgtggaccg cctgcttgag aagcgcggcc tctgcgacag
     1321 gccggtgtac ttcgtgtcgt ccaacatcca tgccctggtg aacctgctcg gcggcagcat
     1381 cctgggtgag cgcgccaaca tagaggactt catccttaat tcgagagacc ccgagctcac
     1441 caccgagtat gaaaagctca tgaagggcca ggtgcgctcc agcgtggaga atctgcttta
     1501 ctacgcttcc cgccgctact acctggaaac cgacgcgggc cgcgaggcct ataaaggccg
     1561 cacccgcc
//
LOCUS       DASRPQ010002402         2711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_596609, whole genome shotgun sequence.
ACCESSION   DASRPQ010002402 DASRPQ010000000
VERSION     DASRPQ010002402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2711
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_596609"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            97..1023
                     /locus_tag="VFD73_27065"
     CDS             97..1023
                     /locus_tag="VFD73_27065"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI77638.1"
                     /translation="MDGQGHLGVSVVICAYSDRRWQQTCAAVKSVLAQQPPPAEVLLV
                     VDHNAKLAERARSELTDVTILENEGNQGLSDARNTGLRAASQPITAFLDDDAEARPGW
                     LASLIEPYRSPDVVGTGGAVLPKWPDAPPRWLPPEFYWVVGCSYRGLPVSVDPVRNPI
                     GASMSVQTALTLTVGGFDSVVGRVGTRPTGCEETELAIRLTAAKSASVILYVPTAEVD
                     HHVGQERLKVKYFLRRCWHEGISKASVVRLAGASAGLESERRYVTAVLPAALLRNLRH
                     GLTGDMGAFMRFAMVLAGLTSTATGYLSGKMR"
     gene            complement(1029..2036)
                     /gene="galE"
                     /locus_tag="VFD73_27070"
     CDS             complement(1029..2036)
                     /gene="galE"
                     /locus_tag="VFD73_27070"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HZI77639.1"
                     /translation="MKVLIAGGAGFIGSTIASACLDAAIKPVILDNLATGRREFVADR
                     DFYKGDIADGQLVDGIFKDHPDIDAVIHCAALIVVPESVADPVTYYRANVVKSLEFVD
                     HLMRNGCERLIFSSSAAIYGAGADLTVDENSPINPQSPYARTKAVCEAMFADIAAAQP
                     IRVLSLRYFNPIGADPKMRTGLQLSRPTHALGRMMQALEDGVAFQVTGTDYPTRDGSG
                     IRDYIHVWDLAAAHVAALSRFDALLAPMSTSIAINLGTGTGTTVREFLDAFNEVASVP
                     IRAQDAKRRPGDVAGAYTRTERAVRMLDWQPEYSIADGIRHSLQWAARRHEVLSGEAP
                     L"
     gene            2387..>2711
                     /locus_tag="VFD73_27075"
     CDS             2387..>2711
                     /locus_tag="VFD73_27075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77640.1"
                     /translation="MTPTSRPAAVRAHIMVVVMENQSYNQIIGNSSAPYINLIADRYL
                     RATNSYARGHYSLPNYLEMISGRAYEASGTANDCTPSSCGPVTGTNVTDQLAAAGIRW
                     MAFMGA"
BASE COUNT          490 a          833 c          856 g          532 t
ORIGIN      
        1 tgtcggcctg agctgtgaat cgactcgtcg gatccagctg aggaaggggt gggtccttcg
       61 gaaacgaagg ggagggcggc cgcagcaccc gaggtgatgg acgggcaggg ccatctcggc
      121 gtgagcgttg tcatctgcgc gtacagtgat cgcagatggc aacagacatg cgctgcagtt
      181 aagtctgtgc tcgcacagca gccgccgcct gcggaggtac tgctggtggt tgaccacaat
      241 gccaagctgg ccgaacgagc ccgcagtgag ctcactgacg tgacaatcct tgagaacgag
      301 ggaaaccagg gattgtccga cgctcgcaat accggacttc gagcggcgtc tcagcccata
      361 accgccttcc ttgacgatga cgcggaggcg cgtccgggct ggctggcatc gttgatcgaa
      421 ccgtaccgtt cgcctgatgt cgtgggtacc ggaggcgccg tgcttccaaa gtggcccgat
      481 gctccgcccc gttggctgcc gccggagttc tactgggtcg tcgggtgcag ttaccgtggc
      541 ctaccagttt cggtggatcc tgtgcgaaac ccgatcgggg ccagcatgag cgtgcaaacc
      601 gccctgaccc tcacggtagg cggcttcgac agcgtggtcg gccgagtggg tacgcggccc
      661 actgggtgtg aggagactga actggccatc cggctcacgg ccgccaagtc ggcgtcggtt
      721 atcctctacg tgccgaccgc cgaggtcgac caccatgtgg ggcaagagcg cctcaaagtg
      781 aagtacttcc tgcgtcgatg ctggcatgag ggaatctcga aagccagcgt tgtccggctg
      841 gccggcgcgt ctgctggact cgagagcgaa cgaaggtatg tcactgcggt ccttcccgcc
      901 gccttgctgc gaaaccttcg ccatggtctc accggtgaca tgggtgcatt catgaggttc
      961 gccatggtac tggccgggct cacctctact gcgaccggct atctgtccgg gaaaatgcgg
     1021 taagagcact acagcggcgc ctcgccggat agcacctcat ggcgccgggc ggcccactgc
     1081 agagagtgac ggatgccatc ggcaatgctg tactccggct gccagtcgag cattctcacc
     1141 gcccgctcag tgcgggtata ggcgcctgcc acgtcgcccg gtcgccgttt agcgtcttgg
     1201 gcccggatcg gcacgctggc cacttcgttg aatgcatcaa ggaactcgcg gacggtggtg
     1261 cccgtgccgg tgcccagatt gatcgcgatt gaggtgctca ttggggccag cagggcgtcg
     1321 aacctgctca gcgccgcgac atgagcggca gcaaggtccc agacatgaat gtagtccctg
     1381 atgcctgatc cgtccctggt cgggtagtca gtcccggtga cctgaaacgc gacgccatcc
     1441 tccagggcct gcatcatccg gccgagagcg tgggttggtc tcgacagttg cagtccggtg
     1501 cgcatcttgg ggtccgcccc gatcggattg aagtatcgca gggagagcac gcggataggc
     1561 tgcgcggcag cgatgtccgc gaacatggcc tcgcatacgg ccttcgtccg ggcgtacggg
     1621 ctctgcgggt tgatggggga gttctcatcg acggtcagat cggcgcccgc gccgtagatg
     1681 gcagcggagg aactgaagat caggcgttcg catccgttgc gcatcaggtg gtcaacgaac
     1741 tcgaggctct tcacgacatt cgctcggtaa tatgtcactg gatcggccac tgactccggg
     1801 accacgatca gtgccgcgca gtggatgacg gcatcgatgt ctggatggtc cttgaatatg
     1861 ccatcaacta gctggccatc cgcgatgtca cccttgtaga agtcccggtc ggcgacgaac
     1921 tcccgcctgc cggtcgcgag gttgtcaagg attaccggct tgatagccgc gtcgaggcag
     1981 gccgatgcaa ttgtgctgcc aatgaacccg gccccgcctg caattagaac cttcaatacc
     2041 tcacaccctc tatcttgccg ccgcttactc aacccccagg ctagcttgcc cgtccagggc
     2101 cggtgtggac cggacgataa atcggcaggc cagccgagta tcctgatgtt actttaagtt
     2161 actttaagag cgtagagcgc tagaggtcgg tccgcggcct tactctggct acatgatcgg
     2221 ctcgccatgt tccggctctc agcccgcctc cgggaacgcg ccgaagccct ggcgtcgtct
     2281 tgtccggttt tcggccttcg cggccggatg cgtcctgctc tgctcctgtt cgacctcgtt
     2341 gccgccatct gttcagaccg tcccctcgac gacaacgagc acgcccgtga cgccgaccag
     2401 ccgcccggcc gcggtcaggg cgcacattat ggtcgtggta atggaaaatc aaagctataa
     2461 ccagattatc ggcaacagtt ctgctcccta catcaatctc atcgccgata gatacttgcg
     2521 tgcgacgaac tcatatgcgc gtgggcatta cagcttgccc aactacctcg agatgatttc
     2581 tggacgggct tatgaggcaa gcggcacggc gaacgactgt acgccgtcga gctgcggccc
     2641 ggtcaccggc accaatgtca ccgatcaact ggcggccgcc gggatcaggt ggatggcttt
     2701 catgggcgcg a
//
LOCUS       DASRPQ010002403         1044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4353530, whole genome shotgun sequence.
ACCESSION   DASRPQ010002403 DASRPQ010000000
VERSION     DASRPQ010002403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4353530"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..598
                     /locus_tag="VFD73_27080"
     CDS             <1..598
                     /locus_tag="VFD73_27080"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZI77641.1"
                     /translation="GVAGEFRIRTRPLRQEVHSVPAPADYARGELGPAVTDGDLGTYF
                     RSHFGGQLIVGSAEPECDALHWIDDPDDFEAQPTAQAWDSQVLRLARRIPSLGIPPRP
                     VGFAALYDVADDWIPVYDRTSLAGFYVAIGTSCNQFKNAPVAGRFMAALVHACENGHD
                     HDSDPVLFSGPFTKNEINLGHYSRLRQPHAESANNVMG"
     gene            complement(745..>1044)
                     /locus_tag="VFD73_27085"
     CDS             complement(745..>1044)
                     /locus_tag="VFD73_27085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77642.1"
                     /translation="SGPKQWVSYVAPAQWGFAGTASTVNLKTLLPPHSSTETIWAHTP
                     SAWLLAVGMQVALAGVFAFIAWWRLIQISPGRSRRPARLPTAVPSGRPAYLTGHR"
BASE COUNT          191 a          332 c          345 g          176 t
ORIGIN      
        1 cggcgtcgcc ggagaattcc ggatccggac ccgcccgctt cggcaggaag ttcattccgt
       61 gcctgcgccg gctgactatg cgcgaggcga gctgggtccc gctgtcacgg acggagacct
      121 gggcacatac ttccgatctc acttcggcgg gcagcttatc gtcggaagcg cggagccaga
      181 atgcgacgct cttcactgga tagatgaccc ggatgatttc gaggcccagc ccaccgcgca
      241 ggcgtgggat tcgcaggtac tccgcctggc ccgaagaatc ccgtcgctgg gcatcccgcc
      301 ccgtcccgtt ggtttcgccg cactctacga cgttgccgac gactggatcc cggtctacga
      361 ccggacctca ttggccgggt tctatgtggc cattggcacg agctgcaacc agttcaaaaa
      421 cgctcctgtc gccggccgct ttatggcggc cctggtacac gcttgcgaaa acggacacga
      481 tcacgactcg gatccggttc tgtttagcgg acccttcacc aagaacgaaa taaacctcgg
      541 gcactactca cgccttcgcc agccccatgc ggagagcgcg aacaatgtga tgggctgata
      601 acacccaggg ttccggcgtg tccgtcagcg agcagcggac cttacggacc tgcatggacc
      661 cgaacgcggg tttgatggtc cggcggatat acccgaggct gggaaccagc aaccggaggg
      721 aaaattcccg gcctggcaaa cgggtcaccg gtgcccggtg aggtaagcgg ggcggccgga
      781 ggggacggcg gtagggagcc gggccggcct ccggctgcgg ccggggctga tctggatcag
      841 tctccaccag gcgatgaagg cgaacacccc cgccagcgca acttgcatgc ccacagcgag
      901 cagccaggca gacggcgtgt gggcccagat cgtttcggta ctgctgtgcg gcggcaggag
      961 ggtcttgagg ttgacagtgg acgcggtccc ggcgaagccc cattgggcgg gggccacgta
     1021 tgagacccat tgcttcggcc ctga
//
LOCUS       DASRPQ010002404         1289 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1221949, whole genome shotgun sequence.
ACCESSION   DASRPQ010002404 DASRPQ010000000
VERSION     DASRPQ010002404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1289
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1221949"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..364
                     /locus_tag="VFD73_27090"
     CDS             <1..364
                     /locus_tag="VFD73_27090"
                     /inference="COORDINATES: protein motif:HMM:NF024914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZI77643.1"
                     /translation="HPPSEHSACYSSSRLILNVTRAPMALPGYCPSGRLFEATACGVP
                     VLSDAWEGLDQFFEVGSEILIANDTADVITALGISEAELARIARAARERVLADHTAAR
                     RATELVAALESALSVGAN"
     gene            364..1113
                     /locus_tag="VFD73_27095"
     CDS             364..1113
                     /locus_tag="VFD73_27095"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HZI77644.1"
                     /translation="MWGIVPAAGIGSRIQPLAFSKELLPVGSRLEGDAERPRAVSEYL
                     VERMVLGGADRICFVIAPGKSDILEYYGNRPHIAHMSFTVQQKPLGLCDAVFQALPLI
                     PRDEFVIVGLPDTIWFPEDALRSLGSDPLSFLLFPVNRPERFDAVLTEPDGQVRQICV
                     KQPNPGSPWIWGAFKLSGQAMRELYELWCKRSRSDEYIGTLVNAYLALGGRAIGVRAG
                     EAYVDVGTLHGYREAIRLLSSRPVSAAGAPA"
     gene            1110..>1289
                     /locus_tag="VFD73_27100"
     CDS             1110..>1289
                     /locus_tag="VFD73_27100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77645.1"
                     /translation="MIEAVKLWNEPNNMSHWDFEIDAGWQVYAEMVKSASAAIRAENS
                     GLTQVLGGISPIDPDF"
BASE COUNT          226 a          384 c          430 g          249 t
ORIGIN      
        1 ccacccgcca tcggaacatt ccgcctgcta tagctcatcg cgactgatcc tcaatgtcac
       61 cagggcaccc atggcgctac cgggctactg tccctcgggg cgcctgttcg aggccaccgc
      121 ctgcggggtg ccggttctga gtgacgcctg ggaaggactg gatcagttct tcgaggtcgg
      181 aagcgaaatt ctgattgcga atgacactgc ggacgtcatt accgcgctgg gtatctcgga
      241 ggcagaactg gcgcggatcg cgcgagcagc gcgggagcgg gtgttggccg accacaccgc
      301 tgcgcgccgg gcgaccgaat tggtcgccgc actggagagc gcgctcagtg tcggagcgaa
      361 ctgatgtggg gcattgtccc agcggcgggg atcggcagcc gcattcaacc gctggcgttc
      421 tccaaggagc ttctgccggt gggcagccgc ctggaaggcg acgcggagcg gccccgtgcg
      481 gtgagcgagt atctggtgga gcgcatggtc cttggtgggg cggaccggat ctgtttcgtg
      541 atcgctcccg ggaagtccga catcctggag tactacggca accggcctca catcgctcat
      601 atgagcttta ccgtccagca aaagcccctg gggttgtgcg atgcggtatt ccaggctctt
      661 ccccttatac cgcgggatga atttgtcatt gtgggtttgc cggacacgat ctggttcccc
      721 gaggacgcgc tgcgcagtct ggggagtgac ccgctctcct tccttctctt tccggtcaat
      781 cggcccgagc gcttcgacgc agtcctgacc gaacccgacg gtcaagtccg ccaaatttgt
      841 gtgaaacagc cgaacccggg ctcaccatgg atctgggggg cgttcaagct ttccgggcaa
      901 gccatgcgcg agctctacga gttgtggtgc aagcgaagcc gaagcgacga gtacatcggc
      961 acgctggtga acgcatacct ggcgctgggt ggccgtgcga tcggggttcg cgccggcgag
     1021 gcgtatgtcg acgtgggaac actgcacggc tatcgcgaag ctatccggct tctgagcagc
     1081 cgcccggtat cggccgcagg agcgccggca tgatcgaggc ggtcaagctc tggaatgagc
     1141 cgaataacat gtctcactgg gacttcgaga tcgacgccgg gtggcaggtg tacgccgaaa
     1201 tggtgaaatc agcgtcggct gcgattcgtg cggaaaactc cgggttgact caggtgctcg
     1261 gagggatctc tcccatcgac cccgacttc
//
LOCUS       DASRPQ010002405         1063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3103832, whole genome shotgun sequence.
ACCESSION   DASRPQ010002405 DASRPQ010000000
VERSION     DASRPQ010002405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3103832"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..858
                     /locus_tag="VFD73_27105"
     CDS             <1..858
                     /locus_tag="VFD73_27105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HZI77646.1"
                     /translation="TCFTRFMQRFAESLRGVVAVDGKTLRRSFDRATGKSPLHMVHAW
                     SAEQRLLLGQVAVDGKSNEITAVPKLLELLSLKGCIVTADALNCQRVIATQVVAQGGD
                     YVLALKGNQGSLHDDVRCFFGDPTCTAELAHITVDGDHGRIETRTSLVSTDIAWLQER
                     HAWPGLAAIGRVLRTREVSAKVSTETAYYLLSTPLSAEHFGGVARAHWGVENGLHWVL
                     DVTMNEDQARTRKDHGPQNIALLRRLALNLARLEGSEGSMKGKRMRAAWDDTFLTRLL
                     AQFGKTHMR"
BASE COUNT          187 a          361 c          327 g          188 t
ORIGIN      
        1 acctgcttta cccgcttcat gcagcgtttc gctgagagcc tgcgaggcgt ggtggccgtc
       61 gatggcaaga cgctgcggcg ctcgtttgat cgtgccacgg gcaagtcgcc gctgcatatg
      121 gtccatgcct ggtccgcgga gcagcgcctg ttgctcggtc aggtggcggt cgacggcaag
      181 tccaacgaga tcacagcggt gccgaagctg ctggaactcc tgtcgctgaa gggctgcatc
      241 gtcaccgccg acgcactcaa ctgtcagcgg gtcatcgcca cccaggtggt cgcacagggc
      301 ggggactatg tgctcgcgct gaaaggtaac cagggcagcc tgcacgacga tgtccgctgt
      361 ttcttcggcg accccacctg caccgccgag cttgcccata tcaccgtcga tggcgatcac
      421 ggccgcatcg agacccgcac cagtctggtc tcgaccgata tcgcttggct gcaagagcga
      481 catgcctggc cgggtctggc ggccattggc cgcgtgctcc gcacccgtga ggtcagcgcc
      541 aaggtcagta ccgaaaccgc ctactacctg ctgagcaccc cgctcagcgc cgagcatttt
      601 ggtggggtgg cccgcgccca ttggggggtg gagaacggcc tgcactgggt tctcgatgtg
      661 accatgaacg aagaccaagc cagaacccgc aaggaccacg ggccgcagaa catcgccctg
      721 ctgcggcgcc tggctctcaa ccttgccagg ctcgaaggct ccgaggggtc catgaaaggc
      781 aagcgcatgc gcgccgcatg ggacgacacc ttcctaaccc gcctcctcgc ccagttcggc
      841 aaaacccata tgcgatagcc ctgggggttc ggtgccctca gcactgccgg cctcacgaac
      901 aatctgggcg gcgatcagca gtccatcggg ctgatgttca acctgctcta cgatttccaa
      961 atcccgggtg ccccctgggt tgtgccctat gtcggcgccg gcattggcat ggcctggacc
     1021 cagtggagtg ccacccagag ccgatccatc cccgccaacc tcg
//
LOCUS       DASRPQ010002406         1021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4682597, whole genome shotgun sequence.
ACCESSION   DASRPQ010002406 DASRPQ010000000
VERSION     DASRPQ010002406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4682597"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..612)
                     /locus_tag="VFD73_27110"
     CDS             complement(37..612)
                     /locus_tag="VFD73_27110"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HZI77647.1"
                     /translation="MSNLTPEQEQAQIQVLDTKRVYDGKLFKVDVEDVRLPSGRTSKR
                     EIVRHPGAVALMVIDPDGQLLLVRQYRRATDQVLLEIPAGTREPNEDAEACARREVQE
                     ETGFAAGTVEHLGGFYSAPGFCTEYLECYLCTDLRPGDLHPEEDEDLQLERLSLDEAW
                     AAAADGRISDAKTLAGLLLYAARHPEARPRA"
     gene            complement(686..757)
                     /locus_tag="VFD73_27115"
     tRNA            complement(686..757)
                     /locus_tag="VFD73_27115"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(723..725),aa:Cys,seq:gca)
BASE COUNT          166 a          310 c          353 g          192 t
ORIGIN      
        1 gacggaggaa caggcgcgga gatgtggccg gcaaactcag gcgcggggcc gggcttcggg
       61 gtggcgggca gcgtaaagca gcaggcccgc cagcgtcttg gcgtcgctga tcctgccgtc
      121 cgccgcggcg gcccaggctt catcgaggct caggcgctcc aactggaggt cttcgtcctc
      181 ctccgggtgg aggtcgccgg ggcgcaggtc ggtgcagaga tagcattcca ggtactcggt
      241 gcagaagccg ggcgcggagt agaagccgcc caggtgctcg acggtacccg cggcgaagcc
      301 cgtttcctcc tgcacttcgc ggcgcgcgca ggcttcggca tcttcgttgg gttcgcgggt
      361 gcccgccggg atctccagca gcacctggtc ggtggcgcgg cgatactgac gcaccagcag
      421 caactggccg tccgggtcga tcaccatgag cgcgacggcg ccggggtggc gcacaatctc
      481 gcgcttgctg gtgcggccac tgggcagccg cacatcctcc acgtccacct tgaagagctt
      541 gccgtcgtag acgcgcttgg tgtcgaggac ctggatctgg gcctgttctt gttcgggcgt
      601 gaggttgctc atgcgggtct cctgtgtggg tgctgccaat acgaaaggca ctaccggggg
      661 gcagtgcctt cagaggtcaa acgggaggcg acgagcggat tcgaaccgct gcatggaggt
      721 tttgcagacc tctgccttac cacttggcta cgtcgccgta tcgctgtatg ccggactaat
      781 ataccagatt ggcccgcccc tgtcaaccac ggacgagtgc tgagtgctga gtacgaggag
      841 tgattcggtg atcgggtggt tagtgtgaca agtagagaag agtgcccgcg caccgcatgg
      901 ctgaccactt gcctccactc agcactcagc actcagcact tgccaagatg cggcccagat
      961 cgatgatcgc gttttcgtag gtgccctcgg cgatcacttt gtcgccgctg gtgacgcggc
     1021 a
//
LOCUS       DASRPQ010002407         2111 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2474132, whole genome shotgun sequence.
ACCESSION   DASRPQ010002407 DASRPQ010000000
VERSION     DASRPQ010002407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2111
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2474132"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..469)
                     /locus_tag="VFD73_27120"
     CDS             complement(<1..469)
                     /locus_tag="VFD73_27120"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HZI77648.1"
                     /translation="MRSKIVASSSVSELSRPLGQEPTLSVVAPLFNESQNVRPLVEWI
                     RQALESYEGSYEVILVDDGSRDDTWAQVCAVAGPQVRGLRLGRNVGQTAAMMAGFDHA
                     LGRVVVSLDGDLQNDPRDIPGLIAKLEEGYDLVCGWRRQRQDKLLLRKVPSWVA"
     gene            complement(692..1456)
                     /locus_tag="VFD73_27125"
     CDS             complement(692..1456)
                     /locus_tag="VFD73_27125"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HZI77649.1"
                     /translation="MPGIRSSNPSIPAVTGIETPLARPYYRDWSQAGLSAAASTSAAA
                     LRRSLNFFVALIAVVALLPVMLLIAMLVWLTSPGPVLYTQVRVGLDRRDLARRASQNH
                     RRERNLGGQPFTIYKFRTMRVDAEHQSGAVWAQQRDPRVTPIGRLLRQYRLDELPQLF
                     NVLRGDMNIVGPRPERPTIFAELREHIAEYPLRQRAKPGITGLAQINHHYDRSLEDVR
                     TKVHYDLEYIRRQSVGEDVRIMLKTVPVILLRRGGW"
BASE COUNT          433 a          640 c          656 g          382 t
ORIGIN      
        1 tggccaccca ggagggaact ttccgcagca gcaatttgtc ctgccgttgc cggcgccagc
       61 cgcagaccag atcgtagcct tcttccagct tggcgatcag gcccgggata tcccggggat
      121 cgttctgcag gtcgccgtcc aaggaaacca ccactcgccc gagggcatga tcgaaacccg
      181 ccatcatcgc tgccgtctgc cctacgtttc ggccgagccg gagaccacgc acctgaggac
      241 cagctacggc gcacacttgc gcccaggtat catcccggct gccatcgtcc accaggatga
      301 cctcgtaaga accctcatag ctctcaagcg cttgccggat ccactccacc agcggccgaa
      361 cattctgcga ctcattgaag aggggtgcca ccactgaaag ggtgggctcc tgacccaatg
      421 gcctgctgag ctcggaaacg gaggatgacg ccacgatctt ggatctcact cctggaattg
      481 ggcaatggcg aaagctaggg gtccagctac ccacatgcca gcaatcgttg ttccgcccgc
      541 ctgggatctg agggcaaaca ctaagttgtt tggctggaag gtgtagcagg ggaaatctga
      601 ggagggcgtg acccaggcag cgcactgggc ggcggcactg tggcccgagc gcaacgcgcc
      661 gggccggacg cataccctgc ggcggccgac tctaccagcc tcctctgcgc agaaggatca
      721 ccggaaccgt tttgagcatg atgcggacat cctcccccac cgattgccgg cggatgtact
      781 ccaggtcgta gtggaccttg gtccggacgt cttccagcga gcggtcgtag tggtggttga
      841 tctgcgccaa gccggtaatc ccgggcttgg cccgctgccg cagcggatac tcggcaatgt
      901 gctcgcgcaa ctcggcaaag atggtgggcc gctcgggccg gggccccacg atgttcatgt
      961 cgccccggag cacgttgaag agctggggca gttcatccag ccggtactgg cgcaggagtc
     1021 ggccgatcgg ggtgacgcgg ggatcgcgct gctgagccca caccgcgccg ctctgatgct
     1081 cggcatcgac ccgcatcgtg cggaacttgt agatggtgaa aggctgtccc cccaaattcc
     1141 gttcgcgtcg atggttctgc gacgctctcc tcgcgagatc gcgccgatcg agcccaaccc
     1201 gcacctgggt gtacaacacc ggcccgggag aggtgagcca gacgagcatg gcgatcaata
     1261 acatcacggg caggagagca actaccgcaa ttagcgcgac gaagaaattg agggagcgcc
     1321 gcagtgccgc cgcgctggtg gaagcggcag cgctgagtcc ggcctgactc caatctcggt
     1381 agtacggacg cgcgagtgga gtctcaatcc ccgtgactgc ggggatcgag ggattgctac
     1441 tgcgaatacc gggcatcgca attcccattg gagcgctcag tcacattgga aggacgaatg
     1501 aggatattgc cggccaccga cacccttctt ctgttcgagc gctcagattc agacatcgaa
     1561 tcaggttcct acggaagtag cttaatacgc gcccgatggt atccctgtga tcccactcac
     1621 gaagtgatat aactaacgat cgcaggctca gttctgggac cgacgcttgg ctggaggtcg
     1681 agcgtcggtc aggagcgggt cgggcgcctc acccaaaccg aagcttgcca gcctttgact
     1741 gaactccgaa agctctcctg cagctgacgg agtgccggac cctgggacat cgtcggcggc
     1801 ttcctcagca ggaggaagtt ctgggagcgg ctcgataggc atgttcgtgt ataaccatcc
     1861 gaaaatggtt cggctgaact tcgggggcgg gtcggtctgt ttcaaggatg gagccgaaaa
     1921 atttcgcatt gtccccgggc ctggatcaac cgacacctag ccccctaagc ggatagcact
     1981 gaatgtgttg agagatcgaa tcggagcgga ccgagtcggc aggaatgagt aagggcgttg
     2041 ctcgggaacc acagcgacca cggctaaatt gccacaatct gcacggtgtc aagaggcgtg
     2101 gcatctcagc a
//
LOCUS       DASRPQ010002408         1361 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4354140, whole genome shotgun sequence.
ACCESSION   DASRPQ010002408 DASRPQ010000000
VERSION     DASRPQ010002408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1361
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4354140"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..559)
                     /locus_tag="VFD73_27130"
     CDS             complement(<1..559)
                     /locus_tag="VFD73_27130"
                     /inference="COORDINATES: protein motif:HMM:NF033394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HZI77650.1"
                     /translation="MAAPNPNYTEILTTSIEARSEALADNVMDNNAVLTWMKQKGKIR
                     TFSGGNKIIEELAYGENDNFMFYSGTDTLDVSASETITAAEFNIKQCAVAVLISGLEE
                     MQNAGKAKMIELLSSRLQIAETTMANRLSLALYADGTGYGGKEITGLGAAVVADPTTG
                     TYGNINGATYSWWRNQYTGNLGAQSS"
     gene            complement(793..>1361)
                     /locus_tag="VFD73_27135"
     CDS             complement(793..>1361)
                     /locus_tag="VFD73_27135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77651.1"
                     /translation="FDAQGGQQPGAQAQAQSQAQASGDPRLEQALARLEAMEQRDRQR
                     AAYEQQRVLGTAQQETQQFIESGEADLIDEPTGRMVETQEGPQEETVRDVMADLMIFN
                     ARRGVTMTMAQAYRAAVQLHPDLAQAMAQREAAKQAQASQATVARAQRASSSVQSRPG
                     VANGGAKKPQSMTDFVEWAYNQATNNSR"
BASE COUNT          180 a          462 c          432 g          287 t
ORIGIN      
        1 cgctgctctg ggcgcccagg ttgccggtgt actggttcct ccaccacgag taggtagccc
       61 cgttgatgtt gccgtaggtc ccggtggtgg ggtcggccac cacggcggcg ccgaggccgg
      121 taatctcctt gccgccgtat ccggtaccgt ccgcatacag ggccaggctc agccggttgg
      181 ccatggtcgt ctcggcgatc tgaaggcgag aactgagcaa ctcgatcatc ttcgccttgc
      241 ccgcattctg catctcctcg agcccggaga tgagcacggc cacggcgcac tgcttgatgt
      301 tgaactcggc ggcggtgatg gtttcggacg cggacacgtc gagggtgtcg gtcccggagt
      361 agaacatgaa attgtcgttc tcgccgtagg ccagttcctc gatgatcttg ttgcccccgg
      421 agaaggtccg aatcttcccc ttctgcttca tccaggtgag gaccgcgttg ttgtccatca
      481 cgttgtcggc gagtgcctcg gaacgggcct caatcgacgt ggtgagaatc tcggtgtaat
      541 tggggttcgg tgcagccatt gtggaaagtc cctcgacgcg ggcatacgca tgcccggaga
      601 tgtcgttcgt ctccaggctt ctgcgcgtgg acggcccttc gccgttcgct cacgccccgc
      661 cagagaccaa ggggccttcc cgggagtggg cctccaaggc tctcccagtg ctgcggtcct
      721 tctctacaac agcgcgggcg gtgggcctgg ttgggctccc ccgcgctgca aatcctagcc
      781 taacacggca cctcaccggc tgttgttggt ggcctggttg tacgcccact ccacgaaatc
      841 ggtcatgctc tgcggcttct tggccccgcc gttcgccact ccgggccggc tctggacgct
      901 cgaggaggcc cgctgcgccc gggcaaccgt ggcctggctc gcctgcgcct gcttcgccgc
      961 ctcacgttgg gccatggcct gggcgagatc cggatgcagt tgaacggccg cccggtatgc
     1021 ctgggccatg gtcatggtga cgccgcgtcg ggcgttgaag atcatcaggt ctgccatgac
     1081 atcgcgaacc gtctcctcct gcggcccttc ctgcgtctcg accattcgcc cggtgggctc
     1141 gtcgatgagg tccgcctctc cactctcgat gaactgctgc gtctcttgct gcgccgtgcc
     1201 gagcacccgc tgttgctcgt acgccgcccg ctgccggtcc cgctgctcca tggcttccag
     1261 acgcgcgagg gcctgctcca gcctcggatc gccggaagcc tgggcctggc tctgcgcctg
     1321 agcctgtgct ccaggctgct ggccgccctg agcatcgaac g
//
LOCUS       DASRPQ010002409         1022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3758579, whole genome shotgun sequence.
ACCESSION   DASRPQ010002409 DASRPQ010000000
VERSION     DASRPQ010002409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3758579"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..551)
                     /locus_tag="VFD73_27140"
     CDS             complement(78..551)
                     /locus_tag="VFD73_27140"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HZI77652.1"
                     /translation="MNVDALDAKIVRFFTDAPRASVLEASRVLKIARATVQARLDRMT
                     DKGVIGSWVPQPDPARFGFPVVAFCSLTINQDLGHDAVVAALTAIPELTEIHTVSGSS
                     DLMARIAARSNPDLQRVLDAMIATRTVLRSSSVIVLNTHFEGRTLPLLEAAARPQ"
     gene            complement(635..>1022)
                     /locus_tag="VFD73_27145"
     CDS             complement(635..>1022)
                     /locus_tag="VFD73_27145"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HZI77653.1"
                     /translation="ETAVREITSGVMVVFNDAAYGAEIHQYAVRGLDDTAMQIEEVDF
                     SAVARAMGAQGTKMRSLADVAALRQWLAAGARGLFVLDVAISQSVVADYMRESMEPVL
                     AADRARADASQSCQEAVLTGAAAASA"
BASE COUNT          189 a          341 c          318 g          174 t
ORIGIN      
        1 gccggagtag ttatagtcat attgactaga actgattcta cgccgacgcc gccggagcac
       61 caaatagtga cgggtcgcta ctgcgggcgg gccgcagcct ccagcagcgg cagcgtccgc
      121 ccttcgaagt gggtgttgag cacgatcacc gacgaggagc gcagcacggt ccgcgtggcg
      181 atcatggcat ccaggacccg ctgcaggtcc gggttggagc gggccgcgat gcgcgccatg
      241 aggtccgagc tgccggagac cgtatggatc tccgtcagct cggggatggc agtgagcgca
      301 gccaccacgg cgtcatgccc caggtcctgg ttgatggtca gcgagcagaa ggccacgacc
      361 ggaaaaccga accgggcagg atccggctgg ggcacccacg aaccgatcac gcctttgtcc
      421 gtcatgcggt ccagcctggc ctggaccgtt gcccgggcga tcttgagcac ccgcgaggcc
      481 tccagcacag aggcccgcgg cgcgtccgtg aagaatcgga caattttcgc gtccagtgcg
      541 tccacattca tggcgtgctc ccgcttcttc cggatccggc agcacaaact gctgccatca
      601 gtgccaattc cttaagcaaa ctggcaccat gatctcatgc cgaagcggcg gcggcccccg
      661 tgagcactgc ctcctggcag ctctgggagg catcggcgcg ggcccggtcg gcggcaagga
      721 caggttccat gctttcccgc atgtagtccg ccaccacact ctgcgagatc gccacatcaa
      781 ggacaaaaag gccccgggcg cccgcagcca gccattgccg cagggctgca acgtctgcca
      841 gggagcgcat ctttgttccc tgcgctccca tcgccctggc aaccgcactg aaatccactt
      901 cctcgatctg catggccgta tcgtcgaggc cgcgtaccgc gtactggtgg atctctgcac
      961 cataggcggc atcgttgaag accaccatga cgccgctggt gatttcgcgg acggcggttt
     1021 ca
//
LOCUS       DASRPQ010002410         1094 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4354382, whole genome shotgun sequence.
ACCESSION   DASRPQ010002410 DASRPQ010000000
VERSION     DASRPQ010002410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4354382"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            518..>1094
                     /locus_tag="VFD73_27150"
     CDS             518..>1094
                     /locus_tag="VFD73_27150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77654.1"
                     /translation="MSLLAAFVVVAGLATFVAIYFIGGASAMPTVHYAASGGQVNVVL
                     QEDPQNDSASKPDWVSYYVQDPATQKWVHTTLFSVPANARVNVTLYGYDGCTPLRNNY
                     FSQVQGTIGNTVTFSQFDQHGKEYLTDKTTQVINAWSDCNVGHTFAIPGIGLYVPVAS
                     PNAELSANNLCSASPCTPSGNPYAKETFSFIS"
BASE COUNT          199 a          361 c          345 g          189 t
ORIGIN      
        1 cgctgggcgg tggacgggtg gtgcgggatg gcggccagcg tcagcccggc cacgagcacc
       61 aggccgcccg cgagcatcca ccgcggggtg cgcagcgccg gccacccgga agcccgggcg
      121 gagatccgcc gcgcgcctcc cggccctggc atcgtcatcg tccctcctgg atccggcgcc
      181 atcctacggc tggccttccc ctagaccccc tcatcacaaa cgattgctgg gaggtgtccg
      241 ggattgcgac gctatcagcc tggtggccgg cagacctcct gtaagccctg gtcaggacgt
      301 ttcggcggca gggaggaggc ggccgcataa tgacaatttc gtcatgcgcg ggctgaggtg
      361 ttgcctcgcg gctcagatgc gaaggagtat ctaccccaga ggtaccggcc tgcacctgtc
      421 ggcacggctg gatatgcatg tgcgttacga cctaaacgcg tgcgaaagtc cggttgagaa
      481 acgaggtggt gatccggtgt ccgtgacagc cagggcggtg tcgctgctcg ccgcgttcgt
      541 ggtagtggcc gggctggcga ccttcgttgc catttatttc atcggcggcg ccagtgccat
      601 gcccaccgtg cactacgcgg cctccggtgg ccaggtcaac gtggtacttc aggaagaccc
      661 gcagaacgac tcggcgagca agcccgactg ggtcagctat tacgtccagg acccggcgac
      721 ccagaaatgg gtccacacca cattgttttc cgtgccagcc aatgcgaggg tcaacgtgac
      781 cctttacggt tacgacggat gcacgccgct gcggaacaat tacttcagcc aggtgcaggg
      841 cacgataggc aataccgtca ccttctccca gttcgaccag cacggtaagg aatacctgac
      901 cgataagacg acccaggtca tcaacgcctg gtccgactgc aacgtggggc acacgtttgc
      961 aatccccggc atcggcctgt acgtgccggt cgcctcgccg aacgccgagc tctcggcgaa
     1021 caacctgtgc agtgcttcgc cgtgcacgcc cagcggcaac ccgtacgcca aggagacgtt
     1081 cagcttcatc agcc
//
LOCUS       DASRPQ010002411         1605 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3104849, whole genome shotgun sequence.
ACCESSION   DASRPQ010002411 DASRPQ010000000
VERSION     DASRPQ010002411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3104849"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..262
                     /locus_tag="VFD73_27155"
     CDS             <1..262
                     /locus_tag="VFD73_27155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77655.1"
                     /translation="RNVPYPGVFGVFLYRSASPNTLRRLADFFPVPAAELTREFESGM
                     SPEEICAKSVRVLREVGADKVYLSNLGFQQVESRYRAIVELL"
     gene            complement(217..>1605)
                     /locus_tag="VFD73_27160"
     CDS             complement(217..>1605)
                     /locus_tag="VFD73_27160"
                     /EC_number="1.5.1.20"
                     /EC_number="2.1.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF006396.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional homocysteine
                     S-methyltransferase/methylenetetrahydrofolate reductase"
                     /protein_id="HZI77656.1"
                     /translation="PVLAQMTVSQDGTTSYGTEVETIASRLTELGADVIGLNCSVGPA
                     AMLDAIERMVERTDRPVSAQPNAGLPRAVDDRRIYLASPEYMGSYARRLIQAGVRFVG
                     GCCGTTPDHIRKIHDYVASLQPRIVPIEASIERSDPKELERPSIPLEDRSSFGAKLAR
                     GERITTVELPPPRGWDPADMIQQCRLLRGAGVDAVNVIDSARPQARMGVIPAALIVQR
                     EVDIETVFHYTCRDRNMLGMLSDLLGAAAAGLRNVLIVTGDPPTLGPYPDSTAVFDID
                     SIGLTNVLNRLNQGLDPGGNSIGQPTRYVIGVALNQGAEPKRELERFAWKVDAGADFA
                     VTQPVFDPAQLASFLSHAQPRIPVVAGIWPLTSFRNAEFLANEVPGVHVPAAIIERMR
                     KAQELGATAARAEGVEIAAEMIEAVQGLVQGIQISAAGGRVDSTLQVLERIRKSGVHN
                     SSTIARYLDSTC"
BASE COUNT          284 a          518 c          498 g          305 t
ORIGIN      
        1 aagaaacgtg ccctaccctg gcgtatttgg ggttttcctg taccgaagcg ccagcccgaa
       61 caccctgcgc cggctggcgg atttcttccc ggttcccgca gcggagctca cccgtgagtt
      121 tgaatccggc atgagtccag aggagatttg tgctaaatcg gtgcgggtac tacgggaggt
      181 gggtgccgac aaggtgtacc tcagcaacct cggttttcag caggtcgaat cgagataccg
      241 agctattgtc gagctgttgt gaacgccgct ctttctgatt cgctcgagaa cctgcaacgt
      301 tgagtcgacc cgtccgccgg ctgcgctgat ctggattccc tgcaccagtc cctgcaccgc
      361 ctcgatcatc tcggccgcaa tctcgactcc ttcggcgcgg gctgctgtag caccaagctc
      421 ctgcgccttc ctcatccgct cgatgatcgc cgcgggcacg tggacgccag gcacctcatt
      481 ggccagaaat tcggcgttcc ggaacgacgt gagaggccag atccccgcaa caacgggtat
      541 ccgcggttgg gcatggctca ggaacgaagc cagctgagcc gggtcgaaga ccggctgggt
      601 aacagcaaaa tcggcaccgg catcgacttt ccaggcgaat cgctccaact cgcgttttgg
      661 ctcagccccc tgattcagcg ccacaccgat gacatagcgg gtcggctggc cgatggagtt
      721 ccccccgggg tcgagtccct ggttcagccg gttgaggacg ttggtcagac cgatgctgtc
      781 gatgtcgaat actgctgtcg aatcggggta cggaccgagg gtcggagggt ctccggtcac
      841 gatcagcacg tttcgaagcc ccgccgcggc agcacccagc aaatcactca gcatgccgag
      901 catgttgcga tcgcggcagg tgtagtggaa caccgtttcg atgtccacct cgcgttgaac
      961 gatgagtgcc gccgggatca ctcccatccg cgcctgcggg cgagcactgt cgatgacgtt
     1021 gacggcgtcg acccccgcgc ctcgaagaag gcggcactgc tgaatcatgt cggccggatc
     1081 ccacccgcgg ggcggcggca gctccaccgt ggtaatccgc tctccccgag caagcttggc
     1141 gccgaatgag gaccggtcct cgagcgggat ggacggcctt tcaagctcct tcggatcaga
     1201 gcgctcgatc gatgcttcga tcggcacgat ccgaggctgc aggctcgcca cgtagtcgtg
     1261 gatcttgcga atatgatccg gcgttgttcc gcagcagccg ccgacgaaac gcacgcccgc
     1321 ctggatcaac cgccgggcgt aggagcccat gtactccgga ctggccaggt aaatgcgccg
     1381 gtcgtccact gcgcggggca gtcctgcatt gggctgagcc gagactgggc gatcggttcg
     1441 ttccaccatc cgttcgatgg cgtccagcat ggcggcgggg ccaaccgagc aattgagccc
     1501 gataacgtcg gccccgagct cggtcagccg gctggcgatc gtctccacct cggtgccgta
     1561 actcgtggtt ccatcctggc tcaccgtcat ctgcgcgagc accgg
//
LOCUS       DASRPQ010002412         1003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4354679, whole genome shotgun sequence.
ACCESSION   DASRPQ010002412 DASRPQ010000000
VERSION     DASRPQ010002412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4354679"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..557
                     /locus_tag="VFD73_27165"
     CDS             <1..557
                     /locus_tag="VFD73_27165"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI77657.1"
                     /translation="RLGAREAKKIDVRVLAATGRAMEQAVERGEFRSDLYYRLNVVRL
                     HIPPLRERPEDIPELLAHFARQIAQRLGHPVSVTPAALVALTHHTWPGNVRELRNALE
                     RAAVLSAGGLLDSKDFALANSGANAATGANTVLDLKTQVEAVERAAIQRALEASNGNR
                     RQAANLLGISLRTLFYKLRRLPAA"
     gene            782..>1003
                     /locus_tag="VFD73_27170"
     CDS             782..>1003
                     /locus_tag="VFD73_27170"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HZI77658.1"
                     /translation="MKRSTSGLTLTEVLIAVAVLAIGLLAVTGSSAMVTRMIGRGKVE
                     TEAALHAARRMELLRAAAASTAPRCLATGF"
BASE COUNT          180 a          334 c          312 g          177 t
ORIGIN      
        1 gccggctcgg cgcgcgggaa gccaagaaga tcgatgtccg cgtccttgcg gccaccggtc
       61 gcgcaatgga gcaggcggtt gaacgcggcg agttccggtc cgatctgtat taccggctca
      121 atgtcgtgcg gctccacatt ccgccgctcc gcgagcggcc tgaggacatt ccggagctgc
      181 tggcccactt cgcgcgccag atcgcgcagc gcttgggaca tccggtcagc gtcaccccgg
      241 ccgcactggt cgccctgact caccacacct ggccggggaa cgtgcgcgag ctgcgcaacg
      301 cactcgagcg tgccgcggtg ctttcggctg gtgggctcct ggactccaaa gattttgccc
      361 tggccaacag tggtgccaac gccgcaaccg gcgccaacac ggttctggat ctcaagactc
      421 aggtcgaggc agtcgagcgg gcagctatcc agcgggcgct cgaggcctcc aacggcaatc
      481 gcaggcaagc cgccaatctc ctcggcatca gccttcggac gctgttctac aaactacggc
      541 gactaccggc ggcctaagcg ctcccgctgc ggccagcaac cagcaatggg ctactccggt
      601 cagagtagcc cattctgaca ttgggccgag ggcgacgcac gtcccttcgg gaagactcgc
      661 ccattgattg ggccataacc acgccggttc cggtagacac gcccatgcat gcatcaatcg
      721 ggtaccacgc acgggccggt tgagaatcag ttttcaggct tccgagcaga aggaggtcct
      781 ggtgaaacgc tcgacatctg gcctcacact gaccgaggtg ctgatcgccg ttgccgtcct
      841 cgccatcggt cttctggctg ttactggctc gtcggcaatg gtcacccgca tgattggccg
      901 aggcaaagta gagacagagg cagcactgca tgcggcccgc cggatggagc tgcttcgtgc
      961 agcagcagct agcacggctc cgcgatgttt ggccaccggt ttc
//
LOCUS       DASRPQ010002413         2924 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4050416, whole genome shotgun sequence.
ACCESSION   DASRPQ010002413 DASRPQ010000000
VERSION     DASRPQ010002413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2924
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4050416"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..962)
                     /locus_tag="VFD73_27175"
     CDS             complement(114..962)
                     /locus_tag="VFD73_27175"
                     /inference="COORDINATES: protein motif:HMM:NF014234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HZI77659.1"
                     /translation="MRPSSIGVIGLGAIGGSIAWQARLAGVPRVIGYSPRSTETVQAL
                     KASAITEAADSAARLAGQAELVVLAAPPTPTLHLIESLATALPPESLVTDVCSVKAPI
                     VKQALASGLGDRFAGGHPLAGTHETGFPAARPDRFQGCVVYICETGSSRGHLAAAAVA
                     GFWEDVLRASPVMIEAEAHDRQLAWTSHLPQAIAYALAHALSDQGLGGVSFGSGARDT
                     MRLAGSSPELWIDVLRHNAAALSGPLQRTEEALAELRRLLATDDADELRRFLEAARTF
                     RQGIGS"
     gene            1043..1420
                     /locus_tag="VFD73_27180"
     CDS             1043..1420
                     /locus_tag="VFD73_27180"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI77660.1"
                     /translation="MPKILIVEDSPDNMKLFRTLLTLKGYEVTGLTGGEGLREEIERG
                     SPDLVLMDIQLPGKDGFALLREIRSSPFGTVRVIALTAHAMTGDRERALQAGFDGYIT
                     KPIDVRKFPDQVQRALQGERLSG"
     gene            complement(1429..>2924)
                     /gene="glgX"
                     /locus_tag="VFD73_27185"
     CDS             complement(1429..>2924)
                     /gene="glgX"
                     /locus_tag="VFD73_27185"
                     /inference="COORDINATES: protein motif:HMM:TIGR02100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004133 - glycogen debranching enzyme
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HZI77661.1"
                     /translation="PVHHMVTERRLAELGLTNYWGYSSIGFFAPDIRYATKSAERGAQ
                     VTEFKSMVKRLHAVGLEVILDVVYNHTAEGSHLGPTLAFRGIDNATYYRLNPDNPRFY
                     TDFTGCGNTVDLRHARTMQLVMDSLRYWISEMHVDGFRFDLAPVLGRGTSAMDPLGEF
                     FDLVRQDPVVSQCKLIAEPWDLGPDGYQAGRFPIGWAEWNGKYRDTSRRFWRGDPGQL
                     GDLASRLAGSSDLYEPTGRSPLASINFVTCHDGFTLQDLVSYELKHNEANGEQNRDGT
                     DYNLSRNWGVEGPAEAAHIVRMRERIKRNLLATLAFSQGVPMLSHGDELGRTQQGNNN
                     AYCQDNPVSWIDWRLTPLQQELLQFTRTLFSIRAGNPVLRRRTFFRQDAGLPAGKDLV
                     WLRPDGHEMTATEWNDAGNHVLGMLIRGEATDEVDERGRRVTGNAILLLLNGGARSKP
                     FCLPQLGRSGSWSEILTTSHPLPRPVHQDRVNLVAHSLMLLRHDLLS"
BASE COUNT          549 a          921 c          937 g          517 t
ORIGIN      
        1 gagcgaggtg agggcctcgg agatgctact cgtgccccgg gccaacgctg ccagcagaag
       61 aacccggtga gtgatgctct tgtcgcccgg gacgcggctg gttcccgcta ctctcatgat
      121 ccgatcccct ggcgaaacgt ccgcgccgct tccagaaacc gacggagctc gtcggcatcg
      181 tccgtcgcga gcaggcgacg cagctctgcc agtgcctctt cggttcgctg gagcggcccg
      241 ctcaatgcag cggcgttgtg ccgaagaacg tcgatccaga gctcagggct gctccccgcc
      301 aggcgcatcg tatccctggc gccgctccca aaggaaacgc caccgagacc ctgatcggat
      361 agcgcgtggg ccagggcata cgcaatcgct tgaggcaaat ggctggtcca ggccagctgc
      421 cggtcgtggg cttcggcttc gatcatgact ggtgacgccc tcagcacgtc ttcccaaaac
      481 cccgcaaccg ctgccgcagc gaggtgccct ctggagctgc cggtctcgca gatgtagacc
      541 acgcacccct gaaaacgatc cggccgagca gcgggaaagc cggtctcgtg agtgccggcg
      601 agcgggtgtc ctcccgcaaa gcggtcgccc aatcccgagg ccaacgcctg tttcacgatg
      661 ggggccttca cgctgcagac gtcggtgacc aggctttccg gcggaagcgc cgtggcgagt
      721 gactcgatga gatgcaatgt gggagtgggc ggagcggcga gcaccaccag ctcggcctgg
      781 ccggcgagcc tggccgcgct gtcggctgcc tcagtgatcg ccgaggcctt gagcgcctga
      841 accgtttcgg tggatcgggg cgagtagccg ataacacggg ggaccccggc caggcgtgcc
      901 tgccaggcga tcgagccgcc gatggctccg aggccgatca ccccaatcga ggacggacgc
      961 acgccaagtc gctcgctgtt attgccggag gagtggcaag attgtactga tatgacaacg
     1021 gattctcaac ggaactgagt gcgtgccgaa gattctcatc gtcgaagaca gtcccgacaa
     1081 catgaagctg tttcgtacct tgctcacctt gaaggggtac gaagtcaccg gcctgacggg
     1141 aggcgaaggg ttgcgggaag agatcgagcg cggcagtccc gatctcgtgc ttatggatat
     1201 ccagctgccc ggaaaagacg gattcgcgct gctgcgggag atccggagct ccccattcgg
     1261 caccgttcgg gtgatcgcgc tgaccgccca tgccatgacc ggggatcgcg aacgcgcgct
     1321 ccaagccggg ttcgacgggt acatcaccaa gccgatcgac gttcggaagt tccccgatca
     1381 ggtccagcga gcgctgcagg gtgagcggct gagcggctga cgtttggcct agctcagtaa
     1441 atcgtgacgc agcagcatca gggaatgcgc taccagattg acccgatcct gatgcaccgg
     1501 gcgcgggagg gggtgcgagg tggtgagaat ctcggaccag gatccagacc ggcccagctg
     1561 agggagacag aagggcttcg agcgggcacc accgttcagt aagagcagaa tggcattgcc
     1621 ggtcacccga cgaccccgtt catcgacctc gtcggtggcc tcgccccgga tcagcattcc
     1681 gagcacatga ttgccggcgt cattccattc tgttgccgtc atctcatgcc cgtccggacg
     1741 gagccaaact agatcctttc ccgcgggcaa tcccgcgtcc tggcggaaaa aggtccggcg
     1801 cctgaggaca gggttgccgg ctcgaatgct gaacagcgtg cgggtgaact gcagcaactc
     1861 ttgttgcaat ggcgtgagcc gccagtcgat ccagctgacc ggattgtcct gacaataggc
     1921 gttgttgttt ccctgctggg tccgtcccag ctcatcgccg tgggacagca tcggcacgcc
     1981 ctgagaaaac gccagggtgg cgagcaggtt gcgcttgatc cgctcgcgca tgcggacgat
     2041 gtgcgctgcc tcggcgggcc cctcgacgcc ccagttgcgg ctcaggttgt agtcggtccc
     2101 gtcccggttc tgctcgccgt tcgcctcgtt gtgcttgagc tcgtagctga ccaggtcctg
     2161 cagggtaaac ccgtcatggc aggtgacgaa attgatgctc gcgagcgggc tccggccagt
     2221 gggctcgtac agatcactac tgccggcgag tcgggacgcg agatccccca actggcccgg
     2281 atcgccccgc caaaagcgtc gtgaggtatc ccggtacttt ccattccact cagcccatcc
     2341 gatgggaaac cgccccgcct ggtaaccgtc ggggccaaga tcccagggct cggcgatcag
     2401 cttgcattgg gatacgaccg ggtcctgccg gaccaggtcg aagaactcac caagtgggtc
     2461 catggcggag gtcccacggc ccagaactgg agccagatcg aaccggaacc catccacgtg
     2521 catctccgat atccagtagc gcaggctatc catcaccagc tgcatggtgc gggcgtgtcg
     2581 cagatcgacc gtgttgccac agccggtgaa gtcggtatag aagcgtggat tgtccgggtt
     2641 caagcggtaa taggtggcgt tatcgatccc tcgaaaggcg agcgtcggcc cgagatggct
     2701 gccctccgcg gtgtggttgt agaccacatc gagaatcacc tcgaggccta ccgcatggag
     2761 ccgcttcacc atcgatttga attcggtcac ctgcgcaccc cgctcggccg acttcgttgc
     2821 ataccggata tccggagcga aaaatccgat agagctgtag ccccagtagt tggtgagacc
     2881 cagctcagcg agacgccgct ccgttaccat gtgatgcacc ggca
//
LOCUS       DASRPQ010002414         1663 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1563881, whole genome shotgun sequence.
ACCESSION   DASRPQ010002414 DASRPQ010000000
VERSION     DASRPQ010002414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1663
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1563881"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..1597
                     /locus_tag="VFD73_27190"
     CDS             59..1597
                     /locus_tag="VFD73_27190"
                     /inference="COORDINATES: protein motif:HMM:NF025080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI77662.1"
                     /translation="MQAPEQHIITHLMGEQPMVEAHAAIADTFAGRIHVEWDHSAPVT
                     PFGQLPFFIDYLKQAGLFDAWVADCPLSLISPNAPSKRDLLGTVMLSVLAGHRRYAHI
                     TTLRCDAVNPPLLGMRKVVSEDSVRRGLAKIDPAKGRPWLQNHLDYCTTPLLSEPWVL
                     DMDSTVKTLYGHQEGAEVGYNPHKPGRPSHAYHTYMLSSLRLVLRVDVLPGDQYNVAH
                     ATDGLWTLLDHLGPTRRPALLRGDKSWGIERVMARAEQTDLPYLFRLRMTAKVKRSLE
                     RAMRQSDWANAGQSWQGKETSLRLSGWSRHRRIILLRRKLARDLAITDHTNSTQLRLG
                     FAEVGADQAVWEYAALVTSLDSEILTLGQLYRDRADAENGFDELKNQWGWGGFTTQDV
                     TRCRLLAGMVALIYNWWSLFARLADPEHHREAITSRPLLLSAIARRTRHAGQVRLTIS
                     SMHGLRDKARHAYVRIAGFLAELRENAEQLDPLEKWYRILSEALRHFLKGRQLQPPLR
                     LQPG"
BASE COUNT          309 a          527 c          535 g          292 t
ORIGIN      
        1 cctaaatccg gcagttggat gattgcctga acgccccgaa tcggcggaac ctgctgcaat
       61 gcaggcaccg gaacagcaca tcatcactca cctgatgggt gaacaaccca tggttgaggc
      121 tcacgcggcg attgccgaca cctttgccgg ccggatacac gtcgaatggg accattcggc
      181 cccggtcacc ccgttcggac aactgccttt cttcatcgac tacctcaaac aggccggcct
      241 gttcgacgcc tgggtggcgg actgtccgtt gtcactgatc agcccgaacg cgccctccaa
      301 gcgcgacctg cttggcacgg tgatgttgtc tgtgctggcc gggcatcggc gctacgcgca
      361 catcaccacg ttgcgctgtg acgcggtgaa cccgccattg cttggcatgc gcaaggtcgt
      421 cagcgaggat tcggtgcgcc gcggcctggc gaagatcgac ccggccaaag gccggccgtg
      481 gctgcagaac catctggact actgcaccac gccgctgctg agcgagccat gggtgctcga
      541 catggacagc acggtgaaga ccctgtacgg gcatcaggag ggcgccgagg tcggctacaa
      601 tccgcacaag cccggccgtc cctcgcacgc ctatcacacc tacatgctct caagcctgcg
      661 cctggtgctg cgggtcgatg tattgccggg cgatcagtat aacgttgcgc acgcaaccga
      721 tggcctgtgg acgttacttg atcacctggg gccgacacgc cggccggccc tgctgcgcgg
      781 cgacaagtcg tggggcatcg agcgggtgat ggcgcgggct gagcagaccg atctgccata
      841 tctgttccgc ctgcgcatga cggcgaaggt gaaacgatcc ctcgaacgcg cgatgcggca
      901 atcggactgg gcgaatgccg gccagagctg gcagggcaag gaaaccagcc tgcggctgag
      961 cggctggagc cgccaccgcc ggatcattct gctgcgccgc aagctggccc gcgacctggc
     1021 gatcaccgac cacacaaact caacgcaact gcggcttggg ttcgccgagg ttggggcgga
     1081 tcaagcggtc tgggaatatg ccgcgctggt cacctcgctg gacagcgaga tcctcacgct
     1141 ggggcagttg taccgcgatc gcgcggatgc ggaaaacggg tttgacgaac tgaagaacca
     1201 gtggggctgg ggcggcttca cgacgcagga tgtgacgcgc tgtcggttgc tcgccggcat
     1261 ggtggcgctg atctacaact ggtggagcct gttcgcccgc ctggccgatc ccgagcatca
     1321 tcgcgaggcg atcaccagcc ggccgctgtt gctgtcggcc atcgctcggc gaacccgcca
     1381 tgctggacag gtgaggctga ccatcagcag catgcatggc ctgcgcgaca aggcacgcca
     1441 cgcctatgtc cgtatcgctg gcttcctggc tgagttgcgg gaaaatgcgg agcagttgga
     1501 cccgctagaa aaatggtacc gcatcctcag cgaggcgtta cgacacttcc tgaaaggacg
     1561 ccagcttcag ccacccctgc gcctgcaacc ggggtgatca cagccatggg ttgaagatct
     1621 cctcggttcg ttggctgggg tcggtccaac tgccggattt agg
//
LOCUS       DASRPQ010002415         1710 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3105273, whole genome shotgun sequence.
ACCESSION   DASRPQ010002415 DASRPQ010000000
VERSION     DASRPQ010002415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3105273"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            395..667
                     /locus_tag="VFD73_27195"
     CDS             395..667
                     /locus_tag="VFD73_27195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77663.1"
                     /translation="MAEIITFLEVDDVDHWLRSPKRQEILGPLGITGELFTDPANSNR
                     VGMIANVPDMEAFQKAMQSDEVAEAMRFDGVRPETLVILGRASDHL"
     gene            complement(1111..>1710)
                     /locus_tag="VFD73_27200"
     CDS             complement(1111..>1710)
                     /locus_tag="VFD73_27200"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HZI77664.1"
                     /translation="AGSVVGVDSSPAMLALAARRCEGRENVKLHQADVTSLPAEDASF
                     DGAVCVQVLEYVADIPAGLRELYRALRPGGRLVVWDVDWATVSWHSKDPVRMRRVLEA
                     WDEHLIHPSLPRVLAPAMRAAGFEDVRMEPHPFATARFDPDSYGVANIPAIRSFVSGR
                     RGVSGDEAEAWASELNELGDRDEFYFACLQCCFLGRRPS"
BASE COUNT          321 a          566 c          539 g          284 t
ORIGIN      
        1 gcgccgcgca ttgtccgggc tggcccctcc agcctcaagg gcgctccctg cggtcgcgtg
       61 aactcgcttc gctcgccctt gaccctggag cctctgccag cccagcgggc ctggcggcga
      121 gggccaggcc ggaggccagg cccggtaggc gcgcggcgaa cctcacgcct gacacttatc
      181 agcctgccag tcggcaacct actgatccag ggagattgct gcgacgtgtt tcgcgaggac
      241 ggagccgtgg ctgcgcgacc atgattaccc ccgtccggac ccaggtcccg tacgttgaca
      301 ggtggcctcc ggctccgatt gactgcttgt gcagcacggt cgcaggcagt gttgccttcg
      361 gcctcgatcc cgggaccttg gggggtttcg taacatggca gagatcatta ccttcctcga
      421 agtcgacgac gtggaccatt ggcttcgctc acccaagcgg caagagatcc tcgggcccct
      481 gggcatcacg ggcgagcttt tcaccgatcc cgcgaactcc aaccgtgttg ggatgatcgc
      541 gaacgtgccc gacatggaag ccttccagaa ggccatgcag tccgacgagg tggccgaagc
      601 catgaggttt gatggtgtcc gtcccgaaac gctcgtgata ctcggtaggg catccgacca
      661 cctctgaaga tgcgcgacag gttacgcagc ttcaggcgct cctccggagc cgtgagccct
      721 gactccacta ggaggagggc acatcgaggg cacatgagcg ccgaatgtcg cgtgaagcga
      781 cgagaactga cgagagccga aaacccaggc cacggccggt ttgagagcca gaccgcagct
      841 agggatgacc agcgcatgcg gttcgtcaac tactggcgac cacagaccag acatagacca
      901 agtgccgtac cgcgagcgtg cccgttgcgt gcccgacgcc acggtctgag acggtctatg
      961 gcggtcatcc acgggcaaga caggcagccc ttgacctgca aatacagtgg tcggctaggc
     1021 atgacaagcc agttcccaag ctgatagtcc cgacatcctg cggactgcac agcgtgtatg
     1081 tggttctcga tagcgagtgc gctctagtcg tcaagatgga cgtctgccga ggaaacagca
     1141 ctggaggcaa gcgaagtaga actcgtcgcg gtcgcctagc tcgttcagct ctgatgccca
     1201 tgcctcggct tcatccccgc tcacgccccg gcggccagag acgaagctcc tgatcgccgg
     1261 aatgttggcc acgccgtagc tatcggggtc aaagcgcgcg gtggcgaagg gatgaggttc
     1321 catcctgacg tcctcgaagc ctgccgctct catggccgga gccaggaccc gcggcagcga
     1381 tgggtggatc aggtgctcat cccaggcttc gagcacccgc ctcatgcgga ccggatcctt
     1441 cgagtgccag gaaaccgtgg cccagtcgac atcccagaca accaagcggc ctccgggccg
     1501 caacgcccgg tacagctccc tgagaccggc cgggatgtcg gccacgtatt cgagcacctg
     1561 gacgcatacc gcgccatcga agctggcgtc ttccgccggc aacgaggtca cgtccgcctg
     1621 gtggagcttg acgttctccc ggccctcgca ccgccgcgcg gccagggcga gcatggccgg
     1681 gcttgaatcg acgccgacga ccgagccagc
//
LOCUS       DASRPQ010002416         2598 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3759722, whole genome shotgun sequence.
ACCESSION   DASRPQ010002416 DASRPQ010000000
VERSION     DASRPQ010002416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2598
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3759722"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(47..119)
                     /locus_tag="VFD73_27205"
     tRNA            complement(47..119)
                     /locus_tag="VFD73_27205"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(84..86),aa:Lys,seq:ctt)
     gene            complement(123..195)
                     /locus_tag="VFD73_27210"
     tRNA            complement(123..195)
                     /locus_tag="VFD73_27210"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(159..161),aa:Glu,seq:ttc)
     gene            complement(212..284)
                     /locus_tag="VFD73_27215"
     tRNA            complement(212..284)
                     /locus_tag="VFD73_27215"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(248..250),aa:Glu,seq:ctc)
     gene            complement(427..499)
                     /locus_tag="VFD73_27220"
     tRNA            complement(427..499)
                     /locus_tag="VFD73_27220"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(464..466),aa:Trp,seq:cca)
     gene            complement(621..694)
                     /locus_tag="VFD73_27225"
     tRNA            complement(621..694)
                     /locus_tag="VFD73_27225"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(658..660),aa:His,seq:gtg)
     gene            complement(755..1396)
                     /locus_tag="VFD73_27230"
     CDS             complement(755..1396)
                     /locus_tag="VFD73_27230"
                     /inference="COORDINATES: protein motif:HMM:NF013247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HZI77665.1"
                     /translation="MRHTTTLIETIRIRNGTAPLWYLHIRRLATSCKALGVPLPGELP
                     PPEGGSDRVYRLEVGMRGAHASERLVGPSDPVKLIVSRVAHHPYPHKTTDRSQFERAL
                     DIARGAEADDALLLTPGGFVAETAIYSVFWWENGTLCAPALDIGILPGVGRARVIEIA
                     GKVEERRTSWKELRGVSVFLVNSVRGVVKVSAVQDDAVPSSTQTDDLAARFWP"
     gene            complement(1398..2252)
                     /locus_tag="VFD73_27235"
     CDS             complement(1398..2252)
                     /locus_tag="VFD73_27235"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HZI77666.1"
                     /translation="MARLQLLGAAFLFSTGGAAIKAAALTGWQIASFRSGVAAVALWF
                     MTPAARRGWTWQGALVGVAYAGCLTLFVLANRLTTAANTIFLQSTAPLYLLFLGPWLL
                     HEPVRREDVGFMLAVGAGLVLFFVGVDRPLVTAPDPGRGNLLALASGFCWALAVAGLR
                     WLSAEKGRGSPAAAVVSGNLTAFLVSLPMALPLGSHGPGDWAIIGYLGIFQIALAYVF
                     VTNAIHRIPALEASVILLLEPALNPLWAWVVQHEAPGAWALLGGAIILGATTIKSWNE
                     SRVTAPVT"
BASE COUNT          532 a          870 c          792 g          404 t
ORIGIN      
        1 aaaaaagcga cccagaattt ccgggtcgct ctcactcgca tcgatgtgcg ccgcgtagga
       61 atcgaaccta caacctagtg attaagagtc acttgctctg ccaattgagc tagcggcgcc
      121 gatagcccca acgggaatcg aacccgtctt tcgaccttga aagggtcgcg tcctaaaccg
      181 atagacgatg gggccgtttc ccttatcaaa atagcgctaa cgggattcga acccgtgttt
      241 gggccttgag agggccccgt cctagtcccc tagacgatag cgccgtgtcg gtcagtcgtc
      301 agtcgtcagt cctcagtcgt cagttaacga cgaagactaa ccgtgtccac gccttcccga
      361 gtcaagcggt cagacctggg ctccatcagc tgacgactga ggactgaggt ctgacgactg
      421 acgaaacagg cccggcagga ctcgaacctg caacccccgg ttttggagac cggtgctcta
      481 ccacttgagc tacggaccta gtcagtcgtc agtcctcagg cgtcagtcgt cagccttcca
      541 acgaaggacc cgcaggccaa agtgggatcc tttattttta ccgctcctac tgacgactga
      601 tgactgatca acggtcaacg ggtggctgac gggaatcgaa cccgcaacct ccggagccac
      661 agtccggcgc tctaaccgat tgagctacaa ccaccacggc cttcaaatcc acgcaacttc
      721 agaaccggga aatatcgtcc gaaacagggt agggtcaagg ccaaaaacgt gcagcgagat
      781 cgtccgtctg cgtcgacgac ggcaccgcat cgtcctgtac cgcagagact ttgacaacgc
      841 cccgtaccga gttcaccagg aagacggaga ccccgcgcag ctccttccag gaggtccgcc
      901 gctcctccac cttgccggcg atctcgatca cccgggcccg ccctacgccg ggcaaaattc
      961 cgatgtccaa cgccggggcg cagagcgtcc cgttttccca ccagaacacg ctgtaaatcg
     1021 ccgtctccgc gacgaaccct ccgggcgtca gcagcagggc atcgtcggct tcggctccgc
     1081 gagcgatgtc gagcgcccgc tcgaactggg accgatcggt cgtcttgtgc ggatacggat
     1141 gatgcgccac ccgcgacacg atgagcttca ccggatcgga ggggcccacg agccgctcgc
     1201 tcgcgtgcgc cccgcgcatg cctacctcga ggcggtagac cctgtcgctc ccaccttccg
     1261 gcggagggag ctcgcctggc agcggaacgc ccaacgcctt gcagctggtc gccagccggc
     1321 ggatatgcag ataccagagc ggcgcggtgc cgtttcgaat ccgtatcgtt tcgatcaggg
     1381 tcgtcgtgtg gcgcacgtca ggtcaccgga gccgtcaccc ggctctcgtt ccagctcttg
     1441 atggtggtgg cacccaggat gatcgccccg cccaggagcg cccacgctcc gggcgcctca
     1501 tgctggacca cccaggccca cagtggattc agcgccggtt ccagcagcag aattaccgat
     1561 gcctccagcg cgggaatccg gtgaatcgcg ttggtcacga agacatacgc gagggcgatc
     1621 tggaagatgc cgagataacc gatgatcgcc cagtcacccg gaccatggga gccgagcggg
     1681 agcgccattg ggagagatac caggaacgca gtcaggtttc ccgagacgac tgccgccgcg
     1741 ggagagcctc ggcctttttc cgcactgagc cagcggaggc ctgcgacggc aagcgcccag
     1801 cagaagccgc tcgcgagggc gagcaggtta ccgcgccccg gatccggcgc cgtcaccagc
     1861 ggccggtcca cacccacgaa gaagagcacc agccccgcac ccaccgcgag catgaagccg
     1921 acatcttccc gccgcaccgg ctcatggagg agccagggtc ccaggaagag cagatagagc
     1981 ggagccgtgg actggagaaa gatggtgttg gccgcggtgg tgagccggtt ggccagcacg
     2041 aagagcgtga ggcagccggc gtacgccaca ccgaccagtg ctccctgcca ggtccagcct
     2101 cgccgcgccg ccggagtcat gaaccagagt gcgactgcgg caacgccgga gcggaagctc
     2161 gcgatctgcc agccggtcag tgccgcggcc ttgatcgcgg ctcccccggt tgaaaacagg
     2221 aaggcagccc caaggagctg caaccgagcc atggagcggg acgtcatgga gcggaaggta
     2281 agagacgggc ggacgggcgg acaggcggac aggcagtcag gcggccggac ggtcaggcgg
     2341 tcggagggtc ggagggtcgg agggccggac cgtcggaagc gtgctaccct gcacgaagcg
     2401 aacgggcccc agcctcaggg ccacgagccc gcacccggca ccagccctgc cgccgtgagc
     2461 gacaccacat tacgccgggc gagttatccc catatcttga ggggcttcga ctttcgactt
     2521 tcgactcatg actctcgact tacgactctc gagcctccac ccccaaaccc gagcccacca
     2581 tgtccctcct cgaaatgc
//
LOCUS       DASRPQ010002417         1495 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1223896, whole genome shotgun sequence.
ACCESSION   DASRPQ010002417 DASRPQ010000000
VERSION     DASRPQ010002417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1495)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1495)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1495
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1223896"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(537..875)
                     /locus_tag="VFD73_27240"
     CDS             complement(537..875)
                     /locus_tag="VFD73_27240"
                     /inference="COORDINATES: protein motif:HMM:NF023202.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lsr2 family protein"
                     /protein_id="HZI77667.1"
                     /translation="MAQKIQTLFIDDLDGSEAEGTVRFGLDGAEYEIDLNAEHAQALR
                     DALARYVHAARRAGSGARRPARGGRRAPAGGVDSTEVREWAKAQGIDVKDRGRVPAEL
                     VVKFKAATGN"
BASE COUNT          273 a          483 c          456 g          283 t
ORIGIN      
        1 agggtcgctc tcagccatca ggacactaat agtgccctgt ccggagctgc cgcggaagcc
       61 tagccggcga gttggcctct aggccgggtt ctgtcacccc cctttccgta acctgggcgc
      121 actccccgaa atgctggctg acctgtggtt tcacctctca cagcttctca tcagttcctg
      181 tgtcttttca cgctctggcg gaacagggac ggaactggca gatctcgggc cggtctgggc
      241 agatgaagaa gcgcgagctg tcctagagcc ggagccggtg agccagacac aactttcgac
      301 acgctcgcag cagtcgtacc gcgattctgc gggaggaaga ggcaggcttc tacgtccggt
      361 tgcacgagga cgggagcatc acttgggaag ggcacgtcac actcgctcag acggatccgt
      421 caaggagagt tgaggaagcg cgggagcgcc agttggccaa cagcacttgc tctcccgcca
      481 gcggcatcat gtacgtgagg agccaacgcc ccggcgaccg ggtacggccc cggcccctag
      541 tttccggtag cggccttgaa cttgaccacc agctcggcag gaacccgtcc gcggtccttc
      601 acgtcgatcc cctgcgcctt agcccactcg cggacctcgg tgctgtccac accgcccgcc
      661 ggtgcccgac gcccgccgcg ggctggccgt cgcgcaccgc tcccagccct cctggccgcg
      721 tggacgtagc gcgccagcgc atcccgcagc gcctgggcat gctcggcgtt caggtcgatc
      781 tcgtattcgg cgccgtccag accgaagcgg acagtgcctt cagcctcact gccatcgagg
      841 tcatcgatga acagggtctg tatcttctgg gccacaggtt ctccattcct cactagcctc
      901 atcagcccag gccagccgaa ctccacacga ggcacctact tcgatgaatt gtgagcgctc
      961 acaagtctgc ccgaggcaat cgcgccggac aggcgatcat gttccgatta gatcaccatt
     1021 gtccctggtg gtcaggtgcc cctggtggtc agggcgttac cgctgccgtc gaggacccgc
     1081 cgctcgcccg tatccggcta tggtggggag tgttcagggc ccaggccgcc ccatggtgcc
     1141 tacgccgtca cgatctccaa cggcctttgt gatcacacgc gggcgatgcc caggcccata
     1201 gcgaatatcg tacccgcctg cctttgtgac gttcggtacg gagttagcaa ccttcagtcg
     1261 gacagcagtc acgctgtcgc ttgtggtatg accagtatgt ccgaaagtat cgctgaactg
     1321 ggcatcggct gatttacgtg tcgggccaga aagccatcgg tcgcaatagg gcaaggacga
     1381 ggttcgggga ccatggcgag gagtgagcga atatgacaag ggaatatgcc gtgtgctatg
     1441 cgttcggaag gcggcgagcg ccattggcac cattgggccc agaggaaact atcat
//
LOCUS       DASRPQ010002418         1122 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4051106, whole genome shotgun sequence.
ACCESSION   DASRPQ010002418 DASRPQ010000000
VERSION     DASRPQ010002418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4051106"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            13..>1122
                     /gene="glgP"
                     /locus_tag="VFD73_27245"
     CDS             13..>1122
                     /gene="glgP"
                     /locus_tag="VFD73_27245"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HZI77668.1"
                     /translation="MYSGGLGNVAGDQLKAASDLGVPVVAVGLLFQQGYFRQVIDKNG
                     EQQALFPYNDPGQLPITPLRQSNGEWLRLEIALPGYSVWLRAWQVQVGRVKLYLLDSN
                     DAANFAVHRGITGELYGGGPELRLKQELLLGIGGWRLLRALGVQPEVCHLNEGQAAFA
                     VLERARDFMEETGQPFAVALAVTRAGNLFTTHTAVAAGFDRFSPALIEQYLGGYAEKK
                     LGIGRDDLLALGRQNPSDSAESFNMAYLAIRGSGAVNGVSRLHGKVSRRLFLPVFPRW
                     PEDDIPIGHVTNGVHMPTWDSAPADDLWTEACGKDRWLGTTETLGQDIRKVSDAMLWQ
                     FRVVAIKSLVEYARERLSLELAAAGAPAEAVDGASP"
BASE COUNT          205 a          324 c          373 g          220 t
ORIGIN      
        1 gaagctcttc caatctactc gggcggcctt ggcaatgtgg ctggtgatca actcaaagcc
       61 gccagcgatt tgggtgtgcc ggtggtcgct gtgggactgc tattccagca aggctatttc
      121 cgacaggtga tcgacaaaaa cggagagcaa caggctctct tcccgtataa cgatcccgga
      181 cagttgccga tcacgccctt gcgccaatca aacggagagt ggttgcggtt ggagatcgcg
      241 ctgcctggtt actcggtctg gctgcgggcg tggcaggttc aggtcggaag agtgaagctc
      301 taccttctgg acagcaatga cgccgcgaac ttcgctgttc atcggggaat caccggcgag
      361 ctctatggag gcgggccgga gttgcgcctc aagcaggagc tgctcctcgg gatcggcgga
      421 tggcggctgc tccgcgcgct cggggtccaa ccggaggtct gtcacttgaa tgaggggcag
      481 gcggcgtttg ccgtcctgga acgtgcgcgc gacttcatgg aagagaccgg gcagcccttc
      541 gcagtcgcac tggcggtcac acgagcgggc aatctcttca ctacgcacac ggcagtggcc
      601 gccggttttg accgcttctc tcccgccctc atcgagcaat atcttggcgg gtatgccgaa
      661 aagaagctcg gcatcggacg tgacgatttg ctggcccttg gccgccagaa cccgagcgac
      721 tcggcggaga gtttcaacat ggcatatctg gcgattcgcg ggagcggagc ggtgaatggc
      781 gtaagccggt tgcacgggaa ggtgagccgg cgcctctttc tgcctgtgtt tccgcgctgg
      841 ccggaggacg acatacctat aggacacgtg accaacggag tccacatgcc cacctgggac
      901 tcggctcctg ccgacgatct ttggacggag gcctgtggaa aggaccgctg gctgggaacg
      961 accgagacac tggggcagga tattcggaag gtctcggacg ccatgctctg gcaatttcgc
     1021 gtcgtcgcga tcaagtctct tgtggaatac gctcgcgaac gcttgtccct ggaactcgcc
     1081 gccgcaggcg cgccggccga ggctgtggac ggtgcgagcc ct
//
LOCUS       DASRPQ010002419         3542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4051149, whole genome shotgun sequence.
ACCESSION   DASRPQ010002419 DASRPQ010000000
VERSION     DASRPQ010002419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3542
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4051149"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..377)
                     /locus_tag="VFD73_27250"
     CDS             complement(<1..377)
                     /locus_tag="VFD73_27250"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HZI77669.1"
                     /translation="MYLLSVLVLSSFLPGKSAPVLNAEIVADTSCPHRNVPLAGRKSP
                     LDSLSFKMADQTVKVCYGRPSSRGRVMLGGSAVPYGKIWRTRANEPTIFYAPLPLKVA
                     GISIAPGVYSLYTVPGRGEWQIIV"
     gene            complement(380..1522)
                     /locus_tag="VFD73_27255"
     CDS             complement(380..1522)
                     /locus_tag="VFD73_27255"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: protein motif:HMM:NF004679.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HZI77670.1"
                     /translation="MILPGATLGVLGGGQLGRMFTLQARTMGYRVVVLDPDPHSPAGA
                     VADQQIQTAYDDATGLAQLAASCKAITTEFENVPAKTLEQLALSTIVRPPVKAVATAQ
                     DRIAEKTFFQQHGFSTANFRPVRNRAELERAMAEIPLPALLKTSRLGYDGKGQATINT
                     PGDGVSAFEQFGGVACVLEERIDLECELSVIVARGLDGEIVTFPVAENRHHNGILETC
                     VVPARISDKAAAEAEELVRDVARALEYVGVLGVELFVAPGGRLLVNEMAPRPHNSGHY
                     TMDACSADQFEQQLRTLCGLPLARPWLLSPVAMINLLGDLWSAGEPRWEEALRRRGVR
                     LHLYGKSEARPGRKMGHLNCLAADPDRALALALETREALRPISSRS"
     gene            complement(1519..2013)
                     /gene="purE"
                     /locus_tag="VFD73_27260"
     CDS             complement(1519..2013)
                     /gene="purE"
                     /locus_tag="VFD73_27260"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HZI77671.1"
                     /translation="MTQPVVGIVMGSDSDWEVMQHAAQRLLDFQVEHETRVVSAHRTP
                     DLLYRYAEDAAGRGLRCIIAGAGGAAHLPGMLASKTTLPVLGVPVPTRHLQGLDSLLS
                     IVQMPAGVPVATFAIGNAGAGNAALFAIAMLAVGDSELADRLSEFRRTQEQRILNLRL
                     PERS"
     gene            2143..2490
                     /locus_tag="VFD73_27265"
     CDS             2143..2490
                     /locus_tag="VFD73_27265"
                     /inference="COORDINATES: protein motif:HMM:NF024676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HZI77672.1"
                     /translation="MPEPQTGSQVPYISPELTTGERLVRAILDHRVIEFAYQGYRRTV
                     EPYLLGIHEAGEPILLGYQTAGASQSGEIPGWRTFITTAIGDVEVTGTSFAGPRSDFN
                     PFGHSMLEIFARA"
     gene            complement(2499..>3542)
                     /locus_tag="VFD73_27270"
     CDS             complement(2499..>3542)
                     /locus_tag="VFD73_27270"
                     /inference="COORDINATES: protein motif:HMM:NF014895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HZI77673.1"
                     /translation="RVNADTPADAHRGRDFGAEGIGLCRTEHMFFTGDRLMVMRQMIV
                     AQDTAGRQKALDKLLPMQRGDFEAIFRAMEGFPVTIRLLDPPLHEFLPKEPAEIQALA
                     HELEMEPARLQDIVDRLHEVNPMLGLRGCRLGIIYPEITAMQVRAIFEAACTVAARKG
                     RVMPEVMIPLTATVVEFRKQALIVRQVAEQVFQERQITVPYLLGTMIELPRAALTADE
                     LAREAQFFSFGTNDLTQTTWGLSRDDAGRFLPYYLEHGVIEDDPFQVLDQAGVGKLIS
                     MACDLGRRTRPDLKLGICGEHGGDPSAVAFCDRLGMNYVSCSPFRVPIARLAAAQAAL
                     ATRGTMDRTRATV"
BASE COUNT          669 a         1150 c         1113 g          610 t
ORIGIN      
        1 acgatgatct gccattcgcc gcgaccgggt acggtgtaca gcgagtacac gccgggagct
       61 atgcttatcc ccgcgacttt gagcggcaac ggagcataga agatcgtcgg ctcgttggct
      121 cgggtccgcc atatcttccc atagggaacg gcgcttccac ccagcatgac tcgccctctg
      181 gacgaaggcc tgccatagca aaccttcacc gtctgatccg ccattttgaa gctgagcgag
      241 tcgagggggc ttttccgtcc cgccagcgga acattccggt gcggacagga ggtatccgcg
      301 acgatctccg cattcagcac gggggcgctc tttccgggaa gaaagctgct gaggaccaac
      361 acagacagga ggtacatgat tagctcctag aggaaatggg ccggagcgcc tcgcgggttt
      421 ccagtgccag cgcaagcgcc cggtcgggat cggcggcaag acagttgaga tgtcccatct
      481 ttcggcccgg ccgggcttcc gacttgccat acagatgaag ccgcacgccg cgccgtcgca
      541 gcgcctcctc ccagcgtggc tctccggcgg accagaggtc gcccagaaga ttgatcattg
      601 caaccggaga gagcagccac ggcctcgcca gggggagccc gcacagagta cggagctgct
      661 gctcgaactg atcggcggaa caggcatcca tagtgtagtg gccactgttg tgcggccgcg
      721 gcgccatctc attgaccagc agccgaccac ccggggcaac gaagagctcc accccgagca
      781 cgccgacgta ctccagtgct ctggcgacgt ctctcacaag ctcctccgcc tctgccgccg
      841 ccttgtcgga gatacgtgcc ggcacgacgc aggtttccag aatgccgttg tggtggcgat
      901 tctccgccac cggaaaggtg acgatctctc catcgagccc gcgagccaca atcaccgaga
      961 gctcacactc caaatcgatc cgctcctcga gcacgcaggc aacgccgccg aattgctcga
     1021 aggcgctgac gccatcgccc ggagtgttga tcgttgcctg tcccttgcca tcgtacccga
     1081 gacggctggt cttgagcagg gcaggaaggg gaatttcggc cattgcccgt tccagctcgg
     1141 cccgattgcg gaccggccga aagttcgccg tgctgaaacc atgctgctga aaaaaggttt
     1201 tctccgcgat gcggtcctga gcggtcgcga ccgctttcac cggtggacgc acgatggttg
     1261 acagcgccag ctgctcgagt gtcttggccg gaacattttc gaactcggtt gtgatcgctt
     1321 tgcagctggc cgcaagctgt gccagaccag tcgcgtcgtc atatgcggtt tggatctgct
     1381 ggtcggccac agctccggct ggactatggg ggtcggggtc cagcacgacc acccgatatc
     1441 ccatggtgcg ggcctgcagg gtgaacatcc ggcccagctg accaccgccg agaacgccga
     1501 gggtggcgcc aggcagaatc acgagcgctc cggcaacctc aaattgagaa tgcgctgctc
     1561 ctgggtgcgg cggaactccg acagccggtc ggctagctcg gagtcgccca cggccagcat
     1621 ggcgatagca aagagcgccg cattgcctgc tcctgcattg ccaatggcaa aggttgccac
     1681 cggaacgccg gccggcatct gcacgatgga gagcagggaa tcgaggccct gcaggtgccg
     1741 cgtgggcacc ggaaccccga gcaccggcag tgtggtcttg gacgccagca tgcccggaag
     1801 atgggctgcc ccaccggccc cggcgatgat gcagcggaga ccgcggccgg cggcatcttc
     1861 ggcgtaccgg tacaggaggt caggagtgcg atgagccgag acgacgcggg tctcatgctc
     1921 gacctgaaag tccagcagcc gctgagcggc gtgctgcatc acctcccagt cggagtcgct
     1981 gcccatcacg atccccacga cgggctgggt cacggcctcc tcctccggtc tgatagggca
     2041 gggctcgtcg tcacgaggca ggaataaaga atgtgccgca tcctcggtgc aagactggat
     2101 gcggcacggc tagcttgaga ctctctgtct ccgaggtgca caatgccgga accgcaaacc
     2161 ggatcgcagg tgccgtatat ctctcccgag ctcaccactg gtgagcgact ggtgcgggcc
     2221 atcctcgatc accgagtcat cgagttcgca taccagggtt atcgacgcac cgtcgaacct
     2281 tatctcctgg ggattcacga agcgggcgag ccgatcctgc tcggctacca gaccgcgggc
     2341 gcgagtcaga gcggcgagat acctgggtgg cgcaccttca tcacgacggc gatcggtgat
     2401 gtcgaggtga ccggtaccag ctttgccggt cctcgatccg acttcaatcc gttcggacac
     2461 tcgatgctgg agatattcgc gagggcgtag ctcgggcgtc agaccgtcgc ccgagtgcga
     2521 tccatggttc cccgggtggc caatgccgcc tgggccgctg ccagacgcgc gatcggaacc
     2581 cggaacggcg aacacgacac atagttcatc cccagccggt cgcaaaaggc aaccgccgaa
     2641 ggatctccgc catgctcgcc acaaatgccc agcttgaggt ccgggcgggt gcggcgcccc
     2701 aagtcacagg ccatgctgat caacttgccg acgccggcct ggtccagcac ctggaatgga
     2761 tcgtcctcaa tgacaccgtg ctccaggtag tacgggagga agcgcccggc atcgtcccgt
     2821 gagagccccc aagtcgtctg ggtcaggtcg ttcgttccaa acgagaagaa ctgagcttcc
     2881 cgggccagct cgtccgcggt gagggctgcc cggggcagct cgatcatcgt gccgagcaag
     2941 tacgggacgg taatctgccg ctcctgaaac acctgctcgg ccacctggcg cacgatgagc
     3001 gcctgcttgc ggaactcgac caccgtggcg gtgagtggaa tcatgacctc aggcatgacc
     3061 cgccccttcc gggcggcaac ggtgcaggct gcctcgaaga tcgcccgcac ctgcatcgcg
     3121 gtaatctccg gataaatgat gccgagccgg cacccccgga ggcccagcat cgggttcacc
     3181 tcgtggagcc ggtccacgat gtcctgcagc cgcgcgggct ccatttcgag ctcgtgtgcc
     3241 agcgcctgaa tctccgcagg ctccttggga agaaactcgt gcagaggagg gtcgagcaaa
     3301 cgaatggtga cgggaaaccc ctccatggcc cggaagattg cctcgaagtc cccgcgctgc
     3361 atgggaagca acttgtcgag tgctttttgt cgccccgcgg tatcctgagc tacgatcatc
     3421 tgccgcatga ccattagccg gtcgccggta aagaacatgt gctcggtccg gcagagccca
     3481 attccttcag cgccgaaatc gcggccccgg tgggcgtcgg ccggcgtgtc ggcgttgacc
     3541 cg
//
LOCUS       DASRPQ010002420         1096 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_916035, whole genome shotgun sequence.
ACCESSION   DASRPQ010002420 DASRPQ010000000
VERSION     DASRPQ010002420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_916035"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(405..569)
                     /locus_tag="VFD73_27275"
     CDS             complement(405..569)
                     /locus_tag="VFD73_27275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77674.1"
                     /translation="MRALVEAQIGRFKQVIGAALRFHTDAAQATEIAIAVEVLNRILD
                     FGRPESVRVA"
     gene            713..880
                     /locus_tag="VFD73_27280"
                     /pseudo
     CDS             713..880
                     /locus_tag="VFD73_27280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084489.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
     gene            949..>1096
                     /locus_tag="VFD73_27285"
     CDS             949..>1096
                     /locus_tag="VFD73_27285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012650068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HZI77675.1"
                     /translation="MPHKYNAERRHHLPRPKRRVTNWAEYHEALRSRGSLTVWFTDEA
                     IAAWK"
BASE COUNT          167 a          344 c          360 g          225 t
ORIGIN      
        1 acgttcacgc tgaatataac accgtcgagg gtggtttatt tccgttcctg ccggtcagtt
       61 accgccgata ttcctgatcg cgatctcaat cccgctcgtc ccccggtccc cgatgatgct
      121 cgccagctgc ttcctgccgg cgttccggca tccgctcctc catctggcag gcgtcgcagt
      181 cgccgtgctg gcaagcctcg cgaacccgct gactgaaccg ttccttcatg tggcagcgtg
      241 ttgcatggag gtgatggctg gggtagggag ggctgctgtt ccccctgctc ggattgtctg
      301 accatgccgc ataaggccaa cggcgctcgt cgccatcata tcccgcggca gcgtgttgca
      361 tggaggtttt gaacggcgga gaaggccctt ttcccggctg ctgctcacgc gacgcggacg
      421 gactccgggc gtccgaaatc gagtatgcgg ttgaggacct cgacggcgat cgcgatctcg
      481 gtagcctggg cagcgtcggt gtggaagcgc agcgcggcgc cgatcacctg cttgaagcgg
      541 ccgatctgag cctccaccag ggcgcgcaag ttgtactgac gtgttcgctg ccagcccaac
      601 cgccccttcg tggcgatctg ctggatatgg cggtcgcgct gggtgggcgg gcatcgtcaa
      661 gttggcgacg ggctgggttg ccggaccgag gccgatcggg tatgaggcgg ccatgacgcg
      721 ctcgaccccg ccccgctaca ccggtcaccg cttccctccg gagctgatca gctacacagt
      781 ctggctgtac ttccgctttc cgctcagcct gcgcatggtt gaggagatgc tggccttccg
      841 cggcctcgag gtcagctacg agaccatccg ccagtggggc agcgtgttgc acggatgtgc
      901 cggatggcgt aggggatggt ctgtttcgca gctccggatc tcgccttcat gccgcataaa
      961 tacaatgccg agcgtcgcca ccaccttccg cggccgaagc ggcgcgtgac gaattgggca
     1021 gagtatcacg aggcgctgcg gtcgcggggc agtctgaccg tgtggtttac ggatgaggcg
     1081 attgccgcct ggaaag
//
LOCUS       DASRPQ010002421         1078 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4684524, whole genome shotgun sequence.
ACCESSION   DASRPQ010002421 DASRPQ010000000
VERSION     DASRPQ010002421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4684524"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            638..1045
                     /locus_tag="VFD73_27290"
     CDS             638..1045
                     /locus_tag="VFD73_27290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77676.1"
                     /translation="MYSQAAPLPSLAPQALSQPILPGWLFANSINVTEENSSSPQTER
                     DIVTRYSYGRQLGRIVDVLGELIERWPGGAPDDPSVQRFAELRDDIEKIKTRGIVRAV
                     SELAEMKQRNPDEYARLAPKLREILEADPDKSH"
BASE COUNT          182 a          354 c          347 g          195 t
ORIGIN      
        1 agccctcctg gagcagtatg aggcgtgctt tggccagcat ccgcttctcc ccggcggaca
       61 ggccacggct ggcctcccgt cccgccaggt cgcggaccac ctcaatgacc tggaccagat
      121 cccctgatgc cagcttctcc aggttcgcct ttaccgctgc gaccaatcgc gtccatcctc
      181 gccaccgagc acagttacac cgcagccgat ctcgaaactc cctgggagtc ttgccctggg
      241 actaaagctc gttcccagga tgacagcgat cggacacact gtcatgccgc gatgcggtac
      301 gtccgggcgc cagagcgttg atctgtcggc tttccgcgcg cgcctgcctt gctcttggag
      361 cactgcgaac ggctctggtt gctaccccgg gccggggtgc tcgcggaagt aggtcccgaa
      421 gtgccggtgc tctgtgagcc gcaggggggc atgccggagc aggccgggag tcttcgccgg
      481 ctgcgtgggt cacggtatcg ggtgaacccg ggtccgaagg gccgccgact gggtcttcgg
      541 gctcttgagc ccgtggcggc gggcctatcg tcgtcttatg acttcacttc ccgacccgac
      601 gggctggctc gcgtggtggt ctgagctatg gcgtcaggtg tactcgcagg ccgccccgct
      661 gccttccctg gctccgcagg cgctcagcca gccgattctt cccggatggc tcttcgcgaa
      721 cagcattaac gtgaccgagg agaattccag ctcgccgcag acggagcggg acatcgtcac
      781 taggtacagc tacgggcgcc agctcggccg tatcgtcgac gtgctcggcg agctgatcga
      841 acgatggccc ggcggggcac ctgatgatcc gtccgtccag cgtttcgccg agctgaggga
      901 cgacatcgag aagatcaaga cgcggggcat cgtccgggcg gtttctgagc tagctgaaat
      961 gaagcagcgc aatccggatg aatacgcgcg gctggcgccg aaactgcggg aaatcctgga
     1021 agccgacccg gataaatcac actgaacagc cgcagcgacg acaaggactg cgcgctct
//
LOCUS       DASRPQ010002422         1199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3761000, whole genome shotgun sequence.
ACCESSION   DASRPQ010002422 DASRPQ010000000
VERSION     DASRPQ010002422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3761000"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1001
                     /locus_tag="VFD73_27295"
     CDS             <1..1001
                     /locus_tag="VFD73_27295"
                     /inference="COORDINATES: protein motif:HMM:NF019352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HZI77677.1"
                     /translation="PGNWLFHCHFSPHVVPARARLNAPSRDSRDRPTHDPGEHMAGLI
                     MGITVRPAAGYREPARRKPRRLHLFVQEGIGRGRAPRAMGAVLQRDHRLPAADSVEIP
                     GSTLVLTRNQPTDIVVVNRLKEPTAIHWHGIELESYSDGVAGWSGGANHLAPSIMPGD
                     SFIARLTLRRAGTFIYHTHLNDIEQLTSGVYGGIVVLDQGRRFDRRHDHLFVIGWDGP
                     AKRGMLPHLLINGDSLPKTLAMDAQAAQRLRFINIGAAGLVRISLSRDSAPVSWRRLA
                     KDGAELPPKQAIRGSSAFVIAAGETYDFEFTPEPGEYRLSAEIQEKPLWTQRVVAQ"
BASE COUNT          225 a          383 c          363 g          228 t
ORIGIN      
        1 ggccgggaaa ctggctcttc cactgccact tcagccctca cgtagtaccg gcccgcgcgc
       61 ggctgaatgc gccctcacgg gacagccgtg accggccaac ccatgatccg ggggagcata
      121 tggcgggact catcatgggg attacggtgc ggcccgctgc gggctatcgc gagccggcgc
      181 gacgaaagcc acgacggctg catctttttg tgcaggaagg gatcgggcga ggtcgagctc
      241 cgcgtgcgat gggcgccgtg ctgcagcggg atcaccgtct gccggcagca gactcggtgg
      301 agatccctgg ctccactctg gtactcactc gcaaccaacc gacggacatt gtggtggtga
      361 atcggctcaa ggagcctacg gcgattcact ggcatggcat cgagctcgag agctactccg
      421 acggcgttgc cggttggagc ggcggggcca atcacctggc cccttcaatt atgccaggcg
      481 actcattcat cgctcggctc accctccggc gtgccggaac cttcatctat cacactcacc
      541 tgaacgacat cgagcagctc acgtctggtg tgtacggcgg gatcgtagtg ctcgatcagg
      601 gtcgccggtt cgatcggcgg cacgatcacc tgttcgtcat cgggtgggac ggcccggcta
      661 aacgagggat gctgccgcac ctcctgatca atggtgactc actccccaag actctcgcca
      721 tggacgccca ggcagcccag cggctgcgtt tcatcaacat cggcgccgcc ggactggttc
      781 gcatctccct cagtcgcgac agtgcaccgg tgtcctggcg cagactcgcg aaggacggtg
      841 ctgagcttcc gcccaagcaa gcgattcgag gatctagcgc gtttgtgatc gcggcgggag
      901 agacctatga cttcgagttc acacccgagc ccggcgagta ccgactcagc gctgaaatcc
      961 aggagaagcc gctctggacc cagagggtag tggcacagta gctccacctt catctctgtg
     1021 cgggtccgag aatcctttcg acacgcgtag ggtacaggca tattccgcac agacatctct
     1081 catcatcaac tccagtccgg gaggtagccc gtggcttcag tcccctatcg aattaccgtc
     1141 cacaatatcg aagcgtgtaa ctgcggtacc gcatgtgatt gccagttcag cgggtttcc
//
LOCUS       DASRPQ010002423         1426 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1225122, whole genome shotgun sequence.
ACCESSION   DASRPQ010002423 DASRPQ010000000
VERSION     DASRPQ010002423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1426
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1225122"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..400
                     /locus_tag="VFD73_27300"
     CDS             <1..400
                     /locus_tag="VFD73_27300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="plasmid pRiA4b ORF-3 family protein"
                     /protein_id="HZI77678.1"
                     /translation="HAFDIAGRQYGDPDSLDEVADEERLTLNKVRTTGVSRFTYTYDF
                     GDNWEHTVLIERPRRPLESGRYPACIAGKRNCPPEDCGGPWVTRTFSPCWRTPPIPTI
                     WSGSSGSARALILRRSPSKRRMRGSLNGSR"
BASE COUNT          238 a          466 c          432 g          290 t
ORIGIN      
        1 ccatgccttc gacatcgccg gccgccagta tggcgacccc gacagcctcg acgaggtggc
       61 cgacgaggag cggctgaccc tgaacaaggt gcggaccacc ggcgttagcc gctttaccta
      121 cacctacgac ttcggcgaca actgggaaca cacggtcctg attgagcgcc cccggcggcc
      181 gcttgagtcc ggtcgctacc ccgcctgtat tgcgggaaaa cggaactgcc cgcccgagga
      241 ctgcggcggt ccctgggtta cgaggacctt ctcgccgtgt tggcggaccc cgcccatccc
      301 gactatctgg agcgggtcga gtgggtcggc gagggctttg atcctgaggc gttcgccatc
      361 gaagaggcga atgcgaggct cgctgaacgg ttcgcgctaa cataagccag caaccaggcc
      421 caggtcccgt cagtgcctca actcacccct ccgacgtgag caattacgtt ctgcgtatcc
      481 tgaaaggaac aattgaggag tcgaggccca agtgcggagt cctcgcaaga ttttatgcga
      541 acacctgttc gtgtgggata caggcccatc ttggacatag gggccttttc gtgacgaacc
      601 gcacccttac acgcccttcc agtccataag agggcatatc attccctttc agtccttttg
      661 gtttacttct gtgcacttcc gtgcgcctct gtgcacttcc atggaacggg tttcctcaaa
      721 tgccgttcgc cagcgctcca gggcggcctc cagccttgcg ttcggcagcg gcggcgcagg
      781 cttcggtctg ctctcgccca taagcacgct tcgctcttga agggctgctg tccttatggc
      841 gagagcgggc cgcggcctcg gtcgctggcg ggcgcggttg aggcccggga cgctgggccg
      901 ctgatgccgg gcgtcgctcc cgagccttgt tcgcccgcgc gttggcctgc cagaacagcc
      961 cacgatagtc ggccccgagg ttctgtcagg tctcgcgccg aatcgtgcga tcggcccaag
     1021 atggtgtggt gcttcgcggc caaccgccac aataggcagt ccccctgact cgcgtttggc
     1081 gccagacctg acagaactgg acttccttgt gcagcgcctc acgctcggcc tttcggggtt
     1141 cggcttcgac ggccaaaacg gcggagggtg gcccggcgag gtcccggatc ggctcggggt
     1201 tggccaccag ggcctgcaca agccagatcg cttggggcaa agcggctcga tcagagccgt
     1261 ctactctgcc atcggtatat ggccctcatc cagttcactg tcctttccaa ggatgcgctg
     1321 ccgaacccgc ctgctgccct ctggcagcaa ggaccggttc tgacgtacgc gaacgctgat
     1381 ttttataacc tttatccgtg gggtgcagct ttttgcaccc tatcag
//
LOCUS       DASRPQ010002424         1316 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4052424, whole genome shotgun sequence.
ACCESSION   DASRPQ010002424 DASRPQ010000000
VERSION     DASRPQ010002424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4052424"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(123..>1316)
                     /locus_tag="VFD73_27305"
     CDS             complement(123..>1316)
                     /locus_tag="VFD73_27305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77679.1"
                     /translation="RVFEIIKRMLMKDPFDRFQTCEELIASFQNQPIAAPGAVRSSIA
                     TFVPAGAGVASMGGPGSGAGLPPPILSQPTTPLDSPLVNRRLTPRERRELPRRVADRS
                     VAMRHSNSSWAWLWIILAVLGAAGGAFYYFTAHGFAPGKIASDTAGATTTPVRDTSAL
                     RDSGAVVPGLVQRDSSIAGSSPPRDTTAKAPPRDSSLITPSASSPDVIGPVDSGGIRL
                     VGLPRGSTVMIDEQPVTQALTKLAPGPHALAISAPRYNFYSDTIVVRPGQIEELTPQL
                     TQVGAPVPVRKGELKSSGNGCVPGPGYNAEGVCFEERPKPVNPPFVTPPPDAQPNPKP
                     SLLWVKVSAEGRTVDIMRLKPSNDPAFERAVRNFVWTVTWHPALKDGAPVDAWTQMLF
                     PPTPQ"
BASE COUNT          251 a          399 c          435 g          231 t
ORIGIN      
        1 acagtgacat ctcccatgac agcagcggtc ggggctatga acgcggtcgg atggatctta
       61 agcatccgtc ggcaaggctc gtttgcaggt ggatgaaagc ccaagaccca cggagagggc
      121 ggttactgcg gagtgggtgg gaagagcatc tgggtccagg catccaccgg cgccccatcc
      181 ttcaaggccg ggtgccaggt caccgtccag acaaagttgc ggaccgcgcg ctcgaaggca
      241 gggtcgttgg agggcttcag gcgcatgatg tcgacagtac gaccttcggc tgaaaccttt
      301 acccagagaa gcgaaggttt gggattcggc tgggcatcgg gcggcggcgt gacaaatggc
      361 ggattcaccg gcttgggccg ttcctcgaaa cacacgccct cggcgttgta gccgggaccg
      421 ggaacacatc cattgccact gctcttgagc tcgcccttcc gtaccgggac aggtgcgcct
      481 acctgagtaa gctggggcgt gagttcttcg atttgccctg gacgcacgac tatggtgtcg
      541 gagtagaaat tgtaacgggg cgccgagatg gcgagtgcgt gcggtcctgg agcgagcttg
      601 gtgagtgcct gcgtcaccgg ctgctcgtcg atcatcaccg tcgatccccg aggcagcccg
      661 accagccgga ttcctccact atccaccggt ccgatgacat cggggcttga agcggagggg
      721 gttatgagag aggaatcgcg gggtggagct ttggctgtcg tatcccgagg cggcgagctc
      781 cccgcgatcg aggaatctct ctggaccagc cccggcacca ccgccccgct gtcccgcaga
      841 gcagaggtgt ctcggaccgg tgtcgtggtc gcgccggccg tatccgacgc aatcttgccc
      901 ggagcaaagc catgggcggt gaagtaatag aatgccccac cggccgcccc caacaccgcc
      961 aggatgatcc agagccaagc ccaggaggag ttgctatgcc gcatcgcgac ggaacgatcg
     1021 gccacccgcc gaggcagctc gcgacgctcg cggggagtca gccggcgatt caccagcggt
     1081 gagtccagtg gagtcgtggg ttgactcaga ataggcggcg gcaaacccgc tccgctccct
     1141 ggacctccca tgctcgcgac ccccgctcca gcgggcacga aggtggcgat gctgctccgg
     1201 acggcgccag gggcggcaat cggctggttc tggaacgaag cgatcagctc ttcacacgtt
     1261 tgaaatcgat cgaacggatc cttcatcagc atccgtttga tgatttcgaa tacccg
//
LOCUS       DASRPQ010002425         1092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2476978, whole genome shotgun sequence.
ACCESSION   DASRPQ010002425 DASRPQ010000000
VERSION     DASRPQ010002425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2476978"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1035
                     /locus_tag="VFD73_27310"
     CDS             <1..1035
                     /locus_tag="VFD73_27310"
                     /inference="COORDINATES: protein motif:HMM:NF033592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZI77680.1"
                     /translation="KPSAFIELNRHLVQRWYHDAPVQRWRGFDLRAIDGSTVRLPDTP
                     EVIAQFGQMFPAHSDPVTLARISQVYDPLNKLILDALIAPYHRDERDLPVEHLAALEA
                     GCLLLLDMGYPAFRVFAALQTRKIAWCARVALDTWSVVREFLAAGQADAAVTLEPHTE
                     ALADCRAHGLPTTPIRVRLIRVLLPTGNIEVLMTSLLDPDIYPAEEFAELYHLRWAQE
                     ECYKCFKSRVEVENWSGKSALTIFQDFHAKVLALNLTAVLASTAQAIVDDRCRDDGHP
                     KQINMTYALCAMKNALVCLLTRANPVELLRRLIDIVARTVEPVRPGRSYPRRKGPRLH
                     GYYMAYKPCT"
BASE COUNT          187 a          387 c          311 g          207 t
ORIGIN      
        1 aagccatccg cgttcatcga gctcaaccgc catctcgtcc agcgctggta ccacgatgct
       61 cccgttcagc ggtggcgcgg tttcgacctg cgcgccatcg acggatcaac ggtgcgcctg
      121 cccgacacgc ccgaggtgat cgcccagttc ggccagatgt ttcccgccca cagtgatccc
      181 gtcaccctgg cgcggatctc gcaggtctac gacccgctca acaagctcat cctggacgcc
      241 ctcatcgctc cctatcaccg ggacgagcgg gaccttccgg tcgagcatct cgccgctctt
      301 gaggcgggct gcctgctgct gctcgatatg ggctacccgg cgttccgggt gttcgctgcc
      361 ttgcagacgc gcaagatcgc ctggtgtgcc cgcgtcgccc tcgacacctg gtcggtggtc
      421 cgggagttcc tggccgccgg ccaggccgac gccgcggtca cgctggaacc ccacaccgag
      481 gctctggccg attgccgggc ccacggtttg cccacgaccc cgatccgggt gcgcctgatc
      541 cgtgtcctgc tgcccaccgg caacatcgag gtgctgatga cctcgttgct cgatcctgac
      601 atctatccgg ccgaagagtt tgccgagctg tatcatctgc ggtgggccca ggaggaatgc
      661 tacaaatgct tcaagtcgcg cgttgaagtc gagaactgga gcggcaaatc cgccctgacg
      721 atcttccagg acttccacgc caaggttctc gccctgaacc tgaccgcggt gttggccagc
      781 accgctcagg cgattgttga cgatcgctgc cgcgacgacg gtcatcccaa gcagatcaac
      841 atgacctacg cgctgtgcgc catgaagaat gcgctggtct gtctgctgac ccgcgccaat
      901 cctgtggagc tgctgcgtcg cttgatcgac atcgttgccc gcacggtcga acccgttcgc
      961 ccaggacgct catacccccg gcgcaaaggc ccacgcctcc acggctatta catggcctac
     1021 aagccatgta cgtagagacc ctcaatacca gagcccgcaa gttctgacct gtagcggata
     1081 actgacgctg ca
//
LOCUS       DASRPQ010002426         1279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1225408, whole genome shotgun sequence.
ACCESSION   DASRPQ010002426 DASRPQ010000000
VERSION     DASRPQ010002426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1225408"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..596
                     /locus_tag="VFD73_27315"
     CDS             <1..596
                     /locus_tag="VFD73_27315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI77681.1"
                     /translation="TVRRHLQQGVVDDLLFNVVFGRLTPTGVRAILLGSGMPGLETAI
                     LHHIATFGFLNYRELRDRFGVSAGTLRDRVARLQMAGLLLQPSDGGQQYFAGPAARAY
                     LRICEQLYRLAASQLPLAPETEEVLRTLQIEPVRDLAKDYRYSDDWLGVKTPEAGFNI
                     MVGLSVAARYQWNVDWDNLSMTAHPDELDRTKWLQFG"
     gene            962..>1279
                     /locus_tag="VFD73_27320"
     CDS             962..>1279
                     /locus_tag="VFD73_27320"
                     /inference="COORDINATES: protein motif:HMM:NF026041.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZI77682.1"
                     /translation="MQGDGSAATAMLGLPGFVLLAVSEYDGEVEQAVETTAGEEFCRR
                     CGVAAVPHGRRPVRVRDLPAAGRPVTLIWVKRVWRCVEPRCSAGTWTETSEHIGARAS
                     LTER"
BASE COUNT          227 a          370 c          438 g          244 t
ORIGIN      
        1 ctacggttcg gcggcatctc cagcaggggg tggtcgacga tctcctattt aacgtagtat
       61 tcggacgcct gacgcccacc ggcgtccgag cgatcctatt gggctcaggt atgccgggcc
      121 tggaaaccgc catcctccac cacatcgcaa cgttcgggtt cctcaattat cgtgaattac
      181 gagacaggtt cggcgtgagc gcgggaacac ttcgtgatcg ggtcgcacgc ctgcagatgg
      241 ccggtcttct gcttcaaccc agcgacggcg ggcaacaata ctttgctggt cctgccgcca
      301 gagcatactt gcgcatctgt gaacaactat accgactagc tgcgagccag ctgccactcg
      361 cgcccgagac cgaagaagtc cttcggacac tccagataga gcccgtgcgg gatctagcca
      421 aggactatag atacagtgac gactggctgg gcgtcaagac tcccgaggca ggctttaaca
      481 ttatggttgg actatcggta gcagctaggt atcaatggaa tgtcgactgg gataatttgt
      541 ctatgactgc acatccggac gaacttgacc ggacgaagtg gttgcaattt ggctagtttg
      601 atgcctgtaa acagataatc gttggccact ggtgaccctg ttgactctcc ttgctgcggt
      661 gcgcggacac gcgaccgcgc cgccagtcgc acaggcgcac gctcaccccg atagtcaatc
      721 gcttcgccag cgcgactccc tgcatccgct catgccgcct ctagtgcgtg cgcattccgc
      781 tcggagtcga tgtggcatcg cgaccgaagc ccgggcgctc gccggctagc gtgcgaggtt
      841 tgggggctct tcgtcacgaa gcgtggtgag cgtctggcga cacggcggtc agcctgggcc
      901 tgaaagcagg cctggggcct cacgatccgt ggtggttggg aacacggatg aggaggcccc
      961 agtgcagggt gacggtagcg cggcgacggc gatgctgggt ctgcccggct tcgttctgct
     1021 ggcggtgtca gagtacgacg gcgaagtcga gcaggcggtc gagaccacgg cgggcgagga
     1081 gttctgccgc cggtgtggag tagcggcggt gccgcatggg cggcggccgg tgcgggtgcg
     1141 ggatctgccg gcggcggggc gaccggtgac gctgatctgg gtgaagcggg tgtggcggtg
     1201 cgtcgagccg cgctgttcgg ctgggacctg gacggagacc agcgagcaca tcggggcccg
     1261 ggcgtcgctg accgagcga
//
LOCUS       DASRPQ010002427         3060 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_600472, whole genome shotgun sequence.
ACCESSION   DASRPQ010002427 DASRPQ010000000
VERSION     DASRPQ010002427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3060
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_600472"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..170
                     /locus_tag="VFD73_27325"
     CDS             <1..170
                     /locus_tag="VFD73_27325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000166786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase"
                     /protein_id="HZI77683.1"
                     /translation="ETIEQRQGLKIACPEEIAYRMGYIGAEQLERLAEPLKQTAYGQY
                     LRQLIQEPQAE"
     gene            167..715
                     /gene="rfbC"
                     /locus_tag="VFD73_27330"
     CDS             167..715
                     /gene="rfbC"
                     /locus_tag="VFD73_27330"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001556222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HZI77684.1"
                     /translation="MKVSSSPIEGLLLLEPVVHRDARGFFLESWRQDRLSALGLPTMF
                     VQDNHSHSVQGTLRGLHYQLTQPQGKLVRVVSGEVFDVAVDLRRSSPTFGQWDSAVLT
                     GENQRQLWIPPGFAHGFYVLSDSADLLYKCTEYYFPEGDRAIRWNDPELGIEWPLLNG
                     CPPILSPKDAAAPLLRNATCYP"
     gene            712..1593
                     /gene="rfbD"
                     /locus_tag="VFD73_27335"
     CDS             712..1593
                     /gene="rfbD"
                     /locus_tag="VFD73_27335"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HZI77685.1"
                     /translation="MSRGRPVTLITGAQGQLGQELCAIAPADWQVIAYGSRELDITDS
                     DAVAALCSRERPDVVIHAAAYTKVDEAERQPARAEAVNSVGAATVARAARDVGARMVY
                     VSTDFVFDGRQGRPYTPDDMPNPLNVYGRTKRSGEIEVLRISNGDALVVRTAWVYSAR
                     GDNFVRTMLRLMREQDSLSVVSDQIGTPTWARSLAEALWVAAASASVHGIVHWTDAGV
                     ASWYDFAIAIQEEALELGALKRALPIRPIRSDQFPRPAQRPAYSVLDKTTGWAALGPA
                     RHWRTNLRCMLQELTRG"
     gene            1586..2707
                     /gene="rfbB"
                     /locus_tag="VFD73_27340"
     CDS             1586..2707
                     /gene="rfbB"
                     /locus_tag="VFD73_27340"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000699467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HZI77686.1"
                     /translation="MAKLLVTGGAGFIGANFVRYWLATHPGDHVVVLDALTYAGNQFS
                     LEGVLERPECRFVKGDICTPNLAAELLRENRIDTIVHFAAESHVDRSIRGPDAFVHTN
                     IEGTHELLKAARQVWLEEGKDSQHTRFHHISTDEVYGSLLPTDRPFTELSPYAPNSPY
                     AASKASSDHLVRAYHHTYGLPVTTTNCSNNYGPYQFPEKLIPLMLVNLLDGRPLPVYG
                     DGQHVRDWLYVEDHCRAIDRVLADGAVGETYNVGGRNEWKNLDIVKLLCSLVDEAFGS
                     DTDLGRRFPGCPAATGKSTLGLVTFVPDRPGHDRRYAIDAGKIERELGFRPLESFETG
                     IRKTLAWYLVNERWWRAVMDGSYREWVRTHYRTTVPSET"
     gene            2712..>3060
                     /locus_tag="VFD73_27345"
     CDS             2712..>3060
                     /locus_tag="VFD73_27345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HZI77687.1"
                     /translation="MNQARTTAPADGILESARRVIKTEAAAIAALEARLDQKFLRAVE
                     VMLSAPGRVIVSGIGKSGIIARKVAATLTSTGTPAIFLHPLDALHGDLGVVGVSDVAL
                     LLSKSGESEELLKL"
BASE COUNT          580 a          920 c          957 g          603 t
ORIGIN      
        1 tcgagacgat cgagcaacgc cagggactca agatcgcctg tcctgaggag atcgcatacc
       61 ggatgggcta cataggtgcc gaacagctgg agcgccttgc cgaaccgctg aagcagacgg
      121 cctatggcca gtatctccgt cagctcatcc aggagccgca ggccgaatga aggtgtcgtc
      181 aagcccgatc gagggtttac tcctcctcga gcccgtggtg catcgcgatg ccaggggatt
      241 cttcctggag agctggcggc aggatcggct ctcggctctc gggctgccta cgatgttcgt
      301 gcaggacaac cacagtcatt cggtgcaggg cacgcttcgc ggcctgcatt atcaattgac
      361 ccaaccgcag ggcaagctgg tgcgagtggt gtccggtgaa gtgttcgacg ttgcggtcga
      421 tttacgccgc tcgtctccca ccttcggtca gtgggacagt gcggtcctga ccggcgagaa
      481 ccagcggcaa ctctggattc ctcccggatt cgcgcacggg ttttatgtgt tgagcgactc
      541 agccgatctg ctctacaagt gcaccgagta ctacttcccg gagggcgatc gagcgatccg
      601 gtggaatgat cccgagttgg ggatcgagtg gccgttgctg aacggctgtc ctccgattct
      661 ctcccccaaa gatgcggcgg cgccgctgct ccgaaacgcc acctgttatc cgtgagtcgc
      721 ggccggccgg tcaccctgat caccggagct caggggcagc tcggccagga gctttgcgcg
      781 atcgcccctg cggactggca ggtcatcgcc tatggctccc gcgagctcga catcactgac
      841 tctgacgcgg tagctgccct ttgcagccga gagcggcccg acgtcgtcat tcatgccgcg
      901 gcatacacga aggtagacga ggccgagcgg cagcccgcgc gcgccgaagc ggtcaactcg
      961 gtcggtgctg ccacggtggc tcgtgctgcg cgggatgtcg gcgctcggat ggtctacgtg
     1021 tcgaccgact tcgtctttga cggaaggcag ggccgtccct acactccgga cgatatgccg
     1081 aatcccttga acgtatacgg cagaaccaag cgctccggcg aaatcgaggt tctacgcatc
     1141 agcaatgggg acgcgcttgt cgttcgcacc gcctgggtct actccgcgcg tggcgataac
     1201 ttcgttcgta ccatgctgcg cctcatgagg gagcaggact cgctctctgt cgtcagcgac
     1261 cagataggga ccccgacctg ggctcgcagc ctggcggagg cgttgtgggt tgcagcggcg
     1321 tcggcctcgg ttcacgggat tgtacactgg accgacgcgg gagtcgcgag ctggtacgat
     1381 ttcgcaatag cgatccagga agaggcgctc gagctcgggg cactgaagcg agcactcccc
     1441 attcgtccaa ttcgcagtga tcagtttcct cgaccagccc aacggccggc gtacagcgtc
     1501 ctggacaaga ccaccggctg ggctgctctg gggccggctc ggcactggcg aaccaacctg
     1561 aggtgcatgt tgcaggaact tacccgtggc taagctgctg gtgactggag gggcgggctt
     1621 catcggcgcc aattttgtga gatattggct cgccacgcat ccaggagacc acgttgtggt
     1681 attggatgct ctcacctatg ccggcaatca gttcagcctc gagggtgtgc tcgagcgccc
     1741 ggagtgccgg ttcgtgaaag gagacatctg cacccctaat ctcgccgcgg agctactgcg
     1801 cgagaacagg atcgacacca tcgttcactt tgcggcagag tcacacgtgg accgctcgat
     1861 acgaggtccc gatgcgtttg tgcataccaa catcgagggc acccacgaac tgctcaaggc
     1921 ggcgcgacaa gtctggctgg aggaagggaa ggacagccaa cacaccaggt ttcatcatat
     1981 atcgactgat gaggtttatg gatctctcct tcccaccgat cgtccgttca ccgagctgtc
     2041 gccgtacgcg ccgaattctc cctatgcagc gagcaaggcg agctcggacc atctggttcg
     2101 agcgtatcat cacacctacg gtcttccggt taccaccacg aattgctcca acaactacgg
     2161 accttatcag tttcccgaaa agctgatccc actcatgctg gtgaatctcc tggacggccg
     2221 gccgctgccg gtatacggag acggacagca tgtcagggac tggctgtatg tggaagacca
     2281 ctgcagggcc atcgatcggg tcttggccga tggagctgtc ggtgagacct acaacgtggg
     2341 cggccggaat gagtggaaga atctcgacat cgtgaagctc ctttgtagtc tggtagacga
     2401 ggcctttggt agcgataccg atctgggccg gagatttccc ggctgtcccg ctgcgacagg
     2461 gaagtccacc ctgggcctgg tcaccttcgt gccggatcgc cccggtcacg atcggcgcta
     2521 cgccatcgat gccgggaaga tcgagcgaga gctggggttt cgtccgctgg agagcttcga
     2581 aaccggtatt cggaaaacgc tggcgtggta tctcgtcaat gagcgttggt ggcgagcggt
     2641 catggacggg agctaccggg aatgggtccg aactcactat cgcacaacgg tcccgtccga
     2701 gacctgatcc catgaaccag gcgagaacca ccgcacctgc cgatgggatc ctggaatcag
     2761 cccgccgtgt catcaagacg gaggcggcgg ccattgccgc gttggaagct cgtttggacc
     2821 agaagttcct ccgcgcggtg gaggtcatgc tgagtgctcc gggccgggta atcgtgtccg
     2881 gaatcggcaa gtcaggtatc attgcccgca aagttgccgc taccctcacc tcgacaggaa
     2941 cacccgccat tttcctgcat cctctggacg ctctgcatgg cgatctcgga gtagtaggag
     3001 tatccgatgt ggcgctcctc ctatccaaga gcggcgagtc tgaggagttg ctgaagctcc
//
LOCUS       DASRPQ010002428         1802 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3107568, whole genome shotgun sequence.
ACCESSION   DASRPQ010002428 DASRPQ010000000
VERSION     DASRPQ010002428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1802
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3107568"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1740
                     /locus_tag="VFD73_27350"
     CDS             <1..1740
                     /locus_tag="VFD73_27350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77688.1"
                     /translation="DSAKAKLRRALAIDPTYSTAQLWMAQVMAWSGEAAESWRQYASA
                     ALAPRDRWFRQEQFGNSDLGPHDRYMAQGLLALAEQRYRDACDRFRSLIAQDSLDFGA
                     WYGLGDCQGKDPVVVRDSASPSGWSFRGSYQGAATAYRRALEILPSVHLAFRGEAFSR
                     LPDLLFTESYRIRRGFALTPDTLRFGAYPSMERDTLEFVPRPITEVTAAKPGAIPSSV
                     NAALAHNQEMLREVATTWVKAFPDQPEPHETLALVLETLGELTAGRVKDFSAVGEIHR
                     ARALASDRLTSIRLANTETRFLVKSEQMSQARALADSVLRANPNPTLEEARQLRGLAA
                     LTGHVHLTAQLYRRAAPDITFLTEDWEEVNLPLALTDAALGLSAYSSFGTPMDSMVAL
                     EDRVERLIPSYVAPGRRTKVRQALLDHPTLLAFPERGIRPMHRKKAGRYLLQMQWLLG
                     QKDTTGLRESFKQIKEVQRDLRPGDVAFDGTYHEAWLLLAIGDTAQATQLLDLSLDAL
                     PTMRTEILDQLPQVATLVRGMALRADIAAARHDSTTADRWARDVVLLWSGADRELQPT
                     VDRMRSLVQARGN"
BASE COUNT          326 a          588 c          567 g          321 t
ORIGIN      
        1 gattccgcca aggccaagct caggcgggcg ctcgcgatcg atcccaccta tagcacggct
       61 cagctctgga tggcacaggt tatggcctgg tcgggcgaag cggcggagtc gtggcgccag
      121 tacgccagcg cggcgctggc cccgcgtgat aggtggttcc ggcaggagca gttcggcaac
      181 tctgatctgg gcccccacga tcgatacatg gcacaggggc tcttggcgct ggccgagcaa
      241 cgctaccgag acgcgtgcga tcgcttccga agtctcatcg cccaggattc cttggacttc
      301 ggggcgtggt atggcttggg cgactgtcag ggcaaggacc cagtcgtggt ccgcgattct
      361 gcaagtccgt ccggttggag cttccgcggg agctatcaag gagcggcgac ggcctacagg
      421 cgcgccctgg aaatcctccc gtcggttcat ctcgcgttcc gaggtgaggc gttcagccgg
      481 ctgcccgacc tgctgttcac cgagtcctac cgaattcgac gcgggtttgc gctgacacca
      541 gacacgctcc gattcggtgc ctacccgtct atggagcgtg acacgctgga gttcgttccg
      601 cggccgatca cggaggtcac tgccgccaag cctggtgcca ttccctccag cgtgaatgca
      661 gccctggcac ataatcagga aatgctgcgc gaggtggcca ccacctgggt caaagccttc
      721 ccggaccagc cggagccgca cgagacactg gcgctggtgc tggagacgtt gggagagctg
      781 acagcgggtc gggtaaagga cttctccgca gtcggcgaga tccaccgggc ccgcgccctg
      841 gcaagcgatc gcctcacatc gattcgcctg gcgaacaccg aaacccggtt tctcgtcaag
      901 tctgagcaga tgtcccaggc ccgcgctttg gctgattccg tgctgcgggc caatccgaat
      961 cccactctcg aggaagcgcg acagcttcgc gggctcgcgg cgctcaccgg tcacgtacac
     1021 ctgacggctc agctgtaccg gcgagcggcc cccgacataa cgttcctgac cgaggactgg
     1081 gaagaagtga acctgcccct ggccctcacc gacgcggcac tcgggctctc cgcctattca
     1141 tcctttggca cgcccatgga tagcatggta gcgctggagg atcgagtcga gcgactcatc
     1201 cccagctatg tggcaccggg caggcggacg aaagtaaggc aggcactgct cgatcatccg
     1261 acgttgctgg cttttcccga gcgcgggatc cgccctatgc atcggaagaa ggcgggtagg
     1321 tatctgctgc aaatgcagtg gttgttgggg cagaaggaca ccaccggact cagggaaagc
     1381 ttcaagcaaa tcaaggaagt ccagcgtgac ctccggcctg gcgacgtcgc gttcgacggc
     1441 acctatcacg aggcctggct gttgctggcg atcggcgata ccgcccaggc tacccaactc
     1501 ctcgacctct ccctcgatgc gctgcctacc atgcgcaccg aaatcctcga tcagctacct
     1561 caggtagcaa cgctggtgcg gggaatggcg ctccgcgccg acatcgccgc cgcccggcac
     1621 gattccacca ctgccgaccg gtgggctcga gacgtcgtgc tcctctggtc cggtgccgac
     1681 cgggagctcc aacctaccgt cgaccgaatg cggagcttag tgcaggccag aggcaactga
     1741 cctgcggttt gcagtactcg tggtatccag cccaggagca tttatgacga gcgcactgct
     1801 gc
//
LOCUS       DASRPQ010002429         1148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_299368, whole genome shotgun sequence.
ACCESSION   DASRPQ010002429 DASRPQ010000000
VERSION     DASRPQ010002429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299368"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..768
                     /locus_tag="VFD73_27355"
     CDS             <1..768
                     /locus_tag="VFD73_27355"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HZI77689.1"
                     /translation="HFLICELQRKMVVRQTSLPNVGGISAEGERLAFLMMVADGVGGG
                     VKGEEASRRALEAATQYVQQSMRCYYAASSADDEEFFEALTEAAHQCHADLIRRGESD
                     PEYRGMATTLTLYLGVWPRSYLLQVGDSRCYVLEQGKLSQMTRDQTMAQELIDLGVMS
                     SEGVQNTRLAHTLSSSIGGRQTEPVVTRRESKWGTVVLLCSDGLTRHVSDDRIAERLR
                     SMTSARQVCEDLLEEALAGGGSDNISLIVCRALQQGA"
     gene            901..>1148
                     /locus_tag="VFD73_27360"
     CDS             901..>1148
                     /locus_tag="VFD73_27360"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HZI77690.1"
                     /translation="MSNALNQLQAALSAHYRIERELGRGGMAVVYLAHDLRHDRPVAL
                     KVLHPELAQTLGTERFLREIKLAARLQHPHIVSVHDSGT"
BASE COUNT          201 a          363 c          369 g          215 t
ORIGIN      
        1 cacttcctca tctgcgagct gcaacgaaag atggtggttc gccagaccag cctgcccaac
       61 gtcggtggca tcagcgccga gggcgagcgg ctcgcctttc tgatgatggt ggcggatgga
      121 gtgggcggtg gcgtcaaggg agaagaggca agccggcggg cactcgaggc tgcgacccag
      181 tatgtccagc agagcatgcg ctgctattac gccgccagct cggccgacga cgaagagttt
      241 ttcgaggcgc tcaccgaggc ggcacaccag tgccatgccg atctgatccg tagaggcgag
      301 agcgaccccg aatatcgcgg catggccacg acgctcacac tgtatctcgg agtctggccc
      361 cggtcctacc tgctccaggt aggagacagc cgctgctacg tgctcgagca gggcaagctc
      421 tcgcagatga cccgcgacca gacgatggcg caggagctga tcgatctcgg agtgatgagc
      481 tctgagggtg tccagaatac ccgcctggca catacccttt cgagctcgat cggcggtcgg
      541 cagacggagc cggtggtcac ccgccgcgag tccaaatggg gcaccgtcgt cctgctttgc
      601 agcgacgggc ttacccggca tgtctcggat gatcgcatag cagagcggct ccgctcgatg
      661 acctccgctc gccaggtgtg tgaggattta ctcgaggagg cgcttgccgg tggcgggtcg
      721 gacaacatca gcctgatcgt ttgtcgggcg ctgcagcagg gggcgtgagg ggacagtcgg
      781 acggtcggtc gctcggtcgg acggtacccc gtcatttcga gcctttgcag gcaatgacct
      841 ctctctggtc cgccgagtta tacccttgta acttcggcca aggttctccc tgggatccgt
      901 ttgtccaatg cactgaatca acttcaggct gccctgtccg ctcattaccg gatcgagcgc
      961 gagctcggtc gcggcgggat ggccgtggtg tatctggccc acgacctccg ccacgaccgt
     1021 cccgtggcac tcaaggtgct tcatccggag ctggctcaga cgctcggcac cgagcgtttc
     1081 cttcgcgaga tcaagctcgc cgcccgcctg cagcatcccc acatcgtctc ggtccatgac
     1141 agcggcac
//
LOCUS       DASRPQ010002430         1241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4053268, whole genome shotgun sequence.
ACCESSION   DASRPQ010002430 DASRPQ010000000
VERSION     DASRPQ010002430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1241
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4053268"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..883)
                     /locus_tag="VFD73_27365"
     CDS             complement(<1..883)
                     /locus_tag="VFD73_27365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZI77691.1"
                     /translation="MGQVSTIGLDLAKSIFQAHGADASGAVVFRKRLRRDQVRPFLAA
                     QPPCTVAMEACGSAHYWAREIGMLGHAVRLIPPAYVKPFVKRQKNNATDAEAICEAAQ
                     RPTMRFVAPKSEQTQAAALVFRARDLLVRQRTQVINALRGHLFEFGIVVAKGPAHVPQ
                     LVQAVANPDEPLPEIARPVLQILIDTLHRLDEQIADLDREIVQRAKADETAHRLMTIP
                     GIGPVTAVALTALAPPAQTFRRGRDFAAWMGLTPLQHSTGSKQKLGATSKMGERTLRR
                     LLIIGASAVLRWAARHGA"
BASE COUNT          204 a          407 c          410 g          220 t
ORIGIN      
        1 gagcaccatg gcgggccgcc cagcgcagga cggcgctcgc gccgatgatc agcaggcggc
       61 gcagggttcg ctcgcccatc ttcgaggtcg cacccagctt ctgcttgctg cccgtcgaat
      121 gctggagcgg ggtcagtccc atccaagcgg cgaagtcccg cccgcgccga aaggtctgcg
      181 cagggggtgc cagggccgtc agggcgaccg cggtcaccgg gccgatcccg gggatggtca
      241 tgagccgatg cgcggtttcg tccgccttgg cccgctggac gatctcacga tccagatccg
      301 caatctgctc gtcgagccga tgaagcgtgt cgatcaggat ctggaggacg ggtcgggcga
      361 tctccgggag aggctcgtcc gggttcgcga cagcctgcac cagctggggg acatgagccg
      421 gtcctttggc caccacgatg ccgaactcga agagatgccc acgcagggca ttgatgactt
      481 gggtccgctg ccggaccagg agatcgcggg cccggaatac gagagcggcg gcttgggtct
      541 gctcgctttt gggagccacg aagcgcatgg ttgggcgttg ggcggcctcg cagatcgcct
      601 cggcatctgt ggcattgttc ttctgccgct tgacgaacgg cttgacgtac gccggcggga
      661 tcagccggac cgcatgcccg agcatgccga tctcgcgggc ccaataatgg gcgctgccgc
      721 aggcctccat cgcgaccgtg caagggggct gggccgccaa gaacgggcga acctggtctc
      781 gccgcagccg cttgcggaac accaccgctc ctgaggcatc ggctccgtgg gcctgaaaga
      841 tgctcttcgc cagatccaaa ccgatggtgc taacctgacc catggacgcc tccctcgagt
      901 gatgttcaac acctccactc tggcacacca aggccgttgg ggggcgtcca ccccatcagc
      961 cctggcctct ggccatcctc atccgggatc ggtgttgctg attgcaggat ttttgcggca
     1021 gagccggcgt acccaggatc atccatggcg ggacagctga aaggcttcga gatactctcg
     1081 cccaagtatc tcgcccggcg attatcgctc gcgcggggag ccctgtattt ccgttcctgc
     1141 ttgcaacatg tggaagcccc tccggcaact ccgaggtaac ctcgcggcca gtcccaatcg
     1201 gatcgcgttc gcctgggcgt tgcggggcac gatcgctaca g
//
LOCUS       DASRPQ010002431         1112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_601756, whole genome shotgun sequence.
ACCESSION   DASRPQ010002431 DASRPQ010000000
VERSION     DASRPQ010002431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_601756"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(446..1048)
                     /locus_tag="VFD73_27370"
     CDS             complement(446..1048)
                     /locus_tag="VFD73_27370"
                     /inference="COORDINATES: protein motif:HMM:NF025343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HZI77692.1"
                     /translation="MPGQRETQATRREQILEAAYEVALRRGIDGLTVRAVAARARLSH
                     SLVLFHFKRKDELGLALLDRVLAGTLALALPEEIRHIRKPRERLQALVRQELQRVALE
                     PRRLRLLLEFWTRGGHNAVIRQKIGAGLERYRTTFQDLIAEMPQGKASNRASPAGLAA
                     VAVSLIIGYPVQSMIDPEGLGTEEYLESVGGLLGPSGLAA"
BASE COUNT          189 a          357 c          357 g          209 t
ORIGIN      
        1 cggagaccgg cgtccaggag aaccaacggt tgccggactg cctccacgat ggcgacgctg
       61 tagtcgggca ggaaagtgga gggggatcca ttctcgagcc gaggtacttc ctcggcacga
      121 ctcagcgatt gcttcctggc cggcttcgac acgtcggatc tcgtttcaag cgcgcgggac
      181 acgatttctc atgagatgag tgaaactgcc tcagcccatg gtagagtggc tgaacggcat
      241 ccagagatgc tggcacttcc tgcagcgcgc ctcggggttg gatccggctc cggcacttgc
      301 agggcgcccg gaggagccac agctgggaca cgatccggga tcatgcgggt gccacgggtt
      361 gctgcaggcc cagcgaatct gacccgccgc cgtctgtcga accgggatca tcgggtagtg
      421 gtcgtccagg caaagaggca tcggtctacg ccgcgaggcc ggagggtccc aacagaccgc
      481 cgaccgactc cagatattcc tcggtgccga gtccctccgg atcgatcatc gactgaaccg
      541 gatatccgat gatcaggctc accgccaccg ctgcgagtcc ggccgggctg gccctgttgc
      601 tcgcttttcc ctggggcatc tccgcgatga ggtcctggaa tgtggttcgg tatcgctcca
      661 ggccggcacc gatcttctgc cgaatgacgg cattgtgacc tccgcgggtc cagaactcca
      721 gcagcagccg gagccggcgg ggttccagcg ccacccgctg cagctcctgc cgcaccagcg
      781 cttgcagccg ctcgcgtggc ttcctgatgt gccgaatctc ctcgggaagc gcgagcgcga
      841 gggtgccggc cagcacccgg tcgagcaggg ccaatcccag ctcgtctttc cgcttgaagt
      901 ggaataggac caggctgtga ctgagccggg cccgggccgc gacggctcgc actgtgagac
      961 catcgatacc gcgccgaagg gcgacctcat atgccgcctc caggatctgc tcccgtcggg
     1021 tggcttgggt ttctctctgc cctggcatgg gtccctccgt ggaagtcgct attgacctgc
     1081 tggttaatga agactagtat ttattaaccg ct
//
LOCUS       DASRPQ010002432         1009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3109751, whole genome shotgun sequence.
ACCESSION   DASRPQ010002432 DASRPQ010000000
VERSION     DASRPQ010002432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3109751"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1009)
                     /locus_tag="VFD73_27375"
     CDS             complement(<1..>1009)
                     /locus_tag="VFD73_27375"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77693.1"
                     /translation="VIEEAQDHDEEAIWQTVPLGGSITIHYTVRREGAQLLSRLLSVK
                     ERVSRETSRYASISVRELLALSAVRAGQLRLAYEEGQVALTLIEHLQGYALLKGYVQI
                     ALAQVYYQWNRLEEARELLRMVVHHAAAWQQLEQLAWGYAELIQVELARRDRPAAELA
                     LHEVEQLVQLERFGIYPGWLPALQAQCWLAQGQLEAASRWAVSFVFPEGAWEGRLYDA
                     FPVVIRVYFAERRWTEALELLERWSGHLDRPANIAITIPFLAQSLVALHHAGKIEQAH
                     RIAGRLFALTEPEGYLRVYLDEGEPMRQALLAWLTSHSGQHQPASSTIAYVSRLLAAF
                     E"
BASE COUNT          182 a          347 c          299 g          181 t
ORIGIN      
        1 tgctcgaacg ccgccaacag ccgtgagaca taggctatgg tggatgaagc cggttggtgc
       61 tgcccggagt gagaggtgag ccacgccagg agcgcctgtc gcatcggttc gccctcatcc
      121 aggtacacgc gcaggtagcc ctctggttcc gtcaacgcaa agaggcgccc tgcgatccgg
      181 tgggcttgtt cgatcttgcc tgcgtggtgc agcgccacca gcgactgggc cagaaacggg
      241 atggtgattg cgatattggc tggtcgatcc aggtgcccgc tccagcgttc cagcagttcc
      301 agcgcctccg tccagcgacg ctctgcgaaa tacacccgta tcacgaccgg gaaagcatca
      361 tacaagcggc cttcccatgc tccctctgga aagacgaagc tcactgccca cctggacgcg
      421 gcctcgagct gtccctgcgc cagccagcac tgcgcttgca gcgccggcag ccaccctggg
      481 taaatcccaa agcgctcgag ctgcaccagc tgttccacct cgtgcagcgc gagctcggcc
      541 gctggacgat ctcttctggc cagttcgacc tggatcagct cggcgtatcc ccacgcaagc
      601 tgctcgagct gctgccaggc ggcggcgtgg tgaacgacca tccgcagcag ctcacgcgcc
      661 tcctccaacc ggttccactg gtagtacacc tgcgcgagcg caatctggac atagcctttc
      721 agcagggcat agccctgcag gtgttcgatc agggtgaggg ccacctggcc ctcctcatag
      781 gccaggcgca gttgaccggc cctcacggcc gagagcgcga gcaattccct gacactgatg
      841 ctggcatagc gggaggtctc ccggctcacc cgctctttaa ccgagaggag ccgagacaac
      901 aattgcgccc cctcgcgtcg gaccgtatag tgaatggtga tactgccccc gagggggacc
      961 gtctgccaga tcgcctcctc gtcgtggtcc tgcgcctcct cgatcacct
//
LOCUS       DASRPQ010002433         1462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2480913, whole genome shotgun sequence.
ACCESSION   DASRPQ010002433 DASRPQ010000000
VERSION     DASRPQ010002433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1462
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2480913"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..468
                     /locus_tag="VFD73_27380"
     CDS             <1..468
                     /locus_tag="VFD73_27380"
                     /inference="COORDINATES: protein motif:HMM:NF013920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-ribbon domain-containing OB-fold protein"
                     /protein_id="HZI77694.1"
                     /translation="NWQACGEFRTLEAKGRKDMAKQSPIPDELDKPFYDACNQERLVA
                     QYCTKCLRYQFPPRPACTRCGNNASVEWRQLSGRGRIISRVVVHDTPTSSLIPEQPFN
                     VAAIALDEEPEVIMLSHLPGTPVDQVPIGAAVEVIFETTPATGQKVPEWRVVG"
     gene            567..>1462
                     /locus_tag="VFD73_27385"
     CDS             567..>1462
                     /locus_tag="VFD73_27385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77695.1"
                     /translation="MGLWEGRGKVVATGVGTSPTARRWDEKPETSMGAMTIIAIRKAI
                     ADAGISPDEIDGLVLTPDSTTGVSNDPNTPPPPGWEQHFKMASFPQAGITQGDIDWIL
                     LNMPELKNVKFMMNGNICMSVSFVAAAEAVARGLTKTCLVARGWHNLPGRYYVGVGAR
                     ALNTASGRGKYGSIWGLPACGSTAMIFEEYCRKYGKSHDQMANFVVTQRRNGLMNPDG
                     FYSQHRPEMITVEDYLTARWIAKPANIYDNDLPIMAALAVVYTTPERAKNHKQKPVYI
                     LSHGQTRPEYMGATPTLEQWEQ"
BASE COUNT          312 a          441 c          461 g          248 t
ORIGIN      
        1 aactggcaag catgcggaga atttcgtact ctggaagcga aaggcaggaa agacatggcc
       61 aaacagtccc cgatacccga tgagttggac aagccctttt acgacgcttg caaccaggaa
      121 cggctggtag cccagtattg caccaaatgc cttaggtatc agttcccgcc gcgaccagcc
      181 tgtacccgtt gtgggaacaa cgcctcggtg gagtggcggc agttgagcgg ccgtggccgg
      241 atcatcagcc gtgtggtggt gcatgacacc ccgacctcct cgctgattcc cgagcagccc
      301 ttcaacgtcg cggccatcgc gctggatgaa gagcccgagg tgatcatgtt gtcccatctc
      361 cccgggactc ccgtggatca ggtaccaatc ggggctgcgg tcgaggtgat ctttgagacg
      421 actcccgcga cgggccaaaa ggtgcccgaa tggcgggtgg taggctagac ccctttggca
      481 tggcagacac gacggcaacg cgaagcggga ggtaaactat ggcgcatccg ggagttcctc
      541 gcagttggtt ccgaaacaga gatggcatgg ggctctggga gggccgaggc aaggttgtag
      601 ctactggcgt cgggacgtcc cccaccgcgc ggcgctggga cgagaagccc gagaccagca
      661 tgggcgccat gaccatcatc gcgatccgga aggccatcgc ggacgccggg atttcgccgg
      721 acgagatcga cgggctggtt ctgacccccg actccacgac cggggtttcc aacgatccga
      781 acactcctcc gcccccgggc tgggagcagc acttcaaaat ggcgtctttc ccccaggccg
      841 gcattactca aggagacatt gactggatcc ttttgaacat gccggagctg aagaacgtca
      901 agttcatgat gaacggcaac atttgtatgt ccgtttcctt tgtcgccgcg gcggaggcgg
      961 tggcacgagg attgaccaag acctgcctgg tggcccgggg ctggcacaac ctgcccggcc
     1021 gctattatgt gggcgtaggg gccagggcgt tgaacacggc ctctggtagg ggcaagtacg
     1081 gcagcatctg gggtttgccg gcttgcggat ccacggccat gatcttcgag gagtactgcc
     1141 ggaagtacgg caagagccac gatcagatgg ccaacttcgt ggtgacccag cgccggaacg
     1201 gcctcatgaa tccggacggg ttctatagcc agcaccggcc ggagatgata accgtcgaag
     1261 actacctcac agcgcgatgg atcgccaagc cggcgaacat ctacgacaac gacctgccga
     1321 tcatggccgc cctggccgtg gtctacacca ccccggagcg ggccaaaaac cacaagcaga
     1381 agcccgttta catcctgagc catggccaga cccggcccga atacatgggc gccacgccca
     1441 ccctggagca gtgggaacag ag
//
LOCUS       DASRPQ010002434         1146 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1229826, whole genome shotgun sequence.
ACCESSION   DASRPQ010002434 DASRPQ010000000
VERSION     DASRPQ010002434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1229826"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..988
                     /locus_tag="VFD73_27390"
     CDS             <1..988
                     /locus_tag="VFD73_27390"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HZI77696.1"
                     /translation="HPTSPPGHAYRAAGRLLSGRAPVTLHTSFSVGRLRCHALEGGRQ
                     RLDGGAMFGVVPRTLWKTRIEPDERNRIPLAMRCLLIEHPDGLVLIDTALGNKEDAKF
                     LDIYGVENQGLEGATQLEDALASAGYLPRDVNWVVNTHLHFDHAGGNTTMDPELENDP
                     RRHIRPTFPAATYVVQRGELEFARHTNERTRASYLPHNFDPVSAAGRWQLLEGDQEIL
                     PGISVRLTPGHVPYHQAIIIQNGGETAVFVGDLFPTTAHLPLAWIMGYDLEPLRTLES
                     KRSLLADAVRGEWRLIFEHDANVISGIPVEAGKRIELGQVVPAPSATAQVSG"
BASE COUNT          202 a          353 c          385 g          206 t
ORIGIN      
        1 gcacccgacg tcgccgccgg gccatgccta ccgagccgcg ggaagactcc tgtccggaag
       61 agctccagtg acgctgcaca cttcattctc cgttggccgg ctccgctgcc acgcgctgga
      121 gggcggccgg cagcggctcg atgggggggc gatgttcggc gtggtgcctc gaacattgtg
      181 gaagacgcgg atcgagccgg atgagcgcaa tcgaattccc ctggcgatgc gctgcctgtt
      241 gatcgaacat cccgatggcc tggtgctcat agatacggca ttgggcaaca aggaagacgc
      301 gaagttcctc gatatctacg gggtcgagaa tcagggcctg gaaggagcca cccaactgga
      361 ggacgcgctt gcgtcggcgg ggtacctgcc gcgcgacgtg aactgggtgg tcaatactca
      421 tcttcacttc gaccacgccg gcggcaacac cacgatggac cccgagctag agaacgaccc
      481 gcgacggcac attcgtccga cctttccggc ggcgacgtac gtggtgcagc gaggagagct
      541 ggagtttgcc cgccatacca acgaacggac tcgagcgagc tatctgcctc acaacttcga
      601 tccggtctcc gcggctggtc gctggcagct gctcgagggc gatcaggaga ttctgccggg
      661 catttcagta cggctgaccc cgggccacgt tccctatcac caggcgatca tcatccagaa
      721 cggcggagag accgcggtgt ttgtgggaga tctgttcccg accaccgctc acctgccgct
      781 ggcctggatc atggggtacg acctcgagcc gctgcgtacg ctggagagca aacggtcgct
      841 gctcgcggac gcggttcggg gtgaatggcg gctcatcttc gagcacgacg ccaatgtgat
      901 cagtgggatt ccggttgaag cagggaagcg gatcgagctc ggccaagtgg taccggcgcc
      961 gtcagcaacc gcgcaagtct ctggttgaca gtgactagac cggtgagtag cttcctcgcc
     1021 gtgcgaagtg gggagctggt tttcccccac cctgagcctg ccggcccgat gccgcagcgc
     1081 ggctgggtcc tggcgctgga gtcatgcggt ggtcgtggta ccgccgtgtt tcggtcgtgg
     1141 gcaccc
//
LOCUS       DASRPQ010002435         1033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2481536, whole genome shotgun sequence.
ACCESSION   DASRPQ010002435 DASRPQ010000000
VERSION     DASRPQ010002435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2481536"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..514)
                     /locus_tag="VFD73_27395"
     CDS             complement(<1..514)
                     /locus_tag="VFD73_27395"
                     /inference="COORDINATES: protein motif:HMM:NF040183.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Scr1 family TA system antitoxin-like
                     transcriptional regulator"
                     /protein_id="HZI77697.1"
                     /translation="MAEATGWARSKVSKIENGKQAPTADDIRAWVEATNHPEVADELI
                     AMLRQVQEAHTRWRRRIREGGQASIQQELDELTRAAVRIRNLQVAIIPGLLQTGAYAR
                     GIAAQVSSVYGNVDIDAAVAARIKRQEILYEPDRQFEFVFAEAALHMPPCPRTAMLGQ
                     LDRLMALDLAN"
     gene            complement(616..>1033)
                     /locus_tag="VFD73_27400"
     CDS             complement(616..>1033)
                     /locus_tag="VFD73_27400"
                     /inference="COORDINATES: protein motif:HMM:NF045158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77698.1"
                     /translation="AAVEHWQQGNRMVPWEWPEWRSWLDLAWRHTNAGASISRVRLVD
                     EPPTSYQQWALECTPWHERSGDRIRYLSRHEAGRLGIPVENWWLFDTTTVVELTYGSG
                     EVPVKTLVTKPAKIRDYRAWSELALTHASTAETIAA"
BASE COUNT          172 a          329 c          324 g          208 t
ORIGIN      
        1 tgtttgccaa gtccagcgcc atgagacggt ccagctggcc gagcatggcc gtgcgagggc
       61 acggaggcat gtgaagggct gcctcggcga acacgaactc gaactgccta tcgggttcgt
      121 aaaggatctc ttggcgcttg atcctcgccg ctactgcagc atcgatatcg acgttcccat
      181 agaccgatga cacctgggcc gcgatgccac gggcatatgc gcccgtctga agcaatcccg
      241 ggatgatcgc aacctggaga ttcctgatgc ggaccgccgc ccgggtgagc tcgtcaagct
      301 cctgctggat cgacgcctga ccaccttctc ggatccgccg ccgccagcgg gtgtgagctt
      361 cctgaacctg gcggagcatc gcgatcagct cgtctgctac ctcaggatga tttgtcgcct
      421 cgacccatgc gcggatgtcg tcggcagtag gggcttgctt gccgttttcg atcttggaga
      481 ctttcgagcg tgcccagcca gtggcctcgg ccaattcggt ggctttgagc ccagcggcag
      541 accgcagacc tgcaaggcgc tctgcaagcc ctccgggggc cgttagagct tcactggctg
      601 ggcgcactcg tcctcctatg cggcgatggt ctccgctgta gaagcatggg tgagcgccaa
      661 ctcagaccat gctcggtaat cgcggatttt tgcgggcttg gtgaccaggg ttttgacggg
      721 cacctcacca ctgccgtagg tcagctctac gacagtagtg gtgtcgaaca gccaccagtt
      781 ctccacgggg atgccgagcc gccccgcttc gtggcgagac aggtagcgga tgcggtcacc
      841 tgatcgctcg tgccatggtg tgcactcaag cgcccactgc tggtaagagg tcggtggctc
      901 gtcgaccagg cgcacacggc tgatgctggc gcctgcgttg gtatgacgcc acgctaggtc
      961 gagccaactc cgccattctg gccactccca cgggaccatg cggttgccct gctgccagtg
     1021 ctcgaccgct gcc
//
LOCUS       DASRPQ010002436         1131 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4361976, whole genome shotgun sequence.
ACCESSION   DASRPQ010002436 DASRPQ010000000
VERSION     DASRPQ010002436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4361976"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            210..>1131
                     /locus_tag="VFD73_27405"
     CDS             210..>1131
                     /locus_tag="VFD73_27405"
                     /inference="COORDINATES: protein motif:HMM:NF014868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide reductase N-terminal alpha
                     domain-containing protein"
                     /protein_id="HZI77699.1"
                     /translation="MFDVVQVRSGARVVIDPSRDARLTVFGKATLSDRYLLPNESYQE
                     MFARVASAYADDDGHAQRLYDYMSQLWFMPSTPILSNGGTKRGLPISCFLNEASDSLE
                     GIVGLWNENVWLASKGGGIGSYWGNLRSIGEKVGAVGKTSGVIPFIRVMDSLTLAISQ
                     GSLRRGSAAVYLPVWHPEIEEFIEIRRPTGGDPNRKALNLHHGIQVPDAFMRAVENDE
                     PWPLLSPKDHSVVRSISARSLWIRILTARIETGEPYLVFSDHVNNARPEHHKLAGLEV
                     KTSNLCSEITLPTGEDHLGRQRTAVCCLASL"
BASE COUNT          214 a          348 c          348 g          221 t
ORIGIN      
        1 ctggaaggat attttttatc gatatttcaa tgttttaggt gcccattcct cagattcaca
       61 accggggtaa aaatttggcg atgacatgtc ttttgggggg cgtatcatca agccataggg
      121 gctcagccag tagccctccc aacatctagg tgtcttccac agtctgttcc atccacagct
      181 gtggacaaaa gcaaaaatgg gggccgcaag tgtttgatgt cgttcaagtt cgcagtggtg
      241 cacgggttgt tatcgatccc tcccgggacg cccggctcac cgtcttcggc aaagccaccc
      301 tctccgaccg ttacctgctc cccaatgaga gctatcagga gatgttcgcc cgcgtcgcct
      361 cggcctatgc cgacgacgat ggccatgccc agaggctgta cgactacatg agccaactgt
      421 ggttcatgcc ctcgacgccg atcctctcga atggcggcac gaagcgcgga ctgccgatct
      481 cctgcttcct gaacgaggca tcggacagcc tggaggggat cgtcgggctg tggaacgaga
      541 atgtctggct ggcctccaag ggcggcggca tcggctcgta ctggggcaac ctgcgctcca
      601 tcggcgaaaa agtcggcgcg gtgggcaaga cctcgggcgt gatcccgttc atccgggtga
      661 tggacagcct gacgctggcg atcagccagg gctcgctgcg gcgcgggtcc gcggcggtgt
      721 acctgccggt ctggcatccc gagatcgagg aattcatcga aatccgccgc cccaccggtg
      781 gcgacccgaa ccgcaaggcg ctgaacctgc atcacggcat ccaggtcccc gatgccttca
      841 tgcgcgcggt ggagaacgac gagccctggc cgctgctgtc accgaaggac cattcggtgg
      901 tgcggtcgat ttcggcgcgg tccctgtgga tccgcatcct gacggcgcgg atcgagaccg
      961 gggagccgta cctggtgttc tccgaccacg tcaacaatgc gcgaccggaa catcataagc
     1021 tggcggggct ggaggtgaag acttccaacc tgtgcagcga gatcaccttg ccgacgggcg
     1081 aggaccacct tggccggcaa cgcaccgccg tgtgctgcct tgccagcctg a
//
LOCUS       DASRPQ010002437         1843 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4690789, whole genome shotgun sequence.
ACCESSION   DASRPQ010002437 DASRPQ010000000
VERSION     DASRPQ010002437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4690789"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(193..1290)
                     /locus_tag="VFD73_27410"
     CDS             complement(193..1290)
                     /locus_tag="VFD73_27410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZI77700.1"
                     /translation="MAAMTSSSPALLQLARRLRELREQQWPNYRLTQAALAAAFGDVA
                     PATVSSWERTDATKLAPAARLSTYAQFFATRRSIEGKAPQLVPLDTFTDEERATYEAL
                     EIELRALRAEASRPTNRTEITARRSWHFPDSGPLTIVCAQLPTDQTSSFADPADANYT
                     ELQSFADLDALVELHGHVRAENPHMEVFFKAAPKVVADDLSGHVVLLGGIAWNEVTLR
                     LSEMTVLPVRQVPDPAVDTGEIFAVDDGKRTFLPKWRAGSRTIEVDGESREESLKTLT
                     EDVGLLARTPNPLNSNRVLVICNGVHSRGVLGAVRTLTDARLRESNERYIAEKFVGSD
                     SFAILMRVPVIEAKAMTPDFNAAGSVLYQWP"
BASE COUNT          371 a          552 c          578 g          342 t
ORIGIN      
        1 cgagattgtc ggccgtcctg gatgccggca cgatgatggc atctggtccc gtgcgggtgg
       61 cacgccagct gccccgggcg gggcggccaa ccagctgacg atgggtctcg tgctgccgta
      121 tagccgacag aatgcgacgg gccacatatg cctctctcgg gaaagtgccg aacgggattt
      181 acgagccaaa actcaaggcc actgatatag cacggatccg gcggcgttga agtccggggt
      241 catcgccttg gcctctatca cgggtacacg catcaagata gcgaacgaat ccgagccgac
      301 gaatttctcc gctatgtagc gttcgttgga ttcccgcagc cgcgcatcgg tgagggtacg
      361 gaccgcacct aggacgccgc ggctgtgcac tccgttacaa ataaccagga cacgattgga
      421 gttaagcggg ttcggggtac gggccagcag cccgacgtcc tcggtcagtg tcttgagtga
      481 ttcctcacgc gactcaccat cgacttcaat cgtgcgagac cccgcacgcc atttgggcag
      541 gaacgtgcgc ttgccatcgt caaccgcgaa gatctcgccc gtgtcgacgg ccggatcagg
      601 cacctgcctt accggcagta ccgtcatttc ggacagtcgc agcgtcacct cgttccaggc
      661 gattccgccc agcagtacca cgtggccaga cagatcgtcc gcgacgacct tcggcgcggc
      721 tttgaagaac acttccatat gtggattttc ggcccggaca tgaccatgca gttccacgag
      781 cgcatccagg tcggcgaaag actgcagttc cgtataattg gcatccgccg gatcagcaaa
      841 tgagctggtc tggtcggtag ggagctgtgc gcatactatg gtgagtggcc cggagtctgg
      901 aaaatgccat gaccgccgcg ccgttatttc tgttctgttg gtgggcctgc tagcttcggc
      961 tcgcagcgca cgcagttcaa tctcgagtgc ctcgtaggtg gcccgctcct cgtcagtgaa
     1021 agtgtcgagg ggcacaagct ggggagcttt cccctcgatc gaccggcggg tcgcgaagaa
     1081 ctgagcgtag gtacttaggc gcgcggcggg cgcgagcttg gtggcgtccg tcctctccca
     1141 ggacgacacc gtggccgggg caacatcgcc gaaggccgct gccagcgctg cctgcgtcaa
     1201 gcgatagttc ggccactgct gctcacggag ttcgcgaaga cggcgggcaa gttgcagtag
     1261 cgccggagag ctagaggtca tggctgccac cttccgggat gtgtcccgac tgtgcctacc
     1321 gtcggcgagg tagtcaccat acggcggatc tggtcatcct atggtattgc aggtactgct
     1381 tcgccgttct acagtagaaa tgagatcaca atatgagtac taagggtaca atactgtata
     1441 gacggtacag aagatagagt ccagtagagg gacgtacgga ccagaatcta gcgatagagc
     1501 atagcgtaga ggtgtaactg tgtcccggaa cacggcggtg tccgcgaagc aatctgacgc
     1561 tgatgcccac gtcggctggg atatcaagac gaccgccagg tcagcatggc ggctccgggc
     1621 gaccagccca cgaggctccc actgtccacg ccacggcggg gggtcctaca ggagagaccg
     1681 gccgcgggcc cctccggcca taaaaatgct gggccagctg ccaccggccc agcgatgtgc
     1741 gaccacaccg taattgatcg tgatgacgat gctagcaagc tcgcggcttc acgtcagccc
     1801 cgggctcaac gagcgctgag gcaacacctc agcgccggcg gca
//
LOCUS       DASRPQ010002438         1640 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4058330, whole genome shotgun sequence.
ACCESSION   DASRPQ010002438 DASRPQ010000000
VERSION     DASRPQ010002438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1640
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4058330"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VFD73_27415"
     CDS             complement(<1..279)
                     /locus_tag="VFD73_27415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77701.1"
                     /translation="MEENGEQTTLFTQTDVLPPGFRYQPELLGPEEEQHLLDEIRQLP
                     FKEFLFQGFVGKRRVVSYGWQYDFNERALRQAQEIPAFLLPLREAAASF"
     gene            complement(300..1145)
                     /locus_tag="VFD73_27420"
     CDS             complement(300..1145)
                     /locus_tag="VFD73_27420"
                     /inference="COORDINATES: protein motif:HMM:NF018963.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase-like
                     domain-containing protein"
                     /protein_id="HZI77702.1"
                     /translation="MPGTRRWDWTHDPDQQRLQDWSGTLRGEHITGDQGSLGAAAART
                     GELASGSPYQAGTLDAYLRHGGNPRSEPLTLSLTRFDCVTLVESCLAVGRAARTPGHV
                     SWDRFGREVERMRYRNGQRRGYSSRLHYFSEWISDGQSRGLVSNIARDLGGVADDRPL
                     RFMTTHRESYPALSDARMYSEIAAMERSLDQRPRFVVPTKCIPSVSDRIQTGDVLGFA
                     TEIPGLDATHTALAHRAKDGVLRVLHAPLSGGVVQVTSSTLAEYVAAIRHATGILLAR
                     PVYGS"
BASE COUNT          313 a          505 c          523 g          299 t
ORIGIN      
        1 gaagctcgcg gcagcttccc tcagcggaag caagaatgcc gggatctcct gtgcctgccg
       61 aagtgcccgc tcattgaagt cgtattgcca cccataggac acgacgcggc gtttgccgac
      121 aaatccctga aacagaaatt ccttgaaggg cagctgccgg atctcgtcca agaggtgctg
      181 ctcttcttca ggaccgagga gctccggctg atagcggaac cctggcggga gcacatcagt
      241 ctgggtgaac aaggttgtct gttctccgtt ctcctccacg cggtatcctt tgctctggat
      301 taggatccat agaccgggcg agccagcaga atgccggtgg cgtgccgaat ggccgccacg
      361 tattcggcga gcgtgctgct ggtgacctgt acgacaccac cagatagcgg agcatgaagc
      421 acgcggagaa ccccatcctt tgctcggtgc gccaaggcgg tgtgggtggc atcgaggccg
      481 gggatctcag ttgcgaagcc gagcacatcg ccggtctgaa tacggtcact gacggagggg
      541 atgcacttcg tcgggaccac gaaacgtggg cgctggtcca gggagcgctc catcgccgcg
      601 atctcagaat acatccgggc atctgacagc gctggatagc tttcccggtg tgtggtcatg
      661 aaccgaaggg gccgatcatc ggccaccccg ccgagatcgc gagcgatgtt gcttaccagc
      721 ccacggcttt gcccatcgct gatccactcg ctgaagtagt gaagcctgga gctatatccg
      781 cgtcgttgac cgttgcggta acgcatccgt tcgacctccc ggccgaaccg gtcccagctg
      841 acgtgtcctg gagttctggc cgctcggccc accgctagac acgactccac cagcgtcacg
      901 cagtcgaagc gggtgagcga caacgtcaac ggctccgaac gcggatttcc gccgtgtcgc
      961 agataggcat cgagggttcc tgcctggtaa ggagacccgc tggcgagctc accggtgcgc
     1021 gcggctgcgg ctccgaggga cccttgatct ccagtgatgt gctccccgcg gagcgtgccc
     1081 gaccagtcct gaagtcgctg ctggtcgggg tcgtgggtcc agtcccaccg ccgtgtacca
     1141 ggcaaaaccc atgcggccgc gctcaagagc gtcgcgtgaa cccactctcg gcgagagagc
     1201 gtagcaggtg ggacaggcat acccgaaata tgctcagacc gaagcctggc cgccgagagc
     1261 agagggcagc ctactatcag ccgaggtgtc tctgtgcccc gaacgcaggt gacaccctgg
     1321 cctgcggctg aggtcgacgt cttgccaact cccagcctcc cggaaacggg tattgtcatg
     1381 caagacaatg ggttccgccc ctggtgcaag ttttggcctg acagttgctc actaccccgc
     1441 gccggacggc tcgtggagac cgtggcgggc gtgctggagg tcacatctcc tgttctaacc
     1501 acgcagtatg gtcaccggca gccgtcaggg atgtcgccga gggggcgacg caacgagatc
     1561 acggggtaca gaggaggttg taatgaacga acgagcatgc cgggccatga ccgccggagg
     1621 atttgcgctg gctctggtta
//
LOCUS       DASRPQ010002439         1285 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2482920, whole genome shotgun sequence.
ACCESSION   DASRPQ010002439 DASRPQ010000000
VERSION     DASRPQ010002439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2482920"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..716)
                     /locus_tag="VFD73_27425"
     CDS             complement(<1..716)
                     /locus_tag="VFD73_27425"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HZI77703.1"
                     /translation="MIHRLSLWFLVLSLSTACAHPQAASSGSTGAAPSAAAVPRLIST
                     DDLASWQKDRTLTLIDVRTDVFTYLKGHLPGAEYLNPETLRASEGGIPTQLLSGRMYG
                     ELFGRLGIAMDRAVVIYSAGETRNIDATFLAWLLAAFGHQQVYVLNGGYFKWELEQRS
                     IRQEYPVIKAVDFPSSGFHPERASLDDVRHVLQQHDGILVDARPPEQYSGQAGAQIRR
                     GHIPGAISHYWQDDLTQEGFG"
     gene            complement(713..>1285)
                     /locus_tag="VFD73_27430"
     CDS             complement(713..>1285)
                     /locus_tag="VFD73_27430"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HZI77704.1"
                     /translation="DAGEDALIADWVRVVGLDAMRGFEFADTPDRPVTGTDTLQLGDK
                     TLVITHPGAAHTAGDLMVWLPHERVLFAGDILVEDGVTMVVDGDSGELLKALAMIDRL
                     QPSVAVPGHGAIPRTPAALVAGTRSYFMGLRADMKAALEHGIPMGRALKSLPPADQTR
                     PVSYNSRRRRNAVRVYLEEERAYMGLDSAQ"
BASE COUNT          224 a          423 c          404 g          234 t
ORIGIN      
        1 ccaaagccct cctgcgtcaa gtcgtcctgc cagtagtgac tgatcgctcc cggaatatgt
       61 ccccggcgga tctgcgcccc tgcttgcccg gaatactgct cgggtggccg agcatcgacc
      121 aggatgccgt cgtgttgctg gaggacgtgt cgcacatcgt cgagtgaagc acgctcgggg
      181 tggaacccgc tggagggaaa gtcgaccgcc ttgatgaccg ggtactcctg ccggatggat
      241 cgctgttcca gctcccactt gaagtagccg ccgttcagca cgtacacctg ctggtgcccg
      301 aacgccgcca gcagccaggc caggaaggtg gcatcgatgt tcctggtctc acccgcgctg
      361 tagatcacga ctgctcggtc catggcaatg cccaggcggc cgaacagttc tccgtacatc
      421 cggccgctga gaagctgggt cggtatcccg ccctcgctgg ctcggagggt ctctggattc
      481 aggtattctg ccccaggcaa gtgacccttg agataggtga acacgtcggt tcggacgtcg
      541 atcagggtga gcgtccggtc cttttgccag ctcgcgaggt catcggtaga gatcaggcga
      601 ggtactgccg cggccgaggg cgctgcacct gtgctgccgc tggaggcggc ctgtgggtga
      661 gcacaggctg tactcagtga taggaccaga aaccacaggg acagccggtg gatcactggg
      721 ctgagtccag gcccatatag gccctctcct cctcgaggta cacccgcacc gcgttccgcc
      781 tccgtctgga attgtacgac accggcctgg tctggtccgc cggaggcagc gacttgagtg
      841 cgcgacccat gggaatcccg tgctccagcg ccgctttcat gtctgctcgg agtcccatga
      901 agtagctgcg ggtcccggca accagggcgg cgggagtcct gggaatcgct ccatgcccag
      961 ggaccgcgac gctcggctgg agacggtcga tcatcgcgag cgccttgagc agctctccag
     1021 aatcgccgtc caccaccatc gtcacgccat cctccaccag aatgtctccc gcgaacaaaa
     1081 cccgctcgtg cgggagccac accatcaggt ccccggcggt atgggccgcg ccgggatgag
     1141 ttatcaccaa ggtcttgtcg ccgagctgca gggtgtcggt cccggtgacc ggacggtcgg
     1201 gcgtgtcggc aaactcgaag ccacgcatcg cgtcgagtcc cacgactcga acccagtccg
     1261 caatgagcgc gtcttcccca gcatc
//
LOCUS       DASRPQ010002440         1068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_923588, whole genome shotgun sequence.
ACCESSION   DASRPQ010002440 DASRPQ010000000
VERSION     DASRPQ010002440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_923588"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1056)
                     /locus_tag="VFD73_27435"
     CDS             complement(<1..1056)
                     /locus_tag="VFD73_27435"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HZI77705.1"
                     /translation="MKQQVDVFFHSQQPYTSVQDADLAQYPSGRLDFPNRYFDPAQAH
                     ALYNQYHEQYAWADEVGLDGIMTNEHHAAYWNMKPSANLDAAVISKVTRNARIAILGN
                     ILPISDPVRMAEELAMLDCYSGGRLISGFVRGGAVETLHAGLDPTENRARFEEAHDLI
                     LQCWTTPGPFRWEGRYYPHRVVNPWVLPMQKPHPPIWFPGGSSPESVVWAARHRYTYI
                     NLGALMDLTRELKQVYIDTAQEAGFTPGPEHFGYQVRALVADTDAQTQAIGRGFLWNA
                     HHRMRGPSEHNDPPGYQSRVASALHQRRAGGPGQRMTYEGLQEVGALVVGSPDTVIRK
                     LTRTIEHLNPGYLILIGS"
BASE COUNT          183 a          345 c          340 g          200 t
ORIGIN      
        1 gctcccgatg aggatgagat agcccgggtt gaggtgctcg atggttctgg tcaacttccg
       61 aatgacggtg tcgggactcc cgaccacgag ggccccgacc tcttgcaggc cctcataggt
      121 catccgctgc cccggtcctc ccgcccgtcg ctggtgcagg gcactggcca cccgcgactg
      181 gtagccgggc gggtcgttgt gctcactggg gccccgcatc cggtgatgcg cattccacaa
      241 gaagccccgc ccaatcgcct gggtctgcgc gtcggtatcg gccaccaggg cccggacttg
      301 atacccaaag tgctcggggc ctggggtgaa ccccgcctcc tgcgccgtgt cgatatacac
      361 ctgctttaac tcgcgggtga gatccatcag cgcgcccagg ttgatatagg tgtagcggtg
      421 gcgcgccgcc cagaccacgc tttccgggct actgccgccg gggaaccaga tgggcgggtg
      481 cggtttttgc atcggcaaca cccagggatt gaccacccgg tgcgggtaat accgcccctc
      541 ccagcggaac gggcccgggg tcgtccagca ctggaggatc aggtcgtggg cctcttcaaa
      601 ccgcgcgcgg ttctcggtgg gatcgagacc cgcgtgcaag gtctccacgg cccccccacg
      661 gacaaaacct gagatgagcc gtcccccgga gtagcagtcc agcatcgcca gttcttccgc
      721 catccgcacc gggtcactga tcggcaagat gttgcccaga atggcaatgc gggcgttgcg
      781 tgtgaccttg ctgatgacgg cagcgtccag attcgcggag ggcttcatgt tccagtaggc
      841 cgcatggtgc tcattggtca tgatcccgtc gaggccgacc tcatccgccc aggcatactg
      901 ctcgtgatac tggttataca acgcatgcgc ctgtgctgga tcgaaatacc ggttgggaaa
      961 gtcgagacgc ccagaggggt actgggccag gtccgcatcc tgcacagacg tgtagggctg
     1021 ctgggagtga aagaagacgt ccacctgctg cttcatcagg gcctcctc
//
LOCUS       DASRPQ010002441         1305 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3113781, whole genome shotgun sequence.
ACCESSION   DASRPQ010002441 DASRPQ010000000
VERSION     DASRPQ010002441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3113781"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            544..969
                     /locus_tag="VFD73_27440"
     CDS             544..969
                     /locus_tag="VFD73_27440"
                     /inference="COORDINATES: protein motif:HMM:NF039700.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6247 family protein"
                     /protein_id="HZI77706.1"
                     /translation="MAPAELVAPGRAGWSGTCGARVLAGAAGRLGVTSERKLSHVTAQ
                     PTGDPADPLVILRDLPEREHEEFLRQYHQAVDAAYDPAGYQQLRRLLHVWSLTAIAAG
                     QPGYYEELAAARAGTATTVPVTDAIPDWAERAAAARDHR"
     gene            966..1214
                     /locus_tag="VFD73_27445"
     CDS             966..1214
                     /locus_tag="VFD73_27445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77707.1"
                     /translation="MTYRAELSGRALKQMHGLPGPAFDSLIEVMAEVIDYPDDPLRTF
                     PTGDPYVRRAEFGDAGLITYLINDATSKVIILDITWAG"
BASE COUNT          227 a          437 c          417 g          224 t
ORIGIN      
        1 cacaggccga ccgctcgggt gatctgccgg aagccgcacc tgacgttgtg ctgttcgagc
       61 atggtgccga tcgtcgtggc gaacaccagg cagctgcctt gccacaactc cccaccttga
      121 gatggtcggc accctgcgca ccccccgctc tcgcagcgcg gccagagcga tgtctggagg
      181 cttcagtgcc ggccgtggcc ggggccttgg tgtcgcctca atgggagcca gcgtgactgt
      241 cctgggagcg gtacgactct tcgcttggct ctccgtgagc cgaccggccg ccgagcatac
      301 cctctgacct agtgggcgca actgggttcg aaccagtggc ccctcgcttg taagacgtga
      361 cggagccgtc gcggaacatc gcgtggtgcc gcctgatgag ccagctatct ggactgttag
      421 tcgctgggcg tcgccctatg tcgcctggag tctggctctg ttggctcccc gcttggctcc
      481 ccgaaattcc gttagccctg ctaatcagaa atttaactgg attgcggacc ggaacaggcc
      541 aagatggcac cggcagagct ggtggctccc ggtcgggcgg gctggagcgg gacctgcggc
      601 gcccgcgtcc tagccggtgc ggcgggcagg ctaggcgtga ccagcgagcg taagctgagt
      661 cacgtgaccg cacagccgac gggagacccc gccgatccgc tggtgatcct gcgagacctc
      721 cccgaacgag agcacgagga gttcctccgc cagtaccacc aggcggtgga cgctgcgtac
      781 gaccccgccg gttaccagca gttgaggcgc cttctccacg tgtggagcct gaccgcgatc
      841 gccgccgggc agccgggcta ctacgaggag ctcgcggccg cccgcgcggg aacggccacg
      901 acagtgccgg tcaccgacgc gatcccggac tgggctgaac gagccgccgc ggccagggac
      961 caccggtgac ttatcgggcc gaactgagcg ggcgggctct gaagcagatg cacgggctac
     1021 cgggtccggc attcgacagc ctcatcgagg tcatggcaga agtgatcgac tatcccgacg
     1081 acccgctccg caccttcccg accggtgacc cttacgtcag gcgcgcagag ttcggcgacg
     1141 cgggactgat cacctattta ataaacgacg ccaccagcaa agtcatcatc ctcgacatca
     1201 cctgggctgg ctagcaattc ctgcacgtgc tacctgcatg tcagcacgga caggcgcaaa
     1261 ctggttagaa ccggtgtctc ctcgcttgta acccgacttt tatca
//
LOCUS       DASRPQ010002442         1091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2483794, whole genome shotgun sequence.
ACCESSION   DASRPQ010002442 DASRPQ010000000
VERSION     DASRPQ010002442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2483794"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..389)
                     /locus_tag="VFD73_27450"
     CDS             complement(<1..389)
                     /locus_tag="VFD73_27450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77708.1"
                     /translation="MTTFEPQLNSESEPLAWRDKKRRLWLMGLIAPTALFVMLPLIWA
                     LNRLGWHAAAQVPLWVGPILLWVLLPILDLRFGPDGQNPPGEVMEQLENDKYYRYCTY
                     IYVPFQYLSVIFGAYLFTASNLSWLGF"
     gene            complement(497..>1091)
                     /locus_tag="VFD73_27455"
     CDS             complement(497..>1091)
                     /locus_tag="VFD73_27455"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HZI77709.1"
                     /translation="GQANLATAFTANGIHWASKIISIGALAGLTTVVMVLMLGQCRVL
                     FAMARDGLLPRSLAKTGSHGTPVRITVVVAVVVAVTASIFPITKLEEMVNVGTLFAFV
                     LVSAGVMVLRRTRPDLERGFKAPWVPLLPIASIAACVWLMLNLTALTWVRFAVWLVVG
                     TAIYGGYGYRHSVLGRREEREPEKSEALEADPNSPVP"
BASE COUNT          217 a          358 c          344 g          172 t
ORIGIN      
        1 tcaaagccca gccagctcag gttcgacgcg gtgaacaggt aggcgccgaa gatcacgctc
       61 aggtattgga acgggacgta gatgtaggtg cagtagcggt agtacttgtc gttctccagc
      121 tgctccatga cctcgccggg cgggttctgc ccgtcgggtc cgaagcgcag gtcgaggatc
      181 ggcagcagga cccagagcag gatcggcccg acccacagcg gaacttgcgc ggcggcgtgc
      241 cagcccagcc ggttcagggc ccagatgagc ggaagcatca cgaacaacgc cgtcggggcg
      301 atcagcccca tcagccacag gcggcgcttc ttgtcccgcc aggccagcgg ctcggattcg
      361 gagttcagtt gcggttcgaa tgtggtcata tgccaaacct ccttgtgagt cataccacgt
      421 tgaggttgga caataccgag gtttgcgtct tctgtctaga caaaagacgc acacttgtaa
      481 aactgtcgag accgggctac ggcaccgggc tattagggtc ggcctccagc gcctcgctct
      541 tctcgggctc ccgttcctcg cgcctgccca gcaccgagtg ccggtagccg tagccgccgt
      601 agatggccgt gcccaccacc aaccagacgg cgaaccggac ccaggtgagg gccgtcaggt
      661 tgagcatcag ccacacacac gcggcaatgg atgcgatcgg aagcaacggc acccacggcg
      721 ctttgaaacc gcgctccaga tccgggcgcg tccggcgcag caccatcacg ccggctgaga
      781 ccaggacgaa ggcgaagagc gttccaacat tcaccatctc ctcgagcttg gtgatgggga
      841 aaatcgacgc cgtcacggcc accaccacgg cgaccaccac ggtgatacgc accggggtgc
      901 catgcgagcc ggtcttggcc agcgaccgtg gcagcagccc gtcgcgcgcc atggcgaaca
      961 ggacccggca ctggccgagc atcagcacca tcaccacggt ggtcaatccc gccagcgcgc
     1021 cgatggagat gatcttgctc gcccaatgga tgccgttcgc ggtgaaggcg gtggccaggt
     1081 tcgcctgccc g
//
LOCUS       DASRPQ010002443         1070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_305588, whole genome shotgun sequence.
ACCESSION   DASRPQ010002443 DASRPQ010000000
VERSION     DASRPQ010002443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_305588"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            278..>1070
                     /locus_tag="VFD73_27460"
     CDS             278..>1070
                     /locus_tag="VFD73_27460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77710.1"
                     /translation="MKTRLLASLPALALVFVVAIACVLAPLLPVCGTLIEAGGGCNKP
                     ILPDLSLSTRSLDELAARYVWGLSALAVFTVSLIGGIPAAVICLTGARAKWGLGLIAL
                     AAVTVLLLKAKLPSFAELVFSTLFLHPTVYKQIPHVETVGAAVDVTGACFIVIVTMAV
                     CKLLASVVDSGRTAPAEPAQVAAVIRALRTLLFSSSIVLIAGVVEVTALYGWGGAILN
                     ATIAEQKLTTSPSSSNAVHTNPPSGAAVESSYQAMAKSVPGAMGGI"
BASE COUNT          178 a          321 c          341 g          230 t
ORIGIN      
        1 aagtcgatca caccctgcca atcgttcgga cggtggaaac cgtcaccatg gagtggggaa
       61 ccccaatcgc cgtgcgtggc tgctcgagtg ctcgtgggag cggcgccgtg gttctcctcg
      121 tcttcgtccc cctagccggc ttcatgcacg tctcatagca ttactgccga tacgcacgcg
      181 gaaaagtcga gataggacat agagggaaat gtcgccgagg ttctcggcgc tatagtagct
      241 cgtggcatcc cgggcatccc tgggaggagg gcagcacgtg aagactcgac tgcttgcgtc
      301 gcttccggcc ctggcgctcg tctttgtggt tgccatcgcc tgcgtgctgg cgcctctgct
      361 ccccgtgtgc ggtactctga tcgaggccgg cggcgggtgc aacaagccca tcctgcctga
      421 cctgagcttg tcaacgcgat ctctcgatga acttgcagcc cggtatgtct gggggctttc
      481 ggccctggcg gtattcacgg tgagtctgat cggcggtatt ccggctgccg tcatttgcct
      541 gacaggagct cgggcaaagt gggggttggg tttgatagcc ttggcagcgg tcacggtgct
      601 gctgctgaaa gcgaagctcc ccagcttcgc cgagctggtg ttctccactc tctttcttca
      661 tcccaccgtg tacaagcaga ttccccatgt cgaaaccgtg ggagccgccg tcgacgtcac
      721 cggtgcgtgc ttcatcgtga tcgtcacgat ggccgtgtgc aagctgcttg cgtcggtcgt
      781 ggactcagga aggaccgcac cggcagaacc ggctcaggtg gcggcggtga tcagagcgct
      841 ccgtacgctg ctcttctcct cgtcgatcgt gctcattgcc ggggtggtgg aggttacggc
      901 gttgtatgga tggggcggag ccatactcaa cgccacaatc gctgagcaga agctgacgac
      961 ctcaccgtca tcctcgaacg ctgttcacac caacccgccc tcgggagcgg cagtcgagtc
     1021 atcataccag gcaatggcga aatcggtgcc gggcgcaatg ggcgggattg
//
LOCUS       DASRPQ010002444         1188 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1232429, whole genome shotgun sequence.
ACCESSION   DASRPQ010002444 DASRPQ010000000
VERSION     DASRPQ010002444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1232429"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..322)
                     /locus_tag="VFD73_27465"
     CDS             complement(<1..322)
                     /locus_tag="VFD73_27465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77711.1"
                     /translation="MYRWLAGLLMAGMMAGAAAVAPAAPASAGTVAPYYRIGMAPQGG
                     AFSLCLQGNLGGPLGSTVTQQNCNPDLTDASQLWLPISLGGNIYKFQNIGTGRCLEAR
                     NGAVN"
     gene            456..1133
                     /locus_tag="VFD73_27470"
     CDS             456..1133
                     /locus_tag="VFD73_27470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77712.1"
                     /translation="MIVREGDGAAMYVQKCIKGVNGIDLDRAKEMMQDEGLTCNWWRE
                     RTKIPRTGIALQEIGERLTHSNLYLHVNAYGAQHPDYAGLVFQETPFISLSAGNVTAP
                     VFSRTSTVWSAHQTALDFATGHGTYLGDCFLFHCWVIVGLRSAVGVRALAEEVRDLKT
                     YSQYSYYQGEGEIAAKIDVPPSQIEKFEHWRTTSTGLNQDPEFVDEWGNPGYIDPATV
                     VNLREAL"
BASE COUNT          230 a          358 c          400 g          200 t
ORIGIN      
        1 cgttgacggc gccgttgcgg gcttccaggc accggccggt gccgatgttc tggaacttgt
       61 agatgttgcc gcccagggaa atcggcagcc acagctggct cgcgtcggtg aggtccgggt
      121 tgcagttctg ctgggtaacg gtcgagccca aggggccgcc taggttgcct tgcaggcaca
      181 gcgagaacgc accgccctgg ggggccatcc cgatccggta gtaaggagca acggtgccgg
      241 cgctggcggg tgccgccggg gccactgcgg cggcacccgc catcatgccg gccatgagca
      301 ggccggcaag ccatcggtac atgcaccgag cttgccgcgc ggcgctgaag cggtgctgat
      361 gccaggctgg agcacgcgcg ctgaattact ttccggttgc gtttagggga acagcctcgt
      421 cgttcggcct attatggggc ttcaccggct aggggatgat cgtccgtgaa ggggatggcg
      481 cggcgatgta tgtgcagaaa tgcatcaagg gcgtgaacgg catcgacttg gaccgagcca
      541 aggagatgat gcaggacgaa ggcctgacct gcaactggtg gcgcgaaaga accaagatac
      601 cgaggaccgg aatagccctg caggaaattg gcgaacggct gacccacagt aacctctatc
      661 tgcacgtgaa tgcctacggt gcacagcatc ccgactacgc cgggcttgtc ttccaggaga
      721 cgccgttcat ctcgctgagc gcgggcaatg tcaccgcgcc cgtcttcagc cggacgagca
      781 cggtctggtc agctcatcag acggccctcg acttcgcgac cgggcatggc acctacctag
      841 gcgactgctt cctgtttcac tgctgggtca ttgtcggact gcggtcggcg gtgggggtgc
      901 gggcgctcgc ggaagaggtc cgggacctga agacctacag ccagtactcc tactaccagg
      961 gcgagggaga aatcgccgcc aaaatcgacg tgcccccgag ccagatcgag aagttcgagc
     1021 actggcggac gactagtacc ggactaaacc aggacccgga atttgtcgac gagtggggaa
     1081 acccgggcta tatcgacccg gccaccgtcg taaacctcag ggaagcgctc tagcatggcg
     1141 ctgcacaacc tatccgcagc gcgggatgcg ctcggcctcg acctggcg
//
LOCUS       DASRPQ010002445         1224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_924641, whole genome shotgun sequence.
ACCESSION   DASRPQ010002445 DASRPQ010000000
VERSION     DASRPQ010002445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_924641"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..181)
                     /locus_tag="VFD73_27475"
     CDS             complement(<1..181)
                     /locus_tag="VFD73_27475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77713.1"
                     /translation="MGCMMRDRVAVQQAGSQGNPAPGTKLRDNWLWETLLRSAGGWKL
                     LPKTLVFRYDSAPGGD"
     gene            207..>1224
                     /locus_tag="VFD73_27480"
     CDS             207..>1224
                     /locus_tag="VFD73_27480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase-like protein"
                     /protein_id="HZI77714.1"
                     /translation="MDILTSPRHTTNFVAKVRSAFPALERRHQGYPVAYFDGPGGTQV
                     PQSVVDAMADYLLHHNANTHWQYPTSAETDALIASSRRALADLLGAQPTEIAFGANMT
                     TLTFHLSRALGRSWGRGDTIVVTELDHHANIAPWRALERERGVTIATVPLIPRTGQLD
                     WERLEALLEARPKLLAIGAASNALGTVNDVRRASELARQHGAMTFVDAVHYVPHHLTD
                     VRALGCDFLACSAYKFCGPHIGVLFAREEILQQLDVPKLAPAPNTAPERIETGTLNHE
                     AIVGAAAAVDFCASLSQGSTRRDRLVQTYQEFHVRGRALGERLWFGLQAIRGVTLYGP
                     APDLP"
BASE COUNT          221 a          424 c          366 g          213 t
ORIGIN      
        1 agtcgccccc gggtgccgaa tcatagcgga aaacgagggt ttttggaagc agcttccacc
       61 cgcctgcact gcgtagcaac gtttcccaca accagttatc ccggagtttg gttccgggag
      121 ccgggttccc ctggctcccc gcttgctgaa ccgcaacccg atcccgcatc atacagccca
      181 ttcggcaacc cttcaccgga tcggcaatgg acatcctcac cagcccgcgc cacaccacca
      241 acttcgtcgc gaaggtgcgg tccgcattcc ccgcgcttga gcgccgccac cagggatacc
      301 ccgtagccta cttcgacggg cccggtggaa cccaggtgcc gcagtctgtg gtcgacgcga
      361 tggcggacta cctgctgcac cacaacgcca acacgcactg gcagtatccc accagcgcgg
      421 aaaccgatgc gctcattgcg tcctctcgcc gagcgctggc cgatctgttg ggtgcccaac
      481 ccaccgagat cgccttcggc gccaacatga cgacgctcac attccatctc tcccgggcgc
      541 tgggccggag ctgggggcgg ggtgacacca tcgtggtgac cgaactggat caccacgcga
      601 acattgcacc ctggcgggca ttggaacggg aacgcggcgt caccatagcg acggtgccgc
      661 tcattccccg aacgggccaa ctggactggg agcgattgga ggcgctgctc gaagcgcgcc
      721 cgaagctact ggccattggg gccgcctcga acgcgctggg taccgtcaat gatgtccgcc
      781 gagcgagcga gctggcacgt cagcacggag ccatgacctt cgtggacgcg gtgcactacg
      841 tgccgcatca cctcaccgac gtgcgggcgc tggggtgtga tttcctcgcc tgctcggcat
      901 acaagttctg cggtccccat atcggggtgc tctttgcgcg cgaagaaatt ctgcaacagc
      961 tcgatgtgcc caagctcgca ccggctccga acacggcgcc cgagcgaatc gagactggaa
     1021 cactgaacca cgaggcaatc gttggtgcag ccgcggccgt ggacttctgt gcctctctca
     1081 gccaaggaag cacccggcga gaccgactgg tgcagactta tcaggaattc catgtccgcg
     1141 ggcgcgctct cggcgagcgg ctctggttcg gtctccaggc gattcggggt gtgacgctct
     1201 acgggcctgc tcctgacctc cctc
//
LOCUS       DASRPQ010002446         1233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4060109, whole genome shotgun sequence.
ACCESSION   DASRPQ010002446 DASRPQ010000000
VERSION     DASRPQ010002446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4060109"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..950)
                     /locus_tag="VFD73_27485"
     CDS             complement(<1..950)
                     /locus_tag="VFD73_27485"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HZI77715.1"
                     /translation="MTTYAVVGTPVTREDGPEKVSGQTCYAGDLMLPGMLWGKVLRSP
                     LPHARIVHIDTAGASKLPGVHAVLTGRDLAGMLVGRTLRDTPLLAQEKVRFVGEKVAA
                     VAADDVDTAEEALTLIEVEYAELPAIFDPVQAMQPEAPVVHDGAPTYEGPAGPVQPRG
                     NISHHQTWSGGDVEQGFRESDLLFEHTFTTPWVHQGYMEPYACIVAIDAAGRIQVWAN
                     NKQPFRLRWQLASALGVPEDRIRVNPCAIGGDFGGKAGAMDVPLAYALAQRVGRPVKM
                     IMHYVEELMAGNPRHPSVITIKTGVKQDGQLWARHTRVVY"
BASE COUNT          201 a          421 c          387 g          224 t
ORIGIN      
        1 ttgtagacca cccgggtgtg ccgggcccac agctggccat cctgtttcac cccggtcttg
       61 atggtgatga ccgaaggatg cctggggttg cccgccatga gttcctcgac gtagtgcatg
      121 atcatcttca ccggccggcc gacccgctgg gccagcgcat aggcgagcgg cacgtccatg
      181 gcgccggctt tgccgccaaa gtcgccccca atggcgcagg ggttgacccg gatgcggtcc
      241 tcaggcactc ccagcgcact ggccagttgc caccgcaggc gaaacggctg cttgttgttc
      301 gcccacacct ggatgcggcc cgccgcatcg atggccacga tgcaggcgta gggctccatg
      361 tagccctggt gtacccaggg ggtggtgaag gtgtgctcaa agagcaggtc cgattcgcgg
      421 aacccctgct cgacatcgcc gccggaccac gtttggtggt gactgatatt gccacggggc
      481 tggaccggtc cggctgggcc ctcgtaggtc ggggcgccgt catggacgac cggcgcctcg
      541 ggctgcatcg cctgcaccgg gtcgaagatg gcgggcagct ctgcatactc cacctcgatg
      601 agggtgaggg cctcttcggc cgtgtccaca tcgtccgccg ccaccgccgc cactttctcg
      661 cccacaaacc gcactttctc ctgggccagc aagggcgtat cgcgcaacgt ccggccgacc
      721 aacatgccgg cgagatcacg gccggtgagc acggcatgaa cgccgggcaa cttcgacgcg
      781 cctgcggtat cgatatggac gatgcgggcg tggggcaacg ggctgcgtag caccttcccc
      841 cagagcatcc ctggcagcat cagatccccg gcgtagcacg tctgtcccga caccttctcg
      901 gggccatctt cgcgggttac cggtgtacca accacagcgt aggtcgtcat atccatccct
      961 cctctcgaca gtcatagtct gcacgtggag agcagagcgt catgcggcgc tcttgcctta
     1021 gagaaaatag ggtgttgtgc gcttcacgag cggtatctct ccccgtccag gggcagagtg
     1081 tcctttccgc accgaagaac ctctgctggt gccacgtggc atggcacgtc tgctggcggc
     1141 gagccgttgg cacccgtcac gcggccagcg ccgccaccag ctctgcggca ctgaccaccg
     1201 tggcttgccg cgggaacacc ttctccatca gca
//
LOCUS       DASRPQ010002447         1839 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2485449, whole genome shotgun sequence.
ACCESSION   DASRPQ010002447 DASRPQ010000000
VERSION     DASRPQ010002447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2485449"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..198
                     /locus_tag="VFD73_27490"
     CDS             <1..198
                     /locus_tag="VFD73_27490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77716.1"
                     /translation="RALDEAVDIHVGSLLQSTLVPERNDSSRFNVPMTAARREEHLGH
                     TNGMSTSRPTGTPPCQWPCQC"
     gene            complement(310..717)
                     /locus_tag="VFD73_27495"
     CDS             complement(310..717)
                     /locus_tag="VFD73_27495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidB family protein"
                     /protein_id="HZI77717.1"
                     /translation="MSLLDKVAGQLGGALGGGPQSALLTGLTEMLGKGGSGGGLSGLV
                     QAFQAKGLGDIVASWVGTGSNLPVSPAQIQEGLGEANLQEIAQKAGLSPEAASSKLAE
                     ILPATVDTLTPEGKLPEAGGLAQALGLLKGRLG"
BASE COUNT          297 a          637 c          578 g          327 t
ORIGIN      
        1 cgcgctctgg acgaagccgt ggatatccat gtcggcagtc tccttcagtc gacgttagtt
       61 cctgaacgca atgactcgtc tcgcttcaac gtgcccatga ccgctgcgcg tcgcgaggaa
      121 cacctgggcc acacgaacgg catgagcacg tcgcgcccga cagggacacc gccttgccaa
      181 tggccgtgcc aatgctgacg gccatcgcct gggcgaagcg cattcgtctt gcggcggaaa
      241 cgcaacaact cgcgttcaac ggggctactt cgtctcggcg ggcgatctga ccccgtcgat
      301 ccggtcgccc tatccgagtc ggcccttgag caagcccagt gcctgcgcga gcccgccggc
      361 ctccggcagc ttcccctctg gagtcagcgt gtcgacggtg gccggcagga tctcggcgag
      421 cttggagctg gccgcctccg gcgaaaggcc ggccttctgc gcgatctcct gaagattggc
      481 ctccccgagc ccctcctgga tctgggccgg cgagacaggc agattggaac ccgtgcccac
      541 ccacgaagcg acgatgtcgc ccaggccctt ggcctggaag gcctggacca gacccgacaa
      601 gccgccgccc gagcctccct tgccgagcat ctccgtcaaa ccggtaagga gtgcagattg
      661 cgggcctcct cccaacgcgc caccgagctg cccggcgacc ttatcgagta gactcatcgc
      721 tggcctccct ctcagttgat gttatgtacc cgacgcgatc taccgcgtca gcccccgccg
      781 cgtgtcgcgg cttcatgcct ctctcctcat cccgcggcgc gcagggggaa gggcgaccct
      841 tccccccgcc caacaacgcg ccgagtgcga tgaagcgccc tgctgtggac gccaggttgt
      901 gactcattga gtggtcccct agagagtggc ccccctagac ttccccgaaa tgcgcagcaa
      961 cgagcgtctg tccggctcca gtctcctccc cagacgttcg aagaccagtg gaccttggtc
     1021 ctagtcaatc tggggcattc tctcggcgcc ctgcattgcc gtccgattgg gcgggttcag
     1081 aaggacatgc tctcccacgt gatggcggct tctgccgcac ggccgtcgag gtgaccaaca
     1141 agaccgtcag gatcgatcgg cggcccgaaa cctgcagcgc ccgtcgacca gacaggcggg
     1201 gcgcggagat ccgtcggctc ccggggctgg taccactagg ccctccgccg gactgcaaga
     1261 ccgacctgct caccgactgt ggtccagtcg agatgagcaa atggggccgt ttcccagtta
     1321 cggggttgct cgagctccgc gggcggcacg tcgcccaggg agctgtgtcg atgcgtggcg
     1381 gctgggggac gagtctcttg ttctgatgcc ctacccctgc ttcttcgtgg accacgtacc
     1441 gtggatggcc ggcgctatgc gcgtgaggcg ccacccggcg aagtaccgcc caggtagcca
     1501 cgcggccctt cgcttcgcca tgtggcgctt gcgcgtggcc tcgtagcacg cgataggtcc
     1561 ccctgcgctg ccctggagcg cagtgcagct cgagttgcaa tgccgcgagc gcggacaccg
     1621 agctcatgcc ctactcccac gtcctctctg tgggaccaag gtcgcattgc gggacagggc
     1681 gtcccggtga gatacgtgcc tccggaggct catatgctga ctaagagcga cttcaccgca
     1741 gaggactgga gcgtgatccg acgggcacct ttcatggcgg ggctggtggt ggttgcagcc
     1801 agcccgagcg ggccgttcgg ggtcatcaag gagatgttc
//
LOCUS       DASRPQ010002448         1022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_608887, whole genome shotgun sequence.
ACCESSION   DASRPQ010002448 DASRPQ010000000
VERSION     DASRPQ010002448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_608887"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..225
                     /locus_tag="VFD73_27500"
                     /pseudo
     CDS             1..225
                     /locus_tag="VFD73_27500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003178382.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha
                     C-terminal domain-containing protein"
     gene            378..950
                     /gene="rplQ"
                     /locus_tag="VFD73_27505"
     CDS             378..950
                     /gene="rplQ"
                     /locus_tag="VFD73_27505"
                     /inference="COORDINATES: protein motif:HMM:TIGR00059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HZI77718.1"
                     /translation="MPTPTKGPRLGGGPAHERLMLANLAASLFEHKRITTTVTKAKRL
                     KPYAERLVTFAKRGDLASRRRVLGLISNKGIVHELFTDIAQAVENRDGGYTRITKIGN
                     RKGDNAPMAVIELVLEPVSAKQAVVAEATQAAAKAAPAAEEAPAEEAPAAEEAAATEE
                     APAAEEAATEEAPAAEEAAEAPAAEEKDAK"
BASE COUNT          211 a          354 c          301 g          156 t
ORIGIN      
        1 ggcccgtcgc ccaccgacgc tgccctggca gccgacatgg cactgccgat cgaggatctg
       61 gacctcaccg tccgttccta caactgcctc aagcgtgagg gcatccacac cgtgggtgaa
      121 ctcgttgccc gctccgaggc cgacctgatg gacatccgca acttcggtgc aaagtccatt
      181 gacgaggtca aggcaaagct ggttgaactg ggcctgtccc tcaaggactc gcctcccggt
      241 tttgacctcg cagcacgcgc cgcagcaatc gaagaggacg acgccgcttt cggcgacgac
      301 gaactctaaa ccagaccttg gccggcgggc agcaccatgg tgtgccgccc acggcttcca
      361 catgaggaga aacaattatg cctaccccca ctaagggtcc gcgcctcgga ggcggcccgg
      421 ctcacgagcg cctcatgctc gcgaacctgg cagcatccct gttcgagcac aagcggatca
      481 ccaccacggt gaccaaggcc aagcgcctga agccgtacgc agagcgcctg gtgaccttcg
      541 ccaagcgtgg cgacctcgct tcccgccgcc gcgtactcgg cctgatcagc aacaagggca
      601 ttgtccacga gctgttcacc gacatcgccc aggctgtgga gaaccgcgac ggtggctaca
      661 cccgcatcac caagatcggc aaccgcaagg gcgacaacgc tcccatggct gtcatcgaac
      721 tggtcctcga gccggtttcc gccaagcagg ccgtcgtagc cgaggctacc caggctgctg
      781 ccaaggctgc tccggctgcc gaggaagctc ccgctgaaga ggctccggcc gctgaggaag
      841 ctgctgcaac cgaagaggca cctgctgctg aagaagctgc aaccgaagag gctccggccg
      901 ctgaggaagc tgccgaggct cccgcagccg aggagaagga cgcgaagtaa ttcgctgatt
      961 ctcttcgcat agacttaggt ctgtgaacca ccaaaaaccc gcggcccccg ttccaggggg
     1021 cg
//
LOCUS       DASRPQ010002449         1857 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4366163, whole genome shotgun sequence.
ACCESSION   DASRPQ010002449 DASRPQ010000000
VERSION     DASRPQ010002449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1857
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4366163"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1803
                     /locus_tag="VFD73_27510"
     CDS             <1..1803
                     /locus_tag="VFD73_27510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77719.1"
                     /translation="KIERVGVTEGTGGRATSMAWIGHDLWLMDVGFLNRIQNADQCFY
                     TFPKCSAVLQFNNLFADSGMESDQFISSIPNGRYLYWANGSRLMRYDTTTKALMRVWS
                     TGGTVPPTGFFQNYSMILGINFVQTLTPTLLPDGSFIEDMTIVNDPVVTALFPPATLI
                     PPRVGAGQAWVLAASGTMAPGQQCDALATPSVIQNPPPCAIGVIGNPGAIESPAPVAA
                     KRAILLAAGVTHPRGLLWLNSNWWVSDEALGFCRIDQNLVTGLGTLTNCFQPAPGFIP
                     GQPAADAPAGPGSTQNVYVPDASGLTTSIYRLIFTPSPTGGSLALNGILDGTGSRRGT
                     WLQSVALPTGPFNDGALYLLYADSGFVEKITNPATAPAAPVQIARLFNGIGGISMAFN
                     GNDLYISELGPPPIAGQFIKKGVVTNLLKASPSMGQGSASPVKRAIARLQTPQIIVEN
                     PGGFAIGPATVRPSCLPPPGVKLSPSVPADPATTPAFYIGTLGMTADGVFNPGVSNGL
                     AEDPEVDQYDFVCNVQQVWVTEGVVDPLLSTAVPLGAVTAMALDGPAPGAVLAIGDDP
                     SVIVPTQTRQRGIIRMNGPPGTGSVGQGHVYIVP"
BASE COUNT          344 a          605 c          522 g          386 t
ORIGIN      
        1 aagattgagc gcgtaggcgt gacggaaggc accggcggac gcgccaccag catggcctgg
       61 atcggccacg acctctggtt aatggatgtg ggtttcctca accgcatcca gaatgctgac
      121 cagtgcttct acactttccc gaagtgctcg gcggtcctcc agttcaataa cctcttcgcc
      181 gattcgggca tggagtctga ccagttcatc tccagcatcc ccaacggccg ttatctctac
      241 tgggccaacg gcagccgtct gatgcggtat gacaccacca ccaaagctct catgcgggtc
      301 tggagcaccg gtggaaccgt gccgcccacg ggcttctttc agaactactc gatgattctg
      361 ggcatcaact tcgtccagac gctgactccg acactattac cggatggcag cttcattgaa
      421 gatatgacca tcgtcaatga tccagtagtc accgccctgt tcccgccggc aacgttgatc
      481 ccaccccgcg tcggcgcagg ccaggcctgg gttttggctg catcaggcac catggctccg
      541 ggacagcagt gcgatgccct ggctactccg tctgtcatcc agaatcctcc gccgtgcgcc
      601 atcggtgtga ttggaaaccc gggtgcaatt gaatccccgg ctcctgtggc tgccaagcgg
      661 gcaattctgc tcgccgccgg cgtaacgcat cctcgtggct tgttgtggct gaacagcaat
      721 tggtgggtat cggacgaggc gctcggcttc tgtcgcattg accagaacct ggtcaccggt
      781 ctcggaacgc tgaccaactg cttccagcct gccccgggct tcatccccgg acagcctgcg
      841 gctgatgcgc ctgccgggcc tgggtccacg cagaacgtct acgtgcccga tgcctcgggt
      901 ctcaccacat cgatttatcg gcttatcttc acacccagcc cgaccggtgg atcattggca
      961 ttgaacggaa tcctcgatgg tactggcagc cgcagaggaa catggttgca gtctgtggca
     1021 ttgccgactg gtccgttcaa cgacggagcg ctgtatctcc tctacgcgga cagcggattt
     1081 gtggagaaga tcactaaccc ggcgactgct cccgcagcac cggtccagat tgctcgcctg
     1141 ttcaacggaa ttggcggcat cagcatggcc ttcaacggaa acgacctcta catctctgag
     1201 cttggaccgc cgcccatcgc gggacagttc atcaagaaag gcgtcgtcac caacctgctg
     1261 aaggcttcgc ccagcatggg acagggcagc gcttcacctg tgaaacgcgc catcgctcgc
     1321 ctccaaactc cgcagattat cgtggagaat ccgggtggct ttgctatcgg tccggccacc
     1381 gtgcgcccat cttgcctgcc gcctccggga gtaaaactct cccccagcgt gccggcagat
     1441 cctgccacta ccccggcctt ctatatcggc acactgggta tgaccgctga tggcgtcttc
     1501 aacccgggcg tatccaacgg cctggctgag gatccggaag tggatcagta tgacttcgtc
     1561 tgcaacgtcc agcaggtctg ggtaaccgag ggcgtggttg atccgctgct cagcaccgca
     1621 gttccgctgg gcgccgtcac ggcaatggca ctggacggtc ctgcgcccgg tgcggtcctg
     1681 gcgatcggcg acgatccatc agtcatcgtt ccgacacaga ctcgtcagcg cggcatcatt
     1741 cgcatgaatg ggcctcccgg aaccggctct gtgggccagg gacacgtcta catcgttccg
     1801 taatttcact gcagcactta cacaacaggc cggcggcttg tccgccggcc tgagttt
//
LOCUS       DASRPQ010002450         1758 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2486396, whole genome shotgun sequence.
ACCESSION   DASRPQ010002450 DASRPQ010000000
VERSION     DASRPQ010002450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1758
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2486396"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1076
                     /locus_tag="VFD73_27515"
     CDS             <1..1076
                     /locus_tag="VFD73_27515"
                     /inference="COORDINATES: protein motif:HMM:NF014798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77720.1"
                     /translation="EALALGSLLTEGIPVRFTGQDTERGTFSQRHLVLHDVNTGASIA
                     PISNLPGALAPMELHNSPLSELATLGFEYGYSVAAPEALVLWEAQFGDFVNAAQVIVD
                     QFISAGLAKWGLTTRLTLLLPHGYEGQGPEHSSARMARFLHLAAEGNIRVVNCTTPAQ
                     YFHLLRRQAKRSRQRPLVLFSPKSLLRHPLATSKLSDLTSGHFQPVIDDAFFAKQPEK
                     AERVLMCTGKVYYDLLPEAEKLGSKRPAIIRLEQLYTFPWTELRQVLPRYSGAKELIW
                     VQEEPLNMGAWRYLEAKLRELVAEGHGMDIGYAGRPERASPAEGYPAAHAAEQTRILR
                     EALESRAPRPSLETMAEAGEGQG"
     gene            complement(1125..1442)
                     /locus_tag="VFD73_27520"
     CDS             complement(1125..1442)
                     /locus_tag="VFD73_27520"
                     /inference="COORDINATES: protein motif:HMM:NF013964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease signature motif containing
                     protein"
                     /protein_id="HZI77721.1"
                     /translation="MQSHREWLLAQHGPVCAYCGTETSEDAITLDHVRPRRGQTAYDR
                     PDNLVLACRDCNAAKADTPLMAFLMQRRSRGVFLLHYGEHLSEPVRHLIRQASERPIP
                     TRD"
BASE COUNT          324 a          542 c          573 g          319 t
ORIGIN      
        1 cggaggcgct ggcgctcggc tcgctgttga ccgagggcat cccggtccgg ttcaccggtc
       61 aggacaccga gcggggcacc ttcagtcagc gccacctggt cctccacgac gtgaacaccg
      121 gagcgtccat cgcaccgatc agcaatctcc ccggggcact cgctcccatg gagctgcaca
      181 acagcccgct ctccgagctc gccactctgg gattcgagta cggctacagt gtggcggctc
      241 ccgaagcgct ggtgctgtgg gaggcccagt tcggtgattt cgtgaatgcc gcccaggtaa
      301 tcgtcgatca gttcatctcg gcggggctgg ccaaatgggg gctgacgact cgccttacct
      361 tgttgctgcc gcacggctac gagggccagg gaccggagca ctcgagcgcc cgaatggcac
      421 gcttccttca cctggcagcc gagggcaaca tccgggttgt gaactgcacg acgccggccc
      481 agtacttcca tctgttgcgt cggcaggcga agcgttcccg gcagaggcca ttagtgctgt
      541 tcagtccgaa gagtcttttg cgccatccgc tggcgacctc gaagctctcc gacctgacca
      601 gcgggcattt tcagccggtc atcgacgatg cgttcttcgc gaaacagccg gaaaaagccg
      661 agcgggttct tatgtgcacc ggcaaggtgt actacgacct cctgccggag gctgaaaagc
      721 tgggctccaa gcgcccggcg attatccggt tggagcaact ttacactttc ccctggacgg
      781 agcttcggca ggtgctaccg cggtacagcg gggccaagga gctgatctgg gttcaggaag
      841 agccactcaa catgggagcg tggcgctatc tcgaagccaa gctgcgcgag ctggtggctg
      901 aggggcatgg aatggatatc ggttacgccg gccggccgga acgggccagt ccggccgaag
      961 gttacccggc cgcgcacgcc gccgagcaaa cccggattct cagggaggct ctggaatcca
     1021 gggcgcctcg accgtccctc gagaccatgg ccgaggcagg tgagggtcag ggctgagggt
     1081 tcatcaaatg agaagggcgg ccatctcggg ccgccctctt cgtttcagtc ccttgtaggg
     1141 ataggtcgct cagatgcctg ccggatcaga tgccggaccg gctctgagag atgctctcca
     1201 taatgaagga ggaacactcc ccgggagcgc cgctgcatca gaaacgccat caggggggtg
     1261 tcggccttgg ctgcattaca gtcgcgacag gcaaggacca ggttgtcggg ccggtcatag
     1321 gcggtttgcc cgcgccgggg ccggacgtgg tccaaggtga tggcgtcttc gctggtctcg
     1381 gtcccgcaat acgcgcaaac cgggccatgt tgggcgagca accattcacg atgcgactgc
     1441 atggaacgac cgggggaacg acggaaactg gggaccgaaa ctgcggaatg tcttcgagat
     1501 ctgcgtgcca caaaatacca agttgaaggt tggatcggcg gcctgaccct tcaggtcacc
     1561 ggctaacttc ctgtatcata gcaagtttgg agccaaaacg atagttccgg cctcagggag
     1621 ctgccgattg cttgccgacg tcggctgcct gggcccgata gcgcccttcc agtagccatc
     1681 cccagcgctg gtcgtacggg tggaccaggg cggcgggtcg cccttcctcc cggaagagtg
     1741 gccgtccctc attggccc
//
LOCUS       DASRPQ010002451         1149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_609837, whole genome shotgun sequence.
ACCESSION   DASRPQ010002451 DASRPQ010000000
VERSION     DASRPQ010002451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_609837"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..378
                     /locus_tag="VFD73_27525"
     CDS             <1..378
                     /locus_tag="VFD73_27525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77722.1"
                     /translation="ARHDLRDELTSNSGNPGWVTDEIVNHYAAAQISDLDGSLDALHQ
                     MSKVNETDSLANRLARCTVPVTLLIGAAPHRLPVAPEDIDLLKQRVRRFSLEPVPGAG
                     QYIQEENPTAVLSALSRLARVAT"
     gene            complement(694..>1149)
                     /locus_tag="VFD73_27530"
     CDS             complement(694..>1149)
                     /locus_tag="VFD73_27530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77723.1"
                     /translation="RKTLQVHQDHLQHHASNRVDGAIAAVPATSLRRSTPSDGYGTPT
                     TQTVAASLNQKVEKYGRTTGLTIGKVVALNAAVNVDYGNNRVARFVGQIVIQGSAGKF
                     SGAGDSGSLIVDANRHPVGLLFAGAKDGTTFANPIGAVLNALGVTIDGT"
BASE COUNT          211 a          374 c          359 g          205 t
ORIGIN      
        1 gctcgacacg atctcaggga cgagctcacc agcaactcgg gcaacccggg ctgggtgacc
       61 gacgagatcg tgaaccacta tgcagccgcc cagatttcgg atctcgacgg ctcgctcgac
      121 gcgctgcatc agatgtcaaa ggtgaatgag accgactccc tggccaaccg gctggcacgc
      181 tgtaccgttc ccgtcaccct gctgatcggc gcggcaccgc accgcctgcc ggtagcaccg
      241 gaggatatcg atctgctgaa gcaacgggta cgccggttct ctctcgagcc ggtgccgggc
      301 gctggacagt acatccagga ggaaaacccc accgcggtgc tctcggcgct gagccggctg
      361 gctcgggtag caacctagat ctactgcgcc ctgatcggcc cggtctcgcg gacctccact
      421 cgaatgcctt cgatttcctt ggaagtttct tccgcagctc aggcgtgagt cgatccacca
      481 gaaccagaat gcagggcgct ccgccgcagc ttccttccgc cgtccccacc actccgcgaa
      541 gcgacatcaa gcgaccggtg tagcgctcga gaacctggct tacgggaggt ggcggcacgc
      601 tgccgtcctt cgctgggctg gtgcagtgca ggaggaatgg gaggagcagc agcgccggca
      661 ctccccccaa gtgagatcga atcgagaggc cgatcaggtt ccgtcgatgg ttacgccgag
      721 ggcgttgagg accgcgccga tcggattagc gaaggtggtg ccgtccttgg ctcccgcgaa
      781 gagcagtccc accggatgac gattcgcgtc gacgatcaga gagccggagt cgcctgcacc
      841 ggagaacttg ccagccgaac cctgaatcac gatctgtccc acaaaccgcg cgacccggtt
      901 gttgccataa tccacgttga ccgccgcatt cagagcgacc accttgccga tggtgagtcc
      961 ggtggtcctg ccgtacttct ccaccttctg attaagcgag gccgccaccg tctgagtggt
     1021 cggggtgccg tagccgtcgg acggcgtgct ccgccgaagg ctggtcgcag ggacggcggc
     1081 gatcgcccca tcaacccggt tcgatgcgtg gtgctgaagg tgatcttgat gaacttggag
     1141 agttttccg
//
LOCUS       DASRPQ010002452         1091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1234963, whole genome shotgun sequence.
ACCESSION   DASRPQ010002452 DASRPQ010000000
VERSION     DASRPQ010002452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1234963"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1006
                     /locus_tag="VFD73_27535"
     CDS             <1..1006
                     /locus_tag="VFD73_27535"
                     /inference="COORDINATES: protein motif:HMM:NF018161.4"
                     /note="back-translocating Elongation Factor EF4; binds to
                     the ribosome on the universally-conserved alpha-sarcin
                     loop; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HZI77724.1"
                     /translation="GDTITTAGPAGKDVKPLPGYKEPLPVVFCGFYPTGDTDYEDLKK
                     ALERLSLNDSSFKWQAETSEALGFGFRCGFLGLLHMEIVRERLEREFDLSLISTAPNA
                     VYRVVMDTGQEIRVTNPSDFPGGSEPGKGKVDRVYEPVVRATVISPAEYIGTIMELCQ
                     SRRGSLIGMDYLSSDRVEIRYTLPLAEIIFDFFDNLKSRTRGYASLDYEPDGEQQANL
                     VKVDILLQGQPVDAFSQIVHADNAREYGLAMTAKLKELIPRQQFEVPIQAAVGARIIA
                     RENIRALRKDVLAKCYGGDITRKRKLLERQKEGKKRMKQVGSVEIPQEAFLAVLSMDD
                     "
BASE COUNT          220 a          348 c          358 g          165 t
ORIGIN      
        1 cggcgacacg atcacgacag cgggcccggc cggaaaggac gtcaagcccc tgcccggcta
       61 caaggagccg ctccccgtcg tcttctgcgg cttctacccc accggggaca cggattacga
      121 ggacctgaag aaggccctcg agcggctcag cctcaacgac tccagcttca agtggcaggc
      181 cgagaccagc gaagcgctgg gcttcggctt ccgctgcggc ttcctgggcc tgctgcacat
      241 ggagatcgtc cgcgagcgcc tggagcgcga attcgacctg tccctgatct ccaccgcacc
      301 gaacgccgtc taccgcgtcg tcatggacac cggccaggag atccgggtga cgaacccgag
      361 cgacttcccg ggaggcagcg agccaggcaa gggcaaggtc gaccgggtct acgagccggt
      421 ggtgcgcgcc acggtgatct ccccggccga gtacattggc accatcatgg agctgtgcca
      481 gagccggcgc ggttccctga tcggcatgga ctacctatcg tcggaccggg tggagatccg
      541 ctacacgctg ccgctcgccg agatcatctt cgacttcttc gacaacctca agtcccggac
      601 ccgcggctac gcgtcgctgg actacgagcc cgacggcgag cagcaggcca acctggtcaa
      661 ggtcgacatc ctgctgcagg gccagccggt ggacgcgttc agccagatcg tgcacgcgga
      721 caatgcccgc gaatacggcc tggccatgac ggcgaagctc aaggagctga tcccgcggca
      781 gcagttcgag gtgccgatcc aggcggccgt cggagcgcgc atcatcgccc gggagaacat
      841 ccgcgccctg cgcaaggacg tgctggccaa gtgctacggc ggtgacatca cgcgcaagcg
      901 caagctgctc gagcggcaga aggagggtaa gaagcgaatg aagcaggtgg gctcggtgga
      961 aataccgcag gaagcgttcc ttgcggtgtt gtcgatggac gactaaggca gaaagtcgac
     1021 gagcgagatt attggttcgg ttcgggtgat aaccgcaaca actccgaaga cagcaggtac
     1081 tggggattca t
//
LOCUS       DASRPQ010002453         1397 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2486691, whole genome shotgun sequence.
ACCESSION   DASRPQ010002453 DASRPQ010000000
VERSION     DASRPQ010002453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1397
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2486691"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..241)
                     /locus_tag="VFD73_27540"
     CDS             complement(<1..241)
                     /locus_tag="VFD73_27540"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HZI77725.1"
                     /translation="MTKPAGPVPLLKPTPPSTPAQNGQSRGEVTADTVLASACLPFIS
                     QAVEIDGEAYWDGGYMGNPAIFPLIYNCECADVIVV"
     gene            complement(777..>1397)
                     /locus_tag="VFD73_27545"
     CDS             complement(777..>1397)
                     /locus_tag="VFD73_27545"
                     /inference="COORDINATES: protein motif:HMM:NF014430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI77726.1"
                     /translation="PWTQVHARWLSNLSFEHPAQYLVLREYRQAIDDAEARLERLTQQ
                     VAGVVSSWSMAPVVEAYQALRGVAFLTAVTFVAEIGDVRRFETPCQLMAYLGLVPSER
                     STGEQVWRGSITKAGNPRARRVLIEGAWTYRYPARLSRRLQVRQESLPTVVRAIAWKA
                     QLRLCARYRRLMAAGKRQTVVTTAIAREMAAFLWAIGHAVEPRPAA"
BASE COUNT          265 a          439 c          463 g          230 t
ORIGIN      
        1 ggaccacgat cacgtccgcg cactcgcaat tgtagatcag cgggaagatg gccggattac
       61 ccatgtaccc gccatcccaa tatgcctctc cgtcgatttc gaccgcctga ctgataaagg
      121 gcagacaggc agaggcgaga accgtgtcag ccgtgacctc acctcgactt tggccatttt
      181 gggcgggcgt tgagggaggc gttggcttga ggagcgggac tgggccagcg ggttttgtca
      241 catcaagagg aagccgggat atgcaaaaaa cccggctatg cccgcgacgg gcttcgggcc
      301 aaggtgcgtc ttatgatggc caaccgaagc gccccgctcc gcaggccctt gaagggacac
      361 gcggcgctac ccggctgatc cctcaaagcc accccgatct aaccggccaa cgaggaggct
      421 ggatcagcga ctggccggta aattggccaa agtcgagctg atgttcggtg tcaaaggctg
      481 tgaacgcgac agctcgctcc ctgcagagat ggggacccac cgagatagag ctattgcgca
      541 gggccggaga cagggccgtt cagacgacgg ttgagcagac tctgatgcgc gggttggtca
      601 ccgcagttcc gtgtgttcgt ccggggctgc ctcgatctgc cagcgggcgt cgatgatgat
      661 catcggccac acaattcatg cgagggttcc cctccgaggc cctgccgccg gcgctgcgca
      721 cgcgcagatg tcagttcacg tggatcggac cctccgcggg actgaggggg ttcggcttat
      781 gcggccgggc gcggttcaac cgcatgaccg atggcccaca ggaaagcagc catctcccgc
      841 gcaatcgcgg tggtgaccac ggtctggcgt ttgcctgctg ccatcagccg gcgataacgc
      901 gcgcatagac gcagctgagc cttccaggcg atcgcccgga cgacggtcgg caggctctcc
      961 tgtctgactt gcagacgccg gctcaggcga gccgggtaac ggtaggtcca ggcgccctcg
     1021 atcagcaccc ggcgcgctcg cgggttgccc gccttggtga tggagccgcg ccagacctgc
     1081 tcgccggttg agcgttccga aggcaccaga ccaagatagg ccatgagctg acagggggtc
     1141 tcgaagcggc gcacatcccc gatctcggcc acgaaggtga ccgccgtcag aaaggcgaca
     1201 ccgcgcaggg cttggtaggc ttcaaccacc ggcgccatcg accaggacga gaccaccccg
     1261 gcgacttgct gcgtcaggcg ctccagtcga gcctcagcat cgtcaatggc ctgccggtat
     1321 tcgcgcagga ccagatactg ggccgggtgc tcgaagctga ggttggagag ccaccgggca
     1381 tggacctggg tccaggg
//
LOCUS       DASRPQ010002454         1047 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4366659, whole genome shotgun sequence.
ACCESSION   DASRPQ010002454 DASRPQ010000000
VERSION     DASRPQ010002454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4366659"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..387)
                     /locus_tag="VFD73_27550"
     CDS             complement(<1..387)
                     /locus_tag="VFD73_27550"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Scr1 family TA system antitoxin-like
                     transcriptional regulator"
                     /protein_id="HZI77727.1"
                     /translation="MTGTSPTARQRELGTRMRGLRNEHNMTVEEVAERLLCSATKISR
                     LETGARRPSLRDVRDLCELYEVDESTSAELMSLAREARAAGWWTQYNDLNLDPLIGLE
                     EAATDITCYAMNYIPGLLQTREYAQGI"
     gene            659..>1047
                     /locus_tag="VFD73_27555"
     CDS             659..>1047
                     /locus_tag="VFD73_27555"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HZI77728.1"
                     /translation="MTELSLEEAGDVRQRTVTWQDPLVGAALARDLSGLEYLLGIAEG
                     SIPGPPIAALLGMSVRSVERGRVAFGLDVGEHLYNPIGSVHGGVFCTLLDSAMGCAVH
                     SSLGRGQAYTTLELKVNLVRALTVNTP"
BASE COUNT          161 a          345 c          349 g          192 t
ORIGIN      
        1 aataccctgg gcatactccc tggtctggag caggcccggt atgtaattca tcgcgtaaca
       61 ggtaatatcc gtagctgcct cttccagacc gatgagcggg tccaggttga ggtcattgta
      121 ttgagtccac cagcccgcag cgcgtgcttc cctggccagg ctcatcagtt cggccgacgt
      181 cgattcgtct acttcgtaga gttcgcacag gtcccggaca tcgcgcaggc tcggccggcg
      241 cgcgccggtc tccagtcggc tgatcttcgt agcagagcag agaagcctct cggcgacttc
      301 ttccacagtc atgttgtgct cgttgcgcag tcccctcatc cgcgtgccca gctcgcgctg
      361 gcgcgccgtg ggactcgtcc cggtcacaac tactgctcct catcgagagc ttgggcagcc
      421 cccgtcagcc ctagaggcgg ttgcctggag cgacgggaat gcggaggcca gcgggttccg
      481 gccattggca tgtgccaacg ataaggatgg ttaccctgcg cttgcaactg gggcgcgggc
      541 agcgcgaggc ggggaccagg atgctcccgg tccccgcctc ggagagtagc tacagctgca
      601 tggtgacggc cttgacctcg gtgtaggcct cgctccgggc tgagttaagc tgggttccat
      661 gacagaactc agcttggagg aggccgggga cgtcaggcag cgcaccgtca cctggcaaga
      721 cccgctggtc ggggcggcgc tcgcccgcga cctgagcggc ctcgagtacc tgctcggcat
      781 cgcggagggc agcattcccg ggccgccgat cgcggcgctg ctcggcatga gcgtccgcag
      841 cgtcgagcgg ggccgggtgg cgttcggcct ggacgtcggc gagcacctgt acaacccgat
      901 cggctccgtc cacggcggcg tgttctgcac cctgctcgac tcggccatgg gctgtgccgt
      961 gcactcctcg ctcggccggg ggcaggccta caccaccctc gagctgaagg tgaacctggt
     1021 cagggcgctg accgtgaaca cgcctga
//
LOCUS       DASRPQ010002455         1062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2486848, whole genome shotgun sequence.
ACCESSION   DASRPQ010002455 DASRPQ010000000
VERSION     DASRPQ010002455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2486848"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1062
                     /locus_tag="VFD73_27560"
     CDS             <1..>1062
                     /locus_tag="VFD73_27560"
                     /inference="COORDINATES: protein motif:HMM:NF012239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HZI77729.1"
                     /translation="LNFAPLQLENGRTAGVVDVPGHEDFVRTMVAGASGIDLALLVIA
                     ADEGVMPQTEEHLLVLEQLGVKVGIPVLTKIDVVDSDWLELVTLEVSERLASSSIAFD
                     PPVSVSARTGLGIDGLRQLIVTHMKPAGGASASDGFRMPIDRVFSMAGVGTVVTGTPW
                     SGRLSVGDSVLALPAGVRGRVRSLESYGHSVQRAEPGVRAAIGLAGIERAEVARGATL
                     VTEALPWAITRSLDVEVSLAPRAVRALTPRSRVRVLLGTAEVMARAFPEAPIQPGESG
                     MARLKLEGALVARAQDRFVLRSYSPVTTIGGGKVLDPFPSRRRSLWLPGLRSLDPSVR
                     LHSLLQRRPSGIDAAQLPLL"
BASE COUNT          165 a          321 c          373 g          203 t
ORIGIN      
        1 tctgaacttt gcgccgctcc agcttgagaa cggccgcact gccggggtcg tggatgttcc
       61 cggtcatgag gatttcgtcc gaaccatggt cgctggagcg tcaggcatcg atctggccct
      121 cctggtgatt gcggcggacg aaggtgtcat gccccagacg gaagagcact tgctggtctt
      181 ggagcaactc ggagtgaagg tgggaattcc ggtgcttaca aagatcgacg tggtggacag
      241 tgattggctg gagctggtaa cgctcgaggt gtccgagcgg ctggcttcgt cttccatcgc
      301 cttcgacccg ccggtctccg tctctgccag aacaggactc ggtattgacg ggctccggca
      361 actaatcgtt acccacatga aaccggccgg cggtgcctcg gcatccgacg gctttcgcat
      421 gccgatcgac cgcgtctttt ccatggcggg agtcggaaca gtcgtcaccg gcacgccgtg
      481 gtcgggacgg ctgagcgtgg gcgattcggt tctggcgctt cccgccgggg tgcgcggcag
      541 agttcgttcg ttggagagct acggacactc agttcagcgg gcggagccgg gagtcagagc
      601 cgcgatcggc ctcgccggaa tcgagcgtgc tgaagtggct cggggagcga ccctggtgac
      661 tgaggctctc ccttgggcga taacccggtc gctggacgtt gaagtatccc tggcccctcg
      721 ggcagtgcgg gcgctgactc cgcggagccg cgtgcgggtg ctcctcggta ccgccgaggt
      781 gatggcccgg gcattccccg aggccccaat tcaaccgggc gaaagcggta tggctcggct
      841 caagctggag ggcgcgctgg ttgcccgggc gcaggaccgg ttcgtgttaa ggagctacag
      901 tccggtgacc accatcggcg ggggcaaggt actggacccg tttccctctc ggcggcggag
      961 cctttggctt ccggggctga gatcactgga cccctcggta cggctgcaca gcctgctaca
     1021 gcggaggcca agcggaatcg acgccgcgca gctcccgctg ct
//
LOCUS       DASRPQ010002456         1715 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4366894, whole genome shotgun sequence.
ACCESSION   DASRPQ010002456 DASRPQ010000000
VERSION     DASRPQ010002456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4366894"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            206..367
                     /locus_tag="VFD73_27565"
     CDS             206..367
                     /locus_tag="VFD73_27565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77730.1"
                     /translation="MKHIITLFVLTAFSVAVAQAGEECCKGKAACDTKAKAAKSDGSV
                     KGAQQLVKK"
     gene            470..1669
                     /locus_tag="VFD73_27570"
     CDS             470..1669
                     /locus_tag="VFD73_27570"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: protein motif:HMM:NF006803.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA];
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HZI77731.1"
                     /translation="MKQTFDSIEVVIRDIRQGRMAIFVDDADRENEGDLIMAAEHVTP
                     AAINFMARFGRGLVCVPTTEDRLKQLGIERMVSQNRESFKTDFQVSVDAARGVTTGIS
                     AADRARTIRVMAEPTAVPEDLVQPGHVFPLRARPGGVLQRAGHTEAAVDLARLAGCRP
                     IGVICEILKDDGSMARLPDLFKFARKHKLKLCTIEELIRYRRTRERLVERVETVRMPT
                     DYGDFDLHLYRSTTDGQHHLALVRGDVTRRKDVLVRVHSECLTGDVFGSRRCDCGPQL
                     HEAMRRIANDGCGVVVYMRQEGRGIGLGPKIQAYKLQEKGYDTVEANLKLGFKMDLRE
                     YGLGAQILADLGLKRIRLLTNNPKKIVGLEGYGLEIVGQVPIRIPPNPHNAKYLKTKK
                     EKLGHLF"
BASE COUNT          311 a          528 c          588 g          288 t
ORIGIN      
        1 gtggcgcgcg cccggtcccc gggcgcagcg gtgggaagcc ggagacgacg ctggcaggct
       61 cccacgactg cggctgatgg gcttgctgcg ggcggggacc gcccgtgctc cgaccggatg
      121 cgtgaagctg cccacttttt gtcgacgccc tggccaaaac ccgggcttgc caaccggcta
      181 tagatgaggt aattgcatcc tcaccatgaa gcacataatt accttgttcg ttttgactgc
      241 gttcagcgtg gccgtcgccc aggcgggcga agagtgctgc aaaggcaaag ccgcctgcga
      301 tacgaaggcc aaagccgcca agtcggacgg ctcggtcaag ggcgcgcagc agttggtcaa
      361 gaagtagcct caggccagcc ttccggattc attccccgtt cgccgtgccg gtgagcgggg
      421 ttttttcttt tggcggccag ccgccggccc agtagcctcg cgcccacgaa tgaagcagac
      481 gttcgattcc atcgaagtgg tgatccggga tatccgccag gggcgcatgg ccatcttcgt
      541 cgatgacgca gaccgcgaga acgagggcga ccttatcatg gcggcggaac atgtgacgcc
      601 ggcggccatc aacttcatgg cccggtttgg gcgcggattg gtgtgtgtgc cgaccacgga
      661 ggaccggctg aagcagctgg ggattgagcg gatggtttcc cagaaccggg agtcgttcaa
      721 aaccgacttc caggtgagcg tggatgcggc gcgcggtgtg accaccggca tcagcgcggc
      781 ggatcgggcc cggaccatcc gggtgatggc ggagcccacg gcggtgccgg aggatctggt
      841 ccagcctggg cacgtcttcc ccctgcgagc ccgtcccggc ggggtgctgc agcgggccgg
      901 tcacactgag gctgcggtgg atctcgcccg gctggcgggg tgccgtccca tcggggtgat
      961 ctgcgagatc ctgaaggacg acggctcgat ggcgcgcctg ccggacctgt tcaagtttgc
     1021 ccgcaagcac aagctcaagc tgtgcaccat cgaggagctc atccgttatc gtcgcacccg
     1081 cgaacggttg gtggagcggg tggagacggt gcgcatgccc acggactacg gcgacttcga
     1141 tctgcacctc taccgatcca ctaccgacgg ccagcatcac ctcgcgctgg tgcggggcga
     1201 tgtcacccgg cgaaaggatg tgctggtccg ggtgcacagc gagtgcctga ccggcgatgt
     1261 ttttggctcg cgccgctgcg actgcggccc gcagttgcac gaggccatgc ggcggatcgc
     1321 caacgacggg tgcggcgtgg tggtctacat gcggcaggag ggcaggggaa tcgggctcgg
     1381 gccgaagatc caggcctaca agctccagga gaaaggctac gacacggtgg aagccaacct
     1441 gaagctgggg ttcaagatgg acctgcgcga gtacggcctg ggagcccaga tcttggcgga
     1501 tctcggcctg aaacgcatcc gcctcctgac gaacaatcca aagaagatcg tcggccttga
     1561 aggctacggg ctggagattg tgggccaggt gcccatccgc attccgccca acccgcacaa
     1621 cgcaaaatat ctcaagacca agaaggagaa gctcggtcac ctgttctgaa ggtcctgaac
     1681 cgccgcggtc cccggggcgc tctcagccgc cagcc
//
LOCUS       DASRPQ010002457         1533 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_309612, whole genome shotgun sequence.
ACCESSION   DASRPQ010002457 DASRPQ010000000
VERSION     DASRPQ010002457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309612"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          316 a          511 c          472 g          234 t
ORIGIN      
        1 caggcgtagc cggcctgcca tcagctccag ccgtccagcc gggaaccccc ggtaccaccg
       61 cgtcggtgac gccggccaga cctcgccatc tcagcctccg ccccgccatc ccgccctcgc
      121 acatggcgag gatggtcata atgtcctgat ccactgcttt aaatgcgcac cgcgccgtaa
      181 ggctcccgga agccggaatc atcttcccga gcttggtaag caaaccatgt gcctggcaac
      241 acccatacgc cgaccttccg aagatacggc aaaaggcata aaacccgagt ccggatcgct
      301 aaagaagaca aatcaacgat caagcctcag tccagcggta ccctgacacc gcgccaaagc
      361 aggtcccgcg cgctacttca gccatccgca tctgccgccg acagggtctt ccggaccgcc
      421 gtggcgctgg cacctctgtc cgacgtgaac gccggatggg gttcgtcatc ctgacggcga
      481 agccgatcgc cggtcacggc acagaggcga gcggcaggag ctcaggccag gacgatccag
      541 ctgccgcaga cgacggccat gccgggaacg ccgcggcaga gccgaccgcc actgcgcagc
      601 agtaaacggc tgccctggaa catccgtctc cctacccggc gtcacgctga gcgacgaggg
      661 aggtcaggga gaacgcgcgc agtgccgccg atctgtactg gaacaatccc ttcggtacgg
      721 gtcgcttgag gcgcgcagaa cggcattttc tgttgcgttg gctatcttct ggcgaatgcg
      781 cggcgaagtt cagcagccca gaactgtagc gcctggtcac gaccaaatga cagcggtctg
      841 cgaggtcgcc cgccgacctc gaaacggttc gaaccgcggc gtctataacg acaacacaca
      901 gggcacccgg taacggttga ccgaaagccg atgttcggac tggccaggaa gcgaccagcg
      961 gctacgatca ccgcgtctag gcgcacctgc gcgctcatgg tcgctcccat cctgctccaa
     1021 aatcagacac caccatgagg ttagggaacc gatgagagaa taagttggct ggtgggaacc
     1081 ctcgacgggg cgtccggatt gaaccggcgg tctcttcgtc tgaagccaag tccaggagtc
     1141 atcctgggca cgaggcatcc gacgtgcttg tactgtccgt caacgtccgc cagcgtgcgt
     1201 cagtggccga cgcaatcgtc actcagttgg tcacccacga aacccggctc ggcgagcccg
     1261 cagccaagcc tcgggcggct ccagcgggcg caggctgttg gctcgccggg ctggtcatgt
     1321 ggtggtagta gcacaccatc gaaacgtaaa ggagccaccc tggcgccctg gcccaccgcc
     1381 ctcctagcgt ggctcatgca ggcggcctga tcagcaggcc gccaggacgt cacgggaccg
     1441 caggagctgt cccgaggggc ggaaagggaa ggggaggatc gtggtggagc atcccaacgc
     1501 agcgttgatg cggaaggtcg acgaactgct cgg
//
LOCUS       DASRPQ010002458         1753 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_611407, whole genome shotgun sequence.
ACCESSION   DASRPQ010002458 DASRPQ010000000
VERSION     DASRPQ010002458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1753
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_611407"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            532..>1753
                     /locus_tag="VFD73_27575"
     CDS             532..>1753
                     /locus_tag="VFD73_27575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77732.1"
                     /translation="MKRSRLAALSLLSIPLLAAGALPASAASAASAAASQAKVLKDTA
                     GSIDEPLCQSNKSTCVDAAGTIAGKYVGHDEPSVLFKSGRPGSGNDMTYTITLPKDPK
                     TQPNASGAGGSTWNFQLRPTFWFGLTLCDTESAPEFTKTCKPDSDGNNLVGSNPNAPN
                     YIGKHPGNAFMELQFYGPGYVPQFEGFGCTAHQYCAAMTIDSLGLNQNTGVANTKACN
                     NFILGGEEPINWAYITRNGVSQAPADPLFTGTFTNPNFSAVNPDVNKDLLMNPGDRIR
                     FHMHDTPAGFRVDMTDLTTGKHGSMTASTANGFAHVLYTPNSNTCQSAPYAFHPEYST
                     ANPRGNTWSAHTYNVAMSDEIGHFENCLAIDASGNCTSAGAQDPSLDADDTGCVPGAD
                     STVVKINGCFAADGD"
BASE COUNT          355 a          583 c          524 g          291 t
ORIGIN      
        1 tgtcggccct cgaggaacaa cggagcgaaa agtaccggca tgctctgatc gcttaagaaa
       61 acaccaacgc ccgccagcag ccgacaccgg ggtgaacgtc tggggttgcg cgacagcaga
      121 ggtatctgat gtctggtgga aatggtaatg agatgtccca tttcgcgcgt tacatacccg
      181 gacgtggccg gactgccggt taaatcgcgg ctaattcgca tcgggcggaa tcgcctgccg
      241 gacagcagat ccagataacg aaagcgtcaa gtagagattt ttggttttgg ggctttcggc
      301 acgattcgtg cggctgtatg ttcatcttgt tcagttttgc ccgcagcttc agcgggtcgc
      361 ggcgccgcag gctccgtgct gctccctgga cggaggagca gccggggttc gctcggctat
      421 gcgctgagac cgatcgggca gataagtcag acgactcagg cagtccatat gaccatccgt
      481 cagcagccac cacccgctcc ctggcttcgc tgatgggcga aaggacagag attgaagcga
      541 tccagactgg ctgcgctcag cctcctgagc atccccctgc tggcggccgg cgcgcttccc
      601 gcgagcgcag caagcgccgc gagtgccgcc gcctcacagg ccaaggtcct caaagacacc
      661 gctgggagca ttgacgagcc tctctgccag agtaacaagt cgacctgcgt cgatgccgcc
      721 ggcaccatcg ctggcaagta cgtcggccac gatgagccgt ccgtcctgtt caagtccggc
      781 cgtcccggtt cgggcaacga catgacctat acgatcaccc tgccaaagga tccgaagacc
      841 cagccgaacg cgtcgggtgc cgggggctcc acctggaact tccagctgag gccgacgttc
      901 tggttcgggc tcacgttgtg cgacaccgag tccgcgcccg agttcaccaa gacatgtaag
      961 ccggactccg acggcaataa cctggtcggc agcaatccga acgcgccgaa ctatatcggc
     1021 aagcatcccg ggaacgcctt catggagctc cagttctacg ggccgggcta tgtgccgcag
     1081 ttcgagggat tcggctgtac tgcgcatcag tactgcgcgg cgatgaccat cgacagcctg
     1141 gggctgaacc agaacactgg cgtcgctaac accaaggcgt gcaacaactt catcctcggc
     1201 ggcgaggagc ccatcaactg ggcctacatc accaggaacg gggtttccca ggcgccggcc
     1261 gacccgttgt tcaccgggac cttcaccaac ccgaacttca gcgcggtgaa cccggacgtg
     1321 aacaaggacc tgctcatgaa ccccggcgac cgcatccggt tccacatgca cgacacgccg
     1381 gccgggttcc gggtcgacat gaccgacctc accacgggca agcacggctc gatgaccgcc
     1441 tcgaccgcca acgggttcgc ccacgtcctg tacaccccga actccaacac ctgccagtca
     1501 gcgccctacg cgttccaccc ggagtactcg accgcgaacc cgcggggaaa cacctggtcg
     1561 gcccacacct acaacgtggc catgtccgat gagatcggcc acttcgagaa ctgcctggcg
     1621 atcgacgcga gcggcaactg cacctcggcg ggcgctcagg acccgagcct ggacgcggac
     1681 gacaccggct gcgtccctgg cgccgactcc acggtggtga agatcaacgg ctgcttcgct
     1741 gcggacgggg att
//
LOCUS       DASRPQ010002459         1692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2488136, whole genome shotgun sequence.
ACCESSION   DASRPQ010002459 DASRPQ010000000
VERSION     DASRPQ010002459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2488136"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..708
                     /locus_tag="VFD73_27580"
     CDS             <1..708
                     /locus_tag="VFD73_27580"
                     /inference="COORDINATES: protein motif:HMM:NF020091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-isopropylmalate synthase regulatory
                     domain-containing protein"
                     /protein_id="HZI77733.1"
                     /translation="PNKAVVGRNAFAHEAGIHQHGMLRNGQTYEIIQPEMVGIPRSTL
                     VLGKHSGRHALERRYQELGYQLADDELAAVYQEFIALAERKREILDEDLLALLHESFH
                     DAPEEYQLTHLRVVCGNVTATAEVRMTGPWSGERSARGSGDGPIAAAFTAVSEILGRH
                     VEVQSLNLRSVTPGRDSVGQVFLQAKIDGKTLSGHSASTDIVEASARALVHALNKARH
                     AERLEDSSLNAVYLWGV"
     gene            815..>1692
                     /locus_tag="VFD73_27585"
     CDS             815..>1692
                     /locus_tag="VFD73_27585"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HZI77734.1"
                     /translation="MSETLSGAQILCRALVEQKVDLLFGYPGGAIMPFYHAFPEYSAL
                     RHVLVRHEQAAAHAADGYARASGRVGVCVATSGPGATNLVTGLATAHMDNSPVVAITG
                     QVSRAMIGRDAFQETDIIGVTQPITKHNRLVEDIDELEEAVAEAFFVAANGRPGPVLL
                     DIPKDVQTAKAEWRGGETIHRGDRAQNPAGLPNEDPVQDAIALIAAAERPLIMAGHGV
                     LLAEATDELRTLAERTGIPVITTLLGISAFPASHPLHLGMPGMHGEVHVNRAIQQADL
                     IIGLGLRFDDRVTGNLA"
BASE COUNT          310 a          529 c          571 g          282 t
ORIGIN      
        1 ccgaacaagg cggtcgtggg gcggaatgcc tttgcccacg aggccggcat ccaccagcat
       61 gggatgcttc ggaacgggca gacctacgag atcatacagc cggagatggt ggggattccg
      121 cgctcgacgc tggtgttggg caaacattcc ggccggcacg cgttggagcg gcgctatcag
      181 gagctgggct atcagctggc ggacgacgag ctggccgcgg tgtatcagga gttcatcgcg
      241 ctggcggaac ggaagcggga gatcctggat gaagatctgc tggccctctt gcacgagagc
      301 ttccatgacg cgccggagga atatcagttg acccacttgc gggtggtctg cggcaacgtc
      361 accgccaccg ccgaggtacg gatgaccggt ccctggtccg gggagcgctc cgcgcgcgga
      421 tccggcgacg ggccgatcgc cgccgccttc actgccgtca gtgagatcct gggccgccat
      481 gtcgaggtgc agagcctcaa ccttcgctcg gtgacgccgg gacgtgacag cgtcggtcag
      541 gtatttctgc aggcaaagat cgacggcaag acgctttccg gtcacagcgc atcgaccgat
      601 atcgtcgagg ccagcgcgcg cgcactggtc catgcgctca acaaggcccg ccacgccgag
      661 cggctggagg acagctcgtt gaacgcggtc tacctgtggg gtgtctgatg gcagtgacat
      721 ggcacgagtt acgagtcacg gaagcgtcaa gtccggacct taaccgcagc cgcgacgcgc
      781 gactcgcgac tcgcgactgt ctttgcgagc aacgatgagc gaaacactgt ccggcgccca
      841 gatcctctgc cgagcgctgg tggagcagaa agtcgatctc ctgttcggct accccggcgg
      901 tgcgatcatg ccgttctatc atgccttccc ggagtattcc gctctccgcc atgtgctggt
      961 gcggcacgaa caggccgcgg cccacgcggc cgatggctac gcccgcgcca gcggacgggt
     1021 cggtgtgtgc gtggccacct cgggaccggg cgccactaac ctggttaccg ggctcgcgac
     1081 tgcgcacatg gacaacagcc ctgtggtggc cattaccggg caggtatctc gcgcgatgat
     1141 cggacgggac gcgtttcagg agaccgatat catcggcgtc acgcaaccga tcaccaagca
     1201 caatcgactg gtggaagaca tcgatgagct agaggaagca gtcgcggagg cgttcttcgt
     1261 ggcggcgaac ggccggcccg ggccggtgct gctggacatt cccaaggacg ttcagacggc
     1321 gaaggccgag tggcggggcg gagaaactat ccatcgtggc gaccgagcgc agaaccctgc
     1381 cggtctgccg aatgaagacc ccgtccaaga cgcgatcgct ctgattgcgg cagccgagcg
     1441 tccgctgatc atggcggggc atggtgtctt gctggcggag gcgaccgatg agctcaggac
     1501 gttggcggag cgcaccggca ttccggtgat cacgacgctg ctcggaatca gcgcctttcc
     1561 agcctcccac ccgctccacc tcggcatgcc tggtatgcac ggcgaggtgc acgtaaaccg
     1621 ggccatccag caggcagacc tgatcatcgg attgggactt cgcttcgacg atcgggtcac
     1681 cggcaacctc gc
//
LOCUS       DASRPQ010002460         2596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_310155, whole genome shotgun sequence.
ACCESSION   DASRPQ010002460 DASRPQ010000000
VERSION     DASRPQ010002460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2596
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310155"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..547)
                     /locus_tag="VFD73_27590"
     CDS             complement(<1..547)
                     /locus_tag="VFD73_27590"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZI77735.1"
                     /translation="MTVRPQILLVDDEANIRRMLGALLQSEGFDVAEAANGNAALLLL
                     NDIDPDIVLLDLLMPPGPDGLETLTKMRERGALAPVIMMSGKAQLTDAVRAVKQGAFQ
                     FLEKPLSPEAVLVTVRAALELNQTRAENRALHAELARRGSLVGSGRAMQQVRELIARV
                     GPTEARVLITGESGTGKELVAA"
     gene            complement(544..1731)
                     /locus_tag="VFD73_27595"
     CDS             complement(544..1731)
                     /locus_tag="VFD73_27595"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HZI77736.1"
                     /translation="MRLSFHQRILLILICLGALPTALAFLGWGLTVRSSTRAPGAQSA
                     IEDVAASGRSLLRTIDSTRLQPEERRALADHASKLNTAIGQFQRADTFNRYYYAGLGL
                     LILLVGCAFLYASIQFGGHLSRQLSRPIEELIGWTGNIRRMEPLPPDRPRRGAPEFAA
                     LRTALREMAEGLERARAQEIESERLRAFRETARRVAHEMRNPLTPIRLAVAHLAQVTG
                     AEHREAIEVLKAESERLEQLAREFTAFGRLPEGPAAPVDFTELLAELARTSLPSTMKA
                     RLDLDPATPVLLGHYDPLRRAFSNLLRNAAEACEEQGELEIAAAPENGGGVRIEIRDH
                     GPGVPASVADRIFDPYWTGKPDGTGLGLALVKQTIEMHGGTISLAETPGGGATFVVRM
                     SRQ"
     gene            complement(1698..>2596)
                     /locus_tag="VFD73_27600"
     CDS             complement(1698..>2596)
                     /locus_tag="VFD73_27600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77737.1"
                     /translation="WPSLVRPTKPQALRLAAGGSMLWLILQSGTAYLLRPSDIAGPYL
                     SEWIPYKAGRRPFNGSVNFAAVAGLPVPEGVHPDYPELSRRLRSGNIEAELALTSRDV
                     QPHWSSVFQLFGKNGSVMLVEAFERSLVFQPPARAQLLRLNRPRVMIRDALNPGSGSE
                     VRFAAGERHDTLWASVRRGATVWQVSQALSPSLGWALISPFNYELGRESRMVTFLYLV
                     FLLAPIGYWWKSFRSMPGWLMASSGVLIVGLLGIPLILGYPPVHWSEWLGGLAGIALG
                     SGLHSDPYLGKRCDSPSIRESC"
BASE COUNT          466 a          863 c          834 g          433 t
ORIGIN      
        1 cggcggccac cagctccttt ccggtgcctg actccccggt gatcagcacc ctggcttcag
       61 tcggccccac ccgagcgatc agctcgcgga cctgttgcat ggcgcgaccg cttcccacga
      121 gagacccgcg gcgcgccagc tcggcgtgaa gcgcgcgatt ttccgcccgg gtctggttga
      181 gctccagcgc ggcccggacc gttaccagga ccgcctccgg gctgagtggc ttttcgagaa
      241 actggaaggc accctgcttg accgcgcgaa ccgcgtcggt cagctgggcc ttgccgctca
      301 tcatgatcac cggagccagt gcaccgcgct cccgcatctt tgtgagtgtc tccaggccat
      361 cggggccggg tggcatcaag aggtcgagca aaacgatgtc gggatcgatg tcgttcaata
      421 ggaggagcgc cgcgttacca ttagccgcct cggcaacatc gaacccctcg gactgcagga
      481 gagcgccgag catgcgccga atgttggctt cgtcgtccac caacaggatc tgcggccgaa
      541 ccgtcactgg cggctcatcc gtaccacgaa ggtggccccg cctcccggtg tctcggccag
      601 gctgatggtt cctccatgca tttcgatggt ttgcttgacc agcgcaagtc ccagcccggt
      661 gccgtccggc tttccggtcc agtatgggtc gaagatgcgg tcagccacgg acgccgggac
      721 cccgggtccg tgatctctga tctcgatgcg taccccgccc ccgttttccg gcgcggcggc
      781 gatctcgagc tcgccctgtt cctcgcacgc ttccgccgcg ttccgaagca ggttgctgaa
      841 cgcgcgccgc agcggatcgt agtgtcccag aagcactggc gtggcgggat cgagatcgag
      901 ccgagccttc atggtggacg gcagggacgt gcgcgccagc tcggccagga gctcggtgaa
      961 atcaaccggc gcagccggtc cctcgggcag ccggccgaac gcggtgaact cgcgggcgag
     1021 ttgctccagc cgctcggact cggccttcag gacctcgatg gcttcccggt gttccgctcc
     1081 ggtaacctgc gccagatgag ccacagcgag ccggatcggg gtgagcgggt tccgcatctc
     1141 gtgggcgacc cgacgtgccg tctcacggaa tgcgcgcagg cgctcactct cgatctcctg
     1201 cgcccgggca cgctccagtc cctcggccat ctcgcgcagg gcggtgcgga gtgccgcaaa
     1261 ctccggcgcg cctctgcggg gacggtcggg agggagtggc tccattcggc gaatgttgcc
     1321 agtccagccg atcagctcct cgatcggcct gctgagttga cgcgagagat ggccgccaaa
     1381 ctggatcgag gcgtacagga aagcgcatcc caccaggagt atgagtaagc caagtcccgc
     1441 gtagtagtac cggttgaagg tgtcggcccg ctgaaactgg ccgatcgcgg tgttgagctt
     1501 gctggcgtgg tcggccaacg cccggcgctc ttccggttgc agccgggtgg agtcgatcgt
     1561 ccggagcaga gaccgacccg aagcggcaac gtcctcgatg gcactttgcg cccccggtgc
     1621 gcgcgtgctg gaccggaccg tgagacccca gccgagaaac gcgagcgccg taggcagcgc
     1681 gcccagacag atgaggatca gcaggattct ctgatggaag gagagtcgca tctctttcca
     1741 agataagggt cactgtggag gccggagccg agtgcaatac cggccagtcc acccagccat
     1801 tcggaccagt gcaccggtgg atagccaagg atcaaaggga tgccgagcag cccaacgatc
     1861 aggacaccgc tgctggccat gagccagccc ggcatcgacc ggaagctctt ccaccagtag
     1921 ccgatcgggg caaggaggaa gaccagatac aagaaggtga ccatccggga ttcccggccc
     1981 agctcgtagt tgaaggggga gatcagggcc cagccaagac tcggactgag tgcttgactg
     2041 acctgccaca ccgtcgctcc ccggcgaacg ctggcccaca gggtatcgtg cctttcacct
     2101 gccgcgaatc tcacctcgga accgctgccc gggtttaaag cgtctcggat catcaccctg
     2161 ggtcggttga gtcgaaggag ctgagcccga gccggcggct gaaacacgag actccgctcg
     2221 aatgcctcga ccagcataac agagccgttc ttcccaaaga gctgaaagac ggaggaccaa
     2281 tgcggttgga cgtcccggga tgtcagagcc agctccgcct cgatgttgcc tgaccgcaac
     2341 cgccgggaga gttcggggta atctgggtgg accccctccg gaaccggcaa tcctgccacc
     2401 gccgcaaagt tcacgcttcc attgaacggg cgacgtccgg ccttgtaggg aatccactca
     2461 ctgaggtacg gaccggcaat gtccgacggc ctcagcaggt acgcggtccc actctgaagg
     2521 atcagccata gcatgcttcc tcccgcggcg agccgcaacg cttgcggctt cgtgggccgc
     2581 accagcgacg gccacc
//
LOCUS       DASRPQ010002461         2600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3118527, whole genome shotgun sequence.
ACCESSION   DASRPQ010002461 DASRPQ010000000
VERSION     DASRPQ010002461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2600
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3118527"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..1004
                     /locus_tag="VFD73_27605"
     CDS             141..1004
                     /locus_tag="VFD73_27605"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HZI77738.1"
                     /translation="MTGLAWMALAQLLFAGMNVCTRLSARDLPWPEIAAVRFLVGAII
                     AILVARRSRSPLLVRDRRSAWRRSGYGTLAAVCAFYALGSSRIALGDVATLGATAPIF
                     VALLSRPLLSEPVDGWVSVAVALGFAGVVAVVRPSFAVAVPVALIAALGAAFYALAMI
                     WLRKMGPAESHEAVVLHFSLVALGTFLVLAVPVWHSPDWKSGLYLVGAGIGGGGAQIA
                     MTRAYALHRAAPVTALSGLGVVLTYLFAIPALGDQPNPWQMAGSLLVIAAGVLLAVSS
                     KPRPLVARAST"
     gene            1001..1654
                     /locus_tag="VFD73_27610"
     CDS             1001..1654
                     /locus_tag="VFD73_27610"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77739.1"
                     /translation="MSATGVVVRADGLGYDPDLARAHLIEADPRLGELMIRVGEFTMR
                     PRADHSLFAALMRSIVYQQLTGKAASTILQRVIRTSTRRRFPTPRELLLVSPESLRQA
                     GLSAAKTAAVRDLAEKTIDGTVPSLARIRRMSDEEILQRLTLVRGIGPWTVEMLLIFR
                     LGRPDVFPVSDLGVRKGFGQVFLKGKLPDPAVMRRRAERWRPYRSMASWYLWRALEL"
     gene            1651..>2600
                     /locus_tag="VFD73_27615"
     CDS             1651..>2600
                     /locus_tag="VFD73_27615"
                     /inference="COORDINATES: protein motif:HMM:NF025755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-transfer associated ATP-grasp
                     domain-containing protein"
                     /protein_id="HZI77740.1"
                     /translation="MSVLRPLRRFRLIDKGVRRLLWVRETWDAAQSVRDRRGLGTFQI
                     LAEQLRLYQRYGLDQYAYFWYRLFEKSLPYTEKIRYLPDSVAANARLWSLLTPECYRS
                     LFDNKLVFSRFFGPLGLPVARIYGVYDPEVGATATGEPLRSAADLRECILRHGDEGFV
                     FKPVEGIQGNNILVFVGRAEEDTLLTLGGERYDAEALVQFAGNSSRLEEHNPGANPVP
                     FLLEERIRPHPRLADFIGPTLCSVRVQTLIARHGKPEIIAAVFKLQPGVSGVDQLVHG
                     AVGCWVDLDTGRLGRGRSRSSWEDITVIPGTDTPFAGFQLP"
BASE COUNT          379 a          838 c          815 g          568 t
ORIGIN      
        1 gtcgggacgc atgagagctc gaagatacta ctttattgaa tggcacttct tctcctgcgc
       61 cgggtccggc tcttccgctc cttccgcggt ttccgcctcg tccgcccttt ccgctctttc
      121 cgcctgttcc gctcctttac gtgaccggtc ttgcctggat ggccctggcc cagctgttgt
      181 tcgccggaat gaacgtctgc acccgtctga gcgcccgcga ccttccctgg cccgagatag
      241 cggctgtgcg ctttctcgtc ggtgcaatca tcgccatcct cgtggcgcgc cgaagcagaa
      301 gcccgctctt ggttcgggac cggcgcagcg cctggcgacg gagcggctac ggaacccttg
      361 ccgcggtgtg cgccttctac gctctgggct ccagccgtat cgcgctaggc gacgtggcca
      421 ccttgggtgc taccgcgccg atcttcgtcg cgttgctctc tcgtccgctt ctctccgaac
      481 cggttgacgg ctgggtgagc gtcgctgtgg ccctcggttt cgccggtgtc gtggcggtcg
      541 tacggccgtc attcgcagtc gccgttccgg ttgcgctgat cgcagcgctg ggcgccgcat
      601 tctatgcact ggcgatgatc tggcttcgca agatgggtcc cgccgaaagc cacgaggcgg
      661 tggtgctgca tttctccctg gttgccctgg ggacattcct ggtgcttgct gttcccgttt
      721 ggcactcgcc cgattggaag agtggtctct atctcgtcgg tgccggcatc ggcggagggg
      781 gtgcgcagat cgccatgacg agagcgtatg cgctgcaccg tgccgcacca gtgacggcgt
      841 tgtccggact cggcgtggtg ctgacctatc tgttcgcgat ccctgccctg ggcgaccagc
      901 caaacccatg gcagatggcc ggctcactcc tggtgatcgc cgccggagtg ctgctggccg
      961 tcagcagcaa gccacgtccg ctcgtggccc gagcgtcgac gtgagtgcca ccggcgtcgt
     1021 tgtaagagcc gacgggctcg gctacgatcc cgatctcgcc cgtgcccatc tgatcgaggc
     1081 agatccccgc ttgggtgagc tgatgatccg ggtcggcgag ttcaccatgc ggccccgagc
     1141 cgatcacagt ctctttgctg ccttgatgcg ttccattgta tatcagcagc tcaccggtaa
     1201 ggccgcctcg accatcttgc agcgggtgat ccgcaccagc accaggcgtc gtttccccac
     1261 cccacgggag ctcctgctgg tctcgcccga gagtctcagg caggccggcc tctccgcagc
     1321 caagaccgct gccgtgcgcg accttgccga gaagactatc gatgggacgg tgccctcact
     1381 cgcccggatt cgccggatga gcgatgagga aatcctgcag cggcttacgc tggttcgcgg
     1441 aattggaccc tggactgtag agatgctgct gatttttcgg ctgggccggc ccgatgtttt
     1501 tcccgtctcc gacctgggcg tccgaaaggg gttcggacag gtgtttctga agggaaagct
     1561 tccggatccc gctgtgatgc ggcgtcgagc cgagcgttgg cggccctatc gtagcatggc
     1621 aagctggtat ctctggcgcg ctctggagct atgagcgttc ttcgccctct ccgcaggttc
     1681 cgtctgatcg ataaaggagt gaggcggctg ctctgggtca gagaaacctg ggatgccgcg
     1741 caatccgtcc gcgatcgtcg cggacttggc accttccaaa tcctggcgga gcagttgcgg
     1801 ctgtaccaac ggtacggcct ggaccagtac gcctactttt ggtatcgact gttcgagaag
     1861 tccctgcctt acaccgaaaa gatccgctat ctgcccgaca gtgtcgccgc caacgcccga
     1921 ctgtggagtc tgctcactcc agagtgctat cgctctctct tcgacaacaa gcttgtcttc
     1981 agtcgtttct tcggccctct aggcttgccg gtcgcgcgga tctacggcgt gtacgatccc
     2041 gaggtgggcg ccactgccac cggcgaacca ctccggtcgg ctgcggacct gcgagagtgt
     2101 atcctgagac atggcgacga ggggtttgtc ttcaagccgg tcgaaggaat ccagggcaac
     2161 aacattctcg tgtttgtcgg gcgggcggag gaggacacct tgctcaccct cgggggcgag
     2221 cgctacgacg ccgaagcgct ggttcagttc gcgggcaata gctcacggtt ggaggagcac
     2281 aatcccggcg ccaatccggt gccgtttctt ttggaggagc gcatccgtcc tcacccgcgc
     2341 ctggccgact tcatcggacc gacgctctgt tcggtccggg ttcagacctt gatcgcacga
     2401 catggcaagc cggagattat cgccgcggtc ttcaagctgc agcccggtgt gtctggcgtc
     2461 gatcaattgg tccatggcgc agtgggctgc tgggtcgacc tcgacaccgg gcgtttggga
     2521 cgtgggcgca gccgatccag ttgggaggac atcactgtga ttccgggcac cgacacccct
     2581 tttgccggct tccagcttcc
//
LOCUS       DASRPQ010002462         2201 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_611849, whole genome shotgun sequence.
ACCESSION   DASRPQ010002462 DASRPQ010000000
VERSION     DASRPQ010002462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_611849"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(136..615)
                     /locus_tag="VFD73_27620"
     CDS             complement(136..615)
                     /locus_tag="VFD73_27620"
                     /inference="COORDINATES: protein motif:HMM:NF037735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD domain-containing protein"
                     /protein_id="HZI77741.1"
                     /translation="MTSSLPLLLLDVDGVLNPFAAPACPPGYTEHEFFPGEEPVRLCR
                     AHGPWLQELATRFQIVWATAWGADANRFLAPLLQIPDLPVIRFPPVPFHPRDKLPPVI
                     RYAGQHPLIWIDDALPPQAHAWAAKRRIPVLLIGIDPAEGLTRPVIEQSLRWADHLG"
     gene            complement(667..1206)
                     /locus_tag="VFD73_27625"
     CDS             complement(667..1206)
                     /locus_tag="VFD73_27625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77742.1"
                     /translation="MTRIMRDSNRPAAIPVPGTELVAGYVNGTFKWHPDEFARFHGIP
                     HVHIDIFGGDPEEAGVLDVEPKCAPVDAAPPWAKRRKALFPGGYPPVIYCNRSTLTPL
                     FNAMNAAGLEIVRDFRIWIATLDGTKRVHDMTGVTAVQHKRAPKEDPHGNPLEPSSDS
                     VTSGHFDESIVYDDNWHRH"
     gene            complement(1543..1860)
                     /locus_tag="VFD73_27630"
     CDS             complement(1543..1860)
                     /locus_tag="VFD73_27630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77743.1"
                     /translation="MSAGPRAELCGYWAQTVRRPLWWLNPVIADLGLTSMARGRHALQ
                     TGQLLTKTQAIERAHAPAWLKDQLRARRRGQRIASPRIRTALIAWQDARRTVAGARRA
                     APD"
     gene            1919..>2201
                     /locus_tag="VFD73_27635"
     CDS             1919..>2201
                     /locus_tag="VFD73_27635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77744.1"
                     /translation="MPDHLGPRHPGQAALDKRAVGPRRVQRPEVGQPARIDVDAPEVE
                     SVSSLAVQLAVQASQHLLPRRPDRPSGQGHQVQITDTGDVIPRGQGPGHQ"
BASE COUNT          380 a          706 c          706 g          409 t
ORIGIN      
        1 cacgatccta gcccgaacca cccaggaaat accggaacga cacgctaatt tcgtggctac
       61 atccagtagc cgcgaacgca aaaacttcag catgtcagag cagcaatctc tacgcagagt
      121 tacagcaact tcggtttagc cgagatgatc ggcccatcgc agggattgtt ctatgactgg
      181 gcgggtgagt ccttcggctg ggtcgatgcc gatgagcagg actggtatgc gtcgtttggc
      241 ggcccatgcg tgtgcctggg gcgggagcgc gtcgtcgatc cagatcagcg ggtgctgccc
      301 ggcgtatctg atgacggggg gaagcttgtc gcggggatgg aaggggaccg gcgggaagcg
      361 gatcacgggc aggtcgggga tctggagcag gggggcgagg aaccggttgg cgtcggcgcc
      421 ccatgcggta gcccacacga tctggaaccg ggtggcgagt tcctgcagcc atggcccgtg
      481 cgcccggcac agccgtactg gttcttcgcc ggggaagaac tcgtgttcgg tgtagccggg
      541 cgggcaggcc ggtgctgcga acgggttcag aactccgtcc acgtcgagca ggagcagggg
      601 gaggctggag gtcactgtcc gttgatcgtg ccgccgccag tccgggctgg caagaacttg
      661 cccaggctaa tgacgatgcc agttgtcgtc gtacacgatc gattcatcga aatgacctga
      721 ggttacgctg tcgctagatg gctctagcgg gttaccgtga ggatcctctt tcggagctcg
      781 cttatgctgt acggcggtaa ccccggtcat atcatgaacc cgctttgtgc cgtccagggt
      841 cgcaatccag attcggaaat cccgcactat ctcgaggcct gccgcgttca tcgcgttgaa
      901 caacggcgtg agcgtgctgc ggttacaata gatgactggt ggatatccgc ccgggaacag
      961 tgccttccgt cgcttggccc atggcggggc cgcgtcgacg ggcgcgcact ttggttcgac
     1021 gtcgagtaca cccgcctctt caggatcccc gccgaagata tctatgtgga cgtgcggtat
     1081 cccgtggaat ctggcgaact cgtcagggtg ccatttgaac gtcccgttga cgtatccagc
     1141 gacgagttcc gtaccgggga cgggaatggc cgcgggcctg ttgctatccc gcatgatcct
     1201 tgtcactatt accccccctt accccttcgt tggctctaca ctgaccgtag gccgggatac
     1261 cggcaagtga tttgacataa cggtttgata acgaacgctc gctttcctgg tcaattttga
     1321 ccgcaagata tatcggagat tattgcgtat cgtcattagg tcgtgatttg ggcactgcct
     1381 gaatgcccag tcagcatcac tgacctcctc gatatgccca cttaacacga gcggcctcat
     1441 ttcgcaatac agcacagaag tacactcgcg gacttccacg tatcctggcg cacttgttct
     1501 cgcaggtccc tgctaaacga tccggtttcc gggcgcgtgc cttcagtccg gcgccgcgcg
     1561 gcgtgcgccg gctacggtgc gccgtgcgtc ctgccatgcg atcagcgctg tccggatccg
     1621 gggcgaggcg atccgctggc cccgccgccg cgcgcggagc tggtctttca gccaggccgg
     1681 cgcatgcgcc cgctcgatcg cctgggtctt ggtcagcagc tgccccgtct gcagggcgtg
     1741 acggccccgg gccatcgacg tcagccccag atcggcgatc accgggttca gccaccacag
     1801 cggccggcgt acggtctgcg cccagtaccc gcacagctcc gcgcgcggcc cggcggacat
     1861 cagcgtcggt catctccggt agcacggcgg cgggcggccg gcccaggaca gcgaacccgt
     1921 gccggaccat ctcggcccgc gtcaccccgg acaagctgcg ctggacaagc gagccgtggg
     1981 tccacgtcgg gtgcagcgcc ccgaggtcgg ccagccggcc cgcatcgacg tagacgcacc
     2041 cgaggtcgag tccgtgagca gcctcgccgt ccagctcgcg gtgcaggcca gccagcacct
     2101 cctgccgcgc cgccccgacc ggccctccgg tcaaggccac caggtccaga tcactgacac
     2161 cggggacgta atcccccgtg gccagggacc cggccaccag c
//
LOCUS       DASRPQ010002463         1077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4368633, whole genome shotgun sequence.
ACCESSION   DASRPQ010002463 DASRPQ010000000
VERSION     DASRPQ010002463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4368633"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            254..>1077
                     /locus_tag="VFD73_27640"
     CDS             254..>1077
                     /locus_tag="VFD73_27640"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HZI77745.1"
                     /translation="MPELSVVAPLYNESQNVQPLVEWILEALSTYAEPFEVILVDDGS
                     RDDTWHHIAAAAAAHPQVHGLRLGRNVGQTAAMMAGFDHSQGRVVVSLDGDLQNDPRD
                     IPMLVAKLEEGYDLVCGWRQQRQDKLILRKVPSWVANRIIRRLTGVAITDNGCSLKAY
                     RRDLLDRISLYAEQHRFIPALSASVGARITELPVRHHARRFGESKYGISRTVKVLVDL
                     ITLKMITTFRSRPLVGFVMASVPLVGAALVFGLAWIWAATHFEPLKAEAVVFPGAAL"
BASE COUNT          181 a          357 c          346 g          193 t
ORIGIN      
        1 aagaccatcc ccgtcgtcct cctccgccgc ggcgggtggt gacccacccg gactgttgcg
       61 cctgagcacc agcatcgcaa aattcgcgat ccccagcctg atagctcgtc cgactgccat
      121 cctacaagcc attgcttagc aacgtattat gccacatcgc ccggccggtg cggtgcggaa
      181 cagccattgc tggaagcggg gcgcgcaggg gcctatgttt gagagtggtc atccggaggg
      241 gaaacgagcg accatgcccg agttgtccgt agtcgcgcca ctctacaacg aatcgcagaa
      301 cgtgcagccc ttggtggagt ggatcctcga ggcgctctcg acctatgcgg aacccttcga
      361 ggtgatcctg gtcgatgacg ggagccgcga cgacacttgg caccacatcg cggcagccgc
      421 cgcggctcat ccccaagtgc acgggctccg gctgggtcgc aatgtgggcc agaccgccgc
      481 catgatggcc gggttcgatc actctcaagg gcgcgtcgtg gtaagcctcg atggcgattt
      541 gcagaacgat ccgcgcgaca tcccgatgct cgtggcaaag ctcgaggagg gttacgatct
      601 ggtctgcggg tggcgccagc agcggcagga caagctgatc cttcggaagg tcccctcctg
      661 ggtggccaac cggatcattc gccggctcac gggcgtcgcg atcactgaca acggctgctc
      721 gctcaaggca taccggcgcg acctgctgga ccggatctcg ctctacgccg aacagcaccg
      781 cttcatcccc gcgctgtcgg ccagcgtggg cgcgcggatt acggagctgc ccgtgcgcca
      841 ccatgccagg cgattcggcg agagcaagta cggcatcagc cggaccgtca aggtgctggt
      901 ggatctgatc acgctgaaga tgatcaccac cttccgctcc cggccgctgg taggcttcgt
      961 gatggcctcg gtgccgctgg ttggcgctgc gctggtgttc ggcctggcct ggatctgggc
     1021 cgctacccac ttcgagcctc tcaaggccga ggcggtggtg ttccccggcg ccgccct
//
LOCUS       DASRPQ010002464         1587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4369086, whole genome shotgun sequence.
ACCESSION   DASRPQ010002464 DASRPQ010000000
VERSION     DASRPQ010002464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4369086"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..197)
                     /locus_tag="VFD73_27645"
     CDS             complement(<1..197)
                     /locus_tag="VFD73_27645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77746.1"
                     /translation="MSSALAGPDAPIETKLHPPGVRAEWVERSVLIDELTQTTAKLVL
                     VDAPAGFGKTTLVAQWRSSAA"
     gene            480..728
                     /locus_tag="VFD73_27650"
     CDS             480..728
                     /locus_tag="VFD73_27650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77747.1"
                     /translation="MPEEVAIAVTIGASAALIIIGAILRFGVTWQPAHVDLQVIGVIL
                     MVAGGLGLALSLLFMVIRRNDRRSAQVYEERRYNEPPM"
     gene            868..1365
                     /locus_tag="VFD73_27655"
     CDS             868..1365
                     /locus_tag="VFD73_27655"
                     /inference="COORDINATES: protein motif:HMM:NF018590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1269 domain-containing protein"
                     /protein_id="HZI77748.1"
                     /translation="MADLIAIGYSDEATGEAAAEEARRLARDLIIEPDAIASIVRDTE
                     GKYHVHTAHRPVGAGATWGMFWGLLFGLLFFIPVFGMAVGAGLGALMGKVTKSGIDRE
                     FQDQVRGMLQPGTSALFLMVEKITPDKATEALSKYGGTVLKTSLSKEGEAELQEALHG
                     GAAAQ"
BASE COUNT          267 a          492 c          536 g          292 t
ORIGIN      
        1 tccgccgcgc tggaccgcca ctgcgcgacg agggtggtct tgccgaaccc ggccggcgcg
       61 tccaccagca ccagcttcgc ggtggtctgt gtcagttcgt cgatgagtac cgaccgctcc
      121 acccactcgg cccggacgcc cggcggatgg agcttggtct cgatcggggc atccggccca
      181 gccagggcag aggacatcgc aggataagcg ccaaggcctt gccccggttg ccctcctgtg
      241 ccgagccggc cgccatggtg cactccgttg agggtaataa acgaaccagg ctttggccag
      301 gaatgatgtt ccgtgtccct tccaagccat tccgcgaggc acgggtgcgg gcatcactag
      361 cccggtacgc gagttatata acggacagtt aagcctcgtc gctttgagtt acctggctgg
      421 catgcagagt cacccggagc gggcgaggcg gcccgcggct ttccccgtca ccctggaagg
      481 tgcccgagga ggtggcaatt gcggtgacga tcggtgccag cgccgccctc atcattatcg
      541 gcgcgattct ccggttcggc gtgacctggc agcccgcgca tgtggatctc caagtcatcg
      601 gggtgatcct catggtcgcc ggggggctcg gcctggctct ttccctgctc ttcatggtga
      661 tcaggcgcaa cgaccgccgc tcggcacagg tgtacgagga gcggcggtac aacgagcctc
      721 caatgtgact catgggcccc gggggcgcct ggtcacctgg ggcggtgcca gcagggcggt
      781 atcacccgcc gggggtggag cagtactgct cgcgggcttg tatgaactgg gccggattcg
      841 attcaagaag aaggagaaag aggcgtcatg gctgacttga ttgccatcgg ctactccgat
      901 gaggccacgg gcgaggccgc cgccgaggag gcgcgaaggc tcgcgcggga cctcatcatc
      961 gaacccgatg cgatcgcatc aatcgtccgg gacacggagg gcaagtacca cgtgcacacg
     1021 gcccaccgcc cggtgggcgc cggtgcgacg tggggcatgt tctggggcct gctgttcggc
     1081 ctgctgttct tcatcccggt gttcggcatg gccgtgggcg cgggccttgg tgccctcatg
     1141 ggcaaggtca ccaagtcggg gatcgaccgg gagttccagg accaggtgcg cggcatgctg
     1201 cagccgggaa cgtcggcgct gttcctgatg gtggagaaga tcacgccgga caaggccacc
     1261 gaggcgctga gcaagtacgg tggcaccgtg ctgaagacct cgctgtccaa ggaaggcgag
     1321 gccgagctcc aggaagccct gcacggtggg gctgccgccc agtaaggacc agtgtttcgg
     1381 gggccatttc tcatggcttg agtttccgcg gtgcacgctc cccacgtctt tcgcgatacg
     1441 cgccccgggc gatttccgag cgcgccaccg atcacaattc ccgctctcac agttagcgat
     1501 ccgctgccct tcttatgggc catatacggg atggatgtca tgaaatgaac ggatggtata
     1561 tcggtctagg aatcctgtac ctagttt
//
LOCUS       DASRPQ010002465         1247 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4065057, whole genome shotgun sequence.
ACCESSION   DASRPQ010002465 DASRPQ010000000
VERSION     DASRPQ010002465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4065057"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            425..769
                     /locus_tag="VFD73_27660"
     CDS             425..769
                     /locus_tag="VFD73_27660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77749.1"
                     /translation="MSAALIQASSRQPAASLARAYPAASCVLPAWHPGDHVHQRRLRS
                     AAIELRQRLCPQPGTWRLPRDSAHDQRSASRVRYVSHLLLHVEVGLVPGDGGYRHLYT
                     RPIWVKLAAAPG"
BASE COUNT          208 a          420 c          384 g          235 t
ORIGIN      
        1 ccgcaaccgc tccaggtacg tcccgtagct gagctgctgg ccggtgatca tcgcggcggc
       61 ctgagccagc gccagcggta gataccccag ctcggcggcc tcctcgtcgt ctgccagggc
      121 ggtcggctcg gcgaggaacg cccgcgcttc ctcagaagta aacacgtcga caggaacgcg
      181 ctcccaaatc tgctaccgat gggcggtcac tggctaccag cacatgggcc gcaccgtcag
      241 ccggaacgaa aggccggagc agatcgcaat ctgttgcgtt atcgaagacg agcaggcagc
      301 ggtccccgtc tgtcccagcc accgccggac gaccgggccc aggtcaccgg agtcctgccc
      361 agcgccgtcc gccgacagcc ccatggcgtc ggccaccgcg cccaggccag cgagcagggt
      421 cctgatgtcc gcggcgttga tccaggccag cagccgccag cccgccgcca gtctggcccg
      481 tgcgtacccg gctgccagct gtgtcttgcc cgcctggcat cccggtgacc acgtgcacca
      541 gcggcgcctc cgcagcgccg ctatcgagct tcgccagcgc ctctgcccgc agccgggaac
      601 ctggcggctc ccccgggata gcgcccacga tcagaggtcg gccagcaggg tccggtacgt
      661 ctcgcatctc ttgttgcatg tcgaggtcgg cctggtgcct ggagacggcg gctacaggca
      721 cctatatacc cggcccatct gggtcaaact ggccgccgcc cctggatgat gacctccctg
      781 cacctctgcg gtggcaagaa cgcgcgcggc taggttcggc tcgcctgacc gccggcgaag
      841 cgctcaccgc acgatgagga gcgactgtcg agtcgtgcga aagtatttgt atacgatgtt
      901 ctagttattt atcgatgttc atgttcgcca tgaggttata tttcacccgt tcatgcaaat
      961 ttcatcgact cggctgttga aacctgcagg cctatagacg atcctggtgt cttgcgtatc
     1021 ccgaccgggt tggtcgggcc ttctgccgct ttgacggtat acagggaggt cggtgggctc
     1081 gccactgcct ccagcctgat atgagtcgtc gagcccagag tgggggggct ttcgatgata
     1141 agttcaaatc gtttgcacca gcctgatcaa gtttccgtgt ggcgccggct ttccgttacg
     1201 ccgggcctga gacagcagtc gcctgcaaga cctgaaaggt gttctct
//
LOCUS       DASRPQ010002466         1150 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_311593, whole genome shotgun sequence.
ACCESSION   DASRPQ010002466 DASRPQ010000000
VERSION     DASRPQ010002466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_311593"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..242
                     /locus_tag="VFD73_27665"
     CDS             <1..242
                     /locus_tag="VFD73_27665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77750.1"
                     /translation="PAPDGGSPGAFDALAKSPCTGRWDPAVIRATLTATVGQATTVHR
                     RGTPLDEDRVMELWRSHRRRAGRATPPAGVLGCGR"
     gene            complement(396..824)
                     /locus_tag="VFD73_27670"
     CDS             complement(396..824)
                     /locus_tag="VFD73_27670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77751.1"
                     /translation="MDQILGQILRQAVWERLDMLDELANSADNGSLLSVARSELPRLT
                     HGWRALLASHAPDSRGRCPECSGHWRSRAASCSVWRAAHEHLISAETVPSQAVSAETT
                     ASGSLFSRLKANRSGWQVRQPASMFPAAIVAGAAGAAAAR"
BASE COUNT          214 a          365 c          393 g          178 t
ORIGIN      
        1 gtccggcgcc ggacggggga tctcccgggg ccttcgatgc actggcaaag tcaccatgca
       61 ccgggcggtg ggatccggca gtcatcagag caacgttgac ggcgacagtc ggtcaggcaa
      121 cgacggtgca ccggcgcggc actccactcg atgaagatcg agttatggaa ttgtggcgct
      181 cccaccggcg gcgcgcgggg cgtgcaacgc cgccggcagg agtgctcggt tgtggccggt
      241 gatccttcga catctcggtc gggggcacgg acgttcgccg gatcaccggc cacatggcgg
      301 ctgctcagcc ttcgtggatg ggggggaacc cacgaacagt gacgagtccg ccagctctat
      361 tgaattgtgg tggtggcggc agtagcaggc ggccgtcagc gcgcggcagc ggcccctgcg
      421 gcccctgcga cgattgccgc agggaacatg gatgccggct gacgcacctg ccacccgctt
      481 cgattggcct tgagccggga gaacagcgac ccggaggccg tagtttccgc ggagacggcc
      541 tgcgaaggca cggtctccgc ggaaatgagg tgctcatgtg cggctcgcca cacactgcac
      601 gacgccgcac gagatcgcca gtggcccgag cattccggac accggccccg agaatccggt
      661 gcatgggaag cgagcagagc ccgccaccca tgggtcaatc ggggcagctc actgcgtgcg
      721 accgacagca gagaaccatt gtcggcgctg tttgccagct cgtcgagcat gtcgagccgc
      781 tcccacacag cctgccggag gatctggccc agaatctggt ccacctcgca actccaccct
      841 tccgcgctcg gtttgcggga ctagaggttt gcgctccagc cgcatcccga gaactacagt
      901 cccgagaaag tcgccacaga cgatcgagta gtggcgctcg aacaaggtag gcagagcggg
      961 gggctggatt aaaccggcca tggggtgtgc tgcgctgatc ggccgtgcta tgacggtgag
     1021 cggcacattc tgataggcag cgccgatcag cttggccgaa gtgctcttca ccagcgacga
     1081 ccagcatgcc tactctgcac acgtcgcccg tcggacggca agggggcgag atgaacacga
     1141 ccggtcagca
//
LOCUS       DASRPQ010002467         1219 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_311771, whole genome shotgun sequence.
ACCESSION   DASRPQ010002467 DASRPQ010000000
VERSION     DASRPQ010002467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1219
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_311771"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(430..789)
                     /locus_tag="VFD73_27675"
     CDS             complement(430..789)
                     /locus_tag="VFD73_27675"
                     /inference="COORDINATES: protein motif:HMM:NF022700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3054 domain-containing protein"
                     /protein_id="HZI77752.1"
                     /translation="MRPVTGAVLDLCCVGAFVAIGRASHSEGDALAGLARTAWPFLAG
                     LAIGWLCTRAWRRPAALWPAGVGVWVSTVALGMVLRVVSGQGTAAAFIVVALAFLGLF
                     LLGWRLVASRFARSSLG"
     gene            862..>1219
                     /locus_tag="VFD73_27680"
     CDS             862..>1219
                     /locus_tag="VFD73_27680"
                     /inference="COORDINATES: protein motif:HMM:NF014218.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytosine permease"
                     /protein_id="HZI77753.1"
                     /translation="MTTTQQRTGGLEVRSIDYVPLSERHGKVWHLGPLWFMSNAQIAT
                     LAVGLISITEGASVFWSVLAIVVGMLIGTLFMAFHSAQGPQLGLPQMIQSRPQFGYLG
                     ALLVWLFAYLQYAGFNV"
BASE COUNT          228 a          400 c          375 g          216 t
ORIGIN      
        1 cggacaccac gggtgagtag ctttggttgc tctggctgtt tcggctctgg ttcaatgacg
       61 ggtcgaaatt cgatagcaca gtcagggcag cggttgaagt gctcgaccat ccagggttcc
      121 caactatgtt gggcgattcc agcgtcaatc ctgcgcattc ggatgttgtg gctgtcgcag
      181 agctcgcccc tgatccagcc gtgcttatgg caatgatcga agcctgtcct gacatacccg
      241 gaccgatctg gacaccaatc gcacgttccc aacagtgccg ggcggttctt cctcttgtac
      301 tggactagtc cattcagttt gacgtagctc atacgaacag tatacgaaaa agttttcgaa
      361 ccattccggg ggaaacgccg tgaaccaatg aatctgagtg aactgcatcc gagcgagagg
      421 ctgcccggat cagccaagag atgatctcgc aaatctgctg gcgaccaacc gccagcccag
      481 caggaacaac ccgaggaacg ccagcgccac cacgatgaaa gccgcggccg tgccctgccc
      541 ggacacgacc cgcagcacca tgcccagcgc gaccgtgctg acccatacgc cgacgccggc
      601 gggccagagc gcagcgggcc tccgccaggc gcgggtgcac agccagccga tggccaggcc
      661 ggccaggaac ggccatgcgg tccgggccag cccggcgagc gcatcgccct cgctgtggct
      721 ggcccggccg atggccacga acgctcccac gcagcacagg tcgagcaccg ctccggtcac
      781 cggtcgcatc cgctcacagt agccggacgt cggtgacgag ccggtattcc ctcacggaca
      841 atgtcacgtc agagtatgcg catgacaact acacagcagc gtacaggcgg ccttgaggtc
      901 cggtcgatcg actacgtgcc gctcagcgag cggcacggca aggtctggca cctggggccg
      961 ctgtggttca tgtcgaacgc gcagatcgcc acgctggcgg tcggcctcat cagcatcacc
     1021 gaaggcgcgt cggtgttctg gtcggtgctg gccatcgtgg tcggcatgct gatcggcacg
     1081 ctgttcatgg cgttccactc cgcgcagggc ccgcagctcg gcctgccgca gatgatccag
     1141 tcgcggccgc agttcgggta tctcggggcg ctgctcgtct ggctgttcgc ctacctgcag
     1201 tacgccggct tcaacgtgt
//
LOCUS       DASRPQ010002468         1487 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4369949, whole genome shotgun sequence.
ACCESSION   DASRPQ010002468 DASRPQ010000000
VERSION     DASRPQ010002468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1487
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4369949"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..858)
                     /locus_tag="VFD73_27685"
     CDS             complement(<1..858)
                     /locus_tag="VFD73_27685"
                     /inference="COORDINATES: protein motif:HMM:NF013357.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003796 - lysozyme activity [Evidence
                     IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA];
                     GO_process: GO:0016998 - cell wall macromolecule catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GH25 family lysozyme"
                     /protein_id="HZI77754.1"
                     /translation="MTVTLPDVSEFQSPASGNAPNWAGIKSQNGGAAIIRVGYGNSHL
                     DAMLGPNRSRIKSLKFGFCGLYQYLRAGQDVRSQANAFINWIGPNLNEGEIPILDLEE
                     GSGNQLGRANQWFGVIDDAYNLVSLPLSQRSWLYSGQSFAVDAGLAPIFHSARRTWIA
                     AYQASEAGLLPHTLWQSTNGQTGANRTNWSGCGFCDTSIYHGTLASLSDLGWHPPTQQ
                     SLLLAEEEMQIQNDKQYGAVAFGGGQFRWISFFCDPGGEGKTPNRLRVAPFSNDTQDF
                     ANITIVTVGP"
     gene            complement(957..1121)
                     /locus_tag="VFD73_27690"
     CDS             complement(957..1121)
                     /locus_tag="VFD73_27690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77755.1"
                     /translation="MTFTALFAFLLGGHQPFAYITHRMIDVGIGVATADPDCGLQAWP
                     RHDRQLTVGR"
     gene            complement(1249..1386)
                     /locus_tag="VFD73_27695"
     CDS             complement(1249..1386)
                     /locus_tag="VFD73_27695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77756.1"
                     /translation="MDHRDVERLRRARDLLAVQGFDTRNALLSCYSGAGFSDGLRAAS
                     A"
BASE COUNT          264 a          498 c          462 g          263 t
ORIGIN      
        1 cgggccgacg gtcacgatcg tgatattggc gaaatcctgg gtgtcgttgg agaacggagc
       61 cacccgcagc cgattcgggg tcttgccttc gccgccgggg tcgcagaaaa aggagatcca
      121 cctgaattgg cccccgccga aggcaacggc accgtactgc ttgtcgttct ggatctgcat
      181 ttcttcctcc gcgaggagca ggctctgttg agtcggggga tgccagccca gatctgacag
      241 gctggcgaga gtgccgtggt agatggacgt atcgcagaaa ccgcagccgc tccagttcgt
      301 ccggttcgcg ccggtctggc cgttggtgct ctgccacagg gtgtgcggca gcagtccggc
      361 ctcggaagcc tggtacgccg ctatccaggt acggcgggct gagtggaaga tgggcgcgag
      421 cccggcgtcg accgcgaaag actggccgct atacaaccag gaacgctggc tgagcggcaa
      481 cgatacgagg ttgtaggcgt catcaattac gccgaaccac tggttagccc ggcccaactg
      541 gtttcccgac ccctcttcca gatcgagtat gggaatctcg ccctcgttaa ggttcgggcc
      601 aatccagttg atgaacgcat tggcttgcga tcgtacatcc tgacccgctc gcaggtattg
      661 gtacaagcca cagaacccga acttgagcga tttgattctc gaccggttcg gcccgagcat
      721 tgcgtcaagg tgagaattcc cgtacccgac tcgaatgatc gccgccccgc cgttctggga
      781 tttgatcccc gcccagttgg gggcgttgcc gctggccggc gactgaaact cgctgacatc
      841 cggcagcgtg accgtcattc cccttccctc cctgctttcc cggtgacagt cgccaggcta
      901 gatcctcggt accggcggca ccccgcaaac cggacactcg cccgccccgg tcgcgcttac
      961 cggcccacgg tcagctggcg gtcgtgccgc ggccaggcct gcaggccgca gtccggatcg
     1021 gcggtcgcca cgccgatgcc cacgtcgatc atccggtgcg tgatgtaggc aaacggctgg
     1081 tggccgccca gcagaaacgc gaacagcgcg gtgaaggtca cctgaggact ctgatccccc
     1141 agccggtgcc agccgctgac cagcaccccg gctatgacga cgacagcgat gcccgcgatc
     1201 ccaggtccca gctaccccgg aatctgtcca agccacctcg cgacggcctt atgcgctagc
     1261 cgctcgcagc ccgtcgctga agcctgcacc ggaatagcag ctgagcagcg cgttcctggt
     1321 gtcgaatccc tggacggcga gcaggtcccg ggcccggcgc aggcgttcga cgtcgcggtg
     1381 gtccatggtc ctgtcccact tagctcatac cttgcgccag cgggcctcgc acaggccgta
     1441 gataccgaag atcgccaggc ccagcgcggc cagcagcatc aggaact
//
LOCUS       DASRPQ010002469         1309 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_613458, whole genome shotgun sequence.
ACCESSION   DASRPQ010002469 DASRPQ010000000
VERSION     DASRPQ010002469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_613458"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..419)
                     /locus_tag="VFD73_27700"
     CDS             complement(<1..419)
                     /locus_tag="VFD73_27700"
                     /inference="COORDINATES: protein motif:HMM:NF019156.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77757.1"
                     /translation="MASLIEKILRTGDKKTLRQLRNYADSINALEDSFKTFTDAELRE
                     ETDRLRARHQDGERLDDLLPEAFAAVREASSRTLGMRHFDVQLMGGAALHLGNIAEMK
                     TGEGKTLVATAPAYLNALTGKGVHVVTVNDYLAEYQS"
     gene            complement(519..>1309)
                     /locus_tag="VFD73_27705"
     CDS             complement(519..>1309)
                     /locus_tag="VFD73_27705"
                     /inference="COORDINATES: protein motif:HMM:NF017984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="crosslink repair DNA glycosylase YcaQ family
                     protein"
                     /protein_id="HZI77758.1"
                     /translation="ELTARIGHVEDRQAENWGWNWNAVKRVLEHLFEEGLVSAASRTA
                     QFERRYTLTSKVLPHLAAAASDGDAVAALRRLTDAAARAHGIGSVRCFADYFRIPVKA
                     TALAVEYLVEQGRLEPVTVAGWERKVFRHVDSVLPRQATGRALLSPFDSLVFERRRLF
                     ELFGFHYRIEIYTPEPKRRYGYYVLPFLLRDRMVARVDLKADRAAGRLLVRSAFAEPD
                     APPDTAVELVAELALMAQWLGLPDVEVEPAGDLAAAVAHGLARL"
BASE COUNT          214 a          419 c          435 g          241 t
ORIGIN      
        1 tcggactggt attcggcgag gtagtcgttg accgtgacca cgtggacgcc cttgccggta
       61 agggcattca ggtaggcggg agcggtcgcc accagggtct tgccttcacc ggtcttcatt
      121 tcagcgatgt tgcccaggtg cagggcggcg ccgcccatca gctggacgtc gaagtggcgc
      181 atgcccaagg tgcgggagga cgcttcacgc actgctgcga aggcctccgg aagcaggtcg
      241 tcgagcctct cgccgtcctg gtggcgggcg cggaggcggt ccgtctcctc gcgcagttcg
      301 gcgtcggtaa aggtcttgaa tgagtcttcg agggcgttga tggaatcggc atagttccgc
      361 agctgccgga gtgttttctt gtcacccgtg cggagaattt tttcgataag tgatgccacg
      421 tgaagatgct cccagtctga tgccgccgaa ttctggcgtg ttcagtctac gggagagaca
      481 cgcggccggt gccccttttc cctgagagcg gatactccct agagccgcgc cagcccgtgg
      541 gccacggcgg cggcaaggtc ccctgccggc tccacttcga cgtcgggcag gccaagccat
      601 tgggccatga gggccagctc agccacgagt tcgacggcgg tgtccggggg tgcgtccggc
      661 tcggcgaacg cggacctcac cagaagccgt ccggctgccc ggtccgcttt gaggtccacc
      721 cgtgccacca tcctgtcgcg cagcaggaaa gggagcacgt agtagccgta gcgccgcttg
      781 ggctccgggg tgtagatctc gatccggtaa tggaacccaa agagttcgaa caggcgccgc
      841 cgctcaaaga ccagggaatc gaacgggctc agcagtgcac gcccggtggc ctgccgcggc
      901 agcacggaat ccacgtgccg gaacaccttc cgttcccagc cggccacggt gacgggctcc
      961 aacctgccct gctccaccag atactcaacg gccagcgccg ttgccttgac cggaatccgg
     1021 aagtaatcgg cgaagcagcg gacgctgccg ataccgtgtg cccgggctgc cgcgtcggtc
     1081 aggcggcgga gtgcggccac ggcatcaccg tccgatgccg ctgccgccag gtgtgggagg
     1141 actttggagg tcagcgtgta ccggcgttcg aactgggcgg tcctggaagc ggccgatacc
     1201 agtccttctt cgaagaggtg ctccaggacg cgctttacgg cgttccagtt ccacccccag
     1261 ttctccgcct gtctatcttc gacatgcccg atccgtgccg tcagttccg
//
LOCUS       DASRPQ010002470         2316 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_930305, whole genome shotgun sequence.
ACCESSION   DASRPQ010002470 DASRPQ010000000
VERSION     DASRPQ010002470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2316
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_930305"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(36..107)
                     /locus_tag="VFD73_27710"
     tRNA            complement(36..107)
                     /locus_tag="VFD73_27710"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(73..75),aa:Gly,seq:ccc)
     gene            complement(167..1099)
                     /locus_tag="VFD73_27715"
     CDS             complement(167..1099)
                     /locus_tag="VFD73_27715"
                     /EC_number="1.14.16.1"
                     /inference="COORDINATES: protein motif:HMM:NF008877.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine 4-monooxygenase"
                     /protein_id="HZI77759.1"
                     /translation="MATVQGEPVAGSGLTTTKAPFIEQAQLEGRLYIHQPYELYSEAN
                     HEAWRKLFARMEDRWRRYANHRFLQGIDSLCLEPTRVPRLEDVNRFLSPLTGFKAKAV
                     SGYIPSFLFFNSLRSREFPTTITIRDGATLDYLPEPDIFHDIAGHVPMHTDRAFADTL
                     VRFGDCAHTAAEIVAGIRDEKEKIRRVTSIFKAMARFFWFTIEFGLMRGNGDLKVYGS
                     GLLSSYGEIAHSIESSEVQRYPIQLEWVINQYFEIDHYQPLLFIVDSFDHLFDLVGEL
                     ERWMRHGRLDNVSPGEPAISEPDLKSFLDASAAK"
     gene            complement(1112..>2316)
                     /locus_tag="VFD73_27720"
     CDS             complement(1112..>2316)
                     /locus_tag="VFD73_27720"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI77760.1"
                     /translation="ASGEKVLREAIQQNGQDKNPAAWYYLGRIYLQRGDLVGADSALS
                     KAEALDPACKEDFTQARYVAWVPLLNAGIQFSQAKNNDSALALFRQANTIYRDKSTSY
                     LNAGVIFASAGQTDSAIAYWKKAAEIAEQTNAVEDRNAATRNLGAVYQRVGRHQEAIP
                     VLEKYLTWVPNDTEVKRALAGSYRATGQNDKAAAIEKEVGAAPGGAAGAPAAGGSASA
                     MNAAIELYNQKKYAEAAAAFEKIVATEPYNRDALYGLANSYIGLKSPKLADVAARLVQ
                     IEPMNEEIVRMYANGLRMAKKETQANKAAVQVLSMPVSVTVSQFAPTPTDASITGTAT
                     GREAQTAQGKPVAATPMTLIFEFLDAKGAVVANQEVQVPALKPGQTQPITAKGQGAGI
                     VAWRYKKK"
BASE COUNT          421 a          715 c          695 g          485 t
ORIGIN      
        1 gcgggcggca cacacgggca gaagacggta ttcagagcgg gcgaccggac tcgaaccggc
       61 gacgtccagc ttgggaagct ggcattctac cactgaatta cgcccgcgtg ttgcagcgga
      121 aagtatagcc gaagaatcgg aaggaaaaga ggcggaagcc agctgtctac ttggctgccg
      181 acgcgtccag aaaactcttc agatccggct cactgatcgc cggctcgccc ggcgacacgt
      241 tgtccagccg tccgtggcgc atccaccgct cgagctcacc caccagatcg aagagatggt
      301 cgaaggagtc gacgatgaac agaagcggtt gatagtgatc gatctcgaag tactggttga
      361 tgacccactc cagctggatg ggatagcgct gaacctcgga agactcaatg gagtgcgcaa
      421 tctcaccgta ggagctgagc aagccgctgc cgtaaacctt gagatcgccg tttccccgca
      481 tcaatccgaa ctcgatggta aaccagaaaa atctggccat cgccttgaag atgctggtga
      541 cccgccgaat tttttctttc tcgtctctaa tccccgcgac gatctccgca gccgtatggg
      601 cgcagtcccc gaagcgtacc agcgtatcgg caaacgcccg gtccgtgtgc atcgggacat
      661 ggcccgcaat gtcgtggaag atgtccggct caggcagata atccagcgtc gccccgtcgc
      721 ggatcgtgat ggtggtcgga aattcccgac tgcgaagact gttaaagaag agaaatgagg
      781 ggatgtaccc gctcacggct ttagccttga agccggtgag cgggctcaga aaacggttca
      841 cgtcctccag ccgcggcacc cgggtgggct ccaggcagag actgtcgatg ccttggagga
      901 aacggtgatt ggcataccgg cgccagcggt cttccatccg ggcgaacagc tttcgccagg
      961 cctcatgatt ggcctcggag tacaactcgt atggctgatg gatgtacagg cggccctcga
     1021 gttgggcctg ctcgatgaac ggagccttgg tcgtcgtgag tccgctgccc gccaccggtt
     1081 caccttgtac tgtcgccata cgctctctcc gttacttctt cttgtaccgc caggccacga
     1141 tccctgcgcc ctggcccttg gctgtgatcg gctgtgtctg gccgggcttg agcgccggca
     1201 cctggacctc ctggttggcc accacggcgc ccttggcgtc gaggaactcg aagatcaggg
     1261 tcatcggcgt tgccgccacg ggcttgccct gcgccgtttg tgcctcacgg ccggttgcgg
     1321 tgccggtgat gctggcgtcc gtgggagtcg gtgcaaactg actcaccgta acggagaccg
     1381 gcatggatag gacctgcacc gcggctttgt tggcctgggt ttccttcttg gccatacgga
     1441 gtccgttggc gtacatccgc acgatctctt cgttcatcgg ctcgatctgc accaagcgtg
     1501 cagcaacgtc cgccagcttc gggctcttga ggccgatata ggagttggcc aatccgtaca
     1561 gcgcgtcccg attgtagggc tcggtagcaa cgatcttctc gaacgcggcc gcggcttcgg
     1621 cgtatttctt ttggttatag agctcgatcg cggcgttcat tgcactggct gaacctccgg
     1681 ccgccggagc acccgccgcc ccacccggcg cggccccaac ctccttctca atcgctgccg
     1741 ccttgtcgtt ctgcccggtg gcccgatacg accccgccag cgctcgcttc acctcagtgt
     1801 cgttgggcac ccaggtcagg tacttctcca acaccggaat agcctcctga tgccgaccga
     1861 ctcgctgata gaccgccccc agatttcgag tggcggcgtt gcggtcttcg actgcgttag
     1921 tctgctccgc gatttcagcc gcctttttcc agtaggcgat cgcgctgtcg gtctggcctg
     1981 cgctggcgaa aatgacaccg gcgttgagat acgacgtgga tttgtcgcgg tagattgtgt
     2041 tcgcctgccg gaagagagcc agcgcagagt cgttattctt tgcctgggag aactggatac
     2101 ctgcatttag cagggggacc catgcgacgt agcgggcctg ggtgaaatcc tctttgcatg
     2161 cgggatccaa tgcctcggcc ttggatagcg cgctgtcggc gccgacgaga tctccccgct
     2221 gcagatagat ccgtcccaga tagtaccagg cggccggatt cttgtcctga ccgttctgct
     2281 gaatcgcctc gcgcagcacc ttctcacctg aagcga
//
LOCUS       DASRPQ010002471         1042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3120449, whole genome shotgun sequence.
ACCESSION   DASRPQ010002471 DASRPQ010000000
VERSION     DASRPQ010002471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1042
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3120449"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..217)
                     /locus_tag="VFD73_27725"
     CDS             complement(<1..217)
                     /locus_tag="VFD73_27725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010512305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77761.1"
                     /translation="MLIGYARVSKSDGSQTLAPQRDTLIGAGDLEPRLTRHGYSVRTL
                     AEQFNAKPVEIKRLLHGELDAARARELT"
     gene            complement(409..>1042)
                     /locus_tag="VFD73_27730"
     CDS             complement(409..>1042)
                     /locus_tag="VFD73_27730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77762.1"
                     /translation="ILTRYRRLREVSKQHHAAVLDVIAPHVVMDYAKQLGLTRGKVVV
                     LDRTEDMTLAVDLAIYLAKPGRSHSLDRYAEAAQFLPGSDEATVLEAMCHARFSIWRV
                     ERLHETAGLVLRDLLRQEETWLVDESMEKNPPLGGALAGRLFTPESFAMTTGVLVPVT
                     RSLMKEVSDKIPALQHATATAIARDLRFATAIYRVGLARGATGSVRYEYT"
BASE COUNT          181 a          307 c          362 g          192 t
ORIGIN      
        1 cggtgagttc gcgggcgcgg gctgcgtcca gttcaccgtg cagcagacgc ttgatctcaa
       61 ccggcttggc gttgaactgc tcggcgaggg tgcggacact gtagccgtgt cgggtcagcc
      121 tgggctcgag gtcaccggcg ccaatcagcg tgtcacgctg cggcgccagc gtctggctgc
      181 cgtcgctctt cgagacgcgt gcgtagccga tgagcatggg tgtgaaaccg ccagaaaaga
      241 tggctggcag ggtgcaacct tgcgttgatg atggcaacgg gtttcttggc ggtttggaag
      301 ctggatttag ccgggtcggc aggaacaaag aaaccggtcg ttttccggaa aaaccagtct
      361 tacataacgt gggccaagcc tgatgatcgc aggccgctac cgctacatct atgtgtattc
      421 gtaacggacc gatcccgtcg cgccccgggc aagaccgacc cgatagatgg cggtggcgaa
      481 gcgcagatcc cgggcgatgg cggtcgctgt ggcgtgttgc agggcaggga tcttatcgga
      541 gacctccttc atcaagctcc gggtgaccgg cacgaggacg ccggtggtca tggcgaagct
      601 ctccggggtg aacaggcgtc cggcgagggc tccgcccagc ggcggatttt tctccatgga
      661 ttcgtccacc agccaggttt cctcctgacg cagcaagtcc cgcaggacta gccccgcggt
      721 ctcatgcagg cgctcgaccc gccagatgga gaaacgggcg tggcacatgg cctcgagcac
      781 ggtcgcctcg tccgatcccg ggaggaactg tgccgcctcg gcatagcggt cgagcgagtg
      841 tgagcggccc ggcttggcca ggtagatggc aaggtcgacg gccagcgtca tgtcctcggt
      901 acggtcgagc accacgacct tgccccgcgt caggccgagc tgtttcgcgt agtccatcac
      961 cacgtggggg gcgataacgt ccaggacagc ggcgtggtgt tgcttgctga cctcacgcag
     1021 gcggcggtag cgggttagga tc
//
LOCUS       DASRPQ010002472         1035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4371109, whole genome shotgun sequence.
ACCESSION   DASRPQ010002472 DASRPQ010000000
VERSION     DASRPQ010002472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4371109"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..906
                     /gene="clpX"
                     /locus_tag="VFD73_27735"
     CDS             <1..906
                     /gene="clpX"
                     /locus_tag="VFD73_27735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HZI77763.1"
                     /translation="TGVGKTLLAQTLARILDVPFTIADATTLTEAGYVGEDVENILVR
                     LLQAGEFNVAECERGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIASV
                     PPQGGRKHPQQEYIQINTKDILFICGGAFDGLEKIIEARTGRQQIGFSSEDRKSAPQL
                     TKGNPYAEVEPDDLLRFGLIPELVGRLPVVVSLEALDEEALIRILVEPKNALTKQYKK
                     LFELEDVGLTFDPESLRAVAQRALKRGTGARGLRAILETMMTDIMFDLPNREDVREIV
                     ITKEAISEGTSPLIVTERARTKREA"
BASE COUNT          221 a          311 c          339 g          164 t
ORIGIN      
        1 accggcgtgg gtaaaaccct gctggcccag accctcgcac gaattcttga cgttcccttc
       61 accatcgctg atgccaccac cctgacggaa gccggatacg tcggcgagga tgtcgagaac
      121 attctggtcc gcctgcttca ggccggcgag ttcaacgtgg ccgagtgcga gcgcgggatc
      181 gtgtatatcg atgagatcga caagatcgcc cggaaatcgg agaaccccag catcacccgc
      241 gacgtgtccg gcgaaggcgt gcagcaggca ctcctcaaga ttctcgaggg aacgattgcc
      301 tcggttcccc cccaaggcgg ccggaagcat cctcagcagg aatacatcca gatcaacacc
      361 aaggacattc ttttcatctg cggcggtgca ttcgacggcc tggagaagat catcgaggcg
      421 cgcaccggcc ggcagcaaat cggattctcc agcgaagatc gcaagtcggc gccccaactc
      481 accaagggaa atccctacgc ggaggtcgag ccggacgatc tgctccgatt cggcttgatt
      541 ccggagttgg tgggacggct gcccgttgtg gtctctctcg aggcgctgga tgaggaagcg
      601 ctgatccgga tcctggtgga gccgaagaac gcgctcacca aacagtacaa gaagctgttc
      661 gagctggagg atgtgggcct caccttcgat cccgaatcgc tgcgagccgt ggcgcaacgg
      721 gcgctgaagc gcggcaccgg cgcccgtggg ttgcgcgcca tcctggaaac catgatgacc
      781 gacatcatgt tcgacttacc gaaccgggaa gatgtccgcg agatcgtgat caccaaggaa
      841 gcgatcagcg agggtacctc gccgctgatt gttacggagc gggcgcggac caagcgggag
      901 gcgtgagacc agcggggcag cgggacagcg gggcagcgag gcggcggggc aaaacggcgg
      961 gagccagcca aagttctacg ggcgcacggg gtgcgcccgt cgtgcatcag gctctcggga
     1021 cagaaaaccc gctgg
//
LOCUS       DASRPQ010002473         1100 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4700713, whole genome shotgun sequence.
ACCESSION   DASRPQ010002473 DASRPQ010000000
VERSION     DASRPQ010002473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4700713"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(226..426)
                     /locus_tag="VFD73_27740"
     CDS             complement(226..426)
                     /locus_tag="VFD73_27740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77764.1"
                     /translation="MLYRVATVTVFGTPENPRANLTVRLVSDIVVLSRRPIHQERVPI
                     ALPTARSPREWLLEALDSIPRQ"
     gene            445..1011
                     /locus_tag="VFD73_27745"
     CDS             445..1011
                     /locus_tag="VFD73_27745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77765.1"
                     /translation="MPNLSRMVWSWAGSPVVGPGATVVHCQAGDEATLATAMNTFFAA
                     VTNLMPTGLQISPPVSGDVIDEASGDVVSHWTIGPSGPLNFSGAGTWVNGVGARLKFP
                     TIGIANGRSVVGAIFLVPLVSSAYEGAGNLVGSFVSTATTAANNLATTPNGLRIYSRK
                     TTSHAGTSFPALSGVCPDRVSWLRSRRT"
BASE COUNT          158 a          343 c          372 g          227 t
ORIGIN      
        1 gagtggggtc tgtccggatc gggtttcctg gctccggtcg cggaggacct gagtcaacct
       61 gtctatcgct gctggggccg accggagctc gcttcgctcg cgctggcctt tccggcggcc
      121 gccgcgtttt tacgctagga ctgtcagtgg ctcgtgccaa gatgcaagga cccccggaag
      181 tgcgacccgg ctttggcaga tgttgccgaa gccgggtcgc atggctcatt gcctggggat
      241 gctgtctagg gcttctagga gccattctct ggggctccgt gctgtgggta gtgctatggg
      301 caccctctcc tgatgaatgg gccgcctgga cagcacgacg atgtctgaca caagcctcac
      361 ggtgaggttg gcccgggggt tctcaggggt gccgaagact gtgacagtgg cgactctgta
      421 gagcatgagc tgtacctttc aactatgccg aatctctctc gaatggtgtg gtcctgggcg
      481 gggtcgcccg tggtggggcc aggtgcgacg gtcgtgcact gccaggccgg cgatgaagcg
      541 acactcgcta ccgcaatgaa cacgtttttc gccgcggtga ccaacctcat gccgacgggg
      601 ctgcagatct ctcctcccgt ctctggagac gtcatcgacg aggccagcgg agacgtggtg
      661 tcgcactgga ccatcggtcc ttccggccct ctcaacttca gcggggccgg cacctgggtg
      721 aacggtgttg gcgctcgcct gaagttcccg actatcggca tcgccaacgg gcgttccgtg
      781 gtgggggcga tcttcctcgt gccgctggtc tcgagcgcct acgaaggtgc cggcaacctg
      841 gtcggctcgt tcgtgagcac ggccacgacg gcggcgaaca acctggccac gacacccaac
      901 ggcctccgga tttacagccg gaagaccacc tcgcacgcgg ggacgtcgtt cccggccctg
      961 agtggggtct gtccggatcg ggtttcctgg ctccggtcgc ggaggacctg agtcaacctg
     1021 tctatcgctg ctggggccga ccggagctcg cttcgctcgc gctggccttt ccggcggccg
     1081 ccgcgttttt acgctaggac
//
LOCUS       DASRPQ010002474         4331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3122817, whole genome shotgun sequence.
ACCESSION   DASRPQ010002474 DASRPQ010000000
VERSION     DASRPQ010002474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4331
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3122817"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1307)
                     /locus_tag="VFD73_27750"
     CDS             complement(<1..1307)
                     /locus_tag="VFD73_27750"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HZI77766.1"
                     /translation="MTEIDDLPDRGYDAALLRRLLVYLRPYWGLTIFAVFLLLAGAGL
                     ALVGPALTQRALDQAVPRHDVHLLGIFAALLLLALLLDFVVEYGQTLLTAYLGQRVMY
                     DLRMEIFSHLQRLSIPYFDRNPVGRLMTRVTSDVETLNELFSSGVVTVFGDVFTLLAI
                     MTMMLLVDWRLALVTFAVIPLVWLTASIFRRRVREAFRDIRYRLTRLNAYLQERLSGM
                     RVVQLFGREEDSAAKFAELNQEHLAAHLRSITIYAVFFPMVEFLTAVAMALLLYYGGL
                     RTLHGTLTVGVLAAFIQLTRRFFQPLQDLSEKFNLLQSAMASSERVFALLDEPVTVLE
                     PSSPTTLPRPARGEVRFENVWFRYSPEGPWVLRDVSFTASPGQTIALVGHTGAGKTTI
                     VNLLLRFYDPERGRILIDGVDIRRLTTSELRSLIGFVQQDLFL"
     gene            complement(1300..2412)
                     /locus_tag="VFD73_27755"
     CDS             complement(1300..2412)
                     /locus_tag="VFD73_27755"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HZI77767.1"
                     /translation="MPRLLTPKLLLRGFEVFLVASLTGFGVTLLYGNDLPAFLAAVGR
                     LHWIWILVGVGLASMDWLGGGLRLWVVARHVYPRPSLKGMILAGGMGAWAAYITPLNS
                     GAGPMTMYTMRRYGVPLPVAVTSTFMSFVATVLFFAIAGPLAVVFGAGRSLGQHGNVL
                     GLSLFDLFLGSLAIVAGIGLLMAVVLLFPRLVRDLIHRAAKAIGRRSQRVAERLDQLQ
                     AGIDQAHESIVAFKSPSGVLALFWATILSGPSHANKLLAGYVALRALGIHTNFVDILL
                     VQTLVMFLLYFAPTPGASGVGEVLSAAVMSSYVPRELTPIYILIWRLTLSYYTIGFGF
                     LVFSSWVRRGLKGVGPALEDAPIGATESAITPALHD"
     gene            2469..>4331
                     /locus_tag="VFD73_27760"
     CDS             2469..>4331
                     /locus_tag="VFD73_27760"
                     /inference="COORDINATES: protein motif:HMM:NF036484.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HZI77768.1"
                     /translation="MDSVIRIVNAHQNNLKGISVDLPHRQLIVVTGPSGSGKSTLAFD
                     TLYAEGQRRYIESLSTYAKQFLDRMPKPQVDRLEGLAPAVAIEQRNPVISSRSTVGTA
                     TEVYDYLRLLWARIWRCYCRKCGAPVHRDTPEDSADRVVAQGGRVQVCFPLPPVARLA
                     HPAVVENLRALGFVRVIADGTPHHLEDLPSGLDLTRVRELLIVVDRLVADAASFSRVC
                     EALATAFAEGEGVAVVLLESETGERARLRFTEYPACSECDTPAVTVTPALFSFNNPRG
                     ACSHCNGFGAVLEYDESLIVCDPGKSLSRGAIDPWTKPRYESRRRILLQFARSIGADP
                     DTPWSRLRASHRREILYGRKGRFVGIFSFLKGLEEKRYKQYIRVFLRQYQLAKTCDAC
                     GGSRLNPDALSIRIGPNTIGEVASRSLDQLHHWLHGLTLTGTEQEVAQLIIDQLDARL
                     GFLRDVGLGYLTLDRQTRTLSVGEAQRISLSNALGSRLVDTLYVLDEPTVGLHSRDTE
                     RLLGLLRRLRDGGNTVIVVEHDLAAIREADFMLELGPGSGEHGGSVVHAGAVREARAS
                     LTGQYLTGQKRIAVPSIRRPAGPQWLRVRGATLHNLLGVDVDIPLGTLTAVTGVS"
BASE COUNT          829 a         1396 c         1375 g          731 t
ORIGIN      
        1 aacaggaaga ggtcctgctg gacgaagccg atcagcgatc tgagctcgga ggttgtgagc
       61 cggcgaatgt cgaccccgtc gatcaagatc cgtccccttt ccgggtcgta gaaccggaga
      121 agcagattga cgatcgtcgt ctttcctgcg ccggtgtgac cgaccagggc aatcgtttga
      181 cccggagagg cggtgaacga gacgtcccgc agaacccacg gcccctcggg actgtagcgg
      241 aaccacacgt tctcgaatcg gacctcgccc cgcgcgggtc gcggcagggt cgtggggctg
      301 gagggctcca gcaccgtcac cggctcgtcc agaagcgcaa agacccgctc cgaggaagcc
      361 atggcgcttt gcagcaggtt gaacttttcc gagaggtcct gcagtggctg gaagaaccgt
      421 cgggtcaact ggatgaaagc cgccagcacg ccgacggtca gcgttccgtg cagcgttcgg
      481 agaccaccgt aatagagcag cagcgccatt gccaccgcgg tgaggaactc caccatcggg
      541 aagaacacgg catagatcgt gatcgaccga aggtgcgctg ccaggtgctc ctggttgagc
      601 tccgcgaact tcgccgctga gtcctcttct ctcccgaaca gttgcacgac ccgcatgccc
      661 gagagccgct cctgaaggta ggcattcaac cgggtgaggc ggtatcgaat gtccctgaat
      721 gcctcgcgca cccgccggcg aaagatgctg gcggtgagcc agaccagagg tatgaccgcg
      781 aaggtgacca gtgccagcct ccagtccacc agcagcatca tcgtcatgat cgcgagcagg
      841 gtgaacacat caccgaagac agtgactacc ccggaggaaa acagctcgtt cagcgtctcg
      901 acgtctgagg tcacccgggt catcagccgc ccgaccgggt tccggtcgaa atacggaatg
      961 ctcagtcgct gcagatggct gaagatctcc atccggagat cgtacatcac ccgctgcccc
     1021 aggtacgcgg tcagcagcgt ttggccgtat tccaccacga agtccagcag caatgccagg
     1081 agaagtagcg cggcaaagat gccgagcagg tggacatcgt ggcggggaac ggcctggtcg
     1141 agcgcgcgct gggtgagtgc gggtcccacc agcgccaagc cggctcccgc cagcaacagg
     1201 aagacggcga agatggtgag gccccaatag ggacggaggt agaccaggag ccgacgcagc
     1261 agtgcggcgt cgtacccccg atcggggagg tcgtcgattt cagtcatgca atgccggtgt
     1321 tattgccgat tcagttgcgc cgatcggtgc gtcttccagt gccggaccca cgcccttgag
     1381 gccgcgccgg acccagctgg agaaaaccag gaatccgaat ccgatcgtat agtagctcag
     1441 cgtcagtcgc cagatcagaa tgtagatcgg ggtcagctcg cgggggacgt acgaggacat
     1501 caccgccgcg gagagcacct cacctacgcc cgaggcaccc ggcgttggag caaagtagag
     1561 aaggaacatc accagcgttt gtaccagcag aatgtcgacg aaattggtgt ggatgcccaa
     1621 cgcccgaagg gcgacgtatc cggccagcag tttgttggca tgcgaagggc cggacagaat
     1681 cgttgcccag aagagggcga gcactccgct cgggctcttg aaggcaacga tgctctcgtg
     1741 ggcctgatcg atcccagcct ggagctggtc cagccgctcg gccacccgtt ggcttctgcg
     1801 gcctatcgct ttcgccgcgc ggtggatcag atcgcgcacc aaccggggaa acagcaggac
     1861 gacggccatc aagaggccga tgccggcgac gatggccagg ctgcccagga acagatcgaa
     1921 cagggacagc ccgagcacgt tcccgtgctg acccagtgag cggccggcgc cgaacaccac
     1981 cgccagcgga ccggcaatcg cgaagaagag cacggtggcc acgaagctca tgaaggtcga
     2041 ggtgactgcc actggtagcg ggacgccgta gcgccgcatg gtgtacatcg tcatcggtcc
     2101 cgcgccggaa ttgagcggtg tgatgtacgc ggcccacgcg cccattccgc cggccaggat
     2161 catccctttg agcgacggtc gtgggtacac gtgccgcgcc acgacccaga gccgcaggcc
     2221 accgccgagc cagtccatcg atgcgagacc aaccccgacc aggatccaga tccagtgcag
     2281 ccggcccacg gcggcgagga aagccggaag gtcgtttccg taaagaagag tgaccccgaa
     2341 gccggtaagc gaggcgacga ggaacacctc gaatccgcgc agcaacagct tgggggttaa
     2401 gaggcggggc atggatgggg aagaatagcg gaagcagcgg aaccagcgga aggagctatt
     2461 ttccgcctat ggattccgtc atccgcatcg tcaatgccca tcagaacaat ctgaagggga
     2521 tcagcgtcga tctgccgcac cgccagttga ttgtggtgac cggcccctcc gggtcgggca
     2581 agagcactct cgctttcgat acgttgtacg ccgaaggtca gcgtcgctac atcgagtcgc
     2641 tgtccaccta cgccaagcaa tttctcgatc gcatgcccaa gccccaggtt gatcggctgg
     2701 aggggctggc gcctgccgtc gccatcgagc aacgcaaccc cgtgatctcc agccgctcta
     2761 ccgtgggaac ggcaaccgag gtgtacgatt atctgcgctt gctgtgggcc cgcatctggc
     2821 gctgttactg ccgcaagtgt ggcgcgccgg tgcaccggga cactcccgaa gattccgccg
     2881 atcgggtcgt ggctcagggt gggcgggtgc aggtctgctt tccgctgcct ccagttgcgc
     2941 gattggccca tcctgccgtg gtcgagaacc tccgcgcgct cggcttcgtc cgcgtcattg
     3001 ccgatggaac accccaccat ctcgaggacc tgccctccgg gctcgatctc acccgcgtcc
     3061 gcgagctgct catcgtggtc gatcgcctgg tggccgatgc cgcctccttc agtcgggtgt
     3121 gcgaggcgtt ggcgaccgcg ttcgccgaag gcgagggagt tgccgtggtc ctgctcgagt
     3181 cggagaccgg agagcgggcc cggctccgtt tcaccgaata ccctgcctgc agcgagtgcg
     3241 atacccccgc cgttaccgtg acgcctgcgc tcttctcctt caacaacccc cgcggcgcct
     3301 gctcccactg caatggcttc ggtgcggtcc tggagtatga cgagtcgctg atcgtgtgcg
     3361 accccggcaa gagcctttcc cggggggcca tcgatccctg gaccaaaccc cgctatgaat
     3421 cgcggcggcg gattcttctt cagttcgccc gctcgatcgg tgctgacccc gacacgccct
     3481 ggtccaggct cagggcctcg catcgccgtg agattctcta cggccgaaag ggccgcttcg
     3541 tcggcatttt ttcctttctc aaggggttgg aggagaagcg ctacaagcag tacatccggg
     3601 tttttctccg gcagtaccag ctggccaaga cctgcgacgc ttgcggcggc agcaggctca
     3661 accccgacgc gctctcgatc cgcatcggac ccaataccat cggcgaagtc gcatcacggt
     3721 cgctggacca gctccaccac tggctgcacg ggctgaccct gaccggcacc gagcaagaag
     3781 tggcgcaact gatcatcgat cagctcgatg cccggctcgg ctttttgcgc gacgtgggcc
     3841 tgggctatct caccctcgac cggcagaccc gcacactgag cgtaggcgag gcgcagcgga
     3901 tttccctctc caacgcgctc ggctcacgat tggtggacac cctgtacgtt ctcgacgagc
     3961 ctaccgtcgg tttgcattcg cgtgacaccg agcgcctgct ggggctcctc cgccgtctcc
     4021 gcgacggcgg caacaccgtg atcgtggtgg agcatgatct agccgccatc cgggaagccg
     4081 actttatgct cgagctggga cctggctcgg gagaacacgg gggctccgtc gttcatgcag
     4141 gcgccgtccg agaggccaga gcgtctctga ccggacagta tctcaccgga cagaaacgga
     4201 tcgcggtgcc cagcattcgc cggcctgccg gtcctcagtg gctccgggtt cgcggcgcca
     4261 ctctgcacaa tcttctcggc gtggacgtgg acatcccgct ggggacgttg accgcggtga
     4321 ccggcgtctc c
//
LOCUS       DASRPQ010002475         1016 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4068281, whole genome shotgun sequence.
ACCESSION   DASRPQ010002475 DASRPQ010000000
VERSION     DASRPQ010002475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4068281"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..745)
                     /locus_tag="VFD73_27765"
     CDS             complement(<1..745)
                     /locus_tag="VFD73_27765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
                     /protein_id="HZI77769.1"
                     /translation="MPSTLRVQLQLRIVSDDDTVIRDEVILQLDKSSDRLETVGLCLE
                     DSKDLLGRLQRAVVEAQAAAYVDRHRRCSACGRRLRGKGQYPIVFRTAFGHVPLASPR
                     FYRCRCYPADTGTFSPLAELFTEHTAPELLYLESRWASLISFGLTTALLKDVLPVAGT
                     TNPETVRQHLHKVATRQDADLGTSELGVRDDDPAAGQASPIAREAVIVGIDGGYLRNW
                     HDKRKKFEVIVGKSMAEDRNDRYFGLVRSQ"
BASE COUNT          186 a          310 c          319 g          201 t
ORIGIN      
        1 cctgactgcg gaccaggccg aaataacgat cgttgcgatc ctcggccatc gacttgccga
       61 cgatgacctc gaatttcttc cgcttgtcgt gccagttccg gaggtagcca ccgtcgatcc
      121 cgacaataac tgcttcccgc gcgatcggtg acgcctggcc agcggcagga tcgtcatccc
      181 tcacgcccag ctcgctggtg ccgagatcgg cgtcctgccg ggtggcaacc ttgtggagat
      241 gctggcggac ggtttcaggg ttggtcgtgc cggcgaccgg caggacgtcc ttgagcaagg
      301 cggtcgtcag gccgaaggag atcagggagg cccagcggct ctccaggtag agcagctctg
      361 gcgcggtgtg ctcggtgaac agctcggcca gcgggctgaa ggttccggtg tccgccgggt
      421 agcaccggca gcggtagaag cgcgggcttg cgagcggaac atggccgaac gcggtgcgga
      481 agacgatcgg gtactgcccc ttgccacgca aacggcggcc gcaggcagag cagcggcgat
      541 gccggtcgac gtaggccgcc gcctgggctt cgaccacggc acgctggagc cggccgagca
      601 gatccttgga gtcctccagg cacaggccaa ccgtctcgag ccggtcactg ctcttgtcga
      661 gctgcaggat cacctcatcc cggatcacgg tgtcatcatc gctgacgatg cgaagctgaa
      721 gctgaacgcg cagggtcgac ggcatgctgg attgtccacg aactcagtct ggtagagagg
      781 cccatcagcc tacctgcctc tgccgaccca gactacccaa tgccccacgg ttcctgatgc
      841 tctcacgtca ggatgggccg tcctttggcg gcatgacgct tatgccagcg gactactcgg
      901 ttgatccgct tattttatac caaattgtta taaaataatt tattggctgt caaaggactg
      961 gacgacatca tgttctccat gcttcgcgtt tttggaaacc cgctgtttgt agcttg
//
LOCUS       DASRPQ010002476         1016 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2492990, whole genome shotgun sequence.
ACCESSION   DASRPQ010002476 DASRPQ010000000
VERSION     DASRPQ010002476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2492990"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..607)
                     /locus_tag="VFD73_27770"
     CDS             complement(<1..607)
                     /locus_tag="VFD73_27770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77770.1"
                     /translation="MTTASGSELPVARARRRPSRAAPLTALAILVVAGFLTWYLVSRP
                     QLVFTNALAAPIWLTAGQNPPATLDPRKTRRLNIPRGNALVVEWNLARPLSANQRPMG
                     EELRGSAVVRASGGKVVQSASARSADANYFAPLITNATGNLLRITVNAGLEGAVDCGC
                     AIRPGARRVFIGYYHLYQNSTVTARDDKGRRATFRDLGRQVV"
BASE COUNT          192 a          323 c          319 g          182 t
ORIGIN      
        1 agaccacctg ccgacccagg tcccggaagg tggcgcgccg acctttgtca tcgcgggcgg
       61 tgacggtgct gttctggtac aagtggtagt agccgatgaa gacccgtcga gcgcccggcc
      121 ggatggcaca cccgcaatcg acggctccct ccagaccggc gttgaccgta atccggagaa
      181 gattgccggt cgcgttggtg atcaacggag cgaagtaatt cgcatcggct gaccgggcgg
      241 aggcactctg caccaccttg ccgcccgacg cgcggacgac tgccgatccc cgaagctcct
      301 cccccatcgg tcgttggttg gctgacaacg gccgcgccag gttccactcc accaccagcg
      361 cgttcccccg cggaatattc agccggcgag tcttcctcgg atccagggtg gccggcgggt
      421 tctggccggc tgtcaaccag attggtgcag ccagcgcgtt cgtgaacacg agctgcggcc
      481 gggaaaccag gtaccaggtc agaaatccgg cgacgacgag gatagcgagg gcagtcaggg
      541 gtgccgccct ggagggacgg cggcgggcgc gggcgaccgg cagctctgag cccgaggcag
      601 tggtcacatg gactcagggc gggagcgtcg gcgcgtcacg gctgtaagga taacgcggtc
      661 tatcggcggg agatatgggc tctgcggcgt tcgcttctgt gcgcagtttc ttgcactatt
      721 tgcggaaatc gatcgttaaa ggttgaggga ttccaagact cctgcagatc tgtaacaatt
      781 tttctgcata gaatgcacaa atctcttgac accgcgtaaa cccacctgta tactctcgcc
      841 agtagccaag ttcgttccag cggaagtgag atcctcatgc ggcaactcaa ccgacccggc
      901 cccaatcccc agccccagtg gccggcaagc cagcgaaacc ggccgctgat tctgatcgaa
      961 ccgcctggac cttggcactg agttgtcccc gtgctcaccc gatgcccctg cgttcg
//
LOCUS       DASRPQ010002477         2279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_616900, whole genome shotgun sequence.
ACCESSION   DASRPQ010002477 DASRPQ010000000
VERSION     DASRPQ010002477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_616900"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            263..1048
                     /locus_tag="VFD73_27775"
     CDS             263..1048
                     /locus_tag="VFD73_27775"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HZI77771.1"
                     /translation="MAELISQPDGPVHRLTLNRPNRRNALTPALARSLAQEIEQVEEA
                     GQARVILLSGAGGHFCAGLDLRWLDSLGETPPVSDLQHGLSDFQSAVIAVVRCPIPVL
                     AVVQGTVAGFGFDLALACDMRLAGTSATFTSAFARMGLVPDGGSTFSLPRLVGVGRAL
                     RVLMTDHSIDAGSALSIGLVEEVIDDLELEAGVARVVGAIVAAADSSVRAIKRLSRAQ
                     EVGALEQALSSEGAAQLQALQSAEFRSRLEAFTSRITAKRPGT"
     gene            1045..1848
                     /locus_tag="VFD73_27780"
     CDS             1045..1848
                     /locus_tag="VFD73_27780"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZI77772.1"
                     /translation="MSRPAGIFRDDLLAGRVALVTGGGTGIGLGIARCLAAVGAEVAI
                     ASRNPEHLEPAAQELRGLGGKVTAQQVNVREPEAVGRMMEQVSRDHGRLDILINNAAG
                     NFYAPSAGLSPNGWRAVMETDLYGTFFCSQAAYPIMKAQGGGRIVSISMTLHYRGWPQ
                     MAHATAAKAGIDALTRTLALEWASDRITVNAVAPGPIPTEGVKKAFTPPGADGPDLFG
                     MENFAVKTIPLGRWGTPQDIGHMVTYLASPAADWITGGIFVVDGGAWLK"
     gene            1859..>2279
                     /locus_tag="VFD73_27785"
     CDS             1859..>2279
                     /locus_tag="VFD73_27785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77773.1"
                     /translation="MFLGHYGVAFALKRVEPKVSLGTFFLAVQLADLLWGVFLLLGWE
                     HARIVPGYTPVTPFEFLDYPISHSLVAALVWGLVAAAFYYSWPTRDTTRHWQAAALVG
                     AAVFSHYPLDVLVHVPDLPIAGNDSPKIGLGIWNYPVA"
BASE COUNT          391 a          695 c          765 g          428 t
ORIGIN      
        1 ctcccaacca cggaggcgga gataccgcct cagagagctg cggatcgtcg actcatcatc
       61 gaccaccagc acacgccgca gcggagcgac gggcaccacc acgtgccctg gatggcttga
      121 agtcactcag gccgggaagc cgaggctgat gactggctgg gggagccgag gtgtgaacac
      181 gagcttcttc gtataatagt actctgaatt cgctcgccgg gtagcagctc ggcacaagca
      241 tccccgtccc ccaaagagag ccatggccga gctgatttcc caaccggatg gtcccgtcca
      301 ccggctcacc ttgaatcgtc ccaatcgccg caacgcactc acgcccgctc tggcccggag
      361 cctggcccag gaaatcgagc aggtcgagga ggcgggccag gcgagagtga ttctgctctc
      421 cggcgcgggc ggacatttct gcgcgggcct ggatctacgc tggctggatt ccctgggaga
      481 gactcctcca gtctccgacc tccagcacgg cctcagcgat tttcagtcag ctgtgatcgc
      541 cgtggttcgc tgtcccattc cggtattggc ggtggtgcaa gggacagtcg ccgggttcgg
      601 ctttgacctc gcactggcgt gtgacatgcg gctggcaggc accagtgcca cgttcacgtc
      661 ggcctttgcc cggatgggac tggtcccgga tggagggtcg acattttctc tccccagact
      721 ggtcggcgtc ggacgagcac tccgagtgct catgaccgat cattcgatcg acgcggggtc
      781 tgctctctcg atcgggctgg tggaggaagt catagacgac ctcgagctgg aggccggtgt
      841 ggcgcgtgtc gtcggcgcca tcgtcgcggc cgccgattcc agtgttcggg cgatcaagcg
      901 tctgtctcgg gcgcaggagg tcggggcatt ggagcaggcc ctctccagcg aaggcgccgc
      961 tcagttgcag gcgctgcaga gcgccgaatt tcgttcgcgg ctcgaggcgt tcaccagccg
     1021 aatcacggcc aagagaccgg gcacgtgagc cgcccggccg gcatattccg agacgatctt
     1081 ctggccggcc gcgtcgcgct ggtcaccggg ggcggcaccg ggatcgggtt ggggattgcc
     1141 cgctgcctcg ctgcagtcgg agccgaagtc gccatcgcga gcagaaatcc ggagcatctc
     1201 gagcctgcgg cgcaggagct ccgtgggctc ggcggaaaag tcaccgcaca gcaggtgaac
     1261 gtgcgggagc cggaagcggt ggggcggatg atggagcagg tctcgcggga ccacggccgg
     1321 ttggatatcc tgatcaacaa cgcagcggga aacttctatg cgccgagtgc cggcctctca
     1381 cccaatggct ggcgggccgt gatggagacg gatctgtacg gcaccttctt ctgcagccag
     1441 gcggcttatc ccatcatgaa ggcgcagggt ggcgggcgaa tcgtctccat ctccatgaca
     1501 ctgcattacc gggggtggcc ccagatggcc cacgccacgg cggcaaaggc cgggatcgac
     1561 gcactgactc ggactctggc actcgagtgg gcgagcgatc ggatcacggt aaacgccgtt
     1621 gcgcccgggc caatacctac cgaaggagtg aagaaggcat tcacccctcc gggagccgat
     1681 ggtcccgatc ttttcggtat ggagaacttt gccgtgaaga ccataccgct gggccgctgg
     1741 ggcacgccgc aggatatcgg acacatggtc acttaccttg ccagtccggc ggcggattgg
     1801 ataaccgggg gcatctttgt ggtcgacgga ggggcttggt tgaagtgacg gaagcgccat
     1861 gttcctaggg cactacggcg tcgcattcgc gctcaagcgc gtcgagccca aggtctcatt
     1921 ggggacattt tttctcgccg tgcaactggc agatctgctg tggggagtgt ttctgctgct
     1981 ggggtgggag cacgcgcgca tcgtccccgg ctacacgccg gtgacaccgt tcgagtttct
     2041 ggactatccc atatcgcaca gtttggttgc cgcactggtg tgggggctgg ttgcggcggc
     2101 gttctattat tcgtggccga cccgggatac tacccgtcat tggcaagccg cggcgctggt
     2161 cggcgcggcg gtcttcagcc actatccgct ggatgttctg gtccacgtgc cggatctgcc
     2221 gatcgcgggc aacgattctc ccaagatcgg actgggtatc tggaactatc cggtggcaa
//
LOCUS       DASRPQ010002478         1325 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4374566, whole genome shotgun sequence.
ACCESSION   DASRPQ010002478 DASRPQ010000000
VERSION     DASRPQ010002478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1325
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4374566"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..344)
                     /locus_tag="VFD73_27790"
     CDS             complement(<1..344)
                     /locus_tag="VFD73_27790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77774.1"
                     /translation="MRVLIIGGTNFIGPLVVTALHELGHEVTLYHRGEHEAALPSAVR
                     HIHSPRAGIPVLHFPSSLSDPPPEVVLHMFPVGDDDARAAAARFAGVARRMVAISSGD
                     VYRAYGRLMGTEP"
     gene            complement(358..>1325)
                     /locus_tag="VFD73_27795"
     CDS             complement(358..>1325)
                     /locus_tag="VFD73_27795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77775.1"
                     /translation="GRTGAAARQAAYALAIDSTAKSARDLQAAVRTARAATFEPSATW
                     SNDSDDNTSFSQSVAAASSIGERLRVFGSANALQASDPIREGRRVGAEAGITLTEGKL
                     QLSGAGGARRLAPEDAPSRTAATYRGRLSFRPISQLGLSLGYSRLPFDETAALIERAL
                     DMESLEGGLDLRPTSGLTLFGGAGRLWLSDGNARSNYSAGVTQKIQQRFFAGLFGRTL
                     KYEQRGVGYFSPDRFWVLETVAGYNGEHRRWIAGFSGGLGAQQVGAQGVAQTEWHVEG
                     RVGPRWGGDGGNRLELFGLLTNSAVSSTTGAFRYGALGLNARLTL"
BASE COUNT          237 a          436 c          408 g          244 t
ORIGIN      
        1 ggttccgtcc ccatgagccg gccgtaggcc cgatatacat caccactgct gatggcgacc
       61 atccgacgcg cgacgccggc aaagcgagca gcggctgccc tggcgtcgtc gtcgcctaca
      121 ggaaacatgt gcagtaccac ctctggcggc ggatcactca ggctggatgg aaagtgaagg
      181 actggtattc cggcgcgagg gctgtggatg tgccgcaccg ctgaagggag tgctgcttcg
      241 tgttcgcccc gatgatagag cgtcacctcg tggccgagtt catggagagc ggttaccacc
      301 aaaggcccaa tgaagttggt gcctccgatg atcagcaccc gcatggccac ctcgcggcta
      361 caaagtgagc ctcgcgttga ggcctaaggc gccatacctg aacgccccgg tcgtcgagct
      421 gaccgcgctg ttggtgagca ggccgaagag ctccaaccga ttgccaccgt ctccgcccca
      481 gcgagggccg acgcggcctt ccacgtgcca ttcggtttgc gctactccct gagctcccac
      541 ctgctgcgcc cccaacccac cgctgaagcc ggcaatccac cgacgatgtt ctccgttgta
      601 cccggcaacg gtttcgagca cccagaaacg gtccggtgaa aaatacccaa ctcctctctg
      661 ctcatacttc agggtgcggc caaagagacc ggcaaaaaat cgttgctgga tcttttgagt
      721 gacgccggcg gagtagttcg accgggcgtt tccatcgctg agccagagcc gaccggctcc
      781 accgaacagg gtgagtccgg aagtcggccg aaggtcaagg cctccctcga gcgattccat
      841 gtccaatgct ctctcgatca gggcggcggt ctcatcaaaa ggcagtctgg agtagcccag
      901 gctaagtccc agctgcgaga tcggtcgaaa gctcagccgg ccgcgataag tcgcagcggt
      961 gcggcttgga gcgtcttccg gtgcaaggcg ccttgcaccg cctgcccccg agagctggag
     1021 cttcccctcg gtcagggtaa ttcccgcttc cgctcccacc cggcgtcctt cccggatggg
     1081 gtcactggcc tggagagcat tggccgagcc aaagacccgt aggcgttctc cgatcgagga
     1141 tgcggcggcc actgactgcg aaaaactggt gttgtcgtcg gagtcgttgc tccaggtggc
     1201 gctgggctcg aatgtggctg ctctcgccgt ccgcacagca gcctggaggt ctcgggccga
     1261 tttcgccgtc gagtcgatcg ccagcgcgta cgctgcctgc cgggctgctg ctcccgttcg
     1321 gccct
//
LOCUS       DASRPQ010002479         2516 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1243291, whole genome shotgun sequence.
ACCESSION   DASRPQ010002479 DASRPQ010000000
VERSION     DASRPQ010002479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2516)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2516)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2516
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1243291"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="VFD73_27800"
     CDS             complement(<1..182)
                     /locus_tag="VFD73_27800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77776.1"
                     /translation="MQPTLDTVQPEQWSWMLTQLWSWVWSGMSWILDLQHILFGFLFD
                     GTPGMLVLKSTLLLLP"
     gene            589..1107
                     /locus_tag="VFD73_27805"
     CDS             589..1107
                     /locus_tag="VFD73_27805"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HZI77777.1"
                     /translation="MTSNRADTGTGPLQPGTQAPDFSLSSKPGTELRLSDLRGRPVIL
                     VFYPADWSPVCGDELALYNEVLPEFRRHEAEVLGISVDGVWCHQAYAAARHLEFPLLS
                     DFEPKGAVSRAYGAYRIKDGFSERALFLVDREGVIRWSYLSPVDVNPGVDGVLDALDA
                     LPTPTATAGGRA"
     gene            1104..1643
                     /locus_tag="VFD73_27810"
     CDS             1104..1643
                     /locus_tag="VFD73_27810"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HZI77778.1"
                     /translation="MSTRLRVPLTERDHLMGPADAPVTLLEYGDYECPHCRRAHPIVA
                     SVLQQMGGQVRFAYRHFPLTRVHPHAQHAAEMAEAAGERGVFWQMHDLLFENQDALED
                     EDLLGYAARLDIDPDWALAALRSGRYAERVQQDFMSGARSGVNGTPTFFINGIRHDGA
                     WDEDSLIEALQRALPATAR"
     gene            1655..2110
                     /locus_tag="VFD73_27815"
     CDS             1655..2110
                     /locus_tag="VFD73_27815"
                     /inference="COORDINATES: protein motif:HMM:NF015438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HZI77779.1"
                     /translation="MAGRLEAIWIKRAHRGPMDPVARGSLVAGRGLVGNADQGRRRQV
                     TLIEREKWDDLMQKLNASVSPSARRANLLISGVPLAGSRDQVLWIGGCRLRIAGETRP
                     CERMDEALPGLRKLMALDWGGGVFAEVLDGGDIAVGDEVRWEAEVSVLV"
     gene            complement(2166..>2516)
                     /locus_tag="VFD73_27820"
     CDS             complement(2166..>2516)
                     /locus_tag="VFD73_27820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77780.1"
                     /translation="NLGRVALAAHDVTGAKQHADAFLQGATAKKNDAQIRLGHELLGA
                     IALEEKQFARATAELNQGNQQDPYTLYRLGQASQGSGDAGKAAEYFRRAADQNTLPTL
                     NLAFIRTKIRKAKV"
BASE COUNT          449 a          757 c          834 g          476 t
ORIGIN      
        1 atcggcagca gaaggagggt cgacttcagc accaacatcc cgggtgtgcc atcgaagaga
       61 aagccgaaga ggatgtgctg aagatcgagg atccaggaca tgcccgacca cacccagctc
      121 cacagctggg tcagcatcca gctccactgc tccggctgca cggtgtcgag ggtaggctgc
      181 ataggggtat tgcctccagc tgttcgcagg aagacagact gaacacttcg gggtttgtgc
      241 gattcgcggg cggaagcgca agcgacgtgc cgcctgactg cagggctcgt cgctagccgg
      301 taccgatctg tgagcagcgg agttgcggtg tggcagagag gtcccctgcc ctggcatgcc
      361 gcgccctcag ccatgcagcc gaccagcgtt gaggcgaagt gcgctcccgg cgcgagtgaa
      421 agagcttgca gcacctcaca ttggactggg tctcttcacc acttattgag tcagagtggg
      481 ggctctttgc atcgcggcgg gcgatacgac tatcgtgcag caggactgcg ctcgtcggta
      541 tgttgtctcg aggaaggaag tgaggcggta atgactggac cacaaggcat gacttccaat
      601 cgcgcggaca ctggcactgg accgctccag ccagggactc aggcgccgga tttttcactg
      661 tcaagcaaac cggggacgga gcttcgactc tcggatttac gaggccggcc ggtgattctg
      721 gtcttctatc ccgcagactg gagtcccgta tgcggggatg aattggcgct ctacaacgag
      781 gtgctgcccg agttccgccg ccacgaggcg gaagtgctcg gcatttcggt ggacggagtt
      841 tggtgccacc aggcgtatgc cgcggcgcgc catctggaat ttccgctgct cagcgatttc
      901 gagccgaagg gagcggtgtc gcgcgcctac ggcgcgtacc gcatcaagga tggtttctcc
      961 gaacgtgcgc tctttctggt ggaccgcgag ggcgtgattc gttggagcta tctctctccc
     1021 gttgacgtca atcccggagt tgatggtgtt ttggacgcgc tcgatgcgct gcccacaccg
     1081 actgccactg ccggaggacg cgcatgagca cccgtttacg agttccgcta acggaacgcg
     1141 atcacctgat gggtccggct gacgcaccgg tcaccttact ggagtacggg gattatgaat
     1201 gtccccactg ccgcagagcg caccccatcg tggcatcggt ccttcagcag atgggaggac
     1261 aggtgcggtt tgcctaccgg cactttccgc tgacccgggt ccacccccac gcccagcatg
     1321 ctgcggagat ggccgaagcg gccggcgagc gtggggtctt ctggcagatg catgacctgc
     1381 tcttcgagaa ccaggacgca ctcgaggacg aagacctcct gggctatgca gcgcggttgg
     1441 acatcgaccc cgattgggcc ctggcagcac tccgatccgg caggtatgca gagcgggtcc
     1501 agcaggattt catgagcggt gcccgaagcg gggtaaacgg tacgcccacg tttttcatca
     1561 acggcatccg gcacgacggc gcctgggacg aagattcgct gatcgaggcg ctgcagcgcg
     1621 cactgccggc gacagcgaga tagcacgcag cacaatggcc ggacggctcg aggcaatctg
     1681 gatcaagcgg gctcaccggg gcccaatgga cccggttgcc cgagggtctc tcgtagccgg
     1741 acgaggactg gtcgggaacg ccgaccaggg ccgtcgacgc caggttacgc tgattgaacg
     1801 ggagaagtgg gatgatctga tgcagaagct gaacgcatcc gtgtcgccct cggcccgtcg
     1861 cgccaacctt ctgatcagcg gcgttccgct ggcggggagc cgagaccagg tactctggat
     1921 cggcgggtgc cgcctccgga tcgcgggtga gaccaggcca tgcgagcgaa tggatgaagc
     1981 actccccggc ctccggaaac tgatggctct ggactggggt ggcggagtat tcgcggaagt
     2041 cctcgacggc ggtgacatcg ccgtaggcga cgaggtccgc tgggaagcgg aagtgtcagt
     2101 cctcgtctga taatcagtct gagtgccagg cggggacgct cgcgcgtccc gcctcgttgc
     2161 actggtcaca ccttcgcctt cctgattttg gtcctgataa aggccaggtt gagcgtgggc
     2221 agcgtgttct ggtcggctgc ccggcgaaag tactcggccg ctttgcccgc gtctccactc
     2281 ccctgagacg cctgccccag ccggtacagg gtatagggat cctgctgatt tccctggttc
     2341 agctctgccg tggcccgggc gaactgcttc tcttccagcg caatggctcc cagcaactcg
     2401 tgcccgagcc ggatctgggc atcgttcttc ttggccgttg cgccctgcag aaaggcgtcg
     2461 gcgtgctgtt ttgctccggt gacatcatgg gcggcgagtg ccacccggcc caggtt
//
LOCUS       DASRPQ010002480         1149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1243443, whole genome shotgun sequence.
ACCESSION   DASRPQ010002480 DASRPQ010000000
VERSION     DASRPQ010002480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1243443"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..452)
                     /locus_tag="VFD73_27825"
     CDS             complement(<1..452)
                     /locus_tag="VFD73_27825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HZI77781.1"
                     /translation="MAWLVLVSGWLGNAAAQQFSFRQYAQSDGLTNLAAGYLVTDPSG
                     DLWVGTDGGLFRFDGTAFVSYDTDRGLPSETVRGMALDPWGRLWVSLDRGLYVGGARG
                     FEPVHTQTGPVLTDHSLPIAFLGKDHILVAYKAHVQELRREQPDSGPW"
     gene            complement(640..1068)
                     /locus_tag="VFD73_27830"
     CDS             complement(640..1068)
                     /locus_tag="VFD73_27830"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZI77782.1"
                     /translation="MNTRMRLTLAGVLLSTCLVTGTAGAADQGKNAATVQPLLTRDLP
                     DIPGKEVVMLTVEYLPGGASLPHRHDAEVFVYVLEGSVVMQVDGQNAVTLGPGGTFHE
                     GPSDIHRQSANASATQPAKFLVFMIKDKDKPATRPVASAK"
BASE COUNT          218 a          353 c          376 g          202 t
ORIGIN      
        1 tgccagggtc cggagtccgg ctgctcgcgc cgcagctcct gcacatgagc cttgtaggca
       61 acgagaatgt ggtccttgcc caggaaggca atcggtagtg agtggtcggt cagaacgggt
      121 ccggtctggg tatgcaccgg ctcaaagcca cgggcaccgc cgacatacag gccccggtcc
      181 aggctgaccc acagtcgtcc ccacggatcc agagccatcc ctcgtacggt ctcggagggc
      241 aggccgcggt cagtgtcgta agagacgaag gcggtcccgt cgaatcggaa cagtccgccg
      301 tcggttccga cccataggtc cccgctcggg tcggtgacca ggtagcccgc agcgagattg
      361 gtgagtccat cgctttgagc gtattggcgg aagctgaatt gttgcgccgc agcgttcccg
      421 agccagcccg acaccagtac cagccaggcc accgtccaaa gccgggagcg agcgcgcgag
      481 ggcaagtgcg acatatcgcg atcgtagcga caccgcggga cgaagcttgc gaccggctcc
      541 gcagaaacta cgaggcacag gattcactcg cccgaagggc agctgaattc gctgaaattc
      601 ctcgctattg cggcccagtt cacgacttgc cgcagcaagc tattttgcgc ttgcaacagg
      661 gcgcgtggcg ggtttgtcct tatctttgat catgaacacc aggaacttcg cgggctgggt
      721 ggcgctggca ttggccgact ggcgatggat atccgacggg ccctcgtgga aggtcccgcc
      781 gggacccagt gtcacggcgt tctggccatc gacctgcatc acgaccgagc cctccagcac
      841 gtagacgaac acttccgcgt cgtgcctgtg gggcagcgag gcgccacccg gtaggtattc
      901 cacggtcagc atgaccactt ccttgccggg aatgtccggc agatcccggg tcagaagggg
      961 ttgtacggtc gcggcgtttt ttccctggtc ggcggcacct gcggtaccag tcaccaggca
     1021 ggtggagagc aggacgccag ccagtgtgag acgcatacgg gtgttcatgg atcgatggcc
     1081 cctgagagtt gttgctgcag gatgcgccag cctgcgggct ctcaacaaga gccaagaacg
     1141 ggagatccg
//
LOCUS       DASRPQ010002481         1776 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_618362, whole genome shotgun sequence.
ACCESSION   DASRPQ010002481 DASRPQ010000000
VERSION     DASRPQ010002481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1776
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_618362"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..621
                     /locus_tag="VFD73_27835"
     CDS             <1..621
                     /locus_tag="VFD73_27835"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZI77783.1"
                     /translation="SRIEQAARECGVADLLERSARQLSGGEGQRVNLARALALRTPVT
                     LLDEPLSGIDRITRGHLLADLPRLLATFATTSILVTHDREEAFRLADRLVVLMEGQVK
                     AAGPKKSVYTHPPDRHTAELLGYTVLAAEEKLVAIPPGGLRAGPGTLSFRLLVKRVVD
                     MGNHVHVVGTVGDQPVDVRWPEGAPPAAEGSEITVCPGPGAVVLGA"
     gene            complement(628..1056)
                     /locus_tag="VFD73_27840"
     CDS             complement(628..1056)
                     /locus_tag="VFD73_27840"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HZI77784.1"
                     /translation="MNRLRIVAFLLAAMTSACGGGSDSGVTTPTGQGSNPPPPGSAAV
                     TIQDFSYNPQNVTIKVGTTVRWTNAGPSAHTTVSDAGLWNSGTLAAPGGGGGYGGGGG
                     NTAGGTFQFTFSQAGTFTYHCSIHPPTLYPGFTGTITVTP"
     gene            complement(1372..>1776)
                     /locus_tag="VFD73_27845"
     CDS             complement(1372..>1776)
                     /locus_tag="VFD73_27845"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HZI77785.1"
                     /translation="SATAAYALTRATNPEVKSFAKMMMVEHHALRVQGQHLAKQLNVT
                     PEPVADDPLKPAVQSEMTALKGAAKGAAFDRTYIQQEIGIHKAVLDLAAKAHDQTQTE
                     QLKKLIEQAKPVIEKHLNRAEAIQKKLGTPSA"
BASE COUNT          305 a          552 c          577 g          342 t
ORIGIN      
        1 tctcgaatag aacaggcggc gcgggagtgc ggcgtagccg atctgctgga gcgctccgcg
       61 cggcagctga gcgggggtga ggggcagcgg gtcaatctcg cgcgcgcgct cgcccttcgg
      121 acgccggtga ccctgctgga cgagccgctg tccggcatcg atcggattac ccgcggtcac
      181 cttctggccg acctgccccg cctcctggcg acatttgcca ccacatccat cctggtcact
      241 cacgaccggg aagaggcgtt ccgcctggcc gatcggctcg tggtgctcat ggaagggcag
      301 gtgaaagcgg ctggcccgaa gaaatcggtc tatacccatc ctccagaccg gcacaccgca
      361 gagctcctcg gctacacggt tctcgcggca gaggaaaagc tggtggccat acctccaggc
      421 ggcctgcgcg ccgggccggg aacactcagc ttccggcttc tcgtcaaacg agtggtggac
      481 atgggtaacc atgtccacgt ggtgggcacg gtcggcgatc agccggtgga cgtccgctgg
      541 ccggagggag ctcctccggc cgcggaagga tccgagatta cggtttgccc tggccccgga
      601 gcagtggtcc tcggggcgta accctgccta gggcgtaacg gtgatggtcc ccgtaaaacc
      661 tggatacagc gttggcgggt gaatgctgca gtgataggta aaggtccccg cttgactgaa
      721 ggtgaactgg aacgtccctc cagcggtgtt gccgccgcca ccgccataac ctccaccgcc
      781 ccccggagcg gcgagcgttc cactgttcca gagacctgcg tcactcacag tggtgtgggc
      841 cgatgggccc gcattggtcc agcgaacggt ggtgcccacc ttgatcgtga cgttctgcgg
      901 gttgtagctg aaatcctgga tggtgactgc ggccgaacct ggagggggcg ggttcgaccc
      961 ttgcccggtc ggtgtagtca ctcccgagtc gcttccaccg ccgcaggccg aggtcatggc
     1021 tgccagcagg aaagcaacga tacgcaatcg attcatggtc accttctttc gaatcggcac
     1081 tttggcgaac ctgctctcac cgcgccgctg cggcaatcga actgagagcc gtgccaggga
     1141 cactgcacgc tccggcgatc ctgactgcgc cggcaagcga tccattaatg tgagtaccac
     1201 gatcgggacc ggcgtattcc cttcggtggt gacatctcct gaacaaagag gacgagcccg
     1261 ggcaaagcgt ctgcacgcag aagctgcagg gctgggtgta gcaaagcgct ccctaaactg
     1321 gtcgagcctc cggccgacaa agcgccggag gctcttaacc gaggacaaag gttacgctga
     1381 aggagtgccc agcttcttct gaatcgcctc ggcccggttc aggtgcttct cgatgaccgg
     1441 cttggcctgc tcgatcagtt tcttgagttg ctcggtctgg gtctggtcat gcgccttggc
     1501 cgccagatcg agtaccgcct tgtgaatgcc gatctcctgc tggatgtacg tccggtcgaa
     1561 ggcagcgccc ttggcggctc ccttgagggc cgtcatttcg ctctgaactg cgggcttcaa
     1621 gggatcgtcg gccacgggct cgggagttac gttgagctgc ttggccaggt gctgtccctg
     1681 aacccgaagg gcatgatgct cgaccatcat catcttggcg aatgacttga cctccgggtt
     1741 ggttgctctg gtgagcgcat aggcagccgt cgcgct
//
LOCUS       DASRPQ010002482         2087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2495096, whole genome shotgun sequence.
ACCESSION   DASRPQ010002482 DASRPQ010000000
VERSION     DASRPQ010002482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2495096"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(182..1756)
                     /locus_tag="VFD73_27850"
     CDS             complement(182..1756)
                     /locus_tag="VFD73_27850"
                     /inference="COORDINATES: protein motif:HMM:NF015038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI77786.1"
                     /translation="MTSPGDLDALSPTELKALVLELLGKVAALEQTVAAQREEIARLK
                     GLKGRPALKPSGMEKASEPKPPSPPKGRRGPVTPRVAVEDRILAAAVPPGSRFKGYAD
                     FVVQDLVLRVRCIRYRRERWLTPDGQLIVAPLPSGVDGHFGPELRRFVLAQYHQGQVT
                     LPRLVAQLRAIGLAISTRQVMRLLIDRQQGFLNEARDVLRAGLRQAAWITVDDTGARH
                     KAANGTCTQIGNDHFAWFGTTASKSRLNFLELLRAGHPDYVINAEALAYMRERGLSGL
                     VTQQLASQPERSFPDRAAWQAYLERLGIPDLKVSPDPVRIATEGALWGAIKAHGLLPG
                     TVIVSDDAGQFLVGCHALCWVHAERLVHKLDTFTDHQRRAQQSQRALIWWFYRDLKAY
                     QREPTPRRRSELRARFDRIFQRQTGFVVLDRLLARLHANKPELLRVLDRPEIPLHTNG
                     SENDIRAQVTRRKVSGGTRSDTGRDCRDAFLGLAKTCAKLGLSFWDYLGARLAVPDQP
                     AIPYLPDIVRSRCSPA"
BASE COUNT          368 a          667 c          707 g          345 t
ORIGIN      
        1 cccgctttgt ataccccggc cgactctacc agagcgaaca ccgctctaga tcgtataacg
       61 gacggcgccc aacgtttgtg gccgtgcgtc tcacgtttgg cgcagcgatc tgagctgggt
      121 ctcgcgatta agtgcagcgt ctcaaattat gtgcaggtaa cagcggcaaa actgatggcg
      181 gttaggccgg gctacagcgg ctccggacga tgtcgggcag atacgggatc gcgggctggt
      241 ccgggacggc gagcctagcg ccgaggtagt cccagaagct gagaccgagc ttggcacacg
      301 tcttcgccag gccgagaaag gcgtctcggc agtcgcgtcc ggtgtcgctg cgggttccgc
      361 cgctcacctt gcgccgggtg acctgggcgc ggatgtcgtt ctccgatccg ttggtgtgca
      421 gcgggatctc agggcgatcc agcacgcgca gcagctcggg cttgttggcg tgcaaccgcg
      481 cgagcagccg gtccaggacg acaaagccgg tctgacgctg aaagatccga tcaaatcgtg
      541 cccgcagttc gctccttcgt cgcggggtcg gctcgcgctg gtaagcctta aggtcgcggt
      601 agaaccacca gatcagggcc cgctgggact gctgcgcccg gcgctggtga tccgtgaagg
      661 tgtcgagctt gtgcacgagg cgctcggcgt gcacccagca cagcgcatgg cacccgacca
      721 ggaactgacc ggcatcatcg ctgacgatca ctgtcccggg cagcaggccg tgagctttga
      781 tcgcacccca gagcgcgccc tcggtggcga tgcgcaccgg atcggggctg accttcaggt
      841 cgggaatgcc aagccgctcc agatacgcct gccaggccgc ccgatccggg aaggaccgct
      901 cgggctggct tgccagctgc tgggtgacca gcccggatag gccccgctca cgcatgtagg
      961 ccagggcttc ggcgttgatc acgtaatccg gatggccggc gcgcaagagt tcgaggaagt
     1021 tcagccggct cttgctggct gttgtaccaa accaggcgaa gtggtcgttg ccgatctgcg
     1081 tgcaggtgcc gttcgcggcc ttgtggcggg ctccggtgtc atccaccgtg atccaagcgg
     1141 cttgcctcag cccggcgcgc agcacgtcac gagcctcatt gagaaagccc tgctggcgat
     1201 cgatcagcaa gcgcatgacc tgccgggtgg agatggccag accaatggcc cgcaactgcg
     1261 ccaccaagcg cggcagagtg acttgcccct gatggtactg ggccagcaca aagcggcgca
     1321 gctccggccc gaagtggcca tcaaccccgc tcggcagcgg tgccacgatc agctgcccat
     1381 ccggcgtcag ccagcgctcc cggcgatagc ggatacagcg gactcgcaag accagatctt
     1441 gaaccacgaa atctgcgtag cctttaaacc gcgagccggg cggcacggca gccgcgagga
     1501 tccgatcctc gacagccacg cgcggcgtca ccgggccgcg gcggcccttg ggagggctgg
     1561 gcggcttcgg ctcgctggcc ttttccatgc cactcggttt gagcgctggc cggcccttca
     1621 gccctttgag ccgcgcgatc tcctcgcgct gggccgccac tgtctgctcc agggccgcca
     1681 ccttgcccag caactcgagg acaagcgcct tcagctcggt cggggaaagg gcgtccaggt
     1741 caccgggtga agtcatgctc ccagggaatc agaggcaagc gcgtcgggga agcgaaaacc
     1801 gcgccgatgc caccggttct gccgctgtta cggaatgtgg tgcagctcgg gcgagccctc
     1861 aggcccgctc atccgccacc gccaagtgag gcaccgccaa gtgagggaaa attactccgc
     1921 cctctacacc aggtgaaggg ttctggcagg ggcggcctgc aggatggcca gcacagtcat
     1981 gctgcggcga ggaggaactg gagtctgcgg cagtcggcgg gcacgtgttg atgatggcgg
     2041 gagcgagggc ggaggaagtt gtgcagttca tcgtaagcgc gacagaa
//
LOCUS       DASRPQ010002483         1827 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_618509, whole genome shotgun sequence.
ACCESSION   DASRPQ010002483 DASRPQ010000000
VERSION     DASRPQ010002483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_618509"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1827
                     /locus_tag="VFD73_27855"
     CDS             <1..>1827
                     /locus_tag="VFD73_27855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 dependent-methionine synthase
                     activation domain-containing protein"
                     /protein_id="HZI77787.1"
                     /translation="NDPVREAIHSVFLYHAIEAGMDMGIVNAGQLPIYSDIPPELLER
                     VEDVVLNRRADATDRLLEIADSVKGHATEQVADLAWRNAPVAERLSHALVEGIADYIV
                     EDTEEARHLAERPIQVIEGPLMAGMNVVGDLFGAGKMFLPQVVKSARVMKRAVAHLIP
                     YIEAEKLALDEQGNGQPKSNGKVLLATVKGDVHDIGKNIVGVVLQCNNYEVIDLGVMV
                     PSAKILETAKREQVDIIGLSGLITPSLEEMSFVAGELEHEGFDIPLLIGGATTSRVHT
                     AVKIEPKYSGPTVHVLDASRAVGVAGQLRSGELRPGFVAGVRAEYQELRTQRGSRRAE
                     ERRQSITDARRNRLAIDWQALRPPRPCFLGVRPLTDYPLEELVPYIDWTPFFQTWELA
                     GHYPAILDDPKVGPAARGLFRDANALLERIVSEHLLQARGVLGFFPANSVGDDIQLYA
                     DDDRTSRGPVVHTIRQQMVKPPGRPNLALADFVAPEDSGVPDYIGAFAITAGIGADAL
                     ADGFVQEHDDYNAILSKALADRLAEAFAERLHQRVRQEFWGYARDERLDNQGLIKERY
                     QGIRPAPGYPACPGHTEKRTLFDLLRVESHAGISLTESYAMLP"
BASE COUNT          342 a          584 c          586 g          315 t
ORIGIN      
        1 aacgatcccg tccgcgaagc gatccactcg gtcttcctgt accatgccat cgaggccggc
       61 atggacatgg gaatcgtgaa cgccgggcag cttccgatct actcggatat cccgcccgag
      121 ctgctcgagc gggtggaaga cgtggtcctg aaccggcgag ccgacgccac cgaccggctg
      181 ctggagatcg ctgattcggt caaaggccac gccacggaac aggtggccga tctggcctgg
      241 cggaatgcgc ccgtggccga gcggctctcc catgccttgg tcgaagggat tgccgactac
      301 atcgtggagg acaccgagga agcccggcac ctggccgagc gtcccatcca ggtgatcgaa
      361 ggtcccctca tggccggcat gaacgttgtc ggtgacttgt tcggcgccgg aaagatgttt
      421 ctgccccagg tcgtgaagag cgcccgtgtg atgaagcgcg ccgtggccca cctcattcca
      481 tacattgaag ccgagaaact ggcgctggat gagcagggca acggccagcc gaagtcgaac
      541 ggcaaggtgc tgctcgccac tgtcaaggga gacgtccacg atatcggcaa gaacattgtg
      601 ggcgtcgtgc tccagtgcaa caactacgag gtcatcgacc ttggcgtcat ggtaccatcg
      661 gccaagattc tcgagacggc caagcgggag caggtggaca tcatcgggtt gagtgggctc
      721 atcaccccgt ccctggagga gatgtccttt gtagcgggag agctcgagca cgagggcttc
      781 gatattccgc tcctgatcgg cggagccacg acctcccgag tccataccgc cgttaagatc
      841 gagcccaagt acagcggccc taccgtccac gtcctcgatg cttctcgcgc cgtgggcgtg
      901 gcgggccagc tccggagtgg agagttgcgg cccggtttcg tggccggggt tcgagcggag
      961 tatcaggagc ttcgcactca gcggggaagc cgaagagcgg aggagcgccg ccaatcgata
     1021 accgatgccc ggcggaaccg acttgcgata gactggcagg cgcttcgtcc cccgcggcca
     1081 tgctttctcg gcgtacggcc gctgaccgat tatcccctcg aagagctggt gccgtacatc
     1141 gactggacac cgttcttcca gacttgggag ctggccggac actatcccgc tatcctggac
     1201 gatcccaagg tcggcccggc ggcgcgcggc ctgtttcgcg acgcgaatgc cctgctcgag
     1261 cgcatcgtca gcgagcatct gctccaggcc aggggcgtgc tcggcttctt tccagccaac
     1321 agcgtgggcg acgacatcca gctctatgcc gacgacgatc gcacctcacg cggcccggtc
     1381 gttcacacca ttcggcaaca gatggtgaaa ccgccgggcc ggccgaatct ggcgctggcg
     1441 gatttcgtcg ctccggaaga ttccggtgtc cccgactaca tcggcgcctt tgcgatcacc
     1501 gccgggatcg gtgccgatgc gcttgccgac ggcttcgtgc aggagcacga cgactacaat
     1561 gccatcctta gcaaagcgct cgccgatcgc ctggccgagg cgtttgccga gcggctgcat
     1621 cagcgagtgc ggcaggagtt ctggggctac gctcgagacg agaggctcga caaccagggc
     1681 ctgatcaagg agcgctacca gggaatccgg ccggcacctg ggtatccggc ctgcccgggt
     1741 cacaccgaaa agcggacact attcgacctg ctcagggtag agtctcacgc aggcatcagc
     1801 ctgaccgaga gctacgccat gctgccc
//
LOCUS       DASRPQ010002484         6403 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4071924, whole genome shotgun sequence.
ACCESSION   DASRPQ010002484 DASRPQ010000000
VERSION     DASRPQ010002484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6403
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4071924"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..669
                     /locus_tag="VFD73_27860"
     CDS             <1..669
                     /locus_tag="VFD73_27860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HZI77788.1"
                     /translation="RNHREAILRQVLEPLQDSYDYIVVDCPPSLGLLTLNVLAAANAV
                     LIPIQCEYYGLEGISQLLNTIRLVQQKINPGLAISGVLLTMYDARLNLCRQVAEDAKE
                     YFGAKVFVTPIPRNVRLAEAPSFGKPILLYDVQSVGAKSYLAVAQELLRRVENSNVTI
                     EQPADHQPAAEQPALEEPPVGQHGLESAAGHPTSLADGSAPEAAVASDQQLSDQLPEV
                     TTHD"
     gene            662..1546
                     /locus_tag="VFD73_27865"
     CDS             662..1546
                     /locus_tag="VFD73_27865"
                     /inference="COORDINATES: protein motif:HMM:TIGR00180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HZI77789.1"
                     /translation="MTETKRLGRGLEALLGSVSREQAQASGSLRELPVDNIVPNPFQP
                     RTHINETDLAELASSIEASGLLQPVVVRPRNGKYELIAGERRWRAVQRLGWPKIPAVI
                     KEADDQALLTLALIENLQRDDLSPIDEAAGYLRLSEEFQLAHAEIARLVGRDRSTVAN
                     LLRLLRLPESIKRLLRERRLSEGHGRALLAVSDEEAMIRLADQAINQDWSVRELETRA
                     KEASPPQAAPNGRTRPVQKMPSADVRRVEDALRKRLGTDVRLTSRRRGRGFLSISYYS
                     NDDLARVLELILGEPFAG"
     gene            1543..2340
                     /locus_tag="VFD73_27870"
     CDS             1543..2340
                     /locus_tag="VFD73_27870"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HZI77790.1"
                     /translation="MKRRKRSRSLTILIQRDGTTRTRALRLPLWSVRLAAWLAGSLAI
                     LLIIITALYGPMVRAAARVPVMERELARLRAENTRVRELSAALDSAESRYAQVRQMMG
                     GTIVPDPVAKSSELPVAPPVRARLAATVLAEGGVSPPRHWPLDESGYVTRGQVKATGR
                     DEAHPGIDIAVPVGSIVRASGGGTVEKTGEDPEYGLYVLLDHSEDYQSMYGHLSRTLV
                     TPSATVTAGQVIGLSGNTGRSTAPHLHFEIRQRGMSLDPRTLVKEGH"
     gene            2340..2762
                     /locus_tag="VFD73_27875"
     CDS             2340..2762
                     /locus_tag="VFD73_27875"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HZI77791.1"
                     /translation="MGIFSGSARDEKGNELKRRRTDQIPFSIIASDMTVIGDLETEGV
                     VRIEGRVRGSVRVGSQVLVAQGAVIEGDLHTQEAVIAGQVSGAINARERIELQATAMV
                     AGDILTPRISIVEGARVTGEVKMDVKSAGEAVGTSHNS"
     gene            2887..3876
                     /locus_tag="VFD73_27880"
     CDS             2887..3876
                     /locus_tag="VFD73_27880"
                     /inference="COORDINATES: protein motif:HMM:NF014647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family protein"
                     /protein_id="HZI77792.1"
                     /translation="MLLTLACGSPQTSGMKVALVTPGSVTDAAWNSGAYAGLLRIRDS
                     LHVHISHIEARTPAEQDDALRTYAAQGYDLVFAHGFEFQDVAERVSASYPHTAFIVTS
                     GRRARLNVSPLIFRLEEASYLAGMVAGRLTKTNVLGFIGGIELPPIKAAYQGWLNGAR
                     SVNPRIQSRAVYLNSFDDVAAGREAALALIGAGADVFHHNADAAALGLFQAVKQHPGV
                     YVFGANTDQASLAPGHVPGSAVIDLPHAFLLVATELKQGTFVPHVEVFGLKSEVVKYV
                     PDPALAGLVPDSLKREMKAASDSIINGTLLAAPRPGSMEAGIPGTPHDTALRT"
     gene            3873..4670
                     /locus_tag="VFD73_27885"
     CDS             3873..4670
                     /locus_tag="VFD73_27885"
                     /inference="COORDINATES: protein motif:HMM:TIGR00486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051540 - metal cluster binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HZI77793.1"
                     /translation="MTVSASLADVSRYLDEYLQIKDIPDEPNAVNGLQVENAGEIGGI
                     IAAVDASQATIDGVVAALEPDRPAPLLLVHHGLLWDGNQPLTGRRYRRMATLLEHDIP
                     VYAAHIPLDVHPEVGNNAVLAERLGIEVAGWFGNYRGHPIGVWGHAPTNLATRESVTL
                     ELDLVLHAVRGSATLIPGGPEHPGRIGIITGGAGNMIAAARDAGLQTFITGEGPHHTY
                     FDAMEWGLNLIYAGHYATETLGVQAMASHLAERFNIEWEFHDHPTGL"
     gene            4675..6153
                     /locus_tag="VFD73_27890"
     CDS             4675..6153
                     /locus_tag="VFD73_27890"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZI77794.1"
                     /translation="MPPALELVGIHKRFGSVQALRGADFSLARGELHALLGENGAGKT
                     TLMHVAIGMVRRDAGEVRIDGVPQSITSPRAARALGIGMVHQHFTAVPAMTVAENIAL
                     FAGWNGTPGKISEQARSAAQRLGLPLDPDQRAGRLSVALKQRLEIVKALSANARILLL
                     DEPTAVLAPAEAQELLSVIRAYTEGGRSAVLITHKLDEALRAADRITVLRQGAVTYTG
                     TAASQTRDSLARAMIGPSPDLPFTSVHRAVTPAARDFGSALIKLEALEVARESGYGLA
                     VRPATLSVRAGEIVGVAAVEGNGQRELLRAVAGRIMPLRGKAEVARPIGFIPEDRSTE
                     GLIPELTLVENVVLGSEKDAPWLRRRRIQWAAARSHTTALLEEYGIAAAGPGAKAGSL
                     SGGNQQKLVVARELSRNPRVLVAENPTRGLDVSAAAQIHNRIRRTAAQAAAVLFYSSD
                     LDEVLSLADRIVVVARGSLRGVPPGASRDAVGALMLSSDRQS"
     gene            6150..>6403
                     /locus_tag="VFD73_27895"
     CDS             6150..>6403
                     /locus_tag="VFD73_27895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77795.1"
                     /translation="MSRLGWAVAALGLGLILLAGGLEAAGYDAAGALGALWSGAFGSW
                     YSISSGTLPRSVPLILIGLGLALGFRGGALNIGAEGQFYAG"
BASE COUNT         1234 a         1905 c         2022 g         1242 t
ORIGIN      
        1 cggaaccatc gagaagcgat tctgcggcaa gtccttgagc cacttcagga tagctacgac
       61 tacatcgtag ttgactgccc tccgtcgctc gggctactga ccttgaacgt cttggcagca
      121 gccaatgcgg tgttgatccc aattcagtgt gagtactacg gattggaagg aatatcacag
      181 cttcttaaca ctatcaggtt agtgcaacag aaaatcaatc ctgggctcgc aattagtggg
      241 gtccttctca cgatgtacga cgctcgactg aatctgtgcc ggcaagttgc ggaagatgcc
      301 aaggagtact tcggggccaa ggtcttcgtg accccgattc ctcggaacgt ccgtctggca
      361 gaggctccca gcttcgggaa gccgattctg ctctatgacg ttcagtcagt gggagcgaaa
      421 agctacttgg ctgtcgcgca ggaactattg cgacgagtcg agaactcgaa tgtgactatc
      481 gaacagcctg ccgatcacca accagccgcc gaacagccgg cactcgaaga gcctccagtc
      541 ggacagcacg gactagaatc ggccgccgga cacccgacca gcctggcgga tgggtcggca
      601 ccagaggcgg cagttgcctc tgatcagcaa ctgtctgacc aacttcccga ggtgactact
      661 catgactgaa accaaacgct tgggacgtgg actcgaggcg ctcctgggct cagtctcgcg
      721 agagcaggcc caagcctccg gctcgcttcg ggaattgccg gtcgacaaca tagtcccgaa
      781 cccatttcag cctcgcactc atataaatga gacggacctg gctgagctgg cctcctcgat
      841 agaagcatcc gggttgctgc agccagtcgt cgttcgcccc cgcaatggga agtatgaatt
      901 gattgcaggg gagcgccgtt ggcgtgccgt gcaacgtctg ggctggccca agattcccgc
      961 ggttatcaaa gaagcagacg atcaggcact gctcacgctg gccctgatcg agaacttgca
     1021 acgggacgat ctctctccca tcgatgaggc tgccggttac ctccgactca gcgaggagtt
     1081 ccaactggcc catgcagaga tagcccgcct ggtcggacga gaccgctcga cggtcgcaaa
     1141 tcttcttcgg ctgctccgtc ttcccgaatc gatcaagcgt ttgcttcggg aacgaaggct
     1201 ctcggagggt catggtcggg cgcttctggc ggtctccgac gaagaagcca tgatccgcct
     1261 ggccgatcag gcgatcaatc aggattggtc ggtacgcgag ctggaaacac gggcgaaaga
     1321 ggctagtcca ccccaggcgg cgccgaatgg gagaactcgc ccggtgcaga aaatgcccag
     1381 cgctgacgtt cgtcgagtcg aggatgcgct gcgcaagcgg ttggggaccg atgtccgcct
     1441 cacctcacga cgtcgtggtc gcggattcct gagcatcagc tactactcca acgacgactt
     1501 ggctcgggtg cttgagctga tcctgggtga acctttcgcc ggatgaagcg aaggaagcgt
     1561 tcgcgatcgc tcaccatcct tattcaacgt gatggcacaa cccgaacccg agcgcttcgg
     1621 ctccctctct ggtcggtaag gctggccgcc tggctggcag gatcgctggc gattctgctc
     1681 atcatcatca ctgccttgta cgggccgatg gtgcgagcag cagcccgagt cccggtgatg
     1741 gagcgggaac tggcgagatt gcgggcggag aacacccgag tacgcgagct ctctgccgcc
     1801 ctggatagtg cagaatcacg ctacgcccag gtccggcaaa tgatgggcgg aacgatcgtc
     1861 cccgatcctg tggccaaatc ctctgagctg ccggtggctc cgcccgtgcg ggccagactg
     1921 gctgcgacgg tactcgccga gggaggcgtg agtccgccac ggcactggcc tctcgatgag
     1981 tctgggtacg tcacccgcgg acaggttaaa gcaaccggac gagacgaagc gcatcccggg
     2041 atcgatatcg ccgtcccggt gggaagcatc gttcgcgctt ctggcggtgg cacggttgaa
     2101 aagacagggg aagacccgga gtacggtctc tatgttctgc tggatcactc ggaagactac
     2161 cagtctatgt acggacatct ctcgcgcacc ttagtgacac cgtccgcgac agttactgcg
     2221 ggacaggtca tcggcctcag cggaaacact gggcgatcga cagctccgca ccttcatttc
     2281 gagatacggc agcgcggtat gtcgctcgac cccaggacct tggtaaagga gggccactga
     2341 tggggatctt ttccggttcc gcacgcgacg aaaaggggaa cgaactcaaa cgccgccgga
     2401 ccgatcagat accgttctct ataatcgcca gcgatatgac agtaattggc gacctggaga
     2461 cagaaggcgt tgtccggatt gagggacggg tgcgggggag cgttcgagta gggtctcaag
     2521 tgctcgttgc gcagggagcg gtaatcgagg gagatctgca cacccaggaa gcggtcattg
     2581 ccggccaggt gagcggggca atcaatgcgc gcgagcggat agagctacag gctactgcca
     2641 tggttgccgg agacattctc acgcctcgaa tatcgatcgt agagggagct cgagttaccg
     2701 gtgaggtcaa aatggacgtg aaatctgccg gtgaagcagt gggaacttcc cacaatagtt
     2761 gaaaattcac ctaagtgtgt tgacaataaa atcttgactt gacccttccc acgccggccg
     2821 gtgcaactct tcgcacttcg tttcggatta cctgccttta gacgcagctg gcacaatgct
     2881 gctgttatgc tgctaacact tgcctgcggc tcacctcaga cttccggaat gaaagtggcg
     2941 ttggtaactc ccggttcggt gaccgacgcg gcatggaact ccggtgcata cgccgggcta
     3001 ctccggattc gtgattccct gcacgtccac atcagtcata tcgaagcgag aactcccgct
     3061 gagcaagacg acgcgctccg cacctatgct gctcaaggtt acgatttggt cttcgcccat
     3121 ggctttgagt tccaggatgt ggccgaacga gtgtcagcga gctatcccca tactgcgttt
     3181 atagtgacgt caggccggcg ggctcgcctc aacgtctcac ccctgatctt tcgacttgaa
     3241 gaagcgagct atcttgcggg catggtggcc gggcgtctca ccaagacgaa cgtgcttggg
     3301 tttatcggcg gtatcgagct tcccccaatc aaggccgctt accagggctg gctcaacgga
     3361 gcccgctcgg tgaatccgcg gattcagagc cgggcagtgt atctcaacag cttcgatgat
     3421 gtcgctgcgg gacgggaagc ggcgctcgcc ttgatcggtg ctggtgcgga cgtctttcat
     3481 cacaatgccg atgcggccgc cctgggattg ttccaggcgg tcaagcagca tcccggggtg
     3541 tatgtattcg gtgccaacac cgatcaggcc agccttgcgc cgggccacgt tccgggcagt
     3601 gccgtgatcg acctgcccca tgcctttctt ctggttgcca ccgagctcaa gcagggcacc
     3661 tttgtgccgc atgtcgaggt ctttgggctc aagagcgaag tggtcaaata cgtgccagat
     3721 cctgcgctgg ccggcctggt tcccgattcc ttgaagagag agatgaaggc agcgagcgat
     3781 tccataatca acggcaccct tctggccgcg cctcgtcctg gctccatgga ggctggaatc
     3841 ccgggaactc ctcacgatac cgcgctccga acgtgacggt cagcgccagc cttgccgatg
     3901 tcagccggta cctcgacgaa tatctccaga tcaaggacat tccggacgag cctaacgcgg
     3961 tcaatggatt gcaggtcgag aacgccggag agatcggcgg gataattgcc gcagtcgatg
     4021 cgtcccaggc gacgatcgac ggagtggtgg cggcactgga gccggatcgg cctgctccac
     4081 tgctcctggt ccaccacgga ctgctctggg acgggaatca gccgctcacc ggtaggcgct
     4141 atcgccggat ggcgacactc ctggagcatg acatcccggt ctatgccgcc cacattccac
     4201 tggatgtaca tccggaggtt gggaacaacg cggttttggc ggagcgactg ggcatcgagg
     4261 tcgcaggctg gttcgggaac tatcgagggc atccaatcgg cgtctgggga cacgctccga
     4321 ctaatctggc cacccgcgag tcagtcacct tggagctgga tctcgttctc catgccgtga
     4381 ggggcagtgc gactctgatc cccggtggac cggagcatcc gggccgcatc ggtatcatta
     4441 cggggggcgc tggaaatatg atcgccgccg cgcgggatgc cggtctgcag acatttatca
     4501 ctggtgaggg tccgcaccac acctattttg acgcaatgga atgggggctg aacctgatct
     4561 atgccggcca ttacgcgaca gaaacgctcg gtgttcaggc aatggcctcc catctagcgg
     4621 agcgcttcaa tatcgagtgg gaatttcacg accatccgac cgggctctga cctggtgcca
     4681 cccgcgctcg agctggtcgg catccacaag cgattcggct ccgtgcaagc gttgcgcggg
     4741 gccgattttt ctctggcccg tggtgagctc cacgcgcttc tgggggagaa cggcgcaggc
     4801 aagacgacgc tgatgcacgt ggcgatcggc atggtccgac gtgatgcagg agaggtgcgg
     4861 atcgacggtg tgccgcaatc aatcacctcg ccgagggctg cgcgagcgct ggggatcggg
     4921 atggtccacc agcactttac cgccgttccc gcaatgaccg tcgccgagaa tatcgcgctg
     4981 ttcgccgggt ggaatggaac accgggaaaa atttcggagc aggcccgaag cgcggcgcaa
     5041 cggctcgggc taccgctgga tcctgatcag cgcgccggcc gactttccgt tgcgctgaag
     5101 cagcggctgg aaatcgtgaa ggcactctcg gccaacgccc ggattctctt gctggatgag
     5161 ccaaccgctg ttctggcgcc cgccgaagct caagagctcc tgagcgtgat ccgtgcctac
     5221 actgagggcg gccgctcggc cgtgcttatc acccacaagc tggatgaggc gcttcgagcc
     5281 gccgaccgca tcaccgtttt gcgtcagggc gccgtcacct acaccggcac tgccgcgagt
     5341 caaacgcgcg actcgctggc ccgtgcaatg atcggtccca gtcccgacct gccgttcacc
     5401 tcggttcatc gtgcggtgac accggcggct cgcgattttg gctcggcgct gatcaagctg
     5461 gaagcattgg aagtcgcccg cgagagtgga tacggtctgg cggtgcggcc cgcgacgctc
     5521 tcagtacgtg cgggggagat cgtgggagtg gcagcggtgg aaggaaacgg ccagcgagag
     5581 ttgctgcggg cagtcgcagg acgaatcatg ccgctccggg gcaaggccga ggtcgcccga
     5641 cccatcggct tcatcccgga agatcgttcg accgagggtc tcattcccga gttgacgctg
     5701 gtggaaaacg tggtcctcgg ctccgagaag gatgctccct ggctccggcg gcgccggatt
     5761 cagtgggcgg ccgcccggag ccataccacc gcattgctgg aggaatacgg gattgcggcg
     5821 gccggaccgg gagcgaaggc cggctctctg agcggcggaa accagcagaa gctggtcgtg
     5881 gcgcgagagc tctcccggaa ccctcgtgtc ctcgttgccg agaatccgac tcgcggcttg
     5941 gatgtgagcg cggccgcgca gatacataac cgcatccgga gaacggcagc tcaggcggca
     6001 gcggtcctct tctattccag cgatctggat gaagttcttt ccctggccga caggatagtc
     6061 gtcgtagcgc gcggcagcct gcggggggtg ccacctggtg cctcccgcga tgccgttggt
     6121 gcgctcatgc tcagtagcga cagacagtcg tgagccgctt gggatgggcc gtcgctgcac
     6181 tgggcctggg tctgatcctt cttgcgggag ggctcgaggc cgcgggctat gacgcggcgg
     6241 gtgcactcgg cgccctgtgg tcgggcgctt tcggttcatg gtacagcatc agctcgggca
     6301 ccctgcctcg cagtgtgcct ctcattctga ttgggttggg tctggcactc ggcttccggg
     6361 gaggtgcgct caacatcggc gccgaaggcc agttctacgc tgg
//
LOCUS       DASRPQ010002485         1144 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4072204, whole genome shotgun sequence.
ACCESSION   DASRPQ010002485 DASRPQ010000000
VERSION     DASRPQ010002485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4072204"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..344)
                     /locus_tag="VFD73_27900"
     CDS             complement(<1..344)
                     /locus_tag="VFD73_27900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77796.1"
                     /translation="MTTDRTAIDTTTPAVVLKFDPNVMHHGGLGVIRSLGRAGVPVYG
                     VHEGPWAPAANSRYLAGRCFWQPDPADVERVVAGLLRLAERIGRPSVLITTDDAGAIF
                     LAEHGRDLRDWFL"
     gene            complement(394..966)
                     /locus_tag="VFD73_27905"
     CDS             complement(394..966)
                     /locus_tag="VFD73_27905"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZI77797.1"
                     /translation="MTIMEEKTIDSSDVVTLVRRAAEGDRRAWERLVSQYERLIWSIT
                     VEFKLVESDAADVAQTTWLRLLEHIDRIQHPDRVGSWLAATARNECLRNLAARKRVVL
                     GHDDAELNSAVASVPEVDERILANERDQVVRDALSRLPRRWQRLLEMLMADPPVSYAE
                     ISDQLGVPVGSIGPTRGRCLDRLRVLLQTS"
BASE COUNT          226 a          364 c          352 g          202 t
ORIGIN      
        1 aggaaccagt cgcgaaggtc acggccatgc tcggcgagga agatagcgcc ggcgtcatcg
       61 gtggtaatca gcaccgaggg gcggccgata cgctcggcca gccgcagcag gccggccacc
      121 acgcgctcta catcggccgg atccggctgc cagaagcagc gtccggcgag gtaccgcgag
      181 ttggcggccg gagcccaggg cccttcgtgc acgccgtaaa ccggcacgcc ggctcgtccg
      241 aggctgcgga tgacgccaag tccgccgtga tgcatcacgt tcggatcgaa cttgaggaca
      301 accgccggag tcgtcgtgtc gatggcagtg cgatccgtgg tcatcggcgg agtacctgaa
      361 cggtctaggt ccggcatatg agctgagttc cgttcaggac gtctggagta gtacgcgcaa
      421 cctgtccagg cagcgtccgc gggtgggacc gatgctgccg accggaaccc cgagctggtc
      481 ggagatctcc gcataggaaa ccggcggatc ggccataagc atctcgagca gcctctgcca
      541 cctcctgggc aaccgggaca gggcgtcacg gacgacctgg tcgcgttcgt tggcaagaat
      601 acgctcatca acttcaggga cggatgccac ggcgctatta agctcggcgt catcatgacc
      661 aaggaccacc ctcttccgcg ccgccagatt ccgcaggcac tcatttcggg ccgtggccgc
      721 tagccaggag ccaacacgat ccggatgctg gatacggtcg atgtgctcca gcaacctcag
      781 ccaggtcgtc tgggcgacat cggcagcgtc gctctcaacc agcttgaatt caacggtgat
      841 ggaccagatg agcctctcgt actgactgac gaggcgctcc cacgccctcc ggtccccctc
      901 ggcggcacgt cgcaccagcg ttacgacgtc ggaggaatcg atagtcttct cctccatgat
      961 ggtcattagc aggtcctcct atataggatg cgcacgccga ccgctctaat cgggaattcc
     1021 tgacggcggg cagatatagc gctacagcga aaatagaaaa attgctcctg atttatttcg
     1081 gcggcagctt gatcggcggg catggactat gcgcgctgcc tttaataagc ccccgccccc
     1141 ttta
//
LOCUS       DASRPQ010002486         1783 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1245331, whole genome shotgun sequence.
ACCESSION   DASRPQ010002486 DASRPQ010000000
VERSION     DASRPQ010002486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1245331"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(677..1066)
                     /locus_tag="VFD73_27910"
     CDS             complement(677..1066)
                     /locus_tag="VFD73_27910"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HZI77798.1"
                     /translation="MPAAGRVPDPGPRRQVPRPVRRRPQRRRIETVLSGVQMPRMNSV
                     MERWVQTCRRELLDRTLIWNQWHLLHALREFEQFYNSHRPHQGIANARPLLALPPPIP
                     GPTATTRLHIHRRDRLGGILHEYRHAA"
     gene            complement(1041..>1783)
                     /locus_tag="VFD73_27915"
     CDS             complement(1041..>1783)
                     /locus_tag="VFD73_27915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77799.1"
                     /translation="MIGCAAATFLPGCDERVRVTAASSGERPGQGGGDLGATPPDHGP
                     GAVAGQGPATVSLADRAFLAALLHRLPRGVLGRFRLLVRPETVLRWHRDLLARHHAAR
                     SRPRRPGRPRTVRSIRLLVLRLAGENPGWGYRRIHGELLVLGIKVAASTVWEILQQAG
                     IDPAPERTSSTWASFLRSQAGALLACDFFETVTLGGVRLYVLAVIEHASRRIRILGAT
                     PHPTACWVAQAAKNLVLDLEDAGRRARS"
BASE COUNT          302 a          561 c          615 g          305 t
ORIGIN      
        1 ctcccggcac gtgttatcat tgttcgacgg cagctcaagg agaataaacg aataaactag
       61 cggactcgaa tccgcggatt cgaggttcga gtccttggcg gcgcaccggc tgatgacctg
      121 gggtttctcg actccaggtc atttttatgc gcccgttttg tcccggcttt ccgggcgtgc
      181 tggctccgtg cttgctcggc ggtcggatgt tggatgaccg ggcggacagc cagaattggc
      241 cgattggtct agaccggcca ccaggaccct tccggtgcga ctacgcagcg cgatagccgc
      301 cggcagctgc ttcgtgccag gctgatatca gtccatggct cccccgataa aaatgcatct
      361 cggcatgtca gaagactcaa cccacgcaac cgtggctcgt cgccatccca ggcggtgccc
      421 ttccggtgga tagcagactc tgcccctgta gccggtctcg ctcttcgcgt ctgccgaggc
      481 agcgatccag gatctggttc ccggaattta cgtctctcgg ctgttgcccg agggctcttc
      541 gggatccggg ttgtcctagc tgtccggcac catcatgggg acgccgacga tcgggctggt
      601 ggtgaggcct ggtactcctc cgatgacatc gaggttggtg accggggtgt gcttgccgaa
      661 atctcatcca tgcaggttaa gcggcatgcc ggtactcgtg gaggatgcca ccgaggcgat
      721 cgcgtctgtg gatgtgaagg cgagtggtgg cagtcggccc agggatcggt gggggcagcg
      781 cgagcagcgg ccgggcgttg gcgattccct ggtgaggccg gtgggaattg tagaactgct
      841 cgaactcgcg cagcgcgtgc agcaggtgcc actggttcca gatcagggtg cggtcaagca
      901 gctcgcggcg gcaggtctgc acccagcgtt ccatgaccga attcattctc ggcatctgga
      961 ccccgctgag caccgtctcg atccggcgtc gttgaggacg gcgtcgaaca ggccggggaa
     1021 cttgccgtcg cggtcccgga tcaggaacgc gcccggcggc cggcatcctc aagatccaag
     1081 acgaggttct tcgcggcctg ggccacccag caggcggtgg ggtgaggggt tgcgcccagg
     1141 atccggatcc gccggctggc gtgctcgatg accgccagca catacaggcg gacgccgccc
     1201 agggtgacgg tctcaaagaa atcgcaggcg agcagggccc cggcctggga gcggaggaag
     1261 ctggcccagg tggaggaagt gcgctcgggc gccgggtcga tcccggcctg ctgcaggatc
     1321 tcccacacgg tggaggcagc gaccttgatc ccgaggacga gcagctcgcc gtggatgcgg
     1381 cggtaccccc agccgggatt ctctcctgcc aggcgcagca ccagcaggcg gatagagcgg
     1441 acagtgcgcg gccgacccgg gcgcctgggc cgggatctgg ctgcgtggtg gcgcgccagc
     1501 aggtcccggt gccagcgcag caccgtctca gggcgcacca gcagccggaa ccggccaagc
     1561 acgccgcgtg ggagccggtg cagcagggcg gccaggaacg cccggtcggc cagggagacc
     1621 gtggccggcc cttgcccagc taccgctcca ggaccatgat ctggtggcgt agcgccaaga
     1681 tctccgcctc cttgtcccgg tcgctcaccg gaagaagccg cagtaacgcg aacacgttcg
     1741 tcacacccag gtaggaaagt cgcagcagca cagccgatca tca
//
LOCUS       DASRPQ010002487         1349 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_620382, whole genome shotgun sequence.
ACCESSION   DASRPQ010002487 DASRPQ010000000
VERSION     DASRPQ010002487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1349
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_620382"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1300)
                     /locus_tag="VFD73_27920"
     CDS             complement(<1..1300)
                     /locus_tag="VFD73_27920"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HZI77800.1"
                     /translation="MRLHLVRSAIRITVLMTGDAAALLLLGVLLRGVRDQLWLGSGAG
                     SLVNRLVPEGALPLLQLLPAVLLGLIVLDTYGASDRRRDAGRIVAGATLGLGLPFWGY
                     LWSHFSPLVIPGFVLLATIIGMTLILERHLIDCAVRWIWPVGPGAARALLVGSSAEVL
                     GALEYPALADKREVLITGTFDPQELELTRGRAGFNRLCQTIKQLRADTLVLTGPLKDQ
                     PLAVLMEAAGAAGCQLYALTRSYALGGLEFQTVWRRGVPIVALNRPGLRGRQLLLKRL
                     LDVVLSSLGLLLLGPVLVLIAAAIRLTSAGPILFRQTRVGLGGKHFRIAKFRSMVHDA
                     EARRDGLEQDSLYNDQRLFKLKNDPRVTRIGLFLRRTSLDELPQLWNVLTGDMSLVGP
                     RPPLPAEVDLYEEHHYTRFDVKPGMTGPWQVNGRNLITDFE"
BASE COUNT          276 a          431 c          422 g          220 t
ORIGIN      
        1 cctcgaagtc ggtgatcaga ttccttccat tcacttgcca gggcccggtc attccaggct
       61 tgacgtcgaa cctggtatag tggtgctctt cgtaaagatc cacctcggcc gggagcggag
      121 gccgcggccc taccaatgac atgtcgccag taaggacgtt ccataattgg ggcagctcat
      181 ccagactcgt gcgacggagg aagagaccga tccgggttac ccggggatcg ttcttgagct
      241 tgaagagacg ctgatcgttg tagagactgt cctgctccag gccgtcacgc cgggcctcgg
      301 catcatgcac catgctgcgg aacttggcga tcctgaaatg tttgccgccg agccctaccc
      361 gagtctgtcg gaacagaatg ggtccagctg atgtcagccg aatggccgcc gcgatcagga
      421 ccagcacggg cccgagcagg aggaggccga gtgagctcaa gaccacgtcg aggagtcgct
      481 tgagcagcag ctgccgacct ctcaaccccg gtcggttgag cgccacgatg ggaactccgc
      541 ggcgccatac cgtctggaac tcgagacctc ccagggcgta ggaacgcgtc agtgcgtata
      601 actggcagcc ggcggcgcct gccgcctcca taagaaccgc aagcggctgg tctttcagcg
      661 gaccagtcag caccagagtg tcggccctga gttgcttgat ggtctgacac agccggttga
      721 agcccgctct cccccgggtc agctcgagtt cctggggatc gaaggtgccg gtgatcagga
      781 cttctctttt gtccgctaag gccgggtact ccagtgcccc caggacctcg gctgagctcc
      841 ccaccaatag tgcccgggcc gcacccggac cgaccggcca gatccaacgg acggcgcaat
      901 caataaggtg ccgttccagg atcagggtca tgccgatgat cgtcgccaac aaaacgaagc
      961 cggggataac caacggggag aaatgggacc agagatatcc ccagaacgga agtcccagtc
     1021 cgagcgtcgc cccggcgacg atcctgccag cgtctcgccg ccgatcactc gccccgtagg
     1081 tatcgaggac gatgaggcca agcagtaccg cgggcaggag ctgaagcagc gggagggcac
     1141 cttctgggac caaccggttc accaaagaac ccgcccccga tcccagccac agctgatccc
     1201 gtacccctcg cagcagaact ccgagcagga gcagggctgc ggcgtcgccg gtcatgagca
     1261 ccgttatacg gattgccgag cggaccagat ggaggcgcat cacctggtgg gcgcgccggc
     1321 ttagggcgag gcgctctgga acgcgccga
//
LOCUS       DASRPQ010002488         1277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_937542, whole genome shotgun sequence.
ACCESSION   DASRPQ010002488 DASRPQ010000000
VERSION     DASRPQ010002488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_937542"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..729)
                     /locus_tag="VFD73_27925"
     CDS             complement(<1..729)
                     /locus_tag="VFD73_27925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77801.1"
                     /translation="MNSWVIWTVWGTFALVAVLLGFVGRHFSVRTLRYVTAITGVALV
                     VLITRFGLMHPADPAQASANLTNSFTQGADELSAAFFHPLHAGNQVPAPGRIGWVVIA
                     VLAIIGYRMLEAWARRREAPILDTSALGHGRRDGASGKTRDSVIDGQLYDQLVAGLKF
                     QLSAIEVRAPAILPGGSRSNGLASIAEASGVTGGNLAGAVIQFFGMLWPNPRRFKVRV
                     RVESVPGDPPGAENTKVTVSLDEPA"
     gene            1033..>1277
                     /locus_tag="VFD73_27930"
     CDS             1033..>1277
                     /locus_tag="VFD73_27930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77802.1"
                     /translation="MDEFRARRVTDALRDRGVNAHLLRGGLGQFGVRVSLPGGREAEW
                     DTDGTAGLEAQVMRDGMLVGYVPQIEGSEDFSEAQIV"
BASE COUNT          240 a          424 c          402 g          211 t
ORIGIN      
        1 tgcgggttcg tccaggctga ccgtcacctt cgtgttctca gcgcctggtg ggtcgccggg
       61 gacggattcc acccggaccc ggaccttgaa ccgccgcggg ttcggccaga gcatcccgaa
      121 aaactggatg accgcaccgg ccagattacc gccggtgaca ccgctcgcct cggcaatgga
      181 agccagccca ttcgacctgc tgccgccggg caggatcgct ggtgctcgta cttctatcgc
      241 ggatagctgg aatttcagcc cggcgacgag ctggtcatag agctgcccgt ctatcacgct
      301 gtctcgcgtc ttgccggacg cgccatcccg ccggccgtgg ccgagagcag aggtgtcgag
      361 gatgggcgcc tcccggcgcc tcgcccatgc ctcaagcatg cggtagccga taatggcaag
      421 gacggcgatg acgacccatc cgatacgccc gggtgcggga acctggtttc ccgcatgcag
      481 cgggtggaag aaggccgcgc tgagctcatc cgctccttgc gtgaacgagt tcgtaaggtt
      541 ggcggacgcc tgagccgggt cagccgggtg catcaagcca aaccgggtga tgagcacaac
      601 caatgcgacg ccagtgattg ccgtgacgta ccggagcgta cgcacgctga agtggcggcc
      661 gacaaagccc agcaatacgg ccacgagcgc aaacgtgccc cacacagtcc atatgaccca
      721 cgaattcacg ctgctccccc ccaactcaaa cctacgtacg cgtcccatgc cgtccaacag
      781 ctgcaaccgc acatagagca ctgctagatc gctgttgttg cccgatagcg cgaccttggt
      841 aagaaggaga cagcctgaat cccgctgata catcacccca gggacaggcc ttgcacgggg
      901 cgctgcgcag tctcttgccg tggccgcgga gggagacgat tacttgtcat tgccaggtgg
      961 acgatgcccg gtatgcgcaa gcgctcagcc ggcgttaagc gatccttcag gaacgatcat
     1021 tagcttctgg gcatggacga attccgggcc cgccgggtca ccgacgccct tcgtgaccgt
     1081 ggcgtcaacg ctcacctgtt gcgcgggggc ctgggccagt tcggcgtccg cgtgtcactg
     1141 cccggcggcc gcgaagccga gtgggacacc gacggcacag ccggcctgga ggcccaggtc
     1201 atgcgcgacg gcatgctcgt cggctacgtg ccccagatcg aaggctccga ggacttcagc
     1261 gaagcccaga tcgtcga
//
LOCUS       DASRPQ010002489         1372 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3127351, whole genome shotgun sequence.
ACCESSION   DASRPQ010002489 DASRPQ010000000
VERSION     DASRPQ010002489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1372
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3127351"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..294
                     /locus_tag="VFD73_27935"
     CDS             <1..294
                     /locus_tag="VFD73_27935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HZI77803.1"
                     /translation="PYQRTGHRVDARVSEHAVEMFFGGKRVATHRRSHLKGRHTTCPE
                     HVPERHRAHPAWNPERLIAWAARTGPATAQLIEAIMANRPHSELGYRLTNHTT"
     gene            complement(623..1093)
                     /locus_tag="VFD73_27940"
     CDS             complement(623..1093)
                     /locus_tag="VFD73_27940"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZI77804.1"
                     /translation="MHEVLLRTYDDQVCSIARALEVVGERWSLLIVRDALLGLTRFQQ
                     FQDSLGIARNVLTNRLARLVRAGVFERVRYQQHPERFDYRLTPMGHQLFVPLLALMQW
                     GDQHLAGSMGPPRVAQHTVCGGDLRAGLTCHQCQLPVPAHQVKVVPGPGHDPSE"
BASE COUNT          250 a          468 c          434 g          220 t
ORIGIN      
        1 ccctaccagc ggaccggcca ccgggtcgac gcgcgggtca gcgagcacgc cgtcgagatg
       61 ttcttcggcg gcaagcgggt ggccactcac cggcgcagcc acctcaaagg ccgccacacc
      121 acctgccccg agcacgtgcc cgaacgccat cgggcgcacc cggcctggaa ccccgaacgg
      181 ctaatcgcct gggcagcccg caccggcccg gccaccgccc aactcatcga agcgatcatg
      241 gccaaccgcc cgcattccga gctgggctac agactcacca accacacgac ctgaaggagg
      301 tgacccggca gccaagccgt cgctgacgct ccgaccccac cccccagtac tgccccaata
      361 ccaccggaac aggtgctcca aaacctccgg actcagtgct ccattacgcc ggaatccgca
      421 tctgaaggag tgaaggatca agcgccgcct acagcggcgc agtggagttg ccggtggggc
      481 ggtcgtcgcc tggctacggc aagcggaccc gcgacagtgc gcgcggccct ggcggaccgt
      541 gctcggtcac gcccgcttgc cgtggcggca cagctgatta aatccctcga cgattctcgg
      601 tgcggcgtcg tgttgtgtcc tgtcattcgg atgggtcgtg gcccggtccg ggcacgactt
      661 tcacttggtg ggcagggacg gggagttggc actggtggca ggtcagtccg gcgcgcagat
      721 cacccccgca taccgtatgt tgcgcgaccc gcggtgggcc catcgacccg gccaggtgct
      781 ggtcacccca ttgcatgagg gctagcagcg ggacgaacag ttgatggccc atcggggtga
      841 gccggtagtc aaagcgctcg gggtgttgtt ggtagcgcac tcgctcgaag actccggccc
      901 tgaccagtcg ggcgagccgg ttggtgagca cgttgcgggc gataccgagg ctgtcttgga
      961 actgctggaa tcgggtcagt ccgagcaagg cgtcccggac gatgagcaga ctccagcgct
     1021 ctcccaccac ctccagggct cgggctatgg agcacacctg gtcgtcatag gtccgcagta
     1081 acacttcatg cacctctcct ccgcgagttt accgattggg ttgctcgaca ggacggaccc
     1141 ctctacggtt agttgcatta aaaaactcac tcggatctca gggcagagca gtgatcatgg
     1201 accttggctc tggcggcggt tgcggcgtgg cggaacgcat cgccgacgtc gatccgcagc
     1261 gtcacgccgg gtggccacct cgctggtcgc aggagatcca tgccgagaca ggaccacaat
     1321 cccatgaacg ccatacccag ctatgccacg gcggtcacgg tcacgctgtg ca
//
LOCUS       DASRPQ010002490         2687 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3127696, whole genome shotgun sequence.
ACCESSION   DASRPQ010002490 DASRPQ010000000
VERSION     DASRPQ010002490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2687
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3127696"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(11..646)
                     /gene="ribA"
                     /locus_tag="VFD73_27945"
     CDS             complement(11..646)
                     /gene="ribA"
                     /locus_tag="VFD73_27945"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: protein motif:HMM:NF001591.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HZI77805.1"
                     /translation="MPGIQRVAASQLPTRYGEFHMIVYRSAGGLEHVALLACPTDRRD
                     RRRPALVRVHSECITGDAFGSARCDCGQQLDASLRYLQRQGSGILLYLRQEGRGIGLG
                     NKIRAYALQDRGYDTVEANLALGLPEDARDYAEAAAMLADLGIRQVHLLTNNPAKIAG
                     LERHGIVVVDRIPLEVASNSHNARYLSTKRDKMGHLLTTPSPPASSWERHG"
     gene            1633..2518
                     /locus_tag="VFD73_27950"
                     /pseudo
     CDS             1633..2518
                     /locus_tag="VFD73_27950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013844528.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT          449 a          843 c          937 g          458 t
ORIGIN      
        1 tggtgaggcg tcacccgtgc ctctcccatg atgaggcggg gggcgagggc gtcgtgagga
       61 gatggcccat cttgtcgcgc ttcgtgctga gatagcgtgc gttgtgcgag ttggatgcca
      121 cctccaatgg gatccggtcg acgacgacga tgccgtggcg ctcgaggcca gcgatcttgg
      181 ctgggttgtt agtgagcagg tgtacctgcc ggatgccgag gtcggcgagc attgcggctg
      241 cctccgcgta gtcacgggcg tcctccggca ggccgagggc gaggttggcc tcgacggtgt
      301 cgtaaccccg atcctggagg gcgtatgcgc ggatcttgtt gcccaggccg atgccgcggc
      361 cctcctgacg caggtagagc agaatgccgc tgccctggcg ttggaggtag cggaggctgg
      421 cgtcgagctg ctggccgcaa tcgcagcgcg cggagccgaa ggcatcaccg gtgatgcact
      481 ccgagtggac acgcaccagg gcagggcggc gcctatcccg cctatccgtc gggcaagcga
      541 gcaaggcgac gtgctccagc ccgcccgcgc tgcggtagac gatcatgtgg aactcgccat
      601 agcgcgtggg cagctgggag gcggcaaccc gctggatgcc tggcatggct gacccagtat
      661 cctttccgtc cgttccgggc actgcgaaga tggggaagcc cgtttcgagg cgctcgccgg
      721 cgctgcaggc cgcactatcc aggcacagcg gcatccagca gcgcacggct ctcggtctgt
      781 cctgttctgc cctgtgagga tacgtgccgc aagagcaatg cctcgttcgt gcctgccacc
      841 ttcgccgcct gccagtccgt gggtcaggtc gtgatgaggt cggaccgacg ccggtccaac
      901 cggccacgta ggtggcggtc ctgagcgaag gctactgcgt gcatcacaag gcatcagaga
      961 acgatggcca cgctattcag cgttcgcatc ctggccagga ggacgagtca gcgtgccgca
     1021 actgcctccc cacctcctgt gccacacctc tggactggat agtacttggg tgacagtgct
     1081 tgttggcgca tcgcgaccca atcgtgctga agacgatgtc cggcctcgtc tccttgacga
     1141 agatacccat cacgatctcc aggctgtggc ggggatgtag gtcatccgct ctgaccgggt
     1201 ctcgatcctc gattggggcg cgctggagct gaacatcagc aggctcaagc ggggcaatct
     1261 gcatgggcag gaaagcggat agccaggaga gtctgagacc gtagctcaca gtcctgacct
     1321 gtcgtcccgc acgtacacga tgattcgccg tgcacctaag cgttgcagga gcgcctgcga
     1381 ctcgatcaca aggcgagagt gcgccaatag gtcgccagtg cgccaaaggc ggcatcaagc
     1441 gttgtgatgt ccaaatcaag ctcggtggtc aactgttgga aggcggcctg ccactcggca
     1501 gggggcggct taaggttgtc tagagggtgt ctgaaaaggc tctgggccta gaaaatgcga
     1561 catagctgaa gcatacagca tgtatcgttt gatcgctgtg gaggcgctgg tttcctggga
     1621 ggaggcgctc gcatggcgca ccgtcgctgg tatgctaccg acctgacgga cagagaatgg
     1681 gcgctcattg cccctctgtt accaccggcc aagccgggcg ggcggccccg ctcgacggat
     1741 ctgcgcgagg tgctcaatgc cctcagctac tggctgcgca gcggcggggc gtggcacctg
     1801 ctgccgcacg acttcccgcc ctggaagacg gtgtaccact acgggcgcac ctggcgcctc
     1861 agcggggatt gggagcggat ccacgcggtc ctgcgcgagc ggacgcgcca gcgcgccggc
     1921 cgcgagctga cgcccagcgc cggcatcatc gacagccaat ccgtcaagac gacggaaagg
     1981 gggggccggc caactcagca ggctacgacg ggggcaagaa ggtgaagggg cgcaaacgcc
     2041 atctgctggt cgatacgctg ggcctggtgg tcaaagcgct ggtccacccc gctgatgtcc
     2101 ccgatggcga gggcggccag cgcctgcttg cggccattcc ccacctcgcc accgtcctgc
     2161 cgtcctgccg cgtctgcgcc acctgtgggt cgacggcgcc tatcaagggg gggtcaaaga
     2221 cggggtcgag cagacgcggg gctggacggt cgcggtcgtc aagcgcccct cgcgctgggt
     2281 ctgggtggga ccagggcagg agccgccgga ggggccgcgg ggctttgtgg tgctgccgcg
     2341 ccgctgggtc gtcgaaagga cgttcggctg gctgggccgc tggcgccgct ccagcaagga
     2401 ctacgagtac ctgccgcaga cctcggagtg cgtcatctac ctggcgatga tccgcctcat
     2461 gctccgccgg cttgccgaaa ccgaggcaag aagccttttc agacaccctc taggctgatg
     2521 cgcaggtacg cggcaacgcg ctaccgcggc cagcgctctt ccacggccag ccggaccacc
     2581 tgacgcaggc gcgggtgcaa ctgttccaca gccgcggtca gcttggcgcg cgtcacgacg
     2641 cggtctgtgc cgtcgggtcg gagaaagcca gggtggcgtc cggctct
//
LOCUS       DASRPQ010002491         1961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3127731, whole genome shotgun sequence.
ACCESSION   DASRPQ010002491 DASRPQ010000000
VERSION     DASRPQ010002491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3127731"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /locus_tag="VFD73_27955"
     CDS             <1..426
                     /locus_tag="VFD73_27955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77806.1"
                     /translation="QLTLRNGIGLTAGYASRSQRTENNGNATELDGSDLTGSLSYAFS
                     LPTSISRTHKRVRSSLTALSSKTLTCLQQGALPGCTVVSDLRRQEFRGGLDTDLLKTV
                     SGGLQFGYSINDARHLNNRTSQLFILMSLQLSLYAGDYR"
     gene            524..1450
                     /locus_tag="VFD73_27960"
     CDS             524..1450
                     /locus_tag="VFD73_27960"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HZI77807.1"
                     /translation="MRLPKNLSVVSILSILSIFFSACRERPRPPREFNGPAAFKYIEQ
                     QVAFGPRVPGTRAHEEMAAWLDSVLHQRADTVVVQRWNHVTVDKKTLPLRNFIARFKP
                     EATQRILYLAHWDSRPVSDSPLSKDSSHAVMGANDGGSGVALLLGVADVLKRAPPTIG
                     VDLLFDDGEDYGDFTKAPADVLIGARYYAAHQLPGPGPLYAVLFDLVADKDLQIYQEG
                     NSLVGAPEVVELVWNTAKDLNYSGYFIDSPRHTLIDDHLELQKAGIRAIDVVDFDYPA
                     WHTQYDTIDKVSAASLQIVGDVAVALIRRGGT"
     gene            1515..>1961
                     /locus_tag="VFD73_27965"
     CDS             1515..>1961
                     /locus_tag="VFD73_27965"
                     /inference="COORDINATES: protein motif:HMM:NF024245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HZI77808.1"
                     /translation="MPPAERRALLLLLALGVTGHAVRYLLTRPGEPPGQVQLLSVLPP
                     GSPRAQRDSAMRQARPLADEEKIDIELASASEVARLPRIGLRLAKTIVADRNAHGPFG
                     NLAGLDRVPGVGPGLLQVIGPHVIFGGQAATPLAEAACSGPRQSRCA"
BASE COUNT          367 a          636 c          594 g          364 t
ORIGIN      
        1 cagctcacct tgcggaacgg catcggcctc accgccggct atgccagccg ttcccaacga
       61 accgagaaca acggcaatgc caccgagctc gacggaagcg atctcaccgg gtcgctctcg
      121 tacgcgttct cgctccccac ctcgatcagc cggacacaca agcgggtacg gtcgtccttg
      181 accgcgcttt cgtccaagac gctcacctgt ctgcagcaag gcgcactgcc gggctgcacc
      241 gtcgtctccg atctgcggcg gcaggagttt cgcggcggcc tcgacaccga tctgctgaaa
      301 acggtgagcg ggggactcca attcggctat tcgatcaacg atgctcggca cctgaacaac
      361 cgaacctcgc agctgttcat cctgatgtcg ctgcagcttt cgctctatgc aggggactat
      421 aggtgacgga cagacggaga ggcggcggga cggagaggcg gagagacgga acaggcggag
      481 aggaggaacg gacggaaact gtgggacccg attagtttag ggaatgcgcc ttccgaaaaa
      541 cctctccgtc gtttccatcc tctccatcct ctccatcttc ttctccgcct gccgtgaacg
      601 gccgcgacct ccgcgtgaat tcaacggacc ggctgcattc aagtacatcg agcaacaggt
      661 agcatttggg ccacgagtgc cggggacacg ggcgcatgaa gaaatggccg cgtggctcga
      721 cagcgtgctg caccagcgcg ctgacacggt ggtggtgcag cgctggaatc atgtgaccgt
      781 agataagaag acactaccgc ttcggaactt catcgcccgg ttcaagcccg aggcgaccca
      841 gcggatcctg tatttggcgc attgggatag ccggccggtg tcggacagtc ctctgtccaa
      901 ggactccagt cacgcggtca tgggagccaa cgacggcggc tcgggcgtgg cgctcctcct
      961 cggtgttgcc gacgtgctca aacgtgcgcc accgacgatc ggtgtcgatc tgctgttcga
     1021 tgacggcgag gattacggag acttcaccaa ggctccggcc gacgtgctca ttggcgcgcg
     1081 atactacgcg gcccatcagc tgcccggccc gggcccgctc tacgccgtgc tgttcgatct
     1141 cgtcgccgac aaggacctgc agatctatca ggagggaaat tctctggtgg gagcgcccga
     1201 ggtggttgaa ctggtctgga acacggcaaa agatctgaac tacagcggtt acttcattga
     1261 ttcaccccgc cacacgctga tcgacgatca tctcgagctc cagaaagccg gaattcgagc
     1321 gatcgatgtg gtcgacttcg actatcccgc ctggcacacc cagtacgaca cgatcgacaa
     1381 agtcagtgct gcgagcctgc agatcgtcgg cgatgtcgcg gttgccctca tccgccgggg
     1441 cggtacgtag cttttcgccc cgggcggagc gctttgactt accgcctgac cgacgtaccg
     1501 ccttaccgtc tcgcatgcct cccgcagaac gccgggcgtt gctgctcctg ctcgctctcg
     1561 gtgttaccgg tcacgctgtg cggtatctgc tcactcgtcc aggtgagccg ccgggacagg
     1621 ttcaactgct ctccgtttta ccgcccgggt ctccccgggc ccagcgagac agcgccatgc
     1681 ggcaggcgcg gccgttggcg gatgaagaaa agatcgacat cgaattggcc agcgcctctg
     1741 aagtggcgcg gcttccgaga atcggccttc gactcgccaa aaccatcgta gccgatcgta
     1801 acgcccacgg tccctttggc aatctggccg ggctggatcg ggtgccaggg gtcggcccag
     1861 ggcttctgca ggtcattgga ccgcacgtca tcttcggtgg acaggccgca accccgctgg
     1921 cagaagcggc ctgctccggc ccacgccaat cccgctgtgc c
//
LOCUS       DASRPQ010002492         3845 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_938038, whole genome shotgun sequence.
ACCESSION   DASRPQ010002492 DASRPQ010000000
VERSION     DASRPQ010002492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3845
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_938038"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(162..1565)
                     /locus_tag="VFD73_27970"
     CDS             complement(162..1565)
                     /locus_tag="VFD73_27970"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HZI77809.1"
                     /translation="MKSVIRAWRLGLAVVVSTMLIGVGNAASAGTSTDWSAYLDGPAH
                     SSFNAADTAITPGKATTLVQKWKFSGDPATMPGQPGPALFSSPTVAGGAVYIGANTGW
                     FYKLNEATGAVNAKVFLGYQPRLTCAARGLISTAAVVADPSDGQDTVYVGAPDGYLYA
                     LRASDLSIKWRAVIDVPSTTVNDFFMWSSPTVANGKIYIGSASHCDKPLTRGALVGYD
                     QATGKEFARFFTVPPGILGGGIWTSAAVDSSGFVYASTGTQPKTTTNRYYSVSIVKLD
                     PNTLQPLASFTVPNSQLGGDGDFGGSPVIFGSYVGACNKNGIFYALNRSTMTVAWKTK
                     IGAKSSGSSVAQCSAAPIYDSTSLYVAGDPTTIGGVSYEGSIRRLDPSTGAILWQTGL
                     PDSALGSPAMNGGGVIAVGTFDYTTTPDAVYLVNASTGKILRTLTTGGHYFAQSVFAN
                     GMLFTASTTGKLTAWGL"
     gene            2537..3340
                     /locus_tag="VFD73_27975"
     CDS             2537..3340
                     /locus_tag="VFD73_27975"
                     /inference="COORDINATES: protein motif:HMM:NF021098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRC and DUF2382 domain-containing protein"
                     /protein_id="HZI77810.1"
                     /translation="MFTQEEIQNLTGATAYDQAGKKVGQVATVYQDQATGEPEWLTVK
                     TGLFGMKETFVPLALAQVRGAGEVGLAADKDTITSAPKIDPDGELSRAEEEQLYSYYG
                     QRYGEPGSPGGLAGTSGQAMTDAYGAPGAQGYDTSGPTTDEAMTRSEERMHVGTATQE
                     AGRARLRKYVVTETVQQSVPVSHEEVRLEREPITEANIGQAMDGPEISEEEHEVTLHA
                     EQPVVAKEAVPVERVRLAKEQVTGEETVSGEVRKEQIETDTDGDTGTLR"
BASE COUNT          683 a         1229 c         1268 g          665 t
ORIGIN      
        1 cctccccgaa cccgactgct gccggacctt acagcagcac cgctactaca cgcgagccgc
       61 cgtcagcgcg agtcagagag gcgacagccg gaacgccgat ccggtgcgtc atgatctgcc
      121 gctccacgcc gctgcatgag attgacctta tctggccgtg cttacagacc ccatgcggtc
      181 agtttcccgg tggtgctcgc ggtgaacagc atgccgttgg cgaagacgct ctgggcgaag
      241 tagtgcccgc ccgtggtcag ggtcctaagg atcttcccgg tggaagcgtt gaccaggtag
      301 acggcgtcgg gcgtggtggt gtaatcgaag gtacccacgg cgatcacccc gccgccgttc
      361 atggcgggac tgccgagggc ggaatcgggc aggcccgtct gccacagtat ggcaccggtg
      421 cttggatcca gccgccggat cgagccctcg taagagaccc cgccgatcgt ggttgggtca
      481 ccagccacgt acaacgaggt gctgtcgtag atgggcgcgg ccgagcactg ggccacgctg
      541 gacccactgg acttggcccc gatcttcgtc ttccacgcca ccgtcattgt ggaccggtta
      601 agcgcgtaga agatcccgtt cttgttgcag gcgccgacgt aagagccgaa gatcaccggt
      661 gagccgccga agtcgccatc gccgcccagc tgagaattgg gcacggtgaa cgaagccagt
      721 ggctgcagcg tatttgggtc aagcttgaca atcgacaccg agtagtagcg gttggtggtg
      781 gtcttgggct gggtaccggt cgaggcgtac acgaagccag agctgtctac cgctgcgctg
      841 gtccagatcc cgccgccgag gatcccgggt ggcaccgtga agaaccgggc gaactccttc
      901 ccggtcgcct ggtcgtagcc aaccagggcg ccgcgggtca gcggcttgtc acagtgagac
      961 gcactgccga tatagatctt gccgttcgcc accgtagggg acgaccacat gaaaaagtca
     1021 ttgaccgtgg tggatgggac gtcgatgacc gcgcgccact tgatggacag atcgctcgcc
     1081 cgcagcgcat acaagtaacc gtccggggcg ccgacgtaga cggtatcctg gccgtcgctt
     1141 gggtccgcca cgaccgcggc ggtggaaatg agcccacggg ccgcgcaggt gagtctcggc
     1201 tggtaaccga ggaacacctt ggcattcacg gcgcccgtgg cctcgttcag cttgtagaac
     1261 cagccggtgt tggcaccgat gtacaccgcc ccgccagcta cggtcgggct ggaaaacagc
     1321 gctggccccg gctggccagg cattgttgcc ggatccccgc tgaacttcca cttctgcacc
     1381 agcgtcgtgg ctttgccagg cgtgatcgcg gtatctgccg cattaaacga ggaatgcgcg
     1441 ggcccgtcca ggtaggccga ccagtcagtc gacgtcccgg cggacgccgc gttgccgact
     1501 ccgatgagca tggtggaaac aaccacggct agccccagcc gccaggcacg gataacagat
     1561 ttcactgtgc aaacccctcc tcggccgtct tacgcgctgg tcgctccgcc aggcacatga
     1621 cctgtcgaca ggaacgatca gacggggctg ctacccccac ggcacggaac gcagcgggaa
     1681 gctgagggtt gaaagcccct tgaagaccta gtattgcgcc tccagccgtt agtgcacagc
     1741 cccgcgtcca ggctgtctca tcccgtgtca ctccgtctgc cccgtcgcgc tgccgggccg
     1801 cgcggaggac tgttgctact acacgcttta ctgcagtgcc cgagacgcaa agggccctct
     1861 ccccactggg aaagggcctt gagctgcgga aactagtagc ggggcgggat ttgaacccgc
     1921 gacctgtggg ttatgagcca tacgacgtgc gtctctgccg tctcgcatcg tctctggtcg
     1981 ccacgcggac ctcggaggac ggacggcggg cgttcgtatc cggcccgctg catctccctc
     2041 gtctcaagcc gtcccgccgc gtcttgtgca caaatccgtg cacaaatctg attactgaga
     2101 gcctggccgt ccccgctcag atgctgggtt gggaggggtg actgtgggcc ccttcacctt
     2161 gccgtccaac ggatacgcgc cagaggcgct cacttcggag agcatccgta gatcagtgcg
     2221 gcgcgtccgg gcggtgcgcc ggaatccgta gctgcacgtc aaagtccgcg aggttgtccg
     2281 gtgcgggtgc ctaggtccgg ggcggtccga cagttcgtga gacggctgtg agataccggc
     2341 gcccctggcg ggcttgtcga tgttctgggt gggttccggc ccgatatggg gcctatgcgc
     2401 tggtcagaac atgatccgcc attttggcat gattttctgg cttgatggtg gttcgttcaa
     2461 ccaaccgggg gtaaggcggc gggttcgtgt actcaaatta gctccctggc tggggggagc
     2521 agctcgagga gactgtatgt ttacccagga agagatccag aacctgaccg gggccaccgc
     2581 ctatgaccag gccgggaaga aggtcggcca ggtggccacc gtctaccagg accaggcgac
     2641 cggcgagccg gagtggctga cggtcaaaac gggcctgttt ggcatgaagg aaaccttcgt
     2701 gccgctggcc ctggcccagg tccgcggggc gggcgaggtg ggactggccg ccgacaagga
     2761 caccatcacc tcggcgccga agatcgaccc ggacggcgag ctgtcccggg ccgaagaaga
     2821 gcagctgtac agctactacg ggcagcgcta cggcgagccg ggaagcccgg gcggcctggc
     2881 cgggaccagc ggccaggcca tgacggatgc ctatggcgcg ccgggcgcgc agggctatga
     2941 cacctctggg ccgaccaccg atgaggcaat gacccgctcc gaggagcgga tgcacgtagg
     3001 caccgcgacc caggaggccg gccgggcccg gctgcgcaag tacgtcgtca ccgagacggt
     3061 ccagcagtca gtgccggtca gccacgaaga ggtccgcctc gagcgtgagc cgatcaccga
     3121 ggccaacatc ggtcaggcaa tggacgggcc ggagatctcc gaagaagaac acgaggtcac
     3181 cctccacgcc gaacagccgg tcgtggccaa agaggcggtg ccggtcgagc gggtccgcct
     3241 ggccaaggag caagtcaccg gcgaggagac cgtctccggt gaggtccgca aggagcagat
     3301 cgaaaccgac accgacggcg acaccggcac gctcaggtaa ccccggcaca ccggcacgga
     3361 aggcctgctc ctcgtcgggg caggccttcc tgggcctgcg gcggcacttg gccgtgggct
     3421 tgtccgaagc cactgttcac agcgtcctga gcccaaggaa gctctccgac cgtataaagc
     3481 ctcttcgtcc cgaactagcg gcgccgctgg gcgtttcgcg gttgccccag ctagcttcgt
     3541 gtgctggtga tcgtgctggc tcgcggctgt acgggcatct tgctgtactt cggcgctgta
     3601 cctctatcga ctgcggttgg tgcgctgacc gcttccttat cagggattat cggctcggtc
     3661 cgtcatctgc tcgatcgtag gtccggcccc gatcacgtcg acccacatga tctctctccg
     3721 gtcaactgcg ttgttggcat gatcgcagcc tagaatgctg cgactggatc ctgcagacca
     3781 gcgctcatgc aggtcgcagg cgcggcgcgg accgcgtcag tgaccgtgag cactcgtctc
     3841 ttacc
//
LOCUS       DASRPQ010002493         1258 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1246276, whole genome shotgun sequence.
ACCESSION   DASRPQ010002493 DASRPQ010000000
VERSION     DASRPQ010002493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1258
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1246276"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..>1258)
                     /locus_tag="VFD73_27980"
     CDS             complement(149..>1258)
                     /locus_tag="VFD73_27980"
                     /inference="COORDINATES: protein motif:HMM:NF012486.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosinase family protein"
                     /protein_id="HZI77811.1"
                     /translation="QVEFFASATSTGQDELELSLPVTGEPVDLLIAGLFGRPSSADKD
                     AAVEIAEASTGDVLGVTPLMVRIRKNATALTAAERDRFLAALAAFNDRGMGRYSDFRN
                     VHTEAGSPEAHFNPGFLPWHRTFLLDLERELQAIDPSVSLPYWRFDQPAPSLFSADFM
                     GVPDPVGTLRFSAVNPLQFWATDGIPGIVRPPRFNTQTQHASVISEAATLLLGGQDAL
                     YEVFRGLENNPHGSAHTSFGGPISQIPTAVKDPLFFLLHANVDRLWAKWQWHFHRFDV
                     MSTKTFSAQGKAGDPGAARVGHNLDDTMWPWNQVTTPPRPATAPGGTLAPSPLTAAPG
                     LSPTVGELIDYQGVLTPPTRLGFDYDDVPFEFPFA"
BASE COUNT          223 a          391 c          422 g          222 t
ORIGIN      
        1 cgcgacagcc gcacgcgatt ccgtgccctg cctggatctc gccacctggt cgcggaaggt
       61 gggctgccgg gcggcctgct cgagctcttc ctcgaactgc ctgcggtatt ccgagatatc
      121 cattcagcat cacctcacgt ctgaagtatc acgcgaaggg aaattcgaac ggcacgtcgt
      181 cataatcgaa tcctaggcgg gtcggcggtg tcaggactcc ctggtaatcg atgagctcgc
      241 cgaccgtggg actcagcccg ggcgcggcgg tgagcggcga tggcgccagg gtgcccccag
      301 gggctgtggc cgggcgaggc ggcgtcgtga cctggttcca gggccacatc gtgtcgtcca
      361 ggttatgtcc cactctggcc gcgcctggat ctccggcctt gccttgagca gaaaaagtct
      421 tggtgctcat cacgtcgaaa cgatggaagt gccactgcca tttcgcccac agccggtcca
      481 cattggcgtg cagcaggaag aacagcggat cctttaccgc ggtaggaatc tgggagatcg
      541 gacctccgaa actggtatgc gcactgccgt gcgggttgtt ctccaatccc cggaatacct
      601 cgtacagagc gtcctggccg ccaagcagca atgtagcagc ttcggagatt acgctggcgt
      661 gctgcgtctg ggtgttgaag cggggcggcc tgacaatacc cggaatgccg tccgtcgccc
      721 agaactgaag cgggttgacg gcgctgaacc gaagggttcc gaccggatca ggaaccccca
      781 tgaagtccgc gctgaacagg ctgggcgcgg gctggtcgaa gcgccagtag ggcaaggaga
      841 cgctcgggtc gatcgcctgg agctctcgtt ccaggtccag caggaaggta cggtgccacg
      901 gcaggaaacc gggattgaag tgagcctcgg gacttccagc ctcggtgtgc acgttccgga
      961 agtcgctgta ccttcccatg ccgcgatcgt tgaacgcggc cagggcggcc aggaaccggt
     1021 cgcgctcggc ggccgtcagg gccgtcgcgt tcttccggat gcgcaccatc aggggagtga
     1081 cgccgagcac gtcgccggtg ctcgcctcgg caatctcgac ggcggcatcc ttatccgcac
     1141 tgcttggccg cccgaacagg cccgcgatga ggaggtcgac cggctcgccg gtgaccggca
     1201 gggagagttc aagctcatcc tgcccggtgc tggtcgcgga agcgaagaac tcgacctg
//
LOCUS       DASRPQ010002494         2788 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4073400, whole genome shotgun sequence.
ACCESSION   DASRPQ010002494 DASRPQ010000000
VERSION     DASRPQ010002494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2788
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4073400"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1078)
                     /locus_tag="VFD73_27985"
     CDS             complement(<1..1078)
                     /locus_tag="VFD73_27985"
                     /inference="COORDINATES: protein motif:HMM:NF022481.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2723 domain-containing protein"
                     /protein_id="HZI77812.1"
                     /translation="MTTDQQRPPYGWAALAALVVFLIYLATLAPTTAFWDTSEYIAAA
                     KVLGIPHPPGNPLFVILAHTFGLLPLAASYAVRINLFAAVTSAASAGLWFLVAERWLR
                     TIVPQRTARYAAAFGGVLVGATSWSVWNQSTVNEKVYTVSLLSIALVMWLVVRWGDDE
                     PGTHRDRWLVLIAYVLALTSTNHLMGVLALPALAVYVLWTDWRTVLRPWALLTFYALL
                     LAVSGQWIAMLNGGGLGTLLILVTLALLGYALWKTPRDPLVYLGIAAVVVGISLNYLW
                     LPLRAAQHPAINEGEPVGFLSQALQDVLNRVQYGKPPLSERQATFGAQLANFWQYFSW
                     QFARDWGAVGAVATGVFTVLGLTGL"
     gene            complement(1121..2650)
                     /gene="purH"
                     /locus_tag="VFD73_27990"
     CDS             complement(1121..2650)
                     /gene="purH"
                     /locus_tag="VFD73_27990"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HZI77813.1"
                     /translation="MSRALISVSDKRGVVAFARGLVELKWEIVSTGGTAAALREGGVP
                     VIEVEQLTGFPELLDGRVKTLHPAVHAALLARRDLPAHLSALEKHRITPIDLVAVNLY
                     PFQLTISRQDSTYEDAIENIDVGGPSMLRSAAKNHDSVLPVVDPTDYPTVLELLRKGA
                     IDQETRREFAAKVFSHTSDYDAAIAAYLTPSGEGLPPRIGIAMEKMQSLRYGENPEQR
                     AALYVTEEPRGMRDLTQRQGKELSFNNLLDIDAAMATVAAWSSRPACAIIKHTTPCGL
                     AIASTAVEAFRKARATDPVSAFGSVIGFNTVVDRATAVAMGDLFVEVVVAPSFHADAL
                     EAFGTKKQLRVVELPVSDGAPALDFKRVRGGFLVQDQFRFNPSEQGWHVATERQPSES
                     EWNDLRFGWAAVAAVKSNAIVLARQETVIGIGAGQMSRVDSVFLAVHKARQQGHDPGG
                     SALASDAFFPFADNIELAASAGITAIIQPGGSIRDSEVIAAANRHNIAMVMTGRRQFR
                     H"
BASE COUNT          552 a          902 c          885 g          449 t
ORIGIN      
        1 agagtccggt caggccgagc accgtgaaca caccagtcgc aaccgcgccg accgctcccc
       61 agtcacgggc gaactgccag gagaagtact gccagaaatt cgccagctgt gcgccgaacg
      121 tcgcctggcg ttccgacagc gggggctttc catattgcac ccgattgaga acatcctgca
      181 gcgcctggct caggaacccc accggttcac cctcgttgat cgccggatgc tgggctgctc
      241 ggagcggaag ccagagatag ttgagagaga tcccgaccac taccgcagcg attccgaggt
      301 agaccaacgg atcccgcggc gtcttccaga gcgcatatcc caggagcgcc agagtcacca
      361 ggattaacag cgtgcccagg ccacccccgt tgagcatggc gatccattgg ccgctcaccg
      421 cgagtaacaa cgcgtagaag gtgagaagcg cccagggacg cagcaccgtt cgccagtcgg
      481 tccagagcac ataaaccgcg agcgcgggca gggccagcac gcccatcaga tgattggtcg
      541 aggtgagtgc cagaacgtag gcgatgagca ccagccagcg gtcgcgatgg gtgcccggct
      601 cgtcatctcc ccagcgcacc accagccaca tcaccagcgc gatcgacaag agcgagacgg
      661 tatacacctt ctcgttcacc gtagactggt tccacaccga ccaggaagtc gccccgacca
      721 ggacgccacc gaacgccgcc gcgtacctgg ccgtccgctg ggggacgatc gtccgcagcc
      781 agcgctccgc caccagaaac cacaagccgg cggaagccgc gctggtgacc gcagcgaaga
      841 gattgatccg aacggcgtac gaggcggcaa gcggcagcag gccgaaggta tgcgccagaa
      901 tgacgaagag cggattgcct ggcgggtgcg ggatacccaa caccttggcc gcggcgatgt
      961 actccgacgt atcccagaag gccgtggtgg gtgccagggt ggcgagataa atcaggaaca
     1021 caacgagcgc cgccagcgcc gcccagccgt agggtggtct ttgctgatcc gtggtcatag
     1081 tcctcgtgat ggtcaggggt ggccgctgac ctcttaccgt ctagtgccgg aactgccgtc
     1141 tgccggtcat caccatggca atgttgtgcc gattagccgc ggcgatcact tctgaatcac
     1201 ggatcgagcc gcccggctga atgatcgcgg tgatgccggc gctcgcagcg agctcgatgt
     1261 tatcggcaaa ggggaagaac gcgtcggagg ccaaagcgct cccgccggga tcgtgaccct
     1321 gttgccgagc tttgtgcacc gcgagaaaga cactgtcgac ccggctcatc tgcccggcac
     1381 cgatcccgat caccgtctcc tgccgcgcga gcacgatcgc gttcgacttg accgccgcga
     1441 cggcggccca gccaaaccgc agatcgttcc attcagattc cgagggctgc cgttcggtcg
     1501 caacgtgcca gccttgctcc gatgggttga atcggaactg atcctgcacc aggaatccac
     1561 cccgtacgcg cttgaaatcg agggcgggag caccatcgct gactggaagc tcgaccaccc
     1621 ggagctgctt cttggtcccg aaagcctcca gggcatcggc gtggaacgat ggtgcgacga
     1681 ccacctcgac aaagaggtca cccatcgcca ccgcagttgc ccgatccacc acggtgttga
     1741 agccgatgac cgacccgaat gccgagaccg ggtcggtggc gcgggccttc cggaacgcct
     1801 cgaccgcggt gctggcaatg gccaagccgc agggggtcgt atgcttgatg atggcgcagg
     1861 cgggccgcga gctccacgcc gccaccgtgg ccatcgcagc gtcgatgtcg agcaggttat
     1921 tgaaggaaag ctccttgccc tgacgctggg tcaggtcccg cattccgcgc ggctcttcgg
     1981 tgacgtagag cgcggctcgt tgttccggat tttcgccgta ccggagcgac tgcatcttct
     2041 ccatcgcgat accgatccgg ggcggcagcc cctctccgct gggcgtcagg tacgcggcga
     2101 tcgcggcgtc gtaatccgag gtgtgggaga agaccttggc cgcgaactct cggcgggttt
     2161 cctgatcgat ggcgcccttc ctgagcaact caagaacggt gggatagtcg gtcggatcga
     2221 ccaccggcag taccgagtcg tggttcttgg ccgccgagcg gagcatcgac ggacctccga
     2281 cgtcaatgtt ctcgatcgcg tcctcgtagg tcgaatcctg acgcgagatc gtcagctgga
     2341 agggatagag attcaccgcc accagatcga tcggtgtaat gcggtgtttc tcgagagcgg
     2401 agagatgagc cggcaagtcg cgccgggcga gaagagcggc atgaacggcg ggatggagcg
     2461 tcttcacccg cccatcgagc aattcaggaa agccggtaag ctgttcgacc tcgatcaccg
     2521 ggaccccgcc ctctcgaaga gcggcagcgg tgcccccggt ggacacgatc tcccatttga
     2581 gctcaaccag cccacgggca aaagccacca ctccccgttt gtcgctgacc gatatcaatg
     2641 cgcgggacat ttagtgagcc cggccctgat gggccgggtg gtcgcgagtc gcgagtcgcg
     2701 agtcgaggac aacggggcgg cctgcccgag ccgctgcaag cactacggcc ggcagaagct
     2761 ggtgctcaac ctcgagaact ctttgcgc
//
LOCUS       DASRPQ010002495         1089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1247018, whole genome shotgun sequence.
ACCESSION   DASRPQ010002495 DASRPQ010000000
VERSION     DASRPQ010002495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1247018"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(169..>1089)
                     /locus_tag="VFD73_27995"
     CDS             complement(169..>1089)
                     /locus_tag="VFD73_27995"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77814.1"
                     /translation="ALSLAGGPEVAFLAAHSAGKLKVIDATIDFSRTYTLLGGILGGA
                     LLSAASHGTDHLIVQRLLATRSLRDARIALVGSGVMVILQFSLFLLVGVALWAAALAP
                     EGTPSDQLFPSFVVHHLPTGLAGLVVAGILAAAMGTHSSAINALASSATHDLYASWTH
                     RRDPVHLLRVGRILSALWATGLIAGALGFHYAATGSDTPVVVLALSIASMTYGPLLGT
                     YFLAGRSSRTRGRDVVGAVVVTVLIMLVVVFAKTLVADGLQWLAPVSRLAWPWYVPLG
                     TLICIGVGIALSYLPEAIVVSADPAAKKSL"
BASE COUNT          235 a          345 c          351 g          158 t
ORIGIN      
        1 cggcgaatca cctctacgat cgtgctggcg gaagcgagcg ctcgcccggg acgtacggcg
       61 gcgccggggc cctctgctcg accgacaatg gtgccgtcga ccgacactgc taccgcagtc
      121 ttggtcccgc cgacatcggc accgatcagt gttctcggca tgtcaatctc agagtgactt
      181 tttggccgct ggatcggcgg agactactat cgcctcagga aggtaactca gcgcaatccc
      241 gacaccgatg cagatgagag tgcccaatgg gacataccac ggccatgcga gacggctgac
      301 cggcgccagc cattggagac cgtccgctac cagcgttttg gcgaacacca ccaccagcat
      361 gatcaagacc gtaacaacaa cggctccaac cacgtcacgg ccacgagtcc gagacgagcg
      421 accggcgaga aaataggtcc cgaggagtgg gccgtacgtc attgatgcga tggatagtgc
      481 cagcaccaca acgggagtgt cactcccggt cgccgcgtag tggaagccca gagctcccgc
      541 gatcaggcca gttgcccaga gggcagagag gatgcgccca acgcgcagga gatgaaccgg
      601 gtcacggcgg tgggtccacg aggcatacag gtcgtgggta gcagatgacg cgagggcgtt
      661 gattgctgag ctatgggtcc ccatcgctgc cgccaggatg ccggctacga ctagaccagc
      721 gagcccggtc ggaagatggt gtaccacaaa ggaaggaaac agctggtcgc tcggggtgcc
      781 ctcaggcgcg agggccgcgg cccacaacgc cacgccaacc agcaggaaga ggctgaactg
      841 caggatcacc atcactcccg atccgaccag cgcgatgcgc gcatcgcgca gcgatcgagt
      901 ggccagcagg cgctgcacga tgaggtgatc ggttccgtgc gaagcggcag acaggagtgc
      961 tcccccgagg attccaccca gcagcgtgta cgtccggctg aagtcgatcg tcgcatcgat
     1021 caccttgagc ttgccggcgc tgtgggctgc caggaacgcc acctcaggtc cgccggccag
     1081 agacagagc
//
LOCUS       DASRPQ010002496         1025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2498479, whole genome shotgun sequence.
ACCESSION   DASRPQ010002496 DASRPQ010000000
VERSION     DASRPQ010002496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2498479"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..329
                     /locus_tag="VFD73_28000"
     CDS             <1..329
                     /locus_tag="VFD73_28000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77815.1"
                     /translation="PAGLLRAGRGYRWTVRTLDRPGAVARGDAELIVLDEDAARRCEV
                     VHDILEPEKPDSLPLLAEIDRSLGLLLEAREELQAALDSEPEDRALRAALAEIATQLE
                     NDDDPR"
     gene            complement(376..666)
                     /locus_tag="VFD73_28005"
     CDS             complement(376..666)
                     /locus_tag="VFD73_28005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77816.1"
                     /translation="METLRSAGSFEDNPAAVHNLDLEIQPIERSSKISSCDAIPLSAK
                     GSAPGKKPIAWHQPDTKAWGFRSDILYDHSWCGERATRILDIVERRGEGPWG"
BASE COUNT          171 a          297 c          343 g          214 t
ORIGIN      
        1 tacccgccgg attgctccgc gccggccgag gctatcgatg gacggtccgc acgctggacc
       61 gtccaggtgc ggtcgctcgc ggtgacgctg agctcatcgt cttggacgag gatgccgccc
      121 ggaggtgcga ggtagttcac gatattctcg agcctgagaa gcctgactct cttccattgt
      181 tggctgagat cgaccgcagc ttggggctgt tgctcgaggc tcgcgaggag ctgcaggcag
      241 ccctcgacag tgagcccgag gatcgtgcgc tccgggcagc gcttgccgag atcgcaacgc
      301 aattggagaa cgacgatgat ccccggtagg agcttcctgc tttccgctgt ggctttgagt
      361 gtcatggcct tctcgtcatc cccaagggcc ctcgccgcga cgctccacga tatcgaggat
      421 tcgggttgcc cgttctccac accaggagtg atcgtagaga atgtcgctcc ggaatcccca
      481 ggctttcgtg tcgggttgat gccaggcgat cggctttttt cctggtgcag aacccttggc
      541 agacaggggg attgcgtcgc acgaggagat cttcgaactc cgttcgattg gctggatttc
      601 cagatcgaga ttgtgcaccg cggcggggtt gtcctcgaag gagcccgcgg aacggagagt
      661 ctccactggg acctgttgcc atcgacccag ggcctgacgg tggcaccgct cctgcgaggc
      721 gcgcttgcca aggcttacca ggcttcactt gattacgcgc gggctggtgc tcccgtgtcc
      781 gccgggcagg agcttgagcg agcagcagaa ctggcctctg gaaatcattg taccgcggag
      841 gagctctggt tgcgcagact ggctgccacg tttcgtaccc aggcccgtca atggcccgaa
      901 gtggatgcag ggtatgaggc tgcgctggcg agagctcgag cgcggaaggc tatccgcatg
      961 gaagagcatc ttcttatgga ctggtggtgg tcgctcttgg agcgtggtga gctcgcacag
     1021 gccaa
//
LOCUS       DASRPQ010002497         1086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4378428, whole genome shotgun sequence.
ACCESSION   DASRPQ010002497 DASRPQ010000000
VERSION     DASRPQ010002497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4378428"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..394
                     /locus_tag="VFD73_28010"
     CDS             <1..394
                     /locus_tag="VFD73_28010"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI77817.1"
                     /translation="ELARQGRYKEARQEFRRAVEIDPENAMAWANLGMASAASGSEQE
                     AVESYSKALRLDPGNWLAHYNLGLLQARRGNPEEALRHLEQAFAAQPDPASPERLAMI
                     ADLRSSAPAGLRKEPRFAALVGKSGGRE"
     gene            391..>1086
                     /locus_tag="VFD73_28015"
     CDS             391..>1086
                     /locus_tag="VFD73_28015"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HZI77818.1"
                     /translation="MRRALLFLTVLAFLWTRPVQAGGEACAQARDIIAEVARQYSGSP
                     DHAALLMKLKTARNLCPTLGDSWKYSYCSATALKQDKDARIFRDRAVFAGISDLSCPT
                     GEGGATVAPNAPLPGFVRAKYALIVGVGKFKDPAIPQLQYAAKDAQDLAAVLVDPRYG
                     RFELANVTLLTDEKATRANILNALQEIFNKTEEEDLVFLYVSSHGSPWQSAKGLGGVG
                     YIVTYDTSVKNIWL"
BASE COUNT          198 a          362 c          348 g          178 t
ORIGIN      
        1 tgagctggcg cgccagggcc gctataaaga ggcgcgccag gagttccgcc gcgccgtgga
       61 gatcgatccg gaaaacgcca tggcctgggc caatctcggc atggccagcg ccgcgtcggg
      121 gagcgagcag gaggcggtcg agagctactc caaggcgctg cggctcgatc ccggaaactg
      181 gctcgcccat tacaacctcg gcctcctgca ggcccgccgt ggcaatccgg aggaggctct
      241 gcggcacctg gaacaggcct tcgcggctca gcccgatccg gcgagcccgg agcgcctggc
      301 catgatcgca gacctgcgga gctcggcccc cgccggcctg cggaaggagc cgcgttttgc
      361 ggcgctcgtt ggcaaatcgg gagggcgtga atgagaagag ctctgctgtt ccttacggtc
      421 cttgcctttc tctggacccg gcctgtccag gcaggcggag aggcgtgtgc gcaggcccgc
      481 gacatcatcg ccgaggtagc gcggcagtac agcggttcgc ccgatcatgc ggcgcttctg
      541 atgaagctca agacagctcg caatctctgt cccaccctcg gggactcctg gaagtattcg
      601 tactgcagcg cgacggccct gaaacaggac aaggacgccc gcatcttccg cgaccgggcg
      661 gtcttcgccg ggatatctga tctctcctgc cccaccgggg aaggcggggc cacagtcgct
      721 ccgaatgccc ccctgcccgg cttcgttcgc gccaagtatg ccctgatcgt cggggttggg
      781 aagttcaagg accccgcgat cccgcagctt cagtacgctg ccaaagacgc tcaggacctc
      841 gctgcggtcc tcgtggatcc ccgctacggc cggttcgagc tggccaacgt gacactgctc
      901 accgacgaaa aggcgacccg ggcgaacatc ctcaatgccc tgcaggaaat tttcaacaaa
      961 acggaggagg aagacctggt cttcctctac gtcagcagcc acggctcgcc ctggcagagc
     1021 gcaaagggcc tgggcggagt gggctacatt gtcacctatg acacctcggt gaaaaacatc
     1081 tggctc
//
LOCUS       DASRPQ010002498         2302 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2498731, whole genome shotgun sequence.
ACCESSION   DASRPQ010002498 DASRPQ010000000
VERSION     DASRPQ010002498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2302
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2498731"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1128
                     /locus_tag="VFD73_28020"
     CDS             <1..1128
                     /locus_tag="VFD73_28020"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI77819.1"
                     /translation="AHEANNQMTVVLGATSFLLGRDDLPETAIQDLEYIREAAERTAA
                     ITAQLLAFSRRQVIQVRVVDLDETVQGLEGVLRRALGERSTLVLQLRGNARVKADSGQ
                     LTQVLLNLVLNARDAMPLGGRLTIETRVAELTESFARAHPGIPIKPGEYAVLAVSDTG
                     HGMGPETLSHLFEPFYTTKPIGKGTGLGLATVYGIVKQSNGYVWAYSEVGHGSTFKVY
                     LPLAHETPGINTAGPLPVYAAGETVLLVEDEPAVRLMTSRALQEFGYGVIEASGGHQA
                     LGILEREGGRVDILITDVILPGMDGPELARRSAELRPELPVLFISGYTDAEMVRRGLL
                     ETGQPFLQKPFTPEAISREIARLLRKGELTTGEHAGASQPS"
     gene            complement(1132..>2302)
                     /locus_tag="VFD73_28025"
     CDS             complement(1132..>2302)
                     /locus_tag="VFD73_28025"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZI77820.1"
                     /translation="QRKRLEDQFRQAHKMEAVGRLAGGVAHDFNNVLTIIRAQTEFLL
                     ADLTADDPRRADVLEIQDAADRAATFTRQLLAFSRRQLLQPEVLDLNAVITGMEMMVR
                     RLVGEDVVLLTKLDRDLPRVWADPGQLQQVLMNLAVNSRDAMPHGGTLLVETGVVDLD
                     EQYPRQHPGAKAGRHVVLVVTDTGCGMDQATRSRIFEPFFTTKEAGKGTGLGLSTVYG
                     IVKQSGGHIWVYSEVGRGTTFKLYFPPHYGAVKAREPDPVAAPVVGTGATILLVEDEL
                     PVRNAVRRLLERHGYQVLEAANGHDALSLIAASSAEIRLVVSDMVMPGMGGMELANRL
                     RTISPKVPVLLMTGYTEEAIARTGERRYDDLIIEKPFSQHTILEKVRGALAAAQP"
BASE COUNT          415 a          726 c          754 g          407 t
ORIGIN      
        1 gcccatgagg ccaacaacca gatgacggta gtgctgggcg ccaccagttt tctgctcgga
       61 cgcgacgatt tgccggagac ggcgattcag gatctggagt atatcaggga ggcggccgaa
      121 cgcactgctg ctatcaccgc acaattactt gcgttcagcc gccggcaggt gatccaggtc
      181 agagtcgtgg acctggatga gacggtacag ggattggaag gcgtgctgcg gcgggcgctc
      241 ggggagcggt cgacgctggt gctgcagttg cgcggcaacg cgcgagtgaa ggccgattcc
      301 ggccagctga cgcaagtgct gctcaacctg gtactgaacg cgcgggatgc catgccgctc
      361 ggcggccggc tcacgatcga gacccgagta gccgaactga ccgaaagctt tgcccgagct
      421 cacccgggaa ttccaatcaa accgggcgag tacgctgtcc tcgcggtcag cgataccggc
      481 cacggcatgg gaccggagac gctgagccac ctcttcgagc cgttctatac caccaagccg
      541 atcgggaaag gcactgggct cggccttgcc acggtgtatg gcatcgtaaa gcagagtaac
      601 ggatacgtct gggcctacag cgaggtgggc cacggatcga cgttcaaggt gtatctgccg
      661 ctcgcccatg aaacgcctgg gatcaacacc gccggtccgc tgccggtata tgcggcgggc
      721 gagaccgtgc tcctcgtgga ggatgagccc gcggtgcggc taatgacctc acgggcgctt
      781 caagagttcg gatatggtgt catcgaggca agcggtggac accaggccct tggcatactg
      841 gagcgagagg gtggccgcgt cgatatcctg attactgatg tgatcctgcc aggcatggac
      901 ggcccggagt tggcccgccg ctctgccgag ctccgcccgg agttgccggt cctgttcatc
      961 agtggctata ccgatgctga gatggtgcga cgcggtctgc tcgagacagg tcagccgttc
     1021 ctgcaaaagc cgttcacccc ggaggcgata agcagggaaa tcgctcggct gctgcggaag
     1081 ggcgagctta ccaccgggga gcacgcggga gcttcccagc ccagctagac gtcacggttg
     1141 ggccgcagcc agggctcccc ggaccttctc caggatggtg tgctggctga acggcttctc
     1201 gatgatcagg tcatcatagc gtcgttcgcc ggtccgggcg atcgcctcct cggtatagcc
     1261 ggtcatcagc aaaaccggaa ccttcggcga gatggttcgg agccgatttg ccagctccat
     1321 cccacccatg cccggcatca ccatgtcgga caccacgagc cgaatctcgg cgctgcttgc
     1381 cgcgatgagc gagagggcgt cgtggccatt cgcagcctcg agcacctggt atccgtggcg
     1441 ctcgagcagc cggcgaacgg cgttccggac cggcagctcg tcttcgacca ggaggatcgt
     1501 cgctccggtc ccgaccacgg gtgcagccac cgggtccggc tcgcgggcct tcacggcacc
     1561 gtagtgcgga gggaagtaga gcttgaacgt ggtgccccgc cccacctcgc tgtagaccca
     1621 gatgtgcccg ccgctctgtt tcacgattcc atacaccgtt gagagcccga gaccggtacc
     1681 cttccccgct tccttggtcg taaaaaacgg ctcgaagatg cgcgagcggg tggcctggtc
     1741 catgccgcag ccggtgtcgg tcaccaccag gacgacatgc ctgccggcct tggcgccggg
     1801 atgttgtctc ggatattgct cgtccaggtc gacgaccccg gtctctacca gcaacgtgcc
     1861 accgtgtggc atggcgtctc tcgagttcac ggcaaggttc atgagcacct gctgcaactg
     1921 gccgggatcg gcccacaccc gcggcagatc gcgatcgagc ttggtcagca gcacgacgtc
     1981 ctcacccacc agccggcgca ccatcatctc catcccggtg atcacggcgt tcaggtcgag
     2041 gacctccggc tggagcagct gacgccggct gaatgccaga agctggcggg taaatgtcgc
     2101 ggcccgatcg gcggcatcct gaatctcgag cacgtcggcc cggcggggat cgtcggcggt
     2161 cagatcggcc agcagaaact cggtctgggc acgaatgatg gtgagcacgt tgttgaagtc
     2221 atgagcaacc ccgccggcca ggcggccgac ggcttccatc ttgtgtgcct ggcggaactg
     2281 gtcctccaga cgtttgcgct gg
//
LOCUS       DASRPQ010002499         1025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_939100, whole genome shotgun sequence.
ACCESSION   DASRPQ010002499 DASRPQ010000000
VERSION     DASRPQ010002499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_939100"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1014)
                     /locus_tag="VFD73_28030"
     CDS             complement(<1..1014)
                     /locus_tag="VFD73_28030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZI77821.1"
                     /translation="MREADDQGIAPAQRVALRLELADLQRKLAAPPGVADGTAQFDLA
                     KLREAENTLREAIIVCTQASDTKLYLRSLDALAEIFCVVEDYRALEEVARDAIRLGAS
                     VTNEEPRHMEERLQRLAMAQDKNGHFPDAMKTFDQAIALREKRYGAGHLETGNLLAEV
                     GRICRVRGVHTQAQMYLRRALRIHETQNGTDSPEALGDIQQLAGSLEDTGDLDGAAGQ
                     YERALGLKLRKLGCENIDEVAEMQYSLACLHIGWGHYSRARELLSECVGSFQRLAGPR
                     LAVAYESLAYVEEREGRTSFALDVLEKATKVWEKCHPPRLEDLARNLELRADLSDHLR
                     LRVE"
BASE COUNT          174 a          359 c          283 g          209 t
ORIGIN      
        1 ctccacgcgc aggcgcaggt gatccgataa atccgctctc agctccaggt tccgagccaa
       61 atcctcgagc cgcggcggat ggcacttctc ccaaaccttc gtcgctttct ccagtacgtc
      121 cagcgcgaat gaggtccgcc cctcgcgctc ctcgacatac gccagcgatt cgtaggccac
      181 cgccagccgg ggaccagcca gccgttggaa ggacccgacg cattccgaca gaagttcccg
      241 ggcccgcgaa tagtgtcccc agccgatatg caggcaggcc aggctgtatt gcatttcggc
      301 gacctcgtcg atgttctcgc accccagttt tcggagcttc agtcccaaag cccgctcata
      361 ctgcccggcg gctccatcca gatcgccagt atcctccagc gatccggcca gttgctggat
      421 atcgcccaat gcctcggggg aatccgtccc gttctgtgtc tcatggatac ggagagcccg
      481 tctcaaatac atctgggctt gggtatggac cccccgtacc ctgcagatcc ggccgacttc
      541 cgccagcagg ttgcccgttt ccaagtgccc tgccccatag cgcttctccc gcaacgcgat
      601 agcctgatcg aaggtcttca tggcatcggg gaaatggccg tttttgtcct gggccatggc
      661 cagccgctgc agccgctctt ccatgtgtcg cggttcctcg ttcgtaaccg aagcccccag
      721 ccggatcgca tcccgggcca cttcttccag tgcccggtaa tcttccacga cgcaaaagat
      781 ttccgccaga gcgtccaggg agcgcaggta cagcttggta tcggaggcct gggtacacac
      841 gatgattgcc tcgcgcaggg tgttctcggc ctcccgcagt ttggccaaat cgaattgagc
      901 ggttccgtcc gccactcccg gcggtgcggc taatttgcgc tgcaggtcgg ccagttccag
      961 ccgcaatgcg accctctggg cgggtgcgat tccctggtcg tccgcttcgc gcacggcaat
     1021 cgcca
//
LOCUS       DASRPQ010002500         1133 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3129081, whole genome shotgun sequence.
ACCESSION   DASRPQ010002500 DASRPQ010000000
VERSION     DASRPQ010002500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3129081"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..306)
                     /locus_tag="VFD73_28035"
     CDS             complement(<1..306)
                     /locus_tag="VFD73_28035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77822.1"
                     /translation="MNPLHAIPMPVPVPVPDSAAALHAARALRRQRHLLSALQALHEQ
                     LGDVFRLPLPGFSSVVLVGPDANRFLLLEARGSVRWRAETDPVTRLLEHGILVTDGAV
                     "
     gene            657..782
                     /locus_tag="VFD73_28040"
                     /pseudo
     CDS             657..782
                     /locus_tag="VFD73_28040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973759.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
     gene            865..>1133
                     /locus_tag="VFD73_28045"
     CDS             865..>1133
                     /locus_tag="VFD73_28045"
                     /inference="COORDINATES: protein motif:HMM:NF013068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI77823.1"
                     /translation="MTPYQVTLDPQTLQRLFSGDSQLGQLLEAVLNQVLEAQVREQLQ
                     AAPYERTEQRQGYRNGYQPRRLTTRVGRLVLRVPQVCEGLFSTEL"
BASE COUNT          183 a          355 c          393 g          202 t
ORIGIN      
        1 aactgcgcca tcggtgacga ggatgccatg ctcaagcagc cgggtcacgg gatcggtctc
       61 ggcgcgccag cgcacacttc ctcgtgcctc aagcagcaga aatcggttgg cgtccggccc
      121 caccagcacc acgcttgaga atccagggag cgggaggcga aagacatcgc cgagctgctc
      181 gtgcaacgct tgcaaggcgc tgaggagatg acgttgtcgc cgcagcgccc gcgcggcatg
      241 gagcgcggcg gccgagtcag gcaccggcac aggcacgggc atcggtatgg cgtgcagagg
      301 gttcatggat cctccaagag tgacatctcg tggtggctcc cgctggagag caccaacgcc
      361 cgctcggggt taccgcgtgc atctccgttc gcggttcaac tcgcgttggc gcgtcgcgtt
      421 ggcgcgccta gcatgtatgt gtccagggag ggggtcttcc gcgcttttgg tgaatcaagt
      481 aggtggtgtt ggtgtggcgg gtgatagagt ggcgtccacc gtgtctgcga tggagggacg
      541 ccatggccgc accagtgacg acgatcttgc ccgatcccac ccagctccac ctgctccacc
      601 tgctccacct cagcgcaacg gcgacggaga ttacggcggc ggttcagacc gccgcctcga
      661 gcgcgccttg cccgctgtgc gggcgattct cccgtcgggt gcattcccgc tacgtccgct
      721 ccgtggcgga cgtcccctgg cacggggtgc cgttccgcct ccgtctgcag gtgcggcgct
      781 tcggaagggg tgctgagagg gagggcaggg cctctctggt aggctggttg tgattcaagc
      841 atccagcaac agagaggatc tcccatgacc ccgtaccagg ttacccttga tccgcagacg
      901 ttgcaacggc tcttcagcgg tgacagtcag ttgggccagc tcttggaggc ggtgttgaac
      961 caggtcctcg aggcgcaggt gcgtgagcag ctgcaggcag cgccctacga gcgcacggag
     1021 cagcgccaag gctaccgcaa cggctatcag ccgcggcggc tgacgacccg cgtcggccga
     1081 ctggtgctgc gggtgccgca ggtgtgcgag gggctctttt caaccgagct gtt
//
LOCUS       DASRPQ010002501         1272 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2499228, whole genome shotgun sequence.
ACCESSION   DASRPQ010002501 DASRPQ010000000
VERSION     DASRPQ010002501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1272
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2499228"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..736
                     /locus_tag="VFD73_28050"
     CDS             <1..736
                     /locus_tag="VFD73_28050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77824.1"
                     /translation="FVHHLKYWGPIQAPPEPKTGNKIYFTSAPAAIFLGLDGYPGPLP
                     QSCLQYMVATLPAAKISVVTMHKVPEYFNNDLVTPTSVMKDYQIRYESLGVNYYTVNT
                     RLYNSGWTNTDDAVYTSKGEWVTVYLPGDPRLPAAEIAQVRSLARAANFNVIQMPPPP
                     TGPIATRIPYPSIALRQKAISSSFPYSNLALPCWSQNHNYKIWTNQSSPAFFAKYASS
                     PRNNGPYYVDGVKLTFAQFISKYSKQ"
BASE COUNT          271 a          436 c          357 g          208 t
ORIGIN      
        1 gttcgtccac catctaaagt actggggccc catccaggct ccgccggagc ccaagaccgg
       61 caacaagatc tacttcacgt cagcgccggc cgccatcttc ctcgggcttg acggctaccc
      121 cggccctctc ccgcaaagct gcctccagta tatggtggcc actttgcctg cggcgaagat
      181 ctcggtggtg acgatgcaca aggtgccgga gtacttcaac aatgacctgg tcacaccgac
      241 ctcggtcatg aaagattacc agatacggta tgagtccctc ggggtgaact actacaccgt
      301 caataccagg ctgtacaact cgggctggac caatacagac gacgcggtct acacctccaa
      361 gggcgagtgg gtgacggttt acctgccggg tgacccgcgg ctgccggccg cggagatcgc
      421 gcaggtgcgc tccctggcgc gggcggcgaa tttcaacgtc atccagatgc cgccgccacc
      481 gaccgggcct atagcaacga ggattcccta cccgagcatc gccctccgcc agaaggcgat
      541 cagctcgtcc ttcccctact ccaacctggc cctgccgtgc tggtcgcaga accacaacta
      601 caagatctgg accaaccaga gcagcccggc gttcttcgcc aagtacgcct ccagccccag
      661 gaacaacggg ccgtactacg tcgacggcgt gaagctgacc ttcgcgcagt tcatcagcaa
      721 gtactcgaag cagtagccgc tgtcacaatg gacacctcac ggcggtagca gaagcagccc
      781 ccgttaccag gtcaatcccg gtaacggggg ctaccgcccc tttccgctgc gcgcgtacgc
      841 gcagcaccta catcccgcga tgaccactgg gcctgagaac caccggcggg ctcagggagc
      901 gctcaatctg aagccgtgaa catcggccac attggccgat gacgccagtc gatcgcacat
      961 ctactctcac caagcgaaac gacgtgaaac gaacgggaag cagggggacg cccgagcctc
     1021 gctcacgtga cgactgccct cacccgaagg gctgcgctgg cttgtcagca agatgtccaa
     1081 ctcgaagggc cagcccagca atcccggtaa cggggctgcc acccctttcc gatgtgcata
     1141 taagcacagc acctatgtca gtcccaaggg aaaaggagca cagggatgct gaatctcttc
     1201 tcgtccaggt cccgcggtca tgccgggcga cgccggcggc gcggcacctg gctgagcgtg
     1261 gtgaccgtag ct
//
LOCUS       DASRPQ010002502         1022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3129621, whole genome shotgun sequence.
ACCESSION   DASRPQ010002502 DASRPQ010000000
VERSION     DASRPQ010002502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3129621"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1022
                     /locus_tag="VFD73_28055"
     CDS             <1..>1022
                     /locus_tag="VFD73_28055"
                     /inference="COORDINATES: protein motif:HMM:TIGR00177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HZI77825.1"
                     /translation="GYALNIEGWDGDPLTVSQQVFAGLAPETLAPGTCARIFTGAPVP
                     PGANCVEMQENTEVLDDGRIRFKQPLSAGSNIRPQGQENRVGDVLLRAGKRLGPFELA
                     VAAAQGCTHVQVVRRPRVALLSTGDELVEPGNPLKPGGIYNSNRTLLSHWLSALGCEV
                     IDAGILPDEPRQTRLKLEQLQHTADLMLSTGGVSAGDADCLGQVLRECGKPLLWKLSI
                     KPGKPLTVGHFGRVPVIGLPGNPTSALVTFGLLARVYLLRIQGVEDVEPLSFPVRVGF
                     AWPKPGSRREYLRAKLETGRAVLYPNQSSGVLLGASWADGLVEVPEGCTLEVGDTARF
                     IPFSEL"
BASE COUNT          174 a          312 c          350 g          186 t
ORIGIN      
        1 gggtatgccc tgaatatcga gggttgggat ggggatccgc tgaccgtgtc gcagcaggtg
       61 tttgccggtc tcgcccccga aaccctggca ccgggaacct gcgcacgcat cttcaccggc
      121 gctccggttc cgccgggggc caactgcgtg gagatgcagg agaacaccga ggtactggat
      181 gacggacgca tccgcttcaa acagcccctg agcgctggca gcaacatccg tccgcaaggc
      241 caggagaacc gcgtcggcga tgtgctgctg cgtgccggca agcgcctagg tccgttcgaa
      301 ctggcggtcg ctgcggcaca gggctgcacc catgtgcagg tggtgcgccg accacgggtg
      361 gcgttgctgt ccaccggcga tgaactggtc gagccgggca atcccctcaa gcccggcggc
      421 atctacaaca gcaaccggac attgttgagc cattggttga gtgccttggg ttgcgaggtc
      481 atagatgccg gcattcttcc cgacgaaccc cgccagacgc ggctcaagct cgaacagctg
      541 caacacacgg cagacctgat gctcagcacg ggcggtgtgt ccgccggtga cgccgactgc
      601 ctcggccagg tgctgcgcga gtgcggcaag ccgttgctgt ggaagctctc gatcaaaccc
      661 ggcaagccat tgaccgtggg ccacttcggc cgcgtgccgg tgattggcct gccgggtaat
      721 ccgacatcgg cattggtgac tttcggcctg ttggcccggg tttatctgtt gcggatacag
      781 ggcgtggaag acgtcgagcc gttgagcttc ccggtcaggg tcggctttgc ctggcccaaa
      841 cccgggagtc gccgcgagta cctgcgggcg aaactcgaaa ccggtcgagc ggtgctctat
      901 ccgaaccaga gttcaggcgt gttgctgggc gcatcctggg ccgacgggct ggtggaagtg
      961 ccggaaggtt gcacgctgga agtgggcgac acggcgcggt tcattccctt cagcgagctg
     1021 tt
//
LOCUS       DASRPQ010002503         1021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1248216, whole genome shotgun sequence.
ACCESSION   DASRPQ010002503 DASRPQ010000000
VERSION     DASRPQ010002503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1248216"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            325..>1021
                     /locus_tag="VFD73_28060"
     CDS             325..>1021
                     /locus_tag="VFD73_28060"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZI77826.1"
                     /translation="MTRETLIQQTHLTRLALVYVRQSTTKQVALNQESTRRQYQLTET
                     AHRLGWPQPRIQVIDDDLGLSSASSTQRTGFQRLVAAISLGEVGLVLVTEVSRLSRLN
                     SDWHRVIELCAVFETLIADEDGIYDPRDPNDRLVLGLKGTLFSAELHILRARMRGGLL
                     NKARRGALALRLPVGFRRLGDGTVVQDPDDQVRTMLQTLFDQFARLKTGRAVQRYFAQ
                     HELQLPRYVQSGPE"
BASE COUNT          172 a          361 c          285 g          203 t
ORIGIN      
        1 gctcaaacac ggtgagccgc acttcatcat ccagctcccg agtggcgccg cacagcttat
       61 tccagcacgc tggacctctc ccatgccgac cgctccggcc accgtcgcgc cgctgctcac
      121 atcccgctgt ttgcgccaac tggttagcat ggtggcttgc ctgtgtgacc cgttacctca
      181 ggaggccacc tatgacgcgc ccagccctcc ctcaactctg gacgaccttc tccccgcaga
      241 cccagcgcga actggtcagt ctgtggaccc tgctgctcca gcgtcatctt caggcgcagc
      301 ggatgcctcc atccggaggc gcttatgact cgcgagaccc tcatccagca gacgcatctg
      361 actcgcctgg cactggtgta tgtgcgccag tcgacgacca agcaagtcgc actcaaccag
      421 gagagcaccc gccgtcagta tcagttgact gagacggccc accgcctggg ttggccacaa
      481 ccacgcatcc aggtcattga cgacgacctc ggtctctcca gcgccagtag cacccagcgg
      541 actggctttc agcgtttggt ggctgccatc agtcttggcg aggtcggtct ggtgctggtc
      601 accgaagtct cccggctgtc gcgtttgaat agcgattggc accgggttat cgagttgtgt
      661 gctgtgtttg agaccctcat tgccgatgag gacgggatct acgacccacg cgaccccaac
      721 gaccgcctgg ttttgggcct caagggcacg ctcttttcgg ccgaactgca catcttgcgc
      781 gcccgcatgc gcggcggcct gctcaacaaa gcgcgccgcg gcgcgctcgc gcttcggttg
      841 ccggttgggt ttcgccggct tggggatggc acggtcgtcc aggaccccga cgaccaggtt
      901 cgcaccatgc tccagaccct cttcgaccag ttcgctcgtc tcaaaaccgg acgtgccgtc
      961 cagcgctatt ttgcccagca cgaactccaa ctcccgcgct atgtgcagag tggacccgag
     1021 c
//
LOCUS       DASRPQ010002504         1065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1248264, whole genome shotgun sequence.
ACCESSION   DASRPQ010002504 DASRPQ010000000
VERSION     DASRPQ010002504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1248264"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..728)
                     /locus_tag="VFD73_28065"
     CDS             complement(<1..728)
                     /locus_tag="VFD73_28065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HZI77827.1"
                     /translation="MTRDLEQQGITNVHSIQWNMPAASLYEEAVRRSEGLIARSGPLV
                     VRTGQYTGRSPKDKFVVRDPHNTDHIWWGPVNQPFDAERFHALHQHMLSYIQNSDVFV
                     QDLFVGADPAHRLSVRVITESAWASLFARNLFIRPTPAELEHFVPNFTVLNIPSFHAV
                     PERDGTRSETFIILNLAERLILIGGTAYAGEIKKSMFTVMNYLLPKQDVLSMHCSANI
                     GQQGDTALFFGLSGTGKTTLSADP"
BASE COUNT          190 a          305 c          352 g          218 t
ORIGIN      
        1 tccgggtcgg ccgagagcgt ggttttgcca gtgccagaga ggccgaagaa gagcgccgta
       61 tccccttgct ggccgatgtt cgccgagcag tgcatcgaca gcacatcctg cttggggagc
      121 aggtagttca tcaccgtgaa catggacttc ttgatttccc cggcataggc ggtgccgcca
      181 atcaggatca ggcgctcggc caggttgagg atgatgaacg tctcgctgcg ggtgccgtcg
      241 cgttccggca cggcatggaa gctgggaatg ttgaggacgg tgaaattggg gacgaagtgt
      301 tccagttccg caggggtggg gcgaatgaag aggttgcggg caaaaaggct ggcccaggcg
      361 ctttcggtga tgacccgcac cgacagccgg tgcgccgggt cggccccgac gaacagatcc
      421 tggacaaaga catcactgtt ctggatgtag ctcaacatgt gctggtggag ggcgtggaac
      481 cgctcggcgt cgaacggctg gttgaccggt ccccaccaga tgtgatcggt gttatgcgga
      541 tcgcggacca cgaacttgtc tttgggcgag cgacccgtgt actgcccggt gcgcaccacc
      601 agcgggccgc tgcgggcgat cagcccttcg ctgcggcgca ccgcttcttc atagagactg
      661 gccgcgggca tgttccactg aatcgagtgg acattggtga tgccctgctg ctccaggtct
      721 cgcgtcacga ctgattgcat gaaatcaacc tcctcgttga ttcactaagc tgtgcggggg
      781 ccgcatcctt gcgccggcac aactgctccc ttccgtgtat gcatgtatga gccgccgggc
      841 taacgtcgcg ccccgcacgg tctttgtggc agaagccttc cctgtcaaag tataatgata
      901 tccgggcgct tgtcaaggtt ctgcccgtgg gcggcatggg gcgaaacgat ggcgcgattg
      961 ctgctgagag agccgtagct atgacccgat ccccccttac gctcgaccag atcaatgccg
     1021 cggatcgcga caccttcgtg gccctgctgg gctgggtgtt tgagg
//
LOCUS       DASRPQ010002505         1683 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3129896, whole genome shotgun sequence.
ACCESSION   DASRPQ010002505 DASRPQ010000000
VERSION     DASRPQ010002505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1683
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3129896"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1066)
                     /locus_tag="VFD73_28070"
     CDS             complement(<1..1066)
                     /locus_tag="VFD73_28070"
                     /inference="COORDINATES: protein motif:HMM:NF037626.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77828.1"
                     /translation="MPSALLKSIRMVLPFVRDLFTDVEKLPAFSRVASHLKEGTGRIR
                     VSGLVPTAKALLLVLLQKAAGRPLIIVVPDNRAAEDLVPVLQAFCELTGAADPESVVS
                     LPNHDVLPFQNLSPHPEIQEERAVALWKIATGAASFVISPIAATALRLRSAEYYADLA
                     RTVRRAEMLNVDALLPHLNTVGYHSTDVVEMPGEYALRGGILDVYSPEAERPVRIEFF
                     GDEVESIRKFDPATQRSSSPVEEALLLPLTETPVSEELLGAVHARLSGKRITCNEEII
                     EQAVRSGGVTVFPGWEFYAPVAGANATVFDLLPRALVLTDEVEALRTEFDHVWTRIEQ
                     AHEGSGVGNLVRPSDLYVVPE"
     gene            complement(1176..>1683)
                     /locus_tag="VFD73_28075"
     CDS             complement(1176..>1683)
                     /locus_tag="VFD73_28075"
                     /inference="COORDINATES: protein motif:HMM:NF014344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="arginine deiminase family protein"
                     /protein_id="HZI77829.1"
                     /translation="IQPPGNTEAGDMVWLDSTTLLIGQGYRTNPAGIGQMRTLLQSQG
                     VEVISAPLPYGAGPSACLHLMSLMSLLDERTVLVDLPWLAVETVEQLHSRGYQLVEIE
                     YSERETLACNVLSLGDKRLLALEENQKTNQKLRQAGFDVRSFPGLELCVNGGGGPTCL
                     TRPLLRTT"
BASE COUNT          342 a          525 c          523 g          293 t
ORIGIN      
        1 cttccggcac aacgtataga tccgacggcc gcaccaggtt gcccactccg ctgccctcgt
       61 gcgcctgctc gatgcgagtc cagacgtgat cgaactcggt ccgcagcgct tccacttcgt
      121 cggtcagcac cagggcgcga ggcagtaaat cgaacaccgt ggcattagcg ccggccacgg
      181 gcgcataaaa ctcccacccg ggaaaaacgg tgacgccgcc ggagcgcaca gcctgctcga
      241 tgatttcttc gttacaggta atacgtttcc cggagagacg ggcatgcacc gcgcccagaa
      301 gttcttcgct gaccggagtc tcggtcagag gaagcagcag agcctcttcc acgggactgg
      361 aagagcgctg ggtcgcagga tcaaacttcc gtatggattc gacctcgtcg ccgaaaaact
      421 cgatgcgcac ggggcgctcg gcttccggcg agtacacatc gaggatgccg ccgcggagag
      481 cgtattctcc gggcatctcc acgacgtcgg tcgagtgata gccaactgtg ttgaggtggg
      541 gaagcagcgc gtcaacgttg agcatttcgg cacggcgcac ggtccgcgcc agatcggcat
      601 agtactcagc cgaacgcagc cgcagggcgg tcgcggcaat cggcgaaatc acaaaagacg
      661 ccgcgcccgt ggcgattttc cagagcgcca ccgcccgctc ctcctggatt tccgggtgcg
      721 gggacagatt ctggaagggg agcacatcgt ggttgggcag ggagaccacg gactcagggt
      781 cggcggcccc ggtcagctca caaaaagcct gcagcaccgg aaccaggtct tccgcggcac
      841 gattgtccgg gaccacaatg atcagcggac gccctgccgc cttctgcagc aagactaaaa
      901 gcaaggcttt tgcggttgga accaatccag agacacgaat ccgccccgtg ccctctttca
      961 gatgggaggc cacacgcgaa aaggccggca acttttccac gtccgtgaaa agatcgcgga
     1021 cgaaggggag aaccatgcgt attgatttta acagggcgga aggcaatgtg ggcgcgagcg
     1081 tcccgctcgt gccgggcctt gcacgagcga ggacgctcgc gcctacacta aagccagcgg
     1141 agcttcggtc tgccgggccg gtgggacccc tgcccctacg tggttcgcag caggggacgg
     1201 gtcaggcagg ttgggccgcc gccgccgttg acgcatagtt ccaagccggg gaaacttcgg
     1261 acgtcaaatc ctgcctgacg aagcttctga ttggtcttct gattctcttc cagagcgagc
     1321 aggcgcttgt cgcccagcga aagaacgttg caggccagcg tctcgcgctc agaatattcg
     1381 atctcgacca gctggtagcc tcgcgagtga agctgttcca ctgtctcgac cgccagccag
     1441 ggcaaatcca ccagcacggt ccgctcgtcg agcaggctca tcagcgacat gagatgcagg
     1501 caggccgacg gtcctgctcc gtatggcagg ggcgccgaaa tcacttccac accctgcgac
     1561 tgaagcagcg tcctcatctg gccgattccc gcagggttgg tgcgatagcc ctggccgatc
     1621 agcagcgtag tggaatcgag ccagaccatg tctccggctt cagtgtttcc tggcggttgg
     1681 att
//
LOCUS       DASRPQ010002506         2012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_623154, whole genome shotgun sequence.
ACCESSION   DASRPQ010002506 DASRPQ010000000
VERSION     DASRPQ010002506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_623154"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..295)
                     /locus_tag="VFD73_28080"
     CDS             complement(<1..295)
                     /locus_tag="VFD73_28080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77830.1"
                     /translation="MTWDMAECSPTRLGCAGAHERDERVVYLAVMHSEAAPAPSRFHE
                     SNLWSTPIRDLGLTLEGTRLEPILAEFMEEVRQAGITRVRPRFYLSTEWGVPFE"
     gene            294..1535
                     /locus_tag="VFD73_28085"
     CDS             294..1535
                     /locus_tag="VFD73_28085"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZI77831.1"
                     /translation="MTPSDSAPGDREPQAGVPPTVKGLSLVSLFNDFASEMVYPLLPA
                     YVTRTLGSGALLLGILDGASDLTSSVLKWISGRLADRPGWRRPLILAGYGTAVLVRPL
                     IAIANAAWQVVGFRVIDRVGKGLRTPPRDALIADVTPVALRGRAFGFHRGADHFGAVL
                     GSLAAWWLLREGADVRRVIGWSVFPGVFAFGVLFLVLRGKAGHQSRLASPSYEDAQKT
                     RTSDHSRDSRLVTRDSFWPPVIALTALAFFRLPETLLILRLQDRGVAVAMVPLIWAGL
                     HVVRSATSYPGGWLSDRLGPRQVVAAGGLVFAAVAYGLGRSVAPATATILFLVLGLVA
                     GLSESGERAMIARLAPVRTGRGFGAYHALTGVAALPAGLIFGALYQSKGGPVALWASA
                     IGMLLAVGYWEVVSPGRGEAG"
     gene            1565..>2012
                     /locus_tag="VFD73_28090"
     CDS             1565..>2012
                     /locus_tag="VFD73_28090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77832.1"
                     /translation="MAVLFPIAAAAQVQVRVGDPTRCTYSELHEGLRAGTPAADSLAA
                     ILHSSSPRKLWRLVQSALRGAGDMNSGLVAFTRLAELRSRAYADSARKMERRLAQAPL
                     PPFPANPGLTAEDVLPSLHAIELERRRAVLGDSAVLADILRRVTKKE"
BASE COUNT          278 a          639 c          688 g          407 t
ORIGIN      
        1 tctcgaaggg aacgccccac tcggtggaga gatagaagcg gggccgaact cgagtaattc
       61 cagcctggcg gacctcctcc atgaactcgg ccaagatcgg ctccagcctg gtgccctcga
      121 gggtcaggcc gagatcacgg atgggagtcg accagagatt cgactcgtgg aaccgagagg
      181 gggcgggggc ggcctccgag tgcatgacgg caagatatac tacgcgctcg tctcgttcgt
      241 gcgctccggc acatcccagc cttgtggggc tacattcagc catgtcccag gtcatgaccc
      301 cctccgattc tgcgcccggc gaccgcgagc cgcaggcagg tgttcccccc acggtcaaag
      361 ggctctcgct cgtctcgctg ttcaacgact ttgccagcga gatggtctac ccgctgcttc
      421 ccgcttacgt cacccggacc ctgggaagcg gggcgctcct gctcggaatc ctggacggcg
      481 cgtcggacct cacctcctcg gtgctgaaat ggatcagcgg tcgccttgcc gaccggcctg
      541 gttggcggcg gccgctcatt cttgcgggct atgggactgc cgttctggtc agacctctca
      601 tcgccattgc caacgccgcc tggcaggtgg tgggatttcg agtcatcgat cgggtaggga
      661 agggcctccg gacgccgccc cgggacgcgc tcatcgccga cgtcactccg gtagcgctcc
      721 ggggcagggc attcggcttt caccgcggcg ccgaccactt cggcgctgtg ctcggctccc
      781 tagcagcctg gtggctgctg cgcgaaggcg ccgacgtacg gcgagtgatc ggctggagcg
      841 tctttcccgg cgtattcgcc ttcggggtgc tgttcctggt gttgcgcggc aaggccggtc
      901 accagtcacg actcgcgagt ccttcgtacg aggatgctca gaagactcgt acttcagacc
      961 acagtcgcga ctcgcgactc gtgactcgtg actcattctg gcctccggtg atcgccttga
     1021 ctgcgttggc cttcttccgt ctgcccgaga ccttgctgat cctccggctt caggaccgcg
     1081 gagttgccgt tgccatggtg ccgttgattt gggccgggct gcacgtggtg cggagcgcca
     1141 cctcttatcc tggcggctgg ttgtccgatc gtttggggcc acggcaggtc gtcgccgcgg
     1201 gcgggctggt cttcgctgcc gttgcctatg ggctcggtcg ttcggtcgcg cctgcaaccg
     1261 ctacgatctt gtttctagtg ctcggcttgg tggccgggct cagcgaatcg ggagaacgcg
     1321 ccatgattgc tcggctggct ccggtccgca ccggccgagg gtttggggcg tatcacgcgt
     1381 tgaccggagt tgcggcgctt cccgcgggtc tcatcttcgg agcactgtac cagtccaagg
     1441 gcgggccggt tgcgctctgg gcgtccgcca tcgggatgct gctggcggtc ggctattggg
     1501 aagtggtttc tcccgggcga ggagaggcag gctgacggtg cagcgtcagt gctgggtact
     1561 cggggtggcc gtcctgttcc cgattgctgc tgcggcgcag gtacaggtgc gggtgggcga
     1621 tcccactcgg tgcacctact ccgagctgca tgaggggctc cgggccggca cgccggcagc
     1681 ggactccctt gcggccattc tccactccag ctcaccccgg aagttgtggc gtctggtgca
     1741 gtcggcgctt cgcggagccg gcgacatgaa ctcgggcctg gtggcgttta cccgtttggc
     1801 cgagctgagg agccgagcct atgccgatag cgccaggaag atggagcggc ggctcgcaca
     1861 ggcgcccttg ccgccgtttc cggcgaaccc ggggctcacg gcagaagatg tgcttccctc
     1921 attacatgct atcgagctgg agcggcgtcg agcggtattg ggagactctg ccgtgctggc
     1981 ggacattctg cggcgggtca ccaagaagga at
//
LOCUS       DASRPQ010002507         1947 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4379922, whole genome shotgun sequence.
ACCESSION   DASRPQ010002507 DASRPQ010000000
VERSION     DASRPQ010002507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1947
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4379922"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1328
                     /locus_tag="VFD73_28095"
     CDS             <1..1328
                     /locus_tag="VFD73_28095"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HZI77833.1"
                     /translation="LAEEHRAFGELAVGDVSRKLVQIFFATAALKKDDGVPPGSATPR
                     QIRRLAIVGSGFMGAGIAGTAVLNVEVDTRLKDADLGRVGKGLNAAGKLLKERLDRRR
                     LTRQQYERLSALLSGSADYRGFNRADLVIEAVFEDLDTKRRVLTEVESEVRPDTIFAT
                     NTSTIPIRHIAEGARRPERILGMHFFSPVERMPLLEVIPTAATSPDTLVTAVRFGRRM
                     GKTVIVVADRPGFWVNRILSPYLNEAGHLMQEGVPIQVLDQTMTGFGFPVGPVALLDE
                     VGLDVADKAGSVMHEAFGERMKPAGTLTRMLGATRLGRKNGRGFYRYREGHKAGVDKS
                     VYPLLGIRPVEADRDLVERRLVYSMLNEAAMACAENVVRSPRDADIGAIFGIGFPAFR
                     GGPLRMIDDLGAGRVVETLYQLQELFGERFRPAAALLEMSRRSGRYYPA"
     gene            1352..>1947
                     /locus_tag="VFD73_28100"
     CDS             1352..>1947
                     /locus_tag="VFD73_28100"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZI77834.1"
                     /translation="MVWTVFAFALALYLVLLVLLRLNEARLVYFPGQQRTLLSPPANL
                     RLPVRRVEFSTEDGVKLVSWVLPAAAGSTGFWVLICHGNAGNLSEFDRPLHYAGLHRL
                     GLSLLAFDYRGYGESGGSPTESGLYRDADAAYRYLRHDLGVPPERIIVFGHSLGSAVA
                     VDLASRVAIAGLILEGAVTSVWERGQELYPYLPVRWIAG"
BASE COUNT          313 a          602 c          650 g          382 t
ORIGIN      
        1 ggctggccga ggagcaccgc gccttcggcg agcttgctgt gggggacgtg tcccgcaagc
       61 tggtgcagat cttcttcgcg acggcggcgc tcaagaaaga cgacggagtt cctccgggca
      121 gcgctactcc gcgacagatc cgacgcctgg ccatcgtggg ctccggcttt atgggggcag
      181 ggatcgccgg caccgcggtg ctcaacgtgg aggtggacac ccggctcaag gatgccgatc
      241 tcggccgggt gggcaaaggg ctcaacgccg ccggcaaact tctcaaggag cggctcgatc
      301 gccgccggct gacccggcag caatacgaac gcttgagcgc gctgctctcc ggctcagccg
      361 actaccgtgg attcaatcgc gcagatctgg tcatcgaggc ggtgttcgag gatctggaca
      421 ccaagcgaag agtgctgacc gaggtggaat ccgaggtccg gccagacacc atcttcgcca
      481 ctaacacgtc gaccattccg atccgccata tcgccgaggg ggctcgccgt cctgagcgaa
      541 ttctgggaat gcatttcttc tctccggtcg aacgaatgcc cttgctcgag gtcatcccga
      601 cagcggccac cagccccgac acgctggtga ccgcagttcg attcggccgc cggatgggaa
      661 agacggtgat cgtagtagcc gaccggccag ggttctgggt caatcgaatc ctctccccct
      721 atctgaacga ggccggacac ctgatgcagg aaggcgtgcc gatccaggtg ctggaccaaa
      781 cgatgaccgg tttcgggttc ccggttggcc ccgtggctct gttggatgag gtgggcctgg
      841 acgtggccga caaagccggg agcgtaatgc acgaggcgtt cggcgagcgg atgaagcccg
      901 cagggacgct cacccggatg ctcggggcca ctcgcctggg gcgcaagaac ggtcgcggat
      961 tttatcgcta ccgggaggga cacaaggcgg gagtcgacaa gagcgtttat ccgctgctcg
     1021 ggatccgccc cgtggaggcc gatcgggatc tggtcgagcg ccggctggtg tacagcatgt
     1081 tgaacgaggc ggcgatggcg tgtgccgaaa atgtggtgcg cagcccgcgc gacgccgaca
     1141 tcggcgccat cttcggaatc gggttcccgg cgttccgggg cgggccgctt cggatgatcg
     1201 acgatctggg agcgggccgg gtcgttgaaa cgctgtacca gctgcaagag ctgttcggcg
     1261 agcgctttcg tccggcggcc gcattgctgg agatgtcccg ccgctcgggc cgctactatc
     1321 ccgcttgagt cctacggcct cgcttcgccg aatggtctgg accgtctttg cgtttgccct
     1381 tgcgctctat ctcgtcttgc tggtcttgct ccggctcaat gaagcaaggc tagtctactt
     1441 tccgggccag cagcgcactc tcctctctcc tcctgccaat ctccgccttc cggttcggcg
     1501 cgtcgaattt tctactgaag acggcgtgaa gctggtgagt tgggtgctgc ctgccgcagc
     1561 cgggtccacc ggtttctggg tgctcatctg tcatggcaat gccggcaatc tttccgagtt
     1621 cgaccgacca ctccactacg ccggcctgca tcgcctgggc ctgagtctgc tggcattcga
     1681 ttatcgcggg tatggtgaga gcgggggttc cccgacggag tcagggcttt atcgcgacgc
     1741 cgatgccgca taccgctacc tccgccacga tcttggcgtc ccaccggaac ggattatcgt
     1801 gttcggccac tccctcggat cggcggtcgc ggtagatctg gcgagccggg tagcaatcgc
     1861 gggcctcatt ctggaggggg cggtgacctc ggtctgggag cgtggtcagg agctctatcc
     1921 gtaccttccg gtgcgttgga ttgcggg
//
LOCUS       DASRPQ010002508         1357 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2500395, whole genome shotgun sequence.
ACCESSION   DASRPQ010002508 DASRPQ010000000
VERSION     DASRPQ010002508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1357
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2500395"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            152..805
                     /locus_tag="VFD73_28105"
     CDS             152..805
                     /locus_tag="VFD73_28105"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZI77835.1"
                     /translation="MSDRLAALYLRVSTLDQHPETQLHDLRQMAAQRGLQVAGIYEDR
                     ITGTRASRPGLDRLMRDARQGKFQVLVVWSYDRLARSVRHFLETLDELNRLGVEFLSF
                     REQLDTGGPLGRAVTVIIAAISELERHLIVERVRSGMRRAKSEGRRLGRPPLPVDVES
                     LVRDRQGGLSMSQLANRYEVAESTVRRLLRQAEGAPPKRSVQPAPQLTENTRPVSAV"
     gene            1110..>1357
                     /locus_tag="VFD73_28110"
     CDS             1110..>1357
                     /locus_tag="VFD73_28110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77836.1"
                     /translation="MATKRDGVFVWITWLARVMAGEQSCEWASWFKAHYENYHKAPSD
                     FDTAKWNIGHTRQLRQLRLERSKLGERVFLEGENAIRLT"
BASE COUNT          252 a          409 c          476 g          220 t
ORIGIN      
        1 tgaatccgcc tcccgctcta ccgggatcgg acctcgggga cgcgaccgac gggctgtagg
       61 cggggcatcg agggggtgcc ggcgggccag gctcgacggg gacctcccca tttctgtaag
      121 tatgtaagta cagtttttct gagggaccct gatgtcggac aggttggccg ccttgtacct
      181 gcgagtttcc accctcgatc agcatcccga gacccaactg cacgacctgc gccagatggc
      241 cgcgcagcgc gggctgcagg tcgccggcat ctacgaggac cggatcacgg gcacccgcgc
      301 ctcccgcccc ggcctcgacc ggctgatgcg cgacgcccgc cagggcaagt tccaggtgtt
      361 ggtggtctgg agctacgacc ggctggcccg ctccgtccgc cacttcctgg aaaccctgga
      421 cgagttgaac cgcctggggg tggagttcct cagcttccgg gagcagctcg acacgggcgg
      481 gccgctgggc cgggcagtca cggtgatcat cgccgccatc agcgaactgg agcgccacct
      541 gatcgtggag cgggtgcgat cggggatgcg ccgggcgaag tcggaggggc ggcgcctggg
      601 gcggccgccc ctccccgtgg acgtggaaag cttggtccgt gaccgtcagg gcgggctcag
      661 catgagccag ctggcgaacc gatacgaggt ggccgaaagc acggtgcgga ggctgctgcg
      721 gcaggctgaa ggcgccccgc caaaaaggtc ggtgcagccc gccccccaac tgactgaaaa
      781 cacacggccg gtttcggccg tttaaggccc gccaaaaggt gtaggttttg gcgggcggtc
      841 gggcaatcgg caagcgagtt accagctggg cctgaggtgg agtggcgaag gggggggaaa
      901 agaagcgcca ggacttgctt cggattgagg agaaagcgtg gagccgggac aggctgagct
      961 tgagcgctca gcgcatgtca cggatttagc cgagggtttc tgccttttgg gtgcggtcgg
     1021 attacaagct caatcttcca agagcgtggt ccgcctaccc ggcgtatcac tcgacggagt
     1081 gatcgtcaac ctacaggagg gggttcaata tggccacgaa gcgcgacgga gtctttgtct
     1141 ggatcacctg gctcgccagg gtcatggcgg gagagcagag ttgcgagtgg gccagctggt
     1201 tcaaggccca ctacgaaaac taccacaagg cgccgagcga ttttgacacc gcgaagtgga
     1261 acatcggaca cacacgtcaa ctgcgccaac tgcggctcga gcgcagcaaa ctcggcgagc
     1321 gtgtcttcct cgaaggcgag aacgccatcc gcctgac
//
LOCUS       DASRPQ010002509         1346 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1248984, whole genome shotgun sequence.
ACCESSION   DASRPQ010002509 DASRPQ010000000
VERSION     DASRPQ010002509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1346
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1248984"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..943)
                     /locus_tag="VFD73_28115"
     CDS             complement(<1..943)
                     /locus_tag="VFD73_28115"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HZI77837.1"
                     /translation="MVIRSALALRLMVYAPSGAVVAAPTTSLPERIGGPLNWDYRFCW
                     LRDASLTLRALAGLGYLDEAHAFVNWLLHATRLTEPELRVLYDVHGNKPENERILDHF
                     AGYRGSRPVRIGNLAVEQRQLDVYGEVIDAVTHFIKAGGTLDRETEGVLRDWGEYICR
                     HWNEPDEGIWEPRTGRANHTHSRLLCWVALDRLVRLHEKDHMRWAPADKFRENRDAIR
                     RQIEERAWNPTLESYVAELDGERLDATLLLLAWYDFEPAGSERMKATYRRIRERLGAR
                     DGLLYRYHRDTPVLPGDDHGKPASPGEGAFGISSFWGV"
     gene            complement(937..>1346)
                     /locus_tag="VFD73_28120"
     CDS             complement(937..>1346)
                     /locus_tag="VFD73_28120"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HZI77838.1"
                     /translation="GYLDEAHAFVNWLLHATRLTEPELRVLYDVHGNKPENERILDHF
                     SGYRASRPVRIGNLAVEQRQLDVYGEVIDAVTHFIKAGGTLDRETEGVLRNWGEYICR
                     HWASGPASLLPAPSSGGRAGHRGLGTPVPARRW"
BASE COUNT          232 a          457 c          426 g          231 t
ORIGIN      
        1 ccacccccca gaaactggag atgccgaacg ccccttctcc cggggaagca ggcttaccgt
       61 ggtcatcgcc gggaagcact ggagtgtcgc ggtgatagcg gtacagcaac ccgtctcttg
      121 caccgagccg ctcgcgaatt cgccggtagg tggctttcat acgctcggag ccggccggtt
      181 cgaagtcgta ccacgcaagc agcagcagcg ttgcatccag ccgctcgcca tcgagctccg
      241 cgacataact ctccagcgtc gggttccagg cccgctcctc gatctgccgg cggatggcgt
      301 cgcggttctc cctgaacttg tcggccggcg cccagcgcat gtggtccttc tcgtgcagcc
      361 ggacgagtcg gtcgagcgcc acccagcaga ggagccgtga gtgggtgtga ttcgcccggc
      421 cggtgcgggg ctcccagatc ccttcatccg gctcattcca gtggcggcag atgtattcac
      481 cccagtcgcg caagacgcct tcggtctcgc ggtcgagcgt gcctccggcc ttgatgaagt
      541 gggtgacggc atcgatcact tctccgtaca cgtcgagctg gcgctgctcg actgccaagt
      601 tgccgattcg taccggccgc gaccctcgat acccggcaaa gtggtcgagg atccgctcgt
      661 tctccggctt gttgccgtgg acatcgtaga gcacccggag ctccggctcg gtcagacgag
      721 tggcgtggag cagccagttc acgaaggcgt gcgcctcatc caggtagccc aggcccgcga
      781 gcgctcgcaa cgtgagcgag gcatcacgga gccagcagaa gcgatagtcc cagttgagcg
      841 gaccgccgat ccgctccggc agcgaggtcg tcggggccgc aaccacggca cccgatggcg
      901 cgtagaccat caacctcagc gccaacgcgc tccgaatcac catctccggg cagggaccgg
      961 agtaccgagc ccgcgatgcc cagctctgcc accactcgac ggtgcgggca agagcgatgc
     1021 gggaccactc gcccagtggc ggcagatgta ttcaccccaa ttgcgcaaga cgccttcggt
     1081 ctcgcggtcg agcgtgcctc cggccttgat gaagtgagtg acggcatcga tcacttctcc
     1141 gtacacgtcg agctggcgct gctcgactgc caggttgccg atccgcaccg gccgcgacgc
     1201 tcgatagccg gaaaagtgat cgaggatccg ctcgttctcc ggcttgttgc cgtggacatc
     1261 gtagagcacc cggagctccg gctcggtcag acgagtggcg tggagcagcc agttcacgaa
     1321 ggcgtgcgcc tcatccaggt agccca
//
LOCUS       DASRPQ010002510         2479 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2500471, whole genome shotgun sequence.
ACCESSION   DASRPQ010002510 DASRPQ010000000
VERSION     DASRPQ010002510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2479
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2500471"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..601
                     /locus_tag="VFD73_28125"
     CDS             <1..601
                     /locus_tag="VFD73_28125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77839.1"
                     /translation="IPVVRIALKGGAVDTIGHLASPEYGDATFGEQVQQAAKVFAPND
                     FFGVLPDGTAWMARGRENRVDWRSPDGRWTIGKAHEYTKVPVTQADKDRVLAQVREHG
                     KQFGMPQGLRVEYPFAENKAPFELALGRPSGEVWLQRPRPRENAPLVYDVFDRKGVWR
                     REVGFPKDASLAGFGLQGAIYASVKNQDGSRTVARFRMK"
     gene            complement(610..1335)
                     /locus_tag="VFD73_28130"
     CDS             complement(610..1335)
                     /locus_tag="VFD73_28130"
                     /inference="COORDINATES: protein motif:HMM:NF017373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77840.1"
                     /translation="MNELWQRILIGAEQIGSVLPALLGAAVIMLTGYFLARQVQRWAD
                     DTLKRLNFDRVASAGGLDEVVGRTGSRLDPVRALAKLIFWLIMLVVILLASTALGLES
                     INEMFGTMLAFIPTLIASIVIVILGIIVGEFVRALIVASAGSVSGVPTVAKMAKGAVI
                     VIALFMALQQVGVAEEIVTAAFTLILGAGALAVGLAFGLGNRELAGEITRRWYEQGQE
                     RDRRRKHLGGPNTPPRDEPPILD"
     gene            complement(1332..2276)
                     /locus_tag="VFD73_28135"
     CDS             complement(1332..2276)
                     /locus_tag="VFD73_28135"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HZI77841.1"
                     /translation="MVRIEAMALNRLDLFVAEGLPGIRYSYPHIVGSDGAGTVHQVGA
                     GVEGFRLGARVMINPTLSCGHCPACSAGEHSVCDEIRVLGEHLPGTAAELIVVPAENL
                     AQVPPGMSWPQAAAFSLATLTAWRMLTTRARLESGETVLIWGIGGGVALAALQVARLL
                     GGRTIVTSGDDGKLDAARKLGADHAINYTSSDVAQEVRSLTDGRGADVVVDSVGEQTW
                     KATLRSLRRGGRLVVCGATSGPIVSLDLRRLFWHQWSFLGSTLGSRREYAEIVKLAGE
                     GKLWPVIDTVLPLSRAVEAYQRMMAGQQVGKIVLEVAE"
BASE COUNT          469 a          787 c          791 g          432 t
ORIGIN      
        1 tattccggtt gttcggattg cgctgaaggg cggagcggtg gacaccatcg ggcacctggc
       61 atcgcctgag tatggcgacg caacctttgg cgagcaggtc cagcaagccg ccaaggtctt
      121 cgcgcccaac gatttcttcg gtgtactacc ggacgggacg gcctggatgg cccgcggaag
      181 agagaaccgg gtagactggc gctccccgga cggtcggtgg accatcggaa aggcccatga
      241 gtacaccaaa gtgcccgtca ctcaagcgga caaggaccgg gtcctggcgc aggtccgtga
      301 gcacggcaag caattcggga tgccgcaagg attgagagtg gaatatccct ttgccgagaa
      361 caaggcaccg ttcgagctcg cgcttgggag acccagtgga gaggtctggc tgcagcgccc
      421 gcggccgcgg gaaaacgccc ccctggtgta cgacgtgttc gatcgaaagg gtgtctggcg
      481 ccgggaggtt ggctttccca aggacgcttc tcttgccggc ttcggattac agggagcgat
      541 ctacgcttcg gtgaagaatc aggatggatc caggacggtg gcgcgctttc gaatgaagta
      601 gtgtcgtgct cagtccagaa tgggcggctc gtcgcgtggc ggggtgttgg gaccaccgag
      661 gtgtttccgg cgccggtcgc gctcttggcc ctgttcgtac caccggcggg taatttctcc
      721 agcaagctct cgattgccca agccgaacgc gagtccgact gccagggcac cggcgccgag
      781 gatgagcgta aatgcagcgg taacgatctc ctcggcgacg cccacctgct gaagcgccat
      841 aaatagcgca atgacgatca ccgcgccttt cgccatcttc gccacggtgg gtaccccgga
      901 gacgctccct gccgatgcca cgatgagcgc gcggacgaac tctcccacga tgattccgag
      961 aatgacgatc acgatgctgg cgatcagggt ggggatgaac gccagcatcg tcccgaacat
     1021 ttcgttgatg ctttcgaggc caagggcagt gctggcgagc aggatcacca ccagcatgat
     1081 cagccaaaag atcagcttgg ccagagcgcg gaccggatcc agtcgcgagc cggtgcggcc
     1141 aaccacctcg tcgaggccgc cggcgctcgc cacccgatcg aagttgaggc gcttgagcgt
     1201 gtcatcagcc cagcgttgaa cctgacgggc gaggaagtac ccggtaagca tgatgaccgc
     1261 ggcgcccaac aatgccggga gcacgctgcc gatctgttcc gccccgatca ggatacgttg
     1321 ccagagctcg ttcactcagc cacctcgagg acgatttttc cgacctgctg gccagccatc
     1381 attcgctggt aggcctcgac tgctcggctc aggggcagga cggtgtcgat gaccggccat
     1441 agcttgccct cacccgccag cttcacgatc tcggcatact ctcgccgtga gcccagcgtg
     1501 gaaccgagaa aactccattg gtgccagaac agtcgccgca gatccagaga gactattggg
     1561 ccgctggtcg ctccgcacac gactaacctt ccaccgcgac ggagtgagcg gagcgttgcc
     1621 ttccaggttt gttcccccac gctgtcgacg acgacatcgg cacctcggcc atcggtaagc
     1681 gagcggacct cctgggcgac atcggagctt gtgtagttga tcgcatggtc tgccccgagc
     1741 ttccgggctg cgtccagttt tccgtcgtct ccgctggtca caatagtccg gccgccgagg
     1801 agccgcgcca cttgcagggc cgccagggcg acgccgccgc caatgcccca gatgagtacc
     1861 gtctcgccgg actccaaccg ggcccgcgtg gtcaacatcc gccacgctgt gagagttgcc
     1921 agcgagaatg ccgcggcctg gggccaggac attccgggcg gcacctgagc caggttttcg
     1981 gccggaacca cgatgagctc ggcagccgtt cccgggaggt gctcaccgag cacccgaatc
     2041 tcatcacaga ccgagtgctc gcccgctgaa cacgcgggac aatgaccgca cgagagcgtg
     2101 ggattgatca tcacccgggc gcccaaacga aacccttcga ctccagcacc tacctggtgg
     2161 acggtcccgg cgccgtccga cccaactata tgcggatagc tgtacctgat cccgggcagt
     2221 ccttcggcga cgaagaggtc caggcggttg agcgccatcg cctcgatgcg gaccatcacc
     2281 tccccggggc ttgggggatc cggttccggc aactcctgta cccggaggtg tcgaatgccc
     2341 cccggtcccc tgaggacgag tgccttcatc gggtggcagg ctttagaagg aaggcgtcag
     2401 aacctgctcc cctggctgca gggggattgg gactggggcg gctttggtac tcagggacac
     2461 gaggtacagc ccagtttgc
//
LOCUS       DASRPQ010002511         1004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4380410, whole genome shotgun sequence.
ACCESSION   DASRPQ010002511 DASRPQ010000000
VERSION     DASRPQ010002511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4380410"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..881)
                     /locus_tag="VFD73_28140"
     CDS             complement(<1..881)
                     /locus_tag="VFD73_28140"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZI77842.1"
                     /translation="MQSRDLRARCSSRTTTRTAPLTSSEPLRYFQRTQDALGSRYRLE
                     RTVAVTPEQVLFEAYDQILKRRVSLRVNFYADPAIRAWFLREAEALSRLDHPAIRHVY
                     DAGIIGELAFRVGNWIEGEGLQQALHRGPRPIPMVHALARDILSALEHAHGYGIIVRR
                     IVPPSVILSTGGRATITDLRFCNYTLLAIPPGTVPTSPSYMAPEVRDGSAGDATSDVY
                     TAGALLYAAVTGQEPPLDPAMIRPPTALRPACTRAIERIILRAMQPAQEDRYLTAVEM
                     LEDFASDAGTFETPAVPV"
BASE COUNT          185 a          306 c          351 g          162 t
ORIGIN      
        1 accggcaccg ccggggtctc gaaagtgcct gcgtccgagg cgaaatcctc cagcatctcg
       61 accgcggtca ggtagcggtc ctcctgggcc ggctgcatgg cgcgaagaat gattcgctcg
      121 atggcgcgag tgcaggctgg gcggagcgcg gtgggaggcc ggatcatcgc cgggtcgagc
      181 ggcggctcct gtccggtcac agcggcataa agcagcgctc ctgcggtgta cacgtcactg
      241 gtcgcatcac cagccgagcc gtcgcgcacc tccggtgcca tatacgaggg ggacgtcggg
      301 accgtgccgg gtggaatcgc cagcaacgta tagttgcaga accgaagatc ggtaatggtg
      361 gctcgcccgc cggtgctcag gatgacggac ggcgggacga tgcgtcgaac gatgatgcca
      421 tacccgtgcg cgtgttccag cgcactcagg atgtcccggg ccaatgcgtg gaccatggga
      481 atggggcgag ggccccggtg cagcgcctgc tgcagtcctt ctccttcgat ccagtttccc
      541 actcggaacg cgagctctcc gatgatgccg gcgtcataga cgtgacggat ggcagggtgg
      601 tccagccggc tcagcgcttc cgcctcgcgg agaaaccagg cccggatcgc cggatcggcg
      661 tagaagttga cgcgcagact gacgcggcgc ttgaggatct ggtcgtacgc ctcgaataga
      721 acctgttcgg gagtgaccgc gacagtccgc tccagccggt aacggctccc cagcgcgtcc
      781 tgggtacgtt ggaaatagcg cagcggctcg gagctggtca gcggagcagt ccgcgtcgtc
      841 gttcgagacg aacatcgcgc ccgcagatcg cgggattgca ccagcgccgg ctttgattgg
      901 gagagtcgtc agtaaaaaag agagaacagt tgagcccagc acactgccga accagcagca
      961 gcggctcagc cagagtggct gcggctgagc gggcaatcgc ctgg
//
LOCUS       DASRPQ010002512         1193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2501634, whole genome shotgun sequence.
ACCESSION   DASRPQ010002512 DASRPQ010000000
VERSION     DASRPQ010002512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2501634"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..378)
                     /locus_tag="VFD73_28145"
     CDS             complement(<1..378)
                     /locus_tag="VFD73_28145"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyketide synthase"
                     /protein_id="HZI77843.1"
                     /translation="MSAAQLVKAPRTPIAVIGMACRLPGGITSPDQLWEALLRGDDLV
                     TEVPPDRWDADEYYDPQPGMPGRSACKWGAFLDDVAGFDADFFGITEKEATAMDPQHR
                     LLLETSWEAMEHGGLTPHALADSR"
     gene            complement(649..721)
                     /locus_tag="VFD73_28150"
     tRNA            complement(649..721)
                     /locus_tag="VFD73_28150"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(686..688),aa:Ala,seq:tgc)
     gene            complement(870..943)
                     /locus_tag="VFD73_28155"
     tRNA            complement(870..943)
                     /locus_tag="VFD73_28155"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(907..909),aa:Ile,seq:gat)
     gene            complement(1014..>1193)
                     /locus_tag="VFD73_28160"
     CDS             complement(1014..>1193)
                     /locus_tag="VFD73_28160"
                     /inference="COORDINATES: protein motif:HMM:NF023511.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3566 domain-containing protein"
                     /protein_id="HZI77844.1"
                     /translation="NTSGSSGELVSSGTIFGGAVLIGLVNIVLLTAAATIAAFIYNLT
                     TDLIGGIEVTLADRD"
BASE COUNT          221 a          382 c          378 g          212 t
ORIGIN      
        1 gcgcgagtcg gcgagagcat gcggggtgag cccgccgtgc tccatggcct cccatgaggt
       61 ttccagcagc aggcgatgct gcggatccat cgcggtcgct tctttctcgg tgatgccgaa
      121 gaagtcagca tcgaagcccg cgacgtcatc gaggaacgcc ccccacttac acgctgaccg
      181 gcccggcata ccgggctggg ggtcgtagta ctcgtcggcg tcccaccggt ccggcggaac
      241 ttcggtgacc aggtcgtcgc cgcgcagcag cgcctcccac aactggtctg gtgaggtgat
      301 gccaccgggc agccggcacg ccatgccgat gacggcgatg ggggtacgag gtgccttgac
      361 tagctgggcc gcggacatag ccgctcccgg gttcccaggc aggtgcggat tagcccgaac
      421 aaagccgttt cctcctcata gcaaaggtgg agtttcgctg tgggctgcct tatcgctggg
      481 tagcgaccgg tcagttgtcg gggatgttag cggatcacca ccggtccgcg gtggtatctg
      541 gaaacccagg ttgtgtccga gacaagagtt aactggaagt tctaacgggc ggccggcccg
      601 ccgtgaaagg gtgtgttatg catcgacgcc gcccgcgctt gaggcttgtg gagcctaggg
      661 gaatcgaacc cctgacaccc gccttgcaaa ggcggtgctc taccaactga gctaaggccc
      721 ctcatcgtga ccgagtggct gaccttggtc atccacagcc acgtgccaga cctcgacacc
      781 gcgtcgtgac cacgccaccg ctgccaatac ggcgataagt cccagcggca gtgcgagtct
      841 tacgcaacgt cttgacgggc acatggttgt gggcctagga ggactcgaac ctccgacctc
      901 ttcgttatca gcgaagcgct ctaaccgcct gagctatagg cccgtactcg cgtacggccg
      961 agcgacgaga ttaccgcaat ccgagcccga ctcccaaaag cgcagcactc acgctagtcg
     1021 cggtccgcca acgtgacctc gatgccgccg atcagatcgg tcgtcaggtt gtagatgaac
     1081 gcggcgatgg tggccgccgc ggtcagcaac acgatgttca ccaagccgat caggacggcg
     1141 ccgccgaaaa tcgtgccgct ggacaccagc tcgccgctgc tgccgctggt gtt
//
LOCUS       DASRPQ010002513         1075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_1251459, whole genome shotgun sequence.
ACCESSION   DASRPQ010002513 DASRPQ010000000
VERSION     DASRPQ010002513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1251459"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            99..1001
                     /locus_tag="VFD73_28165"
     CDS             99..1001
                     /locus_tag="VFD73_28165"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HZI77845.1"
                     /translation="MLVDPSNGGTRWPGTSTLPPGRRPHPQASPLRPPRVGVDFALGK
                     LAKRLSTRSVRLARMILIQAIRNAMVNDLVVRNVADLTAVPTGKPGRPSRSLNLVQAL
                     AVLDAAKEERLWPYVAVSMLGGIRTEEARALRWSEVDLEAGTVAVYRSVRRTGETKTE
                     KSRRVFQIPEIAVEALRDLVLKQAAARAKAGTAWKENDLVFCTSRGGPMYATDVRMEF
                     KRITEKAGLGLDWTPRELRHTFVSLLSDSGVPIEQIADAVGHSSTRTTEVVYRHQLRP
                     VTRTAAIALGPLFESRRETNGGQN"
BASE COUNT          202 a          333 c          363 g          177 t
ORIGIN      
        1 cgttcggctg accaaacccg cgacgcccgc tccgcacagc agggccagag ccagtcacca
       61 gcccatgact gcggctgcag gcgccggaaa gtgctgtcgt gctcgttgac ccaagcaatg
      121 gcgggacgcg ctggcccggt acgtcaacgc tgcccccggg tcggcggccg cacccgcagg
      181 ccagcccgct gcggccgccg cgggtcggcg tcgacttcgc tcttggcaag ctggctaagc
      241 gcctgtcaac caggagcgtt aggctggccc ggatgatcct gatccaggcc atccggaacg
      301 cgatggtcaa tgacctcgtg gtccgtaatg tggcggacct gactgctgta cctaccggaa
      361 aaccgggacg gccgtctagg tcactcaacc tggtgcaggc tctagccgtg ctggatgcag
      421 ctaaggaaga acgcctgtgg ccgtatgtcg ccgtgagtat gctcggcggc atccgcactg
      481 aggaggcccg cgccctgcgc tggtccgagg tggaccttga ggctggcacg gtggccgtct
      541 accgatcggt acggcgcacc ggggagacca agaccgagaa gtcgcggcgc gtattccaga
      601 ttcccgagat cgccgtagag gcgctgcggg acctggtcct gaagcaagcg gcggcccggg
      661 cgaaggccgg gacggcgtgg aaggagaacg acctggtgtt ctgcacgagc cgcggtggcc
      721 cgatgtacgc gaccgacgtc cggatggagt tcaagcgaat caccgagaag gcaggcctcg
      781 gcctggactg gacgccgcgc gagctgcgcc atacctttgt gtcgctcttg tcggattccg
      841 gtgtgcccat cgagcagatc gcggacgcgg taggccactc aagcacgagg acgaccgagg
      901 tcgtgtatag gcatcagctc cggccagtta cgcgtaccgc tgccattgcg ctcggtccgc
      961 tgttcgagag cagacgagag accaacggag gccaaaactg aaccgttagc cttccagtta
     1021 ggctaccaag atctttactg attggatggt aaggcttatg agcagcgaaa atagt
//
LOCUS       DASRPQ010002514         1559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3133513, whole genome shotgun sequence.
ACCESSION   DASRPQ010002514 DASRPQ010000000
VERSION     DASRPQ010002514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1559
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3133513"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..247
                     /locus_tag="VFD73_28170"
     CDS             <1..247
                     /locus_tag="VFD73_28170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77846.1"
                     /translation="MAMGRVFSIAAKFTDPDTYFVGGGVIEAAPHFRDWFVATVRENT
                     EFYPEQAEIAEITLVPDLDMAGARGSAIAAVAWVRSL"
     gene            complement(339..866)
                     /locus_tag="VFD73_28175"
     CDS             complement(339..866)
                     /locus_tag="VFD73_28175"
                     /inference="COORDINATES: protein motif:HMM:NF015648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HZI77847.1"
                     /translation="MGIRVVPNETVPAAVYRVLLPHERRVITVRFHPAILIRPVAETL
                     GGLAIAGLVSTLLHVSSTVLLIIWLLWLILVIRLLFRIYEWLEDYFVVTSARLLLATG
                     VIKKTVNMMPLSKVTDMRFERSPTGRLFGFGTFIVESAGQDQALHTIDHLPYPEQLYI
                     EVCGLIFKDPGSGDD"
     gene            complement(875..1030)
                     /locus_tag="VFD73_28180"
     CDS             complement(875..1030)
                     /locus_tag="VFD73_28180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77848.1"
                     /translation="MKPKQIIGYLAIAFAIWWLIQEPASAGHLIHNIGALLSQAAHGM
                     STFIASI"
     gene            1303..>1559
                     /locus_tag="VFD73_28185"
     CDS             1303..>1559
                     /locus_tag="VFD73_28185"
                     /inference="COORDINATES: protein motif:HMM:TIGR03941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77849.1"
                     /translation="MSETDFAIIVFREDDRWEADVLPVAVTGDLAGLVRVLRQQPSIA
                     GTIGLAGIDDYFFVAVRVIGSQVSLLLSDIGAALDYSLAEQV"
BASE COUNT          305 a          460 c          497 g          297 t
ORIGIN      
        1 gatggcgatg ggacgggtct tctccatcgc ggccaagttc accgaccccg acacctactt
       61 cgtcggcggt ggggtgatcg aggccgcgcc gcacttccgt gactggttcg tggccacggt
      121 cagggagaac acggagttct accccgagca ggcggagatc gcggagatca cgctggtgcc
      181 cgacctggac atggccggcg ctcgcgggtc ggccatcgcc gccgtcgcct gggtgaggag
      241 tttgtaatca ggcgcacgat gaacgagtgc atgccgtctg accaggccag actgcacgca
      301 cccgttcgga atgcttttgg tctttattgt ctttatcgct aatcgtcgcc cgatcccgga
      361 tctttgaaga tcagtccgca tacctcgatg taaagctgct cgggataggg cagatgatca
      421 atcgtgtgaa gggcttgatc ttgccccgcg gactcgacga tgaacgtgcc gaaaccgaac
      481 agccggccgg tcggcgaccg ttcgaaccgc atgtcagtga ccttggaaag cggcatcatg
      541 ttcacggtct tcttgatcac gccggtggcg agcagaagcc gtgctgatgt caccacgaag
      601 taatcttcca gccactcata gatacggaaa agtagcctga tgacgaggat gagccatagc
      661 agccagatga tgagcaggac agtgctgctg acgtgaagga gggtagagac caggccagcg
      721 atcgcgagcc cgccgagggt ctcggccact ggcctgatca ggattgccgg gtggaaccga
      781 acggtgatta cccgtcgctc gtgcggcaga agaacccggt aaacggcggc cgggactgtc
      841 tcgttcggaa cgaccctaat acccattgct aacctcagat cgaggcgatg aacgttgaca
      901 tgccgtgagc agcctgactg agcagcgccc cgatattgtg tatcagatga ccggcactag
      961 cgggctcttg gatcagccac catatggcaa aggctatggc caaatagccg atgatctgct
     1021 tgggtttcac tgccgcctcc ctggaagcgc agagtgctcc atctgccagt tccttaatcc
     1081 tagtccgaaa cggcttggat ggggggtttg acatccaagc aggtacggct ctggccatgc
     1141 ccgtccggca cacagtatgc ccgaaagtcg cgtccgctac tcatgtgcct ccgaggagaa
     1201 tgtgccgacc cgccaggcag tatccctctg ccccgcgcgc ggaagaagca gccacgccgg
     1261 catccccggc ggcggtatgt tcatactgtg gcgatgcctg aggtgagcga gacagacttt
     1321 gcgatcatcg tcttccgcga ggacgaccgg tgggaagccg acgtgctgcc ggtggcggtg
     1381 accggcgatc tggcggggct ggtccgcgtg ctgcggcaac agcccagcat cgccggaacg
     1441 atagggctcg ccgggatcga cgactatttc ttcgtggccg tccgggtcat cggcagccag
     1501 gtgtcactgc tgctgtccga catcggcgcg gcgctggact actcgctggc cgagcaggt
//
LOCUS       DASRPQ010002515         3035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_3134492, whole genome shotgun sequence.
ACCESSION   DASRPQ010002515 DASRPQ010000000
VERSION     DASRPQ010002515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3035
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3134492"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..840
                     /locus_tag="VFD73_28190"
     CDS             <1..840
                     /locus_tag="VFD73_28190"
                     /inference="COORDINATES: protein motif:HMM:NF024375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZI77850.1"
                     /translation="LPDADPGGTLATHLAEGCEVCTAEVRELRETATLLLLATEPVPP
                     PEALSQRVLDRIAGKSFEFVLSNEGTWRPAGQFETKVLYDGPLGSTSLISLPTGSWLA
                     DAYQPGHLGYVILRGELDGEGVRLNTADFVPAAGKVPGRRMAVVMDTVLLAVAGAVEA
                     EPLDSPRAVRASKAAWTPMEPGVSALPVAGSEADGIEISLLRLEPGAVVAKHRHDWVE
                     EFCLISGDCRCQGVELGPEDYHRAVPGTSHDATTSVGGCTMVYIIRKITSNRDRNTSV
                     SER"
     gene            complement(823..2487)
                     /locus_tag="VFD73_28195"
     CDS             complement(823..2487)
                     /locus_tag="VFD73_28195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77851.1"
                     /translation="MQFATSAYSFCLLCVAVTHLAAQEPATSPGQPTAETAAPPIYDN
                     LGTLHKEITTTSQLAQQYFDQGLRLTYAFNHDEAIKSFEQGVRHDSTCAMCYWGIAYA
                     LGPNINVPMDTSAMPAAYQAAQQALKYSADATPSERAYIEALATRYAAKPSPNRAPLD
                     SAWAKAIGLVAYAYPKDDDAATLYAEALMDLRPWNYWTNGGRAKAPSTYEQVRTLERV
                     LKRNPNHPGACHFYIHAIEASTEAAKALPCAHRLASLMPGAGHLVHMPSHIYIKLGQW
                     ELAAEDNEHAVHADEEFISERHPTGVYPIGYYPHNFHVMWYALNMLGRSEAAIKTAQQ
                     IAMKVPPEVIKQIPPFEYYSPTLLYTLARFSRWNEILKQPPPVKDLRFTTGMWHYVRA
                     LAYTATSRPDSAAAESDALAGIANATPAEEMMNLNSAKSLLAVAQAHLAGEMAAKAGR
                     IDDAITQLQLAVKAEDELTYDEPPAWYMPMRQRLGAILLEANRPKQAEKVFREDLTRR
                     PENGWSLAGLAQSLKAQNKQKEAAKIQARFEKAWSSADVQALSLAH"
     gene            2667..2739
                     /locus_tag="VFD73_28200"
     tRNA            2667..2739
                     /locus_tag="VFD73_28200"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2700..2702,aa:Ala,seq:cgc)
     gene            2756..2828
                     /locus_tag="VFD73_28205"
     tRNA            2756..2828
                     /locus_tag="VFD73_28205"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2789..2791,aa:Gln,seq:ctg)
BASE COUNT          525 a          865 c         1012 g          633 t
ORIGIN      
        1 cttccggacg ccgatccggg tgggacgctg gctacgcacc tggccgaggg ttgcgaggtc
       61 tgcaccgccg aggtgcggga gctccgggaa acggcaacgc ttctgctgct ggcaaccgag
      121 ccggtccccc cgccggaagc tctctcccag cgagtgttgg accgaatagc gggaaagagt
      181 ttcgagttcg tcctgtccaa cgaagggact tggcggccgg ccggacagtt cgaaaccaaa
      241 gtgctctacg atggtcctct aggcagcaca tcgttgatct cactgccgac aggatcatgg
      301 ttggccgacg cgtaccagcc ggggcatttg ggctacgtga tcctgcgcgg agagctcgat
      361 ggtgaaggag tccggctcaa tactgctgac ttcgtccccg ccgccggcaa ggtccccggc
      421 aggagaatgg cagtcgtcat ggatacggtg ctgctggcgg tggcgggagc ggttgaggcc
      481 gagccgctgg attctccccg cgcagtccgt gccagtaagg cggcatggac cccgatggaa
      541 ccgggggtat ctgctctgcc ggtcgcggga agcgaagccg acggtattga aatctcgctg
      601 ctgcgattgg agccgggcgc ggtcgtagcc aagcaccgcc acgactgggt cgaagagttt
      661 tgtcttattt caggagattg ccgctgccag ggagtggagc tcgggcctga agattaccac
      721 cgggcggtgc ccgggacgag ccatgatgcg accaccagtg tcggtggctg caccatggta
      781 tacatcatca ggaagatcac atcgaatcgc gaccggaata cttcagtgag cgagcgatag
      841 agcctgcacg tcggcgctgg accacgcctt ctcgaaacgc gcctggatct ttgctgcctc
      901 cttctgtttg ttctgcgcct tcaggctttg cgccaggccg gcaagtgacc atccgttttc
      961 aggacgacgc gtcaggtctt cccgaaacac tttctcggcc tgcttcggcc ggttcgcctc
     1021 caacaggata gcccccaggc gctggcgcat cggcatgtac caggccggcg gctcgtcgta
     1081 ggtgagctcg tcctccgctt tcaccgcaag ctgtagctgg gtaatcgcat cgtcgattct
     1141 gcctgctttc gccgccattt ctcctgccag gtgcgcctgg gcgaccgcca gcagactctt
     1201 ggcagaattc aggttcatca tctcctcggc cggcgtggca ttcgcgatgc ctgccagcgc
     1261 gtcactctcc gcggcagccg agtccggcct gctggtggcg gtgtaggcca gggccctgac
     1321 gtagtgccac attcccgtag tgaagcggag atctttcacc ggcggcggct gcttcaggat
     1381 ttcgttccag cgggagaatc tcgcgagcgt atagagcagg gtcggcgaat agtactcgaa
     1441 gggtggaatc tgcttgatca cctcaggcgg caccttcatg gcgatctgtt gcgccgtctt
     1501 gatagctgct tcgcttctgc ccagcatgtt cagggcatac cacattacgt gaaagttgtg
     1561 ggggtaatag ccgataggat acacgccggt ggggtgccgc tcgctgatga attcctcgtc
     1621 ggcgtggacc gcatgctcgt tgtcctcggc ggcgagctcc cactgaccca gcttgatgta
     1681 gatgtggctc ggcatgtgaa cgagatgacc ggcgcccggc atgagactgg cgagtcgatg
     1741 ggcacaggga agcgctttgg cggcctcggt tgaggcctcg atcgcatgaa tgtagaagtg
     1801 gcaggcaccg gggtgattcg ggttccgctt cagcacgcgt tccagggtcc gtacctgctc
     1861 gtatgtggac ggcgctttgg ctcttccgcc attcgtccag tagttccagg gacgaagatc
     1921 catcagcgcc tcggcgtaga gcgttgcagc gtcgtcgtcc ttggggtagg cgtaagccac
     1981 aagtccaatc gccttggccc aggcggaatc cagcggcgcg cgattgggag acggtttggc
     2041 ggcatagcgg gtggccaggg cctcgatgta ggcccgctcg gacggggtag cgtcggctga
     2101 gtatttgagc gcttgctgcg cggcctggta ggccgcgggc atggccgagg tatccatcgg
     2161 gacgttgatg ttgggaccga gtgcgtatgc gataccccaa tagcacatgg cacaggtcga
     2221 gtcatgcctc accccctgct cgaacgactt gatcgcctca tcgtgattga aggcgtaggt
     2281 caatcgaagg ccctggtcga agtactgctg cgctagctgg gaggttgtgg tgatctcttt
     2341 gtgcagagtg cccaggttgt cgtagatggg tggcgcggcc gtttcagcgg tcggttgccc
     2401 cggcgatgtc gcgggctcct gagcagccag gtgagttacg gcaacgcaca gtagacagaa
     2461 ggaataggcg ctggtggcga actgcatgac acatctcccg ggtgtgcgac actgaacatc
     2521 gagacctgaa cccggtgcgt cggttcagcg tcagactgga cagttggggg agctggggat
     2581 tccaaatatt aggacttcgg ggccaatgtg ccaccatttt ttggttgact gggcaggggg
     2641 tcgggcggta attttcgcgg cttcgtgggg ctgtagctca gctgggagag cgctgcaatc
     2701 gcactgcaga ggtcaggggt tcgatccccc tcagctccat ggaagcaaaa aactctgccc
     2761 cttggtgtaa ctggcaacac gcctgactct ggatcaggag agtcctggtt cgagcccagg
     2821 aggggcaatg gccggtgcaa gcgcaccggc cgttttgtat tgtggtcccg ttcttcagcg
     2881 agtgcgtcgc ttccagctca agcccaggag aggcaatggc tcccgcgatc gcgagagccg
     2941 tttttaatcg tgtcgtcctt gggcgatttt tgtgggcacc tcaggctgcg cgccttcgga
     3001 tcgagcccag aggcctgctc gcagtgcagg gcaag
//
LOCUS       DASRPQ010002516         1562 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2505190, whole genome shotgun sequence.
ACCESSION   DASRPQ010002516 DASRPQ010000000
VERSION     DASRPQ010002516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1562
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2505190"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            140..1555
                     /locus_tag="VFD73_28210"
     CDS             140..1555
                     /locus_tag="VFD73_28210"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZI77852.1"
                     /translation="MSQSAAVCPAWQETEAPASGDSHDAPLAPGTPAGTVSEATRERL
                     YQFVLPLLIQLDRHIDVRLVRTLWQAIEAMIQFRHRAHGLLLSELGAFLLSPDKAPAG
                     TKRLSNLLRCPKWSAELIERFLWQQARERHQALVEAGQTALLLWDASVLEKPESQRAE
                     GLCAVRSAKAARLKRIKPGFYTPPPGPAVFVPGLHWIALLLIGLSGPPTVAAMRWFST
                     RGKGTTDARAVQYALLQQCARSFGGAALHLFDRGYAGTPWLAALQQGRLRFVLRWPKH
                     YKLLSQEGTVKAAWQIARGQRSWDTRLLWDAKKRCLAPVGVLAMGVQHPEEPGPLSLV
                     VARRGRGQEPWYLLTSEPITNVEEAWQIVLSYARRYQIEMAFRFGKSELAMESPRLWT
                     WERRVKLLLLVTLAYAFLLSLLDEPLLWLREWLLRNYCHRTGKRSREVAAPLYRLRAA
                     LSRLWQDHPQPAAPRLALSSG"
BASE COUNT          260 a          529 c          493 g          280 t
ORIGIN      
        1 aggccaaagc ggtcgggcag aataaaaaca tgagtcatcc cgaactttga ggggttgacc
       61 gccaaccgac aaccaacaga agagacctgc gtcggtagac tgaagtcgtc caaactcagt
      121 caagacggag gtctcttcca tgtcacagtc tgccgcggtt tgccccgcat ggcaagaaac
      181 agaagcccct gcttccggcg actcccacga cgcgccgctg gcgccaggca ccccggccgg
      241 taccgtttcc gaagccaccc gtgaacggct ttaccagttt gtgctccctt tgcttatcca
      301 actcgaccga cacatcgatg tgcgcctggt gcgcaccctc tggcaagcca tcgaggccat
      361 gatccagttc cgccaccgtg cccacggtct gctgctctct gaactgggcg ccttcctgct
      421 ctcccccgac aaagccccgg ccggcaccaa gcgcctctct aacctgctgc gctgccccaa
      481 atggagcgcc gaactgatcg agcggtttct ctggcagcag gccagagagc gccatcaagc
      541 cctggtcgag gcgggccaga cggcactgct cctctgggat gcgagcgtct tggagaagcc
      601 ggaaagccag cgcgcggagg gattgtgtgc cgtccgttcg gccaaagcgg cgcgcctcaa
      661 gcgcatcaag cccggcttct acacgccgcc gccgggtccg gccgtcttcg tgccggggct
      721 gcactggatc gctctgcttc tgatcggcct gagcggaccg ccgacggttg cggccatgcg
      781 ctggttcagc acgcgtggca aagggactac cgatgcccgc gcggtgcagt acgctctgct
      841 ccaacagtgt gctcgctcct tcgggggtgc ggcactccat ctcttcgacc ggggctatgc
      901 cggcaccccc tggctggcgg ccctccagca ggggcggctg cgcttcgtgc tgcgttggcc
      961 caagcattac aaactgctgt cccaggaggg caccgtcaag gccgcctggc agatcgcgcg
     1021 gggacagcgc tcctgggaca cgcgcctgct ctgggacgcc aagaagcggt gcctcgcgcc
     1081 ggtcggtgtc ctagccatgg gcgtgcagca tcccgaggag cctggcccct tatccctggt
     1141 ggtggcgcgc cggggccgcg ggcaggagcc ctggtatctt ctgaccagcg agccgatcac
     1201 gaacgtggag gaggcttggc agatcgtgct ttcctacgcc cgccgatatc agatcgagat
     1261 ggctttccgc ttcggcaaga gcgagttggc tatggagagc cctcgcctct ggacctggga
     1321 gcggcgcgtc aagctgctgt tgctggtgac gctggcctat gcgttcctgc tctcgttgct
     1381 ggacgagccg ctgctctggc tcagagagtg gctgctgcgc aactactgcc accggacagg
     1441 aaaacggagc cgcgaggtgg cggctccgct ctatcgcctg cgcgcggcgc tcagccggct
     1501 ctggcaagat catcctcaac cggctgcccc gcggctggca ctaagttcgg gatgactcat
     1561 gt
//
LOCUS       DASRPQ010002517         1027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_2505450, whole genome shotgun sequence.
ACCESSION   DASRPQ010002517 DASRPQ010000000
VERSION     DASRPQ010002517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2505450"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(251..733)
                     /locus_tag="VFD73_28215"
     CDS             complement(251..733)
                     /locus_tag="VFD73_28215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77853.1"
                     /translation="MTNLRSLDPATAQTLTMAALIVMVQGGSTVLVNPQESVLKMLSH
                     TRTTEMFTIRPGHRPGPRRTPAPPADERRPAPMTEHEHELDGPIRLRRQPASLSNGHP
                     GGGTRTSTFEIICRECGDDPGLDYREISPGLRQIRGPYLLKAGIEAFLEHQDYHDWDG
                     "
BASE COUNT          137 a          324 c          350 g          216 t
ORIGIN      
        1 gacgggttat cagcttggga actggcttgt catgcttccc tgagcacact atttgcagtt
       61 cagaggctat ttgccttatc cggagtgccc gctacagacc gtctcagatc gtgctatcgg
      121 gcacgccagc gctcatcaca ggtcgtgccc gcattacccg gcatgccctc ggtgcgcccg
      181 gtcaggctcc gcggcatccg gggcggctcc gctcgcgctg aagccgggcc gggcatggcg
      241 agtgcctgtc tcatccgtcc cagtcgtggt aatcctggtg ctccaggaac gcttcgatac
      301 cggccttgag caggtagggt ccgcggatct ggcgcagccc gggtgagatc tcccggtaat
      361 ccaggccggg atcgtcgccg cattcgcggc agataatctc gaacgtgctg gtgcgggtgc
      421 cgcctcctgg gtggccgttg ctgaggctgg ccggctggcg ccggagcctg atcggcccgt
      481 ccagctcgtg ctcgtgctca gtcattggcg cgggtctcct ctcgtccgct ggcggagctg
      541 gcgtccggcg cggtcccggc cggtgtccgg gccggatcgt gaacatctcg gttgtgcgcg
      601 tgtggctcag catcttcagt acggattcct gcgggttcac tagcaccgtg ctgccgcctt
      661 ggaccatgac gatcagcgcg gccatcgtca gggtctgcgc cgttgcgggg tcgagggagc
      721 gcaggttcgt cacgtcgata gtcaggtgag tggtccaggg cgatacctgg acggtgaggg
      781 ctgcgtctag ttcctggccg gtgagtcgtc tgcgtcgcca gccaggacga tgaccgggcc
      841 gaggtccccc gcctcgacgg atacttccag caagcccacg atgacacctc cccggccgct
      901 cgtttagtga gatttattat tattttacag ggtatccggg atccgtgctg ggtgctctct
      961 cgggcagggg ttcaggagcc gcccgttctc agcggcgaga aggtccgccg cgcgctgtcc
     1021 gggcctg
//
LOCUS       DASRPQ010002518         1158 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U10299
            k141_4385335, whole genome shotgun sequence.
ACCESSION   DASRPQ010002518 DASRPQ010000000
VERSION     DASRPQ010002518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37963824
            Sequence Read Archive: SRR5689334
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 22:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,492
            Genes (coding)                    :: 5,441
            CDSs (with protein)               :: 5,441
            Genes (RNA)                       :: 152
            rRNAs                             :: 2, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 37 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 3 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4385335"
                     /isolate="SMAG_U10299"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="33.8834 N 83.4195 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(611..1012)
                     /locus_tag="VFD73_28220"
     CDS             complement(611..1012)
                     /locus_tag="VFD73_28220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZI77854.1"
                     /translation="MTNHDLGADQFTFAGDRTRINYETQTPIPGQGPLLQYQGPEGDH
                     TFTGDQVTCLDSALGTLLTVVLRPDADAGAISITVLVPKAFGVTRENPVTFGTIAIKT
                     TSRGFINTPGMELTYDVLPLVGQAHQVIQPA"
BASE COUNT          187 a          345 c          388 g          238 t
ORIGIN      
        1 cacgcgcagc cattaaaagc gacataagcg gcgaatctgg acgcctgcca accggcccgg
       61 cgccagtact tgaccaacgc agagtcggcg ttatgaagcg gattgcggcc gatagatcgc
      121 gatttgttaa ttgcattctg ttattgtctc gtcgggctcc gaccacaagg ggtcgctgga
      181 ctacggggtc ggcgtctgcg tgctccaaag cactgctcga caggtggtcg gctggttcgg
      241 gagctggcat aggtgaagta gcccgcgcgg cgaattggcc tgtcccctgc ccgccatagg
      301 gtggcgcccg gttctggggc atcgtggctg agctgatcgc cagtggcgtg gtcgtgcagg
      361 gcggcaaggg ctacatcggc gaggccggcc tcccagaagg aagccaaccg ggttcaggtc
      421 cggcgccgca cccaggggac gtgccgatgc ccagctcaag tccgggcgca tcttacgtga
      481 actccgctgc tggccttggc gccgggcagc tggctgaggc gatccgcgtt cttcaggccc
      541 gcgaaaccgg gagatggaag acgctcaggg cttgcggaag ctaccgggag tccttgacgt
      601 cgcgtgcttg ctacgcgggc tggattacct gatgcgcctg tcccacgagc ggtagtacgt
      661 cgtatgtcag ctccatgccg ggtgtgttta tgaagccgcg gctcgtggtc ttgattgcta
      721 tggttccgaa ggtcaccggg ttctcgcgtg tgacaccgaa tgctttcggt accaggacgg
      781 tgatgctgat cgcgccggca tcggcgtccg gccgcaggac gacggtcagc agtgtcccca
      841 gggcactgtc caggcaggtc acctgatcgc cggtgaaggt gtggtcccct tcgggaccct
      901 gatactggag caggggccct tggcccggga taggcgtttg cgtctcgtaa tttatcctgg
      961 tccggtcccc ggcaaaagta aactggtccg cgccgaggtc atggttggtc attagcgaat
     1021 cccttcatac gggcggatcg caagccctga tcttcctgtc atctcttgaa tgtgtcaggc
     1081 aggcgcctca cggccggccg cttctgtgct gcgaattcgc gctctgccgc ctcggccatc
     1141 tcgaggtcag tgccagct
//
